19/01/2012 09:24:50 : INFO  : Run start: Thu Jan 19 09:24:50 GMT 2012
19/01/2012 09:24:51 : INFO  : Initialised job
19/01/2012 09:24:51 : INFO  : Renaming log file 'phyre2_20120119_092450.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/ed6b15946e573931/phyre_20120119_092450.log'
19/01/2012 09:24:51 : INFO  : Initialised job:
Sequence
>batch____
MENAKMNSLIAQYPLVKDLVALKETTWFNPGTTSLAEGLPYVGLTEQDVQDAHARLSRFA
PYLAKAFPETAATGGIIESELVAIPAMQKRLEKEYQQPISGQLLLKKDSHLPISGSIKAR
GGIYEVLAHAEKLALEAGLLTLDDDYSKLLSPEFKQFFSQYSIAVGSTGNLGLSIGIMSA
RIGFKVTVHMSADARAWKKAKLRSHGVTVVEYEQDYGVAVEEGRKAAQSDPNCFFIDDEN
SRTLFLGYSVAGQRLKAQFAQQGRIVDADNPLFVYLPCGVGGGPGGVAFGLKLAFGDHVH
CFFAEPTHSPCMLLGVHTGLHDQISVQDIGIDNLTAADGLAVGRASGFVGRAMERLLDGF
YTLSDQTMYDMLGWLAQEEGIRLEPSALAGMAGPQRVCASVSYQQMHGFSAEQLRNTTHL
VWATGGGMVPEEEMNQYLAKGR

19/01/2012 09:24:51 : INFO  : Checked sequence
19/01/2012 09:24:51 : INFO  : Finding homologues with PSI-BLAST
19/01/2012 09:24:51 : INFO  : PSI-BLAST 3 iterations
19/01/2012 09:27:03 : INFO  : PSI-BLAST 5 iterations
19/01/2012 09:29:37 : INFO  : Finished PSI-BLAST
19/01/2012 09:29:37 : INFO  : Running Buildali to generate a3m file
19/01/2012 09:38:21 : INFO  : Converting to HMM
19/01/2012 09:38:25 : INFO  : Calibrating HMM
19/01/2012 09:38:36 : INFO  : Searching HMM database
19/01/2012 09:46:48 : INFO  : Finished buildali
19/01/2012 09:46:48 : INFO  : Predicting secondary structure
19/01/2012 09:46:48 : INFO  : Predicted secondary structure (PSI-Pred)
19/01/2012 09:46:48 : INFO  : Predicting Disordered regions
19/01/2012 09:46:48 : INFO  : Predicted Disorder (Disopred)
19/01/2012 09:46:48 : INFO  : Running memsat_svm check
19/01/2012 09:50:27 : INFO  : Running memsat_svm full
19/01/2012 09:56:49 : INFO  : Predicted Transmembrane (memsat_svm) ID 'ed6b15946e573931'
19/01/2012 09:56:49 : INFO  : Initialising fold library search
19/01/2012 09:56:49 : INFO  : Initialised search input
19/01/2012 09:56:49 : INFO  : Building Ensemble models
19/01/2012 09:56:50 : INFO  : Building hh.c3r0zA_.model.1.pdb
19/01/2012 09:56:50 : INFO  : Building c3r0zA_.1.pdb
19/01/2012 09:56:50 : INFO  : Building c1tdjA_.2.pdb
19/01/2012 09:56:51 : INFO  : Building d1pwha_.3.pdb
19/01/2012 09:56:51 : INFO  : Building c3l6cA_.4.pdb
19/01/2012 09:56:52 : INFO  : Building c3iauA_.5.pdb
19/01/2012 09:56:52 : INFO  : Building c2gn0A_.6.pdb
19/01/2012 09:56:52 : INFO  : Building c1p5jA_.7.pdb
19/01/2012 09:56:53 : INFO  : Building d1p5ja_.8.pdb
19/01/2012 09:56:53 : INFO  : Building d1v71a1.9.pdb
19/01/2012 09:56:54 : INFO  : Building c2rkbE_.10.pdb
19/01/2012 09:56:54 : INFO  : Building d1ve5a1.11.pdb
19/01/2012 09:56:55 : INFO  : Building c2zsjB_.12.pdb
19/01/2012 09:56:55 : INFO  : Building c3pc3A_.13.pdb
19/01/2012 09:56:56 : INFO  : Building d1jbqa_.14.pdb
19/01/2012 09:56:56 : INFO  : Building c2d1fA_.15.pdb
19/01/2012 09:56:57 : INFO  : Building c1jbqD_.16.pdb
19/01/2012 09:56:57 : INFO  : Building d1tdja1.17.pdb
19/01/2012 09:56:58 : INFO  : Building d1v7ca_.18.pdb
19/01/2012 09:56:58 : INFO  : Building d1e5xa_.19.pdb
19/01/2012 09:56:58 : INFO  : Building d1z7wa1.20.pdb
19/01/2012 09:57:01 : INFO  : Finished HH model building
19/01/2012 09:57:01 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
19/01/2012 09:57:05 : INFO  : html domain output complete ID 'ed6b15946e573931'
19/01/2012 12:14:15 : INFO  : Run end  : Thu Jan 19 12:14:15 GMT 2012
