Phyre 2 alignment of P31666 with c1t0jA_

Return to main results | Retrieve Phyre Job Id

Job Description | P31666
Confidence | 72.40% | Date | Thu Jan 5 11:48:29 GMT 2012
Rank | 236 | Aligned Residues | 30
% Identity | 20% | Template | c1t0jA_
PDB info | PDB header:signaling protein | Chain: A: PDB Molecule:voltage-gated calcium channel subunit beta2a; | PDBTitle: crystal structure of a complex between voltage-gated calcium channel2 beta2a subunit and a peptide of the alpha1c subunit
Resolution | 2.00 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 126 | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . |  |  |  | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |
Query Sequence |  | V | L | A | D | N | L | R | Y | P | I | L | H | K | L | K | D | R | L | N | Q | T | W | Y | Q | I | R | I | . | . | . | G | D | R | L | A | Y | I
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | S | F | E | A | K | D | F | L | H | V | K | E | K | F | N | N | . | . | . | . | D | W | W | I | G | R | L | V | K | E | G | C | E | I | G | F | I
Template Known Secondary structure |  |  | B |  | T | T |  |  |  |  |  |  |  |  |  |  | T | . | . | . | . | T |  |  |  |  |  |  | S | S | T | T |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 86 | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . |  |  |  |  | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions