BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (156 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P09184 Very short patch repair protein n=115 Tax=Entero... 322 3e-87 UniRef50_Q5QV95 DNA mismatch endonuclease, patch repair protein ... 147 1e-34 UniRef50_B0KIU4 DNA mismatch endonuclease Vsr n=1 Tax=Pseudomona... 141 6e-33 UniRef50_A1BCM5 T/G mismatch-specific endonuclease n=12 Tax=Bact... 138 7e-32 UniRef50_Q0AK56 T/G mismatch-specific endonuclease n=8 Tax=Prote... 137 1e-31 UniRef50_D0C733 T/G mismatch-specific endonuclease n=1 Tax=Acine... 136 2e-31 UniRef50_A9GYW9 DNA mismatch endonuclease vsr n=1 Tax=Roseobacte... 135 5e-31 UniRef50_B8F0E1 DNA mismatch endonuclease Vsr n=1 Tax=Thauera sp... 133 1e-30 UniRef50_C7PIW0 DNA mismatch endonuclease Vsr n=8 Tax=Bacteroide... 132 3e-30 UniRef50_Q1PVJ9 Strongly similar to very short patch repair endo... 128 6e-29 UniRef50_A0LQ21 T/G mismatch-specific endonuclease n=3 Tax=Prote... 127 1e-28 UniRef50_A1S287 T/G mismatch-specific endonuclease n=1 Tax=Shewa... 124 1e-27 UniRef50_Q5X687 Putative uncharacterized protein n=1 Tax=Legione... 122 3e-27 UniRef50_D1T035 DNA mismatch endonuclease Vsr n=1 Tax=Acidovorax... 122 4e-27 UniRef50_Q5NYW8 Very short patch repair protein (DNA mismatch en... 122 4e-27 UniRef50_C9L355 XorII very short patch repair endonuclease n=2 T... 120 1e-26 UniRef50_A1B3R0 T/G mismatch-specific endonuclease n=2 Tax=Rhodo... 119 2e-26 UniRef50_A5V0Q2 T/G mismatch-specific endonuclease n=3 Tax=Bacte... 119 3e-26 UniRef50_A1U1D0 T/G mismatch-specific endonuclease n=2 Tax=Prote... 119 3e-26 UniRef50_B3QE76 DNA mismatch endonuclease Vsr n=1 Tax=Rhodopseud... 119 4e-26 UniRef50_Q21TW8 T/G mismatch-specific endonuclease n=5 Tax=Prote... 119 4e-26 UniRef50_B3EJE0 DNA mismatch endonuclease Vsr n=2 Tax=Bacteria R... 117 8e-26 UniRef50_Q1IIN5 T/G mismatch-specific endonuclease n=1 Tax=Candi... 117 1e-25 UniRef50_A3WFL9 DNA mismatch endonuclease Vsr, putative n=1 Tax=... 117 1e-25 UniRef50_B9E7L5 Putative uncharacterized protein n=1 Tax=Macroco... 117 1e-25 UniRef50_A9H9K5 DNA mismatch endonuclease Vsr n=4 Tax=Proteobact... 116 2e-25 UniRef50_Q3IVR8 T/G mismatch-specific endonuclease n=4 Tax=Bacte... 115 4e-25 UniRef50_B4RGD5 Patch repair protein n=4 Tax=Bacteria RepID=B4RG... 115 5e-25 UniRef50_UPI000196BAC4 hypothetical protein CATMIT_00200 n=1 Tax... 114 7e-25 UniRef50_A4G657 Very short patch repair protein (DNA mismatch en... 114 9e-25 UniRef50_A1A2S3 Possible XorII very-short-patch-repair endonucle... 112 3e-24 UniRef50_Q9JWD6 Putative very short patch repair endonuclease n=... 112 3e-24 UniRef50_B1J232 DNA mismatch endonuclease Vsr n=7 Tax=Bacteria R... 112 3e-24 UniRef50_Q2S7T9 DNA G:T-mismatch repair endonuclease n=6 Tax=Pro... 112 4e-24 UniRef50_Q31CG2 T/G mismatch-specific endonuclease n=5 Tax=Bacte... 112 5e-24 UniRef50_Q5ZW52 Patch repair protein n=2 Tax=Legionella RepID=Q5... 111 8e-24 UniRef50_D2LK67 DNA mismatch endonuclease Vsr n=1 Tax=Rhodomicro... 110 1e-23 UniRef50_D1QVC0 Patch repair protein n=1 Tax=Prevotella oris F03... 110 2e-23 UniRef50_D1BA88 DNA mismatch endonuclease Vsr n=6 Tax=Bacteria R... 108 4e-23 UniRef50_C7LPG4 DNA mismatch endonuclease Vsr n=1 Tax=Desulfomic... 106 2e-22 UniRef50_Q28ND8 T/G mismatch-specific endonuclease n=1 Tax=Janna... 106 3e-22 UniRef50_B7GPI0 DNA mismatch endonuclease vsr n=12 Tax=cellular ... 105 3e-22 UniRef50_A3N1K2 Putative DNA mismatch endonuclease n=2 Tax=Actin... 105 5e-22 UniRef50_A2SSP3 T/G mismatch-specific endonuclease n=1 Tax=Metha... 105 6e-22 UniRef50_A3PQ65 T/G mismatch-specific endonuclease n=1 Tax=Rhodo... 105 6e-22 UniRef50_Q027Y0 T/G mismatch-specific endonuclease n=2 Tax=Acido... 104 8e-22 UniRef50_C7RCX3 DNA mismatch endonuclease Vsr n=1 Tax=Kangiella ... 103 2e-21 UniRef50_UPI00016AF703 DNA mismatch endonuclease vsr n=2 Tax=pse... 103 2e-21 UniRef50_C5B599 DNA mismatch endonuclease vsr n=2 Tax=Methylobac... 103 2e-21 UniRef50_C5APE9 Very-short-patch-repair endonuclease n=1 Tax=Met... 101 8e-21 UniRef50_A3ZZ75 Patch repair protein n=1 Tax=Blastopirellula mar... 100 1e-20 UniRef50_C9RP57 DNA mismatch endonuclease Vsr n=1 Tax=Fibrobacte... 100 1e-20 UniRef50_Q56829 XorII very short patch repair endonuclease n=16 ... 100 2e-20 UniRef50_A5EB61 T/G mismatch-specific endonuclease n=2 Tax=Brady... 99 5e-20 UniRef50_Q64Q05 Putative very-short-patch-repair endonuclease n=... 98 8e-20 UniRef50_A0LM24 T/G mismatch-specific endonuclease n=1 Tax=Syntr... 98 9e-20 UniRef50_C9PU27 Putative uncharacterized protein n=1 Tax=Prevote... 98 9e-20 UniRef50_B5JQD1 DNA mismatch endonuclease Vsr family n=1 Tax=Ver... 97 2e-19 UniRef50_C9MXV4 Patch repair protein n=2 Tax=Leptotrichia hofsta... 95 9e-19 UniRef50_C6BBA5 DNA mismatch endonuclease Vsr n=1 Tax=Ralstonia ... 94 1e-18 UniRef50_A6E296 Very short patch repair protein (DNA mismatch en... 91 2e-17 UniRef50_B3Q989 DNA mismatch endonuclease Vsr n=4 Tax=Rhodopseud... 90 2e-17 UniRef50_Q2IF54 T/G mismatch-specific endonuclease n=1 Tax=Anaer... 89 4e-17 UniRef50_Q1D6D6 Very short patch repair protein n=1 Tax=Myxococc... 89 6e-17 UniRef50_C4FAH6 Putative uncharacterized protein n=1 Tax=Collins... 87 1e-16 UniRef50_C7N4R6 T/G mismatch-specific endonuclease n=3 Tax=Corio... 87 1e-16 UniRef50_C4RRL0 XorII-short-patch-repair endonuclease n=1 Tax=Mi... 87 2e-16 UniRef50_B8HDH1 DNA mismatch endonuclease Vsr n=4 Tax=Bacteria R... 86 5e-16 UniRef50_C0EI85 Putative uncharacterized protein n=2 Tax=Clostri... 85 6e-16 UniRef50_A9ADY1 DNA mismatch endonuclease Vsr n=2 Tax=Burkholder... 83 3e-15 UniRef50_D2BGG7 Vsr domain protein T:G mismatch repair endonucle... 82 8e-15 UniRef50_B8G3L1 DNA mismatch endonuclease Vsr n=1 Tax=Chloroflex... 80 2e-14 UniRef50_C9S232 DNA mismatch endonuclease Vsr n=2 Tax=Geobacillu... 80 2e-14 UniRef50_Q8EL90 Very-short-patch-repair endonuclease n=3 Tax=Bac... 80 2e-14 UniRef50_Q12VT6 DNA mismatch (G:T) repair endonuclease n=1 Tax=M... 80 2e-14 UniRef50_A4L312 V.TspMI n=2 Tax=Thermus RepID=A4L312_9DEIN 80 3e-14 UniRef50_C4ZAA5 Very short patch repair endonuclease, putative n... 80 3e-14 UniRef50_C6D8V0 DNA mismatch endonuclease Vsr n=1 Tax=Paenibacil... 80 3e-14 UniRef50_C8WJH8 DNA mismatch endonuclease Vsr n=2 Tax=Coriobacte... 79 3e-14 UniRef50_A4E909 Putative uncharacterized protein n=1 Tax=Collins... 79 5e-14 UniRef50_Q20YF6 DNA mismatch endonuclease vsr n=1 Tax=Rhodopseud... 78 7e-14 UniRef50_C7DGF8 DNA mismatch endonuclease Vsr n=1 Tax=Candidatus... 78 9e-14 UniRef50_D0L6H5 DNA mismatch endonuclease Vsr n=1 Tax=Gordonia b... 78 1e-13 UniRef50_A3U5P6 DNA mismatch endonuclease Vsr, putative n=1 Tax=... 77 2e-13 UniRef50_A4SC96 DNA mismatch endonuclease n=1 Tax=Chlorobium pha... 76 3e-13 UniRef50_B0TCI0 DNA mismatch endonuclease vsr, putative n=5 Tax=... 76 4e-13 UniRef50_UPI0001B4F16E very short patch repair protein n=1 Tax=S... 75 6e-13 UniRef50_C9N7G6 DNA mismatch endonuclease Vsr n=5 Tax=Actinomyce... 75 8e-13 UniRef50_C8VVT5 DNA mismatch endonuclease Vsr n=1 Tax=Desulfotom... 74 1e-12 UniRef50_D1WVX3 DNA mismatch endonuclease Vsr n=1 Tax=Streptomyc... 73 3e-12 UniRef50_UPI00016A6F51 putative very short patch repair protein ... 72 5e-12 UniRef50_UPI0001968FCC hypothetical protein BACCELL_03936 n=1 Ta... 72 5e-12 UniRef50_C0ABV7 DNA G:T-mismatch repair endonuclease n=2 Tax=Ver... 70 1e-11 UniRef50_A1SJ03 T/G mismatch-specific endonuclease n=1 Tax=Nocar... 70 2e-11 UniRef50_A0RY33 DNA G/T mismatch repair endonuclease n=1 Tax=Cen... 69 3e-11 UniRef50_UPI0001B50D9E putative DNA mismatch endonuclease n=1 Ta... 69 4e-11 UniRef50_D0LEE5 DNA mismatch endonuclease Vsr n=2 Tax=Actinomyce... 69 5e-11 UniRef50_Q04A40 T/G mismatch-specific endonuclease n=3 Tax=Bacte... 69 6e-11 UniRef50_A1UB42 DNA mismatch endonuclease vsr n=4 Tax=Actinomyce... 68 8e-11 UniRef50_UPI0001BCE75A DNA mismatch endonuclease Vsr n=1 Tax=Sel... 68 1e-10 UniRef50_A4X2E7 DNA mismatch endonuclease vsr n=2 Tax=Actinomyce... 68 1e-10 UniRef50_D1A867 DNA mismatch endonuclease Vsr n=1 Tax=Thermomono... 67 2e-10 UniRef50_A4ANX8 Putative very-short-patch-repair endonuclease n=... 67 2e-10 UniRef50_C7V3C2 Putative uncharacterized protein n=1 Tax=Enteroc... 66 4e-10 UniRef50_C7XVZ3 Short-patch-repair endonuclease n=1 Tax=Lactobac... 66 4e-10 UniRef50_A1K2B8 Putative hypothetical very short patch repair en... 66 4e-10 UniRef50_A6BKR1 Putative uncharacterized protein n=1 Tax=Dorea l... 65 6e-10 UniRef50_A5CSG2 Putative patch repair endonuclease n=1 Tax=Clavi... 65 6e-10 UniRef50_D1PRX0 Short patch repair protein n=1 Tax=Subdoligranul... 64 1e-09 UniRef50_A1T424 DNA mismatch endonuclease vsr n=12 Tax=Actinomyc... 64 1e-09 UniRef50_P50186 NaeI very short patch repair endonuclease n=2 Ta... 63 3e-09 UniRef50_Q2SAF1 DNA G:T-mismatch repair endonuclease n=1 Tax=Hah... 62 4e-09 UniRef50_D1S9Q4 DNA mismatch endonuclease Vsr n=1 Tax=Micromonos... 62 7e-09 UniRef50_D0LCF9 DNA mismatch endonuclease Vsr n=1 Tax=Gordonia b... 61 9e-09 UniRef50_P36434 HpaII very short patch repair endonuclease n=1 T... 60 2e-08 UniRef50_A3TJK1 Putative DNA mismatch endonuclease n=1 Tax=Janib... 59 6e-08 UniRef50_D2EGA7 DNA mismatch endonuclease Vsr n=1 Tax=Candidatus... 59 7e-08 UniRef50_B5HK48 Putative uncharacterized protein n=3 Tax=Strepto... 58 1e-07 UniRef50_A1W7Y7 Putative very short patch repair protein n=3 Tax... 55 6e-07 UniRef50_D1SGS2 DNA mismatch endonuclease Vsr n=2 Tax=Actinomyce... 54 2e-06 UniRef50_A6WGD4 DNA mismatch endonuclease vsr n=3 Tax=Actinomyce... 52 8e-06 UniRef50_D2SC98 DNA mismatch endonuclease vsr n=1 Tax=Geodermato... 39 0.035 >UniRef50_P09184 Very short patch repair protein n=115 Tax=Enterobacteriaceae RepID=VSR_ECOLI Length = 156 Score = 322 bits (825), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 156/156 (100%), Positives = 156/156 (100%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV Sbjct: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR Sbjct: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 Query: 121 GREKLTDEALTERLEEWICGEGASAQIDTQGIHLLA 156 GREKLTDEALTERLEEWICGEGASAQIDTQGIHLLA Sbjct: 121 GREKLTDEALTERLEEWICGEGASAQIDTQGIHLLA 156 >UniRef50_Q5QV95 DNA mismatch endonuclease, patch repair protein n=1 Tax=Idiomarina loihiensis RepID=Q5QV95_IDILO Length = 171 Score = 147 bits (370), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 67/152 (44%), Positives = 95/152 (62%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 MADVH+ R KNMRAI +RDT+IE ++ +L G +R+ +LPG+PD + +YR V Sbjct: 1 MADVHNTEQRRKNMRAIKSRDTSIEIQVRRILWHAGYRYRLNVKALPGKPDIYLPKYRAV 60 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 I +GC WH H+C F +P TRTEFW KI NV RD + ++ L + G R+L++WECAL+ Sbjct: 61 IQINGCLWHGHNCPQFVLPKTRTEFWRNKIKDNVRRDLKSVAALHDKGLRLLVIWECALQ 120 Query: 121 GREKLTDEALTERLEEWICGEGASAQIDTQGI 152 G+ +L + L W+ A ID QG+ Sbjct: 121 GKARLDNRYTYNLLNRWLSSTELLANIDKQGL 152 >UniRef50_B0KIU4 DNA mismatch endonuclease Vsr n=1 Tax=Pseudomonas putida GB-1 RepID=B0KIU4_PSEPG Length = 158 Score = 141 bits (356), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 67/132 (50%), Positives = 81/132 (61%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M DVH RS+NMRAI +DT E + L +G +R+ A LPG PD V+ +YR Sbjct: 1 MVDVHTPEARSRNMRAIRNKDTKPELLIRKALHARGFRYRLGGAGLPGHPDIVLPKYRTA 60 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 IF HGCFWH H+C FK+PATRTEFW KI N ERD+R S L E GW VL VWEC+L+ Sbjct: 61 IFIHGCFWHGHNCKYFKLPATRTEFWAGKIRSNQERDQRSTSLLVEQGWSVLTVWECSLK 120 Query: 121 GREKLTDEALTE 132 + L E Sbjct: 121 PSGPGVEAVLHE 132 >UniRef50_A1BCM5 T/G mismatch-specific endonuclease n=12 Tax=Bacteria RepID=A1BCM5_CHLPD Length = 176 Score = 138 bits (347), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 68/150 (45%), Positives = 87/150 (58%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 MADV TRS+ M I + +T E R+ L +G FR+ LPG+PD V +YR V Sbjct: 1 MADVVSPETRSRMMSGIRSENTVPEMRVRRGLHARGFRFRLHCGGLPGKPDIVFPKYRAV 60 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 IF HGCFWH H C LFK P TR +FW +KIGKN RD + L GWRVLIVWECAL+ Sbjct: 61 IFIHGCFWHAHECPLFKWPKTREDFWKKKIGKNRIRDLAVMDELARQGWRVLIVWECALK 120 Query: 121 GREKLTDEALTERLEEWICGEGASAQIDTQ 150 G+ + + + + EW+ +I Q Sbjct: 121 GKGRRPIDEVVDSCAEWLLSSSTKREIRGQ 150 >UniRef50_Q0AK56 T/G mismatch-specific endonuclease n=8 Tax=Proteobacteria RepID=Q0AK56_MARMM Length = 168 Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 66/138 (47%), Positives = 83/138 (60%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M DV D ATRS+ M I ++T E + L G+ +R+ D LPG+PD V+ +YR V Sbjct: 1 MPDVVDSATRSRMMAGIKAKNTKPEMLVRRGLHAMGIRYRLHDKRLPGKPDLVLPKYRSV 60 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 IF HGCFWH H C FK P TR +FW EKI N +RD + IS L GWRV +VWECALR Sbjct: 61 IFVHGCFWHGHDCPAFKWPKTREKFWREKISTNRKRDEKQISDLVRSGWRVSVVWECALR 120 Query: 121 GREKLTDEALTERLEEWI 138 + E + + L WI Sbjct: 121 SKTPDKVETILKLLASWI 138 >UniRef50_D0C733 T/G mismatch-specific endonuclease n=1 Tax=Acinetobacter baumannii ATCC 19606 RepID=D0C733_ACIBA Length = 174 Score = 136 bits (342), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 68/154 (44%), Positives = 90/154 (58%), Gaps = 2/154 (1%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M D+ D ATRS+ M I R+T E + SLL QG FR+ LPG+PD V+ +Y+ + Sbjct: 1 MVDIVDSATRSRMMSNIKGRNTKPELLIRSLLHAQGFRFRIHRKDLPGKPDIVLPKYKAI 60 Query: 61 IFTHGCFWH-HHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 IF HGCFWH H +C LFK+P +RTEFW KI KN + D + L GWR+ +WECA+ Sbjct: 61 IFIHGCFWHGHQNCRLFKLPGSRTEFWEAKISKNQDNDLKTKELLLNSGWRICTIWECAV 120 Query: 120 RGREKLTDEALTERLEEWICGEGASAQIDTQGIH 153 R R K AL L +W+ +ID I+ Sbjct: 121 R-RSKKDPVALMNILTKWLSCSEQLLEIDEPMIN 153 >UniRef50_A9GYW9 DNA mismatch endonuclease vsr n=1 Tax=Roseobacter litoralis Och 149 RepID=A9GYW9_9RHOB Length = 146 Score = 135 bits (340), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 64/138 (46%), Positives = 88/138 (63%) Query: 14 MRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHHC 73 M AI +T E + L +G +R+ D+ L GRPD V+ YR V+F +GCFWH H C Sbjct: 1 MAAIRGINTKPELLIRHGLHARGFRYRLHDSKLAGRPDLVLPRYRAVVFVNGCFWHGHDC 60 Query: 74 YLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTER 133 LFK P TR EFW KIG NVERD+R+++ L+ GWRV IVWEC L+G+++L + Sbjct: 61 PLFKWPKTREEFWRGKIGGNVERDQRNLAALKAAGWRVGIVWECVLKGKQRLQPTKVLGL 120 Query: 134 LEEWICGEGASAQIDTQG 151 L EWI G+ ++ I+ +G Sbjct: 121 LSEWIEGDTSACSIEGRG 138 >UniRef50_B8F0E1 DNA mismatch endonuclease Vsr n=1 Tax=Thauera sp. MZ1T RepID=B8F0E1_THASP Length = 137 Score = 133 bits (335), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 58/125 (46%), Positives = 79/125 (63%) Query: 14 MRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHHC 73 M I +++T IE L L QG +R+ DA LPG+PD V+ YR V+F HGCFWH H C Sbjct: 2 MAGIRSKNTRIEVSLRKALFAQGFRYRINDARLPGKPDIVLPRYRAVVFVHGCFWHGHDC 61 Query: 74 YLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTER 133 LF++PA+ T+FW KI N RD R L GWRV ++WECA+RG+++ A+ E Sbjct: 62 SLFRLPASNTDFWRTKIDTNRARDERACGELAAQGWRVAVIWECAIRGKKEAGVMAVAES 121 Query: 134 LEEWI 138 L+ W+ Sbjct: 122 LQAWL 126 >UniRef50_C7PIW0 DNA mismatch endonuclease Vsr n=8 Tax=Bacteroidetes RepID=C7PIW0_CHIPD Length = 140 Score = 132 bits (333), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 60/125 (48%), Positives = 79/125 (63%), Gaps = 1/125 (0%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M DVH K TRS NM I ++T E + L QG +R+ + LPG PD V+ +Y+ V Sbjct: 1 MVDVHSKETRSYNMSQIKGKNTKPEILVRKFLFAQGYRYRLHNKKLPGTPDLVLPKYKTV 60 Query: 61 IFTHGCFWHHHH-CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 IF HGCFWH H C F +P TRTE+WL KI NV +D I+ L+ +GWR+LI+WEC L Sbjct: 61 IFIHGCFWHRHEGCRYFVIPKTRTEWWLNKINGNVRKDIESINLLKSMGWRILILWECDL 120 Query: 120 RGREK 124 + +K Sbjct: 121 KPDKK 125 >UniRef50_Q1PVJ9 Strongly similar to very short patch repair endonuclease n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PVJ9_9BACT Length = 138 Score = 128 bits (321), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 61/138 (44%), Positives = 85/138 (61%), Gaps = 2/138 (1%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M DVHDK TRS NM I +DT E + L G G +++ D LPG+PD V +Y+ V Sbjct: 1 MTDVHDKKTRSYNMSKIRGKDTKPEIIVRKFLFGNGFRYKLHDKMLPGKPDLVFPKYKTV 60 Query: 61 IFTHGCFWH-HHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 +F HGCFWH H C F +P TR ++WLEKI +N + D + +L++LGW++L V+EC L Sbjct: 61 VFIHGCFWHGHDGCKYFVIPKTRRKWWLEKINRNKQLDTENSGKLKKLGWKILTVFECKL 120 Query: 120 R-GREKLTDEALTERLEE 136 + G + T L RL + Sbjct: 121 KHGNMENTLNRLATRLTK 138 >UniRef50_A0LQ21 T/G mismatch-specific endonuclease n=3 Tax=Proteobacteria RepID=A0LQ21_SYNFM Length = 165 Score = 127 bits (318), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 58/138 (42%), Positives = 79/138 (57%), Gaps = 1/138 (0%) Query: 3 DVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIF 62 D DK TRS+ M + +DT E +L L GL +R+ D LPG PD V ++ +F Sbjct: 2 DTVDKTTRSRIMSRVGQKDTGPEMKLRRSLHKIGLRYRLHDKRLPGSPDIVFPRFKAALF 61 Query: 63 THGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGR 122 HGCFWH H C P T +FW +K +N+ RDRR I LQ+ GWRV +VWEC+L+G+ Sbjct: 62 VHGCFWHRHGCKATTTPGTNVDFWRKKFDENIARDRRHIEALQDAGWRVAVVWECSLKGK 121 Query: 123 EKLTDEALTERLEEWICG 140 DE + + EW+ Sbjct: 122 RADPDE-VARLVSEWLVS 138 >UniRef50_A1S287 T/G mismatch-specific endonuclease n=1 Tax=Shewanella amazonensis SB2B RepID=A1S287_SHEAM Length = 161 Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 58/138 (42%), Positives = 84/138 (60%), Gaps = 6/138 (4%) Query: 7 KATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGC 66 K RS NM I DT E L + G +R+ D LPG+PD V +YR VIF +GC Sbjct: 2 KDKRSYNMSRIRGEDTRPEMWLRKRIHALGFRYRLHDKRLPGKPDLVFPKYRAVIFVNGC 61 Query: 67 FWHHHHCYLFKVPATRT------EFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 FWH HHC F+ PA+ + ++W EK+ N +RD +I + +EL WRVL++WECAL+ Sbjct: 62 FWHMHHCRFFQFPASSSTKGRGPQWWREKLIGNRQRDLENIEKCRELRWRVLVLWECALK 121 Query: 121 GREKLTDEALTERLEEWI 138 G EKL + + +++ +W+ Sbjct: 122 GTEKLPEPQVLQQITQWL 139 >UniRef50_Q5X687 Putative uncharacterized protein n=1 Tax=Legionella pneumophila str. Paris RepID=Q5X687_LEGPA Length = 151 Score = 122 bits (306), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 49/145 (33%), Positives = 86/145 (59%) Query: 3 DVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIF 62 D RS+ M+ + + + + E + L +GL +R+ D + G PD + +Y VIF Sbjct: 2 DKFPPKIRSEIMKRVKSNNNSPEIAIRKFLFNKGLRYRINDKDIFGTPDLFLKKYNAVIF 61 Query: 63 THGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGR 122 +GCFWH+H C L K+P T T +W+ K+ N ERD+R+I +L+++G+R+LI+W C+ G+ Sbjct: 62 YNGCFWHNHGCVLSKIPRTNTSYWINKLENNKERDKRNIEQLKKIGFRILIIWRCSHVGK 121 Query: 123 EKLTDEALTERLEEWICGEGASAQI 147 K + + + ++ WI + +I Sbjct: 122 NKTSLDQILNQIYSWILSDSTYKEI 146 >UniRef50_D1T035 DNA mismatch endonuclease Vsr n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1T035_9BURK Length = 152 Score = 122 bits (305), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 62/148 (41%), Positives = 82/148 (55%), Gaps = 3/148 (2%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M DV A RS+ M I +++ E + L G FR+ LPG PD + + Sbjct: 1 MVDVVSPAKRSQMMSGIKGKNSLPEMLVRKALFAMGHRFRLHRRDLPGTPDIAMPGRKIA 60 Query: 61 IFTHGCFWHHHH-CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 IF HGCFWH H C K P+TRTEFW K+ NV+RDRR +L E+GWRVL VWEC+ Sbjct: 61 IFVHGCFWHAHQGCKYAKTPSTRTEFWTTKLQGNVDRDRRAADKLAEMGWRVLNVWECST 120 Query: 120 RGREKLTDEALTERLEEWICGEGASAQI 147 R+ +T E L++ L WI + +I Sbjct: 121 --RDPVTAEGLSDALRAWIDSDAPVGEI 146 >UniRef50_Q5NYW8 Very short patch repair protein (DNA mismatch endonuclease) n=2 Tax=Proteobacteria RepID=Q5NYW8_AZOSE Length = 157 Score = 122 bits (305), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 59/124 (47%), Positives = 76/124 (61%), Gaps = 1/124 (0%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 MAD+ D ATRSK M +I ++T E ++ L G+ FR+ LPG PD V +YR Sbjct: 1 MADIVDPATRSKIMASIRGKNTKPELQVRRGLHQLGVRFRLHRRDLPGSPDLVFPKYRAA 60 Query: 61 IFTHGCFWHHH-HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 +F HGCFWH H C L P+ W+EK NVERDRR I+ LQ+ GWRV ++WECAL Sbjct: 61 LFVHGCFWHRHDSCRLAYTPSDNGHKWVEKFKANVERDRRQIALLQQAGWRVFVIWECAL 120 Query: 120 RGRE 123 R + Sbjct: 121 RAND 124 >UniRef50_C9L355 XorII very short patch repair endonuclease n=2 Tax=Bacteroidetes RepID=C9L355_9BACE Length = 138 Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 50/135 (37%), Positives = 84/135 (62%), Gaps = 3/135 (2%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M+D+ + RS M I+++DT E + L +G +R+ +LPG+PD V+ +Y+ + Sbjct: 1 MSDIFSQTKRSDIMSKISSKDTKPEILVRKFLFSKGFRYRINVKTLPGKPDIVLPKYKTI 60 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 IF +GCFWH H+C K+P++ T+FW EKI N RD ++ L +LGW+V+I+W+C + Sbjct: 61 IFVNGCFWHGHNCKKGKLPSSNTDFWKEKISNNKSRDAKNSDLLVKLGWKVIIIWQCEIS 120 Query: 121 ---GREKLTDEALTE 132 R K+ ++ L + Sbjct: 121 KIDNRTKILNKLLED 135 >UniRef50_A1B3R0 T/G mismatch-specific endonuclease n=2 Tax=Rhodobacteraceae RepID=A1B3R0_PARDP Length = 154 Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 65/148 (43%), Positives = 82/148 (55%), Gaps = 3/148 (2%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M D+ D+ TRS+ M I ++T E L L +G FR+ + GRPD + ++R V Sbjct: 1 MTDIVDQQTRSRMMSGIKGKNTKPELALRRALHSRGFRFRLHSGKVHGRPDLALPKHRAV 60 Query: 61 IFTHGCFWHHHH-CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 +F HGCFWH H C VPATR EFW K N RD +RL E GWRV VWECAL Sbjct: 61 VFVHGCFWHRHEGCRYATVPATRPEFWRAKFEANAARDSAVRTRLLEDGWRVATVWECAL 120 Query: 120 RGREKLTDEALTERLEEWICGEGASAQI 147 R E++ EA TE L W+ E +I Sbjct: 121 RKPEQV--EASTESLSIWLRTEELQIEI 146 >UniRef50_A5V0Q2 T/G mismatch-specific endonuclease n=3 Tax=Bacteria RepID=A5V0Q2_ROSS1 Length = 136 Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 56/129 (43%), Positives = 81/129 (62%), Gaps = 1/129 (0%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M DV + RS+ M + +T+ E+ + SL+ G FR+ LPG+PD V+ +++ V Sbjct: 1 MPDVFNPEERSRIMAKVRGENTSPERLVRSLIHKMGYRFRLNVKDLPGKPDIVLKKHKKV 60 Query: 61 IFTHGCFWHHHH-CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 IF HGCFWH H C P++ TE+W +K+ +N+ RDR + +L+ LGW VLIVWEC Sbjct: 61 IFVHGCFWHQHEGCPHAARPSSNTEYWNKKLDRNMLRDREHMHKLEYLGWNVLIVWECET 120 Query: 120 RGREKLTDE 128 R REKL D+ Sbjct: 121 RDREKLVDK 129 >UniRef50_A1U1D0 T/G mismatch-specific endonuclease n=2 Tax=Proteobacteria RepID=A1U1D0_MARAV Length = 137 Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 54/117 (46%), Positives = 73/117 (62%), Gaps = 1/117 (0%) Query: 10 RSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWH 69 RS+ MRA+ +RDT E + L GL + + D LPG PD V +YR V+F HGCFWH Sbjct: 8 RSRTMRAVRSRDTKPELTVRRFLHAAGLRYLLHDRRLPGSPDLVFPKYRTVVFVHGCFWH 67 Query: 70 HH-HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKL 125 H +C P T TE+W K+ +NVERD R+ + L+ GW VL++WEC +R R+ L Sbjct: 68 QHPNCAAASRPQTNTEYWSRKLTRNVERDERNRAELEASGWTVLVIWECEIRKRDAL 124 >UniRef50_B3QE76 DNA mismatch endonuclease Vsr n=1 Tax=Rhodopseudomonas palustris TIE-1 RepID=B3QE76_RHOPT Length = 152 Score = 119 bits (297), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 57/129 (44%), Positives = 75/129 (58%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M DV + R NM I +T E + S L G FR+ D LPG PD V+ +R V Sbjct: 1 MTDVLSREQRRFNMSRIRGSNTKPEVLVRSALHALGFRFRLHDRRLPGTPDIVLRRHRAV 60 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 IF +GCFWH H C K+P TR EFW +KI + RD I +L LGW V++VWEC+LR Sbjct: 61 IFVNGCFWHGHGCKYSKMPNTRAEFWRQKISRTKARDTAAIEQLLNLGWNVIVVWECSLR 120 Query: 121 GREKLTDEA 129 GR+++ + Sbjct: 121 GRDQVARNS 129 >UniRef50_Q21TW8 T/G mismatch-specific endonuclease n=5 Tax=Proteobacteria RepID=Q21TW8_RHOFD Length = 152 Score = 119 bits (297), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 62/139 (44%), Positives = 78/139 (56%), Gaps = 3/139 (2%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 MADV RS+ M I ++T E + +L G FR+ LPG PD V+ + Sbjct: 1 MADVVSPTVRSRMMSGIKGKNTQPEILVRRMLFASGYRFRLHRRDLPGTPDIVMPGRKIA 60 Query: 61 IFTHGCFWHHHH-CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 IF HGCFWH H C K+P TR +FW K+ N+ERDRR + RLQ LGWRVL VWEC+ Sbjct: 61 IFVHGCFWHFHRGCRFAKMPVTRADFWKAKLEANMERDRRAVERLQGLGWRVLCVWECST 120 Query: 120 RGREKLTDEALTERLEEWI 138 R+ +L L EWI Sbjct: 121 --RDAKATVSLQGTLCEWI 137 >UniRef50_B3EJE0 DNA mismatch endonuclease Vsr n=2 Tax=Bacteria RepID=B3EJE0_CHLPB Length = 153 Score = 117 bits (294), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 54/130 (41%), Positives = 74/130 (56%) Query: 3 DVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIF 62 DV RS NM I ++T E + L G +R+ LPG+PD V+ +YR VIF Sbjct: 2 DVLSPKQRSFNMSRIRGKNTRPEIMVRKWLWANGYRYRLHRKDLPGKPDIVLPKYRAVIF 61 Query: 63 THGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGR 122 HGCFWH H C P TR +FW K +NV RD+R+I L E WRV+++WEC+L G+ Sbjct: 62 VHGCFWHRHGCTFTTTPDTRRDFWYTKFEENVARDKRNIKYLLEQYWRVMVIWECSLIGK 121 Query: 123 EKLTDEALTE 132 ++ + E Sbjct: 122 NAAPEQVVVE 131 >UniRef50_Q1IIN5 T/G mismatch-specific endonuclease n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IIN5_ACIBL Length = 144 Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 58/125 (46%), Positives = 75/125 (60%), Gaps = 1/125 (0%) Query: 3 DVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIF 62 D KA RS NM I +T E + SLL G FR+ + +LPGRPD + +YR ++ Sbjct: 2 DSLSKARRSWNMSRIRATNTNPELIVRSLLHRLGFRFRLHERTLPGRPDLTLKKYRSIVL 61 Query: 63 THGCFWHHHH-CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRG 121 HGCFWH H C P + T FW +K NVERDRR+I L+ LGW+V+IVWEC R Sbjct: 62 VHGCFWHRHAGCPFAYTPKSNTIFWNKKFKANVERDRRNIHELRRLGWKVIIVWECQTRY 121 Query: 122 REKLT 126 E+L+ Sbjct: 122 GERLS 126 >UniRef50_A3WFL9 DNA mismatch endonuclease Vsr, putative n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WFL9_9SPHN Length = 154 Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 52/126 (41%), Positives = 78/126 (61%), Gaps = 1/126 (0%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M D+ D RS+ M I ++T E + LL G +R+ LPG+PD V+ ++R V Sbjct: 1 MVDIVDPQKRSEMMSGIGGKNTKPELFIRKLLHKGGFRYRLHRKDLPGKPDLVLGKWRTV 60 Query: 61 IFTHGCFWH-HHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 +F GCFWH H HC LF++P TR EFW +KI N+ RD + S+ + W+++ VWECA+ Sbjct: 61 LFVQGCFWHGHEHCPLFRLPKTRQEFWAKKIKSNIVRDDENRSKYLQTDWKLIEVWECAI 120 Query: 120 RGREKL 125 +G+ +L Sbjct: 121 KGKTRL 126 >UniRef50_B9E7L5 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E7L5_MACCJ Length = 175 Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 55/138 (39%), Positives = 80/138 (57%), Gaps = 3/138 (2%) Query: 4 VHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFT 63 V ++ T +K M A + + + E + L +G+ +R D PG PD + +Y+ +F Sbjct: 41 VMEEHTLNKTMVANSKKKSKPEDIVRKFLYSKGIRYRKNDKRFPGSPDIYIPKYKTAVFV 100 Query: 64 HGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGRE 123 +GCFWH H+C LF +P + EFW +K +NV RD R+I L ELG RV++VWEC L+ E Sbjct: 101 NGCFWHVHNCDLFVMPKSNQEFWEKKFNRNVSRDERNIEELTELGIRVIVVWECGLKPLE 160 Query: 124 KLTDEALTERLEEWICGE 141 + E E L E I GE Sbjct: 161 R---EETLEALYEMIIGE 175 >UniRef50_A9H9K5 DNA mismatch endonuclease Vsr n=4 Tax=Proteobacteria RepID=A9H9K5_GLUDA Length = 153 Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 55/130 (42%), Positives = 76/130 (58%), Gaps = 1/130 (0%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 MAD + RS+ M I ++DT E L L GL FR+ A LPGRPD V+ +R Sbjct: 1 MADFLEPLERSRRMGRIRSQDTKPEIALRRALHRLGLRFRLGGAGLPGRPDIVLPRHRAA 60 Query: 61 IFTHGCFWHHHH-CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 +F HGCFWH H C + P + T+FW+ + +NV RD + + LQELGW V ++WEC L Sbjct: 61 VFVHGCFWHRHPGCKVASTPKSNTDFWVARFDRNVARDGKVMRELQELGWNVFVIWECEL 120 Query: 120 RGREKLTDEA 129 + +L+ A Sbjct: 121 SAKSRLSPTA 130 >UniRef50_Q3IVR8 T/G mismatch-specific endonuclease n=4 Tax=Bacteria RepID=Q3IVR8_RHOS4 Length = 142 Score = 115 bits (288), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 53/125 (42%), Positives = 76/125 (60%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 MAD R + MRA+ T++T E + SLL +G +R+ SLPG+PD V Sbjct: 1 MADTRSPEQRRQIMRAVGTKNTGPELIVRSLLHAKGYRYRLHARSLPGQPDIVFPARHKA 60 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 IF +GCFWH H C ++P +R ++W KI NV RDRR +S L+ LGW+ L+VW+C L+ Sbjct: 61 IFVNGCFWHGHDCAKGRLPTSRLDYWGPKIEANVARDRRKLSELEALGWQTLVVWQCELK 120 Query: 121 GREKL 125 E++ Sbjct: 121 DIERV 125 >UniRef50_B4RGD5 Patch repair protein n=4 Tax=Bacteria RepID=B4RGD5_PHEZH Length = 164 Score = 115 bits (288), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 62/146 (42%), Positives = 74/146 (50%) Query: 2 ADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVI 61 AD R +NM AI +T E + L GL +R+ D LPG PD V R + Sbjct: 9 ADPLTPQQRRRNMAAIRAANTKPEMLVRRGLHAHGLRYRLHDRGLPGTPDLVFRSARVAV 68 Query: 62 FTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRG 121 F HGCFWH H C L P T +FW KI +N ERD + L LGWRV VWECALRG Sbjct: 69 FVHGCFWHGHDCSLGVRPRTNADFWTAKINRNRERDEAAEAALLMLGWRVATVWECALRG 128 Query: 122 REKLTDEALTERLEEWICGEGASAQI 147 RE+ RL +I SA + Sbjct: 129 RERPPLPETLGRLAAFIRSGSPSALV 154 >UniRef50_UPI000196BAC4 hypothetical protein CATMIT_00200 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196BAC4 Length = 137 Score = 114 bits (286), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 55/137 (40%), Positives = 82/137 (59%), Gaps = 5/137 (3%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M DV + RSK M I +D E + L G +R D SLPG PD V+ +YR V Sbjct: 1 MPDVFTQEQRSKVMSRIRGKDNKPETMVRKYLWHHGFRYRKNDKSLPGTPDIVILKYRTV 60 Query: 61 IFTHGCFWHHHH-CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 +F +GCFWHHH+ C + P +R E+W++ I +NVE D ++ + LQ+L ++V++VWEC + Sbjct: 61 VFINGCFWHHHYGCKYGRYPQSRKEYWIKHIDRNVENDVKNYNLLQQLDYKVIVVWECEI 120 Query: 120 R----GREKLTDEALTE 132 + R KL E +T+ Sbjct: 121 KEDFDHRMKLLIEEITQ 137 >UniRef50_A4G657 Very short patch repair protein (DNA mismatch endonuclease) (Vsr mismatch endonuclease) n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G657_HERAR Length = 152 Score = 114 bits (285), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 55/129 (42%), Positives = 83/129 (64%), Gaps = 3/129 (2%) Query: 3 DVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIF 62 D+ D TRS+ M I +++T E+ + S L +G +R+ D LPG+PD V+ ++ VIF Sbjct: 2 DIVDSLTRSRMMAGIRSKNTLPERLVRSFLHARGFRYRIHDKKLPGKPDIVLPKHCVVIF 61 Query: 63 THGCFWHHHH-CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRG 121 HGCFWH H C P T ++ W++K N ERD+R++ L+ LGWRV+++WEC L G Sbjct: 62 IHGCFWHQHPACKNAVKPKTNSQKWIQKFSDNEERDQRNLLALKALGWRVIVLWECGL-G 120 Query: 122 REKLTDEAL 130 R K++D+ L Sbjct: 121 R-KISDDQL 128 >UniRef50_A1A2S3 Possible XorII very-short-patch-repair endonuclease n=10 Tax=Bifidobacterium RepID=A1A2S3_BIFAA Length = 177 Score = 112 bits (281), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 60/143 (41%), Positives = 84/143 (58%), Gaps = 5/143 (3%) Query: 5 HDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTH 64 +++ TRS M I +DT+IE+ + S L +GL FR D PG PD V+ +YR +IF + Sbjct: 33 YERGTRSYTMSHIRGKDTSIERMVRSFLFAKGLRFRKNDKRYPGHPDVVLPKYRTIIFVN 92 Query: 65 GCFWHHHH--CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGR 122 GCFWH H +VP + EFW K+ +N ERD R + L+ GW+V++VWEC L Sbjct: 93 GCFWHMHEGCPKATRVPKSNVEFWTAKLLRNHERDARQRAELEADGWKVIVVWECEL--G 150 Query: 123 EKLTDEALTERLEEWICGEGASA 145 +K+ DE L ERL I + A Sbjct: 151 KKVRDERL-ERLYREIVDDSGKA 172 >UniRef50_Q9JWD6 Putative very short patch repair endonuclease n=18 Tax=Bacteria RepID=VSR_NEIMA Length = 140 Score = 112 bits (281), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 48/122 (39%), Positives = 76/122 (62%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M D+ + RS M I +++T E + L QG +R D G+PD V+ +Y+ V Sbjct: 1 MTDIFTTSKRSFVMLKIHSKETKPEVLVRKFLFFQGFRYRKNDKRYVGKPDIVLSKYKTV 60 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 +F HGCFW+ H C +P + T+FWLEKI KN ERD ++ + L+++G++V++VWEC L+ Sbjct: 61 VFIHGCFWYGHSCNKGHIPKSNTDFWLEKITKNCERDIKNETELEKIGFKVIVVWECELK 120 Query: 121 GR 122 + Sbjct: 121 NK 122 >UniRef50_B1J232 DNA mismatch endonuclease Vsr n=7 Tax=Bacteria RepID=B1J232_PSEPW Length = 167 Score = 112 bits (281), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 54/113 (47%), Positives = 67/113 (59%), Gaps = 1/113 (0%) Query: 6 DKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHG 65 ++ T S MR I T E + LL GL FR+ SLPG PD V+ + R V+F HG Sbjct: 24 NQFTASDRMRLIKREHTQPELVVRRLLHSMGLRFRLHSKSLPGSPDVVLPKRRTVVFVHG 83 Query: 66 CFWHHHH-CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWEC 117 C+WH H C P TR +FWL K NVERD R +L+ELGWRV++VWEC Sbjct: 84 CYWHRHPGCRYASTPKTRQDFWLPKFASNVERDNRKAEQLRELGWRVVVVWEC 136 >UniRef50_Q2S7T9 DNA G:T-mismatch repair endonuclease n=6 Tax=Proteobacteria RepID=Q2S7T9_HAHCH Length = 138 Score = 112 bits (280), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 56/128 (43%), Positives = 78/128 (60%), Gaps = 2/128 (1%) Query: 10 RSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWH 69 RS+ M A+ ++DT E ++ LL G +R+ LP +PD V + VIF HGCFWH Sbjct: 3 RSEIMAAVKSKDTTPELKVRKLLHSLGYRYRLHANDLPCKPDIVFRSRKKVIFIHGCFWH 62 Query: 70 HHHCYL-FKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDE 128 H C ++P T E+W++KIG+N+ERDRR L +LGWR L++WEC L+ + L E Sbjct: 63 GHPCKRGARMPKTNAEYWIKKIGRNIERDRRGYEALHQLGWRCLVLWECELKDMDAL-QE 121 Query: 129 ALTERLEE 136 L LEE Sbjct: 122 TLHAFLEE 129 >UniRef50_Q31CG2 T/G mismatch-specific endonuclease n=5 Tax=Bacteria RepID=Q31CG2_PROM9 Length = 138 Score = 112 bits (279), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 51/123 (41%), Positives = 71/123 (57%), Gaps = 1/123 (0%) Query: 10 RSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWH 69 RS+NM AI +++T E + LL G FR+ LPG PD V+ +Y+ VIF HGCFWH Sbjct: 13 RSRNMSAIKSKNTKPEIAVRKLLHSMGFRFRLHRKDLPGSPDIVLPKYKTVIFVHGCFWH 72 Query: 70 -HHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDE 128 H +C P TR EFW K NV+RD +++ +GW+ +++WEC L + L D Sbjct: 73 RHENCKYASNPKTRKEFWKSKFKANVKRDLEIQEKIKNIGWQSVVIWECELTKIQYLKDT 132 Query: 129 ALT 131 L Sbjct: 133 FLN 135 >UniRef50_Q5ZW52 Patch repair protein n=2 Tax=Legionella RepID=Q5ZW52_LEGPH Length = 142 Score = 111 bits (277), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 51/122 (41%), Positives = 74/122 (60%), Gaps = 3/122 (2%) Query: 3 DVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIF 62 D+ K RS M +I ++T E + S L QGL FR+ +LPG+PD V +Y V+F Sbjct: 7 DMISKKQRSHIMSSIKGKNTKPEIIVRSFLHRQGLRFRLHSKNLPGQPDLVFRKYNAVVF 66 Query: 63 THGCFWHHHH---CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 +GCFWH H+ C +P T E+W KI +N RD+++I L++LGWRV ++WEC L Sbjct: 67 VNGCFWHGHNEPLCKNSHIPKTNFEYWWNKIERNKSRDKQNIEILKQLGWRVFMIWECEL 126 Query: 120 RG 121 + Sbjct: 127 KN 128 >UniRef50_D2LK67 DNA mismatch endonuclease Vsr n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LK67_RHOVA Length = 165 Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 59/145 (40%), Positives = 78/145 (53%), Gaps = 6/145 (4%) Query: 8 ATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCF 67 RS+ M+A+ + TA E + L G FRVQ LPG PD V+ +++ VIF HGCF Sbjct: 18 PVRSRIMQAVGQKHTAPEMTVRRTLYALGYRFRVQRRDLPGSPDIVLRKHKTVIFVHGCF 77 Query: 68 WHHHH-CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLT 126 WH H C +P TR EFW EK +NV RD+ L+++GW+VLIVWEC E + Sbjct: 78 WHRHPLCKKATMPKTRLEFWTEKFDRNVARDQLTEIALRKMGWQVLIVWEC-----ETKS 132 Query: 127 DEALTERLEEWICGEGASAQIDTQG 151 E L +L E + D G Sbjct: 133 VEILAAKLASAFTAEAYPSDSDLSG 157 >UniRef50_D1QVC0 Patch repair protein n=1 Tax=Prevotella oris F0302 RepID=D1QVC0_9BACT Length = 172 Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 50/125 (40%), Positives = 69/125 (55%), Gaps = 1/125 (0%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M+D H R NM AI +DT E + L G +R+ LPGRPD V+ +YR Sbjct: 1 MSDTHTPQQRHANMAAIHGKDTKPELVVRKWLWNHGYRYRLNHPRLPGRPDIVLRKYRTC 60 Query: 61 IFTHGCFWH-HHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 IF +GCFWH H C + VP T EFW+ KI +N +RD +L +GW + +WEC L Sbjct: 61 IFVNGCFWHGHEGCKYYTVPKTNMEFWINKIRRNRKRDHEVCQKLSSMGWHCITIWECEL 120 Query: 120 RGREK 124 + ++ Sbjct: 121 KSYDR 125 >UniRef50_D1BA88 DNA mismatch endonuclease Vsr n=6 Tax=Bacteria RepID=D1BA88_THEAS Length = 147 Score = 108 bits (271), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 48/119 (40%), Positives = 73/119 (61%), Gaps = 1/119 (0%) Query: 3 DVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIF 62 D H K RS NM I +++ E+ + L +G +R +LPG PD V+ +Y+ VIF Sbjct: 2 DNHTKEIRSYNMSRIRSKNNKPEELVRKYLFSKGFRYRKNVKALPGCPDIVLPKYKTVIF 61 Query: 63 THGCFWHHHH-CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 +GCFWH H C F P + E+W +K+ +N ERD + +L+++GW+V+IVWEC L+ Sbjct: 62 INGCFWHMHEGCPFFVWPKSNEEYWTKKLIRNKERDYENQEKLKQMGWKVIIVWECELK 120 >UniRef50_C7LPG4 DNA mismatch endonuclease Vsr n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LPG4_DESBD Length = 154 Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 50/124 (40%), Positives = 72/124 (58%), Gaps = 1/124 (0%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M D+ +A RS M + + +T E+ L S L G +R+ +LPG+PD V +Y+ V Sbjct: 1 MTDILSQAERSVLMSKVKSTNTKPERILRSGLHRLGFRYRLNYKALPGKPDLVFPKYKAV 60 Query: 61 IFTHGCFWHHH-HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 IF HGC+WH H C P T +FW K +N+ RD+ S L ++GWR LIVWEC L Sbjct: 61 IFVHGCYWHRHVGCKHASTPNTNVDFWNLKFSENINRDKFVESELMKMGWRFLIVWECEL 120 Query: 120 RGRE 123 + ++ Sbjct: 121 KKKK 124 >UniRef50_Q28ND8 T/G mismatch-specific endonuclease n=1 Tax=Jannaschia sp. CCS1 RepID=Q28ND8_JANSC Length = 156 Score = 106 bits (264), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 54/120 (45%), Positives = 67/120 (55%), Gaps = 1/120 (0%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M D+ TRS+ M +I R+T E + L G FR+ SLPG PD V+ ++R Sbjct: 1 MVDIVSAETRSRMMASIRRRNTKPEMVVRQELHAAGFRFRLDVRSLPGSPDIVLPKWRTA 60 Query: 61 IFTHGCFWHHHH-CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 IF HGCFWH H C PATR +FW K NV RD + L E+GW+V IVWEC L Sbjct: 61 IFVHGCFWHRHAGCKYASTPATRPKFWQAKFEANVRRDCSNERALIEMGWKVAIVWECGL 120 >UniRef50_B7GPI0 DNA mismatch endonuclease vsr n=12 Tax=cellular organisms RepID=B7GPI0_BIFLI Length = 171 Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 79/143 (55%), Gaps = 3/143 (2%) Query: 5 HDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTH 64 +++ TRS M I +DT IE + S L +GL FR D PG PD V+ +Y ++F + Sbjct: 31 YERGTRSYTMSHIRGKDTKIEVLVRSYLFRKGLRFRKNDKRYPGHPDVVLPKYHTIVFVN 90 Query: 65 GCFWHHHH-CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGRE 123 GCFWH H C +P + EFW K+ +N RD + L+ GWRV+ VWEC L + Sbjct: 91 GCFWHMHEGCSKHSMPKSNVEFWQAKLLRNHNRDIAQRAELEAAGWRVITVWECEL--TK 148 Query: 124 KLTDEALTERLEEWICGEGASAQ 146 + DE L E+ + G+ SA+ Sbjct: 149 AVRDERLARLYEQIVEGDADSAE 171 >UniRef50_A3N1K2 Putative DNA mismatch endonuclease n=2 Tax=Actinobacillus pleuropneumoniae RepID=A3N1K2_ACTP2 Length = 141 Score = 105 bits (262), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 47/122 (38%), Positives = 71/122 (58%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M D+ RS+ M + +++T E + + L G +R D G PD ++ +Y+ Sbjct: 1 MTDIFSPQKRSEIMSRVKSKNTKPEIIVRTFLFSVGFRYRKNDKRYAGVPDILLPKYKTA 60 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 IF HGCFWH H C +P++RTEFW KI KN ERD ++I L++ G V+I+WEC L+ Sbjct: 61 IFVHGCFWHGHTCAKGGLPSSRTEFWKNKIMKNKERDVKNIRLLEDSGIHVIIIWECELK 120 Query: 121 GR 122 + Sbjct: 121 NK 122 >UniRef50_A2SSP3 T/G mismatch-specific endonuclease n=1 Tax=Methanocorpusculum labreanum Z RepID=A2SSP3_METLZ Length = 151 Score = 105 bits (261), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 48/111 (43%), Positives = 70/111 (63%), Gaps = 1/111 (0%) Query: 10 RSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWH 69 RS M + ++ T E+ +AS L + +R LPG+PDFV+ +YR VIF +GCFWH Sbjct: 9 RSWMMSRVRSKKTKPEQLVASYLRESHIGYRRCRTDLPGKPDFVLSKYRAVIFVNGCFWH 68 Query: 70 -HHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 H C +P T TE+W+ K +N RD R+ ++L+E+GWRV ++WEC L Sbjct: 69 GHAGCKRATIPKTNTEWWIAKFQQNKLRDERNYAQLREMGWRVFVIWECEL 119 >UniRef50_A3PQ65 T/G mismatch-specific endonuclease n=1 Tax=Rhodobacter sphaeroides ATCC 17029 RepID=A3PQ65_RHOS1 Length = 144 Score = 105 bits (261), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 53/128 (41%), Positives = 66/128 (51%), Gaps = 1/128 (0%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M D RS+NM I RDT E R+ S G GL FR+ LPG PD V R Sbjct: 2 MTDSLTPDARSRNMAKIRGRDTGPEMRVRSAAHGLGLRFRLYRRGLPGTPDLVFPSRRVA 61 Query: 61 IFTHGCFWHHHH-CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 +F HGCFWH H C P +R +FW K NV RD R L+ GW+ + +WEC Sbjct: 62 LFVHGCFWHRHPGCRFAYTPKSRVDFWEAKFEGNVSRDLRKNEDLEAAGWKSVTIWECET 121 Query: 120 RGREKLTD 127 R +KL++ Sbjct: 122 REPDKLSE 129 >UniRef50_Q027Y0 T/G mismatch-specific endonuclease n=2 Tax=Acidobacteria RepID=Q027Y0_SOLUE Length = 138 Score = 104 bits (260), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 50/116 (43%), Positives = 68/116 (58%), Gaps = 1/116 (0%) Query: 10 RSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWH 69 RS NMR I +RDT+ E + L+ G FR+ A+LPG+PD V+ + +I GCFWH Sbjct: 9 RSANMRRIRSRDTSPEIAVRRLVHSMGFRFRLHVATLPGKPDIVLPRLKRIIEVRGCFWH 68 Query: 70 HHH-CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREK 124 H C +P +RTE+W K+ KN RD ++++L GW L VWEC L EK Sbjct: 69 QHPGCIDSHIPKSRTEYWESKLTKNQRRDEENLAKLTAAGWTALTVWECQLSDSEK 124 >UniRef50_C7RCX3 DNA mismatch endonuclease Vsr n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RCX3_KANKD Length = 151 Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 56/153 (36%), Positives = 82/153 (53%), Gaps = 5/153 (3%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M+ K +RS+ M I + DT E ++ + G + ++D +PD V+ + Sbjct: 1 MSSKSGKLSRSEMMSRIRSFDTKPEIKVRKAIYHLGYRYILKDKVKGTKPDIVLRKQGVA 60 Query: 61 IFTHGCFWHHHH-CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 IF HGCFWH H C +P TR E+W K+ KNVERDR+ +LQ GWR+ ++WECA Sbjct: 61 IFVHGCFWHRHSGCKYASMPKTRREYWWPKLSKNVERDRKVNFKLQLEGWRIAVIWECAT 120 Query: 120 RGREKLTDEALTERLEEWICGEGASAQIDTQGI 152 R +E E L EWI + +S ++Q I Sbjct: 121 RDKELF--EKTMNSLNEWI--QSSSDYYESQSI 149 >UniRef50_UPI00016AF703 DNA mismatch endonuclease vsr n=2 Tax=pseudomallei group RepID=UPI00016AF703 Length = 146 Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 54/131 (41%), Positives = 74/131 (56%), Gaps = 6/131 (4%) Query: 11 SKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHH 70 S+ MR I +RDTA E + L G +R+ SLPG PD V R +F HGCFWH Sbjct: 22 SERMRRIRSRDTAPEWIVRRTLWRMGYRYRLHVKSLPGTPDIVFARRRKALFVHGCFWHQ 81 Query: 71 HHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEAL 130 H C L +P T ++W K+ +N+ERD + +L++ GW VL+VWEC + E L Sbjct: 82 HGCSLTNLPKTNIDYWHPKLHRNIERDAAAMLQLEKAGWSVLVVWEC------ESALEDL 135 Query: 131 TERLEEWICGE 141 ERL ++ GE Sbjct: 136 PERLRLFLDGE 146 >UniRef50_C5B599 DNA mismatch endonuclease vsr n=2 Tax=Methylobacterium RepID=C5B599_METEA Length = 150 Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 54/116 (46%), Positives = 60/116 (51%), Gaps = 1/116 (0%) Query: 3 DVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIF 62 D D A RS M I DT E + G FR+ SLPGRPD V R IF Sbjct: 2 DTLDPARRSALMGRIRGVDTGPEMAVRRAAHRLGYRFRLHRRSLPGRPDLVFPSRRAAIF 61 Query: 63 THGCFWHHHH-CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWEC 117 HGCFWH H C P TR EFW K +NVERD + RL GWRVL++WEC Sbjct: 62 VHGCFWHRHEGCSKASTPKTRVEFWQAKFARNVERDAQVQERLATAGWRVLVIWEC 117 >UniRef50_C5APE9 Very-short-patch-repair endonuclease n=1 Tax=Methylobacterium extorquens AM1 RepID=C5APE9_METEA Length = 146 Score = 101 bits (251), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 55/142 (38%), Positives = 79/142 (55%), Gaps = 11/142 (7%) Query: 9 TRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFW 68 R K M AI ++DT E+ + L G FR+ LPGRPD R IF HGCFW Sbjct: 9 ARRKIMSAIRSKDTKPERSVRRLAHSLGYRFRLHGKDLPGRPDIFFPGRRKAIFVHGCFW 68 Query: 69 HHH---HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKL 125 H H C +P TR ++W+ K+ +NV RD R+++ L GW L++WEC +L Sbjct: 69 HQHPSDECRPSALPRTRRDYWVPKLERNVARDARNMTDLAAAGWDALVIWEC------EL 122 Query: 126 TD-EALTERLEEWICGEGASAQ 146 +D EA+ +RL ++ G+ A A+ Sbjct: 123 SDLEAVADRLRRFL-GDSAIAR 143 >UniRef50_A3ZZ75 Patch repair protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZZ75_9PLAN Length = 146 Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 48/118 (40%), Positives = 68/118 (57%), Gaps = 2/118 (1%) Query: 2 ADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVI 61 D+ D TRS+ MR + + DT E+ + SL G FR+ LPG PD VI Sbjct: 5 TDIFDPETRSEIMRRVRSSDTRPERIVRSLAHRLGYRFRLGRRDLPGSPDLTFPGRGKVI 64 Query: 62 FTHGCFWHHHHCYLFK--VPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWEC 117 F HGCFWH H C + +P ++W +K+ +N +RDR+ + L++LGW+ LIVWEC Sbjct: 65 FVHGCFWHQHDCARGRRPLPKQNADYWRKKLSRNQQRDRQTLKSLRKLGWKTLIVWEC 122 >UniRef50_C9RP57 DNA mismatch endonuclease Vsr n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RP57_FIBSS Length = 168 Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 47/112 (41%), Positives = 64/112 (57%) Query: 9 TRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFW 68 TRS+ M+A+ + DT E + L G +R+ LPG PD V +Y IF +GCFW Sbjct: 25 TRSQMMQAVHSEDTKPEMIVRKALFEAGFRYRLHRRDLPGTPDIFVQKYGVAIFVNGCFW 84 Query: 69 HHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 H H C L P + + FW +K +N+ RD + L LG+RV IVWEC+LR Sbjct: 85 HQHGCKLTSRPKSNSAFWNDKFDRNIVRDIKTQHELSLLGYRVAIVWECSLR 136 >UniRef50_Q56829 XorII very short patch repair endonuclease n=16 Tax=Proteobacteria RepID=VSX2_XANOR Length = 136 Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 48/119 (40%), Positives = 66/119 (55%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M D R M+ + +++T EK + SLL G FR+ LPG PD V R V Sbjct: 1 MTDRLSPERRRYLMQQVRSKNTRPEKAVRSLLHSIGYRFRLHRKDLPGTPDIVFPSRRLV 60 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 +F HGCFWH H C + ++P +R ++W KI N RD+R + L GWRV +VW+C L Sbjct: 61 LFVHGCFWHGHGCRIGQLPKSRLDYWSPKIEANRARDQRKEAALAAEGWRVAVVWQCEL 119 >UniRef50_A5EB61 T/G mismatch-specific endonuclease n=2 Tax=Bradyrhizobiaceae RepID=A5EB61_BRASB Length = 147 Score = 98.6 bits (244), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 48/118 (40%), Positives = 64/118 (54%), Gaps = 1/118 (0%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M D + RS M I +DT E R+ ++ GL FR+ L G PD V +++ Sbjct: 1 MMDRLTSSQRSAVMARIQGKDTTPEMRVRTIAHAMGLRFRLHRGDLKGTPDLVFPKHKTA 60 Query: 61 IFTHGCFWHHHH-CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWEC 117 +F HGCFWH H C +P TR EFW +K+ +NV RD +L GWRV I+WEC Sbjct: 61 LFVHGCFWHRHPGCKRASMPQTREEFWRKKLAQNVARDAEATLQLSSEGWRVQIIWEC 118 >UniRef50_Q64Q05 Putative very-short-patch-repair endonuclease n=4 Tax=Bacteroides RepID=Q64Q05_BACFR Length = 171 Score = 98.2 bits (243), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 50/118 (42%), Positives = 65/118 (55%), Gaps = 1/118 (0%) Query: 3 DVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIF 62 D+ +K RS M I +DT E + L +G +R LPG PD V+ +Y VIF Sbjct: 2 DIWNKKKRSAVMAKIKGKDTKPEWIVRRYLFSRGYRYRKNVKGLPGTPDIVLRKYGIVIF 61 Query: 63 THGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 HGCFWH H +P T EFW KI N RD R+ L+++GW V+IVWEC L+ Sbjct: 62 IHGCFWHGHEV-DGTMPKTNREFWKNKIEGNKLRDERNKEELRKMGWSVIIVWECQLK 118 >UniRef50_A0LM24 T/G mismatch-specific endonuclease n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LM24_SYNFM Length = 129 Score = 97.8 bits (242), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 49/126 (38%), Positives = 69/126 (54%), Gaps = 6/126 (4%) Query: 14 MRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHH- 72 M I +T E + L G FR+ + LPG+PD V+ +++ IF HGCFWH H Sbjct: 1 MSRIHGTNTKPELEVRRRLHSMGFRFRLHCSKLPGKPDIVLPKHKKAIFVHGCFWHGHQG 60 Query: 73 CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTE 132 C K P++ +FW KI K VERDR + L ELGW+ L +W C ++ E L + Sbjct: 61 CKRSKPPSSNVQFWTAKIAKTVERDRNNRKALVELGWQALTIWSCEIK-----NTEFLEK 115 Query: 133 RLEEWI 138 RL E++ Sbjct: 116 RLREFL 121 >UniRef50_C9PU27 Putative uncharacterized protein n=1 Tax=Prevotella sp. oral taxon 472 str. F0295 RepID=C9PU27_9BACT Length = 159 Score = 97.8 bits (242), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 44/112 (39%), Positives = 64/112 (57%), Gaps = 1/112 (0%) Query: 14 MRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHH- 72 M ++ ++ T E + L QG +R+ LPG PD V+ +YR IF +GCFWH H Sbjct: 1 MASVKSKGTKPELLVRKFLWAQGFRYRLNSDRLPGHPDLVLRKYRTCIFVNGCFWHGHEG 60 Query: 73 CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREK 124 C + +P T T FW +K+ +N +RD +L +GW L+VWEC LR R + Sbjct: 61 CKRWTLPKTNTPFWEKKVKRNQQRDAETQRQLARMGWHCLVVWECQLRPRHR 112 >UniRef50_B5JQD1 DNA mismatch endonuclease Vsr family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JQD1_9BACT Length = 153 Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 45/111 (40%), Positives = 67/111 (60%), Gaps = 4/111 (3%) Query: 14 MRAIATRDTAIEKRLASLLTGQGLAFRV---QDASLPGRPDFVVDEYRCVIFTHGCFWHH 70 M + ++ T E+ + SLL G F V ++ +LPGRPD V+ + VIF HGCFWH Sbjct: 1 MSRVTSKHTKPERLVRSLLHRIGYRFTVNGPKNKNLPGRPDIVLPSRQAVIFVHGCFWHR 60 Query: 71 HH-CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 H C P + T +WL+K +N++RDR+ L +LGW+V+ +WEC L+ Sbjct: 61 HTGCKSATTPKSNTSYWLKKFERNIQRDRQTRQALVKLGWQVITIWECELK 111 >UniRef50_C9MXV4 Patch repair protein n=2 Tax=Leptotrichia hofstadii F0254 RepID=C9MXV4_9FUSO Length = 193 Score = 94.7 bits (234), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 44/112 (39%), Positives = 64/112 (57%), Gaps = 1/112 (0%) Query: 9 TRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFW 68 TRS+NM I +++T E + LL G +RV + LPG PD + +Y IF +GCFW Sbjct: 38 TRSQNMARIKSKNTKPEIYIRKLLYKMGYRYRVNYSELPGTPDIFILKYNTAIFVNGCFW 97 Query: 69 H-HHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 H H +C + P T E+W +K +NVERD +L E+ V+ +WEC + Sbjct: 98 HRHENCKVATFPKTHAEYWEKKFRRNVERDIEVREKLFEMDISVITIWECEI 149 >UniRef50_C6BBA5 DNA mismatch endonuclease Vsr n=1 Tax=Ralstonia pickettii 12D RepID=C6BBA5_RALP1 Length = 131 Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 47/109 (43%), Positives = 57/109 (52%), Gaps = 1/109 (0%) Query: 14 MRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHH- 72 MR + + DT E + S L G FR+ D LPG PD V + IF HGCFWH H Sbjct: 1 MRRVRSADTRPEMVVRSTLHRLGYRFRLHDKRLPGSPDIVFRSRKIAIFVHGCFWHRHPG 60 Query: 73 CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRG 121 C P T TEFW K KN+ RD ++L LGW +VWEC L+ Sbjct: 61 CSRATTPRTNTEFWQCKFNKNIARDTEVCTKLHALGWTTYVVWECELKS 109 >UniRef50_A6E296 Very short patch repair protein (DNA mismatch endonuclease) n=1 Tax=Roseovarius sp. TM1035 RepID=A6E296_9RHOB Length = 115 Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 47/115 (40%), Positives = 59/115 (51%), Gaps = 1/115 (0%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M D RSK M + ++D+ E L L +G V LPG PD V R V Sbjct: 1 MTDTVTSEVRSKIMARVRSKDSKAEVTLRKALHARGFRCLVNRRGLPGTPDLVFPRRRAV 60 Query: 61 IFTHGCFWHHH-HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIV 114 +F H CFW+ H C PAT FW EK +N+ERD R I+ L+ LGWRV +V Sbjct: 61 LFVHVCFWYRHDECRKATTPATNEAFWTEKFKRNIERDARKIAELEALGWRVEVV 115 >UniRef50_B3Q989 DNA mismatch endonuclease Vsr n=4 Tax=Rhodopseudomonas palustris RepID=B3Q989_RHOPT Length = 138 Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 46/113 (40%), Positives = 57/113 (50%), Gaps = 1/113 (0%) Query: 10 RSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWH 69 RS MR + T E +A++L GL FR SLPG PDF + IF HGCFWH Sbjct: 14 