BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (330 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_C9Y333 D-xylose-binding periplasmic protein n=20 Tax=Pr... 596 e-169 UniRef50_P45047 D-xylose-binding periplasmic protein n=193 Tax=B... 509 e-143 UniRef50_Q2RGX1 Periplasmic binding protein/LacI transcriptional... 426 e-118 UniRef50_Q2NWM4 Putative xylose ABC transporter periplasmic comp... 365 e-100 UniRef50_C6J071 ABC-type ribose transport system n=7 Tax=Bacteri... 347 4e-94 UniRef50_B5JEL4 Putative uncharacterized protein n=1 Tax=Verruco... 313 6e-84 UniRef50_A6TRZ6 Monosaccharide-transporting ATPase n=1 Tax=Alkal... 295 1e-78 UniRef50_B0K235 Monosaccharide-transporting ATPase n=9 Tax=Clost... 283 5e-75 UniRef50_B8I3W5 Periplasmic sugar-binding protein n=2 Tax=Clostr... 259 7e-68 UniRef50_B9MLQ1 Monosaccharide-transporting ATPase n=1 Tax=Anaer... 257 3e-67 UniRef50_A4XMF2 Monosaccharide-transporting ATPase n=1 Tax=Caldi... 237 5e-61 UniRef50_Q11DN9 D-xylose ABC transporter, periplasmic substrate-... 231 3e-59 UniRef50_A9KQP5 Periplasmic binding protein/LacI transcriptional... 228 2e-58 UniRef50_C8WRB6 Xylose binding protein transport system n=2 Tax=... 228 3e-58 UniRef50_A5FZZ2 Monosaccharide-transporting ATPase n=1 Tax=Acidi... 209 1e-52 UniRef50_P25548 Multiple sugar-binding periplasmic receptor chvE... 201 2e-50 UniRef50_D0LRU4 D-xylose transporter subunit XylF n=1 Tax=Halian... 200 6e-50 UniRef50_D2Q8V2 ABC transporter (Substrate-binding protein) n=2 ... 199 1e-49 UniRef50_C2AIY5 Monosaccharide ABC transporter substrate-binding... 198 2e-49 UniRef50_B1G9I5 Monosaccharide-transporting ATPase n=2 Tax=Burkh... 194 5e-48 UniRef50_UPI0001C31C00 xylose binding protein transport system n... 192 1e-47 UniRef50_D1C9K0 ABC-type xylose transport system periplasmic com... 192 1e-47 UniRef50_A0QT42 ABC transporter n=2 Tax=Actinomycetales RepID=A0... 191 4e-47 UniRef50_A4AIX2 Solute-binding protein n=1 Tax=marine actinobact... 187 3e-46 UniRef50_C5ESX5 Multiple sugar-binding periplasmic receptor chvE... 182 2e-44 UniRef50_B1VWK1 Putative ABC transporter solute-binding protein ... 179 1e-43 UniRef50_C1RNE3 Monosaccharide ABC transporter substrate-binding... 177 3e-43 UniRef50_A9KQP6 Putative solute-binding component of ABC transpo... 174 3e-42 UniRef50_C5RJ04 D-xylose ABC transporter, periplasmic substrate-... 174 5e-42 UniRef50_Q47NL4 Solute-binding protein n=26 Tax=Actinomycetales ... 172 2e-41 UniRef50_D1PSG1 Sugar ABC transporter, periplasmic sugar-binding... 171 3e-41 UniRef50_D2B5R3 Putative sugar ABC transporter, substrate-bindin... 170 7e-41 UniRef50_C7M0I9 Solute-binding protein n=1 Tax=Acidimicrobium fe... 170 8e-41 UniRef50_A5ZMP8 Putative uncharacterized protein n=1 Tax=Ruminoc... 169 2e-40 UniRef50_A6WFF0 Solute-binding protein n=1 Tax=Kineococcus radio... 169 2e-40 UniRef50_D2Q1K0 Xylose ABC transporter, substrate-binding protei... 169 2e-40 UniRef50_A9B1C5 Solute-binding protein n=1 Tax=Herpetosiphon aur... 168 3e-40 UniRef50_C7MA39 Monosaccharide-binding protein n=1 Tax=Brachybac... 166 8e-40 UniRef50_B0PDL3 Putative uncharacterized protein n=1 Tax=Anaerot... 166 9e-40 UniRef50_C7Q046 Solute-binding protein n=4 Tax=Actinomycetales R... 166 1e-39 UniRef50_C6PMK5 ABC transporter (Substrate-binding protein) n=6 ... 165 2e-39 UniRef50_UPI0001BC53E3 D-xylose ABC transporter, periplasmic sub... 161 2e-38 UniRef50_B5J4J1 Putative uncharacterized protein n=1 Tax=Octadec... 161 3e-38 UniRef50_C7MZ66 Monosaccharide-binding protein n=1 Tax=Saccharom... 161 3e-38 UniRef50_A8L0L2 Solute-binding protein n=5 Tax=Bacteria RepID=A8... 161 4e-38 UniRef50_A6X2R7 Periplasmic binding protein/LacI transcriptional... 160 5e-38 UniRef50_B8HEQ4 Multiple sugar-binding periplasmic receptor n=8 ... 160 9e-38 UniRef50_UPI00018512F8 xylose binding protein transport system n... 159 1e-37 UniRef50_D1BVH2 Xylose ABC transporter, substrate-binding protei... 153 1e-35 UniRef50_C3X7Z9 D-xylose ABC transporter n=1 Tax=Oxalobacter for... 152 2e-35 UniRef50_D1BCK3 Multiple monosaccharide-binding protein n=1 Tax=... 151 3e-35 UniRef50_C7QF49 Solute-binding protein n=1 Tax=Catenulispora aci... 150 5e-35 UniRef50_A0LTZ4 Solute-binding protein n=17 Tax=Actinomycetales ... 150 7e-35 UniRef50_C0CY30 Putative uncharacterized protein n=1 Tax=Clostri... 147 4e-34 UniRef50_B3DR21 ABC-type xylose transport system periplasmic com... 146 9e-34 UniRef50_A9WDY0 Periplasmic sugar-binding protein n=15 Tax=Bacte... 143 6e-33 UniRef50_C6WNS7 Monosaccharide-transporting ATPase n=1 Tax=Actin... 142 1e-32 UniRef50_C9Z5F4 Putative lipoprotein n=2 Tax=Streptomyces RepID=... 141 3e-32 UniRef50_C1RM32 Monosaccharide ABC transporter substrate-binding... 136 1e-30 UniRef50_B9JL62 Sugar ABC transporter n=7 Tax=Bacteria RepID=B9J... 134 4e-30 UniRef50_B1Y1T3 ABC sugar transporter, periplasmic solute-bindin... 126 1e-27 UniRef50_Q0SK74 ABC sugar transporter, periplasmic solute-bindin... 124 4e-27 UniRef50_UPI00005103C7 solute-binding protein n=1 Tax=Brevibacte... 122 2e-26 UniRef50_C0C295 Putative uncharacterized protein n=1 Tax=Clostri... 117 7e-25 UniRef50_B5K0N1 ABC sugar transporter, periplasmic solute-bindin... 110 7e-23 UniRef50_P0C0J7 46 kDa surface antigen n=6 Tax=Mycoplasma hyopne... 101 3e-20 UniRef50_A1B0U9 Periplasmic binding protein/LacI transcriptional... 98 4e-19 UniRef50_B8I2K0 Periplasmic binding protein/LacI transcriptional... 91 4e-17 UniRef50_Q883G4 Ribose ABC transporter, periplasmic ribose-bindi... 91 6e-17 UniRef50_C2KYA7 Possible periplasmic binding protein/LacI transc... 90 1e-16 UniRef50_A5CYL7 ABC-type sugar transport system, periplasmic com... 89 2e-16 UniRef50_C5EHH7 Periplasmic binding protein/LacI transcriptional... 88 5e-16 UniRef50_D1AGX3 Periplasmic binding protein/LacI transcriptional... 87 6e-16 UniRef50_C6JG14 Monosaccharide-transporting ATPase n=1 Tax=Rumin... 87 6e-16 UniRef50_C1D8A9 RbsB n=14 Tax=Bacteria RepID=C1D8A9_LARHH 87 7e-16 UniRef50_C8VY22 Periplasmic binding protein/LacI transcriptional... 87 1e-15 UniRef50_Q65S41 RbsB protein n=8 Tax=Pasteurellaceae RepID=Q65S4... 87 1e-15 UniRef50_A1WJM2 Periplasmic binding protein/LacI transcriptional... 86 1e-15 UniRef50_Q65E53 RbsB n=6 Tax=Firmicutes RepID=Q65E53_BACLD 86 2e-15 UniRef50_C1XWA5 Monosaccharide ABC transporter substrate-binding... 86 2e-15 UniRef50_C0CNG0 Putative uncharacterized protein n=1 Tax=Blautia... 86 3e-15 UniRef50_A5ZV14 Putative uncharacterized protein n=1 Tax=Ruminoc... 85 4e-15 UniRef50_C5VU40 D-ribose-binding protein n=4 Tax=Bacteria RepID=... 84 5e-15 UniRef50_C1YJZ3 Monosaccharide ABC transporter substrate-binding... 82 2e-14 UniRef50_A0JVZ4 Periplasmic binding protein/LacI transcriptional... 82 2e-14 UniRef50_C4U114 Ribose-binding protein of ribose ABC transporter... 82 2e-14 UniRef50_B0URJ4 Monosaccharide-transporting ATPase n=6 Tax=Paste... 81 6e-14 UniRef50_C9TJ16 Sugar ABC transporter n=2 Tax=Brucella pinnipedi... 80 1e-13 UniRef50_UPI0001B4C057 putative D-ribose-binding protein compone... 79 2e-13 UniRef50_A1SYD2 Bifunctional carbohydrate binding and transport ... 79 2e-13 UniRef50_B0NBQ1 Putative uncharacterized protein n=1 Tax=Clostri... 79 2e-13 UniRef50_Q98LI2 Periplasmic ribose-binding protein n=2 Tax=Prote... 78 5e-13 UniRef50_Q0RYT8 ABC sugar transporter, periplasmic substrate bin... 77 6e-13 UniRef50_Q97JD5 Periplasmic sugar-binding protein n=1 Tax=Clostr... 77 8e-13 UniRef50_Q1R0N3 Periplasmic binding protein/LacI transcriptional... 77 8e-13 UniRef50_A6W806 Periplasmic binding protein/LacI transcriptional... 77 1e-12 UniRef50_A8F472 Periplasmic binding protein/LacI transcriptional... 77 1e-12 UniRef50_A8GD77 Periplasmic binding protein/LacI transcriptional... 77 1e-12 UniRef50_A6UE72 Monosaccharide-transporting ATPase n=13 Tax=Alph... 76 1e-12 UniRef50_Q03CA2 ABC-type sugar transport system, periplasmic com... 76 2e-12 UniRef50_B1KZY7 D-ribose-binding protein n=3 Tax=Clostridium bot... 75 2e-12 UniRef50_C5VEK6 D-ribose-binding periplasmic protein n=3 Tax=Cor... 75 3e-12 UniRef50_A9HN30 Periplasmic binding protein/LacI transcriptional... 75 3e-12 UniRef50_Q98J19 Ribose-binding protein of ribose ABC transporter... 75 3e-12 UniRef50_C6QL47 Periplasmic binding protein/LacI transcriptional... 75 3e-12 UniRef50_Q9KAG4 Sugar ABC transporter (Sugar-binding protein) n=... 75 4e-12 UniRef50_C7G6J4 Putative galactose ABC transporter, periplasmic ... 75 4e-12 UniRef50_P36949 D-ribose-binding protein n=274 Tax=Bacteria RepI... 75 4e-12 UniRef50_A6VWF2 Periplasmic binding protein/LacI transcriptional... 74 5e-12 UniRef50_C0C5R0 Putative uncharacterized protein n=1 Tax=Clostri... 74 8e-12 UniRef50_D2PNL9 Periplasmic binding protein/LacI transcriptional... 74 8e-12 UniRef50_C5EU51 D-galactose-binding periplasmic protein n=4 Tax=... 74 1e-11 UniRef50_A8S312 Putative uncharacterized protein n=1 Tax=Clostri... 73 1e-11 UniRef50_A1WJI7 Periplasmic binding protein/LacI transcriptional... 73 2e-11 UniRef50_A1R5X6 D-ribose-binding protein n=1 Tax=Arthrobacter au... 73 2e-11 UniRef50_Q2SMT1 ABC-type sugar transport system, periplasmic com... 72 2e-11 UniRef50_C9LWW5 Sugar ABC transporter, periplasmic sugar-binding... 72 3e-11 UniRef50_B0PGZ6 Putative uncharacterized protein n=1 Tax=Anaerot... 72 3e-11 UniRef50_B3T6P5 Putative periplasmic binding protein and sugar b... 71 4e-11 UniRef50_Q9K631 Rhizopine ABC transporter (Rhizopine-binding pro... 71 6e-11 UniRef50_C8Q2Z4 Sugar ABC transporter, periplasmic sugar-binding... 71 6e-11 UniRef50_C5VG88 Sensor protein n=2 Tax=Prevotella RepID=C5VG88_9... 71 6e-11 UniRef50_A8RW63 Putative uncharacterized protein n=1 Tax=Clostri... 71 7e-11 UniRef50_C6CIQ9 Periplasmic binding protein/LacI transcriptional... 70 9e-11 UniRef50_C3MI72 Putative ribose ABC transporter, ribose-binding ... 70 1e-10 UniRef50_C6AR66 Periplasmic binding protein/LacI transcriptional... 70 1e-10 UniRef50_Q7MEU9 ABC-type sugar transport system, periplasmic com... 70 1e-10 UniRef50_A6E6Q9 Sensor protein n=1 Tax=Pedobacter sp. BAL39 RepI... 70 1e-10 UniRef50_B9JQE2 D-ribose-binding periplasmic protein n=1 Tax=Agr... 70 1e-10 UniRef50_A4F8A2 Binding protein/LacI transcriptional regulator n... 70 1e-10 UniRef50_A8SGU5 Putative uncharacterized protein n=1 Tax=Faecali... 69 2e-10 UniRef50_A5F1B8 Ribose ABC transporter, periplasmic D-ribose-bin... 69 2e-10 UniRef50_B9DT58 Putative extracellular sugar-binding protein n=1... 69 2e-10 UniRef50_B9JQF4 Sugar-binding transcriptional regulator, LacI fa... 69 2e-10 UniRef50_A5ZT83 Putative uncharacterized protein n=1 Tax=Ruminoc... 69 2e-10 UniRef50_C7QJZ0 Periplasmic binding protein/LacI transcriptional... 68 4e-10 UniRef50_C2KUT6 Galactoside ABC superfamily ATP binding cassette... 68 4e-10 UniRef50_C8WRM5 Periplasmic binding protein/LacI transcriptional... 68 4e-10 UniRef50_C0C0J1 Putative uncharacterized protein n=1 Tax=Clostri... 68 5e-10 UniRef50_A5KKL8 Putative uncharacterized protein n=1 Tax=Ruminoc... 68 5e-10 UniRef50_B0PGH9 Putative uncharacterized protein n=1 Tax=Anaerot... 68 5e-10 UniRef50_Q2YI92 Putative two-component system sensor histidine k... 68 6e-10 UniRef50_D1ANT2 Periplasmic binding protein/LacI transcriptional... 67 6e-10 UniRef50_Q3MB45 Periplasmic binding protein/LacI transcriptional... 67 6e-10 UniRef50_C7REM6 Periplasmic binding protein/LacI transcriptional... 67 8e-10 UniRef50_A9CF36 ABC transporter, substrate binding protein (Suga... 67 8e-10 UniRef50_A5G0N2 Periplasmic binding protein/LacI transcriptional... 67 9e-10 UniRef50_A1WGA7 Periplasmic binding protein/LacI transcriptional... 67 9e-10 UniRef50_C7IGF5 ABC-type sugar transport system periplasmic comp... 67 1e-09 UniRef50_Q0SSJ2 Ribose ABC transporter, ribose-binding protein n... 67 1e-09 UniRef50_B5GKD2 D-ribose ABC transporter permease protein n=1 Ta... 67 1e-09 UniRef50_UPI00019735E2 sugar-binding transcriptional regulator, ... 67 1e-09 UniRef50_C4FY38 Putative uncharacterized protein n=1 Tax=Catonel... 66 1e-09 UniRef50_A6UHJ3 Periplasmic binding protein/LacI transcriptional... 66 1e-09 UniRef50_C0CSY8 Putative uncharacterized protein n=1 Tax=Clostri... 66 2e-09 UniRef50_D2S5J9 Periplasmic binding protein/LacI transcriptional... 66 2e-09 UniRef50_A0LA89 Periplasmic binding protein/LacI transcriptional... 66 2e-09 UniRef50_C3QNV9 Sensor protein n=5 Tax=Bacteroides RepID=C3QNV9_... 66 2e-09 UniRef50_B0PES6 Putative uncharacterized protein n=1 Tax=Anaerot... 65 3e-09 UniRef50_B2IJW8 Periplasmic binding protein/LacI transcriptional... 65 3e-09 UniRef50_C0C2X7 Putative uncharacterized protein n=1 Tax=Clostri... 65 3e-09 UniRef50_D1AQM7 Periplasmic binding protein/LacI transcriptional... 65 3e-09 UniRef50_B0NEL2 Putative uncharacterized protein n=1 Tax=Clostri... 65 3e-09 UniRef50_A5ZT86 Putative uncharacterized protein n=1 Tax=Ruminoc... 65 3e-09 UniRef50_A4TI53 Sugar ABC transporter periplasmic binding protei... 65 4e-09 UniRef50_B2J7A7 Periplasmic binding protein/LacI transcriptional... 64 5e-09 UniRef50_B9KPX1 Periplasmic binding protein/LacI transcriptional... 64 5e-09 UniRef50_C5V3A4 Periplasmic binding protein/LacI transcriptional... 64 5e-09 UniRef50_A8RKK5 Putative uncharacterized protein n=1 Tax=Clostri... 64 6e-09 UniRef50_B8H8H8 Periplasmic binding protein/LacI transcriptional... 64 6e-09 UniRef50_B8H228 Inositol ABC transporter, periplasmic inositol-b... 64 7e-09 UniRef50_C6B4I0 Periplasmic binding protein/LacI transcriptional... 64 7e-09 UniRef50_D1PGW4 Sensor protein n=1 Tax=Prevotella copri DSM 1820... 64 9e-09 UniRef50_A0R773 Sugar ABC transporter substrate-binding protein ... 64 1e-08 UniRef50_A9FWH4 LACI-type transcriptional regulator n=1 Tax=Sora... 64 1e-08 UniRef50_C0B7M6 Putative uncharacterized protein n=1 Tax=Coproco... 63 1e-08 UniRef50_Q930Q0 ABC transporter, periplasmic solute-binding prot... 63 1e-08 UniRef50_A6LHB1 Sensor protein n=4 Tax=Bacteroidales RepID=A6LHB... 63 1e-08 UniRef50_C0RMD7 Rhizopine-binding protein n=23 Tax=Brucella RepI... 63 1e-08 UniRef50_P49308 Putative rhizopine-binding protein n=37 Tax=Prot... 63 2e-08 UniRef50_C0D949 Putative uncharacterized protein n=1 Tax=Clostri... 63 2e-08 UniRef50_A8GD74 Periplasmic binding protein/LacI transcriptional... 63 2e-08 UniRef50_Q7UNV9 Bifunctional carbohydrate binding and transport ... 63 2e-08 UniRef50_Q2KAX1 Probable sugar ABC transporter, substrate-bindin... 63 2e-08 UniRef50_A8RZI4 Putative uncharacterized protein n=1 Tax=Clostri... 63 2e-08 UniRef50_B1I0V8 ABC-type sugar transport system periplasmic comp... 62 2e-08 UniRef50_D2QME7 Two component transcriptional regulator, AraC fa... 62 2e-08 UniRef50_UPI0001C31E06 ribose ABC transporter, substrate binding... 62 2e-08 UniRef50_A3CKH1 Periplasmic sugar-binding protein (Ribose porter... 62 2e-08 UniRef50_A5FXE6 Periplasmic binding protein/LacI transcriptional... 62 2e-08 UniRef50_C4TWQ1 Periplasmic binding protein n=1 Tax=Yersinia kri... 62 3e-08 UniRef50_B1G538 ABC-type sugar transport system periplasmic comp... 62 3e-08 UniRef50_D1N9K7 Periplasmic binding protein/LacI transcriptional... 62 3e-08 UniRef50_B1WQL3 Putative ribose ABC transporter n=1 Tax=Cyanothe... 62 4e-08 UniRef50_B8CZP2 ABC-type sugar transport system periplasmic comp... 61 4e-08 UniRef50_Q0BAE1 Periplasmic binding protein/LacI transcriptional... 61 4e-08 UniRef50_A8GZV8 Monosaccharide-transporting ATPase n=29 Tax=Gamm... 61 6e-08 UniRef50_P39265 D-allose-binding periplasmic protein n=33 Tax=Ba... 61 6e-08 UniRef50_C2CJZ2 Galactoside ABC superfamily ATP binding cassette... 61 7e-08 UniRef50_C0C4T0 Putative uncharacterized protein n=1 Tax=Clostri... 61 7e-08 UniRef50_Q28MQ8 Periplasmic binding protein/LacI transcriptional... 60 7e-08 UniRef50_B6BMJ9 Periplasmic binding protein/LacI transcriptional... 60 7e-08 UniRef50_C0Z4C9 Putative ABC transporter substrate binding prote... 60 8e-08 UniRef50_UPI000185D1D6 putative DNA-binding response regulator/s... 60 9e-08 UniRef50_C1DLC8 ABC transporter substrate binding protein n=3 Ta... 60 9e-08 UniRef50_A1WMZ2 Periplasmic binding protein/LacI transcriptional... 60 9e-08 UniRef50_B8ZUE5 Putative D-ribose-binding protein n=2 Tax=Mycoba... 60 1e-07 UniRef50_Q48J93 Sugar ABC transporter, periplasmic sugar-binding... 60 1e-07 UniRef50_C5EKG2 Periplasmic binding protein/LacI transcriptional... 60 1e-07 UniRef50_C2L0R0 Ribose ABC superfamily ATP binding cassette tran... 60 1e-07 UniRef50_B1B7W7 D-ribose-binding periplasmic protein n=1 Tax=Clo... 60 1e-07 UniRef50_B0MFL8 Putative uncharacterized protein n=1 Tax=Anaeros... 60 1e-07 UniRef50_C6PN50 Periplasmic binding protein/LacI transcriptional... 60 1e-07 UniRef50_C6W799 Monosaccharide-transporting ATPase n=1 Tax=Dyado... 60 1e-07 UniRef50_A8S4J8 Putative uncharacterized protein n=1 Tax=Clostri... 60 1e-07 UniRef50_A0JW81 ABC-type sugar transport system periplasmic comp... 59 2e-07 UniRef50_Q01TB6 Periplasmic binding protein/LacI transcriptional... 59 2e-07 UniRef50_D2C4W6 Putative secreted solute-binding lipoprotein n=1... 59 2e-07 UniRef50_D2BKS5 Ribose ABC transporter, substrate binding protei... 59 2e-07 UniRef50_B0URZ9 Monosaccharide-transporting ATPase n=2 Tax=Gamma... 59 2e-07 UniRef50_C5RJT9 Periplasmic binding protein/LacI transcriptional... 59 2e-07 UniRef50_B8HJG2 Periplasmic binding protein/LacI transcriptional... 59 3e-07 UniRef50_A0LTR4 ABC-type sugar transport system periplasmic comp... 59 3e-07 UniRef50_B1Y299 Periplasmic binding protein/LacI transcriptional... 59 3e-07 UniRef50_D2LSY2 Periplasmic binding protein/LacI transcriptional... 59 3e-07 UniRef50_C7QZ43 Periplasmic binding protein/LacI transcriptional... 59 3e-07 UniRef50_C1D6L9 XylF, D-xylose ABC transporter, periplasmic D-xy... 59 3e-07 UniRef50_B1ZDA2 Periplasmic binding protein/LacI transcriptional... 59 3e-07 UniRef50_A1TPE5 Periplasmic binding protein/LacI transcriptional... 59 3e-07 UniRef50_A6W303 Periplasmic binding protein/LacI transcriptional... 59 3e-07 UniRef50_Q6KIS4 Xylose solute binding protein n=1 Tax=Mycoplasma... 59 3e-07 UniRef50_C7G6I7 D-galactose-binding periplasmic protein n=3 Tax=... 58 4e-07 UniRef50_B0PA90 Putative uncharacterized protein n=1 Tax=Anaerot... 58 4e-07 UniRef50_B8I0K4 Periplasmic binding protein/LacI transcriptional... 58 4e-07 UniRef50_A7NMH5 ABC-type sugar transport system periplasmic comp... 58 5e-07 UniRef50_C9MXF0 Putative uncharacterized protein n=1 Tax=Leptotr... 58 5e-07 UniRef50_A6L0Y3 Sensor protein n=17 Tax=Bacteroides RepID=A6L0Y3... 58 5e-07 UniRef50_C5EMU2 Twin-arginine translocation pathway signal n=1 T... 58 6e-07 UniRef50_Q896U1 D-ribose-binding periplasmic protein n=1 Tax=Clo... 57 7e-07 UniRef50_C9PVL5 Sensor protein n=1 Tax=Prevotella sp. oral taxon... 57 7e-07 UniRef50_C8S5N2 Monosaccharide-transporting ATPase n=1 Tax=Rhodo... 57 8e-07 UniRef50_A9HPK6 D-ribose-binding periplasmic protein n=2 Tax=Glu... 57 8e-07 UniRef50_B0P8T4 Putative uncharacterized protein n=1 Tax=Anaerot... 57 8e-07 UniRef50_C0C2H6 Putative uncharacterized protein n=1 Tax=Clostri... 57 9e-07 UniRef50_C7M5H3 Sensor protein n=1 Tax=Capnocytophaga ochracea D... 57 9e-07 UniRef50_C9Y9X5 Putative uncharacterized protein n=1 Tax=Curviba... 57 9e-07 UniRef50_C0CHG6 Putative uncharacterized protein n=1 Tax=Blautia... 57 1e-06 UniRef50_C0C5Z0 Putative uncharacterized protein n=1 Tax=Clostri... 57 1e-06 UniRef50_A7NNR8 Anti-sigma-factor antagonist n=2 Tax=Roseiflexus... 57 1e-06 UniRef50_A6LC26 Sensor protein n=6 Tax=Bacteroidales RepID=A6LC2... 57 1e-06 >UniRef50_C9Y333 D-xylose-binding periplasmic protein n=20 Tax=Proteobacteria RepID=C9Y333_CROTZ Length = 343 Score = 596 bits (1536), Expect = e-169, Method: Compositional matrix adjust. Identities = 291/330 (88%), Positives = 315/330 (95%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFV 60 MKIK ++LTLC SL+LT+ + AK+VKIGMAIDDLRLERWQKDRDIFV KAESLGAKVFV Sbjct: 14 MKIKQLILTLCASLVLTSFSGIAKDVKIGMAIDDLRLERWQKDRDIFVSKAESLGAKVFV 73 Query: 61 QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD 120 QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVV EAK+EGIKVLAYDRMIN+AD Sbjct: 74 QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVAEAKREGIKVLAYDRMINNAD 133 Query: 121 IDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGK 180 IDFYISFDNEKVGE+QA++LVD VPQGNYFLMGGSPVDNNA+LFR GQMKVLKP+VDSGK Sbjct: 134 IDFYISFDNEKVGEIQAQSLVDKVPQGNYFLMGGSPVDNNARLFRDGQMKVLKPFVDSGK 193 Query: 181 IKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVA 240 IKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGL+GKVA Sbjct: 194 IKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLAGKVA 253 Query: 241 ISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDV 300 ISGQDADLAGIKRI AGTQTMTVYKPIT LANTAAE+AVELGN ++PK+D TLNNGLK+V Sbjct: 254 ISGQDADLAGIKRIMAGTQTMTVYKPITQLANTAAEVAVELGNDKQPKSDATLNNGLKEV 313 Query: 301 PSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 PSRLLTPI V+K+NI+ TVIKDGFHK+S+L Sbjct: 314 PSRLLTPIKVDKSNIESTVIKDGFHKKSDL 343 >UniRef50_P45047 D-xylose-binding periplasmic protein n=193 Tax=Bacteria RepID=XYLF_HAEIN Length = 332 Score = 509 bits (1310), Expect = e-143, Method: Compositional matrix adjust. Identities = 250/329 (75%), Positives = 291/329 (88%), Gaps = 1/329 (0%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFV 60 MKIK+ LLTL +L + + +AH+K++KIG++IDDLRLERWQKDRDIFV KAES+GAKVFV Sbjct: 1 MKIKSALLTLVGALTVFSSSAHSKDLKIGLSIDDLRLERWQKDRDIFVNKAESMGAKVFV 60 Query: 61 QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD 120 QSANG++ Q+SQIENMIN+ +DVLVIIP+NG+VLSNV+ EAK+EGIKVLAYDR+IN+AD Sbjct: 61 QSANGDDSAQISQIENMINKNIDVLVIIPHNGEVLSNVISEAKKEGIKVLAYDRLINNAD 120 Query: 121 IDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGK 180 +DFY+SFDNEKVGELQAK++V + P+GNYFLMGGSPVDNNAKLFR GQMKVL P + SGK Sbjct: 121 LDFYVSFDNEKVGELQAKSIVAVKPEGNYFLMGGSPVDNNAKLFRKGQMKVLDPLIASGK 180 Query: 181 IKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVA 240 IKVVGDQWVD WL E AL+IMENALTAN N +DAVVASNDATAGGAIQALSAQGLSGKVA Sbjct: 181 IKVVGDQWVDSWLAEKALQIMENALTANKNNVDAVVASNDATAGGAIQALSAQGLSGKVA 240 Query: 241 ISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDV 300 ISGQDADLA IKRI G+QTMTVYKPIT LA+ AAEIAVELG ++ +A+ LNNGLK+V Sbjct: 241 ISGQDADLAAIKRIVNGSQTMTVYKPITKLADKAAEIAVELGKNEKIEANAELNNGLKNV 300 Query: 301 PSRLLTPIDVNKNNIKDTVIKDGFH-KES 328 P+ LL PI V+K NI +TVIKDGFH KES Sbjct: 301 PAYLLDPIAVDKRNINETVIKDGFHTKES 329 >UniRef50_Q2RGX1 Periplasmic binding protein/LacI transcriptional regulator n=21 Tax=Bacteria RepID=Q2RGX1_MOOTA Length = 381 Score = 426 bits (1094), Expect = e-118, Method: Compositional matrix adjust. Identities = 205/307 (66%), Positives = 252/307 (82%) Query: 20 AAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMIN 79 A + ++KIG+++DDLR ERWQ DRD+FV KA+ LGA+V VQSANG++ TQ+SQ EN+I+ Sbjct: 43 AKNGDKIKIGLSMDDLRQERWQHDRDLFVAKAKELGAEVLVQSANGDDATQLSQAENLIS 102 Query: 80 RGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKA 139 +G++VLV+IP+NG ++ +V+ A + G+KVLAYDR+I +AD+D YISFDN +VGELQA+ Sbjct: 103 QGINVLVVIPHNGDAMAPIVEAAHKAGVKVLAYDRLIRNADVDLYISFDNVRVGELQAEY 162 Query: 140 LVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALK 199 L VP+G YFLMGGSP DNNAKLFR GQM VLKP +D G IKVVGDQWV WLPE A+K Sbjct: 163 LTKKVPKGKYFLMGGSPTDNNAKLFRQGQMNVLKPLIDKGDIKVVGDQWVKDWLPEEAMK 222 Query: 200 IMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQ 259 IMENALT+NNN+IDAVVASND+TAGGAIQAL+AQ L+GKVAISGQDADLA +RI GTQ Sbjct: 223 IMENALTSNNNQIDAVVASNDSTAGGAIQALAAQNLAGKVAISGQDADLAACQRIVEGTQ 282 Query: 260 TMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTV 319 +MTVYKPIT LA AAE+AV L G+ A+ +NNG DVPS LLTPI V+K+N+ TV Sbjct: 283 SMTVYKPITTLATRAAEVAVALAKGENIGANNKVNNGKIDVPSVLLTPIMVDKDNMVQTV 342 Query: 320 IKDGFHK 326 IKDGFHK Sbjct: 343 IKDGFHK 349 >UniRef50_Q2NWM4 Putative xylose ABC transporter periplasmic component n=2 Tax=Enterobacteriaceae RepID=Q2NWM4_SODGM Length = 235 Score = 365 bits (938), Expect = e-100, Method: Compositional matrix adjust. Identities = 176/216 (81%), Positives = 194/216 (89%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFV 60 MK+ N+LLT+C +L A AK++KIGMA+DDLRLERWQKDRDIFV KAE LGA VFV Sbjct: 1 MKLNNLLLTVCAIGVLACQPALAKQLKIGMAVDDLRLERWQKDRDIFVSKAELLGASVFV 60 Query: 61 QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD 120 QSANGNEETQMSQ+ENMIN G+DVLVIIPYNGQVL+NV+ EAKQEGIKV AYDR+IN+AD Sbjct: 61 QSANGNEETQMSQVENMINFGMDVLVIIPYNGQVLTNVIAEAKQEGIKVRAYDRIINNAD 120 Query: 121 IDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGK 180 +DFYISFDNE+VGELQA +LV VPQGNYFLMGGSPVDNNAKLFRAGQM VLKP +DSG+ Sbjct: 121 VDFYISFDNERVGELQANSLVKRVPQGNYFLMGGSPVDNNAKLFRAGQMNVLKPLIDSGR 180 Query: 181 IKVVGDQWVDGWLPENALKIMENALTANNNKIDAVV 216 IKVVGDQW DGWLPENALKIMENALTANNN IDAVV Sbjct: 181 IKVVGDQWADGWLPENALKIMENALTANNNHIDAVV 216 >UniRef50_C6J071 ABC-type ribose transport system n=7 Tax=Bacteria RepID=C6J071_9BACL Length = 429 Score = 347 bits (890), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 175/299 (58%), Positives = 232/299 (77%), Gaps = 1/299 (0%) Query: 28 IGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVI 87 IGM++D L+ ERWQKDRD+F K E LG +V V +ANG++ TQ+SQ E +I++GVDVLV+ Sbjct: 117 IGMSMDTLKEERWQKDRDLFTAKVEELGGEVKVLAANGDDATQLSQAEQLISQGVDVLVV 176 Query: 88 IPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVPQG 147 I +N + + +V++A +EGIKV+AYDR+I ++D+D+YISFDN +VGELQA+A+++ P+G Sbjct: 177 IAHNAEATAPIVEKAHKEGIKVIAYDRLIRNSDVDYYISFDNVRVGELQARAVIEAAPKG 236 Query: 148 NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTA 207 N +GG+ DNNA +F+ G M VLKP + G IK+V DQ+ W PE ALK MENALTA Sbjct: 237 NIVYIGGADTDNNAHMFKEGAMNVLKPLEEKGDIKIVYDQFSKDWKPEEALKNMENALTA 296 Query: 208 NNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPI 267 NNN I VVA+ND TAGG IQAL+AQG++GK+ +SGQDADLA ++RIA GTQ MTVYKPI Sbjct: 297 NNNDIQGVVAANDGTAGGVIQALNAQGMAGKIPVSGQDADLAAVQRIAEGTQLMTVYKPI 356 Query: 268 TLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHK 326 +A TAAE+AV G+E KAD T+NNG DVPS LL PI +NK+++ + VI+DGFHK Sbjct: 357 KSIAITAAEMAVAAAKGEEVKADKTVNNGKIDVPSVLLDPIPLNKDSL-NVVIEDGFHK 414 >UniRef50_B5JEL4 Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JEL4_9BACT Length = 359 Score = 313 bits (802), Expect = 6e-84, Method: Compositional matrix adjust. Identities = 154/328 (46%), Positives = 223/328 (67%), Gaps = 3/328 (0%) Query: 6 ILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANG 65 I + + S T+ ++ ++ IG+++D L+ RWQ DRD+F+ +A+ LGA+V V SAN Sbjct: 19 IGIVISRSHTGTDSSSPDHKLLIGLSMDTLQEARWQVDRDVFLARAKELGAEVSVASANS 78 Query: 66 NEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYI 125 ++ TQ+ + +MI+ GVDV+VIIP++GQ +S V++A Q GI V+AYDR I D+D+D YI Sbjct: 79 DDSTQIRDVNSMISAGVDVIVIIPHDGQAMSEGVRQAHQAGIPVIAYDRSIQDSDLDLYI 138 Query: 126 SFDNEKVGELQAKALVDIVP---QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIK 182 +FDN KVGE QA+ L+D +P +G + G+P DNNAK+F+ GQ +L+PY+D G I+ Sbjct: 139 TFDNVKVGEAQAQYLIDHLPSPGKGRIVRIYGAPTDNNAKMFKQGQDNILQPYIDRGDIE 198 Query: 183 VVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAIS 242 V+ + W + W P NA KI A+T N + ++ASND TAGGAIQAL +GL K+ ++ Sbjct: 199 VIHEDWAENWEPANAKKITNAAITNNGSDFHGILASNDGTAGGAIQALKEEGLVSKIIVT 258 Query: 243 GQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPS 302 GQDA++A +RI G+Q MT+YKPI LA+TAAE+AV + GQ A ++NG K VPS Sbjct: 259 GQDAEMAACQRIVDGSQIMTIYKPIKALASTAAELAVSMATGQPIIARGEIDNGFKTVPS 318 Query: 303 RLLTPIDVNKNNIKDTVIKDGFHKESEL 330 L V+K+N+ TVI DGFH E+ Sbjct: 319 IFLPITSVDKSNMMQTVIADGFHSFEEV 346 >UniRef50_A6TRZ6 Monosaccharide-transporting ATPase n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TRZ6_ALKMQ Length = 353 Score = 295 bits (755), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 134/307 (43%), Positives = 222/307 (72%), Gaps = 1/307 (0%) Query: 25 EVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDV 84 ++++G+++ R ERW +D++ A +G ++ V+ ++ N + Q++Q+E ++N+G+DV Sbjct: 46 KIRVGLSLPTQREERWVRDKERMEAYAAEVGIELIVRVSDANIQEQITQVEALLNQGIDV 105 Query: 85 LVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD-IDFYISFDNEKVGELQAKALVDI 143 L++ P++ +++V++A +EG+ V++YDR+I + D +D Y+SFDN KVGELQ K + + Sbjct: 106 LILAPHDASAAASLVEQANREGVPVISYDRLITNTDKLDIYLSFDNVKVGELQGKYITEQ 165 Query: 144 VPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMEN 203 VP+G Y +M G+P DNNA LF+ G M ++P +D+GKI+V+ +Q VD W+PENAL+I+E Sbjct: 166 VPEGRYIIMSGAPTDNNATLFKQGAMSYIQPLIDAGKIEVIAEQAVDNWVPENALRIVEA 225 Query: 204 ALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTV 263 AL+AN+N++DA++A ND TAG AIQAL+AQGL+G+V I+GQDA+++ KRI GTQ+MT+ Sbjct: 226 ALSANDNQVDAILAPNDGTAGAAIQALTAQGLAGQVPITGQDAEVSAAKRIVDGTQSMTI 285 Query: 264 YKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDG 323 +K LL A IA++L NG+ + ++NG +VPS LL P V +NI++ ++ G Sbjct: 286 FKDTRLLGEEAINIAIKLANGESISTNGEVDNGRFNVPSVLLEPQVVTADNIRELLVGGG 345 Query: 324 FHKESEL 330 + E++L Sbjct: 346 YITEADL 352 >UniRef50_B0K235 Monosaccharide-transporting ATPase n=9 Tax=Clostridia RepID=B0K235_THEPX Length = 360 Score = 283 bits (724), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 141/306 (46%), Positives = 205/306 (66%), Gaps = 1/306 (0%) Query: 25 EVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDV 84 ++KIG ++ L+ ERW KDRDI + K LGA+V VQ+AN +++ Q+ Q+ ++++ +DV Sbjct: 50 KIKIGFSLGTLKEERWIKDRDIVMAKLRELGAEVLVQNANNDDQDQLKQVRYLLDQKIDV 109 Query: 85 LVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIV 144 L+I+P + + S V A++EG+KV++YDR++ +++D YISFDN KVG+L A+ LV V Sbjct: 110 LIIVPNDLEKASYAVSLAQKEGVKVISYDRLVTKSNVDLYISFDNVKVGKLMAEYLVKRV 169 Query: 145 PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENA 204 P+GNY ++ G+ DNN K+ + G VLKP ++SG IK+V + W W+ E A + Sbjct: 170 PRGNYLIINGATTDNNTKMIKEGYDSVLKPKIESGDIKIVKEDWAPNWMTEYAFN-STDE 228 Query: 205 LTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVY 264 L KIDAV+A +DA AGG I+ALS L+GKV ++ QDADLA +RI GTQ MTVY Sbjct: 229 LLQKGAKIDAVIAGDDALAGGIIEALSEHRLAGKVLVAAQDADLAACQRIVEGTQAMTVY 288 Query: 265 KPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGF 324 KPI LA A++A++L G++ T+ +G VP +L PI V+K NI DTVIKDGF Sbjct: 289 KPIDKLAEATAKMAMKLARGEKLDIKNTIYDGKYYVPYYVLEPIAVDKTNIDDTVIKDGF 348 Query: 325 HKESEL 330 H E+ Sbjct: 349 HNRDEV 354 >UniRef50_B8I3W5 Periplasmic sugar-binding protein n=2 Tax=Clostridium RepID=B8I3W5_CLOCE Length = 352 Score = 259 bits (663), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 128/331 (38%), Positives = 213/331 (64%), Gaps = 6/331 (1%) Query: 1 MKIKNILLTLCTSLLLTNVAAH-----AKEVKIGMAIDDLRLERWQKDRDIFVKKAESLG 55 +KI +L +L T +LL + ++ IG+++ L+ ERW +D + KA++ G Sbjct: 6 LKIFLLLASLITMVLLAGCSYKNPIDKPDKITIGLSMATLQEERWHRDIEALRAKAQAKG 65 Query: 56 AKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRM 115 A++ ++AN N Q+SQ+++++++ +D+LVI+P + + V+ A+ +GI+V+ YDR+ Sbjct: 66 AEILFRNANNNINDQISQVKSLLSKDIDILVIVPQDAEKSQQAVQLARNKGIRVICYDRL 125 Query: 116 INDADIDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPY 175 I +++ DFY+SFDN +VGE A +V VP+GNY L+ G+ D N+ ++ G +L Y Sbjct: 126 IKNSNTDFYVSFDNIRVGEYMASLMVSKVPKGNYILINGAKTDYNSFMYNKGFKNILGKY 185 Query: 176 VDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGL 235 + G IK+V + W + W PE+A K ++ AL + KIDA++A+ND+ AG AI+ALS + L Sbjct: 186 LYEGSIKIVDEVWANDWKPEDAFKCVDKALR-DGKKIDAIIAANDSLAGAAIKALSQRRL 244 Query: 236 SGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNN 295 +GKV ++G DAD++G +R+A GTQ +TVYKPI LA A ++ + L N + +N+ Sbjct: 245 AGKVPVAGHDADISGCQRVAEGTQLLTVYKPIDQLAEKAIDVVLGLLNNDYYACNKFIND 304 Query: 296 GLKDVPSRLLTPIDVNKNNIKDTVIKDGFHK 326 G D+P ++ P+ V K+ + DTVI GFHK Sbjct: 305 GESDIPYEMVEPVVVTKDTLVDTVISAGFHK 335 >UniRef50_B9MLQ1 Monosaccharide-transporting ATPase n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MLQ1_ANATD Length = 362 Score = 257 bits (657), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 133/306 (43%), Positives = 198/306 (64%), Gaps = 1/306 (0%) Query: 25 EVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDV 84 +V+IG A+ L+ ERW KDRDI + KA G +V +AN N+ Q++Q++ ++++ +++ Sbjct: 54 KVRIGFAMGTLKEERWFKDRDILIAKAHEKGYEVEWVNANENDVEQINQVKYLLSKNINI 113 Query: 85 LVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIV 144 L+I+P N + S+ V AK++GIKV++YDR++ ++DID Y+SF+N KVGEL AK L+ V Sbjct: 114 LIIVPNNYEKCSSAVNLAKKKGIKVISYDRLVKNSDIDVYVSFNNYKVGELMAKWLLKKV 173 Query: 145 PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENA 204 P GNY + G P D N ++ + G KVL + +I + +++ W E A + N Sbjct: 174 PYGNYVFLLGDPGDYNVQMIKEGYHKVLDSLIQKKQINSLLEKYCYNWRKEYAYNYVNN- 232 Query: 205 LTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVY 264 L +IDAV+ASND+ A GAI ALS + L+G V ++GQDAD++ +RI GTQ MTVY Sbjct: 233 LLEEGKRIDAVLASNDSLAEGAIMALSEKRLAGSVPVTGQDADISACQRIVKGTQLMTVY 292 Query: 265 KPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGF 324 KPI L + +I L G+ K + T+NNG K+VP+ + PI V+K NI DTVIKD F Sbjct: 293 KPIDKLVDLTLDIVDRLIKGKLLKPNYTINNGYKNVPTFFIDPIGVDKTNINDTVIKDNF 352 Query: 325 HKESEL 330 H E+ Sbjct: 353 HTWDEV 358 >UniRef50_A4XMF2 Monosaccharide-transporting ATPase n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XMF2_CALS8 Length = 339 Score = 237 bits (604), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 121/282 (42%), Positives = 181/282 (64%), Gaps = 1/282 (0%) Query: 25 EVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDV 84 +V IG A+ L+ ERW KDRDI + KA G +V +AN N+ Q++Q++ ++++ +++ Sbjct: 56 KVVIGFAMGTLKEERWFKDRDILIAKAHEKGYEVEWVNANENDVEQINQVKFLLSKNINI 115 Query: 85 LVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIV 144 L+I+P N + S+ V AK+ GIKV++YDR++ ++DID Y+SF+N KVGEL AK L+ V Sbjct: 116 LIIVPNNYEKCSSAVNLAKKRGIKVISYDRLVRNSDIDVYVSFNNYKVGELMAKWLIKKV 175 Query: 145 PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENA 204 P+GNY + G P D N ++ + G KVL P++ +I + +++ W E A + N Sbjct: 176 PRGNYAFLLGDPGDYNVQMIKEGYHKVLDPFIKKKQINIALEKYCYNWRKEYAYNYITNL 235 Query: 205 LTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVY 264 L N +IDA++ASND+ A GAI ALS + L+G V ++GQDAD++ +RI GTQ MTVY Sbjct: 236 LD-QNKRIDAILASNDSLAEGAIMALSEKRLAGIVPVTGQDADISACQRIIKGTQLMTVY 294 Query: 265 KPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLT 306 KPI L + EI L N + LNNG K+VP+ LT Sbjct: 295 KPIDKLVDLTFEIVDRLINNKSLNPPLMLNNGYKNVPTFFLT 336 >UniRef50_Q11DN9 D-xylose ABC transporter, periplasmic substrate-binding protein n=50 Tax=Bacteria RepID=Q11DN9_MESSB Length = 347 Score = 231 bits (589), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 128/302 (42%), Positives = 185/302 (61%), Gaps = 7/302 (2%) Query: 28 IGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVI 87 IG++ + + ERW+ D + E+ G A + Q++ +E++I +G + L+I Sbjct: 29 IGVSWSNFQEERWKTDEAAIKAQIEADGNTYISADAQSSPAKQLTDVESLIAQGANALII 88 Query: 88 IPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVPQG 147 + + + V+ A EGI V+ YDR+I + D FY++FDN++VG +QA+A+ ++ P+G Sbjct: 89 LAQDASAVGPAVENAVAEGIPVIGYDRLIENPDA-FYLTFDNKEVGRMQARAVFEVAPEG 147 Query: 148 NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTA 207 NY + GS D NA GQM+VLK +DSGKIK VG+ + DGWLP NA + ME LTA Sbjct: 148 NYVFIKGSSADPNADFLFEGQMEVLKEAIDSGKIKNVGEAYTDGWLPANAQRNMEQFLTA 207 Query: 208 NNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPI 267 NNN++ AVVASND TAGGAI AL AQGL+G V +SGQD D A + RIA GTQT++V+K Sbjct: 208 NNNEVAAVVASNDGTAGGAIAALEAQGLAGSVPVSGQDGDHAALNRIALGTQTVSVWKDA 267 Query: 268 TLLANTAAEIAVELGNG---QEPKADTTLNNGLKDVP--SRLLTPIDVNKNNIKDTVIKD 322 L AA+IA +L G + + T G V S L P+ + K+N+ + VI Sbjct: 268 RELGKAAAQIANQLAEGTAMDQVEGATKWAEGPNKVEMNSVFLKPVPITKDNL-NLVIDA 326 Query: 323 GF 324 G+ Sbjct: 327 GW 328 >UniRef50_A9KQP5 Periplasmic binding protein/LacI transcriptional regulator n=6 Tax=Clostridiales RepID=A9KQP5_CLOPH Length = 347 Score = 228 bits (582), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 127/300 (42%), Positives = 180/300 (60%), Gaps = 6/300 (2%) Query: 27 KIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLV 86 +IGM+ D +ERWQ+DRDIFV A LGA+V VQ+A+G+ Q+ QIE I + VD +V Sbjct: 38 QIGMSFDSFVIERWQRDRDIFVATANDLGAEVNVQNASGDVNEQVRQIEYFIEKQVDAIV 97 Query: 87 IIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDI-VP 145 II + + LS VVK+AK++GIK++AYDR+I +AD+D YISFDNE VG++ A A V+ + Sbjct: 98 IIGIDSEKLSTVVKKAKEKGIKIIAYDRLIMNADVDLYISFDNEAVGKMMASAFVENGLT 157 Query: 146 QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENAL 205 +G + G DNN + G V+K + I+++ D W E K + + Sbjct: 158 KGKVLMFCGPMTDNNVSMIEKGFQSVIKEH----DIEILDILHADNWRAEETRKYVNEHI 213 Query: 206 TANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYK 265 + DA++ ND AG I L+ L+GKV + GQDADL +RI GTQ MTVYK Sbjct: 214 DV-VKEADAIMCGNDGLAGQTIYDLAELRLAGKVMVVGQDADLEACQRIVEGTQLMTVYK 272 Query: 266 PITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFH 325 P+ LA AAE ++L G+E A + +N+G DVP L I V N+++ +I GFH Sbjct: 273 PVAKLAQAAAEDTIKLVLGEELGATSEINDGSYDVPYIALETIAVTAKNLEEVIINSGFH 332 >UniRef50_C8WRB6 Xylose binding protein transport system n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WRB6_ALIAD Length = 370 Score = 228 bits (580), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 131/308 (42%), Positives = 190/308 (61%), Gaps = 10/308 (3%) Query: 26 VKIGMAIDDLRLE-RWQKD-RDIFVKKAESL--GAKVFVQSANGNEETQMSQIENMINRG 81 VKI + + RW+ D R F+ + L A++ +A G+E TQ+ Q+E+ I G Sbjct: 51 VKIAFLMPETNTSPRWEYDDRPDFIAAMKKLDPNAQIIYANAQGSEATQLQQVESAITEG 110 Query: 82 VDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALV 141 +LV+ P NG + +V EA + + V++YDR+I +A +D+Y+SF+N +VG+LQ + + Sbjct: 111 AKLLVVAPVNGFAATTIVTEAAKAHVPVISYDRLIQNAKVDYYVSFNNVEVGKLQGEYIA 170 Query: 142 DIVPQGNYFLM-GGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKI 200 +G +M G+P D NAK F G VL P SGK+K+ +Q+ W + AL Sbjct: 171 QHTKKGGTVVMLDGAPTDPNAKQFAQGAHDVLDPLFKSGKLKLGYEQFTPNWDSQQALTE 230 Query: 201 MENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRI-AAGTQ 259 M+ ALT +N +DAV+A+ND AG AIQAL Q + G + ++GQDA AG+ RI GTQ Sbjct: 231 MQQALTRLHNHVDAVLAANDNLAGAAIQALEQQHIKG-IPVTGQDATDAGLHRIYYEGTQ 289 Query: 260 TMTVYKPITLLANTAAEIAVELGNGQEPKA---DTTLNNGLKDVPSRLLTPIDVNKNNIK 316 +MTVYKPI AN AA++A +L G++P A + T+NNG +VPS LL PI V K+N+ Sbjct: 290 SMTVYKPIKEEANAAAQLAYDLITGKKPPASLVNGTVNNGATNVPSVLLQPIVVTKSNVA 349 Query: 317 DTVIKDGF 324 TVIKDGF Sbjct: 350 STVIKDGF 357 >UniRef50_A5FZZ2 Monosaccharide-transporting ATPase n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FZZ2_ACICJ Length = 369 Score = 209 bits (532), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 130/327 (39%), Positives = 195/327 (59%), Gaps = 10/327 (3%) Query: 8 LTLCTSLLLTNVAAH---AKEVKIGMAIDDLRLERWQK-DRDIFVKKAESL--GAKVFVQ 61 LT + +T + H +K+ I + + R+++ DR F+K A + AK+ V Sbjct: 21 LTAAHAQSVTQPSVHQISSKKTTIAFLLPENSSPRYEQVDRPWFIKMAHAADPNAKLIVS 80 Query: 62 SANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADI 121 +AN + +TQ++Q E+ I+ G DVLV+ P +G+ + +V A + +KV++YDR+I D+ Sbjct: 81 NANSSPDTQLNQAESAISNGADVLVVDPVDGKAGAAIVNYAARNHVKVISYDRLIQDSKP 140 Query: 122 DFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGK 180 D+Y+SFDN KVGELQ + + P G+ ++ G+P D NA FR G M VL P SGK Sbjct: 141 DYYVSFDNTKVGELQGEYIAKHTKPGGSVMMINGAPTDPNAFDFRKGAMNVLGPLFKSGK 200 Query: 181 IKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVA 240 + + W P+NA + + ALT +NK++AV+A+ND TA G I+AL A GL+GKV Sbjct: 201 LHLAYSVMTPDWSPQNAFEESQQALTRLHNKVNAVLAANDGTASGVIRALQAVGLAGKVP 260 Query: 241 ISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKA---DTTLNNGL 297 ++GQDA G+ I G Q+MTV+K + A AAE+AV + +P A + NN + Sbjct: 261 VTGQDATNGGLTFILEGLQSMTVFKYVPEEAAAAAELAVAVATDTKPPAGLLNGKTNNKM 320 Query: 298 KDVPSRLLTPIDVNKNNIKDTVIKDGF 324 DVPS LL P+ V K NI +VIK G+ Sbjct: 321 IDVPSVLLKPLVVTKANIAGSVIKSGY 347 >UniRef50_P25548 Multiple sugar-binding periplasmic receptor chvE n=76 Tax=Bacteria RepID=CHVE_AGRT5 Length = 354 Score = 201 bits (512), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 130/324 (40%), Positives = 185/324 (57%), Gaps = 21/324 (6%) Query: 28 IGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVI 87 +G+A+ RW D + VK+ + G K +Q A+ + Q+SQIENM+ +GV VLVI Sbjct: 30 VGIAMPTKSSARWIDDGNNIVKQLQEAGYKTDLQYADDDIPNQLSQIENMVTKGVKVLVI 89 Query: 88 IPYNGQVLSNVVKEAKQEGIKVLAYDRMI-NDADIDFYISFDNEKVGELQAKALVDIV-- 144 +G LS+V+K+A ++GIKV+AYDR+I N D+ +Y +FDN +VG LQA ++ D + Sbjct: 90 ASIDGTTLSDVLKQAGEQGIKVIAYDRLIRNSGDVSYYATFDNFQVGVLQATSITDKLGL 149 Query: 145 ----PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKV-VGDQWVDG-----WLP 194 N L GGSP DNNA F G M VLKPY+DSGK+ V G +D W P Sbjct: 150 KDGKGPFNIELFGGSPDDNNAFFFYDGAMSVLKPYIDSGKLVVKSGQMGMDKVGTLRWDP 209 Query: 195 ENALKIMENALTA--NNNKIDAVVASNDATAGGAIQALSAQGLSGK----VAISGQDADL 248 A M+N L+A + K+DAV++ D + G I +L G K +SGQDA++ Sbjct: 210 ATAQARMDNLLSAYYTDAKVDAVLSPYDGLSIGIISSLKGVGYGTKDQPLPVVSGQDAEV 269 Query: 249 AGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKA-DT-TLNNGLKDVPSRLLT 306 +K I AG Q T++K LA + + G+EP+ DT T NG+K VPS LL Sbjct: 270 PSVKSIIAGEQYSTIFKDTRELAKVTVNMVNAVMEGKEPEVNDTKTYENGVKVVPSYLLK 329 Query: 307 PIDVNKNNIKDTVIKDGFHKESEL 330 P+ V K N K ++ G++KE +L Sbjct: 330 PVAVTKENYKQVLVDGGYYKEDQL 353 >UniRef50_D0LRU4 D-xylose transporter subunit XylF n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LRU4_HALO1 Length = 374 Score = 200 bits (508), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 116/325 (35%), Positives = 191/325 (58%), Gaps = 18/325 (5%) Query: 21 AHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINR 80 A +K+G + ++ ER+Q+D+ F+ KA+SLGA+V SAN NE+TQ+S+ E M+ + Sbjct: 47 AEEGPLKVGFLLKTMQEERYQRDKKAFIDKAQSLGAEVLFDSANNNEQTQLSKFETMLAQ 106 Query: 81 GVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKAL 140 G V+V+ P N N+VK A +EG++V+ YD M+ + +D + D+ VG+LQ +A+ Sbjct: 107 GAKVIVLQPVNTGTAGNMVKMANEEGVRVVGYDSMLVNGPLDVQVMQDSWAVGKLQGEAM 166 Query: 141 VDIVP-------QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWL 193 V+ + +G L+ G P D+NA G + ++ ++ +++V ++ +GW Sbjct: 167 VEWLKAKNDGKVEGKVALIKGQPGDSNANAMSEGALTIIN---ENEGLELVAEESHEGWS 223 Query: 194 PENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGL--SGKVAISGQDADLAGI 251 + A+ EN LT N +DA +A+N A G I AL QGL + KV ++G DADL I Sbjct: 224 SDKAMATAENVLTKYENGVDAFIANNSGMARGVIAALQNQGLDDATKVFVAGSDADLVNI 283 Query: 252 KRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEP------KADTTLNNGLKDVPSRLL 305 + +A G Q + ++K IT LA TAAEIAV L + +AD T+NNG +VP+ + Sbjct: 284 QYVAQGKQAVEIWKKITPLAETAAEIAVTLAKSPDKPVTELVEADRTINNGAVEVPTIVT 343 Query: 306 TPIDVNKNNIKDTVIKDGFHKESEL 330 + V K+N++DTV+ F+ + ++ Sbjct: 344 PVVLVTKDNVEDTVVAGEFYTKEQV 368 >UniRef50_D2Q8V2 ABC transporter (Substrate-binding protein) n=2 Tax=Bifidobacterium dentium RepID=D2Q8V2_9BIFI Length = 371 Score = 199 bits (506), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 122/324 (37%), Positives = 185/324 (57%), Gaps = 22/324 (6%) Query: 23 AKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGV 82 A +V IG+++ + LERW+ D K+ E G KV +Q A+G + Q SQI+NM N G+ Sbjct: 39 ASDVNIGISMPEQMLERWKIDGSNLKKQLEGYGYKVTLQYADGKTDLQTSQIQNMANNGM 98 Query: 83 DVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD-IDFYISFDNEKVGELQAKALV 141 D +V+ +G ++A+ G K++AYDR+I + D +D+Y +F E+VG++Q + + Sbjct: 99 DYVVVASIDGTSTGAACEQAQSNGAKIIAYDRLIMNTDAVDYYATFSLEEVGKMQGEYIE 158 Query: 142 DIV-----PQG--NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKI-----KVVGDQ-- 187 + +G N LM GSP DNNA + G VL Y SG + KV D+ Sbjct: 159 KALGLKDGKKGPFNVELMAGSPTDNNAGYYFKGAWSVLGKYYKSGVLQAKSGKVPADETE 218 Query: 188 W----VDGWLPENALKIMENALTANNN---KIDAVVASNDATAGGAIQALSAQGLSGKVA 240 W +D W + A MEN + + N K+DAV+A NDA A G + A+ G Sbjct: 219 WQSIGIDNWDRQKAQNEMENRINSFYNDGTKLDAVLAQNDAEALGTVNAVEGAGWDYYPV 278 Query: 241 ISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDV 300 I+GQDA+ A ++ I G Q+ TVYK LA A++ +L +G+EP+A T NNG KDV Sbjct: 279 ITGQDAEKANVQAIVKGKQSETVYKDTRELAKATAQMIKDLVDGKEPEAKDTFNNGTKDV 338 Query: 301 PSRLLTPIDVNKNNIKDTVIKDGF 324 P++LLTP+ V+K N+K+ ++ G+ Sbjct: 339 PTQLLTPVSVDKTNLKEVLVDGGY 362 >UniRef50_C2AIY5 Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=1 Tax=Tsukamurella paurometabola DSM 20162 RepID=C2AIY5_TSUPA Length = 366 Score = 198 bits (504), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 124/315 (39%), Positives = 182/315 (57%), Gaps = 20/315 (6%) Query: 28 IGMAIDDLRLERWQK-DRDIFVKKAESL--GAKVFVQSANGNEETQMSQIENMINRGVDV 84 I + + + + R++ D+ +F KK L KV +A+ +E Q Q+E I G Sbjct: 45 IALLLPESKTTRYEAFDKPLFEKKVAELCSSCKVSYYNADQDEAKQSQQVETAITAGAKA 104 Query: 85 LVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIV 144 +V+ P NG +V AK I V+AYDR I A D+Y+SFDNE+VG +Q K+LVD + Sbjct: 105 IVLGPVNGDGAGGMVASAKNAKIPVIAYDRFI--AGADYYLSFDNEQVGRIQGKSLVDAL 162 Query: 145 P-QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMEN 203 +GN ++ G+P D NA F+AG V+ SG I+V+G+ W P+ A + + + Sbjct: 163 GGRGNILMLNGAPSDPNAAQFKAGARSVIG---QSG-IRVIGEYDNPDWSPDKAQQFVTD 218 Query: 204 ALTANN-NKIDAVVASNDATAGGAIQALSAQGLSGKV--AISGQDADLAGIKRIAAGTQT 260 L+ N + I V A+ND AGG + AL+ G+S I+GQDA+LA ++RI AG Q+ Sbjct: 219 QLSRNKPSDIQGVYAANDGQAGGVVAALTGAGVSADALPPITGQDAELAAVQRIVAGRQS 278 Query: 261 MTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGL-----KDVPSRLLTPIDVNKNNI 315 MTVYKPI + ANTAAE+AV L G++ TT +G+ KDV S + TPI V K N+ Sbjct: 279 MTVYKPIAIEANTAAEVAVALATGKD--VPTTTASGIQRSTFKDVSSYIFTPIAVTKANV 336 Query: 316 KDTVIKDGFHKESEL 330 TV+ D F+ ++ Sbjct: 337 ASTVVADKFYTADQI 351 >UniRef50_B1G9I5 Monosaccharide-transporting ATPase n=2 Tax=Burkholderia graminis C4D1M RepID=B1G9I5_9BURK Length = 358 Score = 194 bits (492), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 102/304 (33%), Positives = 175/304 (57%), Gaps = 1/304 (0%) Query: 28 IGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVI 87 IG + RW DR F K+A+ LG + +Q AN + TQ SQ++ M+++G+ LVI Sbjct: 50 IGFSFPSFDAFRWPHDRHYFEKRADELGLRYIIQGANEDVATQDSQVDAMLSQGIKALVI 109 Query: 88 IPYNGQVLSNVVKEAKQEG-IKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVPQ 146 IP N +V+ K+E I +++Y+ +I +D++ DN VGELQA+ + + Sbjct: 110 IPVNVDAGKQIVERVKREAKIPIISYNYVIPSTAVDYWAGRDNYFVGELQARQALQEAKK 169 Query: 147 GNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALT 206 GN+ ++ G + A+ G ++VLKP++DSG+I++V QW D W PE ALK +E+ALT Sbjct: 170 GNWVIVSGPEGIDVARQKTEGALRVLKPHIDSGEIRIVSHQWHDAWSPEGALKQVEDALT 229 Query: 207 ANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKP 266 ++NN I AV+++ D A GA++AL+ Q L+GKV + G+D + I AG M+ + Sbjct: 230 SHNNNIQAVISNEDGMALGALRALAEQKLAGKVWLCGEDCWPEVAREIVAGRINMSAWTD 289 Query: 267 ITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHK 326 + + AA+ A L +GQ P + ++ + +P + + VN+ + D + + + K Sbjct: 290 LIQMGRVAADAAFALTHGQVPPGNDSITVSGRKIPGMRIGSLGVNRTTLPDFLKRTDWLK 349 Query: 327 ESEL 330 +++ Sbjct: 350 PADI 353 >UniRef50_UPI0001C31C00 xylose binding protein transport system n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31C00 Length = 373 Score = 192 bits (489), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 116/301 (38%), Positives = 180/301 (59%), Gaps = 8/301 (2%) Query: 38 ERWQ-KDRDIFVKKAESL--GAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQV 94 +R++ +D+ +F + + GAKV +A G+ Q++Q E+ I G DV+V+ P + Sbjct: 61 DRFENQDKPLFEAAVKEIAPGAKVIANNAEGDSARQVTQTESAITNGADVIVVSPLDEAA 120 Query: 95 LSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVPQG-NYFLMG 153 + + +A+Q I V++YD ++ D +DFY+SFDNE+VGELQ + L + G + + Sbjct: 121 GAAIADKAEQARIPVVSYDGLLTDGTVDFYVSFDNERVGELQGEYLARELRDGASIAFIN 180 Query: 154 GSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKID 213 G + F+AG + L P ++SG++++ + + P+ +ME ALT N+++D Sbjct: 181 GDQSIAPGRQFKAGAHRALDPLIESGRLRLAYEGDAQQFDPQKGRTLMEQALTRLNDRVD 240 Query: 214 AVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANT 273 V+A+ND AGG + AL + L+GKV ++GQDA AG++RI G QTM+VYK I A Sbjct: 241 GVIAANDGLAGGVVNALEPRNLTGKVLVTGQDATDAGLQRILLGQQTMSVYKAIKQEAEA 300 Query: 274 AAEIAVELGNGQEPK----ADTTLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESE 329 AAE+AV LG G K A +T +NG DVPS LL P+ V ++NI DTV DGF E Sbjct: 301 AAEVAVALGEGDAEKVRSMATSTTDNGAGDVPSILLEPVVVTQDNIVDTVFADGFTTEER 360 Query: 330 L 330 + Sbjct: 361 V 361 >UniRef50_D1C9K0 ABC-type xylose transport system periplasmic component-like protein n=3 Tax=Bacteria RepID=D1C9K0_SPHTD Length = 434 Score = 192 bits (488), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 127/317 (40%), Positives = 183/317 (57%), Gaps = 15/317 (4%) Query: 27 KIGMAIDDLRLERWQK-DRDIFVKKAESLG--AKVFVQSANGNEETQMSQIENMINRGVD 83 I + + + + R++ DR F + L ++ +AN + TQ Q E + G Sbjct: 105 TIALLLPETKTARYESADRPFFEAYFQELCPNCQIIYNNANQDAATQQQQAEAALTNGAQ 164 Query: 84 VLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI-NDADIDFYISFDNEKVGELQAKALVD 142 VLV+ P + + + ++A+ +G+ V+AYDR I N + +YISFDN +VG LQA+ LVD Sbjct: 165 VLVLDPVDSAAAAAIAEQAQAQGVPVIAYDRAILNSEGVSYYISFDNVEVGRLQAQTLVD 224 Query: 143 IV-----PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENA 197 + PQ ++ GSP DNNA F+ G V P VD+G++ + + W P+ A Sbjct: 225 ALEGVDDPQ--IVMINGSPTDNNAGEFKEGAHSVFDPLVDAGELTIAMEYDTPDWSPDQA 282 Query: 198 LKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAG 257 M+ ALTA N++D V A+ND TA GAI A+ A G+S ++GQDA+LAGI+RI G Sbjct: 283 QNEMQQALTALGNQVDGVYAANDGTASGAIAAMKAAGISPLPPVTGQDAELAGIQRILIG 342 Query: 258 TQTMTVYKPITLLANTAAEIAVELGNGQE-PKADT---TLNNGLKDVPSRLLTPIDVNKN 313 Q MTVYK I A AAE+A L GQ+ P++ T T NNG DVP+ LLTP+ V ++ Sbjct: 343 EQYMTVYKAIQPEAEIAAELAFALLTGQDVPESVTGGQTANNGATDVPAILLTPVAVTQD 402 Query: 314 NIKDTVIKDGFHKESEL 330 NI DTV+ D F E+ Sbjct: 403 NIADTVVADDFWTVDEI 419 >UniRef50_A0QT42 ABC transporter n=2 Tax=Actinomycetales RepID=A0QT42_MYCS2 Length = 365 Score = 191 bits (484), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 128/328 (39%), Positives = 186/328 (56%), Gaps = 29/328 (8%) Query: 28 IGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVI 87 +G+A+ ERW D V + ++LG +Q + + Q+SQIENMI +GV +LVI Sbjct: 41 VGIAMPTKSSERWVADGQNMVDQFKALGYDTDLQYGDDVVQNQVSQIENMITKGVKLLVI 100 Query: 88 IPYNGQVLSNVVKEAKQEGIKVLAYDRMI-NDADIDFYISFDNEKVGELQAKALVDI--V 144 P +G L+N ++ A I V++YDR+I ++D+Y +FDN KVG LQA +VD V Sbjct: 101 APIDGSSLTNTLQHAADLKIPVISYDRLIKGTPNVDYYATFDNTKVGVLQANYIVDTLGV 160 Query: 145 PQG----NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQ----------WVD 190 G N L GSP DNNA F G M VL+PY+DSGK+ V Q W D Sbjct: 161 ADGKGPFNLELFAGSPDDNNATYFFQGAMSVLQPYIDSGKLVVKSGQTTFDQIATLRW-D 219 Query: 191 GWLPENAL-KIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVA-----ISGQ 244 G L ++ + ++ A T+ ++DAV++ D + G I AL + G G A ++GQ Sbjct: 220 GGLAQSRMDNLLSQAYTS--GRVDAVLSPYDGISRGVISALKSAGY-GNAAKPLPIVTGQ 276 Query: 245 DADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKA-DT-TLNNGLKDVPS 302 DA+LA +K I AG QT TV+K LA A + A + G P+ DT T +NG+K VPS Sbjct: 277 DAELASVKSIVAGEQTQTVFKDTRELAKAAVQEADAVLTGGTPQVNDTETYDNGVKVVPS 336 Query: 303 RLLTPIDVNKNNIKDTVIKDGFHKESEL 330 LL P+ V+K+N K +I G++ E+++ Sbjct: 337 YLLDPVSVDKSNYKKVLIDSGYYTETQV 364 >UniRef50_A4AIX2 Solute-binding protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AIX2_9ACTN Length = 342 Score = 187 bits (476), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 118/331 (35%), Positives = 176/331 (53%), Gaps = 18/331 (5%) Query: 3 IKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQK-DRDIFVKKAESLGAKVFVQ 61 ++LL CT L E I + + + + R++ DR F K L K V Sbjct: 2 FASLLLGGCT---LIGANGADAEYTIALLLPESKTARYEAYDRPFFEAKVAELCPKCEVI 58 Query: 62 SANGNEET--QMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDA 119 AN +++ Q Q E+ +G+ VLV+ P + +V A+ + V++YDR+I Sbjct: 59 YANADQDPVKQQQQAESAFAQGISVLVLDPVDSSAAVTIVAAAQSRKVPVISYDRLIGSP 118 Query: 120 DIDFYISFDNEKVGELQAKALV-----DIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKP 174 ++ F++SFDNEKVG LQ KAL+ D + GN ++ GSP DNN++LF+ G V Sbjct: 119 ELAFWVSFDNEKVGSLQGKALIERLAADGLSSGNIAMINGSPTDNNSRLFKKGAHNV--- 175 Query: 175 YVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQG 234 +D VV + W P+ A + M + +T N + V A+NDATAGGAI AL A G Sbjct: 176 -IDGSAFTVVAEFDTPDWSPDKAQEWMASQVTQFGNSLVGVYAANDATAGGAIAALKAGG 234 Query: 235 LSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLN 294 + ++GQDA+L I+RI +G Q MT+YK A AA AV L NG+ + Sbjct: 235 VMPLPPVTGQDAELTAIQRIVSGDQYMTIYKDFKREAEIAATHAVALLNGKTLVGQSEET 294 Query: 295 NGLKDVPSRLLTPIDVNKNNIKDTVIKDGFH 325 NG +P+ LL+P+ V +NI +TV+ DG + Sbjct: 295 NG---IPTTLLSPVIVTIDNIMETVVADGLY 322 >UniRef50_C5ESX5 Multiple sugar-binding periplasmic receptor chvE n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ESX5_9FIRM Length = 357 Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 123/349 (35%), Positives = 189/349 (54%), Gaps = 25/349 (7%) Query: 7 LLTLCTSLLLTNVA----AHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQS 62 L+ C L + +A + +K+ IG+++ L R QKD++ K +G +V VQ Sbjct: 8 LMVTCMVLGMAAMALGGCSSSKKKVIGVSLPTQDLARTQKDQEYLTKYLTEMGYEVNVQF 67 Query: 63 ANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRM-INDADI 121 G+ Q S IENMI GV L+I P++ ++ V++ A + I V++YD + +N I Sbjct: 68 GKGDANIQASSIENMITSGVAGLIISPFDSSSMTKVIELAHENNIPVISYDSLCLNTEYI 127 Query: 122 DFYISFDNEKVGELQAKALVDI--VPQG----NYFLMGGSPVDNNAKLFRAGQMKVLKPY 175 D+Y + D E +G QA+ +VD V +G N ++ G P DNNA F G M VL PY Sbjct: 128 DYYSADDLEGIGACQAQYIVDHLGVAEGKGPFNIEIVAGDPADNNATYFYKGAMDVLSPY 187 Query: 176 VDSGKIKVVGDQ---WVDG---WLPENALKIMENALTA--NNNKIDAVVASNDATAGGAI 227 ++ G + V Q V G W A M++ L+ + ++DAV+ ND A GAI Sbjct: 188 LEDGSLVVPSGQIEFAVCGTPEWDGSKAQSRMDSILSTYYTDKRVDAVLTQNDGIALGAI 247 Query: 228 QALSAQGLSGK----VAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGN 283 +L + G +GQD D+A IK I AG QTMTV+K I++LA AA++ L Sbjct: 248 SSLKSVGYGSSDMPLPITTGQDCDIASIKSILAGEQTMTVFKDISVLAKNAADVIDSLVK 307 Query: 284 GQEPKAD--TTLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 G+EPK + TT NNG+KDV + L+ P ++K+N + + G++ + L Sbjct: 308 GEEPKLENYTTFNNGVKDVKATLVIPKALDKDNCDELLFDSGYYSKDML 356 >UniRef50_B1VWK1 Putative ABC transporter solute-binding protein n=7 Tax=Streptomyces RepID=B1VWK1_STRGG Length = 370 Score = 179 bits (454), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 122/315 (38%), Positives = 175/315 (55%), Gaps = 24/315 (7%) Query: 25 EVKIGMAIDDLRLERWQK-DRDIFVKK-AESLGAKVFVQSANGNEET--QMSQIENMINR 80 ++KIG+ + + + R++K DR I KK +E G K V AN ++ Q ++ MI Sbjct: 44 DLKIGLLLPENQTARYEKFDRPIIEKKISELTGGKGKVTYANAKQDANAQAQHVDTMITN 103 Query: 81 GVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKAL 140 VD L++ + + ++N +K+AK GI V+A+DR+ + ID Y SFDNE+VG Q AL Sbjct: 104 KVDALIVGAVDSKAIANSIKKAKDAGIPVVAFDRLA-EGPIDAYTSFDNEEVGRAQGTAL 162 Query: 141 V----DIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPEN 196 + D G +M G+ D NA LF+ G VL GK+K + W PEN Sbjct: 163 LEALGDKADGGTIVMMNGAITDPNAALFKKGAKSVL-----DGKVKYGKEYDTKEWKPEN 217 Query: 197 ALKIMENALTA-NNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIA 255 A ME A+TA +KID V ++ND AGG I AL G+S ++GQDA+LAG++RI Sbjct: 218 ANANMEAAITALGKDKIDGVYSANDGMAGGIITALKGAGISPLPPVTGQDAELAGVQRIV 277 Query: 256 AGTQTMTVYKPITLLANTAAEIAVELGNGQE------PKADTTLNNGLKDVPSRLLTPID 309 G Q M+VYK AAE+AV L G++ K D+ G +P+ L+ + Sbjct: 278 TGEQFMSVYKSYPAEGIVAAEMAVALAKGEKLDSIATSKVDSATTKG---IPTVLVPVVS 334 Query: 310 VNKNNIKDTVIKDGF 324 + K+NIKDTVIKDG Sbjct: 335 LTKDNIKDTVIKDGI 349 >UniRef50_C1RNE3 Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=4 Tax=Actinobacteria (class) RepID=C1RNE3_9CELL Length = 376 Score = 177 bits (450), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 118/340 (34%), Positives = 186/340 (54%), Gaps = 27/340 (7%) Query: 17 TNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIEN 76 T A +++ +G+A+ LERW +D + G + +Q A+ + Q++Q+EN Sbjct: 36 TGDAGSSEDTVVGIAMPTKALERWNRDGAHLEGLLQDAGFETSLQFADNKVDQQITQLEN 95 Query: 77 MINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDA-DIDFYISFDNEKVGEL 135 MIN+G D+LVI +G L+ +++A ++GI V+AYDR+IND ++D+Y +FDN VG++ Sbjct: 96 MINQGADILVIASIDGTALAPTLEQAAEQGITVIAYDRLINDTPNVDYYATFDNYGVGKM 155 Query: 136 QAKALV---DIVPQGNYF---LMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVG---- 185 Q + +V D+ F GSP DNNAK F AG VLK YVDSG++ V Sbjct: 156 QGEFIVEQLDLAGGAGPFNLEPFAGSPDDNNAKFFFAGAWDVLKEYVDSGQLVVPSGKAP 215 Query: 186 ---DQW----VDGWLPENALKIMENALT---ANNNKIDAVVASNDATAGGAIQALSAQGL 235 D W V GW + A MEN L A K+D V++ ND+ A G QAL+ G Sbjct: 216 ASNDDWQSIGVQGWSSDTAQSEMENRLNSFYAGGTKVDVVLSPNDSLALGIAQALAGNGY 275 Query: 236 S---GKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKA--D 290 + ++GQDAD A + + G Q+M+V+K L + A + ++ G E + + Sbjct: 276 APGPDYPILTGQDADKANVLNMIEGKQSMSVWKDTRTLGDRTATMIEQIVAGDEVEVNDE 335 Query: 291 TTLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 T +NG K VP+ LL P + + ++ T++ GF+ ++L Sbjct: 336 ETYDNGEKVVPTYLLPPQVITPDTVQ-TLVDSGFYTAADL 374 >UniRef50_A9KQP6 Putative solute-binding component of ABC transporter n=4 Tax=Clostridiales RepID=A9KQP6_CLOPH Length = 355 Score = 174 bits (442), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 114/321 (35%), Positives = 177/321 (55%), Gaps = 18/321 (5%) Query: 28 IGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVI 87 +G+A+ L+RW +D K+ + G +V +Q A+ + +TQ+SQIENMI+ G +LVI Sbjct: 34 VGVAMPTKDLQRWNQDGSNMEKQLKDAGYEVDLQYASNDVQTQVSQIENMISNGCKLLVI 93 Query: 88 IPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD-IDFYISFDNEKVGELQAKALVDIV-- 144 G L V+ +AK++GI V+AYDR+I ++D + +Y +FDN VG Q + + + + Sbjct: 94 ASIEGDSLGTVLAQAKKKGISVIAYDRLIMNSDAVSYYATFDNYMVGTKQGEYIKEKLNL 153 Query: 145 --PQGNYFL--MGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQ------WVDGWLP 194 +G + L G P DNNA+ F G M VLKPYVD G + V GW Sbjct: 154 ETAKGPFNLEIFTGDPGDNNARFFYGGAMDVLKPYVDGGVLVVKSGSVAFEKVATAGWST 213 Query: 195 ENALKIME---NALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGI 251 E A M+ + A+ K+DAV+ SND+TA G AL+A ++GQD D+A + Sbjct: 214 ETAQNRMDAIIASYYADGTKLDAVLCSNDSTALGVTNALTASYKGEWPIVTGQDCDIANV 273 Query: 252 KRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQE-PKADT-TLNNGLKDVPSRLLTPID 309 K + G Q+M+++K LA+ ++ + G E P DT + +NG VPS L P+ Sbjct: 274 KNMLDGKQSMSIFKDTRTLASQVVKMVDAIMKGGEAPVNDTKSYDNGNGIVPSYLCEPVF 333 Query: 310 VNKNNIKDTVIKDGFHKESEL 330 + N K+ +I G++ E +L Sbjct: 334 ADATNYKELLIDSGYYTEDQL 354 >UniRef50_C5RJ04 D-xylose ABC transporter, periplasmic substrate-binding protein n=1 Tax=Clostridium cellulovorans 743B RepID=C5RJ04_CLOCL Length = 247 Score = 174 bits (440), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 90/234 (38%), Positives = 146/234 (62%), Gaps = 5/234 (2%) Query: 98 VVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGS-P 156 +V+ + G+K++ Y+ +I + DID ++ F++ + G++Q + L+ VP+GNY +M P Sbjct: 12 MVEMVRNAGVKLVTYEALIINTDIDIFVGFNHLRAGQIQGRFLITKVPKGNYIIMYADLP 71 Query: 157 VDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVV 216 D + G M + P V G IK+V + W P+ A MENAL +NN KIDA++ Sbjct: 72 YDT---FLKDGAMDFITPLVIIGNIKIVAVGSIKDWSPKIASSFMENALISNN-KIDAIL 127 Query: 217 ASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAE 276 A ND+ AG AI+ L QGL+GKV ++G DA+L+ I+RI GTQ MT++K A + Sbjct: 128 APNDSIAGVAIEVLQKQGLAGKVVVTGMDAELSAIRRIIKGTQAMTLFKDTRESARKTID 187 Query: 277 IAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 +A++LGNG++ D + NG +PS L+TP+ V+K+NI + +IK G+ + ++ Sbjct: 188 VAIKLGNGEKVLTDEWMYNGKNHIPSILITPVFVDKDNIDEVLIKSGYLTKEDI 241 >UniRef50_Q47NL4 Solute-binding protein n=26 Tax=Actinomycetales RepID=Q47NL4_THEFY Length = 372 Score = 172 bits (436), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 114/320 (35%), Positives = 177/320 (55%), Gaps = 24/320 (7%) Query: 28 IGMAIDDLRLERWQK-DRDIFVKKAESLGAKVFVQSANGNEET--QMSQIENMINRGVDV 84 IG+ + + + R++K DR F + L K V N +++ Q +Q E M+ G V Sbjct: 44 IGLLLPESKTARYEKFDRPYFEEAVAELCPKCEVSYQNADQDVSKQQAQAEAMLTEGASV 103 Query: 85 LVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVD-- 142 LV+ + + ++V++AK +G+ V+AYDR+ + +D+Y+SFDN+ VG +Q AL++ Sbjct: 104 LVLDAVDAKAAGSIVQQAKAQGVPVIAYDRLA-EGGVDYYVSFDNKTVGRVQGTALIEGM 162 Query: 143 ----IVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENAL 198 +G ++ GSP D NA F+AG ++L G++++ + W P+ A Sbjct: 163 EKAGTAGEGQVIMINGSPTDPNAADFKAGAHEIL-----DGQVEIGAEYDTPDWSPDKAQ 217 Query: 199 KIMENALTA-NNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAG 257 + ME A+TA + I V ++ND A G I AL A G+ I+GQDA+LAGI+RI +G Sbjct: 218 QQMEQAITAVGADNISGVYSANDGMAAGIIAALKAAGVDEMPPITGQDAELAGIQRIISG 277 Query: 258 TQTMTVYKPITLLANTAAEIAVEL-------GNGQEPKADTTLNNGLKDVPSRLLTPIDV 310 Q MTVYK I A AA +AV G+ + P + T G +P+ LL PI V Sbjct: 278 DQYMTVYKAIRPEAEVAAAMAVAAATGEKYEGSQEHPLTEVTDEAG-NTIPAVLLEPIAV 336 Query: 311 NKNNIKDTVIKDGFHKESEL 330 +NI+DTVI DGF+ E+ Sbjct: 337 TADNIEDTVISDGFYTIEEI 356 >UniRef50_D1PSG1 Sugar ABC transporter, periplasmic sugar-binding protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSG1_9FIRM Length = 398 Score = 171 bits (434), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 111/333 (33%), Positives = 174/333 (52%), Gaps = 32/333 (9%) Query: 27 KIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLV 86 K+G+++ LERW +D ++ + G + + ++ + Q+S I+NMI GVD+LV Sbjct: 56 KVGLSMPTQSLERWNRDGSYLDQQFKDAGYETVITYSDNDTNRQVSDIQNMIADGVDLLV 115 Query: 87 IIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVPQ 146 + +G+ L+ V+ EA + GI V+AYDR+I + + +Y+SFDN VG LQ + +VD + Sbjct: 116 VAAIDGEALNTVMNEAGEAGIPVIAYDRLIMNDNASYYVSFDNYTVGTLQGQYIVDTLDL 175 Query: 147 GNY---FLM---GGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQW------VDGWLP 194 N F M G P DNNA F G M VL+PY+DSGK+ VV Q W Sbjct: 176 DNAAGPFNMEITAGDPADNNATYFYQGAMDVLQPYIDSGKLVVVSGQTDFDTVATAQWDS 235 Query: 195 ENALKIMENALT---ANNNKIDAVVASNDATAGGAIQAL-SAQGLSGKVAISGQDADLAG 250 + A++ +N L A+ ++D + SND+TA G QA+ S S + I+GQD D A Sbjct: 236 QTAMERAQNVLASYYADGTQVDVWLCSNDSTALGVSQAIQSDYAGSNQPIITGQDGDEAN 295 Query: 251 IKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGL------------- 297 +K I G Q+MTVYK ++ A ++ + NG N+G Sbjct: 296 LKNIVDGLQSMTVYKAVSNEAVVTLDLGKAILNGDTIDESLITNSGWDFDCSYDTESYFT 355 Query: 298 ---KDVPSRLLTPIDVNKNNIKDTVIKDGFHKE 327 + PS LL P V K+N+ + ++ G++ + Sbjct: 356 SDGNNCPSFLLVPDVVTKDNMTEKLVDTGYYTQ 388 >UniRef50_D2B5R3 Putative sugar ABC transporter, substrate-binding protein n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B5R3_STRRD Length = 378 Score = 170 bits (430), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 114/323 (35%), Positives = 174/323 (53%), Gaps = 23/323 (7%) Query: 24 KEVKIGMAIDDLRLERWQK-DRDIFVKKAESLGAKVFVQSANGNEET--QMSQIENMINR 80 + KIG+ + + R R++K DR + L K V N ++ Q Q + M+N Sbjct: 48 RGFKIGLLLPESRTARYEKFDRPYITEHLAELCPKCQVVYGNAGDDPDRQRQQFDAMLNE 107 Query: 81 GVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKAL 140 V V+++ P + + ++ V A+ +G+KV+AYDR+ + ID Y SFDN +VG +Q +AL Sbjct: 108 NVKVIILDPVDARAIAQSVSNARSQGVKVVAYDRLAH-GPIDAYTSFDNIQVGRMQGQAL 166 Query: 141 VDIVP------QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQW-VDGWL 193 +D + +G ++ GSP D NA F+ G +L V +VG ++ GW Sbjct: 167 LDALKAGGDPGRGPIVMINGSPSDPNADDFKKGVHSILNGQV------IVGREYDTPGWS 220 Query: 194 PENALKIMENALTANNN-KIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIK 252 PE A A +I V A+ND AGG A+ G+ ++GQDA+LA I+ Sbjct: 221 PERAGTEAAAAFAELGAERIIGVYAANDGMAGGVALAMRNAGVRKGTPLTGQDAELAAIQ 280 Query: 253 RIAAGTQTMTVYKPITLLANTAAEIAVELGNGQ----EPKADTTLNNGL-KDVPSRLLTP 307 RI GTQTMTVYKPI A AA++AV+L +G+ T++NG +P++++ P Sbjct: 281 RILLGTQTMTVYKPIRPEAVNAAQLAVDLASGKPVTGSGSGSGTVDNGTSSSIPAQIIQP 340 Query: 308 IDVNKNNIKDTVIKDGFHKESEL 330 V +NIKDTV+KDGF E+ Sbjct: 341 TVVTWDNIKDTVVKDGFWTVQEI 363 >UniRef50_C7M0I9 Solute-binding protein n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M0I9_ACIFD Length = 404 Score = 170 bits (430), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 116/332 (34%), Positives = 171/332 (51%), Gaps = 20/332 (6%) Query: 16 LTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGA----KVFVQSANGNEETQM 71 L+++AA K + + D + R+ + F+ KA L + V++A G++ T++ Sbjct: 60 LSSLAAKGKGLVAAILPDTVSSARYTEFDAPFLTKAFQLAGLKSNQYIVENAQGSDATEL 119 Query: 72 SQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRM-INDADIDFYISFDNE 130 S ++ I+RG V++ P + V + K A Q G++V+ YDR+ + + D+Y+SF+N Sbjct: 120 SMAQSAISRGASVIIFDPLDSGVGVEIEKYAAQHGVRVINYDRLTLGSSPSDYYVSFNNV 179 Query: 131 KVGELQAKALVDIVP-----QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVG 185 +VG+L + V V N +M G+P DNNA LF G V+ PY SGK +VG Sbjct: 180 RVGQLIGQGFVACVAAWHVTHPNVLVMRGAPTDNNATLFAEGYDSVIDPYFKSGKWTLVG 239 Query: 186 DQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGK-VAISGQ 244 W P AL + TA+ N I+AVV ND A I L + ++ K + +GQ Sbjct: 240 TP-PGTWTPSVALTEFQQMYTAHPN-INAVVTPNDENAAPIISYLQSLHIAPKTIPFTGQ 297 Query: 245 DADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKD----- 299 DA L G++ I AG Q TVYKPI A A +A+ L G+ P A LN D Sbjct: 298 DATLQGLQNILAGYQCGTVYKPIYQEAQAAVSLALYLRAGKTPPA-ALLNGTTHDPVSGN 356 Query: 300 -VPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 +PS LLTP V N+ TVI D F S+L Sbjct: 357 NIPSVLLTPEWVTTKNMASTVIADNFVPASQL 388 >UniRef50_A5ZMP8 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZMP8_9FIRM Length = 376 Score = 169 bits (427), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 116/368 (31%), Positives = 188/368 (51%), Gaps = 44/368 (11%) Query: 4 KNILLTLCTSLLLTNVA-------AHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGA 56 K ++L + ++ +T+ A A A+ KIG+++ LERW +D ++ ++ G Sbjct: 3 KKLVLAMAATMAITSCAVPVLADDAAAEGGKIGISMPTQSLERWNRDGSYLEEQFKAAGY 62 Query: 57 KVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI 116 V + ++ + Q++ I+N+I+ GV++LVI +G+ L+ V+ EA GI V+AYDR+I Sbjct: 63 DVELTYSDNETDRQVNDIQNLISDGVNLLVIAAIDGEALNTVMDEAADAGIPVIAYDRLI 122 Query: 117 NDADIDFYISFDNEKVGELQAKALVDIV-------PQGNYFLMGGSPVDNNAKLFRAGQM 169 + +YISFDN VG LQ + ++D + N G P DNNA F G Sbjct: 123 KSDAVSYYISFDNYTVGTLQGQYVIDTLDLDNAGDKTYNIEFTAGDPADNNAGYFFNGAY 182 Query: 170 KVLKPYVDSGKIKVVGDQW------VDGWLPENALKIMENALT---ANNNKIDAVVASND 220 LKPY+D+G + VV Q W + AL+ M+N L A+ ++D + SND Sbjct: 183 DTLKPYLDAGTLNVVSGQTDFDSVATAAWDTQTALERMQNILASYYADGTQLDVALCSND 242 Query: 221 ATAGGAIQALSAQGLSGK--VAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIA 278 +TA G QA+ + +GK V I+GQD D A + I G Q+MTVYK + A ++A Sbjct: 243 STALGVTQAIESD-YAGKNDVLITGQDGDEANLANIVDGKQSMTVYKAVANEAVVTLDLA 301 Query: 279 VELGNGQEPKADTTLNNGLKD-----------------VPSRLLTPIDVNKNNIKDTVIK 321 + G + D+ + N D PS LL P V K+N+K+ ++ Sbjct: 302 EAMLKG-DTIDDSLITNSKWDFDCAYDTESYETSEGHKCPSFLLVPTVVTKDNMKEELVD 360 Query: 322 DGFHKESE 329 G++ + + Sbjct: 361 TGYYTQDD 368 >UniRef50_A6WFF0 Solute-binding protein n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6WFF0_KINRD Length = 362 Score = 169 bits (427), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 103/272 (37%), Positives = 151/272 (55%), Gaps = 12/272 (4%) Query: 58 VFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIN 117 V VQ+A ++ TQ +Q I G + +V++ +G ++V A + V+AYDR++ Sbjct: 74 VDVQTAE-DQATQNAQGVQAIRDGAEAVVVVALDGAAAGDLVSAANSADVPVVAYDRLLK 132 Query: 118 DADIDFYISFDNEKVGELQAKALVDIV----PQGNYFLMGGSPVDNNAKLFRAGQMKVLK 173 D+ ID+Y SFD VGEL +A++D + G ++ G P DNNA LF AG VL Sbjct: 133 DSAIDYYTSFDGGAVGELGGQAILDAIGTDTAGGAIVMLQGDPADNNAGLFAAGAHSVLD 192 Query: 174 PYVDSGKIKVVGDQWVDGWLPENALKIMENALTA-NNNKIDAVVASNDATAGGAIQALSA 232 GK+ V +++V GW + A M AL N ++ V + D A GA+QAL Sbjct: 193 -----GKVDVASERYVAGWSADQAAVEMRAALGELNGRRLLGVYTAYDGLAAGALQALDE 247 Query: 233 QGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTT 292 GLSG V I+GQDA+ A ++RI AGTQTMTVYK + A A++ ++ G+ P T Sbjct: 248 AGLSG-VPITGQDAETAALQRILAGTQTMTVYKDLPGQARATADLVADVLEGKTPATTGT 306 Query: 293 LNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGF 324 +NG VP+ LL P V K ++ V+ DG+ Sbjct: 307 TDNGAGAVPTVLLQPQAVGKAEVQSEVLADGY 338 >UniRef50_D2Q1K0 Xylose ABC transporter, substrate-binding protein n=77 Tax=Bacteria RepID=D2Q1K0_9ACTO Length = 379 Score = 169 bits (427), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 124/336 (36%), Positives = 181/336 (53%), Gaps = 29/336 (8%) Query: 24 KEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVD 83 +++ IG+++ ERW D +K E+ G +V +Q AN + TQ Q++ MI RG D Sbjct: 38 EDLTIGVSMPTQTSERWIADGKAVKEKLEAKGYQVDLQYANDDIPTQSQQVDQMITRGAD 97 Query: 84 VLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDA-DIDFYISFDNEKVGELQAKALVD 142 VL+I +G LS+ ++ A + I V+AYDR+I + +++FY+SFDN KVG QAKAL+ Sbjct: 98 VLIIAAIDGTALSSQLQAAADKSIPVVAYDRLIRGSKNVNFYVSFDNFKVGVAQAKALLR 157 Query: 143 IV----PQG---------NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSG----KIKVVG 185 + P G N L GS DNN + F G M+ LKPY D+G K K G Sbjct: 158 GLGLETPDGSKGSKTGPVNIELFAGSLDDNNTQYFFGGAMQTLKPYFDNGSLVVKSKQTG 217 Query: 186 DQWVDG--WLPENALKIMENALTANNN---KIDAVVASNDATAGGAIQALSAQGLSGKV- 239 + V W E A K ME+ LT++ N K+ V++ D + G I AL G Sbjct: 218 MEQVATLRWQQEAAQKRMEDLLTSSYNDGAKVGGVLSPYDGISRGIITALHNAGYGTPAN 277 Query: 240 ---AISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKA-DT-TLN 294 I+GQDA++A +K I G Q+ T++K LLA A A +EP+A DT T + Sbjct: 278 PTPVITGQDAEIASVKLIDTGVQSSTIFKDTRLLAEQAVNAAEAFLQKKEPEANDTKTYD 337 Query: 295 NGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 NG K VP+ LL V K +IK ++ G++ +E+ Sbjct: 338 NGTKVVPAYLLPIQTVFKEDIKKQLVDTGYYTAAEV 373 >UniRef50_A9B1C5 Solute-binding protein n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B1C5_HERA2 Length = 358 Score = 168 bits (425), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 118/324 (36%), Positives = 175/324 (54%), Gaps = 15/324 (4%) Query: 21 AHAKEVKI-GMAIDDLRLERWQK-DRDIFVKKAESLG--AKVFVQSANGNEETQMSQIEN 76 A A + KI + + + +R++ DR F ++ L +V +A N Q Q E Sbjct: 20 AEAPKAKIIALLLPEQTTKRYETVDRPWFEREMNLLCNDCQVLYYNAQNNPSLQQQQAEE 79 Query: 77 MINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI-NDADIDFYISFDNEKVGEL 135 I G VLV+ P + + A ++ I V+AYDR+I N + YISFDN+K+GEL Sbjct: 80 AIKAGARVLVLDPVDSVDARTIADHAAEQSIPVVAYDRLILNSPGVTAYISFDNQKIGEL 139 Query: 136 QAKALV-DIVPQG----NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVD 190 QA++L+ + +G L+ GS DNNA ++ G KV P V +GK+ ++G+ Sbjct: 140 QAESLIAGLAARGLSNPKILLLHGSLSDNNASEYKRGAKKVFDPLVAAGKLTIIGEFDTP 199 Query: 191 GWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAG 250 W P A + +E L A + +ID + A+ND TAGGA+ A+ A L I+GQDA+L Sbjct: 200 DWKPAEAQQYVERMLAAGD-QIDGIYAANDGTAGGALVAVQAAKLEPLPLITGQDAELTA 258 Query: 251 IKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKA----DTTLNNGLKDVPSRLLT 306 ++RI G Q MTVYK I A AA+IA L GQ + T+ NG+ +VP+ LL Sbjct: 259 VQRIITGEQHMTVYKAIRPQAEAAAKIAHALMVGQPIPTNLVNNRTVANGIMNVPAILLN 318 Query: 307 PIDVNKNNIKDTVIKDGFHKESEL 330 P+ V K +KDT++ D F +L Sbjct: 319 PVVVTKATVKDTIVSDNFWSPQQL 342 >UniRef50_C7MA39 Monosaccharide-binding protein n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MA39_BRAFD Length = 383 Score = 166 bits (421), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 126/342 (36%), Positives = 178/342 (52%), Gaps = 32/342 (9%) Query: 21 AHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINR 80 A E +G+A+ ERW D + + E G V +Q A+ + TQ QI+ MIN Sbjct: 37 APPSEQTVGVAMPTQTYERWVADGNNIKEGLEGKGFTVDMQYADDDIPTQQQQIDQMINS 96 Query: 81 GVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD-IDFYISFDNEKVGELQAKA 139 GV VL+I +G LS + A GI V+AYDR++ D++ +DFY++FDN KVG QA A Sbjct: 97 GVSVLLIASIDGASLSAQLDAAAAAGIPVVAYDRLLTDSENVDFYVTFDNYKVGVNQANA 156 Query: 140 LV-------------DIVPQG--NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVV 184 L+ D P+G N L GS DNNA LF G + L+PY D G ++V+ Sbjct: 157 LLYGLGLLDESFEPADDAPEGPLNVELFAGSLDDNNAHLFWDGAIDTLQPYFDDGTLEVL 216 Query: 185 GDQW------VDGWLPENALKIMENALTANNN---KIDAVVASNDATAGGAIQALSAQGL 235 Q W E A K ME LT + N ++ V+A D + G I AL GL Sbjct: 217 SGQMDIDQAATQRWEQETAQKRMETLLTTHYNGGEELAGVLAPADPLSRGIINALQNTGL 276 Query: 236 -----SGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKA- 289 G ++GQDA++A IK IA G Q T++K LA+ A A + G EP+A Sbjct: 277 GPTIDEGLPIVTGQDAEIASIKLIADGVQHSTIFKDTRDLADQAIVAAESILTGGEPEAN 336 Query: 290 DT-TLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 DT T +NG K VPS LL V ++N ++ ++ G++ E ++ Sbjct: 337 DTETYDNGAKVVPSYLLEVQMVLESNYEEILVDSGYYTEEQV 378 >UniRef50_B0PDL3 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDL3_9FIRM Length = 373 Score = 166 bits (421), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 114/344 (33%), Positives = 182/344 (52%), Gaps = 24/344 (6%) Query: 7 LLTLCTSLLLTNVAAHAK---------------EVKIGMAIDDLRLERWQKDRDIFVKKA 51 LL C S T+ AA A +KIG++ R++ D+ I +KA Sbjct: 32 LLAGCQSPAPTDTAASASTASLGDTQANQPEDGRIKIGVSFASEAQYRFKFDKQIMEQKA 91 Query: 52 ESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLA 111 E LGA + Q AN + Q +Q+EN+I++G+DVLV+ +G ++ N+V++ + +GI V+ Sbjct: 92 EELGADIIFQYANYDATKQANQVENLISQGIDVLVLNVVSGNMV-NLVEKVRSQGIPVIT 150 Query: 112 YDRMINDADIDFYISFDNEKVGELQAKALVDIV-PQG-NYFLMGGSPVDNNAKLFRAGQM 169 +D + A +D + DN KVG LQ +A ++ + P+G N L+ G P A+ G Sbjct: 151 FDNTVEGAQVDLNVDRDNVKVGRLQLEAALEYMGPEGGNVVLVKGDPGSAVAQRISQGYE 210 Query: 170 KVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQA 229 V + + + +V DQ+ + W P+ ALK +ENAL+ANN+ I A VAS D+ A G + A Sbjct: 211 AVAAEHPE---LNIVADQFHEAWSPDKALKTVENALSANNDDIQAFVASADSVALGIVPA 267 Query: 230 LSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKA 289 + A L GK + G D +++ K I G TM+++ I E AV+LG G+E Sbjct: 268 IKAAKLDGKAFLCGMDVEISAAKLINEGVMTMSIWTDIVSGDQRTIEAAVKLGKGEEITP 327 Query: 290 DTTLNNGLKDVPSRLLTPIDVNKNNIK---DTVIKDGFHKESEL 330 D G D+P L+ + V K+N++ D + G+ E E+ Sbjct: 328 DEIQQIGGFDIPVLLVDVMPVTKDNLRQWLDEIAPAGWATEEEI 371 >UniRef50_C7Q046 Solute-binding protein n=4 Tax=Actinomycetales RepID=C7Q046_CATAD Length = 361 Score = 166 bits (419), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 110/318 (34%), Positives = 171/318 (53%), Gaps = 20/318 (6%) Query: 25 EVKIGMAIDDLRLERWQK-DRDIFVK--KAESLGAKVFVQSANGNEETQMSQIENMINRG 81 V+IG+ + + + R++ D+ + +A G +V +A + Q +Q++ + +G Sbjct: 48 SVRIGILLPESKTTRYEAFDKPLLEAELQARMPGVQVDYYNAGQDATVQQTQVDTALTKG 107 Query: 82 VDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALV 141 VL++ + + + V++A G+KV+AYDR+ +D Y+SFDN KVGELQ AL+ Sbjct: 108 DKVLILDAVDSKSIQASVQKAHDAGVKVVAYDRLAQ-GPVDAYVSFDNVKVGELQGTALL 166 Query: 142 DIVPQG----NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENA 197 + ++ GSP D NA F+ G VL +GK+K+ + W P A Sbjct: 167 AALGSNAATQQIVMINGSPTDPNAAQFKQGAHSVL-----NGKVKIGKEYDTPNWDPNTA 221 Query: 198 LKIMENALTA-NNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAA 256 + M A+TA I V ++ND A G ALSA L V ++GQDA L ++RI A Sbjct: 222 NQEMAGAITALGAPNIHGVYSANDGMAAGIATALSAANL--HVPLTGQDAQLDALQRIQA 279 Query: 257 GTQTMTVYKPITLLANTAAEIAVELGNGQEPK----ADTTLNNGLKDVPSRLLTPIDVNK 312 GTQTMT+YKP A AA++AVE G+ P D + VPS+L+TPI V+K Sbjct: 280 GTQTMTIYKPYKPEATAAADVAVEFAQGRTPGNDLLPDKQTSGSGNVVPSKLITPIVVDK 339 Query: 313 NNIKDTVIKDGFHKESEL 330 N+ TV+KDG + +++ Sbjct: 340 TNMCTTVVKDGLYTAAQI 357 >UniRef50_C6PMK5 ABC transporter (Substrate-binding protein) n=6 Tax=Firmicutes RepID=C6PMK5_9CLOT Length = 366 Score = 165 bits (418), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 122/328 (37%), Positives = 178/328 (54%), Gaps = 27/328 (8%) Query: 28 IGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRG-VDVLV 86 IG+A+ L+RW +D + K+ E+ KV +Q AN + Q+ IENMIN+ V L+ Sbjct: 40 IGVAMPTQSLQRWNQDGENMKKQLEAKKYKVDLQYANNDVNAQVQSIENMINKKIVKFLL 99 Query: 87 IIPYNGQVLSNVVKEAKQEGIKVLAYDRMI-NDADIDFYISFDNEKVGELQAK------A 139 + P +L ++K+A GIKV+AYDR+I ++D+Y +FDN KVG +Q + Sbjct: 100 LHPLMVLLLQMLLKKASDNGIKVIAYDRLIMKSPNVDYYATFDNFKVGAIQGQYIEKKLG 159 Query: 140 LVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVD-------GW 192 L D N L GGSP DNNA F G M VL+PY+D+GK+ VVG + D GW Sbjct: 160 LKDGKGPFNIELFGGSPDDNNATFFYKGAMSVLQPYIDNGKL-VVGSKQKDFTTIAIQGW 218 Query: 193 LPENALKIMENALT---ANNNKIDAVVASNDATAGGAIQALSAQGLSGKVA-----ISGQ 244 A M+N +T A K+D +++ ND+ A G + AL G G A ++GQ Sbjct: 219 DSAKAQARMDNLITSTYAKGTKLDVILSPNDSLAIGIVAALKNAGY-GTAAKPYPVLTGQ 277 Query: 245 DADLAGIKRIAAGTQTMTVYKPITLLANTAAEI--AVELGNGQEPKADTTLNNGLKDVPS 302 D D + + Q+M+++K LAN E+ A+ G E T NNG K VPS Sbjct: 278 DCDKPNVLAMIHDQQSMSIFKDTRTLANKVVEMVDAIVQGKQAEVNDTKTYNNGSKVVPS 337 Query: 303 RLLTPIDVNKNNIKDTVIKDGFHKESEL 330 L PI +K+N K +++ G++KES+L Sbjct: 338 FLCDPIYADKDNYKKILVESGYYKESDL 365 >UniRef50_UPI0001BC53E3 D-xylose ABC transporter, periplasmic substrate-binding protein n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=UPI0001BC53E3 Length = 336 Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 98/334 (29%), Positives = 183/334 (54%), Gaps = 8/334 (2%) Query: 3 IKNILLTLCTSLLLTNV----AAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKV 58 +K ILL L + ++ A+ + KIG++ RW+++++ +A+ LG K+ Sbjct: 2 LKKILLYLGVMIFFISMIGCKQANKNKGKIGVSFGVGEAIRWKQEKEYMQNRADELGIKI 61 Query: 59 FVQ-SANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIN 117 ++ + +TQ +I+ +DVL+I P N +S ++K A+++ +KV++Y R+I Sbjct: 62 EIKLNTKDKPKTQEEDCFELIDSEIDVLIITPRNVNDMSKIIKYAEKKKVKVISYARIIL 121 Query: 118 DADIDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVD 177 +D Y+ +D++++G++ + L + V +GNY L+ G D NA L G ++ ++P Sbjct: 122 KEKVDLYVGYDSKRMGQMLGQYLAEKVYKGNYILLKGDENDENANLLYEGALRYIEPI-- 179 Query: 178 SGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSG 237 I V+ D + W P+ A +++ +A+ ANNNKIDA++A ND A G ++A+ ++ Sbjct: 180 KNDINVILDTSISNWSPKVAKELVTSAIKANNNKIDAILAPNDKIAEGCVEAIEELNINR 239 Query: 238 KVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGL 297 + I+G DA+L+ +KRI Q +T+Y + LA TA + A + + + + +N Sbjct: 240 NITITGMDAELSAVKRILNEKQDVTIYMDLKELAYTAIDEAFSMIHNKPISTNAEYDNQS 299 Query: 298 -KDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 K +PS L+T V K NI +I+ E+ Sbjct: 300 GKKIPSHLITGRLVTKQNIDRILIESKVFTREEI 333 >UniRef50_B5J4J1 Putative uncharacterized protein n=1 Tax=Octadecabacter antarcticus 307 RepID=B5J4J1_9RHOB Length = 353 Score = 161 bits (407), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 103/302 (34%), Positives = 169/302 (55%), Gaps = 10/302 (3%) Query: 4 KNILLT-LCTSLLLTNVAAHAKEVKIGMAIDDLRLERW-QKDRDIFVKKAESLGAKVFVQ 61 K +L T + TS LL A A+++ + + + + RW Q+D FV + ++ V+ Sbjct: 7 KGLLATSVATSALLGAGVASAEDM-VALLLPENVNPRWEQQDAAAFVATMARIAPEIKVE 65 Query: 62 SANGNEET--QMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDA 119 N N +T Q Q E + +G VL++IP +G+ + + A +EG+ +AYDRMIN Sbjct: 66 VFNANNDTSVQQRQAEQALTQGAKVLIVIPIDGESSAIIADTAAEEGVPTIAYDRMINSL 125 Query: 120 DIDFYISFDNEKVGELQAKALVDIVPQGNYFLM-GGSPVDNNAKLFRAGQMKVLKPYVDS 178 + F++ D E +G QA +++ G+ F+M GSP D NA + GQ++ L P +S Sbjct: 126 NTTFWVQADLEGMGYDQAMHIINNTRDGDTFVMLKGSPTDPNAAVIHNGQLRALTPLYES 185 Query: 179 GKIKVVG-DQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSG 237 G +V+G + W +GW P A + M+ ALT +N + VV+SND AG AI A+ QG++G Sbjct: 186 GA-RVMGYENWTEGWDPTIARRSMDQALTLLDNGVQGVVSSNDGNAGAAIAAMEEQGMAG 244 Query: 238 KVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPK--ADTTLNN 295 V +SG D + + + G QT ++P+ +A AA+++V L NG++ A T+ N Sbjct: 245 TVPVSGLDCTIQAQQLMLLGLQTQCGWRPLEDMAAAAAQVSVRLVNGEDFSDLAPQTVEN 304 Query: 296 GL 297 G+ Sbjct: 305 GV 306 >UniRef50_C7MZ66 Monosaccharide-binding protein n=1 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MZ66_SACVD Length = 376 Score = 161 bits (407), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 103/302 (34%), Positives = 164/302 (54%), Gaps = 11/302 (3%) Query: 39 RWQK-DRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSN 97 RW+ D+ + + + G + +Q+A G+ + + + MI +GV VL+I N ++ Sbjct: 61 RWEGFDKPMLEEALRAKGFEPDIQNAQGDVQKFSTLADGMIAQGVQVLIIASINSEIGGA 120 Query: 98 VVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIV---PQGNYFLMGG 154 V +AK GI + YDR+ ++Y+SFDN +VGELQ + L + + + G Sbjct: 121 VAAKAKSAGIPTIDYDRLNLGGSSEYYVSFDNVRVGELQGEGLAEALDGKSGAQVIEIEG 180 Query: 155 SPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDA 214 +P D+NA LF GQ VL+P DSG++++V Q +D W + ++ E LT+N ++D Sbjct: 181 APTDHNATLFHEGQRNVLQPLYDSGELELVRSQPIDDWNNQEGGRVFEQILTSNGGEVDG 240 Query: 215 VVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTA 274 VVA+ND A I L GL+GKV ++GQDA G++ I G Q MTV+KPI A Sbjct: 241 VVAANDGLASAVITVLKKYGLNGKVPVTGQDATAEGLRAILRGDQYMTVFKPIKEEAEAT 300 Query: 275 AEIAVELGNGQEPKADTTLNNGLKD------VPSRLLTPIDVNKNNIKDTVIKDGFHKES 328 AE+A L G + A+ + L+D V S LL P + ++ +K V+ +G+ Sbjct: 301 AELAAALVEGDKAAAEAVATDTLEDPKGKREVASVLLEPYLITRDEVK-RVVDEGYVSAD 359 Query: 329 EL 330 E+ Sbjct: 360 EI 361 >UniRef50_A8L0L2 Solute-binding protein n=5 Tax=Bacteria RepID=A8L0L2_FRASN Length = 385 Score = 161 bits (407), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 108/313 (34%), Positives = 177/313 (56%), Gaps = 15/313 (4%) Query: 28 IGMAIDDLRLERWQK-DRDIFVKKAESLG--AKVFVQSANGNEETQMSQIENMINRGVDV 84 I + + + + R++ DR F + + KV +A+ + Q +Q E + G V Sbjct: 63 IALLLPETQTTRYESADRPYFEARMAKICPDCKVLYSNADQDSAAQQNQAEQAMTNGAKV 122 Query: 85 LVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIV 144 LV+ P +G+ + + + A+ G++V++YDR+I A +D YISFDNEKVG+LQ +AL+D + Sbjct: 123 LVLDPVDGEAAAVIARNARDRGVRVVSYDRLIQKAPVDAYISFDNEKVGQLQGQALLDAI 182 Query: 145 PQ----GNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKI 200 G ++ GS D NA+ F+ G + VL+ GK+ + D + W P+ A + Sbjct: 183 GDRAGAGKVIMINGSQDDPNAQQFKDGALSVLE-----GKVTIGFDTFTPDWSPDTAGRE 237 Query: 201 MENALTA-NNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQ 259 M+ A+T I V A+ND AG + AL ++ ++GQDA+LAG++R+ AG Q Sbjct: 238 MDQAITTVGRENIVGVYAANDGMAGAVVAALRRANVNPLPPVTGQDAELAGVQRVLAGDQ 297 Query: 260 TMTVYKPITLLANTAAEIAVELGNGQ--EPKADTTLNNGLKDVPSRLLTPIDVNKNNIKD 317 MTVYK I A AA++A+ L G+ + A ++NG VP+ LL P+ V ++ + Sbjct: 298 HMTVYKAIRPEAEQAADLALALLRGEPVDTIATGHVDNGNGQVPAVLLEPVAVTRDTVAA 357 Query: 318 TVIKDGFHKESEL 330 TV+KDGF +++L Sbjct: 358 TVVKDGFIAKADL 370 >UniRef50_A6X2R7 Periplasmic binding protein/LacI transcriptional regulator n=53 Tax=Bacteria RepID=A6X2R7_OCHA4 Length = 351 Score = 160 bits (405), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 113/333 (33%), Positives = 176/333 (52%), Gaps = 23/333 (6%) Query: 3 IKNIL-----LTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQ-KDRDIFVKKAESL-- 54 +KNIL + S N A K+ +G + D R++ +D F + + + Sbjct: 1 MKNILGKAAFAAVVLSSFAGNAQAEVKDAVVGFLMPDQASTRYEERDYPGFAAEMKKICE 60 Query: 55 GAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDR 114 KV +A+G+ Q Q ++I++G V+V+ + +++VK A+ + IKV+AYDR Sbjct: 61 SCKVLYLNADGDASKQQQQFNSVISQGAKVIVLDAVDTAAAASLVKLAQSQDIKVIAYDR 120 Query: 115 MINDADIDFYISFDNEKVGELQAKALVDIVP-------QGNYFLMGGSPVDNNAKLFRAG 167 I DA DFY+SFDNE +G+ A++LV + +G + GSP D A L + G Sbjct: 121 PIPDATSDFYVSFDNEAIGKSIAESLVKHLKDKGVAGDKGGVLQINGSPTDAAAGLIKNG 180 Query: 168 QMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAI 227 LK DSG K + + W P A + +T N++I VVA+ND TAGGAI Sbjct: 181 IHAGLK---DSG-YKTLAEYDTPEWAPSKAQQWASGQITRFNDQIVGVVAANDGTAGGAI 236 Query: 228 QALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEP 287 A+ A G+ ++G DA +A ++ I +G Q T+ KP ++A AA +A +L NG+ P Sbjct: 237 AAMKAAGIDPLPPVTGNDATIAALQLIISGDQYNTINKPSEIVAAEAARVAGQLLNGETP 296 Query: 288 KADTTLNNGLKDVPSRLLTPIDVNKNNIKDTVI 320 KA+ TL N PS+L P+ V +N+K +I Sbjct: 297 KAEATLYN----TPSKLFVPVVVTADNLKAEII 325 >UniRef50_B8HEQ4 Multiple sugar-binding periplasmic receptor n=8 Tax=Micrococcineae RepID=B8HEQ4_ARTCA Length = 365 Score = 160 bits (404), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 109/312 (34%), Positives = 163/312 (52%), Gaps = 18/312 (5%) Query: 28 IGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVI 87 IG+A+ E W +F G K VQ ANG Q +QI M+ +G V+++ Sbjct: 47 IGVALPQKTSENWVLAEKLFNDGLNGAGFKADVQFANGGVSEQQNQISAMVTKGAKVIIV 106 Query: 88 IPYNGQVLSNVVKEAKQEGIKVLAYDR-MINDADIDFYISFDNEKVGELQAKALVDIV-- 144 +G L +K+AK G ++AYDR ++N ++D+Y+++DN KVGELQ +AL+D + Sbjct: 107 GAIDGSQLGTQLKQAKDAGATIIAYDRLLLNTENVDYYVAYDNFKVGELQGQALLDGLKA 166 Query: 145 --PQGNY--FLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQW------VDGWLP 194 P G Y L GSP D NAK+F G M VLKP +D G +KV+ Q GW Sbjct: 167 KKPNGPYNIELFAGSPDDANAKVFFDGAMSVLKPKIDDGTLKVLSGQTNFEQAVTQGWKA 226 Query: 195 ENALKIMENALTANNN--KIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIK 252 ENA + + LT + + +D V++ ND A + ++ A G V ++GQD+++ +K Sbjct: 227 ENAQRRADTLLTGSYSSASLDGVLSPNDTLARAVLTSVKAAGKPLPV-VTGQDSEVESVK 285 Query: 253 RIAAGTQTMTVYKPITLLANTAAEIAVELGNGQ--EPKADTTLNNGLKDVPSRLLTPIDV 310 I AG Q T+ K L A + +L G+ E + NNG+K VP+ LL P+ V Sbjct: 286 SIMAGEQYSTINKDTRKLVEHAITMVKDLQAGKDLEINDKDSYNNGVKTVPAYLLEPVIV 345 Query: 311 NKNNIKDTVIKD 322 N+K D Sbjct: 346 TAANVKTAYTDD 357 >UniRef50_UPI00018512F8 xylose binding protein transport system n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI00018512F8 Length = 227 Score = 159 bits (402), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 69/149 (46%), Positives = 109/149 (73%) Query: 26 VKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVL 85 +KIG ++D L ERW++DR F + E+LGA+V +Q++NG++ Q+SQ E++I G+DVL Sbjct: 53 MKIGFSMDTLLEERWERDRTYFKEAVEALGAEVDIQTSNGDDALQISQAESLIRSGIDVL 112 Query: 86 VIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVP 145 VI+P+N + + +VK+A G+KVLAYDR++ +A+ID Y+S+DNE+VG LQA+A+ + P Sbjct: 113 VIVPHNAESTAIIVKKAHSAGVKVLAYDRLVKNAEIDLYVSYDNEQVGRLQAEAIASVAP 172 Query: 146 QGNYFLMGGSPVDNNAKLFRAGQMKVLKP 174 +G Y +GG+ D+NA L + G + L P Sbjct: 173 KGKYVYIGGAETDHNAHLTKKGSTEFLNP 201 >UniRef50_D1BVH2 Xylose ABC transporter, substrate-binding protein n=3 Tax=Actinomycetales RepID=D1BVH2_XYLCX Length = 388 Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 111/341 (32%), Positives = 178/341 (52%), Gaps = 31/341 (9%) Query: 21 AHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINR 80 A A ++ +G+A+ ERW D + + E G +V +Q AN + TQ QI+ MI + Sbjct: 43 AAASDITVGVAMPTQTSERWIADGNSVREGLEEAGFEVNLQFANDDIPTQQQQIDQMITQ 102 Query: 81 GVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD-IDFYISFDNEKVGELQAKA 139 G D+L++ +G L+N ++ A GI +++YDR+I D + +DFY++FDN +VG QA + Sbjct: 103 GADILIVASIDGTALANQLQAAADAGIPIISYDRLIRDTENVDFYVTFDNFQVGVDQATS 162 Query: 140 LVD----IVPQGNYF---------LMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKV-VG 185 L+ + GN L GS DNNA F G M L+P++D+G + V G Sbjct: 163 LLTGLGVLDADGNETGETGPFTIELFAGSLDDNNAHFFFDGAMTTLQPFIDAGTLVVGSG 222 Query: 186 DQWVDG-----WLPENALKIMENALTAN----NNKIDAVVASNDATAGGAIQALSAQGLS 236 +D W E A + ME+ LTA+ + + V++ D + G I AL G+ Sbjct: 223 QTSIDQAATLRWSQETAQRRMEDLLTAHYGGGSEPLHGVLSPFDGISRGIITALQNAGMG 282 Query: 237 GKVA-----ISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADT 291 +A ++GQDA++A + I G Q T++K LLA A A +G+ P+A+ Sbjct: 283 PSIADGLPVVTGQDAEIASVALIDQGIQYSTIFKDTRLLAEQAVIAAQAFADGRTPEANN 342 Query: 292 T--LNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 T +NG+ VPS LL V ++I+ +I GF + ++ Sbjct: 343 TTDYDNGMMIVPSFLLPVSIVTADDIQSVLIDSGFFTQEQV 383 >UniRef50_C3X7Z9 D-xylose ABC transporter n=1 Tax=Oxalobacter formigenes OXCC13 RepID=C3X7Z9_OXAFO Length = 333 Score = 152 bits (383), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 89/311 (28%), Positives = 161/311 (51%), Gaps = 2/311 (0%) Query: 22 HAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQ-SANGNEETQMSQIENMINR 80 +A + K+G++ +RW + ++ V++A+ LG V + + +TQ +MI+ Sbjct: 20 NATKPKLGISFGVGPAKRWPVEMNLMVERAKELGMDVDARLNKTDTPKTQTEDCIDMIDN 79 Query: 81 GVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKAL 140 G+ L+++P + ++ A+++ +KVL Y R I ++DF++ +D K+G+ L Sbjct: 80 GISTLILVPRDANKTDEILDYARKKNVKVLLYARTILGKNLDFFVGYDTYKIGQSLGSHL 139 Query: 141 VDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKI 200 + +G+ ++ G D N L G MK +P V+ G + ++ D+++DGW PE A K Sbjct: 140 SEKTYKGSVAILKGDANDFNVPLLNDGAMKYFQPLVEQGDLTIILDEYIDGWNPEIARKK 199 Query: 201 MENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQT 260 + A+ NN+++DA+ A ND AG A + + G+ V I G DA+L IKR+ GTQ Sbjct: 200 LTAAIKKNNHQVDAIFAHNDIMAGVAAEVVKELGIKNHVVIVGMDAELPAIKRLVNGTQD 259 Query: 261 MTVYKPITLLANTAAEIAVELGNGQEPKADTTLNN-GLKDVPSRLLTPIDVNKNNIKDTV 319 TVY + +A TAA A L + + +N + + L+ + + NI + Sbjct: 260 ATVYMDLKAMAVTAANEAYNLATNKPTNVNAAFDNKSASTIKAYLVNGKIITRENIDRQL 319 Query: 320 IKDGFHKESEL 330 I G + E+ Sbjct: 320 IDTGVYTREEV 330 >UniRef50_D1BCK3 Multiple monosaccharide-binding protein n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BCK3_SANKS Length = 376 Score = 151 bits (381), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 104/342 (30%), Positives = 175/342 (51%), Gaps = 32/342 (9%) Query: 20 AAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMIN 79 AA A +G+A+ RW +D D + E+LG +V +Q A + TQ+ Q+++MI+ Sbjct: 35 AAGADGSLVGVAMPTTTSLRWIEDGDNLKAQLEALGYQVDLQYAENDVPTQVDQLQSMID 94 Query: 80 RGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDA-DIDFYISFDNEKVGELQAK 138 G D+LV+ +G L++ + +A GI V+AYDR+I ++ D+D+Y +FDN +VG QA Sbjct: 95 AGADLLVVGSIDGTALTDQLAQAADAGIPVIAYDRLIRESPDVDYYATFDNFRVGTQQAT 154 Query: 139 ALVDIV-----------PQGNYF--LMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVG 185 +L+ + +G Y + GS DNNA +F G VL+PY+DSG ++V Sbjct: 155 SLLQGLGVLDEAGEPTGEEGPYTVEVFAGSSDDNNATVFYEGAFSVLQPYLDSGVLEVPS 214 Query: 186 DQW------VDGWLP----ENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGL 235 + ++ W E +++++ + + ID V++ D + I L G Sbjct: 215 GETDFATIAIEAWDAKVGGERMTRLLDSVYSGTDLVIDGVLSPYDGISIAIIDVLKGAGY 274 Query: 236 SGKVA-----ISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKAD 290 G A + GQDA+ IK + AG Q ++YK LA + L G P+ + Sbjct: 275 -GTAARPLPVVVGQDAEAPSIKSVIAGEQYSSIYKDTRQLAEVTVAMGDALLKGTAPEVN 333 Query: 291 --TTLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 T+ +NG+ VP+ LL P+ V N + ++ G++ E +L Sbjct: 334 DVTSYDNGVTTVPTYLLAPVVVTATNYESLLVGGGYYTEEDL 375 >UniRef50_C7QF49 Solute-binding protein n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QF49_CATAD Length = 386 Score = 150 bits (380), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 104/316 (32%), Positives = 163/316 (51%), Gaps = 13/316 (4%) Query: 24 KEVKIGMAIDDLRLE-RW-QKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRG 81 K K+G+ + D RW D D + G +Q++NG+ T SQ ++M+N G Sbjct: 60 KNNKVGILLPDTNSSPRWVNSDPDELKTQCAQYGLTCDIQNSNGSATTMTSQAQSMLNEG 119 Query: 82 VDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALV 141 V VL++ + + +A+ +G+ + YDR+ +Y+SFDN VG+ Q AL Sbjct: 120 VGVLMLTNLDSGSAKAIEAQAQAKGVVTIDYDRLTLGGTAQYYVSFDNVAVGKAQGTALT 179 Query: 142 DIVPQGN-----YFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPEN 196 Y G+ DNNA LF+ G VLK +G + GDQ + P Sbjct: 180 KCTQVAGKTAVKYVEEDGAATDNNATLFKQGYDSVLK--AQTGWTQA-GDQSGNWDNPAG 236 Query: 197 ALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAA 256 + + L ++AV+ +ND A AI L QGL+GKVA+SGQDA G++ I Sbjct: 237 TAQSVFQKLLQGAPDLNAVMVANDEMANAAITVLKQQGLNGKVAVSGQDATATGLQNILN 296 Query: 257 GTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNN--GLKDVPSRLLTPIDVNKNN 314 G Q T+YKP+ A+ A ++A ++ +GQ+P A +++ G +DVPS L TP+ V+K+N Sbjct: 297 GDQCFTIYKPVKGEADVAVKLASQVLSGQKPTAPAVVHDPTGNRDVPSYLATPVVVDKSN 356 Query: 315 IKDTVIKDGFHKESEL 330 I DG+ K +++ Sbjct: 357 IT-LPFTDGYQKAADV 371 >UniRef50_A0LTZ4 Solute-binding protein n=17 Tax=Actinomycetales RepID=A0LTZ4_ACIC1 Length = 390 Score = 150 bits (378), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 104/298 (34%), Positives = 157/298 (52%), Gaps = 21/298 (7%) Query: 39 RWQ-KDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSN 97 RW+ +DR K ++ G K +Q+A G++ ++MI GV VL+I+ + + Sbjct: 72 RWESQDRPNLQKAFQAAGIKADIQNALGDKNKFAQIADSMIQEGVKVLIIVDLDSPSGAA 131 Query: 98 VVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVPQG---------- 147 V +A Q GIK + YDR+ +Y+SFDN +VG+L + LVD + Sbjct: 132 VEAKAAQAGIKTIDYDRLTLGGSASYYVSFDNVQVGKLMGQGLVDCLKDKAASATTSNPV 191 Query: 148 NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTA 207 + GSP DNNA LF+ G VL P +GK K VGDQ V W A I + LTA Sbjct: 192 RIIEINGSPTDNNATLFKQGYDSVLDPLYATGKWKKVGDQSVPNWDNAQAGTIFQQLLTA 251 Query: 208 NNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPI 267 K+D V+ +ND A I +QGL K ++GQDA + G++ + G Q TV+K Sbjct: 252 AGGKVDGVLVANDGMAQSVITVEKSQGL--KAPVTGQDATVPGLQSVLRGDQCGTVFKNT 309 Query: 268 TLLANTAAEIAVELGNGQEPKADTTLN------NGLKDVPSRLLTPIDVNKNNIKDTV 319 +L A+ AA++A++L G++P + +N G +DVPS L TP + + ++D V Sbjct: 310 SLEASAAAQLAIDLIQGKDPG--SLINGKVHDPQGNRDVPSALQTPEWITADKVEDVV 365 >UniRef50_C0CY30 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CY30_9CLOT Length = 392 Score = 147 bits (372), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 96/324 (29%), Positives = 167/324 (51%), Gaps = 21/324 (6%) Query: 28 IGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVI 87 IG+++ ERW +D + + + G +V +Q A+ E Q+ QIENMI +G VL++ Sbjct: 65 IGVSLTSRSAERWLRDGNTLNEDLTAAGYQVDLQYADSKPEMQVQQIENMILKGCKVLIV 124 Query: 88 IPYNGQVLSNVVKEAKQEGIKVLAYDR-MINDADIDFYISFDNEKVGELQAKALVDIV-- 144 P + LS+V+ AK+ GI V+ YD ++ +DID+++ FDN KVG +QA+A+++ + Sbjct: 125 APVDNSALSSVLATAKENGIVVINYDLGIVGSSDIDYFVGFDNSKVGTMQAEAIIEKLGL 184 Query: 145 ---PQGNYF--LMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQ------WVDGWL 193 +G ++ L+ GS + N ++ G M+ KPY+D+GK+ V Q V W Sbjct: 185 DKGEEGPFYIELVAGSLAEANCYMYFEGAMEAFKPYMDAGKLVVKSGQTSIEQCTVVDWK 244 Query: 194 PENALKIMENALT---ANNNKIDAVVASNDATAGGAIQALSAQGLSGK----VAISGQDA 246 E ++N LT ++ +DAV++ +D +G L + G I+G DA Sbjct: 245 LELLTARLDNLLTTYYSDGTLLDAVLSPSDYLSGPIATRLESFGYGSADMPMPVITGNDA 304 Query: 247 DLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLT 306 + K IA M+V+K LL+ +I L G+EP+ + ++P+ + Sbjct: 305 TESVCKMIATDEVYMSVFKDTRLLSGACLDIINALAEGREPEVTDVYTPDVYEIPTIFVP 364 Query: 307 PIDVNKNNIKDTVIKDGFHKESEL 330 + K N+K+ V+ G E ++ Sbjct: 365 MESITKENLKEVVVDSGIFTEEQI 388 >UniRef50_B3DR21 ABC-type xylose transport system periplasmic component n=8 Tax=Bifidobacteriaceae RepID=B3DR21_BIFLD Length = 385 Score = 146 bits (369), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 109/331 (32%), Positives = 163/331 (49%), Gaps = 35/331 (10%) Query: 24 KEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVD 83 K IG+++ ERW KD + K E G KV + A+ Q + IENM+N Sbjct: 40 KGATIGISMPTKSEERWNKDGNNLKAKLEKAGYKVILSFADDKPAQQNADIENMVNNDAK 99 Query: 84 VLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD-IDFYISFDNEKVGELQAKALVD 142 ++V+ +G + V++A+ G KV+AYDR+I + D +D+Y +F E+VG L+A L+D Sbjct: 100 IVVVASKDGTAVGPAVEKARDAGAKVIAYDRLIMNTDAVDYYATFQLEQVGVLEATWLID 159 Query: 143 IVP-------QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKI-------------K 182 + N L GSP DNNAK F G +L+PY + G + Sbjct: 160 QLKLKDGATGPFNIELFTGSPDDNNAKYFFKGAWDLLQPYFEKGVLVSPSQHGQGGVTKD 219 Query: 183 VVGDQW----VDGWLPENALKIMENAL---TANNNKIDAVVASNDATAGGAIQALSAQ-- 233 + W V W E A K ME+ L A+ K+DAV+ D A G I A+ ++ Sbjct: 220 FTVEDWQKISVMSWKTEQAQKDMESILDSTYAHGEKLDAVLTPYDGIAQGVINAIESKRP 279 Query: 234 ----GLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKA 289 G I+GQDA + IA Q TV+K + LA+ ++ VE+ G+E Sbjct: 280 DMKPGTDSWPYITGQDAMEIAVANIAKDKQGETVFKDVNKLADAVYDMVVEIAEGKEVSG 339 Query: 290 -DTTLNNGLKDVPSRLLTPIDVNKNNIKDTV 319 + NN DVPS+LL P ++ K+N++D V Sbjct: 340 LNGKFNNNNIDVPSKLLDPQNITKDNLQDLV 370 >UniRef50_A9WDY0 Periplasmic sugar-binding protein n=15 Tax=Bacteria RepID=A9WDY0_CHLAA Length = 387 Score = 143 bits (361), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 102/337 (30%), Positives = 171/337 (50%), Gaps = 32/337 (9%) Query: 24 KEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVD 83 +++ +G+ + RW +D F + + G +V + + G+ + +E +I +G+ Sbjct: 49 QQLAVGIVLPTKDEPRWIQDETRFREALQQAGYQVEILFSQGSSAKEKENVEALIAKGIK 108 Query: 84 VLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD-IDFYISFDNEKVGELQAKALVD 142 VL+I P++G + + A+ G+KV++YDR+I + D +D+Y++FD+ VG QA+ LVD Sbjct: 109 VLIICPHDGTAAAAAAEAARAAGVKVISYDRLIRETDAVDYYVTFDSIAVGAQQAQYLVD 168 Query: 143 IVP-QGN-YFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKI------------------- 181 GN +L G+ DNNA LF G KVL+P + G Sbjct: 169 HASGTGNPLYLYAGAASDNNAFLFFEGAWKVLQPKIADGTFVIKNSSEAVALQNKLDLTR 228 Query: 182 ----KVVGDQWVDGWLPENALKIMENALTA----NNNKIDAVVASNDATAGGAIQALSAQ 233 K++G Q W A + E LTA + K+ ++A ND TA A +A Sbjct: 229 DEMAKIIG-QVTTNWDFNTAKNLAEANLTAATAADKGKV-YILAPNDGTARAIADAFAAD 286 Query: 234 GLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTL 293 + ++GQDA+ A ++ I G Q+MTV+K + L A + AV L Q+P+A T Sbjct: 287 KDVTEYFVTGQDAEKASVQYIIDGRQSMTVFKDVRTLVQDAIKAAVALLQDQQPEARGTY 346 Query: 294 NNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 NNG KDVP+ + V ++N++ +I G++ S+ Sbjct: 347 NNGKKDVPAIQSPVVTVTRDNVRAALIDSGYYSASDF 383 >UniRef50_C6WNS7 Monosaccharide-transporting ATPase n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WNS7_ACTMD Length = 364 Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 105/302 (34%), Positives = 165/302 (54%), Gaps = 11/302 (3%) Query: 39 RWQ-KDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSN 97 RW+ +DR + E+ G + V++A +E S +++I RGV VL+I P + + Sbjct: 47 RWEEQDRPQLQRALEAEGLEPVVENARNDEFRFASIADDLIARGVAVLLITPLTPEGGAT 106 Query: 98 VVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIV--PQGNYFL-MGG 154 V +A++ GI V+ YDR D+ +SFDNE VGELQA+ LVD + +G + + G Sbjct: 107 VEHKARKAGIPVIDYDRFSVGGAADYLVSFDNEAVGELQARGLVDCMGDRRGARVIELQG 166 Query: 155 SPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDA 214 +P DNNA F GQ +VL P + G ++V D W P E AL + ++D Sbjct: 167 APQDNNAMQFADGQRRVLGPRYERGDYRLVASTSADRWDPLLGRARFEQALNDSGGRVDG 226 Query: 215 VVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTA 274 V+A+ND A AIQ L A+GL+GKV ++GQDA + G++ + G Q +TV+K I A A Sbjct: 227 VLAANDRLAAAAIQVLRARGLAGKVPVTGQDATVDGLRAVLRGEQCLTVHKSIRDEAEAA 286 Query: 275 AEIAVELGNGQEPKADTTLNNGLKD------VPSRLLTPIDVNKNNIKDTVIKDGFHKES 328 A +A L +G +AD + +D V + LL + V+++ ++ ++ G + Sbjct: 287 ARLASALADGDVARADALASATTEDPTNGRRVRAVLLGAVPVHRDGVR-VLVASGVVRAE 345 Query: 329 EL 330 EL Sbjct: 346 EL 347 >UniRef50_C9Z5F4 Putative lipoprotein n=2 Tax=Streptomyces RepID=C9Z5F4_STRSW Length = 343 Score = 141 bits (355), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 104/314 (33%), Positives = 167/314 (53%), Gaps = 19/314 (6%) Query: 25 EVKIGMAIDDLRLERWQKDRDIFVKK--AESLGAKVFVQSANG--NEETQMSQIENMINR 80 ++ +G+ D +R+++ +KK AE K + AN + ETQ Q++ M+ Sbjct: 16 DITVGVLFPDKDTKRYEQFDYPNIKKKIAELTDNKGITKYANAEKDPETQTGQMKQMVED 75 Query: 81 GVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKAL 140 VD++++ + + ++ V+ A GI V+AYDR+ ID Y+SFDNE VG++Q ++L Sbjct: 76 KVDIIIVDAVDSKAIAPAVQSAHDAGIPVIAYDRLAQ-GPIDGYVSFDNELVGQVQGRSL 134 Query: 141 VDIVPQG---NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENA 197 V+ + +M GSP D NA +F+ G + L+ K+ + W P A Sbjct: 135 VEDLGDSAANKIVMMNGSPTDPNAAMFKEGALSELQ-----DKVTISETFDTKDWDPVVA 189 Query: 198 LKIMENALTA-NNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAA 256 ME A++ + IDAV A+ND AG I L G++ ++GQDADL ++RI Sbjct: 190 KANMEKAVSKLGVDNIDAVYAANDGIAGAVIDVLKTAGVAKVPPVTGQDADLDAVQRILT 249 Query: 257 GTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGL-----KDVPSRLLTPIDVN 311 G Q MTVYK A AAE+AV G+ + D + + K +P++L+ P+ + Sbjct: 250 GDQYMTVYKSFPTQAAAAAEMAVAKVQGRSIEFDALAKDSIDSPTTKKIPAQLVPPVALT 309 Query: 312 KNNIKDTVIKDGFH 325 K+NIKDTV+ DG + Sbjct: 310 KSNIKDTVVADGIY 323 >UniRef50_C1RM32 Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=2 Tax=Micrococcineae RepID=C1RM32_9CELL Length = 364 Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 96/311 (30%), Positives = 152/311 (48%), Gaps = 17/311 (5%) Query: 28 IGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVI 87 IG+++ L + W + +++F + G + VQ+A+ Q QIE MI RG +V+V+ Sbjct: 47 IGVSLPWLGTQNWAEAQEMFTTRLTEAGFEPLVQAADNKVTQQQQQIEAMIERGAEVIVV 106 Query: 88 IPYNGQVLSNVVKEAKQEGIKVLAYDRMI-NDADIDFYISFDNEKVGELQAKALVDIV-- 144 P +G L +V++ A EGI V+ YDR+I N +D + F + + GELQ ++L+D + Sbjct: 107 GPVDGTQLGSVLERAAAEGIAVIGYDRLIENTPAVDAVVQFGSLRTGELQGQSLLDGLAA 166 Query: 145 ----PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQW------VDGWLP 194 P + L GG P D NA F G M VL+P +D G + V Q W Sbjct: 167 RKGEPPYHVELFGGGPADPNAPAFFEGAMSVLQPKIDDGTLVVGSGQTEFTQAATPDWDN 