Phyre 2 Results for P31666

Phyre Home | Retrieve Phyre Job Id

Email | l.a.kelley@imperial.ac.uk
Description | P31666
Date | Thu Jan 5 11:48:29 GMT 2012
Unique Job ID | eda3e1311e20fe7b

Summary |

Top model
Image coloured by rainbow N → C terminus
| Close Jmol

Model (left) based on template d2j13a1
Top template information
Fold:7-stranded beta/alpha barrel Superfamily:Glycoside hydrolase/deacetylase Family:NodB-like polysaccharide deacetylase
Confidence and coverage
Confidence: | 99.9% | Coverage: | 41%
169 residues ( 41% of your sequence) have been modelled with 99.9% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
347 residues ( 85%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
3D viewing
Interactive 3D view in Jmol

Sequence analysis |

Secondary structure and disorder prediction |

|  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60
Sequence |  | M | Y | K | Q | A | V | I | L | L | L | M | L | F | T | A | S | V | S | A | A | L | P | A | R | Y | M | Q | T | I | E | N | A | A | V | W | A | Q | I | G | D | K | M | V | T | V | G | N | I | R | A | G | Q | I | I | A | V | E | P | T | A
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? | ? |  | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120
Sequence |  | A | S | Y | Y | A | F | N | F | G | F | G | K | G | F | I | D | K | G | H | L | E | P | V | Q | G | R | Q | K | V | E | D | G | L | G | D | L | N | K | P | L | S | N | Q | N | L | V | T | W | K | D | T | P | V | Y | N | A | P | S | A | G
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? |  | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? |  | ? | ? |  |  |  | ? |  | ? |  |  |  |  | ? |  |  | ? | ? |  |  |  |  |  | ? | ? | ? | ?
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180
Sequence |  | S | A | P | F | G | V | L | A | D | N | L | R | Y | P | I | L | H | K | L | K | D | R | L | N | Q | T | W | Y | Q | I | R | I | G | D | R | L | A | Y | I | S | A | L | D | A | Q | P | D | N | G | L | S | V | L | T | Y | H | H | I | L | R
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  | ? | ? |  | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? | ? |  | ? |  | ? | ? | ? |  | ? | ? |  |  | ? |  | ? | ? | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240
Sequence |  | D | E | E | N | T | R | F | R | H | T | S | T | T | T | S | V | R | A | F | N | N | Q | M | A | W | L | R | D | R | G | Y | A | T | L | S | M | V | Q | L | E | G | Y | V | K | N | K | I | N | L | P | A | R | A | V | V | I | T | F | D | D
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  | ? |  | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300
Sequence |  | G | L | K | S | V | S | R | Y | A | Y | P | V | L | K | Q | Y | G | M | K | A | T | A | F | I | V | T | S | R | I | K | R | H | P | Q | K | W | N | P | K | S | L | Q | F | M | S | V | S | E | L | N | E | I | R | D | V | F | D | F | Q | S
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360
Sequence |  | H | T | H | F | L | H | R | V | D | G | Y | R | R | P | I | L | L | S | R | S | E | H | N | I | L | F | D | F | A | R | S | R | R | A | L | A | Q | F | N | P | H | V | W | Y | L | S | Y | P | F | G | G | F | N | D | N | A | V | K | A | A
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | .
Sequence |  | N | D | A | G | F | H | L | A | V | T | T | M | K | G | K | V | K | P | G | D | N | P | L | L | L | K | R | L | Y | I | L | R | T | D | S | L | E | T | M | S | R | L | V | S | N | Q | P | Q | G
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? | ?
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |

Confidence Key
High(9) |  |  |  |  |  |  |  |  |  |  | Low (0)

? | Disordered
| Alpha helix
| Beta strand

Domain analysis |

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank | Aligned region
--- | ---
1 |
| d2j13a1 |

### PDB 2j13 chain A domain 1

Region: 209 - 403
Aligned: 169
Modelled: 195
Confidence: 99.9%
Identity: 20%
Fold: 7-stranded beta/alpha barrel
Superfamily: Glycoside hydrolase/deacetylase
Family: NodB-like polysaccharide deacetylase

Phyre2
2 |
| d2iw0a1 |

### PDB 2iw0 chain A domain 1

Region: 227 - 368
Aligned: 126
Modelled: 142
Confidence: 99.9%
Identity: 21%
Fold: 7-stranded beta/alpha barrel
Superfamily: Glycoside hydrolase/deacetylase
Family: NodB-like polysaccharide deacetylase

Phyre2
3 |
| d2cc0a1 |

### PDB 2cc0 chain A domain 1

Region: 231 - 367
Aligned: 116
Modelled: 137
Confidence: 99.9%
Identity: 22%
Fold: 7-stranded beta/alpha barrel
Superfamily: Glycoside hydrolase/deacetylase
Family: NodB-like polysaccharide deacetylase

Phyre2
4 |
| c1w17A_ |

### PDB 1w17 chain A

Region: 226 - 368
Aligned: 122
Modelled: 143
Confidence: 99.9%
Identity: 21%
PDB header:hydrolase
Chain: A: PDB Molecule:probable polysaccharide deacetylase pdaa;
PDBTitle: structure of bacillus subtilis pdaa, a family 42 carbohydrate esterase.