RSALMRRVRQTGTKAEDEVAAILRQSGLRFRRNVKSLPGSPDFANKTNQWAIFVHGCFWH 73 Query: 70 HHH-CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRG 121 H C P +FWL K NV RD L+ +G++VL +WEC R Sbjct: 74 RHEGCPRTTTPTRNRDFWLAKFAANVNRDTIKARLLRAMGFKVLTIWECETRN 126 >UniRef50_Q2IF54 T/G mismatch-specific endonuclease n=1 Tax=Anaeromyxobacter dehalogenans 2CP-C RepID=Q2IF54_ANADE Length = 148 Score = 89.4 bits (220), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 50/129 (38%), Positives = 68/129 (52%), Gaps = 2/129 (1%) Query: 4 VHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFT 63 V D+AT SK + + RDT E + +L G G +R LPG PD V R +F Sbjct: 13 VRDEAT-SKRLGRVRQRDTGPELIVRRMLHGLGGRYRRSSKKLPGSPDIVNWSRRWAVFV 71 Query: 64 HGCFWH-HHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGR 122 HGCFWH H+ C VP FWL K+ N RD R I+ L+ LG+R +++WEC + R Sbjct: 72 HGCFWHWHNDCGRASVPKRNRAFWLAKLNANRRRDCRVIADLEALGFRTMVLWECEIEER 131 Query: 123 EKLTDEALT 131 + L+ Sbjct: 132 PLDVERKLS 140 >UniRef50_Q1D6D6 Very short patch repair protein n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1D6D6_MYXXD Length = 182 Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 48/108 (44%), Positives = 62/108 (57%), Gaps = 1/108 (0%) Query: 9 TRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFW 68 +RS+ M I RDT+ E+ L S L GL FR+ + GRPD V ++ +F GCFW Sbjct: 4 SRSEQMSRIRGRDTSPERLLRSALWRAGLRFRLHTRTTHGRPDVVFPRHKVAVFIDGCFW 63 Query: 69 HHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWE 116 H + + P TR EFW K+ +NVERDRR L+E GWRV WE Sbjct: 64 HGCPKHYVR-PRTRDEFWSSKLRENVERDRRQTLLLEEGGWRVCRFWE 110 >UniRef50_C4FAH6 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FAH6_9ACTN Length = 276 Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 47/121 (38%), Positives = 66/121 (54%), Gaps = 3/121 (2%) Query: 2 ADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGL-AFRVQDASLPGRPDFVVDEYRCV 60 A V +A K+M+ RDT E + L GL +R+ A PGRPD + Sbjct: 137 ALVKRRAAVRKSMQGNKRRDTKPELLVRQRLRAAGLTGYRLDWAKAPGRPDIAFPGRKIA 196 Query: 61 IFTHGCFWHH-HHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 IF +GC+WH HC +P+ EFW K +NVERD+R ++ L+ELGW + +WEC L Sbjct: 197 IFVNGCYWHRCPHCNP-SMPSKNVEFWEAKFRRNVERDKRALAELEELGWCAITIWECEL 255 Query: 120 R 120 + Sbjct: 256 K 256 >UniRef50_C7N4R6 T/G mismatch-specific endonuclease n=3 Tax=Coriobacteriaceae RepID=C7N4R6_SLAHD Length = 146 Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 46/113 (40%), Positives = 65/113 (57%), Gaps = 4/113 (3%) Query: 12 KNMRAIATRDTAIEKRLASLLTGQGL-AFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHH 70 K+M + ++T E + L GL +RV +PG PD + IF HGCFWH Sbjct: 17 KSMTSNKGKNTKPELLVRKRLREDGLLGYRVH-WKVPGHPDVAWPGKKVAIFVHGCFWHR 75 Query: 71 -HHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGR 122 HC L VP T E+W+ K +NVERDR +I++L+ GWRV ++WEC L+ + Sbjct: 76 CPHCQL-PVPKTNQEYWIPKFERNVERDRENIAKLESDGWRVHVIWECELKKK 127 >UniRef50_C4RRL0 XorII-short-patch-repair endonuclease n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RRL0_9ACTO Length = 155 Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 48/121 (39%), Positives = 68/121 (56%), Gaps = 3/121 (2%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGL-AFRVQDASLPGRPDFVVDEYRC 59 M D +A RS+ M AI +++T E L L G+ +R+ ASLPG+PD +R Sbjct: 13 MPDHLSRAGRSRVMAAIRSKNTKPELMLRQALRTSGVTGYRIHLASLPGKPDIAFTRWRL 72 Query: 60 VIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 IF G FWH H + FK P + +W EKI +N ERD R+ + L +GW VL VW+ + Sbjct: 73 AIFVDGVFWHGHPDH-FK-PQLASPYWREKIARNQERDMRNDAALAAIGWTVLRVWDTQV 130 Query: 120 R 120 + Sbjct: 131 K 131 >UniRef50_B8HDH1 DNA mismatch endonuclease Vsr n=4 Tax=Bacteria RepID=B8HDH1_ARTCA Length = 144 Score = 85.5 bits (210), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 48/133 (36%), Positives = 66/133 (49%), Gaps = 5/133 (3%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDAS----LPGRPDFVVDE 56 MAD RS NM I ++T E + LL +G +R+ A+ LPG PD V Sbjct: 1 MADRLTPEQRSWNMSRIRGKNTKPELLVRRLLHAKGYRYRLHGAARGGKLPGNPDLVFAG 60 Query: 57 YRCVIFTHGCFWHHHHCYLFK-VPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVW 115 VIF +GCFWH H C + + P FW +K + ERD +L++ GW VL +W Sbjct: 61 RHKVIFVNGCFWHFHDCRVGQHAPKANAGFWADKRNRTRERDAGQRRQLEDAGWEVLTIW 120 Query: 116 ECALRGREKLTDE 128 EC L+ L + Sbjct: 121 ECELKDSSALESQ 133 >UniRef50_C0EI85 Putative uncharacterized protein n=2 Tax=Clostridium RepID=C0EI85_9CLOT Length = 141 Score = 85.1 bits (209), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 42/124 (33%), Positives = 67/124 (54%), Gaps = 2/124 (1%) Query: 1 MADVHDKATRSKNMRAI-ATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRC 59 MADV DK TRS M+ + + + + E RL +L G+ ++ + G PDFV + Sbjct: 1 MADVFDKETRSSIMKKVHSAGNKSTEMRLITLFQENGITGWRRNYKVKGHPDFVFLNKKI 60 Query: 60 VIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 IF GCFWH H C + P ++W +K +N++RD+ + + GW V+ +WEC L Sbjct: 61 AIFVDGCFWHGHDCRNTR-PKDNEDYWKKKRERNIKRDKEVTALFESRGWTVIRIWECEL 119 Query: 120 RGRE 123 + + Sbjct: 120 KKKN 123 >UniRef50_A9ADY1 DNA mismatch endonuclease Vsr n=2 Tax=Burkholderia multivorans ATCC 17616 RepID=A9ADY1_BURM1 Length = 147 Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 46/121 (38%), Positives = 63/121 (52%), Gaps = 2/121 (1%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 +A K T+S+ M + +R+TA E L L QGL +R+ LPG PD R Sbjct: 12 VAQSSRKLTKSEQMARVRSRNTAPELALRRALWHQGLRYRL-TPKLPGTPDLCFVTKRVA 70 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 IF GCFWH + + PA EFW K+ N+ RDR+ + L+ GW V+ VWE L+ Sbjct: 71 IFVDGCFWHGCPQH-YSAPAQNAEFWSHKVASNITRDRKADAALEAEGWTVMRVWEHELK 129 Query: 121 G 121 Sbjct: 130 S 130 >UniRef50_D2BGG7 Vsr domain protein T:G mismatch repair endonuclease n=1 Tax=Dehalococcoides sp. VS RepID=D2BGG7_DEHSV Length = 138 Score = 81.6 bits (200), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 43/116 (37%), Positives = 64/116 (55%), Gaps = 2/116 (1%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M D RS M I +DT +E R+ S L QGL FR LPG+PD V + + Sbjct: 1 MPDNLTPEQRSYCMSRIKGKDTGLEMRVRSALHEQGLRFRKNVKWLPGKPDIVFSKAKVA 60 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWE 116 +F G FWH + L++ ++FW +KI KN ERD ++ +L+ +GW V+ +W+ Sbjct: 61 VFVDGDFWHGYRFPLWQNKV--SDFWKKKISKNRERDIKNHRKLRRMGWTVIRLWQ 114 >UniRef50_B8G3L1 DNA mismatch endonuclease Vsr n=1 Tax=Chloroflexus aggregans DSM 9485 RepID=B8G3L1_CHLAD Length = 138 Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 46/126 (36%), Positives = 67/126 (53%), Gaps = 1/126 (0%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDA-SLPGRPDFVVDEYRC 59 M+D R K M+A+ + T +EKRL ++L G GL ++A ++ G+PD R Sbjct: 1 MSDNLSPQDRHKTMQAVKGKGTRLEKRLWAMLAGLGLKGWKKNADNIVGKPDVAFLNQRI 60 Query: 60 VIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 IF GCFWH K+P T E+W KI +N+E R +LQ GW V+ +WE + Sbjct: 61 AIFIDGCFWHGCPYCKRKLPKTNREYWERKINRNIELARLHDEQLQREGWIVIRIWEHEM 120 Query: 120 RGREKL 125 EK+ Sbjct: 121 ADIEKV 126 >UniRef50_C9S232 DNA mismatch endonuclease Vsr n=2 Tax=Geobacillus RepID=C9S232_GEOSY Length = 141 Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 41/121 (33%), Positives = 69/121 (57%), Gaps = 4/121 (3%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 ++D K RS+ M+AI +R + +E ++ L +G FR D +L G+PD + +Y+ V Sbjct: 4 LSDNLTKEQRSRTMKAIKSR-SQLEDVVSKALWREGYRFRKNDKTLLGKPDISIKKYKVV 62 Query: 61 IFTHGCFWHHHHCYLF-KVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 IF CFW H C L +P + ++W +K+ +N ERD+ +++GW L +WE L Sbjct: 63 IFIDSCFW--HGCPLHGNMPESNRDYWEKKLSRNKERDQEVNDYYRKIGWNCLRIWEHDL 120 Query: 120 R 120 + Sbjct: 121 K 121 >UniRef50_Q8EL90 Very-short-patch-repair endonuclease n=3 Tax=Bacillaceae RepID=Q8EL90_OCEIH Length = 140 Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 40/122 (32%), Positives = 68/122 (55%), Gaps = 4/122 (3%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M+D+ K RS NM+AI + + +E ++ L +G FR +L G+PD + +Y+ V Sbjct: 1 MSDIMTKQQRSNNMKAIKSV-SKLESIVSKKLWARGFRFRRNTQNLFGKPDISIKKYKIV 59 Query: 61 IFTHGCFWHHHHCYLF-KVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 IF CFW H C L +P + T++W +K+ +N ERD+ + + GW + +WE + Sbjct: 60 IFIDSCFW--HQCPLHANMPKSHTDYWEKKLERNKERDQEVNNYYSDKGWYLKRIWEHEI 117 Query: 120 RG 121 + Sbjct: 118 KN 119 >UniRef50_Q12VT6 DNA mismatch (G:T) repair endonuclease n=1 Tax=Methanococcoides burtonii DSM 6242 RepID=Q12VT6_METBU Length = 150 Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 1/120 (0%) Query: 2 ADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGL-AFRVQDASLPGRPDFVVDEYRCV 60 A + S+ M A +DT E L L G+ +R+ +PGRPD + Sbjct: 12 APIPKSKITSRVMSANVGKDTKPELLLRKALRYIGIPGYRLHWKKVPGRPDITYPGGKIA 71 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 IF +GC+WH +P + T+FW EK +N ERD +I L+ GW+++++WEC ++ Sbjct: 72 IFVNGCYWHRCPYCNLPLPKSHTDFWAEKFKRNKERDDENIRLLKAEGWKIIVLWECEIK 131 >UniRef50_A4L312 V.TspMI n=2 Tax=Thermus RepID=A4L312_9DEIN Length = 138 Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 47/120 (39%), Positives = 65/120 (54%), Gaps = 5/120 (4%) Query: 3 DVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGL-AFRVQDASLPGRPDFVVDEYRCVI 61 D+ RS+ MR + T T E +L LL G+ +R+++ +LPGRPD V + + I Sbjct: 2 DIFTPEKRSELMRKVKTSSTGPEVKLRRLLRVAGIRGYRIKN-NLPGRPDVVFPKRKVAI 60 Query: 62 FTHGCFWHHHHCYL-FKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 F GCFWH C + K P T EFW KI +N +RD R L GW V+ +WE L+ Sbjct: 61 FVDGCFWHG--CPVCNKKPKTNAEFWRRKIKENRQRDARVDELLARQGWSVVRIWEHELK 118 >UniRef50_C4ZAA5 Very short patch repair endonuclease, putative n=6 Tax=Clostridiales RepID=C4ZAA5_EUBR3 Length = 155 Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 49/133 (36%), Positives = 67/133 (50%), Gaps = 6/133 (4%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 MADV K R KNM+ I +DT IE L L +G +R LPG PD V+ +Y+ Sbjct: 12 MADVLTKEQRHKNMKNIHGKDTKIEIILRKALWAKGYRYRKNYKKLPGNPDIVLTKYKIA 71 Query: 61 IFTHGCFWHHHHCYLFKV---PATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWEC 117 IF G F+H + K + + FW+ KI KN ERD +L +GW V+ W Sbjct: 72 IFCDGEFFHGKDWEVLKPRLQKSNNSAFWVNKISKNRERDDMVNKKLLFMGWTVIRFWGK 131 Query: 118 ALRGREKLTDEAL 130 ++ K TDE + Sbjct: 132 DIK---KHTDECV 141 >UniRef50_C6D8V0 DNA mismatch endonuclease Vsr n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8V0_PAESJ Length = 147 Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 39/121 (32%), Positives = 65/121 (53%), Gaps = 5/121 (4%) Query: 3 DVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIF 62 D++ +S M + +++T +E+ ++ L +G FR SL GRPD V +Y+ VIF Sbjct: 2 DINKTNLKSNFMGRVKSKNTKLEQSVSKALWRKGFRFRKNVLSLYGRPDIAVKKYKLVIF 61 Query: 63 THGCFWH--HHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 CFWH H FK+P+ +++W+ KI +N ERD + W ++ +WE L+ Sbjct: 62 IDSCFWHGCERH---FKLPSKNSDYWMNKISRNRERDLEVTQYYVDNNWILIRIWEHDLK 118 Query: 121 G 121 Sbjct: 119 A 119 >UniRef50_C8WJH8 DNA mismatch endonuclease Vsr n=2 Tax=Coriobacteriaceae RepID=C8WJH8_EGGLE Length = 190 Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 43/112 (38%), Positives = 63/112 (56%), Gaps = 8/112 (7%) Query: 13 NMRAIATRDTAIEKRL-ASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHH- 70 N R+ + + +RL A+ LTG L ++V PG PD R +F +GCFWH Sbjct: 61 NKRSNTKPELLVRERLRAAGLTGYRLQWKV-----PGHPDVAWPGKRVALFVNGCFWHRC 115 Query: 71 HHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGR 122 HC +P + E+W+ K +NVERD R + L+ELGW V ++WEC L+ + Sbjct: 116 PHCKP-SMPKSNVEYWVVKFERNVERDERSRAALEELGWTVHVIWECQLKKK 166 >UniRef50_A4E909 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E909_9ACTN Length = 248 Score = 78.6 bits (192), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 48/130 (36%), Positives = 66/130 (50%), Gaps = 7/130 (5%) Query: 7 KATRSKNMRAIATRDTAIEKRL-ASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHG 65 K + N RA + + +RL A+ LTG L ++V PG+PD + IF +G Sbjct: 117 KKSMKGNKRANTKPELLVRQRLRAAGLTGYRLEWKV-----PGKPDIAFPGRKIAIFVNG 171 Query: 66 CFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL-RGREK 124 CFWH P EFW K +NVERDR I+ L ++GW + VWEC L + R Sbjct: 172 CFWHRCPKCNPSQPKRNVEFWEAKFRRNVERDRAAINALTQMGWTPITVWECELKKDRID 231 Query: 125 LTDEALTERL 134 T E + ER+ Sbjct: 232 ATMEKVIERV 241 >UniRef50_Q20YF6 DNA mismatch endonuclease vsr n=1 Tax=Rhodopseudomonas palustris BisB18 RepID=Q20YF6_RHOPB Length = 105 Score = 78.2 bits (191), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 35/97 (36%), Positives = 53/97 (54%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M D A RS+ M A+ ++T E + L G FR+ ++LPG PD ++ YR Sbjct: 1 MTDNVSPAVRSRIMAAVNNKNTKPEIAVRRALHAAGYRFRLHRSNLPGHPDLILPGYRTE 60 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERD 97 IF HGC+WH H C ++P++ +F KI + + RD Sbjct: 61 IFVHGCYWHGHSCRRRRLPSSNVQFLEAKISRTIGRD 97 >UniRef50_C7DGF8 DNA mismatch endonuclease Vsr n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DGF8_9EURY Length = 133 Score = 78.2 bits (191), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 43/117 (36%), Positives = 62/117 (52%), Gaps = 5/117 (4%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M D + RS NM I +R+T E +L L + L F Q + G+PDF + + Sbjct: 1 MTDFLTNSQRSFNMSKIRSRNTVPELKLRRAL--RKLGFIYQPKHIFGKPDFANKKSKIA 58 Query: 61 IFTHGCFWHHHHC-YLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWE 116 +F GCFWH C Y + P T + FW +KI KN+ RDR+ L++ G++V WE Sbjct: 59 VFIDGCFWHG--CPYHYITPKTNSAFWSQKIKKNIARDRKVGKTLKKEGYKVFRYWE 113 >UniRef50_D0L6H5 DNA mismatch endonuclease Vsr n=1 Tax=Gordonia bronchialis DSM 43247 RepID=D0L6H5_GORB4 Length = 144 Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 47/119 (39%), Positives = 65/119 (54%), Gaps = 9/119 (7%) Query: 4 VHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQ-----DASLPGRPDFVVDEYR 58 V ATRS+NM A+ +T+ E+ + S+L +G +R D L RPD V + R Sbjct: 11 VAPSATRSRNMAAVRRSETSPERAIRSVLHCRGFRYRKDYPIRVDGRL-IRPDIVFTKKR 69 Query: 59 CVIFTHGCFWHHHHCYLF-KVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWE 116 +F GCFWH C L ++PAT T+FW K+ +N ERD L+ GW V+ VWE Sbjct: 70 VAVFVDGCFWHL--CPLHGQIPATNTDFWRRKLERNAERDLEQTRALEGSGWTVVRVWE 126 >UniRef50_A3U5P6 DNA mismatch endonuclease Vsr, putative n=1 Tax=Croceibacter atlanticus HTCC2559 RepID=A3U5P6_9FLAO Length = 163 Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 45/144 (31%), Positives = 68/144 (47%), Gaps = 5/144 (3%) Query: 14 MRAIATRDTAIEKRLASLLTGQGL-AFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHH 72 MR ++ T E L L GL +R+ L G PD V + IF +GCFWH Sbjct: 14 MRGNKSKHTKPELLLRKALWASGLRGYRLHFKKLAGSPDIVFSTKKIAIFVNGCFWHRCP 73 Query: 73 CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTE 132 +P T TEFW +K N++RD+ + L W VL +WEC + ++ L ++ L Sbjct: 74 KCNLNLPKTNTEFWKDKFDTNMKRDQNNYVTLIRSNWTVLTIWECDI--KKNLKEQVL-- 129 Query: 133 RLEEWICGEGASAQIDTQGIHLLA 156 ++E I A + + + L A Sbjct: 130 KIESLIKDVNAYSITTNEPLQLAA 153 >UniRef50_A4SC96 DNA mismatch endonuclease n=1 Tax=Chlorobium phaeovibrioides DSM 265 RepID=A4SC96_PROVI Length = 102 Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 34/93 (36%), Positives = 55/93 (59%), Gaps = 1/93 (1%) Query: 37 LAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHHCYLFK-VPATRTEFWLEKIGKNVE 95 + +R+ L GRPD V + IF +GCFWH H+C + +P + T +WL+K+ +N Sbjct: 1 MGYRLHRKDLLGRPDIVWIGKKAAIFVNGCFWHWHNCGKGRRIPDSNTGYWLDKLKQNRL 60 Query: 96 RDRRDISRLQELGWRVLIVWECALRGREKLTDE 128 D ++I L LGW+V I+WEC L + + ++ Sbjct: 61 CDAQNIKALTGLGWKVAIIWECELANKSYIEEK 93 >UniRef50_B0TCI0 DNA mismatch endonuclease vsr, putative n=5 Tax=Clostridiales RepID=B0TCI0_HELMI Length = 153 Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 39/108 (36%), Positives = 59/108 (54%), Gaps = 3/108 (2%) Query: 10 RSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWH 69 R NM I +++T IE L +G+ +R LPG+PD + +Y+ IF G FWH Sbjct: 10 RHYNMSRIRSKNTRIETVFRKALWREGINYRKNYQLLPGKPDIAITKYKIAIFCDGEFWH 69 Query: 70 HHHCYLFKVPATRT--EFWLEKIGKNVERDRRDISRLQELGWRVLIVW 115 + K P + ++W++KI KN+ERD +L+ +GWRVL W Sbjct: 70 GKD-WEIKKPKIKNNRDYWIQKIEKNMERDIEIDQQLKSMGWRVLRFW 116 >UniRef50_UPI0001B4F16E very short patch repair protein n=1 Tax=Streptomyces griseoflavus Tu4000 RepID=UPI0001B4F16E Length = 150 Score = 75.5 bits (184), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 43/101 (42%), Positives = 53/101 (52%), Gaps = 4/101 (3%) Query: 19 TRDTAIEKRLASLLTGQGLAFRVQDASLPG---RPDFVVDEYRCVIFTHGCFWHHHHCYL 75 RDTA E L SL+ GL +RV LP D V + +F GCFWH + Sbjct: 6 NRDTAPELLLRSLVHAAGLRYRVAAKPLPKMRRTADMVFRPVKVAVFIDGCFWHGCPEH- 64 Query: 76 FKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWE 116 F +P T +W +KIG+NV+RDR RL E GW VL WE Sbjct: 65 FVMPKTNRPYWEDKIGRNVQRDRDTDDRLSEAGWLVLRFWE 105 >UniRef50_C9N7G6 DNA mismatch endonuclease Vsr n=5 Tax=Actinomycetales RepID=C9N7G6_9ACTO Length = 170 Score = 74.7 bits (182), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 44/112 (39%), Positives = 58/112 (51%), Gaps = 4/112 (3%) Query: 8 ATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPG---RPDFVVDEYRCVIFTH 64 A ++M +RDTA E L SL+ GL +RV LP D V + +F Sbjct: 31 AANRRSMLGNRSRDTAPELLLRSLVHAAGLRYRVAAKPLPKMRRTADMVFRPAKVAVFID 90 Query: 65 GCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWE 116 GCFWH + F +P T +W +KIG+NV+RDR RL + GW VL WE Sbjct: 91 GCFWHGCPDH-FVMPKTNRPYWEDKIGRNVQRDRDTDQRLADEGWLVLRFWE 141 >UniRef50_C8VVT5 DNA mismatch endonuclease Vsr n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VVT5_DESAS Length = 150 Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 6/122 (4%) Query: 6 DKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHG 65 D K M ++ ++DT E L L G GL +R+ +PG+PD V + R +F G Sbjct: 4 DPQITHKIMSSVKSKDTRPEIALRKALWGMGLRYRINYKQIPGKPDVVFTKARIAVFCDG 63 Query: 66 CFWHHHHCYLFKVPAT------RTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 +WH H+ + + + +EFW KI N+ RD + L +GW V+ VWE + Sbjct: 64 DYWHGHNWAIRGLKSLDEELSHYSEFWSNKIRGNINRDETVNNELTNMGWHVIRVWESDI 123 Query: 120 RG 121 + Sbjct: 124 KA 125 >UniRef50_D1WVX3 DNA mismatch endonuclease Vsr n=1 Tax=Streptomyces sp. ACT-1 RepID=D1WVX3_9ACTO Length = 272 Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 55/142 (38%), Positives = 64/142 (45%), Gaps = 13/142 (9%) Query: 14 MRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPG---RPDFVVDEYRCVIFTHGCFWHH 70 MRA +DT E L LL GL +RV +P R D V R +F GCFWH Sbjct: 134 MRANRRKDTGPELALRRLLHASGLRYRVDARPVPEVRRRADLVFPGARVAVFVDGCFWHG 193 Query: 71 HHCYLFKVPATRT-EFWLEKIGKNVERDRRDISRLQELGWRVLIVW--ECALRGREKLTD 127 C PATR EFW EKI N RDR L+ GW V+ VW E E ++ Sbjct: 194 --CPEHYRPATRNAEFWREKIEGNRNRDRETNETLRAAGWSVVRVWEHEAPETAAELVSR 251 Query: 128 EALTERLEEWICGEGASAQIDT 149 E +RL G G SA T Sbjct: 252 EVRAQRL-----GTGPSASFAT 268 >UniRef50_UPI00016A6F51 putative very short patch repair protein n=2 Tax=pseudomallei group RepID=UPI00016A6F51 Length = 148 Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 41/109 (37%), Positives = 56/109 (51%), Gaps = 4/109 (3%) Query: 11 SKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPG---RPDFVVDEYRCVIFTHGCF 67 S+ M +D E+ L S L QG+ FR+ A++PG D R +F GCF Sbjct: 9 SRRMARTVGKDNPRERALRSALHRQGIRFRIHYAAIPGTRRSIDIAFTRLRLAVFCDGCF 68 Query: 68 WHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWE 116 WH + +P TR E+W+EKI N RDR +RL GW V+ +WE Sbjct: 69 WHGCPAHA-TIPKTRREWWVEKIMANKIRDRDTDARLINSGWTVMRIWE 116 >UniRef50_UPI0001968FCC hypothetical protein BACCELL_03936 n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=UPI0001968FCC Length = 150 Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 42/116 (36%), Positives = 59/116 (50%), Gaps = 3/116 (2%) Query: 7 KATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGC 66 K RSKNM+AI + T E LA L GL +R D S+ G+PD Y+ IF Sbjct: 6 KEQRSKNMQAIKNKGTKDEVLLAKKLWHIGLRYRKNDNSVFGKPDLTFKRYKIAIFIDSE 65 Query: 67 FWHHH--HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 F+H +K+ + R EFW KI +N+ RD L+ GW+V+ W ++R Sbjct: 66 FFHGKDWETEKYKIKSNR-EFWWPKIERNITRDITVNQVLENAGWKVIRFWSKSMR 120 >UniRef50_C0ABV7 DNA G:T-mismatch repair endonuclease n=2 Tax=Verrucomicrobia RepID=C0ABV7_9BACT Length = 142 Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 48/128 (37%), Positives = 63/128 (49%), Gaps = 13/128 (10%) Query: 1 MADVHDKATRSKNM---RAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDE- 56 M+DV KA RS M R +DT E RL ++ G+ + ++ G+PDFV + Sbjct: 1 MSDVFTKAKRSAVMARIRGSGNKDT--ELRLIAIFRENGITGWRRKQTVLGKPDFVFRKP 58 Query: 57 ----YRCVIFTHGCFWHHHHCYLFKV-PATRTEFWLEKIGKNVERDRRDISRLQELGWRV 111 R +F GCFWH C L P EFWL KI +N RD+ L+ GWRV Sbjct: 59 HSGMKRLAVFVDGCFWHG--CPLHGTQPKNNAEFWLAKIARNQTRDQLVTRTLRARGWRV 116 Query: 112 LIVWECAL 119 L +WE L Sbjct: 117 LRIWEHEL 124 >UniRef50_A1SJ03 T/G mismatch-specific endonuclease n=1 Tax=Nocardioides sp. JS614 RepID=A1SJ03_NOCSJ Length = 153 Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 43/124 (34%), Positives = 63/124 (50%), Gaps = 10/124 (8%) Query: 5 HDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTH 64 D A S+ M A+ +DT E L + +G +R+ +PGRPD VV + IF Sbjct: 12 RDPAVTSRIMSAVRAKDTKPELLLRRAVHARGGRYRLHAPDVPGRPDLVVRGKKIAIFVD 71 Query: 65 GCFWHHHHCY--------LFKVPATRTEFWLEKIGKNVERDRRDISR-LQELGWRVLIVW 115 G WH + L + TRT++W++KI +NV RD +D+ R L GWRVL +W Sbjct: 72 GDLWHGNPAEWRRRGKDDLAGLFPTRTQWWVDKIERNVRRD-QDVDRELAARGWRVLRLW 130 Query: 116 ECAL 119 + Sbjct: 131 ASDI 134 >UniRef50_A0RY33 DNA G/T mismatch repair endonuclease n=1 Tax=Cenarchaeum symbiosum RepID=A0RY33_CENSY Length = 157 Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 42/136 (30%), Positives = 62/136 (45%), Gaps = 3/136 (2%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M DV RS M I ++ T I+ ++ +LT G+ F + +PG PDF Sbjct: 1 MTDVFTPEKRSWVMSRIRSKGTGIDIKMKEILTHTGIKFEMY-PQIPGNPDFASRRLGIT 59 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 +F G FWH + K+P + +FW KI N+ERD L+ GW VL WE + Sbjct: 60 VFCDGDFWHGYDYRRGKIP--KKQFWRNKIECNMERDLYVSGMLRSNGWSVLRFWEHDID 117 Query: 121 GREKLTDEALTERLEE 136 G + ++ E Sbjct: 118 GNPDKCSGKIQRKIRE 133 >UniRef50_UPI0001B50D9E putative DNA mismatch endonuclease n=1 Tax=Streptomyces viridochromogenes DSM 40736 RepID=UPI0001B50D9E Length = 154 Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 43/114 (37%), Positives = 55/114 (48%), Gaps = 11/114 (9%) Query: 10 RSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQ-----DASLPGRPDFVVDEYRCVIFTH 64 RS+NM AI RDT E+ + SLL G +RV + + P RPD R +F Sbjct: 17 RSRNMAAIKRRDTKPERTIRSLLHAAGKRYRVDYRLQLEGARP-RPDIAFTRARVAVFVD 75 Query: 65 GCFWH--HHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWE 116 GCFWH H + P +W K+ +NV RDR L GW V+ VWE Sbjct: 76 GCFWHCCPEHG---RQPGVNGGYWGPKLERNVARDRAADEALAAAGWSVVRVWE 126 >UniRef50_D0LEE5 DNA mismatch endonuclease Vsr n=2 Tax=Actinomycetales RepID=D0LEE5_GORB4 Length = 155 Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 45/109 (41%), Positives = 52/109 (47%), Gaps = 7/109 (6%) Query: 13 NMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLP----GRPDFVVDEYRCVIFTHGCFW 68 +MR RDT E + LL GL +RV A LP R D V R +F GC+W Sbjct: 17 SMRGNRRRDTRPELEVRRLLHAMGLRYRVDLAPLPESRRNRADIVFIRARVAVFIDGCYW 76 Query: 69 HHHHCYLFKVPATRT-EFWLEKIGKNVERDRRDISRLQELGWRVLIVWE 116 H C PA R FW KI N ERDRR + L+ GW VL WE Sbjct: 77 HK--CPDHYRPARRNANFWSAKIEGNRERDRRVTAMLEGAGWTVLRFWE 123 >UniRef50_Q04A40 T/G mismatch-specific endonuclease n=3 Tax=Bacteria RepID=Q04A40_LACDB Length = 140 Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 60/107 (56%), Gaps = 3/107 (2%) Query: 11 SKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHH 70 SK M + + + E + +L G+ +R LPG+PD + +Y+ +F G FWH Sbjct: 12 SKRMSKVHSTEGKDEVIIRKILWKNGIHYRKNYKDLPGKPDIALTKYKVAVFIDGEFWHG 71 Query: 71 HHCYLFK--VPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVW 115 + +K + + R ++W+ KI +N++RD+ ++L+E+GW VL W Sbjct: 72 YDWENYKKHIESNR-DYWIPKIERNMKRDQEVNAKLKEMGWTVLRFW 117 >UniRef50_A1UB42 DNA mismatch endonuclease vsr n=4 Tax=Actinomycetales RepID=A1UB42_MYCSK Length = 133 Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 41/112 (36%), Positives = 54/112 (48%), Gaps = 10/112 (8%) Query: 11 SKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGR---PDFVVDEYRCVIFTHGCF 67 S+ M A +++T IE RL S L +GL +R+ LP D V + ++ GCF Sbjct: 2 SRRMSAQLSQNTGIEMRLRSALHARGLRYRLHQRPLPQHRRTADIVFRRAKVAVYVDGCF 61 Query: 68 WH---HHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWE 116 WH H + P EFW KI NV RDR + L E GW + VWE Sbjct: 62 WHGCPEHATW----PKRNAEFWRNKIEANVRRDRETDTSLIEAGWTPVRVWE 109 >UniRef50_UPI0001BCE75A DNA mismatch endonuclease Vsr n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCE75A Length = 123 Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 45/123 (36%), Positives = 59/123 (47%), Gaps = 6/123 (4%) Query: 14 MRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHH--H 71 MR + +DT E L L +G+ +R +LPG PD V+ + IF G FWH H Sbjct: 1 MRRVRAKDTKPEIALRKGLWKRGVRYRKNVRALPGTPDIVLAGRKIAIFVDGDFWHARGH 60 Query: 72 HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVW----ECALRGREKLTD 127 + A+ FW K+ +NVERDR L E+GW VL W E L G + D Sbjct: 61 RENPGEEVASNQSFWRAKLARNVERDREVNDSLTEMGWLVLRFWTSDIEKDLAGVLAVID 120 Query: 128 EAL 130 E L Sbjct: 121 EYL 123 >UniRef50_A4X2E7 DNA mismatch endonuclease vsr n=2 Tax=Actinomycetales RepID=A4X2E7_SALTO Length = 177 Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 43/116 (37%), Positives = 55/116 (47%), Gaps = 6/116 (5%) Query: 9 TRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPG-RPDFVVDEYRCVIFTHGCF 67 T ++R TRDTA E L + GL +R+ RPD R +F GCF Sbjct: 24 TEGSHLRGRRTRDTAPEVALRRAVHALGLRYRLGRTLFNRCRPDLAFPGPRVAVFVDGCF 83 Query: 68 WH---HHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 WH H F+ P + W KI N +RD+R L E GWRV+ VWEC +R Sbjct: 84 WHGCPQHGPSRFRGP--NADRWAAKIETNRQRDQRVDKELVEAGWRVVRVWECEVR 137 >UniRef50_D1A867 DNA mismatch endonuclease Vsr n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1A867_THECD Length = 167 Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 44/114 (38%), Positives = 56/114 (49%), Gaps = 10/114 (8%) Query: 10 RSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQ-DASLPG----RPDFVVDEYRCVIFTH 64 RS+NMRA +T E L S L G +R LPG RPD V + IF Sbjct: 27 RSRNMRANRRSNTKPEVALRSALHALGYRYRKDYRLDLPGGFRVRPDIVFTARKVAIFVD 86 Query: 65 GCFWH--HHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWE 116 GCFWH H + P T +W K+ +NVERDR L+ GW+V+ +WE Sbjct: 87 GCFWHVCPEHG---RQPTTNEWYWAPKLRRNVERDRLANRALEAAGWKVVRLWE 137 >UniRef50_A4ANX8 Putative very-short-patch-repair endonuclease n=1 Tax=Flavobacteriales bacterium HTCC2170 RepID=A4ANX8_9FLAO Length = 160 Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 43/125 (34%), Positives = 64/125 (51%), Gaps = 6/125 (4%) Query: 10 RSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWH 69 RSK M I ++T E L G +RV L GRPD V+++Y+ V+F G FWH Sbjct: 27 RSKIMSKIRGKNTKPELAFRKALWAIGYRYRVDSRKLIGRPDIVLNKYKTVVFIDGEFWH 86 Query: 70 HHHC--YLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTD 127 H+ K+ + R +FW+ KI +N +RD L + G++V WE ++ K D Sbjct: 87 GHNWEERKHKIKSNR-DFWIAKIERNQQRDAEVNLALGQQGYKVFRFWEHQIK---KELD 142 Query: 128 EALTE 132 E L + Sbjct: 143 ECLQK 147 >UniRef50_C7V3C2 Putative uncharacterized protein n=1 Tax=Enterococcus faecalis T11 RepID=C7V3C2_ENTFA Length = 145 Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 2/112 (1%) Query: 7 KATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGC 66 K RSK M I + E LA + +G + LPG+PD + +Y+ IF G Sbjct: 5 KEYRSKMMSKIRSTGGKAETLLAKRIWHEGYRYFRNYKKLPGKPDIAITKYKIAIFVDGE 64 Query: 67 FWHHH--HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWE 116 FWH + K T ++W+ KI KN+ +D++ L+ +GW V+ WE Sbjct: 65 FWHGYDWDNQKLKRIHTNRDYWIPKIEKNMAKDKQVNEELRNMGWIVIRFWE 116 >UniRef50_C7XVZ3 Short-patch-repair endonuclease n=1 Tax=Lactobacillus coleohominis 101-4-CHN RepID=C7XVZ3_9LACO Length = 142 Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 3/110 (2%) Query: 10 RSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWH 69 RSK M I + E L + +G+ + LPG+PD + +Y+ +F G +WH Sbjct: 7 RSKMMSKIRSTGGKAETILGKAIWHKGIRYFRNYKKLPGKPDLAITKYKIAVFVDGEYWH 66 Query: 70 HHHCYLFKVPA---TRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWE 116 ++ K ++WL+KI N+E DR+ L+++GW V+ WE Sbjct: 67 GYNYDEIKSGKRVHRNRQYWLKKINYNMEHDRKVNDELKKMGWTVIRFWE 116 >UniRef50_A1K2B8 Putative hypothetical very short patch repair endonuclease n=1 Tax=Azoarcus sp. BH72 RepID=A1K2B8_AZOSB Length = 129 Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 39/105 (37%), Positives = 50/105 (47%), Gaps = 5/105 (4%) Query: 14 MRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWH--HH 71 M I RDT E L + GL +R+Q RPD V R +F GCFWH Sbjct: 2 MSRIKGRDTGPELSLRRNIWALGLRYRLQYRIGRTRPDMVFVRARLAVFVDGCFWHGCPQ 61 Query: 72 HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWE 116 H + P +FW K+ +N ERD + L+ GWRVL +WE Sbjct: 62 HSTM---PKNNRDFWERKLRRNRERDAENTHSLEAEGWRVLRLWE 103 >UniRef50_A6BKR1 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BKR1_9FIRM Length = 153 Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 39/111 (35%), Positives = 54/111 (48%), Gaps = 2/111 (1%) Query: 6 DKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHG 65 D+AT SK M + + E LA L +G +++ D +LPG PD + Y IF G Sbjct: 10 DEAT-SKRMSNVKLKKGTAEMLLAKELWHKGFRYQLNDKTLPGSPDIAIRRYNIAIFVDG 68 Query: 66 CFWHHHHCYLFKVPATRT-EFWLEKIGKNVERDRRDISRLQELGWRVLIVW 115 FWH + K R E+W+EKI +N+ RD R L GW + W Sbjct: 69 EFWHGYDWDNKKPKLKRNREYWIEKIEENMARDTRVDKELLVKGWVPIHFW 119 >UniRef50_A5CSG2 Putative patch repair endonuclease n=1 Tax=Clavibacter michiganensis subsp. michiganensis NCPPB 382 RepID=A5CSG2_CLAM3 Length = 154 Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 39/113 (34%), Positives = 56/113 (49%), Gaps = 8/113 (7%) Query: 9 TRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLP---GRPDFVVDEYRCVIFTHG 65 T + MR+ RDTA E + +L +G+ +RV + R D R +F G Sbjct: 8 TSRRVMRSNMRRDTAPELAVRRILHAKGMRYRVDFRVVRETRSRADIAFTRQRIAVFIDG 67 Query: 66 CFWHH--HHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWE 116 CFWH H +L P ++W+ K+ +NVERD + L+ LGW VL WE Sbjct: 68 CFWHSCPEHLHL---PKANADYWIPKLARNVERDAEVAAVLRGLGWTVLRFWE 117 >UniRef50_D1PRX0 Short patch repair protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRX0_9FIRM Length = 115 Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 29/71 (40%), Positives = 42/71 (59%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 MAD H K RS NM I + ++ E+ + L +G +R +LPG PD V+ +Y+ V Sbjct: 35 MADNHTKEIRSINMSHIRSTNSKPEEIVRKYLFSKGFRYRKNVRTLPGCPDIVLPKYKTV 94 Query: 61 IFTHGCFWHHH 71 IF +GCFWH + Sbjct: 95 IFVNGCFWHAY 105 >UniRef50_A1T424 DNA mismatch endonuclease vsr n=12 Tax=Actinomycetales RepID=A1T424_MYCVP Length = 164 Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 50/106 (47%), Gaps = 3/106 (2%) Query: 14 MRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPG---RPDFVVDEYRCVIFTHGCFWHH 70 M+ TRDT E L LL +GL +RV LP R D V + +F GCFWH Sbjct: 33 MQRQRTRDTEPELALRRLLHARGLRYRVDAQPLPSLRRRADLVFGPAKIAVFVDGCFWHG 92 Query: 71 HHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWE 116 + ++ +W +K+ +N RD + L E GW + VWE Sbjct: 93 CPKHGQRITHANPTYWTDKVARNNRRDVETDAALNEAGWLSIRVWE 138 >UniRef50_P50186 NaeI very short patch repair endonuclease n=2 Tax=Actinomycetales RepID=VSN1_NOCAE Length = 166 Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 42/117 (35%), Positives = 53/117 (45%), Gaps = 10/117 (8%) Query: 7 KATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQ-----DASLPGRPDFVVDEYRCVI 61 A RS+NM+A T E L S L G +R + +PD V + + Sbjct: 25 NAGRSRNMQANRRSGTKPEAALRSALFKLGYRYRKDFLLRLGDGVKVKPDIVFTARKVAV 84 Query: 62 FTHGCFWH--HHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWE 116 F GCFWH H + P T +W K+ +NVERDR L GWRVL VWE Sbjct: 85 FIDGCFWHVCPDHG---RQPTTNEWYWSPKLRRNVERDRTVNQSLTNAGWRVLRVWE 138 >UniRef50_Q2SAF1 DNA G:T-mismatch repair endonuclease n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SAF1_HAHCH Length = 140 Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 37/115 (32%), Positives = 55/115 (47%), Gaps = 2/115 (1%) Query: 2 ADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVI 61 DV R M I ++T E L L GL +R+Q + GRPD + + + Sbjct: 5 TDVLTPEQRKLCMSKIRGKNTKPELLLRKALWSIGLRYRLQ-GKITGRPDLIFSGPKVAV 63 Query: 62 FTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWE 116 F GCFWH + ++ P FW EK+ +N+ RD+ L + GW V+ +WE Sbjct: 64 FVDGCFWHGCPEH-YRTPQNNQAFWKEKLRRNMCRDKAVNRILVDNGWLVVRLWE 117 >UniRef50_D1S9Q4 DNA mismatch endonuclease Vsr n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1S9Q4_9ACTO Length = 165 Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 39/106 (36%), Positives = 50/106 (47%), Gaps = 3/106 (2%) Query: 14 MRAIATRDTAIEKRLASLLTGQGLAFRVQDA---SLPGRPDFVVDEYRCVIFTHGCFWHH 70 M+ TRDT E + LL GL +RV A SL R D V R +F GCFWH Sbjct: 34 MQRQRTRDTQPELAIRRLLHAAGLRYRVDVAPTRSLRRRADIVFGPARVAVFVDGCFWHG 93 Query: 71 HHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWE 116 + + T T++W K+ +N RD L GW V+ VWE Sbjct: 94 CPQHGSRKTKTNTDYWSGKVARNQARDTATDGLLTNDGWLVIRVWE 139 >UniRef50_D0LCF9 DNA mismatch endonuclease Vsr n=1 Tax=Gordonia bronchialis DSM 43247 RepID=D0LCF9_GORB4 Length = 161 Score = 61.2 bits (147), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 39/116 (33%), Positives = 57/116 (49%), Gaps = 10/116 (8%) Query: 4 VHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQ---DASLPGRPDFVVDEYRCV 60 V + +R +N +DTA E ++ +L +G FR ++ L R D R Sbjct: 21 VRSRMSRQRN------KDTAPEVQVRKILHARGARFRTDVKLESDLRTRADLAWRGLRLA 74 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWE 116 +F GCFWH + + PA+ E+W EK+ NV RDRR + L + GW V WE Sbjct: 75 VFIDGCFWHGCPEHATR-PASNAEWWAEKLDANVARDRRTDALLADRGWTVRRYWE 129 >UniRef50_P36434 HpaII very short patch repair endonuclease n=1 Tax=Haemophilus parainfluenzae RepID=VSH2_HAEPA Length = 141 Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 61/130 (46%), Gaps = 6/130 (4%) Query: 10 RSKNMRAIA-TRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFW 68 R K M+A + + T E LA L GL +R D S+ G PD Y+ IF G FW Sbjct: 9 RKKCMKASSKNKGTKPELLLAKYLWALGLRYRKNDRSIFGTPDLSFKRYKIAIFIDGEFW 68 Query: 69 HHHHCYLFKVP-ATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVW-ECALRGREKLT 126 H + K + +FW+ KI N+ RD++ L GW + W + L+ EK + Sbjct: 69 HGKDWDIRKYDIKSNKDFWISKIEHNMNRDKKVNDYLISNGWVIFRFWGKDVLKNPEKFS 128 Query: 127 DE---ALTER 133 E A+ ER Sbjct: 129 LEIQKAIYER 138 >UniRef50_A3TJK1 Putative DNA mismatch endonuclease n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TJK1_9MICO Length = 140 Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 43/119 (36%), Positives = 51/119 (42%), Gaps = 10/119 (8%) Query: 4 VHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRP----DFVVDEYRC 59 V A S + A T E L L GL FRVQ +PG P D + Sbjct: 6 VPPSARLSARFSSQARDATKPELSLRRELHRHGLRFRVQYL-IPGLPRRRADLAFTRQKV 64 Query: 60 VIFTHGCFWH--HHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWE 116 +F GCFWH HC VP E+WL K N RD +L ELGW V+ +WE Sbjct: 65 AVFVDGCFWHACPLHCV---VPKANREWWLWKFSTNSSRDADTNIKLAELGWTVVRIWE 120 >UniRef50_D2EGA7 DNA mismatch endonuclease Vsr n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EGA7_9EURY Length = 123 Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 33/104 (31%), Positives = 57/104 (54%), Gaps = 2/104 (1%) Query: 14 MRAIATRDTAIEKRLASLLTGQGL-AFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHH 72 M I + DT E +L + G+ +R+ SL G+PD V + + IF G FWH ++ Sbjct: 1 MARIKSIDTTPEIKLRKAIWKLGIRGYRIHLNSLIGKPDLVFTKKKVAIFVDGDFWHGYN 60 Query: 73 CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWE 116 + K + +W +KI +N+ER ++L++ GW+V+ +WE Sbjct: 61 -WKNKGIIPKRGYWQKKITRNIERREVVKAQLKQKGWKVVELWE 103 >UniRef50_B5HK48 Putative uncharacterized protein n=3 Tax=Streptomyces RepID=B5HK48_STRPR Length = 152 Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 38/110 (34%), Positives = 49/110 (44%), Gaps = 6/110 (5%) Query: 11 SKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRP----DFVVDEYRCVIFTHGC 66 S M A RDT E + LL GL +R+Q +PG D R +F GC Sbjct: 14 SARMSRQARRDTDPEMAVRRLLYAAGLRYRLQR-RVPGMARRTIDIAFPGLRIAVFMDGC 72 Query: 67 FWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWE 116 FWH + P +W EK+ KN+ RD L++ GW VL WE Sbjct: 73 FWHGCPQHATS-PKANASWWREKLDKNIARDIETTKHLEDAGWVVLRFWE 121 >UniRef50_A1W7Y7 Putative very short patch repair protein n=3 Tax=Burkholderiales RepID=A1W7Y7_ACISJ Length = 152 Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 40/113 (35%), Positives = 52/113 (46%), Gaps = 12/113 (10%) Query: 11 SKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVD----EYRCVIFTHGC 66 S+ M + + T E L L +GL +R+ D + +P V D R +F GC Sbjct: 12 SRRMAKVRQKGTDAEIALRRELYRRGLRYRI-DYEVLKKPRRVADVAFPGLRIAVFVDGC 70 Query: 67 FWH---HHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWE 116 FWH H + P EFW +KI N RD SRL E+GW VL WE Sbjct: 71 FWHGCPEHATW----PKQNAEFWRQKIETNRLRDADTNSRLLEVGWTVLRFWE 119 >UniRef50_D1SGS2 DNA mismatch endonuclease Vsr n=2 Tax=Actinomycetales RepID=D1SGS2_9ACTO Length = 145 Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 34/111 (30%), Positives = 47/111 (42%), Gaps = 10/111 (9%) Query: 12 KNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPG---RPDFVVDEYRCVIFTHGCFW 68 K+M+A RDT E L + GL + V + D + + +F GCFW Sbjct: 14 KSMQANTGRDTKPELALRRAVHALGLRYYVNRRPIKAVRRTADLLFPRLKLAVFLDGCFW 73 Query: 69 H---HHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWE 116 H HH + T FW +K+ N RD RL GW V+ +WE Sbjct: 74 HGCPEHHT----IAKTNAAFWSQKVATNRRRDVDTNERLTAAGWTVIRIWE 120 >UniRef50_A6WGD4 DNA mismatch endonuclease vsr n=3 Tax=Actinomycetales RepID=A6WGD4_KINRD Length = 152 Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 49/108 (45%), Gaps = 7/108 (6%) Query: 14 MRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPG-----RPDFVVDEYRCVIFTHGCFW 68 MR +DT E L L +GL + V DA+ PG R D V R +F GCFW Sbjct: 22 MRRTGRKDTRPELALRRELHRRGLRYLV-DATPPGTNRRRRADLVFRGARVAVFVDGCFW 80 Query: 69 HHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWE 116 H ++ + P +W K+ RDR + L GW V+ VWE Sbjct: 81 HSCPVHVHR-PKANAGWWRVKLASITARDRDTDAVLAAAGWCVVRVWE 127 >UniRef50_D2SC98 DNA mismatch endonuclease vsr n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2SC98_9ACTO Length = 143 Score = 39.3 bits (90), Expect = 0.035, Method: Compositional matrix adjust. Identities = 19/39 (48%), Positives = 23/39 (58%) Query: 78 VPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWE 116 VP E+WL ++ NV RDRR + L GWRVL WE Sbjct: 83 VPHANREWWLAELAGNVARDRRADAVLGAEGWRVLRFWE 121 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P09184 Very short patch repair protein n=115 Tax=Entero... 227 1e-58 UniRef50_A1BCM5 T/G mismatch-specific endonuclease n=12 Tax=Bact... 213 1e-54 UniRef50_B0KIU4 DNA mismatch endonuclease Vsr n=1 Tax=Pseudomona... 211 6e-54 UniRef50_Q0AK56 T/G mismatch-specific endonuclease n=8 Tax=Prote... 207 8e-53 UniRef50_D0C733 T/G mismatch-specific endonuclease n=1 Tax=Acine... 207 9e-53 UniRef50_Q5QV95 DNA mismatch endonuclease, patch repair protein ... 206 2e-52 UniRef50_B4RGD5 Patch repair protein n=4 Tax=Bacteria RepID=B4RG... 203 1e-51 UniRef50_D1T035 DNA mismatch endonuclease Vsr n=1 Tax=Acidovorax... 203 2e-51 UniRef50_A9GYW9 DNA mismatch endonuclease vsr n=1 Tax=Roseobacte... 202 3e-51 UniRef50_A0LQ21 T/G mismatch-specific endonuclease n=3 Tax=Prote... 200 1e-50 UniRef50_Q21TW8 T/G mismatch-specific endonuclease n=5 Tax=Prote... 199 3e-50 UniRef50_C9L355 XorII very short patch repair endonuclease n=2 T... 198 6e-50 UniRef50_B3EJE0 DNA mismatch endonuclease Vsr n=2 Tax=Bacteria R... 197 1e-49 UniRef50_D1QVC0 Patch repair protein n=1 Tax=Prevotella oris F03... 195 3e-49 UniRef50_C7PIW0 DNA mismatch endonuclease Vsr n=8 Tax=Bacteroide... 195 5e-49 UniRef50_A9H9K5 DNA mismatch endonuclease Vsr n=4 Tax=Proteobact... 194 7e-49 UniRef50_Q5NYW8 Very short patch repair protein (DNA mismatch en... 193 1e-48 UniRef50_B3QE76 DNA mismatch endonuclease Vsr n=1 Tax=Rhodopseud... 193 1e-48 UniRef50_B8F0E1 DNA mismatch endonuclease Vsr n=1 Tax=Thauera sp... 192 3e-48 UniRef50_A1B3R0 T/G mismatch-specific endonuclease n=2 Tax=Rhodo... 190 1e-47 UniRef50_Q1PVJ9 Strongly similar to very short patch repair endo... 190 1e-47 UniRef50_Q3IVR8 T/G mismatch-specific endonuclease n=4 Tax=Bacte... 190 1e-47 UniRef50_A3WFL9 DNA mismatch endonuclease Vsr, putative n=1 Tax=... 190 2e-47 UniRef50_Q5ZW52 Patch repair protein n=2 Tax=Legionella RepID=Q5... 189 2e-47 UniRef50_A3N1K2 Putative DNA mismatch endonuclease n=2 Tax=Actin... 189 2e-47 UniRef50_C7LPG4 DNA mismatch endonuclease Vsr n=1 Tax=Desulfomic... 189 2e-47 UniRef50_Q9JWD6 Putative very short patch repair endonuclease n=... 188 4e-47 UniRef50_A5V0Q2 T/G mismatch-specific endonuclease n=3 Tax=Bacte... 187 7e-47 UniRef50_A3PQ65 T/G mismatch-specific endonuclease n=1 Tax=Rhodo... 187 9e-47 UniRef50_Q5X687 Putative uncharacterized protein n=1 Tax=Legione... 186 1e-46 UniRef50_D1BA88 DNA mismatch endonuclease Vsr n=6 Tax=Bacteria R... 186 1e-46 UniRef50_D2LK67 DNA mismatch endonuclease Vsr n=1 Tax=Rhodomicro... 186 2e-46 UniRef50_UPI000196BAC4 hypothetical protein CATMIT_00200 n=1 Tax... 186 2e-46 UniRef50_Q2S7T9 DNA G:T-mismatch repair endonuclease n=6 Tax=Pro... 186 3e-46 UniRef50_A1S287 T/G mismatch-specific endonuclease n=1 Tax=Shewa... 185 3e-46 UniRef50_Q31CG2 T/G mismatch-specific endonuclease n=5 Tax=Bacte... 185 3e-46 UniRef50_A1U1D0 T/G mismatch-specific endonuclease n=2 Tax=Prote... 185 4e-46 UniRef50_B9E7L5 Putative uncharacterized protein n=1 Tax=Macroco... 185 5e-46 UniRef50_Q56829 XorII very short patch repair endonuclease n=16 ... 185 6e-46 UniRef50_Q28ND8 T/G mismatch-specific endonuclease n=1 Tax=Janna... 184 8e-46 UniRef50_Q64Q05 Putative very-short-patch-repair endonuclease n=... 183 2e-45 UniRef50_C9RP57 DNA mismatch endonuclease Vsr n=1 Tax=Fibrobacte... 183 2e-45 UniRef50_C5B599 DNA mismatch endonuclease vsr n=2 Tax=Methylobac... 182 3e-45 UniRef50_A4G657 Very short patch repair protein (DNA mismatch en... 182 3e-45 UniRef50_B7GPI0 DNA mismatch endonuclease vsr n=12 Tax=cellular ... 181 6e-45 UniRef50_A3U5P6 DNA mismatch endonuclease Vsr, putative n=1 Tax=... 181 6e-45 UniRef50_C7RCX3 DNA mismatch endonuclease Vsr n=1 Tax=Kangiella ... 180 1e-44 UniRef50_B8HDH1 DNA mismatch endonuclease Vsr n=4 Tax=Bacteria R... 179 2e-44 UniRef50_C5APE9 Very-short-patch-repair endonuclease n=1 Tax=Met... 177 1e-43 UniRef50_UPI00016AF703 DNA mismatch endonuclease vsr n=2 Tax=pse... 176 2e-43 UniRef50_C9PU27 Putative uncharacterized protein n=1 Tax=Prevote... 175 3e-43 UniRef50_C9MXV4 Patch repair protein n=2 Tax=Leptotrichia hofsta... 175 5e-43 UniRef50_A2SSP3 T/G mismatch-specific endonuclease n=1 Tax=Metha... 174 8e-43 UniRef50_Q1IIN5 T/G mismatch-specific endonuclease n=1 Tax=Candi... 174 1e-42 UniRef50_A5EB61 T/G mismatch-specific endonuclease n=2 Tax=Brady... 173 2e-42 UniRef50_A1A2S3 Possible XorII very-short-patch-repair endonucle... 173 2e-42 UniRef50_Q027Y0 T/G mismatch-specific endonuclease n=2 Tax=Acido... 173 2e-42 UniRef50_B1J232 DNA mismatch endonuclease Vsr n=7 Tax=Bacteria R... 172 2e-42 UniRef50_B5JQD1 DNA mismatch endonuclease Vsr family n=1 Tax=Ver... 172 3e-42 UniRef50_A3ZZ75 Patch repair protein n=1 Tax=Blastopirellula mar... 172 4e-42 UniRef50_C4ZAA5 Very short patch repair endonuclease, putative n... 171 5e-42 UniRef50_A0LM24 T/G mismatch-specific endonuclease n=1 Tax=Syntr... 170 1e-41 UniRef50_A4ANX8 Putative very-short-patch-repair endonuclease n=... 170 2e-41 UniRef50_C6BBA5 DNA mismatch endonuclease Vsr n=1 Tax=Ralstonia ... 169 2e-41 UniRef50_Q2SAF1 DNA G:T-mismatch repair endonuclease n=1 Tax=Hah... 169 3e-41 UniRef50_Q12VT6 DNA mismatch (G:T) repair endonuclease n=1 Tax=M... 167 1e-40 UniRef50_A4L312 V.TspMI n=2 Tax=Thermus RepID=A4L312_9DEIN 166 2e-40 UniRef50_C7N4R6 T/G mismatch-specific endonuclease n=3 Tax=Corio... 166 2e-40 UniRef50_A9ADY1 DNA mismatch endonuclease Vsr n=2 Tax=Burkholder... 165 3e-40 UniRef50_D2BGG7 Vsr domain protein T:G mismatch repair endonucle... 165 3e-40 UniRef50_C4FAH6 Putative uncharacterized protein n=1 Tax=Collins... 164 8e-40 UniRef50_C4RRL0 XorII-short-patch-repair endonuclease n=1 Tax=Mi... 164 8e-40 UniRef50_C9S232 DNA mismatch endonuclease Vsr n=2 Tax=Geobacillu... 163 1e-39 UniRef50_Q8EL90 Very-short-patch-repair endonuclease n=3 Tax=Bac... 161 4e-39 UniRef50_A4E909 Putative uncharacterized protein n=1 Tax=Collins... 161 8e-39 UniRef50_C7DGF8 DNA mismatch endonuclease Vsr n=1 Tax=Candidatus... 158 4e-38 UniRef50_A6E296 Very short patch repair protein (DNA mismatch en... 158 5e-38 UniRef50_D1A867 DNA mismatch endonuclease Vsr n=1 Tax=Thermomono... 158 7e-38 UniRef50_C8WJH8 DNA mismatch endonuclease Vsr n=2 Tax=Coriobacte... 157 8e-38 UniRef50_C8VVT5 DNA mismatch endonuclease Vsr n=1 Tax=Desulfotom... 157 1e-37 UniRef50_Q1D6D6 Very short patch repair protein n=1 Tax=Myxococc... 157 1e-37 UniRef50_B0TCI0 DNA mismatch endonuclease vsr, putative n=5 Tax=... 156 2e-37 UniRef50_UPI0001968FCC hypothetical protein BACCELL_03936 n=1 Ta... 156 2e-37 UniRef50_A1K2B8 Putative hypothetical very short patch repair en... 156 3e-37 UniRef50_D1WVX3 DNA mismatch endonuclease Vsr n=1 Tax=Streptomyc... 155 3e-37 UniRef50_C0EI85 Putative uncharacterized protein n=2 Tax=Clostri... 155 4e-37 UniRef50_P50186 NaeI very short patch repair endonuclease n=2 Ta... 154 6e-37 UniRef50_C9N7G6 DNA mismatch endonuclease Vsr n=5 Tax=Actinomyce... 153 2e-36 UniRef50_Q20YF6 DNA mismatch endonuclease vsr n=1 Tax=Rhodopseud... 153 2e-36 UniRef50_C7V3C2 Putative uncharacterized protein n=1 Tax=Enteroc... 153 2e-36 UniRef50_A0RY33 DNA G/T mismatch repair endonuclease n=1 Tax=Cen... 153 2e-36 UniRef50_Q04A40 T/G mismatch-specific endonuclease n=3 Tax=Bacte... 153 2e-36 UniRef50_D0L6H5 DNA mismatch endonuclease Vsr n=1 Tax=Gordonia b... 152 4e-36 UniRef50_B8G3L1 DNA mismatch endonuclease Vsr n=1 Tax=Chloroflex... 151 7e-36 UniRef50_UPI0001BCE75A DNA mismatch endonuclease Vsr n=1 Tax=Sel... 151 9e-36 UniRef50_A1SJ03 T/G mismatch-specific endonuclease n=1 Tax=Nocar... 150 2e-35 UniRef50_P36434 HpaII very short patch repair endonuclease n=1 T... 150 2e-35 UniRef50_C6D8V0 DNA mismatch endonuclease Vsr n=1 Tax=Paenibacil... 149 2e-35 UniRef50_Q2IF54 T/G mismatch-specific endonuclease n=1 Tax=Anaer... 149 3e-35 UniRef50_A1UB42 DNA mismatch endonuclease vsr n=4 Tax=Actinomyce... 149 3e-35 UniRef50_UPI0001B4F16E very short patch repair protein n=1 Tax=S... 148 5e-35 UniRef50_C7XVZ3 Short-patch-repair endonuclease n=1 Tax=Lactobac... 147 1e-34 UniRef50_A1W7Y7 Putative very short patch repair protein n=3 Tax... 147 1e-34 UniRef50_A5CSG2 Putative patch repair endonuclease n=1 Tax=Clavi... 146 2e-34 UniRef50_B3Q989 DNA mismatch endonuclease Vsr n=4 Tax=Rhodopseud... 146 3e-34 UniRef50_B5HK48 Putative uncharacterized protein n=3 Tax=Strepto... 145 5e-34 UniRef50_UPI00016A6F51 putative very short patch repair protein ... 144 6e-34 UniRef50_C0ABV7 DNA G:T-mismatch repair endonuclease n=2 Tax=Ver... 144 8e-34 UniRef50_D1S9Q4 DNA mismatch endonuclease Vsr n=1 Tax=Micromonos... 143 3e-33 UniRef50_A6BKR1 Putative uncharacterized protein n=1 Tax=Dorea l... 141 5e-33 UniRef50_D1SGS2 DNA mismatch endonuclease Vsr n=2 Tax=Actinomyce... 140 1e-32 UniRef50_D0LEE5 DNA mismatch endonuclease Vsr n=2 Tax=Actinomyce... 140 1e-32 UniRef50_UPI0001B50D9E putative DNA mismatch endonuclease n=1 Ta... 140 1e-32 UniRef50_D0LCF9 DNA mismatch endonuclease Vsr n=1 Tax=Gordonia b... 140 1e-32 UniRef50_A4X2E7 DNA mismatch endonuclease vsr n=2 Tax=Actinomyce... 138 5e-32 UniRef50_A1T424 DNA mismatch endonuclease vsr n=12 Tax=Actinomyc... 137 9e-32 UniRef50_D2EGA7 DNA mismatch endonuclease Vsr n=1 Tax=Candidatus... 134 6e-31 UniRef50_A3TJK1 Putative DNA mismatch endonuclease n=1 Tax=Janib... 133 1e-30 UniRef50_A6WGD4 DNA mismatch endonuclease vsr n=3 Tax=Actinomyce... 125 5e-28 UniRef50_A4SC96 DNA mismatch endonuclease n=1 Tax=Chlorobium pha... 124 7e-28 UniRef50_D1PRX0 Short patch repair protein n=1 Tax=Subdoligranul... 116 2e-25 Sequences not found previously or not previously below threshold: UniRef50_D2SC98 DNA mismatch endonuclease vsr n=1 Tax=Geodermato... 79 4e-14 UniRef50_Q1PVK2 Putative uncharacterized protein n=1 Tax=Candida... 61 9e-09 UniRef50_Q1LHY8 Putative uncharacterized protein n=1 Tax=Cupriav... 51 1e-05 UniRef50_Q2NCJ2 Putative uncharacterized protein n=1 Tax=Erythro... 48 1e-04 UniRef50_B0G6N8 Putative uncharacterized protein n=1 Tax=Dorea f... 47 2e-04 UniRef50_A2STE7 Superfamily I DNA and RNA helicase and helicase ... 46 3e-04 UniRef50_Q0ASA3 Putative uncharacterized protein n=2 Tax=Alphapr... 46 3e-04 UniRef50_A4U073 Transposase, IS4 n=2 Tax=Alphaproteobacteria Rep... 46 5e-04 UniRef50_Q11JR2 Putative uncharacterized protein n=5 Tax=Alphapr... 46 5e-04 UniRef50_A7KV39 Mobile intron protein n=1 Tax=Bacillus phage 030... 45 7e-04 UniRef50_Q2KAA9 Hypothetical conserved protein n=4 Tax=Alphaprot... 45 8e-04 UniRef50_A6UBV3 Putative uncharacterized protein n=6 Tax=Rhizobi... 43 0.003 UniRef50_A1SC23 DEAD/DEAH box helicase domain protein n=3 Tax=Ac... 43 0.003 UniRef50_UPI000179168A PREDICTED: similar to C25F9.2 n=1 Tax=Acy... 43 0.004 UniRef50_C2AM99 Putative uncharacterized protein n=1 Tax=Tsukamu... 43 0.004 UniRef50_C2BJM6 Superfamily protein I DNA/RNA helicase n=1 Tax=C... 43 0.005 UniRef50_D1PRW7 Putative DNA mismatch endonuclease n=1 Tax=Subdo... 42 0.007 UniRef50_A4IT87 Putative uncharacterized protein n=4 Tax=Geobaci... 42 0.007 UniRef50_A4FK03 Similar to superfamily I DNA and RNA helicases a... 41 0.009 UniRef50_A0YCZ9 Putative uncharacterized protein n=1 Tax=marine ... 41 0.013 UniRef50_A0L4F1 Superfamily I DNA and RNA helicase and helicase ... 41 0.015 UniRef50_C6XHF9 Putative uncharacterized protein n=1 Tax=Candida... 40 0.018 UniRef50_B3QHM0 Putative uncharacterized protein n=9 Tax=Bradyrh... 40 0.020 UniRef50_Q469I5 Putative uncharacterized protein n=3 Tax=Methano... 40 0.021 UniRef50_A0QLP5 Putative uncharacterized protein n=3 Tax=Mycobac... 40 0.028 UniRef50_A9VZY5 Putative uncharacterized protein n=1 Tax=Methylo... 39 0.033 UniRef50_D0J3F2 Putative uncharacterized protein n=2 Tax=Comamon... 39 0.034 UniRef50_A3UG08 Putative uncharacterized protein n=1 Tax=Oceanic... 39 0.034 UniRef50_UPI0001C31113 protein of unknown function DUF559 n=3 Ta... 39 0.036 UniRef50_A6E483 DNA helicase, putative n=1 Tax=Roseovarius sp. T... 39 0.036 UniRef50_C7JHU4 DNA helicase n=7 Tax=Acetobacter pasteurianus Re... 39 0.037 UniRef50_C7IBV6 Superfamily I DNA and RNA helicase and helicase ... 39 0.045 UniRef50_C3BCE6 Putative uncharacterized protein n=8 Tax=Bacillu... 39 0.046 UniRef50_Q2LRI4 DNA helicase n=2 Tax=Bacteria RepID=Q2LRI4_SYNAS 39 0.047 UniRef50_Q1GS85 Putative uncharacterized protein n=1 Tax=Sphingo... 39 0.047 UniRef50_B0T195 Putative uncharacterized protein n=2 Tax=Cauloba... 39 0.050 UniRef50_A5CT51 Putative uncharacterized protein n=2 Tax=Claviba... 39 0.050 UniRef50_Q3MA76 Putative uncharacterized protein n=1 Tax=Anabaen... 39 0.053 UniRef50_D0LMZ5 DEAD/DEAH box helicase domain protein n=1 Tax=Ha... 39 0.065 UniRef50_Q7UM88 Putative uncharacterized protein n=1 Tax=Rhodopi... 38 0.071 UniRef50_B9Q5R9 Putative uncharacterized protein n=3 Tax=Toxopla... 38 0.072 UniRef50_C6JN47 Helicase n=7 Tax=Bacteria RepID=C6JN47_FUSVA 38 0.074 UniRef50_D2LHC1 Putative DNA helicase n=1 Tax=Rhodomicrobium van... 38 0.079 UniRef50_B8GSF1 Putative uncharacterized protein n=2 Tax=Gammapr... 38 0.080 UniRef50_Q8PQ75 Putative uncharacterized protein n=1 Tax=Xanthom... 38 0.082 UniRef50_A9D2E6 Putative uncharacterized protein n=1 Tax=Hoeflea... 