Phyre 2 Results for P76243

Email | l.a.kelley@imperial.ac.uk
Description | P76243
Date | Thu Jan 5 12:21:10 GMT 2012
Unique Job ID | ed5bd02b743d537b

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | d1e8ca2 |
|  | 29.2 | 13 | Fold:MurD-like peptide ligases, peptide-binding domain Superfamily:MurD-like peptide ligases, peptide-binding domain Family:MurCDEF C-terminal domain
2 | d1bsma2 |
|  | 22.0 | 23 | Fold:Fe,Mn superoxide dismutase (SOD), C-terminal domain Superfamily:Fe,Mn superoxide dismutase (SOD), C-terminal domain Family:Fe,Mn superoxide dismutase (SOD), C-terminal domain
3 | d2gykb1 |
|  | 17.9 | 22 | Fold:His-Me finger endonucleases Superfamily:His-Me finger endonucleases Family:HNH-motif
4 | d1sh0a_ |
|  | 16.1 | 21 | Fold:DNA/RNA polymerases Superfamily:DNA/RNA polymerases Family:RNA-dependent RNA-polymerase
5 | c2b43D_ |
|  | 15.8 | 21 | PDB header:viral protein Chain: D: PDB Molecule:non-structural polyprotein; PDBTitle: crystal structure of the norwalk virus rna dependent rna polymerase2 from strain hu/nlv/dresden174/1997/ge
6 | d2nyba2 |
|  | 15.3 | 19 | Fold:Fe,Mn superoxide dismutase (SOD), C-terminal domain Superfamily:Fe,Mn superoxide dismutase (SOD), C-terminal domain Family:Fe,Mn superoxide dismutase (SOD), C-terminal domain
7 | d1y67a2 |
|  | 15.3 | 24 | Fold:Fe,Mn superoxide dismutase (SOD), C-terminal domain Superfamily:Fe,Mn superoxide dismutase (SOD), C-terminal domain Family:Fe,Mn superoxide dismutase (SOD), C-terminal domain
8 | d1idsa2 |
|  | 15.1 | 31 | Fold:Fe,Mn superoxide dismutase (SOD), C-terminal domain Superfamily:Fe,Mn superoxide dismutase (SOD), C-terminal domain Family:Fe,Mn superoxide dismutase (SOD), C-terminal domain
9 | c2c55A_ |
|  | 15.0 | 32 | PDB header:viral protein Chain: A: PDB Molecule:protein p6; PDBTitle: solution structure of the human immunodeficiency virus type2 1 p6 protein
10 | c3nahC_ |
|  | 14.7 | 25 | PDB header:transferase Chain: C: PDB Molecule:rna dependent rna polymerase; PDBTitle: crystal structures and functional analysis of murine norovirus rna-2 dependent rna polymerase
11 | d1jr9a2 |
|  | 12.8 | 20 | Fold:Fe,Mn superoxide dismutase (SOD), C-terminal domain Superfamily:Fe,Mn superoxide dismutase (SOD), C-terminal domain Family:Fe,Mn superoxide dismutase (SOD), C-terminal domain
12 | d1gv3a2 |
|  | 12.3 | 12 | Fold:Fe,Mn superoxide dismutase (SOD), C-terminal domain Superfamily:Fe,Mn superoxide dismutase (SOD), C-terminal domain Family:Fe,Mn superoxide dismutase (SOD), C-terminal domain
13 | d1ix9a2 |
|  | 12.2 | 15 | Fold:Fe,Mn superoxide dismutase (SOD), C-terminal domain Superfamily:Fe,Mn superoxide dismutase (SOD), C-terminal domain Family:Fe,Mn superoxide dismutase (SOD), C-terminal domain
14 | d1wb8a2 |
|  | 12.1 | 10 | Fold:Fe,Mn superoxide dismutase (SOD), C-terminal domain Superfamily:Fe,Mn superoxide dismutase (SOD), C-terminal domain Family:Fe,Mn superoxide dismutase (SOD), C-terminal domain
15 | c2zfuA_ |
|  | 11.6 | 10 | PDB header:nuclear protein Chain: A: PDB Molecule:cerebral protein 1; PDBTitle: structure of the methyltransferase-like domain of nucleomethylin
16 | d1p7ga2 |
|  | 10.5 | 12 | Fold:Fe,Mn superoxide dismutase (SOD), C-terminal domain Superfamily:Fe,Mn superoxide dismutase (SOD), C-terminal domain Family:Fe,Mn superoxide dismutase (SOD), C-terminal domain
17 | d1uera2 |
|  | 10.1 | 21 | Fold:Fe,Mn superoxide dismutase (SOD), C-terminal domain Superfamily:Fe,Mn superoxide dismutase (SOD), C-terminal domain Family:Fe,Mn superoxide dismutase (SOD), C-terminal domain