Phyre2
5 |
| c2iw0A_ |

### PDB 2iw0 chain A

Region: 230 - 368
Aligned: 123
Modelled: 139
Confidence: 99.9%
Identity: 21%
PDB header:hydrolase
Chain: A: PDB Molecule:chitin deacetylase;
PDBTitle: structure of the chitin deacetylase from the fungal2 pathogen colletotrichum lindemuthianum

Phyre2
6 |
| c2c1iA_ |

### PDB 2c1i chain A

Region: 214 - 368
Aligned: 131
Modelled: 155
Confidence: 99.9%
Identity: 20%
PDB header:hydrolase
Chain: A: PDB Molecule:peptidoglycan glcnac deacetylase;
PDBTitle: structure of streptococcus pnemoniae peptidoglycan2 deacetylase (sppgda) d 275 n mutant.

Phyre2
7 |
| d1ny1a_ |

### PDB 1ny1 chain A

Region: 226 - 368
Aligned: 122
Modelled: 143
Confidence: 99.9%
Identity: 21%
Fold: 7-stranded beta/alpha barrel
Superfamily: Glycoside hydrolase/deacetylase
Family: NodB-like polysaccharide deacetylase

Phyre2
8 |
| c2w3zA_ |

### PDB 2w3z chain A

Region: 213 - 380
Aligned: 148
Modelled: 153
Confidence: 99.9%
Identity: 23%
PDB header:hydrolase
Chain: A: PDB Molecule:putative deacetylase;
PDBTitle: structure of a streptococcus mutans ce4 esterase

Phyre2
9 |
| c2vyoA_ |

### PDB 2vyo chain A

Region: 231 - 368
Aligned: 121
Modelled: 127
Confidence: 99.9%
Identity: 14%
PDB header:hydrolase
Chain: A: PDB Molecule:chitooligosaccharide deacetylase;
PDBTitle: chitin deacetylase family member from encephalitozoon2 cuniculi

Phyre2
10 |
| d2c1ia1 |

### PDB 2c1i chain A domain 1

Region: 232 - 365
Aligned: 113
Modelled: 134
Confidence: 99.8%
Identity: 20%
Fold: 7-stranded beta/alpha barrel
Superfamily: Glycoside hydrolase/deacetylase
Family: NodB-like polysaccharide deacetylase

Phyre2
11 |
| d2c71a1 |

### PDB 2c71 chain A domain 1

Region: 232 - 365
Aligned: 114
Modelled: 122
Confidence: 99.8%
Identity: 18%
Fold: 7-stranded beta/alpha barrel
Superfamily: Glycoside hydrolase/deacetylase
Family: NodB-like polysaccharide deacetylase

Phyre2
12 |
| c3rxzA_ |

### PDB 3rxz chain A

Region: 230 - 374
Aligned: 124
Modelled: 141
Confidence: 99.7%
Identity: 24%
PDB header:hydrolase
Chain: A: PDB Molecule:polysaccharide deacetylase;
PDBTitle: crystal structure of putative polysaccharide deacetylase from2 mycobacterium smegmatis

Phyre2
13 |
| c3npfB_ |

### PDB 3npf chain B

Region: 22 - 168
Aligned: 134
Modelled: 147
Confidence: 99.6%
Identity: 18%
PDB header:hydrolase
Chain: B: PDB Molecule:putative dipeptidyl-peptidase vi;
PDBTitle: crystal structure of a putative dipeptidyl-peptidase vi (bacova_00612)2 from bacteroides ovatus at 1.72 a resolution

Phyre2
14 |
| c3qbuD_ |

### PDB 3qbu chain D

Region: 233 - 378
Aligned: 125
Modelled: 146
Confidence: 99.6%
Identity: 20%
PDB header:hydrolase
Chain: D: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of putative peptidoglyacn deactelyase (hp0310) from2 helicobacter pylori

Phyre2
15 |
| c1xovA_ |

### PDB 1xov chain A

Region: 27 - 167
Aligned: 129
Modelled: 140
Confidence: 99.6%
Identity: 10%
PDB header:hydrolase
Chain: A: PDB Molecule:ply protein;
PDBTitle: the crystal structure of the listeria monocytogenes bacteriophage psa2 endolysin plypsa

Phyre2
16 |
| d1z7aa1 |

### PDB 1z7a chain A domain 1

Region: 228 - 374
Aligned: 126
Modelled: 147
Confidence: 99.5%
Identity: 14%
Fold: 7-stranded beta/alpha barrel
Superfamily: Glycoside hydrolase/deacetylase
Family: PA1517-like

Phyre2
17 |
| c3s6oD_ |

### PDB 3s6o chain D

Region: 225 - 374
Aligned: 128
Modelled: 150
Confidence: 99.5%
Identity: 13%
PDB header:hydrolase
Chain: D: PDB Molecule:polysaccharide deacetylase family protein;
PDBTitle: crystal structure of a polysaccharide deacetylase family protein from2 burkholderia pseudomallei

Phyre2
18 |
| d2nlya1 |

### PDB 2nly chain A domain 1

Region: 232 - 369
Aligned: 117
Modelled: 124
Confidence: 99.4%
Identity: 10%
Fold: 7-stranded beta/alpha barrel
Superfamily: Glycoside hydrolase/deacetylase
Family: Divergent polysaccharide deacetylase

Phyre2
19 |
| c2krsA_ |

### PDB 2krs chain A

Region: 26 - 93
Aligned: 68
Modelled: 68
Confidence: 99.2%
Identity: 12%
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:probable enterotoxin;
PDBTitle: solution nmr structure of sh3 domain from cpf_0587 (fragment2 415-479) from clostridium perfringens. northeast structural3 genomics consortium (nesg) target cpr74a.