38 0.086 UniRef50_A9FYY3 Putative uncharacterized protein n=1 Tax=Phaeoba... 38 0.087 UniRef50_B9LVP4 Type III restriction protein res subunit n=1 Tax... 38 0.087 UniRef50_B7GPT1 Putative uncharacterized protein n=5 Tax=Bifidob... 38 0.098 >UniRef50_P09184 Very short patch repair protein n=115 Tax=Enterobacteriaceae RepID=VSR_ECOLI Length = 156 Score = 227 bits (578), Expect = 1e-58, Method: Composition-based stats. Identities = 156/156 (100%), Positives = 156/156 (100%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV Sbjct: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR Sbjct: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 Query: 121 GREKLTDEALTERLEEWICGEGASAQIDTQGIHLLA 156 GREKLTDEALTERLEEWICGEGASAQIDTQGIHLLA Sbjct: 121 GREKLTDEALTERLEEWICGEGASAQIDTQGIHLLA 156 >UniRef50_A1BCM5 T/G mismatch-specific endonuclease n=12 Tax=Bacteria RepID=A1BCM5_CHLPD Length = 176 Score = 213 bits (544), Expect = 1e-54, Method: Composition-based stats. Identities = 68/150 (45%), Positives = 87/150 (58%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 MADV TRS+ M I + +T E R+ L +G FR+ LPG+PD V +YR V Sbjct: 1 MADVVSPETRSRMMSGIRSENTVPEMRVRRGLHARGFRFRLHCGGLPGKPDIVFPKYRAV 60 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 IF HGCFWH H C LFK P TR +FW +KIGKN RD + L GWRVLIVWECAL+ Sbjct: 61 IFIHGCFWHAHECPLFKWPKTREDFWKKKIGKNRIRDLAVMDELARQGWRVLIVWECALK 120 Query: 121 GREKLTDEALTERLEEWICGEGASAQIDTQ 150 G+ + + + + EW+ +I Q Sbjct: 121 GKGRRPIDEVVDSCAEWLLSSSTKREIRGQ 150 >UniRef50_B0KIU4 DNA mismatch endonuclease Vsr n=1 Tax=Pseudomonas putida GB-1 RepID=B0KIU4_PSEPG Length = 158 Score = 211 bits (538), Expect = 6e-54, Method: Composition-based stats. Identities = 67/132 (50%), Positives = 81/132 (61%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M DVH RS+NMRAI +DT E + L +G +R+ A LPG PD V+ +YR Sbjct: 1 MVDVHTPEARSRNMRAIRNKDTKPELLIRKALHARGFRYRLGGAGLPGHPDIVLPKYRTA 60 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 IF HGCFWH H+C FK+PATRTEFW KI N ERD+R S L E GW VL VWEC+L+ Sbjct: 61 IFIHGCFWHGHNCKYFKLPATRTEFWAGKIRSNQERDQRSTSLLVEQGWSVLTVWECSLK 120 Query: 121 GREKLTDEALTE 132 + L E Sbjct: 121 PSGPGVEAVLHE 132 >UniRef50_Q0AK56 T/G mismatch-specific endonuclease n=8 Tax=Proteobacteria RepID=Q0AK56_MARMM Length = 168 Score = 207 bits (528), Expect = 8e-53, Method: Composition-based stats. Identities = 67/146 (45%), Positives = 86/146 (58%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M DV D ATRS+ M I ++T E + L G+ +R+ D LPG+PD V+ +YR V Sbjct: 1 MPDVVDSATRSRMMAGIKAKNTKPEMLVRRGLHAMGIRYRLHDKRLPGKPDLVLPKYRSV 60 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 IF HGCFWH H C FK P TR +FW EKI N +RD + IS L GWRV +VWECALR Sbjct: 61 IFVHGCFWHGHDCPAFKWPKTREKFWREKISTNRKRDEKQISDLVRSGWRVSVVWECALR 120 Query: 121 GREKLTDEALTERLEEWICGEGASAQ 146 + E + + L WI +A+ Sbjct: 121 SKTPDKVETILKLLASWIEQREIAAE 146 >UniRef50_D0C733 T/G mismatch-specific endonuclease n=1 Tax=Acinetobacter baumannii ATCC 19606 RepID=D0C733_ACIBA Length = 174 Score = 207 bits (527), Expect = 9e-53, Method: Composition-based stats. Identities = 68/154 (44%), Positives = 90/154 (58%), Gaps = 2/154 (1%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M D+ D ATRS+ M I R+T E + SLL QG FR+ LPG+PD V+ +Y+ + Sbjct: 1 MVDIVDSATRSRMMSNIKGRNTKPELLIRSLLHAQGFRFRIHRKDLPGKPDIVLPKYKAI 60 Query: 61 IFTHGCFWHHH-HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 IF HGCFWH H +C LFK+P +RTEFW KI KN + D + L GWR+ +WECA+ Sbjct: 61 IFIHGCFWHGHQNCRLFKLPGSRTEFWEAKISKNQDNDLKTKELLLNSGWRICTIWECAV 120 Query: 120 RGREKLTDEALTERLEEWICGEGASAQIDTQGIH 153 R R K AL L +W+ +ID I+ Sbjct: 121 R-RSKKDPVALMNILTKWLSCSEQLLEIDEPMIN 153 >UniRef50_Q5QV95 DNA mismatch endonuclease, patch repair protein n=1 Tax=Idiomarina loihiensis RepID=Q5QV95_IDILO Length = 171 Score = 206 bits (525), Expect = 2e-52, Method: Composition-based stats. Identities = 67/152 (44%), Positives = 95/152 (62%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 MADVH+ R KNMRAI +RDT+IE ++ +L G +R+ +LPG+PD + +YR V Sbjct: 1 MADVHNTEQRRKNMRAIKSRDTSIEIQVRRILWHAGYRYRLNVKALPGKPDIYLPKYRAV 60 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 I +GC WH H+C F +P TRTEFW KI NV RD + ++ L + G R+L++WECAL+ Sbjct: 61 IQINGCLWHGHNCPQFVLPKTRTEFWRNKIKDNVRRDLKSVAALHDKGLRLLVIWECALQ 120 Query: 121 GREKLTDEALTERLEEWICGEGASAQIDTQGI 152 G+ +L + L W+ A ID QG+ Sbjct: 121 GKARLDNRYTYNLLNRWLSSTELLANIDKQGL 152 >UniRef50_B4RGD5 Patch repair protein n=4 Tax=Bacteria RepID=B4RGD5_PHEZH Length = 164 Score = 203 bits (518), Expect = 1e-51, Method: Composition-based stats. Identities = 62/150 (41%), Positives = 74/150 (49%) Query: 2 ADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVI 61 AD R +NM AI +T E + L GL +R+ D LPG PD V R + Sbjct: 9 ADPLTPQQRRRNMAAIRAANTKPEMLVRRGLHAHGLRYRLHDRGLPGTPDLVFRSARVAV 68 Query: 62 FTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRG 121 F HGCFWH H C L P T +FW KI +N ERD + L LGWRV VWECALRG Sbjct: 69 FVHGCFWHGHDCSLGVRPRTNADFWTAKINRNRERDEAAEAALLMLGWRVATVWECALRG 128 Query: 122 REKLTDEALTERLEEWICGEGASAQIDTQG 151 RE+ RL +I SA + Sbjct: 129 RERPPLPETLGRLAAFIRSGSPSALVLRSP 158 >UniRef50_D1T035 DNA mismatch endonuclease Vsr n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1T035_9BURK Length = 152 Score = 203 bits (517), Expect = 2e-51, Method: Composition-based stats. Identities = 62/152 (40%), Positives = 81/152 (53%), Gaps = 3/152 (1%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M DV A RS+ M I +++ E + L G FR+ LPG PD + + Sbjct: 1 MVDVVSPAKRSQMMSGIKGKNSLPEMLVRKALFAMGHRFRLHRRDLPGTPDIAMPGRKIA 60 Query: 61 IFTHGCFWHHH-HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 IF HGCFWH H C K P+TRTEFW K+ NV+RDRR +L E+GWRVL VWEC+ Sbjct: 61 IFVHGCFWHAHQGCKYAKTPSTRTEFWTTKLQGNVDRDRRAADKLAEMGWRVLNVWECST 120 Query: 120 RGREKLTDEALTERLEEWICGEGASAQIDTQG 151 R +T E L++ L WI + +I Sbjct: 121 RDP--VTAEGLSDALRAWIDSDAPVGEIRAPS 150 >UniRef50_A9GYW9 DNA mismatch endonuclease vsr n=1 Tax=Roseobacter litoralis Och 149 RepID=A9GYW9_9RHOB Length = 146 Score = 202 bits (514), Expect = 3e-51, Method: Composition-based stats. Identities = 64/138 (46%), Positives = 88/138 (63%) Query: 14 MRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHHC 73 M AI +T E + L +G +R+ D+ L GRPD V+ YR V+F +GCFWH H C Sbjct: 1 MAAIRGINTKPELLIRHGLHARGFRYRLHDSKLAGRPDLVLPRYRAVVFVNGCFWHGHDC 60 Query: 74 YLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTER 133 LFK P TR EFW KIG NVERD+R+++ L+ GWRV IVWEC L+G+++L + Sbjct: 61 PLFKWPKTREEFWRGKIGGNVERDQRNLAALKAAGWRVGIVWECVLKGKQRLQPTKVLGL 120 Query: 134 LEEWICGEGASAQIDTQG 151 L EWI G+ ++ I+ +G Sbjct: 121 LSEWIEGDTSACSIEGRG 138 >UniRef50_A0LQ21 T/G mismatch-specific endonuclease n=3 Tax=Proteobacteria RepID=A0LQ21_SYNFM Length = 165 Score = 200 bits (509), Expect = 1e-50, Method: Composition-based stats. Identities = 59/145 (40%), Positives = 80/145 (55%), Gaps = 1/145 (0%) Query: 3 DVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIF 62 D DK TRS+ M + +DT E +L L GL +R+ D LPG PD V ++ +F Sbjct: 2 DTVDKTTRSRIMSRVGQKDTGPEMKLRRSLHKIGLRYRLHDKRLPGSPDIVFPRFKAALF 61 Query: 63 THGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGR 122 HGCFWH H C P T +FW +K +N+ RDRR I LQ+ GWRV +VWEC+L+G+ Sbjct: 62 VHGCFWHRHGCKATTTPGTNVDFWRKKFDENIARDRRHIEALQDAGWRVAVVWECSLKGK 121 Query: 123 EKLTDEALTERLEEWICGEGASAQI 147 DE + + EW+ I Sbjct: 122 RADPDE-VARLVSEWLVSSEKHKVI 145 >UniRef50_Q21TW8 T/G mismatch-specific endonuclease n=5 Tax=Proteobacteria RepID=Q21TW8_RHOFD Length = 152 Score = 199 bits (506), Expect = 3e-50, Method: Composition-based stats. Identities = 63/152 (41%), Positives = 80/152 (52%), Gaps = 3/152 (1%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 MADV RS+ M I ++T E + +L G FR+ LPG PD V+ + Sbjct: 1 MADVVSPTVRSRMMSGIKGKNTQPEILVRRMLFASGYRFRLHRRDLPGTPDIVMPGRKIA 60 Query: 61 IFTHGCFWHHH-HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 IF HGCFWH H C K+P TR +FW K+ N+ERDRR + RLQ LGWRVL VWEC+ Sbjct: 61 IFVHGCFWHFHRGCRFAKMPVTRADFWKAKLEANMERDRRAVERLQGLGWRVLCVWECST 120 Query: 120 RGREKLTDEALTERLEEWICGEGASAQIDTQG 151 R + L L EWI + +I Sbjct: 121 RDAKATVS--LQGTLCEWIESDARLGEIGAPS 150 >UniRef50_C9L355 XorII very short patch repair endonuclease n=2 Tax=Bacteroidetes RepID=C9L355_9BACE Length = 138 Score = 198 bits (503), Expect = 6e-50, Method: Composition-based stats. Identities = 51/139 (36%), Positives = 84/139 (60%), Gaps = 2/139 (1%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M+D+ + RS M I+++DT E + L +G +R+ +LPG+PD V+ +Y+ + Sbjct: 1 MSDIFSQTKRSDIMSKISSKDTKPEILVRKFLFSKGFRYRINVKTLPGKPDIVLPKYKTI 60 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 IF +GCFWH H+C K+P++ T+FW EKI N RD ++ L +LGW+V+I+W+C + Sbjct: 61 IFVNGCFWHGHNCKKGKLPSSNTDFWKEKISNNKSRDAKNSDLLVKLGWKVIIIWQCEIS 120 Query: 121 GREKLTDEALTERLEEWIC 139 + T + +L E I Sbjct: 121 KIDNRT--KILNKLLEDIK 137 >UniRef50_B3EJE0 DNA mismatch endonuclease Vsr n=2 Tax=Bacteria RepID=B3EJE0_CHLPB Length = 153 Score = 197 bits (501), Expect = 1e-49, Method: Composition-based stats. Identities = 56/145 (38%), Positives = 80/145 (55%), Gaps = 1/145 (0%) Query: 3 DVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIF 62 DV RS NM I ++T E + L G +R+ LPG+PD V+ +YR VIF Sbjct: 2 DVLSPKQRSFNMSRIRGKNTRPEIMVRKWLWANGYRYRLHRKDLPGKPDIVLPKYRAVIF 61 Query: 63 THGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGR 122 HGCFWH H C P TR +FW K +NV RD+R+I L E WRV+++WEC+L G+ Sbjct: 62 VHGCFWHRHGCTFTTTPDTRRDFWYTKFEENVARDKRNIKYLLEQYWRVMVIWECSLIGK 121 Query: 123 EKLTDEALTERLEEWICGEGASAQI 147 ++ + E L +++ E + Sbjct: 122 NAAPEQVVVE-LTDFLNSETCFTET 145 >UniRef50_D1QVC0 Patch repair protein n=1 Tax=Prevotella oris F0302 RepID=D1QVC0_9BACT Length = 172 Score = 195 bits (497), Expect = 3e-49, Method: Composition-based stats. Identities = 54/152 (35%), Positives = 79/152 (51%), Gaps = 2/152 (1%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M+D H R NM AI +DT E + L G +R+ LPGRPD V+ +YR Sbjct: 1 MSDTHTPQQRHANMAAIHGKDTKPELVVRKWLWNHGYRYRLNHPRLPGRPDIVLRKYRTC 60 Query: 61 IFTHGCFWHHHH-CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 IF +GCFWH H C + VP T EFW+ KI +N +RD +L +GW + +WEC L Sbjct: 61 IFVNGCFWHGHEGCKYYTVPKTNMEFWINKIRRNRKRDHEVCQKLSSMGWHCITIWECEL 120 Query: 120 RGREKL-TDEALTERLEEWICGEGASAQIDTQ 150 + ++ T E+L L + + + + + Sbjct: 121 KSYDRERTLESLAFTLNKIFLQDHSIRRYEIP 152 >UniRef50_C7PIW0 DNA mismatch endonuclease Vsr n=8 Tax=Bacteroidetes RepID=C7PIW0_CHIPD Length = 140 Score = 195 bits (495), Expect = 5e-49, Method: Composition-based stats. Identities = 62/138 (44%), Positives = 84/138 (60%), Gaps = 2/138 (1%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M DVH K TRS NM I ++T E + L QG +R+ + LPG PD V+ +Y+ V Sbjct: 1 MVDVHSKETRSYNMSQIKGKNTKPEILVRKFLFAQGYRYRLHNKKLPGTPDLVLPKYKTV 60 Query: 61 IFTHGCFWHHHH-CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 IF HGCFWH H C F +P TRTE+WL KI NV +D I+ L+ +GWR+LI+WEC L Sbjct: 61 IFIHGCFWHRHEGCRYFVIPKTRTEWWLNKINGNVRKDIESINLLKSMGWRILILWECDL 120 Query: 120 R-GREKLTDEALTERLEE 136 + +++ E L + L Sbjct: 121 KPDKKEHRLELLLKELNA 138 >UniRef50_A9H9K5 DNA mismatch endonuclease Vsr n=4 Tax=Proteobacteria RepID=A9H9K5_GLUDA Length = 153 Score = 194 bits (494), Expect = 7e-49, Method: Composition-based stats. Identities = 55/132 (41%), Positives = 76/132 (57%), Gaps = 1/132 (0%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 MAD + RS+ M I ++DT E L L GL FR+ A LPGRPD V+ +R Sbjct: 1 MADFLEPLERSRRMGRIRSQDTKPEIALRRALHRLGLRFRLGGAGLPGRPDIVLPRHRAA 60 Query: 61 IFTHGCFWHHHH-CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 +F HGCFWH H C + P + T+FW+ + +NV RD + + LQELGW V ++WEC L Sbjct: 61 VFVHGCFWHRHPGCKVASTPKSNTDFWVARFDRNVARDGKVMRELQELGWNVFVIWECEL 120 Query: 120 RGREKLTDEALT 131 + +L+ A Sbjct: 121 SAKSRLSPTATQ 132 >UniRef50_Q5NYW8 Very short patch repair protein (DNA mismatch endonuclease) n=2 Tax=Proteobacteria RepID=Q5NYW8_AZOSE Length = 157 Score = 193 bits (492), Expect = 1e-48, Method: Composition-based stats. Identities = 63/152 (41%), Positives = 82/152 (53%), Gaps = 3/152 (1%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 MAD+ D ATRSK M +I ++T E ++ L G+ FR+ LPG PD V +YR Sbjct: 1 MADIVDPATRSKIMASIRGKNTKPELQVRRGLHQLGVRFRLHRRDLPGSPDLVFPKYRAA 60 Query: 61 IFTHGCFWHHHH-CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 +F HGCFWH H C L P+ W+EK NVERDRR I+ LQ+ GWRV ++WECAL Sbjct: 61 LFVHGCFWHRHDSCRLAYTPSDNGHKWVEKFKANVERDRRQIALLQQAGWRVFVIWECAL 120 Query: 120 RGREKLTDEALTERLEEWICGEGASAQIDTQG 151 R + + L E G + T Sbjct: 121 RAND--LSDLLVAVAAELKTGVSTYREWPTSP 150 >UniRef50_B3QE76 DNA mismatch endonuclease Vsr n=1 Tax=Rhodopseudomonas palustris TIE-1 RepID=B3QE76_RHOPT Length = 152 Score = 193 bits (491), Expect = 1e-48, Method: Composition-based stats. Identities = 57/138 (41%), Positives = 77/138 (55%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M DV + R NM I +T E + S L G FR+ D LPG PD V+ +R V Sbjct: 1 MTDVLSREQRRFNMSRIRGSNTKPEVLVRSALHALGFRFRLHDRRLPGTPDIVLRRHRAV 60 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 IF +GCFWH H C K+P TR EFW +KI + RD I +L LGW V++VWEC+LR Sbjct: 61 IFVNGCFWHGHGCKYSKMPNTRAEFWRQKISRTKARDTAAIEQLLNLGWNVIVVWECSLR 120 Query: 121 GREKLTDEALTERLEEWI 138 GR+++ + + + Sbjct: 121 GRDQVARNSAWTSIRTAL 138 >UniRef50_B8F0E1 DNA mismatch endonuclease Vsr n=1 Tax=Thauera sp. MZ1T RepID=B8F0E1_THASP Length = 137 Score = 192 bits (489), Expect = 3e-48, Method: Composition-based stats. Identities = 59/137 (43%), Positives = 80/137 (58%) Query: 13 NMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHH 72 M I +++T IE L L QG +R+ DA LPG+PD V+ YR V+F HGCFWH H Sbjct: 1 MMAGIRSKNTRIEVSLRKALFAQGFRYRINDARLPGKPDIVLPRYRAVVFVHGCFWHGHD 60 Query: 73 CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTE 132 C LF++PA+ T+FW KI N RD R L GWRV ++WECA+RG+++ A+ E Sbjct: 61 CSLFRLPASNTDFWRTKIDTNRARDERACGELAAQGWRVAVIWECAIRGKKEAGVMAVAE 120 Query: 133 RLEEWICGEGASAQIDT 149 L+ W+ I Sbjct: 121 SLQAWLKIGAPQLVIRG 137 >UniRef50_A1B3R0 T/G mismatch-specific endonuclease n=2 Tax=Rhodobacteraceae RepID=A1B3R0_PARDP Length = 154 Score = 190 bits (484), Expect = 1e-47, Method: Composition-based stats. Identities = 65/148 (43%), Positives = 82/148 (55%), Gaps = 3/148 (2%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M D+ D+ TRS+ M I ++T E L L +G FR+ + GRPD + ++R V Sbjct: 1 MTDIVDQQTRSRMMSGIKGKNTKPELALRRALHSRGFRFRLHSGKVHGRPDLALPKHRAV 60 Query: 61 IFTHGCFWHHHH-CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 +F HGCFWH H C VPATR EFW K N RD +RL E GWRV VWECAL Sbjct: 61 VFVHGCFWHRHEGCRYATVPATRPEFWRAKFEANAARDSAVRTRLLEDGWRVATVWECAL 120 Query: 120 RGREKLTDEALTERLEEWICGEGASAQI 147 R E++ EA TE L W+ E +I Sbjct: 121 RKPEQV--EASTESLSIWLRTEELQIEI 146 >UniRef50_Q1PVJ9 Strongly similar to very short patch repair endonuclease n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PVJ9_9BACT Length = 138 Score = 190 bits (483), Expect = 1e-47, Method: Composition-based stats. Identities = 61/138 (44%), Positives = 85/138 (61%), Gaps = 2/138 (1%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M DVHDK TRS NM I +DT E + L G G +++ D LPG+PD V +Y+ V Sbjct: 1 MTDVHDKKTRSYNMSKIRGKDTKPEIIVRKFLFGNGFRYKLHDKMLPGKPDLVFPKYKTV 60 Query: 61 IFTHGCFWHHHH-CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 +F HGCFWH H C F +P TR ++WLEKI +N + D + +L++LGW++L V+EC L Sbjct: 61 VFIHGCFWHGHDGCKYFVIPKTRRKWWLEKINRNKQLDTENSGKLKKLGWKILTVFECKL 120 Query: 120 R-GREKLTDEALTERLEE 136 + G + T L RL + Sbjct: 121 KHGNMENTLNRLATRLTK 138 >UniRef50_Q3IVR8 T/G mismatch-specific endonuclease n=4 Tax=Bacteria RepID=Q3IVR8_RHOS4 Length = 142 Score = 190 bits (483), Expect = 1e-47, Method: Composition-based stats. Identities = 53/125 (42%), Positives = 76/125 (60%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 MAD R + MRA+ T++T E + SLL +G +R+ SLPG+PD V Sbjct: 1 MADTRSPEQRRQIMRAVGTKNTGPELIVRSLLHAKGYRYRLHARSLPGQPDIVFPARHKA 60 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 IF +GCFWH H C ++P +R ++W KI NV RDRR +S L+ LGW+ L+VW+C L+ Sbjct: 61 IFVNGCFWHGHDCAKGRLPTSRLDYWGPKIEANVARDRRKLSELEALGWQTLVVWQCELK 120 Query: 121 GREKL 125 E++ Sbjct: 121 DIERV 125 >UniRef50_A3WFL9 DNA mismatch endonuclease Vsr, putative n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WFL9_9SPHN Length = 154 Score = 190 bits (482), Expect = 2e-47, Method: Composition-based stats. Identities = 57/154 (37%), Positives = 86/154 (55%), Gaps = 2/154 (1%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M D+ D RS+ M I ++T E + LL G +R+ LPG+PD V+ ++R V Sbjct: 1 MVDIVDPQKRSEMMSGIGGKNTKPELFIRKLLHKGGFRYRLHRKDLPGKPDLVLGKWRTV 60 Query: 61 IFTHGCFWHHH-HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 +F GCFWH H HC LF++P TR EFW +KI N+ RD + S+ + W+++ VWECA+ Sbjct: 61 LFVQGCFWHGHEHCPLFRLPKTRQEFWAKKIKSNIVRDDENRSKYLQTDWKLIEVWECAI 120 Query: 120 RGREKLTDEALTERLEEWI-CGEGASAQIDTQGI 152 +G+ +L + L + I + I Q I Sbjct: 121 KGKTRLDLDEFETLLVDAITTSQQKLISIRGQPI 154 >UniRef50_Q5ZW52 Patch repair protein n=2 Tax=Legionella RepID=Q5ZW52_LEGPH Length = 142 Score = 189 bits (481), Expect = 2e-47, Method: Composition-based stats. Identities = 51/122 (41%), Positives = 74/122 (60%), Gaps = 3/122 (2%) Query: 3 DVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIF 62 D+ K RS M +I ++T E + S L QGL FR+ +LPG+PD V +Y V+F Sbjct: 7 DMISKKQRSHIMSSIKGKNTKPEIIVRSFLHRQGLRFRLHSKNLPGQPDLVFRKYNAVVF 66 Query: 63 THGCFWHHHH---CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 +GCFWH H+ C +P T E+W KI +N RD+++I L++LGWRV ++WEC L Sbjct: 67 VNGCFWHGHNEPLCKNSHIPKTNFEYWWNKIERNKSRDKQNIEILKQLGWRVFMIWECEL 126 Query: 120 RG 121 + Sbjct: 127 KN 128 >UniRef50_A3N1K2 Putative DNA mismatch endonuclease n=2 Tax=Actinobacillus pleuropneumoniae RepID=A3N1K2_ACTP2 Length = 141 Score = 189 bits (481), Expect = 2e-47, Method: Composition-based stats. Identities = 50/136 (36%), Positives = 77/136 (56%), Gaps = 1/136 (0%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M D+ RS+ M + +++T E + + L G +R D G PD ++ +Y+ Sbjct: 1 MTDIFSPQKRSEIMSRVKSKNTKPEIIVRTFLFSVGFRYRKNDKRYAGVPDILLPKYKTA 60 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 IF HGCFWH H C +P++RTEFW KI KN ERD ++I L++ G V+I+WEC L+ Sbjct: 61 IFVHGCFWHGHTCAKGGLPSSRTEFWKNKIMKNKERDVKNIRLLEDSGIHVIIIWECELK 120 Query: 121 GREKLTDEALTERLEE 136 + L ++ L + E Sbjct: 121 NKT-LREKRLARLVNE 135 >UniRef50_C7LPG4 DNA mismatch endonuclease Vsr n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LPG4_DESBD Length = 154 Score = 189 bits (481), Expect = 2e-47, Method: Composition-based stats. Identities = 50/124 (40%), Positives = 72/124 (58%), Gaps = 1/124 (0%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M D+ +A RS M + + +T E+ L S L G +R+ +LPG+PD V +Y+ V Sbjct: 1 MTDILSQAERSVLMSKVKSTNTKPERILRSGLHRLGFRYRLNYKALPGKPDLVFPKYKAV 60 Query: 61 IFTHGCFWHHH-HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 IF HGC+WH H C P T +FW K +N+ RD+ S L ++GWR LIVWEC L Sbjct: 61 IFVHGCYWHRHVGCKHASTPNTNVDFWNLKFSENINRDKFVESELMKMGWRFLIVWECEL 120 Query: 120 RGRE 123 + ++ Sbjct: 121 KKKK 124 >UniRef50_Q9JWD6 Putative very short patch repair endonuclease n=18 Tax=Bacteria RepID=VSR_NEIMA Length = 140 Score = 188 bits (479), Expect = 4e-47, Method: Composition-based stats. Identities = 51/136 (37%), Positives = 81/136 (59%), Gaps = 1/136 (0%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M D+ + RS M I +++T E + L QG +R D G+PD V+ +Y+ V Sbjct: 1 MTDIFTTSKRSFVMLKIHSKETKPEVLVRKFLFFQGFRYRKNDKRYVGKPDIVLSKYKTV 60 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 +F HGCFW+ H C +P + T+FWLEKI KN ERD ++ + L+++G++V++VWEC L+ Sbjct: 61 VFIHGCFWYGHSCNKGHIPKSNTDFWLEKITKNCERDIKNETELEKIGFKVIVVWECELK 120 Query: 121 GREKLTDEALTERLEE 136 + + E L + E Sbjct: 121 NK-AICRERLNRLVRE 135 >UniRef50_A5V0Q2 T/G mismatch-specific endonuclease n=3 Tax=Bacteria RepID=A5V0Q2_ROSS1 Length = 136 Score = 187 bits (476), Expect = 7e-47, Method: Composition-based stats. Identities = 56/129 (43%), Positives = 81/129 (62%), Gaps = 1/129 (0%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M DV + RS+ M + +T+ E+ + SL+ G FR+ LPG+PD V+ +++ V Sbjct: 1 MPDVFNPEERSRIMAKVRGENTSPERLVRSLIHKMGYRFRLNVKDLPGKPDIVLKKHKKV 60 Query: 61 IFTHGCFWHHHH-CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 IF HGCFWH H C P++ TE+W +K+ +N+ RDR + +L+ LGW VLIVWEC Sbjct: 61 IFVHGCFWHQHEGCPHAARPSSNTEYWNKKLDRNMLRDREHMHKLEYLGWNVLIVWECET 120 Query: 120 RGREKLTDE 128 R REKL D+ Sbjct: 121 RDREKLVDK 129 >UniRef50_A3PQ65 T/G mismatch-specific endonuclease n=1 Tax=Rhodobacter sphaeroides ATCC 17029 RepID=A3PQ65_RHOS1 Length = 144 Score = 187 bits (476), Expect = 9e-47, Method: Composition-based stats. Identities = 53/128 (41%), Positives = 66/128 (51%), Gaps = 1/128 (0%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M D RS+NM I RDT E R+ S G GL FR+ LPG PD V R Sbjct: 2 MTDSLTPDARSRNMAKIRGRDTGPEMRVRSAAHGLGLRFRLYRRGLPGTPDLVFPSRRVA 61 Query: 61 IFTHGCFWHHHH-CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 +F HGCFWH H C P +R +FW K NV RD R L+ GW+ + +WEC Sbjct: 62 LFVHGCFWHRHPGCRFAYTPKSRVDFWEAKFEGNVSRDLRKNEDLEAAGWKSVTIWECET 121 Query: 120 RGREKLTD 127 R +KL++ Sbjct: 122 REPDKLSE 129 >UniRef50_Q5X687 Putative uncharacterized protein n=1 Tax=Legionella pneumophila str. Paris RepID=Q5X687_LEGPA Length = 151 Score = 186 bits (474), Expect = 1e-46, Method: Composition-based stats. Identities = 49/148 (33%), Positives = 86/148 (58%) Query: 3 DVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIF 62 D RS+ M+ + + + + E + L +GL +R+ D + G PD + +Y VIF Sbjct: 2 DKFPPKIRSEIMKRVKSNNNSPEIAIRKFLFNKGLRYRINDKDIFGTPDLFLKKYNAVIF 61 Query: 63 THGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGR 122 +GCFWH+H C L K+P T T +W+ K+ N ERD+R+I +L+++G+R+LI+W C+ G+ Sbjct: 62 YNGCFWHNHGCVLSKIPRTNTSYWINKLENNKERDKRNIEQLKKIGFRILIIWRCSHVGK 121 Query: 123 EKLTDEALTERLEEWICGEGASAQIDTQ 150 K + + + ++ WI + +I Sbjct: 122 NKTSLDQILNQIYSWILSDSTYKEIQPP 149 >UniRef50_D1BA88 DNA mismatch endonuclease Vsr n=6 Tax=Bacteria RepID=D1BA88_THEAS Length = 147 Score = 186 bits (474), Expect = 1e-46, Method: Composition-based stats. Identities = 48/120 (40%), Positives = 73/120 (60%), Gaps = 1/120 (0%) Query: 3 DVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIF 62 D H K RS NM I +++ E+ + L +G +R +LPG PD V+ +Y+ VIF Sbjct: 2 DNHTKEIRSYNMSRIRSKNNKPEELVRKYLFSKGFRYRKNVKALPGCPDIVLPKYKTVIF 61 Query: 63 THGCFWHHHH-CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRG 121 +GCFWH H C F P + E+W +K+ +N ERD + +L+++GW+V+IVWEC L+ Sbjct: 62 INGCFWHMHEGCPFFVWPKSNEEYWTKKLIRNKERDYENQEKLKQMGWKVIIVWECELKK 121 >UniRef50_D2LK67 DNA mismatch endonuclease Vsr n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LK67_RHOVA Length = 165 Score = 186 bits (473), Expect = 2e-46, Method: Composition-based stats. Identities = 58/143 (40%), Positives = 78/143 (54%), Gaps = 6/143 (4%) Query: 10 RSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWH 69 RS+ M+A+ + TA E + L G FRVQ LPG PD V+ +++ VIF HGCFWH Sbjct: 20 RSRIMQAVGQKHTAPEMTVRRTLYALGYRFRVQRRDLPGSPDIVLRKHKTVIFVHGCFWH 79 Query: 70 HHH-CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDE 128 H C +P TR EFW EK +NV RD+ L+++GW+VLIVWEC + + E Sbjct: 80 RHPLCKKATMPKTRLEFWTEKFDRNVARDQLTEIALRKMGWQVLIVWECETK-----SVE 134 Query: 129 ALTERLEEWICGEGASAQIDTQG 151 L +L E + D G Sbjct: 135 ILAAKLASAFTAEAYPSDSDLSG 157 >UniRef50_UPI000196BAC4 hypothetical protein CATMIT_00200 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196BAC4 Length = 137 Score = 186 bits (472), Expect = 2e-46, Method: Composition-based stats. Identities = 52/137 (37%), Positives = 79/137 (57%), Gaps = 1/137 (0%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M DV + RSK M I +D E + L G +R D SLPG PD V+ +YR V Sbjct: 1 MPDVFTQEQRSKVMSRIRGKDNKPETMVRKYLWHHGFRYRKNDKSLPGTPDIVILKYRTV 60 Query: 61 IFTHGCFWHHH-HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 +F +GCFWHHH C + P +R E+W++ I +NVE D ++ + LQ+L ++V++VWEC + Sbjct: 61 VFINGCFWHHHYGCKYGRYPQSRKEYWIKHIDRNVENDVKNYNLLQQLDYKVIVVWECEI 120 Query: 120 RGREKLTDEALTERLEE 136 + + L E + + Sbjct: 121 KEDFDHRMKLLIEEITQ 137 >UniRef50_Q2S7T9 DNA G:T-mismatch repair endonuclease n=6 Tax=Proteobacteria RepID=Q2S7T9_HAHCH Length = 138 Score = 186 bits (472), Expect = 3e-46, Method: Composition-based stats. Identities = 55/141 (39%), Positives = 83/141 (58%), Gaps = 6/141 (4%) Query: 8 ATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCF 67 RS+ M A+ ++DT E ++ LL G +R+ LP +PD V + VIF HGCF Sbjct: 1 MKRSEIMAAVKSKDTTPELKVRKLLHSLGYRYRLHANDLPCKPDIVFRSRKKVIFIHGCF 60 Query: 68 WHHHHCYL-FKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLT 126 WH H C ++P T E+W++KIG+N+ERDRR L +LGWR L++WEC L+ Sbjct: 61 WHGHPCKRGARMPKTNAEYWIKKIGRNIERDRRGYEALHQLGWRCLVLWECELKD----- 115 Query: 127 DEALTERLEEWICGEGASAQI 147 +AL E L ++ + +++I Sbjct: 116 MDALQETLHAFLEEDSHNSRI 136 >UniRef50_A1S287 T/G mismatch-specific endonuclease n=1 Tax=Shewanella amazonensis SB2B RepID=A1S287_SHEAM Length = 161 Score = 185 bits (471), Expect = 3e-46, Method: Composition-based stats. Identities = 59/150 (39%), Positives = 86/150 (57%), Gaps = 6/150 (4%) Query: 7 KATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGC 66 K RS NM I DT E L + G +R+ D LPG+PD V +YR VIF +GC Sbjct: 2 KDKRSYNMSRIRGEDTRPEMWLRKRIHALGFRYRLHDKRLPGKPDLVFPKYRAVIFVNGC 61 Query: 67 FWHHHHCYLFKVPATRT------EFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 FWH HHC F+ PA+ + ++W EK+ N +RD +I + +EL WRVL++WECAL+ Sbjct: 62 FWHMHHCRFFQFPASSSTKGRGPQWWREKLIGNRQRDLENIEKCRELRWRVLVLWECALK 121 Query: 121 GREKLTDEALTERLEEWICGEGASAQIDTQ 150 G EKL + + +++ +W+ +I Sbjct: 122 GTEKLPEPQVLQQITQWLESGCHYLEIPAP 151 >UniRef50_Q31CG2 T/G mismatch-specific endonuclease n=5 Tax=Bacteria RepID=Q31CG2_PROM9 Length = 138 Score = 185 bits (471), Expect = 3e-46, Method: Composition-based stats. Identities = 51/125 (40%), Positives = 71/125 (56%), Gaps = 1/125 (0%) Query: 7 KATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGC 66 RS+NM AI +++T E + LL G FR+ LPG PD V+ +Y+ VIF HGC Sbjct: 10 SEQRSRNMSAIKSKNTKPEIAVRKLLHSMGFRFRLHRKDLPGSPDIVLPKYKTVIFVHGC 69 Query: 67 FWHHH-HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKL 125 FWH H +C P TR EFW K NV+RD +++ +GW+ +++WEC L + L Sbjct: 70 FWHRHENCKYASNPKTRKEFWKSKFKANVKRDLEIQEKIKNIGWQSVVIWECELTKIQYL 129 Query: 126 TDEAL 130 D L Sbjct: 130 KDTFL 134 >UniRef50_A1U1D0 T/G mismatch-specific endonuclease n=2 Tax=Proteobacteria RepID=A1U1D0_MARAV Length = 137 Score = 185 bits (470), Expect = 4e-46, Method: Composition-based stats. Identities = 54/122 (44%), Positives = 72/122 (59%), Gaps = 1/122 (0%) Query: 6 DKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHG 65 RS+ MRA+ +RDT E + L GL + + D LPG PD V +YR V+F HG Sbjct: 4 TPEQRSRTMRAVRSRDTKPELTVRRFLHAAGLRYLLHDRRLPGSPDLVFPKYRTVVFVHG 63 Query: 66 CFWHHHH-CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREK 124 CFWH H C P T TE+W K+ +NVERD R+ + L+ GW VL++WEC +R R+ Sbjct: 64 CFWHQHPNCAAASRPQTNTEYWSRKLTRNVERDERNRAELEASGWTVLVIWECEIRKRDA 123 Query: 125 LT 126 L Sbjct: 124 LD 125 >UniRef50_B9E7L5 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E7L5_MACCJ Length = 175 Score = 185 bits (469), Expect = 5e-46, Method: Composition-based stats. Identities = 55/138 (39%), Positives = 80/138 (57%), Gaps = 3/138 (2%) Query: 4 VHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFT 63 V ++ T +K M A + + + E + L +G+ +R D PG PD + +Y+ +F Sbjct: 41 VMEEHTLNKTMVANSKKKSKPEDIVRKFLYSKGIRYRKNDKRFPGSPDIYIPKYKTAVFV 100 Query: 64 HGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGRE 123 +GCFWH H+C LF +P + EFW +K +NV RD R+I L ELG RV++VWEC L+ E Sbjct: 101 NGCFWHVHNCDLFVMPKSNQEFWEKKFNRNVSRDERNIEELTELGIRVIVVWECGLKPLE 160 Query: 124 KLTDEALTERLEEWICGE 141 + E E L E I GE Sbjct: 161 R---EETLEALYEMIIGE 175 >UniRef50_Q56829 XorII very short patch repair endonuclease n=16 Tax=Proteobacteria RepID=VSX2_XANOR Length = 136 Score = 185 bits (469), Expect = 6e-46, Method: Composition-based stats. Identities = 49/126 (38%), Positives = 67/126 (53%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M D R M+ + +++T EK + SLL G FR+ LPG PD V R V Sbjct: 1 MTDRLSPERRRYLMQQVRSKNTRPEKAVRSLLHSIGYRFRLHRKDLPGTPDIVFPSRRLV 60 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 +F HGCFWH H C + ++P +R ++W KI N RD+R + L GWRV +VW+C L Sbjct: 61 LFVHGCFWHGHGCRIGQLPKSRLDYWSPKIEANRARDQRKEAALAAEGWRVAVVWQCELS 120 Query: 121 GREKLT 126 L Sbjct: 121 DLGALE 126 >UniRef50_Q28ND8 T/G mismatch-specific endonuclease n=1 Tax=Jannaschia sp. CCS1 RepID=Q28ND8_JANSC Length = 156 Score = 184 bits (468), Expect = 8e-46, Method: Composition-based stats. Identities = 54/120 (45%), Positives = 67/120 (55%), Gaps = 1/120 (0%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M D+ TRS+ M +I R+T E + L G FR+ SLPG PD V+ ++R Sbjct: 1 MVDIVSAETRSRMMASIRRRNTKPEMVVRQELHAAGFRFRLDVRSLPGSPDIVLPKWRTA 60 Query: 61 IFTHGCFWHHH-HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 IF HGCFWH H C PATR +FW K NV RD + L E+GW+V IVWEC L Sbjct: 61 IFVHGCFWHRHAGCKYASTPATRPKFWQAKFEANVRRDCSNERALIEMGWKVAIVWECGL 120 >UniRef50_Q64Q05 Putative very-short-patch-repair endonuclease n=4 Tax=Bacteroides RepID=Q64Q05_BACFR Length = 171 Score = 183 bits (464), Expect = 2e-45, Method: Composition-based stats. Identities = 50/122 (40%), Positives = 66/122 (54%), Gaps = 1/122 (0%) Query: 3 DVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIF 62 D+ +K RS M I +DT E + L +G +R LPG PD V+ +Y VIF Sbjct: 2 DIWNKKKRSAVMAKIKGKDTKPEWIVRRYLFSRGYRYRKNVKGLPGTPDIVLRKYGIVIF 61 Query: 63 THGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGR 122 HGCFWH H +P T EFW KI N RD R+ L+++GW V+IVWEC L+ Sbjct: 62 IHGCFWHGHEVD-GTMPKTNREFWKNKIEGNKLRDERNKEELRKMGWSVIIVWECQLKPA 120 Query: 123 EK 124 + Sbjct: 121 VR 122 >UniRef50_C9RP57 DNA mismatch endonuclease Vsr n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RP57_FIBSS Length = 168 Score = 183 bits (464), Expect = 2e-45, Method: Composition-based stats. Identities = 51/146 (34%), Positives = 75/146 (51%), Gaps = 5/146 (3%) Query: 7 KATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGC 66 TRS+ M+A+ + DT E + L G +R+ LPG PD V +Y IF +GC Sbjct: 23 PMTRSQMMQAVHSEDTKPEMIVRKALFEAGFRYRLHRRDLPGTPDIFVQKYGVAIFVNGC 82 Query: 67 FWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR-----G 121 FWH H C L P + + FW +K +N+ RD + L LG+RV IVWEC+LR Sbjct: 83 FWHQHGCKLTSRPKSNSAFWNDKFDRNIVRDIKTQHELSLLGYRVAIVWECSLRVEGVAD 142 Query: 122 REKLTDEALTERLEEWICGEGASAQI 147 + ERL ++I + + ++ Sbjct: 143 AGNMGAALTLERLIDFIKSDDETIEL 168 >UniRef50_C5B599 DNA mismatch endonuclease vsr n=2 Tax=Methylobacterium RepID=C5B599_METEA Length = 150 Score = 182 bits (463), Expect = 3e-45, Method: Composition-based stats. Identities = 54/118 (45%), Positives = 60/118 (50%), Gaps = 1/118 (0%) Query: 3 DVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIF 62 D D A RS M I DT E + G FR+ SLPGRPD V R IF Sbjct: 2 DTLDPARRSALMGRIRGVDTGPEMAVRRAAHRLGYRFRLHRRSLPGRPDLVFPSRRAAIF 61 Query: 63 THGCFWHHHH-CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 HGCFWH H C P TR EFW K +NVERD + RL GWRVL++WEC Sbjct: 62 VHGCFWHRHEGCSKASTPKTRVEFWQAKFARNVERDAQVQERLATAGWRVLVIWECET 119 >UniRef50_A4G657 Very short patch repair protein (DNA mismatch endonuclease) (Vsr mismatch endonuclease) n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G657_HERAR Length = 152 Score = 182 bits (462), Expect = 3e-45, Method: Composition-based stats. Identities = 50/118 (42%), Positives = 75/118 (63%), Gaps = 1/118 (0%) Query: 3 DVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIF 62 D+ D TRS+ M I +++T E+ + S L +G +R+ D LPG+PD V+ ++ VIF Sbjct: 2 DIVDSLTRSRMMAGIRSKNTLPERLVRSFLHARGFRYRIHDKKLPGKPDIVLPKHCVVIF 61 Query: 63 THGCFWHHHH-CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 HGCFWH H C P T ++ W++K N ERD+R++ L+ LGWRV+++WEC L Sbjct: 62 IHGCFWHQHPACKNAVKPKTNSQKWIQKFSDNEERDQRNLLALKALGWRVIVLWECGL 119 >UniRef50_B7GPI0 DNA mismatch endonuclease vsr n=12 Tax=cellular organisms RepID=B7GPI0_BIFLI Length = 171 Score = 181 bits (460), Expect = 6e-45, Method: Composition-based stats. Identities = 55/143 (38%), Positives = 79/143 (55%), Gaps = 3/143 (2%) Query: 5 HDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTH 64 +++ TRS M I +DT IE + S L +GL FR D PG PD V+ +Y ++F + Sbjct: 31 YERGTRSYTMSHIRGKDTKIEVLVRSYLFRKGLRFRKNDKRYPGHPDVVLPKYHTIVFVN 90 Query: 65 GCFWHHHH-CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGRE 123 GCFWH H C +P + EFW K+ +N RD + L+ GWRV+ VWEC L + Sbjct: 91 GCFWHMHEGCSKHSMPKSNVEFWQAKLLRNHNRDIAQRAELEAAGWRVITVWECEL--TK 148 Query: 124 KLTDEALTERLEEWICGEGASAQ 146 + DE L E+ + G+ SA+ Sbjct: 149 AVRDERLARLYEQIVEGDADSAE 171 >UniRef50_A3U5P6 DNA mismatch endonuclease Vsr, putative n=1 Tax=Croceibacter atlanticus HTCC2559 RepID=A3U5P6_9FLAO Length = 163 Score = 181 bits (460), Expect = 6e-45, Method: Composition-based stats. Identities = 46/157 (29%), Positives = 72/157 (45%), Gaps = 5/157 (3%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLA-FRVQDASLPGRPDFVVDEYRC 59 M+ + + + +MR ++ T E L L GL +R+ L G PD V + Sbjct: 1 MSLHINSKSVNTSMRGNKSKHTKPELLLRKALWASGLRGYRLHFKKLAGSPDIVFSTKKI 60 Query: 60 VIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 IF +GCFWH +P T TEFW +K N++RD+ + L W VL +WEC + Sbjct: 61 AIFVNGCFWHRCPKCNLNLPKTNTEFWKDKFDTNMKRDQNNYVTLIRSNWTVLTIWECDI 120 Query: 120 RGREKLTDEALTERLEEWICGEGASAQIDTQGIHLLA 156 + K E + ++E I A + + + L A Sbjct: 121 KKNLK---EQVL-KIESLIKDVNAYSITTNEPLQLAA 153 >UniRef50_C7RCX3 DNA mismatch endonuclease Vsr n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RCX3_KANKD Length = 151 Score = 180 bits (457), Expect = 1e-44, Method: Composition-based stats. Identities = 53/150 (35%), Positives = 77/150 (51%), Gaps = 3/150 (2%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M+ K +RS+ M I + DT E ++ + G + ++D +PD V+ + Sbjct: 1 MSSKSGKLSRSEMMSRIRSFDTKPEIKVRKAIYHLGYRYILKDKVKGTKPDIVLRKQGVA 60 Query: 61 IFTHGCFWHHH-HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 IF HGCFWH H C +P TR E+W K+ KNVERDR+ +LQ GWR+ ++WECA Sbjct: 61 IFVHGCFWHRHSGCKYASMPKTRREYWWPKLSKNVERDRKVNFKLQLEGWRIAVIWECAT 120 Query: 120 RGREKLTDEALTERLEEWICGEGASAQIDT 149 R +E E L EWI + + Sbjct: 121 RDKELF--EKTMNSLNEWIQSSSDYYESQS 148 >UniRef50_B8HDH1 DNA mismatch endonuclease Vsr n=4 Tax=Bacteria RepID=B8HDH1_ARTCA Length = 144 Score = 179 bits (455), Expect = 2e-44, Method: Composition-based stats. Identities = 48/136 (35%), Positives = 65/136 (47%), Gaps = 5/136 (3%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDA----SLPGRPDFVVDE 56 MAD RS NM I ++T E + LL +G +R+ A LPG PD V Sbjct: 1 MADRLTPEQRSWNMSRIRGKNTKPELLVRRLLHAKGYRYRLHGAARGGKLPGNPDLVFAG 60 Query: 57 YRCVIFTHGCFWHHHHCYLF-KVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVW 115 VIF +GCFWH H C + P FW +K + ERD +L++ GW VL +W Sbjct: 61 RHKVIFVNGCFWHFHDCRVGQHAPKANAGFWADKRNRTRERDAGQRRQLEDAGWEVLTIW 120 Query: 116 ECALRGREKLTDEALT 131 EC L+ L + + Sbjct: 121 ECELKDSSALESQLVQ 136 >UniRef50_C5APE9 Very-short-patch-repair endonuclease n=1 Tax=Methylobacterium extorquens AM1 RepID=C5APE9_METEA Length = 146 Score = 177 bits (449), Expect = 1e-43, Method: Composition-based stats. Identities = 51/139 (36%), Positives = 71/139 (51%), Gaps = 8/139 (5%) Query: 7 KATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGC 66 R K M AI ++DT E+ + L G FR+ LPGRPD R IF HGC Sbjct: 7 PEARRKIMSAIRSKDTKPERSVRRLAHSLGYRFRLHGKDLPGRPDIFFPGRRKAIFVHGC 66 Query: 67 FWHHHH---CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGRE 123 FWH H C +P TR ++W+ K+ +NV RD R+++ L GW L++WEC L Sbjct: 67 FWHQHPSDECRPSALPRTRRDYWVPKLERNVARDARNMTDLAAAGWDALVIWECELSD-- 124 Query: 124 KLTDEALTERLEEWICGEG 142 EA+ +RL ++ Sbjct: 125 ---LEAVADRLRRFLGDSA 140 >UniRef50_UPI00016AF703 DNA mismatch endonuclease vsr n=2 Tax=pseudomallei group RepID=UPI00016AF703 Length = 146 Score = 176 bits (447), Expect = 2e-43, Method: Composition-based stats. Identities = 54/131 (41%), Positives = 73/131 (55%), Gaps = 6/131 (4%) Query: 11 SKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHH 70 S+ MR I +RDTA E + L G +R+ SLPG PD V R +F HGCFWH Sbjct: 22 SERMRRIRSRDTAPEWIVRRTLWRMGYRYRLHVKSLPGTPDIVFARRRKALFVHGCFWHQ 81 Query: 71 HHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEAL 130 H C L +P T ++W K+ +N+ERD + +L++ GW VL+VWEC E L Sbjct: 82 HGCSLTNLPKTNIDYWHPKLHRNIERDAAAMLQLEKAGWSVLVVWECE------SALEDL 135 Query: 131 TERLEEWICGE 141 ERL ++ GE Sbjct: 136 PERLRLFLDGE 146 >UniRef50_C9PU27 Putative uncharacterized protein n=1 Tax=Prevotella sp. oral taxon 472 str. F0295 RepID=C9PU27_9BACT Length = 159 Score = 175 bits (445), Expect = 3e-43, Method: Composition-based stats. Identities = 48/140 (34%), Positives = 72/140 (51%), Gaps = 2/140 (1%) Query: 14 MRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHH- 72 M ++ ++ T E + L QG +R+ LPG PD V+ +YR IF +GCFWH H Sbjct: 1 MASVKSKGTKPELLVRKFLWAQGFRYRLNSDRLPGHPDLVLRKYRTCIFVNGCFWHGHEG 60 Query: 73 CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREK-LTDEALT 131 C + +P T T FW +K+ +N +RD +L +GW L+VWEC LR R + T +A+ Sbjct: 61 CKRWTLPKTNTPFWEKKVKRNQQRDAETQRQLARMGWHCLVVWECQLRPRHRQATLQAIA 120 Query: 132 ERLEEWICGEGASAQIDTQG 151 L + + Q Sbjct: 121 HTLNHILLTDYQLRYALPQP 140 >UniRef50_C9MXV4 Patch repair protein n=2 Tax=Leptotrichia hofstadii F0254 RepID=C9MXV4_9FUSO Length = 193 Score = 175 bits (443), Expect = 5e-43, Method: Composition-based stats. Identities = 47/130 (36%), Positives = 70/130 (53%), Gaps = 2/130 (1%) Query: 7 KATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGC 66 TRS+NM I +++T E + LL G +RV + LPG PD + +Y IF +GC Sbjct: 36 PLTRSQNMARIKSKNTKPEIYIRKLLYKMGYRYRVNYSELPGTPDIFILKYNTAIFVNGC 95 Query: 67 FWHHH-HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKL 125 FWH H +C + P T E+W +K +NVERD +L E+ V+ +WEC + R + Sbjct: 96 FWHRHENCKVATFPKTHAEYWEKKFRRNVERDIEVREKLFEMDISVITIWECEI-NRMRK 154 Query: 126 TDEALTERLE 135 +E + L Sbjct: 155 NEEYKEKYLR 164 >UniRef50_A2SSP3 T/G mismatch-specific endonuclease n=1 Tax=Methanocorpusculum labreanum Z RepID=A2SSP3_METLZ Length = 151 Score = 174 bits (441), Expect = 8e-43, Method: Composition-based stats. Identities = 51/136 (37%), Positives = 77/136 (56%), Gaps = 1/136 (0%) Query: 3 DVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIF 62 D RS M + ++ T E+ +AS L + +R LPG+PDFV+ +YR VIF Sbjct: 2 DRVTPEHRSWMMSRVRSKKTKPEQLVASYLRESHIGYRRCRTDLPGKPDFVLSKYRAVIF 61 Query: 63 THGCFWHHH-HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRG 121 +GCFWH H C +P T TE+W+ K +N RD R+ ++L+E+GWRV ++WEC L Sbjct: 62 VNGCFWHGHAGCKRATIPKTNTEWWIAKFQQNKLRDERNYAQLREMGWRVFVIWECELGN 121 Query: 122 REKLTDEALTERLEEW 137 + + L + + W Sbjct: 122 DVEYKLKELVKEMLLW 137 >UniRef50_Q1IIN5 T/G mismatch-specific endonuclease n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IIN5_ACIBL Length = 144 Score = 174 bits (441), Expect = 1e-42, Method: Composition-based stats. Identities = 61/135 (45%), Positives = 78/135 (57%), Gaps = 2/135 (1%) Query: 3 DVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIF 62 D KA RS NM I +T E + SLL G FR+ + +LPGRPD + +YR ++ Sbjct: 2 DSLSKARRSWNMSRIRATNTNPELIVRSLLHRLGFRFRLHERTLPGRPDLTLKKYRSIVL 61 Query: 63 THGCFWHHH-HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRG 121 HGCFWH H C P + T FW +K NVERDRR+I L+ LGW+V+IVWEC R Sbjct: 62 VHGCFWHRHAGCPFAYTPKSNTIFWNKKFKANVERDRRNIHELRRLGWKVIIVWECQTRY 121 Query: 122 REKLTDEALTERLEE 136 E+L+ L RL Sbjct: 122 GERLS-RRLESRLRS 135 >UniRef50_A5EB61 T/G mismatch-specific endonuclease n=2 Tax=Bradyrhizobiaceae RepID=A5EB61_BRASB Length = 147 Score = 173 bits (439), Expect = 2e-42, Method: Composition-based stats. Identities = 48/126 (38%), Positives = 67/126 (53%), Gaps = 1/126 (0%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M D + RS M I +DT E R+ ++ GL FR+ L G PD V +++ Sbjct: 1 MMDRLTSSQRSAVMARIQGKDTTPEMRVRTIAHAMGLRFRLHRGDLKGTPDLVFPKHKTA 60 Query: 61 IFTHGCFWHHHH-CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 +F HGCFWH H C +P TR EFW +K+ +NV RD +L GWRV I+WEC Sbjct: 61 LFVHGCFWHRHPGCKRASMPQTREEFWRKKLAQNVARDAEATLQLSSEGWRVQIIWECET 120 Query: 120 RGREKL 125 + ++ Sbjct: 121 KDPAQI 126 >UniRef50_A1A2S3 Possible XorII very-short-patch-repair endonuclease n=10 Tax=Bifidobacterium RepID=A1A2S3_BIFAA Length = 177 Score = 173 bits (439), Expect = 2e-42, Method: Composition-based stats. Identities = 61/151 (40%), Positives = 87/151 (57%), Gaps = 5/151 (3%) Query: 2 ADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVI 61 + +++ TRS M I +DT+IE+ + S L +GL FR D PG PD V+ +YR +I Sbjct: 30 PEKYERGTRSYTMSHIRGKDTSIERMVRSFLFAKGLRFRKNDKRYPGHPDVVLPKYRTII 89 Query: 62 FTHGCFWHHHH-CYLF-KVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 F +GCFWH H C +VP + EFW K+ +N ERD R + L+ GW+V++VWEC L Sbjct: 90 FVNGCFWHMHEGCPKATRVPKSNVEFWTAKLLRNHERDARQRAELEADGWKVIVVWECEL 149 Query: 120 RGREKLTDEALTERLEEWICGEGASAQIDTQ 150 +K+ DE L ERL I + A + Sbjct: 150 --GKKVRDERL-ERLYREIVDDSGKADDSGE 177 >UniRef50_Q027Y0 T/G mismatch-specific endonuclease n=2 Tax=Acidobacteria RepID=Q027Y0_SOLUE Length = 138 Score = 173 bits (438), Expect = 2e-42, Method: Composition-based stats. Identities = 51/123 (41%), Positives = 69/123 (56%), Gaps = 1/123 (0%) Query: 3 DVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIF 62 D RS NMR I +RDT+ E + L+ G FR+ A+LPG+PD V+ + +I Sbjct: 2 DSISPERRSANMRRIRSRDTSPEIAVRRLVHSMGFRFRLHVATLPGKPDIVLPRLKRIIE 61 Query: 63 THGCFWHHHH-CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRG 121 GCFWH H C +P +RTE+W K+ KN RD ++++L GW L VWEC L Sbjct: 62 VRGCFWHQHPGCIDSHIPKSRTEYWESKLTKNQRRDEENLAKLTAAGWTALTVWECQLSD 121 Query: 122 REK 124 EK Sbjct: 122 SEK 124 >UniRef50_B1J232 DNA mismatch endonuclease Vsr n=7 Tax=Bacteria RepID=B1J232_PSEPW Length = 167 Score = 172 bits (437), Expect = 2e-42, Method: Composition-based stats. Identities = 55/124 (44%), Positives = 69/124 (55%), Gaps = 1/124 (0%) Query: 4 VHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFT 63 ++ T S MR I T E + LL GL FR+ SLPG PD V+ + R V+F Sbjct: 22 TMNQFTASDRMRLIKREHTQPELVVRRLLHSMGLRFRLHSKSLPGSPDVVLPKRRTVVFV 81 Query: 64 HGCFWHHHH-CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGR 122 HGC+WH H C P TR +FWL K NVERD R +L+ELGWRV++VWEC + Sbjct: 82 HGCYWHRHPGCRYASTPKTRQDFWLPKFASNVERDNRKAEQLRELGWRVVVVWECETKDV 141 Query: 123 EKLT 126 L Sbjct: 142 MSLD 145 >UniRef50_B5JQD1 DNA mismatch endonuclease Vsr family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JQD1_9BACT Length = 153 Score = 172 bits (437), Expect = 3e-42, Method: Composition-based stats. Identities = 49/148 (33%), Positives = 75/148 (50%), Gaps = 11/148 (7%) Query: 14 MRAIATRDTAIEKRLASLLTGQGLAFRVQ---DASLPGRPDFVVDEYRCVIFTHGCFWHH 70 M + ++ T E+ + SLL G F V + +LPGRPD V+ + VIF HGCFWH Sbjct: 1 MSRVTSKHTKPERLVRSLLHRIGYRFTVNGPKNKNLPGRPDIVLPSRQAVIFVHGCFWHR 60 Query: 71 H-HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEA 129 H C P + T +WL+K +N++RDR+ L +LGW+V+ +WEC L+ + + Sbjct: 61 HTGCKSATTPKSNTSYWLKKFERNIQRDRQTRQALVKLGWQVITIWECELKDLDAVAAHL 120 Query: 130 LTER-------LEEWICGEGASAQIDTQ 150 + L E I + A+ Sbjct: 121 IAALPRSPQFDLPEEIEDDKLVAETQAS 148 >UniRef50_A3ZZ75 Patch repair protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZZ75_9PLAN Length = 146 Score = 172 bits (436), Expect = 4e-42, Method: Composition-based stats. Identities = 50/143 (34%), Positives = 75/143 (52%), Gaps = 5/143 (3%) Query: 2 ADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVI 61 D+ D TRS+ MR + + DT E+ + SL G FR+ LPG PD VI Sbjct: 5 TDIFDPETRSEIMRRVRSSDTRPERIVRSLAHRLGYRFRLGRRDLPGSPDLTFPGRGKVI 64 Query: 62 FTHGCFWHHHHCYLFK--VPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 F HGCFWH H C + +P ++W +K+ +N +RDR+ + L++LGW+ LIVWEC Sbjct: 65 FVHGCFWHQHDCARGRRPLPKQNADYWRKKLSRNQQRDRQTLKSLRKLGWKTLIVWECET 124 Query: 120 RGREKLTDEALTERLEEWICGEG 142 + L ++L ++ Sbjct: 125 KQGN---WPRLAQKLNRFLAASS 144 >UniRef50_C4ZAA5 Very short patch repair endonuclease, putative n=6 Tax=Clostridiales RepID=C4ZAA5_EUBR3 Length = 155 Score = 171 bits (435), Expect = 5e-42, Method: Composition-based stats. Identities = 47/137 (34%), Positives = 67/137 (48%), Gaps = 3/137 (2%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 MADV K R KNM+ I +DT IE L L +G +R LPG PD V+ +Y+ Sbjct: 12 MADVLTKEQRHKNMKNIHGKDTKIEIILRKALWAKGYRYRKNYKKLPGNPDIVLTKYKIA 71 Query: 61 IFTHGCFWHHHHCYLFK---VPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWEC 117 IF G F+H + K + + FW+ KI KN ERD +L +GW V+ W Sbjct: 72 IFCDGEFFHGKDWEVLKPRLQKSNNSAFWVNKISKNRERDDMVNKKLLFMGWTVIRFWGK 131 Query: 118 ALRGREKLTDEALTERL 134 ++ +A+ E + Sbjct: 132 DIKKHTDECVKAIEEII 148 >UniRef50_A0LM24 T/G mismatch-specific endonuclease n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LM24_SYNFM Length = 129 Score = 170 bits (431), Expect = 1e-41, Method: Composition-based stats. Identities = 49/131 (37%), Positives = 70/131 (53%), Gaps = 6/131 (4%) Query: 14 MRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHH-H 72 M I +T E + L G FR+ + LPG+PD V+ +++ IF HGCFWH H Sbjct: 1 MSRIHGTNTKPELEVRRRLHSMGFRFRLHCSKLPGKPDIVLPKHKKAIFVHGCFWHGHQG 60 Query: 73 CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTE 132 C K P++ +FW KI K VERDR + L ELGW+ L +W C ++ E L + Sbjct: 61 CKRSKPPSSNVQFWTAKIAKTVERDRNNRKALVELGWQALTIWSCEIKN-----TEFLEK 115 Query: 133 RLEEWICGEGA 143 RL E++ + Sbjct: 116 RLREFLDDPAS 126 >UniRef50_A4ANX8 Putative very-short-patch-repair endonuclease n=1 Tax=Flavobacteriales bacterium HTCC2170 RepID=A4ANX8_9FLAO Length = 160 Score = 170 bits (430), Expect = 2e-41, Method: Composition-based stats. Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 1/133 (0%) Query: 5 HDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTH 64 + RSK M I ++T E L G +RV L GRPD V+++Y+ V+F Sbjct: 22 YTTPERSKIMSKIRGKNTKPELAFRKALWAIGYRYRVDSRKLIGRPDIVLNKYKTVVFID 81 Query: 65 GCFWHHHHCYLFKVP-ATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGRE 123 G FWH H+ K + +FW+ KI +N +RD L + G++V WE ++ Sbjct: 82 GEFWHGHNWEERKHKIKSNRDFWIAKIERNQQRDAEVNLALGQQGYKVFRFWEHQIKKEL 141 Query: 124 KLTDEALTERLEE 136 + + + L++ Sbjct: 142 DECLQKVIDHLQK 154 >UniRef50_C6BBA5 DNA mismatch endonuclease Vsr n=1 Tax=Ralstonia pickettii 12D RepID=C6BBA5_RALP1 Length = 131 Score = 169 bits (429), Expect = 2e-41, Method: Composition-based stats. Identities = 47/109 (43%), Positives = 57/109 (52%), Gaps = 1/109 (0%) Query: 14 MRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHH- 72 MR + + DT E + S L G FR+ D LPG PD V + IF HGCFWH H Sbjct: 1 MRRVRSADTRPEMVVRSTLHRLGYRFRLHDKRLPGSPDIVFRSRKIAIFVHGCFWHRHPG 60 Query: 73 CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRG 121 C P T TEFW K KN+ RD ++L LGW +VWEC L+ Sbjct: 61 CSRATTPRTNTEFWQCKFNKNIARDTEVCTKLHALGWTTYVVWECELKS 109 >UniRef50_Q2SAF1 DNA G:T-mismatch repair endonuclease n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SAF1_HAHCH Length = 140 Score = 169 bits (428), Expect = 3e-41, Method: Composition-based stats. Identities = 38/135 (28%), Positives = 60/135 (44%), Gaps = 2/135 (1%) Query: 2 ADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVI 61 DV R M I ++T E L L GL +R+Q + GRPD + + + Sbjct: 5 TDVLTPEQRKLCMSKIRGKNTKPELLLRKALWSIGLRYRLQGK-ITGRPDLIFSGPKVAV 63 Query: 62 FTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRG 121 F GCFWH + + P FW EK+ +N+ RD+ L + GW V+ +WE ++ Sbjct: 64 FVDGCFWHGCPEHY-RTPQNNQAFWKEKLRRNMCRDKAVNRILVDNGWLVVRLWEHEVKS 122 Query: 122 REKLTDEALTERLEE 136 + + L + Sbjct: 123 DLECCVSRILAALRK 137 >UniRef50_Q12VT6 DNA mismatch (G:T) repair endonuclease n=1 Tax=Methanococcoides burtonii DSM 6242 RepID=Q12VT6_METBU Length = 150 Score = 167 bits (423), Expect = 1e-40, Method: Composition-based stats. Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 1/136 (0%) Query: 2 ADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGL-AFRVQDASLPGRPDFVVDEYRCV 60 A + S+ M A +DT E L L G+ +R+ +PGRPD + Sbjct: 12 APIPKSKITSRVMSANVGKDTKPELLLRKALRYIGIPGYRLHWKKVPGRPDITYPGGKIA 71 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 IF +GC+WH +P + T+FW EK +N ERD +I L+ GW+++++WEC ++ Sbjct: 72 IFVNGCYWHRCPYCNLPLPKSHTDFWAEKFKRNKERDDENIRLLKAEGWKIIVLWECEIK 131 Query: 121 GREKLTDEALTERLEE 136 E + + + Sbjct: 132 RDVMECAERVRNLVCK 147 >UniRef50_A4L312 V.TspMI n=2 Tax=Thermus RepID=A4L312_9DEIN Length = 138 Score = 166 bits (422), Expect = 2e-40, Method: Composition-based stats. Identities = 47/133 (35%), Positives = 62/133 (46%), Gaps = 1/133 (0%) Query: 3 DVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIF 62 D+ RS+ MR + T T E +L LL G+ +LPGRPD V + + IF Sbjct: 2 DIFTPEKRSELMRKVKTSSTGPEVKLRRLLRVAGIRGYRIKNNLPGRPDVVFPKRKVAIF 61 Query: 63 THGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGR 122 GCFWH K P T EFW KI +N +RD R L GW V+ +WE L+ Sbjct: 62 VDGCFWHGCPVCN-KKPKTNAEFWRRKIKENRQRDARVDELLARQGWSVVRIWEHELKKA 120 Query: 123 EKLTDEALTERLE 135 + + LE Sbjct: 121 PQEAVARVIGALE 133 >UniRef50_C7N4R6 T/G mismatch-specific endonuclease n=3 Tax=Coriobacteriaceae RepID=C7N4R6_SLAHD Length = 146 Score = 166 bits (421), Expect = 2e-40, Method: Composition-based stats. Identities = 43/114 (37%), Positives = 62/114 (54%), Gaps = 2/114 (1%) Query: 11 SKNMRAIATRDTAIEKRLASLLTGQGL-AFRVQDASLPGRPDFVVDEYRCVIFTHGCFWH 69 K+M + ++T E + L GL +RV +PG PD + IF HGCFWH Sbjct: 16 HKSMTSNKGKNTKPELLVRKRLREDGLLGYRVHWK-VPGHPDVAWPGKKVAIFVHGCFWH 74 Query: 70 HHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGRE 123 VP T E+W+ K +NVERDR +I++L+ GWRV ++WEC L+ + Sbjct: 75 RCPHCQLPVPKTNQEYWIPKFERNVERDRENIAKLESDGWRVHVIWECELKKKN 128 >UniRef50_A9ADY1 DNA mismatch endonuclease Vsr n=2 Tax=Burkholderia multivorans ATCC 17616 RepID=A9ADY1_BURM1 Length = 147 Score = 165 bits (419), Expect = 3e-40, Method: Composition-based stats. Identities = 47/134 (35%), Positives = 64/134 (47%), Gaps = 2/134 (1%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 +A K T+S+ M + +R+TA E L L QGL +R+ LPG PD R Sbjct: 12 VAQSSRKLTKSEQMARVRSRNTAPELALRRALWHQGLRYRL-TPKLPGTPDLCFVTKRVA 70 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 IF GCFWH + PA EFW K+ N+ RDR+ + L+ GW V+ VWE L+ Sbjct: 71 IFVDGCFWHGCPQHY-SAPAQNAEFWSHKVASNITRDRKADAALEAEGWTVMRVWEHELK 129 Query: 121 GREKLTDEALTERL 134 + L Sbjct: 130 SHLADVVARIEALL 143 >UniRef50_D2BGG7 Vsr domain protein T:G mismatch repair endonuclease n=1 Tax=Dehalococcoides sp. VS RepID=D2BGG7_DEHSV Length = 138 Score = 165 bits (419), Expect = 3e-40, Method: Composition-based stats. Identities = 44/131 (33%), Positives = 70/131 (53%), Gaps = 2/131 (1%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M D RS M I +DT +E R+ S L QGL FR LPG+PD V + + Sbjct: 1 MPDNLTPEQRSYCMSRIKGKDTGLEMRVRSALHEQGLRFRKNVKWLPGKPDIVFSKAKVA 60 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 +F G FWH + L++ + +FW +KI KN ERD ++ +L+ +GW V+ +W+ ++ Sbjct: 61 VFVDGDFWHGYRFPLWQNKVS--DFWKKKISKNRERDIKNHRKLRRMGWTVIRLWQHEIQ 118 Query: 121 GREKLTDEALT 131 + + E + Sbjct: 119 KNFEASIERIL 129 >UniRef50_C4FAH6 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FAH6_9ACTN Length = 276 Score = 164 bits (416), Expect = 8e-40, Method: Composition-based stats. Identities = 48/135 (35%), Positives = 70/135 (51%), Gaps = 2/135 (1%) Query: 4 VHDKATRSKNMRAIATRDTAIEKRLASLLTGQGL-AFRVQDASLPGRPDFVVDEYRCVIF 62 V +A K+M+ RDT E + L GL +R+ A PGRPD + IF Sbjct: 139 VKRRAAVRKSMQGNKRRDTKPELLVRQRLRAAGLTGYRLDWAKAPGRPDIAFPGRKIAIF 198 Query: 63 THGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR-G 121 +GC+WH +P+ EFW K +NVERD+R ++ L+ELGW + +WEC L+ Sbjct: 199 VNGCYWHRCPHCNPSMPSKNVEFWEAKFRRNVERDKRALAELEELGWCAITIWECELKRD 258 Query: 122 REKLTDEALTERLEE 136 R T E + E + + Sbjct: 259 RIDETMERVIEAIHK 273 >UniRef50_C4RRL0 XorII-short-patch-repair endonuclease n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RRL0_9ACTO Length = 155 Score = 164 bits (416), Expect = 8e-40, Method: Composition-based stats. Identities = 47/137 (34%), Positives = 70/137 (51%), Gaps = 3/137 (2%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGL-AFRVQDASLPGRPDFVVDEYRC 59 M D +A RS+ M AI +++T E L L G+ +R+ ASLPG+PD +R Sbjct: 13 MPDHLSRAGRSRVMAAIRSKNTKPELMLRQALRTSGVTGYRIHLASLPGKPDIAFTRWRL 72 Query: 60 VIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 IF G FWH H + P + +W EKI +N ERD R+ + L +GW VL VW+ + Sbjct: 73 AIFVDGVFWHGHPDHF--KPQLASPYWREKIARNQERDMRNDAALAAIGWTVLRVWDTQV 130 Query: 120 RGREKLTDEALTERLEE 136 + + + + L Sbjct: 131 KEDLGGVTQRVADALRA 147 >UniRef50_C9S232 DNA mismatch endonuclease Vsr n=2 Tax=Geobacillus RepID=C9S232_GEOSY Length = 141 Score = 163 bits (414), Expect = 1e-39, Method: Composition-based stats. Identities = 41/140 (29%), Positives = 76/140 (54%), Gaps = 2/140 (1%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 ++D K RS+ M+AI +R + +E ++ L +G FR D +L G+PD + +Y+ V Sbjct: 4 LSDNLTKEQRSRTMKAIKSR-SQLEDVVSKALWREGYRFRKNDKTLLGKPDISIKKYKVV 62 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 IF CFWH + +P + ++W +K+ +N ERD+ +++GW L +WE L+ Sbjct: 63 IFIDSCFWHGCPLH-GNMPESNRDYWEKKLSRNKERDQEVNDYYRKIGWNCLRIWEHDLK 121 Query: 121 GREKLTDEALTERLEEWICG 140 T + + +++ + G Sbjct: 122 QDFDQTIKQIKNFIDQAMDG 141 >UniRef50_Q8EL90 Very-short-patch-repair endonuclease n=3 Tax=Bacillaceae RepID=Q8EL90_OCEIH Length = 140 Score = 161 bits (409), Expect = 4e-39, Method: Composition-based stats. Identities = 39/135 (28%), Positives = 70/135 (51%), Gaps = 2/135 (1%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M+D+ K RS NM+AI + + +E ++ L +G FR +L G+PD + +Y+ V Sbjct: 1 MSDIMTKQQRSNNMKAIKSV-SKLESIVSKKLWARGFRFRRNTQNLFGKPDISIKKYKIV 59 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 IF CFWH + +P + T++W +K+ +N ERD+ + + GW + +WE ++ Sbjct: 60 IFIDSCFWHQCPLH-ANMPKSHTDYWEKKLERNKERDQEVNNYYSDKGWYLKRIWEHEIK 118 Query: 121 GREKLTDEALTERLE 135 + E + Sbjct: 119 NDIDKVIQDTAEFIT 133 >UniRef50_A4E909 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E909_9ACTN Length = 248 Score = 161 bits (407), Expect = 8e-39, Method: Composition-based stats. Identities = 46/135 (34%), Positives = 66/135 (48%), Gaps = 3/135 (2%) Query: 4 VHDKATRSKNMRAIATRDTAIEKRLASLLTGQGL-AFRVQDASLPGRPDFVVDEYRCVIF 62 V +A K+M+ +T E + L GL +R++ +PG+PD + IF Sbjct: 110 VRRRAAIKKSMKGNKRANTKPELLVRQRLRAAGLTGYRLEWK-VPGKPDIAFPGRKIAIF 168 Query: 63 THGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL-RG 121 +GCFWH P EFW K +NVERDR I+ L ++GW + VWEC L + Sbjct: 169 VNGCFWHRCPKCNPSQPKRNVEFWEAKFRRNVERDRAAINALTQMGWTPITVWECELKKD 228 Query: 122 REKLTDEALTERLEE 136 R T E + ER+ Sbjct: 229 RIDATMEKVIERVRA 243 >UniRef50_C7DGF8 DNA mismatch endonuclease Vsr n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DGF8_9EURY Length = 133 Score = 158 bits (401), Expect = 4e-38, Method: Composition-based stats. Identities = 41/136 (30%), Positives = 65/136 (47%), Gaps = 3/136 (2%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M D + RS NM I +R+T E +L L G + Q + G+PDF + + Sbjct: 1 MTDFLTNSQRSFNMSKIRSRNTVPELKLRRALRKLGFIY--QPKHIFGKPDFANKKSKIA 58 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 +F GCFWH + P T + FW +KI KN+ RDR+ L++ G++V WE + Sbjct: 59 VFIDGCFWHGCPYHYI-TPKTNSAFWSQKIKKNIARDRKVGKTLKKEGYKVFRYWEHTVE 117 Query: 121 GREKLTDEALTERLEE 136 L+ +++ Sbjct: 118 RNPDKILLTLSHAVQK 133 >UniRef50_A6E296 Very short patch repair protein (DNA mismatch endonuclease) n=1 Tax=Roseovarius sp. TM1035 RepID=A6E296_9RHOB Length = 115 Score = 158 bits (400), Expect = 5e-38, Method: Composition-based stats. Identities = 47/115 (40%), Positives = 59/115 (51%), Gaps = 1/115 (0%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M D RSK M + ++D+ E L L +G V LPG PD V R V Sbjct: 1 MTDTVTSEVRSKIMARVRSKDSKAEVTLRKALHARGFRCLVNRRGLPGTPDLVFPRRRAV 60 Query: 61 IFTHGCFWHHHH-CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIV 114 +F H CFW+ H C PAT FW EK +N+ERD R I+ L+ LGWRV +V Sbjct: 61 LFVHVCFWYRHDECRKATTPATNEAFWTEKFKRNIERDARKIAELEALGWRVEVV 115 >UniRef50_D1A867 DNA mismatch endonuclease Vsr n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1A867_THECD Length = 167 Score = 158 bits (399), Expect = 7e-38, Method: Composition-based stats. Identities = 43/116 (37%), Positives = 56/116 (48%), Gaps = 6/116 (5%) Query: 7 KATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDA-SLPG----RPDFVVDEYRCVI 61 RS+NMRA +T E L S L G +R LPG RPD V + I Sbjct: 24 NEGRSRNMRANRRSNTKPEVALRSALHALGYRYRKDYRLDLPGGFRVRPDIVFTARKVAI 83 Query: 62 FTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWEC 117 F GCFWH + + P T +W K+ +NVERDR L+ GW+V+ +WE Sbjct: 84 FVDGCFWHVCPEH-GRQPTTNEWYWAPKLRRNVERDRLANRALEAAGWKVVRLWEH 138 >UniRef50_C8WJH8 DNA mismatch endonuclease Vsr n=2 Tax=Coriobacteriaceae RepID=C8WJH8_EGGLE Length = 190 Score = 157 bits (398), Expect = 8e-38, Method: Composition-based stats. Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 2/118 (1%) Query: 6 DKATRSKNMRAIATRDTAIEKRLASLLTGQGL-AFRVQDASLPGRPDFVVDEYRCVIFTH 64 K+M+ +T E + L GL +R+Q +PG PD R +F + Sbjct: 50 SNEAVRKSMKGNKRSNTKPELLVRERLRAAGLTGYRLQWK-VPGHPDVAWPGKRVALFVN 108 Query: 65 GCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGR 122 GCFWH +P + E+W+ K +NVERD R + L+ELGW V ++WEC L+ + Sbjct: 109 GCFWHRCPHCKPSMPKSNVEYWVVKFERNVERDERSRAALEELGWTVHVIWECQLKKK 166 >UniRef50_C8VVT5 DNA mismatch endonuclease Vsr n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VVT5_DESAS Length = 150 Score = 157 bits (398), Expect = 1e-37, Method: Composition-based stats. Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 6/123 (4%) Query: 5 HDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTH 64 D K M ++ ++DT E L L G GL +R+ +PG+PD V + R +F Sbjct: 3 RDPQITHKIMSSVKSKDTRPEIALRKALWGMGLRYRINYKQIPGKPDVVFTKARIAVFCD 62 Query: 65 GCFWHHHHCYLFKVPATR------TEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECA 118 G +WH H+ + + + +EFW KI N+ RD + L +GW V+ VWE Sbjct: 63 GDYWHGHNWAIRGLKSLDEELSHYSEFWSNKIRGNINRDETVNNELTNMGWHVIRVWESD 122 Query: 119 LRG 121 ++ Sbjct: 123 IKA 125 >UniRef50_Q1D6D6 Very short patch repair protein n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1D6D6_MYXXD Length = 182 Score = 157 bits (397), Expect = 1e-37, Method: Composition-based stats. Identities = 52/136 (38%), Positives = 70/136 (51%), Gaps = 3/136 (2%) Query: 9 TRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFW 68 +RS+ M I RDT+ E+ L S L GL FR+ + GRPD V ++ +F GCFW Sbjct: 4 SRSEQMSRIRGRDTSPERLLRSALWRAGLRFRLHTRTTHGRPDVVFPRHKVAVFIDGCFW 63 Query: 69 HHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDE 128 H + + P TR EFW K+ +NVERDRR L+E GWRV WE + E Sbjct: 64 HGCPKHYVR-PRTRDEFWSSKLRENVERDRRQTLLLEEGGWRVCRFWEHQIFESLAEVVE 122 Query: 129 ALTERLE--EWICGEG 142 + + L+ EW Sbjct: 123 WVRQALQDGEWTPSAS 138 >UniRef50_B0TCI0 DNA mismatch endonuclease vsr, putative n=5 Tax=Clostridiales RepID=B0TCI0_HELMI Length = 153 Score = 156 bits (396), Expect = 2e-37, Method: Composition-based stats. Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 1/137 (0%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M + R NM I +++T IE L +G+ +R LPG+PD + +Y+ Sbjct: 1 MVHRTQEEQRHYNMSRIRSKNTRIETVFRKALWREGINYRKNYQLLPGKPDIAITKYKIA 60 Query: 61 IFTHGCFWHHHHCYLFKVP-ATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 IF G FWH + K ++W++KI KN+ERD +L+ +GWRVL W + Sbjct: 61 IFCDGEFWHGKDWEIKKPKIKNNRDYWIQKIEKNMERDIEIDQQLKSMGWRVLRFWGRDI 120 Query: 120 RGREKLTDEALTERLEE 136 + + + E + + Sbjct: 121 VKNLEDCIKTVKETIFQ 137 >UniRef50_UPI0001968FCC hypothetical protein BACCELL_03936 n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=UPI0001968FCC Length = 150 Score = 156 bits (395), Expect = 2e-37, Method: Composition-based stats. Identities = 45/135 (33%), Positives = 61/135 (45%), Gaps = 1/135 (0%) Query: 3 DVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIF 62 D K RSKNM+AI + T E LA L GL +R D S+ G+PD Y+ IF Sbjct: 2 DKLTKEQRSKNMQAIKNKGTKDEVLLAKKLWHIGLRYRKNDNSVFGKPDLTFKRYKIAIF 61 Query: 63 THGCFWHHHHCYLFKVP-ATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRG 121 F+H K + EFW KI +N+ RD L+ GW+V+ W ++R Sbjct: 62 IDSEFFHGKDWETEKYKIKSNREFWWPKIERNITRDITVNQVLENAGWKVIRFWSKSMRK 121 Query: 122 REKLTDEALTERLEE 136 E + L E Sbjct: 122 NINACVETIMHILIE 136 >UniRef50_A1K2B8 Putative hypothetical very short patch repair endonuclease n=1 Tax=Azoarcus sp. BH72 RepID=A1K2B8_AZOSB Length = 129 Score = 156 bits (394), Expect = 3e-37, Method: Composition-based stats. Identities = 39/122 (31%), Positives = 54/122 (44%), Gaps = 1/122 (0%) Query: 13 NMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHH 72 M I RDT E L + GL +R+Q RPD V R +F GCFWH Sbjct: 1 MMSRIKGRDTGPELSLRRNIWALGLRYRLQYRIGRTRPDMVFVRARLAVFVDGCFWHGCP 60 Query: 73 CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTE 132 + +P +FW K+ +N ERD + L+ GWRVL +WE ++ + Sbjct: 61 QH-STMPKNNRDFWERKLRRNRERDAENTHSLEAEGWRVLRLWEHEIQASPADCARRIAV 119 Query: 133 RL 134 L Sbjct: 120 ML 121 >UniRef50_D1WVX3 DNA mismatch endonuclease Vsr n=1 Tax=Streptomyces sp. ACT-1 RepID=D1WVX3_9ACTO Length = 272 Score = 155 bits (393), Expect = 3e-37, Method: Composition-based stats. Identities = 51/143 (35%), Positives = 61/143 (42%), Gaps = 9/143 (6%) Query: 11 SKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLP---GRPDFVVDEYRCVIFTHGCF 67 MRA +DT E L LL GL +RV +P R D V R +F GCF Sbjct: 131 RAVMRANRRKDTGPELALRRLLHASGLRYRVDARPVPEVRRRADLVFPGARVAVFVDGCF 190 Query: 68 WHHHHCYLFKVPAT-RTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLT 126 WH C PAT EFW EKI N RDR L+ GW V+ VWE + Sbjct: 191 WHG--CPEHYRPATRNAEFWREKIEGNRNRDRETNETLRAAGWSVVRVWEHE---APETA 245 Query: 127 DEALTERLEEWICGEGASAQIDT 149 E ++ + G G SA T Sbjct: 246 AELVSREVRAQRLGTGPSASFAT 268 >UniRef50_C0EI85 Putative uncharacterized protein n=2 Tax=Clostridium RepID=C0EI85_9CLOT Length = 141 Score = 155 bits (393), Expect = 4e-37, Method: Composition-based stats. Identities = 42/124 (33%), Positives = 65/124 (52%), Gaps = 2/124 (1%) Query: 1 MADVHDKATRSKNMRAIATRDTA-IEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRC 59 MADV DK TRS M+ + + E RL +L G+ ++ + G PDFV + Sbjct: 1 MADVFDKETRSSIMKKVHSAGNKSTEMRLITLFQENGITGWRRNYKVKGHPDFVFLNKKI 60 Query: 60 VIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 IF GCFWH H C + P ++W +K +N++RD+ + + GW V+ +WEC L Sbjct: 61 AIFVDGCFWHGHDCRNTR-PKDNEDYWKKKRERNIKRDKEVTALFESRGWTVIRIWECEL 119 Query: 120 RGRE 123 + + Sbjct: 120 KKKN 123 >UniRef50_P50186 NaeI very short patch repair endonuclease n=2 Tax=Actinomycetales RepID=VSN1_NOCAE Length = 166 Score = 154 bits (391), Expect = 6e-37, Method: Composition-based stats. Identities = 42/117 (35%), Positives = 53/117 (45%), Gaps = 6/117 (5%) Query: 7 KATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPG-----RPDFVVDEYRCVI 61 A RS+NM+A T E L S L G +R G +PD V + + Sbjct: 25 NAGRSRNMQANRRSGTKPEAALRSALFKLGYRYRKDFLLRLGDGVKVKPDIVFTARKVAV 84 Query: 62 FTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECA 118 F GCFWH + + P T +W K+ +NVERDR L GWRVL VWE Sbjct: 85 FIDGCFWHVCPDH-GRQPTTNEWYWSPKLRRNVERDRTVNQSLTNAGWRVLRVWEHE 140 >UniRef50_C9N7G6 DNA mismatch endonuclease Vsr n=5 Tax=Actinomycetales RepID=C9N7G6_9ACTO Length = 170 Score = 153 bits (387), Expect = 2e-36, Method: Composition-based stats. Identities = 44/115 (38%), Positives = 58/115 (50%), Gaps = 4/115 (3%) Query: 6 DKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPG---RPDFVVDEYRCVIF 62 A ++M +RDTA E L SL+ GL +RV LP D V + +F Sbjct: 29 SSAANRRSMLGNRSRDTAPELLLRSLVHAAGLRYRVAAKPLPKMRRTADMVFRPAKVAVF 88 Query: 63 THGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWEC 117 GCFWH + F +P T +W +KIG+NV+RDR RL + GW VL WE Sbjct: 89 IDGCFWHGCPDH-FVMPKTNRPYWEDKIGRNVQRDRDTDQRLADEGWLVLRFWEH 142 >UniRef50_Q20YF6 DNA mismatch endonuclease vsr n=1 Tax=Rhodopseudomonas palustris BisB18 RepID=Q20YF6_RHOPB Length = 105 Score = 153 bits (387), Expect = 2e-36, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 53/97 (54%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M D A RS+ M A+ ++T E + L G FR+ ++LPG PD ++ YR Sbjct: 1 MTDNVSPAVRSRIMAAVNNKNTKPEIAVRRALHAAGYRFRLHRSNLPGHPDLILPGYRTE 60 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERD 97 IF HGC+WH H C ++P++ +F KI + + RD Sbjct: 61 IFVHGCYWHGHSCRRRRLPSSNVQFLEAKISRTIGRD 97 >UniRef50_C7V3C2 Putative uncharacterized protein n=1 Tax=Enterococcus faecalis T11 RepID=C7V3C2_ENTFA Length = 145 Score = 153 bits (387), Expect = 2e-36, Method: Composition-based stats. Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 2/113 (1%) Query: 6 DKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHG 65 K RSK M I + E LA + +G + LPG+PD + +Y+ IF G Sbjct: 4 TKEYRSKMMSKIRSTGGKAETLLAKRIWHEGYRYFRNYKKLPGKPDIAITKYKIAIFVDG 63 Query: 66 CFWHHHHCYLFKVPA--TRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWE 116 FWH + K+ T ++W+ KI KN+ +D++ L+ +GW V+ WE Sbjct: 64 EFWHGYDWDNQKLKRIHTNRDYWIPKIEKNMAKDKQVNEELRNMGWIVIRFWE 116 >UniRef50_A0RY33 DNA G/T mismatch repair endonuclease n=1 Tax=Cenarchaeum symbiosum RepID=A0RY33_CENSY Length = 157 Score = 153 bits (386), Expect = 2e-36, Method: Composition-based stats. Identities = 42/136 (30%), Positives = 61/136 (44%), Gaps = 3/136 (2%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M DV RS M I ++ T I+ ++ +LT G+ F + +PG PDF Sbjct: 1 MTDVFTPEKRSWVMSRIRSKGTGIDIKMKEILTHTGIKFEM-YPQIPGNPDFASRRLGIT 59 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 +F G FWH + K+P +FW KI N+ERD L+ GW VL WE + Sbjct: 60 VFCDGDFWHGYDYRRGKIPK--KQFWRNKIECNMERDLYVSGMLRSNGWSVLRFWEHDID 117 Query: 121 GREKLTDEALTERLEE 136 G + ++ E Sbjct: 118 GNPDKCSGKIQRKIRE 133 >UniRef50_Q04A40 T/G mismatch-specific endonuclease n=3 Tax=Bacteria RepID=Q04A40_LACDB Length = 140 Score = 153 bits (386), Expect = 2e-36, Method: Composition-based stats. Identities = 33/122 (27%), Positives = 62/122 (50%), Gaps = 1/122 (0%) Query: 11 SKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHH 70 SK M + + + E + +L G+ +R LPG+PD + +Y+ +F G FWH Sbjct: 12 SKRMSKVHSTEGKDEVIIRKILWKNGIHYRKNYKDLPGKPDIALTKYKVAVFIDGEFWHG 71 Query: 71 HHCYLFKV-PATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEA 129 + +K + ++W+ KI +N++RD+ ++L+E+GW VL W + + E Sbjct: 72 YDWENYKKHIESNRDYWIPKIERNMKRDQEVNAKLKEMGWTVLRFWSKQVLKNPEYYAEL 131 Query: 130 LT 131 + Sbjct: 132 IM 133 >UniRef50_D0L6H5 DNA mismatch endonuclease Vsr n=1 Tax=Gordonia bronchialis DSM 43247 RepID=D0L6H5_GORB4 Length = 144 Score = 152 bits (384), Expect = 4e-36, Method: Composition-based stats. Identities = 44/118 (37%), Positives = 64/118 (54%), Gaps = 5/118 (4%) Query: 4 VHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDA-SLPGR---PDFVVDEYRC 59 V ATRS+NM A+ +T+ E+ + S+L +G +R + GR PD V + R Sbjct: 11 VAPSATRSRNMAAVRRSETSPERAIRSVLHCRGFRYRKDYPIRVDGRLIRPDIVFTKKRV 70 Query: 60 VIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWEC 117 +F GCFWH + ++PAT T+FW K+ +N ERD L+ GW V+ VWE Sbjct: 71 AVFVDGCFWHLCPLH-GQIPATNTDFWRRKLERNAERDLEQTRALEGSGWTVVRVWEH 127 >UniRef50_B8G3L1 DNA mismatch endonuclease Vsr n=1 Tax=Chloroflexus aggregans DSM 9485 RepID=B8G3L1_CHLAD Length = 138 Score = 151 bits (382), Expect = 7e-36, Method: Composition-based stats. Identities = 45/126 (35%), Positives = 66/126 (52%), Gaps = 1/126 (0%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLA-FRVQDASLPGRPDFVVDEYRC 59 M+D R K M+A+ + T +EKRL ++L G GL ++ ++ G+PD R Sbjct: 1 MSDNLSPQDRHKTMQAVKGKGTRLEKRLWAMLAGLGLKGWKKNADNIVGKPDVAFLNQRI 60 Query: 60 VIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 IF GCFWH K+P T E+W KI +N+E R +LQ GW V+ +WE + Sbjct: 61 AIFIDGCFWHGCPYCKRKLPKTNREYWERKINRNIELARLHDEQLQREGWIVIRIWEHEM 120 Query: 120 RGREKL 125 EK+ Sbjct: 121 ADIEKV 126 >UniRef50_UPI0001BCE75A DNA mismatch endonuclease Vsr n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCE75A Length = 123 Score = 151 bits (381), Expect = 9e-36, Method: Composition-based stats. Identities = 45/123 (36%), Positives = 59/123 (47%), Gaps = 6/123 (4%) Query: 14 MRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWH--HH 71 MR + +DT E L L +G+ +R +LPG PD V+ + IF G FWH H Sbjct: 1 MRRVRAKDTKPEIALRKGLWKRGVRYRKNVRALPGTPDIVLAGRKIAIFVDGDFWHARGH 60 Query: 72 HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVW----ECALRGREKLTD 127 + A+ FW K+ +NVERDR L E+GW VL W E L G + D Sbjct: 61 RENPGEEVASNQSFWRAKLARNVERDREVNDSLTEMGWLVLRFWTSDIEKDLAGVLAVID 120 Query: 128 EAL 130 E L Sbjct: 121 EYL 123 >UniRef50_A1SJ03 T/G mismatch-specific endonuclease n=1 Tax=Nocardioides sp. JS614 RepID=A1SJ03_NOCSJ Length = 153 Score = 150 bits (379), Expect = 2e-35, Method: Composition-based stats. Identities = 42/140 (30%), Positives = 63/140 (45%), Gaps = 8/140 (5%) Query: 5 HDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTH 64 D A S+ M A+ +DT E L + +G +R+ +PGRPD VV + IF Sbjct: 12 RDPAVTSRIMSAVRAKDTKPELLLRRAVHARGGRYRLHAPDVPGRPDLVVRGKKIAIFVD 71 Query: 65 GCFWHHHHCYLFKVPA--------TRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWE 116 G WH + + TRT++W++KI +NV RD+ L GWRVL +W Sbjct: 72 GDLWHGNPAEWRRRGKDDLAGLFPTRTQWWVDKIERNVRRDQDVDRELAARGWRVLRLWA 131 Query: 117 CALRGREKLTDEALTERLEE 136 + + + L E Sbjct: 132 SDIIADPDAAADRVIIALRE 151 >UniRef50_P36434 HpaII very short patch repair endonuclease n=1 Tax=Haemophilus parainfluenzae RepID=VSH2_HAEPA Length = 141 Score = 150 bits (379), Expect = 2e-35, Method: Composition-based stats. Identities = 42/137 (30%), Positives = 60/137 (43%), Gaps = 4/137 (2%) Query: 3 DVHDKATRSKNMRAI-ATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVI 61 D R K M+A + T E LA L GL +R D S+ G PD Y+ I Sbjct: 2 DKLTPEQRKKCMKASSKNKGTKPELLLAKYLWALGLRYRKNDRSIFGTPDLSFKRYKIAI 61 Query: 62 FTHGCFWHHHHCYLFKV-PATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECA-L 119 F G FWH + K + +FW+ KI N+ RD++ L GW + W L Sbjct: 62 FIDGEFWHGKDWDIRKYDIKSNKDFWISKIEHNMNRDKKVNDYLISNGWVIFRFWGKDVL 121 Query: 120 RGREKLTDEALTERLEE 136 + EK + E + + + E Sbjct: 122 KNPEKFSLE-IQKAIYE 137 >UniRef50_C6D8V0 DNA mismatch endonuclease Vsr n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8V0_PAESJ Length = 147 Score = 149 bits (378), Expect = 2e-35, Method: Composition-based stats. Identities = 39/128 (30%), Positives = 67/128 (52%), Gaps = 1/128 (0%) Query: 3 DVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIF 62 D++ +S M + +++T +E+ ++ L +G FR SL GRPD V +Y+ VIF Sbjct: 2 DINKTNLKSNFMGRVKSKNTKLEQSVSKALWRKGFRFRKNVLSLYGRPDIAVKKYKLVIF 61 Query: 63 THGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGR 122 CFWH FK+P+ +++W+ KI +N ERD + W ++ +WE L+ Sbjct: 62 IDSCFWHGCE-RHFKLPSKNSDYWMNKISRNRERDLEVTQYYVDNNWILIRIWEHDLKAN 120 Query: 123 EKLTDEAL 130 ++ L Sbjct: 121 FEIVIIKL 128 >UniRef50_Q2IF54 T/G mismatch-specific endonuclease n=1 Tax=Anaeromyxobacter dehalogenans 2CP-C RepID=Q2IF54_ANADE Length = 148 Score = 149 bits (376), Expect = 3e-35, Method: Composition-based stats. Identities = 47/130 (36%), Positives = 63/130 (48%), Gaps = 1/130 (0%) Query: 8 ATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCF 67 SK + + RDT E + +L G G +R LPG PD V R +F HGCF Sbjct: 16 EATSKRLGRVRQRDTGPELIVRRMLHGLGGRYRRSSKKLPGSPDIVNWSRRWAVFVHGCF 75 Query: 68 WHHH-HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLT 126 WH H C VP FWL K+ N RD R I+ L+ LG+R +++WEC + R Sbjct: 76 WHWHNDCGRASVPKRNRAFWLAKLNANRRRDCRVIADLEALGFRTMVLWECEIEERPLDV 135 Query: 127 DEALTERLEE 136 + L+ L Sbjct: 136 ERKLSRFLAR 145 >UniRef50_A1UB42 DNA mismatch endonuclease vsr n=4 Tax=Actinomycetales RepID=A1UB42_MYCSK Length = 133 Score = 149 bits (376), Expect = 3e-35, Method: Composition-based stats. Identities = 40/112 (35%), Positives = 53/112 (47%), Gaps = 4/112 (3%) Query: 10 RSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGR---PDFVVDEYRCVIFTHGC 66 S+ M A +++T IE RL S L +GL +R+ LP D V + ++ GC Sbjct: 1 MSRRMSAQLSQNTGIEMRLRSALHARGLRYRLHQRPLPQHRRTADIVFRRAKVAVYVDGC 60 Query: 67 FWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECA 118 FWH + P EFW KI NV RDR + L E GW + VWE Sbjct: 61 FWHGCPEH-ATWPKRNAEFWRNKIEANVRRDRETDTSLIEAGWTPVRVWEHE 111 >UniRef50_UPI0001B4F16E very short patch repair protein n=1 Tax=Streptomyces griseoflavus Tu4000 RepID=UPI0001B4F16E Length = 150 Score = 148 bits (374), Expect = 5e-35, Method: Composition-based stats. Identities = 44/107 (41%), Positives = 54/107 (50%), Gaps = 4/107 (3%) Query: 14 MRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPG---RPDFVVDEYRCVIFTHGCFWHH 70 M RDTA E L SL+ GL +RV LP D V + +F GCFWH Sbjct: 1 MLGNRNRDTAPELLLRSLVHAAGLRYRVAAKPLPKMRRTADMVFRPVKVAVFIDGCFWHG 60 Query: 71 HHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWEC 117 + F +P T +W +KIG+NV+RDR RL E GW VL WE Sbjct: 61 CPEH-FVMPKTNRPYWEDKIGRNVQRDRDTDDRLSEAGWLVLRFWEH 106 >UniRef50_C7XVZ3 Short-patch-repair endonuclease n=1 Tax=Lactobacillus coleohominis 101-4-CHN RepID=C7XVZ3_9LACO Length = 142 Score = 147 bits (371), Expect = 1e-34, Method: Composition-based stats. Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 3/114 (2%) Query: 6 DKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHG 65 RSK M I + E L + +G+ + LPG+PD + +Y+ +F G Sbjct: 3 TTEYRSKMMSKIRSTGGKAETILGKAIWHKGIRYFRNYKKLPGKPDLAITKYKIAVFVDG 62 Query: 66 CFWHHHHCYLFKVPA---TRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWE 116 +WH ++ K ++WL+KI N+E DR+ L+++GW V+ WE Sbjct: 63 EYWHGYNYDEIKSGKRVHRNRQYWLKKINYNMEHDRKVNDELKKMGWTVIRFWE 116 >UniRef50_A1W7Y7 Putative very short patch repair protein n=3 Tax=Burkholderiales RepID=A1W7Y7_ACISJ Length = 152 Score = 147 bits (371), Expect = 1e-34, Method: Composition-based stats. Identities = 39/116 (33%), Positives = 49/116 (42%), Gaps = 4/116 (3%) Query: 6 DKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASL--PGR-PDFVVDEYRCVIF 62 S+ M + + T E L L +GL +R+ L P R D R +F Sbjct: 7 SSPETSRRMAKVRQKGTDAEIALRRELYRRGLRYRIDYEVLKKPRRVADVAFPGLRIAVF 66 Query: 63 THGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECA 118 GCFWH + P EFW +KI N RD SRL E+GW VL WE Sbjct: 67 VDGCFWHGCPEH-ATWPKQNAEFWRQKIETNRLRDADTNSRLLEVGWTVLRFWEHE 121 >UniRef50_A5CSG2 Putative patch repair endonuclease n=1 Tax=Clavibacter michiganensis subsp. michiganensis NCPPB 382 RepID=A5CSG2_CLAM3 Length = 154 Score = 146 bits (370), Expect = 2e-34, Method: Composition-based stats. Identities = 38/115 (33%), Positives = 56/115 (48%), Gaps = 4/115 (3%) Query: 6 DKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLP---GRPDFVVDEYRCVIF 62 T + MR+ RDTA E + +L +G+ +RV + R D R +F Sbjct: 5 SSDTSRRVMRSNMRRDTAPELAVRRILHAKGMRYRVDFRVVRETRSRADIAFTRQRIAVF 64 Query: 63 THGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWEC 117 GCFWH +L +P ++W+ K+ +NVERD + L+ LGW VL WE Sbjct: 65 IDGCFWHSCPEHLH-LPKANADYWIPKLARNVERDAEVAAVLRGLGWTVLRFWEH 118 >UniRef50_B3Q989 DNA mismatch endonuclease Vsr n=4 Tax=Rhodopseudomonas palustris RepID=B3Q989_RHOPT Length = 138 Score = 146 bits (368), Expect = 3e-34, Method: Composition-based stats. Identities = 46/124 (37%), Positives = 58/124 (46%), Gaps = 1/124 (0%) Query: 6 DKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHG 65 RS MR + T E +A++L GL FR SLPG PDF + IF HG Sbjct: 10 TDPARSALMRRVRQTGTKAEDEVAAILRQSGLRFRRNVKSLPGSPDFANKTNQWAIFVHG 69 Query: 66 CFWHHHH-CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREK 124 CFWH H C P +FWL K NV RD L+ +G++VL +WEC R Sbjct: 70 CFWHRHEGCPRTTTPTRNRDFWLAKFAANVNRDTIKARLLRAMGFKVLTIWECETRNPSN 129 Query: 125 LTDE 128 + Sbjct: 130 VRRR 133 >UniRef50_B5HK48 Putative uncharacterized protein n=3 Tax=Streptomyces RepID=B5HK48_STRPR Length = 152 Score = 145 bits (366), Expect = 5e-34, Method: Composition-based stats. Identities = 43/140 (30%), Positives = 56/140 (40%), Gaps = 13/140 (9%) Query: 4 VHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRP----DFVVDEYRC 59 V S M A RDT E + LL GL +R+Q +PG D R Sbjct: 7 VPSSTGVSARMSRQARRDTDPEMAVRRLLYAAGLRYRLQRR-VPGMARRTIDIAFPGLRI 65 Query: 60 VIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 +F GCFWH + P +W EK+ KN+ RD L++ GW VL WE Sbjct: 66 AVFMDGCFWHGCPQH-ATSPKANASWWREKLDKNIARDIETTKHLEDAGWVVLRFWEHE- 123 Query: 120 RGREKLTDEALTERLEEWIC 139 T + R+ E I Sbjct: 124 ------TPAQVANRIAEEID 137 >UniRef50_UPI00016A6F51 putative very short patch repair protein n=2 Tax=pseudomallei group RepID=UPI00016A6F51 Length = 148 Score = 144 bits (365), Expect = 6e-34, Method: Composition-based stats. Identities = 41/115 (35%), Positives = 56/115 (48%), Gaps = 4/115 (3%) Query: 6 DKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGR---PDFVVDEYRCVIF 62 S+ M +D E+ L S L QG+ FR+ A++PG D R +F Sbjct: 4 SPNATSRRMARTVGKDNPRERALRSALHRQGIRFRIHYAAIPGTRRSIDIAFTRLRLAVF 63 Query: 63 THGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWEC 117 GCFWH + +P TR E+W+EKI N RDR +RL GW V+ +WE Sbjct: 64 CDGCFWHGCPAH-ATIPKTRREWWVEKIMANKIRDRDTDARLINSGWTVMRIWEH 117 >UniRef50_C0ABV7 DNA G:T-mismatch repair endonuclease n=2 Tax=Verrucomicrobia RepID=C0ABV7_9BACT Length = 142 Score = 144 bits (364), Expect = 8e-34, Method: Composition-based stats. Identities = 44/129 (34%), Positives = 60/129 (46%), Gaps = 7/129 (5%) Query: 1 MADVHDKATRSKNMRAIATRDTA-IEKRLASLLTGQGLAFRVQDASLPGRPDFVVDE--- 56 M+DV KA RS M I E RL ++ G+ + ++ G+PDFV + Sbjct: 1 MSDVFTKAKRSAVMARIRGSGNKDTELRLIAIFRENGITGWRRKQTVLGKPDFVFRKPHS 60 Query: 57 --YRCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIV 114 R +F GCFWH + P EFWL KI +N RD+ L+ GWRVL + Sbjct: 61 GMKRLAVFVDGCFWHGCPLH-GTQPKNNAEFWLAKIARNQTRDQLVTRTLRARGWRVLRI 119 Query: 115 WECALRGRE 123 WE L + Sbjct: 120 WEHELARKN 128 >UniRef50_D1S9Q4 DNA mismatch endonuclease Vsr n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1S9Q4_9ACTO Length = 165 Score = 143 bits (360), Expect = 3e-33, Method: Composition-based stats. Identities = 38/111 (34%), Positives = 49/111 (44%), Gaps = 3/111 (2%) Query: 11 SKNMRAIATRDTAIEKRLASLLTGQGLAFRVQD---ASLPGRPDFVVDEYRCVIFTHGCF 67 M+ TRDT E + LL GL +RV SL R D V R +F GCF Sbjct: 31 RGRMQRQRTRDTQPELAIRRLLHAAGLRYRVDVAPTRSLRRRADIVFGPARVAVFVDGCF 90 Query: 68 WHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECA 118 WH + + T T++W K+ +N RD L GW V+ VWE Sbjct: 91 WHGCPQHGSRKTKTNTDYWSGKVARNQARDTATDGLLTNDGWLVIRVWEHE 141 >UniRef50_A6BKR1 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BKR1_9FIRM Length = 153 Score = 141 bits (357), Expect = 5e-33, Method: Composition-based stats. Identities = 36/128 (28%), Positives = 53/128 (41%), Gaps = 1/128 (0%) Query: 6 DKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHG 65 SK M + + E LA L +G +++ D +LPG PD + Y IF G Sbjct: 9 TDEATSKRMSNVKLKKGTAEMLLAKELWHKGFRYQLNDKTLPGSPDIAIRRYNIAIFVDG 68 Query: 66 CFWHHHHCYLFKVP-ATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREK 124 FWH + K E+W+EKI +N+ RD R L GW + W + Sbjct: 69 EFWHGYDWDNKKPKLKRNREYWIEKIEENMARDTRVDKELLVKGWVPIHFWTKEVLKETA 128 Query: 125 LTDEALTE 132 + + E Sbjct: 129 SCVQVVQE 136 >UniRef50_D1SGS2 DNA mismatch endonuclease Vsr n=2 Tax=Actinomycetales RepID=D1SGS2_9ACTO Length = 145 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 32/111 (28%), Positives = 46/111 (41%), Gaps = 4/111 (3%) Query: 11 SKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPG---RPDFVVDEYRCVIFTHGCF 67 K+M+A RDT E L + GL + V + D + + +F GCF Sbjct: 13 RKSMQANTGRDTKPELALRRAVHALGLRYYVNRRPIKAVRRTADLLFPRLKLAVFLDGCF 72 Query: 68 WHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECA 118 WH + + T FW +K+ N RD RL GW V+ +WE Sbjct: 73 WHGCPEH-HTIAKTNAAFWSQKVATNRRRDVDTNERLTAAGWTVIRIWEHE 122 >UniRef50_D0LEE5 DNA mismatch endonuclease Vsr n=2 Tax=Actinomycetales RepID=D0LEE5_GORB4 Length = 155 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 43/117 (36%), Positives = 52/117 (44%), Gaps = 6/117 (5%) Query: 6 DKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLP----GRPDFVVDEYRCVI 61 A R +MR RDT E + LL GL +RV A LP R D V R + Sbjct: 11 SPAAR-ASMRGNRRRDTRPELEVRRLLHAMGLRYRVDLAPLPESRRNRADIVFIRARVAV 69 Query: 62 FTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECA 118 F GC+WH + + FW KI N ERDRR + L+ GW VL WE Sbjct: 70 FIDGCYWHKCPDHY-RPARRNANFWSAKIEGNRERDRRVTAMLEGAGWTVLRFWEHE 125 >UniRef50_UPI0001B50D9E putative DNA mismatch endonuclease n=1 Tax=Streptomyces viridochromogenes DSM 40736 RepID=UPI0001B50D9E Length = 154 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 43/113 (38%), Positives = 54/113 (47%), Gaps = 5/113 (4%) Query: 10 RSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDA-SLPG---RPDFVVDEYRCVIFTHG 65 RS+NM AI RDT E+ + SLL G +RV L G RPD R +F G Sbjct: 17 RSRNMAAIKRRDTKPERTIRSLLHAAGKRYRVDYRLQLEGARPRPDIAFTRARVAVFVDG 76 Query: 66 CFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECA 118 CFWH + + P +W K+ +NV RDR L GW V+ VWE Sbjct: 77 CFWHCCPEH-GRQPGVNGGYWGPKLERNVARDRAADEALAAAGWSVVRVWEHE 128 >UniRef50_D0LCF9 DNA mismatch endonuclease Vsr n=1 Tax=Gordonia bronchialis DSM 43247 RepID=D0LCF9_GORB4 Length = 161 Score = 140 bits (353), Expect = 1e-32, Method: Composition-based stats. Identities = 42/134 (31%), Positives = 55/134 (41%), Gaps = 4/134 (2%) Query: 6 DKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDA---SLPGRPDFVVDEYRCVIF 62 T M +DTA E ++ +L +G FR L R D R +F Sbjct: 17 SSETVRSRMSRQRNKDTAPEVQVRKILHARGARFRTDVKLESDLRTRADLAWRGLRLAVF 76 Query: 63 THGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGR 122 GCFWH + + PA+ E+W EK+ NV RDRR + L + GW V WE R Sbjct: 77 IDGCFWHGCPEHATR-PASNAEWWAEKLDANVARDRRTDALLADRGWTVRRYWEHEDPER 135 Query: 123 EKLTDEALTERLEE 136 A RL Sbjct: 136 VADDILATLRRLRR 149 >UniRef50_A4X2E7 DNA mismatch endonuclease vsr n=2 Tax=Actinomycetales RepID=A4X2E7_SALTO Length = 177 Score = 138 bits (348), Expect = 5e-32, Method: Composition-based stats. Identities = 43/124 (34%), Positives = 55/124 (44%), Gaps = 13/124 (10%) Query: 8 ATRSKN-------MRAIATRDTAIEKRLASLLTGQGLAFRVQDASL-PGRPDFVVDEYRC 59 RS +R TRDTA E L + GL +R+ RPD R Sbjct: 16 EARSWVATTEGSHLRGRRTRDTAPEVALRRAVHALGLRYRLGRTLFNRCRPDLAFPGPRV 75 Query: 60 VIFTHGCFWHHHHCY---LFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWE 116 +F GCFWH + F+ P + W KI N +RD+R L E GWRV+ VWE Sbjct: 76 AVFVDGCFWHGCPQHGPSRFRGP--NADRWAAKIETNRQRDQRVDKELVEAGWRVVRVWE 133 Query: 117 CALR 120 C +R Sbjct: 134 CEVR 137 >UniRef50_A1T424 DNA mismatch endonuclease vsr n=12 Tax=Actinomycetales RepID=A1T424_MYCVP Length = 164 Score = 137 bits (346), Expect = 9e-32, Method: Composition-based stats. Identities = 38/116 (32%), Positives = 54/116 (46%), Gaps = 4/116 (3%) Query: 6 DKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPG---RPDFVVDEYRCVIF 62 D R++ M+ TRDT E L LL +GL +RV LP R D V + +F Sbjct: 26 DPKVRAR-MQRQRTRDTEPELALRRLLHARGLRYRVDAQPLPSLRRRADLVFGPAKIAVF 84 Query: 63 THGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECA 118 GCFWH + ++ +W +K+ +N RD + L E GW + VWE Sbjct: 85 VDGCFWHGCPKHGQRITHANPTYWTDKVARNNRRDVETDAALNEAGWLSIRVWEHD 140 >UniRef50_D2EGA7 DNA mismatch endonuclease Vsr n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EGA7_9EURY Length = 123 Score = 134 bits (339), Expect = 6e-31, Method: Composition-based stats. Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 4/110 (3%) Query: 14 MRAIATRDTAIEKRLASLLTGQGLA-FRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHH 72 M I + DT E +L + G+ +R+ SL G+PD V + + IF G FWH ++ Sbjct: 1 MARIKSIDTTPEIKLRKAIWKLGIRGYRIHLNSLIGKPDLVFTKKKVAIFVDGDFWHGYN 60 Query: 73 CY-LFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRG 121 +P +W +KI +N+ER ++L++ GW+V+ +WE ++ Sbjct: 61 WKNKGIIPK--RGYWQKKITRNIERREVVKAQLKQKGWKVVELWEHDIKK 108 >UniRef50_A3TJK1 Putative DNA mismatch endonuclease n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TJK1_9MICO Length = 140 Score = 133 bits (336), Expect = 1e-30, Method: Composition-based stats. Identities = 41/119 (34%), Positives = 50/119 (42%), Gaps = 6/119 (5%) Query: 4 VHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRP----DFVVDEYRC 59 V A S + A T E L L GL FRVQ +PG P D + Sbjct: 6 VPPSARLSARFSSQARDATKPELSLRRELHRHGLRFRVQYL-IPGLPRRRADLAFTRQKV 64 Query: 60 VIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECA 118 +F GCFWH + VP E+WL K N RD +L ELGW V+ +WE Sbjct: 65 AVFVDGCFWHACPLH-CVVPKANREWWLWKFSTNSSRDADTNIKLAELGWTVVRIWEHE 122 >UniRef50_A6WGD4 DNA mismatch endonuclease vsr n=3 Tax=Actinomycetales RepID=A6WGD4_KINRD Length = 152 Score = 125 bits (314), Expect = 5e-28, Method: Composition-based stats. Identities = 35/111 (31%), Positives = 46/111 (41%), Gaps = 7/111 (6%) Query: 13 NMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPG-----RPDFVVDEYRCVIFTHGCF 67 MR +DT E L L +GL + V PG R D V R +F GCF Sbjct: 21 IMRRTGRKDTRPELALRRELHRRGLRYLVDATP-PGTNRRRRADLVFRGARVAVFVDGCF 79 Query: 68 WHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECA 118 WH ++ + P +W K+ RDR + L GW V+ VWE Sbjct: 80 WHSCPVHVHR-PKANAGWWRVKLASITARDRDTDAVLAAAGWCVVRVWEHE 129 >UniRef50_A4SC96 DNA mismatch endonuclease n=1 Tax=Chlorobium phaeovibrioides DSM 265 RepID=A4SC96_PROVI Length = 102 Score = 124 bits (313), Expect = 7e-28, Method: Composition-based stats. Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 6/106 (5%) Query: 37 LAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHHC-YLFKVPATRTEFWLEKIGKNVE 95 + +R+ L GRPD V + IF +GCFWH H+C ++P + T +WL+K+ +N Sbjct: 1 MGYRLHRKDLLGRPDIVWIGKKAAIFVNGCFWHWHNCGKGRRIPDSNTGYWLDKLKQNRL 60 Query: 96 RDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLEEWICGE 141 D ++I L LGW+V I+WEC L + + E++ + + G+ Sbjct: 61 CDAQNIKALTGLGWKVAIIWECELANKS-----YIEEKIRKLLMGD 101 >UniRef50_D1PRX0 Short patch repair protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRX0_9FIRM Length = 115 Score = 116 bits (292), Expect = 2e-25, Method: Composition-based stats. Identities = 29/78 (37%), Positives = 44/78 (56%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 MAD H K RS NM I + ++ E+ + L +G +R +LPG PD V+ +Y+ V Sbjct: 35 MADNHTKEIRSINMSHIRSTNSKPEEIVRKYLFSKGFRYRKNVRTLPGCPDIVLPKYKTV 94 Query: 61 IFTHGCFWHHHHCYLFKV 78 IF +GCFWH + ++ Sbjct: 95 IFVNGCFWHAYAAPKVQL 112 >UniRef50_D2SC98 DNA mismatch endonuclease vsr n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2SC98_9ACTO Length = 143 Score = 79.1 bits (194), Expect = 4e-14, Method: Composition-based stats. Identities = 31/107 (28%), Positives = 40/107 (37%), Gaps = 19/107 (17%) Query: 21 DTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHH-------- 72 DTA E + L +G+ +RV G R I H Sbjct: 27 DTAHELAVRRRLHARGVRYRVDVRPCAGT------RARGDIRKD----HRAPHRSQARGG 76 Query: 73 -CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECA 118 + VP E+WL ++ NV RDRR + L GWRVL WE Sbjct: 77 TLHGGHVPHANREWWLAELAGNVARDRRADAVLGAEGWRVLRFWEHE 123 >UniRef50_Q1PVK2 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PVK2_9BACT Length = 78 Score = 61.4 bits (148), Expect = 9e-09, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 17/37 (45%) Query: 12 KNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPG 48 NM I ++ T E + L G +++ D LPG Sbjct: 20 YNMSKIRSKGTKPELIVRKFLFRNGFRYKLHDKMLPG 56 >UniRef50_Q1LHY8 Putative uncharacterized protein n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LHY8_RALME Length = 58 Score = 51.4 bits (122), Expect = 1e-05, Method: Composition-based stats. Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Query: 67 FWHHHHCYLF-KVPATRTEFWLEKIGKNVERDRRDISRLQELG 108 FWH H C + P + W+ +I N E+D R IS L ELG Sbjct: 16 FWHGHSCKEGTREPKSNQACWVPRIAANHEQDCRQISELMELG 58 >UniRef50_Q2NCJ2 Putative uncharacterized protein n=1 Tax=Erythrobacter litoralis HTCC2594 RepID=Q2NCJ2_ERYLH Length = 51 Score = 47.5 bits (112), Expect = 1e-04, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 6/54 (11%) Query: 93 NVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLEEWICGEGASAQ 146 N RD ++ S L GW VL +WEC L + LT RL ++ + + Sbjct: 2 NRLRDEKNRSALISAGWEVLEIWECQLDEPD------LTNRLNSFLFSANEADE 49 >UniRef50_B0G6N8 Putative uncharacterized protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G6N8_9FIRM Length = 59 Score = 46.8 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 10/32 (31%), Positives = 14/32 (43%) Query: 8 ATRSKNMRAIATRDTAIEKRLASLLTGQGLAF 39 R K M I ++T IE L L +G + Sbjct: 13 EQRRKTMSKIRGKNTTIEVTLQKALWAKGYRY 44 >UniRef50_A2STE7 Superfamily I DNA and RNA helicase and helicase subunits-like protein n=1 Tax=Methanocorpusculum labreanum Z RepID=A2STE7_METLZ Length = 1572 Score = 46.4 bits (109), Expect = 3e-04, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 47/155 (30%), Gaps = 31/155 (20%) Query: 8 ATRSKNMRA--IATRDTA---IEKRLASLLTGQGLAFRVQDASLPGRPDFVV--DE---- 56 RS M I D E +A +L G + R D V + Sbjct: 1232 EDRSSMMSGSDIRGVDDTEYFPE-SVAVMLEDYGYTVSRNVGCVGFRIDIAVSDPKDPGV 1290 Query: 57 YRCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWE 116 Y I G + +W + + +RDR L+ LGW ++ +W Sbjct: 1291 YMAGILCDG-----------------SNYWSSDVAR--DRDRLRSQVLEGLGWHLIRIWS 1331 Query: 117 CALRGREKLTDEALTERLEEWICGEGASAQIDTQG 151 + L + L + +A+I + Sbjct: 1332 AEWFQHPVSCTKILLDFLADIQKPIEPAAEIVEEP 1366 >UniRef50_Q0ASA3 Putative uncharacterized protein n=2 Tax=Alphaproteobacteria RepID=Q0ASA3_MARMM Length = 225 Score = 46.4 bits (109), Expect = 3e-04, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 34/105 (32%), Gaps = 23/105 (21%) Query: 12 KNMRAIATRDTAIEKRLASLLTGQ---GLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFW 68 K R++ R T E L S L + G FR Q P DF E + ++ G Sbjct: 45 KRARSLRKRMTDAELILWSRLRARQLEGFKFRRQHPVAPYIADFACVELKLIVELDGDT- 103 Query: 69 HHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLI 113 H L DRR L+ GW V+ Sbjct: 104 HGTPQELAH-------------------DRRRTGFLEAAGWTVIR 129 >UniRef50_A4U073 Transposase, IS4 n=2 Tax=Alphaproteobacteria RepID=A4U073_9PROT Length = 169 Score = 45.6 bits (107), Expect = 5e-04, Method: Composition-based stats. Identities = 8/27 (29%), Positives = 10/27 (37%) Query: 23 AIEKRLASLLTGQGLAFRVQDASLPGR 49 E + L G FR+ LPG Sbjct: 116 KPEMLVRRCLHSLGFRFRLHRRDLPGN 142 >UniRef50_Q11JR2 Putative uncharacterized protein n=5 Tax=Alphaproteobacteria RepID=Q11JR2_MESSB Length = 137 Score = 45.6 bits (107), Expect = 5e-04, Method: Composition-based stats. Identities = 25/122 (20%), Positives = 36/122 (29%), Gaps = 23/122 (18%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQ---GLAFRVQDASLPGRPDFVVDEY 57 M +N +A+ T E +L + L GL FR Q DF Sbjct: 1 MPHTPVPGRNRRNAKAMRNAMTDAELKLWNSLRAHRLAGLGFRRQMPIAGYIADFACPAE 60 Query: 58 RCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWEC 117 ++ G P T RD +RL+ GW +L W Sbjct: 61 ELIVEVDG--------SQHGEPNT------------ARRDELRTARLKADGWTILRFWND 100 Query: 118 AL 119 + Sbjct: 101 EI 102 >UniRef50_A7KV39 Mobile intron protein n=1 Tax=Bacillus phage 0305phi8-36 RepID=A7KV39_9CAUD Length = 266 Score = 45.2 bits (106), Expect = 7e-04, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 41/107 (38%), Gaps = 20/107 (18%) Query: 22 TAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHHCYLFKVPAT 81 T E+R+ +L + + DF + + I +G +WH Sbjct: 167 TTPERRVKEILDELDIVYFTHHVVEGWNVDFYL-GKKLAIEVNGVYWHSK---------- 215 Query: 82 RTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDE 128 KNV +D+R +S L G+RVL + + L +K+ + Sbjct: 216 ---------QKNVNKDKRKLSELHSKGYRVLTIEDDELNDIDKVKQQ 253 >UniRef50_Q2KAA9 Hypothetical conserved protein n=4 Tax=Alphaproteobacteria RepID=Q2KAA9_RHIEC Length = 204 Score = 44.8 bits (105), Expect = 8e-04, Method: Composition-based stats. Identities = 29/118 (24%), Positives = 36/118 (30%), Gaps = 23/118 (19%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTG---QGLAFRVQDASLPGRPDFVVDEY 57 M R N R + T E +L + L GL+FR Q DF Sbjct: 83 MPHAPVPPQRRANARRMRKALTEAELKLWNELRAHRLMGLSFRRQMPIAGYIVDFACPSR 142 Query: 58 RCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVW 115 R ++ G H + NV D RLQ GW VL W Sbjct: 143 RLIVEIDGS---QHA-----------------LAPNVPYDPIRTQRLQADGWTVLRFW 180 >UniRef50_A6UBV3 Putative uncharacterized protein n=6 Tax=Rhizobiaceae RepID=A6UBV3_SINMW Length = 146 Score = 43.3 bits (101), Expect = 0.003, Method: Composition-based stats. Identities = 31/146 (21%), Positives = 46/146 (31%), Gaps = 26/146 (17%) Query: 7 KATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRP---DFVVDEYRCVIFT 63 ++K R + D E L S L G+ L LP P DF + R V+ Sbjct: 5 NERQTKRARRLRQADNDAEALLWSELRGRHLNGFKFVRQLPLGPYFADFGCRDERLVVEV 64 Query: 64 HGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGRE 123 G H N D R + GW V+ W + Sbjct: 65 DGS---QH--------------------ANRSSDIRRDENMVATGWSVVRFWNMQIFNDR 101 Query: 124 KLTDEALTERLEEWICGEGASAQIDT 149 E + LE+ + GE +A + + Sbjct: 102 PSVLETIVAFLEKRLLGEVRTADLTS 127 >UniRef50_A1SC23 DEAD/DEAH box helicase domain protein n=3 Tax=Actinomycetales RepID=A1SC23_NOCSJ Length = 1741 Score = 43.3 bits (101), Expect = 0.003, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 25/68 (36%), Gaps = 22/68 (32%) Query: 49 RPDFV--VDEYRCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQE 106 RPDFV + +F G HH + +RD + RL+ Sbjct: 1668 RPDFVYDLPGNPVAVFVDG----PHHDDAVR----------------QQRDEQAAERLEN 1707 Query: 107 LGWRVLIV 114 LGW V+ + Sbjct: 1708 LGWTVVRI 1715 >UniRef50_UPI000179168A PREDICTED: similar to C25F9.2 n=1 Tax=Acyrthosiphon pisum RepID=UPI000179168A Length = 717 Score = 42.5 bits (99), Expect = 0.004, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 14/64 (21%) Query: 64 HGCFWHHHHCYLFK---VPATR---TEFWLEKIGKNVERDRRDISRLQELGWRVLIVWEC 117 HGCFWH P ++ + + I + V +L + G++V +W C Sbjct: 264 HGCFWHGCPDCFNSNEINPVNNNTMSDLYNDTIRRTV--------KLTQKGYQVEEMWSC 315 Query: 118 ALRG 121 L+ Sbjct: 316 KLKK 319 >UniRef50_C2AM99 Putative uncharacterized protein n=1 Tax=Tsukamurella paurometabola DSM 20162 RepID=C2AM99_TSUPA Length = 284 Score = 42.5 bits (99), Expect = 0.004, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 36/131 (27%), Gaps = 24/131 (18%) Query: 8 ATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGR--PDFVVDEYRCVIFTHG 65 A R+ A + E+R +LL G++ R D R I G Sbjct: 175 AGRTLLASANGDTHSEAERRFRALLRAAGISGW-HQQHRFERWWIDVAFPGRRIAIEIDG 233 Query: 66 CFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIV-WECALRGREK 124 +H H D +RL GW +L W+ + + Sbjct: 234 WAYHRSHERFAN-------------------DAEKHTRLALAGWTLLRFTWQ-QITEQPA 273 Query: 125 LTDEALTERLE 135 L L Sbjct: 274 EVVRTLARALN 284 >UniRef50_C2BJM6 Superfamily protein I DNA/RNA helicase n=1 Tax=Corynebacterium pseudogenitalium ATCC 33035 RepID=C2BJM6_9CORY Length = 1730 Score = 42.5 bits (99), Expect = 0.005, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 37/105 (35%), Gaps = 22/105 (20%) Query: 16 AIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEY--RCVIFTHGCFWHHHHC 73 + D+ E+R+ + + +G Q R D VV+ R + G +WH Sbjct: 1357 RVEPFDSLFEQRVYNRIIEKGFKVIPQFEEFGYRIDLVVEGAQGRLAVECDGDYWHS--- 1413 Query: 74 YLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECA 118 +N +D+ L+ LGW + ++E Sbjct: 1414 -----------------DRNALQDQHRQRELERLGWTFVRIFESD 1441 >UniRef50_D1PRW7 Putative DNA mismatch endonuclease n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRW7_9FIRM Length = 44 Score = 41.7 bits (97), Expect = 0.007, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 3/43 (6%) Query: 100 DISRLQELGWRVLIVWECALRGREKLTDEALTERLEEWICGEG 142 + L E+GW+VL VWEC L+ + + +LE+ I G+ Sbjct: 2 NSQLLTEIGWKVLTVWECELKKKVRDDR---LAKLEQEIKGQN 41 >UniRef50_A4IT87 Putative uncharacterized protein n=4 Tax=Geobacillus RepID=A4IT87_GEOTN Length = 145 Score = 41.7 bits (97), Expect = 0.007, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 34/96 (35%), Gaps = 21/96 (21%) Query: 21 DTAIEKRLASLLTGQGLAFRVQDASLPGR--PDFVVDEYRCVIFTHGCFWHHHHCYLFKV 78 ++ IE++L LT G + Q P R D + +Y+ I G +H Sbjct: 45 ESPIERKLYEALTWSGYNVKAQYVVPPARYRIDLALPQYKIAIECDGRAYHSTPEQKRH- 103 Query: 79 PATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIV 114 D++ + L+ GW+VL Sbjct: 104 ------------------DQKKDAYLRRKGWKVLRF 121 >UniRef50_A4FK03 Similar to superfamily I DNA and RNA helicases and helicase subunits n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FK03_SACEN Length = 1774 Score = 41.4 bits (96), Expect = 0.009, Method: Composition-based stats. Identities = 24/100 (24%), Positives = 32/100 (32%), Gaps = 22/100 (22%) Query: 21 DTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVV--DEYRCVIFTHGCFWHHHHCYLFKV 78 D+ E+R+ + L +G Q + P R D VV R I G WH Y Sbjct: 1373 DSLFEQRVFNHLADRGYTVIPQYDAKPYRIDLVVIGPSARLAIECDGDHWHGPDVY---- 1428 Query: 79 PATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECA 118 ERD L+ GW + E Sbjct: 1429 ----------------ERDLARQRDLERCGWTFFRIRESD 1452 >UniRef50_A0YCZ9 Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YCZ9_9GAMM Length = 1945 Score = 41.0 bits (95), Expect = 0.013, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 26/57 (45%) Query: 94 VERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLEEWICGEGASAQIDTQ 150 +RDR L+ LGWR++ +W + + RL E + + + A++ Q Sbjct: 1692 RDRDRIRHGILENLGWRLVRLWSTDYFQDPEEAIAKIDRRLNEILEEDRSKAELKRQ 1748 >UniRef50_A0L4F1 Superfamily I DNA and RNA helicase and helicase subunit n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L4F1_MAGSM Length = 1973 Score = 40.6 bits (94), Expect = 0.015, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 46/132 (34%), Gaps = 31/132 (23%) Query: 16 AIATRDTAIEKRLASLLTGQGLA---------FRVQDASLPGRPDFVVDEYRCVIFTHGC 66 +I D+ E+ ++ LT +G FR+ V + F Sbjct: 1616 SIGGYDSPFEEAVSEALTRKGWRVHSQIGVSAFRIDLG-------IVHPQREGHYFV--- 1665 Query: 67 FWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLT 126 C ++ T +RD+ + L+ LGWR++ VW K T Sbjct: 1666 ---GVECDGATYHSSATA---------RDRDKVREAILERLGWRLVRVWSLDWWVNPKDT 1713 Query: 127 DEALTERLEEWI 138 E L +R++ + Sbjct: 1714 LEKLDQRIQAIL 1725 >UniRef50_C6XHF9 Putative uncharacterized protein n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XHF9_LIBAP Length = 1775 Score = 40.2 bits (93), Expect = 0.018, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 21/51 (41%) Query: 94 VERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLEEWICGEGAS 144 +RDR L+ +GWR+ +W E + L E I + +S Sbjct: 1722 RDRDRLRQEVLERMGWRIRRIWSVDWFSNPDEVIEPIIRELRELISQKSSS 1772 >UniRef50_B3QHM0 Putative uncharacterized protein n=9 Tax=Bradyrhizobiaceae RepID=B3QHM0_RHOPT Length = 144 Score = 40.2 bits (93), Expect = 0.020, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 35/120 (29%), Gaps = 23/120 (19%) Query: 16 AIATRDTAIEKRLASLLTGQ---GLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHH 72 + TA E L L G FR Q P DF R +I G H Sbjct: 16 KLRGNSTAAEDILWRRLRRMNVEGSHFRRQVVIGPYIADFACLAKRLIIEVDGS---QHG 72 Query: 73 CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTE 132 ++RD LQ G+RV+ W + + +A+ Sbjct: 73 DEDG-----------------LKRDEVRTQWLQSEGYRVIRFWNNDVMSKTDAVMDAIYN 115 >UniRef50_Q469I5 Putative uncharacterized protein n=3 Tax=Methanosarcina RepID=Q469I5_METBF Length = 1888 Score = 40.2 bits (93), Expect = 0.021, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 25/58 (43%) Query: 94 VERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLEEWICGEGASAQIDTQG 151 +RDR L+ LGW++ VW K + E L E + + I A+ + + Sbjct: 1320 RDRDRLRQQVLEGLGWKIYRVWSTDWYLHPKESREKLLEAVRKSIKETKIQAKSEIEP 1377 >UniRef50_A0QLP5 Putative uncharacterized protein n=3 Tax=Mycobacterium avium RepID=A0QLP5_MYCA1 Length = 293 Score = 39.8 bits (92), Expect = 0.028, Method: Composition-based stats. Identities = 35/149 (23%), Positives = 54/149 (36%), Gaps = 34/149 (22%) Query: 2 ADVHDKATRSKNMRAIA-----------TRDTAIEKRLASLLTGQGL---AFRVQDASLP 47 ADV A R + R I ++ E RL LL GL +++ L Sbjct: 152 ADVVAVADRHRGARGIRRLRASLELADGGAESPQETRLRVLLVRAGLPKPQTQIELRELR 211 Query: 48 GRPDFVVDEYRCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQEL 107 R D E++ + G + P+ R W D I+ L+ Sbjct: 212 VRVDMGWREWKVAVEYDG-------IQHWDDPSQRA--W----------DIERIALLEAA 252 Query: 108 GWRVLIVWECALRGREKLTDEALTERLEE 136 GW V+ V A+ R ++ E +T +L E Sbjct: 253 GWAVIRV-SAAMLSRPQVIVERVTAKLAE 280 >UniRef50_A9VZY5 Putative uncharacterized protein n=1 Tax=Methylobacterium extorquens PA1 RepID=A9VZY5_METEP Length = 2045 Score = 39.4 bits (91), Expect = 0.033, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 37/125 (29%), Gaps = 31/125 (24%) Query: 21 DTAIEKRLASLLTGQGL---------AFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHH 71 D+ E +A L +G FR+ PD E Sbjct: 1580 DSDFEVEVARRLQREGFQVDHQVGVSGFRIDLGI--RHPD--YPERFIA---------GV 1626 Query: 72 HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALT 131 C + ++++ +RDR L LGW +L VW L L Sbjct: 1627 ECDGARYHSSKSA---------RDRDRLREEVLTALGWNILRVWSTDWFDNPDLQTRNLV 1677 Query: 132 ERLEE 136 RL E Sbjct: 1678 SRLRE 1682 >UniRef50_D0J3F2 Putative uncharacterized protein n=2 Tax=Comamonas testosteroni RepID=D0J3F2_COMTE Length = 1594 Score = 39.4 bits (91), Expect = 0.034, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 20/43 (46%) Query: 94 VERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLEE 136 +RDR S L+ GW +L +W C + + E + +E Sbjct: 1327 RDRDRLRQSVLESQGWTLLRIWGCDWFRQPRAQTERVLAAVEA 1369 >UniRef50_A3UG08 Putative uncharacterized protein n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UG08_9RHOB Length = 109 Score = 39.4 bits (91), Expect = 0.034, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 39/115 (33%), Gaps = 22/115 (19%) Query: 22 TAIEKRLASLLTGQ--GLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHHCYLFKVP 79 T E++L S+L + GL FR Q DF + +I G +P Sbjct: 2 TDAERKLWSMLRRRPDGLKFRRQHPIGRYVADFACPQIGLIIELDG--------GQHNLP 53 Query: 80 ATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERL 134 A R RD L+ GW VL W + + + + + + Sbjct: 54 AHRR------------RDEHRTRWLENQGWHVLRFWNTQVFEAPDMLGDQILDLV 96 >UniRef50_UPI0001C31113 protein of unknown function DUF559 n=3 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31113 Length = 270 Score = 39.4 bits (91), Expect = 0.036, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 24/86 (27%), Gaps = 19/86 (22%) Query: 51 DFVVDEYRCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWR 110 D V R + G +H H R F +RDR + L GW Sbjct: 203 DAVWHAARVAVELDGWEFHRH----------RRAF---------QRDREKANALTAAGWT 243 Query: 111 VLIVWECALRGREKLTDEALTERLEE 136 VL + R L + Sbjct: 244 VLRFTHHDVVHRPAAVRAQLRRVVAR 269 >UniRef50_A6E483 DNA helicase, putative n=1 Tax=Roseovarius sp. TM1035 RepID=A6E483_9RHOB Length = 1051 Score = 39.4 bits (91), Expect = 0.036, Method: Composition-based stats. Identities = 29/136 (21%), Positives = 47/136 (34%), Gaps = 32/136 (23%) Query: 8 ATRSKNMRAIATRDTAIEKRLASLLTGQGL--------AFRVQDASLPGRPDFVVDEYRC 59 RSK + D+ E+++ L +GL A R D +L G + + Sbjct: 940 EPRSKIGEGV--FDSDWERKVYHALKARGLDPHPQHEVAGRRLDFALFGT-----NGVKL 992 Query: 60 VIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 + G WH K ++ W RD +L+ LGWRV W L Sbjct: 993 DLEVDGRKWHESPDGRRKT----SDLW---------RD----HQLKSLGWRVRRFWVDEL 1035 Query: 120 RGREKLTDEALTERLE 135 + + + + L Sbjct: 1036 SRDMEKCLDRVEQDLS 1051 >UniRef50_C7JHU4 DNA helicase n=7 Tax=Acetobacter pasteurianus RepID=C7JHU4_ACEP3 Length = 2008 Score = 39.4 bits (91), Expect = 0.037, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 20/48 (41%) Query: 94 VERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLEEWICGE 141 +RDR + L+ LGW +L +W E + L E++ Sbjct: 1720 RDRDRLRQAVLENLGWNILRIWSTDWWTNAPREMERVDRALNEFLEET 1767 >UniRef50_C7IBV6 Superfamily I DNA and RNA helicase and helicase subunits-like protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IBV6_9CLOT Length = 2128 Score = 39.0 bits (90), Expect = 0.045, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 23/47 (48%) Query: 