200 c1nu5A_ Probab=91.93   E-value=1.1  Score=24.77  Aligned_columns=114  Identities=17%

Q ss_pred             HHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHH---
Q ss_conf             99999997089868721002998999999999999998579849888655036777765432212269989999999---
Q batch____        88 DDIRRKVHAGVRSAMIDGSHFPFAENVKLVKSVVDFCHSQDCSVEAELGRLGGVEDDMSVDAESAFLTDPQEAKRFV---  164 (286)
Q Consensus        88 e~i~~Ai~~GftSVMiDgS~lp~eeNi~~T~~vv~~Ah~~gv~VEaElG~vgg~e~~~~~~~~~~~yT~peea~~Fv---  164 (286)
                      +.+.+..+.||+.+=+-.+..++++-+++.+.+.+..               |.+-..-.+.+...  ++++|.+|.   
T Consensus       149 ~~~~~~~~~G~~~~KiKvg~~~~~~d~~~i~avr~~~---------------g~~~~l~vDaN~~~--~~~~A~~~~~~l  211 (369)
T c1nu5A_         149 SALEMIETRRHNRFKVKLGARTPAQDLEHIRSIVKAV---------------GDRASVRVDVNQGW--DEQTASIWIPRL  211 (369)
T ss_dssp             HHHHHHHTTSCSEEEEECSSSCHHHHHHHHHHHHHHH---------------GGGCEEEEECTTCC--CHHHHHHHHHHH
T ss_pred             HHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHC---------------CCCCEEEEECCCCC--CHHHHHHHHHHC
T ss_conf             9999999669989999568999899999999999973---------------99969999879898--999999998620


Q ss_pred             HHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCEEE
Q ss_conf             88579899885262248889986418899999998619989995588989899999996198289
Q batch____       165 ELTGVDSLAVAIGTAHGLYSKTPKIDFQRLAEIREVVDVPLVLHGASDVPDEFVRRTIELGVTKV  229 (286)
Q Consensus       165 ~~TgvD~LAvaiGt~HG~y~~~p~Ld~d~L~~I~~~~~vPLVLHGgSG~~~e~~~~ai~~Gi~Ki  229 (286)
                      ++-+++++=          -.-|.-|++.++++++.+++|+.+ |-|=...++++++++.|.+.+
T Consensus       212 ~~~~~~~iE----------eP~~~~d~~~~~~l~~~~~ipIa~-dE~~~~~~~~~~~i~~~~~d~  265 (369)
T c1nu5A_         212 EEAGVELVE----------QPVPRANFGALRRLTEQNGVAILA-DESLSSLSSAFELARDHAVDA  265 (369)
T ss_dssp             HHHTCCEEE----------CCSCTTCHHHHHHHHHHCSSEEEE-STTCCSHHHHHHHHHTTCCSE
T ss_pred             CCCCCEEEE----------CCCCCCCHHHHHHHHHHCCCCEEC-CCCCCCHHHHHHHHHCCCCCE
T ss_conf             007737998----------799814888899999874994984-887688999999998289988