18 | d1coja2 |
|  | 9.7 | 19 | Fold:Fe,Mn superoxide dismutase (SOD), C-terminal domain Superfamily:Fe,Mn superoxide dismutase (SOD), C-terminal domain Family:Fe,Mn superoxide dismutase (SOD), C-terminal domain
19 | d1b06a2 |
|  | 9.7 | 10 | Fold:Fe,Mn superoxide dismutase (SOD), C-terminal domain Superfamily:Fe,Mn superoxide dismutase (SOD), C-terminal domain Family:Fe,Mn superoxide dismutase (SOD), C-terminal domain
20 | d2jnga1 |
|  | 9.5 | 13 | Fold:SH3-like barrel Superfamily:Tudor/PWWP/MBT Family:CPH domain
21 | c2xznT_ |
| not modelled | 9.5 | 19 | PDB header:ribosome Chain: T: PDB Molecule:rps19e; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2
22 | c2jufA_ |
| not modelled | 9.3 | 13 | PDB header:gene regulation Chain: A: PDB Molecule:p53-associated parkin-like cytoplasmic protein; PDBTitle: nmr solution structure of parc cph domain. nesg target2 hr3443b/sgc-toronto
23 | c2k4nA_ |
| not modelled | 9.2 | 35 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:protein pf0246; PDBTitle: nmr structure of protein pf0246 from pyrococcus furiosus:2 target pfr75 from the northeast structural genomics3 consortium
24 | d1unfx2 |
| not modelled | 8.7 | 24 | Fold:Fe,Mn superoxide dismutase (SOD), C-terminal domain Superfamily:Fe,Mn superoxide dismutase (SOD), C-terminal domain Family:Fe,Mn superoxide dismutase (SOD), C-terminal domain
25 | d2jb0b1 |
| not modelled | 8.5 | 19 | Fold:His-Me finger endonucleases Superfamily:His-Me finger endonucleases Family:HNH-motif
26 | c7ceiB_ |
| not modelled | 8.5 | 19 | PDB header:immune system Chain: B: PDB Molecule:protein (colicin e7 immunity protein); PDBTitle: the endonuclease domain of colicin e7 in complex with its inhibitor2 im7 protein
27 | d2p4ka2 |
| not modelled | 8.4 | 23 | Fold:Fe,Mn superoxide dismutase (SOD), C-terminal domain Superfamily:Fe,Mn superoxide dismutase (SOD), C-terminal domain Family:Fe,Mn superoxide dismutase (SOD), C-terminal domain
28 | d1my6a2 |
| not modelled | 8.1 | 16 | Fold:Fe,Mn superoxide dismutase (SOD), C-terminal domain Superfamily:Fe,Mn superoxide dismutase (SOD), C-terminal domain Family:Fe,Mn superoxide dismutase (SOD), C-terminal domain
29 | c3h4rA_ |
| not modelled | 7.5 | 47 | PDB header:hydrolase Chain: A: PDB Molecule:exodeoxyribonuclease 8; PDBTitle: crystal structure of e. coli rece exonuclease
30 | d3sdpa2 |
| not modelled | 7.5 | 19 | Fold:Fe,Mn superoxide dismutase (SOD), C-terminal domain Superfamily:Fe,Mn superoxide dismutase (SOD), C-terminal domain Family:Fe,Mn superoxide dismutase (SOD), C-terminal domain
31 | c3bl9B_ |
| not modelled | 7.4 | 31 | PDB header:hydrolase Chain: B: PDB Molecule:scavenger mrna-decapping enzyme dcps; PDBTitle: synthetic gene encoded dcps bound to inhibitor dg157493
32 | d1mnga2 |
| not modelled | 7.1 | 23 | Fold:Fe,Mn superoxide dismutase (SOD), C-terminal domain Superfamily:Fe,Mn superoxide dismutase (SOD), C-terminal domain Family:Fe,Mn superoxide dismutase (SOD), C-terminal domain
33 | c3iz6S_ |
| not modelled | 7.1 | 26 | PDB header:ribosome Chain: S: PDB Molecule:40s ribosomal protein s19 (s19e); PDBTitle: localization of the small subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
34 | c3iz5N_ |
| not modelled | 7.1 | 43 | PDB header:ribosome Chain: N: PDB Molecule:60s ribosomal protein l14 (l14e); PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
35 | c1xmlA_ |