Phyre2
20 |
| c2kt8A_ |

### PDB 2kt8 chain A

Region: 20 - 90
Aligned: 71
Modelled: 71
Confidence: 99.2%
Identity: 8%
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:probable surface protein;
PDBTitle: solution nmr structure of the cpe1231(468-535) protein from2 clostridium perfringens, northeast structural genomics3 consortium target cpr82b

Phyre2
21 |
22 |
23 |
24 |
25 |
26 |
27 |
28 |
29 |
30 |
31 |
| c3m1uB_ |

### PDB 3m1u chain B

Region: 23 - 203
Aligned: 155
Modelled: 149
Confidence: 97.7%
Identity: 17%
PDB header:hydrolase
Chain: B: PDB Molecule:putative gamma-d-glutamyl-l-diamino acid endopeptidase;
PDBTitle: crystal structure of a putative gamma-d-glutamyl-l-diamino acid2 endopeptidase (dvu_0896) from desulfovibrio vulgaris hildenborough at3 1.75 a resolution

Phyre2
32 |
33 |
34 |
35 |
36 |
37 |
38 |
39 |
40 |
41 |
42 |
43 |
44 |
45 |
46 |
47 |
48 |
49 |
50 |
51 |
52 |
53 |
54 |
55 |
56 |
57 |
58 |
59 |
60 |
61 |
62 |
63 |
64 |
65 |
66 |
67 |
68 |
69 |
70 |
71 |
72 |
73 |
74 |
75 |
76 |
77 |
78 |
79 |
80 |
81 |
82 |
83 |
84 |
85 |
86 |
87 |
88 |
89 |
90 |
91 |
92 |
93 |
94 |
95 |
96 |
97 |
98 |
99 |
100 |
101 |
102 |
103 |
104 |
105 |
106 |
107 |
108 |
109 |
110 |
111 |
112 |
113 |
114 |
115 |
116 |
117 |
118 |
119 |
120 |
121 |
122 |
123 |
124 |
125 |
126 |
127 |
128 |
129 |
130 |
131 |
132 |
133 |
134 |
135 |
136 |
137 |
138 |
139 |
140 |
141 |
142 |
143 |
144 |
145 |
146 |
147 |
148 |
149 |
150 |
151 |
152 |
153 |
154 |
155 |
156 |
157 |
158 |
159 |
160 |
161 |
162 |
163 |
164 |
165 |
166 |
167 |
168 |
169 |
170 |
171 |
172 |
173 |
174 |
175 |
176 |
177 |
178 |
179 |
180 |
181 |
182 |
183 |
184 |
185 |
186 |
187 |
188 |
189 |
190 |
191 |
192 |
193 |
194 |
195 |
196 |
197 |
198 |
199 |
200 |
201 |
202 |
203 |
204 |
205 |
206 |
207 |
208 |
209 |
210 |
211 |
212 |
213 |
214 |
215 |
216 |
217 |
218 |
219 |
220 |
221 |
222 |
223 |
224 |
225 |
226 |
227 |
228 |
229 |
230 |
231 |
232 |
233 |
234 |
235 |
236 |
237 |
238 |
239 |
240 |
241 |
242 |
243 |
244 |
245 |
246 |
247 |
248 |
249 |
250 |
251 |
252 |
253 |
254 |
255 |
256 |
257 |
258 |
259 |
260 |
261 |
262 |
263 |
264 |
265 |
266 |
267 |
268 |
269 |
270 |
271 |
272 |
273 |
274 |
275 |
276 |
277 |
278 |
279 |
280 |
281 |
282 |
283 |
284 |
285 |
286 |
287 |
288 |
289 |
290 |
291 |
292 |
293 |
294 |
295 |
296 |
297 |
298 |
299 |
300 |
301 |
302 |
303 |
304 |
305 |
306 |
307 |
308 |
309 |
310 |
311 |
312 |
313 |
314 |
315 |
316 |
317 |
318 |
319 |
320 |
321 |
322 |
323 |
324 |
325 |
326 |
327 |
328 |
329 |
330 |
331 |
332 |
333 |
334 |
335 |
336 |
337 |
338 |
339 |
340 |
341 |
342 |
343 |
344 |
345 |
346 |
347 |
348 |
349 |
350 |
351 |
352 |
353 |
354 |
355 |
356 |
357 |
358 |
359 |
360 |
361 |
362 |
363 |
364 |
365 |
366 |
367 |