226 Query: 195 ENALKIMENALTA--NNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIK 252 A M++ L+ + +ID V++ ND A + + G V ++G DA+ + Sbjct: 227 AKAQARMDSLLSGFYSAEEIDGVLSPNDGIARAVMTSAQQAGQETPV-VTGLDAENESVV 285 Query: 253 RIAAGTQTMTVYKPITLLANTAAEIAVELGNGQE-PKADTTLNNGLKDVPSRLLTPIDVN 311 + G Q TV KP L E+ L G+ P+ D ++NG DV LL P+ V Sbjct: 286 SVWQGQQWSTVAKPTVELVGRTVELIQSLQQGEALPEPDEEVDNGQTDVAVYLLDPLVVT 345 Query: 312 KNNIKDTVIKD 322 + N ++ D Sbjct: 346 QENAQEVFADD 356 >UniRef50_B9JL62 Sugar ABC transporter n=7 Tax=Bacteria RepID=B9JL62_AGRRK Length = 361 Score = 134 bits (337), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 97/273 (35%), Positives = 147/273 (53%), Gaps = 15/273 (5%) Query: 55 GAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDR 114 G KV Q+ANG+ Q Q ++I++G +V+ P + +++VK A+ +G+KV+AYDR Sbjct: 66 GCKVIYQNANGDASRQQQQFNSVISQGAKAIVLDPVDSTAAASLVKLAQSQGVKVIAYDR 125 Query: 115 MINDADIDFYISFDNEKVGELQAKALVDIVPQ-------GNYFLMGGSPVDNNAKLFRAG 167 I D+Y+SF+NE++G+ AK+LVD + G + GSP D A L + G Sbjct: 126 PIPSVPADYYVSFNNEEIGKAIAKSLVDHLKSKGVKAGDGGLLEINGSPTDAAAGLIKKG 185 Query: 168 QMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAI 227 L G V+ + W P A + +T KI VVA+ND T G A+ Sbjct: 186 IHAGLA----DGGYPVLAEFDTPDWAPPKAQQWASGQITRFGKKILGVVAANDGTGGAAV 241 Query: 228 QALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEP 287 A A G+ ++G DA +AG++ I AG Q T+ KP ++A AA +A++L +G+ P Sbjct: 242 AAFKAAGVDPVPPVTGNDATIAGLQLIIAGDQYNTISKPSEIVAAAAANVAIQLLSGETP 301 Query: 288 KADTTLNNGLKDVPSRLLTPIDVNKNNIKDTVI 320 KADT L D P++L TP V N+K +I Sbjct: 302 KADTKLF----DTPTQLFTPALVTAENLKAEII 330 >UniRef50_B1Y1T3 ABC sugar transporter, periplasmic solute-binding protein n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y1T3_LEPCP Length = 355 Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 94/329 (28%), Positives = 162/329 (49%), Gaps = 13/329 (3%) Query: 4 KNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQ-KDRDIFVK--KAESLGAKVFV 60 ++IL L S+L + + E K+ + + R++ +D F+ K ++ AKV V Sbjct: 3 QHILGALAASILASTATSAMAEDKVFFLLPNATTIRFESRDAPFFIDALKKKAPQAKVIV 62 Query: 61 QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD 120 Q+A G+ Q +E+ I++G V+V + + + + A + V+ YD Sbjct: 63 QNAQGDPSRQQRLVEDAISQGAKVIVYTSADANLSAGSLAAAAAAKVPVVLYDHDAVGGK 122 Query: 121 IDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNN-----AKLFRAGQMKVLKPY 175 D ++ FD+ VG+ Q K +++ + N ++ + + N + AGQ + LKP Sbjct: 123 ADAHVVFDSLSVGQAQGKRAAELISKINKPVVKVARIKGNQGEYGTGQYEAGQNEFLKPL 182 Query: 176 VDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGL 235 + SGK+KVV +Q+ + W P A E+ LT N +D + ND T GG++ AL +QG Sbjct: 183 IASGKVKVVCEQYTENWDPVKAQSFAEDCLTRNKGDVDVFLGMNDGTTGGSVAALISQGY 242 Query: 236 SG--KVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQE-PK--AD 290 K+ GQDA + ++ IA G Q +V K + + A AA++ L G+ PK + Sbjct: 243 KPGQKLVTGGQDATVEALRYIAMGWQDNSVLKDLKVEATYAADVVASLLGGKGVPKNLIN 302 Query: 291 TTLNNGLKDVPSRLLTPIDVNKNNIKDTV 319 +NN DVP+ L ++ N+ D V Sbjct: 303 GKVNNKFMDVPAVFLPVSNITAANLSDVV 331 >UniRef50_Q0SK74 ABC sugar transporter, periplasmic solute-binding protein n=2 Tax=Rhodococcus RepID=Q0SK74_RHOSR Length = 363 Score = 124 bits (312), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 89/296 (30%), Positives = 147/296 (49%), Gaps = 12/296 (4%) Query: 41 QKDRDIFVKKAESLG--AKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNV 98 ++D +F E A V V++A G+ Q SQ+E+ I G VLV+I + + Sbjct: 50 ERDEPLFTDFLELFAPEATVTVRNAEGDPARQQSQVESAIAEGASVLVLISTDARFSGGA 109 Query: 99 VKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIV---PQGNYFL--MG 153 + A + + V+ YD D + FD +VG Q D++ P + +G Sbjct: 110 LTAAAEADVPVVLYDHDAVGGPADVQVIFDPLEVGRRQGSRAADLIAAMPGDGVKIARVG 169 Query: 154 GSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKID 213 G+ + + F GQ + L+P DSGKI+VV + +D W P E L NN I Sbjct: 170 GNLGEYGTRQFLLGQDEFLQPLADSGKIRVVCETAIDDWDPAEGQAFAEECLARENNDIA 229 Query: 214 AVVASNDATAGGAIQALSAQGLSGKVAIS-GQDADLAGIKRIAAGTQTMTVYKPITLLAN 272 V ND GG + AL+ +GL+G++ ++ GQDA+LA ++ IA T T++K ++ A Sbjct: 230 LFVTMNDDLGGGIVAALAGRGLAGRIPVTGGQDANLAALQLIAQETLDNTIFKNLSDQAK 289 Query: 273 TAAEIAVELGNGQ---EPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFH 325 AA++ + +G E + T++N VP+ L ++ K+N+ D V+ GF+ Sbjct: 290 VAAQLTTSILHGDGIPEEIVNGTIDNQYMAVPTVFLPVQNITKDNL-DVVVNSGFY 344 >UniRef50_UPI00005103C7 solute-binding protein n=1 Tax=Brevibacterium linens BL2 RepID=UPI00005103C7 Length = 364 Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 91/271 (33%), Positives = 146/271 (53%), Gaps = 19/271 (7%) Query: 56 AKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRM 115 AKV ++AN + Q Q E + GVD +V+ P + +++ + +A+ + I V+AYDR Sbjct: 82 AKVEYRNANQDATQQQQQFEAAVTEGVDAIVLDPVDASAVTSALSKAQAKKIPVIAYDRF 141 Query: 116 INDADIDFYISFDNEKVGELQAKALVDIV------PQ-GNYFLMGGSPVDNNAKLFRAGQ 168 AD +Y SFDN+K+G LQ +A++D + P+ G +++ G P D NA F+AG Sbjct: 142 FEGAD--YYTSFDNKKIGNLQGQAVLDGLKAEDKDPKSGPVWMVNGDPKDPNAADFKAGA 199 Query: 169 MKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQ 228 + LK + + W P++A + +E L + + + A+ ++ND TAGG + Sbjct: 200 EETLK----KAGVDITESHDTLDWNPDDARQWVEGQLQSADKEPIAIYSANDGTAGGVLA 255 Query: 229 ALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPK 288 A + K ++GQDA++ G++ I G Q T+YK I A AA+ AV L G+EPK Sbjct: 256 ATKKAKV--KPVVTGQDAEVDGLQNILRGDQYATIYKSIPPQAEFAAKAAVALAGGEEPK 313 Query: 289 ADTTLNNGLKDVPSRLLTPIDVNKNNIKDTV 319 A TT KD P+ + V + +KD V Sbjct: 314 AGTT----YKDTPTDFVEAKVVTTDTVKDIV 340 >UniRef50_C0C295 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C295_9CLOT Length = 330 Score = 117 bits (292), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 81/239 (33%), Positives = 131/239 (54%), Gaps = 6/239 (2%) Query: 49 KKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIK 108 KKAE LG + + A + + Q++QIEN+I + VDV+++ + + ++ GI Sbjct: 67 KKAEELGCDLVMLDAQQDAQNQITQIENLIAQKVDVIIVAAVDSDAILPAIEMCDDAGIP 126 Query: 109 VLAYDRMINDADIDFYISFDNEKVGELQAKALVD-IVPQGNYFLMGGSPVDNNAKLFR-A 166 ++ + + N + Y+ D+ GEL+ + +D I +GN ++ G P+ +A++ R Sbjct: 127 LVGVNMLFNTEEPYHYVGPDDVLAGELEMQNAIDEIGGEGNVVILEG-PIGQSAQIQRLE 185 Query: 167 GQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGA 226 G +L Y GKI V+ DQ + W E AL ++EN L + KIDA+VA ND A GA Sbjct: 186 GNQNILDKY--EGKINVLADQTAN-WSREEALTLVENWLETFSGKIDAIVAHNDEMALGA 242 Query: 227 IQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQ 285 IQAL A GL+ K+ ++G DA L G + GT TVY+ L + A + A ++ G+ Sbjct: 243 IQALEAAGLTDKIVVTGVDAILDGCNAVKDGTLLGTVYQDAGLEGSEAVQKAYDVLEGK 301 >UniRef50_B5K0N1 ABC sugar transporter, periplasmic solute-binding protein n=2 Tax=Octadecabacter antarcticus RepID=B5K0N1_9RHOB Length = 364 Score = 110 bits (275), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 93/348 (26%), Positives = 167/348 (47%), Gaps = 22/348 (6%) Query: 2 KIKNILLTLCTSLLLTNVAAHAKEVKIGMAI-------DDLRLERWQKDRDIFVKK-AES 53 K + L + +LL T AA + G + +R ER +D +FV AE Sbjct: 6 KTRLTLGSAAVALLATGFAAGPAAAEDGAKVFFMLPNSTTIRFER--RDAPLFVAAMAER 63 Query: 54 L-GAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAY 112 L A+V VQ+ G+ Q +E+ + +G D++V + + + + A+ + V+ Y Sbjct: 64 LPNAEVIVQNGEGDPTRQQRLVEDALVQGADLIVYASSDANLAAGALLAAEDASVPVMLY 123 Query: 113 DRMINDADIDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNN-----AKLFRAG 167 + + ++ F+ VG+ Q +++ + ++ + V N + G Sbjct: 124 EHDSVGGRAEAHVLFNALAVGQAQGARAAELIEAMDRDIVRVARVMGNQGEYGTAQYEIG 183 Query: 168 QMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAI 227 Q + L+P +D+GK++VV + + W P A EN LT +D + ND T GG++ Sbjct: 184 QDQFLQPLIDAGKVEVVCEAFTPNWDPTLAQTFAENCLTRTGGGVDMFLGMNDGTTGGSV 243 Query: 228 QALSAQ--GLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQ 285 AL +Q GL+ V GQDA + +K I G Q TV+K + ++A AA++AV + +G Sbjct: 244 AALISQGYGLNEIVVTGGQDATIEAVKYIVQGWQDNTVFKDLRVMAEGAADVAVAILDGD 303 Query: 286 EPKA---DTTLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 + A + +NNG D+P+ L ++ +N+ D V+ G + +L Sbjct: 304 DLPAQWINGEVNNGFMDIPAAFLPVNNITIDNVAD-VVDAGLYTWEQL 350 >UniRef50_P0C0J7 46 kDa surface antigen n=6 Tax=Mycoplasma hyopneumoniae RepID=P46_MYCH2 Length = 416 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 94/303 (31%), Positives = 141/303 (46%), Gaps = 57/303 (18%) Query: 28 IGMAIDDLRLERW---QKDRDIFVKKAESLGAKVFV-QSANGNEETQMSQIENMINRGVD 83 I +A+ D RW QKD +V + E+ + + Q A N TQ + + + Sbjct: 55 IRIALTDPDNPRWISAQKDIISYVDETEAATSTITKNQDAQNNWLTQQANL----SPAPK 110 Query: 84 VLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD-IDFYISFDNEKVGELQAKAL-- 140 +I P NG + V +GI ++AYDR+I +D D+Y+SFDNEKVGELQ +L Sbjct: 111 GFIIAPENGSGVGTAVNTIADKGIPIVAYDRLITGSDKYDWYVSFDNEKVGELQGLSLAA 170 Query: 141 ---------VDIVPQGN-------------YFLMGGSPVDNNAKLFRAGQMKVLKPYVDS 178 D + Q N ++ + GS DNN++ F G MKVLK + + Sbjct: 171 GLLGKEDGAFDSIDQMNEYLKSHMPQETISFYTIAGSQDDNNSQYFYNGAMKVLKELMKN 230 Query: 179 GKIKVV-----GDQ--WVDGWLPENALKIMENALTANN-----NKIDAV----------- 215 + K++ G+ +V GW A + +++ LT N NKI AV Sbjct: 231 SQNKIIDLSPEGENAVYVPGWNYGTAGQRIQSFLTINKDPAGGNKIKAVGSKPASIFKGF 290 Query: 216 VASNDATAGGAIQALSAQGL-SGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTA 274 +A ND A AI L +G + K+ ++GQD + I G Q MT+YKP +L A Sbjct: 291 LAPNDGMAEQAITKLKLEGFDTQKIFVTGQDYNDKAKTFIKDGDQNMTIYKPDKVLGKVA 350 Query: 275 AEI 277 E+ Sbjct: 351 VEV 353 >UniRef50_A1B0U9 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1B0U9_PARDP Length = 357 Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 88/289 (30%), Positives = 146/289 (50%), Gaps = 17/289 (5%) Query: 55 GAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDR 114 G ++ V +AN + + QM+Q + + G +++I + ++++ +A+ +G+ V+ Y Sbjct: 61 GVELKVLNANDDMQAQMAQADAALASGTRGIILISVDPPRSASILAKAEADGVPVVTYAH 120 Query: 115 MINDADIDFYISFDNEKVGELQAKALVDIVPQGNYF---LMGGSPVDNNAKLFRAGQMK- 170 + +++S +GE Q + L + +P+ LM G P F A QMK Sbjct: 121 DPGPGPVSYHVSVPFADIGEAQGRYLAENLPETRPVKLALMLGDP----KFAFYAEQMKG 176 Query: 171 ---VLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAI 227 L+P + SG++++ +L NA K ME LT NN++D VV ND GG I Sbjct: 177 FDKYLEPLIASGEVEIACRADALLYLAANAQKNMEQCLTRTNNEVDGVVVMNDDIGGGVI 236 Query: 228 QALSAQGLSGKVAI-SGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQ- 285 AL+AQ L G+V I G DA L GI+R+ G Q + P +A+ AA++ V G+ Sbjct: 237 AALAAQDLVGEVPIFGGYDATLEGIQRVLLGWQKADMAPPYQAMADAAAQLVVAAAQGEA 296 Query: 286 --EPKADTTLNNGLKD--VPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 E + T NG + VP+R+ I + N+++TVI G + EL Sbjct: 297 APEGLVNGTWENGHAEGGVPARIEPNIFITPENVQETVIDAGLYTRDEL 345 >UniRef50_B8I2K0 Periplasmic binding protein/LacI transcriptional regulator n=3 Tax=Clostridium RepID=B8I2K0_CLOCE Length = 333 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 81/264 (30%), Positives = 138/264 (52%), Gaps = 10/264 (3%) Query: 24 KEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVD 83 K++ +GM + L+ E + + KKA LG ++ + N + TQ++Q+E MI+ GVD Sbjct: 52 KKIVVGMTLYSLKNEFTVRLSNAAKKKAAELGVELKIYDGNYDPNTQINQVETMISDGVD 111 Query: 84 VLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVD- 142 +++ P + + + V +A I V+ + ++ + Y+ + GEL+ +A+ D Sbjct: 112 AIILNPQDAKACAVAVDKAAAANIPVIGVNTRVDSEKLTSYVGSKDVYAGELEMQAIADK 171 Query: 143 IVPQGNYFLMGGSPVDNNAKLFRA-GQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIM 201 I +GN ++ G P+ +A+L R+ G VLK Y D IKV+ ++ + W A+ +M Sbjct: 172 IGGKGNIVILDG-PLGQSAQLERSEGIQNVLKKYPD---IKVLAEKTAN-WSRSEAMTVM 226 Query: 202 ENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTM 261 EN L A +KIDAVVA ND A GA +A+ A+ L + G D + + GT Sbjct: 227 ENWLQA-FDKIDAVVAENDEMALGARKAIEAKKLD--IPTIGVDGITDALDAVEKGTLIA 283 Query: 262 TVYKPITLLANTAAEIAVELGNGQ 285 T+++ + A EIAV G+ Sbjct: 284 TIFQDGAGQGSKALEIAVAKAKGE 307 >UniRef50_Q883G4 Ribose ABC transporter, periplasmic ribose-binding protein n=4 Tax=Pseudomonas RepID=Q883G4_PSESM Length = 310 Score = 90.9 bits (224), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 85/272 (31%), Positives = 137/272 (50%), Gaps = 22/272 (8%) Query: 23 AKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGV 82 AKE+ IG+A+ +L+ + + + + + ++ G K+ A GN TQ+SQIE++I R + Sbjct: 26 AKELTIGLAVANLQADFFNQIKQSVEAEGKARGVKIITVDAQGNSSTQVSQIEDLITRQI 85 Query: 83 DVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDN--------EKVGE 134 D L+ IP VK AK GI V+A DR DA D +I+ D+ E VG+ Sbjct: 86 DALIYIPAGATAAGVPVKAAKAAGIPVIAVDRNAPDAPGDTFIASDSVAGAKALAEYVGK 145 Query: 135 LQ-AKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWL 193 + K + I+ QG +G +P ++ AK F+ G LK + +KVV +Q + W Sbjct: 146 VTDGKGRIAIL-QGQ---LGTTPENDRAKGFQEG----LKGFPG---LKVVAEQPAE-WA 193 Query: 194 PENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKR 253 + + ++ L + N I DA A GA QA+ LS V + G D D+AG+K Sbjct: 194 QDKGFAVAQDLLQRDPN-ITVFFGRADAMALGAAQAVKVANLSQPVVVVGFDGDVAGLKA 252 Query: 254 IAAGTQTMTVYKPITLLANTAAEIAVELGNGQ 285 +A+G T+ + + A A++L G+ Sbjct: 253 VASGVLQATMTQQTQKMGRMAVASALDLKAGK 284 >UniRef50_C2KYA7 Possible periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Oribacterium sinus F0268 RepID=C2KYA7_9FIRM Length = 281 Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 77/224 (34%), Positives = 119/224 (53%), Gaps = 11/224 (4%) Query: 69 TQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADI-DFYISF 127 TQ+SQIE + GVD ++I P + + VK+A++ G+KV+ ++ I+D + D ++ Sbjct: 45 TQVSQIEQAVTLGVDGIIIEPVSTDGIVKAVKDAEKVGVKVVILNQRISDQNAADTFVGA 104 Query: 128 DNEKVGE-LQAKALVDIVPQGNYFLMGGSPVDNNAKLFRA-GQMKVLKPYVDSGKIKVVG 185 DNE G L K + D+ +GN + G P+ ++ ++ R+ G VL Y D +KV+ Sbjct: 105 DNESTGAALMKKVMEDLDGKGNIVELLG-PMGSDGQVGRSKGFDSVLAEYPD---VKVIA 160 Query: 186 DQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQD 245 D W AL + EN LT+++ I AVVA ND A GA QA+ GL+ K+ + G D Sbjct: 161 SDSAD-WDTAKALTLTENWLTSSD--IQAVVAQNDGMAVGAAQAIKEAGLTDKIKVYGVD 217 Query: 246 ADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQE-PK 288 A G+ I G T TV + +A++ L GQ PK Sbjct: 218 ATSDGLNAIVNGGMTGTVSQGTENQGKISADLCSNLIYGQSVPK 261 >UniRef50_A5CYL7 ABC-type sugar transport system, periplasmic component n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5CYL7_PELTS Length = 432 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 80/302 (26%), Positives = 148/302 (49%), Gaps = 23/302 (7%) Query: 21 AHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESL--------GAKVFVQ--SANGNEETQ 70 A +E++I +++ DL ++D + +K+A + G KV + A + Q Sbjct: 36 AGGQEIRIAVSLADL-----ERDGNQIIKRAMTARAGEGGQGGQKVSITWLDAGNDPARQ 90 Query: 71 MSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNE 130 +E + ++ V +V+ P + +V++ + GIKV+A D + D+ +D YI+FD+ Sbjct: 91 EKDLEQLADQKVRAVVLQPVDPAAGPGLVRKLARAGIKVVALDTLPADSPLDGYIAFDHA 150 Query: 131 KVGELQAKALVDIVPQGNY----FLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGD 186 + GELQA+ L+++ + N ++ G D ++ A ++ L+ + ++V Sbjct: 151 RAGELQARYLLEMARERNAPVKAVILTGDKNDQASREVAASLLENLREHPQVQVVQVKDH 210 Query: 187 QWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDA 246 D P+ AL +E AL A ++DAV+A++ A A + L ++GL +V G A Sbjct: 211 PRGD---PQAALVTLEQALAAAGGRLDAVLATDSRLAAAAAEMLKSRGLDRQVVTLGVGA 267 Query: 247 DLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLT 306 + +AAG V L+A A + A+ L + D + NG DVP+R +T Sbjct: 268 GQKACQALAAGEHDAEVDVMPDLMAQYAFDAALGLAATGHWQYDRQVKNGDFDVPAR-VT 326 Query: 307 PI 308 P+ Sbjct: 327 PV 328 >UniRef50_C5EHH7 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHH7_9FIRM Length = 330 Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 86/315 (27%), Positives = 153/315 (48%), Gaps = 32/315 (10%) Query: 21 AHAKEVKIGMAIDDLRLE---RWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENM 77 A A+E+ IG + +L E Q ++ +K +++ K+ + A + Q SQ+++ Sbjct: 41 AAAEELVIGCTLQNLSEEFMTMLQGAMELQLKNYDNV--KLIINDAESQSDKQASQLDSF 98 Query: 78 INRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQA 137 + +GVD ++I P + L++ VK GI V+ + ++ NE GE++ Sbjct: 99 VAQGVDAVIISPVDADALASAVKTVVDAGIPVITCSADVTGDQGQVWVGSSNENGGEIEM 158 Query: 138 KALVD-IVPQGNYFLMGGSPVDNNAKLFR-AGQMKVLKPYVDSGKIKVVGDQWVDGWLPE 195 K + + + +G ++ G P+ A+ R AG VLK Y D I++V DQ W E Sbjct: 159 KYVAEKLGGKGKIAVLRG-PLGAFAEQGRFAGYETVLKDYPD---IEIVFDQ-TGNWQRE 213 Query: 196 NALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIA 255 A+ ++EN LTA ++DA+V ND A GA++A+ A G ++ I+G DA + + I Sbjct: 214 EAMALIENLLTA-GTELDAIVCQNDGMALGALEAVKAAGKKDQITITGIDAIVDALDSIK 272 Query: 256 AGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNI 315 AG T ++ A ++AV+ G+ + D+P L+T K+N+ Sbjct: 273 AGELDATCFQDAIGQGTNALDMAVKAARGETVER--------MDIPFELVT-----KDNV 319 Query: 316 KDTVIKDGFHKESEL 330 DG++ +L Sbjct: 320 ------DGYYDRIKL 328 >UniRef50_D1AGX3 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AGX3_SEBTE Length = 319 Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 86/314 (27%), Positives = 155/314 (49%), Gaps = 20/314 (6%) Query: 5 NILLTLCTSLLLTNVAAHA-KEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSA 63 +I L C+ T K++K+G++I + D K AE G + ++ Sbjct: 17 SIFLISCSQKGDTADGGQGGKKIKVGVSIANFDDTFLTYMMDGMKKAAEKEG-DIELEFV 75 Query: 64 NGNEE--TQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI-NDAD 120 + E+ QM+Q+EN + +G DV++++P + + A G K++ +R N D Sbjct: 76 DAKEDIAKQMNQVENFVTQGKDVIIVVPVDTSAADPMTNAAVTNGTKIVYVNRNPGNLPD 135 Query: 121 IDFYISFDNEKVGELQAKALVD-IVPQGNYFLMGGSPVDNNAKLFRA-GQMKVLKPYVDS 178 +Y+ + +K G +Q + L + + +GN ++ G +DN + R G ++ K Y D Sbjct: 136 GAYYVGSEEKKAGIMQMEYLAEKMGGKGNIVILMGK-LDNEGTIKRTEGVEEIAKKYPD- 193 Query: 179 GKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGK 238 IK++ D+ W + + EN L N+I+A+V++ND A GA+QAL G +G Sbjct: 194 --IKIL-DKQTGLWQRTDGMAKTENWLNKYGNEINAIVSNNDDMALGAVQALKDSGKTG- 249 Query: 239 VAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLK 298 + + G DA G+ +AAG + TV++ A E+A + NG+ +T Sbjct: 250 IFVIGVDATPDGLAALAAGDISATVFQDADGQGGGAVEVAKKAANGETVVKETW------ 303 Query: 299 DVPSRLLTPIDVNK 312 VP +L+TP ++N+ Sbjct: 304 -VPFKLVTPENINE 316 >UniRef50_C6JG14 Monosaccharide-transporting ATPase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG14_9FIRM Length = 488 Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 88/330 (26%), Positives = 162/330 (49%), Gaps = 29/330 (8%) Query: 27 KIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLV 86 KIG+ + D E + D + + E G + V++A G+ Q+SQI+ I+ V L+ Sbjct: 97 KIGVLLSDDD-EDAKIDSEEMTSQIEDGGYEADVKNAGGDPALQISQIQEFIDEQVSALI 155 Query: 87 IIPYNGQVLSNVVKEAKQEGIKVLAYDRMIND-ADIDFYISFDNEKVGELQAKALVDIV- 144 I P + L++++K AK++ I V++YD +I D ADI++Y ++D +G+ AK ++ + Sbjct: 156 IDPVDSYGLTDILKTAKEQEIPVISYDSLIRDTADINYYATYDTRAIGKDIAKEIIKKMD 215 Query: 145 ------PQGNY---FLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKI------KVVGDQWV 189 + +Y FLM GSP DN A G + L+ Y+D G + D + Sbjct: 216 LDKAREDKKSYTIEFLM-GSPDDNAALFLCNGIQEGLQEYLDDGTLVCKSGNTSFDDTGI 274 Query: 190 DGWLPENALKIMENALT---ANNNKIDAVVASNDATAGGAIQALSAQGLSGKV----AIS 242 W +A +++ ++ A D + + D A A + LS GL I+ Sbjct: 275 MRWSETSAKTKLDSIISEFYAEEKAPDIICTAYDGFAYAAEEILSDSGLEPGSDEWPMIT 334 Query: 243 GQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQ--EPKADTTLNNGLKDV 300 G ++ +K IAAG + T++ LA A++A++ G+ + K + +NG+K V Sbjct: 335 GYGSEAQAVKDIAAGKMSFTMFMDRKELAKGGAQMAIDYLTGEKVDVKDYSQYDNGVKIV 394 Query: 301 PSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 + ++K+N + ++ +G + E E+ Sbjct: 395 GTFTCGAQMIDKDNYQ-ILVDNGTYTEDEI 423 >UniRef50_C1D8A9 RbsB n=14 Tax=Bacteria RepID=C1D8A9_LARHH Length = 309 Score = 87.0 bits (214), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 73/238 (30%), Positives = 121/238 (50%), Gaps = 7/238 (2%) Query: 49 KKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIK 108 ++A+ G + A + Q++ IE++I + V V+++ P + + VK A GI Sbjct: 63 EEAQKQGLTLITVDAQDDPAKQIASIEDLIQKKVKVILVNPTDSDAVVGAVKAANAAGIP 122 Query: 109 VLAYDRMINDADIDFYISFDNEKVGELQAKALVD-IVPQGNYFLMGGSPVDNNAKLFRAG 167 V+ DR +N ++ +++ DN G++ A+ L++ I QG+ + G P + A+ G Sbjct: 123 VVTLDRSVNGGEVASHVASDNVAGGKMAAEYLLEKIGNQGDVVELEGIPGASAARERGQG 182 Query: 168 QMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAI 227 V+ D +KVVG Q D + L +MEN L AN N + V A ND A GA+ Sbjct: 183 FHDVIDQAKD---VKVVGRQPAD-FDRAKGLSVMENILQANKN-VKGVFAHNDEMALGAV 237 Query: 228 QALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQ 285 QAL A G+ V + G DA + + AG + TV + L+ TA + A ++ +GQ Sbjct: 238 QALEAAGMK-DVTVVGFDATDDAVNAVKAGKMSATVAQKPKLIGKTAVDAAKKIIDGQ 294 >UniRef50_C8VY22 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VY22_DESAS Length = 436 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 80/299 (26%), Positives = 139/299 (46%), Gaps = 16/299 (5%) Query: 23 AKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGV 82 +++VKIG+ + D+ + + + I ++A+ G Q A + E Q QI ++ + V Sbjct: 25 SQKVKIGVCLADMERDGNRIIKKIMTERAQKEGISFTWQDAGNDAEKQQEQINELVKKKV 84 Query: 83 DVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVD 142 +++ + + + ++GIK +A + + + +D Y++ D+ +VGELQA+ ++ Sbjct: 85 KAVILQAVDPSAGPAIARTLTEKGIKTVALETLPANTPLDAYVASDHGRVGELQARYALE 144 Query: 143 IVPQG------NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPEN 196 G ++ G P D A+ A VLK +KV + D P Sbjct: 145 QSAAGGKTEGLRILVLQGDPSDLAAREITAANEAVLKGDKRVADLKVQSNLRAD---PGL 201 Query: 197 ALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAA 256 A +EN L A K+DAV+A++ A A+Q L+ + L+ +V G AD ++ IA+ Sbjct: 202 ARVAVENTLAA--GKLDAVLANDSRLAMAAVQVLTERNLAAQVVTVGVGADSKSVRGIAS 259 Query: 257 GTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDV-----PSRLLTPIDV 310 G V LLA + AVEL + + NG DV P RL+T D+ Sbjct: 260 GQHDAEVDNSPELLAQYITDAAVELAKTGHWQYTGHVPNGQYDVATKITPVRLITMKDL 318 >UniRef50_Q65S41 RbsB protein n=8 Tax=Pasteurellaceae RepID=Q65S41_MANSM Length = 313 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 78/270 (28%), Positives = 129/270 (47%), Gaps = 14/270 (5%) Query: 3 IKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQS 62 +KNI L +A A + +I + + L E + R + A+ + VQ Sbjct: 6 LKNIFKFSALISALPALAFAADKPQIALLMKTLSNEYFISMRQGAEETAKEKNIDLIVQV 65 Query: 63 ANGNEETQ--MSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYD-----RM 115 A + T+ + +ENMI + VD +++ P + ++A++ GI ++ D + Sbjct: 66 AEKEDSTEQLVGLVENMIAKKVDAIIVTPNDSIAFIPAFQKAEKAGIPIIDLDVRLDAKA 125 Query: 116 INDADIDF-YISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLK 173 A + F Y+ DN G L+AK L + + +GN ++ G P +N + + G +K Sbjct: 126 AEAAGLKFNYVGVDNFNGGYLEAKNLAEAIGKKGNVAILEGIPGVDNGEQRKGGALKAFA 185 Query: 174 PYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQ 233 Y D IK+V Q + W E AL + N LTAN N I+ + A+ND A GA+ A+ Sbjct: 186 EYPD---IKIVASQSAN-WETEQALTVTTNILTANPN-INGIFAANDNMAIGAVTAVENA 240 Query: 234 GLSGKVAISGQDADLAGIKRIAAGTQTMTV 263 GL+GKV +SG D I+ + G T+ Sbjct: 241 GLAGKVLVSGYDGIPLAIEYVKQGKMQNTI 270 >UniRef50_A1WJM2 Periplasmic binding protein/LacI transcriptional regulator n=5 Tax=Proteobacteria RepID=A1WJM2_VEREI Length = 330 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 81/297 (27%), Positives = 138/297 (46%), Gaps = 21/297 (7%) Query: 27 KIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLV 86 KIG+++ L + + + + LG +V A G + Q+S +E+++ RGV +L+ Sbjct: 37 KIGVSMKTLSAPYFAAQMEAAKARGKELGYEVLATDAQGKLQKQISDVEDLVTRGVKLLI 96 Query: 87 IIPYNGQVLSNVVKEAKQEGIKVLAYDRMIND-ADIDFYISFDNEKVGELQAKALVDIVP 145 I P + + L N V A G+KV+ D +N A+ + N G L +++ V Sbjct: 97 INPADSEGLVNAVNNASANGVKVVVIDSTLNPRANFVTQVQSSNSINGALVGHWVIEEVG 156 Query: 146 QGNY---FLMG--GSPVDNNAKL-FRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALK 199 + L G G+PV +L +G ++ + VVG W W E LK Sbjct: 157 NKSLKIALLSGEKGNPVGQERRLGVLSGIIEAQLRKFGKADLTVVGQGW-GHWNDEGGLK 215 Query: 200 IMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQ 259 ME+ L AN + I+ V+ ND+ GA +A+ + G +G + ++ DA + I G Sbjct: 216 AMEDLLVANKD-INMVLGENDSMVLGARRAIESAGRTGILLVAAADAQKEALALIKQGKY 274 Query: 260 TMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSR-LLTPIDVNKNNI 315 +T L+A TA ++ V++ G+ +KDVP + L TP + K N+ Sbjct: 275 GVTGLNDPALVARTAIDLGVKVVKGE-----------VKDVPKQTLTTPAAITKGNV 320 >UniRef50_Q65E53 RbsB n=6 Tax=Firmicutes RepID=Q65E53_BACLD Length = 304 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 75/275 (27%), Positives = 138/275 (50%), Gaps = 12/275 (4%) Query: 25 EVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDV 84 ++KIG+++ L+ + ++ VK+A+ G +V V A + Q + +E+++ +GVD Sbjct: 36 DIKIGLSVSTLKNPFFVSLKNGVVKEAKKQGIEVIVVDAQDDSAKQTNDVEDLLQQGVDA 95 Query: 85 LVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIV 144 L+I P + +S V+ A GI V+ DR + ++ ++ DN K G++ A +V+ + Sbjct: 96 LLINPADSSAISTAVQSANSLGIPVVTLDRSAENGKVETLVASDNVKGGQMAADFIVEQL 155 Query: 145 PQGNYFL-MGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMEN 203 +G + G P + + +G K K+ V+ Q D + L +MEN Sbjct: 156 GKGAKVAELEGVPGASATRERGSGFHKTA-----DDKLNVIAKQTAD-FDRTKGLNVMEN 209 Query: 204 ALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTV 263 L N + I AV A ND A GAI+A+ + G ++ + G D + +K + AG + T+ Sbjct: 210 LLQGNPD-IQAVFAHNDEMALGAIEAIRSSG--KEILVVGFDGNEDAVKAVQAGDMSATI 266 Query: 264 YKPITLLANTAAEIAVELGNGQEPKADTTLNNGLK 298 + L+ A + A ++ NG+ K + T+ LK Sbjct: 267 AQQPELIGKLAVQAARDILNGK--KVEKTIPAPLK 299 >UniRef50_C1XWA5 Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XWA5_9DEIN Length = 261 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 49/167 (29%), Positives = 87/167 (52%), Gaps = 6/167 (3%) Query: 21 AHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINR 80 A +V +G++ L E W+ D + SLGA+ A G+ Q+ ++ + + Sbjct: 28 AQPSKVTVGVSWGHLEGE-WKIHEDALRARLGSLGAQYTRTDAKGSSAQQLRDMDALAAK 86 Query: 81 GVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKAL 140 G DVL+++ N + L + A+ GI V+AYDR + D FY+ FD + G +QA+A+ Sbjct: 87 GADVLIVVAANPEALRPGLARAQAAGIPVVAYDRPVPD-PAAFYVGFDELEAGRMQARAV 145 Query: 141 VDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQ 187 + P G Y L+ G A+ R G ++ L+ + +G ++VV ++ Sbjct: 146 YAVRPHGRYALLLGP----GAERVRQGLLERLEAALKAGDVRVVAER 188 >UniRef50_C0CNG0 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CNG0_9FIRM Length = 387 Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 84/333 (25%), Positives = 157/333 (47%), Gaps = 30/333 (9%) Query: 25 EVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDV 84 EV IG+ + W D E G V V+ A G+ Q +QI+ + ++ V Sbjct: 50 EVVIGVCTPKQPTDTWSGDVGNLKAGLEEEGWTVKVKEA-GDGAEQAAQIQELADQEVSA 108 Query: 85 LVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD-IDFYISFDNEKVGE------LQA 137 L++ P + +S + + +++ I V++Y R++ + D +++Y+ FD+E G+ A Sbjct: 109 LILAPVEPEAVSEALADYEEKEIPVISYSRLVPNTDAVNYYVGFDSEAAGQETGKYIESA 168 Query: 138 KALVDIVPQGNY----FLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVG------DQ 187 K L + G FL+G S D + + F G M+VLKPY + G ++ D Sbjct: 169 KDLENAKDAGKIYTIEFLLGDSE-DLDTQFFYEGLMEVLKPYFEEGVLQSKSGRTEFMDL 227 Query: 188 WVDGWLPENALKIMENALTA--NNNKIDAVVASNDATAGGAIQAL--SAQGLSGK----V 239 ++ + +++ L+ +D V D G +AL S+ L Sbjct: 228 CLNSYQAQDSKAKTSEILSQFYGEKALDIVCVETDQMVDGVEEALVESSYALHSSEHPWP 287 Query: 240 AISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTT--LNNGL 297 ++GQDA + I+R+ +G Q +TV + LL + +I + +G++ K +T+ +NG Sbjct: 288 VLTGQDASESAIRRVLSGQQGITVSREYELLDESCVDILKDKLSGEKVKVNTSRKYDNGS 347 Query: 298 KDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 + VP++L ++ +N K ++ G + E EL Sbjct: 348 RIVPAQLSDVQLIDLDNYK-ILMDMGIYTEEEL 379 >UniRef50_A5ZV14 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZV14_9FIRM Length = 490 Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 88/322 (27%), Positives = 148/322 (45%), Gaps = 35/322 (10%) Query: 40 WQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNV- 98 W +D + E G + A+ + Q+SQI+ M V +VI P + L++V Sbjct: 102 WTRDAKELEVQFEEDGYDPILLYADNDSSKQVSQIQQMAAEEVSAMVIAPVDPYGLADVL 161 Query: 99 --VKEAKQEGIKVLAYDRMINDAD-IDFYISFDNEKVGELQAKALVDI-----VPQGN-- 148 VK+A+ E I V++YD +I + D I +Y++F +VG++ AK ++D V + Sbjct: 162 ADVKDAEIE-IPVISYDDLIMNTDGIKYYVTFGGRQVGQMIAKQIIDSEELDKVQEAKES 220 Query: 149 ---YFLMGGSPVDNNAKLF-RAGQMKVLKPYVDSGKI------KVVGDQWVDGWLPENAL 198 F MG +D+ LF G M+ L+PY+D G + D + W E A Sbjct: 221 KTIEFFMGS--LDDTQALFLYNGVMETLQPYIDDGTLICKSGKTSFDDTGILRWSSEIAK 278 Query: 199 KIMENALT---ANNNKIDAVVASNDATAGGAIQALSAQGLSGKVA----ISGQDADLAGI 251 M + LT + D + D A G +AL G ISG + G+ Sbjct: 279 TRMTDILTEYYPDGAVPDIICTGFDDAAMGTEEALEEAGFVPGTENWPLISGAGCNEEGV 338 Query: 252 KRIAAGTQTMTVYKPITLLANTAAEIA-VELGNGQEPKAD--TTLNNGLKDVPSRLLTPI 308 +RIA G QT +++ LA+ E+ + L +P+ + +NG+K + S L P Sbjct: 339 RRIAEGKQTFSIFMDRRELADQCEEMVNIYLHGEDDPEVNDYEQYDNGIKIIASYLCEPQ 398 Query: 309 DVNKNNIKDTVIKDGFHKESEL 330 ++ N + +I +G++ E E+ Sbjct: 399 LIDGENY-EILIDNGYYTEDEV 419 >UniRef50_C5VU40 D-ribose-binding protein n=4 Tax=Bacteria RepID=C5VU40_CLOBO Length = 307 Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 85/312 (27%), Positives = 143/312 (45%), Gaps = 42/312 (13%) Query: 11 CTSLLL-------TNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSA 63 C S+LL +N A+E KIGM + L + ++ KK++ LG ++ V + Sbjct: 12 CASILLVLGFVGCSNKHTQAREKKIGMVVSTLNNPFFVSLKEGAEKKSKELGYELLVLDS 71 Query: 64 NGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDF 123 + + S IE++I G+ VL++ P + + N V+ A + I V+ DR N ++ Sbjct: 72 QNDPAKERSNIEDLIQGGISVLIVNPTDSDAVINSVQVANKANIPVITVDRQANGGEVVS 131 Query: 124 YISFDNEKVGELQAKALVD----------IVPQGNYFLMGGSPVDNNAKLFRAGQMKVLK 173 +I+ DN K GEL + ++D + QG + G S K F Sbjct: 132 HIASDNIKGGELASSFIIDELKNKKDIKVVELQG---IPGASATRERGKGFH-------- 180 Query: 174 PYVDS-GKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSA 232 +D +K++ Q + + L +MEN + A ++ DAV A ND A GA +AL Sbjct: 181 NIIDKKSNLKLISSQAAN-FDRAQGLSVMENIIQAQSD-FDAVFAHNDEMALGAAKAL-- 236 Query: 233 QGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTT 292 + + K+ + G D D I + TV + L+ +T+ E AV++ NGQ Sbjct: 237 KTANKKIIVVGFDGDEDAKTAIEKSEISATVAQQPALMGSTSIETAVKISNGQ------- 289 Query: 293 LNNGLKDVPSRL 304 N K++P +L Sbjct: 290 --NISKNIPVKL 299 >UniRef50_C1YJZ3 Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YJZ3_NOCDA Length = 268 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/168 (33%), Positives = 87/168 (51%), Gaps = 16/168 (9%) Query: 11 CTSLLLTNVAA----HAKE--VKIGMAIDDLRLERWQK-DRDIFVKKAESLGAKVFVQSA 63 C SL T A H E +G+ + DL R++ DR F + L + A Sbjct: 29 CGSLTTTGGEAEQETHTVEEGFHVGLLLPDLHTARYEAFDRPFFEEAMGELCPNCEISYA 88 Query: 64 NGNEET--QMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADI 121 N ++ Q +Q + M+ GVDVLV+ P + + V EAK +G+ V+AYDR+ + Sbjct: 89 NADQSVSEQQTQAQAMLTDGVDVLVLDPVDAAAAAGTVNEAKSQGVPVIAYDRLA-EGGA 147 Query: 122 DFYISFDNEKVGELQAKALVDI------VPQGNYFLMGGSPVDNNAKL 163 D Y+SFDN +VG++QA++L++ G+ +M GSP D NA + Sbjct: 148 DMYVSFDNNRVGQVQAESLLEALEEEGSTGDGSIVVMHGSPTDPNAAM 195 >UniRef50_A0JVZ4 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Arthrobacter sp. FB24 RepID=A0JVZ4_ARTS2 Length = 318 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 92/313 (29%), Positives = 150/313 (47%), Gaps = 27/313 (8%) Query: 5 NILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSAN 64 +I LT C + + AA + +KIG+ + + +Q++ +S+GA+V Q AN Sbjct: 23 SIGLTGCAT---ASGAAGDRPMKIGVTVANSTNPFFQQESKTAESYGKSVGAEVLSQVAN 79 Query: 65 GNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFY 124 + +TQ +QI+ I GV +VI + + VK A GI V+ D +A ++ Sbjct: 80 EDVQTQSNQIDQFITAGVKFIVIDAADTDGVGPAVKRAVSAGIPVIGVDNQSKNATVN-- 137 Query: 125 ISFDNEKVGELQAKALVD-IVPQGNYFLMGGSP---VDNNAKLFRAGQMKVLKPYVDSGK 180 I+ DN++ GE+ ++L D + +G ++ G+P VD+ G +L Y D Sbjct: 138 ITTDNKQAGEISCRSLADKLGGKGKIAILNGTPVSAVDDRVT----GCKGILGQYPD--- 190 Query: 181 IKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVA 240 IK+V DQ + ++AL I + LTAN + +D A ND +A G A +G S V Sbjct: 191 IKIVADQRGENSR-DSALPIATDILTANPD-LDGFFAINDPSAVGVQLAAEQKGAS--VV 246 Query: 241 ISGQDADLAGIKRIAAGTQ-TMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKD 299 I+ D + IAAG T T + L A ++ + + NG+EP L Sbjct: 247 ITSVDGASSATDAIAAGGLITATAAQDPAALMRQAIDLGISIVNGKEPDQKVIL------ 300 Query: 300 VPSRLLTPIDVNK 312 VP+ L+ +V K Sbjct: 301 VPTELVDASNVAK 313 >UniRef50_C4U114 Ribose-binding protein of ribose ABC transporter n=1 Tax=Yersinia kristensenii ATCC 33638 RepID=C4U114_YERKR Length = 322 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 75/269 (27%), Positives = 126/269 (46%), Gaps = 14/269 (5%) Query: 3 IKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKK-----AESLG-A 56 + + + L T N A K+ + + + L + +F+++ A++LG Sbjct: 8 MTTLAIALSTFAFSANAAPKGKDAPVTILVSALS---YSFPHFVFLQEQLEAEAKTLGNV 64 Query: 57 KVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI 116 K+ + Q++ IE I +GVD ++I P + L+ V++ A +EGI V+ DR + Sbjct: 65 KIIRSDGQLSAPKQIADIEAAIVQGVDGIIIAPADATALAPVLRTAIKEGISVVTIDRPV 124 Query: 117 ND-ADIDFYISFDNEKVGELQAKALVDIVPQGNYFL-MGGSPVDNNAKLFRAGQMKVLKP 174 N ++ ++ DN + Q +A+ + PQG + + G P D A G L Sbjct: 125 NGVPEVIANVAADNLIGAQRQGEAVEKLFPQGATIINLQGIPGDKTANDRSKGVHDTLDK 184 Query: 175 YVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQG 234 + + K V +Q + + L + EN LT N +VA ND +A GA QA+ A+G Sbjct: 185 HPE--LYKFVAEQTAR-FNRDQGLSVTENLLTGLANPPTVIVAGNDDSALGAAQAVEARG 241 Query: 235 LSGKVAISGQDADLAGIKRIAAGTQTMTV 263 L GK+AI G D +K + G T TV Sbjct: 242 LKGKIAIFGYDGSTDALKAVRDGVLTGTV 270 >UniRef50_B0URJ4 Monosaccharide-transporting ATPase n=6 Tax=Pasteurellaceae RepID=B0URJ4_HAES2 Length = 311 Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 89/315 (28%), Positives = 150/315 (47%), Gaps = 28/315 (8%) Query: 4 KNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSA 63 K +L LC LLLT+ A AK IG ++ ++WQ V+ + V ++ A Sbjct: 3 KTLLAMLCGGLLLTSQAVIAKNYVIGAPMNSFA-DKWQTYLQDAVRDFDEKHDDVQIKLA 61 Query: 64 NGNEET--QMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADI 121 + N + Q++ ++N I++ VD L+++P + V+ + AK+ GI ++ +R ND + Sbjct: 62 DSNSDPNIQVNLVQNFIDQNVDALLVVPTDPTVVKRIGVLAKKAGIPLIVVNRKPNDEHM 121 Query: 122 DFYISF---DNEKVGELQAKALVDIVPQGN---YFLMGGSPVDNNAKLFRA-GQMKVLKP 174 + SF D + G +Q +V+ + N L+G P+ +A R G ++ Sbjct: 122 QYVTSFVGSDEIEGGRIQGNFIVNTLAGKNAESLILLG--PLGQDAVTKRTQGNEEI--- 176 Query: 175 YVDSGKIKVVGDQWVDG-WLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQ 233 + IKVV Q +G W + L I EN L A N I+ +V++ND A GAI A Sbjct: 177 FAQHKNIKVVSKQ--EGRWERDRGLAIAENVL-AGNKGINVIVSNNDEMAIGAILATRKL 233 Query: 234 GLSGK-VAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTT 292 G+ + + I G DA ++ + G TV++ T AE+A G++ + Sbjct: 234 GIKDEDITIVGLDATPDALEYLGKGLDA-TVFQSAQGQGYTGAEMAYLAAKGEKVPS--- 289 Query: 293 LNNGLKDVPSRLLTP 307 +K VP L+TP Sbjct: 290 ----VKWVPFELVTP 300 >UniRef50_C9TJ16 Sugar ABC transporter n=2 Tax=Brucella pinnipedialis M163/99/10 RepID=C9TJ16_9RHIZ Length = 202 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 46/131 (35%), Positives = 75/131 (57%), Gaps = 2/131 (1%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVK-IGMAIDDLRLERWQKDRDIFVKKAESLGAKVF 59 M +K++ L + + AHA++ + +A+ RW D D VK + G + Sbjct: 37 MGMKSLTLAVAMAAFAFTGMAHAEDKGLVAVAMPTKSSARWIADGDNMVKVLKERGYQTD 96 Query: 60 VQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI-ND 118 +Q A + Q++QIENM+ +G VLV+ +G LS+V+ +A GIKV+AYDR+I N Sbjct: 97 LQYAEDDVPNQLAQIENMVTKGAKVLVVASIDGTTLSDVLAKAHDAGIKVIAYDRLIRNT 156 Query: 119 ADIDFYISFDN 129 ++D+Y +FDN Sbjct: 157 PNVDYYATFDN 167 >UniRef50_UPI0001B4C057 putative D-ribose-binding protein component of ABC transporter n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B4C057 Length = 325 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 84/304 (27%), Positives = 134/304 (44%), Gaps = 51/304 (16%) Query: 21 AHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINR 80 A K++ IG+A+ +L+ + + + + +A+ G KV V A G+ TQ++QI++ I+R Sbjct: 36 ADGKQITIGLAVANLQADFFNQIKQSVTAEAKKKGIKVIVSDARGDAATQVNQIQDFISR 95 Query: 81 GVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKAL 140 V ++ IP VK A + I V+ DR +I+ D+ A+ L Sbjct: 96 QVSAIIYIPAGATAAGVPVKAANRAKIPVVTVDRNPPGEPGKSFIASDSVAA----ARTL 151 Query: 141 VDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLK------PYVDSGK-----------IKV 183 GNY + ++ K GQ+ +L+ P VD K IKV Sbjct: 152 ------GNYVVK-----ESGGK----GQLAILQGQIGTTPQVDRQKGFGQALKNAPGIKV 196 Query: 184 VGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISG 243 V Q D W + A + ++ L A+ ID + DA A GA QA+ A G K I G Sbjct: 197 VSQQPAD-WAQDKAYSVSQDMLQAHPG-IDILWGQADAMALGAAQAVKASGSKKKHLIVG 254 Query: 244 QDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSR 303 D D+AG+K + GT T+ + + + AV++ G K VP++ Sbjct: 255 FDGDIAGLKAVRRGTVDATMVQQTRKMGRMSVNTAVDIIKG-------------KKVPAQ 301 Query: 304 LLTP 307 L P Sbjct: 302 QLQP 305 >UniRef50_A1SYD2 Bifunctional carbohydrate binding and transport protein n=12 Tax=Proteobacteria RepID=A1SYD2_PSYIN Length = 312 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 80/315 (25%), Positives = 143/315 (45%), Gaps = 20/315 (6%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKV-- 58 + I + ++C S + AK+ IG+ +++ ++ +Q DI +K + V Sbjct: 5 LAITGLAFSICFSTF-----SFAKDYVIGVTQNNVGVDSYQTTYDIALKDTMTKYPNVEG 59 Query: 59 FVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIND 118 V A GN Q++Q++++I + VD +++ P NGQ L+ +V++AKQ GI V+ + I++ Sbjct: 60 IVLDAGGNVARQIAQVQDLIQQEVDAIILWPTNGQALTPIVRKAKQMGIPVIITNSNISE 119 Query: 119 ADIDFYISFDNEKV---GELQAKALVD-IVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKP 174 +F +F G+ A+ + + + +G + G P A + G L Sbjct: 120 KGQEFITAFSGPNTITQGQYAAELMCEGLNGKGQVVQITGQPGYQTAINRQKGFEDSLA- 178 Query: 175 YVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQG 234 D + ++ Q D W E + ++MEN +T KID V A++D GA+ A+ Sbjct: 179 -ADCPGVSIIDSQPGD-WNREKSQRVMENFITRFGTKIDGVYAADDNMGIGALNAIKEAD 236 Query: 235 LSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLN 294 L + I G G I G+ +V + A A I +++ NG + + D Sbjct: 237 LK-NIKIVGATNFAVGYDAIKEGSYYGSVVQSPVSDAIAALAITMKILNGDKVEKDNYF- 294 Query: 295 NGLKDVPSRLLTPID 309 D P L ID Sbjct: 295 ----DTPKVTLANID 305 >UniRef50_B0NBQ1 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NBQ1_EUBSP Length = 352 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 85/343 (24%), Positives = 157/343 (45%), Gaps = 36/343 (10%) Query: 2 KIKNILLTLCTSLLLTNVAAHAKE-----VKIGMAI---DDLRLERWQKDRDIFVK-KAE 52 +I I L LC + ++ A K+ +KIG+AI DD + + +K K E Sbjct: 7 RIARICLALCLAAMMAGCAGTEKKEEKTGIKIGVAIYRGDDAFISSLCASLENAIKDKEE 66 Query: 53 SLGAKVFVQSANG--NEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVL 110 LG KV V A+ ++ +Q Q+++ I +G D + + + V + +V +AK+ GI ++ Sbjct: 67 KLGKKVVVNIADAKNSQSSQNDQVDDFIRKGYDAICVNMVDRTVAAVIVDKAKEAGIPII 126 Query: 111 AYDRMINDADI-----DFYISFDNEKVGELQAKALVD--------IVPQGN----YFLMG 153 ++R + D+ +Y+ D + GEL+ + + D I G+ Y ++ Sbjct: 127 FFNREPVEEDMAIWNQTYYVGTDAREAGELEGQIVADAWKSQESRIDKNGDGKLQYVMLE 186 Query: 154 GSPVDNNAKLFRAGQMK-VLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKI 212 G V ++ + +K +LK + + K+ W+ A ++M+ + ++I Sbjct: 187 GEQVHQDSLIRTEYSVKTILKEGIVTEKLA----SGTGNWMRSPAYELMQEWIGQYGSQI 242 Query: 213 DAVVASNDATAGGAIQALSAQGLSGKVA--ISGQDADLAGIKRIAAGTQTMTVYKPITLL 270 + V+++ND A GAI+AL G+SG + G D G+++I G TV Sbjct: 243 EVVLSNNDEMAMGAIEALVENGMSGGNGPIVVGIDGTEDGLEKIIKGEMEGTVMNDARGQ 302 Query: 271 ANTAAEIAVELGNGQEPKADT-TLNNGLKDVPSRLLTPIDVNK 312 A + IA G++PK + L VP +T +V + Sbjct: 303 AESILGIACACAEGKDPKQEVPELKGQYVRVPHSPVTADNVQE 345 >UniRef50_Q98LI2 Periplasmic ribose-binding protein n=2 Tax=Proteobacteria RepID=Q98LI2_RHILO Length = 315 Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 82/274 (29%), Positives = 127/274 (46%), Gaps = 32/274 (11%) Query: 58 VFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIN 117 + V N + Q++ +E++I +G+ VL+I P Q L+ VVKEA GIKV+ DR +N Sbjct: 67 LIVTDGNNDASKQVADVESLIAQGIKVLMISPLTEQALTPVVKEAMDAGIKVVTLDRKVN 126 Query: 118 DADIDFYISFDNEKV----GELQAKALVDIVPQGNYFLMGGSPVDNNAKLFR-AGQMKVL 172 + ++ +N + GE AK L +GN + G+ +A + R G + + Sbjct: 127 -TPVTVHVGGENLPLGVGAGEFLAKKLNG---KGNIIELQGT-AGASATIDRNKGFAEAI 181 Query: 173 KPYVDSGKIKVVGDQWVDGWLPENALKIMENALTA-NNNKIDAVVASNDATAGGAIQALS 231 + D +KVV Q D + + A+K ME+ + +I AV A ND A GAIQ L Sbjct: 182 AKHPD---MKVVASQNCD-YTRDKAVKFMEDMVQRFGPGQIQAVYAHNDEMALGAIQVLE 237 Query: 232 AQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADT 291 A G +VA+ G D + + G T P +A E A ++ G+E Sbjct: 238 AAGRLNEVAVVGIDGQETAFEAVKQGKLAATFVYP--FVAPEGIETAYKVAKGEE----- 290 Query: 292 TLNNGLKDVPSRLLTP-IDVNKNNIKDTVIKDGF 324 VP + P + V +NI D +I GF Sbjct: 291 --------VPETITLPTVSVTPDNIAD-MIGKGF 315 >UniRef50_Q0RYT8 ABC sugar transporter, periplasmic substrate binding protein n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0RYT8_RHOSR Length = 340 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 64/223 (28%), Positives = 116/223 (52%), Gaps = 11/223 (4%) Query: 49 KKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIK 108 K AE FV ++N + Q SQ++ I + VD +VI P ++ +A++ GI Sbjct: 66 KAAEEHHVNAFVMNSNYDASVQASQMKIAIAKKVDGIVIWPALYGAEQPMLIQAQRAGIP 125 Query: 109 V-LAYDRMINDADIDFYISF---DNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKL 163 V ++ + D D Y +F +++++GELQ K L ++ +G Y +GG+P N A + Sbjct: 126 VDISNSQPPEDLDTSLYHAFTGPNDQRIGELQGKELAKLLGSKGTYVYIGGTP-GNAAAI 184 Query: 164 FRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTAN-NNKIDAVVASNDAT 222 R Q+ + + + +K++G Q G +N + +AL + N+IDA+V +D Sbjct: 185 NR--QIGLEREMANHPDVKLLGSQ--PGNFDKNQAQTAASALISRFGNQIDALVTPDDII 240 Query: 223 AGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYK 265 A GA QAL A G++G+V + G + + G+ + T+++ Sbjct: 241 ASGAAQALDAAGMAGQVKLLGHNYAPVARSLLENGSMSTTLFQ 283 >UniRef50_Q97JD5 Periplasmic sugar-binding protein n=1 Tax=Clostridium acetobutylicum RepID=Q97JD5_CLOAB Length = 319 Score = 77.0 bits (188), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 83/318 (26%), Positives = 152/318 (47%), Gaps = 33/318 (10%) Query: 6 ILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKK--------AESL-GA 56 LLT C ++ +K+ +IG++I D+F K A++L Sbjct: 16 FLLTACAQK--KSIVYKSKKYRIGLSI--------PASDDVFRNKIINAMENEAKNLPDT 65 Query: 57 KVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI 116 + V +A G+ Q SQI N++ + + ++++P + + S+ + A GI +++ + + Sbjct: 66 DLVVVNAKGDPARQKSQISNLVAQKCNAILVLPVDTLLSSDYTQIANDSGIPIISVNNFL 125 Query: 117 -NDADIDFYISFDNEKVGELQAK-ALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKP 174 N D Y+ D+ G ++A+ A+ + +GN ++ G P A G +VL+ Sbjct: 126 KNQDDAAAYVGSDSITSGIMEAEYAVKQLNGKGNVVILKGEPNHETAIKRTEGFKQVLQN 185 Query: 175 YVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQG 234 Y + IK++ +Q+ D W ++I EN + N K DA++A+ND A GAI AL Sbjct: 186 YPE---IKIIDEQYGD-WKRTLGMQITENWIK-NGTKFDAILANNDEMAIGAIMALKENN 240 Query: 235 LSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLN 294 L V + G DA +K + G+ +TV++ + A + A +L G++ +N Sbjct: 241 LINNVFVGGIDATPDALKLLKEGSLKVTVFQNAAGQGSEAIKAAYKLVKGEK------IN 294 Query: 295 NGLKDVPSRLLTPIDVNK 312 + VP L+ P D +K Sbjct: 295 KKIF-VPYELVVPNDADK 311 >UniRef50_Q1R0N3 Periplasmic binding protein/LacI transcriptional regulator n=49 Tax=Proteobacteria RepID=Q1R0N3_CHRSD Length = 318 Score = 77.0 bits (188), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 78/283 (27%), Positives = 124/283 (43%), Gaps = 11/283 (3%) Query: 1 MKIKNIL---LTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAK 57 MK K +L L + LL + +A K + + + ++D W + I + AE LG + Sbjct: 3 MKGKRLLIAALAVGVPLLASGASAQDKGL-MSIIVNDTSNPYWFTEGKIAEETAEKLGYE 61 Query: 58 VFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIN 117 V S G+ T+ QI+ I + +++ P N V++A + GI V + IN Sbjct: 62 ADVSSHKGDTNTESRQIDTAITNQAEAIILDPANADGSIGAVRKAVEAGIPVFIINAEIN 121 Query: 118 DADI-DFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPY 175 + + + +N + L A+ + V Y + G+P DNNA G VL Y Sbjct: 122 QQGLAEAQLVSNNAQGAALGAQQWIKSVGDSARYVELKGAPSDNNAATRSNGYETVLSQY 181 Query: 176 VDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGL 235 G KV D V W ++ L AN + ID V++ ND A GAI AL G Sbjct: 182 --PGLEKVGSD--VANWDRTQGFNKTQSMLQANPD-IDGVISGNDEMALGAISALKEAGK 236 Query: 236 SGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIA 278 V + G D ++ + AG TV +P+ + + A +A Sbjct: 237 LDDVVVGGFDGSPDAVEAVKAGEMDYTVLQPVAIFSEMAVRMA 279 >UniRef50_A6W806 Periplasmic binding protein/LacI transcriptional regulator n=9 Tax=Actinomycetales RepID=A6W806_KINRD Length = 362 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 63/217 (29%), Positives = 113/217 (52%), Gaps = 12/217 (5%) Query: 24 KEVKIGMAIDDLR--LERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRG 81 K++++G+++ D+ + ++ D + AE+ G ++ SAN + TQ SQ++ +N G Sbjct: 50 KKLRVGVSVYDMSSFITAGKEGMDAY---AEAKGIELLWNSANLDVNTQASQVDQYVNAG 106 Query: 82 VDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALV 141 VD ++++P L V AK GI +LA + +N DI + D+ GE Q + + Sbjct: 107 VDAIIVVPVQADSLQPQVASAKAAGIPLLAVNAELNSTDIAGNVQPDDVAAGEAQMQMMA 166 Query: 142 DIV-PQGNYFLMGGSPVDNNAKLFRA-GQMKVLKPYVDSGKIKVVGDQWVDGWLPENALK 199 D + +G ++ G P+ + +L R G VL Y D I+V+ + W + A+ Sbjct: 167 DAIGGKGGIVVLQG-PLGQSGELNRTKGIENVLAKYPD---IEVLAKDTAN-WKRDEAVN 221 Query: 200 IMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS 236 ++N ++A +I VVA ND GA+QAL G++ Sbjct: 222 KVKNWISAFGARITGVVAENDDMGLGALQALKESGVT 258 >UniRef50_A8F472 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Thermotoga lettingae TMO RepID=A8F472_THELT Length = 314 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 73/260 (28%), Positives = 123/260 (47%), Gaps = 22/260 (8%) Query: 70 QMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDN 129 Q++Q++ ++ +G+D LVI PY L+ + +A ++GI + DR IN + + YI+ DN Sbjct: 67 QIAQVQALLAKGIDALVINPYESAPLTPICVQAFRDGIFTIIVDRGINSEEYNVYIAGDN 126 Query: 130 EKVGELQAKALVD-IVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQW 188 G L K + + + +GN ++ G P N + A + K L+PY + +K++ Q Sbjct: 127 YMYGYLAGKYIAEKLGGKGNVVVIEGIPSTINTERVEAFK-KALEPYPN---VKIIAQQ- 181 Query: 189 VDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADL 248 W E A +IM+ LT N IDAV +D G + AL G + + G + Sbjct: 182 PGYWSREKAFEIMQTLLTKFPN-IDAVWTGDDDMLHGVLLALKQAGRDKNIVLVGGACEK 240 Query: 249 AGIKRIAAGTQTMTV---YKPITLLANTAAEIAVELGNGQEPKADTTLNNGL--KDVPSR 303 +K I G + V Y P + +TA +AV G+ NG + +P + Sbjct: 241 NIVKMIMDGHPLIGVDFTYPPNMI--STAINLAVMALKGEH-------LNGFYQRGIPRK 291 Query: 304 LLTPID-VNKNNIKDTVIKD 322 ++ + V K N KD + Sbjct: 292 IILSTETVTKENAKDYYFPE 311 >UniRef50_A8GD77 Periplasmic binding protein/LacI transcriptional regulator n=11 Tax=Proteobacteria RepID=A8GD77_SERP5 Length = 305 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 76/269 (28%), Positives = 128/269 (47%), Gaps = 17/269 (6%) Query: 49 KKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIK 108 K+A++ G V + A G+ Q Q++N I+ GVD +++ P N + K + GI Sbjct: 45 KEAKARGISVQFEDARGDVGRQADQVQNFISAGVDAIIVDPVNSAGTPAITKMVTKAGIP 104 Query: 109 VLAYDRMINDADID---FYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLF 164 ++ +R D+ + ++ D ++ G LQ + L + QGN +M G+ D A Sbjct: 105 LVYVNRTPGDSKLPAGVVFVGSDEKQSGTLQMEELARLANYQGNVAVMIGNLTDAGALQR 164 Query: 165 RAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAG 224 +V+ Y K+KVV Q + + + +M N +T N ID V A+ND A Sbjct: 165 TKDVEQVVAKY---PKMKVVQKQSAN-YSRSEGMDLMLNWIT-NGESIDIVAANNDEMAI 219 Query: 225 GAIQALSAQGLSG-KVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGN 283 GAI AL G G KV + G DA G+K +++G +TV++ + ++A + Sbjct: 220 GAIMALQQAGKQGSKVLVGGIDATPDGLKALSSGKMQVTVFQDAVGQGKASVDVAQRMIK 279 Query: 284 GQEPKADTTLNNGLKDVPSRLLTPIDVNK 312 G+ K D +P L+TP ++ K Sbjct: 280 GE--KLDPYYW-----IPFELVTPANMQK 301 >UniRef50_A6UE72 Monosaccharide-transporting ATPase n=13 Tax=Alphaproteobacteria RepID=A6UE72_SINMW Length = 310 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 66/262 (25%), Positives = 125/262 (47%), Gaps = 17/262 (6%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFV 60 MK+ +L+ T+ +L A+ A+ KIG+A+ +L+ + + + + K A G +V V Sbjct: 1 MKLSTLLVAATTASVLALPASAAEVKKIGLAVPNLQADFFNQIKLGVEKHAREKGLEVVV 60 Query: 61 QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD 120 A + TQ+SQ+++++ + +D + IP + + A++ GI V+ DR+ A Sbjct: 61 VDAKNDTNTQVSQVQDLMIQDIDAFIYIPAGAAAAAVPTRLAREAGIPVINVDRVPEGAP 120 Query: 121 IDFYISFDNEKVGELQAKALVDIVPQGNYFLM-----GGSP-VDNNAKLFRAGQMKVLKP 174 D +I+ ++ + K +++ + G +P VD RA Sbjct: 121 GDTFIAGESVESAYAVCKFIIEKAGGSGKMAIIHGQKGTTPEVDRFTGCKRA-------- 172 Query: 175 YVDSGK-IKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQ 233 +D K ++++ QW + W + I +N L AN + I + D A GA +A+ Sbjct: 173 -IDENKGVELIDQQWSNMWSADEGFSIAQNMLQANPD-ITIIFGQADGLAMGAAKAVDVA 230 Query: 234 GLSGKVAISGQDADLAGIKRIA 255 LS KV I G D D++ ++ +A Sbjct: 231 NLSDKVIIGGYDGDVSALEYLA 252 >UniRef50_Q03CA2 ABC-type sugar transport system, periplasmic component n=14 Tax=Lactobacillus RepID=Q03CA2_LACC3 Length = 319 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 78/294 (26%), Positives = 131/294 (44%), Gaps = 25/294 (8%) Query: 24 KEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVD 83 K++K+G+++ L + R+ A+ V V A + Q S IE++I + VD Sbjct: 46 KDLKVGVSLSTLSNPFFVSVRNGIQDLAKKNKTNVQVSDAQNDTAKQNSNIEDLIQKKVD 105 Query: 84 VLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDI 143 VL+I P + ++ VK+A GI V+ DR + + ++ ++ K G++ AK +++ Sbjct: 106 VLIINPVDSSAITPAVKDANDAGIPVITVDRSSDGGKVLTLVASNSTKGGQMAAKYMIEK 165 Query: 144 VPQGNYF-----LMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENAL 198 + + + G S K F GK+ +V Q G+ L Sbjct: 166 LGKDAKIAELQGIPGASATRERGKGFDGAA---------KGKLDIVSKQTA-GFDRAKGL 215 Query: 199 KIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGT 258 + EN L N + I + + ND A GA+QA+ A G K+ I G D + GIK + AG Sbjct: 216 TVTENILQGNGD-IVGIFSQNDEMALGAVQAVKAAGK--KITIVGFDGEADGIKAVKAGD 272 Query: 259 QTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNK 312 TV + + A + A + NG+ K + + P L+T D NK Sbjct: 273 MAATVAQKPEEMGRLALQAAYDHFNGKTVKKNV-------ESPLSLVTTEDANK 319 >UniRef50_B1KZY7 D-ribose-binding protein n=3 Tax=Clostridium botulinum RepID=B1KZY7_CLOBM Length = 336 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 77/257 (29%), Positives = 123/257 (47%), Gaps = 37/257 (14%) Query: 2 KIKNILLTLCTSLL-----LTNVAAH----------AKEVKIGMAIDDLR------LERW 40 K K IL L ++LL LT + KEV +G+++ L +E+ Sbjct: 3 KTKKILAVLLSTLLIGSAILTGCGSKESSVDKKDKDPKEVTVGLSLSSLSNAFFIGMEKG 62 Query: 41 QKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVK 100 KD K +G K+ +ANG+ Q+S IE++I + VD+L++ + + VK Sbjct: 63 VKD------KTSEIGCKLIETNANGDIAKQLSDIEDLITKKVDILIVNALDADAIVPAVK 116 Query: 101 EAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQA----KALVDI-VPQGNYFLMGGS 155 +AK+ I ++ DR N D+ ++ DN K+GE A KAL D + GN + G Sbjct: 117 KAKEANIPIIFLDRGANSEDMTTFLETDNVKMGEQAAELILKALKDKGLNGGNVVEIEGL 176 Query: 156 PVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAV 215 + A+ G V+ + + +K+V Q D + E ++ +M+N L A N KIDAV Sbjct: 177 QGTSAARDRGKGFHNVMDKHKE---VKIVAKQAGD-FNQEKSMNVMQNILQA-NPKIDAV 231 Query: 216 VASNDATAGGAIQALSA 232 ND GA +A+ A Sbjct: 232 FGHNDDCTVGAEKAIIA 248 >UniRef50_C5VEK6 D-ribose-binding periplasmic protein n=3 Tax=Corynebacterium matruchotii RepID=C5VEK6_9CORY Length = 325 Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 61/191 (31%), Positives = 99/191 (51%), Gaps = 6/191 (3%) Query: 44 RDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAK 103 R+ KKA+ LG + Q A + TQ +Q+ N G V++I P + ++ V++ Sbjct: 66 RESAQKKADELGLAINFQDAADDSATQSNQLANAAASGTGVVIINPTDSDAMAPAVQQLV 125 Query: 104 QEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAK 162 E I V+A DR +N+A++ YI+ DNE G+ AK L D + +G ++ G + ++ Sbjct: 126 DEKIPVVAVDRAVNNANVASYIASDNETGGKQAAKVLSDAINGEGEILVLQGKTGSSASR 185 Query: 163 LFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDAT 222 G + LK D+ IKVV Q + + L + N L A+ N + A+ A ND Sbjct: 186 ERGKGFDEGLK---DNPNIKVVAKQTAE-FERAKGLDVTTNLLQAHPN-VKAIFAENDEM 240 Query: 223 AGGAIQALSAQ 233 A GAI+AL ++ Sbjct: 241 ALGAIEALGSK 251 >UniRef50_A9HN30 Periplasmic binding protein/LacI transcriptional regulator n=4 Tax=Alphaproteobacteria RepID=A9HN30_GLUDA Length = 335 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 65/241 (26%), Positives = 102/241 (42%), Gaps = 26/241 (10%) Query: 34 DLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQ 93 D L+R K+ F K+ + N+ TQ+SQ+EN + + VD+L + + Sbjct: 68 DHELQRLVKNYPQF---------KLVIADGQANDNTQVSQVENFLTQQVDILFVSAFEAA 118 Query: 94 VLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVPQGNYF--- 150 L+ V +GI V+ DR ++S DN + ++P G Sbjct: 119 PLTPAVSAVYDKGIPVIELDRRTTGEKFTSFVSGDNRAIAHEAGLYAASLLPDGGDVAIL 178 Query: 151 --LMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTAN 208 L SP + F+AG + K+K++ Q VD W+ + A+++ L A+ Sbjct: 179 EGLPSSSPAIERLEGFKAG-------ISTNPKVKIIAVQPVD-WMQDKAVEVFSAMLQAH 230 Query: 209 NNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQD---ADLAGIKRIAAGTQTMTVYK 265 + I V SND A GA A+ G G+V I G D GI+ +A G T T Sbjct: 231 PD-IKLVYTSNDLAAAGAYIAVKQAGKLGQVKIIGTDGLPGPSGGIRAVAEGQWTATYVY 289 Query: 266 P 266 P Sbjct: 290 P 290 >UniRef50_Q98J19 Ribose-binding protein of ribose ABC transporter n=4 Tax=Alphaproteobacteria RepID=Q98J19_RHILO Length = 335 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 83/271 (30%), Positives = 129/271 (47%), Gaps = 21/271 (7%) Query: 50 KAESLGAKVFVQSANG-NEET-QMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGI 107 KAE+ V + ++G N T Q + IE + + V+ +VI P + L+ ++EA + G+ Sbjct: 71 KAEAQAQGVNLTESDGQNSATKQTADIEAALVQKVNAIVISPLDVNALAPAIEEAVKAGV 130 Query: 108 KVLAYDRMINDAD-IDFYISFDNEKVGELQAKALVDIVPQG-NYFLMGGSPVDNNAKLFR 165 V+ DR ++ I ++ DN K GE +A A+V P G F + G P A Sbjct: 131 PVVTIDRRVDGVQGILAHVGADNVKGGEAEASAMVAAFPNGAKLFHLQGQPGAGPAIDRN 190 Query: 166 AGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGG 225 G VL P D K +++ +Q + + AL + E L AN K DA++ +ND A G Sbjct: 191 KGVHNVLDPLKD--KYQIIFEQTAN-FARAEALSVTEAGLAANG-KPDAIICANDDMALG 246 Query: 226 AIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELG-NG 284 A++A +A+ + V I G DA + + G TV + + TA +IAV N Sbjct: 247 ALEACAARNFT-DVKIYGFDALPEALVAVRDGKLAGTVEQFPGQQSRTAVQIAVAYAKNK 305 Query: 285 QEPKADTTLNNGLKDVPSRLLTPIDVNKNNI 315 EPK LLTPI + K+N+ Sbjct: 306 TEPKEKLV-----------LLTPIVIGKDNL 325 >UniRef50_C6QL47 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Geobacillus RepID=C6QL47_9BACI Length = 340 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 66/232 (28%), Positives = 120/232 (51%), Gaps = 10/232 (4%) Query: 58 VFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIN 117 ++V + N + Q+SQ+EN I + VD +V+IP + +V +A Q I ++ +R+ + Sbjct: 91 IYVDAMN-DASKQLSQVENFIQQKVDAIVLIPVDTVSAPEMVDKANQANIPIVVVNRIFD 149 Query: 118 DAD-IDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRA-GQMKVLKP 174 D Y+ ++ K G +Q + + ++ +G +M G + + A++ R G +V+K Sbjct: 150 GVDKATAYVGSESIKAGIMQMEEVAKLLNGKGKIAIMNGQ-MGHEAQIKRTEGNKQVIKK 208 Query: 175 YVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQG 234 Y D +KVV + + W + +MEN L + KIDAVV +ND A GAI AL +G Sbjct: 209 YPD---MKVVLEGTAE-WDRAKGMSLMENWLQSGK-KIDAVVCNNDEMAIGAIMALEDEG 263 Query: 235 LSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQE 286 V ++G DA ++ + G +TV++ E+A++ G++ Sbjct: 264 KLDDVIVAGVDATPDALEYVKEGKLKVTVFQNAKGQGQLGLEVAIKAAKGEK 315 >UniRef50_Q9KAG4 Sugar ABC transporter (Sugar-binding protein) n=1 Tax=Bacillus halodurans RepID=Q9KAG4_BACHD Length = 323 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 71/262 (27%), Positives = 134/262 (51%), Gaps = 18/262 (6%) Query: 59 FVQSANGNEETQ-MSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIN 117 F+ S N+ TQ M+Q+EN I+R VD +++ P + ++V GI ++ +R + Sbjct: 75 FIFSDAQNDSTQQMAQVENFISRNVDAIIVNPVDTTSAVDIVNMVNDAGIPIIIANRTFD 134 Query: 118 DAD-IDFYISFDNEKVGELQAKALVDIVP-QGNYFLMGGSPVDNNAKLFRA-GQMKVLKP 174 D ++ ++ + G LQ + + ++ +GN +M G + + A++ R G ++++ Sbjct: 135 GVDQATAFVGSESIQSGLLQMEEVAKLLNNEGNIAIMDGE-LGHEAQIMRTEGNKQIIEE 193 Query: 175 YVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQG 234 + D ++ + G D +++MEN L + +IDAVVA+ND A GAI AL A G Sbjct: 194 H-DGLEVVLQGTAKFD---RSEGMRLMENWLNSGT-EIDAVVANNDEMALGAILALEAVG 248 Query: 235 LSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLN 294 V ++G DA A ++ + G +TV++ T+ ++AV+ NG++ + Sbjct: 249 KLDDVIVAGIDATPAALEAMKEGKLDVTVFQDAKGQGATSVKVAVQAANGEDVEDAM--- 305 Query: 295 NGLKDVPSRLLTPIDVNKNNIK 316 +P L+TP +V + K Sbjct: 306 -----IPYELVTPENVEEYEAK 322 >UniRef50_C7G6J4 Putative galactose ABC transporter, periplasmic galactose-binding protein n=3 Tax=Firmicutes RepID=C7G6J4_9FIRM Length = 383 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 72/257 (28%), Positives = 124/257 (48%), Gaps = 26/257 (10%) Query: 44 RDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAK 103 + V+K S V AN ++ TQ QI+N I GVDVL+I P N + + + Sbjct: 100 ENYLVEKGFSKDNITIVDGAN-DQATQTGQIDNFITEGVDVLIINPVNSSSAATITDKVV 158 Query: 104 QEGIKVLAYDR--------MINDADIDF-YISFDNEKVGELQAKAL-------VDIVPQG 147 GI ++ +R +D + D Y+ D + G Q + + VD+ G Sbjct: 159 AAGIPLVYINREPDEEEQKRWSDNNWDVTYVGCDARQSGTFQGEMISDLGLDTVDLNGNG 218 Query: 148 --NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSG-KIKVVGDQWVDGWLPENALKIMENA 204 +Y ++ G P + +A+ +K L+ D+G ++ + DQ V W + A +I+ NA Sbjct: 219 KIDYVMVEGDPENVDAQYRTEYSVKALE---DAGLEVNCLSDQ-VGNWQQDQAQQIVANA 274 Query: 205 LTANNNKIDAVVASNDATAGGAIQALSAQG--LSGKVAISGQDADLAGIKRIAAGTQTMT 262 L N ++ V +NDA A GA+QA+ + G + + + G DA ++ + AGT T T Sbjct: 275 LGQYGNDVEVVFCNNDAMALGALQAIQSAGRTVGTDIYLVGVDALSEALEDVLAGTMTGT 334 Query: 263 VYKPITLLANTAAEIAV 279 V+ +++AA+ A+ Sbjct: 335 VFNDHFSQSHSAADAAI 351 >UniRef50_P36949 D-ribose-binding protein n=274 Tax=Bacteria RepID=RBSB_BACSU Length = 305 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 74/276 (26%), Positives = 130/276 (47%), Gaps = 12/276 (4%) Query: 24 KEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVD 83 KE IG+++ L + + K+A+ G KV + A + Q S +E++I +GVD Sbjct: 36 KEFTIGLSVSTLNNPFFVSLKKGIEKEAKKRGMKVIIVDAQNDSSKQTSDVEDLIQQGVD 95 Query: 84 VLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDI 143 L+I P + +S V+ A G+ V+ DR ++ ++ DN K GE+ A + D Sbjct: 96 ALLINPTDSSAISTAVESANAVGVPVVTIDRSAEQGKVETLVASDNVKGGEMAAAFIADK 155 Query: 144 VPQGNYFL-MGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIME 202 + +G + G P + + +G + K++VV Q D + L +ME Sbjct: 156 LGKGAKVAELEGVPGASATRERGSGFHNIADQ-----KLQVVTKQSAD-FDRTKGLTVME 209 Query: 203 NALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMT 262 N L + + I AV A ND A GA++A+++ G + + G D + + I + T Sbjct: 210 NLLQGHPD-IQAVFAHNDEMALGALEAINSSG--KDILVIGFDGNKDALASIKDRKLSAT 266 Query: 263 VYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLK 298 V + L+ A E A ++ +G+ K T++ LK Sbjct: 267 VAQQPELIGKLATEAADDILHGK--KVQKTISAPLK 300 >UniRef50_A6VWF2 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Gammaproteobacteria RepID=A6VWF2_MARMS Length = 322 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 90/335 (26%), Positives = 154/335 (45%), Gaps = 29/335 (8%) Query: 1 MKIKNILLTLCT--SLLLTNVA-AHAKEVKIGMAIDDLRLERWQKDRDIFVKKAES-LGA 56 MK KN ++ L ++L V ++A + KIG+++ W + KA + L A Sbjct: 1 MKYKNKIMRLIAVFTMLFAFVGTSYAAKYKIGISVPSAD-HGWTAGLLWWANKAAADLKA 59 Query: 57 KV----FVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAY 112 K F A+ + Q+ +E+++ +G+D LVI+P+N L V++EA EGI + Sbjct: 60 KEKDIEFFVVASSSGSKQVGDVEDLMIKGIDALVILPHNPATLQKVIEEAYDEGIYTVVV 119 Query: 113 DRMINDADIDFYISFDNEKVGELQAKALV-DIVPQGNYFLMGGSPVDNNAKLFRAGQMKV 171 DR + + +I+ DN +G + A+ L ++ +GN ++ G + N + A V Sbjct: 120 DRELAHPAQNVFIAGDNAGLGRVGAQWLAKEMSGKGNVVVIEGLQIPINKQRVDAFN-DV 178 Query: 172 LKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALS 231 + Y + IK++ Q D W + AL +MEN L + KIDAV +D G ++A+ Sbjct: 179 IAGYPN---IKILDSQPGD-WSTQKALSVMENFLQ-KHPKIDAVWCQDDDMLKGVLKAIE 233 Query: 232 AQGLSGKVAISGQDADLAGIKRIAAG---TQTMTVYKPITLLANTAAEIAVELGNGQEPK 288 G + + G I+ I +G + Y P + A+ IA+ + + K Sbjct: 234 ESGRTDIKTVLGGAGSKDIIEMIQSGNKMVRATVTYSPSMI----ASGIALAVHGVKHEK 289 Query: 289 ADTTLNNGLKDVPSRLLTPID-VNKNNIKDTVIKD 322 + PSR++ D V K N D KD Sbjct: 290 LGYLYHE-----PSRVILGADLVTKENAADYYFKD 319 >UniRef50_C0C5R0 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C5R0_9CLOT Length = 382 Score = 73.9 bits (180), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 67/241 (27%), Positives = 110/241 (45%), Gaps = 29/241 (12%) Query: 52 ESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLA 111 E GA V V SA+G+ E Q +QI + I +GV+V++I + ++ +K G+KV+A Sbjct: 97 EEAGADVTVSSADGDAENQCNQIYDFIEKGVEVVLIQAADSNAVAPAIKACNDAGVKVIA 156 Query: 112 YDRMI-NDADIDFYISFDNEKVGELQAKALVD---------IVPQGNYFLMGGSPVDNNA 161 +R I D +D+ + D++ +GE+ AK + D QG +G + D+ A Sbjct: 157 VNRTIYGDCKVDYSVLIDDKAMGEMCAKYIADNSKEKDVKVTTMQGT---LGTATADDRA 213 Query: 162 KLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDA 221 + F AG V S + + D + W E A+ M + LT +++ + AV +D Sbjct: 214 EGFSAG--------VQSDGLDNIRDNPCE-WSSEKAMAAMNDVLTTDSD-VGAVFLHSDC 263 Query: 222 TAGGAIQALSAQ------GLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAA 275 G + AL+ G G V I D + + I MTV +A AA Sbjct: 264 MLAGVVSALTQSDKLKNVGEDGHVMIVSIDGAASALDYIRQDVLDMTVDNSPLAMATIAA 323 Query: 276 E 276 + Sbjct: 324 K 324 >UniRef50_D2PNL9 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Actinomycetales RepID=D2PNL9_9ACTO Length = 335 Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 75/237 (31%), Positives = 106/237 (44%), Gaps = 18/237 (7%) Query: 39 RWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNV 98 R + D DI AE +V A + Q++ +EN I + +D+L+I P + L+ V Sbjct: 61 RQRMDDDIKAAAAEVPQFEVKFADAAQDNAKQVADVENYITQQIDLLIISPNEAKPLTAV 120 Query: 99 VKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVD-IVPQGNYF-----LM 152 VK+A +GI VL DR + +I DN ++G K + + ++P G L Sbjct: 121 VKKAYDQGIPVLVLDRKVEGDAYTGFIGGDNVQIGTEAGKYVAEKVLPNGGNVVEIKGLA 180 Query: 153 GGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKI 212 G +P + F G +K + K+KVV D WL E M +AL N KI Sbjct: 181 GATPQAERNQGFATG-IKA------NPKVKVVATASGD-WLREKGQAQM-DALLKANPKI 231 Query: 213 DAVVASNDATAGGAIQALSAQGLSGKVAISGQDA---DLAGIKRIAAGTQTMTVYKP 266 D V A ND A GA A A G ++ G DA GIK + G T T P Sbjct: 232 DVVYAHNDPMAEGAYLAAKAVGREKEMKFIGIDALPIPSGGIKAVEQGRLTATFTYP 288 >UniRef50_C5EU51 D-galactose-binding periplasmic protein n=4 Tax=Clostridiales RepID=C5EU51_9FIRM Length = 350 Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 76/271 (28%), Positives = 123/271 (45%), Gaps = 26/271 (9%) Query: 57 KVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI 116 K+ + + G++ TQ SQ+E +I+ G D L I + S ++ +A G V+ ++R Sbjct: 75 KLDILDSKGSQNTQNSQVERLISLGCDALCINSVDRSSASIIIDKAMDAGTPVVFFNREP 134 Query: 117 NDADID-----FYISFDNEKVGELQAKALVDIVPQ--------GN----YFLMGGSPVDN 159 + D++ +Y+ D ++ LQ ALVD + GN Y L+ G Sbjct: 135 VEEDMNRWEKLYYVGADAKESAVLQGDALVDAYRKDSRTLDANGNGLVSYVLLEGETSHQ 194 Query: 160 NAKLFRAGQMKVLKPYVDSGKI--KVVGDQWVDGWLPENALKIMENALTANNNKIDAVVA 217 ++ + ++ LK D G K+ G + W A +ME L +I+ VV+ Sbjct: 195 DSLIRTEWSIQTLK---DGGVPLEKITGG--IANWDRSQASALMEQWLKEYPGQIELVVS 249 Query: 218 SNDATAGGAIQALSAQGL-SGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAE 276 +ND A GAI A++ G+ + + + G D GIK + GT TV A + Sbjct: 250 NNDDMALGAIDAMNRAGIGANSIKVVGIDGTPVGIKALEEGTLFATVESDKERYAQAIFD 309 Query: 277 IAVELGNGQEPKADTTLNNG-LKDVPSRLLT 306 IA L Q+PK+ L NG P R+LT Sbjct: 310 IAWSLSLDQDPKSVVPLVNGKYYWCPQRVLT 340 >UniRef50_A8S312 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S312_9CLOT Length = 346 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 73/293 (24%), Positives = 136/293 (46%), Gaps = 22/293 (7%) Query: 24 KEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVD 83 K+ IG+A++ + +D K A+ G ++++ A + QM +EN+I + D Sbjct: 64 KKYVIGLAMNTQTNPFFVDVKDGVQKAADEHGIELYITDAQDDPTIQMKDVENLITKKPD 123 Query: 84 VLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDI 143 ++I + + + ++ + GI V DR N ++ +I +D K G + + LVD Sbjct: 124 AIIIDTCDSDAIVSSIEACNEAGIPVFTMDREANGGEVISHIGYDAIKSGRMAGQYLVDT 183 Query: 144 VP--------QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPE 195 + QG +MG + N ++ F +V+K D+ +++V Q D + Sbjct: 184 LGGKGKIVEIQG---IMGTNVAQNRSQGFN----EVMK---DNPDMEIVACQVAD-FDRA 232 Query: 196 NALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIA 255 + +MEN L AN +ID + A+ND GA++A+ A G + ++ G DA + + Sbjct: 233 KGMSVMENILQANP-EIDGLYAANDEMLLGALEAMEAAGRTDEIVKIGCDAIDDTLDAMK 291 Query: 256 AGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGL--KDVPSRLLT 306 AG T+ +P L A + G++ + L+N L +D L+T Sbjct: 292 AGKVDATIAEPPFFLGKAILNTAYDYLEGKQVEPYVILDNQLVTQDTVDSLVT 344 >UniRef50_A1WJI7 Periplasmic binding protein/LacI transcriptional regulator n=102 Tax=Proteobacteria RepID=A1WJI7_VEREI Length = 358 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 57/192 (29%), Positives = 103/192 (53%), Gaps = 8/192 (4%) Query: 69 TQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFD 128 TQ +Q E MI + D ++ +P + Q ++ V +A + I V+ + +N + Y+ + Sbjct: 98 TQNNQFETMITQKYDGILFVPIDLQAGADAVSKAAEANIPVVGSNGRVNSDKLLSYVGSN 157 Query: 129 NEKVGELQAKALVDIVP-QGNYFLMGGSPVDNNAKL-FRAGQMKVLKPYVDSGKIKVVGD 186 + G +QA+A+VD + +GN ++ G P+ + ++ R G + VL Y + +KV+ + Sbjct: 158 DVIAGAMQAQAVVDAMGGKGNVVILEG-PIGQSGQVERRQGNLSVLAKYPN---VKVL-E 212 Query: 187 QWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGK-VAISGQD 245 W AL + EN LTA+ KI+ ++ ND A GAI+A+ A+GL K + +G D Sbjct: 213 MKTANWSRAEALSLTENWLTAHAGKINGIIGQNDEMALGAIEAVKAKGLDPKTIPTAGID 272 Query: 246 ADLAGIKRIAAG 257 ++ + AG Sbjct: 273 GVSDAVRAVKAG 284 >UniRef50_A1R5X6 D-ribose-binding protein n=1 Tax=Arthrobacter aurescens TC1 RepID=A1R5X6_ARTAT Length = 328 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 78/281 (27%), Positives = 131/281 (46%), Gaps = 22/281 (7%) Query: 50 KAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKV 109 KA+ LG +V V A G+ TQ+SQI++ + +GVD +V+ P N L V+ G V Sbjct: 62 KAKELGVEVTVLDAKGDSSTQISQIQDQLAQGVDGIVLSPNNSAELVPGVQMIHDAGKTV 121 Query: 110 LAYDRMINDADIDFYISFDNEKVGELQAKALVDIVPQ-GNYFLMGGSPVDNNAKLFRAGQ 168 D +I D ++FDNEK G+L A+AL ++ + G G+ +A L G Sbjct: 122 TTVDSVIPGDIADAAVAFDNEKAGKLGAEALAKLMGEKGTVLEYQGAKGAYHAILRGKGF 181 Query: 169 MKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQ 228 +K + IKV+G W +NAL + + TA+++ I+ + + ND G + Sbjct: 182 NDGIKQFP---GIKVIGRDAQ--WTADNALSLTVDNFTADSS-INGLFSHNDEMVRGIVS 235 Query: 229 ALS------AQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELG 282 LS G + + + G D + RI G Q T+ + + A + V+L Sbjct: 236 GLSQINKDAPVGAANHIPLVGVDGTPLALDRIRNGVQDATMDQNPFEMGALALQAQVDLL 295 Query: 283 NGQE-PKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTVIKD 322 +G++ PK T ++L+T +V+ + + KD Sbjct: 296 DGKQVPKMQLT--------DTKLITKENVDDPTLWGNIFKD 328 >UniRef50_Q2SMT1 ABC-type sugar transport system, periplasmic component n=12 Tax=Proteobacteria RepID=Q2SMT1_HAHCH Length = 309 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 86/322 (26%), Positives = 150/322 (46%), Gaps = 38/322 (11%) Query: 7 LLTLCTSLLLTNVAAHAKEVKIGMAIDD------LR--LERWQKDRDIFVKKAESLGAKV 58 L L +++ +VAA ++ + MA+ D LR +E KD+ V Sbjct: 6 LSVLASAMFAGSVAAADLKIGVSMAVFDDNFLTALRNGIETAAKDK------------SV 53 Query: 59 FVQSANGNEE--TQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRM- 115 VQ +G E TQ++QI+N I GVD +++ P + ++ +A+ GI ++ +R Sbjct: 54 DVQIEDGKNEVGTQLNQIQNFIASGVDAIIVNPVDTDATVSISSDAEAAGIPLIYVNRQP 113 Query: 116 --IND-ADIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKV 171 +N D +++ + E G LQ + + ++ +GN +M G + N A + R + Sbjct: 114 INVNQLPDNQAFVASNEEVSGTLQTEEVCRLLGGKGNVVVMMGE-LSNQAAIQRTKDIHD 172 Query: 172 LKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALS 231 + + +KVV +Q + W +M N L+A + DAV+++ND A GAIQAL Sbjct: 173 VIKRKECSGMKVVAEQTAE-WSRLKGNDLMTNWLSA-GLEFDAVISNNDEMAIGAIQALK 230 Query: 232 AQGLS-GKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKAD 290 A G V ++G DA + + +G +TV++ A + AV L G+ Sbjct: 231 ASGRKMDSVVVAGIDATPDALAAMKSGDLDVTVFQSAKGQGAGAVDAAVRLAKGENVDQK 290 Query: 291 TTLNNGLKDVPSRLLTPIDVNK 312 VP L+TP +++K Sbjct: 291 VW-------VPFELVTPANLDK 305 >UniRef50_C9LWW5 Sugar ABC transporter, periplasmic sugar-binding protein n=2 Tax=Selenomonas RepID=C9LWW5_9FIRM Length = 347 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 64/223 (28%), Positives = 109/223 (48%), Gaps = 10/223 (4%) Query: 44 RDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAK 103 ++ F +KA+S G V A G+ Q+ Q+ I+ +V++ +G + V++A+ Sbjct: 87 KNTFAEKAKSAGLDVEFLDAKGDSNLQIDQLNEAISNKAAAIVLLAMDGTSIVPTVEKAR 146 Query: 104 QEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVPQGN--YFLMGGSPVDNNA 161 + GI V+ +R +ND + +S D+ + G +Q + + +P +LMG S + Sbjct: 147 EAGIPVVIMNRDVNDPKVIGSLS-DDREAGRMQGEFMASHLPPNAKVVYLMGESSLSVAV 205 Query: 162 KLFRAGQMKVLKPYVDSGKIKVVGDQWVDG-WLPENALKIMENALTANNNKIDAVVASND 220 K + + L D +K++ VDG W +K M L+ +I+ VVA+ND Sbjct: 206 KRWEGFKEACLDKRPD---VKLLAS--VDGSWSKAEGMKAMTLWLSF-FPEINGVVAAND 259 Query: 221 ATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTV 263 A GAIQAL A ++G DA AG+ + AG + TV Sbjct: 260 EMALGAIQALKAANRLNGCLVTGVDATPAGLAAVEAGELSQTV 302 >UniRef50_B0PGZ6 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGZ6_9FIRM Length = 374 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 65/250 (26%), Positives = 123/250 (49%), Gaps = 15/250 (6%) Query: 49 KKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIK 108 K AE G +V +SA+GN + Q+S IEN I +GVD +++ P + + L V+++A GI Sbjct: 83 KAAEDYGCEVIWKSADGNFDNQISLIENFIEQGVDCILVDPLDSEGLKPVIEKASAAGIP 142 Query: 109 VLAYDRMINDADIDFYISFDNEK----VGELQAKALVDIVPQGNYFLMGGSPVDNNAKLF 164 + + D + ++ +++E+ + E+ AK + + +G L+ G+ + + L Sbjct: 143 TITMAGQV-DVETNYTTVYNDEENTRIIAEMTAKMIGE---EGKTALLYGNKGNLVSDLR 198 Query: 165 RAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAG 224 + G ++ Y + I VV + W P +K ++ L A N + A+ +DA Sbjct: 199 QKGYYAGMEKYPN---ITVV--EQPTNWDPPTGMKAAQD-LIAANPDLKAIHCISDAVTL 252 Query: 225 GAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNG 284 A QA+ G G++ ++ D + +K + +G T TV ++A++L +G Sbjct: 253 AAYQAVKTAGKEGEIIVTSYDGNDDALKAVESGQFTSTVLTGAKKTGYWNIQVALQLASG 312 Query: 285 QEPKADTTLN 294 P A+ LN Sbjct: 313 VRP-AEKILN 321 >UniRef50_B3T6P5 Putative periplasmic binding protein and sugar binding domain of the LacI family protein n=1 Tax=uncultured marine microorganism HF4000_APKG2K17 RepID=B3T6P5_9ZZZZ Length = 302 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 73/248 (29%), Positives = 117/248 (47%), Gaps = 12/248 (4%) Query: 49 KKAESLGAKVFVQSA--NGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEG 106 +KA LG K+ V S + ++Q++Q+E+ I +GV + I + L+ V++ A+ G Sbjct: 48 EKAAELGVKIVVLSPPQESDVQSQINQVEDQITKGVTAIAIAVTDPNALAKVIESARSAG 107 Query: 107 IKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVPQG-NYFLMGGSPVDNNAKLFR 165 I V+ D + + F I DN+ ++ A + D V +G + ++ G + K Sbjct: 108 IPVVFIDTKGINKGVTF-IGTDNKAGAKMAADFICDRVSRGSDVAILQGIITQSTGKARA 166 Query: 166 AGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGG 225 G LK + +V +Q + W +MEN LT N K+ AV ASND A G Sbjct: 167 DGAHAGLK----GCGLNIVAEQPAN-WDRAQGRTVMENILT-RNQKLKAVFASNDNMALG 220 Query: 226 AIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQ 285 A++AL + V + G DA+ K I AG T T+ + + E A+EL G+ Sbjct: 221 AVEALKDADMLNDVIVVGFDANPDAAKSILAGEMTATIAQFSYNMGAYGVEKALELAKGR 280 Query: 286 E--PKADT 291 P DT Sbjct: 281 SLPPVVDT 288 >UniRef50_Q9K631 Rhizopine ABC transporter (Rhizopine-binding protein) n=1 Tax=Bacillus halodurans RepID=Q9K631_BACHD Length = 327 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 79/337 (23%), Positives = 152/337 (45%), Gaps = 48/337 (14%) Query: 2 KIKNILLTLCTSLLLTNVAAHAKE---------------VKIGMAIDDLRLERWQKDRDI 46 K+ L+ C S LL A+ + E + IG A D D+ Sbjct: 7 KVAVALIIYCLSFLLVGCASDSDEQMGTESVNKAGDDGKMVIGFAHPDFN--------DM 58 Query: 47 FV---------KKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSN 97 F+ +AE +V A + + Q++Q+E++I +GVD ++ IP + Sbjct: 59 FLGFLLAGVQAYEAEQTNVEVVYVDAENDSDGQIAQVEDLIAQGVDAIMAIPVDLIATEF 118 Query: 98 VVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVP-QGNYFLMGGSP 156 +V A+Q G+ V+ +R + + D Y+ D+ + G +Q + + ++ +G +M G Sbjct: 119 IVDRAQQAGVPVVLINRDSVERE-DAYVGSDSLQAGTIQMEEVAAVLKGKGKIAIMNGQ- 176 Query: 157 VDNNAKLFRA-GQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAV 215 + + A++ R G +V+ Y G V+ + GW E ++ME+ + + DAV Sbjct: 177 MGHTAQINRTLGNKQVVDQY--PGMEVVI--EGTGGWSREKGKELMESWIESGQT-FDAV 231 Query: 216 VASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAA 275 VA+ND A GAI A G+ ++ +G D + ++ G T++V++ T Sbjct: 232 VANNDEMAIGAIMAAEEAGIVDELVFAGIDGTPDALDYMSKGKLTISVFQDAKGQGQTGL 291 Query: 276 EIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNK 312 E A++L G+ + + ++P +T +V++ Sbjct: 292 EQAIKLAKGESAEK-------MTNIPYETITKRNVDE 321 >UniRef50_C8Q2Z4 Sugar ABC transporter, periplasmic sugar-binding protein n=1 Tax=Pantoea sp. At-9b RepID=C8Q2Z4_9ENTR Length = 308 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 81/303 (26%), Positives = 147/303 (48%), Gaps = 35/303 (11%) Query: 26 VKIGMAI---DDLRLERWQKDRDIFVKKAESLGAKVF-VQSANGNEETQMSQIENMINRG 81 +++G++I DD+ L R R ++ A+ + G + Q+SQ+++ IN Sbjct: 21 IQVGVSIAQMDDVFLSRL---RGYLIEHAKQYPDMTLQFEDGQGAVDKQLSQVQSFINGK 77 Query: 82 VDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADID---FYISFDNEKVGELQAK 138 VDV+++ P + Q N+ A++ + ++ +RM +D+ + YI D + G LQ Sbjct: 78 VDVIIVNPVDTQGTKNMSDAARKAKVPLIYLNRMPSDSKMGDGISYIGSDEIEAGRLQMG 137 Query: 139 ALVDIVPQG---NYFLMGGSPVDNNAKLFRA-GQMKVLKPYVDSGKIKVVGDQWVDGWLP 194 L D+V N +M G + N+A FR G +V+ + + + VV + W+ Sbjct: 138 YLADMVKDRKNVNIAIMKGL-LSNDATRFRTQGAKEVIAKHPN---MHVVMEDTAK-WMR 192 Query: 195 ENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS-GK-VAISGQDADLAGIK 252 E+ + +M N + KID + A+ D A GA A+ + GL+ GK + + G D G++ Sbjct: 193 EDGMNLMNNWILT-GQKIDILSANADEMAIGAAMAIKSNGLNIGKDILVGGTDGGPNGLQ 251 Query: 253 RIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKD---VPSRLLTPID 309 I +G T+TV++ A A ++A + G+ LKD +P +L+TP + Sbjct: 252 AIKSGLLTVTVFQDAKSQAFGAIDMAEKAAKGET----------LKDINFIPFQLVTPQN 301 Query: 310 VNK 312 K Sbjct: 302 YQK 304 >UniRef50_C5VG88 Sensor protein n=2 Tax=Prevotella RepID=C5VG88_9BACT Length = 878 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 69/248 (27%), Positives = 118/248 (47%), Gaps = 7/248 (2%) Query: 1 MKIKNILLTLCTSLLLTNVA-AHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVF 59 M++K L L +LL + + + K+ IG++ + R + + ++ + + + Sbjct: 1 MQMKQWLYILIFTLLFSACSDNNVKKYVIGVSQCSEDIWRDKLNNELVMSTYQHDNVTLK 60 Query: 60 VQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDA 119 SAN N+ Q QIE I GV++L++ P +S+V+ +A GI V+ +DR + Sbjct: 61 FASANDNDRLQKQQIEQFIKEGVNLLIVSPNQIHTISSVIDKAYDAGIPVILFDRKTDSK 120 Query: 120 DIDFYISFDNEKVG-ELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDS 178 +I DN + G E+ + +GN + G + A G M LK Y S Sbjct: 121 KYTAFIGADNYEAGYEIGNFIGQQLDGKGNIAEICGLQASSPAIERNRGFMDALKDY--S 178 Query: 179 GKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGK 238 G IKV+ + D W+ E+ + M++ L+ I V A ND A GA+Q++ + G Sbjct: 179 G-IKVIARKHGD-WVKESGVMAMDSVLSQAKEPIQYVFAQNDRMALGALQSIKKHKVKG- 235 Query: 239 VAISGQDA 246 + I G DA Sbjct: 236 IRIVGIDA 243 >UniRef50_A8RW63 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RW63_9CLOT Length = 375 Score = 70.9 bits (172), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 66/232 (28%), Positives = 113/232 (48%), Gaps = 17/232 (7%) Query: 50 KAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKV 109 +AE G K+ V A N Q+S +E++I + +D+L++ P + L ++ AK+ + V Sbjct: 113 EAEKRGFKLIVTDAQDNTAKQVSDVEDLIAQNIDLLILSPREFEGLETALQTAKENSVPV 172 Query: 110 LAYDRMI-NDADIDF--YISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFR 165 + DR+ +A +D+ YI+ D G+ + L D N + G+ ++A+ Sbjct: 173 ILVDRLAKGEAGVDYVTYIATDFVWEGQAAGEWLKDKTGGTCNIIELTGTVGSSSAQDRA 232 Query: 166 AGQMKVLKPYVDSGK-IKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAG 224 G V VD + +K++ Q + K+MEN L A+ ++DAV ND A Sbjct: 233 TGFAGV----VDQNEGMKIIASQ-TGNFERSEGQKVMENLLQAHGGEVDAVFCHNDQMAL 287 Query: 225 GAIQALSAQGL--SGKVAISGQDADLAGIKRIAAGTQTMTV-----YKPITL 269 GA+QA+ A G + + + G D ++ K + AG + TV Y PIT Sbjct: 288 GAVQAIKAAGYKPNEDILVIGIDGEMDSFKSVIAGEMSATVVSSPMYGPITF 339 >UniRef50_C6CIQ9 Periplasmic binding protein/LacI transcriptional regulator n=37 Tax=Gammaproteobacteria RepID=C6CIQ9_DICZE Length = 312 Score = 70.5 bits (171), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 64/256 (25%), Positives = 117/256 (45%), Gaps = 5/256 (1%) Query: 4 KNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSA 63 K +L + +++ A A+ +I + +L + + VK A+ LG + V + Sbjct: 3 KITILAAAMAFTMSSGLAQAQNEQIVFSTPNLAMPFEVHMQRTAVKAAKELGVNLQVLDS 62 Query: 64 NGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDF 123 G+ Q++ +EN I RG V+ P + +S V E + + V+ DR + Sbjct: 63 QGSSPKQVADLENAITRGAQGFVVSPNDVNAVSGAVTEIQDAKLPVVTLDRSVKTDKKVP 122 Query: 124 YISFDNEKVGELQAKALVDIVPQG-NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIK 182 + +N K G+ + P G + L+ G P ++ G LK K + Sbjct: 123 HFGANNYKGGQAIGDFVKARFPNGADIVLLTGQPGSSSNIERTQGIRDSLK--AGGSKYR 180 Query: 183 VVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGL-SGKVAI 241 +V DQ W+ ++I+E+ L + + ++++ND A GAI+AL +QGL G+V + Sbjct: 181 LVADQ-TGNWMRSEGMRIVESVLPSLPKRPQVILSANDDMALGAIEALQSQGLKPGEVMV 239 Query: 242 SGQDADLAGIKRIAAG 257 +G DA + R+ G Sbjct: 240 TGFDAVPEALARVRDG 255 >UniRef50_C3MI72 Putative ribose ABC transporter, ribose-binding protein n=1 Tax=Rhizobium sp. NGR234 RepID=C3MI72_RHISN Length = 367 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 59/200 (29%), Positives = 96/200 (48%), Gaps = 13/200 (6%) Query: 51 AESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVL 110 AE++ V S+ + Q+ +E IN G+D + + YN L ++ A + GI V Sbjct: 101 AEAIELLVQAPSSQSATDDQIRAMEAWINDGIDAIAVALYNEGALLPSIRRATEAGIPVF 160 Query: 111 AYDRMINDADIDFYIS---FDNEKVGELQAKALVDIV--PQGNYFLMGGSPVDNNAKLFR 165 ++ AD +Y+S +D G QA+ +VD + ++ G P + ++ + Sbjct: 161 LFNSPF--ADNPYYVSDVGYDQSDGGRAQAQWIVDTYGDKEVKIGILEGLPGPHTSQRMK 218 Query: 166 AGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGG 225 + K K+V Q GW+ L + EN TAN + I+ +VA D A G Sbjct: 219 GFNEIISK----HPNFKIVAQQPA-GWVRAQGLSVTENMFTANPD-IEVLVALYDEMALG 272 Query: 226 AIQALSAQGLSGKVAISGQD 245 +QAL A+GL+GKVAI G + Sbjct: 273 GLQALKAKGLNGKVAIVGYE 292 >UniRef50_C6AR66 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM1325 RepID=C6AR66_RHILS Length = 333 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 63/228 (27%), Positives = 109/228 (47%), Gaps = 15/228 (6%) Query: 44 RDIFVKKAESLGAKVF------VQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSN 97 R+ K+ ++ A+ F V +A G Q+S +E+++ +G+ VL+I + ++ Sbjct: 44 RNTMTKRNQAYAAEHFKDVDLIVTNAEGKSAKQISDVESLMVQGMKVLMISAQDSAAIAP 103 Query: 98 VVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVP-QGNYFLMGGSP 156 +K+ GI V+ +R + D + ++ N+ +G L K + + + +GN + G P Sbjct: 104 TIKQVLAAGIPVITLERSL-DIPVTLHVGPHNKPIGTLAGKYIAEALKGKGNVVEIKGDP 162 Query: 157 VDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTA-NNNKIDAV 215 A G + +IKV+ + D W E ALK ME+ L +I AV Sbjct: 163 AVAPAVERHEG----FAEAIAGTEIKVIAETHAD-WDQEKALKFMEDTLQRFPAGQIQAV 217 Query: 216 VASNDATAGGAIQALSAQGLSGK-VAISGQDADLAGIKRIAAGTQTMT 262 A ND A GA++A+ A G + + I G D + A I+ +A G T T Sbjct: 218 YAHNDNMAFGALRAIQAAGRDKEGILIIGIDGENAAIRAVAKGDLTAT 265 >UniRef50_Q7MEU9 ABC-type sugar transport system, periplasmic component n=13 Tax=Bacteria RepID=Q7MEU9_VIBVY Length = 292 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 75/283 (26%), Positives = 132/283 (46%), Gaps = 11/283 (3%) Query: 7 LLTLCTSLLLTNVAAHAKEVKIGMAI--DDLRLERWQKDRDIFVKKAESLGAKVFVQSAN 64 L TL ++ LLT+ + + + MAI L + +D +A+ LG + V + Sbjct: 4 LATLISAALLTSTVSLGAQAQDTMAIVVSTLNNPFFVTMKDGAETRAKELGYNLIVLDSQ 63 Query: 65 GNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFY 124 + ++S +E++ RGV ++I P + +SN ++ A + I VL DR + D+ + Sbjct: 64 NDPSKELSNVEDLTIRGVKAILINPTDSDAVSNAIRIANRSKIPVLTLDRGASRGDVVSH 123 Query: 125 ISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKV 183 I+ DN GE+ +V+ V + + G + A+ G M +K +++ Sbjct: 124 IASDNVVGGEMAGNFIVEKVGEKAKVIQLEGIAGTSAARERGEGFMNAVK----GSHMEL 179 Query: 184 VGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISG 243 + Q D + L +MEN L AN + + AV A ND A GA++A+ A G +V I G Sbjct: 180 LASQPAD-FDRTKGLNVMENLLAANPD-VQAVFAQNDEMALGALRAIQASG--KEVMIVG 235 Query: 244 QDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQE 286 D GI + G T+ + L+ E A ++ G++ Sbjct: 236 FDGTDDGIAAVNRGKLAATIAQQPDLIGALGIETADKVLKGEQ 278 >UniRef50_A6E6Q9 Sensor protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6E6Q9_9SPHI Length = 918 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 93/197 (47%), Gaps = 14/197 (7%) Query: 55 GAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDR 114 GAK+ A+ N TQ+ Q++ M+++G+D+L+I P + L+ +V++ +GI V+ DR Sbjct: 59 GAKLVYADADNNSNTQIKQVKEMLDQGIDLLIISPNEAKPLTEIVEQTYSDGIPVIVIDR 118 Query: 115 MINDADIDFYISFDNEKVGELQAKALVDIV--PQGNYFLM---GGSPVDNNAKLFRAGQM 169 Y+ DN ++G + ++ L + + P +M G SP K F G Sbjct: 119 KTTSNLYTCYVGADNYQIGYMASQYLGNTISGPANILEVMGLPGSSPTIERNKGFNDGLK 178 Query: 170 KVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQA 229 K + S +V GD W+ NA + + + ++ N ID V A ND A A Sbjct: 179 KFPNLKIKS---QVYGD-----WMKPNAERQL-SKISDQLNDIDVVFAHNDNMAFAAQSV 229 Query: 230 LSAQGLSGKVAISGQDA 246 G++ + G DA Sbjct: 230 FKKLGIASQAKFIGIDA 246 >UniRef50_B9JQE2 D-ribose-binding periplasmic protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JQE2_AGRRK Length = 334 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 69/278 (24%), Positives = 129/278 (46%), Gaps = 18/278 (6%) Query: 24 KEVKIGMAIDDLRLER---WQKDRDIFVKKAESLG---AKVFVQSANGNEETQMSQIENM 77 K VK+G A+ L+ E W + +KK + A++ V N + TQ SQ + M Sbjct: 30 KPVKVGAAVYGLKNEYAQIWAAE----IKKHPAFANGIAELTVFDGNYDHATQASQFDLM 85 Query: 78 INRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQA 137 + DV + IP + V+ +A + + V+ + ++ +I D+ G+ +A Sbjct: 86 ATQHYDVAIYIPIDSYAAKGVIHKAALKNLPVVGSNGPAKSDELVSFIGSDDVAAGQYEA 145 Query: 138 KALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPEN 196 + L + +GN ++ G + +L G K L D+ K V ++ W Sbjct: 146 ETLFKAIGDKGNIVVLIGPEGNLGQELRTEGNKKAL----DANKDITVLERKTANWSRSE 201 Query: 197 ALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGK-VAISGQDADLAGIKRIA 255 A+ +M+N LT++ KI+ V+A ND GAI A+ A G+ K + + G D ++ + Sbjct: 202 AMVLMQNWLTSHKGKINGVLAQNDEMGLGAIAAMKAAGIDPKTIPVVGIDGVTDAVRAVQ 261 Query: 256 AGTQTMTVYKPITLLANTAAEIAVE--LGNGQEPKADT 291 +G +++ + A A +IA+ +G+ +P A+ Sbjct: 262 SGDMILSIRQDAQTQAQGAVDIALRRVIGDSYQPLAEC 299 >UniRef50_A4F8A2 Binding protein/LacI transcriptional regulator n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4F8A2_SACEN Length = 334 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 79/263 (30%), Positives = 116/263 (44%), Gaps = 27/263 (10%) Query: 28 IGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEET--QMSQIENMINRGVDVL 85 IGM+ +L E ++ D ++KA + VQ A+ ++ Q+S +EN + + VD+L Sbjct: 51 IGMSQANL-AEPYRVRMDEDIRKAAEKVPQFDVQFADAAKDNSKQVSDVENFMTKKVDLL 109 Query: 86 VIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVD-IV 144 +I P L++VVK+A EGI V+ DR + YI DN ++G + + ++ Sbjct: 110 MISPNEAAPLTDVVKKAYNEGIPVVVLDRKVEGEAFTTYIGADNVQIGRQAGEYFKNTLL 169 Query: 145 PQGNYF-----LMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALK 199 PQG L G +P K F G + KI+VV DG + + Sbjct: 170 PQGGKIVQLKGLSGSTPAAEREKGFMEG--------IAGSKIEVV--DTADGEWERSVGQ 219 Query: 200 IMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS--GKVAISGQDADLAGIKRIAAG 257 +AL + I AV A ND A GA A A G V I G + GIK + G Sbjct: 220 QKMDALLKAHPDIQAVYAQNDPMAEGAWLAAQAAGRKDLKFVGIDGLPIESGGIKAVEQG 279 Query: 258 TQTMTVYKPITLLANTAAEIAVE 280 + T P T E AVE Sbjct: 280 RLSATNLYP------TGGEEAVE 296 >UniRef50_A8SGU5 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SGU5_9FIRM Length = 356 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 63/239 (26%), Positives = 107/239 (44%), Gaps = 19/239 (7%) Query: 54 LGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYD 113 +G V + ++ TQ QI + +GVDVLVI P +V G ++ + Sbjct: 87 MGYSVTIMDGKNDQNTQTEQINTFLQQGVDVLVINPVQTTSAQTIVDTVSPSGTPIVFIN 146 Query: 114 RMINDADID------FYISFDNEKVGELQAKALVDIVPQGN--------YFLMGGSPVDN 159 R ++ +D Y+ D + G Q + +++ QG+ Y + G P + Sbjct: 147 REPEESVLDSYKGKCCYVGADARQSGTYQGELILETETQGDINGDGKITYIMCKGDPENI 206 Query: 160 NAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASN 219 +A+ +K L D+ K +++D W A + + NAL+ +KI+ V +N Sbjct: 207 DAQYRTEYSIKAL---TDANKEVECLYEYLDNWDQTTAQQDVANALSQYGDKIEVVFCNN 263 Query: 220 DATAGGAIQALSAQGLS-GK-VAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAE 276 DA A GA+Q++ G + GK V + G DA + ++ + G T TV A AAE Sbjct: 264 DAMALGALQSIQQAGRTVGKDVYLVGVDALVEAVQNVVDGNMTGTVLNDDVGQATKAAE 322 >UniRef50_A5F1B8 Ribose ABC transporter, periplasmic D-ribose-binding protein n=31 Tax=Vibrio RepID=A5F1B8_VIBC3 Length = 294 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 76/292 (26%), Positives = 137/292 (46%), Gaps = 12/292 (4%) Query: 1 MKIKNILLTLCTSLLLTNVA--AHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKV 58 M++K + + +LL T+V+ A A++ + + + L + +D KA+ LG + Sbjct: 1 MRMKKLTTLISAALLSTSVSFVAQAQDT-VAIVLSTLNNPFFVTMKDGAEAKAKELGYNL 59 Query: 59 FVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIND 118 V + + ++S +E++ RGV ++I P + +SN ++ A + I VL DR + Sbjct: 60 IVLDSQNDPSKELSNVEDLTVRGVKAILINPTDSDAVSNAIRIANRSKIPVLTLDRGASR 119 Query: 119 ADIDFYISFDNEKVGELQAKAL-VDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVD 177 ++ +I+ DN GE+ + I + G + A+ G M +K Sbjct: 120 GEVVSHIASDNVVGGEMAGHFIEAKIGSDAKVIQLEGIAGTSAARERGEGFMNAVK---- 175 Query: 178 SGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSG 237 K++++ Q D + L +MEN L AN + + AV A ND A GA++A+ A G S Sbjct: 176 GSKMQLLASQPAD-FDRTKGLNVMENLLAANPD-VQAVFAQNDEMALGALRAIQASGKS- 232 Query: 238 KVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKA 289 V I G D GI + G TV + ++ E A ++ G++ +A Sbjct: 233 -VMIVGFDGTDDGIAAVERGQLAATVAQQPDMIGAIGIETADKMLKGEKVEA 283 >UniRef50_B9DT58 Putative extracellular sugar-binding protein n=1 Tax=Streptococcus uberis 0140J RepID=B9DT58_STRU0 Length = 322 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 75/273 (27%), Positives = 126/273 (46%), Gaps = 34/273 (12%) Query: 55 GAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNG--QVLSNVVKEAKQEGIKVLAY 112 G V+ + ++ N Q+ Q+ I GVDV+VI P + + V+EA+Q+GIKV+ Sbjct: 67 GGIVYTRDSSLNSAKQVEQLHYFIKTGVDVIVINPVKSKDRNIKKAVEEAEQKGIKVIVI 126 Query: 113 DRMIN-DADIDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKV 171 D ++ D + I DN GEL AK L+ L+ K +G+ ++ Sbjct: 127 DSQLSKDVKVTSTIVSDNYHAGELLAKDLMSKKTSARILLL-------EHKDAVSGEQRI 179 Query: 172 LKPYVDS----GKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAI 227 K ++D+ + KV+ G E A+ +E + + + D ++A ND A GA+ Sbjct: 180 -KGFLDTISAQSQFKVMTKLESLGQ-TEIAMPAVEKIIQSQKD-FDVIMALNDQAAIGAV 236 Query: 228 QALSAQGLSGKVAISGQDADLAGIKRIAAGTQ--TMTVYKPITLLANTAAEIAVELGNGQ 285 AL Q + + + G D +K + A T T TV + + N A IA+++ NG+ Sbjct: 237 AALDKQKVDHPILVYGVDGS-PDMKNLLATTSDVTATVSQSPLKMGNQTARIAIKVANGE 295 Query: 286 EPKADTTLNNGLKDVPSRLLTPID-VNKNNIKD 317 VPS++ P+ + K NI+D Sbjct: 296 S-------------VPSKVTVPVKIITKKNIQD 315 >UniRef50_B9JQF4 Sugar-binding transcriptional regulator, LacI family n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JQF4_AGRRK Length = 337 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 77/301 (25%), Positives = 143/301 (47%), Gaps = 15/301 (4%) Query: 6 ILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLER---WQKDRDIFVKKAESLGAKVFVQS 62 +L L T+L T A+AK KI + L E W A+ A + V Sbjct: 14 VLCLLGTAL--TGAPAYAKTFKIAAIVQSLNTEYNVLWADAAKSHPALADGT-ATLTVLD 70 Query: 63 ANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADI- 121 + TQ + + I D ++ IP + + ++ AK GI V + +++ ++ Sbjct: 71 GRQDVLTQSNLFDTAITEKYDAIIFIPVDIDAGNEPIERAKAAGIPVFGSNTVVSKTELY 130 Query: 122 DFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFR-AGQMKVLKPYVDSGK 180 D YI+ ++ + GE+ AKA++D + ++ + +A++ R G VLK +SG Sbjct: 131 DAYINSNDVEAGEMLAKAVIDKAGKDAKVVVLEGMLGQSAQVQRLEGINNVLKQ--NSGV 188 Query: 181 IKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGL-SGKV 239 + +Q W A+ +MEN LT++ +++ V+A ND A GAI+ + GL K+ Sbjct: 189 --TILEQNTANWSRAEAITLMENFLTSHGDQVQGVLAENDEMAVGAIEGIRNHGLDPKKL 246 Query: 240 AISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVE--LGNGQEPKADTTLNNGL 297 ++G D ++ + G QTM++ + + + A ++A+ +G+ +P+A NG Sbjct: 247 PVAGVDGIKDALEAVKRGEQTMSILQDASGQSQGAIDLALSKLVGDTYKPRAKVWDTNGG 306 Query: 298 K 298 K Sbjct: 307 K 307 >UniRef50_A5ZT83 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZT83_9FIRM Length = 324 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 66/221 (29%), Positives = 97/221 (43%), Gaps = 25/221 (11%) Query: 58 VFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIN 117 +F +A N + Q++ IEN + GVD+++ P L+N V A GI V+ DR I+ Sbjct: 69 IFADAAQDNSK-QIADIENFVQMGVDLIITSPNEATPLTNAVSAAYDAGIPVILLDRKID 127 Query: 118 DADIDFYISFDNEKVGELQAKALVD-IVPQGNYFL--------MGGSPVDNNAKLFRAGQ 168 +I DN +G + + + D ++P G GG DN FR G Sbjct: 128 GDKYTQFIGADNVDMGRIAGEYIADTLLPDGGKVCEIKGLEGTSGGIDRDNG---FREGI 184 Query: 169 MKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQ 228 K + KI++V D WL E A+ + E L N++ID +A ND A GA Sbjct: 185 KK-------NDKIEIVAVNNAD-WLREKAITVAEEMLQ-TNDEIDLFLALNDPMAEGAYI 235 Query: 229 ALSAQGLSGKVAISGQDA---DLAGIKRIAAGTQTMTVYKP 266 A G G + G D GI+ + G +MT P Sbjct: 236 AAKNAGREGDILFVGFDGLPTPDGGIRSVMDGRLSMTQVYP 276 >UniRef50_C7QJZ0 Periplasmic binding protein/LacI transcriptional regulator n=5 Tax=Actinomycetales RepID=C7QJZ0_CATAD Length = 371 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 72/226 (31%), Positives = 104/226 (46%), Gaps = 18/226 (7%) Query: 43 DRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEA 102 + D +A+SLG K+ ++AN + Q SQIE+MI +G VL++ P N L + EA Sbjct: 100 ETDSITNQAKSLGVKLIQRNANADVNAQNSQIEDMIAQGAKVLIVAPENSDGLGPALAEA 159 Query: 103 KQEGIKVLAYDRMINDADIDFYISF-DNEKVGELQAKA---LVDIVPQGNYFLMGGSPVD 158 K + I VL DR + +I+F + G+ Q A Q ++ G+P Sbjct: 160 KAKKIPVLTIDRTVTGTACSDFIAFIGSNFYGQAQIAADDLATATGSQAKVAILSGTP-G 218 Query: 159 NNAKLFRAG----QMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDA 214 NN R Q+K P + VV Q + + +M L AN I A Sbjct: 219 NNVTTDRTNGFQDQVKAKYP-----NMTVVASQ-TGKFDQTDGQSVMAQMLQANPG-ITA 271 Query: 215 VVASNDATAGGAIQALSAQG-LSGK-VAISGQDADLAGIKRIAAGT 258 V A ND A GAIQA++A G GK + I D ++ +AAGT Sbjct: 272 VYAENDEMALGAIQAITAAGKKPGKDIKIVSIDGTQQAVQDVAAGT 317 >UniRef50_C2KUT6 Galactoside ABC superfamily ATP binding cassette transporter, binding protein n=3 Tax=Clostridiales RepID=C2KUT6_9FIRM Length = 384 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 66/243 (27%), Positives = 113/243 (46%), Gaps = 29/243 (11%) Query: 66 NEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADID--- 122 ++ TQ +QIEN I VDVL++ P N + + + + GI ++ +R + D D Sbjct: 122 DQATQTNQIENFITDKVDVLIVNPVNSSSAATITDKVQAAGIPLVYINR---EPDQDEEK 178 Query: 123 ---------FYISFDNEKVGELQAKAL-------VDIVPQG--NYFLMGGSPVDNNAKLF 164 Y+ D + G Q + + +D+ G +Y ++ G P + +A+ Sbjct: 179 RWEEKNWDVTYVGCDARQSGTFQGEIIASVGMDKLDMNGNGKVDYIMIKGDPENIDAQYR 238 Query: 165 RAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAG 224 +K L+ D+G D+ V W A ++ NAL N I+ V +ND+ A Sbjct: 239 TEFSVKALQ---DAGMEVNKLDEQVGNWDQALAQSLVANALAKNGKDIEVVFCNNDSMAL 295 Query: 225 GAIQALSAQGLS-GK-VAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELG 282 GA+QA+ A G + GK + + G DA + + AGTQT TV+ ++ A + A+ Sbjct: 296 GALQAIQAAGRTVGKDIYLVGVDALEEACQNVLAGTQTGTVFNDFLTQSHAAGDAAINYL 355 Query: 283 NGQ 285 G+ Sbjct: 356 GGK 358 >UniRef50_C8WRM5 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WRM5_ALIAD Length = 321 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 59/219 (26%), Positives = 112/219 (51%), Gaps = 14/219 (6%) Query: 21 AHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINR 80 A K +K+G A+ L + + ++A+ LG +V + + N + TQ++Q+E++I + Sbjct: 40 ASTKPIKLGFAVSTLNNPFFVAMSNGVQEEAKKLGVQVTILNGNNDPATQLNQVEDLIQQ 99 Query: 81 GVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKAL 140 V+ +++ P + Q LS V++A + I V+ DR + ++ +I+ ++ + G++ A L Sbjct: 100 HVNAIILNPTDSQSLSTAVEQANRAHIPVITLDRSVTKGNVACFIASNSVEAGKMAADEL 159 Query: 141 VDIVPQGNYFLMG-GSPVDNNAKLFRAGQMKVLKPYVDS-GK---IKVVGDQWVDGWLPE 195 + L G G V+ + + + K + + GK I+VV Q + + Sbjct: 160 IKA-------LGGKGQVVELQGVIGTSAEADREKGFDEEIGKAPGIRVVARQTAN-FDRS 211 Query: 196 NALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQG 234 AL +M+N L A+ N I V A ND A GA++A+ G Sbjct: 212 QALNVMQNILQAHPN-IQGVFAQNDEMALGALKAIQEAG 249 >UniRef50_C0C0J1 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C0J1_9CLOT Length = 333 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 61/247 (24%), Positives = 107/247 (43%), Gaps = 17/247 (6%) Query: 6 ILLTLCTSLLLTNVAAHAKE-----------VKIGMAIDDLRLERWQKDRDIFVKKAESL 54 + LT+C SL + K+ VK+ +I ++ W+ F K+A+ Sbjct: 10 LCLTMCLSLAACSSGEKEKKGSDSGDKKEESVKVAFSIPEMFSTFWEACWYGFEKQAKEY 69 Query: 55 GAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDR 114 G + + G+ E Q+SQ+++ + +GVD + + P + + + + G+ V DR Sbjct: 70 GWEATLLDPQGDLELQISQLQSQVTKGVDAIGVAPIENEAIGPALTTVNEAGVPVFCVDR 129 Query: 115 MINDADIDFYISFDNEKVGELQAKALV-DIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLK 173 + ++ + DN K GE A+ LV D + ++ G D G VL+ Sbjct: 130 R-GEGEVVSTLETDNVKAGEAMAEQLVKDYGEDVDVLIIQGVLSDTPTLDRTQGVKNVLE 188 Query: 174 PYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQ 233 Y + I +VG+ + E AL +N L N + +D + DA G + AL Sbjct: 189 KYEN---ITIVGEPSAGEYSNEAALATTKNFLETNPD-LDVIFTCTDALVPGIVAALKEA 244 Query: 234 GLSGKVA 240 G +GKV Sbjct: 245 GKTGKVG 251 >UniRef50_A5KKL8 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KKL8_9FIRM Length = 325 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 82/338 (24%), Positives = 146/338 (43%), Gaps = 38/338 (11%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEV-------------------KIGMAIDDLRLERWQ 41 MK K + + +C S+ + A E K+ M + + + E Sbjct: 2 MKKKMLAVAVCVSMCMMAFAGCTSESGGGSDKKAEQTEGKKEESGKVFMTVSNQQNEFMV 61 Query: 42 KDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKE 101 + F + E+ G +V + A+ + Q+SQIE I+ + +++ P + L+ +KE Sbjct: 62 GMAENFKEVGEAAGYEVQLMDADLDATKQVSQIETAISENAEAILVEPCSVDGLTTGLKE 121 Query: 102 AKQEGIKVLAYDRMINDAD-IDFYISFDNEKVGELQAKALV-DIVPQGNYFLMGGSPVDN 159 A GI V ++ D + I D + GEL+ + ++ D +M G+ + Sbjct: 122 AHDAGIPVFVIHNNVSATDLVTSLIHVDVRQGGELKMEQVIKDCGEDAKIAIMTGTLGQD 181 Query: 160 NAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASN 219 G VL+ Y + ++VV + W +A + EN L A+ +IDA+V +N Sbjct: 182 TTNQICGGYDAVLEKYPN---VEVVF-EGAGNWGATDAAPLAENWL-ASGKEIDAIVCNN 236 Query: 220 DATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAV 279 D A G + L + G S ++ + G DA G+K + +G T+Y A E+ Sbjct: 237 DGMALGVVSVLKSAGKSEQIKVYGLDATNEGLKAVDSGEMAATIYVDSKAEIEKAFEMLE 296 Query: 280 ELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKD 317 +L G++ A+ VPS L+T K N+K+ Sbjct: 297 DLKAGKKVDAEYK-------VPSVLVT-----KENVKE 322 >UniRef50_B0PGH9 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGH9_9FIRM Length = 288 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 72/255 (28%), Positives = 118/255 (46%), Gaps = 14/255 (5%) Query: 30 MAIDDLRLERWQKDRDIFVKKAESLG--AKVFVQSANGNEETQMSQIENMINRG-VDVLV 86 M + L W D +AE LG A +F A + + Q+ + E+ IN G D L Sbjct: 1 MVLKTLSNPFWVDMADGIQAEAEKLGVTADIFAVDAETDIDGQLKKCEDAINSGSYDGLG 60 Query: 87 IIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADID----FYISF---DNEKVGELQAKA 139 + P L + V A Q+G+ V+ D I++ + + + F DN KVG + A+ Sbjct: 61 VAPITATNLISAVVAANQKGMPVVNIDAKIDEDALKEAGGYVVGFATSDNHKVGAIGAQY 120 Query: 140 LVDIVPQGNYF-LMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENAL 198 +++ +P G ++ G D + +L R G + L+ SGK +VV Q D W + AL Sbjct: 121 IMEQLPDGGKVAIIEGRAGDLSGELRRDGCKETLEAD-GSGKYQVVDVQPAD-WDRQKAL 178 Query: 199 KIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGT 258 + N +T + ++A +ND A G +QA++ G +GK+ + G DA + I AG Sbjct: 179 DVATNIITKTPD-LNAFFVANDTMALGVMQAIANTGNTGKILLVGTDASDETKEAIKAGN 237 Query: 259 QTMTVYKPITLLANT 273 P + A Sbjct: 238 MVAVCQDPAAIGATC 252 >UniRef50_Q2YI92 Putative two-component system sensor histidine kinase n=1 Tax=unidentified microorganism RepID=Q2YI92_9ZZZZ Length = 511 Score = 67.8 bits (164), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 63/238 (26%), Positives = 109/238 (45%), Gaps = 10/238 (4%) Query: 62 SANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADI 121 +A ++E Q+ QI++++N G+D+L++ P +S + A +GI V+ ++R Sbjct: 61 AAYDSDERQVQQIDSLMNEGIDLLIVAPNQVNTISPAIDRAYDKGIPVIVFERKTGSQKY 120 Query: 122 DFYISFDNEKVGELQAKALVD-IVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGK 180 +IS DN ++G + + +V + +GN + G + A G M +K D Sbjct: 121 TAFISADNYEMGHVMGEYIVSRLHGKGNVLEIKGLAGSSPAIERHNGFMDAIK---DEPG 177 Query: 181 IKVVGDQWVDGWLPENALKIMENALTANNN-KIDAVVASNDATAGGAIQALSAQGLSGKV 239 IKVVG D W A + + L AN +D V +ND TA GA +AL + L Sbjct: 178 IKVVGSLQGD-WTEATACQKSKEWLAANEGVPVDLVFGANDRTAMGAREALGEKPLY--C 234 Query: 240 AISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGL 297 I G GI+ + + P + ++A+ + GQ + +T L + L Sbjct: 235 GIDGLPGKNGGIQLVRDSLLDASFIYPTH--GDQLMDLAIRILEGQPYEKETMLMSAL 290 >UniRef50_D1ANT2 Periplasmic binding protein/LacI transcriptional regulator n=3 Tax=Bacteria RepID=D1ANT2_SEBTE Length = 330 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 67/266 (25%), Positives = 126/266 (47%), Gaps = 15/266 (5%) Query: 25 EVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNE--ETQMSQIENMINRGV 82 + +I + + L W + ++ K+A + G KV + +A+ E + Q+ IEN++++G Sbjct: 44 QAEIAIVLKTLSNPFWVEMKEGIEKEAAAQGIKVDIIAASSEEDVQEQLRLIENLLSKGY 103 Query: 83 DVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIN-------DADIDFYISFDNEKVGEL 135 + I P + + EA ++GI V+ D ++ + +++ DN KVG Sbjct: 104 KAIGIAPLSPVNTIPAIVEANKKGIYVVNIDEKVDMEQLKKSGGSVLAFVTTDNVKVGAK 163 Query: 136 QAKALVDIVPQGNYF-LMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLP 194 A+ ++ +P+G ++ G + + + R G + K DS K K+V Q D W Sbjct: 164 GAEYIIGKLPEGGEVAIIEGKSGNASGEFRRQGATEAFK--ADS-KFKLVASQPAD-WDR 219 Query: 195 ENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRI 254 AL + N + N + A+ A ND A GA+QA++ G +G++ + G D I Sbjct: 220 SKALDVAANLIQKYPN-LKAIYACNDTMALGAVQAVANAGKTGQILVVGTDGAPEARTSI 278 Query: 255 AAGTQTMTVYKPITLLANTAAEIAVE 280 G TV + ++ T+ +I +E Sbjct: 279 DEGKLNATVAQDPAMIGATSLKILIE 304 >UniRef50_Q3MB45 Periplasmic binding protein/LacI transcriptional regulator n=54 Tax=Bacteria RepID=Q3MB45_ANAVT Length = 343 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 74/265 (27%), Positives = 133/265 (50%), Gaps = 21/265 (7%) Query: 49 KKAESLGA---KVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQE 105 K+A+ +G +V V S+ + Q +QIEN + D+++I + + + V +A+Q Sbjct: 83 KEAKKIGGEDVRVTVVSSGYDLNQQFNQIENFVAANTDLIIINAADSKGIRPAVDQARQA 142 Query: 106 GIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVD-IVPQGNYFLMGGSPVDNNAKLF 164 G V+A D I +ADID ++ +N + GE+ + + D + +GN ++ G PV + + Sbjct: 143 GKVVIAVDTAI-EADIDATVTTNNVQAGEISCQYIADRLKGKGNVVIVNGPPVTSVIQRV 201 Query: 165 RAGQMKVLKPYVDSGKIKVVG-DQWVDGWLPENALKIMENALTANNNKIDAVVASNDATA 223 G +KVL Y D IK++ DQ +G + L++M + L KIDAV A ND + Sbjct: 202 D-GCLKVLAKYPD---IKLLSKDQNAEGSR-DGGLRVMSD-LLVTFPKIDAVFAINDPS- 254 Query: 224 GGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQ--TMTVYKPITLLANTAAEIAVEL 281 G + + Q I G D I+ IA+G T + + TA ++ ++ Sbjct: 255 GVGVDLAANQAKRQDFFIVGVDGAPEAIEAIASGDSLYAATATQNPRGMTQTAIQVGNDI 314 Query: 282 GNGQEPKADTTLNNGLKDVPSRLLT 306 +G++P++ L +P++L+T Sbjct: 315 LHGKKPESPNIL------IPAKLIT 333 >UniRef50_C7REM6 Periplasmic binding protein/LacI transcriptional regulator n=5 Tax=Firmicutes RepID=C7REM6_ANAPD Length = 316 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 66/267 (24%), Positives = 125/267 (46%), Gaps = 18/267 (6%) Query: 25 EVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDV 84 ++KIG+++ L + R+ + A + + A + TQ +Q+E++I +GVD+ Sbjct: 49 DMKIGVSLSTLNNPFFVSIREGVEEAAGKENVETVITDAQNDSSTQNNQVEDLITQGVDL 108 Query: 85 LVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIV 144 +VI P + ++ V++A + I V+ DR + ++ +I+ +N + G+L + +++ V Sbjct: 109 IVINPVDSTAIATSVEKANEANIPVICVDRGSDQGELVSFIASNNVEGGKLAGEYILEKV 168 Query: 145 PQGNYFLM-----GGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALK 199 + + G S + F +GKI ++ Q + E + Sbjct: 169 GENAEVIQLEGIPGASSTRERGEGFEEAT---------NGKINLLASQTANFDRAE-GMT 218 Query: 200 IMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQ 259 +MEN L A+ + + AV ND A GA +A+ A G V I G D + IK + G Sbjct: 219 VMENLLQAHPD-VKAVFCQNDEMALGASEAIKASGKD--VTIVGFDGNEDAIKAVEEGNL 275 Query: 260 TMTVYKPITLLANTAAEIAVELGNGQE 286 + TV + + A E A++ G+E Sbjct: 276 SATVAQKPKEMGKLAIETAIKYLKGEE 302 >UniRef50_A9CF36 ABC transporter, substrate binding protein (Sugar) n=4 Tax=cellular organisms RepID=A9CF36_AGRT5 Length = 309 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 89/327 (27%), Positives = 151/327 (46%), Gaps = 25/327 (7%) Query: 3 IKNILLTLCTSLLLTNVAAHAKEVKIGMAI-DDLRLERWQKDRDIFVKKAESLGAKVFVQ 61 +K ++ S+LL AAHA+ V + MA+ DD L + + K E G + V+ Sbjct: 1 MKKFIIGAAMSVLL-GTAAHAETVGVSMALFDDNFLTVLRNGMLDYSK--ELKGVTLQVE 57 Query: 62 SANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADI 121 A + Q SQI+N I VD +++ P + + + K A I ++ +R + D Sbjct: 58 DAQNDVAKQQSQIQNFIASKVDAIIVNPVDTDATAAMSKLAADAKIPLVYVNRQPVNVDS 117 Query: 122 ----DFYISFDNEKVGELQAKALVDIVP-QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYV 176 +++ D G L+AK + ++ +GN +M G + A++ VLK Sbjct: 118 LPDGQAFVASDETVAGTLEAKEVCRLLGGKGNAVIMMGELSNQAARMRTQSAKDVLKTDE 177 Query: 177 DSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS 236 G I VV +Q + W ++ N L++ + +AV+A+ND A GAIQAL A G Sbjct: 178 CKG-ISVVEEQTAN-WQRTQGSDLVTNWLSSGI-EFNAVIANNDEMAIGAIQALKAAGKD 234 Query: 237 GK-VAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNN 295 K ++G DA + + AG +TV++ A + A++L G + + Sbjct: 235 MKSYVVAGVDATQDALAAMQAGDLDVTVFQDAAGQGKGALDAALKLVKGDKIEKKVY--- 291 Query: 296 GLKDVPSRLLTPIDVNKNNIKDTVIKD 322 +P +L+TP N+KD V K+ Sbjct: 292 ----IPFQLVTP-----ENVKDYVAKN 309 >UniRef50_A5G0N2 Periplasmic binding protein/LacI transcriptional regulator n=4 Tax=Proteobacteria RepID=A5G0N2_ACICJ Length = 345 Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 66/214 (30%), Positives = 95/214 (44%), Gaps = 25/214 (11%) Query: 57 KVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI 116 ++ +A+ N+ Q++ +ENMIN+G L+I P + L +A + I +L DR Sbjct: 89 RLIYTNAHSNQSRQVADVENMINQGAQALIIAPLDSTGLQPAFAQAAAKHIPILTLDRRT 148 Query: 117 NDADIDFYISFDNE----KVGELQAKALVDIVP--------QGNYFLMGGSPVDNNAKLF 164 + Y+SF K GE+ A+ L QG Y G S K F Sbjct: 149 AGSKCSDYLSFLGSNFYFKQGEIDARELAKATGGHAMVAEIQGAY---GNSVEVARTKGF 205 Query: 165 RAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAG 224 AG LK Y +K+V +Q W +A K+M L A+ N ++AV A D A Sbjct: 206 AAG----LKAYPG---MKIVTEQ-TGNWFTTDAQKVMSQILLAHPN-VNAVYAQADTMAF 256 Query: 225 GAIQALSAQG-LSGKVAISGQDADLAGIKRIAAG 257 GAI AL G G+V I D G++ I G Sbjct: 257 GAITALRDAGKKPGQVKIVSIDGTRQGVQDIVDG 290 >UniRef50_A1WGA7 Periplasmic binding protein/LacI transcriptional regulator n=3 Tax=Burkholderiales RepID=A1WGA7_VEREI Length = 361 Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 69/230 (30%), Positives = 106/230 (46%), Gaps = 15/230 (6%) Query: 51 AESLGAKVFVQSANGNEETQMSQIENMINR--GVDVLVIIPYNGQVLSNVVKEAKQEGIK 108 A+S+G + G+ E ++ I ++ + G VL + P + +V+ + G Sbjct: 70 AKSVGLPYVPLTTEGSSEKGIADIRALLQKTGGNLVLNVDPNDSADARVIVETCAKAGAH 129 Query: 109 VLAYDRMIND-ADIDF------YISFDNEKVGELQAKALVDIVP-QGNYFLMGGSPVDNN 160 V ND DF ++SFD G A L + QG +GG + Sbjct: 130 VTTIWNKPNDFHPWDFNPHYVAHLSFDGLAYGAATATELFKAMGGQGGVVALGGIFSNVP 189 Query: 161 AKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASND 220 A +AG M LK + D I+++ Q D W + A IM+ LT N K+ V A+ND Sbjct: 190 AIERKAGLMAALKKFPD---IQLLDFQVAD-WDSQKAFPIMQAWLTRFNTKVKGVWAAND 245 Query: 221 ATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTV-YKPITL 269 A GAI+AL A+GL+G++ +SG D G+ + AG TV + P L Sbjct: 246 DMALGAIEALRAEGLAGQLLVSGMDGTQPGLAALKAGELVATVDWDPYWL 295 >UniRef50_C7IGF5 ABC-type sugar transport system periplasmic component-like protein n=2 Tax=Clostridium RepID=C7IGF5_9CLOT Length = 331 Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 67/264 (25%), Positives = 119/264 (45%), Gaps = 17/264 (6%) Query: 57 KVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI 116 K+ V N++T+ S IEN I D++++ P NG+ V++ + GI + + I Sbjct: 74 KLDVFDGQANDDTENSMIENAITNKYDLVIVQPNNGEAQRPYVEKVVKAGIHAITTNARI 133 Query: 117 NDADIDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDN-NAKLFRAGQMKVLKPY 175 + + + + + + A+A ++ +PQ ++ P N +A R K + Sbjct: 134 SGIEGASSVDANPYEQAGVNARAAIEQIPQNAKVVVLDGPSGNFHADERRKSWQKEF--F 191 Query: 176 VDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGL 235 +K+VG+Q + W + A+K ME+ + +N+ KIDAV++ ND A GAI+ + Sbjct: 192 EKRPDVKIVGEQ-IANWNKDEAMKYMEDWIQSND-KIDAVISMNDNMAAGAIEVVKDNPK 249 Query: 236 SGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNN 295 + G D + I G T T + LA E +L G E + DT + N Sbjct: 250 FKNMLAYGVDGTAEALLLIQEGKMTSTCMQSAYDLATKLLESGNKLLTGGEKQIDTDIGN 309 Query: 296 GLKDVPSRLLTPIDVNKNNIKDTV 319 L VNK+N++ + Sbjct: 310 PL------------VNKDNVQQYI 321 >UniRef50_Q0SSJ2 Ribose ABC transporter, ribose-binding protein n=10 Tax=Clostridium RepID=Q0SSJ2_CLOPS Length = 301 Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 75/287 (26%), Positives = 128/287 (44%), Gaps = 14/287 (4%) Query: 6 ILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANG 65 +L+ L TS + + KIGM + L + +D K+AE LG + V + Sbjct: 13 MLMMLMTSFI---GCGRDNKPKIGMVLSTLNNPFFVNMKDGAEKEAEKLGYDLVVLDSQN 69 Query: 66 NEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYI 125 + + + +E++I GV L+I P + + V+ A + I V+ DR N I +I Sbjct: 70 DPAKERANVEDLIQLGVIALLINPTDSDAVVKTVEVANKSNIPVITLDRQANGGKITSHI 129 Query: 126 SFDNEKVGELQAKALVDIVPQG----NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKI 181 + DN K GE+ A+ ++D N + G P + + G ++ + K Sbjct: 130 ASDNIKGGEMAAEYVLDKFKDEKGPINVVEIQGIPGASATRDRGEGFHNIMDK---NDKF 186 Query: 182 KVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAI 241 + Q D + + L++MEN + AN N I V A ND A GA++A+ A G++ V Sbjct: 187 NFISIQAAD-FDRQKGLQVMENIIQANPN-IQVVFAHNDEMALGAVKAIKASGINALVI- 243 Query: 242 SGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPK 288 G D + I A T + + L+ E+A ++ G+ K Sbjct: 244 -GFDGNDDAKDSIDANEMTAIIAQQPDLIGALGVELANKIYKGESIK 289 >UniRef50_B5GKD2 D-ribose ABC transporter permease protein n=1 Tax=Streptomyces sp. SPB74 RepID=B5GKD2_9ACTO Length = 432 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 60/243 (24%), Positives = 111/243 (45%), Gaps = 6/243 (2%) Query: 55 GAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDR 114 G +V A G+ S +E+++++ VD ++I + V+ K G + DR Sbjct: 176 GVEVVSTDAGGDAAKLASNVEDLLSKNVDAVIISGGPLESAPAVLNALKSAGKPAILVDR 235 Query: 115 MINDADIDFYISFDNEKVGELQAKALV-DIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLK 173 +I DNE +G + L + L+ G P DN+ L R +K Sbjct: 236 KFRSGTYASWIGPDNEAIGRQDGEFLAAKLGKDATVALIKGGPADNSIGLAR---TTGVK 292 Query: 174 PYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQ 233 +D+ I++V W + L +ME+ L A++ +DAV NDA GA +A+ Sbjct: 293 KALDAAGIRMVEGPDYGNWASDGGLTVMES-LLASHKDLDAVFCENDAMCLGAQRAVKDA 351 Query: 234 GLSGKVAISGQDADLAGIKRIAAGTQTM-TVYKPITLLANTAAEIAVELGNGQEPKADTT 292 G ++ ++G D ++ IAAG + T + + + AV++ +G++P+ DT Sbjct: 352 GREKEIVLAGVDGQAEALQAIAAGGNYLVTGLNDADQIGSLGLDRAVDILDGKKPEKDTV 411 Query: 293 LNN 295 +++ Sbjct: 412 VDS 414 >UniRef50_UPI00019735E2 sugar-binding transcriptional regulator, LacI family protein n=1 Tax=Clostridium sp. M62/1 RepID=UPI00019735E2 Length = 349 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 59/218 (27%), Positives = 103/218 (47%), Gaps = 7/218 (3%) Query: 45 DIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQ 104 ++FV A+ G +V +A+ +E TQ+SQIE I G V ++ G+ ++ KEAK+ Sbjct: 82 EVFVDTAKDYGFEVDHLTADSDEATQLSQIEQGIASGQYVGIVCDCTGEGVTQGFKEAKE 141 Query: 105 EGIKVLAYDRMIND-ADIDFYISFDNEKVGELQAKALVDIVPQG-NYFLMGGSPVDNNAK 162 G+ V+ + D +++D ++ + G + V+ + + N ++ GS Sbjct: 142 AGMFVITLHEGVKDNSNVDCVVACSLAETGYEAIRLEVEELGEAFNLAIVNGSEGHGATV 201 Query: 163 LFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDAT 222 R G K L+ + + I VV D W E A+ + E ++ +ID +V ND Sbjct: 202 AIREGYDKALEEFPE---INVVFD-GAGNWNAEEAMALTETWFSS-GEEIDGIVCMNDGM 256 Query: 223 AGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQT 260 A G Q + G+ G + I D + + IAAG Q+ Sbjct: 257 ATGVRQVMRDNGVLGTIPIYSNDCEENTLDAIAAGEQS 294 >UniRef50_C4FY38 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FY38_9FIRM Length = 339 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 79/311 (25%), Positives = 136/311 (43%), Gaps = 37/311 (11%) Query: 6 ILLTLCTSL---LLTNVAAHAKEVKIGMAI---DDLRLERWQKDRDIFVKKAESLGAKVF 59 I C +L L V A K +KIG+A DD + + + K E ++ Sbjct: 10 IFCLFCLALVPSLSPKVQAEDKNIKIGVAFYKYDDAYMSSVRVALEKIAK--EHSNVELI 67 Query: 60 VQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDR----- 114 V + ++ Q QI+ MI +GVDVL+I + VV++AK I ++ ++R Sbjct: 68 VNDSQNDQAKQNDQIDVMIQKGVDVLLINVVDTGAAEAVVQKAKDANIPLVLFNREPATD 127 Query: 115 MINDADIDFYISFDNEKVGELQAKALVDIVPQ-------GN----YFLMGGSPVDNNAKL 163 ++ D ++ ++ G +Q K + ++ GN Y ++ G P + A Sbjct: 128 VVKAYDKARFVGTTAKEAGIIQGKMIAELWKSDKKYDRNGNGKLDYVMLIGDPENPEA-- 185 Query: 164 FRAGQMKVLKPYVDSGKIKV--VGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDA 221 + K + KI+V +GDQ V W P+ A + L + + ID ++++ND+ Sbjct: 186 --IARTKYAVDTLTEAKIEVNKLGDQ-VANWDPDKAKTATDAWLAKDADNIDVIISNNDS 242 Query: 222 TAGGAIQALSAQGLSG------KVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAA 275 A GAI AL G + K+ + G DA + IA G T TV + +A Sbjct: 243 MASGAIAALQGAGFNTDAKADKKIPVFGVDATEEAVDLIARGIMTGTVKQDAEGMAKAVF 302 Query: 276 EIAVELGNGQE 286 ++ G G++ Sbjct: 303 ALSYNAGQGKD 313 >UniRef50_A6UHJ3 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Sinorhizobium RepID=A6UHJ3_SINMW Length = 322 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 77/292 (26%), Positives = 125/292 (42%), Gaps = 29/292 (9%) Query: 18 NVAAHAKEVKIGMAIDDLRLERW--QKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIE 75 + A K+ +IG + +E W Q ++DI + A+ ++ + E Q++ +E Sbjct: 27 DAVAQDKKFRIGFS-QATTIEPWRAQFNKDIIAEAAKHPDVELIITDGEDRTEKQVADVE 85 Query: 76 NMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGEL 135 N+I + VD L++ P L+ VV++A I V DR + ++ DN+ +G Sbjct: 86 NLIRQEVDALLVSPKESAGLTGVVQQAIDAKIPVFVLDRNVETDQYTQFVGGDNKLIGRA 145 Query: 136 QAKALVDIV-----PQGN----YFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGD 186 + V+++ QGN + MG P + F + +P + + K GD Sbjct: 146 AGEYAVELLGGKGKAQGNIVEIWGGMGTQPAHDRHDGFH--EFTDKEPGIKNLLDKQSGD 203 Query: 187 QWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDA 246 W + A IM AL NN KID V ND A GA A G ++ G DA Sbjct: 204 -----WKQDQAYNIMATALR-NNEKIDLVYGHNDPMAYGAYLAAKDAGREKEIKFIGIDA 257 Query: 247 -DLAGIKRIAAGTQTMTVYKPITLLANTAAE---IAVELGNGQEPKADTTLN 294 G+ ++ G T T L A AE AV+ G++ + TL+ Sbjct: 258 LPNEGVTWVSNGELTATF-----LYATPGAEGLRQAVKFLKGEKVEKTVTLD 304 >UniRef50_C0CSY8 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CSY8_9CLOT Length = 376 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 82/295 (27%), Positives = 136/295 (46%), Gaps = 43/295 (14%) Query: 37 LERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLS 96 +E + K+ ++K + +F +S N N TQ+ QIEN I +GVD ++I P + L+ Sbjct: 86 MEGYLKEAAEELQKTGEVSEVIFAES-NQNNSTQVQQIENFILQGVDAIIIDPGSATALN 144 Query: 97 NVVKEAKQEGIKVLAYDRMIND------ADIDFYISFDN-EKVGELQAKALVDIVPQGNY 149 ++EA GI + +IND A++ + I+FD ++G L I +GN Sbjct: 145 GAIQEASDAGIPCI----IINDGPVSSEAELCYQINFDTIAQMGYLTEYVCEAIGGKGNI 200 Query: 150 FLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANN 209 + G+ + G +KVL+ Y D IKVV + + D W A + + L Sbjct: 201 IELRGTAGSEFDNIAHEGVLKVLEKYPD---IKVVAEIYTD-WTGSKAQSELASVL-PTL 255 Query: 210 NKIDAVVA-SNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPIT 268 +K+D VV D+ A A+QA + GL + I G D +K A + Y ++ Sbjct: 256 DKVDGVVTQGGDSYA--AVQAFQSAGLD--LPIIGGDNRGYFLKWWA--NEAPEGYDTVS 309 Query: 269 LLAN-----TAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPID-VNKNNIKD 317 + +N T +AV++ +G KDVP ++ P V K+ +KD Sbjct: 310 VSSNPWDGATGLYVAVDILDG-------------KDVPKEMIHPFGIVTKDEVKD 351 >UniRef50_D2S5J9 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S5J9_9ACTO Length = 335 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 73/283 (25%), Positives = 127/283 (44%), Gaps = 42/283 (14%) Query: 26 VKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVL 85 +KIG ++ DL+ WQ AE G +V + +++ Q+S ++IN+G+ L Sbjct: 40 LKIGYSVYDLQNPYWQSYAAGVRAGAEEAGIEVVIADQKSSQQEQVSGSLDLINQGISAL 99 Query: 86 VIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVP 145 +I P L + + A E I V+ D + + D D YI +N + G L A+ +V+ Sbjct: 100 IITPVQPSALPSTIDAAHGEKIPVVVAD-IGTEGDYDGYILSNNYEGGRLAAEHVVE--- 155 Query: 146 QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWL----PENALKI- 200 +GG+P + Q+ V++ + S VVG++ V G++ E +I Sbjct: 156 -----KLGGTPGPH--------QVGVIELHAGS----VVGEERVSGFVDRLGEEENFEIV 198 Query: 201 --------MENALTA------NNNKIDAVVASNDATAGGAIQALSAQGLS--GKVAISGQ 244 ++ TA N ++D + A+ND +A GA +A+ G+S + G Sbjct: 199 SSLDGNDTVDGGFTAAQDMLSANPELDVIYAANDDSAVGASRAMETAGVSVANGFTLIGF 258 Query: 245 DADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEP 287 D + I G + TV + A E A+ L NG++P Sbjct: 259 DGSDPALDLIEQGVMSGTVAQDPFGQGQKAVETALALLNGEDP 301 >UniRef50_A0LA89 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LA89_MAGSM Length = 374 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 70/268 (26%), Positives = 122/268 (45%), Gaps = 20/268 (7%) Query: 2 KIKNILLTLCTSLLLTNVA----AHAKEV--KIGMAIDDLRLERWQKDRDIFVKKAESLG 55 +I + TL +++T A AHA++ ++G D L + W+ + + + Sbjct: 64 RISRPMRTLPAIVMMTLYALAGLAHAQQPPWRVGFCQDTLDIP-WRAAQAMTFSQTLQTD 122 Query: 56 AK--VFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYD 113 + V + A GN Q +E+M+ RGV VLV P +G VL+ V+ ++G+ V+ Sbjct: 123 KRFQVILSDAKGNTTQQAIDLEHMVERGVHVLVTSPRDGAVLTPVISNIYRQGVPVVLLS 182 Query: 114 RMINDADIDFYISFDNEKVGELQAKALVDIVPQGNYFLM---GGSPVDNNAKLFRAGQMK 170 R D + +I+ D+ ++G A+ L + + L+ GS + Q Sbjct: 183 RRTLDENFTTFIAPDDAEIGRQAARYLSKRLNEKGKILVIQGLGSASTTQQRTVGFIQEL 242 Query: 171 VLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQAL 230 L P+ +++V + + + E A+ IME+ L A DA+ +DA A GAI AL Sbjct: 243 SLHPH-----MQIVAQPFAN-YKKEMAILIMESIL-AQKLPFDAIYVHSDAMALGAILAL 295 Query: 231 SAQGL-SGKVAISGQDADLAGIKRIAAG 257 G+ K+ I D AG + + G Sbjct: 296 KRAGIDPTKLPIVSIDYTRAGRESLRKG 323 >UniRef50_C3QNV9 Sensor protein n=5 Tax=Bacteroides RepID=C3QNV9_9BACE Length = 960 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 68/247 (27%), Positives = 107/247 (43%), Gaps = 6/247 (2%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFV 60 MK + L L L A +IG+A R + + +I + G V + Sbjct: 5 MKYMKWITVLFCLLGLAACRQDAPRFRIGVAQCSDDSWRHKMNDEILREAMFYDGVSVEI 64 Query: 61 QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD 120 +SA + Q + I++GVD+L+I ++ +V+EA Q+GI V+ DR I Sbjct: 65 RSAADDNRKQAEDVHYFIDKGVDLLIISANEAAPMTPIVEEAYQKGIPVILVDRKILSDK 124 Query: 121 IDFYISFDNEKVGELQAKALVDIVP-QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSG 179 YI DN ++G + + +GN + G A G M + Y D Sbjct: 125 YTAYIGADNYEIGRAVGNYIASSLKGKGNVVELTGLGGSTPAMERHQGFMAAISNYPD-- 182 Query: 180 KIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKV 239 IK++ D+ W E A ++ +++ + KIDAV A ND A GA QA G ++ Sbjct: 183 -IKLI-DKADAAWEREPA-EVEMDSMLRRHPKIDAVYAHNDRIAPGAYQAAKKAGREKEM 239 Query: 240 AISGQDA 246 G DA Sbjct: 240 IFVGIDA 246 >UniRef50_B0PES6 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PES6_9FIRM Length = 372 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 60/227 (26%), Positives = 104/227 (45%), Gaps = 17/227 (7%) Query: 28 IGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVI 87 IG + E WQ + F + LG NG+ Q+S +E MI+ G++ LV+ Sbjct: 59 IGFSFPTSNNEFWQNAVNYFKMASSDLGFTPLSDDCNGDTAEQLSDVETMISSGINALVL 118 Query: 88 IPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADI---DFYISF---DNEKVGELQAKALV 141 P + V+ ++ ++ I V+ DR+ D DI + YI+F ++E+ G +A AL+ Sbjct: 119 APQDSSVVPGILNACNEKSIPVVIIDRL-PDEDIVAGEDYIAFIGPNDEEAGYQEAIALI 177 Query: 142 DIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLK--PYVDSGKIKVVGDQWVDGWLPENALK 199 + + N +GG + A G M+ L+ P V + G+ W DG + + + Sbjct: 178 NAGVK-NLVAVGGIQGTSVAMGRNDGLMRALEEHPEVTLLQSDYAGENWDDG---DKSFR 233 Query: 200 IMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDA 246 M +A + ++D V ND+ A + L+ G V + G D Sbjct: 234 NMYSA----HPELDGVWCYNDSLALSTVNVLTESGAIDSVKVGGMDC 276 >UniRef50_B2IJW8 Periplasmic binding protein/LacI transcriptional regulator n=14 Tax=Alphaproteobacteria RepID=B2IJW8_BEII9 Length = 314 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 84/321 (26%), Positives = 146/321 (45%), Gaps = 27/321 (8%) Query: 3 IKNILLTLCTSLLLTNVAAHAKEVKIGM-AIDDLRLERWQKDRDIFVKKAESL-GAKVFV 60 +K ILL ++ + +A A+ + + M A DD L R+ + +SL V + Sbjct: 1 MKRILLAAVMAINFS-CSAGAESIGVSMSAFDDNFLTVL---RNALIAHGQSLPNVNVQM 56 Query: 61 QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD 120 + A + Q SQ++N I GV +++ P + + K A + ++ +R + D Sbjct: 57 EDAQNDVARQQSQVQNFIASGVSAIIVNPVDTDATEAISKLAADAKVPLVYVNRQPANVD 116 Query: 121 ----IDFYISFDNEKVGELQAKALVDIVP------QGNYFLMGGSPVDNNAKLFRAGQMK 170 +I+ D G LQA+ + ++ N +M G + N A R + Sbjct: 117 RLPETQAFIASDEAVSGTLQAQEVCRLLKARGKGKSANVVVMMGQ-LSNQASRQRTKDVH 175 Query: 171 VLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQAL 230 + + +KVV +Q + W A+ +M N L+A + DAV+A+ D A GAIQA+ Sbjct: 176 DVIATPECAFMKVVEEQTAN-WQRTEAMNLMSNWLSAGI-QFDAVIANADEMAIGAIQAM 233 Query: 231 SAQGLSGK-VAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKA 289 + GL K ++G D GI+ + G +TV++ A + A+ L G+ K Sbjct: 234 RSAGLPVKDYIVAGIDGGRDGIELMRQGYLDVTVFQDAAGQGAGALDTALMLARGK--KT 291 Query: 290 DTTLNNGLKDVPSRLLTPIDV 310 D T+ VP +L+TP +V Sbjct: 292 DRTIW-----VPFQLITPTNV 307 >UniRef50_C0C2X7 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2X7_9CLOT Length = 324 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 71/250 (28%), Positives = 109/250 (43%), Gaps = 32/250 (12%) Query: 24 KEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVD 83 +E+ IG+ + L W + + G K V + +TQ++Q+EN I +GVD Sbjct: 38 EEISIGVTVMTLANTIWAETCTAIEDNCKENGWKCTVVDCSSTAQTQITQVENFIQKGVD 97 Query: 84 VLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVG---------- 133 +VI P + L V+KEA GIKV+++D I+ D + DN VG Sbjct: 98 AIVINPTDQAALETVMKEAMDAGIKVISWD--IDSDAADCCLLVDNYNVGYEIGKQAADW 155 Query: 134 ---ELQAKALVDIV--PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQW 188 L KA V I+ P+ ++ + N+A + KV+ G Sbjct: 156 IEDNLDGKAEVCILDYPEAGAEVIKRADGINDAITELSPNSKVVAQVSHQGS-------- 207 Query: 189 VDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVA-ISGQDAD 247 DG ++ MEN L +N + V + D A GA +AL A G+ G+ A I D Sbjct: 208 TDG-----GMQAMENVLQSNPD-CRVVCSVGDGGAMGANEALKAAGIKGEEAGIFSADGT 261 Query: 248 LAGIKRIAAG 257 + +IAAG Sbjct: 262 TEFLSKIAAG 271 >UniRef50_D1AQM7 Periplasmic binding protein/LacI transcriptional regulator n=9 Tax=Bacteria RepID=D1AQM7_SEBTE Length = 326 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 67/256 (26%), Positives = 116/256 (45%), Gaps = 27/256 (10%) Query: 70 QMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD------IDF 123 Q+SQ+E++I++ VD++ I + V+ A + I +LA+ I D + + Sbjct: 83 QLSQVEDLISKKVDLIAIAAVDSNAAKTAVRMANEANIPILAFTNAIGDKENGEYEGLIT 142 Query: 124 YISFDNEKVGELQAKALVDIVPQ--GNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGK- 180 Y+ + + G+L + ++ + G L+ G P + R G M+ L D+ K Sbjct: 143 YVGQNEVETGKLTGELAKSLLGEKGGKVVLIEGRPGTSPQINRRKGVMEAL----DTNKN 198 Query: 181 IKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVA 240 +VV Q W E ALKI+E+ L N ID ++A +D +A GA AL L K+ Sbjct: 199 FEVVYTQ-TSNWEKEQALKIVED-LIQKNQTIDVIIAQDDNSAIGAGMALKEANLKDKIL 256 Query: 241 ISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDV 300 + G G+ + +G T Y TA AV+ NG++ + Sbjct: 257 VIGLGGSTEGLNAVKSGLIDGTTYMSAVEEGYTAITAAVKYLNGEKVE------------ 304 Query: 301 PSRLLTPIDVNKNNIK 316 P + ++VNK+N++ Sbjct: 305 PVTQMKQVEVNKSNVE 320 >UniRef50_B0NEL2 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NEL2_EUBSP Length = 321 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 58/242 (23%), Positives = 115/242 (47%), Gaps = 11/242 (4%) Query: 55 GAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDR 114 G + + A G+ Q++ E +I + VD L++IP + + + VV A + I ++ + Sbjct: 66 GVDLIMADAEGDVNKQINDCETLIAQQVDALIVIPQDVEGSAPVVSMANEADIPIIICNG 125 Query: 115 MINDADIDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKP 174 I D + ++ +++ GE+ D V G+ + P + ++GQ+ Sbjct: 126 DIADKNYTAFVGCTDQESGEILGTWFNDNVEHGSQICIIEGP------MGQSGQVGRYAG 179 Query: 175 YVDSGKI---KVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALS 231 + + G + +V+ Q + W + A+ + E+ LT +K+ A+V ND A GA+ A Sbjct: 180 FEEVGMLDNFEVLSCQTAN-WKRDEAMALAEDWLTTYGDKLKAIVCENDDMAMGALSACK 238 Query: 232 AQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADT 291 A G + V I G D I+ + G ++V + A E+A+++ NG++ + DT Sbjct: 239 AAGRT-DVVIGGVDGLEDAIQAVKDGELGVSVLQDSAGQGEGAVEVALQIINGEDYQKDT 297 Query: 292 TL 293 + Sbjct: 298 RI 299 >UniRef50_A5ZT86 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZT86_9FIRM Length = 318 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 80/306 (26%), Positives = 138/306 (45%), Gaps = 39/306 (12%) Query: 2 KIKNILLTLCTSLLLTNVAAHAK---------EVKIGMAIDDLRLERWQKDR-DIFVKK- 50 KI ++L ++LLT ++K + IG+++ ++ +E W + D+F +K Sbjct: 6 KIWTVILVAAATVLLTISTQYSKKEEISTDSYQYLIGVSLPNV-IEPWLNNFVDVFTEKV 64 Query: 51 AESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVL 110 ++ V + A GN E Q+ IE ++ G+D+L++ P LS+V+ EA Q+ I V+ Sbjct: 65 SQDKKINVIFRDAAGNPEKQIQDIETLMEYGIDILIVSPDGSDSLSSVLSEAFQK-IPVI 123 Query: 111 AYDRMINDADIDFYISFDNEKVGELQAKALVD---------IVPQGNYFLMGGSPVDNNA 161 D I D++K+G L + +++ +V QG + SPV + Sbjct: 124 LTGVGAGTEDYTCLIKSDDQKIGRLAGEYILNNLYEKNKKIVVFQG----VEESPV--SK 177 Query: 162 KLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDA 221 + + Q V + GD WL + A M++ L ++++ D V A ND Sbjct: 178 QRLKGFQDSVQGTIPEEDITYYCGD-----WLRDRAELRMKDYLISHDSA-DIVFAFNDD 231 Query: 222 TAGGAIQALSAQGLSGKVAISGQD---ADLAGIKRIAAGTQTMTVYKPITLLANTAAEIA 278 A GA QA + GKV + G D + AG+ + G T+ P + EIA Sbjct: 232 MAYGAYQACQQYRIEGKVHLIGVDGFEGESAGLSLVDKGVLDATIQTPD--FGGLSYEIA 289 Query: 279 VELGNG 284 +L G Sbjct: 290 RKLLEG 295 >UniRef50_A4TI53 Sugar ABC transporter periplasmic binding protein n=23 Tax=Yersinia RepID=A4TI53_YERPP Length = 319 Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 81/331 (24%), Positives = 143/331 (43%), Gaps = 23/331 (6%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFV 60 MK + I L L + +V+A A+ +KIG A L + + A+ G + Sbjct: 1 MKKRLIGLLLAGVTISMSVSA-AEPLKIGFANRTLNGAFFNGLTEYMKIHAKEKGYTLIT 59 Query: 61 QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIN-DA 119 A G+ Q++ +E+M+++G++ L++ P + Q + + AK+ G+ + D I +A Sbjct: 60 TDARGDLNKQIADVEDMLSQGINYLILNPQDPQAGLRITEIAKRAGVPTVILDSDIALEA 119 Query: 120 DIDFYISFDNEK---------VGELQAKALVDIVPQGNYF-LMGGSPVDNNAKLFRAGQM 169 + + +N K VG+ K + I GN L+G + DN F G Sbjct: 120 PVITRVQANNAKNNNLIGEYAVGQFGDKPMNCIFLSGNQGNLVGQARRDN----FLLGVA 175 Query: 170 KVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQA 229 + + + + W + W + LK ME+ + A +KI+ V + D A GAI+A Sbjct: 176 EAQLRKYNRTNVNFLSQGWGN-WDQQGGLKAMEDIIVAQGDKINCVYSEMDDMALGAIRA 234 Query: 230 LSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKA 289 L A V + D G++ + G T LL +T E+ + GQ Sbjct: 235 LKAANKLDNVKVYAHDGYKKGLEAVKKGELQATASNNPDLLTSTVLEVIGQYQAGQTSFP 294 Query: 290 DTTLNNGLKDVPSRLLTPIDVNKNNIKDTVI 320 D +PS L+T +V+K +D++ Sbjct: 295 DYVY------IPSILITKDNVDKYYKEDSIF 319 >UniRef50_B2J7A7 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2J7A7_NOSP7 Length = 318 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 63/212 (29%), Positives = 97/212 (45%), Gaps = 31/212 (14%) Query: 60 VQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDA 119 + A G Q + IE++I R VDV+ + P + L+ ++ A+ I + DR Sbjct: 66 ITDAQGQTSKQFADIEDLIARQVDVIFLAPREYEGLTPALEAARAAKIPIFLIDREAAGR 125 Query: 120 DIDFYISF-------DNEKVGELQAKA------LVDIVPQGNYFLMGGSPVDNNAKLFRA 166 + ++SF +VGE AKA +V++ G S + AK FR Sbjct: 126 PGEHFVSFLGSDFIAQGRRVGEWLAKATDGKASIVELTGTA-----GSSVAIDRAKGFR- 179 Query: 167 GQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGA 226 + Y + +K++ Q D + A+++MEN + A + I AV A ND A GA Sbjct: 180 ---NAIATYPN---MKIIATQTAD-FSRAAAVRVMENIIQAKGSDITAVYAHNDEMALGA 232 Query: 227 IQALSAQGL-SGK----VAISGQDADLAGIKR 253 IQAL + G+ GK +I GQ A L I R Sbjct: 233 IQALKSAGMKPGKDVMVGSIDGQKAALEAIIR 264 >UniRef50_B9KPX1 Periplasmic binding protein/LacI transcriptional regulator n=14 Tax=Alphaproteobacteria RepID=B9KPX1_RHOSK Length = 321 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 69/269 (25%), Positives = 131/269 (48%), Gaps = 27/269 (10%) Query: 59 FVQSANGNEETQMSQIENMI-NRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIN 117 FV + GN ++ IE+M+ R + LV++P+ + L++ V+ K+ GI V DR ++ Sbjct: 69 FVLATAGNAGKMVNDIEDMVATRNISALVVLPFESEPLTSPVQAVKEAGIWVTVVDRGLS 128 Query: 118 DADI-DFYISFDNEKVGELQAKALVDIVPQG-NYFLMGGSP--VDNNAKLFRAGQMKVLK 173 I D Y++ DN G + + + G ++ G P +DN +++ Sbjct: 129 VEGIEDLYVAGDNPGFGRVAGEYFAQHLESGKKIVVLRGIPTTLDNE-------RVEAFT 181 Query: 174 PYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQ 233 +D I+V+ D W ++A +M++ L+ +IDAV A++D A GA++A++ Sbjct: 182 AAIDGSGIEVL-DMQHGNWNRDDAFNVMQDFLS-KYPQIDAVWAADDDMAIGAMEAIAQA 239 Query: 234 GLSGKVAISGQDADLAGIKRIAAGTQTM---TVYKPITLLANTAAEI-AVELGNGQEPKA 289 G + ++ + G I+RIA G + Y P + +TA E+ A++L Sbjct: 240 GRTEEMWVMGGAGMKEIIRRIADGDPQLPANVTYPPAQI--STAIELTALKL-------V 290 Query: 290 DTTLNNGLKDVPSRLLTPIDVNKNNIKDT 318 +T +G + S+L+TP + + D+ Sbjct: 291 SSTPVSGRFIIGSQLVTPENAEQFYFPDS 319 >UniRef50_C5V3A4 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V3A4_9PROT Length = 303 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 86/321 (26%), Positives = 145/321 (45%), Gaps = 37/321 (11%) Query: 3 IKNILLTLCTSLLLTNVAAHAKEVKIG---MAIDDLRLERWQKDRDIFVKKAESLGAKVF 59 ++ +LL C L VAA K + MA +D R + + RD V + L F Sbjct: 7 LRVLLLAFC----LPAVAAENKVIAFAQDTMA-NDFRRAQVYEVRD-EVARYPQLS---F 57 Query: 60 VQS-ANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIND 118 V S A G + QIE I + VD+LV+ + Q + VV +A Q GI V+ DR IN Sbjct: 58 VYSDAQGQTSLLIRQIEQFIEQKVDLLVLGTNDEQAVVPVVTKAYQAGIPVIVLDRGING 117 Query: 119 ADIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVD 177 +I+ DN ++GE+ A+ + + +G L G + +L G + + + Sbjct: 118 KQFTSFINSDNIRIGEIGAEYIASRLNGKGLVLLFEGLQKADVTQLRSKGFLTEIGKHSG 177 Query: 178 SGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSG 237 I+ G+ +L ++A+ ME L ++ ++DA+ + +D+ G LS + Sbjct: 178 IRVIRRTGN-----YLRKDAVVEMEK-LVSDGIRVDAIFSESDSMLSGVRMVLSKSNIDP 231 Query: 238 K-VAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNG 296 + V + G D + I GTQ+ +V P L A EIA+++ G+ Sbjct: 232 RSVVMVGCDYTSEARQAIRDGTQSGSVLFP--LGGKKAVEIALKIFAGE----------- 278 Query: 297 LKDVPSRLLTPID-VNKNNIK 316 VP + P+ V K+N++ Sbjct: 279 --SVPKHIYNPVKLVTKDNVE 297 >UniRef50_A8RKK5 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RKK5_9CLOT Length = 350 Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 64/263 (24%), Positives = 120/263 (45%), Gaps = 41/263 (15%) Query: 69 TQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADI------- 121 TQ+SQ+EN I G ++ + + + +V+ K+ G+ ++A++R+ + D Sbjct: 112 TQISQVENQILNGTQAIICLAVDAKQSEPIVRACKEAGVPLIAFNRIFENCDSFVGADGA 171 Query: 122 ---DFYISFDNEKVGELQAKALVD-IVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVD 177 F EK G A+V+ I+ Q N F+ + V+ +++ M+V+ Sbjct: 172 VAGSLLARFTGEKTGGKGNVAIVNGIMGQENQFIRRDAIVETLGEMYP--DMQVV----- 224 Query: 178 SGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSG 237 I+ GD W + AL+++E L + + IDA++ ND A G A+ G S Sbjct: 225 ---IEGAGD-----WKRDKALQLVETWLQSGTD-IDAILCLNDDMAMGTQLAVEQAGKSD 275 Query: 238 KVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGL 297 + + G + D GI + G TV++ A A E A++ +G++P+ Sbjct: 276 DIIVCGVNGDPDGINAVRDGKIAATVFQNPDRQAEEALEAALQYIHGEKPE--------- 326 Query: 298 KDVPSRLLTPID-VNKNNIKDTV 319 S+++ P + V +N+ D V Sbjct: 327 ----SKIMIPFELVTADNVDDYV 345 >UniRef50_B8H8H8 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8H8H8_ARTCA Length = 322 Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 72/288 (25%), Positives = 128/288 (44%), Gaps = 17/288 (5%) Query: 6 ILLTLCT-SLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSAN 64 + LT C S T+ AK IG+ + DL+ D K A+ G K+ + + Sbjct: 19 LTLTGCAGSSNATSSGEAAKTYNIGVVVLDLQDPDLAHMTDAMKKTADEKGVKLNITDSK 78 Query: 65 GNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYD-RMINDADIDF 123 + ++++Q+E+++ R VD +++ P +G N K I + +D+ + Sbjct: 79 KDVGSELNQVEDLLTRQVDAVIMQPLDGDASQNAAKRVIAANIPLFILSTEFAEGSDVGY 138 Query: 124 --YISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVD---S 178 YI D+ G++QA+ L ++P G + A ++ A K D + Sbjct: 139 KSYIGVDDTVAGQMQAEYLNKLMPNGGNLVFA-------AGVYGASWTDRRKNGFDKTIN 191 Query: 179 GKIKVVGDQWVDGWLPENALKIMENALTA-NNNKIDAVVASNDATAGGAIQALSAQGLSG 237 K+V + G ++A + ME+ L + +IDAVVA+ND A GA A++ G + Sbjct: 192 ENFKIVAEFQAKGS-RDDAKRNMEDTLQRFPSGQIDAVVANNDEMAIGAASAIADAGRTA 250 Query: 238 KV-AISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNG 284 + A+ G D ++ I GT + TV + A E+ + NG Sbjct: 251 EFKAVVGVDGTEPALQDIEGGTMSATVRQDSAGQGVKAVEVVTDFLNG 298 >UniRef50_B8H228 Inositol ABC transporter, periplasmic inositol-binding protein IbpA n=3 Tax=Caulobacteraceae RepID=B8H228_CAUCN Length = 326 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 70/270 (25%), Positives = 125/270 (46%), Gaps = 9/270 (3%) Query: 16 LTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIE 75 +T A E ++ ++ +DL + R +A LG KV V A N Q+S ++ Sbjct: 28 MTGCARGGAEAEVVVSFNDLSQPFFVAMRRELEDEAAKLGVKVQVLDAQNNSSKQISDLQ 87 Query: 76 NMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDF-YISFDNEKVGE 134 +G V+++ P + + L+ + ++G+ V++ DR I ++ DN G Sbjct: 88 AAAVQGAKVVIVAPTDSKALAGAADDLVEQGVAVISVDRNIAGGKTAVPHVGADNVAGGR 147 Query: 135 LQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSG--KIKVVGDQWVDGW 192 A +V P G ++ + +++ + R +K + + +G K+V +Q + Sbjct: 148 AMADWVVKTYPAGARVVVITNDPGSSSSIER---VKGVHDGLAAGGPAFKIVTEQTANSK 204 Query: 193 LPENALKIMENALTA-NNNKIDAVVASNDATAGGAIQALSAQGL-SGKVAISGQDADLAG 250 + AL + +N LT+ + D ++ ND A GA++A+ A GL S KV + G DA Sbjct: 205 R-DQALTVTQNILTSMRDTPPDVILCLNDDMAMGALEAVRAAGLDSAKVKVIGFDAIPEA 263 Query: 251 IKRIAAGTQTMTVYKPITLLANTAAEIAVE 280 + RI AG TV + L TA AV+ Sbjct: 264 LARIKAGEMVATVEQNPGLQIRTALRQAVD 293 >UniRef50_C6B4I0 Periplasmic binding protein/LacI transcriptional regulator n=23 Tax=Bacteria RepID=C6B4I0_RHILS Length = 313 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 73/247 (29%), Positives = 105/247 (42%), Gaps = 9/247 (3%) Query: 50 KAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKV 109 KA+ LG + + + + + Q I+ I RG +++ VK+AK GI Sbjct: 52 KAKELGYETLLMTHDDDANKQSEMIDTAIGRGAKAIILDNAGADASVAAVKKAKDAGIPS 111 Query: 110 LAYDRMINDADIDF-YISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAG 167 DR IN + I +N + +L A+ V ++ +GNY + G D NA + G Sbjct: 112 FLIDREINATGVAVAQIVSNNYQGAQLGAQEFVKLMGEKGNYVELVGKESDTNAGIRSQG 171 Query: 168 QMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAI 227 V+ Y D +K V Q + W A ME L AN + I V++ ND A GAI Sbjct: 172 YHDVIDDYPD---LKSVAKQSAN-WSQTEAYSKMETILQANPD-IKGVISGNDTMAMGAI 226 Query: 228 QALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIA-VELGNGQE 286 AL A G V + G D I +G TV +P A A E A + N Sbjct: 227 AALQAAGRK-DVIVVGFDGSNDVRDSIKSGGIKATVLQPAYAQAQLAVEQADAYIKNKTT 285 Query: 287 PKADTTL 293 PK + L Sbjct: 286 PKEEKQL 292 >UniRef50_D1PGW4 Sensor protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PGW4_9BACT Length = 935 Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 67/242 (27%), Positives = 108/242 (44%), Gaps = 29/242 (11%) Query: 1 MKIK-NILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVF 59 MK K ++++ + +LLT A ++ IG + + W+ + +K E L + Sbjct: 1 MKRKLHLIIYVAIIVLLTGCAQKPRKFVIG--VSQCSEDIWRDKLNDELKMGEYLNDSLI 58 Query: 60 VQSANGNEET--QMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIN 117 V+ A+ N++ Q Q+ I+ GVD+L++ P +S V+ A +GI V+ YDR N Sbjct: 59 VKLASSNDDNVLQNKQVNQFIDEGVDLLIVSPNQLSAISKSVERAYDKGIPVILYDRKTN 118 Query: 118 DADIDFYISFDNEKVG---------ELQAKA-LVDIVPQGNYFLMGGSPVDNNAKLFRAG 167 +I DN +G +LQ K +V+I L G SP + F Sbjct: 119 SDKYTAFIGCDNYTIGKSMGTFIAQQLQGKGRIVEISG-----LEGSSPALERHRGF--- 170 Query: 168 QMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAI 227 M +KPY ++VV + W E ++ M+ L + D V A ND A GA Sbjct: 171 -MDAIKPY---PGLQVVASEE-GNWKEEGGIQAMKRILKQTQD-FDYVFAHNDCLAWGAY 224 Query: 228 QA 229 A Sbjct: 225 VA 226 >UniRef50_A0R773 Sugar ABC transporter substrate-binding protein n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0R773_MYCS2 Length = 332 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 67/249 (26%), Positives = 113/249 (45%), Gaps = 19/249 (7%) Query: 64 NGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD-ID 122 +G+ E Q++ IENM+ +GV ++I P + + + +K+A+ G+ V+A D + D +D Sbjct: 76 DGDNEGQVTAIENMVGQGVKGILITPNSSTGVLDAIKKARDAGVVVIALDTATDPEDAVD 135 Query: 123 FYISFDNEKVGELQAK----ALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPY-VD 177 + DN+ G Q K AL + PQ ++ G+P FR L+ + + Sbjct: 136 ATFATDNKAAGVAQGKWVKAALGNTPPQ--VVMLDGTP-GGTVDTFR--HDGFLEGFGLT 190 Query: 178 SGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSG 237 ++VG + +G A MEN L ++A+ N+ A GA QA+ A G + Sbjct: 191 DNSPEIVGQENTNG-DQTKAQTAMEN-LLQRAPGVNALYTINEPAAAGAYQAIQAVGRAD 248 Query: 238 KVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGL 297 +V I D G+ + AG TV + +A + V+ D T +G Sbjct: 249 QVTIGSIDGSCTGVADVKAGKIGATVMQFPAKMAELGVQAVVKFAE------DGTKPSGF 302 Query: 298 KDVPSRLLT 306 D S L+T Sbjct: 303 NDTGSELIT 311 >UniRef50_A9FWH4 LACI-type transcriptional regulator n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FWH4_SORC5 Length = 332 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 55/183 (30%), Positives = 87/183 (47%), Gaps = 20/183 (10%) Query: 70 QMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFY----- 124 Q++ + I +GVDV+VI P +KEAK+ GI V+ R + DA+ D Y Sbjct: 90 QVNAVNGFITKGVDVIVIAPQESVGWKPTLKEAKRAGIPVVLTSRGV-DAEEDLYETVMV 148 Query: 125 --ISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIK 182 ++ + GE AK + + G+P + A + + G + + + D +K Sbjct: 149 ADFVWEGRRAGEWLAKQTNG---KARIIELVGTPAADVAVMRKTGFAEAIAKHPD---MK 202 Query: 183 VVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAIS 242 ++ Q D + +ME L+A+ +I+AV A ND A GAIQA+ A GL Sbjct: 203 IIASQSGD-FTRTKGKTVMETLLSAHKGEINAVYAHNDDMALGAIQAIQAAGLK-----P 256 Query: 243 GQD 245 GQD Sbjct: 257 GQD 259 >UniRef50_C0B7M6 Putative uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0B7M6_9FIRM Length = 325 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 75/302 (24%), Positives = 130/302 (43%), Gaps = 27/302 (8%) Query: 28 IGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVI 87 +G A + K R E+ G + V A G+ Q QI++ I + +V+ Sbjct: 43 VGFANNSDTYNYCAKFRSYLKDATEAKGISITVTDAGGDTNVQNGQIDDFIVQNANVVSA 102 Query: 88 IPYNGQVLSNVVKEAKQEGIKVLAYDRMI---NDADIDFYISFDNEKVGELQAKALVDIV 144 I + ++ AK G+ +++ + +D D Y+ NE G+ Q + L D Sbjct: 103 ISNDLDGSIPALEAAKDAGLPYVSFLTSVSGGDDYDGYIYVGSPNEDAGKAQGEYLCDAF 162 Query: 145 PQGNYFL-MGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENA----LK 199 P G L G+P D + G + LK + IK++ D + EN+ + Sbjct: 163 PDGASILYFTGAPNDQQYVDRKKGLEEALKK---NPNIKIL-----DEYNVENSKDLGMS 214 Query: 200 IMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQ 259 E++L + + KIDA+V ND A G ++AL + G + + G D ++ I G Sbjct: 215 TAEDSLLSYD-KIDAIVCQNDDGALGVVEALKSAGKLDSIQVLGIDGSDDALQSIQDGEM 273 Query: 260 TMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTV 319 TMT + A A+I +L G +P +N +P +++T K+N+ D + Sbjct: 274 TMTALQDAKAQAEAGADIFEKLKKGTDPADIEDVN-----IPFKIVT-----KDNVADYL 323 Query: 320 IK 321 K Sbjct: 324 SK 325 >UniRef50_Q930Q0 ABC transporter, periplasmic solute-binding protein n=2 Tax=Sinorhizobium RepID=Q930Q0_RHIME Length = 321 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 55/180 (30%), Positives = 93/180 (51%), Gaps = 14/180 (7%) Query: 60 VQSANGNEETQMSQIENM-INRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIND 118 V S + Q+S +E++ R +D LVI+P+ + L+ V++ K+ G + DR + D Sbjct: 70 VLSTASSATAQVSALEDLSATRKLDALVILPFTSEELTGPVEQIKKNGTFISVVDRGLTD 129 Query: 119 ADI-DFYISFDNEKVGELQAKALVD-IVPQGNYFLMGGSP--VDNNAKLFRAGQMKVLKP 174 I D Y++ DN VG A+ L D + QG ++ G P +D+ ++K Sbjct: 130 PTIQDLYVAGDNIAVGANTARWLSDKLGGQGEIVVLRGIPTVIDDE-------RIKGFSD 182 Query: 175 YVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQG 234 +D IK++ Q+ + W + A K+M++ L A KIDAV A++D G I+A+ G Sbjct: 183 VIDKTNIKILDIQYAN-WNQDEAFKLMQDYL-AKYPKIDAVWANDDDMLLGVIEAVDRAG 240 >UniRef50_A6LHB1 Sensor protein n=4 Tax=Bacteroidales RepID=A6LHB1_PARD8 Length = 887 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 61/256 (23%), Positives = 113/256 (44%), Gaps = 16/256 (6%) Query: 6 ILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLE-RWQKD--RDIFVKKAESLGAKVFVQS 62 LL T ++L + K+ K + + L+ W++ D+ ++ + ++ ++ Sbjct: 5 FLLVWLTLIVLCGCTSSGKQKKHVIGLSQCMLDDAWRQAMINDMRIEASNYDDVEIIIKD 64 Query: 63 ANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADID 122 A N ETQ+ QI ++I + VDVL+I PY + ++ V +EA + GI + DR +N Sbjct: 65 AQNNNETQIQQIRDLIRQKVDVLIISPYQSEPITAVAEEAYRAGIPTIITDRKVNTDQYT 124 Query: 123 FYISFDNEKVGELQAKALVDIVPQGNYFL-MGGSPVDNNAKLFRAGQMKVLKPYVDSGKI 181 ++ +N ++G + +P L + G + A+ G + L+ D Sbjct: 125 SFVGANNYEIGLAAGNYAANYLPPNAIILEIWGLTQTSPAQERHKGFVDALREREDLSFR 184 Query: 182 KVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAI 241 K+ G WL + A ME + +ID V A ND A A + A +I Sbjct: 185 KIEGQ-----WLVDTAR--MELRKLEHPEQIDFVYAHNDMMAIAAREYFMAWD-----SI 232 Query: 242 SGQDADLAGIKRIAAG 257 G++ + G+ +A Sbjct: 233 RGRELRIIGVDAVAGA 248 >UniRef50_C0RMD7 Rhizopine-binding protein n=23 Tax=Brucella RepID=C0RMD7_BRUMB Length = 389 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 56/202 (27%), Positives = 106/202 (52%), Gaps = 15/202 (7%) Query: 50 KAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKV 109 K E L + + A GN +TQ+ QI++MI+ +D +VI + L V+ +A ++GI V Sbjct: 77 KKEGLVKDLMITDAQGNAQTQIQQIQSMIDANMDAIVIDAGSSSALDRVIADACEKGIAV 136 Query: 110 LAYDRMINDADIDFYISFDNEKVGELQAKALVD-IVPQGNYFLMGGSPVDNNAKLFRAGQ 168 + +D +++ ++ I+ D+ + GE A+ +VD + +G +M G + + R G Sbjct: 137 INFDSLVDTENLTAKINTDSAEWGERAAQWMVDQLGGKGKIIIMNGPAGVSVSDDRRKGA 196 Query: 169 MKVLKPYVDSGK-IKVVGDQWVDGWLPENALKIMENALTA---NNNKIDAVVASNDATAG 224 +P +D+ K I+++ + E + + A+T+ N +ID V++ + A A Sbjct: 197 ----QPVLDANKGIEIITET-----NTEYNVAPAQEAMTSLLFANPEIDGVLSLSGAIAA 247 Query: 225 GAIQALSAQGLSGKVAISGQDA 246 GA+ A QG V I+G++A Sbjct: 248 GAVLAFDRQGRD-PVPITGENA 268 >UniRef50_P49308 Putative rhizopine-binding protein n=37 Tax=Proteobacteria RepID=MOCB_RHIME Length = 309 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 76/297 (25%), Positives = 138/297 (46%), Gaps = 27/297 (9%) Query: 3 IKNILLTLCTSLLLTNVAAHAKEVKIGMAIDD------LR--LERWQKDRDIFVKKAESL 54 +K ++ + ++L++ AAHA+ + MA+ D LR +E + K D Sbjct: 1 MKKFIIGIAAAVLVST-AAHAETIGASMAVFDDKFGTLLRNGMEDYAKTLD--------- 50 Query: 55 GAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDR 114 G + ++ A + Q SQI+N I GVD +++ P + + + K A GI ++ +R Sbjct: 51 GVDLQIEDALNDVAKQQSQIQNFIAAGVDAIIVQPVDTDATTVMSKLAADAGIPLVYVNR 110 Query: 115 MINDADI----DFYISFDNEKVGELQAKALVDIVP-QGNYFLMGGSPVDNNAKLFRAGQM 169 + D +++ + G LQ + + ++ +G ++ G + N A R + Sbjct: 111 EPVNIDTLPEKQAFVASNEVDSGTLQTREICKLLDGKGKAVVIMGE-LSNQAARMRTKDI 169 Query: 170 KVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQA 229 + I++V +Q + W +M N L+A + DAV+A+ND A GAIQA Sbjct: 170 HDVLATDQCKGIEIVQEQTAN-WQRTQGADLMTNWLSA-GIEFDAVIANNDEMAIGAIQA 227 Query: 230 LSAQGLS-GKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQ 285 L A G S V I G DA + +AAG ++V++ + + A++L G+ Sbjct: 228 LKAAGRSMDSVVIGGIDATDDALAAMAAGELDVSVFQDAVGQGKGSIDAALKLSKGE 284 >UniRef50_C0D949 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D949_9CLOT Length = 352 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 52/186 (27%), Positives = 91/186 (48%), Gaps = 7/186 (3%) Query: 53 SLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAY 112 S+G +V AN + TQ++ +E+++ +G+D+LVI P + L ++ + G+ V+ Sbjct: 91 SVGFEVVWNEANNDTATQIANVEDLLAQGIDLLVIKPKEEEGLIPALEACRDAGVPVICL 150 Query: 113 DRMINDADIDFY-ISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRA-GQMK 170 DR ++D + I DN GE + LVD P G + + ++ R+ G Sbjct: 151 DRKVSDPSLYVTAIMTDNVAGGETVGQWLVDHYPDGCKIVEIVGTAGSTGQIERSKGLSN 210 Query: 171 VLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNK-IDAVVASNDATAGGAIQA 229 V+ Y +I+++ Q D + A + EN + A + ID +V ND A G +QA Sbjct: 211 VIDKY---DQIQIISSQVGDN-MRSEAQTVTENMIQAYGKEGIDVIVTQNDEMAMGCLQA 266 Query: 230 LSAQGL 235 L G+ Sbjct: 267 LWGLGI 272 >UniRef50_A8GD74 Periplasmic binding protein/LacI transcriptional regulator n=19 Tax=Enterobacteriaceae RepID=A8GD74_SERP5 Length = 309 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 79/318 (24%), Positives = 159/318 (50%), Gaps = 34/318 (10%) Query: 1 MKIKNILLTLCTSLLLTNVAAH--AKEVKIGMAI---DDLRLERWQKDRDIFVKKAESLG 55 MK+K +++T S+L+ + A AK++KIG+++ DD L ++ +K+ ++ Sbjct: 1 MKLKKLIVT---SVLMCMLPASVLAKDIKIGVSMAYFDDNFLTILRQSMQSKMKQDGNVS 57 Query: 56 AKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRM 115 + + A G+ Q+ QIEN +++GVD +++ P + Q + ++K A+ I ++ +R Sbjct: 58 GQF--EDAKGDIAQQIQQIENFVSQGVDAIILNPVDTQGVKPMIKLAESAKIPLVFVNRR 115 Query: 116 INDADIDF-----YISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQM 169 ++ Y+ D++ G+LQ + L ++ +GN ++ G + + G Sbjct: 116 ---PEVTLPAGMAYVGSDSKLAGKLQMEELAKLMNGKGNVMILMGELSNEATRDRTRGVE 172 Query: 170 KVLKPYVDSGKIKVVGDQWVDGWLPENALKIMEN-ALTANNNKIDAVVASNDATAGGAIQ 228 +V Y IK++ D+ W + A+ I + ALT +IDA+ ++ND A GAI Sbjct: 173 EVAAKYPG---IKIL-DKQTAKWGRKEAVDITTDWALTG--QQIDAIASNNDEMAIGAIL 226 Query: 229 ALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPK 288 AL SG V ++G D ++ I G ++V++ A + A++L G++ + Sbjct: 227 ALKQAKKSG-VLVAGVDGTPDALEYIKKGDLALSVFQDAKGQGEGAVQTAIQLVKGEKVE 285 Query: 289 ADTTLNNGLKDVPSRLLT 306 ++ +P +L+T Sbjct: 286 SNVL-------IPYQLIT 296 >UniRef50_Q7UNV9 Bifunctional carbohydrate binding and transport protein n=1 Tax=Rhodopirellula baltica RepID=Q7UNV9_RHOBA Length = 438 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 58/256 (22%), Positives = 120/256 (46%), Gaps = 11/256 (4%) Query: 40 WQKDRDIFVKKAESLGAKVFVQ--SANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSN 97 WQ + + E +GAK+ + S + + Q++ ++ +N VD +++ P + L Sbjct: 156 WQSVKHGAEQAGEEIGAKITFRGPSKENDRDEQINVVQGFLNARVDGILLAPLDADALVR 215 Query: 98 VVKEAKQEGIKVLAYDRMINDADIDF--YISFDNEKVGELQAKALVDIVPQ--GNYFLMG 153 VKEA + G+ V+ +D +N DF Y++ DN + G+L +A+ + + + G+ L+ Sbjct: 216 PVKEASRAGVPVVIFDSGLNTDPGDFVSYVATDNFEGGKLAGEAMANALGEKGGDVILLR 275 Query: 154 GSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKID 213 + G + + Y + I+V+ G E+A+ + L ++ D Sbjct: 276 YEQGSESTHQREEGFLYSIAEYSN---IRVLSSDQYAGTTTESAIDKAQALLNRFGDEAD 332 Query: 214 AVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAG-TQTMTVYKPITLLAN 272 + + TA GA++AL + L+GKV + D+ + + ++AG + + P+ + Sbjct: 333 GICTVCEPTAEGALRALRERKLAGKVKLVTFDSSDSLRESLSAGEVNAIVLQDPVAMGYQ 392 Query: 273 TAAEIAVELGNGQEPK 288 +A L G+ P+ Sbjct: 393 AVKTMAAHL-RGETPE 407 >UniRef50_Q2KAX1 Probable sugar ABC transporter, substrate-binding protein n=3 Tax=Rhizobium etli RepID=Q2KAX1_RHIEC Length = 307 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 71/287 (24%), Positives = 125/287 (43%), Gaps = 47/287 (16%) Query: 44 RDIFVKKAESLGA-KVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEA 102 ++ F++ ++S A +V AN + Q+ QI+N I + V+ +V++P + Q + V++A Sbjct: 47 KNAFIEASKSDPAVEVNFSDANNDVSKQLDQIDNFIAQKVNAIVVVPVDYQGIVPGVEKA 106 Query: 103 KQEGIKVLAYDRMINDADIDF-YISFDNEKVGELQAKALVDIVPQGNYFL-MGGSPVDNN 160 Q GI V+A I A + ++ N G LQ + + + +P+G L + G+P ++ Sbjct: 107 NQAGIPVIALG--IQSAGGKYTFVGSKNIDAGRLQGEYMKEHLPKGAKILYLEGTPGLSH 164 Query: 161 AKLFRAG-----------QMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANN 209 + + G + L D + V + W+ + Sbjct: 165 TQERKKGFEDALGRSDVTTLASLSANYDRAEGMKVTEDWIQSF----------------- 207 Query: 210 NKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITL 269 K DA+VA+ND A GA++AL V ISG D + I AGT + T+++ Sbjct: 208 PKFDAIVAANDQMALGALEALQGADRLKGVMISGVDGTADALNAIKAGTMSQTIFQDAAG 267 Query: 270 LANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPI-DVNKNNI 315 A A E+ L G+ D P+ L P + K+N+ Sbjct: 268 QAKAAFEVVEGLKKGE-------------DAPAEKLVPFASITKDNV 301 >UniRef50_A8RZI4 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RZI4_9CLOT Length = 347 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 59/218 (27%), Positives = 109/218 (50%), Gaps = 12/218 (5%) Query: 55 GAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDR 114 G ++ V A + + Q+S +E+++ +G+D+L + P + + + +++ + G+ V+ +D Sbjct: 97 GDELIVIDAQNDAQKQISMVEDLLTQGIDLLFLCPIDSASIKSSLEQCGKAGVPVVNFDT 156 Query: 115 MINDAD-IDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLK 173 + D D ++ I DN GEL A+ ++ +P+G+ + SP + G K Sbjct: 157 DVYDVDLVNTIIVSDNYYAGELVAEDMMKKLPEGSKVCILTSPSAEACIKRQNG----FK 212 Query: 174 PYVDSGKIKVVGDQWVDG-WLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSA 232 D G K+V + +DG +L I E+ L N + + A A ND +A G +QAL + Sbjct: 213 DKAD-GYFKIVSE--IDGKGDTATSLGIAEDVLQGNPD-LGAFYAINDPSAIGCVQALES 268 Query: 233 QGLSGKVAISGQDADLAGIKRIAAGTQTMTVYK-PITL 269 Q + V + G D G + I+ GT T + PI + Sbjct: 269 QKKT-DVLVYGVDGQPMGKQAISEGTMEATAAQSPINI 305 >UniRef50_B1I0V8 ABC-type sugar transport system periplasmic component-like protein n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I0V8_DESAP Length = 425 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 67/268 (25%), Positives = 112/268 (41%), Gaps = 23/268 (8%) Query: 57 KVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI 116 ++ + A G+ Q +E I + VD +VI Q+ +V+ I+V+A + Sbjct: 71 RITWRDAEGDARRQEKDVEQFIEQKVDAVVIQFVEPQMGPGIVRRLAMNRIRVVALETFA 130 Query: 117 NDADIDFYISFDNEKVGELQAKALVDIVP---QGNYFLMGGSPVDNNAK-------LFRA 166 DA +D Y++ + + GE QA+ +V +P G ++GG P D ++ F Sbjct: 131 PDAPLDAYVASEQVRAGEHQARFVVRNLPAGAPGRVLVLGGDPTDPISRNIIEGFTAFME 190 Query: 167 GQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGA 226 GQ + + GD P A + AL + AV+A + A A Sbjct: 191 GQPGFAVELREHPQ----GD-------PGRAAASVHEALA--TGPLGAVLAVDSRMAVSA 237 Query: 227 IQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQE 286 ++ L +GL +V G AD + + AG V LLA + + AV L Sbjct: 238 VEVLRQRGLLNEVMTVGVGADRTAAEALVAGDHDAEVDVRPDLLAQFSYDAAVGLARDGH 297 Query: 287 PKADTTLNNGLKDVPSRLLTPIDVNKNN 314 +T + +G VP+R++ V NN Sbjct: 298 WAYETQITSGDYTVPARMVPVRLVQGNN 325 >UniRef50_D2QME7 Two component transcriptional regulator, AraC family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QME7_9SPHI Length = 940 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 59/242 (24%), Positives = 108/242 (44%), Gaps = 11/242 (4%) Query: 58 VFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIN 117 + + A + Q+SQI+ +I++G+D+L++ P + V+++ + GI V+ DR I Sbjct: 83 LLYEDAENSTTRQISQIQALIDQGIDLLIVSPNEVAPFAKVIEDVFKRGIPVILLDRKIE 142 Query: 118 DADIDFYISFDNEKVGELQAKALVDIVP-QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYV 176 + YI DN ++G L + + + +G + G P + A+ G ++ L+ Y Sbjct: 143 TESYNAYIGGDNVEIGRLAGVFIGNHLKGKGRIVEIWGLPSSSPAQERHRGLLEELRKYP 202 Query: 177 DSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS 236 +K + QW + +++ L + +D V A ND A GA +G+ Sbjct: 203 GIQVVKELNGQWER----DTVGRVVAAELNTLKD-VDLVFAHNDVMALGAYAVCKQKGIE 257 Query: 237 GKVAISGQDA---DLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTL 293 K+ G DA AG++ I G + P A E A + G+ K + L Sbjct: 258 KKLDFVGIDALPGPNAGMQAITDGILKASFLYPTG--GEEAIETATRILAGKSVKREQVL 315 Query: 294 NN 295 N+ Sbjct: 316 NS 317 >UniRef50_UPI0001C31E06 ribose ABC transporter, substrate binding protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31E06 Length = 340 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 51/197 (25%), Positives = 97/197 (49%), Gaps = 8/197 (4%) Query: 70 QMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKV-LAYDRMINDADIDFYISFD 128 Q+ I+N + + D L++ P +G L +K A ++G+ V L D + D ++ D Sbjct: 93 QIDSIDNAVAQQPDGLIVSPIDGSALVPTIKGAVEDGVPVILLADGLSEDVGQLSFVGSD 152 Query: 129 NEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKL-FRAGQMKVLKPYVDSGKIKVVGDQ 187 ++G L+A + D + G M V+ + F Q + + + I++V D Sbjct: 153 FAEIGRLKATYIADRLGDGGTVAM----VNGTRGMSFVEEQGEAAREVFEERGIEIVDDV 208 Query: 188 WVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS-GKVAISGQDA 246 + P+ L +N LT +++ + A+ S D A G I+A++A+ ++ GK+ + G DA Sbjct: 209 YTKAITPDEGLTATQNILTRHSD-VGAIYYSGDDGALGGIRAIAARNIAPGKIVVVGTDA 267 Query: 247 DLAGIKRIAAGTQTMTV 263 + + + AGT +TV Sbjct: 268 NEGALAAVRAGTMALTV 284 >UniRef50_A3CKH1 Periplasmic sugar-binding protein (Ribose porter), putative n=6 Tax=Streptococcus RepID=A3CKH1_STRSV Length = 328 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 79/308 (25%), Positives = 139/308 (45%), Gaps = 36/308 (11%) Query: 19 VAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMI 78 V K+VKIG+ + + ++ KK G++++V+ +E Q QI+ + Sbjct: 37 VLPDEKQVKIGVTYMTMNNDFYKTLNAELEKKTNQQGSRLYVRDPELDEGKQSQQIDFFV 96 Query: 79 NRGVDVLVIIPY--NGQVLSNVVKEAKQEGIKVLAYDRMIN-DADIDFYISFDNEKVGEL 135 VDV+VI P N + + +++AK+ GIK++ D I+ D +D I DN + G L Sbjct: 97 REKVDVIVINPVKSNSPSIISSLQKAKKAGIKIIVVDAPISQDVKVDTTIVSDNYQAGVL 156 Query: 136 QAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDS----GKIKVVGDQWVDG 191 A+ ++ +P N L+ NA M ++ ++D+ K++ + G Sbjct: 157 IAQDMMKRLPSANILLLE----HRNA----VSAMDRIQGFIDTIEKQPSYKIISQKETLG 208 Query: 192 WLPENALKI---MENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADL 248 E ++ ++ L N V+A ND A GA+ A+ QGL K++I G D Sbjct: 209 QTEETMPQVKGALDEGLDFN-----VVMALNDRAAIGALAAIKNQGLDKKISIYGVDGS- 262 Query: 249 AGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPI 308 IK A T + T A+ +++G + + + G K S+ L P+ Sbjct: 263 PDIKNFLATTSD---------IEGTVAQSPIQMGR-KVAQVIELMQEG-KSYDSQYLIPV 311 Query: 309 D-VNKNNI 315 VN++NI Sbjct: 312 HLVNRDNI 319 >UniRef50_A5FXE6 Periplasmic binding protein/LacI transcriptional regulator n=9 Tax=Proteobacteria RepID=A5FXE6_ACICJ Length = 328 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 67/223 (30%), Positives = 99/223 (44%), Gaps = 8/223 (3%) Query: 54 LGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYD 113 LG V S NGN TQ++ I+ I R V +++ + VK A + G+ V D Sbjct: 69 LGYGTMVASHNGNAYTQLNLIKTAIARHVAAIILDNAGADSSISAVKLATKAGVPVFLID 128 Query: 114 RMINDADI-DFYISFDNEKVGELQAKALVDIVP-QGNYFLMGGSPVDNNAKLFRAGQMKV 171 R IN I I +N + +L+ ++ +G Y + G P D NAK+ G V Sbjct: 129 REINAKGIAKAQIVSNNFQGAQLEGTEFAKLMGYKGTYVELTGLPSDTNAKVRSQGVASV 188 Query: 172 LKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALS 231 LK + SG +K+V Q D W ++ + L A+ + I ++A ND A GA AL Sbjct: 189 LKHF--SG-MKMVAVQTAD-WSQSKGFQVTQTLLEAHPH-IKGLIADNDTMAMGAEAALL 243 Query: 232 AQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTA 274 A V ++G D I I G V +PI + A Sbjct: 244 A-AHKPNVIVTGFDGSPDVINSIRKGQIKADVLQPIATFSREA 285 >UniRef50_C4TWQ1 Periplasmic binding protein n=1 Tax=Yersinia kristensenii ATCC 33638 RepID=C4TWQ1_YERKR Length = 329 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 71/258 (27%), Positives = 120/258 (46%), Gaps = 27/258 (10%) Query: 1 MKIKNIL---LTLCTSLLLTNVAAHAKEVKIGM-AIDDLRLERWQKDRDIFVKKAES-LG 55 MKI N L + L S L T V A+A + M I LR W D + +KKAE G Sbjct: 1 MKIHNKLTLAVLLSFSALCTTVPAYAADETYSMVGIPKLR-SAWFNDYETGLKKAEKDFG 59 Query: 56 AKVFVQS-ANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDR 114 K + Q+ A+ +E+ Q+S I + I++G + L+++P N + V K+A+ + I V+ ++ Sbjct: 60 IKTYFQAPASADEQQQVSVIRDSISQGNNALLVVPNNASSVEPVFKQARAQNIVVITHES 119 Query: 115 MINDADIDFYISF-DNEKVGELQAKALVDIV-PQGNYFLMGGS---PVDNNAKLFRAGQM 169 +N + D+ + +N+K G +G + + GS P N +M Sbjct: 120 -VNQKEADYDVEMIENQKFGSYMMDQFAKHAGEKGEFAIYVGSLTVPAHNIWADAAIKRM 178 Query: 170 KVLKPYVDSGKIKVVGDQWVDGWLP----ENALKIMENALTANNNKIDAVVASNDATAGG 225 K P ++K+V +++ P NA + L + + V++ A G Sbjct: 179 KEKYP-----QMKLVAERF-----PVSEDRNASRQKTLELISTYPDLKGVLSFGSQGAPG 228 Query: 226 AIQALSAQGLSGKVAISG 243 A QAL +GL GK+ + G Sbjct: 229 AGQALREKGLVGKLTVIG 246 >UniRef50_B1G538 ABC-type sugar transport system periplasmic component-like protein n=1 Tax=Burkholderia graminis C4D1M RepID=B1G538_9BURK Length = 384 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 57/237 (24%), Positives = 115/237 (48%), Gaps = 11/237 (4%) Query: 57 KVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI 116 ++ + + N ++ Q + I+++I+RGVD+L++ + L VV A ++GI V+ DR I Sbjct: 93 QLLITNGNMDDAKQAADIQDLISRGVDLLIVSANTQKALDPVVTRAMKQGIPVVMVDRRI 152 Query: 117 NDADIDFYISFDNEKVGELQAKALVD-IVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPY 175 + + +++ + +G + A+ +V+ + +GN ++ G + + A +V Y Sbjct: 153 SSDNFVSFVTGSDAMMGRVWAQWIVEKLHGKGNVIMLAGQAGSSVSADREAAAHQVFSQY 212 Query: 176 VDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGL 235 IKV+ + D W P A + M+ + + I+AV ++ G+I+A A G Sbjct: 213 PG---IKVLDTVYSD-WSPVKAKQQMQAMIAKYGHNINAVWCAHGLPVAGSIEAFVAAGF 268 Query: 236 SGKVAISGQDADLAGIKRIAAGTQTMTV---YKPITLLANTAAEIAVELGNGQE-PK 288 ADL G ++A + + Y P + T+ ++A+++ GQ PK Sbjct: 269 KPGEIPPHTTADLNGPLQLALKYKIPMLEIGYPP--SMGGTSLDVALKVLQGQPLPK 323 >UniRef50_D1N9K7 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N9K7_9BACT Length = 319 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 54/166 (32%), Positives = 86/166 (51%), Gaps = 7/166 (4%) Query: 70 QMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDN 129 Q+S+IEN++ R V+ LV++P L+NV + A+++GI ++ DR ++ D ++ DN Sbjct: 76 QVSRIENLMVRNVNALVVLPQEPGPLTNVCEAARKQGIFLVTVDRGLDKPVQDVNVAGDN 135 Query: 130 EKVGELQAKALVDIVP-QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQW 188 G A+A+ + +G+ +M G P N A + ++ K IKV+ Q Sbjct: 136 AGFGRAAAQAIAGALDGKGDILVMEGIPCVVNTDRVTAFREEIAK----HPGIKVLESQS 191 Query: 189 VDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQG 234 W E LK+MEN L KIDAV +D GA++AL G Sbjct: 192 AY-WDTEKGLKLMENFLQ-KYKKIDAVWVGDDDVLLGAMKALKESG 235 >UniRef50_B1WQL3 Putative ribose ABC transporter n=1 Tax=Cyanothece sp. ATCC 51142 RepID=B1WQL3_CYAA5 Length = 380 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 62/232 (26%), Positives = 111/232 (47%), Gaps = 17/232 (7%) Query: 40 WQKDRDIFVKKAESLGAKVFVQSAN------GNEETQMSQIENMI-NRGVDVLVIIPYNG 92 WQ+ A+ LG K V+ G+ + Q+S I +I N +D LVI P + Sbjct: 92 WQQMEQGVQTVAQELGIKTLVKFTEEKPNTLGDVKKQISTILELIDNNDLDGLVIAPEDS 151 Query: 93 QVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVPQG----- 147 L ++++A Q+GIKV+ D I+ I +++FDN + G++ + ++ + Q Sbjct: 152 IQLVPIIEKATQQGIKVIVIDTPIDTDQILTFVTFDNFEGGQILGEWVIQKLTQSSRRNN 211 Query: 148 --NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENAL 205 N ++ GS + N R G ++ LK + ++++ + D W + A K++ A Sbjct: 212 KINILILEGSLHEENTIERRQGFLEGLKRANKNYSLEILDLKSAD-WETKKA-KMITQAW 269 Query: 206 TANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAG 257 ID ++A++D A GA +A+ SG + I+G D G+ I G Sbjct: 270 LEKFPTIDVIMAADDQMAVGASEAVQEANKSG-IIITGFDGTPYGLNAIKTG 320 >UniRef50_B8CZP2 ABC-type sugar transport system periplasmic component n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZP2_HALOH Length = 276 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 58/211 (27%), Positives = 104/211 (49%), Gaps = 5/211 (2%) Query: 24 KEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVD 83 ++VKIG+ + ++ + + ++ E A + + A +E+ Q I+ I VD Sbjct: 69 EKVKIGVTVATMKYDVFYLIKEAMFDNQERENATLIWKDAGYDEKRQAQHIDEFIKEKVD 128 Query: 84 VLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVD- 142 V++I P N +VK+ + I VLA R+ + +D YI +N ++G QA + D Sbjct: 129 VVIIHPVNPITSGKLVKKLSSKKIPVLALRRLPYEVGLDGYIPANNFRIGMEQAIYVADQ 188 Query: 143 IVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIME 202 I +G ++ G N+A+L G ++LK + G IK+V ++W + E A K Sbjct: 189 IDHEGKVVILKGDKKTNSAQLITWGNKQILKK--EPG-IKIVAEKWHEFDKVEEAAKTTR 245 Query: 203 NALTANNNKIDAVVASNDATAGGAIQALSAQ 233 AL + I A++A+N A A++ L + Sbjct: 246 QALEKYPD-IKAILANNSRLAMQAVKVLKEK 275 >UniRef50_Q0BAE1 Periplasmic binding protein/LacI transcriptional regulator n=3 Tax=Burkholderia RepID=Q0BAE1_BURCM Length = 321 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 77/304 (25%), Positives = 129/304 (42%), Gaps = 15/304 (4%) Query: 4 KNILLTLCTSLL---LTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFV 60 K+IL L + L+ A A + + + + +E W F K+A + G KV V Sbjct: 5 KSILSCLALGTISGALSTGADAANQPHVALLMPTQSVEYWALYIKGFQKEAAADGLKVDV 64 Query: 61 QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD 120 + N + Q +Q+E + + DV+V++P + + +++ Q I ++ + M + Sbjct: 65 KVTNYDANEQATQVEQTLAQKPDVIVLVPVDSSAMVPSIRKIDQARIPLVISNSMPDQKY 124 Query: 121 IDFYISFDNE---KVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVD 177 ++ F GE AKA++ + Y G V N + Q++ + +VD Sbjct: 125 SRYWKVFTGPNDISNGEAAAKAMIQGFKEKGYGDKGKVIVING-PMGTPPQVQRYQGFVD 183 Query: 178 SGK-----IKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSA 232 K I+VVG Q D W A T + + V ND+ G + A Sbjct: 184 GLKKNAPGIEVVGAQPAD-WDAVKAEAAASALFTQFKD-VKGVYTENDSQLRGVVTAAQR 241 Query: 233 QGL-SGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADT 291 GL K+ I G D G++ I+AG TV + AA+ A+EL G+ P+A Sbjct: 242 LGLEPSKLVIVGHGCDAGGVEAISAGKAYATVEQSPFDDGAYAAKAALELATGKTPRAVQ 301 Query: 292 TLNN 295 L N Sbjct: 302 YLPN 305 >UniRef50_A8GZV8 Monosaccharide-transporting ATPase n=29 Tax=Gammaproteobacteria RepID=A8GZV8_SHEPA Length = 299 Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 62/236 (26%), Positives = 105/236 (44%), Gaps = 7/236 (2%) Query: 50 KAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKV 109 KA LG K+ + + +++ +E++ RGV ++I P + ++N ++ A + I V Sbjct: 54 KAAELGYKLIALDSQNDPSKELANVEDLTMRGVKAILINPTDALAVTNAIRTANRANIPV 113 Query: 110 LAYDRMINDADIDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQM 169 L DR DI +I+ DN GEL + + + + + +A R Sbjct: 114 LTLDRTAAHGDIVSHIASDNIAGGELAGEFIAQQLGKNAKVIQLEGIAGTSAARERG--- 170 Query: 170 KVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQA 229 + V + +++ Q D + L +MEN L AN + + AV A ND A GA++A Sbjct: 171 EGFSNAVTANNFELLSSQPAD-FDRSKGLNVMENMLAANGD-VQAVFAQNDEMALGALRA 228 Query: 230 LSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQ 285 + A G + + G D GI + + TV + LL TA A + GQ Sbjct: 229 IEAAG--KDILVIGFDGTDEGIAAVRRQQLSATVAQQPELLGATAIMTADRILKGQ 282 >UniRef50_P39265 D-allose-binding periplasmic protein n=33 Tax=Bacteria RepID=ALSB_ECOLI Length = 311 Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 67/261 (25%), Positives = 116/261 (44%), Gaps = 18/261 (6%) Query: 14 LLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKV--FVQSANGNEETQM 71 L+L+ A A E + + L W + +A++LG V F + G+ ++Q+ Sbjct: 15 LMLSTSAFAAAEYAV--VLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQL 72 Query: 72 SQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIN-------DADIDFY 124 E++ N+ + P + L V A ++GI ++ D I+ +++ + Sbjct: 73 QLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAF 132 Query: 125 ISFDNEKVGELQAKALVDIVPQ--GNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIK 182 ++ DN VG A ++D + G ++ G + + + R G + K + +IK Sbjct: 133 VTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFK---KASQIK 189 Query: 183 VVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAIS 242 +V Q D W AL + N L N N I A+ +ND A G QA++ G +GKV + Sbjct: 190 LVASQPAD-WDRIKALDVATNVLQRNPN-IKAIYCANDTMAMGVAQAVANAGKTGKVLVV 247 Query: 243 GQDADLAGIKRIAAGTQTMTV 263 G D K + AG T TV Sbjct: 248 GTDGIPEARKMVEAGQMTATV 268 >UniRef50_C2CJZ2 Galactoside ABC superfamily ATP binding cassette transporter, binding protein n=2 Tax=Anaerococcus RepID=C2CJZ2_9FIRM Length = 362 Score = 60.8 bits (146), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 70/250 (28%), Positives = 111/250 (44%), Gaps = 35/250 (14%) Query: 36 RLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVL 95 +LE+ KD D ++ Q N+ TQ Q+ N+I +GVD + + + Sbjct: 77 QLEKLDKDDDSI---------ELVFQDGQNNQGTQTDQLNNIIAQGVDGIFMNIVDISAA 127 Query: 96 SNVVKEAKQEGIKVLAYDR-----MINDADIDF-YISFDNEKVGELQAKALVDIVPQGN- 148 ++ K GI ++R M D DF +I D + G++Q + L D+ +G+ Sbjct: 128 PTAMETIKASGIPTAFFNRDMTESMKEDDLKDFIFIGTDAPEAGKMQGQILTDLWKKGDM 187 Query: 149 ---------YFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDG-WLPENAL 198 Y ++ G + A+ +K LK D+G IKV + D W + A Sbjct: 188 DRNKNGVLDYVMLNGGLDNPEAQARTEFSVKTLK---DNG-IKVNEVAFQDAKWDTDKAK 243 Query: 199 KIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS-----GKVAISGQDADLAGIKR 253 M+ L N + IDAV+A+ND A GAI AL A G++ + + G DA + Sbjct: 244 TAMDTWLQTNQDNIDAVIANNDGMAIGAISALQAVGMNTGSSKDNMVVVGVDATDLAVAE 303 Query: 254 IAAGTQTMTV 263 I GT + TV Sbjct: 304 IDKGTMSGTV 313 >UniRef50_C0C4T0 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C4T0_9CLOT Length = 334 Score = 60.8 bits (146), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 58/212 (27%), Positives = 104/212 (49%), Gaps = 24/212 (11%) Query: 60 VQSANGNEE--TQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIN 117 VQ +G+ + TQ+ +EN+I + VD +VI P + VKEA+ GI V+ + I Sbjct: 82 VQVIDGHSDAPTQVDAVENLITQEVDCIVICPVDTVAPEAAVKEAQAAGIPVITWSEKIE 141 Query: 118 DADI-----DFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQ---- 168 AD ++ F+N G++ + ++D + + + V N +L G+ Sbjct: 142 GADAWIAVNNYDYGFEN---GKIAGQWILDNLDKQEDAKVMYVYVKENEQLIERGEGMMD 198 Query: 169 -MKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAI 227 + L P ++ ++ G E+ ++ +E L A + ++ +V SND+ A GA Sbjct: 199 GLASLAPDAETVAVQ-------SGNTTESGMEAVETTL-AKHPDLNVIVCSNDSVALGAY 250 Query: 228 QALSAQGLS-GKVAISGQDADLAGIKRIAAGT 258 +A+ + G S KV I+GQDAD ++ I+ T Sbjct: 251 EAMVSAGKSDAKVCITGQDADEKNLEYISQDT 282 >UniRef50_Q28MQ8 Periplasmic binding protein/LacI transcriptional regulator n=14 Tax=Alphaproteobacteria RepID=Q28MQ8_JANSC Length = 343 Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 56/221 (25%), Positives = 111/221 (50%), Gaps = 14/221 (6%) Query: 68 ETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADID----- 122 E+Q++ +EN I +GVD +V+ P + + + ++ A + GI V+ +D ++ ++ Sbjct: 109 ESQINAVENFITQGVDAIVVAPADSRAMVRPLRRAMEAGITVINFDVALDTGAMEQQGIE 168 Query: 123 -FYISFDNEKVGELQAKALVDIVPQ-GNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGK 180 ++ DN E+ AL + + + G ++ G+P +NA R G + + + Sbjct: 169 LAFVGPDNRMGAEMAGNALGEALGEGGRVVIIEGNPGADNATQRRLG----FEDAIATHG 224 Query: 181 IKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVA 240 ++++ + W E A ++ LTA+ + + V+A+ND+ A G I+AL A G + Sbjct: 225 LELL-ESRTAHWETEEANQVFAAMLTAHPD-LQGVMAANDSMAIGVIEALDAAGRD-DIL 281 Query: 241 ISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVEL 281 + G DA A + I G TV + +A A ++A+E+ Sbjct: 282 VVGFDAVPAVLPMIEDGRMLATVDQFGQAMAANAIDLALEV 322 >UniRef50_B6BMJ9 Periplasmic binding protein/LacI transcriptional regulator, putative n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BMJ9_9PROT Length = 307 Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 65/241 (26%), Positives = 115/241 (47%), Gaps = 17/241 (7%) Query: 59 FVQS-ANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIN 117 F+ S A + Q+ QIE+ I++GVD+L+ PY+ V+ +A + I V+ R + Sbjct: 61 FIYSDAKASASMQVKQIEDFISQGVDLLMTSPYDEDSTRQVISKAYKSNIPVVLVSRRVK 120 Query: 118 DADIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYV 176 D YI +N ++ + AK LV + +G L+ G N ++ G +V+ Y Sbjct: 121 GNDFTSYIHPENRQIAKDAAKYLVKKMNYKGTVLLLKGVAKTNVERMRTEGFFEVVNKYP 180 Query: 177 DSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS 236 + IKV+ + +L +A+ ++ L+A K DAV++ +D+ G G+ Sbjct: 181 N---IKVI--ERTANYLRRDAIIEVDKLLSA-GQKFDAVMSQSDSMLVGVRMVFKKYGIK 234 Query: 237 GKVAIS-GQDADLAGIKRIAAGTQTMT-VYKPITLLANTAAEIAVELGNGQ----EPKAD 290 ++ G D I G Q + VY +L A +A+IA+++ +G+ E K D Sbjct: 235 PSSLVTVGIDYIKPAQDAIRDGEQNSSFVY---SLCAKESADIAIKILSGESVAKEIKLD 291 Query: 291 T 291 T Sbjct: 292 T 292 >UniRef50_C0Z4C9 Putative ABC transporter substrate binding protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z4C9_BREBN Length = 328 Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 52/221 (23%), Positives = 103/221 (46%), Gaps = 10/221 (4%) Query: 68 ETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISF 127 + QM ++ I G + +V+ P + +VL +K ++ I +L D + ND+ + YI Sbjct: 83 QRQMELVQQAIADGSETIVVAPSDERVLREAIKLTRERAIPILVLDTVGNDSAVKSYIGT 142 Query: 128 DNEKVGELQAKALVDIVP-QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGD 186 DN +G + +V ++ +G L+G + NAK G + +L ++++V + Sbjct: 143 DNYDMGRKAFEKMVYLIEKKGQIVLLGTDRIKANAKRREQGVLDLLP---REMQVELVAN 199 Query: 187 QWVDGWLPENALKIME--NALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQ 244 + P + +I E L + ++ V+A + +TA G + L + GL KV I Sbjct: 200 ENA----PSDKKQIGEWTRELIRKHPQLKGVIALDSSTAIGVAEELESSGLRDKVKIVAI 255 Query: 245 DADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQ 285 D+ ++ + G + T+ + + + AVE NG+ Sbjct: 256 DSPPEVLEYLQEGIISATIIQKPLSMGYLGVKYAVEASNGE 296 >UniRef50_UPI000185D1D6 putative DNA-binding response regulator/sensor histidine kinase n=1 Tax=Capnocytophaga sputigena ATCC 33612 RepID=UPI000185D1D6 Length = 903 Score = 60.5 bits (145), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 63/247 (25%), Positives = 116/247 (46%), Gaps = 12/247 (4%) Query: 56 AKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRM 115 A+V ++S + Q++ IE I + VDVLV+ P + + V+++A Q+GI V+ DR Sbjct: 60 AEVLIRSVKDDTPKQIADIEWFIEQKVDVLVVSPNESEACTPVIEKAYQQGIPVILVDRK 119 Query: 116 INDADIDFYISFDNEKVGELQAKALVDIVP-QGNYFLMGGSPVDNNAKLFRAGQMKVLKP 174 I Y+ +N ++G+ + ++ +GN + G+ + G + LK Sbjct: 120 IATESYTAYVGANNYQIGKEAGLYAIGVLKGKGNIAEVRGTKGSTSDAERHKGFVDALK- 178 Query: 175 YVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQG 234 ++ ++++V + W +L +A M+ + + ID V A ND A G +A A Sbjct: 179 --NAPEVQIVAETW-GNFLQADAKTQMQQIFQEHPH-IDLVFAMNDPMAAGTHEA--AMQ 232 Query: 235 LSGKVA-ISGQDA-DLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTT 292 +GK+ I G DA GI+ I Q + P E+A+++ + Q + + Sbjct: 233 FNGKIPFIIGVDALQQVGIQNIENSVQDASFIYPTG--GEKVIELAMKILHKQPFQRENI 290 Query: 293 LNNGLKD 299 LN + D Sbjct: 291 LNTTVVD 297 >UniRef50_C1DLC8 ABC transporter substrate binding protein n=3 Tax=Gammaproteobacteria RepID=C1DLC8_AZOVD Length = 315 Score = 60.5 bits (145), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 60/257 (23%), Positives = 118/257 (45%), Gaps = 17/257 (6%) Query: 55 GAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDR 114 G + V+ + + Q+ Q+E+ I + VD +++ P + + + A + GI ++ + Sbjct: 63 GVTLQVEDSGSDVVRQLGQVESFIAQQVDAIIVNPADTAATGGITERATRAGIPLVYLNS 122 Query: 115 MINDADID---FYISFDNEKVGELQAKALVD-IVPQGNYFLMGGSPVDNNAKLFRAGQMK 170 + ++ D ++G++Q + L + + +G+ ++ G ++ + AG Sbjct: 123 RPEVREFPAGVVFVGTDERRLGQMQMEYLAEKMGGKGDLAILLGRLAHDDTRKRTAGVKD 182 Query: 171 VLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQAL 230 VL Y +I+VV +Q D W + L + N L+ + + DAVVA+ND GA AL Sbjct: 183 VLARYP---QIRVVEEQSGD-WQRDKGLDLTNNWLS-SGREFDAVVANNDEMGIGAAMAL 237 Query: 231 SAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKAD 290 G +V++ G D G+ IA G +T+ + + A ++A+ L + D Sbjct: 238 RQAGRR-EVSVGGIDGTPDGLAAIARGQLAVTLLRDPVAMGEEAVDVALRLVRKDVVQGD 296 Query: 291 TTLNNGLKDVPSRLLTP 307 +P L+TP Sbjct: 297 VW-------IPVHLITP 306 >UniRef50_A1WMZ2 Periplasmic binding protein/LacI transcriptional regulator n=11 Tax=Bacteria RepID=A1WMZ2_VEREI Length = 330 Score = 60.5 bits (145), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 100/181 (55%), Gaps = 14/181 (7%) Query: 55 GAKVFVQSANGNEETQMSQIENMINRG-VDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYD 113 G +V +++A+G E Q +Q+++M+ + LVI P+ L+ V + K +G+ VL D Sbjct: 73 GLQVVIKTASGGPE-QANQLQDMLTANKIGALVIFPFESAALTKPVAQVKAKGVYVLVVD 131 Query: 114 RMINDADI-DFYISFDNEKVGELQAKALVDIV-PQGNYFLMGG--SPVDNNAKLFRAGQM 169 R + D D Y+S+DN G++ A+ + + +G + G + +DN G Sbjct: 132 RGLTDPSAQDAYLSYDNTAFGKIPAEFMAKTLGGKGQVVALRGIATTLDNER---MDGFN 188 Query: 170 KVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQA 229 VLK ++ +IK++ ++ + W ++A K+M++ LT + IDAV A++D A G ++A Sbjct: 189 AVLK---NNPEIKLLDAKYAN-WNRDDAFKVMQDYLTRFAH-IDAVWAADDDMAVGVLKA 243 Query: 230 L 230 + Sbjct: 244 I 244 >UniRef50_B8ZUE5 Putative D-ribose-binding protein n=2 Tax=Mycobacterium leprae RepID=B8ZUE5_MYCLB Length = 345 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 65/252 (25%), Positives = 115/252 (45%), Gaps = 17/252 (6%) Query: 21 AHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINR 80 +H K + IG++ W + + LG + SA +E+ Q+S +E +IN+ Sbjct: 33 SHHK-LTIGVSYPTANSPFWNAYTRFIDEGSHQLGVYINAVSAEEDEQKQLSDVETLINQ 91 Query: 81 GVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIN-------DADIDFYISFDNEKVG 133 G+D L++ P + + +++ A Q I V+ DR +AD ++ +NEK G Sbjct: 92 GIDGLIVTPQSTSIAPTLLRIATQANIPVVVVDRYPGYAPGQNKNADYVAFLGPNNEKAG 151 Query: 134 ELQAKALVDIVPQGNYFL-MGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGW 192 A+AL + G+ FL +GG P ++ A+ +AG L+ + + ++V Q+ G Sbjct: 152 SGIAEAL--MAGGGSKFLALGGMPGNSVAQGRKAG----LESALTAVGHRLVQFQYA-GD 204 Query: 193 LPENALKIMENALTANN-NKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGI 251 + L EN L A+ +A+ ND GAI+A+ + G D I Sbjct: 205 SEDKGLAAAENMLQAHPAGDANAIWCFNDKLCQGAIKAVYNANREKEFIFGGMDLTPQAI 264 Query: 252 KRIAAGTQTMTV 263 I G T+++ Sbjct: 265 AAIENGLYTVSL 276 >UniRef50_Q48J93 Sugar ABC transporter, periplasmic sugar-binding protein n=4 Tax=Pseudomonas RepID=Q48J93_PSE14 Length = 308 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 72/299 (24%), Positives = 137/299 (45%), Gaps = 17/299 (5%) Query: 14 LLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQ 73 LLL + A +IG+ I + R + A ++ + A G+ Q++Q Sbjct: 11 LLLVSSQWAAASYRIGVTIARVDDNFMTYVRSGLEEAARKENVQLQFEDAQGDVVRQINQ 70 Query: 74 IENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADID---FYISFDNE 130 ++ +++ VD ++++P + +N+ + A + + ++ +R ++ + ++ ++ Sbjct: 71 VQGFLSQKVDAVIVLPVDTSATANMTRAAVEAKMPLVYVNRHPDERVLPKGVTTVASNDI 130 Query: 131 KVGELQAKALVD-IVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWV 189 + G+LQ + L + + +G L+ G N+ G +VLK Y I +V Q Sbjct: 131 EAGQLQMRYLAEKMGGKGTIALIMGDLAQNSTHDRSEGVKQVLKDY---PGITIVEQQTA 187 Query: 190 DGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS-GKVAISGQDADL 248 + W + + N L A DA+VA+ND A GA AL G + G+VAI G D Sbjct: 188 E-WQRNKGMDLTSNWLLAGRT-FDAIVANNDEMAIGAAMALQQAGKAKGEVAIVGIDGLP 245 Query: 249 AGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTP 307 G+ I G +V++ A TA + A+++ G+ A+ VP +L+TP Sbjct: 246 DGLAAIKRGMLAASVFQDPKAQATTALQSAIKMIKGEPVDAEVW-------VPFQLITP 297 >UniRef50_C5EKG2 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EKG2_9FIRM Length = 343 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 49/175 (28%), Positives = 88/175 (50%), Gaps = 17/175 (9%) Query: 49 KKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIK 108 +KA+ LG + A+GN Q S IE+M+++GV+ +++ P L + +K A GI Sbjct: 83 EKAKELGVNLIYTDASGNIAKQASDIEDMVSQGVEYIIVAPQEEDGLQSALKSAMDAGIG 142 Query: 109 VLAYDRMINDADIDFYIS-------FDNEKVGELQAKALVDIVP-QGNYFLMGGSPVDNN 160 V+ DR IN + Y + ++ E+V A+ ++++ +GN ++ G+ + Sbjct: 143 VILIDRSINGEAGNAYTTKVMSDFVWEAEQV----AQRVIEVTSGEGNVVIIQGTQGATS 198 Query: 161 AKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAV 215 + G M + +KV+ DQ + +P+ A ++MEN L A N ID V Sbjct: 199 TTERQKGFMDAIADT----DLKVISDQVANYSMPK-AQEVMENVLQAQGNDIDIV 248 >UniRef50_C2L0R0 Ribose ABC superfamily ATP binding cassette transporter, binding protein n=2 Tax=Clostridiales RepID=C2L0R0_9FIRM Length = 333 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 61/212 (28%), Positives = 108/212 (50%), Gaps = 11/212 (5%) Query: 49 KKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIK 108 ++A+ G + VQ A G+ Q+ Q+++ I + VD +VI P N ++++ A++ GI Sbjct: 82 EQAKEYGWTLDVQDAAGDANKQLGQVQDFITKKVDAIVIAPTNSAGSKSMIELAEKAGIP 141 Query: 109 VLAYDRMINDADIDFYISFDNEKVGELQAKALVDIV---PQGNYFLMGGSPVDNNAKLFR 165 V D + +D +++ DN+K G+L A+ +V+ + +GN ++ S +++ Sbjct: 142 VFTMD-IASDGKPVTHVATDNKKGGQLAAEYVVNNILTEKKGNVAVITYSEIESCVDR-E 199 Query: 166 AGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGG 225 G LK ++ IKVV Q G + A +M+N L N+N ID V D A G Sbjct: 200 TGFTDYLKE--NAPDIKVVDVQNYSG-DQQKAADVMQNMLLKNDN-IDVVFCVGDPAAIG 255 Query: 226 AIQALSAQGLSGKVAISGQDADLAGIKRIAAG 257 A+ +++A + K I G D + G+ I G Sbjct: 256 ALSSITAANAATK--IIGYDGNPEGVAEIKKG 285 >UniRef50_B1B7W7 D-ribose-binding periplasmic protein n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1B7W7_CLOBO Length = 325 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 72/249 (28%), Positives = 111/249 (44%), Gaps = 12/249 (4%) Query: 51 AESLGAKVFVQSANGNEET--QMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIK 108 A+ LG KV V N + Q S IE+ I +GVD LV+ P +A++E I Sbjct: 64 AKELGVKVQVLGPNAETDVVGQTSLIEDQIVKGVDALVVAPLQPNAAITTFDKAEKEKIP 123 Query: 109 VLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVPQGN-YFLMGGSPVDNNAKLFRAG 167 V+ D N ++ N G+L + + + +G+ ++ G P D G Sbjct: 124 VVLIDTDANWDKKKSFVGTGNIAAGKLGGEYISKKLKKGDEAIIIRGVPGDRTQDERTQG 183 Query: 168 QMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAI 227 K L ++ IKVV Q + E A+ +MEN L + N I V +ND A GA+ Sbjct: 184 AQKAL----EAAGIKVVEIQPANSE-REKAISVMENLLQTHPN-IKGVFCTNDEMALGAV 237 Query: 228 QALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEP 287 +AL G ++I G D +K I G T TV + + E AV++ G+ Sbjct: 238 KALQQAGKKNIISI-GVDGSPDALKSIKEGGLTGTVAQNSYDIGKKGVETAVKVLRGE-- 294 Query: 288 KADTTLNNG 296 K +T ++ G Sbjct: 295 KVETRIDTG 303 >UniRef50_B0MFL8 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MFL8_9FIRM Length = 312 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 15/209 (7%) Query: 28 IGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANG--NEETQMSQIENMINRGVDVL 85 IG+ E W K A LG KV + S + +E+TQ I +++ + +D L Sbjct: 44 IGVVTKSRSSEYWMSVCSGMEKAASDLGVKVIIMSPDTETDEKTQQQMIGSLLKKDIDAL 103 Query: 86 VIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVG-ELQAKALVDIV 144 + P N +K+A+++GI+V++YD I + + YI DNEKVG EL + Sbjct: 104 AVSPINSHNAKGYLKKAEEKGIQVVSYDTKILEKGVP-YIGIDNEKVGRELAQYMAAQMK 162 Query: 145 PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSG---KIKVVGDQWVDGWLPENALKIM 201 +G ++ G N + A ++K + Y+D KI + + +PE + Sbjct: 163 KKGLVGIISG----NLKQSSHASRLKGFRDYIDKNTDIKIAFTESGYSNLRMPEKEI--- 215 Query: 202 ENALTANNNKIDAVVASNDATAGGAIQAL 230 + L + ++ + A++ TA G ++ L Sbjct: 216 -SRLMREHPDLNGIFATSAVTALGIMEYL 243 >UniRef50_C6PN50 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PN50_9CLOT Length = 333 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 71/276 (25%), Positives = 130/276 (47%), Gaps = 32/276 (11%) Query: 6 ILLTLCTSLLLTNVA---AHAKEVKIGMAIDDLRLERWQ--KDRDIFVKKAESLGAKVFV 60 + L L + +++ N+ + + E IGM+ +L E W+ + +I + + K+ Sbjct: 18 VFLILFSLIIIENIRMKNSDSVEYVIGMSQANL-YEPWRISMNEEISNEAKKYKNIKIVY 76 Query: 61 QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD 120 + A G+ Q I+ ++N G+D+L++ + + L+ VV +A + + V+ DR + + Sbjct: 77 KDAGGDTNKQKKDIDELLNSGIDLLIVSINDSEKLTPVVSKAYK-SVPVVVLDRAVEGYN 135 Query: 121 IDFYISFDNEKVGELQAKALVDIV--PQGNYF----LMGGSPVDNNAKLFRAGQMKVLKP 174 YI DNEK+G K +VD++ +G L+ P + +K FR + Sbjct: 136 YSVYIGPDNEKIGREAGKMVVDLLGNSEGRVIEIQGLLNSHPDIDRSKGFREAIKQ---- 191 Query: 175 YVDSGKI--KVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSA 232 D+ KI V+G+ W + A +E L + N ID + A ND A GA +A Sbjct: 192 -CDNIKIVRTVIGE-----WQKDEAEDKIEELLKEDRN-IDIIFAHNDYMALGAYKAAYK 244 Query: 233 QGLS-----GKVAISGQDADLAGIKR-IAAGTQTMT 262 G++ G ++G++ L + R I GT T + Sbjct: 245 LGINNIKIIGVDGLTGENGGLDLVSRGILQGTFTCS 280 >UniRef50_C6W799 Monosaccharide-transporting ATPase n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W799_DYAFD Length = 310 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 62/238 (26%), Positives = 112/238 (47%), Gaps = 8/238 (3%) Query: 45 DIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQ 104 D KA+ +G ++ A + Q+ Q+E+ I +GVD +++ P + S +K A Sbjct: 51 DAMEAKAKEMGVELITVDAERSALKQVEQVESFIGQGVDAIIMNPAEVEASSPAIKLAMD 110 Query: 105 EGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVD-IVPQGNYFLMGGSPVDNNAKL 163 I ++ + + F S D E + K + + + +GN +M G + A++ Sbjct: 111 AKIPIINVNSETSAKPTAFVGSDDTESA-RIAMKYIAEKLGGKGNILMMHGF-MGQAAQI 168 Query: 164 FR-AGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDAT 222 R G +LK + +K++ +Q + W + + EN + + +KI+A+ A ND Sbjct: 169 KRDNGAKDILKA---NPGLKLLAEQSGE-WDRAKGMSLTENWIQSYGDKINAIFAQNDEM 224 Query: 223 AGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVE 280 GA++AL A GL GKV + DA ++ + GT TV++ A E AV+ Sbjct: 225 GMGAVKALEAAGLKGKVLVVSVDAIPDALQAVKKGTLDATVFQNAKEQGGKAIETAVK 282 >UniRef50_A8S4J8 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S4J8_9CLOT Length = 368 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 62/234 (26%), Positives = 112/234 (47%), Gaps = 20/234 (8%) Query: 40 WQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVV 99 +Q++ + F AE G KV + +++ + ++S I++MIN+GVD L I +N Sbjct: 75 YQRNVEGFQMGAEKDGNKVVILNSDYDVSKEVSNIDSMINQGVDGLCIFSFNESGAKIAA 134 Query: 100 KEAKQEGIKVLAYDRM-----INDADIDFYISFDNEKVGELQAKALVDIVPQGNYFLMGG 154 ++ + GI +++ D + N DI I FD ++G + D P N F++ G Sbjct: 135 EKCAKAGIPLVSTDSVGTALDNNGNDIVAAIDFDWTEMGNNYGQWFADNCPGENIFVITG 194 Query: 155 S----PVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDG-WLPENALKIMENALTANN 209 + P ++ A Q KV + GK K++ Q +G + P A+ + ++A+ A+ Sbjct: 195 NFESVPCQ---RINEAMQAKV----DELGKNKIIDIQ--EGEYNPSKAITVAQDAI-ASG 244 Query: 210 NKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTV 263 + N+ A G IQ L +QG+S + + Q+ AG+ I G T+ Sbjct: 245 KDFSVIFVMNEDMAAGIIQMLDSQGVSDQYKVVSQNGSPAGLPLIKNGKLDYTI 298 >UniRef50_A0JW81 ABC-type sugar transport system periplasmic component-like protein n=1 Tax=Arthrobacter sp. FB24 RepID=A0JW81_ARTS2 Length = 364 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 60/222 (27%), Positives = 107/222 (48%), Gaps = 22/222 (9%) Query: 50 KAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKV 109 +A +GA++ + ANG+ Q + ++ +I +GVDV+V+ P + + V+ K GI V Sbjct: 78 EASKVGARLELLDANGDTVRQNADVQTLITKGVDVVVMNPNDPIGVGPSVQALKDAGIPV 137 Query: 110 LAYDRMINDA---DIDFYISFDNEKVGELQA-----KALVDIVPQGNYFL--MGGSPVDN 159 + + ++ + D+ Y++ D E G L KAL G L +GG P D Sbjct: 138 VTVNSSLDKSLVPDMFCYVAEDQEHTGSLAGEVAAQKALEKYGDSGQIKLVGIGGFPGDV 197 Query: 160 NAKL----FRAGQMKVLK--PYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKID 213 + L F AG +V++ P V + K++ + W P+ AL + + TAN + + Sbjct: 198 LSDLRFNGFMAGWNRVMEKHPGVTTVKLETKYGE----WKPDKALAPIRDVATANPD-LK 252 Query: 214 AVVASNDATAGGAIQALSAQGLSGK-VAISGQDADLAGIKRI 254 + + +D GG +Q L GL G + ++ D + IK + Sbjct: 253 VIYSMSDVMHGGIVQGLQQAGLWGDGIIMASYDGGMGAIKEM 294 >UniRef50_Q01TB6 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01TB6_SOLUE Length = 323 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 64/235 (27%), Positives = 99/235 (42%), Gaps = 18/235 (7%) Query: 57 KVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI 116 K+ + A + Q++Q+E I + D+L++ P L+ V+ +A + I V+ +R I Sbjct: 61 KLVISDAQQDNSKQVAQVETFIRQKPDLLIVAPNERAALTAVMGQAMEAKIPVICLERDI 120 Query: 117 NDADIDFYISFDNEKVGELQAKALVDIV------PQGNYFLMGGSPVDNNAKLFR-AGQM 169 + YI DN +G L + +V + P GN M G + ++ R G Sbjct: 121 LQPNYTSYIHSDNVAIGRLAGQFIVGHLTKKYGKPAGNVVAMRGL-LGVEGEINRDRGAK 179 Query: 170 KVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQA 229 ++L Y + IK+V D D W+ A M L A KID V ND A GA Sbjct: 180 EILDKYPE---IKIVADPVAD-WIQAKAKDRMTEVLRA-QPKIDVVYGHNDPMAIGAYLG 234 Query: 230 LSAQGLSGK---VAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVEL 281 G + V + G GIK++ G T P L + A EI + Sbjct: 235 AKELGREKEMIFVGVDGLGGPAGGIKKVMDGVLAATFVYP--LWVDKAVEIGTRI 287 >UniRef50_D2C4W6 Putative secreted solute-binding lipoprotein n=1 Tax=Thermotoga naphthophila RKU-10 RepID=D2C4W6_THENR Length = 337 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 61/249 (24%), Positives = 116/249 (46%), Gaps = 24/249 (9%) Query: 10 LCTSLLLTNVAAHAKEVKIGMAIDDLRLERW---QKDRDIFVKKAESLGAKV---FVQSA 63 T L + +A VKI M + +K + V + +SLG V + + Sbjct: 7 FLTFLFFSILALAIDPVKIFMVPKFTGAPYFVATEKGARVAVNELKSLGLVVDFFYTGPS 66 Query: 64 NGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADI-D 122 N E Q+ I ++I + D L++ P + + LS+++K+A+Q GIKV+ YD + D + D Sbjct: 67 VANTEEQIRIISSLIEQKPDALIVSPNDAEALSSILKKARQNGIKVVTYDADVADPEARD 126 Query: 123 FYISFDNEKVGELQAKALVDIV-----PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVD 177 ++ N+ + LV++V P+ ++ P N + + +K Y+ Sbjct: 127 VFV---NQATFMSVGETLVELVAEGVGPEARIAIISADPNARN----QNAWIDAMKKYIQ 179 Query: 178 S--GKIKVVGDQWVDGW-LPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQG 234 K+K++ ++ G+ P +L+ ++ + A IDA+VA A +A+ G Sbjct: 180 EKYPKMKILTIKY--GYDRPAESLQAAQDIINAYYPNIDAIVAPTSVALPMAAEAVLKAG 237 Query: 235 LSGKVAISG 243 L GK+ ++G Sbjct: 238 LKGKIFVTG 246 >UniRef50_D2BKS5 Ribose ABC transporter, substrate binding protein n=16 Tax=Streptococcaceae RepID=D2BKS5_LACLK Length = 324 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 61/240 (25%), Positives = 111/240 (46%), Gaps = 9/240 (3%) Query: 25 EVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDV 84 E+ IG++I + + A+ K+ V A + TQ++ ++N I++ VD Sbjct: 48 ELNIGVSISTTNNPYFVSMNNAIKSMAKEKNTKLTVSDAQNDSATQLNNVQNFISQNVDA 107 Query: 85 LVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIV 144 ++I P + + +K A I V+A DR N + ++ DN G++ A+A+ +V Sbjct: 108 ILINPVDSDAIVPAIKAANNAHIPVIAMDRGSNGGTVLTTVASDNVAAGKMAAQAVEKLV 167 Query: 145 PQGNYFL-MGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMEN 203 + L + G+P +A + R K + + ++ Q + + L +N Sbjct: 168 GKNVKVLELSGTP-GASATIDRG---KGFNSEAKTLGLNILSSQSAN-FDRTTGLNTTQN 222 Query: 204 ALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTV 263 L ++ + + A+ A ND A GA +A+ A G K+AI G D + I AGT T T+ Sbjct: 223 MLQSHKD-VQAIFAQNDEMALGAAKAVQATGQ--KIAIFGIDGESETHDAIKAGTMTATI 279 >UniRef50_B0URZ9 Monosaccharide-transporting ATPase n=2 Tax=Gammaproteobacteria RepID=B0URZ9_HAES2 Length = 311 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 61/249 (24%), Positives = 111/249 (44%), Gaps = 16/249 (6%) Query: 8 LTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKV--FVQSANG 65 L C ++L + + + + L W ++ +A++LG V F + G Sbjct: 7 LKSCLAILGLVCSVSVYSAEYAVILKTLSNPFWVAMKEGIENEAKALGVDVDIFASPSEG 66 Query: 66 NEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIN-------D 118 + ++Q+ E++IN+ + P + L +A ++GI ++ D I+ Sbjct: 67 DYQSQLQLFEDLINKNYKGIAFAPLSPANLVMPAAKAYRKGIYLVNLDEKIDIKNLQKAK 126 Query: 119 ADIDFYISFDNEKVGELQAKALVDIVPQ--GNYFLMGGSPVDNNAKLFRAGQMKVLKPYV 176 +++ +I+ DN VG A+ +VD + G ++ G + + + R G +V +V Sbjct: 127 GNVEAFITTDNVAVGGKAAQFIVDKLGSEGGEVAIIEGKAGNASGEARRRGAREV---FV 183 Query: 177 DSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS 236 S IK+V Q D W AL + N L+ N N + A +ND A G QA+ G Sbjct: 184 KSSSIKLVASQPAD-WDRIKALDVATNVLSRNPN-LKAFYVANDTMAMGVAQAVINAGKQ 241 Query: 237 GKVAISGQD 245 GK+ + G D Sbjct: 242 GKILVVGTD 250 >UniRef50_C5RJT9 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Clostridium cellulovorans 743B RepID=C5RJT9_CLOCL Length = 330 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 56/202 (27%), Positives = 95/202 (47%), Gaps = 12/202 (5%) Query: 75 ENMINRGV----DVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNE 130 +N+IN V D L+++P + Q L V+ A +GI V+ D +N A I I+ DN Sbjct: 87 QNLINEAVAMKVDALLLVPSSFQELVEPVEAAVNKGIIVMTVDSKVNTAKIACCIATDNL 146 Query: 131 KVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLF--RAGQMKVLKPYVDSGKIKVVGDQW 188 G+ + LV + + + G + F G +V K Y +I+V+ D+W Sbjct: 147 SAGKSAGEKLVSLARMNSVAAIVGFDKKTGSNEFDRYKGIKEVTKDY---KEIQVI-DRW 202 Query: 189 VDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADL 248 D A +I + L +NN I ++A N + G +A+ GL GK+ + D D Sbjct: 203 CDIKDSNGAERIAKE-LISNNEDISVIIALNYKASIGVARAIEKLGLKGKIKVVAFDGDY 261 Query: 249 AGIKRIAAGT-QTMTVYKPITL 269 +K + GT Q++ + P ++ Sbjct: 262 QEVKYMEDGTIQSVVIQSPFSM 283 >UniRef50_B8HJG2 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HJG2_ARTCA Length = 319 Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 78/302 (25%), Positives = 132/302 (43%), Gaps = 17/302 (5%) Query: 8 LTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNE 67 L C+S A K KIG+ + D+ + + A S+GA Q A + Sbjct: 22 LAACSSGDTQPAAKPKKIEKIGLMVQDMSNPFFSAMDKGAKEAAASIGATANTQDAQLDL 81 Query: 68 ETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISF 127 Q +QI+ I +GV+++VI + + ++ AKQ GI V+A D AD + Sbjct: 82 ANQNTQIDTFIQQGVNLIVISAVDENGIQPAIERAKQAGIIVIAVDTPAKSADA--VVMT 139 Query: 128 DNEKVGELQAKALVD-IVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGD 186 D + GE + L + + +GN L+ G+P+ G V+K + IKVVG Sbjct: 140 DAVQAGEKSCQYLFEQMGGKGNVLLVDGTPLQTIRDRI-TGCNNVVKKFPG---IKVVGQ 195 Query: 187 QWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDA 246 Q + L + + LTA + + + ND +A GA+ A+ +G V ++G D Sbjct: 196 QASKNDR-ASGLAVTTDMLTATPD-VQGIFGMNDPSALGAVLAVQQAHKAGTVKVTGVDG 253 Query: 247 DLAGIKRI-AAGTQTM-TVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRL 304 + + +G+ M T + + A E+A + + + P T L +PS L Sbjct: 254 SPEAVAELKQSGSPFMGTATQNPAEMVRKAVEVAQNIIDNKPPAETTIL------IPSEL 307 Query: 305 LT 306 +T Sbjct: 308 VT 309 >UniRef50_A0LTR4 ABC-type sugar transport system periplasmic component-like n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LTR4_ACIC1 Length = 371 Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 69/228 (30%), Positives = 109/228 (47%), Gaps = 31/228 (13%) Query: 56 AKVFVQSANGNEETQMSQIENMINRG-VDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDR 114 AKV V AN N +TQ +Q +N I G D ++I P L ++VK+A +GIKV+ D+ Sbjct: 101 AKVTVFDANNNPQTQFAQFQNAITAGKYDGILIQPILATNLVDLVKQAVAKGIKVVDIDQ 160 Query: 115 MINDADIDFYISFDNEKVGELQAKALVDIVPQ-----GNYFLMGGSPVDNNAKLFRAGQM 169 ++ DF+ ++D + G + A+VD +P G + V NA G + Sbjct: 161 ILGP---DFH-TYDPQVPG--MSAAVVDRIPDIGRLLGEQVVAACQSV--NANPCNVGYL 212 Query: 170 KVLKPYVDSG--------------KIKVVGDQWVDGWLPENALKIMENALTANNNKIDAV 215 +K G IKVV + D + P LK +++ L A+ + + Sbjct: 213 YDIKASTLDGVIHDDFMKVVQGTPSIKVVAEGQ-DFFTPAGGLKAVQDMLQAHPDLT--L 269 Query: 216 VASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTV 263 + +D GA+QAL+A +GKV + G A AGI+ +A+G TV Sbjct: 270 IVGSDQGIEGAVQALAAAKKTGKVLLVGFGASAAGIQGVASGQWFSTV 317 >UniRef50_B1Y299 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y299_LEPCP Length = 318 Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 49/188 (26%), Positives = 92/188 (48%), Gaps = 13/188 (6%) Query: 64 NGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDF 123 N + ++Q+ ++ GVD +VI P + L V++A + GIKV+ D ++ + Sbjct: 68 NDDTDSQIRILQYYTRAGVDAIVITPTDRSRLVGPVEQAVRMGIKVVVVDSALDGSGHLQ 127 Query: 124 YISFDNEKVGELQAKALVDIVPQ-GNYFLM----GGSPVDNNAKLFRAGQMKVLKPYVDS 178 +++ DN G+L A+ L +++ Q G L+ G + D+ A+ F + L ++ Sbjct: 128 FVTTDNHASGQLAARQLAELMGQRGRVVLLRTVAGSASTDDRARGF----IDYLS--ANA 181 Query: 179 GKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGK 238 I +V D + G + +AL A + DA+ A N++ G ++AL GL+G+ Sbjct: 182 PAISIVADVYGGG--SAGKARHSASALLAKSADFDAIFAVNESATDGMLRALREAGLAGR 239 Query: 239 VAISGQDA 246 G D+ Sbjct: 240 KRFIGFDS 247 >UniRef50_D2LSY2 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LSY2_BACS4 Length = 314 Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 71/276 (25%), Positives = 126/276 (45%), Gaps = 51/276 (18%) Query: 59 FVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIND 118 ++ + N Q++ +E++I +GVD +V++P LS + + ++ GI ++ DR + + Sbjct: 65 YIFTTADNPSAQVNNVEDLIAQGVDAIVMLPIESDALSPIALQVEEAGIPLVIVDRELTN 124 Query: 119 ADIDFYISFDNEKVGELQAKALVDIVPQGNYFL--MGGSPVDNNAKLFR-AG-------- 167 + DN G V G YF+ +GG N K+ AG Sbjct: 125 DAATVVVKGDNYGAG----------VNAGEYFMEQLGG-----NGKVVEIAGPSNSVTQQ 169 Query: 168 QMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAI 227 + + ++ I++V Q + + E +L++MEN LT+ +IDAV +D A G + Sbjct: 170 RSDGFREAIEGSDIEIVASQSGE-FSTETSLQVMENILTSQP-EIDAVYTQDDGMALGVL 227 Query: 228 QALSAQGLSGKVAISGQDADLAGIKRIAA-----GTQTMT-VYKPITLLANTAAEIAVEL 281 QA++ + I+G +AG K + G T T +Y P L+ I +L Sbjct: 228 QAINEANRTDIQFITG----VAGSKDVYEIIMDDGLITATFLYSP--LMVKEGVIIGADL 281 Query: 282 GNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKD 317 NG++P + + VP+ TP V K+N+ D Sbjct: 282 ANGEDPDSAEVV------VPA---TP--VTKDNVDD 306 >UniRef50_C7QZ43 Periplasmic binding protein/LacI transcriptional regulator n=8 Tax=Actinobacteridae RepID=C7QZ43_JONDD Length = 328 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 11/216 (5%) Query: 59 FVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIND 118 + + N ++++Q+ + ++ GVDV+++ G + + A++ I V+ DR I Sbjct: 73 YAPATNLDQKSQIDAFTSFVDEGVDVILLSATEGSGWEDSLSRAQEAEIPVILIDRGIEP 132 Query: 119 ADIDFY---ISFDNEKVGELQAKALVDIVPQG-NYFLMGGSPVDNNAKLFRAGQMKVLKP 174 + D Y I+ DN V A+ +P+G NYF++ G + G V+ Sbjct: 133 DNTDLYVTRIAPDNIAVSTSVAEWAKTALPEGGNYFVLEGPAGVSVVNERNEGWDAVIGA 192 Query: 175 YVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQG 234 K+ G Q + W E A + E L +NNN + V A ND GA QA+ G Sbjct: 193 ESSFTKL---GAQTAN-WSTEEAKSVFETVLKSNNNDVQLVFAQNDEMGLGAAQAIEEAG 248 Query: 235 LSG--KVAISGQDADLAGIKRIAAGTQTMTV-YKPI 267 L+ V I+ D ++ +AAG + Y P+ Sbjct: 249 LTPGEDVKIATIDGTKGALEALAAGRLSFVAEYNPL 284 >UniRef50_C1D6L9 XylF, D-xylose ABC transporter, periplasmic D-xylose-binding protein n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D6L9_LARHH Length = 154 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 1/131 (0%) Query: 201 MENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQT 260 M L ++ KID V+A ND A AI+A+ G+ KV + G DA+L +KR+ G Q Sbjct: 1 MTKILKQSDGKIDGVLAHNDVLAEAAIEAIKDYGIKNKVMVVGMDAELPALKRLVRGEQD 60 Query: 261 MTVYKPITLLANTAAEIAVELGNGQEPKADTTL-NNGLKDVPSRLLTPIDVNKNNIKDTV 319 TVY +LA +A ++A + + + + + + + V K N+ + Sbjct: 61 ATVYMDSKVLAASAMDVAYVMVKNKPFTVNGRFETRSGEQIDAYFINGQIVTKENLHRLI 120 Query: 320 IKDGFHKESEL 330 + G ++E +L Sbjct: 121 VDTGVYREEDL 131 >UniRef50_B1ZDA2 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Methylobacterium populi BJ001 RepID=B1ZDA2_METPB Length = 308 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 64/243 (26%), Positives = 112/243 (46%), Gaps = 18/243 (7%) Query: 51 AESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVL 110 A A V V A G ETQ+ Q ++ L++ P + + + + GI ++ Sbjct: 52 ASKFSASVEVAQAAGKGETQVVQARAALDAKPAALIVTPVDDASARTITEMSAAAGIPLV 111 Query: 111 AYDRMINDADIDFY--ISFDNEKVGELQAKALVD-IVPQGNYFLMGGSPVDNNAKLFRAG 167 +R + + +S ++ G +Q + L + +GN ++ G DN A+ AG Sbjct: 112 FVNRRPSGPVTNRMAIVSANHLVAGRVQMRMLAQRLGDRGNVAILRGKDSDNAAQERTAG 171 Query: 168 QMKVL--KPYVDSGKIKVVGDQWVDGWLPENALKIMENALTA---NNNKIDAVVASNDAT 222 ++L +P +K++ + D W A ++ +TA + K DA+ A+ND Sbjct: 172 VKEILGQRP-----GLKLLAEASAD-WSRRQA----QDQVTAWLRSGLKFDAIAANNDEM 221 Query: 223 AGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELG 282 A GA+ AL A GLSGK+ + G D GI + +G +++V + L A AV+L Sbjct: 222 ALGAVAALKAAGLSGKILVGGVDGTSDGIAAVKSGDVSVSVLQDAPLQGAQAVNDAVKLA 281 Query: 283 NGQ 285 G+ Sbjct: 282 RGE 284 >UniRef50_A1TPE5 Periplasmic binding protein/LacI transcriptional regulator n=5 Tax=Bacteria RepID=A1TPE5_ACIAC Length = 322 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 68/229 (29%), Positives = 100/229 (43%), Gaps = 27/229 (11%) Query: 51 AESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVL 110 A G ++ A +E Q+ I + I + VDV+ P V++EAK I V+ Sbjct: 57 ARDAGIELKFSDAQQKQENQIKAIRSFIAQRVDVIAFSPVVESGWEPVLREAKAAKIPVV 116 Query: 111 AYDRMINDADIDFYISF-------DNEKVGEL------QAKALVDIVP-QGNYFLMGGSP 156 DR +N D Y++F + K G AK V+IV QG +G +P Sbjct: 117 LTDRAVNTKDTSLYVTFMGSDFVEEGRKAGRWLVEKMKDAKGDVNIVELQGT---VGSAP 173 Query: 157 VDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVV 216 + K F +V+K K K++ Q D + ++ME L A KI+ + Sbjct: 174 AIDRKKGFE----EVVKA---DPKFKIIRSQTGD-FTRAKGKEVMEAFLKAEGRKINVLY 225 Query: 217 ASNDATAGGAIQALSAQGLS-GK-VAISGQDADLAGIKRIAAGTQTMTV 263 A ND A GAIQA+ GL GK + I DA + + AG +TV Sbjct: 226 AHNDDMAIGAIQAIEEAGLKPGKDITIISIDAVKGAFEAMMAGKLNVTV 274 >UniRef50_A6W303 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Marinomonas RepID=A6W303_MARMS Length = 325 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 76/265 (28%), Positives = 126/265 (47%), Gaps = 14/265 (5%) Query: 28 IGMAIDDLRLERWQKDRDIFVKKAESLGA---KVFVQSANGNEETQMSQIENMINRGVDV 84 IG+++ DL + + + KAE L K+ ++S + + Q+ QI + I++ VD+ Sbjct: 53 IGISVADLGNPYFVQLVETASVKAEELAGEPVKMLIRSDAYDWQRQIGQINDFIDQKVDL 112 Query: 85 LVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVD-I 143 +V+ + ++ VV +A++ GIKV+A D +N D I+ DN + G + + L + I Sbjct: 113 IVLTAADEYKVAAVVAKAQRAGIKVIAVD--VNAQGADATITTDNVQAGAIACEKLAEKI 170 Query: 144 VPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMEN 203 QGN+ ++ G V + + AG L Y D I ++ D+ E ++ M Sbjct: 171 NYQGNFVIINGVLVSSVIERV-AGCKSALNKYPD---ITLLSDRMNGTGSVEGGMEAM-T 225 Query: 204 ALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAG--IKRIAAGTQTM 261 L + IDAV ND TA GA++A V S A A IK+ Sbjct: 226 YLMEEYDHIDAVFTINDPTAFGALRAAQQANRKEFVLASIDGAPFATEIIKQQDNPWIAT 285 Query: 262 TVYKPITLLANTAAEIAVELGNGQE 286 V +PI +A A EI ++L G+E Sbjct: 286 AVQRPIP-MAEKAIEIGMDLLKGKE 309 >UniRef50_Q6KIS4 Xylose solute binding protein n=1 Tax=Mycoplasma mobile RepID=Q6KIS4_MYCMO Length = 538 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 78/288 (27%), Positives = 113/288 (39%), Gaps = 48/288 (16%) Query: 21 AHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGN----EETQMSQIEN 76 A+ K I A D +RW ++ LG F GN + Q + ++N Sbjct: 170 ANFKNGAIATAFGDNTNKRWDDALKFSLQNTTQLGFTTF-----GNNTISQPNQNTFLQN 224 Query: 77 MI-NRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI-NDAD-IDFYISFDNEKVG 133 I N V + + + + A G V+AYDR+I ND+ +FY +FDN VG Sbjct: 225 QISNNNVKGIALGASESAGVGASLTSAATAGKPVVAYDRLILNDSSSYNFYTTFDNVGVG 284 Query: 134 ELQAKALVD-----IVPQGNY------------------FLMGGSPVDNNAKLFRAGQMK 170 LQ AL P N L G P DNNA+LF G Sbjct: 285 TLQGLALASGLVGRTTPFANTNEMTTFINNMENKPVISAMLFAGDPADNNAQLFFNGAKA 344 Query: 171 VLKPYVDS--GKIKVVGDQWVD-----GWLPENALKIMENALTANN----NKIDAVVASN 219 VL + + +G + + GW A + + A N N + ++A N Sbjct: 345 VLDAFKTAYGTNFSYLGAEDFNSVSTAGWNATTARNNYQTRIDAANETQRNSLRGILAPN 404 Query: 220 DATAGGAIQALSAQGLS-GKVAISGQDA-DLAGIKRIAAGTQTMTVYK 265 D A I L A L K+ ++GQD+ D + + G Q+MTV K Sbjct: 405 DNLAISIIGGLRATRLDLSKIYVTGQDSIDTSVVNIKNKGGQSMTVLK 452 >UniRef50_C7G6I7 D-galactose-binding periplasmic protein n=3 Tax=Clostridiales RepID=C7G6I7_9FIRM Length = 367 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 79/322 (24%), Positives = 146/322 (45%), Gaps = 33/322 (10%) Query: 24 KEVKIGMAI----DDLRLERWQKDRDIFVKKAESLGAKVFVQS--ANGNEETQMSQIENM 77 K +KIG+++ D E + D KK E G + + + A+ ++ TQ SQ+ENM Sbjct: 51 KSIKIGISVYDQYDTFVSEMMKDFNDYATKKEEETGVAINIDTYNASASQSTQNSQVENM 110 Query: 78 INRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADID-----FYI---SFDN 129 I G DV+ + + + ++ A++ I V+ ++R + + D++ +Y+ +F++ Sbjct: 111 ITEGCDVICVNLVDRTDPTAIIDLAEKNNIPVIFFNRELVEEDLERWTRLYYVGAQAFES 170 Query: 130 EKV-GELQAKALV---------DIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSG 179 + GEL A+A + D + Q Y ++ G +A + + + +DSG Sbjct: 171 GIMQGELAAEAFLTDQSLDKNGDGIFQ--YVVLEGEAGHQDAIVRTEYSVSTM---IDSG 225 Query: 180 -KIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGK 238 +++ +G + W A M ++ + I+ V+A+ND A GAI AL A GL+ Sbjct: 226 VEVEKLG-YAIANWNRAQAQTKMAQLMSQFGDSIELVIANNDDMALGAIDALKASGLTKD 284 Query: 239 V--AISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNG 296 A+ G D G++ + TVY A+ +A EL G + ++ Sbjct: 285 EWPAVIGIDGTDVGLEAVKNKEMIGTVYNDKEGQADAMLNLAYELSTGSDLSDLNLIDGK 344 Query: 297 LKDVPSRLLTPIDVNKNNIKDT 318 +P +T DV+ DT Sbjct: 345 YIRLPYARVTCDDVDSYMEGDT 366 >UniRef50_B0PA90 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PA90_9FIRM Length = 338 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 69/271 (25%), Positives = 125/271 (46%), Gaps = 16/271 (5%) Query: 25 EVKIGMAIDDLRLERWQKDRDIFVKKAESLGAK-VFVQSANGNE-ETQMSQIENMINRGV 82 ++ G+ + + W +D + +++G + VF A+ N+ + Q+S +EN+IN V Sbjct: 50 KLTFGLVVMSTNSDYWLTLKDGAQEAVDAIGGELVFTGPADNNDIQGQVSLMENLINSKV 109 Query: 83 DVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVD 142 D +++ P + L+ V++A GI V+ D +N +I+ DN G + + L++ Sbjct: 110 DAILLTPLDSDALAAPVEKAMDAGIPVIVIDSAVNTDKYTSFIATDNVAGGRMAMERLIE 169 Query: 143 IVPQGNYFL----MGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENAL 198 + + + G P N+A R + VD I V+ Q A+ Sbjct: 170 SIGGSGEVVVVNALAGIP-SNDA---RGQGAEEYAATVDG--ITVLPQQHC--LDQAEAM 221 Query: 199 KIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGT 258 EN + N N + + A+ + A GA QA+ ++G +G++ + DAD IK + GT Sbjct: 222 TATENVIIGNPN-LKGIFATFNRGALGAAQAIVSKGKAGEIKMVAFDADADEIKLLEDGT 280 Query: 259 QTMTVYKPITLLANTAAEIAVELGNGQE-PK 288 V + + E AV+ NG+E PK Sbjct: 281 IDALVVQQPYEMGKIGIEYAVKALNGEEVPK 311 >UniRef50_B8I0K4 Periplasmic binding protein/LacI transcriptional regulator n=11 Tax=Clostridiales RepID=B8I0K4_CLOCE Length = 342 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 73/253 (28%), Positives = 110/253 (43%), Gaps = 29/253 (11%) Query: 51 AESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVL 110 +E G K+ A +E Q+ + + I++ VDV+ I P V+ EAK I V+ Sbjct: 76 SEKNGFKLIFADAQQKQENQIKAVRDFISQDVDVIAIAPVTETGWETVLGEAKDADIPVI 135 Query: 111 AYDRMI---NDADIDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAG 167 DRMI +D+ ++ D +K G A+ LV NY G N + + Sbjct: 136 IVDRMIKVSDDSLFSCWVGSDFQKEGVNAAEWLV------NYMKEKGKTDKQNVVVLQG- 188 Query: 168 QMKVLKPYVDSGKIKVVGD------------QWVDGWLPENALKIMENALTANNNKIDAV 215 + + G+ K GD Q + ++ME+ L N+ ID V Sbjct: 189 ---TIGSSAEIGRTKGFGDTIKKYDNFNILAQQTGEFTQAKGQEVMESFLKQYND-IDVV 244 Query: 216 VASNDATAGGAIQALSAQGLS-GK-VAISGQDADLAGIKRIAAGTQTMTVYKPITLLANT 273 +A ND A GAI AL A G + GK V I DA A K + AG ++V + L Sbjct: 245 IAQNDNMAFGAIDALKAAGKAPGKDVTIVSFDAVKAAFKSMIAGDMNVSV-ECNPLHGPR 303 Query: 274 AAEIAVELGNGQE 286 AE+A +L N ++ Sbjct: 304 VAELAKKLMNDEK 316 >UniRef50_A7NMH5 ABC-type sugar transport system periplasmic component-like protein n=2 Tax=Roseiflexus RepID=A7NMH5_ROSCS Length = 372 Score = 58.2 bits (139), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 76/281 (27%), Positives = 141/281 (50%), Gaps = 31/281 (11%) Query: 57 KVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI 116 ++ ++SA+ + Q+ Q++N+IN+GVD +++ P + L++ ++EA +GI V++ D+ + Sbjct: 86 ELVIESADTDVAGQIQQLQNLINKGVDAILVNPSDVNGLNDTLQEAINKGIIVISVDQEL 145 Query: 117 NDADIDFYISFDNEKVGELQAKALVD-IVPQGNYFLMGGSPVDNNAKLFR-AGQMKVLKP 174 N + + + D ++ ++ A+ L + + QGN L+ G P + A + R G +VLK Sbjct: 146 NTPGV-YNVGIDQKEWAKISARWLAEKLGGQGNIVLIEGFP-GHPANVARMEGVEEVLKE 203 Query: 175 YVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQG 234 Y + IKV+G + W ++M N L + N +D + D A GA+QA+ A Sbjct: 204 YPN---IKVLGRE-TGKWDEATGQQVMSNFLASFPN-LDG-YWTQDGMAIGAMQAVMAAN 257 Query: 235 LSGKVAISGQ---------DADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQ 285 S + G+ D L + +T+ V P ++ T IA+ + G+ Sbjct: 258 PSKWPVLVGEGRCQFLQLWDQRL----KEDPNFETIAVANPPG-VSPTGLRIAINMLQGK 312 Query: 286 E-PKADTTLNNGLKDVPSRLLTPIDVNKNNIKD---TVIKD 322 + K+ NGL V + P+ V K+N ++ TV KD Sbjct: 313 QVDKSKLGGANGLSFV---IPVPVIVTKDNFQEVFTTVCKD 350 >UniRef50_C9MXF0 Putative uncharacterized protein n=1 Tax=Leptotrichia hofstadii F0254 RepID=C9MXF0_9FUSO Length = 328 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 10/230 (4%) Query: 25 EVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKV-FVQSANGNE-ETQMSQIENMINRGV 82 ++KI + + E W+ K E LG +V F+ E Q+ +EN IN+ V Sbjct: 37 KIKIELVSKGYQHEFWRSVEAGAKKAGEELGVEVNFIGPEKETEIGKQVGMVENAINKKV 96 Query: 83 DVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVD 142 L I + L+ V K+A I V+ +D + +I+ DN+ G + + L Sbjct: 97 SALGIAALDPDALAVVAKKAMDAKIPVVTFDSNVKGDITSSFIATDNKVAGAMAGEQLAK 156 Query: 143 IV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIM 201 ++ +G ++ +P A AG + L Y D IK++ Q+ DG AL I Sbjct: 157 LINGKGKVAIVSHNPGTTTAIEREAGFREALAKYPD---IKILNTQFSDGD-KSKALAIT 212 Query: 202 ENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDA--DLA 249 + + AN + I + +N+ + G + + +GL+GKV + G D+ DLA Sbjct: 213 LDIINANPD-IAGIYGTNEPSIFGIAKGVEEKGLTGKVVLVGIDSSEDLA 261 >UniRef50_A6L0Y3 Sensor protein n=17 Tax=Bacteroides RepID=A6L0Y3_BACV8 Length = 908 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 