211 c3rfaA_ Probab=50.19   E-value=12  Score=14.61  Aligned_columns=112  Identities=15%

Q ss_pred             HHHHHHHHCCCEEEEEEEECCCCCCCCCHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCEEE----EECC--CCH
Q ss_conf             9999999779819999984267311221013025988999999824898576889999998798699----9879--998
Q batch____       500 RVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGITVK----ILTG--DSE  573 (898)
Q Consensus       500 ~~~~~~a~~Glrvl~~a~k~~~~~~~~~~~~~e~~l~~lG~i~~~D~lr~~~~~~I~~l~~aGI~v~----miTG--D~~  573 (898)
                      +.+.+++..+...++++-...+++.........+...+       +.+.+.+.+.++...+.|++++    |+-|  |+.
T Consensus       201 ~~i~~L~~~~~~~l~isl~a~~~e~r~~l~p~~k~~~l-------~~i~~~~~~~~~~~~~~g~~v~i~y~li~g~nDs~  273 (333)
T c3rfaA_         201 PALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNI-------ETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGT  273 (333)
T ss_dssp             HHHHHHHHHCCCEEEEECCCSSHHHHHHHSGGGGTSCH-------HHHHHHHHHHHHHCTTTTTCEEEEEEEBTTTTCSH
T ss_pred             HHHHHHHHHCCCEEEECCCCCCHHHHHHHEECCCCCCH-------HHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCH
T ss_conf             78999873158489980677987786231406788899-------99999999999977643980899855408999898


Q ss_pred             HHHHHHHHHCC-------CCHHHCCCHHHHHHCCHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCEE
Q ss_conf             99999998719-------9963424706687299899985300280895079378999999998589869
Q batch____       574 LVAAKVCHEVG-------LDAGEVVIGSDIETLSDDELANLAQRTTLFARLTPMHKERIVTLLKREGHVV  636 (898)
Q Consensus       574 ~TA~~iA~~~G-------i~~~~v~~g~~l~~l~~~~~~~~~~~~~Vfar~~P~~K~~iV~~lq~~g~~V  636 (898)
                      +.|..+++-+.       +.+.+-..|..                  |.+.+++...++.+.|++.|-.|
T Consensus       274 e~a~~l~~~l~~~~~~Vnlip~nP~~g~~------------------~~~p~~e~i~~f~~~L~~~Gi~v  325 (333)
T c3rfaA_         274 EHAHQLAELLKDTPCKINLIPWNPFPGAP------------------YGRSSNSRIDRFSKVLMSYGFTT  325 (333)
T ss_dssp             HHHHHHHHHTTTSCEEEEEEECCCCTTCC------------------CCBCCHHHHHHHHHHHHHTTCEE
T ss_pred             HHHHHHHHHHHCCCCEEEEEECCCCCCCC------------------CCCCCHHHHHHHHHHHHHCCCEE
T ss_conf             99999999985089879999624688888------------------77889899999999999789869