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | d2j13a1 |
|  | 99.9 | 20 | Fold:7-stranded beta/alpha barrel Superfamily:Glycoside hydrolase/deacetylase Family:NodB-like polysaccharide deacetylase
2 | d2iw0a1 |
|  | 99.9 | 21 | Fold:7-stranded beta/alpha barrel Superfamily:Glycoside hydrolase/deacetylase Family:NodB-like polysaccharide deacetylase
3 | d2cc0a1 |
|  | 99.9 | 22 | Fold:7-stranded beta/alpha barrel Superfamily:Glycoside hydrolase/deacetylase Family:NodB-like polysaccharide deacetylase
4 | c1w17A_ |
|  | 99.9 | 21 | PDB header:hydrolase Chain: A: PDB Molecule:probable polysaccharide deacetylase pdaa; PDBTitle: structure of bacillus subtilis pdaa, a family 42 carbohydrate esterase.
5 | c2iw0A_ |
|  | 99.9 | 21 | PDB header:hydrolase Chain: A: PDB Molecule:chitin deacetylase; PDBTitle: structure of the chitin deacetylase from the fungal2 pathogen colletotrichum lindemuthianum
6 | c2c1iA_ |
|  | 99.9 | 20 | PDB header:hydrolase Chain: A: PDB Molecule:peptidoglycan glcnac deacetylase; PDBTitle: structure of streptococcus pnemoniae peptidoglycan2 deacetylase (sppgda) d 275 n mutant.
7 | d1ny1a_ |
|  | 99.9 | 21 | Fold:7-stranded beta/alpha barrel Superfamily:Glycoside hydrolase/deacetylase Family:NodB-like polysaccharide deacetylase
8 | c2w3zA_ |
|  | 99.9 | 23 | PDB header:hydrolase Chain: A: PDB Molecule:putative deacetylase; PDBTitle: structure of a streptococcus mutans ce4 esterase
9 | c2vyoA_ |
|  | 99.9 | 14 | PDB header:hydrolase Chain: A: PDB Molecule:chitooligosaccharide deacetylase; PDBTitle: chitin deacetylase family member from encephalitozoon2 cuniculi
10 | d2c1ia1 |
|  | 99.8 | 20 | Fold:7-stranded beta/alpha barrel Superfamily:Glycoside hydrolase/deacetylase Family:NodB-like polysaccharide deacetylase
11 | d2c71a1 |
|  | 99.8 | 18 | Fold:7-stranded beta/alpha barrel Superfamily:Glycoside hydrolase/deacetylase Family:NodB-like polysaccharide deacetylase
12 | c3rxzA_ |
|  | 99.7 | 24 | PDB header:hydrolase Chain: A: PDB Molecule:polysaccharide deacetylase; PDBTitle: crystal structure of putative polysaccharide deacetylase from2 mycobacterium smegmatis
13 | c3npfB_ |
|  | 99.6 | 18 | PDB header:hydrolase Chain: B: PDB Molecule:putative dipeptidyl-peptidase vi; PDBTitle: crystal structure of a putative dipeptidyl-peptidase vi (bacova_00612)2 from bacteroides ovatus at 1.72 a resolution
14 | c3qbuD_ |
|  | 99.6 | 20 | PDB header:hydrolase Chain: D: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of putative peptidoglyacn deactelyase (hp0310) from2 helicobacter pylori
15 | c1xovA_ |
|  | 99.6 | 10 | PDB header:hydrolase Chain: A: PDB Molecule:ply protein; PDBTitle: the crystal structure of the listeria monocytogenes bacteriophage psa2 endolysin plypsa
16 | d1z7aa1 |
|  | 99.5 | 14 | Fold:7-stranded beta/alpha barrel Superfamily:Glycoside hydrolase/deacetylase Family:PA1517-like
17 | c3s6oD_ |
|  | 99.5 | 13 | PDB header:hydrolase Chain: D: PDB Molecule:polysaccharide deacetylase family protein; PDBTitle: crystal structure of a polysaccharide deacetylase family protein from2 burkholderia pseudomallei
18 | d2nlya1 |
|  | 99.4 | 10 | Fold:7-stranded beta/alpha barrel Superfamily:Glycoside hydrolase/deacetylase Family:Divergent polysaccharide deacetylase
19 | c2krsA_ |
|  | 99.2 | 12 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:probable enterotoxin; PDBTitle: solution nmr structure of sh3 domain from cpf_0587 (fragment2 415-479) from clostridium perfringens. northeast structural3 genomics consortium (nesg) target cpr74a.
20 | c2kt8A_ |
|  | 99.2 | 8 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:probable surface protein; PDBTitle: solution nmr structure of the cpe1231(468-535) protein from2 clostridium perfringens, northeast structural genomics3 consortium target cpr82b
21 | c3h41A_ |
| not modelled | 99.1 | 18 | PDB header:hydrolase Chain: A: PDB Molecule:nlp/p60 family protein; PDBTitle: crystal structure of a nlpc/p60 family protein (bce_2878) from2 bacillus cereus atcc 10987 at 1.79 a resolution
22 | c2kq8A_ |
| not modelled | 99.1 | 13 | PDB header:hydrolase Chain: A: PDB Molecule:cell wall hydrolase; PDBTitle: solution nmr structure of a domain from bt9727_4915 from2 bacillus thuringiensis, northeast structural genomics3 consortium target bur95a
23 | c2kybA_ |
| not modelled | 99.0 | 17 | PDB header:toxin Chain: A: PDB Molecule:mannosyl-glycoprotein endo-beta-n-acetylglucosamidase PDBTitle: solution structure of cpr82g from clostridium perfringens. north east2 structural genomics consortium target cpr82g
