Phyre 2 alignment of P45549 with d1dzfa1

Return to main results | Retrieve Phyre Job Id

Job Description | P45549
Confidence | 8.11% | Date | Thu Jan 5 12:03:06 GMT 2012
Rank | 80 | Aligned Residues | 13
% Identity | 15% | Template | d1dzfa1
SCOP info | Restriction endonuclease-like | Eukaryotic RPB5 N-terminal domain | Eukaryotic RPB5 N-terminal domain
Resolution | 1.9

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 110 | . | . | . | . | . | . | . | . | . | 120 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | R | V | E | Q | A | L | V | S | A | G | W | Q | V
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | T | V | K | E | M | V | K | D | R | G | Y | F | I
Template Known Secondary structure |  |  |  |  |  |  |  |  |  | T | T | B |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 18 | . | 20 | . | . | . | . | . | . | . | . | . | 30

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions