BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (176 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P37025 2'-5'-RNA ligase n=156 Tax=Enterobacteriaceae Re... 360 2e-98 UniRef50_Q02P23 2'-5' RNA ligase n=7 Tax=Pseudomonas RepID=Q02P2... 96 6e-19 UniRef50_Q15YM1 2'-5' RNA ligase n=1 Tax=Pseudoalteromonas atlan... 91 2e-17 UniRef50_B8GQV2 2'-5' RNA ligase n=1 Tax=Thioalkalivibrio sp. HL... 91 2e-17 UniRef50_C4L922 2'-5' RNA ligase n=1 Tax=Tolumonas auensis DSM 9... 90 3e-17 UniRef50_C4ZJW1 2'-5' RNA ligase n=1 Tax=Thauera sp. MZ1T RepID=... 90 3e-17 UniRef50_Q60BS9 Putative 2'-5' RNA ligase n=1 Tax=Methylococcus ... 89 6e-17 UniRef50_Q3JCL1 2',5' RNA ligase n=2 Tax=Nitrosococcus oceani Re... 88 1e-16 UniRef50_A1AS05 2'-5' RNA ligase n=1 Tax=Pelobacter propionicus ... 86 6e-16 UniRef50_A0KP01 2'-5' RNA ligase n=2 Tax=Aeromonas RepID=A0KP01_... 86 6e-16 UniRef50_Q1IPR0 2',5' RNA ligase n=1 Tax=Candidatus Koribacter v... 84 1e-15 UniRef50_A4XVF3 2'-5' RNA ligase n=1 Tax=Pseudomonas mendocina y... 84 2e-15 UniRef50_Q2Z065 Putative 2'-5' RNA ligase n=1 Tax=uncultured gam... 83 3e-15 UniRef50_Q2Y753 2',5' RNA ligase n=1 Tax=Nitrosospira multiformi... 83 4e-15 UniRef50_C1DGI0 2-5 RNA ligase protein n=1 Tax=Azotobacter vinel... 82 8e-15 UniRef50_A3QHP4 2'-5' RNA ligase n=1 Tax=Shewanella loihica PV-4... 80 2e-14 UniRef50_C6MFU4 2'-5' RNA ligase n=1 Tax=Nitrosomonas sp. AL212 ... 80 3e-14 UniRef50_Q5NYK1 2'-5' RNA ligase n=1 Tax=Aromatoleum aromaticum ... 77 4e-13 UniRef50_C7R810 2'-5' RNA ligase n=1 Tax=Kangiella koreensis DSM... 75 1e-12 UniRef50_C0N774 2'-5' RNA ligase n=1 Tax=Methylophaga thiooxidan... 74 2e-12 UniRef50_A1WW74 2'-5' RNA ligase n=1 Tax=Halorhodospira halophil... 74 2e-12 UniRef50_Q0AGI2 2'-5' RNA ligase n=2 Tax=Nitrosomonas RepID=Q0AG... 73 5e-12 UniRef50_A1S9X0 Putative 2'-5' RNA ligase n=1 Tax=Shewanella ama... 72 6e-12 UniRef50_Q3AEX2 Putative 2'-5' RNA ligase n=1 Tax=Carboxydotherm... 72 8e-12 UniRef50_B9Z7M0 2'-5' RNA ligase n=1 Tax=Lutiella nitroferrum 20... 72 1e-11 UniRef50_C5V3P4 2'-5' RNA ligase n=1 Tax=Gallionella ferruginea ... 71 1e-11 UniRef50_Q3SK36 2',5' RNA ligase n=1 Tax=Thiobacillus denitrific... 71 2e-11 UniRef50_Q7P1N0 2'-5' RNA ligase n=1 Tax=Chromobacterium violace... 70 3e-11 UniRef50_B8CTB7 2'-5' RNA ligase, putative n=1 Tax=Shewanella pi... 70 4e-11 UniRef50_Q47EL0 2',5' RNA ligase n=1 Tax=Dechloromonas aromatica... 69 9e-11 UniRef50_B4S0B5 2,5 RNA ligase n=2 Tax=Alteromonas macleodii Rep... 68 1e-10 UniRef50_A3K2S8 2',5' RNA ligase n=1 Tax=Sagittula stellata E-37... 68 1e-10 UniRef50_B9ZLA9 2'-5' RNA ligase n=1 Tax=Thioalkalivibrio sp. K9... 67 2e-10 UniRef50_A4BU36 2'-5' RNA ligase, putative n=1 Tax=Nitrococcus m... 67 2e-10 UniRef50_C7IIN7 2'-5' RNA ligase n=1 Tax=Clostridium papyrosolve... 67 2e-10 UniRef50_B3EA65 2'-5' RNA ligase n=1 Tax=Geobacter lovleyi SZ Re... 67 4e-10 UniRef50_Q88K67 2'-5' RNA ligase, putative n=6 Tax=Pseudomonas R... 66 4e-10 UniRef50_C9R942 2'-5' RNA ligase n=1 Tax=Ammonifex degensii KC4 ... 66 5e-10 UniRef50_A9B5P6 2'-5' RNA ligase n=1 Tax=Herpetosiphon aurantiac... 66 6e-10 UniRef50_B3T3P3 Putative 2',5' RNA ligase family protein n=2 Tax... 66 6e-10 UniRef50_A1SVM8 2'-5' RNA ligase n=1 Tax=Psychromonas ingrahamii... 65 7e-10 UniRef50_UPI000196B731 hypothetical protein CATMIT_00742 n=1 Tax... 65 8e-10 UniRef50_B8I3E4 2'-5' RNA ligase n=1 Tax=Clostridium cellulolyti... 65 8e-10 UniRef50_C6P1X6 2'-5' RNA ligase n=1 Tax=Sideroxydans lithotroph... 65 9e-10 UniRef50_Q58963 UPF0097 protein MJ1568 n=11 Tax=Methanococcales ... 65 1e-09 UniRef50_Q1QSH4 2',5' RNA ligase n=1 Tax=Chromohalobacter salexi... 65 1e-09 UniRef50_A7GH44 2'-5' RNA ligase n=10 Tax=Clostridium RepID=A7GH... 64 2e-09 UniRef50_Q39PT9 2',5' RNA ligase n=4 Tax=Geobacter RepID=Q39PT9_... 64 2e-09 UniRef50_B5E8F5 2'-5' RNA ligase n=3 Tax=Geobacter RepID=B5E8F5_... 64 2e-09 UniRef50_Q9X2H4 UPF0097 protein TM_1860 n=9 Tax=Thermotogaceae R... 64 2e-09 UniRef50_Q0BV79 2'-5' RNA ligase n=2 Tax=Acetobacteraceae RepID=... 64 3e-09 UniRef50_D0CTG2 2'-5' RNA ligase n=1 Tax=Silicibacter lacuscaeru... 63 3e-09 UniRef50_A3VLU9 2'-5' RNA ligase n=1 Tax=Rhodobacterales bacteri... 63 5e-09 UniRef50_Q5SHB1 2'-5' RNA ligase n=7 Tax=Thermaceae RepID=Q5SHB1... 62 8e-09 UniRef50_B5JNL9 2'-5' RNA ligase n=1 Tax=Verrucomicrobiae bacter... 62 1e-08 UniRef50_B0TTJ1 2'-5' RNA ligase n=2 Tax=Shewanella RepID=B0TTJ1... 62 1e-08 UniRef50_B5YF63 2'-5' RNA ligase n=2 Tax=Dictyoglomus RepID=B5YF... 62 1e-08 UniRef50_Q1Z4G8 Putative uncharacterized protein n=2 Tax=Photoba... 62 1e-08 UniRef50_Q0Q0I5 LigT n=1 Tax=Heliophilum fasciatum RepID=Q0Q0I5_... 61 1e-08 UniRef50_A9A3X7 2'-5' RNA ligase n=1 Tax=Nitrosopumilus maritimu... 61 1e-08 UniRef50_Q0ABC1 2'-5' RNA ligase n=1 Tax=Alkalilimnicola ehrlich... 61 1e-08 UniRef50_C8WVE5 2'-5' RNA ligase n=2 Tax=Alicyclobacillus acidoc... 61 2e-08 UniRef50_A6FTX1 2'-5' RNA ligase n=1 Tax=Roseobacter sp. AzwK-3b... 61 2e-08 UniRef50_D1CCP6 2'-5' RNA ligase n=1 Tax=Thermobaculum terrenum ... 60 2e-08 UniRef50_C9PFM9 Putative uncharacterized protein n=1 Tax=Vibrio ... 60 2e-08 UniRef50_A1HSF5 2'-5' RNA ligase n=1 Tax=Thermosinus carboxydivo... 60 3e-08 UniRef50_B9L2B1 2'-5' RNA ligase n=1 Tax=Thermomicrobium roseum ... 60 4e-08 UniRef50_B6IVY2 2'-5' RNA ligase, putative n=1 Tax=Rhodospirillu... 59 5e-08 UniRef50_A7GTX3 2'-5' RNA ligase n=73 Tax=Bacillus cereus group ... 59 6e-08 UniRef50_C8SB57 2'-5' RNA ligase n=1 Tax=Ferroglobus placidus DS... 59 6e-08 UniRef50_B4D614 2'-5' RNA ligase n=1 Tax=Chthoniobacter flavus E... 59 7e-08 UniRef50_C3X1K9 2'-5' RNA ligase n=1 Tax=Oxalobacter formigenes ... 59 7e-08 UniRef50_Q1IWF3 2',5' RNA ligase n=2 Tax=Deinococcus RepID=Q1IWF... 59 9e-08 UniRef50_UPI00016981C7 2'''',5'''' RNA ligase n=1 Tax=Endoriftia... 59 1e-07 UniRef50_A6EV98 2',5' RNA ligase n=1 Tax=Marinobacter algicola D... 58 1e-07 UniRef50_Q2CG27 2'-5' RNA ligase (Fragment) n=1 Tax=Oceanicola g... 58 1e-07 UniRef50_A4XK57 2'-5' RNA ligase n=2 Tax=Clostridia RepID=A4XK57... 58 1e-07 UniRef50_A8MDT9 2'-5' RNA ligase n=1 Tax=Caldivirga maquilingens... 58 1e-07 UniRef50_Q47TD6 2',5' RNA ligase n=1 Tax=Thermobifida fusca YX R... 58 1e-07 UniRef50_Q72W43 2'-5' RNA ligase n=2 Tax=Leptospira interrogans ... 58 2e-07 UniRef50_A1U2M3 2'-5' RNA ligase n=1 Tax=Marinobacter aquaeolei ... 58 2e-07 UniRef50_C7HZ61 2'-5' RNA ligase n=1 Tax=Thiomonas intermedia K1... 58 2e-07 UniRef50_A3DNW5 2'-5' RNA ligase n=1 Tax=Staphylothermus marinus... 57 2e-07 UniRef50_Q2VZ42 2'-5' RNA ligase n=2 Tax=Magnetospirillum RepID=... 57 2e-07 UniRef50_C6QFN4 2'-5' RNA ligase n=1 Tax=Hyphomicrobium denitrif... 57 3e-07 UniRef50_A9IDL0 Putative 2'-5' RNA ligase n=3 Tax=Bordetella Rep... 57 3e-07 UniRef50_A1RS17 2'-5' RNA ligase n=5 Tax=Thermoproteaceae RepID=... 57 3e-07 UniRef50_A0LLA5 2'-5' RNA ligase n=1 Tax=Syntrophobacter fumarox... 57 4e-07 UniRef50_A3DCR1 2'-5' RNA ligase n=3 Tax=Clostridium thermocellu... 56 5e-07 UniRef50_O28125 UPF0097 protein AF_2157 n=1 Tax=Archaeoglobus fu... 56 5e-07 UniRef50_A9WCY3 2'-5' RNA ligase n=3 Tax=Chloroflexus RepID=A9WC... 56 5e-07 UniRef50_A5D3U3 2'-5' RNA ligase n=1 Tax=Pelotomaculum thermopro... 56 5e-07 UniRef50_C8WMV6 2'-5' RNA ligase n=2 Tax=Coriobacteriaceae RepID... 56 5e-07 UniRef50_B8D3G7 2'-5' RNA ligase n=1 Tax=Desulfurococcus kamchat... 56 5e-07 UniRef50_C6PE45 2'-5' RNA ligase n=1 Tax=Thermoanaerobacterium t... 56 6e-07 UniRef50_Q6L1E4 2'-5' RNA ligase n=1 Tax=Picrophilus torridus Re... 55 7e-07 UniRef50_C3XAD7 2',5' RNA ligase n=1 Tax=Oxalobacter formigenes ... 55 7e-07 UniRef50_C4XNB5 2'-5' RNA ligase n=1 Tax=Desulfovibrio magneticu... 55 8e-07 UniRef50_B7GK61 2'-5' RNA ligase n=1 Tax=Anoxybacillus flavither... 55 9e-07 UniRef50_B5YJG0 2'-5' RNA ligase n=1 Tax=Thermodesulfovibrio yel... 55 1e-06 UniRef50_B1L7J5 2'-5' RNA ligase n=1 Tax=Candidatus Korarchaeum ... 55 1e-06 UniRef50_Q2FTJ3 2',5' RNA ligase n=1 Tax=Methanospirillum hungat... 55 1e-06 UniRef50_UPI000178815C 2''''-5'''' RNA ligase n=1 Tax=Geobacillu... 55 1e-06 UniRef50_Q0HML7 2'-5' RNA ligase n=8 Tax=Shewanella RepID=Q0HML7... 55 1e-06 UniRef50_C3BR82 2'-5' RNA ligase n=3 Tax=Bacillus RepID=C3BR82_9... 55 1e-06 UniRef50_B8FSV2 2'-5' RNA ligase n=2 Tax=Desulfitobacterium hafn... 55 1e-06 UniRef50_B8CXC1 2'-5' RNA ligase n=1 Tax=Halothermothrix orenii ... 55 1e-06 UniRef50_A8ZY65 2'-5' RNA ligase n=1 Tax=Desulfococcus oleovoran... 55 1e-06 UniRef50_D1C514 2'-5' RNA ligase n=1 Tax=Sphaerobacter thermophi... 55 1e-06 UniRef50_Q1GUY9 2',5' RNA ligase n=2 Tax=Sphingomonadales RepID=... 55 1e-06 UniRef50_Q2BMM5 2',5' RNA ligase n=1 Tax=Neptuniibacter caesarie... 54 2e-06 UniRef50_Q1NWG3 2',5' RNA ligase n=4 Tax=Deltaproteobacteria Rep... 54 2e-06 UniRef50_A8U4H0 2'-5' RNA ligase n=1 Tax=alpha proteobacterium B... 54 2e-06 UniRef50_A1RX48 2'-5' RNA ligase n=1 Tax=Thermofilum pendens Hrk... 54 2e-06 UniRef50_Q0AKK0 2'-5' RNA ligase n=1 Tax=Maricaulis maris MCS10 ... 54 2e-06 UniRef50_A3ZLX4 2'-5' RNA ligase n=1 Tax=Blastopirellula marina ... 54 2e-06 UniRef50_Q2NI02 Predicted 2'-5' RNA ligase n=1 Tax=Methanosphaer... 54 2e-06 UniRef50_Q28V17 2'5' RNA ligase n=1 Tax=Jannaschia sp. CCS1 RepI... 54 3e-06 UniRef50_Q46QC5 2',5' RNA ligase n=4 Tax=Cupriavidus RepID=Q46QC... 54 3e-06 UniRef50_C0EIB1 Putative uncharacterized protein n=1 Tax=Clostri... 54 3e-06 UniRef50_Q11D05 2'-5' RNA ligase n=26 Tax=Rhizobiales RepID=Q11D... 54 3e-06 UniRef50_B9KQ60 2'-5' RNA ligase n=4 Tax=Rhodobacter sphaeroides... 54 3e-06 UniRef50_B0SWI1 2'-5' RNA ligase n=1 Tax=Caulobacter sp. K31 Rep... 53 4e-06 UniRef50_A8FGD3 2'-5' RNA ligase n=2 Tax=Bacillus pumilus RepID=... 53 4e-06 UniRef50_C8X1G4 2'-5' RNA ligase n=1 Tax=Desulfohalobium retbaen... 53 5e-06 UniRef50_C6J532 2'-5' RNA ligase n=1 Tax=Paenibacillus sp. oral ... 53 5e-06 UniRef50_C1TRT5 2'-5' RNA ligase n=1 Tax=Dethiosulfovibrio pepti... 53 5e-06 UniRef50_Q6MIS1 Putative 2'-5' RNA ligase n=1 Tax=Bdellovibrio b... 53 6e-06 UniRef50_D1ZYF9 Whole genome shotgun sequence assembly, contig_3... 53 6e-06 UniRef50_A5V4K1 2'-5' RNA ligase n=1 Tax=Sphingomonas wittichii ... 52 7e-06 UniRef50_A3UI27 Putative uncharacterized protein n=1 Tax=Oceanic... 52 7e-06 UniRef50_B1ZYS3 2'-5' RNA ligase n=1 Tax=Opitutus terrae PB90-1 ... 52 7e-06 UniRef50_A9KM39 2'-5' RNA ligase n=1 Tax=Clostridium phytofermen... 52 7e-06 UniRef50_C6CZ97 2'-5' RNA ligase n=1 Tax=Paenibacillus sp. JDR-2... 52 8e-06 UniRef50_D1Y2L4 2'-5' RNA ligase n=1 Tax=Pyramidobacter piscolen... 52 8e-06 UniRef50_Q8EP21 ABC transporter permease n=1 Tax=Oceanobacillus ... 52 8e-06 UniRef50_Q5FPP9 2'-5' RNA ligase n=1 Tax=Gluconobacter oxydans R... 52 1e-05 UniRef50_C1YG14 2'-5' RNA ligase n=1 Tax=Nocardiopsis dassonvill... 52 1e-05 UniRef50_Q0BX97 2'-5' RNA ligase n=1 Tax=Hyphomonas neptunium AT... 51 1e-05 UniRef50_Q3Z6J0 2'-5' RNA ligase family protein n=5 Tax=Dehaloco... 51 1e-05 UniRef50_Q2LPL4 2'-5' RNA ligase n=1 Tax=Syntrophus aciditrophic... 51 1e-05 UniRef50_A8F8W1 2'-5' RNA ligase n=1 Tax=Thermotoga lettingae TM... 51 2e-05 UniRef50_A3CSA5 2'-5' RNA ligase n=1 Tax=Methanoculleus marisnig... 51 2e-05 UniRef50_D2B7J8 2'-5' RNA ligase n=1 Tax=Streptosporangium roseu... 51 2e-05 UniRef50_A4EPW8 2'-5' RNA ligase n=1 Tax=Roseobacter sp. SK209-2... 51 2e-05 UniRef50_B3E0C6 2'-5' RNA ligase n=1 Tax=Methylacidiphilum infer... 51 2e-05 UniRef50_A9FR36 Putative uncharacterized protein n=1 Tax=Sorangi... 51 2e-05 UniRef50_Q74MW1 NEQ502 n=1 Tax=Nanoarchaeum equitans RepID=Q74MW... 50 2e-05 UniRef50_B0K2A3 2'-5' RNA ligase n=9 Tax=Thermoanaerobacter RepI... 50 3e-05 UniRef50_A8G077 2'-5' RNA ligase n=1 Tax=Shewanella sediminis HA... 50 3e-05 UniRef50_A4TU26 2',5' RNA ligase n=1 Tax=Magnetospirillum gryphi... 50 3e-05 UniRef50_B5IAZ8 2'-5' RNA ligase n=2 Tax=Aciduliprofundum boonei... 50 3e-05 UniRef50_A6TLD2 2'-5' RNA ligase n=1 Tax=Alkaliphilus metallired... 50 3e-05 UniRef50_A1SDD3 2'-5' RNA ligase n=2 Tax=Nocardioidaceae RepID=A... 50 3e-05 UniRef50_Q07Y05 Putative 2'-5' RNA ligase n=1 Tax=Shewanella fri... 50 4e-05 UniRef50_C5CES3 2'-5' RNA ligase n=1 Tax=Kosmotoga olearia TBF 1... 50 4e-05 UniRef50_C1P948 2'-5' RNA ligase n=1 Tax=Bacillus coagulans 36D1... 50 5e-05 UniRef50_A5UJ81 2'-5' RNA ligase, LigT n=3 Tax=Methanobrevibacte... 49 5e-05 UniRef50_C1F3J7 2'-5' RNA ligase n=1 Tax=Acidobacterium capsulat... 49 6e-05 UniRef50_B0T6B2 2'-5' RNA ligase n=5 Tax=Caulobacteraceae RepID=... 49 7e-05 UniRef50_A7VYB6 Putative uncharacterized protein n=1 Tax=Clostri... 49 7e-05 UniRef50_A8UTL9 Putative uncharacterized protein n=1 Tax=Hydroge... 49 8e-05 UniRef50_C0ZGV0 Putative uncharacterized protein n=1 Tax=Breviba... 49 8e-05 UniRef50_A6CQH7 Putative uncharacterized protein n=1 Tax=Bacillu... 49 8e-05 UniRef50_B1I1T7 2'-5' RNA ligase n=1 Tax=Candidatus Desulforudis... 49 9e-05 UniRef50_C0GSW7 2'-5' RNA ligase n=1 Tax=Desulfonatronospira thi... 49 9e-05 UniRef50_A8V0J3 Putative uncharacterized protein n=1 Tax=Hydroge... 49 1e-04 UniRef50_B8FL01 2'-5' RNA ligase n=1 Tax=Desulfatibacillum alken... 48 1e-04 UniRef50_Q6AKT9 Putative uncharacterized protein n=1 Tax=Desulfo... 48 1e-04 UniRef50_A6AKQ4 2'-5' RNA ligase n=3 Tax=Vibrio harveyi RepID=A6... 48 1e-04 UniRef50_B2A6J9 2'-5' RNA ligase n=1 Tax=Natranaerobius thermoph... 48 2e-04 UniRef50_Q7UM43 Putative uncharacterized protein n=1 Tax=Rhodopi... 47 2e-04 UniRef50_Q1ARL5 2',5' RNA ligase n=1 Tax=Rubrobacter xylanophilu... 47 2e-04 UniRef50_D0LIM3 2'-5' RNA ligase n=1 Tax=Haliangium ochraceum DS... 47 3e-04 UniRef50_B9JCJ4 2'-5' RNA ligase n=44 Tax=Rhizobiales RepID=B9JC... 47 3e-04 UniRef50_Q12W73 2'-5' RNA ligase n=4 Tax=Methanosarcinaceae RepI... 47 3e-04 UniRef50_A7NPU2 2'-5' RNA ligase n=2 Tax=Roseiflexus RepID=A7NPU... 47 3e-04 UniRef50_C4RLS5 2'-5' RNA ligase n=2 Tax=Micromonospora RepID=C4... 47 3e-04 UniRef50_B6JCZ3 2'-5' RNA ligase n=13 Tax=Alphaproteobacteria Re... 47 3e-04 UniRef50_D0MJ05 2'-5' RNA ligase n=1 Tax=Rhodothermus marinus DS... 47 3e-04 UniRef50_B5Y8R2 2'-5' RNA ligase n=1 Tax=Coprothermobacter prote... 47 4e-04 UniRef50_Q0FJZ2 2'-5' RNA ligase n=2 Tax=Rhodobacteraceae RepID=... 47 4e-04 UniRef50_C7Q269 2'-5' RNA ligase n=1 Tax=Catenulispora acidiphil... 47 4e-04 UniRef50_A8VWN7 2'-5' RNA ligase n=1 Tax=Bacillus selenitireduce... 47 4e-04 UniRef50_A0LR27 2'-5' RNA ligase n=1 Tax=Acidothermus cellulolyt... 47 4e-04 UniRef50_UPI0001C31E9E 2''''-5'''' RNA ligase n=1 Tax=Conexibact... 47 4e-04 UniRef50_O57823 UPF0097 protein PH0099 n=10 Tax=Euryarchaeota Re... 46 4e-04 UniRef50_D2LR69 2'-5' RNA ligase n=1 Tax=Bacillus cellulosilytic... 46 5e-04 UniRef50_Q0F3T5 2`-5` RNA ligase, putative n=1 Tax=Mariprofundus... 46 5e-04 UniRef50_Q2S292 2'-5' RNA ligase n=1 Tax=Salinibacter ruber DSM ... 46 7e-04 UniRef50_B4X1Z9 2'-5' RNA ligase n=2 Tax=Alcanivorax RepID=B4X1Z... 45 7e-04 UniRef50_C6BS46 2'-5' RNA ligase n=1 Tax=Desulfovibrio salexigen... 45 7e-04 UniRef50_A6FXB0 2',5' RNA ligase n=1 Tax=Plesiocystis pacifica S... 45 8e-04 UniRef50_A0RYQ5 2'-5' RNA ligase n=1 Tax=Cenarchaeum symbiosum R... 45 8e-04 UniRef50_Q1BHE5 2',5' RNA ligase n=12 Tax=Burkholderiaceae RepID... 45 0.001 UniRef50_Q3A1W4 2'-5' RNA ligase n=1 Tax=Pelobacter carbinolicus... 45 0.001 UniRef50_Q9K7T9 ABC transporter (Permease) n=1 Tax=Bacillus halo... 45 0.001 UniRef50_B8GHT8 2'-5' RNA ligase n=1 Tax=Methanosphaerula palust... 45 0.001 UniRef50_C1CXY4 Putative 2`-5` RNA ligase n=1 Tax=Deinococcus de... 45 0.001 UniRef50_D2S8G3 2'-5' RNA ligase n=1 Tax=Geodermatophilus obscur... 45 0.001 UniRef50_A4BK99 2'-5' RNA ligase n=1 Tax=Reinekea blandensis MED... 45 0.001 UniRef50_C3NHZ6 2'-5' RNA ligase n=11 Tax=Sulfolobus RepID=C3NHZ... 45 0.002 UniRef50_D2MH67 2'-5' RNA ligase n=1 Tax=Candidatus Poribacteria... 45 0.002 UniRef50_Q65G06 2'_5' RNA ligase YtlP n=1 Tax=Bacillus lichenifo... 44 0.002 UniRef50_C4DT00 2'-5' RNA ligase n=1 Tax=Stackebrandtia nassauen... 44 0.002 UniRef50_A1KCB4 2'-5' RNA ligase n=2 Tax=Betaproteobacteria RepI... 44 0.002 UniRef50_B9LUM8 2'-5' RNA ligase n=7 Tax=Halobacteriaceae RepID=... 44 0.002 UniRef50_A0B6Z0 2'-5' RNA ligase n=1 Tax=Methanosaeta thermophil... 44 0.002 UniRef50_B2SRS6 2'-5' RNA ligase n=9 Tax=Xanthomonas RepID=B2SRS... 44 0.002 UniRef50_B5HLE7 2',5' RNA ligase n=6 Tax=Streptomyces RepID=B5HL... 44 0.003 UniRef50_O26683 UPF0097 protein MTH_583 n=1 Tax=Methanothermobac... 44 0.003 UniRef50_Q21UK0 2',5' RNA ligase n=1 Tax=Rhodoferax ferrireducen... 44 0.003 UniRef50_B3QXR5 Phosphoesterase HXTX n=1 Tax=Chloroherpeton thal... 44 0.003 UniRef50_C9N809 2'-5' RNA ligase n=2 Tax=Streptomyces RepID=C9N8... 44 0.003 UniRef50_O66967 UPF0097 protein aq_768 n=2 Tax=Aquificaceae RepI... 44 0.003 UniRef50_Q8TVM2 2'-5' RNA ligase n=1 Tax=Methanopyrus kandleri R... 44 0.003 UniRef50_Q2RN52 2',5' RNA ligase n=1 Tax=Rhodospirillum rubrum A... 44 0.003 UniRef50_A6C5P9 2'-5' RNA ligase n=1 Tax=Planctomyces maris DSM ... 43 0.004 UniRef50_B5H0L7 2',5' RNA ligase n=2 Tax=Streptomyces RepID=B5H0... 43 0.004 UniRef50_C4L4Q9 2'-5' RNA ligase n=1 Tax=Exiguobacterium sp. AT1... 43 0.004 UniRef50_D2LH53 2'-5' RNA ligase n=1 Tax=Rhodomicrobium vannieli... 43 0.005 UniRef50_Q1PYI6 Similar to 2'-5' RNA ligase n=1 Tax=Candidatus K... 43 0.006 UniRef50_D1WYH2 2'-5' RNA ligase n=2 Tax=Streptomyces RepID=D1WY... 42 0.006 UniRef50_C6XKV8 2'-5' RNA ligase n=1 Tax=Hirschia baltica ATCC 4... 42 0.006 UniRef50_Q2B4M3 Putative uncharacterized protein n=1 Tax=Bacillu... 42 0.007 UniRef50_C8W3K6 2'-5' RNA ligase n=1 Tax=Desulfotomaculum acetox... 42 0.007 UniRef50_D1A6E1 2'-5' RNA ligase n=1 Tax=Thermomonospora curvata... 42 0.007 UniRef50_Q0W551 2'-5' RNA ligase n=1 Tax=uncultured methanogenic... 42 0.008 UniRef50_B8GVT8 2'-5' RNA ligase n=2 Tax=Caulobacter vibrioides ... 42 0.009 UniRef50_C7MQW1 2'-5' RNA ligase n=1 Tax=Saccharomonospora virid... 41 0.019 UniRef50_A7HSX7 2'-5' RNA ligase n=1 Tax=Parvibaculum lavamentiv... 41 0.022 UniRef50_A3TFV9 Putative uncharacterized protein n=1 Tax=Janibac... 40 0.023 UniRef50_B2T575 Phosphoesterase HXTX n=6 Tax=Burkholderiales Rep... 40 0.027 UniRef50_A8M0B6 2'-5' RNA ligase n=2 Tax=Salinispora RepID=A8M0B... 40 0.029 UniRef50_B6J032 2'-5' RNA ligase n=6 Tax=Coxiella burnetii RepID... 40 0.032 UniRef50_C7LNR7 2'-5' RNA ligase n=1 Tax=Desulfomicrobium bacula... 40 0.040 UniRef50_Q12JD3 2',5' RNA ligase n=1 Tax=Shewanella denitrifican... 40 0.046 UniRef50_Q67NU4 Putative uncharacterized protein n=1 Tax=Symbiob... 39 0.067 UniRef50_D1ULJ6 Phosphoesterase HXTX n=1 Tax=Burkholderia sp. CC... 39 0.068 UniRef50_A8L7H3 2'-5' RNA ligase n=2 Tax=Frankia RepID=A8L7H3_FRASN 39 0.073 UniRef50_A4YHN8 2'-5' RNA ligase n=1 Tax=Metallosphaera sedula D... 39 0.079 >UniRef50_P37025 2'-5'-RNA ligase n=156 Tax=Enterobacteriaceae RepID=LIGT_ECOLI Length = 176 Score = 360 bits (923), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 176/176 (100%), Positives = 176/176 (100%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL 60 MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL Sbjct: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL 60 Query: 61 SLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 SLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR Sbjct: 61 SLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 Query: 121 PFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ 176 PFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ Sbjct: 121 PFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ 176 >UniRef50_Q02P23 2'-5' RNA ligase n=7 Tax=Pseudomonas RepID=Q02P23_PSEAB Length = 182 Score = 95.9 bits (237), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 72/171 (42%), Positives = 90/171 (52%), Gaps = 6/171 (3%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLFFA+ P + E+I WR P GR VA NLHLTLAFLG+V + + +AL +A Sbjct: 7 RLFFALPCPPPLAERIGRWRDDQ--PLPGRQVATANLHLTLAFLGQVPSARLEALLDMAA 64 Query: 66 RIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPH 125 I F L LD +W R+ ++ L QPP L++L LRS A RPF H Sbjct: 65 AIEAAPFDLCLDRLLRW-RNGILLLAPSQPPGALLRLRRALRSGLAELELPVETRPFSAH 123 Query: 126 ITLLRDASEAVTI-PPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALT 175 +TL RDA+ I PPP F W V F+L+ S RY L RWAL Sbjct: 124 LTLARDAAPLEDIPPPPTFVWQ--VDHFSLFCSQNDAAGVRYRTLGRWALC 172 >UniRef50_Q15YM1 2'-5' RNA ligase n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15YM1_PSEA6 Length = 176 Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 57/171 (33%), Positives = 83/171 (48%), Gaps = 8/171 (4%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALS-LLA 64 R FFA+ P + I WR FP + PV A N H+TLAFLG ++ + +LS + Sbjct: 2 RAFFALTPPGTTKLAIETWRDKAFP-QFYSPVKASNFHITLAFLGNINESQLDSLSQYID 60 Query: 65 GRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHP 124 + F LTLD G W + + +WLG Q + + L +L+ + G R + Sbjct: 61 AHLNTQCFLLTLDYVGYWSKPKALWLGNTQVSKEQLDLVALLQKASPACGITMQKRDYIS 120 Query: 125 HITLLRDASE---AVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRW 172 H+TL R SE A I P N+++ TE TLY S+ + Y P+ W Sbjct: 121 HLTLARKCSENPPAALIEP---NFAFQATELTLYESASSAHGVTYRPILTW 168 >UniRef50_B8GQV2 2'-5' RNA ligase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GQV2_THISH Length = 188 Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 67/175 (38%), Positives = 82/175 (46%), Gaps = 8/175 (4%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL 60 + PQRLFFA+ E R + WR P GRP AA NLHLTLAF G+V AE L Sbjct: 5 LDTPQRLFFALWPSDEARAALAGWR-DALPRPGGRPTAARNLHLTLAFAGDVDAETRTCL 63 Query: 61 SLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 A R+R F+L LD G + R ++W G P L LA L G Sbjct: 64 EQAAARVRGEPFSLPLDRLGVFKRG-LLWTGPADCPAALSTLAGDLAGVLRDCGVRPDPC 122 Query: 121 PFHPHITLLRDASEAV-TIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 PFH HITL+R + + + PPG W F L S +G Y LK + L Sbjct: 123 PFHAHITLIRRMNGRLPGVDPPGLTWQ--AKAFCLVRSRPGQG---YEVLKTYPL 172 >UniRef50_C4L922 2'-5' RNA ligase n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L922_TOLAT Length = 178 Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 64/170 (37%), Positives = 79/170 (46%), Gaps = 6/170 (3%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGR-PVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLFFA LPA+ +H E R PV A+N HLTL FLG L +A Sbjct: 4 RLFFA--LPAQSVASALHHCQQQLHEEGHRKPVNANNFHLTLHFLGMQDEHILPQLYQVA 61 Query: 65 GRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHP 124 +R P F LTLD G + + +WLG + P L+ L N L + G S + P Sbjct: 62 AELRSPPFELTLDQYGLFRHAHCLWLGPQHPAPPLLHLVNRLGESLTQLGLPVSTD-YRP 120 Query: 125 HITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 HITL R+A P P V+EF LY S A Y PL+RW L Sbjct: 121 HITLFRNARAMTQCPAPALRLQ--VSEFILYESISAADGVWYKPLRRWPL 168 >UniRef50_C4ZJW1 2'-5' RNA ligase n=1 Tax=Thauera sp. MZ1T RepID=C4ZJW1_THASP Length = 186 Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 63/175 (36%), Positives = 84/175 (48%), Gaps = 9/175 (5%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAG-RPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLFFA+ A R + H RA E G R + D +HLTLAFLGE + + L +A Sbjct: 15 RLFFALWPDAATRAGL-HARARALHSECGGRAMRRDTIHLTLAFLGETPVRQVERLRAVA 73 Query: 65 GRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHP 124 ++ GF L LD G W R+R++W G P L LA L + GC R F P Sbjct: 74 AGVQGEGFALDLDRVGSWHRNRILWTGPSMVPPALAALAQDLEGRLRADGCALEARAFSP 133 Query: 125 HITLLRDASEA---VTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ 176 H+TL+R+A A + P W+ V F L AS + Y + RW L + Sbjct: 134 HVTLVRNAHAAPREAQLAP--LRWT--VGSFVLVASELSAAGAHYRTIGRWPLKR 184 >UniRef50_Q60BS9 Putative 2'-5' RNA ligase n=1 Tax=Methylococcus capsulatus RepID=Q60BS9_METCA Length = 190 Score = 89.0 bits (219), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 80/159 (50%) Query: 8 FFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAGRI 67 FFA+ A +RE + + GR V D LHLTLAFLG V AE+ L+ + G + Sbjct: 14 FFALWPDAGVRETLGRLVRSLRRTVKGRWVEPDKLHLTLAFLGAVPAERLPELTAMTGDL 73 Query: 68 RQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPHIT 127 P F L LD W R+RV+ LG P LI+L +L S+ R+G RPF PH+T Sbjct: 74 DLPPFELALDRLEYWQRNRVLCLGASATPPLLIELVGILNSKLGRAGFPVERRPFRPHLT 133 Query: 128 LLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRY 166 L R A A + P + ++ V TL S +R Y Sbjct: 134 LARKAEAAWSAMPLKTSVTWPVDRVTLVESRLSRAGPLY 172 >UniRef50_Q3JCL1 2',5' RNA ligase n=2 Tax=Nitrosococcus oceani RepID=Q3JCL1_NITOC Length = 177 Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 64/180 (35%), Positives = 81/180 (45%), Gaps = 14/180 (7%) Query: 3 EPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSL 62 E QRLFFA+ AEIREQ A + G+ V ++NLHLTL FLG + ++ Sbjct: 6 ETQRLFFALWPGAEIREQATQI-AQRMLGKRGKCVRSENLHLTLVFLGSTTEQQRACAEA 64 Query: 63 LAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 +A I F L L+ G W R RVVWL R+ P+ LI+L L G RP+ Sbjct: 65 VADTIEGTAFALRLEQIGYWSRPRVVWLAPRETPQPLIELVQQLNQGLTACGYQPEARPY 124 Query: 123 HPHITLLRD------ASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ 176 H+TL R A E + P V F L S G Y L+ W L Q Sbjct: 125 RAHMTLARKVAGYFPAREVAPLACP-------VEHFYLVRSVSYPGGVEYQVLRSWPLAQ 177 >UniRef50_A1AS05 2'-5' RNA ligase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AS05_PELPD Length = 186 Score = 85.9 bits (211), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 65/181 (35%), Positives = 90/181 (49%), Gaps = 16/181 (8%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF AIDLP +R+ + + P R V AD LHLTLAFLG+V E+ L+ Sbjct: 3 RLFIAIDLPEVVRQDLCRL---NVPIPGSRWVPADQLHLTLAFLGDVGEERVAGLARALD 59 Query: 66 RIRQPGFTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCF-QSNRP 121 ++ F L D G + R RV+W+G++ P L+ LA+ LR + R C Q RP Sbjct: 60 QVSAAPFRLRFDRLGCFPSRARPRVLWVGLKPEPL-LLSLADRLR-EFLRDCCIPQEERP 117 Query: 122 FHPHITL-------LRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 F PHITL R+ + + P S + EF L+ S +TPLKR+ L Sbjct: 118 FSPHITLARLKLPAARECASFLDRPLALERTSVSAQEFILFESLLTAAGAIHTPLKRFPL 177 Query: 175 T 175 + Sbjct: 178 S 178 >UniRef50_A0KP01 2'-5' RNA ligase n=2 Tax=Aeromonas RepID=A0KP01_AERHH Length = 179 Score = 85.5 bits (210), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 63/171 (36%), Positives = 81/171 (47%), Gaps = 8/171 (4%) Query: 6 RLFFAIDLPAE-IREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 +LFFA LPAE + ++ WR P G+PV A NLHLTLAFLGE L Sbjct: 7 KLFFA--LPAEALAPDLVAWRDQL--PWPGQPVPAANLHLTLAFLGEADPLTTTRLMAAV 62 Query: 65 GRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHP 124 R P T+ L++ G + R++ W+G + P L LA LR + G + + P Sbjct: 63 ERQHCPPLTIALNETGWFGRAKAAWVGPTEWPNELTVLARALRRHGEKLGLGNGEQGYRP 122 Query: 125 HITLLRDASE-AVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 H+TL R ASE +P P F F LY S RY PL W L Sbjct: 123 HVTLSRKASEPPALLPAPDF--VLQADRFCLYQSLSTPDGVRYEPLACWPL 171 >UniRef50_Q1IPR0 2',5' RNA ligase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IPR0_ACIBL Length = 190 Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 65/193 (33%), Positives = 94/193 (48%), Gaps = 27/193 (13%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLFFA+D+P+EIR + + + R +A ++ H+TL FLGEV + E+A S +A Sbjct: 2 RLFFALDIPSEIRRSLTDYVDSLRRVPGVRFMAPESYHVTLKFLGEVQ-DVERAKSAVA- 59 Query: 66 RIRQPGFTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 +R P F + D G + + RV W G+ GL LA L A++G + +RPF Sbjct: 60 TVRSPRFEVAFCDVGFFPNAKAPRVFWAGIHAD-EGLPNLATALEDALAQAGFPREDRPF 118 Query: 123 HPHITLLRDASE--------------------AVTIPPPGFNWSYAVTEFTLYASSFARG 162 HPH+TL R+ S A PPP F + +EF LY S + Sbjct: 119 HPHLTLARNGSGSPRPRGDEQPVAGFRALVYLAEKNPPPEFG-TMTASEFFLYESKLSPR 177 Query: 163 RTRYTPLKRWALT 175 +Y L R+ LT Sbjct: 178 GAQYNKLARFPLT 190 >UniRef50_A4XVF3 2'-5' RNA ligase n=1 Tax=Pseudomonas mendocina ymp RepID=A4XVF3_PSEMY Length = 181 Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 62/173 (35%), Positives = 80/173 (46%), Gaps = 5/173 (2%) Query: 2 SEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALS 61 ++P R FFA+ P + I WRA AG+ VA NLHLTLAFLG A L Sbjct: 3 NDPLRPFFALPCPPHLAAAIGAWRADAL--GAGKAVAVHNLHLTLAFLGSQPASCVAPLL 60 Query: 62 LLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 LA I+ TL LD G W R ++ L Q P+ L +L L ++ + R Sbjct: 61 ALATEIQGERCTLQLDRLGLW-RGGLLHLAPSQVPQALERLQQQLHARLLAASFVLEERA 119 Query: 122 FHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 F PH+TL R P P F+W + F L+ S TRY L +W L Sbjct: 120 FRPHLTLARHYPNPPNCPAPTFDWP--LRHFALFCSENDGRGTRYRQLGQWPL 170 >UniRef50_Q2Z065 Putative 2'-5' RNA ligase n=1 Tax=uncultured gamma proteobacterium RepID=Q2Z065_9GAMM Length = 179 Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 61/174 (35%), Positives = 80/174 (45%), Gaps = 5/174 (2%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 +R+FF ++ AE I WR + G+PV A N H+TLAF+GE+ + LS A Sbjct: 2 KRVFFGLEPDAETCRGIADWRDRQTSCD-GQPVPAANFHITLAFVGELHDAALERLSRAA 60 Query: 65 ----GRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 + G LT++DAG W R + WLG P L QL+ L A G + R Sbjct: 61 DDWFAQGVAHGGNLTINDAGYWPRPGIFWLGPTHWPESLQQLSQKLGLLAGAVGGKRDRR 120 Query: 121 PFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 PF PHITL R A T P ++ TL+ S R Y L W L Sbjct: 121 PFQPHITLYRRCRTAPTAPLQLPTFTLRYRHCTLFESRQGRQGVSYQALLDWPL 174 >UniRef50_Q2Y753 2',5' RNA ligase n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y753_NITMU Length = 195 Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 58/172 (33%), Positives = 81/172 (47%), Gaps = 4/172 (2%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLFFAI E Q+ GR A+N+HLTL F+GEV+A + +AL A Sbjct: 11 RLFFAIWPDKETCMQLDRLTGRLASVCEGRKTKAENIHLTLVFVGEVNASQVEALCRAAD 70 Query: 66 RIRQPG---FTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 I G F L ++ W R +V+ + + PR L+ L L+S + G R + Sbjct: 71 EIEGHGVRAFDLVIERICVWKRKNIVYAEINEVPRPLMDLVEALQSSLSLVGFSLEERSY 130 Query: 123 HPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 PHITL+R+AS T+P + E+ L S YTP+ RW L Sbjct: 131 KPHITLMRNAS-CKTLPERAEPMVWRAREWVLVKSDQTSDGPVYTPIGRWFL 181 >UniRef50_C1DGI0 2-5 RNA ligase protein n=1 Tax=Azotobacter vinelandii DJ RepID=C1DGI0_AZOVD Length = 176 Score = 82.0 bits (201), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 65/171 (38%), Positives = 78/171 (45%), Gaps = 6/171 (3%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLFF + LP E I WR GRPVA NLHLTLAFL E+ L L Sbjct: 7 RLFFGLPLPHRQAEAIDRWRREL--GLDGRPVARRNLHLTLAFLDSHPLERLAELQCLGE 64 Query: 66 RIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPH 125 IR F + LD + R +V LG Q P L+QLA L+ +G R F PH Sbjct: 65 GIRGNAFEMKLDRL-ETGRHGLVCLGTGQAPEALLQLAGELQRLLRGAGYALDERAFWPH 123 Query: 126 ITLLRDA-SEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALT 175 +TL RD + + PP F W F L+ S+ T Y PL W L Sbjct: 124 LTLARDCRNPPLPASPPDFRWR--AERFVLFHSTSDAQGTLYRPLFHWPLV 172 >UniRef50_A3QHP4 2'-5' RNA ligase n=1 Tax=Shewanella loihica PV-4 RepID=A3QHP4_SHELP Length = 176 Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 61/175 (34%), Positives = 84/175 (48%), Gaps = 8/175 (4%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSL-- 62 +RLF AI A EQ+ +A+ GR V DNLH+TLAFLG+ S +++ALS Sbjct: 2 KRLFLAIAPDAAQLEQLTQLQAS--LDGEGRLVPRDNLHMTLAFLGQCSEAQQEALSESL 59 Query: 63 --LAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 LA + R P F +TL+ W++ +++ L GLI L N + A + G S Sbjct: 60 ARLAHQRRLPTFEVTLNTLEHWVKPKILCLKGAARDPGLISLFNQCQRLAQQLGLHTSEH 119 Query: 121 PFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALT 175 F PHITL+R A + P + S LY S + Y L W LT Sbjct: 120 SFTPHITLMRKAKMLPELKAPSLSLSGHA--LHLYHSQSSEQGVLYKVLASWPLT 172 >UniRef50_C6MFU4 2'-5' RNA ligase n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MFU4_9PROT Length = 181 Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 7/172 (4%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 R+FFAI ++++Q+I+ G + +LH+TL FLG +S + + L +A Sbjct: 13 RVFFAIFPNRQVQKQLIYHSEMLESIYGGHKIKMQHLHITLLFLGNISIHQIQTLQQIAK 72 Query: 66 RIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPH 125 I F L LD G W + ++++ ++ P L L + L+ + +G NR + PH Sbjct: 73 MISAKKFELKLDIIGYWKHNHIIYIKAKEFPTELFSLTDSLKIALSENGFVFDNRAYKPH 132 Query: 126 ITLLRDASEAVT---IPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 IT+LR + I P + V ++ L S Y PL W L Sbjct: 133 ITILRKTICHINTNMIKPI----QWCVNQWFLIQSQPTHYGVEYIPLNHWHL 180 >UniRef50_Q5NYK1 2'-5' RNA ligase n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NYK1_AZOSE Length = 201 Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 11/178 (6%) Query: 2 SEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALS 61 +P R+FFA+ A + +++ A GR + LHLTLAF+G+VS ++ L Sbjct: 9 GKPSRVFFALWPDARVAKRLDELGAEAHAECGGRRTRCETLHLTLAFIGDVSPQRLAELI 68 Query: 62 LLAGRIRQP----GFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQ 117 + +R FTL LD G W +R+VW G + P L L L + Sbjct: 69 AVGNEVRNDREATSFTLRLDLLGSWRHNRIVWAGAQSCPAPLAGLVERLNGALEAADFAV 128 Query: 118 SNRPFHPHITLLRDASEAVT---IPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRW 172 RPF PH+TLLR A V+ + P +W V F L S Y L+ W Sbjct: 129 ERRPFAPHVTLLRKAHTQVSTRCVDP--IDWP--VDGFVLVESVQTSTGAHYRTLREW 182 >UniRef50_C7R810 2'-5' RNA ligase n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R810_KANKD Length = 183 Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 57/173 (32%), Positives = 81/173 (46%), Gaps = 14/173 (8%) Query: 6 RLFFAIDLPAEIREQI-IHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLFFAIDLP + Q+ + R P AGRPV+ N H+TL FLGE+ + L + Sbjct: 3 RLFFAIDLPQAHKNQLELLQRQC---PFAGRPVSPHNFHITLLFLGELP---DNQLGDIL 56 Query: 65 GRIRQPG---FTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQS--N 119 I P F + L + ++ V L + P LI+L +R ++G N Sbjct: 57 DAIEVPVIKPFEIKLKQFAYYPKAEVGCLEVA-PNEQLIELHQHIRKNLKQAGIHIKLPN 115 Query: 120 RPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRW 172 +PF PHITL RDA+ I ++ V F L S F + Y ++ W Sbjct: 116 KPFRPHITLYRDATVQSDI-SHSVDFQLKVDHFCLMESQFNQKGVYYEVIEEW 167 >UniRef50_C0N774 2'-5' RNA ligase n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N774_9GAMM Length = 170 Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 56/173 (32%), Positives = 79/173 (45%), Gaps = 9/173 (5%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 +RLFFA+ R+QI F P+ R + DNLH+TL FLG V A+ A Sbjct: 2 KRLFFALWPDNNSRQQIAQINQQIFFPDI-RKLIPDNLHITLVFLGNVDDAIATAVQQRA 60 Query: 65 GRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHP 124 G I P +L ++ W++ ++V L ++ P+ + QL N L + A RP+ Sbjct: 61 GDIIAPPISLEFNELDYWVKPKIVCLTCQRQPKAVYQLVNALTAMLAEYPVRVEQRPYRA 120 Query: 125 HITLLRDASEAVTIPPPGFNWSYAVTE---FTLYASSFARGRTRYTPLKRWAL 174 HITL R A + P N+S V F L S RY +RW L Sbjct: 121 HITLARKAKQR-----PELNFSPVVINADSFALVESISTEKGVRYQVRERWLL 168 >UniRef50_A1WW74 2'-5' RNA ligase n=1 Tax=Halorhodospira halophila SL1 RepID=A1WW74_HALHL Length = 174 Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 62/157 (39%), Positives = 80/157 (50%), Gaps = 5/157 (3%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL 60 M+E QRLFFA+ PA +RE++ + GRPVAA+ LHLT+AFLG S + Sbjct: 1 MTERQRLFFALWPPAHLRERLTAVQGELG--RIGRPVAAERLHLTVAFLGN-SDPERATE 57 Query: 61 SLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 + A GF L LD G ++RS VVW+ + P L L LR + R G R Sbjct: 58 AAAAATREARGFVLRLDRFGHFVRSGVVWMAPTEYPNALETLHRRLRRELRRRGLRTERR 117 Query: 121 PFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYAS 157 HPH+TL R A+ + P W V E TL AS Sbjct: 118 SLHPHVTLFRKATPSGPHPAASLEWP--VDELTLVAS 152 >UniRef50_Q0AGI2 2'-5' RNA ligase n=2 Tax=Nitrosomonas RepID=Q0AGI2_NITEC Length = 177 Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 58/175 (33%), Positives = 82/175 (46%), Gaps = 4/175 (2%) Query: 2 SEPQRLFFAIDLPAEI-REQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL 60 + P RLF A+ P +I R+Q+ +GR + NLHLTLAF+GE+ L Sbjct: 5 AHPVRLFLAL-WPQDIARDQLAKLARQLADDCSGRCIQPKNLHLTLAFMGEIDQGNIPRL 63 Query: 61 SLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRS-QAARSGCFQSN 119 A IRQ F LTLD W ++ VV G Q P L L L+ +A + Sbjct: 64 CQAAPAIRQSPFNLTLDKVCFWKKAGVVVAGTSQCPAELTTLVQDLQHLLSALRIRYDDT 123 Query: 120 RPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 PF PH+TL+R+ ++P + VT+++L S + Y L WAL Sbjct: 124 YPFTPHVTLVRNVRHC-SLPDSIQAIDWPVTQWSLAQSRQTPYESVYQSLADWAL 177 >UniRef50_A1S9X0 Putative 2'-5' RNA ligase n=1 Tax=Shewanella amazonensis SB2B RepID=A1S9X0_SHEAM Length = 175 Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 59/183 (32%), Positives = 76/183 (41%), Gaps = 20/183 (10%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL 60 MS+ QRLF L + E I+ + P G+ V NLH+TLAFLG+ S + + L Sbjct: 1 MSDAQRLFLGFALSDQEGESILKLQKRLGAP--GKTVEKANLHMTLAFLGQTSQRQCQRL 58 Query: 61 SLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 I P F LD W + VV L + GL L + +S G QS Sbjct: 59 EAALEGITMPKFEQRLDSLVHWRGAGVVCLWGQATDSGLTDLYHGCQSLCQNLGLHQSEH 118 Query: 121 PFHPHITLLRDAS---------EAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKR 171 F+PHITL R A E V + P N LY S+ RY L+ Sbjct: 119 DFNPHITLFRKAKQFSIPEWQPEPVILRPERLN---------LYLSNSTPAGVRYEVLQS 169 Query: 172 WAL 174 W L Sbjct: 170 WPL 172 >UniRef50_Q3AEX2 Putative 2'-5' RNA ligase n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AEX2_CARHZ Length = 177 Score = 72.0 bits (175), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 54/176 (30%), Positives = 82/176 (46%), Gaps = 7/176 (3%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLFFA+D P E++E+I F + VA +N HLTLAFLGE ++ + A Sbjct: 2 RLFFAVDFPEELKEKIHQDITPLFKYNGVKWVAKENYHLTLAFLGEKEEKELLQIDRAAK 61 Query: 66 RIRQPGFTLT-LDDAGQW---LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 + Q +L + D G + R +V++L + P GL+ LA LR + +P Sbjct: 62 SVPQVKESLIKVLDFGAFPNLKRPKVLFLKIESP--GLLTLAENLRQNLKENNISFDEKP 119 Query: 122 FHPHITLLRDASEAVTIPPPGFN-WSYAVTEFTLYASSFARGRTRYTPLKRWALTQ 176 F PH+T+ R E + P FN ++ F L S Y +K + + Q Sbjct: 120 FVPHLTIGRVKGEIKNLALPKFNPKEFSFKNFYLIKSILTPEGPIYEKIKSYEILQ 175 >UniRef50_B9Z7M0 2'-5' RNA ligase n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z7M0_9NEIS Length = 168 Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 58/170 (34%), Positives = 83/170 (48%), Gaps = 7/170 (4%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEA-GRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLFFAI +P + +H + G VAA+ LHLTLAFLGEV+ E+ L + Sbjct: 2 RLFFAI-IPDKSTSVSLHANGNLLAKHSRGHVVAAERLHLTLAFLGEVAPERLDELLAVG 60 Query: 65 GRI-RQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 R+ G T+D G W + +VW G QP L +L L+ A++G RP+ Sbjct: 61 ERLPLLAGEVWTIDRVGGW-PNGIVWAGSSQPCLVLSELVAALQQGLAQAGFPTETRPYV 119 Query: 124 PHITLLRDASEAVTIPPPGFN-WSYAVTEFTLYASSFARGRTRYTPLKRW 172 PH+TLLR A +PP + + + L S+ +Y L+RW Sbjct: 120 PHVTLLRRARH--RLPPQDISPLPFVLRRVLLMESTLTPQGPQYRELRRW 167 >UniRef50_C5V3P4 2'-5' RNA ligase n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V3P4_9PROT Length = 174 Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 53/154 (34%), Positives = 71/154 (46%), Gaps = 2/154 (1%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 R+FFA+ R + W+ GR + D LH TL FLGEV A + +AL L A Sbjct: 9 RVFFALWPDRTERGGLSGWQPPLLACCGGRVMRTDTLHATLVFLGEVEAVQLEALKLAAA 68 Query: 66 RIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPH 125 + F L D+A W + +V+ R P LI+L L R R + PH Sbjct: 69 EVSVARFELCFDEAHYWGHNHIVYAAPRTLPPQLIELVRELEQNLLRHRFAFERREYKPH 128 Query: 126 ITLLRDASEAVTIPPPGFNW-SYAVTEFTLYASS 158 ITLLR+A P PG + + V EF L S+ Sbjct: 129 ITLLRNA-HWTDKPLPGMSQVCWHVREFVLLESA 161 >UniRef50_Q3SK36 2',5' RNA ligase n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SK36_THIDA Length = 183 Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 56/174 (32%), Positives = 78/174 (44%), Gaps = 8/174 (4%) Query: 6 RLFFAI---DLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSL 62 RLFFA+ D + ++ W H+ GR + A+ LH+TLAFLG A++ AL Sbjct: 13 RLFFALWPDDATRDALDRTGKWLHRHW---GGRRMRAETLHITLAFLGTTPADRLDALIG 69 Query: 63 LAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 A I F L LD G W + V WLG + P + L L + G R Sbjct: 70 CADGIAAEPFALVLDRPGYWRHNHVGWLGASEAPPPHLALVTALNAALQAGGFPVDARAH 129 Query: 123 HPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ 176 PH+TLLR+ + P S+AV +F L S +Y ++RW L Sbjct: 130 VPHVTLLRNTAGGDL--PLCRPVSWAVPDFVLVRSRTDPTGAQYEVIRRWLLVH 181 >UniRef50_Q7P1N0 2'-5' RNA ligase n=1 Tax=Chromobacterium violaceum RepID=Q7P1N0_CHRVO Length = 174 Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 54/172 (31%), Positives = 77/172 (44%), Gaps = 12/172 (6%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 R F A P E +++ W+A GRP+ A LHLTLAFL +V+ + + L+ Sbjct: 2 RAFLACLPPPECLARLLAWQAGLRKQAGGRPLPAAQLHLTLAFLDDVTPLQLQ-LAADCA 60 Query: 66 RIRQPGF--TLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 PG + LD G W V W G +PP L + L++ +G RP+ Sbjct: 61 EKAAPGLPPAIVLDRCGSW--RGVGWCGPARPPPALGAWVSQLKAALGAAGIAVEARPYR 118 Query: 124 PHITLLRDASEAV---TIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRW 172 PH+TLLR + +PP + + E TL AS G R+ L W Sbjct: 119 PHLTLLRGLERPLPEQALPP----LALPLEEVTLLASELGAGGVRHHRLDGW 166 >UniRef50_B8CTB7 2'-5' RNA ligase, putative n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CTB7_SHEPW Length = 186 Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 53/174 (30%), Positives = 79/174 (45%), Gaps = 9/174 (5%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 +R+F L E +QI ++ PE R V + NLH+TLAF G S E AL Sbjct: 19 KRVFLGFALTTEQTKQIEAIQSQ--LPENVRLVPSQNLHMTLAFFGYASNETIDALINNI 76 Query: 65 GRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHP 124 + +P FT+ LD W + +++ L L+ +AN ++ A + QS ++P Sbjct: 77 DAMSKPHFTVHLDCIAHWKKPKILCLKGTASDPNLLSIANDSQTIAQKLKLHQSEYHYNP 136 Query: 125 HITLLRDASEAVTIPPPGFNWSYAVTE---FTLYASSFARGRTRYTPLKRWALT 175 HITL R A EAV G ++ + L+ S + Y L W LT Sbjct: 137 HITLSRKAKEAV----DGICYTALTLQPNALHLFESFAGKDGVEYPILHSWHLT 186 >UniRef50_Q47EL0 2',5' RNA ligase n=1 Tax=Dechloromonas aromatica RCB RepID=Q47EL0_DECAR Length = 193 Score = 68.6 bits (166), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 49/177 (27%), Positives = 84/177 (47%), Gaps = 7/177 (3%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 R+FFA+ AE+ +++ GR + +HLTLAFLGEV + L ++A Sbjct: 17 RVFFALWPSAEVADRLADMAGKAVASFGGRATRRETIHLTLAFLGEVPESRLPELCVVAD 76 Query: 66 RIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSG--CFQSNRPFH 123 ++ FT++LD G W + ++W G + P L +L LR A +G + F Sbjct: 77 GVQGQSFTMSLDRLGFWRHNHLLWAGSQAPVASLGELVGRLRHALANAGFKVDTEQQGFV 136 Query: 124 PHITLLRDASEAVTIPP----PGF-NWSYAVTEFTLYASSFARGRTRYTPLKRWALT 175 PH+TL+R + + P F + ++ F L SS + + Y L+ + ++ Sbjct: 137 PHVTLVRKIPASAGLLENQQFPSFESLAWRADRFVLVRSSLSPSGSEYLILREFFMS 193 >UniRef50_B4S0B5 2,5 RNA ligase n=2 Tax=Alteromonas macleodii RepID=B4S0B5_ALTMD Length = 217 Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 39/138 (28%), Positives = 69/138 (50%) Query: 37 VAADNLHLTLAFLGEVSAEKEKALSLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPP 96 V A N H+TL+FLGE++ + +AL ++ F+LTL+ G W ++++ P Sbjct: 63 VPAANFHITLSFLGEINHRQHEALVYELDQLVSEPFSLTLNATGLWNGPKILFAAPTDTP 122 Query: 97 RGLIQLANMLRSQAARSGCFQSNRPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYA 156 + L +LA + R A ++ NR + PH+T++R A+ + +P + V+ F L+ Sbjct: 123 KALSELAKLSRKAARKAAIEVENREYKPHVTVVRKATSTLPLPLYSPSVDVHVSAFHLFE 182 Query: 157 SSFARGRTRYTPLKRWAL 174 S Y + W L Sbjct: 183 SVTTPQGVTYPVRQSWPL 200 >UniRef50_A3K2S8 2',5' RNA ligase n=1 Tax=Sagittula stellata E-37 RepID=A3K2S8_9RHOB Length = 175 Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 56/177 (31%), Positives = 80/177 (45%), Gaps = 9/177 (5%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF A+ LP + R + + P GRPV +NLHLTLAFLG+ E +AL Sbjct: 1 MRLFIALSLPPDARGPLTALQ-ERLP--VGRPVPEENLHLTLAFLGDQPDEAVEALHDAL 57 Query: 65 GRIRQPGFTLTLDDAGQWLRSRVVWLGMR-QPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 +R P LTL A + +G+ + L ++ + +RS+ +G R F Sbjct: 58 STLRAPAVPLTLSGAALFGGKSGQAVGLEADGGKALTEMFDRVRSRLRSAGVRVERRRFR 117 Query: 124 PHITLLR-----DASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALT 175 PH+TL R DAS A+++ T F L+ S R Y L +AL Sbjct: 118 PHVTLARLKGGADASGALSVLAGASIGPVVATSFGLFRSHLNRDGAIYEALSVYALV 174 >UniRef50_B9ZLA9 2'-5' RNA ligase n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZLA9_9GAMM Length = 173 Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 47/130 (36%), Positives = 66/130 (50%), Gaps = 2/130 (1%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL 60 MS +R+F A+ P E +++ A GRP+ +LHLTLAF G + A + + Sbjct: 1 MSNRRRVFIAL-WPDEATREMLDEEAKRLG-GPGRPIPKAHLHLTLAFAGTIPATQVDCI 58 Query: 61 SLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 + G + Q F LTLD G + R+RV W+G + P L LA R A G + Sbjct: 59 AREIGMLEQEAFPLTLDRLGHFERARVSWIGPSETPAALDTLAARARDLARACGVTPEDH 118 Query: 121 PFHPHITLLR 130 PF PH+TL R Sbjct: 119 PFLPHVTLRR 128 >UniRef50_A4BU36 2'-5' RNA ligase, putative n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BU36_9GAMM Length = 197 Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 56/177 (31%), Positives = 78/177 (44%), Gaps = 12/177 (6%) Query: 2 SEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALS 61 + QRLF A+ P E + A P+ GR V +NLH+TLAFLG+V E + Sbjct: 8 GDTQRLFLAL-WPDEGVRCAVARLARRLVPD-GRLVPPENLHVTLAFLGDVPGEAMPRVR 65 Query: 62 LLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 + + F L LD G W R R+ W+ P L +L LR ++G +R Sbjct: 66 AIGANLVGATFALELDRIGCWPRPRISWIAPSHTPAVLGRLNRELRQVLRKAGFPVPSRR 125 Query: 122 FHPHITLLRDASEAVTIPPPGFN----WSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 F PH+TL R ++ P F+ + + TL S R RY L W L Sbjct: 126 FAPHMTLARRSA------PHAFHDVTPVVWPIERITLIRSHLERAGARYEILCEWPL 176 >UniRef50_C7IIN7 2'-5' RNA ligase n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IIN7_9CLOT Length = 182 Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 51/184 (27%), Positives = 85/184 (46%), Gaps = 20/184 (10%) Query: 6 RLFFAIDLPAEIRE---QIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEK-EKALS 61 R+FFAI+L I++ +I +H +G +N HLTL F+GE + ++ EK Sbjct: 2 RVFFAIELDDGIKDYLSEIQQEVKSHCI--SGNFTFKENFHLTLRFIGEQNVQQVEKLKQ 59 Query: 62 LLAGRIRQPGFTLTLDDAGQWLRSR--VVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 +L P F L LD G + + ++W G+ + L +L N + + ++G + Sbjct: 60 VLKDVAYNPDFELRLDKLGSFKKGNRSIIWTGLEKSLH-LQELYNNMENTLFQTGYQKEE 118 Query: 120 RPFHPHITLLRDASEAVTIPPPGF-------NWSYAVTEFTLYASSFARGRTRYTPLKRW 172 R ++PHITL R+ V + GF + V +L S + Y PL+R Sbjct: 119 RSYNPHITLARE----VKMENIGFIEKMEIEQLNVKVVSISLMESKRVNNKLAYVPLERA 174 Query: 173 ALTQ 176 L + Sbjct: 175 ELQK 178 >UniRef50_B3EA65 2'-5' RNA ligase n=1 Tax=Geobacter lovleyi SZ RepID=B3EA65_GEOLS Length = 184 Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 61/177 (34%), Positives = 85/177 (48%), Gaps = 14/177 (7%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF AI+LP +++Q+ H R V + LHLTLAFLGEV+ + L+ G Sbjct: 2 RLFVAIELPEAVQQQL---SLLHAELTGVRWVRPEQLHLTLAFLGEVAEVQLGQLTEALG 58 Query: 66 RIRQPGFTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 +IR FTL G + RV W+G+ +P L QLA +R+ G R F Sbjct: 59 QIRCQPFTLQFGRLGCFPDQRHPRVFWIGL-EPNPALQQLAQQVRAAVRACGITLEERLF 117 Query: 123 HPHITL--LRDAS----EAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWA 173 PHITL L++A A+ P AV F L SS + ++ L+R+A Sbjct: 118 SPHITLARLKEADPRQVAALLTQQPVLP-EVAVDAFLLVQSSLSARGAQHRVLRRFA 173 >UniRef50_Q88K67 2'-5' RNA ligase, putative n=6 Tax=Pseudomonas RepID=Q88K67_PSEPK Length = 181 Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 55/177 (31%), Positives = 78/177 (44%), Gaps = 15/177 (8%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 +RLFFA+ R + WR +G+PV A N H+TL FLG+V + A+ Sbjct: 13 KRLFFALPASDAQRRDLAQWR-RGLNLRSGKPVPAANFHVTLLFLGDVDTAQVPAICAAV 71 Query: 65 GRIRQPGFT--LTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 ++ P L LD W R+ + L +Q P L+QL L+ G + R + Sbjct: 72 DQLALPAMAPRLLLDRLQVWQRAGALVLEAQQVPPALLQLVYGLQQALLPLGLEAATREY 131 Query: 123 HPHITLLRD----ASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALT 175 PH+TL RD EA + P + FTLY S + Y PL +W L Sbjct: 132 RPHLTLSRDYRGQPPEASSAP----EFYLTARHFTLYESR----KGAYWPLAQWPLA 180 >UniRef50_C9R942 2'-5' RNA ligase n=1 Tax=Ammonifex degensii KC4 RepID=C9R942_AMMDK Length = 188 Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 55/171 (32%), Positives = 81/171 (47%), Gaps = 17/171 (9%) Query: 1 MSEPQRLFFAIDLPAEIREQIIH-WRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKA 59 M E RLF+A+ LPA +R Q++ R F P + + V +NLHLT+ FLG+ A + Sbjct: 1 MQEKWRLFWAVPLPASLRRQLVEVQRELGFSPRSVKWVEEENLHLTVRFLGDTEAGQVDP 60 Query: 60 L-SLLAGRIRQ-PGFTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANMLRSQAARSG 114 L +A R+ F+L ++ G + RV+W+G++ P L L + G Sbjct: 61 LREAVAARLTSIKAFSLEVEKLGAFPSLKHPRVIWVGVKAHP-SLFLLYQAVEEAVRGLG 119 Query: 115 CFQSNRPFHPHITLLRDASEAVTIPPPGFNWS--------YAVTEFTLYAS 157 + +PF PHITL R AV P W+ + V E LY S Sbjct: 120 FAPATQPFSPHITLGRVRERAVV--PGDHRWAERSYTFTPFLVDELVLYRS 168 >UniRef50_A9B5P6 2'-5' RNA ligase n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B5P6_HERA2 Length = 195 Score = 65.9 bits (159), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 47/136 (34%), Positives = 68/136 (50%), Gaps = 10/136 (7%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPV---AADNLHLTLAFLGEVSAE-- 55 MSE R F A+DLP I+ Q++ +A + G P+ +NLHLTL FLG ++ E Sbjct: 1 MSEQWRCFMALDLPEPIQAQLLAIQAEL--QQLGLPIRWSKPENLHLTLQFLGNLAVELL 58 Query: 56 KEKALSLLAGRIRQPGFTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAAR 112 + L +Q TL + G + + +VVW G Q P L+QL + ++ Sbjct: 59 PDLQTKLNHALTQQTAPTLNCNTWGYFPNASQPQVVWAGFEQWPNDLLQLQQAVVGCSSH 118 Query: 113 SGCFQSNRPFHPHITL 128 G RP+HPHITL Sbjct: 119 IGIIAETRPWHPHITL 134 >UniRef50_B3T3P3 Putative 2',5' RNA ligase family protein n=2 Tax=environmental samples RepID=B3T3P3_9ARCH Length = 179 Score = 65.9 bits (159), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 14/173 (8%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 R F AI++ + IH T +A +PV N+H T+ FLGEVS E +S Sbjct: 2 RTFVAIEVSDKDVLNSIHKIQTELNIKA-KPVELHNMHFTVQFLGEVSEEMIGKISDTLN 60 Query: 66 RIRQPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 I F++T G + + RV+W+G+ L +LA M+RS+ + F ++ F Sbjct: 61 SIEFSAFSITFASIGVFPKPNSPRVIWIGVTNGINELEKLAEMIRSKLSDID-FSPDKKF 119 Query: 123 HPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALT 175 PH+T+ R ++ +P +S + SF + LK+ LT Sbjct: 120 KPHVTIFRVKNKIEDLPSKLEKFS---------SCSFGKQLISEIKLKKSELT 163 >UniRef50_A1SVM8 2'-5' RNA ligase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SVM8_PSYIN Length = 174 Score = 65.5 bits (158), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 19/180 (10%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 +RLF I L + +Q+ +A A R V A NLH+TL FLG + + ++ L Sbjct: 3 KRLFLGIALDKQQTQQLSKLQANF--DSAVRLVPAANLHMTLLFLGLIDDKTQQQLEEQI 60 Query: 65 GRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHP 124 + +P F L+LD W + +++ L + L++LA + + + ++ PF P Sbjct: 61 SLMDKPKFNLSLDKLDHWAKPKILCLTGQIDDPALLKLAKNCSALSTQFKLYKDENPFTP 120 Query: 125 HITLLRDA-------SEAVTIPPPGFNWSYAVTEFTL---YASSFARGRTRYTPLKRWAL 174 HITL R A S +V I P +T TL ++ S G +Y L+ W L Sbjct: 121 HITLARKAKYLPENMSTSVDIQP------LLLTPKTLHLFHSQSTIEG-VKYQILRSWNL 173 >UniRef50_UPI000196B731 hypothetical protein CATMIT_00742 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B731 Length = 352 Score = 65.5 bits (158), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 40/132 (30%), Positives = 68/132 (51%), Gaps = 8/132 (6%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEA--GRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 R F A+ + +E+++H + E G+ DNLH+TLAF GE + + E + + Sbjct: 8 RQFIALTFNSSFKEELVHIIDS-LKEEGIKGKYYDPDNLHMTLAFFGETNRQDE--IMEI 64 Query: 64 AGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 I P T+T + G + ++ W+G+++ P L N LR+ + ++PF+ Sbjct: 65 IQSIPFPEITITTNRIGHF--KKIYWVGVKENPE-LDAYVNTLRNTLKQHDIPFDDKPFY 121 Query: 124 PHITLLRDASEA 135 PHIT+LR A E Sbjct: 122 PHITILRKAEEG 133 >UniRef50_B8I3E4 2'-5' RNA ligase n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I3E4_CLOCE Length = 181 Score = 65.5 bits (158), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 51/187 (27%), Positives = 85/187 (45%), Gaps = 27/187 (14%) Query: 6 RLFFAIDLPAEIR------EQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKA 59 R+FFAI+ +I+ +Q + T +G +N HLTL F+GE + + + Sbjct: 2 RVFFAIEFDDDIKTYLSEIQQKVRQHCT-----SGNFTLKENFHLTLRFIGEQNTDHVQN 56 Query: 60 LS-LLAGRIRQPGFTLTLDDAGQWLRSR--VVWLGMRQPPRGLIQLANMLRSQAARSGCF 116 L +L + GF L LD G + + ++WLG+ + + L QL N + ++ G Sbjct: 57 LKQVLKDAAQFQGFELILDKPGIFRKGNRGIIWLGIEKSLQ-LQQLYNNMEDLLSQKGYQ 115 Query: 117 QSNRPFHPHITLLRDA--------SEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTP 168 + R ++PHITL R+ +E + I + V +L S + Y P Sbjct: 116 KEERSYNPHITLAREVKTEDFGFLTEKIEIDK----LTMKVKSISLMESKRINDKLAYIP 171 Query: 169 LKRWALT 175 L+R LT Sbjct: 172 LERAELT 178 >UniRef50_C6P1X6 2'-5' RNA ligase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1X6_9PROT Length = 183 Score = 65.1 bits (157), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 49/169 (28%), Positives = 72/169 (42%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLFFA+ R + W+ GR + D LH TL F+G V+ + + L L A Sbjct: 11 RLFFALWPNTVERTALAAWQPPLRESCGGRAMLPDTLHTTLVFVGNVAEHRLETLRLAAQ 70 Query: 66 RIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPH 125 + GF L L +A W + +V+ + P L L L + RP+ PH Sbjct: 71 EVSGRGFGLDLTEAHYWGHNHIVYAAPQTVPVQLADLVIDLEHSLRKHRFHFEQRPYKPH 130 Query: 126 ITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 +TLLR+A + P + + +F L S RY L R+ L Sbjct: 131 VTLLRNAQWSEASLPAMRTVRWRIEDFVLVHSLSDEQGARYEVLARFPL 179 >UniRef50_Q58963 UPF0097 protein MJ1568 n=11 Tax=Methanococcales RepID=Y1568_METJA Length = 173 Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 81/181 (44%), Gaps = 23/181 (12%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF AID+P I+E+I ++ F + + V +NLH+T+ FLGEV EK K + L Sbjct: 2 RLFLAIDIPENIKEEIAKFQE-QFKMKGIKLVEKENLHITVKFLGEVDEEKLKEILNLDL 60 Query: 66 RIRQPGFTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 I QP + L G + S RV+W+G L+++ + + + G F+ R + Sbjct: 61 SI-QP-IKIKLKYIGTFPNSNYIRVIWIGAYN--NNLVEIFKEIDEKLSNLG-FKKEREY 115 Query: 123 HPHITL-----------LRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKR 171 PH+T+ L+D E G + LY S+ Y +K Sbjct: 116 VPHLTIGRVKFIDNKKKLKDRIEKYKDVDFG---EFEAKHIKLYKSTLTPNGPIYEVIKE 172 Query: 172 W 172 W Sbjct: 173 W 173 >UniRef50_Q1QSH4 2',5' RNA ligase n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QSH4_CHRSD Length = 174 Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 55/173 (31%), Positives = 77/173 (44%), Gaps = 8/173 (4%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFPP-EAGRPVAADNLHLTLAFLGEVSAEKEKA 59 M+ +RLFFA+ P + + + A P G P+ A+N+H+TLAFLG V + Sbjct: 1 MTVSRRLFFAL-WPDDTTRRALAAEAQRLAPLCGGYPLPAENMHITLAFLGNVDEARIAP 59 Query: 60 LSLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 L LA TLD G + + R+VW G + L+ L L AR G Sbjct: 60 LVALAQAWPALQGEWTLDRLGHFPKPRIVWAGSQASSPELMALDAELWQALARHGFTAPQ 119 Query: 120 RPFHPHITLLRDASEAV---TIPPPGFNWSYAVTEFTLYASSFARGRTRYTPL 169 R F PH++L+R A A +P P W + L S G +RY L Sbjct: 120 RDFTPHVSLVRQADRAAPASRLPTP-IRWRF--DRLALVESQLDNGGSRYRTL 169 >UniRef50_A7GH44 2'-5' RNA ligase n=10 Tax=Clostridium RepID=A7GH44_CLOBL Length = 178 Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 45/174 (25%), Positives = 77/174 (44%), Gaps = 5/174 (2%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEA-GRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 R+F+A+ E +E++I ++ GR +N HLTL F+GEV +K L+ + Sbjct: 5 RVFYAVTFYEEAKEKLIEYKNIVVNNSVKGRFTNKNNFHLTLEFIGEVDEKKLSLLTNIL 64 Query: 65 GRIRQPGFTLTLDDAGQWLR--SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 +++ P + G + R ++WLG+ + + LI L LR+ +G +R + Sbjct: 65 YKLQNPPKEVVTSYIGSFKRRDKEIIWLGI-EENKCLITLQRELRNLLINNGFQIEDRRY 123 Query: 123 HPHITLLRDASEAVTIPPPGFN-WSYAVTEFTLYASSFARGRTRYTPLKRWALT 175 PHIT+ R+ I F + L S + Y PL+ L Sbjct: 124 KPHITIGREIVRKGFIEKNIFQPLHIPIASIALMESKRVNNQLVYEPLEEQILV 177 >UniRef50_Q39PT9 2',5' RNA ligase n=4 Tax=Geobacter RepID=Q39PT9_GEOMG Length = 184 Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 54/165 (32%), Positives = 71/165 (43%), Gaps = 27/165 (16%) Query: 6 RLFFAIDLPAEIREQI---------IHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEK 56 RLF AIDLP E++ + + W PP D LHLTL F+GE Sbjct: 2 RLFVAIDLPDEVKRSVADICRGVPGVRW----LPP--------DQLHLTLRFIGEEDDAV 49 Query: 57 EKALSLLAGRIRQPGFTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANMLRSQAARS 113 A+ I P F L+L G + R RV+W+G+ L QL + + + Sbjct: 50 AAAIRRGLAEITSPPFPLSLQGVGCFPSPRRPRVLWVGLSG-GAPLQQLQQKVEAAMVAA 108 Query: 114 GCFQSNRPFHPHITL--LRDASEAVTIPPPGFNWSYAVTEFTLYA 156 G RPF PHITL LR+ E P N S+ FT+ A Sbjct: 109 GILAEERPFSPHITLARLREHREGDVAPFLARNASFHCEPFTVDA 153 >UniRef50_B5E8F5 2'-5' RNA ligase n=3 Tax=Geobacter RepID=B5E8F5_GEOBB Length = 184 Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 43/128 (33%), Positives = 60/128 (46%), Gaps = 7/128 (5%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF AIDLP EI+ + R VA +HLTL F+G+V + + Sbjct: 3 RLFVAIDLPEEIKASLSQLSCAV---TGARWVAPSEIHLTLRFIGDVDPQTVSKIEKALS 59 Query: 66 RIRQPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 ++ P F L + G + RV+W+G+ P LI L + S +G +RPF Sbjct: 60 AVQFPSFPLRVAGVGHFPARGYPRVLWVGLEPHPE-LIALQQRIESALQPAGVSPEDRPF 118 Query: 123 HPHITLLR 130 PHITL R Sbjct: 119 SPHITLAR 126 >UniRef50_Q9X2H4 UPF0097 protein TM_1860 n=9 Tax=Thermotogaceae RepID=Y1860_THEMA Length = 187 Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 54/168 (32%), Positives = 79/168 (47%), Gaps = 21/168 (12%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRP-VAADNLHLTLAFLGEVSAEKEKALSL-L 63 R F AID+ E+++Q G V+ +N+HLTL FLGEV +K ++ L Sbjct: 2 RTFIAIDVNEEVKKQASEIIEKLMKRGFGATWVSEENMHLTLFFLGEVDEQKISEIAEHL 61 Query: 64 AGRIRQ-PGFTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 R+R P F+ T+ G + R RV WLG+ R L++L LR++ + G F Sbjct: 62 CRRVRGFPSFSFTVKGFGYFKRKMSPRVFWLGVENTDR-LMKLYEELRNELSHHG-FSFE 119 Query: 120 RPFHPHITLLR---------DASEAVTIPPPGFNWSYAVTEFTLYASS 158 F PHIT+ R E + PP AV F +Y+S+ Sbjct: 120 EKFVPHITIGRVKYYPDKWEKLIEDIDFPPI----EVAVDRFKIYSST 163 >UniRef50_Q0BV79 2'-5' RNA ligase n=2 Tax=Acetobacteraceae RepID=Q0BV79_GRABC Length = 212 Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 54/187 (28%), Positives = 86/187 (45%), Gaps = 27/187 (14%) Query: 4 PQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 P RLF +DLP +++++ + A P R ++ +N HLTL F+G+V + L L Sbjct: 36 PMRLFVGLDLPWILKDEL-YGIAYGLP--GARWISPENYHLTLRFIGDVPGHRADELDLA 92 Query: 64 AGRIRQPGFTLTLDDAGQWLRS--RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 +R GF+L L G + R+ +++G+ + P+ L L N + + R G R Sbjct: 93 LSTLRARGFSLVLTGIGIFERAGRSTLYVGVEKNPQ-LDHLQNKIETGLQRVGLPPERRR 151 Query: 122 FHPHITLLRDASEAV--------------TIPPPGFNWSYAVTEFTLYASSFARGRTRYT 167 F PH+TL R A T P P V FTL++S + ++ YT Sbjct: 152 FMPHVTLARLDGTADNRLASYVQSHNLFRTDPIP-------VEHFTLFSSQLGKEQSVYT 204 Query: 168 PLKRWAL 174 +AL Sbjct: 205 VEADYAL 211 >UniRef50_D0CTG2 2'-5' RNA ligase n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CTG2_9RHOB Length = 181 Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 9/172 (5%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 R F I + EI + + + GRPV +NLHLTL FL E + + L + Sbjct: 11 RCFVGIPVSGEIADLCVELGRS---ASDGRPVPRENLHLTLQFLDEQPHDSLEELHMQLD 67 Query: 66 RIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPH 125 +R P F++ + GQ+ ++ V M +P L L + + + RSG +R F PH Sbjct: 68 ALRHPVFSIRVSGLGQFGQTLHV---MVEPSSILQSLHDKVLACVRRSGIRVPHRRFRPH 124 Query: 126 ITLLRDASEAVT---IPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 IT+ R + + + P + + V +F L++S+ RY L + L Sbjct: 125 ITVARGLKKCPSNDFLKQPITDCTMQVAQFALFSSTLHSSGARYETLADYQL 176 >UniRef50_A3VLU9 2'-5' RNA ligase n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VLU9_9RHOB Length = 181 Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 58/182 (31%), Positives = 76/182 (41%), Gaps = 15/182 (8%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 R F A+DLP IR + +A GR V DNLHLTLAFLGE+ +K + L+ Sbjct: 2 RAFVALDLPEAIRRPLTRLQAGL---SVGRLVDEDNLHLTLAFLGEIDPQKAQDLAARLA 58 Query: 66 RIRQPGFTLTLDDAGQWLRSRVVWLGMRQPP-RGLIQLANMLRSQAARSGCFQSNRPFHP 124 + LTL + L M P + L+ L + +R A +G R F P Sbjct: 59 DLPDAPIELTLTGIDIMGGKKPNLLVMDAAPTQALVTLQDRVRRIAMDAGIEMERRRFRP 118 Query: 125 HITLLRDASEAVTIPPPG------FNWSYAV-TEF----TLYASSFARGRTRYTPLKRWA 173 +TL R T G N Y++ TE TLY S Y PL + Sbjct: 119 QVTLARFGKVMTTKDERGLAAFLSLNAPYSLPTELADTVTLYRSHLTGDSADYEPLAEFL 178 Query: 174 LT 175 LT Sbjct: 179 LT 180 >UniRef50_Q5SHB1 2'-5' RNA ligase n=7 Tax=Thermaceae RepID=Q5SHB1_THET8 Length = 198 Score = 62.0 bits (149), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 55/180 (30%), Positives = 80/180 (44%), Gaps = 13/180 (7%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEK---ALSL 62 RLF+A+ LP E+R ++ + P +PV LHLTL FLGE E+ AL Sbjct: 2 RLFYAVFLPEEVRAALVEAQTKVRPFRGWKPVPPHQLHLTLLFLGERPEEELPDYLALGH 61 Query: 63 LAGRIRQPGFTLTLDDAGQWLRSRV--VWLGMRQPPRGLIQLANMLRSQAARSGCFQS-- 118 R+ P F L G + VW + G ++LA LR+ ++ Sbjct: 62 RLARLEAP-FRARLRGTGYFPNEGTPRVWFAKAE-AEGFLRLAEGLRAGVEELLGEEAVR 119 Query: 119 ----NRPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 ++PF PHITL R + A +PP F + V F L S YT L++++L Sbjct: 120 IPGWDKPFKPHITLARRKAPAPRVPPVLFGLEWPVEGFALVRSELKPKGPVYTVLEKFSL 179 >UniRef50_B5JNL9 2'-5' RNA ligase n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JNL9_9BACT Length = 183 Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 80/183 (43%), Gaps = 20/183 (10%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVA---ADNLHLTLAFLGEVSAEKEKALSL 62 R F A+DLP E R ++ R++ G+ A + +H+TL F+GE+ E+ + L Sbjct: 5 RYFIAVDLPEEHRRELTGLRSS------GKGFAWTRLERMHVTLRFIGELEGEQVERLVE 58 Query: 63 LAGRIRQPGFTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 + F L L+ AG + R RV+W+G+ L QL + + G Sbjct: 59 GLAVVEVERFVLPLEGAGIFPARGRPRVLWVGVGSGHPRLFQLRQRIDDLLLKLGIEADV 118 Query: 120 RPFHPHITLLR--------DASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKR 171 R FHPH+T+ R A+E V + V F LYAS RY + Sbjct: 119 RSFHPHVTIARIRDGSSVNSATEWVKRRREFVGAPFRVEGFVLYASRLYSNGARYERVAE 178 Query: 172 WAL 174 +AL Sbjct: 179 YAL 181 >UniRef50_B0TTJ1 2'-5' RNA ligase n=2 Tax=Shewanella RepID=B0TTJ1_SHEHH Length = 177 Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 49/176 (27%), Positives = 76/176 (43%), Gaps = 9/176 (5%) Query: 2 SEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALS 61 S+ +R+F L + + II + P + R V + NLH+TLAFLG + + A+ Sbjct: 7 SQTKRVFLGFSLDSLQTQSIIAIQGQL--PNSVRLVPSANLHMTLAFLGAATPAQINAII 64 Query: 62 LLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 ++ +P F++ LD W + +++ L GL Q A + AA G S Sbjct: 65 DSVDKMSRPKFSVMLDSLSHWEKPKILCLRGDATDPGLRQFAQDAQCIAAELGLHCSEYH 124 Query: 122 FHPHITLLRDAS---EAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 ++PHITL R V PP A ++ L+ S Y L W L Sbjct: 125 YNPHITLARKTKAEVRGVDYPP----LILAPSQLQLFESYSGLNGVEYPTLHCWQL 176 >UniRef50_B5YF63 2'-5' RNA ligase n=2 Tax=Dictyoglomus RepID=B5YF63_DICT6 Length = 194 Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 52/182 (28%), Positives = 88/182 (48%), Gaps = 11/182 (6%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRP--VAADNLHLTLAFLGEVSA---EKEKA 59 +RLF AI+L I++ I+ ++ G V +N HLT+ FLGE + K+ Sbjct: 13 RRLFIAIELEDSIKDHILSFQKELKNSVLGDVKWVERENFHLTIKFLGETPENLIDDIKS 72 Query: 60 LSLLAGRIRQPGFTLTLDDAGQW--LRS-RVVWLGMRQPPRGLIQLANMLRSQAARSGCF 116 + +P F ++L+ G + L+S RV+W+G+ + GL ++ + + + + G Sbjct: 73 ILDETSYYFEP-FYISLEGFGAFPSLKSPRVLWIGIEEGLDGLEKVFDFIEKRLVKKGFR 131 Query: 117 QSNRPFHPHITLLRDASEAVTI-PPPGFNWSYA-VTEFTLYASSFARGRTRYTPLKRWAL 174 + +RPF PH+TL R V I F+ V+ TL+ S YTP+ R L Sbjct: 132 KEDRPFSPHLTLGRVKDRDVRILKDLLFDKEVVLVSSITLFESKLTPEGPIYTPIYRVNL 191 Query: 175 TQ 176 + Sbjct: 192 GK 193 >UniRef50_Q1Z4G8 Putative uncharacterized protein n=2 Tax=Photobacterium profundum RepID=Q1Z4G8_PHOPR Length = 211 Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 29/199 (14%) Query: 5 QRLFFAIDLPAEIRE----------QIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSA 54 ++LFFA+ LP E Q+ + T G+P+ +NLH+TL FLG V Sbjct: 6 EKLFFALGLPPITDEKNDCNLKSYQQLCQLKNTVAAEMQGKPIFNNNLHITLVFLGAVKQ 65 Query: 55 EKEKALSLLAGRIRQP-GFTLTLDDAGQWLRSRVVWLGM-----------RQPPRGLIQL 102 ++++ L ++ P F+++ + W RS+V+WL +QP L L Sbjct: 66 QQKQRLITNVNQLIAPQAFSVSCSELHYWPRSQVIWLDCHAYHPVHQQRHQQPSTSLQTL 125 Query: 103 ANMLRSQAAR-SGCFQSNRP--FHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSF 159 +L+ A + SN+ + PHITL + + + P + F LY S Sbjct: 126 VCLLQQAAIHVTSDAVSNQASGYIPHITLCKKVTSRPHLSPLPQQLDFHFQHFGLYISET 185 Query: 160 AR----GRTRYTPLKRWAL 174 + +Y L++W+L Sbjct: 186 IKTAHGSGVQYRCLQQWSL 204 >UniRef50_Q0Q0I5 LigT n=1 Tax=Heliophilum fasciatum RepID=Q0Q0I5_9FIRM Length = 206 Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 54/180 (30%), Positives = 78/180 (43%), Gaps = 14/180 (7%) Query: 6 RLFFAIDLPAEIREQI--IHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL--S 61 RLFFAI LP + + + + WR F + G DN H+T+AFLGE + L Sbjct: 2 RLFFAITLPETVTKALTDLQWRV-RFQLKRGNYTQPDNFHITVAFLGEQPDDVPDLLIPP 60 Query: 62 LLAGRIRQPGFTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQS 118 L A F+LTLD G++ R +W+G++ L L + G Sbjct: 61 LNALAKYTSPFSLTLDGMGRFGYGNPFRALWMGVQGERTRLNYLQETVSMICEVLGYPTE 120 Query: 119 NRPFHPHITLLRDA------SEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRW 172 R + PH+TL+R A E +T P ++ V F L S GR Y P+ + Sbjct: 121 ERHYRPHVTLVRHAVFPPNTEEVMTWTIPRNKATFKVNHFVLMESVTQHGRVVYRPVHTF 180 >UniRef50_A9A3X7 2'-5' RNA ligase n=1 Tax=Nitrosopumilus maritimus SCM1 RepID=A9A3X7_NITMS Length = 180 Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 43/132 (32%), Positives = 65/132 (49%), Gaps = 12/132 (9%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPE---AGRPVAADNLHLTLAFLGEVSAEKEKALSL 62 R F AI EI E I F + +P+ +D LH TL FLGE+S E+ + + Sbjct: 2 RTFVAI----EISENDIKKSIKDFQNKLQINAKPINSDQLHFTLQFLGEISEEQVQKVIE 57 Query: 63 LAGRIRQPGFTLTLDDAGQWLR---SRVVWLGMRQP-PRGLIQLANMLRSQAARSGCFQS 118 I+ FT+ L G + + RV+W+G + + LI+LA + + G S Sbjct: 58 SLQTIKFSEFTINLKGIGAFPKPKFPRVIWIGTDEEGGKNLIELAKKVENVLKPLGLV-S 116 Query: 119 NRPFHPHITLLR 130 ++PF PHIT+ R Sbjct: 117 DKPFKPHITIFR 128 >UniRef50_Q0ABC1 2'-5' RNA ligase n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0ABC1_ALHEH Length = 182 Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 54/149 (36%), Positives = 67/149 (44%), Gaps = 14/149 (9%) Query: 33 AGRPVAADNLHLTLAFLGEVSAEKEKALSLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGM 92 GRPV +LHLTLAF G V+AE+ L A +R P FTL L G + R+RV + Sbjct: 36 GGRPVPRGHLHLTLAFAGLVTAEQVACLQRAAAGVRAPAFTLRLQTLGGFARARVAHVAP 95 Query: 93 RQP--PRGLIQLANMLRSQAARSGCFQSNRPFHPHITL----LRDASEAVTIPPPGFNWS 146 + P L +LA L G R F PH+TL +V++P WS Sbjct: 96 DEQDLPPALPELAGQLNRALVACGVPAERRGFRPHVTLRRDARPPRPRSVSLP----EWS 151 Query: 147 YAVTEFTLYASSFARGRTR-YTPLKRWAL 174 V F L S RGR Y L W L Sbjct: 152 --VDRFVLVESG-DRGRPGPYRVLAEWLL 177 >UniRef50_C8WVE5 2'-5' RNA ligase n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WVE5_ALIAD Length = 197 Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 60/188 (31%), Positives = 90/188 (47%), Gaps = 23/188 (12%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVA-----ADNLHLTLAFLGEVS-AEKEK 58 +RLFF ++LP +++I + + G+ VA D HLT+ FLG V A+ E+ Sbjct: 3 RRLFFGLELPDAWKDEIA--KRCESIRQQGQVVARNWSRKDLYHLTVLFLGAVDPADLER 60 Query: 59 ALSLLAGRIR---QPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRS-----QA 110 A LAG Q F LT G++ +SRV WLG+ + L +L + R A Sbjct: 61 AF--LAGERAAGAQAPFRLTTGSFGRFHQSRVFWLGLDEAESDLAELTALHRCVRIAVNA 118 Query: 111 ARSGCFQSNRPFHPHITL---LRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYT 167 A +RP+ PHITL LR SE + P S+ TE L+ S+ G+ Y Sbjct: 119 ALPSVQIEDRPYRPHITLARELRQFSEPELVAPRPL--SHVFTELCLFESTRNGGQLAYP 176 Query: 168 PLKRWALT 175 ++R+ + Sbjct: 177 VIRRFPFS 184 >UniRef50_A6FTX1 2'-5' RNA ligase n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FTX1_9RHOB Length = 186 Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 45/127 (35%), Positives = 60/127 (47%), Gaps = 6/127 (4%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF AI LP +R + ++ GR V DNLHLTLAFL E +A++ L G Sbjct: 2 RLFVAIGLPDVVRAALSRLQSDL---RVGRLVEPDNLHLTLAFLDEQDLPTAEAVNELLG 58 Query: 66 RIRQPGFTLTLD--DAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 IR P F L + D R R+V+ + P L+ L +R +G F Sbjct: 59 DIRAPAFDLRIAGLDVFDRARPRLVFAASDR-PEALVSLRKKVRVAVRDAGVDLPRERFR 117 Query: 124 PHITLLR 130 PH+TL R Sbjct: 118 PHVTLAR 124 >UniRef50_D1CCP6 2'-5' RNA ligase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CCP6_THET1 Length = 194 Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 56/191 (29%), Positives = 80/191 (41%), Gaps = 15/191 (7%) Query: 1 MSEPQ-RLFFAIDLPAEIREQIIHWRATHFPPEAGRP-VAADNLHLTLAFLGEVSAEKEK 58 MS+ + RLF AID+P IR + + G V N+HLTL FLG+VS + Sbjct: 1 MSDDKARLFLAIDIPKSIRSILYDLGRSGLAGSTGLKWVEESNIHLTLKFLGDVSRSQID 60 Query: 59 ALSLLAGRIRQP---GFTL-TLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSG 114 A+ + I P G + L G R RV+W G+ L L + + AR G Sbjct: 61 AIQDVLEDITCPDSIGLEIRGLGIFGNLRRPRVLWAGVSGDIEALRLLHQEVEDKCARLG 120 Query: 115 CFQSNRPFHPHITLLRDASEAVTIPP----PGFNWSYAVTEF-----TLYASSFARGRTR 165 + + PH+TL R P G N ++ F LY S+ Sbjct: 121 FDRDVMEYRPHVTLARFKESFADTPSLRRLLGANNDVSLGSFIAESMVLYQSTLLPSGPV 180 Query: 166 YTPLKRWALTQ 176 YTP+K + L + Sbjct: 181 YTPVKTFNLIE 191 >UniRef50_C9PFM9 Putative uncharacterized protein n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PFM9_VIBFU Length = 179 Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 48/135 (35%), Positives = 68/135 (50%), Gaps = 8/135 (5%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWR---ATHFPPEAGRPVAADNLHLTLAFLGEVSAEKE 57 M+ R FFA+ AE + Q+ R TH G +DN HLTL F+GEV++E Sbjct: 1 MNSDLRCFFALTFAAEEKAQLRRERERLKTH--ATKGTFTHSDNFHLTLEFIGEVASEHL 58 Query: 58 KALSLLAGRIRQPGFTLTLDDAGQW-LRSR-VVWLGMRQPPRGLIQLANMLRSQAARSGC 115 L L + TL +D G + ++ R ++WLG+ Q L+ L LR + A + Sbjct: 59 PTLKGLLHELECAPMTLHVDHLGHFHIKGRQLIWLGVTQ-QHDLMALQAALRMKLADTPF 117 Query: 116 FQSNRPFHPHITLLR 130 NRP+ PHITL R Sbjct: 118 PPENRPYVPHITLGR 132 >UniRef50_A1HSF5 2'-5' RNA ligase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSF5_9FIRM Length = 182 Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 52/183 (28%), Positives = 81/183 (44%), Gaps = 16/183 (8%) Query: 6 RLFFAIDLPAEIREQIIHWRA-THFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF I+ P +I +++ + +GR A N+HLTL FLGEV+ +K + Sbjct: 2 RLFIGIEFPEDILDKLGQTQDYLRRYVSSGRFTAKHNMHLTLQFLGEVAEDKVGDICRCL 61 Query: 65 GRIRQPGFTL-----TLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 ++ + L L GQ RVVW+G+ L +L + G N Sbjct: 62 QQVAKEHSPLRLALGALGCFGQNNPYRVVWVGLGGDLTALNRLQRAIVLGMKDLGFIPEN 121 Query: 120 RPFHPHITLLRDA--------SEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKR 171 RP+ PHITL RD +A+ + G S++V F+L +S+ + Y L Sbjct: 122 RPYKPHITLARDVWFTDAQAYQQALRLTAGG--TSFSVKSFSLISSAVEEKKRVYRSLAT 179 Query: 172 WAL 174 + L Sbjct: 180 FEL 182 >UniRef50_B9L2B1 2'-5' RNA ligase n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L2B1_THERP Length = 191 Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 61/198 (30%), Positives = 85/198 (42%), Gaps = 32/198 (16%) Query: 1 MSEPQRLFFAIDLPAEIREQ----IIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEK 56 M E RLF AI +P ++R++ I H +A + + V + HLT+ F G V+ + Sbjct: 1 MREEWRLFAAIPVPDDVRQRVAAAIAHLQARGY---RAKWVDPEATHLTVKFFGSVATDS 57 Query: 57 EKALSLLAGRIRQPG---FTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANMLRSQA 110 L+ A R G F L + AG + LR RV+WLG+ L QL + A Sbjct: 58 LPDLTR-ALRKSVTGLARFELQVHGAGAFPHPLRPRVLWLGIDGETAPLAQLVEQVERSA 116 Query: 111 ARSGCFQSNRPFHPHITLLRDASEAVT--------------IPPPGFNWSYAVTEFTLYA 156 RPFHPH+TL R E + +PP F V TLY Sbjct: 117 GSFAEKTDERPFHPHLTLARVRPEDLATLRALPQELERLARLPPLPFT----VDRLTLYR 172 Query: 157 SSFARGRTRYTPLKRWAL 174 S R RYT ++ + L Sbjct: 173 SELFRSGPRYTIIEEFLL 190 >UniRef50_B6IVY2 2'-5' RNA ligase, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6IVY2_RHOCS Length = 204 Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 53/180 (29%), Positives = 77/180 (42%), Gaps = 15/180 (8%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF + LP R+++ FP R V +N HLTL F+GEV + + Sbjct: 3 RLFVGLPLPEASRDRLARL-GPGFP--GVRRVPPENFHLTLRFIGEVDEGTAQDIDAALD 59 Query: 66 RIRQPGFTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 + P F L L+ GQ+ R R +W G+ + L L + + S R+G R F Sbjct: 60 LVTAPPFPLMLEGLGQFGRGGRPRALWAGVAR-SEALAHLRDKVESAVVRAGQPAEERRF 118 Query: 123 HPHITLLRDASEAVT------IPPPGF--NWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 PH+TL R +EA I G V F L+ S +G + Y L+ + L Sbjct: 119 MPHVTLARLTAEAPAHRIGRFIAENGLFREGPLPVDRFVLFESVLGKGGSIYHELRSYPL 178 >UniRef50_A7GTX3 2'-5' RNA ligase n=73 Tax=Bacillus cereus group RepID=A7GTX3_BACCN Length = 184 Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 53/188 (28%), Positives = 84/188 (44%), Gaps = 31/188 (16%) Query: 8 FFAIDLPAEIREQIIHWRATHFPPEAGRP-VAADNLHLTLAFLGEVSAEK----EKALSL 62 F AI LP +I+E++ +++ R V ++ H+TLAFLG + E+ ++ L L Sbjct: 6 FIAITLPHDIKERLANYKEEMNDTLPFRSWVHKEDYHITLAFLGSATQEQLQEIKEGLHL 65 Query: 63 LAGRIRQPGFTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 L + F+L L + R R+ W G+ + + L+ L + S RSG Sbjct: 66 LKN---EQEFSLLLQGFSTFGPPERPRIFWAGLEES-KALLHLQKKVHSICERSGFSLET 121 Query: 120 RPFHPHITLLR-----------DASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTP 168 RPFHPHIT+ R D E + S+ V TLY S+ + +Y P Sbjct: 122 RPFHPHITIARKWIGEAMFHIEDIKELKPV-------SFPVDTVTLYRSNM-KDTPKYHP 173 Query: 169 LKRWALTQ 176 + L + Sbjct: 174 VTEIKLQK 181 >UniRef50_C8SB57 2'-5' RNA ligase n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8SB57_FERPL Length = 179 Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 78/181 (43%), Gaps = 13/181 (7%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF A+DL E+RE+I T + V +NLH+TL FLGEV E+ A+ Sbjct: 2 RLFIAVDLSEELREKIAPILKTISELNGVKAVERENLHITLKFLGEVREERLPAIVEALK 61 Query: 66 RIRQPGFTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 ++ F + L G + +RV W+G+++ L +LA + S + G F Sbjct: 62 KVEFEPFKIYLKGFGFFPNDRYARVAWIGVKEGEEELKKLAESINSALKKVGF--KPESF 119 Query: 123 HPHITLLRDAS-------EAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALT 175 H+T+ R E + F W V +F L S+ Y L+ + + Sbjct: 120 TAHVTIARVKKPEGRRIVEILRDLEDDFGW-MEVKDFRLKKSTLTSKGPIYEDLEVYGVV 178 Query: 176 Q 176 + Sbjct: 179 K 179 >UniRef50_B4D614 2'-5' RNA ligase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D614_9BACT Length = 179 Score = 58.9 bits (141), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 52/168 (30%), Positives = 78/168 (46%), Gaps = 11/168 (6%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 +RLF ++LP R +R + R + + LHLT++F+G+V AE E+ L Sbjct: 3 KRLFVGLELPEGSRHL---FRKLDPQIKGLRWLPPEQLHLTMSFIGDVDAEHEEQLRGNL 59 Query: 65 GRIRQPGFTLTLDDAGQWLRSR--VVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 ++R F L + G + R VVW G+ + L L ++ +G +PF Sbjct: 60 AQVRVSPFFLPITGVGAFGGERPSVVWAGVGKGHPHLFALHQHIQDAVLHAGLDPDLKPF 119 Query: 123 HPHITL--LRDASEAVTIPPPGFNWSYAVTEFTLY-ASSFARGRTRYT 167 HPHITL R S A P F Y +EF L+ +SF +R T Sbjct: 120 HPHITLGRARGVSRAALKP---FLRDYQESEFDLWKVTSFTLFSSRLT 164 >UniRef50_C3X1K9 2'-5' RNA ligase n=1 Tax=Oxalobacter formigenes HOxBLS RepID=C3X1K9_OXAFO Length = 193 Score = 58.9 bits (141), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 34/100 (34%), Positives = 46/100 (46%) Query: 33 AGRPVAADNLHLTLAFLGEVSAEKEKALSLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGM 92 AGR +N HLTL FLG L R+ F L+LD G + + R+ W+G Sbjct: 42 AGRKTPPENFHLTLFFLGNQPESILFPLKNFMDRVTFDPFVLSLDKTGYFSKIRLSWIGP 101 Query: 93 RQPPRGLIQLANMLRSQAARSGCFQSNRPFHPHITLLRDA 132 + P GL+QL N R + F PH+TL R + Sbjct: 102 TEIPPGLVQLHNTTRQFLVPAYLEDKRESFRPHVTLARKS 141 >UniRef50_Q1IWF3 2',5' RNA ligase n=2 Tax=Deinococcus RepID=Q1IWF3_DEIGD Length = 220 Score = 58.5 bits (140), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 54/175 (30%), Positives = 72/175 (41%), Gaps = 37/175 (21%) Query: 6 RLFFAIDLPAEI--------REQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKE 57 RLF+A+ +P E+ R+ +WR PV D LHLTLA+L V K Sbjct: 33 RLFYALKVPQEVAAPLAEAQRQLRGNWR----------PVRPDQLHLTLAYLPAVPPHKV 82 Query: 58 KALSLLAGRIRQPGFTLTLDDAGQWLRSRV-----------VWLGMRQPPRGLIQLANML 106 L L G LT D A LR R VW ++ GL +LAN L Sbjct: 83 NDLKRL-------GTALTQDLAPMLLRLRGTGYFPNEGSPRVWF-VKAEAEGLSELANQL 134 Query: 107 RSQAARSGCFQSNRPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFAR 161 R+ G + PF H+TL R A +PP F+ + V L S+ + Sbjct: 135 RAGIHALGLETEDLPFKAHVTLARKKGPAPRVPPLTFDLGWQVGHVALIRSTLRK 189 >UniRef50_UPI00016981C7 2'''',5'''' RNA ligase n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI00016981C7 Length = 168 Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 8/140 (5%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 R FFA+ E+R QI GR + +LHLTL FLG++ A++ + + +A Sbjct: 5 RAFFALWPDLEVRRQIARV-GRSLNGCGGRMLQPQDLHLTLCFLGDLDAQRRRCVETVAD 63 Query: 66 RIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPH 125 L +D Q+ R+R++W+G + P LI L + L S G N HP Sbjct: 64 SFSAAPVVLQIDRIDQFPRARILWVGPLESPPSLITLHDRLSSALQSCGFAPGNPRLHP- 122 Query: 126 ITLLRDASEAVTIPPPGFNW 145 AS+ ++ P G W Sbjct: 123 ------ASDPLSQSPTGRAW 136 >UniRef50_A6EV98 2',5' RNA ligase n=1 Tax=Marinobacter algicola DG893 RepID=A6EV98_9ALTE Length = 190 Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 7/131 (5%) Query: 3 EPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSL 62 E RLFF +++P ++++++ + P R D LHLTL FLG V+ ++ + Sbjct: 5 ETHRLFFGLEIPDLVKQRLV---SIQQPVAGARWQRPDQLHLTLVFLGSVARQRLPDVCD 61 Query: 63 LAGRIRQPGFTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 A + F LT+ G + R + +W G+ QP L +L +L + G Q Sbjct: 62 AARNLPVEQFDLTVCGLGCFGRPDFPKNLWAGV-QPADTLAELHEVLNQRLCMPGFEQEK 120 Query: 120 RPFHPHITLLR 130 RPF PHITL R Sbjct: 121 RPFCPHITLSR 131 >UniRef50_Q2CG27 2'-5' RNA ligase (Fragment) n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CG27_9RHOB Length = 204 Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 63/183 (34%), Positives = 81/183 (44%), Gaps = 18/183 (9%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEK--EKALSLL 63 R F A+DLPAE + H + P +GRPVA +NLH+TLAFLGE AE E A Sbjct: 2 RAFVALDLPAEAVAILGHLQ-ERMP--SGRPVAPENLHMTLAFLGENVAEDVLEAAHDQF 58 Query: 64 AGRIRQPGFTLTLDDAGQW-LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 A IR P + + G R+ V + + L L + S A R+G R F Sbjct: 59 AA-IRLPAPEIEVTGLGTLGARTPAVLVAEARRTAPLEALQGAVASAARRAGLVLERRRF 117 Query: 123 HPHITLLRDASEA---------VTIPPPG-FNWS-YAVTEFTLYASSFARGRTRYTPLKR 171 PHITL R S A + + G F + F LYAS+ Y L R Sbjct: 118 RPHITLARFRSTADAAALERLRLFLQSEGRFRLDPFIARSFALYASTLTHEGPVYEELAR 177 Query: 172 WAL 174 + L Sbjct: 178 YPL 180 >UniRef50_A4XK57 2'-5' RNA ligase n=2 Tax=Clostridia RepID=A4XK57_CALS8 Length = 183 Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 46/155 (29%), Positives = 69/155 (44%), Gaps = 10/155 (6%) Query: 6 RLFFAIDLPAEIREQIIHWRA-THFPPEAGRPVAADNLHLTLAFLGEVSAEK-EKALSLL 63 R F ID P ++ QI+ ++ + GR DN HLTL FLGE+ EK EK L Sbjct: 2 RTFIGIDFPKSLKVQIVEVQSFLKSISKKGRWKYIDNFHLTLKFLGEIEYEKVEKIKQAL 61 Query: 64 AGRIRQPG-FTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 ++ F+L + G + RVV+L L L +++ A G + Sbjct: 62 EKNLKDFSRFSLKIYSCGYFKGHGNLRVVYLKPDGNLEKLNNLFSLVEDAMAEVGFQREK 121 Query: 120 RPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTL 154 R + PHIT+ +D V + P N+ V F+ Sbjct: 122 REYTPHITIAQD----VVLNEPFENFQKYVENFSF 152 >UniRef50_A8MDT9 2'-5' RNA ligase n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MDT9_CALMQ Length = 181 Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 5/129 (3%) Query: 6 RLFFAIDLPAEIREQIIHWR-ATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF A+DL E+R ++I +R A +PV +NLH+TL FLGEV + Sbjct: 3 RLFVAVDLSDEVRGKVIAFRDAVSSSGADVKPVEDENLHITLRFLGEVRDNLLPEIMRNL 62 Query: 65 GRIRQPGFTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 + F + + G + + RV+W+G+ + L L + + R G R Sbjct: 63 NSLSFSSFRMHVKGTGAFPSASSPRVIWVGVEEGGDQLKALHDTVEELVGRYGV-SDERE 121 Query: 122 FHPHITLLR 130 F PHIT+ R Sbjct: 122 FTPHITVAR 130 >UniRef50_Q47TD6 2',5' RNA ligase n=1 Tax=Thermobifida fusca YX RepID=Q47TD6_THEFY Length = 182 Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 46/132 (34%), Positives = 67/132 (50%), Gaps = 7/132 (5%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAG-RPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF A+ PA + + A+ P G R VA + H+TL FLG+V ++ ++ Sbjct: 2 RLFTAVTPPAAALDALDAAVASARPTARGLRWVAREQWHMTLVFLGDVPDDQVDTVAGEL 61 Query: 65 GRI--RQPGFTLTLDDAG----QWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQS 118 GR+ R P +L+L +G Q +RSRV+W G+ L LA LR A G Sbjct: 62 GRVAARHPAMSLSLRGSGTFPPQPVRSRVLWAGVDGDTAALTALATDLREAAVALGIPVE 121 Query: 119 NRPFHPHITLLR 130 NR + PH+T+ R Sbjct: 122 NRRYVPHVTVAR 133 >UniRef50_Q72W43 2'-5' RNA ligase n=2 Tax=Leptospira interrogans RepID=Q72W43_LEPIC Length = 182 Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 46/167 (27%), Positives = 77/167 (46%), Gaps = 13/167 (7%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 R F I +P EI+EQ+ + + R V +N H+TL FLGE S+E LS Sbjct: 2 RTFLGISIPEEIKEQL---TSICYGLSDIRWVPKENFHITLVFLGEQSSECLDILSDFCS 58 Query: 66 RIRQPGFTLTLDDAGQWLRSR--VVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 I F L+L G + + + + +P L QL L S + G + + Sbjct: 59 EISFTEFDLSLKSVGTFGKQKSPSILFAAVKPSIELSQLHKTLDSGIRKLGFSIDRQNYQ 118 Query: 124 PHITL--LRDASEAVTIP-----PPGFNWSYAVTEFTLYAS-SFARG 162 PH+T+ ++++E I + ++ V+EF +Y+S +F+ G Sbjct: 119 PHLTIGRFKNSNETRVIMYLEEFANFVSSNFKVSEFHIYSSKTFSNG 165 >UniRef50_A1U2M3 2'-5' RNA ligase n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1U2M3_MARAV Length = 178 Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 52/179 (29%), Positives = 82/179 (45%), Gaps = 13/179 (7%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLFF +++P I+ ++ + + R + LHLTLAFLGEV AE+ A Sbjct: 3 RLFFGLEIPESIKTSLLKVKTD---IKGARWQSKTQLHLTLAFLGEVEAEQVIQARDNAR 59 Query: 66 RIRQPGFTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 ++ F L G + + +++W G+ P L L L + G N F Sbjct: 60 KVTHTPFKLEAAGLGCFGKEESPKILWAGV-SPEAELRGLQRTLAQRLINDGFTLQNPSF 118 Query: 123 HPHITLLRDASEAVTIPPPGFNW------SYAVTEFTLYASSFARGRTRYTPLKRWALT 175 PHITL R + A ++ ++ S+ V F L+ SS + + YT L+R+ LT Sbjct: 119 KPHITLSRFRAGAGSVAGLIEHYQRTRFGSWPVQGFALFESSPGQSGSVYTVLERYPLT 177 >UniRef50_C7HZ61 2'-5' RNA ligase n=1 Tax=Thiomonas intermedia K12 RepID=C7HZ61_THIIN Length = 186 Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 48/141 (34%), Positives = 63/141 (44%), Gaps = 11/141 (7%) Query: 41 NLHLTLAFLGEVSAEKEKALSLLAGRIRQ--PGFTLTLDDAGQWLRSRVVWLGMRQPPRG 98 LHLT+ F+ V A++ L + R+ + F LTLD A W + L QPP Sbjct: 52 KLHLTVLFMDRVPADQVTTLLEVGERVARNWADFALTLDRAAVWHHGGIAHLAPSQPPAE 111 Query: 99 LIQLANMLRSQAARSGCFQSNRPFHPHITLLRDASEAVTIPP---PGFNWSYAVTEFTLY 