Phyre 2 alignment of P31666 with d2hgca1

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Job Description | P31666
Confidence | 53.33% | Date | Thu Jan 5 11:48:29 GMT 2012
Rank | 260 | Aligned Residues | 22
% Identity | 18% | Template | d2hgca1
SCOP info | DNA/RNA-binding 3-helical bundle | "Winged helix" DNA-binding domain | YjcQ-like
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 192 | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | .
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Query Sequence |  | T | T | T | S | V | R | A | F | N | N | Q | M | A | W | L | R | D | R | G | Y | A | T
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Template Sequence |  | I | G | V | T | E | D | Q | F | D | D | A | V | N | F | L | K | R | E | G | Y | I | I
Template Known Secondary structure |  |  | T | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 26 | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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