94 VERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLEEWICG 140 ERDR + L+++GW++ +W K L E +++ I G Sbjct: 1866 RERDRLRQTVLEDIGWKIYRIWSTDWIKDPKTEGAKLIEAVKQAIEG 1912 >UniRef50_C3BCE6 Putative uncharacterized protein n=8 Tax=Bacillus cereus group RepID=C3BCE6_BACMY Length = 161 Score = 39.0 bits (90), Expect = 0.046, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 47/133 (35%), Gaps = 31/133 (23%) Query: 23 AIEKRLASLLTGQGL----AFRVQDASLPGRPDFVV---DEYRCVIFTHGCFWHHHHCYL 75 +EKR+ L +G ++V + + DF + + G F Sbjct: 46 KLEKRVYDALRSKGYCPTVQYKVSNTRF--KLDFAFFSSTGSKIDLEIDGPF-------- 95 Query: 76 FKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLE 135 + P ++RDRR ++ GW+V+ + + L+ + L +L Sbjct: 96 HRTPEG------------IKRDRRRDKYMKANGWKVIRITDIILKDGFEKQILLLEAKLN 143 Query: 136 EWICGEGASAQID 148 E G S + D Sbjct: 144 E--LGIEPSKEAD 154 >UniRef50_Q2LRI4 DNA helicase n=2 Tax=Bacteria RepID=Q2LRI4_SYNAS Length = 1606 Score = 39.0 bits (90), Expect = 0.047, Method: Composition-based stats. Identities = 32/156 (20%), Positives = 53/156 (33%), Gaps = 24/156 (15%) Query: 4 VHDKATRSKNMRAIATRDTAI-EKRLASLLTGQGLAFRVQDASLPGRPDFVV--DEYRCV 60 V D + + + E+ + LT G + Q R D VV R Sbjct: 1359 VRDPLASLRIFNQEVGKTESPFERDVLKRLTNAGYRVKSQWQVGYYRIDMVVEGAGKRLA 1418 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 I G +H +EK+ ++ER + L+ LGW+ + + A Sbjct: 1419 IECDGDRYHP----------------MEKLSDDMER----QAILERLGWQFIRIRGSAFY 1458 Query: 121 GREKLTDEALTERLEEW-ICGEGASAQIDTQGIHLL 155 L + +RLEE I E + + L+ Sbjct: 1459 RNPDLAMRPVFDRLEELEIFPEADVGETTASDMTLI 1494 >UniRef50_Q1GS85 Putative uncharacterized protein n=1 Tax=Sphingopyxis alaskensis RepID=Q1GS85_SPHAL Length = 146 Score = 39.0 bits (90), Expect = 0.047, Method: Composition-based stats. Identities = 30/124 (24%), Positives = 38/124 (30%), Gaps = 24/124 (19%) Query: 15 RAIATRDTAIEKRLASLLTGQ--GLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHH 72 R + T EKR+ L L +R Q P DF + VI G H Sbjct: 16 RTLRKHATGAEKRMWQALRETFPALKWRRQVPIGPYFADFFSFAAKLVIEVDG----GQH 71 Query: 73 CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTE 132 A RTEF LQ G VL W + + E ++ Sbjct: 72 AEAASYDARRTEF------------------LQAQGLTVLRFWNNDVLENTRGVMETISL 113 Query: 133 RLEE 136 L E Sbjct: 114 SLRE 117 >UniRef50_B0T195 Putative uncharacterized protein n=2 Tax=Caulobacteraceae RepID=B0T195_CAUSK Length = 142 Score = 39.0 bits (90), Expect = 0.050, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 33/108 (30%), Gaps = 22/108 (20%) Query: 9 TRSKNMRAIATRDTAIEKRLA-SLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCF 67 R++ MR + + + L +G FR Q L DFV R V+ G Sbjct: 4 KRARAMRKAMSVQ-EVRLWVRLRALKAEGFHFRRQAPLLGYFADFVCLGRRLVVEVDGP- 61 Query: 68 WHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVW 115 HHH D L+ G++ L W Sbjct: 62 -HHHELEQA------------------AHDAYRDQTLRRHGFQTLRFW 90 >UniRef50_A5CT51 Putative uncharacterized protein n=2 Tax=Clavibacter michiganensis RepID=A5CT51_CLAM3 Length = 358 Score = 39.0 bits (90), Expect = 0.050, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 35/102 (34%), Gaps = 25/102 (24%) Query: 22 TAIEKRLASLL-----TGQGLAFRVQDASLPGR----PDFVVDEYRCVIFTHGCFWHHHH 72 +A+E+RL L +GL PD V+ E R I H Sbjct: 220 SAVEERLRQDLAARLDHTRGLNAVRLARPFFEHLEAWPDIVLPELRVAIEYDSTGRHG-- 277 Query: 73 CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIV 114 LE +G+ E DRR L+ GW V+ + Sbjct: 278 --------------LEHVGRREEADRRKDRALRASGWEVIRI 305 >UniRef50_Q3MA76 Putative uncharacterized protein n=1 Tax=Anabaena variabilis ATCC 29413 RepID=Q3MA76_ANAVT Length = 251 Score = 39.0 bits (90), Expect = 0.053, Method: Composition-based stats. Identities = 25/134 (18%), Positives = 46/134 (34%), Gaps = 28/134 (20%) Query: 11 SKNMRAIATRDTAI-EKRLASLLTGQGLA-FRV-------QDASLPGRPDFVVDEYRCVI 61 +N+ I + +++ E+RL + L +GL + + R DF + I Sbjct: 130 RQNLSYIDSLESSPLEQRLWAELLARGLDDYIKPQIELYDNEGIYIVRADFASTWLKMAI 189 Query: 62 FTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRG 121 FT G +H RD R+QE+GW V + Sbjct: 190 FTDGITYHSSPQA-------------------QARDAEHNLRIQEMGWVVKRYVTEDIES 230 Query: 122 REKLTDEALTERLE 135 + + E + + + Sbjct: 231 KIEAVIEEIYQLVC 244 >UniRef50_D0LMZ5 DEAD/DEAH box helicase domain protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LMZ5_HALO1 Length = 1861 Score = 38.7 bits (89), Expect = 0.065, Method: Composition-based stats. Identities = 29/119 (24%), Positives = 44/119 (36%), Gaps = 29/119 (24%) Query: 19 TRDTAIEKRLASLLTGQGLAFRVQD---ASLPGRP----DFVVDEYRCVIFTHGCFWHHH 71 + +E R L GLA Q A + G P DF + + + I+ G +H Sbjct: 1759 GVGSPLELRFLRLFERYGLAVDKQVPVTADIGGAPISVADFALPDRQIAIYVDGAAFHT- 1817 Query: 72 HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQE--LGWRVLIVWECALRGREKLTDE 128 G N+ RD RL++ GW+V+++ LR E L E Sbjct: 1818 -------------------GVNLRRDAYIRERLRQGSAGWKVVVLTAADLRRGEALVSE 1857 >UniRef50_Q7UM88 Putative uncharacterized protein n=1 Tax=Rhodopirellula baltica RepID=Q7UM88_RHOBA Length = 122 Score = 38.3 bits (88), Expect = 0.071, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 49/144 (34%), Gaps = 30/144 (20%) Query: 4 VHDKATRSKNMRAIATRDTAIEKRLASLLTGQ---GLAFRVQDASLPGRPDFVVDEYRCV 60 + ++N R + T T E + +LL + G FR Q P DF E R + Sbjct: 3 IRQPPQLTQNTRELRTNQTKPESLVWTLLRNRRLNGHKFRRQFPIPPFIADFACVEKRLI 62 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECA-- 118 + G + H + ++D +RL GW VL C Sbjct: 63 VELDGDY-H---------------------EQQEQQDMSRTARLNRDGWIVLRF--CNAD 98 Query: 119 -LRGREKLTDEALTERLEEWICGE 141 L E + L EEW GE Sbjct: 99 VLENTEAVGVAILRAMGEEWRGGE 122 >UniRef50_B9Q5R9 Putative uncharacterized protein n=3 Tax=Toxoplasma gondii RepID=B9Q5R9_TOXGO Length = 863 Score = 38.3 bits (88), Expect = 0.072, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 46/124 (37%), Gaps = 28/124 (22%) Query: 27 RLASLLTGQGLAFRVQDASLPGRP---DFVVDEYRCVIFTHGCFWHHHHCYLFKVPATRT 83 R+ LL +GL + P P DF + + V+ G H + VP +T Sbjct: 759 RVGRLLFDEGLMSEIDV-EYPLGPYVLDFAIPSRKLVVEVDGE---AHFFFGTTVPTAQT 814 Query: 84 EFWLEKIGKNVERDRRDISRLQELGWRVLIV----WECALRGREKLTDEALTERLEEWIC 139 R L +GWRV++V W +G+ K E + ++ E + Sbjct: 815 --------------RMKRELLAAMGWRVVVVPQELWRNKRKGKIK---EFVARKVREGLE 857 Query: 140 GEGA 143 + + Sbjct: 858 IDNS 861 >UniRef50_C6JN47 Helicase n=7 Tax=Bacteria RepID=C6JN47_FUSVA Length = 1624 Score = 38.3 bits (88), Expect = 0.074, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 39/121 (32%), Gaps = 21/121 (17%) Query: 18 ATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFV--VDEYRCVIFTHGCFWHHHHCYL 75 D+ E+ +A L +G Q R D V + R I G WH Sbjct: 1354 KNSDSVFEEEVAKYLYARGYNIIQQWEVGAYRIDMVAFFENKRVAIECDGERWHST---- 1409 Query: 76 FKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLE 135 + V++D L+ GW + + + T + + E+LE Sbjct: 1410 ---------------EEQVKQDIERQDILERCGWDFIRIRGSRYFRNPEDTMKEVLEKLE 1454 Query: 136 E 136 + Sbjct: 1455 K 1455 >UniRef50_D2LHC1 Putative DNA helicase n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LHC1_RHOVA Length = 1994 Score = 38.3 bits (88), Expect = 0.079, Method: Composition-based stats. Identities = 28/137 (20%), Positives = 39/137 (28%), Gaps = 31/137 (22%) Query: 25 EKRLASLLTGQGL---------AFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHHCYL 75 E + L +G FRV + PD Y + G +H Sbjct: 1638 EDAVKKALEQKGWQVHPQVGVSGFRVDLGVV--HPD-APGRYLAGVECDGATYHRSATA- 1693 Query: 76 FKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLE 135 +RDR L+ LGWR+L VW L RL Sbjct: 1694 ------------------RDRDRLREGVLRNLGWRILRVWSTDWWVDPDSAFAHLNARLT 1735 Query: 136 EWICGEGASAQIDTQGI 152 E + + + Q I Sbjct: 1736 EHLECDRTAEMAKLQEI 1752 >UniRef50_B8GSF1 Putative uncharacterized protein n=2 Tax=Gammaproteobacteria RepID=B8GSF1_THISH Length = 1575 Score = 38.3 bits (88), Expect = 0.080, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 39/133 (29%), Gaps = 25/133 (18%) Query: 18 ATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVD------EYRCVIFTHGCFWHHH 71 D+ E + + G + Q S D V Y + G +H Sbjct: 1239 REPDSPFELEVMRAIERLGYEVQPQVGSKGFYIDLAVRDPAQPGRYILAVECDGASYH-- 1296 Query: 72 HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALT 131 I + ERDR S L+ LGW +W + + L Sbjct: 1297 ---------------SSAIAR--ERDRLRQSVLEGLGWSFHRIWSTEWFRNARGEIDRLR 1339 Query: 132 ERLEEWICGEGAS 144 E +E + AS Sbjct: 1340 ESIESALRSAEAS 1352 >UniRef50_Q8PQ75 Putative uncharacterized protein n=1 Tax=Xanthomonas axonopodis pv. citri RepID=Q8PQ75_XANAC Length = 109 Score = 38.3 bits (88), Expect = 0.082, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 31/97 (31%), Gaps = 27/97 (27%) Query: 22 TAIEKRLASLLTGQ---GLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHHCYLFKV 78 T E+ + L + GL FR Q P DF E R +I G + Sbjct: 2 TDAERAVWRCLRSKQLHGLKFRRQHPIPPYIADFCCIERRLIIELDG------SQHDASS 55 Query: 79 PATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVW 115 R+++ LQ GW VL W Sbjct: 56 DQARSQW------------------LQSQGWTVLRFW 74 >UniRef50_A9D2E6 Putative uncharacterized protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D2E6_9RHIZ Length = 113 Score = 38.3 bits (88), Expect = 0.086, Method: Composition-based stats. Identities = 31/125 (24%), Positives = 40/125 (32%), Gaps = 24/125 (19%) Query: 15 RAIATRDTAIEKRLASLLTG----QGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHH 70 R + T EKRL S L G GL R Q P DF + + VI G H Sbjct: 6 RRLRRTMTEGEKRLWSELRGFKRLYGLHVRKQVPIGPFVADFAIHSAKLVIEVDGE---H 62 Query: 71 HHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEAL 130 H + D+R L+ G+RV+ L E + Sbjct: 63 HFTRQG-----------------MANDKRRDEWLKNAGYRVVRFNTGELSDTFDGCIEQI 105 Query: 131 TERLE 135 LE Sbjct: 106 LRELE 110 >UniRef50_A9FYY3 Putative uncharacterized protein n=1 Tax=Phaeobacter gallaeciensis BS107 RepID=A9FYY3_9RHOB Length = 345 Score = 38.3 bits (88), Expect = 0.087, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 42/155 (27%), Gaps = 44/155 (28%) Query: 5 HDKATRSKNMRAIATRDTAIEKRLASLLTGQGLA-------FR----------------- 40 + R R I ++ IE+ L L +GL +R Sbjct: 211 YTPFKR-WESRHIWGVESDIERFLFQELLSRGLRPQLQWIIYRSGQFYQSLYDVYKDVEF 269 Query: 41 VQDASLPGRPDFVVDEYRCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRD 100 A + D + + +F G + R E+D R Sbjct: 270 RHGAEMLTEADLFFPDEKVAVFCDG-------AKHHRRKKDR------------EKDERI 310 Query: 101 ISRLQELGWRVLIVWECALRGREKLTDEALTERLE 135 S L+ G + V +R + + + + Sbjct: 311 NSALKNFGITPIRVSGQEIRSNLEAVGDRIQSAVS 345 >UniRef50_B9LVP4 Type III restriction protein res subunit n=1 Tax=Halorubrum lacusprofundi ATCC 49239 RepID=B9LVP4_HALLT Length = 2759 Score = 38.3 bits (88), Expect = 0.087, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 26/57 (45%) Query: 94 VERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLEEWICGEGASAQIDTQ 150 +RDR L++LGW + +W + + +TE+++ + G+ S D Sbjct: 2492 RDRDRTRQMVLEDLGWTIHRIWSPDWTSNREQQIKQITEKIDSLVAGKSESTTEDVP 2548 >UniRef50_B7GPT1 Putative uncharacterized protein n=5 Tax=Bifidobacterium longum RepID=B7GPT1_BIFLI Length = 323 Score = 37.9 bits (87), Expect = 0.098, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 27/74 (36%), Gaps = 19/74 (25%) Query: 51 DFVVDEYRCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWR 110 D +Y+ I G HH + K RD++ RL++LGW Sbjct: 214 DMAYPQYKVAIEYDGD--HH-----------------RRFRKQYVRDQQKRRRLRQLGWT 254 Query: 111 VLIVWECALRGREK 124 V+ V+ L K Sbjct: 255 VIEVFADDLWNTAK 268 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_A1BCM5 T/G mismatch-specific endonuclease n=12 Tax=Bact... 206 2e-52 UniRef50_D0C733 T/G mismatch-specific endonuclease n=1 Tax=Acine... 205 4e-52 UniRef50_P09184 Very short patch repair protein n=115 Tax=Entero... 203 1e-51 UniRef50_Q0AK56 T/G mismatch-specific endonuclease n=8 Tax=Prote... 203 1e-51 UniRef50_B0KIU4 DNA mismatch endonuclease Vsr n=1 Tax=Pseudomona... 202 3e-51 UniRef50_D1T035 DNA mismatch endonuclease Vsr n=1 Tax=Acidovorax... 202 4e-51 UniRef50_B4RGD5 Patch repair protein n=4 Tax=Bacteria RepID=B4RG... 199 3e-50 UniRef50_Q5QV95 DNA mismatch endonuclease, patch repair protein ... 198 6e-50 UniRef50_Q21TW8 T/G mismatch-specific endonuclease n=5 Tax=Prote... 198 7e-50 UniRef50_B3EJE0 DNA mismatch endonuclease Vsr n=2 Tax=Bacteria R... 196 2e-49 UniRef50_C9L355 XorII very short patch repair endonuclease n=2 T... 196 2e-49 UniRef50_D1QVC0 Patch repair protein n=1 Tax=Prevotella oris F03... 195 4e-49 UniRef50_Q5NYW8 Very short patch repair protein (DNA mismatch en... 192 2e-48 UniRef50_A9GYW9 DNA mismatch endonuclease vsr n=1 Tax=Roseobacte... 191 7e-48 UniRef50_A0LQ21 T/G mismatch-specific endonuclease n=3 Tax=Prote... 191 8e-48 UniRef50_C7PIW0 DNA mismatch endonuclease Vsr n=8 Tax=Bacteroide... 190 1e-47 UniRef50_B3QE76 DNA mismatch endonuclease Vsr n=1 Tax=Rhodopseud... 190 1e-47 UniRef50_Q1PVJ9 Strongly similar to very short patch repair endo... 188 3e-47 UniRef50_B8F0E1 DNA mismatch endonuclease Vsr n=1 Tax=Thauera sp... 188 4e-47 UniRef50_UPI000196BAC4 hypothetical protein CATMIT_00200 n=1 Tax... 188 5e-47 UniRef50_A3WFL9 DNA mismatch endonuclease Vsr, putative n=1 Tax=... 187 7e-47 UniRef50_C7LPG4 DNA mismatch endonuclease Vsr n=1 Tax=Desulfomic... 186 1e-46 UniRef50_Q9JWD6 Putative very short patch repair endonuclease n=... 186 2e-46 UniRef50_A1S287 T/G mismatch-specific endonuclease n=1 Tax=Shewa... 186 2e-46 UniRef50_D1BA88 DNA mismatch endonuclease Vsr n=6 Tax=Bacteria R... 186 2e-46 UniRef50_A3N1K2 Putative DNA mismatch endonuclease n=2 Tax=Actin... 185 3e-46 UniRef50_A9H9K5 DNA mismatch endonuclease Vsr n=4 Tax=Proteobact... 185 3e-46 UniRef50_Q5ZW52 Patch repair protein n=2 Tax=Legionella RepID=Q5... 185 4e-46 UniRef50_Q3IVR8 T/G mismatch-specific endonuclease n=4 Tax=Bacte... 185 4e-46 UniRef50_Q2S7T9 DNA G:T-mismatch repair endonuclease n=6 Tax=Pro... 185 4e-46 UniRef50_A1B3R0 T/G mismatch-specific endonuclease n=2 Tax=Rhodo... 184 9e-46 UniRef50_Q5X687 Putative uncharacterized protein n=1 Tax=Legione... 184 9e-46 UniRef50_Q56829 XorII very short patch repair endonuclease n=16 ... 183 1e-45 UniRef50_A5V0Q2 T/G mismatch-specific endonuclease n=3 Tax=Bacte... 183 2e-45 UniRef50_C9RP57 DNA mismatch endonuclease Vsr n=1 Tax=Fibrobacte... 183 2e-45 UniRef50_A1U1D0 T/G mismatch-specific endonuclease n=2 Tax=Prote... 182 3e-45 UniRef50_A3PQ65 T/G mismatch-specific endonuclease n=1 Tax=Rhodo... 181 8e-45 UniRef50_A3U5P6 DNA mismatch endonuclease Vsr, putative n=1 Tax=... 180 9e-45 UniRef50_Q31CG2 T/G mismatch-specific endonuclease n=5 Tax=Bacte... 180 1e-44 UniRef50_A2SSP3 T/G mismatch-specific endonuclease n=1 Tax=Metha... 180 2e-44 UniRef50_Q64Q05 Putative very-short-patch-repair endonuclease n=... 179 3e-44 UniRef50_C4ZAA5 Very short patch repair endonuclease, putative n... 179 3e-44 UniRef50_B8HDH1 DNA mismatch endonuclease Vsr n=4 Tax=Bacteria R... 178 3e-44 UniRef50_C7RCX3 DNA mismatch endonuclease Vsr n=1 Tax=Kangiella ... 178 4e-44 UniRef50_Q28ND8 T/G mismatch-specific endonuclease n=1 Tax=Janna... 178 4e-44 UniRef50_C5B599 DNA mismatch endonuclease vsr n=2 Tax=Methylobac... 178 6e-44 UniRef50_D2LK67 DNA mismatch endonuclease Vsr n=1 Tax=Rhodomicro... 177 8e-44 UniRef50_B7GPI0 DNA mismatch endonuclease vsr n=12 Tax=cellular ... 177 9e-44 UniRef50_A4G657 Very short patch repair protein (DNA mismatch en... 177 1e-43 UniRef50_A4ANX8 Putative very-short-patch-repair endonuclease n=... 176 2e-43 UniRef50_C5APE9 Very-short-patch-repair endonuclease n=1 Tax=Met... 176 2e-43 UniRef50_C9PU27 Putative uncharacterized protein n=1 Tax=Prevote... 176 2e-43 UniRef50_B9E7L5 Putative uncharacterized protein n=1 Tax=Macroco... 175 4e-43 UniRef50_Q2SAF1 DNA G:T-mismatch repair endonuclease n=1 Tax=Hah... 174 7e-43 UniRef50_A4L312 V.TspMI n=2 Tax=Thermus RepID=A4L312_9DEIN 173 2e-42 UniRef50_B5JQD1 DNA mismatch endonuclease Vsr family n=1 Tax=Ver... 172 3e-42 UniRef50_D2BGG7 Vsr domain protein T:G mismatch repair endonucle... 171 8e-42 UniRef50_Q12VT6 DNA mismatch (G:T) repair endonuclease n=1 Tax=M... 171 9e-42 UniRef50_A5EB61 T/G mismatch-specific endonuclease n=2 Tax=Brady... 170 1e-41 UniRef50_A1A2S3 Possible XorII very-short-patch-repair endonucle... 170 1e-41 UniRef50_C9MXV4 Patch repair protein n=2 Tax=Leptotrichia hofsta... 170 1e-41 UniRef50_UPI00016AF703 DNA mismatch endonuclease vsr n=2 Tax=pse... 170 2e-41 UniRef50_A3ZZ75 Patch repair protein n=1 Tax=Blastopirellula mar... 170 2e-41 UniRef50_C4RRL0 XorII-short-patch-repair endonuclease n=1 Tax=Mi... 169 2e-41 UniRef50_A0LM24 T/G mismatch-specific endonuclease n=1 Tax=Syntr... 168 4e-41 UniRef50_Q027Y0 T/G mismatch-specific endonuclease n=2 Tax=Acido... 168 4e-41 UniRef50_B0TCI0 DNA mismatch endonuclease vsr, putative n=5 Tax=... 168 5e-41 UniRef50_Q1IIN5 T/G mismatch-specific endonuclease n=1 Tax=Candi... 168 6e-41 UniRef50_C9S232 DNA mismatch endonuclease Vsr n=2 Tax=Geobacillu... 168 6e-41 UniRef50_B1J232 DNA mismatch endonuclease Vsr n=7 Tax=Bacteria R... 168 7e-41 UniRef50_C4FAH6 Putative uncharacterized protein n=1 Tax=Collins... 167 8e-41 UniRef50_C7N4R6 T/G mismatch-specific endonuclease n=3 Tax=Corio... 167 1e-40 UniRef50_A9ADY1 DNA mismatch endonuclease Vsr n=2 Tax=Burkholder... 166 1e-40 UniRef50_C7DGF8 DNA mismatch endonuclease Vsr n=1 Tax=Candidatus... 166 3e-40 UniRef50_Q8EL90 Very-short-patch-repair endonuclease n=3 Tax=Bac... 165 4e-40 UniRef50_C6BBA5 DNA mismatch endonuclease Vsr n=1 Tax=Ralstonia ... 165 5e-40 UniRef50_C7V3C2 Putative uncharacterized protein n=1 Tax=Enteroc... 163 2e-39 UniRef50_UPI0001968FCC hypothetical protein BACCELL_03936 n=1 Ta... 162 3e-39 UniRef50_A1K2B8 Putative hypothetical very short patch repair en... 162 3e-39 UniRef50_C8WJH8 DNA mismatch endonuclease Vsr n=2 Tax=Coriobacte... 161 6e-39 UniRef50_Q1D6D6 Very short patch repair protein n=1 Tax=Myxococc... 160 1e-38 UniRef50_B8G3L1 DNA mismatch endonuclease Vsr n=1 Tax=Chloroflex... 160 1e-38 UniRef50_Q04A40 T/G mismatch-specific endonuclease n=3 Tax=Bacte... 160 1e-38 UniRef50_C0EI85 Putative uncharacterized protein n=2 Tax=Clostri... 160 2e-38 UniRef50_A4E909 Putative uncharacterized protein n=1 Tax=Collins... 160 2e-38 UniRef50_A0RY33 DNA G/T mismatch repair endonuclease n=1 Tax=Cen... 158 6e-38 UniRef50_C7XVZ3 Short-patch-repair endonuclease n=1 Tax=Lactobac... 157 1e-37 UniRef50_D1WVX3 DNA mismatch endonuclease Vsr n=1 Tax=Streptomyc... 157 1e-37 UniRef50_D1A867 DNA mismatch endonuclease Vsr n=1 Tax=Thermomono... 157 1e-37 UniRef50_C8VVT5 DNA mismatch endonuclease Vsr n=1 Tax=Desulfotom... 156 2e-37 UniRef50_P50186 NaeI very short patch repair endonuclease n=2 Ta... 155 6e-37 UniRef50_C0ABV7 DNA G:T-mismatch repair endonuclease n=2 Tax=Ver... 154 8e-37 UniRef50_A6E296 Very short patch repair protein (DNA mismatch en... 154 8e-37 UniRef50_A1SJ03 T/G mismatch-specific endonuclease n=1 Tax=Nocar... 152 3e-36 UniRef50_P36434 HpaII very short patch repair endonuclease n=1 T... 151 4e-36 UniRef50_D0L6H5 DNA mismatch endonuclease Vsr n=1 Tax=Gordonia b... 150 1e-35 UniRef50_C6D8V0 DNA mismatch endonuclease Vsr n=1 Tax=Paenibacil... 150 1e-35 UniRef50_UPI0001BCE75A DNA mismatch endonuclease Vsr n=1 Tax=Sel... 150 2e-35 UniRef50_C9N7G6 DNA mismatch endonuclease Vsr n=5 Tax=Actinomyce... 149 2e-35 UniRef50_Q2IF54 T/G mismatch-specific endonuclease n=1 Tax=Anaer... 149 3e-35 UniRef50_A5CSG2 Putative patch repair endonuclease n=1 Tax=Clavi... 148 7e-35 UniRef50_Q20YF6 DNA mismatch endonuclease vsr n=1 Tax=Rhodopseud... 147 9e-35 UniRef50_D1S9Q4 DNA mismatch endonuclease Vsr n=1 Tax=Micromonos... 147 1e-34 UniRef50_A6BKR1 Putative uncharacterized protein n=1 Tax=Dorea l... 147 1e-34 UniRef50_UPI00016A6F51 putative very short patch repair protein ... 147 1e-34 UniRef50_B5HK48 Putative uncharacterized protein n=3 Tax=Strepto... 147 1e-34 UniRef50_A1W7Y7 Putative very short patch repair protein n=3 Tax... 146 2e-34 UniRef50_B3Q989 DNA mismatch endonuclease Vsr n=4 Tax=Rhodopseud... 146 2e-34 UniRef50_A1UB42 DNA mismatch endonuclease vsr n=4 Tax=Actinomyce... 146 2e-34 UniRef50_UPI0001B50D9E putative DNA mismatch endonuclease n=1 Ta... 146 3e-34 UniRef50_D0LCF9 DNA mismatch endonuclease Vsr n=1 Tax=Gordonia b... 146 3e-34 UniRef50_UPI0001B4F16E very short patch repair protein n=1 Tax=S... 143 1e-33 UniRef50_D0LEE5 DNA mismatch endonuclease Vsr n=2 Tax=Actinomyce... 141 8e-33 UniRef50_A4X2E7 DNA mismatch endonuclease vsr n=2 Tax=Actinomyce... 140 1e-32 UniRef50_A1T424 DNA mismatch endonuclease vsr n=12 Tax=Actinomyc... 140 2e-32 UniRef50_D1SGS2 DNA mismatch endonuclease Vsr n=2 Tax=Actinomyce... 139 2e-32 UniRef50_D2EGA7 DNA mismatch endonuclease Vsr n=1 Tax=Candidatus... 138 6e-32 UniRef50_A3TJK1 Putative DNA mismatch endonuclease n=1 Tax=Janib... 137 1e-31 UniRef50_A6WGD4 DNA mismatch endonuclease vsr n=3 Tax=Actinomyce... 124 7e-28 UniRef50_A4SC96 DNA mismatch endonuclease n=1 Tax=Chlorobium pha... 123 2e-27 UniRef50_D1PRX0 Short patch repair protein n=1 Tax=Subdoligranul... 116 3e-25 UniRef50_A2STE7 Superfamily I DNA and RNA helicase and helicase ... 95 7e-19 UniRef50_D2SC98 DNA mismatch endonuclease vsr n=1 Tax=Geodermato... 90 2e-17 UniRef50_Q2KAA9 Hypothetical conserved protein n=4 Tax=Alphaprot... 85 9e-16 UniRef50_Q11JR2 Putative uncharacterized protein n=5 Tax=Alphapr... 80 3e-14 UniRef50_Q0ASA3 Putative uncharacterized protein n=2 Tax=Alphapr... 75 6e-13 UniRef50_A7KV39 Mobile intron protein n=1 Tax=Bacillus phage 030... 70 3e-11 UniRef50_Q1PVK2 Putative uncharacterized protein n=1 Tax=Candida... 60 2e-08 UniRef50_Q1LHY8 Putative uncharacterized protein n=1 Tax=Cupriav... 56 5e-07 UniRef50_B0G6N8 Putative uncharacterized protein n=1 Tax=Dorea f... 49 6e-05 UniRef50_Q2NCJ2 Putative uncharacterized protein n=1 Tax=Erythro... 48 7e-05 Sequences not found previously or not previously below threshold: UniRef50_B3QHM0 Putative uncharacterized protein n=9 Tax=Bradyrh... 67 2e-10 UniRef50_A6UBV3 Putative uncharacterized protein n=6 Tax=Rhizobi... 61 1e-08 UniRef50_Q2J2F2 Putative uncharacterized protein n=4 Tax=Rhodops... 60 3e-08 UniRef50_Q8KBQ5 DNA methylase, putative n=5 Tax=Bacteria RepID=Q... 59 3e-08 UniRef50_C2BJM6 Superfamily protein I DNA/RNA helicase n=1 Tax=C... 59 5e-08 UniRef50_Q60BC7 DNA methyltransferase n=8 Tax=Bacteria RepID=Q60... 59 6e-08 UniRef50_B0T195 Putative uncharacterized protein n=2 Tax=Cauloba... 58 7e-08 UniRef50_Q7UM88 Putative uncharacterized protein n=1 Tax=Rhodopi... 58 1e-07 UniRef50_Q0HQD0 Putative uncharacterized protein n=1 Tax=Shewane... 58 1e-07 UniRef50_A0YCZ9 Putative uncharacterized protein n=1 Tax=marine ... 57 2e-07 UniRef50_B0TQR5 Putative uncharacterized protein n=1 Tax=Shewane... 57 2e-07 UniRef50_Q2IRE8 Putative uncharacterized protein n=1 Tax=Rhodops... 57 2e-07 UniRef50_Q74DE7 Putative uncharacterized protein n=1 Tax=Geobact... 56 2e-07 UniRef50_A9D2E6 Putative uncharacterized protein n=1 Tax=Hoeflea... 56 4e-07 UniRef50_A3UG08 Putative uncharacterized protein n=1 Tax=Oceanic... 56 5e-07 UniRef50_Q469I5 Putative uncharacterized protein n=3 Tax=Methano... 56 5e-07 UniRef50_A4IT87 Putative uncharacterized protein n=4 Tax=Geobaci... 56 5e-07 UniRef50_Q1GS85 Putative uncharacterized protein n=1 Tax=Sphingo... 55 6e-07 UniRef50_D0J3F2 Putative uncharacterized protein n=2 Tax=Comamon... 55 6e-07 UniRef50_B4WZL9 Putative uncharacterized protein n=1 Tax=Alcaniv... 55 6e-07 UniRef50_B3EIG9 Type I site-specific deoxyribonuclease, HsdR fam... 55 7e-07 UniRef50_P45736 Uncharacterized protein ycjD n=18 Tax=Enterobact... 55 8e-07 UniRef50_B8IN62 Putative uncharacterized protein n=4 Tax=Rhizobi... 55 8e-07 UniRef50_A0LY74 5-methyltetrahydrofolate:homocysteine methyltran... 55 8e-07 UniRef50_C6M9A8 DNA (Cytosine-5-)-methyltransferase n=28 Tax=Pro... 54 9e-07 UniRef50_A9DBA2 Putative uncharacterized protein n=1 Tax=Hoeflea... 54 1e-06 UniRef50_D2MA63 Putative uncharacterized protein n=1 Tax=Rhodops... 54 1e-06 UniRef50_Q8PQ75 Putative uncharacterized protein n=1 Tax=Xanthom... 54 1e-06 UniRef50_D1C1E2 Putative uncharacterized protein n=1 Tax=Sphaero... 54 1e-06 UniRef50_Q0ANZ5 Putative uncharacterized protein n=3 Tax=Alphapr... 54 1e-06 UniRef50_Q1GVC8 Putative uncharacterized protein n=1 Tax=Sphingo... 54 1e-06 UniRef50_A3XGZ5 DNA methylase, putative n=1 Tax=Leeuwenhoekiella... 54 1e-06 UniRef50_B8GSF1 Putative uncharacterized protein n=2 Tax=Gammapr... 54 2e-06 UniRef50_A6E483 DNA helicase, putative n=1 Tax=Roseovarius sp. T... 53 3e-06 UniRef50_B3QF84 Putative uncharacterized protein n=2 Tax=Rhodops... 53 3e-06 UniRef50_C8SSW9 Putative uncharacterized protein n=2 Tax=Mesorhi... 53 3e-06 UniRef50_B8GV81 Putative uncharacterized protein n=1 Tax=Thioalk... 53 3e-06 UniRef50_C2AM99 Putative uncharacterized protein n=1 Tax=Tsukamu... 53 3e-06 UniRef50_C3BCE6 Putative uncharacterized protein n=8 Tax=Bacillu... 53 3e-06 UniRef50_Q3BYE9 Putative uncharacterized protein n=4 Tax=Xanthom... 53 3e-06 UniRef50_D0Y5E4 Putative uncharacterized protein n=1 Tax=Cauloba... 53 4e-06 UniRef50_Q9RXT5 Putative uncharacterized protein n=1 Tax=Deinoco... 53 4e-06 UniRef50_Q3A652 Putative uncharacterized protein n=1 Tax=Pelobac... 53 5e-06 UniRef50_A7HGL3 Putative uncharacterized protein n=1 Tax=Anaerom... 52 5e-06 UniRef50_A5GAK4 Putative uncharacterized protein n=2 Tax=Proteob... 52 5e-06 UniRef50_C6JN47 Helicase n=7 Tax=Bacteria RepID=C6JN47_FUSVA 52 6e-06 UniRef50_C7JHU4 DNA helicase n=7 Tax=Acetobacter pasteurianus Re... 52 7e-06 UniRef50_Q2K531 Hypothetical conserved protein n=8 Tax=Rhizobium... 52 7e-06 UniRef50_B2IF32 DNA helicase, putative n=2 Tax=Rhizobiales RepID... 52 7e-06 UniRef50_A4FK03 Similar to superfamily I DNA and RNA helicases a... 52 7e-06 UniRef50_B8ER54 Putative DNA helicase related protein n=1 Tax=Me... 52 7e-06 UniRef50_C8WWU3 Superfamily I DNA and RNA helicase and helicase ... 51 8e-06 UniRef50_Q13ET6 Putative uncharacterized protein n=4 Tax=Rhodops... 51 9e-06 UniRef50_A9VZY5 Putative uncharacterized protein n=1 Tax=Methylo... 51 9e-06 UniRef50_C7I4I2 Biotin/acetyl-CoA-carboxylase ligase n=1 Tax=Thi... 51 9e-06 UniRef50_D1BJC4 Putative uncharacterized protein n=1 Tax=Sanguib... 51 1e-05 UniRef50_UPI0001904206 hypothetical protein RetlK5_22563 n=1 Tax... 51 1e-05 UniRef50_C5PWZ9 Putative uncharacterized protein n=1 Tax=Sphingo... 51 1e-05 UniRef50_B8H1P3 Hypothetical cytosolic protein n=3 Tax=Caulobact... 51 1e-05 UniRef50_C6XHF9 Putative uncharacterized protein n=1 Tax=Candida... 51 1e-05 UniRef50_B7R5W0 Putative uncharacterized protein n=1 Tax=Carboxy... 51 1e-05 UniRef50_A0P3H1 Putative uncharacterized protein n=2 Tax=cellula... 51 2e-05 UniRef50_C8TQY9 Conserved predicted protein n=17 Tax=Proteobacte... 50 2e-05 UniRef50_C7IBV6 Superfamily I DNA and RNA helicase and helicase ... 50 2e-05 UniRef50_A1KA28 Putative uncharacterized protein ycjD n=1 Tax=Az... 50 2e-05 UniRef50_C1DMG9 Putative uncharacterized protein n=2 Tax=Proteob... 50 2e-05 UniRef50_Q21U02 DNA helicase related protein n=19 Tax=cellular o... 50 2e-05 UniRef50_A5VDE8 Putative uncharacterized protein n=1 Tax=Sphingo... 50 3e-05 UniRef50_B1XR21 Putative uncharacterized protein n=4 Tax=Cyanoba... 50 3e-05 UniRef50_Q8VPS7 Putative uncharacterized protein n=1 Tax=Burkhol... 50 3e-05 UniRef50_B0MKF4 Putative uncharacterized protein n=1 Tax=Eubacte... 50 3e-05 UniRef50_A0L4F1 Superfamily I DNA and RNA helicase and helicase ... 49 3e-05 UniRef50_C6P535 Putative uncharacterized protein n=1 Tax=Siderox... 49 3e-05 UniRef50_Q4UU23 DNA helicase related protein n=3 Tax=Proteobacte... 49 3e-05 UniRef50_Q8KC08 DNA helicase, putative n=2 Tax=Bacteria RepID=Q8... 49 3e-05 UniRef50_B5UW08 Putative uncharacterized protein n=1 Tax=Bacillu... 49 3e-05 UniRef50_Q11GI6 Putative uncharacterized protein n=2 Tax=Rhizobi... 49 4e-05 UniRef50_D2LHC1 Putative DNA helicase n=1 Tax=Rhodomicrobium van... 49 4e-05 UniRef50_Q60CT2 Conserved domain protein n=5 Tax=Proteobacteria ... 49 4e-05 UniRef50_UPI000179168A PREDICTED: similar to C25F9.2 n=1 Tax=Acy... 49 4e-05 UniRef50_B9JEI7 Putative uncharacterized protein n=1 Tax=Agrobac... 49 5e-05 UniRef50_Q47S09 Similar to Superfamily I DNA and RNA helicases a... 49 5e-05 UniRef50_Q1GTS1 Putative uncharacterized protein n=1 Tax=Sphingo... 49 5e-05 UniRef50_Q2N7D3 Putative uncharacterized protein n=1 Tax=Erythro... 49 5e-05 UniRef50_D1J826 Putative uncharacterized protein n=1 Tax=Mycopla... 49 5e-05 UniRef50_Q3ADV2 Conserved domain protein n=2 Tax=Bacteria RepID=... 49 5e-05 UniRef50_A5G8Z3 Putative uncharacterized protein n=2 Tax=Geobact... 49 5e-05 UniRef50_Q3KAE1 Putative uncharacterized protein n=1 Tax=Pseudom... 49 5e-05 UniRef50_A8IGF2 Uncharacterized protein n=2 Tax=Rhizobiales RepI... 49 6e-05 UniRef50_A0P3K7 Putative uncharacterized protein n=1 Tax=Labrenz... 49 6e-05 UniRef50_D0KVV0 Putative uncharacterized protein n=2 Tax=Halothi... 49 6e-05 UniRef50_Q1N8N9 Putative uncharacterized protein n=1 Tax=Sphingo... 49 6e-05 UniRef50_Q0G591 Putative uncharacterized protein n=1 Tax=Fulvima... 48 7e-05 UniRef50_C7M3G0 Leucyl-tRNA synthetase n=5 Tax=Bacteria RepID=C7... 48 7e-05 UniRef50_Q2N7C3 Putative uncharacterized protein n=1 Tax=Erythro... 48 7e-05 UniRef50_Q1VTJ3 Leucyl-tRNA synthetase n=3 Tax=Bacteria RepID=Q1... 48 8e-05 UniRef50_Q5X7A4 Putative uncharacterized protein n=5 Tax=Legione... 48 8e-05 UniRef50_C5CMG5 Putative uncharacterized protein n=1 Tax=Variovo... 48 8e-05 UniRef50_P44075 Uncharacterized protein HI0925 n=23 Tax=Gammapro... 48 9e-05 UniRef50_Q2J939 DNA helicase, putative n=3 Tax=Frankia RepID=Q2J... 48 9e-05 UniRef50_Q2LRI4 DNA helicase n=2 Tax=Bacteria RepID=Q2LRI4_SYNAS 48 9e-05 UniRef50_B8F8Z2 Putative uncharacterized protein n=1 Tax=Desulfa... 48 9e-05 UniRef50_B8HN08 Putative uncharacterized protein n=1 Tax=Cyanoth... 48 1e-04 UniRef50_A5V3D5 Putative uncharacterized protein n=1 Tax=Sphingo... 48 1e-04 UniRef50_A5G528 Putative uncharacterized protein n=3 Tax=Geobact... 48 1e-04 UniRef50_A6AG73 DNA methyltransferase n=4 Tax=Vibrio cholerae Re... 48 1e-04 UniRef50_B8IMU8 Putative uncharacterized protein n=1 Tax=Methylo... 48 1e-04 UniRef50_C9Z2D0 Putative uncharacterized protein n=1 Tax=Strepto... 48 1e-04 UniRef50_D1CIG6 Putative uncharacterized protein n=1 Tax=Thermob... 48 1e-04 UniRef50_Q2NFT6 Predicted helicase n=1 Tax=Methanosphaera stadtm... 48 1e-04 UniRef50_UPI0001C419B2 DNA helicase n=1 Tax=Methanobrevibacter r... 47 2e-04 UniRef50_Q3STA0 Putative uncharacterized protein n=4 Tax=Proteob... 47 2e-04 UniRef50_A5L0L4 Putative uncharacterized protein n=1 Tax=Vibrion... 47 2e-04 UniRef50_C7LKU4 Putative uncharacterized protein n=2 Tax=Mycopla... 47 2e-04 UniRef50_B0SW39 Putative uncharacterized protein n=2 Tax=Cauloba... 47 2e-04 UniRef50_Q5P0E9 Putative uncharacterized protein n=1 Tax=Aromato... 47 2e-04 UniRef50_D1JEW5 Putative type I restriction enzyme HindVIIP R pr... 47 2e-04 UniRef50_Q0G7M8 Putative uncharacterized protein n=1 Tax=Fulvima... 47 2e-04 UniRef50_D0SAS8 Putative uncharacterized protein n=1 Tax=Acineto... 47 2e-04 >UniRef50_A1BCM5 T/G mismatch-specific endonuclease n=12 Tax=Bacteria RepID=A1BCM5_CHLPD Length = 176 Score = 206 bits (525), Expect = 2e-52, Method: Composition-based stats. Identities = 68/150 (45%), Positives = 87/150 (58%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 MADV TRS+ M I + +T E R+ L +G FR+ LPG+PD V +YR V Sbjct: 1 MADVVSPETRSRMMSGIRSENTVPEMRVRRGLHARGFRFRLHCGGLPGKPDIVFPKYRAV 60 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 IF HGCFWH H C LFK P TR +FW +KIGKN RD + L GWRVLIVWECAL+ Sbjct: 61 IFIHGCFWHAHECPLFKWPKTREDFWKKKIGKNRIRDLAVMDELARQGWRVLIVWECALK 120 Query: 121 GREKLTDEALTERLEEWICGEGASAQIDTQ 150 G+ + + + + EW+ +I Q Sbjct: 121 GKGRRPIDEVVDSCAEWLLSSSTKREIRGQ 150 >UniRef50_D0C733 T/G mismatch-specific endonuclease n=1 Tax=Acinetobacter baumannii ATCC 19606 RepID=D0C733_ACIBA Length = 174 Score = 205 bits (522), Expect = 4e-52, Method: Composition-based stats. Identities = 67/154 (43%), Positives = 90/154 (58%), Gaps = 2/154 (1%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M D+ D ATRS+ M I R+T E + SLL QG FR+ LPG+PD V+ +Y+ + Sbjct: 1 MVDIVDSATRSRMMSNIKGRNTKPELLIRSLLHAQGFRFRIHRKDLPGKPDIVLPKYKAI 60 Query: 61 IFTHGCFWHHH-HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 IF HGCFWH H +C LFK+P +RTEFW KI KN + D + L GWR+ +WECA+ Sbjct: 61 IFIHGCFWHGHQNCRLFKLPGSRTEFWEAKISKNQDNDLKTKELLLNSGWRICTIWECAV 120 Query: 120 RGREKLTDEALTERLEEWICGEGASAQIDTQGIH 153 R +K AL L +W+ +ID I+ Sbjct: 121 RRSKKDPV-ALMNILTKWLSCSEQLLEIDEPMIN 153 >UniRef50_P09184 Very short patch repair protein n=115 Tax=Enterobacteriaceae RepID=VSR_ECOLI Length = 156 Score = 203 bits (517), Expect = 1e-51, Method: Composition-based stats. Identities = 156/156 (100%), Positives = 156/156 (100%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV Sbjct: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR Sbjct: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 Query: 121 GREKLTDEALTERLEEWICGEGASAQIDTQGIHLLA 156 GREKLTDEALTERLEEWICGEGASAQIDTQGIHLLA Sbjct: 121 GREKLTDEALTERLEEWICGEGASAQIDTQGIHLLA 156 >UniRef50_Q0AK56 T/G mismatch-specific endonuclease n=8 Tax=Proteobacteria RepID=Q0AK56_MARMM Length = 168 Score = 203 bits (517), Expect = 1e-51, Method: Composition-based stats. Identities = 67/151 (44%), Positives = 86/151 (56%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M DV D ATRS+ M I ++T E + L G+ +R+ D LPG+PD V+ +YR V Sbjct: 1 MPDVVDSATRSRMMAGIKAKNTKPEMLVRRGLHAMGIRYRLHDKRLPGKPDLVLPKYRSV 60 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 IF HGCFWH H C FK P TR +FW EKI N +RD + IS L GWRV +VWECALR Sbjct: 61 IFVHGCFWHGHDCPAFKWPKTREKFWREKISTNRKRDEKQISDLVRSGWRVSVVWECALR 120 Query: 121 GREKLTDEALTERLEEWICGEGASAQIDTQG 151 + E + + L WI +A+ Sbjct: 121 SKTPDKVETILKLLASWIEQREIAAEKSDDP 151 >UniRef50_B0KIU4 DNA mismatch endonuclease Vsr n=1 Tax=Pseudomonas putida GB-1 RepID=B0KIU4_PSEPG Length = 158 Score = 202 bits (514), Expect = 3e-51, Method: Composition-based stats. Identities = 67/132 (50%), Positives = 81/132 (61%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M DVH RS+NMRAI +DT E + L +G +R+ A LPG PD V+ +YR Sbjct: 1 MVDVHTPEARSRNMRAIRNKDTKPELLIRKALHARGFRYRLGGAGLPGHPDIVLPKYRTA 60 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 IF HGCFWH H+C FK+PATRTEFW KI N ERD+R S L E GW VL VWEC+L+ Sbjct: 61 IFIHGCFWHGHNCKYFKLPATRTEFWAGKIRSNQERDQRSTSLLVEQGWSVLTVWECSLK 120 Query: 121 GREKLTDEALTE 132 + L E Sbjct: 121 PSGPGVEAVLHE 132 >UniRef50_D1T035 DNA mismatch endonuclease Vsr n=1 Tax=Acidovorax avenae subsp. avenae ATCC 19860 RepID=D1T035_9BURK Length = 152 Score = 202 bits (513), Expect = 4e-51, Method: Composition-based stats. Identities = 62/152 (40%), Positives = 81/152 (53%), Gaps = 3/152 (1%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M DV A RS+ M I +++ E + L G FR+ LPG PD + + Sbjct: 1 MVDVVSPAKRSQMMSGIKGKNSLPEMLVRKALFAMGHRFRLHRRDLPGTPDIAMPGRKIA 60 Query: 61 IFTHGCFWHHH-HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 IF HGCFWH H C K P+TRTEFW K+ NV+RDRR +L E+GWRVL VWEC+ Sbjct: 61 IFVHGCFWHAHQGCKYAKTPSTRTEFWTTKLQGNVDRDRRAADKLAEMGWRVLNVWECST 120 Query: 120 RGREKLTDEALTERLEEWICGEGASAQIDTQG 151 R +T E L++ L WI + +I Sbjct: 121 RDP--VTAEGLSDALRAWIDSDAPVGEIRAPS 150 >UniRef50_B4RGD5 Patch repair protein n=4 Tax=Bacteria RepID=B4RGD5_PHEZH Length = 164 Score = 199 bits (506), Expect = 3e-50, Method: Composition-based stats. Identities = 62/150 (41%), Positives = 74/150 (49%) Query: 2 ADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVI 61 AD R +NM AI +T E + L GL +R+ D LPG PD V R + Sbjct: 9 ADPLTPQQRRRNMAAIRAANTKPEMLVRRGLHAHGLRYRLHDRGLPGTPDLVFRSARVAV 68 Query: 62 FTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRG 121 F HGCFWH H C L P T +FW KI +N ERD + L LGWRV VWECALRG Sbjct: 69 FVHGCFWHGHDCSLGVRPRTNADFWTAKINRNRERDEAAEAALLMLGWRVATVWECALRG 128 Query: 122 REKLTDEALTERLEEWICGEGASAQIDTQG 151 RE+ RL +I SA + Sbjct: 129 RERPPLPETLGRLAAFIRSGSPSALVLRSP 158 >UniRef50_Q5QV95 DNA mismatch endonuclease, patch repair protein n=1 Tax=Idiomarina loihiensis RepID=Q5QV95_IDILO Length = 171 Score = 198 bits (503), Expect = 6e-50, Method: Composition-based stats. Identities = 67/152 (44%), Positives = 95/152 (62%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 MADVH+ R KNMRAI +RDT+IE ++ +L G +R+ +LPG+PD + +YR V Sbjct: 1 MADVHNTEQRRKNMRAIKSRDTSIEIQVRRILWHAGYRYRLNVKALPGKPDIYLPKYRAV 60 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 I +GC WH H+C F +P TRTEFW KI NV RD + ++ L + G R+L++WECAL+ Sbjct: 61 IQINGCLWHGHNCPQFVLPKTRTEFWRNKIKDNVRRDLKSVAALHDKGLRLLVIWECALQ 120 Query: 121 GREKLTDEALTERLEEWICGEGASAQIDTQGI 152 G+ +L + L W+ A ID QG+ Sbjct: 121 GKARLDNRYTYNLLNRWLSSTELLANIDKQGL 152 >UniRef50_Q21TW8 T/G mismatch-specific endonuclease n=5 Tax=Proteobacteria RepID=Q21TW8_RHOFD Length = 152 Score = 198 bits (503), Expect = 7e-50, Method: Composition-based stats. Identities = 63/152 (41%), Positives = 80/152 (52%), Gaps = 3/152 (1%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 MADV RS+ M I ++T E + +L G FR+ LPG PD V+ + Sbjct: 1 MADVVSPTVRSRMMSGIKGKNTQPEILVRRMLFASGYRFRLHRRDLPGTPDIVMPGRKIA 60 Query: 61 IFTHGCFWHHH-HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 IF HGCFWH H C K+P TR +FW K+ N+ERDRR + RLQ LGWRVL VWEC+ Sbjct: 61 IFVHGCFWHFHRGCRFAKMPVTRADFWKAKLEANMERDRRAVERLQGLGWRVLCVWECST 120 Query: 120 RGREKLTDEALTERLEEWICGEGASAQIDTQG 151 R + L L EWI + +I Sbjct: 121 RDAKATVS--LQGTLCEWIESDARLGEIGAPS 150 >UniRef50_B3EJE0 DNA mismatch endonuclease Vsr n=2 Tax=Bacteria RepID=B3EJE0_CHLPB Length = 153 Score = 196 bits (499), Expect = 2e-49, Method: Composition-based stats. Identities = 56/145 (38%), Positives = 80/145 (55%), Gaps = 1/145 (0%) Query: 3 DVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIF 62 DV RS NM I ++T E + L G +R+ LPG+PD V+ +YR VIF Sbjct: 2 DVLSPKQRSFNMSRIRGKNTRPEIMVRKWLWANGYRYRLHRKDLPGKPDIVLPKYRAVIF 61 Query: 63 THGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGR 122 HGCFWH H C P TR +FW K +NV RD+R+I L E WRV+++WEC+L G+ Sbjct: 62 VHGCFWHRHGCTFTTTPDTRRDFWYTKFEENVARDKRNIKYLLEQYWRVMVIWECSLIGK 121 Query: 123 EKLTDEALTERLEEWICGEGASAQI 147 ++ + E L +++ E + Sbjct: 122 NAAPEQVVVE-LTDFLNSETCFTET 145 >UniRef50_C9L355 XorII very short patch repair endonuclease n=2 Tax=Bacteroidetes RepID=C9L355_9BACE Length = 138 Score = 196 bits (499), Expect = 2e-49, Method: Composition-based stats. Identities = 51/140 (36%), Positives = 84/140 (60%), Gaps = 2/140 (1%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M+D+ + RS M I+++DT E + L +G +R+ +LPG+PD V+ +Y+ + Sbjct: 1 MSDIFSQTKRSDIMSKISSKDTKPEILVRKFLFSKGFRYRINVKTLPGKPDIVLPKYKTI 60 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 IF +GCFWH H+C K+P++ T+FW EKI N RD ++ L +LGW+V+I+W+C + Sbjct: 61 IFVNGCFWHGHNCKKGKLPSSNTDFWKEKISNNKSRDAKNSDLLVKLGWKVIIIWQCEIS 120 Query: 121 GREKLTDEALTERLEEWICG 140 + T + +L E I Sbjct: 121 KIDNRT--KILNKLLEDIKQ 138 >UniRef50_D1QVC0 Patch repair protein n=1 Tax=Prevotella oris F0302 RepID=D1QVC0_9BACT Length = 172 Score = 195 bits (495), Expect = 4e-49, Method: Composition-based stats. Identities = 54/152 (35%), Positives = 79/152 (51%), Gaps = 2/152 (1%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M+D H R NM AI +DT E + L G +R+ LPGRPD V+ +YR Sbjct: 1 MSDTHTPQQRHANMAAIHGKDTKPELVVRKWLWNHGYRYRLNHPRLPGRPDIVLRKYRTC 60 Query: 61 IFTHGCFWHHH-HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 IF +GCFWH H C + VP T EFW+ KI +N +RD +L +GW + +WEC L Sbjct: 61 IFVNGCFWHGHEGCKYYTVPKTNMEFWINKIRRNRKRDHEVCQKLSSMGWHCITIWECEL 120 Query: 120 RGREKL-TDEALTERLEEWICGEGASAQIDTQ 150 + ++ T E+L L + + + + + Sbjct: 121 KSYDRERTLESLAFTLNKIFLQDHSIRRYEIP 152 >UniRef50_Q5NYW8 Very short patch repair protein (DNA mismatch endonuclease) n=2 Tax=Proteobacteria RepID=Q5NYW8_AZOSE Length = 157 Score = 192 bits (489), Expect = 2e-48, Method: Composition-based stats. Identities = 63/152 (41%), Positives = 81/152 (53%), Gaps = 3/152 (1%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 MAD+ D ATRSK M +I ++T E ++ L G+ FR+ LPG PD V +YR Sbjct: 1 MADIVDPATRSKIMASIRGKNTKPELQVRRGLHQLGVRFRLHRRDLPGSPDLVFPKYRAA 60 Query: 61 IFTHGCFWHHHH-CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 +F HGCFWH H C L P+ W+EK NVERDRR I+ LQ+ GWRV ++WECAL Sbjct: 61 LFVHGCFWHRHDSCRLAYTPSDNGHKWVEKFKANVERDRRQIALLQQAGWRVFVIWECAL 120 Query: 120 RGREKLTDEALTERLEEWICGEGASAQIDTQG 151 R + L E G + T Sbjct: 121 RANDLSDL--LVAVAAELKTGVSTYREWPTSP 150 >UniRef50_A9GYW9 DNA mismatch endonuclease vsr n=1 Tax=Roseobacter litoralis Och 149 RepID=A9GYW9_9RHOB Length = 146 Score = 191 bits (485), Expect = 7e-48, Method: Composition-based stats. Identities = 64/138 (46%), Positives = 88/138 (63%) Query: 14 MRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHHC 73 M AI +T E + L +G +R+ D+ L GRPD V+ YR V+F +GCFWH H C Sbjct: 1 MAAIRGINTKPELLIRHGLHARGFRYRLHDSKLAGRPDLVLPRYRAVVFVNGCFWHGHDC 60 Query: 74 YLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTER 133 LFK P TR EFW KIG NVERD+R+++ L+ GWRV IVWEC L+G+++L + Sbjct: 61 PLFKWPKTREEFWRGKIGGNVERDQRNLAALKAAGWRVGIVWECVLKGKQRLQPTKVLGL 120 Query: 134 LEEWICGEGASAQIDTQG 151 L EWI G+ ++ I+ +G Sbjct: 121 LSEWIEGDTSACSIEGRG 138 >UniRef50_A0LQ21 T/G mismatch-specific endonuclease n=3 Tax=Proteobacteria RepID=A0LQ21_SYNFM Length = 165 Score = 191 bits (485), Expect = 8e-48, Method: Composition-based stats. Identities = 59/147 (40%), Positives = 80/147 (54%), Gaps = 1/147 (0%) Query: 3 DVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIF 62 D DK TRS+ M + +DT E +L L GL +R+ D LPG PD V ++ +F Sbjct: 2 DTVDKTTRSRIMSRVGQKDTGPEMKLRRSLHKIGLRYRLHDKRLPGSPDIVFPRFKAALF 61 Query: 63 THGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGR 122 HGCFWH H C P T +FW +K +N+ RDRR I LQ+ GWRV +VWEC+L+G+ Sbjct: 62 VHGCFWHRHGCKATTTPGTNVDFWRKKFDENIARDRRHIEALQDAGWRVAVVWECSLKGK 121 Query: 123 EKLTDEALTERLEEWICGEGASAQIDT 149 DE + + EW+ I Sbjct: 122 RADPDE-VARLVSEWLVSSEKHKVIPE 147 >UniRef50_C7PIW0 DNA mismatch endonuclease Vsr n=8 Tax=Bacteroidetes RepID=C7PIW0_CHIPD Length = 140 Score = 190 bits (483), Expect = 1e-47, Method: Composition-based stats. Identities = 62/138 (44%), Positives = 84/138 (60%), Gaps = 2/138 (1%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M DVH K TRS NM I ++T E + L QG +R+ + LPG PD V+ +Y+ V Sbjct: 1 MVDVHSKETRSYNMSQIKGKNTKPEILVRKFLFAQGYRYRLHNKKLPGTPDLVLPKYKTV 60 Query: 61 IFTHGCFWHHH-HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 IF HGCFWH H C F +P TRTE+WL KI NV +D I+ L+ +GWR+LI+WEC L Sbjct: 61 IFIHGCFWHRHEGCRYFVIPKTRTEWWLNKINGNVRKDIESINLLKSMGWRILILWECDL 120 Query: 120 R-GREKLTDEALTERLEE 136 + +++ E L + L Sbjct: 121 KPDKKEHRLELLLKELNA 138 >UniRef50_B3QE76 DNA mismatch endonuclease Vsr n=1 Tax=Rhodopseudomonas palustris TIE-1 RepID=B3QE76_RHOPT Length = 152 Score = 190 bits (483), Expect = 1e-47, Method: Composition-based stats. Identities = 57/150 (38%), Positives = 78/150 (52%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M DV + R NM I +T E + S L G FR+ D LPG PD V+ +R V Sbjct: 1 MTDVLSREQRRFNMSRIRGSNTKPEVLVRSALHALGFRFRLHDRRLPGTPDIVLRRHRAV 60 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 IF +GCFWH H C K+P TR EFW +KI + RD I +L LGW V++VWEC+LR Sbjct: 61 IFVNGCFWHGHGCKYSKMPNTRAEFWRQKISRTKARDTAAIEQLLNLGWNVIVVWECSLR 120 Query: 121 GREKLTDEALTERLEEWICGEGASAQIDTQ 150 GR+++ + + + + Sbjct: 121 GRDQVARNSAWTSIRTALAKRHPTISEVVP 150 >UniRef50_Q1PVJ9 Strongly similar to very short patch repair endonuclease n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PVJ9_9BACT Length = 138 Score = 188 bits (479), Expect = 3e-47, Method: Composition-based stats. Identities = 61/138 (44%), Positives = 85/138 (61%), Gaps = 2/138 (1%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M DVHDK TRS NM I +DT E + L G G +++ D LPG+PD V +Y+ V Sbjct: 1 MTDVHDKKTRSYNMSKIRGKDTKPEIIVRKFLFGNGFRYKLHDKMLPGKPDLVFPKYKTV 60 Query: 61 IFTHGCFWHHHH-CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 +F HGCFWH H C F +P TR ++WLEKI +N + D + +L++LGW++L V+EC L Sbjct: 61 VFIHGCFWHGHDGCKYFVIPKTRRKWWLEKINRNKQLDTENSGKLKKLGWKILTVFECKL 120 Query: 120 R-GREKLTDEALTERLEE 136 + G + T L RL + Sbjct: 121 KHGNMENTLNRLATRLTK 138 >UniRef50_B8F0E1 DNA mismatch endonuclease Vsr n=1 Tax=Thauera sp. MZ1T RepID=B8F0E1_THASP Length = 137 Score = 188 bits (479), Expect = 4e-47, Method: Composition-based stats. Identities = 59/137 (43%), Positives = 80/137 (58%) Query: 13 NMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHH 72 M I +++T IE L L QG +R+ DA LPG+PD V+ YR V+F HGCFWH H Sbjct: 1 MMAGIRSKNTRIEVSLRKALFAQGFRYRINDARLPGKPDIVLPRYRAVVFVHGCFWHGHD 60 Query: 73 CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTE 132 C LF++PA+ T+FW KI N RD R L GWRV ++WECA+RG+++ A+ E Sbjct: 61 CSLFRLPASNTDFWRTKIDTNRARDERACGELAAQGWRVAVIWECAIRGKKEAGVMAVAE 120 Query: 133 RLEEWICGEGASAQIDT 149 L+ W+ I Sbjct: 121 SLQAWLKIGAPQLVIRG 137 >UniRef50_UPI000196BAC4 hypothetical protein CATMIT_00200 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196BAC4 Length = 137 Score = 188 bits (478), Expect = 5e-47, Method: Composition-based stats. Identities = 52/137 (37%), Positives = 79/137 (57%), Gaps = 1/137 (0%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M DV + RSK M I +D E + L G +R D SLPG PD V+ +YR V Sbjct: 1 MPDVFTQEQRSKVMSRIRGKDNKPETMVRKYLWHHGFRYRKNDKSLPGTPDIVILKYRTV 60 Query: 61 IFTHGCFWHHH-HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 +F +GCFWHHH C + P +R E+W++ I +NVE D ++ + LQ+L ++V++VWEC + Sbjct: 61 VFINGCFWHHHYGCKYGRYPQSRKEYWIKHIDRNVENDVKNYNLLQQLDYKVIVVWECEI 120 Query: 120 RGREKLTDEALTERLEE 136 + + L E + + Sbjct: 121 KEDFDHRMKLLIEEITQ 137 >UniRef50_A3WFL9 DNA mismatch endonuclease Vsr, putative n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WFL9_9SPHN Length = 154 Score = 187 bits (476), Expect = 7e-47, Method: Composition-based stats. Identities = 57/154 (37%), Positives = 86/154 (55%), Gaps = 2/154 (1%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M D+ D RS+ M I ++T E + LL G +R+ LPG+PD V+ ++R V Sbjct: 1 MVDIVDPQKRSEMMSGIGGKNTKPELFIRKLLHKGGFRYRLHRKDLPGKPDLVLGKWRTV 60 Query: 61 IFTHGCFWHHH-HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 +F GCFWH H HC LF++P TR EFW +KI N+ RD + S+ + W+++ VWECA+ Sbjct: 61 LFVQGCFWHGHEHCPLFRLPKTRQEFWAKKIKSNIVRDDENRSKYLQTDWKLIEVWECAI 120 Query: 120 RGREKLTDEALTERLEEWI-CGEGASAQIDTQGI 152 +G+ +L + L + I + I Q I Sbjct: 121 KGKTRLDLDEFETLLVDAITTSQQKLISIRGQPI 154 >UniRef50_C7LPG4 DNA mismatch endonuclease Vsr n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LPG4_DESBD Length = 154 Score = 186 bits (474), Expect = 1e-46, Method: Composition-based stats. Identities = 52/141 (36%), Positives = 76/141 (53%), Gaps = 5/141 (3%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M D+ +A RS M + + +T E+ L S L G +R+ +LPG+PD V +Y+ V Sbjct: 1 MTDILSQAERSVLMSKVKSTNTKPERILRSGLHRLGFRYRLNYKALPGKPDLVFPKYKAV 60 Query: 61 IFTHGCFWHHH-HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 IF HGC+WH H C P T +FW K +N+ RD+ S L ++GWR LIVWEC L Sbjct: 61 IFVHGCYWHRHVGCKHASTPNTNVDFWNLKFSENINRDKFVESELMKMGWRFLIVWECEL 120 Query: 120 RGREKLTDEALTERLEEWICG 140 + + E + + W+ Sbjct: 121 KKK---KIETIINAVL-WLDS 137 >UniRef50_Q9JWD6 Putative very short patch repair endonuclease n=18 Tax=Bacteria RepID=VSR_NEIMA Length = 140 Score = 186 bits (473), Expect = 2e-46, Method: Composition-based stats. Identities = 51/140 (36%), Positives = 81/140 (57%), Gaps = 1/140 (0%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M D+ + RS M I +++T E + L QG +R D G+PD V+ +Y+ V Sbjct: 1 MTDIFTTSKRSFVMLKIHSKETKPEVLVRKFLFFQGFRYRKNDKRYVGKPDIVLSKYKTV 60 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 +F HGCFW+ H C +P + T+FWLEKI KN ERD ++ + L+++G++V++VWEC L+ Sbjct: 61 VFIHGCFWYGHSCNKGHIPKSNTDFWLEKITKNCERDIKNETELEKIGFKVIVVWECELK 120 Query: 121 GREKLTDEALTERLEEWICG 140 + + E L + E Sbjct: 121 NK-AICRERLNRLVREIKDA 139 >UniRef50_A1S287 T/G mismatch-specific endonuclease n=1 Tax=Shewanella amazonensis SB2B RepID=A1S287_SHEAM Length = 161 Score = 186 bits (473), Expect = 2e-46, Method: Composition-based stats. Identities = 59/150 (39%), Positives = 86/150 (57%), Gaps = 6/150 (4%) Query: 7 KATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGC 66 K RS NM I DT E L + G +R+ D LPG+PD V +YR VIF +GC Sbjct: 2 KDKRSYNMSRIRGEDTRPEMWLRKRIHALGFRYRLHDKRLPGKPDLVFPKYRAVIFVNGC 61 Query: 67 FWHHHHCYLFKVPATRT------EFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 FWH HHC F+ PA+ + ++W EK+ N +RD +I + +EL WRVL++WECAL+ Sbjct: 62 FWHMHHCRFFQFPASSSTKGRGPQWWREKLIGNRQRDLENIEKCRELRWRVLVLWECALK 121 Query: 121 GREKLTDEALTERLEEWICGEGASAQIDTQ 150 G EKL + + +++ +W+ +I Sbjct: 122 GTEKLPEPQVLQQITQWLESGCHYLEIPAP 151 >UniRef50_D1BA88 DNA mismatch endonuclease Vsr n=6 Tax=Bacteria RepID=D1BA88_THEAS Length = 147 Score = 186 bits (472), Expect = 2e-46, Method: Composition-based stats. Identities = 51/137 (37%), Positives = 80/137 (58%), Gaps = 2/137 (1%) Query: 3 DVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIF 62 D H K RS NM I +++ E+ + L +G +R +LPG PD V+ +Y+ VIF Sbjct: 2 DNHTKEIRSYNMSRIRSKNNKPEELVRKYLFSKGFRYRKNVKALPGCPDIVLPKYKTVIF 61 Query: 63 THGCFWHHH-HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRG 121 +GCFWH H C F P + E+W +K+ +N ERD + +L+++GW+V+IVWEC L+ Sbjct: 62 INGCFWHMHEGCPFFVWPKSNEEYWTKKLIRNKERDYENQEKLKQMGWKVIIVWECELKK 121 Query: 122 -REKLTDEALTERLEEW 137 R + L R+++ Sbjct: 122 ERLDSSLRMLCNRIKDI 138 >UniRef50_A3N1K2 Putative DNA mismatch endonuclease n=2 Tax=Actinobacillus pleuropneumoniae RepID=A3N1K2_ACTP2 Length = 141 Score = 185 bits (471), Expect = 3e-46, Method: Composition-based stats. Identities = 50/137 (36%), Positives = 77/137 (56%), Gaps = 1/137 (0%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M D+ RS+ M + +++T E + + L G +R D G PD ++ +Y+ Sbjct: 1 MTDIFSPQKRSEIMSRVKSKNTKPEIIVRTFLFSVGFRYRKNDKRYAGVPDILLPKYKTA 60 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 IF HGCFWH H C +P++RTEFW KI KN ERD ++I L++ G V+I+WEC L+ Sbjct: 61 IFVHGCFWHGHTCAKGGLPSSRTEFWKNKIMKNKERDVKNIRLLEDSGIHVIIIWECELK 120 Query: 121 GREKLTDEALTERLEEW 137 + L ++ L + E Sbjct: 121 NKT-LREKRLARLVNEI 136 >UniRef50_A9H9K5 DNA mismatch endonuclease Vsr n=4 Tax=Proteobacteria RepID=A9H9K5_GLUDA Length = 153 Score = 185 bits (471), Expect = 3e-46, Method: Composition-based stats. Identities = 55/132 (41%), Positives = 76/132 (57%), Gaps = 1/132 (0%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 MAD + RS+ M I ++DT E L L GL FR+ A LPGRPD V+ +R Sbjct: 1 MADFLEPLERSRRMGRIRSQDTKPEIALRRALHRLGLRFRLGGAGLPGRPDIVLPRHRAA 60 Query: 61 IFTHGCFWHHHH-CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 +F HGCFWH H C + P + T+FW+ + +NV RD + + LQELGW V ++WEC L Sbjct: 61 VFVHGCFWHRHPGCKVASTPKSNTDFWVARFDRNVARDGKVMRELQELGWNVFVIWECEL 120 Query: 120 RGREKLTDEALT 131 + +L+ A Sbjct: 121 SAKSRLSPTATQ 132 >UniRef50_Q5ZW52 Patch repair protein n=2 Tax=Legionella RepID=Q5ZW52_LEGPH Length = 142 Score = 185 bits (470), Expect = 4e-46, Method: Composition-based stats. Identities = 51/123 (41%), Positives = 74/123 (60%), Gaps = 3/123 (2%) Query: 3 DVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIF 62 D+ K RS M +I ++T E + S L QGL FR+ +LPG+PD V +Y V+F Sbjct: 7 DMISKKQRSHIMSSIKGKNTKPEIIVRSFLHRQGLRFRLHSKNLPGQPDLVFRKYNAVVF 66 Query: 63 THGCFWHHHH---CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 +GCFWH H+ C +P T E+W KI +N RD+++I L++LGWRV ++WEC L Sbjct: 67 VNGCFWHGHNEPLCKNSHIPKTNFEYWWNKIERNKSRDKQNIEILKQLGWRVFMIWECEL 126 Query: 120 RGR 122 + Sbjct: 127 KNH 129 >UniRef50_Q3IVR8 T/G mismatch-specific endonuclease n=4 Tax=Bacteria RepID=Q3IVR8_RHOS4 Length = 142 Score = 185 bits (470), Expect = 4e-46, Method: Composition-based stats. Identities = 55/138 (39%), Positives = 79/138 (57%), Gaps = 5/138 (3%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 MAD R + MRA+ T++T E + SLL +G +R+ SLPG+PD V Sbjct: 1 MADTRSPEQRRQIMRAVGTKNTGPELIVRSLLHAKGYRYRLHARSLPGQPDIVFPARHKA 60 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 IF +GCFWH H C ++P +R ++W KI NV RDRR +S L+ LGW+ L+VW+C L+ Sbjct: 61 IFVNGCFWHGHDCAKGRLPTSRLDYWGPKIEANVARDRRKLSELEALGWQTLVVWQCELK 120 Query: 121 GREKLTDEALTERLEEWI 138 E + RL ++ Sbjct: 121 D-----IERVGSRLCAFL 133 >UniRef50_Q2S7T9 DNA G:T-mismatch repair endonuclease n=6 Tax=Proteobacteria RepID=Q2S7T9_HAHCH Length = 138 Score = 185 bits (470), Expect = 4e-46, Method: Composition-based stats. Identities = 55/140 (39%), Positives = 83/140 (59%), Gaps = 6/140 (4%) Query: 9 TRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFW 68 RS+ M A+ ++DT E ++ LL G +R+ LP +PD V + VIF HGCFW Sbjct: 2 KRSEIMAAVKSKDTTPELKVRKLLHSLGYRYRLHANDLPCKPDIVFRSRKKVIFIHGCFW 61 Query: 69 HHHHCYLF-KVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTD 127 H H C ++P T E+W++KIG+N+ERDRR L +LGWR L++WEC L+ Sbjct: 62 HGHPCKRGARMPKTNAEYWIKKIGRNIERDRRGYEALHQLGWRCLVLWECELKD-----M 116 Query: 128 EALTERLEEWICGEGASAQI 147 +AL E L ++ + +++I Sbjct: 117 DALQETLHAFLEEDSHNSRI 136 >UniRef50_A1B3R0 T/G mismatch-specific endonuclease n=2 Tax=Rhodobacteraceae RepID=A1B3R0_PARDP Length = 154 Score = 184 bits (467), Expect = 9e-46, Method: Composition-based stats. Identities = 65/148 (43%), Positives = 81/148 (54%), Gaps = 3/148 (2%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M D+ D+ TRS+ M I ++T E L L +G FR+ + GRPD + ++R V Sbjct: 1 MTDIVDQQTRSRMMSGIKGKNTKPELALRRALHSRGFRFRLHSGKVHGRPDLALPKHRAV 60 Query: 61 IFTHGCFWHHH-HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 +F HGCFWH H C VPATR EFW K N RD +RL E GWRV VWECAL Sbjct: 61 VFVHGCFWHRHEGCRYATVPATRPEFWRAKFEANAARDSAVRTRLLEDGWRVATVWECAL 120 Query: 120 RGREKLTDEALTERLEEWICGEGASAQI 147 R E+ EA TE L W+ E +I Sbjct: 121 RKPEQ--VEASTESLSIWLRTEELQIEI 146 >UniRef50_Q5X687 Putative uncharacterized protein n=1 Tax=Legionella pneumophila str. Paris RepID=Q5X687_LEGPA Length = 151 Score = 184 bits (467), Expect = 9e-46, Method: Composition-based stats. Identities = 49/148 (33%), Positives = 86/148 (58%) Query: 3 DVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIF 62 D RS+ M+ + + + + E + L +GL +R+ D + G PD + +Y VIF Sbjct: 2 DKFPPKIRSEIMKRVKSNNNSPEIAIRKFLFNKGLRYRINDKDIFGTPDLFLKKYNAVIF 61 Query: 63 THGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGR 122 +GCFWH+H C L K+P T T +W+ K+ N ERD+R+I +L+++G+R+LI+W C+ G+ Sbjct: 62 YNGCFWHNHGCVLSKIPRTNTSYWINKLENNKERDKRNIEQLKKIGFRILIIWRCSHVGK 121 Query: 123 EKLTDEALTERLEEWICGEGASAQIDTQ 150 K + + + ++ WI + +I Sbjct: 122 NKTSLDQILNQIYSWILSDSTYKEIQPP 149 >UniRef50_Q56829 XorII very short patch repair endonuclease n=16 Tax=Proteobacteria RepID=VSX2_XANOR Length = 136 Score = 183 bits (465), Expect = 1e-45, Method: Composition-based stats. Identities = 52/141 (36%), Positives = 71/141 (50%), Gaps = 5/141 (3%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M D R M+ + +++T EK + SLL G FR+ LPG PD V R V Sbjct: 1 MTDRLSPERRRYLMQQVRSKNTRPEKAVRSLLHSIGYRFRLHRKDLPGTPDIVFPSRRLV 60 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 +F HGCFWH H C + ++P +R ++W KI N RD+R + L GWRV +VW+C L Sbjct: 61 LFVHGCFWHGHGCRIGQLPKSRLDYWSPKIEANRARDQRKEAALAAEGWRVAVVWQCELS 120 Query: 121 GREKLTDEALTERLEEWICGE 141 AL RL + Sbjct: 121 D-----LGALEARLRNILDPS 136 >UniRef50_A5V0Q2 T/G mismatch-specific endonuclease n=3 Tax=Bacteria RepID=A5V0Q2_ROSS1 Length = 136 Score = 183 bits (464), Expect = 2e-45, Method: Composition-based stats. Identities = 56/129 (43%), Positives = 81/129 (62%), Gaps = 1/129 (0%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M DV + RS+ M + +T+ E+ + SL+ G FR+ LPG+PD V+ +++ V Sbjct: 1 MPDVFNPEERSRIMAKVRGENTSPERLVRSLIHKMGYRFRLNVKDLPGKPDIVLKKHKKV 60 Query: 61 IFTHGCFWHHH-HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 IF HGCFWH H C P++ TE+W +K+ +N+ RDR + +L+ LGW VLIVWEC Sbjct: 61 IFVHGCFWHQHEGCPHAARPSSNTEYWNKKLDRNMLRDREHMHKLEYLGWNVLIVWECET 120 Query: 120 RGREKLTDE 128 R REKL D+ Sbjct: 121 RDREKLVDK 129 >UniRef50_C9RP57 DNA mismatch endonuclease Vsr n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RP57_FIBSS Length = 168 Score = 183 bits (464), Expect = 2e-45, Method: Composition-based stats. Identities = 51/146 (34%), Positives = 75/146 (51%), Gaps = 5/146 (3%) Query: 7 KATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGC 66 TRS+ M+A+ + DT E + L G +R+ LPG PD V +Y IF +GC Sbjct: 23 PMTRSQMMQAVHSEDTKPEMIVRKALFEAGFRYRLHRRDLPGTPDIFVQKYGVAIFVNGC 82 Query: 67 FWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR-----G 121 FWH H C L P + + FW +K +N+ RD + L LG+RV IVWEC+LR Sbjct: 83 FWHQHGCKLTSRPKSNSAFWNDKFDRNIVRDIKTQHELSLLGYRVAIVWECSLRVEGVAD 142 Query: 122 REKLTDEALTERLEEWICGEGASAQI 147 + ERL ++I + + ++ Sbjct: 143 AGNMGAALTLERLIDFIKSDDETIEL 168 >UniRef50_A1U1D0 T/G mismatch-specific endonuclease n=2 Tax=Proteobacteria RepID=A1U1D0_MARAV Length = 137 Score = 182 bits (462), Expect = 3e-45, Method: Composition-based stats. Identities = 54/132 (40%), Positives = 75/132 (56%), Gaps = 3/132 (2%) Query: 6 DKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHG 65 RS+ MRA+ +RDT E + L GL + + D LPG PD V +YR V+F HG Sbjct: 4 TPEQRSRTMRAVRSRDTKPELTVRRFLHAAGLRYLLHDRRLPGSPDLVFPKYRTVVFVHG 63 Query: 66 CFWHHHH-CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREK 124 CFWH H C P T TE+W K+ +NVERD R+ + L+ GW VL++WEC +R R+ Sbjct: 64 CFWHQHPNCAAASRPQTNTEYWSRKLTRNVERDERNRAELEASGWTVLVIWECEIRKRDA 123 Query: 125 LTDEALTERLEE 136 + L + + Sbjct: 124 --LDRLAKAIRS 133 >UniRef50_A3PQ65 T/G mismatch-specific endonuclease n=1 Tax=Rhodobacter sphaeroides ATCC 17029 RepID=A3PQ65_RHOS1 Length = 144 Score = 181 bits (459), Expect = 8e-45, Method: Composition-based stats. Identities = 53/128 (41%), Positives = 66/128 (51%), Gaps = 1/128 (0%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M D RS+NM I RDT E R+ S G GL FR+ LPG PD V R Sbjct: 2 MTDSLTPDARSRNMAKIRGRDTGPEMRVRSAAHGLGLRFRLYRRGLPGTPDLVFPSRRVA 61 Query: 61 IFTHGCFWHHHH-CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 +F HGCFWH H C P +R +FW K NV RD R L+ GW+ + +WEC Sbjct: 62 LFVHGCFWHRHPGCRFAYTPKSRVDFWEAKFEGNVSRDLRKNEDLEAAGWKSVTIWECET 121 Query: 120 RGREKLTD 127 R +KL++ Sbjct: 122 REPDKLSE 129 >UniRef50_A3U5P6 DNA mismatch endonuclease Vsr, putative n=1 Tax=Croceibacter atlanticus HTCC2559 RepID=A3U5P6_9FLAO Length = 163 Score = 180 bits (458), Expect = 9e-45, Method: Composition-based stats. Identities = 44/157 (28%), Positives = 68/157 (43%), Gaps = 5/157 (3%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLA-FRVQDASLPGRPDFVVDEYRC 59 M+ + + + +MR ++ T E L L GL +R+ L G PD V + Sbjct: 1 MSLHINSKSVNTSMRGNKSKHTKPELLLRKALWASGLRGYRLHFKKLAGSPDIVFSTKKI 60 Query: 60 VIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 IF +GCFWH +P T TEFW +K N++RD+ + L W VL +WEC + Sbjct: 61 AIFVNGCFWHRCPKCNLNLPKTNTEFWKDKFDTNMKRDQNNYVTLIRSNWTVLTIWECDI 120 Query: 120 RGREKLTDEALTERLEEWICGEGASAQIDTQGIHLLA 156 + K + I A + + + L A Sbjct: 121 KKNLKEQVLKIE----SLIKDVNAYSITTNEPLQLAA 153 >UniRef50_Q31CG2 T/G mismatch-specific endonuclease n=5 Tax=Bacteria RepID=Q31CG2_PROM9 Length = 138 Score = 180 bits (456), Expect = 1e-44, Method: Composition-based stats. Identities = 51/125 (40%), Positives = 71/125 (56%), Gaps = 1/125 (0%) Query: 7 KATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGC 66 RS+NM AI +++T E + LL G FR+ LPG PD V+ +Y+ VIF HGC Sbjct: 10 SEQRSRNMSAIKSKNTKPEIAVRKLLHSMGFRFRLHRKDLPGSPDIVLPKYKTVIFVHGC 69 Query: 67 FWHHH-HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKL 125 FWH H +C P TR EFW K NV+RD +++ +GW+ +++WEC L + L Sbjct: 70 FWHRHENCKYASNPKTRKEFWKSKFKANVKRDLEIQEKIKNIGWQSVVIWECELTKIQYL 129 Query: 126 TDEAL 130 D L Sbjct: 130 KDTFL 134 >UniRef50_A2SSP3 T/G mismatch-specific endonuclease n=1 Tax=Methanocorpusculum labreanum Z RepID=A2SSP3_METLZ Length = 151 Score = 180 bits (456), Expect = 2e-44, Method: Composition-based stats. Identities = 51/136 (37%), Positives = 77/136 (56%), Gaps = 1/136 (0%) Query: 3 DVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIF 62 D RS M + ++ T E+ +AS L + +R LPG+PDFV+ +YR VIF Sbjct: 2 DRVTPEHRSWMMSRVRSKKTKPEQLVASYLRESHIGYRRCRTDLPGKPDFVLSKYRAVIF 61 Query: 63 THGCFWHHH-HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRG 121 +GCFWH H C +P T TE+W+ K +N RD R+ ++L+E+GWRV ++WEC L Sbjct: 62 VNGCFWHGHAGCKRATIPKTNTEWWIAKFQQNKLRDERNYAQLREMGWRVFVIWECELGN 121 Query: 122 REKLTDEALTERLEEW 137 + + L + + W Sbjct: 122 DVEYKLKELVKEMLLW 137 >UniRef50_Q64Q05 Putative very-short-patch-repair endonuclease n=4 Tax=Bacteroides RepID=Q64Q05_BACFR Length = 171 Score = 179 bits (454), Expect = 3e-44, Method: Composition-based stats. Identities = 55/155 (35%), Positives = 74/155 (47%), Gaps = 11/155 (7%) Query: 3 DVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIF 62 D+ +K RS M I +DT E + L +G +R LPG PD V+ +Y VIF Sbjct: 2 DIWNKKKRSAVMAKIKGKDTKPEWIVRRYLFSRGYRYRKNVKGLPGTPDIVLRKYGIVIF 61 Query: 63 THGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGR 122 HGCFWH H +P T EFW KI N RD R+ L+++GW V+IVWEC L+ Sbjct: 62 IHGCFWHGHEVD-GTMPKTNREFWKNKIEGNKLRDERNKEELRKMGWSVIIVWECQLK-- 118 Query: 123 EKLTDEALTER--------LEEWICGEGASAQIDT 149 + + L E LE + +I Sbjct: 119 PAVRQQTLLEIEYYINHTYLERFRPQPSMLYEIPE 153 >UniRef50_C4ZAA5 Very short patch repair endonuclease, putative n=6 Tax=Clostridiales RepID=C4ZAA5_EUBR3 Length = 155 Score = 179 bits (454), Expect = 3e-44, Method: Composition-based stats. Identities = 47/144 (32%), Positives = 69/144 (47%), Gaps = 3/144 (2%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 MADV K R KNM+ I +DT IE L L +G +R LPG PD V+ +Y+ Sbjct: 12 MADVLTKEQRHKNMKNIHGKDTKIEIILRKALWAKGYRYRKNYKKLPGNPDIVLTKYKIA 71 Query: 61 IFTHGCFWHHHHCYLFK---VPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWEC 117 IF G F+H + K + + FW+ KI KN ERD +L +GW V+ W Sbjct: 72 IFCDGEFFHGKDWEVLKPRLQKSNNSAFWVNKISKNRERDDMVNKKLLFMGWTVIRFWGK 131 Query: 118 ALRGREKLTDEALTERLEEWICGE 141 ++ +A+ E + + + Sbjct: 132 DIKKHTDECVKAIEEIIFDIKMED 155 >UniRef50_B8HDH1 DNA mismatch endonuclease Vsr n=4 Tax=Bacteria RepID=B8HDH1_ARTCA Length = 144 Score = 178 bits (453), Expect = 3e-44, Method: Composition-based stats. Identities = 47/136 (34%), Positives = 64/136 (47%), Gaps = 5/136 (3%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQ----DASLPGRPDFVVDE 56 MAD RS NM I ++T E + LL +G +R+ LPG PD V Sbjct: 1 MADRLTPEQRSWNMSRIRGKNTKPELLVRRLLHAKGYRYRLHGAARGGKLPGNPDLVFAG 60 Query: 57 YRCVIFTHGCFWHHHHCYLF-KVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVW 115 VIF +GCFWH H C + P FW +K + ERD +L++ GW VL +W Sbjct: 61 RHKVIFVNGCFWHFHDCRVGQHAPKANAGFWADKRNRTRERDAGQRRQLEDAGWEVLTIW 120 Query: 116 ECALRGREKLTDEALT 131 EC L+ L + + Sbjct: 121 ECELKDSSALESQLVQ 136 >UniRef50_C7RCX3 DNA mismatch endonuclease Vsr n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RCX3_KANKD Length = 151 Score = 178 bits (453), Expect = 4e-44, Method: Composition-based stats. Identities = 53/150 (35%), Positives = 77/150 (51%), Gaps = 3/150 (2%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M+ K +RS+ M I + DT E ++ + G + ++D +PD V+ + Sbjct: 1 MSSKSGKLSRSEMMSRIRSFDTKPEIKVRKAIYHLGYRYILKDKVKGTKPDIVLRKQGVA 60 Query: 61 IFTHGCFWHHH-HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 IF HGCFWH H C +P TR E+W K+ KNVERDR+ +LQ GWR+ ++WECA Sbjct: 61 IFVHGCFWHRHSGCKYASMPKTRREYWWPKLSKNVERDRKVNFKLQLEGWRIAVIWECAT 120 Query: 120 RGREKLTDEALTERLEEWICGEGASAQIDT 149 R +E E L EWI + + Sbjct: 121 RDKELF--EKTMNSLNEWIQSSSDYYESQS 148 >UniRef50_Q28ND8 T/G mismatch-specific endonuclease n=1 Tax=Jannaschia sp. CCS1 RepID=Q28ND8_JANSC Length = 156 Score = 178 bits (452), Expect = 4e-44, Method: Composition-based stats. Identities = 54/128 (42%), Positives = 68/128 (53%), Gaps = 1/128 (0%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M D+ TRS+ M +I R+T E + L G FR+ SLPG PD V+ ++R Sbjct: 1 MVDIVSAETRSRMMASIRRRNTKPEMVVRQELHAAGFRFRLDVRSLPGSPDIVLPKWRTA 60 Query: 61 IFTHGCFWHHH-HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 IF HGCFWH H C PATR +FW K NV RD + L E+GW+V IVWEC L Sbjct: 61 IFVHGCFWHRHAGCKYASTPATRPKFWQAKFEANVRRDCSNERALIEMGWKVAIVWECGL 120 Query: 120 RGREKLTD 127 + Sbjct: 121 AQGVRADT 128 >UniRef50_C5B599 DNA mismatch endonuclease vsr n=2 Tax=Methylobacterium RepID=C5B599_METEA Length = 150 Score = 178 bits (451), Expect = 6e-44, Method: Composition-based stats. Identities = 54/129 (41%), Positives = 63/129 (48%), Gaps = 1/129 (0%) Query: 3 DVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIF 62 D D A RS M I DT E + G FR+ SLPGRPD V R IF Sbjct: 2 DTLDPARRSALMGRIRGVDTGPEMAVRRAAHRLGYRFRLHRRSLPGRPDLVFPSRRAAIF 61 Query: 63 THGCFWHHH-HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRG 121 HGCFWH H C P TR EFW K +NVERD + RL GWRVL++WEC Sbjct: 62 VHGCFWHRHEGCSKASTPKTRVEFWQAKFARNVERDAQVQERLATAGWRVLVIWECETAR 121 Query: 122 REKLTDEAL 130 ++ + Sbjct: 122 AGEIDRILV 130 >UniRef50_D2LK67 DNA mismatch endonuclease Vsr n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LK67_RHOVA Length = 165 Score = 177 bits (450), Expect = 8e-44, Method: Composition-based stats. Identities = 58/151 (38%), Positives = 80/151 (52%), Gaps = 6/151 (3%) Query: 2 ADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVI 61 + + RS+ M+A+ + TA E + L G FRVQ LPG PD V+ +++ VI Sbjct: 12 SHLSVDPVRSRIMQAVGQKHTAPEMTVRRTLYALGYRFRVQRRDLPGSPDIVLRKHKTVI 71 Query: 62 FTHGCFWHHHH-CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 F HGCFWH H C +P TR EFW EK +NV RD+ L+++GW+VLIVWEC + Sbjct: 72 FVHGCFWHRHPLCKKATMPKTRLEFWTEKFDRNVARDQLTEIALRKMGWQVLIVWECETK 131 Query: 121 GREKLTDEALTERLEEWICGEGASAQIDTQG 151 + E L +L E + D G Sbjct: 132 -----SVEILAAKLASAFTAEAYPSDSDLSG 157 >UniRef50_B7GPI0 DNA mismatch endonuclease vsr n=12 Tax=cellular organisms RepID=B7GPI0_BIFLI Length = 171 Score = 177 bits (450), Expect = 9e-44, Method: Composition-based stats. Identities = 55/146 (37%), Positives = 79/146 (54%), Gaps = 3/146 (2%) Query: 2 ADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVI 61 + +++ TRS M I +DT IE + S L +GL FR D PG PD V+ +Y ++ Sbjct: 28 VEKYERGTRSYTMSHIRGKDTKIEVLVRSYLFRKGLRFRKNDKRYPGHPDVVLPKYHTIV 87 Query: 62 FTHGCFWHHH-HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 F +GCFWH H C +P + EFW K+ +N RD + L+ GWRV+ VWEC L Sbjct: 88 FVNGCFWHMHEGCSKHSMPKSNVEFWQAKLLRNHNRDIAQRAELEAAGWRVITVWECELT 147 Query: 121 GREKLTDEALTERLEEWICGEGASAQ 146 + DE L E+ + G+ SA+ Sbjct: 148 K--AVRDERLARLYEQIVEGDADSAE 171 >UniRef50_A4G657 Very short patch repair protein (DNA mismatch endonuclease) (Vsr mismatch endonuclease) n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G657_HERAR Length = 152 Score = 177 bits (449), Expect = 1e-43, Method: Composition-based stats. Identities = 52/136 (38%), Positives = 79/136 (58%), Gaps = 2/136 (1%) Query: 3 DVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIF 62 D+ D TRS+ M I +++T E+ + S L +G +R+ D LPG+PD V+ ++ VIF Sbjct: 2 DIVDSLTRSRMMAGIRSKNTLPERLVRSFLHARGFRYRIHDKKLPGKPDIVLPKHCVVIF 61 Query: 63 THGCFWHHHH-CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL-R 120 HGCFWH H C P T ++ W++K N ERD+R++ L+ LGWRV+++WEC L R Sbjct: 62 IHGCFWHQHPACKNAVKPKTNSQKWIQKFSDNEERDQRNLLALKALGWRVIVLWECGLGR 121 Query: 121 GREKLTDEALTERLEE 136 L + + Sbjct: 122 KISDDQLGWLPDAIRS 137 >UniRef50_A4ANX8 Putative very-short-patch-repair endonuclease n=1 Tax=Flavobacteriales bacterium HTCC2170 RepID=A4ANX8_9FLAO Length = 160 Score = 176 bits (447), Expect = 2e-43, Method: Composition-based stats. Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 1/133 (0%) Query: 5 HDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTH 64 + RSK M I ++T E L G +RV L GRPD V+++Y+ V+F Sbjct: 22 YTTPERSKIMSKIRGKNTKPELAFRKALWAIGYRYRVDSRKLIGRPDIVLNKYKTVVFID 81 Query: 65 GCFWHHHHCYLFKVP-ATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGRE 123 G FWH H+ K + +FW+ KI +N +RD L + G++V WE ++ Sbjct: 82 GEFWHGHNWEERKHKIKSNRDFWIAKIERNQQRDAEVNLALGQQGYKVFRFWEHQIKKEL 141 Query: 124 KLTDEALTERLEE 136 + + + L++ Sbjct: 142 DECLQKVIDHLQK 154 >UniRef50_C5APE9 Very-short-patch-repair endonuclease n=1 Tax=Methylobacterium extorquens AM1 RepID=C5APE9_METEA Length = 146 Score = 176 bits (447), Expect = 2e-43, Method: Composition-based stats. Identities = 51/143 (35%), Positives = 73/143 (51%), Gaps = 8/143 (5%) Query: 7 KATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGC 66 R K M AI ++DT E+ + L G FR+ LPGRPD R IF HGC Sbjct: 7 PEARRKIMSAIRSKDTKPERSVRRLAHSLGYRFRLHGKDLPGRPDIFFPGRRKAIFVHGC 66 Query: 67 FWHHHH---CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGRE 123 FWH H C +P TR ++W+ K+ +NV RD R+++ L GW L++WEC L Sbjct: 67 FWHQHPSDECRPSALPRTRRDYWVPKLERNVARDARNMTDLAAAGWDALVIWECELSD-- 124 Query: 124 KLTDEALTERLEEWICGEGASAQ 146 EA+ +RL ++ + + Sbjct: 125 ---LEAVADRLRRFLGDSAIARR 144 >UniRef50_C9PU27 Putative uncharacterized protein n=1 Tax=Prevotella sp. oral taxon 472 str. F0295 RepID=C9PU27_9BACT Length = 159 Score = 176 bits (447), Expect = 2e-43, Method: Composition-based stats. Identities = 48/140 (34%), Positives = 72/140 (51%), Gaps = 2/140 (1%) Query: 14 MRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHH-H 72 M ++ ++ T E + L QG +R+ LPG PD V+ +YR IF +GCFWH H Sbjct: 1 MASVKSKGTKPELLVRKFLWAQGFRYRLNSDRLPGHPDLVLRKYRTCIFVNGCFWHGHEG 60 Query: 73 CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREK-LTDEALT 131 C + +P T T FW +K+ +N +RD +L +GW L+VWEC LR R + T +A+ Sbjct: 61 CKRWTLPKTNTPFWEKKVKRNQQRDAETQRQLARMGWHCLVVWECQLRPRHRQATLQAIA 120 Query: 132 ERLEEWICGEGASAQIDTQG 151 L + + Q Sbjct: 121 HTLNHILLTDYQLRYALPQP 140 >UniRef50_B9E7L5 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E7L5_MACCJ Length = 175 Score = 175 bits (444), Expect = 4e-43, Method: Composition-based stats. Identities = 55/138 (39%), Positives = 80/138 (57%), Gaps = 3/138 (2%) Query: 4 VHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFT 63 V ++ T +K M A + + + E + L +G+ +R D PG PD + +Y+ +F Sbjct: 41 VMEEHTLNKTMVANSKKKSKPEDIVRKFLYSKGIRYRKNDKRFPGSPDIYIPKYKTAVFV 100 Query: 64 HGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGRE 123 +GCFWH H+C LF +P + EFW +K +NV RD R+I L ELG RV++VWEC L+ E Sbjct: 101 NGCFWHVHNCDLFVMPKSNQEFWEKKFNRNVSRDERNIEELTELGIRVIVVWECGLKPLE 160 Query: 124 KLTDEALTERLEEWICGE 141 + E E L E I GE Sbjct: 161 R---EETLEALYEMIIGE 175 >UniRef50_Q2SAF1 DNA G:T-mismatch repair endonuclease n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SAF1_HAHCH Length = 140 Score = 174 bits (442), Expect = 7e-43, Method: Composition-based stats. Identities = 38/135 (28%), Positives = 60/135 (44%), Gaps = 2/135 (1%) Query: 2 ADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVI 61 DV R M I ++T E L L GL +R+Q + GRPD + + + Sbjct: 5 TDVLTPEQRKLCMSKIRGKNTKPELLLRKALWSIGLRYRLQGK-ITGRPDLIFSGPKVAV 63 Query: 62 FTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRG 121 F GCFWH + + P FW EK+ +N+ RD+ L + GW V+ +WE ++ Sbjct: 64 FVDGCFWHGCPEHY-RTPQNNQAFWKEKLRRNMCRDKAVNRILVDNGWLVVRLWEHEVKS 122 Query: 122 REKLTDEALTERLEE 136 + + L + Sbjct: 123 DLECCVSRILAALRK 137 >UniRef50_A4L312 V.TspMI n=2 Tax=Thermus RepID=A4L312_9DEIN Length = 138 Score = 173 bits (438), Expect = 2e-42, Method: Composition-based stats. Identities = 46/132 (34%), Positives = 61/132 (46%), Gaps = 1/132 (0%) Query: 3 DVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIF 62 D+ RS+ MR + T T E +L LL G+ +LPGRPD V + + IF Sbjct: 2 DIFTPEKRSELMRKVKTSSTGPEVKLRRLLRVAGIRGYRIKNNLPGRPDVVFPKRKVAIF 61 Query: 63 THGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGR 122 GCFWH K P T EFW KI +N +RD R L GW V+ +WE L+ Sbjct: 62 VDGCFWHGCPVCN-KKPKTNAEFWRRKIKENRQRDARVDELLARQGWSVVRIWEHELKKA 120 Query: 123 EKLTDEALTERL 134 + + L Sbjct: 121 PQEAVARVIGAL 132 >UniRef50_B5JQD1 DNA mismatch endonuclease Vsr family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JQD1_9BACT Length = 153 Score = 172 bits (436), Expect = 3e-42, Method: Composition-based stats. Identities = 49/148 (33%), Positives = 75/148 (50%), Gaps = 11/148 (7%) Query: 14 MRAIATRDTAIEKRLASLLTGQGLAFRVQ---DASLPGRPDFVVDEYRCVIFTHGCFWHH 70 M + ++ T E+ + SLL G F V + +LPGRPD V+ + VIF HGCFWH Sbjct: 1 MSRVTSKHTKPERLVRSLLHRIGYRFTVNGPKNKNLPGRPDIVLPSRQAVIFVHGCFWHR 60 Query: 71 H-HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEA 129 H C P + T +WL+K +N++RDR+ L +LGW+V+ +WEC L+ + + Sbjct: 61 HTGCKSATTPKSNTSYWLKKFERNIQRDRQTRQALVKLGWQVITIWECELKDLDAVAAHL 120 Query: 130 LTER-------LEEWICGEGASAQIDTQ 150 + L E I + A+ Sbjct: 121 IAALPRSPQFDLPEEIEDDKLVAETQAS 148 >UniRef50_D2BGG7 Vsr domain protein T:G mismatch repair endonuclease n=1 Tax=Dehalococcoides sp. VS RepID=D2BGG7_DEHSV Length = 138 Score = 171 bits (433), Expect = 8e-42, Method: Composition-based stats. Identities = 44/131 (33%), Positives = 70/131 (53%), Gaps = 2/131 (1%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M D RS M I +DT +E R+ S L QGL FR LPG+PD V + + Sbjct: 1 MPDNLTPEQRSYCMSRIKGKDTGLEMRVRSALHEQGLRFRKNVKWLPGKPDIVFSKAKVA 60 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 +F G FWH + L++ + +FW +KI KN ERD ++ +L+ +GW V+ +W+ ++ Sbjct: 61 VFVDGDFWHGYRFPLWQNKVS--DFWKKKISKNRERDIKNHRKLRRMGWTVIRLWQHEIQ 118 Query: 121 GREKLTDEALT 131 + + E + Sbjct: 119 KNFEASIERIL 129 >UniRef50_Q12VT6 DNA mismatch (G:T) repair endonuclease n=1 Tax=Methanococcoides burtonii DSM 6242 RepID=Q12VT6_METBU Length = 150 Score = 171 bits (433), Expect = 9e-42, Method: Composition-based stats. Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 1/137 (0%) Query: 2 ADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGL-AFRVQDASLPGRPDFVVDEYRCV 60 A + S+ M A +DT E L L G+ +R+ +PGRPD + Sbjct: 12 APIPKSKITSRVMSANVGKDTKPELLLRKALRYIGIPGYRLHWKKVPGRPDITYPGGKIA 71 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 IF +GC+WH +P + T+FW EK +N ERD +I L+ GW+++++WEC ++ Sbjct: 72 IFVNGCYWHRCPYCNLPLPKSHTDFWAEKFKRNKERDDENIRLLKAEGWKIIVLWECEIK 131 Query: 121 GREKLTDEALTERLEEW 137 E + + + Sbjct: 132 RDVMECAERVRNLVCKI 148 >UniRef50_A5EB61 T/G mismatch-specific endonuclease n=2 Tax=Bradyrhizobiaceae RepID=A5EB61_BRASB Length = 147 Score = 170 bits (432), Expect = 1e-41, Method: Composition-based stats. Identities = 48/127 (37%), Positives = 67/127 (52%), Gaps = 1/127 (0%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M D + RS M I +DT E R+ ++ GL FR+ L G PD V +++ Sbjct: 1 MMDRLTSSQRSAVMARIQGKDTTPEMRVRTIAHAMGLRFRLHRGDLKGTPDLVFPKHKTA 60 Query: 61 IFTHGCFWHHHH-CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 +F HGCFWH H C +P TR EFW +K+ +NV RD +L GWRV I+WEC Sbjct: 61 LFVHGCFWHRHPGCKRASMPQTREEFWRKKLAQNVARDAEATLQLSSEGWRVQIIWECET 120 Query: 120 RGREKLT 126 + ++ Sbjct: 121 KDPAQIR 127 >UniRef50_A1A2S3 Possible XorII very-short-patch-repair endonuclease n=10 Tax=Bifidobacterium RepID=A1A2S3_BIFAA Length = 177 Score = 170 bits (432), Expect = 1e-41, Method: Composition-based stats. Identities = 57/151 (37%), Positives = 83/151 (54%), Gaps = 5/151 (3%) Query: 2 ADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVI 61 + +++ TRS M I +DT+IE+ + S L +GL FR D PG PD V+ +YR +I Sbjct: 30 PEKYERGTRSYTMSHIRGKDTSIERMVRSFLFAKGLRFRKNDKRYPGHPDVVLPKYRTII 89 Query: 62 FTHGCFWHHH-HCYLF-KVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 F +GCFWH H C +VP + EFW K+ +N ERD R + L+ GW+V++VWEC L Sbjct: 90 FVNGCFWHMHEGCPKATRVPKSNVEFWTAKLLRNHERDARQRAELEADGWKVIVVWECEL 149 Query: 120 RGREKLTDEALTERLEEWICGEGASAQIDTQ 150 + + ERL I + A + Sbjct: 150 GKKVRDER---LERLYREIVDDSGKADDSGE 177 >UniRef50_C9MXV4 Patch repair protein n=2 Tax=Leptotrichia hofstadii F0254 RepID=C9MXV4_9FUSO Length = 193 Score = 170 bits (431), Expect = 1e-41, Method: Composition-based stats. Identities = 48/149 (32%), Positives = 74/149 (49%), Gaps = 2/149 (1%) Query: 7 KATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGC 66 TRS+NM I +++T E + LL G +RV + LPG PD + +Y IF +GC Sbjct: 36 PLTRSQNMARIKSKNTKPEIYIRKLLYKMGYRYRVNYSELPGTPDIFILKYNTAIFVNGC 95 Query: 67 FWHHH-HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKL 125 FWH H +C + P T E+W +K +NVERD +L E+ V+ +WEC + R + Sbjct: 96 FWHRHENCKVATFPKTHAEYWEKKFRRNVERDIEVREKLFEMDISVITIWECEI-NRMRK 154 Query: 126 TDEALTERLEEWICGEGASAQIDTQGIHL 154 +E + L + + I + Sbjct: 155 NEEYKEKYLRVLRDRIERVFNYEEEDISV 183 >UniRef50_UPI00016AF703 DNA mismatch endonuclease vsr n=2 Tax=pseudomallei group RepID=UPI00016AF703 Length = 146 Score = 170 bits (430), Expect = 2e-41, Method: Composition-based stats. Identities = 54/131 (41%), Positives = 73/131 (55%), Gaps = 6/131 (4%) Query: 11 SKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHH 70 S+ MR I +RDTA E + L G +R+ SLPG PD V R +F HGCFWH Sbjct: 22 SERMRRIRSRDTAPEWIVRRTLWRMGYRYRLHVKSLPGTPDIVFARRRKALFVHGCFWHQ 81 Query: 71 HHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEAL 130 H C L +P T ++W K+ +N+ERD + +L++ GW VL+VWEC E L Sbjct: 82 HGCSLTNLPKTNIDYWHPKLHRNIERDAAAMLQLEKAGWSVLVVWECE------SALEDL 135 Query: 131 TERLEEWICGE 141 ERL ++ GE Sbjct: 136 PERLRLFLDGE 146 >UniRef50_A3ZZ75 Patch repair protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZZ75_9PLAN Length = 146 Score = 170 bits (430), Expect = 2e-41, Method: Composition-based stats. Identities = 50/144 (34%), Positives = 75/144 (52%), Gaps = 5/144 (3%) Query: 2 ADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVI 61 D+ D TRS+ MR + + DT E+ + SL G FR+ LPG PD VI Sbjct: 5 TDIFDPETRSEIMRRVRSSDTRPERIVRSLAHRLGYRFRLGRRDLPGSPDLTFPGRGKVI 64 Query: 62 FTHGCFWHHHHCYLFK--VPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 F HGCFWH H C + +P ++W +K+ +N +RDR+ + L++LGW+ LIVWEC Sbjct: 65 FVHGCFWHQHDCARGRRPLPKQNADYWRKKLSRNQQRDRQTLKSLRKLGWKTLIVWECET 124 Query: 120 RGREKLTDEALTERLEEWICGEGA 143 + L ++L ++ Sbjct: 125 KQGN---WPRLAQKLNRFLAASSK 145 >UniRef50_C4RRL0 XorII-short-patch-repair endonuclease n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RRL0_9ACTO Length = 155 Score = 169 bits (429), Expect = 2e-41, Method: Composition-based stats. Identities = 47/144 (32%), Positives = 71/144 (49%), Gaps = 3/144 (2%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLA-FRVQDASLPGRPDFVVDEYRC 59 M D +A RS+ M AI +++T E L L G+ +R+ ASLPG+PD +R Sbjct: 13 MPDHLSRAGRSRVMAAIRSKNTKPELMLRQALRTSGVTGYRIHLASLPGKPDIAFTRWRL 72 Query: 60 VIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 IF G FWH H + P + +W EKI +N ERD R+ + L +GW VL VW+ + Sbjct: 73 AIFVDGVFWHGHPDHF--KPQLASPYWREKIARNQERDMRNDAALAAIGWTVLRVWDTQV 130 Query: 120 RGREKLTDEALTERLEEWICGEGA 143 + + + + L + Sbjct: 131 KEDLGGVTQRVADALRALGRPDVP 154 >UniRef50_A0LM24 T/G mismatch-specific endonuclease n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LM24_SYNFM Length = 129 Score = 168 bits (427), Expect = 4e-41, Method: Composition-based stats. Identities = 49/131 (37%), Positives = 70/131 (53%), Gaps = 6/131 (4%) Query: 14 MRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHH-H 72 M I +T E + L G FR+ + LPG+PD V+ +++ IF HGCFWH H Sbjct: 1 MSRIHGTNTKPELEVRRRLHSMGFRFRLHCSKLPGKPDIVLPKHKKAIFVHGCFWHGHQG 60 Query: 73 CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTE 132 C K P++ +FW KI K VERDR + L ELGW+ L +W C ++ E L + Sbjct: 61 CKRSKPPSSNVQFWTAKIAKTVERDRNNRKALVELGWQALTIWSCEIKN-----TEFLEK 115 Query: 133 RLEEWICGEGA 143 RL E++ + Sbjct: 116 RLREFLDDPAS 126 >UniRef50_Q027Y0 T/G mismatch-specific endonuclease n=2 Tax=Acidobacteria RepID=Q027Y0_SOLUE Length = 138 Score = 168 bits (427), Expect = 4e-41, Method: Composition-based stats. Identities = 51/123 (41%), Positives = 69/123 (56%), Gaps = 1/123 (0%) Query: 3 DVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIF 62 D RS NMR I +RDT+ E + L+ G FR+ A+LPG+PD V+ + +I Sbjct: 2 DSISPERRSANMRRIRSRDTSPEIAVRRLVHSMGFRFRLHVATLPGKPDIVLPRLKRIIE 61 Query: 63 THGCFWHHHH-CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRG 121 GCFWH H C +P +RTE+W K+ KN RD ++++L GW L VWEC L Sbjct: 62 VRGCFWHQHPGCIDSHIPKSRTEYWESKLTKNQRRDEENLAKLTAAGWTALTVWECQLSD 121 Query: 122 REK 124 EK Sbjct: 122 SEK 124 >UniRef50_B0TCI0 DNA mismatch endonuclease vsr, putative n=5 Tax=Clostridiales RepID=B0TCI0_HELMI Length = 153 Score = 168 bits (426), Expect = 5e-41, Method: Composition-based stats. Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 1/137 (0%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M + R NM I +++T IE L +G+ +R LPG+PD + +Y+ Sbjct: 1 MVHRTQEEQRHYNMSRIRSKNTRIETVFRKALWREGINYRKNYQLLPGKPDIAITKYKIA 60 Query: 61 IFTHGCFWHHHHCYLFKVP-ATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 IF G FWH + K ++W++KI KN+ERD +L+ +GWRVL W + Sbjct: 61 IFCDGEFWHGKDWEIKKPKIKNNRDYWIQKIEKNMERDIEIDQQLKSMGWRVLRFWGRDI 120 Query: 120 RGREKLTDEALTERLEE 136 + + + E + + Sbjct: 121 VKNLEDCIKTVKETIFQ 137 >UniRef50_Q1IIN5 T/G mismatch-specific endonuclease n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IIN5_ACIBL Length = 144 Score = 168 bits (425), Expect = 6e-41, Method: Composition-based stats. Identities = 61/135 (45%), Positives = 78/135 (57%), Gaps = 2/135 (1%) Query: 3 DVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIF 62 D KA RS NM I +T E + SLL G FR+ + +LPGRPD + +YR ++ Sbjct: 2 DSLSKARRSWNMSRIRATNTNPELIVRSLLHRLGFRFRLHERTLPGRPDLTLKKYRSIVL 61 Query: 63 THGCFWHHH-HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRG 121 HGCFWH H C P + T FW +K NVERDRR+I L+ LGW+V+IVWEC R Sbjct: 62 VHGCFWHRHAGCPFAYTPKSNTIFWNKKFKANVERDRRNIHELRRLGWKVIIVWECQTRY 121 Query: 122 REKLTDEALTERLEE 136 E+L+ L RL Sbjct: 122 GERLS-RRLESRLRS 135 >UniRef50_C9S232 DNA mismatch endonuclease Vsr n=2 Tax=Geobacillus RepID=C9S232_GEOSY Length = 141 Score = 168 bits (425), Expect = 6e-41, Method: Composition-based stats. Identities = 41/140 (29%), Positives = 76/140 (54%), Gaps = 2/140 (1%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 ++D K RS+ M+AI +R + +E ++ L +G FR D +L G+PD + +Y+ V Sbjct: 4 LSDNLTKEQRSRTMKAIKSR-SQLEDVVSKALWREGYRFRKNDKTLLGKPDISIKKYKVV 62 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 IF CFWH + +P + ++W +K+ +N ERD+ +++GW L +WE L+ Sbjct: 63 IFIDSCFWHGCPLH-GNMPESNRDYWEKKLSRNKERDQEVNDYYRKIGWNCLRIWEHDLK 121 Query: 121 GREKLTDEALTERLEEWICG 140 T + + +++ + G Sbjct: 122 QDFDQTIKQIKNFIDQAMDG 141 >UniRef50_B1J232 DNA mismatch endonuclease Vsr n=7 Tax=Bacteria RepID=B1J232_PSEPW Length = 167 Score = 168 bits (425), Expect = 7e-41, Method: Composition-based stats. Identities = 55/126 (43%), Positives = 69/126 (54%), Gaps = 1/126 (0%) Query: 4 VHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFT 63 ++ T S MR I T E + LL GL FR+ SLPG PD V+ + R V+F Sbjct: 22 TMNQFTASDRMRLIKREHTQPELVVRRLLHSMGLRFRLHSKSLPGSPDVVLPKRRTVVFV 81 Query: 64 HGCFWHHHH-CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGR 122 HGC+WH H C P TR +FWL K NVERD R +L+ELGWRV++VWEC + Sbjct: 82 HGCYWHRHPGCRYASTPKTRQDFWLPKFASNVERDNRKAEQLRELGWRVVVVWECETKDV 141 Query: 123 EKLTDE 128 L Sbjct: 142 MSLDAR 147 >UniRef50_C4FAH6 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FAH6_9ACTN Length = 276 Score = 167 bits (424), Expect = 8e-41, Method: Composition-based stats. Identities = 48/135 (35%), Positives = 70/135 (51%), Gaps = 2/135 (1%) Query: 4 VHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLA-FRVQDASLPGRPDFVVDEYRCVIF 62 V +A K+M+ RDT E + L GL +R+ A PGRPD + IF Sbjct: 139 VKRRAAVRKSMQGNKRRDTKPELLVRQRLRAAGLTGYRLDWAKAPGRPDIAFPGRKIAIF 198 Query: 63 THGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR-G 121 +GC+WH +P+ EFW K +NVERD+R ++ L+ELGW + +WEC L+ Sbjct: 199 VNGCYWHRCPHCNPSMPSKNVEFWEAKFRRNVERDKRALAELEELGWCAITIWECELKRD 258 Query: 122 REKLTDEALTERLEE 136 R T E + E + + Sbjct: 259 RIDETMERVIEAIHK 273 >UniRef50_C7N4R6 T/G mismatch-specific endonuclease n=3 Tax=Coriobacteriaceae RepID=C7N4R6_SLAHD Length = 146 Score = 167 bits (423), Expect = 1e-40, Method: Composition-based stats. Identities = 46/134 (34%), Positives = 69/134 (51%), Gaps = 3/134 (2%) Query: 7 KATRSKNMRAIATRDTAIEKRLASLLTGQGL-AFRVQDASLPGRPDFVVDEYRCVIFTHG 65 K+M + ++T E + L GL +RV +PG PD + IF HG Sbjct: 12 SPAVHKSMTSNKGKNTKPELLVRKRLREDGLLGYRVHWK-VPGHPDVAWPGKKVAIFVHG 70 Query: 66 CFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGRE-K 124 CFWH VP T E+W+ K +NVERDR +I++L+ GWRV ++WEC L+ + + Sbjct: 71 CFWHRCPHCQLPVPKTNQEYWIPKFERNVERDRENIAKLESDGWRVHVIWECELKKKNVE 130 Query: 125 LTDEALTERLEEWI 138 T + L L + + Sbjct: 131 ATFDTLLPELHKEL 144 >UniRef50_A9ADY1 DNA mismatch endonuclease Vsr n=2 Tax=Burkholderia multivorans ATCC 17616 RepID=A9ADY1_BURM1 Length = 147 Score = 166 bits (422), Expect = 1e-40, Method: Composition-based stats. Identities = 46/128 (35%), Positives = 62/128 (48%), Gaps = 2/128 (1%) Query: 7 KATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGC 66 K T+S+ M + +R+TA E L L QGL +R+ LPG PD R IF GC Sbjct: 18 KLTKSEQMARVRSRNTAPELALRRALWHQGLRYRL-TPKLPGTPDLCFVTKRVAIFVDGC 76 Query: 67 FWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLT 126 FWH + PA EFW K+ N+ RDR+ + L+ GW V+ VWE L+ Sbjct: 77 FWHGCPQHY-SAPAQNAEFWSHKVASNITRDRKADAALEAEGWTVMRVWEHELKSHLADV 135 Query: 127 DEALTERL 134 + L Sbjct: 136 VARIEALL 143 >UniRef50_C7DGF8 DNA mismatch endonuclease Vsr n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DGF8_9EURY Length = 133 Score = 166 bits (420), Expect = 3e-40, Method: Composition-based stats. Identities = 41/136 (30%), Positives = 65/136 (47%), Gaps = 3/136 (2%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M D + RS NM I +R+T E +L L G + Q + G+PDF + + Sbjct: 1 MTDFLTNSQRSFNMSKIRSRNTVPELKLRRALRKLGFIY--QPKHIFGKPDFANKKSKIA 58 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 +F GCFWH + P T + FW +KI KN+ RDR+ L++ G++V WE + Sbjct: 59 VFIDGCFWHGCPYHYIT-PKTNSAFWSQKIKKNIARDRKVGKTLKKEGYKVFRYWEHTVE 117 Query: 121 GREKLTDEALTERLEE 136 L+ +++ Sbjct: 118 RNPDKILLTLSHAVQK 133 >UniRef50_Q8EL90 Very-short-patch-repair endonuclease n=3 Tax=Bacillaceae RepID=Q8EL90_OCEIH Length = 140 Score = 165 bits (419), Expect = 4e-40, Method: Composition-based stats. Identities = 39/135 (28%), Positives = 70/135 (51%), Gaps = 2/135 (1%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M+D+ K RS NM+AI + + +E ++ L +G FR +L G+PD + +Y+ V Sbjct: 1 MSDIMTKQQRSNNMKAIKSV-SKLESIVSKKLWARGFRFRRNTQNLFGKPDISIKKYKIV 59 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 IF CFWH + +P + T++W +K+ +N ERD+ + + GW + +WE ++ Sbjct: 60 IFIDSCFWHQCPLH-ANMPKSHTDYWEKKLERNKERDQEVNNYYSDKGWYLKRIWEHEIK 118 Query: 121 GREKLTDEALTERLE 135 + E + Sbjct: 119 NDIDKVIQDTAEFIT 133 >UniRef50_C6BBA5 DNA mismatch endonuclease Vsr n=1 Tax=Ralstonia pickettii 12D RepID=C6BBA5_RALP1 Length = 131 Score = 165 bits (417), Expect = 5e-40, Method: Composition-based stats. Identities = 47/108 (43%), Positives = 57/108 (52%), Gaps = 1/108 (0%) Query: 14 MRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHH- 72 MR + + DT E + S L G FR+ D LPG PD V + IF HGCFWH H Sbjct: 1 MRRVRSADTRPEMVVRSTLHRLGYRFRLHDKRLPGSPDIVFRSRKIAIFVHGCFWHRHPG 60 Query: 73 CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 C P T TEFW K KN+ RD ++L LGW +VWEC L+ Sbjct: 61 CSRATTPRTNTEFWQCKFNKNIARDTEVCTKLHALGWTTYVVWECELK 108 >UniRef50_C7V3C2 Putative uncharacterized protein n=1 Tax=Enterococcus faecalis T11 RepID=C7V3C2_ENTFA Length = 145 Score = 163 bits (413), Expect = 2e-39, Method: Composition-based stats. Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 3/133 (2%) Query: 6 DKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHG 65 K RSK M I + E LA + +G + LPG+PD + +Y+ IF G Sbjct: 4 TKEYRSKMMSKIRSTGGKAETLLAKRIWHEGYRYFRNYKKLPGKPDIAITKYKIAIFVDG 63 Query: 66 CFWHHHHCYLFKVP--ATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWE-CALRGR 122 FWH + K+ T ++W+ KI KN+ +D++ L+ +GW V+ WE + Sbjct: 64 EFWHGYDWDNQKLKRIHTNRDYWIPKIEKNMAKDKQVNEELRNMGWIVIRFWEKHEVLKN 123 Query: 123 EKLTDEALTERLE 135 + E + Sbjct: 124 INECVLEVKEAIA 136 >UniRef50_UPI0001968FCC hypothetical protein BACCELL_03936 n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=UPI0001968FCC Length = 150 Score = 162 bits (411), Expect = 3e-39, Method: Composition-based stats. Identities = 45/135 (33%), Positives = 61/135 (45%), Gaps = 1/135 (0%) Query: 3 DVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIF 62 D K RSKNM+AI + T E LA L GL +R D S+ G+PD Y+ IF Sbjct: 2 DKLTKEQRSKNMQAIKNKGTKDEVLLAKKLWHIGLRYRKNDNSVFGKPDLTFKRYKIAIF 61 Query: 63 THGCFWHHHHCYLFKVP-ATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRG 121 F+H K + EFW KI +N+ RD L+ GW+V+ W ++R Sbjct: 62 IDSEFFHGKDWETEKYKIKSNREFWWPKIERNITRDITVNQVLENAGWKVIRFWSKSMRK 121 Query: 122 REKLTDEALTERLEE 136 E + L E Sbjct: 122 NINACVETIMHILIE 136 >UniRef50_A1K2B8 Putative hypothetical very short patch repair endonuclease n=1 Tax=Azoarcus sp. BH72 RepID=A1K2B8_AZOSB Length = 129 Score = 162 bits (410), Expect = 3e-39, Method: Composition-based stats. Identities = 39/130 (30%), Positives = 56/130 (43%), Gaps = 1/130 (0%) Query: 13 NMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHH 72 M I RDT E L + GL +R+Q RPD V R +F GCFWH Sbjct: 1 MMSRIKGRDTGPELSLRRNIWALGLRYRLQYRIGRTRPDMVFVRARLAVFVDGCFWHGCP 60 Query: 73 CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTE 132 + +P +FW K+ +N ERD + L+ GWRVL +WE ++ + Sbjct: 61 QH-STMPKNNRDFWERKLRRNRERDAENTHSLEAEGWRVLRLWEHEIQASPADCARRIAV 119 Query: 133 RLEEWICGEG 142 L + + Sbjct: 120 MLGKAEESKA 129 >UniRef50_C8WJH8 DNA mismatch endonuclease Vsr n=2 Tax=Coriobacteriaceae RepID=C8WJH8_EGGLE Length = 190 Score = 161 bits (408), Expect = 6e-39, Method: Composition-based stats. Identities = 45/135 (33%), Positives = 66/135 (48%), Gaps = 3/135 (2%) Query: 6 DKATRSKNMRAIATRDTAIEKRLASLLTGQGLA-FRVQDASLPGRPDFVVDEYRCVIFTH 64 K+M+ +T E + L GL +R+Q +PG PD R +F + Sbjct: 50 SNEAVRKSMKGNKRSNTKPELLVRERLRAAGLTGYRLQWK-VPGHPDVAWPGKRVALFVN 108 Query: 65 GCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGRE- 123 GCFWH +P + E+W+ K +NVERD R + L+ELGW V ++WEC L+ + Sbjct: 109 GCFWHRCPHCKPSMPKSNVEYWVVKFERNVERDERSRAALEELGWTVHVIWECQLKKKTI 168 Query: 124 KLTDEALTERLEEWI 138 T AL L E + Sbjct: 169 DDTFAALLPALAEEL 183 >UniRef50_Q1D6D6 Very short patch repair protein n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1D6D6_MYXXD Length = 182 Score = 160 bits (406), Expect = 1e-38, Method: Composition-based stats. Identities = 52/135 (38%), Positives = 69/135 (51%), Gaps = 3/135 (2%) Query: 10 RSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWH 69 RS+ M I RDT+ E+ L S L GL FR+ + GRPD V ++ +F GCFWH Sbjct: 5 RSEQMSRIRGRDTSPERLLRSALWRAGLRFRLHTRTTHGRPDVVFPRHKVAVFIDGCFWH 64 Query: 70 HHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEA 129 + + P TR EFW K+ +NVERDRR L+E GWRV WE + E Sbjct: 65 GCPKHYVR-PRTRDEFWSSKLRENVERDRRQTLLLEEGGWRVCRFWEHQIFESLAEVVEW 123 Query: 130 LTERLE--EWICGEG 142 + + L+ EW Sbjct: 124 VRQALQDGEWTPSAS 138 >UniRef50_B8G3L1 DNA mismatch endonuclease Vsr n=1 Tax=Chloroflexus aggregans DSM 9485 RepID=B8G3L1_CHLAD Length = 138 Score = 160 bits (405), Expect = 1e-38, Method: Composition-based stats. Identities = 46/138 (33%), Positives = 69/138 (50%), Gaps = 2/138 (1%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLA-FRVQDASLPGRPDFVVDEYRC 59 M+D R K M+A+ + T +EKRL ++L G GL ++ ++ G+PD R Sbjct: 1 MSDNLSPQDRHKTMQAVKGKGTRLEKRLWAMLAGLGLKGWKKNADNIVGKPDVAFLNQRI 60 Query: 60 VIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 IF GCFWH K+P T E+W KI +N+E R +LQ GW V+ +WE + Sbjct: 61 AIFIDGCFWHGCPYCKRKLPKTNREYWERKINRNIELARLHDEQLQREGWIVIRIWEHEM 120 Query: 120 RGREKLTDEALTERLEEW 137 EK+ + L + Sbjct: 121 ADIEKVRA-RIRNLLSDM 137 >UniRef50_Q04A40 T/G mismatch-specific endonuclease n=3 Tax=Bacteria RepID=Q04A40_LACDB Length = 140 Score = 160 bits (405), Expect = 1e-38, Method: Composition-based stats. Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 1/127 (0%) Query: 6 DKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHG 65 SK M + + + E + +L G+ +R LPG+PD + +Y+ +F G Sbjct: 7 TDPRTSKRMSKVHSTEGKDEVIIRKILWKNGIHYRKNYKDLPGKPDIALTKYKVAVFIDG 66 Query: 66 CFWHHHHCY-LFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREK 124 FWH + K + ++W+ KI +N++RD+ ++L+E+GW VL W + + Sbjct: 67 EFWHGYDWENYKKHIESNRDYWIPKIERNMKRDQEVNAKLKEMGWTVLRFWSKQVLKNPE 126 Query: 125 LTDEALT 131 E + Sbjct: 127 YYAELIM 133 >UniRef50_C0EI85 Putative uncharacterized protein n=2 Tax=Clostridium RepID=C0EI85_9CLOT Length = 141 Score = 160 bits (404), Expect = 2e-38, Method: Composition-based stats. Identities = 42/124 (33%), Positives = 65/124 (52%), Gaps = 2/124 (1%) Query: 1 MADVHDKATRSKNMRAIATRDTA-IEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRC 59 MADV DK TRS M+ + + E RL +L G+ ++ + G PDFV + Sbjct: 1 MADVFDKETRSSIMKKVHSAGNKSTEMRLITLFQENGITGWRRNYKVKGHPDFVFLNKKI 60 Query: 60 VIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 IF GCFWH H C + P ++W +K +N++RD+ + + GW V+ +WEC L Sbjct: 61 AIFVDGCFWHGHDCRNTR-PKDNEDYWKKKRERNIKRDKEVTALFESRGWTVIRIWECEL 119 Query: 120 RGRE 123 + + Sbjct: 120 KKKN 123 >UniRef50_A4E909 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E909_9ACTN Length = 248 Score = 160 bits (404), Expect = 2e-38, Method: Composition-based stats. Identities = 46/136 (33%), Positives = 66/136 (48%), Gaps = 3/136 (2%) Query: 4 VHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLA-FRVQDASLPGRPDFVVDEYRCVIF 62 V +A K+M+ +T E + L GL +R++ +PG+PD + IF Sbjct: 110 VRRRAAIKKSMKGNKRANTKPELLVRQRLRAAGLTGYRLEWK-VPGKPDIAFPGRKIAIF 168 Query: 63 THGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL-RG 121 +GCFWH P EFW K +NVERDR I+ L ++GW + VWEC L + Sbjct: 169 VNGCFWHRCPKCNPSQPKRNVEFWEAKFRRNVERDRAAINALTQMGWTPITVWECELKKD 228 Query: 122 REKLTDEALTERLEEW 137 R T E + ER+ Sbjct: 229 RIDATMEKVIERVRAA 244 >UniRef50_A0RY33 DNA G/T mismatch repair endonuclease n=1 Tax=Cenarchaeum symbiosum RepID=A0RY33_CENSY Length = 157 Score = 158 bits (400), Expect = 6e-38, Method: Composition-based stats. Identities = 42/136 (30%), Positives = 61/136 (44%), Gaps = 3/136 (2%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M DV RS M I ++ T I+ ++ +LT G+ F + +PG PDF Sbjct: 1 MTDVFTPEKRSWVMSRIRSKGTGIDIKMKEILTHTGIKFEM-YPQIPGNPDFASRRLGIT 59 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 +F G FWH + K+P +FW KI N+ERD L+ GW VL WE + Sbjct: 60 VFCDGDFWHGYDYRRGKIPK--KQFWRNKIECNMERDLYVSGMLRSNGWSVLRFWEHDID 117 Query: 121 GREKLTDEALTERLEE 136 G + ++ E Sbjct: 118 GNPDKCSGKIQRKIRE 133 >UniRef50_C7XVZ3 Short-patch-repair endonuclease n=1 Tax=Lactobacillus coleohominis 101-4-CHN RepID=C7XVZ3_9LACO Length = 142 Score = 157 bits (398), Expect = 1e-37, Method: Composition-based stats. Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 4/133 (3%) Query: 6 DKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHG 65 RSK M I + E L + +G+ + LPG+PD + +Y+ +F G Sbjct: 3 TTEYRSKMMSKIRSTGGKAETILGKAIWHKGIRYFRNYKKLPGKPDLAITKYKIAVFVDG 62 Query: 66 CFWHHHHC---YLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWE-CALRG 121 +WH ++ K ++WL+KI N+E DR+ L+++GW V+ WE + Sbjct: 63 EYWHGYNYDEIKSGKRVHRNRQYWLKKINYNMEHDRKVNDELKKMGWTVIRFWERHQVFK 122 Query: 122 REKLTDEALTERL 134 + + + Sbjct: 123 DLNYCTDTILNAI 135 >UniRef50_D1WVX3 DNA mismatch endonuclease Vsr n=1 Tax=Streptomyces sp. ACT-1 RepID=D1WVX3_9ACTO Length = 272 Score = 157 bits (397), Expect = 1e-37, Method: Composition-based stats. Identities = 47/147 (31%), Positives = 59/147 (40%), Gaps = 7/147 (4%) Query: 6 DKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLP---GRPDFVVDEYRCVIF 62 MRA +DT E L LL GL +RV +P R D V R +F Sbjct: 126 SSDAVRAVMRANRRKDTGPELALRRLLHASGLRYRVDARPVPEVRRRADLVFPGARVAVF 185 Query: 63 THGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGR 122 GCFWH + + EFW EKI N RDR L+ GW V+ VWE Sbjct: 186 VDGCFWHGCPEHY-RPATRNAEFWREKIEGNRNRDRETNETLRAAGWSVVRVWEHE---A 241 Query: 123 EKLTDEALTERLEEWICGEGASAQIDT 149 + E ++ + G G SA T Sbjct: 242 PETAAELVSREVRAQRLGTGPSASFAT 268 >UniRef50_D1A867 DNA mismatch endonuclease Vsr n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1A867_THECD Length = 167 Score = 157 bits (397), Expect = 1e-37, Method: Composition-based stats. Identities = 43/115 (37%), Positives = 56/115 (48%), Gaps = 6/115 (5%) Query: 8 ATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDA-SLPG----RPDFVVDEYRCVIF 62 RS+NMRA +T E L S L G +R LPG RPD V + IF Sbjct: 25 EGRSRNMRANRRSNTKPEVALRSALHALGYRYRKDYRLDLPGGFRVRPDIVFTARKVAIF 84 Query: 63 THGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWEC 117 GCFWH + + P T +W K+ +NVERDR L+ GW+V+ +WE Sbjct: 85 VDGCFWHVCPEH-GRQPTTNEWYWAPKLRRNVERDRLANRALEAAGWKVVRLWEH 138 >UniRef50_C8VVT5 DNA mismatch endonuclease Vsr n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VVT5_DESAS Length = 150 Score = 156 bits (395), Expect = 2e-37, Method: Composition-based stats. Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 6/133 (4%) Query: 6 DKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHG 65 D K M ++ ++DT E L L G GL +R+ +PG+PD V + R +F G Sbjct: 4 DPQITHKIMSSVKSKDTRPEIALRKALWGMGLRYRINYKQIPGKPDVVFTKARIAVFCDG 63 Query: 66 CFWHHHHCYLFKVPATR------TEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 +WH H+ + + + +EFW KI N+ RD + L +GW V+ VWE + Sbjct: 64 DYWHGHNWAIRGLKSLDEELSHYSEFWSNKIRGNINRDETVNNELTNMGWHVIRVWESDI 123 Query: 120 RGREKLTDEALTE 132 + + + Sbjct: 124 KADVMRCASDIKQ 136 >UniRef50_P50186 NaeI very short patch repair endonuclease n=2 Tax=Actinomycetales RepID=VSN1_NOCAE Length = 166 Score = 155 bits (391), Expect = 6e-37, Method: Composition-based stats. Identities = 44/141 (31%), Positives = 55/141 (39%), Gaps = 6/141 (4%) Query: 8 ATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPG-----RPDFVVDEYRCVIF 62 A RS+NM+A T E L S L G +R G +PD V + +F Sbjct: 26 AGRSRNMQANRRSGTKPEAALRSALFKLGYRYRKDFLLRLGDGVKVKPDIVFTARKVAVF 85 Query: 63 THGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGR 122 GCFWH + + P T +W K+ +NVERDR L GWRVL VWE Sbjct: 86 IDGCFWHVCPDH-GRQPTTNEWYWSPKLRRNVERDRTVNQSLTNAGWRVLRVWEHEELQD 144 Query: 123 EKLTDEALTERLEEWICGEGA 143 LE Sbjct: 145 AVAAVVDTLHHLEHGFDTSAE 165 >UniRef50_C0ABV7 DNA G:T-mismatch repair endonuclease n=2 Tax=Verrucomicrobia RepID=C0ABV7_9BACT Length = 142 Score = 154 bits (390), Expect = 8e-37, Method: Composition-based stats. Identities = 44/129 (34%), Positives = 60/129 (46%), Gaps = 7/129 (5%) Query: 1 MADVHDKATRSKNMRAIATRDTA-IEKRLASLLTGQGLAFRVQDASLPGRPDFVVDE--- 56 M+DV KA RS M I E RL ++ G+ + ++ G+PDFV + Sbjct: 1 MSDVFTKAKRSAVMARIRGSGNKDTELRLIAIFRENGITGWRRKQTVLGKPDFVFRKPHS 60 Query: 57 --YRCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIV 114 R +F GCFWH + P EFWL KI +N RD+ L+ GWRVL + Sbjct: 61 GMKRLAVFVDGCFWHGCPLH-GTQPKNNAEFWLAKIARNQTRDQLVTRTLRARGWRVLRI 119 Query: 115 WECALRGRE 123 WE L + Sbjct: 120 WEHELARKN 128 >UniRef50_A6E296 Very short patch repair protein (DNA mismatch endonuclease) n=1 Tax=Roseovarius sp. TM1035 RepID=A6E296_9RHOB Length = 115 Score = 154 bits (390), Expect = 8e-37, Method: Composition-based stats. Identities = 47/115 (40%), Positives = 59/115 (51%), Gaps = 1/115 (0%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M D RSK M + ++D+ E L L +G V LPG PD V R V Sbjct: 1 MTDTVTSEVRSKIMARVRSKDSKAEVTLRKALHARGFRCLVNRRGLPGTPDLVFPRRRAV 60 Query: 61 IFTHGCFWHHHH-CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIV 114 +F H CFW+ H C PAT FW EK +N+ERD R I+ L+ LGWRV +V Sbjct: 61 LFVHVCFWYRHDECRKATTPATNEAFWTEKFKRNIERDARKIAELEALGWRVEVV 115 >UniRef50_A1SJ03 T/G mismatch-specific endonuclease n=1 Tax=Nocardioides sp. JS614 RepID=A1SJ03_NOCSJ Length = 153 Score = 152 bits (384), Expect = 3e-36, Method: Composition-based stats. Identities = 42/139 (30%), Positives = 63/139 (45%), Gaps = 8/139 (5%) Query: 6 DKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHG 65 D A S+ M A+ +DT E L + +G +R+ +PGRPD VV + IF G Sbjct: 13 DPAVTSRIMSAVRAKDTKPELLLRRAVHARGGRYRLHAPDVPGRPDLVVRGKKIAIFVDG 72 Query: 66 CFWHHHHCYLFKVPA--------TRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWEC 117 WH + + TRT++W++KI +NV RD+ L GWRVL +W Sbjct: 73 DLWHGNPAEWRRRGKDDLAGLFPTRTQWWVDKIERNVRRDQDVDRELAARGWRVLRLWAS 132 Query: 118 ALRGREKLTDEALTERLEE 136 + + + L E Sbjct: 133 DIIADPDAAADRVIIALRE 151 >UniRef50_P36434 HpaII very short patch repair endonuclease n=1 Tax=Haemophilus parainfluenzae RepID=VSH2_HAEPA Length = 141 Score = 151 bits (383), Expect = 4e-36, Method: Composition-based stats. Identities = 38/136 (27%), Positives = 56/136 (41%), Gaps = 2/136 (1%) Query: 3 DVHDKATRSKNMRAI-ATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVI 61 D R K M+A + T E LA L GL +R D S+ G PD Y+ I Sbjct: 2 DKLTPEQRKKCMKASSKNKGTKPELLLAKYLWALGLRYRKNDRSIFGTPDLSFKRYKIAI 61 Query: 62 FTHGCFWHHHHCYLFKV-PATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 F G FWH + K + +FW+ KI N+ RD++ L GW + W + Sbjct: 62 FIDGEFWHGKDWDIRKYDIKSNKDFWISKIEHNMNRDKKVNDYLISNGWVIFRFWGKDVL 121 Query: 121 GREKLTDEALTERLEE 136 + + + + E Sbjct: 122 KNPEKFSLEIQKAIYE 137 >UniRef50_D0L6H5 DNA mismatch endonuclease Vsr n=1 Tax=Gordonia bronchialis DSM 43247 RepID=D0L6H5_GORB4 Length = 144 Score = 150 bits (380), Expect = 1e-35, Method: Composition-based stats. Identities = 44/118 (37%), Positives = 64/118 (54%), Gaps = 5/118 (4%) Query: 4 VHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDA-SLPGR---PDFVVDEYRC 59 V ATRS+NM A+ +T+ E+ + S+L +G +R + GR PD V + R Sbjct: 11 VAPSATRSRNMAAVRRSETSPERAIRSVLHCRGFRYRKDYPIRVDGRLIRPDIVFTKKRV 70 Query: 60 VIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWEC 117 +F GCFWH + ++PAT T+FW K+ +N ERD L+ GW V+ VWE Sbjct: 71 AVFVDGCFWHLCPLH-GQIPATNTDFWRRKLERNAERDLEQTRALEGSGWTVVRVWEH 127 >UniRef50_C6D8V0 DNA mismatch endonuclease Vsr n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8V0_PAESJ Length = 147 Score = 150 bits (380), Expect = 1e-35, Method: Composition-based stats. Identities = 39/135 (28%), Positives = 70/135 (51%), Gaps = 1/135 (0%) Query: 3 DVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIF 62 D++ +S M + +++T +E+ ++ L +G FR SL GRPD V +Y+ VIF Sbjct: 2 DINKTNLKSNFMGRVKSKNTKLEQSVSKALWRKGFRFRKNVLSLYGRPDIAVKKYKLVIF 61 Query: 63 THGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGR 122 CFWH + FK+P+ +++W+ KI +N ERD + W ++ +WE L+ Sbjct: 62 IDSCFWHGCERH-FKLPSKNSDYWMNKISRNRERDLEVTQYYVDNNWILIRIWEHDLKAN 120 Query: 123 EKLTDEALTERLEEW 137 ++ L ++ Sbjct: 121 FEIVIIKLCIKILRA 135 >UniRef50_UPI0001BCE75A DNA mismatch endonuclease Vsr n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCE75A Length = 123 Score = 150 bits (378), Expect = 2e-35, Method: Composition-based stats. Identities = 41/123 (33%), Positives = 56/123 (45%), Gaps = 2/123 (1%) Query: 14 MRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWH--HH 71 MR + +DT E L L +G+ +R +LPG PD V+ + IF G FWH H Sbjct: 1 MRRVRAKDTKPEIALRKGLWKRGVRYRKNVRALPGTPDIVLAGRKIAIFVDGDFWHARGH 60 Query: 72 HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALT 131 + A+ FW K+ +NVERDR L E+GW VL W + + Sbjct: 61 RENPGEEVASNQSFWRAKLARNVERDREVNDSLTEMGWLVLRFWTSDIEKDLAGVLAVID 120 Query: 132 ERL 134 E L Sbjct: 121 EYL 123 >UniRef50_C9N7G6 DNA mismatch endonuclease Vsr n=5 Tax=Actinomycetales RepID=C9N7G6_9ACTO Length = 170 Score = 149 bits (377), Expect = 2e-35, Method: Composition-based stats. Identities = 44/132 (33%), Positives = 63/132 (47%), Gaps = 7/132 (5%) Query: 6 DKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLP---GRPDFVVDEYRCVIF 62 A ++M +RDTA E L SL+ GL +RV LP D V + +F Sbjct: 29 SSAANRRSMLGNRSRDTAPELLLRSLVHAAGLRYRVAAKPLPKMRRTADMVFRPAKVAVF 88 Query: 63 THGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGR 122 GCFWH + F +P T +W +KIG+NV+RDR RL + GW VL WE Sbjct: 89 IDGCFWHGCPDH-FVMPKTNRPYWEDKIGRNVQRDRDTDQRLADEGWLVLRFWEH---LD 144 Query: 123 EKLTDEALTERL 134 + + + + + Sbjct: 145 PEACADTVIDAV 156 >UniRef50_Q2IF54 T/G mismatch-specific endonuclease n=1 Tax=Anaeromyxobacter dehalogenans 2CP-C RepID=Q2IF54_ANADE Length = 148 Score = 149 bits (376), Expect = 3e-35, Method: Composition-based stats. Identities = 47/136 (34%), Positives = 65/136 (47%), Gaps = 1/136 (0%) Query: 2 ADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVI 61 ++ SK + + RDT E + +L G G +R LPG PD V R + Sbjct: 10 PELVRDEATSKRLGRVRQRDTGPELIVRRMLHGLGGRYRRSSKKLPGSPDIVNWSRRWAV 69 Query: 62 FTHGCFWHHH-HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 F HGCFWH H C VP FWL K+ N RD R I+ L+ LG+R +++WEC + Sbjct: 70 FVHGCFWHWHNDCGRASVPKRNRAFWLAKLNANRRRDCRVIADLEALGFRTMVLWECEIE 129 Query: 121 GREKLTDEALTERLEE 136 R + L+ L Sbjct: 130 ERPLDVERKLSRFLAR 145 >UniRef50_A5CSG2 Putative patch repair endonuclease n=1 Tax=Clavibacter michiganensis subsp. michiganensis NCPPB 382 RepID=A5CSG2_CLAM3 Length = 154 Score = 148 bits (373), Expect = 7e-35, Method: Composition-based stats. Identities = 41/134 (30%), Positives = 59/134 (44%), Gaps = 4/134 (2%) Query: 6 DKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLP---GRPDFVVDEYRCVIF 62 T + MR+ RDTA E + +L +G+ +RV + R D R +F Sbjct: 5 SSDTSRRVMRSNMRRDTAPELAVRRILHAKGMRYRVDFRVVRETRSRADIAFTRQRIAVF 64 Query: 63 THGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGR 122 GCFWH +L +P ++W+ K+ +NVERD + L+ LGW VL WE Sbjct: 65 IDGCFWHSCPEHL-HLPKANADYWIPKLARNVERDAEVAAVLRGLGWTVLRFWEHVPAQD 123 Query: 123 EKLTDEALTERLEE 136 ER E Sbjct: 124 TADRIIVAVERARE 137 >UniRef50_Q20YF6 DNA mismatch endonuclease vsr n=1 Tax=Rhodopseudomonas palustris BisB18 RepID=Q20YF6_RHOPB Length = 105 Score = 147 bits (372), Expect = 9e-35, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 53/97 (54%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 M D A RS+ M A+ ++T E + L G FR+ ++LPG PD ++ YR Sbjct: 1 MTDNVSPAVRSRIMAAVNNKNTKPEIAVRRALHAAGYRFRLHRSNLPGHPDLILPGYRTE 60 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERD 97 IF HGC+WH H C ++P++ +F KI + + RD Sbjct: 61 IFVHGCYWHGHSCRRRRLPSSNVQFLEAKISRTIGRD 97 >UniRef50_D1S9Q4 DNA mismatch endonuclease Vsr n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1S9Q4_9ACTO Length = 165 Score = 147 bits (372), Expect = 1e-34, Method: Composition-based stats. Identities = 39/135 (28%), Positives = 52/135 (38%), Gaps = 3/135 (2%) Query: 6 DKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQD---ASLPGRPDFVVDEYRCVIF 62 M+ TRDT E + LL GL +RV SL R D V R +F Sbjct: 26 SSPGVRGRMQRQRTRDTQPELAIRRLLHAAGLRYRVDVAPTRSLRRRADIVFGPARVAVF 85 Query: 63 THGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGR 122 GCFWH + + T T++W K+ +N RD L GW V+ VWE Sbjct: 86 VDGCFWHGCPQHGSRKTKTNTDYWSGKVARNQARDTATDGLLTNDGWLVIRVWEHEDPRE 145 Query: 123 EKLTDEALTERLEEW 137 + + W Sbjct: 146 AAERIASSVHKRRRW 160 >UniRef50_A6BKR1 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BKR1_9FIRM Length = 153 Score = 147 bits (372), Expect = 1e-34, Method: Composition-based stats. Identities = 37/137 (27%), Positives = 55/137 (40%), Gaps = 1/137 (0%) Query: 6 DKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHG 65 SK M + + E LA L +G +++ D +LPG PD + Y IF G Sbjct: 9 TDEATSKRMSNVKLKKGTAEMLLAKELWHKGFRYQLNDKTLPGSPDIAIRRYNIAIFVDG 68 Query: 66 CFWHHHHCYLFKVP-ATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREK 124 FWH + K E+W+EKI +N+ RD R L GW + W + Sbjct: 69 EFWHGYDWDNKKPKLKRNREYWIEKIEENMARDTRVDKELLVKGWVPIHFWTKEVLKETA 128 Query: 125 LTDEALTERLEEWICGE 141 + + E E + Sbjct: 129 SCVQVVQEIAFEIKMQD 145 >UniRef50_UPI00016A6F51 putative very short patch repair protein n=2 Tax=pseudomallei group RepID=UPI00016A6F51 Length = 148 Score = 147 bits (371), Expect = 1e-34, Method: Composition-based stats. Identities = 43/134 (32%), Positives = 60/134 (44%), Gaps = 4/134 (2%) Query: 6 DKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGR---PDFVVDEYRCVIF 62 S+ M +D E+ L S L QG+ FR+ A++PG D R +F Sbjct: 4 SPNATSRRMARTVGKDNPRERALRSALHRQGIRFRIHYAAIPGTRRSIDIAFTRLRLAVF 63 Query: 63 THGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGR 122 GCFWH + +P TR E+W+EKI N RDR +RL GW V+ +WE Sbjct: 64 CDGCFWHGCPAH-ATIPKTRREWWVEKIMANKIRDRDTDARLINSGWTVMRIWEHVPLED 122 Query: 123 EKLTDEALTERLEE 136 ++L E Sbjct: 123 AVTMIRTTLQQLNE 136 >UniRef50_B5HK48 Putative uncharacterized protein n=3 Tax=Streptomyces RepID=B5HK48_STRPR Length = 152 Score = 147 bits (371), Expect = 1e-34, Method: Composition-based stats. Identities = 41/151 (27%), Positives = 57/151 (37%), Gaps = 9/151 (5%) Query: 4 VHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPG----RPDFVVDEYRC 59 V S M A RDT E + LL GL +R+Q +PG D R Sbjct: 7 VPSSTGVSARMSRQARRDTDPEMAVRRLLYAAGLRYRLQRR-VPGMARRTIDIAFPGLRI 65 Query: 60 VIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 +F GCFWH + P +W EK+ KN+ RD L++ GW VL WE Sbjct: 66 AVFMDGCFWHGCPQH-ATSPKANASWWREKLDKNIARDIETTKHLEDAGWVVLRFWEHET 124 Query: 120 RGREKLTDEALTERLEEWICGEGASAQIDTQ 150 + E ++ G + + Sbjct: 125 ---PAQVANRIAEEIDRARAGRRPHPRTLGR 152 >UniRef50_A1W7Y7 Putative very short patch repair protein n=3 Tax=Burkholderiales RepID=A1W7Y7_ACISJ Length = 152 Score = 146 bits (370), Expect = 2e-34, Method: Composition-based stats. Identities = 39/117 (33%), Positives = 49/117 (41%), Gaps = 4/117 (3%) Query: 5 HDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASL--PGR-PDFVVDEYRCVI 61 S+ M + + T E L L +GL +R+ L P R D R + Sbjct: 6 PSSPETSRRMAKVRQKGTDAEIALRRELYRRGLRYRIDYEVLKKPRRVADVAFPGLRIAV 65 Query: 62 FTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECA 118 F GCFWH + P EFW +KI N RD SRL E+GW VL WE Sbjct: 66 FVDGCFWHGCPEH-ATWPKQNAEFWRQKIETNRLRDADTNSRLLEVGWTVLRFWEHE 121 >UniRef50_B3Q989 DNA mismatch endonuclease Vsr n=4 Tax=Rhodopseudomonas palustris RepID=B3Q989_RHOPT Length = 138 Score = 146 bits (370), Expect = 2e-34, Method: Composition-based stats. Identities = 46/126 (36%), Positives = 58/126 (46%), Gaps = 1/126 (0%) Query: 4 VHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFT 63 RS MR + T E +A++L GL FR SLPG PDF + IF Sbjct: 8 KPTDPARSALMRRVRQTGTKAEDEVAAILRQSGLRFRRNVKSLPGSPDFANKTNQWAIFV 67 Query: 64 HGCFWHHH-HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGR 122 HGCFWH H C P +FWL K NV RD L+ +G++VL +WEC R Sbjct: 68 HGCFWHRHEGCPRTTTPTRNRDFWLAKFAANVNRDTIKARLLRAMGFKVLTIWECETRNP 127 Query: 123 EKLTDE 128 + Sbjct: 128 SNVRRR 133 >UniRef50_A1UB42 DNA mismatch endonuclease vsr n=4 Tax=Actinomycetales RepID=A1UB42_MYCSK Length = 133 Score = 146 bits (369), Expect = 2e-34, Method: Composition-based stats. Identities = 41/125 (32%), Positives = 55/125 (44%), Gaps = 4/125 (3%) Query: 11 SKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGR---PDFVVDEYRCVIFTHGCF 67 S+ M A +++T IE RL S L +GL +R+ LP D V + ++ GCF Sbjct: 2 SRRMSAQLSQNTGIEMRLRSALHARGLRYRLHQRPLPQHRRTADIVFRRAKVAVYVDGCF 61 Query: 68 WHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTD 127 WH + P EFW KI NV RDR + L E GW + VWE Sbjct: 62 WHGCPEH-ATWPKRNAEFWRNKIEANVRRDRETDTSLIEAGWTPVRVWEHEDVDATADRI 120 Query: 128 EALTE 132 L + Sbjct: 121 GILVK 125 >UniRef50_UPI0001B50D9E putative DNA mismatch endonuclease n=1 Tax=Streptomyces viridochromogenes DSM 40736 RepID=UPI0001B50D9E Length = 154 Score = 146 bits (368), Expect = 3e-34, Method: Composition-based stats. Identities = 45/128 (35%), Positives = 58/128 (45%), Gaps = 5/128 (3%) Query: 10 RSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDA-SLPG---RPDFVVDEYRCVIFTHG 65 RS+NM AI RDT E+ + SLL G +RV L G RPD R +F G Sbjct: 17 RSRNMAAIKRRDTKPERTIRSLLHAAGKRYRVDYRLQLEGARPRPDIAFTRARVAVFVDG 76 Query: 66 CFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKL 125 CFWH + + P +W K+ +NV RDR L GW V+ VWE R Sbjct: 77 CFWHCCPEH-GRQPGVNGGYWGPKLERNVARDRAADEALAAAGWSVVRVWEHEDPDRAAA 135 Query: 126 TDEALTER 133 A+ + Sbjct: 136 RIIAVLDA 143 >UniRef50_D0LCF9 DNA mismatch endonuclease Vsr n=1 Tax=Gordonia bronchialis DSM 43247 RepID=D0LCF9_GORB4 Length = 161 Score = 146 bits (368), Expect = 3e-34, Method: Composition-based stats. Identities = 42/134 (31%), Positives = 54/134 (40%), Gaps = 4/134 (2%) Query: 6 DKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDA---SLPGRPDFVVDEYRCVIF 62 T M +DTA E ++ +L +G FR L R D R +F Sbjct: 17 SSETVRSRMSRQRNKDTAPEVQVRKILHARGARFRTDVKLESDLRTRADLAWRGLRLAVF 76 Query: 63 THGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGR 122 GCFWH + PA+ E+W EK+ NV RDRR + L + GW V WE R Sbjct: 77 IDGCFWHGCPEH-ATRPASNAEWWAEKLDANVARDRRTDALLADRGWTVRRYWEHEDPER 135 Query: 123 EKLTDEALTERLEE 136 A RL Sbjct: 136 VADDILATLRRLRR 149 >UniRef50_UPI0001B4F16E very short patch repair protein n=1 Tax=Streptomyces griseoflavus Tu4000 RepID=UPI0001B4F16E Length = 150 Score = 143 bits (362), Expect = 1e-33, Method: Composition-based stats. Identities = 44/125 (35%), Positives = 58/125 (46%), Gaps = 7/125 (5%) Query: 14 MRAIATRDTAIEKRLASLLTGQGLAFRVQDASLP---GRPDFVVDEYRCVIFTHGCFWHH 70 M RDTA E L SL+ GL +RV LP D V + +F GCFWH Sbjct: 1 MLGNRNRDTAPELLLRSLVHAAGLRYRVAAKPLPKMRRTADMVFRPVKVAVFIDGCFWHG 60 Query: 71 HHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEAL 130 + F +P T +W +KIG+NV+RDR RL E GW VL WE + + Sbjct: 61 CPEH-FVMPKTNRPYWEDKIGRNVQRDRDTDDRLSEAGWLVLRFWEH---LDPEACARTV 116 Query: 131 TERLE 135 + + Sbjct: 117 VDAVT 121 >UniRef50_D0LEE5 DNA mismatch endonuclease Vsr n=2 Tax=Actinomycetales RepID=D0LEE5_GORB4 Length = 155 Score = 141 bits (355), Expect = 8e-33, Method: Composition-based stats. Identities = 41/117 (35%), Positives = 50/117 (42%), Gaps = 5/117 (4%) Query: 6 DKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLP----GRPDFVVDEYRCVI 61 +MR RDT E + LL GL +RV A LP R D V R + Sbjct: 10 SSPAARASMRGNRRRDTRPELEVRRLLHAMGLRYRVDLAPLPESRRNRADIVFIRARVAV 69 Query: 62 FTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECA 118 F GC+WH + + FW KI N ERDRR + L+ GW VL WE Sbjct: 70 FIDGCYWHKCPDHY-RPARRNANFWSAKIEGNRERDRRVTAMLEGAGWTVLRFWEHE 125 >UniRef50_A4X2E7 DNA mismatch endonuclease vsr n=2 Tax=Actinomycetales RepID=A4X2E7_SALTO Length = 177 Score = 140 bits (353), Expect = 1e-32, Method: Composition-based stats. Identities = 41/138 (29%), Positives = 56/138 (40%), Gaps = 9/138 (6%) Query: 8 ATRSKN-------MRAIATRDTAIEKRLASLLTGQGLAFRVQDASL-PGRPDFVVDEYRC 59 RS +R TRDTA E L + GL +R+ RPD R Sbjct: 16 EARSWVATTEGSHLRGRRTRDTAPEVALRRAVHALGLRYRLGRTLFNRCRPDLAFPGPRV 75 Query: 60 VIFTHGCFWHHHHCY-LFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECA 118 +F GCFWH + + + W KI N +RD+R L E GWRV+ VWEC Sbjct: 76 AVFVDGCFWHGCPQHGPSRFRGPNADRWAAKIETNRQRDQRVDKELVEAGWRVVRVWECE 135 Query: 119 LRGREKLTDEALTERLEE 136 +R + + + Sbjct: 136 VRQEVGGAARRVAGVVRD 153 >UniRef50_A1T424 DNA mismatch endonuclease vsr n=12 Tax=Actinomycetales RepID=A1T424_MYCVP Length = 164 Score = 140 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 37/134 (27%), Positives = 54/134 (40%), Gaps = 6/134 (4%) Query: 6 DKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPG---RPDFVVDEYRCVIF 62 M+ TRDT E L LL +GL +RV LP R D V + +F Sbjct: 25 SDPKVRARMQRQRTRDTEPELALRRLLHARGLRYRVDAQPLPSLRRRADLVFGPAKIAVF 84 Query: 63 THGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGR 122 GCFWH + ++ +W +K+ +N RD + L E GW + VWE Sbjct: 85 VDGCFWHGCPKHGQRITHANPTYWTDKVARNNRRDVETDAALNEAGWLSIRVWEH---DD 141 Query: 123 EKLTDEALTERLEE 136 + E + + Sbjct: 142 PETVAEMVEAEVRR 155 >UniRef50_D1SGS2 DNA mismatch endonuclease Vsr n=2 Tax=Actinomycetales RepID=D1SGS2_9ACTO Length = 145 Score = 139 bits (351), Expect = 2e-32, Method: Composition-based stats. Identities = 34/123 (27%), Positives = 49/123 (39%), Gaps = 6/123 (4%) Query: 1 MADVH--DKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASL---PGRPDFVVD 55 M+D K+M+A RDT E L + GL + V + D + Sbjct: 1 MSDRSWASSIGVRKSMQANTGRDTKPELALRRAVHALGLRYYVNRRPIKAVRRTADLLFP 60 Query: 56 EYRCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVW 115 + +F GCFWH + + T FW +K+ N RD RL GW V+ +W Sbjct: 61 RLKLAVFLDGCFWHGCPEH-HTIAKTNAAFWSQKVATNRRRDVDTNERLTAAGWTVIRIW 119 Query: 116 ECA 118 E Sbjct: 120 EHE 122 >UniRef50_D2EGA7 DNA mismatch endonuclease Vsr n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EGA7_9EURY Length = 123 Score = 138 bits (348), Expect = 6e-32, Method: Composition-based stats. Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 4/124 (3%) Query: 14 MRAIATRDTAIEKRLASLLTGQGLA-FRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHH 72 M I + DT E +L + G+ +R+ SL G+PD V + + IF G FWH ++ Sbjct: 1 MARIKSIDTTPEIKLRKAIWKLGIRGYRIHLNSLIGKPDLVFTKKKVAIFVDGDFWHGYN 60 Query: 73 CY-LFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALT 131 +P +W +KI +N+ER ++L++ GW+V+ +WE ++ + + Sbjct: 61 WKNKGIIPK--RGYWQKKITRNIERREVVKAQLKQKGWKVVELWEHDIKKDAMSQAKKIK 118 Query: 132 ERLE 135 + Sbjct: 119 CIIN 122 >UniRef50_A3TJK1 Putative DNA mismatch endonuclease n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TJK1_9MICO Length = 140 Score = 137 bits (345), Expect = 1e-31, Method: Composition-based stats. Identities = 44/137 (32%), Positives = 56/137 (40%), Gaps = 9/137 (6%) Query: 4 VHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPG----RPDFVVDEYRC 59 V A S + A T E L L GL FRVQ +PG R D + Sbjct: 6 VPPSARLSARFSSQARDATKPELSLRRELHRHGLRFRVQY-LIPGLPRRRADLAFTRQKV 64 Query: 60 VIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 +F GCFWH + VP E+WL K N RD +L ELGW V+ +WE Sbjct: 65 AVFVDGCFWHACPLH-CVVPKANREWWLWKFSTNSSRDADTNIKLAELGWTVVRIWEHE- 122 Query: 120 RGREKLTDEALTERLEE 136 + +TE L + Sbjct: 123 --PLEHAVCKVTEALRD 137 >UniRef50_A6WGD4 DNA mismatch endonuclease vsr n=3 Tax=Actinomycetales RepID=A6WGD4_KINRD Length = 152 Score = 124 bits (313), Expect = 7e-28, Method: Composition-based stats. Identities = 35/111 (31%), Positives = 46/111 (41%), Gaps = 7/111 (6%) Query: 13 NMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPG-----RPDFVVDEYRCVIFTHGCF 67 MR +DT E L L +GL + V PG R D V R +F GCF Sbjct: 21 IMRRTGRKDTRPELALRRELHRRGLRYLVDATP-PGTNRRRRADLVFRGARVAVFVDGCF 79 Query: 68 WHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECA 118 WH ++ + P +W K+ RDR + L GW V+ VWE Sbjct: 80 WHSCPVHVHR-PKANAGWWRVKLASITARDRDTDAVLAAAGWCVVRVWEHE 129 >UniRef50_A4SC96 DNA mismatch endonuclease n=1 Tax=Chlorobium phaeovibrioides DSM 265 RepID=A4SC96_PROVI Length = 102 Score = 123 bits (309), Expect = 2e-27, Method: Composition-based stats. Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 6/106 (5%) Query: 37 LAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHHC-YLFKVPATRTEFWLEKIGKNVE 95 + +R+ L GRPD V + IF +GCFWH H+C ++P + T +WL+K+ +N Sbjct: 1 MGYRLHRKDLLGRPDIVWIGKKAAIFVNGCFWHWHNCGKGRRIPDSNTGYWLDKLKQNRL 60 Query: 96 RDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLEEWICGE 141 D ++I L LGW+V I+WEC L + + E++ + + G+ Sbjct: 61 CDAQNIKALTGLGWKVAIIWECELANKS-----YIEEKIRKLLMGD 101 >UniRef50_D1PRX0 Short patch repair protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRX0_9FIRM Length = 115 Score = 116 bits (290), Expect = 3e-25, Method: Composition-based stats. Identities = 29/78 (37%), Positives = 44/78 (56%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCV 60 MAD H K RS NM I + ++ E+ + L +G +R +LPG PD V+ +Y+ V Sbjct: 35 MADNHTKEIRSINMSHIRSTNSKPEEIVRKYLFSKGFRYRKNVRTLPGCPDIVLPKYKTV 94 Query: 61 IFTHGCFWHHHHCYLFKV 78 IF +GCFWH + ++ Sbjct: 95 IFVNGCFWHAYAAPKVQL 112 >UniRef50_A2STE7 Superfamily I DNA and RNA helicase and helicase subunits-like protein n=1 Tax=Methanocorpusculum labreanum Z RepID=A2STE7_METLZ Length = 1572 Score = 94.9 bits (235), Expect = 7e-19, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 47/155 (30%), Gaps = 31/155 (20%) Query: 8 ATRSKNMRA--IATRDTA---IEKRLASLLTGQGLAFRVQDASLPGRPDFVV--DE---- 56 RS M I D E +A +L G + R D V + Sbjct: 1232 EDRSSMMSGSDIRGVDDTEYFPE-SVAVMLEDYGYTVSRNVGCVGFRIDIAVSDPKDPGV 1290 Query: 57 YRCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWE 116 Y I G + +W + + +RDR L+ LGW ++ +W Sbjct: 1291 YMAGILCDG-----------------SNYWSSDVAR--DRDRLRSQVLEGLGWHLIRIWS 1331 Query: 117 CALRGREKLTDEALTERLEEWICGEGASAQIDTQG 151 + L + L + +A+I + Sbjct: 1332 AEWFQHPVSCTKILLDFLADIQKPIEPAAEIVEEP 1366 >UniRef50_D2SC98 DNA mismatch endonuclease vsr n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2SC98_9ACTO Length = 143 Score = 90.3 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 31/107 (28%), Positives = 40/107 (37%), Gaps = 19/107 (17%) Query: 21 DTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHHC------- 73 DTA E + L +G+ +RV G R I H Sbjct: 27 DTAHELAVRRRLHARGVRYRVDVRPCAGT------RARGDIRKD----HRAPHRSQARGG 76 Query: 74 --YLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECA 118 + VP E+WL ++ NV RDRR + L GWRVL WE Sbjct: 77 TLHGGHVPHANREWWLAELAGNVARDRRADAVLGAEGWRVLRFWEHE 123 >UniRef50_Q2KAA9 Hypothetical conserved protein n=4 Tax=Alphaproteobacteria RepID=Q2KAA9_RHIEC Length = 204 Score = 84.5 bits (208), Expect = 9e-16, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 41/141 (29%), Gaps = 23/141 (16%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTG---QGLAFRVQDASLPGRPDFVVDEY 57 M R N R + T E +L + L GL+FR Q DF Sbjct: 83 MPHAPVPPQRRANARRMRKALTEAELKLWNELRAHRLMGLSFRRQMPIAGYIVDFACPSR 142 Query: 58 RCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWEC 117 R ++ G H + NV D RLQ GW VL W Sbjct: 143 RLIVEIDGS---QHA-----------------LAPNVPYDPIRTQRLQADGWTVLRFWND 182 Query: 118 ALRGREKLTDEALTERLEEWI 138 + + + + + Sbjct: 183 DILRDIDNVCSHIIRIIGKDL 203 >UniRef50_Q11JR2 Putative uncharacterized protein n=5 Tax=Alphaproteobacteria RepID=Q11JR2_MESSB Length = 137 Score = 79.5 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 40/137 (29%), Gaps = 24/137 (17%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQ---GLAFRVQDASLPGRPDFVVDEY 57 M +N +A+ T E +L + L GL FR Q DF Sbjct: 1 MPHTPVPGRNRRNAKAMRNAMTDAELKLWNSLRAHRLAGLGFRRQMPIAGYIADFACPAE 60 Query: 58 RCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWEC 117 ++ G P T RD +RL+ GW +L W Sbjct: 61 ELIVEVDG--------SQHGEPNTAR------------RDELRTARLKADGWTILRFWND 100 Query: 118 A-LRGREKLTDEALTER 133 LR + + + Sbjct: 101 EILRDIDGVCRHIVAAA 117 >UniRef50_Q0ASA3 Putative uncharacterized protein n=2 Tax=Alphaproteobacteria RepID=Q0ASA3_MARMM Length = 225 Score = 75.3 bits (184), Expect = 6e-13, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 40/127 (31%), Gaps = 23/127 (18%) Query: 12 KNMRAIATRDTAIEKRLASLLTGQ---GLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFW 68 K R++ R T E L S L + G FR Q P DF E + ++ G Sbjct: 45 KRARSLRKRMTDAELILWSRLRARQLEGFKFRRQHPVAPYIADFACVELKLIVELDGDT- 103 Query: 69 HHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDE 128 H L DRR L+ GW V+ + + Sbjct: 104 HGTPQELAH-------------------DRRRTGFLEAAGWTVIRAFNIDVYQNLDGVLT 144 Query: 129 ALTERLE 135 +++ L Sbjct: 145 QISDALH 151 >UniRef50_A7KV39 Mobile intron protein n=1 Tax=Bacillus phage 0305phi8-36 RepID=A7KV39_9CAUD Length = 266 Score = 69.5 bits (169), Expect = 3e-11, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 41/107 (38%), Gaps = 20/107 (18%) Query: 22 TAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHHCYLFKVPAT 81 T E+R+ +L + + DF + + I +G +WH Sbjct: 167 TTPERRVKEILDELDIVYFTHHVVEGWNVDFYL-GKKLAIEVNGVYWHSK---------- 215 Query: 82 RTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDE 128 KNV +D+R +S L G+RVL + + L +K+ + Sbjct: 216 ---------QKNVNKDKRKLSELHSKGYRVLTIEDDELNDIDKVKQQ 253 >UniRef50_B3QHM0 Putative uncharacterized protein n=9 Tax=Bradyrhizobiaceae RepID=B3QHM0_RHOPT Length = 144 Score = 66.8 bits (162), Expect = 2e-10, Method: Composition-based stats. Identities = 27/154 (17%), Positives = 38/154 (24%), Gaps = 24/154 (15%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQ---GLAFRVQDASLPGRPDFVVDEY 57 M + + TA E L L G FR Q P DF Sbjct: 1 MVKRQISDFKRATANKLRGNSTAAEDILWRRLRRMNVEGSHFRRQVVIGPYIADFACLAK 60 Query: 58 RCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWEC 117 R +I G H ++RD LQ G+RV+ W Sbjct: 61 RLIIEVDGS---QHGDEDG-----------------LKRDEVRTQWLQSEGYRVIRFWNN 100 Query: 118 ALRGREKLTDEALTERLEEWICGEGASAQIDTQG 151 + + +A+ A Sbjct: 101 DVMSKTDAVMDAIYNA-TAVTPPRSPLASDPPPP 133 >UniRef50_A6UBV3 Putative uncharacterized protein n=6 Tax=Rhizobiaceae RepID=A6UBV3_SINMW Length = 146 Score = 60.6 bits (146), Expect = 1e-08, Method: Composition-based stats. Identities = 31/147 (21%), Positives = 46/147 (31%), Gaps = 26/147 (17%) Query: 8 ATRSKNMRAIATRDTAIEKRLASLLTGQ---GLAFRVQDASLPGRPDFVVDEYRCVIFTH 64 ++K R + D E L S L G+ G F Q P DF + R V+ Sbjct: 6 ERQTKRARRLRQADNDAEALLWSELRGRHLNGFKFVRQLPLGPYFADFGCRDERLVVEVD 65 Query: 65 GCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREK 124 G H N D R + GW V+ W + Sbjct: 66 GS---QH--------------------ANRSSDIRRDENMVATGWSVVRFWNMQIFNDRP 102 Query: 125 LTDEALTERLEEWICGEGASAQIDTQG 151 E + LE+ + GE +A + + Sbjct: 103 SVLETIVAFLEKRLLGEVRTADLTSIP 129 >UniRef50_Q1PVK2 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PVK2_9BACT Length = 78 Score = 60.3 bits (145), Expect = 2e-08, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 17/37 (45%) Query: 12 KNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPG 48 NM I ++ T E + L G +++ D LPG Sbjct: 20 YNMSKIRSKGTKPELIVRKFLFRNGFRYKLHDKMLPG 56 >UniRef50_Q2J2F2 Putative uncharacterized protein n=4 Tax=Rhodopseudomonas palustris RepID=Q2J2F2_RHOP2 Length = 138 Score = 59.9 bits (144), Expect = 3e-08, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 38/133 (28%), Gaps = 26/133 (19%) Query: 8 ATRSKNMRAIATRDTAIEKRLASLLTGQGL---AFRVQDASLPGRPDFVVDEYRCVIFTH 64 R + R+ T E++L L G FR Q P DF R VI Sbjct: 13 DQRIQRARSFRRNPTDAERKLWQRLRRPGFAEAHFRRQATIGPYFADFACHALRLVIEID 72 Query: 65 GCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREK 124 G + + + D L+ G+RVL W + Sbjct: 73 G----------GQHAGSNS-------------DVVRTGYLEAAGYRVLRFWNNDVLNNID 109 Query: 125 LTDEALTERLEEW 137 + + + + Sbjct: 110 GVMQIIVDAVRAA 122 >UniRef50_Q8KBQ5 DNA methylase, putative n=5 Tax=Bacteria RepID=Q8KBQ5_CHLTE Length = 1122 Score = 59.5 bits (143), Expect = 3e-08, Method: Composition-based stats. Identities = 27/123 (21%), Positives = 42/123 (34%), Gaps = 23/123 (18%) Query: 15 RAIATRDTAIEKRLASLLTGQ---GLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHH 71 R + T E+ L LL + GL FR Q P DF E R + G H Sbjct: 718 RQLRKEQTDAEQLLWFLLRDRRLAGLKFRRQHPVEPYVVDFYCHEARLAVELDGG---QH 774 Query: 72 HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALT 131 + + RD + + L+ G R+L W + + +A+ Sbjct: 775 NEPDER-----------------ARDAKREAFLEGKGIRILRFWNNDVLQNTEGVLQAIY 817 Query: 132 ERL 134 + L Sbjct: 818 DAL 820 >UniRef50_C2BJM6 Superfamily protein I DNA/RNA helicase n=1 Tax=Corynebacterium pseudogenitalium ATCC 33035 RepID=C2BJM6_9CORY Length = 1730 Score = 59.1 bits (142), Expect = 5e-08, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 39/114 (34%), Gaps = 22/114 (19%) Query: 25 EKRLASLLTGQGLAFRVQDASLPGRPDFVVDEY--RCVIFTHGCFWHHHHCYLFKVPATR 82 E+R+ + + +G Q R D VV+ R + G +WH Sbjct: 1366 EQRVYNRIIEKGFKVIPQFEEFGYRIDLVVEGAQGRLAVECDGDYWHS------------ 1413 Query: 83 TEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLEE 136 +N +D+ L+ LGW + ++E + + L+E Sbjct: 1414 --------DRNALQDQHRQRELERLGWTFVRIFESDFYLDSDEQMQKVWVALDE 1459 >UniRef50_Q60BC7 DNA methyltransferase n=8 Tax=Bacteria RepID=Q60BC7_METCA Length = 1192 Score = 58.7 bits (141), Expect = 6e-08, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 41/133 (30%), Gaps = 25/133 (18%) Query: 7 KATRSKNMRAIATRDTAIEKRLASLLTGQGL---AFRVQDASLPGRPDFVVDEYRCVIFT 63 ++ RA+ T E + LL + L FR Q DF +E+ V+ Sbjct: 627 PEDLKRHARAMRKTATDAENLMWRLLRNRRLANAKFRRQHPIGEYIADFYCEEHGLVVEL 686 Query: 64 HGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGRE 123 G + + D R + LQ G VL W + G Sbjct: 687 DG------GQH----------------AEQKTYDERRTAFLQSQGLTVLRFWNHQVLGET 724 Query: 124 KLTDEALTERLEE 136 + + + E + Sbjct: 725 EAVLQVIWEHVAR 737 >UniRef50_B0T195 Putative uncharacterized protein n=2 Tax=Caulobacteraceae RepID=B0T195_CAUSK Length = 142 Score = 58.3 bits (140), Expect = 7e-08, Method: Composition-based stats. Identities = 28/145 (19%), Positives = 41/145 (28%), Gaps = 27/145 (18%) Query: 12 KNMRAIATRDTAIEKRLA---SLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFW 68 K RA+ + E RL L +G FR Q L DFV R V+ G Sbjct: 4 KRARAMRKAMSVQEVRLWVRLRALKAEGFHFRRQAPLLGYFADFVCLGRRLVVEVDGP-- 61 Query: 69 HHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDE 128 HHH D L+ G++ L W + Sbjct: 62 HHHELEQA------------------AHDAYRDQTLRRHGFQTLRFW----TQAVHEDID 99 Query: 129 ALTERLEEWICGEGASAQIDTQGIH 153 A+ + + + + H Sbjct: 100 AVMSVICHALNAASPTRPLRGHPPH 124 >UniRef50_Q7UM88 Putative uncharacterized protein n=1 Tax=Rhodopirellula baltica RepID=Q7UM88_RHOBA Length = 122 Score = 58.0 bits (139), Expect = 1e-07, Method: Composition-based stats. Identities = 29/145 (20%), Positives = 47/145 (32%), Gaps = 26/145 (17%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQ---GLAFRVQDASLPGRPDFVVDEY 57 M + ++N R + T T E + +LL + G FR Q P DF E Sbjct: 1 MP-IRQPPQLTQNTRELRTNQTKPESLVWTLLRNRRLNGHKFRRQFPIPPFIADFACVEK 59 Query: 58 RCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWEC 117 R ++ G + H + ++D +RL GW VL Sbjct: 60 RLIVELDGDY-H---------------------EQQEQQDMSRTARLNRDGWIVLRFCNA 97 Query: 118 ALRGREKLTDEALTERLEEWICGEG 142 + + A+ + E G Sbjct: 98 DVLENTEAVGVAILRAMGEEWRGGE 122 >UniRef50_Q0HQD0 Putative uncharacterized protein n=1 Tax=Shewanella sp. MR-7 RepID=Q0HQD0_SHESR Length = 1904 Score = 57.6 bits (138), Expect = 1e-07, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 35/125 (28%), Gaps = 25/125 (20%) Query: 18 ATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVD------EYRCVIFTHGCFWHHH 71 D+ E + LT +G Q D V Y I G Sbjct: 1673 KGPDSDFEIAVIEALTKEGFECEPQVGVAGFFIDIAVKDPGSPGRYLMGIECDG------ 1726 Query: 72 HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALT 131 + K + +RDR L+ LGW++ +W G + + Sbjct: 1727 -----------AAYHSAKSAR--DRDRLRQEVLERLGWKINRIWSTDWFGNPEEVLAPII 1773 Query: 132 ERLEE 136 L E Sbjct: 1774 RELHE 1778 >UniRef50_A0YCZ9 Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YCZ9_9GAMM Length = 1945 Score = 57.2 bits (137), Expect = 2e-07, Method: Composition-based stats. Identities = 29/136 (21%), Positives = 48/136 (35%), Gaps = 25/136 (18%) Query: 21 DTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDE------YRCVIFTHGCFWHHHHCY 74 D+ E+ +A L +G + Q R D V Y I G +H Sbjct: 1632 DSDFEQAVAWALRDKGWKVQTQIGVSKFRVDLGVTHPDHPGVYLAGIECDGATYHG---- 1687 Query: 75 LFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERL 134 P+ R +RDR L+ LGWR++ +W + + RL Sbjct: 1688 ---SPSAR------------DRDRIRHGILENLGWRLVRLWSTDYFQDPEEAIAKIDRRL 1732 Query: 135 EEWICGEGASAQIDTQ 150 E + + + A++ Q Sbjct: 1733 NEILEEDRSKAELKRQ 1748 >UniRef50_B0TQR5 Putative uncharacterized protein n=1 Tax=Shewanella halifaxensis HAW-EB4 RepID=B0TQR5_SHEHH Length = 1916 Score = 56.8 bits (136), Expect = 2e-07, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 38/139 (27%), Gaps = 25/139 (17%) Query: 18 ATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVD------EYRCVIFTHGCFWHHH 71 D+ E + L +G Q D V Y I G +H Sbjct: 1669 KQPDSDFEIAVMDALKSEGFTCIPQVGVAGYFIDLAVQDPGQPGRYLMGIECDGATYH-- 1726 Query: 72 HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALT 131 K + +RDR S L+ LGW + +W + + + Sbjct: 1727 ---------------SAKSAR--DRDRLRQSVLESLGWTINRIWSTDWFKNPQAQLKPII 1769 Query: 132 ERLEEWICGEGASAQIDTQ 150 E L + + + Sbjct: 1770 ELLHQLKTEVQEHYETEQP 1788 >UniRef50_Q2IRE8 Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris HaA2 RepID=Q2IRE8_RHOP2 Length = 117 Score = 56.8 bits (136), Expect = 2e-07, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 39/126 (30%), Gaps = 23/126 (18%) Query: 12 KNMRAIATRDTAIEKRLASLLT---GQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFW 68 R + R T E RL L +G FR Q DFV + VI G Sbjct: 4 ATARTLRKRLTPQEARLWVQLRQLKSRGYHFRRQAPIGRYIVDFVCFGAKIVIEADGG-- 61 Query: 69 HHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDE 128 H + D++ + L+ G+RVL W + + Sbjct: 62 -QHGMPDG-----------------IAADQQRDAFLRGEGFRVLRFWNSDIDRHFDGVMQ 103 Query: 129 ALTERL 134 + + L Sbjct: 104 TVLDAL 109 >UniRef50_Q74DE7 Putative uncharacterized protein n=1 Tax=Geobacter sulfurreducens RepID=Q74DE7_GEOSL Length = 175 Score = 56.4 bits (135), Expect = 2e-07, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 42/127 (33%), Gaps = 24/127 (18%) Query: 10 RSKNMRAIATRDTAIEKRLA-SLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFW 68 R+++M + T EKR+ L L FR Q P DF E + VI G Sbjct: 64 RARDM---RSNMTEPEKRMWYQCLKHLPLRFRRQRPVGPYIVDFYCAELKLVIEIDGA-- 118 Query: 69 HHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDE 128 H + D + L+ LG RV+ + + E Sbjct: 119 -SHATDEG-----------------IVYDAGRTAFLEGLGLRVIRFGNHEVMNNIEGVFE 160 Query: 129 ALTERLE 135 +L + + Sbjct: 161 SLQKEVR 167 >UniRef50_A9D2E6 Putative uncharacterized protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D2E6_9RHIZ Length = 113 Score = 56.0 bits (134), Expect = 4e-07, Method: Composition-based stats. Identities = 28/126 (22%), Positives = 38/126 (30%), Gaps = 24/126 (19%) Query: 13 NMRAIATRDTAIEKRLASLLTG----QGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFW 68 R + T EKRL S L G GL R Q P DF + + VI G Sbjct: 4 RARRLRRTMTEGEKRLWSELRGFKRLYGLHVRKQVPIGPFVADFAIHSAKLVIEVDG--- 60 Query: 69 HHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDE 128 + + D+R L+ G+RV+ L E Sbjct: 61 ---EHHFTRQGMAN--------------DKRRDEWLKNAGYRVVRFNTGELSDTFDGCIE 103 Query: 129 ALTERL 134 + L Sbjct: 104 QILREL 109 >UniRef50_A3UG08 Putative uncharacterized protein n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UG08_9RHOB Length = 109 Score = 55.6 bits (133), Expect = 5e-07, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 38/117 (32%), Gaps = 22/117 (18%) Query: 22 TAIEKRLASLLTGQ--GLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHHCYLFKVP 79 T E++L S+L + GL FR Q DF + +I G H+ + Sbjct: 2 TDAERKLWSMLRRRPDGLKFRRQHPIGRYVADFACPQIGLIIELDGG---QHNLPAHR-- 56 Query: 80 ATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLEE 136 RD L+ GW VL W + + + + + + Sbjct: 57 ---------------RRDEHRTRWLENQGWHVLRFWNTQVFEAPDMLGDQILDLVHA 98 >UniRef50_Q1LHY8 Putative uncharacterized protein n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LHY8_RALME Length = 58 Score = 55.6 bits (133), Expect = 5e-07, Method: Composition-based stats. Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Query: 67 FWHHHHCYLF-KVPATRTEFWLEKIGKNVERDRRDISRLQELG 108 FWH H C + P + W+ +I N E+D R IS L ELG Sbjct: 16 FWHGHSCKEGTREPKSNQACWVPRIAANHEQDCRQISELMELG 58 >UniRef50_Q469I5 Putative uncharacterized protein n=3 Tax=Methanosarcina RepID=Q469I5_METBF Length = 1888 Score = 55.6 bits (133), Expect = 5e-07, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 44/141 (31%), Gaps = 26/141 (18%) Query: 18 ATRDTAI-EKRLASLLTGQGLAFRVQDASLPGRPDFVVD------EYRCVIFTHGCFWHH 70 + + E+ + + L G Q R D V Y I G Sbjct: 1256 REKLDSPFEEAVYNFLAENGCEIHRQIGCAGYRLDLAVPDPAHPERYVLGIECDGE---- 1311 Query: 71 HHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEAL 130 ++ + + +RDR L+ LGW++ VW K + E L Sbjct: 1312 -------------SYYSLHVAR--DRDRLRQQVLEGLGWKIYRVWSTDWYLHPKESREKL 1356 Query: 131 TERLEEWICGEGASAQIDTQG 151 E + + I A+ + + Sbjct: 1357 LEAVRKSIKETKIQAKSEIEP 1377 >UniRef50_A4IT87 Putative uncharacterized protein n=4 Tax=Geobacillus RepID=A4IT87_GEOTN Length = 145 Score = 55.6 bits (133), Expect = 5e-07, Method: Composition-based stats. Identities = 21/117 (17%), Positives = 37/117 (31%), Gaps = 21/117 (17%) Query: 24 IEKRLASLLTGQGLAFRVQD--ASLPGRPDFVVDEYRCVIFTHGCFWHHHHCYLFKVPAT 81 IE++L LT G + Q R D + +Y+ I G +H Sbjct: 48 IERKLYEALTWSGYNVKAQYVVPPARYRIDLALPQYKIAIECDGRAYHSTPEQKRH---- 103 Query: 82 RTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLEEWI 138 D++ + L+ GW+VL + + + E + I Sbjct: 104 ---------------DQKKDAYLRRKGWKVLRFPGSVIHANVGDVIQQIEEEIRRTI 145 >UniRef50_Q1GS85 Putative uncharacterized protein n=1 Tax=Sphingopyxis alaskensis RepID=Q1GS85_SPHAL Length = 146 Score = 55.3 bits (132), Expect = 6e-07, Method: Composition-based stats. Identities = 28/132 (21%), Positives = 36/132 (27%), Gaps = 24/132 (18%) Query: 7 KATRSKNMRAIATRDTAIEKRLASLLTGQ--GLAFRVQDASLPGRPDFVVDEYRCVIFTH 64 A R + T EKR+ L L +R Q P DF + VI Sbjct: 8 PAGTVSRARTLRKHATGAEKRMWQALRETFPALKWRRQVPIGPYFADFFSFAAKLVIEVD 67 Query: 65 GCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREK 124 G H D R LQ G VL W + + Sbjct: 68 G----GQHAEAASY------------------DARRTEFLQAQGLTVLRFWNNDVLENTR 105 Query: 125 LTDEALTERLEE 136 E ++ L E Sbjct: 106 GVMETISLSLRE 117 >UniRef50_D0J3F2 Putative uncharacterized protein n=2 Tax=Comamonas testosteroni RepID=D0J3F2_COMTE Length = 1594 Score = 55.3 bits (132), Expect = 6e-07, Method: Composition-based stats. Identities = 29/131 (22%), Positives = 46/131 (35%), Gaps = 27/131 (20%) Query: 15 RAIATRD--TAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVD------EYRCVIFTHGC 66 I+ RD + +E+ + LT QGL + Q D V Y I G Sbjct: 1259 AGISGRDLESPLEEDVYEALTAQGLQVQTQIGIAGFFIDLAVVDPEQPGRYLLGIECDGM 1318 Query: 67 FWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLT 126 +H +R+ +RDR S L+ GW +L +W C + + Sbjct: 1319 SYH----------HSRSA---------RDRDRLRQSVLESQGWTLLRIWGCDWFRQPRAQ 1359 Query: 127 DEALTERLEEW 137 E + +E Sbjct: 1360 TERVLAAVEAA 1370 >UniRef50_B4WZL9 Putative uncharacterized protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4WZL9_9GAMM Length = 131 Score = 55.3 bits (132), Expect = 6e-07, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 38/128 (29%), Gaps = 26/128 (20%) Query: 10 RSKNMRAIATRDTAIEKRLASLLTG---QGLAFRVQDASLPGRPDFVVDEYRCVIFTHGC 66 R + + + T T E+ L L G FR Q P DFV R VI G Sbjct: 4 RHRFAKDLRTHMTDAERLLWQHLRAHRLNGQKFRRQQPIGPYIVDFVHLGARLVIEADG- 62 Query: 67 FWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLT 126 + D+ L+ G+RV+ W + Sbjct: 63 -----GQHNGD-----------------AADQERDDWLKAEGYRVMRFWNNDILQSTDAV 100 Query: 127 DEALTERL 134 E + + + Sbjct: 101 LEEIFKAV 108 >UniRef50_B3EIG9 Type I site-specific deoxyribonuclease, HsdR family n=4 Tax=Bacteria RepID=B3EIG9_CHLL2 Length = 1403 Score = 55.3 bits (132), Expect = 7e-07, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 35/106 (33%), Gaps = 23/106 (21%) Query: 12 KNMRAIATRDTAIEKRLASLLTGQ---GLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFW 68 + R + + T E + LL GL FR Q DF E++ V+ G Sbjct: 395 ERARELRQQQTPAEDIVWELLRDHRFEGLKFRRQHQIGNYIADFFCSEHKLVVEVDGDV- 453 Query: 69 HHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIV 114 H + K D + + L+ LG+ V+ Sbjct: 454 HRSPEVVAK-------------------DSQRDAYLRSLGYTVIRF 480 >UniRef50_P45736 Uncharacterized protein ycjD n=18 Tax=Enterobacteriaceae RepID=YCJD_ECOLI Length = 117 Score = 54.9 bits (131), Expect = 8e-07, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 39/139 (28%), Gaps = 30/139 (21%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQ---GLAFRVQDASLPGRPDFVVDEY 57 M D R + T E++L L + FR Q DF Sbjct: 1 MIDKIKSNARD-----LRRNLTLQERKLWRYLRSRRFSDFKFRRQHPVGSYILDFACCSA 55 Query: 58 RCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWEC 117 R V+ G H V D R S L+ GW VL W Sbjct: 56 RVVVELDGG---QHDLA-------------------VAYDSRRTSWLESQGWTVLRFWNN 93 Query: 118 ALRGREKLTDEALTERLEE 136 + E+ E + + L Sbjct: 94 EIDCNEETVLENILQELNR 112 >UniRef50_B8IN62 Putative uncharacterized protein n=4 Tax=Rhizobiales RepID=B8IN62_METNO Length = 206 Score = 54.9 bits (131), Expect = 8e-07, Method: Composition-based stats. Identities = 29/137 (21%), Positives = 42/137 (30%), Gaps = 31/137 (22%) Query: 8 ATRSKNMRAIATRDTAIEKRLASLL--------TGQGLAFRVQDASLPGRPDFVVDEYRC 59 +R++ R++ T E RL S L G F Q P DF E R Sbjct: 6 PSRTRRARSLRQSQTEAEARLWSRLCGSRQRDRRLGGFKFVRQCPVGPYVADFACREERL 65 Query: 60 VIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 +I G H + D+ +RL LG+RVL W + Sbjct: 66 IIGADGS---RH--------------------ADSAHDQTRDARLSALGYRVLRFWNGEI 102 Query: 120 RGREKLTDEALTERLEE 136 + + L Sbjct: 103 FANLPGVLDTILAALSS 119 >UniRef50_A0LY74 5-methyltetrahydrofolate:homocysteine methyltransferase-cobalamin binding domain n=2 Tax=Flavobacteriales RepID=A0LY74_GRAFK Length = 1046 Score = 54.9 bits (131), Expect = 8e-07, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 37/126 (29%), Gaps = 23/126 (18%) Query: 20 RDTAIEKRLASLLTGQ---GLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHHCYLF 76 + T E +L +G+ G FR Q DFV + + VI G H + Sbjct: 457 KSTKAETKLWEAFSGKKLEGFKFRRQHIIGSYIADFVCLKEKLVIEVDG-LIHQLPDHKL 515 Query: 77 KVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLEE 136 D + L+E G+RV+ + + L++ Sbjct: 516 S-------------------DEARTAWLKEQGFRVVRFTNSQVLEDLDSVLDKTLSALKK 556 Query: 137 WICGEG 142 Sbjct: 557 APPSGA 562 >UniRef50_C6M9A8 DNA (Cytosine-5-)-methyltransferase n=28 Tax=Proteobacteria RepID=C6M9A8_NEISI Length = 142 Score = 54.5 bits (130), Expect = 9e-07, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 38/138 (27%), Gaps = 28/138 (20%) Query: 2 ADVHDKATRSKNMRAIATRDTAIEKRLASLLTG---QGLAFRVQDASLPGRPDFVVDEYR 58 AD R+K M + E +L L G FR Q DF+ + Sbjct: 23 ADNPALRQRAKAM---RKEMSEAEAKLWQHLRAGRLNGHKFRRQQPMGNYIVDFMCITPK 79 Query: 59 CVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECA 118 ++ G H D + L LG+ VL W Sbjct: 80 LIVEADG----GQHAEQA------------------AYDHARTAYLNSLGFTVLRFWNHE 117 Query: 119 LRGREKLTDEALTERLEE 136 + + + L+E Sbjct: 118 ILQQTNDVLAEILRVLQE 135 >UniRef50_A9DBA2 Putative uncharacterized protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9DBA2_9RHIZ Length = 124 Score = 54.5 bits (130), Expect = 1e-06, Method: Composition-based stats. Identities = 23/143 (16%), Positives = 43/143 (30%), Gaps = 23/143 (16%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTG---QGLAFRVQDASLPGRPDFVVDEY 57 M + + R + T T E ++ +LL +G FR + P DF Sbjct: 1 MPHSNITPKTRERARKLRTELTRAEAKMWNLLRDFRPRGARFRRETPIGPYIADFAWLSK 60 Query: 58 RCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWEC 117 + VI G H + D + +++ G+ VL Sbjct: 61 KVVIEVDGD---SHETVAGR-----------------AHDNVRDAWMKDQGYTVLRFDNS 100 Query: 118 ALRGREKLTDEALTERLEEWICG 140 L E + + + ++ Sbjct: 101 DLIDAEDHVFLEIEKAISTYLDD 123 >UniRef50_D2MA63 Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris DX-1 RepID=D2MA63_RHOPA Length = 133 Score = 54.5 bits (130), Expect = 1e-06, Method: Composition-based stats. Identities = 23/130 (17%), Positives = 38/130 (29%), Gaps = 25/130 (19%) Query: 9 TRSKNMRAIATRDTAIEKRLASLLTGQ---GLAFRVQDASLPGRPDFVVDEYRCVIFTHG 65 TR+ R + + T E L L + G F+ Q DF E R V+ G Sbjct: 6 TRTPIARRLRAQPTQAETLLWRRLRNRQLDGWKFKRQFPIDRFVVDFCCTEARLVVELDG 65 Query: 66 CFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKL 125 + + E+D L +G+ V+ W + Sbjct: 66 ------GQHGQQT----------------EQDAARTEVLSAMGYLVIRFWNNDVLSNIDG 103 Query: 126 TDEALTERLE 135 E + + Sbjct: 104 VLETIARTIR 113 >UniRef50_Q8PQ75 Putative uncharacterized protein n=1 Tax=Xanthomonas axonopodis pv. citri RepID=Q8PQ75_XANAC Length = 109 Score = 54.5 bits (130), Expect = 1e-06, Method: Composition-based stats. Identities = 27/126 (21%), Positives = 38/126 (30%), Gaps = 31/126 (24%) Query: 22 TAIEKRLASLLTGQ---GLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHHCYLFKV 78 T E+ + L + GL FR Q P DF E R +I G H Sbjct: 2 TDAERAVWRCLRSKQLHGLKFRRQHPIPPYIADFCCIERRLIIELDGS---QHDASS--- 55 Query: 79 PATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLEEWI 138 D+ LQ GW VL W L+ +A+ E + + + Sbjct: 56 ------------------DQARSQWLQSQGWTVLRFW----NNDVLLSLDAVVETICKMV 93 Query: 139 CGEGAS 144 Sbjct: 94 ATPYPH 99 >UniRef50_D1C1E2 Putative uncharacterized protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C1E2_SPHTD Length = 138 Score = 54.5 bits (130), Expect = 1e-06, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 45/149 (30%), Gaps = 31/149 (20%) Query: 6 DKATRSKNMRAIATRDTAIEKRLASLLTGQ---GLAFRVQDASLPGRPDFVVDEYRCVIF 62 + R + T E L L G+ GL FR Q P DF R +I Sbjct: 13 TTQALNAAARQLRRTQTPAEATLWQALRGRSFHGLKFRRQHPLGPYVVDFYCPSLRLIIE 72 Query: 63 THGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGR 122 G H R ++ D L + + V+ R Sbjct: 73 VDGDVHH-----------ERRDY-----------DTARTEHLAQYHYHVVRF-----RNE 105 Query: 123 EKLT-DEALTERLEEWICGEGASAQIDTQ 150 E L + + +RL I + +A ++ Sbjct: 106 EVLCDLDGVLQRLTALITEDHPAATLEQP 134 >UniRef50_Q0ANZ5 Putative uncharacterized protein n=3 Tax=Alphaproteobacteria RepID=Q0ANZ5_MARMM Length = 123 Score = 54.5 bits (130), Expect = 1e-06, Method: Composition-based stats. Identities = 31/124 (25%), Positives = 40/124 (32%), Gaps = 25/124 (20%) Query: 15 RAIATRDTAIEKRLASLLTGQ---GLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHH 71 R + T T E RL S L + G FR Q P DFV E R +I G Sbjct: 10 RRMRTAQTPAEARLWSRLRNRKLTGAKFRRQIPIGPYIVDFVCFEARLIIEADG------ 63 Query: 72 HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALT 131 + P D + L+ G+ VL W + R E + Sbjct: 64 GQHADLEPE----------------DAERTAWLEAQGFTVLRFWNRHILKRTDAVMEVIG 107 Query: 132 ERLE 135 E L Sbjct: 108 ETLH 111 >UniRef50_Q1GVC8 Putative uncharacterized protein n=1 Tax=Sphingopyxis alaskensis RepID=Q1GVC8_SPHAL Length = 173 Score = 54.1 bits (129), Expect = 1e-06, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 46/154 (29%), Gaps = 31/154 (20%) Query: 3 DVHDKATRSKNMRAIATRDTAIEKRLASLL---TGQGLAFRVQDASLPGRPDFVVDEYRC 59 D+ + +R++ M T EKRL L G FR Q DFV Sbjct: 31 DIAELQSRARQM---RNNPTEPEKRLWRQLSNGQLYGHKFRRQQVIGWFIADFVCASANL 87 Query: 60 VIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 ++ G H DR L E G+R + V + Sbjct: 88 IVEVDGDT---HEETA---------------------DRARDKALAEQGYRTVRVSNHEV 123 Query: 120 RGREKLTDEALTERLEEWICGEGASAQIDTQGIH 153 ++E L + G + + +G+ Sbjct: 124 MTNMDGVLAFISEALRQA-DGPHPNPSPEGEGLK 156 >UniRef50_A3XGZ5 DNA methylase, putative n=1 Tax=Leeuwenhoekiella blandensis MED217 RepID=A3XGZ5_9FLAO Length = 350 Score = 54.1 bits (129), Expect = 1e-06, Method: Composition-based stats. Identities = 31/130 (23%), Positives = 46/130 (35%), Gaps = 26/130 (20%) Query: 9 TRS---KNMRAIATRDTAIEKRLASLLTGQ---GLAFRVQDASLPGRPDFVVDEYRCVIF 62 RS K R + T +EK L LL + GL FR Q DF E + +I Sbjct: 2 KRSNHIKLARLLRQDSTEVEKVLWELLRDRKINGLKFRRQHPLKSYIVDFFCYELKLIIE 61 Query: 63 THGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGR 122 G + H+H E+D L+ LG++VL + Sbjct: 62 LDGGY-HNHPEQK-------------------EKDEIRDLHLKALGYKVLRFSNTTVLKE 101 Query: 123 EKLTDEALTE 132 K+ + + E Sbjct: 102 PKVITDTIAE 111 >UniRef50_B8GSF1 Putative uncharacterized protein n=2 Tax=Gammaproteobacteria RepID=B8GSF1_THISH Length = 1575 Score = 53.7 bits (128), Expect = 2e-06, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 39/133 (29%), Gaps = 25/133 (18%) Query: 18 ATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVD------EYRCVIFTHGCFWHHH 71 D+ E + + G + Q S D V Y + G +H Sbjct: 1239 REPDSPFELEVMRAIERLGYEVQPQVGSKGFYIDLAVRDPAQPGRYILAVECDGASYH-- 1296 Query: 72 HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALT 131 I + ERDR S L+ LGW +W + + L Sbjct: 1297 ---------------SSAIAR--ERDRLRQSVLEGLGWSFHRIWSTEWFRNARGEIDRLR 1339 Query: 132 ERLEEWICGEGAS 144 E +E + AS Sbjct: 1340 ESIESALRSAEAS 1352 >UniRef50_A6E483 DNA helicase, putative n=1 Tax=Roseovarius sp. TM1035 RepID=A6E483_9RHOB Length = 1051 Score = 53.3 bits (127), Expect = 3e-06, Method: Composition-based stats. Identities = 26/131 (19%), Positives = 44/131 (33%), Gaps = 22/131 (16%) Query: 7 KATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVV---DEYRCVIFT 63 RSK + D+ E+++ L +GL Q R DF + + + + Sbjct: 939 TEPRSKIGEGV--FDSDWERKVYHALKARGLDPHPQHEVAGRRLDFALFGTNGVKLDLEV 996 Query: 64 HGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGRE 123 G WH K ++ W +L+ LGWRV W L Sbjct: 997 DGRKWHESPDGRRKT----SDLWR-------------DHQLKSLGWRVRRFWVDELSRDM 1039 Query: 124 KLTDEALTERL 134 + + + + L Sbjct: 1040 EKCLDRVEQDL 1050 >UniRef50_B3QF84 Putative uncharacterized protein n=2 Tax=Rhodopseudomonas palustris RepID=B3QF84_RHOPT Length = 134 Score = 52.9 bits (126), Expect = 3e-06, Method: Composition-based stats. Identities = 30/128 (23%), Positives = 44/128 (34%), Gaps = 23/128 (17%) Query: 11 SKNMRAIATRDTAIEKRLASLLTG---QGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCF 67 S R + R T E RL + L G +G FR + DFV R +I G Sbjct: 3 SATARGLRKRLTPQETRLWAGLRGLKPRGYHFRRKVPIGCYVVDFVCLSARLIIEADGD- 61 Query: 68 WHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTD 127 +PA T DR+ L+ G+RVL W+ + Sbjct: 62 -------QHAMPAYFTA------------DRQRGVVLRRQGFRVLHFWDSDIDRYFDGVM 102 Query: 128 EALTERLE 135 + + + L Sbjct: 103 QTVLDALA 110 >UniRef50_C8SSW9 Putative uncharacterized protein n=2 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SSW9_9RHIZ Length = 148 Score = 52.9 bits (126), Expect = 3e-06, Method: Composition-based stats. Identities = 25/154 (16%), Positives = 41/154 (26%), Gaps = 25/154 (16%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLA---SLLTGQGLAFRVQDASLPGRPDFVVDEY 57 M + RA+ T E L L G+ FR Q P DF Sbjct: 1 MPRTRVSFEMRQKARALRVHATKGESLLWYELRELKAAGIKFRRQCPIGPYIVDFACLGV 60 Query: 58 RCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWEC 117 + ++ G H K D + L+ LG+ V V E Sbjct: 61 KLIVEVDGD---MHEHEKGK-----------------RHDAVRDASLRSLGFDVFRVDEP 100 Query: 118 ALRGREKLTDEALTERLEEWICGEGASAQIDTQG 151 + + + ++E + + Sbjct: 101 DVINSAWHVAQVVKGKVESM--SGDPTRPLRGHP 132 >UniRef50_B8GV81 Putative uncharacterized protein n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GV81_THISH Length = 141 Score = 52.9 bits (126), Expect = 3e-06, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 43/126 (34%), Gaps = 25/126 (19%) Query: 12 KNMRAIATRDTAIEKRLASLLTGQ---GLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFW 68 KN R + + T E+ L L G+ G FR Q DF+ E R ++ G Sbjct: 28 KNARLLRKQSTDAEQLLWFHLRGRRLAGYKFRRQVVIETYIVDFLCVEGRLIVEADG--- 84 Query: 69 HHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDE 128 + + D R + L+ LG+RV+ W + + + Sbjct: 85 ---GQH----------------AEQRRYDARRSAELETLGYRVIRFWNHEILADIEPVLD 125 Query: 129 ALTERL 134 + L Sbjct: 126 EIFRAL 131 >UniRef50_C2AM99 Putative uncharacterized protein n=1 Tax=Tsukamurella paurometabola DSM 20162 RepID=C2AM99_TSUPA Length = 284 Score = 52.9 bits (126), Expect = 3e-06, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 36/130 (27%), Gaps = 22/130 (16%) Query: 8 ATRSKNMRAIATRDTAIEKRLASLLTGQGLAFR-VQDASLPGRPDFVVDEYRCVIFTHGC 66 A R+ A + E+R +LL G++ Q D R I G Sbjct: 175 AGRTLLASANGDTHSEAERRFRALLRAAGISGWHQQHRFERWWIDVAFPGRRIAIEIDGW 234 Query: 67 FWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIV-WECALRGREKL 125 +H H D +RL GW +L W+ + + Sbjct: 235 AYHRSHERFA-------------------NDAEKHTRLALAGWTLLRFTWQ-QITEQPAE 274 Query: 126 TDEALTERLE 135 L L Sbjct: 275 VVRTLARALN 284 >UniRef50_C3BCE6 Putative uncharacterized protein n=8 Tax=Bacillus cereus group RepID=C3BCE6_BACMY Length = 161 Score = 52.9 bits (126), Expect = 3e-06, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 45/132 (34%), Gaps = 27/132 (20%) Query: 22 TAIEKRLASLLTGQGLAFRVQDA--SLPGRPDFVV---DEYRCVIFTHGCFWHHHHCYLF 76 +EKR+ L +G VQ + + DF + + G F H Sbjct: 45 NKLEKRVYDALRSKGYCPTVQYKVSNTRFKLDFAFFSSTGSKIDLEIDGPF-HRTPE--- 100 Query: 77 KVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLEE 136 ++RDRR ++ GW+V+ + + L+ + L +L E Sbjct: 101 ----------------GIKRDRRRDKYMKANGWKVIRITDIILKDGFEKQILLLEAKLNE 144 Query: 137 WICGEGASAQID 148 G S + D Sbjct: 145 --LGIEPSKEAD 154 >UniRef50_Q3BYE9 Putative uncharacterized protein n=4 Tax=Xanthomonas RepID=Q3BYE9_XANC5 Length = 130 Score = 52.9 bits (126), Expect = 3e-06, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 35/132 (26%), Gaps = 27/132 (20%) Query: 7 KATRSKNMRAIATRDTAIEKRLASLLTGQ---GLAFRVQDASLPGRPDFVVDEYRCVIFT 63 + RA T E+ L G G FR Q P DF E + ++ Sbjct: 8 PTVTRAHARASRRHMTEAERALWRRPRGNQLQGFKFRRQHPIAPYIADFCCIEAKVIVEL 67 Query: 64 HGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGRE 123 G + D+ LQ GW VL W + Sbjct: 68 DG------SQHQASF------------------DQARTRWLQSKGWIVLRFWNNDVLLSL 103 Query: 124 KLTDEALTERLE 135 EA+ + Sbjct: 104 DAVVEAIFTIVA 115 >UniRef50_D0Y5E4 Putative uncharacterized protein n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0Y5E4_9CAUL Length = 147 Score = 52.6 bits (125), Expect = 4e-06, Method: Composition-based stats. Identities = 23/132 (17%), Positives = 32/132 (24%), Gaps = 23/132 (17%) Query: 7 KATRSKNMRAIATRDTAIEKRLASLLTGQGL---AFRVQDASLPGRPDFVVDEYRCVIFT 63 N R + + E L L GL FR Q P DF R + Sbjct: 4 PKATVANARRLRKEMSKPEMNLWHALRRGGLDGHKFRRQHPIGPYVLDFYCAALRLAVEV 63 Query: 64 HGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGRE 123 + + P RD L G R L + + Sbjct: 64 DS-----YAHCVGSRP---------------GRDLARDRWLLAQGVRTLRIPAHEVMASV 103 Query: 124 KLTDEALTERLE 135 T + E + Sbjct: 104 DDTLSTIREYIT 115 >UniRef50_Q9RXT5 Putative uncharacterized protein n=1 Tax=Deinococcus radiodurans RepID=Q9RXT5_DEIRA Length = 167 Score = 52.6 bits (125), Expect = 4e-06, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 39/124 (31%), Gaps = 22/124 (17%) Query: 13 NMRAIATRDTAIEKRLASLLTGQ--GLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHH 70 RA+ T EK L L + + FR Q DFV E + ++ G Sbjct: 63 RARALRRTQTVEEKTLWLALRNRFLNVKFRRQWPMGGYVVDFVCFEAKLIVELDGS---Q 119 Query: 71 HHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEAL 130 H + + D L+ G+ VL W +R + + Sbjct: 120 HAEEAAR-----------------DYDAVRTEFLEAGGFTVLRFWNNEVRKNLEGVLLEI 162 Query: 131 TERL 134 +RL Sbjct: 163 QKRL 166 >UniRef50_Q3A652 Putative uncharacterized protein n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A652_PELCD Length = 125 Score = 52.6 bits (125), Expect = 5e-06, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 35/123 (28%), Gaps = 21/123 (17%) Query: 13 NMRAIATRDTAIEKRLA-SLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHH 71 R + + T EKR+ L FR Q P DF ++ VI G Sbjct: 11 RAREMRSNMTEPEKRMWYQCLKQLPHRFRRQRPFGPYIVDFYCASHKLVIEIDGE----- 65 Query: 72 HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALT 131 +P + D LQ LG V+ + + L Sbjct: 66 ----SHMPGEAQAY-----------DADRTVYLQGLGLHVVRFSNREVMENIEGVYARLV 110 Query: 132 ERL 134 E L Sbjct: 111 EIL 113 >UniRef50_A7HGL3 Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HGL3_ANADF Length = 1328 Score = 52.2 bits (124), Expect = 5e-06, Method: Composition-based stats. Identities = 30/146 (20%), Positives = 43/146 (29%), Gaps = 29/146 (19%) Query: 1 MADVHDKATRSKNMRA----IATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDE 56 +AD A K M + +A ++ E + L G Q R D V Sbjct: 974 LADFLRFAETGKMMASATGTVADAESPFEDEVGEALADMGYFVDRQVGVGAYRIDIGVRN 1033 Query: 57 ------YRCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWR 110 Y + G +H C +RDR L++ GW Sbjct: 1034 RDRPGIYLAGVECDGAAYHAAPCA-------------------RDRDRLRQHVLEQRGWV 1074 Query: 111 VLIVWECALRGREKLTDEALTERLEE 136 ++ VW T E L L E Sbjct: 1075 IIRVWSTDWFRDRSRTLERLKRTLAE 1100 >UniRef50_A5GAK4 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=A5GAK4_GEOUR Length = 124 Score = 52.2 bits (124), Expect = 5e-06, Method: Composition-based stats. Identities = 24/116 (20%), Positives = 34/116 (29%), Gaps = 25/116 (21%) Query: 18 ATRDTAIEKRLASLLTGQ---GLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHHCY 74 T E+ L L + GL FR Q+ DFV E R ++ G H Sbjct: 13 RRNSTDAERLLWQHLKARQLDGLKFRRQEQIGHFIADFVCYEKRIIVEADGG---QHALE 69 Query: 75 LFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEAL 130 E+D L+ G+ VL W + E + Sbjct: 70 K-------------------EKDEERTQWLKSQGFTVLRFWNNEILTNIDSVLEVV 106 >UniRef50_C6JN47 Helicase n=7 Tax=Bacteria RepID=C6JN47_FUSVA Length = 1624 Score = 51.8 bits (123), Expect = 6e-06, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 39/121 (32%), Gaps = 21/121 (17%) Query: 18 ATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFV--VDEYRCVIFTHGCFWHHHHCYL 75 D+ E+ +A L +G Q R D V + R I G WH Sbjct: 1354 KNSDSVFEEEVAKYLYARGYNIIQQWEVGAYRIDMVAFFENKRVAIECDGERWHST---- 1409 Query: 76 FKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLE 135 + V++D L+ GW + + + T + + E+LE Sbjct: 1410 ---------------EEQVKQDIERQDILERCGWDFIRIRGSRYFRNPEDTMKEVLEKLE 1454 Query: 136 E 136 + Sbjct: 1455 K 1455 >UniRef50_C7JHU4 DNA helicase n=7 Tax=Acetobacter pasteurianus RepID=C7JHU4_ACEP3 Length = 2008 Score = 51.8 bits (123), Expect = 7e-06, Method: Composition-based stats. Identities = 23/132 (17%), Positives = 38/132 (28%), Gaps = 25/132 (18%) Query: 25 EKRLASLLTGQGLAFRVQDASLPGRPDFVV------DEYRCVIFTHGCFWHHHHCYLFKV 78 E +A++L +G Q R D V + I G +H Sbjct: 1664 EVEVATMLRAKGWDVTTQVGVSGFRIDLGVVDPDLPTTFLAGIECDGATYHRS------- 1716 Query: 79 PATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLEEWI 138 +RDR + L+ LGW +L +W E + L E++ Sbjct: 1717 ------------ATARDRDRLRQAVLENLGWNILRIWSTDWWTNAPREMERVDRALNEFL 1764 Query: 139 CGEGASAQIDTQ 150 + Sbjct: 1765 EETRKKRAEQAE 1776 >UniRef50_Q2K531 Hypothetical conserved protein n=8 Tax=Rhizobium RepID=Q2K531_RHIEC Length = 196 Score = 51.8 bits (123), Expect = 7e-06, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 39/124 (31%), Gaps = 26/124 (20%) Query: 15 RAIATRDTAIEKRLASLLTGQ---GLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHH 71 R + +T E L S L + G F Q P DF+ + R ++ G F H Sbjct: 70 RQLRRNETEEEYYLWSDLRARRLNGYKFARQAPLGPFIVDFLCRDERLIVEVDG-FQH-- 126 Query: 72 HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALT 131 + D+R L G+ VL W + + E + Sbjct: 127 --------------------ADNATDQRRTEWLNANGYSVLRFWNQQISRERRSVLETIF 166 Query: 132 ERLE 135 L+ Sbjct: 167 AALQ 170 >UniRef50_B2IF32 DNA helicase, putative n=2 Tax=Rhizobiales RepID=B2IF32_BEII9 Length = 1649 Score = 51.8 bits (123), Expect = 7e-06, Method: Composition-based stats. Identities = 31/136 (22%), Positives = 43/136 (31%), Gaps = 24/136 (17%) Query: 25 EKRLASLLTGQGLAFRVQDASLPGRPDFVVDEY---RCVIFTHGCFWHHHHCYLFKVPAT 81 E+ + LT +G Q +L R D VV+ R I G +H Sbjct: 1426 ERDMFQRLTERGYRVLPQVGALGYRIDLVVEGANGQRLAIECDGDKYHG----------- 1474 Query: 82 RTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLEEW-ICG 140 E W + D R L+ +GWR W + L E L+ I Sbjct: 1475 -PERWSD--------DMRRQRILERVGWRFWRCWASSFVLNPDSCMMDLVETLDRLNIRP 1525 Query: 141 EGASAQIDTQGIHLLA 156 I +HL A Sbjct: 1526 TDEERPIGNFTLHLTA 1541 >UniRef50_A4FK03 Similar to superfamily I DNA and RNA helicases and helicase subunits n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FK03_SACEN Length = 1774 Score = 51.8 bits (123), Expect = 7e-06, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 32/112 (28%), Gaps = 22/112 (19%) Query: 25 EKRLASLLTGQGLAFRVQDASLPGRPDFVV--DEYRCVIFTHGCFWHHHHCYLFKVPATR 82 E+R+ + L +G Q + P R D VV R I G WH Y Sbjct: 1377 EQRVFNHLADRGYTVIPQYDAKPYRIDLVVIGPSARLAIECDGDHWHGPDVY-------- 1428 Query: 83 TEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERL 134 ERD L+ GW + E L L Sbjct: 1429 ------------ERDLARQRDLERCGWTFFRIRESDFYIDRPAVLRDLWSAL 1468 >UniRef50_B8ER54 Putative DNA helicase related protein n=1 Tax=Methylocella silvestris BL2 RepID=B8ER54_METSB Length = 1571 Score = 51.8 bits (123), Expect = 7e-06, Method: Composition-based stats. Identities = 26/119 (21%), Positives = 35/119 (29%), Gaps = 25/119 (21%) Query: 25 EKRLASLLTGQGLAFRVQDASLPGRPDFVVD------EYRCVIFTHGCFWHHHHCYLFKV 78 E +A+ + G Q S R D V + + G +H Sbjct: 1257 EANVAAAIESMGFTVESQVGSAGFRIDLAVRDPARPGRFILGVECDGATYH--------- 1307 Query: 79 PATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLEEW 137 + W ERDR L+ LGWRV +W R L LE Sbjct: 1308 ----SALWA------RERDRLRQEVLEGLGWRVHRIWSTDWFYRRDEQLRKLKAALEAA 1356 >UniRef50_C8WWU3 Superfamily I DNA and RNA helicase and helicase subunits-like protein n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WWU3_ALIAD Length = 1403 Score = 51.4 bits (122), Expect = 8e-06, Method: Composition-based stats. Identities = 23/131 (17%), Positives = 41/131 (31%), Gaps = 26/131 (19%) Query: 25 EKRLASLLTGQGLAFRVQDASLPGRPDFVVD------EYRCVIFTHGCFWHHHHCYLFKV 78 E+ +A+ L G Q R D + Y + G +H Sbjct: 1283 EEEVATELRKLGYTVNTQVGFSGYRIDLAIVDPDNPERYLLAVECDGATYH--------- 1333 Query: 79 PATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLEEWI 138 K+ + ERD L++ GW V VW + E + R+ + + Sbjct: 1334 --------SSKVAR--ERDFYRQRFLEQHGWNVHRVWSRNWLKAKHKEIEKIQSRIRQ-L 1382 Query: 139 CGEGASAQIDT 149 + ++ T Sbjct: 1383 KEQHHVVELST 1393 >UniRef50_Q13ET6 Putative uncharacterized protein n=4 Tax=Rhodopseudomonas palustris RepID=Q13ET6_RHOPS Length = 194 Score = 51.4 bits (122), Expect = 9e-06, Method: Composition-based stats. Identities = 21/137 (15%), Positives = 41/137 (29%), Gaps = 26/137 (18%) Query: 4 VHDKATRSKNMRAIATRDTAIEKRLASLLTGQ---GLAFRVQDASLPGRPDFVVDEYRCV 60 + R R + T E+ + S L + G +FR Q P DF + V Sbjct: 41 NVSPSLRRH-ARELRKTSTDAERLMWSALRDKQLNGFSFRRQVPIGPFIADFACHSVKLV 99 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVER-DRRDISRLQELGWRVLIVWECAL 119 + G + + ER D + ++ G+R++ + Sbjct: 100 VEIDG---------------------GQHFSDDAERADASRTALIEARGFRIVRFSNAEV 138 Query: 120 RGREKLTDEALTERLEE 136 +++ L Sbjct: 139 MSNRDGVLQSIAAELAA 155 >UniRef50_A9VZY5 Putative uncharacterized protein n=1 Tax=Methylobacterium extorquens PA1 RepID=A9VZY5_METEP Length = 2045 Score = 51.4 bits (122), Expect = 9e-06, Method: Composition-based stats. Identities = 26/131 (19%), Positives = 36/131 (27%), Gaps = 25/131 (19%) Query: 19 TRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVD------EYRCVIFTHGCFWHHHH 72 D+ E +A L +G Q R D + + + G +H Sbjct: 1578 RADSDFEVEVARRLQREGFQVDHQVGVSGFRIDLGIRHPDYPERFIAGVECDGARYH--- 1634 Query: 73 CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTE 132 K + +RDR L LGW +L VW L L Sbjct: 1635 --------------SSKSAR--DRDRLREEVLTALGWNILRVWSTDWFDNPDLQTRNLVS 1678 Query: 133 RLEEWICGEGA 143 RL E Sbjct: 1679 RLRELQAAPRP 1689 >UniRef50_C7I4I2 Biotin/acetyl-CoA-carboxylase ligase n=1 Tax=Thiomonas intermedia K12 RepID=C7I4I2_THIIN Length = 445 Score = 51.4 bits (122), Expect = 9e-06, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 36/126 (28%), Gaps = 25/126 (19%) Query: 13 NMRAIATRDTAIEKRLASLLT--GQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHH 70 R + T E+ L S ++ G FR Q P DF R V+ G Sbjct: 37 RARQLRRDMTDAERLLWSRVSNGQLGSKFRRQVPIGPYIADFTCAAARLVVELDGE---Q 93 Query: 71 HHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEAL 130 H+ D + ++ G+ VL W + + Sbjct: 94 HNECPH--------------------DALRDAFFRQKGYEVLRFWNNDVLANIAGVLLTI 133 Query: 131 TERLEE 136 +E+ Sbjct: 134 QSAVEQ 139 >UniRef50_D1BJC4 Putative uncharacterized protein n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BJC4_SANKS Length = 1823 Score = 51.4 bits (122), Expect = 1e-05, Method: Composition-based stats. Identities = 22/127 (17%), Positives = 35/127 (27%), Gaps = 25/127 (19%) Query: 25 EKRLASLLTGQGLAFRVQDASLPGRPDFVVD------EYRCVIFTHGCFWHHHHCYLFKV 78 E+ + + G Q + R D V + + G Sbjct: 1511 EEDVIREIQAMGYDVVPQVGTAGYRIDIGVVHPTEPGRFILAVECDG------------- 1557 Query: 79 PATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLEEWI 138 + K+ + +RDR L LGW V +W + + E L L E Sbjct: 1558 ----AAYHSSKVAR--DRDRLREGVLTRLGWTVFRIWGLSWARDRRTQVERLRRALAEAT 1611 Query: 139 CGEGASA 145 A Sbjct: 1612 DAREAPR 1618 >UniRef50_UPI0001904206 hypothetical protein RetlK5_22563 n=1 Tax=Rhizobium etli Kim 5 RepID=UPI0001904206 Length = 126 Score = 51.0 bits (121), Expect = 1e-05, Method: Composition-based stats. Identities = 17/117 (14%), Positives = 29/117 (24%), Gaps = 23/117 (19%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQ---GLAFRVQDASLPGRPDFVVDEY 57 M + + + T E + +L G FR + P DF Sbjct: 1 MPPSNITPKTRDTAKRLRRELTKAEAAMWDMLRDLRPYGARFRRETPIGPYIADFAWLSA 60 Query: 58 RCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIV 114 R ++ G H + D + L+ G+ V Sbjct: 61 RLIVEVDGD---SHETVEGR-----------------RHDLARDAFLRSQGFTVQRF 97 >UniRef50_C5PWZ9 Putative uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=C5PWZ9_9SPHI Length = 113 Score = 51.0 bits (121), Expect = 1e-05, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 44/130 (33%), Gaps = 24/130 (18%) Query: 11 SKNMRAIATRD-TAIEKRLASLLTG---QGLAFRVQDASLPGRPDFVVDEYRCVIFTHGC 66 SK+ R RD T E +L+ GL FR Q DF + + V+ G Sbjct: 3 SKSFRRQLRRDQTPAETTFWNLVRSHRLNGLKFRRQHTICNYIVDFYCPKLKLVVELDGS 62 Query: 67 FWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLT 126 H + D +L+ +G++V+ + A+ ++ Sbjct: 63 ---VHD----NLGQAN-------------YDHEREIKLRSMGYKVIRIENEAVLKNPEVA 102 Query: 127 DEALTERLEE 136 L +++ Sbjct: 103 LMYLLNFIKQ 112 >UniRef50_B8H1P3 Hypothetical cytosolic protein n=3 Tax=Caulobacteraceae RepID=B8H1P3_CAUCN Length = 146 Score = 51.0 bits (121), Expect = 1e-05, Method: Composition-based stats. Identities = 21/134 (15%), Positives = 33/134 (24%), Gaps = 23/134 (17%) Query: 6 DKATRSKNMRAIATRDTAIEKRLASLLTG---QGLAFRVQDASLPGRPDFVVDEYRCVIF 62 R + + E RL + L GL FR Q DF + I Sbjct: 3 TPRDTVTTARRLRREMSPPEARLWAALRRGGLDGLKFRRQHPMGRCVLDFYCPSLKLAIE 62 Query: 63 THGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGR 122 G + + + P RD L G R L + + Sbjct: 63 VDG-----YAHCINERP---------------TRDAARDQWLLAQGVRTLRIPAHDVLES 102 Query: 123 EKLTDEALTERLEE 136 + + + Sbjct: 103 VEGALGQIRTFMAA 116 >UniRef50_C6XHF9 Putative uncharacterized protein n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XHF9_LIBAP Length = 1775 Score = 51.0 bits (121), Expect = 1e-05, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 47/156 (30%), Gaps = 29/156 (18%) Query: 1 MADVHDKATRSKNMRAIATRDTAIE----KRLASLLTGQGLAFRVQDASLPGRPDFVVDE 56 M D A ++ T+ + + + L G A Q + D VV + Sbjct: 1638 MRDFLHFAETGYMEHSLKTKTNKQDSDFAVSVVNELEKTGFACDSQLGDMGFSIDVVVRD 1697 Query: 57 ------YRCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWR 110 Y I G + K + +RDR L+ +GWR Sbjct: 1698 PNNPGHYLMGIECDG-----------------AMYNSAKSAR--DRDRLRQEVLERMGWR 1738 Query: 111 VLIVWECALRGREKLTDEALTERLEEWICGEGASAQ 146 + +W E + L E I + +S + Sbjct: 1739 IRRIWSVDWFSNPDEVIEPIIRELRELISQKSSSTR 1774 >UniRef50_B7R5W0 Putative uncharacterized protein n=1 Tax=Carboxydibrachium pacificum DSM 12653 RepID=B7R5W0_9THEO Length = 1506 Score = 50.6 bits (120), Expect = 1e-05, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 41/133 (30%), Gaps = 23/133 (17%) Query: 5 HDKATRSKNMRAIATRDTAI-EKRLASLLTGQGLAFRVQDASLPGRPDFVV--DEYRCVI 61 D ++ + + R + E+ + L G Q D VV R I Sbjct: 1345 LDPEAVTRAVARESARTQSPFEQEVLKRLIAAGYRTYAQWPVGYYVIDLVVEGSGNRVAI 1404 Query: 62 FTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRG 121 G WH + K+P D + L+ LGW+ + + Sbjct: 1405 ECDGDRWH----PIEKLPE----------------DLARQAVLERLGWKFIRIRGSEFYR 1444 Query: 122 REKLTDEALTERL 134 T E + E+L Sbjct: 1445 DPDGTMEWVFEQL 1457 >UniRef50_A0P3H1 Putative uncharacterized protein n=2 Tax=cellular organisms RepID=A0P3H1_9RHOB Length = 2015 Score = 50.6 bits (120), Expect = 2e-05, Method: Composition-based stats. Identities = 30/135 (22%), Positives = 43/135 (31%), Gaps = 26/135 (19%) Query: 15 RAIATRDTAI-----EKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTH----G 65 RA+ + + E +A L +G R Q R D V H G Sbjct: 1633 RAVRSYGNSDYDSDFEMAVAERLRAKGWTIRTQIGVSKFRIDLGV--------VHPDKPG 1684 Query: 66 CFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKL 125 F C ++ + +RDR L+ LGWR+L VW + Sbjct: 1685 EFLAGIECDGAAYHSSASA---------RDRDRVRHIILERLGWRLLRVWSTDWFIDPRS 1735 Query: 126 TDEALTERLEEWICG 140 E L LE + Sbjct: 1736 RLEQLHHDLEVLLET 1750 >UniRef50_C8TQY9 Conserved predicted protein n=17 Tax=Proteobacteria RepID=C8TQY9_ECO26 Length = 116 Score = 50.2 bits (119), Expect = 2e-05, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 37/128 (28%), Gaps = 25/128 (19%) Query: 12 KNMRAIATRDTAIEKRLASLLTGQ---GLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFW 68 N R + T E++L L + FR Q DF R V+ G Sbjct: 6 SNARDLRRNLTLQERKLWRYLRSRRFGDFKFRRQHPVGSYILDFACCSARVVVELDGG-- 63 Query: 69 HHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDE 128 H V D R S L+ W VL W + E+ E Sbjct: 64 -QHDLA-------------------VAYDTRRTSWLESQSWTVLRFWHNEIDCNEEAVLE 103 Query: 129 ALTERLEE 136 + + L Sbjct: 104 IILQELNR 111 >UniRef50_C7IBV6 Superfamily I DNA and RNA helicase and helicase subunits-like protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IBV6_9CLOT Length = 2128 Score = 50.2 bits (119), Expect = 2e-05, Method: Composition-based stats. Identities = 26/117 (22%), Positives = 39/117 (33%), Gaps = 15/117 (12%) Query: 25 EKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRC-VIFTHGCFWHHHHCYLFKVPATRT 83 E+ + L G Q R D V IF G C + RT Sbjct: 1810 EESVYDFLVKNGYQVATQVGCSGYRIDMAVKHPTLSGIFVIGI-----ECDGATYHSART 1864 Query: 84 EFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLEEWICG 140 ERDR + L+++GW++ +W K L E +++ I G Sbjct: 1865 A---------RERDRLRQTVLEDIGWKIYRIWSTDWIKDPKTEGAKLIEAVKQAIEG 1912 >UniRef50_A1KA28 Putative uncharacterized protein ycjD n=1 Tax=Azoarcus sp. BH72 RepID=A1KA28_AZOSB Length = 123 Score = 50.2 bits (119), Expect = 2e-05, Method: Composition-based stats. Identities = 28/137 (20%), Positives = 41/137 (29%), Gaps = 28/137 (20%) Query: 15 RAIATRDTAIEKRLASLLTG--QGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHH 72 R + T E+ L L G G FR Q DFV E + V+ G Sbjct: 13 RNLRRNSTDAERVLWRHLRGGQFGAKFRRQHPFADYVLDFVCLELKLVVELDG------G 66 Query: 73 CYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTE 132 + + V D + L+ G+ V+ W + A+ E Sbjct: 67 QHAER----------------VAYDDARTAILRTAGFDVIRFWNSEVFQEPD----AVVE 106 Query: 133 RLEEWICGEGASAQIDT 149 RL I G + Sbjct: 107 RLRLVIEGRRPLFEARG 123 >UniRef50_C1DMG9 Putative uncharacterized protein n=2 Tax=Proteobacteria RepID=C1DMG9_AZOVD Length = 120 Score = 50.2 bits (119), Expect = 2e-05, Method: Composition-based stats. Identities = 28/123 (22%), Positives = 39/123 (31%), Gaps = 25/123 (20%) Query: 11 SKNMRAIATRDTAIEKRLASLLTG---QGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCF 67 RA+ T E+RL L GL FR Q DFV E R ++ G Sbjct: 2 RDRARALRRGMTEAEQRLWYHLRAHRFLGLKFRRQAPLGRYIVDFVCMELRLIVELDG-- 59 Query: 68 WHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTD 127 + + V DRR L+E + VL W + + Sbjct: 60 ----GQHAGQ----------------VAYDRRRDDWLRERDFTVLRFWNHQALQQTEAVL 99 Query: 128 EAL 130 E + Sbjct: 100 ERI 102 >UniRef50_Q21U02 DNA helicase related protein n=19 Tax=cellular organisms RepID=Q21U02_RHOFD Length = 2222 Score = 50.2 bits (119), Expect = 2e-05, Method: Composition-based stats. Identities = 23/138 (16%), Positives = 42/138 (30%), Gaps = 33/138 (23%) Query: 25 EKRLASLLTGQGL---------AFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHHCYL 75 E +A+ L +G +FR+ + PDF Y + G +H Sbjct: 1862 EASVATALGRKGWQVHTQIGASSFRLDLGVV--HPDFA-GRYLAGVECDGATYHRS---- 1914 Query: 76 FKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLE 135 +RD+ L+ LGW ++ +W T E + L Sbjct: 1915 ---------------ATARDRDKLREQVLRGLGWEIVRIWSTDWWVNPGGTLERVHAALT 1959 Query: 136 EWICGEGASA--QIDTQG 151 E + + + + Sbjct: 1960 ELLEKDRERRANEAEVPP 1977 >UniRef50_A5VDE8 Putative uncharacterized protein n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VDE8_SPHWW Length = 126 Score = 49.9 bits (118), Expect = 3e-05, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 21/64 (32%), Gaps = 2/64 (3%) Query: 4 VHDKATRSKNMRAIATRDTAIEKRLASLLTGQG--LAFRVQDASLPGRPDFVVDEYRCVI 61 T R + + E L LL +G FR Q + P DF E R + Sbjct: 10 TLPSPTPRARARQLRREMSLPEVLLWRLLRNKGAGFRFRRQHPAGPYVLDFYCPELRLAV 69 Query: 62 FTHG 65 G Sbjct: 70 EVDG 73 >UniRef50_B1XR21 Putative uncharacterized protein n=4 Tax=Cyanobacteria RepID=B1XR21_SYNP2 Length = 166 Score = 49.9 bits (118), Expect = 3e-05, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 44/147 (29%), Gaps = 41/147 (27%) Query: 9 TRSKNMRAIATRDTAIEK----------------RLASLLTGQ---GLAFRVQDASLPGR 49 T+SK+MR R T E +L + G+ G FR Q Sbjct: 41 TQSKHMRYRRIRGTTPEIEAAARRLRDNLTPAEAKLWEAIRGKQLDGFKFRCQHPVEQFI 100 Query: 50 PDFVVDEYRCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGW 109 DF + V+ G H R E+ D+ +L+ LG+ Sbjct: 101 LDFYCPSCKLVVEIDGEI-HR----------DRQEY-----------DQARTEKLETLGY 138 Query: 110 RVLIVWECALRGREKLTDEALTERLEE 136 RV + E + +L Sbjct: 139 RVTRFSNDEVIHNLGDVLERIRAQLRS 165 >UniRef50_Q8VPS7 Putative uncharacterized protein n=1 Tax=Burkholderia sacchari RepID=Q8VPS7_9BURK Length = 121 Score = 49.9 bits (118), Expect = 3e-05, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 34/118 (28%), Gaps = 26/118 (22%) Query: 22 TAIEKRLASLLTGQ---GLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHHCYLFKV 78 T E+ L L G FR Q P DF+ R +I G + Sbjct: 2 TNAEQLLWRHLRAHRLCGEKFRRQHPIGPYIVDFMHFGARLIIEADG------GQHNGSA 55 Query: 79 PATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLEE 136 + W L+ G++VL W + + E + + E Sbjct: 56 TDAVRDTW-----------------LRTRGFKVLRFWNDEILSNVDVVLEVILGDIAE 96 >UniRef50_B0MKF4 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MKF4_9FIRM Length = 130 Score = 49.9 bits (118), Expect = 3e-05, Method: Composition-based stats. Identities = 23/144 (15%), Positives = 47/144 (32%), Gaps = 22/144 (15%) Query: 4 VHDKATRSKNMRAIATRDTAIEKRLAS-LLTGQGLAFRVQDASLPGRPDFVVDEYRCVIF 62 +H+K S + + ++ T E++L L + F Q DF + + VI Sbjct: 8 IHNKQLVSY-AKKLRSQMTDEERKLWYCYLKEYPVRFIRQKVLFKYIADFYCPKAKLVIE 66 Query: 63 THGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGR 122 G + K +E D+ + L G VL ++ Sbjct: 67 LDG------SQHYE--------------EKEMEYDKERTAFLNSKGIMVLRFTNSSIHNE 106 Query: 123 EKLTDEALTERLEEWICGEGASAQ 146 + E + + + + + A+ Sbjct: 107 FRNVCEYIEQTVNKRMENISYKAE 130 >UniRef50_A0L4F1 Superfamily I DNA and RNA helicase and helicase subunit n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L4F1_MAGSM Length = 1973 Score = 49.5 bits (117), Expect = 3e-05, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 46/125 (36%), Gaps = 17/125 (13%) Query: 16 AIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPD--FVVDEYRCVIFTHGCFWHHHHC 73 +I D+ E+ ++ LT +G Q R D V + F C Sbjct: 1616 SIGGYDSPFEEAVSEALTRKGWRVHSQIGVSAFRIDLGIVHPQREGHYFV------GVEC 1669 Query: 74 YLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTER 133 ++ T +RD+ + L+ LGWR++ VW K T E L +R Sbjct: 1670 DGATYHSSATA---------RDRDKVREAILERLGWRLVRVWSLDWWVNPKDTLEKLDQR 1720 Query: 134 LEEWI 138 ++ + Sbjct: 1721 IQAIL 1725 >UniRef50_C6P535 Putative uncharacterized protein n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P535_9PROT Length = 624 Score = 49.5 bits (117), Expect = 3e-05, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 36/133 (27%), Gaps = 23/133 (17%) Query: 7 KATRSKNMRAIATRDTAIEKRLASLLTG---QGLAFRVQDASLPGRPDFVVDEYRCVIFT 63 T N R + T E+ L LL FR Q DF E + I Sbjct: 216 PETLLSNARELRKNSTDAEQLLWQLLRSHQLLDHKFRRQHPLGSYILDFYCHETKLAIEL 275 Query: 64 HGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGRE 123 G H ++ D + L+ G VL W + Sbjct: 276 DG----GQHAEGAQLKH----------------DEMRSAWLKTQGITVLRFWNNDVLTNT 315 Query: 124 KLTDEALTERLEE 136 + + + + L Sbjct: 316 EGVLQTIFDCLSA 328 >UniRef50_Q4UU23 DNA helicase related protein n=3 Tax=Proteobacteria RepID=Q4UU23_XANC8 Length = 1868 Score = 49.5 bits (117), Expect = 3e-05, Method: Composition-based stats. Identities = 24/137 (17%), Positives = 39/137 (28%), Gaps = 26/137 (18%) Query: 25 EKRLASLLTGQGLAFRVQDASLPGRPDFVVD------EYRCVIFTHGCFWHHHHCYLFKV 78 E+ +A L +G D V Y I G Sbjct: 1545 EQEVAQALRARGYDLHTDVGLAGFFVDIAVSNPEEPGRYILGIECDG------------- 1591 Query: 79 PATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLEEWI 138 + + + +RDR S L++ GW+V +W R + E L +E Sbjct: 1592 ----QSYRDARSAR--DRDRLRESVLRDKGWQVYRIWSSDWFHRPEAELEKLVVAIERA- 1644 Query: 139 CGEGASAQIDTQGIHLL 155 E + + H Sbjct: 1645 KSESGTLEPSPNSSHRA 1661 >UniRef50_Q8KC08 DNA helicase, putative n=2 Tax=Bacteria RepID=Q8KC08_CHLTE Length = 1510 Score = 49.5 bits (117), Expect = 3e-05, Method: Composition-based stats. Identities = 28/133 (21%), Positives = 37/133 (27%), Gaps = 31/133 (23%) Query: 25 EKRLASLLTGQGLAFRVQDASLPGRPDFVVDEY---RCVIFTHGCFWHHHHCYLFKVPAT 81 E+ + S L +G Q + R D VV+ R I G +H Sbjct: 1385 EREVYSALVERGYRVIPQVRTGAYRIDMVVEGAGDLRLAIECDGDAFHG----------- 1433 Query: 82 RTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWEC---ALRGREKLTDEALTERLEEWI 138 + W D L+ GW W C R + LTERL Sbjct: 1434 -PDRW--------PHDLARQRVLERAGWT---FWRCFASTWRLHKDEVLGELTERLSAM- 1480 Query: 139 CGEGASAQIDTQG 151 G I Sbjct: 1481 -GIEPLGSIARAP 1492 >UniRef50_B5UW08 Putative uncharacterized protein n=1 Tax=Bacillus cereus AH1134 RepID=B5UW08_BACCE Length = 155 Score = 49.5 bits (117), Expect = 3e-05, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 42/116 (36%), Gaps = 22/116 (18%) Query: 25 EKRLASLLTGQGLAFRVQDASLPGRPDFVV---DEYRCVIFTHGCFWHHHHCYLFKVPAT 81 E+++ L G++ VQ+ R DF V + + I G +H+ K Sbjct: 42 ERKVYDHLRYMGISPTVQEKVGKYRLDFAVFGANGKKLCIEVDGYIFHNTPEAKKK---- 97 Query: 82 RTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLEEW 137 DR + L+++GW +L + + L+ + +L + Sbjct: 98 ---------------DRVRDAYLKKMGWEILRLSDRQLKEDLHACMRKIEAKLYDM 138 >UniRef50_Q11GI6 Putative uncharacterized protein n=2 Tax=Rhizobiales RepID=Q11GI6_MESSB Length = 118 Score = 49.5 bits (117), Expect = 4e-05, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 34/125 (27%), Gaps = 27/125 (21%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQ---GLAFRVQDASLPGRPDFVVDEY 57 M R+ R + T E L L + GL FR Q DFV E Sbjct: 1 MRQAVPPPHRTY-ARTMRADATKAENLLWQALRNKKLEGLKFRRQVPLDGYILDFVCFEA 59 Query: 58 RCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWEC 117 R ++ G + + RD + G++ L W Sbjct: 60 RLILEVDG------GQHSGAI-----------------RDAVRDRHFEARGFKTLRFWND 96 Query: 118 ALRGR 122 + Sbjct: 97 EVEKN 101 >UniRef50_D2LHC1 Putative DNA helicase n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LHC1_RHOVA Length = 1994 Score = 49.1 bits (116), Expect = 4e-05, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 34/126 (26%), Gaps = 25/126 (19%) Query: 25 EKRLASLLTGQGLAFRVQDASLPGRPDF------VVDEYRCVIFTHGCFWHHHHCYLFKV 78 E + L +G Q R D Y + G +H Sbjct: 1638 EDAVKKALEQKGWQVHPQVGVSGFRVDLGVVHPDAPGRYLAGVECDGATYHRS------- 1690 Query: 79 PATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLEEWI 138 +RDR L+ LGWR+L VW L RL E + Sbjct: 1691 ------------ATARDRDRLREGVLRNLGWRILRVWSTDWWVDPDSAFAHLNARLTEHL 1738 Query: 139 CGEGAS 144 + + Sbjct: 1739 ECDRTA 1744 >UniRef50_Q60CT2 Conserved domain protein n=5 Tax=Proteobacteria RepID=Q60CT2_METCA Length = 128 Score = 49.1 bits (116), Expect = 4e-05, Method: Composition-based stats. Identities = 27/131 (20%), Positives = 40/131 (30%), Gaps = 27/131 (20%) Query: 18 ATRDTAIEKRLASLLTG---QGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHHCY 74 T +++L L GL F+ Q DFV EY VI G + Sbjct: 11 RANQTEADQQLWYHLRARRFMGLKFKRQKPIGSYIADFVCMEYGLVIEVDG------GQH 64 Query: 75 LFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERL 134 E DRR + +E G+ VL W + G E + + Sbjct: 65 GG------------------ESDRRRDAWFREHGFTVLRFWNNEVLGETAAVLERIRVEI 106 Query: 135 EEWICGEGASA 145 G ++ Sbjct: 107 LALSPGPSPAS 117 >UniRef50_UPI000179168A PREDICTED: similar to C25F9.2 n=1 Tax=Acyrthosiphon pisum RepID=UPI000179168A Length = 717 Score = 49.1 bits (116), Expect = 4e-05, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 25/66 (37%), Gaps = 12/66 (18%) Query: 64 HGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERD-----RRDISRLQELGWRVLIVWECA 118 HGCFWH + + + N D R +L + G++V +W C Sbjct: 264 HGCFWHGCPDCF----NSNE---INPVNNNTMSDLYNDTIRRTVKLTQKGYQVEEMWSCK 316 Query: 119 LRGREK 124 L+ + Sbjct: 317 LKKHQD 322 >UniRef50_B9JEI7 Putative uncharacterized protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JEI7_AGRRK Length = 183 Score = 49.1 bits (116), Expect = 5e-05, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 35/112 (31%), Gaps = 26/112 (23%) Query: 6 DKATRSKNMRAIATRDTAIEKRLASLLTG---QGLAFRVQDASLPGRPDFVVDEYRCVIF 62 K+ ++ R + D E +L S L GL F Q P DF E V+ Sbjct: 35 PKSETTQRARILRQSDNDAEAKLWSELRDHRLNGLKFVRQHPVGPYFADFACRERLLVVE 94 Query: 63 THGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIV 114 G I N RDRR + + GW V+ Sbjct: 95 VDG---------------------ASHI--NNFRDRRRDALMNNEGWSVVRF 123 >UniRef50_Q47S09 Similar to Superfamily I DNA and RNA helicases and helicase subunits n=2 Tax=Nocardiopsaceae RepID=Q47S09_THEFY Length = 1490 Score = 49.1 bits (116), Expect = 5e-05, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 36/114 (31%), Gaps = 22/114 (19%) Query: 25 EKRLASLLTGQGLAFRVQDASLPGRPDFVVDE--YRCVIFTHGCFWHHHHCYLFKVPATR 82 E+R+ L +G Q R D VV+ R + G +H+ Sbjct: 1381 EQRVFLALRDRGYRVYPQYQVGRYRIDLVVEGGSRRLAVECDGDAYHN------------ 1428 Query: 83 TEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLEE 136 +N D L+ +GW + + + + L +RL E Sbjct: 1429 --------EENAAEDAARQRELERVGWTFVRIRGSRFFRDPEAALQPLWQRLAE 1474 >UniRef50_Q1GTS1 Putative uncharacterized protein n=1 Tax=Sphingopyxis alaskensis RepID=Q1GTS1_SPHAL Length = 175 Score = 49.1 bits (116), Expect = 5e-05, Method: Composition-based stats. Identities = 25/142 (17%), Positives = 47/142 (33%), Gaps = 29/142 (20%) Query: 15 RAIATRDTAIEKRLASLLTG---QGLAFRVQDA-SLPGRPDFVVDEYRCVIFTHGCFWHH 70 R + + T E+ L S+L +GL +R Q+ DF+ E+R ++ G Sbjct: 45 RQMRSNPTDAERHLWSILRAGRLEGLRWRRQEVIDDRYIADFLCYEHRLIVEADGG---Q 101 Query: 71 HHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEAL 130 H D + L G+R+L W + + ++ Sbjct: 102 HGDNPH--------------------DAERDTYLTAQGFRILRFWNNDILANSEGLVASI 141 Query: 131 TERLEEWICGEGASAQIDTQGI 152 + ++ G A Q + Sbjct: 142 LDAIDS--LGAQTRADPTPQPL 161 >UniRef50_Q2N7D3 Putative uncharacterized protein n=1 Tax=Erythrobacter litoralis HTCC2594 RepID=Q2N7D3_ERYLH Length = 119 Score = 48.7 bits (115), Expect = 5e-05, Method: Composition-based stats. Identities = 30/127 (23%), Positives = 45/127 (35%), Gaps = 24/127 (18%) Query: 12 KNMRAIATRDTAIEKRLASLLTGQ--GLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWH 69 K R + T E+RL L+ G F Q P DF+ E + VI G F H Sbjct: 10 KRARKLRNTATPAEQRLWQHLSRSQPGAKFSRQMPVGPWYADFLCRELKLVIELDG-FSH 68 Query: 70 HHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEA 129 P +RD R + L+ELG+ VL + + A Sbjct: 69 ------DVQP---------------DRDERRDADLRELGYHVLHFTNADVMNNTEGVVIA 107 Query: 130 LTERLEE 136 + ++ + Sbjct: 108 IQRKIAD 114 >UniRef50_D1J826 Putative uncharacterized protein n=1 Tax=Mycoplasma hominis ATCC 23114 RepID=D1J826_MYCHP Length = 1572 Score = 48.7 bits (115), Expect = 5e-05, Method: Composition-based stats. Identities = 22/132 (16%), Positives = 39/132 (29%), Gaps = 30/132 (22%) Query: 17 IATRDTAI-----EKRLASLLTGQGLAFRVQDASLPGRPDFVV------DEYRCVIFTHG 65 I DT I E ++ L G Q + D + +Y I G Sbjct: 1234 ILQDDTKIFDSEFEIQVYDELKKLGFKVNTQVGCSKFKIDLAIVDDKNPSKYILGIECDG 1293 Query: 66 CFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKL 125 +H K + +RD L+ GW + +W +K Sbjct: 1294 ATYH-----------------SSKSAR--DRDAIRQMLLESRGWIIHRIWSLNWFKNKKR 1334 Query: 126 TDEALTERLEEW 137 E + +++ + Sbjct: 1335 ELEKIVDKVNQI 1346 >UniRef50_Q3ADV2 Conserved domain protein n=2 Tax=Bacteria RepID=Q3ADV2_CARHZ Length = 175 Score = 48.7 bits (115), Expect = 5e-05, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 37/126 (29%), Gaps = 24/126 (19%) Query: 16 AIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVV-----DEYRCVIFTHGCFWHH 70 I D+ E+ + + L +G Q + D + +Y I G Sbjct: 57 KIKPFDSGFEEEVYNALVKRGYIVDNQVGVAGYKIDLAIYDPIQSKYVLGIECDG----- 111 Query: 71 HHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEAL 130 + K + ERD L+ GW++ +W + E + Sbjct: 112 ------------AAYHSSKNAR--ERDIHRQRFLESKGWKIYRIWSRDWWENPQNEIEKI 157 Query: 131 TERLEE 136 + L Sbjct: 158 EKYLNA 163 >UniRef50_A5G8Z3 Putative uncharacterized protein n=2 Tax=Geobacter RepID=A5G8Z3_GEOUR Length = 125 Score = 48.7 bits (115), Expect = 5e-05, Method: Composition-based stats. Identities = 21/117 (17%), Positives = 32/117 (27%), Gaps = 23/117 (19%) Query: 22 TAIEKRLASLLTG---QGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHHCYLFKV 78 T EK + + GL F Q + P DF + + G H+ Sbjct: 22 TEAEKIFWAHVRNGQFHGLKFFRQYSVGPYILDFYSPFNKLAVELDGG---QHNQ----- 73 Query: 79 PATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLE 135 + E D L G VL W + + + E+L Sbjct: 74 ------------AEIREYDAARSEYLNAHGIEVLRFWNHDVLLDVQSVLSRVEEKLT 118 >UniRef50_Q3KAE1 Putative uncharacterized protein n=1 Tax=Pseudomonas fluorescens Pf0-1 RepID=Q3KAE1_PSEPF Length = 123 Score = 48.7 bits (115), Expect = 5e-05, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 40/135 (29%), Gaps = 24/135 (17%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQ---GLAFRVQDASLPGRPDFVVDEY 57 M + R R + T E+ L L + GL FR Q P DF E Sbjct: 1 MQNRPTLDQRRF-ARHLRASQTDCEQLLWQKLRARQVAGLKFRRQVPVPPFVLDFYCVEL 59 Query: 58 RCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWEC 117 + + G H ++ DRR + LQ LG V+ Sbjct: 60 KLAVELDGG---QHFEEAGEI-----------------HDRRRTAYLQRLGIEVVRFSNL 99 Query: 118 ALRGREKLTDEALTE 132 + + E + Sbjct: 100 EVIQQMSDVLEQIVR 114 >UniRef50_A8IGF2 Uncharacterized protein n=2 Tax=Rhizobiales RepID=A8IGF2_AZOC5 Length = 291 Score = 48.7 bits (115), Expect = 6e-05, Method: Composition-based stats. Identities = 26/138 (18%), Positives = 37/138 (26%), Gaps = 27/138 (19%) Query: 2 ADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQ---GLAFRVQDASLPGRPDFVVDEYR 58 A N +A+ T E L L G FR Q DFV R Sbjct: 94 AHRPISPRLKGNAKALRREMTDAELTLWQHLRAHRLEGAPFRRQAPMGRYVADFVCHPAR 153 Query: 59 CVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECA 118 ++ G H D+ + G+ V+ W Sbjct: 154 LIVELDGG-QHGGPE-----------------------DQARDNWFAAQGYAVVRYWNND 189 Query: 119 LRGREKLTDEALTERLEE 136 + G E L+ R+ E Sbjct: 190 VLGNLGGVLEDLSARVIE 207 >UniRef50_B0G6N8 Putative uncharacterized protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G6N8_9FIRM Length = 59 Score = 48.7 bits (115), Expect = 6e-05, Method: Composition-based stats. Identities = 10/35 (28%), Positives = 14/35 (40%) Query: 7 KATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRV 41 R K M I ++T IE L L +G + Sbjct: 12 TEQRRKTMSKIRGKNTTIEVTLQKALWAKGYRYLR 46 >UniRef50_A0P3K7 Putative uncharacterized protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P3K7_9RHOB Length = 120 Score = 48.7 bits (115), Expect = 6e-05, Method: Composition-based stats. Identities = 28/137 (20%), Positives = 40/137 (29%), Gaps = 23/137 (16%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQ---GLAFRVQDASLPGRPDFVVDEY 57 M+ H A+ + R + T EK L L G+ R Q P DFVV Sbjct: 1 MSPTHIDASTRELARKLRRDQTKGEKALWRALRELKADGIHIRRQAPIGPYVADFVVFSR 60 Query: 58 RCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWEC 117 VI G H D R + L G+++L Sbjct: 61 NLVIEIDGDI-HALPDQEQH-------------------DERRTAWLSAEGFQILRYSSL 100 Query: 118 ALRGREKLTDEALTERL 134 + + + RL Sbjct: 101 QVHENLEGVVLDIRRRL 117 >UniRef50_D0KVV0 Putative uncharacterized protein n=2 Tax=Halothiobacillus neapolitanus c2 RepID=D0KVV0_HALNC Length = 123 Score = 48.7 bits (115), Expect = 6e-05, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 32/107 (29%), Gaps = 23/107 (21%) Query: 11 SKNMRAIATRDTAIEKRLASLLTGQ---GLAFRVQDASLPGRPDFVVDEYRCVIFTHGCF 67 + R + + T E+ L L + G+AF Q L DF R V+ G Sbjct: 9 RQTARHLRSNMTDAEQVLWRHLRRKQVCGVAFYRQKPLLTYIVDFYCPRARLVVELDG-- 66 Query: 68 WHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIV 114 H D+ + L LG +VL Sbjct: 67 --GQHFTTAHQGK----------------DQTRDAALSSLGMKVLRF 95 >UniRef50_Q1N8N9 Putative uncharacterized protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N8N9_9SPHN Length = 108 Score = 48.7 bits (115), Expect = 6e-05, Method: Composition-based stats. Identities = 16/118 (13%), Positives = 28/118 (23%), Gaps = 22/118 (18%) Query: 27 RLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHHCYLFKVPATRTEFW 86 + L+ F Q P D + + G Sbjct: 1 MVWRRLSRYRPRFTRQLVIGPYIVDIACRSAKLALEFDG--------------------- 39 Query: 87 LEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLEEWICGEGAS 144 + V D + L++ GW VL W + + + E + G Sbjct: 40 -AQHQDTVVYDAVRTAFLKDRGWTVLRFWNGEVFSNLEGVLTVILNATAECLGGTHPQ 96 >UniRef50_Q0G591 Putative uncharacterized protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G591_9RHIZ Length = 125 Score = 48.3 bits (114), Expect = 7e-05, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 42/130 (32%), Gaps = 23/130 (17%) Query: 10 RSKNMRAIATRDTAIEKRLASLLTG---QGLAFRVQDASLPGRPDFVVDEYRCVIFTHGC 66 R R + + T E++L + L + FR Q DF + VI G Sbjct: 8 RRNASRRLRSDSTDWERKLWAHLWRIPLKHGHFRRQAPIGKYIVDFACHTLKLVIEIDGA 67 Query: 67 FWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLT 126 H+ N++RD L G+RV+ ++ + Sbjct: 68 ---QHNQ-----------------DANLQRDAERDRWLSSQGYRVVRFTNDDVKHQINAV 107 Query: 127 DEALTERLEE 136 + + +EE Sbjct: 108 LDTIYAVVEE 117 >UniRef50_Q2NCJ2 Putative uncharacterized protein n=1 Tax=Erythrobacter litoralis HTCC2594 RepID=Q2NCJ2_ERYLH Length = 51 Score = 48.3 bits (114), Expect = 7e-05, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 6/54 (11%) Query: 93 NVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLEEWICGEGASAQ 146 N RD ++ S L GW VL +WEC L + LT RL ++ + + Sbjct: 2 NRLRDEKNRSALISAGWEVLEIWECQLDEPD------LTNRLNSFLFSANEADE 49 >UniRef50_C7M3G0 Leucyl-tRNA synthetase n=5 Tax=Bacteria RepID=C7M3G0_CAPOD Length = 1146 Score = 48.3 bits (114), Expect = 7e-05, Method: Composition-based stats. Identities = 26/145 (17%), Positives = 43/145 (29%), Gaps = 26/145 (17%) Query: 8 ATRSKNMRAIATRDTAIEKRLASLLT--GQGLAFRVQDASLPGRPDFVVDEYRCVIFTHG 65 ++K M T E L L G FR Q DFV R VI G Sbjct: 335 EQKAKEM---RENMTESETVLWEALKSKHIGDKFRRQHIIGNFIADFVCLSKRLVIEVDG 391 Query: 66 CFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKL 125 +H + D L++LG+ V+ + Sbjct: 392 ----GYHTDDTQQ----------------GLDEGRAEELKQLGFEVIRFTNEEVLNNLDK 431 Query: 126 TDEALTERLEEWICGEGASAQIDTQ 150 +TE+L ++ + +++ Sbjct: 432 VIHQITEKL-SFLPNQKELSKVTAS 455 >UniRef50_Q2N7C3 Putative uncharacterized protein n=1 Tax=Erythrobacter litoralis HTCC2594 RepID=Q2N7C3_ERYLH Length = 148 Score = 48.3 bits (114), Expect = 7e-05, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 40/141 (28%), Gaps = 28/141 (19%) Query: 13 NMRAIATRDTAIEKRLASLLTGQ--GLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHH 70 R + T EK L L FR Q P DF+ +R +I G Sbjct: 14 RARKLRRDMTDAEKLLWLKLRKAFPNAKFRRQSPVPPYCADFLSYRHRLIIEADG----- 68 Query: 71 HHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEAL 130 P + E L+E G+ VL W + + + Sbjct: 69 ----GQHDPGSPVE-------------IARTRFLEEQGFTVLRFWNNDILAN----IDGV 107 Query: 131 TERLEEWICGEGASAQIDTQG 151 E + + I G + + Sbjct: 108 LETIRQAIGGSDHAKRSSPSP 128 >UniRef50_Q1VTJ3 Leucyl-tRNA synthetase n=3 Tax=Bacteria RepID=Q1VTJ3_9FLAO Length = 1220 Score = 48.3 bits (114), Expect = 8e-05, Method: Composition-based stats. Identities = 23/144 (15%), Positives = 41/144 (28%), Gaps = 28/144 (19%) Query: 17 IATRDTAIEKRLASLLTGQ---GLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHHC 73 + T EK L L + G FR Q DFV V+ G + H Sbjct: 373 NRNQPTEAEKTLWIQLRAKKLSGYKFRQQHLIGDYITDFVCLSKSLVVEVDGEY-H---- 427 Query: 74 YLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTER 133 + D L + G+ V+ + G + + + Sbjct: 428 -----------------NETKAYDEERTQFLNKKGFEVIRFKNEEVIGNIDEVLDQIKTK 470 Query: 134 LEEWICGE---GASAQIDTQGIHL 154 L++ + S + + + L Sbjct: 471 LDQLPSYDKMAKPSEESKVKPLSL 494 >UniRef50_Q5X7A4 Putative uncharacterized protein n=5 Tax=Legionella pneumophila RepID=Q5X7A4_LEGPA Length = 116 Score = 48.3 bits (114), Expect = 8e-05, Method: Composition-based stats. Identities = 28/136 (20%), Positives = 45/136 (33%), Gaps = 25/136 (18%) Query: 4 VHDKATRSKNMRAIATRDTAIEKRLASLLTG---QGLAFRVQDASLPGRPDFVVDEYRCV 60 V A K +++ R T E L L +G F+ Q DFV + + + Sbjct: 2 VPADAKLLKQAKSLRKRSTDAENCLWYYLRAHRLKGYKFKRQVPIGNYIVDFVCIQRKLI 61 Query: 61 IFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALR 120 + G +L N E D+ + L ++VL W + Sbjct: 62 VELDG------GQHLL----------------NKEYDKDRSAYFSTLSYKVLRFWNDDVL 99 Query: 121 GREKLTDEALTERLEE 136 R E++ LEE Sbjct: 100 LRTGDVLESIVRCLEE 115 >UniRef50_C5CMG5 Putative uncharacterized protein n=1 Tax=Variovorax paradoxus S110 RepID=C5CMG5_VARPS Length = 139 Score = 48.3 bits (114), Expect = 8e-05, Method: Composition-based stats. Identities = 24/138 (17%), Positives = 38/138 (27%), Gaps = 25/138 (18%) Query: 1 MADVHDKATRSKNMRAIATRDTAIEKRLASLLTG--QGLAFRVQDASLPGRPDFVVDEYR 58 M + R N + + T E++L L G+ FR Q DF + Sbjct: 1 MRNQSTPNAR-ANAQVLRREMTDSERKLWGGLRAEQLGVKFRRQHPLGNYIADFACLAPK 59 Query: 59 CVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECA 118 ++ G H D R + + G+ VL Sbjct: 60 LIVELDGS---QHQLQQG-------------------YDARRDAFFRAQGFDVLRFASND 97 Query: 119 LRGREKLTDEALTERLEE 136 +A+ RL E Sbjct: 98 PFTNLDGVRQAIANRLAE 115 >UniRef50_P44075 Uncharacterized protein HI0925 n=23 Tax=Gammaproteobacteria RepID=Y925_HAEIN Length = 121 Score = 47.9 bits (113), Expect = 9e-05, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 37/123 (30%), Gaps = 23/123 (18%) Query: 15 RAIATRDTAIEKRLASLLTG---QGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHH 71 + + T E++L + G F Q L DF + + +I G Sbjct: 13 QKLRADQTDTERKLWQRINRDQLLGFRFNRQKPLLSYIVDFYCAKTKLIIELDG------ 66 Query: 72 HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALT 131 P ++ E+D + L LG+ V+ + + E + Sbjct: 67 --SQHYKP----DY--------QEKDALRDAELNSLGFTVMRFSNDEVMREIEAVVEQIY 112 Query: 132 ERL 134 L Sbjct: 113 LFL 115 >UniRef50_Q2J939 DNA helicase, putative n=3 Tax=Frankia RepID=Q2J939_FRASC Length = 1523 Score = 47.9 bits (113), Expect = 9e-05, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 35/137 (25%), Gaps = 45/137 (32%) Query: 25 EKRLASLLTGQGLAFRVQDASLPGRPDFVV-------------------------DEYRC 59 E+ + L +G R Q R D VV R Sbjct: 1384 ERAVLRELLARGYRVRPQHPVGRYRIDLVVEGVATTRATAEQAVTEGATAGGVGRRGPRL 1443 Query: 60 VIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 + G +H W D R L+ LGW + Sbjct: 1444 AVECDGDRFHGPDQ------------WEA--------DLRRQRILERLGWTFFRIRGSEF 1483 Query: 120 RGREKLTDEALTERLEE 136 + T EAL RL++ Sbjct: 1484 YRHPRPTLEALVRRLDQ 1500 >UniRef50_Q2LRI4 DNA helicase n=2 Tax=Bacteria RepID=Q2LRI4_SYNAS Length = 1606 Score = 47.9 bits (113), Expect = 9e-05, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 54/157 (34%), Gaps = 24/157 (15%) Query: 3 DVHDKATRSKNMRAIATRDTAI-EKRLASLLTGQGLAFRVQDASLPGRPDFVV--DEYRC 59 V D + + + E+ + LT G + Q R D VV R Sbjct: 1358 HVRDPLASLRIFNQEVGKTESPFERDVLKRLTNAGYRVKSQWQVGYYRIDMVVEGAGKRL 1417 Query: 60 VIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECAL 119 I G +H P +EK+ ++ER + L+ LGW+ + + A Sbjct: 1418 AIECDGDRYH---------P-------MEKLSDDMER----QAILERLGWQFIRIRGSAF 1457 Query: 120 RGREKLTDEALTERLEEW-ICGEGASAQIDTQGIHLL 155 L + +RLEE I E + + L+ Sbjct: 1458 YRNPDLAMRPVFDRLEELEIFPEADVGETTASDMTLI 1494 >UniRef50_B8F8Z2 Putative uncharacterized protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8F8Z2_DESAA Length = 116 Score = 47.9 bits (113), Expect = 9e-05, Method: Composition-based stats. Identities = 22/129 (17%), Positives = 42/129 (32%), Gaps = 25/129 (19%) Query: 12 KNMRAIATRDTAIEKRLASLLTGQ---GLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFW 68 + +A+ + T EK+L L + G FR Q + DFV E R ++ G Sbjct: 10 ERAKALRSNMTEAEKKLWQRLRKRQVQGCKFRRQFSIGAYIVDFVCLEKRLIVELDG--- 66 Query: 69 HHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDE 128 + + D + L+ + +L W + + Sbjct: 67 ---GQHKQQ----------------ASYDSVRTAWLEANNFCILRFWNNQVMQNTDEVVQ 107 Query: 129 ALTERLEEW 137 A+ +L + Sbjct: 108 AIFNKLSQA 116 >UniRef50_B8HN08 Putative uncharacterized protein n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HN08_CYAP4 Length = 1722 Score = 47.9 bits (113), Expect = 1e-04, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 35/121 (28%), Gaps = 25/121 (20%) Query: 21 DTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVD------EYRCVIFTHGCFWHHHHCY 74 D+ E +A L +G Q D V Y I G +H Sbjct: 1617 DSDFEVFVAERLRQRGYQVVPQVGVSGYFIDLAVVDPQRSGTYLLGIECDGATYH----- 1671 Query: 75 LFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERL 134 K + +RDR L+ LGW++ +W E L + Sbjct: 1672 ------------SSKSAR--DRDRLRQQVLERLGWKLYRIWSTDWFMNTNAEFEKLIRHI 1717 Query: 135 E 135 + Sbjct: 1718 Q 1718 >UniRef50_A5V3D5 Putative uncharacterized protein n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V3D5_SPHWW Length = 132 Score = 47.9 bits (113), Expect = 1e-04, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 35/122 (28%), Gaps = 25/122 (20%) Query: 12 KNMRAIATRDTAIEKRLASLLTG---QGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFW 68 + R + T E++L L G G F Q DF+ VI G Sbjct: 12 RLARRLRNNATNTERKLWHHLRGSRLNGFKFSRQMPVAGFICDFLCRSAHLVIELDGG-- 69 Query: 69 HHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDE 128 H + D R++ G+RVL W + R + Sbjct: 70 -QHGWQAAE-------------------DEARTRRIEAEGYRVLRFWNNDVNERLEGVLA 109 Query: 129 AL 130 + Sbjct: 110 RI 111 >UniRef50_A5G528 Putative uncharacterized protein n=3 Tax=Geobacter RepID=A5G528_GEOUR Length = 147 Score = 47.9 bits (113), Expect = 1e-04, Method: Composition-based stats. Identities = 25/125 (20%), Positives = 37/125 (29%), Gaps = 23/125 (18%) Query: 15 RAIATRDTAIEKRLASLLTG---QGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHH 71 R + T E+RL S L G G+ F Q P DF V+ G Sbjct: 37 RELRKNMTEAEQRLWSHLRGKQLLGVQFYRQKPIGPYIVDFFAPGAGLVVEADG------ 90 Query: 72 HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALT 131 + P +N RD L RVL + + + Sbjct: 91 --SQHREP------------ENARRDEERDRFLVGEELRVLRFDNYQILRDTDAVIQRII 136 Query: 132 ERLEE 136 + ++E Sbjct: 137 DAIQE 141 >UniRef50_A6AG73 DNA methyltransferase n=4 Tax=Vibrio cholerae RepID=A6AG73_VIBCH Length = 126 Score = 47.9 bits (113), Expect = 1e-04, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 40/137 (29%), Gaps = 23/137 (16%) Query: 6 DKATRSKNMRA-IATRDTAIEKRLASLLTG--QGLAFRVQDASLPGRPDFVVDEYRCVIF 62 RSK R + T E+RL L G+ FR Q DF Y+ + Sbjct: 3 SNPQRSKVFRQYLRNHMTHPEQRLWQHLRHFQLGVKFRRQFGVGTYVLDFYCSTYKLAVE 62 Query: 63 THGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGR 122 H K+ D + + L+ G RV+ + + Sbjct: 63 IDDD---SHFSEGGKI-----------------HDEQRTAYLKRHGIRVVRYTNQEVEQQ 102 Query: 123 EKLTDEALTERLEEWIC 139 E + L+ I Sbjct: 103 LTDVIEDIFRHLQACIR 119 >UniRef50_B8IMU8 Putative uncharacterized protein n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IMU8_METNO Length = 137 Score = 47.9 bits (113), Expect = 1e-04, Method: Composition-based stats. Identities = 20/128 (15%), Positives = 40/128 (31%), Gaps = 25/128 (19%) Query: 11 SKNMRAIATRDTAIEKRLASLLTGQ---GLAFRVQDASLPGRPDFVVDEYRCVIFTHGCF 67 + R++ + T+ E L L G+ G+ FR Q L DF+ E + ++ G Sbjct: 6 RRFARSLRQQATSAEDVLWRALRGRRLHGVKFRRQAPFLLYTVDFLCFERKLIVELDG-- 63 Query: 68 WHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTD 127 H + D R ++ G+ ++ + Sbjct: 64 -RQHDWHDV-------------------YDARRTKEIERSGFALIRFRNDEVLSDLDAAL 103 Query: 128 EALTERLE 135 ++ L Sbjct: 104 NRISAALH 111 >UniRef50_C9Z2D0 Putative uncharacterized protein n=1 Tax=Streptomyces scabiei 87.22 RepID=C9Z2D0_STRSW Length = 1845 Score = 47.9 bits (113), Expect = 1e-04, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 31/92 (33%), Gaps = 22/92 (23%) Query: 25 EKRLASLLTGQGLAFRVQDASLPGRPDFVVDE--YRCVIFTHGCFWHHHHCYLFKVPATR 82 E+R+ L +G R Q + R D VV+ R + G +H Sbjct: 1380 EQRVYLALRARGHQVRPQYPAGRYRIDLVVEGGTRRLAVECDGDAFH------------- 1426 Query: 83 TEFWLEKIGKNVERDRRDISRLQELGWRVLIV 114 +N + D L+ +GW + + Sbjct: 1427 -------TEENADADAARQRELERVGWTFVRI 1451 >UniRef50_D1CIG6 Putative uncharacterized protein n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CIG6_THET1 Length = 1712 Score = 47.9 bits (113), Expect = 1e-04, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 45/157 (28%), Gaps = 34/157 (21%) Query: 4 VHDKATRSKNMRAIATRDTAIEKR--LASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVI 61 V R + ++ E + L G FR Q P +F E R I Sbjct: 1178 VPTPRAREFRRASTRSK----ELLWHVLRGLQVDGYRFRRQHPFGPFILEFYCPEARLAI 1233 Query: 62 FTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVW----EC 117 G +P R E L+ G +V+ V E Sbjct: 1234 EVDG-----------PIPGERREV-----------ALERQRWLERHGLQVIRVSPEEVEH 1271 Query: 118 ALRGREKLTDEALTERLEEW--ICGEGASAQIDTQGI 152 +L + L++RL + + G ++ I Sbjct: 1272 SLPTVVRKIRAKLSQRLSQAAPLPGRSEDGHTPSRPI 1308 >UniRef50_Q2NFT6 Predicted helicase n=1 Tax=Methanosphaera stadtmanae DSM 3091 RepID=Q2NFT6_METST Length = 1513 Score = 47.9 bits (113), Expect = 1e-04, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 37/124 (29%), Gaps = 25/124 (20%) Query: 25 EKRLASLLTGQGLAFRVQDASLPGRPD--FVVDE----YRCVIFTHGCFWHHHHCYLFKV 78 E+ + + LT +G Q R D V + Y I G +H Sbjct: 1158 EESVYNFLTDEGYIVSKQVGCAGYRIDLAIVNPKDSNNYVLGIECDGASYHSS------- 1210 Query: 79 PATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLEEWI 138 +RDR + L+ LGW+ +W L E +++ + Sbjct: 1211 ------------ASARDRDRLRQNMLEGLGWKFHRIWSTDWYYNRINAKNTLLEAIDKAL 1258 Query: 139 CGEG 142 Sbjct: 1259 IDVE 1262 >UniRef50_UPI0001C419B2 DNA helicase n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C419B2 Length = 2632 Score = 47.2 bits (111), Expect = 2e-04, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 34/116 (29%), Gaps = 25/116 (21%) Query: 25 EKRLASLLTGQGLAFRVQDASLPGRPDFVV------DEYRCVIFTHGCFWHHHHCYLFKV 78 E + + L G + R D + +Y I G H Sbjct: 1251 EDAIYNFLADNGYRVDKRIGCAGFRVDLAIIDEENPGKYLLGIQCDG---H--------- 1298 Query: 79 PATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERL 134 + K+ + +RDR L LGW++ +W L L E + Sbjct: 1299 -----NYASSKVAR--DRDRLREQVLNGLGWKIYHIWSTDWYRNRDLARARLLEHI 1347 >UniRef50_Q3STA0 Putative uncharacterized protein n=4 Tax=Proteobacteria RepID=Q3STA0_NITWN Length = 159 Score = 47.2 bits (111), Expect = 2e-04, Method: Composition-based stats. Identities = 26/145 (17%), Positives = 45/145 (31%), Gaps = 30/145 (20%) Query: 10 RSKNMRAIATRDTAIEKRLASLL---TGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGC 66 R R++ T E++L L QGL FR Q + P DF+ + R V+ G Sbjct: 29 RKATARSLRAWMTDAERKLWFGLKDRRFQGLKFRRQVSVGPYIADFLCFDRRLVVEVDG- 87 Query: 67 FWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLT 126 + + RD + G+R L W Sbjct: 88 -----GQHAESL-----------------RDADRDRWFADNGFRTLRFW----NNDVLSN 121 Query: 127 DEALTERLEEWICGEGASAQIDTQG 151 E + + E ++++ + Sbjct: 122 LEGVLTVISEGAATPHPASRLRSPP 146 >UniRef50_A5L0L4 Putative uncharacterized protein n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5L0L4_9GAMM Length = 121 Score = 47.2 bits (111), Expect = 2e-04, Method: Composition-based stats. Identities = 20/135 (14%), Positives = 42/135 (31%), Gaps = 22/135 (16%) Query: 4 VHDKATRSKNMRAIATRDTAIEKRLASLLTG--QGLAFRVQDASLPGRPDFVVDEYRCVI 61 ++ + + +A+ E++L + G+ FR Q + DF E + I Sbjct: 3 IYTQPQLNTFRKALRNNMPQPERKLWFYIRRKQLGVKFRRQHSIEKYIVDFFCCELKLAI 62 Query: 62 FTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRG 121 G + F + D + L +LG RVL + Sbjct: 63 ELDG----------------NSHF----SEQAQAYDHQRTQDLNKLGIRVLRFTNNEVNH 102 Query: 122 REKLTDEALTERLEE 136 + + + + + Sbjct: 103 NVEEVLAKIMDSIPK 117 >UniRef50_C7LKU4 Putative uncharacterized protein n=2 Tax=Mycoplasma mycoides RepID=C7LKU4_MYCML Length = 888 Score = 47.2 bits (111), Expect = 2e-04, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 39/120 (32%), Gaps = 25/120 (20%) Query: 25 EKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYR------CVIFTHGCFWHHHHCYLFKV 78 E+ + L +G + Q S + D V + R I G Sbjct: 573 EQEVYEQLVLKGWKVKKQVGSSEFKIDLAVVDPRNQNKFLLAIECDG------------- 619 Query: 79 PATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLEEWI 138 + F L K + +RDR L+ GW +W L + + E+L + + Sbjct: 620 ----SAFNLAKSTR--DRDRLYQQVLESRGWAFHRIWSTDWFKNPSLQIDLIEEKLNKLL 673 >UniRef50_B0SW39 Putative uncharacterized protein n=2 Tax=Caulobacter RepID=B0SW39_CAUSK Length = 143 Score = 46.8 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 20/132 (15%), Positives = 33/132 (25%), Gaps = 25/132 (18%) Query: 6 DKATRSKNMRAIATRDTAIEKRLASLLTGQ---GLAFRVQDASLPGRPDFVVDEYRCVIF 62 + + + E L L + G R Q P DF + R VI Sbjct: 3 SPTKTHSRAKTLRRTMSPPEVMLWVRLRARQPDGPRIRRQHPIGPYIADFYCADARLVIE 62 Query: 63 THGCFWHHHHCY-LFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRG 121 G C+ + P E D R + + V+ + Sbjct: 63 VDG------ACHTVGHAP---------------EHDARRDAYMLSKDLSVMRYAAAEVLA 101 Query: 122 REKLTDEALTER 133 A+ + Sbjct: 102 NPDNVATAIWDL 113 >UniRef50_Q5P0E9 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P0E9_AZOSE Length = 1604 Score = 46.8 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 34/118 (28%), Gaps = 25/118 (21%) Query: 18 ATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVD------EYRCVIFTHGCFWHHH 71 T D+ E + S L +G Q + D V Y I G +H Sbjct: 1283 RTPDSPFELEVMSALQARGYRIEPQVGTAGYFIDMAVKDPELPGRYVLAIECDGAAYH-- 1340 Query: 72 HCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEA 129 ++R+ +RDR L+ LGW +W + Sbjct: 1341 --------SSRSA---------RDRDRLRQGVLEGLGWIFHRIWSTDWFRDPGRELDR 1381 >UniRef50_D1JEW5 Putative type I restriction enzyme HindVIIP R protein, N-terminal part n=1 Tax=uncultured archaeon RepID=D1JEW5_9ARCH Length = 634 Score = 46.8 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 38/126 (30%), Gaps = 23/126 (18%) Query: 12 KNMRAIATRDTAIEKRLASLLTG---QGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFW 68 K +R + + TA E L+ GL FR Q DF R +I G Sbjct: 287 KRVRDLRKKQTAAENVFWELVRNKKLLGLKFRRQHQIGHYIVDFYCHSERLIIELDGEV- 345 Query: 69 HHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDE 128 H+ K D L+ LG ++L L + + Sbjct: 346 HNTPEQKKK-------------------DGIRDKYLRSLGNKILRFNNAELFENTENVLK 386 Query: 129 ALTERL 134 + + L Sbjct: 387 VIEKSL 392 >UniRef50_Q0G7M8 Putative uncharacterized protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G7M8_9RHIZ Length = 134 Score = 46.8 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 25/142 (17%), Positives = 40/142 (28%), Gaps = 23/142 (16%) Query: 5 HDKATRSKNMRAIATRDTAIEKRLASLLTGQ---GLAFRVQDASLPGRPDFVVDEYRCVI 61 + R R + T E+ L + L FR Q L DFV E R ++ Sbjct: 7 IEPEHRGY-ARRMRKMPTDAERMLWHRIRAGRLPNLRFRRQVPMLGYIADFVCHEARLIV 65 Query: 62 FTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRG 121 G W H + N DR+ + + G+ L + + Sbjct: 66 ELDG--WQHTG-----------------LSANAALDRKRDAAFVKAGYLTLRIENDDVIE 106 Query: 122 REKLTDEALTERLEEWICGEGA 143 + + E I Sbjct: 107 DVDAVAKIIAAIARERIAQGAP 128 >UniRef50_D0SAS8 Putative uncharacterized protein n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SAS8_ACIJO Length = 133 Score = 46.8 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 27/100 (27%), Gaps = 23/100 (23%) Query: 18 ATRDTAIEKRLASLLTG---QGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHHCY 74 T E+ L L GL F Q L DF VI G + Sbjct: 23 RNNMTDAEQLLWQRLRRKQILGLQFYRQKPILNFIVDFYCPSANLVIECDG------GQH 76 Query: 75 LFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIV 114 + +E DR L +LG VL Sbjct: 77 YT--------------AEGLEADRARDQALAQLGLNVLRF 102 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.313 0.154 0.551 Lambda K H 0.267 0.0472 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,131,299,904 Number of Sequences: 3077464 Number of extensions: 55940508 Number of successful extensions: 163624 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 455 Number of HSP's successfully gapped in prelim test: 275 Number of HSP's that attempted gapping in prelim test: 162477 Number of HSP's gapped (non-prelim): 777 length of query: 156 length of database: 1,040,396,356 effective HSP length: 117 effective length of query: 39 effective length of database: 680,333,068 effective search space: 26532989652 effective search space used: 26532989652 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (20.8 bits) S2: 88 (38.3 bits)