Phyre 2 alignment of P31666 with c1zuyB_

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Job Description | P31666
Confidence | 91.16% | Date | Thu Jan 5 11:48:29 GMT 2012
Rank | 178 | Aligned Residues | 50
% Identity | 14% | Template | c1zuyB_
PDB info | PDB header:contractile protein | Chain: B: PDB Molecule:myosin-5 isoform; | PDBTitle: high-resolution structure of yeast myo5 sh3 domain
Resolution | 1.39 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 33 | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . |  | 60 | . | . | . | . | . | . | . | . |  |  | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | A | V | W | A | Q | I | G | D | K | M | V | T | V | G | N | I | R | A | G | Q | I | I | A | V | E | P | T | . | A | A | S | Y | Y | A | F | N | F | . | . | G | F | G | K | G | F | I | D | K | G | H | L | E | P
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | A | A | Y | D | F | P | G | S | G | S | P | S | E | L | P | L | K | K | G | D | V | I | Y | I | T | R | E | E | P | S | G | W | S | L | G | K | L | L | D | G | S | K | E | G | W | V | P | T | A | Y | M | K | P
Template Known Secondary structure |  |  | S | S |  | B |  |  |  | S |  | T | T | B |  |  | B |  | T | T |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  |  | T | T | S |  |  |  |  |  |  |  | G | G | G |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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