19/01/2012 06:40:14 : INFO  : Run start: Thu Jan 19 06:40:13 GMT 2012
19/01/2012 06:40:20 : INFO  : Initialised job
19/01/2012 06:40:21 : INFO  : Renaming log file 'phyre2_20120119_064013.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/ee989aa13feb61d4/phyre_20120119_064013.log'
19/01/2012 06:40:22 : INFO  : Initialised job:
Sequence
>batch____
MARFVVLVIDSFGVGAMKDVTLVRPQDAGANTCGHILSQLPHLQLPTLETLGLINALGYA
PGDMQPSDSATWGVAELQHEGGDTFMGHQEILGTRPLPPLRMPFRDVIDRVEQALVSAGW
QVERRGDDLQFLWVNQAVAIGDNLEADLGQVYNITANLSVISFDDAIKIGRIVREQVQVG
RVITFGGLLTDSQRILDAAESKEGRFIGINAPRSGAYDNGFQVVHMGYGVDEKVQVPQKL
YEAGVPTVLVGKVADIVNNPYGVSWQNLVDSQRIMDITLNEFNTHPTAFICTNIQETDLA
GHAEDVARYAERLQVVDRNLARLVEAMQPDDCLVVMADHGNDPTIGHSHHTREVVPVLVY
QQGMIATQLGVRTTLSDVGATVCEFFRAPPPQNGRSFLSSLRFAGDTL

19/01/2012 06:40:22 : INFO  : Checked sequence
19/01/2012 06:40:24 : INFO  : Finding homologues with PSI-BLAST
19/01/2012 06:40:26 : INFO  : PSI-BLAST 3 iterations
19/01/2012 06:42:23 : INFO  : PSI-BLAST 5 iterations
19/01/2012 06:45:26 : INFO  : Finished PSI-BLAST
19/01/2012 06:45:27 : INFO  : Running Buildali to generate a3m file
19/01/2012 06:55:44 : INFO  : Converting to HMM
19/01/2012 06:55:50 : INFO  : Calibrating HMM
19/01/2012 06:56:08 : INFO  : Searching HMM database
19/01/2012 07:07:09 : INFO  : Finished buildali
19/01/2012 07:07:10 : INFO  : Predicting secondary structure
19/01/2012 07:07:17 : INFO  : Predicted secondary structure (PSI-Pred)
19/01/2012 07:07:19 : INFO  : Predicting Disordered regions
19/01/2012 07:07:22 : INFO  : Predicted Disorder (Disopred)
19/01/2012 07:07:23 : INFO  : Running memsat_svm check
19/01/2012 07:09:59 : INFO  : Running memsat_svm full
19/01/2012 07:15:59 : INFO  : Predicted Transmembrane (memsat_svm) ID 'ee989aa13feb61d4'
19/01/2012 07:16:02 : INFO  : Initialising fold library search
19/01/2012 07:16:05 : INFO  : Initialised search input
19/01/2012 07:16:06 : INFO  : Building Ensemble models
19/01/2012 07:16:12 : INFO  : Building hh.c3m8yC_.model.1.pdb
19/01/2012 07:16:24 : INFO  : Building hh.c2i09A_.model.2.pdb
19/01/2012 07:16:34 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/ee989aa13feb61d4/hh.c2i09A_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/ee989aa13feb61d4/c2i09A_.2.pdb
19/01/2012 07:16:38 : INFO  : Building c3m8yC_.1.pdb
19/01/2012 07:16:53 : INFO  : Building c2i09A_.2.pdb
19/01/2012 07:17:04 : INFO  : Building d1p49a_.3.pdb
19/01/2012 07:17:15 : INFO  : Building c3b5qB_.4.pdb
19/01/2012 07:17:28 : INFO  : Building d1auka_.5.pdb
19/01/2012 07:17:40 : INFO  : Building c2zktB_.6.pdb
19/01/2012 07:17:50 : INFO  : Building c3ed4A_.7.pdb
19/01/2012 07:18:02 : INFO  : Building d1hdha_.8.pdb
19/01/2012 07:18:14 : INFO  : Building c2vqrA_.9.pdb
19/01/2012 07:18:24 : INFO  : Building c2qzuA_.10.pdb
19/01/2012 07:18:36 : INFO  : Building d1fsua_.11.pdb
19/01/2012 07:18:47 : INFO  : Building d2i09a1.12.pdb
19/01/2012 07:19:01 : INFO  : Building c3lxqB_.13.pdb
19/01/2012 07:19:12 : INFO  : Building c2w8dB_.14.pdb
19/01/2012 07:19:22 : INFO  : Building c2w5tA_.15.pdb
19/01/2012 07:19:34 : INFO  : Building d1o98a2.16.pdb
19/01/2012 07:19:46 : INFO  : Building c3q3qA_.17.pdb
19/01/2012 07:19:58 : INFO  : Building c2gsoB_.18.pdb
19/01/2012 07:20:08 : INFO  : Building c3szzA_.19.pdb
19/01/2012 07:20:19 : INFO  : Building d1ei6a_.20.pdb
19/01/2012 07:21:00 : INFO  : Finished HH model building
19/01/2012 07:21:03 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
19/01/2012 07:21:49 : INFO  : html domain output complete ID 'ee989aa13feb61d4'
19/01/2012 09:48:06 : INFO  : Run end  : Thu Jan 19 09:48:05 GMT 2012