75/304 (24%), Positives = 135/304 (44%), Gaps = 13/304 (4%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFV 60 MK + L LC +LT+ + IG++ R + + +I + G +V + Sbjct: 1 MKKHLLFLILCLMGILTSCSQKHTRYYIGVSQCSDDEWRHKMNHEIVREALFYDGVEVEI 60 Query: 61 QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD 120 ++A N Q+ I I+R VD+L++ P ++ VV++A GI V+ DR I Sbjct: 61 RTAKDNSRNQIEDINYFIDRKVDLLIVAPNEAAAVTPVVEKAYGLGIPVVVIDRKILSDR 120 Query: 121 IDFYISFDNEKVGELQAKALVDIVP-QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSG 179 ++ DN ++G+ + +V+ + +G + G A G LK + G Sbjct: 121 YTAFVGADNCEIGKDVGQYIVNRLGGKGKILEITGLEGSTPAMERHRGLADALK--AEPG 178 Query: 180 KIKVVGDQWVDG-WLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGK 238 I++ VDG WL A + M++ L +N I+ V A ND A GA + + L + Sbjct: 179 -IEITAS--VDGAWLQSVAGEKMDSIL-QDNKGINLVFAQNDRMAVGAYLSARQRQLEKE 234 Query: 239 VAISGQDA---DLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNN 295 + G DA G++++ G T P + ++A+++ + + DT L+ Sbjct: 235 MLFVGIDALPGKGYGVEQVLEGVLDATFIYPTG--GDKVMQVAMDILEKRPYERDTKLST 292 Query: 296 GLKD 299 L D Sbjct: 293 ALVD 296 >UniRef50_C5EMU2 Twin-arginine translocation pathway signal n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EMU2_9FIRM Length = 369 Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 77/314 (24%), Positives = 139/314 (44%), Gaps = 32/314 (10%) Query: 25 EVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVD- 83 + + + I + E W ++ + A S G V + + ++ Q+ I++ I + D Sbjct: 51 DYHLAICIHSMDNEYWAQEAEGAKLAAASYGVSADVLTCDSDDNKQLQGIKDYIAQYGDK 110 Query: 84 -VLVIIPYNGQVLSNVVKEAKQEG--IKVLAY--DRMINDADIDFYISF--DNEKVGELQ 136 V V+ P + +N+ + ++ G + +LA+ D + F S D+ +G+ Sbjct: 111 AVFVVDPSSTANTANIAELCEESGNYVAILAHRADGLYPKDYPHFVASLMLDDIAIGKAT 170 Query: 137 AKALVDIVP--------QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQW 188 AKAL + + QG L+G N K F + LK Y + I+VV D Sbjct: 171 AKALFESIGGEGQVAELQG---LLGDDSATNRHKAFE----EALKDYPN---IEVV-DSQ 219 Query: 189 VDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADL 248 W A+ + EN L + + V ++ND A GA++AL +GL+GK+ +SG D Sbjct: 220 TASWSQSEAMTLTENWLVKYPD-LKGVYSANDTMALGAVEALKNKGLNGKIMVSGCDGIE 278 Query: 249 AGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQ-EPKADTTLNNGLKDVPSRLLTP 307 A + + G +T ++A A A++ G+ +P TT+ + + + + Sbjct: 279 AALNAVNDGDMVITNANNGYMIAGYGASYAIQAALGKLDP---TTIPDNERLIFCKTTLV 335 Query: 308 IDVNKNNIKDTVIK 321 N N+I D IK Sbjct: 336 TKDNANDIIDKFIK 349 >UniRef50_Q896U1 D-ribose-binding periplasmic protein n=1 Tax=Clostridium tetani RepID=Q896U1_CLOTE Length = 324 Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 56/197 (28%), Positives = 95/197 (48%), Gaps = 14/197 (7%) Query: 74 IENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVG 133 +E+ IN+ VD +V+ + + L V+ A I ++ D ++ + +I+ DNEK Sbjct: 84 VEDAINQKVDGIVLAASDTKALIQPVENAINAKIPLVTVDSGVDSDKVASFIATDNEKAA 143 Query: 134 ELQAKALVDIVPQGNY-----FLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQW 188 A +++ + F+ G S K FR G K SG I+++ Q+ Sbjct: 144 SQAADVCAELIGKSGKVGVVNFVPGVSTAVQREKGFRDGMSK------HSG-IELLKTQY 196 Query: 189 VDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADL 248 A+ I E+ LTAN + + A+ A+N+ +A G QAL +G++GKV + DAD Sbjct: 197 SQSD-KSKAMAITEDILTANPD-VKAIFAANNRSALGVAQALKGKGVAGKVKVVAFDADP 254 Query: 249 AGIKRIAAGTQTMTVYK 265 IK I G+ T + + Sbjct: 255 DEIKGIEDGSITALIVQ 271 >UniRef50_C9PVL5 Sensor protein n=1 Tax=Prevotella sp. oral taxon 472 str. F0295 RepID=C9PVL5_9BACT Length = 858 Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 73/257 (28%), Positives = 109/257 (42%), Gaps = 32/257 (12%) Query: 57 KVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI 116 +V SA N Q++QIE I++G D++++ P + L+ V+ +A G++V+ DR Sbjct: 16 RVEFASAKDNNRVQIAQIERFIDKGADLIIVSPNEAKALTPVINKAFDRGVRVVLVDRKS 75 Query: 117 NDADIDFYISFDNEKVG---------ELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAG 167 +I DN +G L K V + QG L G SP FR Sbjct: 76 ASDKYTAFIGADNVAIGRAVGRFVGEHLGGKGRV-MELQG---LRGSSPAIERDSGFR-- 129 Query: 168 QMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENA--LTANNNKIDAVVASNDATAGG 225 + L Y +IKVV + D W ALK A + + D V A D G Sbjct: 130 --EALAHY---PQIKVVANAHAD-WF---ALKAETEATRMFKTVGEADLVFAQCDRMGIG 180 Query: 226 AIQALSAQGLSGKVAISGQDADLA---GIKRIAAGTQTMTVYKPITLLANTAAEIAVELG 282 A QA G+ G V I G DA GI+ + GT T P + ++A+ + Sbjct: 181 AHQATQKLGIKG-VKIVGVDALPTPGDGIEAVKNGTFLATFVYPTH--GDEVLKLAMNIL 237 Query: 283 NGQEPKADTTLNNGLKD 299 G+ + +T L G+ D Sbjct: 238 EGRPFRRETILQTGVID 254 >UniRef50_C8S5N2 Monosaccharide-transporting ATPase n=1 Tax=Rhodobacter sp. SW2 RepID=C8S5N2_9RHOB Length = 349 Score = 57.4 bits (137), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 80/311 (25%), Positives = 130/311 (41%), Gaps = 37/311 (11%) Query: 23 AKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSAN--GNEETQMSQIENMINR 80 A K+G L E W+ + + A LG + Q+A G++ Q++ EN+I++ Sbjct: 54 AAGTKVGGVSKTLTNEYWRSLGEGYANVATKLGIEFVYQAAQSEGDQLGQLAIAENLISQ 113 Query: 81 GVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKAL 140 G + L+ P L V+ A G+ VL +NDA I ++ VG +Q Sbjct: 114 GFNALLFSPQTDANLIPAVEAATAAGVPVL----NVNDAVIPSAANY----VGNVQKGNG 165 Query: 141 VDIVPQGNYFLM----GG--SPVDNNAKLFRAGQMK--VLKPYVDSGKIKVVGDQWVDGW 192 V++ N+F+ GG + ++ ++ AGQ + GK +VV + W Sbjct: 166 VNVA---NWFIANRPDGGKVAVIEGQPGVYAAGQRTAGFTETITAGGKFEVVASVPAN-W 221 Query: 193 LPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIK 252 E A L + I A+ND A G ++A+ A G + +VA+ G D Sbjct: 222 SREEAFNAASTILQQYPDLI-GFYANNDGMALGVVEAVKAAGKAEQVAVFGTDGISDAYA 280 Query: 253 RIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPID-VN 311 + AG T TV L A E+A+ L GQ D+P + TP + Sbjct: 281 AVRAGDLTGTVDSFPVLTGEIAMEVALRLMAGQ-------------DLPRVVATPQALIT 327 Query: 312 KNNIKDTVIKD 322 K+N++ D Sbjct: 328 KDNVETYATSD 338 >UniRef50_A9HPK6 D-ribose-binding periplasmic protein n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=A9HPK6_GLUDA Length = 336 Score = 57.4 bits (137), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 76/304 (25%), Positives = 131/304 (43%), Gaps = 36/304 (11%) Query: 5 NILLTLCTSLLLTNVAA----HAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKV-- 58 N+ LC + +L A HA + I + + WQ R K A AKV Sbjct: 22 NMRRLLCAATMLCAAVAVGQAHAADRGIAVIVKTANSNYWQNVR----KGAADAVAKVEN 77 Query: 59 FVQSANGNEET-----QMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYD 113 + + G Q++ + + + + V +V+ P + L +++A + I V+ D Sbjct: 78 YTMTFQGPTSESAVADQVNMVADAVTQKVAAIVLAPSDPDALVPSIRKAWEAHIPVVLID 137 Query: 114 RMINDADIDFYISF---DNEKVGELQAKALVDIVPQ-GNYFLMGGSPVDNNAKLFRAGQM 169 MI+D+ +Y SF DNE GE K +VD V Q G +M P +++ R G Sbjct: 138 SMISDSGAKYYQSFLATDNEAAGEALGKEMVDHVGQTGKVAIMSYVP-GVGSEIGRVGGF 196 Query: 170 KVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALT---ANNNKIDAVVASNDATAGGA 226 + K + I++VG + ++ + + N T A+N + + A+N+ TA G Sbjct: 197 R--KYIAEHSHIQIVGP-----FYSQSQMALAMNQTTDVLASNPDLKGIFAANEMTAVGV 249 Query: 227 IQALSAQGLSGK---VAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGN 283 +A+ G SGK +A G + D G R +GT + + + E A+ + Sbjct: 250 GRAIQQAGKSGKLYAIAFDGNE-DEQGFVR--SGTFQLLAVQGSYAMGAKGVETAIGVLT 306 Query: 284 GQEP 287 G +P Sbjct: 307 GAKP 310 >UniRef50_B0P8T4 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8T4_9FIRM Length = 333 Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 14/230 (6%) Query: 37 LERWQKDRDIFV-------KKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIP 89 W + + +V + A++ G K+ Q NG+ Q Q+E+ I +GVD +V+ P Sbjct: 64 FSNWSRSFEFYVDLEKGMQEVADAQGVKLITQDPNGDLAAQTKQVEDFITQGVDGIVLCP 123 Query: 90 YNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVPQGNY 149 + + Q GI ++ D + D+ +I+ DN G+L A+ + + + Sbjct: 124 IDSNAAVTEAETINQAGIPLVTTDIAVAGGDVASHIASDNTLGGQLAAQFIGEQLGGTGK 183 Query: 150 FLMGGSPVDNNAKLFRAGQMKVL-KPYVDSGKIKVVGDQWVDGWLPENALKIMENALTAN 208 + +P + G + + Y D I++V Q + E L +MEN L +N Sbjct: 184 VALINNPTITSLIERETGFTDTMAQKYPD---IEIVAVQSGESKR-EKGLSVMENILQSN 239 Query: 209 NNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGT 258 + + V A ND GA+QA+ A + I G DA +K I G+ Sbjct: 240 PD-VQGVFAVNDMMGLGALQAVQA-AQRDDIVIVGFDATEEAVKYIKEGS 287 >UniRef50_C0C2H6 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2H6_9CLOT Length = 342 Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 64/271 (23%), Positives = 121/271 (44%), Gaps = 25/271 (9%) Query: 26 VKIGMAIDDLRLERWQKDRDIFVKK-AESLGAKVFVQSANGNEETQMSQIENMINRGVDV 84 +KIG + +++Q +++ K+ +S G ++ V A + TQ+SQ+ + +N G D+ Sbjct: 51 LKIGFCV--TNRDQFQTEQEGIAKELCDSKGIELSVADAKEDISTQISQVSSFVNAGCDL 108 Query: 85 LVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADI----DFYISFDNEKVGELQAKAL 140 L+I + + + ++ A + + ++RM +D + +Y+ + G K + Sbjct: 109 LMINCVDAESIQEIINAAGD--VPCVFFNRMPSDHSVFDENHYYVGMSDYDCGYDMGKFM 166 Query: 141 VDIVPQGN-------YFLMGGSPVDNNAKLFRAGQMKVLKPYVDSG-KIKVVGDQWVDGW 192 + + N +G P+ + R +K K DSG K+ V + + W Sbjct: 167 AEWLKDNNKTDTADGVLFLG--PLGATNTVSRTDGIK--KGLADSGYKVNWVFEDTAE-W 221 Query: 193 LPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSG--KVAISGQDADLAG 250 A+ + + K D + A+ND A G I+AL+A G S I+G DA G Sbjct: 222 DRSKAMDKFTQFM-GSGKKFDFIAANNDDMALGCIEALTAAGYSAPFDFPIAGIDATENG 280 Query: 251 IKRIAAGTQTMTVYKPITLLANTAAEIAVEL 281 + + GT T T + + + N EIA + Sbjct: 281 LLAVGDGTLTATFDQSPSKMTNYCFEIAFAI 311 >UniRef50_C7M5H3 Sensor protein n=1 Tax=Capnocytophaga ochracea DSM 7271 RepID=C7M5H3_CAPOD Length = 934 Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 68/302 (22%), Positives = 133/302 (44%), Gaps = 15/302 (4%) Query: 4 KNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESL---GAKVFV 60 K +L L +L + + + + + W++ + +K+ +L ++ + Sbjct: 14 KYHILFLYFALFACLACQRERNPRYVIGVSQCSEDLWRQTMNEELKREVALYQANTELLI 73 Query: 61 QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD 120 +S + Q++ IE I + VDVLV+ P + + V+++A Q+GI V+ DR I Sbjct: 74 RSVKDDTPKQIADIEWFIEQKVDVLVVSPNESEACTPVIEKAYQQGIPVILVDRKIATES 133 Query: 121 IDFYISFDNEKVGELQAKALVDIVP-QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSG 179 Y+ +N ++G+ + I+ +GN + G+ + G + L ++ Sbjct: 134 YTAYVGANNYQIGKEAGHYAIGILKGKGNIAEVRGTKGSTSDAERHKGFVDALN---NAP 190 Query: 180 KIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKV 239 ++++V + W +L +A K+ L + ID V A ND A G +A A +GK+ Sbjct: 191 EVRIVAETW-GNFLKADA-KVQMQQLFQQHPNIDLVFAMNDPMAAGTHEA--AMQFNGKI 246 Query: 240 A-ISGQDA-DLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGL 297 I G DA GI I Q + P ++A+++ + Q + + LN + Sbjct: 247 PFIIGVDALQQEGISNIENNVQDASFIYPTG--GEKVIDLAMKILHKQPFERENILNTAV 304 Query: 298 KD 299 D Sbjct: 305 VD 306 >UniRef50_C9Y9X5 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y9X5_9BURK Length = 318 Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 68/268 (25%), Positives = 118/268 (44%), Gaps = 16/268 (5%) Query: 49 KKAESLGAKVFVQSA--NGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEG 106 KKA F++ A G Q++ +E+MI R V+ + I P + ++ + +A G Sbjct: 49 KKAGQKAGVKFIELAAEKGELSKQLAIVEDMITRKVNAIAIAPVDSAGIAPAINKALAAG 108 Query: 107 IKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVPQGNYFL-MGGSPVDNNAKLFR 165 IKV+A D I+ A I Y++ DN K +Q + + G+ + + G + + + Sbjct: 109 IKVVAVDTGISGAKITSYVATDNIKAAMVQGDWTAEQIKDGDTVIYVTGDQGQSTGQERK 168 Query: 166 AGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGG 225 G + L + K+ V W D + +N + E AL AN + + D A G Sbjct: 169 KGFLDGLNAKRKNVKVVEVATTW-DQTMAQNGV---ETALRANPTA-KVIACAWDGGALG 223 Query: 226 AIQALSAQG-LSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNG 284 A AL A G +G V I+G D G+ + G Q+ + + + E A+ G Sbjct: 224 AKAALMAAGKKAGDVKIAGFDGSPGGLDMMKQGWQSANAAQMLAKIGQVGVETAIAAAEG 283 Query: 285 QEPKADTTLNNGLKDVPSRLLTPIDVNK 312 ++ +A D S L+ P +V++ Sbjct: 284 KKVEARI-------DTGSFLVLPSNVDQ 304 >UniRef50_C0CHG6 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CHG6_9FIRM Length = 331 Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 50/213 (23%), Positives = 94/213 (44%), Gaps = 6/213 (2%) Query: 27 KIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLV 86 K G + +Q RD KA+ LG + V A + ++++++ +G + + Sbjct: 53 KCGFVVGSFEHVFYQTIRDGIESKAKELGMEAIVTDAELDPNIATNKVQDLTAQGCEAIA 112 Query: 87 IIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVPQ 146 + + + ++ A EG+ + +D + I+ ++ DN K G+L + L+ Sbjct: 113 LSCNDAAGVKPAIENADAEGVAMFTFDCSTDSEAINCFVGTDNYKGGQLGGQELLKYSED 172 Query: 147 GNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALT 206 G+ + P ++ + G + VLK D + V + + A +IMEN LT Sbjct: 173 GDTVGIICYPTASSCLDRQNGALDVLK---DEDRTVVYDNDYQGD--ANKAQEIMENMLT 227 Query: 207 ANNNKIDAVVASNDATAGGAIQALSAQGLSGKV 239 AN + + AV D A GA+ A+ A G K+ Sbjct: 228 ANPD-MAAVFCVGDPAATGALAAIKAAGSDCKI 259 >UniRef50_C0C5Z0 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C5Z0_9CLOT Length = 322 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 41/145 (28%), Positives = 71/145 (48%), Gaps = 15/145 (10%) Query: 2 KIKNILLTLCTSLLLTNVA---------AH----AKEVKIGMAIDDLRLERWQKDRDIFV 48 KI + +C S L + AH AK +KIG+ + D+ + + D Sbjct: 4 KITRVCFVICLSCFLAACSFAGSLGEDTAHKEKTAKGMKIGVCMSDMTHTTFIEMLDQMH 63 Query: 49 KKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIK 108 +KA+ LG ++ S++ + + +EN I G D ++ ++ VV EA ++GI Sbjct: 64 RKADKLGVEIIEFSSDSDPGNMVEGLENFIAAGCDAIIFQNFDQDASEYVVSEAVKKGII 123 Query: 109 VLAYDRMINDADIDFYISFDNEKVG 133 V++YD +DA Y++ DNEK+G Sbjct: 124 VISYDNY-SDAATYVYVA-DNEKLG 146 >UniRef50_A7NNR8 Anti-sigma-factor antagonist n=2 Tax=Roseiflexus RepID=A7NNR8_ROSCS Length = 445 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 64/264 (24%), Positives = 115/264 (43%), Gaps = 19/264 (7%) Query: 26 VKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVL 85 + +G ++D R W R +A G V Q A E Q+ + +++ R V L Sbjct: 5 ITLGCVLNDARFTFWSILRHGVRARAADHGVTVIDQDAR-TVEAQVEMVADLLRRRVHAL 63 Query: 86 VIIP-YNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNE----KVGELQAKAL 140 ++ P + + ++ A+ + V+ D I + + + D ++ EL L Sbjct: 64 ILGPARETRAFAQHLELARLARVPVIEVDGGILEGYVSATVRSDERQGLMRIAELLTARL 123 Query: 141 VDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKI 200 + Q L+ G P ++ A + L+ + +I+++ Q V W E+ + Sbjct: 124 GE---QLCIALIAG-PHNHRADIL----ADALRQW---PRIRIMA-QAVGDWTRESGRNL 171 Query: 201 MENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQT 260 E L A IDA+ A+ND A GA+ AL AQ L+GKV + G D ++ I +G Sbjct: 172 TEEWLRAGQ-PIDAIFAANDPMALGAVDALKAQNLAGKVVVVGFDGLPEALRAIHSGHML 230 Query: 261 MTVYKPITLLANTAAEIAVELGNG 284 TV + + A ++A++ G Sbjct: 231 ATVNQEPLRIGRQAVDVALQALRG 254 >UniRef50_A6LC26 Sensor protein n=6 Tax=Bacteroidales RepID=A6LC26_PARD8 Length = 911 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 71/271 (26%), Positives = 120/271 (44%), Gaps = 23/271 (8%) Query: 40 WQKD--RDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSN 97 W++ RD+ V+ ++ V A+ + +TQ+SQI+ I + VD+L+I + ++ Sbjct: 42 WRQSMIRDMEVEALNHPEIELVVMDASQDNDTQISQIKGFIKKKVDLLIISSNETEPVTP 101 Query: 98 VVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVPQGNYFL-MGGSP 156 V EA + GI + DR IN + YI DN ++G + ++ L + G Sbjct: 102 VAVEAYRAGIPTIILDRKINSDEYTTYIGADNYEIGRSIGMYISSLIKGETTILEIWGRR 161 Query: 157 VDNNAKLFRAGQMKVLKPYVDSGKIKV-VGDQWVDG-WLPENALKIMENALTANN-NKID 213 ++A G +VD+ I V + +DG W ENA E L ++ +D Sbjct: 162 GSSSATERHQG-------FVDAMSIDPNVKIRELDGYWYKENA---YEEVLKLDSIEDVD 211 Query: 214 AVVASNDATAGGAIQALSAQ--GLSGKVAISGQD---ADLAGIKRIAAGTQTMTVYKPIT 268 V A ND A GA +A+ + L G V G D G++ +A G + Y P Sbjct: 212 IVFAHNDMMALGAREAIEERDSSLVGHVEFIGVDGLLGGGLGVEAVAQGKLDASFYYPTG 271 Query: 269 LLANTAAEIAVELGNGQEPKADTTLNNGLKD 299 A ++A ++ +GQ L+ + D Sbjct: 272 --GGVAIKVAWQILSGQAYTKKYALSTAMID 300 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_C9Y333 D-xylose-binding periplasmic protein n=20 Tax=Pr... 395 e-108 UniRef50_P45047 D-xylose-binding periplasmic protein n=193 Tax=B... 369 e-101 UniRef50_Q2RGX1 Periplasmic binding protein/LacI transcriptional... 358 2e-97 UniRef50_B5JEL4 Putative uncharacterized protein n=1 Tax=Verruco... 322 1e-86 UniRef50_C6J071 ABC-type ribose transport system n=7 Tax=Bacteri... 319 1e-85 UniRef50_A6TRZ6 Monosaccharide-transporting ATPase n=1 Tax=Alkal... 318 2e-85 UniRef50_B9MLQ1 Monosaccharide-transporting ATPase n=1 Tax=Anaer... 306 9e-82 UniRef50_B0K235 Monosaccharide-transporting ATPase n=9 Tax=Clost... 302 2e-80 UniRef50_B8I3W5 Periplasmic sugar-binding protein n=2 Tax=Clostr... 300 4e-80 UniRef50_C8WRB6 Xylose binding protein transport system n=2 Tax=... 286 6e-76 UniRef50_A4XMF2 Monosaccharide-transporting ATPase n=1 Tax=Caldi... 276 8e-73 UniRef50_A4AIX2 Solute-binding protein n=1 Tax=marine actinobact... 267 4e-70 UniRef50_A5ZMP8 Putative uncharacterized protein n=1 Tax=Ruminoc... 266 1e-69 UniRef50_A0QT42 ABC transporter n=2 Tax=Actinomycetales RepID=A0... 265 1e-69 UniRef50_B1G9I5 Monosaccharide-transporting ATPase n=2 Tax=Burkh... 265 2e-69 UniRef50_Q11DN9 D-xylose ABC transporter, periplasmic substrate-... 265 2e-69 UniRef50_A9KQP6 Putative solute-binding component of ABC transpo... 263 8e-69 UniRef50_D1PSG1 Sugar ABC transporter, periplasmic sugar-binding... 262 2e-68 UniRef50_C5ESX5 Multiple sugar-binding periplasmic receptor chvE... 261 2e-68 UniRef50_A5FZZ2 Monosaccharide-transporting ATPase n=1 Tax=Acidi... 260 7e-68 UniRef50_P25548 Multiple sugar-binding periplasmic receptor chvE... 259 7e-68 UniRef50_Q2NWM4 Putative xylose ABC transporter periplasmic comp... 259 1e-67 UniRef50_A9KQP5 Periplasmic binding protein/LacI transcriptional... 253 6e-66 UniRef50_D2Q8V2 ABC transporter (Substrate-binding protein) n=2 ... 253 7e-66 UniRef50_C2AIY5 Monosaccharide ABC transporter substrate-binding... 249 7e-65 UniRef50_C7REM6 Periplasmic binding protein/LacI transcriptional... 249 8e-65 UniRef50_C1RNE3 Monosaccharide ABC transporter substrate-binding... 248 2e-64 UniRef50_D2Q1K0 Xylose ABC transporter, substrate-binding protei... 248 2e-64 UniRef50_C7MA39 Monosaccharide-binding protein n=1 Tax=Brachybac... 247 3e-64 UniRef50_UPI0001C31C00 xylose binding protein transport system n... 247 5e-64 UniRef50_Q65E53 RbsB n=6 Tax=Firmicutes RepID=Q65E53_BACLD 246 8e-64 UniRef50_C0C295 Putative uncharacterized protein n=1 Tax=Clostri... 245 1e-63 UniRef50_D0LRU4 D-xylose transporter subunit XylF n=1 Tax=Halian... 245 2e-63 UniRef50_D1C9K0 ABC-type xylose transport system periplasmic com... 245 2e-63 UniRef50_UPI0001BC53E3 D-xylose ABC transporter, periplasmic sub... 245 2e-63 UniRef50_C3QNV9 Sensor protein n=5 Tax=Bacteroides RepID=C3QNV9_... 244 3e-63 UniRef50_B1VWK1 Putative ABC transporter solute-binding protein ... 244 5e-63 UniRef50_C6PMK5 ABC transporter (Substrate-binding protein) n=6 ... 242 9e-63 UniRef50_Q47NL4 Solute-binding protein n=26 Tax=Actinomycetales ... 242 2e-62 UniRef50_D1BVH2 Xylose ABC transporter, substrate-binding protei... 241 2e-62 UniRef50_A9B1C5 Solute-binding protein n=1 Tax=Herpetosiphon aur... 241 3e-62 UniRef50_C7Q046 Solute-binding protein n=4 Tax=Actinomycetales R... 240 3e-62 UniRef50_P36949 D-ribose-binding protein n=274 Tax=Bacteria RepI... 240 3e-62 UniRef50_C7MZ66 Monosaccharide-binding protein n=1 Tax=Saccharom... 240 5e-62 UniRef50_D2B5R3 Putative sugar ABC transporter, substrate-bindin... 239 8e-62 UniRef50_B0PDL3 Putative uncharacterized protein n=1 Tax=Anaerot... 239 1e-61 UniRef50_C8WRM5 Periplasmic binding protein/LacI transcriptional... 237 3e-61 UniRef50_C6QL47 Periplasmic binding protein/LacI transcriptional... 237 4e-61 UniRef50_D1AGX3 Periplasmic binding protein/LacI transcriptional... 237 5e-61 UniRef50_A8S312 Putative uncharacterized protein n=1 Tax=Clostri... 236 7e-61 UniRef50_D1BCK3 Multiple monosaccharide-binding protein n=1 Tax=... 236 8e-61 UniRef50_D2QJX6 Periplasmic binding protein/LacI transcriptional... 236 9e-61 UniRef50_A6L0Y3 Sensor protein n=17 Tax=Bacteroides RepID=A6L0Y3... 235 1e-60 UniRef50_A6X2R7 Periplasmic binding protein/LacI transcriptional... 235 2e-60 UniRef50_Q03CA2 ABC-type sugar transport system, periplasmic com... 233 7e-60 UniRef50_C1D8A9 RbsB n=14 Tax=Bacteria RepID=C1D8A9_LARHH 233 8e-60 UniRef50_C5VU40 D-ribose-binding protein n=4 Tax=Bacteria RepID=... 232 1e-59 UniRef50_Q97JD5 Periplasmic sugar-binding protein n=1 Tax=Clostr... 232 2e-59 UniRef50_Q48J93 Sugar ABC transporter, periplasmic sugar-binding... 230 4e-59 UniRef50_C5EHH7 Periplasmic binding protein/LacI transcriptional... 230 5e-59 UniRef50_Q98LI2 Periplasmic ribose-binding protein n=2 Tax=Prote... 230 5e-59 UniRef50_C3X7Z9 D-xylose ABC transporter n=1 Tax=Oxalobacter for... 228 2e-58 UniRef50_C6W799 Monosaccharide-transporting ATPase n=1 Tax=Dyado... 228 2e-58 UniRef50_Q2SMT1 ABC-type sugar transport system, periplasmic com... 228 2e-58 UniRef50_A8GD74 Periplasmic binding protein/LacI transcriptional... 227 4e-58 UniRef50_A5F1B8 Ribose ABC transporter, periplasmic D-ribose-bin... 226 9e-58 UniRef50_B8I2K0 Periplasmic binding protein/LacI transcriptional... 225 2e-57 UniRef50_C0CY30 Putative uncharacterized protein n=1 Tax=Clostri... 224 3e-57 UniRef50_C5VG88 Sensor protein n=2 Tax=Prevotella RepID=C5VG88_9... 224 3e-57 UniRef50_C7M0I9 Solute-binding protein n=1 Tax=Acidimicrobium fe... 224 4e-57 UniRef50_C7M5H3 Sensor protein n=1 Tax=Capnocytophaga ochracea D... 223 6e-57 UniRef50_UPI000185D1D6 putative DNA-binding response regulator/s... 223 7e-57 UniRef50_B8HEQ4 Multiple sugar-binding periplasmic receptor n=8 ... 222 1e-56 UniRef50_Q7MEU9 ABC-type sugar transport system, periplasmic com... 222 2e-56 UniRef50_B1KZY7 D-ribose-binding protein n=3 Tax=Clostridium bot... 220 5e-56 UniRef50_B1Y1T3 ABC sugar transporter, periplasmic solute-bindin... 220 7e-56 UniRef50_D2QME7 Two component transcriptional regulator, AraC fa... 219 9e-56 UniRef50_Q9KAG4 Sugar ABC transporter (Sugar-binding protein) n=... 219 9e-56 UniRef50_A8GD77 Periplasmic binding protein/LacI transcriptional... 219 1e-55 UniRef50_A8L0L2 Solute-binding protein n=5 Tax=Bacteria RepID=A8... 219 1e-55 UniRef50_Q0SSJ2 Ribose ABC transporter, ribose-binding protein n... 219 1e-55 UniRef50_B3DR21 ABC-type xylose transport system periplasmic com... 218 3e-55 UniRef50_A0LTZ4 Solute-binding protein n=17 Tax=Actinomycetales ... 218 3e-55 UniRef50_A9CF36 ABC transporter, substrate binding protein (Suga... 218 3e-55 UniRef50_A8GZV8 Monosaccharide-transporting ATPase n=29 Tax=Gamm... 218 3e-55 UniRef50_C1DLC8 ABC transporter substrate binding protein n=3 Ta... 217 5e-55 UniRef50_D2BKS5 Ribose ABC transporter, substrate binding protei... 217 5e-55 UniRef50_Q1Z3C1 Putative sugar ABC transporter, periplasmic suga... 216 1e-54 UniRef50_Q9K631 Rhizopine ABC transporter (Rhizopine-binding pro... 214 4e-54 UniRef50_Q0SK74 ABC sugar transporter, periplasmic solute-bindin... 214 4e-54 UniRef50_B0NEL2 Putative uncharacterized protein n=1 Tax=Clostri... 214 4e-54 UniRef50_Q65S41 RbsB protein n=8 Tax=Pasteurellaceae RepID=Q65S4... 214 4e-54 UniRef50_D1PGX0 Putative DNA-binding response regulator/sensor h... 213 7e-54 UniRef50_Q98J19 Ribose-binding protein of ribose ABC transporter... 213 1e-53 UniRef50_B1B7W7 D-ribose-binding periplasmic protein n=1 Tax=Clo... 212 1e-53 UniRef50_C9Z5F4 Putative lipoprotein n=2 Tax=Streptomyces RepID=... 212 1e-53 UniRef50_B0NBQ1 Putative uncharacterized protein n=1 Tax=Clostri... 212 2e-53 UniRef50_B1G1G9 Monosaccharide-transporting ATPase n=1 Tax=Burkh... 211 3e-53 UniRef50_A6LHB1 Sensor protein n=4 Tax=Bacteroidales RepID=A6LHB... 210 4e-53 UniRef50_A6UHJ3 Periplasmic binding protein/LacI transcriptional... 210 5e-53 UniRef50_D1PGW4 Sensor protein n=1 Tax=Prevotella copri DSM 1820... 210 7e-53 UniRef50_A6E6Q9 Sensor protein n=1 Tax=Pedobacter sp. BAL39 RepI... 210 7e-53 UniRef50_C6CIQ9 Periplasmic binding protein/LacI transcriptional... 209 9e-53 UniRef50_Q7UNV9 Bifunctional carbohydrate binding and transport ... 209 1e-52 UniRef50_D1QRT0 Putative DNA-binding response regulator/sensor h... 209 1e-52 UniRef50_A6WFF0 Solute-binding protein n=1 Tax=Kineococcus radio... 209 1e-52 UniRef50_UPI0001B4C057 putative D-ribose-binding protein compone... 209 1e-52 UniRef50_B2IJW8 Periplasmic binding protein/LacI transcriptional... 209 1e-52 UniRef50_C7QF49 Solute-binding protein n=1 Tax=Catenulispora aci... 208 2e-52 UniRef50_Q2KAX1 Probable sugar ABC transporter, substrate-bindin... 208 2e-52 UniRef50_C1RM32 Monosaccharide ABC transporter substrate-binding... 208 3e-52 UniRef50_C5VEK6 D-ribose-binding periplasmic protein n=3 Tax=Cor... 207 3e-52 UniRef50_B9JL62 Sugar ABC transporter n=7 Tax=Bacteria RepID=B9J... 207 3e-52 UniRef50_Q1R0N3 Periplasmic binding protein/LacI transcriptional... 207 5e-52 UniRef50_A8RW63 Putative uncharacterized protein n=1 Tax=Clostri... 207 6e-52 UniRef50_A9WDY0 Periplasmic sugar-binding protein n=15 Tax=Bacte... 207 6e-52 UniRef50_A0LXA2 Sensor protein n=1 Tax=Gramella forsetii KT0803 ... 206 8e-52 UniRef50_A1R5X6 D-ribose-binding protein n=1 Tax=Arthrobacter au... 205 1e-51 UniRef50_Q2YI92 Putative two-component system sensor histidine k... 205 2e-51 UniRef50_A1WLB7 Periplasmic binding protein/LacI transcriptional... 205 2e-51 UniRef50_A5ZT83 Putative uncharacterized protein n=1 Tax=Ruminoc... 205 2e-51 UniRef50_A5KKL8 Putative uncharacterized protein n=1 Tax=Ruminoc... 205 3e-51 UniRef50_B3T6P5 Putative periplasmic binding protein and sugar b... 204 3e-51 UniRef50_P49308 Putative rhizopine-binding protein n=37 Tax=Prot... 204 3e-51 UniRef50_A4TI53 Sugar ABC transporter periplasmic binding protei... 204 3e-51 UniRef50_C6WNS7 Monosaccharide-transporting ATPase n=1 Tax=Actin... 204 4e-51 UniRef50_B5K0N1 ABC sugar transporter, periplasmic solute-bindin... 204 4e-51 UniRef50_D1ANT2 Periplasmic binding protein/LacI transcriptional... 203 5e-51 UniRef50_Q8RBP9 Periplasmic sugar-binding proteins n=1 Tax=Therm... 203 7e-51 UniRef50_D1AIH6 Galactose-binding protein n=3 Tax=Bacteria RepID... 203 8e-51 UniRef50_A8F472 Periplasmic binding protein/LacI transcriptional... 202 1e-50 UniRef50_A6UE72 Monosaccharide-transporting ATPase n=13 Tax=Alph... 202 1e-50 UniRef50_C8P3T0 D-galactose-binding periplasmic protein n=1 Tax=... 202 1e-50 UniRef50_C5RJ04 D-xylose ABC transporter, periplasmic substrate-... 202 2e-50 UniRef50_C4U114 Ribose-binding protein of ribose ABC transporter... 202 2e-50 UniRef50_B1WQL3 Putative ribose ABC transporter n=1 Tax=Cyanothe... 202 2e-50 UniRef50_B0URJ4 Monosaccharide-transporting ATPase n=6 Tax=Paste... 202 2e-50 UniRef50_Q3MB45 Periplasmic binding protein/LacI transcriptional... 201 3e-50 UniRef50_A1WJI7 Periplasmic binding protein/LacI transcriptional... 200 4e-50 UniRef50_B9JQF4 Sugar-binding transcriptional regulator, LacI fa... 200 6e-50 UniRef50_C3KN00 Periplasmic ribose-binding protein n=1 Tax=Rhizo... 200 6e-50 UniRef50_C5EU51 D-galactose-binding periplasmic protein n=4 Tax=... 200 7e-50 UniRef50_C6VSM5 Sensor protein n=1 Tax=Dyadobacter fermentans DS... 200 7e-50 UniRef50_A1SYD2 Bifunctional carbohydrate binding and transport ... 200 7e-50 UniRef50_A6LC26 Sensor protein n=6 Tax=Bacteroidales RepID=A6LC2... 199 1e-49 UniRef50_B0P8T4 Putative uncharacterized protein n=1 Tax=Anaerot... 199 1e-49 UniRef50_Q28MQ8 Periplasmic binding protein/LacI transcriptional... 198 2e-49 UniRef50_B8H8H8 Periplasmic binding protein/LacI transcriptional... 198 2e-49 UniRef50_C6JDF0 Monosaccharide-transporting ATPase n=1 Tax=Rumin... 198 2e-49 UniRef50_C0B7M6 Putative uncharacterized protein n=1 Tax=Coproco... 198 2e-49 UniRef50_C9LWW5 Sugar ABC transporter, periplasmic sugar-binding... 198 2e-49 UniRef50_B8H228 Inositol ABC transporter, periplasmic inositol-b... 198 2e-49 UniRef50_C6AR66 Periplasmic binding protein/LacI transcriptional... 198 2e-49 UniRef50_Q01TB6 Periplasmic binding protein/LacI transcriptional... 198 3e-49 UniRef50_A8RKK5 Putative uncharacterized protein n=1 Tax=Clostri... 198 3e-49 UniRef50_A4F8A2 Binding protein/LacI transcriptional regulator n... 197 4e-49 UniRef50_A8RZI4 Putative uncharacterized protein n=1 Tax=Clostri... 197 5e-49 UniRef50_C9MXF0 Putative uncharacterized protein n=1 Tax=Leptotr... 197 6e-49 UniRef50_A5ZV14 Putative uncharacterized protein n=1 Tax=Ruminoc... 197 7e-49 UniRef50_B0P6G6 Putative uncharacterized protein n=2 Tax=Bacteri... 196 8e-49 UniRef50_C2KYA7 Possible periplasmic binding protein/LacI transc... 196 9e-49 UniRef50_C3MI97 Putative solute-binding component of ABC transpo... 196 1e-48 UniRef50_C0C0J1 Putative uncharacterized protein n=1 Tax=Clostri... 196 1e-48 UniRef50_B5GKD2 D-ribose ABC transporter permease protein n=1 Ta... 195 1e-48 UniRef50_C8Q2Z4 Sugar ABC transporter, periplasmic sugar-binding... 195 2e-48 UniRef50_A8SGU5 Putative uncharacterized protein n=1 Tax=Faecali... 195 2e-48 UniRef50_D2PNL9 Periplasmic binding protein/LacI transcriptional... 195 2e-48 UniRef50_C7G6I7 D-galactose-binding periplasmic protein n=3 Tax=... 195 3e-48 UniRef50_B8HJG2 Periplasmic binding protein/LacI transcriptional... 194 3e-48 UniRef50_P39265 D-allose-binding periplasmic protein n=33 Tax=Ba... 194 3e-48 UniRef50_B5J4J1 Putative uncharacterized protein n=1 Tax=Octadec... 194 4e-48 UniRef50_Q5L7F9 Sensor protein n=5 Tax=Bacteroides RepID=Q5L7F9_... 193 5e-48 UniRef50_B0URZ9 Monosaccharide-transporting ATPase n=2 Tax=Gamma... 193 6e-48 UniRef50_B2IIE3 Periplasmic binding protein/LacI transcriptional... 193 6e-48 UniRef50_A0JVZ4 Periplasmic binding protein/LacI transcriptional... 193 7e-48 UniRef50_B7CDT0 Putative uncharacterized protein n=1 Tax=Eubacte... 193 8e-48 UniRef50_Q883G4 Ribose ABC transporter, periplasmic ribose-bindi... 193 1e-47 UniRef50_A1TPE5 Periplasmic binding protein/LacI transcriptional... 192 1e-47 UniRef50_A6W806 Periplasmic binding protein/LacI transcriptional... 192 1e-47 UniRef50_B9JQE2 D-ribose-binding periplasmic protein n=1 Tax=Agr... 192 2e-47 UniRef50_C2KUT6 Galactoside ABC superfamily ATP binding cassette... 192 2e-47 UniRef50_A6C460 Ribose ABC transporter (Ribose-binding periplasm... 192 2e-47 UniRef50_A5KK65 Putative uncharacterized protein n=2 Tax=Clostri... 192 2e-47 UniRef50_C6B4I0 Periplasmic binding protein/LacI transcriptional... 192 2e-47 UniRef50_A1WJM2 Periplasmic binding protein/LacI transcriptional... 191 2e-47 UniRef50_C9PVL5 Sensor protein n=1 Tax=Prevotella sp. oral taxon... 191 3e-47 UniRef50_D2S5J9 Periplasmic binding protein/LacI transcriptional... 191 3e-47 UniRef50_C4ZBY5 D-galactose-binding periplasmic protein n=4 Tax=... 191 3e-47 UniRef50_C6PN56 Periplasmic binding protein/LacI transcriptional... 191 4e-47 UniRef50_D1AQM7 Periplasmic binding protein/LacI transcriptional... 190 5e-47 UniRef50_C3KM03 Ribose ABC transporter, ribose-binding protein n... 190 5e-47 UniRef50_C4FY38 Putative uncharacterized protein n=1 Tax=Catonel... 190 5e-47 UniRef50_A9FWH4 LACI-type transcriptional regulator n=1 Tax=Sora... 190 6e-47 UniRef50_B2J7A7 Periplasmic binding protein/LacI transcriptional... 190 7e-47 UniRef50_A6BKA3 Putative uncharacterized protein n=6 Tax=Clostri... 189 1e-46 UniRef50_C7G6J4 Putative galactose ABC transporter, periplasmic ... 189 1e-46 UniRef50_B2ILF2 Periplasmic binding protein/LacI transcriptional... 188 2e-46 UniRef50_A5CYL7 ABC-type sugar transport system, periplasmic com... 188 2e-46 UniRef50_A6M1Q7 D-galactose-binding periplasmic protein n=4 Tax=... 188 3e-46 UniRef50_UPI00005103C7 solute-binding protein n=1 Tax=Brevibacte... 188 3e-46 UniRef50_A4IPB9 D-ribose-binding periplasmic protein n=2 Tax=Geo... 187 4e-46 UniRef50_C4ZH94 ABC-type sugar transport system, periplasmic com... 187 5e-46 UniRef50_Q97J33 Ribose ABC transporter (Ribose-binding periplasm... 187 5e-46 UniRef50_A6VWF2 Periplasmic binding protein/LacI transcriptional... 187 5e-46 UniRef50_B0P063 Putative uncharacterized protein n=1 Tax=Clostri... 187 5e-46 UniRef50_C0EY05 Putative uncharacterized protein n=1 Tax=Eubacte... 187 6e-46 UniRef50_A9HN30 Periplasmic binding protein/LacI transcriptional... 187 7e-46 UniRef50_C5V3A4 Periplasmic binding protein/LacI transcriptional... 186 8e-46 UniRef50_P44883 D-galactose-binding periplasmic protein n=246 Ta... 186 8e-46 UniRef50_A7NMH5 ABC-type sugar transport system periplasmic comp... 186 8e-46 UniRef50_Q0BAE1 Periplasmic binding protein/LacI transcriptional... 186 1e-45 UniRef50_B1ZN56 Periplasmic binding protein/LacI transcriptional... 185 1e-45 UniRef50_C6JG14 Monosaccharide-transporting ATPase n=1 Tax=Rumin... 185 1e-45 UniRef50_C8S5N2 Monosaccharide-transporting ATPase n=1 Tax=Rhodo... 185 2e-45 UniRef50_B0G317 Putative uncharacterized protein n=5 Tax=Clostri... 185 2e-45 UniRef50_A0R773 Sugar ABC transporter substrate-binding protein ... 185 2e-45 UniRef50_Q7NMF9 Periplasmic sugar binding protein of ABC transpo... 185 2e-45 UniRef50_C0CKL2 Putative uncharacterized protein n=2 Tax=Blautia... 185 2e-45 UniRef50_UPI00016C56B8 bifunctional carbohydrate binding and tra... 185 3e-45 UniRef50_B8I0K4 Periplasmic binding protein/LacI transcriptional... 184 3e-45 UniRef50_A0LA89 Periplasmic binding protein/LacI transcriptional... 184 4e-45 UniRef50_C0C2H6 Putative uncharacterized protein n=1 Tax=Clostri... 184 4e-45 UniRef50_B6BMJ9 Periplasmic binding protein/LacI transcriptional... 183 5e-45 UniRef50_D2LSY2 Periplasmic binding protein/LacI transcriptional... 183 6e-45 UniRef50_A6WVL9 Monosaccharide-transporting ATPase n=17 Tax=Prot... 183 6e-45 UniRef50_UPI0001BCF79F D-galactose-binding periplasmic protein p... 183 6e-45 UniRef50_B0PA90 Putative uncharacterized protein n=1 Tax=Anaerot... 183 7e-45 UniRef50_C0CNG0 Putative uncharacterized protein n=1 Tax=Blautia... 183 7e-45 UniRef50_C8VY22 Periplasmic binding protein/LacI transcriptional... 183 1e-44 UniRef50_B0PGZ6 Putative uncharacterized protein n=1 Tax=Anaerot... 182 1e-44 UniRef50_A5ZT86 Putative uncharacterized protein n=1 Tax=Ruminoc... 182 1e-44 UniRef50_A6BDP6 Putative uncharacterized protein n=1 Tax=Dorea l... 182 1e-44 UniRef50_C6CXV0 D-galactose/D-glucose ABC transporter, periplasm... 182 1e-44 UniRef50_B1ZDA2 Periplasmic binding protein/LacI transcriptional... 182 2e-44 Sequences not found previously or not previously below threshold: UniRef50_A7V0S7 Sensor protein n=6 Tax=Bacteroides RepID=A7V0S7_... 208 3e-52 UniRef50_B9KA11 Ribose ABC transporter, periplasmic ribose-bindi... 204 4e-51 UniRef50_B4DBL5 Monosaccharide-transporting ATPase n=1 Tax=Chtho... 200 5e-50 UniRef50_A6VWG6 Periplasmic binding protein/LacI transcriptional... 199 1e-49 UniRef50_B8D164 ABC-type sugar transport system, periplasmic com... 198 2e-49 UniRef50_B9XK02 Periplasmic binding protein/LacI transcriptional... 196 1e-48 UniRef50_D1AQW5 Periplasmic binding protein/LacI transcriptional... 190 6e-47 UniRef50_D2R5M8 Periplasmic binding protein/LacI transcriptional... 190 8e-47 UniRef50_Q4ZU91 Periplasmic binding protein/LacI transcriptional... 189 1e-46 UniRef50_Q2RKU7 Periplasmic binding protein/LacI transcriptional... 187 3e-46 UniRef50_B4CUB2 Periplasmic binding protein/LacI transcriptional... 187 7e-46 UniRef50_C4G5I4 Putative uncharacterized protein n=1 Tax=Abiotro... 186 8e-46 UniRef50_C0VSF4 D-ribose ABC superfamily ATP binding cassette tr... 186 9e-46 UniRef50_C0DAQ0 Putative uncharacterized protein n=1 Tax=Clostri... 184 4e-45 UniRef50_A8RPX4 Putative uncharacterized protein n=1 Tax=Clostri... 182 1e-44 UniRef50_A4TQ38 Sugar ABC transporter, periplasmic protein n=30 ... 182 1e-44 >UniRef50_C9Y333 D-xylose-binding periplasmic protein n=20 Tax=Proteobacteria RepID=C9Y333_CROTZ Length = 343 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 291/330 (88%), Positives = 315/330 (95%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFV 60 MKIK ++LTLC SL+LT+ + AK+VKIGMAIDDLRLERWQKDRDIFV KAESLGAKVFV Sbjct: 14 MKIKQLILTLCASLVLTSFSGIAKDVKIGMAIDDLRLERWQKDRDIFVSKAESLGAKVFV 73 Query: 61 QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD 120 QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVV EAK+EGIKVLAYDRMIN+AD Sbjct: 74 QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVAEAKREGIKVLAYDRMINNAD 133 Query: 121 IDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGK 180 IDFYISFDNEKVGE+QA++LVD VPQGNYFLMGGSPVDNNA+LFR GQMKVLKP+VDSGK Sbjct: 134 IDFYISFDNEKVGEIQAQSLVDKVPQGNYFLMGGSPVDNNARLFRDGQMKVLKPFVDSGK 193 Query: 181 IKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVA 240 IKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGL+GKVA Sbjct: 194 IKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLAGKVA 253 Query: 241 ISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDV 300 ISGQDADLAGIKRI AGTQTMTVYKPIT LANTAAE+AVELGN ++PK+D TLNNGLK+V Sbjct: 254 ISGQDADLAGIKRIMAGTQTMTVYKPITQLANTAAEVAVELGNDKQPKSDATLNNGLKEV 313 Query: 301 PSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 PSRLLTPI V+K+NI+ TVIKDGFHK+S+L Sbjct: 314 PSRLLTPIKVDKSNIESTVIKDGFHKKSDL 343 >UniRef50_P45047 D-xylose-binding periplasmic protein n=193 Tax=Bacteria RepID=XYLF_HAEIN Length = 332 Score = 369 bits (948), Expect = e-101, Method: Composition-based stats. Identities = 247/330 (74%), Positives = 290/330 (87%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFV 60 MKIK+ LLTL +L + + +AH+K++KIG++IDDLRLERWQKDRDIFV KAES+GAKVFV Sbjct: 1 MKIKSALLTLVGALTVFSSSAHSKDLKIGLSIDDLRLERWQKDRDIFVNKAESMGAKVFV 60 Query: 61 QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD 120 QSANG++ Q+SQIENMIN+ +DVLVIIP+NG+VLSNV+ EAK+EGIKVLAYDR+IN+AD Sbjct: 61 QSANGDDSAQISQIENMINKNIDVLVIIPHNGEVLSNVISEAKKEGIKVLAYDRLINNAD 120 Query: 121 IDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGK 180 +DFY+SFDNEKVGELQAK++V + P+GNYFLMGGSPVDNNAKLFR GQMKVL P + SGK Sbjct: 121 LDFYVSFDNEKVGELQAKSIVAVKPEGNYFLMGGSPVDNNAKLFRKGQMKVLDPLIASGK 180 Query: 181 IKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVA 240 IKVVGDQWVD WL E AL+IMENALTAN N +DAVVASNDATAGGAIQALSAQGLSGKVA Sbjct: 181 IKVVGDQWVDSWLAEKALQIMENALTANKNNVDAVVASNDATAGGAIQALSAQGLSGKVA 240 Query: 241 ISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDV 300 ISGQDADLA IKRI G+QTMTVYKPIT LA+ AAEIAVELG ++ +A+ LNNGLK+V Sbjct: 241 ISGQDADLAAIKRIVNGSQTMTVYKPITKLADKAAEIAVELGKNEKIEANAELNNGLKNV 300 Query: 301 PSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 P+ LL PI V+K NI +TVIKDGFH + + Sbjct: 301 PAYLLDPIAVDKRNINETVIKDGFHTKESI 330 >UniRef50_Q2RGX1 Periplasmic binding protein/LacI transcriptional regulator n=21 Tax=Bacteria RepID=Q2RGX1_MOOTA Length = 381 Score = 358 bits (919), Expect = 2e-97, Method: Composition-based stats. Identities = 205/311 (65%), Positives = 252/311 (81%) Query: 18 NVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENM 77 A + ++KIG+++DDLR ERWQ DRD+FV KA+ LGA+V VQSANG++ TQ+SQ EN+ Sbjct: 41 ASAKNGDKIKIGLSMDDLRQERWQHDRDLFVAKAKELGAEVLVQSANGDDATQLSQAENL 100 Query: 78 INRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQA 137 I++G++VLV+IP+NG ++ +V+ A + G+KVLAYDR+I +AD+D YISFDN +VGELQA Sbjct: 101 ISQGINVLVVIPHNGDAMAPIVEAAHKAGVKVLAYDRLIRNADVDLYISFDNVRVGELQA 160 Query: 138 KALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENA 197 + L VP+G YFLMGGSP DNNAKLFR GQM VLKP +D G IKVVGDQWV WLPE A Sbjct: 161 EYLTKKVPKGKYFLMGGSPTDNNAKLFRQGQMNVLKPLIDKGDIKVVGDQWVKDWLPEEA 220 Query: 198 LKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAG 257 +KIMENALT+NNN+IDAVVASND+TAGGAIQAL+AQ L+GKVAISGQDADLA +RI G Sbjct: 221 MKIMENALTSNNNQIDAVVASNDSTAGGAIQALAAQNLAGKVAISGQDADLAACQRIVEG 280 Query: 258 TQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKD 317 TQ+MTVYKPIT LA AAE+AV L G+ A+ +NNG DVPS LLTPI V+K+N+ Sbjct: 281 TQSMTVYKPITTLATRAAEVAVALAKGENIGANNKVNNGKIDVPSVLLTPIMVDKDNMVQ 340 Query: 318 TVIKDGFHKES 328 TVIKDGFHK Sbjct: 341 TVIKDGFHKLE 351 >UniRef50_B5JEL4 Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JEL4_9BACT Length = 359 Score = 322 bits (826), Expect = 1e-86, Method: Composition-based stats. Identities = 154/328 (46%), Positives = 223/328 (67%), Gaps = 3/328 (0%) Query: 6 ILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANG 65 I + + S T+ ++ ++ IG+++D L+ RWQ DRD+F+ +A+ LGA+V V SAN Sbjct: 19 IGIVISRSHTGTDSSSPDHKLLIGLSMDTLQEARWQVDRDVFLARAKELGAEVSVASANS 78 Query: 66 NEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYI 125 ++ TQ+ + +MI+ GVDV+VIIP++GQ +S V++A Q GI V+AYDR I D+D+D YI Sbjct: 79 DDSTQIRDVNSMISAGVDVIVIIPHDGQAMSEGVRQAHQAGIPVIAYDRSIQDSDLDLYI 138 Query: 126 SFDNEKVGELQAKALVDIVP---QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIK 182 +FDN KVGE QA+ L+D +P +G + G+P DNNAK+F+ GQ +L+PY+D G I+ Sbjct: 139 TFDNVKVGEAQAQYLIDHLPSPGKGRIVRIYGAPTDNNAKMFKQGQDNILQPYIDRGDIE 198 Query: 183 VVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAIS 242 V+ + W + W P NA KI A+T N + ++ASND TAGGAIQAL +GL K+ ++ Sbjct: 199 VIHEDWAENWEPANAKKITNAAITNNGSDFHGILASNDGTAGGAIQALKEEGLVSKIIVT 258 Query: 243 GQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPS 302 GQDA++A +RI G+Q MT+YKPI LA+TAAE+AV + GQ A ++NG K VPS Sbjct: 259 GQDAEMAACQRIVDGSQIMTIYKPIKALASTAAELAVSMATGQPIIARGEIDNGFKTVPS 318 Query: 303 RLLTPIDVNKNNIKDTVIKDGFHKESEL 330 L V+K+N+ TVI DGFH E+ Sbjct: 319 IFLPITSVDKSNMMQTVIADGFHSFEEV 346 >UniRef50_C6J071 ABC-type ribose transport system n=7 Tax=Bacteria RepID=C6J071_9BACL Length = 429 Score = 319 bits (817), Expect = 1e-85, Method: Composition-based stats. Identities = 175/314 (55%), Positives = 236/314 (75%), Gaps = 1/314 (0%) Query: 17 TNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIEN 76 ++ IGM++D L+ ERWQKDRD+F K E LG +V V +ANG++ TQ+SQ E Sbjct: 106 AAGGKDDGKIVIGMSMDTLKEERWQKDRDLFTAKVEELGGEVKVLAANGDDATQLSQAEQ 165 Query: 77 MINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQ 136 +I++GVDVLV+I +N + + +V++A +EGIKV+AYDR+I ++D+D+YISFDN +VGELQ Sbjct: 166 LISQGVDVLVVIAHNAEATAPIVEKAHKEGIKVIAYDRLIRNSDVDYYISFDNVRVGELQ 225 Query: 137 AKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPEN 196 A+A+++ P+GN +GG+ DNNA +F+ G M VLKP + G IK+V DQ+ W PE Sbjct: 226 ARAVIEAAPKGNIVYIGGADTDNNAHMFKEGAMNVLKPLEEKGDIKIVYDQFSKDWKPEE 285 Query: 197 ALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAA 256 ALK MENALTANNN I VVA+ND TAGG IQAL+AQG++GK+ +SGQDADLA ++RIA Sbjct: 286 ALKNMENALTANNNDIQGVVAANDGTAGGVIQALNAQGMAGKIPVSGQDADLAAVQRIAE 345 Query: 257 GTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIK 316 GTQ MTVYKPI +A TAAE+AV G+E KAD T+NNG DVPS LL PI +NK+++ Sbjct: 346 GTQLMTVYKPIKSIAITAAEMAVAAAKGEEVKADKTVNNGKIDVPSVLLDPIPLNKDSL- 404 Query: 317 DTVIKDGFHKESEL 330 + VI+DGFHK ++ Sbjct: 405 NVVIEDGFHKLEDV 418 >UniRef50_A6TRZ6 Monosaccharide-transporting ATPase n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TRZ6_ALKMQ Length = 353 Score = 318 bits (815), Expect = 2e-85, Method: Composition-based stats. Identities = 142/352 (40%), Positives = 231/352 (65%), Gaps = 22/352 (6%) Query: 1 MKIKNILLTLCTSL----LLTNVAAH-----------------AKEVKIGMAIDDLRLER 39 MK K IL L + LL ++++G+++ R ER Sbjct: 1 MKSKKILSFLLMMVMVVTLLAGCGGQQETAEETAGEETVVEEPEAKIRVGLSLPTQREER 60 Query: 40 WQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVV 99 W +D++ A +G ++ V+ ++ N + Q++Q+E ++N+G+DVL++ P++ +++V Sbjct: 61 WVRDKERMEAYAAEVGIELIVRVSDANIQEQITQVEALLNQGIDVLILAPHDASAAASLV 120 Query: 100 KEAKQEGIKVLAYDRMINDAD-IDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVD 158 ++A +EG+ V++YDR+I + D +D Y+SFDN KVGELQ K + + VP+G Y +M G+P D Sbjct: 121 EQANREGVPVISYDRLITNTDKLDIYLSFDNVKVGELQGKYITEQVPEGRYIIMSGAPTD 180 Query: 159 NNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVAS 218 NNA LF+ G M ++P +D+GKI+V+ +Q VD W+PENAL+I+E AL+AN+N++DA++A Sbjct: 181 NNATLFKQGAMSYIQPLIDAGKIEVIAEQAVDNWVPENALRIVEAALSANDNQVDAILAP 240 Query: 219 NDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIA 278 ND TAG AIQAL+AQGL+G+V I+GQDA+++ KRI GTQ+MT++K LL A IA Sbjct: 241 NDGTAGAAIQALTAQGLAGQVPITGQDAEVSAAKRIVDGTQSMTIFKDTRLLGEEAINIA 300 Query: 279 VELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 ++L NG+ + ++NG +VPS LL P V +NI++ ++ G+ E++L Sbjct: 301 IKLANGESISTNGEVDNGRFNVPSVLLEPQVVTADNIRELLVGGGYITEADL 352 >UniRef50_B9MLQ1 Monosaccharide-transporting ATPase n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MLQ1_ANATD Length = 362 Score = 306 bits (783), Expect = 9e-82, Method: Composition-based stats. Identities = 133/309 (43%), Positives = 198/309 (64%), Gaps = 1/309 (0%) Query: 22 HAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRG 81 +V+IG A+ L+ ERW KDRDI + KA G +V +AN N+ Q++Q++ ++++ Sbjct: 51 KPSKVRIGFAMGTLKEERWFKDRDILIAKAHEKGYEVEWVNANENDVEQINQVKYLLSKN 110 Query: 82 VDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALV 141 +++L+I+P N + S+ V AK++GIKV++YDR++ ++DID Y+SF+N KVGEL AK L+ Sbjct: 111 INILIIVPNNYEKCSSAVNLAKKKGIKVISYDRLVKNSDIDVYVSFNNYKVGELMAKWLL 170 Query: 142 DIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIM 201 VP GNY + G P D N ++ + G KVL + +I + +++ W E A + Sbjct: 171 KKVPYGNYVFLLGDPGDYNVQMIKEGYHKVLDSLIQKKQINSLLEKYCYNWRKEYAYNYV 230 Query: 202 ENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTM 261 N L +IDAV+ASND+ A GAI ALS + L+G V ++GQDAD++ +RI GTQ M Sbjct: 231 NNLL-EEGKRIDAVLASNDSLAEGAIMALSEKRLAGSVPVTGQDADISACQRIVKGTQLM 289 Query: 262 TVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTVIK 321 TVYKPI L + +I L G+ K + T+NNG K+VP+ + PI V+K NI DTVIK Sbjct: 290 TVYKPIDKLVDLTLDIVDRLIKGKLLKPNYTINNGYKNVPTFFIDPIGVDKTNINDTVIK 349 Query: 322 DGFHKESEL 330 D FH E+ Sbjct: 350 DNFHTWDEV 358 >UniRef50_B0K235 Monosaccharide-transporting ATPase n=9 Tax=Clostridia RepID=B0K235_THEPX Length = 360 Score = 302 bits (773), Expect = 2e-80, Method: Composition-based stats. Identities = 141/306 (46%), Positives = 205/306 (66%), Gaps = 1/306 (0%) Query: 25 EVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDV 84 ++KIG ++ L+ ERW KDRDI + K LGA+V VQ+AN +++ Q+ Q+ ++++ +DV Sbjct: 50 KIKIGFSLGTLKEERWIKDRDIVMAKLRELGAEVLVQNANNDDQDQLKQVRYLLDQKIDV 109 Query: 85 LVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIV 144 L+I+P + + S V A++EG+KV++YDR++ +++D YISFDN KVG+L A+ LV V Sbjct: 110 LIIVPNDLEKASYAVSLAQKEGVKVISYDRLVTKSNVDLYISFDNVKVGKLMAEYLVKRV 169 Query: 145 PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENA 204 P+GNY ++ G+ DNN K+ + G VLKP ++SG IK+V + W W+ E A + Sbjct: 170 PRGNYLIINGATTDNNTKMIKEGYDSVLKPKIESGDIKIVKEDWAPNWMTEYAFNSTDEL 229 Query: 205 LTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVY 264 L KIDAV+A +DA AGG I+ALS L+GKV ++ QDADLA +RI GTQ MTVY Sbjct: 230 LQK-GAKIDAVIAGDDALAGGIIEALSEHRLAGKVLVAAQDADLAACQRIVEGTQAMTVY 288 Query: 265 KPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGF 324 KPI LA A++A++L G++ T+ +G VP +L PI V+K NI DTVIKDGF Sbjct: 289 KPIDKLAEATAKMAMKLARGEKLDIKNTIYDGKYYVPYYVLEPIAVDKTNIDDTVIKDGF 348 Query: 325 HKESEL 330 H E+ Sbjct: 349 HNRDEV 354 >UniRef50_B8I3W5 Periplasmic sugar-binding protein n=2 Tax=Clostridium RepID=B8I3W5_CLOCE Length = 352 Score = 300 bits (769), Expect = 4e-80, Method: Composition-based stats. Identities = 128/335 (38%), Positives = 215/335 (64%), Gaps = 6/335 (1%) Query: 1 MKIKNILLTLCTSLLLTNVAAH-----AKEVKIGMAIDDLRLERWQKDRDIFVKKAESLG 55 +KI +L +L T +LL + ++ IG+++ L+ ERW +D + KA++ G Sbjct: 6 LKIFLLLASLITMVLLAGCSYKNPIDKPDKITIGLSMATLQEERWHRDIEALRAKAQAKG 65 Query: 56 AKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRM 115 A++ ++AN N Q+SQ+++++++ +D+LVI+P + + V+ A+ +GI+V+ YDR+ Sbjct: 66 AEILFRNANNNINDQISQVKSLLSKDIDILVIVPQDAEKSQQAVQLARNKGIRVICYDRL 125 Query: 116 INDADIDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPY 175 I +++ DFY+SFDN +VGE A +V VP+GNY L+ G+ D N+ ++ G +L Y Sbjct: 126 IKNSNTDFYVSFDNIRVGEYMASLMVSKVPKGNYILINGAKTDYNSFMYNKGFKNILGKY 185 Query: 176 VDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGL 235 + G IK+V + W + W PE+A K ++ AL + KIDA++A+ND+ AG AI+ALS + L Sbjct: 186 LYEGSIKIVDEVWANDWKPEDAFKCVDKAL-RDGKKIDAIIAANDSLAGAAIKALSQRRL 244 Query: 236 SGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNN 295 +GKV ++G DAD++G +R+A GTQ +TVYKPI LA A ++ + L N + +N+ Sbjct: 245 AGKVPVAGHDADISGCQRVAEGTQLLTVYKPIDQLAEKAIDVVLGLLNNDYYACNKFIND 304 Query: 296 GLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 G D+P ++ P+ V K+ + DTVI GFHK ++ Sbjct: 305 GESDIPYEMVEPVVVTKDTLVDTVISAGFHKLEDV 339 >UniRef50_C8WRB6 Xylose binding protein transport system n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WRB6_ALIAD Length = 370 Score = 286 bits (733), Expect = 6e-76, Method: Composition-based stats. Identities = 132/329 (40%), Positives = 194/329 (58%), Gaps = 10/329 (3%) Query: 11 CTSLLLTNVAAHAKEVKIGMAID-DLRLERWQ-KDRDIFVKKAESL--GAKVFVQSANGN 66 TS + VKI + RW+ DR F+ + L A++ +A G+ Sbjct: 36 STSTGAASAVNPHPSVKIAFLMPETNTSPRWEYDDRPDFIAAMKKLDPNAQIIYANAQGS 95 Query: 67 EETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYIS 126 E TQ+ Q+E+ I G +LV+ P NG + +V EA + + V++YDR+I +A +D+Y+S Sbjct: 96 EATQLQQVESAITEGAKLLVVAPVNGFAATTIVTEAAKAHVPVISYDRLIQNAKVDYYVS 155 Query: 127 FDNEKVGELQAKALVDIVPQGN-YFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVG 185 F+N +VG+LQ + + +G ++ G+P D NAK F G VL P SGK+K+ Sbjct: 156 FNNVEVGKLQGEYIAQHTKKGGTVVMLDGAPTDPNAKQFAQGAHDVLDPLFKSGKLKLGY 215 Query: 186 DQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQD 245 +Q+ W + AL M+ ALT +N +DAV+A+ND AG AIQAL Q + G + ++GQD Sbjct: 216 EQFTPNWDSQQALTEMQQALTRLHNHVDAVLAANDNLAGAAIQALEQQHIKG-IPVTGQD 274 Query: 246 ADLAGIKRI-AAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKA---DTTLNNGLKDVP 301 A AG+ RI GTQ+MTVYKPI AN AA++A +L G++P A + T+NNG +VP Sbjct: 275 ATDAGLHRIYYEGTQSMTVYKPIKEEANAAAQLAYDLITGKKPPASLVNGTVNNGATNVP 334 Query: 302 SRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 S LL PI V K+N+ TVIKDGF + + Sbjct: 335 SVLLQPIVVTKSNVASTVIKDGFTTWARI 363 >UniRef50_A4XMF2 Monosaccharide-transporting ATPase n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XMF2_CALS8 Length = 339 Score = 276 bits (706), Expect = 8e-73, Method: Composition-based stats. Identities = 121/285 (42%), Positives = 181/285 (63%), Gaps = 1/285 (0%) Query: 22 HAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRG 81 +V IG A+ L+ ERW KDRDI + KA G +V +AN N+ Q++Q++ ++++ Sbjct: 53 KPSKVVIGFAMGTLKEERWFKDRDILIAKAHEKGYEVEWVNANENDVEQINQVKFLLSKN 112 Query: 82 VDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALV 141 +++L+I+P N + S+ V AK+ GIKV++YDR++ ++DID Y+SF+N KVGEL AK L+ Sbjct: 113 INILIIVPNNYEKCSSAVNLAKKRGIKVISYDRLVRNSDIDVYVSFNNYKVGELMAKWLI 172 Query: 142 DIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIM 201 VP+GNY + G P D N ++ + G KVL P++ +I + +++ W E A + Sbjct: 173 KKVPRGNYAFLLGDPGDYNVQMIKEGYHKVLDPFIKKKQINIALEKYCYNWRKEYAYNYI 232 Query: 202 ENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTM 261 N L N +IDA++ASND+ A GAI ALS + L+G V ++GQDAD++ +RI GTQ M Sbjct: 233 TNLLDQ-NKRIDAILASNDSLAEGAIMALSEKRLAGIVPVTGQDADISACQRIIKGTQLM 291 Query: 262 TVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLT 306 TVYKPI L + EI L N + LNNG K+VP+ LT Sbjct: 292 TVYKPIDKLVDLTFEIVDRLINNKSLNPPLMLNNGYKNVPTFFLT 336 >UniRef50_A4AIX2 Solute-binding protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AIX2_9ACTN Length = 342 Score = 267 bits (683), Expect = 4e-70, Method: Composition-based stats. Identities = 116/337 (34%), Positives = 176/337 (52%), Gaps = 18/337 (5%) Query: 2 KIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQK-DRDIFVKKAESLG--AKV 58 ++LL CT L E I + + + + R++ DR F K L +V Sbjct: 1 MFASLLLGGCT---LIGANGADAEYTIALLLPESKTARYEAYDRPFFEAKVAELCPKCEV 57 Query: 59 FVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIND 118 +A+ + Q Q E+ +G+ VLV+ P + +V A+ + V++YDR+I Sbjct: 58 IYANADQDPVKQQQQAESAFAQGISVLVLDPVDSSAAVTIVAAAQSRKVPVISYDRLIGS 117 Query: 119 ADIDFYISFDNEKVGELQAKAL-----VDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLK 173 ++ F++SFDNEKVG LQ KAL D + GN ++ GSP DNN++LF+ G V+ Sbjct: 118 PELAFWVSFDNEKVGSLQGKALIERLAADGLSSGNIAMINGSPTDNNSRLFKKGAHNVI- 176 Query: 174 PYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQ 233 D VV + W P+ A + M + +T N + V A+NDATAGGAI AL A Sbjct: 177 ---DGSAFTVVAEFDTPDWSPDKAQEWMASQVTQFGNSLVGVYAANDATAGGAIAALKAG 233 Query: 234 GLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTL 293 G+ ++GQDA+L I+RI +G Q MT+YK A AA AV L NG+ + Sbjct: 234 GVMPLPPVTGQDAELTAIQRIVSGDQYMTIYKDFKREAEIAATHAVALLNGKTLVGQSEE 293 Query: 294 NNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 NG +P+ LL+P+ V +NI +TV+ DG + ++ Sbjct: 294 TNG---IPTTLLSPVIVTIDNIMETVVADGLYTVEQI 327 >UniRef50_A5ZMP8 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZMP8_9FIRM Length = 376 Score = 266 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 115/370 (31%), Positives = 185/370 (50%), Gaps = 43/370 (11%) Query: 1 MKIKNILLTLCTSLLLTNVA-------AHAKEVKIGMAIDDLRLERWQKDRDIFVKKAES 53 MK K ++L + ++ +T+ A A A+ KIG+++ LERW +D ++ ++ Sbjct: 1 MK-KKLVLAMAATMAITSCAVPVLADDAAAEGGKIGISMPTQSLERWNRDGSYLEEQFKA 59 Query: 54 LGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYD 113 G V + ++ + Q++ I+N+I+ GV++LVI +G+ L+ V+ EA GI V+AYD Sbjct: 60 AGYDVELTYSDNETDRQVNDIQNLISDGVNLLVIAAIDGEALNTVMDEAADAGIPVIAYD 119 Query: 114 RMINDADIDFYISFDNEKVGELQAKALVDIV-------PQGNYFLMGGSPVDNNAKLFRA 166 R+I + +YISFDN VG LQ + ++D + N G P DNNA F Sbjct: 120 RLIKSDAVSYYISFDNYTVGTLQGQYVIDTLDLDNAGDKTYNIEFTAGDPADNNAGYFFN 179 Query: 167 GQMKVLKPYVDSGKIKVVGDQW------VDGWLPENALKIMENALT---ANNNKIDAVVA 217 G LKPY+D+G + VV Q W + AL+ M+N L A+ ++D + Sbjct: 180 GAYDTLKPYLDAGTLNVVSGQTDFDSVATAAWDTQTALERMQNILASYYADGTQLDVALC 239 Query: 218 SNDATAGGAIQALSA--QGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAA 275 SND+TA G QA+ + G + V I+GQD D A + I G Q+MTVYK + A Sbjct: 240 SNDSTALGVTQAIESDYAGKND-VLITGQDGDEANLANIVDGKQSMTVYKAVANEAVVTL 298 Query: 276 EIAVELGNGQEPKADTTLNNGL----------------KDVPSRLLTPIDVNKNNIKDTV 319 ++A + G N+ PS LL P V K+N+K+ + Sbjct: 299 DLAEAMLKGDTIDDSLITNSKWDFDCAYDTESYETSEGHKCPSFLLVPTVVTKDNMKEEL 358 Query: 320 IKDGFHKESE 329 + G++ + + Sbjct: 359 VDTGYYTQDD 368 >UniRef50_A0QT42 ABC transporter n=2 Tax=Actinomycetales RepID=A0QT42_MYCS2 Length = 365 Score = 265 bits (678), Expect = 1e-69, Method: Composition-based stats. Identities = 122/328 (37%), Positives = 180/328 (54%), Gaps = 21/328 (6%) Query: 24 KEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVD 83 + +G+A+ ERW D V + ++LG +Q + + Q+SQIENMI +GV Sbjct: 37 AKGTVGIAMPTKSSERWVADGQNMVDQFKALGYDTDLQYGDDVVQNQVSQIENMITKGVK 96 Query: 84 VLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIND-ADIDFYISFDNEKVGELQAKALVD 142 +LVI P +G L+N ++ A I V++YDR+I ++D+Y +FDN KVG LQA +VD Sbjct: 97 LLVIAPIDGSSLTNTLQHAADLKIPVISYDRLIKGTPNVDYYATFDNTKVGVLQANYIVD 156 Query: 143 IV----PQG--NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDG----- 191 + +G N L GSP DNNA F G M VL+PY+DSGK+ V Q Sbjct: 157 TLGVADGKGPFNLELFAGSPDDNNATYFFQGAMSVLQPYIDSGKLVVKSGQTTFDQIATL 216 Query: 192 -WLPENALKIMENALTANN--NKIDAVVASNDATAGGAIQALSAQGL----SGKVAISGQ 244 W A M+N L+ ++DAV++ D + G I AL + G ++GQ Sbjct: 217 RWDGGLAQSRMDNLLSQAYTSGRVDAVLSPYDGISRGVISALKSAGYGNAAKPLPIVTGQ 276 Query: 245 DADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKAD--TTLNNGLKDVPS 302 DA+LA +K I AG QT TV+K LA A + A + G P+ + T +NG+K VPS Sbjct: 277 DAELASVKSIVAGEQTQTVFKDTRELAKAAVQEADAVLTGGTPQVNDTETYDNGVKVVPS 336 Query: 303 RLLTPIDVNKNNIKDTVIKDGFHKESEL 330 LL P+ V+K+N K +I G++ E+++ Sbjct: 337 YLLDPVSVDKSNYKKVLIDSGYYTETQV 364 >UniRef50_B1G9I5 Monosaccharide-transporting ATPase n=2 Tax=Burkholderia graminis C4D1M RepID=B1G9I5_9BURK Length = 358 Score = 265 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 101/304 (33%), Positives = 174/304 (57%), Gaps = 1/304 (0%) Query: 28 IGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVI 87 IG + RW DR F K+A+ LG + +Q AN + TQ SQ++ M+++G+ LVI Sbjct: 50 IGFSFPSFDAFRWPHDRHYFEKRADELGLRYIIQGANEDVATQDSQVDAMLSQGIKALVI 109 Query: 88 IPYNGQVLSNVVKEAK-QEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVPQ 146 IP N +V+ K + I +++Y+ +I +D++ DN VGELQA+ + + Sbjct: 110 IPVNVDAGKQIVERVKREAKIPIISYNYVIPSTAVDYWAGRDNYFVGELQARQALQEAKK 169 Query: 147 GNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALT 206 GN+ ++ G + A+ G ++VLKP++DSG+I++V QW D W PE ALK +E+ALT Sbjct: 170 GNWVIVSGPEGIDVARQKTEGALRVLKPHIDSGEIRIVSHQWHDAWSPEGALKQVEDALT 229 Query: 207 ANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKP 266 ++NN I AV+++ D A GA++AL+ Q L+GKV + G+D + I AG M+ + Sbjct: 230 SHNNNIQAVISNEDGMALGALRALAEQKLAGKVWLCGEDCWPEVAREIVAGRINMSAWTD 289 Query: 267 ITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHK 326 + + AA+ A L +GQ P + ++ + +P + + VN+ + D + + + K Sbjct: 290 LIQMGRVAADAAFALTHGQVPPGNDSITVSGRKIPGMRIGSLGVNRTTLPDFLKRTDWLK 349 Query: 327 ESEL 330 +++ Sbjct: 350 PADI 353 >UniRef50_Q11DN9 D-xylose ABC transporter, periplasmic substrate-binding protein n=50 Tax=Bacteria RepID=Q11DN9_MESSB Length = 347 Score = 265 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 134/334 (40%), Positives = 196/334 (58%), Gaps = 8/334 (2%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVK-IGMAIDDLRLERWQKDRDIFVKKAESLGAKVF 59 MK + + L+ +A E K IG++ + + ERW+ D + E+ G Sbjct: 1 MKNTATAVLAGIAFSLSLSSAALAEGKTIGVSWSNFQEERWKTDEAAIKAQIEADGNTYI 60 Query: 60 VQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDA 119 A + Q++ +E++I +G + L+I+ + + V+ A EGI V+ YDR+I + Sbjct: 61 SADAQSSPAKQLTDVESLIAQGANALIILAQDASAVGPAVENAVAEGIPVIGYDRLIENP 120 Query: 120 DIDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSG 179 D FY++FDN++VG +QA+A+ ++ P+GNY + GS D NA GQM+VLK +DSG Sbjct: 121 D-AFYLTFDNKEVGRMQARAVFEVAPEGNYVFIKGSSADPNADFLFEGQMEVLKEAIDSG 179 Query: 180 KIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKV 239 KIK VG+ + DGWLP NA + ME LTANNN++ AVVASND TAGGAI AL AQGL+G V Sbjct: 180 KIKNVGEAYTDGWLPANAQRNMEQFLTANNNEVAAVVASNDGTAGGAIAALEAQGLAGSV 239 Query: 240 AISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNG---QEPKADTTLNNG 296 +SGQD D A + RIA GTQT++V+K L AA+IA +L G + + T G Sbjct: 240 PVSGQDGDHAALNRIALGTQTVSVWKDARELGKAAAQIANQLAEGTAMDQVEGATKWAEG 299 Query: 297 LKDV--PSRLLTPIDVNKNNIKDTVIKDGFHKES 328 V S L P+ + K+N+ + VI G+ + Sbjct: 300 PNKVEMNSVFLKPVPITKDNL-NLVIDAGWVTKD 332 >UniRef50_A9KQP6 Putative solute-binding component of ABC transporter n=4 Tax=Clostridiales RepID=A9KQP6_CLOPH Length = 355 Score = 263 bits (672), Expect = 8e-69, Method: Composition-based stats. Identities = 115/343 (33%), Positives = 181/343 (52%), Gaps = 21/343 (6%) Query: 6 ILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANG 65 + L C S + + +G+A+ L+RW +D K+ + G +V +Q A+ Sbjct: 15 VSLAGCGSKATSG---KGSDKLVGVAMPTKDLQRWNQDGSNMEKQLKDAGYEVDLQYASN 71 Query: 66 NEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD-IDFY 124 + +TQ+SQIENMI+ G +LVI G L V+ +AK++GI V+AYDR+I ++D + +Y Sbjct: 72 DVQTQVSQIENMISNGCKLLVIASIEGDSLGTVLAQAKKKGISVIAYDRLIMNSDAVSYY 131 Query: 125 ISFDNEKVGELQAKALVDIVP----QG--NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDS 178 +FDN VG Q + + + + +G N + G P DNNA+ F G M VLKPYVD Sbjct: 132 ATFDNYMVGTKQGEYIKEKLNLETAKGPFNLEIFTGDPGDNNARFFYGGAMDVLKPYVDG 191 Query: 179 GKIKVVGDQWV------DGWLPENALKIMENALT---ANNNKIDAVVASNDATAGGAIQA 229 G + V GW E A M+ + A+ K+DAV+ SND+TA G A Sbjct: 192 GVLVVKSGSVAFEKVATAGWSTETAQNRMDAIIASYYADGTKLDAVLCSNDSTALGVTNA 251 Query: 230 LSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKA 289 L+A ++GQD D+A +K + G Q+M+++K LA+ ++ + G E Sbjct: 252 LTASYKGEWPIVTGQDCDIANVKNMLDGKQSMSIFKDTRTLASQVVKMVDAIMKGGEAPV 311 Query: 290 DTT--LNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 + T +NG VPS L P+ + N K+ +I G++ E +L Sbjct: 312 NDTKSYDNGNGIVPSYLCEPVFADATNYKELLIDSGYYTEDQL 354 >UniRef50_D1PSG1 Sugar ABC transporter, periplasmic sugar-binding protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSG1_9FIRM Length = 398 Score = 262 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 109/335 (32%), Positives = 174/335 (51%), Gaps = 34/335 (10%) Query: 27 KIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLV 86 K+G+++ LERW +D ++ + G + + ++ + Q+S I+NMI GVD+LV Sbjct: 56 KVGLSMPTQSLERWNRDGSYLDQQFKDAGYETVITYSDNDTNRQVSDIQNMIADGVDLLV 115 Query: 87 IIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIV-- 144 + +G+ L+ V+ EA + GI V+AYDR+I + + +Y+SFDN VG LQ + +VD + Sbjct: 116 VAAIDGEALNTVMNEAGEAGIPVIAYDRLIMNDNASYYVSFDNYTVGTLQGQYIVDTLDL 175 Query: 145 ----PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQW------VDGWLP 194 N + G P DNNA F G M VL+PY+DSGK+ VV Q W Sbjct: 176 DNAAGPFNMEITAGDPADNNATYFYQGAMDVLQPYIDSGKLVVVSGQTDFDTVATAQWDS 235 Query: 195 ENALKIMENALT---ANNNKIDAVVASNDATAGGAIQALSA--QGLSGKVAISGQDADLA 249 + A++ +N L A+ ++D + SND+TA G QA+ + G S + I+GQD D A Sbjct: 236 QTAMERAQNVLASYYADGTQVDVWLCSNDSTALGVSQAIQSDYAG-SNQPIITGQDGDEA 294 Query: 250 GIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGL------------ 297 +K I G Q+MTVYK ++ A ++ + NG N+G Sbjct: 295 NLKNIVDGLQSMTVYKAVSNEAVVTLDLGKAILNGDTIDESLITNSGWDFDCSYDTESYF 354 Query: 298 ----KDVPSRLLTPIDVNKNNIKDTVIKDGFHKES 328 + PS LL P V K+N+ + ++ G++ + Sbjct: 355 TSDGNNCPSFLLVPDVVTKDNMTEKLVDTGYYTQD 389 >UniRef50_C5ESX5 Multiple sugar-binding periplasmic receptor chvE n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ESX5_9FIRM Length = 357 Score = 261 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 117/350 (33%), Positives = 184/350 (52%), Gaps = 21/350 (6%) Query: 2 KIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQ 61 ++ + L + + + +K+ IG+++ L R QKD++ K +G +V VQ Sbjct: 7 RLMVTCMVLGMAAMALGGCSSSKKKVIGVSLPTQDLARTQKDQEYLTKYLTEMGYEVNVQ 66 Query: 62 SANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRM-INDAD 120 G+ Q S IENMI GV L+I P++ ++ V++ A + I V++YD + +N Sbjct: 67 FGKGDANIQASSIENMITSGVAGLIISPFDSSSMTKVIELAHENNIPVISYDSLCLNTEY 126 Query: 121 IDFYISFDNEKVGELQAKALVDIV----PQG--NYFLMGGSPVDNNAKLFRAGQMKVLKP 174 ID+Y + D E +G QA+ +VD + +G N ++ G P DNNA F G M VL P Sbjct: 127 IDYYSADDLEGIGACQAQYIVDHLGVAEGKGPFNIEIVAGDPADNNATYFYKGAMDVLSP 186 Query: 175 YVDSGKIKVVGDQW------VDGWLPENALKIMENALTANNNK--IDAVVASNDATAGGA 226 Y++ G + V Q W A M++ L+ +DAV+ ND A GA Sbjct: 187 YLEDGSLVVPSGQIEFAVCGTPEWDGSKAQSRMDSILSTYYTDKRVDAVLTQNDGIALGA 246 Query: 227 IQALSAQGLSGK----VAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELG 282 I +L + G +GQD D+A IK I AG QTMTV+K I++LA AA++ L Sbjct: 247 ISSLKSVGYGSSDMPLPITTGQDCDIASIKSILAGEQTMTVFKDISVLAKNAADVIDSLV 306 Query: 283 NGQEPKAD--TTLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 G+EPK + TT NNG+KDV + L+ P ++K+N + + G++ + L Sbjct: 307 KGEEPKLENYTTFNNGVKDVKATLVIPKALDKDNCDELLFDSGYYSKDML 356 >UniRef50_A5FZZ2 Monosaccharide-transporting ATPase n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FZZ2_ACICJ Length = 369 Score = 260 bits (664), Expect = 7e-68, Method: Composition-based stats. Identities = 126/316 (39%), Positives = 188/316 (59%), Gaps = 7/316 (2%) Query: 22 HAKEVKIGMAIDDLRLERWQK-DRDIFVK--KAESLGAKVFVQSANGNEETQMSQIENMI 78 +K+ I + + R+++ DR F+K A AK+ V +AN + +TQ++Q E+ I Sbjct: 38 SSKKTTIAFLLPENSSPRYEQVDRPWFIKMAHAADPNAKLIVSNANSSPDTQLNQAESAI 97 Query: 79 NRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAK 138 + G DVLV+ P +G+ + +V A + +KV++YDR+I D+ D+Y+SFDN KVGELQ + Sbjct: 98 SNGADVLVVDPVDGKAGAAIVNYAARNHVKVISYDRLIQDSKPDYYVSFDNTKVGELQGE 157 Query: 139 ALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENA 197 + P G+ ++ G+P D NA FR G M VL P SGK+ + W P+NA Sbjct: 158 YIAKHTKPGGSVMMINGAPTDPNAFDFRKGAMNVLGPLFKSGKLHLAYSVMTPDWSPQNA 217 Query: 198 LKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAG 257 + + ALT +NK++AV+A+ND TA G I+AL A GL+GKV ++GQDA G+ I G Sbjct: 218 FEESQQALTRLHNKVNAVLAANDGTASGVIRALQAVGLAGKVPVTGQDATNGGLTFILEG 277 Query: 258 TQTMTVYKPITLLANTAAEIAVELGNGQEPKA---DTTLNNGLKDVPSRLLTPIDVNKNN 314 Q+MTV+K + A AAE+AV + +P A + NN + DVPS LL P+ V K N Sbjct: 278 LQSMTVFKYVPEEAAAAAELAVAVATDTKPPAGLLNGKTNNKMIDVPSVLLKPLVVTKAN 337 Query: 315 IKDTVIKDGFHKESEL 330 I +VIK G+ + Sbjct: 338 IAGSVIKSGYTTWKAI 353 >UniRef50_P25548 Multiple sugar-binding periplasmic receptor chvE n=76 Tax=Bacteria RepID=CHVE_AGRT5 Length = 354 Score = 259 bits (663), Expect = 7e-68, Method: Composition-based stats. Identities = 134/353 (37%), Positives = 192/353 (54%), Gaps = 23/353 (6%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVK--IGMAIDDLRLERWQKDRDIFVKKAESLGAKV 58 MK L+ C + A + K +G+A+ RW D + VK+ + G K Sbjct: 1 MKSIISLMAACAIGAASFAAPAFAQDKGSVGIAMPTKSSARWIDDGNNIVKQLQEAGYKT 60 Query: 59 FVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI-N 117 +Q A+ + Q+SQIENM+ +GV VLVI +G LS+V+K+A ++GIKV+AYDR+I N Sbjct: 61 DLQYADDDIPNQLSQIENMVTKGVKVLVIASIDGTTLSDVLKQAGEQGIKVIAYDRLIRN 120 Query: 118 DADIDFYISFDNEKVGELQAKALVDIV----PQG--NYFLMGGSPVDNNAKLFRAGQMKV 171 D+ +Y +FDN +VG LQA ++ D + +G N L GGSP DNNA F G M V Sbjct: 121 SGDVSYYATFDNFQVGVLQATSITDKLGLKDGKGPFNIELFGGSPDDNNAFFFYDGAMSV 180 Query: 172 LKPYVDSGKIKVVGDQWVDG------WLPENALKIMENALTANNN--KIDAVVASNDATA 223 LKPY+DSGK+ V Q W P A M+N L+A K+DAV++ D + Sbjct: 181 LKPYIDSGKLVVKSGQMGMDKVGTLRWDPATAQARMDNLLSAYYTDAKVDAVLSPYDGLS 240 Query: 224 GGAIQALSAQGLSGK----VAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAV 279 G I +L G K +SGQDA++ +K I AG Q T++K LA + Sbjct: 241 IGIISSLKGVGYGTKDQPLPVVSGQDAEVPSVKSIIAGEQYSTIFKDTRELAKVTVNMVN 300 Query: 280 ELGNGQEPKAD--TTLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 + G+EP+ + T NG+K VPS LL P+ V K N K ++ G++KE +L Sbjct: 301 AVMEGKEPEVNDTKTYENGVKVVPSYLLKPVAVTKENYKQVLVDGGYYKEDQL 353 >UniRef50_Q2NWM4 Putative xylose ABC transporter periplasmic component n=2 Tax=Enterobacteriaceae RepID=Q2NWM4_SODGM Length = 235 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 176/216 (81%), Positives = 194/216 (89%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFV 60 MK+ N+LLT+C +L A AK++KIGMA+DDLRLERWQKDRDIFV KAE LGA VFV Sbjct: 1 MKLNNLLLTVCAIGVLACQPALAKQLKIGMAVDDLRLERWQKDRDIFVSKAELLGASVFV 60 Query: 61 QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD 120 QSANGNEETQMSQ+ENMIN G+DVLVIIPYNGQVL+NV+ EAKQEGIKV AYDR+IN+AD Sbjct: 61 QSANGNEETQMSQVENMINFGMDVLVIIPYNGQVLTNVIAEAKQEGIKVRAYDRIINNAD 120 Query: 121 IDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGK 180 +DFYISFDNE+VGELQA +LV VPQGNYFLMGGSPVDNNAKLFRAGQM VLKP +DSG+ Sbjct: 121 VDFYISFDNERVGELQANSLVKRVPQGNYFLMGGSPVDNNAKLFRAGQMNVLKPLIDSGR 180 Query: 181 IKVVGDQWVDGWLPENALKIMENALTANNNKIDAVV 216 IKVVGDQW DGWLPENALKIMENALTANNN IDAVV Sbjct: 181 IKVVGDQWADGWLPENALKIMENALTANNNHIDAVV 216 >UniRef50_A9KQP5 Periplasmic binding protein/LacI transcriptional regulator n=6 Tax=Clostridiales RepID=A9KQP5_CLOPH Length = 347 Score = 253 bits (647), Expect = 6e-66, Method: Composition-based stats. Identities = 127/305 (41%), Positives = 183/305 (60%), Gaps = 6/305 (1%) Query: 27 KIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLV 86 +IGM+ D +ERWQ+DRDIFV A LGA+V VQ+A+G+ Q+ QIE I + VD +V Sbjct: 38 QIGMSFDSFVIERWQRDRDIFVATANDLGAEVNVQNASGDVNEQVRQIEYFIEKQVDAIV 97 Query: 87 IIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDI-VP 145 II + + LS VVK+AK++GIK++AYDR+I +AD+D YISFDNE VG++ A A V+ + Sbjct: 98 IIGIDSEKLSTVVKKAKEKGIKIIAYDRLIMNADVDLYISFDNEAVGKMMASAFVENGLT 157 Query: 146 QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENAL 205 +G + G DNN + G V+K + I+++ D W E K + + Sbjct: 158 KGKVLMFCGPMTDNNVSMIEKGFQSVIKEH----DIEILDILHADNWRAEETRKYVNEHI 213 Query: 206 TANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYK 265 + DA++ ND AG I L+ L+GKV + GQDADL +RI GTQ MTVYK Sbjct: 214 DV-VKEADAIMCGNDGLAGQTIYDLAELRLAGKVMVVGQDADLEACQRIVEGTQLMTVYK 272 Query: 266 PITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFH 325 P+ LA AAE ++L G+E A + +N+G DVP L I V N+++ +I GFH Sbjct: 273 PVAKLAQAAAEDTIKLVLGEELGATSEINDGSYDVPYIALETIAVTAKNLEEVIINSGFH 332 Query: 326 KESEL 330 + ++ Sbjct: 333 LKEDV 337 >UniRef50_D2Q8V2 ABC transporter (Substrate-binding protein) n=2 Tax=Bifidobacterium dentium RepID=D2Q8V2_9BIFI Length = 371 Score = 253 bits (646), Expect = 7e-66, Method: Composition-based stats. Identities = 121/330 (36%), Positives = 185/330 (56%), Gaps = 22/330 (6%) Query: 22 HAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRG 81 A +V IG+++ + LERW+ D K+ E G KV +Q A+G + Q SQI+NM N G Sbjct: 38 DASDVNIGISMPEQMLERWKIDGSNLKKQLEGYGYKVTLQYADGKTDLQTSQIQNMANNG 97 Query: 82 VDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD-IDFYISFDNEKVGELQAKAL 140 +D +V+ +G ++A+ G K++AYDR+I + D +D+Y +F E+VG++Q + + Sbjct: 98 MDYVVVASIDGTSTGAACEQAQSNGAKIIAYDRLIMNTDAVDYYATFSLEEVGKMQGEYI 157 Query: 141 VDIVP-----QG--NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKI-----KVVGDQW 188 + +G N LM GSP DNNA + G VL Y SG + KV D+ Sbjct: 158 EKALGLKDGKKGPFNVELMAGSPTDNNAGYYFKGAWSVLGKYYKSGVLQAKSGKVPADET 217 Query: 189 ------VDGWLPENALKIMENALTANNN---KIDAVVASNDATAGGAIQALSAQGLSGKV 239 +D W + A MEN + + N K+DAV+A NDA A G + A+ G Sbjct: 218 EWQSIGIDNWDRQKAQNEMENRINSFYNDGTKLDAVLAQNDAEALGTVNAVEGAGWDYYP 277 Query: 240 AISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKD 299 I+GQDA+ A ++ I G Q+ TVYK LA A++ +L +G+EP+A T NNG KD Sbjct: 278 VITGQDAEKANVQAIVKGKQSETVYKDTRELAKATAQMIKDLVDGKEPEAKDTFNNGTKD 337 Query: 300 VPSRLLTPIDVNKNNIKDTVIKDGFHKESE 329 VP++LLTP+ V+K N+K+ ++ G+ + Sbjct: 338 VPTQLLTPVSVDKTNLKEVLVDGGYISAKD 367 >UniRef50_C2AIY5 Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=1 Tax=Tsukamurella paurometabola DSM 20162 RepID=C2AIY5_TSUPA Length = 366 Score = 249 bits (637), Expect = 7e-65, Method: Composition-based stats. Identities = 124/342 (36%), Positives = 184/342 (53%), Gaps = 24/342 (7%) Query: 7 LLTLCTSLLLTNVAAHAKE--------VKIGMAIDDLRLERWQK-DRDIFVKKAESLG-- 55 L + LT A++ + I + + + + R++ D+ +F KK L Sbjct: 16 LAVALGAASLTACNANSSQKSGDAGGGNTIALLLPESKTTRYEAFDKPLFEKKVAELCSS 75 Query: 56 AKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRM 115 KV +A+ +E Q Q+E I G +V+ P NG +V AK I V+AYDR Sbjct: 76 CKVSYYNADQDEAKQSQQVETAITAGAKAIVLGPVNGDGAGGMVASAKNAKIPVIAYDRF 135 Query: 116 INDADIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKP 174 I AD +Y+SFDNE+VG +Q K+LVD + +GN ++ G+P D NA F+AG V+ Sbjct: 136 IAGAD--YYLSFDNEQVGRIQGKSLVDALGGRGNILMLNGAPSDPNAAQFKAGARSVIGQ 193 Query: 175 YVDSGKIKVVGDQWVDGWLPENALKIMENALTANNN-KIDAVVASNDATAGGAIQALSAQ 233 I+V+G+ W P+ A + + + L+ N I V A+ND AGG + AL+ Sbjct: 194 ----SGIRVIGEYDNPDWSPDKAQQFVTDQLSRNKPSDIQGVYAANDGQAGGVVAALTGA 249 Query: 234 GLSGK--VAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADT 291 G+S I+GQDA+LA ++RI AG Q+MTVYKPI + ANTAAE+AV L G++ T Sbjct: 250 GVSADALPPITGQDAELAAVQRIVAGRQSMTVYKPIAIEANTAAEVAVALATGKDVPTTT 309 Query: 292 ---TLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 + KDV S + TPI V K N+ TV+ D F+ ++ Sbjct: 310 ASGIQRSTFKDVSSYIFTPIAVTKANVASTVVADKFYTADQI 351 >UniRef50_C7REM6 Periplasmic binding protein/LacI transcriptional regulator n=5 Tax=Firmicutes RepID=C7REM6_ANAPD Length = 316 Score = 249 bits (637), Expect = 8e-65, Method: Composition-based stats. Identities = 65/268 (24%), Positives = 129/268 (48%), Gaps = 10/268 (3%) Query: 25 EVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDV 84 ++KIG+++ L + R+ + A + + A + TQ +Q+E++I +GVD+ Sbjct: 49 DMKIGVSLSTLNNPFFVSIREGVEEAAGKENVETVITDAQNDSSTQNNQVEDLITQGVDL 108 Query: 85 LVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIV 144 +VI P + ++ V++A + I V+ DR + ++ +I+ +N + G+L + +++ V Sbjct: 109 IVINPVDSTAIATSVEKANEANIPVICVDRGSDQGELVSFIASNNVEGGKLAGEYILEKV 168 Query: 145 PQGNYFL-MGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMEN 203 + + + G P ++ + G + +GKI ++ Q + + +MEN Sbjct: 169 GENAEVIQLEGIPGASSTRERGEGFEEA-----TNGKINLLASQTA-NFDRAEGMTVMEN 222 Query: 204 ALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTV 263 L A+ + + AV ND A GA +A+ A G V I G D + IK + G + TV Sbjct: 223 LLQAHPD-VKAVFCQNDEMALGASEAIKASGKD--VTIVGFDGNEDAIKAVEEGNLSATV 279 Query: 264 YKPITLLANTAAEIAVELGNGQEPKADT 291 + + A E A++ G+E + Sbjct: 280 AQKPKEMGKLAIETAIKYLKGEEVEETV 307 >UniRef50_C1RNE3 Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=4 Tax=Actinobacteria (class) RepID=C1RNE3_9CELL Length = 376 Score = 248 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 115/340 (33%), Positives = 185/340 (54%), Gaps = 27/340 (7%) Query: 17 TNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIEN 76 T A +++ +G+A+ LERW +D + G + +Q A+ + Q++Q+EN Sbjct: 36 TGDAGSSEDTVVGIAMPTKALERWNRDGAHLEGLLQDAGFETSLQFADNKVDQQITQLEN 95 Query: 77 MINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIND-ADIDFYISFDNEKVGEL 135 MIN+G D+LVI +G L+ +++A ++GI V+AYDR+IND ++D+Y +FDN VG++ Sbjct: 96 MINQGADILVIASIDGTALAPTLEQAAEQGITVIAYDRLINDTPNVDYYATFDNYGVGKM 155 Query: 136 QAKALVDIV------PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQW- 188 Q + +V+ + N GSP DNNAK F AG VLK YVDSG++ V + Sbjct: 156 QGEFIVEQLDLAGGAGPFNLEPFAGSPDDNNAKFFFAGAWDVLKEYVDSGQLVVPSGKAP 215 Query: 189 ----------VDGWLPENALKIMENALT---ANNNKIDAVVASNDATAGGAIQALSAQGL 235 V GW + A MEN L A K+D V++ ND+ A G QAL+ G Sbjct: 216 ASNDDWQSIGVQGWSSDTAQSEMENRLNSFYAGGTKVDVVLSPNDSLALGIAQALAGNGY 275 Query: 236 SGK---VAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKAD-- 290 + ++GQDAD A + + G Q+M+V+K L + A + ++ G E + + Sbjct: 276 APGPDYPILTGQDADKANVLNMIEGKQSMSVWKDTRTLGDRTATMIEQIVAGDEVEVNDE 335 Query: 291 TTLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 T +NG K VP+ LL P + + ++ T++ GF+ ++L Sbjct: 336 ETYDNGEKVVPTYLLPPQVITPDTVQ-TLVDSGFYTAADL 374 >UniRef50_D2Q1K0 Xylose ABC transporter, substrate-binding protein n=77 Tax=Bacteria RepID=D2Q1K0_9ACTO Length = 379 Score = 248 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 119/338 (35%), Positives = 179/338 (52%), Gaps = 29/338 (8%) Query: 22 HAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRG 81 +++ IG+++ ERW D +K E+ G +V +Q AN + TQ Q++ MI RG Sbjct: 36 KPEDLTIGVSMPTQTSERWIADGKAVKEKLEAKGYQVDLQYANDDIPTQSQQVDQMITRG 95 Query: 82 VDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDA-DIDFYISFDNEKVGELQAKAL 140 DVL+I +G LS+ ++ A + I V+AYDR+I + +++FY+SFDN KVG QAKAL Sbjct: 96 ADVLIIAAIDGTALSSQLQAAADKSIPVVAYDRLIRGSKNVNFYVSFDNFKVGVAQAKAL 155 Query: 141 VDIVP-------QG------NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQ 187 + + +G N L GS DNN + F G M+ LKPY D+G + V Q Sbjct: 156 LRGLGLETPDGSKGSKTGPVNIELFAGSLDDNNTQYFFGGAMQTLKPYFDNGSLVVKSKQ 215 Query: 188 W------VDGWLPENALKIMENALTANNN---KIDAVVASNDATAGGAIQALSAQGL--- 235 W E A K ME+ LT++ N K+ V++ D + G I AL G Sbjct: 216 TGMEQVATLRWQQEAAQKRMEDLLTSSYNDGAKVGGVLSPYDGISRGIITALHNAGYGTP 275 Query: 236 -SGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKAD--TT 292 + I+GQDA++A +K I G Q+ T++K LLA A A +EP+A+ T Sbjct: 276 ANPTPVITGQDAEIASVKLIDTGVQSSTIFKDTRLLAEQAVNAAEAFLQKKEPEANDTKT 335 Query: 293 LNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 +NG K VP+ LL V K +IK ++ G++ +E+ Sbjct: 336 YDNGTKVVPAYLLPIQTVFKEDIKKQLVDTGYYTAAEV 373 >UniRef50_C7MA39 Monosaccharide-binding protein n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MA39_BRAFD Length = 383 Score = 247 bits (632), Expect = 3e-64, Method: Composition-based stats. Identities = 123/342 (35%), Positives = 175/342 (51%), Gaps = 32/342 (9%) Query: 21 AHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINR 80 A E +G+A+ ERW D + + E G V +Q A+ + TQ QI+ MIN Sbjct: 37 APPSEQTVGVAMPTQTYERWVADGNNIKEGLEGKGFTVDMQYADDDIPTQQQQIDQMINS 96 Query: 81 GVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI-NDADIDFYISFDNEKVGELQAKA 139 GV VL+I +G LS + A GI V+AYDR++ + ++DFY++FDN KVG QA A Sbjct: 97 GVSVLLIASIDGASLSAQLDAAAAAGIPVVAYDRLLTDSENVDFYVTFDNYKVGVNQANA 156 Query: 140 L-------------VDIVPQG--NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVV 184 L D P+G N L GS DNNA LF G + L+PY D G ++V+ Sbjct: 157 LLYGLGLLDESFEPADDAPEGPLNVELFAGSLDDNNAHLFWDGAIDTLQPYFDDGTLEVL 216 Query: 185 GDQW------VDGWLPENALKIMENALTANNN---KIDAVVASNDATAGGAIQALSAQGL 235 Q W E A K ME LT + N ++ V+A D + G I AL GL Sbjct: 217 SGQMDIDQAATQRWEQETAQKRMETLLTTHYNGGEELAGVLAPADPLSRGIINALQNTGL 276 Query: 236 -----SGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKAD 290 G ++GQDA++A IK IA G Q T++K LA+ A A + G EP+A+ Sbjct: 277 GPTIDEGLPIVTGQDAEIASIKLIADGVQHSTIFKDTRDLADQAIVAAESILTGGEPEAN 336 Query: 291 --TTLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 T +NG K VPS LL V ++N ++ ++ G++ E ++ Sbjct: 337 DTETYDNGAKVVPSYLLEVQMVLESNYEEILVDSGYYTEEQV 378 >UniRef50_UPI0001C31C00 xylose binding protein transport system n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31C00 Length = 373 Score = 247 bits (631), Expect = 5e-64, Method: Composition-based stats. Identities = 116/316 (36%), Positives = 181/316 (57%), Gaps = 9/316 (2%) Query: 24 KEVKIGMAID--DLRLERWQKDRDIFVKKAESL--GAKVFVQSANGNEETQMSQIENMIN 79 +++ I + +D+ +F + + GAKV +A G+ Q++Q E+ I Sbjct: 46 EDLTIAFLMPCSTCADRFENQDKPLFEAAVKEIAPGAKVIANNAEGDSARQVTQTESAIT 105 Query: 80 RGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKA 139 G DV+V+ P + + + +A+Q I V++YD ++ D +DFY+SFDNE+VGELQ + Sbjct: 106 NGADVIVVSPLDEAAGAAIADKAEQARIPVVSYDGLLTDGTVDFYVSFDNERVGELQGEY 165 Query: 140 LVDIVPQG-NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENAL 198 L + G + + G + F+AG + L P ++SG++++ + + P+ Sbjct: 166 LARELRDGASIAFINGDQSIAPGRQFKAGAHRALDPLIESGRLRLAYEGDAQQFDPQKGR 225 Query: 199 KIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGT 258 +ME ALT N+++D V+A+ND AGG + AL + L+GKV ++GQDA AG++RI G Sbjct: 226 TLMEQALTRLNDRVDGVIAANDGLAGGVVNALEPRNLTGKVLVTGQDATDAGLQRILLGQ 285 Query: 259 QTMTVYKPITLLANTAAEIAVELGNGQEPK----ADTTLNNGLKDVPSRLLTPIDVNKNN 314 QTM+VYK I A AAE+AV LG G K A +T +NG DVPS LL P+ V ++N Sbjct: 286 QTMSVYKAIKQEAEAAAEVAVALGEGDAEKVRSMATSTTDNGAGDVPSILLEPVVVTQDN 345 Query: 315 IKDTVIKDGFHKESEL 330 I DTV DGF E + Sbjct: 346 IVDTVFADGFTTEERV 361 >UniRef50_Q65E53 RbsB n=6 Tax=Firmicutes RepID=Q65E53_BACLD Length = 304 Score = 246 bits (628), Expect = 8e-64, Method: Composition-based stats. Identities = 76/302 (25%), Positives = 141/302 (46%), Gaps = 21/302 (6%) Query: 1 MKIKNILLTLCTSLLLTNVA-----------AHAKEVKIGMAIDDLRLERWQKDRDIFVK 49 MK + T L L+ + ++KIG+++ L+ + ++ VK Sbjct: 1 MKKTLTVFTALALLFLSACSLEPPEWAKPNKEKGTDIKIGLSVSTLKNPFFVSLKNGVVK 60 Query: 50 KAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKV 109 +A+ G +V V A + Q + +E+++ +GVD L+I P + +S V+ A GI V Sbjct: 61 EAKKQGIEVIVVDAQDDSAKQTNDVEDLLQQGVDALLINPADSSAISTAVQSANSLGIPV 120 Query: 110 LAYDRMINDADIDFYISFDNEKVGELQAKALVDIVPQG-NYFLMGGSPVDNNAKLFRAGQ 168 + DR + ++ ++ DN K G++ A +V+ + +G + G P + + +G Sbjct: 121 VTLDRSAENGKVETLVASDNVKGGQMAADFIVEQLGKGAKVAELEGVPGASATRERGSGF 180 Query: 169 MKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQ 228 K K+ V+ Q D + L +MEN L N I AV A ND A GAI+ Sbjct: 181 HKTADD-----KLNVIAKQTAD-FDRTKGLNVMENLL-QGNPDIQAVFAHNDEMALGAIE 233 Query: 229 ALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPK 288 A+ + G ++ + G D + +K + AG + T+ + L+ A + A ++ NG++ + Sbjct: 234 AIRSSGK--EILVVGFDGNEDAVKAVQAGDMSATIAQQPELIGKLAVQAARDILNGKKVE 291 Query: 289 AD 290 Sbjct: 292 KT 293 >UniRef50_C0C295 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C295_9CLOT Length = 330 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 83/302 (27%), Positives = 142/302 (47%), Gaps = 16/302 (5%) Query: 19 VAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMI 78 + IG + + E + KKAE LG + + A + + Q++QIEN+I Sbjct: 38 ASKKDGGYTIGCTVYYMT-EFVTLMTEGMEKKAEELGCDLVMLDAQQDAQNQITQIENLI 96 Query: 79 NRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAK 138 + VDV+++ + + ++ GI ++ + + N + Y+ D+ GEL+ + Sbjct: 97 AQKVDVIIVAAVDSDAILPAIEMCDDAGIPLVGVNMLFNTEEPYHYVGPDDVLAGELEMQ 156 Query: 139 ALVD-IVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENA 197 +D I +GN ++ G + G +L Y GKI V+ DQ W E A Sbjct: 157 NAIDEIGGEGNVVILEGPIGQSAQIQRLEGNQNILDKY--EGKINVLADQTA-NWSREEA 213 Query: 198 LKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAG 257 L ++EN L + KIDA+VA ND A GAIQAL A GL+ K+ ++G DA L G + G Sbjct: 214 LTLVENWLETFSGKIDAIVAHNDEMALGAIQALEAAGLTDKIVVTGVDAILDGCNAVKDG 273 Query: 258 TQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKD 317 T TVY+ L + A + A ++ G+ + + + + + K+N+ + Sbjct: 274 TLLGTVYQDAGLEGSEAVQKAYDVLEGKVTEKELSY-----------IDMKWITKDNVDE 322 Query: 318 TV 319 + Sbjct: 323 LL 324 >UniRef50_D0LRU4 D-xylose transporter subunit XylF n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LRU4_HALO1 Length = 374 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 116/327 (35%), Positives = 190/327 (58%), Gaps = 18/327 (5%) Query: 19 VAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMI 78 A +K+G + ++ ER+Q+D+ F+ KA+SLGA+V SAN NE+TQ+S+ E M+ Sbjct: 45 TPAEEGPLKVGFLLKTMQEERYQRDKKAFIDKAQSLGAEVLFDSANNNEQTQLSKFETML 104 Query: 79 NRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAK 138 +G V+V+ P N N+VK A +EG++V+ YD M+ + +D + D+ VG+LQ + Sbjct: 105 AQGAKVIVLQPVNTGTAGNMVKMANEEGVRVVGYDSMLVNGPLDVQVMQDSWAVGKLQGE 164 Query: 139 ALVDIVP-------QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDG 191 A+V+ + +G L+ G P D+NA G + ++ ++ +++V ++ +G Sbjct: 165 AMVEWLKAKNDGKVEGKVALIKGQPGDSNANAMSEGALTIIN---ENEGLELVAEESHEG 221 Query: 192 WLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSG--KVAISGQDADLA 249 W + A+ EN LT N +DA +A+N A G I AL QGL KV ++G DADL Sbjct: 222 WSSDKAMATAENVLTKYENGVDAFIANNSGMARGVIAALQNQGLDDATKVFVAGSDADLV 281 Query: 250 GIKRIAAGTQTMTVYKPITLLANTAAEIAVELGN------GQEPKADTTLNNGLKDVPSR 303 I+ +A G Q + ++K IT LA TAAEIAV L + +AD T+NNG +VP+ Sbjct: 282 NIQYVAQGKQAVEIWKKITPLAETAAEIAVTLAKSPDKPVTELVEADRTINNGAVEVPTI 341 Query: 304 LLTPIDVNKNNIKDTVIKDGFHKESEL 330 + + V K+N++DTV+ F+ + ++ Sbjct: 342 VTPVVLVTKDNVEDTVVAGEFYTKEQV 368 >UniRef50_D1C9K0 ABC-type xylose transport system periplasmic component-like protein n=3 Tax=Bacteria RepID=D1C9K0_SPHTD Length = 434 Score = 245 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 123/324 (37%), Positives = 180/324 (55%), Gaps = 11/324 (3%) Query: 18 NVAAHAKEVKIGMAIDDLRLERWQ-KDRDIFVKKAESL--GAKVFVQSANGNEETQMSQI 74 + ++ I + + + + R++ DR F + L ++ +AN + TQ Q Sbjct: 96 ATPSDTEDGTIALLLPETKTARYESADRPFFEAYFQELCPNCQIIYNNANQDAATQQQQA 155 Query: 75 ENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI-NDADIDFYISFDNEKVG 133 E + G VLV+ P + + + ++A+ +G+ V+AYDR I N + +YISFDN +VG Sbjct: 156 EAALTNGAQVLVLDPVDSAAAAAIAEQAQAQGVPVIAYDRAILNSEGVSYYISFDNVEVG 215 Query: 134 ELQAKALVDIV---PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVD 190 LQA+ LVD + ++ GSP DNNA F+ G V P VD+G++ + + Sbjct: 216 RLQAQTLVDALEGVDDPQIVMINGSPTDNNAGEFKEGAHSVFDPLVDAGELTIAMEYDTP 275 Query: 191 GWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAG 250 W P+ A M+ ALTA N++D V A+ND TA GAI A+ A G+S ++GQDA+LAG Sbjct: 276 DWSPDQAQNEMQQALTALGNQVDGVYAANDGTASGAIAAMKAAGISPLPPVTGQDAELAG 335 Query: 251 IKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADT----TLNNGLKDVPSRLLT 306 I+RI G Q MTVYK I A AAE+A L GQ+ T NNG DVP+ LLT Sbjct: 336 IQRILIGEQYMTVYKAIQPEAEIAAELAFALLTGQDVPESVTGGQTANNGATDVPAILLT 395 Query: 307 PIDVNKNNIKDTVIKDGFHKESEL 330 P+ V ++NI DTV+ D F E+ Sbjct: 396 PVAVTQDNIADTVVADDFWTVDEI 419 >UniRef50_UPI0001BC53E3 D-xylose ABC transporter, periplasmic substrate-binding protein n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=UPI0001BC53E3 Length = 336 Score = 245 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 98/335 (29%), Positives = 183/335 (54%), Gaps = 8/335 (2%) Query: 2 KIKNILLTLCTSLLLTNV----AAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAK 57 +K ILL L + ++ A+ + KIG++ RW+++++ +A+ LG K Sbjct: 1 MLKKILLYLGVMIFFISMIGCKQANKNKGKIGVSFGVGEAIRWKQEKEYMQNRADELGIK 60 Query: 58 VFV-QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI 116 + + + +TQ +I+ +DVL+I P N +S ++K A+++ +KV++Y R+I Sbjct: 61 IEIKLNTKDKPKTQEEDCFELIDSEIDVLIITPRNVNDMSKIIKYAEKKKVKVISYARII 120 Query: 117 NDADIDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYV 176 +D Y+ +D++++G++ + L + V +GNY L+ G D NA L G ++ ++P Sbjct: 121 LKEKVDLYVGYDSKRMGQMLGQYLAEKVYKGNYILLKGDENDENANLLYEGALRYIEPIK 180 Query: 177 DSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS 236 + I V+ D + W P+ A +++ +A+ ANNNKIDA++A ND A G ++A+ ++ Sbjct: 181 N--DINVILDTSISNWSPKVAKELVTSAIKANNNKIDAILAPNDKIAEGCVEAIEELNIN 238 Query: 237 GKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNG 296 + I+G DA+L+ +KRI Q +T+Y + LA TA + A + + + + +N Sbjct: 239 RNITITGMDAELSAVKRILNEKQDVTIYMDLKELAYTAIDEAFSMIHNKPISTNAEYDNQ 298 Query: 297 L-KDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 K +PS L+T V K NI +I+ E+ Sbjct: 299 SGKKIPSHLITGRLVTKQNIDRILIESKVFTREEI 333 >UniRef50_C3QNV9 Sensor protein n=5 Tax=Bacteroides RepID=C3QNV9_9BACE Length = 960 Score = 244 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 76/303 (25%), Positives = 123/303 (40%), Gaps = 11/303 (3%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFV 60 MK + L L L A +IG+A R + + +I + G V + Sbjct: 5 MKYMKWITVLFCLLGLAACRQDAPRFRIGVAQCSDDSWRHKMNDEILREAMFYDGVSVEI 64 Query: 61 QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD 120 +SA + Q + I++GVD+L+I ++ +V+EA Q+GI V+ DR I Sbjct: 65 RSAADDNRKQAEDVHYFIDKGVDLLIISANEAAPMTPIVEEAYQKGIPVILVDRKILSDK 124 Query: 121 IDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSG 179 YI DN ++G + + +GN + G A G M + Y D Sbjct: 125 YTAYIGADNYEIGRAVGNYIASSLKGKGNVVELTGLGGSTPAMERHQGFMAAISNYPD-- 182 Query: 180 KIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKV 239 IK++ W E A M++ L + KIDAV A ND A GA QA G ++ Sbjct: 183 -IKLIDKADAA-WEREPAEVEMDSML-RRHPKIDAVYAHNDRIAPGAYQAAKKAGREKEM 239 Query: 240 AISGQDADLA---GIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNG 296 G DA G++ + T P + ++A+ + + +T +N Sbjct: 240 IFVGIDALPGKGNGLELVLDNVLDATFIYPTN--GDKVMQLAMNILEKKSYPRETVMNTA 297 Query: 297 LKD 299 + D Sbjct: 298 VVD 300 >UniRef50_B1VWK1 Putative ABC transporter solute-binding protein n=7 Tax=Streptomyces RepID=B1VWK1_STRGG Length = 370 Score = 244 bits (622), Expect = 5e-63, Method: Composition-based stats. Identities = 119/325 (36%), Positives = 173/325 (53%), Gaps = 18/325 (5%) Query: 18 NVAAHAKEVKIGMAIDDLRLERWQK-DRDIFVKKAESL---GAKVFVQSANGNEETQMSQ 73 ++KIG+ + + + R++K DR I KK L KV +A + Q Sbjct: 37 GSEKKGDDLKIGLLLPENQTARYEKFDRPIIEKKISELTGGKGKVTYANAKQDANAQAQH 96 Query: 74 IENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVG 133 ++ MI VD L++ + + ++N +K+AK GI V+A+DR+ ID Y SFDNE+VG Sbjct: 97 VDTMITNKVDALIVGAVDSKAIANSIKKAKDAGIPVVAFDRLAEG-PIDAYTSFDNEEVG 155 Query: 134 ELQAKALVDIVPQ----GNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWV 189 Q AL++ + G +M G+ D NA LF+ G VL GK+K + Sbjct: 156 RAQGTALLEALGDKADGGTIVMMNGAITDPNAALFKKGAKSVLD-----GKVKYGKEYDT 210 Query: 190 DGWLPENALKIMENALTANN-NKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADL 248 W PENA ME A+TA +KID V ++ND AGG I AL G+S ++GQDA+L Sbjct: 211 KEWKPENANANMEAAITALGKDKIDGVYSANDGMAGGIITALKGAGISPLPPVTGQDAEL 270 Query: 249 AGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLN---NGLKDVPSRLL 305 AG++RI G Q M+VYK AAE+AV L G++ + T K +P+ L+ Sbjct: 271 AGVQRIVTGEQFMSVYKSYPAEGIVAAEMAVALAKGEKLDSIATSKVDSATTKGIPTVLV 330 Query: 306 TPIDVNKNNIKDTVIKDGFHKESEL 330 + + K+NIKDTVIKDG E+ Sbjct: 331 PVVSLTKDNIKDTVIKDGIWTLDEI 355 >UniRef50_C6PMK5 ABC transporter (Substrate-binding protein) n=6 Tax=Firmicutes RepID=C6PMK5_9CLOT Length = 366 Score = 242 bits (619), Expect = 9e-63, Method: Composition-based stats. Identities = 119/351 (33%), Positives = 186/351 (52%), Gaps = 26/351 (7%) Query: 6 ILLTLCTSLLLTNVAAHAKEVK---IGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQS 62 + L+ C S ++ K IG+A+ L+RW +D + K+ E+ KV +Q Sbjct: 15 LSLSACGSKPAATTSSADDGGKTSLIGVAMPTQSLQRWNQDGENMKKQLEAKKYKVDLQY 74 Query: 63 ANGNEETQMSQIENMINRG-VDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI-NDAD 120 AN + Q+ IENMIN+ V L++ P +L ++K+A GIKV+AYDR+I + Sbjct: 75 ANNDVNAQVQSIENMINKKIVKFLLLHPLMVLLLQMLLKKASDNGIKVIAYDRLIMKSPN 134 Query: 121 IDFYISFDNEKVGELQAKALVDIV----PQG--NYFLMGGSPVDNNAKLFRAGQMKVLKP 174 +D+Y +FDN KVG +Q + + + +G N L GGSP DNNA F G M VL+P Sbjct: 135 VDYYATFDNFKVGAIQGQYIEKKLGLKDGKGPFNIELFGGSPDDNNATFFYKGAMSVLQP 194 Query: 175 YVDSGKIKVVGDQ------WVDGWLPENALKIMENALT---ANNNKIDAVVASNDATAGG 225 Y+D+GK+ V Q + GW A M+N +T A K+D +++ ND+ A G Sbjct: 195 YIDNGKLVVGSKQKDFTTIAIQGWDSAKAQARMDNLITSTYAKGTKLDVILSPNDSLAIG 254 Query: 226 AIQALSAQGL----SGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVEL 281 + AL G ++GQD D + + Q+M+++K LAN E+ + Sbjct: 255 IVAALKNAGYGTAAKPYPVLTGQDCDKPNVLAMIHDQQSMSIFKDTRTLANKVVEMVDAI 314 Query: 282 GNGQEPKAD--TTLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 G++ + + T NNG K VPS L PI +K+N K +++ G++KES+L Sbjct: 315 VQGKQAEVNDTKTYNNGSKVVPSFLCDPIYADKDNYKKILVESGYYKESDL 365 >UniRef50_Q47NL4 Solute-binding protein n=26 Tax=Actinomycetales RepID=Q47NL4_THEFY Length = 372 Score = 242 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 112/329 (34%), Positives = 179/329 (54%), Gaps = 22/329 (6%) Query: 18 NVAAHAKEVKIGMAIDDLRLERWQK-DRDIFVKKAESLG--AKVFVQSANGNEETQMSQI 74 A+ + IG+ + + + R++K DR F + L +V Q+A+ + Q +Q Sbjct: 34 AAASIDEGFTIGLLLPESKTARYEKFDRPYFEEAVAELCPKCEVSYQNADQDVSKQQAQA 93 Query: 75 ENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGE 134 E M+ G VLV+ + + ++V++AK +G+ V+AYDR+ +D+Y+SFDN+ VG Sbjct: 94 EAMLTEGASVLVLDAVDAKAAGSIVQQAKAQGVPVIAYDRLAEGG-VDYYVSFDNKTVGR 152 Query: 135 LQAKALVDIV------PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQW 188 +Q AL++ + +G ++ GSP D NA F+AG ++L G++++ + Sbjct: 153 VQGTALIEGMEKAGTAGEGQVIMINGSPTDPNAADFKAGAHEILD-----GQVEIGAEYD 207 Query: 189 VDGWLPENALKIMENALTANN-NKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDAD 247 W P+ A + ME A+TA + I V ++ND A G I AL A G+ I+GQDA+ Sbjct: 208 TPDWSPDKAQQQMEQAITAVGADNISGVYSANDGMAAGIIAALKAAGVDEMPPITGQDAE 267 Query: 248 LAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKA------DTTLNNGLKDVP 301 LAGI+RI +G Q MTVYK I A AA +AV G++ + + +P Sbjct: 268 LAGIQRIISGDQYMTVYKAIRPEAEVAAAMAVAAATGEKYEGSQEHPLTEVTDEAGNTIP 327 Query: 302 SRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 + LL PI V +NI+DTVI DGF+ E+ Sbjct: 328 AVLLEPIAVTADNIEDTVISDGFYTIEEI 356 >UniRef50_D1BVH2 Xylose ABC transporter, substrate-binding protein n=3 Tax=Actinomycetales RepID=D1BVH2_XYLCX Length = 388 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 109/341 (31%), Positives = 174/341 (51%), Gaps = 31/341 (9%) Query: 21 AHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINR 80 A A ++ +G+A+ ERW D + + E G +V +Q AN + TQ QI+ MI + Sbjct: 43 AAASDITVGVAMPTQTSERWIADGNSVREGLEEAGFEVNLQFANDDIPTQQQQIDQMITQ 102 Query: 81 GVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI-NDADIDFYISFDNEKVGELQAKA 139 G D+L++ +G L+N ++ A GI +++YDR+I + ++DFY++FDN +VG QA + Sbjct: 103 GADILIVASIDGTALANQLQAAADAGIPIISYDRLIRDTENVDFYVTFDNFQVGVDQATS 162 Query: 140 LVDIVP----QGN---------YFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGD 186 L+ + GN L GS DNNA F G M L+P++D+G + V Sbjct: 163 LLTGLGVLDADGNETGETGPFTIELFAGSLDDNNAHFFFDGAMTTLQPFIDAGTLVVGSG 222 Query: 187 QW------VDGWLPENALKIMENALTANN----NKIDAVVASNDATAGGAIQALSAQGL- 235 Q W E A + ME+ LTA+ + V++ D + G I AL G+ Sbjct: 223 QTSIDQAATLRWSQETAQRRMEDLLTAHYGGGSEPLHGVLSPFDGISRGIITALQNAGMG 282 Query: 236 ----SGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADT 291 G ++GQDA++A + I G Q T++K LLA A A +G+ P+A+ Sbjct: 283 PSIADGLPVVTGQDAEIASVALIDQGIQYSTIFKDTRLLAEQAVIAAQAFADGRTPEANN 342 Query: 292 T--LNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 T +NG+ VPS LL V ++I+ +I GF + ++ Sbjct: 343 TTDYDNGMMIVPSFLLPVSIVTADDIQSVLIDSGFFTQEQV 383 >UniRef50_A9B1C5 Solute-binding protein n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B1C5_HERA2 Length = 358 Score = 241 bits (615), Expect = 3e-62, Method: Composition-based stats. Identities = 121/343 (35%), Positives = 179/343 (52%), Gaps = 14/343 (4%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQK-DRDIFVKKAESLG--AK 57 M+ + +LL L L+ A K I + + + +R++ DR F ++ L + Sbjct: 1 MRRRFVLLVLLLVLVGCGGAEAPKAKIIALLLPEQTTKRYETVDRPWFEREMNLLCNDCQ 60 Query: 58 VFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI- 116 V +A N Q Q E I G VLV+ P + + A ++ I V+AYDR+I Sbjct: 61 VLYYNAQNNPSLQQQQAEEAIKAGARVLVLDPVDSVDARTIADHAAEQSIPVVAYDRLIL 120 Query: 117 NDADIDFYISFDNEKVGELQAKAL-----VDIVPQGNYFLMGGSPVDNNAKLFRAGQMKV 171 N + YISFDN+K+GELQA++L + L+ GS DNNA ++ G KV Sbjct: 121 NSPGVTAYISFDNQKIGELQAESLIAGLAARGLSNPKILLLHGSLSDNNASEYKRGAKKV 180 Query: 172 LKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALS 231 P V +GK+ ++G+ W P A + +E L A ++ID + A+ND TAGGA+ A+ Sbjct: 181 FDPLVAAGKLTIIGEFDTPDWKPAEAQQYVERMLAA-GDQIDGIYAANDGTAGGALVAVQ 239 Query: 232 AQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKA-- 289 A L I+GQDA+L ++RI G Q MTVYK I A AA+IA L GQ Sbjct: 240 AAKLEPLPLITGQDAELTAVQRIITGEQHMTVYKAIRPQAEAAAKIAHALMVGQPIPTNL 299 Query: 290 --DTTLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 + T+ NG+ +VP+ LL P+ V K +KDT++ D F +L Sbjct: 300 VNNRTVANGIMNVPAILLNPVVVTKATVKDTIVSDNFWSPQQL 342 >UniRef50_C7Q046 Solute-binding protein n=4 Tax=Actinomycetales RepID=C7Q046_CATAD Length = 361 Score = 240 bits (614), Expect = 3e-62, Method: Composition-based stats. Identities = 109/325 (33%), Positives = 172/325 (52%), Gaps = 20/325 (6%) Query: 18 NVAAHAKEVKIGMAIDDLRLERWQK-DRDIFVKKAESL--GAKVFVQSANGNEETQMSQI 74 V+IG+ + + + R++ D+ + + ++ G +V +A + Q +Q+ Sbjct: 41 TATGSNSSVRIGILLPESKTTRYEAFDKPLLEAELQARMPGVQVDYYNAGQDATVQQTQV 100 Query: 75 ENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGE 134 + + +G VL++ + + + V++A G+KV+AYDR+ +D Y+SFDN KVGE Sbjct: 101 DTALTKGDKVLILDAVDSKSIQASVQKAHDAGVKVVAYDRLAQG-PVDAYVSFDNVKVGE 159 Query: 135 LQAKALVDIVPQG----NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVD 190 LQ AL+ + ++ GSP D NA F+ G VL +GK+K+ + Sbjct: 160 LQGTALLAALGSNAATQQIVMINGSPTDPNAAQFKQGAHSVL-----NGKVKIGKEYDTP 214 Query: 191 GWLPENALKIMENALTANN-NKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLA 249 W P A + M A+TA I V ++ND A G ALSA L V ++GQDA L Sbjct: 215 NWDPNTANQEMAGAITALGAPNIHGVYSANDGMAAGIATALSAANL--HVPLTGQDAQLD 272 Query: 250 GIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLN----NGLKDVPSRLL 305 ++RI AGTQTMT+YKP A AA++AVE G+ P D + VPS+L+ Sbjct: 273 ALQRIQAGTQTMTIYKPYKPEATAAADVAVEFAQGRTPGNDLLPDKQTSGSGNVVPSKLI 332 Query: 306 TPIDVNKNNIKDTVIKDGFHKESEL 330 TPI V+K N+ TV+KDG + +++ Sbjct: 333 TPIVVDKTNMCTTVVKDGLYTAAQI 357 >UniRef50_P36949 D-ribose-binding protein n=274 Tax=Bacteria RepID=RBSB_BACSU Length = 305 Score = 240 bits (614), Expect = 3e-62, Method: Composition-based stats. Identities = 75/303 (24%), Positives = 136/303 (44%), Gaps = 22/303 (7%) Query: 1 MKIKNILLTLCTSLLLTNVA------------AHAKEVKIGMAIDDLRLERWQKDRDIFV 48 MK ++ + LLT + + KE IG+++ L + + Sbjct: 1 MKKAVSVILTLSLFLLTACSLEPPQWAKPSNSGNKKEFTIGLSVSTLNNPFFVSLKKGIE 60 Query: 49 KKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIK 108 K+A+ G KV + A + Q S +E++I +GVD L+I P + +S V+ A G+ Sbjct: 61 KEAKKRGMKVIIVDAQNDSSKQTSDVEDLIQQGVDALLINPTDSSAISTAVESANAVGVP 120 Query: 109 VLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVPQG-NYFLMGGSPVDNNAKLFRAG 167 V+ DR ++ ++ DN K GE+ A + D + +G + G P + + +G Sbjct: 121 VVTIDRSAEQGKVETLVASDNVKGGEMAAAFIADKLGKGAKVAELEGVPGASATRERGSG 180 Query: 168 QMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAI 227 + K++VV Q D + L +MEN L + + I AV A ND A GA+ Sbjct: 181 FHNIADQ-----KLQVVTKQSAD-FDRTKGLTVMENLLQGHPD-IQAVFAHNDEMALGAL 233 Query: 228 QALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEP 287 +A+++ G + + G D + + I + TV + L+ A E A ++ +G++ Sbjct: 234 EAINSSGKD--ILVIGFDGNKDALASIKDRKLSATVAQQPELIGKLATEAADDILHGKKV 291 Query: 288 KAD 290 + Sbjct: 292 QKT 294 >UniRef50_C7MZ66 Monosaccharide-binding protein n=1 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MZ66_SACVD Length = 376 Score = 240 bits (613), Expect = 5e-62, Method: Composition-based stats. Identities = 106/324 (32%), Positives = 171/324 (52%), Gaps = 12/324 (3%) Query: 18 NVAAHAKEVKIGMAID-DLRLERWQK-DRDIFVKKAESLGAKVFVQSANGNEETQMSQIE 75 A A K+G+ + RW+ D+ + + + G + +Q+A G+ + + + Sbjct: 39 GAQADAPLGKVGVILPETASSARWEGFDKPMLEEALRAKGFEPDIQNAQGDVQKFSTLAD 98 Query: 76 NMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGEL 135 MI +GV VL+I N ++ V +AK GI + YDR+ ++Y+SFDN +VGEL Sbjct: 99 GMIAQGVQVLIIASINSEIGGAVAAKAKSAGIPTIDYDRLNLGGSSEYYVSFDNVRVGEL 158 Query: 136 QAKALVDIVPQ---GNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGW 192 Q + L + + + G+P D+NA LF GQ VL+P DSG++++V Q +D W Sbjct: 159 QGEGLAEALDGKSGAQVIEIEGAPTDHNATLFHEGQRNVLQPLYDSGELELVRSQPIDDW 218 Query: 193 LPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIK 252 + ++ E LT+N ++D VVA+ND A I L GL+GKV ++GQDA G++ Sbjct: 219 NNQEGGRVFEQILTSNGGEVDGVVAANDGLASAVITVLKKYGLNGKVPVTGQDATAEGLR 278 Query: 253 RIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNN------GLKDVPSRLLT 306 I G Q MTV+KPI A AE+A L G + A+ + G ++V S LL Sbjct: 279 AILRGDQYMTVFKPIKEEAEATAELAAALVEGDKAAAEAVATDTLEDPKGKREVASVLLE 338 Query: 307 PIDVNKNNIKDTVIKDGFHKESEL 330 P + ++ +K V+ +G+ E+ Sbjct: 339 PYLITRDEVKR-VVDEGYVSADEI 361 >UniRef50_D2B5R3 Putative sugar ABC transporter, substrate-binding protein n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B5R3_STRRD Length = 378 Score = 239 bits (611), Expect = 8e-62, Method: Composition-based stats. Identities = 115/335 (34%), Positives = 177/335 (52%), Gaps = 21/335 (6%) Query: 11 CTSLLLTNVAAHAKEVKIGMAIDDLRLERWQK-DRDIFVKKAESLGAK--VFVQSANGNE 67 S + A + KIG+ + + R R++K DR + L K V +A + Sbjct: 35 AASASAGDTGAVDRGFKIGLLLPESRTARYEKFDRPYITEHLAELCPKCQVVYGNAGDDP 94 Query: 68 ETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISF 127 + Q Q + M+N V V+++ P + + ++ V A+ +G+KV+AYDR+ + ID Y SF Sbjct: 95 DRQRQQFDAMLNENVKVIILDPVDARAIAQSVSNARSQGVKVVAYDRLAHG-PIDAYTSF 153 Query: 128 DNEKVGELQAKALVDIVPQGN------YFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKI 181 DN +VG +Q +AL+D + G ++ GSP D NA F+ G +L +G++ Sbjct: 154 DNIQVGRMQGQALLDALKAGGDPGRGPIVMINGSPSDPNADDFKKGVHSIL-----NGQV 208 Query: 182 KVVGDQWVDGWLPENALKIMENALTANNN-KIDAVVASNDATAGGAIQALSAQGLSGKVA 240 V + GW PE A A +I V A+ND AGG A+ G+ Sbjct: 209 IVGREYDTPGWSPERAGTEAAAAFAELGAERIIGVYAANDGMAGGVALAMRNAGVRKGTP 268 Query: 241 ISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEP----KADTTLNNG 296 ++GQDA+LA I+RI GTQTMTVYKPI A AA++AV+L +G+ T++NG Sbjct: 269 LTGQDAELAAIQRILLGTQTMTVYKPIRPEAVNAAQLAVDLASGKPVTGSGSGSGTVDNG 328 Query: 297 -LKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 +P++++ P V +NIKDTV+KDGF E+ Sbjct: 329 TSSSIPAQIIQPTVVTWDNIKDTVVKDGFWTVQEI 363 >UniRef50_B0PDL3 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDL3_9FIRM Length = 373 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 113/344 (32%), Positives = 179/344 (52%), Gaps = 24/344 (6%) Query: 7 LLTLCTSLLLTNVAAHAK---------------EVKIGMAIDDLRLERWQKDRDIFVKKA 51 LL C S T+ AA A +KIG++ R++ D+ I +KA Sbjct: 32 LLAGCQSPAPTDTAASASTASLGDTQANQPEDGRIKIGVSFASEAQYRFKFDKQIMEQKA 91 Query: 52 ESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLA 111 E LGA + Q AN + Q +Q+EN+I++G+DVLV+ +G + N+V++ + +GI V+ Sbjct: 92 EELGADIIFQYANYDATKQANQVENLISQGIDVLVLNVVSGN-MVNLVEKVRSQGIPVIT 150 Query: 112 YDRMINDADIDFYISFDNEKVGELQAKALVDIVP--QGNYFLMGGSPVDNNAKLFRAGQM 169 +D + A +D + DN KVG LQ +A ++ + GN L+ G P A+ G Sbjct: 151 FDNTVEGAQVDLNVDRDNVKVGRLQLEAALEYMGPEGGNVVLVKGDPGSAVAQRISQGYE 210 Query: 170 KVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQA 229 V + + + +V DQ+ + W P+ ALK +ENAL+ANN+ I A VAS D+ A G + A Sbjct: 211 AVAAEHPE---LNIVADQFHEAWSPDKALKTVENALSANNDDIQAFVASADSVALGIVPA 267 Query: 230 LSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKA 289 + A L GK + G D +++ K I G TM+++ I E AV+LG G+E Sbjct: 268 IKAAKLDGKAFLCGMDVEISAAKLINEGVMTMSIWTDIVSGDQRTIEAAVKLGKGEEITP 327 Query: 290 DTTLNNGLKDVPSRLLTPIDVNKNNIK---DTVIKDGFHKESEL 330 D G D+P L+ + V K+N++ D + G+ E E+ Sbjct: 328 DEIQQIGGFDIPVLLVDVMPVTKDNLRQWLDEIAPAGWATEEEI 371 >UniRef50_C8WRM5 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WRM5_ALIAD Length = 321 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 65/278 (23%), Positives = 127/278 (45%), Gaps = 7/278 (2%) Query: 15 LLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQI 74 L A K +K+G A+ L + + ++A+ LG +V + + N + TQ++Q+ Sbjct: 34 LSNTGTASTKPIKLGFAVSTLNNPFFVAMSNGVQEEAKKLGVQVTILNGNNDPATQLNQV 93 Query: 75 ENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGE 134 E++I + V+ +++ P + Q LS V++A + I V+ DR + ++ +I+ ++ + G+ Sbjct: 94 EDLIQQHVNAIILNPTDSQSLSTAVEQANRAHIPVITLDRSVTKGNVACFIASNSVEAGK 153 Query: 135 LQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWL 193 + A L+ + +G + G + G + + + I+VV Q + Sbjct: 154 MAADELIKALGGKGQVVELQGVIGTSAEADREKGFDEEIGK---APGIRVVARQTA-NFD 209 Query: 194 PENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKR 253 AL +M+N L A+ N I V A ND A GA++A+ G + I G D + + Sbjct: 210 RSQALNVMQNILQAHPN-IQGVFAQNDEMALGALKAIQEAGK-HNIKIVGIDGEKEAVND 267 Query: 254 IAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADT 291 + G + + E AV+L G++ Sbjct: 268 VHKGLLYADIAQQPVQEGILGVEYAVKLVEGEKVPKQV 305 >UniRef50_C6QL47 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Geobacillus RepID=C6QL47_9BACI Length = 340 Score = 237 bits (605), Expect = 4e-61, Method: Composition-based stats. Identities = 79/320 (24%), Positives = 144/320 (45%), Gaps = 22/320 (6%) Query: 7 LLTLCTSLLLTNVAAHAK--EVKIGMAIDDLRLERWQKDRDIFVKKAE-SLGAKVFVQSA 63 +L C+ T + K ++ IG A+ D + +D + + +V A Sbjct: 36 MLVGCSGKQETAQTSGDKSGKIVIGAALPDFDDKWLSYLQDGMKEYEKTQKDVEVIYVDA 95 Query: 64 NGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD-ID 122 + Q+SQ+EN I + VD +V+IP + +V +A Q I ++ +R+ + D Sbjct: 96 MNDASKQLSQVENFIQQKVDAIVLIPVDTVSAPEMVDKANQANIPIVVVNRIFDGVDKAT 155 Query: 123 FYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKI 181 Y+ ++ K G +Q + + ++ +G +M G G +V+K Y D + Sbjct: 156 AYVGSESIKAGIMQMEEVAKLLNGKGKIAIMNGQMGHEAQIKRTEGNKQVIKKYPD---M 212 Query: 182 KVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAI 241 KVV + + W + +MEN L + KIDAVV +ND A GAI AL +G V + Sbjct: 213 KVVLEGTAE-WDRAKGMSLMENWLQS-GKKIDAVVCNNDEMAIGAIMALEDEGKLDDVIV 270 Query: 242 SGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVP 301 +G DA ++ + G +TV++ E+A++ G++ + +P Sbjct: 271 AGVDATPDALEYVKEGKLKVTVFQNAKGQGQLGLEVAIKAAKGEKVEK-------FNWIP 323 Query: 302 SRLLTPIDVNKNNIKDTVIK 321 L V K+N+++ + K Sbjct: 324 YEL-----VTKDNVEEYIKK 338 >UniRef50_D1AGX3 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AGX3_SEBTE Length = 319 Score = 237 bits (604), Expect = 5e-61, Method: Composition-based stats. Identities = 82/314 (26%), Positives = 149/314 (47%), Gaps = 16/314 (5%) Query: 3 IKNILLTLCTSLLLTN-VAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLG-AKVFV 60 + +I L C+ T K++K+G++I + D K AE G ++ Sbjct: 15 MLSIFLISCSQKGDTADGGQGGKKIKVGVSIANFDDTFLTYMMDGMKKAAEKEGDIELEF 74 Query: 61 QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIND-A 119 A + QM+Q+EN + +G DV++++P + + A G K++ +R + Sbjct: 75 VDAKEDIAKQMNQVENFVTQGKDVIIVVPVDTSAADPMTNAAVTNGTKIVYVNRNPGNLP 134 Query: 120 DIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDS 178 D +Y+ + +K G +Q + L + + +GN ++ G + G ++ K Y D Sbjct: 135 DGAYYVGSEEKKAGIMQMEYLAEKMGGKGNIVILMGKLDNEGTIKRTEGVEEIAKKYPD- 193 Query: 179 GKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGK 238 IK++ Q W + + EN L N+I+A+V++ND A GA+QAL G +G Sbjct: 194 --IKILDKQ-TGLWQRTDGMAKTENWLNKYGNEINAIVSNNDDMALGAVQALKDSGKTG- 249 Query: 239 VAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLK 298 + + G DA G+ +AAG + TV++ A E+A + NG+ +T Sbjct: 250 IFVIGVDATPDGLAALAAGDISATVFQDADGQGGGAVEVAKKAANGETVVKETW------ 303 Query: 299 DVPSRLLTPIDVNK 312 VP +L+TP ++N+ Sbjct: 304 -VPFKLVTPENINE 316 >UniRef50_A8S312 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S312_9CLOT Length = 346 Score = 236 bits (603), Expect = 7e-61, Method: Composition-based stats. Identities = 71/302 (23%), Positives = 135/302 (44%), Gaps = 18/302 (5%) Query: 22 HAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRG 81 K+ IG+A++ + +D K A+ G ++++ A + QM +EN+I + Sbjct: 62 SGKKYVIGLAMNTQTNPFFVDVKDGVQKAADEHGIELYITDAQDDPTIQMKDVENLITKK 121 Query: 82 VDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALV 141 D ++I + + + ++ + GI V DR N ++ +I +D K G + + LV Sbjct: 122 PDAIIIDTCDSDAIVSSIEACNEAGIPVFTMDREANGGEVISHIGYDAIKSGRMAGQYLV 181 Query: 142 D-IVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKI 200 D + +G + G N A+ G +V+K D+ +++V Q D + + + Sbjct: 182 DTLGGKGKIVEIQGIMGTNVAQNRSQGFNEVMK---DNPDMEIVACQVAD-FDRAKGMSV 237 Query: 201 MENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQT 260 MEN L A N +ID + A+ND GA++A+ A G + ++ G DA + + AG Sbjct: 238 MENILQA-NPEIDGLYAANDEMLLGALEAMEAAGRTDEIVKIGCDAIDDTLDAMKAGKVD 296 Query: 261 MTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTVI 320 T+ +P L A + G++ + P +L V ++ + V Sbjct: 297 ATIAEPPFFLGKAILNTAYDYLEGKQVE------------PYVILDNQLVTQDTVDSLVT 344 Query: 321 KD 322 K+ Sbjct: 345 KE 346 >UniRef50_D1BCK3 Multiple monosaccharide-binding protein n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BCK3_SANKS Length = 376 Score = 236 bits (602), Expect = 8e-61, Method: Composition-based stats. Identities = 102/344 (29%), Positives = 169/344 (49%), Gaps = 30/344 (8%) Query: 17 TNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIEN 76 + AA A +G+A+ RW +D D + E+LG +V +Q A + TQ+ Q+++ Sbjct: 32 STDAAGADGSLVGVAMPTTTSLRWIEDGDNLKAQLEALGYQVDLQYAENDVPTQVDQLQS 91 Query: 77 MINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI-NDADIDFYISFDNEKVGEL 135 MI+ G D+LV+ +G L++ + +A GI V+AYDR+I D+D+Y +FDN +VG Sbjct: 92 MIDAGADLLVVGSIDGTALTDQLAQAADAGIPVIAYDRLIRESPDVDYYATFDNFRVGTQ 151 Query: 136 QAKALVDIVP-----------QG--NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIK 182 QA +L+ + +G + GS DNNA +F G VL+PY+DSG ++ Sbjct: 152 QATSLLQGLGVLDEAGEPTGEEGPYTVEVFAGSSDDNNATVFYEGAFSVLQPYLDSGVLE 211 Query: 183 VVGDQW------VDGWLPENALKIMENALTANNNK----IDAVVASNDATAGGAIQALSA 232 V + ++ W + + M L + + ID V++ D + I L Sbjct: 212 VPSGETDFATIAIEAWDAKVGGERMTRLLDSVYSGTDLVIDGVLSPYDGISIAIIDVLKG 271 Query: 233 QGL----SGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPK 288 G + GQDA+ IK + AG Q ++YK LA + L G P+ Sbjct: 272 AGYGTAARPLPVVVGQDAEAPSIKSVIAGEQYSSIYKDTRQLAEVTVAMGDALLKGTAPE 331 Query: 289 AD--TTLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 + T+ +NG+ VP+ LL P+ V N + ++ G++ E +L Sbjct: 332 VNDVTSYDNGVTTVPTYLLAPVVVTATNYESLLVGGGYYTEEDL 375 >UniRef50_D2QJX6 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QJX6_9SPHI Length = 317 Score = 236 bits (602), Expect = 9e-61, Method: Composition-based stats. Identities = 69/310 (22%), Positives = 137/310 (44%), Gaps = 15/310 (4%) Query: 6 ILLTLCTSLLLTNVAA--HAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSA 63 +LL C + + K++ +G + ++ E D K+A+ G ++ A Sbjct: 17 LLLASCNQSGTSETSQDGEGKKLVVGATMLSMQNEFIVNVHDEMDKEAQKAGIELITVDA 76 Query: 64 NGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDF 123 + Q+ Q+E+ I + VD +++ P + S V +A I ++ + + Sbjct: 77 ERSALKQVEQVESFIAQKVDAIIMNPCEVEASSPAVAKALAAKIPIINVNSETSSKP-SA 135 Query: 124 YISFDNEKVGELQAKALVDIVP-QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIK 182 ++ D+ + + K + D + +GN +M G G ++LK Y + +K Sbjct: 136 FVGSDDVESARIAMKFIADKLGGKGNVVMMHGYMGQAAQIKREQGAREILKQYPN---LK 192 Query: 183 VVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAIS 242 ++ Q + W A+ +MEN + + ++I+AV A ND GA++AL+ GL KV + Sbjct: 193 LLAHQTGE-WDRAKAMSLMENWIQSYGSQINAVFAHNDEMGLGAVKALTDAGLKDKVIVV 251 Query: 243 GQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPS 302 DA ++ + G+ TV++ A A++ GQ +T VP Sbjct: 252 SIDAIPDALQAVKKGSLDATVFQNAEQQGAKAIATAIKAAKGQPFDKETL-------VPF 304 Query: 303 RLLTPIDVNK 312 +L+T +++K Sbjct: 305 QLVTKDNLSK 314 >UniRef50_A6L0Y3 Sensor protein n=17 Tax=Bacteroides RepID=A6L0Y3_BACV8 Length = 908 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 71/303 (23%), Positives = 130/303 (42%), Gaps = 11/303 (3%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFV 60 MK + L LC +LT+ + IG++ R + + +I + G +V + Sbjct: 1 MKKHLLFLILCLMGILTSCSQKHTRYYIGVSQCSDDEWRHKMNHEIVREALFYDGVEVEI 60 Query: 61 QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD 120 ++A N Q+ I I+R VD+L++ P ++ VV++A GI V+ DR I Sbjct: 61 RTAKDNSRNQIEDINYFIDRKVDLLIVAPNEAAAVTPVVEKAYGLGIPVVVIDRKILSDR 120 Query: 121 IDFYISFDNEKVGELQAKALVD-IVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSG 179 ++ DN ++G+ + +V+ + +G + G A G LK Sbjct: 121 YTAFVGADNCEIGKDVGQYIVNRLGGKGKILEITGLEGSTPAMERHRGLADALKA---EP 177 Query: 180 KIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKV 239 I++ WL A + M++ L +N I+ V A ND A GA + + L ++ Sbjct: 178 GIEITASVDGA-WLQSVAGEKMDSIL-QDNKGINLVFAQNDRMAVGAYLSARQRQLEKEM 235 Query: 240 AISGQDADLA---GIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNG 296 G DA G++++ G T P + ++A+++ + + DT L+ Sbjct: 236 LFVGIDALPGKGYGVEQVLEGVLDATFIYPTG--GDKVMQVAMDILEKRPYERDTKLSTA 293 Query: 297 LKD 299 L D Sbjct: 294 LVD 296 >UniRef50_A6X2R7 Periplasmic binding protein/LacI transcriptional regulator n=53 Tax=Bacteria RepID=A6X2R7_OCHA4 Length = 351 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 108/337 (32%), Positives = 170/337 (50%), Gaps = 18/337 (5%) Query: 4 KNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQ-KDRDIFVKKAESLG--AKVFV 60 K + S N A K+ +G + D R++ +D F + + + KV Sbjct: 7 KAAFAAVVLSSFAGNAQAEVKDAVVGFLMPDQASTRYEERDYPGFAAEMKKICESCKVLY 66 Query: 61 QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD 120 +A+G+ Q Q ++I++G V+V+ + +++VK A+ + IKV+AYDR I DA Sbjct: 67 LNADGDASKQQQQFNSVISQGAKVIVLDAVDTAAAASLVKLAQSQDIKVIAYDRPIPDAT 126 Query: 121 IDFYISFDNEKVGELQAKALVDIVP-------QGNYFLMGGSPVDNNAKLFRAGQMKVLK 173 DFY+SFDNE +G+ A++LV + +G + GSP D A L + G LK Sbjct: 127 SDFYVSFDNEAIGKSIAESLVKHLKDKGVAGDKGGVLQINGSPTDAAAGLIKNGIHAGLK 186 Query: 174 PYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQ 233 K + + W P A + +T N++I VVA+ND TAGGAI A+ A Sbjct: 187 D----SGYKTLAEYDTPEWAPSKAQQWASGQITRFNDQIVGVVAANDGTAGGAIAAMKAA 242 Query: 234 GLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTL 293 G+ ++G DA +A ++ I +G Q T+ KP ++A AA +A +L NG+ PKA+ TL Sbjct: 243 GIDPLPPVTGNDATIAALQLIISGDQYNTINKPSEIVAAEAARVAGQLLNGETPKAEATL 302 Query: 294 NNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 N PS+L P+ V +N+K +I L Sbjct: 303 YN----TPSKLFVPVVVTADNLKAEIIDKNIVSAETL 335 >UniRef50_Q03CA2 ABC-type sugar transport system, periplasmic component n=14 Tax=Lactobacillus RepID=Q03CA2_LACC3 Length = 319 Score = 233 bits (594), Expect = 7e-60, Method: Composition-based stats. Identities = 78/292 (26%), Positives = 132/292 (45%), Gaps = 17/292 (5%) Query: 22 HAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRG 81 K++K+G+++ L + R+ A+ V V A + Q S IE++I + Sbjct: 44 APKDLKVGVSLSTLSNPFFVSVRNGIQDLAKKNKTNVQVSDAQNDTAKQNSNIEDLIQKK 103 Query: 82 VDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALV 141 VDVL+I P + ++ VK+A GI V+ DR + + ++ ++ K G++ AK ++ Sbjct: 104 VDVLIINPVDSSAITPAVKDANDAGIPVITVDRSSDGGKVLTLVASNSTKGGQMAAKYMI 163 Query: 142 DIVPQ-GNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKI 200 + + + + G P + + G K GK+ +V Q G+ L + Sbjct: 164 EKLGKDAKIAELQGIPGASATRERGKGFDGAAK-----GKLDIVSKQTA-GFDRAKGLTV 217 Query: 201 MENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQT 260 EN L N + I + + ND A GA+QA+ A G K+ I G D + GIK + AG Sbjct: 218 TENILQGNGD-IVGIFSQNDEMALGAVQAVKAAGK--KITIVGFDGEADGIKAVKAGDMA 274 Query: 261 MTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNK 312 TV + + A + A + NG+ K + P L+T D NK Sbjct: 275 ATVAQKPEEMGRLALQAAYDHFNGKTVKKNVES-------PLSLVTTEDANK 319 >UniRef50_C1D8A9 RbsB n=14 Tax=Bacteria RepID=C1D8A9_LARHH Length = 309 Score = 233 bits (594), Expect = 8e-60, Method: Composition-based stats. Identities = 75/275 (27%), Positives = 130/275 (47%), Gaps = 7/275 (2%) Query: 16 LTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIE 75 + + IG+A+ + + ++A+ G + A + Q++ IE Sbjct: 30 APDAGTDGGKPAIGLAVSTQSNPFFVTLKKGAEEEAQKQGLTLITVDAQDDPAKQIASIE 89 Query: 76 NMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGEL 135 ++I + V V+++ P + + VK A GI V+ DR +N ++ +++ DN G++ Sbjct: 90 DLIQKKVKVILVNPTDSDAVVGAVKAANAAGIPVVTLDRSVNGGEVASHVASDNVAGGKM 149 Query: 136 QAKALVDIVP-QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLP 194 A+ L++ + QG+ + G P + A+ G V+ D +KVVG Q D + Sbjct: 150 AAEYLLEKIGNQGDVVELEGIPGASAARERGQGFHDVIDQAKD---VKVVGRQPAD-FDR 205 Query: 195 ENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRI 254 L +MEN L AN N + V A ND A GA+QAL A G+ V + G DA + + Sbjct: 206 AKGLSVMENILQANKN-VKGVFAHNDEMALGAVQALEAAGMKD-VTVVGFDATDDAVNAV 263 Query: 255 AAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKA 289 AG + TV + L+ TA + A ++ +GQ Sbjct: 264 KAGKMSATVAQKPKLIGKTAVDAAKKIIDGQPVDK 298 >UniRef50_C5VU40 D-ribose-binding protein n=4 Tax=Bacteria RepID=C5VU40_CLOBO Length = 307 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 78/301 (25%), Positives = 138/301 (45%), Gaps = 19/301 (6%) Query: 7 LLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGN 66 +L + + +N A+E KIGM + L + ++ KK++ LG ++ V + + Sbjct: 15 ILLVLGFVGCSNKHTQAREKKIGMVVSTLNNPFFVSLKEGAEKKSKELGYELLVLDSQND 74 Query: 67 EETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYIS 126 + S IE++I G+ VL++ P + + N V+ A + I V+ DR N ++ +I+ Sbjct: 75 PAKERSNIEDLIQGGISVLIVNPTDSDAVINSVQVANKANIPVITVDRQANGGEVVSHIA 134 Query: 127 FDNEKVGELQAKALVDIVPQG---NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKV 183 DN K GEL + ++D + + G P + + G ++ +K+ Sbjct: 135 SDNIKGGELASSFIIDELKNKKDIKVVELQGIPGASATRERGKGFHNIIDK---KSNLKL 191 Query: 184 VGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISG 243 + Q + L +MEN + A ++ DAV A ND A GA +AL K+ + G Sbjct: 192 ISSQ-AANFDRAQGLSVMENIIQAQSD-FDAVFAHNDEMALGAAKALKTANK--KIIVVG 247 Query: 244 QDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSR 303 D D I + TV + L+ +T+ E AV++ NGQ N K++P + Sbjct: 248 FDGDEDAKTAIEKSEISATVAQQPALMGSTSIETAVKISNGQ---------NISKNIPVK 298 Query: 304 L 304 L Sbjct: 299 L 299 >UniRef50_Q97JD5 Periplasmic sugar-binding protein n=1 Tax=Clostridium acetobutylicum RepID=Q97JD5_CLOAB Length = 319 Score = 232 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 84/324 (25%), Positives = 153/324 (47%), Gaps = 23/324 (7%) Query: 1 MKIKN--ILLTLCTSLLLTNVAAH------AKEVKIGMAIDDLRLERWQKDRDIFVKKAE 52 MK + +++ T LLT A +K+ +IG++I K + +A+ Sbjct: 1 MKKTSRILIIFAATCFLLTACAQKKSIVYKSKKYRIGLSIPASDDVFRNKIINAMENEAK 60 Query: 53 SL-GAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLA 111 +L + V +A G+ Q SQI N++ + + ++++P + + S+ + A GI +++ Sbjct: 61 NLPDTDLVVVNAKGDPARQKSQISNLVAQKCNAILVLPVDTLLSSDYTQIANDSGIPIIS 120 Query: 112 YDRMI-NDADIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQM 169 + + N D Y+ D+ G ++A+ V + +GN ++ G P A G Sbjct: 121 VNNFLKNQDDAAAYVGSDSITSGIMEAEYAVKQLNGKGNVVILKGEPNHETAIKRTEGFK 180 Query: 170 KVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQA 229 +VL+ Y + IK++ +Q+ D W ++I EN + N K DA++A+ND A GAI A Sbjct: 181 QVLQNYPE---IKIIDEQYGD-WKRTLGMQITENWI-KNGTKFDAILANNDEMAIGAIMA 235 Query: 230 LSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKA 289 L L V + G DA +K + G+ +TV++ + A + A +L G++ Sbjct: 236 LKENNLINNVFVGGIDATPDALKLLKEGSLKVTVFQNAAGQGSEAIKAAYKLVKGEKI-- 293 Query: 290 DTTLNNGLKDVPSRLLTPIDVNKN 313 N VP L+ P D +K Sbjct: 294 -----NKKIFVPYELVVPNDADKY 312 >UniRef50_Q48J93 Sugar ABC transporter, periplasmic sugar-binding protein n=4 Tax=Pseudomonas RepID=Q48J93_PSE14 Length = 308 Score = 230 bits (588), Expect = 4e-59, Method: Composition-based stats. Identities = 73/310 (23%), Positives = 136/310 (43%), Gaps = 17/310 (5%) Query: 6 ILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANG 65 LLL + A +IG+ I + R + A ++ + A G Sbjct: 3 FCKLFIAVLLLVSSQWAAASYRIGVTIARVDDNFMTYVRSGLEEAARKENVQLQFEDAQG 62 Query: 66 NEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIND---ADID 122 + Q++Q++ +++ VD ++++P + +N+ + A + + ++ +R ++ Sbjct: 63 DVVRQINQVQGFLSQKVDAVIVLPVDTSATANMTRAAVEAKMPLVYVNRHPDERVLPKGV 122 Query: 123 FYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKI 181 ++ ++ + G+LQ + L + + +G L+ G N+ G +VLK Y I Sbjct: 123 TTVASNDIEAGQLQMRYLAEKMGGKGTIALIMGDLAQNSTHDRSEGVKQVLKDYP---GI 179 Query: 182 KVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGL-SGKVA 240 +V +Q W + + N L A DA+VA+ND A GA AL G G+VA Sbjct: 180 TIV-EQQTAEWQRNKGMDLTSNWLLA-GRTFDAIVANNDEMAIGAAMALQQAGKAKGEVA 237 Query: 241 ISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDV 300 I G D G+ I G +V++ A TA + A+++ G+ A+ V Sbjct: 238 IVGIDGLPDGLAAIKRGMLAASVFQDPKAQATTALQSAIKMIKGEPVDAEVW-------V 290 Query: 301 PSRLLTPIDV 310 P +L+TP V Sbjct: 291 PFQLITPEQV 300 >UniRef50_C5EHH7 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHH7_9FIRM Length = 330 Score = 230 bits (587), Expect = 5e-59, Method: Composition-based stats. Identities = 81/316 (25%), Positives = 145/316 (45%), Gaps = 26/316 (8%) Query: 17 TNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESL-GAKVFVQSANGNEETQMSQIE 75 + A A+E+ IG + +L E + + ++ K+ + A + Q SQ++ Sbjct: 37 ADTEAAAEELVIGCTLQNLSEEFMTMLQGAMELQLKNYDNVKLIINDAESQSDKQASQLD 96 Query: 76 NMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGEL 135 + + +GVD ++I P + L++ VK GI V+ + ++ NE GE+ Sbjct: 97 SFVAQGVDAVIISPVDADALASAVKTVVDAGIPVITCSADVTGDQGQVWVGSSNENGGEI 156 Query: 136 QAKALVDIVP-QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLP 194 + K + + + +G ++ G + AG VLK Y D I++V DQ W Sbjct: 157 EMKYVAEKLGGKGKIAVLRGPLGAFAEQGRFAGYETVLKDYPD---IEIVFDQ-TGNWQR 212 Query: 195 ENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRI 254 E A+ ++EN LTA ++DA+V ND A GA++A+ A G ++ I+G DA + + I Sbjct: 213 EEAMALIENLLTA-GTELDAIVCQNDGMALGALEAVKAAGKKDQITITGIDAIVDALDSI 271 Query: 255 AAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNN 314 AG T ++ A ++AV+ G+ + D+P L V K+N Sbjct: 272 KAGELDATCFQDAIGQGTNALDMAVKAARGETVER--------MDIPFEL-----VTKDN 318 Query: 315 IKDTVIKDGFHKESEL 330 + DG++ +L Sbjct: 319 V------DGYYDRIKL 328 >UniRef50_Q98LI2 Periplasmic ribose-binding protein n=2 Tax=Proteobacteria RepID=Q98LI2_RHILO Length = 315 Score = 230 bits (587), Expect = 5e-59, Method: Composition-based stats. Identities = 83/328 (25%), Positives = 138/328 (42%), Gaps = 24/328 (7%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESL--GAKV 58 ++ + TL ++ ++KIG + + + K A + Sbjct: 8 LRTTALAATLVLGAMMPGAVLAQDKIKIGFSQGTMNHPWRVAMVEGNKKYAAEHYPDVDL 67 Query: 59 FVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIND 118 V N + Q++ +E++I +G+ VL+I P Q L+ VVKEA GIKV+ DR +N Sbjct: 68 IVTDGNNDASKQVADVESLIAQGIKVLMISPLTEQALTPVVKEAMDAGIKVVTLDRKVNT 127 Query: 119 ADIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVD 177 + ++ +N +G + L + +GN + G+ + G + + + D Sbjct: 128 -PVTVHVGGENLPLGVGAGEFLAKKLNGKGNIIELQGTAGASATIDRNKGFAEAIAKHPD 186 Query: 178 SGKIKVVGDQWVDGWLPENALKIMENALTANNN-KIDAVVASNDATAGGAIQALSAQGLS 236 +KVV Q D + + A+K ME+ + +I AV A ND A GAIQ L A G Sbjct: 187 ---MKVVASQNCD-YTRDKAVKFMEDMVQRFGPGQIQAVYAHNDEMALGAIQVLEAAGRL 242 Query: 237 GKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNG 296 +VA+ G D + + G T P +A E A ++ G+E T Sbjct: 243 NEVAVVGIDGQETAFEAVKQGKLAATFVYP--FVAPEGIETAYKVAKGEEVPETIT---- 296 Query: 297 LKDVPSRLLTPIDVNKNNIKDTVIKDGF 324 L + V +NI D +I GF Sbjct: 297 --------LPTVSVTPDNIAD-MIGKGF 315 >UniRef50_C3X7Z9 D-xylose ABC transporter n=1 Tax=Oxalobacter formigenes OXCC13 RepID=C3X7Z9_OXAFO Length = 333 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 89/311 (28%), Positives = 161/311 (51%), Gaps = 2/311 (0%) Query: 22 HAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQ-SANGNEETQMSQIENMINR 80 +A + K+G++ +RW + ++ V++A+ LG V + + +TQ +MI+ Sbjct: 20 NATKPKLGISFGVGPAKRWPVEMNLMVERAKELGMDVDARLNKTDTPKTQTEDCIDMIDN 79 Query: 81 GVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKAL 140 G+ L+++P + ++ A+++ +KVL Y R I ++DF++ +D K+G+ L Sbjct: 80 GISTLILVPRDANKTDEILDYARKKNVKVLLYARTILGKNLDFFVGYDTYKIGQSLGSHL 139 Query: 141 VDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKI 200 + +G+ ++ G D N L G MK +P V+ G + ++ D+++DGW PE A K Sbjct: 140 SEKTYKGSVAILKGDANDFNVPLLNDGAMKYFQPLVEQGDLTIILDEYIDGWNPEIARKK 199 Query: 201 MENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQT 260 + A+ NN+++DA+ A ND AG A + + G+ V I G DA+L IKR+ GTQ Sbjct: 200 LTAAIKKNNHQVDAIFAHNDIMAGVAAEVVKELGIKNHVVIVGMDAELPAIKRLVNGTQD 259 Query: 261 MTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGL-KDVPSRLLTPIDVNKNNIKDTV 319 TVY + +A TAA A L + + +N + + L+ + + NI + Sbjct: 260 ATVYMDLKAMAVTAANEAYNLATNKPTNVNAAFDNKSASTIKAYLVNGKIITRENIDRQL 319 Query: 320 IKDGFHKESEL 330 I G + E+ Sbjct: 320 IDTGVYTREEV 330 >UniRef50_C6W799 Monosaccharide-transporting ATPase n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W799_DYAFD Length = 310 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 64/291 (21%), Positives = 126/291 (43%), Gaps = 13/291 (4%) Query: 21 AHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINR 80 + + IG + ++ E D KA+ +G ++ A + Q+ Q+E+ I + Sbjct: 27 SGGDNLVIGATMLSMQNEFIVNVSDAMEAKAKEMGVELITVDAERSALKQVEQVESFIGQ 86 Query: 81 GVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKAL 140 GVD +++ P + S +K A I ++ + A ++ D+ + + K + Sbjct: 87 GVDAIIMNPAEVEASSPAIKLAMDAKIPIINVNSE-TSAKPTAFVGSDDTESARIAMKYI 145 Query: 141 VDIVP-QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALK 199 + + +GN +M G G +LK + +K++ +Q + W + Sbjct: 146 AEKLGGKGNILMMHGFMGQAAQIKRDNGAKDILKA---NPGLKLLAEQSGE-WDRAKGMS 201 Query: 200 IMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQ 259 + EN + + +KI+A+ A ND GA++AL A GL GKV + DA ++ + GT Sbjct: 202 LTENWIQSYGDKINAIFAQNDEMGMGAVKALEAAGLKGKVLVVSVDAIPDALQAVKKGTL 261 Query: 260 TMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDV 310 TV++ A E AV+ + + + +P +L+ +V Sbjct: 262 DATVFQNAKEQGGKAIETAVKAAKKEAFEKEVL-------IPFQLVDKGNV 305 >UniRef50_Q2SMT1 ABC-type sugar transport system, periplasmic component n=12 Tax=Proteobacteria RepID=Q2SMT1_HAHCH Length = 309 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 78/317 (24%), Positives = 143/317 (45%), Gaps = 17/317 (5%) Query: 3 IKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQS 62 +K + L++ S + A A ++KIG+++ R+ A+ V ++ Sbjct: 1 MKKLALSVLASAMFAGSVAAA-DLKIGVSMAVFDDNFLTALRNGIETAAKDKSVDVQIED 59 Query: 63 ANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIND---- 118 TQ++QI+N I GVD +++ P + ++ +A+ GI ++ +R + Sbjct: 60 GKNEVGTQLNQIQNFIASGVDAIIVNPVDTDATVSISSDAEAAGIPLIYVNRQPINVNQL 119 Query: 119 ADIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVD 177 D +++ + E G LQ + + ++ +GN +M G + A V+K + Sbjct: 120 PDNQAFVASNEEVSGTLQTEEVCRLLGGKGNVVVMMGELSNQAAIQRTKDIHDVIKRK-E 178 Query: 178 SGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS- 236 +KVV +Q + W +M N L+A + DAV+++ND A GAIQAL A G Sbjct: 179 CSGMKVVAEQTAE-WSRLKGNDLMTNWLSA-GLEFDAVISNNDEMAIGAIQALKASGRKM 236 Query: 237 GKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNG 296 V ++G DA + + +G +TV++ A + AV L G+ Sbjct: 237 DSVVVAGIDATPDALAAMKSGDLDVTVFQSAKGQGAGAVDAAVRLAKGENVDQKVW---- 292 Query: 297 LKDVPSRLLTPIDVNKN 313 VP L+TP +++K Sbjct: 293 ---VPFELVTPANLDKY 306 >UniRef50_A8GD74 Periplasmic binding protein/LacI transcriptional regulator n=19 Tax=Enterobacteriaceae RepID=A8GD74_SERP5 Length = 309 Score = 227 bits (579), Expect = 4e-58, Method: Composition-based stats. Identities = 73/321 (22%), Positives = 144/321 (44%), Gaps = 23/321 (7%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLG-AKVF 59 MK+K +++T +L + AK++KIG+++ R K + G Sbjct: 1 MKLKKLIVTSVLMCMLPA-SVLAKDIKIGVSMAYFDDNFLTILRQSMQSKMKQDGNVSGQ 59 Query: 60 VQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIND- 118 + A G+ Q+ QIEN +++GVD +++ P + Q + ++K A+ I ++ +R Sbjct: 60 FEDAKGDIAQQIQQIENFVSQGVDAIILNPVDTQGVKPMIKLAESAKIPLVFVNRRPEVT 119 Query: 119 -ADIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYV 176 Y+ D++ G+LQ + L ++ +GN ++ G + + G +V Y Sbjct: 120 LPAGMAYVGSDSKLAGKLQMEELAKLMNGKGNVMILMGELSNEATRDRTRGVEEVAAKYP 179 Query: 177 DSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS 236 IK++ Q W + A+ I + +IDA+ ++ND A GAI AL S Sbjct: 180 ---GIKILDKQTAK-WGRKEAVDITTDWAL-TGQQIDAIASNNDEMAIGAILALKQAKKS 234 Query: 237 GKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNG 296 G V ++G D ++ I G ++V++ A + A++L G++ +++ Sbjct: 235 G-VLVAGVDGTPDALEYIKKGDLALSVFQDAKGQGEGAVQTAIQLVKGEKVESN------ 287 Query: 297 LKDVPSRLLTPIDVNKNNIKD 317 L+ + K N ++ Sbjct: 288 ------VLIPYQLITKANYQE 302 >UniRef50_A5F1B8 Ribose ABC transporter, periplasmic D-ribose-binding protein n=31 Tax=Vibrio RepID=A5F1B8_VIBC3 Length = 294 Score = 226 bits (576), Expect = 9e-58, Method: Composition-based stats. Identities = 75/291 (25%), Positives = 136/291 (46%), Gaps = 10/291 (3%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAK-EVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVF 59 M++K + + +LL T+V+ A+ + + + + L + +D KA+ LG + Sbjct: 1 MRMKKLTTLISAALLSTSVSFVAQAQDTVAIVLSTLNNPFFVTMKDGAEAKAKELGYNLI 60 Query: 60 VQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDA 119 V + + ++S +E++ RGV ++I P + +SN ++ A + I VL DR + Sbjct: 61 VLDSQNDPSKELSNVEDLTVRGVKAILINPTDSDAVSNAIRIANRSKIPVLTLDRGASRG 120 Query: 120 DIDFYISFDNEKVGELQAKAL-VDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDS 178 ++ +I+ DN GE+ + I + G + A+ G M +K Sbjct: 121 EVVSHIASDNVVGGEMAGHFIEAKIGSDAKVIQLEGIAGTSAARERGEGFMNAVK----G 176 Query: 179 GKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGK 238 K++++ Q D + L +MEN L AN + + AV A ND A GA++A+ A G S Sbjct: 177 SKMQLLASQPAD-FDRTKGLNVMENLLAANPD-VQAVFAQNDEMALGALRAIQASGKS-- 232 Query: 239 VAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKA 289 V I G D GI + G TV + ++ E A ++ G++ +A Sbjct: 233 VMIVGFDGTDDGIAAVERGQLAATVAQQPDMIGAIGIETADKMLKGEKVEA 283 >UniRef50_B8I2K0 Periplasmic binding protein/LacI transcriptional regulator n=3 Tax=Clostridium RepID=B8I2K0_CLOCE Length = 333 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 79/297 (26%), Positives = 139/297 (46%), Gaps = 20/297 (6%) Query: 22 HAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRG 81 K++ +GM + L+ E + + KKA LG ++ + N + TQ++Q+E MI+ G Sbjct: 50 ADKKIVVGMTLYSLKNEFTVRLSNAAKKKAAELGVELKIYDGNYDPNTQINQVETMISDG 109 Query: 82 VDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALV 141 VD +++ P + + + V +A I V+ + ++ + Y+ + GEL+ +A+ Sbjct: 110 VDAIILNPQDAKACAVAVDKAAAANIPVIGVNTRVDSEKLTSYVGSKDVYAGELEMQAIA 169 Query: 142 DIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKI 200 D + +GN ++ G + G VLK Y D IKV+ ++ W A+ + Sbjct: 170 DKIGGKGNIVILDGPLGQSAQLERSEGIQNVLKKYPD---IKVLAEKTA-NWSRSEAMTV 225 Query: 201 MENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQT 260 MEN L A +KIDAVVA ND A GA +A+ A+ L + G D + + GT Sbjct: 226 MENWLQAF-DKIDAVVAENDEMALGARKAIEAKKLD--IPTIGVDGITDALDAVEKGTLI 282 Query: 261 MTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKD 317 T+++ + A EIAV G+ + ++ V K+N+ + Sbjct: 283 ATIFQDGAGQGSKALEIAVAKAKGENVDKEYWIDF------------EPVTKDNVAE 327 >UniRef50_C0CY30 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CY30_9CLOT Length = 392 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 98/331 (29%), Positives = 167/331 (50%), Gaps = 21/331 (6%) Query: 21 AHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINR 80 A +K IG+++ ERW +D + + + G +V +Q A+ E Q+ QIENMI + Sbjct: 58 AVSKGDMIGVSLTSRSAERWLRDGNTLNEDLTAAGYQVDLQYADSKPEMQVQQIENMILK 117 Query: 81 GVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYD-RMINDADIDFYISFDNEKVGELQAKA 139 G VL++ P + LS+V+ AK+ GI V+ YD ++ +DID+++ FDN KVG +QA+A Sbjct: 118 GCKVLIVAPVDNSALSSVLATAKENGIVVINYDLGIVGSSDIDYFVGFDNSKVGTMQAEA 177 Query: 140 LVDIVP--QGN-----YFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQ----- 187 +++ + +G L+ GS + N ++ G M+ KPY+D+GK+ V Q Sbjct: 178 IIEKLGLDKGEEGPFYIELVAGSLAEANCYMYFEGAMEAFKPYMDAGKLVVKSGQTSIEQ 237 Query: 188 -WVDGWLPENALKIMENALTANNNK---IDAVVASNDATAGGAIQALSAQGLS----GKV 239 V W E ++N LT + +DAV++ +D +G L + G Sbjct: 238 CTVVDWKLELLTARLDNLLTTYYSDGTLLDAVLSPSDYLSGPIATRLESFGYGSADMPMP 297 Query: 240 AISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKD 299 I+G DA + K IA M+V+K LL+ +I L G+EP+ + + Sbjct: 298 VITGNDATESVCKMIATDEVYMSVFKDTRLLSGACLDIINALAEGREPEVTDVYTPDVYE 357 Query: 300 VPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 +P+ + + K N+K+ V+ G E ++ Sbjct: 358 IPTIFVPMESITKENLKEVVVDSGIFTEEQI 388 >UniRef50_C5VG88 Sensor protein n=2 Tax=Prevotella RepID=C5VG88_9BACT Length = 878 Score = 224 bits (571), Expect = 3e-57, Method: Composition-based stats. Identities = 77/319 (24%), Positives = 137/319 (42%), Gaps = 24/319 (7%) Query: 1 MKIKNILLTLCTSLLLTNVA-AHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVF 59 M++K L L +LL + + + K+ IG++ + R + + ++ + + + Sbjct: 1 MQMKQWLYILIFTLLFSACSDNNVKKYVIGVSQCSEDIWRDKLNNELVMSTYQHDNVTLK 60 Query: 60 VQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDA 119 SAN N+ Q QIE I GV++L++ P +S+V+ +A GI V+ +DR + Sbjct: 61 FASANDNDRLQKQQIEQFIKEGVNLLIVSPNQIHTISSVIDKAYDAGIPVILFDRKTDSK 120 Query: 120 DIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDS 178 +I DN + G + + +GN + G + A G M LK Y Sbjct: 121 KYTAFIGADNYEAGYEIGNFIGQQLDGKGNIAEICGLQASSPAIERNRGFMDALKDY--- 177 Query: 179 GKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGK 238 IKV+ + D W+ E+ + M++ L+ I V A ND A GA+Q++ + G Sbjct: 178 SGIKVIARKHGD-WVKESGVMAMDSVLSQAKEPIQYVFAQNDRMALGALQSIKKHKVKG- 235 Query: 239 VAISGQDADL---AGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNN 295 + I G DA G++ + G + P ++ ++A+ + + K D L Sbjct: 236 IRIVGIDALPVPGGGMENVRDGNLEASYIYPTR--GDSVMQLALNILEKKPYKRDNYLKG 293 Query: 296 GLKDVPSRLLTPIDVNKNN 314 L V K N Sbjct: 294 AL------------VTKAN 300 >UniRef50_C7M0I9 Solute-binding protein n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M0I9_ACIFD Length = 404 Score = 224 bits (571), Expect = 4e-57, Method: Composition-based stats. Identities = 114/337 (33%), Positives = 169/337 (50%), Gaps = 18/337 (5%) Query: 10 LCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQK-DRDIFVKKAESLGAK---VFVQSANG 65 L+++AA K + + D + R+ + D K + G K V++A G Sbjct: 54 FTAMSSLSSLAAKGKGLVAAILPDTVSSARYTEFDAPFLTKAFQLAGLKSNQYIVENAQG 113 Query: 66 NEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRM-INDADIDFY 124 ++ T++S ++ I+RG V++ P + V + K A Q G++V+ YDR+ + + D+Y Sbjct: 114 SDATELSMAQSAISRGASVIIFDPLDSGVGVEIEKYAAQHGVRVINYDRLTLGSSPSDYY 173 Query: 125 ISFDNEKVGELQAKALVD-----IVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSG 179 +SF+N +VG+L + V V N +M G+P DNNA LF G V+ PY SG Sbjct: 174 VSFNNVRVGQLIGQGFVACVAAWHVTHPNVLVMRGAPTDNNATLFAEGYDSVIDPYFKSG 233 Query: 180 KIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGK- 238 K +VG W P AL + TA+ N I+AVV ND A I L + ++ K Sbjct: 234 KWTLVG-TPPGTWTPSVALTEFQQMYTAHPN-INAVVTPNDENAAPIISYLQSLHIAPKT 291 Query: 239 VAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKA-----DTTL 293 + +GQDA L G++ I AG Q TVYKPI A A +A+ L G+ P A T Sbjct: 292 IPFTGQDATLQGLQNILAGYQCGTVYKPIYQEAQAAVSLALYLRAGKTPPAALLNGTTHD 351 Query: 294 NNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 ++PS LLTP V N+ TVI D F S+L Sbjct: 352 PVSGNNIPSVLLTPEWVTTKNMASTVIADNFVPASQL 388 >UniRef50_C7M5H3 Sensor protein n=1 Tax=Capnocytophaga ochracea DSM 7271 RepID=C7M5H3_CAPOD Length = 934 Score = 223 bits (569), Expect = 6e-57, Method: Composition-based stats. Identities = 70/320 (21%), Positives = 131/320 (40%), Gaps = 27/320 (8%) Query: 2 KIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAE--SLGAKVF 59 K + L L IG++ L R Q + ++ ++ Sbjct: 14 KYHILFLYFALFACLACQRERNPRYVIGVSQCSEDLWR-QTMNEELKREVALYQANTELL 72 Query: 60 VQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDA 119 ++S + Q++ IE I + VDVLV+ P + + V+++A Q+GI V+ DR I Sbjct: 73 IRSVKDDTPKQIADIEWFIEQKVDVLVVSPNESEACTPVIEKAYQQGIPVILVDRKIATE 132 Query: 120 DIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDS 178 Y+ +N ++G+ + I+ +GN + G+ + G + L ++ Sbjct: 133 SYTAYVGANNYQIGKEAGHYAIGILKGKGNIAEVRGTKGSTSDAERHKGFVDALN---NA 189 Query: 179 GKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGK 238 ++++V + W +L +A M+ + N ID V A ND A G +A +GK Sbjct: 190 PEVRIVAETW-GNFLKADAKVQMQQLFQQHPN-IDLVFAMNDPMAAGTHEAAMQ--FNGK 245 Query: 239 VA-ISGQDA-DLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNG 296 + I G DA GI I Q + P ++A+++ + Q + + LN Sbjct: 246 IPFIIGVDALQQEGISNIENNVQDASFIYPTG--GEKVIDLAMKILHKQPFERENILNTA 303 Query: 297 LKDVPSRLLTPIDVNKNNIK 316 V+K+N++ Sbjct: 304 ------------VVDKSNVR 311 >UniRef50_UPI000185D1D6 putative DNA-binding response regulator/sensor histidine kinase n=1 Tax=Capnocytophaga sputigena ATCC 33612 RepID=UPI000185D1D6 Length = 903 Score = 223 bits (569), Expect = 7e-57, Method: Composition-based stats. Identities = 71/320 (22%), Positives = 133/320 (41%), Gaps = 27/320 (8%) Query: 2 KIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAE--SLGAKVF 59 + + L L IG++ L R Q + ++ A+V Sbjct: 5 RYHILFLYFALFACLACQRERNPRYVIGVSQCSEDLWR-QTMNEELKREVALYQADAEVL 63 Query: 60 VQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDA 119 ++S + Q++ IE I + VDVLV+ P + + V+++A Q+GI V+ DR I Sbjct: 64 IRSVKDDTPKQIADIEWFIEQKVDVLVVSPNESEACTPVIEKAYQQGIPVILVDRKIATE 123 Query: 120 DIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDS 178 Y+ +N ++G+ + ++ +GN + G+ + G + LK ++ Sbjct: 124 SYTAYVGANNYQIGKEAGLYAIGVLKGKGNIAEVRGTKGSTSDAERHKGFVDALK---NA 180 Query: 179 GKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGK 238 ++++V + W +L +A M+ + ID V A ND A G +A +GK Sbjct: 181 PEVQIVAETW-GNFLQADAKTQMQQIFQEH-PHIDLVFAMNDPMAAGTHEAAMQ--FNGK 236 Query: 239 VA-ISGQDA-DLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNG 296 + I G DA GI+ I Q + P E+A+++ + Q + + LN Sbjct: 237 IPFIIGVDALQQVGIQNIENSVQDASFIYPTG--GEKVIELAMKILHKQPFQRENILNT- 293 Query: 297 LKDVPSRLLTPIDVNKNNIK 316 V+K+N++ Sbjct: 294 -----------TVVDKSNVR 302 >UniRef50_B8HEQ4 Multiple sugar-binding periplasmic receptor n=8 Tax=Micrococcineae RepID=B8HEQ4_ARTCA Length = 365 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 105/312 (33%), Positives = 161/312 (51%), Gaps = 18/312 (5%) Query: 28 IGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVI 87 IG+A+ E W +F G K VQ ANG Q +QI M+ +G V+++ Sbjct: 47 IGVALPQKTSENWVLAEKLFNDGLNGAGFKADVQFANGGVSEQQNQISAMVTKGAKVIIV 106 Query: 88 IPYNGQVLSNVVKEAKQEGIKVLAYDR-MINDADIDFYISFDNEKVGELQAKALVDIVPQ 146 +G L +K+AK G ++AYDR ++N ++D+Y+++DN KVGELQ +AL+D + Sbjct: 107 GAIDGSQLGTQLKQAKDAGATIIAYDRLLLNTENVDYYVAYDNFKVGELQGQALLDGLKA 166 Query: 147 G------NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQW------VDGWLP 194 N L GSP D NAK+F G M VLKP +D G +KV+ Q GW Sbjct: 167 KKPNGPYNIELFAGSPDDANAKVFFDGAMSVLKPKIDDGTLKVLSGQTNFEQAVTQGWKA 226 Query: 195 ENALKIMENALTANNN--KIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIK 252 ENA + + LT + + +D V++ ND A + ++ A G ++GQD+++ +K Sbjct: 227 ENAQRRADTLLTGSYSSASLDGVLSPNDTLARAVLTSVKAAGK-PLPVVTGQDSEVESVK 285 Query: 253 RIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTT--LNNGLKDVPSRLLTPIDV 310 I AG Q T+ K L A + +L G++ + + NNG+K VP+ LL P+ V Sbjct: 286 SIMAGEQYSTINKDTRKLVEHAITMVKDLQAGKDLEINDKDSYNNGVKTVPAYLLEPVIV 345 Query: 311 NKNNIKDTVIKD 322 N+K D Sbjct: 346 TAANVKTAYTDD 357 >UniRef50_Q7MEU9 ABC-type sugar transport system, periplasmic component n=13 Tax=Bacteria RepID=Q7MEU9_VIBVY Length = 292 Score = 222 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 74/308 (24%), Positives = 138/308 (44%), Gaps = 17/308 (5%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFV 60 MK L++ ++ A A++ + + + L + +D +A+ LG + V Sbjct: 1 MKKLATLISAALLTSTVSLGAQAQD-TMAIVVSTLNNPFFVTMKDGAETRAKELGYNLIV 59 Query: 61 QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD 120 + + ++S +E++ RGV ++I P + +SN ++ A + I VL DR + D Sbjct: 60 LDSQNDPSKELSNVEDLTIRGVKAILINPTDSDAVSNAIRIANRSKIPVLTLDRGASRGD 119 Query: 121 IDFYISFDNEKVGELQAKALVDIVP-QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSG 179 + +I+ DN GE+ +V+ V + + G + A+ G M +K Sbjct: 120 VVSHIASDNVVGGEMAGNFIVEKVGEKAKVIQLEGIAGTSAARERGEGFMNAVK----GS 175 Query: 180 KIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKV 239 ++++ Q D + L +MEN L AN + + AV A ND A GA++A+ A G +V Sbjct: 176 HMELLASQPAD-FDRTKGLNVMENLLAANPD-VQAVFAQNDEMALGALRAIQASGK--EV 231 Query: 240 AISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKD 299 I G D GI + G T+ + L+ E A ++ G++ + Sbjct: 232 MIVGFDGTDDGIAAVNRGKLAATIAQQPDLIGALGIETADKVLKGEQVED-------YIP 284 Query: 300 VPSRLLTP 307 VP +++T Sbjct: 285 VPLKVVTK 292 >UniRef50_B1KZY7 D-ribose-binding protein n=3 Tax=Clostridium botulinum RepID=B1KZY7_CLOBM Length = 336 Score = 220 bits (561), Expect = 5e-56, Method: Composition-based stats. Identities = 77/344 (22%), Positives = 141/344 (40%), Gaps = 44/344 (12%) Query: 1 MKIKNILLTLCTSLLLTNVA----------------AHAKEVKIGMAIDDLRLERWQKDR 44 MK +L + S LL A KEV +G+++ L + Sbjct: 1 MKKTKKILAVLLSTLLIGSAILTGCGSKESSVDKKDKDPKEVTVGLSLSSLSNAFFIGME 60 Query: 45 DIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQ 104 K +G K+ +ANG+ Q+S IE++I + VD+L++ + + VK+AK+ Sbjct: 61 KGVKDKTSEIGCKLIETNANGDIAKQLSDIEDLITKKVDILIVNALDADAIVPAVKKAKE 120 Query: 105 EGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVPQ-----GNYFLMGGSPVDN 159 I ++ DR N D+ ++ DN K+GE A+ ++ + GN + G + Sbjct: 121 ANIPIIFLDRGANSEDMTTFLETDNVKMGEQAAELILKALKDKGLNGGNVVEIEGLQGTS 180 Query: 160 NAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASN 219 A+ G V+ + + +K+V Q + E ++ +M+N L A N KIDAV N Sbjct: 181 AARDRGKGFHNVMDKHKE---VKIVAKQ-AGDFNQEKSMNVMQNILQA-NPKIDAVFGHN 235 Query: 220 DATAGGAIQAL------SAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANT 273 D GA +A+ G + + G D I+ + G +++ + + Sbjct: 236 DDCTVGAEKAIIASNRMKPAGDKEHIFVVGIDGINQAIESVKKGNIDVSISQDPIGMGVQ 295 Query: 274 AAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKD 317 A E+ ++ G++ + + K+N D Sbjct: 296 AVEVGLKAIKGEQVEKHIYTKF------------FPITKDNATD 327 >UniRef50_B1Y1T3 ABC sugar transporter, periplasmic solute-binding protein n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y1T3_LEPCP Length = 355 Score = 220 bits (560), Expect = 7e-56, Method: Composition-based stats. Identities = 95/343 (27%), Positives = 164/343 (47%), Gaps = 15/343 (4%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQ-KDRDIFVKKAESLG--AK 57 MK ++IL L S+L + + E K+ + + R++ +D F+ + AK Sbjct: 1 MK-QHILGALAASILASTATSAMAEDKVFFLLPNATTIRFESRDAPFFIDALKKKAPQAK 59 Query: 58 VFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIN 117 V VQ+A G+ Q +E+ I++G V+V + + + + A + V+ YD Sbjct: 60 VIVQNAQGDPSRQQRLVEDAISQGAKVIVYTSADANLSAGSLAAAAAAKVPVVLYDHDAV 119 Query: 118 DADIDFYISFDNEKVGELQAKALVDIVPQGN-----YFLMGGSPVDNNAKLFRAGQMKVL 172 D ++ FD+ VG+ Q K +++ + N + G+ + + AGQ + L Sbjct: 120 GGKADAHVVFDSLSVGQAQGKRAAELISKINKPVVKVARIKGNQGEYGTGQYEAGQNEFL 179 Query: 173 KPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSA 232 KP + SGK+KVV +Q+ + W P A E+ LT N +D + ND T GG++ AL + Sbjct: 180 KPLIASGKVKVVCEQYTENWDPVKAQSFAEDCLTRNKGDVDVFLGMNDGTTGGSVAALIS 239 Query: 233 QGLSG--KVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKA- 289 QG K+ GQDA + ++ IA G Q +V K + + A AA++ L G+ Sbjct: 240 QGYKPGQKLVTGGQDATVEALRYIAMGWQDNSVLKDLKVEATYAADVVASLLGGKGVPKN 299 Query: 290 --DTTLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 + +NN DVP+ L ++ N+ D V+K G ++ Sbjct: 300 LINGKVNNKFMDVPAVFLPVSNITAANLSD-VVKAGVWTWPQI 341 >UniRef50_D2QME7 Two component transcriptional regulator, AraC family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QME7_9SPHI Length = 940 Score = 219 bits (559), Expect = 9e-56, Method: Composition-based stats. Identities = 65/291 (22%), Positives = 120/291 (41%), Gaps = 12/291 (4%) Query: 14 LLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAE-SLGAKVFVQSANGNEETQMS 72 + A K +IG + E + ++ + + A + Q+S Sbjct: 38 MAGCQSATKTKTYRIGFSQCTGGDEWRKTMLHDMKRELTFHPNYTLLYEDAENSTTRQIS 97 Query: 73 QIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKV 132 QI+ +I++G+D+L++ P + V+++ + GI V+ DR I + YI DN ++ Sbjct: 98 QIQALIDQGIDLLIVSPNEVAPFAKVIEDVFKRGIPVILLDRKIETESYNAYIGGDNVEI 157 Query: 133 GELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDG 191 G L + + + +G + G P + A+ G ++ L+ Y +K + Q Sbjct: 158 GRLAGVFIGNHLKGKGRIVEIWGLPSSSPAQERHRGLLEELRKYPGIQVVKELNGQ---- 213 Query: 192 WLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADL--- 248 W + +++ L + +D V A ND A GA +G+ K+ G DA Sbjct: 214 WERDTVGRVVAAELNTLKD-VDLVFAHNDVMALGAYAVCKQKGIEKKLDFVGIDALPGPN 272 Query: 249 AGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKD 299 AG++ I G + P A E A + G+ K + LN+ D Sbjct: 273 AGMQAITDGILKASFLYPTG--GEEAIETATRILAGKSVKREQVLNSIQID 321 >UniRef50_Q9KAG4 Sugar ABC transporter (Sugar-binding protein) n=1 Tax=Bacillus halodurans RepID=Q9KAG4_BACHD Length = 323 Score = 219 bits (559), Expect = 9e-56, Method: Composition-based stats. Identities = 78/323 (24%), Positives = 152/323 (47%), Gaps = 23/323 (7%) Query: 3 IKNILLTLCTSLLLTNVAAHAK------EVKIGMAIDDLRLERWQKDRDIFVKKAESL-G 55 + ++LL C S T+ + + + IG++I +L E +D ++A + Sbjct: 14 LMSLLLAACGSGGETSGDGNGESTGDSGQKVIGVSISNLD-EFLTYMQDAMKEEAANYPD 72 Query: 56 AKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRM 115 + A + QM+Q+EN I+R VD +++ P + ++V GI ++ +R Sbjct: 73 FEFIFSDAQNDSTQQMAQVENFISRNVDAIIVNPVDTTSAVDIVNMVNDAGIPIIIANRT 132 Query: 116 INDAD-IDFYISFDNEKVGELQAKALVDIVP-QGNYFLMGGSPVDNNAKLFRAGQMKVLK 173 + D ++ ++ + G LQ + + ++ +GN +M G + G ++++ Sbjct: 133 FDGVDQATAFVGSESIQSGLLQMEEVAKLLNNEGNIAIMDGELGHEAQIMRTEGNKQIIE 192 Query: 174 PYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQ 233 + ++VV Q + +++MEN L + +IDAVVA+ND A GAI AL A Sbjct: 193 EH---DGLEVVL-QGTAKFDRSEGMRLMENWLNS-GTEIDAVVANNDEMALGAILALEAV 247 Query: 234 GLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTL 293 G V ++G DA A ++ + G +TV++ T+ ++AV+ NG++ + Sbjct: 248 GKLDDVIVAGIDATPAALEAMKEGKLDVTVFQDAKGQGATSVKVAVQAANGEDVED---- 303 Query: 294 NNGLKDVPSRLLTPIDVNKNNIK 316 +P L+TP +V + K Sbjct: 304 ----AMIPYELVTPENVEEYEAK 322 >UniRef50_A8GD77 Periplasmic binding protein/LacI transcriptional regulator n=11 Tax=Proteobacteria RepID=A8GD77_SERP5 Length = 305 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 82/318 (25%), Positives = 142/318 (44%), Gaps = 21/318 (6%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFV 60 MK ++ + T+V A IG+++ R K+A++ G V Sbjct: 1 MKYLKRIVLVAALGCSTSVLAE----TIGVSMAYFDQNFLTIIRHSIDKEAKARGISVQF 56 Query: 61 QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD 120 + A G+ Q Q++N I+ GVD +++ P N + K + GI ++ +R D+ Sbjct: 57 EDARGDVGRQADQVQNFISAGVDAIIVDPVNSAGTPAITKMVTKAGIPLVYVNRTPGDSK 116 Query: 121 IDF---YISFDNEKVGELQAKALVDIVP-QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYV 176 + ++ D ++ G LQ + L + QGN +M G+ D A +V+ Y Sbjct: 117 LPAGVVFVGSDEKQSGTLQMEELARLANYQGNVAVMIGNLTDAGALQRTKDVEQVVAKYP 176 Query: 177 DSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS 236 K+KVV Q + + +M N +T N ID V A+ND A GAI AL G Sbjct: 177 ---KMKVVQKQSA-NYSRSEGMDLMLNWIT-NGESIDIVAANNDEMAIGAIMALQQAGKQ 231 Query: 237 G-KVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNN 295 G KV + G DA G+K +++G +TV++ + ++A + G++ + Sbjct: 232 GSKVLVGGIDATPDGLKALSSGKMQVTVFQDAVGQGKASVDVAQRMIKGEKL-------D 284 Query: 296 GLKDVPSRLLTPIDVNKN 313 +P L+TP ++ K Sbjct: 285 PYYWIPFELVTPANMQKY 302 >UniRef50_A8L0L2 Solute-binding protein n=5 Tax=Bacteria RepID=A8L0L2_FRASN Length = 385 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 108/321 (33%), Positives = 178/321 (55%), Gaps = 15/321 (4%) Query: 20 AAHAKEVKIGMAIDDLRLERWQ-KDRDIFVKKAESLG--AKVFVQSANGNEETQMSQIEN 76 ++ I + + + + R++ DR F + + KV +A+ + Q +Q E Sbjct: 55 QGGSESGTIALLLPETQTTRYESADRPYFEARMAKICPDCKVLYSNADQDSAAQQNQAEQ 114 Query: 77 MINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQ 136 + G VLV+ P +G+ + + + A+ G++V++YDR+I A +D YISFDNEKVG+LQ Sbjct: 115 AMTNGAKVLVLDPVDGEAAAVIARNARDRGVRVVSYDRLIQKAPVDAYISFDNEKVGQLQ 174 Query: 137 AKALVDIVPQ----GNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGW 192 +AL+D + G ++ GS D NA+ F+ G + VL+ GK+ + D + W Sbjct: 175 GQALLDAIGDRAGAGKVIMINGSQDDPNAQQFKDGALSVLE-----GKVTIGFDTFTPDW 229 Query: 193 LPENALKIMENALTANN-NKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGI 251 P+ A + M+ A+T I V A+ND AG + AL ++ ++GQDA+LAG+ Sbjct: 230 SPDTAGREMDQAITTVGRENIVGVYAANDGMAGAVVAALRRANVNPLPPVTGQDAELAGV 289 Query: 252 KRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPK--ADTTLNNGLKDVPSRLLTPID 309 +R+ AG Q MTVYK I A AA++A+ L G+ A ++NG VP+ LL P+ Sbjct: 290 QRVLAGDQHMTVYKAIRPEAEQAADLALALLRGEPVDTIATGHVDNGNGQVPAVLLEPVA 349 Query: 310 VNKNNIKDTVIKDGFHKESEL 330 V ++ + TV+KDGF +++L Sbjct: 350 VTRDTVAATVVKDGFIAKADL 370 >UniRef50_Q0SSJ2 Ribose ABC transporter, ribose-binding protein n=10 Tax=Clostridium RepID=Q0SSJ2_CLOPS Length = 301 Score = 219 bits (557), Expect = 1e-55, Method: Composition-based stats. Identities = 72/297 (24%), Positives = 126/297 (42%), Gaps = 11/297 (3%) Query: 2 KIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQ 61 KI ++ L L + + KIGM + L + +D K+AE LG + V Sbjct: 6 KIFSVGLMLMMLMTSFIGCGRDNKPKIGMVLSTLNNPFFVNMKDGAEKEAEKLGYDLVVL 65 Query: 62 SANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADI 121 + + + + +E++I GV L+I P + + V+ A + I V+ DR N I Sbjct: 66 DSQNDPAKERANVEDLIQLGVIALLINPTDSDAVVKTVEVANKSNIPVITLDRQANGGKI 125 Query: 122 DFYISFDNEKVGELQAKALVDIVPQG----NYFLMGGSPVDNNAKLFRAGQMKVLKPYVD 177 +I+ DN K GE+ A+ ++D N + G P + + G ++ Sbjct: 126 TSHIASDNIKGGEMAAEYVLDKFKDEKGPINVVEIQGIPGASATRDRGEGFHNIMDKNDK 185 Query: 178 SGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSG 237 I + + + L++MEN + AN N I V A ND A GA++A+ A G++ Sbjct: 186 FNFISI----QAADFDRQKGLQVMENIIQANPN-IQVVFAHNDEMALGAVKAIKASGINA 240 Query: 238 KVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLN 294 + G D + I A T + + L+ E+A ++ G+ K + Sbjct: 241 --LVIGFDGNDDAKDSIDANEMTAIIAQQPDLIGALGVELANKIYKGESIKNKIAAD 295 >UniRef50_B3DR21 ABC-type xylose transport system periplasmic component n=8 Tax=Bifidobacteriaceae RepID=B3DR21_BIFLD Length = 385 Score = 218 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 112/379 (29%), Positives = 173/379 (45%), Gaps = 52/379 (13%) Query: 1 MKIKNILLTLCTSLLLTNVAAH----------------AKEVKIGMAIDDLRLERWQKDR 44 MK ++ + + + A K IG+++ ERW KD Sbjct: 1 MKFTKKIVAVVAGVAMCAGLAACGGSRSGQATGGDAKIEKGATIGISMPTKSEERWNKDG 60 Query: 45 DIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQ 104 + K E G KV + A+ Q + IENM+N ++V+ +G + V++A+ Sbjct: 61 NNLKAKLEKAGYKVILSFADDKPAQQNADIENMVNNDAKIVVVASKDGTAVGPAVEKARD 120 Query: 105 EGIKVLAYDRMINDAD-IDFYISFDNEKVGELQAKALVD--IVPQG-----NYFLMGGSP 156 G KV+AYDR+I + D +D+Y +F E+VG L+A L+D + G N L GSP Sbjct: 121 AGAKVIAYDRLIMNTDAVDYYATFQLEQVGVLEATWLIDQLKLKDGATGPFNIELFTGSP 180 Query: 157 VDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDG-----------------WLPENALK 199 DNNAK F G +L+PY + G + G W E A K Sbjct: 181 DDNNAKYFFKGAWDLLQPYFEKGVLVSPSQHGQGGVTKDFTVEDWQKISVMSWKTEQAQK 240 Query: 200 IMENALT---ANNNKIDAVVASNDATAGGAIQALSAQ------GLSGKVAISGQDADLAG 250 ME+ L A+ K+DAV+ D A G I A+ ++ G I+GQDA Sbjct: 241 DMESILDSTYAHGEKLDAVLTPYDGIAQGVINAIESKRPDMKPGTDSWPYITGQDAMEIA 300 Query: 251 IKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKA-DTTLNNGLKDVPSRLLTPID 309 + IA Q TV+K + LA+ ++ VE+ G+E + NN DVPS+LL P + Sbjct: 301 VANIAKDKQGETVFKDVNKLADAVYDMVVEIAEGKEVSGLNGKFNNNNIDVPSKLLDPQN 360 Query: 310 VNKNNIKDTVIKDGFHKES 328 + K+N++D V + + + Sbjct: 361 ITKDNLQDLVTAN-YITQD 378 >UniRef50_A0LTZ4 Solute-binding protein n=17 Tax=Actinomycetales RepID=A0LTZ4_ACIC1 Length = 390 Score = 218 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 107/319 (33%), Positives = 165/319 (51%), Gaps = 19/319 (5%) Query: 28 IGMAIDD-LRLERWQ-KDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVL 85 +G+ + D RW+ +DR K ++ G K +Q+A G++ ++MI GV VL Sbjct: 60 VGVILPDTQSSTRWESQDRPNLQKAFQAAGIKADIQNALGDKNKFAQIADSMIQEGVKVL 119 Query: 86 VIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVP 145 +I+ + + V +A Q GIK + YDR+ +Y+SFDN +VG+L + LVD + Sbjct: 120 IIVDLDSPSGAAVEAKAAQAGIKTIDYDRLTLGGSASYYVSFDNVQVGKLMGQGLVDCLK 179 Query: 146 QG----------NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPE 195 + GSP DNNA LF+ G VL P +GK K VGDQ V W Sbjct: 180 DKAASATTSNPVRIIEINGSPTDNNATLFKQGYDSVLDPLYATGKWKKVGDQSVPNWDNA 239 Query: 196 NALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIA 255 A I + LTA K+D V+ +ND A I +QGL K ++GQDA + G++ + Sbjct: 240 QAGTIFQQLLTAAGGKVDGVLVANDGMAQSVITVEKSQGL--KAPVTGQDATVPGLQSVL 297 Query: 256 AGTQTMTVYKPITLLANTAAEIAVELGNGQEP----KADTTLNNGLKDVPSRLLTPIDVN 311 G Q TV+K +L A+ AA++A++L G++P G +DVPS L TP + Sbjct: 298 RGDQCGTVFKNTSLEASAAAQLAIDLIQGKDPGSLINGKVHDPQGNRDVPSALQTPEWIT 357 Query: 312 KNNIKDTVIKDGFHKESEL 330 + ++D V+K G +++ Sbjct: 358 ADKVED-VVKAGQASAADI 375 >UniRef50_A9CF36 ABC transporter, substrate binding protein (Sugar) n=4 Tax=cellular organisms RepID=A9CF36_AGRT5 Length = 309 Score = 218 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 83/327 (25%), Positives = 148/327 (45%), Gaps = 25/327 (7%) Query: 3 IKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESL-GAKVFVQ 61 +K ++ S+LL AAHA+ +G+++ R+ + ++ L G + V+ Sbjct: 1 MKKFIIGAAMSVLL-GTAAHAE--TVGVSMALFDDNFLTVLRNGMLDYSKELKGVTLQVE 57 Query: 62 SANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIND--- 118 A + Q SQI+N I VD +++ P + + + K A I ++ +R + Sbjct: 58 DAQNDVAKQQSQIQNFIASKVDAIIVNPVDTDATAAMSKLAADAKIPLVYVNRQPVNVDS 117 Query: 119 -ADIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYV 176 D +++ D G L+AK + ++ +GN +M G + A++ VLK Sbjct: 118 LPDGQAFVASDETVAGTLEAKEVCRLLGGKGNAVIMMGELSNQAARMRTQSAKDVLKT-D 176 Query: 177 DSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS 236 + I VV +Q W ++ N L++ + +AV+A+ND A GAIQAL A G Sbjct: 177 ECKGISVVEEQTA-NWQRTQGSDLVTNWLSS-GIEFNAVIANNDEMAIGAIQALKAAGKD 234 Query: 237 GKVAIS-GQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNN 295 K + G DA + + AG +TV++ A + A++L G + + Sbjct: 235 MKSYVVAGVDATQDALAAMQAGDLDVTVFQDAAGQGKGALDAALKLVKGDKIEKKVY--- 291 Query: 296 GLKDVPSRLLTPIDVNKNNIKDTVIKD 322 +P +L+TP N+KD V K+ Sbjct: 292 ----IPFQLVTP-----ENVKDYVAKN 309 >UniRef50_A8GZV8 Monosaccharide-transporting ATPase n=29 Tax=Gammaproteobacteria RepID=A8GZV8_SHEPA Length = 299 Score = 218 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 70/286 (24%), Positives = 128/286 (44%), Gaps = 10/286 (3%) Query: 5 NILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSAN 64 ++LL+ + T+ +A A++ I + + + + +D KA LG K+ + Sbjct: 10 SVLLSAALLSVSTSFSASAQDA-IAIVLSTMNNPFFVTMKDGAEAKAAELGYKLIALDSQ 68 Query: 65 GNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFY 124 + +++ +E++ RGV ++I P + ++N ++ A + I VL DR DI + Sbjct: 69 NDPSKELANVEDLTMRGVKAILINPTDALAVTNAIRTANRANIPVLTLDRTAAHGDIVSH 128 Query: 125 ISFDNEKVGELQAKALVDIVPQGNYFL-MGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKV 183 I+ DN GEL + + + + + + G + A+ G V + ++ Sbjct: 129 IASDNIAGGELAGEFIAQQLGKNAKVIQLEGIAGTSAARERGEGFSNA----VTANNFEL 184 Query: 184 VGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISG 243 + Q D + L +MEN L AN + + AV A ND A GA++A+ A G + + G Sbjct: 185 LSSQPAD-FDRSKGLNVMENMLAANGD-VQAVFAQNDEMALGALRAIEAAGKD--ILVIG 240 Query: 244 QDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKA 289 D GI + + TV + LL TA A + GQ + Sbjct: 241 FDGTDEGIAAVRRQQLSATVAQQPELLGATAIMTADRILKGQVVEK 286 >UniRef50_C1DLC8 ABC transporter substrate binding protein n=3 Tax=Gammaproteobacteria RepID=C1DLC8_AZOVD Length = 315 Score = 217 bits (553), Expect = 5e-55, Method: Composition-based stats. Identities = 64/316 (20%), Positives = 138/316 (43%), Gaps = 20/316 (6%) Query: 3 IKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESL--GAKVFV 60 + L ++L + ++++G+++ ++A + G + V Sbjct: 10 LSRTRAVLFATVLCLAGSTALADLRLGVSVGQFDN-YIAYLVRAMQERARQVPGGVTLQV 68 Query: 61 QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD 120 + + + Q+ Q+E+ I + VD +++ P + + + A + GI ++ + + Sbjct: 69 EDSGSDVVRQLGQVESFIAQQVDAIIVNPADTAATGGITERATRAGIPLVYLNSRPEVRE 128 Query: 121 IDF---YISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYV 176 ++ D ++G++Q + L + + +G+ ++ G ++ + AG VL Y Sbjct: 129 FPAGVVFVGTDERRLGQMQMEYLAEKMGGKGDLAILLGRLAHDDTRKRTAGVKDVLARYP 188 Query: 177 DSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS 236 +I+VV +Q D W + L + N L++ + DAVVA+ND GA AL G Sbjct: 189 ---QIRVVEEQSGD-WQRDKGLDLTNNWLSS-GREFDAVVANNDEMGIGAAMALRQAGRR 243 Query: 237 GKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNG 296 +V++ G D G+ IA G +T+ + + A ++A+ L + D Sbjct: 244 -EVSVGGIDGTPDGLAAIARGQLAVTLLRDPVAMGEEAVDVALRLVRKDVVQGDVW---- 298 Query: 297 LKDVPSRLLTPIDVNK 312 +P L+TP + + Sbjct: 299 ---IPVHLITPDNHTQ 311 >UniRef50_D2BKS5 Ribose ABC transporter, substrate binding protein n=16 Tax=Streptococcaceae RepID=D2BKS5_LACLK Length = 324 Score = 217 bits (552), Expect = 5e-55, Method: Composition-based stats. Identities = 64/292 (21%), Positives = 123/292 (42%), Gaps = 16/292 (5%) Query: 22 HAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRG 81 E+ IG++I + + A+ K+ V A + TQ++ ++N I++ Sbjct: 45 KPNELNIGVSISTTNNPYFVSMNNAIKSMAKEKNTKLTVSDAQNDSATQLNNVQNFISQN 104 Query: 82 VDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALV 141 VD ++I P + + +K A I V+A DR N + ++ DN G++ A+A+ Sbjct: 105 VDAILINPVDSDAIVPAIKAANNAHIPVIAMDRGSNGGTVLTTVASDNVAAGKMAAQAVE 164 Query: 142 DIVPQG-NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKI 200 +V + + G+P + G K + ++ Q + L Sbjct: 165 KLVGKNVKVLELSGTPGASATIDRGKGFNSEAKTL----GLNILSSQSA-NFDRTTGLNT 219 Query: 201 MENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQT 260 +N L ++ + + A+ A ND A GA +A+ A G K+AI G D + I AGT T Sbjct: 220 TQNMLQSHKD-VQAIFAQNDEMALGAAKAVQATG--QKIAIFGIDGESETHDAIKAGTMT 276 Query: 261 MTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNK 312 T+ + + A + + G++ + + P L+ +V++ Sbjct: 277 ATIAQQPAKIGEMALQATYDYYQGKKI-------AHMINSPIYLVDKDNVDQ 321 >UniRef50_Q1Z3C1 Putative sugar ABC transporter, periplasmic sugar-binding n=4 Tax=Vibrionaceae RepID=Q1Z3C1_PHOPR Length = 355 Score = 216 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 73/321 (22%), Positives = 132/321 (41%), Gaps = 20/321 (6%) Query: 6 ILLTLCTSLLLTNVA-AHAKEVKIGMAIDDLRLERWQKDRDIFVK-KAESLGAKVFVQSA 63 + +T +L+ A + +IG+AI + +D A+ ++ A Sbjct: 52 LFITGLMALVACGGEKADSNVTRIGVAIPNFDDTFLVNMKDSMSAYAAKQDNLELIFVDA 111 Query: 64 NGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIND-ADID 122 + Q+ QI+N I + VD ++++P N + + + GI+++ +R D Sbjct: 112 KEDTVKQLGQIQNFIIQQVDGIILVPVNTDATQPMTDDILKAGIELVYLNRRPTYLPDGV 171 Query: 123 FYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIK 182 Y+ + + GE QAK GN ++ G A L G K + I+ Sbjct: 172 AYVGSEELRFGEEQAKYAASHSDGGNIGIIMGMMTVEAAILRTQGVEDFFKEKPEYNIIR 231 Query: 183 VVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAIS 242 + W + +MEN + + +K+D ++++ND A GAIQAL A G + Sbjct: 232 ----KQTALWQRSQGMVVMENWINS-GDKLDIIISNNDDMALGAIQALRAAGKLDDTIVI 286 Query: 243 GQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPS 302 G DA G+ I G TV++ A A + A+ + T + + +P+ Sbjct: 287 GVDATPDGLMAIKNGALDATVFQDGRSQARGAIDAALS-------GINKTPRDKITWIPA 339 Query: 303 RLLTPIDVNKNNIKDTVIKDG 323 L V K+N+ + K G Sbjct: 340 EL-----VTKDNLAEFEAKQG 355 >UniRef50_Q9K631 Rhizopine ABC transporter (Rhizopine-binding protein) n=1 Tax=Bacillus halodurans RepID=Q9K631_BACHD Length = 327 Score = 214 bits (545), Expect = 4e-54, Method: Composition-based stats. Identities = 74/329 (22%), Positives = 143/329 (43%), Gaps = 30/329 (9%) Query: 2 KIKNILLTLCTSLLLTNVAAHAK---------------EVKIGMAIDDLRLERWQKDRDI 46 K+ L+ C S LL A+ + ++ IG A D Sbjct: 7 KVAVALIIYCLSFLLVGCASDSDEQMGTESVNKAGDDGKMVIGFAHPDFNDMFLGFLLAG 66 Query: 47 FVK-KAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQE 105 +AE +V A + + Q++Q+E++I +GVD ++ IP + +V A+Q Sbjct: 67 VQAYEAEQTNVEVVYVDAENDSDGQIAQVEDLIAQGVDAIMAIPVDLIATEFIVDRAQQA 126 Query: 106 GIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLF 164 G+ V+ +R + + D Y+ D+ + G +Q + + ++ +G +M G Sbjct: 127 GVPVVLINRDSVERE-DAYVGSDSLQAGTIQMEEVAAVLKGKGKIAIMNGQMGHTAQINR 185 Query: 165 RAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAG 224 G +V+ Y ++VV + GW E ++ME+ + + DAVVA+ND A Sbjct: 186 TLGNKQVVDQYP---GMEVVIEG-TGGWSREKGKELMESWI-ESGQTFDAVVANNDEMAI 240 Query: 225 GAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNG 284 GAI A G+ ++ +G D + ++ G T++V++ T E A++L G Sbjct: 241 GAIMAAEEAGIVDELVFAGIDGTPDALDYMSKGKLTISVFQDAKGQGQTGLEQAIKLAKG 300 Query: 285 QEPKADTTLNNGLKDVPSRLLTPIDVNKN 313 + + + ++P +T +V++ Sbjct: 301 ESAEK-------MTNIPYETITKRNVDEY 322 >UniRef50_Q0SK74 ABC sugar transporter, periplasmic solute-binding protein n=2 Tax=Rhodococcus RepID=Q0SK74_RHOSR Length = 363 Score = 214 bits (545), Expect = 4e-54, Method: Composition-based stats. Identities = 91/326 (27%), Positives = 156/326 (47%), Gaps = 13/326 (3%) Query: 17 TNVAAHAKEVKIGMAIDDLRLERW-QKDRDIFVKKAE--SLGAKVFVQSANGNEETQMSQ 73 + K+ + + R+ ++D +F E + A V V++A G+ Q SQ Sbjct: 25 PAPQGDDAQEKVFFFLPNTTTTRFVERDEPLFTDFLELFAPEATVTVRNAEGDPARQQSQ 84 Query: 74 IENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVG 133 +E+ I G VLV+I + + + A + + V+ YD D + FD +VG Sbjct: 85 VESAIAEGASVLVLISTDARFSGGALTAAAEADVPVVLYDHDAVGGPADVQVIFDPLEVG 144 Query: 134 ELQAKALVDIV----PQG-NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQW 188 Q D++ G +GG+ + + F GQ + L+P DSGKI+VV + Sbjct: 145 RRQGSRAADLIAAMPGDGVKIARVGGNLGEYGTRQFLLGQDEFLQPLADSGKIRVVCETA 204 Query: 189 VDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAIS-GQDAD 247 +D W P E L NN I V ND GG + AL+ +GL+G++ ++ GQDA+ Sbjct: 205 IDDWDPAEGQAFAEECLARENNDIALFVTMNDDLGGGIVAALAGRGLAGRIPVTGGQDAN 264 Query: 248 LAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQ---EPKADTTLNNGLKDVPSRL 304 LA ++ IA T T++K ++ A AA++ + +G E + T++N VP+ Sbjct: 265 LAALQLIAQETLDNTIFKNLSDQAKVAAQLTTSILHGDGIPEEIVNGTIDNQYMAVPTVF 324 Query: 305 LTPIDVNKNNIKDTVIKDGFHKESEL 330 L ++ K+N+ D V+ GF+ ++ Sbjct: 325 LPVQNITKDNL-DVVVNSGFYTWQQI 349 >UniRef50_B0NEL2 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NEL2_EUBSP Length = 321 Score = 214 bits (544), Expect = 4e-54, Method: Composition-based stats. Identities = 69/325 (21%), Positives = 138/325 (42%), Gaps = 25/325 (7%) Query: 1 MKIKNILLTLCTSLLLTNV-----------AAHAKEVKIGMAIDDLRLERWQKDRDIFVK 49 MK + + + L +++++ V + ++ IG + + D Sbjct: 1 MKKRFLGVLLVGAMVMSTVLTGCGNKKESKSGGEDKITIGFSSKTNSDTFVKAIADAAED 60 Query: 50 KAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKV 109 A+ G + + A G+ Q++ E +I + VD L++IP + + + VV A + I + Sbjct: 61 AAKEQGVDLIMADAEGDVNKQINDCETLIAQQVDALIVIPQDVEGSAPVVSMANEADIPI 120 Query: 110 LAYDRMINDADIDFYISFDNEKVGELQAKALVDIVPQGNYF-LMGGSPVDNNAKLFRAGQ 168 + + I D + ++ +++ GE+ D V G+ ++ G + AG Sbjct: 121 IICNGDIADKNYTAFVGCTDQESGEILGTWFNDNVEHGSQICIIEGPMGQSGQVGRYAGF 180 Query: 169 MKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQ 228 +V +V+ Q W + A+ + E+ LT +K+ A+V ND A GA+ Sbjct: 181 EEVGM----LDNFEVLSCQTA-NWKRDEAMALAEDWLTTYGDKLKAIVCENDDMAMGALS 235 Query: 229 ALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPK 288 A A G + V I G D I+ + G ++V + A E+A+++ NG++ + Sbjct: 236 ACKAAGRTD-VVIGGVDGLEDAIQAVKDGELGVSVLQDSAGQGEGAVEVALQIINGEDYQ 294 Query: 289 ADTTLNNGLKDVPSRLLTPIDVNKN 313 DT +P +T +V+ Sbjct: 295 KDT-------RIPFHAITSDNVDAY 312 >UniRef50_Q65S41 RbsB protein n=8 Tax=Pasteurellaceae RepID=Q65S41_MANSM Length = 313 Score = 214 bits (544), Expect = 4e-54, Method: Composition-based stats. Identities = 82/294 (27%), Positives = 136/294 (46%), Gaps = 14/294 (4%) Query: 3 IKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQS 62 +KNI L +A A + +I + + L E + R + A+ + VQ Sbjct: 6 LKNIFKFSALISALPALAFAADKPQIALLMKTLSNEYFISMRQGAEETAKEKNIDLIVQV 65 Query: 63 ANGNEETQ--MSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD 120 A + T+ + +ENMI + VD +++ P + ++A++ GI ++ D ++ Sbjct: 66 AEKEDSTEQLVGLVENMIAKKVDAIIVTPNDSIAFIPAFQKAEKAGIPIIDLDVRLDAKA 125 Query: 121 IDF------YISFDNEKVGELQAKALVDIVPQ-GNYFLMGGSPVDNNAKLFRAGQMKVLK 173 + Y+ DN G L+AK L + + + GN ++ G P +N + + G +K Sbjct: 126 AEAAGLKFNYVGVDNFNGGYLEAKNLAEAIGKKGNVAILEGIPGVDNGEQRKGGALKAFA 185 Query: 174 PYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQ 233 Y D IK+V Q W E AL + N LTAN N I+ + A+ND A GA+ A+ Sbjct: 186 EYPD---IKIVASQSA-NWETEQALTVTTNILTANPN-INGIFAANDNMAIGAVTAVENA 240 Query: 234 GLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEP 287 GL+GKV +SG D I+ + G T+ + A E A++ N QE Sbjct: 241 GLAGKVLVSGYDGIPLAIEYVKQGKMQNTIDQLPKKQVAIAIEHALKQINKQEI 294 >UniRef50_D1PGX0 Putative DNA-binding response regulator/sensor histidine kinase n=1 Tax=Prevotella copri DSM 18205 RepID=D1PGX0_9BACT Length = 497 Score = 213 bits (543), Expect = 7e-54, Method: Composition-based stats. Identities = 76/317 (23%), Positives = 131/317 (41%), Gaps = 20/317 (6%) Query: 1 MK-IKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVF 59 MK I IL+ L S+LL A K V IG++ + R + + ++ + + + Sbjct: 1 MKRINIILIVLSFSMLLLLGACTQKNVVIGVSQCCGGVWREKVNNEMRQAQYQYKNVDLL 60 Query: 60 VQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDA 119 +A + + Q QI++MI R VD++V+ P N ++ ++ A + I V+ +DR + Sbjct: 61 FTTAENDGQCQARQIDSMIARKVDLIVVAPDNVNDVTPAIERAYRAHIPVILFDRKVKTP 120 Query: 120 DIDFYISFDNEKVGELQAKALV-DIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDS 178 I DN + G A+ L + +G + G + G +V+K Y Sbjct: 121 HYTASIGGDNVEAGREVARFLASKLDGKGTVVEITGLKDASPVIERHRGFHEVMKNYP-- 178 Query: 179 GKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGK 238 IKVV + W E A ++M+ L D V +D A GA +G+ + Sbjct: 179 -GIKVVTLES--NWKLERAQELMKQYLDK-GGHADGVFGHSDLGAIGAFLEAERRGIDKQ 234 Query: 239 VAISGQDADL---AGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNN 295 + I G D G+ R+ G + P E+A+ + G+ K D + Sbjct: 235 MLIVGIDGLPGEWEGVDRVKRGQFAASYVYPT--QGEKIMELAMNILQGKPYKKDNVMK- 291 Query: 296 GLKDVPSRLLTPIDVNK 312 S L TP + + Sbjct: 292 ------SFLATPENCDA 302 >UniRef50_Q98J19 Ribose-binding protein of ribose ABC transporter n=4 Tax=Alphaproteobacteria RepID=Q98J19_RHILO Length = 335 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 80/321 (24%), Positives = 139/321 (43%), Gaps = 20/321 (6%) Query: 1 MKIKNILLTLCTSLLLTNVAA---HAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAK 57 M + LLT + + A ++ I ++ +L + + +A++ G Sbjct: 21 MNRREFLLTSVAAGAMVLAAPSVFAEDKLTILGSVPNLGFPFFVHMLNEIKAEAQAQGVN 80 Query: 58 VFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIN 117 + + Q + IE + + V+ +VI P + L+ ++EA + G+ V+ DR ++ Sbjct: 81 LTESDGQNSATKQTADIEAALVQKVNAIVISPLDVNALAPAIEEAVKAGVPVVTIDRRVD 140 Query: 118 D-ADIDFYISFDNEKVGELQAKALVDIVPQGNYFL-MGGSPVDNNAKLFRAGQMKVLKPY 175 I ++ DN K GE +A A+V P G + G P A G VL P Sbjct: 141 GVQGILAHVGADNVKGGEAEASAMVAAFPNGAKLFHLQGQPGAGPAIDRNKGVHNVLDPL 200 Query: 176 VDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGL 235 D K +++ +Q + AL + E L AN K DA++ +ND A GA++A +A+ Sbjct: 201 KD--KYQIIFEQTA-NFARAEALSVTEAGLAANG-KPDAIICANDDMALGALEACAARNF 256 Query: 236 SGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNN 295 + V I G DA + + G TV + + TA +IAV + + + Sbjct: 257 TD-VKIYGFDALPEALVAVRDGKLAGTVEQFPGQQSRTAVQIAVAYAKNKTEPKEKLV-- 313 Query: 296 GLKDVPSRLLTPIDVNKNNIK 316 LLTPI + K+N+ Sbjct: 314 --------LLTPIVIGKDNLD 326 >UniRef50_B1B7W7 D-ribose-binding periplasmic protein n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1B7W7_CLOBO Length = 325 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 83/332 (25%), Positives = 137/332 (41%), Gaps = 30/332 (9%) Query: 1 MKIKNILLTLCTSLLLT----NVAAHAKEV---------KIGMAIDDLRLERWQKDRDIF 47 MK K +L + T +L+ A + + + + L + W+ + Sbjct: 1 MKGKRLLGIILTLGMLSCVFGGCGNSADQGKGGEKGKGGNVAVVLKALNSDYWKTVQAGA 60 Query: 48 VKKAESLGAKVFVQ--SANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQE 105 A+ LG KV V +A + Q S IE+ I +GVD LV+ P +A++E Sbjct: 61 NDAAKELGVKVQVLGPNAETDVVGQTSLIEDQIVKGVDALVVAPLQPNAAITTFDKAEKE 120 Query: 106 GIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVPQGN-YFLMGGSPVDNNAKLF 164 I V+ D N ++ N G+L + + + +G+ ++ G P D Sbjct: 121 KIPVVLIDTDANWDKKKSFVGTGNIAAGKLGGEYISKKLKKGDEAIIIRGVPGDRTQDER 180 Query: 165 RAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAG 224 G K L ++ IKVV Q + E A+ +MEN L + N I V +ND A Sbjct: 181 TQGAQKAL----EAAGIKVVEIQPANS-EREKAISVMENLLQTHPN-IKGVFCTNDEMAL 234 Query: 225 GAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNG 284 GA++AL G ++I G D +K I G T TV + + E AV++ G Sbjct: 235 GAVKALQQAGKKNIISI-GVDGSPDALKSIKEGGLTGTVAQNSYDIGKKGVETAVKVLRG 293 Query: 285 QEPKADTTLNNGLKDVPSRLLTPIDVNKNNIK 316 ++ + D + L+ +VN+ K Sbjct: 294 EKVET-------RIDTGTTLVDKQNVNEQEAK 318 >UniRef50_C9Z5F4 Putative lipoprotein n=2 Tax=Streptomyces RepID=C9Z5F4_STRSW Length = 343 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 102/326 (31%), Positives = 166/326 (50%), Gaps = 19/326 (5%) Query: 18 NVAAHAKEVKIGMAIDDLRLERWQK-DRDIFVKKAESLGAK---VFVQSANGNEETQMSQ 73 ++ +G+ D +R+++ D KK L +A + ETQ Q Sbjct: 9 ASPTKGDDITVGVLFPDKDTKRYEQFDYPNIKKKIAELTDNKGITKYANAEKDPETQTGQ 68 Query: 74 IENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVG 133 ++ M+ VD++++ + + ++ V+ A GI V+AYDR+ ID Y+SFDNE VG Sbjct: 69 MKQMVEDKVDIIIVDAVDSKAIAPAVQSAHDAGIPVIAYDRLAQG-PIDGYVSFDNELVG 127 Query: 134 ELQAKALVDIVPQ---GNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVD 190 ++Q ++LV+ + +M GSP D NA +F+ G + L+ K+ + Sbjct: 128 QVQGRSLVEDLGDSAANKIVMMNGSPTDPNAAMFKEGALSELQD-----KVTISETFDTK 182 Query: 191 GWLPENALKIMENALTANN-NKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLA 249 W P A ME A++ + IDAV A+ND AG I L G++ ++GQDADL Sbjct: 183 DWDPVVAKANMEKAVSKLGVDNIDAVYAANDGIAGAVIDVLKTAGVAKVPPVTGQDADLD 242 Query: 250 GIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGL-----KDVPSRL 304 ++RI G Q MTVYK A AAE+AV G+ + D + + K +P++L Sbjct: 243 AVQRILTGDQYMTVYKSFPTQAAAAAEMAVAKVQGRSIEFDALAKDSIDSPTTKKIPAQL 302 Query: 305 LTPIDVNKNNIKDTVIKDGFHKESEL 330 + P+ + K+NIKDTV+ DG + ++ Sbjct: 303 VPPVALTKSNIKDTVVADGIYTVKQI 328 >UniRef50_B0NBQ1 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NBQ1_EUBSP Length = 352 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 76/348 (21%), Positives = 147/348 (42%), Gaps = 37/348 (10%) Query: 2 KIKNILLTLCTSLLLTNVAAHAKE-----VKIGMAIDDLRLER----WQKDRDIFVKKAE 52 +I I L LC + ++ A K+ +KIG+AI + K E Sbjct: 7 RIARICLALCLAAMMAGCAGTEKKEEKTGIKIGVAIYRGDDAFISSLCASLENAIKDKEE 66 Query: 53 SLGAKVFV--QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVL 110 LG KV V A ++ +Q Q+++ I +G D + + + V + +V +AK+ GI ++ Sbjct: 67 KLGKKVVVNIADAKNSQSSQNDQVDDFIRKGYDAICVNMVDRTVAAVIVDKAKEAGIPII 126 Query: 111 AYDRMINDADI-----DFYISFDNEKVGELQAKALVDIV------------PQGNYFLMG 153 ++R + D+ +Y+ D + GEL+ + + D + Y ++ Sbjct: 127 FFNREPVEEDMAIWNQTYYVGTDAREAGELEGQIVADAWKSQESRIDKNGDGKLQYVMLE 186 Query: 154 GSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKID 213 G V ++ + +K + + G + W+ A ++M+ + ++I+ Sbjct: 187 GEQVHQDSLIRTEYSVKTI---LKEGIVTEKLASGTGNWMRSPAYELMQEWIGQYGSQIE 243 Query: 214 AVVASNDATAGGAIQALSAQGLSG--KVAISGQDADLAGIKRIAAGTQTMTVYKPITLLA 271 V+++ND A GAI+AL G+SG + G D G+++I G TV A Sbjct: 244 VVLSNNDEMAMGAIEALVENGMSGGNGPIVVGIDGTEDGLEKIIKGEMEGTVMNDARGQA 303 Query: 272 NTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTV 319 + IA G++PK + G + V +N+++ + Sbjct: 304 ESILGIACACAEGKDPKQEVPELKGQ----YVRVPHSPVTADNVQEFI 347 >UniRef50_B1G1G9 Monosaccharide-transporting ATPase n=1 Tax=Burkholderia graminis C4D1M RepID=B1G1G9_9BURK Length = 369 Score = 211 bits (537), Expect = 3e-53, Method: Composition-based stats. Identities = 72/320 (22%), Positives = 129/320 (40%), Gaps = 28/320 (8%) Query: 21 AHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINR 80 A + KIG ++ L + + K A+ G + +ANG+ + Q++ N++++ Sbjct: 63 AAGGKTKIGFSVSTLNNAFFVGLKAGVEKGAKEQGFDLVQTNANGDAQQQVNDAINLLSQ 122 Query: 81 GVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKAL 140 GV LV+ P + + + V++A I V DR + + +++ DN +G+ AK + Sbjct: 123 GVTALVLNPIDSKAIIPAVEKANAMNIPVFTLDRGSDGGKVTSFVASDNVALGQTAAKWI 182 Query: 141 VDIV------PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLP 194 D + +GN + G A G + Y D IKVV Q + Sbjct: 183 ADQLTKRYGSAKGNVVDLIGLVGTTAATDREKGFSDEIAKYPD---IKVVARQEGA-FDQ 238 Query: 195 ENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGL------SGKVAISGQDADL 248 E +L M N L +IDAV +ND GA +A+ G + + G D Sbjct: 239 EKSLNAMTNILQKY-PQIDAVFGANDDNTVGAEKAIDNAGRYKPLDDKQHILVIGADGTA 297 Query: 249 AGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPI 308 + I AG Q T+ + +A + + + ++ A+ P+ L+ Sbjct: 298 QALSAIRAGKQDATISQNPIQMAAKSLQFVADYTAKKDVPANYAW-------PTLLIDKS 350 Query: 309 DVNKNNIKDTVIKDGFHKES 328 +++ D K G E Sbjct: 351 NID----SDATKKYGLWSEE 366 >UniRef50_A6LHB1 Sensor protein n=4 Tax=Bacteroidales RepID=A6LHB1_PARD8 Length = 887 Score = 210 bits (536), Expect = 4e-53, Method: Composition-based stats. Identities = 71/296 (23%), Positives = 122/296 (41%), Gaps = 17/296 (5%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVK--IGMAIDDLRLERWQKDRDIFVKKAESLG-AK 57 MK LL T ++L + K+ K IG++ L Q + +A + + Sbjct: 1 MK-HPFLLVWLTLIVLCGCTSSGKQKKHVIGLSQCMLDDAWRQAMINDMRIEASNYDDVE 59 Query: 58 VFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIN 117 + ++ A N ETQ+ QI ++I + VDVL+I PY + ++ V +EA + GI + DR +N Sbjct: 60 IIIKDAQNNNETQIQQIRDLIRQKVDVLIISPYQSEPITAVAEEAYRAGIPTIITDRKVN 119 Query: 118 DADIDFYISFDNEKVGELQAKALVDIVPQGNYFL-MGGSPVDNNAKLFRAGQMKVLKPYV 176 ++ +N ++G + +P L + G + A+ G + L+ Sbjct: 120 TDQYTSFVGANNYEIGLAAGNYAANYLPPNAIILEIWGLTQTSPAQERHKGFVDALRERE 179 Query: 177 DSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQG-- 234 D K+ G WL + A ME + +ID V A ND A A + A Sbjct: 180 DLSFRKIEGQ-----WLVDTA--RMELRKLEHPEQIDFVYAHNDMMAIAAREYFMAWDSI 232 Query: 235 LSGKVAISGQDADL-AGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKA 289 ++ I G DA AG++ + G + P A+ + G+ Sbjct: 233 RGRELRIIGVDAVAGAGLEAVEDGRINASFLYPTG--GEQVIRTAMRIIQGEPVDK 286 >UniRef50_A6UHJ3 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Sinorhizobium RepID=A6UHJ3_SINMW Length = 322 Score = 210 bits (535), Expect = 5e-53, Method: Composition-based stats. Identities = 73/316 (23%), Positives = 122/316 (38%), Gaps = 25/316 (7%) Query: 16 LTNVAAHAKEVKIGMAIDDLRLE-RWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQI 74 + A K+ +IG + R Q ++DI + A+ ++ + E Q++ + Sbjct: 25 AGDAVAQDKKFRIGFSQATTIEPWRAQFNKDIIAEAAKHPDVELIITDGEDRTEKQVADV 84 Query: 75 ENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGE 134 EN+I + VD L++ P L+ VV++A I V DR + ++ DN+ +G Sbjct: 85 ENLIRQEVDALLVSPKESAGLTGVVQQAIDAKIPVFVLDRNVETDQYTQFVGGDNKLIGR 144 Query: 135 LQAKALVDIVP-----QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWV 189 + V+++ QGN + G A G + IK + D+ Sbjct: 145 AAGEYAVELLGGKGKAQGNIVEIWGGMGTQPAHDRHDGFHEFTDK---EPGIKNLLDKQS 201 Query: 190 DGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADL- 248 W + A IM AL NN KID V ND A GA A G ++ G DA Sbjct: 202 GDWKQDQAYNIMATAL-RNNEKIDLVYGHNDPMAYGAYLAAKDAGREKEIKFIGIDALPN 260 Query: 249 AGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPI 308 G+ ++ G T T AV+ G++ + TL+ + Sbjct: 261 EGVTWVSNGELTATFLYATP--GAEGLRQAVKFLKGEKVEKTVTLDT------------L 306 Query: 309 DVNKNNIKDTVIKDGF 324 V + N + +G Sbjct: 307 KVTEENAAQIMKDNGL 322 >UniRef50_D1PGW4 Sensor protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PGW4_9BACT Length = 935 Score = 210 bits (534), Expect = 7e-53, Method: Composition-based stats. Identities = 70/305 (22%), Positives = 128/305 (41%), Gaps = 16/305 (5%) Query: 1 MKIK-NILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVF 59 MK K ++++ + +LLT A ++ IG++ + W+ + +K E L + Sbjct: 1 MKRKLHLIIYVAIIVLLTGCAQKPRKFVIGVSQCSEDI--WRDKLNDELKMGEYLNDSLI 58 Query: 60 VQ--SANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIN 117 V+ S+N + Q Q+ I+ GVD+L++ P +S V+ A +GI V+ YDR N Sbjct: 59 VKLASSNDDNVLQNKQVNQFIDEGVDLLIVSPNQLSAISKSVERAYDKGIPVILYDRKTN 118 Query: 118 DADIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYV 176 +I DN +G+ + + +G + G + A G M +KPY Sbjct: 119 SDKYTAFIGCDNYTIGKSMGTFIAQQLQGKGRIVEISGLEGSSPALERHRGFMDAIKPYP 178 Query: 177 DSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS 236 ++VV + W E ++ M+ L + D V A ND A GA A + Sbjct: 179 ---GLQVVASEE-GNWKEEGGIQAMKRILKQTQD-FDYVFAHNDCLAWGAYVAARQMRVK 233 Query: 237 GKVAISGQDA---DLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTL 293 +G D + G++ + G + P + +A+++ Q + D L Sbjct: 234 RNYKYTGVDGMATEGGGLELVRDGIFEASYLYPTK--GDEVIALAMKILKHQPYERDNYL 291 Query: 294 NNGLK 298 + + Sbjct: 292 STSII 296 >UniRef50_A6E6Q9 Sensor protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6E6Q9_9SPHI Length = 918 Score = 210 bits (534), Expect = 7e-53, Method: Composition-based stats. Identities = 73/326 (22%), Positives = 133/326 (40%), Gaps = 21/326 (6%) Query: 4 KNILLTLCTSLLLTNVAAHAKE--VKIGMAIDDLRLERWQKDRDIFVKKAE-SLGAKVFV 60 LL T+LL + ++ IG + + D + GAK+ Sbjct: 5 SRYLLLFITALLSFSCNQKQEKHAYLIGFSQCVGSDLWRKTMLDEMKMELSLHPGAKLVY 64 Query: 61 QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD 120 A+ N TQ+ Q++ M+++G+D+L+I P + L+ +V++ +GI V+ DR Sbjct: 65 ADADNNSNTQIKQVKEMLDQGIDLLIISPNEAKPLTEIVEQTYSDGIPVIVIDRKTTSNL 124 Query: 121 IDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSG 179 Y+ DN ++G + ++ L + + N + G P + G LK + + Sbjct: 125 YTCYVGADNYQIGYMASQYLGNTISGPANILEVMGLPGSSPTIERNKGFNDGLKKFPNL- 183 Query: 180 KIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKV 239 KIK Q W+ NA + + ++ N ID V A ND A A G++ + Sbjct: 184 KIK---SQVYGDWMKPNAERQLSK-ISDQLNDIDVVFAHNDNMAFAAQSVFKKLGIASQA 239 Query: 240 AISGQDADL---AGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNG 296 G DA G++ I+ G ++ P A A+++ + + L Sbjct: 240 KFIGIDATPGAGGGLQMISNGLIDASMLYPTG--GKEAITTAIKIMDKIPFSKELIL--- 294 Query: 297 LKDVPSRLLTPIDVNKNNIKDTVIKD 322 PS ++ +V N++ IK Sbjct: 295 ----PSLVIDSSNVRLMNMQWERIKT 316 >UniRef50_C6CIQ9 Periplasmic binding protein/LacI transcriptional regulator n=37 Tax=Gammaproteobacteria RepID=C6CIQ9_DICZE Length = 312 Score = 209 bits (533), Expect = 9e-53, Method: Composition-based stats. Identities = 72/319 (22%), Positives = 130/319 (40%), Gaps = 18/319 (5%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFV 60 MK K +L + +++ A A+ +I + +L + + VK A+ LG + V Sbjct: 1 MK-KITILAAAMAFTMSSGLAQAQNEQIVFSTPNLAMPFEVHMQRTAVKAAKELGVNLQV 59 Query: 61 QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD 120 + G+ Q++ +EN I RG V+ P + +S V E + + V+ DR + Sbjct: 60 LDSQGSSPKQVADLENAITRGAQGFVVSPNDVNAVSGAVTEIQDAKLPVVTLDRSVKTDK 119 Query: 121 IDFYISFDNEKVGELQAKALVDIVPQG-NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSG 179 + +N K G+ + P G + L+ G P ++ G LK Sbjct: 120 KVPHFGANNYKGGQAIGDFVKARFPNGADIVLLTGQPGSSSNIERTQGIRDSLK--AGGS 177 Query: 180 KIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS-GK 238 K ++V DQ W+ ++I+E+ L + + ++++ND A GAI+AL +QGL G+ Sbjct: 178 KYRLVADQ-TGNWMRSEGMRIVESVLPSLPKRPQVILSANDDMALGAIEALQSQGLKPGE 236 Query: 239 VAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLK 298 V ++G DA + R+ G T + A + Sbjct: 237 VMVTGFDAVPEALARVRDGWLAATADQRPGYAVTQAMTQLTNNIRTKSAITGADY----- 291 Query: 299 DVPSRLLTPIDVNKNNIKD 317 P + K+N+ D Sbjct: 292 -------PPTMITKDNLND 303 >UniRef50_Q7UNV9 Bifunctional carbohydrate binding and transport protein n=1 Tax=Rhodopirellula baltica RepID=Q7UNV9_RHOBA Length = 438 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 65/322 (20%), Positives = 133/322 (41%), Gaps = 16/322 (4%) Query: 4 KNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQ-- 61 ++ C T+ KE+ + WQ + + E +GAK+ + Sbjct: 120 TLLVCAGCQPPADTSANTGEKELHFAVIPKGTTHIFWQSVKHGAEQAGEEIGAKITFRGP 179 Query: 62 SANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADI 121 S + + Q++ ++ +N VD +++ P + L VKEA + G+ V+ +D +N Sbjct: 180 SKENDRDEQINVVQGFLNARVDGILLAPLDADALVRPVKEASRAGVPVVIFDSGLNTDPG 239 Query: 122 DF--YISFDNEKVGELQAKALVDIVPQ--GNYFLMGGSPVDNNAKLFRAGQMKVLKPYVD 177 DF Y++ DN + G+L +A+ + + + G+ L+ + G + + Y Sbjct: 240 DFVSYVATDNFEGGKLAGEAMANALGEKGGDVILLRYEQGSESTHQREEGFLYSIAEY-- 297 Query: 178 SGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSG 237 I+V+ G E+A+ + L ++ D + + TA GA++AL + L+G Sbjct: 298 -SNIRVLSSDQYAGTTTESAIDKAQALLNRFGDEADGICTVCEPTAEGALRALRERKLAG 356 Query: 238 KVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGL 297 KV + D+ + + ++AG V + + A + G+ P+ Sbjct: 357 KVKLVTFDSSDSLRESLSAGEVNAIVLQDPVAMGYQAVKTMAAHLRGETPEQ-------F 409 Query: 298 KDVPSRLLTPIDVNKNNIKDTV 319 D + T + + NI + Sbjct: 410 IDTGVFVATAKNQDDENIARLL 431 >UniRef50_D1QRT0 Putative DNA-binding response regulator/sensor histidine kinase n=1 Tax=Prevotella oris F0302 RepID=D1QRT0_9BACT Length = 522 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 72/313 (23%), Positives = 132/313 (42%), Gaps = 20/313 (6%) Query: 2 KIKNILLTLCTSLLLTNV-AAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFV 60 KI + +LT L++ + + ++K+ IG++ + R + ++++ G + Sbjct: 3 KISSFILTFMGCLMICSCNSRNSKQYVIGVSQCSEDIWRDKLNQELQTATYMEDGVTMRF 62 Query: 61 QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD 120 SA+ N++ Q+ QIE I GVD+L+I P ++ VV +A ++GI V+ +DR D Sbjct: 63 ASADDNDKRQIQQIEQFIKDGVDLLIISPNQAHAITPVVDKAVEKGIPVILFDRKA-DGK 121 Query: 121 IDFYISFDNEKVGELQAKALVDIVP-QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSG 179 +I DN +VG + + GN + G + A G ++ + Y Sbjct: 122 YTAFIGADNVEVGRQMGDYVARQLDYHGNVIELMGLKGSSPAIERHRGFIERISRYPGIK 181 Query: 180 KIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGK- 238 ++ + W + TA+ I V A ND A GA +A GL K Sbjct: 182 LVESLQGDWTKASGRRAIQAFSQRHGTASCATIACVFAQNDRMAMGAREA----GLLPKS 237 Query: 239 VAISGQD---ADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNN 295 G D + G+K +A + + P + ++A+ + N + + + L Sbjct: 238 TLFCGVDALPGEQGGMKLVADSVLSASYIYPTR--GDLVMKLAMNILNHRPYQKENLLQ- 294 Query: 296 GLKDVPSRLLTPI 308 S L+TP Sbjct: 295 ------SALVTPD 301 >UniRef50_A6WFF0 Solute-binding protein n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6WFF0_KINRD Length = 362 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 113/330 (34%), Positives = 165/330 (50%), Gaps = 14/330 (4%) Query: 8 LTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAK--VFVQSANG 65 L C T AA A+ + + L D F + V VQ+A Sbjct: 22 LAGCGGDTATTSAAAAEGPHVAFLVPATSLRFMAYDVPNFSVELAQRCPTCVVDVQTAE- 80 Query: 66 NEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYI 125 ++ TQ +Q I G + +V++ +G ++V A + V+AYDR++ D+ ID+Y Sbjct: 81 DQATQNAQGVQAIRDGAEAVVVVALDGAAAGDLVSAANSADVPVVAYDRLLKDSAIDYYT 140 Query: 126 SFDNEKVGELQAKALVDIVP----QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKI 181 SFD VGEL +A++D + G ++ G P DNNA LF AG VL GK+ Sbjct: 141 SFDGGAVGELGGQAILDAIGTDTAGGAIVMLQGDPADNNAGLFAAGAHSVLD-----GKV 195 Query: 182 KVVGDQWVDGWLPENALKIMENALTA-NNNKIDAVVASNDATAGGAIQALSAQGLSGKVA 240 V +++V GW + A M AL N ++ V + D A GA+QAL GLSG V Sbjct: 196 DVASERYVAGWSADQAAVEMRAALGELNGRRLLGVYTAYDGLAAGALQALDEAGLSG-VP 254 Query: 241 ISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDV 300 I+GQDA+ A ++RI AGTQTMTVYK + A A++ ++ G+ P T +NG V Sbjct: 255 ITGQDAETAALQRILAGTQTMTVYKDLPGQARATADLVADVLEGKTPATTGTTDNGAGAV 314 Query: 301 PSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 P+ LL P V K ++ V+ DG+ L Sbjct: 315 PTVLLQPQAVGKAEVQSEVLADGYTTVDAL 344 >UniRef50_UPI0001B4C057 putative D-ribose-binding protein component of ABC transporter n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B4C057 Length = 325 Score = 209 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 79/299 (26%), Positives = 132/299 (44%), Gaps = 13/299 (4%) Query: 9 TLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEE 68 T C A K++ IG+A+ +L+ + + + + +A+ G KV V A G+ Sbjct: 24 TACGRGGNGAKTADGKQITIGLAVANLQADFFNQIKQSVTAEAKKKGIKVIVSDARGDAA 83 Query: 69 TQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFD 128 TQ++QI++ I+R V ++ IP VK A + I V+ DR +I+ D Sbjct: 84 TQVNQIQDFISRQVSAIIYIPAGATAAGVPVKAANRAKIPVVTVDRNPPGEPGKSFIASD 143 Query: 129 NEKVGELQAKALV-DIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQ 187 + +V + +G ++ G + G + LK ++ IKVV Q Sbjct: 144 SVAAARTLGNYVVKESGGKGQLAILQGQIGTTPQVDRQKGFGQALK---NAPGIKVVSQQ 200 Query: 188 WVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDAD 247 D W + A + ++ L A+ ID + DA A GA QA+ A G K I G D D Sbjct: 201 PAD-WAQDKAYSVSQDMLQAHPG-IDILWGQADAMALGAAQAVKASGSKKKHLIVGFDGD 258 Query: 248 LAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLT 306 +AG+K + GT T+ + + + AV++ G++ A P+ LLT Sbjct: 259 IAGLKAVRRGTVDATMVQQTRKMGRMSVNTAVDIIKGKKVPAQQLQ-------PAFLLT 310 >UniRef50_B2IJW8 Periplasmic binding protein/LacI transcriptional regulator n=14 Tax=Alphaproteobacteria RepID=B2IJW8_BEII9 Length = 314 Score = 209 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 75/320 (23%), Positives = 139/320 (43%), Gaps = 25/320 (7%) Query: 3 IKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESL-GAKVFVQ 61 +K ILL ++ + +A A+ IG+++ R+ + +SL V ++ Sbjct: 1 MKRILLAAVMAINF-SCSAGAES--IGVSMSAFDDNFLTVLRNALIAHGQSLPNVNVQME 57 Query: 62 SANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD- 120 A + Q SQ++N I GV +++ P + + K A + ++ +R + D Sbjct: 58 DAQNDVARQQSQVQNFIASGVSAIIVNPVDTDATEAISKLAADAKVPLVYVNRQPANVDR 117 Query: 121 ---IDFYISFDNEKVGELQAKALVDIV------PQGNYFLMGGSPVDNNAKLFRAGQMKV 171 +I+ D G LQA+ + ++ N +M G + ++ V Sbjct: 118 LPETQAFIASDEAVSGTLQAQEVCRLLKARGKGKSANVVVMMGQLSNQASRQRTKDVHDV 177 Query: 172 LKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALS 231 + + +KVV +Q W A+ +M N L+A + DAV+A+ D A GAIQA+ Sbjct: 178 IAT-PECAFMKVVEEQTA-NWQRTEAMNLMSNWLSA-GIQFDAVIANADEMAIGAIQAMR 234 Query: 232 AQGLS-GKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKAD 290 + GL ++G D GI+ + G +TV++ A + A+ L G++ Sbjct: 235 SAGLPVKDYIVAGIDGGRDGIELMRQGYLDVTVFQDAAGQGAGALDTALMLARGKK---- 290 Query: 291 TTLNNGLKDVPSRLLTPIDV 310 + VP +L+TP +V Sbjct: 291 ---TDRTIWVPFQLITPTNV 307 >UniRef50_C7QF49 Solute-binding protein n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QF49_CATAD Length = 386 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 103/316 (32%), Positives = 158/316 (50%), Gaps = 13/316 (4%) Query: 24 KEVKIGMAIDDLRL-ERWQ-KDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRG 81 K K+G+ + D RW D D + G +Q++NG+ T SQ ++M+N G Sbjct: 60 KNNKVGILLPDTNSSPRWVNSDPDELKTQCAQYGLTCDIQNSNGSATTMTSQAQSMLNEG 119 Query: 82 VDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALV 141 V VL++ + + +A+ +G+ + YDR+ +Y+SFDN VG+ Q AL Sbjct: 120 VGVLMLTNLDSGSAKAIEAQAQAKGVVTIDYDRLTLGGTAQYYVSFDNVAVGKAQGTALT 179 Query: 142 DIVPQG-----NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPEN 196 Y G+ DNNA LF+ G VLK GDQ + P Sbjct: 180 KCTQVAGKTAVKYVEEDGAATDNNATLFKQGYDSVLKAQT---GWTQAGDQSGNWDNPAG 236 Query: 197 ALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAA 256 + + L ++AV+ +ND A AI L QGL+GKVA+SGQDA G++ I Sbjct: 237 TAQSVFQKLLQGAPDLNAVMVANDEMANAAITVLKQQGLNGKVAVSGQDATATGLQNILN 296 Query: 257 GTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTL--NNGLKDVPSRLLTPIDVNKNN 314 G Q T+YKP+ A+ A ++A ++ +GQ+P A + G +DVPS L TP+ V+K+N Sbjct: 297 GDQCFTIYKPVKGEADVAVKLASQVLSGQKPTAPAVVHDPTGNRDVPSYLATPVVVDKSN 356 Query: 315 IKDTVIKDGFHKESEL 330 I DG+ K +++ Sbjct: 357 I-TLPFTDGYQKAADV 371 >UniRef50_Q2KAX1 Probable sugar ABC transporter, substrate-binding protein n=3 Tax=Rhizobium etli RepID=Q2KAX1_RHIEC Length = 307 Score = 208 bits (529), Expect = 2e-52, Method: Composition-based stats. Identities = 75/326 (23%), Positives = 137/326 (42%), Gaps = 24/326 (7%) Query: 1 MKIKNILLTLCTSLLLT---NVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAE-SLGA 56 MK + L C L T A A + +G A ++ F++ ++ Sbjct: 1 MKAISKLALACAISLATISTGSAFAADKFVVGYANMADTDVFVMARKNAFIEASKSDPAV 60 Query: 57 KVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI 116 +V AN + Q+ QI+N I + V+ +V++P + Q + V++A Q GI V+A Sbjct: 61 EVNFSDANNDVSKQLDQIDNFIAQKVNAIVVVPVDYQGIVPGVEKANQAGIPVIALGIQS 120 Query: 117 NDADIDFYISFDNEKVGELQAKALVDIVPQGNYFL-MGGSPVDNNAKLFRAGQMKVLKPY 175 ++ N G LQ + + + +P+G L + G+P ++ + + G L Sbjct: 121 AGGKYT-FVGSKNIDAGRLQGEYMKEHLPKGAKILYLEGTPGLSHTQERKKGFEDAL--- 176 Query: 176 VDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGL 235 + + + +K+ E+ + + K DA+VA+ND A GA++AL Sbjct: 177 -GRSDVTTLASLSA-NYDRAEGMKVTEDWIQSF-PKFDAIVAANDQMALGALEALQGADR 233 Query: 236 SGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNN 295 V ISG D + I AGT + T+++ A A E+ L G++ A+ Sbjct: 234 LKGVMISGVDGTADALNAIKAGTMSQTIFQDAAGQAKAAFEVVEGLKKGEDAPAE----- 288 Query: 296 GLKDVPSRLLTPIDVNKNNIKDTVIK 321 +L+ + K+N+ K Sbjct: 289 -------KLVPFASITKDNVGQYAKK 307 >UniRef50_A7V0S7 Sensor protein n=6 Tax=Bacteroides RepID=A7V0S7_BACUN Length = 919 Score = 208 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 70/312 (22%), Positives = 133/312 (42%), Gaps = 14/312 (4%) Query: 1 MKIKNILLTLCTSLL---LTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAK 57 M+ N+ + +L + +IG++ R Q + +I + + Sbjct: 1 MRQHNLRILFFLLVLWGVAVACSRREARFRIGVSQCSEDEWRRQMNSEILREAHFYEDVE 60 Query: 58 VFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIN 117 V +++A + + Q I +I GVD+L++ P ++ VV+EA GI V+ DR I Sbjct: 61 VDIRTAVDDNDRQAKDIRELIAEGVDLLIVAPNEATPITPVVEEAYNRGIPVIVVDRKIL 120 Query: 118 DADIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYV 176 Y+ DN ++G+ + + +++ QG+ + G A G +K + Y Sbjct: 121 SDKYTAYVGADNYEIGKAVGEYVANVLHGQGDVVEISGLVGSTPAVDRHQGFVKAISAYP 180 Query: 177 DSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS 236 I+++ + WL A + M+ L+ ID V A ND A GA A + +G Sbjct: 181 ---GIRLLAVEDGA-WLQLKAGEKMDTLLSRF-PHIDLVYAQNDRMAAGAYAAAAREGRE 235 Query: 237 GKVAISGQD---ADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTL 293 + G D G++++ AG T P + +IA+++ N ++ +T L Sbjct: 236 KDMRFIGIDALSGKDYGVEKVLAGELDATFIYPTG--GDRVMQIAMDILNKRDFPRETIL 293 Query: 294 NNGLKDVPSRLL 305 + D + L+ Sbjct: 294 GTSVVDRDNALI 305 >UniRef50_C1RM32 Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=2 Tax=Micrococcineae RepID=C1RM32_9CELL Length = 364 Score = 208 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 95/312 (30%), Positives = 151/312 (48%), Gaps = 17/312 (5%) Query: 27 KIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLV 86 IG+++ L + W + +++F + G + VQ+A+ Q QIE MI RG +V+V Sbjct: 46 VIGVSLPWLGTQNWAEAQEMFTTRLTEAGFEPLVQAADNKVTQQQQQIEAMIERGAEVIV 105 Query: 87 IIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD-IDFYISFDNEKVGELQAKALVDIV- 144 + P +G L +V++ A EGI V+ YDR+I + +D + F + + GELQ ++L+D + Sbjct: 106 VGPVDGTQLGSVLERAAAEGIAVIGYDRLIENTPAVDAVVQFGSLRTGELQGQSLLDGLA 165 Query: 145 -----PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQW------VDGWL 193 P + L GG P D NA F G M VL+P +D G + V Q W Sbjct: 166 ARKGEPPYHVELFGGGPADPNAPAFFEGAMSVLQPKIDDGTLVVGSGQTEFTQAATPDWD 225 Query: 194 PENALKIMENALTANN--NKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGI 251 A M++ L+ +ID V++ ND A + + G V ++G DA+ + Sbjct: 226 NAKAQARMDSLLSGFYSAEEIDGVLSPNDGIARAVMTSAQQAGQETPV-VTGLDAENESV 284 Query: 252 KRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQE-PKADTTLNNGLKDVPSRLLTPIDV 310 + G Q TV KP L E+ L G+ P+ D ++NG DV LL P+ V Sbjct: 285 VSVWQGQQWSTVAKPTVELVGRTVELIQSLQQGEALPEPDEEVDNGQTDVAVYLLDPLVV 344 Query: 311 NKNNIKDTVIKD 322 + N ++ D Sbjct: 345 TQENAQEVFADD 356 >UniRef50_C5VEK6 D-ribose-binding periplasmic protein n=3 Tax=Corynebacterium matruchotii RepID=C5VEK6_9CORY Length = 325 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 82/302 (27%), Positives = 133/302 (44%), Gaps = 23/302 (7%) Query: 17 TNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIEN 76 T +A AK I A+ + + R+ KKA+ LG + Q A + TQ +Q+ N Sbjct: 41 TTGSASAK--TITFALSTQANPFFVQMRESAQKKADELGLAINFQDAADDSATQSNQLAN 98 Query: 77 MINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQ 136 G V++I P + ++ V++ E I V+A DR +N+A++ YI+ DNE G+ Sbjct: 99 AAASGTGVVIINPTDSDAMAPAVQQLVDEKIPVVAVDRAVNNANVASYIASDNETGGKQA 158 Query: 137 AKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPE 195 AK L D + +G ++ G + ++ G + LK D+ IKVV Q + + Sbjct: 159 AKVLSDAINGEGEILVLQGKTGSSASRERGKGFDEGLK---DNPNIKVVAKQTAE-FERA 214 Query: 196 NALKIMENALTANNNKIDAVVASNDATAGGAIQAL-SAQGLSGKVAISGQDADLAGIKRI 254 L + N L A+ N + A+ A ND A GAI+AL S G V + G D +K I Sbjct: 215 KGLDVTTNLLQAHPN-VKAIFAENDEMALGAIEALGSKAGKD--VKVIGFDGAEDALKAI 271 Query: 255 AAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNN 314 G ++ + +A A A +L G+ + + K N Sbjct: 272 KDGRMYASIAQQPVKMAEQAVIEASKLLKGETATKKMQ------------VEVVAATKEN 319 Query: 315 IK 316 + Sbjct: 320 VD 321 >UniRef50_B9JL62 Sugar ABC transporter n=7 Tax=Bacteria RepID=B9JL62_AGRRK Length = 361 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 102/307 (33%), Positives = 160/307 (52%), Gaps = 18/307 (5%) Query: 25 EVKIGMAIDDLRLERWQK-DRDIFVKKAESL--GAKVFVQSANGNEETQMSQIENMINRG 81 + + + D R+++ D F + + L G KV Q+ANG+ Q Q ++I++G Sbjct: 33 DATVAFLMPDQGSTRYEEHDYPGFQAEMKKLCAGCKVIYQNANGDASRQQQQFNSVISQG 92 Query: 82 VDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALV 141 +V+ P + +++VK A+ +G+KV+AYDR I D+Y+SF+NE++G+ AK+LV Sbjct: 93 AKAIVLDPVDSTAAASLVKLAQSQGVKVIAYDRPIPSVPADYYVSFNNEEIGKAIAKSLV 152 Query: 142 DIV-------PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLP 194 D + G + GSP D A L + G L G V+ + W P Sbjct: 153 DHLKSKGVKAGDGGLLEINGSPTDAAAGLIKKGIHAGLAD----GGYPVLAEFDTPDWAP 208 Query: 195 ENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRI 254 A + +T KI VVA+ND T G A+ A A G+ ++G DA +AG++ I Sbjct: 209 PKAQQWASGQITRFGKKILGVVAANDGTGGAAVAAFKAAGVDPVPPVTGNDATIAGLQLI 268 Query: 255 AAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNN 314 AG Q T+ KP ++A AA +A++L +G+ PKADT L D P++L TP V N Sbjct: 269 IAGDQYNTISKPSEIVAAAAANVAIQLLSGETPKADTKL----FDTPTQLFTPALVTAEN 324 Query: 315 IKDTVIK 321 +K +I Sbjct: 325 LKAEIID 331 >UniRef50_Q1R0N3 Periplasmic binding protein/LacI transcriptional regulator n=49 Tax=Proteobacteria RepID=Q1R0N3_CHRSD Length = 318 Score = 207 bits (527), Expect = 5e-52, Method: Composition-based stats. Identities = 78/322 (24%), Positives = 131/322 (40%), Gaps = 18/322 (5%) Query: 1 MKIKNILLTLCTS--LLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKV 58 MK K +L+ LL + A+ + + + ++D W + I + AE LG + Sbjct: 3 MKGKRLLIAALAVGVPLLASGASAQDKGLMSIIVNDTSNPYWFTEGKIAEETAEKLGYEA 62 Query: 59 FVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIND 118 V S G+ T+ QI+ I + +++ P N V++A + GI V + IN Sbjct: 63 DVSSHKGDTNTESRQIDTAITNQAEAIILDPANADGSIGAVRKAVEAGIPVFIINAEINQ 122 Query: 119 ADID-FYISFDNEKVGELQAK-ALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYV 176 + + +N + L A+ + + Y + G+P DNNA G VL Y Sbjct: 123 QGLAEAQLVSNNAQGAALGAQQWIKSVGDSARYVELKGAPSDNNAATRSNGYETVLSQYP 182 Query: 177 DSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS 236 ++ VG V W ++ L AN + ID V++ ND A GAI AL G Sbjct: 183 ---GLEKVGSD-VANWDRTQGFNKTQSMLQANPD-IDGVISGNDEMALGAISALKEAGKL 237 Query: 237 GKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNG 296 V + G D ++ + AG TV +P+ + + A +A + E D Sbjct: 238 DDVVVGGFDGSPDAVEAVKAGEMDYTVLQPVAIFSEMAVRMADKYVTTGETGVDGE---- 293 Query: 297 LKDVPSRLLTPIDVNKNNIKDT 318 +L + +N+ D Sbjct: 294 -----KQLFDCFLITSDNVDDY 310 >UniRef50_A8RW63 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RW63_9CLOT Length = 375 Score = 207 bits (526), Expect = 6e-52, Method: Composition-based stats. Identities = 66/284 (23%), Positives = 121/284 (42%), Gaps = 11/284 (3%) Query: 22 HAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRG 81 + + IG + + + +AE G K+ V A N Q+S +E++I + Sbjct: 85 NVSDYLIGYSQLANTGTYRIAETNSMKDEAEKRGFKLIVTDAQDNTAKQVSDVEDLIAQN 144 Query: 82 VDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDA---DIDFYISFDNEKVGELQAK 138 +D+L++ P + L ++ AK+ + V+ DR+ D YI+ D G+ + Sbjct: 145 IDLLILSPREFEGLETALQTAKENSVPVILVDRLAKGEAGVDYVTYIATDFVWEGQAAGE 204 Query: 139 ALVDIVPQ-GNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENA 197 L D N + G+ ++A+ G V+ + +K++ Q + Sbjct: 205 WLKDKTGGTCNIIELTGTVGSSSAQDRATGFAGVVDQ---NEGMKIIASQ-TGNFERSEG 260 Query: 198 LKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSG--KVAISGQDADLAGIKRIA 255 K+MEN L A+ ++DAV ND A GA+QA+ A G + + G D ++ K + Sbjct: 261 QKVMENLLQAHGGEVDAVFCHNDQMALGAVQAIKAAGYKPNEDILVIGIDGEMDSFKSVI 320 Query: 256 AGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKD 299 AG + TV + + ++ GQE T + + D Sbjct: 321 AGEMSATVVSSP-MYGPITFDTVEKILAGQEVPEQTIMEGVVVD 363 >UniRef50_A9WDY0 Periplasmic sugar-binding protein n=15 Tax=Bacteria RepID=A9WDY0_CHLAA Length = 387 Score = 207 bits (526), Expect = 6e-52, Method: Composition-based stats. Identities = 99/335 (29%), Positives = 165/335 (49%), Gaps = 28/335 (8%) Query: 24 KEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVD 83 +++ +G+ + RW +D F + + G +V + + G+ + +E +I +G+ Sbjct: 49 QQLAVGIVLPTKDEPRWIQDETRFREALQQAGYQVEILFSQGSSAKEKENVEALIAKGIK 108 Query: 84 VLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD-IDFYISFDNEKVGELQAKALVD 142 VL+I P++G + + A+ G+KV++YDR+I + D +D+Y++FD+ VG QA+ LVD Sbjct: 109 VLIICPHDGTAAAAAAEAARAAGVKVISYDRLIRETDAVDYYVTFDSIAVGAQQAQYLVD 168 Query: 143 IV-PQGNYF-LMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKV----------------- 183 GN L G+ DNNA LF G KVL+P + G + Sbjct: 169 HASGTGNPLYLYAGAASDNNAFLFFEGAWKVLQPKIADGTFVIKNSSEAVALQNKLDLTR 228 Query: 184 -----VGDQWVDGWLPENALKIMENALTANNNKIDA---VVASNDATAGGAIQALSAQGL 235 + Q W A + E LTA ++A ND TA A +A Sbjct: 229 DEMAKIIGQVTTNWDFNTAKNLAEANLTAATAADKGKVYILAPNDGTARAIADAFAADKD 288 Query: 236 SGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNN 295 + ++GQDA+ A ++ I G Q+MTV+K + L A + AV L Q+P+A T NN Sbjct: 289 VTEYFVTGQDAEKASVQYIIDGRQSMTVFKDVRTLVQDAIKAAVALLQDQQPEARGTYNN 348 Query: 296 GLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 G KDVP+ + V ++N++ +I G++ S+ Sbjct: 349 GKKDVPAIQSPVVTVTRDNVRAALIDSGYYSASDF 383 >UniRef50_A0LXA2 Sensor protein n=1 Tax=Gramella forsetii KT0803 RepID=A0LXA2_GRAFK Length = 907 Score = 206 bits (525), Expect = 8e-52, Method: Composition-based stats. Identities = 61/319 (19%), Positives = 131/319 (41%), Gaps = 23/319 (7%) Query: 1 MKIKNILLTLCTSLLLTNVA--AHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKV 58 MK +LL + S+L + + ++ K+G + + + W+++ + +K S+ + Sbjct: 1 MKYLKLLLFVFLSILTDSCQVKSEEEKFKVGFSQA-MTTDNWRREMNKSMKLEASMHPDI 59 Query: 59 F--VQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI 116 ++ A + Q++ IE I GVDVL++ P ++ +++A GI + DR I Sbjct: 60 ILEIKDAENHITNQVAHIEEFIKDGVDVLIVSPIQSIPITPAIEKAMAAGIPTIIIDRKI 119 Query: 117 NDADIDFYISFDNEKVGELQAKALVDI-VPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPY 175 + Y+ +N ++G AK ++ + + + G + A G K L Sbjct: 120 EGQNFTAYVGANNIEIGRNAAKYILSHSSGKADIIEITGQEGSSPAYERSMGFKKTLDSV 179 Query: 176 VDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGL 235 + V+ W + + + L + D + A ND A GA + ++ L Sbjct: 180 PELKVRHVIK----GDWEKTSIQSKLSDLLDSVKAP-DYIFAHNDRMALGAWEVARSKSL 234 Query: 236 SGKVAISGQD---ADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTT 292 ++ I G D GI+ + T+ P + ++A ++ NG+ + Sbjct: 235 EEEINIIGVDGVFGPNGGIQLVKDNILNATILYPTGGM--ETIKLAEDILNGENVNKNNI 292 Query: 293 LNNGLKDVPSRLLTPIDVN 311 L + ++ ++V+ Sbjct: 293 LR-------TVIIDSVNVD 304 >UniRef50_A1R5X6 D-ribose-binding protein n=1 Tax=Arthrobacter aurescens TC1 RepID=A1R5X6_ARTAT Length = 328 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 81/321 (25%), Positives = 136/321 (42%), Gaps = 20/321 (6%) Query: 9 TLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEE 68 T C K KI + + E KA+ LG +V V A G+ Sbjct: 21 TGCAPSAAQEANDGTKTKKIAVLLYSQSFEFMVALGQGVKDKAKELGVEVTVLDAKGDSS 80 Query: 69 TQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFD 128 TQ+SQI++ + +GVD +V+ P N L V+ G V D +I D ++FD Sbjct: 81 TQISQIQDQLAQGVDGIVLSPNNSAELVPGVQMIHDAGKTVTTVDSVIPGDIADAAVAFD 140 Query: 129 NEKVGELQAKALVDIVP-QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQ 187 NEK G+L A+AL ++ +G G+ +A L G +K + IKV+G Sbjct: 141 NEKAGKLGAEALAKLMGEKGTVLEYQGAKGAYHAILRGKGFNDGIKQFP---GIKVIGRD 197 Query: 188 WVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSA------QGLSGKVAI 241 W +NAL + + TA++ I+ + + ND G + LS G + + + Sbjct: 198 --AQWTADNALSLTVDNFTADS-SINGLFSHNDEMVRGIVSGLSQINKDAPVGAANHIPL 254 Query: 242 SGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVP 301 G D + RI G Q T+ + + A + V+L +G++ + Sbjct: 255 VGVDGTPLALDRIRNGVQDATMDQNPFEMGALALQAQVDLLDGKQVPKMQLTD------- 307 Query: 302 SRLLTPIDVNKNNIKDTVIKD 322 ++L+T +V+ + + KD Sbjct: 308 TKLITKENVDDPTLWGNIFKD 328 >UniRef50_Q2YI92 Putative two-component system sensor histidine kinase n=1 Tax=unidentified microorganism RepID=Q2YI92_9ZZZZ Length = 511 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 70/303 (23%), Positives = 128/303 (42%), Gaps = 28/303 (9%) Query: 19 VAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMI 78 + K IG++ + R +++ ++ + ++ +A ++E Q+ QI++++ Sbjct: 18 CSQGGKRYTIGVSQCSEDIWREKQNAELRMGAYFHDNVELKFAAAYDSDERQVQQIDSLM 77 Query: 79 NRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAK 138 N G+D+L++ P +S + A +GI V+ ++R +IS DN ++G + + Sbjct: 78 NEGIDLLIVAPNQVNTISPAIDRAYDKGIPVIVFERKTGSQKYTAFISADNYEMGHVMGE 137 Query: 139 ALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENA 197 +V + +GN + G + A G M +K D IKVVG D W A Sbjct: 138 YIVSRLHGKGNVLEIKGLAGSSPAIERHNGFMDAIK---DEPGIKVVGSLQGD-WTEATA 193 Query: 198 LKIMENALTANNN-KIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADL---AGIKR 253 + + L AN +D V +ND TA GA +AL K G D GI+ Sbjct: 194 CQKSKEWLAANEGVPVDLVFGANDRTAMGAREALGE-----KPLYCGIDGLPGKNGGIQL 248 Query: 254 IAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKN 313 + + P + ++A+ + GQ + +T L + L V + Sbjct: 249 VRDSLLDASFIYPTH--GDQLMDLAIRILEGQPYEKETMLMSAL------------VTHD 294 Query: 314 NIK 316 N K Sbjct: 295 NAK 297 >UniRef50_A1WLB7 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Bacteria RepID=A1WLB7_VEREI Length = 328 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 72/303 (23%), Positives = 132/303 (43%), Gaps = 25/303 (8%) Query: 21 AHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINR 80 AHA +KIG + L+ + + ++ A++ G ++ ANG+ Q + I++++ R Sbjct: 29 AHAAGLKIGFSQVTLQSPFYVQLKEGAEAAAKAGGDELIFLDANGDVNKQNNDIQDLLTR 88 Query: 81 GVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKAL 140 VDVL+I P N + + A++ G+ V+ DR IN + ++ DN K+G+ A+ Sbjct: 89 KVDVLIINPVNPDAVKPAIAAAQKNGVPVITVDRSINGGGVTAHLGRDNVKMGKAVGDAV 148 Query: 141 VDIVPQ-----GNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPE 195 + + + G + G R G LK K+V + + + Sbjct: 149 LAELKKKGTTRGKVIEIQGDAGGTVMAARRDGFHDALK----GSGFKIVAGPYAE-YTRA 203 Query: 196 NALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIA 255 NA+ M++ L A+ + + V A ND A GA++ L+ G V ++G D + +A Sbjct: 204 NAVTAMQDLLQAHPD-VKVVYAHNDDMAMGALKVLAEAGKKD-VFVAGVDGLSEALASMA 261 Query: 256 AGTQT-MTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNN 314 G Q T L + + A + G++ A ++ G K V K N Sbjct: 262 GGDQYVATALNDPRYLGDMTVQTARAIKAGKKVPA--FVDAGTK----------AVTKAN 309 Query: 315 IKD 317 + + Sbjct: 310 VGE 312 >UniRef50_A5ZT83 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZT83_9FIRM Length = 324 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 82/322 (25%), Positives = 127/322 (39%), Gaps = 26/322 (8%) Query: 9 TLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESL-GAKVFVQSANGNE 67 L + + A + IGM+ +L D AE +V A + Sbjct: 18 VLAAGTVTVSAAEKKDKYVIGMSQCNLGEPWRVAMNDQIAMAAEKHPEFEVIFADAAQDN 77 Query: 68 ETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISF 127 Q++ IEN + GVD+++ P L+N V A GI V+ DR I+ +I Sbjct: 78 SKQIADIENFVQMGVDLIITSPNEATPLTNAVSAAYDAGIPVILLDRKIDGDKYTQFIGA 137 Query: 128 DNEKVGELQAKALVD-IVPQGNYF-LMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVG 185 DN +G + + + D ++P G + G + G + +K + KI++V Sbjct: 138 DNVDMGRIAGEYIADTLLPDGGKVCEIKGLEGTSGGIDRDNGFREGIKK---NDKIEIVA 194 Query: 186 DQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQD 245 D WL E A+ + E L N++ID +A ND A GA A G G + G D Sbjct: 195 VNNAD-WLREKAITVAEEML-QTNDEIDLFLALNDPMAEGAYIAAKNAGREGDILFVGFD 252 Query: 246 ADL---AGIKRIAAGTQTMTVYKPITLLANTAAEIAVELG-NGQEPKADTTLNNGLKDVP 301 GI+ + G +MT P A E A +L G+E T Sbjct: 253 GLPTPDGGIRSVMDGRLSMTQVYPTG--GTEAIESAYQLLVEGKELDKTLT--------- 301 Query: 302 SRLLTPIDVNKNNIKDTVIKDG 323 LT V +N ++ + K G Sbjct: 302 ---LTSEIVTPDNAEELLEKFG 320 >UniRef50_A5KKL8 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KKL8_9FIRM