Phyre 2 alignment of P76243 with d1u5ta1

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Job Description | P76243
Confidence | 4.08% | Date | Thu Jan 5 12:21:10 GMT 2012
Rank | 70 | Aligned Residues | 25
% Identity | 12% | Template | d1u5ta1
SCOP info | DNA/RNA-binding 3-helical bundle | "Winged helix" DNA-binding domain | Vacuolar sorting protein domain
Resolution | 3.60

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | A | T | F | R | E | Q | Y | L | A | E | L | A | Q | H | E | Q | E | G | K | R | L | A | D | I | A
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template Sequence |  | V | E | F | A | K | K | H | N | S | E | L | Q | A | S | P | E | F | R | S | K | F | M | H | M | C
Template Known Secondary structure |  |  |  |  |  |  |  |  | T | T | T | T | T | T |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 44 | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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