24 | c1ng2A_ |
| not modelled | 99.0 | 18 | PDB header:oxidoreductase activator Chain: A: PDB Molecule:neutrophil cytosolic factor 1; PDBTitle: structure of autoinhibited p47phox
25 | c1m9sA_ |
| not modelled | 98.8 | 21 | PDB header:signaling protein Chain: A: PDB Molecule:internalin b; PDBTitle: crystal structure of internalin b (inlb), a listeria2 monocytogenes virulence protein containing sh3-like3 domains.
26 | c1ov3A_ |
| not modelled | 98.7 | 18 | PDB header:oxidoreductase activator Chain: A: PDB Molecule:neutrophil cytosol factor 1; PDBTitle: structure of the p22phox-p47phox complex
27 | c1griA_ |
| not modelled | 98.4 | 18 | PDB header:signal transduction adaptor Chain: A: PDB Molecule:growth factor bound protein 2; PDBTitle: grb2
28 | c2eyzA_ |
| not modelled | 98.1 | 11 | PDB header:signaling protein Chain: A: PDB Molecule:v-crk sarcoma virus ct10 oncogene homolog PDBTitle: ct10-regulated kinase isoform ii
29 | d1k1xa3 |
| not modelled | 98.0 | 13 | Fold:7-stranded beta/alpha barrel Superfamily:Glycoside hydrolase/deacetylase Family:4-alpha-glucanotransferase, N-terminal domain
30 | c2l3sA_ |
| not modelled | 97.7 | 13 | PDB header:structural protein Chain: A: PDB Molecule:autoinhibited crk protein; PDBTitle: structure of the autoinhibited crk
31 | c3m1uB_ |
|  | 97.7 | 17 | PDB header:hydrolase Chain: B: PDB Molecule:putative gamma-d-glutamyl-l-diamino acid endopeptidase; PDBTitle: crystal structure of a putative gamma-d-glutamyl-l-diamino acid2 endopeptidase (dvu_0896) from desulfovibrio vulgaris hildenborough at3 1.75 a resolution
32 | c1k1yA_ |
| not modelled | 97.4 | 13 | PDB header:transferase Chain: A: PDB Molecule:4-alpha-glucanotransferase; PDBTitle: crystal structure of thermococcus litoralis 4-alpha-glucanotransferase2 complexed with acarbose
33 | d2b5dx2 |
| not modelled | 96.5 | 5 | Fold:7-stranded beta/alpha barrel Superfamily:Glycoside hydrolase/deacetylase Family:AmyC N-terminal domain-like
34 | c2ed0A_ |
| not modelled | 96.4 | 20 | PDB header:signaling protein Chain: A: PDB Molecule:abl interactor 2; PDBTitle: solution structure of the sh3 domain of abl interactor 22 (abelson interactor 2)
35 | c2pqhA_ |
| not modelled | 96.3 | 11 | PDB header:structural protein Chain: A: PDB Molecule:spectrin alpha chain, brain; PDBTitle: structure of sh3 chimera with a type ii ligand linked to the chain c-2 terminal
36 | c2yuoA_ |
| not modelled | 96.2 | 13 | PDB header:signaling protein Chain: A: PDB Molecule:run and tbc1 domain containing 3; PDBTitle: solution structure of the sh3 domain of mouse run and tbc12 domain containing 3
37 | c2dbmA_ |
| not modelled | 96.1 | 16 | PDB header:transferase, signaling protein Chain: A: PDB Molecule:sh3-containing grb2-like protein 2; PDBTitle: solution structures of the sh3 domain of human sh3-2 containing grb2-like protein 2
38 | c2eyyA_ |
| not modelled | 96.1 | 14 | PDB header:signaling protein Chain: A: PDB Molecule:v-crk sarcoma virus ct10 oncogene homolog PDBTitle: ct10-regulated kinase isoform i
39 | c2ekhA_ |
| not modelled | 96.1 | 17 | PDB header:signaling protein Chain: A: PDB Molecule:sh3 and px domain-containing protein 2a; PDBTitle: solution structures of the sh3 domain of human kiaa0418
40 | c2dmoA_ |
| not modelled | 96.0 | 20 | PDB header:signaling protein Chain: A: PDB Molecule:neutrophil cytosol factor 2; PDBTitle: refined solution structure of the 1st sh3 domain from human2 neutrophil cytosol factor 2 (ncf-2)
41 | c2nwmA_ |
| not modelled | 96.0 | 8 | PDB header:cell adhesion Chain: A: PDB Molecule:vinexin; PDBTitle: solution structure of the first sh3 domain of human vinexin2 and its interaction with the peptides from vinculin
42 | c2b5dX_ |
| not modelled | 95.9 | 6 | PDB header:hydrolase Chain: X: PDB Molecule:alpha-amylase; PDBTitle: crystal structure of the novel alpha-amylase amyc from thermotoga2 maritima
43 | d1tuca_ |
| not modelled | 95.9 | 11 | Fold:SH3-like barrel Superfamily:SH3-domain Family:SH3-domain
44 | d1utia_ |
| not modelled | 95.9 | 14 | Fold:SH3-like barrel Superfamily:SH3-domain Family:SH3-domain
45 | d1sema_ |
| not modelled | 95.8 | 10 | Fold:SH3-like barrel Superfamily:SH3-domain Family:SH3-domain
46 | c2djqA_ |
| not modelled | 95.7 | 14 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:sh3 domain containing ring finger 2; PDBTitle: the solution structure of the first sh3 domain of mouse sh32 domain containing ring finger 2