Length = 325 Score = 205 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 81/340 (23%), Positives = 146/340 (42%), Gaps = 38/340 (11%) Query: 1 MKIKNILLTLCTSLLLTNVAA-------------------HAKEVKIGMAIDDLRLERWQ 41 MK K + + +C S+ + A + K+ M + + + E Sbjct: 2 MKKKMLAVAVCVSMCMMAFAGCTSESGGGSDKKAEQTEGKKEESGKVFMTVSNQQNEFMV 61 Query: 42 KDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKE 101 + F + E+ G +V + A+ + Q+SQIE I+ + +++ P + L+ +KE Sbjct: 62 GMAENFKEVGEAAGYEVQLMDADLDATKQVSQIETAISENAEAILVEPCSVDGLTTGLKE 121 Query: 102 AKQEGIKVLAYDRMINDAD-IDFYISFDNEKVGELQAKALV-DIVPQGNYFLMGGSPVDN 159 A GI V ++ D + I D + GEL+ + ++ D +M G+ + Sbjct: 122 AHDAGIPVFVIHNNVSATDLVTSLIHVDVRQGGELKMEQVIKDCGEDAKIAIMTGTLGQD 181 Query: 160 NAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASN 219 G VL+ Y + ++VV + W +A + EN L A+ +IDA+V +N Sbjct: 182 TTNQICGGYDAVLEKYPN---VEVVFEG-AGNWGATDAAPLAENWL-ASGKEIDAIVCNN 236 Query: 220 DATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAV 279 D A G + L + G S ++ + G DA G+K + +G T+Y A E+ Sbjct: 237 DGMALGVVSVLKSAGKSEQIKVYGLDATNEGLKAVDSGEMAATIYVDSKAEIEKAFEMLE 296 Query: 280 ELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTV 319 +L G++ A+ VPS L V K N+K+ + Sbjct: 297 DLKAGKKVDAE-------YKVPSVL-----VTKENVKEYM 324 >UniRef50_B3T6P5 Putative periplasmic binding protein and sugar binding domain of the LacI family protein n=1 Tax=uncultured marine microorganism HF4000_APKG2K17 RepID=B3T6P5_9ZZZZ Length = 302 Score = 204 bits (520), Expect = 3e-51, Method: Composition-based stats. Identities = 82/320 (25%), Positives = 134/320 (41%), Gaps = 23/320 (7%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFV 60 MK+ + L ++++ A A V + M W +KA LG K+ V Sbjct: 1 MKLVKLFLASSLAIII-GTLAFADTVLLSMKGPGAGNPFWASVERGAREKAAELGVKIVV 59 Query: 61 QSA--NGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIND 118 S + ++Q++Q+E+ I +GV + I + L+ V++ A+ GI V+ D + Sbjct: 60 LSPPQESDVQSQINQVEDQITKGVTAIAIAVTDPNALAKVIESARSAGIPVVFIDTKGIN 119 Query: 119 ADIDFYISFDNEKVGELQAKALVDIVPQG-NYFLMGGSPVDNNAKLFRAGQMKVLKPYVD 177 + +I DN+ ++ A + D V +G + ++ G + K G LK Sbjct: 120 KGVT-FIGTDNKAGAKMAADFICDRVSRGSDVAILQGIITQSTGKARADGAHAGLK---- 174 Query: 178 SGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSG 237 + +V +Q W +MEN LT N K+ AV ASND A GA++AL + Sbjct: 175 GCGLNIVAEQPA-NWDRAQGRTVMENILTR-NQKLKAVFASNDNMALGAVEALKDADMLN 232 Query: 238 KVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGL 297 V + G DA+ K I AG T T+ + + E A+EL G+ Sbjct: 233 DVIVVGFDANPDAAKSILAGEMTATIAQFSYNMGAYGVEKALELAKGRSLP--------- 283 Query: 298 KDVPSRLLTPIDVNKNNIKD 317 P + V K N D Sbjct: 284 ---PVVDTGTLLVTKKNAAD 300 >UniRef50_P49308 Putative rhizopine-binding protein n=37 Tax=Proteobacteria RepID=MOCB_RHIME Length = 309 Score = 204 bits (520), Expect = 3e-51, Method: Composition-based stats. Identities = 74/312 (23%), Positives = 138/312 (44%), Gaps = 19/312 (6%) Query: 5 NILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESL-GAKVFVQSA 63 + + +L + AAHA+ IG ++ + R+ A++L G + ++ A Sbjct: 2 KKFIIGIAAAVLVSTAAHAE--TIGASMAVFDDKFGTLLRNGMEDYAKTLDGVDLQIEDA 59 Query: 64 NGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIND----A 119 + Q SQI+N I GVD +++ P + + + K A GI ++ +R + Sbjct: 60 LNDVAKQQSQIQNFIAAGVDAIIVQPVDTDATTVMSKLAADAGIPLVYVNREPVNIDTLP 119 Query: 120 DIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDS 178 + +++ + G LQ + + ++ +G ++ G + A++ VL Sbjct: 120 EKQAFVASNEVDSGTLQTREICKLLDGKGKAVVIMGELSNQAARMRTKDIHDVLAT-DQC 178 Query: 179 GKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS-G 237 I++V +Q W +M N L+A + DAV+A+ND A GAIQAL A G S Sbjct: 179 KGIEIVQEQTA-NWQRTQGADLMTNWLSA-GIEFDAVIANNDEMAIGAIQALKAAGRSMD 236 Query: 238 KVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGL 297 V I G DA + +AAG ++V++ + + A++L G+ + Sbjct: 237 SVVIGGIDATDDALAAMAAGELDVSVFQDAVGQGKGSIDAALKLSKGEAVERK------- 289 Query: 298 KDVPSRLLTPID 309 +P L+T + Sbjct: 290 IYIPFELVTKAN 301 >UniRef50_A4TI53 Sugar ABC transporter periplasmic binding protein n=23 Tax=Yersinia RepID=A4TI53_YERPP Length = 319 Score = 204 bits (520), Expect = 3e-51, Method: Composition-based stats. Identities = 75/327 (22%), Positives = 137/327 (41%), Gaps = 15/327 (4%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFV 60 MK + I L L + +V+A A+ +KIG A L + + A+ G + Sbjct: 1 MKKRLIGLLLAGVTISMSVSA-AEPLKIGFANRTLNGAFFNGLTEYMKIHAKEKGYTLIT 59 Query: 61 QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIN-DA 119 A G+ Q++ +E+M+++G++ L++ P + Q + + AK+ G+ + D I +A Sbjct: 60 TDARGDLNKQIADVEDMLSQGINYLILNPQDPQAGLRITEIAKRAGVPTVILDSDIALEA 119 Query: 120 DIDFYISFDNEKVGELQAKALVDIVPQG--NYFLMGGSPVDNNAKLFRA----GQMKVLK 173 + + +N K L + V N + G+ + + R G + Sbjct: 120 PVITRVQANNAKNNNLIGEYAVGQFGDKPMNCIFLSGNQGNLVGQARRDNFLLGVAEAQL 179 Query: 174 PYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQ 233 + + + W W + LK ME+ + A +KI+ V + D A GAI+AL A Sbjct: 180 RKYNRTNVNFLSQGW-GNWDQQGGLKAMEDIIVAQGDKINCVYSEMDDMALGAIRALKAA 238 Query: 234 GLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTL 293 V + D G++ + G T LL +T E+ + GQ D Sbjct: 239 NKLDNVKVYAHDGYKKGLEAVKKGELQATASNNPDLLTSTVLEVIGQYQAGQTSFPDYVY 298 Query: 294 NNGLKDVPSRLLTPIDVNKNNIKDTVI 320 +PS L+T +V+K +D++ Sbjct: 299 ------IPSILITKDNVDKYYKEDSIF 319 >UniRef50_C6WNS7 Monosaccharide-transporting ATPase n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WNS7_ACTMD Length = 364 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 106/326 (32%), Positives = 167/326 (51%), Gaps = 12/326 (3%) Query: 16 LTNVAAHAKEVKIGMAIDDL-RLERWQ-KDRDIFVKKAESLGAKVFVQSANGNEETQMSQ 73 +G+ + D RW+ +DR + E+ G + V++A +E S Sbjct: 23 AAGPPERPTRPLVGVILPDTESSARWEEQDRPQLQRALEAEGLEPVVENARNDEFRFASI 82 Query: 74 IENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVG 133 +++I RGV VL+I P + + V +A++ GI V+ YDR D+ +SFDNE VG Sbjct: 83 ADDLIARGVAVLLITPLTPEGGATVEHKARKAGIPVIDYDRFSVGGAADYLVSFDNEAVG 142 Query: 134 ELQAKALVDIVPQ---GNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVD 190 ELQA+ LVD + + G+P DNNA F GQ +VL P + G ++V D Sbjct: 143 ELQARGLVDCMGDRRGARVIELQGAPQDNNAMQFADGQRRVLGPRYERGDYRLVASTSAD 202 Query: 191 GWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAG 250 W P E AL + ++D V+A+ND A AIQ L A+GL+GKV ++GQDA + G Sbjct: 203 RWDPLLGRARFEQALNDSGGRVDGVLAANDRLAAAAIQVLRARGLAGKVPVTGQDATVDG 262 Query: 251 IKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKD------VPSRL 304 ++ + G Q +TV+K I A AA +A L +G +AD + +D V + L Sbjct: 263 LRAVLRGEQCLTVHKSIRDEAEAAARLASALADGDVARADALASATTEDPTNGRRVRAVL 322 Query: 305 LTPIDVNKNNIKDTVIKDGFHKESEL 330 L + V+++ ++ ++ G + EL Sbjct: 323 LGAVPVHRDGVR-VLVASGVVRAEEL 347 >UniRef50_B9KA11 Ribose ABC transporter, periplasmic ribose-binding protein n=7 Tax=Bacteria RepID=B9KA11_THENN Length = 326 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 74/314 (23%), Positives = 123/314 (39%), Gaps = 28/314 (8%) Query: 16 LTNVAAHAKEVK--IGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQ 73 T +A ++ K + + I L + + ++AE LG + + + + + + Sbjct: 22 FTGLAQEQQKPKGKMAIVISTLNNPWFVVLAETAKQRAEQLGYEATIFDSQNDTAKESAH 81 Query: 74 IENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADID-FYISFDNEKV 132 + +I G D ++ P + VK AK+ GI V DR IN + I DN Sbjct: 82 FDAIIAAGYDAIIFNPTDADGSIANVKRAKEAGIPVFCVDRGINARGLAVAQIYSDNYYG 141 Query: 133 GELQAKALVDIVPQG-------NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVG 185 G L + V + + Y + G G V+ Y + K+V Sbjct: 142 GVLMGEYFVKFLKEKYPDAKEIPYAELLGILSAQPTWDRSNGFHSVVDQYPE---FKMVA 198 Query: 186 DQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQD 245 Q + + + A K+ E L A+ +I A+ NDA A GA++A A G + + I G D Sbjct: 199 QQSAE-FDRDTAYKVTEQILQAH-PEIKAIWCGNDAMALGAMKACEAAGRTD-IYIFGFD 255 Query: 246 ADLAGIKRIAAGTQT-MTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRL 304 I I G Q T+ + L+A A E A + G+ + + VP Sbjct: 256 GAEDVINAIKEGKQIVATIMQFPKLMARLAVEWADQYLRGER--------SFPEIVP--- 304 Query: 305 LTPIDVNKNNIKDT 318 +T V + NI Sbjct: 305 VTVELVTRENIDKY 318 >UniRef50_B5K0N1 ABC sugar transporter, periplasmic solute-binding protein n=2 Tax=Octadecabacter antarcticus RepID=B5K0N1_9RHOB Length = 364 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 82/336 (24%), Positives = 156/336 (46%), Gaps = 14/336 (4%) Query: 8 LTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERW-QKDRDIFVKKAESL--GAKVFVQSAN 64 + L + AA K+ + + R+ ++D +FV A+V VQ+ Sbjct: 16 VALLATGFAAGPAAAEDGAKVFFMLPNSTTIRFERRDAPLFVAAMAERLPNAEVIVQNGE 75 Query: 65 GNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFY 124 G+ Q +E+ + +G D++V + + + + A+ + V+ Y+ + + Sbjct: 76 GDPTRQQRLVEDALVQGADLIVYASSDANLAAGALLAAEDASVPVMLYEHDSVGGRAEAH 135 Query: 125 ISFDNEKVGELQAKALVDIVPQGN-----YFLMGGSPVDNNAKLFRAGQMKVLKPYVDSG 179 + F+ VG+ Q +++ + + G+ + + GQ + L+P +D+G Sbjct: 136 VLFNALAVGQAQGARAAELIEAMDRDIVRVARVMGNQGEYGTAQYEIGQDQFLQPLIDAG 195 Query: 180 KIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQAL--SAQGLSG 237 K++VV + + W P A EN LT +D + ND T GG++ AL GL+ Sbjct: 196 KVEVVCEAFTPNWDPTLAQTFAENCLTRTGGGVDMFLGMNDGTTGGSVAALISQGYGLNE 255 Query: 238 KVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKA---DTTLN 294 V GQDA + +K I G Q TV+K + ++A AA++AV + +G + A + +N Sbjct: 256 IVVTGGQDATIEAVKYIVQGWQDNTVFKDLRVMAEGAADVAVAILDGDDLPAQWINGEVN 315 Query: 295 NGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 NG D+P+ L ++ +N+ D V+ G + +L Sbjct: 316 NGFMDIPAAFLPVNNITIDNVAD-VVDAGLYTWEQL 350 >UniRef50_D1ANT2 Periplasmic binding protein/LacI transcriptional regulator n=3 Tax=Bacteria RepID=D1ANT2_SEBTE Length = 330 Score = 203 bits (518), Expect = 5e-51, Method: Composition-based stats. Identities = 72/315 (22%), Positives = 133/315 (42%), Gaps = 34/315 (10%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVK-------------------IGMAIDDLRLERWQ 41 MK + L T LL + +E K I + + L W Sbjct: 1 MKNIMKIFLLLTMFLLVSCGGAKEEAKTEDGNEPAKTEQKAEGQAEIAIVLKTLSNPFWV 60 Query: 42 KDRDIFVKKAESLGAKVFVQSA--NGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVV 99 + ++ K+A + G KV + +A + + Q+ IEN++++G + I P + + Sbjct: 61 EMKEGIEKEAAAQGIKVDIIAASSEEDVQEQLRLIENLLSKGYKAIGIAPLSPVNTIPAI 120 Query: 100 KEAKQEGIKVLAYDRMIN-------DADIDFYISFDNEKVGELQAKALVDIVPQGN-YFL 151 EA ++GI V+ D ++ + +++ DN KVG A+ ++ +P+G + Sbjct: 121 VEANKKGIYVVNIDEKVDMEQLKKSGGSVLAFVTTDNVKVGAKGAEYIIGKLPEGGEVAI 180 Query: 152 MGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNK 211 + G + + + R G + K K K+V Q D W AL + N + N Sbjct: 181 IEGKSGNASGEFRRQGATEAFKA---DSKFKLVASQPAD-WDRSKALDVAANLIQKYPN- 235 Query: 212 IDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLA 271 + A+ A ND A GA+QA++ G +G++ + G D I G TV + ++ Sbjct: 236 LKAIYACNDTMALGAVQAVANAGKTGQILVVGTDGAPEARTSIDEGKLNATVAQDPAMIG 295 Query: 272 NTAAEIAVELGNGQE 286 T+ +I +E + Sbjct: 296 ATSLKILIEAIKDKP 310 >UniRef50_Q8RBP9 Periplasmic sugar-binding proteins n=1 Tax=Thermoanaerobacter tengcongensis RepID=Q8RBP9_THETN Length = 339 Score = 203 bits (517), Expect = 7e-51, Method: Composition-based stats. Identities = 81/357 (22%), Positives = 148/357 (41%), Gaps = 46/357 (12%) Query: 1 MKIKNILLT-----LCTSLLLTNV------------------AAHAKEVKIGMAIDDLRL 37 MK +I LT L SL+ + A+ K+ I + D Sbjct: 1 MKRSSIFLTILVLVLAISLVFSGCSSKQQTPSSSSTQESSQTASSEKKYNIVLITMDSMD 60 Query: 38 ERWQKDRDIFVKKAESLG-AKVFVQSA--NGNEETQMSQIENMINRGVDVLVIIPYNGQV 94 E W + KA+ LG ++ ++ + Q+ +E+ IN+ D ++I P + Sbjct: 61 EHWLAVKAGAEAKAKELGNVQLTFRAPAEKADPNEQVRMMEDAINQKADAILIAPTDQTA 120 Query: 95 LSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMG 153 L+ VV++A GI V+ D + +++ DN K E+ A L +++ +G ++ Sbjct: 121 LTPVVEKAFDAGIPVILIDSPVKTDKYVSFVATDNIKAAEMAADKLGELLGGKGKIAIIS 180 Query: 154 GSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKID 213 P + G LK I+++ Q+ G AL + LTA+ + + Sbjct: 181 AQPGSGTTIMRENGFKDRLKEKY--PDIQIITTQYSMG-DKNRALNQALDILTAHPD-LA 236 Query: 214 AVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANT 273 +N+ + G A+ + L+GKV + G D A I I ++ + ++ Sbjct: 237 GFYGTNEGSTIGIAMAIKQKDLAGKVKVVGFDISQATINAIKENYIQASMVQNPYMMGYK 296 Query: 274 AAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDV-NKNNIKDTVIKDGFHKESE 329 EIAV+ G+E VP R+ T + V K+N+ D V+K+ + +S+ Sbjct: 297 GVEIAVDKLQGKE-------------VPKRVDTGVTVMTKDNV-DEVVKEYYKGQSK 339 >UniRef50_D1AIH6 Galactose-binding protein n=3 Tax=Bacteria RepID=D1AIH6_SEBTE Length = 353 Score = 203 bits (516), Expect = 8e-51, Method: Composition-based stats. Identities = 76/355 (21%), Positives = 137/355 (38%), Gaps = 46/355 (12%) Query: 1 MKIKNILLTLCTSLLLTNVAAHA----------------KEVKIGMAIDDLRLERWQKDR 44 MK + L +LL + KE+KIG+A+ + Sbjct: 1 MKKFRWTMILSIIMLLISCGNGGEKPAAGGEAPAGGEAKKEIKIGVALYKFDDTFISSVK 60 Query: 45 DIF----VKKAESLGAKVFV--QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNV 98 D +K++ G K+ + G + TQ Q++ I +G DV+ + + S + Sbjct: 61 DAINEISDEKSKETGEKITINAVDGQGQQATQNDQVDTFITQGYDVIAVNMVDRTAASVI 120 Query: 99 VKEAKQEGIKVLAYDRMINDADID-----FYISFDNEKVGELQAKALVDIV--------- 144 +++A+ GI V+ ++R D+ +Y+ E+ G +Q + D Sbjct: 121 IQKAQAAGIPVVFFNREPVAEDMAKWDQLYYVGAKAEESGTIQGEVAADYFKANPDADKN 180 Query: 145 --PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIME 202 + Y ++ G P +A L +K L+ ++ + W N + M Sbjct: 181 KDGKIQYVILEGEPGHQDALLRTEYSIKALEAA--GFQVDKLASDTA-LWQRANGQEKMA 237 Query: 203 NALTANNNKIDAVVASNDATAGGAIQALSAQGLSGK---VAISGQDADLAGIKRIAAGTQ 259 ++A +KI+ V+A+ND A GAI+AL A G + + G DA + AG Sbjct: 238 AWISAFGDKIELVLANNDDMALGAIEALKAAGYLSDGKFIPVIGVDATAPAKDSLKAGLL 297 Query: 260 TMTVYKPITLLANTAAEIAVELGNGQEP--KADTTLNNGLKDVPSRLLTPIDVNK 312 TV +IA L + P K + +P + +T +V+K Sbjct: 298 YGTVLNDARGQGKGIFDIAYALAKKENPAEKVQGITDGKYLWIPYQKVTKENVDK 352 >UniRef50_A8F472 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Thermotoga lettingae TMO RepID=A8F472_THELT Length = 314 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 81/334 (24%), Positives = 143/334 (42%), Gaps = 29/334 (8%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAID------DLRLERWQKDRDIFVKKAESL 54 MK I L L ++L + ++G+AI + W + + A Sbjct: 1 MKKVLIFLLLIVTIL------SFAKFRVGVAIPAADHGWTGGMVWWAQY--AIKQYANDP 52 Query: 55 GAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDR 114 + ++ +A Q++Q++ ++ +G+D LVI PY L+ + +A ++GI + DR Sbjct: 53 DVEFYLVTAK-EPSEQIAQVQALLAKGIDALVINPYESAPLTPICVQAFRDGIFTIIVDR 111 Query: 115 MINDADIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLK 173 IN + + YI+ DN G L K + + + +GN ++ G P N K L+ Sbjct: 112 GINSEEYNVYIAGDNYMYGYLAGKYIAEKLGGKGNVVVIEGIPSTINT-ERVEAFKKALE 170 Query: 174 PYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQ 233 PY + +K++ Q W E A +IM+ LT N IDAV +D G + AL Sbjct: 171 PYPN---VKIIAQQP-GYWSREKAFEIMQTLLTKFPN-IDAVWTGDDDMLHGVLLALKQA 225 Query: 234 GLSGKVAISGQDADLAGIKRIAAGTQTMTV-YKPITLLANTAAEIAVELGNGQEPKADTT 292 G + + G + +K I G + V + + +TA +AV G+ + Sbjct: 226 GRDKNIVLVGGACEKNIVKMIMDGHPLIGVDFTYPPNMISTAINLAVMALKGEHL--NGF 283 Query: 293 LNNGLKDVPSRLL-TPIDVNKNNIKDTVIKDGFH 325 G +P +++ + V K N KD + Sbjct: 284 YQRG---IPRKIILSTETVTKENAKDYYFPESVF 314 >UniRef50_A6UE72 Monosaccharide-transporting ATPase n=13 Tax=Alphaproteobacteria RepID=A6UE72_SINMW Length = 310 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 69/297 (23%), Positives = 138/297 (46%), Gaps = 7/297 (2%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFV 60 MK+ +L+ T+ +L A+ A+ KIG+A+ +L+ + + + + K A G +V V Sbjct: 1 MKLSTLLVAATTASVLALPASAAEVKKIGLAVPNLQADFFNQIKLGVEKHAREKGLEVVV 60 Query: 61 QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD 120 A + TQ+SQ+++++ + +D + IP + + A++ GI V+ DR+ A Sbjct: 61 VDAKNDTNTQVSQVQDLMIQDIDAFIYIPAGAAAAAVPTRLAREAGIPVINVDRVPEGAP 120 Query: 121 IDFYISFDNEKVGELQAKALVDI-VPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSG 179 D +I+ ++ + K +++ G ++ G G + + ++ Sbjct: 121 GDTFIAGESVESAYAVCKFIIEKAGGSGKMAIIHGQKGTTPEVDRFTGCKRAID---ENK 177 Query: 180 KIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKV 239 ++++ QW + W + I +N L AN + I + D A GA +A+ LS KV Sbjct: 178 GVELIDQQWSNMWSADEGFSIAQNMLQANPD-ITIIFGQADGLAMGAAKAVDVANLSDKV 236 Query: 240 AISGQDADLAGIKRIA--AGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLN 294 I G D D++ ++ +A G T + + A E A+ + G++ + T N Sbjct: 237 IIGGYDGDVSALEYLARCKGPFIATATQSTQKMGVLAVESALAVAAGEKVEERQTPN 293 >UniRef50_C8P3T0 D-galactose-binding periplasmic protein n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P3T0_ERYRH Length = 360 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 69/325 (21%), Positives = 127/325 (39%), Gaps = 34/325 (10%) Query: 2 KIKNILLTLCTSLLLTNVAAHA----------KEVKIGMAIDDLRLERWQKDRDIFVKKA 51 K+ ++L +L L ++ K IG+AI R+ Sbjct: 3 KLSKLILVSLLALTLFGCSSKGGAEGNANEGGKTYNIGVAIYKFDDNFMTLYREELASYF 62 Query: 52 ESLG------AKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQE 105 + +G K+ +Q ++ Q QI N I +G D+++ + +++ AK + Sbjct: 63 KEVGEKDGNTYKLDIQDGKQDQANQTEQINNFIAQGKDLIIANMVDPTAAGSIINSAKAK 122 Query: 106 GIKVLAYDRMIND------ADIDFYISFDNEKVGELQAKALVDIVPQGN--------YFL 151 I V+ +R Y+ D + G +Q + ++ +G+ Y Sbjct: 123 EIPVVFINREPETQELEIWPGKTTYVGADATQSGTIQGYMIANLENKGDIDGDGSVSYIT 182 Query: 152 MGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNK 211 + G P + +AK +K L+ K + + W + NAL NK Sbjct: 183 LMGDPANVDAKQRTEYSVKGLEE--KGVKTNALAQPYQANWDTAKGQEFTANALEQFGNK 240 Query: 212 IDAVVASNDATAGGAIQALSAQGLS--GKVAISGQDADLAGIKRIAAGTQTMTVYKPITL 269 ++ V A+ND A GA+ A+ A G + + G DA I+ + G T TV Sbjct: 241 LEVVFANNDGMAVGAVTAIEAAGRKVGEDIFVVGVDAIPDAIELLKGGKLTGTVLNDHFN 300 Query: 270 LANTAAEIAVELGNGQEPKADTTLN 294 ++TA ++A+EL G++ A + Sbjct: 301 QSHTAVDVALELLQGKDVSAYYWHD 325 >UniRef50_C5RJ04 D-xylose ABC transporter, periplasmic substrate-binding protein n=1 Tax=Clostridium cellulovorans 743B RepID=C5RJ04_CLOCL Length = 247 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 88/244 (36%), Positives = 149/244 (61%), Gaps = 3/244 (1%) Query: 87 IIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVPQ 146 ++ + + +V+ + G+K++ Y+ +I + DID ++ F++ + G++Q + L+ VP+ Sbjct: 1 MVAVDVKTAGAMVEMVRNAGVKLVTYEALIINTDIDIFVGFNHLRAGQIQGRFLITKVPK 60 Query: 147 GNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALT 206 GNY +M + + G M + P V G IK+V + W P+ A MENAL Sbjct: 61 GNYIIMYADLPYDT--FLKDGAMDFITPLVIIGNIKIVAVGSIKDWSPKIASSFMENALI 118 Query: 207 ANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKP 266 + NNKIDA++A ND+ AG AI+ L QGL+GKV ++G DA+L+ I+RI GTQ MT++K Sbjct: 119 S-NNKIDAILAPNDSIAGVAIEVLQKQGLAGKVVVTGMDAELSAIRRIIKGTQAMTLFKD 177 Query: 267 ITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHK 326 A ++A++LGNG++ D + NG +PS L+TP+ V+K+NI + +IK G+ Sbjct: 178 TRESARKTIDVAIKLGNGEKVLTDEWMYNGKNHIPSILITPVFVDKDNIDEVLIKSGYLT 237 Query: 327 ESEL 330 + ++ Sbjct: 238 KEDI 241 >UniRef50_C4U114 Ribose-binding protein of ribose ABC transporter n=1 Tax=Yersinia kristensenii ATCC 33638 RepID=C4U114_YERKR Length = 322 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 82/320 (25%), Positives = 138/320 (43%), Gaps = 18/320 (5%) Query: 3 IKNILLTLCTSLLLTNVAAHAKE--VKIGMAIDDLRLERWQKDRDIFVKKAESLG-AKVF 59 + + + L T N A K+ V I ++ + ++ +A++LG K+ Sbjct: 8 MTTLAIALSTFAFSANAAPKGKDAPVTILVSALSYSFPHFVFLQEQLEAEAKTLGNVKII 67 Query: 60 VQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIND- 118 + Q++ IE I +GVD ++I P + L+ V++ A +EGI V+ DR +N Sbjct: 68 RSDGQLSAPKQIADIEAAIVQGVDGIIIAPADATALAPVLRTAIKEGISVVTIDRPVNGV 127 Query: 119 ADIDFYISFDNEKVGELQAKALVDIVPQGNYFL-MGGSPVDNNAKLFRAGQMKVLKPYVD 177 ++ ++ DN + Q +A+ + PQG + + G P D A G L + + Sbjct: 128 PEVIANVAADNLIGAQRQGEAVEKLFPQGATIINLQGIPGDKTANDRSKGVHDTLDKHPE 187 Query: 178 SGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSG 237 K V +Q + + L + EN LT N +VA ND +A GA QA+ A+GL G Sbjct: 188 L--YKFVAEQTA-RFNRDQGLSVTENLLTGLANPPTVIVAGNDDSALGAAQAVEARGLKG 244 Query: 238 KVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGL 297 K+AI G D +K + G T TV + A +I D Sbjct: 245 KIAIFGYDGSTDALKAVRDGVLTGTVDQYPGKQGREAVKI----------LTDYIRTGAR 294 Query: 298 KDVPSRLLTPIDVNKNNIKD 317 L++P+ + N+ D Sbjct: 295 PATVDVLVSPVAITSKNLND 314 >UniRef50_B1WQL3 Putative ribose ABC transporter n=1 Tax=Cyanothece sp. ATCC 51142 RepID=B1WQL3_CYAA5 Length = 380 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 68/318 (21%), Positives = 137/318 (43%), Gaps = 21/318 (6%) Query: 16 LTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSAN------GNEET 69 L++ + +I WQ+ A+ LG K V+ G+ + Sbjct: 68 LSHQGTATQPWQIAYLFKTRSDPFWQQMEQGVQTVAQELGIKTLVKFTEEKPNTLGDVKK 127 Query: 70 QMSQIENMINRG-VDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFD 128 Q+S I +I+ +D LVI P + L ++++A Q+GIKV+ D I+ I +++FD Sbjct: 128 QISTILELIDNNDLDGLVIAPEDSIQLVPIIEKATQQGIKVIVIDTPIDTDQILTFVTFD 187 Query: 129 NEKVGELQAKALVDIV-------PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKI 181 N + G++ + ++ + + N ++ GS + N R G ++ LK + + Sbjct: 188 NFEGGQILGEWVIQKLTQSSRRNNKINILILEGSLHEENTIERRQGFLEGLKRANKNYSL 247 Query: 182 KVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAI 241 +++ + D W + A I + L ID ++A++D A GA +A+ SG + I Sbjct: 248 EILDLKSAD-WETKKAKMITQAWLEKF-PTIDVIMAADDQMAVGASEAVQEANKSG-III 304 Query: 242 SGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVP 301 +G D G+ I G T+ + + ++ + ++ G + Sbjct: 305 TGFDGTPYGLNAIKTGQIDATINQLPRTQISLITQLMINSLEKEQTTLPLCQLIGQEQTE 364 Query: 302 SRLLTPIDVNKNNIKDTV 319 + LL + ++NI + + Sbjct: 365 NSLL----ITQDNINEAL 378 >UniRef50_B0URJ4 Monosaccharide-transporting ATPase n=6 Tax=Pasteurellaceae RepID=B0URJ4_HAES2 Length = 311 Score = 202 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 84/316 (26%), Positives = 145/316 (45%), Gaps = 23/316 (7%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFV 60 MK K +L LC LLLT+ A AK IG A + ++WQ V+ + V + Sbjct: 1 MK-KTLLAMLCGGLLLTSQAVIAKNYVIG-APMNSFADKWQTYLQDAVRDFDEKHDDVQI 58 Query: 61 Q--SANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIND 118 + +N + Q++ ++N I++ VD L+++P + V+ + AK+ GI ++ +R ND Sbjct: 59 KLADSNSDPNIQVNLVQNFIDQNVDALLVVPTDPTVVKRIGVLAKKAGIPLIVVNRKPND 118 Query: 119 A---DIDFYISFDNEKVGELQAKALVDIVPQGNY--FLMGGSPVDNNAKLFRAGQMKVLK 173 + ++ D + G +Q +V+ + N ++ G + G ++ Sbjct: 119 EHMQYVTSFVGSDEIEGGRIQGNFIVNTLAGKNAESLILLGPLGQDAVTKRTQGNEEIFA 178 Query: 174 PYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQ 233 + + IKVV Q W + L I EN L A N I+ +V++ND A GAI A Sbjct: 179 QHKN---IKVVSKQE-GRWERDRGLAIAENVL-AGNKGINVIVSNNDEMAIGAILATRKL 233 Query: 234 GLSGK-VAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTT 292 G+ + + I G DA ++ + G TV++ T AE+A G++ + Sbjct: 234 GIKDEDITIVGLDATPDALEYLGKG-LDATVFQSAQGQGYTGAEMAYLAAKGEKVPS--- 289 Query: 293 LNNGLKDVPSRLLTPI 308 +K VP L+TP Sbjct: 290 ----VKWVPFELVTPD 301 >UniRef50_Q3MB45 Periplasmic binding protein/LacI transcriptional regulator n=54 Tax=Bacteria RepID=Q3MB45_ANAVT Length = 343 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 78/300 (26%), Positives = 140/300 (46%), Gaps = 19/300 (6%) Query: 17 TNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLG---AKVFVQSANGNEETQMSQ 73 TN + K +G+ + DL + K+A+ +G +V V S+ + Q +Q Sbjct: 51 TNNGSPHKLRSVGVTLGDLSNPFFVVMAQGAEKEAKKIGGEDVRVTVVSSGYDLNQQFNQ 110 Query: 74 IENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVG 133 IEN + D+++I + + + V +A+Q G V+A D I +ADID ++ +N + G Sbjct: 111 IENFVAANTDLIIINAADSKGIRPAVDQARQAGKVVIAVDTAI-EADIDATVTTNNVQAG 169 Query: 134 ELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGW 192 E+ + + D + +GN ++ G PV + G +KVL Y D IK++ Sbjct: 170 EISCQYIADRLKGKGNVVIVNGPPV-TSVIQRVDGCLKVLAKYPD---IKLLSKDQNAEG 225 Query: 193 LPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIK 252 + L++M + L KIDAV A ND + G A + I G D I+ Sbjct: 226 SRDGGLRVMSDLLVTF-PKIDAVFAINDPSGVGVDLAANQA-KRQDFFIVGVDGAPEAIE 283 Query: 253 RIAAGT--QTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDV 310 IA+G T + + TA ++ ++ +G++P++ L +P++L+T +V Sbjct: 284 AIASGDSLYAATATQNPRGMTQTAIQVGNDILHGKKPESPNIL------IPAKLITKENV 337 >UniRef50_A1WJI7 Periplasmic binding protein/LacI transcriptional regulator n=102 Tax=Proteobacteria RepID=A1WJI7_VEREI Length = 358 Score = 200 bits (510), Expect = 4e-50, Method: Composition-based stats. Identities = 70/282 (24%), Positives = 129/282 (45%), Gaps = 9/282 (3%) Query: 17 TNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKK--AESLGAKVFVQSANGNEETQMSQI 74 K K+G A+ L+ E Q + K + K+ V + TQ +Q Sbjct: 44 ALAQQAKKTWKVGAAVYGLKAEFAQLWVNALKKHPLVKDGTVKLTVFDGKYDALTQNNQF 103 Query: 75 ENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGE 134 E MI + D ++ +P + Q ++ V +A + I V+ + +N + Y+ ++ G Sbjct: 104 ETMITQKYDGILFVPIDLQAGADAVSKAAEANIPVVGSNGRVNSDKLLSYVGSNDVIAGA 163 Query: 135 LQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWL 193 +QA+A+VD + +GN ++ G + R G + VL Y + +KV+ + W Sbjct: 164 MQAQAVVDAMGGKGNVVILEGPIGQSGQVERRQGNLSVLAKYPN---VKVL-EMKTANWS 219 Query: 194 PENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGK-VAISGQDADLAGIK 252 AL + EN LTA+ KI+ ++ ND A GAI+A+ A+GL K + +G D ++ Sbjct: 220 RAEALSLTENWLTAHAGKINGIIGQNDEMALGAIEAVKAKGLDPKTIPTAGIDGVSDAVR 279 Query: 253 RIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLN 294 + AG +V + + + A ++ + G K + + Sbjct: 280 AVKAGIM-ASVLQDASAQSQGALDVLLRKLIGASYKPRSAMW 320 >UniRef50_B4DBL5 Monosaccharide-transporting ATPase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBL5_9BACT Length = 328 Score = 200 bits (509), Expect = 5e-50, Method: Composition-based stats. Identities = 66/333 (19%), Positives = 127/333 (38%), Gaps = 29/333 (8%) Query: 1 MKIKNILLTLCTSLLLTNV---------------AAHAKEVKIGMAIDDLRLERWQKDRD 45 MK + + C + A + IG+++ L ++ D Sbjct: 1 MKHRLFIALACLLTVFAGCNKSENASTSTDTQPPTGSASKGTIGVSLLTLDNPFFKVIGD 60 Query: 46 IFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQE 105 V + + G V S + + Q +QI++ I + V +V+ P + + + V++EA Sbjct: 61 NIVSEGKKRGYDAVVVSGDKDVAKQSNQIKDFIVKKVSAIVLSPCDSKSIVPVIQEANAA 120 Query: 106 GIKVLAYDRMINDADI--DFYISFDNEKVGELQAKALVDIVPQ-GNYFLMGGSPVDNNAK 162 GI V D ++ + I+ DN G+ AKA+++ + + G + + + Sbjct: 121 GIPVFTVDIPCHEPGVKIATQIATDNYGGGKEAAKAMIEALGEAGGKIAILHFKQAESCQ 180 Query: 163 LFRAGQMKVLKPYVDSG--KIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASND 220 L G +++ + G K+ +V + G + K E+ L AN + + + A ND Sbjct: 181 LRVKGFREIIDAHNAEGKSKVDIVAELESGG-AKDQGYKAAEDTLQANPD-LHGIFAIND 238 Query: 221 ATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVE 280 A GA AL G + +V I G D G + I G + + + ++ Sbjct: 239 PAALGARAALEKAGKTDQVVIVGFDGQPEGKQAIKEGKIYADPIQFPDKMGAQIVDAIIQ 298 Query: 281 LGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKN 313 G+ +P+ L D K+ Sbjct: 299 QSKGETLPPQ-------MLIPTSLYKKADAEKD 324 >UniRef50_B9JQF4 Sugar-binding transcriptional regulator, LacI family n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JQF4_AGRRK Length = 337 Score = 200 bits (509), Expect = 6e-50, Method: Composition-based stats. Identities = 79/336 (23%), Positives = 144/336 (42%), Gaps = 28/336 (8%) Query: 1 MKIKNILLTLCTSLL------LTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVK--KAE 52 M + L T++L LT A+AK KI + L E D Sbjct: 1 MNMTKRALLGATTVLCLLGTALTGAPAYAKTFKIAAIVQSLNTEYNVLWADAAKSHPALA 60 Query: 53 SLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAY 112 A + V + TQ + + I D ++ IP + + ++ AK GI V Sbjct: 61 DGTATLTVLDGRQDVLTQSNLFDTAITEKYDAIIFIPVDIDAGNEPIERAKAAGIPVFGS 120 Query: 113 DRMINDAD-IDFYISFDNEKVGELQAKALVDIVPQ-GNYFLMGGSPVDNNAKLFRAGQMK 170 + +++ + D YI+ ++ + GE+ AKA++D + ++ G + G Sbjct: 121 NTVVSKTELYDAYINSNDVEAGEMLAKAVIDKAGKDAKVVVLEGMLGQSAQVQRLEGINN 180 Query: 171 VLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQAL 230 VLK + + ++ +Q W A+ +MEN LT++ +++ V+A ND A GAI+ + Sbjct: 181 VLKQ---NSGVTIL-EQNTANWSRAEAITLMENFLTSHGDQVQGVLAENDEMAVGAIEGI 236 Query: 231 SAQGLS-GKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQ--EP 287 GL K+ ++G D ++ + G QTM++ + + + A ++A+ G +P Sbjct: 237 RNHGLDPKKLPVAGVDGIKDALEAVKRGEQTMSILQDASGQSQGAIDLALSKLVGDTYKP 296 Query: 288 KADTTLNNGLK-----------DVPSRLLTPIDVNK 312 +A NG K VP +T +V+K Sbjct: 297 RAKVWDTNGGKLAWNGGKEEHYYVPWLAVTSDNVDK 332 >UniRef50_C3KN00 Periplasmic ribose-binding protein n=1 Tax=Rhizobium sp. NGR234 RepID=C3KN00_RHISN Length = 339 Score = 200 bits (509), Expect = 6e-50, Method: Composition-based stats. Identities = 77/328 (23%), Positives = 128/328 (39%), Gaps = 22/328 (6%) Query: 4 KNILLTLCTSLLLTN---VAAHAKEVK-IGMAIDDLRLERWQKDRDIFVKKAESLGAKVF 59 + I+L L S+ L V A A+E+K IG ++ +Q K A+ G KV Sbjct: 8 RRIVLGLIASVALAGSLAVPAQAQEMKTIGWSVAYFDHPVYQLMMKGAEKVADEAGCKVI 67 Query: 60 VQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDA 119 + Q S I+N I +GVD +++ P L VK+ GI ++ DR + Sbjct: 68 FADGKDDPSVQASHIDNFIAQGVDGIILTPTVSDPLIPAVKKVNDAGIPLVMADRRMQTH 127 Query: 120 ----DIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKP 174 + +S+D K G + + V + +GN ++ G+P + +V++ Sbjct: 128 GQPIKWEALVSWDMVKSGTIGGEQTVKAIGGKGNIVVVEGTPGAGSTIDRGNAFYEVIEK 187 Query: 175 YVDSGKIKVVGDQWVDGWLPENALKIMENALTANNN-KIDAVVASNDATAGGAIQALSAQ 233 Y D IK++ + ++ EN L +IDA+ D G +QA+ A Sbjct: 188 YPD---IKILAKIPA-NFNRAKGQEVTENILQRFKPGEIDAIYYMADEMTFGGLQAIKAA 243 Query: 234 GLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTL 293 G G+ I D + + A A A I ++ NG+ P Sbjct: 244 GRLGEFKIISVDGQKEAMDLLRAREIDYEAIFHPDDQA-VAVRILCDIVNGRTPDLANQT 302 Query: 294 NNGLKD-------VPSRLLTPIDVNKNN 314 G K +P T V+K+N Sbjct: 303 YEGRKMDLVEFEGMPWVRPTVYAVDKSN 330 >UniRef50_C5EU51 D-galactose-binding periplasmic protein n=4 Tax=Clostridiales RepID=C5EU51_9FIRM Length = 350 Score = 200 bits (508), Expect = 7e-50, Method: Composition-based stats. Identities = 86/343 (25%), Positives = 142/343 (41%), Gaps = 40/343 (11%) Query: 1 MKIKNI-LLTLCTSLLLTNVAAHAKE-----------VKIGMAIDDLRLERWQKDRDIFV 48 MK I LL +C + + +E ++IG+ + R Sbjct: 1 MKRNWIYLLAVCLGIGILIGFWQYRENEGQRQTKKNSIRIGVLLYRGDDTFIGTLRAGLE 60 Query: 49 KKAESL------GAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEA 102 KA+ K+ + + G++ TQ SQ+E +I+ G D L I + S ++ +A Sbjct: 61 DKAKEYEQKTGIKVKLDILDSKGSQNTQNSQVERLISLGCDALCINSVDRSSASIIIDKA 120 Query: 103 KQEGIKVLAYDRMINDADID-----FYISFDNEKVGELQAKALVDIVPQ--------GN- 148 G V+ ++R + D++ +Y+ D ++ LQ ALVD + GN Sbjct: 121 MDAGTPVVFFNREPVEEDMNRWEKLYYVGADAKESAVLQGDALVDAYRKDSRTLDANGNG 180 Query: 149 ---YFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENAL 205 Y L+ G ++ + ++ LK K+ G + W A +ME L Sbjct: 181 LVSYVLLEGETSHQDSLIRTEWSIQTLKDG-GVPLEKITGG--IANWDRSQASALMEQWL 237 Query: 206 TANNNKIDAVVASNDATAGGAIQALSAQGL-SGKVAISGQDADLAGIKRIAAGTQTMTVY 264 +I+ VV++ND A GAI A++ G+ + + + G D GIK + GT TV Sbjct: 238 KEYPGQIELVVSNNDDMALGAIDAMNRAGIGANSIKVVGIDGTPVGIKALEEGTLFATVE 297 Query: 265 KPITLLANTAAEIAVELGNGQEPKADTTLNNG-LKDVPSRLLT 306 A +IA L Q+PK+ L NG P R+LT Sbjct: 298 SDKERYAQAIFDIAWSLSLDQDPKSVVPLVNGKYYWCPQRVLT 340 >UniRef50_C6VSM5 Sensor protein n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VSM5_DYAFD Length = 904 Score = 200 bits (508), Expect = 7e-50, Method: Composition-based stats. Identities = 58/288 (20%), Positives = 113/288 (39%), Gaps = 13/288 (4%) Query: 18 NVAAHAKE-VKIGMAIDDLRLERWQKDRDIFVKK-AESLGAKVFVQSANGNEETQMSQIE 75 A ++ IG + E + D ++ A K+ + A+ N Q+ QIE Sbjct: 16 GCAGKQEDAYVIGFSQCTGDDEWRRAMLDGMQRELAFHNNTKLIFRDAHANSAVQVKQIE 75 Query: 76 NMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGEL 135 ++ G+ +L++ P L+ V+++A ++G+ V+ DR + Y+ DN +VG+ Sbjct: 76 ELLRNGIHLLIVSPNESDPLTPVIEKAYKQGVPVVVVDRRTSSPYYTAYVGGDNYQVGKT 135 Query: 136 QAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLP 194 + ++ G + G P + A G + L ++ + Q W Sbjct: 136 VGEYAAALLGGNGKMIEITGLPRSSPASDRHRGLVDALATRPSIRRVATLNGQ----WQK 191 Query: 195 ENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADL---AGI 251 + A + L + +D + A N+ A GA + + K+ + G D I Sbjct: 192 DIAKSELRKVLPRFPD-LDLIFAQNEVMAMGAREVCNDIFPDRKIRVIGVDGLPGQFGDI 250 Query: 252 KRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKD 299 + + G T T P AA +A+ + Q + + L + D Sbjct: 251 QMVYDGHITATALYPTG--GEEAARVAMNILQKQPYQKENLLQTAIID 296 >UniRef50_A1SYD2 Bifunctional carbohydrate binding and transport protein n=12 Tax=Proteobacteria RepID=A1SYD2_PSYIN Length = 312 Score = 200 bits (508), Expect = 7e-50, Method: Composition-based stats. Identities = 74/302 (24%), Positives = 139/302 (46%), Gaps = 11/302 (3%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVK--KAESLGAKV 58 M+ K + L S+ + + AK+ IG+ +++ ++ +Q DI +K + + Sbjct: 1 MQKKLAITGLAFSICFSTFS-FAKDYVIGVTQNNVGVDSYQTTYDIALKDTMTKYPNVEG 59 Query: 59 FVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIND 118 V A GN Q++Q++++I + VD +++ P NGQ L+ +V++AKQ GI V+ + I++ Sbjct: 60 IVLDAGGNVARQIAQVQDLIQQEVDAIILWPTNGQALTPIVRKAKQMGIPVIITNSNISE 119 Query: 119 AD---IDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKP 174 I + + G+ A+ + + + +G + G P A + G L Sbjct: 120 KGQEFITAFSGPNTITQGQYAAELMCEGLNGKGQVVQITGQPGYQTAINRQKGFEDSLA- 178 Query: 175 YVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQG 234 D + ++ Q D W E + ++MEN +T KID V A++D GA+ A+ Sbjct: 179 -ADCPGVSIIDSQPGD-WNREKSQRVMENFITRFGTKIDGVYAADDNMGIGALNAIKEAD 236 Query: 235 LSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLN 294 L + I G G I G+ +V + A A I +++ NG + + D + Sbjct: 237 LKN-IKIVGATNFAVGYDAIKEGSYYGSVVQSPVSDAIAALAITMKILNGDKVEKDNYFD 295 Query: 295 NG 296 Sbjct: 296 TP 297 >UniRef50_A6LC26 Sensor protein n=6 Tax=Bacteroidales RepID=A6LC26_PARD8 Length = 911 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 69/302 (22%), Positives = 128/302 (42%), Gaps = 19/302 (6%) Query: 5 NILLTLCTSLLLTNVAAHAKEVKIGMAIDDL-RLERWQKDRDIFVKKAESLGAKVFVQSA 63 + L LC + + K+ IG++ + + R RD+ V+ ++ V A Sbjct: 11 WLFLILCFA---CSPGKKEKKYVIGVSQCSMTDIWRQSMIRDMEVEALNHPEIELVVMDA 67 Query: 64 NGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDF 123 + + +TQ+SQI+ I + VD+L+I + ++ V EA + GI + DR IN + Sbjct: 68 SQDNDTQISQIKGFIKKKVDLLIISSNETEPVTPVAVEAYRAGIPTIILDRKINSDEYTT 127 Query: 124 YISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIK 182 YI DN ++G + ++ + + G ++A G + + + +K Sbjct: 128 YIGADNYEIGRSIGMYISSLIKGETTILEIWGRRGSSSATERHQGFVDAMSIDPN---VK 184 Query: 183 VVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQG--LSGKVA 240 + + W ENA + + + +D V A ND A GA +A+ + L G V Sbjct: 185 I--RELDGYWYKENAYEEV--LKLDSIEDVDIVFAHNDMMALGAREAIEERDSSLVGHVE 240 Query: 241 ISGQD---ADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGL 297 G D G++ +A G + Y P A ++A ++ +GQ L+ + Sbjct: 241 FIGVDGLLGGGLGVEAVAQGKLDASFYYPTG--GGVAIKVAWQILSGQAYTKKYALSTAM 298 Query: 298 KD 299 D Sbjct: 299 ID 300 >UniRef50_B0P8T4 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8T4_9FIRM Length = 333 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 65/284 (22%), Positives = 120/284 (42%), Gaps = 13/284 (4%) Query: 24 KEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVD 83 +++ +G + E + + A++ G K+ Q NG+ Q Q+E+ I +GVD Sbjct: 58 EQIVVGFSNWSRSFEFYVDLEKGMQEVADAQGVKLITQDPNGDLAAQTKQVEDFITQGVD 117 Query: 84 VLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDI 143 +V+ P + + Q GI ++ D + D+ +I+ DN G+L A+ + + Sbjct: 118 GIVLCPIDSNAAVTEAETINQAGIPLVTTDIAVAGGDVASHIASDNTLGGQLAAQFIGEQ 177 Query: 144 VPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMEN 203 + + +P + G + I++V Q + E L +MEN Sbjct: 178 LGGTGKVALINNPTITSLIERETGFTDTMAQKY--PDIEIVAVQSGES-KREKGLSVMEN 234 Query: 204 ALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGT-QTMT 262 L +N + + V A ND GA+QA+ A + I G DA +K I G+ + Sbjct: 235 ILQSNPD-VQGVFAVNDMMGLGALQAVQAAQRDD-IVIVGFDATEEAVKYIKEGSALKAS 292 Query: 263 VYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLT 306 V + L T E +++ G++ + + VP L+T Sbjct: 293 VAQNPVELGKTTMETMLKVIAGEQVEKN-------IPVPVELVT 329 >UniRef50_A6VWG6 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Proteobacteria RepID=A6VWG6_MARMS Length = 314 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 81/324 (25%), Positives = 125/324 (38%), Gaps = 23/324 (7%) Query: 1 MKIKNIL--LTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKV 58 MK K L T L L + + A I + ++ + KA+ LG Sbjct: 1 MKKKTFLKSCLAATLLTLASTSVLASNGLIAIITPSHDNPFFKAGAEGADAKAKELGYDT 60 Query: 59 FVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIND 118 V S +G+ Q IE I R +++ + ++ K+ GI YDR IN Sbjct: 61 LVASHDGDVNKQNQLIETAIARQAKAVILDNADADASIGSLERLKKAGIPAFLYDREINK 120 Query: 119 ADIDFY-ISFDNEKVGELQAKALVDIVPQGN-YFLMGGSPVDNNAKLFRAGQMKVLKPYV 176 I I +N + +L + +++ G Y + G D NA++ G +L + Sbjct: 121 TGIAVTQIVSNNFQGAQLAGEKFAELMGDGGEYVELLGPESDTNAQVRSEGFHDILDNFP 180 Query: 177 DSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS 236 + K+V Q W A ME+ L AN N I V+ ND+ A GA AL A G Sbjct: 181 E---FKMVARQSA-NWSQTEAFSRMESILQANPN-IKGVITGNDSMALGAEAALQAAGRK 235 Query: 237 GKVAISGQDADLAGIKRIAAG-TQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNN 295 V I G D I G T+ +P A AE A D + Sbjct: 236 D-VFIVGFDGLDYVRDSIIKGSNIKATIMQPAYAQAQRVAEQA-----------DLYIRT 283 Query: 296 GLKDVP-SRLLTPIDVNKNNIKDT 318 G +P +L+ + ++ +N K+ Sbjct: 284 GSTGLPEKQLMDCVLIDSSNAKNL 307 >UniRef50_Q28MQ8 Periplasmic binding protein/LacI transcriptional regulator n=14 Tax=Alphaproteobacteria RepID=Q28MQ8_JANSC Length = 343 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 74/317 (23%), Positives = 140/317 (44%), Gaps = 24/317 (7%) Query: 1 MKI-KNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLG-AKV 58 MK+ KN + L +AA + +G+ + L E +Q AE G ++ Sbjct: 38 MKLLKNTAAAVTALALSVGMAAAQDQPTVGLIMKSLANEFFQNMMVGAEAHAEERGDYEL 97 Query: 59 FVQSANG--NEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI 116 + E+Q++ +EN I +GVD +V+ P + + + ++ A + GI V+ +D + Sbjct: 98 LAVGMQNETDFESQINAVENFITQGVDAIVVAPADSRAMVRPLRRAMEAGITVINFDVAL 157 Query: 117 NDADID------FYISFDNEKVGELQAKALVDIVPQGN-YFLMGGSPVDNNAKLFRAGQM 169 + ++ ++ DN E+ AL + + +G ++ G+P +NA R G Sbjct: 158 DTGAMEQQGIELAFVGPDNRMGAEMAGNALGEALGEGGRVVIIEGNPGADNATQRRLGFE 217 Query: 170 KVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQA 229 + + ++++ + W E A ++ LTA+ + + V+A+ND+ A G I+A Sbjct: 218 DAIATH----GLELLESRTA-HWETEEANQVFAAMLTAHPD-LQGVMAANDSMAIGVIEA 271 Query: 230 LSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKA 289 L A G + + G DA A + I G TV + +A A ++A+E+ Sbjct: 272 LDAAGRDD-ILVVGFDAVPAVLPMIEDGRMLATVDQFGQAMAANAIDLALEVLE------ 324 Query: 290 DTTLNNGLKDVPSRLLT 306 G P L+T Sbjct: 325 TGVDLEGWVRTPIELVT 341 >UniRef50_B8H8H8 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8H8H8_ARTCA Length = 322 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 75/319 (23%), Positives = 132/319 (41%), Gaps = 24/319 (7%) Query: 7 LLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGN 66 L S T+ AK IG+ + DL+ D K A+ G K+ + + + Sbjct: 21 LTGCAGSSNATSSGEAAKTYNIGVVVLDLQDPDLAHMTDAMKKTADEKGVKLNITDSKKD 80 Query: 67 EETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI---NDADIDF 123 ++++Q+E+++ R VD +++ P +G N K I + +D Sbjct: 81 VGSELNQVEDLLTRQVDAVIMQPLDGDASQNAAKRVIAANIPLFILSTEFAEGSDVGYKS 140 Query: 124 YISFDNEKVGELQAKALVDIVPQ-GNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIK 182 YI D+ G++QA+ L ++P GN G + + G K + + K Sbjct: 141 YIGVDDTVAGQMQAEYLNKLMPNGGNLVFAAGVYGASWTDRRKNGFDKTI-----NENFK 195 Query: 183 VVGDQWVDGWLPENALKIMENALTANN-NKIDAVVASNDATAGGAIQALSAQGLSGKVA- 240 +V + G ++A + ME+ L +IDAVVA+ND A GA A++ G + + Sbjct: 196 IVAEFQAKG-SRDDAKRNMEDTLQRFPSGQIDAVVANNDEMAIGAASAIADAGRTAEFKA 254 Query: 241 ISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDV 300 + G D ++ I GT + TV + A E+ + NG TL Sbjct: 255 VVGVDGTEPALQDIEGGTMSATVRQDSAGQGVKAVEVVTDFLNGGNVDNRYTL------- 307 Query: 301 PSRLLTPIDVNKNNIKDTV 319 P L + K+N+ + + Sbjct: 308 PFTL-----ITKDNLSEFL 321 >UniRef50_C6JDF0 Monosaccharide-transporting ATPase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDF0_9FIRM Length = 333 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 63/292 (21%), Positives = 122/292 (41%), Gaps = 15/292 (5%) Query: 25 EVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDV 84 ++ +G A + + A+ G AN + T ++ IE+M+ + +D+ Sbjct: 49 DLTVGFAQSGNPNPWMVALTESMQQSADEYGVNYIYTDANDDMATHVANIEDMLAKDLDI 108 Query: 85 LVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIV 144 LVI P L V+ EA ++G+ V+ R + + D GE A+ + + + Sbjct: 109 LVIAPMEDTGLEAVLDEAAEKGVPVILSARTTQGEYVT-TVYSDQAWEGERCAELIGEKI 167 Query: 145 PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENA 204 P + G ++ G V+ +++V +Q + + A+ M N Sbjct: 168 PDAKVVELRGIEGTSSVAGREKGFRDVMAE--QYPDMEIVVEQTA-NFSRQEAMDAMANI 224 Query: 205 LTANNNK-IDAVVASNDATAGGAIQALSAQGLSG--KVAISGQDADLAGIKRIAAGTQTM 261 L A IDAV ND A GA+QA+ GL+ + + G D + + +G Sbjct: 225 LQAKGPDAIDAVYCHNDEMALGAVQAIKDAGLTPGEDIQVVGIDGQKEAWELVKSGEMLG 284 Query: 262 TVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKN 313 TV + T E+ ++ +G+ + +T VP +++T +V+++ Sbjct: 285 TV-QCSPKHGPTVFEVIQKILDGETVQKETI-------VPDQVITKENVDES 328 >UniRef50_C0B7M6 Putative uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0B7M6_9FIRM Length = 325 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 76/340 (22%), Positives = 139/340 (40%), Gaps = 34/340 (10%) Query: 1 MKIKNILLTLCTSLLLTNVAAHA---------------KEVKIGMAIDDLRLERWQKDRD 45 MK + + + + T++ T + +G A + K R Sbjct: 1 MKKRLLSILMVTAMCATMAVGCGTADDTKDSSSSSKGKSDYLVGFANNSDTYNYCAKFRS 60 Query: 46 IFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQE 105 E+ G + V A G+ Q QI++ I + +V+ I + ++ AK Sbjct: 61 YLKDATEAKGISITVTDAGGDTNVQNGQIDDFIVQNANVVSAISNDLDGSIPALEAAKDA 120 Query: 106 GIKVLAYDRMI---NDADIDFYISFDNEKVGELQAKALVDIVPQG-NYFLMGGSPVDNNA 161 G+ +++ + +D D Y+ NE G+ Q + L D P G + G+P D Sbjct: 121 GLPYVSFLTSVSGGDDYDGYIYVGSPNEDAGKAQGEYLCDAFPDGASILYFTGAPNDQQY 180 Query: 162 KLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDA 221 + G + LK + IK++ + V+ + + E++L + +KIDA+V ND Sbjct: 181 VDRKKGLEEALKK---NPNIKILDEYNVEN-SKDLGMSTAEDSLLSY-DKIDAIVCQNDD 235 Query: 222 TAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVEL 281 A G ++AL + G + + G D ++ I G TMT + A A+I +L Sbjct: 236 GALGVVEALKSAGKLDSIQVLGIDGSDDALQSIQDGEMTMTALQDAKAQAEAGADIFEKL 295 Query: 282 GNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTVIK 321 G +P +N +P ++ V K+N+ D + K Sbjct: 296 KKGTDPADIEDVN-----IPFKI-----VTKDNVADYLSK 325 >UniRef50_C9LWW5 Sugar ABC transporter, periplasmic sugar-binding protein n=2 Tax=Selenomonas RepID=C9LWW5_9FIRM Length = 347 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 68/295 (23%), Positives = 123/295 (41%), Gaps = 20/295 (6%) Query: 27 KIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLV 86 K+ A + + ++ F +KA+S G V A G+ Q+ Q+ I+ +V Sbjct: 70 KVIYANHNDDDAFAMQLKNTFAEKAKSAGLDVEFLDAKGDSNLQIDQLNEAISNKAAAIV 129 Query: 87 IIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVP- 145 ++ +G + V++A++ GI V+ +R +ND + + D+ + G +Q + + +P Sbjct: 130 LLAMDGTSIVPTVEKAREAGIPVVIMNRDVNDPKVIGSL-SDDREAGRMQGEFMASHLPP 188 Query: 146 QGNYFLMGGSPVDNNAKLFRAGQMKV-LKPYVDSGKIKVVGDQWVDGWLPENALKIMENA 204 + G + A G + L D +K++ W +K M Sbjct: 189 NAKVVYLMGESSLSVAVKRWEGFKEACLDKRPD---VKLLASVD-GSWSKAEGMKAMTLW 244 Query: 205 LTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVY 264 L+ +I+ VVA+ND A GAIQAL A ++G DA AG+ + AG + TV Sbjct: 245 LSFF-PEINGVVAANDEMALGAIQALKAANRLNGCLVTGVDATPAGLAAVEAGELSQTVK 303 Query: 265 KPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTV 319 + A A + +G+ P D+P + + N+ V Sbjct: 304 QDAEGQAAGAVTLVQGFLSGKAPTESL-------DIPF-----TSITRENVAQFV 346 >UniRef50_B8D164 ABC-type sugar transport system, periplasmic component n=6 Tax=Bacteria RepID=B8D164_HALOH Length = 308 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 58/279 (20%), Positives = 120/279 (43%), Gaps = 7/279 (2%) Query: 21 AHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINR 80 A A ++ IG ++ + + + + K A+ G ++ V AN + Q+S +E+ I R Sbjct: 24 ALADDITIGASLLTQQHPFYVQLKQAMEKAADDNGVELIVSIANQDLNKQISDVEDFIVR 83 Query: 81 GVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKAL 140 GVD +V+ P + + + + +AK+ GI V+ D ++D +++ DN G + + + Sbjct: 84 GVDAIVLSPVDSKGVVGAIIKAKRAGIPVITVDISAEGVEVDAHVATDNYYGGRIAGETM 143 Query: 141 VDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKI 200 ++ + PV + + AG + + Y I++V Q G AL Sbjct: 144 AKVLNGKGQVAIIDYPVVQSVRDRVAGFKEAVSKYP---GIEIVAIQP--GITRPEALNT 198 Query: 201 MENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGT-Q 259 +N L A+ ++D + D A ++ A+ + G+ V + G D + Sbjct: 199 AQNILQAH-PEVDGIFGFGDDAALASVVAVKSAGMEDDVKVIGFDGMEEARNAVKKEESF 257 Query: 260 TMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLK 298 V + + E A+ + G++ + + + GL Sbjct: 258 VAVVCQYPGEMGRLGLETALRVIKGEKVEKEIPVLPGLF 296 >UniRef50_B8H228 Inositol ABC transporter, periplasmic inositol-binding protein IbpA n=3 Tax=Caulobacteraceae RepID=B8H228_CAUCN Length = 326 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 69/272 (25%), Positives = 118/272 (43%), Gaps = 7/272 (2%) Query: 16 LTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIE 75 +T A E ++ ++ +DL + R +A LG KV V A N Q+S ++ Sbjct: 28 MTGCARGGAEAEVVVSFNDLSQPFFVAMRRELEDEAAKLGVKVQVLDAQNNSSKQISDLQ 87 Query: 76 NMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDF-YISFDNEKVGE 134 +G V+++ P + + L+ + ++G+ V++ DR I ++ DN G Sbjct: 88 AAAVQGAKVVIVAPTDSKALAGAADDLVEQGVAVISVDRNIAGGKTAVPHVGADNVAGGR 147 Query: 135 LQAKALVDIVPQG-NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWL 193 A +V P G ++ P +++ G L K+V +Q + Sbjct: 148 AMADWVVKTYPAGARVVVITNDPGSSSSIERVKGVHDGLA--AGGPAFKIVTEQTANS-K 204 Query: 194 PENALKIMENALTA-NNNKIDAVVASNDATAGGAIQALSAQGLSG-KVAISGQDADLAGI 251 + AL + +N LT+ + D ++ ND A GA++A+ A GL KV + G DA + Sbjct: 205 RDQALTVTQNILTSMRDTPPDVILCLNDDMAMGALEAVRAAGLDSAKVKVIGFDAIPEAL 264 Query: 252 KRIAAGTQTMTVYKPITLLANTAAEIAVELGN 283 RI AG TV + L TA AV+ Sbjct: 265 ARIKAGEMVATVEQNPGLQIRTALRQAVDKIK 296 >UniRef50_C6AR66 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM1325 RepID=C6AR66_RHILS Length = 333 Score = 198 bits (503), Expect = 2e-49, Method: Composition-based stats. Identities = 75/327 (22%), Positives = 130/327 (39%), Gaps = 15/327 (4%) Query: 2 KIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAES--LGAKVF 59 + I+ ++L A A ++ IG + A + Sbjct: 6 RRMLIISAGLATVLTAAPAFSADKIVIGFSQASSNSAHRNTMTKRNQAYAAEHFKDVDLI 65 Query: 60 VQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDA 119 V +A G Q+S +E+++ +G+ VL+I + ++ +K+ GI V+ +R + D Sbjct: 66 VTNAEGKSAKQISDVESLMVQGMKVLMISAQDSAAIAPTIKQVLAAGIPVITLERSL-DI 124 Query: 120 DIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDS 178 + ++ N+ +G L K + + + +GN + G P A G + + Sbjct: 125 PVTLHVGPHNKPIGTLAGKYIAEALKGKGNVVEIKGDPAVAPAVERHEGFAEAIA----G 180 Query: 179 GKIKVVGDQWVDGWLPENALKIMENALTANN-NKIDAVVASNDATAGGAIQALSAQGLSG 237 +IKV+ + D W E ALK ME+ L +I AV A ND A GA++A+ A G Sbjct: 181 TEIKVIAETHAD-WDQEKALKFMEDTLQRFPAGQIQAVYAHNDNMAFGALRAIQAAGRDK 239 Query: 238 K-VAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNG 296 + + I G D + A I+ +A G T T +A A L + Sbjct: 240 EGILIIGIDGENAAIRAVAKGDLTATFTYST--VAPEGVIAAHALATNDTAALEKLGTLT 297 Query: 297 LKDVPSRLLT--PIDVNKNNIKDTVIK 321 KD S + + K N + K Sbjct: 298 KKDDGSMEIEIASKMITKENAAEFFCK 324 >UniRef50_Q01TB6 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01TB6_SOLUE Length = 323 Score = 198 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 78/327 (23%), Positives = 126/327 (38%), Gaps = 30/327 (9%) Query: 1 MKIKNILLT-LCTSLLLTNVAAHAKEVKIGMAIDDLRL-ERWQKDRDIFVKK--AESLGA 56 MK + + T L +++LL K+ + +A E ++ ++ ++K A Sbjct: 1 MKRRLWMTTGLASAVLLAGCGGEVKKKQFVVAFSQANNAEPYRAAQNALMEKLFAAQPDV 60 Query: 57 KVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI 116 K+ + A + Q++Q+E I + D+L++ P L+ V+ +A + I V+ +R I Sbjct: 61 KLVISDAQQDNSKQVAQVETFIRQKPDLLIVAPNERAALTAVMGQAMEAKIPVICLERDI 120 Query: 117 NDADIDFYISFDNEKVGELQAKALVDIV------PQGNYFLMGGSPVDNNAKLFRAGQMK 170 + YI DN +G L + +V + P GN M G G + Sbjct: 121 LQPNYTSYIHSDNVAIGRLAGQFIVGHLTKKYGKPAGNVVAMRGLLGVEGEINRDRGAKE 180 Query: 171 VLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQAL 230 +L Y + IK+V D D W+ A M L A KID V ND A GA Sbjct: 181 ILDKYPE---IKIVADPVAD-WIQAKAKDRMTEVLRAQ-PKIDVVYGHNDPMAIGAYLGA 235 Query: 231 SAQGLSGKVAISGQD---ADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEP 287 G ++ G D GIK++ G T P L + A EI + Sbjct: 236 KELGREKEMIFVGVDGLGGPAGGIKKVMDGVLAATFVYP--LWVDKAVEIGTRILR---- 289 Query: 288 KADTTLNNGLKDVPSRLLTPIDVNKNN 314 G +L + V N Sbjct: 290 ------EPGFVPAKDYVLESVMVTTEN 310 >UniRef50_A8RKK5 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RKK5_9CLOT Length = 350 Score = 198 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 62/301 (20%), Positives = 126/301 (41%), Gaps = 21/301 (6%) Query: 22 HAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKV--FVQSANGNEETQMSQIENMIN 79 + ++ + I+ + K E K+ + + TQ+SQ+EN I Sbjct: 63 SGEPAEVSVIIETFDNTFASFVMNAMKKYEEEHKDKIHITYLDSKQDANTQISQVENQIL 122 Query: 80 RGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKA 139 G ++ + + + +V+ K+ G+ ++A++R+ + D ++ D G L A+ Sbjct: 123 NGTQAIICLAVDAKQSEPIVRACKEAGVPLIAFNRIFENCD--SFVGADGAVAGSLLARF 180 Query: 140 LVDI-VPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENAL 198 + +GN ++ G N + R ++ L ++ + + W + AL Sbjct: 181 TGEKTGGKGNVAIVNGIMGQENQFIRRDAIVETLGEMYPDMQVVI---EGAGDWKRDKAL 237 Query: 199 KIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGT 258 +++E L + IDA++ ND A G A+ G S + + G + D GI + G Sbjct: 238 QLVETWLQS-GTDIDAILCLNDDMAMGTQLAVEQAGKSDDIIVCGVNGDPDGINAVRDGK 296 Query: 259 QTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDT 318 TV++ A A E A++ +G++P++ +P L V +N+ D Sbjct: 297 IAATVFQNPDRQAEEALEAALQYIHGEKPESK-------IMIPFEL-----VTADNVDDY 344 Query: 319 V 319 V Sbjct: 345 V 345 >UniRef50_A4F8A2 Binding protein/LacI transcriptional regulator n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4F8A2_SACEN Length = 334 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 75/308 (24%), Positives = 114/308 (37%), Gaps = 26/308 (8%) Query: 18 NVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESL-GAKVFVQSANGNEETQMSQIEN 76 + IGM+ +L + + K AE + V A + Q+S +EN Sbjct: 41 ACKGPDSKYTIGMSQANLAEPYRVRMDEDIRKAAEKVPQFDVQFADAAKDNSKQVSDVEN 100 Query: 77 MINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQ 136 + + VD+L+I P L++VVK+A EGI V+ DR + YI DN ++G Sbjct: 101 FMTKKVDLLMISPNEAAPLTDVVKKAYNEGIPVVVLDRKVEGEAFTTYIGADNVQIGRQA 160 Query: 137 AKALVDIV--PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLP 194 + + + G + G A G M+ + KI+VV + W Sbjct: 161 GEYFKNTLLPQGGKIVQLKGLSGSTPAAEREKGFMEGIA----GSKIEVVDTADGE-WER 215 Query: 195 ENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADL---AGI 251 + M+ L A+ + I AV A ND A GA A A G + G D GI Sbjct: 216 SVGQQKMDALLKAHPD-IQAVYAQNDPMAEGAWLAAQAAGRKD-LKFVGIDGLPIESGGI 273 Query: 252 KRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVN 311 K + G + T P A E A +L +P + L V Sbjct: 274 KAVEQGRLSATNLYPTG--GEEAVEAARKLLIDCQPVPKE-----------QTLPTELVT 320 Query: 312 KNNIKDTV 319 + N Sbjct: 321 RENAAQVY 328 >UniRef50_A8RZI4 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RZI4_9CLOT Length = 347 Score = 197 bits (501), Expect = 5e-49, Method: Composition-based stats. Identities = 63/289 (21%), Positives = 128/289 (44%), Gaps = 16/289 (5%) Query: 26 VKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVL 85 K G A + + ++ + + G ++ V A + + Q+S +E+++ +G+D+L Sbjct: 68 YKFGFAATTMNNPFFHAIQEAIEEVVDENGDELIVIDAQNDAQKQISMVEDLLTQGIDLL 127 Query: 86 VIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD-IDFYISFDNEKVGELQAKALVDIV 144 + P + + + +++ + G+ V+ +D + D D ++ I DN GEL A+ ++ + Sbjct: 128 FLCPIDSASIKSSLEQCGKAGVPVVNFDTDVYDVDLVNTIIVSDNYYAGELVAEDMMKKL 187 Query: 145 PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENA 204 P+G+ + SP + G Y K+V + G +L I E+ Sbjct: 188 PEGSKVCILTSPSAEACIKRQNGFKDKADGY-----FKIVSEIDGKG-DTATSLGIAEDV 241 Query: 205 LTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVY 264 L N + A A ND +A G +QAL +Q + V + G D G + I+ GT T Sbjct: 242 L-QGNPDLGAFYAINDPSAIGCVQALESQKKTD-VLVYGVDGQPMGKQAISEGTMEATAA 299 Query: 265 KPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKN 313 + + + A ++ +G+ + + VP+ L+ +V + Sbjct: 300 QSPINIGKESVAAAYKILSGESVEKNIL-------VPTFLIDKNNVTEY 341 >UniRef50_C9MXF0 Putative uncharacterized protein n=1 Tax=Leptotrichia hofstadii F0254 RepID=C9MXF0_9FUSO Length = 328 Score = 197 bits (500), Expect = 6e-49, Method: Composition-based stats. Identities = 74/338 (21%), Positives = 136/338 (40%), Gaps = 27/338 (7%) Query: 1 MKIKNILLTLCTSLLLTN------------VAAHAKEVKIGMAIDDLRLERWQKDRDIFV 48 MK + L + ++L A ++KI + + E W+ Sbjct: 1 MKKLLLFLVVFAAVLSCGKSEDKKDAGAGKSANSGDKIKIELVSKGYQHEFWRSVEAGAK 60 Query: 49 KKAESLGAKVFVQSANGNEE--TQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEG 106 K E LG +V E Q+ +EN IN+ V L I + L+ V K+A Sbjct: 61 KAGEELGVEVNFIGPEKETEIGKQVGMVENAINKKVSALGIAALDPDALAVVAKKAMDAK 120 Query: 107 IKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFR 165 I V+ +D + +I+ DN+ G + + L ++ +G ++ +P A Sbjct: 121 IPVVTFDSNVKGDITSSFIATDNKVAGAMAGEQLAKLINGKGKVAIVSHNPGTTTAIERE 180 Query: 166 AGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGG 225 AG + L Y D IK++ Q+ DG AL I + + AN + I + +N+ + G Sbjct: 181 AGFREALAKYPD---IKILNTQFSDG-DKSKALAITLDIINANPD-IAGIYGTNEPSIFG 235 Query: 226 AIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQ 285 + + +GL+GKV + G D+ K + G + V + + + +L G+ Sbjct: 236 IAKGVEEKGLTGKVVLVGIDSSEDLAKFLEKGVISGLVIQDPYNMGYQTVQQLYKLSKGE 295 Query: 286 EPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDG 323 + + D + L+T ++N +I + G Sbjct: 296 KVEK-------RIDTGAILVTKENINNPDITKKMFPFG 326 >UniRef50_A5ZV14 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZV14_9FIRM Length = 490 Score = 197 bits (500), Expect = 7e-49, Method: Composition-based stats. Identities = 85/341 (24%), Positives = 145/341 (42%), Gaps = 31/341 (9%) Query: 18 NVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENM 77 KI + + D + W +D + E G + A+ + Q+SQI+ M Sbjct: 82 ASETEENREKIAVLLPDEQN--WTRDAKELEVQFEEDGYDPILLYADNDSSKQVSQIQQM 139 Query: 78 INRGVDVLVIIPYNGQVLSNVVKEAKQE--GIKVLAYDRMINDAD-IDFYISFDNEKVGE 134 V +VI P + L++V+ + K I V++YD +I + D I +Y++F +VG+ Sbjct: 140 AAEEVSAMVIAPVDPYGLADVLADVKDAEIEIPVISYDDLIMNTDGIKYYVTFGGRQVGQ 199 Query: 135 LQAKALVD---------IVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKI---- 181 + AK ++D GS D A G M+ L+PY+D G + Sbjct: 200 MIAKQIIDSEELDKVQEAKESKTIEFFMGSLDDTQALFLYNGVMETLQPYIDDGTLICKS 259 Query: 182 --KVVGDQWVDGWLPENALKIMENALTANNNK---IDAVVASNDATAGGAIQALSAQGL- 235 D + W E A M + LT D + D A G +AL G Sbjct: 260 GKTSFDDTGILRWSSEIAKTRMTDILTEYYPDGAVPDIICTGFDDAAMGTEEALEEAGFV 319 Query: 236 ---SGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQ-EPKAD- 290 ISG + G++RIA G QT +++ LA+ E+ +G+ +P+ + Sbjct: 320 PGTENWPLISGAGCNEEGVRRIAEGKQTFSIFMDRRELADQCEEMVNIYLHGEDDPEVND 379 Query: 291 -TTLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 +NG+K + S L P ++ N + +I +G++ E E+ Sbjct: 380 YEQYDNGIKIIASYLCEPQLIDGENY-EILIDNGYYTEDEV 419 >UniRef50_B0P6G6 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B0P6G6_9FIRM Length = 355 Score = 196 bits (499), Expect = 8e-49, Method: Composition-based stats. Identities = 64/333 (19%), Positives = 123/333 (36%), Gaps = 35/333 (10%) Query: 10 LCTSLLLTNVAAHAKE------VKIGMAIDDLRLERWQKDRDIFVKKAES------LGAK 57 C LL + A E ++IG+ + + A++ + Sbjct: 21 FCCLLLPSGCADKPSESMTPDPIRIGVTLYRQSDTFISLLASDLLDCAKARETQDNVKIT 80 Query: 58 VFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIN 117 + + GN+ TQ Q++ + +G D + + + S ++ +A+ I V+ ++R Sbjct: 81 LNILDGTGNQGTQNEQVDRFLAQGYDAICVNEVDRTAASVIIDKARAADIPVIFFNREPV 140 Query: 118 DADID-----FYISFDNEKVGELQAKALVDIVPQG------------NYFLMGGSPVDNN 160 D+ +Y+ D + G++Q + +VD+ + Y ++ G P + Sbjct: 141 GEDMQRWQNVYYVGSDPREAGDMQGRIVVDLYDENPASVDRNGDGRIQYVILEGEPGHQD 200 Query: 161 AKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANN--NKIDAVVAS 218 A L + L ++ + + W A M L ++I+ + + Sbjct: 201 ATLRTESCIAALTSA--GIDVEKLASEPA-NWQRAQASAKMAQWLADEELRDRIEVIFCN 257 Query: 219 NDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIA 278 ND A GAI A A +S I G DA + I G+ TV A ++A Sbjct: 258 NDDMALGAIDAYHAAEISELPVIVGIDATPPALMAIQDGSLAGTVRNDAQGQAQAIFDLA 317 Query: 279 VELGNGQEPKADTTLNNG-LKDVPSRLLTPIDV 310 L G P+ + G P ++T +V Sbjct: 318 YALSTGANPQEAVPMLEGQYVWAPHSIVTIGNV 350 >UniRef50_C2KYA7 Possible periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Oribacterium sinus F0268 RepID=C2KYA7_9FIRM Length = 281 Score = 196 bits (499), Expect = 9e-49, Method: Composition-based stats. Identities = 82/299 (27%), Positives = 132/299 (44%), Gaps = 23/299 (7%) Query: 28 IGMAIDDLRLERWQKDRDIFVKKAESLGAK---VFVQSANGNEETQMSQIENMINRGVDV 84 + + + + E + K+AE LG + + TQ+SQIE + GVD Sbjct: 1 MALFMSHMTNEFVKTLSSSVQKEAEELGYTGDSFKIYDGKNDVATQVSQIEQAVTLGVDG 60 Query: 85 LVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADI-DFYISFDNEKVGELQAKALV-D 142 ++I P + + VK+A++ G+KV+ ++ I+D + D ++ DNE G K ++ D Sbjct: 61 IIIEPVSTDGIVKAVKDAEKVGVKVVILNQRISDQNAADTFVGADNESTGAALMKKVMED 120 Query: 143 IVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIME 202 + +GN + G + G VL Y D +KV+ D W AL + E Sbjct: 121 LDGKGNIVELLGPMGSDGQVGRSKGFDSVLAEYPD---VKVIASDSAD-WDTAKALTLTE 176 Query: 203 NALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMT 262 N LT++ I AVVA ND A GA QA+ GL+ K+ + G DA G+ I G T T Sbjct: 177 NWLTSS--DIQAVVAQNDGMAVGAAQAIKEAGLTDKIKVYGVDATSDGLNAIVNGGMTGT 234 Query: 263 VYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTVIK 321 V + +A++ L GQ + N + K N+ + + K Sbjct: 235 VSQGTENQGKISADLCSNLIYGQSVPKEVIATN------------VVYTKENVNEILKK 281 >UniRef50_C3MI97 Putative solute-binding component of ABC transporter n=1 Tax=Rhizobium sp. NGR234 RepID=C3MI97_RHISN Length = 327 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 65/321 (20%), Positives = 137/321 (42%), Gaps = 13/321 (4%) Query: 8 LTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVK--KAESLGAKVFVQSANG 65 + T LL ++AA ++++I E + + ++ V Sbjct: 11 IAASTMLLGADLAAAQEKIRIAALSFGEAGEYMKAWSTEIQNHPAVKEGKVEITVFDGKY 70 Query: 66 NEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYI 125 + Q +QI+ + + + +++ P++ + + + +A + + V+ + + I Sbjct: 71 DPLIQANQIDTALTQQFNAIIMAPFDLEASAPAIDKAAEAKVPVIVSALKTSSKNYTASI 130 Query: 126 SFDNEKVGELQAKALVDIVPQ-GNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVV 184 D+ + G + A+ + +P GN LM G + RAG L+ + +K++ Sbjct: 131 IVDDREGGRIIAEEMAKRLPSGGNLVLMEGPIGQSAQIERRAGVDAGLEAH---SNLKLL 187 Query: 185 GDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS-GKVAISG 243 D+ W +MEN L+A ++I+ V+A ND A GAI+A+ A + KV + Sbjct: 188 ADKS-GNWSRAEGQALMENWLSAYPDQINGVLAENDEMALGAIEAMKAANVDLSKVPVIA 246 Query: 244 QDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKD---- 299 D + + G +T+YK A ++A+ G E K + + NGL + Sbjct: 247 IDGIPDAKRAVENGEMAVTLYKYARAEGQGAVDLALRQVIGTEYKPQSEVWNGLMEWKDG 306 Query: 300 -VPSRLLTPIDVNKNNIKDTV 319 ++ + ++K+N+K + Sbjct: 307 TQKDYVVPWLILDKDNVKKYM 327 >UniRef50_C0C0J1 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C0J1_9CLOT Length = 333 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 75/344 (21%), Positives = 136/344 (39%), Gaps = 36/344 (10%) Query: 1 MKIKNI----LLTLCTSLLLTNVAAHAKE-----------VKIGMAIDDLRLERWQKDRD 45 MK + + LT+C SL + K+ VK+ +I ++ W+ Sbjct: 1 MKKRFLAAFLCLTMCLSLAACSSGEKEKKGSDSGDKKEESVKVAFSIPEMFSTFWEACWY 60 Query: 46 IFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQE 105 F K+A+ G + + G+ E Q+SQ+++ + +GVD + + P + + + + Sbjct: 61 GFEKQAKEYGWEATLLDPQGDLELQISQLQSQVTKGVDAIGVAPIENEAIGPALTTVNEA 120 Query: 106 GIKVLAYDRMINDADIDFYISFDNEKVGELQAKALV-DIVPQGNYFLMGGSPVDNNAKLF 164 G+ V DR + ++ + DN K GE A+ LV D + ++ G D Sbjct: 121 GVPVFCVDRR-GEGEVVSTLETDNVKAGEAMAEQLVKDYGEDVDVLIIQGVLSDTPTLDR 179 Query: 165 RAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAG 224 G VL+ Y + I +VG+ + E AL +N L N +D + DA Sbjct: 180 TQGVKNVLEKYEN---ITIVGEPSAGEYSNEAALATTKNFL-ETNPDLDVIFTCTDALVP 235 Query: 225 GAIQALSAQGLSGK------VAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIA 278 G + AL G +GK V I D +K I GT T + + Sbjct: 236 GIVAALKEAGKTGKVGEENHVGIYSVDGAGEVLKLIEDGTVDGTFSQYPIQFGIDTVKSM 295 Query: 279 VELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNK--NNIKDTVI 320 +G + + N ++T +++K +++ +I Sbjct: 296 KTYLDGGKVEEKVYYNGD-------VVTDENIDKLHDDLWGFII 332 >UniRef50_B9XK02 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=bacterium Ellin514 RepID=B9XK02_9BACT Length = 330 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 65/326 (19%), Positives = 128/326 (39%), Gaps = 18/326 (5%) Query: 3 IKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVK---KAESLGAKVF 59 ++N+L + A K I + E WQ +K + + G KV Sbjct: 5 LRNLLTCALFLSSICLSCAADKSYTIAVIPKGTTHEYWQCIHAGAIKAQRELQEKGIKVD 64 Query: 60 VQSA----NGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRM 115 + + + Q+ +EN + R V +V+ P + Q + V A + I V+ +D Sbjct: 65 LIWKGPLREDDRDQQIQVVENFMTRRVSGMVLAPLDNQAMVAPVNNAIRAKIPVVIFDSA 124 Query: 116 INDADIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKP 174 + +++ DN K G+L A+ + ++ +GN L+ + + + AG M LK Sbjct: 125 LKTDKYVSFVATDNYKGGQLAAERMGQLLEGKGNVILLRYAVGSASTEEREAGFMDTLKS 184 Query: 175 YVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQG 234 IKV+ G E A + +N L ++++ + + +AL G Sbjct: 185 KF--PNIKVISSDQHAGATRETAYQASQNLLNRFGHEVNGIFCPCEPPTVAMAKALRDIG 242 Query: 235 LS-GKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTL 293 + GKV + G DA + + G V + + V+ G++ + Sbjct: 243 KAGGKVKMVGFDAGSQSVIDLKNGDVQGLVVQNPLRMGYLGVITMVQHLQGEKVEK---- 298 Query: 294 NNGLKDVPSRLLTPIDVNKNNIKDTV 319 D +++TP ++ + IK+ + Sbjct: 299 ---RIDTGVQIVTPENMEQAGIKELI 321 >UniRef50_B5GKD2 D-ribose ABC transporter permease protein n=1 Tax=Streptomyces sp. SPB74 RepID=B5GKD2_9ACTO Length = 432 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 69/311 (22%), Positives = 126/311 (40%), Gaps = 20/311 (6%) Query: 11 CTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQ 70 C+ + + +GMA L + +A+ G +V A G+ Sbjct: 132 CSEDGAASGGKGDGDYTVGMANFTLSGPYFVGMDKAVKARAKKKGVEVVSTDAGGDAAKL 191 Query: 71 MSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNE 130 S +E+++++ VD ++I + V+ K G + DR +I DNE Sbjct: 192 ASNVEDLLSKNVDAVIISGGPLESAPAVLNALKSAGKPAILVDRKFRSGTYASWIGPDNE 251 Query: 131 KVGELQAKALVDIVPQ-GNYFLMGGSPVDNN-AKLFRAGQMKVLKPYVDSGKIKVVGDQW 188 +G + L + + L+ G P DN+ G K L D+ I++V Sbjct: 252 AIGRQDGEFLAAKLGKDATVALIKGGPADNSIGLARTTGVKKAL----DAAGIRMVEGPD 307 Query: 189 VDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADL 248 W + L +ME+ L A++ +DAV NDA GA +A+ G ++ ++G D Sbjct: 308 YGNWASDGGLTVMESLL-ASHKDLDAVFCENDAMCLGAQRAVKDAGREKEIVLAGVDGQA 366 Query: 249 AGIKRIAA-GTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTP 307 ++ IAA G +T + + + AV++ +G++P+ DT +++ Sbjct: 367 EALQAIAAGGNYLVTGLNDADQIGSLGLDRAVDILDGKKPEKDTVVDSPQ---------- 416 Query: 308 IDVNKNNIKDT 318 V K N Sbjct: 417 --VTKENAAKY 425 >UniRef50_C8Q2Z4 Sugar ABC transporter, periplasmic sugar-binding protein n=1 Tax=Pantoea sp. At-9b RepID=C8Q2Z4_9ENTR Length = 308 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 70/296 (23%), Positives = 138/296 (46%), Gaps = 21/296 (7%) Query: 26 VKIGMAIDDLRLERWQKDRDIFVKKAESL-GAKVFVQSANGNEETQMSQIENMINRGVDV 84 +++G++I + + R ++ A+ + + G + Q+SQ+++ IN VDV Sbjct: 21 IQVGVSIAQMDDVFLSRLRGYLIEHAKQYPDMTLQFEDGQGAVDKQLSQVQSFINGKVDV 80 Query: 85 LVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIND---ADIDFYISFDNEKVGELQAKALV 141 +++ P + Q N+ A++ + ++ +RM +D D YI D + G LQ L Sbjct: 81 IIVNPVDTQGTKNMSDAARKAKVPLIYLNRMPSDSKMGDGISYIGSDEIEAGRLQMGYLA 140 Query: 142 DIVPQG---NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENAL 198 D+V N +M G ++ + G +V+ + + + VV + W+ E+ + Sbjct: 141 DMVKDRKNVNIAIMKGLLSNDATRFRTQGAKEVIAKHPN---MHVVMEDTAK-WMREDGM 196 Query: 199 KIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS--GKVAISGQDADLAGIKRIAA 256 +M N + KID + A+ D A GA A+ + GL+ + + G D G++ I + Sbjct: 197 NLMNNWIL-TGQKIDILSANADEMAIGAAMAIKSNGLNIGKDILVGGTDGGPNGLQAIKS 255 Query: 257 GTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNK 312 G T+TV++ A A ++A + G+ K + +P +L+TP + K Sbjct: 256 GLLTVTVFQDAKSQAFGAIDMAEKAAKGETLKD-------INFIPFQLVTPQNYQK 304 >UniRef50_A8SGU5 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SGU5_9FIRM Length = 356 Score = 195 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 70/311 (22%), Positives = 125/311 (40%), Gaps = 31/311 (9%) Query: 28 IGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVI 87 IG+ I R + +G V + ++ TQ QI + +GVDVLVI Sbjct: 61 IGVCIYQFADNFMTLYRADLEGYLKDMGYSVTIMDGKNDQNTQTEQINTFLQQGVDVLVI 120 Query: 88 IPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADID------FYISFDNEKVGELQAKALV 141 P +V G ++ +R ++ +D Y+ D + G Q + ++ Sbjct: 121 NPVQTTSAQTIVDTVSPSGTPIVFINREPEESVLDSYKGKCCYVGADARQSGTYQGELIL 180 Query: 142 DIVPQGN--------YFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWL 193 + QG+ Y + G P + +A+ +K L D+ K +++D W Sbjct: 181 ETETQGDINGDGKITYIMCKGDPENIDAQYRTEYSIKAL---TDANKEVECLYEYLDNWD 237 Query: 194 PENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS--GKVAISGQDADLAGI 251 A + + NAL+ +KI+ V +NDA A GA+Q++ G + V + G DA + + Sbjct: 238 QTTAQQDVANALSQYGDKIEVVFCNNDAMALGALQSIQQAGRTVGKDVYLVGVDALVEAV 297 Query: 252 KRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVN 311 + + G T TV A AAE G++ + ++ + V Sbjct: 298 QNVVDGNMTGTVLNDDVGQATKAAEATKLFVEGKDVEKYYWVDY------------VKVT 345 Query: 312 KNNIKDTVIKD 322 K+N + +D Sbjct: 346 KDNASQYLKED 356 >UniRef50_D2PNL9 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Actinomycetales RepID=D2PNL9_9ACTO Length = 335 Score = 195 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 80/297 (26%), Positives = 119/297 (40%), Gaps = 19/297 (6%) Query: 19 VAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESL-GAKVFVQSANGNEETQMSQIENM 77 + IGM+ ++ Q+ D A + +V A + Q++ +EN Sbjct: 40 CKGADGKYVIGMSQANVAEPYRQRMDDDIKAAAAEVPQFEVKFADAAQDNAKQVADVENY 99 Query: 78 INRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQA 137 I + +D+L+I P + L+ VVK+A +GI VL DR + +I DN ++G Sbjct: 100 ITQQIDLLIISPNEAKPLTAVVKKAYDQGIPVLVLDRKVEGDAYTGFIGGDNVQIGTEAG 159 Query: 138 KALVDIV--PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPE 195 K + + V GN + G G +K + K+KVV D WL E Sbjct: 160 KYVAEKVLPNGGNVVEIKGLAGATPQAERNQGFATGIKA---NPKVKVVATASGD-WLRE 215 Query: 196 NALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADL---AGIK 252 M+ L A N KID V A ND A GA A A G ++ G DA GIK Sbjct: 216 KGQAQMDALLKA-NPKIDVVYAHNDPMAEGAYLAAKAVGREKEMKFIGIDALPIPSGGIK 274 Query: 253 RIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPID 309 + G T T P A A +L D + +P+RL+ + Sbjct: 275 AVEQGRLTATFTYPTN--GKEAIAAAKKLL------VDCGTIEKTQTLPTRLIDKTN 323 >UniRef50_C7G6I7 D-galactose-binding periplasmic protein n=3 Tax=Clostridiales RepID=C7G6I7_9FIRM Length = 367 Score = 195 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 75/337 (22%), Positives = 137/337 (40%), Gaps = 30/337 (8%) Query: 9 TLCTSLLLTNVAA---HAKEVKIGMAI----DDLRLERWQKDRDIFVKKAESLGA--KVF 59 L S+++ K +KIG+++ D E + D KK E G + Sbjct: 33 ILVMSVVIGGCGGREDAKKSIKIGISVYDQYDTFVSEMMKDFNDYATKKEEETGVAINID 92 Query: 60 VQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDA 119 +A+ ++ TQ SQ+ENMI G DV+ + + + ++ A++ I V+ ++R + + Sbjct: 93 TYNASASQSTQNSQVENMITEGCDVICVNLVDRTDPTAIIDLAEKNNIPVIFFNRELVEE 152 Query: 120 DID-----FYISFDNEKVGELQAKALVDIV---------PQG--NYFLMGGSPVDNNAKL 163 D++ +Y+ + G +Q + + G Y ++ G +A + Sbjct: 153 DLERWTRLYYVGAQAFESGIMQGELAAEAFLTDQSLDKNGDGIFQYVVLEGEAGHQDAIV 212 Query: 164 FRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATA 223 + + +DSG + W A M ++ + I+ V+A+ND A Sbjct: 213 RTEYSVSTM---IDSGVEVEKLGYAIANWNRAQAQTKMAQLMSQFGDSIELVIANNDDMA 269 Query: 224 GGAIQALSAQGLSGK--VAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVEL 281 GAI AL A GL+ A+ G D G++ + TVY A+ +A EL Sbjct: 270 LGAIDALKASGLTKDEWPAVIGIDGTDVGLEAVKNKEMIGTVYNDKEGQADAMLNLAYEL 329 Query: 282 GNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDT 318 G + ++ +P +T DV+ DT Sbjct: 330 STGSDLSDLNLIDGKYIRLPYARVTCDDVDSYMEGDT 366 >UniRef50_B8HJG2 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HJG2_ARTCA Length = 319 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 79/308 (25%), Positives = 134/308 (43%), Gaps = 17/308 (5%) Query: 6 ILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANG 65 + L C+S A K KIG+ + D+ + + A S+GA Q A Sbjct: 20 LSLAACSSGDTQPAAKPKKIEKIGLMVQDMSNPFFSAMDKGAKEAAASIGATANTQDAQL 79 Query: 66 NEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYI 125 + Q +QI+ I +GV+++VI + + ++ AKQ GI V+A D AD + Sbjct: 80 DLANQNTQIDTFIQQGVNLIVISAVDENGIQPAIERAKQAGIIVIAVDTPAKSAD--AVV 137 Query: 126 SFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVV 184 D + GE + L + + +GN L+ G+P+ + G V+K + IKVV Sbjct: 138 MTDAVQAGEKSCQYLFEQMGGKGNVLLVDGTPL-QTIRDRITGCNNVVKKFP---GIKVV 193 Query: 185 GDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQ 244 G Q + L + + LTA + + + ND +A GA+ A+ +G V ++G Sbjct: 194 GQQASKN-DRASGLAVTTDMLTATPD-VQGIFGMNDPSALGAVLAVQQAHKAGTVKVTGV 251 Query: 245 DADLAGIKRIAA-GTQTM-TVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPS 302 D + + G+ M T + + A E+A + + + P T L +PS Sbjct: 252 DGSPEAVAELKQSGSPFMGTATQNPAEMVRKAVEVAQNIIDNKPPAETTIL------IPS 305 Query: 303 RLLTPIDV 310 L+T V Sbjct: 306 ELVTRDTV 313 >UniRef50_P39265 D-allose-binding periplasmic protein n=33 Tax=Bacteria RepID=ALSB_ECOLI Length = 311 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 74/316 (23%), Positives = 132/316 (41%), Gaps = 19/316 (6%) Query: 2 KIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQ 61 K L+L+ A A E + + L W + +A++LG V + Sbjct: 3 KYLKYFSGTLVGLMLSTSAFAAAEY--AVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF 60 Query: 62 SA--NGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIN-- 117 ++ G+ ++Q+ E++ N+ + P + L V A ++GI ++ D I+ Sbjct: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 Query: 118 -----DADIDFYISFDNEKVGELQAKALVDIVP--QGNYFLMGGSPVDNNAKLFRAGQMK 170 +++ +++ DN VG A ++D + G ++ G + + + R G + Sbjct: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 Query: 171 VLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQAL 230 K + +IK+V Q D W AL + N L N N I A+ +ND A G QA+ Sbjct: 181 AFKK---ASQIKLVASQPAD-WDRIKALDVATNVLQRNPN-IKAIYCANDTMAMGVAQAV 235 Query: 231 SAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKAD 290 + G +GKV + G D K + AG T TV + + T ++ V+ + Sbjct: 236 ANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPL 295 Query: 291 TTLNNGLKDVPSRLLT 306 K V S L+T Sbjct: 296 DKAPE-FKLVDSILVT 310 >UniRef50_B5J4J1 Putative uncharacterized protein n=1 Tax=Octadecabacter antarcticus 307 RepID=B5J4J1_9RHOB Length = 353 Score = 194 bits (493), Expect = 4e-48, Method: Composition-based stats. Identities = 97/298 (32%), Positives = 163/298 (54%), Gaps = 7/298 (2%) Query: 6 ILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERW-QKDRDIFVKKAESLG--AKVFVQS 62 + ++ TS LL A A+++ + + + + RW Q+D FV + KV V + Sbjct: 10 LATSVATSALLGAGVASAEDM-VALLLPENVNPRWEQQDAAAFVATMARIAPEIKVEVFN 68 Query: 63 ANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADID 122 AN + Q Q E + +G VL++IP +G+ + + A +EG+ +AYDRMIN + Sbjct: 69 ANNDTSVQQRQAEQALTQGAKVLIVIPIDGESSAIIADTAAEEGVPTIAYDRMINSLNTT 128 Query: 123 FYISFDNEKVGELQAKALVDIVPQGN-YFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKI 181 F++ D E +G QA +++ G+ + ++ GSP D NA + GQ++ L P +SG Sbjct: 129 FWVQADLEGMGYDQAMHIINNTRDGDTFVMLKGSPTDPNAAVIHNGQLRALTPLYESGAR 188 Query: 182 KVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAI 241 + + W +GW P A + M+ ALT +N + VV+SND AG AI A+ QG++G V + Sbjct: 189 VMGYENWTEGWDPTIARRSMDQALTLLDNGVQGVVSSNDGNAGAAIAAMEEQGMAGTVPV 248 Query: 242 SGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPK--ADTTLNNGL 297 SG D + + + G QT ++P+ +A AA+++V L NG++ A T+ NG+ Sbjct: 249 SGLDCTIQAQQLMLLGLQTQCGWRPLEDMAAAAAQVSVRLVNGEDFSDLAPQTVENGV 306 >UniRef50_Q5L7F9 Sensor protein n=5 Tax=Bacteroides RepID=Q5L7F9_BACFN Length = 917 Score = 193 bits (492), Expect = 5e-48, Method: Composition-based stats. Identities = 70/313 (22%), Positives = 129/313 (41%), Gaps = 23/313 (7%) Query: 1 MKIKNI-----LLTLCTSLLLTNVAAHA---KEVKIGMAIDDLRLERWQKDRDIFVKKAE 52 MK N+ LL S+ L++ K+ IG + R ++ ++ + Sbjct: 1 MKNTNLFRLAFLLFAGLSIFLSSCQPKEEGDKKYVIGFSQCTSDSWREAVLLEMQIEASN 60 Query: 53 SLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAY 112 ++ V +A N Q+SQI +I++ VDVL+I P +++V EA ++GI + + Sbjct: 61 YRNVELVVYNAMDNSSRQVSQIRKLISQNVDVLIISPNEAVPITDVAVEAYRKGIPTIIH 120 Query: 113 DRMINDADIDFYISFDNEKVGELQAKALVDIVPQG-NYFLMGGSPVDNNAKLFRAGQMKV 171 DR I + I +N +G + + +P + G + A G + Sbjct: 121 DRKIQSDEYTVSIGANNYNIGSAIGEYINGQLPPNSKILEIWGLEGSSPAMERHDGFIDH 180 Query: 172 LKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALS 231 L+ + +V G W +A + A ID V A ND A A + Sbjct: 181 LRSDKNFQVTQVFGK-----WHYNSAYDAVNRL--ATFADIDLVYAHNDVMALAARDVIM 233 Query: 232 AQG-LSGK----VAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQE 286 + +SGK + I G D AG++ +A + P + ++A+++ NG++ Sbjct: 234 KRDSVSGKRIRFIGIDGVYGDGAGLQAVADEKLEASFQYPTG--GAISIQVAMQIINGEK 291 Query: 287 PKADTTLNNGLKD 299 K + LN + + Sbjct: 292 VKKNYVLNTAIIN 304 >UniRef50_B0URZ9 Monosaccharide-transporting ATPase n=2 Tax=Gammaproteobacteria RepID=B0URZ9_HAES2 Length = 311 Score = 193 bits (492), Expect = 6e-48, Method: Composition-based stats. Identities = 71/316 (22%), Positives = 141/316 (44%), Gaps = 21/316 (6%) Query: 2 KIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQ 61 + K + L L+ +V+ ++ E + + L W ++ +A++LG V + Sbjct: 3 RFKTLKSCLAILGLVCSVSVYSAEY--AVILKTLSNPFWVAMKEGIENEAKALGVDVDIF 60 Query: 62 SA--NGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIN-- 117 ++ G+ ++Q+ E++IN+ + P + L +A ++GI ++ D I+ Sbjct: 61 ASPSEGDYQSQLQLFEDLINKNYKGIAFAPLSPANLVMPAAKAYRKGIYLVNLDEKIDIK 120 Query: 118 -----DADIDFYISFDNEKVGELQAKALVDIVPQ--GNYFLMGGSPVDNNAKLFRAGQMK 170 +++ +I+ DN VG A+ +VD + G ++ G + + + R G + Sbjct: 121 NLQKAKGNVEAFITTDNVAVGGKAAQFIVDKLGSEGGEVAIIEGKAGNASGEARRRGARE 180 Query: 171 VLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQAL 230 V +V S IK+V Q D W AL + N L+ N N + A +ND A G QA+ Sbjct: 181 V---FVKSSSIKLVASQPAD-WDRIKALDVATNVLSRNPN-LKAFYVANDTMAMGVAQAV 235 Query: 231 SAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGN-GQEPKA 289 G GK+ + G D K ++ T T+ + ++ ++ V+ G++ Sbjct: 236 INAGKQGKILVVGTDGVPEARKMVSERKLTATIAQDPAMIGAKGLKLLVDAARAGKQIPV 295 Query: 290 DTTLNNGLKDVPSRLL 305 D + ++ V S L+ Sbjct: 296 D--VEPKIETVDSILI 309 >UniRef50_B2IIE3 Periplasmic binding protein/LacI transcriptional regulator n=11 Tax=Rhizobiales RepID=B2IIE3_BEII9 Length = 314 Score = 193 bits (492), Expect = 6e-48, Method: Composition-based stats. Identities = 71/327 (21%), Positives = 135/327 (41%), Gaps = 25/327 (7%) Query: 3 IKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLG-AKVFVQ 61 +K+I + L+ A+ IG+++ + R +A +G + ++ Sbjct: 1 MKSIFTAAVLAALMAGTASAE---TIGVSMQNFDDNFQTLLRQGLQARASQVGGVTLQIE 57 Query: 62 SANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIND--- 118 A + Q++Q+ N I VD ++I + S + A++ GI ++ + + Sbjct: 58 DAQADIARQLNQVNNFIAARVDAIIITLTDTSAASGITAAAQKAGIPLVYLNLEPENINR 117 Query: 119 -ADIDFYISFDNEKVGELQAKALVDIV------PQGNYFLMGGSPVDNNAKLFRAGQMKV 171 Y+ G L A+A ++ Q +++ G ++ + + Sbjct: 118 LPKNQAYVGSKETDAGRLGAEAACQLLKKKGKAGQAQIYILMGDLAHQASRDRTSAVKET 177 Query: 172 LKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALS 231 L G + D+ W+ NA+ + N +T IDA+ A++D A GAIQAL Sbjct: 178 LAAGECKG--VTIADERSAAWMRTNAMDVTTNWIT-TGRPIDAIFANSDEMAIGAIQALK 234 Query: 232 AQGLSG-KVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKAD 290 A G+S V + G +A G+ + G +TV++ + +A + AV L G+ Sbjct: 235 AAGVSKNDVIVVGVNAAQDGLVAMEDGDLHVTVFQNAKGQSASALDAAVALARGKSVDRQ 294 Query: 291 TTLNNGLKDVPSRLLTPIDVNKNNIKD 317 VP L+TP ++ K N K+ Sbjct: 295 VM-------VPFELVTPENMAKYNNKN 314 >UniRef50_A0JVZ4 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Arthrobacter sp. FB24 RepID=A0JVZ4_ARTS2 Length = 318 Score = 193 bits (491), Expect = 7e-48, Method: Composition-based stats. Identities = 91/311 (29%), Positives = 149/311 (47%), Gaps = 21/311 (6%) Query: 5 NILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSAN 64 +I LT C + + AA + +KIG+ + + +Q++ +S+GA+V Q AN Sbjct: 23 SIGLTGCAT---ASGAAGDRPMKIGVTVANSTNPFFQQESKTAESYGKSVGAEVLSQVAN 79 Query: 65 GNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFY 124 + +TQ +QI+ I GV +VI + + VK A GI V+ D +A ++ Sbjct: 80 EDVQTQSNQIDQFITAGVKFIVIDAADTDGVGPAVKRAVSAGIPVIGVDNQSKNATVN-- 137 Query: 125 ISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKV 183 I+ DN++ GE+ ++L D + +G ++ G+PV + G +L Y D IK+ Sbjct: 138 ITTDNKQAGEISCRSLADKLGGKGKIAILNGTPV-SAVDDRVTGCKGILGQYPD---IKI 193 Query: 184 VGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISG 243 V DQ + ++AL I + LTAN + +D A ND +A G A +G S V I+ Sbjct: 194 VADQRGEN-SRDSALPIATDILTANPD-LDGFFAINDPSAVGVQLAAEQKGAS--VVITS 249 Query: 244 QDADLAGIKRIAA-GTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPS 302 D + IAA G T T + L A ++ + + NG+EP L VP+ Sbjct: 250 VDGASSATDAIAAGGLITATAAQDPAALMRQAIDLGISIVNGKEPDQKVIL------VPT 303 Query: 303 RLLTPIDVNKN 313 L+ +V K Sbjct: 304 ELVDASNVAKY 314 >UniRef50_B7CDT0 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CDT0_9FIRM Length = 326 Score = 193 bits (490), Expect = 8e-48, Method: Composition-based stats. Identities = 64/296 (21%), Positives = 117/296 (39%), Gaps = 18/296 (6%) Query: 24 KEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVD 83 + KIG + + + + G ++ + + + Q QI +I + VD Sbjct: 42 EPRKIGATYMTYNNTFYSVINEEISRILKEHGDQLIALDSAMSLKKQKEQIHYLIEQQVD 101 Query: 84 VLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIN-DADIDFYISFDNEKVGELQAKALVD 142 +VI P + + L + +KEA + I V+ D + + +I + I DN G AK ++ Sbjct: 102 AIVIAPVDYEGLEDSLKEAYRNRIPVIVVDTEVKHNKNITYSIVSDNYDAGVQCAKDMMR 161 Query: 143 IVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIME 202 + N L+ S + L G ++ + KVV DG L E A+ ME Sbjct: 162 KLDHANIVLLQHSTT-RSGYLRIKGFEDTIQS---NENYKVVKRMECDGQL-EVAMPKME 216 Query: 203 NALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMT 262 + + + D V+ ND +A GA+ ALS+ + + G D + + G T Sbjct: 217 SFI-EEGIEFDVVMCLNDPSAMGAMAALSSNNILKDKYVYGIDGTPEAKEMVVEGKMAAT 275 Query: 263 VYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDT 318 V + A E+ +L + + K ++ + K N++D Sbjct: 276 VAQSPKTFGKKAGEVIYKLFSQETIKNKNEMS-----------PVQIITKENVQDY 320 >UniRef50_Q883G4 Ribose ABC transporter, periplasmic ribose-binding protein n=4 Tax=Pseudomonas RepID=Q883G4_PSESM Length = 310 Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 80/295 (27%), Positives = 136/295 (46%), Gaps = 18/295 (6%) Query: 23 AKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGV 82 AKE+ IG+A+ +L+ + + + + + ++ G K+ A GN TQ+SQIE++I R + Sbjct: 26 AKELTIGLAVANLQADFFNQIKQSVEAEGKARGVKIITVDAQGNSSTQVSQIEDLITRQI 85 Query: 83 DVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVD 142 D L+ IP VK AK GI V+A DR DA D +I+ D+ + A+ + Sbjct: 86 DALIYIPAGATAAGVPVKAAKAAGIPVIAVDRNAPDAPGDTFIASDSVAGAKALAEYVGK 145 Query: 143 IV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIM 201 + +G ++ G G + LK + +KVV +Q + W + + Sbjct: 146 VTDGKGRIAILQGQLGTTPENDRAKGFQEGLKGFP---GLKVVAEQPAE-WAQDKGFAVA 201 Query: 202 ENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTM 261 ++ L + N I DA A GA QA+ LS V + G D D+AG+K +A+G Sbjct: 202 QDLLQRDPN-ITVFFGRADAMALGAAQAVKVANLSQPVVVVGFDGDVAGLKAVASGVLQA 260 Query: 262 TVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIK 316 T+ + + A A++L G+ + +LL + K+N+ Sbjct: 261 TMTQQTQKMGRMAVASALDLKAGKAVPKE------------QLLETVLTTKDNVA 303 >UniRef50_A1TPE5 Periplasmic binding protein/LacI transcriptional regulator n=5 Tax=Bacteria RepID=A1TPE5_ACIAC Length = 322 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 67/284 (23%), Positives = 109/284 (38%), Gaps = 14/284 (4%) Query: 24 KEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVD 83 K + +G + E + + A G ++ A +E Q+ I + I + VD Sbjct: 30 KPIVLGFSQVGAESEWRTANTESIKSAARDAGIELKFSDAQQKQENQIKAIRSFIAQRVD 89 Query: 84 VLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYI---SFDNEKVGELQAKAL 140 V+ P V++EAK I V+ DR +N D Y+ D + G + L Sbjct: 90 VIAFSPVVESGWEPVLREAKAAKIPVVLTDRAVNTKDTSLYVTFMGSDFVEEGRKAGRWL 149 Query: 141 VDIVPQG----NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPEN 196 V+ + N + G+ A + G +V+K K K++ Q D + Sbjct: 150 VEKMKDAKGDVNIVELQGTVGSAPAIDRKKGFEEVVKA---DPKFKIIRSQTGD-FTRAK 205 Query: 197 ALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS--GKVAISGQDADLAGIKRI 254 ++ME L A KI+ + A ND A GAIQA+ GL + I DA + + Sbjct: 206 GKEVMEAFLKAEGRKINVLYAHNDDMAIGAIQAIEEAGLKPGKDITIISIDAVKGAFEAM 265 Query: 255 AAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLK 298 AG +TV LL ++ G+ G+ Sbjct: 266 MAGKLNVTVECSP-LLGPQLMAAVKDIKAGKTVPKRIVTEEGIF 308 >UniRef50_A6W806 Periplasmic binding protein/LacI transcriptional regulator n=9 Tax=Actinomycetales RepID=A6W806_KINRD Length = 362 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 70/295 (23%), Positives = 131/295 (44%), Gaps = 20/295 (6%) Query: 23 AKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGV 82 K++++G+++ D+ ++ AE+ G ++ SAN + TQ SQ++ +N GV Sbjct: 49 PKKLRVGVSVYDMSS-FITAGKEGMDAYAEAKGIELLWNSANLDVNTQASQVDQYVNAGV 107 Query: 83 DVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVD 142 D ++++P L V AK GI +LA + +N DI + D+ GE Q + + D Sbjct: 108 DAIIVVPVQADSLQPQVASAKAAGIPLLAVNAELNSTDIAGNVQPDDVAAGEAQMQMMAD 167 Query: 143 IV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIM 201 + +G ++ G + G VL Y D I+V+ W + A+ + Sbjct: 168 AIGGKGGIVVLQGPLGQSGELNRTKGIENVLAKYPD---IEVLAKDTA-NWKRDEAVNKV 223 Query: 202 ENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTM 261 +N ++A +I VVA ND GA+QAL G++ + + G D G+ + +G Sbjct: 224 KNWISAFGARITGVVAENDDMGLGALQALKESGVT--LPVVGIDGIEDGLNAVKSGEFIG 281 Query: 262 TVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIK 316 T+ + T+ + +A + NG++ + + K N+ Sbjct: 282 TMLQNGTVELSAGLAVAAAIANGEDVNTEPVYK------------MPKITKENVD 324 >UniRef50_B9JQE2 D-ribose-binding periplasmic protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JQE2_AGRRK Length = 334 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 74/312 (23%), Positives = 133/312 (42%), Gaps = 15/312 (4%) Query: 21 AHAKEVKIGMAIDDLRLERWQKDRDIFVKK-AESLGA-KVFVQSANGNEETQMSQIENMI 78 A K VK+G A+ L+ E Q K A + G ++ V N + TQ SQ + M Sbjct: 27 AADKPVKVGAAVYGLKNEYAQIWAAEIKKHPAFANGIAELTVFDGNYDHATQASQFDLMA 86 Query: 79 NRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAK 138 + DV + IP + V+ +A + + V+ + ++ +I D+ G+ +A+ Sbjct: 87 TQHYDVAIYIPIDSYAAKGVIHKAALKNLPVVGSNGPAKSDELVSFIGSDDVAAGQYEAE 146 Query: 139 ALVDIVP-QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENA 197 L + +GN ++ G + +L G K L D+ K V ++ W A Sbjct: 147 TLFKAIGDKGNIVVLIGPEGNLGQELRTEGNKKAL----DANKDITVLERKTANWSRSEA 202 Query: 198 LKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGK-VAISGQDADLAGIKRIAA 256 + +M+N LT++ KI+ V+A ND GAI A+ A G+ K + + G D ++ + + Sbjct: 203 MVLMQNWLTSHKGKINGVLAQNDEMGLGAIAAMKAAGIDPKTIPVVGIDGVTDAVRAVQS 262 Query: 257 GTQTMTVYKPITLLANTAAEIAVELGNG-------QEPKADTTLNNGLKDVPSRLLTPID 309 G +++ + A A +IA+ G + K + G + Sbjct: 263 GDMILSIRQDAQTQAQGAVDIALRRVIGDSYQPLAECWKKYPQMAWGNGTDKLYSVPWTY 322 Query: 310 VNKNNIKDTVIK 321 V K N + + K Sbjct: 323 VTKENAAEFLQK 334 >UniRef50_C2KUT6 Galactoside ABC superfamily ATP binding cassette transporter, binding protein n=3 Tax=Clostridiales RepID=C2KUT6_9FIRM Length = 384 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 71/324 (21%), Positives = 130/324 (40%), Gaps = 38/324 (11%) Query: 19 VAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAK---VFVQSANGNEETQMSQIE 75 ++ + K+G+ I R S G K + + ++ TQ +QIE Sbjct: 72 MSGDFSDKKVGVCIYQFSDNFMTLFRTELENYLVSKGFKKENIKIMDGANDQATQTNQIE 131 Query: 76 NMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADID---------FYIS 126 N I VDVL++ P N + + + + GI ++ +R + + Y+ Sbjct: 132 NFITDKVDVLIVNPVNSSSAATITDKVQAAGIPLVYINREPDQDEEKRWEEKNWDVTYVG 191 Query: 127 FDNEKVGELQAKALVDIV---------PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVD 177 D + G Q + + + + +Y ++ G P + +A+ +K L+ D Sbjct: 192 CDARQSGTFQGEIIASVGMDKLDMNGNGKVDYIMIKGDPENIDAQYRTEFSVKALQ---D 248 Query: 178 SGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS- 236 +G D+ V W A ++ NAL N I+ V +ND+ A GA+QA+ A G + Sbjct: 249 AGMEVNKLDEQVGNWDQALAQSLVANALAKNGKDIEVVFCNNDSMALGALQAIQAAGRTV 308 Query: 237 -GKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNN 295 + + G DA + + AGTQT TV+ ++ A + A+ G+ Sbjct: 309 GKDIYLVGVDALEEACQNVLAGTQTGTVFNDFLTQSHAAGDAAINYLGGKGNDH------ 362 Query: 296 GLKDVPSRLLTPIDVNKNNIKDTV 319 + V K+N +D + Sbjct: 363 ------YIGCDYVKVTKDNAQDVL 380 >UniRef50_A6C460 Ribose ABC transporter (Ribose-binding periplasmic component) n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C460_9PLAN Length = 321 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 66/294 (22%), Positives = 119/294 (40%), Gaps = 21/294 (7%) Query: 29 GMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVII 88 G + + + + K+ E+ G ++ + A N Q + + ++I + V + + Sbjct: 43 GASFQTMNNPFFVDLGEGLKKELEANGDRLVILDAQFNSLKQKNDLSDLILQNVAGIFVN 102 Query: 89 PYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD---IDFYISFDNEKVGELQAKALVDIVP 145 P N + L + EA ++ + ++ D + AD I ++ DN + GEL A+AL + P Sbjct: 103 PVNWEGLKGSLLEANRKKVPIIIVDAPVKKADEELIVCTVASDNVRAGELAAQALAKVNP 162 Query: 146 QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENAL 205 + ++ V+ AG L+ + + +K++ Q G E A +M + L Sbjct: 163 KARLVVL-HLSVNKACIDRVAGFKTELEKHPE---MKILDVQEAQG-TTEGARPVMRD-L 216 Query: 206 TANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYK 265 +DAV A ND A G I AL + +V I D AGIK I AG T + Sbjct: 217 IGRYPDLDAVFAINDPNALGVISALDSANKLDQVTIVTVDGSQAGIKAIQAGKLHSTSAQ 276 Query: 266 PITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTV 319 + AAE + G+ + D + + N + + Sbjct: 277 FPREIGKIAAEKMLAHLKGEPVEKDVK------------VRVELITAENAEQYL 318 >UniRef50_A5KK65 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5KK65_9FIRM Length = 343 Score = 192 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 75/350 (21%), Positives = 141/350 (40%), Gaps = 39/350 (11%) Query: 1 MKIKNIL---LTLCTSL-LLTNVAAH----AKEVKIGMAIDDLRLERWQKDRDIFVKKAE 52 MK K +L + LC + LL + +V +G+ D + F ++ Sbjct: 1 MKKKKLLAAAIVLCMVIQLLCACGKQKISMSDKVYVGVTCYDQNDTFLSELLVCFKEELN 60 Query: 53 SL---GAK--VFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGI 107 L G + V V++A G++ TQ Q++ +IN G +VL + + S ++ AK+ + Sbjct: 61 HLNKNGVETTVTVKNAAGSQRTQNDQVKELINAGCNVLCVNLVDRADPSEIIDVAKEHDV 120 Query: 108 KVLAYDRMINDADID-----FYISFDNEKVGELQAKALVDIV-----------PQGNYFL 151 ++ ++R D+ +Y+ D ++ G LQ + V+++ + Y + Sbjct: 121 PIIFFNREPVAEDMRQWDRLYYVGADAKQSGVLQGELAVEMIRQNSQIDHNKDGKIQYVV 180 Query: 152 MGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNK 211 + G +A + + L + +++ + Q W A ME L NK Sbjct: 181 LEGEAGHQDAIIRTENAVDTLNK--NGIELEKLSYQIA-NWNRAQAQNRMEQMLGQYKNK 237 Query: 212 IDAVVASNDATAGGAIQALSAQGLSGK--VAISGQDADLAGIKRIAAGTQTMTVYKPITL 269 I+ V+A+ND A GA+ A + G D G+K + + TVY Sbjct: 238 IELVLANNDDMALGALDAYKNLNYTEALLPVFIGIDGTDMGLKAVEDSSMAGTVYNDKEG 297 Query: 270 LANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTV 319 A A+++ L G+E + N +P V K N+ + + Sbjct: 298 QARAIAKLSAALVIGKEAEEIKFTNENYIYLPY-----SKVTKENVHEYL 342 >UniRef50_C6B4I0 Periplasmic binding protein/LacI transcriptional regulator n=23 Tax=Bacteria RepID=C6B4I0_RHILS Length = 313 Score = 192 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 73/289 (25%), Positives = 113/289 (39%), Gaps = 18/289 (6%) Query: 28 IGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVI 87 I + ++ + KA+ LG + + + + + Q I+ I RG +++ Sbjct: 30 IAIITPAHDNPFFKAEAVGAEAKAKELGYETLLMTHDDDANKQSEMIDTAIGRGAKAIIL 89 Query: 88 IPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADID-FYISFDNEKVGELQAKALVDIVP- 145 VK+AK GI DR IN + I +N + +L A+ V ++ Sbjct: 90 DNAGADASVAAVKKAKDAGIPSFLIDREINATGVAVAQIVSNNYQGAQLGAQEFVKLMGE 149 Query: 146 QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENAL 205 +GNY + G D NA + G V+ Y D +K V Q W A ME L Sbjct: 150 KGNYVELVGKESDTNAGIRSQGYHDVIDDYPD---LKSVAKQSA-NWSQTEAYSKMETIL 205 Query: 206 TANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYK 265 AN + I V++ ND A GAI AL A G V + G D I +G TV + Sbjct: 206 QANPD-IKGVISGNDTMAMGAIAALQAAGRKD-VIVVGFDGSNDVRDSIKSGGIKATVLQ 263 Query: 266 PITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNN 314 P A A E A + + +L+ + +N +N Sbjct: 264 PAYAQAQLAVEQADAYIKNKTTPKEEK----------QLMDCVLINADN 302 >UniRef50_A1WJM2 Periplasmic binding protein/LacI transcriptional regulator n=5 Tax=Proteobacteria RepID=A1WJM2_VEREI Length = 330 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 78/299 (26%), Positives = 135/299 (45%), Gaps = 21/299 (7%) Query: 26 VKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVL 85 KIG+++ L + + + + LG +V A G + Q+S +E+++ RGV +L Sbjct: 36 FKIGVSMKTLSAPYFAAQMEAAKARGKELGYEVLATDAQGKLQKQISDVEDLVTRGVKLL 95 Query: 86 VIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIND-ADIDFYISFDNEKVGELQAKALVDIV 144 +I P + + L N V A G+KV+ D +N A+ + N G L +++ V Sbjct: 96 IINPADSEGLVNAVNNASANGVKVVVIDSTLNPRANFVTQVQSSNSINGALVGHWVIEEV 155 Query: 145 PQG--NYFLMGGSPVDNNAKLFR----AGQMKVLKPYVDSGKIKVVGDQWVDGWLPENAL 198 L+ G + + R +G ++ + VVG W W E L Sbjct: 156 GNKSLKIALLSGEKGNPVGQERRLGVLSGIIEAQLRKFGKADLTVVGQGW-GHWNDEGGL 214 Query: 199 KIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGT 258 K ME+ L AN + I+ V+ ND+ GA +A+ + G +G + ++ DA + I G Sbjct: 215 KAMEDLLVANKD-INMVLGENDSMVLGARRAIESAGRTGILLVAAADAQKEALALIKQGK 273 Query: 259 QTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSR-LLTPIDVNKNNIK 316 +T L+A TA ++ V++ G+ +KDVP + L TP + K N+ Sbjct: 274 YGVTGLNDPALVARTAIDLGVKVVKGE-----------VKDVPKQTLTTPAAITKGNVD 321 >UniRef50_C9PVL5 Sensor protein n=1 Tax=Prevotella sp. oral taxon 472 str. F0295 RepID=C9PVL5_9BACT Length = 858 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 63/249 (25%), Positives = 105/249 (42%), Gaps = 12/249 (4%) Query: 55 GAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDR 114 +V SA N Q++QIE I++G D++++ P + L+ V+ +A G++V+ DR Sbjct: 14 NVRVEFASAKDNNRVQIAQIERFIDKGADLIIVSPNEAKALTPVINKAFDRGVRVVLVDR 73 Query: 115 MINDADIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLK 173 +I DN +G + + + + +G + G + A +G + L Sbjct: 74 KSASDKYTAFIGADNVAIGRAVGRFVGEHLGGKGRVMELQGLRGSSPAIERDSGFREALA 133 Query: 174 PYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQ 233 Y +IKVV + D W A + D V A D GA QA Sbjct: 134 HYP---QIKVVANAHAD-WFALKAETEATRMFKTVG-EADLVFAQCDRMGIGAHQATQKL 188 Query: 234 GLSGKVAISGQDADL---AGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKAD 290 G+ G V I G DA GI+ + GT T P + ++A+ + G+ + + Sbjct: 189 GIKG-VKIVGVDALPTPGDGIEAVKNGTFLATFVYPTH--GDEVLKLAMNILEGRPFRRE 245 Query: 291 TTLNNGLKD 299 T L G+ D Sbjct: 246 TILQTGVID 254 >UniRef50_D2S5J9 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S5J9_9ACTO Length = 335 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 70/334 (20%), Positives = 129/334 (38%), Gaps = 36/334 (10%) Query: 8 LTLCTSLLLTNVAAHAKE------------------VKIGMAIDDLRLERWQKDRDIFVK 49 L+ L L A+ A++ +KIG ++ DL+ WQ Sbjct: 4 LSAACVLALAGCASGAEQAGDVAADGGETTFEAKDPLKIGYSVYDLQNPYWQSYAAGVRA 63 Query: 50 KAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKV 109 AE G +V + +++ Q+S ++IN+G+ L+I P L + + A E I V Sbjct: 64 GAEEAGIEVVIADQKSSQQEQVSGSLDLINQGISALIITPVQPSALPSTIDAAHGEKIPV 123 Query: 110 LAYDRMINDADIDFYISFDNEKVGELQAKALVDIVPQ----GNYFLMGGSPVDNNAKLFR 165 + D D D YI +N + G L A+ +V+ + ++ + Sbjct: 124 VVADIGTEG-DYDGYILSNNYEGGRLAAEHVVEKLGGTPGPHQVGVIELHAGSVVGEERV 182 Query: 166 AGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGG 225 +G + L + ++V + + ++ L+A N ++D + A+ND +A G Sbjct: 183 SGFVDRLG---EEENFEIVSSLDGND-TVDGGFTAAQDMLSA-NPELDVIYAANDDSAVG 237 Query: 226 AIQALSAQGLS--GKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGN 283 A +A+ G+S + G D + I G + TV + A E A+ L N Sbjct: 238 ASRAMETAGVSVANGFTLIGFDGSDPALDLIEQGVMSGTVAQDPFGQGQKAVETALALLN 297 Query: 284 GQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKD 317 G++P + V N+ + Sbjct: 298 GEDPGYSDEATK------TIYFPVEMVTAENVAE 325 >UniRef50_C4ZBY5 D-galactose-binding periplasmic protein n=4 Tax=Clostridiales RepID=C4ZBY5_EUBR3 Length = 338 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 71/335 (21%), Positives = 139/335 (41%), Gaps = 32/335 (9%) Query: 7 LLTLCTSLLLTNVAA------HAKEVKIGMAIDDLRLERWQKDRDIFVKKA-----ESLG 55 ++ LC +L+L+ V+ K++ IG+ D + + + F K+ + Sbjct: 1 MMILCFALILSFVSCSNTRVDEKKQIYIGVTCYDQKDTFIGELIETFKKECASLDTDKYD 60 Query: 56 AKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRM 115 + + A G++ Q Q++ MI G +VL I + LS+++ A ++ I ++ ++R Sbjct: 61 ISMTIMDAAGSQRAQDDQVQEMIEDGCNVLCINLADRTDLSHIINAAMEKDIPIIFFNRE 120 Query: 116 INDADID-----FYISFDNEKVGELQAKALVDIVPQG-----------NYFLMGGSPVDN 159 D D++ +Y+ ++ G++Q + + D + Y ++ G Sbjct: 121 PVDEDLNRWDKLYYVGAKAKQSGQMQGELIADYIKNNPGVDKNGDGRIQYVILEGEMGHQ 180 Query: 160 NAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASN 219 +A + + +K + +I+ + Q W A M + N I+ V+A+N Sbjct: 181 DAIVRTESVTESMKN--NGLQIEKLSCQIA-NWNRAQAQNRMTQLIGQYKNSIELVIANN 237 Query: 220 DATAGGAIQALSAQGLSGK--VAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEI 277 DA A GAI A G++ A G D G++ + TVY A A++ Sbjct: 238 DAMALGAIDAYEKLGVTESNVPAFFGVDGTDDGLEAVQQSKLAATVYNDKEGQAMAMAQL 297 Query: 278 AVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNK 312 A G K + +P +TP +VN+ Sbjct: 298 AYLAATGGSMKNIKFEDKKYVYLPYEKVTPDNVNE 332 >UniRef50_C6PN56 Periplasmic binding protein/LacI transcriptional regulator n=3 Tax=Clostridiales RepID=C6PN56_9CLOT Length = 322 Score = 191 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 63/292 (21%), Positives = 126/292 (43%), Gaps = 16/292 (5%) Query: 24 KEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVD 83 K+ K G + +Q + E G ++ + Q+ QI +MI +GV+ Sbjct: 39 KKHKFGYTCMTMNNPFFQVLEKSIRAEVEKNGDQLITMDPAMDVSKQIDQINDMITQGVE 98 Query: 84 VLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD-IDFYISFDNEKVGELQAKALVD 142 + + P + + + ++ K+ I ++ +D + D + + Y+ DN+ G++ LV Sbjct: 99 AVFLNPVDWEGVRPGLEALKKANIPIINFDTEVKDMNYVTAYVGSDNKNAGKVCGDDLVK 158 Query: 143 IVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIME 202 P G + P N+ AG K ++ +V +Q G + ++K+ + Sbjct: 159 RYPNGGKIAILNCPTMNSINDRIAGF----KSAIEGKNFTIVAEQDGKG-DLQTSMKLAD 213 Query: 203 NALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQT-M 261 + L ++++ I A++ ND TA GA+ A + K+ I G D K IA+G Q Sbjct: 214 DILQSHSD-IVAIMGGNDPTALGALAACKSA-KQSKILIYGVDGSPDAKKEIASGGQFVG 271 Query: 262 TVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKN 313 T + + +AE+ ++ N Q + T + + L+ +V+K Sbjct: 272 TGAQSPKQIGVKSAELGYKVLNKQNVEKKTPVQ-------TFLINKDNVSKY 316 >UniRef50_D1AQM7 Periplasmic binding protein/LacI transcriptional regulator n=9 Tax=Bacteria RepID=D1AQM7_SEBTE Length = 326 Score = 190 bits (484), Expect = 5e-47, Method: Composition-based stats. Identities = 78/338 (23%), Positives = 138/338 (40%), Gaps = 40/338 (11%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAK--------------EVKIGMAIDDLRLERWQKDRDI 46 MK L T+ ++ K + KIG+ I + + R+ Sbjct: 1 MKKIIFLFTILLLIMSCGNKQETKAEGAAGNTAETKEAKKKIGVLIPG-PVGYFVAVREG 59 Query: 47 FVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEG 106 K A ++ A + Q+SQ+E++I++ VD++ I + V+ A + Sbjct: 60 IDKAAAENNVEITYSDAGWDASKQLSQVEDLISKKVDLIAIAAVDSNAAKTAVRMANEAN 119 Query: 107 IKVLAYDRMINDAD------IDFYISFDNEKVGELQAKALVDIVPQ--GNYFLMGGSPVD 158 I +LA+ I D + + Y+ + + G+L + ++ + G L+ G P Sbjct: 120 IPILAFTNAIGDKENGEYEGLITYVGQNEVETGKLTGELAKSLLGEKGGKVVLIEGRPGT 179 Query: 159 NNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVAS 218 + R G M+ L + +VV Q W E ALKI+E+ L N ID ++A Sbjct: 180 SPQINRRKGVMEALDT---NKNFEVVYTQTS-NWEKEQALKIVED-LIQKNQTIDVIIAQ 234 Query: 219 NDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIA 278 +D +A GA AL L K+ + G G+ + +G T Y TA A Sbjct: 235 DDNSAIGAGMALKEANLKDKILVIGLGGSTEGLNAVKSGLIDGTTYMSAVEEGYTAITAA 294 Query: 279 VELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIK 316 V+ NG++ + P + ++VNK+N++ Sbjct: 295 VKYLNGEKVE------------PVTQMKQVEVNKSNVE 320 >UniRef50_C3KM03 Ribose ABC transporter, ribose-binding protein n=1 Tax=Rhizobium sp. NGR234 RepID=C3KM03_RHISN Length = 312 Score = 190 bits (484), Expect = 5e-47, Method: Composition-based stats. Identities = 64/316 (20%), Positives = 129/316 (40%), Gaps = 24/316 (7%) Query: 7 LLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGN 66 ++ T++ L +A+A + IG+ I +A + V+ A+ + Sbjct: 4 MIIGTTAMFLAASSAYAGD--IGVTIAS-NDTFLAVMVQAMKDEAAKTNQPLQVEFADAD 60 Query: 67 EETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIND----ADID 122 Q+SQI+N I VD +++ + K A GI ++ + +D Sbjct: 61 VNKQLSQIQNFIAAKVDAIIVNVVESTATPTITKMAADAGIPLVYVNNTPSDLDQLGPKA 120 Query: 123 FYISFDNEKVGELQAKALVDIVPQ------GNYFLMGGSPVDNNAKLFRAGQMKVLKPYV 176 +I G LQAK + ++ + ++ G + A+ V+ Sbjct: 121 AFIGSQEIDAGTLQAKEVCRVLKEEGKTEDAGILIIQGVLAQHAAEQRSKAVHDVVAT-P 179 Query: 177 DSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS 236 + +K++ +Q W P A +M N +TA + + AV+++ND A GA+ +L A G Sbjct: 180 ECNFMKIIDEQTA-QWDPVKAQDLMTNWITAGHKPV-AVLSNNDDMALGAVNSLKAAGWE 237 Query: 237 -GKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNN 295 V ++G DA + + G TV++ + + A++L G++ ++ Sbjct: 238 MKDVIVAGIDATKEAMHYVKTGDLDATVFQDAVGQGAGSVDAAIKLAKGEKVESPVW--- 294 Query: 296 GLKDVPSRLLTPIDVN 311 +P L+ +V+ Sbjct: 295 ----IPFELVNAANVD 306 >UniRef50_C4FY38 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FY38_9FIRM Length = 339 Score = 190 bits (483), Expect = 5e-47, Method: Composition-based stats. Identities = 76/325 (23%), Positives = 131/325 (40%), Gaps = 29/325 (8%) Query: 6 ILLTLCTSL---LLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESL-GAKVFVQ 61 I C +L L V A K +KIG+A R K A+ ++ V Sbjct: 10 IFCLFCLALVPSLSPKVQAEDKNIKIGVAFYKYDDAYMSSVRVALEKIAKEHSNVELIVN 69 Query: 62 SANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADI 121 + ++ Q QI+ MI +GVDVL+I + VV++AK I ++ ++R + Sbjct: 70 DSQNDQAKQNDQIDVMIQKGVDVLLINVVDTGAAEAVVQKAKDANIPLVLFNREPATDVV 129 Query: 122 DFY-----ISFDNEKVGELQAKALVDIV-----------PQGNYFLMGGSPVDNNAKLFR 165 Y + ++ G +Q K + ++ + +Y ++ G P + A Sbjct: 130 KAYDKARFVGTTAKEAGIIQGKMIAELWKSDKKYDRNGNGKLDYVMLIGDPENPEAIART 189 Query: 166 AGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGG 225 + L ++ +GDQ V W P+ A + L + + ID ++++ND+ A G Sbjct: 190 KYAVDTLTEA--KIEVNKLGDQ-VANWDPDKAKTATDAWLAKDADNIDVIISNNDSMASG 246 Query: 226 AIQALSAQGL------SGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAV 279 AI AL G K+ + G DA + IA G T TV + +A ++ Sbjct: 247 AIAALQGAGFNTDAKADKKIPVFGVDATEEAVDLIARGIMTGTVKQDAEGMAKAVFALSY 306 Query: 280 ELGNGQEPKADTTLNNGLKDVPSRL 304 G G++ T V R+ Sbjct: 307 NAGQGKDFLDGTDYKYDDTQVAVRI 331 >UniRef50_A9FWH4 LACI-type transcriptional regulator n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FWH4_SORC5 Length = 332 Score = 190 bits (483), Expect = 6e-47, Method: Composition-based stats. Identities = 58/280 (20%), Positives = 109/280 (38%), Gaps = 10/280 (3%) Query: 25 EVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDV 84 E+ +G + +AE ++ Q++ + I +GVDV Sbjct: 45 EIVVGFSQTGAESSWRIAHSKSIQAEAEKRHVQLLFADGQNVHNNQVNAVNGFITKGVDV 104 Query: 85 LVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD--IDFYISFDNEKVGELQAKALVD 142 +VI P +KEAK+ GI V+ R ++ + + + D G + L Sbjct: 105 IVIAPQESVGWKPTLKEAKRAGIPVVLTSRGVDAEEDLYETVMVADFVWEGRRAGEWLAK 164 Query: 143 IV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIM 201 + + G+P + A + + G + + + D +K++ Q D + +M Sbjct: 165 QTNGKARIIELVGTPAADVAVMRKTGFAEAIAKHPD---MKIIASQSGD-FTRTKGKTVM 220 Query: 202 ENALTANNNKIDAVVASNDATAGGAIQALSAQGLSG--KVAISGQDADLAGIKRIAAGTQ 259 E L+A+ +I+AV A ND A GAIQA+ A GL + + DA + + G Sbjct: 221 ETLLSAHKGEINAVYAHNDDMALGAIQAIQAAGLKPGQDILVISIDAVKPAFEAMMEGKL 280 Query: 260 TMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKD 299 TV + ++ G++ T + + + Sbjct: 281 NATVECNPMH-GPLLFDTIDKIVRGEKVPKRTIVPGQIFE 319 >UniRef50_D1AQW5 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AQW5_SEBTE Length = 313 Score = 190 bits (483), Expect = 6e-47, Method: Composition-based stats. Identities = 64/313 (20%), Positives = 132/313 (42%), Gaps = 24/313 (7%) Query: 3 IKNILLTLCTSLLLTNVAAHA---------------KEVKIGMAIDDLRLERWQKDRDIF 47 +K ILL L T L + + + K IG+++ + + +D Sbjct: 1 MKKILLVLVTMLFIFSCGSKDQAAGKTEDKPTETGEKTYTIGVSLLTQQHPFYLSLKDAI 60 Query: 48 VKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGI 107 K+A + K+ V AN + Q+S IE+ I + VD ++I P + + + VK+A+ I Sbjct: 61 EKEAAAQNVKLNVSIANQDLNKQISDIEDFITKKVDAIIISPVDSKGVLAAVKKAEAANI 120 Query: 108 KVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRA 166 V+ D D+ +++ DN G++ + + ++ +G ++ VD+ + Sbjct: 121 PVITVDVPAIGVDVAAHVATDNYTGGKIAGEEMARLLNGKGEVAVIEYPTVDSVVQ-RIE 179 Query: 167 GQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGA 226 G +V+ Y D IK+V Q G AL +N + AN N + + D A A Sbjct: 180 GFKEVIAKYPD---IKIVAIQ--AGITRPEALTAAQNMIQANKN-LGGIFGFGDDAALAA 233 Query: 227 IQALSAQGLSGKVAISGQDADLAGIKRI-AAGTQTMTVYKPITLLANTAAEIAVELGNGQ 285 + A+ + G ++ + G D + + + + + A + +++ G+ Sbjct: 234 VAAVKSAGKEDQIKVIGFDGMQEARDAVTKEKSFAAVITQYPEDMGKIAVDTTLKILKGE 293 Query: 286 EPKADTTLNNGLK 298 + + + + G+ Sbjct: 294 QVEKNIPVTPGIF 306 >UniRef50_B2J7A7 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2J7A7_NOSP7 Length = 318 Score = 190 bits (482), Expect = 7e-47, Method: Composition-based stats. Identities = 60/300 (20%), Positives = 113/300 (37%), Gaps = 13/300 (4%) Query: 9 TLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLG--AKVFVQSANGN 66 ++ L+ + +G + + + + ++A + A G Sbjct: 13 IAISAFSLSGCIREKTKKIVGFSQTENIGPWRIAETNSIKEEAAKHKKTYDFLITDAQGQ 72 Query: 67 EETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYI- 125 Q + IE++I R VDV+ + P + L+ ++ A+ I + DR + ++ Sbjct: 73 TSKQFADIEDLIARQVDVIFLAPREYEGLTPALEAARAAKIPIFLIDREAAGRPGEHFVS 132 Query: 126 --SFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIK 182 D G + L + + + G+ + A G + Y + +K Sbjct: 133 FLGSDFIAQGRRVGEWLAKATDGKASIVELTGTAGSSVAIDRAKGFRNAIATYPN---MK 189 Query: 183 VVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS--GKVA 240 ++ Q D + A+++MEN + A + I AV A ND A GAIQAL + G+ V Sbjct: 190 IIATQTAD-FSRAAAVRVMENIIQAKGSDITAVYAHNDEMALGAIQALKSAGMKPGKDVM 248 Query: 241 ISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDV 300 + D A ++ I G ++V E G++ L + L DV Sbjct: 249 VGSIDGQKAALEAIIRGELGVSVESNPRF-GPLVFATMEEYFAGKKIPPRIILKDRLFDV 307 >UniRef50_D2R5M8 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R5M8_9PLAN Length = 333 Score = 190 bits (482), Expect = 8e-47, Method: Composition-based stats. Identities = 61/287 (21%), Positives = 116/287 (40%), Gaps = 8/287 (2%) Query: 18 NVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENM 77 + + +G+++ + D + G V V S + Q +Q+++ Sbjct: 43 STKGSVSKGTVGVSLLTTTNPFFNVIADNIKSELVKEGYDVEVVSGEFDVARQKNQVKDF 102 Query: 78 INRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYD--RMINDADIDFYISFDNEKVGEL 135 I G +V+ P + + + ++EA GI V D + A++ +I+ DN G+ Sbjct: 103 IVAGHAAIVLCPCDSRGIGPAIQEATAAGIPVFTADIACLAPGAEVVSHIATDNLGGGKQ 162 Query: 136 QAKALVDIVPQ-GNYFLMGGSPVDNNAKLFRAGQMKVLKPYV---DSGKIKVVGDQWVDG 191 A+A+++ V G ++ + L G +V+ + S I +V + DG Sbjct: 163 AAEAMIEAVGSAGGKVVILDFKAAESCILRVQGFKEVIDKHNSENPSSAITIVSELPGDG 222 Query: 192 WLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGI 251 + + K E+AL A+ + + + A ND +A GA AL + +V I G D G+ Sbjct: 223 -QKDKSYKAAEDALQAHPD-LAGIFAINDPSALGARAALEKANKADQVKIVGFDGQPDGM 280 Query: 252 KRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLK 298 + I G + + A V G+E + + GL Sbjct: 281 QAIDEGKIFADPIQHPDQIGKRVAASIVSYFRGEEVPKEQLIPTGLY 327 >UniRef50_Q4ZU91 Periplasmic binding protein/LacI transcriptional regulator n=4 Tax=Pseudomonas RepID=Q4ZU91_PSEU2 Length = 306 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 69/294 (23%), Positives = 127/294 (43%), Gaps = 16/294 (5%) Query: 21 AHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINR 80 A A IG+ + R K+ L A +F+++ + E QM Q N++N Sbjct: 19 AQAATPLIGVGMAKYNDNFQTILRHGVEKQVALLDADIFMENGQDDVELQMRQFRNLVNS 78 Query: 81 GVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIND---ADIDFYISFDNEKVGELQA 137 VD +V+ +G+ +++ A + + ++ +R + ++ D + G LQ Sbjct: 79 KVDAIVVAMVSGKSAPEMMRLANEAKVPLVFVNRNPEPATWPALTAFVGSDELESGTLQM 138 Query: 138 KALVDIVP-QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPEN 196 + L +GN ++ G P + ++ + KV+ Y D +KVV + + W Sbjct: 139 EELARRANYKGNVVILVGDPSNKSSVMRTEDVEKVVAKYPD---MKVV-QKKIGNWERSQ 194 Query: 197 ALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS-GKVAISGQDADLAGIKRIA 255 A I+ + + A+ND A GAI L G G + G D G+K +A Sbjct: 195 AATIVIEWVKQ-GVDFSIIAANNDEMAIGAIMGLEKTGKKAGDYLVGGIDGTPDGLKLMA 253 Query: 256 AGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPID 309 G ++V++ AN A + A+ + G+ TL + + VP +L+TP + Sbjct: 254 EGKMAVSVFQDALGQANGAVDAAMRMARGE------TLASPVIWVPFKLITPEN 301 >UniRef50_A6BKA3 Putative uncharacterized protein n=6 Tax=Clostridiales RepID=A6BKA3_9FIRM Length = 355 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 67/337 (19%), Positives = 129/337 (38%), Gaps = 30/337 (8%) Query: 2 KIKNILLTLCTSLLLTNVAAHAKE----VKIGMAIDDLRLERWQKDRDIFVKKAESLGAK 57 + I + L + L+T + + ++IG+ D + + + Sbjct: 18 RRSMIAVILLIAFLITGCEDKSVKRDHIIRIGVVTYTQDDPFINAMTDQLKENLKKMETD 77 Query: 58 V-----FVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAY 112 + V++ + N++ Q +E MI+ G DVL + + S +++ AKQE I VL + Sbjct: 78 LMKIITTVKNGDDNQQDQNEIVEEMIDAGCDVLCVNLVDRTAPSRIIRMAKQEDIPVLFF 137 Query: 113 DRMINDADI-----DFYISFDNEKVGELQAKALVDIV-----------PQGNYFLMGGSP 156 +R D+ +YI + E+ G +Q + + D + + Y L+ G Sbjct: 138 NREPVREDLMQWEKLYYIGCNAEQSGIMQGEIVADYIKNHPEVDKNQDGKIQYILLEGEA 197 Query: 157 VDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVV 216 +A +K L ++ + Q+ D W A M + ++I+ V+ Sbjct: 198 GHQDAISRTDYSVKTL--LEQGIDLEKLSYQFAD-WNRGQAENRMSRLIEQYGDEIELVI 254 Query: 217 ASNDATAGGAIQALSAQGLS--GKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTA 274 ++ND A GA+ A G I G D ++ I G TVY A Sbjct: 255 SNNDEMALGAVAAWQKAGYDCRNWPVIFGIDGLDDALEAIKTGKMKGTVYNDKEDQAMEL 314 Query: 275 AEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVN 311 A+++VE+ G++ + +V+ Sbjct: 315 AKLSVEIVCGKDTNRKHLKEGRYYVSEYCRVDSSNVD 351 >UniRef50_C7G6J4 Putative galactose ABC transporter, periplasmic galactose-binding protein n=3 Tax=Firmicutes RepID=C7G6J4_9FIRM Length = 383 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 71/316 (22%), Positives = 129/316 (40%), Gaps = 38/316 (12%) Query: 27 KIGMAIDDLRLERWQKDRDIFVKKAESLGA---KVFVQSANGNEETQMSQIENMINRGVD 83 K+G+ I R G + + ++ TQ QI+N I GVD Sbjct: 79 KVGVCIYQFSDNFMTLFRTELENYLVEKGFSKDNITIVDGANDQATQTGQIDNFITEGVD 138 Query: 84 VLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADID---------FYISFDNEKVGE 134 VL+I P N + + + GI ++ +R ++ + Y+ D + G Sbjct: 139 VLIINPVNSSSAATITDKVVAAGIPLVYINREPDEEEQKRWSDNNWDVTYVGCDARQSGT 198 Query: 135 LQAKALVDIV---------PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVG 185 Q + + D+ + +Y ++ G P + +A+ +K L+ D+G Sbjct: 199 FQGEMISDLGLDTVDLNGNGKIDYVMVEGDPENVDAQYRTEYSVKALE---DAGLEVNCL 255 Query: 186 DQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS--GKVAISG 243 V W + A +I+ NAL N ++ V +NDA A GA+QA+ + G + + + G Sbjct: 256 SDQVGNWQQDQAQQIVANALGQYGNDVEVVFCNNDAMALGALQAIQSAGRTVGTDIYLVG 315 Query: 244 QDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSR 303 DA ++ + AGT T TV+ +++AA+ A+ G N+ Sbjct: 316 VDALSEALEDVLAGTMTGTVFNDHFSQSHSAADAAINYITG-------AGNDHYIGCDY- 367 Query: 304 LLTPIDVNKNNIKDTV 319 + V K+N +D + Sbjct: 368 ----VKVTKDNAQDVL 379 >UniRef50_B2ILF2 Periplasmic binding protein/LacI transcriptional regulator n=60 Tax=Proteobacteria RepID=B2ILF2_BEII9 Length = 333 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 79/318 (24%), Positives = 141/318 (44%), Gaps = 24/318 (7%) Query: 7 LLTLCTSLLLTNVAAHAKEVK-IGMAIDDLRLERWQKDRDIFVKKAESLG--AKVFVQSA 63 LL L+L AA AK++K +G+++ L + KA+ + KV + Sbjct: 27 LLMGSAILVLAMGAAGAKDLKSVGVSVGSLGNLYFVALSQSAEAKAKEINPDVKVITVDS 86 Query: 64 NGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDF 123 N + Q +QI+N I GVD++++ + + ++ +K A+ GI V+A D + D Sbjct: 87 NYDLNKQFNQIDNFIASGVDLILLAAADPKAIAPAIKRAQNAGIVVMATD--VAAVGADA 144 Query: 124 YISFDNEKVGELQAKALVDIVP-QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIK 182 + +N + GE+ + +VD + G ++ P ++ +G K L ++ KI Sbjct: 145 TVQTNNVQAGEIACQYIVDKLGAAGGQIIIQNGPQISSIIDRVSGCRKSLA---NNPKIT 201 Query: 183 VVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAIS 242 ++ D + +KIM+ LT + KIDAV D A G+ A G + + I+ Sbjct: 202 ILSDDQNGKCSRDEGMKIMQGHLTRH-RKIDAVFTVCDPQATGSDLAAQQFGRN-EFFIA 259 Query: 243 GQDADLAGIKRIAAGT--QTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDV 300 D K G + + +A A +I E+ NG++P +N + + Sbjct: 260 SVDGAPDIEKAFKGGNTRIQASASQDPYGMAQQAVQIGYEIMNGKKP------DNPMILM 313 Query: 301 PSRLLTPIDVNKNNIKDT 318 PS LL K+N+ D Sbjct: 314 PSTLL-----TKDNVADY 326 >UniRef50_A5CYL7 ABC-type sugar transport system, periplasmic component n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5CYL7_PELTS Length = 432 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 76/303 (25%), Positives = 142/303 (46%), Gaps = 12/303 (3%) Query: 20 AAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLG-----AKVFVQSANGNEETQMSQI 74 A +E++I +++ DL + Q + +A G + A + Q + Sbjct: 35 PAGGQEIRIAVSLADLERDGNQIIKRAMTARAGEGGQGGQKVSITWLDAGNDPARQEKDL 94 Query: 75 ENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGE 134 E + ++ V +V+ P + +V++ + GIKV+A D + D+ +D YI+FD+ + GE Sbjct: 95 EQLADQKVRAVVLQPVDPAAGPGLVRKLARAGIKVVALDTLPADSPLDGYIAFDHARAGE 154 Query: 135 LQAKALVDIVPQGNY----FLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVD 190 LQA+ L+++ + N ++ G D ++ A ++ L+ + +++VV + Sbjct: 155 LQARYLLEMARERNAPVKAVILTGDKNDQASREVAASLLENLREHP---QVQVVQVKDHP 211 Query: 191 GWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAG 250 P+ AL +E AL A ++DAV+A++ A A + L ++GL +V G A Sbjct: 212 RGDPQAALVTLEQALAAAGGRLDAVLATDSRLAAAAAEMLKSRGLDRQVVTLGVGAGQKA 271 Query: 251 IKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDV 310 + +AAG V L+A A + A+ L + D + NG DVP+R+ V Sbjct: 272 CQALAAGEHDAEVDVMPDLMAQYAFDAALGLAATGHWQYDRQVKNGDFDVPARVTPVRLV 331 Query: 311 NKN 313 Sbjct: 332 TAE 334 >UniRef50_A6M1Q7 D-galactose-binding periplasmic protein n=4 Tax=Clostridium RepID=A6M1Q7_CLOB8 Length = 361 Score = 188 bits (477), Expect = 3e-46, Method: Composition-based stats. Identities = 64/344 (18%), Positives = 136/344 (39%), Gaps = 37/344 (10%) Query: 2 KIKNILLTLCTSLLLTNVAAHAK---------EVKIGMAIDDLRLERWQKDRDIFVKKAE 52 K+ +L + +L++ +A+ K E+KIG+ + + A+ Sbjct: 15 KLSGLLTVVSIFNVLSSCSANVKSANYSNDIKEIKIGVTLYKQDDAFISEISKNIEDIAK 74 Query: 53 S------LGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEG 106 V V A GN Q +Q++ + + DV+ + + S ++ +AK Sbjct: 75 EKENQGKYKIIVNVADAKGNLINQSNQVDKFVAQNYDVICVNMVDRTAASMIIDKAKSAN 134 Query: 107 IKVLAYDRMINDADID-----FYISFDNEKVGELQAKALVDIVPQGN------------Y 149 I ++ ++R + D++ +Y+ D ++ GE+QA +++ + N Y Sbjct: 135 IPIVFFNREPVEEDMERWNKLYYVGADAQQSGEMQANIIINAYKKDNKMVDKNGDGKIQY 194 Query: 150 FLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANN 209 ++ G ++ + +K + + +++ + D W A M + Sbjct: 195 VMLEGEQGHQDSLIRTEYCIKTITQ--NGIELEKLADDTA-NWQSAQATTKMSQWIKNFG 251 Query: 210 NKIDAVVASNDATAGGAIQALSAQGLSG-KVAISGQDADLAGIKRIAAGTQTMTVYKPIT 268 +KI+ V ++ND A GAI A++ + G K + G D ++ + G+ T+ Sbjct: 252 DKIEVVFSNNDEMALGAINAINDANIGGKKPLVVGIDGLPKALEAVKNGSMIGTILNDSK 311 Query: 269 LLANTAAEIAVELGNGQEPKADTTLNNG-LKDVPSRLLTPIDVN 311 AN +A L + + L G P +T +V+ Sbjct: 312 KQANAIFNLAYTLASHGNVNSIEGLEKGKYIRTPHAEVTSDNVD 355 >UniRef50_UPI00005103C7 solute-binding protein n=1 Tax=Brevibacterium linens BL2 RepID=UPI00005103C7 Length = 364 Score = 188 bits (477), Expect = 3e-46, Method: Composition-based stats. Identities = 96/304 (31%), Positives = 157/304 (51%), Gaps = 22/304 (7%) Query: 26 VKIGMAIDDLRLERWQK-DRDIFVKKAESLG--AKVFVQSANGNEETQMSQIENMINRGV 82 V I + + + + R++ D+ F K AKV ++AN + Q Q E + GV Sbjct: 49 VTIALLLPESKTTRYESLDKPNFEKYVAEANPDAKVEYRNANQDATQQQQQFEAAVTEGV 108 Query: 83 DVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVD 142 D +V+ P + +++ + +A+ + I V+AYDR AD +Y SFDN+K+G LQ +A++D Sbjct: 109 DAIVLDPVDASAVTSALSKAQAKKIPVIAYDRFFEGAD--YYTSFDNKKIGNLQGQAVLD 166 Query: 143 IVP-------QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPE 195 + G +++ G P D NA F+AG + LK + + W P+ Sbjct: 167 GLKAEDKDPKSGPVWMVNGDPKDPNAADFKAGAEETLKK----AGVDITESHDTLDWNPD 222 Query: 196 NALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIA 255 +A + +E L + + + A+ ++ND TAGG + A + K ++GQDA++ G++ I Sbjct: 223 DARQWVEGQLQSADKEPIAIYSANDGTAGGVLAATKKAKV--KPVVTGQDAEVDGLQNIL 280 Query: 256 AGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNI 315 G Q T+YK I A AA+ AV L G+EPKA TT KD P+ + V + + Sbjct: 281 RGDQYATIYKSIPPQAEFAAKAAVALAGGEEPKAGTTY----KDTPTDFVEAKVVTTDTV 336 Query: 316 KDTV 319 KD V Sbjct: 337 KDIV 340 >UniRef50_Q2RKU7 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RKU7_MOOTA Length = 326 Score = 187 bits (476), Expect = 3e-46, Method: Composition-based stats. Identities = 66/298 (22%), Positives = 120/298 (40%), Gaps = 24/298 (8%) Query: 22 HAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRG 81 + E IG+++ + +KA+ K + A+ + Q++Q+++ I + Sbjct: 50 KSGEKVIGVSLLTREHVFYNLIEKAIQEKAQGYKFKPIIMDASQDSNKQLAQVQDFITQK 109 Query: 82 VDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALV 141 VD +V+ P ++ V AK+ GI V D D+ +++ DN G+L AK Sbjct: 110 VDAIVLAPTASAGIAPAVDLAKKAGIPVFTIDIKAEG-DVKSHVATDNYAGGKLAAKYAA 168 Query: 142 DIV--PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALK 199 + V +G ++ S V + G L Y + IKVV + G E A Sbjct: 169 EKVLNGKGKVAIITYSEV-QSCVDREKGFKDALAEYPN---IKVVDVENCSG-SAEKAAN 223 Query: 200 IMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAA-GT 258 + ++ L + +D + A D A GA+ + A G + V + G D + I+ I G Sbjct: 224 LTQDILLKFPD-LDLIFAVGDPFAVGAVSTIKAAGRN--VKVIGFDGNPEAIQEIKNHGL 280 Query: 259 QTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIK 316 V + + ++ + NG+ P L+ P V+ +N K Sbjct: 281 WVADVVQHPDQIGGKVIDLIADYFNGKSVP------------PQVLIPPTIVDASNAK 326 >UniRef50_A4IPB9 D-ribose-binding periplasmic protein n=2 Tax=Geobacillus RepID=A4IPB9_GEOTN Length = 318 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 65/316 (20%), Positives = 125/316 (39%), Gaps = 26/316 (8%) Query: 7 LLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQ--SAN 64 + L + E ++ + + L W+ + LG V V +A Sbjct: 18 MALLAGCGGSKGASGGGGEERVAVVLKTLSSPYWKYVEAGAKAAGKELGVDVTVVGPNAE 77 Query: 65 GNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFY 124 Q++ IE+ +N+ LV+ P + V++ A + VL D + + Sbjct: 78 SEVMQQINMIEDQLNQSPGALVVSPSQPDTVVPVLETAT---VPVLLIDTDAKLKNKTSF 134 Query: 125 ISFDNEKVGELQAKALVDIVPQG-NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKV 183 I +N + G K L ++ +G ++ G+ + G L+ + + Sbjct: 135 IGTENYEAGYEGGKLLSSLLQKGDKVAIISGALGNTATDERVKGAKAALEE----AGMVI 190 Query: 184 VGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISG 243 V +Q D A+ +MEN L NN+ + V A+ND A G ++A+ A+GL V + G Sbjct: 191 VAEQPADS-DKTKAMSVMENILQKNND-VKGVFAANDDMALGVLRAVEAKGLD--VKVIG 246 Query: 244 QDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSR 303 D L ++ I G T+ + + + A+ NG++ D +N+G Sbjct: 247 TDGTLEAVESILDGKLAGTIAQNPYKMGYEGVKNALAAINGEKV--DKRINSG------- 297 Query: 304 LLTPIDVNKNNIKDTV 319 + K+N ++ + Sbjct: 298 ---VEVITKDNAQEKL 310 >UniRef50_C4ZH94 ABC-type sugar transport system, periplasmic component n=2 Tax=Clostridiales RepID=C4ZH94_EUBR3 Length = 325 Score = 187 bits (475), Expect = 5e-46, Method: Composition-based stats. Identities = 75/328 (22%), Positives = 132/328 (40%), Gaps = 25/328 (7%) Query: 1 MKIKN---ILLTLCTSLLLTNVA-----AHAKEVKIGMAIDDLRLERWQKDRDIFVKKAE 52 MK K + + LC L T A + VKI ++++ + R Q D ++A+ Sbjct: 1 MKRKLAYMLSILLCGVFLATGCGSQTTGAGSSNVKILLSVNAIDDFR-QTLVDTAQQEAD 59 Query: 53 SLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAY 112 + G ++ V A N E Q+ I+ G D ++ P + + +A I ++ + Sbjct: 60 ARGVQLDVFDAEDNIENQVEHIKKAAAEGYDAILCGPVSTDTAVEL--KANAGDIPIVFF 117 Query: 113 DRMINDADID----FYISFDNEKVGELQAKALVDIV---PQGNYFLMGGSPVDNNAKLFR 165 + N+ + Y+ D G+ QA+ ++D + N + G + Sbjct: 118 NSCPNEKQLSEGQYIYVGSDESVAGQYQAEYVLDKFADRDEINVVIFKGPKGHSATIGRT 177 Query: 166 AGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGG 225 G K L+ KI V + + W + A + M +K D V+ +ND A G Sbjct: 178 KGVKKTLEAS--GKKINYVFEDYA-NWDGDTAGE-MFELFLKTGSKADCVICNNDGMALG 233 Query: 226 AIQALSAQGLS-GKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNG 284 I+A G+ + I G DA G I G TVY+ + A + A +L +G Sbjct: 234 VIEACKNAGIDLNSLPILGVDATADGCTAIENGDMAFTVYQSGSGQGKAAIDAARKLISG 293 Query: 285 QEPKA-DTTLNNGLK-DVPSRLLTPIDV 310 Q + + ++GL VP + +V Sbjct: 294 QSVQDIEGAADDGLYVWVPFEKVDSNNV 321 >UniRef50_Q97J33 Ribose ABC transporter (Ribose-binding periplasmic component) n=2 Tax=Firmicutes RepID=Q97J33_CLOAB Length = 325 Score = 187 bits (475), Expect = 5e-46, Method: Composition-based stats. Identities = 71/290 (24%), Positives = 119/290 (41%), Gaps = 14/290 (4%) Query: 27 KIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLV 86 K G ++ D ES G + + A ++ QM QI I V + Sbjct: 45 KFGATYMTTNNRFYEIINDEIRSVVESNGDILVTRDAALDKNKQMQQIYEFIKLKVKAIF 104 Query: 87 IIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD-IDFYISFDNEKVGELQAKALVDIVP 145 I P + + + + AK GI V+ D + D + + DN G AK L+ Sbjct: 105 INPVDWKQIKPALIAAKNAGIPVIVVDTPVYDDKLVACTVISDNYDAGVQCAKYLMKSKS 164 Query: 146 QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENAL 205 + N L+ S + G + + S + K+V +G L + + ++++ + Sbjct: 165 KANIMLIEHSKAKS-GIDRIKGFVDTIGA---SKQYKIVAAGDSEGQL-DKTMSLVDDLI 219 Query: 206 TANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYK 265 + N +DA++A ND +A GA+ AL GL GKV + G D I G T T + Sbjct: 220 KKHTN-VDAIMALNDPSALGALAALKENGLLGKVMVFGVDGSPEAKTMIHDGFMTATSAQ 278 Query: 266 PITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNI 315 + + AAE A ++ G+ K D VP L++ ++ K I Sbjct: 279 FPNKIGHIAAEKAYDILKGKRLKRDVI-------VPISLISKENLLKYEI 321 >UniRef50_A6VWF2 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Gammaproteobacteria RepID=A6VWF2_MARMS Length = 322 Score = 187 bits (475), Expect = 5e-46, Method: Composition-based stats. Identities = 85/336 (25%), Positives = 150/336 (44%), Gaps = 25/336 (7%) Query: 1 MKIKNI---LLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLER-----WQKDRDIFVKKAE 52 MK KN L+ + T L ++A + KIG+++ W ++ KA+ Sbjct: 1 MKYKNKIMRLIAVFTMLFAFVGTSYAAKYKIGISVPSADHGWTAGLLWWANKAAADLKAK 60 Query: 53 SLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAY 112 + FV A+ + Q+ +E+++ +G+D LVI+P+N L V++EA EGI + Sbjct: 61 EKDIEFFVV-ASSSGSKQVGDVEDLMIKGIDALVILPHNPATLQKVIEEAYDEGIYTVVV 119 Query: 113 DRMINDADIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKV 171 DR + + +I+ DN +G + A+ L + +GN ++ G + N K V Sbjct: 120 DRELAHPAQNVFIAGDNAGLGRVGAQWLAKEMSGKGNVVVIEGLQIPIN-KQRVDAFNDV 178 Query: 172 LKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALS 231 + Y + IK++ Q D W + AL +MEN L + KIDAV +D G ++A+ Sbjct: 179 IAGYPN---IKILDSQPGD-WSTQKALSVMENFLQKH-PKIDAVWCQDDDMLKGVLKAIE 233 Query: 232 AQGLSGKVAISGQDADLAGIKRIAAGTQT--MTVYKPITLLANTAAEIAVELGNGQEPKA 289 G + + G I+ I +G + TV +++A+ IA+ + + K Sbjct: 234 ESGRTDIKTVLGGAGSKDIIEMIQSGNKMVRATVTYSPSMIASG---IALAVHGVKHEKL 290 Query: 290 DTTLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFH 325 + + + L V K N D KD + Sbjct: 291 GYLYHEPSRVI----LGADLVTKENAADYYFKDAAY 322 >UniRef50_B0P063 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P063_9CLOT Length = 326 Score = 187 bits (475), Expect = 5e-46, Method: Composition-based stats. Identities = 65/291 (22%), Positives = 124/291 (42%), Gaps = 19/291 (6%) Query: 29 GMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVII 88 G + E ++ + + E G ++ +++ Q QI+ ++ R VD + + Sbjct: 48 GATYMTMNNEFYKIVNNQIRMQVEKNGDQMITLDPALDQKKQNEQIKQLVKRKVDAIFLN 107 Query: 89 PYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD-IDFYISFDNEKVGELQAKALVDIVPQG 147 P + + + + AK+ I V+ D + +D + I DN K G L AK ++ Q Sbjct: 108 PVDWKAVEPGLVAAKKAKIPVIVIDSQVYRSDLVAMTIVSDNYKAGVLCAKEMMKQKDQA 167 Query: 148 NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTA 207 N L+ + +A G + +K ++ K++ G + E AL ++ + Sbjct: 168 NIVLLTHNAA-RSAVDRINGFLDTIK---NNKNYKILASADTQGQI-ERALPKVDKIIEE 222 Query: 208 NNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPI 267 N ID V+ ND A GA+ AL ++G V + G D G K I G T T + Sbjct: 223 YQN-IDVVMGLNDPAAMGALAALDSKGAREGVLVYGIDGSPEGKKLIKEGMMTGTAAQSP 281 Query: 268 TLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDT 318 +A+TA A ++ G++ + ++++ + K N++ T Sbjct: 282 KQMADTAVNAAYQILQGEKVEKK------------KVISVQMITKKNVEQT 320 >UniRef50_C0EY05 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EY05_9FIRM Length = 329 Score = 187 bits (474), Expect = 6e-46, Method: Composition-based stats. Identities = 67/319 (21%), Positives = 131/319 (41%), Gaps = 20/319 (6%) Query: 3 IKNILLTLCTSLLLTNVAAHAKEVK--IGMAIDDLRLERWQKDRDIFVKKAESLGAKVFV 60 + I + L + +++ K IG + ++ + ES G + Sbjct: 22 VATICIVSIALLFFSRNKNESEKSKRTIGALYMTMNNPYFEVINEEIKAVVESKGDVLET 81 Query: 61 QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI-NDA 119 + + + + Q Q+E I VD ++I + + + + +++AK+ GI V+A D +I N + Sbjct: 82 RDSGMDAKVQAKQVEKFIEEKVDCILINAVDWKKIGSSLEKAKKAGIPVIAVDALIYNRS 141 Query: 120 DIDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSG 179 +D + +N + GE AK L+ +G + S + +A G + L+ Sbjct: 142 FVDGTVVSNNYQAGEQCAKDLMKRRKKGKILFLVQSE-NKSAIDRIKGFKETLEKA--GW 198 Query: 180 KIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKV 239 K + VG+ G L E + ++E L + ID V+A ND +A GA+ AL A+ + V Sbjct: 199 KYENVGELECQGQL-ELSQPLVEKVLNKTKD-IDVVMALNDPSAMGAMAALDAEHMLSDV 256 Query: 240 AISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKD 299 + G D I T + E+ ++ +G++ + Sbjct: 257 LVYGADGSPEAKTMIYENKMAATSAQSPRTTGKKTVEMLYKILDGKKTEKQC-------- 308 Query: 300 VPSRLLTPIDVNKNNIKDT 318 ++ + K+NI D Sbjct: 309 ----IVPVSLITKDNINDY 323 >UniRef50_A9HN30 Periplasmic binding protein/LacI transcriptional regulator n=4 Tax=Alphaproteobacteria RepID=A9HN30_GLUDA Length = 335 Score = 187 bits (474), Expect = 7e-46, Method: Composition-based stats. Identities = 70/304 (23%), Positives = 123/304 (40%), Gaps = 24/304 (7%) Query: 24 KEVKIGMAIDDLRLERWQKDRDIFVKKAESL-GAKVFVQSANGNEETQMSQIENMINRGV 82 K IG + + + + ++ K+ + N+ TQ+SQ+EN + + V Sbjct: 48 KSYVIGFSQANFKEPYRAHVDHELQRLVKNYPQFKLVIADGQANDNTQVSQVENFLTQQV 107 Query: 83 DVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVD 142 D+L + + L+ V +GI V+ DR ++S DN + Sbjct: 108 DILFVSAFEAAPLTPAVSAVYDKGIPVIELDRRTTGEKFTSFVSGDNRAIAHEAGLYAAS 167 Query: 143 IVPQGN-YFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIM 201 ++P G ++ G P + A G + + K+K++ Q VD W+ + A+++ Sbjct: 168 LLPDGGDVAILEGLPSSSPAIERLEGFKAGIST---NPKVKIIAVQPVD-WMQDKAVEVF 223 Query: 202 ENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADL---AGIKRIAAGT 258 L A+ + I V SND A GA A+ G G+V I G D GI+ +A G Sbjct: 224 SAMLQAHPD-IKLVYTSNDLAAAGAYIAVKQAGKLGQVKIIGTDGLPGPSGGIRAVAEGQ 282 Query: 259 QTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTP-IDVNKNNIKD 317 T T P A A ++A ++ + VP + P ++ +N K+ Sbjct: 283 WTATYVYPTG--AAEALDLAKKIL-----------IDCASSVPRLVTVPTQRIDASNAKE 329 Query: 318 TVIK 321 K Sbjct: 330 LYAK 333 >UniRef50_B4CUB2 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUB2_9BACT Length = 327 Score = 187 bits (474), Expect = 7e-46, Method: Composition-based stats. Identities = 70/321 (21%), Positives = 117/321 (36%), Gaps = 26/321 (8%) Query: 8 LTLCTSLLLTNVAAHAKEVKIG--------MAIDDLRLERWQKDRDIFVKKAESLGAKVF 59 L LC+ ++L G ++ L + D + + G ++ Sbjct: 23 LLLCSLIVLVGCEKKPAPDTAGAAGSRFFAVSFQTLNNPFFVDLNDGLKQVIDEHGDRLV 82 Query: 60 VQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDA 119 A + Q + + ++I + + + P N + + + A+ I V+ D + DA Sbjct: 83 TLDAQFSSLKQKNDLSDVIEQKPAAIFLNPVNWESVRATLIAARNAKIPVIVVDAPVPDA 142 Query: 120 D-IDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDS 178 D + ++ DN G L A+AL D PQ ++ S V+ AG VL Sbjct: 143 DLVLAQVASDNVAAGRLAAQALGDARPQAKVAILQYS-VNKACVDRVAGFTDVLAKSF-- 199 Query: 179 GKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGK 238 ++ Q V G A + + L +DAV ND A G + A+ A G SGK Sbjct: 200 PGATIIARQDVKG--TSEATRPVMRDLLGRFPDLDAVFPINDPGAIGCVSAIDAAGRSGK 257 Query: 239 VAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLK 298 V + D + I G T + + + AA A + G+ + Sbjct: 258 VLVVTVDGSREAAQFILNGGIHSTSAQFPKKIGSLAAGAAYDHLAGKPVDKE-------I 310 Query: 299 DVPSRLLTPIDVNKNNIKDTV 319 VP L V K N + V Sbjct: 311 KVPVTL-----VTKANAAEFV 326 >UniRef50_C5V3A4 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V3A4_9PROT Length = 303 Score = 186 bits (473), Expect = 8e-46, Method: Composition-based stats. Identities = 78/322 (24%), Positives = 137/322 (42%), Gaps = 27/322 (8%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKK-AESLGAKVF 59 M +L L + L VAA K I A D + + + + A Sbjct: 1 MNTIRMLRVLLLAFCLPAVAAENK--VIAFAQDTMANDFRRAQVYEVRDEVARYPQLSFV 58 Query: 60 VQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDA 119 A G + QIE I + VD+LV+ + Q + VV +A Q GI V+ DR IN Sbjct: 59 YSDAQGQTSLLIRQIEQFIEQKVDLLVLGTNDEQAVVPVVTKAYQAGIPVIVLDRGINGK 118 Query: 120 DIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDS 178 +I+ DN ++GE+ A+ + + +G L G + +L G + + + Sbjct: 119 QFTSFINSDNIRIGEIGAEYIASRLNGKGLVLLFEGLQKADVTQLRSKGFLTEIGKH--- 175 Query: 179 GKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGK 238 I+V+ + +L ++A+ ME L ++ ++DA+ + +D+ G LS + + Sbjct: 176 SGIRVI--RRTGNYLRKDAVVEMEK-LVSDGIRVDAIFSESDSMLSGVRMVLSKSNIDPR 232 Query: 239 -VAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGL 297 V + G D + I GTQ+ +V P+ A EIA+++ G+ Sbjct: 233 SVVMVGCDYTSEARQAIRDGTQSGSVLFPLG--GKKAVEIALKIFAGES----------- 279 Query: 298 KDVPSRLLTPID-VNKNNIKDT 318 VP + P+ V K+N++ Sbjct: 280 --VPKHIYNPVKLVTKDNVEQV 299 >UniRef50_P44883 D-galactose-binding periplasmic protein n=246 Tax=Bacteria RepID=DGAL_HAEIN Length = 331 Score = 186 bits (473), Expect = 8e-46, Method: Composition-based stats. Identities = 66/339 (19%), Positives = 142/339 (41%), Gaps = 29/339 (8%) Query: 1 MKIKNILLTLCTSLLLTNVAAH-AKEVKIGMAIDDLRLERWQKDRDIFVKKAESLG-AKV 58 MK +L T+ ++ L + +A A + +IG+ I R K+A+ +G K+ Sbjct: 1 MKKTAVLSTVAFAIALGSASASFAADNRIGVTIYKYDDNFMSLMRKEIDKEAKVVGGIKL 60 Query: 59 FVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRM--- 115 + + + Q Q++ ++++GV L I + ++ +AK + I V+ +++ Sbjct: 61 LMNDSQNAQSIQNDQVDILLSKGVKALAINLVDPAAAPTIIGKAKSDNIPVVFFNKDPGA 120 Query: 116 --INDADIDFYISFDNEKVGELQAKALVDIV---------PQGNY--FLMGGSPVDNNAK 162 I + +Y+ D ++ G +Q + G L+ G P +A+ Sbjct: 121 KAIGSYEQAYYVGTDPKESGLIQGDLIAKQWKANPALDLNKDGKIQFVLLKGEPGHPDAE 180 Query: 163 LFRAGQMKVL-KPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANN-NKIDAVVASND 220 + ++ L + + ++ + W A ++ L+++ N I+ ++++ND Sbjct: 181 VRTKYVIEELNAKGIQTEQLFI----DTGMWDAAMAKDKVDAWLSSSKANDIEVIISNND 236 Query: 221 ATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVE 280 A GA++A A G K+ I G DA ++ I+ G TV +++ Sbjct: 237 GMALGALEATKAHGK--KLPIFGVDALPEALQLISKGELAGTVLNDSVNQGKAVVQLSNN 294 Query: 281 LGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTV 319 L G+ T + V + + V+K+N+ D + Sbjct: 295 LAQGKSATEGTKWELKDRVV---RIPYVGVDKDNLGDFL 330 >UniRef50_A7NMH5 ABC-type sugar transport system periplasmic component-like protein n=2 Tax=Roseiflexus RepID=A7NMH5_ROSCS Length = 372 Score = 186 bits (473), Expect = 8e-46, Method: Composition-based stats. Identities = 82/377 (21%), Positives = 159/377 (42%), Gaps = 58/377 (15%) Query: 1 MKIKNILLTLCTSLLLTNVAA------------------------HAKEVKIGMAIDDLR 36 MK + L T +L T +AA ++ IG++ + Sbjct: 1 MKRRQFALFAITLMLATLIAACGGTPTTTAPTAAPAPQPTTAPAPEGRKFTIGISNPFIS 60 Query: 37 LERWQKDRDIFVKKAESL---GA--KVFVQSANGNEETQMSQIENMINRGVDVLVIIPYN 91 E + ++ + G ++ ++SA+ + Q+ Q++N+IN+GVD +++ P + Sbjct: 61 SEYRTQMIQSLIEVNKEYMERGITNELVIESADTDVAGQIQQLQNLINKGVDAILVNPSD 120 Query: 92 GQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIV-PQGNYF 150 L++ ++EA +GI V++ D+ +N + + + D ++ ++ A+ L + + QGN Sbjct: 121 VNGLNDTLQEAINKGIIVISVDQELNTPGV-YNVGIDQKEWAKISARWLAEKLGGQGNIV 179 Query: 151 LMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNN 210 L+ G P G +VLK Y + IKV+G + W ++M N L + N Sbjct: 180 LIEGFPGHPANVARMEGVEEVLKEYPN---IKVLGRE-TGKWDEATGQQVMSNFLASFPN 235 Query: 211 KIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAA------GTQTMTVY 264 +D D A GA+QA+ A S + G+ ++ +T+ V Sbjct: 236 -LDGYWTQ-DGMAIGAMQAVMAANPSKWPVLVGE-GRCQFLQLWDQRLKEDPNFETIAVA 292 Query: 265 KPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKD---TVIK 321 P ++ T IA+ + G++ G + + P+ V K+N ++ TV K Sbjct: 293 NPP-GVSPTGLRIAINMLQGKQVDKSKL--GGANGLSFVIPVPVIVTKDNFQEVFTTVCK 349 Query: 322 --------DGFHKESEL 330 DG + E+ Sbjct: 350 DKPATYLLDGIMTDEEV 366 >UniRef50_C4G5I4 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G5I4_ABIDE Length = 342 Score = 186 bits (473), Expect = 8e-46, Method: Composition-based stats. Identities = 58/305 (19%), Positives = 124/305 (40%), Gaps = 22/305 (7%) Query: 18 NVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESL--GAKVFVQSANGNEETQMSQIE 75 + + K I L + W + +A++ G KV V + N TQ++ ++ Sbjct: 46 ASSGNYKGKSIAYLTPSLDVPFWCYMKHGIEDQAKNTMPGVKVTVYDSKDNANTQLANVQ 105 Query: 76 NMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGEL 135 + I VD +VI P + V+ A++ GI V+ D + + +IS DN + Sbjct: 106 DAITNKVDGIVISPTDSASCIAVLSAAEEAGIPVVICDIGTDSGEYVSFISTDNSGGAKK 165 Query: 136 QAKALVDIVPQGN-YFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLP 194 + + D + +G+ + + N L + G + +K K+K V + ++ Sbjct: 166 LGEYVADKLNKGDEIAQIALNQARKNGVLRKEGFEEGIKE-----KLKEVDFRQMEKVNR 220 Query: 195 ENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRI 254 + ++ ++ +T+ N + + ++ + GA+ AL + K I G D ++ I Sbjct: 221 DEGVRYTQDLITSYPN-LKCIFCHSEDPSMGAVTALKEIN-NDKCKIVGFDCSPEVVEAI 278 Query: 255 AAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNN 314 +G T + + TA + +G P+ + +++ + V ++N Sbjct: 279 KSGDILATAAQQPVFMGRTAVDCLKTHLDGGTPEKEISVDT------------LLVTQDN 326 Query: 315 IKDTV 319 I D Sbjct: 327 INDVY 331 >UniRef50_C0VSF4 D-ribose ABC superfamily ATP binding cassette transporter, binding protein n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VSF4_9CORY Length = 306 Score = 186 bits (473), Expect = 9e-46, Method: Composition-based stats. Identities = 69/326 (21%), Positives = 141/326 (43%), Gaps = 31/326 (9%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEV------KIGMAIDDLRLERWQKDRDIFVKKAESL 54 M K+++L L L+ + ++V + +A+ + + + R KA L Sbjct: 1 MLRKSLVLLTAGILTLSGCSGTPRDVPAAGSRAVTLALSTEKNPFFLQVRYGAQAKANEL 60 Query: 55 GAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDR 114 G + V A + E Q +Q+++ ++ GV V+ P + + L+ V + ++GI + DR Sbjct: 61 GIDLTVLDAGDDAEVQAAQLDD-VSSGVA--VVNPADSEALAPAVSQLNEKGIPAITVDR 117 Query: 115 MINDADIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLK 173 I AD+ I +N + G A L + QG ++ G +++ G + + Sbjct: 118 TITGADVAALIDSNNTEGGAAAASVLAKAIRAQGEVIVLRGIEGSSSSAERYEGFTQAMA 177 Query: 174 PYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQAL-SA 232 + ++++V + D + + A ++ + L A++ + + A ND A GA+ AL Sbjct: 178 EHP---RVRIVAAEAAD-FDRDTARDLVTDLL-ADHPDVAGIFAENDEMALGAVDALGER 232 Query: 233 QGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTT 292 G V + G D G++ + T+ + + L TA E A +L +G+ ++ T Sbjct: 233 AGKD--VKVVGFDGTEEGVRAVKNRKLVATIAQQSSELGATAIEQAGKLLDGEAAESVHT 290 Query: 293 LNNGLKDVPSRLLTPIDVNKNNIKDT 318 + V ++NI+ Sbjct: 291 -------------PVMVVTRDNIEKY 303 >UniRef50_Q0BAE1 Periplasmic binding protein/LacI transcriptional regulator n=3 Tax=Burkholderia RepID=Q0BAE1_BURCM Length = 321 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 74/307 (24%), Positives = 128/307 (41%), Gaps = 17/307 (5%) Query: 4 KNILLTLCT---SLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFV 60 K+IL L S L+ A A + + + + +E W F K+A + G KV V Sbjct: 5 KSILSCLALGTISGALSTGADAANQPHVALLMPTQSVEYWALYIKGFQKEAAADGLKVDV 64 Query: 61 QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD 120 + N + Q +Q+E + + DV+V++P + + +++ Q I ++ + M + Sbjct: 65 KVTNYDANEQATQVEQTLAQKPDVIVLVPVDSSAMVPSIRKIDQARIPLVISNSMPDQKY 124 Query: 121 IDF---YISFDNEKVGELQAKALVD------IVPQGNYFLMGGSPVDNNAKLFRAGQMKV 171 + + ++ GE AKA++ +G ++ G G + Sbjct: 125 SRYWKVFTGPNDISNGEAAAKAMIQGFKEKGYGDKGKVIVINGPMGTPPQVQRYQGFVDG 184 Query: 172 LKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALS 231 LK ++ I+VVG Q D W A T + + V ND+ G + A Sbjct: 185 LKK--NAPGIEVVGAQPAD-WDAVKAEAAASALFTQFKD-VKGVYTENDSQLRGVVTAAQ 240 Query: 232 AQGLSG-KVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKAD 290 GL K+ I G D G++ I+AG TV + AA+ A+EL G+ P+A Sbjct: 241 RLGLEPSKLVIVGHGCDAGGVEAISAGKAYATVEQSPFDDGAYAAKAALELATGKTPRAV 300 Query: 291 TTLNNGL 297 L N + Sbjct: 301 QYLPNPI 307 >UniRef50_B1ZN56 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZN56_OPITP Length = 310 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 64/286 (22%), Positives = 112/286 (39%), Gaps = 8/286 (2%) Query: 19 VAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMI 78 ++ +G A + + +AE G + A N + QM + + I Sbjct: 15 CTVSQAKLTVGFAQTGSESVWRAANSESIKSEAEKQGIDLRFVDAQSNVDNQMKALRSFI 74 Query: 79 NRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD--IDFYISFDNEKVGELQ 136 VD +V+ P V+++AK GI V+ DR I +I D K G++ Sbjct: 75 ADQVDAIVLAPLVVSGWEAVLQDAKAAGIPVIIMDRKIVADPSLYATFIGSDFFKEGQMA 134 Query: 137 AKALVDIVPQG-NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPE 195 A+ ++ Q + G P + A + + + G ++V + V + + Sbjct: 135 AEWILAHADQKRKIVELQGEPGSSAANERQRAFASTMATHTSDG-FRIVARK-VANFRRD 192 Query: 196 NALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSG--KVAISGQDADLAGIKR 253 + M LT + + I+ V A ND A GAI+A+ A G S + + DA ++ Sbjct: 193 QGRQAMAELLTTHGSDIEIVFAHNDDMALGAIEAIEAVGRSPGRDIMVVSIDAIKTAVEA 252 Query: 254 IAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKD 299 +A+G TV L E V L +G +T + + D Sbjct: 253 VASGKLNCTVECNP-LFGPKVIEAVVRLTSGGTVMKETFNKDIVID 297 >UniRef50_C6JG14 Monosaccharide-transporting ATPase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG14_9FIRM Length = 488 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 82/334 (24%), Positives = 158/334 (47%), Gaps = 27/334 (8%) Query: 22 HAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRG 81 A KIG+ + D + + D + + E G + V++A G+ Q+SQI+ I+ Sbjct: 92 EASAGKIGVLLSDDDEDA-KIDSEEMTSQIEDGGYEADVKNAGGDPALQISQIQEFIDEQ 150 Query: 82 VDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI-NDADIDFYISFDNEKVGELQAKAL 140 V L+I P + L++++K AK++ I V++YD +I + ADI++Y ++D +G+ AK + Sbjct: 151 VSALIIDPVDSYGLTDILKTAKEQEIPVISYDSLIRDTADINYYATYDTRAIGKDIAKEI 210 Query: 141 VDIV---------PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKI------KVVG 185 + + + GSP DN A G + L+ Y+D G + Sbjct: 211 IKKMDLDKAREDKKSYTIEFLMGSPDDNAALFLCNGIQEGLQEYLDDGTLVCKSGNTSFD 270 Query: 186 DQWVDGWLPENALKIMENALTANNNK---IDAVVASNDATAGGAIQALSAQGLSG----K 238 D + W +A +++ ++ + D + + D A A + LS GL Sbjct: 271 DTGIMRWSETSAKTKLDSIISEFYAEEKAPDIICTAYDGFAYAAEEILSDSGLEPGSDEW 330 Query: 239 VAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQE--PKADTTLNNG 296 I+G ++ +K IAAG + T++ LA A++A++ G++ K + +NG Sbjct: 331 PMITGYGSEAQAVKDIAAGKMSFTMFMDRKELAKGGAQMAIDYLTGEKVDVKDYSQYDNG 390 Query: 297 LKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 +K V + ++K+N + ++ +G + E E+ Sbjct: 391 VKIVGTFTCGAQMIDKDNYQ-ILVDNGTYTEDEI 423 >UniRef50_C8S5N2 Monosaccharide-transporting ATPase n=1 Tax=Rhodobacter sp. SW2 RepID=C8S5N2_9RHOB Length = 349 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 75/304 (24%), Positives = 121/304 (39%), Gaps = 23/304 (7%) Query: 23 AKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSAN--GNEETQMSQIENMINR 80 A K+G L E W+ + + A LG + Q+A G++ Q++ EN+I++ Sbjct: 54 AAGTKVGGVSKTLTNEYWRSLGEGYANVATKLGIEFVYQAAQSEGDQLGQLAIAENLISQ 113 Query: 81 GVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKAL 140 G + L+ P L V+ A G+ VL + + + + Y+ + G A Sbjct: 114 GFNALLFSPQTDANLIPAVEAATAAGVPVLNVNDAVIPSAAN-YVGNVQKGNGVNVANWF 172 Query: 141 VDIVPQG-NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALK 199 + P G ++ G P A AG + + GK +VV W E A Sbjct: 173 IANRPDGGKVAVIEGQPGVYAAGQRTAGFTETITA---GGKFEVVASVPA-NWSREEAFN 228 Query: 200 IMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQ 259 L + I A+ND A G ++A+ A G + +VA+ G D + AG Sbjct: 229 AASTILQQYPDLI-GFYANNDGMALGVVEAVKAAGKAEQVAVFGTDGISDAYAAVRAGDL 287 Query: 260 TMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPID-VNKNNIKDT 318 T TV L A E+A+ L GQ D+P + TP + K+N++ Sbjct: 288 TGTVDSFPVLTGEIAMEVALRLMAGQ-------------DLPRVVATPQALITKDNVETY 334 Query: 319 VIKD 322 D Sbjct: 335 ATSD 338 >UniRef50_B0G317 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=B0G317_9FIRM Length = 345 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 56/276 (20%), Positives = 118/276 (42%), Gaps = 8/276 (2%) Query: 22 HAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRG 81 + KIG + D+ + ++ + ++ V+ + + Q SQI+ MI+ G Sbjct: 57 EQESWKIGFSGIDMENPYFLTLESAIKEEVDGKNCELIVKDPKTDPDMQASQIQEMIDEG 116 Query: 82 VDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD-IDFYISFDNEKVGELQAKAL 140 ++ +++ P + + ++ ++ K+ +K++ D + + D +D YI DN G L + L Sbjct: 117 INAIILSPVDWEKITPSLEALKEADVKIVNVDTQVKEMDYVDAYIGSDNYNAGVLCGEDL 176 Query: 141 VDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKI 200 + P G + P N+ G + L + ++V + G +L+ Sbjct: 177 IKRCPDGGKVAILECPTQNSVNERITGFEETLAKAEN--GFEIVAREDTSGEFQ-KSLEA 233 Query: 201 MENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIA--AGT 258 + L+ N++ I A++ ND A GA A++ G++ I G D K + Sbjct: 234 AQKILSENSD-IVAIMCGNDQMAVGAKTAMNVA-EQGQILIYGVDGSPDIKKELKKTENQ 291 Query: 259 QTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLN 294 TV + + AA + + NG++ + + N Sbjct: 292 IAGTVAQSPISMGKDAANTVLNILNGKDYEKEIKEN 327 >UniRef50_A0R773 Sugar ABC transporter substrate-binding protein n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0R773_MYCS2 Length = 332 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 72/306 (23%), Positives = 131/306 (42%), Gaps = 16/306 (5%) Query: 7 LLTLCTSLLLTNVAAHAKE-VKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSA-- 63 L+ L +T + VK+G+ + R+ +A+ GA++ + Sbjct: 16 LMAGSLVLGMTACGGSGSDGVKVGLITKTDSNPYFVHLREAAQAQADKDGAQLIAVAGAF 75 Query: 64 NGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD-ID 122 +G+ E Q++ IENM+ +GV ++I P + + + +K+A+ G+ V+A D + D +D Sbjct: 76 DGDNEGQVTAIENMVGQGVKGILITPNSSTGVLDAIKKARDAGVVVIALDTATDPEDAVD 135 Query: 123 FYISFDNEKVGELQAKALVDIVPQG--NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGK 180 + DN+ G Q K + + ++ G+P G ++ +S Sbjct: 136 ATFATDNKAAGVAQGKWVKAALGNTPPQVVMLDGTPGGTVDTFRHDGFLEGFGLTDNSP- 194 Query: 181 IKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVA 240 ++VG + +G A MEN L ++A+ N+ A GA QA+ A G + +V Sbjct: 195 -EIVGQENTNG-DQTKAQTAMENLLQRAPG-VNALYTINEPAAAGAYQAIQAVGRADQVT 251 Query: 241 ISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDV 300 I D G+ + AG TV + +A + V+ D T +G D Sbjct: 252 IGSIDGSCTGVADVKAGKIGATVMQFPAKMAELGVQAVVKFAE------DGTKPSGFNDT 305 Query: 301 PSRLLT 306 S L+T Sbjct: 306 GSELIT 311 >UniRef50_Q7NMF9 Periplasmic sugar binding protein of ABC transport system n=1 Tax=Gloeobacter violaceus RepID=Q7NMF9_GLOVI Length = 317 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 65/291 (22%), Positives = 115/291 (39%), Gaps = 13/291 (4%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKE----VKIGMAIDDLRLERWQKDRDIFVKKAESLGA 56 ++ L LC +L+L A + E +G+++ + +++ ++A Sbjct: 7 VRRFWWLAALC-ALVLGACAQNGSEGGNRPVVGVSLLTRQDAFYRELERGLKEEAAKQKL 65 Query: 57 KVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI 116 V + + + Q Q+EN + V +V+ P + Q + + A Q I V D Sbjct: 66 TVRLDAGEFDLARQQGQLENYTVQKVAAIVVCPTDSQGIGPAIARANQADIPVFTADIRA 125 Query: 117 NDADIDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYV 176 + + +I+ DN G L + + + P + G + LKPY Sbjct: 126 KEGAVVSHIASDNVAGGRLAGEYAAKRLNGRGQVAIIDQPYIQSVIERVRGFEEALKPYP 185 Query: 177 DSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS 236 + I+VV DG + + +LK E+ L + K+DAV A ND +A G + A+ A G Sbjct: 186 N---IRVVARLTGDG-VRDRSLKAAEDLLQSQ-RKLDAVFAVNDESAFGVVSAIEAAGRK 240 Query: 237 GKVAISGQDADLAGIKRIAAGT--QTMTVYKPITLLANTAAEIAVELGNGQ 285 G + + G DA K IA G + + + GQ Sbjct: 241 G-IFVMGYDASEEARKLIAGGKSPLQADIAQDPYRIGQETIRAVATHLAGQ 290 >UniRef50_C0CKL2 Putative uncharacterized protein n=2 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CKL2_9FIRM Length = 348 Score = 185 bits (469), Expect = 2e-45, Method: Composition-based stats. Identities = 57/299 (19%), Positives = 127/299 (42%), Gaps = 16/299 (5%) Query: 18 NVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENM 77 N + IG+A + ++ + K + E L ++ VQ A + TQ++QI+ Sbjct: 47 NTVSEGDSFLIGVASPNNKVPYFSKLVEGMTDLQEELNVELDVQDAQDDTNTQINQIQTF 106 Query: 78 INRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIN-------DADIDFYISFDNE 130 I G D+++++P + L + E + I ++ DR ++ D+ ++ D+ Sbjct: 107 IAEGCDLIIMMPVQLESLIPIAMECNEAEIPIMTVDRKLSASDPKDVGVDLITHVGCDDV 166 Query: 131 KVGELQAKALVDIVP-QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWV 189 + G Q + + ++ +G+ L+ G+ ++ L + G + L ++ I++V Q Sbjct: 167 EGGRKQGELVHQLLGDEGSIALIQGTLGASSQVLRQQGLEEYLSE--NAPGIEIVAAQNS 224 Query: 190 DGWLPENALKIMENALTAN-NNKIDAVVASNDATAGGAIQALSAQGLSGKV-AISGQDAD 247 D A+ + +N LT +IDA+VA + +A GA+ A+ + + + G D Sbjct: 225 DQ-DQSQAITVTQNFLTRFAKGEIDAIVAQDPYSALGAVDAIKSASRDELLGTVIGYDLP 283 Query: 248 LAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLT 306 + I A + + + ++A + ++ N ++P + Sbjct: 284 SEVLDSIKAKDMYGSTLQAPYDMGALTLQVAYQCL---TEGSEEIEANTYTEIPVVYIE 339 >UniRef50_UPI00016C56B8 bifunctional carbohydrate binding and transport protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C56B8 Length = 349 Score = 185 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 63/328 (19%), Positives = 125/328 (38%), Gaps = 26/328 (7%) Query: 2 KIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESL----GAK 57 ++ LL + + A +E I + L E WQ R + A L G + Sbjct: 3 RVHLYLLLAAVLPIASGCARRGEEYTIVVIPKGLSHEHWQSVRRGAERCAADLEAEDGTR 62 Query: 58 V-FVQSA---NGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYD 113 V + + Q+ ++ + G LV+ P + ++ VK A G+ V+ D Sbjct: 63 VRVIFDGPLRERDALEQIRIVDRRVATGASALVLAPQHSATMTACVKRAADAGVPVVIID 122 Query: 114 RMINDAD-IDFYISFDNEKVGELQAKALVDIV-----PQGNYFLMGGSPVDNNAKLFRAG 167 ++D + Y++ DN G L + L+ + + L + + G Sbjct: 123 SGLDDPNHFVKYVATDNYNGGRLAGRHLIRELQRRRKDKPKLILFRYAVGSQATEDRERG 182 Query: 168 QMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAI 227 +K + + G ++A++ + N++D + A N+++A G Sbjct: 183 FEDEVKER--CPGAEWLSTDKYAGATRDSAMREAGPLILQFGNQVDGIFAPNESSASGTA 240 Query: 228 QALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEP 287 L AQGL+ KVA+ D ++ I G ++ + + +A V G++ Sbjct: 241 DVLRAQGLNQKVALMAFDGSKPLLQSIQQGDVIGSILQDPYRMGYLSAWYCVRHLRGED- 299 Query: 288 KADTTLNNGLKDV----PSRLLTPIDVN 311 +NNG +++ L+T +V Sbjct: 300 -----MNNGRREMSEGTGEYLITAENVT 322 >UniRef50_B8I0K4 Periplasmic binding protein/LacI transcriptional regulator n=11 Tax=Clostridiales RepID=B8I0K4_CLOCE Length = 342 Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats. Identities = 79/334 (23%), Positives = 132/334 (39%), Gaps = 42/334 (12%) Query: 1 MKIKNILLTLCTSLLLTNV------------------------AAHAKEVKIGMAIDDLR 36 MK K I L +C SL++ + K + IG + Sbjct: 1 MKKKLIALLMCFSLVIAAGCGASDTNSSDSESSESAQSTSANDSGSNKLITIGFSQVGAE 60 Query: 37 LERWQKDRDIFVKKA-ESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVL 95 + + E G K+ A +E Q+ + + I++ VDV+ I P Sbjct: 61 SDWRVANTASMKSALSEKNGFKLIFADAQQKQENQIKAVRDFISQDVDVIAIAPVTETGW 120 Query: 96 SNVVKEAKQEGIKVLAYDRMINDAD---IDFYISFDNEKVGELQAKALVDIVPQG----- 147 V+ EAK I V+ DRMI +D ++ D +K G A+ LV+ + + Sbjct: 121 ETVLGEAKDADIPVIIVDRMIKVSDDSLFSCWVGSDFQKEGVNAAEWLVNYMKEKGKTDK 180 Query: 148 -NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALT 206 N ++ G+ + G +K Y + ++ Q + + ++ME+ L Sbjct: 181 QNVVVLQGTIGSSAEIGRTKGFGDTIKKYDN---FNILAQQTGE-FTQAKGQEVMESFLK 236 Query: 207 ANNNKIDAVVASNDATAGGAIQALSAQGLS--GKVAISGQDADLAGIKRIAAGTQTMTVY 264 N+ ID V+A ND A GAI AL A G + V I DA A K + AG ++V Sbjct: 237 QYND-IDVVIAQNDNMAFGAIDALKAAGKAPGKDVTIVSFDAVKAAFKSMIAGDMNVSVE 295 Query: 265 KPITLLANTAAEIAVELGNGQEPKADTTLNNGLK 298 L AE+A +L N ++ + ++ + Sbjct: 296 CNP-LHGPRVAELAKKLMNDEKVEKIQYVDEKVY 328 >UniRef50_A0LA89 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LA89_MAGSM Length = 374 Score = 184 bits (467), Expect = 4e-45, Method: Composition-based stats. Identities = 73/314 (23%), Positives = 128/314 (40%), Gaps = 17/314 (5%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAE-SLGAKVF 59 M+ ++ + L A ++G D L + F + + +V Sbjct: 69 MRTLPAIVMMTLYALAGLAHAQQPPWRVGFCQDTLDIPWRAAQAMTFSQTLQTDKRFQVI 128 Query: 60 VQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDA 119 + A GN Q +E+M+ RGV VLV P +G VL+ V+ ++G+ V+ R D Sbjct: 129 LSDAKGNTTQQAIDLEHMVERGVHVLVTSPRDGAVLTPVISNIYRQGVPVVLLSRRTLDE 188 Query: 120 DIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDS 178 + +I+ D+ ++G A+ L + +G ++ G + + G ++ L + Sbjct: 189 NFTTFIAPDDAEIGRQAARYLSKRLNEKGKILVIQGLGSASTTQQRTVGFIQELSLHP-- 246 Query: 179 GKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSG- 237 +++V Q + E A+ IME+ L DA+ +DA A GAI AL G+ Sbjct: 247 -HMQIVA-QPFANYKKEMAILIMESILAQKLP-FDAIYVHSDAMALGAILALKRAGIDPT 303 Query: 238 KVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGL 297 K+ I D AG + + G P + + GQ N Sbjct: 304 KLPIVSIDYTRAGRESLRKGEIDAIFTYPNGV--KQGITAVKRILAGQPV-------NKF 354 Query: 298 KDVPSRLLTPIDVN 311 + VPS L+T ++N Sbjct: 355 QTVPSTLVTQENIN 368 >UniRef50_C0DAQ0 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0DAQ0_9CLOT Length = 332 Score = 184 bits (467), Expect = 4e-45, Method: Composition-based stats. Identities = 64/281 (22%), Positives = 116/281 (41%), Gaps = 10/281 (3%) Query: 19 VAAHAKEVKIGMAIDDLRLERWQKDRDIFVK----KAESLGAKVFVQSANGNEETQMSQI 74 A+ ++ KI + L+ + + K A+ + ++ N E Q+ + Sbjct: 47 TASTGQKYKIAFIVKSLQSAFFINMTEAAEKCGQDYADKISVEIMAPQTPFNIEEQIQLV 106 Query: 75 ENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGE 134 E I +D +VI P + + + +K+A GI V+ + N DI Y+ N VG Sbjct: 107 EQCITNKMDAIVIAPCDSEGIVPAIKKANDAGILVVTANTKANGGDIVSYVGAQNFDVGY 166 Query: 135 LQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWL 193 A AL + + QG L+ G ++ ++ G + LK Y I+++ Q D W Sbjct: 167 SLATALFEKLGGQGKVILIEGKAGNSTSEERAEGFKEALKEYP---GIELLASQPAD-WD 222 Query: 194 PENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKR 253 +A+ +MEN L ++ID V+ G I+A+ + G ++ D D I Sbjct: 223 RASAMTVMENCLQTY-DQIDGVLTLTKDMGLGTIEAIKSAGRDKEIVSMTFDVDDDVISA 281 Query: 254 IAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLN 294 + AG + + A A AV +G + + + Sbjct: 282 LKAGDLYASGNQNEQSQAYIAIMTAVFALDGYKVDSSQIMP 322 >UniRef50_C0C2H6 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2H6_9CLOT Length = 342 Score = 184 bits (467), Expect = 4e-45, Method: Composition-based stats. Identities = 74/346 (21%), Positives = 140/346 (40%), Gaps = 47/346 (13%) Query: 3 IKNILLTLCTSLLLTNVAAHAKE-----------------VKIGMAIDDLRLERWQKDRD 45 + +L+ + T + ++ +KIG + +++Q +++ Sbjct: 11 LMTVLMIAMLAFAFTGCTSGPQKEEKTESKSNNDKSSLEGLKIGFCV--TNRDQFQTEQE 68 Query: 46 IFVKK-AESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQ 104 K+ +S G ++ V A + TQ+SQ+ + +N G D+L+I + + + ++ A Sbjct: 69 GIAKELCDSKGIELSVADAKEDISTQISQVSSFVNAGCDLLMINCVDAESIQEIINAAGD 128 Query: 105 EGIKVLAYDRMINDADI----DFYISFDNEKVGELQAKALVDIVPQGNY------FLMGG 154 + + ++RM +D + +Y+ + G K + + + N L G Sbjct: 129 --VPCVFFNRMPSDHSVFDENHYYVGMSDYDCGYDMGKFMAEWLKDNNKTDTADGVLFLG 186 Query: 155 SPVDNNAKLFRAGQMKVLKPYVDSG-KIKVVGDQWVDGWLPENALKIMENALTANNNKID 213 N G K L DSG K+ V + + W A+ + + K D Sbjct: 187 PLGATNTVSRTDGIKKGLA---DSGYKVNWVFEDTAE-WDRSKAMDKFTQFM-GSGKKFD 241 Query: 214 AVVASNDATAGGAIQALSAQGLSG--KVAISGQDADLAGIKRIAAGTQTMTVYKPITLLA 271 + A+ND A G I+AL+A G S I+G DA G+ + GT T T + + + Sbjct: 242 FIAANNDDMALGCIEALTAAGYSAPFDFPIAGIDATENGLLAVGDGTLTATFDQSPSKMT 301 Query: 272 NTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKD 317 N EIA + DT + +KD + + V +N+ D Sbjct: 302 NYCFEIAFAILQ------DTDMPEEVKDF-TWIYKAEMVTADNVDD 340 >UniRef50_B6BMJ9 Periplasmic binding protein/LacI transcriptional regulator, putative n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BMJ9_9PROT Length = 307 Score = 183 bits (466), Expect = 5e-45, Method: Composition-based stats. Identities = 70/323 (21%), Positives = 139/323 (43%), Gaps = 27/323 (8%) Query: 3 IKNILLTLCTSLLLTNVAA----HAKEVKIGMAIDDLRLE-RWQKDRDIFVKKAESLGAK 57 +K I + + + LL + + A +K I A D L + R ++ +++ + + Sbjct: 1 MKKIFIFIVSILLASILNAGELDKSKTYTIAFAQDTLNNDYRLKQVKEVEKALLKYPNIR 60 Query: 58 VFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIN 117 A + Q+ QIE+ I++GVD+L+ PY+ V+ +A + I V+ R + Sbjct: 61 FIYSDAKASASMQVKQIEDFISQGVDLLMTSPYDEDSTRQVISKAYKSNIPVVLVSRRVK 120 Query: 118 DADIDFYISFDNEKVGELQAKALVDIVP-QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYV 176 D YI +N ++ + AK LV + +G L+ G N ++ G +V+ Y Sbjct: 121 GNDFTSYIHPENRQIAKDAAKYLVKKMNYKGTVLLLKGVAKTNVERMRTEGFFEVVNKYP 180 Query: 177 DSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS 236 + IKV+ + +L +A+ ++ L+A K DAV++ +D+ G G+ Sbjct: 181 N---IKVI--ERTANYLRRDAIIEVDKLLSA-GQKFDAVMSQSDSMLVGVRMVFKKYGIK 234 Query: 237 GKVAIS-GQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNN 295 ++ G D I G Q + L A +A+IA+++ +G+ + L+ Sbjct: 235 PSSLVTVGIDYIKPAQDAIRDGEQNSSFVYS--LCAKESADIAIKILSGESVAKEIKLDT 292 Query: 296 GLKDVPSRLLTPIDVNKNNIKDT 318 + + N+ + Sbjct: 293 NQ------------ITRKNVDEI 303 >UniRef50_D2LSY2 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LSY2_BACS4 Length = 314 Score = 183 bits (466), Expect = 6e-45, Method: Composition-based stats. Identities = 66/325 (20%), Positives = 133/325 (40%), Gaps = 27/325 (8%) Query: 1 MKIKNILLTLCTSLLLTNVA---AHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAK 57 MK K + L + + LL+ + + E +G+A+ +A++L Sbjct: 1 MK-KVLFLLVASILLIVGCSEDTSGDGETVLGLAMPSATHGWMGALIQNAEDQAKALVED 59 Query: 58 VFVQS----ANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYD 113 + N Q++ +E++I +GVD +V++P LS + + ++ GI ++ D Sbjct: 60 GTIDDYIFTTADNPSAQVNNVEDLIAQGVDAIVMLPIESDALSPIALQVEEAGIPLVIVD 119 Query: 114 RMINDADIDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLK 173 R + + + DN G + ++ + + P ++ + G + + Sbjct: 120 RELTNDAATVVVKGDNYGAGVNAGEYFMEQLGGNGKVVEIAGPSNSVTQQRSDGFREAI- 178 Query: 174 PYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQ 233 + I++V Q + + E +L++MEN LT+ +IDAV +D A G +QA++ Sbjct: 179 ---EGSDIEIVASQSGE-FSTETSLQVMENILTSQ-PEIDAVYTQDDGMALGVLQAINEA 233 Query: 234 GLSGKVAISGQDADLAGIKRIA-AGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTT 292 + I+G + I G T T L+ I +L NG++P + Sbjct: 234 NRTDIQFITGVAGSKDVYEIIMDDGLITATFLYSP-LMVKEGVIIGADLANGEDPDSAEV 292 Query: 293 LNNGLKDVPSRLLTPIDVNKNNIKD 317 + + V K+N+ D Sbjct: 293 V-----------VPATPVTKDNVDD 306 >UniRef50_A6WVL9 Monosaccharide-transporting ATPase n=17 Tax=Proteobacteria RepID=A6WVL9_OCHA4 Length = 300 Score = 183 bits (466), Expect = 6e-45, Method: Composition-based stats. Identities = 70/314 (22%), Positives = 129/314 (41%), Gaps = 19/314 (6%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFV 60 M K++ L + + L +A A IG ++ + + D K+A++ + V Sbjct: 1 MFRKSLSRILFSGVALAMMAGAASAEGIGASLLTQQHPFYIALADAMKKEAQAENVPLEV 60 Query: 61 QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD 120 AN + Q++ +E+ I +GVDV++I P + + + + + +A++ GIKV+ D N+ D Sbjct: 61 SIANQDLSKQLADVEDFITKGVDVIIISPVDSKGVRSAINKAEKAGIKVITVDVPANNVD 120 Query: 121 IDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGK 180 + ++ DN GE A+ + + + + P + G K + Y D Sbjct: 121 VTSFVGTDNFAGGEKAAELMAKTIGEKGNVAVIDYPTVQSVVDRIEGFKKGIAKYPD--- 177 Query: 181 IKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVA 240 IK+V Q G AL +N L AN + I + D A A A+ + L +V Sbjct: 178 IKIVAIQP--GITRPEALSAAQNILQANPD-IVGIFGFGDDAALAAASAVKSAKLENQVK 234 Query: 241 ISGQDADLAGIKRIAAG-TQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKD 299 + G D + + + + A E A ++ G+E A Sbjct: 235 VIGFDGMEEARNAVKNDPVMVGVIAQYPDQMGKVAVETAAKVIKGEEVPAK--------- 285 Query: 300 VPSRLLTPIDVNKN 313 + + P V K+ Sbjct: 286 ---QPIVPGVVTKD 296 >UniRef50_UPI0001BCF79F D-galactose-binding periplasmic protein precursor n=1 Tax=Mannheimia haemolytica serotype A2 str. BOVINE RepID=UPI0001BCF79F Length = 333 Score = 183 bits (466), Expect = 6e-45, Method: Composition-based stats. Identities = 72/338 (21%), Positives = 140/338 (41%), Gaps = 28/338 (8%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAK-EVKIGMAIDDLRLERWQKDRDIFVKKAESL-GAKV 58 MK +++L +L+L A++A+ E +IG+ I R K+ + K Sbjct: 4 MK-RSLLNAFVYTLMLGANASYAQSEPRIGVTIYKYDDNFMMLMRKEMNKEMANFSHLKW 62 Query: 59 FVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRM--- 115 F+ A ++ Q+ QIE ++ V+VL + + +V++AK + V+ ++R Sbjct: 63 FMNDAQNSQVKQLKQIETLLKHQVNVLAVNIVHANESKTIVEKAKLSNVPVVFFNRSSDN 122 Query: 116 --INDADIDFYISFDNEKVGELQAKALVDIVPQG-----------NYFLMGGSPVDNNAK 162 + D +++S D ++ G +Q + + + + L+ G P D +A+ Sbjct: 123 QALESYDKAYFVSSDPKEAGRIQGELIAKVWKSNPDFDLNKDGKLQFVLLKGEPSDVSAE 182 Query: 163 LFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTAN-NNKIDAVVASNDA 221 +A + + V + +I W A M L N +I+ V+++ND Sbjct: 183 RSQAVVESLNQQGVQAEEIY----SDTARWRRTLARNKMNEWLVENRAAEIEVVISNNDE 238 Query: 222 TAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVEL 281 A GA+ AL+A ++ I G DA + + G TV + A ++ L Sbjct: 239 MAIGALDALNAH--EKRLPIFGIDALPETLALMKKGEIAGTVLNDSSAQAKAVVKLVSNL 296 Query: 282 GNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTV 319 G+ DT + + L I ++K N+ + Sbjct: 297 AQGKPALKDTQWESHSSK--TIYLPHIGIDKENLGQFL 332 >UniRef50_B0PA90 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PA90_9FIRM Length = 338 Score = 183 bits (465), Expect = 7e-45, Method: Composition-based stats. Identities = 65/307 (21%), Positives = 125/307 (40%), Gaps = 21/307 (6%) Query: 17 TNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSA--NGNEETQMSQI 74 + A ++ G+ + + W +D + +++G ++ N + + Q+S + Sbjct: 42 SAADAPDDKLTFGLVVMSTNSDYWLTLKDGAQEAVDAIGGELVFTGPADNNDIQGQVSLM 101 Query: 75 ENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGE 134 EN+IN VD +++ P + L+ V++A GI V+ D +N +I+ DN G Sbjct: 102 ENLINSKVDAILLTPLDSDALAAPVEKAMDAGIPVIVIDSAVNTDKYTSFIATDNVAGGR 161 Query: 135 LQAKALVD-IVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWL 193 + + L++ I G ++ + G + I V+ Q Sbjct: 162 MAMERLIESIGGSGEVVVVNALAGIPSNDARGQGAEEYAAT---VDGITVLPQQHCL--D 216 Query: 194 PENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKR 253 A+ EN + N N + + A+ + A GA QA+ ++G +G++ + DAD IK Sbjct: 217 QAEAMTATENVIIGNPN-LKGIFATFNRGALGAAQAIVSKGKAGEIKMVAFDADADEIKL 275 Query: 254 IAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKN 313 + GT V + + E AV+ NG+E + + K+ Sbjct: 276 LEDGTIDALVVQQPYEMGKIGIEYAVKALNGEEVPK------------TVAPEVVIATKD 323 Query: 314 NIKDTVI 320 N+ D I Sbjct: 324 NMNDEAI 330 >UniRef50_C0CNG0 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CNG0_9FIRM Length = 387 Score = 183 bits (465), Expect = 7e-45, Method: Composition-based stats. Identities = 75/332 (22%), Positives = 151/332 (45%), Gaps = 28/332 (8%) Query: 25 EVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDV 84 EV IG+ + W D E G V V+ A G+ Q +QI+ + ++ V Sbjct: 50 EVVIGVCTPKQPTDTWSGDVGNLKAGLEEEGWTVKVKEA-GDGAEQAAQIQELADQEVSA 108 Query: 85 LVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD-IDFYISFDNEKVGELQAKAL--- 140 L++ P + +S + + +++ I V++Y R++ + D +++Y+ FD+E G+ K + Sbjct: 109 LILAPVEPEAVSEALADYEEKEIPVISYSRLVPNTDAVNYYVGFDSEAAGQETGKYIESA 168 Query: 141 --VDIVPQGNYF----LMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQW------ 188 ++ + G D + + F G M+VLKPY + G ++ + Sbjct: 169 KDLENAKDAGKIYTIEFLLGDSEDLDTQFFYEGLMEVLKPYFEEGVLQSKSGRTEFMDLC 228 Query: 189 VDGWLPENALKIMENALTANNNK--IDAVVASNDATAGGAIQALSAQGLS------GKVA 240 ++ + +++ L+ + +D V D G +AL + Sbjct: 229 LNSYQAQDSKAKTSEILSQFYGEKALDIVCVETDQMVDGVEEALVESSYALHSSEHPWPV 288 Query: 241 ISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADT--TLNNGLK 298 ++GQDA + I+R+ +G Q +TV + LL + +I + +G++ K +T +NG + Sbjct: 289 LTGQDASESAIRRVLSGQQGITVSREYELLDESCVDILKDKLSGEKVKVNTSRKYDNGSR 348 Query: 299 DVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 VP++L ++ +N K ++ G + E EL Sbjct: 349 IVPAQLSDVQLIDLDNYK-ILMDMGIYTEEEL 379 >UniRef50_C8VY22 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VY22_DESAS Length = 436 Score = 183 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 78/316 (24%), Positives = 141/316 (44%), Gaps = 17/316 (5%) Query: 8 LTLCTSLLLTNVAAH------AKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQ 61 + + LLT +++VKIG+ + D+ + + + I ++A+ G Q Sbjct: 4 VIFFVAFLLTGCPDKGEQKPVSQKVKIGVCLADMERDGNRIIKKIMTERAQKEGISFTWQ 63 Query: 62 SANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADI 121 A + E Q QI ++ + V +++ + + + ++GIK +A + + + + Sbjct: 64 DAGNDAEKQQEQINELVKKKVKAVILQAVDPSAGPAIARTLTEKGIKTVALETLPANTPL 123 Query: 122 DFYISFDNEKVGELQAKALVDIVPQGN------YFLMGGSPVDNNAKLFRAGQMKVLKPY 175 D Y++ D+ +VGELQA+ ++ G ++ G P D A+ A VLK Sbjct: 124 DAYVASDHGRVGELQARYALEQSAAGGKTEGLRILVLQGDPSDLAAREITAANEAVLKGD 183 Query: 176 VDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGL 235 +KV + D P A +EN L A K+DAV+A++ A A+Q L+ + L Sbjct: 184 KRVADLKVQSNLRAD---PGLARVAVENTLAA--GKLDAVLANDSRLAMAAVQVLTERNL 238 Query: 236 SGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNN 295 + +V G AD ++ IA+G V LLA + AVEL + + N Sbjct: 239 AAQVVTVGVGADSKSVRGIASGQHDAEVDNSPELLAQYITDAAVELAKTGHWQYTGHVPN 298 Query: 296 GLKDVPSRLLTPIDVN 311 G DV +++ + Sbjct: 299 GQYDVATKITPVRLIT 314 >UniRef50_B0PGZ6 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGZ6_9FIRM Length = 374 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 65/269 (24%), Positives = 130/269 (48%), Gaps = 8/269 (2%) Query: 20 AAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMIN 79 A A ++ G+ + D+ + + + K AE G +V +SA+GN + Q+S IEN I Sbjct: 54 AGGADKIVCGVVLIDMTNQFFVDMIEGGNKAAEDYGCEVIWKSADGNFDNQISLIENFIE 113 Query: 80 RGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKA 139 +GVD +++ P + + L V+++A GI + + D + ++ +++E+ + A+ Sbjct: 114 QGVDCILVDPLDSEGLKPVIEKASAAGIPTITMAGQV-DVETNYTTVYNDEENTRIIAEM 172 Query: 140 LVDIVP-QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENAL 198 ++ +G L+ G+ + + L + G ++ Y + I VV +Q W P + Sbjct: 173 TAKMIGEEGKTALLYGNKGNLVSDLRQKGYYAGMEKYPN---ITVV-EQPT-NWDPPTGM 227 Query: 199 KIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGT 258 K ++ L A N + A+ +DA A QA+ G G++ ++ D + +K + +G Sbjct: 228 KAAQD-LIAANPDLKAIHCISDAVTLAAYQAVKTAGKEGEIIVTSYDGNDDALKAVESGQ 286 Query: 259 QTMTVYKPITLLANTAAEIAVELGNGQEP 287 T TV ++A++L +G P Sbjct: 287 FTSTVLTGAKKTGYWNIQVALQLASGVRP 315 >UniRef50_A5ZT86 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZT86_9FIRM Length = 318 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 73/308 (23%), Positives = 134/308 (43%), Gaps = 23/308 (7%) Query: 2 KIKNILLTLCTSLLLTNVAAHAKE---------VKIGMAIDDLRLERWQKDRDIFVKK-A 51 KI ++L ++LLT ++K+ IG+++ ++ D+F +K + Sbjct: 6 KIWTVILVAAATVLLTISTQYSKKEEISTDSYQYLIGVSLPNVIEPWLNNFVDVFTEKVS 65 Query: 52 ESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLA 111 + V + A GN E Q+ IE ++ G+D+L++ P LS+V+ EA Q+ I V+ Sbjct: 66 QDKKINVIFRDAAGNPEKQIQDIETLMEYGIDILIVSPDGSDSLSSVLSEAFQK-IPVIL 124 Query: 112 YDRMINDADIDFYISFDNEKVGELQAKALVDIVPQGN--YFLMGGSPVDNNAKLFRAGQM 169 D I D++K+G L + +++ + + N + G +K G Sbjct: 125 TGVGAGTEDYTCLIKSDDQKIGRLAGEYILNNLYEKNKKIVVFQGVEESPVSKQRLKGFQ 184 Query: 170 KVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQA 229 ++ + I + WL + A M++ L ++ + D V A ND A GA QA Sbjct: 185 DSVQGTIPEEDITY----YCGDWLRDRAELRMKDYLISH-DSADIVFAFNDDMAYGAYQA 239 Query: 230 LSAQGLSGKVAISGQD---ADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQE 286 + GKV + G D + AG+ + G T+ P + EIA +L G + Sbjct: 240 CQQYRIEGKVHLIGVDGFEGESAGLSLVDKGVLDATIQTP--DFGGLSYEIARKLLEGNK 297 Query: 287 PKADTTLN 294 + + + Sbjct: 298 VEKNIIIQ 305 >UniRef50_A8RPX4 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RPX4_9CLOT Length = 362 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 62/321 (19%), Positives = 128/321 (39%), Gaps = 32/321 (9%) Query: 18 NVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQ--SANGNEETQMSQIE 75 + + + IG L E + +AE+ G K+ VQ + + + Q+ IE Sbjct: 64 AASGNYGDKTIGFVGMTLNNEYHITLANGAKVEAEAKGVKIEVQAGDQHASADAQLGIIE 123 Query: 76 NMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDA-------DIDFYISFD 128 NMI VD ++++P + L + + + K+ GI ++ D + D DI FY + Sbjct: 124 NMIANKVDGILLVPSSSDGLESALTKCKEAGIPIINLDTKLTDESLANVGLDIPFY-GTN 182 Query: 129 NEKVGELQAKALVDIVPQG-NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQ 187 N + +L + + +G ++ G NA G ++ + VV +Q Sbjct: 183 NYEGAKLAGEYVAKNFEKGTKTAILKGIEGQTNAADRYNGFIEG-----AGDTVTVVAEQ 237 Query: 188 WVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDAD 247 W + +N ++AN + ++ ND GA++A+ + ++ I G DA Sbjct: 238 TA-NWEVDQGYTAAQNIISANPD-VELFFCCNDNMGIGALRAIKEANMQEQIQIIGFDAV 295 Query: 248 LAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTP 307 + + G TV + + + +++ +G +A++ ++ G Sbjct: 296 SEALNLVENGEFLATVAQYPAEMGKLGVDNMLKIFDGG--EAESYIDTGT---------- 343 Query: 308 IDVNKNNIKDTVIKDGFHKES 328 + K+N+ + KD Sbjct: 344 EVITKDNVGE--FKDYLKTFE 362 >UniRef50_A4TQ38 Sugar ABC transporter, periplasmic protein n=30 Tax=Proteobacteria RepID=A4TQ38_YERPP Length = 313 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 79/322 (24%), Positives = 126/322 (39%), Gaps = 20/322 (6%) Query: 1 MKIKNILLTLCTSLL-LTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVF 59 MK + L +L+ + VA A I + ++ + + KA LG Sbjct: 1 MKNTLLKSCLTAALISMAGVAGAASNGLIAIITPSHDNPFFKAEAEGAKAKATELGYTTL 60 Query: 60 VQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDA 119 V S + + Q IE I R +++ +K+AK GI DR IN+ Sbjct: 61 VASHDDDVNKQNQLIETAIARKAKAIILDNAGSDATIGPLKKAKAAGIPAFLIDREINET 120 Query: 120 DID-FYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVD 177 I I +N + +L A+ V ++ +G Y + G D NA + G V+ + D Sbjct: 121 GIAVSQIVSNNYQGAQLGAEKFVTLMGGKGKYIELLGRESDTNAHVRSQGYHDVIDEHSD 180 Query: 178 SGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSG 237 +K+V Q W A ME+ L AN + I V++ ND A GA AL A G + Sbjct: 181 ---MKMVAQQTA-NWSQTEAFNRMESILQANPD-ITGVISGNDTMALGAEAALKAAGRND 235 Query: 238 KVAISGQDADLAGIKRIA-AGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNG 296 V + G D I G TV +P A A A + + + Sbjct: 236 -VVVVGFDGSDYVRDSIINNGNIKATVLQPGWAQAQMAVVQADQYLKTGKTGLEEK---- 290 Query: 297 LKDVPSRLLTPIDVNKNNIKDT 318 +L+ + +++NN K+ Sbjct: 291 ------QLMDCVLIDENNAKNL 306 >UniRef50_A6BDP6 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BDP6_9FIRM Length = 309 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 65/307 (21%), Positives = 122/307 (39%), Gaps = 18/307 (5%) Query: 8 LTLCTSLLLTNVAAHAKE----VKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSA 63 + CT+L + K+ +K G + + + + ++ G + + Sbjct: 6 IVACTTLFIAIGIHEKKDTRKQLKFGATYMTMNNPYFVNMDENIEESVQAKGDILITRDP 65 Query: 64 NGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD-ID 122 +++ Q QI++MIN G+DVL + P + + ++ K++ I V D ++D + + Sbjct: 66 LQDQKKQNEQIKDMINEGIDVLFLQPVDRNKVRPALELCKKKHIPVFVIDSEVSDTEAVV 125 Query: 123 FYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIK 182 I DN G AK ++ N ++ + N+ G +K + + K Sbjct: 126 STIVSDNYDAGVQCAKDMMKKKTSANIIIVNQKAL-NSINERVKGFRDTIKGHP---QYK 181 Query: 183 VVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAIS 242 +V ++ E A+K+ME + N D V+ ND A G I A+ + +V + Sbjct: 182 IVEEKESAAEF-EIAMKVMEKIIYEKKNY-DVVMGGNDPIALGCIAAMQMTDKTDQVMVY 239 Query: 243 GQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPS 302 G D G I AG T + + A + A G+ K T +P Sbjct: 240 GVDGSPDGKAMIKAGFLEGTAAQSPIKIGEKAVQTAYSYLAGETVKKHVT-------IPV 292 Query: 303 RLLTPID 309 L+T + Sbjct: 293 ELITADN 299 >UniRef50_C6CXV0 D-galactose/D-glucose ABC transporter, periplasmic D-galactose/D-glucose-binding protein n=15 Tax=Firmicutes RepID=C6CXV0_PAESJ Length = 366 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 69/325 (21%), Positives = 134/325 (41%), Gaps = 32/325 (9%) Query: 16 LTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIE 75 A KE +G+AI R+ ++ + AKV + + ++ TQ +++ Sbjct: 49 AAESPAVKKEPTVGVAIYKFDDTFMTGVRNAIEAASQGV-AKVDIVDSQNSQPTQNDKVD 107 Query: 76 NMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI-----NDADIDFYISFDNE 130 I + + + I + S ++ +AK V+ ++R N D+ +Y+ E Sbjct: 108 LFITKKYNAMAINAVDRTAASMIIDKAKSANTPVVFFNREPLAEDMNKWDLVYYVGAKAE 167 Query: 131 KVGELQAKALVDIV-----------PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSG 179 + G + + ++D + Y ++ G P +A+L ++ + Sbjct: 168 ESGTMSGELIIDYWKAHPEMDKNKDGKLQYIMLKGEPGHQDAELRTKYSIQAITDA--GI 225 Query: 180 KIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGK- 238 ++ + + W A M L+A+ +KI+AV+A+ND A GAI+AL A G Sbjct: 226 GVEKLAEDTA-MWDRVKAQDKMATFLSAHGDKIEAVLANNDDMALGAIEALKAAGYFKDG 284 Query: 239 --VAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTT---- 292 + + G DA A ++ ++ GT TV ++A L NG+ P T Sbjct: 285 KFMPVVGVDATAAALQALSEGTLLGTVLNDAKNQGAATLKLAAALANGETPSKVNTGFDI 344 Query: 293 LNNGLKDVPSRLLTPIDVNKNNIKD 317 ++ VP + + K+N+ D Sbjct: 345 TDSKYVWVPYK-----KITKDNMSD 364 >UniRef50_B1ZDA2 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Methylobacterium populi BJ001 RepID=B1ZDA2_METPB Length = 308 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 75/311 (24%), Positives = 128/311 (41%), Gaps = 16/311 (5%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAE-SLGAKVF 59 MK + L L+ A A E K+ + + + V A A V Sbjct: 1 MKQRTNPLPAALLLIALAAPAAAAETKLTFLMPEAGDRFLDSLQSAVVSTAASKFSASVE 60 Query: 60 VQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDA 119 V A G ETQ+ Q ++ L++ P + + + + GI ++ +R + Sbjct: 61 VAQAAGKGETQVVQARAALDAKPAALIVTPVDDASARTITEMSAAAGIPLVFVNRRPSGP 120 Query: 120 DID--FYISFDNEKVGELQAKALVDIVPQ-GNYFLMGGSPVDNNAKLFRAGQMKVLKPYV 176 + +S ++ G +Q + L + GN ++ G DN A+ AG ++L Sbjct: 121 VTNRMAIVSANHLVAGRVQMRMLAQRLGDRGNVAILRGKDSDNAAQERTAGVKEILGQRP 180 Query: 177 DSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS 236 +K++ + D W A + L + K DA+ A+ND A GA+ AL A GLS Sbjct: 181 ---GLKLLAEASAD-WSRRQAQDQVTAWL-RSGLKFDAIAANNDEMALGAVAALKAAGLS 235 Query: 237 GKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNG 296 GK+ + G D GI + +G +++V + L A AV+L G+ + Sbjct: 236 GKILVGGVDGTSDGIAAVKSGDVSVSVLQDAPLQGAQAVNDAVKLARGEYVQP------- 288 Query: 297 LKDVPSRLLTP 307 VP +L+ P Sbjct: 289 YDWVPHQLILP 299 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_C9Y333 D-xylose-binding periplasmic protein n=20 Tax=Pr... 332 8e-90 UniRef50_Q2RGX1 Periplasmic binding protein/LacI transcriptional... 324 3e-87 UniRef50_P45047 D-xylose-binding periplasmic protein n=193 Tax=B... 317 5e-85 UniRef50_A6TRZ6 Monosaccharide-transporting ATPase n=1 Tax=Alkal... 302 9e-81 UniRef50_B5JEL4 Putative uncharacterized protein n=1 Tax=Verruco... 298 2e-79 UniRef50_C7REM6 Periplasmic binding protein/LacI transcriptional... 298 2e-79 UniRef50_C6J071 ABC-type ribose transport system n=7 Tax=Bacteri... 297 4e-79 UniRef50_Q65E53 RbsB n=6 Tax=Firmicutes RepID=Q65E53_BACLD 290 6e-77 UniRef50_C8WRM5 Periplasmic binding protein/LacI transcriptional... 288 1e-76 UniRef50_P36949 D-ribose-binding protein n=274 Tax=Bacteria RepI... 288 2e-76 UniRef50_C6QL47 Periplasmic binding protein/LacI transcriptional... 281 3e-74 UniRef50_B8I3W5 Periplasmic sugar-binding protein n=2 Tax=Clostr... 280 5e-74 UniRef50_B9MLQ1 Monosaccharide-transporting ATPase n=1 Tax=Anaer... 280 6e-74 UniRef50_D2QJX6 Periplasmic binding protein/LacI transcriptional... 279 8e-74 UniRef50_A8S312 Putative uncharacterized protein n=1 Tax=Clostri... 279 1e-73 UniRef50_C1D8A9 RbsB n=14 Tax=Bacteria RepID=C1D8A9_LARHH 278 1e-73 UniRef50_C0C295 Putative uncharacterized protein n=1 Tax=Clostri... 278 2e-73 UniRef50_Q03CA2 ABC-type sugar transport system, periplasmic com... 277 4e-73 UniRef50_B0K235 Monosaccharide-transporting ATPase n=9 Tax=Clost... 276 5e-73 UniRef50_C8WRB6 Xylose binding protein transport system n=2 Tax=... 276 7e-73 UniRef50_Q98LI2 Periplasmic ribose-binding protein n=2 Tax=Prote... 273 4e-72 UniRef50_C3QNV9 Sensor protein n=5 Tax=Bacteroides RepID=C3QNV9_... 272 1e-71 UniRef50_C6W799 Monosaccharide-transporting ATPase n=1 Tax=Dyado... 272 1e-71 UniRef50_D1AGX3 Periplasmic binding protein/LacI transcriptional... 270 4e-71 UniRef50_B1KZY7 D-ribose-binding protein n=3 Tax=Clostridium bot... 269 1e-70 UniRef50_C5VU40 D-ribose-binding protein n=4 Tax=Bacteria RepID=... 268 2e-70 UniRef50_Q7MEU9 ABC-type sugar transport system, periplasmic com... 265 1e-69 UniRef50_A8GD74 Periplasmic binding protein/LacI transcriptional... 265 2e-69 UniRef50_Q48J93 Sugar ABC transporter, periplasmic sugar-binding... 265 2e-69 UniRef50_Q97JD5 Periplasmic sugar-binding protein n=1 Tax=Clostr... 264 2e-69 UniRef50_D2BKS5 Ribose ABC transporter, substrate binding protei... 264 4e-69 UniRef50_Q2SMT1 ABC-type sugar transport system, periplasmic com... 264 4e-69 UniRef50_A5F1B8 Ribose ABC transporter, periplasmic D-ribose-bin... 263 5e-69 UniRef50_B8I2K0 Periplasmic binding protein/LacI transcriptional... 259 7e-68 UniRef50_A5ZMP8 Putative uncharacterized protein n=1 Tax=Ruminoc... 259 1e-67 UniRef50_Q7UNV9 Bifunctional carbohydrate binding and transport ... 259 1e-67 UniRef50_B1B7W7 D-ribose-binding periplasmic protein n=1 Tax=Clo... 258 1e-67 UniRef50_B1G9I5 Monosaccharide-transporting ATPase n=2 Tax=Burkh... 258 2e-67 UniRef50_A4AIX2 Solute-binding protein n=1 Tax=marine actinobact... 258 2e-67 UniRef50_Q11DN9 D-xylose ABC transporter, periplasmic substrate-... 258 3e-67 UniRef50_Q0SSJ2 Ribose ABC transporter, ribose-binding protein n... 258 3e-67 UniRef50_A6L0Y3 Sensor protein n=17 Tax=Bacteroides RepID=A6L0Y3... 258 3e-67 UniRef50_C5EHH7 Periplasmic binding protein/LacI transcriptional... 256 8e-67 UniRef50_C5ESX5 Multiple sugar-binding periplasmic receptor chvE... 256 8e-67 UniRef50_A8GZV8 Monosaccharide-transporting ATPase n=29 Tax=Gamm... 255 1e-66 UniRef50_Q9KAG4 Sugar ABC transporter (Sugar-binding protein) n=... 255 2e-66 UniRef50_A9KQP6 Putative solute-binding component of ABC transpo... 254 3e-66 UniRef50_B0NEL2 Putative uncharacterized protein n=1 Tax=Clostri... 254 4e-66 UniRef50_Q2KAX1 Probable sugar ABC transporter, substrate-bindin... 253 9e-66 UniRef50_B1G1G9 Monosaccharide-transporting ATPase n=1 Tax=Burkh... 253 9e-66 UniRef50_A0QT42 ABC transporter n=2 Tax=Actinomycetales RepID=A0... 252 1e-65 UniRef50_D1PSG1 Sugar ABC transporter, periplasmic sugar-binding... 252 1e-65 UniRef50_A4XMF2 Monosaccharide-transporting ATPase n=1 Tax=Caldi... 252 2e-65 UniRef50_Q8RBP9 Periplasmic sugar-binding proteins n=1 Tax=Therm... 250 4e-65 UniRef50_B4DBL5 Monosaccharide-transporting ATPase n=1 Tax=Chtho... 250 5e-65 UniRef50_A5FZZ2 Monosaccharide-transporting ATPase n=1 Tax=Acidi... 250 5e-65 UniRef50_P25548 Multiple sugar-binding periplasmic receptor chvE... 250 5e-65 UniRef50_C1DLC8 ABC transporter substrate binding protein n=3 Ta... 249 7e-65 UniRef50_B9XK02 Periplasmic binding protein/LacI transcriptional... 249 8e-65 UniRef50_B9KA11 Ribose ABC transporter, periplasmic ribose-bindi... 249 8e-65 UniRef50_A8GD77 Periplasmic binding protein/LacI transcriptional... 249 9e-65 UniRef50_A9CF36 ABC transporter, substrate binding protein (Suga... 249 1e-64 UniRef50_C5VEK6 D-ribose-binding periplasmic protein n=3 Tax=Cor... 249 1e-64 UniRef50_Q1Z3C1 Putative sugar ABC transporter, periplasmic suga... 249 1e-64 UniRef50_A8RW63 Putative uncharacterized protein n=1 Tax=Clostri... 248 2e-64 UniRef50_C9MXF0 Putative uncharacterized protein n=1 Tax=Leptotr... 248 2e-64 UniRef50_UPI000185D1D6 putative DNA-binding response regulator/s... 248 2e-64 UniRef50_C7M5H3 Sensor protein n=1 Tax=Capnocytophaga ochracea D... 248 3e-64 UniRef50_D2QME7 Two component transcriptional regulator, AraC fa... 247 3e-64 UniRef50_C5VG88 Sensor protein n=2 Tax=Prevotella RepID=C5VG88_9... 247 5e-64 UniRef50_Q98J19 Ribose-binding protein of ribose ABC transporter... 246 7e-64 UniRef50_B3T6P5 Putative periplasmic binding protein and sugar b... 246 1e-63 UniRef50_C6JDF0 Monosaccharide-transporting ATPase n=1 Tax=Rumin... 245 1e-63 UniRef50_A5ZT83 Putative uncharacterized protein n=1 Tax=Ruminoc... 245 1e-63 UniRef50_UPI0001B4C057 putative D-ribose-binding protein compone... 245 1e-63 UniRef50_B8D164 ABC-type sugar transport system, periplasmic com... 245 2e-63 UniRef50_B0P8T4 Putative uncharacterized protein n=1 Tax=Anaerot... 245 2e-63 UniRef50_Q9K631 Rhizopine ABC transporter (Rhizopine-binding pro... 244 2e-63 UniRef50_C2AIY5 Monosaccharide ABC transporter substrate-binding... 244 4e-63 UniRef50_Q65S41 RbsB protein n=8 Tax=Pasteurellaceae RepID=Q65S4... 244 4e-63 UniRef50_A6UHJ3 Periplasmic binding protein/LacI transcriptional... 243 7e-63 UniRef50_B1VWK1 Putative ABC transporter solute-binding protein ... 243 7e-63 UniRef50_P49308 Putative rhizopine-binding protein n=37 Tax=Prot... 243 9e-63 UniRef50_A1TPE5 Periplasmic binding protein/LacI transcriptional... 242 1e-62 UniRef50_B0PDL3 Putative uncharacterized protein n=1 Tax=Anaerot... 242 1e-62 UniRef50_A4F8A2 Binding protein/LacI transcriptional regulator n... 241 2e-62 UniRef50_C7MA39 Monosaccharide-binding protein n=1 Tax=Brachybac... 241 3e-62 UniRef50_B0NBQ1 Putative uncharacterized protein n=1 Tax=Clostri... 241 4e-62 UniRef50_D1PGX0 Putative DNA-binding response regulator/sensor h... 240 4e-62 UniRef50_A6LHB1 Sensor protein n=4 Tax=Bacteroidales RepID=A6LHB... 240 4e-62 UniRef50_A6E6Q9 Sensor protein n=1 Tax=Pedobacter sp. BAL39 RepI... 240 4e-62 UniRef50_D2Q1K0 Xylose ABC transporter, substrate-binding protei... 240 6e-62 UniRef50_B1WQL3 Putative ribose ABC transporter n=1 Tax=Cyanothe... 240 6e-62 UniRef50_B2IJW8 Periplasmic binding protein/LacI transcriptional... 239 8e-62 UniRef50_B2J7A7 Periplasmic binding protein/LacI transcriptional... 239 9e-62 UniRef50_D1ANT2 Periplasmic binding protein/LacI transcriptional... 239 1e-61 UniRef50_C6CIQ9 Periplasmic binding protein/LacI transcriptional... 239 1e-61 UniRef50_D1AQW5 Periplasmic binding protein/LacI transcriptional... 238 2e-61 UniRef50_A1R5X6 D-ribose-binding protein n=1 Tax=Arthrobacter au... 238 2e-61 UniRef50_A8RZI4 Putative uncharacterized protein n=1 Tax=Clostri... 238 3e-61 UniRef50_B9JQF4 Sugar-binding transcriptional regulator, LacI fa... 238 3e-61 UniRef50_A7V0S7 Sensor protein n=6 Tax=Bacteroides RepID=A7V0S7_... 238 3e-61 UniRef50_Q1R0N3 Periplasmic binding protein/LacI transcriptional... 238 3e-61 UniRef50_A9FWH4 LACI-type transcriptional regulator n=1 Tax=Sora... 237 3e-61 UniRef50_Q47NL4 Solute-binding protein n=26 Tax=Actinomycetales ... 237 4e-61 UniRef50_D0LRU4 D-xylose transporter subunit XylF n=1 Tax=Halian... 237 4e-61 UniRef50_A0LXA2 Sensor protein n=1 Tax=Gramella forsetii KT0803 ... 237 4e-61 UniRef50_A4TI53 Sugar ABC transporter periplasmic binding protei... 237 4e-61 UniRef50_D2R5M8 Periplasmic binding protein/LacI transcriptional... 237 4e-61 UniRef50_C0C0J1 Putative uncharacterized protein n=1 Tax=Clostri... 237 5e-61 UniRef50_A9KQP5 Periplasmic binding protein/LacI transcriptional... 237 5e-61 UniRef50_Q28MQ8 Periplasmic binding protein/LacI transcriptional... 236 7e-61 UniRef50_C6AR66 Periplasmic binding protein/LacI transcriptional... 236 7e-61 UniRef50_A6VWG6 Periplasmic binding protein/LacI transcriptional... 236 8e-61 UniRef50_C3KN00 Periplasmic ribose-binding protein n=1 Tax=Rhizo... 236 8e-61 UniRef50_C8P3T0 D-galactose-binding periplasmic protein n=1 Tax=... 236 1e-60 UniRef50_UPI0001BC53E3 D-xylose ABC transporter, periplasmic sub... 236 1e-60 UniRef50_A4IPB9 D-ribose-binding periplasmic protein n=2 Tax=Geo... 236 1e-60 UniRef50_A1WLB7 Periplasmic binding protein/LacI transcriptional... 236 1e-60 UniRef50_D2Q8V2 ABC transporter (Substrate-binding protein) n=2 ... 236 1e-60 UniRef50_Q3MB45 Periplasmic binding protein/LacI transcriptional... 236 1e-60 UniRef50_Q2RKU7 Periplasmic binding protein/LacI transcriptional... 236 1e-60 UniRef50_UPI0001C31C00 xylose binding protein transport system n... 235 1e-60 UniRef50_A8F472 Periplasmic binding protein/LacI transcriptional... 235 2e-60 UniRef50_A6C460 Ribose ABC transporter (Ribose-binding periplasm... 235 2e-60 UniRef50_D1PGW4 Sensor protein n=1 Tax=Prevotella copri DSM 1820... 234 2e-60 UniRef50_C1RNE3 Monosaccharide ABC transporter substrate-binding... 234 2e-60 UniRef50_D1QRT0 Putative DNA-binding response regulator/sensor h... 234 2e-60 UniRef50_A1WJI7 Periplasmic binding protein/LacI transcriptional... 234 3e-60 UniRef50_C9LWW5 Sugar ABC transporter, periplasmic sugar-binding... 234 4e-60 UniRef50_D1AIH6 Galactose-binding protein n=3 Tax=Bacteria RepID... 234 4e-60 UniRef50_B8I0K4 Periplasmic binding protein/LacI transcriptional... 234 4e-60 UniRef50_B1ZN56 Periplasmic binding protein/LacI transcriptional... 233 5e-60 UniRef50_C4G5I4 Putative uncharacterized protein n=1 Tax=Abiotro... 233 5e-60 UniRef50_C6PN56 Periplasmic binding protein/LacI transcriptional... 233 7e-60 UniRef50_A6X2R7 Periplasmic binding protein/LacI transcriptional... 233 7e-60 UniRef50_C4U114 Ribose-binding protein of ribose ABC transporter... 233 7e-60 UniRef50_D1BVH2 Xylose ABC transporter, substrate-binding protei... 233 8e-60 UniRef50_B8HJG2 Periplasmic binding protein/LacI transcriptional... 233 9e-60 UniRef50_B4CUB2 Periplasmic binding protein/LacI transcriptional... 233 9e-60 UniRef50_A8RPX4 Putative uncharacterized protein n=1 Tax=Clostri... 233 9e-60 UniRef50_C7Q046 Solute-binding protein n=4 Tax=Actinomycetales R... 233 1e-59 UniRef50_B0PA90 Putative uncharacterized protein n=1 Tax=Anaerot... 232 1e-59 UniRef50_D2S5J9 Periplasmic binding protein/LacI transcriptional... 232 2e-59 UniRef50_C6B4I0 Periplasmic binding protein/LacI transcriptional... 231 2e-59 UniRef50_C2KYA7 Possible periplasmic binding protein/LacI transc... 231 2e-59 UniRef50_D1AQM7 Periplasmic binding protein/LacI transcriptional... 231 2e-59 UniRef50_Q01TB6 Periplasmic binding protein/LacI transcriptional... 231 3e-59 UniRef50_C6VSM5 Sensor protein n=1 Tax=Dyadobacter fermentans DS... 231 3e-59 UniRef50_A5KKL8 Putative uncharacterized protein n=1 Tax=Ruminoc... 231 3e-59 UniRef50_A8RKK5 Putative uncharacterized protein n=1 Tax=Clostri... 231 3e-59 UniRef50_A6UE72 Monosaccharide-transporting ATPase n=13 Tax=Alph... 231 3e-59 UniRef50_Q896U1 D-ribose-binding periplasmic protein n=1 Tax=Clo... 231 4e-59 UniRef50_C3MI97 Putative solute-binding component of ABC transpo... 230 4e-59 UniRef50_D1C9K0 ABC-type xylose transport system periplasmic com... 230 4e-59 UniRef50_A9GMT2 Put. D-ribose-binding periplasmic protein n=2 Ta... 230 7e-59 UniRef50_P39265 D-allose-binding periplasmic protein n=33 Tax=Ba... 229 8e-59 UniRef50_A1SYD2 Bifunctional carbohydrate binding and transport ... 229 8e-59 UniRef50_C7MZ66 Monosaccharide-binding protein n=1 Tax=Saccharom... 229 8e-59 UniRef50_C0EY05 Putative uncharacterized protein n=1 Tax=Eubacte... 229 9e-59 UniRef50_UPI00016C56B8 bifunctional carbohydrate binding and tra... 229 1e-58 UniRef50_D2PNL9 Periplasmic binding protein/LacI transcriptional... 229 1e-58 UniRef50_A9B1C5 Solute-binding protein n=1 Tax=Herpetosiphon aur... 229 1e-58 UniRef50_C6PMK5 ABC transporter (Substrate-binding protein) n=6 ... 228 2e-58 UniRef50_B7CDT0 Putative uncharacterized protein n=1 Tax=Eubacte... 228 2e-58 UniRef50_A9AWB1 Periplasmic binding protein/LacI transcriptional... 228 2e-58 UniRef50_A6LC26 Sensor protein n=6 Tax=Bacteroidales RepID=A6LC2... 228 3e-58 UniRef50_B0P063 Putative uncharacterized protein n=1 Tax=Clostri... 228 3e-58 UniRef50_B2T1S7 Monosaccharide-transporting ATPase n=9 Tax=Bacte... 227 4e-58 UniRef50_B2JP41 Periplasmic binding protein/LacI transcriptional... 227 4e-58 UniRef50_A6M1U1 Periplasmic binding protein/LacI transcriptional... 227 5e-58 UniRef50_Q2YI92 Putative two-component system sensor histidine k... 227 6e-58 UniRef50_C5ERG9 Periplasmic binding protein/LacI transcriptional... 226 6e-58 UniRef50_B0G317 Putative uncharacterized protein n=5 Tax=Clostri... 226 6e-58 UniRef50_B8H8H8 Periplasmic binding protein/LacI transcriptional... 226 7e-58 UniRef50_B0URZ9 Monosaccharide-transporting ATPase n=2 Tax=Gamma... 226 9e-58 UniRef50_B0P6G6 Putative uncharacterized protein n=2 Tax=Bacteri... 226 9e-58 UniRef50_Q7NMF9 Periplasmic sugar binding protein of ABC transpo... 226 1e-57 UniRef50_B0URJ4 Monosaccharide-transporting ATPase n=6 Tax=Paste... 226 1e-57 UniRef50_C0B7M6 Putative uncharacterized protein n=1 Tax=Coproco... 226 1e-57 UniRef50_C0DAQ0 Putative uncharacterized protein n=1 Tax=Clostri... 225 1e-57 UniRef50_A9AX36 Monosaccharide-transporting ATPase n=1 Tax=Herpe... 225 2e-57 UniRef50_B9Z758 Periplasmic binding protein/LacI transcriptional... 225 2e-57 UniRef50_A6W806 Periplasmic binding protein/LacI transcriptional... 224 2e-57 UniRef50_B2IIE3 Periplasmic binding protein/LacI transcriptional... 224 2e-57 UniRef50_B8H228 Inositol ABC transporter, periplasmic inositol-b... 224 3e-57 UniRef50_C1XFK3 Monosaccharide ABC transporter substrate-binding... 224 3e-57 UniRef50_A6BDP6 Putative uncharacterized protein n=1 Tax=Dorea l... 224 3e-57 UniRef50_B9JQE2 D-ribose-binding periplasmic protein n=1 Tax=Agr... 224 3e-57 UniRef50_B5GEU2 Sugar uptake ABC transporter periplasmic solute-... 224 4e-57 UniRef50_B1Y299 Periplasmic binding protein/LacI transcriptional... 224 4e-57 UniRef50_Q883G4 Ribose ABC transporter, periplasmic ribose-bindi... 224 4e-57 UniRef50_Q1ASV8 Twin-arginine translocation pathway signal n=1 T... 224 4e-57 UniRef50_B8CWP1 Periplasmic binding protein/LacI transcriptional... 224 4e-57 UniRef50_A6BKA3 Putative uncharacterized protein n=6 Tax=Clostri... 224 4e-57 UniRef50_B0G492 Putative uncharacterized protein n=1 Tax=Dorea f... 224 5e-57 UniRef50_D1AKZ2 RbsB protein n=2 Tax=Bacteria RepID=D1AKZ2_SEBTE 223 5e-57 UniRef50_C4FY38 Putative uncharacterized protein n=1 Tax=Catonel... 223 7e-57 UniRef50_A6WVL9 Monosaccharide-transporting ATPase n=17 Tax=Prot... 223 7e-57 UniRef50_B0G4U9 Putative uncharacterized protein n=3 Tax=Clostri... 223 7e-57 UniRef50_B5GKD2 D-ribose ABC transporter permease protein n=1 Ta... 223 8e-57 UniRef50_C2L0R0 Ribose ABC superfamily ATP binding cassette tran... 223 8e-57 UniRef50_D2LSY2 Periplasmic binding protein/LacI transcriptional... 223 1e-56 UniRef50_C9XJ75 D-ribose ABC transporter, substrate-binding prot... 222 1e-56 UniRef50_A8RSF4 Putative uncharacterized protein n=1 Tax=Clostri... 222 1e-56 UniRef50_C3KM03 Ribose ABC transporter, ribose-binding protein n... 222 1e-56 UniRef50_A0R773 Sugar ABC transporter substrate-binding protein ... 222 2e-56 UniRef50_C1XS39 Monosaccharide ABC transporter substrate-binding... 221 2e-56 UniRef50_B2ILF2 Periplasmic binding protein/LacI transcriptional... 221 2e-56 UniRef50_A8SGU5 Putative uncharacterized protein n=1 Tax=Faecali... 221 2e-56 UniRef50_Q97J33 Ribose ABC transporter (Ribose-binding periplasm... 221 3e-56 UniRef50_C0VSF4 D-ribose ABC superfamily ATP binding cassette tr... 221 3e-56 UniRef50_D1BCK3 Multiple monosaccharide-binding protein n=1 Tax=... 221 3e-56 UniRef50_C5EU51 D-galactose-binding periplasmic protein n=4 Tax=... 221 3e-56 UniRef50_P44883 D-galactose-binding periplasmic protein n=246 Ta... 220 4e-56 UniRef50_A8I1T9 ABC transporter sugar-binding protein n=3 Tax=Pr... 220 5e-56 UniRef50_B9K719 Sugar ABC transporter, periplasmic sugar-binding... 220 5e-56 UniRef50_A6VWF2 Periplasmic binding protein/LacI transcriptional... 220 5e-56 UniRef50_C7QJZ0 Periplasmic binding protein/LacI transcriptional... 220 6e-56 UniRef50_A5KK65 Putative uncharacterized protein n=2 Tax=Clostri... 220 7e-56 UniRef50_A4TQ38 Sugar ABC transporter, periplasmic protein n=30 ... 219 8e-56 UniRef50_A8S343 Putative uncharacterized protein n=1 Tax=Clostri... 219 8e-56 UniRef50_C9LY79 Periplasmic ribose-binding protein n=1 Tax=Selen... 219 8e-56 UniRef50_P39325 ABC transporter periplasmic-binding protein ytfQ... 219 9e-56 UniRef50_A6VZZ1 Periplasmic binding protein/LacI transcriptional... 219 9e-56 UniRef50_C6LHP7 ABC transporter periplasmic-binding protein YtfQ... 219 1e-55 UniRef50_D2Q6W7 D-ribose-binding protein RbsB n=2 Tax=Bifidobact... 219 1e-55 UniRef50_A8RTB0 Putative uncharacterized protein n=1 Tax=Clostri... 219 1e-55 UniRef50_C6CXV0 D-galactose/D-glucose ABC transporter, periplasm... 219 1e-55 UniRef50_B1Y1T3 ABC sugar transporter, periplasmic solute-bindin... 219 1e-55 UniRef50_A5ZRB9 Putative uncharacterized protein n=1 Tax=Ruminoc... 218 2e-55 UniRef50_Q2NWM4 Putative xylose ABC transporter periplasmic comp... 218 2e-55 UniRef50_C0CKL2 Putative uncharacterized protein n=2 Tax=Blautia... 218 2e-55 UniRef50_Q08VN8 RbsB protein n=2 Tax=Proteobacteria RepID=Q08VN8... 218 2e-55 UniRef50_A6M1Q7 D-galactose-binding periplasmic protein n=4 Tax=... 218 2e-55 UniRef50_C4ZH94 ABC-type sugar transport system, periplasmic com... 218 3e-55 UniRef50_D2B5R3 Putative sugar ABC transporter, substrate-bindin... 217 4e-55 UniRef50_Q1ARR7 Periplasmic binding protein/LacI transcriptional... 217 4e-55 UniRef50_A9HN30 Periplasmic binding protein/LacI transcriptional... 217 5e-55 UniRef50_C5V3A4 Periplasmic binding protein/LacI transcriptional... 216 7e-55 UniRef50_Q0RYT8 ABC sugar transporter, periplasmic substrate bin... 216 7e-55 UniRef50_C8Q2Z4 Sugar ABC transporter, periplasmic sugar-binding... 216 7e-55 UniRef50_B4UZK6 D-allose-binding periplasmic protein n=2 Tax=Str... 216 8e-55 UniRef50_C9Y9X5 Putative uncharacterized protein n=1 Tax=Curviba... 216 1e-54 UniRef50_A0JVZ4 Periplasmic binding protein/LacI transcriptional... 216 1e-54 UniRef50_C2KUT6 Galactoside ABC superfamily ATP binding cassette... 216 1e-54 UniRef50_C9Z5F4 Putative lipoprotein n=2 Tax=Streptomyces RepID=... 216 1e-54 UniRef50_C0C307 Putative uncharacterized protein n=2 Tax=Clostri... 215 1e-54 UniRef50_C5EPY8 Ribose ABC transporter n=2 Tax=Clostridiales Rep... 215 1e-54 UniRef50_C7G6I7 D-galactose-binding periplasmic protein n=3 Tax=... 