Phyre 2 alignment of P45549 with c3e20C_

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Job Description | P45549
Confidence | 14.43% | Date | Thu Jan 5 12:03:06 GMT 2012
Rank | 54 | Aligned Residues | 24
% Identity | 8% | Template | c3e20C_
PDB info | PDB header:translation | Chain: C: PDB Molecule:eukaryotic peptide chain release factor subunit 1; | PDBTitle: crystal structure of s.pombe erf1/erf3 complex
Resolution | 3.50 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 314 | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . |  |  |  |  |  |  | . | 330 | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
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Query Sequence |  | Q | V | V | D | R | N | L | A | R | L | V | E | A | M | Q | . | . | . | . | . | . | P | D | D | C | L | V | V | M | A
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | S | V | L | S | A | I | T | S | T | R | E | R | L | K | L | Y | N | K | V | P | D | N | G | L | V | I | Y | C | G
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  | S | S |  | T | T | S |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 66 | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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