47 | d1gria2 |
| not modelled | 95.7 | 17 | Fold:SH3-like barrel Superfamily:SH3-domain Family:SH3-domain
48 | d1ng2a2 |
| not modelled | 95.7 | 7 | Fold:SH3-like barrel Superfamily:SH3-domain Family:SH3-domain
49 | d1oeba_ |
| not modelled | 95.7 | 16 | Fold:SH3-like barrel Superfamily:SH3-domain Family:SH3-domain
50 | d1ug1a_ |
| not modelled | 95.7 | 19 | Fold:SH3-like barrel Superfamily:SH3-domain Family:SH3-domain
51 | d1wfwa_ |
| not modelled | 95.6 | 13 | Fold:SH3-like barrel Superfamily:SH3-domain Family:SH3-domain
52 | c2df6A_ |
| not modelled | 95.6 | 10 | PDB header:signaling protein Chain: A: PDB Molecule:rho guanine nucleotide exchange factor 7; PDBTitle: crystal structure of the sh3 domain of betapix in complex2 with a high affinity peptide from pak2
53 | c2dbkA_ |
| not modelled | 95.6 | 16 | PDB header:signaling protein Chain: A: PDB Molecule:crk-like protein; PDBTitle: solution structures of the sh3 domain of human crk-like2 protein
54 | d1ov3a2 |
| not modelled | 95.6 | 30 | Fold:SH3-like barrel Superfamily:SH3-domain Family:SH3-domain
55 | c1x2pA_ |
| not modelled | 95.6 | 15 | PDB header:transferase Chain: A: PDB Molecule:protein arginine n-methyltransferase 2; PDBTitle: solution structure of the sh3 domain of the protein2 arginine n-methyltransferase 2
56 | c2kbtA_ |
| not modelled | 95.6 | 12 | PDB header:signaling protein Chain: A: PDB Molecule:chimera of proto-oncogene vav, linker, PDBTitle: attachment of an nmr-invisible solubility enhancement tag2 (inset) using a sortase-mediated protein ligation method
57 | c1r77A_ |
| not modelled | 95.6 | 16 | PDB header:hydrolase Chain: A: PDB Molecule:cell wall targeting domain of glycylglycine PDBTitle: crystal structure of the cell wall targeting domain of2 peptidylglycan hydrolase ale-1
58 | c1wyxA_ |
| not modelled | 95.6 | 16 | PDB header:cell adhesion Chain: A: PDB Molecule:crk-associated substrate; PDBTitle: the crystal structure of the p130cas sh3 domain at 1.1 a2 resolution
59 | c2dl3A_ |
| not modelled | 95.5 | 13 | PDB header:cell adhesion, signaling protein Chain: A: PDB Molecule:sorbin and sh3 domain-containing protein 1; PDBTitle: solution structure of the first sh3 domain of human sorbin2 and sh3 domain-containing protein 1
60 | c2drmB_ |
| not modelled | 95.5 | 12 | PDB header:contractile protein Chain: B: PDB Molecule:acanthamoeba myosin ib; PDBTitle: acanthamoeba myosin i sh3 domain bound to acan125
61 | d1udla_ |
| not modelled | 95.4 | 12 | Fold:SH3-like barrel Superfamily:SH3-domain Family:SH3-domain
62 | d1uhfa_ |
| not modelled | 95.3 | 14 | Fold:SH3-like barrel Superfamily:SH3-domain Family:SH3-domain
63 | d1uj0a_ |
| not modelled | 95.3 | 11 | Fold:SH3-like barrel Superfamily:SH3-domain Family:SH3-domain
64 | c2j6kE_ |
| not modelled | 95.3 | 11 | PDB header:protein binding Chain: E: PDB Molecule:cd2-associated protein; PDBTitle: n-terminal sh3 domain of cms (cd2ap human homolog)
65 | c2csqA_ |
| not modelled | 95.3 | 10 | PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:rim binding protein 2; PDBTitle: solution structure of the second sh3 domain of human rim-2 binding protein 2
66 | d1nega_ |
| not modelled | 95.3 | 9 | Fold:SH3-like barrel Superfamily:SH3-domain Family:SH3-domain
67 | c1negA_ |
| not modelled | 95.3 | 9 | PDB header:structural protein Chain: A: PDB Molecule:spectrin alpha chain, brain; PDBTitle: crystal structure analysis of n-and c-terminal labeled sh3-2 domain of alpha-chicken spectrin
68 | d1oota_ |
| not modelled | 95.3 | 15 | Fold:SH3-like barrel Superfamily:SH3-domain Family:SH3-domain
69 | d1uuea_ |
| not modelled | 95.2 | 14 | Fold:SH3-like barrel Superfamily:SH3-domain Family:SH3-domain
70 | c2dilA_ |
| not modelled | 95.2 | 21 | PDB header:cell adhesion Chain: A: PDB Molecule:proline-serine-threonine phosphatase-interacting PDBTitle: solution structure of the sh3 domain of the human proline-2 serine-threonine phosphatase-interacting protein 1
71 | d1gcqa_ |
| not modelled | 95.2 | 18 | Fold:SH3-like barrel Superfamily:SH3-domain Family:SH3-domain
72 | d1pwta_ |
| not modelled | 95.2 | 12 | Fold:SH3-like barrel Superfamily:SH3-domain Family:SH3-domain
73 | c2yunA_ |
| not modelled | 95.2 | 11 | PDB header:protein transport Chain: A: PDB Molecule:nostrin; PDBTitle: solution structure of the sh3 domain of human nostrin
74 | c1zx6A_ |
| not modelled | 95.2 | 24 | PDB header:protein binding Chain: A: PDB Molecule:ypr154wp; PDBTitle: high-resolution crystal structure of yeast pin3 sh3 domain