155 L+ L L Q + G R F PH+TL R A T PP P +W+ V F L Sbjct: 112 LLWLRAALAEQVGQRGLPFDARAFAPHVTLARRAQ--ATQPPIAFPPLHWT--VRGFALV 167 Query: 156 ASSFARGRTRYTPLKRWALTQ 176 S G RY + RW L + Sbjct: 168 HSVLGTG--RYDVIGRWPLNR 186 >UniRef50_A3DNW5 2'-5' RNA ligase n=1 Tax=Staphylothermus marinus F1 RepID=A3DNW5_STAMF Length = 193 Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 51/179 (28%), Positives = 77/179 (43%), Gaps = 14/179 (7%) Query: 3 EPQRLFFAID-LPAEIREQIIHWRATHFPPEAG-RPVAADNLHLTLAFLGEVSAEKEKAL 60 E R+F AID L + +Q+ R +A +PVA +N+H+TL F+GE ++ Sbjct: 7 ENLRVFVAIDILEPNVLDQLSKIRDLLLESKADLKPVATENMHITLRFIGETPLHLVNSI 66 Query: 61 SLLAGRIRQPGFTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQ 117 G+I F + + G + R RV+W G+ Q L +L +++ + G Sbjct: 67 CNDLGKIEFEPFKIRIKGVGVFPNIARPRVIWAGVSQGVENLSKLHDIVEKILRKHGVPP 126 Query: 118 SNRPFHPHITLLRDASEAVTIPPPGFNWSYAVTEF-TLYASSFARGRTRYTPLKRWALT 175 F PHITL R S G N S V ++ + F LKR LT Sbjct: 127 QREKFIPHITLARVKS--------GRNISRLVKIIESIADTDFGEVLVDRIVLKRSILT 177 >UniRef50_Q2VZ42 2'-5' RNA ligase n=2 Tax=Magnetospirillum RepID=Q2VZ42_MAGSA Length = 178 Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 45/149 (30%), Positives = 70/149 (46%), Gaps = 21/149 (14%) Query: 41 NLHLTLAFLGEVSAEKEKALSLLAGRIRQPGFTLTLDDAGQW---LRSRVVWLGMRQPPR 97 NLHLTL F+GEV + + + + +P F LTL G + ++ +WLG+ + Sbjct: 35 NLHLTLRFIGEVDEDLAEEIHRGLDALVEPPFALTLAGLGLFGDRHQAHTLWLGVERSD- 93 Query: 98 GLIQLANMLRSQAARSGCFQSNRPFHPHITLLRDASEAVTIPPPGFNWSY---------- 147 L +LA + S A ++G R F+PH+TL R + PPG + Sbjct: 94 ALSRLAARIESAAVQAGAEPETRRFNPHVTLAR-----LKHTPPGRIQDFIDATGPFREE 148 Query: 148 --AVTEFTLYASSFARGRTRYTPLKRWAL 174 AV FTL+ S+ R +Y L+ + L Sbjct: 149 HVAVERFTLFRSTLGRQGAQYDALEHYPL 177 >UniRef50_C6QFN4 2'-5' RNA ligase n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QFN4_9RHIZ Length = 190 Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 40/127 (31%), Positives = 58/127 (45%), Gaps = 6/127 (4%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF AI++P EIR+++ R P R ++ +N H+TL F G++ K + Sbjct: 3 RLFTAIEIPDEIRDELHRLR---LPLPGARWISPENYHITLRFAGDIDNAKAREFIANLA 59 Query: 66 RIRQPGFTLTLDDAGQWLRS--RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 I GF L + G + +W GM +P L LA A +G R F Sbjct: 60 SIDVDGFELRITGLGAFGGDDPHSIWAGM-EPNAKLDDLARAHEKAARNAGLAPETRAFR 118 Query: 124 PHITLLR 130 PH+TL R Sbjct: 119 PHVTLAR 125 >UniRef50_A9IDL0 Putative 2'-5' RNA ligase n=3 Tax=Bordetella RepID=A9IDL0_BORPD Length = 188 Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 56/167 (33%), Positives = 73/167 (43%), Gaps = 4/167 (2%) Query: 7 LFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAGR 66 LFFA+ + + W A GR + D LHLTLAFLG V AE+ AL+ R Sbjct: 21 LFFALWPGPALAATLADWAAQAQAACGGRAMRLDTLHLTLAFLGAVDAERAAALAAATAR 80 Query: 67 IRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPHI 126 R + +LD G + R +VW G P L + + L + G + + F PH+ Sbjct: 81 QRAEPGSFSLDRYGTFARQGIVWAGPTLVPPALQRTHDALWNWLEPLGFARPPQAFKPHV 140 Query: 127 TLLRDASEAVTIP--PPGFNWSYAVTEFTLYASSFARGRTRYTPLKR 171 TLLR A P PP W Y + L SS G Y L R Sbjct: 141 TLLRRAPRLDCAPDAPPPVQWQY--RRYVLVQSSPQNGVAHYRVLAR 185 >UniRef50_A1RS17 2'-5' RNA ligase n=5 Tax=Thermoproteaceae RepID=A1RS17_PYRIL Length = 187 Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 3/100 (3%) Query: 37 VAADNLHLTLAFLGEVSAEKEKALSLLAGRIRQPGFTLTLDDAGQW---LRSRVVWLGMR 93 V +NLHLTL FLGE+ + + IR F + L G + + RV+W+G+ Sbjct: 38 VEKENLHLTLRFLGEIPQSRVNDIVKSLTTIRFSKFKIALSGLGVFPDLAKPRVLWIGVS 97 Query: 94 QPPRGLIQLANMLRSQAARSGCFQSNRPFHPHITLLRDAS 133 + L+ LAN++R+ + + +R F PH+T+ R S Sbjct: 98 KGLENLVNLANIVRNLVDKYAEHREDREFSPHLTIGRIKS 137 >UniRef50_A0LLA5 2'-5' RNA ligase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LLA5_SYNFM Length = 190 Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 54/186 (29%), Positives = 78/186 (41%), Gaps = 18/186 (9%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVA---ADNLHLTLAFLGEVSAEKEKALSL 62 R F A+DLP+ + Q + R +A VA D +HLTL FLG V+ E+ AL Sbjct: 3 RTFIAVDLPSPV--QAVLERFERELRKADATVAWIRPDRIHLTLKFLGNVAPERIPALRE 60 Query: 63 LAGRIRQPGFTLTLDDAG-----QWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQ 117 + + L AG + RV+W+G+R L L + + G Sbjct: 61 ALESVSRTVSPFRLQAAGCGAFPTIRQMRVIWVGLRGDADRLGDLKQKIEAATVPLGFES 120 Query: 118 SNRPFHPHITLLR-------DASEAVTIPPPGFN-WSYAVTEFTLYASSFARGRTRYTPL 169 +RPF PH+TL R + + + F ++ V E LY S +YTPL Sbjct: 121 EDRPFKPHLTLGRVKGRGRLSVLQEILMANQSFEAEAFDVAEVVLYKSDLKPDGAQYTPL 180 Query: 170 KRWALT 175 R T Sbjct: 181 FRAPFT 186 >UniRef50_A3DCR1 2'-5' RNA ligase n=3 Tax=Clostridium thermocellum RepID=A3DCR1_CLOTH Length = 183 Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 48/184 (26%), Positives = 81/184 (44%), Gaps = 16/184 (8%) Query: 6 RLFFAIDLPAEIREQIIHWRAT-HFPPEAGRPVAADNLHLTLAFLGEVSAEK----EKAL 60 R F A+D E++++I+ + +GR +N HLTL FLGE+ K +K L Sbjct: 2 RTFVAVDFNTELKKEILKLQTQLRNLAVSGRWKYINNFHLTLKFLGEIEKSKVQDIKKGL 61 Query: 61 SLLAGRIRQPGFTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQ 117 + G+ ++ F L +D + + RV+WL + L L + + + G + Sbjct: 62 DEVCGKTQK--FCLNIDGLDFFPGNGCLRVLWLKLAGELESLHSLQSEIDIMLEKLGFEK 119 Query: 118 SNRPFHPHITLLRDA---SEAVTIPPPGFNWSYAVTE---FTLYASSFARGRTRYTPLKR 171 R + PH+T+ +D + I N+ +A E L+ S G+ YTPL Sbjct: 120 EKRRYVPHVTIAQDVVFNKDFEEIKGLVGNYRFATIEVQSVNLFKSEQIGGKRVYTPLTE 179 Query: 172 WALT 175 L Sbjct: 180 HKLV 183 >UniRef50_O28125 UPF0097 protein AF_2157 n=1 Tax=Archaeoglobus fulgidus RepID=Y2157_ARCFU Length = 176 Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 38/128 (29%), Positives = 64/128 (50%), Gaps = 5/128 (3%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF A+D+ IRE++ + V +NLH+TL FLGEV EK + Sbjct: 2 RLFVAVDVDDSIREKVKPILKELSGVSGVKAVEPENLHITLLFLGEVGEEKLARIEERLS 61 Query: 66 RIRQPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 + F ++ + G + RVVW+G+++ L +LAN + + + G F+ ++ F Sbjct: 62 EVTFQPFKISFEGVGAFPNPGSPRVVWIGVKEEGE-LTRLANSVYEKLKKLG-FRRDKDF 119 Query: 123 HPHITLLR 130 H+T+ R Sbjct: 120 KAHLTVGR 127 >UniRef50_A9WCY3 2'-5' RNA ligase n=3 Tax=Chloroflexus RepID=A9WCY3_CHLAA Length = 190 Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 47/135 (34%), Positives = 63/135 (46%), Gaps = 7/135 (5%) Query: 2 SEPQ-RLFFAIDLPAEIREQI--IHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEK 58 +EP RLF A++LP +R+++ I R A R +HLTL FLGE + Sbjct: 7 AEPTLRLFIALELPQPVRDELKRIQQRLQGHS-RAARWTDPTGMHLTLHFLGETPERLVE 65 Query: 59 ALSLLAGRIRQPGFTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARSGC 115 L + P +LTLD G + + RVVW+G+R L L L + G Sbjct: 66 PLLTGLRSVSAPALSLTLDRLGCFPANGALRVVWVGLRGDLAALATLHRSLATVIQSLGL 125 Query: 116 FQSNRPFHPHITLLR 130 RPF PHITL R Sbjct: 126 PTETRPFVPHITLAR 140 >UniRef50_A5D3U3 2'-5' RNA ligase n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D3U3_PELTS Length = 193 Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 53/168 (31%), Positives = 80/168 (47%), Gaps = 20/168 (11%) Query: 6 RLFFAIDLPAEIREQI--IHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 RLF A++ P +I++ + I P +A + V NLHLTL FLG V AE+ +++ Sbjct: 5 RLFIAVNFPEQIKKALGAIIGELRQLPSDA-KWVEEHNLHLTLQFLGNVPAEQVDSIAAA 63 Query: 64 AGRIRQ--PGFTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQS 118 GR F L L+ G + R RV+W G+ L +L + ++++ + G Sbjct: 64 LGRSAAGVAPFRLNLNGVGVFPSRARPRVLWAGVSGETAVLSRLQHRVQTELGQLGFPAE 123 Query: 119 NRPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRY 166 R F PH+TL R S P GF+ AV E A RG ++ Sbjct: 124 KRQFSPHLTLARFRS------PAGFS---AVME---RAEEIVRGLDKF 159 >UniRef50_C8WMV6 2'-5' RNA ligase n=2 Tax=Coriobacteriaceae RepID=C8WMV6_EGGLE Length = 182 Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 58/178 (32%), Positives = 78/178 (43%), Gaps = 14/178 (7%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEK-----EKAL 60 R F A+DLP + + GR + D HLTLAFLG+V + + Sbjct: 2 RTFIALDLPPDFADDAAALARRLSASMEGRFLKRDTYHLTLAFLGDVDEAQLAAATDALE 61 Query: 61 SLLAGRIRQPGFTLTLDDAGQWLRSR--VVWLGMRQPPRGLIQLANMLRSQA-ARSGCFQ 117 + AG P L D G++ R+ +WLG+ P L QLA LR + AR F Sbjct: 62 AACAGASPVP---LRSDGLGKFGRATDATLWLGIAAAPE-LEQLAARLRDELRARDVPFD 117 Query: 118 SNRPFHPHITLLRDAS-EAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 + +PF H TL R A V +P F + T+ TLY S+ R Y PL L Sbjct: 118 A-KPFKAHFTLARRARIPHVGLPHLAFPQNDEATDVTLYKSTLDRAGAVYKPLHTVCL 174 >UniRef50_B8D3G7 2'-5' RNA ligase n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D3G7_DESK1 Length = 192 Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 40/134 (29%), Positives = 61/134 (45%), Gaps = 5/134 (3%) Query: 2 SEPQRLFFAIDLP-AEIREQIIHWRATHFPPEAG-RPVAADNLHLTLAFLGEVSAEKEKA 59 E R F AI+L E+ ++I R +PV +N+HLTL F+GEV Sbjct: 6 GEIIRCFIAIELKNQEVLRRLIEIRDKITATGVDLKPVEDENIHLTLRFIGEVPRSVVDE 65 Query: 60 LSLLAGRIRQPGFTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCF 116 + I GF + + + G + R RV+W G+ + L++L ++ + R G Sbjct: 66 VCGFINTISYKGFKIHVKNIGGFPSLERPRVIWAGIEEGSDELLELYRIVEAGLRRIGIK 125 Query: 117 QSNRPFHPHITLLR 130 F PHITL R Sbjct: 126 PEREEFTPHITLAR 139 >UniRef50_C6PE45 2'-5' RNA ligase n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PE45_CLOTS Length = 169 Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 36/146 (24%), Positives = 66/146 (45%), Gaps = 11/146 (7%) Query: 34 GRPVAADNLHLTLAFLGEVSAEKEKALSLLAGRIRQ--PGFTLTLDDAGQWL---RSRVV 88 GR DNLH+TL F GE++ E+ + + I F + L+ G + RV+ Sbjct: 17 GRWTNKDNLHITLKFFGEINVEEVNKIREITNNISLSFKSFGIRLNKIGCFEGKDNIRVL 76 Query: 89 WLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPHITLLRDASEAVTIPPPG----FN 144 W+ + + L+ L + L ++ +++G + ++ F HIT+ RD + +I N Sbjct: 77 WVNV-VDDKNLMALHDALETELSKAGYRKDDKKFKTHITIARDITLIKSIEEINSIYKLN 135 Query: 145 WSY-AVTEFTLYASSFARGRTRYTPL 169 Y ++ L S + Y P+ Sbjct: 136 SDYFMISNIYLMESKLENNKRVYVPI 161 >UniRef50_Q6L1E4 2'-5' RNA ligase n=1 Tax=Picrophilus torridus RepID=Q6L1E4_PICTO Length = 160 Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 18/162 (11%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 +R F A P I ++I++ H G+PV+ D +H+T F G ++ K + + Sbjct: 3 KRCFIA--SPVNIGDEILNNIEFH-----GKPVSPDIMHITYYFYGNINETKIERICSDL 55 Query: 65 GRIRQPGFTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 +I F + + G + +R+V+L ++ ML+ Q +R S++ Sbjct: 56 LKIDFKRFKIKITGLGAFPSKRDARIVYLSIKSDE------LMMLQRQISRLLSL-SSKD 108 Query: 122 FHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGR 163 F PHITL R + V +P ++ Y +T+ LY S F R Sbjct: 109 FIPHITLYR-SKTPVKLPDVKLDYDYEITKVCLYESIFENKR 149 >UniRef50_C3XAD7 2',5' RNA ligase n=1 Tax=Oxalobacter formigenes OXCC13 RepID=C3XAD7_OXAFO Length = 204 Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 39/130 (30%), Positives = 60/130 (46%), Gaps = 4/130 (3%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF+A+ +P ++ + H +G+ +NLH+TL FLG AL+ Sbjct: 22 RLFYAL-IPDDVTNARLQECQIHV---SGKKTPPENLHMTLFFLGNQPKRNLPALNRFLD 77 Query: 66 RIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPH 125 RI F + LD G + + + W+G Q P L ++ R + N F PH Sbjct: 78 RISFEPFEMKLDKIGYFPKIGLSWIGPEQTPAQLARMFEDTRQFLIPAYLKDKNENFRPH 137 Query: 126 ITLLRDASEA 135 ITL R +S+A Sbjct: 138 ITLARRSSKA 147 >UniRef50_C4XNB5 2'-5' RNA ligase n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XNB5_DESMR Length = 187 Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 60/187 (32%), Positives = 76/187 (40%), Gaps = 25/187 (13%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVA---ADNLHLTLAFLGEVSAEKEKALSL 62 RLF I LP + + P A P DN HLTL FLGE A + ++ Sbjct: 3 RLFVGIGLP-PAHQAVAAGLVARLRPLACGPATWTRPDNAHLTLKFLGETDAARLPDITA 61 Query: 63 LAGRIRQPGFTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 GR+ F L + G + R RVVW G+ + LA + + AR G Sbjct: 62 ALGRVAFAPFPLAVAGGGFFPSPSRPRVVWAGLAEGADSCRTLAAAVDAALARIGFAVEA 121 Query: 120 RPFHPHITL--LRDASEAV-----------TIPPPGFNWSYAVTEFTLYASSFARGRTRY 166 RPF H+TL LRDAS T+ PP V TLY S+ RY Sbjct: 122 RPFAAHLTLGRLRDASRGCDVRGMLAVLGETVWPPA-----TVEALTLYESTLGPQGPRY 176 Query: 167 TPLKRWA 173 L R+A Sbjct: 177 VALARFA 183 >UniRef50_B7GK61 2'-5' RNA ligase n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GK61_ANOFW Length = 188 Score = 55.1 bits (131), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 47/177 (26%), Positives = 83/177 (46%), Gaps = 13/177 (7%) Query: 8 FFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAGRI 67 F AI LP E+++Q+ H + + V ++ H+TLAFLG + E+ K ++ ++ Sbjct: 16 FLAISLPNELKKQL-HSFISEWKAPFRLFVHEEDYHITLAFLGRATEEERKQIAEYMPKV 74 Query: 68 --RQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPH 125 + F+L L + + SR++W G+++ R L L + + G RPF PH Sbjct: 75 VRKHRAFSLQLSEVYSF-GSRILWYGVKEESR-LFSLRQDVYDVCRQIGFSLDARPFTPH 132 Query: 126 ITLLRD-------ASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALT 175 ITL + + E G + + V + LY + + +Y PL R+ L+ Sbjct: 133 ITLAKKWNGSFPFSLETYPRKIEGEDIRFFVHDVVLYETHMDQT-PKYKPLMRFPLS 188 >UniRef50_B5YJG0 2'-5' RNA ligase n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YJG0_THEYD Length = 186 Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 50/192 (26%), Positives = 86/192 (44%), Gaps = 28/192 (14%) Query: 6 RLFFAIDLPAEIRE---QIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSL 62 RLF AI++P EI+E Q+I+ + + + V N H+TL FLGEV+ E + Sbjct: 2 RLFIAIEIPDEIKEFLYQLIYLKTS---LDGVSIVQKGNFHITLKFLGEVN---EGLIPD 55 Query: 63 LAGRIRQPG-----FTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANMLRSQAARSG 114 + +R+ FTL + G + + RV+W+G L ++A + + G Sbjct: 56 ITNTLRKISNGFSPFTLKITHPGVFPDKFKPRVIWIGTENTD-SLKEMAKRIDEEMESLG 114 Query: 115 CFQSNRPFHPHITLLRDAS--------EAVTIPPPGFN--WSYAVTEFTLYASSFARGRT 164 + ++ F HIT+ R + E + G + + V EF L S+ + Sbjct: 115 FKREDKNFKSHITVARVKNFHNGKYLFEKILKKFSGESSQLKFQVEEFVLMKSTLTPKGS 174 Query: 165 RYTPLKRWALTQ 176 Y L+R+ L + Sbjct: 175 IYDVLQRFPLVK 186 >UniRef50_B1L7J5 2'-5' RNA ligase n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L7J5_KORCO Length = 187 Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 8/134 (5%) Query: 4 PQRLFFAIDLPA-EIREQIIHWRATHFPPEAG-RPVAADNLHLTLAFLGEVSAEK-EKAL 60 P R F AID+ E+ +I+ + A +PV +NLHLTL FLGEV ++ + + Sbjct: 2 PIRSFIAIDIEDPEVISKILSIQEEICSSSAKLKPVERENLHLTLKFLGEVEEDRLTQVM 61 Query: 61 SLLAGRIRQ-PGFTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCF 116 S++ +++ F + L G + R VVW+G + +++A+ L ++ G F Sbjct: 62 SIMDDILKKFSQFRMKLKGIGAFPTINRPNVVWIGAEEGREAFVRVASELDRALSKMG-F 120 Query: 117 QSNRPFHPHITLLR 130 Q + PH+T+ R Sbjct: 121 QREKGIEPHLTIAR 134 >UniRef50_Q2FTJ3 2',5' RNA ligase n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FTJ3_METHJ Length = 183 Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 44/131 (33%), Positives = 62/131 (47%), Gaps = 10/131 (7%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRP----VAADNLHLTLAFLGEVSAEKEKALS 61 RLF AIDLP EIREQ +R + R V +++H+TL F+GEVS ++ Sbjct: 3 RLFVAIDLPDEIREQ---FRDVQDGLRSSRARLTLVDQESMHITLKFIGEVSGSALSQIT 59 Query: 62 LLAGRIRQPGFTLTLDDAGQWLRS--RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 + I F++ + G + RVVW + P + LA + S A G Sbjct: 60 EILQTIEASPFSMEVGLIGTNSQRAPRVVWAEVDDPGQCR-ALAESIDSSLASLGFEPEK 118 Query: 120 RPFHPHITLLR 130 R F PHIT+ R Sbjct: 119 RKFRPHITIAR 129 >UniRef50_UPI000178815C 2''''-5'''' RNA ligase n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178815C Length = 185 Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 46/134 (34%), Positives = 66/134 (49%), Gaps = 10/134 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRAT-HFPPEAGRPVAADNLHLTLAFLGEVS----AEKEKA 59 RLF A+ LP+E+ +I W T + V + H+TL FLG+ AE A Sbjct: 2 DRLFVAVRLPSEVSSRIQDWTETLRKHANFKKWVHPQDYHITLQFLGDTPSHRIAELTGA 61 Query: 60 LSLLAGRIRQPGFTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARSGCF 116 L +A + R+P F L+L DAG + S R++W G+ L +L + S+ G Sbjct: 62 LQEVA-KERKP-FKLSLYDAGVFGASGSPRILWAGVGGDLNALAELQQSVVSRMESFGFV 119 Query: 117 QSNRPFHPHITLLR 130 RPF PHIT+ R Sbjct: 120 PEERPFRPHITVGR 133 >UniRef50_Q0HML7 2'-5' RNA ligase n=8 Tax=Shewanella RepID=Q0HML7_SHESM Length = 190 Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 37/107 (34%), Positives = 52/107 (48%), Gaps = 1/107 (0%) Query: 26 ATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAGRIRQPGFTLTLDDAGQWLRS 85 A H P A +PV NLHLTLAFLG + + L ++ +P F++TLD W ++ Sbjct: 27 APHLAPHA-KPVIQSNLHLTLAFLGLTNPTQVAQLLDGVDKLAKPRFSVTLDSIAVWPKA 85 Query: 86 RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPHITLLRDA 132 +V L L L + + A + S PF PHI+L R A Sbjct: 86 QVCCLKGDSISPELALLTSQAQDLAQQLQLHLSEHPFRPHISLFRKA 132 >UniRef50_C3BR82 2'-5' RNA ligase n=3 Tax=Bacillus RepID=C3BR82_9BACI Length = 200 Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 12/131 (9%) Query: 8 FFAIDLPAEIREQIIHWRATHFPPEAGRP-VAADNLHLTLAFLGEVSAEK----EKALSL 62 F A+ LP I+E + +++ R V ++ H+TLAFLG + E+ EK L L Sbjct: 22 FLAVTLPDHIKEILENYKEEMKDKLPFRSWVYKEDYHITLAFLGSATQEQLQGIEKGLQL 81 Query: 63 LAGRIRQPGFTLTLDDA---GQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 L + LTL + G R+ W G+++ + L + + + R+G Sbjct: 82 LTNKTE---LDLTLQNFSIFGLVESPRIFWAGLKEN-QALFDMQKQVHAICERNGFSLET 137 Query: 120 RPFHPHITLLR 130 RP+HPHIT+ R Sbjct: 138 RPYHPHITVAR 148 >UniRef50_B8FSV2 2'-5' RNA ligase n=2 Tax=Desulfitobacterium hafniense RepID=B8FSV2_DESHD Length = 188 Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 55/184 (29%), Positives = 81/184 (44%), Gaps = 18/184 (9%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEA--GRPVAADNLHLTLAFLGEVS----AEKEKA 59 R F ID E++++I H + A GR DN HLTL FL ++S A+ +++ Sbjct: 7 RAFLGIDFTEEVKDEI-HELQQNLKGYALKGRWKGRDNFHLTLKFLAQISFAQKAQIDES 65 Query: 60 LSLLAGRIRQPGFTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCF 116 L L R +P F L L G + RV+WLG+ + L L + G Sbjct: 66 LQSLC-RKEKP-FNLELKGLGVFGGKESCRVLWLGLAGDMQDLRSLHKKVDQVLTPLGFP 123 Query: 117 QSNRPFHPHITLLRD-----ASEAVTIPPPGFNWS-YAVTEFTLYASSFARGRTRYTPLK 170 RPF PHITL +D E + GF ++ V L+ S + + YT L Sbjct: 124 PERRPFSPHITLGQDIVFAGGFEEIQAKVGGFEFTPTHVERIHLFKSEQVQFKRIYTKLA 183 Query: 171 RWAL 174 ++L Sbjct: 184 DYSL 187 >UniRef50_B8CXC1 2'-5' RNA ligase n=1 Tax=Halothermothrix orenii H 168 RepID=B8CXC1_HALOH Length = 189 Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 68/135 (50%), Gaps = 13/135 (9%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRP---VAADNLHLTLAFLGEVSAEK----EK 58 RLF A+++P ++ +I + + + V DN H+TL F+GEV EK + Sbjct: 2 RLFIAVNIPDRTKD-LIERKLITIKRQVRQGIKWVKKDNWHITLKFIGEVGDEKVSEIKD 60 Query: 59 ALSLLAGRIRQPGFTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGC 115 +L ++ R++ F++T++ G + R RV++L +++ L + +L G Sbjct: 61 SLESISERVKP--FSITINGPGAFPDITRPRVMYLSIKEGSDNLTSVYKLLEKDLIDRGF 118 Query: 116 FQSNRPFHPHITLLR 130 +R F PH+TL R Sbjct: 119 KADDREFTPHLTLAR 133 >UniRef50_A8ZY65 2'-5' RNA ligase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZY65_DESOH Length = 193 Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 53/190 (27%), Positives = 80/190 (42%), Gaps = 28/190 (14%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRP----VAADNLHLTLAFLGEVSAEK-EKAL 60 R F A DLPAE+ + + + T AG VA N+HLT+ FLGE+S E +KAL Sbjct: 9 RCFMAFDLPAEVIDDLAGIQKT---VAAGGVKIGWVAPQNIHLTVKFLGEISPEAVQKAL 65 Query: 61 S--------LLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAAR 112 + + +IR G + D R RV+W G+ R L+ +L Sbjct: 66 AAAEQAVKGISPMQIRAQGIGVFPD----MNRPRVLWAGLSGDLRSLVDFHGILDENLFS 121 Query: 113 SGCFQSNRPFHPHITLLR-----DASEAVTIPPPGFNWS---YAVTEFTLYASSFARGRT 164 +G + R F H+TL R D + P ++ + + +Y S Sbjct: 122 AGFGKEKRRFTAHVTLGRIKRAVDVRQLAAAMAPCLDFQSKPFCIDRLMVYKSDLTAAGP 181 Query: 165 RYTPLKRWAL 174 Y+ L +AL Sbjct: 182 VYSRLAAFAL 191 >UniRef50_D1C514 2'-5' RNA ligase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C514_SPHTD Length = 194 Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 59/202 (29%), Positives = 81/202 (40%), Gaps = 40/202 (19%) Query: 1 MSEPQRLFFAIDLPAEIREQII---------HWRATHFPPEAGRPVAADNLHLTLAFLGE 51 M + RLF AI++P E+R+++ WRA PE HLTL F G Sbjct: 1 MQDVWRLFAAIEIPPEVRDRVAAVRDRLRDAGWRAKWVTPE--------GTHLTLKFYGN 52 Query: 52 VSAEKEKAL--SLLAGRIRQPGFTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANML 106 V + AL +L FT+ AG + R RV+WLG+ R L L + Sbjct: 53 VPVDDIPALGAALRPAVATARPFTIEAAGAGAFPNPRRPRVLWLGVAGDVRRLGALQRSV 112 Query: 107 RSQAARSGCFQSNRPFHPHITL----------LRDA----SEAVTIPPPGFNWSYAVTEF 152 +A G R FHPH+T+ LRD +E +PP V Sbjct: 113 EQASAAQGYPPEERAFHPHLTVARVRPEDLGSLRDVERRLAEIAALPP----LPIPVDRV 168 Query: 153 TLYASSFARGRTRYTPLKRWAL 174 TL+ S R YT + + L Sbjct: 169 TLFRSELRRTGAVYTVVDEFPL 190 >UniRef50_Q1GUY9 2',5' RNA ligase n=2 Tax=Sphingomonadales RepID=Q1GUY9_SPHAL Length = 204 Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 75/181 (41%), Gaps = 13/181 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF A+ P +R ++ RA H R + + LHLTL F+GEV + ++ + Sbjct: 4 HRLFVALRPPPPVRALLL--RAMHGI-SGARWQSDEQLHLTLRFIGEVDHHLAEDIAAVL 60 Query: 65 GRIRQPGFTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 G + P + + + R +VW + P L L + AR G R Sbjct: 61 GALHAPAARVRIAGVDLFERQGRPHMVWARI-APEEPLAALHRKVEQCLARVGIAAETRA 119 Query: 122 FHPHITLLR-DASEAVTIPPPGFNWSYAVTEF-----TLYASSFARGRTRYTPLKRWALT 175 F PH+TL R + S P N A F TLY S G +RY P+ R+ L Sbjct: 120 FVPHVTLARLNRSSGPVAPFLALNGDLASDPFLFDHVTLYESEMGHGGSRYHPVARYPLV 179 Query: 176 Q 176 Sbjct: 180 D 180 >UniRef50_Q2BMM5 2',5' RNA ligase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMM5_9GAMM Length = 173 Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 45/168 (26%), Positives = 68/168 (40%), Gaps = 10/168 (5%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF AID+P I++Q+ E R ++ LH+TL F+GE + + Sbjct: 2 RLFLAIDIPDAIQDQVSELVCPEL--EQVRWISCQQLHITLVFIGEQPQHRLDEIIEATA 59 Query: 66 RIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPH 125 F L L G + +S ++WLG+ + L +L L + G R F PH Sbjct: 60 ETNFEPFPLKLSKIGHF-KSGIIWLGVEE-SEPLKRLQKSLSHKIRSLGIELEQRKFIPH 117 Query: 126 ITLLR------DASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYT 167 +TL R + V+ GF + V F L +S Y Sbjct: 118 LTLGRCKQLTPEILSKVSTQGLGFETGFNVEAFQLKSSILKANGAEYV 165 >UniRef50_Q1NWG3 2',5' RNA ligase n=4 Tax=Deltaproteobacteria RepID=Q1NWG3_9DELT Length = 181 Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 42/129 (32%), Positives = 61/129 (47%), Gaps = 8/129 (6%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF A+DLP + E + A F R + A+ LHLTL F+GEV K + G Sbjct: 3 RLFTAVDLPPAVAESLA---AMGFGLPGARWLPAEQLHLTLRFIGEVDGGIFKDIRAALG 59 Query: 66 RIRQPGFTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQ-SNRP 121 +R FT+ L G + +RV+W G+ +P + +L + R G R Sbjct: 60 DVRSAPFTIELRGFGCFPPRGPARVLWAGV-EPAAPVTELCKRVEKALVRPGLVAPEKRK 118 Query: 122 FHPHITLLR 130 F PH+T+ R Sbjct: 119 FAPHVTVAR 127 >UniRef50_A8U4H0 2'-5' RNA ligase n=1 Tax=alpha proteobacterium BAL199 RepID=A8U4H0_9PROT Length = 196 Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 52/183 (28%), Positives = 72/183 (39%), Gaps = 20/183 (10%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF AI +P + + + + + R V D+ HLTL F+G+V L Sbjct: 1 MRLFVAIAMPEAVADPLCDLQGGL---DGARWVDPDDFHLTLRFIGDVDRGTADDLVATL 57 Query: 65 GRIRQPGFTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 + P F L L G + R R +W G+ +P L L + S A R+G R Sbjct: 58 SSLHAPAFDLRLSGLGHFGSGHRLRALWAGV-EPQPALTLLHGRVESAARRAGLPPEGRR 116 Query: 122 FHPHITLLR--------DASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRY-----TP 168 F PH+TL R AS + P + V E L+ S R Y P Sbjct: 117 FVPHVTLARMSGPISDDSASHWIGSRSPFVAGPFPVREVVLFESFLGREGPHYERRLVVP 176 Query: 169 LKR 171 L R Sbjct: 177 LDR 179 >UniRef50_A1RX48 2'-5' RNA ligase n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RX48_THEPD Length = 187 Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 39/148 (26%), Positives = 65/148 (43%), Gaps = 10/148 (6%) Query: 37 VAADNLHLTLAFLGEVSAEKEKALSLLAGRIRQPGFTLTLDDAGQW---LRSRVVWLGMR 93 V +NLH+TL FLGE+ + + ++ F + L G + R RV+W+G+ Sbjct: 39 VEKENLHITLRFLGEIPPHTLEEVRNRLAKLSYHRFKIVLKGVGGFPSLDRPRVLWIGVD 98 Query: 94 QPPRGLIQLANMLRSQAARSGCFQSNRPFHPHITLLR-------DASEAVTIPPPGFNWS 146 + R L +LA ++R+ + + FHPH+T+ R A + Sbjct: 99 EGSRELSELAELVRTSLKGVKLPEPDEEFHPHLTIARLKGPLSAGARRIIAGSADTVFGE 158 Query: 147 YAVTEFTLYASSFARGRTRYTPLKRWAL 174 VT F+LY S+ Y + R+ L Sbjct: 159 QEVTSFSLYKSTLTPRGPIYDEIARYDL 186 >UniRef50_Q0AKK0 2'-5' RNA ligase n=1 Tax=Maricaulis maris MCS10 RepID=Q0AKK0_MARMM Length = 179 Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 52/168 (30%), Positives = 72/168 (42%), Gaps = 13/168 (7%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF A+ +P + +I + P RP +N H+TL F G V + + L Sbjct: 4 RLFAALPVPDSLHAEIARLQKG-VPGARWRP--RENFHITLRFFGTVDERQAEDLDAELA 60 Query: 66 RIRQPGFTLTLDDAGQW--LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 I P F L L +G + L R +WLG+R P L +L A R +R FH Sbjct: 61 HIAMPPFDLALLGSGWFGKLDPRALWLGVR-PSEALSELNEKCERAARRCKLEPEHRNFH 119 Query: 124 PHITLLR------DASEAVTIPPPGFNWS-YAVTEFTLYASSFARGRT 164 PH+TL D GF + T FTLY+S +RG + Sbjct: 120 PHMTLAYLQGTPIDRLTRFAERTGGFATEPWRATHFTLYSSWTSRGES 167 >UniRef50_A3ZLX4 2'-5' RNA ligase n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZLX4_9PLAN Length = 189 Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 14/152 (9%) Query: 37 VAADNLHLTLAFLGEVSAEKEKALSLLAGRIRQP--GFTLTLDDAGQW---LRSRVVWLG 91 V DN+H+TL+FLG+++ E+ +S A R + F + G + R R +WLG Sbjct: 37 VEPDNMHITLSFLGDITPEETIDVSRAAMRGAESVSSFDFMIGGVGAFPDITRPRTIWLG 96 Query: 92 MRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPHITL-----LRDASEAVT-IPPPGFNW 145 M Q Q+ + + + A G ++ R +HPH+++ L E +T + + Sbjct: 97 MTQGHDAFCQMQHAIAEELATIGYPETARKYHPHLSIGRIKRLSSQVERLTELLEEHAEF 156 Query: 146 SYAVT---EFTLYASSFARGRTRYTPLKRWAL 174 V+ E +YAS R +YT + R L Sbjct: 157 EAGVSPAMEANIYASQLERRGPKYTLIGRAEL 188 >UniRef50_Q2NI02 Predicted 2'-5' RNA ligase n=1 Tax=Methanosphaera stadtmanae DSM 3091 RepID=Q2NI02_METST Length = 183 Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 65/136 (47%), Gaps = 11/136 (8%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRP--VAADNLHLTLAFLGEVSAEKEKALSLL 63 R F AI++ ++ +I + T + + V +N+HLTL F GE++ K+K +S + Sbjct: 2 RAFLAIEIEESLKNKIKKTQQTIKNTNSAKIKYVEDENIHLTLKFFGEINQRKQKQISSI 61 Query: 64 AGRIRQ--PGFTLTLDDAG---QWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQS 118 + + +T+ L G R RV+W G++ I L L + + G F+ Sbjct: 62 IRKTTENYETYTMKLVKVGAFPNMNRPRVIWTGIKDND-TTINLIKELDDEFNKIG-FKK 119 Query: 119 NRPFHPHITL--LRDA 132 + PHIT+ +RD Sbjct: 120 EHDYTPHITIGRVRDV 135 >UniRef50_Q28V17 2'5' RNA ligase n=1 Tax=Jannaschia sp. CCS1 RepID=Q28V17_JANSC Length = 178 Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 1/98 (1%) Query: 34 GRPVAADNLHLTLAFLGEVSAEKEKALSLLAGRIRQPGFTLTLDDAGQWLR-SRVVWLGM 92 G+PV +NLHLTLA+LGEVS + + L + R P + + G + R + G Sbjct: 27 GKPVPEENLHLTLAYLGEVSEDVLETLHDMLSAARLPSADIAFEGLGTFAEMERGLTFGA 86 Query: 93 RQPPRGLIQLANMLRSQAARSGCFQSNRPFHPHITLLR 130 P L L + A ++G R F PH+TL R Sbjct: 87 VAPSDALTALQTKVAQLARQAGVLLPRRRFRPHVTLTR 124 >UniRef50_Q46QC5 2',5' RNA ligase n=4 Tax=Cupriavidus RepID=Q46QC5_RALEJ Length = 193 Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 41/128 (32%), Positives = 59/128 (46%), Gaps = 8/128 (6%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAG-RPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF A+D P EI +++ P +G R +HLTL FLGE AE+ + + Sbjct: 3 RLFIAVDAPPEIAARLVK----SVPTASGIRAAPTGQVHLTLRFLGECDAEQTERIRAAL 58 Query: 65 GRIRQPGFTLTLDDAGQW--LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 +R FTL + G++ + V+W GM P L L + + G R F Sbjct: 59 DAVRAADFTLNVAGVGRFRGRQGSVLWAGMAPCPE-LDALYVAITAALQSVGIAPEPRRF 117 Query: 123 HPHITLLR 130 PH+TL R Sbjct: 118 RPHLTLAR 125 >UniRef50_C0EIB1 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIB1_9CLOT Length = 174 Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 62/127 (48%), Gaps = 3/127 (2%) Query: 6 RLFFAIDLPAEIREQIIH-WRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF A+ L + +++ + + G +NLHLTLAFLGE +A A +L Sbjct: 2 RLFIAVQLSSPVKDTLCQAIESLKKRSLQGNFTRRENLHLTLAFLGE-TARLAAAKRVLD 60 Query: 65 GRIRQPGFTLTLDDAGQWLRSR-VVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 P F+LT+ G++ R +W +P L LA L ++ R+G RPF Sbjct: 61 ELKLPPPFSLTISGLGRFRREGGDIWWAGAEPNDALSDLATQLMARLERTGFPVEKRPFK 120 Query: 124 PHITLLR 130 PH+TL R Sbjct: 121 PHLTLGR 127 >UniRef50_Q11D05 2'-5' RNA ligase n=26 Tax=Rhizobiales RepID=Q11D05_MESSB Length = 199 Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 50/178 (28%), Positives = 78/178 (43%), Gaps = 13/178 (7%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF A+++P R+ + R + +N HLTL F+G+V ++ Sbjct: 3 RLFTALEIP---RDAALSLSLLRGGLPGARWIDVENYHLTLRFIGDVEGHVADEIANALD 59 Query: 66 RIRQPGFTLTLDDAGQWLRSR--VVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 R+R+P F LTL G + + + VW G+ P L L + R G R F Sbjct: 60 RVRRPSFLLTLSGVGAFGQKKPHSVWAGVAASP-DLQALQGEIERICQRLGLPAEQRKFT 118 Query: 124 PHITL--LRDAS--EAVTIPPPGFNWS---YAVTEFTLYASSFARGRTRYTPLKRWAL 174 PH+TL L++AS E + N++ + V F L +S + G Y + W L Sbjct: 119 PHVTLARLKNASPHEVASYLSARGNFAAMPFRVNRFVLMSSRDSVGGGPYVVEEAWPL 176 >UniRef50_B9KQ60 2'-5' RNA ligase n=4 Tax=Rhodobacter sphaeroides RepID=B9KQ60_RHOSK Length = 193 Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 57/186 (30%), Positives = 75/186 (40%), Gaps = 26/186 (13%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 R F A+DLPAE+R + F R + ++ HLTL FLGEV +A Sbjct: 3 RAFVALDLPAEVRSALA---VQQFLLPLPRKIEPESFHLTLLFLGEVPEPVLEAAHEEFE 59 Query: 66 RIRQPGFTLTLDDAGQW--LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 I +P F L + G + R R W G+R P L +L + A +G R F Sbjct: 60 TIVRPPFGLEVAGLGLFGGERPRAAWAGLR-PSDPLARLQCRIERAARVAGIEPERRRFV 118 Query: 124 PHITLLRDASEAVTIPPPGFNW---------------SYAVTEFTLYASSFARGRTRYTP 168 PH+TL R A PPP + + VT F LY S RY Sbjct: 119 PHVTLGRFAP-----PPPEERFRLERAVAEGASFRGGGFEVTRFVLYRSHPGPKGARYEE 173 Query: 169 LKRWAL 174 L + L Sbjct: 174 LATYPL 179 >UniRef50_B0SWI1 2'-5' RNA ligase n=1 Tax=Caulobacter sp. K31 RepID=B0SWI1_CAUSK Length = 189 Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 57/184 (30%), Positives = 84/184 (45%), Gaps = 24/184 (13%) Query: 5 QRLFFAI----DLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL 60 RLFFAI A I + RA H +GRP+A + H+TL LG+ + + + Sbjct: 15 DRLFFAIFPDPATAAGIAHRAAQLRAAH--ALSGRPLAPERFHVTLHHLGDHAGVRRDIV 72 Query: 61 SLL---AGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQA---ARSG 114 ++ A I P F +T D A + + + Q GL L R AR+G Sbjct: 73 AMASEAAEMIATPAFDVTFDRAASF-HNGGNNPHVLQGGEGLDALKAFQRDLGLAMARAG 131 Query: 115 CFQ-SNRPFHPHITLLRD---ASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLK 170 + +++ F PH+T+L D +E P ++ V FTL S GRT + PL+ Sbjct: 132 LGRLADKSFTPHVTMLYDPRLVAEQAVAP-----VTWRVAGFTLVHSLL--GRTEHVPLQ 184 Query: 171 RWAL 174 RWAL Sbjct: 185 RWAL 188 >UniRef50_A8FGD3 2'-5' RNA ligase n=2 Tax=Bacillus pumilus RepID=A8FGD3_BACP2 Length = 183 Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 53/185 (28%), Positives = 83/185 (44%), Gaps = 11/185 (5%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEK-EKA 59 MSE + F I +P ++ QI + A + H+TL FLG +S E+ +K Sbjct: 1 MSENRHYFIGIHIPEQLASQIKKDIDQRSGLSFQKWTAPHDYHVTLIFLGAISEERLKKI 60 Query: 60 LSLLAGRIRQPG-FTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGC 115 + LL ++ F+L L++ GQ+ R RV + L+ L ++ +G Sbjct: 61 IELLEVLSKEAAAFSLELNEVGQFGTKERPRV-FFAKPDESEPLMLLREKVKEAVLSAGH 119 Query: 116 FQSNRPFHPHITLLR----DASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKR 171 RPFHPH+T+ R D S A P + V+ TLY R RY +K+ Sbjct: 120 PVEKRPFHPHMTIARKWNADHSFAEQAPLRKEPYVIEVSSITLYEIR-PRETPRYYAIKQ 178 Query: 172 WALTQ 176 +AL + Sbjct: 179 FALHK 183 >UniRef50_C8X1G4 2'-5' RNA ligase n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X1G4_DESRD Length = 194 Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 58/185 (31%), Positives = 81/185 (43%), Gaps = 18/185 (9%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRP--VAADNLHLTLAFLGEV-SAEKEKALS 61 QRLF + LP ++ + R P R N HLTLAFLG+ SAE E+ Sbjct: 3 QRLFIGLPLPQTYQQGLEALRDEWAPKLRSRLSWTRPGNWHLTLAFLGDTRSAEAERVRQ 62 Query: 62 LLAGRIRQPGFTLTLDDAGQWL-----RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCF 116 L P +TL AG + RV+W+G++ + LA+ + S A G Sbjct: 63 ALEAVHSAP---ITLQAAGGGAFPPGKKPRVLWVGLQHGRQESAALADQIWSVLAPLGIQ 119 Query: 117 QSNRPFHPHITLLR------DASEAVTIPPPGFNW-SYAVTEFTLYASSFARGRTRYTPL 169 RPF H+TL R D+ EA+ W S + EF L+ S YT + Sbjct: 120 PPGRPFRAHLTLARVKQERGDSWEALFRSLGEKQWPSCQIAEFVLWQSELTPKGPVYTAV 179 Query: 170 KRWAL 174 +R+AL Sbjct: 180 QRYAL 184 >UniRef50_C6J532 2'-5' RNA ligase n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J532_9BACL Length = 188 Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 43/145 (29%), Positives = 65/145 (44%), Gaps = 6/145 (4%) Query: 2 SEPQRLFFAIDLPAEIREQIIHWRATHFPP-EAGRPVAADNLHLTLAFLGEVSAEKEKAL 60 E RLF AI LP E++ ++ W + + + V A++ H+T+ FLG+ + + L Sbjct: 5 EEKWRLFIAIPLPQEVKYKLEEWCSEQKTRLDFKKWVHAEDYHITVQFLGDTAPGRLDEL 64 Query: 61 SLLAGRIRQPGFTLTLDDAGQWLRSR-----VVWLGMRQPPRGLIQLANMLRSQAARSGC 115 R + L L+ AG R V+W G+R GL L + + S+ G Sbjct: 65 LASLSRAAKGMGPLELEAAGIGTFGRPASPSVLWAGVRGEVAGLESLHSRVTSENRALGF 124 Query: 116 FQSNRPFHPHITLLRDASEAVTIPP 140 R F PHITL R E + P Sbjct: 125 VPEERRFSPHITLARKYREGARLDP 149 >UniRef50_C1TRT5 2'-5' RNA ligase n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TRT5_9BACT Length = 194 Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 43/139 (30%), Positives = 67/139 (48%), Gaps = 21/139 (15%) Query: 6 RLFFAIDLPAEIR----EQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALS 61 R F A+ +P ++R E I+ R P R V ++LHLTL F GE+ +EKA Sbjct: 5 RSFLALPIPEKLRVLAEELIVQGRREFRSP---RWVRGEHLHLTLRFFGEL---EEKAYR 58 Query: 62 LLAGRIRQPGFT-------LTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAA 111 LA ++ F+ + L + G + R V+W+ + + R + +LA + A Sbjct: 59 RLAKSLKT-AFSDAPSVEGMALGEVGCFRRKGSISVIWMAVEERDRQITRLAELAEKTAV 117 Query: 112 RSGCFQSNRPFHPHITLLR 130 +G RPF PH+TL R Sbjct: 118 ETGLSPERRPFRPHMTLAR 136 >UniRef50_Q6MIS1 Putative 2'-5' RNA ligase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MIS1_BDEBA Length = 209 Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 46/151 (30%), Positives = 65/151 (43%), Gaps = 13/151 (8%) Query: 37 VAADNLHLTLAFLGEVSAEKEKALSLLAGRIRQ--PGFTLTLDDAGQWLR---SRVVWLG 91 V DN H+T+ FLGE E+ + ++ + Q F L ++D G + +RV+WLG Sbjct: 40 VPTDNYHVTITFLGERPEEEVQRVADALAHVCQNFAPFDLKIEDVGAFSNEHDARVLWLG 99 Query: 92 MRQPPRGLIQLANMLRSQAARSGCFQ--SNRPFHPHITL--LRDASEAVTIPPPGFNWSY 147 + Q R L Q L + R F PH+T LR+ + P S+ Sbjct: 100 V-QNKRSLNQFKEALDRELVDKNLLPQIEERAFSPHLTFGRLRNPRSVKDMISPFKRKSF 158 Query: 148 A---VTEFTLYASSFARGRTRYTPLKRWALT 175 VTE LY S+ Y PL R LT Sbjct: 159 GKIHVTEIVLYESTLQGAFPVYKPLARCQLT 189 >UniRef50_D1ZYF9 Whole genome shotgun sequence assembly, contig_3985 n=2 Tax=cellular organisms RepID=D1ZYF9_SORMA Length = 183 Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 40/129 (31%), Positives = 58/129 (44%), Gaps = 7/129 (5%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF A+ P +RE + + E R + LHLTL ++GEV + ++++ Sbjct: 2 HRLFIALRPPVAMREALFDVQDG---VEGARWQDDEQLHLTLRYVGEVERPVAEDIAVVL 58 Query: 65 GRIRQPGFTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 +R P F L L GQ+ R R +W G+ P + L + R G R Sbjct: 59 QGVRAPAFDLALSGVGQFDAGRRGRALWAGV-TPHDAVAALHRKVDHALVRIGLPPEGRA 117 Query: 122 FHPHITLLR 130 F PHITL R Sbjct: 118 FLPHITLAR 126 >UniRef50_A5V4K1 2'-5' RNA ligase n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V4K1_SPHWW Length = 177 Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 53/180 (29%), Positives = 77/180 (42%), Gaps = 15/180 (8%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF A+ P +RE ++ A R LHLTL F+GEV + ++ Sbjct: 2 HRLFIALRPPLPMREALL---AAMGDIPGARWQDDAQLHLTLRFVGEVDRHVAEDIAAAL 58 Query: 65 GRIRQPGFTLTLDDAGQW-LRSRV--VWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 G + P F L LD G + R R+ +W G+ P + + L + + R+G R Sbjct: 59 GAVSHPAFALRLDGVGCFDRRGRIDNIWAGV-TPHQPVKSLHAAVTAALVRAGIAPEERA 117 Query: 122 FHPHITLLRDA---SEAVTIPPPGFNWSYAV----TEFTLYASSFARGRTRYTPLKRWAL 174 F PHITL R A + + T+P W V F LY S Y+ + R+ L Sbjct: 118 FVPHITLARFARGQAPSGTLPMDSL-WPAPVEGRFDHFLLYESHLGASGASYSAIARYRL 176 >UniRef50_A3UI27 Putative uncharacterized protein n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UI27_9RHOB Length = 187 Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 6/125 (4%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 R+F A+ L + +Q T P RP +NLH+TL F GE+ + L G Sbjct: 9 RVFAALPLSDTVADQACA-EMTGVPDANWRP--RENLHITLCFYGELDEPVIEELDSALG 65 Query: 66 RIRQPGFTLTLDDAGQWLRS--RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 ++R F L L+ AG++ +WLG+ P L+ LA R A ++G R + Sbjct: 66 QVRLAPFELRLEGAGRFGGGDPSAIWLGVEHHP-ALMDLARQCRKAARQAGVEIEKRAYL 124 Query: 124 PHITL 128 PH+TL Sbjct: 125 PHLTL 129 >UniRef50_B1ZYS3 2'-5' RNA ligase n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZYS3_OPITP Length = 189 Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 41/131 (31%), Positives = 58/131 (44%), Gaps = 6/131 (4%) Query: 3 EPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSL 62 + QRLF A+ LP +R+ + + P R + LHLTL FLG+ E+ L Sbjct: 2 DTQRLFIAVPLPPAVRDLVA---SLTVPLREVRWTRDEQLHLTLRFLGDTPVEQIDPLCA 58 Query: 63 LAGRIRQPGFTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 I+ F L ++ G + RV+W+G+ L QL + G Sbjct: 59 RLAAIQVEPFLLPVERVGAFPPKASPRVIWVGVGSGHPRLHQLRQKIDDAVLACGLDADL 118 Query: 120 RPFHPHITLLR 130 R FHPHITL R Sbjct: 119 RTFHPHITLGR 129 >UniRef50_A9KM39 2'-5' RNA ligase n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KM39_CLOPH Length = 176 Score = 52.0 bits (123), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 10/133 (7%) Query: 6 RLFFAIDLPAEIR----EQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALS 61 R+F AI+ EI+ EQI++ + G +NLHLTLAFLGEV + + L Sbjct: 2 RIFIAINFTEEIKHNLYEQILNLKGKSIK---GNFTRKENLHLTLAFLGEVDEKHLETLK 58 Query: 62 LLAGRIRQPGFTLTLDDAGQWLRSRVV--WLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 + ++ F + L + + + W+G+ P L L L SG Sbjct: 59 NVINQLEVSEFPINLSNMSAFHNGDELLPWIGIV-PNTKLQVLQQQLTEGLKASGFAHDE 117 Query: 120 RPFHPHITLLRDA 132 + F PH+TL R Sbjct: 118 KKFTPHVTLGRKV 130 >UniRef50_C6CZ97 2'-5' RNA ligase n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CZ97_PAESJ Length = 192 Score = 52.0 bits (123), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 54/190 (28%), Positives = 85/190 (44%), Gaps = 26/190 (13%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRP-----VAADNLHLTLAFLGE--VS 53 M++ R+F AI +PA I QI+ +H P + V +LH+TL F+G+ VS Sbjct: 1 MADNIRIFTAISIPANITGQIV----SHLPDWKNQLSFRKWVDPRDLHITLHFIGDMPVS 56 Query: 54 AEKEKALSLLAGRIRQPGFTL---TLDDAGQWLRSRVVWLGMRQ-PPRGLIQLANMLRSQ 109 + ++ R F+L LD G+ R V+WLG++Q P L + +S Sbjct: 57 SIPTIQAAMQETASRSSSFSLELSKLDCFGREERPSVLWLGIKQLPAELLGLHQLLGQSL 116 Query: 110 AARSGCFQSNRPFHPHITLLRDAS----------EAVTIPPPGFNWSYAVTEFTLYASSF 159 + G RP+ PH+TL R S E ++ P ++ +T TLY + Sbjct: 117 HSGIGYSPETRPYRPHVTLARKYSADEPCTAGKLEELSSPLLQHQTAFDITGITLYRTRL 176 Query: 160 ARGRTRYTPL 169 R Y P+ Sbjct: 177 GE-RPMYEPI 185 >UniRef50_D1Y2L4 2'-5' RNA ligase n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y2L4_9BACT Length = 194 Score = 52.0 bits (123), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 58/181 (32%), Positives = 83/181 (45%), Gaps = 20/181 (11%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAG-RPVAADNLHLTLAFLGEVSAEK-----EKA 59 R FF + L E++++I W A + +G R VA +LH+TL F GE+ ++A Sbjct: 5 RCFFCLPLAPELKKEIAAWIAANRAAISGVRWVAEADLHVTLRFCGEIPQAAAQPLGDRA 64 Query: 60 LSLLAGRIRQPGFTLTLDDAGQWLRS-RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQS 118 +LLA R P LTL + G + R RV+W G+ L +L ++ +G Sbjct: 65 KNLLAERCAAP-LRLTLRETGTFGRPPRVLWAGLGGDTAALERLNALIEGACRDAGLPPD 123 Query: 119 NRPFHPHITLLR-DASEAVTIPPPGFN----WSYAVTEFTLYASSFARGRT-----RYTP 168 R F PH+TL R DAS P + W A +T + F R R RY P Sbjct: 124 GRKFSPHLTLARMDASRGFD--PAALDALRPWKLAGRGWTADRTIFMRSRLTPAGPRYEP 181 Query: 169 L 169 L Sbjct: 182 L 182 >UniRef50_Q8EP21 ABC transporter permease n=1 Tax=Oceanobacillus iheyensis RepID=Q8EP21_OCEIH Length = 189 Score = 52.0 bits (123), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 34/136 (25%), Positives = 62/136 (45%), Gaps = 7/136 (5%) Query: 8 FFAIDLPAEIREQIIHWRATHFPPEAGRP--VAADNLHLTLAFLGEVSAEKEKALSLLAG 65 F IDLP +++ +I + P + H+TL FLGE+ ++ + Sbjct: 8 FIGIDLPNHVKQNLIEVQQK-LPSSFSYKQWTHKFDFHITLTFLGEIDDKQLTNVEQYLN 66 Query: 66 RIRQPGFTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 + + F LTLD G + + RV+W G+ L +L + + + + NRP+ Sbjct: 67 NLEKKPFFLTLDQLGVFGNQKQPRVLWAGLEHSNE-LHELHHQISHMLTQLELSKDNRPY 125 Query: 123 HPHITLLRDASEAVTI 138 PHITL + +++ + Sbjct: 126 RPHITLAKKWNDSTIL 141 >UniRef50_Q5FPP9 2'-5' RNA ligase n=1 Tax=Gluconobacter oxydans RepID=Q5FPP9_GLUOX Length = 187 Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 42/126 (33%), Positives = 68/126 (53%), Gaps = 7/126 (5%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSA-EKEKALSLLA 64 RLF A+DLPA++RE + R + P + V A+N H+TL F+GE++ + + + L Sbjct: 2 RLFVALDLPADVRETLALMRGS-MP--GVQWVPAENHHITLRFIGEITDRHRLEEIDLAL 58 Query: 65 GRIRQPGFTLTL--DDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 R+ F L+L D + L + + +G+ + R L L + + S R+GC + R F Sbjct: 59 SRLAWQPFELSLAQADIREGLTADSLLIGVER-TRQLDALQSQVESALRRAGCPPAKRRF 117 Query: 123 HPHITL 128 P ITL Sbjct: 118 QPAITL 123 >UniRef50_C1YG14 2'-5' RNA ligase n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YG14_NOCDA Length = 196 Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 60/186 (32%), Positives = 77/186 (41%), Gaps = 23/186 (12%) Query: 6 RLFFAIDLPAE----IREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALS 61 RLF A+D P + +R + R H P R HLTL FLGEV AL Sbjct: 2 RLFAALDPPPDTAHALRRAVDRGRG-HTP--GLRWADPGEWHLTLVFLGEVDEALLPALG 58 Query: 62 LLAGRIRQPG--FTLTLDD----AGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGC 115 GR + F +T + G R+ V+W G+ L LA+ LR+ AA G Sbjct: 59 DALGREARGHRPFRITAEGWGAFPGDLRRASVLWAGLGGDTASLHALADGLRAAAAEVGV 118 Query: 116 FQSNRPFHPHITLLRD-------ASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTP 168 NRP+ PHIT+ R + P PG W V E L S R RY Sbjct: 119 PVENRPYVPHITVARSRPARDLTGTADALGPLPGHGWP--VREAHLVESRPER-EDRYRT 175 Query: 169 LKRWAL 174 ++ W L Sbjct: 176 VRTWRL 181 >UniRef50_Q0BX97 2'-5' RNA ligase n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BX97_HYPNA Length = 186 Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 54/187 (28%), Positives = 75/187 (40%), Gaps = 29/187 (15%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF A+ +P E+ + + P + RP +N H+TL F GE++ + + L L Sbjct: 3 RLFAALPIPPEVSAPLRKLQKD-LPGASWRP--EENFHVTLCFYGELTGNQARDLDELLD 59 Query: 66 RIRQPGFTLTLDDAGQWLRSRVVWLGMRQPP---------RGLIQLANMLRSQAARSGCF 116 I F L ++ G W G R+P L LA+ A R G Sbjct: 60 EIEADAFDLRVEGMG--------WFGRREPNAVWARIGECDALRALASQCERAARRLGLP 111 Query: 117 QSNRPFHPHITL-------LRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGR--TRYT 167 PF PHITL L A E V + + F LYAS RG +RY Sbjct: 112 LEKHPFTPHITLAYLHATPLEAAQEWVHTHQSHRSEPFRARLFHLYASRPRRGGGPSRYE 171 Query: 168 PLKRWAL 174 P+ + L Sbjct: 172 PMADYPL 178 >UniRef50_Q3Z6J0 2'-5' RNA ligase family protein n=5 Tax=Dehalococcoides RepID=Q3Z6J0_DEHE1 Length = 193 Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 54/192 (28%), Positives = 87/192 (45%), Gaps = 29/192 (15%) Query: 6 RLFFAIDLPAEIREQIIHWR-ATHFPPEAGRPVAADNLHLTLAFLGEVSAEKE----KAL 60 R F AI+LP E++ ++ R A P +A + V +++HLT+ FLG+ + K L Sbjct: 7 RTFIAIELPPELKTRLAGLRDALPIPSQAVKWVNPESMHLTIKFLGDTPLSQIPNIIKGL 66 Query: 61 SLLAGRIRQPGFTLTLDDAGQW--LRS-RVVWLGMRQPPRGLIQLANMLRSQAARS---- 113 A FTL+ G + L S +V+WLG+ G I+ N L ++ ++ Sbjct: 67 EEAAQVCH--AFTLSTTRIGTFPSLSSPKVIWLGLH----GEIEKLNTLFAEVEKNISGL 120 Query: 114 GCFQSNRPFHPHITL-----------LRDASEAVTIPPPGFNWSYAVTEFTLYASSFARG 162 G R F PH+TL L+ A+E++ PP S+ + L+ S Sbjct: 121 GFPAEKRDFAPHLTLGRLKEVAAKSDLQTAAESLKTAPPFPKTSFKASHICLFQSQLLAA 180 Query: 163 RTRYTPLKRWAL 174 YT L + +L Sbjct: 181 GPVYTRLAQISL 192 >UniRef50_Q2LPL4 2'-5' RNA ligase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LPL4_SYNAS Length = 195 Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 41/138 (29%), Positives = 61/138 (44%), Gaps = 7/138 (5%) Query: 3 EPQRLFFAIDLPAEIREQI--IHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL 60 EP R F AI+ P +R+ + + R + A V + +HLTL F G ++ + Sbjct: 5 EPIRAFLAIEPPEAVRQAMAAVQNRLKYCMSGAISWVRPEGIHLTLKFFGNIAETDVDRI 64 Query: 61 SLLAGRI--RQPGFTLTLDDAG---QWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGC 115 S G + R L + G + R RVVW+G+ L L + Q AR G Sbjct: 65 SAAVGPVASRFAPLDLQVRQVGLFPDFRRPRVVWMGLEGDISALKALQQEVDKQLARYGF 124 Query: 116 FQSNRPFHPHITLLRDAS 133 + +R F H+TL R S Sbjct: 125 HREDRDFRAHLTLARIKS 142 >UniRef50_A8F8W1 2'-5' RNA ligase n=1 Tax=Thermotoga lettingae TMO RepID=A8F8W1_THELT Length = 187 Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 20/135 (14%) Query: 37 VAADNLHLTLAFLGEVSAEKEKALS-LLAGRIRQ-PGFTLTLDDAGQWLRS---RVVWLG 91 V+ +N+HLTL FLGEV + K ++ L RI P F+ ++ G + + RV+WLG Sbjct: 34 VSKENIHLTLFFLGEVQSHKVDEIARHLCHRIMGFPSFSYIVEKLGYFSKQSKPRVIWLG 93 Query: 92 MRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPHITLLRDAS---------EAVTIPPPG 142 ++ + L +L ++S+ + F F PHIT+ R E +T P Sbjct: 94 IKS-NQALQKLYEEMKSELVKHN-FSFEERFSPHITVGRIKDFPGAWQPLIEDITFEPI- 150 Query: 143 FNWSYAVTEFTLYAS 157 + AV F++Y S Sbjct: 151 ---TVAVDRFSIYFS 162 >UniRef50_A3CSA5 2'-5' RNA ligase n=1 Tax=Methanoculleus marisnigri JR1 RepID=A3CSA5_METMJ Length = 179 Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 46/134 (34%), Positives = 62/134 (46%), Gaps = 16/134 (11%) Query: 6 RLFFAIDLPAEIRE-----QIIHWRATHFPPEAGRPVAAD--NLHLTLAFLGEVSAEKEK 58 R F AIDLP EIRE Q I R++ GR D NLHLT+ FLGEV + Sbjct: 3 RTFVAIDLPEEIRERARESQEILRRSS------GRLAIVDPANLHLTVKFLGEVDPAQVD 56 Query: 59 ALSLLAGRIRQPGFTLTLDDA--GQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCF 116 + + F+LT+ A + RV+W + + LA + + A G Sbjct: 57 PVVEALRAVHADPFSLTVGYAVCNPPRKPRVIWCDVTDGGESAV-LARQVDALLAPLGFP 115 Query: 117 QSNRPFHPHITLLR 130 + RPF PH+TL R Sbjct: 116 RETRPFRPHVTLAR 129 >UniRef50_D2B7J8 2'-5' RNA ligase n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B7J8_STRRD Length = 190 Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 47/141 (33%), Positives = 69/141 (48%), Gaps = 13/141 (9%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAG-RPVAADNLHLTLAFLGEVSAEKEKALSLL 63 RLF + LP +R+++ H H G R + H+TL+FLGEV E L L Sbjct: 1 MRLFVGLPLPQRVRDELGHALEPHRAAWPGLRWPDPETWHVTLSFLGEV---PETVLPEL 57 Query: 64 AGRI-----RQPGFTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGC 115 R+ R TL L AG + R+RV W +R L++LA+ L + A R+G Sbjct: 58 ETRLARAASRYAPMTLLLTGAGAFPSARRARVFWTDVRGCRPRLVRLADSLGAGALRAGA 117 Query: 116 FQSN-RPFHPHITLLRDASEA 135 ++ R PH+TL R ++A Sbjct: 118 VHADRRRLRPHLTLARSRADA 138 >UniRef50_A4EPW8 2'-5' RNA ligase n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EPW8_9RHOB Length = 200 Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 6/131 (4%) Query: 2 SEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALS 61 +EP R+F A+ LP +R+ + T AGR V A+N H+TLAFLGE S + L Sbjct: 11 AEPVRVFLALPLPEALRDDLEDLALTL---RAGRLVPAENYHVTLAFLGEQSEADLERLH 67 Query: 62 LLAGRIRQPGFTLTLD--DAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 + ++ F+L ++ +A RV+W + P L L +R + Sbjct: 68 VELQKLSSAPFSLQIEGLEAPGSKAPRVLWAKLASNPE-LTALHKAIRGRLRLCDMDLPR 126 Query: 120 RPFHPHITLLR 130 F PHITL R Sbjct: 127 ERFRPHITLAR 137 >UniRef50_B3E0C6 2'-5' RNA ligase n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3E0C6_METI4 Length = 196 Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 8/133 (6%) Query: 5 QRLFFAIDLPAEIREQII-HWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEK-EKALSL 62 +R FFA P R+ ++ R F R + + LHLT+ FLG S E+ + Sbjct: 9 ERFFFAF-WPDSQRQSLLGRLREELFAGIQARAIPPEFLHLTVLFLGWTSPRSIEEIVKE 67 Query: 63 LAGRIRQPGFTLTLDDAGQWLRSR----VVWL-GMRQPPRGLIQLANMLRSQAARSGCFQ 117 L GR++ GF L + + R ++WL +R PP L ++++ + FQ Sbjct: 68 LPGRLKTEGFPLFFQFSKAVFKRRGKEGIIWLEAVRVPPPAERLLQDLIQLMTQKKLSFQ 127 Query: 118 SNRPFHPHITLLR 130 ++ PF PHIT+ R Sbjct: 128 AHSPFVPHITIFR 140 >UniRef50_A9FR36 Putative uncharacterized protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FR36_SORC5 Length = 195 Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 52/186 (27%), Positives = 84/186 (45%), Gaps = 19/186 (10%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFP--PEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 R+F A+D AE+ ++ P P A + V LH+TLAF+GE+ E+ + Sbjct: 2 RVFVAVDPGAELLAKVGDLLREISPRAPSA-KWVEPAGLHITLAFMGEIGEERLPLVIAA 60 Query: 64 AGRI---RQPGFTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLA-NMLRSQAARSGCF 116 AG + +P TL ++ G + R RV+WLG+ L + ++ ++ + +G Sbjct: 61 AGSVAAFHRP-LTLRIEKGGAFGTRRRPRVLWLGVGGAVGALTAIHRDLEQTLSMSTGYV 119 Query: 117 QSNRPFHPHITLLRD-------ASEAVTIPPPGFNWSYA-VTEFTLYASSFARGRTRYTP 168 +RPF PH+TL R A +A ++ + E +Y S RYT Sbjct: 120 PEDRPFEPHLTLARSRDPRGDPALDACAQAVGSVDFGETRIEEIIVYQSELTPKGARYTA 179 Query: 169 LKRWAL 174 L R L Sbjct: 180 LARVPL 185 >UniRef50_Q74MW1 NEQ502 n=1 Tax=Nanoarchaeum equitans RepID=Q74MW1_NANEQ Length = 172 Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 44/166 (26%), Positives = 71/166 (42%), Gaps = 27/166 (16%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEV-----SAEKEKAL 60 R+F AIDLP E++ QI + G+ V +NLH+TL F+GEV E+ + Sbjct: 2 RVFLAIDLPEELKNQIYSYYKKVSKAVYGKFVEKENLHITLKFIGEVLDINPLIERLNYV 61 Query: 61 SLLAGRIRQPGFTL--TLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQS 118 ++ G + ++++ RVVW+G N L +Q R +S Sbjct: 62 KFKPFEVKVKGLSAFPSIENP------RVVWVGAHSV------YLNDLANQINR--VLKS 107 Query: 119 NRPFHPHITLLR-----DASEAVTIPPP-GFNWSYAVTEFTLYASS 158 F HIT++R D + + + + V F LY S+ Sbjct: 108 YENFVGHITIVRVKRVLDKKYLLELAKKFDLEYKFVVDRFYLYKST 153 >UniRef50_B0K2A3 2'-5' RNA ligase n=9 Tax=Thermoanaerobacter RepID=B0K2A3_THEPX Length = 182 Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 41/148 (27%), Positives = 64/148 (43%), Gaps = 14/148 (9%) Query: 34 GRPVAADNLHLTLAFLGEVSAE---KEKALSLLAGRIRQPGFTLTLDDAGQWLRS---RV 87 GR DN H+TL FLGE+ E K K +A + P F + D G + + RV Sbjct: 31 GRWTHKDNFHITLKFLGEIETESVMKIKDSLEVAVKDISP-FYIKFDKVGFFKGNGDMRV 89 Query: 88 VWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPHITLLRDASEAVTIPPPGFNW-- 145 +W+G + L +L + + + + G + R F HIT+ RD ++ I + Sbjct: 90 LWVGTEENS-FLNKLHDNIDEELYKIGFEKDKRKFTSHITIARDIRLSIDIEEVNSLFEK 148 Query: 146 ----SYAVTEFTLYASSFARGRTRYTPL 169 + V LY S R +Y P+ Sbjct: 149 QEKGAILVDTVFLYESVIQENRRKYIPI 176 >UniRef50_A8G077 2'-5' RNA ligase n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8G077_SHESH Length = 224 Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 55/180 (30%), Positives = 74/180 (41%), Gaps = 30/180 (16%) Query: 26 ATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL-----SLLAGRIRQ-PGFTLTLDDA 79 +H GR V N H+TLAFLG VS E + L S A Q P F +TLD Sbjct: 45 GSHQYTCVGRRVNKQNFHMTLAFLGAVSDEMQAQLESTLDSFYAINASQWPSFDVTLDTL 104 Query: 80 GQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCF--QSNR-------PFHPHITLLR 130 W + +V+ L + L + R A +G F ++N+ F PHITL R Sbjct: 105 TLWRKPQVLCLSGKADDPNLQIAVDRCRYAAKEAGLFSGKTNKTKTSDELTFTPHITLFR 164 Query: 131 DASE--AVTIPPPGFNWSYAVT-----------EFTLYAS-SFARGRTRYTPLKRWALTQ 176 A +P G S + + LY S S A+G Y L+ WAL + Sbjct: 165 KAKRIPEDHLPQTGLLQSELMEKSLIPVTLSPQQMHLYESLSTAKG-VEYRILRSWALVK 223 >UniRef50_A4TU26 2',5' RNA ligase n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TU26_9PROT Length = 177 Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 47/152 (30%), Positives = 62/152 (40%), Gaps = 13/152 (8%) Query: 35 RPVAADNLHLTLAFLGEVSAEKEKALSLLAGRIRQPGFTLTLDDAGQW--LRSRVVWLGM 92 R +AA NLH+TL F+GEV + L I P F + LD G + + R +W G+ Sbjct: 29 RWLAARNLHVTLRFIGEVDEGVAEDLHQRLHDIHGPAFDVRLDGFGTFGGRKPRALWAGV 88 Query: 93 RQPPRGLIQLANMLRSQAARSGCFQSNRPFHPHITLL--------RDASEAVTIPPPGFN 144 P L L + + A G +R F PH+TL R A+ P F Sbjct: 89 AAHPE-LDSLQSRIEQAARDVGLEAESRKFTPHVTLAWLKAAPPERIAAFVAHHSP--FT 145 Query: 145 WSYAVTEFTLYASSFARGRTRYTPLKRWALTQ 176 VT FTLY S Y L + L Sbjct: 146 ALLPVTGFTLYRSHLGGEGAEYEALAEYFLDH 177 >UniRef50_B5IAZ8 2'-5' RNA ligase n=2 Tax=Aciduliprofundum boonei T469 RepID=B5IAZ8_9EURY Length = 176 Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 43/180 (23%), Positives = 80/180 (44%), Gaps = 34/180 (18%) Query: 6 RLFFAIDLP--AEIRE--QIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALS 61 R F AI++P EI E + I RA + V +N+H+TL FLGE+ + + Sbjct: 7 RTFIAIEIPFFKEIEELQKSIEGRA--------KLVEGENMHITLKFLGEIEEKLVDEIK 58 Query: 62 LLAGRIRQPGFTLTLDDAGQWLRS---RVVWLGMR--QPPRGLIQLANMLRSQAARSGCF 116 + + F ++L G + RV+W+G+ +P ++++A + + ++ G F Sbjct: 59 RIVEDCKVEKFKISLQGIGFFPNERYIRVIWIGIDGYEP---IVKMAKCMDEKLSKLG-F 114 Query: 117 QSNRPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYAS-SFARGRTRYTPLKRWALT 175 + + + PH+T+ R A+T + + + F R +KR LT Sbjct: 115 EREKSYVPHLTVARAKGRV------------AITNYDRFKNLKFGEVNVREVKIKRSTLT 162 >UniRef50_A6TLD2 2'-5' RNA ligase n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TLD2_ALKMQ Length = 182 Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 13/149 (8%) Query: 32 EAGRPVAADNLHLTLAFLGEVSAEKEKAL--SLLAGRIRQPGFTLTLDDAGQWLRS--RV 87 + G+ N HLTL F+GEV + K++ ++ ++ F L +D G + + + Sbjct: 29 QKGKFTDPGNFHLTLRFIGEVGEAEIKSIKNAIEKTATKEGFFELVMDQVGSFPKKNKEI 88 Query: 88 VWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPHITLLRDASEAVTIPPPGFNWSY 147 VW+G++ L L L G + R ++PHITL R+ + P P Sbjct: 89 VWVGVKGELDRLQNLYKDLEDALEGEGFLKEGRQYNPHITLGREI--VLNRPLPSIQEEI 146 Query: 148 AVTE-------FTLYASSFARGRTRYTPL 169 V E +L S G+ Y P+ Sbjct: 147 KVMESILSVQKISLMESVRINGKLVYRPI 175 >UniRef50_A1SDD3 2'-5' RNA ligase n=2 Tax=Nocardioidaceae RepID=A1SDD3_NOCSJ Length = 188 Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 42/135 (31%), Positives = 63/135 (46%), Gaps = 8/135 (5%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 R+F A+ PAE E + + A R + LH+T+AFL EV + + L G Sbjct: 2 RMFVALVPPAEAVEHLDAFLEPRRSAAAFRWAGVEQLHVTVAFLAEVEERRLEDLVERLG 61 Query: 66 R--IRQPGFTLTLDDAGQW---LRSRVVWLGMRQPPRG---LIQLANMLRSQAARSGCFQ 117 R R+ F + G + R+RV+W G+ G L +LA R+ A R+G Sbjct: 62 RAAARRSAFDTAITGGGAFPNVGRARVLWAGLALDEHGRTQLDRLATGCRTAANRAGVPV 121 Query: 118 SNRPFHPHITLLRDA 132 + F PH+T+ R A Sbjct: 122 DGQRFRPHLTVARIA 136 >UniRef50_Q07Y05 Putative 2'-5' RNA ligase n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q07Y05_SHEFN Length = 206 Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 42/175 (24%), Positives = 74/175 (42%), Gaps = 6/175 (3%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVA--ADNLHLTLAFLGEVSAEKEKALSLL 63 RLF L ++I+H + T VA A NLH+TL F G++ + Sbjct: 33 RLFVGFSLDKPQIDKILHLQQTLITKINTNSVATLAHNLHITLGFFGQIDPTTCSKIREA 92 Query: 64 AGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 ++ + F+ +D W ++++ L Q L +AN +++ A S + Sbjct: 93 INQMPKTTFSQIIDTFAWWQTAQLICLK-GQASASLNTMANDIKNIAKTHHLAVSQYDYV 151 Query: 124 PHITLLRDASEAVTIPPPGFNWSYAV--TEFTLYASSFARGRTRYTPLKRWALTQ 176 PHI+L R + A ++P + + + LY S+ YT ++ W L Q Sbjct: 152 PHISLFRGVTTA-SLPTEVKDTQLIIAPSHLHLYQSTGRHNNVNYTIVESWPLLQ 205 >UniRef50_C5CES3 2'-5' RNA ligase n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CES3_KOSOT Length = 208 Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 7/99 (7%) Query: 37 VAADNLHLTLAFLGEVSAEKEKAL-SLLAGRIRQ-PGFTLTLDDAGQWLRS---RVVWLG 91 V N HLTL+FLGE+ K + L S+L+ R+R P FT + G + + RV+W+G Sbjct: 54 VPGSNAHLTLSFLGEIEFSKVEILASMLSKRLRGFPSFTFSTKQLGFFRHNNLPRVIWIG 113 Query: 92 MRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPHITLLR 130 + P L L +R G ++ FHPHIT+ R Sbjct: 114 VENTPF-LNNLHREVRVALGSLGLAAEDK-FHPHITVGR 150 >UniRef50_C1P948 2'-5' RNA ligase n=1 Tax=Bacillus coagulans 36D1 RepID=C1P948_BACCO Length = 189 Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 37/99 (37%), Positives = 52/99 (52%), Gaps = 6/99 (6%) Query: 37 VAADNLHLTLAFLGEVS-AEKEKALSLLAGRIRQ-PGFTLTLDDAGQWLRS---RVVWLG 91 V D+LH+TLAFLG A+ EKA L+A +I L D G + + RV++ G Sbjct: 36 VHRDDLHITLAFLGAAEEAQLEKANRLIADQIGAFHVLPLVFDHFGTFGKKDEPRVLFAG 95 Query: 92 MRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPHITLLR 130 +++ P L L M+ +G RPFHPH+TL R Sbjct: 96 IQESP-PLSDLETMVAGCCLEAGFSLDRRPFHPHMTLAR 133 >UniRef50_A5UJ81 2'-5' RNA ligase, LigT n=3 Tax=Methanobrevibacter smithii RepID=A5UJ81_METS3 Length = 185 Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 65/134 (48%), Gaps = 14/134 (10%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAG-RPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 R F AIDL + + ++ +A + V +NLH TL F G++ E + L++ Sbjct: 5 RSFLAIDLDDDFKPKVNKIIKEFKKIDANIKFVDLNNLHFTLKFFGDIDTE---GIDLIS 61 Query: 65 GRIRQPG-----FTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARSGCF 116 +I + F + + G + + +V+W+G+ + L+QL + L ++ A G F Sbjct: 62 KKIEKVADDFEPFNIKISGCGAFPNNNHIKVIWIGV-ESDELLVQLHDKLDNEFAAIG-F 119 Query: 117 QSNRPFHPHITLLR 130 ++ F H+T+ R Sbjct: 120 DKDKKFSTHLTIGR 133 >UniRef50_C1F3J7 2'-5' RNA ligase n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F3J7_ACIC5 Length = 185 Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 52/183 (28%), Positives = 79/183 (43%), Gaps = 14/183 (7%) Query: 5 QRLFFAIDLPA-EIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 +RLF I +PA E+ E + A R + H+TL F G V+ +E L Sbjct: 2 KRLFTGIAIPAAEVPELLECSEALAAQHGQLRWSERNGWHVTLQFYGMVTTAQEACLRQA 61 Query: 64 AGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 ++R +L + G + R+ V+ L QP L L + + G RP+H Sbjct: 62 LAQVRGSLSSLQIRGIGFFERAGVL-LAEVQPNADLDALQRAVVKVSRACGFLPEERPYH 120 Query: 124 PHITLLRDAS--------EAVTIPPPGF----NWSYAVTEFTLYASSFARGRTRYTPLKR 171 PH+TL R S E ++ P F + S V+EF LY S +RY ++R Sbjct: 121 PHVTLARRRSRRDQAEWQEILSRTLPHFQEHPSGSVKVSEFVLYESVPGPAGSRYEVMER 180 Query: 172 WAL 174 + L Sbjct: 181 FLL 183 >UniRef50_B0T6B2 2'-5' RNA ligase n=5 Tax=Caulobacteraceae RepID=B0T6B2_CAUSK Length = 178 Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 36/126 (28%), Positives = 56/126 (44%), Gaps = 7/126 (5%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF A+ +PAE+ + ++ E R + H+TL F+G+V + L Sbjct: 3 RLFTAVAIPAEVGDHLL---LRQHGIEGARWRPREAFHITLKFIGDVQETQAVDLDEELQ 59 Query: 66 RIRQPGFTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 + P F L L G + + VW G+ + P L +LA A R+G R + Sbjct: 60 GVEAPAFDLELQGVGHFGEGIEIHAVWAGLAESP-DLRRLAKANEGAARRAGLKPETRLY 118 Query: 123 HPHITL 128 PH+TL Sbjct: 119 TPHVTL 124 >UniRef50_A7VYB6 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VYB6_9CLOT Length = 191 Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 53/184 (28%), Positives = 78/184 (42%), Gaps = 21/184 (11%) Query: 6 RLFFAIDLPAEIREQIIH-WRATHFPPEAGRPVAADNLHLTLAFLGEV--SAEKEKALSL 62 RLF AI +++++ R +NLHLTL FLGE+ + + +A+ Sbjct: 8 RLFLAILFEEPVKDRLCEAMELIRRSTRTSRLTRRENLHLTLVFLGELREAGKVREAME- 66 Query: 63 LAGRIRQPGFTLTLDDAGQWLRS--RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 IR F L + G++ R + W G+ +P L L L++ A G +R Sbjct: 67 ---EIRTGPFPLEIRGLGRFQRDGGDLYWAGI-EPSLPLQNLYLELKNALAGKGIAVEDR 122 Query: 121 PFHPHITLLRDASEAVTIP--------PPGFNWSYAVTEFTLYASSFARGRTRYTPLKRW 172 P+ PH+TL R A E P P + AV +L S GR YT L R Sbjct: 123 PYRPHLTLARQAVEKPETPFYTLKNRLEPVKTKAAAV---SLMKSERIEGRLVYTELYRK 179 Query: 173 ALTQ 176 L + Sbjct: 180 ELRE 183 >UniRef50_A8UTL9 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UTL9_9AQUI Length = 187 Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 9/104 (8%) Query: 34 GRPVAADNLHLTLAFLGEVSAEKEKALSLLAG----RIRQPGFTLTLDDAGQW---LRSR 86 G+ V N+H+T FLG++S + +A+S+L + F + G + R R Sbjct: 30 GKWVEPQNMHMTFQFLGDIS--QSQAVSVLKNLQSIAEKHAPFKVQYRSLGVFPDRRRPR 87 Query: 87 VVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPHITLLR 130 ++W+G+ + L +LAN + ++G +PFHPH+T+ R Sbjct: 88 ILWVGVSRGENRLKRLANEVAQLNKKAGIRVDAKPFHPHVTVCR 131 >UniRef50_C0ZGV0 Putative uncharacterized protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZGV0_BREBN Length = 198 Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 49/138 (35%), Positives = 61/138 (44%), Gaps = 19/138 (13%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAAD------NLHLTLAFLGEVSAEKEKA 59 RLF A+D+PAE I + V AD NLHLTL FLGEV A Sbjct: 2 RLFIALDIPAEAAAYI-----ADVQKRLKQDVTADRWQSLANLHLTLHFLGEVDESLVPA 56 Query: 60 LSL---LAGRIRQPGFTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANML-RSQAAR 112 + + I QP TL + G + L RV+WLG+R L QL +L R Sbjct: 57 ICEDMDIVSAIIQP-MTLRVGSFGVFPNALHPRVLWLGLRGQLSPLKQLHLLLGRRFELH 115 Query: 113 SGCFQSNRPFHPHITLLR 130 G + + PHITL R Sbjct: 116 EGLSYDRKQYRPHITLAR 133 >UniRef50_A6CQH7 Putative uncharacterized protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CQH7_9BACI Length = 187 Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 25/193 (12%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRAT---HFPPEAGRPVAADNLHLTLAFLGEVSAEKE 57 M +P F+A+ LP + +E+I W + P + R V ++LH+TLAFLG A Sbjct: 2 MKQPH-YFYAVPLPWQTQEKIEEWISEVSGTLPFQ--RWVHPEDLHITLAFLGGTDA--- 55 Query: 58 KALSLLAGRIRQ--PGFTLTLD-----DAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQA 110 +L RI + GF+ +L+ G R++W + L +L + + S Sbjct: 56 NSLKRSIDRIHELRKGFSFSLEIKKLGTFGNTASPRILWTDVSSS-SSLSELRDSVYSAC 114 Query: 111 ARSGCFQSNRPFHPHITLLR----DASEAVTIPPPGF---NWSYAVTEFTLYASSFARGR 163 + G RPF+PHIT+ R D ++ P F + V+EF LY + R Sbjct: 115 LQEGYELDKRPFNPHITIARKWKGDGKFNYSMLEPFFLSEPLDFRVSEFVLYRTHPDR-L 173 Query: 164 TRYTPLKRWALTQ 176 +Y ++++ L Q Sbjct: 174 PKYEVVEKFILNQ 186 >UniRef50_B1I1T7 2'-5' RNA ligase n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I1T7_DESAP Length = 195 Score = 48.5 bits (114), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 46/136 (33%), Positives = 75/136 (55%), Gaps = 10/136 (7%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRAT--HFPPEAGRPVAADNLHLTLAFLGEVSAEKEK 58 MSE RLF+A++LP ++ ++ +A + P + + V +NLHLT+ FLGEV + + Sbjct: 1 MSE-LRLFWAVNLPGGLKAELGRLQAELQNLPVDL-KWVEQENLHLTVKFLGEVDSSRVS 58 Query: 59 ALS-LLAGRIRQ--PGFTLTLDDAGQWLR-SRVVWLGMRQPPRGLIQLANMLRSQAARSG 114 AL+ ++G + P F+L L G + R RV+W+G+ L +L + A G Sbjct: 59 ALTRAVSGSVSGLVP-FSLELTGWGTFGRPPRVLWIGVGGAVEKLQELWVRVDRALAPLG 117 Query: 115 CFQSNRPFHPHITLLR 130 F + + F PH+TL R Sbjct: 118 -FPAEKSFSPHLTLGR 132 >UniRef50_C0GSW7 2'-5' RNA ligase n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GSW7_9DELT Length = 189 Score = 48.5 bits (114), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 40/134 (29%), Positives = 59/134 (44%), Gaps = 13/134 (9%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVA---ADNLHLTLAFLGEVSAEKEKALSL 62 R+FF I LP E+ +Q++ + ++ N H+TL FLGEV + + + Sbjct: 2 RIFFGIPLP-EVYQQMLGQARNEWKKRFRSRLSWTRPGNWHITLRFLGEVQDDLLPQVKV 60 Query: 63 LAGRIRQPGFTLT------LDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCF 116 R+ F L AGQ+ RV WLG+ + L+ LA L + G Sbjct: 61 CLDRVEFEDFCLQGSKSGYFGSAGQY---RVAWLGVDGEVQKLMNLARTLEKELEGFGFE 117 Query: 117 QSNRPFHPHITLLR 130 RPF H+TL R Sbjct: 118 PEKRPFKAHLTLAR 131 >UniRef50_A8V0J3 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V0J3_9AQUI Length = 180 Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 5/103 (4%) Query: 33 AGRPVAADNLHLTLAFLGEVSAEKEKALSLLAGRI--RQPGFTLTLDDAGQW--LRS-RV 87 GR NLH+T FLG S EK + L I R LT + L+S +V Sbjct: 31 KGRWTKNRNLHITYKFLGNTSDEKISEVKLKLKDILNRSINVNLTFQGISAFPNLKSPKV 90 Query: 88 VWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPHITLLR 130 V++ ++ L + N + + + G + N+PF PHIT+ R Sbjct: 91 VFIKVKDKDNVLTDIHNQINEKLSLIGFEKDNKPFIPHITIKR 133 >UniRef50_B8FL01 2'-5' RNA ligase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FL01_DESAA Length = 192 Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 14/140 (10%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRP---VAADNLHLTLAFLGEV-SAEK 56 M+ R F A+++P E+++ + RA +G P V +HLTL FLG+V ++ Sbjct: 1 MTRKLRTFIAVEIPEEVKQAV--SRAQGGFKASGLPFRWVNPKGMHLTLKFLGDVLQSDI 58 Query: 57 EKALSLLAGRIRQPGF---TLTLDDAG---QWLRSRVVWLGMRQPPRGLIQLANMLRSQA 110 + + ++ + GF T T G + ++RV+W G+ GL +LA+ L Sbjct: 59 DGVVQVM--KECTAGFAPMTFTAKGFGAFPNFSKARVLWTGLAGDAAGLAKLASCLEQGL 116 Query: 111 ARSGCFQSNRPFHPHITLLR 130 G N+ F HITL R Sbjct: 117 EPLGFEAENKRFSAHITLGR 136 >UniRef50_Q6AKT9 Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6AKT9_DESPS Length = 172 Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 50/178 (28%), Positives = 73/178 (41%), Gaps = 19/178 (10%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVS-AEKEKALSLLA 64 RLF AI LP ++ + + ++ P LHLTL FLG+V AE E A+S Sbjct: 2 RLFLAIALPRDVEKVLRSYQ----PTSEAYIRIVSQLHLTLHFLGDVKLAELETAMS--- 54 Query: 65 GRIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 IR F L+LD G + + R +W G+R P L QL + + + + Sbjct: 55 -DIRFKEFKLSLDGLGCFKANGKCRTLWAGVR-PNEALRQLYVRIGKRLEEADFELYSHH 112 Query: 122 FHPHITLLRDASEAVTIPPPGFN------WSYAVTEFTLYASSFARGRTRYTPLKRWA 173 + PHI+L R + F + V F LY S Y L ++ Sbjct: 113 YSPHISLARCQRKYSEEKIQHFLQIRTEPLEFRVDHFLLYGSEIINNVPFYRALAKYG 170 >UniRef50_A6AKQ4 2'-5' RNA ligase n=3 Tax=Vibrio harveyi RepID=A6AKQ4_VIBHA Length = 173 Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 6/129 (4%) Query: 6 RLFFAI--DLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 RLFFA+ D ++ + + I + GR +N H+TLAF+GE + E+ + L+ + Sbjct: 2 RLFFALTFDKTSKSKLKQIQEKLKQHGI-VGRYTRKENFHITLAFIGESTQEEFEQLTKI 60 Query: 64 AGRIRQPGFTLTLDDAGQWLRS--RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 ++ +T+D G + +S ++ WLG+ + + L L + G R Sbjct: 61 LHNLKSSCKHITVDHLGSFYQSGRQLAWLGI-EDNHAVTNLQTELIEALEQDGFATELRH 119 Query: 122 FHPHITLLR 130 + PHITL R Sbjct: 120 YVPHITLAR 128 >UniRef50_B2A6J9 2'-5' RNA ligase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A6J9_NATTJ Length = 186 Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 45/155 (29%), Positives = 62/155 (40%), Gaps = 12/155 (7%) Query: 33 AGRPVAADNLHLTLAFLGEVSAEKEKALSLLAGRIRQ-PGFTLTLDDAGQW---LRSRVV 88 G+ V DN+HLT+ FLG+V L LL + Q L L G + R RV+ Sbjct: 30 KGKYVKPDNIHLTVKFLGDVEQNALDKLQLLDQELEQIEPLKLRLSHLGVFPGKGRPRVL 89 Query: 89 WLGMR-QPPRGLIQLANMLRSQAARS-GCFQSNRPFHPHITLLR--DASEAVTIPPPGFN 144 W G+ + L Q+ + R Q + F PH+TLLR D + V+I Sbjct: 90 WQGLSGDDIKDLQQIHQEVEQFTERELKIAQEKKKFRPHVTLLRNPDIPKGVSIDQISKE 149 Query: 145 W----SYAVTEFTLYASSFARGRTRYTPLKRWALT 175 V +L S YT LKR+ Sbjct: 150 ELERPEILVDSISLIKSELTPKGPIYTELKRFVFN 184 >UniRef50_Q7UM43 Putative uncharacterized protein n=1 Tax=Rhodopirellula baltica RepID=Q7UM43_RHOBA Length = 189 Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 43/134 (32%), Positives = 60/134 (44%), Gaps = 6/134 (4%) Query: 6 RLFFAIDLPAEIREQIIHWRA-THFPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL--SL 62 R F AI LP+++ W A T P + + V +NLHLTL FLGEV + A+ +L Sbjct: 5 RTFLAIPLPSDLARTASRWMAETKSPGDGIKWVPDENLHLTLKFLGEVDNVETPAVCNTL 64 Query: 63 LAGRIRQPGFTLTLDDAG---QWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 A F L L+ A R RV+ + + L L L + A G Sbjct: 65 QAACEDIEPFALVLEGASGIPDLERPRVLTVAVDDATSTLTNLVADLEKRFAAMGYKPEP 124 Query: 120 RPFHPHITLLRDAS 133 R + PH+T+ R S Sbjct: 125 RDYRPHLTVGRTRS 138 >UniRef50_Q1ARL5 2',5' RNA ligase n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ARL5_RUBXD Length = 180 Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 49/133 (36%), Positives = 70/133 (52%), Gaps = 12/133 (9%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAG-RPVAADNLHLTLAFLGEVSAEK----EKAL 60 R F AI P E+RE + RA P G R V +N+HLTL FLGE+S E+ AL Sbjct: 2 RAFVAILPPPEVREAL--SRAARSLPVIGVRWVRPENIHLTLKFLGEISEEQAPQIASAL 59 Query: 61 SLLAGRIRQPGFTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQ 117 + +A R+R+P F + + G + R+RV+W G+ + L +LA + G + Sbjct: 60 AQVA-RLRRP-FRIEPEGLGAFPSPERARVLWAGVGEGSASLEELAAAVEEALFPLGFGR 117 Query: 118 SNRPFHPHITLLR 130 RPF H+TL R Sbjct: 118 EQRPFRAHLTLGR 130 >UniRef50_D0LIM3 2'-5' RNA ligase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LIM3_HALO1 Length = 298 Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 36/95 (37%), Positives = 47/95 (49%), Gaps = 5/95 (5%) Query: 41 NLHLTLAFLGEVSAEKEKAL-SLLAGRIRQPG-FTLTLDDAGQW---LRSRVVWLGMRQP 95 N HLTL FLG E AL LA I + G F L G + ++RV+W G+ Sbjct: 49 NYHLTLKFLGWTPPEAVTALRDALAAPIAEVGRFDLIGRGLGAFPEPAQARVLWAGIDDA 108 Query: 96 PRGLIQLANMLRSQAARSGCFQSNRPFHPHITLLR 130 GL +LA +L R G + R +HPH+TL R Sbjct: 109 TGGLAELARVLDDACHRLGFAREARAYHPHLTLGR 143 >UniRef50_B9JCJ4 2'-5' RNA ligase n=44 Tax=Rhizobiales RepID=B9JCJ4_AGRRK Length = 213 Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 39/133 (29%), Positives = 57/133 (42%), Gaps = 6/133 (4%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF A+++P + R P R + +N H+TL F+G+V + Sbjct: 18 RLFTALEIPRNAAMSLSLLRGG-LP--GARWIDVENYHITLRFIGDVDGRTADEIVDRLD 74 Query: 66 RIRQPGFTLTLDDAGQW--LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 RI +P F L L+ G + + VW G+ Q P + L + R G R F Sbjct: 75 RIDRPEFQLRLEGIGSFGSKKPHSVWAGVTQTP-DMYALQGEIERICQRIGLPPDPRKFT 133 Query: 124 PHITLLRDASEAV 136 PH+TL R S V Sbjct: 134 PHVTLARLKSSRV 146 >UniRef50_Q12W73 2'-5' RNA ligase n=4 Tax=Methanosarcinaceae RepID=Q12W73_METBU Length = 183 Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 40/128 (31%), Positives = 62/128 (48%), Gaps = 7/128 (5%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF A+DLP+ IR ++I + F + V+ + +H+TL FLGEVS + ++ Sbjct: 3 RLFIAVDLPSSIRRELIDVLSL-FEGFKLKIVSPELIHITLKFLGEVSDDMVPDIASSLD 61 Query: 66 RIRQPGFTLTLDDAGQW--LRS-RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 I F + G + LRS RVVWLG + +L + + ++ + R F Sbjct: 62 GIECMPFNANIKGVGVFSNLRSPRVVWLGAEGNFK---KLHEEVETSLSKLRFDKDKREF 118 Query: 123 HPHITLLR 130 H TL R Sbjct: 119 AAHATLAR 126 >UniRef50_A7NPU2 2'-5' RNA ligase n=2 Tax=Roseiflexus RepID=A7NPU2_ROSCS Length = 201 Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 44/138 (31%), Positives = 67/138 (48%), Gaps = 11/138 (7%) Query: 6 RLFFAIDLPAEIREQ--IIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL--S 61 RLF A++LP +RE+ ++ R P R V + +HLTL FLG+VS ++ L + Sbjct: 7 RLFIAVELPNALREELTVLQQRLKRDQPPV-RWVEPNAMHLTLWFLGDVSGDQVAHLRVA 65 Query: 62 LLAGRIRQPGFTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQS 118 L+ Q + L G + R +V+W+G+ + L + L + G Sbjct: 66 LMLAFAGQQAVRVQLGAPGAFPNLQRPQVIWIGLAEGEMHLRVWYDALARRLPSLGFQPD 125 Query: 119 NRPFHPHITL---LRDAS 133 RPF PH+TL RDAS Sbjct: 126 PRPFRPHLTLGRVRRDAS 143 >UniRef50_C4RLS5 2'-5' RNA ligase n=2 Tax=Micromonospora RepID=C4RLS5_9ACTO Length = 217 Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 35/97 (36%), Positives = 45/97 (46%), Gaps = 9/97 (9%) Query: 43 HLTLAFLGEVSAEK----EKALSLLA-----GRIRQPGFTLTLDDAGQWLRSRVVWLGMR 93 HLT+AFLG V + E AL L A GR QP L + RS V+W+ +R Sbjct: 70 HLTVAFLGTVDTGRLVKVESALGLAAETFRGGRSAQPVLRLGGGGSFGQGRSTVLWVDVR 129 Query: 94 QPPRGLIQLANMLRSQAARSGCFQSNRPFHPHITLLR 130 L L ++RS R RPF PH+T+ R Sbjct: 130 GEVEALRVLGRLVRSGLRRGRLPCDERPFTPHLTVAR 166 >UniRef50_B6JCZ3 2'-5' RNA ligase n=13 Tax=Alphaproteobacteria RepID=B6JCZ3_OLICO Length = 192 Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 81/181 (44%), Gaps = 17/181 (9%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF +++P +I + + R P GR V +N H+TL F+G++ + + ++ Sbjct: 3 RLFTGLEIPPDISQSLSMLRGG-LP--GGRWVDPENYHVTLRFIGDIDDDVAREIAGSLE 59 Query: 66 RIRQPGFTLTLDD----AGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 RI + F +TL G+ R+ V + P R L++L R G R Sbjct: 60 RIDRQPFEVTLQGLSSFGGKKPRAVVACVA---PTRPLMELQAEHERLMRRFGLEPEGRK 116 Query: 122 FHPHITL--LRDASE---AVTIPPPGF--NWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 F PH+TL LRDAS A + G+ + + F L++S + G Y + L Sbjct: 117 FIPHVTLARLRDASSRDVADYLSVRGYFPAKRFVASRFVLFSSRASVGGGPYVVEDSYGL 176 Query: 175 T 175 + Sbjct: 177 S 177 >UniRef50_D0MJ05 2'-5' RNA ligase n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MJ05_RHOM4 Length = 179 Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 54/179 (30%), Positives = 70/179 (39%), Gaps = 14/179 (7%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF A+DLP + R ++ R P R D HLTL FLG V + L+ Sbjct: 3 RLFVALDLPEDHRRRLYALRD---PSWKARWATPDQFHLTLRFLGPVEEDLLPELTRTLA 59 Query: 66 RIRQPGFTLT---LDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 I P F L L R RV+ + P L L + + G +RPF Sbjct: 60 EIEAPAFELAPRGLMVLPSLTRPRVLAAAV-DPVPELHALQAEIERRVVDLGFTPEDRPF 118 Query: 123 HPHITL--LRDASEAVTIPPPGFNWSYAVTEFT-----LYASSFARGRTRYTPLKRWAL 174 PHITL L+ A + +A+T F LY S RY L R+ L Sbjct: 119 RPHITLARLKQVPTAAVRSFLQRHRDFALTPFPVRAFHLYESHLHPDGARYEILHRFPL 177 >UniRef50_B5Y8R2 2'-5' RNA ligase n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y8R2_COPPD Length = 174 Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 52/178 (29%), Positives = 78/178 (43%), Gaps = 15/178 (8%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPE-AGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 RLFF I + E+R I E G+ V +NLH+T+ FLGEV EK L+ + Sbjct: 1 MRLFFGIPVSEEVRAFYIETLKPQLEAEFIGKFVETENLHITMLFLGEV--EKVDFLNEV 58 Query: 64 AGRIRQ-PGFTLTLDDAGQWLR-SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 ++ F +T+ G + R RV+++ + RG+ L ++ RS + R Sbjct: 59 KENLKAITHFQVTVGGYGYFGRPPRVLFMDV---TRGIDDL-TVVHDAICRSMKIRDTR- 113 Query: 122 FHPHITLLRDAS-----EAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 F PH+TL R +AV P +S+ V LY S YT + L Sbjct: 114 FAPHVTLARIKKSPRDIDAVLELMPHKEFSWLVPSVVLYESKLTSKGPIYTVFEEIRL 171 >UniRef50_Q0FJZ2 2'-5' RNA ligase n=2 Tax=Rhodobacteraceae RepID=Q0FJZ2_9RHOB Length = 186 Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 36/99 (36%), Positives = 47/99 (47%), Gaps = 3/99 (3%) Query: 34 GRPVAADNLHLTLAFLGEVSAEKEKALSLLAGRIRQPGFTLTLDDAGQWLRSRVVWLG-- 91 GR V DNLHLTLAFLG+ + + L L+ G+ P TL L + RV L Sbjct: 27 GRAVPEDNLHLTLAFLGDRPEAELRELHLVLGQRALPAVTLALSGLATFGGRRVKLLAAE 86 Query: 92 MRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPHITLLR 130 + + P L+ L A +G F PH+TLLR Sbjct: 87 VTKVP-ALVALQREAVRAATAAGMALPRERFRPHVTLLR 124 >UniRef50_C7Q269 2'-5' RNA ligase n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q269_CATAD Length = 215 Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 3/90 (3%) Query: 43 HLTLAFLGEVSAEKEKALSLLAGRI--RQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLI 100 H+T+AF GEVS +K L GR+ R L+L AG++ R +W G++ L Sbjct: 45 HITVAFYGEVSEDKAADLVDRLGRVAARTTPMELSLAGAGRF-GPRALWFGVQGQCDRLG 103 Query: 101 QLANMLRSQAARSGCFQSNRPFHPHITLLR 130 +LA + A R +RP+ PH+TL R Sbjct: 104 RLAESAGAAARRCHIRVEDRPYRPHLTLAR 133 >UniRef50_A8VWN7 2'-5' RNA ligase n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VWN7_9BACI Length = 186 Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 39/125 (31%), Positives = 63/125 (50%), Gaps = 14/125 (11%) Query: 35 RPVAADNLHLTLAFLGEVSAEKEKAL--SLLAGRIR--QPGFTLT---LDDAGQWLRSRV 87 R + D+LHLTLAFLG + + + AL +R QP FTL +D G RV Sbjct: 34 RLMHPDDLHLTLAFLG-ATPDTDAALLWEDFKQHVRGFQP-FTLCFDRIDGFGHPDHPRV 91 Query: 88 VWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPHITLLRDASEAVTIPPPGFNWSY 147 ++L + P L ++ ++ + +G S +PFHPH+TL++ T+ F+ Y Sbjct: 92 LYLSPK-PSESLTKIKHLTDAHIQAAGLHVSYKPFHPHVTLMKKWQGNETV----FDKGY 146 Query: 148 AVTEF 152 ++ F Sbjct: 147 SLPVF 151 >UniRef50_A0LR27 2'-5' RNA ligase n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LR27_ACIC1 Length = 190 Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 38/105 (36%), Positives = 52/105 (49%), Gaps = 9/105 (8%) Query: 35 RPVAADNLHLTLAFLGEVSAEKEKALSLLAGRI--RQPGFTLTLDDAGQW---LRSRVVW 89 R V D HLTLAF GEVS ++L R+ RQ L G + R+RV+W Sbjct: 32 RWVLPDRWHLTLAFYGEVSEFTADRVALRLERVAGRQAPLQLCFAGVGAFDRPSRARVIW 91 Query: 90 LGMRQ--PPRGLIQLANMLRSQAARSGCF--QSNRPFHPHITLLR 130 G+R L +LA+ R+ R+G Q++R F H+TL R Sbjct: 92 AGVRTIADDGSLARLADRCRAAGRRAGVTMPQTDRGFRAHLTLAR 136 >UniRef50_UPI0001C31E9E 2''''-5'''' RNA ligase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31E9E Length = 209 Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 58/202 (28%), Positives = 76/202 (37%), Gaps = 34/202 (16%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAG--RPVAADNLHLTLAFLGEVS-AEKEKALSL 62 RLF A+DLPAE+R+ ++ WRA G R V LH+TL FLG + A E Sbjct: 8 RLFVALDLPAEVRDALVAWRAPVLAAAEGGLRAVDPAALHVTLCFLGSLPLASVEPVGEA 67 Query: 63 LAGRIRQ------------------PGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQ 101 + G I L L D G WL R RV+ + + L Sbjct: 68 VMGAIGSVGGAAGPHGGAPVPGVDVGVGGLALGD-GLWLPRRRPRVLTVALEDGDGALAA 126 Query: 102 LANMLRSQAARSGCFQSN-RPFHPHITLLRDASEAVTIP--------PPGFNWSYAVTEF 152 + + G F R + PH+T+ R P ++A Sbjct: 127 VQAAVADALTAGGWFAPEPRRYLPHVTVARVRERRPAAAAALTRAPLPATPALAFAGVAV 186 Query: 153 TLYASSFARGRTRYTPLKRWAL 174 TLY S G RY PL R AL Sbjct: 187 TLYRSLLGGGPARYEPLVRVAL 208 >UniRef50_O57823 UPF0097 protein PH0099 n=10 Tax=Euryarchaeota RepID=Y099_PYRHO Length = 184 Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 64/131 (48%), Gaps = 8/131 (6%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAG-RPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 R F AID+ +R+ ++ + EA + V +NLH+TL FLGE++ E+ + + + Sbjct: 2 RAFIAIDVNESVRDSLVRAQDYIGSKEAKIKFVERENLHITLKFLGEITEEQAEEIKNIL 61 Query: 65 GRIRQPGFTLTLDDAGQWL-----RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 +I + + G + RV+W G+ + + ++A + + A+ G F+ Sbjct: 62 KKIAEKYKKHEVKVKGIGVFPNPNYIRVIWAGI-ENDEIIREMAREIEDELAKLG-FKKE 119 Query: 120 RPFHPHITLLR 130 F HITL R Sbjct: 120 GNFVAHITLGR 130 >UniRef50_D2LR69 2'-5' RNA ligase n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LR69_BACS4 Length = 178 Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 39/116 (33%), Positives = 54/116 (46%), Gaps = 13/116 (11%) Query: 35 RPVAADNLHLTLAFLGEVSAEKEKAL-SLLAGRIRQPGFTLTLDDAGQWLRS---RVVWL 90 + V+ ++ HLTL FLG EK L L + Q F+LTL+ G + + RV+W Sbjct: 35 KVVSKEDFHLTLLFLG--GWEKTHTLWERLKMTLTQRTFSLTLNSIGYFGKEAEPRVIWG 92 Query: 91 GMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPHITLLRDASEAVTIPPPGFNWS 146 G+ Q L L + A SG RPF PHIT+ A ++ FN S Sbjct: 93 GVAQSD-ALFNLHKNIICLAQESGFPLEKRPFKPHITI------AKSLKASSFNQS 141 >UniRef50_Q0F3T5 2`-5` RNA ligase, putative n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F3T5_9PROT Length = 198 Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 53/186 (28%), Positives = 73/186 (39%), Gaps = 21/186 (11%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFP---PEAGRPVAADNLHLTLAFLGEVSAEKEKALS- 61 RLF A+++P I+ +I W +P P+ R V H+TLAF G+VS L+ Sbjct: 5 RLFAALEVPEAIKYEINAWWQLAYPRLGPDLWRAVLPHQWHMTLAFYGDVSGRDADDLAE 64 Query: 62 -LLAGRIRQPGFTLTLDDAG---QWLRSRVVWLGMR--QPPRGLIQLANMLRSQAARSGC 115 L P L L G Q R R W G+ L LA R + Sbjct: 65 MLAVCADASPRLHLCLTGCGIFPQASRPRTFWAGVESLSADPALKHLARCCRRAGHVTVR 124 Query: 116 FQSNR--PFHPHITLLRDAS------EAVTIPP-PGFNWSYAVTEFTLYASSFARGRTRY 166 ++ R PF HITL R + +PP P NW L+ S +Y Sbjct: 125 NRTAREAPFRAHITLARANGHLPALLDLQALPPVPELNWQ--ADHLCLFQSILHADGAQY 182 Query: 167 TPLKRW 172 L+R+ Sbjct: 183 RQLERF 188 >UniRef50_Q2S292 2'-5' RNA ligase n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S292_SALRD Length = 179 Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 56/192 (29%), Positives = 77/192 (40%), Gaps = 37/192 (19%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADN-------LHLTLAFLGEVSAEK-- 56 RLF AIDLP R ++ +A P A D H+TL F+G+ S E+ Sbjct: 2 RLFTAIDLPDGFRNEVADLQA---------PSALDTRWTDPAQFHVTLRFIGDASPERAA 52 Query: 57 --EKALSLL---AGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAA 111 E+AL+ L A R G LD RV+ LG+ + L+ L + Sbjct: 53 RYEQALADLTAPAARCEPYG----LDVLPSRRSPRVLVLGLERT-ESLLALHTAVGDALE 107 Query: 112 RSGCFQSNRPFHPHITLLR---DASEAV-----TIPPPGFNWSYAVTEFTLYASSFARGR 163 R G +R + PH+TL R A E V T P F ++ F LY S+ Sbjct: 108 REGLSPDDRDYTPHVTLARVGDTAPETVHAFLRTADVPSFP-AFQADRFVLYESTLTSDG 166 Query: 164 TRYTPLKRWALT 175 Y P + L Sbjct: 167 AVYDPRAIYPLN 178 >UniRef50_B4X1Z9 2'-5' RNA ligase n=2 Tax=Alcanivorax RepID=B4X1Z9_9GAMM Length = 171 Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 48/175 (27%), Positives = 69/175 (39%), Gaps = 15/175 (8%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 R F I + + +Q + + GR NLHLTLAFLGE + + ALS L G Sbjct: 2 RCFIGIPVTDALADQCVTLSHS-----MGRATPIANLHLTLAFLGE---QTQSALSQLHG 53 Query: 66 RIRQ-----PGFTLTLDDAGQWLRSRVVWLGMRQPPR-GLIQLANMLRSQAARSGCFQSN 119 + + P F L+ + + + ++ + L QL + L G Sbjct: 54 SLTELAGENPPFQQLLNRCEPFPQEQGPFMALTGAACPALKQLHHDLWLCLQGYGFSPEE 113 Query: 120 RPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 RPF PHITL + G +W V LY S Y PL ++ L Sbjct: 114 RPFRPHITLAKPGLTQTPFKAIG-DWVLPVNTLVLYRSELGEPFPSYEPLAQFPL 167 >UniRef50_C6BS46 2'-5' RNA ligase n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BS46_DESAD Length = 184 Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 10/146 (6%) Query: 37 VAADNLHLTLAFLGEVSAEKEKALSLLAGRIRQPGFTLTLDDAGQW---LRSRVVWLGMR 93 V +N+H TL FLG + K + + I F ++ AG + + V+W+G+ Sbjct: 38 VKPENMHFTLKFLGPIEESKLAEVQEVLKNIPVVNFKISTAGAGFFPALEKPHVIWIGLE 97 Query: 94 QPPRGLIQLANMLRSQAARSGCFQSNRPFHPHITLLR---DASEAVTIPPPGFNW----S 146 Q + A + S+ A+ ++ + H H+TL R A + T+ N Sbjct: 98 QGAKEFCSTAATIESEMAKLDFKENRKSCHAHLTLGRVKKIAEDDWTVLAEKINSIKLPE 157 Query: 147 YAVTEFTLYASSFARGRTRYTPLKRW 172 V FTLY S Y+ +K + Sbjct: 158 TEVNGFTLYKSVLTPDGPIYSVIKEY 183 >UniRef50_A6FXB0 2',5' RNA ligase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FXB0_9DELT Length = 180 Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 13/131 (9%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF AIDLP I ++ R R + LHLTL F+GEV + + L G Sbjct: 3 RLFLAIDLPDPIDFELELLRGG---IHGARWQTREQLHLTLHFIGEVDGGEARRLRAALG 59 Query: 66 RIRQPGFTLTLDDAGQW---LRSRVVWLGMRQ--PPRGLIQ-LANMLRSQAARSGCFQSN 119 + P F L L +G + ++ +W+G R+ P R L Q A +L +Q + Sbjct: 60 ALESPAFELELFGSGVFPPRGQANTLWIGARESDPLRLLHQRTAAILDAQQ----LPRER 115 Query: 120 RPFHPHITLLR 130 R + PH+T+ R Sbjct: 116 RKYTPHVTVAR 126 >UniRef50_A0RYQ5 2'-5' RNA ligase n=1 Tax=Cenarchaeum symbiosum RepID=A0RYQ5_CENSY Length = 175 Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 35/100 (35%), Positives = 48/100 (48%), Gaps = 6/100 (6%) Query: 34 GRPVAADNLHLTLAFLGEVSAEKEKALSLLAGRIRQPGFTLTLDDAGQWLRS---RVVWL 90 GR V A+NLH TLAFLGE+ A G + FT+ G + + RVVW Sbjct: 29 GRQVGAENLHFTLAFLGEIDDAAAAAAGRALGSVSFEPFTVLFRGVGAFPSAKSPRVVWA 88 Query: 91 GMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPHITLLR 130 G+ + G LA + R+ + G R PH+T+LR Sbjct: 89 GVDEKGGG--ALAALARTVCSALGVSPDIRG-RPHLTMLR 125 >UniRef50_Q1BHE5 2',5' RNA ligase n=12 Tax=Burkholderiaceae RepID=Q1BHE5_BURCA Length = 207 Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust. Identities = 49/176 (27%), Positives = 69/176 (39%), Gaps = 11/176 (6%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALS--- 61 R FFA+ +P I A E PV A+ LH+TL LG+ + L+ Sbjct: 30 HRFFFAV-MPDTATAARIAGVAKSLQQEKDSPVDAERLHITLGSLGDFAYVPGATLARAR 88 Query: 62 LLAGRIRQPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQS 118 +A R+ P F++ D + R + + L + LI LR R G Sbjct: 89 AVADRMEVPSFSVRFDKIISFNRRSGRQPLVLTGKAGLEDLIDFRRQLRDALKRVGVPVF 148 Query: 119 NRPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 F PH+TLL A W+ V +F L S G++ Y L RW L Sbjct: 149 PSSFTPHVTLLYGAQRPDEYRIEPITWT--VFDFVLIDSWL--GKSHYDVLGRWPL 200 >UniRef50_Q3A1W4 2'-5' RNA ligase n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1W4_PELCD Length = 192 Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust. Identities = 42/136 (30%), Positives = 64/136 (47%), Gaps = 17/136 (12%) Query: 6 RLFFAIDLPAEIREQIIHWR---ATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSL 62 R F A L + E+I+ + + P + R V + +HLTLAFLG++S E++L Sbjct: 5 RAFIAAPLDGPVFEKIVRLQQELSAALP--SVRWVRPETMHLTLAFLGDIS---EESLEK 