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| Job Description | P76055 | | Confidence | 48.26% | Date | Thu Jan 5 12:17:55 GMT 2012 |
| Rank | 121 | Aligned Residues | 94 |
| % Identity | 12% | Template | c1j8yF_ |
| PDB info |
PDB header:signaling protein | Chain: F: PDB Molecule:signal recognition 54 kda protein; |
PDBTitle: signal recognition particle conserved gtpase domain from a.2 ambivalens t112a mutant
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| Resolution | 2.00 Å |
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| Predicted Secondary structure |   |
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| Query Sequence |   |
N | Q | Q | I | T | K | K | E | Q | Y | N | L | N | K | L | Q | K | R | L | R | R | N | V | G | E | A | I | . |
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A | D | F | N | M | I | E | E | G | D | R | I | M | V | C | L | S | G | G | K | D | S | Y | T | M | L | E | I | L | R | N | L | Q | Q | S | A | P | I | N | F | S | L | V | A | V | N |
| Query Conservation |   |
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| Template Conservation |   |
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| Template Sequence |   |
K | E | R | L | K | N | E | K | P | P | T | Y | I | E | R | R | E | W | F | I | K | I | V | Y | D | E | L | S | N | L | F | G | G | D | K | E | P | K | V | I | P | D | K | I | P | Y | V | I | M | L | V | G | V | Q | G | . |
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G | F | K | V | G | L | V | G |
| Template Known Secondary structure |   |
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| Template Predicted Secondary structure |   |
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54 | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | |
. | 110 | . | . | . | . | . | . | . | . | . | 120 | . | |
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77 | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . |
| Predicted Secondary structure |   |
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| Query Sequence |   |
L | D | Q | K | Q | P | G | F | P | E | H | V | L | P | E | Y | L | E | K | L | G | V | E | Y | K | I |
| Query Conservation |   |
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| Alig confidence |   |
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| Template Conservation |   |
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| Template Sequence |   |
A | D | V | Y | . |
R | P | A | A | L | E | Q | L | Q | Q | L | G | Q | Q | I | G | V | P | V | Y | G |
| Template Known Secondary structure |   |
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| S | . | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
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| Template Predicted Secondary structure |   |
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| Template SS confidence |   |
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134 | . | . | . | |
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No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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