75 | d1uffa_ |
| not modelled | 95.1 | 12 | Fold:SH3-like barrel Superfamily:SH3-domain Family:SH3-domain
76 | d1u06a1 |
| not modelled | 95.1 | 12 | Fold:SH3-like barrel Superfamily:SH3-domain Family:SH3-domain
77 | c2dl4A_ |
| not modelled | 95.0 | 17 | PDB header:signaling protein Chain: A: PDB Molecule:protein stac; PDBTitle: solution structure of the first sh3 domain of stac protein
78 | d1gl5a_ |
| not modelled | 95.0 | 9 | Fold:SH3-like barrel Superfamily:SH3-domain Family:SH3-domain
79 | c2d1xD_ |
| not modelled | 95.0 | 11 | PDB header:cell invasion Chain: D: PDB Molecule:cortactin isoform a; PDBTitle: the crystal structure of the cortactin-sh3 domain and amap1-2 peptide complex
80 | c1w70A_ |
| not modelled | 95.0 | 5 | PDB header:sh3 domain Chain: A: PDB Molecule:neutrophil cytosol factor 4; PDBTitle: sh3 domain of p40phox complexed with c-terminal polyproline2 region of p47phox
81 | c2dnuA_ |
| not modelled | 95.0 | 9 | PDB header:structural genomics, structural protein Chain: A: PDB Molecule:sh3 multiple domains 1; PDBTitle: solution structure of rsgi ruh-061, a sh3 domain from human
82 | c2krnA_ |
| not modelled | 94.9 | 8 | PDB header:signaling protein Chain: A: PDB Molecule:cd2-associated protein; PDBTitle: high resolution structure of the second sh3 domain of cd2ap
83 | c1zlmA_ |
| not modelled | 94.9 | 11 | PDB header:signaling protein Chain: A: PDB Molecule:osteoclast stimulating factor 1; PDBTitle: crystal structure of the sh3 domain of human osteoclast2 stimulating factor
84 | c1wi7A_ |
| not modelled | 94.9 | 11 | PDB header:protein binding Chain: A: PDB Molecule:sh3-domain kinase binding protein 1; PDBTitle: solution structure of the sh3 domain of sh3-domain kinase2 binding protein 1
85 | d1gbra_ |
| not modelled | 94.8 | 17 | Fold:SH3-like barrel Superfamily:SH3-domain Family:SH3-domain
86 | d1k4us_ |
| not modelled | 94.8 | 15 | Fold:SH3-like barrel Superfamily:SH3-domain Family:SH3-domain
87 | c2k6dA_ |
| not modelled | 94.8 | 8 | PDB header:sh3 domain/ubiquitin Chain: A: PDB Molecule:sh3 domain-containing kinase-binding protein 1; PDBTitle: cin85 sh3-c domain in complex with ubiquitin
88 | c1x2qA_ |
| not modelled | 94.8 | 13 | PDB header:signaling protein Chain: A: PDB Molecule:signal transducing adapter molecule 2; PDBTitle: solution structure of the sh3 domain of the signal2 transducing adaptor molecule 2
89 | c2epdA_ |
| not modelled | 94.8 | 19 | PDB header:protein binding Chain: A: PDB Molecule:rho gtpase-activating protein 4; PDBTitle: solution structure of sh3 domain in rho-gtpase-activating2 protein 4
90 | c2xmfA_ |
| not modelled | 94.8 | 11 | PDB header:motor protein Chain: A: PDB Molecule:myosin 1e sh3; PDBTitle: myosin 1e sh3
91 | d1wlpb2 |
| not modelled | 94.8 | 16 | Fold:SH3-like barrel Superfamily:SH3-domain Family:SH3-domain
92 | c2ebpA_ |
| not modelled | 94.8 | 9 | PDB header:cell adhesion Chain: A: PDB Molecule:sam and sh3 domain-containing protein 1; PDBTitle: solution structure of the sh3 domain from human sam and sh32 domain containing protein 1
93 | c2jxbA_ |
| not modelled | 94.7 | 13 | PDB header:signaling protein complex Chain: A: PDB Molecule:t-cell surface glycoprotein cd3 epsilon chain, PDBTitle: structure of cd3epsilon-nck2 first sh3 domain complex
94 | c2dl8A_ |
| not modelled | 94.7 | 7 | PDB header:signaling protein Chain: A: PDB Molecule:slit-robo rho gtpase-activating protein 2; PDBTitle: solution structure of the sh3 domain of human slit-robo rho2 gtpase-activating protein 2
95 | c2fg0B_ |
| not modelled | 94.7 | 11 | PDB header:hydrolase Chain: B: PDB Molecule:cog0791: cell wall-associated hydrolases (invasion- PDBTitle: crystal structure of a putative gamma-d-glutamyl-l-diamino acid2 endopeptidase (npun_r0659) from nostoc punctiforme pcc 73102 at 1.793 a resolution
96 | c2azsA_ |
| not modelled | 94.7 | 18 | PDB header:signaling protein Chain: A: PDB Molecule:sh2-sh3 adapter protein drk; PDBTitle: nmr structure of the n-terminal sh3 domain of drk2 (calculated without noe restraints)
97 | c2ysqA_ |
| not modelled | 94.6 | 12 | PDB header:signaling protein Chain: A: PDB Molecule:rho guanine nucleotide exchange factor 9; PDBTitle: solution structure of the sh3 domain from rho guanine2 nucleotide exchange factor 9
98 | c2dx1A_ |
| not modelled | 94.6 | 16 | PDB header:signaling protein Chain: A: PDB Molecule:rho guanine nucleotide exchange factor 4; PDBTitle: crystal structure of rhogef protein asef