59 Query: 63 LAGRIRQPGFT---LTLDDAG-----QWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSG 114 + G + G +T+D G R RVVWLG+ Q L L + + Sbjct: 60 IGGSMLSIGSVFAPVTVDVGGLGAFPSLKRPRVVWLGL-QNANTLCDLQMTITDMLRQLQ 118 Query: 115 CFQSNRPFHPHITLLR 130 ++PF PH+TL R Sbjct: 119 VSWDDKPFKPHLTLGR 134 >UniRef50_Q9K7T9 ABC transporter (Permease) n=1 Tax=Bacillus halodurans RepID=Q9K7T9_BACHD Length = 186 Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust. Identities = 48/180 (26%), Positives = 74/180 (41%), Gaps = 41/180 (22%) Query: 8 FFAIDLPAEIREQIIHWRATHFPPEAGRPVAA----DNLHLTLAFLGEVSAEKEKALSLL 63 F AI LP EI++Q+ + H + P ++ H+TL FLG A+ L L Sbjct: 7 FLAISLPDEIKKQLDTFVQRH---KQSLPFKKWTHLEDYHITLVFLG---AQPHDRLERL 60 Query: 64 AGRIRQPGFTLT--------LDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGC 115 ++ G +T L GQ R R+ W G+R +L+ Q+ ++ C Sbjct: 61 VTACQKLGEHITSFPIQLEGLSTFGQEERPRIFWAGVRDSA----ELSAF--QQSVKTCC 114 Query: 116 FQSN-----RPFHPHITL---------LRDASEAVTIPPPGFNWSYAVTEFTLYASSFAR 161 Q RP+ PH+TL ++ + V+ PP VT F LY S + Sbjct: 115 QQEEISVERRPYRPHVTLAKKWIGKGSFKEVASEVSQPPARL---LHVTSFHLYRSHIGK 171 >UniRef50_B8GHT8 2'-5' RNA ligase n=1 Tax=Methanosphaerula palustris E1-9c RepID=B8GHT8_METPE Length = 179 Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust. Identities = 51/174 (29%), Positives = 73/174 (41%), Gaps = 12/174 (6%) Query: 6 RLFFAIDLPAEIREQIIHWR-ATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 R F IDLPA IRE+I + A P V +H+TL F+GEV+ E+ +S Sbjct: 3 RAFIGIDLPASIREEIAAVQPALRAVPADISLVNPAIIHITLRFIGEVTEEEIGRISAAL 62 Query: 65 GRIRQPGFTLTLDDA--GQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 I+ F +++ R RV+W G+ R L + + + G R F Sbjct: 63 QTIKVKPFPVSIRPVTLNSRTRPRVIWCGVEDQGRSA-ALHQAIEAVLSPLGYEPEARAF 121 Query: 123 HPHITLLR-----DASEAV--TIPPPGFNWSYAVTEFTLYASSFARGRTRYTPL 169 PH T+ R + E V ++ GF + V EF L S YT L Sbjct: 122 TPHATVGRIRRGHSSLEGVIDSLGQNGFG-DFEVGEFKLKQSVLTAKGPIYTDL 174 >UniRef50_C1CXY4 Putative 2`-5` RNA ligase n=1 Tax=Deinococcus deserti VCD115 RepID=C1CXY4_DEIDV Length = 244 Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust. Identities = 44/164 (26%), Positives = 64/164 (39%), Gaps = 23/164 (14%) Query: 6 RLFFAIDLPAEIREQII--------HWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKE 57 RLF+A+ +P +I + +WRA V D +H+TLA+L V+ E+ Sbjct: 66 RLFYALRVPTDISGPLAEAQRALRGNWRA----------VRRDQMHVTLAYLPSVAPERL 115 Query: 58 KALSLLAGRIRQPGFTLTLDDAGQWL----RSRVVWLGMRQPPRGLIQLANMLRSQAARS 113 L L + Q + + G S VW + GL +LA LR Sbjct: 116 DDLKRLGALLTQDVVPMEVRLRGTGYFPNEGSPRVWFAKVEA-EGLTELATKLREGIRNL 174 Query: 114 GCFQSNRPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYAS 157 + PF HITL R A + P F+ + LY S Sbjct: 175 DIQTDDLPFKAHITLARKKGPAPRVAPLTFDLGWQAGHAVLYRS 218 >UniRef50_D2S8G3 2'-5' RNA ligase n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S8G3_9ACTO Length = 188 Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust. Identities = 47/133 (35%), Positives = 58/133 (43%), Gaps = 6/133 (4%) Query: 4 PQRLFFAIDLPAEIREQIIHWRAT-HFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSL 62 P+RLFFA+ PAE + A P A R D HLTL FLG V ++ L Sbjct: 6 PRRLFFAVTPPAEALADLDQALAPLREMPGAPRWTPPDRWHLTLLFLGAVPPDRVAELVA 65 Query: 63 LAGRIRQ--PGFTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQ 117 A P TL L AG++ R +V W G+ GL LA L + A Sbjct: 66 AAAPAVAATPSMTLQLAGAGRFGSRRRPQVFWAGVTGDGDGLGALAGRLAAVARGLRMPV 125 Query: 118 SNRPFHPHITLLR 130 RPF H+TL R Sbjct: 126 EERPFRAHLTLGR 138 >UniRef50_A4BK99 2'-5' RNA ligase n=1 Tax=Reinekea blandensis MED297 RepID=A4BK99_9GAMM Length = 171 Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust. Identities = 47/177 (26%), Positives = 70/177 (39%), Gaps = 14/177 (7%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL 60 M RLFFA+ L ++ ++ W+ + P R V N HLTLA+LGE A L Sbjct: 1 MESSLRLFFALPLESDDAARVAQWQQSIAPQPRVRWVPTQNYHLTLAYLGETDASMIPEL 60 Query: 61 SLLAGR---IRQPGFTLTLDDAGQWLRSRVVWL--GMRQPPRGLIQLANMLRSQAARSGC 115 A + Q +L+ ++ S+ +W G ++PP L + R+ + Sbjct: 61 VDYATEQLDVGQLPIRWSLNHVSRF--SQGIWYLRGYQEPP----ALQHFARALSFLVPL 114 Query: 116 FQSNRPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRW 172 PF PHIT R T P + + +L S RY L W Sbjct: 115 HTQTAPFVPHITFARCDKHLDT---PDIDLAITFRRISLMQSVREGAGVRYRSLHDW 168 >UniRef50_C3NHZ6 2'-5' RNA ligase n=11 Tax=Sulfolobus RepID=C3NHZ6_SULIN Length = 194 Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 15/137 (10%) Query: 6 RLFFAIDLPA-----EIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL 60 RLF I++P EI E + + A + V N+H+TL FLGEV ++ + + Sbjct: 2 RLFIGIEVPQSPKLLEIFEIVKNAGADI------KLVEPYNIHITLLFLGEVREDRVEEV 55 Query: 61 SLLAGRIRQPGFTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQL-ANMLRSQAARSGCF 116 ++ F +TL G + R RVVW+G+ + + L Q+ + +L R Sbjct: 56 KDSMSGLKFNKFKVTLKGLGAFPNLTRPRVVWVGIVEGQQQLRQIRSYILNELLKRKIRP 115 Query: 117 QSNRPFHPHITLLRDAS 133 + ++ F PH+T+ R S Sbjct: 116 EDDKDFSPHLTIGRVKS 132 >UniRef50_D2MH67 2'-5' RNA ligase n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MH67_9BACT Length = 190 Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust. Identities = 40/144 (27%), Positives = 60/144 (41%), Gaps = 32/144 (22%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPV----------AADNLHLTLAFLGEVSAE 55 R F AIDLP+ ++ I E RPV +NLHL L FLG+ + Sbjct: 4 RTFLAIDLPSTLQSAI---------GENIRPVQRELPGLSWSKHENLHLNLKFLGDTAES 54 Query: 56 KEKALSLLAGRIRQPG------FTLTLDDAGQWLRSR---VVWLGMRQPPRGLIQLANML 106 + + L+ +P F + + G + R V+W+G+ L LA + Sbjct: 55 QVDRIRLVV----EPAISHVSPFVIACEGFGVFPNDRSPRVLWIGLGGDLDSLAALAECI 110 Query: 107 RSQAARSGCFQSNRPFHPHITLLR 130 G Q +RPF PH+T+ R Sbjct: 111 DRAVVPLGFPQEDRPFRPHLTVGR 134 >UniRef50_Q65G06 2'_5' RNA ligase YtlP n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65G06_BACLD Length = 201 Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust. Identities = 49/177 (27%), Positives = 74/177 (41%), Gaps = 24/177 (13%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL 60 MS F I +PAE+ + + ++ R V + H+TL FLG SAEKE+ L Sbjct: 1 MSVKPHYFIGIPIPAELSDPLYQTVSSRPEFSFHRWVHPLDYHITLVFLG--SAEKEQ-L 57 Query: 61 SLLAGRIRQPGFTLTLDDAG--QWLRSRVVWLGMRQPPR----------GLIQLANMLRS 108 ++LAG ++ L D+ Q R G PR L + ++ Sbjct: 58 AMLAGSLK-----LISDETAPFQLAIKRFGTFGKPSEPRILHVEPEYSAALFHVREQVKH 112 Query: 109 QAARSGCFQSNRPFHPHITLLR----DASEAVTIPPPGFNWSYAVTEFTLYASSFAR 161 A +G RPFHPH+T+ R AS + P S+ FT++ + R Sbjct: 113 AADAAGFEIEKRPFHPHVTVARKWNGSASFNGRLEPLEDAVSFTARHFTIFQTHLDR 169 >UniRef50_C4DT00 2'-5' RNA ligase n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DT00_9ACTO Length = 180 Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 46/102 (45%), Gaps = 3/102 (2%) Query: 32 EAGRPVAADNLHLTLAFLGEVSAEKEKALS--LLAGRIRQPGFTLTLDDAGQWLR-SRVV 88 + RP HLTLAF+GE+ + + +S L A GF L L R S + Sbjct: 27 DGARPTGRQTWHLTLAFIGELDDRRVEDVSAALTALSRTTAGFALRLAGGTVLGRTSTAL 86 Query: 89 WLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPHITLLR 130 +G L LA +R+ RSG RPF PH+T+ R Sbjct: 87 CVGTDGDTTALTALAERVRTGLRRSGVPFDERPFKPHLTVAR 128 >UniRef50_A1KCB4 2'-5' RNA ligase n=2 Tax=Betaproteobacteria RepID=A1KCB4_AZOSB Length = 185 Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust. Identities = 57/177 (32%), Positives = 72/177 (40%), Gaps = 17/177 (9%) Query: 2 SEPQRLFFAIDLPAEIREQIIH----WR-ATHFPPEAGRPVAADNLHLTLAFLGEVSAEK 56 + P RLF A+ A R + WR P + PV +D LHLTL F+G V ++ Sbjct: 11 ARPARLFLALWPDAATRRTLAQARDQWRWEQGSAPRSPAPVRSDKLHLTLHFIGNV--DR 68 Query: 57 EKALSLLAG-RIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGC 115 + +L AG + F L W R V L P L+ L L G Sbjct: 69 SRLPALQAGLAVACSAFELAFGRHALWARGIAV-LEPLALPPALLALHGALGDALRDLGL 127 Query: 116 FQSNRPFHPHITLLRDASEAVTIPP---PGFNW---SYAVTEFTLYASSFARGRTRY 166 RPF PH+TL R A A +PP P F W YA+ E L A T Y Sbjct: 128 PVEQRPFRPHVTLARHARNA--LPPLHTPPFTWRPAGYALVESRLDAGGGYHPLTHY 182 >UniRef50_B9LUM8 2'-5' RNA ligase n=7 Tax=Halobacteriaceae RepID=B9LUM8_HALLT Length = 190 Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust. Identities = 35/138 (25%), Positives = 54/138 (39%), Gaps = 13/138 (9%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 R FFA+DLP ++ ++ +A V + H+TL FLG+++ + + L Sbjct: 2 RAFFAVDLPDDLAPRVADAQAALGDAAGLALVDPEQTHVTLKFLGDIAEDNDDTTPTLDD 61 Query: 66 RI---RQPGFTLTLDDAGQWLRS----------RVVWLGMRQPPRGLIQLANMLRSQAAR 112 I +Q T +D + VVW G+ L L L + Sbjct: 62 VIAAGKQAVETANVDPFECAVEGFGVFPSLDYISVVWAGVDAGSAELTALHEALEVETTA 121 Query: 113 SGCFQSNRPFHPHITLLR 130 G N F PH+TL R Sbjct: 122 LGVDPENHAFTPHVTLAR 139 >UniRef50_A0B6Z0 2'-5' RNA ligase n=1 Tax=Methanosaeta thermophila PT RepID=A0B6Z0_METTP Length = 177 Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/127 (30%), Positives = 59/127 (46%), Gaps = 7/127 (5%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 R F A+DLP EI+ + + F + V + +H+TL FLGEV + + Sbjct: 2 RCFVAVDLPEEIKRGVPAIQQA-FAMNGLKLVDPNLVHITLKFLGEVEERRVDDIVNALA 60 Query: 66 RIRQPGFTLTLDDAGQW-LRS-RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 R+R F + G + RS RV+WLG P +LA + + G F+ ++ F Sbjct: 61 RVRFSPFQARITGVGAFPGRSIRVIWLGATGP---FEELARAVDTALEPFG-FERDKKFS 116 Query: 124 PHITLLR 130 H TL R Sbjct: 117 AHATLAR 123 >UniRef50_B2SRS6 2'-5' RNA ligase n=9 Tax=Xanthomonas RepID=B2SRS6_XANOP Length = 200 Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust. Identities = 52/180 (28%), Positives = 74/180 (41%), Gaps = 16/180 (8%) Query: 5 QRLFFAIDLPAEIREQI--IHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL-- 60 +RLFFA+ A EQ I G+P+A + LH+TL LG+ + +L Sbjct: 26 ERLFFAVMADAPTAEQAARIADSLLQGGHAEGKPLARERLHVTLHHLGDYAGGLPPSLVS 85 Query: 61 --SLLAGRIRQPGFTLTLDDAGQWLRSR----VVWLGMRQPPRGLIQLANMLRSQAARSG 114 + A R+ F + D G + R V G Q RGL L L +Q A G Sbjct: 86 RATQAAARVAMDAFAVEFDRVGTFGGRRSQLPCVLRGEEQ-VRGLYALQGALGTQLAHVG 144 Query: 115 CFQSNRPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 + + PH+TLL W+ V +F L S G++RY RW+L Sbjct: 145 -IAGDAQYTPHMTLLYCNQAVPQRRCDALAWT--VRDFALVRSFL--GQSRYQIEGRWSL 199 >UniRef50_B5HLE7 2',5' RNA ligase n=6 Tax=Streptomyces RepID=B5HLE7_9ACTO Length = 190 Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust. Identities = 53/186 (28%), Positives = 77/186 (41%), Gaps = 18/186 (9%) Query: 6 RLFFAIDLPAEIREQIIHWRAT--HFPPEAG-RPVAADNLHLTLAFLGEVSAEKEKALSL 62 RLF A+ P ++ E++ A P G R H TLAF GEV + LS Sbjct: 2 RLFAAVLPPQDVTEELAAVVAELRRLPGAEGLRWTGVPGWHFTLAFYGEVDDDVVPELSE 61 Query: 63 LAGRI--RQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGC-FQSN 119 R R P F L + G++ R +W G L LA + ++G + Sbjct: 62 RLERAARRTPCFPLAVRGGGEFGHGRALWAGASGELPALRLLAERAEAAGRKAGVEMGEH 121 Query: 120 RPFHPHITLLRDASEAVTIPP-----PGF-NWSYAVTEFTLYASSFARG-----RTRYTP 168 R + H+T+ R AV + P GF + ++ V E L S+ R + RY Sbjct: 122 RRYKAHLTVARSRG-AVEVRPYLSVLDGFTSRTWTVDELALVRSNLPRSGVPGEQPRYEV 180 Query: 169 LKRWAL 174 + RWAL Sbjct: 181 VGRWAL 186 >UniRef50_O26683 UPF0097 protein MTH_583 n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=Y583_METTH Length = 184 Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust. Identities = 39/132 (29%), Positives = 67/132 (50%), Gaps = 10/132 (7%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAG-RPVAADNLHLTLAFLGEVSAEKEKAL-SLL 63 R F A+DL +R+ + + T +A + V +NLH TL F G+V K + + +++ Sbjct: 4 RAFLAVDLDEGLRDHVSRIQDTLKSADAQVKFVEPENLHFTLKFFGDVGEGKLRRIENVV 63 Query: 64 AGRIR--QPGFTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQS 118 +R +P F +++ AG + RVVWLG+ + P L L + + G F+ Sbjct: 64 RDTLRGYEP-FEISIRGAGVFPNPRYIRVVWLGV-ENPETFSDLQRSLDMEFVKMG-FRP 120 Query: 119 NRPFHPHITLLR 130 R + PH+T+ R Sbjct: 121 ERDYVPHLTVGR 132 >UniRef50_Q21UK0 2',5' RNA ligase n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21UK0_RHOFD Length = 180 Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust. Identities = 40/131 (30%), Positives = 58/131 (44%), Gaps = 4/131 (3%) Query: 1 MSEPQRLFFAIDLPAEIREQII-HWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKA 59 ++ QRLF A+ +++ Q++ H R +P + A N H+TL F+G V A++ A Sbjct: 8 ITRTQRLFLALWPDEDVQGQLVAHARQWTWPAGCVQSAPA-NWHITLHFIGNVDADRVAA 66 Query: 60 LSLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 + A QP F L LD W V LG + P L L L Sbjct: 67 ILASADVPFQP-FELVLDQPRLWPHGLAV-LGTTEVPMPLRALYERLGYALRGLDLAVET 124 Query: 120 RPFHPHITLLR 130 RP+ PH+T R Sbjct: 125 RPYQPHVTFAR 135 >UniRef50_B3QXR5 Phosphoesterase HXTX n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QXR5_CHLT3 Length = 185 Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust. Identities = 40/131 (30%), Positives = 60/131 (45%), Gaps = 17/131 (12%) Query: 31 PEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAGRIRQPGFTLTLDDAGQWLRSRVVWL 90 P+A R A +LHLT+AFLG++SAE + A+ + ++ P F ++ D ++ + Sbjct: 26 PDALRVFDARDLHLTVAFLGKISAEAQHAVIRILEQLSHPAFEISFDRLVALPNAKRMSA 85 Query: 91 GMRQPPRGLIQLANMLRSQAARSGCFQS------NRPFHPHITLLR-----DASEAVTIP 139 + G + A + + R FQS RP PHIT+ R A E TI Sbjct: 86 ISLRVKDGASEAARFIETW--REPIFQSVALPPETRPPLPHITIARPKRNATAREKNTI- 142 Query: 140 PPGFNWSYAVT 150 NW A T Sbjct: 143 ---LNWCNAET 150 >UniRef50_C9N809 2'-5' RNA ligase n=2 Tax=Streptomyces RepID=C9N809_9ACTO Length = 198 Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust. Identities = 47/152 (30%), Positives = 63/152 (41%), Gaps = 24/152 (15%) Query: 40 DNLHLTLAFLGEVSAEK----EKALSLLAGRIRQPGFTL----TLDDAGQWLRSRVVWLG 91 ++ H+TLAFLGE+ L+ LA R P L T DD RV+W G Sbjct: 46 EDWHITLAFLGEIPTATVPLLRPPLARLASAHRPPRLALRGSGTFDD-------RVLWTG 98 Query: 92 MRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPHITLLR----DASEAVTIPP--PGFNW 145 + L LA +R+ G +RP PH+TL R D S I GF+ Sbjct: 99 VDGDLDELHLLAADVRTAVKGCGVAFEDRPLRPHLTLARARRGDRSSMAEIAEGVAGFDG 158 Query: 146 -SYAVTEFTLYASSFAR--GRTRYTPLKRWAL 174 + L S+F R G Y ++ WAL Sbjct: 159 RRWPAERLHLVGSNFGRSAGPIHYRDIEAWAL 190 >UniRef50_O66967 UPF0097 protein aq_768 n=2 Tax=Aquificaceae RepID=Y768_AQUAE Length = 188 Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust. Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 14/110 (12%) Query: 34 GRPVAADNLHLTLAFLGEVSA----EKEKALSLLAG-----RIRQPGFTLTLDDAGQWLR 84 G+ V N+H+TL FLG+++ E K L ++ RI+ G + D R Sbjct: 33 GKWVEPQNVHMTLQFLGDITEAQAIEVIKNLQEISKKNIPFRIKYKGLGVFPDVK----R 88 Query: 85 SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN-RPFHPHITLLRDAS 133 RV+W+G+ + L LA + A+ G N + F PH+T+ R S Sbjct: 89 PRVLWIGVSEGANKLTNLAKEVARLNAKKGIIPKNSKNFVPHVTICRIKS 138 >UniRef50_Q8TVM2 2'-5' RNA ligase n=1 Tax=Methanopyrus kandleri RepID=Q8TVM2_METKA Length = 188 Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust. Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 19/138 (13%) Query: 6 RLFFAIDL-PAEIREQIIHWRATHFPPEAG-RPVAADNLHLTLAFLGEVSAEK------- 56 R F +ID+ E+ +I+ + A + V +N+HLTL FLG++ + Sbjct: 5 RAFISIDIEDEEVVNRIVEVQERLKASGADLKLVEPENVHLTLKFLGDIPESRVTDVVNA 64 Query: 57 -EKALSLLAGRIRQPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAAR 112 EKA + +P FT+ L G + RVVW+G+++ +A +L + R Sbjct: 65 MEKAAETV-----EP-FTMRLKGIGVFPNPNYVRVVWIGVQEGSDETKAMAAVLEQELGR 118 Query: 113 SGCFQSNRPFHPHITLLR 130 G + + F PH+T+ R Sbjct: 119 MGFRRERKDFVPHVTVAR 136 >UniRef50_Q2RN52 2',5' RNA ligase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RN52_RHORT Length = 199 Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust. Identities = 49/169 (28%), Positives = 71/169 (42%), Gaps = 28/169 (16%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVA----ADNLHLTLAFLGEVSAEKEKALS 61 RLF A+ L +R ++ EAG P A A NLH+TL FLGE + + Sbjct: 3 RLFIALTLDDSLRARLSGL-------EAGIPGARWAPAQNLHVTLRFLGETEEGLAREID 55 Query: 62 LLAGRIRQPGFTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQS 118 +R FTL + G + R R++W G+ + P L L + + G Sbjct: 56 AALLSVRAEPFTLPIAGLGVFGGERRPRLLWAGVEKTP-ALTLLKGRIDAALRGLGVGPD 114 Query: 119 NRPFHPHITL----------LRDASEAVTIPPPGFNWSYAVTEFTLYAS 157 + PHI+L LR EA + G S VT F+L++S Sbjct: 115 EHVYSPHISLARLKTPDPERLRRFVEANNLSVRG---SLTVTSFSLFSS 160 >UniRef50_A6C5P9 2'-5' RNA ligase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C5P9_9PLAN Length = 189 Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust. Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 6/103 (5%) Query: 33 AGRPVAADNLHLTLAFLGEVSAEKEKALS--LLAGRIRQPGFTLTLDDAGQWLRS---RV 87 A +P+ + +H+TL FLG E +S L R R L G + R V Sbjct: 34 AVKPIDVEQMHITLKFLGPTELEDIMPVSRILKEMRSRFKRIKLAFKGLGAFPREDHPNV 93 Query: 88 VWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPHITLLR 130 +W G+ L+++ L + + G + + FHPH+TL R Sbjct: 94 IWAGISDA-EALLEMVEYLEEETQKLGYPRERKGFHPHLTLAR 135 >UniRef50_B5H0L7 2',5' RNA ligase n=2 Tax=Streptomyces RepID=B5H0L7_STRCL Length = 194 Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust. Identities = 57/190 (30%), Positives = 78/190 (41%), Gaps = 25/190 (13%) Query: 5 QRLFFAIDLP----AEIREQIIHWRATHFPPEAGRP--VAADNLHLTLAFLGEVSAE--K 56 RLF A+ P AE+ + + R P+AGR H TLAF+GEV Sbjct: 1 MRLFAAVLPPPGATAELADAVARLRGL---PDAGRLRWTGRAGWHFTLAFMGEVDGAVLP 57 Query: 57 EKALSLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGC- 115 E + L R F + + AGQ RV+W G G+ LA + AARSG Sbjct: 58 ELSARLARAARRTRAFGVRMHGAGQ-FGGRVLWTGAAGDIDGMRMLAERSYAAAARSGVP 116 Query: 116 FQSNRPFHPHITLLRDASEAVTIPP------PGFNWSYAVTEFTLYASSFARGRT----- 164 + +R + H+T+ R + E V + P P + VT L S G T Sbjct: 117 MEEHRAYRAHLTVAR-SREDVDLAPFVAGLAPFEGTPWDVTRIALVRSRLPTGGTPGEQP 175 Query: 165 RYTPLKRWAL 174 RY + W L Sbjct: 176 RYETVGAWDL 185 >UniRef50_C4L4Q9 2'-5' RNA ligase n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L4Q9_EXISA Length = 191 Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust. Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 8/123 (6%) Query: 40 DNLHLTLAFLGEVSAEKEKALSLLAGRIRQPGFTLTL-----DDAGQWLRSRVVWLGMRQ 94 + H+T+ FLG V ++ + + RI + TL D G+ R RV+ + + Sbjct: 36 EEFHMTIQFLGSVDEDELDEVKEITRRICEETLPFTLEFRAIDHFGRPDRPRVLTI-VPD 94 Query: 95 PPRGLIQLANMLRSQAARSGCFQSNRPFHPHITLLRDASEAVTIP--PPGFNWSYAVTEF 152 L +LA+ LR + + F PH+TL + E +P PP F+ + +V E Sbjct: 95 ASEPLQRLAHSLRHELVDVIPRLDRKSFVPHVTLAKKWGEGERVPYVPPEFHATESVEEL 154 Query: 153 TLY 155 LY Sbjct: 155 ILY 157 >UniRef50_D2LH53 2'-5' RNA ligase n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LH53_RHOVA Length = 202 Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust. Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 6/127 (4%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF ++LP ++ + RA + A+N H+TL F+G+++ + + Sbjct: 3 RLFTGLELPHDVVGHLSGLRAG---LSGASWIDAENYHITLRFVGDITDAQANDFADALA 59 Query: 66 RIRQPGFTLTLDDAGQW--LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 IR F + + G + + R +W G++ P L L A +G R F Sbjct: 60 DIRFESFDIAVSGLGSFGGHKPRSLWAGVKASP-ALETLQKAHERAARAAGLPPEPRNFT 118 Query: 124 PHITLLR 130 PH+TL R Sbjct: 119 PHVTLAR 125 >UniRef50_Q1PYI6 Similar to 2'-5' RNA ligase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PYI6_9BACT Length = 187 Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 55/131 (41%), Gaps = 6/131 (4%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRP-VAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF AI++ +RE+++H++ A VA +NLH+TL F+G EK + + Sbjct: 4 RLFIAIEITDAVREKVLHFQNDLKKASADVKWVAPENLHITLKFIGNTDEEKICGIVDVI 63 Query: 65 GR--IRQPGFTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 + I F + AG + RV++ G L + L G Sbjct: 64 HQSVIEIKPFDIRYSGAGTFPAGKYPRVIFAGAVDSSGALASIYERLNRHLTALGVPYDE 123 Query: 120 RPFHPHITLLR 130 F HIT+ R Sbjct: 124 HTFEAHITVGR 134 >UniRef50_D1WYH2 2'-5' RNA ligase n=2 Tax=Streptomyces RepID=D1WYH2_9ACTO Length = 209 Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust. Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 5/103 (4%) Query: 40 DNLHLTLAFLGEV-SAEKEKALSLLAG-RIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPR 97 ++ H+TLAFLGE+ A ++ LAG R+ L L G + RV+W G+ Sbjct: 58 EDWHITLAFLGELPVAAVPPLMAPLAGLAARRRPLRLALHGGGHF-DERVLWTGIAGDLA 116 Query: 98 GLIQLANMLRSQAARSGCFQSNRPFHPHITLLRD--ASEAVTI 138 GL LA +R+ G RP PH+TL R +A T+ Sbjct: 117 GLHHLATDVRALVRECGVSFPERPLRPHLTLARSRRGDQAATV 159 >UniRef50_C6XKV8 2'-5' RNA ligase n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XKV8_HIRBI Length = 179 Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust. Identities = 32/125 (25%), Positives = 51/125 (40%), Gaps = 6/125 (4%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF A+ +P I E + ++ + + +N HLTL F G V L Sbjct: 4 RLFAALPIPDHISEML---KSMQNGLDGAKWRHKENFHLTLNFYGNVEDHTAHDLDAALA 60 Query: 66 RIRQPGFTLTLDDAGQW--LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 I P TL L D GQ+ +W G+ + +++LA+ + + Sbjct: 61 TINLPPITLRLKDVGQFGGFDPHTLWAGV-EANEHILKLASKCKRPTRELKLHTDKHTYI 119 Query: 124 PHITL 128 PH+TL Sbjct: 120 PHVTL 124 >UniRef50_Q2B4M3 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B4M3_9BACI Length = 185 Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust. Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 7/129 (5%) Query: 8 FFAIDLPAEIREQI-IHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAGR 66 FFA+ LP + +E++ + A E + V + H+TLAFLG ++ + + L + Sbjct: 6 FFAVRLPDDAKEKLKLKCEAAAGMLEFQKWVHYQDYHITLAFLGNAGKDQLQHAARLVRK 65 Query: 67 I--RQPGFTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 + F+L+ G + + R+ W PR L ++ + +G RP Sbjct: 66 ALEEEEAFSLSTSRFGVFGKPDQPRIFWSDTAAQPR-LAEVRKKVFDACKEAGFQLETRP 124 Query: 122 FHPHITLLR 130 F PHITL R Sbjct: 125 FKPHITLAR 133 >UniRef50_C8W3K6 2'-5' RNA ligase n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W3K6_DESAS Length = 189 Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust. Identities = 44/191 (23%), Positives = 79/191 (41%), Gaps = 22/191 (11%) Query: 3 EPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRP-VAADNLHLTLAFLGEVSAEKEKALS 61 +P RLF+A++L +E++ +I ++ A V +N HLT+ FLG+ E + Sbjct: 2 QPIRLFWAVNLSSELKAKIAVLQSQLKKCGADVKWVDEENFHLTVKFLGDTEPE---IVP 58 Query: 62 LLAGRIRQP-----GFTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARS 113 ++ +++Q FTL ++ G + +V+W G+ L + + Sbjct: 59 VMVKKMKQEVGGLGVFTLRIEKLGVFPGKGLPKVIWAGVNGKKDKFRNLYDRTQRSLRTL 118 Query: 114 GCFQSNRPFHPHITLLR----DASEAVTIPPPGFNWSYA------VTEFTLYASSFARGR 163 G +P PH+TL R ++ +T FN S + L S R Sbjct: 119 GFAPDKKPLSPHLTLGRVRSARGTKELTAAMASFNSSNCFLGDEIIDSVDLMRSELTRNG 178 Query: 164 TRYTPLKRWAL 174 YT ++ L Sbjct: 179 AIYTIMESIVL 189 >UniRef50_D1A6E1 2'-5' RNA ligase n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1A6E1_THECD Length = 187 Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust. Identities = 48/156 (30%), Positives = 67/156 (42%), Gaps = 21/156 (13%) Query: 37 VAADNLHLTLAFLGEVSAEKEKALSLLAGRI-----RQPGFTLTL----DDAGQWLRSRV 87 VA D +H+TLAFLGE+ E+AL L R+ R P L+ G +RV Sbjct: 34 VARDKMHITLAFLGEID---ERALERLLPRLERAAGRHPRIELSFAGAGAFPGGGAHARV 90 Query: 88 VWLGMRQPPRGLIQLANMLRSQAARSG-CFQSNRPFHPHITLLRDASEAVTIPPPGFNWS 146 +W G+ L +LA + + R+G +R F PH+TL R P + Sbjct: 91 LWTGVYGDRGVLARLAASVNAAGRRAGIAVGEHRAFRPHLTLARSRRPTDMRPLIEGLSA 150 Query: 147 YAVTEFTLYASSFAR------GR--TRYTPLKRWAL 174 YA T +T R GR RY ++ W L Sbjct: 151 YAGTTWTADTVHLVRSHLPGKGRPGLRYETIRDWPL 186 >UniRef50_Q0W551 2'-5' RNA ligase n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W551_UNCMA Length = 180 Score = 42.0 bits (97), Expect = 0.008, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 11/130 (8%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL--SLL 63 R F A++L I+E+I F + + V + +H+TL FLG V ++ A+ +L Sbjct: 3 RTFIAVNLDPAIKEKIAEA-VGDFNMKGLKTVEPELVHITLKFLGNVEEDRIDAIADALK 61 Query: 64 AGRIRQPGFTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 G +P FT T G + RV+W+G P L N A F+ Sbjct: 62 EGVTVEP-FTATFRSIGGFPGTKNPRVIWIGAEGPFEAL----NKQVEDALAGIGFEREG 116 Query: 121 PFHPHITLLR 130 F+ H+T+ R Sbjct: 117 RFNAHVTIGR 126 >UniRef50_B8GVT8 2'-5' RNA ligase n=2 Tax=Caulobacter vibrioides RepID=B8GVT8_CAUCN Length = 179 Score = 42.0 bits (97), Expect = 0.009, Method: Compositional matrix adjust. Identities = 39/132 (29%), Positives = 59/132 (44%), Gaps = 19/132 (14%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAG------RPVAADNLHLTLAFLGEVSAEKEKA 59 RLF AI +P +I + ++ P + G RP+ A H+TL F+G+V+ + Sbjct: 3 RLFTAIAIPPQIGQGLL-------PRQGGIEGARWRPLEA--FHITLRFVGDVAEDLAAD 53 Query: 60 LSLLAGRIRQPGFTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARSGCF 116 L +I P F L L AG + VW G+ + L QL A +G Sbjct: 54 LDEALAQITAPAFDLELASAGHFGEGADIHAVWAGVDESAP-LRQLQKSHERAARTAGLK 112 Query: 117 QSNRPFHPHITL 128 +R + PH+TL Sbjct: 113 PESRLYTPHVTL 124 >UniRef50_C7MQW1 2'-5' RNA ligase n=1 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MQW1_SACVD Length = 176 Score = 40.8 bits (94), Expect = 0.019, Method: Compositional matrix adjust. Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 21/135 (15%) Query: 1 MSEPQRLFFAIDLPAE----IREQIIHWRATHFPPEAGRPVAADNLHLTLAFLG-EVSAE 55 MS+P RLF A+ A +RE++ + + P R V H+TL F G + Sbjct: 1 MSDPARLFTAVTPSAAAISALREELGRYPSGRGPL---RWVEVPQWHITLGFYGMDDPGT 57 Query: 56 KEKALSLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGC 115 + L +R P T+ L G + V+W+G+R+ GL ++A+ +R + Sbjct: 58 RASWLKARLAGLRAP--TVQLVGTGSF--PGVLWVGVRE--HGLTEVADAIRPE------ 105 Query: 116 FQSNRPFHPHITLLR 130 RPF PH+TL R Sbjct: 106 -DEKRPFRPHLTLAR 119 >UniRef50_A7HSX7 2'-5' RNA ligase n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HSX7_PARL1 Length = 183 Score = 40.8 bits (94), Expect = 0.022, Method: Compositional matrix adjust. Identities = 42/178 (23%), Positives = 74/178 (41%), Gaps = 17/178 (9%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF A+++P E E+++ + + R + + H+TL F+G+V + Sbjct: 3 RLFTALEIPDEAAEKLMRLQQGL---DGARWIERPDFHITLRFMGDVPENVAADIDEALA 59 Query: 66 RIRQPGFTLTLDDAGQW--LRSRVVWLG--MRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 I F + L+ G++ R +W G M +P R L S R G R Sbjct: 60 EIPMEPFEVELEGVGEFGGKRPHTLWAGVKMSEPLR---VLQGRHESAMRRVGLKPETRN 116 Query: 122 FHPHITLLR----DASEAVTIPPPGFNWS---YAVTEFTLYASSFARGRTRYTPLKRW 172 + PH+T+ R EA ++ + V +FTL+++ + G Y R+ Sbjct: 117 YTPHVTIARLSHVSTDEAYRFIEANNLFAAPRFEVEQFTLFSAKASTGGGPYVVKTRY 174 >UniRef50_A3TFV9 Putative uncharacterized protein n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TFV9_9MICO Length = 194 Score = 40.4 bits (93), Expect = 0.023, Method: Compositional matrix adjust. Identities = 41/146 (28%), Positives = 65/146 (44%), Gaps = 22/146 (15%) Query: 43 HLTLAFLGEVSAEK-----EKALSLLAGRIRQPGFTLTLDDAGQW---LRSRVVWLG-MR 93 H+TLAF+G+V+ E AG P L L AG + ++RVVW+ + Sbjct: 40 HVTLAFMGDVADHAVDDVMEAVAEASAGHAPIP---LQLSGAGVFPSPDQARVVWMDVLS 96 Query: 94 QPPRGLIQLANM---LRSQAARSGCFQSNRPFHPHITLLR-----DASEAVTIPPPGFNW 145 P GL +L ++ +R R G + + PH+TL R +A+ + + Sbjct: 97 SAPDGLAELESLALGVRRAVGRVGAAPAGGDYRPHLTLARSRHPFEATHWLRVMDAYAGP 156 Query: 146 SYAVTEFTLYASSFARGRTR--YTPL 169 S+ E T++ S GR R Y P+ Sbjct: 157 SWIAEEVTVFVSHLGEGRGRPHYEPV 182 >UniRef50_B2T575 Phosphoesterase HXTX n=6 Tax=Burkholderiales RepID=B2T575_BURPP Length = 201 Score = 40.4 bits (93), Expect = 0.027, Method: Compositional matrix adjust. Identities = 45/151 (29%), Positives = 61/151 (40%), Gaps = 15/151 (9%) Query: 35 RPVAADNLHLTLAFLGEVSA----EKEKALSLLAGRIRQPGFTLTLDDAGQWL---RSRV 87 +P+AA LH+TL LG + E+ A A IR F++ D A + R Sbjct: 50 KPLAAGRLHVTLHHLGNFAGGLPQERVDAAMQAAASIRMEPFSVEFDAAVSFASKPRPGP 109 Query: 88 VWLGMRQPPRGLIQLANMLRSQAARSG----CFQSNRPFHPHITLLRDASEAVTIPPPGF 143 + LG + GL L + L +G S + PH+TL P Sbjct: 110 LVLGGGEGVAGLHVLHDALGCALQNAGFGDRAVSSAAHYTPHVTLAYGMPWVAARPVEPV 169 Query: 144 NWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 W+ V EF L S GRTR+ L RW L Sbjct: 170 CWN--VREFALMHSLL--GRTRHVALARWTL 196 >UniRef50_A8M0B6 2'-5' RNA ligase n=2 Tax=Salinispora RepID=A8M0B6_SALAI Length = 192 Score = 40.4 bits (93), Expect = 0.029, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 9/101 (8%) Query: 39 ADNLHLTLAFLGEVSAEK----EKALSLLAGRIRQ-----PGFTLTLDDAGQWLRSRVVW 89 A H+TLAFL V E+ E +L +A R P L RS V+W Sbjct: 41 AAQAHVTLAFLAAVPTEQLMAVEGSLDQVARWSRDSWPAPPRLRLGGGGTFGQGRSTVLW 100 Query: 90 LGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPHITLLR 130 +G+R L +L ++RS+ + +P+HPH+T+ R Sbjct: 101 VGLRGDLAELTELGQVVRSRLRANRLPYDEKPWHPHLTVAR 141 >UniRef50_B6J032 2'-5' RNA ligase n=6 Tax=Coxiella burnetii RepID=B6J032_COXB2 Length = 184 Score = 40.0 bits (92), Expect = 0.032, Method: Compositional matrix adjust. Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 9/142 (6%) Query: 40 DNLHLTLAFLGEVSAEKEKALSLLAGRIRQP--GFTLTLDDAG----QWLRSRVVWLGMR 93 +N HLTL FLG+V+ E + L + + F + ++ + LR V ++ + Sbjct: 44 ENWHLTLRFLGDVTPEALEILRQATAKEAKETIKFKININKIDIFPPEKLRLLVAYIERQ 103 Query: 94 QPPRGLIQLANMLRSQAARSGCFQSNRPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFT 153 + L QL L A ++G + R F PHITL + P + S E Sbjct: 104 E---HLSQLFFNLDQAAEKAGLAREERLFLPHITLAKSRRPIRHFDPLDCDLSIHAEELV 160 Query: 154 LYASSFARGRTRYTPLKRWALT 175 ++ S ++Y PL ++ + Sbjct: 161 IFESRPTNDGSQYVPLYKFQFS 182 >UniRef50_C7LNR7 2'-5' RNA ligase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LNR7_DESBD Length = 184 Score = 39.7 bits (91), Expect = 0.040, Method: Compositional matrix adjust. Identities = 39/134 (29%), Positives = 57/134 (42%), Gaps = 13/134 (9%) Query: 6 RLFFAIDLPAEIREQIIH-----WRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL 60 RLF I LP E QII W+ + V D H+TL FLGEV ++ A+ Sbjct: 2 RLFIGIPLPGEY-AQIIGRIQEAWKKRLTSKMSW--VRPDLAHVTLKFLGEVDEDRVVAI 58 Query: 61 SLLAGRIRQPGFTLTLDDAGQWL----RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCF 116 + F + AG + RV+W+G+RQ L A++G Sbjct: 59 VQAMREAARGSFEMQ-GGAGGFFPPKGAPRVIWVGLRQGREECAAYFEELDGGLAQAGFV 117 Query: 117 QSNRPFHPHITLLR 130 ++PF H+T+ R Sbjct: 118 AESKPFAAHLTVAR 131 >UniRef50_Q12JD3 2',5' RNA ligase n=1 Tax=Shewanella denitrificans OS217 RepID=Q12JD3_SHEDO Length = 212 Score = 39.7 bits (91), Expect = 0.046, Method: Compositional matrix adjust. Identities = 38/139 (27%), Positives = 58/139 (41%), Gaps = 9/139 (6%) Query: 3 EPQRLFFAIDLPAEIREQI--IHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL 60 E +RLF +PA E + + + T + +AA+N HLTL FLG + L Sbjct: 15 EFKRLFLGFSIPANQTELLTALQQQLTPHLNSDAKAIAAENFHLTLLFLGGFPTAQLPQL 74 Query: 61 SLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 +R F TL W +++ L P L LA + +Q A Q++ Sbjct: 75 LTTIDTLRLALFNQTLTKLCFWPGPKILCLKGEACP-NLADLAEQVSTQLAPLIHNQAHN 133 Query: 121 P------FHPHITLLRDAS 133 P + PHI+L R + Sbjct: 134 PLIKEHCYTPHISLFRKVT 152 >UniRef50_Q67NU4 Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67NU4_SYMTH Length = 193 Score = 38.9 bits (89), Expect = 0.067, Method: Compositional matrix adjust. Identities = 35/100 (35%), Positives = 44/100 (44%), Gaps = 7/100 (7%) Query: 37 VAADNLHLTLAFLGEVS---AEKEKALSLLAGRIRQPGFTLTLDDAGQW--LRS-RVVWL 90 V D H TL F GE+ E A P F L + G + RS RV+W Sbjct: 39 VRPDQFHFTLRFFGELGPTEVEAAAQALRRAAAGTAP-FPLAVAGLGAFPSARSPRVLWA 97 Query: 91 GMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPHITLLR 130 G + LI LA L + A +G + RPF PH+TL R Sbjct: 98 GTGEGREQLIALARRLEDELAAAGFGREERPFQPHLTLGR 137 >UniRef50_D1ULJ6 Phosphoesterase HXTX n=1 Tax=Burkholderia sp. CCGE1001 RepID=D1ULJ6_9BURK Length = 205 Score = 38.9 bits (89), Expect = 0.068, Method: Compositional matrix adjust. Identities = 50/157 (31%), Positives = 63/157 (40%), Gaps = 21/157 (13%) Query: 34 GRPVAADNLHLTLAFLGEVS-----AEKEKALSLLAGRIRQPGFTLTLDDAGQWL---RS 85 GRP+AA LH+TL LG + A E A+ A IR FT+ D + R Sbjct: 49 GRPLAASRLHVTLRHLGTFAGGLPPAHVEAAMQ-AAASIRMAPFTVEFDTVASFASKPRP 107 Query: 86 RVVWLGMRQPPRGLIQLANMLRS---QAARSGCFQSNRP-----FHPHITLLRDASEAVT 137 + L GL L + L A R+ +S R F PH+TL A Sbjct: 108 GPLVLTGTDGVVGLHTLHDALHDAFYDALRNCGIESGRSSAAGLFTPHVTLAYGLPWAAA 167 Query: 138 IPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 P W+ V F L S GRTR+ L RW L Sbjct: 168 QPVEPVCWN--VRAFALIHSLL--GRTRHVVLARWPL 200 >UniRef50_A8L7H3 2'-5' RNA ligase n=2 Tax=Frankia RepID=A8L7H3_FRASN Length = 224 Score = 38.9 bits (89), Expect = 0.073, Method: Compositional matrix adjust. Identities = 34/91 (37%), Positives = 45/91 (49%), Gaps = 7/91 (7%) Query: 43 HLTLAFLGEVSAEKEKALSLLAGRI--RQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLI 100 H+TLAFLG V AL+ GR+ R L LD AG++ RV+W + L Sbjct: 79 HVTLAFLGPVEPGTRPALAERLGRVAHRHGPVELRLDGAGRF-GHRVLWARVAG---DLG 134 Query: 101 QLANMLRSQAARSGC-FQSNRPFHPHITLLR 130 LA +R A R+G +RP H+TL R Sbjct: 135 PLAAGVRRAAVRAGADGGDDRPLRAHLTLAR 165 >UniRef50_A4YHN8 2'-5' RNA ligase n=1 Tax=Metallosphaera sedula DSM 5348 RepID=A4YHN8_METS5 Length = 180 Score = 38.9 bits (89), Expect = 0.079, Method: Compositional matrix adjust. Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 3/97 (3%) Query: 37 VAADNLHLTLAFLGEVSAEKEKALSLLAGRIRQPGFTLTLDDAGQW---LRSRVVWLGMR 93 V N+H+TLAFLGEV+ ++ + ++ F + G + R RVVW+G+ Sbjct: 32 VEPQNVHITLAFLGEVAEDRVNLVRESLDEVKFTAFRVVFRGLGAFPSVSRPRVVWMGIT 91 Query: 94 QPPRGLIQLANMLRSQAARSGCFQSNRPFHPHITLLR 130 + L ++ L F PH+TL R Sbjct: 92 EGFNELKRIRTSLVKALNSRRVRVEEEQFVPHLTLGR 128 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P37025 2'-5'-RNA ligase n=156 Tax=Enterobacteriaceae Re... 249 3e-65 UniRef50_Q3JCL1 2',5' RNA ligase n=2 Tax=Nitrosococcus oceani Re... 184 9e-46 UniRef50_B5YF63 2'-5' RNA ligase n=2 Tax=Dictyoglomus RepID=B5YF... 181 8e-45 UniRef50_D1CCP6 2'-5' RNA ligase n=1 Tax=Thermobaculum terrenum ... 179 3e-44 UniRef50_B5YJG0 2'-5' RNA ligase n=1 Tax=Thermodesulfovibrio yel... 179 4e-44 UniRef50_Q60BS9 Putative 2'-5' RNA ligase n=1 Tax=Methylococcus ... 179 4e-44 UniRef50_A4BU36 2'-5' RNA ligase, putative n=1 Tax=Nitrococcus m... 177 1e-43 UniRef50_Q2Y753 2',5' RNA ligase n=1 Tax=Nitrosospira multiformi... 175 4e-43 UniRef50_A1AS05 2'-5' RNA ligase n=1 Tax=Pelobacter propionicus ... 174 9e-43 UniRef50_Q5NYK1 2'-5' RNA ligase n=1 Tax=Aromatoleum aromaticum ... 174 1e-42 UniRef50_Q1QSH4 2',5' RNA ligase n=1 Tax=Chromohalobacter salexi... 173 2e-42 UniRef50_C8SB57 2'-5' RNA ligase n=1 Tax=Ferroglobus placidus DS... 173 3e-42 UniRef50_B6IVY2 2'-5' RNA ligase, putative n=1 Tax=Rhodospirillu... 172 4e-42 UniRef50_C4ZJW1 2'-5' RNA ligase n=1 Tax=Thauera sp. MZ1T RepID=... 171 1e-41 UniRef50_A8U4H0 2'-5' RNA ligase n=1 Tax=alpha proteobacterium B... 170 2e-41 UniRef50_Q39PT9 2',5' RNA ligase n=4 Tax=Geobacter RepID=Q39PT9_... 170 2e-41 UniRef50_Q3SK36 2',5' RNA ligase n=1 Tax=Thiobacillus denitrific... 169 3e-41 UniRef50_A3DNW5 2'-5' RNA ligase n=1 Tax=Staphylothermus marinus... 169 4e-41 UniRef50_A6EV98 2',5' RNA ligase n=1 Tax=Marinobacter algicola D... 169 4e-41 UniRef50_Q1IPR0 2',5' RNA ligase n=1 Tax=Candidatus Koribacter v... 168 8e-41 UniRef50_Q47EL0 2',5' RNA ligase n=1 Tax=Dechloromonas aromatica... 167 1e-40 UniRef50_Q0AGI2 2'-5' RNA ligase n=2 Tax=Nitrosomonas RepID=Q0AG... 167 2e-40 UniRef50_B5E8F5 2'-5' RNA ligase n=3 Tax=Geobacter RepID=B5E8F5_... 166 3e-40 UniRef50_A1HSF5 2'-5' RNA ligase n=1 Tax=Thermosinus carboxydivo... 165 5e-40 UniRef50_Q9X2H4 UPF0097 protein TM_1860 n=9 Tax=Thermotogaceae R... 165 5e-40 UniRef50_B8GQV2 2'-5' RNA ligase n=1 Tax=Thioalkalivibrio sp. HL... 165 5e-40 UniRef50_C4L922 2'-5' RNA ligase n=1 Tax=Tolumonas auensis DSM 9... 165 6e-40 UniRef50_A5D3U3 2'-5' RNA ligase n=1 Tax=Pelotomaculum thermopro... 165 6e-40 UniRef50_Q0BV79 2'-5' RNA ligase n=2 Tax=Acetobacteraceae RepID=... 164 7e-40 UniRef50_O28125 UPF0097 protein AF_2157 n=1 Tax=Archaeoglobus fu... 164 8e-40 UniRef50_C7R810 2'-5' RNA ligase n=1 Tax=Kangiella koreensis DSM... 164 1e-39 UniRef50_B3EA65 2'-5' RNA ligase n=1 Tax=Geobacter lovleyi SZ Re... 164 1e-39 UniRef50_C6P1X6 2'-5' RNA ligase n=1 Tax=Sideroxydans lithotroph... 163 2e-39 UniRef50_D1C514 2'-5' RNA ligase n=1 Tax=Sphaerobacter thermophi... 163 3e-39 UniRef50_Q15YM1 2'-5' RNA ligase n=1 Tax=Pseudoalteromonas atlan... 163 3e-39 UniRef50_A8MDT9 2'-5' RNA ligase n=1 Tax=Caldivirga maquilingens... 163 3e-39 UniRef50_Q2LPL4 2'-5' RNA ligase n=1 Tax=Syntrophus aciditrophic... 162 5e-39 UniRef50_Q2VZ42 2'-5' RNA ligase n=2 Tax=Magnetospirillum RepID=... 162 5e-39 UniRef50_B8FSV2 2'-5' RNA ligase n=2 Tax=Desulfitobacterium hafn... 161 6e-39 UniRef50_C6J532 2'-5' RNA ligase n=1 Tax=Paenibacillus sp. oral ... 161 8e-39 UniRef50_A0KP01 2'-5' RNA ligase n=2 Tax=Aeromonas RepID=A0KP01_... 161 8e-39 UniRef50_B5JNL9 2'-5' RNA ligase n=1 Tax=Verrucomicrobiae bacter... 161 9e-39 UniRef50_Q3Z6J0 2'-5' RNA ligase family protein n=5 Tax=Dehaloco... 161 9e-39 UniRef50_A3QHP4 2'-5' RNA ligase n=1 Tax=Shewanella loihica PV-4... 161 1e-38 UniRef50_O57823 UPF0097 protein PH0099 n=10 Tax=Euryarchaeota Re... 161 1e-38 UniRef50_C0GSW7 2'-5' RNA ligase n=1 Tax=Desulfonatronospira thi... 161 1e-38 UniRef50_Q11D05 2'-5' RNA ligase n=26 Tax=Rhizobiales RepID=Q11D... 161 1e-38 UniRef50_Q3AEX2 Putative 2'-5' RNA ligase n=1 Tax=Carboxydotherm... 161 1e-38 UniRef50_Q2Z065 Putative 2'-5' RNA ligase n=1 Tax=uncultured gam... 160 2e-38 UniRef50_A1S9X0 Putative 2'-5' RNA ligase n=1 Tax=Shewanella ama... 160 2e-38 UniRef50_C9R942 2'-5' RNA ligase n=1 Tax=Ammonifex degensii KC4 ... 160 2e-38 UniRef50_Q58963 UPF0097 protein MJ1568 n=11 Tax=Methanococcales ... 160 2e-38 UniRef50_A1U2M3 2'-5' RNA ligase n=1 Tax=Marinobacter aquaeolei ... 159 4e-38 UniRef50_A5V4K1 2'-5' RNA ligase n=1 Tax=Sphingomonas wittichii ... 159 4e-38 UniRef50_A1RX48 2'-5' RNA ligase n=1 Tax=Thermofilum pendens Hrk... 159 4e-38 UniRef50_A8ZY65 2'-5' RNA ligase n=1 Tax=Desulfococcus oleovoran... 158 6e-38 UniRef50_B8I3E4 2'-5' RNA ligase n=1 Tax=Clostridium cellulolyti... 158 6e-38 UniRef50_B4S0B5 2,5 RNA ligase n=2 Tax=Alteromonas macleodii Rep... 158 9e-38 UniRef50_B8FL01 2'-5' RNA ligase n=1 Tax=Desulfatibacillum alken... 158 1e-37 UniRef50_B8D3G7 2'-5' RNA ligase n=1 Tax=Desulfurococcus kamchat... 157 1e-37 UniRef50_C8X1G4 2'-5' RNA ligase n=1 Tax=Desulfohalobium retbaen... 157 1e-37 UniRef50_Q0Q0I5 LigT n=1 Tax=Heliophilum fasciatum RepID=Q0Q0I5_... 157 1e-37 UniRef50_B1I1T7 2'-5' RNA ligase n=1 Tax=Candidatus Desulforudis... 157 2e-37 UniRef50_Q72W43 2'-5' RNA ligase n=2 Tax=Leptospira interrogans ... 157 2e-37 UniRef50_B1ZYS3 2'-5' RNA ligase n=1 Tax=Opitutus terrae PB90-1 ... 156 2e-37 UniRef50_C7IIN7 2'-5' RNA ligase n=1 Tax=Clostridium papyrosolve... 156 2e-37 UniRef50_A0LLA5 2'-5' RNA ligase n=1 Tax=Syntrophobacter fumarox... 156 3e-37 UniRef50_Q2BMM5 2',5' RNA ligase n=1 Tax=Neptuniibacter caesarie... 156 3e-37 UniRef50_Q02P23 2'-5' RNA ligase n=7 Tax=Pseudomonas RepID=Q02P2... 156 4e-37 UniRef50_C1DGI0 2-5 RNA ligase protein n=1 Tax=Azotobacter vinel... 155 5e-37 UniRef50_B8CXC1 2'-5' RNA ligase n=1 Tax=Halothermothrix orenii ... 155 5e-37 UniRef50_Q1GUY9 2',5' RNA ligase n=2 Tax=Sphingomonadales RepID=... 155 5e-37 UniRef50_A3DCR1 2'-5' RNA ligase n=3 Tax=Clostridium thermocellu... 155 5e-37 UniRef50_A3K2S8 2',5' RNA ligase n=1 Tax=Sagittula stellata E-37... 155 6e-37 UniRef50_A9WCY3 2'-5' RNA ligase n=3 Tax=Chloroflexus RepID=A9WC... 155 7e-37 UniRef50_D0CTG2 2'-5' RNA ligase n=1 Tax=Silicibacter lacuscaeru... 155 7e-37 UniRef50_B4D614 2'-5' RNA ligase n=1 Tax=Chthoniobacter flavus E... 154 9e-37 UniRef50_Q2FTJ3 2',5' RNA ligase n=1 Tax=Methanospirillum hungat... 154 1e-36 UniRef50_C6MFU4 2'-5' RNA ligase n=1 Tax=Nitrosomonas sp. AL212 ... 153 2e-36 UniRef50_B9JCJ4 2'-5' RNA ligase n=44 Tax=Rhizobiales RepID=B9JC... 153 2e-36 UniRef50_Q0AKK0 2'-5' RNA ligase n=1 Tax=Maricaulis maris MCS10 ... 153 2e-36 UniRef50_C5V3P4 2'-5' RNA ligase n=1 Tax=Gallionella ferruginea ... 153 2e-36 UniRef50_A9B5P6 2'-5' RNA ligase n=1 Tax=Herpetosiphon aurantiac... 153 3e-36 UniRef50_A4XVF3 2'-5' RNA ligase n=1 Tax=Pseudomonas mendocina y... 153 3e-36 UniRef50_Q1NWG3 2',5' RNA ligase n=4 Tax=Deltaproteobacteria Rep... 153 3e-36 UniRef50_D2MH67 2'-5' RNA ligase n=1 Tax=Candidatus Poribacteria... 153 4e-36 UniRef50_D1ZYF9 Whole genome shotgun sequence assembly, contig_3... 152 4e-36 UniRef50_B9KQ60 2'-5' RNA ligase n=4 Tax=Rhodobacter sphaeroides... 152 6e-36 UniRef50_B0K2A3 2'-5' RNA ligase n=9 Tax=Thermoanaerobacter RepI... 152 6e-36 UniRef50_A9A3X7 2'-5' RNA ligase n=1 Tax=Nitrosopumilus maritimu... 152 6e-36 UniRef50_C6QFN4 2'-5' RNA ligase n=1 Tax=Hyphomicrobium denitrif... 151 7e-36 UniRef50_Q74MW1 NEQ502 n=1 Tax=Nanoarchaeum equitans RepID=Q74MW... 151 8e-36 UniRef50_A3CSA5 2'-5' RNA ligase n=1 Tax=Methanoculleus marisnig... 151 9e-36 UniRef50_D0MJ05 2'-5' RNA ligase n=1 Tax=Rhodothermus marinus DS... 151 1e-35 UniRef50_A7GTX3 2'-5' RNA ligase n=73 Tax=Bacillus cereus group ... 151 1e-35 UniRef50_Q0BX97 2'-5' RNA ligase n=1 Tax=Hyphomonas neptunium AT... 151 1e-35 UniRef50_B6JCZ3 2'-5' RNA ligase n=13 Tax=Alphaproteobacteria Re... 150 2e-35 UniRef50_B1L7J5 2'-5' RNA ligase n=1 Tax=Candidatus Korarchaeum ... 150 2e-35 UniRef50_Q1IWF3 2',5' RNA ligase n=2 Tax=Deinococcus RepID=Q1IWF... 150 2e-35 UniRef50_Q47TD6 2',5' RNA ligase n=1 Tax=Thermobifida fusca YX R... 150 2e-35 UniRef50_B9Z7M0 2'-5' RNA ligase n=1 Tax=Lutiella nitroferrum 20... 150 2e-35 UniRef50_C3XAD7 2',5' RNA ligase n=1 Tax=Oxalobacter formigenes ... 150 2e-35 UniRef50_C6BS46 2'-5' RNA ligase n=1 Tax=Desulfovibrio salexigen... 149 3e-35 UniRef50_UPI000178815C 2''''-5'''' RNA ligase n=1 Tax=Geobacillu... 149 3e-35 UniRef50_A4EPW8 2'-5' RNA ligase n=1 Tax=Roseobacter sp. SK209-2... 149 4e-35 UniRef50_Q46QC5 2',5' RNA ligase n=4 Tax=Cupriavidus RepID=Q46QC... 149 4e-35 UniRef50_C0N774 2'-5' RNA ligase n=1 Tax=Methylophaga thiooxidan... 149 5e-35 UniRef50_A9FR36 Putative uncharacterized protein n=1 Tax=Sorangi... 148 6e-35 UniRef50_A1SVM8 2'-5' RNA ligase n=1 Tax=Psychromonas ingrahamii... 148 6e-35 UniRef50_Q88K67 2'-5' RNA ligase, putative n=6 Tax=Pseudomonas R... 148 7e-35 UniRef50_A7GH44 2'-5' RNA ligase n=10 Tax=Clostridium RepID=A7GH... 148 8e-35 UniRef50_Q12W73 2'-5' RNA ligase n=4 Tax=Methanosarcinaceae RepI... 148 8e-35 UniRef50_A0B6Z0 2'-5' RNA ligase n=1 Tax=Methanosaeta thermophil... 148 1e-34 UniRef50_A8FGD3 2'-5' RNA ligase n=2 Tax=Bacillus pumilus RepID=... 148 1e-34 UniRef50_B9L2B1 2'-5' RNA ligase n=1 Tax=Thermomicrobium roseum ... 147 1e-34 UniRef50_Q5SHB1 2'-5' RNA ligase n=7 Tax=Thermaceae RepID=Q5SHB1... 147 1e-34 UniRef50_B3T3P3 Putative 2',5' RNA ligase family protein n=2 Tax... 146 2e-34 UniRef50_B8CTB7 2'-5' RNA ligase, putative n=1 Tax=Shewanella pi... 146 2e-34 UniRef50_B9ZLA9 2'-5' RNA ligase n=1 Tax=Thioalkalivibrio sp. K9... 146 3e-34 UniRef50_C1F3J7 2'-5' RNA ligase n=1 Tax=Acidobacterium capsulat... 146 3e-34 UniRef50_B0TTJ1 2'-5' RNA ligase n=2 Tax=Shewanella RepID=B0TTJ1... 146 3e-34 UniRef50_Q1ARL5 2',5' RNA ligase n=1 Tax=Rubrobacter xylanophilu... 146 3e-34 UniRef50_Q2S292 2'-5' RNA ligase n=1 Tax=Salinibacter ruber DSM ... 146 3e-34 UniRef50_A3VLU9 2'-5' RNA ligase n=1 Tax=Rhodobacterales bacteri... 146 3e-34 UniRef50_B8GHT8 2'-5' RNA ligase n=1 Tax=Methanosphaerula palust... 146 3e-34 UniRef50_A8UTL9 Putative uncharacterized protein n=1 Tax=Hydroge... 146 4e-34 UniRef50_Q0ABC1 2'-5' RNA ligase n=1 Tax=Alkalilimnicola ehrlich... 146 4e-34 UniRef50_A8F8W1 2'-5' RNA ligase n=1 Tax=Thermotoga lettingae TM... 145 6e-34 UniRef50_Q2CG27 2'-5' RNA ligase (Fragment) n=1 Tax=Oceanicola g... 145 7e-34 UniRef50_C3X1K9 2'-5' RNA ligase n=1 Tax=Oxalobacter formigenes ... 145 7e-34 UniRef50_C4XNB5 2'-5' RNA ligase n=1 Tax=Desulfovibrio magneticu... 144 8e-34 UniRef50_B2A6J9 2'-5' RNA ligase n=1 Tax=Natranaerobius thermoph... 144 9e-34 UniRef50_B0T6B2 2'-5' RNA ligase n=5 Tax=Caulobacteraceae RepID=... 144 9e-34 UniRef50_Q28V17 2'5' RNA ligase n=1 Tax=Jannaschia sp. CCS1 RepI... 144 1e-33 UniRef50_A1RS17 2'-5' RNA ligase n=5 Tax=Thermoproteaceae RepID=... 144 1e-33 UniRef50_A4TU26 2',5' RNA ligase n=1 Tax=Magnetospirillum gryphi... 144 1e-33 UniRef50_Q3A1W4 2'-5' RNA ligase n=1 Tax=Pelobacter carbinolicus... 144 1e-33 UniRef50_A6FTX1 2'-5' RNA ligase n=1 Tax=Roseobacter sp. AzwK-3b... 144 2e-33 UniRef50_Q8EP21 ABC transporter permease n=1 Tax=Oceanobacillus ... 144 2e-33 UniRef50_B9LUM8 2'-5' RNA ligase n=7 Tax=Halobacteriaceae RepID=... 143 2e-33 UniRef50_A9IDL0 Putative 2'-5' RNA ligase n=3 Tax=Bordetella Rep... 143 2e-33 UniRef50_A3ZLX4 2'-5' RNA ligase n=1 Tax=Blastopirellula marina ... 143 3e-33 UniRef50_C9PFM9 Putative uncharacterized protein n=1 Tax=Vibrio ... 142 4e-33 UniRef50_A7NPU2 2'-5' RNA ligase n=2 Tax=Roseiflexus RepID=A7NPU... 142 5e-33 UniRef50_C0EIB1 Putative uncharacterized protein n=1 Tax=Clostri... 142 5e-33 UniRef50_B4X1Z9 2'-5' RNA ligase n=2 Tax=Alcanivorax RepID=B4X1Z... 142 5e-33 UniRef50_C3NHZ6 2'-5' RNA ligase n=11 Tax=Sulfolobus RepID=C3NHZ... 142 6e-33 UniRef50_Q7UM43 Putative uncharacterized protein n=1 Tax=Rhodopi... 142 6e-33 UniRef50_B5IAZ8 2'-5' RNA ligase n=2 Tax=Aciduliprofundum boonei... 141 8e-33 UniRef50_A6AKQ4 2'-5' RNA ligase n=3 Tax=Vibrio harveyi RepID=A6... 141 8e-33 UniRef50_A4XK57 2'-5' RNA ligase n=2 Tax=Clostridia RepID=A4XK57... 141 9e-33 UniRef50_A6CQH7 Putative uncharacterized protein n=1 Tax=Bacillu... 141 1e-32 UniRef50_C0ZGV0 Putative uncharacterized protein n=1 Tax=Breviba... 140 2e-32 UniRef50_A3UI27 Putative uncharacterized protein n=1 Tax=Oceanic... 140 2e-32 UniRef50_Q9K7T9 ABC transporter (Permease) n=1 Tax=Bacillus halo... 139 3e-32 UniRef50_C6CZ97 2'-5' RNA ligase n=1 Tax=Paenibacillus sp. JDR-2... 139 4e-32 UniRef50_A6FXB0 2',5' RNA ligase n=1 Tax=Plesiocystis pacifica S... 138 6e-32 UniRef50_C1YG14 2'-5' RNA ligase n=1 Tax=Nocardiopsis dassonvill... 138 6e-32 UniRef50_A6TLD2 2'-5' RNA ligase n=1 Tax=Alkaliphilus metallired... 138 7e-32 UniRef50_Q0F3T5 2`-5` RNA ligase, putative n=1 Tax=Mariprofundus... 138 8e-32 UniRef50_C8WMV6 2'-5' RNA ligase n=2 Tax=Coriobacteriaceae RepID... 137 1e-31 UniRef50_B7GK61 2'-5' RNA ligase n=1 Tax=Anoxybacillus flavither... 137 2e-31 UniRef50_Q65G06 2'_5' RNA ligase YtlP n=1 Tax=Bacillus lichenifo... 136 3e-31 UniRef50_C1CXY4 Putative 2`-5` RNA ligase n=1 Tax=Deinococcus de... 136 4e-31 UniRef50_D1Y2L4 2'-5' RNA ligase n=1 Tax=Pyramidobacter piscolen... 135 5e-31 UniRef50_C6PE45 2'-5' RNA ligase n=1 Tax=Thermoanaerobacterium t... 135 6e-31 UniRef50_B5Y8R2 2'-5' RNA ligase n=1 Tax=Coprothermobacter prote... 135 6e-31 UniRef50_C3BR82 2'-5' RNA ligase n=3 Tax=Bacillus RepID=C3BR82_9... 135 8e-31 UniRef50_A8G077 2'-5' RNA ligase n=1 Tax=Shewanella sediminis HA... 134 8e-31 UniRef50_A7VYB6 Putative uncharacterized protein n=1 Tax=Clostri... 134 9e-31 UniRef50_D2B7J8 2'-5' RNA ligase n=1 Tax=Streptosporangium roseu... 134 9e-31 UniRef50_D2S8G3 2'-5' RNA ligase n=1 Tax=Geodermatophilus obscur... 134 1e-30 UniRef50_Q6MIS1 Putative 2'-5' RNA ligase n=1 Tax=Bdellovibrio b... 134 1e-30 UniRef50_C4DT00 2'-5' RNA ligase n=1 Tax=Stackebrandtia nassauen... 134 1e-30 UniRef50_A0LR27 2'-5' RNA ligase n=1 Tax=Acidothermus cellulolyt... 134 1e-30 UniRef50_A9KM39 2'-5' RNA ligase n=1 Tax=Clostridium phytofermen... 133 2e-30 UniRef50_D0LIM3 2'-5' RNA ligase n=1 Tax=Haliangium ochraceum DS... 133 3e-30 UniRef50_Q7P1N0 2'-5' RNA ligase n=1 Tax=Chromobacterium violace... 131 8e-30 UniRef50_Q2NI02 Predicted 2'-5' RNA ligase n=1 Tax=Methanosphaer... 131 9e-30 UniRef50_A5UJ81 2'-5' RNA ligase, LigT n=3 Tax=Methanobrevibacte... 131 1e-29 UniRef50_Q6AKT9 Putative uncharacterized protein n=1 Tax=Desulfo... 131 1e-29 UniRef50_UPI000196B731 hypothetical protein CATMIT_00742 n=1 Tax... 130 2e-29 UniRef50_C7Q269 2'-5' RNA ligase n=1 Tax=Catenulispora acidiphil... 129 3e-29 UniRef50_C1P948 2'-5' RNA ligase n=1 Tax=Bacillus coagulans 36D1... 129 3e-29 UniRef50_C8WVE5 2'-5' RNA ligase n=2 Tax=Alicyclobacillus acidoc... 129 3e-29 UniRef50_A4BK99 2'-5' RNA ligase n=1 Tax=Reinekea blandensis MED... 128 9e-29 UniRef50_UPI00016981C7 2'''',5'''' RNA ligase n=1 Tax=Endoriftia... 127 1e-28 UniRef50_A0RYQ5 2'-5' RNA ligase n=1 Tax=Cenarchaeum symbiosum R... 127 2e-28 UniRef50_A1WW74 2'-5' RNA ligase n=1 Tax=Halorhodospira halophil... 126 3e-28 UniRef50_Q1Z4G8 Putative uncharacterized protein n=2 Tax=Photoba... 126 3e-28 UniRef50_C5CES3 2'-5' RNA ligase n=1 Tax=Kosmotoga olearia TBF 1... 126 3e-28 UniRef50_A1SDD3 2'-5' RNA ligase n=2 Tax=Nocardioidaceae RepID=A... 126 4e-28 UniRef50_C1TRT5 2'-5' RNA ligase n=1 Tax=Dethiosulfovibrio pepti... 125 6e-28 UniRef50_Q07Y05 Putative 2'-5' RNA ligase n=1 Tax=Shewanella fri... 123 2e-27 UniRef50_Q5FPP9 2'-5' RNA ligase n=1 Tax=Gluconobacter oxydans R... 123 3e-27 UniRef50_D2LR69 2'-5' RNA ligase n=1 Tax=Bacillus cellulosilytic... 122 4e-27 UniRef50_A1KCB4 2'-5' RNA ligase n=2 Tax=Betaproteobacteria RepI... 121 1e-26 UniRef50_C7HZ61 2'-5' RNA ligase n=1 Tax=Thiomonas intermedia K1... 120 2e-26 UniRef50_Q1BHE5 2',5' RNA ligase n=12 Tax=Burkholderiaceae RepID... 119 3e-26 Sequences not found previously or not previously below threshold: UniRef50_D2LH53 2'-5' RNA ligase n=1 Tax=Rhodomicrobium vannieli... 150 1e-35 UniRef50_Q8TVM2 2'-5' RNA ligase n=1 Tax=Methanopyrus kandleri R... 149 3e-35 UniRef50_Q1PYI6 Similar to 2'-5' RNA ligase n=1 Tax=Candidatus K... 149 4e-35 UniRef50_A7HSX7 2'-5' RNA ligase n=1 Tax=Parvibaculum lavamentiv... 148 6e-35 UniRef50_C8W3K6 2'-5' RNA ligase n=1 Tax=Desulfotomaculum acetox... 147 2e-34 UniRef50_Q2RN52 2',5' RNA ligase n=1 Tax=Rhodospirillum rubrum A... 145 5e-34 UniRef50_A4YHN8 2'-5' RNA ligase n=1 Tax=Metallosphaera sedula D... 144 1e-33 UniRef50_O26683 UPF0097 protein MTH_583 n=1 Tax=Methanothermobac... 143 3e-33 UniRef50_Q0W551 2'-5' RNA ligase n=1 Tax=uncultured methanogenic... 143 3e-33 UniRef50_UPI00016C441C 2''''-5'''' RNA ligase n=1 Tax=Gemmata ob... 143 3e-33 UniRef50_Q67NU4 Putative uncharacterized protein n=1 Tax=Symbiob... 142 5e-33 UniRef50_Q64CX2 TRNA nucleotidyltransferase n=2 Tax=environmenta... 142 5e-33 UniRef50_O66967 UPF0097 protein aq_768 n=2 Tax=Aquificaceae RepI... 141 9e-33 UniRef50_C7LNR7 2'-5' RNA ligase n=1 Tax=Desulfomicrobium bacula... 140 2e-32 UniRef50_B8GVT8 2'-5' RNA ligase n=2 Tax=Caulobacter vibrioides ... 139 3e-32 UniRef50_D1YUN2 2'-5' RNA ligase n=1 Tax=Methanocella paludicola... 139 4e-32 UniRef50_Q45633 UPF0097 protein in malA 3'region n=9 Tax=Bacteri... 139 4e-32 UniRef50_D2R085 2'-5' RNA ligase n=1 Tax=Pirellula staleyi DSM 6... 138 7e-32 UniRef50_B5HLE7 2',5' RNA ligase n=6 Tax=Streptomyces RepID=B5HL... 136 2e-31 UniRef50_UPI0001C41DA7 2''-5'' RNA ligase LigT n=1 Tax=Methanobr... 136 4e-31 UniRef50_A7H7I0 2'-5' RNA ligase n=4 Tax=Anaeromyxobacter RepID=... 136 4e-31 UniRef50_A3XCV9 2'-5' RNA ligase n=2 Tax=Rhodobacterales RepID=A... 136 4e-31 UniRef50_C6XKV8 2'-5' RNA ligase n=1 Tax=Hirschia baltica ATCC 4... 135 7e-31 UniRef50_Q0AXI9 Putative integral membrane transport protein n=1... 133 2e-30 UniRef50_A9HK09 2'-5' RNA ligase n=1 Tax=Gluconacetobacter diazo... 133 3e-30 UniRef50_A0NZS8 2'-5' RNA ligase n=2 Tax=Labrenzia RepID=A0NZS8_... 132 3e-30 UniRef50_B0VJL2 Putative uncharacterized protein n=1 Tax=Candida... 131 8e-30 UniRef50_Q5UY33 2'-5' RNA ligase n=1 Tax=Haloarcula marismortui ... 130 2e-29 UniRef50_D2L3I4 2'-5' RNA ligase n=1 Tax=Desulfovibrio sp. FW101... 129 4e-29 UniRef50_Q1CXV0 2'-5' RNA ligase n=1 Tax=Myxococcus xanthus DK 1... 129 5e-29 UniRef50_Q2RJJ7 2',5' RNA ligase n=1 Tax=Moorella thermoacetica ... 129 5e-29 UniRef50_O34570 UPF0097 protein ytlP n=2 Tax=Bacillus subtilis g... 128 6e-29 UniRef50_A8PKT4 2'-5' RNA ligase n=1 Tax=Rickettsiella grylli Re... 128 9e-29 UniRef50_Q2B4M3 Putative uncharacterized protein n=1 Tax=Bacillu... 128 9e-29 UniRef50_B6J032 2'-5' RNA ligase n=6 Tax=Coxiella burnetii RepID... 127 1e-28 UniRef50_B9XIZ0 2'-5' RNA ligase n=1 Tax=bacterium Ellin514 RepI... 127 2e-28 UniRef50_Q02C89 2'-5' RNA ligase n=1 Tax=Candidatus Solibacter u... 127 2e-28 UniRef50_C9N809 2'-5' RNA ligase n=2 Tax=Streptomyces RepID=C9N8... 126 3e-28 UniRef50_Q21UK0 2',5' RNA ligase n=1 Tax=Rhodoferax ferrireducen... 126 3e-28 UniRef50_Q5WE85 Putative uncharacterized protein n=1 Tax=Bacillu... 124 9e-28 UniRef50_D1A6E1 2'-5' RNA ligase n=1 Tax=Thermomonospora curvata... 123 2e-27 UniRef50_Q2BKJ4 Putative uncharacterized protein n=1 Tax=Neptuni... 122 4e-27 UniRef50_A2SQE0 2'-5' RNA ligase n=1 Tax=Methanocorpusculum labr... 122 7e-27 UniRef50_D1WYH2 2'-5' RNA ligase n=2 Tax=Streptomyces RepID=D1WY... 121 7e-27 UniRef50_B3T5E4 Putative uncharacterized protein n=1 Tax=uncultu... 121 8e-27 UniRef50_UPI0001C42779 2''-5'' RNA ligase n=1 Tax=Bacillus pseud... 121 8e-27 UniRef50_C5RP17 2'-5' RNA ligase n=1 Tax=Clostridium cellulovora... 121 9e-27 UniRef50_D1B782 2'-5' RNA ligase n=1 Tax=Thermanaerovibrio acida... 121 1e-26 UniRef50_A7I913 2'-5' RNA ligase n=1 Tax=Candidatus Methanoregul... 120 2e-26 UniRef50_B4V712 2'-5' RNA ligase n=2 Tax=Streptomyces RepID=B4V7... 120 2e-26 UniRef50_A9ILF3 ABC transporter (Permease) n=4 Tax=Bartonella Re... 120 2e-26 >UniRef50_P37025 2'-5'-RNA ligase n=156 Tax=Enterobacteriaceae RepID=LIGT_ECOLI Length = 176 Score = 249 bits (636), Expect = 3e-65, Method: Composition-based stats. Identities = 176/176 (100%), Positives = 176/176 (100%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL 60 MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL Sbjct: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL 60 Query: 61 SLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 SLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR Sbjct: 61 SLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 Query: 121 PFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ 176 PFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ Sbjct: 121 PFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ 176 >UniRef50_Q3JCL1 2',5' RNA ligase n=2 Tax=Nitrosococcus oceani RepID=Q3JCL1_NITOC Length = 177 Score = 184 bits (468), Expect = 9e-46, Method: Composition-based stats. Identities = 61/174 (35%), Positives = 79/174 (45%), Gaps = 2/174 (1%) Query: 3 EPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSL 62 E QRLFFA+ AEIREQ A + G+ V ++NLHLTL FLG + ++ Sbjct: 6 ETQRLFFALWPGAEIREQATQI-AQRMLGKRGKCVRSENLHLTLVFLGSTTEQQRACAEA 64 Query: 63 LAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 +A I F L L+ G W R RVVWL R+ P+ LI+L L G RP+ Sbjct: 65 VADTIEGTAFALRLEQIGYWSRPRVVWLAPRETPQPLIELVQQLNQGLTACGYQPEARPY 124 Query: 123 HPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ 176 H+TL R + + V F L S G Y L+ W L Q Sbjct: 125 RAHMTLARKVAGYFPAREVA-PLACPVEHFYLVRSVSYPGGVEYQVLRSWPLAQ 177 >UniRef50_B5YF63 2'-5' RNA ligase n=2 Tax=Dictyoglomus RepID=B5YF63_DICT6 Length = 194 Score = 181 bits (460), Expect = 8e-45, Method: Composition-based stats. Identities = 47/181 (25%), Positives = 82/181 (45%), Gaps = 9/181 (4%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAG--RPVAADNLHLTLAFLGEVSAEKEKALSL 62 +RLF AI+L I++ I+ ++ G + V +N HLT+ FLGE + Sbjct: 13 RRLFIAIELEDSIKDHILSFQKELKNSVLGDVKWVERENFHLTIKFLGETPENLIDDIKS 72 Query: 63 LAGRIR--QPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQ 117 + F ++L+ G + RV+W+G+ + GL ++ + + + + G + Sbjct: 73 ILDETSYYFEPFYISLEGFGAFPSLKSPRVLWIGIEEGLDGLEKVFDFIEKRLVKKGFRK 132 Query: 118 SNRPFHPHITLLRDASEAVT-IPPPGFNWSYA-VTEFTLYASSFARGRTRYTPLKRWALT 175 +RPF PH+TL R V + F+ V+ TL+ S YTP+ R L Sbjct: 133 EDRPFSPHLTLGRVKDRDVRILKDLLFDKEVVLVSSITLFESKLTPEGPIYTPIYRVNLG 192 Query: 176 Q 176 + Sbjct: 193 K 193 >UniRef50_D1CCP6 2'-5' RNA ligase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CCP6_THET1 Length = 194 Score = 179 bits (455), Expect = 3e-44, Method: Composition-based stats. Identities = 53/191 (27%), Positives = 78/191 (40%), Gaps = 15/191 (7%) Query: 1 MSEPQ-RLFFAIDLPAEIREQIIHWRATHFPPEAG-RPVAADNLHLTLAFLGEVSAEKEK 58 MS+ + RLF AID+P IR + + G + V N+HLTL FLG+VS + Sbjct: 1 MSDDKARLFLAIDIPKSIRSILYDLGRSGLAGSTGLKWVEESNIHLTLKFLGDVSRSQID 60 Query: 59 ALSLLAGRIRQP-GFTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANMLRSQAARSG 114 A+ + I P L + G + R RV+W G+ L L + + AR G Sbjct: 61 AIQDVLEDITCPDSIGLEIRGLGIFGNLRRPRVLWAGVSGDIEALRLLHQEVEDKCARLG 120 Query: 115 CFQSNRPFHPHITLLRDASEAVTIPPPGFNW---------SYAVTEFTLYASSFARGRTR 165 + + PH+TL R P S+ LY S+ Sbjct: 121 FDRDVMEYRPHVTLARFKESFADTPSLRRLLGANNDVSLGSFIAESMVLYQSTLLPSGPV 180 Query: 166 YTPLKRWALTQ 176 YTP+K + L + Sbjct: 181 YTPVKTFNLIE 191 >UniRef50_B5YJG0 2'-5' RNA ligase n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YJG0_THEYD Length = 186 Score = 179 bits (455), Expect = 4e-44, Method: Composition-based stats. Identities = 45/187 (24%), Positives = 76/187 (40%), Gaps = 16/187 (8%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF AI++P EI+E + + V N H+TL FLGEV+ ++ Sbjct: 1 MRLFIAIEIPDEIKEFLYQLIYLKTSLDGVSIVQKGNFHITLKFLGEVNEGLIPDITNTL 60 Query: 65 GRIR--QPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 +I FTL + G + + RV+W+G + L ++A + + G + + Sbjct: 61 RKISNGFSPFTLKITHPGVFPDKFKPRVIWIG-TENTDSLKEMAKRIDEEMESLGFKRED 119 Query: 120 RPFHPHITLLRDASEA----------VTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPL 169 + F HIT+ R + + V EF L S+ + Y L Sbjct: 120 KNFKSHITVARVKNFHNGKYLFEKILKKFSGESSQLKFQVEEFVLMKSTLTPKGSIYDVL 179 Query: 170 KRWALTQ 176 +R+ L + Sbjct: 180 QRFPLVK 186 >UniRef50_Q60BS9 Putative 2'-5' RNA ligase n=1 Tax=Methylococcus capsulatus RepID=Q60BS9_METCA Length = 190 Score = 179 bits (454), Expect = 4e-44, Method: Composition-based stats. Identities = 60/164 (36%), Positives = 80/164 (48%) Query: 8 FFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAGRI 67 FFA+ A +RE + + GR V D LHLTLAFLG V AE+ L+ + G + Sbjct: 14 FFALWPDAGVRETLGRLVRSLRRTVKGRWVEPDKLHLTLAFLGAVPAERLPELTAMTGDL 73 Query: 68 RQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPHIT 127 P F L LD W R+RV+ LG P LI+L +L S+ R+G RPF PH+T Sbjct: 74 DLPPFELALDRLEYWQRNRVLCLGASATPPLLIELVGILNSKLGRAGFPVERRPFRPHLT 133 Query: 128 LLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKR 171 L R A A + P + ++ V TL S +R Y Sbjct: 134 LARKAEAAWSAMPLKTSVTWPVDRVTLVESRLSRAGPLYLVRAE 177 >UniRef50_A4BU36 2'-5' RNA ligase, putative n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BU36_9GAMM Length = 197 Score = 177 bits (450), Expect = 1e-43, Method: Composition-based stats. Identities = 52/173 (30%), Positives = 73/173 (42%), Gaps = 4/173 (2%) Query: 2 SEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALS 61 + QRLF A+ +R + P GR V +NLH+TLAFLG+V E + Sbjct: 8 GDTQRLFLALWPDEGVRCAVARLARRLVPD--GRLVPPENLHVTLAFLGDVPGEAMPRVR 65 Query: 62 LLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 + + F L LD G W R R+ W+ P L +L LR ++G +R Sbjct: 66 AIGANLVGATFALELDRIGCWPRPRISWIAPSHTPAVLGRLNRELRQVLRKAGFPVPSRR 125 Query: 122 FHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 F PH+TL R ++ + + TL S R RY L W L Sbjct: 126 FAPHMTLARRSAPHAFHDVTP--VVWPIERITLIRSHLERAGARYEILCEWPL 176 >UniRef50_Q2Y753 2',5' RNA ligase n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y753_NITMU Length = 195 Score = 175 bits (445), Expect = 4e-43, Method: Composition-based stats. Identities = 57/172 (33%), Positives = 80/172 (46%), Gaps = 4/172 (2%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLFFAI E Q+ GR A+N+HLTL F+GEV+A + +AL A Sbjct: 11 RLFFAIWPDKETCMQLDRLTGRLASVCEGRKTKAENIHLTLVFVGEVNASQVEALCRAAD 70 Query: 66 RIRQP---GFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 I F L ++ W R +V+ + + PR L+ L L+S + G R + Sbjct: 71 EIEGHGVRAFDLVIERICVWKRKNIVYAEINEVPRPLMDLVEALQSSLSLVGFSLEERSY 130 Query: 123 HPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 PHITL+R+AS T+P + E+ L S YTP+ RW L Sbjct: 131 KPHITLMRNAS-CKTLPERAEPMVWRAREWVLVKSDQTSDGPVYTPIGRWFL 181 >UniRef50_A1AS05 2'-5' RNA ligase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AS05_PELPD Length = 186 Score = 174 bits (442), Expect = 9e-43, Method: Composition-based stats. Identities = 63/180 (35%), Positives = 87/180 (48%), Gaps = 14/180 (7%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF AIDLP +R+ + + P R V AD LHLTLAFLG+V E+ L+ Sbjct: 3 RLFIAIDLPEVVRQDLCRL---NVPIPGSRWVPADQLHLTLAFLGDVGEERVAGLARALD 59 Query: 66 RIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 ++ F L D G + R RV+W+G++ P L+ LA+ LR Q RPF Sbjct: 60 QVSAAPFRLRFDRLGCFPSRARPRVLWVGLK-PEPLLLSLADRLREFLRDCCIPQEERPF 118 Query: 123 HPHITL-------LRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALT 175 PHITL R+ + + P S + EF L+ S +TPLKR+ L+ Sbjct: 119 SPHITLARLKLPAARECASFLDRPLALERTSVSAQEFILFESLLTAAGAIHTPLKRFPLS 178 >UniRef50_Q5NYK1 2'-5' RNA ligase n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NYK1_AZOSE Length = 201 Score = 174 bits (441), Expect = 1e-42, Method: Composition-based stats. Identities = 54/175 (30%), Positives = 76/175 (43%), Gaps = 5/175 (2%) Query: 2 SEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALS 61 +P R+FFA+ A + +++ A GR + LHLTLAF+G+VS ++ L Sbjct: 9 GKPSRVFFALWPDARVAKRLDELGAEAHAECGGRRTRCETLHLTLAFIGDVSPQRLAELI 68 Query: 62 LLAGRIR----QPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQ 117 + +R FTL LD G W +R+VW G + P L L L + Sbjct: 69 AVGNEVRNDREATSFTLRLDLLGSWRHNRIVWAGAQSCPAPLAGLVERLNGALEAADFAV 128 Query: 118 SNRPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRW 172 RPF PH+TLLR A V+ + V F L S Y L+ W Sbjct: 129 ERRPFAPHVTLLRKAHTQVSTRCVD-PIDWPVDGFVLVESVQTSTGAHYRTLREW 182 >UniRef50_Q1QSH4 2',5' RNA ligase n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QSH4_CHRSD Length = 174 Score = 173 bits (440), Expect = 2e-42, Method: Composition-based stats. Identities = 51/170 (30%), Positives = 70/170 (41%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL 60 M+ +RLFFA+ R + P G P+ A+N+H+TLAFLG V + L Sbjct: 1 MTVSRRLFFALWPDDTTRRALAAEAQRLAPLCGGYPLPAENMHITLAFLGNVDEARIAPL 60 Query: 61 SLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 LA TLD G + + R+VW G + L+ L L AR G R Sbjct: 61 VALAQAWPALQGEWTLDRLGHFPKPRIVWAGSQASSPELMALDAELWQALARHGFTAPQR 120 Query: 121 PFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLK 170 F PH++L+R A A + L S G +RY L Sbjct: 121 DFTPHVSLVRQADRAAPASRLPTPIRWRFDRLALVESQLDNGGSRYRTLA 170 >UniRef50_C8SB57 2'-5' RNA ligase n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8SB57_FERPL Length = 179 Score = 173 bits (438), Expect = 3e-42, Method: Composition-based stats. Identities = 49/182 (26%), Positives = 78/182 (42%), Gaps = 13/182 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF A+DL E+RE+I T + V +NLH+TL FLGEV E+ A+ Sbjct: 1 MRLFIAVDLSEELREKIAPILKTISELNGVKAVERENLHITLKFLGEVREERLPAIVEAL 60 Query: 65 GRIRQPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 ++ F + L G + +RV W+G+++ L +LA + S + G Sbjct: 61 KKVEFEPFKIYLKGFGFFPNDRYARVAWIGVKEGEEELKKLAESINSALKKVGFKPE--S 118 Query: 122 FHPHITLLRDAS-------EAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 F H+T+ R E + F W V +F L S+ Y L+ + + Sbjct: 119 FTAHVTIARVKKPEGRRIVEILRDLEDDFGW-MEVKDFRLKKSTLTSKGPIYEDLEVYGV 177 Query: 175 TQ 176 + Sbjct: 178 VK 179 >UniRef50_B6IVY2 2'-5' RNA ligase, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6IVY2_RHOCS Length = 204 Score = 172 bits (437), Expect = 4e-42, Method: Composition-based stats. Identities = 50/181 (27%), Positives = 74/181 (40%), Gaps = 15/181 (8%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF + LP R+++ R V +N HLTL F+GEV + + Sbjct: 2 IRLFVGLPLPEASRDRLARL---GPGFPGVRRVPPENFHLTLRFIGEVDEGTAQDIDAAL 58 Query: 65 GRIRQPGFTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 + P F L L+ GQ+ R R +W G+ + L L + + S R+G R Sbjct: 59 DLVTAPPFPLMLEGLGQFGRGGRPRALWAGVAR-SEALAHLRDKVESAVVRAGQPAEERR 117 Query: 122 FHPHITLLRDASEAVTIPPPGF--------NWSYAVTEFTLYASSFARGRTRYTPLKRWA 173 F PH+TL R +EA F V F L+ S +G + Y L+ + Sbjct: 118 FMPHVTLARLTAEAPAHRIGRFIAENGLFREGPLPVDRFVLFESVLGKGGSIYHELRSYP 177 Query: 174 L 174 L Sbjct: 178 L 178 >UniRef50_C4ZJW1 2'-5' RNA ligase n=1 Tax=Thauera sp. MZ1T RepID=C4ZJW1_THASP Length = 186 Score = 171 bits (433), Expect = 1e-41, Method: Composition-based stats. Identities = 57/173 (32%), Positives = 77/173 (44%), Gaps = 1/173 (0%) Query: 4 PQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 RLFFA+ A R + GR + D +HLTLAFLGE + + L + Sbjct: 13 NLRLFFALWPDAATRAGLHARARALHSECGGRAMRRDTIHLTLAFLGETPVRQVERLRAV 72 Query: 64 AGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 A ++ GF L LD G W R+R++W G P L LA L + GC R F Sbjct: 73 AAGVQGEGFALDLDRVGSWHRNRILWTGPSMVPPALAALAQDLEGRLRADGCALEARAFS 132 Query: 124 PHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ 176 PH+TL+R+A A + V F L AS + Y + RW L + Sbjct: 133 PHVTLVRNAHAAPREAQLA-PLRWTVGSFVLVASELSAAGAHYRTIGRWPLKR 184 >UniRef50_A8U4H0 2'-5' RNA ligase n=1 Tax=alpha proteobacterium BAL199 RepID=A8U4H0_9PROT Length = 196 Score = 170 bits (432), Expect = 2e-41, Method: Composition-based stats. Identities = 50/183 (27%), Positives = 71/183 (38%), Gaps = 15/183 (8%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF AI +P + + + + + R V D+ HLTL F+G+V L Sbjct: 1 MRLFVAIAMPEAVADPLCDLQGGL---DGARWVDPDDFHLTLRFIGDVDRGTADDLVATL 57 Query: 65 GRIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 + P F L L G + R R +W G+ +P L L + S A R+G R Sbjct: 58 SSLHAPAFDLRLSGLGHFGSGHRLRALWAGV-EPQPALTLLHGRVESAARRAGLPPEGRR 116 Query: 122 FHPHITLLR--------DASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWA 173 F PH+TL R AS + P + V E L+ S R Y Sbjct: 117 FVPHVTLARMSGPISDDSASHWIGSRSPFVAGPFPVREVVLFESFLGREGPHYERRLVVP 176 Query: 174 LTQ 176 L + Sbjct: 177 LDR 179 >UniRef50_Q39PT9 2',5' RNA ligase n=4 Tax=Geobacter RepID=Q39PT9_GEOMG Length = 184 Score = 170 bits (432), Expect = 2e-41, Method: Composition-based stats. Identities = 55/180 (30%), Positives = 74/180 (41%), Gaps = 14/180 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF AIDLP E++ + R + D LHLTL F+GE A+ Sbjct: 1 MRLFVAIDLPDEVKRSVADICR---GVPGVRWLPPDQLHLTLRFIGEEDDAVAAAIRRGL 57 Query: 65 GRIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 I P F L+L G + R RV+W+G+ L QL + + +G RP Sbjct: 58 AEITSPPFPLSLQGVGCFPSPRRPRVLWVGLSGGAP-LQQLQQKVEAAMVAAGILAEERP 116 Query: 122 FHPHITLL--RDASEAVTIPPPGFNWSYA-----VTEFTLYASSFARGRTRYTPLKRWAL 174 F PHITL R+ E P N S+ V F LY+S A + + L Sbjct: 117 FSPHITLARLREHREGDVAPFLARNASFHCEPFTVDAFHLYSSILAAKGAIHRHEASYPL 176 >UniRef50_Q3SK36 2',5' RNA ligase n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SK36_THIDA Length = 183 Score = 169 bits (430), Expect = 3e-41, Method: Composition-based stats. Identities = 54/173 (31%), Positives = 74/173 (42%), Gaps = 2/173 (1%) Query: 4 PQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 RLFFA+ R+ + GR + A+ LH+TLAFLG A++ AL Sbjct: 11 SLRLFFALWPDDATRDALDRTGKWLHRHWGGRRMRAETLHITLAFLGTTPADRLDALIGC 70 Query: 64 AGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 A I F L LD G W + V WLG + P + L L + G R Sbjct: 71 ADGIAAEPFALVLDRPGYWRHNHVGWLGASEAPPPHLALVTALNAALQAGGFPVDARAHV 130 Query: 124 PHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ 176 PH+TLLR+ + P S+AV +F L S +Y ++RW L Sbjct: 131 PHVTLLRNTAGGDL--PLCRPVSWAVPDFVLVRSRTDPTGAQYEVIRRWLLVH 181 >UniRef50_A3DNW5 2'-5' RNA ligase n=1 Tax=Staphylothermus marinus F1 RepID=A3DNW5_STAMF Length = 193 Score = 169 bits (428), Expect = 4e-41, Method: Composition-based stats. Identities = 47/181 (25%), Positives = 73/181 (40%), Gaps = 13/181 (7%) Query: 2 SEPQRLFFAID-LPAEIREQIIHWRATHFPPEAG-RPVAADNLHLTLAFLGEVSAEKEKA 59 E R+F AID L + +Q+ R +A +PVA +N+H+TL F+GE + Sbjct: 6 GENLRVFVAIDILEPNVLDQLSKIRDLLLESKADLKPVATENMHITLRFIGETPLHLVNS 65 Query: 60 LSLLAGRIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCF 116 + G+I F + + G + R RV+W G+ Q L +L +++ + G Sbjct: 66 ICNDLGKIEFEPFKIRIKGVGVFPNIARPRVIWAGVSQGVENLSKLHDIVEKILRKHGVP 125 Query: 117 QSNRPFHPHITLLRDA-----SEAVTIPPPGFNWSY---AVTEFTLYASSFARGRTRYTP 168 F PHITL R S V I + + V L S Y Sbjct: 126 PQREKFIPHITLARVKSGRNISRLVKIIESIADTDFGEVLVDRIVLKRSILTPSGPIYRD 185 Query: 169 L 169 + Sbjct: 186 I 186 >UniRef50_A6EV98 2',5' RNA ligase n=1 Tax=Marinobacter algicola DG893 RepID=A6EV98_9ALTE Length = 190 Score = 169 bits (428), Expect = 4e-41, Method: Composition-based stats. Identities = 49/181 (27%), Positives = 83/181 (45%), Gaps = 13/181 (7%) Query: 3 EPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSL 62 E RLFF +++P ++++++ + P R D LHLTL FLG V+ ++ + Sbjct: 5 ETHRLFFGLEIPDLVKQRLVSIQQ---PVAGARWQRPDQLHLTLVFLGSVARQRLPDVCD 61 Query: 63 LAGRIRQPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 A + F LT+ G + R + +W G+ QP L +L +L + G Q Sbjct: 62 AARNLPVEQFDLTVCGLGCFGRPDFPKNLWAGV-QPADTLAELHEVLNQRLCMPGFEQEK 120 Query: 120 RPFHPHITLLRDA------SEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWA 173 RPF PHITL R +E + +++V L+ S+ + Y ++R+ Sbjct: 121 RPFCPHITLSRFKGQRGSVAELLEFQERQPVGTFSVDGIALFESTQGAYGSVYQIIERFP 180 Query: 174 L 174 L Sbjct: 181 L 181 >UniRef50_Q1IPR0 2',5' RNA ligase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IPR0_ACIBL Length = 190 Score = 168 bits (426), Expect = 8e-41, Method: Composition-based stats. Identities = 58/193 (30%), Positives = 86/193 (44%), Gaps = 25/193 (12%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLFFA+D+P+EIR + + + R +A ++ H+TL FLGEV + + Sbjct: 1 MRLFFALDIPSEIRRSLTDYVDSLRRVPGVRFMAPESYHVTLKFLGEV--QDVERAKSAV 58 Query: 65 GRIRQPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 +R P F + D G + RV W G+ GL LA L A++G + +RP Sbjct: 59 ATVRSPRFEVAFCDVGFFPNAKAPRVFWAGIHAD-EGLPNLATALEDALAQAGFPREDRP 117 Query: 122 FHPHITLLRDASEAVT-------------------IPPPGFNWSYAVTEFTLYASSFARG 162 FHPH+TL R+ S + PP + +EF LY S + Sbjct: 118 FHPHLTLARNGSGSPRPRGDEQPVAGFRALVYLAEKNPPPEFGTMTASEFFLYESKLSPR 177 Query: 163 RTRYTPLKRWALT 175 +Y L R+ LT Sbjct: 178 GAQYNKLARFPLT 190 >UniRef50_Q47EL0 2',5' RNA ligase n=1 Tax=Dechloromonas aromatica RCB RepID=Q47EL0_DECAR Length = 193 Score = 167 bits (424), Expect = 1e-40, Method: Composition-based stats. Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 7/174 (4%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 R+FFA+ AE+ +++ GR + +HLTLAFLGEV + L ++A Sbjct: 17 RVFFALWPSAEVADRLADMAGKAVASFGGRATRRETIHLTLAFLGEVPESRLPELCVVAD 76 Query: 66 RIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQ--SNRPFH 123 ++ FT++LD G W + ++W G + P L +L LR A +G + F Sbjct: 77 GVQGQSFTMSLDRLGFWRHNHLLWAGSQAPVASLGELVGRLRHALANAGFKVDTEQQGFV 136 Query: 124 PHITLLRDASEAVTIP-----PPGFNWSYAVTEFTLYASSFARGRTRYTPLKRW 172 PH+TL+R + + P + ++ F L SS + + Y L+ + Sbjct: 137 PHVTLVRKIPASAGLLENQQFPSFESLAWRADRFVLVRSSLSPSGSEYLILREF 190 >UniRef50_Q0AGI2 2'-5' RNA ligase n=2 Tax=Nitrosomonas RepID=Q0AGI2_NITEC Length = 177 Score = 167 bits (423), Expect = 2e-40, Method: Composition-based stats. Identities = 55/174 (31%), Positives = 78/174 (44%), Gaps = 2/174 (1%) Query: 2 SEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALS 61 + P RLF A+ R+Q+ +GR + NLHLTLAF+GE+ L Sbjct: 5 AHPVRLFLALWPQDIARDQLAKLARQLADDCSGRCIQPKNLHLTLAFMGEIDQGNIPRLC 64 Query: 62 LLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN-R 120 A IRQ F LTLD W ++ VV G Q P L L L+ + + Sbjct: 65 QAAPAIRQSPFNLTLDKVCFWKKAGVVVAGTSQCPAELTTLVQDLQHLLSALRIRYDDTY 124 Query: 121 PFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 PF PH+TL+R+ ++P + VT+++L S + Y L WAL Sbjct: 125 PFTPHVTLVRNVRHC-SLPDSIQAIDWPVTQWSLAQSRQTPYESVYQSLADWAL 177 >UniRef50_B5E8F5 2'-5' RNA ligase n=3 Tax=Geobacter RepID=B5E8F5_GEOBB Length = 184 Score = 166 bits (421), Expect = 3e-40, Method: Composition-based stats. Identities = 48/177 (27%), Positives = 73/177 (41%), Gaps = 14/177 (7%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF AIDLP EI+ + R VA +HLTL F+G+V + + Sbjct: 3 RLFVAIDLPEEIKASLSQL---SCAVTGARWVAPSEIHLTLRFIGDVDPQTVSKIEKALS 59 Query: 66 RIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 ++ P F L + G + RV+W+G+ +P LI L + S +G +RPF Sbjct: 60 AVQFPSFPLRVAGVGHFPARGYPRVLWVGL-EPHPELIALQQRIESALQPAGVSPEDRPF 118 Query: 123 HPHITLLRDASEAVTIPPPGFNW-------SYAVTEFTLYASSFARGRTRYTPLKRW 172 PHITL R + + TE+ LY+S + + + Sbjct: 119 SPHITLARLKETPPAAVAAFESLHRGLAYPPFPATEYVLYSSVLTPKGAIHRKEEVF 175 >UniRef50_A1HSF5 2'-5' RNA ligase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSF5_9FIRM Length = 182 Score = 165 bits (419), Expect = 5e-40, Method: Composition-based stats. Identities = 49/182 (26%), Positives = 79/182 (43%), Gaps = 12/182 (6%) Query: 5 QRLFFAIDLPAEIREQIIHWRA-THFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 RLF I+ P +I +++ + +GR A N+HLTL FLGEV+ +K + Sbjct: 1 MRLFIGIEFPEDILDKLGQTQDYLRRYVSSGRFTAKHNMHLTLQFLGEVAEDKVGDICRC 60 Query: 64 AGRI--RQPGFTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQS 118 ++ L L G + ++ RVVW+G+ L +L + G Sbjct: 61 LQQVAKEHSPLRLALGALGCFGQNNPYRVVWVGLGGDLTALNRLQRAIVLGMKDLGFIPE 120 Query: 119 NRPFHPHITLLRDA------SEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRW 172 NRP+ PHITL RD + + S++V F+L +S+ + Y L + Sbjct: 121 NRPYKPHITLARDVWFTDAQAYQQALRLTAGGTSFSVKSFSLISSAVEEKKRVYRSLATF 180 Query: 173 AL 174 L Sbjct: 181 EL 182 >UniRef50_Q9X2H4 UPF0097 protein TM_1860 n=9 Tax=Thermotogaceae RepID=Y1860_THEMA Length = 187 Score = 165 bits (419), Expect = 5e-40, Method: Composition-based stats. Identities = 50/178 (28%), Positives = 78/178 (43%), Gaps = 13/178 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGR-PVAADNLHLTLAFLGEVSAEKEKALSL- 62 R F AID+ E+++Q G V+ +N+HLTL FLGEV +K ++ Sbjct: 1 MRTFIAIDVNEEVKKQASEIIEKLMKRGFGATWVSEENMHLTLFFLGEVDEQKISEIAEH 60 Query: 63 LAGRIR-QPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQS 118 L R+R P F+ T+ G + R RV WLG+ + L++L LR++ + G Sbjct: 61 LCRRVRGFPSFSFTVKGFGYFKRKMSPRVFWLGV-ENTDRLMKLYEELRNELSHHGFSFE 119 Query: 119 NRPFHPHITLLRDASEAVTIPPPGFNWSYA-----VTEFTLYASSFARGRTRYTPLKR 171 + F PHIT+ R + + V F +Y+S+ Y L Sbjct: 120 EK-FVPHITIGRVKYYPDKWEKLIEDIDFPPIEVAVDRFKIYSSTLTPTGPIYKVLYE 176 >UniRef50_B8GQV2 2'-5' RNA ligase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GQV2_THISH Length = 188 Score = 165 bits (419), Expect = 5e-40, Method: Composition-based stats. Identities = 66/175 (37%), Positives = 82/175 (46%), Gaps = 8/175 (4%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL 60 + PQRLFFA+ E R + WR P GRP AA NLHLTLAF G+V AE L Sbjct: 5 LDTPQRLFFALWPSDEARAALAGWRDA-LPRPGGRPTAARNLHLTLAFAGDVDAETRTCL 63 Query: 61 SLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 A R+R F+L LD G + R ++W G P L LA L G Sbjct: 64 EQAAARVRGEPFSLPLDRLGVFKR-GLLWTGPADCPAALSTLAGDLAGVLRDCGVRPDPC 122 Query: 121 PFHPHITLLRDAS-EAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 PFH HITL+R + + PPG ++ F L S +G Y LK + L Sbjct: 123 PFHAHITLIRRMNGRLPGVDPPGL--TWQAKAFCLVRSRPGQG---YEVLKTYPL 172 >UniRef50_C4L922 2'-5' RNA ligase n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L922_TOLAT Length = 178 Score = 165 bits (418), Expect = 6e-40, Method: Composition-based stats. Identities = 59/170 (34%), Positives = 78/170 (45%), Gaps = 4/170 (2%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 +RLFFA+ + + H + +PV A+N HLTL FLG L +A Sbjct: 3 RRLFFALP-AQSVASALHHCQQQLHEEGHRKPVNANNFHLTLHFLGMQDEHILPQLYQVA 61 Query: 65 GRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHP 124 +R P F LTLD G + + +WLG + P L+ L N L + G S + P Sbjct: 62 AELRSPPFELTLDQYGLFRHAHCLWLGPQHPAPPLLHLVNRLGESLTQLGLPVST-DYRP 120 Query: 125 HITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 HITL R+A P P V+EF LY S A Y PL+RW L Sbjct: 121 HITLFRNARAMTQCPAPALRLQ--VSEFILYESISAADGVWYKPLRRWPL 168 >UniRef50_A5D3U3 2'-5' RNA ligase n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D3U3_PELTS Length = 193 Score = 165 bits (418), Expect = 6e-40, Method: Composition-based stats. Identities = 49/189 (25%), Positives = 74/189 (39%), Gaps = 16/189 (8%) Query: 3 EPQRLFFAIDLPAEIREQIIHWRATHFP-PEAGRPVAADNLHLTLAFLGEVSAEKEKALS 61 RLF A++ P +I++ + P + V NLHLTL FLG V AE+ +++ Sbjct: 2 RQMRLFIAVNFPEQIKKALGAIIGELRQLPSDAKWVEEHNLHLTLQFLGNVPAEQVDSIA 61 Query: 62 LLAGRIRQ--PGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCF 116 GR F L L+ G + R RV+W G+ L +L + ++++ + G Sbjct: 62 AALGRSAAGVAPFRLNLNGVGVFPSRARPRVLWAGVSGETAVLSRLQHRVQTELGQLGFP 121 Query: 117 QSNRPFHPHITLLRDASEAVTIPPPGFNWSY----------AVTEFTLYASSFARGRTRY 166 R F PH+TL R S A + L S Y Sbjct: 122 AEKRQFSPHLTLARFRSPAGFSAVMERAEEIVRGLDKFGSAVIDSVELMLSELGARGPSY 181 Query: 167 TPLKRWALT 175 L R L+ Sbjct: 182 FVLARTPLS 190 >UniRef50_Q0BV79 2'-5' RNA ligase n=2 Tax=Acetobacteraceae RepID=Q0BV79_GRABC Length = 212 Score = 164 bits (417), Expect = 7e-40, Method: Composition-based stats. Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 13/180 (7%) Query: 4 PQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 P RLF +DLP +++++ + R ++ +N HLTL F+G+V + L L Sbjct: 36 PMRLFVGLDLPWILKDELYGI---AYGLPGARWISPENYHLTLRFIGDVPGHRADELDLA 92 Query: 64 AGRIRQPGFTLTLDDAGQWLRSR--VVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 +R GF+L L G + R+ +++G+ + P+ L L N + + R G R Sbjct: 93 LSTLRARGFSLVLTGIGIFERAGRSTLYVGVEKNPQ-LDHLQNKIETGLQRVGLPPERRR 151 Query: 122 FHPHITLLRDASEAVTIPP-------PGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 F PH+TL R A V FTL++S + ++ YT +AL Sbjct: 152 FMPHVTLARLDGTADNRLASYVQSHNLFRTDPIPVEHFTLFSSQLGKEQSVYTVEADYAL 211 >UniRef50_O28125 UPF0097 protein AF_2157 n=1 Tax=Archaeoglobus fulgidus RepID=Y2157_ARCFU Length = 176 Score = 164 bits (417), Expect = 8e-40, Method: Composition-based stats. Identities = 44/178 (24%), Positives = 75/178 (42%), Gaps = 11/178 (6%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF A+D+ IRE++ + V +NLH+TL FLGEV EK + Sbjct: 1 MRLFVAVDVDDSIREKVKPILKELSGVSGVKAVEPENLHITLLFLGEVGEEKLARIEERL 60 Query: 65 GRIRQPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 + F ++ + G + RVVW+G+++ L +LAN + + + G + + Sbjct: 61 SEVTFQPFKISFEGVGAFPNPGSPRVVWIGVKEEGE-LTRLANSVYEKLKKLGFRRD-KD 118 Query: 122 FHPHITLLRDASEAVTIPPPGFNWS------YAVTEFTLYASSFARGRTRYTPLKRWA 173 F H+T+ R + + +S V +F L S Y L+ + Sbjct: 119 FKAHLTVGRVKRKNPEVADIVRKYSSESFGEMEVRDFRLKQSILTPKGPIYKDLRVFE 176 >UniRef50_C7R810 2'-5' RNA ligase n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R810_KANKD Length = 183 Score = 164 bits (416), Expect = 1e-39, Method: Composition-based stats. Identities = 53/170 (31%), Positives = 77/170 (45%), Gaps = 6/170 (3%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLFFAIDLP + Q+ + P AGRPV+ N H+TL FLGE+ + + Sbjct: 3 RLFFAIDLPQAHKNQLELLQRQC--PFAGRPVSPHNFHITLLFLGELPDNQLGDILDAIE 60 Query: 66 RIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCF--QSNRPFH 123 F + L + ++ V L + P LI+L +R ++G N+PF Sbjct: 61 VPVIKPFEIKLKQFAYYPKAEVGCLEV-APNEQLIELHQHIRKNLKQAGIHIKLPNKPFR 119 Query: 124 PHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWA 173 PHITL RDA+ I ++ V F L S F + Y ++ W Sbjct: 120 PHITLYRDATVQSDIS-HSVDFQLKVDHFCLMESQFNQKGVYYEVIEEWP 168 >UniRef50_B3EA65 2'-5' RNA ligase n=1 Tax=Geobacter lovleyi SZ RepID=B3EA65_GEOLS Length = 184 Score = 164 bits (415), Expect = 1e-39, Method: Composition-based stats. Identities = 58/177 (32%), Positives = 79/177 (44%), Gaps = 12/177 (6%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF AI+LP +++Q+ A R V + LHLTLAFLGEV+ + L+ Sbjct: 1 MRLFVAIELPEAVQQQLSLLHAELT---GVRWVRPEQLHLTLAFLGEVAEVQLGQLTEAL 57 Query: 65 GRIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 G+IR FTL G + RV W+G+ +P L QLA +R+ G R Sbjct: 58 GQIRCQPFTLQFGRLGCFPDQRHPRVFWIGL-EPNPALQQLAQQVRAAVRACGITLEERL 116 Query: 122 FHPHITLLRDASEAVTIPPPGFNWS-----YAVTEFTLYASSFARGRTRYTPLKRWA 173 F PHITL R AV F L SS + ++ L+R+A Sbjct: 117 FSPHITLARLKEADPRQVAALLTQQPVLPEVAVDAFLLVQSSLSARGAQHRVLRRFA 173 >UniRef50_C6P1X6 2'-5' RNA ligase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1X6_9PROT Length = 183 Score = 163 bits (414), Expect = 2e-39, Method: Composition-based stats. Identities = 49/170 (28%), Positives = 72/170 (42%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLFFA+ R + W+ GR + D LH TL F+G V+ + + L L A Sbjct: 10 LRLFFALWPNTVERTALAAWQPPLRESCGGRAMLPDTLHTTLVFVGNVAEHRLETLRLAA 69 Query: 65 GRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHP 124 + GF L L +A W + +V+ + P L L L + RP+ P Sbjct: 70 QEVSGRGFGLDLTEAHYWGHNHIVYAAPQTVPVQLADLVIDLEHSLRKHRFHFEQRPYKP 129 Query: 125 HITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 H+TLLR+A + P + + +F L S RY L R+ L Sbjct: 130 HVTLLRNAQWSEASLPAMRTVRWRIEDFVLVHSLSDEQGARYEVLARFPL 179 >UniRef50_D1C514 2'-5' RNA ligase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C514_SPHTD Length = 194 Score = 163 bits (413), Expect = 3e-39, Method: Composition-based stats. Identities = 51/190 (26%), Positives = 73/190 (38%), Gaps = 16/190 (8%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHF-PPEAGRPVAADNLHLTLAFLGEVSAEKEKA 59 M + RLF AI++P E+R+++ R + V + HLTL F G V + A Sbjct: 1 MQDVWRLFAAIEIPPEVRDRVAAVRDRLRDAGWRAKWVTPEGTHLTLKFYGNVPVDDIPA 60 Query: 60 LSLLA--GRIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSG 114 L FT+ AG + R RV+WLG+ R L L + +A G Sbjct: 61 LGAALRPAVATARPFTIEAAGAGAFPNPRRPRVLWLGVAGDVRRLGALQRSVEQASAAQG 120 Query: 115 CFQSNRPFHPHITLL----------RDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRT 164 R FHPH+T+ RD + V TL+ S R Sbjct: 121 YPPEERAFHPHLTVARVRPEDLGSLRDVERRLAEIAALPPLPIPVDRVTLFRSELRRTGA 180 Query: 165 RYTPLKRWAL 174 YT + + L Sbjct: 181 VYTVVDEFPL 190 >UniRef50_Q15YM1 2'-5' RNA ligase n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15YM1_PSEA6 Length = 176 Score = 163 bits (412), Expect = 3e-39, Method: Composition-based stats. Identities = 54/172 (31%), Positives = 80/172 (46%), Gaps = 2/172 (1%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 R FFA+ P + I WR FP + PV A N H+TLAFLG ++ + +LS Sbjct: 1 MRAFFALTPPGTTKLAIETWRDKAFP-QFYSPVKASNFHITLAFLGNINESQLDSLSQYI 59 Query: 65 GR-IRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 + F LTLD G W + + +WLG Q + + L +L+ + G R + Sbjct: 60 DAHLNTQCFLLTLDYVGYWSKPKALWLGNTQVSKEQLDLVALLQKASPACGITMQKRDYI 119 Query: 124 PHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALT 175 H+TL R SE N+++ TE TLY S+ + Y P+ W + Sbjct: 120 SHLTLARKCSENPPAALIEPNFAFQATELTLYESASSAHGVTYRPILTWPFS 171 >UniRef50_A8MDT9 2'-5' RNA ligase n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MDT9_CALMQ Length = 181 Score = 163 bits (412), Expect = 3e-39, Method: Composition-based stats. Identities = 46/174 (26%), Positives = 71/174 (40%), Gaps = 11/174 (6%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEA-GRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF A+DL E+R ++I +R A +PV +NLH+TL FLGEV + Sbjct: 3 RLFVAVDLSDEVRGKVIAFRDAVSSSGADVKPVEDENLHITLRFLGEVRDNLLPEIMRNL 62 Query: 65 GRIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 + F + + G + RV+W+G+ + L L + + R G R Sbjct: 63 NSLSFSSFRMHVKGTGAFPSASSPRVIWVGVEEGGDQLKALHDTVEELVGRYGVS-DERE 121 Query: 122 FHPHITLLRDASEAVTIPPP-----GFNWSYA-VTEFTLYASSFARGRTRYTPL 169 F PHIT+ R + F++ + V L S+ Y L Sbjct: 122 FTPHITVARVRGRGSVLGKLINQWRDFDFGWQTVDSVILKKSTLTPRGPIYENL 175 >UniRef50_Q2LPL4 2'-5' RNA ligase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LPL4_SYNAS Length = 195 Score = 162 bits (410), Expect = 5e-39, Method: Composition-based stats. Identities = 45/187 (24%), Positives = 70/187 (37%), Gaps = 15/187 (8%) Query: 3 EPQRLFFAIDLPAEIREQIIHWRATHFPPEAG--RPVAADNLHLTLAFLGEVSAEKEKAL 60 EP R F AI+ P +R+ + + +G V + +HLTL F G ++ + Sbjct: 5 EPIRAFLAIEPPEAVRQAMAAVQNRLKYCMSGAISWVRPEGIHLTLKFFGNIAETDVDRI 64 Query: 61 SLLAGRI--RQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGC 115 S G + R L + G + R RVVW+G+ L L + Q AR G Sbjct: 65 SAAVGPVASRFAPLDLQVRQVGLFPDFRRPRVVWMGLEGDISALKALQQEVDKQLARYGF 124 Query: 116 FQSNRPFHPHITLLRDAS--------EAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYT 167 + +R F H+TL R S + + TL+ S Y+ Sbjct: 125 HREDRDFRAHLTLARIKSSRGLSGLDRVMKKSDGYEAGRFRAAGLTLFRSDLTPQGAIYS 184 Query: 168 PLKRWAL 174 L + Sbjct: 185 KLAGYPF 191 >UniRef50_Q2VZ42 2'-5' RNA ligase n=2 Tax=Magnetospirillum RepID=Q2VZ42_MAGSA Length = 178 Score = 162 bits (410), Expect = 5e-39, Method: Composition-based stats. Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 14/180 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF I E+ +I + R + NLHLTL F+GEV + + + Sbjct: 2 IRLFVGIGFDEELTARIATLQRGL---PGARWIEPANLHLTLRFIGEVDEDLAEEIHRGL 58 Query: 65 GRIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 + +P F LTL G + ++ +WLG+ + L +LA + S A ++G R Sbjct: 59 DALVEPPFALTLAGLGLFGDRHQAHTLWLGVER-SDALSRLAARIESAAVQAGAEPETRR 117 Query: 122 FHPHITLLRDASEAV-------TIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 F+PH+TL R P AV FTL+ S+ R +Y L+ + L Sbjct: 118 FNPHVTLARLKHTPPGRIQDFIDATGPFREEHVAVERFTLFRSTLGRQGAQYDALEHYPL 177 >UniRef50_B8FSV2 2'-5' RNA ligase n=2 Tax=Desulfitobacterium hafniense RepID=B8FSV2_DESHD Length = 188 Score = 161 bits (409), Expect = 6e-39, Method: Composition-based stats. Identities = 48/184 (26%), Positives = 75/184 (40%), Gaps = 12/184 (6%) Query: 3 EPQRLFFAIDLPAEIREQIIHWRATHFP-PEAGRPVAADNLHLTLAFLGEVSAEKEKALS 61 + R F ID E++++I + GR DN HLTL FL ++S ++ + Sbjct: 4 QNIRAFLGIDFTEEVKDEIHELQQNLKGYALKGRWKGRDNFHLTLKFLAQISFAQKAQID 63 Query: 62 LLAGRI--RQPGFTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARSGCF 116 + ++ F L L G + RV+WLG+ + L L + G Sbjct: 64 ESLQSLCRKEKPFNLELKGLGVFGGKESCRVLWLGLAGDMQDLRSLHKKVDQVLTPLGFP 123 Query: 117 QSNRPFHPHITLLRDAS-----EAVTIPPPGFNW-SYAVTEFTLYASSFARGRTRYTPLK 170 RPF PHITL +D E + GF + V L+ S + + YT L Sbjct: 124 PERRPFSPHITLGQDIVFAGGFEEIQAKVGGFEFTPTHVERIHLFKSEQVQFKRIYTKLA 183 Query: 171 RWAL 174 ++L Sbjct: 184 DYSL 187 >UniRef50_C6J532 2'-5' RNA ligase n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J532_9BACL Length = 188 Score = 161 bits (409), Expect = 8e-39, Method: Composition-based stats. Identities = 47/185 (25%), Positives = 73/185 (39%), Gaps = 12/185 (6%) Query: 2 SEPQRLFFAIDLPAEIREQIIHWRATHFPP-EAGRPVAADNLHLTLAFLGEVSAEKEKAL 60 E RLF AI LP E++ ++ W + + + V A++ H+T+ FLG+ + + L Sbjct: 5 EEKWRLFIAIPLPQEVKYKLEEWCSEQKTRLDFKKWVHAEDYHITVQFLGDTAPGRLDEL 64 Query: 61 SLLAGRIRQP--GFTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARSGC 115 R + L G + R V+W G+R GL L + + S+ G Sbjct: 65 LASLSRAAKGMGPLELEAAGIGTFGRPASPSVLWAGVRGEVAGLESLHSRVTSENRALGF 124 Query: 116 FQSNRPFHPHITLLRDASEAVTIPPPGFNW-----SYAVTEFTLYASSFARGRTRYTPLK 170 R F PHITL R E + P S+ +Y + R Y + Sbjct: 125 VPEERRFSPHITLARKYREGARLDPAALQTQPEFGSWRADRLVIYRTHM-HKRPMYEVVG 183 Query: 171 RWALT 175 LT Sbjct: 184 SALLT 188 >UniRef50_A0KP01 2'-5' RNA ligase n=2 Tax=Aeromonas RepID=A0KP01_AERHH Length = 179 Score = 161 bits (408), Expect = 8e-39, Method: Composition-based stats. Identities = 57/168 (33%), Positives = 77/168 (45%), Gaps = 4/168 (2%) Query: 7 LFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAGR 66 LFFA+ + ++ WR P G+PV A NLHLTLAFLGE L R Sbjct: 8 LFFALP-AEALAPDLVAWRDQL--PWPGQPVPAANLHLTLAFLGEADPLTTTRLMAAVER 64 Query: 67 IRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPHI 126 P T+ L++ G + R++ W+G + P L LA LR + G + + PH+ Sbjct: 65 QHCPPLTIALNETGWFGRAKAAWVGPTEWPNELTVLARALRRHGEKLGLGNGEQGYRPHV 124 Query: 127 TLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 TL R ASE + P ++ F LY S RY PL W L Sbjct: 125 TLSRKASEPPALLPAP-DFVLQADRFCLYQSLSTPDGVRYEPLACWPL 171 >UniRef50_B5JNL9 2'-5' RNA ligase n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JNL9_9BACT Length = 183 Score = 161 bits (408), Expect = 9e-39, Method: Composition-based stats. Identities = 51/180 (28%), Positives = 78/180 (43%), Gaps = 14/180 (7%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 R F A+DLP E R ++ R++ + + +H+TL F+GE+ E+ + L Sbjct: 5 RYFIAVDLPEEHRRELTGLRSS---GKGFAWTRLERMHVTLRFIGELEGEQVERLVEGLA 61 Query: 66 RIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 + F L L+ AG + R RV+W+G+ L QL + + G R F Sbjct: 62 VVEVERFVLPLEGAGIFPARGRPRVLWVGVGSGHPRLFQLRQRIDDLLLKLGIEADVRSF 121 Query: 123 HPHITLLR--------DASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 HPH+T+ R A+E V + V F LYAS RY + +AL Sbjct: 122 HPHVTIARIRDGSSVNSATEWVKRRREFVGAPFRVEGFVLYASRLYSNGARYERVAEYAL 181 >UniRef50_Q3Z6J0 2'-5' RNA ligase family protein n=5 Tax=Dehalococcoides RepID=Q3Z6J0_DEHE1 Length = 193 Score = 161 bits (408), Expect = 9e-39, Method: Composition-based stats. Identities = 49/192 (25%), Positives = 80/192 (41%), Gaps = 18/192 (9%) Query: 1 MSEP-QRLFFAIDLPAEIREQIIHWRATH-FPPEAGRPVAADNLHLTLAFLGEVSAEKEK 58 M+E R F AI+LP E++ ++ R P +A + V +++HLT+ FLG+ + Sbjct: 1 MTEGLIRTFIAIELPPELKTRLAGLRDALPIPSQAVKWVNPESMHLTIKFLGDTPLSQIP 60 Query: 59 ALSLLAGRIRQ--PGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARS 113 + Q FTL+ G + +V+WLG+ L L + + Sbjct: 61 NIIKGLEEAAQVCHAFTLSTTRIGTFPSLSSPKVIWLGLHGEIEKLNTLFAEVEKNISGL 120 Query: 114 GCFQSNRPFHPHITLLR-----------DASEAVTIPPPGFNWSYAVTEFTLYASSFARG 162 G R F PH+TL R A+E++ PP S+ + L+ S Sbjct: 121 GFPAEKRDFAPHLTLGRLKEVAAKSDLQTAAESLKTAPPFPKTSFKASHICLFQSQLLAA 180 Query: 163 RTRYTPLKRWAL 174 YT L + +L Sbjct: 181 GPVYTRLAQISL 192 >UniRef50_A3QHP4 2'-5' RNA ligase n=1 Tax=Shewanella loihica PV-4 RepID=A3QHP4_SHELP Length = 176 Score = 161 bits (407), Expect = 1e-38, Method: Composition-based stats. Identities = 60/175 (34%), Positives = 83/175 (47%), Gaps = 8/175 (4%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 +RLF AI A EQ+ +A+ GR V DNLH+TLAFLG+ S +++ALS Sbjct: 2 KRLFLAIAPDAAQLEQLTQLQASL--DGEGRLVPRDNLHMTLAFLGQCSEAQQEALSESL 59 Query: 65 GRI----RQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 R+ R P F +TL+ W++ +++ L GLI L N + A + G S Sbjct: 60 ARLAHQRRLPTFEVTLNTLEHWVKPKILCLKGAARDPGLISLFNQCQRLAQQLGLHTSEH 119 Query: 121 PFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALT 175 F PHITL+R A + P + S LY S + Y L W LT Sbjct: 120 SFTPHITLMRKAKMLPELKAPSLSLSGHA--LHLYHSQSSEQGVLYKVLASWPLT 172 >UniRef50_O57823 UPF0097 protein PH0099 n=10 Tax=Euryarchaeota RepID=Y099_PYRHO Length = 184 Score = 161 bits (407), Expect = 1e-38, Method: Composition-based stats. Identities = 42/186 (22%), Positives = 80/186 (43%), Gaps = 16/186 (8%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEA-GRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 R F AID+ +R+ ++ + EA + V +NLH+TL FLGE++ E+ + + + Sbjct: 1 MRAFIAIDVNESVRDSLVRAQDYIGSKEAKIKFVERENLHITLKFLGEITEEQAEEIKNI 60 Query: 64 AGRIRQPGF--TLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQS 118 +I + + + G + RV+W G+ + + ++A + + A+ G + Sbjct: 61 LKKIAEKYKKHEVKVKGIGVFPNPNYIRVIWAGI-ENDEIIREMAREIEDELAKLGFKKE 119 Query: 119 NRPFHPHITLLRDA--SEAVTIPPPGFNW------SYAVTEFTLYASSFARGRTRYTPLK 170 F HITL R + + + S+ V L S+ Y L Sbjct: 120 G-NFVAHITLGRVKFVKDKLGLTMKLKELANEDFGSFVVDAIELKKSTLTPKGPIYETLA 178 Query: 171 RWALTQ 176 R+ L++ Sbjct: 179 RFELSE 184 >UniRef50_C0GSW7 2'-5' RNA ligase n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GSW7_9DELT Length = 189 Score = 161 bits (407), Expect = 1e-38, Method: Composition-based stats. Identities = 45/185 (24%), Positives = 68/185 (36%), Gaps = 13/185 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGR--PVAADNLHLTLAFLGEVSAEKEKALSL 62 R+FF I LP ++ + R R N H+TL FLGEV + + + Sbjct: 1 MRIFFGIPLPEVYQQMLGQARNEWKKRFRSRLSWTRPGNWHITLRFLGEVQDDLLPQVKV 60 Query: 63 LAGRIRQPGFTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 R+ F L +G + + RV WLG+ + L+ LA L + G Sbjct: 61 CLDRVEFEDFCLQGSKSGYFGSAGQYRVAWLGVDGEVQKLMNLARTLEKELEGFGFEPEK 120 Query: 120 RPFHPHITLLRDASEAVTIPPPGFNW--------SYAVTEFTLYASSFARGRTRYTPLKR 171 RPF H+TL R + P F+ + L+ S Y+ L Sbjct: 121 RPFKAHLTLARIKNFVADDPWKEFSDYVENMGWPEFNAERINLWQSRLTPAGPEYSVLAH 180 Query: 172 WALTQ 176 L + Sbjct: 181 KPLHR 185 >UniRef50_Q11D05 2'-5' RNA ligase n=26 Tax=Rhizobiales RepID=Q11D05_MESSB Length = 199 Score = 161 bits (407), Expect = 1e-38, Method: Composition-based stats. Identities = 46/180 (25%), Positives = 73/180 (40%), Gaps = 13/180 (7%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF A+++P R+ + R + +N HLTL F+G+V ++ Sbjct: 3 RLFTALEIP---RDAALSLSLLRGGLPGARWIDVENYHLTLRFIGDVEGHVADEIANALD 59 Query: 66 RIRQPGFTLTLDDAGQWL--RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 R+R+P F LTL G + + VW G+ P L L + R G R F Sbjct: 60 RVRRPSFLLTLSGVGAFGQKKPHSVWAGVAASPD-LQALQGEIERICQRLGLPAEQRKFT 118 Query: 124 PHITLLR-------DASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ 176 PH+TL R + + ++ + V F L +S + G Y + W L + Sbjct: 119 PHVTLARLKNASPHEVASYLSARGNFAAMPFRVNRFVLMSSRDSVGGGPYVVEEAWPLLR 178 >UniRef50_Q3AEX2 Putative 2'-5' RNA ligase n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AEX2_CARHZ Length = 177 Score = 161 bits (407), Expect = 1e-38, Method: Composition-based stats. Identities = 53/177 (29%), Positives = 81/177 (45%), Gaps = 7/177 (3%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLFFA+D P E++E+I F + VA +N HLTLAFLGE ++ + A Sbjct: 1 MRLFFAVDFPEELKEKIHQDITPLFKYNGVKWVAKENYHLTLAFLGEKEEKELLQIDRAA 60 Query: 65 GRIRQPGFTL-TLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 + Q +L + D G + R +V++L + GL+ LA LR + + Sbjct: 61 KSVPQVKESLIKVLDFGAFPNLKRPKVLFLKIE--SPGLLTLAENLRQNLKENNISFDEK 118 Query: 121 PFHPHITLLRDASEAVTIPPPGFN-WSYAVTEFTLYASSFARGRTRYTPLKRWALTQ 176 PF PH+T+ R E + P FN ++ F L S Y +K + + Q Sbjct: 119 PFVPHLTIGRVKGEIKNLALPKFNPKEFSFKNFYLIKSILTPEGPIYEKIKSYEILQ 175 >UniRef50_Q2Z065 Putative 2'-5' RNA ligase n=1 Tax=uncultured gamma proteobacterium RepID=Q2Z065_9GAMM Length = 179 Score = 160 bits (406), Expect = 2e-38, Method: Composition-based stats. Identities = 61/174 (35%), Positives = 78/174 (44%), Gaps = 5/174 (2%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 +R+FF ++ AE I WR G+PV A N H+TLAF+GE+ + LS A Sbjct: 2 KRVFFGLEPDAETCRGIADWRDRQT-SCDGQPVPAANFHITLAFVGELHDAALERLSRAA 60 Query: 65 GRIRQPGF----TLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 G LT++DAG W R + WLG P L QL+ L A G + R Sbjct: 61 DDWFAQGVAHGGNLTINDAGYWPRPGIFWLGPTHWPESLQQLSQKLGLLAGAVGGKRDRR 120 Query: 121 PFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 PF PHITL R A T P ++ TL+ S R Y L W L Sbjct: 121 PFQPHITLYRRCRTAPTAPLQLPTFTLRYRHCTLFESRQGRQGVSYQALLDWPL 174 >UniRef50_A1S9X0 Putative 2'-5' RNA ligase n=1 Tax=Shewanella amazonensis SB2B RepID=A1S9X0_SHEAM Length = 175 Score = 160 bits (406), Expect = 2e-38, Method: Composition-based stats. Identities = 55/174 (31%), Positives = 72/174 (41%), Gaps = 2/174 (1%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL 60 MS+ QRLF L + E I+ + P G+ V NLH+TLAFLG+ S + + L Sbjct: 1 MSDAQRLFLGFALSDQEGESILKLQKRLGAP--GKTVEKANLHMTLAFLGQTSQRQCQRL 58 Query: 61 SLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 I P F LD W + VV L + GL L + +S G QS Sbjct: 59 EAALEGITMPKFEQRLDSLVHWRGAGVVCLWGQATDSGLTDLYHGCQSLCQNLGLHQSEH 118 Query: 121 PFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 F+PHITL R A + LY S+ RY L+ W L Sbjct: 119 DFNPHITLFRKAKQFSIPEWQPEPVILRPERLNLYLSNSTPAGVRYEVLQSWPL 172 >UniRef50_C9R942 2'-5' RNA ligase n=1 Tax=Ammonifex degensii KC4 RepID=C9R942_AMMDK Length = 188 Score = 160 bits (405), Expect = 2e-38, Method: Composition-based stats. Identities = 54/189 (28%), Positives = 81/189 (42%), Gaps = 17/189 (8%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATH-FPPEAGRPVAADNLHLTLAFLGEVSAEKEKA 59 M E RLF+A+ LPA +R Q++ + F P + + V +NLHLT+ FLG+ A + Sbjct: 1 MQEKWRLFWAVPLPASLRRQLVEVQRELGFSPRSVKWVEEENLHLTVRFLGDTEAGQVDP 60 Query: 60 LSLLAGR--IRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSG 114 L F+L ++ G + RV+W+G++ P L L + G Sbjct: 61 LREAVAARLTSIKAFSLEVEKLGAFPSLKHPRVIWVGVKAHP-SLFLLYQAVEEAVRGLG 119 Query: 115 CFQSNRPFHPHITLLRDASEAVTIPPPGFNW--------SYAVTEFTLYASSFARGRTRY 166 + +PF PHITL R AV P W + V E LY S Y Sbjct: 120 FAPATQPFSPHITLGRVRERAVV--PGDHRWAERSYTFTPFLVDELVLYRSFLTPRGPIY 177 Query: 167 TPLKRWALT 175 + + L+ Sbjct: 178 SRVAAVRLS 186 >UniRef50_Q58963 UPF0097 protein MJ1568 n=11 Tax=Methanococcales RepID=Y1568_METJA Length = 173 Score = 160 bits (405), Expect = 2e-38, Method: Composition-based stats. Identities = 46/180 (25%), Positives = 75/180 (41%), Gaps = 19/180 (10%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF AID+P I+E+I ++ F + + V +NLH+T+ FLGEV EK K + L Sbjct: 1 MRLFLAIDIPENIKEEIAKFQEQ-FKMKGIKLVEKENLHITVKFLGEVDEEKLKEILNL- 58 Query: 65 GRIRQPGFTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 + + L G + S RV+W+G L+++ + + + G + R Sbjct: 59 -DLSIQPIKIKLKYIGTFPNSNYIRVIWIG--AYNNNLVEIFKEIDEKLSNLGFKKE-RE 114 Query: 122 FHPHITLLRD---------ASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRW 172 + PH+T+ R F + LY S+ Y +K W Sbjct: 115 YVPHLTIGRVKFIDNKKKLKDRIEKYKDVDFG-EFEAKHIKLYKSTLTPNGPIYEVIKEW 173 >UniRef50_A1U2M3 2'-5' RNA ligase n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1U2M3_MARAV Length = 178 Score = 159 bits (403), Expect = 4e-38, Method: Composition-based stats. Identities = 52/179 (29%), Positives = 82/179 (45%), Gaps = 13/179 (7%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLFF +++P I+ ++ + + R + LHLTLAFLGEV AE+ A Sbjct: 3 RLFFGLEIPESIKTSLLKVKTDI---KGARWQSKTQLHLTLAFLGEVEAEQVIQARDNAR 59 Query: 66 RIRQPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 ++ F L G + + +++W G+ P L L L + G N F Sbjct: 60 KVTHTPFKLEAAGLGCFGKEESPKILWAGVS-PEAELRGLQRTLAQRLINDGFTLQNPSF 118 Query: 123 HPHITLLRDASEAVTIPPPGFNW------SYAVTEFTLYASSFARGRTRYTPLKRWALT 175 PHITL R + A ++ ++ S+ V F L+ SS + + YT L+R+ LT Sbjct: 119 KPHITLSRFRAGAGSVAGLIEHYQRTRFGSWPVQGFALFESSPGQSGSVYTVLERYPLT 177 >UniRef50_A5V4K1 2'-5' RNA ligase n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V4K1_SPHWW Length = 177 Score = 159 bits (402), Expect = 4e-38, Method: Composition-based stats. Identities = 49/179 (27%), Positives = 72/179 (40%), Gaps = 13/179 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF A+ P +RE ++ A R LHLTL F+GEV + ++ Sbjct: 2 HRLFIALRPPLPMREALL---AAMGDIPGARWQDDAQLHLTLRFVGEVDRHVAEDIAAAL 58 Query: 65 GRIRQPGFTLTLDDAGQW-LRSRV--VWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 G + P F L LD G + R R+ +W G+ P + + L + + R+G R Sbjct: 59 GAVSHPAFALRLDGVGCFDRRGRIDNIWAGVT-PHQPVKSLHAAVTAALVRAGIAPEERA 117 Query: 122 FHPHITLLRDASEAVTIPPPGFNWSYAV------TEFTLYASSFARGRTRYTPLKRWAL 174 F PHITL R A + + F LY S Y+ + R+ L Sbjct: 118 FVPHITLARFARGQAPSGTLPMDSLWPAPVEGRFDHFLLYESHLGASGASYSAIARYRL 176 >UniRef50_A1RX48 2'-5' RNA ligase n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RX48_THEPD Length = 187 Score = 159 bits (402), Expect = 4e-38, Method: Composition-based stats. Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 12/186 (6%) Query: 1 MSEPQRLFFAIDLP-AEIREQIIHWRATHF-PPEAGRPVAADNLHLTLAFLGEVSAEKEK 58 M+ R F A+ + + +++ ++ + + V +NLH+TL FLGE+ + Sbjct: 1 MTNLIRSFVAVKVSSPSVLQRVEALQSDLRDAGLSAKFVEKENLHITLRFLGEIPPHTLE 60 Query: 59 ALSLLAGRIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGC 115 + ++ F + L G + R RV+W+G+ + R L +LA ++R+ Sbjct: 61 EVRNRLAKLSYHRFKIVLKGVGGFPSLDRPRVLWIGVDEGSRELSELAELVRTSLKGVKL 120 Query: 116 FQSNRPFHPHITLLR-------DASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTP 168 + + FHPH+T+ R A + VT F+LY S+ Y Sbjct: 121 PEPDEEFHPHLTIARLKGPLSAGARRIIAGSADTVFGEQEVTSFSLYKSTLTPRGPIYDE 180 Query: 169 LKRWAL 174 + R+ L Sbjct: 181 IARYDL 186 >UniRef50_A8ZY65 2'-5' RNA ligase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZY65_DESOH Length = 193 Score = 158 bits (401), Expect = 6e-38, Method: Composition-based stats. Identities = 47/186 (25%), Positives = 75/186 (40%), Gaps = 14/186 (7%) Query: 3 EPQRLFFAIDLPAEIREQIIHWRATHFPPE-AGRPVAADNLHLTLAFLGEVSAEKEK-AL 60 R F A DLPAE+ + + + T VA N+HLT+ FLGE+S E + AL Sbjct: 6 SKIRCFMAFDLPAEVIDDLAGIQKTVAAGGVKIGWVAPQNIHLTVKFLGEISPEAVQKAL 65 Query: 61 SLLAGRIRQ-PGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCF 116 + ++ + G + R RV+W G+ R L+ +L +G Sbjct: 66 AAAEQAVKGISPMQIRAQGIGVFPDMNRPRVLWAGLSGDLRSLVDFHGILDENLFSAGFG 125 Query: 117 QSNRPFHPHITLLR-----DASEAVTIPPPGFNW---SYAVTEFTLYASSFARGRTRYTP 168 + R F H+TL R D + P ++ + + +Y S Y+ Sbjct: 126 KEKRRFTAHVTLGRIKRAVDVRQLAAAMAPCLDFQSKPFCIDRLMVYKSDLTAAGPVYSR 185 Query: 169 LKRWAL 174 L +AL Sbjct: 186 LAAFAL 191 >UniRef50_B8I3E4 2'-5' RNA ligase n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I3E4_CLOCE Length = 181 Score = 158 bits (401), Expect = 6e-38, Method: Composition-based stats. Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 9/180 (5%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPE-AGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 R+FFAI+ +I+ + + +G +N HLTL F+GE + + + L + Sbjct: 1 MRVFFAIEFDDDIKTYLSEIQQKVRQHCTSGNFTLKENFHLTLRFIGEQNTDHVQNLKQV 60 Query: 64 A-GRIRQPGFTLTLDDAGQWLRS--RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 + GF L LD G + + ++WLG+ + + L QL N + ++ G + R Sbjct: 61 LKDAAQFQGFELILDKPGIFRKGNRGIIWLGIEKSLQ-LQQLYNNMEDLLSQKGYQKEER 119 Query: 121 PFHPHITLLRDASEA----VTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ 176 ++PHITL R+ +T + V +L S + Y PL+R LT Sbjct: 120 SYNPHITLAREVKTEDFGFLTEKIEIDKLTMKVKSISLMESKRINDKLAYIPLERAELTD 179 >UniRef50_B4S0B5 2,5 RNA ligase n=2 Tax=Alteromonas macleodii RepID=B4S0B5_ALTMD Length = 217 Score = 158 bits (399), Expect = 9e-38, Method: Composition-based stats. Identities = 48/202 (23%), Positives = 81/202 (40%), Gaps = 30/202 (14%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGR----------------------------- 35 R F +DL A + + WR P R Sbjct: 1 MRSFIGLDLSATEKLALDSWRQQALPEIMPRQWVKNESSRSRKSGNKRNNHNSGQGPSLP 60 Query: 36 -PVAADNLHLTLAFLGEVSAEKEKALSLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQ 94 V A N H+TL+FLGE++ + +AL ++ F+LTL+ G W ++++ Sbjct: 61 YAVPAANFHITLSFLGEINHRQHEALVYELDQLVSEPFSLTLNATGLWNGPKILFAAPTD 120 Query: 95 PPRGLIQLANMLRSQAARSGCFQSNRPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTL 154 P+ L +LA + R A ++ NR + PH+T++R A+ + +P + V+ F L Sbjct: 121 TPKALSELAKLSRKAARKAAIEVENREYKPHVTVVRKATSTLPLPLYSPSVDVHVSAFHL 180 Query: 155 YASSFARGRTRYTPLKRWALTQ 176 + S Y + W L Sbjct: 181 FESVTTPQGVTYPVRQSWPLKH 202 >UniRef50_B8FL01 2'-5' RNA ligase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FL01_DESAA Length = 192 Score = 158 bits (399), Expect = 1e-37, Method: Composition-based stats. Identities = 44/185 (23%), Positives = 67/185 (36%), Gaps = 14/185 (7%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFPPE-AGRPVAADNLHLTLAFLGEVSAEKEKA 59 M+ R F A+++P E+++ + + R V +HLTL FLG+V Sbjct: 1 MTRKLRTFIAVEIPEEVKQAVSRAQGGFKASGLPFRWVNPKGMHLTLKFLGDVLQSDIDG 60 Query: 60 LSLLAGRIR--QPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSG 114 + + T T G + ++RV+W G+ GL +LA+ L G Sbjct: 61 VVQVMKECTAGFAPMTFTAKGFGAFPNFSKARVLWTGLAGDAAGLAKLASCLEQGLEPLG 120 Query: 115 CFQSNRPFHPHITLLRDASE--------AVTIPPPGFNWSYAVTEFTLYASSFARGRTRY 166 N+ F HITL R AV + V L+ S Y Sbjct: 121 FEAENKRFSAHITLGRAKGRIDPKALLQAVEKAGSFETQKFTVDRIILFKSDLRPTGAVY 180 Query: 167 TPLKR 171 T L Sbjct: 181 TALAH 185 >UniRef50_B8D3G7 2'-5' RNA ligase n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D3G7_DESK1 Length = 192 Score = 157 bits (398), Expect = 1e-37, Method: Composition-based stats. Identities = 46/179 (25%), Positives = 71/179 (39%), Gaps = 15/179 (8%) Query: 2 SEPQRLFFAIDL-PAEIREQIIHWRATHFPPEAG-RPVAADNLHLTLAFLGEVSAEKEKA 59 E R F AI+L E+ ++I R +PV +N+HLTL F+GEV Sbjct: 6 GEIIRCFIAIELKNQEVLRRLIEIRDKITATGVDLKPVEDENIHLTLRFIGEVPRSVVDE 65 Query: 60 LSLLAGRIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCF 116 + I GF + + + G + R RV+W G+ + L++L ++ + R G Sbjct: 66 VCGFINTISYKGFKIHVKNIGGFPSLERPRVIWAGIEEGSDELLELYRIVEAGLRRIGIK 125 Query: 117 QSNRPFHPHITLLRDA---------SEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRY 166 F PHITL R + + F +S V E + S Y Sbjct: 126 PEREEFTPHITLARVKGYRGIEKLVKTLMELRGTDFGYS-PVEEVIVKKSVLTPRGPIY 183 >UniRef50_C8X1G4 2'-5' RNA ligase n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X1G4_DESRD Length = 194 Score = 157 bits (398), Expect = 1e-37, Method: Composition-based stats. Identities = 49/183 (26%), Positives = 74/183 (40%), Gaps = 12/183 (6%) Query: 4 PQRLFFAIDLPAEIREQIIHWRATHFPPEAGR--PVAADNLHLTLAFLGEVSAEKEKALS 61 QRLF + LP ++ + R P R N HLTLAFLG+ + + + + Sbjct: 2 SQRLFIGLPLPQTYQQGLEALRDEWAPKLRSRLSWTRPGNWHLTLAFLGDTRSAEAERVR 61 Query: 62 LLAGRIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQS 118 + TL G + + RV+W+G++ + LA+ + S A G Sbjct: 62 QALEAVHSAPITLQAAGGGAFPPGKKPRVLWVGLQHGRQESAALADQIWSVLAPLGIQPP 121 Query: 119 NRPFHPHITLLRDASEAVTIPPPGFNW-------SYAVTEFTLYASSFARGRTRYTPLKR 171 RPF H+TL R E F S + EF L+ S YT ++R Sbjct: 122 GRPFRAHLTLARVKQERGDSWEALFRSLGEKQWPSCQIAEFVLWQSELTPKGPVYTAVQR 181 Query: 172 WAL 174 +AL Sbjct: 182 YAL 184 >UniRef50_Q0Q0I5 LigT n=1 Tax=Heliophilum fasciatum RepID=Q0Q0I5_9FIRM Length = 206 Score = 157 bits (398), Expect = 1e-37, Method: Composition-based stats. Identities = 50/182 (27%), Positives = 76/182 (41%), Gaps = 12/182 (6%) Query: 5 QRLFFAIDLPAEIREQIIHWR-ATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 RLFFAI LP + + + + F + G DN H+T+AFLGE + L Sbjct: 1 MRLFFAITLPETVTKALTDLQWRVRFQLKRGNYTQPDNFHITVAFLGEQPDDVPDLLIPP 60 Query: 64 AGRIRQ--PGFTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQS 118 + + F+LTLD G++ R +W+G++ L L + G Sbjct: 61 LNALAKYTSPFSLTLDGMGRFGYGNPFRALWMGVQGERTRLNYLQETVSMICEVLGYPTE 120 Query: 119 NRPFHPHITLLRDA------SEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRW 172 R + PH+TL+R A E +T P ++ V F L S GR Y P+ + Sbjct: 121 ERHYRPHVTLVRHAVFPPNTEEVMTWTIPRNKATFKVNHFVLMESVTQHGRVVYRPVHTF 180 Query: 173 AL 174 Sbjct: 181 HF 182 >UniRef50_B1I1T7 2'-5' RNA ligase n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I1T7_DESAP Length = 195 Score = 157 bits (397), Expect = 2e-37, Method: Composition-based stats. Identities = 53/189 (28%), Positives = 82/189 (43%), Gaps = 16/189 (8%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFP-PEAGRPVAADNLHLTLAFLGEVSAEKEKA 59 MSE RLF+A++LP ++ ++ +A P + V +NLHLT+ FLGEV + + A Sbjct: 1 MSE-LRLFWAVNLPGGLKAELGRLQAELQNLPVDLKWVEQENLHLTVKFLGEVDSSRVSA 59 Query: 60 LSLLAGRIRQP--GFTLTLDDAGQWLR-SRVVWLGMRQPPRGLIQLANMLRSQAARSGCF 116 L+ F+L L G + R RV+W+G+ L +L + A G Sbjct: 60 LTRAVSGSVSGLVPFSLELTGWGTFGRPPRVLWIGVGGAVEKLQELWVRVDRALAPLGFP 119 Query: 117 QSNRPFHPHITLLRDAS---------EAVTIPPPGFNW-SYAVTEFTLYASSFARGRTRY 166 + F PH+TL R S A + +W + V L S+ R Y Sbjct: 120 AE-KSFSPHLTLGRLRSARNVAALRERAGALAADRGSWGGFTVDRVDLMQSTLTRQGPVY 178 Query: 167 TPLKRWALT 175 + AL+ Sbjct: 179 RVVSTAALS 187 >UniRef50_Q72W43 2'-5' RNA ligase n=2 Tax=Leptospira interrogans RepID=Q72W43_LEPIC Length = 182 Score = 157 bits (397), Expect = 2e-37, Method: Composition-based stats. Identities = 46/180 (25%), Positives = 77/180 (42%), Gaps = 14/180 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 R F I +P EI+EQ+ + R V +N H+TL FLGE S+E LS Sbjct: 1 MRTFLGISIPEEIKEQLTSIC---YGLSDIRWVPKENFHITLVFLGEQSSECLDILSDFC 57 Query: 65 GRIRQPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 I F L+L G + + +++ ++ P L QL L S + G + Sbjct: 58 SEISFTEFDLSLKSVGTFGKQKSPSILFAAVK-PSIELSQLHKTLDSGIRKLGFSIDRQN 116 Query: 122 FHPHITLLRDASEAVTIP-------PPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 + PH+T+ R + T + ++ V+EF +Y+S Y+ + ++L Sbjct: 117 YQPHLTIGRFKNSNETRVIMYLEEFANFVSSNFKVSEFHIYSSKTFSNGPVYSIEESFSL 176 >UniRef50_B1ZYS3 2'-5' RNA ligase n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZYS3_OPITP Length = 189 Score = 156 bits (396), Expect = 2e-37, Method: Composition-based stats. Identities = 50/182 (27%), Positives = 72/182 (39%), Gaps = 13/182 (7%) Query: 3 EPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSL 62 + QRLF A+ LP +R+ + P R + LHLTL FLG+ E+ L Sbjct: 2 DTQRLFIAVPLPPAVRDLVASL---TVPLREVRWTRDEQLHLTLRFLGDTPVEQIDPLCA 58 Query: 63 LAGRIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 I+ F L ++ G + RV+W+G+ L QL + G Sbjct: 59 RLAAIQVEPFLLPVERVGAFPPKASPRVIWVGVGSGHPRLHQLRQKIDDAVLACGLDADL 118 Query: 120 RPFHPHITLLRD-------ASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRW 172 R FHPHITL R + + S+ V F LYAS + +R+ Sbjct: 119 RTFHPHITLGRCQDGARNGVQQWLRHHADFAGPSFRVDAFELYASELHSAGAIHHLRQRF 178 Query: 173 AL 174 L Sbjct: 179 PL 180 >UniRef50_C7IIN7 2'-5' RNA ligase n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IIN7_9CLOT Length = 182 Score = 156 bits (396), Expect = 2e-37, Method: Composition-based stats. Identities = 44/179 (24%), Positives = 79/179 (44%), Gaps = 8/179 (4%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPE-AGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 R+FFAI+L I++ + + +G +N HLTL F+GE + ++ + L + Sbjct: 1 MRVFFAIELDDGIKDYLSEIQQEVKSHCISGNFTFKENFHLTLRFIGEQNVQQVEKLKQV 60 Query: 64 AGRIRQ-PGFTLTLDDAGQWLRSR--VVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 + P F L LD G + + ++W G+ + L +L N + + ++G + R Sbjct: 61 LKDVAYNPDFELRLDKLGSFKKGNRSIIWTGLEKSLH-LQELYNNMENTLFQTGYQKEER 119 Query: 121 PFHPHITLLRDASE---AVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ 176 ++PHITL R+ + V +L S + Y PL+R L + Sbjct: 120 SYNPHITLAREVKMENIGFIEKMEIEQLNVKVVSISLMESKRVNNKLAYVPLERAELQK 178 >UniRef50_A0LLA5 2'-5' RNA ligase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LLA5_SYNFM Length = 190 Score = 156 bits (395), Expect = 3e-37, Method: Composition-based stats. Identities = 50/185 (27%), Positives = 75/185 (40%), Gaps = 14/185 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEA-GRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 R F A+DLP+ ++ + + +A + D +HLTL FLG V+ E+ AL Sbjct: 2 IRTFIAVDLPSPVQAVLERFERELRKADATVAWIRPDRIHLTLKFLGNVAPERIPALREA 61 Query: 64 AGRIR--QPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQS 118 + F L G + + RV+W+G+R L L + + G Sbjct: 62 LESVSRTVSPFRLQAAGCGAFPTIRQMRVIWVGLRGDADRLGDLKQKIEAATVPLGFESE 121 Query: 119 NRPFHPHITLLRDA--------SEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLK 170 +RPF PH+TL R E + ++ V E LY S +YTPL Sbjct: 122 DRPFKPHLTLGRVKGRGRLSVLQEILMANQSFEAEAFDVAEVVLYKSDLKPDGAQYTPLF 181 Query: 171 RWALT 175 R T Sbjct: 182 RAPFT 186 >UniRef50_Q2BMM5 2',5' RNA ligase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMM5_9GAMM Length = 173 Score = 156 bits (395), Expect = 3e-37, Method: Composition-based stats. Identities = 45/174 (25%), Positives = 68/174 (39%), Gaps = 10/174 (5%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF AID+P I++Q+ E R ++ LH+TL F+GE + + Sbjct: 1 MRLFLAIDIPDAIQDQVSELVCPEL--EQVRWISCQQLHITLVFIGEQPQHRLDEIIEAT 58 Query: 65 GRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHP 124 F L L G + +S ++WLG+ + L +L L + G R F P Sbjct: 59 AETNFEPFPLKLSKIGHF-KSGIIWLGVEE-SEPLKRLQKSLSHKIRSLGIELEQRKFIP 116 Query: 125 HITLLRDAS------EAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRW 172 H+TL R V+ GF + V F L +S Y + Sbjct: 117 HLTLGRCKQLTPEILSKVSTQGLGFETGFNVEAFQLKSSILKANGAEYVTEGEF 170 >UniRef50_Q02P23 2'-5' RNA ligase n=7 Tax=Pseudomonas RepID=Q02P23_PSEAB Length = 182 Score = 156 bits (394), Expect = 4e-37, Method: Composition-based stats. Identities = 70/173 (40%), Positives = 90/173 (52%), Gaps = 4/173 (2%) Query: 3 EPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSL 62 RLFFA+ P + E+I WR P GR VA NLHLTLAFLG+V + + +AL Sbjct: 4 RSLRLFFALPCPPPLAERIGRWRDDQ--PLPGRQVATANLHLTLAFLGQVPSARLEALLD 61 Query: 63 LAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 +A I F L LD +W R+ ++ L QPP L++L LRS A RPF Sbjct: 62 MAAAIEAAPFDLCLDRLLRW-RNGILLLAPSQPPGALLRLRRALRSGLAELELPVETRPF 120 Query: 123 HPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALT 175 H+TL RDA+ IPPP + + V F+L+ S RY L RWAL Sbjct: 121 SAHLTLARDAAPLEDIPPPP-TFVWQVDHFSLFCSQNDAAGVRYRTLGRWALC 172 >UniRef50_C1DGI0 2-5 RNA ligase protein n=1 Tax=Azotobacter vinelandii DJ RepID=C1DGI0_AZOVD Length = 176 Score = 155 bits (393), Expect = 5e-37, Method: Composition-based stats. Identities = 62/172 (36%), Positives = 76/172 (44%), Gaps = 4/172 (2%) Query: 4 PQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 RLFF + LP E I WR GRPVA NLHLTLAFL E+ L L Sbjct: 5 NLRLFFGLPLPHRQAEAIDRWRREL--GLDGRPVARRNLHLTLAFLDSHPLERLAELQCL 62 Query: 64 AGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 IR F + LD R +V LG Q P L+QLA L+ +G R F Sbjct: 63 GEGIRGNAFEMKLDRLET-GRHGLVCLGTGQAPEALLQLAGELQRLLRGAGYALDERAFW 121 Query: 124 PHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALT 175 PH+TL RD +P ++ + F L+ S+ T Y PL W L Sbjct: 122 PHLTLARDCRNPP-LPASPPDFRWRAERFVLFHSTSDAQGTLYRPLFHWPLV 172 >UniRef50_B8CXC1 2'-5' RNA ligase n=1 Tax=Halothermothrix orenii H 168 RepID=B8CXC1_HALOH Length = 189 Score = 155 bits (393), Expect = 5e-37, Method: Composition-based stats. Identities = 44/188 (23%), Positives = 72/188 (38%), Gaps = 18/188 (9%) Query: 5 QRLFFAIDLPAEIREQIIH--WRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSL 62 RLF A+++P ++ I + + V DN H+TL F+GEV EK + Sbjct: 1 MRLFIAVNIPDRTKDLIERKLITIKRQVRQGIKWVKKDNWHITLKFIGEVGDEKVSEIKD 60 Query: 63 LAGRI--RQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQ 117 I R F++T++ G + R RV++L +++ L + +L G Sbjct: 61 SLESISERVKPFSITINGPGAFPDITRPRVMYLSIKEGSDNLTSVYKLLEKDLIDRGFKA 120 Query: 118 SNRPFHPHITLLRDASE-----------AVTIPPPGFNWSYAVTEFTLYASSFARGRTRY 166 +R F PH+TL R V F + + +L S R Y Sbjct: 121 DDREFTPHLTLARSRRRTDLNQLSKRLNKVVESLEDFKARVNINKLSLMKSELYRTGPVY 180 Query: 167 TPLKRWAL 174 + L Sbjct: 181 KEIFSVFL 188 >UniRef50_Q1GUY9 2',5' RNA ligase n=2 Tax=Sphingomonadales RepID=Q1GUY9_SPHAL Length = 204 Score = 155 bits (393), Expect = 5e-37, Method: Composition-based stats. Identities = 47/183 (25%), Positives = 71/183 (38%), Gaps = 13/183 (7%) Query: 3 EPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSL 62 RLF A+ P +R ++ R + + LHLTL F+GEV + ++ Sbjct: 2 STHRLFVALRPPPPVRALLLR---AMHGISGARWQSDEQLHLTLRFIGEVDHHLAEDIAA 58 Query: 63 LAGRIRQPGFTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 + G + P + + + R +VW + P L L + AR G Sbjct: 59 VLGALHAPAARVRIAGVDLFERQGRPHMVWARI-APEEPLAALHRKVEQCLARVGIAAET 117 Query: 120 RPFHPHITLLR-DASEAVTIPPPGFNW-----SYAVTEFTLYASSFARGRTRYTPLKRWA 173 R F PH+TL R + S P N + TLY S G +RY P+ R+ Sbjct: 118 RAFVPHVTLARLNRSSGPVAPFLALNGDLASDPFLFDHVTLYESEMGHGGSRYHPVARYP 177 Query: 174 LTQ 176 L Sbjct: 178 LVD 180 >UniRef50_A3DCR1 2'-5' RNA ligase n=3 Tax=Clostridium thermocellum RepID=A3DCR1_CLOTH Length = 183 Score = 155 bits (393), Expect = 5e-37, Method: Composition-based stats. Identities = 44/183 (24%), Positives = 76/183 (41%), Gaps = 12/183 (6%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPE-AGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 R F A+D E++++I+ + +GR +N HLTL FLGE+ K + + Sbjct: 1 MRTFVAVDFNTELKKEILKLQTQLRNLAVSGRWKYINNFHLTLKFLGEIEKSKVQDIKKG 60 Query: 64 AGRI--RQPGFTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQS 118 + + F L +D + + RV+WL + L L + + + G + Sbjct: 61 LDEVCGKTQKFCLNIDGLDFFPGNGCLRVLWLKLAGELESLHSLQSEIDIMLEKLGFEKE 120 Query: 119 NRPFHPHITLLRDA---SEAVTIPPPGFNWSY---AVTEFTLYASSFARGRTRYTPLKRW 172 R + PH+T+ +D + I N+ + V L+ S G+ YTPL Sbjct: 121 KRRYVPHVTIAQDVVFNKDFEEIKGLVGNYRFATIEVQSVNLFKSEQIGGKRVYTPLTEH 180 Query: 173 ALT 175 L Sbjct: 181 KLV 183 >UniRef50_A3K2S8 2',5' RNA ligase n=1 Tax=Sagittula stellata E-37 RepID=A3K2S8_9RHOB Length = 175 Score = 155 bits (392), Expect = 6e-37, Method: Composition-based stats. Identities = 55/177 (31%), Positives = 79/177 (44%), Gaps = 9/177 (5%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF A+ LP + R + + GRPV +NLHLTLAFLG+ E +AL Sbjct: 1 MRLFIALSLPPDARGPLTALQERL---PVGRPVPEENLHLTLAFLGDQPDEAVEALHDAL 57 Query: 65 GRIRQPGFTLTLDDAGQWLRSRVVWLGMR-QPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 +R P LTL A + +G+ + L ++ + +RS+ +G R F Sbjct: 58 STLRAPAVPLTLSGAALFGGKSGQAVGLEADGGKALTEMFDRVRSRLRSAGVRVERRRFR 117 Query: 124 PHITLLR-----DASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALT 175 PH+TL R DAS A+++ T F L+ S R Y L +AL Sbjct: 118 PHVTLARLKGGADASGALSVLAGASIGPVVATSFGLFRSHLNRDGAIYEALSVYALV 174 >UniRef50_A9WCY3 2'-5' RNA ligase n=3 Tax=Chloroflexus RepID=A9WCY3_CHLAA Length = 190 Score = 155 bits (392), Expect = 7e-37, Method: Composition-based stats. Identities = 49/180 (27%), Positives = 68/180 (37%), Gaps = 14/180 (7%) Query: 4 PQRLFFAIDLPAEIREQIIHWRATHFP-PEAGRPVAADNLHLTLAFLGEVSAEKEKALSL 62 RLF A++LP +R+++ + A R +HLTL FLGE + L Sbjct: 10 TLRLFIALELPQPVRDELKRIQQRLQGHSRAARWTDPTGMHLTLHFLGETPERLVEPLLT 69 Query: 63 LAGRIRQPGFTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 + P +LTLD G + + RVVW+G+R L L L + G Sbjct: 70 GLRSVSAPALSLTLDRLGCFPANGALRVVWVGLRGDLAALATLHRSLATVIQSLGLPTET 129 Query: 120 RPFHPHITLLRDASEAVTIPPPGFN----------WSYAVTEFTLYASSFARGRTRYTPL 169 RPF PHITL R A ++ L+ S YT L Sbjct: 130 RPFVPHITLARARPNATAADLRALRTALDTVAPQSLTWQSDSPRLFRSQLTPRGAVYTVL 189 >UniRef50_D0CTG2 2'-5' RNA ligase n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CTG2_9RHOB Length = 181 Score = 155 bits (392), Expect = 7e-37, Method: Composition-based stats. Identities = 48/173 (27%), Positives = 76/173 (43%), Gaps = 9/173 (5%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 R F I + EI + + GRPV +NLHLTL FL E + + L + Sbjct: 10 MRCFVGIPVSGEIADLCVEL---GRSASDGRPVPRENLHLTLQFLDEQPHDSLEELHMQL 66 Query: 65 GRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHP 124 +R P F++ + GQ+ ++ V M +P L L + + + RSG +R F P Sbjct: 67 DALRHPVFSIRVSGLGQFGQTLHV---MVEPSSILQSLHDKVLACVRRSGIRVPHRRFRP 123 Query: 125 HITLLR---DASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 HIT+ R + P + + V +F L++S+ RY L + L Sbjct: 124 HITVARGLKKCPSNDFLKQPITDCTMQVAQFALFSSTLHSSGARYETLADYQL 176 >UniRef50_B4D614 2'-5' RNA ligase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D614_9BACT Length = 179 Score = 154 bits (391), Expect = 9e-37, Method: Composition-based stats. Identities = 51/179 (28%), Positives = 80/179 (44%), Gaps = 12/179 (6%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 +RLF ++LP R +R + R + + LHLT++F+G+V AE E+ L Sbjct: 3 KRLFVGLELPEGSRHL---FRKLDPQIKGLRWLPPEQLHLTMSFIGDVDAEHEEQLRGNL 59 Query: 65 GRIRQPGFTLTLDDAGQWL--RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 ++R F L + G + R VVW G+ + L L ++ +G +PF Sbjct: 60 AQVRVSPFFLPITGVGAFGGERPSVVWAGVGKGHPHLFALHQHIQDAVLHAGLDPDLKPF 119 Query: 123 HPHITLLRDAS-EAVTIPPPGFNWS------YAVTEFTLYASSFARGRTRYTPLKRWAL 174 HPHITL R + P ++ + VT FTL++S + YT R L Sbjct: 120 HPHITLGRARGVSRAALKPFLRDYQESEFDLWKVTSFTLFSSRLTAEGSIYTVELRQEL 178 >UniRef50_Q2FTJ3 2',5' RNA ligase n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FTJ3_METHJ Length = 183 Score = 154 bits (390), Expect = 1e-36, Method: Composition-based stats. Identities = 53/180 (29%), Positives = 76/180 (42%), Gaps = 10/180 (5%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGR-PVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF AIDLP EIREQ + A V +++H+TL F+GEVS ++ + Sbjct: 3 RLFVAIDLPDEIREQFRDVQDGLRSSRARLTLVDQESMHITLKFIGEVSGSALSQITEIL 62 Query: 65 GRIRQPGFTLTLDDAGQWLR--SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 I F++ + G + RVVW + P + LA + S A G R F Sbjct: 63 QTIEASPFSMEVGLIGTNSQRAPRVVWAEVDDPGQC-RALAESIDSSLASLGFEPEKRKF 121 Query: 123 HPHITLLRDAS------EAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ 176 PHIT+ R EA+ + + V EF L S YT + +L + Sbjct: 122 RPHITIARVRQFHQSLFEALAGVASSCSGTIPVREFILKKSELTPDGPIYTDILHVSLRE 181 >UniRef50_C6MFU4 2'-5' RNA ligase n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MFU4_9PROT Length = 181 Score = 153 bits (388), Expect = 2e-36, Method: Composition-based stats. Identities = 46/171 (26%), Positives = 77/171 (45%), Gaps = 1/171 (0%) Query: 4 PQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 R+FFAI ++++Q+I+ G + +LH+TL FLG +S + + L + Sbjct: 11 SIRVFFAIFPNRQVQKQLIYHSEMLESIYGGHKIKMQHLHITLLFLGNISIHQIQTLQQI 70 Query: 64 AGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 A I F L LD G W + ++++ ++ P L L + L+ + +G NR + Sbjct: 71 AKMISAKKFELKLDIIGYWKHNHIIYIKAKEFPTELFSLTDSLKIALSENGFVFDNRAYK 130 Query: 124 PHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 PHIT+LR + + V ++ L S Y PL W L Sbjct: 131 PHITILRKTICHINTNMI-KPIQWCVNQWFLIQSQPTHYGVEYIPLNHWHL 180 >UniRef50_B9JCJ4 2'-5' RNA ligase n=44 Tax=Rhizobiales RepID=B9JCJ4_AGRRK Length = 213 Score = 153 bits (388), Expect = 2e-36, Method: Composition-based stats. Identities = 44/180 (24%), Positives = 70/180 (38%), Gaps = 13/180 (7%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF A+++P + R R + +N H+TL F+G+V + Sbjct: 18 RLFTALEIPRNAAMSLSLLRGGL---PGARWIDVENYHITLRFIGDVDGRTADEIVDRLD 74 Query: 66 RIRQPGFTLTLDDAGQWL--RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 RI +P F L L+ G + + VW G+ Q P + L + R G R F Sbjct: 75 RIDRPEFQLRLEGIGSFGSKKPHSVWAGVTQTPD-MYALQGEIERICQRIGLPPDPRKFT 133 Query: 124 PHITLLR-------DASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ 176 PH+TL R D ++ + V F L +S + G Y + + L + Sbjct: 134 PHVTLARLKSSRVDDVVHYLSGRGDFHTSPFTVGRFVLLSSRESVGGGPYLTEEVFPLHE 193 >UniRef50_Q0AKK0 2'-5' RNA ligase n=1 Tax=Maricaulis maris MCS10 RepID=Q0AKK0_MARMM Length = 179 Score = 153 bits (388), Expect = 2e-36, Method: Composition-based stats. Identities = 48/181 (26%), Positives = 71/181 (39%), Gaps = 14/181 (7%) Query: 4 PQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 RLF A+ +P + +I + R +N H+TL F G V + + L Sbjct: 2 TLRLFAALPVPDSLHAEIARLQK---GVPGARWRPRENFHITLRFFGTVDERQAEDLDAE 58 Query: 64 AGRIRQPGFTLTLDDAGQWLR--SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 I P F L L +G + + R +WLG+R P L +L A R +R Sbjct: 59 LAHIAMPPFDLALLGSGWFGKLDPRALWLGVR-PSEALSELNEKCERAARRCKLEPEHRN 117 Query: 122 FHPHITLLRDASEAVTIPPPGFN-------WSYAVTEFTLYASSFARGRT-RYTPLKRWA 173 FHPH+TL + + T FTLY+S +RG + Y + Sbjct: 118 FHPHMTLAYLQGTPIDRLTRFAERTGGFATEPWRATHFTLYSSWTSRGESNIYEAEADYP 177 Query: 174 L 174 L Sbjct: 178 L 178 >UniRef50_C5V3P4 2'-5' RNA ligase n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V3P4_9PROT Length = 174 Score = 153 bits (387), Expect = 2e-36, Method: Composition-based stats. Identities = 55/169 (32%), Positives = 73/169 (43%), Gaps = 4/169 (2%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 R+FFA+ R + W+ GR + D LH TL FLGEV A + +AL L A Sbjct: 9 RVFFALWPDRTERGGLSGWQPPLLACCGGRVMRTDTLHATLVFLGEVEAVQLEALKLAAA 68 Query: 66 RIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPH 125 + F L D+A W + +V+ R P LI+L L R R + PH Sbjct: 69 EVSVARFELCFDEAHYWGHNHIVYAAPRTLPPQLIELVRELEQNLLRHRFAFERREYKPH 128 Query: 126 ITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 ITLLR+A P + V EF L S + Y L R+ L Sbjct: 129 ITLLRNAHWTDKPLPGMSQVCWHVREFVLLES----AASSYRILARFCL 173 >UniRef50_A9B5P6 2'-5' RNA ligase n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B5P6_HERA2 Length = 195 Score = 153 bits (386), Expect = 3e-36, Method: Composition-based stats. Identities = 53/192 (27%), Positives = 76/192 (39%), Gaps = 16/192 (8%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFP-PEAGRPVAADNLHLTLAFLGEVSAEKEKA 59 MSE R F A+DLP I+ Q++ +A R +NLHLTL FLG ++ E Sbjct: 1 MSEQWRCFMALDLPEPIQAQLLAIQAELQQLGLPIRWSKPENLHLTLQFLGNLAVELLPD 60 Query: 60 LSLLAGR--IRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSG 114 L +Q TL + G + + +VVW G Q P L+QL + ++ G Sbjct: 61 LQTKLNHALTQQTAPTLNCNTWGYFPNASQPQVVWAGFEQWPNDLLQLQQAVVGCSSHIG 120 Query: 115 CFQSNRPFHPHITLLRDASEAVTIPPPGFNWSYAVTEF----------TLYASSFARGRT 164 RP+HPHITL + +++ L S + Sbjct: 121 IIAETRPWHPHITLGYSKERLTKHQIEQLSSQLQASQWPATPAIYPTCQLIRSISQPQAS 180 Query: 165 RYTPLKRWALTQ 176 Y L W L Q Sbjct: 181 SYQTLVTWQLNQ 192 >UniRef50_A4XVF3 2'-5' RNA ligase n=1 Tax=Pseudomonas mendocina ymp RepID=A4XVF3_PSEMY Length = 181 Score = 153 bits (386), Expect = 3e-36, Method: Composition-based stats. Identities = 62/173 (35%), Positives = 79/173 (45%), Gaps = 5/173 (2%) Query: 2 SEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALS 61 ++P R FFA+ P + I WRA AG+ VA NLHLTLAFLG A L Sbjct: 3 NDPLRPFFALPCPPHLAAAIGAWRADALG--AGKAVAVHNLHLTLAFLGSQPASCVAPLL 60 Query: 62 LLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 LA I+ TL LD G W R ++ L Q P+ L +L L ++ + R Sbjct: 61 ALATEIQGERCTLQLDRLGLW-RGGLLHLAPSQVPQALERLQQQLHARLLAASFVLEERA 119 Query: 122 FHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 F PH+TL R P P F+W F L+ S TRY L +W L Sbjct: 120 FRPHLTLARHYPNPPNCPAPTFDWPL--RHFALFCSENDGRGTRYRQLGQWPL 170 >UniRef50_Q1NWG3 2',5' RNA ligase n=4 Tax=Deltaproteobacteria RepID=Q1NWG3_9DELT Length = 181 Score = 153 bits (386), Expect = 3e-36, Method: Composition-based stats. Identities = 49/182 (26%), Positives = 76/182 (41%), Gaps = 15/182 (8%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF A+DLP + E + A F R + A+ LHLTL F+GEV K + G Sbjct: 3 RLFTAVDLPPAVAESLA---AMGFGLPGARWLPAEQLHLTLRFIGEVDGGIFKDIRAALG 59 Query: 66 RIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGC-FQSNRP 121 +R FT+ L G + +RV+W G+ +P + +L + R G R Sbjct: 60 DVRSAPFTIELRGFGCFPPRGPARVLWAGV-EPAAPVTELCKRVEKALVRPGLVAPEKRK 118 Query: 122 FHPHITLLRDASEAVTIPPPGF-------NWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 F PH+T+ R + ++ V +F LY+S +T + L Sbjct: 119 FAPHVTVARLDKVPSNRLGQFLAGNNLYTSETFTVAQFHLYSSELTPKGPYHTLEASYQL 178 Query: 175 TQ 176 + Sbjct: 179 DR 180 >UniRef50_D2MH67 2'-5' RNA ligase n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MH67_9BACT Length = 190 Score = 153 bits (386), Expect = 4e-36, Method: Composition-based stats. Identities = 45/187 (24%), Positives = 70/187 (37%), Gaps = 16/187 (8%) Query: 5 QRLFFAIDLPAEIREQIIH-WRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 R F AIDLP+ ++ I R +NLHL L FLG+ + + + L+ Sbjct: 3 LRTFLAIDLPSTLQSAIGENIRPVQRELPGLSWSKHENLHLNLKFLGDTAESQVDRIRLV 62 Query: 64 AGRI--RQPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQS 118 F + + G + RV+W+G+ L LA + G Q Sbjct: 63 VEPAISHVSPFVIACEGFGVFPNDRSPRVLWIGLGGDLDSLAALAECIDRAVVPLGFPQE 122 Query: 119 NRPFHPHITLLRDASEAVTI----------PPPGFNWSYAVTEFTLYASSFARGRTRYTP 168 +RPF PH+T+ R + + P S V +L+ S + YT Sbjct: 123 DRPFRPHLTVGRVKKDHREVGRVMSTLDVFTAPFPCGSLPVERVSLFKSDLRQTGPIYTK 182 Query: 169 LKRWALT 175 L +L Sbjct: 183 LWDISLN 189 >UniRef50_D1ZYF9 Whole genome shotgun sequence assembly, contig_3985 n=2 Tax=cellular organisms RepID=D1ZYF9_SORMA Length = 183 Score = 152 bits (385), Expect = 4e-36, Method: Composition-based stats. Identities = 46/179 (25%), Positives = 69/179 (38%), Gaps = 13/179 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF A+ P +RE + + E R + LHLTL ++GEV + ++++ Sbjct: 2 HRLFIALRPPVAMREALFDVQD---GVEGARWQDDEQLHLTLRYVGEVERPVAEDIAVVL 58 Query: 65 GRIRQPGFTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 +R P F L L GQ+ R R +W G+ P + L + R G R Sbjct: 59 QGVRAPAFDLALSGVGQFDAGRRGRALWAGVT-PHDAVAALHRKVDHALVRIGLPPEGRA 117 Query: 122 FHPHITLLRDASEA------VTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 F PHITL R + + + F LY S Y + R+ Sbjct: 118 FLPHITLARLNKSSGPTEMFLAAHAGLTSSPIRFDHFILYESHVGHAGAWYESVARYPF 176 >UniRef50_B9KQ60 2'-5' RNA ligase n=4 Tax=Rhodobacter sphaeroides RepID=B9KQ60_RHOSK Length = 193 Score = 152 bits (384), Expect = 6e-36, Method: Composition-based stats. Identities = 54/182 (29%), Positives = 72/182 (39%), Gaps = 16/182 (8%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 R F A+DLPAE+R + + P R + ++ HLTL FLGEV +A Sbjct: 2 IRAFVALDLPAEVRSALAVQQFLLPLP---RKIEPESFHLTLLFLGEVPEPVLEAAHEEF 58 Query: 65 GRIRQPGFTLTLDDAGQWL--RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 I +P F L + G + R R W G+R P L +L + A +G R F Sbjct: 59 ETIVRPPFGLEVAGLGLFGGERPRAAWAGLR-PSDPLARLQCRIERAARVAGIEPERRRF 117 Query: 123 HPHITLLRDASEAVTIP----------PPGFNWSYAVTEFTLYASSFARGRTRYTPLKRW 172 PH+TL R A + VT F LY S RY L + Sbjct: 118 VPHVTLGRFAPPPPEERFRLERAVAEGASFRGGGFEVTRFVLYRSHPGPKGARYEELATY 177 Query: 173 AL 174 L Sbjct: 178 PL 179 >UniRef50_B0K2A3 2'-5' RNA ligase n=9 Tax=Thermoanaerobacter RepID=B0K2A3_THEPX Length = 182 Score = 152 bits (384), Expect = 6e-36, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 70/182 (38%), Gaps = 13/182 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFP-PEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 R F IDL + ++ ++ GR DN H+TL FLGE+ E + Sbjct: 1 MRTFIGIDLDEKSIGKLSSFQEELKNYTIKGRWTHKDNFHITLKFLGEIETESVMKIKDS 60 Query: 64 AGRIRQ--PGFTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQS 118 + F + D G + + RV+W+G + L +L + + + + G + Sbjct: 61 LEVAVKDISPFYIKFDKVGFFKGNGDMRVLWVGTEENS-FLNKLHDNIDEELYKIGFEKD 119 Query: 119 NRPFHPHITLLRDASEAVTIPPPGFNWS------YAVTEFTLYASSFARGRTRYTPLKRW 172 R F HIT+ RD ++ I + V LY S R +Y P+ Sbjct: 120 KRKFTSHITIARDIRLSIDIEEVNSLFEKQEKGAILVDTVFLYESVIQENRRKYIPIFSV 179 Query: 173 AL 174 L Sbjct: 180 PL 181 >UniRef50_A9A3X7 2'-5' RNA ligase n=1 Tax=Nitrosopumilus maritimus SCM1 RepID=A9A3X7_NITMS Length = 180 Score = 152 bits (384), Expect = 6e-36, Method: Composition-based stats. Identities = 44/178 (24%), Positives = 79/178 (44%), Gaps = 14/178 (7%) Query: 5 QRLFFAIDLPA-EIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 R F AI++ +I++ I ++ +P+ +D LH TL FLGE+S E+ + + Sbjct: 1 MRTFVAIEISENDIKKSIKDFQNKL--QINAKPINSDQLHFTLQFLGEISEEQVQKVIES 58 Query: 64 AGRIRQPGFTLTLDDAGQWLR---SRVVWLGM-RQPPRGLIQLANMLRSQAARSGCFQSN 119 I+ FT+ L G + + RV+W+G + + LI+LA + + G S+ Sbjct: 59 LQTIKFSEFTINLKGIGAFPKPKFPRVIWIGTDEEGGKNLIELAKKVENVLKPLGL-VSD 117 Query: 120 RPFHPHITLLRDASEAVTIPPPGFNWSY------AVTEFTLYASSFARGRTRYTPLKR 171 +PF PHIT+ R + + + ++ L S Y+ L+ Sbjct: 118 KPFKPHITIFRIKKKIGDMTEELNKQKFMDFGMQKISRIMLKKSELTSDGPIYSNLEE 175 >UniRef50_C6QFN4 2'-5' RNA ligase n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QFN4_9RHIZ Length = 190 Score = 151 bits (383), Expect = 7e-36, Method: Composition-based stats. Identities = 47/177 (26%), Positives = 70/177 (39%), Gaps = 13/177 (7%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF AI++P EIR+++ R P R ++ +N H+TL F G++ K + Sbjct: 3 RLFTAIEIPDEIRDELHRLR---LPLPGARWISPENYHITLRFAGDIDNAKAREFIANLA 59 Query: 66 RIRQPGFTLTLDDAGQWLR--SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 I GF L + G + +W GM +P L LA A +G R F Sbjct: 60 SIDVDGFELRITGLGAFGGDDPHSIWAGM-EPNAKLDDLARAHEKAARNAGLAPETRAFR 118 Query: 124 PHITLLRDASEAVTIPPPGF-------NWSYAVTEFTLYASSFARGRTRYTPLKRWA 173 PH+TL R + + VT L +S + G Y R+ Sbjct: 119 PHVTLARLKHSNAEAVARFLSRYSGYRSEPFFVTRTLLMSSRPSVGGGPYGIEDRFP 175 >UniRef50_Q74MW1 NEQ502 n=1 Tax=Nanoarchaeum equitans RepID=Q74MW1_NANEQ Length = 172 Score = 151 bits (382), Expect = 8e-36, Method: Composition-based stats. Identities = 44/177 (24%), Positives = 65/177 (36%), Gaps = 19/177 (10%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 R+F AIDLP E++ QI + G+ V +NLH+TL F+GEV L Sbjct: 1 MRVFLAIDLPEELKNQIYSYYKKVSKAVYGKFVEKENLHITLKFIGEVLD--INPLIERL 58 Query: 65 GRIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 ++ F + + + RVVW+G L LAN + Sbjct: 59 NYVKFKPFEVKVKGLSAFPSIENPRVVWVGAHSV--YLNDLANQINRVLKSY------EN 110 Query: 122 FHPHITLLRDASEAVT------IPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRW 172 F HIT++R + + V F LY S+ Y L + Sbjct: 111 FVGHITIVRVKRVLDKKYLLELAKKFDLEYKFVVDRFYLYKSTLTPNGPIYEKLYEF 167 >UniRef50_A3CSA5 2'-5' RNA ligase n=1 Tax=Methanoculleus marisnigri JR1 RepID=A3CSA5_METMJ Length = 179 Score = 151 bits (382), Expect = 9e-36, Method: Composition-based stats. Identities = 50/176 (28%), Positives = 69/176 (39%), Gaps = 12/176 (6%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRP--VAADNLHLTLAFLGEVSAEKEKALSLL 63 R F AIDLP EIRE+ +GR V NLHLT+ FLGEV + + Sbjct: 3 RTFVAIDLPEEIRER-ARESQEILRRSSGRLAIVDPANLHLTVKFLGEVDPAQVDPVVEA 61 Query: 64 AGRIRQPGFTLTLDDAGQWL--RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 + F+LT+ A + RV+W + LA + + A G + RP Sbjct: 62 LRAVHADPFSLTVGYAVCNPPRKPRVIWCDVTDGGES-AVLARQVDALLAPLGFPRETRP 120 Query: 122 FHPHITLLRDASEAVTI------PPPGFNWSYAVTEFTLYASSFARGRTRYTPLKR 171 F PH+TL R + P + VT L S+ + Y L Sbjct: 121 FRPHVTLARVKEFHPSQCREAASTPREPLGTCRVTGIKLKKSTLTPRGSIYEDLAE 176 >UniRef50_D0MJ05 2'-5' RNA ligase n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MJ05_RHOM4 Length = 179 Score = 151 bits (382), Expect = 1e-35, Method: Composition-based stats. Identities = 51/180 (28%), Positives = 64/180 (35%), Gaps = 14/180 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF A+DLP + R ++ R P R D HLTL FLG V + L+ Sbjct: 2 LRLFVALDLPEDHRRRLYALRD---PSWKARWATPDQFHLTLRFLGPVEEDLLPELTRTL 58 Query: 65 GRIRQPGFTLTLDD---AGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 I P F L R RV+ + P L L + + G +RP Sbjct: 59 AEIEAPAFELAPRGLMVLPSLTRPRVLAAAVD-PVPELHALQAEIERRVVDLGFTPEDRP 117 Query: 122 FHPHITLLRDASEAVTIPPPGFN-------WSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 F PHITL R + V F LY S RY L R+ L Sbjct: 118 FRPHITLARLKQVPTAAVRSFLQRHRDFALTPFPVRAFHLYESHLHPDGARYEILHRFPL 177 >UniRef50_A7GTX3 2'-5' RNA ligase n=73 Tax=Bacillus cereus group RepID=A7GTX3_BACCN Length = 184 Score = 151 bits (381), Expect = 1e-35, Method: Composition-based stats. Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 11/178 (6%) Query: 8 FFAIDLPAEIREQIIHWRATHFPPEAGR-PVAADNLHLTLAFLGEVSAEKEKALSLLAGR 66 F AI LP +I+E++ +++ R V ++ H+TLAFLG + E+ + + Sbjct: 6 FIAITLPHDIKERLANYKEEMNDTLPFRSWVHKEDYHITLAFLGSATQEQLQEIKEGLHL 65 Query: 67 IR-QPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 ++ + F+L L + R R+ W G+ + + L+ L + S RSG RPF Sbjct: 66 LKNEQEFSLLLQGFSTFGPPERPRIFWAGLEE-SKALLHLQKKVHSICERSGFSLETRPF 124 Query: 123 HPHITLLRDASEAVTIPPPGF----NWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ 176 HPHIT+ R S+ V TLY S+ + +Y P+ L + Sbjct: 125 HPHITIARKWIGEAMFHIEDIKELKPVSFPVDTVTLYRSNM-KDTPKYHPVTEIKLQK 181 >UniRef50_Q0BX97 2'-5' RNA ligase n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BX97_HYPNA Length = 186 Score = 151 bits (381), Expect = 1e-35, Method: Composition-based stats. Identities = 49/180 (27%), Positives = 71/180 (39%), Gaps = 15/180 (8%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF A+ +P E+ + + +N H+TL F GE++ + + L L Sbjct: 3 RLFAALPIPPEVSAPLRKLQKDL---PGASWRPEENFHVTLCFYGELTGNQARDLDELLD 59 Query: 66 RIRQPGFTLTLDDAGQWLR--SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 I F L ++ G + R VW + + L LA+ A R G PF Sbjct: 60 EIEADAFDLRVEGMGWFGRREPNAVWARIGECD-ALRALASQCERAARRLGLPLEKHPFT 118 Query: 124 PHITLLR-------DASEAVTIPPPGFNWSYAVTEFTLYASSFARGR--TRYTPLKRWAL 174 PHITL A E V + + F LYAS RG +RY P+ + L Sbjct: 119 PHITLAYLHATPLEAAQEWVHTHQSHRSEPFRARLFHLYASRPRRGGGPSRYEPMADYPL 178 >UniRef50_D2LH53 2'-5' RNA ligase n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LH53_RHOVA Length = 202 Score = 150 bits (380), Expect = 1e-35, Method: Composition-based stats. Identities = 39/176 (22%), Positives = 71/176 (40%), Gaps = 13/176 (7%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF ++LP ++ + RA + A+N H+TL F+G+++ + + Sbjct: 3 RLFTGLELPHDVVGHLSGLRAGL---SGASWIDAENYHITLRFVGDITDAQANDFADALA 59 Query: 66 RIRQPGFTLTLDDAGQWL--RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 IR F + + G + + R +W G++ P L L A +G R F Sbjct: 60 DIRFESFDIAVSGLGSFGGHKPRSLWAGVKASP-ALETLQKAHERAARAAGLPPEPRNFT 118 Query: 124 PHITLLRDASEAVTIPPPGFN-------WSYAVTEFTLYASSFARGRTRYTPLKRW 172 PH+TL R + + + V+ F L++S +G Y + + Sbjct: 119 PHVTLARLRNVSPFAAADYLARHGGFACEPFTVSRFVLFSSRPNQGGGPYVVEEAY 174 >UniRef50_B6JCZ3 2'-5' RNA ligase n=13 Tax=Alphaproteobacteria RepID=B6JCZ3_OLICO Length = 192 Score = 150 bits (380), Expect = 2e-35, Method: Composition-based stats. Identities = 42/179 (23%), Positives = 77/179 (43%), Gaps = 13/179 (7%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF +++P +I + + R GR V +N H+TL F+G++ + + ++ Sbjct: 3 RLFTGLEIPPDISQSLSMLRGGL---PGGRWVDPENYHVTLRFIGDIDDDVAREIAGSLE 59 Query: 66 RIRQPGFTLTLDDAGQWL--RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 RI + F +TL + + R V + P R L++L R G R F Sbjct: 60 RIDRQPFEVTLQGLSSFGGKKPRAV-VACVAPTRPLMELQAEHERLMRRFGLEPEGRKFI 118 Query: 124 PHITLL-------RDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALT 175 PH+TL RD ++ +++ + + F L++S + G Y + L+ Sbjct: 119 PHVTLARLRDASSRDVADYLSVRGYFPAKRFVASRFVLFSSRASVGGGPYVVEDSYGLS 177 >UniRef50_B1L7J5 2'-5' RNA ligase n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L7J5_KORCO Length = 187 Score = 150 bits (380), Expect = 2e-35, Method: Composition-based stats. Identities = 45/176 (25%), Positives = 73/176 (41%), Gaps = 14/176 (7%) Query: 4 PQRLFFAIDL-PAEIREQIIHWRATHFPPEAG-RPVAADNLHLTLAFLGEVSAEKEKALS 61 P R F AID+ E+ +I+ + A +PV +NLHLTL FLGEV ++ + Sbjct: 2 PIRSFIAIDIEDPEVISKILSIQEEICSSSAKLKPVERENLHLTLKFLGEVEEDRLTQVM 61 Query: 62 LLAGRI--RQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCF 116 + I + F + L G + R VVW+G + +++A+ L ++ G Sbjct: 62 SIMDDILKKFSQFRMKLKGIGAFPTINRPNVVWIGAEEGREAFVRVASELDRALSKMGFQ 121 Query: 117 QSNRPFHPHITLLRDASEAVTIPPPGFNWS------YAVTEFTLYASSFARGRTRY 166 + + PH+T+ R +P S V E L S+ Y Sbjct: 122 RE-KGIEPHLTIARVKGPIGNLPEIIRKLSDIEIGYIDVREVKLKKSTLTPRGPIY 176 >UniRef50_Q1IWF3 2',5' RNA ligase n=2 Tax=Deinococcus RepID=Q1IWF3_DEIGD Length = 220 Score = 150 bits (380), Expect = 2e-35, Method: Composition-based stats. Identities = 51/178 (28%), Positives = 74/178 (41%), Gaps = 9/178 (5%) Query: 2 SEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALS 61 + RLF+A+ +P E+ + + RPV D LHLTLA+L V K L Sbjct: 29 NRTLRLFYALKVPQEVAAPLAEAQRQLRG--NWRPVRPDQLHLTLAYLPAVPPHKVNDLK 86 Query: 62 LLAGRIRQ--PGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGCF 116 L + Q L L G + RV W ++ GL +LAN LR+ G Sbjct: 87 RLGTALTQDLAPMLLRLRGTGYFPNEGSPRV-WF-VKAEAEGLSELANQLRAGIHALGLE 144 Query: 117 QSNRPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 + PF H+TL R A +PP F+ + V L S+ + Y + + L Sbjct: 145 TEDLPFKAHVTLARKKGPAPRVPPLTFDLGWQVGHVALIRSTLRKTGPIYDTVSTFRL 202 >UniRef50_Q47TD6 2',5' RNA ligase n=1 Tax=Thermobifida fusca YX RepID=Q47TD6_THEFY Length = 182 Score = 150 bits (379), Expect = 2e-35, Method: Composition-based stats. Identities = 54/182 (29%), Positives = 79/182 (43%), Gaps = 13/182 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAG-RPVAADNLHLTLAFLGEVSAEKEKALSLL 63 RLF A+ PA + + A+ P G R VA + H+TL FLG+V ++ ++ Sbjct: 1 MRLFTAVTPPAAALDALDAAVASARPTARGLRWVAREQWHMTLVFLGDVPDDQVDTVAGE 60 Query: 64 AGRI--RQPGFTLTLDDAGQWL----RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQ 117 GR+ R P +L+L +G + RSRV+W G+ L LA LR A G Sbjct: 61 LGRVAARHPAMSLSLRGSGTFPPQPVRSRVLWAGVDGDTAALTALATDLREAAVALGIPV 120 Query: 118 SNRPFHPHITLLR-DASEAVTIPPPGFNW----SYAVTEFTLYASSFARGRTRYTPLKRW 172 NR + PH+T+ R + +T P + E L S RY + W Sbjct: 121 ENRRYVPHVTVARARITTNLTAPCARLETLATEPWQAAEVHLVHSRLGAV-PRYQTIATW 179 Query: 173 AL 174 L Sbjct: 180 KL 181 >UniRef50_B9Z7M0 2'-5' RNA ligase n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z7M0_9NEIS Length = 168 Score = 150 bits (379), Expect = 2e-35, Method: Composition-based stats. Identities = 54/170 (31%), Positives = 76/170 (44%), Gaps = 3/170 (1%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLFFAI + G VAA+ LHLTLAFLGEV+ E+ L + Sbjct: 1 MRLFFAIIPDKSTSVSLHANGNLLAKHSRGHVVAAERLHLTLAFLGEVAPERLDELLAVG 60 Query: 65 GRIRQPGFTL-TLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 R+ + T+D G W + +VW G QP L +L L+ A++G RP+ Sbjct: 61 ERLPLLAGEVWTIDRVGGWP-NGIVWAGSSQPCLVLSELVAALQQGLAQAGFPTETRPYV 119 Query: 124 PHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWA 173 PH+TLLR A + P + + L S+ +Y L+RW Sbjct: 120 PHVTLLRRARHRLP-PQDISPLPFVLRRVLLMESTLTPQGPQYRELRRWP 168 >UniRef50_C3XAD7 2',5' RNA ligase n=1 Tax=Oxalobacter formigenes OXCC13 RepID=C3XAD7_OXAFO Length = 204 Score = 150 bits (379), Expect = 2e-35, Method: Composition-based stats. Identities = 45/170 (26%), Positives = 70/170 (41%), Gaps = 9/170 (5%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF+A+ +P ++ + H +G+ +NLH+TL FLG AL+ Sbjct: 21 LRLFYAL-IPDDVTNARLQECQIHV---SGKKTPPENLHMTLFFLGNQPKRNLPALNRFL 76 Query: 65 GRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHP 124 RI F + LD G + + + W+G Q P L ++ R + N F P Sbjct: 77 DRISFEPFEMKLDKIGYFPKIGLSWIGPEQTPAQLARMFEDTRQFLIPAYLKDKNENFRP 136 Query: 125 HITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGR---TRYTPLKR 171 HITL R +S+A S+ V+ L S + + Y L Sbjct: 137 HITLARRSSKAEIKMETPI--SWQVSRLVLMQSISSSEKGNHPEYRILHE 184 >UniRef50_C6BS46 2'-5' RNA ligase n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BS46_DESAD Length = 184 Score = 149 bits (378), Expect = 3e-35, Method: Composition-based stats. Identities = 43/181 (23%), Positives = 72/181 (39%), Gaps = 12/181 (6%) Query: 4 PQRLFFAIDLPAEIREQIIHWRATHFPPEAGR--PVAADNLHLTLAFLGEVSAEKEKALS 61 R F A +P E +E I + + V +N+H TL FLG + K + Sbjct: 3 KIRTFIAHPVPEEWKEIIGEAYGSLREGLESKIAWVKPENMHFTLKFLGPIEESKLAEVQ 62 Query: 62 LLAGRIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQS 118 + I F ++ AG + + V+W+G+ Q + A + S+ A+ ++ Sbjct: 63 EVLKNIPVVNFKISTAGAGFFPALEKPHVIWIGLEQGAKEFCSTAATIESEMAKLDFKEN 122 Query: 119 NRPFHPHITLLRD---ASEAVTIPPPGFNW----SYAVTEFTLYASSFARGRTRYTPLKR 171 + H H+TL R A + T+ N V FTLY S Y+ +K Sbjct: 123 RKSCHAHLTLGRVKKIAEDDWTVLAEKINSIKLPETEVNGFTLYKSVLTPDGPIYSVIKE 182 Query: 172 W 172 + Sbjct: 183 Y 183 >UniRef50_UPI000178815C 2''''-5'''' RNA ligase n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178815C Length = 185 Score = 149 bits (378), Expect = 3e-35, Method: Composition-based stats. Identities = 45/181 (24%), Positives = 73/181 (40%), Gaps = 12/181 (6%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFP-PEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF A+ LP+E+ +I W T + V + H+TL FLG+ + + L+ Sbjct: 3 RLFVAVRLPSEVSSRIQDWTETLRKHANFKKWVHPQDYHITLQFLGDTPSHRIAELTGAL 62 Query: 65 GRIRQP--GFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 + + F L+L DAG + R++W G+ L +L + S+ G Sbjct: 63 QEVAKERKPFKLSLYDAGVFGASGSPRILWAGVGGDLNALAELQQSVVSRMESFGFVPEE 122 Query: 120 RPFHPHITLLRDASEAVTIPP-----PGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 RPF PHIT+ R T + V E L+ ++ Y + L Sbjct: 123 RPFRPHITVGRKFQGNQTFSLDVIGKGPEPIQWDVLEMVLFRTNLQAS-PMYETVGVARL 181 Query: 175 T 175 + Sbjct: 182 S 182 >UniRef50_Q8TVM2 2'-5' RNA ligase n=1 Tax=Methanopyrus kandleri RepID=Q8TVM2_METKA Length = 188 Score = 149 bits (377), Expect = 3e-35, Method: Composition-based stats. Identities = 41/181 (22%), Positives = 72/181 (39%), Gaps = 15/181 (8%) Query: 6 RLFFAIDL-PAEIREQIIHWRATHFPPEAG-RPVAADNLHLTLAFLGEVSAEKEKALSLL 63 R F +ID+ E+ +I+ + A + V +N+HLTL FLG++ + + Sbjct: 5 RAFISIDIEDEEVVNRIVEVQERLKASGADLKLVEPENVHLTLKFLGDIPESRVTDVVNA 64 Query: 64 AGRIRQ--PGFTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQS 118 + + FT+ L G + RVVW+G+++ +A +L + R G + Sbjct: 65 MEKAAETVEPFTMRLKGIGVFPNPNYVRVVWIGVQEGSDETKAMAAVLEQELGRMGFRRE 124 Query: 119 NRPFHPHITLLRDAS--------EAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLK 170 + F PH+T+ R S EA+ V L S Y ++ Sbjct: 125 RKDFVPHVTVARVRSGRNKGRLIEAIRELSNVEVGEVEVDRIRLKKSILRPQGPEYHTVE 184 Query: 171 R 171 Sbjct: 185 E 185 >UniRef50_A4EPW8 2'-5' RNA ligase n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EPW8_9RHOB Length = 200 Score = 149 bits (377), Expect = 4e-35, Method: Composition-based stats. Identities = 47/186 (25%), Positives = 71/186 (38%), Gaps = 17/186 (9%) Query: 2 SEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALS 61 +EP R+F A+ LP +R+ + AGR V A+N H+TLAFLGE S + L Sbjct: 11 AEPVRVFLALPLPEALRDDLEDL---ALTLRAGRLVPAENYHVTLAFLGEQSEADLERLH 67 Query: 62 LLAGRIRQPGFTLTLDDAGQWLR--SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 + ++ F+L ++ RV+W + P L L +R + Sbjct: 68 VELQKLSSAPFSLQIEGLEAPGSKAPRVLWAKLASNPE-LTALHKAIRGRLRLCDMDLPR 126 Query: 120 RPFHPHITLLRDASEA-----------VTIPPPGFNWSYAVTEFTLYASSFARGRTRYTP 168 F PHITL R A + ++ + F LY S Y Sbjct: 127 ERFRPHITLARFARPLRRGDAMEIASFLQAEGGYRPNAFPYSGFALYQSRLTSDGALYEE 186 Query: 169 LKRWAL 174 L + Sbjct: 187 LAHYPF 192 >UniRef50_Q46QC5 2',5' RNA ligase n=4 Tax=Cupriavidus RepID=Q46QC5_RALEJ Length = 193 Score = 149 bits (376), Expect = 4e-35, Method: Composition-based stats. Identities = 47/179 (26%), Positives = 70/179 (39%), Gaps = 14/179 (7%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF A+D P EI +++ + R +HLTL FLGE AE+ + + Sbjct: 3 RLFIAVDAPPEIAARLVK---SVPTASGIRAAPTGQVHLTLRFLGECDAEQTERIRAALD 59 Query: 66 RIRQPGFTLTLDDAGQWLRSR--VVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 +R FTL + G++ + V+W GM P L L + + G R F Sbjct: 60 AVRAADFTLNVAGVGRFRGRQGSVLWAGM-APCPELDALYVAITAALQSVGIAPEPRRFR 118 Query: 124 PHITLLRDASEAVTIPPPGFNW--------SYAVTEFTLYASSFARGRTRYTPLKRWAL 174 PH+TL R A + + + F LY S R + + W L Sbjct: 119 PHLTLARCRPTAPEVLQREWLANHRDMAVPPWHARRFVLYESRLERQGATHAEIGSWPL 177 >UniRef50_Q1PYI6 Similar to 2'-5' RNA ligase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PYI6_9BACT Length = 187 Score = 149 bits (376), Expect = 4e-35, Method: Composition-based stats. Identities = 42/178 (23%), Positives = 68/178 (38%), Gaps = 14/178 (7%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEA-GRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF AI++ +RE+++H++ A + VA +NLH+TL F+G EK + + Sbjct: 4 RLFIAIEITDAVREKVLHFQNDLKKASADVKWVAPENLHITLKFIGNTDEEKICGIVDVI 63 Query: 65 GR--IRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 + I F + AG + RV++ G L + L G Sbjct: 64 HQSVIEIKPFDIRYSGAGTFPAGKYPRVIFAGAVDSSGALASIYERLNRHLTALGVPYDE 123 Query: 120 RPFHPHITLLRDAS--------EAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPL 169 F HIT+ R + E V ++ L S+ R YT + Sbjct: 124 HTFEAHITVGRVKTHKNIKKLMECVHSYKEFTFGQESIDHLVLMKSNLTREGPIYTRI 181 >UniRef50_C0N774 2'-5' RNA ligase n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N774_9GAMM Length = 170 Score = 149 bits (376), Expect = 5e-35, Method: Composition-based stats. Identities = 52/170 (30%), Positives = 75/170 (44%), Gaps = 3/170 (1%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 +RLFFA+ R+QI F P+ R + DNLH+TL FLG V A+ A Sbjct: 2 KRLFFALWPDNNSRQQIAQINQQIFFPD-IRKLIPDNLHITLVFLGNVDDAIATAVQQRA 60 Query: 65 GRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHP 124 G I P +L ++ W++ ++V L ++ P+ + QL N L + A RP+ Sbjct: 61 GDIIAPPISLEFNELDYWVKPKIVCLTCQRQPKAVYQLVNALTAMLAEYPVRVEQRPYRA 120 Query: 125 HITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 HITL R A + + F L S RY +RW L Sbjct: 121 HITLARKAKQRPEL--NFSPVVINADSFALVESISTEKGVRYQVRERWLL 168 >UniRef50_A9FR36 Putative uncharacterized protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FR36_SORC5 Length = 195 Score = 148 bits (375), Expect = 6e-35, Method: Composition-based stats. Identities = 50/185 (27%), Positives = 78/185 (42%), Gaps = 15/185 (8%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFP-PEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 R+F A+D AE+ ++ P + + V LH+TLAF+GE+ E+ + Sbjct: 1 MRVFVAVDPGAELLAKVGDLLREISPRAPSAKWVEPAGLHITLAFMGEIGEERLPLVIAA 60 Query: 64 AGRIRQ--PGFTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANMLRSQAA-RSGCFQ 117 AG + TL ++ G + R RV+WLG+ L + L + +G Sbjct: 61 AGSVAAFHRPLTLRIEKGGAFGTRRRPRVLWLGVGGAVGALTAIHRDLEQTLSMSTGYVP 120 Query: 118 SNRPFHPHITLLRD-------ASEAVTIPPPGFNW-SYAVTEFTLYASSFARGRTRYTPL 169 +RPF PH+TL R A +A ++ + E +Y S RYT L Sbjct: 121 EDRPFEPHLTLARSRDPRGDPALDACAQAVGSVDFGETRIEEIIVYQSELTPKGARYTAL 180 Query: 170 KRWAL 174 R L Sbjct: 181 ARVPL 185 >UniRef50_A7HSX7 2'-5' RNA ligase n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HSX7_PARL1 Length = 183 Score = 148 bits (375), Expect = 6e-35, Method: Composition-based stats. Identities = 39/178 (21%), Positives = 72/178 (40%), Gaps = 13/178 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF A+++P E E+++ + + R + + H+TL F+G+V + Sbjct: 2 IRLFTALEIPDEAAEKLMRLQQGL---DGARWIERPDFHITLRFMGDVPENVAADIDEAL 58 Query: 65 GRIRQPGFTLTLDDAGQWL--RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 I F + L+ G++ R +W G++ L L S R G R + Sbjct: 59 AEIPMEPFEVELEGVGEFGGKRPHTLWAGVKM-SEPLRVLQGRHESAMRRVGLKPETRNY 117 Query: 123 HPHITLLR-------DASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWA 173 PH+T+ R +A + + V +FTL+++ + G Y R+ Sbjct: 118 TPHVTIARLSHVSTDEAYRFIEANNLFAAPRFEVEQFTLFSAKASTGGGPYVVKTRYP 175 >UniRef50_A1SVM8 2'-5' RNA ligase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SVM8_PSYIN Length = 174 Score = 148 bits (375), Expect = 6e-35, Method: Composition-based stats. Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 5/174 (2%) Query: 4 PQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 +RLF I L + +Q+ +A A R V A NLH+TL FLG + + ++ L Sbjct: 2 TKRLFLGIALDKQQTQQLSKLQANF--DSAVRLVPAANLHMTLLFLGLIDDKTQQQLEEQ 59 Query: 64 AGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 + +P F L+LD W + +++ L + L++LA + + + ++ PF Sbjct: 60 ISLMDKPKFNLSLDKLDHWAKPKILCLTGQIDDPALLKLAKNCSALSTQFKLYKDENPFT 119 Query: 124 PHITLLRDASEAVTIPPPGFNWS---YAVTEFTLYASSFARGRTRYTPLKRWAL 174 PHITL R A + L+ S +Y L+ W L Sbjct: 120 PHITLARKAKYLPENMSTSVDIQPLLLTPKTLHLFHSQSTIEGVKYQILRSWNL 173 >UniRef50_Q88K67 2'-5' RNA ligase, putative n=6 Tax=Pseudomonas RepID=Q88K67_PSEPK Length = 181 Score = 148 bits (374), Expect = 7e-35, Method: Composition-based stats. Identities = 52/174 (29%), Positives = 73/174 (41%), Gaps = 7/174 (4%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 +RLFFA+ R + WR +G+PV A N H+TL FLG+V + A+ Sbjct: 13 KRLFFALPASDAQRRDLAQWR-RGLNLRSGKPVPAANFHVTLLFLGDVDTAQVPAICAAV 71 Query: 65 GRIRQPGF--TLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 ++ P L LD W R+ + L +Q P L+QL L+ G + R + Sbjct: 72 DQLALPAMAPRLLLDRLQVWQRAGALVLEAQQVPPALLQLVYGLQQALLPLGLEAATREY 131 Query: 123 HPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ 176 PH+TL RD + FTLY S Y PL +W L Sbjct: 132 RPHLTLSRDYRGQPPEASSAPEFYLTARHFTLYESRKGA----YWPLAQWPLAD 181 >UniRef50_A7GH44 2'-5' RNA ligase n=10 Tax=Clostridium RepID=A7GH44_CLOBL Length = 178 Score = 148 bits (374), Expect = 8e-35, Method: Composition-based stats. Identities = 45/177 (25%), Positives = 77/177 (43%), Gaps = 5/177 (2%) Query: 3 EPQRLFFAIDLPAEIREQIIHWRATHFPPE-AGRPVAADNLHLTLAFLGEVSAEKEKALS 61 R+F+A+ E +E++I ++ GR +N HLTL F+GEV +K L+ Sbjct: 2 RKTRVFYAVTFYEEAKEKLIEYKNIVVNNSVKGRFTNKNNFHLTLEFIGEVDEKKLSLLT 61 Query: 62 LLAGRIRQPGFTLTLDDAGQWLR--SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 + +++ P + G + R ++WLG+ + + LI L LR+ +G + Sbjct: 62 NILYKLQNPPKEVVTSYIGSFKRRDKEIIWLGIEE-NKCLITLQRELRNLLINNGFQIED 120 Query: 120 RPFHPHITLLRDASEAVTIPPPGFN-WSYAVTEFTLYASSFARGRTRYTPLKRWALT 175 R + PHIT+ R+ I F + L S + Y PL+ L Sbjct: 121 RRYKPHITIGREIVRKGFIEKNIFQPLHIPIASIALMESKRVNNQLVYEPLEEQILV 177 >UniRef50_Q12W73 2'-5' RNA ligase n=4 Tax=Methanosarcinaceae RepID=Q12W73_METBU Length = 183 Score = 148 bits (374), Expect = 8e-35, Method: Composition-based stats. Identities = 43/184 (23%), Positives = 67/184 (36%), Gaps = 17/184 (9%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF A+DLP+ IR ++I + F + V+ + +H+TL FLGEVS + ++ Sbjct: 3 RLFIAVDLPSSIRRELIDVL-SLFEGFKLKIVSPELIHITLKFLGEVSDDMVPDIASSLD 61 Query: 66 RIRQPGFTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 I F + G + RVVWLG +L + + ++ + R F Sbjct: 62 GIECMPFNANIKGVGVFSNLRSPRVVWLGAEGN---FKKLHEEVETSLSKLRFDKDKREF 118 Query: 123 HPHITLLRDASEAVTIPPPGFNW----------SYAVTEFTLYASSFARGRTRYTPLKRW 172 H TL R V + L S+ Y + Sbjct: 119 AAHATLARIKFMPKEQMKGLLYVLDKLKDVDLGEIRVDKVLLKKSTLTPDGPVYETIHEV 178 Query: 173 ALTQ 176 L Q Sbjct: 179 LLGQ 182 >UniRef50_A0B6Z0 2'-5' RNA ligase n=1 Tax=Methanosaeta thermophila PT RepID=A0B6Z0_METTP Length = 177 Score = 148 bits (373), Expect = 1e-34, Method: Composition-based stats. Identities = 41/178 (23%), Positives = 68/178 (38%), Gaps = 15/178 (8%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 R F A+DLP EI+ + + F + V + +H+TL FLGEV + + Sbjct: 1 MRCFVAVDLPEEIKRGVPAIQ-QAFAMNGLKLVDPNLVHITLKFLGEVEERRVDDIVNAL 59 Query: 65 GRIRQPGFTLTLDDAGQWLRS--RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 R+R F + G + RV+WLG P +LA + + G + + F Sbjct: 60 ARVRFSPFQARITGVGAFPGRSIRVIWLGATGPFE---ELARAVDTALEPFGFERDKK-F 115 Query: 123 HPHITLLRDASEAVTIPPPGF--------NWSYAVTEFTLYASSFARGRTRYTPLKRW 172 H TL R +++ ++ V F L S+ Y + + Sbjct: 116 SAHATLARVKDPSLSRILAERLSGVSEVDLGAFTVERFVLKKSTLTPRGPVYEDIAEF 173 >UniRef50_A8FGD3 2'-5' RNA ligase n=2 Tax=Bacillus pumilus RepID=A8FGD3_BACP2 Length = 183 Score = 148 bits (373), Expect = 1e-34, Method: Composition-based stats. Identities = 51/185 (27%), Positives = 80/185 (43%), Gaps = 11/185 (5%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL 60 MSE + F I +P ++ QI + A + H+TL FLG +S E+ K + Sbjct: 1 MSENRHYFIGIHIPEQLASQIKKDIDQRSGLSFQKWTAPHDYHVTLIFLGAISEERLKKI 60 Query: 61 SLLAGRI--RQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGC 115 L + F+L L++ GQ+ R RV + + L+ L ++ +G Sbjct: 61 IELLEVLSKEAAAFSLELNEVGQFGTKERPRVFFAKPDE-SEPLMLLREKVKEAVLSAGH 119 Query: 116 FQSNRPFHPHITLLRDA----SEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKR 171 RPFHPH+T+ R S A P + V+ TLY R RY +K+ Sbjct: 120 PVEKRPFHPHMTIARKWNADHSFAEQAPLRKEPYVIEVSSITLYE-IRPRETPRYYAIKQ 178 Query: 172 WALTQ 176 +AL + Sbjct: 179 FALHK 183 >UniRef50_B9L2B1 2'-5' RNA ligase n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L2B1_THERP Length = 191 Score = 147 bits (372), Expect = 1e-34, Method: Composition-based stats. Identities = 52/190 (27%), Positives = 76/190 (40%), Gaps = 16/190 (8%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRA-THFPPEAGRPVAADNLHLTLAFLGEVSAEKEKA 59 M E RLF AI +P ++R+++ A + V + HLT+ F G V+ + Sbjct: 1 MREEWRLFAAIPVPDDVRQRVAAAIAHLQARGYRAKWVDPEATHLTVKFFGSVATDSLPD 60 Query: 60 LSLLAGRIRQ--PGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSG 114 L+ + F L + AG + R RV+WLG+ L QL + A Sbjct: 61 LTRALRKSVTGLARFELQVHGAGAFPHPLRPRVLWLGIDGETAPLAQLVEQVERSAGSFA 120 Query: 115 CFQSNRPFHPHITLLRDASEA----------VTIPPPGFNWSYAVTEFTLYASSFARGRT 164 RPFHPH+TL R E + + V TLY S R Sbjct: 121 EKTDERPFHPHLTLARVRPEDLATLRALPQELERLARLPPLPFTVDRLTLYRSELFRSGP 180 Query: 165 RYTPLKRWAL 174 RYT ++ + L Sbjct: 181 RYTIIEEFLL 190 >UniRef50_Q5SHB1 2'-5' RNA ligase n=7 Tax=Thermaceae RepID=Q5SHB1_THET8 Length = 198 Score = 147 bits (372), Expect = 1e-34, Method: Composition-based stats. Identities = 54/181 (29%), Positives = 78/181 (43%), Gaps = 13/181 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF+A+ LP E+R ++ + P +PV LHLTL FLGE E+ L Sbjct: 1 MRLFYAVFLPEEVRAALVEAQTKVRPFRGWKPVPPHQLHLTLLFLGERPEEELPDYLALG 60 Query: 65 GRIR--QPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARS------ 113 R+ + F L G + RV W + G ++LA LR+ Sbjct: 61 HRLARLEAPFRARLRGTGYFPNEGTPRV-WFA-KAEAEGFLRLAEGLRAGVEELLGEEAV 118 Query: 114 GCFQSNRPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWA 173 ++PF PHITL R + A +PP F + V F L S YT L++++ Sbjct: 119 RIPGWDKPFKPHITLARRKAPAPRVPPVLFGLEWPVEGFALVRSELKPKGPVYTVLEKFS 178 Query: 174 L 174 L Sbjct: 179 L 179 >UniRef50_C8W3K6 2'-5' RNA ligase n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W3K6_DESAS Length = 189 Score = 147 bits (371), Expect = 2e-34, Method: Composition-based stats. Identities = 42/188 (22%), Positives = 73/188 (38%), Gaps = 16/188 (8%) Query: 3 EPQRLFFAIDLPAEIREQIIHWRATHFP-PEAGRPVAADNLHLTLAFLGEVSAEKEKA-L 60 +P RLF+A++L +E++ +I ++ + V +N HLT+ FLG+ E + Sbjct: 2 QPIRLFWAVNLSSELKAKIAVLQSQLKKCGADVKWVDEENFHLTVKFLGDTEPEIVPVMV 61 Query: 61 SLLAGRIRQPG-FTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGCF 116 + + G FTL ++ G + +V+W G+ L + + G Sbjct: 62 KKMKQEVGGLGVFTLRIEKLGVFPGKGLPKVIWAGVNGKKDKFRNLYDRTQRSLRTLGFA 121 Query: 117 QSNRPFHPHITLLRDASEAVTIPPPGFNWSY----------AVTEFTLYASSFARGRTRY 166 +P PH+TL R S T S+ + L S R Y Sbjct: 122 PDKKPLSPHLTLGRVRSARGTKELTAAMASFNSSNCFLGDEIIDSVDLMRSELTRNGAIY 181 Query: 167 TPLKRWAL 174 T ++ L Sbjct: 182 TIMESIVL 189 >UniRef50_B3T3P3 Putative 2',5' RNA ligase family protein n=2 Tax=environmental samples RepID=B3T3P3_9ARCH Length = 179 Score = 146 bits (370), Expect = 2e-34, Method: Composition-based stats. Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 13/175 (7%) Query: 5 QRLFFAIDLPA-EIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 R F AI++ ++ I + +PV N+H T+ FLGEVS E +S Sbjct: 1 MRTFVAIEVSDKDVLNSIHKIQTEL--NIKAKPVELHNMHFTVQFLGEVSEEMIGKISDT 58 Query: 64 AGRIRQPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 I F++T G + + RV+W+G+ L +LA M+RS+ + + Sbjct: 59 LNSIEFSAFSITFASIGVFPKPNSPRVIWIGVTNGINELEKLAEMIRSKLSDIDFSPDKK 118 Query: 121 PFHPHITLLRDASEAVTIPPPGFNWS------YAVTEFTLYASSFARGRTRYTPL 169 F PH+T+ R ++ +P +S ++E L S YT L Sbjct: 119 -FKPHVTIFRVKNKIEDLPSKLEKFSSCSFGKQLISEIKLKKSELTYQGPIYTDL 172 >UniRef50_B8CTB7 2'-5' RNA ligase, putative n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CTB7_SHEPW Length = 186 Score = 146 bits (370), Expect = 2e-34, Method: Composition-based stats. Identities = 52/171 (30%), Positives = 76/171 (44%), Gaps = 3/171 (1%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 +R+F L E +QI ++ PE R V + NLH+TLAF G S E AL Sbjct: 19 KRVFLGFALTTEQTKQIEAIQSQL--PENVRLVPSQNLHMTLAFFGYASNETIDALINNI 76 Query: 65 GRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHP 124 + +P FT+ LD W + +++ L L+ +AN ++ A + QS ++P Sbjct: 77 DAMSKPHFTVHLDCIAHWKKPKILCLKGTASDPNLLSIANDSQTIAQKLKLHQSEYHYNP 136 Query: 125 HITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALT 175 HITL R A EAV + L+ S + Y L W LT Sbjct: 137 HITLSRKAKEAVDG-ICYTALTLQPNALHLFESFAGKDGVEYPILHSWHLT 186 >UniRef50_B9ZLA9 2'-5' RNA ligase n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZLA9_9GAMM Length = 173 Score = 146 bits (370), Expect = 3e-34, Method: Composition-based stats. Identities = 55/171 (32%), Positives = 74/171 (43%), Gaps = 3/171 (1%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL 60 MS +R+F A+ RE + P GRP+ +LHLTLAF G + A + + Sbjct: 1 MSNRRRVFIALWPDEATREMLDEEAKRLGGP--GRPIPKAHLHLTLAFAGTIPATQVDCI 58 Query: 61 SLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 + G + Q F LTLD G + R+RV W+G + P L LA R A G + Sbjct: 59 AREIGMLEQEAFPLTLDRLGHFERARVSWIGPSETPAALDTLAARARDLARACGVTPEDH 118 Query: 121 PFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKR 171 PF PH+TL R A + P + E L S Y L R Sbjct: 119 PFLPHVTLRRFARPPESDRPEH-PIHWNAAEVALIESGQDGNPGLYQVLAR 168 >UniRef50_C1F3J7 2'-5' RNA ligase n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F3J7_ACIC5 Length = 185 Score = 146 bits (369), Expect = 3e-34, Method: Composition-based stats. Identities = 48/183 (26%), Positives = 74/183 (40%), Gaps = 14/183 (7%) Query: 5 QRLFFAIDLPA-EIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 +RLF I +PA E+ E + A R + H+TL F G V+ +E L Sbjct: 2 KRLFTGIAIPAAEVPELLECSEALAAQHGQLRWSERNGWHVTLQFYGMVTTAQEACLRQA 61 Query: 64 AGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 ++R +L + G + R+ V+ + QP L L + + G RP+H Sbjct: 62 LAQVRGSLSSLQIRGIGFFERAGVLLAEV-QPNADLDALQRAVVKVSRACGFLPEERPYH 120 Query: 124 PHITLLRDASEAVTIP------------PPGFNWSYAVTEFTLYASSFARGRTRYTPLKR 171 PH+TL R S + S V+EF LY S +RY ++R Sbjct: 121 PHVTLARRRSRRDQAEWQEILSRTLPHFQEHPSGSVKVSEFVLYESVPGPAGSRYEVMER 180 Query: 172 WAL 174 + L Sbjct: 181 FLL 183 >UniRef50_B0TTJ1 2'-5' RNA ligase n=2 Tax=Shewanella RepID=B0TTJ1_SHEHH Length = 177 Score = 146 bits (369), Expect = 3e-34, Method: Composition-based stats. Identities = 49/176 (27%), Positives = 76/176 (43%), Gaps = 9/176 (5%) Query: 2 SEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALS 61 S+ +R+F L + + II + P + R V + NLH+TLAFLG + + A+ Sbjct: 7 SQTKRVFLGFSLDSLQTQSIIAIQGQL--PNSVRLVPSANLHMTLAFLGAATPAQINAII 64 Query: 62 LLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 ++ +P F++ LD W + +++ L GL Q A + AA G S Sbjct: 65 DSVDKMSRPKFSVMLDSLSHWEKPKILCLRGDATDPGLRQFAQDAQCIAAELGLHCSEYH 124 Query: 122 FHPHITLLRDAS---EAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 ++PHITL R V PP A ++ L+ S Y L W L Sbjct: 125 YNPHITLARKTKAEVRGVDYPPLIL----APSQLQLFESYSGLNGVEYPTLHCWQL 176 >UniRef50_Q1ARL5 2',5' RNA ligase n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ARL5_RUBXD Length = 180 Score = 146 bits (369), Expect = 3e-34, Method: Composition-based stats. Identities = 45/180 (25%), Positives = 73/180 (40%), Gaps = 9/180 (5%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 R F AI P E+RE + A P R V +N+HLTL FLGE+S E+ ++ Sbjct: 1 MRAFVAILPPPEVREALSRA-ARSLPVIGVRWVRPENIHLTLKFLGEISEEQAPQIASAL 59 Query: 65 GRIRQ--PGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 ++ + F + + G + R+RV+W G+ + L +LA + G + Sbjct: 60 AQVARLRRPFRIEPEGLGAFPSPERARVLWAGVGEGSASLEELAAAVEEALFPLGFGREQ 119 Query: 120 RPFHPHITLLRDASEAVTIPPPGFN---WSYAVTEFTLYASSFARGRTRYTPLKRWALTQ 176 RPF H+TL R + + + L S+ Y L ++ Sbjct: 120 RPFRAHLTLGRARGRPARLEAGRLDPGIPGFTAGSLHLMRSAQGPSGVYYESLAEHPFSE 179 >UniRef50_Q2S292 2'-5' RNA ligase n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S292_SALRD Length = 179 Score = 146 bits (369), Expect = 3e-34, Method: Composition-based stats. Identities = 43/181 (23%), Positives = 63/181 (34%), Gaps = 13/181 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF AIDLP R ++ +A R H+TL F+G+ S E+ Sbjct: 1 MRLFTAIDLPDGFRNEVADLQAP--SALDTRWTDPAQFHVTLRFIGDASPERAARYEQAL 58 Query: 65 GRIRQPG---FTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 + P LD RV+ LG+ + L+ L + R G +R Sbjct: 59 ADLTAPAARCEPYGLDVLPSRRSPRVLVLGLER-TESLLALHTAVGDALEREGLSPDDRD 117 Query: 122 FHPHITLLRDASEAVTIPPPGFNW-------SYAVTEFTLYASSFARGRTRYTPLKRWAL 174 + PH+TL R A ++ F LY S+ Y P + L Sbjct: 118 YTPHVTLARVGDTAPETVHAFLRTADVPSFPAFQADRFVLYESTLTSDGAVYDPRAIYPL 177 Query: 175 T 175 Sbjct: 178 N 178 >UniRef50_A3VLU9 2'-5' RNA ligase n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VLU9_9RHOB Length = 181 Score = 146 bits (369), Expect = 3e-34, Method: Composition-based stats. Identities = 54/183 (29%), Positives = 71/183 (38%), Gaps = 15/183 (8%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 R F A+DLP IR + +A GR V DNLHLTLAFLGE+ +K + L+ Sbjct: 1 MRAFVALDLPEAIRRPLTRLQAGL---SVGRLVDEDNLHLTLAFLGEIDPQKAQDLAARL 57 Query: 65 GRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPP-RGLIQLANMLRSQAARSGCFQSNRPFH 123 + LTL + L M P + L+ L + +R A +G R F Sbjct: 58 ADLPDAPIELTLTGIDIMGGKKPNLLVMDAAPTQALVTLQDRVRRIAMDAGIEMERRRFR 117 Query: 124 PHITLLRDASEAVTIPPPGFNW-----------SYAVTEFTLYASSFARGRTRYTPLKRW 172 P +TL R T G + TLY S Y PL + Sbjct: 118 PQVTLARFGKVMTTKDERGLAAFLSLNAPYSLPTELADTVTLYRSHLTGDSADYEPLAEF 177 Query: 173 ALT 175 LT Sbjct: 178 LLT 180 >UniRef50_B8GHT8 2'-5' RNA ligase n=1 Tax=Methanosphaerula palustris E1-9c RepID=B8GHT8_METPE Length = 179 Score = 146 bits (369), Expect = 3e-34, Method: Composition-based stats. Identities = 47/173 (27%), Positives = 69/173 (39%), Gaps = 10/173 (5%) Query: 6 RLFFAIDLPAEIREQIIHWR-ATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 R F IDLPA IRE+I + A P V +H+TL F+GEV+ E+ +S Sbjct: 3 RAFIGIDLPASIREEIAAVQPALRAVPADISLVNPAIIHITLRFIGEVTEEEIGRISAAL 62 Query: 65 GRIRQPGFTLTLD--DAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 I+ F +++ R RV+W G+ R L + + + G R F Sbjct: 63 QTIKVKPFPVSIRPVTLNSRTRPRVIWCGVEDQGRS-AALHQAIEAVLSPLGYEPEARAF 121 Query: 123 HPHITLLRDASEAVTIPPPGFNW------SYAVTEFTLYASSFARGRTRYTPL 169 PH T+ R ++ + + V EF L S YT L Sbjct: 122 TPHATVGRIRRGHSSLEGVIDSLGQNGFGDFEVGEFKLKQSVLTAKGPIYTDL 174 >UniRef50_A8UTL9 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UTL9_9AQUI Length = 187 Score = 146 bits (368), Expect = 4e-34, Method: Composition-based stats. Identities = 40/180 (22%), Positives = 75/180 (41%), Gaps = 12/180 (6%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 R F I E + + G+ V N+H+T FLG++S + ++ Sbjct: 1 MRAFVGFFTTKGIYEHVEKLKEETKSYLKGKWVEPQNMHMTFQFLGDISQSQAVSVLKNL 60 Query: 65 GRI--RQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 I + F + G + R R++W+G+ + L +LAN + ++G Sbjct: 61 QSIAEKHAPFKVQYRSLGVFPDRRRPRILWVGVSRGENRLKRLANEVAQLNKKAGIRVDA 120 Query: 120 RPFHPHITLLR----DASEAVTIPPPGFNWSY---AVTEFTLYASSFARGRTRYTPLKRW 172 +PFHPH+T+ R D + ++ N+++ V L +SS YT ++ + Sbjct: 121 KPFHPHVTVCRIKEADRKKLGSLMNRYRNFNFGEETVDRIALISSSLTSIGPIYTVVEEF 180 >UniRef50_Q0ABC1 2'-5' RNA ligase n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0ABC1_ALHEH Length = 182 Score = 146 bits (368), Expect = 4e-34, Method: Composition-based stats. Identities = 58/178 (32%), Positives = 76/178 (42%), Gaps = 9/178 (5%) Query: 2 SEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALS 61 + R+FFA+ +R+ + + GRPV +LHLTLAF G V+AE+ L Sbjct: 8 TTRHRVFFALWPDEALRDGLARLARSL---RGGRPVPRGHLHLTLAFAGLVTAEQVACLQ 64 Query: 62 LLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQP--PRGLIQLANMLRSQAARSGCFQSN 119 A +R P FTL L G + R+RV + + P L +LA L G Sbjct: 65 RAAAGVRAPAFTLRLQTLGGFARARVAHVAPDEQDLPPALPELAGQLNRALVACGVPAER 124 Query: 120 RPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYAS-SFARGRTRYTPLKRWALTQ 176 R F PH+TL RDA WS V F L S R Y L W L + Sbjct: 125 RGFRPHVTLRRDARPPRPRSVSLPEWS--VDRFVLVESGDRGRPGP-YRVLAEWLLQR 179 >UniRef50_Q2RN52 2',5' RNA ligase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RN52_RHORT Length = 199 Score = 145 bits (367), Expect = 5e-34, Method: Composition-based stats. Identities = 45/179 (25%), Positives = 67/179 (37%), Gaps = 14/179 (7%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF A+ L +R ++ A R A NLH+TL FLGE + + Sbjct: 3 RLFIALTLDDSLRARLSGLEA---GIPGARWAPAQNLHVTLRFLGETEEGLAREIDAALL 59 Query: 66 RIRQPGFTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 +R FTL + G + R R++W G+ + P L L + + G + Sbjct: 60 SVRAEPFTLPIAGLGVFGGERRPRLLWAGVEKTP-ALTLLKGRIDAALRGLGVGPDEHVY 118 Query: 123 HPHITLLRDA-------SEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 PHI+L R V S VT F+L++S Y + L Sbjct: 119 SPHISLARLKTPDPERLRRFVEANNLSVRGSLTVTSFSLFSSLLTGEGPLYREEAVYPL 177 >UniRef50_A8F8W1 2'-5' RNA ligase n=1 Tax=Thermotoga lettingae TMO RepID=A8F8W1_THELT Length = 187 Score = 145 bits (366), Expect = 6e-34, Method: Composition-based stats. Identities = 41/178 (23%), Positives = 72/178 (40%), Gaps = 13/178 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFP-PEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 R F A+D+ +R V+ +N+HLTL FLGEV + K ++ Sbjct: 1 MRTFIAVDVNENVRGVSQQIVEKLMKRGFKANWVSKENIHLTLFFLGEVQSHKVDEIARH 60 Query: 64 AGR--IRQPGFTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQS 118 + P F+ ++ G + + RV+WLG++ + L +L ++S+ + Sbjct: 61 LCHRIMGFPSFSYIVEKLGYFSKQSKPRVIWLGIK-SNQALQKLYEEMKSELVKHNFSFE 119 Query: 119 NRPFHPHITLLRDASEAVTIPPPGFNWSYA-----VTEFTLYASSFARGRTRYTPLKR 171 R F PHIT+ R P + ++ V F++Y S Y + Sbjct: 120 ER-FSPHITVGRIKDFPGAWQPLIEDITFEPITVAVDRFSIYFSRLTPAGPIYKKVYE 176 >UniRef50_Q2CG27 2'-5' RNA ligase (Fragment) n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CG27_9RHOB Length = 204 Score = 145 bits (366), Expect = 7e-34, Method: Composition-based stats. Identities = 57/183 (31%), Positives = 76/183 (41%), Gaps = 16/183 (8%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGE-VSAEKEKALSLL 63 R F A+DLPAE + H + +GRPVA +NLH+TLAFLGE V+ + +A Sbjct: 1 MRAFVALDLPAEAVAILGHLQERM---PSGRPVAPENLHMTLAFLGENVAEDVLEAAHDQ 57 Query: 64 AGRIRQPGFTLTLDDAGQWL-RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 IR P + + G R+ V + + L L + S A R+G R F Sbjct: 58 FAAIRLPAPEIEVTGLGTLGARTPAVLVAEARRTAPLEALQGAVASAARRAGLVLERRRF 117 Query: 123 HPHITLLRDASEAVTIPPPGFNW-----------SYAVTEFTLYASSFARGRTRYTPLKR 171 PHITL R S A + F LYAS+ Y L R Sbjct: 118 RPHITLARFRSTADAAALERLRLFLQSEGRFRLDPFIARSFALYASTLTHEGPVYEELAR 177 Query: 172 WAL 174 + L Sbjct: 178 YPL 180 >UniRef50_C3X1K9 2'-5' RNA ligase n=1 Tax=Oxalobacter formigenes HOxBLS RepID=C3X1K9_OXAFO Length = 193 Score = 145 bits (366), Expect = 7e-34, Method: Composition-based stats. Identities = 43/173 (24%), Positives = 67/173 (38%), Gaps = 9/173 (5%) Query: 2 SEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALS 61 + +RLF A+ +E++ + AGR +N HLTL FLG L Sbjct: 15 EKTRRLFVALLPDRHTKEKLASVQKKI----AGRKTPPENFHLTLFFLGNQPESILFPLK 70 Query: 62 LLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 R+ F L+LD G + + R+ W+G + P GL+QL N R + Sbjct: 71 NFMDRVTFDPFVLSLDKTGYFSKIRLSWIGPTEIPPGLVQLHNTTRQFLVPAYLEDKRES 130 Query: 122 FHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGR---TRYTPLKR 171 F PH+TL R + + V L S ++ +Y + Sbjct: 131 FRPHVTLARKSLPPSVK--ITSPVVWTVDRLALMESILSKEPGRHPQYRIMHE 181 >UniRef50_C4XNB5 2'-5' RNA ligase n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XNB5_DESMR Length = 187 Score = 144 bits (365), Expect = 8e-34, Method: Composition-based stats. Identities = 54/181 (29%), Positives = 70/181 (38%), Gaps = 13/181 (7%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAG--RPVAADNLHLTLAFLGEVSAEKEKALSLL 63 RLF I LP + A P G DN HLTL FLGE A + ++ Sbjct: 3 RLFVGIGLPPAHQAVAAGLVARLRPLACGPATWTRPDNAHLTLKFLGETDAARLPDITAA 62 Query: 64 AGRIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 GR+ F L + G + R RVVW G+ + LA + + AR G R Sbjct: 63 LGRVAFAPFPLAVAGGGFFPSPSRPRVVWAGLAEGADSCRTLAAAVDAALARIGFAVEAR 122 Query: 121 PFHPHITLLR--------DASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRW 172 PF H+TL R D + + V TLY S+ RY L R+ Sbjct: 123 PFAAHLTLGRLRDASRGCDVRGMLAVLGETVWPPATVEALTLYESTLGPQGPRYVALARF 182 Query: 173 A 173 A Sbjct: 183 A 183 >UniRef50_B2A6J9 2'-5' RNA ligase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A6J9_NATTJ Length = 186 Score = 144 bits (365), Expect = 9e-34, Method: Composition-based stats. Identities = 50/181 (27%), Positives = 72/181 (39%), Gaps = 13/181 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRAT-HFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 R F AI +++ E + + G+ V DN+HLT+ FLG+V L LL Sbjct: 1 MRSFIAIFFNSKVVESLARNQNLCREKGIKGKYVKPDNIHLTVKFLGDVEQNALDKLQLL 60 Query: 64 AGRIRQ-PGFTLTLDDAGQWL---RSRVVWLGMRQPP-RGLIQLANMLRSQAAR-SGCFQ 117 + Q L L G + R RV+W G+ + L Q+ + R Q Sbjct: 61 DQELEQIEPLKLRLSHLGVFPGKGRPRVLWQGLSGDDIKDLQQIHQEVEQFTERELKIAQ 120 Query: 118 SNRPFHPHITLLR--DASEAVTIPPPGFNW----SYAVTEFTLYASSFARGRTRYTPLKR 171 + F PH+TLLR D + V+I V +L S YT LKR Sbjct: 121 EKKKFRPHVTLLRNPDIPKGVSIDQISKEELERPEILVDSISLIKSELTPKGPIYTELKR 180 Query: 172 W 172 + Sbjct: 181 F 181 >UniRef50_B0T6B2 2'-5' RNA ligase n=5 Tax=Caulobacteraceae RepID=B0T6B2_CAUSK Length = 178 Score = 144 bits (365), Expect = 9e-34, Method: Composition-based stats. Identities = 44/180 (24%), Positives = 68/180 (37%), Gaps = 14/180 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF A+ +PAE+ + ++ E R + H+TL F+G+V + L Sbjct: 2 IRLFTAVAIPAEVGDHLL---LRQHGIEGARWRPREAFHITLKFIGDVQETQAVDLDEEL 58 Query: 65 GRIRQPGFTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 + P F L L G + VW G+ + P L +LA A R+G R Sbjct: 59 QGVEAPAFDLELQGVGHFGEGIEIHAVWAGLAESPD-LRRLAKANEGAARRAGLKPETRL 117 Query: 122 FHPHITLLRDASEAVTIPPPGFNW-------SYAVTEFTLYASSFARGRTRYTPLKRWAL 174 + PH+TL AV + + F LY+S + Y + L Sbjct: 118 YTPHVTLAYLKRPAVPEVAAWIQANNLLHSPPFRIDRFGLYSSWRTSEGSAYRLEAEYPL 177 >UniRef50_A4YHN8 2'-5' RNA ligase n=1 Tax=Metallosphaera sedula DSM 5348 RepID=A4YHN8_METS5 Length = 180 Score = 144 bits (365), Expect = 1e-33, Method: Composition-based stats. Identities = 42/180 (23%), Positives = 65/180 (36%), Gaps = 16/180 (8%) Query: 5 QRLFFAIDLPAE--IREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSL 62 RLF I + +RE + T + V N+H+TLAFLGEV+ ++ + Sbjct: 1 MRLFIGIPVYDAPWLREALGMVERT---GADVKLVEPQNVHITLAFLGEVAEDRVNLVRE 57 Query: 63 LAGRIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 ++ F + G + R RVVW+G+ + L ++ L Sbjct: 58 SLDEVKFTAFRVVFRGLGAFPSVSRPRVVWMGITEGFNELKRIRTSLVKALNSRRVRVEE 117 Query: 120 RPFHPHITLLRDASEAVTIPPPGFNWSY--------AVTEFTLYASSFARGRTRYTPLKR 171 F PH+TL R + V E L+ S+ Y PL R Sbjct: 118 EQFVPHLTLGRVKGPRGVLELAKLVEEMSDKQFGEQEVKEIVLFKSTLTPKGPIYDPLHR 177 >UniRef50_Q28V17 2'5' RNA ligase n=1 Tax=Jannaschia sp. CCS1 RepID=Q28V17_JANSC Length = 178 Score = 144 bits (365), Expect = 1e-33, Method: Composition-based stats. Identities = 47/180 (26%), Positives = 70/180 (38%), Gaps = 13/180 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 R F A+ L + + ++T G+PV +NLHLTLA+LGEVS + + L + Sbjct: 1 MRAFVALPLTDPAIDALTRVQSTL---PTGKPVPEENLHLTLAYLGEVSEDVLETLHDML 57 Query: 65 GRIRQPGFTLTLDDAGQWLR-SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 R P + + G + R + G P L L + A ++G R F Sbjct: 58 SAARLPSADIAFEGLGTFAEMERGLTFGAVAPSDALTALQTKVAQLARQAGVLLPRRRFR 117 Query: 124 PHITLLRDASEAV----TIPPPGFNWSYAVTEFT-----LYASSFARGRTRYTPLKRWAL 174 PH+TL R + V FT LY S+ R+ L + L Sbjct: 118 PHVTLTRANRQPKGPTRDRLASAIGTPIKVPGFTARTANLYESTLTPSGARHEVLASYPL 177 >UniRef50_A1RS17 2'-5' RNA ligase n=5 Tax=Thermoproteaceae RepID=A1RS17_PYRIL Length = 187 Score = 144 bits (364), Expect = 1e-33, Method: Composition-based stats. Identities = 45/177 (25%), Positives = 74/177 (41%), Gaps = 13/177 (7%) Query: 6 RLFFAIDL-PAEIREQIIHWRATHFP-PEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 R F AID+ EI +++ + + V +NLHLTL FLGE+ + + Sbjct: 5 RAFVAIDVENPEIVKKVEEIQREVLRLGLDIKLVEKENLHLTLRFLGEIPQSRVNDIVKS 64 Query: 64 AGRIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 IR F + L G + + RV+W+G+ + L+ LAN++R+ + + +R Sbjct: 65 LTTIRFSKFKIALSGLGVFPDLAKPRVLWIGVSKGLENLVNLANIVRNLVDKYAEHREDR 124 Query: 121 PFHPHITLLRDAS--------EAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPL 169 F PH+T+ R S E + V + L S Y+ L Sbjct: 125 EFSPHLTIGRIKSGRNIDKLREVIERYREAEFGVIEVDKVKLKKSVLTPRGPIYSDL 181 >UniRef50_A4TU26 2',5' RNA ligase n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TU26_9PROT Length = 177 Score = 144 bits (364), Expect = 1e-33, Method: Composition-based stats. Identities = 52/182 (28%), Positives = 69/182 (37%), Gaps = 16/182 (8%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF + A + A R +AA NLH+TL F+GEV + L Sbjct: 2 IRLFVGL---ALPADLAARLAALAGGIPGARWLAARNLHVTLRFIGEVDEGVAEDLHQRL 58 Query: 65 GRIRQPGFTLTLDDAGQW--LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 I P F + LD G + + R +W G+ P L L + + A G +R F Sbjct: 59 HDIHGPAFDVRLDGFGTFGGRKPRALWAGVAAHPE-LDSLQSRIEQAARDVGLEAESRKF 117 Query: 123 HPHITLL--------RDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 PH+TL R A+ P F VT FTLY S Y L + L Sbjct: 118 TPHVTLAWLKAAPPERIAAFVAHHSP--FTALLPVTGFTLYRSHLGGEGAEYEALAEYFL 175 Query: 175 TQ 176 Sbjct: 176 DH 177 >UniRef50_Q3A1W4 2'-5' RNA ligase n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1W4_PELCD Length = 192 Score = 144 bits (364), Expect = 1e-33, Method: Composition-based stats. Identities = 45/184 (24%), Positives = 69/184 (37%), Gaps = 13/184 (7%) Query: 4 PQRLFFAIDLPAEIREQIIHWRATHFPP-EAGRPVAADNLHLTLAFLGEVSAEKEKALSL 62 R F A L + E+I+ + + R V + +HLTLAFLG++S E + + Sbjct: 3 TVRAFIAAPLDGPVFEKIVRLQQELSAALPSVRWVRPETMHLTLAFLGDISEESLEKIGG 62 Query: 63 LAGRIR--QPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQ 117 I T+ + G + R RVVWLG+ Q L L + + Sbjct: 63 SMLSIGSVFAPVTVDVGGLGAFPSLKRPRVVWLGL-QNANTLCDLQMTITDMLRQLQVSW 121 Query: 118 SNRPFHPHITLLRDASEAVTIPPPGFNW------SYAVTEFTLYASSFARGRTRYTPLKR 171 ++PF PH+TL R I + ++ LY S + P Sbjct: 122 DDKPFKPHLTLGRCRQPVPAIDQRLAPFMERQCGHLRISRLVLYESQLTARGAIHLPRYE 181 Query: 172 WALT 175 LT Sbjct: 182 TPLT 185 >UniRef50_A6FTX1 2'-5' RNA ligase n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FTX1_9RHOB Length = 186 Score = 144 bits (363), Expect = 2e-33, Method: Composition-based stats. Identities = 50/182 (27%), Positives = 68/182 (37%), Gaps = 15/182 (8%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF AI LP +R + ++ GR V DNLHLTLAFL E +A++ L Sbjct: 1 MRLFVAIGLPDVVRAALSRLQSDL---RVGRLVEPDNLHLTLAFLDEQDLPTAEAVNELL 57 Query: 65 GRIRQPGFTLTLDDAGQWLRSRV-VWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 G IR P F L + + R+R + P L+ L +R +G F Sbjct: 58 GDIRAPAFDLRIAGLDVFDRARPRLVFAASDRPEALVSLRKKVRVAVRDAGVDLPRERFR 117 Query: 124 PHITLLRDASEAVTIPPPGFNW-----------SYAVTEFTLYASSFARGRTRYTPLKRW 172 PH+TL R + F LY S+ Y L + Sbjct: 118 PHVTLARLNRALPQFELDKLGAFLESHGDFSLDPFRTDRFGLYRSTLGPDGPEYDLLAEY 177 Query: 173 AL 174 L Sbjct: 178 ML 179 >UniRef50_Q8EP21 ABC transporter permease n=1 Tax=Oceanobacillus iheyensis RepID=Q8EP21_OCEIH Length = 189 Score = 144 bits (363), Expect = 2e-33, Method: Composition-based stats. Identities = 39/189 (20%), Positives = 77/189 (40%), Gaps = 17/189 (8%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGR-PVAADNLHLTLAFLGEVSAEKEKA 59 M F IDLP +++ +I + + + + H+TL FLGE+ ++ Sbjct: 1 MEILSHYFIGIDLPNHVKQNLIEVQQKLPSSFSYKQWTHKFDFHITLTFLGEIDDKQLTN 60 Query: 60 LSLLAGRIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCF 116 + + + F LTLD G + + RV+W G+ L +L + + + Sbjct: 61 VEQYLNNLEKKPFFLTLDQLGVFGNQKQPRVLWAGLEHSNE-LHELHHQISHMLTQLELS 119 Query: 117 QSNRPFHPHITLLRDASEAVTIPP-----------PGFNWSYAVTEFTLYASSFARGRTR 165 + NRP+ PHITL + +++ + S+ V L+ + + + Sbjct: 120 KDNRPYRPHITLAKKWNDSTILLDSNQLDRMQQIGQSVETSFEVETIHLFK-IYPQQMPK 178 Query: 166 YTPLKRWAL 174 Y + ++L Sbjct: 179 YQKYRSFSL 187 >UniRef50_B9LUM8 2'-5' RNA ligase n=7 Tax=Halobacteriaceae RepID=B9LUM8_HALLT Length = 190 Score = 143 bits (362), Expect = 2e-33, Method: Composition-based stats. Identities = 43/191 (22%), Positives = 67/191 (35%), Gaps = 22/191 (11%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 R FFA+DLP ++ ++ +A V + H+TL FLG+++ + + L Sbjct: 1 MRAFFAVDLPDDLAPRVADAQAALGDAAGLALVDPEQTHVTLKFLGDIAEDNDDTTPTLD 60 Query: 65 GRIRQ----------PGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAA 111 I F ++ G + VVW G+ L L L + Sbjct: 61 DVIAAGKQAVETANVDPFECAVEGFGVFPSLDYISVVWAGVDAGSAELTALHEALEVETT 120 Query: 112 RSGCFQSNRPFHPHITLLR--------DASEAVTIPPPGFNWSYAVTEFTLYASSFARGR 163 G N F PH+TL R EAV P + V L +S+ Sbjct: 121 ALGVDPENHAFTPHVTLARMNDARGKELVQEAVRERDPEIG-RFEVDAVRLVSSTLTSDG 179 Query: 164 TRYTPLKRWAL 174 Y + + L Sbjct: 180 PAYETVASFGL 190 >UniRef50_A9IDL0 Putative 2'-5' RNA ligase n=3 Tax=Bordetella RepID=A9IDL0_BORPD Length = 188 Score = 143 bits (362), Expect = 2e-33, Method: Composition-based stats. Identities = 52/165 (31%), Positives = 70/165 (42%) Query: 7 LFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAGR 66 LFFA+ + + W A GR + D LHLTLAFLG V AE+ AL+ R Sbjct: 21 LFFALWPGPALAATLADWAAQAQAACGGRAMRLDTLHLTLAFLGAVDAERAAALAAATAR 80 Query: 67 IRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPHI 126 R + +LD G + R +VW G P L + + L + G + + F PH+ Sbjct: 81 QRAEPGSFSLDRYGTFARQGIVWAGPTLVPPALQRTHDALWNWLEPLGFARPPQAFKPHV 140 Query: 127 TLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKR 171 TLLR A P + + L SS G Y L R Sbjct: 141 TLLRRAPRLDCAPDAPPPVQWQYRRYVLVQSSPQNGVAHYRVLAR 185 >UniRef50_A3ZLX4 2'-5' RNA ligase n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZLX4_9PLAN Length = 189 Score = 143 bits (361), Expect = 3e-33, Method: Composition-based stats. Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 15/184 (8%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEA-GRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 R F A+ + E++ + + A + V DN+H+TL+FLG+++ E+ +S A Sbjct: 5 RCFIAMAVTDEVKRRAQNLIDKLAASNADVKWVEPDNMHITLSFLGDITPEETIDVSRAA 64 Query: 65 --GRIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 G F + G + R R +WLGM Q Q+ + + + A G ++ Sbjct: 65 MRGAESVSSFDFMIGGVGAFPDITRPRTIWLGMTQGHDAFCQMQHAIAEELATIGYPETA 124 Query: 120 RPFHPHITLLRDAS------EAVTIPPPGFNWSYAVT---EFTLYASSFARGRTRYTPLK 170 R +HPH+++ R + + V+ E +YAS R +YT + Sbjct: 125 RKYHPHLSIGRIKRLSSQVERLTELLEEHAEFEAGVSPAMEANIYASQLERRGPKYTLIG 184 Query: 171 RWAL 174 R L Sbjct: 185 RAEL 188 >UniRef50_O26683 UPF0097 protein MTH_583 n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=Y583_METTH Length = 184 Score = 143 bits (361), Expect = 3e-33, Method: Composition-based stats. Identities = 46/185 (24%), Positives = 77/185 (41%), Gaps = 16/185 (8%) Query: 4 PQRLFFAIDLPAEIREQIIHWRATHFPPEA-GRPVAADNLHLTLAFLGEVSAEKEKALSL 62 R F A+DL +R+ + + T +A + V +NLH TL F G+V K + + Sbjct: 2 KVRAFLAVDLDEGLRDHVSRIQDTLKSADAQVKFVEPENLHFTLKFFGDVGEGKLRRIEN 61 Query: 63 LA-GRIRQ-PGFTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQ 117 + +R F +++ AG + RVVWLG+ + P L L + + G Sbjct: 62 VVRDTLRGYEPFEISIRGAGVFPNPRYIRVVWLGV-ENPETFSDLQRSLDMEFVKMGFRP 120 Query: 118 SNRPFHPHITLLRDA--------SEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPL 169 R + PH+T+ R +E + S V+E +L S YT + Sbjct: 121 E-RDYVPHLTVGRVKGPRNRDKLAELIGELQNVEVGSMRVSEVSLKRSELTPAGPIYTDM 179 Query: 170 KRWAL 174 + + L Sbjct: 180 EVFRL 184 >UniRef50_Q0W551 2'-5' RNA ligase n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W551_UNCMA Length = 180 Score = 143 bits (361), Expect = 3e-33, Method: Composition-based stats. Identities = 41/184 (22%), Positives = 70/184 (38%), Gaps = 19/184 (10%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 R F A++L I+E+I F + + V + +H+TL FLG V ++ A++ Sbjct: 2 IRTFIAVNLDPAIKEKIAEAVGD-FNMKGLKTVEPELVHITLKFLGNVEEDRIDAIADAL 60 Query: 65 GR-IRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 + FT T G + RV+W+G P L + A G + R Sbjct: 61 KEGVTVEPFTATFRSIGGFPGTKNPRVIWIGAEGPFEALN---KQVEDALAGIGFEREGR 117 Query: 121 PFHPHITLLRDA---SEAVTIPPPGFNW-------SYAVTEFTLYASSFARGRTRYTPLK 170 F+ H+T+ R E P F + V + S+ + +Y ++ Sbjct: 118 -FNAHVTIGRIKFSTPEQKQRLPLLFEKYRDFYAGTQPVDRIHVMKSTLSPKGPKYEAIR 176 Query: 171 RWAL 174 L Sbjct: 177 EILL 180 >UniRef50_UPI00016C441C 2''''-5'''' RNA ligase n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C441C Length = 191 Score = 143 bits (361), Expect = 3e-33, Method: Composition-based stats. Identities = 45/186 (24%), Positives = 71/186 (38%), Gaps = 15/186 (8%) Query: 4 PQRLFFAIDLPAEIREQIIHWRATHFPPEAG-RPVAADNLHLTLAFLGEVSAEKEKALSL 62 +R F ID+ IR + + G + V +++H+TL FLG+V + A+ Sbjct: 3 RRRTFIGIDIGDAIRGSAKALQKELAKVDPGVKWVTPESMHVTLLFLGDVDDRELHAVCK 62 Query: 63 LAGRIR--QPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARS-GCF 116 +P F+L + G + R +VVW G+ L +L L + G Sbjct: 63 AVAAAARGEPSFSLRVSGLGVFPNARRPKVVWAGVTDGADVLRRLHTALEEKMLALGGYR 122 Query: 117 QSNRPFHPHITLLRDASEAVTIP-----PPGFNWS---YAVTEFTLYASSFARGRTRYTP 168 R + PH+TL R + + P W V E +Y S YT Sbjct: 123 SEERGYTPHLTLGRVNTPEAAVAVAAELPKRTAWQGGRVTVDEVLVYDSELNSDGPVYTV 182 Query: 169 LKRWAL 174 + R L Sbjct: 183 VGRAPL 188 >UniRef50_C9PFM9 Putative uncharacterized protein n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PFM9_VIBFU Length = 179 Score = 142 bits (359), Expect = 4e-33, Method: Composition-based stats. Identities = 52/180 (28%), Positives = 75/180 (41%), Gaps = 5/180 (2%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHF-PPEAGRPVAADNLHLTLAFLGEVSAEKEKA 59 M+ R FFA+ AE + Q+ R G +DN HLTL F+GEV++E Sbjct: 1 MNSDLRCFFALTFAAEEKAQLRRERERLKTHATKGTFTHSDNFHLTLEFIGEVASEHLPT 60 Query: 60 LSLLAGRIRQPGFTLTLDDAGQW--LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQ 117 L L + TL +D G + +++WLG+ Q L+ L LR + A + Sbjct: 61 LKGLLHELECAPMTLHVDHLGHFHIKGRQLIWLGVTQQHD-LMALQAALRMKLADTPFPP 119 Query: 118 SNRPFHPHITLLRDASEAVTIP-PPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ 176 NRP+ PHITL R + P + V L S + Y L+ L Sbjct: 120 ENRPYVPHITLGRHVMLDTRLSDIPMAPLTLVVHSVALMESKHVDNKLIYDVLEEIRLVD 179 >UniRef50_A7NPU2 2'-5' RNA ligase n=2 Tax=Roseiflexus RepID=A7NPU2_ROSCS Length = 201 Score = 142 bits (359), Expect = 5e-33, Method: Composition-based stats. Identities = 45/183 (24%), Positives = 74/183 (40%), Gaps = 17/183 (9%) Query: 6 RLFFAIDLPAEIREQIIHWRATH-FPPEAGRPVAADNLHLTLAFLGEVSAEKEK--ALSL 62 RLF A++LP +RE++ + R V + +HLTL FLG+VS ++ ++L Sbjct: 7 RLFIAVELPNALREELTVLQQRLKRDQPPVRWVEPNAMHLTLWFLGDVSGDQVAHLRVAL 66 Query: 63 LAGRIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 + Q + L G + R +V+W+G+ + L + L + G Sbjct: 67 MLAFAGQQAVRVQLGAPGAFPNLQRPQVIWIGLAEGEMHLRVWYDALARRLPSLGFQPDP 126 Query: 120 RPFHPHITLLRDASEAVTIPPPGFNWS-----------YAVTEFTLYASSFARGRTRYTP 168 RPF PH+TL R +A + + + L+ S RYT Sbjct: 127 RPFRPHLTLGRVRRDASAEQQQRLGAALRSLKLPSDHVWDLQRVVLFRSDLRPEGPRYTA 186 Query: 169 LKR 171 L Sbjct: 187 LAE 189 >UniRef50_Q67NU4 Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67NU4_SYMTH Length = 193 Score = 142 bits (359), Expect = 5e-33, Method: Composition-based stats. Identities = 45/191 (23%), Positives = 71/191 (37%), Gaps = 19/191 (9%) Query: 5 QRLFFAIDLP-AEIREQIIHWRATHFPPEAG-----RPVAADNLHLTLAFLGEVSAEKEK 58 R F A+++ ++R+ ++ + V D H TL F GE+ + + Sbjct: 1 MRCFAAVEVSSPDVRQALVRACDELRRALGADAGLVKWVRPDQFHFTLRFFGELGPTEVE 60 Query: 59 ALSLLAGRIR--QPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARS 113 A + R F L + G + RV+W G + LI LA L + A + Sbjct: 61 AAAQALRRAAAGTAPFPLAVAGLGAFPSARSPRVLWAGTGEGREQLIALARRLEDELAAA 120 Query: 114 GCFQSNRPFHPHITLLRDAS--------EAVTIPPPGFNWSYAVTEFTLYASSFARGRTR 165 G + RPF PH+TL R + PP + V L S R Sbjct: 121 GFGREERPFQPHLTLGRVRQGADLAAPLRGLLTRPPVRYGDWLVDRLVLMRSELLPAGPR 180 Query: 166 YTPLKRWALTQ 176 YT ++ L + Sbjct: 181 YTVVEAAELVR 191 >UniRef50_C0EIB1 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIB1_9CLOT Length = 174 Score = 142 bits (358), Expect = 5e-33, Method: Composition-based stats. Identities = 47/168 (27%), Positives = 72/168 (42%), Gaps = 6/168 (3%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPE-AGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 RLF A+ L + +++ + + G +NLHLTLAFLGE + + A + Sbjct: 1 MRLFIAVQLSSPVKDTLCQAIESLKKRSLQGNFTRRENLHLTLAFLGETA--RLAAAKRV 58 Query: 64 AGRIRQPG-FTLTLDDAGQWLRSRV-VWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 ++ P F+LT+ G++ R +W +P L LA L ++ R+G RP Sbjct: 59 LDELKLPPPFSLTISGLGRFRREGGDIWWAGAEPNDALSDLATQLMARLERTGFPVEKRP 118 Query: 122 FHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPL 169 F PH+TL R P V +L S G YT + Sbjct: 119 FKPHLTLGRQVVLQGR-PEELPPVKMEVDRISLMKSERLAGTLTYTEV 165 >UniRef50_Q64CX2 TRNA nucleotidyltransferase n=2 Tax=environmental samples RepID=Q64CX2_9ARCH Length = 193 Score = 142 bits (358), Expect = 5e-33, Method: Composition-based stats. Identities = 43/188 (22%), Positives = 62/188 (32%), Gaps = 24/188 (12%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAG----RPVAADNLHLTLAFLGEVSAEKEKAL 60 R F A+DL EIRE+I + E + V +H T+ FLGEV + + Sbjct: 1 MRSFIALDLSKEIRERIKEIQKQFVGLEQSGAKLKFVNPWQMHQTVKFLGEVPEDNVDLI 60 Query: 61 SLLAGRIRQPGFTLTLDDAGQWLRS--------RVVWLGMRQPPRGLIQLANMLRSQAAR 112 I Q F + L G + + RV+W+G+ + L L + S+ Sbjct: 61 KNSLSEISQKPFDIELRGVGFFPEAKLEKARNIRVIWIGIWRGIEELKALQADVESKMQV 120 Query: 113 SGCFQSNRPFHPHITLLRDASEAVTIPPPGF-----------NWSYAVTEFTLYASSFAR 161 G R F H TL R V E L S+ Sbjct: 121 LGFPFEKR-FSAHTTLCRVKKPLSREELGPILNKIAGLRDVEAGKMHVEELKLKKSTLTP 179 Query: 162 GRTRYTPL 169 Y + Sbjct: 180 KGPIYEDI 187 >UniRef50_B4X1Z9 2'-5' RNA ligase n=2 Tax=Alcanivorax RepID=B4X1Z9_9GAMM Length = 171 Score = 142 bits (358), Expect = 5e-33, Method: Composition-based stats. Identities = 44/173 (25%), Positives = 63/173 (36%), Gaps = 9/173 (5%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 R F I + + +Q + + GR NLHLTLAFLGE + L Sbjct: 1 MRCFIGIPVTDALADQCVTLSHSM-----GRATPIANLHLTLAFLGEQTQSALSQLHGSL 55 Query: 65 GRIRQ--PGFTLTLDDAGQWLRSRVVWLGMRQPP-RGLIQLANMLRSQAARSGCFQSNRP 121 + P F L+ + + + ++ + L QL + L G RP Sbjct: 56 TELAGENPPFQQLLNRCEPFPQEQGPFMALTGAACPALKQLHHDLWLCLQGYGFSPEERP 115 Query: 122 FHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 F PHITL + G +W V LY S Y PL ++ L Sbjct: 116 FRPHITLAKPGLTQTPFKAIG-DWVLPVNTLVLYRSELGEPFPSYEPLAQFPL 167 >UniRef50_C3NHZ6 2'-5' RNA ligase n=11 Tax=Sulfolobus RepID=C3NHZ6_SULIN Length = 194 Score = 142 bits (358), Expect = 6e-33, Method: Composition-based stats. Identities = 41/179 (22%), Positives = 76/179 (42%), Gaps = 13/179 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF I++P + + + + V N+H+TL FLGEV ++ + + Sbjct: 1 MRLFIGIEVPQSPK-LLEIFEIVKNAGADIKLVEPYNIHITLLFLGEVREDRVEEVKDSM 59 Query: 65 GRIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLAN-MLRSQAARSGCFQSNR 120 ++ F +TL G + R RVVW+G+ + + L Q+ + +L R + ++ Sbjct: 60 SGLKFNKFKVTLKGLGAFPNLTRPRVVWVGIVEGQQQLRQIRSYILNELLKRKIRPEDDK 119 Query: 121 PFHPHITLLRDAS-EAVTIPPPGFNW-------SYAVTEFTLYASSFARGRTRYTPLKR 171 F PH+T+ R S +++ N ++ V L+ S+ Y L Sbjct: 120 DFSPHLTIGRVKSYNSISNLINTINENMNVDIGTFEVNNAVLFKSTLTPKGPIYDKLFE 178 >UniRef50_Q7UM43 Putative uncharacterized protein n=1 Tax=Rhodopirellula baltica RepID=Q7UM43_RHOBA Length = 189 Score = 142 bits (358), Expect = 6e-33, Method: Composition-based stats. Identities = 47/187 (25%), Positives = 67/187 (35%), Gaps = 16/187 (8%) Query: 4 PQRLFFAIDLPAEIREQIIHWRAT-HFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSL 62 R F AI LP+++ W A P + + V +NLHLTL FLGEV + A+ Sbjct: 3 TIRTFLAIPLPSDLARTASRWMAETKSPGDGIKWVPDENLHLTLKFLGEVDNVETPAVCN 62 Query: 63 LAGRIRQ--PGFTLTLDD---AGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQ 117 + F L L+ R RV+ + + L L L + A G Sbjct: 63 TLQAACEDIEPFALVLEGASGIPDLERPRVLTVAVDDATSTLTNLVADLEKRFAAMGYKP 122 Query: 118 SNRPFHPHITLLRDASEAVTIPPPGFN----------WSYAVTEFTLYASSFARGRTRYT 167 R + PH+T+ R S N + V E + S + Y Sbjct: 123 EPRDYRPHLTVGRTRSGTRRANSDVINRWRKFEDDEIGEFNVREIHVVGSFLEKHGPTYN 182 Query: 168 PLKRWAL 174 L R L Sbjct: 183 VLGRVQL 189 >UniRef50_B5IAZ8 2'-5' RNA ligase n=2 Tax=Aciduliprofundum boonei T469 RepID=B5IAZ8_9EURY Length = 176 Score = 141 bits (357), Expect = 8e-33, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 71/178 (39%), Gaps = 13/178 (7%) Query: 4 PQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 R F AI++P ++I + + + V +N+H+TL FLGE+ + + + Sbjct: 5 SMRTFIAIEIP--FFKEIEELQKSIEGR--AKLVEGENMHITLKFLGEIEEKLVDEIKRI 60 Query: 64 AGRIRQPGFTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 + F ++L G + RV+W+G+ ++++A + + ++ G + + Sbjct: 61 VEDCKVEKFKISLQGIGFFPNERYIRVIWIGIDGY-EPIVKMAKCMDEKLSKLGFERE-K 118 Query: 121 PFHPHITLLRDASEAVTIPPPGFN----WSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 + PH+T+ R F V E + S+ Y + L Sbjct: 119 SYVPHLTVARAKGRVAITNYDRFKNLKFGEVNVREVKIKRSTLTPKGPIYEDVAVIQL 176 >UniRef50_A6AKQ4 2'-5' RNA ligase n=3 Tax=Vibrio harveyi RepID=A6AKQ4_VIBHA Length = 173 Score = 141 bits (357), Expect = 8e-33, Method: Composition-based stats. Identities = 39/173 (22%), Positives = 70/173 (40%), Gaps = 5/173 (2%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFP-PEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 RLFFA+ + ++ + GR +N H+TLAF+GE + E+ + L+ + Sbjct: 1 MRLFFALTFDKTSKSKLKQIQEKLKQHGIVGRYTRKENFHITLAFIGESTQEEFEQLTKI 60 Query: 64 AGRIRQPGFTLTLDDAGQWLRS--RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 ++ +T+D G + +S ++ WLG+ + + L L + G R Sbjct: 61 LHNLKSSCKHITVDHLGSFYQSGRQLAWLGI-EDNHAVTNLQTELIEALEQDGFATELRH 119 Query: 122 FHPHITLLRDASEAVTIPPPGF-NWSYAVTEFTLYASSFARGRTRYTPLKRWA 173 + PHITL R + + + L S G+ Y + A Sbjct: 120 YVPHITLARHIDKQAPLDDVKISPLPLPIDAIALMESKTVEGKLIYRAIAEVA 172 >UniRef50_O66967 UPF0097 protein aq_768 n=2 Tax=Aquificaceae RepID=Y768_AQUAE Length = 188 Score = 141 bits (356), Expect = 9e-33, Method: Composition-based stats. Identities = 39/182 (21%), Positives = 68/182 (37%), Gaps = 13/182 (7%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 R F I E + G+ V N+H+TL FLG+++ + + Sbjct: 5 RAFVGFFTSKSINEVAERIKKEVDLKIMGKWVEPQNVHMTLQFLGDITEAQAIEVIKNLQ 64 Query: 66 RIRQP--GFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN- 119 I + F + G + R RV+W+G+ + L LA + A+ G N Sbjct: 65 EISKKNIPFRIKYKGLGVFPDVKRPRVLWIGVSEGANKLTNLAKEVARLNAKKGIIPKNS 124 Query: 120 RPFHPHITLLR----DASEAVTIPPPGFNWSY---AVTEFTLYASSFARGRTRYTPLKRW 172 + F PH+T+ R D + + V + L +S+ YT ++ + Sbjct: 125 KNFVPHVTICRIKSYDRKTLNELLRKYRTVEFGEDEVNKIALISSTLTSVGPIYTVVEEF 184 Query: 173 AL 174 L Sbjct: 185 YL 186 >UniRef50_A4XK57 2'-5' RNA ligase n=2 Tax=Clostridia RepID=A4XK57_CALS8 Length = 183 Score = 141 bits (356), Expect = 9e-33, Method: Composition-based stats. Identities = 49/187 (26%), Positives = 76/187 (40%), Gaps = 20/187 (10%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFP-PEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 R F ID P ++ QI+ ++ + GR DN HLTL FLGE+ EK + + Sbjct: 1 MRTFIGIDFPKSLKVQIVEVQSFLKSISKKGRWKYIDNFHLTLKFLGEIEYEKVEKIKQA 60 Query: 64 AGR--IRQPGFTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQS 118 + F+L + G + RVV+L L L +++ A G + Sbjct: 61 LEKNLKDFSRFSLKIYSCGYFKGHGNLRVVYLKPDGNLEKLNNLFSLVEDAMAEVGFQRE 120 Query: 119 NRPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFT----------LYASSFARGRTRYTP 168 R + PHIT+ +D V + P N+ V F+ L+ S + YTP Sbjct: 121 KREYTPHITIAQD----VVLNEPFENFQKYVENFSFDEIPVEKVILFLSEEIDRKRVYTP 176 Query: 169 LKRWALT 175 + L Sbjct: 177 IFHIELV 183 >UniRef50_A6CQH7 Putative uncharacterized protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CQH7_9BACI Length = 187 Score = 141 bits (355), Expect = 1e-32, Method: Composition-based stats. Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 15/188 (7%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFPP-EAGRPVAADNLHLTLAFLGEVSAEKEKA 59 M +P F+A+ LP + +E+I W + R V ++LH+TLAFLG A K Sbjct: 2 MKQPH-YFYAVPLPWQTQEKIEEWISEVSGTLPFQRWVHPEDLHITLAFLGGTDANSLKR 60 Query: 60 LSLLAGRIRQP-GFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGC 115 +R+ F+L + G + R++W + +L + + S + G Sbjct: 61 SIDRIHELRKGFSFSLEIKKLGTFGNTASPRILWTDVSSSSSL-SELRDSVYSACLQEGY 119 Query: 116 FQSNRPFHPHITLLRDASEA----VTIPPPGF---NWSYAVTEFTLYASSFARGRTRYTP 168 RPF+PHIT+ R ++ P F + V+EF LY + R +Y Sbjct: 120 ELDKRPFNPHITIARKWKGDGKFNYSMLEPFFLSEPLDFRVSEFVLYRTHPDR-LPKYEV 178 Query: 169 LKRWALTQ 176 ++++ L Q Sbjct: 179 VEKFILNQ 186 >UniRef50_C0ZGV0 Putative uncharacterized protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZGV0_BREBN Length = 198 Score = 140 bits (354), Expect = 2e-32, Method: Composition-based stats. Identities = 49/184 (26%), Positives = 68/184 (36%), Gaps = 18/184 (9%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFP-PEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 RLF A+D+PAE I + A R + NLHLTL FLGEV A+ Sbjct: 1 MRLFIALDIPAEAAAYIADVQKRLKQDVTADRWQSLANLHLTLHFLGEVDESLVPAICED 60 Query: 64 AGRIRQ--PGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAA-RSGCFQ 117 + TL + G + RV+WLG+R L QL +L + G Sbjct: 61 MDIVSAIIQPMTLRVGSFGVFPNALHPRVLWLGLRGQLSPLKQLHLLLGRRFELHEGLSY 120 Query: 118 SNRPFHPHITLLRDASEAVTIPPPGFNW----------SYAVTEFTLYASSFARGRTRYT 167 + + PHITL R + +W + F LY S +T Sbjct: 121 DRKQYRPHITLARGPHRSGNELAL-LDWNERYLAQEPPQWKARHFHLYRSELLPEGAVHT 179 Query: 168 PLKR 171 + Sbjct: 180 IIHT 183 >UniRef50_C7LNR7 2'-5' RNA ligase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LNR7_DESBD Length = 184 Score = 140 bits (354), Expect = 2e-32, Method: Composition-based stats. Identities = 41/184 (22%), Positives = 69/184 (37%), Gaps = 12/184 (6%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGR--PVAADNLHLTLAFLGEVSAEKEKALSL 62 RLF I LP E + I + + V D H+TL FLGEV ++ A+ Sbjct: 1 MRLFIGIPLPGEYAQIIGRIQEAWKKRLTSKMSWVRPDLAHVTLKFLGEVDEDRVVAIVQ 60 Query: 63 LAGRIRQPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 + F + G + RV+W+G+RQ L A++G + Sbjct: 61 AMREAARGSFEMQGGAGGFFPPKGAPRVIWVGLRQGREECAAYFEELDGGLAQAGFVAES 120 Query: 120 RPFHPHITLLRDASEAVT------IPPPGFNWS-YAVTEFTLYASSFARGRTRYTPLKRW 172 +PF H+T+ R + + + +W + V+ L+ S Y + Sbjct: 121 KPFAAHLTVARVKAAMRSDDWSGLLVDLKRDWPAFTVSHVVLWQSILKSSGPEYRRVAEV 180 Query: 173 ALTQ 176 L + Sbjct: 181 GLEK 184 >UniRef50_A3UI27 Putative uncharacterized protein n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UI27_9RHOB Length = 187 Score = 140 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 44/185 (23%), Positives = 69/185 (37%), Gaps = 20/185 (10%) Query: 4 PQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 R+F A+ L + +Q A +NLH+TL F GE+ + L Sbjct: 7 SLRVFAALPLSDTVADQAC---AEMTGVPDANWRPRENLHITLCFYGELDEPVIEELDSA 63 Query: 64 AGRIRQPGFTLTLDDAGQWLR--SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 G++R F L L+ AG++ +WLG+ P L+ LA R A ++G R Sbjct: 64 LGQVRLAPFELRLEGAGRFGGGDPSAIWLGVEHHP-ALMDLARQCRKAARQAGVEIEKRA 122 Query: 122 FHPHITLLR--------DASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTR----YTPL 169 + PH+TL + + V F LY+S + Y Sbjct: 123 YLPHLTLAYLNRDVDMGRVQRFEQRLGLFKSVPFTVDRFHLYSSW--ARKPHTPNLYRIE 180 Query: 170 KRWAL 174 + L Sbjct: 181 TEYPL 185 >UniRef50_Q9K7T9 ABC transporter (Permease) n=1 Tax=Bacillus halodurans RepID=Q9K7T9_BACHD Length = 186 Score = 139 bits (352), Expect = 3e-32, Method: Composition-based stats. Identities = 42/189 (22%), Positives = 73/189 (38%), Gaps = 21/189 (11%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFPP-EAGRPVAADNLHLTLAFLGEVSAEKEKA 59 M+ F AI LP EI++Q+ + H + ++ H+TL FLG ++ + Sbjct: 1 MTHTH-YFLAISLPDEIKKQLDTFVQRHKQSLPFKKWTHLEDYHITLVFLGAQPHDRLER 59 Query: 60 LSLLAGRI--RQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSG 114 L ++ F + L+ + R R+ W G+R L +++ + Sbjct: 60 LVTACQKLGEHITSFPIQLEGLSTFGQEERPRIFWAGVRDSAE-LSAFQQSVKTCCQQEE 118 Query: 115 CFQSNRPFHPHITLLRD---------ASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTR 165 RP+ PH+TL + + V+ PP VT F LY S + Sbjct: 119 ISVERRPYRPHVTLAKKWIGKGSFKEVASEVSQPPARL---LHVTSFHLYRSHIGKT-PS 174 Query: 166 YTPLKRWAL 174 Y + + L Sbjct: 175 YEITESFPL 183 >UniRef50_B8GVT8 2'-5' RNA ligase n=2 Tax=Caulobacter vibrioides RepID=B8GVT8_CAUCN Length = 179 Score = 139 bits (352), Expect = 3e-32, Method: Composition-based stats. Identities = 45/180 (25%), Positives = 72/180 (40%), Gaps = 14/180 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF AI +P +I + ++ + E R + H+TL F+G+V+ + L Sbjct: 2 IRLFTAIAIPPQIGQGLLPRQG---GIEGARWRPLEAFHITLRFVGDVAEDLAADLDEAL 58 Query: 65 GRIRQPGFTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 +I P F L L AG + VW G+ + L QL A +G +R Sbjct: 59 AQITAPAFDLELASAGHFGEGADIHAVWAGVDESAP-LRQLQKSHERAARTAGLKPESRL 117 Query: 122 FHPHITLLRDASE-------AVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 + PH+TL + + S+ V F LY+S R + Y + + L Sbjct: 118 YTPHVTLAYLKRPSVPEVGAWLQANNLLRSPSFRVDRFGLYSSWQTREGSAYRLEREYLL 177 >UniRef50_D1YUN2 2'-5' RNA ligase n=1 Tax=Methanocella paludicola SANAE RepID=D1YUN2_METPS Length = 181 Score = 139 bits (351), Expect = 4e-32, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 63/185 (34%), Gaps = 18/185 (9%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 R F +++L IR++I F + + V +H+TL FLG + K + Sbjct: 2 IRAFISVNLTPGIRQKIGEA-ERDFDMKGIKLVEPSLIHVTLKFLGNIEEAKVGEIEAAL 60 Query: 65 GRIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 ++ F + G + RV+W+G +L + + G + R Sbjct: 61 KKVSVRPFKARMRSLGGFPNPRNPRVIWVGAEGD---FAELNKQVEALMEEIGFPREGR- 116 Query: 122 FHPHITLLRDASEAVTIPPPGFNW----------SYAVTEFTLYASSFARGRTRYTPLKR 171 F PH+T+ R V L S+ + RY LK Sbjct: 117 FQPHVTIGRVKFPTPEQKQDLPGLFEKYKDFDAGEMTVDSIHLMKSTLSPKGPRYDVLKE 176 Query: 172 WALTQ 176 L + Sbjct: 177 IPLAR 181 >UniRef50_C6CZ97 2'-5' RNA ligase n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CZ97_PAESJ Length = 192 Score = 139 bits (351), Expect = 4e-32, Method: Composition-based stats. Identities = 50/193 (25%), Positives = 79/193 (40%), Gaps = 18/193 (9%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGR-PVAADNLHLTLAFLGEVSAEKEKA 59 M++ R+F AI +PA I QI+ + R V +LH+TL F+G++ Sbjct: 1 MADNIRIFTAISIPANITGQIVSHLPDWKNQLSFRKWVDPRDLHITLHFIGDMPVSSIPT 60 Query: 60 LSLLAGRI--RQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAAR-S 113 + R F+L L + R V+WLG++Q P L+ L +L Sbjct: 61 IQAAMQETASRSSSFSLELSKLDCFGREERPSVLWLGIKQLPAELLGLHQLLGQSLHSGI 120 Query: 114 GCFQSNRPFHPHITLLRDAS----------EAVTIPPPGFNWSYAVTEFTLYASSFARGR 163 G RP+ PH+TL R S E ++ P ++ +T TLY + R Sbjct: 121 GYSPETRPYRPHVTLARKYSADEPCTAGKLEELSSPLLQHQTAFDITGITLYRTRLGE-R 179 Query: 164 TRYTPLKRWALTQ 176 Y P+ + Sbjct: 180 PMYEPIASAQFDK 192 >UniRef50_Q45633 UPF0097 protein in malA 3'region n=9 Tax=Bacteria RepID=YMA3_BACST Length = 314 Score = 139 bits (350), Expect = 4e-32, Method: Composition-based stats. Identities = 44/186 (23%), Positives = 72/186 (38%), Gaps = 15/186 (8%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGR-PVAADNLHLTLAFLGEVSAEKEKA 59 M F A+ L +E ++ I + R V ++ H+TLAFLG+V K Sbjct: 1 MKRSH-YFIAVPLTSEAKQAISRFSGDASSSLPFRTWVHEEDYHITLAFLGDVPPGKMAP 59 Query: 60 LSLLAGRIRQP--GFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSG 114 L + F+L L G + R+ W G+++ L +L + G Sbjct: 60 LCEAMAAVAAKSAPFSLALAGLGTFGERTAPRIFWQGVKEE-AALNELRRDVYEACLSLG 118 Query: 115 CFQSNRPFHPHITLLRDASEAVTIPP------PGFNWSYAVTEFTLYASSFARGRTRYTP 168 RPF PHIT+ R P P + ++V E LY ++ + +Y Sbjct: 119 FSLDRRPFAPHITIARKWQGEAPFQPEALRSLPAASTVFSVPEIVLYRTNMEKT-PKYET 177 Query: 169 LKRWAL 174 + + L Sbjct: 178 IAAFPL 183 >UniRef50_A6FXB0 2',5' RNA ligase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FXB0_9DELT Length = 180 Score = 138 bits (349), Expect = 6e-32, Method: Composition-based stats. Identities = 45/181 (24%), Positives = 70/181 (38%), Gaps = 14/181 (7%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF AIDLP I ++ R R + LHLTL F+GEV + + L G Sbjct: 3 RLFLAIDLPDPIDFELELLRG---GIHGARWQTREQLHLTLHFIGEVDGGEARRLRAALG 59 Query: 66 RIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 + P F L L +G + ++ +W+G R+ L L + + R + Sbjct: 60 ALESPAFELELFGSGVFPPRGQANTLWIGARESDP-LRLLHQRTAAILDAQQLPRERRKY 118 Query: 123 HPHITLLRDASEA-------VTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALT 175 PH+T+ R V + S+ V LY+S +Y + L Sbjct: 119 TPHVTVARLKRAPAQEVGAWVAAHSSFASPSFPVRAVQLYSSVLTSAGAKYRIDAEFPLG 178 Query: 176 Q 176 + Sbjct: 179 E 179 >UniRef50_C1YG14 2'-5' RNA ligase n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YG14_NOCDA Length = 196 Score = 138 bits (349), Expect = 6e-32, Method: Composition-based stats. Identities = 54/182 (29%), Positives = 70/182 (38%), Gaps = 13/182 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAG-RPVAADNLHLTLAFLGEVSAEKEKALSLL 63 RLF A+D P + + G R HLTL FLGEV AL Sbjct: 1 MRLFAALDPPPDTAHALRRAVDRGRGHTPGLRWADPGEWHLTLVFLGEVDEALLPALGDA 60 Query: 64 AGRIR--QPGFTLTLDDAGQWL----RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQ 117 GR F +T + G + R+ V+W G+ L LA+ LR+ AA G Sbjct: 61 LGREARGHRPFRITAEGWGAFPGDLRRASVLWAGLGGDTASLHALADGLRAAAAEVGVPV 120 Query: 118 SNRPFHPHITLLRDASEA-----VTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRW 172 NRP+ PHIT+ R P + V E L S R RY ++ W Sbjct: 121 ENRPYVPHITVARSRPARDLTGTADALGPLPGHGWPVREAHLVESRPERE-DRYRTVRTW 179 Query: 173 AL 174 L Sbjct: 180 RL 181 >UniRef50_A6TLD2 2'-5' RNA ligase n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TLD2_ALKMQ Length = 182 Score = 138 bits (349), Expect = 7e-32, Method: Composition-based stats. Identities = 44/177 (24%), Positives = 74/177 (41%), Gaps = 14/177 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFP-PEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 R+F AI+L E+++++ + + G+ N HLTL F+GEV + K++ Sbjct: 1 MRVFIAIELEEEVKKKVEKIQKKLKSYAQKGKFTDPGNFHLTLRFIGEVGEAEIKSIKNA 60 Query: 64 AGRIRQPG--FTLTLDDAGQWLRSR--VVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 + F L +D G + + +VW+G++ L L L G + Sbjct: 61 IEKTATKEGFFELVMDQVGSFPKKNKEIVWVGVKGELDRLQNLYKDLEDALEGEGFLKEG 120 Query: 120 RPFHPHITLLRDASEAVTIPPPGFNWSYAVTE-------FTLYASSFARGRTRYTPL 169 R ++PHITL R+ + P P V E +L S G+ Y P+ Sbjct: 121 RQYNPHITLGREI--VLNRPLPSIQEEIKVMESILSVQKISLMESVRINGKLVYRPI 175 >UniRef50_D2R085 2'-5' RNA ligase n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R085_9PLAN Length = 189 Score = 138 bits (348), Expect = 7e-32, Method: Composition-based stats. Identities = 42/187 (22%), Positives = 68/187 (36%), Gaps = 15/187 (8%) Query: 3 EPQRLFFAIDLPAEIREQIIHWRATHFPPEA-GRPVAADNLHLTLAFLGEVSAEKEKALS 61 R F A++L + + A EA V +HLTL FLG+V + + Sbjct: 2 RRIRSFIAVELSGSVIAKAQKLAAAIAGDEAEINWVDTTAMHLTLKFLGDVPETEMNDIC 61 Query: 62 LLAGRIRQ--PGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQA-ARSGC 115 + + F L G + + +W+G+R L +L + + G Sbjct: 62 RVVEATAKTVEPFELMFRGIGAFPDLTNPKSLWMGLRGGQEELAELYTAIDVAMKEKLGF 121 Query: 116 FQSNRPFHPHITLLRDASEAVT-------IPPPGFNWSY-AVTEFTLYASSFARGRTRYT 167 + R F PH+T+ R F+ AV E T++AS R Y Sbjct: 122 PRERRAFQPHVTIGRIKHLHDPAGLAEKFAAMSSFDGDLCAVDEVTVFASFLGRSGPTYD 181 Query: 168 PLKRWAL 174 P+ + L Sbjct: 182 PIGSYEL 188 >UniRef50_Q0F3T5 2`-5` RNA ligase, putative n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F3T5_9PROT Length = 198 Score = 138 bits (348), Expect = 8e-32, Method: Composition-based stats. Identities = 49/190 (25%), Positives = 71/190 (37%), Gaps = 18/190 (9%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRA---THFPPEAGRPVAADNLHLTLAFLGEVSAEKE 57 MS RLF A+++P I+ +I W P+ R V H+TLAF G+VS Sbjct: 1 MSR-MRLFAALEVPEAIKYEINAWWQLAYPRLGPDLWRAVLPHQWHMTLAFYGDVSGRDA 59 Query: 58 KALSLLAGRI--RQPGFTLTLDDAGQWL---RSRVVWLGMR--QPPRGLIQLANMLRSQA 110 L+ + P L L G + R R W G+ L LA R Sbjct: 60 DDLAEMLAVCADASPRLHLCLTGCGIFPQASRPRTFWAGVESLSADPALKHLARCCRRAG 119 Query: 111 ARSGCFQSNR--PFHPHITLLRDASEAVTI-----PPPGFNWSYAVTEFTLYASSFARGR 163 + ++ R PF HITL R + PP ++ L+ S Sbjct: 120 HVTVRNRTAREAPFRAHITLARANGHLPALLDLQALPPVPELNWQADHLCLFQSILHADG 179 Query: 164 TRYTPLKRWA 173 +Y L+R+ Sbjct: 180 AQYRQLERFE 189 >UniRef50_C8WMV6 2'-5' RNA ligase n=2 Tax=Coriobacteriaceae RepID=C8WMV6_EGGLE Length = 182 Score = 137 bits (347), Expect = 1e-31, Method: Composition-based stats. Identities = 53/175 (30%), Positives = 71/175 (40%), Gaps = 6/175 (3%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 R F A+DLP + + GR + D HLTLAFLG+V + A + Sbjct: 1 MRTFIALDLPPDFADDAAALARRLSASMEGRFLKRDTYHLTLAFLGDVDEAQLAAATDAL 60 Query: 65 GRIR--QPGFTLTLDDAGQWLRSR--VVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 L D G++ R+ +WLG+ P L QLA LR + + Sbjct: 61 EAACAGASPVPLRSDGLGKFGRATDATLWLGIAAAPE-LEQLAARLRDELRARDVPFDAK 119 Query: 121 PFHPHITLLRDAS-EAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 PF H TL R A V +P F + T+ TLY S+ R Y PL L Sbjct: 120 PFKAHFTLARRARIPHVGLPHLAFPQNDEATDVTLYKSTLDRAGAVYKPLHTVCL 174 >UniRef50_B7GK61 2'-5' RNA ligase n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GK61_ANOFW Length = 188 Score = 137 bits (345), Expect = 2e-31, Method: Composition-based stats. Identities = 47/180 (26%), Positives = 83/180 (46%), Gaps = 13/180 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 F AI LP E+++Q+ + + P V ++ H+TLAFLG + E+ K ++ Sbjct: 13 MHYFLAISLPNELKKQLHSFISEWKAPFRL-FVHEEDYHITLAFLGRATEEERKQIAEYM 71 Query: 65 GRI--RQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 ++ + F+L L + + SR++W G+++ R L L + + G RPF Sbjct: 72 PKVVRKHRAFSLQLSEVYSFG-SRILWYGVKEESR-LFSLRQDVYDVCRQIGFSLDARPF 129 Query: 123 HPHITLLRDAS-------EAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALT 175 PHITL + + E G + + V + LY + + +Y PL R+ L+ Sbjct: 130 TPHITLAKKWNGSFPFSLETYPRKIEGEDIRFFVHDVVLYETHMDQT-PKYKPLMRFPLS 188 >UniRef50_B5HLE7 2',5' RNA ligase n=6 Tax=Streptomyces RepID=B5HLE7_9ACTO Length = 190 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 46/186 (24%), Positives = 72/186 (38%), Gaps = 16/186 (8%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAG---RPVAADNLHLTLAFLGEVSAEKEKALS 61 RLF A+ P ++ E++ A R H TLAF GEV + LS Sbjct: 1 MRLFAAVLPPQDVTEELAAVVAELRRLPGAEGLRWTGVPGWHFTLAFYGEVDDDVVPELS 60 Query: 62 LLAGRI--RQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQ-S 118 R R P F L + G++ R +W G L LA + ++G Sbjct: 61 ERLERAARRTPCFPLAVRGGGEFGHGRALWAGASGELPALRLLAERAEAAGRKAGVEMGE 120 Query: 119 NRPFHPHITLLR-----DASEAVTIPPPGFNWSYAVTEFTLYASSFARGR-----TRYTP 168 +R + H+T+ R + +++ + ++ V E L S+ R RY Sbjct: 121 HRRYKAHLTVARSRGAVEVRPYLSVLDGFTSRTWTVDELALVRSNLPRSGVPGEQPRYEV 180 Query: 169 LKRWAL 174 + RWAL Sbjct: 181 VGRWAL 186 >UniRef50_Q65G06 2'_5' RNA ligase YtlP n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65G06_BACLD Length = 201 Score = 136 bits (343), Expect = 3e-31, Method: Composition-based stats. Identities = 41/176 (23%), Positives = 70/176 (39%), Gaps = 11/176 (6%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL 60 MS F I +PAE+ + + ++ R V + H+TL FLG E+ L Sbjct: 1 MSVKPHYFIGIPIPAELSDPLYQTVSSRPEFSFHRWVHPLDYHITLVFLGSAEKEQLAML 60 Query: 61 SLLAGRI--RQPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGC 115 + I F L + G + + R++ + + L + ++ A +G Sbjct: 61 AGSLKLISDETAPFQLAIKRFGTFGKPSEPRILHVEP-EYSAALFHVREQVKHAADAAGF 119 Query: 116 FQSNRPFHPHITLLRD----ASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYT 167 RPFHPH+T+ R AS + P S+ FT++ + R +Y Sbjct: 120 EIEKRPFHPHVTVARKWNGSASFNGRLEPLEDAVSFTARHFTIFQTHLDR-LPKYE 174 >UniRef50_UPI0001C41DA7 2''-5'' RNA ligase LigT n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41DA7 Length = 191 Score = 136 bits (342), Expect = 4e-31, Method: Composition-based stats. Identities = 38/187 (20%), Positives = 74/187 (39%), Gaps = 16/187 (8%) Query: 2 SEPQRLFFAIDLPAEIREQIIHWRATHFPPE-AGRPVAADNLHLTLAFLGEVSAEKEKAL 60 E R F AI+L + I+ + + + V A+N+H TL F G + + + + Sbjct: 6 KETIRSFLAIELDESLVPPILDVQGDFKKTDTKIKYVPAENMHFTLKFFGNIDEDIVEDI 65 Query: 61 SLLAGRIRQ--PGFTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARSGC 115 S +I + F L +++ G + +V+WLG+ + + + L L + + G Sbjct: 66 SGAVEKIIKNYSSFELKIENCGCFPNQKVIKVLWLGIDKDSK-ITDLQKELDKEFKKLGF 124 Query: 116 FQSNRPFHPHITLLRDAS--------EAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYT 167 + R + H+T+ R S + + S V L S+ Y Sbjct: 125 KKE-RNYISHLTIGRVKSPKNKNEIRDVIEKNKNIKIGSMTVNRVCLKKSTLTPQGPIYE 183 Query: 168 PLKRWAL 174 ++ + L Sbjct: 184 NIRVFDL 190 >UniRef50_C1CXY4 Putative 2`-5` RNA ligase n=1 Tax=Deinococcus deserti VCD115 RepID=C1CXY4_DEIDV Length = 244 Score = 136 bits (342), Expect = 4e-31, Method: Composition-based stats. Identities = 43/175 (24%), Positives = 66/175 (37%), Gaps = 9/175 (5%) Query: 3 EPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSL 62 RLF+A+ +P +I + + R V D +H+TLA+L V+ E+ L Sbjct: 63 RTLRLFYALRVPTDISGPLAEAQRALRG--NWRAVRRDQMHVTLAYLPSVAPERLDDLKR 120 Query: 63 LAGRIRQP--GFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQ 117 L + Q + L G + RV + + GL +LA LR Sbjct: 121 LGALLTQDVVPMEVRLRGTGYFPNEGSPRVWFAKVEA--EGLTELATKLREGIRNLDIQT 178 Query: 118 SNRPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRW 172 + PF HITL R A + P F+ + LY S + Y + Sbjct: 179 DDLPFKAHITLARKKGPAPRVAPLTFDLGWQAGHAVLYRSILRKTGPIYETESTF 233 >UniRef50_A7H7I0 2'-5' RNA ligase n=4 Tax=Anaeromyxobacter RepID=A7H7I0_ANADF Length = 195 Score = 136 bits (342), Expect = 4e-31, Method: Composition-based stats. Identities = 48/191 (25%), Positives = 74/191 (38%), Gaps = 18/191 (9%) Query: 2 SEPQRLFFAIDLPAEIREQIIHWRATHFP-----PEAGRPVAADNLHLTLAFLGEVSAEK 56 + RLF A++ P +R +I A E R V +NLHLT+ FLG V ++ Sbjct: 3 GKTHRLFVALEPPDAVRRRIGARAAALRQAAGRHAEDVRWVPVENLHLTVQFLGAVPEQR 62 Query: 57 EKALSL--LAGRIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAA 111 ++++ A L + AG + R RV+WLG+ L + + A Sbjct: 63 VESVADGVRAAAAASRPLALEVKGAGGFPNARRPRVIWLGLEGDVEAARALVADVGRRLA 122 Query: 112 RSGCFQSNRPFHPHITLLRDASE--------AVTIPPPGFNWSYAVTEFTLYASSFARGR 163 G RP+ H+TL R A+ + E L S + Sbjct: 123 PLGFAPEARPWAAHLTLGRARDPRGAPGLGGALVARAQEDGIPWRAGELVLVESHLSPKG 182 Query: 164 TRYTPLKRWAL 174 RY P+ + AL Sbjct: 183 PRYEPIVQAAL 193 >UniRef50_A3XCV9 2'-5' RNA ligase n=2 Tax=Rhodobacterales RepID=A3XCV9_9RHOB Length = 184 Score = 136 bits (342), Expect = 4e-31, Method: Composition-based stats. Identities = 45/183 (24%), Positives = 68/183 (37%), Gaps = 17/183 (9%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 R F + LP + + + + GR V +NLH+TL+FL + + +AL Sbjct: 1 MRCFLGLALPDRVLDLLERLQEDI---PVGRLVPCENLHITLSFLDDQPEARLEALHQEL 57 Query: 65 GRIRQPGFTLTLDDAGQWLR--SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 R+ L L G RV+ + L L LR++A G F Sbjct: 58 LRLEAAPLRLELRGLGVMGGKSPRVLSAEVTAN-AALTALHRHLRAKAQACGITLPRARF 116 Query: 123 HPHITLLRDASE----------AVTIPPPGFNWS-YAVTEFTLYASSFARGRTRYTPLKR 171 PH+TL R + GF + V + TLY S+ RY L + Sbjct: 117 RPHVTLARFGQRLQPGQLQQIHQLLQHFGGFTTPVFTVQQITLYQSTLLPEGARYEALAQ 176 Query: 172 WAL 174 + L Sbjct: 177 YPL 179 >UniRef50_D1Y2L4 2'-5' RNA ligase n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y2L4_9BACT Length = 194 Score = 135 bits (341), Expect = 5e-31, Method: Composition-based stats. Identities = 46/178 (25%), Positives = 68/178 (38%), Gaps = 14/178 (7%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAG-RPVAADNLHLTLAFLGEVSAEKEKAL---- 60 R FF + L E++++I W A + +G R VA +LH+TL F GE+ + L Sbjct: 5 RCFFCLPLAPELKKEIAAWIAANRAAISGVRWVAEADLHVTLRFCGEIPQAAAQPLGDRA 64 Query: 61 SLLAGRIRQPGFTLTLDDAGQWLRS-RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 L LTL + G + R RV+W G+ L +L ++ +G Sbjct: 65 KNLLAERCAAPLRLTLRETGTFGRPPRVLWAGLGGDTAALERLNALIEGACRDAGLPPDG 124 Query: 120 RPFHPHITLLRDASEAVTIPPPGFNWS--------YAVTEFTLYASSFARGRTRYTPL 169 R F PH+TL R + P + S RY PL Sbjct: 125 RKFSPHLTLARMDASRGFDPAALDALRPWKLAGRGWTADRTIFMRSRLTPAGPRYEPL 182 >UniRef50_C6PE45 2'-5' RNA ligase n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PE45_CLOTS Length = 169 Score = 135 bits (341), Expect = 6e-31, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 67/152 (44%), Gaps = 11/152 (7%) Query: 33 AGRPVAADNLHLTLAFLGEVSAEKEKALSLLAGRI--RQPGFTLTLDDAGQWLRS---RV 87 GR DNLH+TL F GE++ E+ + + I F + L+ G + RV Sbjct: 16 KGRWTNKDNLHITLKFFGEINVEEVNKIREITNNISLSFKSFGIRLNKIGCFEGKDNIRV 75 Query: 88 VWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPHITLLRDASEAVTIPPPGFNWS- 146 +W+ + + L+ L + L ++ +++G + ++ F HIT+ RD + +I + Sbjct: 76 LWVNVV-DDKNLMALHDALETELSKAGYRKDDKKFKTHITIARDITLIKSIEEINSIYKL 134 Query: 147 ----YAVTEFTLYASSFARGRTRYTPLKRWAL 174 + ++ L S + Y P+ L Sbjct: 135 NSDYFMISNIYLMESKLENNKRVYVPIFDVPL 166 >UniRef50_B5Y8R2 2'-5' RNA ligase n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y8R2_COPPD Length = 174 Score = 135 bits (341), Expect = 6e-31, Method: Composition-based stats. Identities = 47/178 (26%), Positives = 73/178 (41%), Gaps = 15/178 (8%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEA-GRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 RLFF I + E+R I E G+ V +NLH+T+ FLGEV EK L+ + Sbjct: 1 MRLFFGIPVSEEVRAFYIETLKPQLEAEFIGKFVETENLHITMLFLGEV--EKVDFLNEV 58 Query: 64 AGRIRQ-PGFTLTLDDAGQWLR-SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 ++ F +T+ G + R RV+++ + + L + + + + R Sbjct: 59 KENLKAITHFQVTVGGYGYFGRPPRVLFMDVTRGIDDLTVVHDAICRSMK----IRDTR- 113 Query: 122 FHPHITLLRDASEAVTIPP-----PGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 F PH+TL R I P +S+ V LY S YT + L Sbjct: 114 FAPHVTLARIKKSPRDIDAVLELMPHKEFSWLVPSVVLYESKLTSKGPIYTVFEEIRL 171 >UniRef50_C6XKV8 2'-5' RNA ligase n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XKV8_HIRBI Length = 179 Score = 135 bits (340), Expect = 7e-31, Method: Composition-based stats. Identities = 41/180 (22%), Positives = 65/180 (36%), Gaps = 13/180 (7%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF A+ +P I E + + + + +N HLTL F G V L Sbjct: 4 RLFAALPIPDHISEMLKSMQNGL---DGAKWRHKENFHLTLNFYGNVEDHTAHDLDAALA 60 Query: 66 RIRQPGFTLTLDDAGQWLR--SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 I P TL L D GQ+ +W G+ L +LA+ + + Sbjct: 61 TINLPPITLRLKDVGQFGGFDPHTLWAGVEANEHIL-KLASKCKRPTRELKLHTDKHTYI 119 Query: 124 PHITLLR-------DASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ 176 PH+TL SE + + + F LY+S + ++ Y + L + Sbjct: 120 PHVTLAYLKNIPPHIVSEYLQRHAMFETPEFTIDRFALYSSRPGKHQSLYEEEASYPLLE 179 >UniRef50_C3BR82 2'-5' RNA ligase n=3 Tax=Bacillus RepID=C3BR82_9BACI Length = 200 Score = 135 bits (340), Expect = 8e-31, Method: Composition-based stats. Identities = 40/176 (22%), Positives = 71/176 (40%), Gaps = 11/176 (6%) Query: 8 FFAIDLPAEIREQIIHWRATHFPPEAGR-PVAADNLHLTLAFLGEVSAEKEKALSLLAGR 66 F A+ LP I+E + +++ R V ++ H+TLAFLG + E+ + + Sbjct: 22 FLAVTLPDHIKEILENYKEEMKDKLPFRSWVYKEDYHITLAFLGSATQEQLQGIEKGLQL 81 Query: 67 IR-QPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 + + LTL + + R+ W G+++ + L + + + R+G RP+ Sbjct: 82 LTNKTELDLTLQNFSIFGLVESPRIFWAGLKEN-QALFDMQKQVHAICERNGFSLETRPY 140 Query: 123 HPHITLLRDASEAVTIPPPGFNW----SYAVTEFTLYASSFARGRTRYTPLKRWAL 174 HPHIT+ R T + TLY S +Y + L Sbjct: 141 HPHITVARKWMGEETFNLKDLKQLDAIVFQADTITLYESH-VHQTPKYKSVYEIKL 195 >UniRef50_A8G077 2'-5' RNA ligase n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8G077_SHESH Length = 224 Score = 134 bits (339), Expect = 8e-31, Method: Composition-based stats. Identities = 54/222 (24%), Positives = 73/222 (32%), Gaps = 50/222 (22%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPP----------------------EAGRPVAADNL 42 +RLF I A EQ++ +A F GR V N Sbjct: 2 KRLFLGISPNALQLEQLLKIQAALFEAGDKERTLVGRDADKNSGSHQYTCVGRRVNKQNF 61 Query: 43 HLTLAFLGEVSAEKEKALSLLAGRI------RQPGFTLTLDDAGQWLRSRVVWLGMRQPP 96 H+TLAFLG VS E + L + P F +TLD W + +V+ L + Sbjct: 62 HMTLAFLGAVSDEMQAQLESTLDSFYAINASQWPSFDVTLDTLTLWRKPQVLCLSGKADD 121 Query: 97 RGLIQLANMLRSQAARSGCF---------QSNRPFHPHITLLRDASEAVTIPPPG----- 142 L + R A +G F F PHITL R A P Sbjct: 122 PNLQIAVDRCRYAAKEAGLFSGKTNKTKTSDELTFTPHITLFRKAKRIPEDHLPQTGLLQ 181 Query: 143 --------FNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ 176 + + + LY S Y L+ WAL + Sbjct: 182 SELMEKSLIPVTLSPQQMHLYESLSTAKGVEYRILRSWALVK 223 >UniRef50_A7VYB6 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VYB6_9CLOT Length = 191 Score = 134 bits (339), Expect = 9e-31, Method: Composition-based stats. Identities = 49/183 (26%), Positives = 72/183 (39%), Gaps = 11/183 (6%) Query: 2 SEPQRLFFAIDLPAEIREQIIHWRAT-HFPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL 60 + RLF AI +++++ R +NLHLTL FLGE+ + + Sbjct: 4 ASVMRLFLAILFEEPVKDRLCEAMELIRRSTRTSRLTRRENLHLTLVFLGEL--REAGKV 61 Query: 61 SLLAGRIRQPGFTLTLDDAGQWLRSR--VVWLGMRQPPRGLIQLANMLRSQAARSGCFQS 118 IR F L + G++ R + W G+ +P L L L++ A G Sbjct: 62 REAMEEIRTGPFPLEIRGLGRFQRDGGDLYWAGI-EPSLPLQNLYLELKNALAGKGIAVE 120 Query: 119 NRPFHPHITLLRDASEAVTIPPPGF-----NWSYAVTEFTLYASSFARGRTRYTPLKRWA 173 +RP+ PH+TL R A E P +L S GR YT L R Sbjct: 121 DRPYRPHLTLARQAVEKPETPFYTLKNRLEPVKTKAAAVSLMKSERIEGRLVYTELYRKE 180 Query: 174 LTQ 176 L + Sbjct: 181 LRE 183 >UniRef50_D2B7J8 2'-5' RNA ligase n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B7J8_STRRD Length = 190 Score = 134 bits (339), Expect = 9e-31, Method: Composition-based stats. Identities = 50/183 (27%), Positives = 73/183 (39%), Gaps = 13/183 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAG-RPVAADNLHLTLAFLGEVSAEKEKALSLL 63 RLF + LP +R+++ H H G R + H+TL+FLGEV L Sbjct: 1 MRLFVGLPLPQRVRDELGHALEPHRAAWPGLRWPDPETWHVTLSFLGEVPETVLPELETR 60 Query: 64 AGRI--RQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSG-CFQ 117 R R TL L AG + R+RV W +R L++LA+ L + A R+G Sbjct: 61 LARAASRYAPMTLLLTGAGAFPSARRARVFWTDVRGCRPRLVRLADSLGAGALRAGAVHA 120 Query: 118 SNRPFHPHITLLRDASEAVTIPP-----PGFNWSYAVTEFTLYASSFARGRTRYTPLKRW 172 R PH+TL R ++A ++ L S RY + + Sbjct: 121 DRRRLRPHLTLARSRADADLQRLVEDFGSFAGTAWEAGSVHLVRSHLGAV-VRYETVAEY 179 Query: 173 ALT 175 L Sbjct: 180 PLV 182 >UniRef50_D2S8G3 2'-5' RNA ligase n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S8G3_9ACTO Length = 188 Score = 134 bits (339), Expect = 1e-30, Method: Composition-based stats. Identities = 54/184 (29%), Positives = 68/184 (36%), Gaps = 13/184 (7%) Query: 3 EPQRLFFAIDLPAEIREQIIHWRATHFPPEAG-RPVAADNLHLTLAFLGEVSAEKEKALS 61 P+RLFFA+ PAE + A R D HLTL FLG V ++ L Sbjct: 5 RPRRLFFAVTPPAEALADLDQALAPLREMPGAPRWTPPDRWHLTLLFLGAVPPDRVAELV 64 Query: 62 LLAGRIR--QPGFTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCF 116 A P TL L AG++ R +V W G+ GL LA L + A Sbjct: 65 AAAAPAVAATPSMTLQLAGAGRFGSRRRPQVFWAGVTGDGDGLGALAGRLAAVARGLRMP 124 Query: 117 QSNRPFHPHITLLRDAS------EAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLK 170 RPF H+TL R + + VTE L S RY + Sbjct: 125 VEERPFRAHLTLGRWRPGRPGDGDLPDRLAGYRGRDWPVTEVELLESHLGPA-PRYDRVA 183 Query: 171 RWAL 174 W L Sbjct: 184 AWPL 187 >UniRef50_Q6MIS1 Putative 2'-5' RNA ligase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MIS1_BDEBA Length = 209 Score = 134 bits (339), Expect = 1e-30, Method: Composition-based stats. Identities = 49/189 (25%), Positives = 75/189 (39%), Gaps = 18/189 (9%) Query: 4 PQRLFFAIDLPAEIREQIIHWRATH-----FPPEAGRPVAADNLHLTLAFLGEVSAEKEK 58 +RLF A++ + + + + V DN H+T+ FLGE E+ + Sbjct: 2 TRRLFLALNATDPLADTFLPTLKKLKINADRRDMTVKWVPTDNYHVTITFLGERPEEEVQ 61 Query: 59 ALSLLAGRIRQ--PGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARS 113 ++ + Q F L ++D G + +RV+WLG+ Q R L Q L + Sbjct: 62 RVADALAHVCQNFAPFDLKIEDVGAFSNEHDARVLWLGV-QNKRSLNQFKEALDRELVDK 120 Query: 114 GCFQ--SNRPFHPHITLL--RDASEAVTIPPPGFNWSY---AVTEFTLYASSFARGRTRY 166 R F PH+T R+ + P S+ VTE LY S+ Y Sbjct: 121 NLLPQIEERAFSPHLTFGRLRNPRSVKDMISPFKRKSFGKIHVTEIVLYESTLQGAFPVY 180 Query: 167 TPLKRWALT 175 PL R LT Sbjct: 181 KPLARCQLT 189 >UniRef50_C4DT00 2'-5' RNA ligase n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DT00_9ACTO Length = 180 Score = 134 bits (337), Expect = 1e-30, Method: Composition-based stats. Identities = 44/180 (24%), Positives = 67/180 (37%), Gaps = 12/180 (6%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF + + + + RP HLTLAF+GE+ + + +S Sbjct: 1 MRLFVGLRPSDAALADLAGYL-PRIGLDGARPTGRQTWHLTLAFIGELDDRRVEDVSAAL 59 Query: 65 GRIRQ--PGFTLTLDDAGQWLR-SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 + + GF L L R S + +G L LA +R+ RSG RP Sbjct: 60 TALSRTTAGFALRLAGGTVLGRTSTALCVGTDGDTTALTALAERVRTGLRRSGVPFDERP 119 Query: 122 FHPHITLLRDASEAVTIPPPGFNW-------SYAVTEFTLYASSFARGRTRYTPLKRWAL 174 F PH+T+ R + + S+ + LY S RY L+R+ L Sbjct: 120 FKPHLTVARPKDLSPAEVQAKVDALGGYNGPSWRAEKLVLYRSHPGPP-VRYEALERFPL 178 >UniRef50_A0LR27 2'-5' RNA ligase n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LR27_ACIC1 Length = 190 Score = 134 bits (337), Expect = 1e-30, Method: Composition-based stats. Identities = 54/188 (28%), Positives = 74/188 (39%), Gaps = 17/188 (9%) Query: 5 QRLFFAIDLPAEIREQIIH-WRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 R+F A+ PA + + H R V D HLTLAF GEVS ++L Sbjct: 1 MRVFAALTPPATAIDHLEHALLGVRRDDVEWRWVLPDRWHLTLAFYGEVSEFTADRVALR 60 Query: 64 AGRI--RQPGFTLTLDDAGQWLRS---RVVWLGMR--QPPRGLIQLANMLRSQAARSGC- 115 R+ RQ L G + R RV+W G+R L +LA+ R+ R+G Sbjct: 61 LERVAGRQAPLQLCFAGVGAFDRPSRARVIWAGVRTIADDGSLARLADRCRAAGRRAGVT 120 Query: 116 -FQSNRPFHPHITLLR------DASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTP 168 Q++R F H+TL R DA + + T L S RY Sbjct: 121 MPQTDRGFRAHLTLARARTNPVDARGFLAALAGYTGPVWTATHLQLIRSFLGPV-PRYET 179 Query: 169 LKRWALTQ 176 L W L+ Sbjct: 180 LGSWPLSD 187 >UniRef50_Q0AXI9 Putative integral membrane transport protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AXI9_SYNWW Length = 190 Score = 133 bits (336), Expect = 2e-30, Method: Composition-based stats. Identities = 46/187 (24%), Positives = 69/187 (36%), Gaps = 19/187 (10%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPE-AGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 R F AI +P +++ I + + V +N HLTL FLGE++ E + + Sbjct: 4 LRAFLAITVPDYLKDYAISLKKQLASIATDVKWVERENYHLTLKFLGEINRELTEKIKKD 63 Query: 64 AGRI--RQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARS-GCFQ 117 + P L ++ G + R RV+WLG+ L L + + G Sbjct: 64 MESVADSCPPLQLEVNKLGVFPNHRRPRVIWLGIEGEMEKLNFLGERVDAHLYTLGGFAA 123 Query: 118 S-NRPFHPHITLLRDASEAVTIPPPGF---------NWSYAVTEFTLYASSFARGRTRYT 167 R F H+TL R SE S+ V EF L S + Y Sbjct: 124 EKKRSF--HLTLGRIRSENNKEALLQQLDLINKKVDKISFPVHEFHLMESQLSSRGPTYL 181 Query: 168 PLKRWAL 174 K + L Sbjct: 182 LHKSFIL 188 >UniRef50_A9KM39 2'-5' RNA ligase n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KM39_CLOPH Length = 176 Score = 133 bits (335), Expect = 2e-30, Method: Composition-based stats. Identities = 41/172 (23%), Positives = 64/172 (37%), Gaps = 8/172 (4%) Query: 5 QRLFFAIDLPAEIREQI-IHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 R+F AI+ EI+ + G +NLHLTLAFLGEV + + L + Sbjct: 1 MRIFIAINFTEEIKHNLYEQILNLKGKSIKGNFTRKENLHLTLAFLGEVDEKHLETLKNV 60 Query: 64 AGRIRQPGFTLTLDDAGQWLRSRVV--WLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 ++ F + L + + + W+G+ P L L L SG + Sbjct: 61 INQLEVSEFPINLSNMSAFHNGDELLPWIGIV-PNTKLQVLQQQLTEGLKASGFAHDEKK 119 Query: 122 FHPHITLLRDASEAVTIPPPGFN----WSYAVTEFTLYASSFARGRTRYTPL 169 F PH+TL R ++ V ++ S G YT + Sbjct: 120 FTPHVTLGRKVLMKSNTELNRYDGLCGKEIVVNAISIMKSERINGILTYTEI 171 >UniRef50_A9HK09 2'-5' RNA ligase n=1 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=A9HK09_GLUDA Length = 179 Score = 133 bits (335), Expect = 3e-30, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 72/182 (39%), Gaps = 16/182 (8%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEV-SAEKEKALSLL 63 RLF AI++ +R+ I R + R + HLTL F+G+V +++ + Sbjct: 1 MRLFVAIEIVPPLRDAIASLRGSL---AGVRWTDPLSYHLTLRFIGDVRDRARQEDIHHA 57 Query: 64 AGRIRQPGFTLTLDDAGQWLRSRV---VWLGMRQPPRGLIQLANMLRSQAAR-SGCFQSN 119 IR P TL+ G + + +W+G+ + L+ L + + R +G Sbjct: 58 LMAIRAPTCTLSPQGPGVFEQEGGLDRLWIGVARSDP-LMHLQRKVDTAIRRAAGLQVER 116 Query: 120 RPFHPHITLLRDASEAVTIPPPGFNW-------SYAVTEFTLYASSFARGRTRYTPLKRW 172 R F PH+T+ A + T FTL+ S + Y PL + Sbjct: 117 RRFLPHVTIGSVARPPPPVMSAWLTQWGTVPPPPADATHFTLFRSLRGPDQPLYDPLAEY 176 Query: 173 AL 174 L Sbjct: 177 PL 178 >UniRef50_D0LIM3 2'-5' RNA ligase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LIM3_HALO1 Length = 298 Score = 133 bits (335), Expect = 3e-30, Method: Composition-based stats. Identities = 49/194 (25%), Positives = 68/194 (35%), Gaps = 23/194 (11%) Query: 6 RLFFAIDLP-AEIREQIIHWRATHFPPE----AGRPVAADNLHLTLAFLGEVSAEKEKAL 60 RLF + L +R+ A A R +A N HLTL FLG E AL Sbjct: 9 RLFLGVQLGVEAVRDAAAVAEALRRRASESELAVRWLAPANYHLTLKFLGWTPPEAVTAL 68 Query: 61 SLLAGR--IRQPGFTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARSGC 115 F L G + RV+W G+ GL +LA +L R G Sbjct: 69 RDALAAPIAEVGRFDLIGRGLGAFPEPAQARVLWAGIDDATGGLAELARVLDDACHRLGF 128 Query: 116 FQSNRPFHPHITLLRDASEAVTIPPPGFNWSY-------------AVTEFTLYASSFARG 162 + R +HPH+TL R + + G VT TL+ S Sbjct: 129 AREARAYHPHLTLGRLKTPSDLAALLGEAAGAGAEGVSAQVFRKTPVTAVTLFESVLKSD 188 Query: 163 RTRYTPLKRWALTQ 176 + Y ++ L + Sbjct: 189 GSEYLLRAQFRLAK 202 >UniRef50_A0NZS8 2'-5' RNA ligase n=2 Tax=Labrenzia RepID=A0NZS8_9RHOB Length = 162 Score = 132 bits (334), Expect = 3e-30, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 58/156 (37%), Gaps = 10/156 (6%) Query: 28 HFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAGRIRQPGFTLTLDDAGQW--LRS 85 R + +N H+TL F+G++ + RIR+ + L+ G + + Sbjct: 6 RGGLRGARWIDPENYHITLRFIGDIDDRTADEVVAALDRIRRDPVEIRLNGLGSFGNGKP 65 Query: 86 RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPHITLLR-------DASEAVTI 138 VW + +P L +L R R + PH+TL R D ++ ++ Sbjct: 66 HAVWARV-EPTAQLAELQAEQERILQRLHLPAERRKYVPHVTLARCKTSTNEDVAKWLSE 124 Query: 139 PPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 + F L+++ + G Y + + L Sbjct: 125 RGNFQAQPFIAGRFVLFSAKSSVGGGPYLVEEAYPL 160 >UniRef50_B0VJL2 Putative uncharacterized protein n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VJL2_9BACT Length = 195 Score = 131 bits (331), Expect = 8e-30, Method: Composition-based stats. Identities = 39/188 (20%), Positives = 71/188 (37%), Gaps = 12/188 (6%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHW--RATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEK 58 M R F A++LP ++ ++ R + P V +NLHLTL F+G+V ++ + Sbjct: 1 MKMMIRTFIALELPKPLKSELGSVVNRYSKTTPPYVNWVKPENLHLTLLFIGDVQPQEIR 60 Query: 59 ALSLLAGR--IRQPGFTLTLDDAGQWL--RSRVVWLGMRQPPRGLIQLANMLRSQAARSG 114 + + + P F + + + ++WL + + +L L + + G Sbjct: 61 IIDEVLAKQLEGFPSFIFRPEGLEFFPSLQPHLLWLKLSSENEDIFKLNRRLLKELSACG 120 Query: 115 CFQSNRPFHPHITLLRDAS------EAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTP 168 + HITL R S E + + L+ S +YT Sbjct: 121 IEADKKAMKLHITLARLKSSLNPALEREIMSRKIKHEPLYFDCLCLFKSQLFPEGPQYTV 180 Query: 169 LKRWALTQ 176 L R+ L Sbjct: 181 LNRYNLIH 188 >UniRef50_Q7P1N0 2'-5' RNA ligase n=1 Tax=Chromobacterium violaceum RepID=Q7P1N0_CHRVO Length = 174 Score = 131 bits (331), Expect = 8e-30, Method: Composition-based stats. Identities = 52/170 (30%), Positives = 73/170 (42%), Gaps = 6/170 (3%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 R F A P E +++ W+A GRP+ A LHLTLAFL +V+ + L+ Sbjct: 1 MRAFLACLPPPECLARLLAWQAGLRKQAGGRPLPAAQLHLTLAFLDDVTPLQL-QLAADC 59 Query: 65 GRIRQPGFT--LTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 PG + LD G W V W G +PP L + L++ +G RP+ Sbjct: 60 AEKAAPGLPPAIVLDRCGSWR--GVGWCGPARPPPALGAWVSQLKAALGAAGIAVEARPY 117 Query: 123 HPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRW 172 PH+TLLR + + + E TL AS G R+ L W Sbjct: 118 RPHLTLLRGLERPLPEQALP-PLALPLEEVTLLASELGAGGVRHHRLDGW 166 >UniRef50_Q2NI02 Predicted 2'-5' RNA ligase n=1 Tax=Methanosphaera stadtmanae DSM 3091 RepID=Q2NI02_METST Length = 183 Score = 131 bits (331), Expect = 9e-30, Method: Composition-based stats. Identities = 40/185 (21%), Positives = 77/185 (41%), Gaps = 17/185 (9%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGR--PVAADNLHLTLAFLGEVSAEKEKALSL 62 R F AI++ ++ +I + T + + V +N+HLTL F GE++ K+K +S Sbjct: 1 MRAFLAIEIEESLKNKIKKTQQTIKNTNSAKIKYVEDENIHLTLKFFGEINQRKQKQISS 60 Query: 63 LAGRIRQ--PGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQ 117 + + + +T+ L G + R RV+W G++ I L L + + G + Sbjct: 61 IIRKTTENYETYTMKLVKVGAFPNMNRPRVIWTGIKDNDTT-INLIKELDDEFNKIGFKK 119 Query: 118 SNRPFHPHITLLRDA--------SEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPL 169 + PHIT+ R S + + + + L +S+ Y + Sbjct: 120 E-HDYTPHITIGRVRDVYNKNNLSNILKQLSKTYYGKMNIKKIHLKSSTLTPTGPIYETV 178 Query: 170 KRWAL 174 + + L Sbjct: 179 EEFIL 183 >UniRef50_A5UJ81 2'-5' RNA ligase, LigT n=3 Tax=Methanobrevibacter smithii RepID=A5UJ81_METS3 Length = 185 Score = 131 bits (330), Expect = 1e-29, Method: Composition-based stats. Identities = 40/188 (21%), Positives = 75/188 (39%), Gaps = 17/188 (9%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEA-GRPVAADNLHLTLAFLGEVSAEKEKA 59 MS+ R F AIDL + + ++ +A + V +NLH TL F G++ E Sbjct: 1 MSQ-IRSFLAIDLDDDFKPKVNKIIKEFKKIDANIKFVDLNNLHFTLKFFGDIDTEGIDL 59 Query: 60 LSLLAGRIR--QPGFTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARSG 114 +S ++ F + + G + + +V+W+G+ + L+QL + L ++ A G Sbjct: 60 ISKKIEKVADDFEPFNIKISGCGAFPNNNHIKVIWIGV-ESDELLVQLHDKLDNEFAAIG 118 Query: 115 CFQSNRPFHPHITLLRDASEAVTIPPPGFNWSYA--------VTEFTLYASSFARGRTRY 166 + + F H+T+ R S + ++ S+ Y Sbjct: 119 FDKDKK-FSTHLTIGRMKSAKGKNQVRDIIEEFENVEIGEMNISNIAFKKSTLKPSGPIY 177 Query: 167 TPLKRWAL 174 LK + L Sbjct: 178 ENLKTYDL 185 >UniRef50_Q6AKT9 Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6AKT9_DESPS Length = 172 Score = 131 bits (329), Expect = 1e-29, Method: Composition-based stats. Identities = 49/177 (27%), Positives = 72/177 (40%), Gaps = 17/177 (9%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF AI LP ++ + + ++ T R V+ LHLTL FLG+V K L Sbjct: 1 MRLFLAIALPRDVEKVLRSYQPT--SEAYIRIVS--QLHLTLHFLGDV---KLAELETAM 53 Query: 65 GRIRQPGFTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 IR F L+LD G + + R +W G+R P L QL + + + + Sbjct: 54 SDIRFKEFKLSLDGLGCFKANGKCRTLWAGVR-PNEALRQLYVRIGKRLEEADFELYSHH 112 Query: 122 FHPHITLLRDASEAVTIPPPGF------NWSYAVTEFTLYASSFARGRTRYTPLKRW 172 + PHI+L R + F + V F LY S Y L ++ Sbjct: 113 YSPHISLARCQRKYSEEKIQHFLQIRTEPLEFRVDHFLLYGSEIINNVPFYRALAKY 169 >UniRef50_Q5UY33 2'-5' RNA ligase n=1 Tax=Haloarcula marismortui RepID=Q5UY33_HALMA Length = 187 Score = 130 bits (328), Expect = 2e-29, Method: Composition-based stats. Identities = 39/187 (20%), Positives = 64/187 (34%), Gaps = 17/187 (9%) Query: 4 PQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 +RLF ++DL + + + + R H+TL FLG+ + ++ + Sbjct: 2 SKRLFVSVDL-DGLGDAVAAVQDRFDGVSGLRLTDPGQAHVTLKFLGDTAPDRVADVVAA 60 Query: 64 AGRI----RQPGFTLTLDDAGQWLR---SRVVWLGMR--QPPRGLIQLANMLRSQAARSG 114 F + G + VVW+G+R Q L L + + G Sbjct: 61 LEAAVEDSGVEPFEADIGGLGVFPSLSYISVVWVGVRDGQGGPELTALHEAIEDRTVAMG 120 Query: 115 CFQSNRPFHPHITLLR--DASEAVTIPPPGFNWS-----YAVTEFTLYASSFARGRTRYT 167 + F PH T+ R A T+ N VTE L S G Y Sbjct: 121 FDSEDHEFTPHATIARMDHAGGKETVQNIVENDDPDVGCLQVTEIRLKESERGPGGPTYR 180 Query: 168 PLKRWAL 174 ++ +L Sbjct: 181 TVESVSL 187 >UniRef50_UPI000196B731 hypothetical protein CATMIT_00742 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B731 Length = 352 Score = 130 bits (328), Expect = 2e-29, Method: Composition-based stats. Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 9/165 (5%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFP-PEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 R F A+ + +E+++H + G+ DNLH+TLAF GE + ++ + + Sbjct: 7 MRQFIALTFNSSFKEELVHIIDSLKEEGIKGKYYDPDNLHMTLAFFGETN--RQDEIMEI 64 Query: 64 AGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 I P T+T + G + + + W+G+++ P L N LR+ + ++PF+ Sbjct: 65 IQSIPFPEITITTNRIGHFKK--IYWVGVKENPE-LDAYVNTLRNTLKQHDIPFDDKPFY 121 Query: 124 PHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTP 168 PHIT+LR A E V L + + +Y P Sbjct: 122 PHITILRKAEEGDRTLQEVSTKDIKVE---LLQAHYLEEGLKYLP 163 >UniRef50_C7Q269 2'-5' RNA ligase n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q269_CATAD Length = 215 Score = 129 bits (326), Expect = 3e-29, Method: Composition-based stats. Identities = 53/214 (24%), Positives = 77/214 (35%), Gaps = 44/214 (20%) Query: 5 QRLFFAIDLPA----EIREQIIHWRATHFPPEAG--RPVAADNLHLTLAFLGEVSAEKEK 58 RLF AI P E+R + + + P R + H+T+AF GEVS +K Sbjct: 1 MRLFVAITPPRAVLLEVRAAVDALKRGNTPGVNALLRWTRPETWHITVAFYGEVSEDKAA 60 Query: 59 ALSLLAGRI--RQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCF 116 L GR+ R L+L AG++ R +W G++ L +LA + A R Sbjct: 61 DLVDRLGRVAARTTPMELSLAGAGRFG-PRALWFGVQGQCDRLGRLAESAGAAARRCHIR 119 Query: 117 QSNRPFHPHITLLRD--ASEAVTIPPP--GFNWSYAVTEFTLYAS--------------- 157 +RP+ PH+TL R VT + + V + S Sbjct: 120 VEDRPYRPHLTLARVNGVPRGVTQDDQTGPLDLAPIVDRLRAFRSPGWLAGEVELFTVAE 179 Query: 158 --------------SFARGRT--RYTPLKRWALT 175 A G RY + W LT Sbjct: 180 VADAPPAANGVNGAHSANGGPYKRYERVAHWPLT 213 >UniRef50_C1P948 2'-5' RNA ligase n=1 Tax=Bacillus coagulans 36D1 RepID=C1P948_BACCO Length = 189 Score = 129 bits (326), Expect = 3e-29, Method: Composition-based stats. Identities = 44/181 (24%), Positives = 77/181 (42%), Gaps = 14/181 (7%) Query: 8 FFAIDLPAEIREQIIHWRATHFPP-EAGRPVAADNLHLTLAFLGEVSAEKEK-ALSLLAG 65 F+A+ LP ++++ A R V D+LH+TLAFLG + + A L+A Sbjct: 6 FYAVLLPEAFKQKLQQATAGLKGSLPFKRWVHRDDLHITLAFLGAAEEAQLEKANRLIAD 65 Query: 66 RI-RQPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 +I L D G + + RV++ G+++ P L L M+ +G RP Sbjct: 66 QIGAFHVLPLVFDHFGTFGKKDEPRVLFAGIQESPP-LSDLETMVAGCCLEAGFSLDRRP 124 Query: 122 FHPHITLLRDA------SEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALT 175 FHPH+TL R ++ + ++ LY ++ +Y ++ + L Sbjct: 125 FHPHMTLARKWDGDRPFADGMLDAFSPEPVPFSADRIVLYRTNL-HQTPKYEIVQSFRLA 183 Query: 176 Q 176 Sbjct: 184 D 184 >UniRef50_C8WVE5 2'-5' RNA ligase n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WVE5_ALIAD Length = 197 Score = 129 bits (326), Expect = 3e-29, Method: Composition-based stats. Identities = 46/183 (25%), Positives = 75/183 (40%), Gaps = 11/183 (6%) Query: 4 PQRLFFAIDLPAEIREQIIHWRATHFPPEAG---RPVAADNLHLTLAFLGEVSAEKEKA- 59 +RLFF ++LP +++I + D HLT+ FLG V + Sbjct: 2 KRRLFFGLELPDAWKDEIAKRCESIRQQGQVVARNWSRKDLYHLTVLFLGAVDPADLERA 61 Query: 60 -LSLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQ---PPRGLIQLANMLRSQAARS-- 113 L+ Q F LT G++ +SRV WLG+ + L L +R + Sbjct: 62 FLAGERAAGAQAPFRLTTGSFGRFHQSRVFWLGLDEAESDLAELTALHRCVRIAVNAALP 121 Query: 114 GCFQSNRPFHPHITLLRD-ASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRW 172 +RP+ PHITL R+ + S+ TE L+ S+ G+ Y ++R+ Sbjct: 122 SVQIEDRPYRPHITLARELRQFSEPELVAPRPLSHVFTELCLFESTRNGGQLAYPVIRRF 181 Query: 173 ALT 175 + Sbjct: 182 PFS 184 >UniRef50_D2L3I4 2'-5' RNA ligase n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L3I4_9DELT Length = 200 Score = 129 bits (325), Expect = 4e-29, Method: Composition-based stats. Identities = 48/192 (25%), Positives = 65/192 (33%), Gaps = 24/192 (12%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAG--RPVAADNLHLTLAFLGEVS---------- 53 R F I LP ++ G PV A N+HLTL FLG V Sbjct: 5 RAFVGIPLPEACQDLAADLGRRLASLAYGAASPVKAGNIHLTLKFLGNVPVGLATGGADG 64 Query: 54 -AEKEKALSLLAGRIRQPGFTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANMLRSQ 109 A++ I FTL L G + R RVVW + LA + + Sbjct: 65 GPAGLPAVAEALAGILFAPFTLRLGGGGFFPGPARPRVVWAALADGAGPCHALARAVEAA 124 Query: 110 AARSGCFQSNRPFHPHITLLR--------DASEAVTIPPPGFNWSYAVTEFTLYASSFAR 161 A G +PF H+TL R D E + + + V TL+ S Sbjct: 125 LAPLGFVPEPKPFTAHLTLARLREPGRGGDWPEMLRLLAAAGWPTVPVGSLTLWRSVLGP 184 Query: 162 GRTRYTPLKRWA 173 R+ L + Sbjct: 185 AGARHEVLAAFP 196 >UniRef50_Q1CXV0 2'-5' RNA ligase n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1CXV0_MYXXD Length = 185 Score = 129 bits (324), Expect = 5e-29, Method: Composition-based stats. Identities = 42/186 (22%), Positives = 60/186 (32%), Gaps = 18/186 (9%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFP-PEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 RLF A+ L I + P R V + LHLTL FLG+V + A+ Sbjct: 1 MRLFTAVTLGPAIEARTTEELHRLRPLAPQARWVKLEGLHLTLVFLGDVDDARLPAIREA 60 Query: 64 AGRI--RQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQS 118 I R F L++ G + RV+W + L L G Sbjct: 61 LAPIGARHSPFVLSVVGGGAFGAPTHPRVLWADVCGATDALKALQADAAQVLRPLGFEPE 120 Query: 119 NRPFHPHITLLRDASEAVTIPPPGFNWSY--------AVTEFTLYASSFARGRTRYTPLK 170 +R + H+TL R + V + L+ S Y P Sbjct: 121 HREYTAHLTLARAKHPRGDAALLACVQALKDTSLGEGRVDQLVLFES----KGGHYLPRV 176 Query: 171 RWALTQ 176 LT+ Sbjct: 177 EVPLTR 182 >UniRef50_Q2RJJ7 2',5' RNA ligase n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RJJ7_MOOTA Length = 185 Score = 129 bits (324), Expect = 5e-29, Method: Composition-based stats. Identities = 42/179 (23%), Positives = 63/179 (35%), Gaps = 17/179 (9%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFP-PEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 RLF AI+ + + +A P + V +++HLTL FLGEV + + Sbjct: 1 MRLFIAINFSTAMVASLARLQAELRQLPVPVKWVNPNSIHLTLKFLGEVDPARLEETGKA 60 Query: 64 AGRIRQP--GFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQS 118 R + L + G + RV+W G+ L L + + G Sbjct: 61 LERATMGINPWDLEVKGTGVFPNWRSPRVIWAGVESEAP-LYDLQRQVTQEYLALGFKAD 119 Query: 119 NRPFHPHITLLRDASEAV-----TIPPPGFNWSY---AVTEFTLYASSFARGRTRYTPL 169 F PH+TL R N S+ VT +L S + Y PL Sbjct: 120 T--FTPHLTLGRLRPGVAGGILREKLQSLANVSWGRERVTAVSLMESQLSPRGANYRPL 176 >UniRef50_O34570 UPF0097 protein ytlP n=2 Tax=Bacillus subtilis group RepID=YTLP_BACSU Length = 183 Score = 128 bits (323), Expect = 6e-29, Method: Composition-based stats. Identities = 35/177 (19%), Positives = 64/177 (36%), Gaps = 11/177 (6%) Query: 8 FFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAGRI 67 F + +P I I + V + H+TL FLG + K L I Sbjct: 9 FIGVPIPEGIANPIYQAAKNEPILTFQKWVHPLDYHITLIFLGAADETQIKKLEGSLAEI 68 Query: 68 RQP--GFTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 F++ + + RV+ L ++ + L +L + ++G RP+ Sbjct: 69 ASEIDPFSIKFGKIDVFGDRRKPRVLHLEPKK-NKTLDRLREHTKQAVLQAGFQVEKRPY 127 Query: 123 HPHITLLRDAS----EAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALT 175 HPH+TL R + +P S F+L+ +Y + ++ L+ Sbjct: 128 HPHMTLARKWTGEDGFPAHVPFESGEVSMMAERFSLFQIHL-NQSPKYEEIFKFQLS 183 >UniRef50_A8PKT4 2'-5' RNA ligase n=1 Tax=Rickettsiella grylli RepID=A8PKT4_9COXI Length = 197 Score = 128 bits (322), Expect = 9e-29, Method: Composition-based stats. Identities = 51/185 (27%), Positives = 73/185 (39%), Gaps = 12/185 (6%) Query: 3 EPQRLFFAIDLPAEIREQIIHWRATHFPPEAG---RPVAADNLHLTLAFLGEVSAEKEKA 59 +P RLFFA++L +E+R + G R V +NLH+TL FLG EK Sbjct: 5 DPLRLFFAVELNSELRRALSQLIDELKQEPWGHRVRWVQPENLHITLRFLGTTLPEKISE 64 Query: 60 LSLLAGRI--RQPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSG 114 L A + F L L + + R + + P L +LAN L A+ G Sbjct: 65 LVKHAHNAINKIEPFPLQLHNIRFFPSPTAPRAIAADII-PTSELFELANALEEVASNLG 123 Query: 115 CFQSNRPFHPHITLLRDASEAVTIPPPGFNW---SYAVTEFTLYASSFARGRTRYTPLKR 171 +P+ PH+TL R N V E L+ S Y PL+ Sbjct: 124 FTPETKPYLPHLTLGRIIHHHAPNLREELNLNTSPMIVNEIVLFNSKKTEYSQNYAPLEY 183 Query: 172 WALTQ 176 +L + Sbjct: 184 ISLQK 188 >UniRef50_A4BK99 2'-5' RNA ligase n=1 Tax=Reinekea blandensis MED297 RepID=A4BK99_9GAMM Length = 171 Score = 128 bits (322), Expect = 9e-29, Method: Composition-based stats. Identities = 46/177 (25%), Positives = 70/177 (39%), Gaps = 14/177 (7%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL 60 M RLFFA+ L ++ ++ W+ + P R V N HLTLA+LGE A L Sbjct: 1 MESSLRLFFALPLESDDAARVAQWQQSIAPQPRVRWVPTQNYHLTLAYLGETDASMIPEL 60 Query: 61 SLLAGR---IRQPGFTLTLDDAGQWLRSRVVWL--GMRQPPRGLIQLANMLRSQAARSGC 115 A + Q +L+ ++ S+ +W G ++PP L + R+ + Sbjct: 61 VDYATEQLDVGQLPIRWSLNHVSRF--SQGIWYLRGYQEPP----ALQHFARALSFLVPL 114 Query: 116 FQSNRPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRW 172 PF PHIT R + P + + +L S RY L W Sbjct: 115 HTQTAPFVPHITFARCDKH---LDTPDIDLAITFRRISLMQSVREGAGVRYRSLHDW 168 >UniRef50_Q2B4M3 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B4M3_9BACI Length = 185 Score = 128 bits (322), Expect = 9e-29, Method: Composition-based stats. Identities = 43/181 (23%), Positives = 75/181 (41%), Gaps = 16/181 (8%) Query: 8 FFAIDLPAEIREQI-IHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAGR 66 FFA+ LP + +E++ + A E + V + H+TLAFLG ++ + + L + Sbjct: 6 FFAVRLPDDAKEKLKLKCEAAAGMLEFQKWVHYQDYHITLAFLGNAGKDQLQHAARLVRK 65 Query: 67 I--RQPGFTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 + F+L+ G + + R+ W PR L ++ + +G RP Sbjct: 66 ALEEEEAFSLSTSRFGVFGKPDQPRIFWSDTAAQPR-LAEVRKKVFDACKEAGFQLETRP 124 Query: 122 FHPHITLLRDASEAVTIPP--------PGFNWSYAVTEFTLYASSFARGRTRYTPLKRWA 173 F PHITL R + + P S+ E LY + R +Y ++ + Sbjct: 125 FKPHITLARKWAGSSPFEPDLLGNESVLTETISFPAAEVVLYQTHMDRS-PKYEAIEVYT 183 Query: 174 L 174 L Sbjct: 184 L 184 >UniRef50_B6J032 2'-5' RNA ligase n=6 Tax=Coxiella burnetii RepID=B6J032_COXB2 Length = 184 Score = 127 bits (321), Expect = 1e-28, Method: Composition-based stats. Identities = 39/177 (22%), Positives = 70/177 (39%), Gaps = 4/177 (2%) Query: 3 EPQRLFFAIDLPAEIREQIIHWRATHFPPEAG-RPVAADNLHLTLAFLGEVSAEKEKALS 61 R F A+ L R+Q+ R + +N HLTL FLG+V+ E + L Sbjct: 6 SSIRTFIAVPLFPAERDQLQTAIKPLIKQWTHLRWLPLENWHLTLRFLGDVTPEALEILR 65 Query: 62 LLAGRIRQP--GFTLTLDDAGQWLRSRV-VWLGMRQPPRGLIQLANMLRSQAARSGCFQS 118 + + F + ++ + ++ + + + L QL L A ++G + Sbjct: 66 QATAKEAKETIKFKININKIDIFPPEKLRLLVAYIERQEHLSQLFFNLDQAAEKAGLARE 125 Query: 119 NRPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALT 175 R F PHITL + P + S E ++ S ++Y PL ++ + Sbjct: 126 ERLFLPHITLAKSRRPIRHFDPLDCDLSIHAEELVIFESRPTNDGSQYVPLYKFQFS 182 >UniRef50_UPI00016981C7 2'''',5'''' RNA ligase n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI00016981C7 Length = 168 Score = 127 bits (321), Expect = 1e-28, Method: Composition-based stats. Identities = 44/146 (30%), Positives = 66/146 (45%), Gaps = 9/146 (6%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL 60 MS R FFA+ E+R QI GR + +LHLTL FLG++ A++ + + Sbjct: 1 MSNS-RAFFALWPDLEVRRQIARV-GRSLNGCGGRMLQPQDLHLTLCFLGDLDAQRRRCV 58 Query: 61 SLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 +A L +D Q+ R+R++W+G + P LI L + L S G N Sbjct: 59 ETVADSFSAAPVVLQIDRIDQFPRARILWVGPLESPPSLITLHDRLSSALQSCGFAPGNP 118 Query: 121 PFHPHITLLRDASEAVTIPPPGFNWS 146 HP AS+ ++ P G W Sbjct: 119 RLHP-------ASDPLSQSPTGRAWQ 137 >UniRef50_B9XIZ0 2'-5' RNA ligase n=1 Tax=bacterium Ellin514 RepID=B9XIZ0_9BACT Length = 203 Score = 127 bits (320), Expect = 2e-28, Method: Composition-based stats. Identities = 41/187 (21%), Positives = 69/187 (36%), Gaps = 18/187 (9%) Query: 6 RLFFAIDLPAEIREQIIHWRATH---FPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSL 62 RLF A+ +P ++E++ ++ P + R D HLTL FLG V ++ LS Sbjct: 12 RLFIALPVPEFVKEELKRVQSELRLNLPGGSVRWTRMDQCHLTLRFLGNVPSDAVSELSA 71 Query: 63 LAGRI--RQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQ 117 R P L + G + R RV+W+G+ L L +L + Sbjct: 72 AVKRSCSEFPLVHLKAERIGFFPNERRPRVIWVGVSDDSGNLRALQAVLSKAVSPFTTEV 131 Query: 118 SNRPFHPHITL-------LRDASEAVTIPPPGFN---WSYAVTEFTLYASSFARGRTRYT 167 + F H+TL RD + + + + S +R++ Sbjct: 132 DAKIFSGHLTLGRIQNLHARDVKMLGDLARGSTDRIFGEWTADRIDIMRSELGAQGSRHS 191 Query: 168 PLKRWAL 174 L+ L Sbjct: 192 CLESITL 198 >UniRef50_Q02C89 2'-5' RNA ligase n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02C89_SOLUE Length = 187 Score = 127 bits (320), Expect = 2e-28, Method: Composition-based stats. Identities = 41/187 (21%), Positives = 64/187 (34%), Gaps = 19/187 (10%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF +DLP E+ + P NLH+T F+GE + L+ Sbjct: 1 MRLFTGLDLPVEVVGNLEELLRRLKPTAQIHWSPPANLHVTTKFIGEWPEARLGELTAAL 60 Query: 65 GRI-RQPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 + + + + G + R+ W G+ P L+ + G R Sbjct: 61 AGVPPRRAIAVNIRRVGFFPNPHSPRIFWCGIEAPGLDLLA--ADTDAATTALGIEPEKR 118 Query: 121 PFHPHITLLRDASEAVTIPPPGFNW-------------SYAVTEFTLYASSFARGRTRYT 167 P+ PH+TL R +A P S+ F LY S+ + YT Sbjct: 119 PYSPHLTLARIKVQANLEQPNLQPLRKTIAALESLEFGSFEARSFFLYRSTLKPTGSVYT 178 Query: 168 PLKRWAL 174 L + L Sbjct: 179 KLAEFPL 185 >UniRef50_A0RYQ5 2'-5' RNA ligase n=1 Tax=Cenarchaeum symbiosum RepID=A0RYQ5_CENSY Length = 175 Score = 127 bits (319), Expect = 2e-28, Method: Composition-based stats. Identities = 47/176 (26%), Positives = 65/176 (36%), Gaps = 14/176 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 R F A+++ + I GR V A+NLH TLAFLGE+ A Sbjct: 1 MRSFVAVEVTDAGALERIASVQRCLAGW-GRQVGAENLHFTLAFLGEIDDAAAAAAGRAL 59 Query: 65 GRIRQPGFTLTLDDAGQWL---RSRVVWLGMRQ-PPRGLIQLANMLRSQAARSGCFQSNR 120 G + FT+ G + RVVW G+ + L LA + + G R Sbjct: 60 GSVSFEPFTVLFRGVGAFPSAKSPRVVWAGVDEKGGGALAALARTV---CSALGVSPDIR 116 Query: 121 PFHPHITLLR-----DASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKR 171 PH+T+LR D +A+ S V L S R Y+ L Sbjct: 117 G-RPHLTMLRIGARKDMRDALGGLGGEELGSQRVDHVKLKKSVLTRQGPVYSDLAE 171 >UniRef50_C9N809 2'-5' RNA ligase n=2 Tax=Streptomyces RepID=C9N809_9ACTO Length = 198 Score = 126 bits (318), Expect = 3e-28, Method: Composition-based stats. Identities = 45/183 (24%), Positives = 70/183 (38%), Gaps = 13/183 (7%) Query: 4 PQRLFFAIDLPAEIREQIIHWRATHFPPEA-GRPVAADNLHLTLAFLGEVSAEKEKALSL 62 R+F A+ P ++++ + R ++ H+TLAFLGE+ L Sbjct: 9 TVRVFVALAPPDRAKDELARELRPAYDTHPHVRWNRIEDWHITLAFLGEIPTATVPLLRP 68 Query: 63 LAGRIRQP--GFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 R+ L L +G + RV+W G+ L LA +R+ G +R Sbjct: 69 PLARLASAHRPPRLALRGSGTFD-DRVLWTGVDGDLDELHLLAADVRTAVKGCGVAFEDR 127 Query: 121 PFHPHITLLR----DASEAVTIPPPGFNWS---YAVTEFTLYASSFAR-GRT-RYTPLKR 171 P PH+TL R D S I + + L S+F R Y ++ Sbjct: 128 PLRPHLTLARARRGDRSSMAEIAEGVAGFDGRRWPAERLHLVGSNFGRSAGPIHYRDIEA 187 Query: 172 WAL 174 WAL Sbjct: 188 WAL 190 >UniRef50_A1WW74 2'-5' RNA ligase n=1 Tax=Halorhodospira halophila SL1 RepID=A1WW74_HALHL Length = 174 Score = 126 bits (318), Expect = 3e-28, Method: Composition-based stats. Identities = 65/174 (37%), Positives = 85/174 (48%), Gaps = 5/174 (2%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL 60 M+E QRLFFA+ PA +RE++ + GRPVAA+ LHLT+AFLG E+ Sbjct: 1 MTERQRLFFALWPPAHLRERLTAVQGEL--GRIGRPVAAERLHLTVAFLGNSDPERATE- 57 Query: 61 SLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 + A GF L LD G ++RS VVW+ + P L L LR + R G R Sbjct: 58 AAAAATREARGFVLRLDRFGHFVRSGVVWMAPTEYPNALETLHRRLRRELRRRGLRTERR 117 Query: 121 PFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 HPH+TL R A+ + P P + + V E TL AS Y W L Sbjct: 118 SLHPHVTLFRKAT--PSGPHPAASLEWPVDELTLVASVTRAEGPEYHRAGAWRL 169 >UniRef50_Q1Z4G8 Putative uncharacterized protein n=2 Tax=Photobacterium profundum RepID=Q1Z4G8_PHOPR Length = 211 Score = 126 bits (318), Expect = 3e-28, Method: Composition-based stats. Identities = 51/204 (25%), Positives = 86/204 (42%), Gaps = 30/204 (14%) Query: 1 MSE-PQRLFFAIDLPAEIRE----------QIIHWRATHFPPEAGRPVAADNLHLTLAFL 49 MS+ ++LFFA+ LP E Q+ + T G+P+ +NLH+TL FL Sbjct: 1 MSDITEKLFFALGLPPITDEKNDCNLKSYQQLCQLKNTVAAEMQGKPIFNNNLHITLVFL 60 Query: 50 GEVSAEKEKALSLLAGRIRQP-GFTLTLDDAGQWLRSRVVWLGM-----------RQPPR 97 G V ++++ L ++ P F+++ + W RS+V+WL +QP Sbjct: 61 GAVKQQQKQRLITNVNQLIAPQAFSVSCSELHYWPRSQVIWLDCHAYHPVHQQRHQQPST 120 Query: 98 GLIQLANMLRSQAARS---GCFQSNRPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTL 154 L L +L+ A + PHITL + + + P + F L Sbjct: 121 SLQTLVCLLQQAAIHVTSDAVSNQASGYIPHITLCKKVTSRPHLSPLPQQLDFHFQHFGL 180 Query: 155 YASSFAR----GRTRYTPLKRWAL 174 Y S + +Y L++W+L Sbjct: 181 YISETIKTAHGSGVQYRCLQQWSL 204 >UniRef50_C5CES3 2'-5' RNA ligase n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CES3_KOSOT Length = 208 Score = 126 bits (318), Expect = 3e-28, Method: Composition-based stats. Identities = 40/179 (22%), Positives = 60/179 (33%), Gaps = 13/179 (7%) Query: 2 SEPQRLFFAIDLPAEIREQIIHWRATH-FPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL 60 R F AID + + V N HLTL+FLGE+ K + L Sbjct: 18 GSKLRTFIAIDTGKGVASVVDMVVDKLKRMGFKASWVPGSNAHLTLSFLGEIEFSKVEIL 77 Query: 61 SLLAGR--IRQPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGC 115 + + + P FT + G + RV+W+G+ + L L +R G Sbjct: 78 ASMLSKRLRGFPSFTFSTKQLGFFRHNNLPRVIWIGV-ENTPFLNNLHREVRVALGSLGL 136 Query: 116 FQSNRPFHPHITLLRDASEAVTIPPPGFNWSY-----AVTEFTLYASSFARGRTRYTPL 169 ++ FHPHIT+ R V +Y S Y + Sbjct: 137 AAEDK-FHPHITVGRMKYSPPYWKKLLATIELEEIVVPVNGVHIYESELLSEGANYRKI 194 >UniRef50_Q21UK0 2',5' RNA ligase n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21UK0_RHOFD Length = 180 Score = 126 bits (317), Expect = 3e-28, Method: Composition-based stats. Identities = 46/172 (26%), Positives = 69/172 (40%), Gaps = 4/172 (2%) Query: 2 SEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALS 61 + QRLF A+ +++ Q++ P A N H+TL F+G V A++ A+ Sbjct: 9 TRTQRLFLALWPDEDVQGQLVAHARQWTWPAGCVQSAPANWHITLHFIGNVDADRVAAIL 68 Query: 62 LLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 A + F L LD W V LG + P L L L RP Sbjct: 69 ASAD-VPFQPFELVLDQPRLWPHGLAV-LGTTEVPMPLRALYERLGYALRGLDLAVETRP 126 Query: 122 FHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWA 173 + PH+T R + A P + V F L S+ R + Y L+++A Sbjct: 127 YQPHVTFAR-RAGAAIPPAAPAPVVWWVRGFVLVVSTGDRAQP-YRALRQYA 176 >UniRef50_A1SDD3 2'-5' RNA ligase n=2 Tax=Nocardioidaceae RepID=A1SDD3_NOCSJ Length = 188 Score = 126 bits (316), Expect = 4e-28, Method: Composition-based stats. Identities = 51/186 (27%), Positives = 78/186 (41%), Gaps = 16/186 (8%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 R+F A+ PAE E + + A R + LH+T+AFL EV + + L Sbjct: 1 MRMFVALVPPAEAVEHLDAFLEPRRSAAAFRWAGVEQLHVTVAFLAEVEERRLEDLVERL 60 Query: 65 GR--IRQPGFTLTLDDAGQWL---RSRVVWLGM---RQPPRGLIQLANMLRSQAARSGCF 116 GR R+ F + G + R+RV+W G+ L +LA R+ A R+G Sbjct: 61 GRAAARRSAFDTAITGGGAFPNVGRARVLWAGLALDEHGRTQLDRLATGCRTAANRAGVP 120 Query: 117 QSNRPFHPHITLLR-----DASEAVTIPPPGFNWSYAVTEFTLYASSFA---RGRTRYTP 168 + F PH+T+ R +A+ V + ++ L AS RGR RY Sbjct: 121 VDGQRFRPHLTVARIAHPTEATSWVRLLDGYAGPAWRADRVELVASYLGEGPRGRPRYET 180 Query: 169 LKRWAL 174 + L Sbjct: 181 VAELEL 186 >UniRef50_C1TRT5 2'-5' RNA ligase n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TRT5_9BACT Length = 194 Score = 125 bits (315), Expect = 6e-28, Method: Composition-based stats. Identities = 43/184 (23%), Positives = 73/184 (39%), Gaps = 14/184 (7%) Query: 6 RLFFAIDLPAEIREQIIHWR-ATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 R F A+ +P ++R + R V ++LHLTL F GE+ + + L+ Sbjct: 5 RSFLALPIPEKLRVLAEELIVQGRREFRSPRWVRGEHLHLTLRFFGELEEKAYRRLAKSL 64 