19/01/2012 04:32:04 : INFO  : Run start: Thu Jan 19 04:32:02 GMT 2012
19/01/2012 04:32:16 : INFO  : Initialised job
19/01/2012 04:32:19 : INFO  : Renaming log file 'phyre2_20120119_043201.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/eea07ff7af1f1a9e/phyre_20120119_043201.log'
19/01/2012 04:32:22 : INFO  : Initialised job:
Sequence
>batch____
MTDQAEKKHSAFWGVMVIAGTVIGGGMFALPVDLAGAWFFWGAFILIIAWFSMLHSGLLL
LEANLNYPVGSSFNTITKDLIGNTWNIISGITVAFVLYILTYAYISANGAIISETISMNL
GYHANPRIVGICTAIFVASVLWLSSLAASRITSLFLGLKIISFVIVFGSFFFQVDYSILR
DATSSTAGTSYFPYIFMALPVCLASFGFHGNIPSLIICYGKRKDKLIKSVVFGSLLALVI
YLFWLYCTMGNIPRESFKAIISSGGNVDSLVKSFLGTKQHGIIEFCLLVFSNLAVASSFF
GVTLGLFDYLADLFKIDNSHGGRFKTVLLTFLPPALLYLIFPNGFIYGIGGAGLCATIWA
VIIPAVLAIKARKKFPNQMFTVWGGNLIPAIVILFGITVILCWFGNVFNVLPKFG

19/01/2012 04:32:24 : INFO  : Checked sequence
19/01/2012 04:32:29 : INFO  : Finding homologues with PSI-BLAST
19/01/2012 04:32:31 : INFO  : PSI-BLAST 3 iterations
19/01/2012 04:35:08 : INFO  : PSI-BLAST 5 iterations
19/01/2012 04:39:58 : INFO  : Finished PSI-BLAST
19/01/2012 04:40:02 : INFO  : Running Buildali to generate a3m file
19/01/2012 05:08:25 : INFO  : Converting to HMM
19/01/2012 05:08:37 : INFO  : Calibrating HMM
19/01/2012 05:08:59 : INFO  : Searching HMM database
19/01/2012 05:16:48 : INFO  : Finished buildali
19/01/2012 05:16:51 : INFO  : Predicting secondary structure
19/01/2012 05:17:07 : INFO  : Predicted secondary structure (PSI-Pred)
19/01/2012 05:17:10 : INFO  : Predicting Disordered regions
19/01/2012 05:17:18 : INFO  : Predicted Disorder (Disopred)
19/01/2012 05:17:21 : INFO  : Running memsat_svm check
19/01/2012 05:21:40 : INFO  : Globular protein
19/01/2012 05:21:42 : INFO  : Predicted Transmembrane (memsat_svm) ID 'eea07ff7af1f1a9e'
19/01/2012 05:21:45 : INFO  : Initialising fold library search
19/01/2012 05:21:54 : INFO  : Initialised search input
19/01/2012 05:21:58 : INFO  : Building Ensemble models
19/01/2012 05:22:05 : INFO  : Building hh.c3giaA_.model.1.pdb
19/01/2012 05:22:34 : INFO  : Building hh.c3lrcC_.model.2.pdb
19/01/2012 05:22:57 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/eea07ff7af1f1a9e/hh.c3lrcC_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/eea07ff7af1f1a9e/c3lrcC_.2.pdb
19/01/2012 05:23:05 : INFO  : Building c3giaA_.1.pdb
19/01/2012 05:23:32 : INFO  : Building c3lrcC_.2.pdb
19/01/2012 05:23:59 : INFO  : Building c2jlnA_.3.pdb
19/01/2012 05:24:28 : INFO  : Building c2xq2A_.4.pdb
19/01/2012 05:24:55 : INFO  : Building c3dh4A_.5.pdb
19/01/2012 05:25:21 : INFO  : Building d2a65a1.6.pdb
19/01/2012 05:25:49 : INFO  : Building c2w8aC_.7.pdb
19/01/2012 05:26:17 : INFO  : Building c3hfxA_.8.pdb
19/01/2012 05:26:44 : INFO  : Building d1llca1.9.pdb
19/01/2012 05:27:11 : INFO  : Building d1s0ya_.10.pdb
19/01/2012 05:27:37 : INFO  : Building c1byyA_.11.pdb
19/01/2012 05:28:04 : INFO  : Building c3qe7A_.12.pdb
19/01/2012 05:28:31 : INFO  : Building d1v92a_.13.pdb
19/01/2012 05:28:58 : INFO  : Building c1llcA_.14.pdb
19/01/2012 05:29:26 : INFO  : Building c1ar1B_.15.pdb
19/01/2012 05:29:53 : INFO  : Building c1qleB_.16.pdb
19/01/2012 05:30:21 : INFO  : Building d1xg8a_.17.pdb
19/01/2012 05:30:47 : INFO  : Building c1m57H_.18.pdb
19/01/2012 05:31:15 : INFO  : Building d3dtub2.19.pdb
19/01/2012 05:31:42 : INFO  : Building c2an7A_.20.pdb
19/01/2012 05:33:08 : INFO  : Finished HH model building
19/01/2012 05:33:11 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
19/01/2012 05:34:23 : INFO  : html domain output complete ID 'eea07ff7af1f1a9e'
19/01/2012 06:31:45 : INFO  : Run end  : Thu Jan 19 06:31:43 GMT 2012