99 | c2a28D_ |
| not modelled | 94.6 | 3 | PDB header:signaling protein Chain: D: PDB Molecule:bzz1 protein; PDBTitle: atomic-resolution crystal structure of the second sh32 domain of yeast bzz1 determined from a pseudomerohedrally3 twinned crystal
100 | c2dlpA_ |
| not modelled | 94.6 | 16 | PDB header:structural protein Chain: A: PDB Molecule:kiaa1783 protein; PDBTitle: solution structure of the sh3 domain of human kiaa17832 protein
101 | c1z9qA_ |
| not modelled | 94.5 | 13 | PDB header:oxidoreductase activator Chain: A: PDB Molecule:neutrophil cytosol factor 4; PDBTitle: solution structure of sh3 domain of p40phox
102 | d1opka1 |
| not modelled | 94.5 | 11 | Fold:SH3-like barrel Superfamily:SH3-domain Family:SH3-domain
103 | c2eyxA_ |
| not modelled | 94.5 | 10 | PDB header:signaling protein Chain: A: PDB Molecule:v-crk sarcoma virus ct10 oncogene homolog PDBTitle: c-terminal sh3 domain of ct10-regulated kinase
104 | c2cubA_ |
| not modelled | 94.5 | 6 | PDB header:signaling protein Chain: A: PDB Molecule:cytoplasmic protein nck1; PDBTitle: solution structure of the sh3 domain of the human2 cytoplasmic protein nck1
105 | c1x69A_ |
| not modelled | 94.4 | 12 | PDB header:signaling protein Chain: A: PDB Molecule:cortactin isoform a; PDBTitle: solution structures of the sh3 domain of human src2 substrate cortactin
106 | d1ujya_ |
| not modelled | 94.4 | 13 | Fold:SH3-like barrel Superfamily:SH3-domain Family:SH3-domain
107 | d1e6ga_ |
| not modelled | 94.3 | 16 | Fold:SH3-like barrel Superfamily:SH3-domain Family:SH3-domain
108 | c2ed1A_ |
| not modelled | 94.3 | 12 | PDB header:signaling protein Chain: A: PDB Molecule:130 kda phosphatidylinositol 4,5-biphosphate- PDBTitle: solution structure of the sh3 domain of 130 kda2 phosphatidylinositol 4,5-biphosphate-dependent arf1 gtpase-3 activating protein
109 | c2egaA_ |
| not modelled | 94.3 | 14 | PDB header:signaling protein Chain: A: PDB Molecule:sh3 and px domain-containing protein 2a; PDBTitle: solution structure of the first sh3 domain from human2 kiaa0418 protein
110 | c2dybA_ |
| not modelled | 94.3 | 16 | PDB header:oxidoreductase Chain: A: PDB Molecule:neutrophil cytosol factor 4; PDBTitle: the crystal structure of human p40(phox)
111 | d1e6ha_ |
| not modelled | 94.3 | 16 | Fold:SH3-like barrel Superfamily:SH3-domain Family:SH3-domain
112 | c2csiA_ |
| not modelled | 94.2 | 26 | PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:rim binding protein 2; PDBTitle: solution structure of the third sh3 domain of human rim-2 binding protein 2
113 | d1ov3a1 |
| not modelled | 94.2 | 16 | Fold:SH3-like barrel Superfamily:SH3-domain Family:SH3-domain
114 | c2bz8B_ |
| not modelled | 94.2 | 13 | PDB header:sh3 domain Chain: B: PDB Molecule:sh3-domain kinase binding protein 1; PDBTitle: n-terminal sh3 domain of cin85 bound to cbl-b peptide
115 | c2js0A_ |
| not modelled | 94.2 | 10 | PDB header:signaling protein Chain: A: PDB Molecule:cytoplasmic protein nck1; PDBTitle: solution structure of second sh3 domain of adaptor nck
116 | d2fo0a1 |
| not modelled | 94.1 | 11 | Fold:SH3-like barrel Superfamily:SH3-domain Family:SH3-domain
117 | d1j3ta_ |
| not modelled | 93.9 | 17 | Fold:SH3-like barrel Superfamily:SH3-domain Family:SH3-domain
118 | c1x43A_ |
| not modelled | 93.9 | 14 | PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:sh3 domain grb2-like protein b1; PDBTitle: solution structure of the sh3 domain of endophilin b12 (sh3g1b1)
119 | c2l0aA_ |
| not modelled | 93.9 | 8 | PDB header:signaling protein Chain: A: PDB Molecule:signal transducing adapter molecule 1; PDBTitle: solution nmr structure of signal transducing adapter molecule 1 stam-12 from homo sapiens, northeast structural genomics consortium target3 hr4479e
120 | d1lcka1 |
| not modelled | 93.9 | 11 | Fold:SH3-like barrel Superfamily:SH3-domain Family:SH3-domain

Binding site prediction |

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Transmembrane helix prediction |

Transmembrane helices have been predicted in your sequence to adopt the topology shown below

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group
Imperial College London
Lawrence Kelley, Benjamin Jefferys
Disclaimer
Terms and Conditions
Component software
Template detection: HHpred 1.51
Secondary structure prediction: Psi-pred 2.5
Disorder prediction: Disopred 2.4
Transmembrane prediction: Memsat_SVM
Multi-template modelling and ab initio: Poing 1.0