Query: 65 GRIRQPGFTLT---LDDAGQWLRSR---VVWLGMRQPPRGLIQLANMLRSQAARSGCFQS 118 ++ L + G + R V+W+ + + R + +LA + A +G Sbjct: 65 KTAFSDAPSVEGMALGEVGCFRRKGSISVIWMAVEERDRQITRLAELAEKTAVETGLSPE 124 Query: 119 NRPFHPHITLLR---DASEAVTIPPPGFNWS----YAVTEFTLYASSFARGRTRYTPLKR 171 RPF PH+TL R + + V WS + V + L S Y+ Sbjct: 125 RRPFRPHMTLARCHGRSEDIVAYDCVRERWSPTPFFPVEKALLLRSELTPTGPIYSVEGE 184 Query: 172 WALT 175 + LT Sbjct: 185 YPLT 188 >UniRef50_Q5WE85 Putative uncharacterized protein n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WE85_BACSK Length = 186 Score = 124 bits (313), Expect = 9e-28, Method: Composition-based stats. Identities = 42/182 (23%), Positives = 70/182 (38%), Gaps = 10/182 (5%) Query: 1 MSEPQRLFFAIDLPAEIREQII-HWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKA 59 M+E F A+ L +I+ I H R + V + HLT F G + A+K Sbjct: 1 MNELH-YFLALPLSDDIQSAICSHTRRFVHEERFKKWVHPADYHLTYHFFGSLQAKKWAE 59 Query: 60 LSLLAGRIR--QPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSG 114 R+ F L + G + + R+ ++ L+Q + S A+ G Sbjct: 60 TEKELARLTATFTPFVLQFGEYGTFGKEDSPRIFYMKPDPIEDTLVQQHAQVVSLLAQLG 119 Query: 115 CFQSNRPFHPHITLLRDA--SEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRW 172 +RPF PH+T+ R + PP F++S V LY + +Y + + Sbjct: 120 YPVDSRPFSPHVTIARKWVHRKPYVQPPSRFHYSEKVERLCLYKTV-TGQTPKYEEVCSF 178 Query: 173 AL 174 Sbjct: 179 PF 180 >UniRef50_D1A6E1 2'-5' RNA ligase n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1A6E1_THECD Length = 187 Score = 123 bits (310), Expect = 2e-27, Method: Composition-based stats. Identities = 44/186 (23%), Positives = 70/186 (37%), Gaps = 16/186 (8%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAG-RPVAADNLHLTLAFLGEVSAEKEKALSLL 63 RLF A+ P+ + +++ + + VA D +H+TLAFLGE+ + L Sbjct: 1 MRLFVALIPPSAVLDELDRLLVPYRADWPDLKWVARDKMHITLAFLGEIDERALERLLPR 60 Query: 64 AGRIRQPGFTLTLD------DAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQ 117 R + L G +RV+W G+ L +LA + + R+G Sbjct: 61 LERAAGRHPRIELSFAGAGAFPGGGAHARVLWTGVYGDRGVLARLAASVNAAGRRAGIAV 120 Query: 118 -SNRPFHPHITLLRDASEAVTIPPPG-----FNWSYAVTEFTLYASSF---ARGRTRYTP 168 +R F PH+TL R P ++ L S R RY Sbjct: 121 GEHRAFRPHLTLARSRRPTDMRPLIEGLSAYAGTTWTADTVHLVRSHLPGKGRPGLRYET 180 Query: 169 LKRWAL 174 ++ W L Sbjct: 181 IRDWPL 186 >UniRef50_Q07Y05 Putative 2'-5' RNA ligase n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q07Y05_SHEFN Length = 206 Score = 123 bits (310), Expect = 2e-27, Method: Composition-based stats. Identities = 44/182 (24%), Positives = 76/182 (41%), Gaps = 8/182 (4%) Query: 1 MSEPQ--RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVA--ADNLHLTLAFLGEVSAEK 56 M P RLF L ++I+H + T VA A NLH+TL F G++ Sbjct: 26 MQTPSSARLFVGFSLDKPQIDKILHLQQTLITKINTNSVATLAHNLHITLGFFGQIDPTT 85 Query: 57 EKALSLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCF 116 + ++ + F+ +D W ++++ L Q L +AN +++ A Sbjct: 86 CSKIREAINQMPKTTFSQIIDTFAWWQTAQLICLK-GQASASLNTMANDIKNIAKTHHLA 144 Query: 117 QSNRPFHPHITLLRDASEAVTIPPPGFNWSYAV--TEFTLYASSFARGRTRYTPLKRWAL 174 S + PHI+L R + A ++P + + + LY S+ YT ++ W L Sbjct: 145 VSQYDYVPHISLFRGVTTA-SLPTEVKDTQLIIAPSHLHLYQSTGRHNNVNYTIVESWPL 203 Query: 175 TQ 176 Q Sbjct: 204 LQ 205 >UniRef50_Q5FPP9 2'-5' RNA ligase n=1 Tax=Gluconobacter oxydans RepID=Q5FPP9_GLUOX Length = 187 Score = 123 bits (309), Expect = 3e-27, Method: Composition-based stats. Identities = 51/179 (28%), Positives = 83/179 (46%), Gaps = 14/179 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEV-SAEKEKALSLL 63 RLF A+DLPA++RE + R + + V A+N H+TL F+GE+ + + + L Sbjct: 1 MRLFVALDLPADVRETLALMRGSM---PGVQWVPAENHHITLRFIGEITDRHRLEEIDLA 57 Query: 64 AGRIRQPGFTLTLDDAGQWLR--SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 R+ F L+L A + + +G+ + R L L + + S R+GC + R Sbjct: 58 LSRLAWQPFELSLAQADIREGLTADSLLIGVER-TRQLDALQSQVESALRRAGCPPAKRR 116 Query: 122 FHPHITLL------R-DASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWA 173 F P ITL R DA + V + +V T++ S + G Y P + +A Sbjct: 117 FQPAITLGHFFPNQRADAIKWVQRHNLFRSKPMSVEHVTVFESMRSLGEHVYVPREEYA 175 >UniRef50_Q2BKJ4 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BKJ4_9GAMM Length = 186 Score = 122 bits (308), Expect = 4e-27, Method: Composition-based stats. Identities = 41/181 (22%), Positives = 65/181 (35%), Gaps = 10/181 (5%) Query: 4 PQRLFFAIDLPAEIREQIIHWRATHF---PPEAGRPVAADNLHLTLAFLGEVSAEKEKAL 60 R FFA+ LP + + T V +D HLTL+FLG++ + + L Sbjct: 2 KIRAFFALTLPDSVVRWLADHADTLCEYDKKTEVNWVDSDRYHLTLSFLGDIELGQVEDL 61 Query: 61 SLLAGRIRQP--GFTLTLDDAGQWL--RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCF 116 A F + ++ A + + + + L QL ++ A ++G Sbjct: 62 EACARECLADFCSFQVHINAAEYYRVSKKLALIAALPDVHEELQQLHDLTVDVAKKAGVT 121 Query: 117 QSNRPFHPHITLLRDASEAVTIPP---PGFNWSYAVTEFTLYASSFARGRTRYTPLKRWA 173 F PHITL R + P P + L+ S + YTPL Sbjct: 122 YEEEDFKPHITLGRLPGKNGFKSPEKWPDLDMFSLADSVVLFQSKPGEDGSIYTPLFEIP 181 Query: 174 L 174 L Sbjct: 182 L 182 >UniRef50_D2LR69 2'-5' RNA ligase n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LR69_BACS4 Length = 178 Score = 122 bits (308), Expect = 4e-27, Method: Composition-based stats. Identities = 47/183 (25%), Positives = 75/183 (40%), Gaps = 12/183 (6%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATH-FPPEAGRPVAADNLHLTLAFLGEVSAEKEKA 59 M+ F + + ++ + +I + + V+ ++ HLTL FLG EK Sbjct: 1 MNNKHH-FIGVKVSDKVSQVLIGKQEELDVSHYFKKVVSKEDFHLTLLFLG--GWEKTHT 57 Query: 60 L-SLLAGRIRQPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGC 115 L L + Q F+LTL+ G + + RV+W G+ Q L L + A SG Sbjct: 58 LWERLKMTLTQRTFSLTLNSIGYFGKEAEPRVIWGGVAQ-SDALFNLHKNIICLAQESGF 116 Query: 116 FQSNRPFHPHITLLR--DASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWA 173 RPF PHIT+ + AS S+ V L+ R YT + + Sbjct: 117 PLEKRPFKPHITIAKSLKASSFNQSLYLEQEVSWDVDTLHLFE-VNPGKRPMYTSVSKIE 175 Query: 174 LTQ 176 L++ Sbjct: 176 LSR 178 >UniRef50_A2SQE0 2'-5' RNA ligase n=1 Tax=Methanocorpusculum labreanum Z RepID=A2SQE0_METLZ Length = 154 Score = 122 bits (306), Expect = 7e-27, Method: Composition-based stats. Identities = 36/142 (25%), Positives = 54/142 (38%), Gaps = 8/142 (5%) Query: 39 ADNLHLTLAFLGEVSAEKEKALSLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRG 98 AD +H+TL FLGE+ K ++ ++R F L + R RV+ + Sbjct: 15 ADQMHITLKFLGEIPEVKIPKIAGALEKVRGAPFQLQAARVSTFGR-RVIKAEVTDQSCC 73 Query: 99 LIQLANMLRSQAARSGCFQSNRPFHPHITLLRDASEAVTIPPPGFNW------SYAVTEF 152 +A + G + RPF PHITL R A + + + E Sbjct: 74 -ADIAKQIDGLLLPLGFPKEARPFSPHITLARIKEYAPDLQEKTDALCDAEFGTCMIEEI 132 Query: 153 TLYASSFARGRTRYTPLKRWAL 174 L S+ + YT L R L Sbjct: 133 LLKQSTLTPRGSIYTTLARVKL 154 >UniRef50_D1WYH2 2'-5' RNA ligase n=2 Tax=Streptomyces RepID=D1WYH2_9ACTO Length = 209 Score = 121 bits (305), Expect = 7e-27, Method: Composition-based stats. Identities = 45/183 (24%), Positives = 69/183 (37%), Gaps = 13/183 (7%) Query: 2 SEPQRLFFAIDLPAEIREQIIH-WRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL 60 + R+F A+ P + ++++ R + R ++ H+TLAFLGE+ L Sbjct: 19 TTTTRVFLALAPPDDAKDELAQALRPAYGAHPRMRWNRIEDWHITLAFLGELPVAAVPPL 78 Query: 61 SLLAGRI--RQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQS 118 + R+ L L G + RV+W G+ GL LA +R+ G Sbjct: 79 MAPLAGLAARRRPLRLALHGGGHFD-ERVLWTGIAGDLAGLHHLATDVRALVRECGVSFP 137 Query: 119 NRPFHPHITLLRDAS-------EAVTIPPPGFNWSYAVTEFTLYASSFARG-RT-RYTPL 169 RP PH+TL R EA S+ L S+ RG Y + Sbjct: 138 ERPLRPHLTLARSRRGDQAATVEAAAGIAAFSGRSWEARRLHLVGSNVGRGPGPIHYRDI 197 Query: 170 KRW 172 W Sbjct: 198 DAW 200 >UniRef50_B3T5E4 Putative uncharacterized protein n=1 Tax=uncultured marine microorganism HF4000_ANIW141I9 RepID=B3T5E4_9ZZZZ Length = 151 Score = 121 bits (305), Expect = 8e-27, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 51/151 (33%), Gaps = 12/151 (7%) Query: 37 VAADNLHLTLAFLGEVSAEKEKALSLLAGRI--RQPGFTLTLDDAGQWL---RSRVVWLG 91 + +DN+H+TL F+G+ + + I + G + R R++WLG Sbjct: 1 MRSDNIHVTLKFIGDTPEDDVDQIGHTIKDIIGSTQSLKFKISGTGCFPKKERPRILWLG 60 Query: 92 MRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPHITLLRDASEAVTIPPPG-------FN 144 + L L + G + + + PH++L R P Sbjct: 61 INGDLLPLQTLVTKINEALDLLGYPKEEKNYTPHLSLARIKYPQKHTPDISSFLNAEYEP 120 Query: 145 WSYAVTEFTLYASSFARGRTRYTPLKRWALT 175 + + S + YT L + LT Sbjct: 121 IQLQINKIHFMRSELFFKGSVYTILDTYFLT 151 >UniRef50_UPI0001C42779 2''-5'' RNA ligase n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42779 Length = 188 Score = 121 bits (305), Expect = 8e-27, Method: Composition-based stats. Identities = 36/187 (19%), Positives = 70/187 (37%), Gaps = 15/187 (8%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGR-PVAADNLHLTLAFLGEVS----AE 55 M+E F ++ + AEI+E A + ++LH+TL FLG VS E Sbjct: 1 MNEQH-YFLSVPVSAEIKELYSKHLADLKKQYPFKQWPHPEDLHITLVFLGAVSTKKRQE 59 Query: 56 KEKALSLLAGRIRQPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAAR 112 + ++ FTL + + R++W ++ L +L + Sbjct: 60 LIEQINQTLNSSGLSSFTLRIGGLNTFGNERSPRILWADVQGNLEKLHKLQREINGVCQN 119 Query: 113 SGCFQSNRPFHPHITLLRDASEAVTIPPPGFNWS-----YAVTEFTLYASSFARGRTRYT 167 NRP+ PH+T+ + + ++ + + F L + +Y Sbjct: 120 LDLRTDNRPYRPHMTIAKKWVGQMEFLLSDDPFTESFVEWDIPYFQLIEIHP-KQSPKYK 178 Query: 168 PLKRWAL 174 ++R+ L Sbjct: 179 EIQRFNL 185 >UniRef50_C5RP17 2'-5' RNA ligase n=1 Tax=Clostridium cellulovorans 743B RepID=C5RP17_CLOCL Length = 180 Score = 121 bits (305), Expect = 9e-27, Method: Composition-based stats. Identities = 40/180 (22%), Positives = 69/180 (38%), Gaps = 11/180 (6%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPE-AGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 R++ AI + + ++ G +N HLT+ F+GEV + L + Sbjct: 1 MRVYIAIAFEDTVEDYFDKITSSIKEHCTEGSFTRKNNFHLTVRFIGEVDDSQIDRLKEV 60 Query: 64 AGR--IRQPGFTLTLDDAGQWLRS--RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 + ++ F L +++ G + R ++W+G + P L +L L + Sbjct: 61 LDKSVLKITPFELLVNNLGVFKRKNTNILWIGAEESP-ILSELHKELSILLQEYKIAFYD 119 Query: 120 RPFHPHITLLRDA-----SEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 + F PHITL R S+ + V TL AS G+ PL + L Sbjct: 120 KRFMPHITLGRRVVFQENSKDLNDLIQFERIKIPVEAITLMASKEENGKLNGVPLYKVNL 179 >UniRef50_D1B782 2'-5' RNA ligase n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B782_THEAS Length = 192 Score = 121 bits (304), Expect = 1e-26, Method: Composition-based stats. Identities = 41/191 (21%), Positives = 64/191 (33%), Gaps = 26/191 (13%) Query: 5 QRLFFAIDLPAEIREQII-HWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEK----A 59 R F + P +R + + + V + +H+TL FLGEV + + Sbjct: 1 MRCFACLVPPMGVRCLVSSRLEPFRRAFRSVKWVREELMHVTLLFLGEVPRSEAESFGHR 60 Query: 60 LSLLAGRIRQPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGCF 116 L +A P L+L G + R +W+G+ L A + A G Sbjct: 61 LRDVAD--SYPPINLSLGGMGAFPSVRSPRAIWVGLGGELDVLSSFAERVARCAPGGG-- 116 Query: 117 QSNRPFHPHITLLRDASEAVTIPPPGFNWSYAVT------------EFTLYASSFARGRT 164 F PH+T+ R + V+ E L S G Sbjct: 117 --GERFVPHMTVGRVRDGEALGEALDEAGLWEVSFEGDKVCAFSVCEVVLMESHLGPGGP 174 Query: 165 RYTPLKRWALT 175 RY P +R+ L Sbjct: 175 RYVPFRRYPLV 185 >UniRef50_A1KCB4 2'-5' RNA ligase n=2 Tax=Betaproteobacteria RepID=A1KCB4_AZOSB Length = 185 Score = 121 bits (304), Expect = 1e-26, Method: Composition-based stats. Identities = 49/177 (27%), Positives = 66/177 (37%), Gaps = 9/177 (5%) Query: 2 SEPQRLFFAIDLPAEIREQIIHWRATHF-----PPEAGRPVAADNLHLTLAFLGEVSAEK 56 + P RLF A+ A R + R P + PV +D LHLTL F+G V + Sbjct: 11 ARPARLFLALWPDAATRRTLAQARDQWRWEQGSAPRSPAPVRSDKLHLTLHFIGNVDRSR 70 Query: 57 EKALSLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCF 116 AL + F L W R + L P L+ L L G Sbjct: 71 LPALQAGLA-VACSAFELAFGRHALWAR-GIAVLEPLALPPALLALHGALGDALRDLGLP 128 Query: 117 QSNRPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWA 173 RPF PH+TL R A A+ P +++ + L S G Y PL + Sbjct: 129 VEQRPFRPHVTLARHARNALP-PLHTPPFTWRPAGYALVESRLDAGGG-YHPLTHYP 183 >UniRef50_C7HZ61 2'-5' RNA ligase n=1 Tax=Thiomonas intermedia K12 RepID=C7HZ61_THIIN Length = 186 Score = 120 bits (302), Expect = 2e-26, Method: Composition-based stats. Identities = 56/174 (32%), Positives = 73/174 (41%), Gaps = 5/174 (2%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLFFA+ +R I + RP AA LHLT+ F+ V A++ L + Sbjct: 16 LRLFFALWPGQALRRHIAEHQTLWQWAPPARPAAAAKLHLTVLFMDRVPADQVTTLLEVG 75 Query: 65 GRIRQ--PGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 R+ + F LTLD A W + L QPP L+ L L Q + G R F Sbjct: 76 ERVARNWADFALTLDRAAVWHHGGIAHLAPSQPPAELLWLRAALAEQVGQRGLPFDARAF 135 Query: 123 HPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ 176 PH+TL R A A P + V F L S G RY + RW L + Sbjct: 136 APHVTLARRAQ-ATQPPIAFPPLHWTVRGFALVHSVLGTG--RYDVIGRWPLNR 186 >UniRef50_A7I913 2'-5' RNA ligase n=1 Tax=Candidatus Methanoregula boonei 6A8 RepID=A7I913_METB6 Length = 183 Score = 120 bits (302), Expect = 2e-26, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 58/177 (32%), Gaps = 10/177 (5%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGR-PVAADNLHLTLAFLGEVSAEKEKALSLLA 64 R F A ++ E+RE + + T + V +H+T+ FLGEV K + Sbjct: 7 RAFVAFEISEEMRELLRAAQDTFKKSSSRLTFVDPPLIHITVKFLGEVDERKIPLVISAL 66 Query: 65 GRIRQPGFTLTLDDAGQ--WLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 I+ F + VW + +G ++ + S A G + R F Sbjct: 67 NTIKAVPFAAKGSRITVNNFKSPHTVWCAIDDAGKG-REVFGAVESVLAPLGFARETRAF 125 Query: 123 HPHITLLRDASEAVTI------PPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWA 173 PH TL R + S V L S+ Y + A Sbjct: 126 TPHATLARVKVANPALFRCLEEVKTAPCGSCMVAGLKLKKSTLTPNGPVYEDIAEVA 182 >UniRef50_B4V712 2'-5' RNA ligase n=2 Tax=Streptomyces RepID=B4V712_9ACTO Length = 194 Score = 120 bits (302), Expect = 2e-26, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 63/182 (34%), Gaps = 13/182 (7%) Query: 3 EPQRLFFAIDLPAEIREQIIHWRATHFPP-EAGRPVAADNLHLTLAFLGEVSAEKEKALS 61 R+F A+ P + +E++ + R ++ H+TLAFLGE+ L Sbjct: 8 STVRVFIALAPPDDAKEELARALGPAYDAYPRMRWNRIEDWHITLAFLGELPVGAVALLR 67 Query: 62 LLAGRIRQP--GFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 + L + G + RV+W G+ L LA +R G Sbjct: 68 PPLADLAATRRPVHLAMHGGGHFD-ERVLWSGIEGDLEDLHLLATDVRRVVRECGVEFEE 126 Query: 120 RPFHPHITLLRDAS-------EAVTIPPPGFNWSYAVTEFTLYASSFARG-RT-RYTPLK 170 RP PH+TL R EA + L S+ RG Y ++ Sbjct: 127 RPLRPHLTLARSRRDDPTSVTEAAAGLAGFTGRRWEARRLHLVGSNTGRGPGPIHYRDIE 186 Query: 171 RW 172 W Sbjct: 187 AW 188 >UniRef50_A9ILF3 ABC transporter (Permease) n=4 Tax=Bartonella RepID=A9ILF3_BART1 Length = 179 Score = 120 bits (302), Expect = 2e-26, Method: Composition-based stats. Identities = 39/181 (21%), Positives = 67/181 (37%), Gaps = 14/181 (7%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF A+ +P + +Q++ + + + N H+TL+F GEV + L Sbjct: 3 RLFSALQIPQQTTQQLVSLQTAL---PNAQWINPQNFHVTLSFFGEVESSTADVLMHAFD 59 Query: 66 RIRQPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 I+ P F L + + + + + +P L L ++ + R F Sbjct: 60 TIKLPPFMLQMKGFDIFGSENAPHSLVIRI-EPCETLNLLHEKMQRIRSHLRLAPDEREF 118 Query: 123 HPHITLLRDASEAVTIPPPGFNW-------SYAVTEFTLYASSFARGRTRYTPLKRWALT 175 PHIT+ R PP ++ + V F L+ S T Y W L Sbjct: 119 TPHITVARLLDIKSEDLPPYLSYRGDFSFPPFEVDHFFLFLSPSPSSDTPYIVKGCWPLQ 178 Query: 176 Q 176 + Sbjct: 179 R 179 >UniRef50_Q1BHE5 2',5' RNA ligase n=12 Tax=Burkholderiaceae RepID=Q1BHE5_BURCA Length = 207 Score = 119 bits (300), Expect = 3e-26, Method: Composition-based stats. Identities = 49/176 (27%), Positives = 67/176 (38%), Gaps = 11/176 (6%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGE---VSAEKEKALS 61 R FFA+ +P I A E PV A+ LH+TL LG+ V Sbjct: 30 HRFFFAV-MPDTATAARIAGVAKSLQQEKDSPVDAERLHITLGSLGDFAYVPGATLARAR 88 Query: 62 LLAGRIRQPGFTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQS 118 +A R+ P F++ D + R + + L + LI LR R G Sbjct: 89 AVADRMEVPSFSVRFDKIISFNRRSGRQPLVLTGKAGLEDLIDFRRQLRDALKRVGVPVF 148 Query: 119 NRPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 F PH+TLL A W+ V +F L S G++ Y L RW L Sbjct: 149 PSSFTPHVTLLYGAQRPDEYRIEPITWT--VFDFVLIDSWL--GKSHYDVLGRWPL 200 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P37025 2'-5'-RNA ligase n=156 Tax=Enterobacteriaceae Re... 190 2e-47 UniRef50_B5YJG0 2'-5' RNA ligase n=1 Tax=Thermodesulfovibrio yel... 176 2e-43 UniRef50_B5YF63 2'-5' RNA ligase n=2 Tax=Dictyoglomus RepID=B5YF... 174 1e-42 UniRef50_D1CCP6 2'-5' RNA ligase n=1 Tax=Thermobaculum terrenum ... 173 3e-42 UniRef50_A4BU36 2'-5' RNA ligase, putative n=1 Tax=Nitrococcus m... 172 6e-42 UniRef50_O28125 UPF0097 protein AF_2157 n=1 Tax=Archaeoglobus fu... 170 2e-41 UniRef50_C8SB57 2'-5' RNA ligase n=1 Tax=Ferroglobus placidus DS... 170 2e-41 UniRef50_Q60BS9 Putative 2'-5' RNA ligase n=1 Tax=Methylococcus ... 168 9e-41 UniRef50_Q3JCL1 2',5' RNA ligase n=2 Tax=Nitrosococcus oceani Re... 167 1e-40 UniRef50_Q39PT9 2',5' RNA ligase n=4 Tax=Geobacter RepID=Q39PT9_... 165 5e-40 UniRef50_A8U4H0 2'-5' RNA ligase n=1 Tax=alpha proteobacterium B... 165 6e-40 UniRef50_A3DNW5 2'-5' RNA ligase n=1 Tax=Staphylothermus marinus... 164 9e-40 UniRef50_Q1QSH4 2',5' RNA ligase n=1 Tax=Chromohalobacter salexi... 164 9e-40 UniRef50_A5D3U3 2'-5' RNA ligase n=1 Tax=Pelotomaculum thermopro... 164 9e-40 UniRef50_O57823 UPF0097 protein PH0099 n=10 Tax=Euryarchaeota Re... 163 2e-39 UniRef50_B6IVY2 2'-5' RNA ligase, putative n=1 Tax=Rhodospirillu... 162 4e-39 UniRef50_Q9X2H4 UPF0097 protein TM_1860 n=9 Tax=Thermotogaceae R... 162 6e-39 UniRef50_Q64CX2 TRNA nucleotidyltransferase n=2 Tax=environmenta... 161 1e-38 UniRef50_Q1IPR0 2',5' RNA ligase n=1 Tax=Candidatus Koribacter v... 161 1e-38 UniRef50_Q58963 UPF0097 protein MJ1568 n=11 Tax=Methanococcales ... 161 1e-38 UniRef50_D1C514 2'-5' RNA ligase n=1 Tax=Sphaerobacter thermophi... 160 2e-38 UniRef50_C0GSW7 2'-5' RNA ligase n=1 Tax=Desulfonatronospira thi... 160 2e-38 UniRef50_A1AS05 2'-5' RNA ligase n=1 Tax=Pelobacter propionicus ... 160 2e-38 UniRef50_A6EV98 2',5' RNA ligase n=1 Tax=Marinobacter algicola D... 160 2e-38 UniRef50_B8FL01 2'-5' RNA ligase n=1 Tax=Desulfatibacillum alken... 160 2e-38 UniRef50_B5E8F5 2'-5' RNA ligase n=3 Tax=Geobacter RepID=B5E8F5_... 160 2e-38 UniRef50_Q2Y753 2',5' RNA ligase n=1 Tax=Nitrosospira multiformi... 160 2e-38 UniRef50_Q5NYK1 2'-5' RNA ligase n=1 Tax=Aromatoleum aromaticum ... 159 3e-38 UniRef50_A1RX48 2'-5' RNA ligase n=1 Tax=Thermofilum pendens Hrk... 159 3e-38 UniRef50_B5JNL9 2'-5' RNA ligase n=1 Tax=Verrucomicrobiae bacter... 159 5e-38 UniRef50_A8MDT9 2'-5' RNA ligase n=1 Tax=Caldivirga maquilingens... 158 8e-38 UniRef50_C4ZJW1 2'-5' RNA ligase n=1 Tax=Thauera sp. MZ1T RepID=... 158 9e-38 UniRef50_Q2LPL4 2'-5' RNA ligase n=1 Tax=Syntrophus aciditrophic... 158 1e-37 UniRef50_Q2BMM5 2',5' RNA ligase n=1 Tax=Neptuniibacter caesarie... 156 3e-37 UniRef50_Q3Z6J0 2'-5' RNA ligase family protein n=5 Tax=Dehaloco... 156 3e-37 UniRef50_Q3SK36 2',5' RNA ligase n=1 Tax=Thiobacillus denitrific... 156 3e-37 UniRef50_B8CXC1 2'-5' RNA ligase n=1 Tax=Halothermothrix orenii ... 156 3e-37 UniRef50_B8D3G7 2'-5' RNA ligase n=1 Tax=Desulfurococcus kamchat... 156 4e-37 UniRef50_Q72W43 2'-5' RNA ligase n=2 Tax=Leptospira interrogans ... 156 4e-37 UniRef50_Q1PYI6 Similar to 2'-5' RNA ligase n=1 Tax=Candidatus K... 156 4e-37 UniRef50_Q0AGI2 2'-5' RNA ligase n=2 Tax=Nitrosomonas RepID=Q0AG... 155 7e-37 UniRef50_Q1NWG3 2',5' RNA ligase n=4 Tax=Deltaproteobacteria Rep... 154 8e-37 UniRef50_B1ZYS3 2'-5' RNA ligase n=1 Tax=Opitutus terrae PB90-1 ... 154 9e-37 UniRef50_B1I1T7 2'-5' RNA ligase n=1 Tax=Candidatus Desulforudis... 154 9e-37 UniRef50_Q2VZ42 2'-5' RNA ligase n=2 Tax=Magnetospirillum RepID=... 154 1e-36 UniRef50_B3EA65 2'-5' RNA ligase n=1 Tax=Geobacter lovleyi SZ Re... 154 1e-36 UniRef50_Q8TVM2 2'-5' RNA ligase n=1 Tax=Methanopyrus kandleri R... 154 1e-36 UniRef50_A0B6Z0 2'-5' RNA ligase n=1 Tax=Methanosaeta thermophil... 154 1e-36 UniRef50_Q0BV79 2'-5' RNA ligase n=2 Tax=Acetobacteraceae RepID=... 154 1e-36 UniRef50_C7R810 2'-5' RNA ligase n=1 Tax=Kangiella koreensis DSM... 154 1e-36 UniRef50_Q47EL0 2',5' RNA ligase n=1 Tax=Dechloromonas aromatica... 154 2e-36 UniRef50_B8FSV2 2'-5' RNA ligase n=2 Tax=Desulfitobacterium hafn... 153 2e-36 UniRef50_C8X1G4 2'-5' RNA ligase n=1 Tax=Desulfohalobium retbaen... 153 2e-36 UniRef50_Q11D05 2'-5' RNA ligase n=26 Tax=Rhizobiales RepID=Q11D... 153 3e-36 UniRef50_A9A3X7 2'-5' RNA ligase n=1 Tax=Nitrosopumilus maritimu... 153 4e-36 UniRef50_A1HSF5 2'-5' RNA ligase n=1 Tax=Thermosinus carboxydivo... 153 4e-36 UniRef50_A1S9X0 Putative 2'-5' RNA ligase n=1 Tax=Shewanella ama... 152 4e-36 UniRef50_A0LLA5 2'-5' RNA ligase n=1 Tax=Syntrophobacter fumarox... 152 4e-36 UniRef50_B8GQV2 2'-5' RNA ligase n=1 Tax=Thioalkalivibrio sp. HL... 152 5e-36 UniRef50_A1U2M3 2'-5' RNA ligase n=1 Tax=Marinobacter aquaeolei ... 152 5e-36 UniRef50_Q0AKK0 2'-5' RNA ligase n=1 Tax=Maricaulis maris MCS10 ... 152 5e-36 UniRef50_C6BS46 2'-5' RNA ligase n=1 Tax=Desulfovibrio salexigen... 152 5e-36 UniRef50_A8ZY65 2'-5' RNA ligase n=1 Tax=Desulfococcus oleovoran... 152 6e-36 UniRef50_C9R942 2'-5' RNA ligase n=1 Tax=Ammonifex degensii KC4 ... 151 7e-36 UniRef50_Q12W73 2'-5' RNA ligase n=4 Tax=Methanosarcinaceae RepI... 151 7e-36 UniRef50_C6P1X6 2'-5' RNA ligase n=1 Tax=Sideroxydans lithotroph... 151 8e-36 UniRef50_A9WCY3 2'-5' RNA ligase n=3 Tax=Chloroflexus RepID=A9WC... 151 1e-35 UniRef50_O66967 UPF0097 protein aq_768 n=2 Tax=Aquificaceae RepI... 151 1e-35 UniRef50_A8UTL9 Putative uncharacterized protein n=1 Tax=Hydroge... 151 1e-35 UniRef50_A3DCR1 2'-5' RNA ligase n=3 Tax=Clostridium thermocellu... 151 1e-35 UniRef50_Q74MW1 NEQ502 n=1 Tax=Nanoarchaeum equitans RepID=Q74MW... 150 2e-35 UniRef50_D2MH67 2'-5' RNA ligase n=1 Tax=Candidatus Poribacteria... 150 2e-35 UniRef50_B9JCJ4 2'-5' RNA ligase n=44 Tax=Rhizobiales RepID=B9JC... 150 2e-35 UniRef50_Q2FTJ3 2',5' RNA ligase n=1 Tax=Methanospirillum hungat... 149 3e-35 UniRef50_C4L922 2'-5' RNA ligase n=1 Tax=Tolumonas auensis DSM 9... 149 3e-35 UniRef50_D2LH53 2'-5' RNA ligase n=1 Tax=Rhodomicrobium vannieli... 149 4e-35 UniRef50_Q15YM1 2'-5' RNA ligase n=1 Tax=Pseudoalteromonas atlan... 149 5e-35 UniRef50_A5V4K1 2'-5' RNA ligase n=1 Tax=Sphingomonas wittichii ... 149 5e-35 UniRef50_C6J532 2'-5' RNA ligase n=1 Tax=Paenibacillus sp. oral ... 148 6e-35 UniRef50_B3T3P3 Putative 2',5' RNA ligase family protein n=2 Tax... 148 7e-35 UniRef50_Q3AEX2 Putative 2'-5' RNA ligase n=1 Tax=Carboxydotherm... 148 7e-35 UniRef50_Q0W551 2'-5' RNA ligase n=1 Tax=uncultured methanogenic... 148 8e-35 UniRef50_UPI000178815C 2''''-5'''' RNA ligase n=1 Tax=Geobacillu... 148 9e-35 UniRef50_D1YUN2 2'-5' RNA ligase n=1 Tax=Methanocella paludicola... 148 9e-35 UniRef50_A7HSX7 2'-5' RNA ligase n=1 Tax=Parvibaculum lavamentiv... 147 1e-34 UniRef50_C8W3K6 2'-5' RNA ligase n=1 Tax=Desulfotomaculum acetox... 147 1e-34 UniRef50_A1RS17 2'-5' RNA ligase n=5 Tax=Thermoproteaceae RepID=... 147 1e-34 UniRef50_B0K2A3 2'-5' RNA ligase n=9 Tax=Thermoanaerobacter RepI... 147 1e-34 UniRef50_A3K2S8 2',5' RNA ligase n=1 Tax=Sagittula stellata E-37... 147 1e-34 UniRef50_A3QHP4 2'-5' RNA ligase n=1 Tax=Shewanella loihica PV-4... 147 1e-34 UniRef50_Q2RN52 2',5' RNA ligase n=1 Tax=Rhodospirillum rubrum A... 147 2e-34 UniRef50_B1L7J5 2'-5' RNA ligase n=1 Tax=Candidatus Korarchaeum ... 147 2e-34 UniRef50_O26683 UPF0097 protein MTH_583 n=1 Tax=Methanothermobac... 147 2e-34 UniRef50_A7GTX3 2'-5' RNA ligase n=73 Tax=Bacillus cereus group ... 147 2e-34 UniRef50_Q1GUY9 2',5' RNA ligase n=2 Tax=Sphingomonadales RepID=... 147 2e-34 UniRef50_C7LNR7 2'-5' RNA ligase n=1 Tax=Desulfomicrobium bacula... 146 2e-34 UniRef50_C6QFN4 2'-5' RNA ligase n=1 Tax=Hyphomicrobium denitrif... 146 3e-34 UniRef50_B9KQ60 2'-5' RNA ligase n=4 Tax=Rhodobacter sphaeroides... 146 3e-34 UniRef50_B8I3E4 2'-5' RNA ligase n=1 Tax=Clostridium cellulolyti... 146 4e-34 UniRef50_D1ZYF9 Whole genome shotgun sequence assembly, contig_3... 146 4e-34 UniRef50_C6MFU4 2'-5' RNA ligase n=1 Tax=Nitrosomonas sp. AL212 ... 146 4e-34 UniRef50_B8GHT8 2'-5' RNA ligase n=1 Tax=Methanosphaerula palust... 146 5e-34 UniRef50_A0KP01 2'-5' RNA ligase n=2 Tax=Aeromonas RepID=A0KP01_... 145 5e-34 UniRef50_A4YHN8 2'-5' RNA ligase n=1 Tax=Metallosphaera sedula D... 145 6e-34 UniRef50_B9L2B1 2'-5' RNA ligase n=1 Tax=Thermomicrobium roseum ... 145 6e-34 UniRef50_Q0BX97 2'-5' RNA ligase n=1 Tax=Hyphomonas neptunium AT... 145 6e-34 UniRef50_B6JCZ3 2'-5' RNA ligase n=13 Tax=Alphaproteobacteria Re... 145 7e-34 UniRef50_UPI00016C441C 2''''-5'''' RNA ligase n=1 Tax=Gemmata ob... 144 9e-34 UniRef50_C3NHZ6 2'-5' RNA ligase n=11 Tax=Sulfolobus RepID=C3NHZ... 144 9e-34 UniRef50_Q2Z065 Putative 2'-5' RNA ligase n=1 Tax=uncultured gam... 144 1e-33 UniRef50_Q0Q0I5 LigT n=1 Tax=Heliophilum fasciatum RepID=Q0Q0I5_... 144 1e-33 UniRef50_Q5SHB1 2'-5' RNA ligase n=7 Tax=Thermaceae RepID=Q5SHB1... 144 1e-33 UniRef50_D0CTG2 2'-5' RNA ligase n=1 Tax=Silicibacter lacuscaeru... 144 1e-33 UniRef50_B5IAZ8 2'-5' RNA ligase n=2 Tax=Aciduliprofundum boonei... 144 1e-33 UniRef50_B5HLE7 2',5' RNA ligase n=6 Tax=Streptomyces RepID=B5HL... 144 1e-33 UniRef50_B0T6B2 2'-5' RNA ligase n=5 Tax=Caulobacteraceae RepID=... 144 1e-33 UniRef50_Q67NU4 Putative uncharacterized protein n=1 Tax=Symbiob... 144 1e-33 UniRef50_A8F8W1 2'-5' RNA ligase n=1 Tax=Thermotoga lettingae TM... 144 1e-33 UniRef50_A3CSA5 2'-5' RNA ligase n=1 Tax=Methanoculleus marisnig... 144 1e-33 UniRef50_B9LUM8 2'-5' RNA ligase n=7 Tax=Halobacteriaceae RepID=... 144 1e-33 UniRef50_UPI0001C41DA7 2''-5'' RNA ligase LigT n=1 Tax=Methanobr... 144 1e-33 UniRef50_A9FR36 Putative uncharacterized protein n=1 Tax=Sorangi... 144 2e-33 UniRef50_A4EPW8 2'-5' RNA ligase n=1 Tax=Roseobacter sp. SK209-2... 144 2e-33 UniRef50_Q1IWF3 2',5' RNA ligase n=2 Tax=Deinococcus RepID=Q1IWF... 143 2e-33 UniRef50_Q47TD6 2',5' RNA ligase n=1 Tax=Thermobifida fusca YX R... 143 2e-33 UniRef50_C0ZGV0 Putative uncharacterized protein n=1 Tax=Breviba... 143 2e-33 UniRef50_C7IIN7 2'-5' RNA ligase n=1 Tax=Clostridium papyrosolve... 143 2e-33 UniRef50_C3XAD7 2',5' RNA ligase n=1 Tax=Oxalobacter formigenes ... 143 3e-33 UniRef50_B9ZLA9 2'-5' RNA ligase n=1 Tax=Thioalkalivibrio sp. K9... 143 3e-33 UniRef50_A3UI27 Putative uncharacterized protein n=1 Tax=Oceanic... 142 3e-33 UniRef50_A3VLU9 2'-5' RNA ligase n=1 Tax=Rhodobacterales bacteri... 142 3e-33 UniRef50_Q8EP21 ABC transporter permease n=1 Tax=Oceanobacillus ... 142 3e-33 UniRef50_A8FGD3 2'-5' RNA ligase n=2 Tax=Bacillus pumilus RepID=... 142 4e-33 UniRef50_D2R085 2'-5' RNA ligase n=1 Tax=Pirellula staleyi DSM 6... 142 4e-33 UniRef50_C1DGI0 2-5 RNA ligase protein n=1 Tax=Azotobacter vinel... 142 4e-33 UniRef50_Q1ARL5 2',5' RNA ligase n=1 Tax=Rubrobacter xylanophilu... 142 4e-33 UniRef50_B4D614 2'-5' RNA ligase n=1 Tax=Chthoniobacter flavus E... 142 4e-33 UniRef50_B4S0B5 2,5 RNA ligase n=2 Tax=Alteromonas macleodii Rep... 142 4e-33 UniRef50_B8GVT8 2'-5' RNA ligase n=2 Tax=Caulobacter vibrioides ... 142 5e-33 UniRef50_A1SVM8 2'-5' RNA ligase n=1 Tax=Psychromonas ingrahamii... 142 5e-33 UniRef50_Q2S292 2'-5' RNA ligase n=1 Tax=Salinibacter ruber DSM ... 142 5e-33 UniRef50_Q46QC5 2',5' RNA ligase n=4 Tax=Cupriavidus RepID=Q46QC... 142 6e-33 UniRef50_Q3A1W4 2'-5' RNA ligase n=1 Tax=Pelobacter carbinolicus... 141 7e-33 UniRef50_B2A6J9 2'-5' RNA ligase n=1 Tax=Natranaerobius thermoph... 141 7e-33 UniRef50_A6FTX1 2'-5' RNA ligase n=1 Tax=Roseobacter sp. AzwK-3b... 141 8e-33 UniRef50_C6XKV8 2'-5' RNA ligase n=1 Tax=Hirschia baltica ATCC 4... 141 8e-33 UniRef50_D0MJ05 2'-5' RNA ligase n=1 Tax=Rhodothermus marinus DS... 141 1e-32 UniRef50_C4XNB5 2'-5' RNA ligase n=1 Tax=Desulfovibrio magneticu... 141 1e-32 UniRef50_A9B5P6 2'-5' RNA ligase n=1 Tax=Herpetosiphon aurantiac... 140 2e-32 UniRef50_A7NPU2 2'-5' RNA ligase n=2 Tax=Roseiflexus RepID=A7NPU... 139 5e-32 UniRef50_C3X1K9 2'-5' RNA ligase n=1 Tax=Oxalobacter formigenes ... 139 5e-32 UniRef50_C5V3P4 2'-5' RNA ligase n=1 Tax=Gallionella ferruginea ... 139 5e-32 UniRef50_C1F3J7 2'-5' RNA ligase n=1 Tax=Acidobacterium capsulat... 139 5e-32 UniRef50_B9Z7M0 2'-5' RNA ligase n=1 Tax=Lutiella nitroferrum 20... 138 6e-32 UniRef50_A4XK57 2'-5' RNA ligase n=2 Tax=Clostridia RepID=A4XK57... 138 6e-32 UniRef50_Q28V17 2'5' RNA ligase n=1 Tax=Jannaschia sp. CCS1 RepI... 138 8e-32 UniRef50_Q0ABC1 2'-5' RNA ligase n=1 Tax=Alkalilimnicola ehrlich... 138 9e-32 UniRef50_A4TU26 2',5' RNA ligase n=1 Tax=Magnetospirillum gryphi... 137 1e-31 UniRef50_A3XCV9 2'-5' RNA ligase n=2 Tax=Rhodobacterales RepID=A... 137 1e-31 UniRef50_Q7UM43 Putative uncharacterized protein n=1 Tax=Rhodopi... 137 2e-31 UniRef50_Q0AXI9 Putative integral membrane transport protein n=1... 137 2e-31 UniRef50_C0EIB1 Putative uncharacterized protein n=1 Tax=Clostri... 137 2e-31 UniRef50_A6FXB0 2',5' RNA ligase n=1 Tax=Plesiocystis pacifica S... 137 2e-31 UniRef50_Q5UY33 2'-5' RNA ligase n=1 Tax=Haloarcula marismortui ... 137 2e-31 UniRef50_A5UJ81 2'-5' RNA ligase, LigT n=3 Tax=Methanobrevibacte... 136 2e-31 UniRef50_C1YG14 2'-5' RNA ligase n=1 Tax=Nocardiopsis dassonvill... 136 3e-31 UniRef50_Q02P23 2'-5' RNA ligase n=7 Tax=Pseudomonas RepID=Q02P2... 136 3e-31 UniRef50_Q9K7T9 ABC transporter (Permease) n=1 Tax=Bacillus halo... 136 4e-31 UniRef50_B9XIZ0 2'-5' RNA ligase n=1 Tax=bacterium Ellin514 RepI... 135 6e-31 UniRef50_A0LR27 2'-5' RNA ligase n=1 Tax=Acidothermus cellulolyt... 135 6e-31 UniRef50_B0VJL2 Putative uncharacterized protein n=1 Tax=Candida... 135 6e-31 UniRef50_B8CTB7 2'-5' RNA ligase, putative n=1 Tax=Shewanella pi... 135 6e-31 UniRef50_A6AKQ4 2'-5' RNA ligase n=3 Tax=Vibrio harveyi RepID=A6... 135 6e-31 UniRef50_Q2RJJ7 2',5' RNA ligase n=1 Tax=Moorella thermoacetica ... 135 6e-31 UniRef50_B5Y8R2 2'-5' RNA ligase n=1 Tax=Coprothermobacter prote... 135 7e-31 UniRef50_Q88K67 2'-5' RNA ligase, putative n=6 Tax=Pseudomonas R... 134 8e-31 UniRef50_C1CXY4 Putative 2`-5` RNA ligase n=1 Tax=Deinococcus de... 134 9e-31 UniRef50_C0N774 2'-5' RNA ligase n=1 Tax=Methylophaga thiooxidan... 134 1e-30 UniRef50_A7GH44 2'-5' RNA ligase n=10 Tax=Clostridium RepID=A7GH... 134 1e-30 UniRef50_Q2CG27 2'-5' RNA ligase (Fragment) n=1 Tax=Oceanicola g... 134 1e-30 UniRef50_B4X1Z9 2'-5' RNA ligase n=2 Tax=Alcanivorax RepID=B4X1Z... 134 1e-30 UniRef50_A3ZLX4 2'-5' RNA ligase n=1 Tax=Blastopirellula marina ... 134 2e-30 UniRef50_A6CQH7 Putative uncharacterized protein n=1 Tax=Bacillu... 134 2e-30 UniRef50_C9PFM9 Putative uncharacterized protein n=1 Tax=Vibrio ... 133 2e-30 UniRef50_D2B7J8 2'-5' RNA ligase n=1 Tax=Streptosporangium roseu... 133 2e-30 UniRef50_C3BR82 2'-5' RNA ligase n=3 Tax=Bacillus RepID=C3BR82_9... 133 2e-30 UniRef50_D2S8G3 2'-5' RNA ligase n=1 Tax=Geodermatophilus obscur... 133 3e-30 UniRef50_A0NZS8 2'-5' RNA ligase n=2 Tax=Labrenzia RepID=A0NZS8_... 132 3e-30 UniRef50_D1Y2L4 2'-5' RNA ligase n=1 Tax=Pyramidobacter piscolen... 132 3e-30 UniRef50_C4DT00 2'-5' RNA ligase n=1 Tax=Stackebrandtia nassauen... 132 3e-30 UniRef50_UPI0001C42779 2''-5'' RNA ligase n=1 Tax=Bacillus pseud... 132 3e-30 UniRef50_A4XVF3 2'-5' RNA ligase n=1 Tax=Pseudomonas mendocina y... 132 4e-30 UniRef50_Q45633 UPF0097 protein in malA 3'region n=9 Tax=Bacteri... 132 4e-30 UniRef50_Q02C89 2'-5' RNA ligase n=1 Tax=Candidatus Solibacter u... 132 6e-30 UniRef50_A7H7I0 2'-5' RNA ligase n=4 Tax=Anaeromyxobacter RepID=... 132 6e-30 UniRef50_A0RYQ5 2'-5' RNA ligase n=1 Tax=Cenarchaeum symbiosum R... 131 8e-30 UniRef50_Q2NI02 Predicted 2'-5' RNA ligase n=1 Tax=Methanosphaer... 131 8e-30 UniRef50_B0TTJ1 2'-5' RNA ligase n=2 Tax=Shewanella RepID=B0TTJ1... 131 9e-30 UniRef50_C5CES3 2'-5' RNA ligase n=1 Tax=Kosmotoga olearia TBF 1... 131 1e-29 UniRef50_O34570 UPF0097 protein ytlP n=2 Tax=Bacillus subtilis g... 131 1e-29 UniRef50_A8PKT4 2'-5' RNA ligase n=1 Tax=Rickettsiella grylli Re... 131 2e-29 UniRef50_Q9HM49 Putative uncharacterized protein Ta0020 n=2 Tax=... 130 2e-29 UniRef50_Q1CXV0 2'-5' RNA ligase n=1 Tax=Myxococcus xanthus DK 1... 130 2e-29 UniRef50_D1B782 2'-5' RNA ligase n=1 Tax=Thermanaerovibrio acida... 130 2e-29 UniRef50_B6J032 2'-5' RNA ligase n=6 Tax=Coxiella burnetii RepID... 130 2e-29 UniRef50_D0LIM3 2'-5' RNA ligase n=1 Tax=Haliangium ochraceum DS... 130 3e-29 UniRef50_C1P948 2'-5' RNA ligase n=1 Tax=Bacillus coagulans 36D1... 129 3e-29 UniRef50_C9N809 2'-5' RNA ligase n=2 Tax=Streptomyces RepID=C9N8... 129 5e-29 UniRef50_A6TLD2 2'-5' RNA ligase n=1 Tax=Alkaliphilus metallired... 129 5e-29 UniRef50_A9IDL0 Putative 2'-5' RNA ligase n=3 Tax=Bordetella Rep... 129 6e-29 UniRef50_A9HK09 2'-5' RNA ligase n=1 Tax=Gluconacetobacter diazo... 128 6e-29 UniRef50_Q65G06 2'_5' RNA ligase YtlP n=1 Tax=Bacillus lichenifo... 128 8e-29 UniRef50_A9BEV1 2'-5' RNA ligase n=1 Tax=Petrotoga mobilis SJ95 ... 128 1e-28 UniRef50_C6CZ97 2'-5' RNA ligase n=1 Tax=Paenibacillus sp. JDR-2... 127 1e-28 UniRef50_Q6MIS1 Putative 2'-5' RNA ligase n=1 Tax=Bdellovibrio b... 127 1e-28 UniRef50_A1SDD3 2'-5' RNA ligase n=2 Tax=Nocardioidaceae RepID=A... 127 2e-28 UniRef50_B7GK61 2'-5' RNA ligase n=1 Tax=Anoxybacillus flavither... 127 2e-28 UniRef50_Q6AKT9 Putative uncharacterized protein n=1 Tax=Desulfo... 127 2e-28 UniRef50_Q5FPP9 2'-5' RNA ligase n=1 Tax=Gluconobacter oxydans R... 127 2e-28 UniRef50_Q5WE85 Putative uncharacterized protein n=1 Tax=Bacillu... 126 2e-28 UniRef50_C7DIP0 2'-5' RNA ligase n=1 Tax=Candidatus Micrarchaeum... 126 3e-28 UniRef50_Q21UK0 2',5' RNA ligase n=1 Tax=Rhodoferax ferrireducen... 126 4e-28 UniRef50_D2L3I4 2'-5' RNA ligase n=1 Tax=Desulfovibrio sp. FW101... 126 5e-28 UniRef50_UPI00016981C7 2'''',5'''' RNA ligase n=1 Tax=Endoriftia... 126 5e-28 UniRef50_D1WYH2 2'-5' RNA ligase n=2 Tax=Streptomyces RepID=D1WY... 125 5e-28 UniRef50_A3TFV9 Putative uncharacterized protein n=1 Tax=Janibac... 125 5e-28 UniRef50_C7Q269 2'-5' RNA ligase n=1 Tax=Catenulispora acidiphil... 125 5e-28 UniRef50_A9KM39 2'-5' RNA ligase n=1 Tax=Clostridium phytofermen... 125 6e-28 UniRef50_A7VYB6 Putative uncharacterized protein n=1 Tax=Clostri... 125 7e-28 UniRef50_A9ILF3 ABC transporter (Permease) n=4 Tax=Bartonella Re... 125 7e-28 UniRef50_D2LR69 2'-5' RNA ligase n=1 Tax=Bacillus cellulosilytic... 125 7e-28 UniRef50_B3T5E4 Putative uncharacterized protein n=1 Tax=uncultu... 124 1e-27 UniRef50_B5H0L7 2',5' RNA ligase n=2 Tax=Streptomyces RepID=B5H0... 124 1e-27 UniRef50_B4V712 2'-5' RNA ligase n=2 Tax=Streptomyces RepID=B4V7... 124 1e-27 UniRef50_Q7P1N0 2'-5' RNA ligase n=1 Tax=Chromobacterium violace... 124 1e-27 UniRef50_C6PE45 2'-5' RNA ligase n=1 Tax=Thermoanaerobacterium t... 124 1e-27 UniRef50_C8WVE5 2'-5' RNA ligase n=2 Tax=Alicyclobacillus acidoc... 124 1e-27 UniRef50_A7I913 2'-5' RNA ligase n=1 Tax=Candidatus Methanoregul... 124 2e-27 UniRef50_A8G077 2'-5' RNA ligase n=1 Tax=Shewanella sediminis HA... 124 2e-27 UniRef50_Q0F3T5 2`-5` RNA ligase, putative n=1 Tax=Mariprofundus... 123 2e-27 UniRef50_A2SQE0 2'-5' RNA ligase n=1 Tax=Methanocorpusculum labr... 123 3e-27 UniRef50_D1A6E1 2'-5' RNA ligase n=1 Tax=Thermomonospora curvata... 123 3e-27 UniRef50_C8WMV6 2'-5' RNA ligase n=2 Tax=Coriobacteriaceae RepID... 123 3e-27 UniRef50_C5RP17 2'-5' RNA ligase n=1 Tax=Clostridium cellulovora... 123 3e-27 UniRef50_C1TRT5 2'-5' RNA ligase n=1 Tax=Dethiosulfovibrio pepti... 122 4e-27 UniRef50_UPI000196B731 hypothetical protein CATMIT_00742 n=1 Tax... 122 5e-27 UniRef50_Q2BKJ4 Putative uncharacterized protein n=1 Tax=Neptuni... 121 9e-27 UniRef50_C7HZ61 2'-5' RNA ligase n=1 Tax=Thiomonas intermedia K1... 120 2e-26 UniRef50_Q12C65 2',5' RNA ligase n=1 Tax=Polaromonas sp. JS666 R... 120 2e-26 UniRef50_Q2B4M3 Putative uncharacterized protein n=1 Tax=Bacillu... 119 3e-26 Sequences not found previously or not previously below threshold: >UniRef50_P37025 2'-5'-RNA ligase n=156 Tax=Enterobacteriaceae RepID=LIGT_ECOLI Length = 176 Score = 190 bits (483), Expect = 2e-47, Method: Composition-based stats. Identities = 176/176 (100%), Positives = 176/176 (100%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL 60 MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL Sbjct: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL 60 Query: 61 SLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 SLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR Sbjct: 61 SLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 Query: 121 PFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ 176 PFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ Sbjct: 121 PFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ 176 >UniRef50_B5YJG0 2'-5' RNA ligase n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YJG0_THEYD Length = 186 Score = 176 bits (448), Expect = 2e-43, Method: Composition-based stats. Identities = 45/187 (24%), Positives = 76/187 (40%), Gaps = 16/187 (8%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF AI++P EI+E + + V N H+TL FLGEV+ ++ Sbjct: 1 MRLFIAIEIPDEIKEFLYQLIYLKTSLDGVSIVQKGNFHITLKFLGEVNEGLIPDITNTL 60 Query: 65 GRIR--QPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 +I FTL + G + + RV+W+G + L ++A + + G + + Sbjct: 61 RKISNGFSPFTLKITHPGVFPDKFKPRVIWIG-TENTDSLKEMAKRIDEEMESLGFKRED 119 Query: 120 RPFHPHITLLRDASEA----------VTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPL 169 + F HIT+ R + + V EF L S+ + Y L Sbjct: 120 KNFKSHITVARVKNFHNGKYLFEKILKKFSGESSQLKFQVEEFVLMKSTLTPKGSIYDVL 179 Query: 170 KRWALTQ 176 +R+ L + Sbjct: 180 QRFPLVK 186 >UniRef50_B5YF63 2'-5' RNA ligase n=2 Tax=Dictyoglomus RepID=B5YF63_DICT6 Length = 194 Score = 174 bits (441), Expect = 1e-42, Method: Composition-based stats. Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 9/181 (4%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPP--EAGRPVAADNLHLTLAFLGEVSAEKEKALSL 62 +RLF AI+L I++ I+ ++ + V +N HLT+ FLGE + Sbjct: 13 RRLFIAIELEDSIKDHILSFQKELKNSVLGDVKWVERENFHLTIKFLGETPENLIDDIKS 72 Query: 63 LAGRIR--QPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQ 117 + F ++L+ G + RV+W+G+ + GL ++ + + + + G + Sbjct: 73 ILDETSYYFEPFYISLEGFGAFPSLKSPRVLWIGIEEGLDGLEKVFDFIEKRLVKKGFRK 132 Query: 118 SNRPFHPHITLLRDASEAVT--IPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALT 175 +RPF PH+TL R V V+ TL+ S YTP+ R L Sbjct: 133 EDRPFSPHLTLGRVKDRDVRILKDLLFDKEVVLVSSITLFESKLTPEGPIYTPIYRVNLG 192 Query: 176 Q 176 + Sbjct: 193 K 193 >UniRef50_D1CCP6 2'-5' RNA ligase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CCP6_THET1 Length = 194 Score = 173 bits (438), Expect = 3e-42, Method: Composition-based stats. Identities = 53/191 (27%), Positives = 78/191 (40%), Gaps = 15/191 (7%) Query: 1 MSEPQ-RLFFAIDLPAEIREQIIHW-RATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEK 58 MS+ + RLF AID+P IR + R+ + V N+HLTL FLG+VS + Sbjct: 1 MSDDKARLFLAIDIPKSIRSILYDLGRSGLAGSTGLKWVEESNIHLTLKFLGDVSRSQID 60 Query: 59 ALSLLAGRIRQP-GFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSG 114 A+ + I P L + G + R RV+W G+ L L + + AR G Sbjct: 61 AIQDVLEDITCPDSIGLEIRGLGIFGNLRRPRVLWAGVSGDIEALRLLHQEVEDKCARLG 120 Query: 115 CFQSNRPFHPHITLLRDASEAVTIPPPGFNW---------SYAVTEFTLYASSFARGRTR 165 + + PH+TL R P S+ LY S+ Sbjct: 121 FDRDVMEYRPHVTLARFKESFADTPSLRRLLGANNDVSLGSFIAESMVLYQSTLLPSGPV 180 Query: 166 YTPLKRWALTQ 176 YTP+K + L + Sbjct: 181 YTPVKTFNLIE 191 >UniRef50_A4BU36 2'-5' RNA ligase, putative n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BU36_9GAMM Length = 197 Score = 172 bits (436), Expect = 6e-42, Method: Composition-based stats. Identities = 51/174 (29%), Positives = 72/174 (41%), Gaps = 4/174 (2%) Query: 2 SEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALS 61 + QRLF A+ +R + GR V +NLH+TLAFLG+V E + Sbjct: 8 GDTQRLFLALWPDEGVRCAVARLARRL--VPDGRLVPPENLHVTLAFLGDVPGEAMPRVR 65 Query: 62 LLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 + + F L LD G W R R+ W+ P L +L LR ++G +R Sbjct: 66 AIGANLVGATFALELDRIGCWPRPRISWIAPSHTPAVLGRLNRELRQVLRKAGFPVPSRR 125 Query: 122 FHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALT 175 F PH+TL R ++ + + TL S R RY L W L Sbjct: 126 FAPHMTLARRSAPHAFHDVT--PVVWPIERITLIRSHLERAGARYEILCEWPLQ 177 >UniRef50_O28125 UPF0097 protein AF_2157 n=1 Tax=Archaeoglobus fulgidus RepID=Y2157_ARCFU Length = 176 Score = 170 bits (432), Expect = 2e-41, Method: Composition-based stats. Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 11/177 (6%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF A+D+ IRE++ + V +NLH+TL FLGEV EK + Sbjct: 1 MRLFVAVDVDDSIREKVKPILKELSGVSGVKAVEPENLHITLLFLGEVGEEKLARIEERL 60 Query: 65 GRIRQPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 + F ++ + G + RVVW+G+++ L +LAN + + + G + + Sbjct: 61 SEVTFQPFKISFEGVGAFPNPGSPRVVWIGVKEEGE-LTRLANSVYEKLKKLGFRRD-KD 118 Query: 122 FHPHITLLRDASEAVTIPPPGFNWS------YAVTEFTLYASSFARGRTRYTPLKRW 172 F H+T+ R + + +S V +F L S Y L+ + Sbjct: 119 FKAHLTVGRVKRKNPEVADIVRKYSSESFGEMEVRDFRLKQSILTPKGPIYKDLRVF 175 >UniRef50_C8SB57 2'-5' RNA ligase n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8SB57_FERPL Length = 179 Score = 170 bits (432), Expect = 2e-41, Method: Composition-based stats. Identities = 46/177 (25%), Positives = 76/177 (42%), Gaps = 11/177 (6%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF A+DL E+RE+I T + V +NLH+TL FLGEV E+ A+ Sbjct: 1 MRLFIAVDLSEELREKIAPILKTISELNGVKAVERENLHITLKFLGEVREERLPAIVEAL 60 Query: 65 GRIRQPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 ++ F + L G + +RV W+G+++ L +LA + S + G Sbjct: 61 KKVEFEPFKIYLKGFGFFPNDRYARVAWIGVKEGEEELKKLAESINSALKKVGFKPE--S 118 Query: 122 FHPHITLLRDASEAVT-----IPPPGFNWSY-AVTEFTLYASSFARGRTRYTPLKRW 172 F H+T+ R + ++ + V +F L S+ Y L+ + Sbjct: 119 FTAHVTIARVKKPEGRRIVEILRDLEDDFGWMEVKDFRLKKSTLTSKGPIYEDLEVY 175 >UniRef50_Q60BS9 Putative 2'-5' RNA ligase n=1 Tax=Methylococcus capsulatus RepID=Q60BS9_METCA Length = 190 Score = 168 bits (426), Expect = 9e-41, Method: Composition-based stats. Identities = 60/164 (36%), Positives = 80/164 (48%) Query: 8 FFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAGRI 67 FFA+ A +RE + + GR V D LHLTLAFLG V AE+ L+ + G + Sbjct: 14 FFALWPDAGVRETLGRLVRSLRRTVKGRWVEPDKLHLTLAFLGAVPAERLPELTAMTGDL 73 Query: 68 RQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPHIT 127 P F L LD W R+RV+ LG P LI+L +L S+ R+G RPF PH+T Sbjct: 74 DLPPFELALDRLEYWQRNRVLCLGASATPPLLIELVGILNSKLGRAGFPVERRPFRPHLT 133 Query: 128 LLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKR 171 L R A A + P + ++ V TL S +R Y Sbjct: 134 LARKAEAAWSAMPLKTSVTWPVDRVTLVESRLSRAGPLYLVRAE 177 >UniRef50_Q3JCL1 2',5' RNA ligase n=2 Tax=Nitrosococcus oceani RepID=Q3JCL1_NITOC Length = 177 Score = 167 bits (424), Expect = 1e-40, Method: Composition-based stats. Identities = 60/174 (34%), Positives = 77/174 (44%), Gaps = 2/174 (1%) Query: 3 EPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSL 62 E QRLFFA+ AEIREQ G+ V ++NLHLTL FLG + ++ Sbjct: 6 ETQRLFFALWPGAEIREQATQIAQRMLGKR-GKCVRSENLHLTLVFLGSTTEQQRACAEA 64 Query: 63 LAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 +A I F L L+ G W R RVVWL R+ P+ LI+L L G RP+ Sbjct: 65 VADTIEGTAFALRLEQIGYWSRPRVVWLAPRETPQPLIELVQQLNQGLTACGYQPEARPY 124 Query: 123 HPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ 176 H+TL R + + V F L S G Y L+ W L Q Sbjct: 125 RAHMTLARKVAGYFPAR-EVAPLACPVEHFYLVRSVSYPGGVEYQVLRSWPLAQ 177 >UniRef50_Q39PT9 2',5' RNA ligase n=4 Tax=Geobacter RepID=Q39PT9_GEOMG Length = 184 Score = 165 bits (419), Expect = 5e-40, Method: Composition-based stats. Identities = 52/181 (28%), Positives = 72/181 (39%), Gaps = 14/181 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF AIDLP E++ + R + D LHLTL F+GE A+ Sbjct: 1 MRLFVAIDLPDEVKRSVADI---CRGVPGVRWLPPDQLHLTLRFIGEEDDAVAAAIRRGL 57 Query: 65 GRIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 I P F L+L G + R RV+W+G+ L QL + + +G RP Sbjct: 58 AEITSPPFPLSLQGVGCFPSPRRPRVLWVGLSGGAP-LQQLQQKVEAAMVAAGILAEERP 116 Query: 122 FHPHITLLR-------DASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 F PHITL R D + + + V F LY+S A + + L Sbjct: 117 FSPHITLARLREHREGDVAPFLARNASFHCEPFTVDAFHLYSSILAAKGAIHRHEASYPL 176 Query: 175 T 175 Sbjct: 177 A 177 >UniRef50_A8U4H0 2'-5' RNA ligase n=1 Tax=alpha proteobacterium BAL199 RepID=A8U4H0_9PROT Length = 196 Score = 165 bits (418), Expect = 6e-40, Method: Composition-based stats. Identities = 50/183 (27%), Positives = 70/183 (38%), Gaps = 15/183 (8%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF AI +P + + + + R V D+ HLTL F+G+V L Sbjct: 1 MRLFVAIAMPEAVADPLCDLQGGLD---GARWVDPDDFHLTLRFIGDVDRGTADDLVATL 57 Query: 65 GRIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 + P F L L G + R R +W G+ +P L L + S A R+G R Sbjct: 58 SSLHAPAFDLRLSGLGHFGSGHRLRALWAGV-EPQPALTLLHGRVESAARRAGLPPEGRR 116 Query: 122 FHPHITLLR--------DASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWA 173 F PH+TL R AS + P + V E L+ S R Y Sbjct: 117 FVPHVTLARMSGPISDDSASHWIGSRSPFVAGPFPVREVVLFESFLGREGPHYERRLVVP 176 Query: 174 LTQ 176 L + Sbjct: 177 LDR 179 >UniRef50_A3DNW5 2'-5' RNA ligase n=1 Tax=Staphylothermus marinus F1 RepID=A3DNW5_STAMF Length = 193 Score = 164 bits (417), Expect = 9e-40, Method: Composition-based stats. Identities = 45/182 (24%), Positives = 70/182 (38%), Gaps = 13/182 (7%) Query: 2 SEPQRLFFAIDL-PAEIREQIIHWRATHFPPEA-GRPVAADNLHLTLAFLGEVSAEKEKA 59 E R+F AID+ + +Q+ R +A +PVA +N+H+TL F+GE + Sbjct: 6 GENLRVFVAIDILEPNVLDQLSKIRDLLLESKADLKPVATENMHITLRFIGETPLHLVNS 65 Query: 60 LSLLAGRIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCF 116 + G+I F + + G + R RV+W G+ Q L +L +++ + G Sbjct: 66 ICNDLGKIEFEPFKIRIKGVGVFPNIARPRVIWAGVSQGVENLSKLHDIVEKILRKHGVP 125 Query: 117 QSNRPFHPHITLLRDASEAVTIPPPGFNWSY--------AVTEFTLYASSFARGRTRYTP 168 F PHITL R S S V L S Y Sbjct: 126 PQREKFIPHITLARVKSGRNISRLVKIIESIADTDFGEVLVDRIVLKRSILTPSGPIYRD 185 Query: 169 LK 170 + Sbjct: 186 IC 187 >UniRef50_Q1QSH4 2',5' RNA ligase n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QSH4_CHRSD Length = 174 Score = 164 bits (417), Expect = 9e-40, Method: Composition-based stats. Identities = 51/170 (30%), Positives = 70/170 (41%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL 60 M+ +RLFFA+ R + P G P+ A+N+H+TLAFLG V + L Sbjct: 1 MTVSRRLFFALWPDDTTRRALAAEAQRLAPLCGGYPLPAENMHITLAFLGNVDEARIAPL 60 Query: 61 SLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 LA TLD G + + R+VW G + L+ L L AR G R Sbjct: 61 VALAQAWPALQGEWTLDRLGHFPKPRIVWAGSQASSPELMALDAELWQALARHGFTAPQR 120 Query: 121 PFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLK 170 F PH++L+R A A + L S G +RY L Sbjct: 121 DFTPHVSLVRQADRAAPASRLPTPIRWRFDRLALVESQLDNGGSRYRTLA 170 >UniRef50_A5D3U3 2'-5' RNA ligase n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D3U3_PELTS Length = 193 Score = 164 bits (417), Expect = 9e-40, Method: Composition-based stats. Identities = 48/189 (25%), Positives = 74/189 (39%), Gaps = 16/189 (8%) Query: 3 EPQRLFFAIDLPAEIREQIIHWRATHFPPEA-GRPVAADNLHLTLAFLGEVSAEKEKALS 61 RLF A++ P +I++ + + + V NLHLTL FLG V AE+ +++ Sbjct: 2 RQMRLFIAVNFPEQIKKALGAIIGELRQLPSDAKWVEEHNLHLTLQFLGNVPAEQVDSIA 61 Query: 62 LLAGRIRQ--PGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCF 116 GR F L L+ G + R RV+W G+ L +L + ++++ + G Sbjct: 62 AALGRSAAGVAPFRLNLNGVGVFPSRARPRVLWAGVSGETAVLSRLQHRVQTELGQLGFP 121 Query: 117 QSNRPFHPHITLLRDASEAVTIPPPGFNWSY----------AVTEFTLYASSFARGRTRY 166 R F PH+TL R S A + L S Y Sbjct: 122 AEKRQFSPHLTLARFRSPAGFSAVMERAEEIVRGLDKFGSAVIDSVELMLSELGARGPSY 181 Query: 167 TPLKRWALT 175 L R L+ Sbjct: 182 FVLARTPLS 190 >UniRef50_O57823 UPF0097 protein PH0099 n=10 Tax=Euryarchaeota RepID=Y099_PYRHO Length = 184 Score = 163 bits (413), Expect = 2e-39, Method: Composition-based stats. Identities = 40/186 (21%), Positives = 76/186 (40%), Gaps = 16/186 (8%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHF-PPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 R F AID+ +R+ ++ + + V +NLH+TL FLGE++ E+ + + + Sbjct: 1 MRAFIAIDVNESVRDSLVRAQDYIGSKEAKIKFVERENLHITLKFLGEITEEQAEEIKNI 60 Query: 64 AGRIR--QPGFTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQS 118 +I + + G + RV+W G+ + + ++A + + A+ G + Sbjct: 61 LKKIAEKYKKHEVKVKGIGVFPNPNYIRVIWAGI-ENDEIIREMAREIEDELAKLGFKKE 119 Query: 119 NRPFHPHITLLRDA--------SEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLK 170 F HITL R + + S+ V L S+ Y L Sbjct: 120 G-NFVAHITLGRVKFVKDKLGLTMKLKELANEDFGSFVVDAIELKKSTLTPKGPIYETLA 178 Query: 171 RWALTQ 176 R+ L++ Sbjct: 179 RFELSE 184 >UniRef50_B6IVY2 2'-5' RNA ligase, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6IVY2_RHOCS Length = 204 Score = 162 bits (411), Expect = 4e-39, Method: Composition-based stats. Identities = 49/181 (27%), Positives = 73/181 (40%), Gaps = 15/181 (8%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF + LP R+++ R V +N HLTL F+GEV + + Sbjct: 2 IRLFVGLPLPEASRDRLARLGPGF---PGVRRVPPENFHLTLRFIGEVDEGTAQDIDAAL 58 Query: 65 GRIRQPGFTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 + P F L L+ GQ+ R R +W G+ + L L + + S R+G R Sbjct: 59 DLVTAPPFPLMLEGLGQFGRGGRPRALWAGVAR-SEALAHLRDKVESAVVRAGQPAEERR 117 Query: 122 FHPHITLLRDASEAVTIPP--------PGFNWSYAVTEFTLYASSFARGRTRYTPLKRWA 173 F PH+TL R +EA V F L+ S +G + Y L+ + Sbjct: 118 FMPHVTLARLTAEAPAHRIGRFIAENGLFREGPLPVDRFVLFESVLGKGGSIYHELRSYP 177 Query: 174 L 174 L Sbjct: 178 L 178 >UniRef50_Q9X2H4 UPF0097 protein TM_1860 n=9 Tax=Thermotogaceae RepID=Y1860_THEMA Length = 187 Score = 162 bits (410), Expect = 6e-39, Method: Composition-based stats. Identities = 47/181 (25%), Positives = 74/181 (40%), Gaps = 13/181 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRATH-FPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 R F AID+ E+++Q V+ +N+HLTL FLGEV +K ++ Sbjct: 1 MRTFIAIDVNEEVKKQASEIIEKLMKRGFGATWVSEENMHLTLFFLGEVDEQKISEIAEH 60 Query: 64 AGR--IRQPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQS 118 R P F+ T+ G + R RV WLG+ + L++L LR++ + G Sbjct: 61 LCRRVRGFPSFSFTVKGFGYFKRKMSPRVFWLGV-ENTDRLMKLYEELRNELSHHGFSFE 119 Query: 119 NRPFHPHITLLRDASEAVTIPPPGFNWSYA-----VTEFTLYASSFARGRTRYTPLKRWA 173 + F PHIT+ R + + V F +Y+S+ Y L Sbjct: 120 EK-FVPHITIGRVKYYPDKWEKLIEDIDFPPIEVAVDRFKIYSSTLTPTGPIYKVLYECQ 178 Query: 174 L 174 Sbjct: 179 F 179 >UniRef50_Q64CX2 TRNA nucleotidyltransferase n=2 Tax=environmental samples RepID=Q64CX2_9ARCH Length = 193 Score = 161 bits (408), Expect = 1e-38, Method: Composition-based stats. Identities = 43/194 (22%), Positives = 62/194 (31%), Gaps = 24/194 (12%) Query: 5 QRLFFAIDLPAEIREQIIHWRATH----FPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL 60 R F A+DL EIRE+I + + V +H T+ FLGEV + + Sbjct: 1 MRSFIALDLSKEIRERIKEIQKQFVGLEQSGAKLKFVNPWQMHQTVKFLGEVPEDNVDLI 60 Query: 61 SLLAGRIRQPGFTLTLDDAGQWLRS--------RVVWLGMRQPPRGLIQLANMLRSQAAR 112 I Q F + L G + + RV+W+G+ + L L + S+ Sbjct: 61 KNSLSEISQKPFDIELRGVGFFPEAKLEKARNIRVIWIGIWRGIEELKALQADVESKMQV 120 Query: 113 SGCFQSNRPFHPHITLLRDASEAVTIPPPG-----------FNWSYAVTEFTLYASSFAR 161 G R F H TL R V E L S+ Sbjct: 121 LGFPFEKR-FSAHTTLCRVKKPLSREELGPILNKIAGLRDVEAGKMHVEELKLKKSTLTP 179 Query: 162 GRTRYTPLKRWALT 175 Y + L Sbjct: 180 KGPIYEDIYVKKLV 193 >UniRef50_Q1IPR0 2',5' RNA ligase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IPR0_ACIBL Length = 190 Score = 161 bits (407), Expect = 1e-38, Method: Composition-based stats. Identities = 58/193 (30%), Positives = 86/193 (44%), Gaps = 25/193 (12%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLFFA+D+P+EIR + + + R +A ++ H+TL FLGEV + + Sbjct: 1 MRLFFALDIPSEIRRSLTDYVDSLRRVPGVRFMAPESYHVTLKFLGEV--QDVERAKSAV 58 Query: 65 GRIRQPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 +R P F + D G + RV W G+ GL LA L A++G + +RP Sbjct: 59 ATVRSPRFEVAFCDVGFFPNAKAPRVFWAGIHAD-EGLPNLATALEDALAQAGFPREDRP 117 Query: 122 FHPHITLLRDASEAVTIP-------------------PPGFNWSYAVTEFTLYASSFARG 162 FHPH+TL R+ S + PP + +EF LY S + Sbjct: 118 FHPHLTLARNGSGSPRPRGDEQPVAGFRALVYLAEKNPPPEFGTMTASEFFLYESKLSPR 177 Query: 163 RTRYTPLKRWALT 175 +Y L R+ LT Sbjct: 178 GAQYNKLARFPLT 190 >UniRef50_Q58963 UPF0097 protein MJ1568 n=11 Tax=Methanococcales RepID=Y1568_METJA Length = 173 Score = 161 bits (407), Expect = 1e-38, Method: Composition-based stats. Identities = 44/179 (24%), Positives = 75/179 (41%), Gaps = 17/179 (9%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF AID+P I+E+I ++ + + V +NLH+T+ FLGEV EK K + L Sbjct: 1 MRLFLAIDIPENIKEEIAKFQEQF-KMKGIKLVEKENLHITVKFLGEVDEEKLKEILNL- 58 Query: 65 GRIRQPGFTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 + + L G + S RV+W+G L+++ + + + G + R Sbjct: 59 -DLSIQPIKIKLKYIGTFPNSNYIRVIWIG--AYNNNLVEIFKEIDEKLSNLGFKKE-RE 114 Query: 122 FHPHITLLRDA--------SEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRW 172 + PH+T+ R + + + LY S+ Y +K W Sbjct: 115 YVPHLTIGRVKFIDNKKKLKDRIEKYKDVDFGEFEAKHIKLYKSTLTPNGPIYEVIKEW 173 >UniRef50_D1C514 2'-5' RNA ligase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C514_SPHTD Length = 194 Score = 160 bits (406), Expect = 2e-38, Method: Composition-based stats. Identities = 51/190 (26%), Positives = 73/190 (38%), Gaps = 16/190 (8%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFPP-EAGRPVAADNLHLTLAFLGEVSAEKEKA 59 M + RLF AI++P E+R+++ R + V + HLTL F G V + A Sbjct: 1 MQDVWRLFAAIEIPPEVRDRVAAVRDRLRDAGWRAKWVTPEGTHLTLKFYGNVPVDDIPA 60 Query: 60 LSLLA--GRIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSG 114 L FT+ AG + R RV+WLG+ R L L + +A G Sbjct: 61 LGAALRPAVATARPFTIEAAGAGAFPNPRRPRVLWLGVAGDVRRLGALQRSVEQASAAQG 120 Query: 115 CFQSNRPFHPHITLLRDASE----------AVTIPPPGFNWSYAVTEFTLYASSFARGRT 164 R FHPH+T+ R E + V TL+ S R Sbjct: 121 YPPEERAFHPHLTVARVRPEDLGSLRDVERRLAEIAALPPLPIPVDRVTLFRSELRRTGA 180 Query: 165 RYTPLKRWAL 174 YT + + L Sbjct: 181 VYTVVDEFPL 190 >UniRef50_C0GSW7 2'-5' RNA ligase n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GSW7_9DELT Length = 189 Score = 160 bits (406), Expect = 2e-38, Method: Composition-based stats. Identities = 45/185 (24%), Positives = 68/185 (36%), Gaps = 13/185 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGR--PVAADNLHLTLAFLGEVSAEKEKALSL 62 R+FF I LP ++ + R R N H+TL FLGEV + + + Sbjct: 1 MRIFFGIPLPEVYQQMLGQARNEWKKRFRSRLSWTRPGNWHITLRFLGEVQDDLLPQVKV 60 Query: 63 LAGRIRQPGFTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 R+ F L +G + + RV WLG+ + L+ LA L + G Sbjct: 61 CLDRVEFEDFCLQGSKSGYFGSAGQYRVAWLGVDGEVQKLMNLARTLEKELEGFGFEPEK 120 Query: 120 RPFHPHITLLRDASEAVTIPPPGFN--------WSYAVTEFTLYASSFARGRTRYTPLKR 171 RPF H+TL R + P F+ + L+ S Y+ L Sbjct: 121 RPFKAHLTLARIKNFVADDPWKEFSDYVENMGWPEFNAERINLWQSRLTPAGPEYSVLAH 180 Query: 172 WALTQ 176 L + Sbjct: 181 KPLHR 185 >UniRef50_A1AS05 2'-5' RNA ligase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AS05_PELPD Length = 186 Score = 160 bits (406), Expect = 2e-38, Method: Composition-based stats. Identities = 64/180 (35%), Positives = 85/180 (47%), Gaps = 14/180 (7%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF AIDLP +R+ + + P R V AD LHLTLAFLG+V E+ L+ Sbjct: 3 RLFIAIDLPEVVRQDLCRL---NVPIPGSRWVPADQLHLTLAFLGDVGEERVAGLARALD 59 Query: 66 RIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 ++ F L D G + R RV+W+G++ P L+ LA+ LR Q RPF Sbjct: 60 QVSAAPFRLRFDRLGCFPSRARPRVLWVGLK-PEPLLLSLADRLREFLRDCCIPQEERPF 118 Query: 123 HPHITLLRDASEAVT-------IPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALT 175 PHITL R A P S + EF L+ S +TPLKR+ L+ Sbjct: 119 SPHITLARLKLPAARECASFLDRPLALERTSVSAQEFILFESLLTAAGAIHTPLKRFPLS 178 >UniRef50_A6EV98 2',5' RNA ligase n=1 Tax=Marinobacter algicola DG893 RepID=A6EV98_9ALTE Length = 190 Score = 160 bits (405), Expect = 2e-38, Method: Composition-based stats. Identities = 49/182 (26%), Positives = 83/182 (45%), Gaps = 13/182 (7%) Query: 3 EPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSL 62 E RLFF +++P ++++++ + P R D LHLTL FLG V+ ++ + Sbjct: 5 ETHRLFFGLEIPDLVKQRLVSIQQ---PVAGARWQRPDQLHLTLVFLGSVARQRLPDVCD 61 Query: 63 LAGRIRQPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 A + F LT+ G + R + +W G+ QP L +L +L + G Q Sbjct: 62 AARNLPVEQFDLTVCGLGCFGRPDFPKNLWAGV-QPADTLAELHEVLNQRLCMPGFEQEK 120 Query: 120 RPFHPHITLLRDA------SEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWA 173 RPF PHITL R +E + +++V L+ S+ + Y ++R+ Sbjct: 121 RPFCPHITLSRFKGQRGSVAELLEFQERQPVGTFSVDGIALFESTQGAYGSVYQIIERFP 180 Query: 174 LT 175 L Sbjct: 181 LA 182 >UniRef50_B8FL01 2'-5' RNA ligase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FL01_DESAA Length = 192 Score = 160 bits (405), Expect = 2e-38, Method: Composition-based stats. Identities = 42/190 (22%), Positives = 67/190 (35%), Gaps = 14/190 (7%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFP-PEAGRPVAADNLHLTLAFLGEVSAEKEKA 59 M+ R F A+++P E+++ + + R V +HLTL FLG+V Sbjct: 1 MTRKLRTFIAVEIPEEVKQAVSRAQGGFKASGLPFRWVNPKGMHLTLKFLGDVLQSDIDG 60 Query: 60 LSLLAGRIR--QPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSG 114 + + T T G + ++RV+W G+ GL +LA+ L G Sbjct: 61 VVQVMKECTAGFAPMTFTAKGFGAFPNFSKARVLWTGLAGDAAGLAKLASCLEQGLEPLG 120 Query: 115 CFQSNRPFHPHITLLRDASEAVTIPPP--------GFNWSYAVTEFTLYASSFARGRTRY 166 N+ F HITL R + V L+ S Y Sbjct: 121 FEAENKRFSAHITLGRAKGRIDPKALLQAVEKAGSFETQKFTVDRIILFKSDLRPTGAVY 180 Query: 167 TPLKRWALTQ 176 T L + + Sbjct: 181 TALAHASFGR 190 >UniRef50_B5E8F5 2'-5' RNA ligase n=3 Tax=Geobacter RepID=B5E8F5_GEOBB Length = 184 Score = 160 bits (405), Expect = 2e-38, Method: Composition-based stats. Identities = 48/177 (27%), Positives = 73/177 (41%), Gaps = 14/177 (7%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF AIDLP EI+ + R VA +HLTL F+G+V + + Sbjct: 3 RLFVAIDLPEEIKASLSQL---SCAVTGARWVAPSEIHLTLRFIGDVDPQTVSKIEKALS 59 Query: 66 RIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 ++ P F L + G + RV+W+G+ +P LI L + S +G +RPF Sbjct: 60 AVQFPSFPLRVAGVGHFPARGYPRVLWVGL-EPHPELIALQQRIESALQPAGVSPEDRPF 118 Query: 123 HPHITLLRDASEAVTIPPPGFNW-------SYAVTEFTLYASSFARGRTRYTPLKRW 172 PHITL R + + TE+ LY+S + + + Sbjct: 119 SPHITLARLKETPPAAVAAFESLHRGLAYPPFPATEYVLYSSVLTPKGAIHRKEEVF 175 >UniRef50_Q2Y753 2',5' RNA ligase n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y753_NITMU Length = 195 Score = 160 bits (405), Expect = 2e-38, Method: Composition-based stats. Identities = 57/172 (33%), Positives = 80/172 (46%), Gaps = 4/172 (2%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLFFAI E Q+ GR A+N+HLTL F+GEV+A + +AL A Sbjct: 11 RLFFAIWPDKETCMQLDRLTGRLASVCEGRKTKAENIHLTLVFVGEVNASQVEALCRAAD 70 Query: 66 RIR---QPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 I F L ++ W R +V+ + + PR L+ L L+S + G R + Sbjct: 71 EIEGHGVRAFDLVIERICVWKRKNIVYAEINEVPRPLMDLVEALQSSLSLVGFSLEERSY 130 Query: 123 HPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 PHITL+R+AS T+P + E+ L S YTP+ RW L Sbjct: 131 KPHITLMRNAS-CKTLPERAEPMVWRAREWVLVKSDQTSDGPVYTPIGRWFL 181 >UniRef50_Q5NYK1 2'-5' RNA ligase n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NYK1_AZOSE Length = 201 Score = 159 bits (403), Expect = 3e-38, Method: Composition-based stats. Identities = 54/175 (30%), Positives = 76/175 (43%), Gaps = 5/175 (2%) Query: 2 SEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALS 61 +P R+FFA+ A + +++ A GR + LHLTLAF+G+VS ++ L Sbjct: 9 GKPSRVFFALWPDARVAKRLDELGAEAHAECGGRRTRCETLHLTLAFIGDVSPQRLAELI 68 Query: 62 LLAGRIR----QPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQ 117 + +R FTL LD G W +R+VW G + P L L L + Sbjct: 69 AVGNEVRNDREATSFTLRLDLLGSWRHNRIVWAGAQSCPAPLAGLVERLNGALEAADFAV 128 Query: 118 SNRPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRW 172 RPF PH+TLLR A V+ + V F L S Y L+ W Sbjct: 129 ERRPFAPHVTLLRKAHTQVSTRCVD-PIDWPVDGFVLVESVQTSTGAHYRTLREW 182 >UniRef50_A1RX48 2'-5' RNA ligase n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RX48_THEPD Length = 187 Score = 159 bits (403), Expect = 3e-38, Method: Composition-based stats. Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 12/186 (6%) Query: 1 MSEPQRLFFAIDLP-AEIREQIIHWRATHFPP-EAGRPVAADNLHLTLAFLGEVSAEKEK 58 M+ R F A+ + + +++ ++ + + V +NLH+TL FLGE+ + Sbjct: 1 MTNLIRSFVAVKVSSPSVLQRVEALQSDLRDAGLSAKFVEKENLHITLRFLGEIPPHTLE 60 Query: 59 ALSLLAGRIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGC 115 + ++ F + L G + R RV+W+G+ + R L +LA ++R+ Sbjct: 61 EVRNRLAKLSYHRFKIVLKGVGGFPSLDRPRVLWIGVDEGSRELSELAELVRTSLKGVKL 120 Query: 116 FQSNRPFHPHITLLR-------DASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTP 168 + + FHPH+T+ R A + VT F+LY S+ Y Sbjct: 121 PEPDEEFHPHLTIARLKGPLSAGARRIIAGSADTVFGEQEVTSFSLYKSTLTPRGPIYDE 180 Query: 169 LKRWAL 174 + R+ L Sbjct: 181 IARYDL 186 >UniRef50_B5JNL9 2'-5' RNA ligase n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JNL9_9BACT Length = 183 Score = 159 bits (402), Expect = 5e-38, Method: Composition-based stats. Identities = 51/182 (28%), Positives = 78/182 (42%), Gaps = 14/182 (7%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 R F A+DLP E R ++ R++ + + +H+TL F+GE+ E+ + L Sbjct: 5 RYFIAVDLPEEHRRELTGLRSS---GKGFAWTRLERMHVTLRFIGELEGEQVERLVEGLA 61 Query: 66 RIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 + F L L+ AG + R RV+W+G+ L QL + + G R F Sbjct: 62 VVEVERFVLPLEGAGIFPARGRPRVLWVGVGSGHPRLFQLRQRIDDLLLKLGIEADVRSF 121 Query: 123 HPHITLLRD--------ASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 HPH+T+ R A+E V + V F LYAS RY + +AL Sbjct: 122 HPHVTIARIRDGSSVNSATEWVKRRREFVGAPFRVEGFVLYASRLYSNGARYERVAEYAL 181 Query: 175 TQ 176 Sbjct: 182 GD 183 >UniRef50_A8MDT9 2'-5' RNA ligase n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MDT9_CALMQ Length = 181 Score = 158 bits (400), Expect = 8e-38, Method: Composition-based stats. Identities = 46/174 (26%), Positives = 71/174 (40%), Gaps = 11/174 (6%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEA-GRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF A+DL E+R ++I +R A +PV +NLH+TL FLGEV + Sbjct: 3 RLFVAVDLSDEVRGKVIAFRDAVSSSGADVKPVEDENLHITLRFLGEVRDNLLPEIMRNL 62 Query: 65 GRIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 + F + + G + RV+W+G+ + L L + + R G R Sbjct: 63 NSLSFSSFRMHVKGTGAFPSASSPRVIWVGVEEGGDQLKALHDTVEELVGRYGVS-DERE 121 Query: 122 FHPHITLLRDASEAVTI-----PPPGFNWSY-AVTEFTLYASSFARGRTRYTPL 169 F PHIT+ R + F++ + V L S+ Y L Sbjct: 122 FTPHITVARVRGRGSVLGKLINQWRDFDFGWQTVDSVILKKSTLTPRGPIYENL 175 >UniRef50_C4ZJW1 2'-5' RNA ligase n=1 Tax=Thauera sp. MZ1T RepID=C4ZJW1_THASP Length = 186 Score = 158 bits (399), Expect = 9e-38, Method: Composition-based stats. Identities = 57/173 (32%), Positives = 77/173 (44%), Gaps = 1/173 (0%) Query: 4 PQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 RLFFA+ A R + GR + D +HLTLAFLGE + + L + Sbjct: 13 NLRLFFALWPDAATRAGLHARARALHSECGGRAMRRDTIHLTLAFLGETPVRQVERLRAV 72 Query: 64 AGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 A ++ GF L LD G W R+R++W G P L LA L + GC R F Sbjct: 73 AAGVQGEGFALDLDRVGSWHRNRILWTGPSMVPPALAALAQDLEGRLRADGCALEARAFS 132 Query: 124 PHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ 176 PH+TL+R+A A + V F L AS + Y + RW L + Sbjct: 133 PHVTLVRNAHAAPREAQLA-PLRWTVGSFVLVASELSAAGAHYRTIGRWPLKR 184 >UniRef50_Q2LPL4 2'-5' RNA ligase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LPL4_SYNAS Length = 195 Score = 158 bits (399), Expect = 1e-37, Method: Composition-based stats. Identities = 45/188 (23%), Positives = 69/188 (36%), Gaps = 15/188 (7%) Query: 3 EPQRLFFAIDLPAEIREQIIHWRATHF--PPEAGRPVAADNLHLTLAFLGEVSAEKEKAL 60 EP R F AI+ P +R+ + + A V + +HLTL F G ++ + Sbjct: 5 EPIRAFLAIEPPEAVRQAMAAVQNRLKYCMSGAISWVRPEGIHLTLKFFGNIAETDVDRI 64 Query: 61 SLLAGRI--RQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGC 115 S G + R L + G + R RVVW+G+ L L + Q AR G Sbjct: 65 SAAVGPVASRFAPLDLQVRQVGLFPDFRRPRVVWMGLEGDISALKALQQEVDKQLARYGF 124 Query: 116 FQSNRPFHPHITLLRDAS--------EAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYT 167 + +R F H+TL R S + + TL+ S Y+ Sbjct: 125 HREDRDFRAHLTLARIKSSRGLSGLDRVMKKSDGYEAGRFRAAGLTLFRSDLTPQGAIYS 184 Query: 168 PLKRWALT 175 L + Sbjct: 185 KLAGYPFQ 192 >UniRef50_Q2BMM5 2',5' RNA ligase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMM5_9GAMM Length = 173 Score = 156 bits (395), Expect = 3e-37, Method: Composition-based stats. Identities = 45/174 (25%), Positives = 68/174 (39%), Gaps = 10/174 (5%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF AID+P I++Q+ E R ++ LH+TL F+GE + + Sbjct: 1 MRLFLAIDIPDAIQDQVSELV--CPELEQVRWISCQQLHITLVFIGEQPQHRLDEIIEAT 58 Query: 65 GRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHP 124 F L L G + +S ++WLG+ + L +L L + G R F P Sbjct: 59 AETNFEPFPLKLSKIGHF-KSGIIWLGVEE-SEPLKRLQKSLSHKIRSLGIELEQRKFIP 116 Query: 125 HITLLRDAS------EAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRW 172 H+TL R V+ GF + V F L +S Y + Sbjct: 117 HLTLGRCKQLTPEILSKVSTQGLGFETGFNVEAFQLKSSILKANGAEYVTEGEF 170 >UniRef50_Q3Z6J0 2'-5' RNA ligase family protein n=5 Tax=Dehalococcoides RepID=Q3Z6J0_DEHE1 Length = 193 Score = 156 bits (395), Expect = 3e-37, Method: Composition-based stats. Identities = 49/193 (25%), Positives = 80/193 (41%), Gaps = 18/193 (9%) Query: 1 MSEP-QRLFFAIDLPAEIREQIIHWRATHF-PPEAGRPVAADNLHLTLAFLGEVSAEKEK 58 M+E R F AI+LP E++ ++ R P +A + V +++HLT+ FLG+ + Sbjct: 1 MTEGLIRTFIAIELPPELKTRLAGLRDALPIPSQAVKWVNPESMHLTIKFLGDTPLSQIP 60 Query: 59 ALSLLAGRIRQ--PGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARS 113 + Q FTL+ G + +V+WLG+ L L + + Sbjct: 61 NIIKGLEEAAQVCHAFTLSTTRIGTFPSLSSPKVIWLGLHGEIEKLNTLFAEVEKNISGL 120 Query: 114 GCFQSNRPFHPHITLLRD-----------ASEAVTIPPPGFNWSYAVTEFTLYASSFARG 162 G R F PH+TL R A+E++ PP S+ + L+ S Sbjct: 121 GFPAEKRDFAPHLTLGRLKEVAAKSDLQTAAESLKTAPPFPKTSFKASHICLFQSQLLAA 180 Query: 163 RTRYTPLKRWALT 175 YT L + +L Sbjct: 181 GPVYTRLAQISLA 193 >UniRef50_Q3SK36 2',5' RNA ligase n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SK36_THIDA Length = 183 Score = 156 bits (395), Expect = 3e-37, Method: Composition-based stats. Identities = 55/173 (31%), Positives = 74/173 (42%), Gaps = 2/173 (1%) Query: 4 PQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 RLFFA+ R+ + GR + A+ LH+TLAFLG A++ AL Sbjct: 11 SLRLFFALWPDDATRDALDRTGKWLHRHWGGRRMRAETLHITLAFLGTTPADRLDALIGC 70 Query: 64 AGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 A I F L LD G W + V WLG + P + L L + G R Sbjct: 71 ADGIAAEPFALVLDRPGYWRHNHVGWLGASEAPPPHLALVTALNAALQAGGFPVDARAHV 130 Query: 124 PHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ 176 PH+TLLR+ A P S+AV +F L S +Y ++RW L Sbjct: 131 PHVTLLRN--TAGGDLPLCRPVSWAVPDFVLVRSRTDPTGAQYEVIRRWLLVH 181 >UniRef50_B8CXC1 2'-5' RNA ligase n=1 Tax=Halothermothrix orenii H 168 RepID=B8CXC1_HALOH Length = 189 Score = 156 bits (395), Expect = 3e-37, Method: Composition-based stats. Identities = 44/190 (23%), Positives = 72/190 (37%), Gaps = 22/190 (11%) Query: 5 QRLFFAIDLPAEIREQIIH----WRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL 60 RLF A+++P ++ I + + V DN H+TL F+GEV EK + Sbjct: 1 MRLFIAVNIPDRTKDLIERKLITIKRQVRQ--GIKWVKKDNWHITLKFIGEVGDEKVSEI 58 Query: 61 SLLAGRI--RQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGC 115 I R F++T++ G + R RV++L +++ L + +L G Sbjct: 59 KDSLESISERVKPFSITINGPGAFPDITRPRVMYLSIKEGSDNLTSVYKLLEKDLIDRGF 118 Query: 116 FQSNRPFHPHITLLRDASE-----------AVTIPPPGFNWSYAVTEFTLYASSFARGRT 164 +R F PH+TL R V F + + +L S R Sbjct: 119 KADDREFTPHLTLARSRRRTDLNQLSKRLNKVVESLEDFKARVNINKLSLMKSELYRTGP 178 Query: 165 RYTPLKRWAL 174 Y + L Sbjct: 179 VYKEIFSVFL 188 >UniRef50_B8D3G7 2'-5' RNA ligase n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D3G7_DESK1 Length = 192 Score = 156 bits (394), Expect = 4e-37, Method: Composition-based stats. Identities = 46/187 (24%), Positives = 72/187 (38%), Gaps = 13/187 (6%) Query: 2 SEPQRLFFAIDL-PAEIREQIIHWRATHFP-PEAGRPVAADNLHLTLAFLGEVSAEKEKA 59 E R F AI+L E+ ++I R +PV +N+HLTL F+GEV Sbjct: 6 GEIIRCFIAIELKNQEVLRRLIEIRDKITATGVDLKPVEDENIHLTLRFIGEVPRSVVDE 65 Query: 60 LSLLAGRIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCF 116 + I GF + + + G + R RV+W G+ + L++L ++ + R G Sbjct: 66 VCGFINTISYKGFKIHVKNIGGFPSLERPRVIWAGIEEGSDELLELYRIVEAGLRRIGIK 125 Query: 117 QSNRPFHPHITLLRDA-----SEAVTIPPPGFNWSY---AVTEFTLYASSFARGRTRYTP 168 F PHITL R + V + V E + S Y+ Sbjct: 126 PEREEFTPHITLARVKGYRGIEKLVKTLMELRGTDFGYSPVEEVIVKKSVLTPRGPIYSN 185 Query: 169 LKRWALT 175 + L Sbjct: 186 ICVKKLA 192 >UniRef50_Q72W43 2'-5' RNA ligase n=2 Tax=Leptospira interrogans RepID=Q72W43_LEPIC Length = 182 Score = 156 bits (394), Expect = 4e-37, Method: Composition-based stats. Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 14/180 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 R F I +P EI+EQ+ + R V +N H+TL FLGE S+E LS Sbjct: 1 MRTFLGISIPEEIKEQLTSI---CYGLSDIRWVPKENFHITLVFLGEQSSECLDILSDFC 57 Query: 65 GRIRQPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 I F L+L G + + +++ ++ P L QL L S + G + Sbjct: 58 SEISFTEFDLSLKSVGTFGKQKSPSILFAAVK-PSIELSQLHKTLDSGIRKLGFSIDRQN 116 Query: 122 FHPHITLLRDASEA-------VTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 + PH+T+ R + + + ++ V+EF +Y+S Y+ + ++L Sbjct: 117 YQPHLTIGRFKNSNETRVIMYLEEFANFVSSNFKVSEFHIYSSKTFSNGPVYSIEESFSL 176 >UniRef50_Q1PYI6 Similar to 2'-5' RNA ligase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PYI6_9BACT Length = 187 Score = 156 bits (394), Expect = 4e-37, Method: Composition-based stats. Identities = 40/178 (22%), Positives = 70/178 (39%), Gaps = 14/178 (7%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEA-GRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF AI++ +RE+++H++ A + VA +NLH+TL F+G EK + + Sbjct: 4 RLFIAIEITDAVREKVLHFQNDLKKASADVKWVAPENLHITLKFIGNTDEEKICGIVDVI 63 Query: 65 GR--IRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 + I F + AG + RV++ G L + L G Sbjct: 64 HQSVIEIKPFDIRYSGAGTFPAGKYPRVIFAGAVDSSGALASIYERLNRHLTALGVPYDE 123 Query: 120 RPFHPHITLLRDA-----SEAVTIPPPGFNWSY---AVTEFTLYASSFARGRTRYTPL 169 F HIT+ R + + +++ ++ L S+ R YT + Sbjct: 124 HTFEAHITVGRVKTHKNIKKLMECVHSYKEFTFGQESIDHLVLMKSNLTREGPIYTRI 181 >UniRef50_Q0AGI2 2'-5' RNA ligase n=2 Tax=Nitrosomonas RepID=Q0AGI2_NITEC Length = 177 Score = 155 bits (392), Expect = 7e-37, Method: Composition-based stats. Identities = 55/174 (31%), Positives = 78/174 (44%), Gaps = 2/174 (1%) Query: 2 SEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALS 61 + P RLF A+ R+Q+ +GR + NLHLTLAF+GE+ L Sbjct: 5 AHPVRLFLALWPQDIARDQLAKLARQLADDCSGRCIQPKNLHLTLAFMGEIDQGNIPRLC 64 Query: 62 LLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN-R 120 A IRQ F LTLD W ++ VV G Q P L L L+ + + Sbjct: 65 QAAPAIRQSPFNLTLDKVCFWKKAGVVVAGTSQCPAELTTLVQDLQHLLSALRIRYDDTY 124 Query: 121 PFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 PF PH+TL+R+ ++P + VT+++L S + Y L WAL Sbjct: 125 PFTPHVTLVRNVRHC-SLPDSIQAIDWPVTQWSLAQSRQTPYESVYQSLADWAL 177 >UniRef50_Q1NWG3 2',5' RNA ligase n=4 Tax=Deltaproteobacteria RepID=Q1NWG3_9DELT Length = 181 Score = 154 bits (391), Expect = 8e-37, Method: Composition-based stats. Identities = 48/182 (26%), Positives = 74/182 (40%), Gaps = 15/182 (8%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF A+DLP + E + F R + A+ LHLTL F+GEV K + G Sbjct: 3 RLFTAVDLPPAVAESLAAMG---FGLPGARWLPAEQLHLTLRFIGEVDGGIFKDIRAALG 59 Query: 66 RIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGC-FQSNRP 121 +R FT+ L G + +RV+W G+ +P + +L + R G R Sbjct: 60 DVRSAPFTIELRGFGCFPPRGPARVLWAGV-EPAAPVTELCKRVEKALVRPGLVAPEKRK 118 Query: 122 FHPHITLLRDASEAVTIPPPGFNW-------SYAVTEFTLYASSFARGRTRYTPLKRWAL 174 F PH+T+ R ++ V +F LY+S +T + L Sbjct: 119 FAPHVTVARLDKVPSNRLGQFLAGNNLYTSETFTVAQFHLYSSELTPKGPYHTLEASYQL 178 Query: 175 TQ 176 + Sbjct: 179 DR 180 >UniRef50_B1ZYS3 2'-5' RNA ligase n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZYS3_OPITP Length = 189 Score = 154 bits (391), Expect = 9e-37, Method: Composition-based stats. Identities = 49/182 (26%), Positives = 71/182 (39%), Gaps = 13/182 (7%) Query: 3 EPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSL 62 + QRLF A+ LP +R+ + R + LHLTL FLG+ E+ L Sbjct: 2 DTQRLFIAVPLPPAVRDLVASLTVPLRE---VRWTRDEQLHLTLRFLGDTPVEQIDPLCA 58 Query: 63 LAGRIRQPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 I+ F L ++ G + RV+W+G+ L QL + G Sbjct: 59 RLAAIQVEPFLLPVERVGAFPPKASPRVIWVGVGSGHPRLHQLRQKIDDAVLACGLDADL 118 Query: 120 RPFHPHITLLRD-------ASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRW 172 R FHPHITL R + + S+ V F LYAS + +R+ Sbjct: 119 RTFHPHITLGRCQDGARNGVQQWLRHHADFAGPSFRVDAFELYASELHSAGAIHHLRQRF 178 Query: 173 AL 174 L Sbjct: 179 PL 180 >UniRef50_B1I1T7 2'-5' RNA ligase n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I1T7_DESAP Length = 195 Score = 154 bits (391), Expect = 9e-37, Method: Composition-based stats. Identities = 50/189 (26%), Positives = 78/189 (41%), Gaps = 16/189 (8%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFPPE-AGRPVAADNLHLTLAFLGEVSAEKEKA 59 MSE RLF+A++LP ++ ++ +A + V +NLHLT+ FLGEV + + A Sbjct: 1 MSE-LRLFWAVNLPGGLKAELGRLQAELQNLPVDLKWVEQENLHLTVKFLGEVDSSRVSA 59 Query: 60 LSLLAGRIRQP--GFTLTLDDAGQWLR-SRVVWLGMRQPPRGLIQLANMLRSQAARSGCF 116 L+ F+L L G + R RV+W+G+ L +L + A G Sbjct: 60 LTRAVSGSVSGLVPFSLELTGWGTFGRPPRVLWIGVGGAVEKLQELWVRVDRALAPLGFP 119 Query: 117 QSNRPFHPHITLLRDASEAVTIPPPGFNWS----------YAVTEFTLYASSFARGRTRY 166 + F PH+TL R S + + V L S+ R Y Sbjct: 120 AE-KSFSPHLTLGRLRSARNVAALRERAGALAADRGSWGGFTVDRVDLMQSTLTRQGPVY 178 Query: 167 TPLKRWALT 175 + AL+ Sbjct: 179 RVVSTAALS 187 >UniRef50_Q2VZ42 2'-5' RNA ligase n=2 Tax=Magnetospirillum RepID=Q2VZ42_MAGSA Length = 178 Score = 154 bits (390), Expect = 1e-36, Method: Composition-based stats. Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 14/180 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF I E+ +I + R + NLHLTL F+GEV + + + Sbjct: 2 IRLFVGIGFDEELTARIATLQRGL---PGARWIEPANLHLTLRFIGEVDEDLAEEIHRGL 58 Query: 65 GRIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 + +P F LTL G + ++ +WLG+ + L +LA + S A ++G R Sbjct: 59 DALVEPPFALTLAGLGLFGDRHQAHTLWLGVER-SDALSRLAARIESAAVQAGAEPETRR 117 Query: 122 FHPHITLLRDASEAV-------TIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 F+PH+TL R P AV FTL+ S+ R +Y L+ + L Sbjct: 118 FNPHVTLARLKHTPPGRIQDFIDATGPFREEHVAVERFTLFRSTLGRQGAQYDALEHYPL 177 >UniRef50_B3EA65 2'-5' RNA ligase n=1 Tax=Geobacter lovleyi SZ RepID=B3EA65_GEOLS Length = 184 Score = 154 bits (390), Expect = 1e-36, Method: Composition-based stats. Identities = 58/177 (32%), Positives = 79/177 (44%), Gaps = 12/177 (6%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF AI+LP +++Q+ A R V + LHLTLAFLGEV+ + L+ Sbjct: 1 MRLFVAIELPEAVQQQLSLLHAELT---GVRWVRPEQLHLTLAFLGEVAEVQLGQLTEAL 57 Query: 65 GRIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 G+IR FTL G + RV W+G+ +P L QLA +R+ G R Sbjct: 58 GQIRCQPFTLQFGRLGCFPDQRHPRVFWIGL-EPNPALQQLAQQVRAAVRACGITLEERL 116 Query: 122 FHPHITLLRDASEAVTIPPPGFNWS-----YAVTEFTLYASSFARGRTRYTPLKRWA 173 F PHITL R AV F L SS + ++ L+R+A Sbjct: 117 FSPHITLARLKEADPRQVAALLTQQPVLPEVAVDAFLLVQSSLSARGAQHRVLRRFA 173 >UniRef50_Q8TVM2 2'-5' RNA ligase n=1 Tax=Methanopyrus kandleri RepID=Q8TVM2_METKA Length = 188 Score = 154 bits (390), Expect = 1e-36, Method: Composition-based stats. Identities = 43/187 (22%), Positives = 73/187 (39%), Gaps = 16/187 (8%) Query: 1 MSEPQRLFFAIDL-PAEIREQIIHWRATHFPPEA-GRPVAADNLHLTLAFLGEVSAEKEK 58 MS R F +ID+ E+ +I+ + A + V +N+HLTL FLG++ + Sbjct: 1 MSRF-RAFISIDIEDEEVVNRIVEVQERLKASGADLKLVEPENVHLTLKFLGDIPESRVT 59 Query: 59 ALSLLAGRIR--QPGFTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARS 113 + + FT+ L G + RVVW+G+++ +A +L + R Sbjct: 60 DVVNAMEKAAETVEPFTMRLKGIGVFPNPNYVRVVWIGVQEGSDETKAMAAVLEQELGRM 119 Query: 114 GCFQSNRPFHPHITLLRDAS--------EAVTIPPPGFNWSYAVTEFTLYASSFARGRTR 165 G + + F PH+T+ R S EA+ V L S Sbjct: 120 GFRRERKDFVPHVTVARVRSGRNKGRLIEAIRELSNVEVGEVEVDRIRLKKSILRPQGPE 179 Query: 166 YTPLKRW 172 Y ++ Sbjct: 180 YHTVEEV 186 >UniRef50_A0B6Z0 2'-5' RNA ligase n=1 Tax=Methanosaeta thermophila PT RepID=A0B6Z0_METTP Length = 177 Score = 154 bits (390), Expect = 1e-36, Method: Composition-based stats. Identities = 40/178 (22%), Positives = 67/178 (37%), Gaps = 15/178 (8%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 R F A+DLP EI+ + + + V + +H+TL FLGEV + + Sbjct: 1 MRCFVAVDLPEEIKRGVPAIQQAF-AMNGLKLVDPNLVHITLKFLGEVEERRVDDIVNAL 59 Query: 65 GRIRQPGFTLTLDDAGQWLRS--RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 R+R F + G + RV+WLG P +LA + + G + + F Sbjct: 60 ARVRFSPFQARITGVGAFPGRSIRVIWLGATGPFE---ELARAVDTALEPFGFERDKK-F 115 Query: 123 HPHITLLRDASEAVTIPPPGF--------NWSYAVTEFTLYASSFARGRTRYTPLKRW 172 H TL R +++ ++ V F L S+ Y + + Sbjct: 116 SAHATLARVKDPSLSRILAERLSGVSEVDLGAFTVERFVLKKSTLTPRGPVYEDIAEF 173 >UniRef50_Q0BV79 2'-5' RNA ligase n=2 Tax=Acetobacteraceae RepID=Q0BV79_GRABC Length = 212 Score = 154 bits (389), Expect = 1e-36, Method: Composition-based stats. Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 13/181 (7%) Query: 4 PQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 P RLF +DLP +++++ + R ++ +N HLTL F+G+V + L L Sbjct: 36 PMRLFVGLDLPWILKDELYGIA---YGLPGARWISPENYHLTLRFIGDVPGHRADELDLA 92 Query: 64 AGRIRQPGFTLTLDDAGQWLRSR--VVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 +R GF+L L G + R+ +++G+ + P L L N + + R G R Sbjct: 93 LSTLRARGFSLVLTGIGIFERAGRSTLYVGVEKNP-QLDHLQNKIETGLQRVGLPPERRR 151 Query: 122 FHPHITLLRDASEAVTIPP-------PGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 F PH+TL R A V FTL++S + ++ YT +AL Sbjct: 152 FMPHVTLARLDGTADNRLASYVQSHNLFRTDPIPVEHFTLFSSQLGKEQSVYTVEADYAL 211 Query: 175 T 175 Sbjct: 212 A 212 >UniRef50_C7R810 2'-5' RNA ligase n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R810_KANKD Length = 183 Score = 154 bits (389), Expect = 1e-36, Method: Composition-based stats. Identities = 53/170 (31%), Positives = 77/170 (45%), Gaps = 6/170 (3%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLFFAIDLP + Q+ + P AGRPV+ N H+TL FLGE+ + + Sbjct: 3 RLFFAIDLPQAHKNQLELLQRQC--PFAGRPVSPHNFHITLLFLGELPDNQLGDILDAIE 60 Query: 66 RIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCF--QSNRPFH 123 F + L + ++ V L + P LI+L +R ++G N+PF Sbjct: 61 VPVIKPFEIKLKQFAYYPKAEVGCLEV-APNEQLIELHQHIRKNLKQAGIHIKLPNKPFR 119 Query: 124 PHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWA 173 PHITL RDA+ I ++ V F L S F + Y ++ W Sbjct: 120 PHITLYRDATVQSDISH-SVDFQLKVDHFCLMESQFNQKGVYYEVIEEWP 168 >UniRef50_Q47EL0 2',5' RNA ligase n=1 Tax=Dechloromonas aromatica RCB RepID=Q47EL0_DECAR Length = 193 Score = 154 bits (389), Expect = 2e-36, Method: Composition-based stats. Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 7/174 (4%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 R+FFA+ AE+ +++ GR + +HLTLAFLGEV + L ++A Sbjct: 17 RVFFALWPSAEVADRLADMAGKAVASFGGRATRRETIHLTLAFLGEVPESRLPELCVVAD 76 Query: 66 RIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQ--SNRPFH 123 ++ FT++LD G W + ++W G + P L +L LR A +G + F Sbjct: 77 GVQGQSFTMSLDRLGFWRHNHLLWAGSQAPVASLGELVGRLRHALANAGFKVDTEQQGFV 136 Query: 124 PHITLLRDASEAVTIP-----PPGFNWSYAVTEFTLYASSFARGRTRYTPLKRW 172 PH+TL+R + + P + ++ F L SS + + Y L+ + Sbjct: 137 PHVTLVRKIPASAGLLENQQFPSFESLAWRADRFVLVRSSLSPSGSEYLILREF 190 >UniRef50_B8FSV2 2'-5' RNA ligase n=2 Tax=Desulfitobacterium hafniense RepID=B8FSV2_DESHD Length = 188 Score = 153 bits (388), Expect = 2e-36, Method: Composition-based stats. Identities = 47/184 (25%), Positives = 74/184 (40%), Gaps = 12/184 (6%) Query: 3 EPQRLFFAIDLPAEIREQIIHWRATHFP-PEAGRPVAADNLHLTLAFLGEVSAEKEKALS 61 + R F ID E++++I + GR DN HLTL FL ++S ++ + Sbjct: 4 QNIRAFLGIDFTEEVKDEIHELQQNLKGYALKGRWKGRDNFHLTLKFLAQISFAQKAQID 63 Query: 62 LLAGRI--RQPGFTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARSGCF 116 + ++ F L L G + RV+WLG+ + L L + G Sbjct: 64 ESLQSLCRKEKPFNLELKGLGVFGGKESCRVLWLGLAGDMQDLRSLHKKVDQVLTPLGFP 123 Query: 117 QSNRPFHPHITLLRD---ASEAVTIPPPGFNWSYA---VTEFTLYASSFARGRTRYTPLK 170 RPF PHITL +D A I + + V L+ S + + YT L Sbjct: 124 PERRPFSPHITLGQDIVFAGGFEEIQAKVGGFEFTPTHVERIHLFKSEQVQFKRIYTKLA 183 Query: 171 RWAL 174 ++L Sbjct: 184 DYSL 187 >UniRef50_C8X1G4 2'-5' RNA ligase n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X1G4_DESRD Length = 194 Score = 153 bits (388), Expect = 2e-36, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 74/185 (40%), Gaps = 12/185 (6%) Query: 4 PQRLFFAIDLPAEIREQIIHWRATHFPPEAGR--PVAADNLHLTLAFLGEVSAEKEKALS 61 QRLF + LP ++ + R P R N HLTLAFLG+ + + + + Sbjct: 2 SQRLFIGLPLPQTYQQGLEALRDEWAPKLRSRLSWTRPGNWHLTLAFLGDTRSAEAERVR 61 Query: 62 LLAGRIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQS 118 + TL G + + RV+W+G++ + LA+ + S A G Sbjct: 62 QALEAVHSAPITLQAAGGGAFPPGKKPRVLWVGLQHGRQESAALADQIWSVLAPLGIQPP 121 Query: 119 NRPFHPHITLLRDASEAVTIPPPGFN-------WSYAVTEFTLYASSFARGRTRYTPLKR 171 RPF H+TL R E F S + EF L+ S YT ++R Sbjct: 122 GRPFRAHLTLARVKQERGDSWEALFRSLGEKQWPSCQIAEFVLWQSELTPKGPVYTAVQR 181 Query: 172 WALTQ 176 +AL Sbjct: 182 YALRD 186 >UniRef50_Q11D05 2'-5' RNA ligase n=26 Tax=Rhizobiales RepID=Q11D05_MESSB Length = 199 Score = 153 bits (386), Expect = 3e-36, Method: Composition-based stats. Identities = 46/180 (25%), Positives = 72/180 (40%), Gaps = 13/180 (7%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF A+++P R+ + R + +N HLTL F+G+V ++ Sbjct: 3 RLFTALEIP---RDAALSLSLLRGGLPGARWIDVENYHLTLRFIGDVEGHVADEIANALD 59 Query: 66 RIRQPGFTLTLDDAGQWL--RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 R+R+P F LTL G + + VW G+ P L L + R G R F Sbjct: 60 RVRRPSFLLTLSGVGAFGQKKPHSVWAGVAASPD-LQALQGEIERICQRLGLPAEQRKFT 118 Query: 124 PHITLLRDASEAV-------TIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ 176 PH+TL R + + + + V F L +S + G Y + W L + Sbjct: 119 PHVTLARLKNASPHEVASYLSARGNFAAMPFRVNRFVLMSSRDSVGGGPYVVEEAWPLLR 178 >UniRef50_A9A3X7 2'-5' RNA ligase n=1 Tax=Nitrosopumilus maritimus SCM1 RepID=A9A3X7_NITMS Length = 180 Score = 153 bits (386), Expect = 4e-36, Method: Composition-based stats. Identities = 44/179 (24%), Positives = 79/179 (44%), Gaps = 14/179 (7%) Query: 5 QRLFFAIDLPA-EIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 R F AI++ +I++ I ++ +P+ +D LH TL FLGE+S E+ + + Sbjct: 1 MRTFVAIEISENDIKKSIKDFQNKL--QINAKPINSDQLHFTLQFLGEISEEQVQKVIES 58 Query: 64 AGRIRQPGFTLTLDDAGQWLR---SRVVWLGM-RQPPRGLIQLANMLRSQAARSGCFQSN 119 I+ FT+ L G + + RV+W+G + + LI+LA + + G S+ Sbjct: 59 LQTIKFSEFTINLKGIGAFPKPKFPRVIWIGTDEEGGKNLIELAKKVENVLKPLGL-VSD 117 Query: 120 RPFHPHITLLRDASEAVTIPPPGFNWSY------AVTEFTLYASSFARGRTRYTPLKRW 172 +PF PHIT+ R + + + ++ L S Y+ L+ Sbjct: 118 KPFKPHITIFRIKKKIGDMTEELNKQKFMDFGMQKISRIMLKKSELTSDGPIYSNLEEV 176 >UniRef50_A1HSF5 2'-5' RNA ligase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSF5_9FIRM Length = 182 Score = 153 bits (386), Expect = 4e-36, Method: Composition-based stats. Identities = 49/182 (26%), Positives = 79/182 (43%), Gaps = 12/182 (6%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFP-PEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 RLF I+ P +I +++ + +GR A N+HLTL FLGEV+ +K + Sbjct: 1 MRLFIGIEFPEDILDKLGQTQDYLRRYVSSGRFTAKHNMHLTLQFLGEVAEDKVGDICRC 60 Query: 64 AGRIR--QPGFTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQS 118 ++ L L G + ++ RVVW+G+ L +L + G Sbjct: 61 LQQVAKEHSPLRLALGALGCFGQNNPYRVVWVGLGGDLTALNRLQRAIVLGMKDLGFIPE 120 Query: 119 NRPFHPHITLLRDA------SEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRW 172 NRP+ PHITL RD + + S++V F+L +S+ + Y L + Sbjct: 121 NRPYKPHITLARDVWFTDAQAYQQALRLTAGGTSFSVKSFSLISSAVEEKKRVYRSLATF 180 Query: 173 AL 174 L Sbjct: 181 EL 182 >UniRef50_A1S9X0 Putative 2'-5' RNA ligase n=1 Tax=Shewanella amazonensis SB2B RepID=A1S9X0_SHEAM Length = 175 Score = 152 bits (385), Expect = 4e-36, Method: Composition-based stats. Identities = 55/174 (31%), Positives = 72/174 (41%), Gaps = 2/174 (1%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL 60 MS+ QRLF L + E I+ + P G+ V NLH+TLAFLG+ S + + L Sbjct: 1 MSDAQRLFLGFALSDQEGESILKLQKRLGAP--GKTVEKANLHMTLAFLGQTSQRQCQRL 58 Query: 61 SLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 I P F LD W + VV L + GL L + +S G QS Sbjct: 59 EAALEGITMPKFEQRLDSLVHWRGAGVVCLWGQATDSGLTDLYHGCQSLCQNLGLHQSEH 118 Query: 121 PFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 F+PHITL R A + LY S+ RY L+ W L Sbjct: 119 DFNPHITLFRKAKQFSIPEWQPEPVILRPERLNLYLSNSTPAGVRYEVLQSWPL 172 >UniRef50_A0LLA5 2'-5' RNA ligase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LLA5_SYNFM Length = 190 Score = 152 bits (385), Expect = 4e-36, Method: Composition-based stats. Identities = 50/185 (27%), Positives = 76/185 (41%), Gaps = 14/185 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEA-GRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 R F A+DLP+ ++ + + +A + D +HLTL FLG V+ E+ AL Sbjct: 2 IRTFIAVDLPSPVQAVLERFERELRKADATVAWIRPDRIHLTLKFLGNVAPERIPALREA 61 Query: 64 AGRIRQ--PGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQS 118 + + F L G + + RV+W+G+R L L + + G Sbjct: 62 LESVSRTVSPFRLQAAGCGAFPTIRQMRVIWVGLRGDADRLGDLKQKIEAATVPLGFESE 121 Query: 119 NRPFHPHITLLRDA--------SEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLK 170 +RPF PH+TL R E + ++ V E LY S +YTPL Sbjct: 122 DRPFKPHLTLGRVKGRGRLSVLQEILMANQSFEAEAFDVAEVVLYKSDLKPDGAQYTPLF 181 Query: 171 RWALT 175 R T Sbjct: 182 RAPFT 186 >UniRef50_B8GQV2 2'-5' RNA ligase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GQV2_THISH Length = 188 Score = 152 bits (385), Expect = 5e-36, Method: Composition-based stats. Identities = 64/172 (37%), Positives = 79/172 (45%), Gaps = 6/172 (3%) Query: 4 PQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 PQRLFFA+ E R + WR P GRP AA NLHLTLAF G+V AE L Sbjct: 8 PQRLFFALWPSDEARAALAGWRDAL-PRPGGRPTAARNLHLTLAFAGDVDAETRTCLEQA 66 Query: 64 AGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 A R+R F+L LD G + R ++W G P L LA L G PFH Sbjct: 67 AARVRGEPFSLPLDRLGVFKR-GLLWTGPADCPAALSTLAGDLAGVLRDCGVRPDPCPFH 125 Query: 124 PHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALT 175 HITL+R + + P ++ F L S +G Y LK + L Sbjct: 126 AHITLIRRMNGRLPGVDPP-GLTWQAKAFCLVRSRPGQG---YEVLKTYPLQ 173 >UniRef50_A1U2M3 2'-5' RNA ligase n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1U2M3_MARAV Length = 178 Score = 152 bits (384), Expect = 5e-36, Method: Composition-based stats. Identities = 52/179 (29%), Positives = 81/179 (45%), Gaps = 13/179 (7%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLFF +++P I+ ++ + R + LHLTLAFLGEV AE+ A Sbjct: 3 RLFFGLEIPESIKTSLLKVKTDIK---GARWQSKTQLHLTLAFLGEVEAEQVIQARDNAR 59 Query: 66 RIRQPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 ++ F L G + + +++W G+ P L L L + G N F Sbjct: 60 KVTHTPFKLEAAGLGCFGKEESPKILWAGVS-PEAELRGLQRTLAQRLINDGFTLQNPSF 118 Query: 123 HPHITLLRDASEAVTIPPPGFNW------SYAVTEFTLYASSFARGRTRYTPLKRWALT 175 PHITL R + A ++ ++ S+ V F L+ SS + + YT L+R+ LT Sbjct: 119 KPHITLSRFRAGAGSVAGLIEHYQRTRFGSWPVQGFALFESSPGQSGSVYTVLERYPLT 177 >UniRef50_Q0AKK0 2'-5' RNA ligase n=1 Tax=Maricaulis maris MCS10 RepID=Q0AKK0_MARMM Length = 179 Score = 152 bits (384), Expect = 5e-36, Method: Composition-based stats. Identities = 48/181 (26%), Positives = 71/181 (39%), Gaps = 14/181 (7%) Query: 4 PQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 RLF A+ +P + +I + R +N H+TL F G V + + L Sbjct: 2 TLRLFAALPVPDSLHAEIARLQK---GVPGARWRPRENFHITLRFFGTVDERQAEDLDAE 58 Query: 64 AGRIRQPGFTLTLDDAGQWLR--SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 I P F L L +G + + R +WLG+R P L +L A R +R Sbjct: 59 LAHIAMPPFDLALLGSGWFGKLDPRALWLGVR-PSEALSELNEKCERAARRCKLEPEHRN 117 Query: 122 FHPHITLLR-------DASEAVTIPPPGFNWSYAVTEFTLYASSFARGRT-RYTPLKRWA 173 FHPH+TL + + T FTLY+S +RG + Y + Sbjct: 118 FHPHMTLAYLQGTPIDRLTRFAERTGGFATEPWRATHFTLYSSWTSRGESNIYEAEADYP 177 Query: 174 L 174 L Sbjct: 178 L 178 >UniRef50_C6BS46 2'-5' RNA ligase n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BS46_DESAD Length = 184 Score = 152 bits (384), Expect = 5e-36, Method: Composition-based stats. Identities = 40/182 (21%), Positives = 71/182 (39%), Gaps = 12/182 (6%) Query: 3 EPQRLFFAIDLPAEIREQIIHWRATHFPPEAGR--PVAADNLHLTLAFLGEVSAEKEKAL 60 + R F A +P E +E I + + V +N+H TL FLG + K + Sbjct: 2 KKIRTFIAHPVPEEWKEIIGEAYGSLREGLESKIAWVKPENMHFTLKFLGPIEESKLAEV 61 Query: 61 SLLAGRIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQ 117 + I F ++ AG + + V+W+G+ Q + A + S+ A+ + Sbjct: 62 QEVLKNIPVVNFKISTAGAGFFPALEKPHVIWIGLEQGAKEFCSTAATIESEMAKLDFKE 121 Query: 118 SNRPFHPHITLLRDAS----EAVTIPPPGFNWSYA---VTEFTLYASSFARGRTRYTPLK 170 + + H H+TL R + + + V FTLY S Y+ +K Sbjct: 122 NRKSCHAHLTLGRVKKIAEDDWTVLAEKINSIKLPETEVNGFTLYKSVLTPDGPIYSVIK 181 Query: 171 RW 172 + Sbjct: 182 EY 183 >UniRef50_A8ZY65 2'-5' RNA ligase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZY65_DESOH Length = 193 Score = 152 bits (384), Expect = 6e-36, Method: Composition-based stats. Identities = 44/186 (23%), Positives = 69/186 (37%), Gaps = 14/186 (7%) Query: 3 EPQRLFFAIDLPAEIREQIIHWRATHFPPE-AGRPVAADNLHLTLAFLGEVSAEKEKALS 61 R F A DLPAE+ + + + T VA N+HLT+ FLGE+S E + Sbjct: 6 SKIRCFMAFDLPAEVIDDLAGIQKTVAAGGVKIGWVAPQNIHLTVKFLGEISPEAVQKAL 65 Query: 62 LLAGRIRQ--PGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCF 116 A + + + G + R RV+W G+ R L+ +L +G Sbjct: 66 AAAEQAVKGISPMQIRAQGIGVFPDMNRPRVLWAGLSGDLRSLVDFHGILDENLFSAGFG 125 Query: 117 QSNRPFHPHITLLRDASEAVTIPPP--------GFNWSYAVTEFTLYASSFARGRTRYTP 168 + R F H+TL R + + + +Y S Y+ Sbjct: 126 KEKRRFTAHVTLGRIKRAVDVRQLAAAMAPCLDFQSKPFCIDRLMVYKSDLTAAGPVYSR 185 Query: 169 LKRWAL 174 L +AL Sbjct: 186 LAAFAL 191 >UniRef50_C9R942 2'-5' RNA ligase n=1 Tax=Ammonifex degensii KC4 RepID=C9R942_AMMDK Length = 188 Score = 151 bits (383), Expect = 7e-36, Method: Composition-based stats. Identities = 48/187 (25%), Positives = 78/187 (41%), Gaps = 13/187 (6%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHF-PPEAGRPVAADNLHLTLAFLGEVSAEKEKA 59 M E RLF+A+ LPA +R Q++ + P + + V +NLHLT+ FLG+ A + Sbjct: 1 MQEKWRLFWAVPLPASLRRQLVEVQRELGFSPRSVKWVEEENLHLTVRFLGDTEAGQVDP 60 Query: 60 LSLLAGR--IRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSG 114 L F+L ++ G + RV+W+G++ L L + G Sbjct: 61 LREAVAARLTSIKAFSLEVEKLGAFPSLKHPRVIWVGVKA-HPSLFLLYQAVEEAVRGLG 119 Query: 115 CFQSNRPFHPHITLLRDASE---AVTIPPPGFNWSYA---VTEFTLYASSFARGRTRYTP 168 + +PF PHITL R ++++ V E LY S Y+ Sbjct: 120 FAPATQPFSPHITLGRVRERAVVPGDHRWAERSYTFTPFLVDELVLYRSFLTPRGPIYSR 179 Query: 169 LKRWALT 175 + L+ Sbjct: 180 VAAVRLS 186 >UniRef50_Q12W73 2'-5' RNA ligase n=4 Tax=Methanosarcinaceae RepID=Q12W73_METBU Length = 183 Score = 151 bits (383), Expect = 7e-36, Method: Composition-based stats. Identities = 43/184 (23%), Positives = 67/184 (36%), Gaps = 17/184 (9%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF A+DLP+ IR ++I + F + V+ + +H+TL FLGEVS + ++ Sbjct: 3 RLFIAVDLPSSIRRELIDVL-SLFEGFKLKIVSPELIHITLKFLGEVSDDMVPDIASSLD 61 Query: 66 RIRQPGFTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 I F + G + RVVWLG +L + + ++ + R F Sbjct: 62 GIECMPFNANIKGVGVFSNLRSPRVVWLGAEGN---FKKLHEEVETSLSKLRFDKDKREF 118 Query: 123 HPHITLLRDASEAVTIPPPGFNW----------SYAVTEFTLYASSFARGRTRYTPLKRW 172 H TL R V + L S+ Y + Sbjct: 119 AAHATLARIKFMPKEQMKGLLYVLDKLKDVDLGEIRVDKVLLKKSTLTPDGPVYETIHEV 178 Query: 173 ALTQ 176 L Q Sbjct: 179 LLGQ 182 >UniRef50_C6P1X6 2'-5' RNA ligase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1X6_9PROT Length = 183 Score = 151 bits (383), Expect = 8e-36, Method: Composition-based stats. Identities = 49/171 (28%), Positives = 72/171 (42%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLFFA+ R + W+ GR + D LH TL F+G V+ + + L L A Sbjct: 10 LRLFFALWPNTVERTALAAWQPPLRESCGGRAMLPDTLHTTLVFVGNVAEHRLETLRLAA 69 Query: 65 GRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHP 124 + GF L L +A W + +V+ + P L L L + RP+ P Sbjct: 70 QEVSGRGFGLDLTEAHYWGHNHIVYAAPQTVPVQLADLVIDLEHSLRKHRFHFEQRPYKP 129 Query: 125 HITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALT 175 H+TLLR+A + P + + +F L S RY L R+ L Sbjct: 130 HVTLLRNAQWSEASLPAMRTVRWRIEDFVLVHSLSDEQGARYEVLARFPLQ 180 >UniRef50_A9WCY3 2'-5' RNA ligase n=3 Tax=Chloroflexus RepID=A9WCY3_CHLAA Length = 190 Score = 151 bits (382), Expect = 1e-35, Method: Composition-based stats. Identities = 49/181 (27%), Positives = 69/181 (38%), Gaps = 14/181 (7%) Query: 4 PQRLFFAIDLPAEIREQIIHWRATH-FPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSL 62 RLF A++LP +R+++ + A R +HLTL FLGE + L Sbjct: 10 TLRLFIALELPQPVRDELKRIQQRLQGHSRAARWTDPTGMHLTLHFLGETPERLVEPLLT 69 Query: 63 LAGRIRQPGFTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 + P +LTLD G + + RVVW+G+R L L L + G Sbjct: 70 GLRSVSAPALSLTLDRLGCFPANGALRVVWVGLRGDLAALATLHRSLATVIQSLGLPTET 129 Query: 120 RPFHPHITLLRDASEAVTIPP----------PGFNWSYAVTEFTLYASSFARGRTRYTPL 169 RPF PHITL R A + ++ L+ S YT L Sbjct: 130 RPFVPHITLARARPNATAADLRALRTALDTVAPQSLTWQSDSPRLFRSQLTPRGAVYTVL 189 Query: 170 K 170 Sbjct: 190 G 190 >UniRef50_O66967 UPF0097 protein aq_768 n=2 Tax=Aquificaceae RepID=Y768_AQUAE Length = 188 Score = 151 bits (382), Expect = 1e-35, Method: Composition-based stats. Identities = 39/182 (21%), Positives = 68/182 (37%), Gaps = 13/182 (7%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 R F I E + G+ V N+H+TL FLG+++ + + Sbjct: 5 RAFVGFFTSKSINEVAERIKKEVDLKIMGKWVEPQNVHMTLQFLGDITEAQAIEVIKNLQ 64 Query: 66 RIRQP--GFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN- 119 I + F + G + R RV+W+G+ + L LA + A+ G N Sbjct: 65 EISKKNIPFRIKYKGLGVFPDVKRPRVLWIGVSEGANKLTNLAKEVARLNAKKGIIPKNS 124 Query: 120 RPFHPHITLLR----DASEAVTIPPPGFNWSY---AVTEFTLYASSFARGRTRYTPLKRW 172 + F PH+T+ R D + + V + L +S+ YT ++ + Sbjct: 125 KNFVPHVTICRIKSYDRKTLNELLRKYRTVEFGEDEVNKIALISSTLTSVGPIYTVVEEF 184 Query: 173 AL 174 L Sbjct: 185 YL 186 >UniRef50_A8UTL9 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UTL9_9AQUI Length = 187 Score = 151 bits (381), Expect = 1e-35, Method: Composition-based stats. Identities = 40/184 (21%), Positives = 75/184 (40%), Gaps = 12/184 (6%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 R F I E + + G+ V N+H+T FLG++S + ++ Sbjct: 1 MRAFVGFFTTKGIYEHVEKLKEETKSYLKGKWVEPQNMHMTFQFLGDISQSQAVSVLKNL 60 Query: 65 GRIR--QPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 I F + G + R R++W+G+ + L +LAN + ++G Sbjct: 61 QSIAEKHAPFKVQYRSLGVFPDRRRPRILWVGVSRGENRLKRLANEVAQLNKKAGIRVDA 120 Query: 120 RPFHPHITLLR----DASEAVTIPPPGFNWSY---AVTEFTLYASSFARGRTRYTPLKRW 172 +PFHPH+T+ R D + ++ N+++ V L +SS YT ++ + Sbjct: 121 KPFHPHVTVCRIKEADRKKLGSLMNRYRNFNFGEETVDRIALISSSLTSIGPIYTVVEEF 180 Query: 173 ALTQ 176 + Sbjct: 181 YFRR 184 >UniRef50_A3DCR1 2'-5' RNA ligase n=3 Tax=Clostridium thermocellum RepID=A3DCR1_CLOTH Length = 183 Score = 151 bits (381), Expect = 1e-35, Method: Composition-based stats. Identities = 42/183 (22%), Positives = 72/183 (39%), Gaps = 12/183 (6%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPE-AGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 R F A+D E++++I+ + +GR +N HLTL FLGE+ K + + Sbjct: 1 MRTFVAVDFNTELKKEILKLQTQLRNLAVSGRWKYINNFHLTLKFLGEIEKSKVQDIKKG 60 Query: 64 AGRI--RQPGFTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQS 118 + + F L +D + + RV+WL + L L + + + G + Sbjct: 61 LDEVCGKTQKFCLNIDGLDFFPGNGCLRVLWLKLAGELESLHSLQSEIDIMLEKLGFEKE 120 Query: 119 NRPFHPHITLLRDASEAVTIPPP------GFNWSYAVTEFTLYASSFARGRTRYTPLKRW 172 R + PH+T+ +D + V L+ S G+ YTPL Sbjct: 121 KRRYVPHVTIAQDVVFNKDFEEIKGLVGNYRFATIEVQSVNLFKSEQIGGKRVYTPLTEH 180 Query: 173 ALT 175 L Sbjct: 181 KLV 183 >UniRef50_Q74MW1 NEQ502 n=1 Tax=Nanoarchaeum equitans RepID=Q74MW1_NANEQ Length = 172 Score = 150 bits (380), Expect = 2e-35, Method: Composition-based stats. Identities = 44/177 (24%), Positives = 65/177 (36%), Gaps = 19/177 (10%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 R+F AIDLP E++ QI + G+ V +NLH+TL F+GEV L Sbjct: 1 MRVFLAIDLPEELKNQIYSYYKKVSKAVYGKFVEKENLHITLKFIGEVLD--INPLIERL 58 Query: 65 GRIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 ++ F + + + RVVW+G L LAN + Sbjct: 59 NYVKFKPFEVKVKGLSAFPSIENPRVVWVG--AHSVYLNDLANQINRVLKSY------EN 110 Query: 122 FHPHITLLRDASEAVTIPPPGFN------WSYAVTEFTLYASSFARGRTRYTPLKRW 172 F HIT++R + + V F LY S+ Y L + Sbjct: 111 FVGHITIVRVKRVLDKKYLLELAKKFDLEYKFVVDRFYLYKSTLTPNGPIYEKLYEF 167 >UniRef50_D2MH67 2'-5' RNA ligase n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MH67_9BACT Length = 190 Score = 150 bits (379), Expect = 2e-35, Method: Composition-based stats. Identities = 45/187 (24%), Positives = 69/187 (36%), Gaps = 16/187 (8%) Query: 5 QRLFFAIDLPAEIREQIIH-WRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 R F AIDLP+ ++ I R +NLHL L FLG+ + + + L+ Sbjct: 3 LRTFLAIDLPSTLQSAIGENIRPVQRELPGLSWSKHENLHLNLKFLGDTAESQVDRIRLV 62 Query: 64 AGRI--RQPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQS 118 F + + G + RV+W+G+ L LA + G Q Sbjct: 63 VEPAISHVSPFVIACEGFGVFPNDRSPRVLWIGLGGDLDSLAALAECIDRAVVPLGFPQE 122 Query: 119 NRPFHPHITLLRDASEAVT----------IPPPGFNWSYAVTEFTLYASSFARGRTRYTP 168 +RPF PH+T+ R + P S V +L+ S + YT Sbjct: 123 DRPFRPHLTVGRVKKDHREVGRVMSTLDVFTAPFPCGSLPVERVSLFKSDLRQTGPIYTK 182 Query: 169 LKRWALT 175 L +L Sbjct: 183 LWDISLN 189 >UniRef50_B9JCJ4 2'-5' RNA ligase n=44 Tax=Rhizobiales RepID=B9JCJ4_AGRRK Length = 213 Score = 150 bits (379), Expect = 2e-35, Method: Composition-based stats. Identities = 44/180 (24%), Positives = 70/180 (38%), Gaps = 13/180 (7%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF A+++P + R R + +N H+TL F+G+V + Sbjct: 18 RLFTALEIPRNAAMSLSLLRGGL---PGARWIDVENYHITLRFIGDVDGRTADEIVDRLD 74 Query: 66 RIRQPGFTLTLDDAGQWL--RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 RI +P F L L+ G + + VW G+ Q P + L + R G R F Sbjct: 75 RIDRPEFQLRLEGIGSFGSKKPHSVWAGVTQTPD-MYALQGEIERICQRIGLPPDPRKFT 133 Query: 124 PHITLLRDASEA-------VTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ 176 PH+TL R S ++ + V F L +S + G Y + + L + Sbjct: 134 PHVTLARLKSSRVDDVVHYLSGRGDFHTSPFTVGRFVLLSSRESVGGGPYLTEEVFPLHE 193 >UniRef50_Q2FTJ3 2',5' RNA ligase n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FTJ3_METHJ Length = 183 Score = 149 bits (378), Expect = 3e-35, Method: Composition-based stats. Identities = 52/180 (28%), Positives = 73/180 (40%), Gaps = 10/180 (5%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEA-GRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF AIDLP EIREQ + A V +++H+TL F+GEVS ++ + Sbjct: 3 RLFVAIDLPDEIREQFRDVQDGLRSSRARLTLVDQESMHITLKFIGEVSGSALSQITEIL 62 Query: 65 GRIRQPGFTLTLD--DAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 I F++ + RVVW + P LA + S A G R F Sbjct: 63 QTIEASPFSMEVGLIGTNSQRAPRVVWAEV-DDPGQCRALAESIDSSLASLGFEPEKRKF 121 Query: 123 HPHITLLRDAS------EAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ 176 PHIT+ R EA+ + + V EF L S YT + +L + Sbjct: 122 RPHITIARVRQFHQSLFEALAGVASSCSGTIPVREFILKKSELTPDGPIYTDILHVSLRE 181 >UniRef50_C4L922 2'-5' RNA ligase n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L922_TOLAT Length = 178 Score = 149 bits (378), Expect = 3e-35, Method: Composition-based stats. Identities = 59/171 (34%), Positives = 78/171 (45%), Gaps = 4/171 (2%) Query: 4 PQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 +RLFFA+ + + H + +PV A+N HLTL FLG L + Sbjct: 2 QRRLFFAL-PAQSVASALHHCQQQLHEEGHRKPVNANNFHLTLHFLGMQDEHILPQLYQV 60 Query: 64 AGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 A +R P F LTLD G + + +WLG + P L+ L N L + G S + Sbjct: 61 AAELRSPPFELTLDQYGLFRHAHCLWLGPQHPAPPLLHLVNRLGESLTQLGLPVST-DYR 119 Query: 124 PHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 PHITL R+A P P V+EF LY S A Y PL+RW L Sbjct: 120 PHITLFRNARAMTQCPAPALRLQ--VSEFILYESISAADGVWYKPLRRWPL 168 >UniRef50_D2LH53 2'-5' RNA ligase n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LH53_RHOVA Length = 202 Score = 149 bits (376), Expect = 4e-35, Method: Composition-based stats. Identities = 39/176 (22%), Positives = 72/176 (40%), Gaps = 13/176 (7%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF ++LP ++ + RA + A+N H+TL F+G+++ + + Sbjct: 3 RLFTGLELPHDVVGHLSGLRAGL---SGASWIDAENYHITLRFVGDITDAQANDFADALA 59 Query: 66 RIRQPGFTLTLDDAGQWL--RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 IR F + + G + + R +W G++ L L A +G R F Sbjct: 60 DIRFESFDIAVSGLGSFGGHKPRSLWAGVKA-SPALETLQKAHERAARAAGLPPEPRNFT 118 Query: 124 PHITLLR-------DASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRW 172 PH+TL R A++ + + V+ F L++S +G Y + + Sbjct: 119 PHVTLARLRNVSPFAAADYLARHGGFACEPFTVSRFVLFSSRPNQGGGPYVVEEAY 174 >UniRef50_Q15YM1 2'-5' RNA ligase n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15YM1_PSEA6 Length = 176 Score = 149 bits (376), Expect = 5e-35, Method: Composition-based stats. Identities = 54/172 (31%), Positives = 79/172 (45%), Gaps = 2/172 (1%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 R FFA+ P + I WR FP PV A N H+TLAFLG ++ + +LS Sbjct: 1 MRAFFALTPPGTTKLAIETWRDKAFPQ-FYSPVKASNFHITLAFLGNINESQLDSLSQYI 59 Query: 65 GR-IRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 + F LTLD G W + + +WLG Q + + L +L+ + G R + Sbjct: 60 DAHLNTQCFLLTLDYVGYWSKPKALWLGNTQVSKEQLDLVALLQKASPACGITMQKRDYI 119 Query: 124 PHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALT 175 H+TL R SE N+++ TE TLY S+ + Y P+ W + Sbjct: 120 SHLTLARKCSENPPAALIEPNFAFQATELTLYESASSAHGVTYRPILTWPFS 171 >UniRef50_A5V4K1 2'-5' RNA ligase n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V4K1_SPHWW Length = 177 Score = 149 bits (376), Expect = 5e-35, Method: Composition-based stats. Identities = 49/179 (27%), Positives = 72/179 (40%), Gaps = 13/179 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF A+ P +RE ++ A R LHLTL F+GEV + ++ Sbjct: 2 HRLFIALRPPLPMREALL---AAMGDIPGARWQDDAQLHLTLRFVGEVDRHVAEDIAAAL 58 Query: 65 GRIRQPGFTLTLDDAGQW-LRSRV--VWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 G + P F L LD G + R R+ +W G+ P + + L + + R+G R Sbjct: 59 GAVSHPAFALRLDGVGCFDRRGRIDNIWAGVT-PHQPVKSLHAAVTAALVRAGIAPEERA 117 Query: 122 FHPHITLLRDASEAVTIPPPGFNWSYAV------TEFTLYASSFARGRTRYTPLKRWAL 174 F PHITL R A + + F LY S Y+ + R+ L Sbjct: 118 FVPHITLARFARGQAPSGTLPMDSLWPAPVEGRFDHFLLYESHLGASGASYSAIARYRL 176 >UniRef50_C6J532 2'-5' RNA ligase n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J532_9BACL Length = 188 Score = 148 bits (375), Expect = 6e-35, Method: Composition-based stats. Identities = 47/185 (25%), Positives = 73/185 (39%), Gaps = 12/185 (6%) Query: 2 SEPQRLFFAIDLPAEIREQIIHWRATHF-PPEAGRPVAADNLHLTLAFLGEVSAEKEKAL 60 E RLF AI LP E++ ++ W + + + V A++ H+T+ FLG+ + + L Sbjct: 5 EEKWRLFIAIPLPQEVKYKLEEWCSEQKTRLDFKKWVHAEDYHITVQFLGDTAPGRLDEL 64 Query: 61 SLLAGRIRQP--GFTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARSGC 115 R + L G + R V+W G+R GL L + + S+ G Sbjct: 65 LASLSRAAKGMGPLELEAAGIGTFGRPASPSVLWAGVRGEVAGLESLHSRVTSENRALGF 124 Query: 116 FQSNRPFHPHITLLRDASEAVTIPPP-----GFNWSYAVTEFTLYASSFARGRTRYTPLK 170 R F PHITL R E + P S+ +Y + R Y + Sbjct: 125 VPEERRFSPHITLARKYREGARLDPAALQTQPEFGSWRADRLVIYRTHM-HKRPMYEVVG 183 Query: 171 RWALT 175 LT Sbjct: 184 SALLT 188 >UniRef50_B3T3P3 Putative 2',5' RNA ligase family protein n=2 Tax=environmental samples RepID=B3T3P3_9ARCH Length = 179 Score = 148 bits (374), Expect = 7e-35, Method: Composition-based stats. Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 13/175 (7%) Query: 5 QRLFFAIDLPA-EIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 R F AI++ ++ I + +PV N+H T+ FLGEVS E +S Sbjct: 1 MRTFVAIEVSDKDVLNSIHKIQTELN--IKAKPVELHNMHFTVQFLGEVSEEMIGKISDT 58 Query: 64 AGRIRQPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 I F++T G + + RV+W+G+ L +LA M+RS+ + + Sbjct: 59 LNSIEFSAFSITFASIGVFPKPNSPRVIWIGVTNGINELEKLAEMIRSKLSDIDFSPDKK 118 Query: 121 PFHPHITLLRDASEAVTIPPPGFNWS------YAVTEFTLYASSFARGRTRYTPL 169 F PH+T+ R ++ +P +S ++E L S YT L Sbjct: 119 -FKPHVTIFRVKNKIEDLPSKLEKFSSCSFGKQLISEIKLKKSELTYQGPIYTDL 172 >UniRef50_Q3AEX2 Putative 2'-5' RNA ligase n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AEX2_CARHZ Length = 177 Score = 148 bits (374), Expect = 7e-35, Method: Composition-based stats. Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 7/173 (4%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLFFA+D P E++E+I F + VA +N HLTLAFLGE ++ + A Sbjct: 1 MRLFFAVDFPEELKEKIHQDITPLFKYNGVKWVAKENYHLTLAFLGEKEEKELLQIDRAA 60 Query: 65 GRIRQPGFTL-TLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 + Q +L + D G + R +V++L + GL+ LA LR + + Sbjct: 61 KSVPQVKESLIKVLDFGAFPNLKRPKVLFLKIE--SPGLLTLAENLRQNLKENNISFDEK 118 Query: 121 PFHPHITLLRDASEAVTIP-PPGFNWSYAVTEFTLYASSFARGRTRYTPLKRW 172 PF PH+T+ R E + P ++ F L S Y +K + Sbjct: 119 PFVPHLTIGRVKGEIKNLALPKFNPKEFSFKNFYLIKSILTPEGPIYEKIKSY 171 >UniRef50_Q0W551 2'-5' RNA ligase n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W551_UNCMA Length = 180 Score = 148 bits (374), Expect = 8e-35, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 67/184 (36%), Gaps = 19/184 (10%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 R F A++L I+E+I + + V + +H+TL FLG V ++ A++ Sbjct: 2 IRTFIAVNLDPAIKEKIAEAVGDF-NMKGLKTVEPELVHITLKFLGNVEEDRIDAIADAL 60 Query: 65 GR-IRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 + FT T G + RV+W+G P L + A G + R Sbjct: 61 KEGVTVEPFTATFRSIGGFPGTKNPRVIWIGAEGPFEALN---KQVEDALAGIGFEREGR 117 Query: 121 PFHPHITLLRDASEAVTIPPP----------GFNWSYAVTEFTLYASSFARGRTRYTPLK 170 F+ H+T+ R + + V + S+ + +Y ++ Sbjct: 118 -FNAHVTIGRIKFSTPEQKQRLPLLFEKYRDFYAGTQPVDRIHVMKSTLSPKGPKYEAIR 176 Query: 171 RWAL 174 L Sbjct: 177 EILL 180 >UniRef50_UPI000178815C 2''''-5'''' RNA ligase n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178815C Length = 185 Score = 148 bits (374), Expect = 9e-35, Method: Composition-based stats. Identities = 45/181 (24%), Positives = 73/181 (40%), Gaps = 12/181 (6%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGR-PVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF A+ LP+E+ +I W T + V + H+TL FLG+ + + L+ Sbjct: 3 RLFVAVRLPSEVSSRIQDWTETLRKHANFKKWVHPQDYHITLQFLGDTPSHRIAELTGAL 62 Query: 65 GRIRQP--GFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 + + F L+L DAG + R++W G+ L +L + S+ G Sbjct: 63 QEVAKERKPFKLSLYDAGVFGASGSPRILWAGVGGDLNALAELQQSVVSRMESFGFVPEE 122 Query: 120 RPFHPHITLLRDASEAVTIPP-----PGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 RPF PHIT+ R T + V E L+ ++ Y + L Sbjct: 123 RPFRPHITVGRKFQGNQTFSLDVIGKGPEPIQWDVLEMVLFRTNLQAS-PMYETVGVARL 181 Query: 175 T 175 + Sbjct: 182 S 182 >UniRef50_D1YUN2 2'-5' RNA ligase n=1 Tax=Methanocella paludicola SANAE RepID=D1YUN2_METPS Length = 181 Score = 148 bits (374), Expect = 9e-35, Method: Composition-based stats. Identities = 36/185 (19%), Positives = 62/185 (33%), Gaps = 18/185 (9%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 R F +++L IR++I + + V +H+TL FLG + K + Sbjct: 2 IRAFISVNLTPGIRQKIGEAERDF-DMKGIKLVEPSLIHVTLKFLGNIEEAKVGEIEAAL 60 Query: 65 GRIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 ++ F + G + RV+W+G +L + + G + R Sbjct: 61 KKVSVRPFKARMRSLGGFPNPRNPRVIWVGAEGD---FAELNKQVEALMEEIGFPREGR- 116 Query: 122 FHPHITLLRDASEAVTIPPPGFNW----------SYAVTEFTLYASSFARGRTRYTPLKR 171 F PH+T+ R V L S+ + RY LK Sbjct: 117 FQPHVTIGRVKFPTPEQKQDLPGLFEKYKDFDAGEMTVDSIHLMKSTLSPKGPRYDVLKE 176 Query: 172 WALTQ 176 L + Sbjct: 177 IPLAR 181 >UniRef50_A7HSX7 2'-5' RNA ligase n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HSX7_PARL1 Length = 183 Score = 147 bits (373), Expect = 1e-34, Method: Composition-based stats. Identities = 39/178 (21%), Positives = 71/178 (39%), Gaps = 13/178 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF A+++P E E+++ + R + + H+TL F+G+V + Sbjct: 2 IRLFTALEIPDEAAEKLMRLQQGLD---GARWIERPDFHITLRFMGDVPENVAADIDEAL 58 Query: 65 GRIRQPGFTLTLDDAGQWL--RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 I F + L+ G++ R +W G++ L L S R G R + Sbjct: 59 AEIPMEPFEVELEGVGEFGGKRPHTLWAGVKM-SEPLRVLQGRHESAMRRVGLKPETRNY 117 Query: 123 HPHITLLR-------DASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWA 173 PH+T+ R +A + + V +FTL+++ + G Y R+ Sbjct: 118 TPHVTIARLSHVSTDEAYRFIEANNLFAAPRFEVEQFTLFSAKASTGGGPYVVKTRYP 175 >UniRef50_C8W3K6 2'-5' RNA ligase n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W3K6_DESAS Length = 189 Score = 147 bits (373), Expect = 1e-34, Method: Composition-based stats. Identities = 42/188 (22%), Positives = 73/188 (38%), Gaps = 16/188 (8%) Query: 3 EPQRLFFAIDLPAEIREQIIHWRATHFP-PEAGRPVAADNLHLTLAFLGEVSAEKEKA-L 60 +P RLF+A++L +E++ +I ++ + V +N HLT+ FLG+ E + Sbjct: 2 QPIRLFWAVNLSSELKAKIAVLQSQLKKCGADVKWVDEENFHLTVKFLGDTEPEIVPVMV 61 Query: 61 SLLAGRIRQPG-FTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGCF 116 + + G FTL ++ G + +V+W G+ L + + G Sbjct: 62 KKMKQEVGGLGVFTLRIEKLGVFPGKGLPKVIWAGVNGKKDKFRNLYDRTQRSLRTLGFA 121 Query: 117 QSNRPFHPHITLLRDASEAVTIPPPGFNWSYA----------VTEFTLYASSFARGRTRY 166 +P PH+TL R S T S+ + L S R Y Sbjct: 122 PDKKPLSPHLTLGRVRSARGTKELTAAMASFNSSNCFLGDEIIDSVDLMRSELTRNGAIY 181 Query: 167 TPLKRWAL 174 T ++ L Sbjct: 182 TIMESIVL 189 >UniRef50_A1RS17 2'-5' RNA ligase n=5 Tax=Thermoproteaceae RepID=A1RS17_PYRIL Length = 187 Score = 147 bits (373), Expect = 1e-34, Method: Composition-based stats. Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 13/177 (7%) Query: 6 RLFFAIDL-PAEIREQIIHWRAT-HFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 R F AID+ EI +++ + + V +NLHLTL FLGE+ + + Sbjct: 5 RAFVAIDVENPEIVKKVEEIQREVLRLGLDIKLVEKENLHLTLRFLGEIPQSRVNDIVKS 64 Query: 64 AGRIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 IR F + L G + + RV+W+G+ + L+ LAN++R+ + + +R Sbjct: 65 LTTIRFSKFKIALSGLGVFPDLAKPRVLWIGVSKGLENLVNLANIVRNLVDKYAEHREDR 124 Query: 121 PFHPHITLLRDAS-----EAVTIPPPGFNWSY---AVTEFTLYASSFARGRTRYTPL 169 F PH+T+ R S + + + V + L S Y+ L Sbjct: 125 EFSPHLTIGRIKSGRNIDKLREVIERYREAEFGVIEVDKVKLKKSVLTPRGPIYSDL 181 >UniRef50_B0K2A3 2'-5' RNA ligase n=9 Tax=Thermoanaerobacter RepID=B0K2A3_THEPX Length = 182 Score = 147 bits (373), Expect = 1e-34, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 69/182 (37%), Gaps = 13/182 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFP-PEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 R F IDL + ++ ++ GR DN H+TL FLGE+ E + Sbjct: 1 MRTFIGIDLDEKSIGKLSSFQEELKNYTIKGRWTHKDNFHITLKFLGEIETESVMKIKDS 60 Query: 64 AGRI--RQPGFTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQS 118 F + D G + + RV+W+G + L +L + + + + G + Sbjct: 61 LEVAVKDISPFYIKFDKVGFFKGNGDMRVLWVGTEENS-FLNKLHDNIDEELYKIGFEKD 119 Query: 119 NRPFHPHITLLRDAS------EAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRW 172 R F HIT+ RD E ++ + V LY S R +Y P+ Sbjct: 120 KRKFTSHITIARDIRLSIDIEEVNSLFEKQEKGAILVDTVFLYESVIQENRRKYIPIFSV 179 Query: 173 AL 174 L Sbjct: 180 PL 181 >UniRef50_A3K2S8 2',5' RNA ligase n=1 Tax=Sagittula stellata E-37 RepID=A3K2S8_9RHOB Length = 175 Score = 147 bits (373), Expect = 1e-34, Method: Composition-based stats. Identities = 55/177 (31%), Positives = 79/177 (44%), Gaps = 9/177 (5%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF A+ LP + R + + GRPV +NLHLTLAFLG+ E +AL Sbjct: 1 MRLFIALSLPPDARGPLTALQERL---PVGRPVPEENLHLTLAFLGDQPDEAVEALHDAL 57 Query: 65 GRIRQPGFTLTLDDAGQWLRSRVVWLGMRQP-PRGLIQLANMLRSQAARSGCFQSNRPFH 123 +R P LTL A + +G+ + L ++ + +RS+ +G R F Sbjct: 58 STLRAPAVPLTLSGAALFGGKSGQAVGLEADGGKALTEMFDRVRSRLRSAGVRVERRRFR 117 Query: 124 PHITLLR-----DASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALT 175 PH+TL R DAS A+++ T F L+ S R Y L +AL Sbjct: 118 PHVTLARLKGGADASGALSVLAGASIGPVVATSFGLFRSHLNRDGAIYEALSVYALV 174 >UniRef50_A3QHP4 2'-5' RNA ligase n=1 Tax=Shewanella loihica PV-4 RepID=A3QHP4_SHELP Length = 176 Score = 147 bits (372), Expect = 1e-34, Method: Composition-based stats. Identities = 59/175 (33%), Positives = 82/175 (46%), Gaps = 8/175 (4%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 +RLF AI A EQ+ +A+ GR V DNLH+TLAFLG+ S +++ALS Sbjct: 2 KRLFLAIAPDAAQLEQLTQLQASLDG--EGRLVPRDNLHMTLAFLGQCSEAQQEALSESL 59 Query: 65 GRIRQ----PGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 R+ P F +TL+ W++ +++ L GLI L N + A + G S Sbjct: 60 ARLAHQRRLPTFEVTLNTLEHWVKPKILCLKGAARDPGLISLFNQCQRLAQQLGLHTSEH 119 Query: 121 PFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALT 175 F PHITL+R A + P + S LY S + Y L W LT Sbjct: 120 SFTPHITLMRKAKMLPELKAPSLSLSGHA--LHLYHSQSSEQGVLYKVLASWPLT 172 >UniRef50_Q2RN52 2',5' RNA ligase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RN52_RHORT Length = 199 Score = 147 bits (371), Expect = 2e-34, Method: Composition-based stats. Identities = 43/180 (23%), Positives = 66/180 (36%), Gaps = 14/180 (7%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF A+ L +R ++ A R A NLH+TL FLGE + + Sbjct: 3 RLFIALTLDDSLRARLSGLEA---GIPGARWAPAQNLHVTLRFLGETEEGLAREIDAALL 59 Query: 66 RIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 +R FTL + G + R R++W G+ + L L + + G + Sbjct: 60 SVRAEPFTLPIAGLGVFGGERRPRLLWAGV-EKTPALTLLKGRIDAALRGLGVGPDEHVY 118 Query: 123 HPHITLLRDASEAVTIPPPGFNW-------SYAVTEFTLYASSFARGRTRYTPLKRWALT 175 PHI+L R + S VT F+L++S Y + L Sbjct: 119 SPHISLARLKTPDPERLRRFVEANNLSVRGSLTVTSFSLFSSLLTGEGPLYREEAVYPLA 178 >UniRef50_B1L7J5 2'-5' RNA ligase n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L7J5_KORCO Length = 187 Score = 147 bits (371), Expect = 2e-34, Method: Composition-based stats. Identities = 46/185 (24%), Positives = 76/185 (41%), Gaps = 14/185 (7%) Query: 4 PQRLFFAIDL-PAEIREQIIHWRATHFPPEA-GRPVAADNLHLTLAFLGEVSAEKEKALS 61 P R F AID+ E+ +I+ + A +PV +NLHLTL FLGEV ++ + Sbjct: 2 PIRSFIAIDIEDPEVISKILSIQEEICSSSAKLKPVERENLHLTLKFLGEVEEDRLTQVM 61 Query: 62 LLAGRI--RQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCF 116 + I + F + L G + R VVW+G + +++A+ L ++ G Sbjct: 62 SIMDDILKKFSQFRMKLKGIGAFPTINRPNVVWIGAEEGREAFVRVASELDRALSKMGFQ 121 Query: 117 QSNRPFHPHITLLRDASEAVTIPPPGFNWS------YAVTEFTLYASSFARGRTRYTPLK 170 + + PH+T+ R +P S V E L S+ Y + Sbjct: 122 RE-KGIEPHLTIARVKGPIGNLPEIIRKLSDIEIGYIDVREVKLKKSTLTPRGPIYGDMH 180 Query: 171 RWALT 175 L+ Sbjct: 181 VVKLS 185 >UniRef50_O26683 UPF0097 protein MTH_583 n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=Y583_METTH Length = 184 Score = 147 bits (371), Expect = 2e-34, Method: Composition-based stats. Identities = 44/185 (23%), Positives = 72/185 (38%), Gaps = 16/185 (8%) Query: 4 PQRLFFAIDLPAEIREQIIHWRATHFPPEA-GRPVAADNLHLTLAFLGEVSAEKEKALSL 62 R F A+DL +R+ + + T +A + V +NLH TL F G+V K + + Sbjct: 2 KVRAFLAVDLDEGLRDHVSRIQDTLKSADAQVKFVEPENLHFTLKFFGDVGEGKLRRIEN 61 Query: 63 LAGRI--RQPGFTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQ 117 + F +++ AG + RVVWLG+ + P L L + + G Sbjct: 62 VVRDTLRGYEPFEISIRGAGVFPNPRYIRVVWLGV-ENPETFSDLQRSLDMEFVKMGFRP 120 Query: 118 SNRPFHPHITLLRDASEAVTIPPPG--------FNWSYAVTEFTLYASSFARGRTRYTPL 169 R + PH+T+ R S V+E +L S YT + Sbjct: 121 E-RDYVPHLTVGRVKGPRNRDKLAELIGELQNVEVGSMRVSEVSLKRSELTPAGPIYTDM 179 Query: 170 KRWAL 174 + + L Sbjct: 180 EVFRL 184 >UniRef50_A7GTX3 2'-5' RNA ligase n=73 Tax=Bacillus cereus group RepID=A7GTX3_BACCN Length = 184 Score = 147 bits (371), Expect = 2e-34, Method: Composition-based stats. Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 11/180 (6%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGR-PVAADNLHLTLAFLGEVSAEKEKALSLLA 64 F AI LP +I+E++ +++ R V ++ H+TLAFLG + E+ + + Sbjct: 4 HYFIAITLPHDIKERLANYKEEMNDTLPFRSWVHKEDYHITLAFLGSATQEQLQEIKEGL 63 Query: 65 GRIRQPG-FTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 ++ F+L L + R R+ W G+ + + L+ L + S RSG R Sbjct: 64 HLLKNEQEFSLLLQGFSTFGPPERPRIFWAGLEE-SKALLHLQKKVHSICERSGFSLETR 122 Query: 121 PFHPHITLLRDASEAVTIPPPGF----NWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ 176 PFHPHIT+ R S+ V TLY S+ + +Y P+ L + Sbjct: 123 PFHPHITIARKWIGEAMFHIEDIKELKPVSFPVDTVTLYRSNM-KDTPKYHPVTEIKLQK 181 >UniRef50_Q1GUY9 2',5' RNA ligase n=2 Tax=Sphingomonadales RepID=Q1GUY9_SPHAL Length = 204 Score = 147 bits (371), Expect = 2e-34, Method: Composition-based stats. Identities = 45/183 (24%), Positives = 71/183 (38%), Gaps = 13/183 (7%) Query: 3 EPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSL 62 RLF A+ P +R ++ R + + LHLTL F+GEV + ++ Sbjct: 2 STHRLFVALRPPPPVRALLLRA---MHGISGARWQSDEQLHLTLRFIGEVDHHLAEDIAA 58 Query: 63 LAGRIRQPGFTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 + G + P + + + R +VW + P L L + AR G Sbjct: 59 VLGALHAPAARVRIAGVDLFERQGRPHMVWARI-APEEPLAALHRKVEQCLARVGIAAET 117 Query: 120 RPFHPHITLLRDASEAVTIPP------PGFNWSYAVTEFTLYASSFARGRTRYTPLKRWA 173 R F PH+TL R + + P + + TLY S G +RY P+ R+ Sbjct: 118 RAFVPHVTLARLNRSSGPVAPFLALNGDLASDPFLFDHVTLYESEMGHGGSRYHPVARYP 177 Query: 174 LTQ 176 L Sbjct: 178 LVD 180 >UniRef50_C7LNR7 2'-5' RNA ligase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LNR7_DESBD Length = 184 Score = 146 bits (370), Expect = 2e-34, Method: Composition-based stats. Identities = 41/184 (22%), Positives = 68/184 (36%), Gaps = 12/184 (6%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGR--PVAADNLHLTLAFLGEVSAEKEKALSL 62 RLF I LP E + I + + V D H+TL FLGEV ++ A+ Sbjct: 1 MRLFIGIPLPGEYAQIIGRIQEAWKKRLTSKMSWVRPDLAHVTLKFLGEVDEDRVVAIVQ 60 Query: 63 LAGRIRQPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 + F + G + RV+W+G+RQ L A++G + Sbjct: 61 AMREAARGSFEMQGGAGGFFPPKGAPRVIWVGLRQGREECAAYFEELDGGLAQAGFVAES 120 Query: 120 RPFHPHITLLRDASEAVTIP------PPGFNWS-YAVTEFTLYASSFARGRTRYTPLKRW 172 +PF H+T+ R + + +W + V+ L+ S Y + Sbjct: 121 KPFAAHLTVARVKAAMRSDDWSGLLVDLKRDWPAFTVSHVVLWQSILKSSGPEYRRVAEV 180 Query: 173 ALTQ 176 L + Sbjct: 181 GLEK 184 >UniRef50_C6QFN4 2'-5' RNA ligase n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QFN4_9RHIZ Length = 190 Score = 146 bits (369), Expect = 3e-34, Method: Composition-based stats. Identities = 47/177 (26%), Positives = 70/177 (39%), Gaps = 13/177 (7%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF AI++P EIR+++ R P R ++ +N H+TL F G++ K + Sbjct: 3 RLFTAIEIPDEIRDELHRLR---LPLPGARWISPENYHITLRFAGDIDNAKAREFIANLA 59 Query: 66 RIRQPGFTLTLDDAGQWLR--SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 I GF L + G + +W GM +P L LA A +G R F Sbjct: 60 SIDVDGFELRITGLGAFGGDDPHSIWAGM-EPNAKLDDLARAHEKAARNAGLAPETRAFR 118 Query: 124 PHITLLRDASEAVTIPPPG-------FNWSYAVTEFTLYASSFARGRTRYTPLKRWA 173 PH+TL R + + VT L +S + G Y R+ Sbjct: 119 PHVTLARLKHSNAEAVARFLSRYSGYRSEPFFVTRTLLMSSRPSVGGGPYGIEDRFP 175 >UniRef50_B9KQ60 2'-5' RNA ligase n=4 Tax=Rhodobacter sphaeroides RepID=B9KQ60_RHOSK Length = 193 Score = 146 bits (369), Expect = 3e-34, Method: Composition-based stats. Identities = 54/182 (29%), Positives = 72/182 (39%), Gaps = 16/182 (8%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 R F A+DLPAE+R + + P R + ++ HLTL FLGEV +A Sbjct: 2 IRAFVALDLPAEVRSALA-VQQFLLPLP--RKIEPESFHLTLLFLGEVPEPVLEAAHEEF 58 Query: 65 GRIRQPGFTLTLDDAGQWL--RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 I +P F L + G + R R W G+R P L +L + A +G R F Sbjct: 59 ETIVRPPFGLEVAGLGLFGGERPRAAWAGLR-PSDPLARLQCRIERAARVAGIEPERRRF 117 Query: 123 HPHITLLRDASEAVTIP----------PPGFNWSYAVTEFTLYASSFARGRTRYTPLKRW 172 PH+TL R A + VT F LY S RY L + Sbjct: 118 VPHVTLGRFAPPPPEERFRLERAVAEGASFRGGGFEVTRFVLYRSHPGPKGARYEELATY 177 Query: 173 AL 174 L Sbjct: 178 PL 179 >UniRef50_B8I3E4 2'-5' RNA ligase n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I3E4_CLOCE Length = 181 Score = 146 bits (368), Expect = 4e-34, Method: Composition-based stats. Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 9/180 (5%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPE-AGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 R+FFAI+ +I+ + + +G +N HLTL F+GE + + + L + Sbjct: 1 MRVFFAIEFDDDIKTYLSEIQQKVRQHCTSGNFTLKENFHLTLRFIGEQNTDHVQNLKQV 60 Query: 64 A-GRIRQPGFTLTLDDAGQW--LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 + GF L LD G + ++WLG+ + L QL N + ++ G + R Sbjct: 61 LKDAAQFQGFELILDKPGIFRKGNRGIIWLGIEKSL-QLQQLYNNMEDLLSQKGYQKEER 119 Query: 121 PFHPHITLLRDAS----EAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ 176 ++PHITL R+ +T + V +L S + Y PL+R LT Sbjct: 120 SYNPHITLAREVKTEDFGFLTEKIEIDKLTMKVKSISLMESKRINDKLAYIPLERAELTD 179 >UniRef50_D1ZYF9 Whole genome shotgun sequence assembly, contig_3985 n=2 Tax=cellular organisms RepID=D1ZYF9_SORMA Length = 183 Score = 146 bits (368), Expect = 4e-34, Method: Composition-based stats. Identities = 46/179 (25%), Positives = 68/179 (37%), Gaps = 13/179 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF A+ P +RE + + E R + LHLTL ++GEV + ++++ Sbjct: 2 HRLFIALRPPVAMREALFDVQD---GVEGARWQDDEQLHLTLRYVGEVERPVAEDIAVVL 58 Query: 65 GRIRQPGFTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 +R P F L L GQ+ R R +W G+ P + L + R G R Sbjct: 59 QGVRAPAFDLALSGVGQFDAGRRGRALWAGVT-PHDAVAALHRKVDHALVRIGLPPEGRA 117 Query: 122 FHPHITLLRDASE------AVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 F PHITL R + + F LY S Y + R+ Sbjct: 118 FLPHITLARLNKSSGPTEMFLAAHAGLTSSPIRFDHFILYESHVGHAGAWYESVARYPF 176 >UniRef50_C6MFU4 2'-5' RNA ligase n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MFU4_9PROT Length = 181 Score = 146 bits (368), Expect = 4e-34, Method: Composition-based stats. Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 1/172 (0%) Query: 3 EPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSL 62 + R+FFAI ++++Q+I+ G + +LH+TL FLG +S + + L Sbjct: 10 KSIRVFFAIFPNRQVQKQLIYHSEMLESIYGGHKIKMQHLHITLLFLGNISIHQIQTLQQ 69 Query: 63 LAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 +A I F L LD G W + ++++ ++ P L L + L+ + +G NR + Sbjct: 70 IAKMISAKKFELKLDIIGYWKHNHIIYIKAKEFPTELFSLTDSLKIALSENGFVFDNRAY 129 Query: 123 HPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 PHIT+LR + + V ++ L S Y PL W L Sbjct: 130 KPHITILRKTICHINTNM-IKPIQWCVNQWFLIQSQPTHYGVEYIPLNHWHL 180 >UniRef50_B8GHT8 2'-5' RNA ligase n=1 Tax=Methanosphaerula palustris E1-9c RepID=B8GHT8_METPE Length = 179 Score = 146 bits (368), Expect = 5e-34, Method: Composition-based stats. Identities = 47/178 (26%), Positives = 69/178 (38%), Gaps = 10/178 (5%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEA-GRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 R F IDLPA IRE+I + A V +H+TL F+GEV+ E+ +S Sbjct: 3 RAFIGIDLPASIREEIAAVQPALRAVPADISLVNPAIIHITLRFIGEVTEEEIGRISAAL 62 Query: 65 GRIRQPGFTLTLD--DAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 I+ F +++ R RV+W G+ R L + + + G R F Sbjct: 63 QTIKVKPFPVSIRPVTLNSRTRPRVIWCGVEDQGRS-AALHQAIEAVLSPLGYEPEARAF 121 Query: 123 HPHITLLRDASEAVTIPPPGFNW------SYAVTEFTLYASSFARGRTRYTPLKRWAL 174 PH T+ R ++ + + V EF L S YT L L Sbjct: 122 TPHATVGRIRRGHSSLEGVIDSLGQNGFGDFEVGEFKLKQSVLTAKGPIYTDLCVVTL 179 >UniRef50_A0KP01 2'-5' RNA ligase n=2 Tax=Aeromonas RepID=A0KP01_AERHH Length = 179 Score = 145 bits (367), Expect = 5e-34, Method: Composition-based stats. Identities = 57/168 (33%), Positives = 77/168 (45%), Gaps = 4/168 (2%) Query: 7 LFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAGR 66 LFFA+ + ++ WR P G+PV A NLHLTLAFLGE L R Sbjct: 8 LFFAL-PAEALAPDLVAWRDQLPWP--GQPVPAANLHLTLAFLGEADPLTTTRLMAAVER 64 Query: 67 IRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPHI 126 P T+ L++ G + R++ W+G + P L LA LR + G + + PH+ Sbjct: 65 QHCPPLTIALNETGWFGRAKAAWVGPTEWPNELTVLARALRRHGEKLGLGNGEQGYRPHV 124 Query: 127 TLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 TL R ASE + P ++ F LY S RY PL W L Sbjct: 125 TLSRKASEPPALLPAP-DFVLQADRFCLYQSLSTPDGVRYEPLACWPL 171 >UniRef50_A4YHN8 2'-5' RNA ligase n=1 Tax=Metallosphaera sedula DSM 5348 RepID=A4YHN8_METS5 Length = 180 Score = 145 bits (366), Expect = 6e-34, Method: Composition-based stats. Identities = 42/181 (23%), Positives = 65/181 (35%), Gaps = 16/181 (8%) Query: 5 QRLFFAIDLPAE--IREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSL 62 RLF I + +RE + T + V N+H+TLAFLGEV+ ++ + Sbjct: 1 MRLFIGIPVYDAPWLREALGMVERT---GADVKLVEPQNVHITLAFLGEVAEDRVNLVRE 57 Query: 63 LAGRIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 ++ F + G + R RVVW+G+ + L ++ L Sbjct: 58 SLDEVKFTAFRVVFRGLGAFPSVSRPRVVWMGITEGFNELKRIRTSLVKALNSRRVRVEE 117 Query: 120 RPFHPHITLLRDASEAVTIPPPGFNWSY--------AVTEFTLYASSFARGRTRYTPLKR 171 F PH+TL R + V E L+ S+ Y PL R Sbjct: 118 EQFVPHLTLGRVKGPRGVLELAKLVEEMSDKQFGEQEVKEIVLFKSTLTPKGPIYDPLHR 177 Query: 172 W 172 Sbjct: 178 I 178 >UniRef50_B9L2B1 2'-5' RNA ligase n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L2B1_THERP Length = 191 Score = 145 bits (366), Expect = 6e-34, Method: Composition-based stats. Identities = 52/190 (27%), Positives = 76/190 (40%), Gaps = 16/190 (8%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFP-PEAGRPVAADNLHLTLAFLGEVSAEKEKA 59 M E RLF AI +P ++R+++ A + V + HLT+ F G V+ + Sbjct: 1 MREEWRLFAAIPVPDDVRQRVAAAIAHLQARGYRAKWVDPEATHLTVKFFGSVATDSLPD 60 Query: 60 LSLLAGRIRQ--PGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSG 114 L+ + F L + AG + R RV+WLG+ L QL + A Sbjct: 61 LTRALRKSVTGLARFELQVHGAGAFPHPLRPRVLWLGIDGETAPLAQLVEQVERSAGSFA 120 Query: 115 CFQSNRPFHPHITLLRDASE----------AVTIPPPGFNWSYAVTEFTLYASSFARGRT 164 RPFHPH+TL R E + + V TLY S R Sbjct: 121 EKTDERPFHPHLTLARVRPEDLATLRALPQELERLARLPPLPFTVDRLTLYRSELFRSGP 180 Query: 165 RYTPLKRWAL 174 RYT ++ + L Sbjct: 181 RYTIIEEFLL 190 >UniRef50_Q0BX97 2'-5' RNA ligase n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BX97_HYPNA Length = 186 Score = 145 bits (366), Expect = 6e-34, Method: Composition-based stats. Identities = 49/182 (26%), Positives = 71/182 (39%), Gaps = 15/182 (8%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF A+ +P E+ + + +N H+TL F GE++ + + L L Sbjct: 3 RLFAALPIPPEVSAPLRKLQKDL---PGASWRPEENFHVTLCFYGELTGNQARDLDELLD 59 Query: 66 RIRQPGFTLTLDDAGQWLR--SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 I F L ++ G + R VW + + L LA+ A R G PF Sbjct: 60 EIEADAFDLRVEGMGWFGRREPNAVWARIGEC-DALRALASQCERAARRLGLPLEKHPFT 118 Query: 124 PHITLLR-------DASEAVTIPPPGFNWSYAVTEFTLYASSFARGR--TRYTPLKRWAL 174 PHITL A E V + + F LYAS RG +RY P+ + L Sbjct: 119 PHITLAYLHATPLEAAQEWVHTHQSHRSEPFRARLFHLYASRPRRGGGPSRYEPMADYPL 178 Query: 175 TQ 176 Sbjct: 179 RD 180 >UniRef50_B6JCZ3 2'-5' RNA ligase n=13 Tax=Alphaproteobacteria RepID=B6JCZ3_OLICO Length = 192 Score = 145 bits (366), Expect = 7e-34, Method: Composition-based stats. Identities = 42/179 (23%), Positives = 77/179 (43%), Gaps = 13/179 (7%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF +++P +I + + R GR V +N H+TL F+G++ + + ++ Sbjct: 3 RLFTGLEIPPDISQSLSMLRGGL---PGGRWVDPENYHVTLRFIGDIDDDVAREIAGSLE 59 Query: 66 RIRQPGFTLTLDDAGQWL--RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 RI + F +TL + + R V + P R L++L R G R F Sbjct: 60 RIDRQPFEVTLQGLSSFGGKKPRAVVACV-APTRPLMELQAEHERLMRRFGLEPEGRKFI 118 Query: 124 PHITLL-------RDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALT 175 PH+TL RD ++ +++ + + F L++S + G Y + L+ Sbjct: 119 PHVTLARLRDASSRDVADYLSVRGYFPAKRFVASRFVLFSSRASVGGGPYVVEDSYGLS 177 >UniRef50_UPI00016C441C 2''''-5'''' RNA ligase n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C441C Length = 191 Score = 144 bits (365), Expect = 9e-34, Method: Composition-based stats. Identities = 43/190 (22%), Positives = 69/190 (36%), Gaps = 16/190 (8%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFP-PEAGRPVAADNLHLTLAFLGEVSAEKEKA 59 M+ +R F ID+ IR + + V +++H+TL FLG+V + A Sbjct: 1 MAR-RRTFIGIDIGDAIRGSAKALQKELAKVDPGVKWVTPESMHVTLLFLGDVDDRELHA 59 Query: 60 LSLLAGRIRQ--PGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARS- 113 + + P F+L + G + R +VVW G+ L +L L + Sbjct: 60 VCKAVAAAARGEPSFSLRVSGLGVFPNARRPKVVWAGVTDGADVLRRLHTALEEKMLALG 119 Query: 114 GCFQSNRPFHPHITLLRDASE--------AVTIPPPGFNWSYAVTEFTLYASSFARGRTR 165 G R + PH+TL R + + V E +Y S Sbjct: 120 GYRSEERGYTPHLTLGRVNTPEAAVAVAAELPKRTAWQGGRVTVDEVLVYDSELNSDGPV 179 Query: 166 YTPLKRWALT 175 YT + R L Sbjct: 180 YTVVGRAPLA 189 >UniRef50_C3NHZ6 2'-5' RNA ligase n=11 Tax=Sulfolobus RepID=C3NHZ6_SULIN Length = 194 Score = 144 bits (365), Expect = 9e-34, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 73/180 (40%), Gaps = 13/180 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF I++P + + + + V N+H+TL FLGEV ++ + + Sbjct: 1 MRLFIGIEVPQSPK-LLEIFEIVKNAGADIKLVEPYNIHITLLFLGEVREDRVEEVKDSM 59 Query: 65 GRIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQS-NR 120 ++ F +TL G + R RVVW+G+ + + L Q+ + + ++ + ++ Sbjct: 60 SGLKFNKFKVTLKGLGAFPNLTRPRVVWVGIVEGQQQLRQIRSYILNELLKRKIRPEDDK 119 Query: 121 PFHPHITLLRDAS--------EAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRW 172 F PH+T+ R S + ++ V L+ S+ Y L Sbjct: 120 DFSPHLTIGRVKSYNSISNLINTINENMNVDIGTFEVNNAVLFKSTLTPKGPIYDKLFEV 179 >UniRef50_Q2Z065 Putative 2'-5' RNA ligase n=1 Tax=uncultured gamma proteobacterium RepID=Q2Z065_9GAMM Length = 179 Score = 144 bits (365), Expect = 1e-33, Method: Composition-based stats. Identities = 61/174 (35%), Positives = 78/174 (44%), Gaps = 5/174 (2%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 +R+FF ++ AE I WR G+PV A N H+TLAF+GE+ + LS A Sbjct: 2 KRVFFGLEPDAETCRGIADWRDRQTS-CDGQPVPAANFHITLAFVGELHDAALERLSRAA 60 Query: 65 GRIRQPGF----TLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 G LT++DAG W R + WLG P L QL+ L A G + R Sbjct: 61 DDWFAQGVAHGGNLTINDAGYWPRPGIFWLGPTHWPESLQQLSQKLGLLAGAVGGKRDRR 120 Query: 121 PFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 PF PHITL R A T P ++ TL+ S R Y L W L Sbjct: 121 PFQPHITLYRRCRTAPTAPLQLPTFTLRYRHCTLFESRQGRQGVSYQALLDWPL 174 >UniRef50_Q0Q0I5 LigT n=1 Tax=Heliophilum fasciatum RepID=Q0Q0I5_9FIRM Length = 206 Score = 144 bits (364), Expect = 1e-33, Method: Composition-based stats. Identities = 48/182 (26%), Positives = 73/182 (40%), Gaps = 12/182 (6%) Query: 5 QRLFFAIDLPAEIREQIIHWR-ATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 RLFFAI LP + + + + F + G DN H+T+AFLGE + L Sbjct: 1 MRLFFAITLPETVTKALTDLQWRVRFQLKRGNYTQPDNFHITVAFLGEQPDDVPDLLIPP 60 Query: 64 AGRIRQ--PGFTLTLDDAGQWL--RS-RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQS 118 + + F+LTLD G++ R +W+G++ L L + G Sbjct: 61 LNALAKYTSPFSLTLDGMGRFGYGNPFRALWMGVQGERTRLNYLQETVSMICEVLGYPTE 120 Query: 119 NRPFHPHITLLRDASEAVTIPP------PGFNWSYAVTEFTLYASSFARGRTRYTPLKRW 172 R + PH+TL+R A P ++ V F L S GR Y P+ + Sbjct: 121 ERHYRPHVTLVRHAVFPPNTEEVMTWTIPRNKATFKVNHFVLMESVTQHGRVVYRPVHTF 180 Query: 173 AL 174 Sbjct: 181 HF 182 >UniRef50_Q5SHB1 2'-5' RNA ligase n=7 Tax=Thermaceae RepID=Q5SHB1_THET8 Length = 198 Score = 144 bits (364), Expect = 1e-33, Method: Composition-based stats. Identities = 53/181 (29%), Positives = 77/181 (42%), Gaps = 13/181 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF+A+ LP E+R ++ + P +PV LHLTL FLGE E+ L Sbjct: 1 MRLFYAVFLPEEVRAALVEAQTKVRPFRGWKPVPPHQLHLTLLFLGERPEEELPDYLALG 60 Query: 65 GRIRQ--PGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARS------ 113 R+ + F L G + RV + G ++LA LR+ Sbjct: 61 HRLARLEAPFRARLRGTGYFPNEGTPRVWFAKAEA--EGFLRLAEGLRAGVEELLGEEAV 118 Query: 114 GCFQSNRPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWA 173 ++PF PHITL R + A +PP F + V F L S YT L++++ Sbjct: 119 RIPGWDKPFKPHITLARRKAPAPRVPPVLFGLEWPVEGFALVRSELKPKGPVYTVLEKFS 178 Query: 174 L 174 L Sbjct: 179 L 179 >UniRef50_D0CTG2 2'-5' RNA ligase n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CTG2_9RHOB Length = 181 Score = 144 bits (364), Expect = 1e-33, Method: Composition-based stats. Identities = 47/174 (27%), Positives = 75/174 (43%), Gaps = 11/174 (6%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 R F I + EI + + GRPV +NLHLTL FL E + + L + Sbjct: 10 MRCFVGIPVSGEIADLCVELG---RSASDGRPVPRENLHLTLQFLDEQPHDSLEELHMQL 66 Query: 65 GRIRQPGFTLTLDDAGQWLRS-RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 +R P F++ + GQ+ ++ V M +P L L + + + RSG +R F Sbjct: 67 DALRHPVFSIRVSGLGQFGQTLHV----MVEPSSILQSLHDKVLACVRRSGIRVPHRRFR 122 Query: 124 PHITLLRDASEAVTIPPPGFNW---SYAVTEFTLYASSFARGRTRYTPLKRWAL 174 PHIT+ R + + + V +F L++S+ RY L + L Sbjct: 123 PHITVARGLKKCPSNDFLKQPITDCTMQVAQFALFSSTLHSSGARYETLADYQL 176 >UniRef50_B5IAZ8 2'-5' RNA ligase n=2 Tax=Aciduliprofundum boonei T469 RepID=B5IAZ8_9EURY Length = 176 Score = 144 bits (364), Expect = 1e-33, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 75/178 (42%), Gaps = 13/178 (7%) Query: 4 PQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 R F AI++P ++I + + + V +N+H+TL FLGE+ + + + Sbjct: 5 SMRTFIAIEIP--FFKEIEELQKSIEGR--AKLVEGENMHITLKFLGEIEEKLVDEIKRI 60 Query: 64 AGRIRQPGFTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 + F ++L G + RV+W+G+ ++++A + + ++ G + + Sbjct: 61 VEDCKVEKFKISLQGIGFFPNERYIRVIWIGIDGY-EPIVKMAKCMDEKLSKLGFERE-K 118 Query: 121 PFHPHITLLRDA-SEAVTIPPPGFNWSY---AVTEFTLYASSFARGRTRYTPLKRWAL 174 + PH+T+ R A+T N + V E + S+ Y + L Sbjct: 119 SYVPHLTVARAKGRVAITNYDRFKNLKFGEVNVREVKIKRSTLTPKGPIYEDVAVIQL 176 >UniRef50_B5HLE7 2',5' RNA ligase n=6 Tax=Streptomyces RepID=B5HLE7_9ACTO Length = 190 Score = 144 bits (364), Expect = 1e-33, Method: Composition-based stats. Identities = 46/186 (24%), Positives = 71/186 (38%), Gaps = 16/186 (8%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAG---RPVAADNLHLTLAFLGEVSAEKEKALS 61 RLF A+ P ++ E++ A R H TLAF GEV + LS Sbjct: 1 MRLFAAVLPPQDVTEELAAVVAELRRLPGAEGLRWTGVPGWHFTLAFYGEVDDDVVPELS 60 Query: 62 LLAGRI--RQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQ-S 118 R R P F L + G++ R +W G L LA + ++G Sbjct: 61 ERLERAARRTPCFPLAVRGGGEFGHGRALWAGASGELPALRLLAERAEAAGRKAGVEMGE 120 Query: 119 NRPFHPHITLLRDA-----SEAVTIPPPGFNWSYAVTEFTLYASSFARGR-----TRYTP 168 +R + H+T+ R +++ + ++ V E L S+ R RY Sbjct: 121 HRRYKAHLTVARSRGAVEVRPYLSVLDGFTSRTWTVDELALVRSNLPRSGVPGEQPRYEV 180 Query: 169 LKRWAL 174 + RWAL Sbjct: 181 VGRWAL 186 >UniRef50_B0T6B2 2'-5' RNA ligase n=5 Tax=Caulobacteraceae RepID=B0T6B2_CAUSK Length = 178 Score = 144 bits (364), Expect = 1e-33, Method: Composition-based stats. Identities = 44/180 (24%), Positives = 69/180 (38%), Gaps = 14/180 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF A+ +PAE+ + ++ + E R + H+TL F+G+V + L Sbjct: 2 IRLFTAVAIPAEVGDHLLLRQ---HGIEGARWRPREAFHITLKFIGDVQETQAVDLDEEL 58 Query: 65 GRIRQPGFTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 + P F L L G + VW G+ + P L +LA A R+G R Sbjct: 59 QGVEAPAFDLELQGVGHFGEGIEIHAVWAGLAESPD-LRRLAKANEGAARRAGLKPETRL 117 Query: 122 FHPHITLLRDASEAVTIPPPGFNW-------SYAVTEFTLYASSFARGRTRYTPLKRWAL 174 + PH+TL AV + + F LY+S + Y + L Sbjct: 118 YTPHVTLAYLKRPAVPEVAAWIQANNLLHSPPFRIDRFGLYSSWRTSEGSAYRLEAEYPL 177 >UniRef50_Q67NU4 Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67NU4_SYMTH Length = 193 Score = 144 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 46/191 (24%), Positives = 72/191 (37%), Gaps = 19/191 (9%) Query: 5 QRLFFAIDLP-AEIREQIIHWRATHFPPEAG-----RPVAADNLHLTLAFLGEVSAEKEK 58 R F A+++ ++R+ ++ + V D H TL F GE+ + + Sbjct: 1 MRCFAAVEVSSPDVRQALVRACDELRRALGADAGLVKWVRPDQFHFTLRFFGELGPTEVE 60 Query: 59 ALSLLAGRIR--QPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARS 113 A + R F L + G + RV+W G + LI LA L + A + Sbjct: 61 AAAQALRRAAAGTAPFPLAVAGLGAFPSARSPRVLWAGTGEGREQLIALARRLEDELAAA 120 Query: 114 GCFQSNRPFHPHITLLRDASEA--------VTIPPPGFNWSYAVTEFTLYASSFARGRTR 165 G + RPF PH+TL R A + PP + V L S R Sbjct: 121 GFGREERPFQPHLTLGRVRQGADLAAPLRGLLTRPPVRYGDWLVDRLVLMRSELLPAGPR 180 Query: 166 YTPLKRWALTQ 176 YT ++ L + Sbjct: 181 YTVVEAAELVR 191 >UniRef50_A8F8W1 2'-5' RNA ligase n=1 Tax=Thermotoga lettingae TMO RepID=A8F8W1_THELT Length = 187 Score = 144 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 41/178 (23%), Positives = 72/178 (40%), Gaps = 13/178 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRATH-FPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 R F A+D+ +R V+ +N+HLTL FLGEV + K ++ Sbjct: 1 MRTFIAVDVNENVRGVSQQIVEKLMKRGFKANWVSKENIHLTLFFLGEVQSHKVDEIARH 60 Query: 64 AGR--IRQPGFTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQS 118 + P F+ ++ G + + RV+WLG++ + L +L ++S+ + Sbjct: 61 LCHRIMGFPSFSYIVEKLGYFSKQSKPRVIWLGIK-SNQALQKLYEEMKSELVKHNFSFE 119 Query: 119 NRPFHPHITLLRDASEAVTIPPPGFNWSYA-----VTEFTLYASSFARGRTRYTPLKR 171 R F PHIT+ R P + ++ V F++Y S Y + Sbjct: 120 ER-FSPHITVGRIKDFPGAWQPLIEDITFEPITVAVDRFSIYFSRLTPAGPIYKKVYE 176 >UniRef50_A3CSA5 2'-5' RNA ligase n=1 Tax=Methanoculleus marisnigri JR1 RepID=A3CSA5_METMJ Length = 179 Score = 144 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 48/176 (27%), Positives = 67/176 (38%), Gaps = 10/176 (5%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRP-VAADNLHLTLAFLGEVSAEKEKALSLLA 64 R F AIDLP EIRE+ + V NLHLT+ FLGEV + + Sbjct: 3 RTFVAIDLPEEIRERARESQEILRRSSGRLAIVDPANLHLTVKFLGEVDPAQVDPVVEAL 62 Query: 65 GRIRQPGFTLTLDDAGQWL--RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 + F+LT+ A + RV+W + LA + + A G + RPF Sbjct: 63 RAVHADPFSLTVGYAVCNPPRKPRVIWCDVTDGGES-AVLARQVDALLAPLGFPRETRPF 121 Query: 123 HPHITLLRDASEAVTI------PPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRW 172 PH+TL R + P + VT L S+ + Y L Sbjct: 122 RPHVTLARVKEFHPSQCREAASTPREPLGTCRVTGIKLKKSTLTPRGSIYEDLAEV 177 >UniRef50_B9LUM8 2'-5' RNA ligase n=7 Tax=Halobacteriaceae RepID=B9LUM8_HALLT Length = 190 Score = 144 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 40/190 (21%), Positives = 64/190 (33%), Gaps = 20/190 (10%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSA---------- 54 R FFA+DLP ++ ++ +A V + H+TL FLG+++ Sbjct: 1 MRAFFAVDLPDDLAPRVADAQAALGDAAGLALVDPEQTHVTLKFLGDIAEDNDDTTPTLD 60 Query: 55 EKEKALSLLAGRIRQPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAA 111 + A F ++ G + VVW G+ L L L + Sbjct: 61 DVIAAGKQAVETANVDPFECAVEGFGVFPSLDYISVVWAGVDAGSAELTALHEALEVETT 120 Query: 112 RSGCFQSNRPFHPHITLLR----DASEAVTIPPPGFNWS---YAVTEFTLYASSFARGRT 164 G N F PH+TL R E V + + V L +S+ Sbjct: 121 ALGVDPENHAFTPHVTLARMNDARGKELVQEAVRERDPEIGRFEVDAVRLVSSTLTSDGP 180 Query: 165 RYTPLKRWAL 174 Y + + L Sbjct: 181 AYETVASFGL 190 >UniRef50_UPI0001C41DA7 2''-5'' RNA ligase LigT n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41DA7 Length = 191 Score = 144 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 38/187 (20%), Positives = 71/187 (37%), Gaps = 16/187 (8%) Query: 2 SEPQRLFFAIDLPAEIREQIIHWRATHFPPE-AGRPVAADNLHLTLAFLGEVSAEKEKAL 60 E R F AI+L + I+ + + + V A+N+H TL F G + + + + Sbjct: 6 KETIRSFLAIELDESLVPPILDVQGDFKKTDTKIKYVPAENMHFTLKFFGNIDEDIVEDI 65 Query: 61 SLLAGRI--RQPGFTLTLDDAGQWLRSRV---VWLGMRQPPRGLIQLANMLRSQAARSGC 115 S +I F L +++ G + +V +WLG+ + + + L L + + G Sbjct: 66 SGAVEKIIKNYSSFELKIENCGCFPNQKVIKVLWLGIDKDSK-ITDLQKELDKEFKKLGF 124 Query: 116 FQSNRPFHPHITLLRDASEAVTIPPPGFN--------WSYAVTEFTLYASSFARGRTRYT 167 + R + H+T+ R S S V L S+ Y Sbjct: 125 KKE-RNYISHLTIGRVKSPKNKNEIRDVIEKNKNIKIGSMTVNRVCLKKSTLTPQGPIYE 183 Query: 168 PLKRWAL 174 ++ + L Sbjct: 184 NIRVFDL 190 >UniRef50_A9FR36 Putative uncharacterized protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FR36_SORC5 Length = 195 Score = 144 bits (363), Expect = 2e-33, Method: Composition-based stats. Identities = 48/185 (25%), Positives = 75/185 (40%), Gaps = 15/185 (8%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFP-PEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 R+F A+D AE+ ++ P + + V LH+TLAF+GE+ E+ + Sbjct: 1 MRVFVAVDPGAELLAKVGDLLREISPRAPSAKWVEPAGLHITLAFMGEIGEERLPLVIAA 60 Query: 64 AGRIR--QPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAA-RSGCFQ 117 AG + TL ++ G + R RV+WLG+ L + L + +G Sbjct: 61 AGSVAAFHRPLTLRIEKGGAFGTRRRPRVLWLGVGGAVGALTAIHRDLEQTLSMSTGYVP 120 Query: 118 SNRPFHPHITLLRDASEA-----VTIPPPGFNWSY---AVTEFTLYASSFARGRTRYTPL 169 +RPF PH+TL R + + + E +Y S RYT L Sbjct: 121 EDRPFEPHLTLARSRDPRGDPALDACAQAVGSVDFGETRIEEIIVYQSELTPKGARYTAL 180 Query: 170 KRWAL 174 R L Sbjct: 181 ARVPL 185 >UniRef50_A4EPW8 2'-5' RNA ligase n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EPW8_9RHOB Length = 200 Score = 144 bits (363), Expect = 2e-33, Method: Composition-based stats. Identities = 48/187 (25%), Positives = 72/187 (38%), Gaps = 17/187 (9%) Query: 2 SEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALS 61 +EP R+F A+ LP +R+ + T AGR V A+N H+TLAFLGE S + L Sbjct: 11 AEPVRVFLALPLPEALRDDLEDLALTLR---AGRLVPAENYHVTLAFLGEQSEADLERLH 67 Query: 62 LLAGRIRQPGFTLTLDDAGQWLR--SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 + ++ F+L ++ RV+W + P L L +R + Sbjct: 68 VELQKLSSAPFSLQIEGLEAPGSKAPRVLWAKLASNPE-LTALHKAIRGRLRLCDMDLPR 126 Query: 120 RPFHPHITLLRDASE-----------AVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTP 168 F PHITL R A + ++ + F LY S Y Sbjct: 127 ERFRPHITLARFARPLRRGDAMEIASFLQAEGGYRPNAFPYSGFALYQSRLTSDGALYEE 186 Query: 169 LKRWALT 175 L + Sbjct: 187 LAHYPFQ 193 >UniRef50_Q1IWF3 2',5' RNA ligase n=2 Tax=Deinococcus RepID=Q1IWF3_DEIGD Length = 220 Score = 143 bits (362), Expect = 2e-33, Method: Composition-based stats. Identities = 50/178 (28%), Positives = 74/178 (41%), Gaps = 9/178 (5%) Query: 2 SEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALS 61 + RLF+A+ +P E+ + + RPV D LHLTLA+L V K L Sbjct: 29 NRTLRLFYALKVPQEVAAPLAEAQRQLRGNW--RPVRPDQLHLTLAYLPAVPPHKVNDLK 86 Query: 62 LLAGRIRQ--PGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGCF 116 L + Q L L G + RV + ++ GL +LAN LR+ G Sbjct: 87 RLGTALTQDLAPMLLRLRGTGYFPNEGSPRVWF--VKAEAEGLSELANQLRAGIHALGLE 144 Query: 117 QSNRPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 + PF H+TL R A +PP F+ + V L S+ + Y + + L Sbjct: 145 TEDLPFKAHVTLARKKGPAPRVPPLTFDLGWQVGHVALIRSTLRKTGPIYDTVSTFRL 202 >UniRef50_Q47TD6 2',5' RNA ligase n=1 Tax=Thermobifida fusca YX RepID=Q47TD6_THEFY Length = 182 Score = 143 bits (362), Expect = 2e-33, Method: Composition-based stats. Identities = 51/183 (27%), Positives = 75/183 (40%), Gaps = 13/183 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFP-PEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 RLF A+ PA + + A+ P R VA + H+TL FLG+V ++ ++ Sbjct: 1 MRLFTAVTPPAAALDALDAAVASARPTARGLRWVAREQWHMTLVFLGDVPDDQVDTVAGE 60 Query: 64 AGRI--RQPGFTLTLDDAGQWL----RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQ 117 GR+ R P +L+L +G + RSRV+W G+ L LA LR A G Sbjct: 61 LGRVAARHPAMSLSLRGSGTFPPQPVRSRVLWAGVDGDTAALTALATDLREAAVALGIPV 120 Query: 118 SNRPFHPHITLLRDA-----SEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRW 172 NR + PH+T+ R + + E L S RY + W Sbjct: 121 ENRRYVPHVTVARARITTNLTAPCARLETLATEPWQAAEVHLVHSRLGAV-PRYQTIATW 179 Query: 173 ALT 175 L Sbjct: 180 KLA 182 >UniRef50_C0ZGV0 Putative uncharacterized protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZGV0_BREBN Length = 198 Score = 143 bits (362), Expect = 2e-33, Method: Composition-based stats. Identities = 48/183 (26%), Positives = 66/183 (36%), Gaps = 16/183 (8%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPP-EAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 RLF A+D+PAE I + A R + NLHLTL FLGEV A+ Sbjct: 1 MRLFIALDIPAEAAAYIADVQKRLKQDVTADRWQSLANLHLTLHFLGEVDESLVPAICED 60 Query: 64 AGRIRQ--PGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAA-RSGCFQ 117 + TL + G + RV+WLG+R L QL +L + G Sbjct: 61 MDIVSAIIQPMTLRVGSFGVFPNALHPRVLWLGLRGQLSPLKQLHLLLGRRFELHEGLSY 120 Query: 118 SNRPFHPHITLLRDAS---------EAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTP 168 + + PHITL R + + F LY S +T Sbjct: 121 DRKQYRPHITLARGPHRSGNELALLDWNERYLAQEPPQWKARHFHLYRSELLPEGAVHTI 180 Query: 169 LKR 171 + Sbjct: 181 IHT 183 >UniRef50_C7IIN7 2'-5' RNA ligase n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IIN7_9CLOT Length = 182 Score = 143 bits (361), Expect = 2e-33, Method: Composition-based stats. Identities = 43/179 (24%), Positives = 77/179 (43%), Gaps = 8/179 (4%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPE-AGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 R+FFAI+L I++ + + +G +N HLTL F+GE + ++ + L + Sbjct: 1 MRVFFAIELDDGIKDYLSEIQQEVKSHCISGNFTFKENFHLTLRFIGEQNVQQVEKLKQV 60 Query: 64 AGRIRQPG-FTLTLDDAGQW--LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 + F L LD G + ++W G+ + L +L N + + ++G + R Sbjct: 61 LKDVAYNPDFELRLDKLGSFKKGNRSIIWTGLEKSL-HLQELYNNMENTLFQTGYQKEER 119 Query: 121 PFHPHITLLRDASEAV---TIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ 176 ++PHITL R+ + V +L S + Y PL+R L + Sbjct: 120 SYNPHITLAREVKMENIGFIEKMEIEQLNVKVVSISLMESKRVNNKLAYVPLERAELQK 178 >UniRef50_C3XAD7 2',5' RNA ligase n=1 Tax=Oxalobacter formigenes OXCC13 RepID=C3XAD7_OXAFO Length = 204 Score = 143 bits (361), Expect = 3e-33, Method: Composition-based stats. Identities = 43/172 (25%), Positives = 68/172 (39%), Gaps = 9/172 (5%) Query: 3 EPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSL 62 + RLF+A+ ++ + +G+ +NLH+TL FLG AL+ Sbjct: 19 DFLRLFYALIPDDVTNARLQECQI----HVSGKKTPPENLHMTLFFLGNQPKRNLPALNR 74 Query: 63 LAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 RI F + LD G + + + W+G Q P L ++ R + N F Sbjct: 75 FLDRISFEPFEMKLDKIGYFPKIGLSWIGPEQTPAQLARMFEDTRQFLIPAYLKDKNENF 134 Query: 123 HPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGR---TRYTPLKR 171 PHITL R +S+A S+ V+ L S + + Y L Sbjct: 135 RPHITLARRSSKAEIKMET--PISWQVSRLVLMQSISSSEKGNHPEYRILHE 184 >UniRef50_B9ZLA9 2'-5' RNA ligase n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZLA9_9GAMM Length = 173 Score = 143 bits (361), Expect = 3e-33, Method: Composition-based stats. Identities = 55/175 (31%), Positives = 75/175 (42%), Gaps = 3/175 (1%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL 60 MS +R+F A+ RE + P GRP+ +LHLTLAF G + A + + Sbjct: 1 MSNRRRVFIALWPDEATREMLDEEAKRLGGP--GRPIPKAHLHLTLAFAGTIPATQVDCI 58 Query: 61 SLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 + G + Q F LTLD G + R+RV W+G + P L LA R A G + Sbjct: 59 AREIGMLEQEAFPLTLDRLGHFERARVSWIGPSETPAALDTLAARARDLARACGVTPEDH 118 Query: 121 PFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALT 175 PF PH+TL R A + P + E L S Y L R + Sbjct: 119 PFLPHVTLRRFARPPESDRPEH-PIHWNAAEVALIESGQDGNPGLYQVLARVRFS 172 >UniRef50_A3UI27 Putative uncharacterized protein n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UI27_9RHOB Length = 187 Score = 142 bits (360), Expect = 3e-33, Method: Composition-based stats. Identities = 43/185 (23%), Positives = 70/185 (37%), Gaps = 16/185 (8%) Query: 2 SEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALS 61 + R+F A+ L + +Q A +NLH+TL F GE+ + L Sbjct: 5 TMSLRVFAALPLSDTVADQ---ACAEMTGVPDANWRPRENLHITLCFYGELDEPVIEELD 61 Query: 62 LLAGRIRQPGFTLTLDDAGQWLR--SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 G++R F L L+ AG++ +WLG+ + L+ LA R A ++G Sbjct: 62 SALGQVRLAPFELRLEGAGRFGGGDPSAIWLGV-EHHPALMDLARQCRKAARQAGVEIEK 120 Query: 120 RPFHPHITLLRDASE--------AVTIPPPGFNWSYAVTEFTLYASS-FARGRTR-YTPL 169 R + PH+TL + + + V F LY+S Y Sbjct: 121 RAYLPHLTLAYLNRDVDMGRVQRFEQRLGLFKSVPFTVDRFHLYSSWARKPHTPNLYRIE 180 Query: 170 KRWAL 174 + L Sbjct: 181 TEYPL 185 >UniRef50_A3VLU9 2'-5' RNA ligase n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VLU9_9RHOB Length = 181 Score = 142 bits (360), Expect = 3e-33, Method: Composition-based stats. Identities = 52/184 (28%), Positives = 72/184 (39%), Gaps = 17/184 (9%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 R F A+DLP IR + +A GR V DNLHLTLAFLGE+ +K + L+ Sbjct: 1 MRAFVALDLPEAIRRPLTRLQAGL---SVGRLVDEDNLHLTLAFLGEIDPQKAQDLAARL 57 Query: 65 GRIRQPGFTLTLDDAGQWL--RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 + LTL + ++ + P + L+ L + +R A +G R F Sbjct: 58 ADLPDAPIELTLTGIDIMGGKKPNLLVMD-AAPTQALVTLQDRVRRIAMDAGIEMERRRF 116 Query: 123 HPHITLLRDASEAVTIPPPGFNW-----------SYAVTEFTLYASSFARGRTRYTPLKR 171 P +TL R T G + TLY S Y PL Sbjct: 117 RPQVTLARFGKVMTTKDERGLAAFLSLNAPYSLPTELADTVTLYRSHLTGDSADYEPLAE 176 Query: 172 WALT 175 + LT Sbjct: 177 FLLT 180 >UniRef50_Q8EP21 ABC transporter permease n=1 Tax=Oceanobacillus iheyensis RepID=Q8EP21_OCEIH Length = 189 Score = 142 bits (360), Expect = 3e-33, Method: Composition-based stats. Identities = 39/189 (20%), Positives = 75/189 (39%), Gaps = 17/189 (8%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGR-PVAADNLHLTLAFLGEVSAEKEKA 59 M F IDLP +++ +I + + + + H+TL FLGE+ ++ Sbjct: 1 MEILSHYFIGIDLPNHVKQNLIEVQQKLPSSFSYKQWTHKFDFHITLTFLGEIDDKQLTN 60 Query: 60 LSLLAGRIRQPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGCF 116 + + + F LTLD G + RV+W G+ L +L + + + Sbjct: 61 VEQYLNNLEKKPFFLTLDQLGVFGNQKQPRVLWAGLEHSNE-LHELHHQISHMLTQLELS 119 Query: 117 QSNRPFHPHITLLRDAS-----------EAVTIPPPGFNWSYAVTEFTLYASSFARGRTR 165 + NRP+ PHITL + + + + S+ V L+ + + + Sbjct: 120 KDNRPYRPHITLAKKWNDSTILLDSNQLDRMQQIGQSVETSFEVETIHLFK-IYPQQMPK 178 Query: 166 YTPLKRWAL 174 Y + ++L Sbjct: 179 YQKYRSFSL 187 >UniRef50_A8FGD3 2'-5' RNA ligase n=2 Tax=Bacillus pumilus RepID=A8FGD3_BACP2 Length = 183 Score = 142 bits (360), Expect = 4e-33, Method: Composition-based stats. Identities = 51/185 (27%), Positives = 80/185 (43%), Gaps = 11/185 (5%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL 60 MSE + F I +P ++ QI + A + H+TL FLG +S E+ K + Sbjct: 1 MSENRHYFIGIHIPEQLASQIKKDIDQRSGLSFQKWTAPHDYHVTLIFLGAISEERLKKI 60 Query: 61 SLLAGRIR--QPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGC 115 L + F+L L++ GQ+ R RV + + L+ L ++ +G Sbjct: 61 IELLEVLSKEAAAFSLELNEVGQFGTKERPRVFFAKPDE-SEPLMLLREKVKEAVLSAGH 119 Query: 116 FQSNRPFHPHITLLRDA----SEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKR 171 RPFHPH+T+ R S A P + V+ TLY R RY +K+ Sbjct: 120 PVEKRPFHPHMTIARKWNADHSFAEQAPLRKEPYVIEVSSITLYEIRP-RETPRYYAIKQ 178 Query: 172 WALTQ 176 +AL + Sbjct: 179 FALHK 183 >UniRef50_D2R085 2'-5' RNA ligase n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R085_9PLAN Length = 189 Score = 142 bits (360), Expect = 4e-33, Method: Composition-based stats. Identities = 40/187 (21%), Positives = 67/187 (35%), Gaps = 15/187 (8%) Query: 3 EPQRLFFAIDLPAEIREQIIHWRATH-FPPEAGRPVAADNLHLTLAFLGEVSAEKEKALS 61 R F A++L + + A V +HLTL FLG+V + + Sbjct: 2 RRIRSFIAVELSGSVIAKAQKLAAAIAGDEAEINWVDTTAMHLTLKFLGDVPETEMNDIC 61 Query: 62 LLAGRIRQ--PGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAA-RSGC 115 + + F L G + + +W+G+R L +L + + G Sbjct: 62 RVVEATAKTVEPFELMFRGIGAFPDLTNPKSLWMGLRGGQEELAELYTAIDVAMKEKLGF 121 Query: 116 FQSNRPFHPHITLLRDA--SEAVTIPPPGFNWS------YAVTEFTLYASSFARGRTRYT 167 + R F PH+T+ R + + S AV E T++AS R Y Sbjct: 122 PRERRAFQPHVTIGRIKHLHDPAGLAEKFAAMSSFDGDLCAVDEVTVFASFLGRSGPTYD 181 Query: 168 PLKRWAL 174 P+ + L Sbjct: 182 PIGSYEL 188 >UniRef50_C1DGI0 2-5 RNA ligase protein n=1 Tax=Azotobacter vinelandii DJ RepID=C1DGI0_AZOVD Length = 176 Score = 142 bits (359), Expect = 4e-33, Method: Composition-based stats. Identities = 62/173 (35%), Positives = 77/173 (44%), Gaps = 4/173 (2%) Query: 3 EPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSL 62 + RLFF + LP E I WR GRPVA NLHLTLAFL E+ L Sbjct: 4 KNLRLFFGLPLPHRQAEAIDRWRREL--GLDGRPVARRNLHLTLAFLDSHPLERLAELQC 61 Query: 63 LAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 L IR F + LD R +V LG Q P L+QLA L+ +G R F Sbjct: 62 LGEGIRGNAFEMKLDRLET-GRHGLVCLGTGQAPEALLQLAGELQRLLRGAGYALDERAF 120 Query: 123 HPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALT 175 PH+TL RD +P ++ + F L+ S+ T Y PL W L Sbjct: 121 WPHLTLARDCRNPP-LPASPPDFRWRAERFVLFHSTSDAQGTLYRPLFHWPLV 172 >UniRef50_Q1ARL5 2',5' RNA ligase n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ARL5_RUBXD Length = 180 Score = 142 bits (359), Expect = 4e-33, Method: Composition-based stats. Identities = 44/180 (24%), Positives = 73/180 (40%), Gaps = 9/180 (5%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 R F AI P E+RE + + P R V +N+HLTL FLGE+S E+ ++ Sbjct: 1 MRAFVAILPPPEVREALSRAARSL-PVIGVRWVRPENIHLTLKFLGEISEEQAPQIASAL 59 Query: 65 GRIRQ--PGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 ++ + F + + G + R+RV+W G+ + L +LA + G + Sbjct: 60 AQVARLRRPFRIEPEGLGAFPSPERARVLWAGVGEGSASLEELAAAVEEALFPLGFGREQ 119 Query: 120 RPFHPHITLLRDASEAVTIPPPGFN---WSYAVTEFTLYASSFARGRTRYTPLKRWALTQ 176 RPF H+TL R + + + L S+ Y L ++ Sbjct: 120 RPFRAHLTLGRARGRPARLEAGRLDPGIPGFTAGSLHLMRSAQGPSGVYYESLAEHPFSE 179 >UniRef50_B4D614 2'-5' RNA ligase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D614_9BACT Length = 179 Score = 142 bits (359), Expect = 4e-33, Method: Composition-based stats. Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 12/180 (6%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 +RLF ++LP R +R + R + + LHLT++F+G+V AE E+ L Sbjct: 3 KRLFVGLELPEGSRHL---FRKLDPQIKGLRWLPPEQLHLTMSFIGDVDAEHEEQLRGNL 59 Query: 65 GRIRQPGFTLTLDDAGQWL--RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 ++R F L + G + R VVW G+ + L L ++ +G +PF Sbjct: 60 AQVRVSPFFLPITGVGAFGGERPSVVWAGVGKGHPHLFALHQHIQDAVLHAGLDPDLKPF 119 Query: 123 HPHITLLRDASEAVTIPPPG-FNWS------YAVTEFTLYASSFARGRTRYTPLKRWALT 175 HPHITL R + P ++ + VT FTL++S + YT R L Sbjct: 120 HPHITLGRARGVSRAALKPFLRDYQESEFDLWKVTSFTLFSSRLTAEGSIYTVELRQELQ 179 >UniRef50_B4S0B5 2,5 RNA ligase n=2 Tax=Alteromonas macleodii RepID=B4S0B5_ALTMD Length = 217 Score = 142 bits (359), Expect = 4e-33, Method: Composition-based stats. Identities = 48/202 (23%), Positives = 81/202 (40%), Gaps = 30/202 (14%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGR----------------------------- 35 R F +DL A + + WR P R Sbjct: 1 MRSFIGLDLSATEKLALDSWRQQALPEIMPRQWVKNESSRSRKSGNKRNNHNSGQGPSLP 60 Query: 36 -PVAADNLHLTLAFLGEVSAEKEKALSLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQ 94 V A N H+TL+FLGE++ + +AL ++ F+LTL+ G W ++++ Sbjct: 61 YAVPAANFHITLSFLGEINHRQHEALVYELDQLVSEPFSLTLNATGLWNGPKILFAAPTD 120 Query: 95 PPRGLIQLANMLRSQAARSGCFQSNRPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTL 154 P+ L +LA + R A ++ NR + PH+T++R A+ + +P + V+ F L Sbjct: 121 TPKALSELAKLSRKAARKAAIEVENREYKPHVTVVRKATSTLPLPLYSPSVDVHVSAFHL 180 Query: 155 YASSFARGRTRYTPLKRWALTQ 176 + S Y + W L Sbjct: 181 FESVTTPQGVTYPVRQSWPLKH 202 >UniRef50_B8GVT8 2'-5' RNA ligase n=2 Tax=Caulobacter vibrioides RepID=B8GVT8_CAUCN Length = 179 Score = 142 bits (359), Expect = 5e-33, Method: Composition-based stats. Identities = 45/180 (25%), Positives = 72/180 (40%), Gaps = 14/180 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF AI +P +I + ++ + E R + H+TL F+G+V+ + L Sbjct: 2 IRLFTAIAIPPQIGQGLLPRQ---GGIEGARWRPLEAFHITLRFVGDVAEDLAADLDEAL 58 Query: 65 GRIRQPGFTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 +I P F L L AG + VW G+ + L QL A +G +R Sbjct: 59 AQITAPAFDLELASAGHFGEGADIHAVWAGVDE-SAPLRQLQKSHERAARTAGLKPESRL 117 Query: 122 FHPHITLLRDASE-------AVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 + PH+TL + + S+ V F LY+S R + Y + + L Sbjct: 118 YTPHVTLAYLKRPSVPEVGAWLQANNLLRSPSFRVDRFGLYSSWQTREGSAYRLEREYLL 177 >UniRef50_A1SVM8 2'-5' RNA ligase n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SVM8_PSYIN Length = 174 Score = 142 bits (358), Expect = 5e-33, Method: Composition-based stats. Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 5/174 (2%) Query: 4 PQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 +RLF I L + +Q+ +A A R V A NLH+TL FLG + + ++ L Sbjct: 2 TKRLFLGIALDKQQTQQLSKLQANFDS--AVRLVPAANLHMTLLFLGLIDDKTQQQLEEQ 59 Query: 64 AGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 + +P F L+LD W + +++ L + L++LA + + + ++ PF Sbjct: 60 ISLMDKPKFNLSLDKLDHWAKPKILCLTGQIDDPALLKLAKNCSALSTQFKLYKDENPFT 119 Query: 124 PHITLLRDASEAVTIPPPGFNWS---YAVTEFTLYASSFARGRTRYTPLKRWAL 174 PHITL R A + L+ S +Y L+ W L Sbjct: 120 PHITLARKAKYLPENMSTSVDIQPLLLTPKTLHLFHSQSTIEGVKYQILRSWNL 173 >UniRef50_Q2S292 2'-5' RNA ligase n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S292_SALRD Length = 179 Score = 142 bits (358), Expect = 5e-33, Method: Composition-based stats. Identities = 41/181 (22%), Positives = 61/181 (33%), Gaps = 13/181 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF AIDLP R ++ +A R H+TL F+G+ S E+ Sbjct: 1 MRLFTAIDLPDGFRNEVADLQAP--SALDTRWTDPAQFHVTLRFIGDASPERAARYEQAL 58 Query: 65 GRIRQPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 + P RV+ LG+ + L+ L + R G +R Sbjct: 59 ADLTAPAARCEPYGLDVLPSRRSPRVLVLGLER-TESLLALHTAVGDALEREGLSPDDRD 117 Query: 122 FHPHITLLRDASEAVTIPPPGFNW-------SYAVTEFTLYASSFARGRTRYTPLKRWAL 174 + PH+TL R A ++ F LY S+ Y P + L Sbjct: 118 YTPHVTLARVGDTAPETVHAFLRTADVPSFPAFQADRFVLYESTLTSDGAVYDPRAIYPL 177 Query: 175 T 175 Sbjct: 178 N 178 >UniRef50_Q46QC5 2',5' RNA ligase n=4 Tax=Cupriavidus RepID=Q46QC5_RALEJ Length = 193 Score = 142 bits (358), Expect = 6e-33, Method: Composition-based stats. Identities = 47/179 (26%), Positives = 69/179 (38%), Gaps = 14/179 (7%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF A+D P EI +++ + R +HLTL FLGE AE+ + + Sbjct: 3 RLFIAVDAPPEIAARLV---KSVPTASGIRAAPTGQVHLTLRFLGECDAEQTERIRAALD 59 Query: 66 RIRQPGFTLTLDDAGQWLRSR--VVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 +R FTL + G++ + V+W GM P L L + + G R F Sbjct: 60 AVRAADFTLNVAGVGRFRGRQGSVLWAGM-APCPELDALYVAITAALQSVGIAPEPRRFR 118 Query: 124 PHITLLRDA--------SEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 PH+TL R E + + F LY S R + + W L Sbjct: 119 PHLTLARCRPTAPEVLQREWLANHRDMAVPPWHARRFVLYESRLERQGATHAEIGSWPL 177 >UniRef50_Q3A1W4 2'-5' RNA ligase n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A1W4_PELCD Length = 192 Score = 141 bits (357), Expect = 7e-33, Method: Composition-based stats. Identities = 45/185 (24%), Positives = 70/185 (37%), Gaps = 13/185 (7%) Query: 3 EPQRLFFAIDLPAEIREQIIHWRATHFPP-EAGRPVAADNLHLTLAFLGEVSAEKEKALS 61 + R F A L + E+I+ + + R V + +HLTLAFLG++S E + + Sbjct: 2 KTVRAFIAAPLDGPVFEKIVRLQQELSAALPSVRWVRPETMHLTLAFLGDISEESLEKIG 61 Query: 62 LLAGRIR--QPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCF 116 I T+ + G + R RVVWLG+ Q L L + + Sbjct: 62 GSMLSIGSVFAPVTVDVGGLGAFPSLKRPRVVWLGL-QNANTLCDLQMTITDMLRQLQVS 120 Query: 117 QSNRPFHPHITLLRDASEAVTIPPPGFNW------SYAVTEFTLYASSFARGRTRYTPLK 170 ++PF PH+TL R I + ++ LY S + P Sbjct: 121 WDDKPFKPHLTLGRCRQPVPAIDQRLAPFMERQCGHLRISRLVLYESQLTARGAIHLPRY 180 Query: 171 RWALT 175 LT Sbjct: 181 ETPLT 185 >UniRef50_B2A6J9 2'-5' RNA ligase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A6J9_NATTJ Length = 186 Score = 141 bits (357), Expect = 7e-33, Method: Composition-based stats. Identities = 46/181 (25%), Positives = 68/181 (37%), Gaps = 13/181 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHF-PPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 R F AI +++ E + + G+ V DN+HLT+ FLG+V L LL Sbjct: 1 MRSFIAIFFNSKVVESLARNQNLCREKGIKGKYVKPDNIHLTVKFLGDVEQNALDKLQLL 60 Query: 64 AGRIRQ-PGFTLTLDDAGQWL---RSRVVWLGMRQPP-RGLIQLANMLRSQA-ARSGCFQ 117 + Q L L G + R RV+W G+ + L Q+ + Q Sbjct: 61 DQELEQIEPLKLRLSHLGVFPGKGRPRVLWQGLSGDDIKDLQQIHQEVEQFTERELKIAQ 120 Query: 118 SNRPFHPHITLLRDASEAVTIP------PPGFNWSYAVTEFTLYASSFARGRTRYTPLKR 171 + F PH+TLLR+ + V +L S YT LKR Sbjct: 121 EKKKFRPHVTLLRNPDIPKGVSIDQISKEELERPEILVDSISLIKSELTPKGPIYTELKR 180 Query: 172 W 172 + Sbjct: 181 F 181 >UniRef50_A6FTX1 2'-5' RNA ligase n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FTX1_9RHOB Length = 186 Score = 141 bits (357), Expect = 8e-33, Method: Composition-based stats. Identities = 50/184 (27%), Positives = 68/184 (36%), Gaps = 15/184 (8%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF AI LP +R + ++ GR V DNLHLTLAFL E +A++ L Sbjct: 1 MRLFVAIGLPDVVRAALSRLQSDLR---VGRLVEPDNLHLTLAFLDEQDLPTAEAVNELL 57 Query: 65 GRIRQPGFTLTLDDAGQWLRSRV-VWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 G IR P F L + + R+R + P L+ L +R +G F Sbjct: 58 GDIRAPAFDLRIAGLDVFDRARPRLVFAASDRPEALVSLRKKVRVAVRDAGVDLPRERFR 117 Query: 124 PHITLLRDASEAVTIPPPGFNW-----------SYAVTEFTLYASSFARGRTRYTPLKRW 172 PH+TL R + F LY S+ Y L + Sbjct: 118 PHVTLARLNRALPQFELDKLGAFLESHGDFSLDPFRTDRFGLYRSTLGPDGPEYDLLAEY 177 Query: 173 ALTQ 176 L Sbjct: 178 MLDD 181 >UniRef50_C6XKV8 2'-5' RNA ligase n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XKV8_HIRBI Length = 179 Score = 141 bits (357), Expect = 8e-33, Method: Composition-based stats. Identities = 40/180 (22%), Positives = 65/180 (36%), Gaps = 13/180 (7%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF A+ +P I E + + + +N HLTL F G V L Sbjct: 4 RLFAALPIPDHISEMLKSMQNGLD---GAKWRHKENFHLTLNFYGNVEDHTAHDLDAALA 60 Query: 66 RIRQPGFTLTLDDAGQWLR--SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 I P TL L D GQ+ +W G+ +++LA+ + + Sbjct: 61 TINLPPITLRLKDVGQFGGFDPHTLWAGVEAN-EHILKLASKCKRPTRELKLHTDKHTYI 119 Query: 124 PHITLLRDA-------SEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ 176 PH+TL SE + + + F LY+S + ++ Y + L + Sbjct: 120 PHVTLAYLKNIPPHIVSEYLQRHAMFETPEFTIDRFALYSSRPGKHQSLYEEEASYPLLE 179 >UniRef50_D0MJ05 2'-5' RNA ligase n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MJ05_RHOM4 Length = 179 Score = 141 bits (356), Expect = 1e-32, Method: Composition-based stats. Identities = 51/181 (28%), Positives = 65/181 (35%), Gaps = 14/181 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF A+DLP + R ++ R P R D HLTL FLG V + L+ Sbjct: 2 LRLFVALDLPEDHRRRLYALRD---PSWKARWATPDQFHLTLRFLGPVEEDLLPELTRTL 58 Query: 65 GRIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 I P F L R RV+ + P L L + + G +RP Sbjct: 59 AEIEAPAFELAPRGLMVLPSLTRPRVLAAAV-DPVPELHALQAEIERRVVDLGFTPEDRP 117 Query: 122 FHPHITLLRDA-------SEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 F PHITL R + + V F LY S RY L R+ L Sbjct: 118 FRPHITLARLKQVPTAAVRSFLQRHRDFALTPFPVRAFHLYESHLHPDGARYEILHRFPL 177 Query: 175 T 175 Sbjct: 178 Q 178 >UniRef50_C4XNB5 2'-5' RNA ligase n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XNB5_DESMR Length = 187 Score = 141 bits (355), Expect = 1e-32, Method: Composition-based stats. Identities = 53/181 (29%), Positives = 69/181 (38%), Gaps = 13/181 (7%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPE--AGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 RLF I LP + A P DN HLTL FLGE A + ++ Sbjct: 3 RLFVGIGLPPAHQAVAAGLVARLRPLACGPATWTRPDNAHLTLKFLGETDAARLPDITAA 62 Query: 64 AGRIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 GR+ F L + G + R RVVW G+ + LA + + AR G R Sbjct: 63 LGRVAFAPFPLAVAGGGFFPSPSRPRVVWAGLAEGADSCRTLAAAVDAALARIGFAVEAR 122 Query: 121 PFHPHITLLR--------DASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRW 172 PF H+TL R D + + V TLY S+ RY L R+ Sbjct: 123 PFAAHLTLGRLRDASRGCDVRGMLAVLGETVWPPATVEALTLYESTLGPQGPRYVALARF 182 Query: 173 A 173 A Sbjct: 183 A 183 >UniRef50_A9B5P6 2'-5' RNA ligase n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B5P6_HERA2 Length = 195 Score = 140 bits (354), Expect = 2e-32, Method: Composition-based stats. Identities = 53/192 (27%), Positives = 75/192 (39%), Gaps = 16/192 (8%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFP-PEAGRPVAADNLHLTLAFLGEVSAEKEKA 59 MSE R F A+DLP I+ Q++ +A R +NLHLTL FLG ++ E Sbjct: 1 MSEQWRCFMALDLPEPIQAQLLAIQAELQQLGLPIRWSKPENLHLTLQFLGNLAVELLPD 60 Query: 60 LSLLAGRI--RQPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSG 114 L +Q TL + G + +VVW G Q P L+QL + ++ G Sbjct: 61 LQTKLNHALTQQTAPTLNCNTWGYFPNASQPQVVWAGFEQWPNDLLQLQQAVVGCSSHIG 120 Query: 115 CFQSNRPFHPHITLLRDASEAVTIPPPGFNWSYAVTEF----------TLYASSFARGRT 164 RP+HPHITL + +++ L S + Sbjct: 121 IIAETRPWHPHITLGYSKERLTKHQIEQLSSQLQASQWPATPAIYPTCQLIRSISQPQAS 180 Query: 165 RYTPLKRWALTQ 176 Y L W L Q Sbjct: 181 SYQTLVTWQLNQ 192 >UniRef50_A7NPU2 2'-5' RNA ligase n=2 Tax=Roseiflexus RepID=A7NPU2_ROSCS Length = 201 Score = 139 bits (350), Expect = 5e-32, Method: Composition-based stats. Identities = 46/184 (25%), Positives = 73/184 (39%), Gaps = 17/184 (9%) Query: 6 RLFFAIDLPAEIREQIIHWRATH-FPPEAGRPVAADNLHLTLAFLGEVSAEKEKALS--L 62 RLF A++LP +RE++ + R V + +HLTL FLG+VS ++ L L Sbjct: 7 RLFIAVELPNALREELTVLQQRLKRDQPPVRWVEPNAMHLTLWFLGDVSGDQVAHLRVAL 66 Query: 63 LAGRIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 + Q + L G + R +V+W+G+ + L + L + G Sbjct: 67 MLAFAGQQAVRVQLGAPGAFPNLQRPQVIWIGLAEGEMHLRVWYDALARRLPSLGFQPDP 126 Query: 120 RPFHPHITLLRDASEAVTIPPPGFNWS-----------YAVTEFTLYASSFARGRTRYTP 168 RPF PH+TL R +A + + + L+ S RYT Sbjct: 127 RPFRPHLTLGRVRRDASAEQQQRLGAALRSLKLPSDHVWDLQRVVLFRSDLRPEGPRYTA 186 Query: 169 LKRW 172 L Sbjct: 187 LAEV 190 >UniRef50_C3X1K9 2'-5' RNA ligase n=1 Tax=Oxalobacter formigenes HOxBLS RepID=C3X1K9_OXAFO Length = 193 Score = 139 bits (350), Expect = 5e-32, Method: Composition-based stats. Identities = 43/173 (24%), Positives = 66/173 (38%), Gaps = 9/173 (5%) Query: 2 SEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALS 61 + +RLF A+ +E++ + AGR +N HLTL FLG L Sbjct: 15 EKTRRLFVALLPDRHTKEKLASVQKKI----AGRKTPPENFHLTLFFLGNQPESILFPLK 70 Query: 62 LLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 R+ F L+LD G + + R+ W+G + P GL+QL N R + Sbjct: 71 NFMDRVTFDPFVLSLDKTGYFSKIRLSWIGPTEIPPGLVQLHNTTRQFLVPAYLEDKRES 130 Query: 122 FHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFA---RGRTRYTPLKR 171 F PH+TL R + + V L S + +Y + Sbjct: 131 FRPHVTLARKSLPPSVK--ITSPVVWTVDRLALMESILSKEPGRHPQYRIMHE 181 >UniRef50_C5V3P4 2'-5' RNA ligase n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V3P4_9PROT Length = 174 Score = 139 bits (350), Expect = 5e-32, Method: Composition-based stats. Identities = 55/169 (32%), Positives = 73/169 (43%), Gaps = 4/169 (2%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 R+FFA+ R + W+ GR + D LH TL FLGEV A + +AL L A Sbjct: 9 RVFFALWPDRTERGGLSGWQPPLLACCGGRVMRTDTLHATLVFLGEVEAVQLEALKLAAA 68 Query: 66 RIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPH 125 + F L D+A W + +V+ R P LI+L L R R + PH Sbjct: 69 EVSVARFELCFDEAHYWGHNHIVYAAPRTLPPQLIELVRELEQNLLRHRFAFERREYKPH 128 Query: 126 ITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 ITLLR+A P + V EF L S + Y L R+ L Sbjct: 129 ITLLRNAHWTDKPLPGMSQVCWHVREFVLLES----AASSYRILARFCL 173 >UniRef50_C1F3J7 2'-5' RNA ligase n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F3J7_ACIC5 Length = 185 Score = 139 bits (350), Expect = 5e-32, Method: Composition-based stats. Identities = 45/183 (24%), Positives = 72/183 (39%), Gaps = 14/183 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEA-GRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 +RLF I +PA +++ R + H+TL F G V+ +E L Sbjct: 2 KRLFTGIAIPAAEVPELLECSEALAAQHGQLRWSERNGWHVTLQFYGMVTTAQEACLRQA 61 Query: 64 AGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 ++R +L + G + R+ V+ + QP L L + + G RP+H Sbjct: 62 LAQVRGSLSSLQIRGIGFFERAGVLLAEV-QPNADLDALQRAVVKVSRACGFLPEERPYH 120 Query: 124 PHITLLRDASEAVTIP------------PPGFNWSYAVTEFTLYASSFARGRTRYTPLKR 171 PH+TL R S + S V+EF LY S +RY ++R Sbjct: 121 PHVTLARRRSRRDQAEWQEILSRTLPHFQEHPSGSVKVSEFVLYESVPGPAGSRYEVMER 180 Query: 172 WAL 174 + L Sbjct: 181 FLL 183 >UniRef50_B9Z7M0 2'-5' RNA ligase n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z7M0_9NEIS Length = 168 Score = 138 bits (349), Expect = 6e-32, Method: Composition-based stats. Identities = 54/170 (31%), Positives = 75/170 (44%), Gaps = 3/170 (1%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLFFAI + G VAA+ LHLTLAFLGEV+ E+ L + Sbjct: 1 MRLFFAIIPDKSTSVSLHANGNLLAKHSRGHVVAAERLHLTLAFLGEVAPERLDELLAVG 60 Query: 65 GRIRQPGFTL-TLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 R+ + T+D G W +VW G QP L +L L+ A++G RP+ Sbjct: 61 ERLPLLAGEVWTIDRVGGWPN-GIVWAGSSQPCLVLSELVAALQQGLAQAGFPTETRPYV 119 Query: 124 PHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWA 173 PH+TLLR A + P + + L S+ +Y L+RW Sbjct: 120 PHVTLLRRARHRLP-PQDISPLPFVLRRVLLMESTLTPQGPQYRELRRWP 168 >UniRef50_A4XK57 2'-5' RNA ligase n=2 Tax=Clostridia