| not modelled | 7.0 | 31 | PDB header:chaperone Chain: A: PDB Molecule:heat shock-like protein 1; PDBTitle: structure of human dcps
36 | d1ohua_ |
| not modelled | 6.9 | 9 | Fold:Toxins' membrane translocation domains Superfamily:Bcl-2 inhibitors of programmed cell death Family:Bcl-2 inhibitors of programmed cell death
37 | c2jofA_ |
| not modelled | 6.4 | 38 | PDB header:de novo protein Chain: A: PDB Molecule:trp-cage; PDBTitle: the trp-cage: optimizing the stability of a globular2 miniprotein
38 | d1u09a_ |
| not modelled | 6.3 | 21 | Fold:DNA/RNA polymerases Superfamily:DNA/RNA polymerases Family:RNA-dependent RNA-polymerase
39 | c2kzuA_ |
| not modelled | 6.2 | 22 | PDB header:apoptosis Chain: A: PDB Molecule:death-associated protein 6; PDBTitle: daxx helical bundle (dhb) domain / rassf1c complex
40 | c1b06A_ |
| not modelled | 6.1 | 12 | PDB header:oxidoreductase Chain: A: PDB Molecule:protein (superoxide dismutase); PDBTitle: superoxide dismutase from sulfolobus acidocaldarius
41 | c1y6uA_ |
| not modelled | 5.8 | 33 | PDB header:dna binding protein Chain: A: PDB Molecule:excisionase from transposon tn916; PDBTitle: the structure of the excisionase (xis) protein from2 conjugative transposon tn916 provides insights into the3 regulation of heterobivalent tyrosine recombinases
42 | d1iufa1 |
| not modelled | 5.6 | 18 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Centromere-binding
43 | c2nybC_ |
| not modelled | 5.6 | 19 | PDB header:oxidoreductase Chain: C: PDB Molecule:superoxide dismutase [fe]; PDBTitle: crystal structure of e.coli iron superoxide dismutase q69e2 at 1.1 angstrom resolution
44 | d1dt0a2 |
| not modelled | 5.6 | 17 | Fold:Fe,Mn superoxide dismutase (SOD), C-terminal domain Superfamily:Fe,Mn superoxide dismutase (SOD), C-terminal domain Family:Fe,Mn superoxide dismutase (SOD), C-terminal domain
45 | c1avmA_ |
| not modelled | 5.5 | 23 | PDB header:oxidoreductase Chain: A: PDB Molecule:superoxide dismutase; PDBTitle: the cambialistic superoxide dismutase (fe-sod) of p. shermanii2 coordinated by azide
46 | c2cw2B_ |
| not modelled | 5.3 | 16 | PDB header:oxidoreductase Chain: B: PDB Molecule:superoxide dismutase 1; PDBTitle: crystal structure of superoxide dismutase from p. marinus
47 | c3tqjB_ |
| not modelled | 5.3 | 24 | PDB header:oxidoreductase Chain: B: PDB Molecule:superoxide dismutase [fe]; PDBTitle: structure of the superoxide dismutase (fe) (sodb) from coxiella2 burnetii
48 | d1vlra1 |
| not modelled | 5.2 | 31 | Fold:HIT-like Superfamily:HIT-like Family:mRNA decapping enzyme DcpS C-terminal domain
49 | c1my6A_ |
| not modelled | 5.2 | 15 | PDB header:oxidoreductase Chain: A: PDB Molecule:iron (iii) superoxide dismutase; PDBTitle: the 1.6 a structure of fe-superoxide dismutase from the2 thermophilic cyanobacterium thermosynechococcus elongatus3 : correlation of epr and structural characteristics
50 | c2gpcB_ |
| not modelled | 5.2 | 15 | PDB header:oxidoreductase Chain: B: PDB Molecule:iron superoxide dismutase; PDBTitle: the crystal structure of the enzyme fe-superoxide dismutase2 from trypanosoma cruzi
51 | c2a03A_ |
| not modelled | 5.2 | 16 | PDB header:oxidoreductase Chain: A: PDB Molecule:fe-superoxide dismutase homolog; PDBTitle: superoxide dismutase protein from plasmodium berghei
52 | c1ma1E_ |
| not modelled | 5.1 | 19 | PDB header:oxidoreductase Chain: E: PDB Molecule:superoxide dismutase; PDBTitle: structure and properties of the atypical iron superoxide2 dismutase from methanobacterium thermoautotrophicum