Phyre 2 alignment of P76243 with c3iz6S_

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Job Description | P76243
Confidence | 7.12% | Date | Thu Jan 5 12:21:10 GMT 2012
Rank | 33 | Aligned Residues | 27
% Identity | 26% | Template | c3iz6S_
PDB info | PDB header:ribosome | Chain: S: PDB Molecule:40s ribosomal protein s19 (s19e); | PDBTitle: localization of the small subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
Resolution | 5.50 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 42 | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | K | E | I | T | P | S | T | E | . | . | . | . | . | . | . | . | . | . | L | R | K | A | F | H | G | E | V | V | D | Y | A | T | F | R | E | Q | Y
Query Conservation |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | K | E | L | P | P | Y | D | P | D | W | Y | Y | T | R | A | A | S | I | A | R | K | I | Y | L | R | Q | G | I | G | V | G | G | F | Q | K | I | Y
Template Known Secondary structure |  |  | S | S | S | T |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | B |  |  |  |  |  |  | S | S | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 46 | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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