RepID=A4XK57_CALS8 Length = 183 Score = 138 bits (349), Expect = 6e-32, Method: Composition-based stats. Identities = 47/183 (25%), Positives = 74/183 (40%), Gaps = 12/183 (6%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFP-PEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 R F ID P ++ QI+ ++ + GR DN HLTL FLGE+ EK + + Sbjct: 1 MRTFIGIDFPKSLKVQIVEVQSFLKSISKKGRWKYIDNFHLTLKFLGEIEYEKVEKIKQA 60 Query: 64 AGR--IRQPGFTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQS 118 + F+L + G + RVV+L L L +++ A G + Sbjct: 61 LEKNLKDFSRFSLKIYSCGYFKGHGNLRVVYLKPDGNLEKLNNLFSLVEDAMAEVGFQRE 120 Query: 119 NRPFHPHITLLRDA---SEAVTIPPPGFNWSY---AVTEFTLYASSFARGRTRYTPLKRW 172 R + PHIT+ +D N+S+ V + L+ S + YTP+ Sbjct: 121 KREYTPHITIAQDVVLNEPFENFQKYVENFSFDEIPVEKVILFLSEEIDRKRVYTPIFHI 180 Query: 173 ALT 175 L Sbjct: 181 ELV 183 >UniRef50_Q28V17 2'5' RNA ligase n=1 Tax=Jannaschia sp. CCS1 RepID=Q28V17_JANSC Length = 178 Score = 138 bits (348), Expect = 8e-32, Method: Composition-based stats. Identities = 47/180 (26%), Positives = 70/180 (38%), Gaps = 13/180 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 R F A+ L + + ++T G+PV +NLHLTLA+LGEVS + + L + Sbjct: 1 MRAFVALPLTDPAIDALTRVQSTL---PTGKPVPEENLHLTLAYLGEVSEDVLETLHDML 57 Query: 65 GRIRQPGFTLTLDDAGQWLR-SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 R P + + G + R + G P L L + A ++G R F Sbjct: 58 SAARLPSADIAFEGLGTFAEMERGLTFGAVAPSDALTALQTKVAQLARQAGVLLPRRRFR 117 Query: 124 PHITLLRDASEAV----TIPPPGFNWSYAVTEFT-----LYASSFARGRTRYTPLKRWAL 174 PH+TL R + V FT LY S+ R+ L + L Sbjct: 118 PHVTLTRANRQPKGPTRDRLASAIGTPIKVPGFTARTANLYESTLTPSGARHEVLASYPL 177 >UniRef50_Q0ABC1 2'-5' RNA ligase n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0ABC1_ALHEH Length = 182 Score = 138 bits (348), Expect = 9e-32, Method: Composition-based stats. Identities = 55/177 (31%), Positives = 75/177 (42%), Gaps = 7/177 (3%) Query: 2 SEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALS 61 + R+FFA+ +R+ + + GRPV +LHLTLAF G V+AE+ L Sbjct: 8 TTRHRVFFALWPDEALRDGLARLARSLR---GGRPVPRGHLHLTLAFAGLVTAEQVACLQ 64 Query: 62 LLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQP--PRGLIQLANMLRSQAARSGCFQSN 119 A +R P FTL L G + R+RV + + P L +LA L G Sbjct: 65 RAAAGVRAPAFTLRLQTLGGFARARVAHVAPDEQDLPPALPELAGQLNRALVACGVPAER 124 Query: 120 RPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ 176 R F PH+TL RDA ++V F L S Y L W L + Sbjct: 125 RGFRPHVTLRRDARPPRPRSVSLP--EWSVDRFVLVESGDRGRPGPYRVLAEWLLQR 179 >UniRef50_A4TU26 2',5' RNA ligase n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TU26_9PROT Length = 177 Score = 137 bits (347), Expect = 1e-31, Method: Composition-based stats. Identities = 47/180 (26%), Positives = 64/180 (35%), Gaps = 12/180 (6%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF + + A R +AA NLH+TL F+GEV + L Sbjct: 2 IRLFVGLA---LPADLAARLAALAGGIPGARWLAARNLHVTLRFIGEVDEGVAEDLHQRL 58 Query: 65 GRIRQPGFTLTLDDAGQWL--RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 I P F + LD G + + R +W G+ L L + + A G +R F Sbjct: 59 HDIHGPAFDVRLDGFGTFGGRKPRALWAGVAA-HPELDSLQSRIEQAARDVGLEAESRKF 117 Query: 123 HPHITLLRDASEAVT------IPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ 176 PH+TL + F VT FTLY S Y L + L Sbjct: 118 TPHVTLAWLKAAPPERIAAFVAHHSPFTALLPVTGFTLYRSHLGGEGAEYEALAEYFLDH 177 >UniRef50_A3XCV9 2'-5' RNA ligase n=2 Tax=Rhodobacterales RepID=A3XCV9_9RHOB Length = 184 Score = 137 bits (347), Expect = 1e-31, Method: Composition-based stats. Identities = 43/183 (23%), Positives = 66/183 (36%), Gaps = 17/183 (9%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 R F + LP + + + + GR V +NLH+TL+FL + + +AL Sbjct: 1 MRCFLGLALPDRVLDLLERLQE---DIPVGRLVPCENLHITLSFLDDQPEARLEALHQEL 57 Query: 65 GRIRQPGFTLTLDDAGQWLR--SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 R+ L L G RV+ + L L LR++A G F Sbjct: 58 LRLEAAPLRLELRGLGVMGGKSPRVLSAEVTAN-AALTALHRHLRAKAQACGITLPRARF 116 Query: 123 HPHITLLRDASEAVTIPPPGFNWS-----------YAVTEFTLYASSFARGRTRYTPLKR 171 PH+TL R + + V + TLY S+ RY L + Sbjct: 117 RPHVTLARFGQRLQPGQLQQIHQLLQHFGGFTTPVFTVQQITLYQSTLLPEGARYEALAQ 176 Query: 172 WAL 174 + L Sbjct: 177 YPL 179 >UniRef50_Q7UM43 Putative uncharacterized protein n=1 Tax=Rhodopirellula baltica RepID=Q7UM43_RHOBA Length = 189 Score = 137 bits (346), Expect = 2e-31, Method: Composition-based stats. Identities = 47/188 (25%), Positives = 67/188 (35%), Gaps = 16/188 (8%) Query: 3 EPQRLFFAIDLPAEIREQIIHWRATHF-PPEAGRPVAADNLHLTLAFLGEVSAEKEKALS 61 + R F AI LP+++ W A P + + V +NLHLTL FLGEV + A+ Sbjct: 2 KTIRTFLAIPLPSDLARTASRWMAETKSPGDGIKWVPDENLHLTLKFLGEVDNVETPAVC 61 Query: 62 LLAGRIR--QPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCF 116 F L L+ A R RV+ + + L L L + A G Sbjct: 62 NTLQAACEDIEPFALVLEGASGIPDLERPRVLTVAVDDATSTLTNLVADLEKRFAAMGYK 121 Query: 117 QSNRPFHPHITLLRDASEAVTIP----------PPGFNWSYAVTEFTLYASSFARGRTRY 166 R + PH+T+ R S + V E + S + Y Sbjct: 122 PEPRDYRPHLTVGRTRSGTRRANSDVINRWRKFEDDEIGEFNVREIHVVGSFLEKHGPTY 181 Query: 167 TPLKRWAL 174 L R L Sbjct: 182 NVLGRVQL 189 >UniRef50_Q0AXI9 Putative integral membrane transport protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AXI9_SYNWW Length = 190 Score = 137 bits (346), Expect = 2e-31, Method: Composition-based stats. Identities = 44/186 (23%), Positives = 68/186 (36%), Gaps = 17/186 (9%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFP-PEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 R F AI +P +++ I + + V +N HLTL FLGE++ E + + Sbjct: 4 LRAFLAITVPDYLKDYAISLKKQLASIATDVKWVERENYHLTLKFLGEINRELTEKIKKD 63 Query: 64 AGRIR--QPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARS-GCFQ 117 + P L ++ G + R RV+WLG+ L L + + G Sbjct: 64 MESVADSCPPLQLEVNKLGVFPNHRRPRVIWLGIEGEMEKLNFLGERVDAHLYTLGGFAA 123 Query: 118 SNRPFHPHITLLRDASEAVTIPPPGF---------NWSYAVTEFTLYASSFARGRTRYTP 168 + H+TL R SE S+ V EF L S + Y Sbjct: 124 EKKR-SFHLTLGRIRSENNKEALLQQLDLINKKVDKISFPVHEFHLMESQLSSRGPTYLL 182 Query: 169 LKRWAL 174 K + L Sbjct: 183 HKSFIL 188 >UniRef50_C0EIB1 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIB1_9CLOT Length = 174 Score = 137 bits (345), Expect = 2e-31, Method: Composition-based stats. Identities = 47/169 (27%), Positives = 71/169 (42%), Gaps = 6/169 (3%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFP-PEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 RLF A+ L + +++ + + G +NLHLTLAFLGE + A + Sbjct: 1 MRLFIAVQLSSPVKDTLCQAIESLKKRSLQGNFTRRENLHLTLAFLGET--ARLAAAKRV 58 Query: 64 AGRIR-QPGFTLTLDDAGQWLRSRV-VWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 ++ P F+LT+ G++ R +W +P L LA L ++ R+G RP Sbjct: 59 LDELKLPPPFSLTISGLGRFRREGGDIWWAGAEPNDALSDLATQLMARLERTGFPVEKRP 118 Query: 122 FHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLK 170 F PH+TL R P V +L S G YT + Sbjct: 119 FKPHLTLGRQV-VLQGRPEELPPVKMEVDRISLMKSERLAGTLTYTEVY 166 >UniRef50_A6FXB0 2',5' RNA ligase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FXB0_9DELT Length = 180 Score = 137 bits (345), Expect = 2e-31, Method: Composition-based stats. Identities = 44/181 (24%), Positives = 69/181 (38%), Gaps = 14/181 (7%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF AIDLP I ++ R R + LHLTL F+GEV + + L G Sbjct: 3 RLFLAIDLPDPIDFELELLR---GGIHGARWQTREQLHLTLHFIGEVDGGEARRLRAALG 59 Query: 66 RIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 + P F L L +G + ++ +W+G R+ L L + + R + Sbjct: 60 ALESPAFELELFGSGVFPPRGQANTLWIGARESDP-LRLLHQRTAAILDAQQLPRERRKY 118 Query: 123 HPHITLLRDASEAVT-------IPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALT 175 PH+T+ R + S+ V LY+S +Y + L Sbjct: 119 TPHVTVARLKRAPAQEVGAWVAAHSSFASPSFPVRAVQLYSSVLTSAGAKYRIDAEFPLG 178 Query: 176 Q 176 + Sbjct: 179 E 179 >UniRef50_Q5UY33 2'-5' RNA ligase n=1 Tax=Haloarcula marismortui RepID=Q5UY33_HALMA Length = 187 Score = 137 bits (345), Expect = 2e-31, Method: Composition-based stats. Identities = 36/187 (19%), Positives = 61/187 (32%), Gaps = 17/187 (9%) Query: 4 PQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 +RLF ++DL + + + + R H+TL FLG+ + ++ + Sbjct: 2 SKRLFVSVDLD-GLGDAVAAVQDRFDGVSGLRLTDPGQAHVTLKFLGDTAPDRVADVVAA 60 Query: 64 AGRI----RQPGFTLTLDDAGQWLR---SRVVWLGMR--QPPRGLIQLANMLRSQAARSG 114 F + G + VVW+G+R Q L L + + G Sbjct: 61 LEAAVEDSGVEPFEADIGGLGVFPSLSYISVVWVGVRDGQGGPELTALHEAIEDRTVAMG 120 Query: 115 CFQSNRPFHPHITLLRDASEAVTIPPPGFNWS-------YAVTEFTLYASSFARGRTRYT 167 + F PH T+ R + VTE L S G Y Sbjct: 121 FDSEDHEFTPHATIARMDHAGGKETVQNIVENDDPDVGCLQVTEIRLKESERGPGGPTYR 180 Query: 168 PLKRWAL 174 ++ +L Sbjct: 181 TVESVSL 187 >UniRef50_A5UJ81 2'-5' RNA ligase, LigT n=3 Tax=Methanobrevibacter smithii RepID=A5UJ81_METS3 Length = 185 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 40/188 (21%), Positives = 75/188 (39%), Gaps = 17/188 (9%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEA-GRPVAADNLHLTLAFLGEVSAEKEKA 59 MS+ R F AIDL + + ++ +A + V +NLH TL F G++ E Sbjct: 1 MSQ-IRSFLAIDLDDDFKPKVNKIIKEFKKIDANIKFVDLNNLHFTLKFFGDIDTEGIDL 59 Query: 60 LSLLAGRIR--QPGFTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARSG 114 +S ++ F + + G + + +V+W+G+ + L+QL + L ++ A G Sbjct: 60 ISKKIEKVADDFEPFNIKISGCGAFPNNNHIKVIWIGV-ESDELLVQLHDKLDNEFAAIG 118 Query: 115 CFQSNRPFHPHITLLRDASEAVTIPPPGFNWSYA--------VTEFTLYASSFARGRTRY 166 + + F H+T+ R S + ++ S+ Y Sbjct: 119 FDKDKK-FSTHLTIGRMKSAKGKNQVRDIIEEFENVEIGEMNISNIAFKKSTLKPSGPIY 177 Query: 167 TPLKRWAL 174 LK + L Sbjct: 178 ENLKTYDL 185 >UniRef50_C1YG14 2'-5' RNA ligase n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YG14_NOCDA Length = 196 Score = 136 bits (344), Expect = 3e-31, Method: Composition-based stats. Identities = 53/182 (29%), Positives = 69/182 (37%), Gaps = 13/182 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPP-EAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 RLF A+D P + + R HLTL FLGEV AL Sbjct: 1 MRLFAALDPPPDTAHALRRAVDRGRGHTPGLRWADPGEWHLTLVFLGEVDEALLPALGDA 60 Query: 64 AGRIR--QPGFTLTLDDAGQWL----RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQ 117 GR F +T + G + R+ V+W G+ L LA+ LR+ AA G Sbjct: 61 LGREARGHRPFRITAEGWGAFPGDLRRASVLWAGLGGDTASLHALADGLRAAAAEVGVPV 120 Query: 118 SNRPFHPHITLLRDASEA-----VTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRW 172 NRP+ PHIT+ R P + V E L S R RY ++ W Sbjct: 121 ENRPYVPHITVARSRPARDLTGTADALGPLPGHGWPVREAHLVESRPERE-DRYRTVRTW 179 Query: 173 AL 174 L Sbjct: 180 RL 181 >UniRef50_Q02P23 2'-5' RNA ligase n=7 Tax=Pseudomonas RepID=Q02P23_PSEAB Length = 182 Score = 136 bits (344), Expect = 3e-31, Method: Composition-based stats. Identities = 70/172 (40%), Positives = 90/172 (52%), Gaps = 4/172 (2%) Query: 3 EPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSL 62 RLFFA+ P + E+I WR P GR VA NLHLTLAFLG+V + + +AL Sbjct: 4 RSLRLFFALPCPPPLAERIGRWRD--DQPLPGRQVATANLHLTLAFLGQVPSARLEALLD 61 Query: 63 LAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 +A I F L LD +W R+ ++ L QPP L++L LRS A RPF Sbjct: 62 MAAAIEAAPFDLCLDRLLRW-RNGILLLAPSQPPGALLRLRRALRSGLAELELPVETRPF 120 Query: 123 HPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 H+TL RDA+ IPPP + + V F+L+ S RY L RWAL Sbjct: 121 SAHLTLARDAAPLEDIPPPP-TFVWQVDHFSLFCSQNDAAGVRYRTLGRWAL 171 >UniRef50_Q9K7T9 ABC transporter (Permease) n=1 Tax=Bacillus halodurans RepID=Q9K7T9_BACHD Length = 186 Score = 136 bits (342), Expect = 4e-31, Method: Composition-based stats. Identities = 40/186 (21%), Positives = 70/186 (37%), Gaps = 15/186 (8%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFPP-EAGRPVAADNLHLTLAFLGEVSAEKEKA 59 M+ F AI LP EI++Q+ + H + ++ H+TL FLG ++ + Sbjct: 1 MTHTH-YFLAISLPDEIKKQLDTFVQRHKQSLPFKKWTHLEDYHITLVFLGAQPHDRLER 59 Query: 60 LSLLAGRI--RQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSG 114 L ++ F + L+ + R R+ W G+R L +++ + Sbjct: 60 LVTACQKLGEHITSFPIQLEGLSTFGQEERPRIFWAGVR-DSAELSAFQQSVKTCCQQEE 118 Query: 115 CFQSNRPFHPHITLLRDASEAVTIPPPGFNWS------YAVTEFTLYASSFARGRTRYTP 168 RP+ PH+TL + + S VT F LY S + Y Sbjct: 119 ISVERRPYRPHVTLAKKWIGKGSFKEVASEVSQPPARLLHVTSFHLYRSHIGKT-PSYEI 177 Query: 169 LKRWAL 174 + + L Sbjct: 178 TESFPL 183 >UniRef50_B9XIZ0 2'-5' RNA ligase n=1 Tax=bacterium Ellin514 RepID=B9XIZ0_9BACT Length = 203 Score = 135 bits (341), Expect = 6e-31, Method: Composition-based stats. Identities = 40/187 (21%), Positives = 68/187 (36%), Gaps = 18/187 (9%) Query: 6 RLFFAIDLPAEIREQIIHWRATHF---PPEAGRPVAADNLHLTLAFLGEVSAEKEKALSL 62 RLF A+ +P ++E++ ++ P + R D HLTL FLG V ++ LS Sbjct: 12 RLFIALPVPEFVKEELKRVQSELRLNLPGGSVRWTRMDQCHLTLRFLGNVPSDAVSELSA 71 Query: 63 LAGRI--RQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQ 117 R P L + G + R RV+W+G+ L L +L + Sbjct: 72 AVKRSCSEFPLVHLKAERIGFFPNERRPRVIWVGVSDDSGNLRALQAVLSKAVSPFTTEV 131 Query: 118 SNRPFHPHITLLRDAS----------EAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYT 167 + F H+TL R + + + + S +R++ Sbjct: 132 DAKIFSGHLTLGRIQNLHARDVKMLGDLARGSTDRIFGEWTADRIDIMRSELGAQGSRHS 191 Query: 168 PLKRWAL 174 L+ L Sbjct: 192 CLESITL 198 >UniRef50_A0LR27 2'-5' RNA ligase n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LR27_ACIC1 Length = 190 Score = 135 bits (341), Expect = 6e-31, Method: Composition-based stats. Identities = 53/188 (28%), Positives = 73/188 (38%), Gaps = 17/188 (9%) Query: 5 QRLFFAIDLPAEIREQII-HWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 R+F A+ PA + + R V D HLTLAF GEVS ++L Sbjct: 1 MRVFAALTPPATAIDHLEHALLGVRRDDVEWRWVLPDRWHLTLAFYGEVSEFTADRVALR 60 Query: 64 AGRI--RQPGFTLTLDDAGQWLRS---RVVWLGMR--QPPRGLIQLANMLRSQAARSGC- 115 R+ RQ L G + R RV+W G+R L +LA+ R+ R+G Sbjct: 61 LERVAGRQAPLQLCFAGVGAFDRPSRARVIWAGVRTIADDGSLARLADRCRAAGRRAGVT 120 Query: 116 -FQSNRPFHPHITLLR------DASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTP 168 Q++R F H+TL R DA + + T L S RY Sbjct: 121 MPQTDRGFRAHLTLARARTNPVDARGFLAALAGYTGPVWTATHLQLIRSFLGPV-PRYET 179 Query: 169 LKRWALTQ 176 L W L+ Sbjct: 180 LGSWPLSD 187 >UniRef50_B0VJL2 Putative uncharacterized protein n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VJL2_9BACT Length = 195 Score = 135 bits (341), Expect = 6e-31, Method: Composition-based stats. Identities = 37/188 (19%), Positives = 68/188 (36%), Gaps = 12/188 (6%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFP--PEAGRPVAADNLHLTLAFLGEVSAEKEK 58 M R F A++LP ++ ++ + P V +NLHLTL F+G+V ++ + Sbjct: 1 MKMMIRTFIALELPKPLKSELGSVVNRYSKTTPPYVNWVKPENLHLTLLFIGDVQPQEIR 60 Query: 59 ALSLLAGR--IRQPGFTLTLDDAGQWL--RSRVVWLGMRQPPRGLIQLANMLRSQAARSG 114 + + + P F + + + ++WL + + +L L + + G Sbjct: 61 IIDEVLAKQLEGFPSFIFRPEGLEFFPSLQPHLLWLKLSSENEDIFKLNRRLLKELSACG 120 Query: 115 CFQSNRPFHPHITLLRDASEAVTIPPPGF------NWSYAVTEFTLYASSFARGRTRYTP 168 + HITL R S + L+ S +YT Sbjct: 121 IEADKKAMKLHITLARLKSSLNPALEREIMSRKIKHEPLYFDCLCLFKSQLFPEGPQYTV 180 Query: 169 LKRWALTQ 176 L R+ L Sbjct: 181 LNRYNLIH 188 >UniRef50_B8CTB7 2'-5' RNA ligase, putative n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CTB7_SHEPW Length = 186 Score = 135 bits (341), Expect = 6e-31, Method: Composition-based stats. Identities = 52/171 (30%), Positives = 76/171 (44%), Gaps = 3/171 (1%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 +R+F L E +QI ++ PE R V + NLH+TLAF G S E AL Sbjct: 19 KRVFLGFALTTEQTKQIEAIQSQL--PENVRLVPSQNLHMTLAFFGYASNETIDALINNI 76 Query: 65 GRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHP 124 + +P FT+ LD W + +++ L L+ +AN ++ A + QS ++P Sbjct: 77 DAMSKPHFTVHLDCIAHWKKPKILCLKGTASDPNLLSIANDSQTIAQKLKLHQSEYHYNP 136 Query: 125 HITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALT 175 HITL R A EAV + L+ S + Y L W LT Sbjct: 137 HITLSRKAKEAVDG-ICYTALTLQPNALHLFESFAGKDGVEYPILHSWHLT 186 >UniRef50_A6AKQ4 2'-5' RNA ligase n=3 Tax=Vibrio harveyi RepID=A6AKQ4_VIBHA Length = 173 Score = 135 bits (341), Expect = 6e-31, Method: Composition-based stats. Identities = 38/173 (21%), Positives = 68/173 (39%), Gaps = 5/173 (2%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPE-AGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 RLFFA+ + ++ + GR +N H+TLAF+GE + E+ + L+ + Sbjct: 1 MRLFFALTFDKTSKSKLKQIQEKLKQHGIVGRYTRKENFHITLAFIGESTQEEFEQLTKI 60 Query: 64 AGRIRQPGFTLTLDDAGQW--LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 ++ +T+D G + ++ WLG+ + + L L + G R Sbjct: 61 LHNLKSSCKHITVDHLGSFYQSGRQLAWLGI-EDNHAVTNLQTELIEALEQDGFATELRH 119 Query: 122 FHPHITLLRDASEAVTIPP-PGFNWSYAVTEFTLYASSFARGRTRYTPLKRWA 173 + PHITL R + + + L S G+ Y + A Sbjct: 120 YVPHITLARHIDKQAPLDDVKISPLPLPIDAIALMESKTVEGKLIYRAIAEVA 172 >UniRef50_Q2RJJ7 2',5' RNA ligase n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RJJ7_MOOTA Length = 185 Score = 135 bits (340), Expect = 6e-31, Method: Composition-based stats. Identities = 41/179 (22%), Positives = 62/179 (34%), Gaps = 17/179 (9%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPE-AGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 RLF AI+ + + +A + V +++HLTL FLGEV + + Sbjct: 1 MRLFIAINFSTAMVASLARLQAELRQLPVPVKWVNPNSIHLTLKFLGEVDPARLEETGKA 60 Query: 64 AGRIRQP--GFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQS 118 R + L + G + RV+W G+ L L + + G Sbjct: 61 LERATMGINPWDLEVKGTGVFPNWRSPRVIWAGVESEAP-LYDLQRQVTQEYLALGFKAD 119 Query: 119 NRPFHPHITLLRDASEAV-----TIPPPGFNWSY---AVTEFTLYASSFARGRTRYTPL 169 F PH+TL R N S+ VT +L S + Y PL Sbjct: 120 T--FTPHLTLGRLRPGVAGGILREKLQSLANVSWGRERVTAVSLMESQLSPRGANYRPL 176 >UniRef50_B5Y8R2 2'-5' RNA ligase n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y8R2_COPPD Length = 174 Score = 135 bits (340), Expect = 7e-31, Method: Composition-based stats. Identities = 43/178 (24%), Positives = 68/178 (38%), Gaps = 15/178 (8%) Query: 5 QRLFFAIDLPAEIREQ-IIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSA-EKEKALSL 62 RLFF I + E+R I + G+ V +NLH+T+ FLGEV + + Sbjct: 1 MRLFFGIPVSEEVRAFYIETLKPQLEAEFIGKFVETENLHITMLFLGEVEKVDFLNEVKE 60 Query: 63 LAGRIRQPGFTLTLDDAGQWLRS-RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 I F +T+ G + R RV+++ + + L + + + + Sbjct: 61 NLKAITH--FQVTVGGYGYFGRPPRVLFMDVTRGIDDLTVVHDAICRSMK-----IRDTR 113 Query: 122 FHPHITLLRDASEAVTIPP-----PGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 F PH+TL R I P +S+ V LY S YT + L Sbjct: 114 FAPHVTLARIKKSPRDIDAVLELMPHKEFSWLVPSVVLYESKLTSKGPIYTVFEEIRL 171 >UniRef50_Q88K67 2'-5' RNA ligase, putative n=6 Tax=Pseudomonas RepID=Q88K67_PSEPK Length = 181 Score = 134 bits (339), Expect = 8e-31, Method: Composition-based stats. Identities = 52/174 (29%), Positives = 73/174 (41%), Gaps = 7/174 (4%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 +RLFFA+ R + WR +G+PV A N H+TL FLG+V + A+ Sbjct: 13 KRLFFALPASDAQRRDLAQWRRGL-NLRSGKPVPAANFHVTLLFLGDVDTAQVPAICAAV 71 Query: 65 GRIRQPGF--TLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 ++ P L LD W R+ + L +Q P L+QL L+ G + R + Sbjct: 72 DQLALPAMAPRLLLDRLQVWQRAGALVLEAQQVPPALLQLVYGLQQALLPLGLEAATREY 131 Query: 123 HPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ 176 PH+TL RD + FTLY S Y PL +W L Sbjct: 132 RPHLTLSRDYRGQPPEASSAPEFYLTARHFTLYESRKGA----YWPLAQWPLAD 181 >UniRef50_C1CXY4 Putative 2`-5` RNA ligase n=1 Tax=Deinococcus deserti VCD115 RepID=C1CXY4_DEIDV Length = 244 Score = 134 bits (339), Expect = 9e-31, Method: Composition-based stats. Identities = 43/177 (24%), Positives = 66/177 (37%), Gaps = 9/177 (5%) Query: 3 EPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSL 62 RLF+A+ +P +I + + R V D +H+TLA+L V+ E+ L Sbjct: 63 RTLRLFYALRVPTDISGPLAEAQRALRGNW--RAVRRDQMHVTLAYLPSVAPERLDDLKR 120 Query: 63 LAGRIRQP--GFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQ 117 L + Q + L G + RV + + GL +LA LR Sbjct: 121 LGALLTQDVVPMEVRLRGTGYFPNEGSPRVWFAKVEA--EGLTELATKLREGIRNLDIQT 178 Query: 118 SNRPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 + PF HITL R A + P F+ + LY S + Y + Sbjct: 179 DDLPFKAHITLARKKGPAPRVAPLTFDLGWQAGHAVLYRSILRKTGPIYETESTFRF 235 >UniRef50_C0N774 2'-5' RNA ligase n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N774_9GAMM Length = 170 Score = 134 bits (338), Expect = 1e-30, Method: Composition-based stats. Identities = 51/170 (30%), Positives = 75/170 (44%), Gaps = 3/170 (1%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 +RLFFA+ R+QI F P+ + + DNLH+TL FLG V A+ A Sbjct: 2 KRLFFALWPDNNSRQQIAQINQQIFFPDIRKLI-PDNLHITLVFLGNVDDAIATAVQQRA 60 Query: 65 GRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHP 124 G I P +L ++ W++ ++V L ++ P+ + QL N L + A RP+ Sbjct: 61 GDIIAPPISLEFNELDYWVKPKIVCLTCQRQPKAVYQLVNALTAMLAEYPVRVEQRPYRA 120 Query: 125 HITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 HITL R A + + F L S RY +RW L Sbjct: 121 HITLARKAKQRPELN--FSPVVINADSFALVESISTEKGVRYQVRERWLL 168 >UniRef50_A7GH44 2'-5' RNA ligase n=10 Tax=Clostridium RepID=A7GH44_CLOBL Length = 178 Score = 134 bits (337), Expect = 1e-30, Method: Composition-based stats. Identities = 43/177 (24%), Positives = 75/177 (42%), Gaps = 5/177 (2%) Query: 3 EPQRLFFAIDLPAEIREQIIHWRA-THFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALS 61 R+F+A+ E +E++I ++ GR +N HLTL F+GEV +K L+ Sbjct: 2 RKTRVFYAVTFYEEAKEKLIEYKNIVVNNSVKGRFTNKNNFHLTLEFIGEVDEKKLSLLT 61 Query: 62 LLAGRIRQPGFTLTLDDAGQWLRSR--VVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 + +++ P + G + R ++WLG+ + + LI L LR+ +G + Sbjct: 62 NILYKLQNPPKEVVTSYIGSFKRRDKEIIWLGIEEN-KCLITLQRELRNLLINNGFQIED 120 Query: 120 RPFHPHITLLR-DASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALT 175 R + PHIT+ R + + L S + Y PL+ L Sbjct: 121 RRYKPHITIGREIVRKGFIEKNIFQPLHIPIASIALMESKRVNNQLVYEPLEEQILV 177 >UniRef50_Q2CG27 2'-5' RNA ligase (Fragment) n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CG27_9RHOB Length = 204 Score = 134 bits (337), Expect = 1e-30, Method: Composition-based stats. Identities = 57/183 (31%), Positives = 76/183 (41%), Gaps = 16/183 (8%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGE-VSAEKEKALSLL 63 R F A+DLPAE + H + +GRPVA +NLH+TLAFLGE V+ + +A Sbjct: 1 MRAFVALDLPAEAVAILGHLQERM---PSGRPVAPENLHMTLAFLGENVAEDVLEAAHDQ 57 Query: 64 AGRIRQPGFTLTLDDAGQWL-RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 IR P + + G R+ V + + L L + S A R+G R F Sbjct: 58 FAAIRLPAPEIEVTGLGTLGARTPAVLVAEARRTAPLEALQGAVASAARRAGLVLERRRF 117 Query: 123 HPHITLLRDASEAVTIPPPGFNW-----------SYAVTEFTLYASSFARGRTRYTPLKR 171 PHITL R S A + F LYAS+ Y L R Sbjct: 118 RPHITLARFRSTADAAALERLRLFLQSEGRFRLDPFIARSFALYASTLTHEGPVYEELAR 177 Query: 172 WAL 174 + L Sbjct: 178 YPL 180 >UniRef50_B4X1Z9 2'-5' RNA ligase n=2 Tax=Alcanivorax RepID=B4X1Z9_9GAMM Length = 171 Score = 134 bits (337), Expect = 1e-30, Method: Composition-based stats. Identities = 44/173 (25%), Positives = 62/173 (35%), Gaps = 9/173 (5%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 R F I + + +Q + GR NLHLTLAFLGE + L Sbjct: 1 MRCFIGIPVTDALADQCVTL-----SHSMGRATPIANLHLTLAFLGEQTQSALSQLHGSL 55 Query: 65 GRIRQ--PGFTLTLDDAGQWLRSRVVWLGMRQPP-RGLIQLANMLRSQAARSGCFQSNRP 121 + P F L+ + + + ++ + L QL + L G RP Sbjct: 56 TELAGENPPFQQLLNRCEPFPQEQGPFMALTGAACPALKQLHHDLWLCLQGYGFSPEERP 115 Query: 122 FHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 F PHITL + G +W V LY S Y PL ++ L Sbjct: 116 FRPHITLAKPGLTQTPFKAIG-DWVLPVNTLVLYRSELGEPFPSYEPLAQFPL 167 >UniRef50_A3ZLX4 2'-5' RNA ligase n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZLX4_9PLAN Length = 189 Score = 134 bits (337), Expect = 2e-30, Method: Composition-based stats. Identities = 46/189 (24%), Positives = 79/189 (41%), Gaps = 16/189 (8%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEA-GRPVAADNLHLTLAFLGEVSAEKEKA 59 M+ R F A+ + E++ + + A + V DN+H+TL+FLG+++ E+ Sbjct: 1 MNVT-RCFIAMAVTDEVKRRAQNLIDKLAASNADVKWVEPDNMHITLSFLGDITPEETID 59 Query: 60 LSLLA--GRIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSG 114 +S A G F + G + R R +WLGM Q Q+ + + + A G Sbjct: 60 VSRAAMRGAESVSSFDFMIGGVGAFPDITRPRTIWLGMTQGHDAFCQMQHAIAEELATIG 119 Query: 115 CFQSNRPFHPHITLLRDAS---------EAVTIPPPGFNWSYAVTEFTLYASSFARGRTR 165 ++ R +HPH+++ R E + E +YAS R + Sbjct: 120 YPETARKYHPHLSIGRIKRLSSQVERLTELLEEHAEFEAGVSPAMEANIYASQLERRGPK 179 Query: 166 YTPLKRWAL 174 YT + R L Sbjct: 180 YTLIGRAEL 188 >UniRef50_A6CQH7 Putative uncharacterized protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CQH7_9BACI Length = 187 Score = 134 bits (337), Expect = 2e-30, Method: Composition-based stats. Identities = 47/188 (25%), Positives = 80/188 (42%), Gaps = 15/188 (7%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFP-PEAGRPVAADNLHLTLAFLGEVSAEKEKA 59 M +P F+A+ LP + +E+I W + R V ++LH+TLAFLG A K Sbjct: 2 MKQPH-YFYAVPLPWQTQEKIEEWISEVSGTLPFQRWVHPEDLHITLAFLGGTDANSLKR 60 Query: 60 LSLLAGRIRQP-GFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGC 115 +R+ F+L + G + R++W + +L + + S + G Sbjct: 61 SIDRIHELRKGFSFSLEIKKLGTFGNTASPRILWTDVSSSSSL-SELRDSVYSACLQEGY 119 Query: 116 FQSNRPFHPHITLLRDAS-------EAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTP 168 RPF+PHIT+ R + + V+EF LY + R +Y Sbjct: 120 ELDKRPFNPHITIARKWKGDGKFNYSMLEPFFLSEPLDFRVSEFVLYRTHPDR-LPKYEV 178 Query: 169 LKRWALTQ 176 ++++ L Q Sbjct: 179 VEKFILNQ 186 >UniRef50_C9PFM9 Putative uncharacterized protein n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PFM9_VIBFU Length = 179 Score = 133 bits (336), Expect = 2e-30, Method: Composition-based stats. Identities = 52/180 (28%), Positives = 75/180 (41%), Gaps = 5/180 (2%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHF-PPEAGRPVAADNLHLTLAFLGEVSAEKEKA 59 M+ R FFA+ AE + Q+ R G +DN HLTL F+GEV++E Sbjct: 1 MNSDLRCFFALTFAAEEKAQLRRERERLKTHATKGTFTHSDNFHLTLEFIGEVASEHLPT 60 Query: 60 LSLLAGRIRQPGFTLTLDDAGQWL--RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQ 117 L L + TL +D G + +++WLG+ Q L+ L LR + A + Sbjct: 61 LKGLLHELECAPMTLHVDHLGHFHIKGRQLIWLGVTQQHD-LMALQAALRMKLADTPFPP 119 Query: 118 SNRPFHPHITLLR-DASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ 176 NRP+ PHITL R + P + V L S + Y L+ L Sbjct: 120 ENRPYVPHITLGRHVMLDTRLSDIPMAPLTLVVHSVALMESKHVDNKLIYDVLEEIRLVD 179 >UniRef50_D2B7J8 2'-5' RNA ligase n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B7J8_STRRD Length = 190 Score = 133 bits (336), Expect = 2e-30, Method: Composition-based stats. Identities = 49/183 (26%), Positives = 72/183 (39%), Gaps = 13/183 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPP-EAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 RLF + LP +R+++ H H R + H+TL+FLGEV L Sbjct: 1 MRLFVGLPLPQRVRDELGHALEPHRAAWPGLRWPDPETWHVTLSFLGEVPETVLPELETR 60 Query: 64 AGRI--RQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSG-CFQ 117 R R TL L AG + R+RV W +R L++LA+ L + A R+G Sbjct: 61 LARAASRYAPMTLLLTGAGAFPSARRARVFWTDVRGCRPRLVRLADSLGAGALRAGAVHA 120 Query: 118 SNRPFHPHITLLRDASEAVTIPP-----PGFNWSYAVTEFTLYASSFARGRTRYTPLKRW 172 R PH+TL R ++A ++ L S RY + + Sbjct: 121 DRRRLRPHLTLARSRADADLQRLVEDFGSFAGTAWEAGSVHLVRSHLGAV-VRYETVAEY 179 Query: 173 ALT 175 L Sbjct: 180 PLV 182 >UniRef50_C3BR82 2'-5' RNA ligase n=3 Tax=Bacillus RepID=C3BR82_9BACI Length = 200 Score = 133 bits (335), Expect = 2e-30, Method: Composition-based stats. Identities = 40/179 (22%), Positives = 71/179 (39%), Gaps = 11/179 (6%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGR-PVAADNLHLTLAFLGEVSAEKEKALSLLA 64 F A+ LP I+E + +++ R V ++ H+TLAFLG + E+ + + Sbjct: 20 HYFLAVTLPDHIKEILENYKEEMKDKLPFRSWVYKEDYHITLAFLGSATQEQLQGIEKGL 79 Query: 65 GRIR-QPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 + + LTL + + R+ W G+++ + L + + + R+G R Sbjct: 80 QLLTNKTELDLTLQNFSIFGLVESPRIFWAGLKEN-QALFDMQKQVHAICERNGFSLETR 138 Query: 121 PFHPHITLLRDASEAVTIPPPGF----NWSYAVTEFTLYASSFARGRTRYTPLKRWALT 175 P+HPHIT+ R T + TLY S +Y + L Sbjct: 139 PYHPHITVARKWMGEETFNLKDLKQLDAIVFQADTITLYESH-VHQTPKYKSVYEIKLQ 196 >UniRef50_D2S8G3 2'-5' RNA ligase n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S8G3_9ACTO Length = 188 Score = 133 bits (335), Expect = 3e-30, Method: Composition-based stats. Identities = 54/184 (29%), Positives = 68/184 (36%), Gaps = 13/184 (7%) Query: 3 EPQRLFFAIDLPAEIREQIIHWRATHFPPEAG-RPVAADNLHLTLAFLGEVSAEKEKALS 61 P+RLFFA+ PAE + A R D HLTL FLG V ++ L Sbjct: 5 RPRRLFFAVTPPAEALADLDQALAPLREMPGAPRWTPPDRWHLTLLFLGAVPPDRVAELV 64 Query: 62 LLAGRIR--QPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCF 116 A P TL L AG++ R +V W G+ GL LA L + A Sbjct: 65 AAAAPAVAATPSMTLQLAGAGRFGSRRRPQVFWAGVTGDGDGLGALAGRLAAVARGLRMP 124 Query: 117 QSNRPFHPHITLLRDAS------EAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLK 170 RPF H+TL R + + VTE L S RY + Sbjct: 125 VEERPFRAHLTLGRWRPGRPGDGDLPDRLAGYRGRDWPVTEVELLESHLGPA-PRYDRVA 183 Query: 171 RWAL 174 W L Sbjct: 184 AWPL 187 >UniRef50_A0NZS8 2'-5' RNA ligase n=2 Tax=Labrenzia RepID=A0NZS8_9RHOB Length = 162 Score = 132 bits (334), Expect = 3e-30, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 57/157 (36%), Gaps = 10/157 (6%) Query: 28 HFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAGRIRQPGFTLTLDDAGQW--LRS 85 R + +N H+TL F+G++ + RIR+ + L+ G + + Sbjct: 6 RGGLRGARWIDPENYHITLRFIGDIDDRTADEVVAALDRIRRDPVEIRLNGLGSFGNGKP 65 Query: 86 RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPHITLLRDA-------SEAVTI 138 VW + +P L +L R R + PH+TL R ++ ++ Sbjct: 66 HAVWARV-EPTAQLAELQAEQERILQRLHLPAERRKYVPHVTLARCKTSTNEDVAKWLSE 124 Query: 139 PPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALT 175 + F L+++ + G Y + + L Sbjct: 125 RGNFQAQPFIAGRFVLFSAKSSVGGGPYLVEEAYPLA 161 >UniRef50_D1Y2L4 2'-5' RNA ligase n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y2L4_9BACT Length = 194 Score = 132 bits (334), Expect = 3e-30, Method: Composition-based stats. Identities = 45/183 (24%), Positives = 63/183 (34%), Gaps = 14/183 (7%) Query: 6 RLFFAIDLPAEIR-EQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL---- 60 R FF + L E++ E A R VA +LH+TL F GE+ + L Sbjct: 5 RCFFCLPLAPELKKEIAAWIAANRAAISGVRWVAEADLHVTLRFCGEIPQAAAQPLGDRA 64 Query: 61 SLLAGRIRQPGFTLTLDDAGQWLRS-RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 L LTL + G + R RV+W G+ L +L ++ +G Sbjct: 65 KNLLAERCAAPLRLTLRETGTFGRPPRVLWAGLGGDTAALERLNALIEGACRDAGLPPDG 124 Query: 120 RPFHPHITLLRDASEAVTIPPPGFNWS--------YAVTEFTLYASSFARGRTRYTPLKR 171 R F PH+TL R + P + S RY PL Sbjct: 125 RKFSPHLTLARMDASRGFDPAALDALRPWKLAGRGWTADRTIFMRSRLTPAGPRYEPLTV 184 Query: 172 WAL 174 L Sbjct: 185 CRL 187 >UniRef50_C4DT00 2'-5' RNA ligase n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DT00_9ACTO Length = 180 Score = 132 bits (334), Expect = 3e-30, Method: Composition-based stats. Identities = 44/180 (24%), Positives = 66/180 (36%), Gaps = 12/180 (6%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF + + + + RP HLTLAF+GE+ + + +S Sbjct: 1 MRLFVGLRPSDAALADLAGYLPRI-GLDGARPTGRQTWHLTLAFIGELDDRRVEDVSAAL 59 Query: 65 GRIR--QPGFTLTLDDAGQWLR-SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 + GF L L R S + +G L LA +R+ RSG RP Sbjct: 60 TALSRTTAGFALRLAGGTVLGRTSTALCVGTDGDTTALTALAERVRTGLRRSGVPFDERP 119 Query: 122 FHPHITLLRDASEAVTIPPPGFNW-------SYAVTEFTLYASSFARGRTRYTPLKRWAL 174 F PH+T+ R + + S+ + LY S RY L+R+ L Sbjct: 120 FKPHLTVARPKDLSPAEVQAKVDALGGYNGPSWRAEKLVLYRSHPGPP-VRYEALERFPL 178 >UniRef50_UPI0001C42779 2''-5'' RNA ligase n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42779 Length = 188 Score = 132 bits (334), Expect = 3e-30, Method: Composition-based stats. Identities = 36/187 (19%), Positives = 70/187 (37%), Gaps = 15/187 (8%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGR-PVAADNLHLTLAFLGEVS----AE 55 M+E F ++ + AEI+E A + ++LH+TL FLG VS E Sbjct: 1 MNEQH-YFLSVPVSAEIKELYSKHLADLKKQYPFKQWPHPEDLHITLVFLGAVSTKKRQE 59 Query: 56 KEKALSLLAGRIRQPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAAR 112 + ++ FTL + + R++W ++ L +L + Sbjct: 60 LIEQINQTLNSSGLSSFTLRIGGLNTFGNERSPRILWADVQGNLEKLHKLQREINGVCQN 119 Query: 113 SGCFQSNRPFHPHITLLRDASEAVTIPPPGFNWS-----YAVTEFTLYASSFARGRTRYT 167 NRP+ PH+T+ + + ++ + + F L + +Y Sbjct: 120 LDLRTDNRPYRPHMTIAKKWVGQMEFLLSDDPFTESFVEWDIPYFQLIEIHP-KQSPKYK 178 Query: 168 PLKRWAL 174 ++R+ L Sbjct: 179 EIQRFNL 185 >UniRef50_A4XVF3 2'-5' RNA ligase n=1 Tax=Pseudomonas mendocina ymp RepID=A4XVF3_PSEMY Length = 181 Score = 132 bits (333), Expect = 4e-30, Method: Composition-based stats. Identities = 61/173 (35%), Positives = 80/173 (46%), Gaps = 5/173 (2%) Query: 2 SEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALS 61 ++P R FFA+ P + I WRA AG+ VA NLHLTLAFLG A L Sbjct: 3 NDPLRPFFALPCPPHLAAAIGAWRA--DALGAGKAVAVHNLHLTLAFLGSQPASCVAPLL 60 Query: 62 LLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 LA I+ TL LD G W R ++ L Q P+ L +L L ++ + R Sbjct: 61 ALATEIQGERCTLQLDRLGLW-RGGLLHLAPSQVPQALERLQQQLHARLLAASFVLEERA 119 Query: 122 FHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 F PH+TL R P P F+ + + F L+ S TRY L +W L Sbjct: 120 FRPHLTLARHYPNPPNCPAPTFD--WPLRHFALFCSENDGRGTRYRQLGQWPL 170 >UniRef50_Q45633 UPF0097 protein in malA 3'region n=9 Tax=Bacteria RepID=YMA3_BACST Length = 314 Score = 132 bits (333), Expect = 4e-30, Method: Composition-based stats. Identities = 45/186 (24%), Positives = 73/186 (39%), Gaps = 15/186 (8%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGR-PVAADNLHLTLAFLGEVSAEKEKA 59 M F A+ L +E ++ I + R V ++ H+TLAFLG+V K Sbjct: 1 MKRSH-YFIAVPLTSEAKQAISRFSGDASSSLPFRTWVHEEDYHITLAFLGDVPPGKMAP 59 Query: 60 LSLLAGRIRQP--GFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSG 114 L + F+L L G + R+ W G+++ L +L + G Sbjct: 60 LCEAMAAVAAKSAPFSLALAGLGTFGERTAPRIFWQGVKEE-AALNELRRDVYEACLSLG 118 Query: 115 CFQSNRPFHPHITLLRDAS-EAVTIPPPGFNWS-----YAVTEFTLYASSFARGRTRYTP 168 RPF PHIT+ R EA P + ++V E LY ++ + +Y Sbjct: 119 FSLDRRPFAPHITIARKWQGEAPFQPEALRSLPAASTVFSVPEIVLYRTNMEKT-PKYET 177 Query: 169 LKRWAL 174 + + L Sbjct: 178 IAAFPL 183 >UniRef50_Q02C89 2'-5' RNA ligase n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02C89_SOLUE Length = 187 Score = 132 bits (332), Expect = 6e-30, Method: Composition-based stats. Identities = 41/187 (21%), Positives = 64/187 (34%), Gaps = 19/187 (10%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF +DLP E+ + P NLH+T F+GE + L+ Sbjct: 1 MRLFTGLDLPVEVVGNLEELLRRLKPTAQIHWSPPANLHVTTKFIGEWPEARLGELTAAL 60 Query: 65 GRI-RQPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 + + + + G + R+ W G+ P L+ + G R Sbjct: 61 AGVPPRRAIAVNIRRVGFFPNPHSPRIFWCGIEAPGLDLLA--ADTDAATTALGIEPEKR 118 Query: 121 PFHPHITLLRDASEAVTIPPPGFNW-------------SYAVTEFTLYASSFARGRTRYT 167 P+ PH+TL R +A P S+ F LY S+ + YT Sbjct: 119 PYSPHLTLARIKVQANLEQPNLQPLRKTIAALESLEFGSFEARSFFLYRSTLKPTGSVYT 178 Query: 168 PLKRWAL 174 L + L Sbjct: 179 KLAEFPL 185 >UniRef50_A7H7I0 2'-5' RNA ligase n=4 Tax=Anaeromyxobacter RepID=A7H7I0_ANADF Length = 195 Score = 132 bits (332), Expect = 6e-30, Method: Composition-based stats. Identities = 47/191 (24%), Positives = 73/191 (38%), Gaps = 18/191 (9%) Query: 2 SEPQRLFFAIDLPAEIREQIIHWRATHF-----PPEAGRPVAADNLHLTLAFLGEVSAEK 56 + RLF A++ P +R +I A E R V +NLHLT+ FLG V ++ Sbjct: 3 GKTHRLFVALEPPDAVRRRIGARAAALRQAAGRHAEDVRWVPVENLHLTVQFLGAVPEQR 62 Query: 57 EKALSLLAGRIRQ--PGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAA 111 ++++ L + AG + R RV+WLG+ L + + A Sbjct: 63 VESVADGVRAAAAASRPLALEVKGAGGFPNARRPRVIWLGLEGDVEAARALVADVGRRLA 122 Query: 112 RSGCFQSNRPFHPHITLLRDASE--------AVTIPPPGFNWSYAVTEFTLYASSFARGR 163 G RP+ H+TL R A+ + E L S + Sbjct: 123 PLGFAPEARPWAAHLTLGRARDPRGAPGLGGALVARAQEDGIPWRAGELVLVESHLSPKG 182 Query: 164 TRYTPLKRWAL 174 RY P+ + AL Sbjct: 183 PRYEPIVQAAL 193 >UniRef50_A0RYQ5 2'-5' RNA ligase n=1 Tax=Cenarchaeum symbiosum RepID=A0RYQ5_CENSY Length = 175 Score = 131 bits (331), Expect = 8e-30, Method: Composition-based stats. Identities = 49/178 (27%), Positives = 67/178 (37%), Gaps = 16/178 (8%) Query: 5 QRLFFAIDLPAE-IREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 R F A+++ E+I + GR V A+NLH TLAFLGE+ A Sbjct: 1 MRSFVAVEVTDAGALERIASVQRCL--AGWGRQVGAENLHFTLAFLGEIDDAAAAAAGRA 58 Query: 64 AGRIRQPGFTLTLDDAGQWL---RSRVVWLGMRQ-PPRGLIQLANMLRSQAARSGCFQSN 119 G + FT+ G + RVVW G+ + L LA + S G Sbjct: 59 LGSVSFEPFTVLFRGVGAFPSAKSPRVVWAGVDEKGGGALAALARTVCSAL---GVSPDI 115 Query: 120 RPFHPHITLLR-----DASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRW 172 R PH+T+LR D +A+ S V L S R Y+ L Sbjct: 116 RG-RPHLTMLRIGARKDMRDALGGLGGEELGSQRVDHVKLKKSVLTRQGPVYSDLAEV 172 >UniRef50_Q2NI02 Predicted 2'-5' RNA ligase n=1 Tax=Methanosphaera stadtmanae DSM 3091 RepID=Q2NI02_METST Length = 183 Score = 131 bits (331), Expect = 8e-30, Method: Composition-based stats. Identities = 39/185 (21%), Positives = 76/185 (41%), Gaps = 17/185 (9%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGR--PVAADNLHLTLAFLGEVSAEKEKALSL 62 R F AI++ ++ +I + T + + V +N+HLTL F GE++ K+K +S Sbjct: 1 MRAFLAIEIEESLKNKIKKTQQTIKNTNSAKIKYVEDENIHLTLKFFGEINQRKQKQISS 60 Query: 63 LAGRIR--QPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQ 117 + + +T+ L G + R RV+W G++ + L L + + G + Sbjct: 61 IIRKTTENYETYTMKLVKVGAFPNMNRPRVIWTGIKDNDTTIN-LIKELDDEFNKIGFKK 119 Query: 118 SNRPFHPHITLLRDA--------SEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPL 169 + PHIT+ R S + + + + L +S+ Y + Sbjct: 120 E-HDYTPHITIGRVRDVYNKNNLSNILKQLSKTYYGKMNIKKIHLKSSTLTPTGPIYETV 178 Query: 170 KRWAL 174 + + L Sbjct: 179 EEFIL 183 >UniRef50_B0TTJ1 2'-5' RNA ligase n=2 Tax=Shewanella RepID=B0TTJ1_SHEHH Length = 177 Score = 131 bits (331), Expect = 9e-30, Method: Composition-based stats. Identities = 47/174 (27%), Positives = 76/174 (43%), Gaps = 3/174 (1%) Query: 2 SEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALS 61 S+ +R+F L + + II + P + R V + NLH+TLAFLG + + A+ Sbjct: 7 SQTKRVFLGFSLDSLQTQSIIAIQGQL--PNSVRLVPSANLHMTLAFLGAATPAQINAII 64 Query: 62 LLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 ++ +P F++ LD W + +++ L GL Q A + AA G S Sbjct: 65 DSVDKMSRPKFSVMLDSLSHWEKPKILCLRGDATDPGLRQFAQDAQCIAAELGLHCSEYH 124 Query: 122 FHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALT 175 ++PHITL R ++A A ++ L+ S Y L W L Sbjct: 125 YNPHITLAR-KTKAEVRGVDYPPLILAPSQLQLFESYSGLNGVEYPTLHCWQLA 177 >UniRef50_C5CES3 2'-5' RNA ligase n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CES3_KOSOT Length = 208 Score = 131 bits (330), Expect = 1e-29, Method: Composition-based stats. Identities = 40/181 (22%), Positives = 60/181 (33%), Gaps = 13/181 (7%) Query: 2 SEPQRLFFAIDLPAEIREQIIHWRATH-FPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL 60 R F AID + + V N HLTL+FLGE+ K + L Sbjct: 18 GSKLRTFIAIDTGKGVASVVDMVVDKLKRMGFKASWVPGSNAHLTLSFLGEIEFSKVEIL 77 Query: 61 SLLAGR--IRQPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGC 115 + + + P FT + G + RV+W+G+ + L L +R G Sbjct: 78 ASMLSKRLRGFPSFTFSTKQLGFFRHNNLPRVIWIGV-ENTPFLNNLHREVRVALGSLGL 136 Query: 116 FQSNRPFHPHITLLRDASEAVTIPPPGFNWSY-----AVTEFTLYASSFARGRTRYTPLK 170 ++ FHPHIT+ R V +Y S Y + Sbjct: 137 AAEDK-FHPHITVGRMKYSPPYWKKLLATIELEEIVVPVNGVHIYESELLSEGANYRKIF 195 Query: 171 R 171 Sbjct: 196 S 196 >UniRef50_O34570 UPF0097 protein ytlP n=2 Tax=Bacillus subtilis group RepID=YTLP_BACSU Length = 183 Score = 131 bits (329), Expect = 1e-29, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 64/179 (35%), Gaps = 11/179 (6%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 F + +P I I + V + H+TL FLG + K L Sbjct: 7 HYFIGVPIPEGIANPIYQAAKNEPILTFQKWVHPLDYHITLIFLGAADETQIKKLEGSLA 66 Query: 66 RIRQP--GFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 I F++ + + RV+ L ++ + L +L + ++G R Sbjct: 67 EIASEIDPFSIKFGKIDVFGDRRKPRVLHLEPKKN-KTLDRLREHTKQAVLQAGFQVEKR 125 Query: 121 PFHPHITLLRDASE----AVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALT 175 P+HPH+TL R + +P S F+L+ +Y + ++ L+ Sbjct: 126 PYHPHMTLARKWTGEDGFPAHVPFESGEVSMMAERFSLFQIHL-NQSPKYEEIFKFQLS 183 >UniRef50_A8PKT4 2'-5' RNA ligase n=1 Tax=Rickettsiella grylli RepID=A8PKT4_9COXI Length = 197 Score = 131 bits (329), Expect = 2e-29, Method: Composition-based stats. Identities = 51/185 (27%), Positives = 73/185 (39%), Gaps = 12/185 (6%) Query: 3 EPQRLFFAIDLPAEIREQIIHWRATHFPPEAG---RPVAADNLHLTLAFLGEVSAEKEKA 59 +P RLFFA++L +E+R + G R V +NLH+TL FLG EK Sbjct: 5 DPLRLFFAVELNSELRRALSQLIDELKQEPWGHRVRWVQPENLHITLRFLGTTLPEKISE 64 Query: 60 LSLLAGRI--RQPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSG 114 L A + F L L + + R + + P L +LAN L A+ G Sbjct: 65 LVKHAHNAINKIEPFPLQLHNIRFFPSPTAPRAIAADII-PTSELFELANALEEVASNLG 123 Query: 115 CFQSNRPFHPHITLLRDASEAVTIPPPGFNW---SYAVTEFTLYASSFARGRTRYTPLKR 171 +P+ PH+TL R N V E L+ S Y PL+ Sbjct: 124 FTPETKPYLPHLTLGRIIHHHAPNLREELNLNTSPMIVNEIVLFNSKKTEYSQNYAPLEY 183 Query: 172 WALTQ 176 +L + Sbjct: 184 ISLQK 188 >UniRef50_Q9HM49 Putative uncharacterized protein Ta0020 n=2 Tax=Thermoplasma RepID=Q9HM49_THEAC Length = 172 Score = 130 bits (328), Expect = 2e-29, Method: Composition-based stats. Identities = 35/173 (20%), Positives = 60/173 (34%), Gaps = 13/173 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 R F A+ + + + + + + N+HLT+ FLG++ K + Sbjct: 1 MRAFIAVQIKPS--DYLANVFRIFGSIKGIKVTEYGNVHLTIKFLGDIDDGKASEICRGI 58 Query: 65 GRIRQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 I F L + G + R RV++ + GL +L + + Sbjct: 59 SGIEASSFYLETEGIGAFPSLARPRVIY--VECRSDGLYRLLAEVGK------FVPIEKD 110 Query: 122 FHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 F PHIT+ R + Y+V E L+ S YT + L Sbjct: 111 FIPHITIGRVKHKIAMPDIEFKKEKYSVDEVCLFKSELKPSGPIYTRICCKHL 163 >UniRef50_Q1CXV0 2'-5' RNA ligase n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1CXV0_MYXXD Length = 185 Score = 130 bits (328), Expect = 2e-29, Method: Composition-based stats. Identities = 42/186 (22%), Positives = 60/186 (32%), Gaps = 18/186 (9%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFP-PEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 RLF A+ L I + P R V + LHLTL FLG+V + A+ Sbjct: 1 MRLFTAVTLGPAIEARTTEELHRLRPLAPQARWVKLEGLHLTLVFLGDVDDARLPAIREA 60 Query: 64 AGRI--RQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQS 118 I R F L++ G + RV+W + L L G Sbjct: 61 LAPIGARHSPFVLSVVGGGAFGAPTHPRVLWADVCGATDALKALQADAAQVLRPLGFEPE 120 Query: 119 NRPFHPHITLLRDASEAVTIPPPGFNWSY--------AVTEFTLYASSFARGRTRYTPLK 170 +R + H+TL R + V + L+ S Y P Sbjct: 121 HREYTAHLTLARAKHPRGDAALLACVQALKDTSLGEGRVDQLVLFES----KGGHYLPRV 176 Query: 171 RWALTQ 176 LT+ Sbjct: 177 EVPLTR 182 >UniRef50_D1B782 2'-5' RNA ligase n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B782_THEAS Length = 192 Score = 130 bits (328), Expect = 2e-29, Method: Composition-based stats. Identities = 39/189 (20%), Positives = 63/189 (33%), Gaps = 22/189 (11%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPP-EAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 R F + P +R + + + V + +H+TL FLGEV + ++ Sbjct: 1 MRCFACLVPPMGVRCLVSSRLEPFRRAFRSVKWVREELMHVTLLFLGEVPRSEAESFGHR 60 Query: 64 AGRIR--QPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQS 118 + P L+L G + R +W+G+ L A + A G Sbjct: 61 LRDVADSYPPINLSLGGMGAFPSVRSPRAIWVGLGGELDVLSSFAERVARCAPGGG---- 116 Query: 119 NRPFHPHITLLRDASEAVTIPPPGFNWSYAVT------------EFTLYASSFARGRTRY 166 F PH+T+ R + V+ E L S G RY Sbjct: 117 GERFVPHMTVGRVRDGEALGEALDEAGLWEVSFEGDKVCAFSVCEVVLMESHLGPGGPRY 176 Query: 167 TPLKRWALT 175 P +R+ L Sbjct: 177 VPFRRYPLV 185 >UniRef50_B6J032 2'-5' RNA ligase n=6 Tax=Coxiella burnetii RepID=B6J032_COXB2 Length = 184 Score = 130 bits (327), Expect = 2e-29, Method: Composition-based stats. Identities = 39/177 (22%), Positives = 70/177 (39%), Gaps = 4/177 (2%) Query: 3 EPQRLFFAIDLPAEIREQIIHWRATHFPPE-AGRPVAADNLHLTLAFLGEVSAEKEKALS 61 R F A+ L R+Q+ R + +N HLTL FLG+V+ E + L Sbjct: 6 SSIRTFIAVPLFPAERDQLQTAIKPLIKQWTHLRWLPLENWHLTLRFLGDVTPEALEILR 65 Query: 62 LLAGRIRQP--GFTLTLDDAGQWLRSRV-VWLGMRQPPRGLIQLANMLRSQAARSGCFQS 118 + + F + ++ + ++ + + + L QL L A ++G + Sbjct: 66 QATAKEAKETIKFKININKIDIFPPEKLRLLVAYIERQEHLSQLFFNLDQAAEKAGLARE 125 Query: 119 NRPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALT 175 R F PHITL + P + S E ++ S ++Y PL ++ + Sbjct: 126 ERLFLPHITLAKSRRPIRHFDPLDCDLSIHAEELVIFESRPTNDGSQYVPLYKFQFS 182 >UniRef50_D0LIM3 2'-5' RNA ligase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LIM3_HALO1 Length = 298 Score = 130 bits (327), Expect = 3e-29, Method: Composition-based stats. Identities = 48/194 (24%), Positives = 65/194 (33%), Gaps = 23/194 (11%) Query: 6 RLFFAIDLPAEIREQIIHWRATHF-----PPEAGRPVAADNLHLTLAFLGEVSAEKEKAL 60 RLF + L E A R +A N HLTL FLG E AL Sbjct: 9 RLFLGVQLGVEAVRDAAAVAEALRRRASESELAVRWLAPANYHLTLKFLGWTPPEAVTAL 68 Query: 61 SLLAGR--IRQPGFTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARSGC 115 F L G + RV+W G+ GL +LA +L R G Sbjct: 69 RDALAAPIAEVGRFDLIGRGLGAFPEPAQARVLWAGIDDATGGLAELARVLDDACHRLGF 128 Query: 116 FQSNRPFHPHITLLRDASEAVTIPPPGFNW-------------SYAVTEFTLYASSFARG 162 + R +HPH+TL R + + G VT TL+ S Sbjct: 129 AREARAYHPHLTLGRLKTPSDLAALLGEAAGAGAEGVSAQVFRKTPVTAVTLFESVLKSD 188 Query: 163 RTRYTPLKRWALTQ 176 + Y ++ L + Sbjct: 189 GSEYLLRAQFRLAK 202 >UniRef50_C1P948 2'-5' RNA ligase n=1 Tax=Bacillus coagulans 36D1 RepID=C1P948_BACCO Length = 189 Score = 129 bits (326), Expect = 3e-29, Method: Composition-based stats. Identities = 41/183 (22%), Positives = 70/183 (38%), Gaps = 14/183 (7%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPP-EAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 F+A+ LP ++++ A R V D+LH+TLAFLG + + + L Sbjct: 4 HYFYAVLLPEAFKQKLQQATAGLKGSLPFKRWVHRDDLHITLAFLGAAEEAQLEKANRLI 63 Query: 65 GRI--RQPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 L D G + + RV++ G+++ P L L M+ +G Sbjct: 64 ADQIGAFHVLPLVFDHFGTFGKKDEPRVLFAGIQESPP-LSDLETMVAGCCLEAGFSLDR 122 Query: 120 RPFHPHITLLRDASEAVTIPPP------GFNWSYAVTEFTLYASSFARGRTRYTPLKRWA 173 RPFHPH+TL R ++ LY ++ +Y ++ + Sbjct: 123 RPFHPHMTLARKWDGDRPFADGMLDAFSPEPVPFSADRIVLYRTNL-HQTPKYEIVQSFR 181 Query: 174 LTQ 176 L Sbjct: 182 LAD 184 >UniRef50_C9N809 2'-5' RNA ligase n=2 Tax=Streptomyces RepID=C9N809_9ACTO Length = 198 Score = 129 bits (324), Expect = 5e-29, Method: Composition-based stats. Identities = 43/183 (23%), Positives = 68/183 (37%), Gaps = 13/183 (7%) Query: 4 PQRLFFAIDLPAEIREQIIH-WRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSL 62 R+F A+ P ++++ R + R ++ H+TLAFLGE+ L Sbjct: 9 TVRVFVALAPPDRAKDELARELRPAYDTHPHVRWNRIEDWHITLAFLGEIPTATVPLLRP 68 Query: 63 LAGRIR--QPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 R+ L L +G + RV+W G+ L LA +R+ G +R Sbjct: 69 PLARLASAHRPPRLALRGSGTFD-DRVLWTGVDGDLDELHLLAADVRTAVKGCGVAFEDR 127 Query: 121 PFHPHITLLRDASEAVTIPPPGFNW-------SYAVTEFTLYASSFARG-RTR-YTPLKR 171 P PH+TL R + + L S+F R Y ++ Sbjct: 128 PLRPHLTLARARRGDRSSMAEIAEGVAGFDGRRWPAERLHLVGSNFGRSAGPIHYRDIEA 187 Query: 172 WAL 174 WAL Sbjct: 188 WAL 190 >UniRef50_A6TLD2 2'-5' RNA ligase n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TLD2_ALKMQ Length = 182 Score = 129 bits (324), Expect = 5e-29, Method: Composition-based stats. Identities = 43/180 (23%), Positives = 76/180 (42%), Gaps = 10/180 (5%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFP-PEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 R+F AI+L E+++++ + + G+ N HLTL F+GEV + K++ Sbjct: 1 MRVFIAIELEEEVKKKVEKIQKKLKSYAQKGKFTDPGNFHLTLRFIGEVGEAEIKSIKNA 60 Query: 64 AGRIRQPG--FTLTLDDAGQWLRSR--VVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 + F L +D G + + +VW+G++ L L L G + Sbjct: 61 IEKTATKEGFFELVMDQVGSFPKKNKEIVWVGVKGELDRLQNLYKDLEDALEGEGFLKEG 120 Query: 120 RPFHPHITLLRD---ASEAVTIPPPGFNWS--YAVTEFTLYASSFARGRTRYTPLKRWAL 174 R ++PHITL R+ +I +V + +L S G+ Y P+ +L Sbjct: 121 RQYNPHITLGREIVLNRPLPSIQEEIKVMESILSVQKISLMESVRINGKLVYRPIYVKSL 180 >UniRef50_A9IDL0 Putative 2'-5' RNA ligase n=3 Tax=Bordetella RepID=A9IDL0_BORPD Length = 188 Score = 129 bits (324), Expect = 6e-29, Method: Composition-based stats. Identities = 52/165 (31%), Positives = 70/165 (42%) Query: 7 LFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAGR 66 LFFA+ + + W A GR + D LHLTLAFLG V AE+ AL+ R Sbjct: 21 LFFALWPGPALAATLADWAAQAQAACGGRAMRLDTLHLTLAFLGAVDAERAAALAAATAR 80 Query: 67 IRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPHI 126 R + +LD G + R +VW G P L + + L + G + + F PH+ Sbjct: 81 QRAEPGSFSLDRYGTFARQGIVWAGPTLVPPALQRTHDALWNWLEPLGFARPPQAFKPHV 140 Query: 127 TLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKR 171 TLLR A P + + L SS G Y L R Sbjct: 141 TLLRRAPRLDCAPDAPPPVQWQYRRYVLVQSSPQNGVAHYRVLAR 185 >UniRef50_A9HK09 2'-5' RNA ligase n=1 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=A9HK09_GLUDA Length = 179 Score = 128 bits (323), Expect = 6e-29, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 71/182 (39%), Gaps = 16/182 (8%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEV-SAEKEKALSLL 63 RLF AI++ +R+ I R + R + HLTL F+G+V +++ + Sbjct: 1 MRLFVAIEIVPPLRDAIASLRGSL---AGVRWTDPLSYHLTLRFIGDVRDRARQEDIHHA 57 Query: 64 AGRIRQPGFTLTLDDAGQWLRSRVV---WLGMRQPPRGLIQLANMLRSQAARS-GCFQSN 119 IR P TL+ G + + + W+G+ + L+ L + + R+ G Sbjct: 58 LMAIRAPTCTLSPQGPGVFEQEGGLDRLWIGVARSDP-LMHLQRKVDTAIRRAAGLQVER 116 Query: 120 RPFHPHITLLRDASEAVT-------IPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRW 172 R F PH+T+ A T FTL+ S + Y PL + Sbjct: 117 RRFLPHVTIGSVARPPPPVMSAWLTQWGTVPPPPADATHFTLFRSLRGPDQPLYDPLAEY 176 Query: 173 AL 174 L Sbjct: 177 PL 178 >UniRef50_Q65G06 2'_5' RNA ligase YtlP n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65G06_BACLD Length = 201 Score = 128 bits (322), Expect = 8e-29, Method: Composition-based stats. Identities = 39/185 (21%), Positives = 72/185 (38%), Gaps = 11/185 (5%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL 60 MS F I +PAE+ + + ++ R V + H+TL FLG E+ L Sbjct: 1 MSVKPHYFIGIPIPAELSDPLYQTVSSRPEFSFHRWVHPLDYHITLVFLGSAEKEQLAML 60 Query: 61 SLLAGRIR--QPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGC 115 + I F L + G + + R++ + + L + ++ A +G Sbjct: 61 AGSLKLISDETAPFQLAIKRFGTFGKPSEPRILHVEP-EYSAALFHVREQVKHAADAAGF 119 Query: 116 FQSNRPFHPHITLLRDASEAV----TIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKR 171 RPFHPH+T+ R + + + P S+ FT++ + R +Y Sbjct: 120 EIEKRPFHPHVTVARKWNGSASFNGRLEPLEDAVSFTARHFTIFQTHLDR-LPKYEHQAV 178 Query: 172 WALTQ 176 + + Sbjct: 179 FHFGE 183 >UniRef50_A9BEV1 2'-5' RNA ligase n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BEV1_PETMO Length = 202 Score = 128 bits (322), Expect = 1e-28, Method: Composition-based stats. Identities = 41/184 (22%), Positives = 67/184 (36%), Gaps = 12/184 (6%) Query: 2 SEPQRLFFAIDLPAEIREQIIHWRATH-FPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL 60 ++ R F AI+ ++ + A N+HLTL FLG+ EK L Sbjct: 12 TDKLRSFIAIETNEKLEGLLTDLIERFQRMGFKANWTNAKNVHLTLFFLGDQKMEKIAQL 71 Query: 61 S-LLAGRIR-QPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGC 115 + + R+ P F + G + +V+WLG+ + LI L ++ S Sbjct: 72 AYKIGERVSGFPTFHFNIHKMGFFENDSQPKVLWLGIEEDN-TLIGLYEEIKKVLKISEL 130 Query: 116 FQSNRPFHPHITLLRDASEAVTIPPPGFNWSYA-----VTEFTLYASSFARGRTRYTPLK 170 + F PHIT+ R S + ++ V +Y+S R Y L Sbjct: 131 EVKDTNFLPHITVGRVKSFPNHWKELINSVTFDQIQVYVNSIGIYSSELTRKGPIYKKLY 190 Query: 171 RWAL 174 Sbjct: 191 TIDF 194 >UniRef50_C6CZ97 2'-5' RNA ligase n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CZ97_PAESJ Length = 192 Score = 127 bits (321), Expect = 1e-28, Method: Composition-based stats. Identities = 48/193 (24%), Positives = 77/193 (39%), Gaps = 18/193 (9%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGR-PVAADNLHLTLAFLGEVSAEKEKA 59 M++ R+F AI +PA I QI+ + R V +LH+TL F+G++ Sbjct: 1 MADNIRIFTAISIPANITGQIVSHLPDWKNQLSFRKWVDPRDLHITLHFIGDMPVSSIPT 60 Query: 60 LSLLAGRI--RQPGFTLTLDDAGQWL---RSRVVWLGMRQPPRGLIQLANMLRSQAAR-S 113 + R F+L L + R V+WLG++Q P L+ L +L Sbjct: 61 IQAAMQETASRSSSFSLELSKLDCFGREERPSVLWLGIKQLPAELLGLHQLLGQSLHSGI 120 Query: 114 GCFQSNRPFHPHITLLRD----------ASEAVTIPPPGFNWSYAVTEFTLYASSFARGR 163 G RP+ PH+TL R E ++ P ++ +T TLY + Sbjct: 121 GYSPETRPYRPHVTLARKYSADEPCTAGKLEELSSPLLQHQTAFDITGITLYRTRLGER- 179 Query: 164 TRYTPLKRWALTQ 176 Y P+ + Sbjct: 180 PMYEPIASAQFDK 192 >UniRef50_Q6MIS1 Putative 2'-5' RNA ligase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MIS1_BDEBA Length = 209 Score = 127 bits (320), Expect = 1e-28, Method: Composition-based stats. Identities = 48/189 (25%), Positives = 73/189 (38%), Gaps = 18/189 (9%) Query: 4 PQRLFFAIDLPAEIREQIIHWRATH-----FPPEAGRPVAADNLHLTLAFLGEVSAEKEK 58 +RLF A++ + + + + V DN H+T+ FLGE E+ + Sbjct: 2 TRRLFLALNATDPLADTFLPTLKKLKINADRRDMTVKWVPTDNYHVTITFLGERPEEEVQ 61 Query: 59 ALSLLAGRIR--QPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARS 113 ++ + F L ++D G + +RV+WLG+ Q R L Q L + Sbjct: 62 RVADALAHVCQNFAPFDLKIEDVGAFSNEHDARVLWLGV-QNKRSLNQFKEALDRELVDK 120 Query: 114 GCFQ--SNRPFHPHITLLRDASEAVTIPP--PGFNWSY---AVTEFTLYASSFARGRTRY 166 R F PH+T R + P S+ VTE LY S+ Y Sbjct: 121 NLLPQIEERAFSPHLTFGRLRNPRSVKDMISPFKRKSFGKIHVTEIVLYESTLQGAFPVY 180 Query: 167 TPLKRWALT 175 PL R LT Sbjct: 181 KPLARCQLT 189 >UniRef50_A1SDD3 2'-5' RNA ligase n=2 Tax=Nocardioidaceae RepID=A1SDD3_NOCSJ Length = 188 Score = 127 bits (320), Expect = 2e-28, Method: Composition-based stats. Identities = 49/187 (26%), Positives = 74/187 (39%), Gaps = 16/187 (8%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 R+F A+ PAE E + + A R + LH+T+AFL EV + + L Sbjct: 1 MRMFVALVPPAEAVEHLDAFLEPRRSAAAFRWAGVEQLHVTVAFLAEVEERRLEDLVERL 60 Query: 65 --GRIRQPGFTLTLDDAGQWL---RSRVVWLGM---RQPPRGLIQLANMLRSQAARSGCF 116 R+ F + G + R+RV+W G+ L +LA R+ A R+G Sbjct: 61 GRAAARRSAFDTAITGGGAFPNVGRARVLWAGLALDEHGRTQLDRLATGCRTAANRAGVP 120 Query: 117 QSNRPFHPHITLLRDASE-----AVTIPPPGFNWSYAVTEFTLYASSFA---RGRTRYTP 168 + F PH+T+ R A V + ++ L AS RGR RY Sbjct: 121 VDGQRFRPHLTVARIAHPTEATSWVRLLDGYAGPAWRADRVELVASYLGEGPRGRPRYET 180 Query: 169 LKRWALT 175 + L Sbjct: 181 VAELELA 187 >UniRef50_B7GK61 2'-5' RNA ligase n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GK61_ANOFW Length = 188 Score = 127 bits (319), Expect = 2e-28, Method: Composition-based stats. Identities = 47/183 (25%), Positives = 83/183 (45%), Gaps = 13/183 (7%) Query: 2 SEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALS 61 F AI LP E+++Q+ + + P V ++ H+TLAFLG + E+ K ++ Sbjct: 10 GRYMHYFLAISLPNELKKQLHSFISEWKAPFRL-FVHEEDYHITLAFLGRATEEERKQIA 68 Query: 62 LLAGRI--RQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 ++ + F+L L + + SR++W G+++ R L L + + G Sbjct: 69 EYMPKVVRKHRAFSLQLSEVYSFG-SRILWYGVKEESR-LFSLRQDVYDVCRQIGFSLDA 126 Query: 120 RPFHPHITLLRDAS-------EAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRW 172 RPF PHITL + + E G + + V + LY + + +Y PL R+ Sbjct: 127 RPFTPHITLAKKWNGSFPFSLETYPRKIEGEDIRFFVHDVVLYETHMDQT-PKYKPLMRF 185 Query: 173 ALT 175 L+ Sbjct: 186 PLS 188 >UniRef50_Q6AKT9 Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6AKT9_DESPS Length = 172 Score = 127 bits (319), Expect = 2e-28, Method: Composition-based stats. Identities = 48/177 (27%), Positives = 72/177 (40%), Gaps = 17/177 (9%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLF AI LP ++ + + ++ T R V+ LHLTL FLG+V K L Sbjct: 1 MRLFLAIALPRDVEKVLRSYQPT--SEAYIRIVS--QLHLTLHFLGDV---KLAELETAM 53 Query: 65 GRIRQPGFTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 IR F L+LD G + + R +W G+R P L QL + + + + Sbjct: 54 SDIRFKEFKLSLDGLGCFKANGKCRTLWAGVR-PNEALRQLYVRIGKRLEEADFELYSHH 112 Query: 122 FHPHITLLRDASEAVT------IPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRW 172 + PHI+L R + + + V F LY S Y L ++ Sbjct: 113 YSPHISLARCQRKYSEEKIQHFLQIRTEPLEFRVDHFLLYGSEIINNVPFYRALAKY 169 >UniRef50_Q5FPP9 2'-5' RNA ligase n=1 Tax=Gluconobacter oxydans RepID=Q5FPP9_GLUOX Length = 187 Score = 127 bits (319), Expect = 2e-28, Method: Composition-based stats. Identities = 50/179 (27%), Positives = 82/179 (45%), Gaps = 14/179 (7%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEV-SAEKEKALSLL 63 RLF A+DLPA++RE + R + + V A+N H+TL F+GE+ + + + L Sbjct: 1 MRLFVALDLPADVRETLALMRGSM---PGVQWVPAENHHITLRFIGEITDRHRLEEIDLA 57 Query: 64 AGRIRQPGFTLTLDDAGQWLR--SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 R+ F L+L A + + +G+ + R L L + + S R+GC + R Sbjct: 58 LSRLAWQPFELSLAQADIREGLTADSLLIGVER-TRQLDALQSQVESALRRAGCPPAKRR 116 Query: 122 FHPHITLLR-------DASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWA 173 F P ITL DA + V + +V T++ S + G Y P + +A Sbjct: 117 FQPAITLGHFFPNQRADAIKWVQRHNLFRSKPMSVEHVTVFESMRSLGEHVYVPREEYA 175 >UniRef50_Q5WE85 Putative uncharacterized protein n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WE85_BACSK Length = 186 Score = 126 bits (318), Expect = 2e-28, Method: Composition-based stats. Identities = 42/182 (23%), Positives = 70/182 (38%), Gaps = 10/182 (5%) Query: 1 MSEPQRLFFAIDLPAEIREQI-IHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKA 59 M+E F A+ L +I+ I H R + V + HLT F G + A+K Sbjct: 1 MNE-LHYFLALPLSDDIQSAICSHTRRFVHEERFKKWVHPADYHLTYHFFGSLQAKKWAE 59 Query: 60 LSLLAGRIR--QPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSG 114 R+ F L + G + + R+ ++ L+Q + S A+ G Sbjct: 60 TEKELARLTATFTPFVLQFGEYGTFGKEDSPRIFYMKPDPIEDTLVQQHAQVVSLLAQLG 119 Query: 115 CFQSNRPFHPHITLLRDA--SEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRW 172 +RPF PH+T+ R + PP F++S V LY + +Y + + Sbjct: 120 YPVDSRPFSPHVTIARKWVHRKPYVQPPSRFHYSEKVERLCLYK-TVTGQTPKYEEVCSF 178 Query: 173 AL 174 Sbjct: 179 PF 180 >UniRef50_C7DIP0 2'-5' RNA ligase n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIP0_9EURY Length = 181 Score = 126 bits (317), Expect = 3e-28, Method: Composition-based stats. Identities = 42/176 (23%), Positives = 69/176 (39%), Gaps = 11/176 (6%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 R F +I+ E+ +I + + R V D LHLTL F+G ++LS + Sbjct: 1 MRAFASIEPDEELLSKIYALVNSSR-LDGIRIVEKDKLHLTLLFMGNTQRGNLESLSKMI 59 Query: 65 GRIRQPGFTLTLDDAGQWLR--SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 F + + RV++ + + L +L L S A+ G + F Sbjct: 60 ESEHFSKFDICFRGFDVFTHSDPRVLFAKVGEGATVLGELHGRLASMASECGVAFDRKQF 119 Query: 123 HPHITLLRDASEAVTIPPPGFNWSYAVTEF--------TLYASSFARGRTRYTPLK 170 PH+T+ R A + F S+ TEF L S F G++ Y+ + Sbjct: 120 APHLTVGRFAGKVEMAELKVFLDSFEDTEFGCFTCRAIKLKKSEFLEGKSVYSDVY 175 >UniRef50_Q21UK0 2',5' RNA ligase n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21UK0_RHOFD Length = 180 Score = 126 bits (316), Expect = 4e-28, Method: Composition-based stats. Identities = 46/172 (26%), Positives = 69/172 (40%), Gaps = 4/172 (2%) Query: 2 SEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALS 61 + QRLF A+ +++ Q++ P A N H+TL F+G V A++ A+ Sbjct: 9 TRTQRLFLALWPDEDVQGQLVAHARQWTWPAGCVQSAPANWHITLHFIGNVDADRVAAIL 68 Query: 62 LLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 A + F L LD W V LG + P L L L RP Sbjct: 69 ASAD-VPFQPFELVLDQPRLWPHGLAV-LGTTEVPMPLRALYERLGYALRGLDLAVETRP 126 Query: 122 FHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWA 173 + PH+T R + A P + V F L S+ R + Y L+++A Sbjct: 127 YQPHVTFAR-RAGAAIPPAAPAPVVWWVRGFVLVVSTGDRAQP-YRALRQYA 176 >UniRef50_D2L3I4 2'-5' RNA ligase n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L3I4_9DELT Length = 200 Score = 126 bits (316), Expect = 5e-28, Method: Composition-based stats. Identities = 48/195 (24%), Positives = 66/195 (33%), Gaps = 24/195 (12%) Query: 3 EPQRLFFAIDLPAEIREQIIHWRATHFPPE--AGRPVAADNLHLTLAFLGEVS------- 53 + R F I LP ++ A PV A N+HLTL FLG V Sbjct: 2 DHVRAFVGIPLPEACQDLAADLGRRLASLAYGAASPVKAGNIHLTLKFLGNVPVGLATGG 61 Query: 54 ----AEKEKALSLLAGRIRQPGFTLTLDDAGQW---LRSRVVWLGMRQPPRGLIQLANML 106 A++ I FTL L G + R RVVW + LA + Sbjct: 62 ADGGPAGLPAVAEALAGILFAPFTLRLGGGGFFPGPARPRVVWAALADGAGPCHALARAV 121 Query: 107 RSQAARSGCFQSNRPFHPHITLLR--------DASEAVTIPPPGFNWSYAVTEFTLYASS 158 + A G +PF H+TL R D E + + + V TL+ S Sbjct: 122 EAALAPLGFVPEPKPFTAHLTLARLREPGRGGDWPEMLRLLAAAGWPTVPVGSLTLWRSV 181 Query: 159 FARGRTRYTPLKRWA 173 R+ L + Sbjct: 182 LGPAGARHEVLAAFP 196 >UniRef50_UPI00016981C7 2'''',5'''' RNA ligase n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI00016981C7 Length = 168 Score = 126 bits (316), Expect = 5e-28, Method: Composition-based stats. Identities = 44/146 (30%), Positives = 67/146 (45%), Gaps = 9/146 (6%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL 60 MS R FFA+ E+R QI + GR + +LHLTL FLG++ A++ + + Sbjct: 1 MSNS-RAFFALWPDLEVRRQIARVGRSL-NGCGGRMLQPQDLHLTLCFLGDLDAQRRRCV 58 Query: 61 SLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 +A L +D Q+ R+R++W+G + P LI L + L S G N Sbjct: 59 ETVADSFSAAPVVLQIDRIDQFPRARILWVGPLESPPSLITLHDRLSSALQSCGFAPGNP 118 Query: 121 PFHPHITLLRDASEAVTIPPPGFNWS 146 HP AS+ ++ P G W Sbjct: 119 RLHP-------ASDPLSQSPTGRAWQ 137 >UniRef50_D1WYH2 2'-5' RNA ligase n=2 Tax=Streptomyces RepID=D1WYH2_9ACTO Length = 209 Score = 125 bits (315), Expect = 5e-28, Method: Composition-based stats. Identities = 44/187 (23%), Positives = 68/187 (36%), Gaps = 13/187 (6%) Query: 2 SEPQRLFFAIDLPAEIREQIIH-WRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL 60 + R+F A+ P + ++++ R + R ++ H+TLAFLGE+ L Sbjct: 19 TTTTRVFLALAPPDDAKDELAQALRPAYGAHPRMRWNRIEDWHITLAFLGELPVAAVPPL 78 Query: 61 SLLAGRIRQP--GFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQS 118 + L L G + RV+W G+ GL LA +R+ G Sbjct: 79 MAPLAGLAARRRPLRLALHGGGHFD-ERVLWTGIAGDLAGLHHLATDVRALVRECGVSFP 137 Query: 119 NRPFHPHITLLRDAS-------EAVTIPPPGFNWSYAVTEFTLYASSFARG-RTR-YTPL 169 RP PH+TL R EA S+ L S+ RG Y + Sbjct: 138 ERPLRPHLTLARSRRGDQAATVEAAAGIAAFSGRSWEARRLHLVGSNVGRGPGPIHYRDI 197 Query: 170 KRWALTQ 176 W + Sbjct: 198 DAWDFGR 204 >UniRef50_A3TFV9 Putative uncharacterized protein n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TFV9_9MICO Length = 194 Score = 125 bits (315), Expect = 5e-28, Method: Composition-based stats. Identities = 42/187 (22%), Positives = 64/187 (34%), Gaps = 17/187 (9%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFP-PEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 R+F A+ P + + R A H+TLAF+G+V+ + Sbjct: 1 MRVFAAVVPPPVAHADLESFVEVRREVQSELRWTPAHLWHVTLAFMGDVADHAVDDVMEA 60 Query: 64 AGRIR--QPGFTLTLDDAGQWLRS---RVVWLGMR----QPPRGLIQLANMLRSQAARSG 114 L L AG + RVVW+ + L LA +R R G Sbjct: 61 VAEASAGHAPIPLQLSGAGVFPSPDQARVVWMDVLSSAPDGLAELESLALGVRRAVGRVG 120 Query: 115 CFQSNRPFHPHITLLRDASE-----AVTIPPPGFNWSYAVTEFTLYASSF--ARGRTRYT 167 + + PH+TL R + + S+ E T++ S RGR Y Sbjct: 121 AAPAGGDYRPHLTLARSRHPFEATHWLRVMDAYAGPSWIAEEVTVFVSHLGEGRGRPHYE 180 Query: 168 PLKRWAL 174 P+ L Sbjct: 181 PVAVCPL 187 >UniRef50_C7Q269 2'-5' RNA ligase n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q269_CATAD Length = 215 Score = 125 bits (315), Expect = 5e-28, Method: Composition-based stats. Identities = 49/214 (22%), Positives = 74/214 (34%), Gaps = 44/214 (20%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEA------GRPVAADNLHLTLAFLGEVSAEKEK 58 RLF AI P + ++ R + H+T+AF GEVS +K Sbjct: 1 MRLFVAITPPRAVLLEVRAAVDALKRGNTPGVNALLRWTRPETWHITVAFYGEVSEDKAA 60 Query: 59 ALSLLAGRIRQP--GFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCF 116 L GR+ L+L AG++ R +W G++ L +LA + A R Sbjct: 61 DLVDRLGRVAARTTPMELSLAGAGRFG-PRALWFGVQGQCDRLGRLAESAGAAARRCHIR 119 Query: 117 QSNRPFHPHITLLR-----------------DASEAVTIPPPGFNWSYAVTEFTLY---- 155 +RP+ PH+TL R D + V + + E L+ Sbjct: 120 VEDRPYRPHLTLARVNGVPRGVTQDDQTGPLDLAPIVDRLRAFRSPGWLAGEVELFTVAE 179 Query: 156 ------------ASSFARGRT--RYTPLKRWALT 175 + A G RY + W LT Sbjct: 180 VADAPPAANGVNGAHSANGGPYKRYERVAHWPLT 213 >UniRef50_A9KM39 2'-5' RNA ligase n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KM39_CLOPH Length = 176 Score = 125 bits (315), Expect = 6e-28, Method: Composition-based stats. Identities = 41/173 (23%), Positives = 64/173 (36%), Gaps = 8/173 (4%) Query: 5 QRLFFAIDLPAEIREQI-IHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 R+F AI+ EI+ + G +NLHLTLAFLGEV + + L + Sbjct: 1 MRIFIAINFTEEIKHNLYEQILNLKGKSIKGNFTRKENLHLTLAFLGEVDEKHLETLKNV 60 Query: 64 AGRIRQPGFTLTLDDAGQWLRSRVV--WLGMRQPPRGLIQLANMLRSQAARSGCFQSNRP 121 ++ F + L + + + W+G+ P L L L SG + Sbjct: 61 INQLEVSEFPINLSNMSAFHNGDELLPWIGIV-PNTKLQVLQQQLTEGLKASGFAHDEKK 119 Query: 122 FHPHITLLRDASEAVTIPPPGFNW----SYAVTEFTLYASSFARGRTRYTPLK 170 F PH+TL R ++ V ++ S G YT + Sbjct: 120 FTPHVTLGRKVLMKSNTELNRYDGLCGKEIVVNAISIMKSERINGILTYTEIY 172 >UniRef50_A7VYB6 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VYB6_9CLOT Length = 191 Score = 125 bits (314), Expect = 7e-28, Method: Composition-based stats. Identities = 49/183 (26%), Positives = 72/183 (39%), Gaps = 11/183 (6%) Query: 2 SEPQRLFFAIDLPAEIREQIIHWRATHFPP-EAGRPVAADNLHLTLAFLGEVSAEKEKAL 60 + RLF AI +++++ R +NLHLTL FLGE+ + + Sbjct: 4 ASVMRLFLAILFEEPVKDRLCEAMELIRRSTRTSRLTRRENLHLTLVFLGEL--REAGKV 61 Query: 61 SLLAGRIRQPGFTLTLDDAGQWLRSR--VVWLGMRQPPRGLIQLANMLRSQAARSGCFQS 118 IR F L + G++ R + W G+ +P L L L++ A G Sbjct: 62 REAMEEIRTGPFPLEIRGLGRFQRDGGDLYWAGI-EPSLPLQNLYLELKNALAGKGIAVE 120 Query: 119 NRPFHPHITLLRDASEAVTIP-----PPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWA 173 +RP+ PH+TL R A E P +L S GR YT L R Sbjct: 121 DRPYRPHLTLARQAVEKPETPFYTLKNRLEPVKTKAAAVSLMKSERIEGRLVYTELYRKE 180 Query: 174 LTQ 176 L + Sbjct: 181 LRE 183 >UniRef50_A9ILF3 ABC transporter (Permease) n=4 Tax=Bartonella RepID=A9ILF3_BART1 Length = 179 Score = 125 bits (314), Expect = 7e-28, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 66/181 (36%), Gaps = 14/181 (7%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF A+ +P + +Q++ + + + N H+TL+F GEV + L Sbjct: 3 RLFSALQIPQQTTQQLVSLQTAL---PNAQWINPQNFHVTLSFFGEVESSTADVLMHAFD 59 Query: 66 RIRQPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 I+ P F L + + + + + +P L L ++ + R F Sbjct: 60 TIKLPPFMLQMKGFDIFGSENAPHSLVIRI-EPCETLNLLHEKMQRIRSHLRLAPDEREF 118 Query: 123 HPHITLLR-------DASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALT 175 PHIT+ R D ++ + V F L+ S T Y W L Sbjct: 119 TPHITVARLLDIKSEDLPPYLSYRGDFSFPPFEVDHFFLFLSPSPSSDTPYIVKGCWPLQ 178 Query: 176 Q 176 + Sbjct: 179 R 179 >UniRef50_D2LR69 2'-5' RNA ligase n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LR69_BACS4 Length = 178 Score = 125 bits (314), Expect = 7e-28, Method: Composition-based stats. Identities = 44/182 (24%), Positives = 74/182 (40%), Gaps = 10/182 (5%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHF-PPEAGRPVAADNLHLTLAFLGEVSAEKEKA 59 M+ F + + ++ + +I + + V+ ++ HLTL FLG + Sbjct: 1 MNNKHH-FIGVKVSDKVSQVLIGKQEELDVSHYFKKVVSKEDFHLTLLFLGGW-EKTHTL 58 Query: 60 LSLLAGRIRQPGFTLTLDDAGQWLR---SRVVWLGMRQPPRGLIQLANMLRSQAARSGCF 116 L + Q F+LTL+ G + + RV+W G+ Q L L + A SG Sbjct: 59 WERLKMTLTQRTFSLTLNSIGYFGKEAEPRVIWGGVAQ-SDALFNLHKNIICLAQESGFP 117 Query: 117 QSNRPFHPHITLLR--DASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 RPF PHIT+ + AS S+ V L+ + R YT + + L Sbjct: 118 LEKRPFKPHITIAKSLKASSFNQSLYLEQEVSWDVDTLHLFEVNPG-KRPMYTSVSKIEL 176 Query: 175 TQ 176 ++ Sbjct: 177 SR 178 >UniRef50_B3T5E4 Putative uncharacterized protein n=1 Tax=uncultured marine microorganism HF4000_ANIW141I9 RepID=B3T5E4_9ZZZZ Length = 151 Score = 124 bits (313), Expect = 1e-27, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 51/151 (33%), Gaps = 12/151 (7%) Query: 37 VAADNLHLTLAFLGEVSAEKEKALSLLAGRI--RQPGFTLTLDDAGQWL---RSRVVWLG 91 + +DN+H+TL F+G+ + + I + G + R R++WLG Sbjct: 1 MRSDNIHVTLKFIGDTPEDDVDQIGHTIKDIIGSTQSLKFKISGTGCFPKKERPRILWLG 60 Query: 92 MRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPHITLLRDASEAVTIP-------PPGFN 144 + L L + G + + + PH++L R P Sbjct: 61 INGDLLPLQTLVTKINEALDLLGYPKEEKNYTPHLSLARIKYPQKHTPDISSFLNAEYEP 120 Query: 145 WSYAVTEFTLYASSFARGRTRYTPLKRWALT 175 + + S + YT L + LT Sbjct: 121 IQLQINKIHFMRSELFFKGSVYTILDTYFLT 151 >UniRef50_B5H0L7 2',5' RNA ligase n=2 Tax=Streptomyces RepID=B5H0L7_STRCL Length = 194 Score = 124 bits (313), Expect = 1e-27, Method: Composition-based stats. Identities = 49/186 (26%), Positives = 65/186 (34%), Gaps = 17/186 (9%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAG---RPVAADNLHLTLAFLGEVSAEKEKALS 61 RLF A+ P ++ A R H TLAF+GEV LS Sbjct: 1 MRLFAAVLPPPGATAELADAVARLRGLPDAGRLRWTGRAGWHFTLAFMGEVDGAVLPELS 60 Query: 62 --LLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 L R F + + AGQ+ RV+W G G+ LA + AARSG Sbjct: 61 ARLARAARRTRAFGVRMHGAGQFGG-RVLWTGAAGDIDGMRMLAERSYAAAARSGVPMEE 119 Query: 120 RP-FHPHITLLRDASEAVTIP-----PPGFNWSYAVTEFTLYASSFARGR-----TRYTP 168 + H+T+ R + P P + VT L S G RY Sbjct: 120 HRAYRAHLTVARSREDVDLAPFVAGLAPFEGTPWDVTRIALVRSRLPTGGTPGEQPRYET 179 Query: 169 LKRWAL 174 + W L Sbjct: 180 VGAWDL 185 >UniRef50_B4V712 2'-5' RNA ligase n=2 Tax=Streptomyces RepID=B4V712_9ACTO Length = 194 Score = 124 bits (313), Expect = 1e-27, Method: Composition-based stats. Identities = 40/184 (21%), Positives = 63/184 (34%), Gaps = 13/184 (7%) Query: 3 EPQRLFFAIDLPAEIREQIIHWRATHFPP-EAGRPVAADNLHLTLAFLGEVSAEKEKALS 61 R+F A+ P + +E++ + R ++ H+TLAFLGE+ L Sbjct: 8 STVRVFIALAPPDDAKEELARALGPAYDAYPRMRWNRIEDWHITLAFLGELPVGAVALLR 67 Query: 62 LLAGRIRQ--PGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 + L + G + RV+W G+ L LA +R G Sbjct: 68 PPLADLAATRRPVHLAMHGGGHFD-ERVLWSGIEGDLEDLHLLATDVRRVVRECGVEFEE 126 Query: 120 RPFHPHITLLRDASEAVTI-------PPPGFNWSYAVTEFTLYASSFARG-RTR-YTPLK 170 RP PH+TL R + T + L S+ RG Y ++ Sbjct: 127 RPLRPHLTLARSRRDDPTSVTEAAAGLAGFTGRRWEARRLHLVGSNTGRGPGPIHYRDIE 186 Query: 171 RWAL 174 W Sbjct: 187 AWRF 190 >UniRef50_Q7P1N0 2'-5' RNA ligase n=1 Tax=Chromobacterium violaceum RepID=Q7P1N0_CHRVO Length = 174 Score = 124 bits (312), Expect = 1e-27, Method: Composition-based stats. Identities = 50/169 (29%), Positives = 73/169 (43%), Gaps = 4/169 (2%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 R F A P E +++ W+A GRP+ A LHLTLAFL +V+ + + + A Sbjct: 1 MRAFLACLPPPECLARLLAWQAGLRKQAGGRPLPAAQLHLTLAFLDDVTPLQLQLAADCA 60 Query: 65 GRIRQP-GFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 + + LD G W V W G +PP L + L++ +G RP+ Sbjct: 61 EKAAPGLPPAIVLDRCGSWR--GVGWCGPARPPPALGAWVSQLKAALGAAGIAVEARPYR 118 Query: 124 PHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRW 172 PH+TLLR + + + E TL AS G R+ L W Sbjct: 119 PHLTLLRGLERPLPEQALP-PLALPLEEVTLLASELGAGGVRHHRLDGW 166 >UniRef50_C6PE45 2'-5' RNA ligase n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PE45_CLOTS Length = 169 Score = 124 bits (312), Expect = 1e-27, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 67/152 (44%), Gaps = 11/152 (7%) Query: 33 AGRPVAADNLHLTLAFLGEVSAEKEKALSLLAGRIR--QPGFTLTLDDAGQWLRS---RV 87 GR DNLH+TL F GE++ E+ + + I F + L+ G + RV Sbjct: 16 KGRWTNKDNLHITLKFFGEINVEEVNKIREITNNISLSFKSFGIRLNKIGCFEGKDNIRV 75 Query: 88 VWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPHITLLRDASEAVTIPPPGFNWS- 146 +W+ + + L+ L + L ++ +++G + ++ F HIT+ RD + +I + Sbjct: 76 LWVNVV-DDKNLMALHDALETELSKAGYRKDDKKFKTHITIARDITLIKSIEEINSIYKL 134 Query: 147 ----YAVTEFTLYASSFARGRTRYTPLKRWAL 174 + ++ L S + Y P+ L Sbjct: 135 NSDYFMISNIYLMESKLENNKRVYVPIFDVPL 166 >UniRef50_C8WVE5 2'-5' RNA ligase n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WVE5_ALIAD Length = 197 Score = 124 bits (312), Expect = 1e-27, Method: Composition-based stats. Identities = 46/183 (25%), Positives = 75/183 (40%), Gaps = 11/183 (6%) Query: 4 PQRLFFAIDLPAEIREQIIHWRATHFPPEAG---RPVAADNLHLTLAFLGEVSAEKEKA- 59 +RLFF ++LP +++I + D HLT+ FLG V + Sbjct: 2 KRRLFFGLELPDAWKDEIAKRCESIRQQGQVVARNWSRKDLYHLTVLFLGAVDPADLERA 61 Query: 60 -LSLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQ---PPRGLIQLANMLRSQAARS-- 113 L+ Q F LT G++ +SRV WLG+ + L L +R + Sbjct: 62 FLAGERAAGAQAPFRLTTGSFGRFHQSRVFWLGLDEAESDLAELTALHRCVRIAVNAALP 121 Query: 114 GCFQSNRPFHPHITLLRDASEA-VTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRW 172 +RP+ PHITL R+ + S+ TE L+ S+ G+ Y ++R+ Sbjct: 122 SVQIEDRPYRPHITLARELRQFSEPELVAPRPLSHVFTELCLFESTRNGGQLAYPVIRRF 181 Query: 173 ALT 175 + Sbjct: 182 PFS 184 >UniRef50_A7I913 2'-5' RNA ligase n=1 Tax=Candidatus Methanoregula boonei 6A8 RepID=A7I913_METB6 Length = 183 Score = 124 bits (311), Expect = 2e-27, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 58/183 (31%), Gaps = 11/183 (6%) Query: 1 MSEPQ-RLFFAIDLPAEIREQIIHWRATHFPPEA-GRPVAADNLHLTLAFLGEVSAEKEK 58 M R F A ++ E+RE + + T + V +H+T+ FLGEV K Sbjct: 1 MHTVMVRAFVAFEISEEMRELLRAAQDTFKKSSSRLTFVDPPLIHITVKFLGEVDERKIP 60 Query: 59 ALSLLAGRIRQPGFTLTLDDAGQ--WLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCF 116 + I+ F + VW + +G ++ + S A G Sbjct: 61 LVISALNTIKAVPFAAKGSRITVNNFKSPHTVWCAIDDAGKG-REVFGAVESVLAPLGFA 119 Query: 117 QSNRPFHPHITLLRDASEAV------TIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLK 170 + R F PH TL R S V L S+ Y + Sbjct: 120 RETRAFTPHATLARVKVANPALFRCLEEVKTAPCGSCMVAGLKLKKSTLTPNGPVYEDIA 179 Query: 171 RWA 173 A Sbjct: 180 EVA 182 >UniRef50_A8G077 2'-5' RNA ligase n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8G077_SHESH Length = 224 Score = 124 bits (311), Expect = 2e-27, Method: Composition-based stats. Identities = 53/222 (23%), Positives = 72/222 (32%), Gaps = 50/222 (22%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPP----------------------EAGRPVAADNL 42 +RLF I A EQ++ +A F GR V N Sbjct: 2 KRLFLGISPNALQLEQLLKIQAALFEAGDKERTLVGRDADKNSGSHQYTCVGRRVNKQNF 61 Query: 43 HLTLAFLGEVSAEKEKALSLLAGRI------RQPGFTLTLDDAGQWLRSRVVWLGMRQPP 96 H+TLAFLG VS E + L + P F +TLD W + +V+ L + Sbjct: 62 HMTLAFLGAVSDEMQAQLESTLDSFYAINASQWPSFDVTLDTLTLWRKPQVLCLSGKADD 121 Query: 97 RGLIQLANMLRSQAARSGC---------FQSNRPFHPHITLLRDASEAVTIPPPG----- 142 L + R A +G F PHITL R A P Sbjct: 122 PNLQIAVDRCRYAAKEAGLFSGKTNKTKTSDELTFTPHITLFRKAKRIPEDHLPQTGLLQ 181 Query: 143 --------FNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ 176 + + + LY S Y L+ WAL + Sbjct: 182 SELMEKSLIPVTLSPQQMHLYESLSTAKGVEYRILRSWALVK 223 >UniRef50_Q0F3T5 2`-5` RNA ligase, putative n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F3T5_9PROT Length = 198 Score = 123 bits (310), Expect = 2e-27, Method: Composition-based stats. Identities = 49/189 (25%), Positives = 70/189 (37%), Gaps = 18/189 (9%) Query: 1 MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEA---GRPVAADNLHLTLAFLGEVSAEKE 57 MS RLF A+++P I+ +I W +P R V H+TLAF G+VS Sbjct: 1 MSR-MRLFAALEVPEAIKYEINAWWQLAYPRLGPDLWRAVLPHQWHMTLAFYGDVSGRDA 59 Query: 58 KALSLLAGRI--RQPGFTLTLDDAGQWL---RSRVVWLGMR--QPPRGLIQLANMLRSQA 110 L+ + P L L G + R R W G+ L LA R Sbjct: 60 DDLAEMLAVCADASPRLHLCLTGCGIFPQASRPRTFWAGVESLSADPALKHLARCCRRAG 119 Query: 111 ARSGCFQSNR--PFHPHITLLRDASEAV-----TIPPPGFNWSYAVTEFTLYASSFARGR 163 + ++ R PF HITL R PP ++ L+ S Sbjct: 120 HVTVRNRTAREAPFRAHITLARANGHLPALLDLQALPPVPELNWQADHLCLFQSILHADG 179 Query: 164 TRYTPLKRW 172 +Y L+R+ Sbjct: 180 AQYRQLERF 188 >UniRef50_A2SQE0 2'-5' RNA ligase n=1 Tax=Methanocorpusculum labreanum Z RepID=A2SQE0_METLZ Length = 154 Score = 123 bits (309), Expect = 3e-27, Method: Composition-based stats. Identities = 36/142 (25%), Positives = 54/142 (38%), Gaps = 8/142 (5%) Query: 39 ADNLHLTLAFLGEVSAEKEKALSLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRG 98 AD +H+TL FLGE+ K ++ ++R F L + R RV+ + Sbjct: 15 ADQMHITLKFLGEIPEVKIPKIAGALEKVRGAPFQLQAARVSTFGR-RVIKAEVTDQS-C 72 Query: 99 LIQLANMLRSQAARSGCFQSNRPFHPHITLLRDASEAVTIPPPGFNW------SYAVTEF 152 +A + G + RPF PHITL R A + + + E Sbjct: 73 CADIAKQIDGLLLPLGFPKEARPFSPHITLARIKEYAPDLQEKTDALCDAEFGTCMIEEI 132 Query: 153 TLYASSFARGRTRYTPLKRWAL 174 L S+ + YT L R L Sbjct: 133 LLKQSTLTPRGSIYTTLARVKL 154 >UniRef50_D1A6E1 2'-5' RNA ligase n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1A6E1_THECD Length = 187 Score = 123 bits (309), Expect = 3e-27, Method: Composition-based stats. Identities = 44/186 (23%), Positives = 70/186 (37%), Gaps = 16/186 (8%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPP-EAGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 RLF A+ P+ + +++ + + VA D +H+TLAFLGE+ + L Sbjct: 1 MRLFVALIPPSAVLDELDRLLVPYRADWPDLKWVARDKMHITLAFLGEIDERALERLLPR 60 Query: 64 AGRIRQPGFTLTLD------DAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQ 117 R + L G +RV+W G+ L +LA + + R+G Sbjct: 61 LERAAGRHPRIELSFAGAGAFPGGGAHARVLWTGVYGDRGVLARLAASVNAAGRRAGIAV 120 Query: 118 -SNRPFHPHITLLRDASEAVTIPP-----PGFNWSYAVTEFTLYASSF---ARGRTRYTP 168 +R F PH+TL R P ++ L S R RY Sbjct: 121 GEHRAFRPHLTLARSRRPTDMRPLIEGLSAYAGTTWTADTVHLVRSHLPGKGRPGLRYET 180 Query: 169 LKRWAL 174 ++ W L Sbjct: 181 IRDWPL 186 >UniRef50_C8WMV6 2'-5' RNA ligase n=2 Tax=Coriobacteriaceae RepID=C8WMV6_EGGLE Length = 182 Score = 123 bits (309), Expect = 3e-27, Method: Composition-based stats. Identities = 53/175 (30%), Positives = 71/175 (40%), Gaps = 6/175 (3%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 R F A+DLP + + GR + D HLTLAFLG+V + A + Sbjct: 1 MRTFIALDLPPDFADDAAALARRLSASMEGRFLKRDTYHLTLAFLGDVDEAQLAAATDAL 60 Query: 65 GRIR--QPGFTLTLDDAGQWLRSR--VVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR 120 L D G++ R+ +WLG+ P L QLA LR + + Sbjct: 61 EAACAGASPVPLRSDGLGKFGRATDATLWLGIAAAPE-LEQLAARLRDELRARDVPFDAK 119 Query: 121 PFHPHITLLRDAS-EAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 PF H TL R A V +P F + T+ TLY S+ R Y PL L Sbjct: 120 PFKAHFTLARRARIPHVGLPHLAFPQNDEATDVTLYKSTLDRAGAVYKPLHTVCL 174 >UniRef50_C5RP17 2'-5' RNA ligase n=1 Tax=Clostridium cellulovorans 743B RepID=C5RP17_CLOCL Length = 180 Score = 123 bits (309), Expect = 3e-27, Method: Composition-based stats. Identities = 39/180 (21%), Positives = 68/180 (37%), Gaps = 11/180 (6%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPE-AGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 R++ AI + + ++ G +N HLT+ F+GEV + L + Sbjct: 1 MRVYIAIAFEDTVEDYFDKITSSIKEHCTEGSFTRKNNFHLTVRFIGEVDDSQIDRLKEV 60 Query: 64 AGR--IRQPGFTLTLDDAGQWLRSR--VVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 + ++ F L +++ G + R ++W+G + L +L L + Sbjct: 61 LDKSVLKITPFELLVNNLGVFKRKNTNILWIGAEE-SPILSELHKELSILLQEYKIAFYD 119 Query: 120 RPFHPHITLLRDA-----SEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWAL 174 + F PHITL R S+ + V TL AS G+ PL + L Sbjct: 120 KRFMPHITLGRRVVFQENSKDLNDLIQFERIKIPVEAITLMASKEENGKLNGVPLYKVNL 179 >UniRef50_C1TRT5 2'-5' RNA ligase n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TRT5_9BACT Length = 194 Score = 122 bits (307), Expect = 4e-27, Method: Composition-based stats. Identities = 43/184 (23%), Positives = 73/184 (39%), Gaps = 14/184 (7%) Query: 6 RLFFAIDLPAEIREQIIHWR-ATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 R F A+ +P ++R + R V ++LHLTL F GE+ + + L+ Sbjct: 5 RSFLALPIPEKLRVLAEELIVQGRREFRSPRWVRGEHLHLTLRFFGELEEKAYRRLAKSL 64 Query: 65 GRIRQPGFTLT---LDDAGQWLRSR---VVWLGMRQPPRGLIQLANMLRSQAARSGCFQS 118 ++ L + G + R V+W+ + + R + +LA + A +G Sbjct: 65 KTAFSDAPSVEGMALGEVGCFRRKGSISVIWMAVEERDRQITRLAELAEKTAVETGLSPE 124 Query: 119 NRPFHPHITLLRD---ASEAVTIPPPGFNWS----YAVTEFTLYASSFARGRTRYTPLKR 171 RPF PH+TL R + + V WS + V + L S Y+ Sbjct: 125 RRPFRPHMTLARCHGRSEDIVAYDCVRERWSPTPFFPVEKALLLRSELTPTGPIYSVEGE 184 Query: 172 WALT 175 + LT Sbjct: 185 YPLT 188 >UniRef50_UPI000196B731 hypothetical protein CATMIT_00742 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B731 Length = 352 Score = 122 bits (307), Expect = 5e-27, Method: Composition-based stats. Identities = 43/168 (25%), Positives = 75/168 (44%), Gaps = 9/168 (5%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPE-AGRPVAADNLHLTLAFLGEVSAEKEKALSLL 63 R F A+ + +E+++H + G+ DNLH+TLAF GE + ++ + + Sbjct: 7 MRQFIALTFNSSFKEELVHIIDSLKEEGIKGKYYDPDNLHMTLAFFGETN--RQDEIMEI 64 Query: 64 AGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFH 123 I P T+T + G + + + W+G+++ P L N LR+ + ++PF+ Sbjct: 65 IQSIPFPEITITTNRIGHFKK--IYWVGVKENPE-LDAYVNTLRNTLKQHDIPFDDKPFY 121 Query: 124 PHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKR 171 PHIT+LR A E V L + + +Y P K Sbjct: 122 PHITILRKAEEGDRTLQEVSTKDIKVE---LLQAHYLEEGLKYLPYKE 166 >UniRef50_Q2BKJ4 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BKJ4_9GAMM Length = 186 Score = 121 bits (305), Expect = 9e-27, Method: Composition-based stats. Identities = 40/183 (21%), Positives = 64/183 (34%), Gaps = 10/183 (5%) Query: 4 PQRLFFAIDLPAEIREQIIHWRATH---FPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL 60 R FFA+ LP + + T V +D HLTL+FLG++ + + L Sbjct: 2 KIRAFFALTLPDSVVRWLADHADTLCEYDKKTEVNWVDSDRYHLTLSFLGDIELGQVEDL 61 Query: 61 SLLAGRIRQP--GFTLTLDDAGQWL--RSRVVWLGMRQPPRGLIQLANMLRSQAARSGCF 116 A F + ++ A + + + + L QL ++ A ++G Sbjct: 62 EACARECLADFCSFQVHINAAEYYRVSKKLALIAALPDVHEELQQLHDLTVDVAKKAGVT 121 Query: 117 QSNRPFHPHITLLRDASEAVTIPPP-GFNWSY--AVTEFTLYASSFARGRTRYTPLKRWA 173 F PHITL R + P + L+ S + YTPL Sbjct: 122 YEEEDFKPHITLGRLPGKNGFKSPEKWPDLDMFSLADSVVLFQSKPGEDGSIYTPLFEIP 181 Query: 174 LTQ 176 L Sbjct: 182 LKD 184 >UniRef50_C7HZ61 2'-5' RNA ligase n=1 Tax=Thiomonas intermedia K12 RepID=C7HZ61_THIIN Length = 186 Score = 120 bits (302), Expect = 2e-26, Method: Composition-based stats. Identities = 56/174 (32%), Positives = 72/174 (41%), Gaps = 5/174 (2%) Query: 5 QRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 RLFFA+ +R I + RP AA LHLT+ F+ V A++ L + Sbjct: 16 LRLFFALWPGQALRRHIAEHQTLWQWAPPARPAAAAKLHLTVLFMDRVPADQVTTLLEVG 75 Query: 65 GRIR--QPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPF 122 R+ F LTLD A W + L QPP L+ L L Q + G R F Sbjct: 76 ERVARNWADFALTLDRAAVWHHGGIAHLAPSQPPAELLWLRAALAEQVGQRGLPFDARAF 135 Query: 123 HPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ 176 PH+TL R A A P + V F L S G RY + RW L + Sbjct: 136 APHVTLARRAQ-ATQPPIAFPPLHWTVRGFALVHSVLGTG--RYDVIGRWPLNR 186 >UniRef50_Q12C65 2',5' RNA ligase n=1 Tax=Polaromonas sp. JS666 RepID=Q12C65_POLSJ Length = 166 Score = 120 bits (301), Expect = 2e-26, Method: Composition-based stats. Identities = 37/167 (22%), Positives = 59/167 (35%), Gaps = 6/167 (3%) Query: 6 RLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAG 65 RLF A + + Q+ + A + VAA + HLTL F+GEV + Sbjct: 3 RLFIAAWPDSVVCAQLAEYSAKCEWANHAKLVAATDFHLTLRFIGEVDLPMLNTIRESLA 62 Query: 66 RIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPH 125 + + L W V L L L + + + G R + PH Sbjct: 63 -LNFEPIDIELGRPQLWEE--VAVLRPISTSTKLTALHDSIEEKLGCLGLTADRRGYRPH 119 Query: 126 ITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRW 172 +TL A + P ++ + F L S + RY L+ + Sbjct: 120 VTLAHRAKH--SRLPQSSVIAWRINAFCLVESISSPAG-RYRILQTY 163 >UniRef50_Q2B4M3 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B4M3_9BACI Length = 185 Score = 119 bits (300), Expect = 3e-26, Method: Composition-based stats. Identities = 43/183 (23%), Positives = 74/183 (40%), Gaps = 16/183 (8%) Query: 6 RLFFAIDLPAEIREQII-HWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLA 64 FFA+ LP + +E++ A E + V + H+TLAFLG ++ + + L Sbjct: 4 HYFFAVRLPDDAKEKLKLKCEAAAGMLEFQKWVHYQDYHITLAFLGNAGKDQLQHAARLV 63 Query: 65 GRI--RQPGFTLTLDDAGQWLRS---RVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSN 119 + + F+L+ G + + R+ W PR L ++ + +G Sbjct: 64 RKALEEEEAFSLSTSRFGVFGKPDQPRIFWSDTAAQPR-LAEVRKKVFDACKEAGFQLET 122 Query: 120 RPFHPHITLLRDASEAVTIPP--------PGFNWSYAVTEFTLYASSFARGRTRYTPLKR 171 RPF PHITL R + + P S+ E LY + R +Y ++ Sbjct: 123 RPFKPHITLARKWAGSSPFEPDLLGNESVLTETISFPAAEVVLYQTHMDRS-PKYEAIEV 181 Query: 172 WAL 174 + L Sbjct: 182 YTL 184 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.313 0.164 0.511 Lambda K H 0.267 0.0499 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,275,474,664 Number of Sequences: 3077464 Number of extensions: 53172807 Number of successful extensions: 200922 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 688 Number of HSP's successfully gapped in prelim test: 692 Number of HSP's that attempted gapping in prelim test: 197080 Number of HSP's gapped (non-prelim): 1460 length of query: 176 length of database: 1,040,396,356 effective HSP length: 120 effective length of query: 56 effective length of database: 671,100,676 effective search space: 37581637856 effective search space used: 37581637856 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (20.6 bits) S2: 89 (38.6 bits)