215 2e-54 Sequences not found previously or not previously below threshold: >UniRef50_C9Y333 D-xylose-binding periplasmic protein n=20 Tax=Proteobacteria RepID=C9Y333_CROTZ Length = 343 Score = 332 bits (853), Expect = 8e-90, Method: Composition-based stats. Identities = 291/330 (88%), Positives = 315/330 (95%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFV 60 MKIK ++LTLC SL+LT+ + AK+VKIGMAIDDLRLERWQKDRDIFV KAESLGAKVFV Sbjct: 14 MKIKQLILTLCASLVLTSFSGIAKDVKIGMAIDDLRLERWQKDRDIFVSKAESLGAKVFV 73 Query: 61 QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD 120 QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVV EAK+EGIKVLAYDRMIN+AD Sbjct: 74 QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVAEAKREGIKVLAYDRMINNAD 133 Query: 121 IDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGK 180 IDFYISFDNEKVGE+QA++LVD VPQGNYFLMGGSPVDNNA+LFR GQMKVLKP+VDSGK Sbjct: 134 IDFYISFDNEKVGEIQAQSLVDKVPQGNYFLMGGSPVDNNARLFRDGQMKVLKPFVDSGK 193 Query: 181 IKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVA 240 IKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGL+GKVA Sbjct: 194 IKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLAGKVA 253 Query: 241 ISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDV 300 ISGQDADLAGIKRI AGTQTMTVYKPIT LANTAAE+AVELGN ++PK+D TLNNGLK+V Sbjct: 254 ISGQDADLAGIKRIMAGTQTMTVYKPITQLANTAAEVAVELGNDKQPKSDATLNNGLKEV 313 Query: 301 PSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 PSRLLTPI V+K+NI+ TVIKDGFHK+S+L Sbjct: 314 PSRLLTPIKVDKSNIESTVIKDGFHKKSDL 343 >UniRef50_Q2RGX1 Periplasmic binding protein/LacI transcriptional regulator n=21 Tax=Bacteria RepID=Q2RGX1_MOOTA Length = 381 Score = 324 bits (831), Expect = 3e-87, Method: Composition-based stats. Identities = 205/312 (65%), Positives = 252/312 (80%) Query: 17 TNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIEN 76 A + ++KIG+++DDLR ERWQ DRD+FV KA+ LGA+V VQSANG++ TQ+SQ EN Sbjct: 40 GASAKNGDKIKIGLSMDDLRQERWQHDRDLFVAKAKELGAEVLVQSANGDDATQLSQAEN 99 Query: 77 MINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQ 136 +I++G++VLV+IP+NG ++ +V+ A + G+KVLAYDR+I +AD+D YISFDN +VGELQ Sbjct: 100 LISQGINVLVVIPHNGDAMAPIVEAAHKAGVKVLAYDRLIRNADVDLYISFDNVRVGELQ 159 Query: 137 AKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPEN 196 A+ L VP+G YFLMGGSP DNNAKLFR GQM VLKP +D G IKVVGDQWV WLPE Sbjct: 160 AEYLTKKVPKGKYFLMGGSPTDNNAKLFRQGQMNVLKPLIDKGDIKVVGDQWVKDWLPEE 219 Query: 197 ALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAA 256 A+KIMENALT+NNN+IDAVVASND+TAGGAIQAL+AQ L+GKVAISGQDADLA +RI Sbjct: 220 AMKIMENALTSNNNQIDAVVASNDSTAGGAIQALAAQNLAGKVAISGQDADLAACQRIVE 279 Query: 257 GTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIK 316 GTQ+MTVYKPIT LA AAE+AV L G+ A+ +NNG DVPS LLTPI V+K+N+ Sbjct: 280 GTQSMTVYKPITTLATRAAEVAVALAKGENIGANNKVNNGKIDVPSVLLTPIMVDKDNMV 339 Query: 317 DTVIKDGFHKES 328 TVIKDGFHK Sbjct: 340 QTVIKDGFHKLE 351 >UniRef50_P45047 D-xylose-binding periplasmic protein n=193 Tax=Bacteria RepID=XYLF_HAEIN Length = 332 Score = 317 bits (812), Expect = 5e-85, Method: Composition-based stats. Identities = 247/330 (74%), Positives = 290/330 (87%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFV 60 MKIK+ LLTL +L + + +AH+K++KIG++IDDLRLERWQKDRDIFV KAES+GAKVFV Sbjct: 1 MKIKSALLTLVGALTVFSSSAHSKDLKIGLSIDDLRLERWQKDRDIFVNKAESMGAKVFV 60 Query: 61 QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD 120 QSANG++ Q+SQIENMIN+ +DVLVIIP+NG+VLSNV+ EAK+EGIKVLAYDR+IN+AD Sbjct: 61 QSANGDDSAQISQIENMINKNIDVLVIIPHNGEVLSNVISEAKKEGIKVLAYDRLINNAD 120 Query: 121 IDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGK 180 +DFY+SFDNEKVGELQAK++V + P+GNYFLMGGSPVDNNAKLFR GQMKVL P + SGK Sbjct: 121 LDFYVSFDNEKVGELQAKSIVAVKPEGNYFLMGGSPVDNNAKLFRKGQMKVLDPLIASGK 180 Query: 181 IKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVA 240 IKVVGDQWVD WL E AL+IMENALTAN N +DAVVASNDATAGGAIQALSAQGLSGKVA Sbjct: 181 IKVVGDQWVDSWLAEKALQIMENALTANKNNVDAVVASNDATAGGAIQALSAQGLSGKVA 240 Query: 241 ISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDV 300 ISGQDADLA IKRI G+QTMTVYKPIT LA+ AAEIAVELG ++ +A+ LNNGLK+V Sbjct: 241 ISGQDADLAAIKRIVNGSQTMTVYKPITKLADKAAEIAVELGKNEKIEANAELNNGLKNV 300 Query: 301 PSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 P+ LL PI V+K NI +TVIKDGFH + + Sbjct: 301 PAYLLDPIAVDKRNINETVIKDGFHTKESI 330 >UniRef50_A6TRZ6 Monosaccharide-transporting ATPase n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TRZ6_ALKMQ Length = 353 Score = 302 bits (775), Expect = 9e-81, Method: Composition-based stats. Identities = 141/352 (40%), Positives = 230/352 (65%), Gaps = 22/352 (6%) Query: 1 MKIKNILLTLCTSLL----LTNVAAH-----------------AKEVKIGMAIDDLRLER 39 MK K IL L ++ L ++++G+++ R ER Sbjct: 1 MKSKKILSFLLMMVMVVTLLAGCGGQQETAEETAGEETVVEEPEAKIRVGLSLPTQREER 60 Query: 40 WQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVV 99 W +D++ A +G ++ V+ ++ N + Q++Q+E ++N+G+DVL++ P++ +++V Sbjct: 61 WVRDKERMEAYAAEVGIELIVRVSDANIQEQITQVEALLNQGIDVLILAPHDASAAASLV 120 Query: 100 KEAKQEGIKVLAYDRMI-NDADIDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVD 158 ++A +EG+ V++YDR+I N +D Y+SFDN KVGELQ K + + VP+G Y +M G+P D Sbjct: 121 EQANREGVPVISYDRLITNTDKLDIYLSFDNVKVGELQGKYITEQVPEGRYIIMSGAPTD 180 Query: 159 NNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVAS 218 NNA LF+ G M ++P +D+GKI+V+ +Q VD W+PENAL+I+E AL+AN+N++DA++A Sbjct: 181 NNATLFKQGAMSYIQPLIDAGKIEVIAEQAVDNWVPENALRIVEAALSANDNQVDAILAP 240 Query: 219 NDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIA 278 ND TAG AIQAL+AQGL+G+V I+GQDA+++ KRI GTQ+MT++K LL A IA Sbjct: 241 NDGTAGAAIQALTAQGLAGQVPITGQDAEVSAAKRIVDGTQSMTIFKDTRLLGEEAINIA 300 Query: 279 VELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 ++L NG+ + ++NG +VPS LL P V +NI++ ++ G+ E++L Sbjct: 301 IKLANGESISTNGEVDNGRFNVPSVLLEPQVVTADNIRELLVGGGYITEADL 352 >UniRef50_B5JEL4 Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JEL4_9BACT Length = 359 Score = 298 bits (765), Expect = 2e-79, Method: Composition-based stats. Identities = 153/329 (46%), Positives = 222/329 (67%), Gaps = 3/329 (0%) Query: 5 NILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSAN 64 I + + S T+ ++ ++ IG+++D L+ RWQ DRD+F+ +A+ LGA+V V SAN Sbjct: 18 LIGIVISRSHTGTDSSSPDHKLLIGLSMDTLQEARWQVDRDVFLARAKELGAEVSVASAN 77 Query: 65 GNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFY 124 ++ TQ+ + +MI+ GVDV+VIIP++GQ +S V++A Q GI V+AYDR I D+D+D Y Sbjct: 78 SDDSTQIRDVNSMISAGVDVIVIIPHDGQAMSEGVRQAHQAGIPVIAYDRSIQDSDLDLY 137 Query: 125 ISFDNEKVGELQAKALVDIV---PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKI 181 I+FDN KVGE QA+ L+D + +G + G+P DNNAK+F+ GQ +L+PY+D G I Sbjct: 138 ITFDNVKVGEAQAQYLIDHLPSPGKGRIVRIYGAPTDNNAKMFKQGQDNILQPYIDRGDI 197 Query: 182 KVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAI 241 +V+ + W + W P NA KI A+T N + ++ASND TAGGAIQAL +GL K+ + Sbjct: 198 EVIHEDWAENWEPANAKKITNAAITNNGSDFHGILASNDGTAGGAIQALKEEGLVSKIIV 257 Query: 242 SGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVP 301 +GQDA++A +RI G+Q MT+YKPI LA+TAAE+AV + GQ A ++NG K VP Sbjct: 258 TGQDAEMAACQRIVDGSQIMTIYKPIKALASTAAELAVSMATGQPIIARGEIDNGFKTVP 317 Query: 302 SRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 S L V+K+N+ TVI DGFH E+ Sbjct: 318 SIFLPITSVDKSNMMQTVIADGFHSFEEV 346 >UniRef50_C7REM6 Periplasmic binding protein/LacI transcriptional regulator n=5 Tax=Firmicutes RepID=C7REM6_ANAPD Length = 316 Score = 298 bits (763), Expect = 2e-79, Method: Composition-based stats. Identities = 67/312 (21%), Positives = 136/312 (43%), Gaps = 32/312 (10%) Query: 3 IKNILLTLCTSLLLTNVA----------------------AHAKEVKIGMAIDDLRLERW 40 + + + L ++T + ++KIG+++ L + Sbjct: 5 RRLLSVLLLAIFMITGCSIEGQNNKEESKESGVEEKASETKTDGDMKIGVSLSTLNNPFF 64 Query: 41 QKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVK 100 R+ + A + + A + TQ +Q+E++I +GVD++VI P + ++ V+ Sbjct: 65 VSIREGVEEAAGKENVETVITDAQNDSSTQNNQVEDLITQGVDLIVINPVDSTAIATSVE 124 Query: 101 EAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVPQ-GNYFLMGGSPVDN 159 +A + I V+ DR + ++ +I+ +N + G+L + +++ V + + G P + Sbjct: 125 KANEANIPVICVDRGSDQGELVSFIASNNVEGGKLAGEYILEKVGENAEVIQLEGIPGAS 184 Query: 160 NAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASN 219 + + G + +GKI ++ Q + + +MEN L A+ + + AV N Sbjct: 185 STRERGEGFEEA-----TNGKINLLASQTA-NFDRAEGMTVMENLLQAHPD-VKAVFCQN 237 Query: 220 DATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAV 279 D A GA +A+ A G V I G D + IK + G + TV + + A E A+ Sbjct: 238 DEMALGASEAIKASGKD--VTIVGFDGNEDAIKAVEEGNLSATVAQKPKEMGKLAIETAI 295 Query: 280 ELGNGQEPKADT 291 + G+E + Sbjct: 296 KYLKGEEVEETV 307 >UniRef50_C6J071 ABC-type ribose transport system n=7 Tax=Bacteria RepID=C6J071_9BACL Length = 429 Score = 297 bits (761), Expect = 4e-79, Method: Composition-based stats. Identities = 175/315 (55%), Positives = 235/315 (74%), Gaps = 1/315 (0%) Query: 16 LTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIE 75 ++ IGM++D L+ ERWQKDRD+F K E LG +V V +ANG++ TQ+SQ E Sbjct: 105 SAAGGKDDGKIVIGMSMDTLKEERWQKDRDLFTAKVEELGGEVKVLAANGDDATQLSQAE 164 Query: 76 NMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGEL 135 +I++GVDVLV+I +N + + +V++A +EGIKV+AYDR+I ++D+D+YISFDN +VGEL Sbjct: 165 QLISQGVDVLVVIAHNAEATAPIVEKAHKEGIKVIAYDRLIRNSDVDYYISFDNVRVGEL 224 Query: 136 QAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPE 195 QA+A+++ P+GN +GG+ DNNA +F+ G M VLKP + G IK+V DQ+ W PE Sbjct: 225 QARAVIEAAPKGNIVYIGGADTDNNAHMFKEGAMNVLKPLEEKGDIKIVYDQFSKDWKPE 284 Query: 196 NALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIA 255 ALK MENALTANNN I VVA+ND TAGG IQAL+AQG++GK+ +SGQDADLA ++RIA Sbjct: 285 EALKNMENALTANNNDIQGVVAANDGTAGGVIQALNAQGMAGKIPVSGQDADLAAVQRIA 344 Query: 256 AGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNI 315 GTQ MTVYKPI +A TAAE+AV G+E KAD T+NNG DVPS LL PI +NK+++ Sbjct: 345 EGTQLMTVYKPIKSIAITAAEMAVAAAKGEEVKADKTVNNGKIDVPSVLLDPIPLNKDSL 404 Query: 316 KDTVIKDGFHKESEL 330 VI+DGFHK ++ Sbjct: 405 N-VVIEDGFHKLEDV 418 >UniRef50_Q65E53 RbsB n=6 Tax=Firmicutes RepID=Q65E53_BACLD Length = 304 Score = 290 bits (742), Expect = 6e-77, Method: Composition-based stats. Identities = 76/306 (24%), Positives = 142/306 (46%), Gaps = 21/306 (6%) Query: 1 MKIKNILLTLCTSLLLTNVA-----------AHAKEVKIGMAIDDLRLERWQKDRDIFVK 49 MK + T L L+ + ++KIG+++ L+ + ++ VK Sbjct: 1 MKKTLTVFTALALLFLSACSLEPPEWAKPNKEKGTDIKIGLSVSTLKNPFFVSLKNGVVK 60 Query: 50 KAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKV 109 +A+ G +V V A + Q + +E+++ +GVD L+I P + +S V+ A GI V Sbjct: 61 EAKKQGIEVIVVDAQDDSAKQTNDVEDLLQQGVDALLINPADSSAISTAVQSANSLGIPV 120 Query: 110 LAYDRMINDADIDFYISFDNEKVGELQAKALVDIVPQG-NYFLMGGSPVDNNAKLFRAGQ 168 + DR + ++ ++ DN K G++ A +V+ + +G + G P + + +G Sbjct: 121 VTLDRSAENGKVETLVASDNVKGGQMAADFIVEQLGKGAKVAELEGVPGASATRERGSGF 180 Query: 169 MKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQ 228 K K+ V+ Q D + L +MEN L N + I AV A ND A GAI+ Sbjct: 181 HKTADD-----KLNVIAKQTAD-FDRTKGLNVMENLLQGNPD-IQAVFAHNDEMALGAIE 233 Query: 229 ALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPK 288 A+ + G ++ + G D + +K + AG + T+ + L+ A + A ++ NG++ + Sbjct: 234 AIRSSGK--EILVVGFDGNEDAVKAVQAGDMSATIAQQPELIGKLAVQAARDILNGKKVE 291 Query: 289 ADTTLN 294 Sbjct: 292 KTIPAP 297 >UniRef50_C8WRM5 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WRM5_ALIAD Length = 321 Score = 288 bits (739), Expect = 1e-76, Method: Composition-based stats. Identities = 68/311 (21%), Positives = 133/311 (42%), Gaps = 26/311 (8%) Query: 1 MKIKNILLTL--CTSLLLTNVA-----------------AHAKEVKIGMAIDDLRLERWQ 41 MK +L + + +L A K +K+G A+ L + Sbjct: 1 MKRWTAMLAVGVVAAGVLAGCGTSVSTGSQKTNLSNTGTASTKPIKLGFAVSTLNNPFFV 60 Query: 42 KDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKE 101 + ++A+ LG +V + + N + TQ++Q+E++I + V+ +++ P + Q LS V++ Sbjct: 61 AMSNGVQEEAKKLGVQVTILNGNNDPATQLNQVEDLIQQHVNAIILNPTDSQSLSTAVEQ 120 Query: 102 AKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNN 160 A + I V+ DR + ++ +I+ ++ + G++ A L+ + +G + G + Sbjct: 121 ANRAHIPVITLDRSVTKGNVACFIASNSVEAGKMAADELIKALGGKGQVVELQGVIGTSA 180 Query: 161 AKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASND 220 G + + I+VV Q + AL +M+N L A+ N I V A ND Sbjct: 181 EADREKGFDEEIGKAP---GIRVVARQTA-NFDRSQALNVMQNILQAHPN-IQGVFAQND 235 Query: 221 ATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVE 280 A GA++A+ G + I G D + + + G + + E AV+ Sbjct: 236 EMALGALKAIQEAGKHN-IKIVGIDGEKEAVNDVHKGLLYADIAQQPVQEGILGVEYAVK 294 Query: 281 LGNGQEPKADT 291 L G++ Sbjct: 295 LVEGEKVPKQV 305 >UniRef50_P36949 D-ribose-binding protein n=274 Tax=Bacteria RepID=RBSB_BACSU Length = 305 Score = 288 bits (737), Expect = 2e-76, Method: Composition-based stats. Identities = 75/307 (24%), Positives = 137/307 (44%), Gaps = 22/307 (7%) Query: 1 MKIKNILLTLCTSLLLTNVA------------AHAKEVKIGMAIDDLRLERWQKDRDIFV 48 MK ++ + LLT + + KE IG+++ L + + Sbjct: 1 MKKAVSVILTLSLFLLTACSLEPPQWAKPSNSGNKKEFTIGLSVSTLNNPFFVSLKKGIE 60 Query: 49 KKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIK 108 K+A+ G KV + A + Q S +E++I +GVD L+I P + +S V+ A G+ Sbjct: 61 KEAKKRGMKVIIVDAQNDSSKQTSDVEDLIQQGVDALLINPTDSSAISTAVESANAVGVP 120 Query: 109 VLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVPQG-NYFLMGGSPVDNNAKLFRAG 167 V+ DR ++ ++ DN K GE+ A + D + +G + G P + + +G Sbjct: 121 VVTIDRSAEQGKVETLVASDNVKGGEMAAAFIADKLGKGAKVAELEGVPGASATRERGSG 180 Query: 168 QMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAI 227 + K++VV Q D + L +MEN L + + I AV A ND A GA+ Sbjct: 181 FHNIADQ-----KLQVVTKQSAD-FDRTKGLTVMENLLQGHPD-IQAVFAHNDEMALGAL 233 Query: 228 QALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEP 287 +A+++ G + + G D + + I + TV + L+ A E A ++ +G++ Sbjct: 234 EAINSSGKD--ILVIGFDGNKDALASIKDRKLSATVAQQPELIGKLATEAADDILHGKKV 291 Query: 288 KADTTLN 294 + + Sbjct: 292 QKTISAP 298 >UniRef50_C6QL47 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Geobacillus RepID=C6QL47_9BACI Length = 340 Score = 281 bits (719), Expect = 3e-74, Method: Composition-based stats. Identities = 77/320 (24%), Positives = 142/320 (44%), Gaps = 22/320 (6%) Query: 7 LLTLCTSLLLTNVAAHAK--EVKIGMAIDDLRLERWQKDRDIFVKKAE-SLGAKVFVQSA 63 +L C+ T + K ++ IG A+ D + +D + + +V A Sbjct: 36 MLVGCSGKQETAQTSGDKSGKIVIGAALPDFDDKWLSYLQDGMKEYEKTQKDVEVIYVDA 95 Query: 64 NGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD-ID 122 + Q+SQ+EN I + VD +V+IP + +V +A Q I ++ +R+ + D Sbjct: 96 MNDASKQLSQVENFIQQKVDAIVLIPVDTVSAPEMVDKANQANIPIVVVNRIFDGVDKAT 155 Query: 123 FYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKI 181 Y+ ++ K G +Q + + ++ +G +M G G +V+K Y D + Sbjct: 156 AYVGSESIKAGIMQMEEVAKLLNGKGKIAIMNGQMGHEAQIKRTEGNKQVIKKYPD---M 212 Query: 182 KVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAI 241 KVV + + W + +MEN L + KIDAVV +ND A GAI AL +G V + Sbjct: 213 KVVLEGTAE-WDRAKGMSLMENWLQS-GKKIDAVVCNNDEMAIGAIMALEDEGKLDDVIV 270 Query: 242 SGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVP 301 +G DA ++ + G +TV++ E+A++ G++ + Sbjct: 271 AGVDATPDALEYVKEGKLKVTVFQNAKGQGQLGLEVAIKAAKGEKVEKFNW--------- 321 Query: 302 SRLLTPIDVNKNNIKDTVIK 321 + V K+N+++ + K Sbjct: 322 ---IPYELVTKDNVEEYIKK 338 >UniRef50_B8I3W5 Periplasmic sugar-binding protein n=2 Tax=Clostridium RepID=B8I3W5_CLOCE Length = 352 Score = 280 bits (717), Expect = 5e-74, Method: Composition-based stats. Identities = 128/334 (38%), Positives = 214/334 (64%), Gaps = 6/334 (1%) Query: 2 KIKNILLTLCTSLLLTNVA-----AHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGA 56 KI +L +L T +LL + ++ IG+++ L+ ERW +D + KA++ GA Sbjct: 7 KIFLLLASLITMVLLAGCSYKNPIDKPDKITIGLSMATLQEERWHRDIEALRAKAQAKGA 66 Query: 57 KVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI 116 ++ ++AN N Q+SQ+++++++ +D+LVI+P + + V+ A+ +GI+V+ YDR+I Sbjct: 67 EILFRNANNNINDQISQVKSLLSKDIDILVIVPQDAEKSQQAVQLARNKGIRVICYDRLI 126 Query: 117 NDADIDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYV 176 +++ DFY+SFDN +VGE A +V VP+GNY L+ G+ D N+ ++ G +L Y+ Sbjct: 127 KNSNTDFYVSFDNIRVGEYMASLMVSKVPKGNYILINGAKTDYNSFMYNKGFKNILGKYL 186 Query: 177 DSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS 236 G IK+V + W + W PE+A K ++ AL + KIDA++A+ND+ AG AI+ALS + L+ Sbjct: 187 YEGSIKIVDEVWANDWKPEDAFKCVDKAL-RDGKKIDAIIAANDSLAGAAIKALSQRRLA 245 Query: 237 GKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNG 296 GKV ++G DAD++G +R+A GTQ +TVYKPI LA A ++ + L N + +N+G Sbjct: 246 GKVPVAGHDADISGCQRVAEGTQLLTVYKPIDQLAEKAIDVVLGLLNNDYYACNKFINDG 305 Query: 297 LKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 D+P ++ P+ V K+ + DTVI GFHK ++ Sbjct: 306 ESDIPYEMVEPVVVTKDTLVDTVISAGFHKLEDV 339 >UniRef50_B9MLQ1 Monosaccharide-transporting ATPase n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MLQ1_ANATD Length = 362 Score = 280 bits (716), Expect = 6e-74, Method: Composition-based stats. Identities = 133/309 (43%), Positives = 198/309 (64%), Gaps = 1/309 (0%) Query: 22 HAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRG 81 +V+IG A+ L+ ERW KDRDI + KA G +V +AN N+ Q++Q++ ++++ Sbjct: 51 KPSKVRIGFAMGTLKEERWFKDRDILIAKAHEKGYEVEWVNANENDVEQINQVKYLLSKN 110 Query: 82 VDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALV 141 +++L+I+P N + S+ V AK++GIKV++YDR++ ++DID Y+SF+N KVGEL AK L+ Sbjct: 111 INILIIVPNNYEKCSSAVNLAKKKGIKVISYDRLVKNSDIDVYVSFNNYKVGELMAKWLL 170 Query: 142 DIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIM 201 VP GNY + G P D N ++ + G KVL + +I + +++ W E A + Sbjct: 171 KKVPYGNYVFLLGDPGDYNVQMIKEGYHKVLDSLIQKKQINSLLEKYCYNWRKEYAYNYV 230 Query: 202 ENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTM 261 N L +IDAV+ASND+ A GAI ALS + L+G V ++GQDAD++ +RI GTQ M Sbjct: 231 NNLLEE-GKRIDAVLASNDSLAEGAIMALSEKRLAGSVPVTGQDADISACQRIVKGTQLM 289 Query: 262 TVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTVIK 321 TVYKPI L + +I L G+ K + T+NNG K+VP+ + PI V+K NI DTVIK Sbjct: 290 TVYKPIDKLVDLTLDIVDRLIKGKLLKPNYTINNGYKNVPTFFIDPIGVDKTNINDTVIK 349 Query: 322 DGFHKESEL 330 D FH E+ Sbjct: 350 DNFHTWDEV 358 >UniRef50_D2QJX6 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QJX6_9SPHI Length = 317 Score = 279 bits (715), Expect = 8e-74, Method: Composition-based stats. Identities = 71/329 (21%), Positives = 136/329 (41%), Gaps = 28/329 (8%) Query: 3 IKNILLTLCTSLLLTNVA----------AHAKEVKIGMAIDDLRLERWQKDRDIFVKKAE 52 + I TL LLL + K++ +G + ++ E D K+A+ Sbjct: 6 LTPITTTLSIFLLLASCNQSGTSETSQDGEGKKLVVGATMLSMQNEFIVNVHDEMDKEAQ 65 Query: 53 SLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAY 112 G ++ A + Q+ Q+E+ I + VD +++ P + S V +A I ++ Sbjct: 66 KAGIELITVDAERSALKQVEQVESFIAQKVDAIIMNPCEVEASSPAVAKALAAKIPIINV 125 Query: 113 DRMINDADIDFYISFDNEKVGELQAKALVDIVP-QGNYFLMGGSPVDNNAKLFRAGQMKV 171 + + ++ D+ + + K + D + +GN +M G G ++ Sbjct: 126 NSETSSKP-SAFVGSDDVESARIAMKFIADKLGGKGNVVMMHGYMGQAAQIKREQGAREI 184 Query: 172 LKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALS 231 LK Y + +K++ Q W A+ +MEN + + ++I+AV A ND GA++AL+ Sbjct: 185 LKQYPN---LKLLAHQ-TGEWDRAKAMSLMENWIQSYGSQINAVFAHNDEMGLGAVKALT 240 Query: 232 AQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADT 291 GL KV + DA ++ + G+ TV++ A A++ GQ +T Sbjct: 241 DAGLKDKVIVVSIDAIPDALQAVKKGSLDATVFQNAEQQGAKAIATAIKAAKGQPFDKET 300 Query: 292 TLNNGLKDVPSRLLTPIDVNKNNIKDTVI 320 L+ V K+N+ + Sbjct: 301 ------------LVPFQLVTKDNLSKFLK 317 >UniRef50_A8S312 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S312_9CLOT Length = 346 Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats. Identities = 71/308 (23%), Positives = 136/308 (44%), Gaps = 18/308 (5%) Query: 16 LTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIE 75 + K+ IG+A++ + +D K A+ G ++++ A + QM +E Sbjct: 56 AGSEEGSGKKYVIGLAMNTQTNPFFVDVKDGVQKAADEHGIELYITDAQDDPTIQMKDVE 115 Query: 76 NMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGEL 135 N+I + D ++I + + + ++ + GI V DR N ++ +I +D K G + Sbjct: 116 NLITKKPDAIIIDTCDSDAIVSSIEACNEAGIPVFTMDREANGGEVISHIGYDAIKSGRM 175 Query: 136 QAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLP 194 + LVD + +G + G N A+ G +V+K D+ +++V Q D + Sbjct: 176 AGQYLVDTLGGKGKIVEIQGIMGTNVAQNRSQGFNEVMK---DNPDMEIVACQVAD-FDR 231 Query: 195 ENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRI 254 + +MEN L AN +ID + A+ND GA++A+ A G + ++ G DA + + Sbjct: 232 AKGMSVMENILQANP-EIDGLYAANDEMLLGALEAMEAAGRTDEIVKIGCDAIDDTLDAM 290 Query: 255 AAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNN 314 AG T+ +P L A + G++ + P +L V ++ Sbjct: 291 KAGKVDATIAEPPFFLGKAILNTAYDYLEGKQVE------------PYVILDNQLVTQDT 338 Query: 315 IKDTVIKD 322 + V K+ Sbjct: 339 VDSLVTKE 346 >UniRef50_C1D8A9 RbsB n=14 Tax=Bacteria RepID=C1D8A9_LARHH Length = 309 Score = 278 bits (713), Expect = 1e-73, Method: Composition-based stats. Identities = 77/307 (25%), Positives = 136/307 (44%), Gaps = 20/307 (6%) Query: 2 KIKNILLTLCTSLLLTNVAAHA-------------KEVKIGMAIDDLRLERWQKDRDIFV 48 K+ L+ + + + IG+A+ + + Sbjct: 3 KLMKSLMAGALVFAVAACSKQGPETAQAPDAGTDGGKPAIGLAVSTQSNPFFVTLKKGAE 62 Query: 49 KKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIK 108 ++A+ G + A + Q++ IE++I + V V+++ P + + VK A GI Sbjct: 63 EEAQKQGLTLITVDAQDDPAKQIASIEDLIQKKVKVILVNPTDSDAVVGAVKAANAAGIP 122 Query: 109 VLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVP-QGNYFLMGGSPVDNNAKLFRAG 167 V+ DR +N ++ +++ DN G++ A+ L++ + QG+ + G P + A+ G Sbjct: 123 VVTLDRSVNGGEVASHVASDNVAGGKMAAEYLLEKIGNQGDVVELEGIPGASAARERGQG 182 Query: 168 QMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAI 227 V+ D +KVVG Q D + L +MEN L AN N + V A ND A GA+ Sbjct: 183 FHDVIDQAKD---VKVVGRQPAD-FDRAKGLSVMENILQANKN-VKGVFAHNDEMALGAV 237 Query: 228 QALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEP 287 QAL A G+ V + G DA + + AG + TV + L+ TA + A ++ +GQ Sbjct: 238 QALEAAGMKD-VTVVGFDATDDAVNAVKAGKMSATVAQKPKLIGKTAVDAAKKIIDGQPV 296 Query: 288 KADTTLN 294 + Sbjct: 297 DKSLPVP 303 >UniRef50_C0C295 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C295_9CLOT Length = 330 Score = 278 bits (711), Expect = 2e-73, Method: Composition-based stats. Identities = 83/302 (27%), Positives = 143/302 (47%), Gaps = 16/302 (5%) Query: 19 VAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMI 78 + IG + + E + KKAE LG + + A + + Q++QIEN+I Sbjct: 38 ASKKDGGYTIGCTVYYMT-EFVTLMTEGMEKKAEELGCDLVMLDAQQDAQNQITQIENLI 96 Query: 79 NRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAK 138 + VDV+++ + + ++ GI ++ + + N + Y+ D+ GEL+ + Sbjct: 97 AQKVDVIIVAAVDSDAILPAIEMCDDAGIPLVGVNMLFNTEEPYHYVGPDDVLAGELEMQ 156 Query: 139 -ALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENA 197 A+ +I +GN ++ G + G +L Y GKI V+ DQ W E A Sbjct: 157 NAIDEIGGEGNVVILEGPIGQSAQIQRLEGNQNILDKY--EGKINVLADQTA-NWSREEA 213 Query: 198 LKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAG 257 L ++EN L + KIDA+VA ND A GAIQAL A GL+ K+ ++G DA L G + G Sbjct: 214 LTLVENWLETFSGKIDAIVAHNDEMALGAIQALEAAGLTDKIVVTGVDAILDGCNAVKDG 273 Query: 258 TQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKD 317 T TVY+ L + A + A ++ G+ + + + + + K+N+ + Sbjct: 274 TLLGTVYQDAGLEGSEAVQKAYDVLEGKVTEKELSY-----------IDMKWITKDNVDE 322 Query: 318 TV 319 + Sbjct: 323 LL 324 >UniRef50_Q03CA2 ABC-type sugar transport system, periplasmic component n=14 Tax=Lactobacillus RepID=Q03CA2_LACC3 Length = 319 Score = 277 bits (710), Expect = 4e-73, Method: Composition-based stats. Identities = 77/305 (25%), Positives = 132/305 (43%), Gaps = 18/305 (5%) Query: 5 NILLTLCTSLLLTN--------VAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGA 56 LT C L++ K++K+G+++ L + R+ A+ Sbjct: 19 LFTLTACGGTGLSSKSDSNTKVTKKAPKDLKVGVSLSTLSNPFFVSVRNGIQDLAKKNKT 78 Query: 57 KVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI 116 V V A + Q S IE++I + VDVL+I P + ++ VK+A GI V+ DR Sbjct: 79 NVQVSDAQNDTAKQNSNIEDLIQKKVDVLIINPVDSSAITPAVKDANDAGIPVITVDRSS 138 Query: 117 NDADIDFYISFDNEKVGELQAKALVDIVPQ-GNYFLMGGSPVDNNAKLFRAGQMKVLKPY 175 + + ++ ++ K G++ AK +++ + + + G P + + G K Sbjct: 139 DGGKVLTLVASNSTKGGQMAAKYMIEKLGKDAKIAELQGIPGASATRERGKGFDGAAK-- 196 Query: 176 VDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGL 235 GK+ +V Q G+ L + EN L N + I + + ND A GA+QA+ A G Sbjct: 197 ---GKLDIVSKQTA-GFDRAKGLTVTENILQGNGD-IVGIFSQNDEMALGAVQAVKAAGK 251 Query: 236 SGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNN 295 K+ I G D + GIK + AG TV + + A + A + NG+ K + Sbjct: 252 --KITIVGFDGEADGIKAVKAGDMAATVAQKPEEMGRLALQAAYDHFNGKTVKKNVESPL 309 Query: 296 GLKDV 300 L Sbjct: 310 SLVTT 314 >UniRef50_B0K235 Monosaccharide-transporting ATPase n=9 Tax=Clostridia RepID=B0K235_THEPX Length = 360 Score = 276 bits (708), Expect = 5e-73, Method: Composition-based stats. Identities = 141/310 (45%), Positives = 205/310 (66%), Gaps = 1/310 (0%) Query: 21 AHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINR 80 ++KIG ++ L+ ERW KDRDI + K LGA+V VQ+AN +++ Q+ Q+ ++++ Sbjct: 46 KKGHKIKIGFSLGTLKEERWIKDRDIVMAKLRELGAEVLVQNANNDDQDQLKQVRYLLDQ 105 Query: 81 GVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKAL 140 +DVL+I+P + + S V A++EG+KV++YDR++ +++D YISFDN KVG+L A+ L Sbjct: 106 KIDVLIIVPNDLEKASYAVSLAQKEGVKVISYDRLVTKSNVDLYISFDNVKVGKLMAEYL 165 Query: 141 VDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKI 200 V VP+GNY ++ G+ DNN K+ + G VLKP ++SG IK+V + W W+ E A Sbjct: 166 VKRVPRGNYLIINGATTDNNTKMIKEGYDSVLKPKIESGDIKIVKEDWAPNWMTEYAFNS 225 Query: 201 MENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQT 260 + L KIDAV+A +DA AGG I+ALS L+GKV ++ QDADLA +RI GTQ Sbjct: 226 TDELLQK-GAKIDAVIAGDDALAGGIIEALSEHRLAGKVLVAAQDADLAACQRIVEGTQA 284 Query: 261 MTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTVI 320 MTVYKPI LA A++A++L G++ T+ +G VP +L PI V+K NI DTVI Sbjct: 285 MTVYKPIDKLAEATAKMAMKLARGEKLDIKNTIYDGKYYVPYYVLEPIAVDKTNIDDTVI 344 Query: 321 KDGFHKESEL 330 KDGFH E+ Sbjct: 345 KDGFHNRDEV 354 >UniRef50_C8WRB6 Xylose binding protein transport system n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WRB6_ALIAD Length = 370 Score = 276 bits (707), Expect = 7e-73, Method: Composition-based stats. Identities = 132/330 (40%), Positives = 194/330 (58%), Gaps = 10/330 (3%) Query: 10 LCTSLLLTNVAAHAKEVKIGMAID-DLRLERWQKD-RDIFVKKAESL--GAKVFVQSANG 65 TS + VKI + RW+ D R F+ + L A++ +A G Sbjct: 35 GSTSTGAASAVNPHPSVKIAFLMPETNTSPRWEYDDRPDFIAAMKKLDPNAQIIYANAQG 94 Query: 66 NEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYI 125 +E TQ+ Q+E+ I G +LV+ P NG + +V EA + + V++YDR+I +A +D+Y+ Sbjct: 95 SEATQLQQVESAITEGAKLLVVAPVNGFAATTIVTEAAKAHVPVISYDRLIQNAKVDYYV 154 Query: 126 SFDNEKVGELQAKALVDIVPQGN-YFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVV 184 SF+N +VG+LQ + + +G ++ G+P D NAK F G VL P SGK+K+ Sbjct: 155 SFNNVEVGKLQGEYIAQHTKKGGTVVMLDGAPTDPNAKQFAQGAHDVLDPLFKSGKLKLG 214 Query: 185 GDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQ 244 +Q+ W + AL M+ ALT +N +DAV+A+ND AG AIQAL Q + G + ++GQ Sbjct: 215 YEQFTPNWDSQQALTEMQQALTRLHNHVDAVLAANDNLAGAAIQALEQQHIKG-IPVTGQ 273 Query: 245 DADLAGIKRI-AAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKA---DTTLNNGLKDV 300 DA AG+ RI GTQ+MTVYKPI AN AA++A +L G++P A + T+NNG +V Sbjct: 274 DATDAGLHRIYYEGTQSMTVYKPIKEEANAAAQLAYDLITGKKPPASLVNGTVNNGATNV 333 Query: 301 PSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 PS LL PI V K+N+ TVIKDGF + + Sbjct: 334 PSVLLQPIVVTKSNVASTVIKDGFTTWARI 363 >UniRef50_Q98LI2 Periplasmic ribose-binding protein n=2 Tax=Proteobacteria RepID=Q98LI2_RHILO Length = 315 Score = 273 bits (700), Expect = 4e-72, Method: Composition-based stats. Identities = 81/324 (25%), Positives = 135/324 (41%), Gaps = 23/324 (7%) Query: 2 KIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESL--GAKVF 59 + + TL ++ ++KIG + + + K A + Sbjct: 9 RTTALAATLVLGAMMPGAVLAQDKIKIGFSQGTMNHPWRVAMVEGNKKYAAEHYPDVDLI 68 Query: 60 VQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDA 119 V N + Q++ +E++I +G+ VL+I P Q L+ VVKEA GIKV+ DR +N Sbjct: 69 VTDGNNDASKQVADVESLIAQGIKVLMISPLTEQALTPVVKEAMDAGIKVVTLDRKVNTP 128 Query: 120 DIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDS 178 + ++ +N +G + L + +GN + G+ + G + + + D Sbjct: 129 -VTVHVGGENLPLGVGAGEFLAKKLNGKGNIIELQGTAGASATIDRNKGFAEAIAKHPD- 186 Query: 179 GKIKVVGDQWVDGWLPENALKIMENALTANNN-KIDAVVASNDATAGGAIQALSAQGLSG 237 +KVV Q D + + A+K ME+ + +I AV A ND A GAIQ L A G Sbjct: 187 --MKVVASQNCD-YTRDKAVKFMEDMVQRFGPGQIQAVYAHNDEMALGAIQVLEAAGRLN 243 Query: 238 KVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGL 297 +VA+ G D + + G T P +A E A ++ G+E T Sbjct: 244 EVAVVGIDGQETAFEAVKQGKLAATFVYP--FVAPEGIETAYKVAKGEEVPETIT----- 296 Query: 298 KDVPSRLLTPIDVNKNNIKDTVIK 321 L + V +NI D + K Sbjct: 297 -------LPTVSVTPDNIADMIGK 313 >UniRef50_C3QNV9 Sensor protein n=5 Tax=Bacteroides RepID=C3QNV9_9BACE Length = 960 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 76/303 (25%), Positives = 123/303 (40%), Gaps = 11/303 (3%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFV 60 MK + L L L A +IG+A R + + +I + G V + Sbjct: 5 MKYMKWITVLFCLLGLAACRQDAPRFRIGVAQCSDDSWRHKMNDEILREAMFYDGVSVEI 64 Query: 61 QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD 120 +SA + Q + I++GVD+L+I ++ +V+EA Q+GI V+ DR I Sbjct: 65 RSAADDNRKQAEDVHYFIDKGVDLLIISANEAAPMTPIVEEAYQKGIPVILVDRKILSDK 124 Query: 121 IDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSG 179 YI DN ++G + + +GN + G A G M + Y D Sbjct: 125 YTAYIGADNYEIGRAVGNYIASSLKGKGNVVELTGLGGSTPAMERHQGFMAAISNYPD-- 182 Query: 180 KIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKV 239 IK++ W E A M++ L + KIDAV A ND A GA QA G ++ Sbjct: 183 -IKLIDKADAA-WEREPAEVEMDSMLRRHP-KIDAVYAHNDRIAPGAYQAAKKAGREKEM 239 Query: 240 AISGQDADLA---GIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNG 296 G DA G++ + T P + ++A+ + + +T +N Sbjct: 240 IFVGIDALPGKGNGLELVLDNVLDATFIYPTN--GDKVMQLAMNILEKKSYPRETVMNTA 297 Query: 297 LKD 299 + D Sbjct: 298 VVD 300 >UniRef50_C6W799 Monosaccharide-transporting ATPase n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W799_DYAFD Length = 310 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 72/327 (22%), Positives = 136/327 (41%), Gaps = 24/327 (7%) Query: 1 MKIKNILLTLCTSLLLTNVA------AHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESL 54 MK I TL + LL + + IG + ++ E D KA+ + Sbjct: 1 MKRNAIFATLIAAALLAGCNQSSDNESGGDNLVIGATMLSMQNEFIVNVSDAMEAKAKEM 60 Query: 55 GAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDR 114 G ++ A + Q+ Q+E+ I +GVD +++ P + S +K A I ++ + Sbjct: 61 GVELITVDAERSALKQVEQVESFIGQGVDAIIMNPAEVEASSPAIKLAMDAKIPIINVNS 120 Query: 115 MINDADIDFYISFDNEKVGELQAKALVDIVP-QGNYFLMGGSPVDNNAKLFRAGQMKVLK 173 A ++ D+ + + K + + + +GN +M G G +LK Sbjct: 121 E-TSAKPTAFVGSDDTESARIAMKYIAEKLGGKGNILMMHGFMGQAAQIKRDNGAKDILK 179 Query: 174 PYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQ 233 + +K++ +Q + W + + EN + + +KI+A+ A ND GA++AL A Sbjct: 180 A---NPGLKLLAEQSGE-WDRAKGMSLTENWIQSYGDKINAIFAQNDEMGMGAVKALEAA 235 Query: 234 GLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTL 293 GL GKV + DA ++ + GT TV++ A E AV+ + + + Sbjct: 236 GLKGKVLVVSVDAIPDALQAVKKGTLDATVFQNAKEQGGKAIETAVKAAKKEAFEKE--- 292 Query: 294 NNGLKDVPSRLLTPIDVNKNNIKDTVI 320 L+ V+K N++ + Sbjct: 293 ---------VLIPFQLVDKGNVEGFLK 310 >UniRef50_D1AGX3 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AGX3_SEBTE Length = 319 Score = 270 bits (692), Expect = 4e-71, Method: Composition-based stats. Identities = 83/328 (25%), Positives = 151/328 (46%), Gaps = 28/328 (8%) Query: 1 MKIKN----ILLTLCTSLLLTNVAAHA---------KEVKIGMAIDDLRLERWQKDRDIF 47 MK + L S+ L + + K++K+G++I + D Sbjct: 1 MKKFRNYVIMGLVSMLSIFLISCSQKGDTADGGQGGKKIKVGVSIANFDDTFLTYMMDGM 60 Query: 48 VKKAESLG-AKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEG 106 K AE G ++ A + QM+Q+EN + +G DV++++P + + A G Sbjct: 61 KKAAEKEGDIELEFVDAKEDIAKQMNQVENFVTQGKDVIIVVPVDTSAADPMTNAAVTNG 120 Query: 107 IKVLAYDRMIND-ADIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLF 164 K++ +R + D +Y+ + +K G +Q + L + + +GN ++ G + Sbjct: 121 TKIVYVNRNPGNLPDGAYYVGSEEKKAGIMQMEYLAEKMGGKGNIVILMGKLDNEGTIKR 180 Query: 165 RAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAG 224 G ++ K Y D IK++ Q W + + EN L N+I+A+V++ND A Sbjct: 181 TEGVEEIAKKYPD---IKILDKQ-TGLWQRTDGMAKTENWLNKYGNEINAIVSNNDDMAL 236 Query: 225 GAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNG 284 GA+QAL G +G + + G DA G+ +AAG + TV++ A E+A + NG Sbjct: 237 GAVQALKDSGKTG-IFVIGVDATPDGLAALAAGDISATVFQDADGQGGGAVEVAKKAANG 295 Query: 285 QEPKADTTLNNGLKDVPSRLLTPIDVNK 312 + +T VP +L+TP ++N+ Sbjct: 296 ETVVKET-------WVPFKLVTPENINE 316 >UniRef50_B1KZY7 D-ribose-binding protein n=3 Tax=Clostridium botulinum RepID=B1KZY7_CLOBM Length = 336 Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats. Identities = 77/344 (22%), Positives = 141/344 (40%), Gaps = 44/344 (12%) Query: 1 MKIKNILLTLCTSLLLTNVA----------------AHAKEVKIGMAIDDLRLERWQKDR 44 MK +L + S LL A KEV +G+++ L + Sbjct: 1 MKKTKKILAVLLSTLLIGSAILTGCGSKESSVDKKDKDPKEVTVGLSLSSLSNAFFIGME 60 Query: 45 DIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQ 104 K +G K+ +ANG+ Q+S IE++I + VD+L++ + + VK+AK+ Sbjct: 61 KGVKDKTSEIGCKLIETNANGDIAKQLSDIEDLITKKVDILIVNALDADAIVPAVKKAKE 120 Query: 105 EGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVPQ-----GNYFLMGGSPVDN 159 I ++ DR N D+ ++ DN K+GE A+ ++ + GN + G + Sbjct: 121 ANIPIIFLDRGANSEDMTTFLETDNVKMGEQAAELILKALKDKGLNGGNVVEIEGLQGTS 180 Query: 160 NAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASN 219 A+ G V+ + + +K+V Q + E ++ +M+N L AN KIDAV N Sbjct: 181 AARDRGKGFHNVMDKHKE---VKIVAKQ-AGDFNQEKSMNVMQNILQANP-KIDAVFGHN 235 Query: 220 DATAGGAIQAL------SAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANT 273 D GA +A+ G + + G D I+ + G +++ + + Sbjct: 236 DDCTVGAEKAIIASNRMKPAGDKEHIFVVGIDGINQAIESVKKGNIDVSISQDPIGMGVQ 295 Query: 274 AAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKD 317 A E+ ++ G++ + + K+N D Sbjct: 296 AVEVGLKAIKGEQVEKHIYTKF------------FPITKDNATD 327 >UniRef50_C5VU40 D-ribose-binding protein n=4 Tax=Bacteria RepID=C5VU40_CLOBO Length = 307 Score = 268 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 74/291 (25%), Positives = 133/291 (45%), Gaps = 10/291 (3%) Query: 7 LLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGN 66 +L + + +N A+E KIGM + L + ++ KK++ LG ++ V + + Sbjct: 15 ILLVLGFVGCSNKHTQAREKKIGMVVSTLNNPFFVSLKEGAEKKSKELGYELLVLDSQND 74 Query: 67 EETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYIS 126 + S IE++I G+ VL++ P + + N V+ A + I V+ DR N ++ +I+ Sbjct: 75 PAKERSNIEDLIQGGISVLIVNPTDSDAVINSVQVANKANIPVITVDRQANGGEVVSHIA 134 Query: 127 FDNEKVGELQAKALVDIV---PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKV 183 DN K GEL + ++D + + G P + + G ++ +K+ Sbjct: 135 SDNIKGGELASSFIIDELKNKKDIKVVELQGIPGASATRERGKGFHNIIDKK---SNLKL 191 Query: 184 VGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISG 243 + Q + L +MEN + A ++ DAV A ND A GA +AL K+ + G Sbjct: 192 ISSQ-AANFDRAQGLSVMENIIQAQSD-FDAVFAHNDEMALGAAKALKTANK--KIIVVG 247 Query: 244 QDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLN 294 D D I + TV + L+ +T+ E AV++ NGQ + + Sbjct: 248 FDGDEDAKTAIEKSEISATVAQQPALMGSTSIETAVKISNGQNISKNIPVK 298 >UniRef50_Q7MEU9 ABC-type sugar transport system, periplasmic component n=13 Tax=Bacteria RepID=Q7MEU9_VIBVY Length = 292 Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 74/308 (24%), Positives = 138/308 (44%), Gaps = 17/308 (5%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFV 60 MK L++ ++ A A++ + + + L + +D +A+ LG + V Sbjct: 1 MKKLATLISAALLTSTVSLGAQAQD-TMAIVVSTLNNPFFVTMKDGAETRAKELGYNLIV 59 Query: 61 QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD 120 + + ++S +E++ RGV ++I P + +SN ++ A + I VL DR + D Sbjct: 60 LDSQNDPSKELSNVEDLTIRGVKAILINPTDSDAVSNAIRIANRSKIPVLTLDRGASRGD 119 Query: 121 IDFYISFDNEKVGELQAKALVDIVP-QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSG 179 + +I+ DN GE+ +V+ V + + G + A+ G M +K Sbjct: 120 VVSHIASDNVVGGEMAGNFIVEKVGEKAKVIQLEGIAGTSAARERGEGFMNAVK----GS 175 Query: 180 KIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKV 239 ++++ Q D + L +MEN L AN + + AV A ND A GA++A+ A G +V Sbjct: 176 HMELLASQPAD-FDRTKGLNVMENLLAANPD-VQAVFAQNDEMALGALRAIQASGK--EV 231 Query: 240 AISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKD 299 I G D GI + G T+ + L+ E A ++ G++ + Sbjct: 232 MIVGFDGTDDGIAAVNRGKLAATIAQQPDLIGALGIETADKVLKGEQVE-------DYIP 284 Query: 300 VPSRLLTP 307 VP +++T Sbjct: 285 VPLKVVTK 292 >UniRef50_A8GD74 Periplasmic binding protein/LacI transcriptional regulator n=19 Tax=Enterobacteriaceae RepID=A8GD74_SERP5 Length = 309 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 74/326 (22%), Positives = 145/326 (44%), Gaps = 23/326 (7%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLG-AKVF 59 MK+K +++T +L AK++KIG+++ R K + G Sbjct: 1 MKLKKLIVTSVLMCMLPASVL-AKDIKIGVSMAYFDDNFLTILRQSMQSKMKQDGNVSGQ 59 Query: 60 VQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIND- 118 + A G+ Q+ QIEN +++GVD +++ P + Q + ++K A+ I ++ +R Sbjct: 60 FEDAKGDIAQQIQQIENFVSQGVDAIILNPVDTQGVKPMIKLAESAKIPLVFVNRRPEVT 119 Query: 119 -ADIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYV 176 Y+ D++ G+LQ + L ++ +GN ++ G + + G +V Y Sbjct: 120 LPAGMAYVGSDSKLAGKLQMEELAKLMNGKGNVMILMGELSNEATRDRTRGVEEVAAKYP 179 Query: 177 DSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS 236 IK++ Q W + A+ I + +IDA+ ++ND A GAI AL S Sbjct: 180 ---GIKILDKQTAK-WGRKEAVDITTDWALT-GQQIDAIASNNDEMAIGAILALKQAKKS 234 Query: 237 GKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNG 296 G V ++G D ++ I G ++V++ A + A++L G++ +++ Sbjct: 235 G-VLVAGVDGTPDALEYIKKGDLALSVFQDAKGQGEGAVQTAIQLVKGEKVESN------ 287 Query: 297 LKDVPSRLLTPIDVNKNNIKDTVIKD 322 L+ + K N ++ K+ Sbjct: 288 ------VLIPYQLITKANYQEFADKN 307 >UniRef50_Q48J93 Sugar ABC transporter, periplasmic sugar-binding protein n=4 Tax=Pseudomonas RepID=Q48J93_PSE14 Length = 308 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 73/310 (23%), Positives = 136/310 (43%), Gaps = 17/310 (5%) Query: 6 ILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANG 65 LLL + A +IG+ I + R + A ++ + A G Sbjct: 3 FCKLFIAVLLLVSSQWAAASYRIGVTIARVDDNFMTYVRSGLEEAARKENVQLQFEDAQG 62 Query: 66 NEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIND---ADID 122 + Q++Q++ +++ VD ++++P + +N+ + A + + ++ +R ++ Sbjct: 63 DVVRQINQVQGFLSQKVDAVIVLPVDTSATANMTRAAVEAKMPLVYVNRHPDERVLPKGV 122 Query: 123 FYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKI 181 ++ ++ + G+LQ + L + + +G L+ G N+ G +VLK Y I Sbjct: 123 TTVASNDIEAGQLQMRYLAEKMGGKGTIALIMGDLAQNSTHDRSEGVKQVLKDYP---GI 179 Query: 182 KVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGL-SGKVA 240 +V Q + W + + N L A DA+VA+ND A GA AL G G+VA Sbjct: 180 TIVEQQTAE-WQRNKGMDLTSNWLLA-GRTFDAIVANNDEMAIGAAMALQQAGKAKGEVA 237 Query: 241 ISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDV 300 I G D G+ I G +V++ A TA + A+++ G+ A+ V Sbjct: 238 IVGIDGLPDGLAAIKRGMLAASVFQDPKAQATTALQSAIKMIKGEPVDAEV-------WV 290 Query: 301 PSRLLTPIDV 310 P +L+TP V Sbjct: 291 PFQLITPEQV 300 >UniRef50_Q97JD5 Periplasmic sugar-binding protein n=1 Tax=Clostridium acetobutylicum RepID=Q97JD5_CLOAB Length = 319 Score = 264 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 83/324 (25%), Positives = 153/324 (47%), Gaps = 23/324 (7%) Query: 1 MKI--KNILLTLCTSLLLTNVAAH------AKEVKIGMAIDDLRLERWQKDRDIFVKKAE 52 MK + +++ T LLT A +K+ +IG++I K + +A+ Sbjct: 1 MKKTSRILIIFAATCFLLTACAQKKSIVYKSKKYRIGLSIPASDDVFRNKIINAMENEAK 60 Query: 53 SL-GAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLA 111 +L + V +A G+ Q SQI N++ + + ++++P + + S+ + A GI +++ Sbjct: 61 NLPDTDLVVVNAKGDPARQKSQISNLVAQKCNAILVLPVDTLLSSDYTQIANDSGIPIIS 120 Query: 112 YDRMIND-ADIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQM 169 + + + D Y+ D+ G ++A+ V + +GN ++ G P A G Sbjct: 121 VNNFLKNQDDAAAYVGSDSITSGIMEAEYAVKQLNGKGNVVILKGEPNHETAIKRTEGFK 180 Query: 170 KVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQA 229 +VL+ Y + IK++ +Q+ D W ++I EN + N K DA++A+ND A GAI A Sbjct: 181 QVLQNYPE---IKIIDEQYGD-WKRTLGMQITENWI-KNGTKFDAILANNDEMAIGAIMA 235 Query: 230 LSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKA 289 L L V + G DA +K + G+ +TV++ + A + A +L G++ Sbjct: 236 LKENNLINNVFVGGIDATPDALKLLKEGSLKVTVFQNAAGQGSEAIKAAYKLVKGEKI-- 293 Query: 290 DTTLNNGLKDVPSRLLTPIDVNKN 313 N VP L+ P D +K Sbjct: 294 -----NKKIFVPYELVVPNDADKY 312 >UniRef50_D2BKS5 Ribose ABC transporter, substrate binding protein n=16 Tax=Streptococcaceae RepID=D2BKS5_LACLK Length = 324 Score = 264 bits (675), Expect = 4e-69, Method: Composition-based stats. Identities = 64/293 (21%), Positives = 123/293 (41%), Gaps = 16/293 (5%) Query: 21 AHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINR 80 E+ IG++I + + A+ K+ V A + TQ++ ++N I++ Sbjct: 44 KKPNELNIGVSISTTNNPYFVSMNNAIKSMAKEKNTKLTVSDAQNDSATQLNNVQNFISQ 103 Query: 81 GVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKAL 140 VD ++I P + + +K A I V+A DR N + ++ DN G++ A+A+ Sbjct: 104 NVDAILINPVDSDAIVPAIKAANNAHIPVIAMDRGSNGGTVLTTVASDNVAAGKMAAQAV 163 Query: 141 VDIVPQG-NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALK 199 +V + + G+P + G K + ++ Q + L Sbjct: 164 EKLVGKNVKVLELSGTPGASATIDRGKGFNSEAKTL----GLNILSSQSA-NFDRTTGLN 218 Query: 200 IMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQ 259 +N L ++ + + A+ A ND A GA +A+ A G K+AI G D + I AGT Sbjct: 219 TTQNMLQSHKD-VQAIFAQNDEMALGAAKAVQATG--QKIAIFGIDGESETHDAIKAGTM 275 Query: 260 TMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNK 312 T T+ + + A + + G++ + + P L+ +V++ Sbjct: 276 TATIAQQPAKIGEMALQATYDYYQGKKIA-------HMINSPIYLVDKDNVDQ 321 >UniRef50_Q2SMT1 ABC-type sugar transport system, periplasmic component n=12 Tax=Proteobacteria RepID=Q2SMT1_HAHCH Length = 309 Score = 264 bits (675), Expect = 4e-69, Method: Composition-based stats. Identities = 78/317 (24%), Positives = 143/317 (45%), Gaps = 17/317 (5%) Query: 3 IKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQS 62 +K + L++ S + A A ++KIG+++ R+ A+ V ++ Sbjct: 1 MKKLALSVLASAMFAGSVAAA-DLKIGVSMAVFDDNFLTALRNGIETAAKDKSVDVQIED 59 Query: 63 ANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIND---- 118 TQ++QI+N I GVD +++ P + ++ +A+ GI ++ +R + Sbjct: 60 GKNEVGTQLNQIQNFIASGVDAIIVNPVDTDATVSISSDAEAAGIPLIYVNRQPINVNQL 119 Query: 119 ADIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVD 177 D +++ + E G LQ + + ++ +GN +M G + A V+K + Sbjct: 120 PDNQAFVASNEEVSGTLQTEEVCRLLGGKGNVVVMMGELSNQAAIQRTKDIHDVIKRK-E 178 Query: 178 SGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS- 236 +KVV +Q + W +M N L+A + DAV+++ND A GAIQAL A G Sbjct: 179 CSGMKVVAEQTAE-WSRLKGNDLMTNWLSA-GLEFDAVISNNDEMAIGAIQALKASGRKM 236 Query: 237 GKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNG 296 V ++G DA + + +G +TV++ A + AV L G+ Sbjct: 237 DSVVVAGIDATPDALAAMKSGDLDVTVFQSAKGQGAGAVDAAVRLAKGENVDQKV----- 291 Query: 297 LKDVPSRLLTPIDVNKN 313 VP L+TP +++K Sbjct: 292 --WVPFELVTPANLDKY 306 >UniRef50_A5F1B8 Ribose ABC transporter, periplasmic D-ribose-binding protein n=31 Tax=Vibrio RepID=A5F1B8_VIBC3 Length = 294 Score = 263 bits (674), Expect = 5e-69, Method: Composition-based stats. Identities = 73/300 (24%), Positives = 136/300 (45%), Gaps = 10/300 (3%) Query: 1 MKIKNILLTLCTSLLLTNVAA-HAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVF 59 M++K + + +LL T+V+ + + + + L + +D KA+ LG + Sbjct: 1 MRMKKLTTLISAALLSTSVSFVAQAQDTVAIVLSTLNNPFFVTMKDGAEAKAKELGYNLI 60 Query: 60 VQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDA 119 V + + ++S +E++ RGV ++I P + +SN ++ A + I VL DR + Sbjct: 61 VLDSQNDPSKELSNVEDLTVRGVKAILINPTDSDAVSNAIRIANRSKIPVLTLDRGASRG 120 Query: 120 DIDFYISFDNEKVGELQAKALVDIVP-QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDS 178 ++ +I+ DN GE+ + + + G + A+ G M +K Sbjct: 121 EVVSHIASDNVVGGEMAGHFIEAKIGSDAKVIQLEGIAGTSAARERGEGFMNAVK----G 176 Query: 179 GKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGK 238 K++++ Q D + L +MEN L AN + + AV A ND A GA++A+ A G S Sbjct: 177 SKMQLLASQPAD-FDRTKGLNVMENLLAANPD-VQAVFAQNDEMALGALRAIQASGKS-- 232 Query: 239 VAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLK 298 V I G D GI + G TV + ++ E A ++ G++ +A + + Sbjct: 233 VMIVGFDGTDDGIAAVERGQLAATVAQQPDMIGAIGIETADKMLKGEKVEAYIPVALKVI 292 >UniRef50_B8I2K0 Periplasmic binding protein/LacI transcriptional regulator n=3 Tax=Clostridium RepID=B8I2K0_CLOCE Length = 333 Score = 259 bits (664), Expect = 7e-68, Method: Composition-based stats. Identities = 79/302 (26%), Positives = 139/302 (46%), Gaps = 20/302 (6%) Query: 18 NVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENM 77 K++ +GM + L+ E + + KKA LG ++ + N + TQ++Q+E M Sbjct: 46 TSKPADKKIVVGMTLYSLKNEFTVRLSNAAKKKAAELGVELKIYDGNYDPNTQINQVETM 105 Query: 78 INRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQA 137 I+ GVD +++ P + + + V +A I V+ + ++ + Y+ + GEL+ Sbjct: 106 ISDGVDAIILNPQDAKACAVAVDKAAAANIPVIGVNTRVDSEKLTSYVGSKDVYAGELEM 165 Query: 138 KALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPEN 196 +A+ D + +GN ++ G + G VLK Y D IKV+ ++ W Sbjct: 166 QAIADKIGGKGNIVILDGPLGQSAQLERSEGIQNVLKKYPD---IKVLAEKTA-NWSRSE 221 Query: 197 ALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAA 256 A+ +MEN L A +KIDAVVA ND A GA +A+ A+ L + G D + + Sbjct: 222 AMTVMENWLQAF-DKIDAVVAENDEMALGARKAIEAKKLD--IPTIGVDGITDALDAVEK 278 Query: 257 GTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIK 316 GT T+++ + A EIAV G+ + ++ V K+N+ Sbjct: 279 GTLIATIFQDGAGQGSKALEIAVAKAKGENVDKEYWIDF------------EPVTKDNVA 326 Query: 317 DT 318 + Sbjct: 327 EF 328 >UniRef50_A5ZMP8 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZMP8_9FIRM Length = 376 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 114/370 (30%), Positives = 184/370 (49%), Gaps = 43/370 (11%) Query: 1 MKIKNILLTLCTSLLLTNVA-------AHAKEVKIGMAIDDLRLERWQKDRDIFVKKAES 53 MK K ++L + ++ +T+ A A A+ KIG+++ LERW +D ++ ++ Sbjct: 1 MKKK-LVLAMAATMAITSCAVPVLADDAAAEGGKIGISMPTQSLERWNRDGSYLEEQFKA 59 Query: 54 LGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYD 113 G V + ++ + Q++ I+N+I+ GV++LVI +G+ L+ V+ EA GI V+AYD Sbjct: 60 AGYDVELTYSDNETDRQVNDIQNLISDGVNLLVIAAIDGEALNTVMDEAADAGIPVIAYD 119 Query: 114 RMINDADIDFYISFDNEKVGELQAKALVDIV-------PQGNYFLMGGSPVDNNAKLFRA 166 R+I + +YISFDN VG LQ + ++D + N G P DNNA F Sbjct: 120 RLIKSDAVSYYISFDNYTVGTLQGQYVIDTLDLDNAGDKTYNIEFTAGDPADNNAGYFFN 179 Query: 167 GQMKVLKPYVDSGKIKVVGDQW------VDGWLPENALKIMENALTAN---NNKIDAVVA 217 G LKPY+D+G + VV Q W + AL+ M+N L + ++D + Sbjct: 180 GAYDTLKPYLDAGTLNVVSGQTDFDSVATAAWDTQTALERMQNILASYYADGTQLDVALC 239 Query: 218 SNDATAGGAIQALSA--QGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAA 275 SND+TA G QA+ + G + V I+GQD D A + I G Q+MTVYK + A Sbjct: 240 SNDSTALGVTQAIESDYAGKND-VLITGQDGDEANLANIVDGKQSMTVYKAVANEAVVTL 298 Query: 276 EIAVELGNGQEPKADTTLNNGLK----------------DVPSRLLTPIDVNKNNIKDTV 319 ++A + G N+ PS LL P V K+N+K+ + Sbjct: 299 DLAEAMLKGDTIDDSLITNSKWDFDCAYDTESYETSEGHKCPSFLLVPTVVTKDNMKEEL 358 Query: 320 IKDGFHKESE 329 + G++ + + Sbjct: 359 VDTGYYTQDD 368 >UniRef50_Q7UNV9 Bifunctional carbohydrate binding and transport protein n=1 Tax=Rhodopirellula baltica RepID=Q7UNV9_RHOBA Length = 438 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 63/322 (19%), Positives = 131/322 (40%), Gaps = 16/322 (4%) Query: 4 KNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSA 63 ++ C T+ KE+ + WQ + + E +GAK+ + Sbjct: 120 TLLVCAGCQPPADTSANTGEKELHFAVIPKGTTHIFWQSVKHGAEQAGEEIGAKITFRGP 179 Query: 64 --NGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDA-- 119 + + Q++ ++ +N VD +++ P + L VKEA + G+ V+ +D +N Sbjct: 180 SKENDRDEQINVVQGFLNARVDGILLAPLDADALVRPVKEASRAGVPVVIFDSGLNTDPG 239 Query: 120 DIDFYISFDNEKVGELQAKALVDIVPQ--GNYFLMGGSPVDNNAKLFRAGQMKVLKPYVD 177 D Y++ DN + G+L +A+ + + + G+ L+ + G + + Y Sbjct: 240 DFVSYVATDNFEGGKLAGEAMANALGEKGGDVILLRYEQGSESTHQREEGFLYSIAEY-- 297 Query: 178 SGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSG 237 I+V+ G E+A+ + L ++ D + + TA GA++AL + L+G Sbjct: 298 -SNIRVLSSDQYAGTTTESAIDKAQALLNRFGDEADGICTVCEPTAEGALRALRERKLAG 356 Query: 238 KVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGL 297 KV + D+ + + ++AG V + + A + G+ P+ Sbjct: 357 KVKLVTFDSSDSLRESLSAGEVNAIVLQDPVAMGYQAVKTMAAHLRGETPE-------QF 409 Query: 298 KDVPSRLLTPIDVNKNNIKDTV 319 D + T + + NI + Sbjct: 410 IDTGVFVATAKNQDDENIARLL 431 >UniRef50_B1B7W7 D-ribose-binding periplasmic protein n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1B7W7_CLOBO Length = 325 Score = 258 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 83/332 (25%), Positives = 136/332 (40%), Gaps = 30/332 (9%) Query: 1 MKIKNILLTLCTSLLLT----NVAAHAKEV---------KIGMAIDDLRLERWQKDRDIF 47 MK K +L + T +L+ A + + + + L + W+ + Sbjct: 1 MKGKRLLGIILTLGMLSCVFGGCGNSADQGKGGEKGKGGNVAVVLKALNSDYWKTVQAGA 60 Query: 48 VKKAESLGAKVFVQ--SANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQE 105 A+ LG KV V +A + Q S IE+ I +GVD LV+ P +A++E Sbjct: 61 NDAAKELGVKVQVLGPNAETDVVGQTSLIEDQIVKGVDALVVAPLQPNAAITTFDKAEKE 120 Query: 106 GIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVPQGN-YFLMGGSPVDNNAKLF 164 I V+ D N ++ N G+L + + + +G+ ++ G P D Sbjct: 121 KIPVVLIDTDANWDKKKSFVGTGNIAAGKLGGEYISKKLKKGDEAIIIRGVPGDRTQDER 180 Query: 165 RAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAG 224 G K L ++ IKVV Q E A+ +MEN L + N I V +ND A Sbjct: 181 TQGAQKAL----EAAGIKVVEIQPA-NSEREKAISVMENLLQTHPN-IKGVFCTNDEMAL 234 Query: 225 GAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNG 284 GA++AL G ++I G D +K I G T TV + + E AV++ G Sbjct: 235 GAVKALQQAGKKNIISI-GVDGSPDALKSIKEGGLTGTVAQNSYDIGKKGVETAVKVLRG 293 Query: 285 QEPKADTTLNNGLKDVPSRLLTPIDVNKNNIK 316 ++ + D + L+ +VN+ K Sbjct: 294 EKVE-------TRIDTGTTLVDKQNVNEQEAK 318 >UniRef50_B1G9I5 Monosaccharide-transporting ATPase n=2 Tax=Burkholderia graminis C4D1M RepID=B1G9I5_9BURK Length = 358 Score = 258 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 101/304 (33%), Positives = 174/304 (57%), Gaps = 1/304 (0%) Query: 28 IGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVI 87 IG + RW DR F K+A+ LG + +Q AN + TQ SQ++ M+++G+ LVI Sbjct: 50 IGFSFPSFDAFRWPHDRHYFEKRADELGLRYIIQGANEDVATQDSQVDAMLSQGIKALVI 109 Query: 88 IPYNGQVLSNVVKEAK-QEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVPQ 146 IP N +V+ K + I +++Y+ +I +D++ DN VGELQA+ + + Sbjct: 110 IPVNVDAGKQIVERVKREAKIPIISYNYVIPSTAVDYWAGRDNYFVGELQARQALQEAKK 169 Query: 147 GNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALT 206 GN+ ++ G + A+ G ++VLKP++DSG+I++V QW D W PE ALK +E+ALT Sbjct: 170 GNWVIVSGPEGIDVARQKTEGALRVLKPHIDSGEIRIVSHQWHDAWSPEGALKQVEDALT 229 Query: 207 ANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKP 266 ++NN I AV+++ D A GA++AL+ Q L+GKV + G+D + I AG M+ + Sbjct: 230 SHNNNIQAVISNEDGMALGALRALAEQKLAGKVWLCGEDCWPEVAREIVAGRINMSAWTD 289 Query: 267 ITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHK 326 + + AA+ A L +GQ P + ++ + +P + + VN+ + D + + + K Sbjct: 290 LIQMGRVAADAAFALTHGQVPPGNDSITVSGRKIPGMRIGSLGVNRTTLPDFLKRTDWLK 349 Query: 327 ESEL 330 +++ Sbjct: 350 PADI 353 >UniRef50_A4AIX2 Solute-binding protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AIX2_9ACTN Length = 342 Score = 258 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 113/334 (33%), Positives = 171/334 (51%), Gaps = 15/334 (4%) Query: 5 NILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQK-DRDIFVKKAESL--GAKVFVQ 61 L L E I + + + + R++ DR F K L +V Sbjct: 1 MFASLLLGGCTLIGANGADAEYTIALLLPESKTARYEAYDRPFFEAKVAELCPKCEVIYA 60 Query: 62 SANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADI 121 +A+ + Q Q E+ +G+ VLV+ P + +V A+ + V++YDR+I ++ Sbjct: 61 NADQDPVKQQQQAESAFAQGISVLVLDPVDSSAAVTIVAAAQSRKVPVISYDRLIGSPEL 120 Query: 122 DFYISFDNEKVGELQAKAL-----VDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYV 176 F++SFDNEKVG LQ KAL D + GN ++ GSP DNN++LF+ G V+ Sbjct: 121 AFWVSFDNEKVGSLQGKALIERLAADGLSSGNIAMINGSPTDNNSRLFKKGAHNVI---- 176 Query: 177 DSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS 236 D VV + W P+ A + M + +T N + V A+NDATAGGAI AL A G+ Sbjct: 177 DGSAFTVVAEFDTPDWSPDKAQEWMASQVTQFGNSLVGVYAANDATAGGAIAALKAGGVM 236 Query: 237 GKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNG 296 ++GQDA+L I+RI +G Q MT+YK A AA AV L NG+ + NG Sbjct: 237 PLPPVTGQDAELTAIQRIVSGDQYMTIYKDFKREAEIAATHAVALLNGKTLVGQSEETNG 296 Query: 297 LKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 +P+ LL+P+ V +NI +TV+ DG + ++ Sbjct: 297 ---IPTTLLSPVIVTIDNIMETVVADGLYTVEQI 327 >UniRef50_Q11DN9 D-xylose ABC transporter, periplasmic substrate-binding protein n=50 Tax=Bacteria RepID=Q11DN9_MESSB Length = 347 Score = 258 bits (659), Expect = 3e-67, Method: Composition-based stats. Identities = 132/334 (39%), Positives = 194/334 (58%), Gaps = 8/334 (2%) Query: 1 MKIKNILLTLCTSLLLTNVAAHA-KEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVF 59 MK + + L+ +A + IG++ + + ERW+ D + E+ G Sbjct: 1 MKNTATAVLAGIAFSLSLSSAALAEGKTIGVSWSNFQEERWKTDEAAIKAQIEADGNTYI 60 Query: 60 VQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDA 119 A + Q++ +E++I +G + L+I+ + + V+ A EGI V+ YDR+I + Sbjct: 61 SADAQSSPAKQLTDVESLIAQGANALIILAQDASAVGPAVENAVAEGIPVIGYDRLIENP 120 Query: 120 DIDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSG 179 D FY++FDN++VG +QA+A+ ++ P+GNY + GS D NA GQM+VLK +DSG Sbjct: 121 D-AFYLTFDNKEVGRMQARAVFEVAPEGNYVFIKGSSADPNADFLFEGQMEVLKEAIDSG 179 Query: 180 KIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKV 239 KIK VG+ + DGWLP NA + ME LTANNN++ AVVASND TAGGAI AL AQGL+G V Sbjct: 180 KIKNVGEAYTDGWLPANAQRNMEQFLTANNNEVAAVVASNDGTAGGAIAALEAQGLAGSV 239 Query: 240 AISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNG---QEPKADTTLNNG 296 +SGQD D A + RIA GTQT++V+K L AA+IA +L G + + T G Sbjct: 240 PVSGQDGDHAALNRIALGTQTVSVWKDARELGKAAAQIANQLAEGTAMDQVEGATKWAEG 299 Query: 297 LKDV--PSRLLTPIDVNKNNIKDTVIKDGFHKES 328 V S L P+ + K+N+ VI G+ + Sbjct: 300 PNKVEMNSVFLKPVPITKDNLN-LVIDAGWVTKD 332 >UniRef50_Q0SSJ2 Ribose ABC transporter, ribose-binding protein n=10 Tax=Clostridium RepID=Q0SSJ2_CLOPS Length = 301 Score = 258 bits (659), Expect = 3e-67, Method: Composition-based stats. Identities = 72/302 (23%), Positives = 127/302 (42%), Gaps = 11/302 (3%) Query: 2 KIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQ 61 KI ++ L L + + KIGM + L + +D K+AE LG + V Sbjct: 6 KIFSVGLMLMMLMTSFIGCGRDNKPKIGMVLSTLNNPFFVNMKDGAEKEAEKLGYDLVVL 65 Query: 62 SANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADI 121 + + + + +E++I GV L+I P + + V+ A + I V+ DR N I Sbjct: 66 DSQNDPAKERANVEDLIQLGVIALLINPTDSDAVVKTVEVANKSNIPVITLDRQANGGKI 125 Query: 122 DFYISFDNEKVGELQAKALVDIVPQ----GNYFLMGGSPVDNNAKLFRAGQMKVLKPYVD 177 +I+ DN K GE+ A+ ++D N + G P + + G ++ Sbjct: 126 TSHIASDNIKGGEMAAEYVLDKFKDEKGPINVVEIQGIPGASATRDRGEGFHNIMDKNDK 185 Query: 178 SGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSG 237 I + + + L++MEN + AN N I V A ND A GA++A+ A G++ Sbjct: 186 FNFISI----QAADFDRQKGLQVMENIIQANPN-IQVVFAHNDEMALGAVKAIKASGINA 240 Query: 238 KVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGL 297 + G D + I A T + + L+ E+A ++ G+ K + + Sbjct: 241 --LVIGFDGNDDAKDSIDANEMTAIIAQQPDLIGALGVELANKIYKGESIKNKIAADLKV 298 Query: 298 KD 299 Sbjct: 299 YT 300 >UniRef50_A6L0Y3 Sensor protein n=17 Tax=Bacteroides RepID=A6L0Y3_BACV8 Length = 908 Score = 258 bits (659), Expect = 3e-67, Method: Composition-based stats. Identities = 71/303 (23%), Positives = 129/303 (42%), Gaps = 11/303 (3%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFV 60 MK + L LC +LT+ + IG++ R + + +I + G +V + Sbjct: 1 MKKHLLFLILCLMGILTSCSQKHTRYYIGVSQCSDDEWRHKMNHEIVREALFYDGVEVEI 60 Query: 61 QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD 120 ++A N Q+ I I+R VD+L++ P ++ VV++A GI V+ DR I Sbjct: 61 RTAKDNSRNQIEDINYFIDRKVDLLIVAPNEAAAVTPVVEKAYGLGIPVVVIDRKILSDR 120 Query: 121 IDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSG 179 ++ DN ++G+ + +V+ + +G + G A G LK Sbjct: 121 YTAFVGADNCEIGKDVGQYIVNRLGGKGKILEITGLEGSTPAMERHRGLADALKA---EP 177 Query: 180 KIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKV 239 I++ WL A + M++ L N I+ V A ND A GA + + L ++ Sbjct: 178 GIEITASVDGA-WLQSVAGEKMDSILQDNKG-INLVFAQNDRMAVGAYLSARQRQLEKEM 235 Query: 240 AISGQDADLA---GIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNG 296 G DA G++++ G T P + ++A+++ + + DT L+ Sbjct: 236 LFVGIDALPGKGYGVEQVLEGVLDATFIYPTG--GDKVMQVAMDILEKRPYERDTKLSTA 293 Query: 297 LKD 299 L D Sbjct: 294 LVD 296 >UniRef50_C5EHH7 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHH7_9FIRM Length = 330 Score = 256 bits (655), Expect = 8e-67, Method: Composition-based stats. Identities = 78/305 (25%), Positives = 139/305 (45%), Gaps = 20/305 (6%) Query: 17 TNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESL-GAKVFVQSANGNEETQMSQIE 75 + A A+E+ IG + +L E + + ++ K+ + A + Q SQ++ Sbjct: 37 ADTEAAAEELVIGCTLQNLSEEFMTMLQGAMELQLKNYDNVKLIINDAESQSDKQASQLD 96 Query: 76 NMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGEL 135 + + +GVD ++I P + L++ VK GI V+ + ++ NE GE+ Sbjct: 97 SFVAQGVDAVIISPVDADALASAVKTVVDAGIPVITCSADVTGDQGQVWVGSSNENGGEI 156 Query: 136 QAKALVDIVP-QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLP 194 + K + + + +G ++ G + AG VLK Y D I++V DQ W Sbjct: 157 EMKYVAEKLGGKGKIAVLRGPLGAFAEQGRFAGYETVLKDYPD---IEIVFDQ-TGNWQR 212 Query: 195 ENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRI 254 E A+ ++EN LTA ++DA+V ND A GA++A+ A G ++ I+G DA + + I Sbjct: 213 EEAMALIENLLTA-GTELDAIVCQNDGMALGALEAVKAAGKKDQITITGIDAIVDALDSI 271 Query: 255 AAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNN 314 AG T ++ A ++AV+ G+ + D+P L V K+N Sbjct: 272 KAGELDATCFQDAIGQGTNALDMAVKAARGETVER--------MDIPFEL-----VTKDN 318 Query: 315 IKDTV 319 + Sbjct: 319 VDGYY 323 >UniRef50_C5ESX5 Multiple sugar-binding periplasmic receptor chvE n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ESX5_9FIRM Length = 357 Score = 256 bits (655), Expect = 8e-67, Method: Composition-based stats. Identities = 117/350 (33%), Positives = 184/350 (52%), Gaps = 21/350 (6%) Query: 2 KIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQ 61 ++ + L + + + +K+ IG+++ L R QKD++ K +G +V VQ Sbjct: 7 RLMVTCMVLGMAAMALGGCSSSKKKVIGVSLPTQDLARTQKDQEYLTKYLTEMGYEVNVQ 66 Query: 62 SANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRM-INDAD 120 G+ Q S IENMI GV L+I P++ ++ V++ A + I V++YD + +N Sbjct: 67 FGKGDANIQASSIENMITSGVAGLIISPFDSSSMTKVIELAHENNIPVISYDSLCLNTEY 126 Query: 121 IDFYISFDNEKVGELQAKALVDIV----PQG--NYFLMGGSPVDNNAKLFRAGQMKVLKP 174 ID+Y + D E +G QA+ +VD + +G N ++ G P DNNA F G M VL P Sbjct: 127 IDYYSADDLEGIGACQAQYIVDHLGVAEGKGPFNIEIVAGDPADNNATYFYKGAMDVLSP 186 Query: 175 YVDSGKIKVVGDQW------VDGWLPENALKIMENALTANNNK--IDAVVASNDATAGGA 226 Y++ G + V Q W A M++ L+ +DAV+ ND A GA Sbjct: 187 YLEDGSLVVPSGQIEFAVCGTPEWDGSKAQSRMDSILSTYYTDKRVDAVLTQNDGIALGA 246 Query: 227 IQALSAQGLS----GKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELG 282 I +L + G +GQD D+A IK I AG QTMTV+K I++LA AA++ L Sbjct: 247 ISSLKSVGYGSSDMPLPITTGQDCDIASIKSILAGEQTMTVFKDISVLAKNAADVIDSLV 306 Query: 283 NGQEPKAD--TTLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 G+EPK + TT NNG+KDV + L+ P ++K+N + + G++ + L Sbjct: 307 KGEEPKLENYTTFNNGVKDVKATLVIPKALDKDNCDELLFDSGYYSKDML 356 >UniRef50_A8GZV8 Monosaccharide-transporting ATPase n=29 Tax=Gammaproteobacteria RepID=A8GZV8_SHEPA Length = 299 Score = 255 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 69/298 (23%), Positives = 129/298 (43%), Gaps = 10/298 (3%) Query: 3 IKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQS 62 ++LL+ + T+ +A A++ I + + + + +D KA LG K+ Sbjct: 8 KVSVLLSAALLSVSTSFSASAQDA-IAIVLSTMNNPFFVTMKDGAEAKAAELGYKLIALD 66 Query: 63 ANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADID 122 + + +++ +E++ RGV ++I P + ++N ++ A + I VL DR DI Sbjct: 67 SQNDPSKELANVEDLTMRGVKAILINPTDALAVTNAIRTANRANIPVLTLDRTAAHGDIV 126 Query: 123 FYISFDNEKVGELQAKALVDIVPQ-GNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKI 181 +I+ DN GEL + + + + + G + A+ G + + Sbjct: 127 SHIASDNIAGGELAGEFIAQQLGKNAKVIQLEGIAGTSAARERGEGFSNAVT----ANNF 182 Query: 182 KVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAI 241 +++ Q D + L +MEN L AN + + AV A ND A GA++A+ A G + + Sbjct: 183 ELLSSQPAD-FDRSKGLNVMENMLAANGD-VQAVFAQNDEMALGALRAIEAAGKD--ILV 238 Query: 242 SGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKD 299 G D GI + + TV + LL TA A + GQ + + + Sbjct: 239 IGFDGTDEGIAAVRRQQLSATVAQQPELLGATAIMTADRILKGQVVEKSIPVALKIIT 296 >UniRef50_Q9KAG4 Sugar ABC transporter (Sugar-binding protein) n=1 Tax=Bacillus halodurans RepID=Q9KAG4_BACHD Length = 323 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 80/336 (23%), Positives = 151/336 (44%), Gaps = 34/336 (10%) Query: 1 MKIKNILLTL---CTSLLLTNVAAHAK--------------EVKIGMAIDDLRLERWQKD 43 MK +L SLLL + + + IG++I +L E Sbjct: 1 MKKNKTILIAFSILMSLLLAACGSGGETSGDGNGESTGDSGQKVIGVSISNLD-EFLTYM 59 Query: 44 RDIFVKKAESL-GAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEA 102 +D ++A + + A + QM+Q+EN I+R VD +++ P + ++V Sbjct: 60 QDAMKEEAANYPDFEFIFSDAQNDSTQQMAQVENFISRNVDAIIVNPVDTTSAVDIVNMV 119 Query: 103 KQEGIKVLAYDRMINDAD-IDFYISFDNEKVGELQAKALVDIVP-QGNYFLMGGSPVDNN 160 GI ++ +R + D ++ ++ + G LQ + + ++ +GN +M G Sbjct: 120 NDAGIPIIIANRTFDGVDQATAFVGSESIQSGLLQMEEVAKLLNNEGNIAIMDGELGHEA 179 Query: 161 AKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASND 220 + G ++++ + ++VV Q + +++MEN L + +IDAVVA+ND Sbjct: 180 QIMRTEGNKQIIEEHD---GLEVVL-QGTAKFDRSEGMRLMENWLNS-GTEIDAVVANND 234 Query: 221 ATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVE 280 A GAI AL A G V ++G DA A ++ + G +TV++ T+ ++AV+ Sbjct: 235 EMALGAILALEAVGKLDDVIVAGIDATPAALEAMKEGKLDVTVFQDAKGQGATSVKVAVQ 294 Query: 281 LGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIK 316 NG++ + +P L+TP +V + K Sbjct: 295 AANGEDVED--------AMIPYELVTPENVEEYEAK 322 >UniRef50_A9KQP6 Putative solute-binding component of ABC transporter n=4 Tax=Clostridiales RepID=A9KQP6_CLOPH Length = 355 Score = 254 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 111/341 (32%), Positives = 175/341 (51%), Gaps = 18/341 (5%) Query: 8 LTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNE 67 + + + +G+A+ L+RW +D K+ + G +V +Q A+ + Sbjct: 14 VVSLAGCGSKATSGKGSDKLVGVAMPTKDLQRWNQDGSNMEKQLKDAGYEVDLQYASNDV 73 Query: 68 ETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI-NDADIDFYIS 126 +TQ+SQIENMI+ G +LVI G L V+ +AK++GI V+AYDR+I N + +Y + Sbjct: 74 QTQVSQIENMISNGCKLLVIASIEGDSLGTVLAQAKKKGISVIAYDRLIMNSDAVSYYAT 133 Query: 127 FDNEKVGELQAKALVDIVP----QG--NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGK 180 FDN VG Q + + + + +G N + G P DNNA+ F G M VLKPYVD G Sbjct: 134 FDNYMVGTKQGEYIKEKLNLETAKGPFNLEIFTGDPGDNNARFFYGGAMDVLKPYVDGGV 193 Query: 181 IKVVG------DQWVDGWLPENALKIMENALTAN---NNKIDAVVASNDATAGGAIQALS 231 + V GW E A M+ + + K+DAV+ SND+TA G AL+ Sbjct: 194 LVVKSGSVAFEKVATAGWSTETAQNRMDAIIASYYADGTKLDAVLCSNDSTALGVTNALT 253 Query: 232 AQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADT 291 A ++GQD D+A +K + G Q+M+++K LA+ ++ + G E + Sbjct: 254 ASYKGEWPIVTGQDCDIANVKNMLDGKQSMSIFKDTRTLASQVVKMVDAIMKGGEAPVND 313 Query: 292 T--LNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 T +NG VPS L P+ + N K+ +I G++ E +L Sbjct: 314 TKSYDNGNGIVPSYLCEPVFADATNYKELLIDSGYYTEDQL 354 >UniRef50_B0NEL2 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NEL2_EUBSP Length = 321 Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 68/336 (20%), Positives = 137/336 (40%), Gaps = 30/336 (8%) Query: 1 MKIKNILLTLCTSLLLTNV-----------AAHAKEVKIGMAIDDLRLERWQKDRDIFVK 49 MK + + + L +++++ V + ++ IG + + D Sbjct: 1 MKKRFLGVLLVGAMVMSTVLTGCGNKKESKSGGEDKITIGFSSKTNSDTFVKAIADAAED 60 Query: 50 KAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKV 109 A+ G + + A G+ Q++ E +I + VD L++IP + + + VV A + I + Sbjct: 61 AAKEQGVDLIMADAEGDVNKQINDCETLIAQQVDALIVIPQDVEGSAPVVSMANEADIPI 120 Query: 110 LAYDRMINDADIDFYISFDNEKVGELQAKALVDIVPQG-NYFLMGGSPVDNNAKLFRAGQ 168 + + I D + ++ +++ GE+ D V G ++ G + AG Sbjct: 121 IICNGDIADKNYTAFVGCTDQESGEILGTWFNDNVEHGSQICIIEGPMGQSGQVGRYAGF 180 Query: 169 MKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQ 228 +V +V+ Q W + A+ + E+ LT +K+ A+V ND A GA+ Sbjct: 181 EEV----GMLDNFEVLSCQTA-NWKRDEAMALAEDWLTTYGDKLKAIVCENDDMAMGALS 235 Query: 229 ALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPK 288 A A G + V I G D I+ + G ++V + A E+A+++ NG++ + Sbjct: 236 ACKAAGRTD-VVIGGVDGLEDAIQAVKDGELGVSVLQDSAGQGEGAVEVALQIINGEDYQ 294 Query: 289 ADTTLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGF 324 DT + + +N+ + F Sbjct: 295 KDT------------RIPFHAITSDNVDAYLEGGAF 318 >UniRef50_Q2KAX1 Probable sugar ABC transporter, substrate-binding protein n=3 Tax=Rhizobium etli RepID=Q2KAX1_RHIEC Length = 307 Score = 253 bits (646), Expect = 9e-66, Method: Composition-based stats. Identities = 74/326 (22%), Positives = 136/326 (41%), Gaps = 24/326 (7%) Query: 1 MKIKNILLTLCTSLLLT---NVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAE-SLGA 56 MK + L C L T A A + +G A ++ F++ ++ Sbjct: 1 MKAISKLALACAISLATISTGSAFAADKFVVGYANMADTDVFVMARKNAFIEASKSDPAV 60 Query: 57 KVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI 116 +V AN + Q+ QI+N I + V+ +V++P + Q + V++A Q GI V+A Sbjct: 61 EVNFSDANNDVSKQLDQIDNFIAQKVNAIVVVPVDYQGIVPGVEKANQAGIPVIALGIQS 120 Query: 117 NDADIDFYISFDNEKVGELQAKALVDIVPQG-NYFLMGGSPVDNNAKLFRAGQMKVLKPY 175 ++ N G LQ + + + +P+G + G+P ++ + + G L Sbjct: 121 AGGKYT-FVGSKNIDAGRLQGEYMKEHLPKGAKILYLEGTPGLSHTQERKKGFEDALGR- 178 Query: 176 VDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGL 235 + + + +K+ E+ + + K DA+VA+ND A GA++AL Sbjct: 179 ---SDVTTLASLSA-NYDRAEGMKVTEDWIQSFP-KFDAIVAANDQMALGALEALQGADR 233 Query: 236 SGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNN 295 V ISG D + I AGT + T+++ A A E+ L G++ A+ Sbjct: 234 LKGVMISGVDGTADALNAIKAGTMSQTIFQDAAGQAKAAFEVVEGLKKGEDAPAE----- 288 Query: 296 GLKDVPSRLLTPIDVNKNNIKDTVIK 321 +L+ + K+N+ K Sbjct: 289 -------KLVPFASITKDNVGQYAKK 307 >UniRef50_B1G1G9 Monosaccharide-transporting ATPase n=1 Tax=Burkholderia graminis C4D1M RepID=B1G1G9_9BURK Length = 369 Score = 253 bits (646), Expect = 9e-66, Method: Composition-based stats. Identities = 73/323 (22%), Positives = 129/323 (39%), Gaps = 30/323 (9%) Query: 19 VAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMI 78 A + KIG ++ L + + K A+ G + +ANG+ + Q++ N++ Sbjct: 61 ANAAGGKTKIGFSVSTLNNAFFVGLKAGVEKGAKEQGFDLVQTNANGDAQQQVNDAINLL 120 Query: 79 NRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAK 138 ++GV LV+ P + + + V++A I V DR + + +++ DN +G+ AK Sbjct: 121 SQGVTALVLNPIDSKAIIPAVEKANAMNIPVFTLDRGSDGGKVTSFVASDNVALGQTAAK 180 Query: 139 ALVDIV------PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGW 192 + D + +GN + G A G + Y D IKVV Q + Sbjct: 181 WIADQLTKRYGSAKGNVVDLIGLVGTTAATDREKGFSDEIAKYPD---IKVVARQEGA-F 236 Query: 193 LPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGL------SGKVAISGQDA 246 E +L M N L +IDAV +ND GA +A+ G + + G D Sbjct: 237 DQEKSLNAMTNILQKYP-QIDAVFGANDDNTVGAEKAIDNAGRYKPLDDKQHILVIGADG 295 Query: 247 DLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLT 306 + I AG Q T+ + +A + + + ++ A+ Sbjct: 296 TAQALSAIRAGKQDATISQNPIQMAAKSLQFVADYTAKKDVPANYAW------------P 343 Query: 307 PIDVNKNNIK-DTVIKDGFHKES 328 + ++K+NI D K G E Sbjct: 344 TLLIDKSNIDSDATKKYGLWSEE 366 >UniRef50_A0QT42 ABC transporter n=2 Tax=Actinomycetales RepID=A0QT42_MYCS2 Length = 365 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 122/328 (37%), Positives = 180/328 (54%), Gaps = 21/328 (6%) Query: 24 KEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVD 83 + +G+A+ ERW D V + ++LG +Q + + Q+SQIENMI +GV Sbjct: 37 AKGTVGIAMPTKSSERWVADGQNMVDQFKALGYDTDLQYGDDVVQNQVSQIENMITKGVK 96 Query: 84 VLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIND-ADIDFYISFDNEKVGELQAKALVD 142 +LVI P +G L+N ++ A I V++YDR+I ++D+Y +FDN KVG LQA +VD Sbjct: 97 LLVIAPIDGSSLTNTLQHAADLKIPVISYDRLIKGTPNVDYYATFDNTKVGVLQANYIVD 156 Query: 143 IV----PQG--NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDG----- 191 + +G N L GSP DNNA F G M VL+PY+DSGK+ V Q Sbjct: 157 TLGVADGKGPFNLELFAGSPDDNNATYFFQGAMSVLQPYIDSGKLVVKSGQTTFDQIATL 216 Query: 192 -WLPENALKIMENALTANN--NKIDAVVASNDATAGGAIQALSAQGL----SGKVAISGQ 244 W A M+N L+ ++DAV++ D + G I AL + G ++GQ Sbjct: 217 RWDGGLAQSRMDNLLSQAYTSGRVDAVLSPYDGISRGVISALKSAGYGNAAKPLPIVTGQ 276 Query: 245 DADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKAD--TTLNNGLKDVPS 302 DA+LA +K I AG QT TV+K LA A + A + G P+ + T +NG+K VPS Sbjct: 277 DAELASVKSIVAGEQTQTVFKDTRELAKAAVQEADAVLTGGTPQVNDTETYDNGVKVVPS 336 Query: 303 RLLTPIDVNKNNIKDTVIKDGFHKESEL 330 LL P+ V+K+N K +I G++ E+++ Sbjct: 337 YLLDPVSVDKSNYKKVLIDSGYYTETQV 364 >UniRef50_D1PSG1 Sugar ABC transporter, periplasmic sugar-binding protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSG1_9FIRM Length = 398 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 112/390 (28%), Positives = 184/390 (47%), Gaps = 63/390 (16%) Query: 1 MKIKNILLTLCTSLL--LTNVAAHAKEV---------------------------KIGMA 31 MK + + L +++ L ++ K+G++ Sbjct: 1 MKKRILAAALSATMIVSLAGCSSGGTSSTAESSSEAATTESTAETGSEGGSTGGQKVGLS 60 Query: 32 IDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYN 91 + LERW +D ++ + G + + ++ + Q+S I+NMI GVD+LV+ + Sbjct: 61 MPTQSLERWNRDGSYLDQQFKDAGYETVITYSDNDTNRQVSDIQNMIADGVDLLVVAAID 120 Query: 92 GQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIV------P 145 G+ L+ V+ EA + GI V+AYDR+I + + +Y+SFDN VG LQ + +VD + Sbjct: 121 GEALNTVMNEAGEAGIPVIAYDRLIMNDNASYYVSFDNYTVGTLQGQYIVDTLDLDNAAG 180 Query: 146 QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQW------VDGWLPENALK 199 N + G P DNNA F G M VL+PY+DSGK+ VV Q W + A++ Sbjct: 181 PFNMEITAGDPADNNATYFYQGAMDVLQPYIDSGKLVVVSGQTDFDTVATAQWDSQTAME 240 Query: 200 IMENALTAN---NNKIDAVVASNDATAGGAIQALSA--QGLSGKVAISGQDADLAGIKRI 254 +N L + ++D + SND+TA G QA+ + G S + I+GQD D A +K I Sbjct: 241 RAQNVLASYYADGTQVDVWLCSNDSTALGVSQAIQSDYAG-SNQPIITGQDGDEANLKNI 299 Query: 255 AAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGL----------------K 298 G Q+MTVYK ++ A ++ + NG N+G Sbjct: 300 VDGLQSMTVYKAVSNEAVVTLDLGKAILNGDTIDESLITNSGWDFDCSYDTESYFTSDGN 359 Query: 299 DVPSRLLTPIDVNKNNIKDTVIKDGFHKES 328 + PS LL P V K+N+ + ++ G++ + Sbjct: 360 NCPSFLLVPDVVTKDNMTEKLVDTGYYTQD 389 >UniRef50_A4XMF2 Monosaccharide-transporting ATPase n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XMF2_CALS8 Length = 339 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 121/285 (42%), Positives = 181/285 (63%), Gaps = 1/285 (0%) Query: 22 HAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRG 81 +V IG A+ L+ ERW KDRDI + KA G +V +AN N+ Q++Q++ ++++ Sbjct: 53 KPSKVVIGFAMGTLKEERWFKDRDILIAKAHEKGYEVEWVNANENDVEQINQVKFLLSKN 112 Query: 82 VDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALV 141 +++L+I+P N + S+ V AK+ GIKV++YDR++ ++DID Y+SF+N KVGEL AK L+ Sbjct: 113 INILIIVPNNYEKCSSAVNLAKKRGIKVISYDRLVRNSDIDVYVSFNNYKVGELMAKWLI 172 Query: 142 DIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIM 201 VP+GNY + G P D N ++ + G KVL P++ +I + +++ W E A + Sbjct: 173 KKVPRGNYAFLLGDPGDYNVQMIKEGYHKVLDPFIKKKQINIALEKYCYNWRKEYAYNYI 232 Query: 202 ENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTM 261 N L N +IDA++ASND+ A GAI ALS + L+G V ++GQDAD++ +RI GTQ M Sbjct: 233 TNLLDQNK-RIDAILASNDSLAEGAIMALSEKRLAGIVPVTGQDADISACQRIIKGTQLM 291 Query: 262 TVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLT 306 TVYKPI L + EI L N + LNNG K+VP+ LT Sbjct: 292 TVYKPIDKLVDLTFEIVDRLINNKSLNPPLMLNNGYKNVPTFFLT 336 >UniRef50_Q8RBP9 Periplasmic sugar-binding proteins n=1 Tax=Thermoanaerobacter tengcongensis RepID=Q8RBP9_THETN Length = 339 Score = 250 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 72/348 (20%), Positives = 135/348 (38%), Gaps = 43/348 (12%) Query: 1 MKIKNILL-----TLCTSLLLTNV------------------AAHAKEVKIGMAIDDLRL 37 MK +I L L SL+ + A+ K+ I + D Sbjct: 1 MKRSSIFLTILVLVLAISLVFSGCSSKQQTPSSSSTQESSQTASSEKKYNIVLITMDSMD 60 Query: 38 ERWQKDRDIFVKKAESLG-AKVFVQSA--NGNEETQMSQIENMINRGVDVLVIIPYNGQV 94 E W + KA+ LG ++ ++ + Q+ +E+ IN+ D ++I P + Sbjct: 61 EHWLAVKAGAEAKAKELGNVQLTFRAPAEKADPNEQVRMMEDAINQKADAILIAPTDQTA 120 Query: 95 LSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMG 153 L+ VV++A GI V+ D + +++ DN K E+ A L +++ +G ++ Sbjct: 121 LTPVVEKAFDAGIPVILIDSPVKTDKYVSFVATDNIKAAEMAADKLGELLGGKGKIAIIS 180 Query: 154 GSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKID 213 P + G LK I+++ Q+ G AL + LTA+ + + Sbjct: 181 AQPGSGTTIMRENGFKDRLKEKY--PDIQIITTQYSMG-DKNRALNQALDILTAHPD-LA 236 Query: 214 AVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANT 273 +N+ + G A+ + L+GKV + G D A I I ++ + ++ Sbjct: 237 GFYGTNEGSTIGIAMAIKQKDLAGKVKVVGFDISQATINAIKENYIQASMVQNPYMMGYK 296 Query: 274 AAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTVIK 321 EIAV+ G+E + K+N+ + V + Sbjct: 297 GVEIAVDKLQGKEVPKRVDTG------------VTVMTKDNVDEVVKE 332 >UniRef50_B4DBL5 Monosaccharide-transporting ATPase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBL5_9BACT Length = 328 Score = 250 bits (640), Expect = 5e-65, Method: Composition-based stats. Identities = 64/320 (20%), Positives = 121/320 (37%), Gaps = 24/320 (7%) Query: 1 MKIKNILLTLCTSLLLTNV---------------AAHAKEVKIGMAIDDLRLERWQKDRD 45 MK + + C + A + IG+++ L ++ D Sbjct: 1 MKHRLFIALACLLTVFAGCNKSENASTSTDTQPPTGSASKGTIGVSLLTLDNPFFKVIGD 60 Query: 46 IFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQE 105 V + + G V S + + Q +QI++ I + V +V+ P + + + V++EA Sbjct: 61 NIVSEGKKRGYDAVVVSGDKDVAKQSNQIKDFIVKKVSAIVLSPCDSKSIVPVIQEANAA 120 Query: 106 GIKVLAYDRMI--NDADIDFYISFDNEKVGELQAKALVDIVPQ--GNYFLMGGSPVDNNA 161 GI V D I I+ DN G+ AKA+++ + + G ++ + Sbjct: 121 GIPVFTVDIPCHEPGVKIATQIATDNYGGGKEAAKAMIEALGEAGGKIAIL-HFKQAESC 179 Query: 162 KLFRAGQMKVLKPYVDSG--KIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASN 219 +L G +++ + G K+ +V + G + K E+ L AN + + + A N Sbjct: 180 QLRVKGFREIIDAHNAEGKSKVDIVAELESGG-AKDQGYKAAEDTLQANPD-LHGIFAIN 237 Query: 220 DATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAV 279 D A GA AL G + +V I G D G + I G + + + + Sbjct: 238 DPAALGARAALEKAGKTDQVVIVGFDGQPEGKQAIKEGKIYADPIQFPDKMGAQIVDAII 297 Query: 280 ELGNGQEPKADTTLNNGLKD 299 + G+ + L Sbjct: 298 QQSKGETLPPQMLIPTSLYK 317 >UniRef50_A5FZZ2 Monosaccharide-transporting ATPase n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FZZ2_ACICJ Length = 369 Score = 250 bits (640), Expect = 5e-65, Method: Composition-based stats. Identities = 128/353 (36%), Positives = 194/353 (54%), Gaps = 23/353 (6%) Query: 1 MKIK--NILLTLCTSLLLTNVAAH--------------AKEVKIGMAIDDLRLERWQKDR 44 MKI I+ ++ + A +K+ I + + R+++ Sbjct: 1 MKIAFPTIIAASALAVGAFGLTAAHAQSVTQPSVHQISSKKTTIAFLLPENSSPRYEQVD 60 Query: 45 D---IFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKE 101 I + A AK+ V +AN + +TQ++Q E+ I+ G DVLV+ P +G+ + +V Sbjct: 61 RPWFIKMAHAADPNAKLIVSNANSSPDTQLNQAESAISNGADVLVVDPVDGKAGAAIVNY 120 Query: 102 AKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNN 160 A + +KV++YDR+I D+ D+Y+SFDN KVGELQ + + P G+ ++ G+P D N Sbjct: 121 AARNHVKVISYDRLIQDSKPDYYVSFDNTKVGELQGEYIAKHTKPGGSVMMINGAPTDPN 180 Query: 161 AKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASND 220 A FR G M VL P SGK+ + W P+NA + + ALT +NK++AV+A+ND Sbjct: 181 AFDFRKGAMNVLGPLFKSGKLHLAYSVMTPDWSPQNAFEESQQALTRLHNKVNAVLAAND 240 Query: 221 ATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVE 280 TA G I+AL A GL+GKV ++GQDA G+ I G Q+MTV+K + A AAE+AV Sbjct: 241 GTASGVIRALQAVGLAGKVPVTGQDATNGGLTFILEGLQSMTVFKYVPEEAAAAAELAVA 300 Query: 281 LGNGQEPKA---DTTLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 + +P A + NN + DVPS LL P+ V K NI +VIK G+ + Sbjct: 301 VATDTKPPAGLLNGKTNNKMIDVPSVLLKPLVVTKANIAGSVIKSGYTTWKAI 353 >UniRef50_P25548 Multiple sugar-binding periplasmic receptor chvE n=76 Tax=Bacteria RepID=CHVE_AGRT5 Length = 354 Score = 250 bits (639), Expect = 5e-65, Method: Composition-based stats. Identities = 132/353 (37%), Positives = 190/353 (53%), Gaps = 23/353 (6%) Query: 1 MKIKNILLTLCTSLLLTNVAAH--AKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKV 58 MK L+ C + A + +G+A+ RW D + VK+ + G K Sbjct: 1 MKSIISLMAACAIGAASFAAPAFAQDKGSVGIAMPTKSSARWIDDGNNIVKQLQEAGYKT 60 Query: 59 FVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI-N 117 +Q A+ + Q+SQIENM+ +GV VLVI +G LS+V+K+A ++GIKV+AYDR+I N Sbjct: 61 DLQYADDDIPNQLSQIENMVTKGVKVLVIASIDGTTLSDVLKQAGEQGIKVIAYDRLIRN 120 Query: 118 DADIDFYISFDNEKVGELQAKALVDIV----PQG--NYFLMGGSPVDNNAKLFRAGQMKV 171 D+ +Y +FDN +VG LQA ++ D + +G N L GGSP DNNA F G M V Sbjct: 121 SGDVSYYATFDNFQVGVLQATSITDKLGLKDGKGPFNIELFGGSPDDNNAFFFYDGAMSV 180 Query: 172 LKPYVDSGKIKVVGDQWVDG------WLPENALKIMENALTANNNK--IDAVVASNDATA 223 LKPY+DSGK+ V Q W P A M+N L+A +DAV++ D + Sbjct: 181 LKPYIDSGKLVVKSGQMGMDKVGTLRWDPATAQARMDNLLSAYYTDAKVDAVLSPYDGLS 240 Query: 224 GGAIQALSAQGLSGK----VAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAV 279 G I +L G K +SGQDA++ +K I AG Q T++K LA + Sbjct: 241 IGIISSLKGVGYGTKDQPLPVVSGQDAEVPSVKSIIAGEQYSTIFKDTRELAKVTVNMVN 300 Query: 280 ELGNGQEPKAD--TTLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 + G+EP+ + T NG+K VPS LL P+ V K N K ++ G++KE +L Sbjct: 301 AVMEGKEPEVNDTKTYENGVKVVPSYLLKPVAVTKENYKQVLVDGGYYKEDQL 353 >UniRef50_C1DLC8 ABC transporter substrate binding protein n=3 Tax=Gammaproteobacteria RepID=C1DLC8_AZOVD Length = 315 Score = 249 bits (638), Expect = 7e-65, Method: Composition-based stats. Identities = 67/315 (21%), Positives = 138/315 (43%), Gaps = 21/315 (6%) Query: 4 KNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESL--GAKVFVQ 61 + + T L L A A ++++G+++ ++A + G + V+ Sbjct: 12 RTRAVLFATVLCLAGSTALA-DLRLGVSVGQFDN-YIAYLVRAMQERARQVPGGVTLQVE 69 Query: 62 SANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIND--- 118 + + Q+ Q+E+ I + VD +++ P + + + A + GI ++ + Sbjct: 70 DSGSDVVRQLGQVESFIAQQVDAIIVNPADTAATGGITERATRAGIPLVYLNSRPEVREF 129 Query: 119 ADIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVD 177 ++ D ++G++Q + L + + +G+ ++ G ++ + AG VL Y Sbjct: 130 PAGVVFVGTDERRLGQMQMEYLAEKMGGKGDLAILLGRLAHDDTRKRTAGVKDVLARYP- 188 Query: 178 SGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSG 237 +I+VV +Q D W + L + N L++ + DAVVA+ND GA AL G Sbjct: 189 --QIRVVEEQSGD-WQRDKGLDLTNNWLSS-GREFDAVVANNDEMGIGAAMALRQAGRR- 243 Query: 238 KVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGL 297 +V++ G D G+ IA G +T+ + + A ++A+ L + G Sbjct: 244 EVSVGGIDGTPDGLAAIARGQLAVTLLRDPVAMGEEAVDVALRLVRKDVVQ-------GD 296 Query: 298 KDVPSRLLTPIDVNK 312 +P L+TP + + Sbjct: 297 VWIPVHLITPDNHTQ 311 >UniRef50_B9XK02 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=bacterium Ellin514 RepID=B9XK02_9BACT Length = 330 Score = 249 bits (638), Expect = 8e-65, Method: Composition-based stats. Identities = 63/326 (19%), Positives = 125/326 (38%), Gaps = 18/326 (5%) Query: 3 IKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESL-----GAK 57 ++N+L + A K I + E WQ +K L Sbjct: 5 LRNLLTCALFLSSICLSCAADKSYTIAVIPKGTTHEYWQCIHAGAIKAQRELQEKGIKVD 64 Query: 58 VFVQSA--NGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRM 115 + + + + Q+ +EN + R V +V+ P + Q + V A + I V+ +D Sbjct: 65 LIWKGPLREDDRDQQIQVVENFMTRRVSGMVLAPLDNQAMVAPVNNAIRAKIPVVIFDSA 124 Query: 116 INDADIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKP 174 + +++ DN K G+L A+ + ++ +GN L+ + + + AG M LK Sbjct: 125 LKTDKYVSFVATDNYKGGQLAAERMGQLLEGKGNVILLRYAVGSASTEEREAGFMDTLKS 184 Query: 175 YVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQG 234 IKV+ G E A + +N L ++++ + + +AL G Sbjct: 185 KF--PNIKVISSDQHAGATRETAYQASQNLLNRFGHEVNGIFCPCEPPTVAMAKALRDIG 242 Query: 235 LS-GKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTL 293 + GKV + G DA + + G V + + V+ G++ + Sbjct: 243 KAGGKVKMVGFDAGSQSVIDLKNGDVQGLVVQNPLRMGYLGVITMVQHLQGEKVEKR--- 299 Query: 294 NNGLKDVPSRLLTPIDVNKNNIKDTV 319 D +++TP ++ + IK+ + Sbjct: 300 ----IDTGVQIVTPENMEQAGIKELI 321 >UniRef50_B9KA11 Ribose ABC transporter, periplasmic ribose-binding protein n=7 Tax=Bacteria RepID=B9KA11_THENN Length = 326 Score = 249 bits (637), Expect = 8e-65, Method: Composition-based stats. Identities = 74/332 (22%), Positives = 125/332 (37%), Gaps = 31/332 (9%) Query: 1 MKIKNILLTLCTSL---LLTNVAAHAKEVK--IGMAIDDLRLERWQKDRDIFVKKAESLG 55 MK ++ + L T +A ++ K + + I L + + ++AE LG Sbjct: 4 MKKSLFVVLVLVGLLLVSFTGLAQEQQKPKGKMAIVISTLNNPWFVVLAETAKQRAEQLG 63 Query: 56 AKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRM 115 + + + + + + + +I G D ++ P + VK AK+ GI V DR Sbjct: 64 YEATIFDSQNDTAKESAHFDAIIAAGYDAIIFNPTDADGSIANVKRAKEAGIPVFCVDRG 123 Query: 116 INDADID-FYISFDNEKVGELQAKALVDIVPQG-------NYFLMGGSPVDNNAKLFRAG 167 IN + I DN G L + V + + Y + G G Sbjct: 124 INARGLAVAQIYSDNYYGGVLMGEYFVKFLKEKYPDAKEIPYAELLGILSAQPTWDRSNG 183 Query: 168 QMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAI 227 V+ Y + K+V Q + + + A K+ E L A+ +I A+ NDA A GA+ Sbjct: 184 FHSVVDQYPE---FKMVAQQSAE-FDRDTAYKVTEQILQAHP-EIKAIWCGNDAMALGAM 238 Query: 228 QALSAQGLSGKVAISGQDADLAGIKRIAAGT-QTMTVYKPITLLANTAAEIAVELGNGQE 286 +A A G + + I G D I I G T+ + L+A A E A + G+ Sbjct: 239 KACEAAGRTD-IYIFGFDGAEDVINAIKEGKQIVATIMQFPKLMARLAVEWADQYLRGER 297 Query: 287 PKADTTLNNGLKDVPSRLLTPIDVNKNNIKDT 318 + +T V + NI Sbjct: 298 SFPEIVP-----------VTVELVTRENIDKY 318 >UniRef50_A8GD77 Periplasmic binding protein/LacI transcriptional regulator n=11 Tax=Proteobacteria RepID=A8GD77_SERP5 Length = 305 Score = 249 bits (637), Expect = 9e-65, Method: Composition-based stats. Identities = 82/318 (25%), Positives = 141/318 (44%), Gaps = 21/318 (6%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFV 60 MK ++ + T+V A IG+++ R K+A++ G V Sbjct: 1 MKYLKRIVLVAALGCSTSVLAE----TIGVSMAYFDQNFLTIIRHSIDKEAKARGISVQF 56 Query: 61 QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD 120 + A G+ Q Q++N I+ GVD +++ P N + K + GI ++ +R D+ Sbjct: 57 EDARGDVGRQADQVQNFISAGVDAIIVDPVNSAGTPAITKMVTKAGIPLVYVNRTPGDSK 116 Query: 121 IDF---YISFDNEKVGELQAKALVDIVP-QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYV 176 + ++ D ++ G LQ + L + QGN +M G+ D A +V+ Y Sbjct: 117 LPAGVVFVGSDEKQSGTLQMEELARLANYQGNVAVMIGNLTDAGALQRTKDVEQVVAKYP 176 Query: 177 DSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS 236 K+KVV Q + + +M N +T N ID V A+ND A GAI AL G Sbjct: 177 ---KMKVVQKQSA-NYSRSEGMDLMLNWIT-NGESIDIVAANNDEMAIGAIMALQQAGKQ 231 Query: 237 G-KVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNN 295 G KV + G DA G+K +++G +TV++ + ++A + G++ Sbjct: 232 GSKVLVGGIDATPDGLKALSSGKMQVTVFQDAVGQGKASVDVAQRMIKGEKLDP------ 285 Query: 296 GLKDVPSRLLTPIDVNKN 313 +P L+TP ++ K Sbjct: 286 -YYWIPFELVTPANMQKY 302 >UniRef50_A9CF36 ABC transporter, substrate binding protein (Sugar) n=4 Tax=cellular organisms RepID=A9CF36_AGRT5 Length = 309 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 82/329 (24%), Positives = 145/329 (44%), Gaps = 27/329 (8%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESL-GAKVF 59 MK + +L AAHA+ +G+++ R+ + ++ L G + Sbjct: 1 MKK---FIIGAAMSVLLGTAAHAE--TVGVSMALFDDNFLTVLRNGMLDYSKELKGVTLQ 55 Query: 60 VQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIND- 118 V+ A + Q SQI+N I VD +++ P + + + K A I ++ +R + Sbjct: 56 VEDAQNDVAKQQSQIQNFIASKVDAIIVNPVDTDATAAMSKLAADAKIPLVYVNRQPVNV 115 Query: 119 ---ADIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKP 174 D +++ D G L+AK + ++ +GN +M G + A++ VLK Sbjct: 116 DSLPDGQAFVASDETVAGTLEAKEVCRLLGGKGNAVIMMGELSNQAARMRTQSAKDVLKT 175 Query: 175 YVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQG 234 + I VV +Q W ++ N L++ + +AV+A+ND A GAIQAL A G Sbjct: 176 -DECKGISVVEEQTA-NWQRTQGSDLVTNWLSS-GIEFNAVIANNDEMAIGAIQALKAAG 232 Query: 235 LSGKVAIS-GQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTL 293 K + G DA + + AG +TV++ A + A++L G + + Sbjct: 233 KDMKSYVVAGVDATQDALAAMQAGDLDVTVFQDAAGQGKGALDAALKLVKGDKIEKKVY- 291 Query: 294 NNGLKDVPSRLLTPIDVNKNNIKDTVIKD 322 +P +L+TP N+KD V K+ Sbjct: 292 ------IPFQLVTP-----ENVKDYVAKN 309 >UniRef50_C5VEK6 D-ribose-binding periplasmic protein n=3 Tax=Corynebacterium matruchotii RepID=C5VEK6_9CORY Length = 325 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 83/338 (24%), Positives = 138/338 (40%), Gaps = 40/338 (11%) Query: 2 KIKNILLTLCTSLLLTN-------------------VAAHAKEVKIGMAIDDLRLERWQK 42 K++ L + ++ LL A I A+ + + Sbjct: 5 KLRKTLAVVASATLLCAGLAACNRDSGGNNATGDHTTTGSASAKTITFALSTQANPFFVQ 64 Query: 43 DRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEA 102 R+ KKA+ LG + Q A + TQ +Q+ N G V++I P + ++ V++ Sbjct: 65 MRESAQKKADELGLAINFQDAADDSATQSNQLANAAASGTGVVIINPTDSDAMAPAVQQL 124 Query: 103 KQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNA 161 E I V+A DR +N+A++ YI+ DNE G+ AK L D + +G ++ G + + Sbjct: 125 VDEKIPVVAVDRAVNNANVASYIASDNETGGKQAAKVLSDAINGEGEILVLQGKTGSSAS 184 Query: 162 KLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDA 221 + G + LK D+ IKVV Q + + L + N L A+ N + A+ A ND Sbjct: 185 RERGKGFDEGLK---DNPNIKVVAKQTAE-FERAKGLDVTTNLLQAHPN-VKAIFAENDE 239 Query: 222 TAGGAIQAL-SAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVE 280 A GAI+AL S G V + G D +K I G ++ + +A A A + Sbjct: 240 MALGAIEALGSKAGKD--VKVIGFDGAEDALKAIKDGRMYASIAQQPVKMAEQAVIEASK 297 Query: 281 LGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDT 318 L G+ + + K N+ Sbjct: 298 LLKGETATKKMQ------------VEVVAATKENVDKF 323 >UniRef50_Q1Z3C1 Putative sugar ABC transporter, periplasmic sugar-binding n=4 Tax=Vibrionaceae RepID=Q1Z3C1_PHOPR Length = 355 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 72/321 (22%), Positives = 125/321 (38%), Gaps = 20/321 (6%) Query: 6 ILLTLCTSLLLTNVAAHAKEVK-IGMAIDDLRLERWQKDRDIFVK-KAESLGAKVFVQSA 63 + +T +L+ V IG+AI + +D A+ ++ A Sbjct: 52 LFITGLMALVACGGEKADSNVTRIGVAIPNFDDTFLVNMKDSMSAYAAKQDNLELIFVDA 111 Query: 64 NGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIND-ADID 122 + Q+ QI+N I + VD ++++P N + + + GI+++ +R D Sbjct: 112 KEDTVKQLGQIQNFIIQQVDGIILVPVNTDATQPMTDDILKAGIELVYLNRRPTYLPDGV 171 Query: 123 FYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIK 182 Y+ + + GE QAK GN ++ G A L G K + I+ Sbjct: 172 AYVGSEELRFGEEQAKYAASHSDGGNIGIIMGMMTVEAAILRTQGVEDFFKEKPEYNIIR 231 Query: 183 VVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAIS 242 + W + +MEN + + +K+D ++++ND A GAIQAL A G + Sbjct: 232 ----KQTALWQRSQGMVVMENWINS-GDKLDIIISNNDDMALGAIQALRAAGKLDDTIVI 286 Query: 243 GQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPS 302 G DA G+ I G TV++ A A + A+ N T Sbjct: 287 GVDATPDGLMAIKNGALDATVFQDGRSQARGAIDAALSGINKTPRDKITW---------- 336 Query: 303 RLLTPIDVNKNNIKDTVIKDG 323 + V K+N+ + K G Sbjct: 337 --IPAELVTKDNLAEFEAKQG 355 >UniRef50_A8RW63 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RW63_9CLOT Length = 375 Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 67/300 (22%), Positives = 125/300 (41%), Gaps = 23/300 (7%) Query: 24 KEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVD 83 + IG + + + +AE G K+ V A N Q+S +E++I + +D Sbjct: 87 SDYLIGYSQLANTGTYRIAETNSMKDEAEKRGFKLIVTDAQDNTAKQVSDVEDLIAQNID 146 Query: 84 VLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDA---DIDFYISFDNEKVGELQAKAL 140 +L++ P + L ++ AK+ + V+ DR+ D YI+ D G+ + L Sbjct: 147 LLILSPREFEGLETALQTAKENSVPVILVDRLAKGEAGVDYVTYIATDFVWEGQAAGEWL 206 Query: 141 VDIVPQ-GNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALK 199 D N + G+ ++A+ G V+ + +K++ Q + K Sbjct: 207 KDKTGGTCNIIELTGTVGSSSAQDRATGFAGVVDQ---NEGMKIIASQ-TGNFERSEGQK 262 Query: 200 IMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSG--KVAISGQDADLAGIKRIAAG 257 +MEN L A+ ++DAV ND A GA+QA+ A G + + G D ++ K + AG Sbjct: 263 VMENLLQAHGGEVDAVFCHNDQMALGAVQAIKAAGYKPNEDILVIGIDGEMDSFKSVIAG 322 Query: 258 TQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKD 317 + TV + + ++ GQE T ++ + V+ N ++ Sbjct: 323 EMSATVVSSP-MYGPITFDTVEKILAGQEVPEQT------------IMEGVVVDAGNAQE 369 >UniRef50_C9MXF0 Putative uncharacterized protein n=1 Tax=Leptotrichia hofstadii F0254 RepID=C9MXF0_9FUSO Length = 328 Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 74/338 (21%), Positives = 136/338 (40%), Gaps = 27/338 (7%) Query: 1 MKIKNILLTLCTSLLLTN------------VAAHAKEVKIGMAIDDLRLERWQKDRDIFV 48 MK + L + ++L A ++KI + + E W+ Sbjct: 1 MKKLLLFLVVFAAVLSCGKSEDKKDAGAGKSANSGDKIKIELVSKGYQHEFWRSVEAGAK 60 Query: 49 KKAESLGAKVFVQSANGNEE--TQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEG 106 K E LG +V E Q+ +EN IN+ V L I + L+ V K+A Sbjct: 61 KAGEELGVEVNFIGPEKETEIGKQVGMVENAINKKVSALGIAALDPDALAVVAKKAMDAK 120 Query: 107 IKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFR 165 I V+ +D + +I+ DN+ G + + L ++ +G ++ +P A Sbjct: 121 IPVVTFDSNVKGDITSSFIATDNKVAGAMAGEQLAKLINGKGKVAIVSHNPGTTTAIERE 180 Query: 166 AGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGG 225 AG + L Y D IK++ Q+ DG AL I + + AN + I + +N+ + G Sbjct: 181 AGFREALAKYPD---IKILNTQFSDG-DKSKALAITLDIINANPD-IAGIYGTNEPSIFG 235 Query: 226 AIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQ 285 + + +GL+GKV + G D+ K + G + V + + + +L G+ Sbjct: 236 IAKGVEEKGLTGKVVLVGIDSSEDLAKFLEKGVISGLVIQDPYNMGYQTVQQLYKLSKGE 295 Query: 286 EPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDG 323 + + D + L+T ++N +I + G Sbjct: 296 KVEKR-------IDTGAILVTKENINNPDITKKMFPFG 326 >UniRef50_UPI000185D1D6 putative DNA-binding response regulator/sensor histidine kinase n=1 Tax=Capnocytophaga sputigena ATCC 33612 RepID=UPI000185D1D6 Length = 903 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 70/319 (21%), Positives = 130/319 (40%), Gaps = 27/319 (8%) Query: 2 KIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAE--SLGAKVF 59 + + L L IG++ L Q + ++ A+V Sbjct: 5 RYHILFLYFALFACLACQRERNPRYVIGVSQCSEDL-WRQTMNEELKREVALYQADAEVL 63 Query: 60 VQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDA 119 ++S + Q++ IE I + VDVLV+ P + + V+++A Q+GI V+ DR I Sbjct: 64 IRSVKDDTPKQIADIEWFIEQKVDVLVVSPNESEACTPVIEKAYQQGIPVILVDRKIATE 123 Query: 120 DIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDS 178 Y+ +N ++G+ + ++ +GN + G+ + G + LK ++ Sbjct: 124 SYTAYVGANNYQIGKEAGLYAIGVLKGKGNIAEVRGTKGSTSDAERHKGFVDALK---NA 180 Query: 179 GKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGK 238 ++++V + W +L +A M+ + ID V A ND A G +A GK Sbjct: 181 PEVQIVAETW-GNFLQADAKTQMQQIFQEHP-HIDLVFAMNDPMAAGTHEAAMQFN--GK 236 Query: 239 VA-ISGQDADLA-GIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNG 296 + I G DA GI+ I Q + P E+A+++ + Q + + LN Sbjct: 237 IPFIIGVDALQQVGIQNIENSVQDASFIYPTG--GEKVIELAMKILHKQPFQRENILNT- 293 Query: 297 LKDVPSRLLTPIDVNKNNI 315 V+K+N+ Sbjct: 294 -----------TVVDKSNV 301 >UniRef50_C7M5H3 Sensor protein n=1 Tax=Capnocytophaga ochracea DSM 7271 RepID=C7M5H3_CAPOD Length = 934 Score = 248 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 69/319 (21%), Positives = 128/319 (40%), Gaps = 27/319 (8%) Query: 2 KIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAE--SLGAKVF 59 K + L L IG++ L Q + ++ ++ Sbjct: 14 KYHILFLYFALFACLACQRERNPRYVIGVSQCSEDL-WRQTMNEELKREVALYQANTELL 72 Query: 60 VQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDA 119 ++S + Q++ IE I + VDVLV+ P + + V+++A Q+GI V+ DR I Sbjct: 73 IRSVKDDTPKQIADIEWFIEQKVDVLVVSPNESEACTPVIEKAYQQGIPVILVDRKIATE 132 Query: 120 DIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDS 178 Y+ +N ++G+ + I+ +GN + G+ + G + L ++ Sbjct: 133 SYTAYVGANNYQIGKEAGHYAIGILKGKGNIAEVRGTKGSTSDAERHKGFVDAL---NNA 189 Query: 179 GKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGK 238 ++++V + W +L +A M+ + N ID V A ND A G +A GK Sbjct: 190 PEVRIVAETW-GNFLKADAKVQMQQLFQQHPN-IDLVFAMNDPMAAGTHEAAMQFN--GK 245 Query: 239 VA-ISGQDA-DLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNG 296 + I G DA GI I Q + P ++A+++ + Q + + LN Sbjct: 246 IPFIIGVDALQQEGISNIENNVQDASFIYPTG--GEKVIDLAMKILHKQPFERENILNTA 303 Query: 297 LKDVPSRLLTPIDVNKNNI 315 V+K+N+ Sbjct: 304 ------------VVDKSNV 310 >UniRef50_D2QME7 Two component transcriptional regulator, AraC family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QME7_9SPHI Length = 940 Score = 247 bits (632), Expect = 3e-64, Method: Composition-based stats. Identities = 66/291 (22%), Positives = 121/291 (41%), Gaps = 12/291 (4%) Query: 14 LLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAE-SLGAKVFVQSANGNEETQMS 72 + A K +IG + E + ++ + + A + Q+S Sbjct: 38 MAGCQSATKTKTYRIGFSQCTGGDEWRKTMLHDMKRELTFHPNYTLLYEDAENSTTRQIS 97 Query: 73 QIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKV 132 QI+ +I++G+D+L++ P + V+++ + GI V+ DR I + YI DN ++ Sbjct: 98 QIQALIDQGIDLLIVSPNEVAPFAKVIEDVFKRGIPVILLDRKIETESYNAYIGGDNVEI 157 Query: 133 GELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDG 191 G L + + + +G + G P + A+ G ++ L+ Y I+VV + Sbjct: 158 GRLAGVFIGNHLKGKGRIVEIWGLPSSSPAQERHRGLLEELRKYP---GIQVVKELN-GQ 213 Query: 192 WLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADL--- 248 W + +++ L + +D V A ND A GA +G+ K+ G DA Sbjct: 214 WERDTVGRVVAAELNTLKD-VDLVFAHNDVMALGAYAVCKQKGIEKKLDFVGIDALPGPN 272 Query: 249 AGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKD 299 AG++ I G + P A E A + G+ K + LN+ D Sbjct: 273 AGMQAITDGILKASFLYPTG--GEEAIETATRILAGKSVKREQVLNSIQID 321 >UniRef50_C5VG88 Sensor protein n=2 Tax=Prevotella RepID=C5VG88_9BACT Length = 878 Score = 247 bits (631), Expect = 5e-64, Method: Composition-based stats. Identities = 76/321 (23%), Positives = 136/321 (42%), Gaps = 24/321 (7%) Query: 1 MKIKNILLTLCTSLLLTNVAAHA-KEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVF 59 M++K L L +LL + + + K+ IG++ + R + + ++ + + + Sbjct: 1 MQMKQWLYILIFTLLFSACSDNNVKKYVIGVSQCSEDIWRDKLNNELVMSTYQHDNVTLK 60 Query: 60 VQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDA 119 SAN N+ Q QIE I GV++L++ P +S+V+ +A GI V+ +DR + Sbjct: 61 FASANDNDRLQKQQIEQFIKEGVNLLIVSPNQIHTISSVIDKAYDAGIPVILFDRKTDSK 120 Query: 120 DIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDS 178 +I DN + G + + +GN + G + A G M LK Y Sbjct: 121 KYTAFIGADNYEAGYEIGNFIGQQLDGKGNIAEICGLQASSPAIERNRGFMDALKDY--- 177 Query: 179 GKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGK 238 IKV+ + D W+ E+ + M++ L+ I V A ND A GA+Q++ + G Sbjct: 178 SGIKVIARKHGD-WVKESGVMAMDSVLSQAKEPIQYVFAQNDRMALGALQSIKKHKVKG- 235 Query: 239 VAISGQDADL---AGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNN 295 + I G DA G++ + G + P ++ ++A+ + + K D L Sbjct: 236 IRIVGIDALPVPGGGMENVRDGNLEASYIYPTR--GDSVMQLALNILEKKPYKRDNYLKG 293 Query: 296 GLKDVPSRLLTPIDVNKNNIK 316 V K N Sbjct: 294 A------------LVTKANAN 302 >UniRef50_Q98J19 Ribose-binding protein of ribose ABC transporter n=4 Tax=Alphaproteobacteria RepID=Q98J19_RHILO Length = 335 Score = 246 bits (630), Expect = 7e-64, Method: Composition-based stats. Identities = 79/322 (24%), Positives = 137/322 (42%), Gaps = 20/322 (6%) Query: 1 MKIKNILL---TLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAK 57 M + LL +L ++ I ++ +L + + +A++ G Sbjct: 21 MNRREFLLTSVAAGAMVLAAPSVFAEDKLTILGSVPNLGFPFFVHMLNEIKAEAQAQGVN 80 Query: 58 VFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIN 117 + + Q + IE + + V+ +VI P + L+ ++EA + G+ V+ DR ++ Sbjct: 81 LTESDGQNSATKQTADIEAALVQKVNAIVISPLDVNALAPAIEEAVKAGVPVVTIDRRVD 140 Query: 118 DA-DIDFYISFDNEKVGELQAKALVDIVPQGNYFL-MGGSPVDNNAKLFRAGQMKVLKPY 175 I ++ DN K GE +A A+V P G + G P A G VL P Sbjct: 141 GVQGILAHVGADNVKGGEAEASAMVAAFPNGAKLFHLQGQPGAGPAIDRNKGVHNVLDPL 200 Query: 176 VDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGL 235 D K +++ +Q + AL + E L AN K DA++ +ND A GA++A +A+ Sbjct: 201 KD--KYQIIFEQTA-NFARAEALSVTEAGLAANG-KPDAIICANDDMALGALEACAARNF 256 Query: 236 SGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNN 295 + V I G DA + + G TV + + TA +IAV + + + Sbjct: 257 TD-VKIYGFDALPEALVAVRDGKLAGTVEQFPGQQSRTAVQIAVAYAKNKTEPKEKLV-- 313 Query: 296 GLKDVPSRLLTPIDVNKNNIKD 317 LLTPI + K+N+ Sbjct: 314 --------LLTPIVIGKDNLDK 327 >UniRef50_B3T6P5 Putative periplasmic binding protein and sugar binding domain of the LacI family protein n=1 Tax=uncultured marine microorganism HF4000_APKG2K17 RepID=B3T6P5_9ZZZZ Length = 302 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 79/323 (24%), Positives = 135/323 (41%), Gaps = 27/323 (8%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAI--DDLRLERWQKDRDIFVKKAESLGAKV 58 MK+ + L ++++ +A + +++ W +KA LG K+ Sbjct: 1 MKLVKLFLASSLAIIIGTLAFAD---TVLLSMKGPGAGNPFWASVERGAREKAAELGVKI 57 Query: 59 FVQSA--NGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI 116 V S + ++Q++Q+E+ I +GV + I + L+ V++ A+ GI V+ D Sbjct: 58 VVLSPPQESDVQSQINQVEDQITKGVTAIAIAVTDPNALAKVIESARSAGIPVVFIDTKG 117 Query: 117 NDADIDFYISFDNEKVGELQAKALVDIVPQG-NYFLMGGSPVDNNAKLFRAGQMKVLKPY 175 + + +I DN+ ++ A + D V +G + ++ G + K G LK Sbjct: 118 INKGVT-FIGTDNKAGAKMAADFICDRVSRGSDVAILQGIITQSTGKARADGAHAGLK-- 174 Query: 176 VDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGL 235 + +V +Q W +MEN LT N K+ AV ASND A GA++AL + Sbjct: 175 --GCGLNIVAEQPA-NWDRAQGRTVMENILTRN-QKLKAVFASNDNMALGAVEALKDADM 230 Query: 236 SGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNN 295 V + G DA+ K I AG T T+ + + E A+EL G+ Sbjct: 231 LNDVIVVGFDANPDAAKSILAGEMTATIAQFSYNMGAYGVEKALELAKGRSLP------- 283 Query: 296 GLKDVPSRLLTPIDVNKNNIKDT 318 P + V K N D Sbjct: 284 -----PVVDTGTLLVTKKNAADF 301 >UniRef50_C6JDF0 Monosaccharide-transporting ATPase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDF0_9FIRM Length = 333 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 61/305 (20%), Positives = 117/305 (38%), Gaps = 20/305 (6%) Query: 16 LTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIE 75 + ++ +G A + + A+ G AN + T ++ IE Sbjct: 40 SSGSKEIGPDLTVGFAQSGNPNPWMVALTESMQQSADEYGVNYIYTDANDDMATHVANIE 99 Query: 76 NMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGEL 135 +M+ + +D+LVI P L V+ EA ++G+ V+ R + D GE Sbjct: 100 DMLAKDLDILVIAPMEDTGLEAVLDEAAEKGVPVILSARTTQGE-YVTTVYSDQAWEGER 158 Query: 136 QAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPE 195 A+ + + +P + G ++ G V+ +++V +Q + + Sbjct: 159 CAELIGEKIPDAKVVELRGIEGTSSVAGREKGFRDVMAEQY--PDMEIVVEQTA-NFSRQ 215 Query: 196 NALKIMENALTANNNK-IDAVVASNDATAGGAIQALSAQGLSG--KVAISGQDADLAGIK 252 A+ M N L A IDAV ND A GA+QA+ GL+ + + G D + Sbjct: 216 EAMDAMANILQAKGPDAIDAVYCHNDEMALGAVQAIKDAGLTPGEDIQVVGIDGQKEAWE 275 Query: 253 RIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNK 312 + +G TV T E+ ++ +G+ + +T ++ + K Sbjct: 276 LVKSGEMLGTVQCSPKH-GPTVFEVIQKILDGETVQKET------------IVPDQVITK 322 Query: 313 NNIKD 317 N+ + Sbjct: 323 ENVDE 327 >UniRef50_A5ZT83 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZT83_9FIRM Length = 324 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 84/339 (24%), Positives = 132/339 (38%), Gaps = 35/339 (10%) Query: 1 MKIKNILLTLCTSLLLT---------NVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKA 51 M K I + L ++ ++ + A + IGM+ +L D A Sbjct: 1 MNKKAISILLTAAMGVSVLAAGTVTVSAAEKKDKYVIGMSQCNLGEPWRVAMNDQIAMAA 60 Query: 52 ESL-GAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVL 110 E +V A + Q++ IEN + GVD+++ P L+N V A GI V+ Sbjct: 61 EKHPEFEVIFADAAQDNSKQIADIENFVQMGVDLIITSPNEATPLTNAVSAAYDAGIPVI 120 Query: 111 AYDRMINDADIDFYISFDNEKVGELQAKALVDIV--PQGNYFLMGGSPVDNNAKLFRAGQ 168 DR I+ +I DN +G + + + D + G + G + G Sbjct: 121 LLDRKIDGDKYTQFIGADNVDMGRIAGEYIADTLLPDGGKVCEIKGLEGTSGGIDRDNGF 180 Query: 169 MKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQ 228 + +K + KI++V D WL E A+ + E L N ++ID +A ND A GA Sbjct: 181 REGIKK---NDKIEIVAVNNAD-WLREKAITVAEEMLQTN-DEIDLFLALNDPMAEGAYI 235 Query: 229 ALSAQGLSGKVAISGQDADL---AGIKRIAAGTQTMTVYKPITLLANTAAEIAVELG-NG 284 A G G + G D GI+ + G +MT P A E A +L G Sbjct: 236 AAKNAGREGDILFVGFDGLPTPDGGIRSVMDGRLSMTQVYPTG--GTEAIESAYQLLVEG 293 Query: 285 QEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDG 323 +E T LT V +N ++ + K G Sbjct: 294 KELDKTLT------------LTSEIVTPDNAEELLEKFG 320 >UniRef50_UPI0001B4C057 putative D-ribose-binding protein component of ABC transporter n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B4C057 Length = 325 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 75/292 (25%), Positives = 127/292 (43%), Gaps = 6/292 (2%) Query: 4 KNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSA 63 + T C A K++ IG+A+ +L+ + + + + +A+ G KV V A Sbjct: 19 MVVGATACGRGGNGAKTADGKQITIGLAVANLQADFFNQIKQSVTAEAKKKGIKVIVSDA 78 Query: 64 NGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDF 123 G+ TQ++QI++ I+R V ++ IP VK A + I V+ DR Sbjct: 79 RGDAATQVNQIQDFISRQVSAIIYIPAGATAAGVPVKAANRAKIPVVTVDRNPPGEPGKS 138 Query: 124 YISFDNEKVGELQAKALVDI-VPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIK 182 +I+ D+ +V +G ++ G + G + LK ++ IK Sbjct: 139 FIASDSVAAARTLGNYVVKESGGKGQLAILQGQIGTTPQVDRQKGFGQALK---NAPGIK 195 Query: 183 VVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAIS 242 VV Q D W + A + ++ L A+ ID + DA A GA QA+ A G K I Sbjct: 196 VVSQQPAD-WAQDKAYSVSQDMLQAHPG-IDILWGQADAMALGAAQAVKASGSKKKHLIV 253 Query: 243 GQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLN 294 G D D+AG+K + GT T+ + + + AV++ G++ A Sbjct: 254 GFDGDIAGLKAVRRGTVDATMVQQTRKMGRMSVNTAVDIIKGKKVPAQQLQP 305 >UniRef50_B8D164 ABC-type sugar transport system, periplasmic component n=6 Tax=Bacteria RepID=B8D164_HALOH Length = 308 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 59/281 (20%), Positives = 123/281 (43%), Gaps = 9/281 (3%) Query: 21 AHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINR 80 A A ++ IG ++ + + + + K A+ G ++ V AN + Q+S +E+ I R Sbjct: 24 ALADDITIGASLLTQQHPFYVQLKQAMEKAADDNGVELIVSIANQDLNKQISDVEDFIVR 83 Query: 81 GVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKAL 140 GVD +V+ P + + + + +AK+ GI V+ D ++D +++ DN G + + + Sbjct: 84 GVDAIVLSPVDSKGVVGAIIKAKRAGIPVITVDISAEGVEVDAHVATDNYYGGRIAGETM 143 Query: 141 VDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALK 199 ++ +G ++ PV + + AG + + Y I++V Q G AL Sbjct: 144 AKVLNGKGQVAIIDY-PVVQSVRDRVAGFKEAVSKYP---GIEIVAIQP--GITRPEALN 197 Query: 200 IMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGT- 258 +N L A+ ++D + D A ++ A+ + G+ V + G D + Sbjct: 198 TAQNILQAHP-EVDGIFGFGDDAALASVVAVKSAGMEDDVKVIGFDGMEEARNAVKKEES 256 Query: 259 QTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKD 299 V + + E A+ + G++ + + + GL Sbjct: 257 FVAVVCQYPGEMGRLGLETALRVIKGEKVEKEIPVLPGLFT 297 >UniRef50_B0P8T4 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8T4_9FIRM Length = 333 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 71/338 (21%), Positives = 133/338 (39%), Gaps = 41/338 (12%) Query: 1 MKIKNILLTLCTSLLLT----NVAAHA------------------------KEVKIGMAI 32 MK N+LL ++ +T ++ +++ +G + Sbjct: 7 MKKANMLLAALCAVGMTASLFGCSSGQAQGGDTQPQASAAPAADAASAPQREQIVVGFSN 66 Query: 33 DDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNG 92 E + + A++ G K+ Q NG+ Q Q+E+ I +GVD +V+ P + Sbjct: 67 WSRSFEFYVDLEKGMQEVADAQGVKLITQDPNGDLAAQTKQVEDFITQGVDGIVLCPIDS 126 Query: 93 QVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVPQGNYFLM 152 + Q GI ++ D + D+ +I+ DN G+L A+ + + + + Sbjct: 127 NAAVTEAETINQAGIPLVTTDIAVAGGDVASHIASDNTLGGQLAAQFIGEQLGGTGKVAL 186 Query: 153 GGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKI 212 +P + G + I++V Q + E L +MEN L +N + + Sbjct: 187 INNPTITSLIERETGFTDTMAQKY--PDIEIVAVQSGES-KREKGLSVMENILQSNPD-V 242 Query: 213 DAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGT-QTMTVYKPITLLA 271 V A ND GA+QA+ A + I G DA +K I G+ +V + L Sbjct: 243 QGVFAVNDMMGLGALQAVQAAQRDD-IVIVGFDATEEAVKYIKEGSALKASVAQNPVELG 301 Query: 272 NTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPID 309 T E +++ G++ + + VP L+T + Sbjct: 302 KTTMETMLKVIAGEQVEKN-------IPVPVELVTAGN 332 >UniRef50_Q9K631 Rhizopine ABC transporter (Rhizopine-binding protein) n=1 Tax=Bacillus halodurans RepID=Q9K631_BACHD Length = 327 Score = 244 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 75/337 (22%), Positives = 141/337 (41%), Gaps = 35/337 (10%) Query: 2 KIKNILLTLCTSLLLTNVAAHAK---------------EVKIGMAIDDLRLERWQKDRDI 46 K+ L+ C S LL A+ + ++ IG A D Sbjct: 7 KVAVALIIYCLSFLLVGCASDSDEQMGTESVNKAGDDGKMVIGFAHPDFNDMFLGFLLAG 66 Query: 47 FVK-KAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQE 105 +AE +V A + + Q++Q+E++I +GVD ++ IP + +V A+Q Sbjct: 67 VQAYEAEQTNVEVVYVDAENDSDGQIAQVEDLIAQGVDAIMAIPVDLIATEFIVDRAQQA 126 Query: 106 GIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLF 164 G+ V+ +R + + D Y+ D+ + G +Q + + ++ +G +M G Sbjct: 127 GVPVVLINRDSVERE-DAYVGSDSLQAGTIQMEEVAAVLKGKGKIAIMNGQMGHTAQINR 185 Query: 165 RAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAG 224 G +V+ Y ++VV + GW E ++ME+ + + DAVVA+ND A Sbjct: 186 TLGNKQVVDQYP---GMEVVIEG-TGGWSREKGKELMESWI-ESGQTFDAVVANNDEMAI 240 Query: 225 GAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNG 284 GAI A G+ ++ +G D + ++ G T++V++ T E A++L G Sbjct: 241 GAIMAAEEAGIVDELVFAGIDGTPDALDYMSKGKLTISVFQDAKGQGQTGLEQAIKLAKG 300 Query: 285 QEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTVIK 321 + + T + + K N+ + K Sbjct: 301 ESAEKMTN------------IPYETITKRNVDEYKKK 325 >UniRef50_C2AIY5 Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=1 Tax=Tsukamurella paurometabola DSM 20162 RepID=C2AIY5_TSUPA Length = 366 Score = 244 bits (623), Expect = 4e-63, Method: Composition-based stats. Identities = 124/342 (36%), Positives = 183/342 (53%), Gaps = 24/342 (7%) Query: 7 LLTLCTSLLLTNVAAHAKEV--------KIGMAIDDLRLERWQK-DRDIFVKKAESLG-- 55 L + LT A++ + I + + + + R++ D+ +F KK L Sbjct: 16 LAVALGAASLTACNANSSQKSGDAGGGNTIALLLPESKTTRYEAFDKPLFEKKVAELCSS 75 Query: 56 AKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRM 115 KV +A+ +E Q Q+E I G +V+ P NG +V AK I V+AYDR Sbjct: 76 CKVSYYNADQDEAKQSQQVETAITAGAKAIVLGPVNGDGAGGMVASAKNAKIPVIAYDRF 135 Query: 116 INDADIDFYISFDNEKVGELQAKALVDIVPQ-GNYFLMGGSPVDNNAKLFRAGQMKVLKP 174 I AD +Y+SFDNE+VG +Q K+LVD + GN ++ G+P D NA F+AG V+ Sbjct: 136 IAGAD--YYLSFDNEQVGRIQGKSLVDALGGRGNILMLNGAPSDPNAAQFKAGARSVIGQ 193 Query: 175 YVDSGKIKVVGDQWVDGWLPENALKIMENALTANNN-KIDAVVASNDATAGGAIQALSAQ 233 I+V+G+ W P+ A + + + L+ N I V A+ND AGG + AL+ Sbjct: 194 ----SGIRVIGEYDNPDWSPDKAQQFVTDQLSRNKPSDIQGVYAANDGQAGGVVAALTGA 249 Query: 234 GLSGK--VAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPK--- 288 G+S I+GQDA+LA ++RI AG Q+MTVYKPI + ANTAAE+AV L G++ Sbjct: 250 GVSADALPPITGQDAELAAVQRIVAGRQSMTVYKPIAIEANTAAEVAVALATGKDVPTTT 309 Query: 289 ADTTLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 A + KDV S + TPI V K N+ TV+ D F+ ++ Sbjct: 310 ASGIQRSTFKDVSSYIFTPIAVTKANVASTVVADKFYTADQI 351 >UniRef50_Q65S41 RbsB protein n=8 Tax=Pasteurellaceae RepID=Q65S41_MANSM Length = 313 Score = 244 bits (623), Expect = 4e-63, Method: Composition-based stats. Identities = 82/294 (27%), Positives = 135/294 (45%), Gaps = 14/294 (4%) Query: 3 IKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQS 62 +KNI L +A A + +I + + L E + R + A+ + VQ Sbjct: 6 LKNIFKFSALISALPALAFAADKPQIALLMKTLSNEYFISMRQGAEETAKEKNIDLIVQV 65 Query: 63 AN-GNEETQ-MSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD 120 A + Q + +ENMI + VD +++ P + ++A++ GI ++ D ++ Sbjct: 66 AEKEDSTEQLVGLVENMIAKKVDAIIVTPNDSIAFIPAFQKAEKAGIPIIDLDVRLDAKA 125 Query: 121 IDF------YISFDNEKVGELQAKALVDIVPQ-GNYFLMGGSPVDNNAKLFRAGQMKVLK 173 + Y+ DN G L+AK L + + + GN ++ G P +N + + G +K Sbjct: 126 AEAAGLKFNYVGVDNFNGGYLEAKNLAEAIGKKGNVAILEGIPGVDNGEQRKGGALKAFA 185 Query: 174 PYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQ 233 Y D IK+V Q W E AL + N LTAN N I+ + A+ND A GA+ A+ Sbjct: 186 EYPD---IKIVASQSA-NWETEQALTVTTNILTANPN-INGIFAANDNMAIGAVTAVENA 240 Query: 234 GLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEP 287 GL+GKV +SG D I+ + G T+ + A E A++ N QE Sbjct: 241 GLAGKVLVSGYDGIPLAIEYVKQGKMQNTIDQLPKKQVAIAIEHALKQINKQEI 294 >UniRef50_A6UHJ3 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Sinorhizobium RepID=A6UHJ3_SINMW Length = 322 Score = 243 bits (621), Expect = 7e-63, Method: Composition-based stats. Identities = 71/318 (22%), Positives = 122/318 (38%), Gaps = 25/318 (7%) Query: 14 LLLTNVAAHAKEVKIGMAIDDLRLERWQK-DRDIFVKKAESLGAKVFVQSANGNEETQMS 72 + + A K+ +IG + + ++DI + A+ ++ + E Q++ Sbjct: 23 MPAGDAVAQDKKFRIGFSQATTIEPWRAQFNKDIIAEAAKHPDVELIITDGEDRTEKQVA 82 Query: 73 QIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKV 132 +EN+I + VD L++ P L+ VV++A I V DR + ++ DN+ + Sbjct: 83 DVENLIRQEVDALLVSPKESAGLTGVVQQAIDAKIPVFVLDRNVETDQYTQFVGGDNKLI 142 Query: 133 GELQAKALVDIVP-----QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQ 187 G + V+++ QGN + G A G + IK + D+ Sbjct: 143 GRAAGEYAVELLGGKGKAQGNIVEIWGGMGTQPAHDRHDGFHEFTDK---EPGIKNLLDK 199 Query: 188 WVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDAD 247 W + A IM AL NN KID V ND A GA A G ++ G DA Sbjct: 200 QSGDWKQDQAYNIMATAL-RNNEKIDLVYGHNDPMAYGAYLAAKDAGREKEIKFIGIDAL 258 Query: 248 L-AGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLT 306 G+ ++ G T T AV+ G++ + TL+ Sbjct: 259 PNEGVTWVSNGELTATFLYATP--GAEGLRQAVKFLKGEKVEKTVTLDT----------- 305 Query: 307 PIDVNKNNIKDTVIKDGF 324 + V + N + +G Sbjct: 306 -LKVTEENAAQIMKDNGL 322 >UniRef50_B1VWK1 Putative ABC transporter solute-binding protein n=7 Tax=Streptomyces RepID=B1VWK1_STRGG Length = 370 Score = 243 bits (621), Expect = 7e-63, Method: Composition-based stats. Identities = 119/326 (36%), Positives = 173/326 (53%), Gaps = 18/326 (5%) Query: 17 TNVAAHAKEVKIGMAIDDLRLERWQK-DRDIFVKKAESL---GAKVFVQSANGNEETQMS 72 ++KIG+ + + + R++K DR I KK L KV +A + Q Sbjct: 36 GGSEKKGDDLKIGLLLPENQTARYEKFDRPIIEKKISELTGGKGKVTYANAKQDANAQAQ 95 Query: 73 QIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKV 132 ++ MI VD L++ + + ++N +K+AK GI V+A+DR+ ID Y SFDNE+V Sbjct: 96 HVDTMITNKVDALIVGAVDSKAIANSIKKAKDAGIPVVAFDRLAEGP-IDAYTSFDNEEV 154 Query: 133 GELQAKALVDIVPQ----GNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQW 188 G Q AL++ + G +M G+ D NA LF+ G VL GK+K + Sbjct: 155 GRAQGTALLEALGDKADGGTIVMMNGAITDPNAALFKKGAKSVLD-----GKVKYGKEYD 209 Query: 189 VDGWLPENALKIMENALTANN-NKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDAD 247 W PENA ME A+TA +KID V ++ND AGG I AL G+S ++GQDA+ Sbjct: 210 TKEWKPENANANMEAAITALGKDKIDGVYSANDGMAGGIITALKGAGISPLPPVTGQDAE 269 Query: 248 LAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNG---LKDVPSRL 304 LAG++RI G Q M+VYK AAE+AV L G++ + T K +P+ L Sbjct: 270 LAGVQRIVTGEQFMSVYKSYPAEGIVAAEMAVALAKGEKLDSIATSKVDSATTKGIPTVL 329 Query: 305 LTPIDVNKNNIKDTVIKDGFHKESEL 330 + + + K+NIKDTVIKDG E+ Sbjct: 330 VPVVSLTKDNIKDTVIKDGIWTLDEI 355 >UniRef50_P49308 Putative rhizopine-binding protein n=37 Tax=Proteobacteria RepID=MOCB_RHIME Length = 309 Score = 243 bits (620), Expect = 9e-63, Method: Composition-based stats. Identities = 77/329 (23%), Positives = 142/329 (43%), Gaps = 27/329 (8%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESL-GAKVF 59 MK + + +L + AAHA+ IG ++ + R+ A++L G + Sbjct: 1 MKK---FIIGIAAAVLVSTAAHAE--TIGASMAVFDDKFGTLLRNGMEDYAKTLDGVDLQ 55 Query: 60 VQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIND- 118 ++ A + Q SQI+N I GVD +++ P + + + K A GI ++ +R + Sbjct: 56 IEDALNDVAKQQSQIQNFIAAGVDAIIVQPVDTDATTVMSKLAADAGIPLVYVNREPVNI 115 Query: 119 ---ADIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKP 174 + +++ + G LQ + + ++ +G ++ G + A++ VL Sbjct: 116 DTLPEKQAFVASNEVDSGTLQTREICKLLDGKGKAVVIMGELSNQAARMRTKDIHDVLAT 175 Query: 175 YVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQG 234 I++V +Q W +M N L+A + DAV+A+ND A GAIQAL A G Sbjct: 176 -DQCKGIEIVQEQTA-NWQRTQGADLMTNWLSA-GIEFDAVIANNDEMAIGAIQALKAAG 232 Query: 235 LS-GKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTL 293 S V I G DA + +AAG ++V++ + + A++L G+ + Sbjct: 233 RSMDSVVIGGIDATDDALAAMAAGELDVSVFQDAVGQGKGSIDAALKLSKGEAVERKIY- 291 Query: 294 NNGLKDVPSRLLTPIDVNKNNIKDTVIKD 322 + V K N+ + K+ Sbjct: 292 -----------IPFELVTKANLAEFQGKN 309 >UniRef50_A1TPE5 Periplasmic binding protein/LacI transcriptional regulator n=5 Tax=Bacteria RepID=A1TPE5_ACIAC Length = 322 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 66/287 (22%), Positives = 109/287 (37%), Gaps = 14/287 (4%) Query: 23 AKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGV 82 K + +G + E + + A G ++ A +E Q+ I + I + V Sbjct: 29 QKPIVLGFSQVGAESEWRTANTESIKSAARDAGIELKFSDAQQKQENQIKAIRSFIAQRV 88 Query: 83 DVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYI---SFDNEKVGELQAKA 139 DV+ P V++EAK I V+ DR +N D Y+ D + G + Sbjct: 89 DVIAFSPVVESGWEPVLREAKAAKIPVVLTDRAVNTKDTSLYVTFMGSDFVEEGRKAGRW 148 Query: 140 LVDIVPQG----NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPE 195 LV+ + N + G+ A + G +V+K K K++ Q + Sbjct: 149 LVEKMKDAKGDVNIVELQGTVGSAPAIDRKKGFEEVVKA---DPKFKIIRSQ-TGDFTRA 204 Query: 196 NALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS--GKVAISGQDADLAGIKR 253 ++ME L A KI+ + A ND A GAIQA+ GL + I DA + Sbjct: 205 KGKEVMEAFLKAEGRKINVLYAHNDDMAIGAIQAIEEAGLKPGKDITIISIDAVKGAFEA 264 Query: 254 IAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDV 300 + AG +TV LL ++ G+ G+ + Sbjct: 265 MMAGKLNVTVECSP-LLGPQLMAAVKDIKAGKTVPKRIVTEEGIFPM 310 >UniRef50_B0PDL3 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PDL3_9FIRM Length = 373 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 109/360 (30%), Positives = 179/360 (49%), Gaps = 34/360 (9%) Query: 1 MKIKN--ILLTLCTSLLLTNVAA-----------------------HAKEVKIGMAIDDL 35 MK + + ++ LL + +KIG++ Sbjct: 16 MKKFLCGLFAFVLSASLLAGCQSPAPTDTAASASTASLGDTQANQPEDGRIKIGVSFASE 75 Query: 36 RLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVL 95 R++ D+ I +KAE LGA + Q AN + Q +Q+EN+I++G+DVLV+ +G + Sbjct: 76 AQYRFKFDKQIMEQKAEELGADIIFQYANYDATKQANQVENLISQGIDVLVLNVVSGN-M 134 Query: 96 SNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVP--QGNYFLMG 153 N+V++ + +GI V+ +D + A +D + DN KVG LQ +A ++ + GN L+ Sbjct: 135 VNLVEKVRSQGIPVITFDNTVEGAQVDLNVDRDNVKVGRLQLEAALEYMGPEGGNVVLVK 194 Query: 154 GSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKID 213 G P A+ G V + + + +V DQ+ + W P+ ALK +ENAL+ANN+ I Sbjct: 195 GDPGSAVAQRISQGYEAVAAEHPE---LNIVADQFHEAWSPDKALKTVENALSANNDDIQ 251 Query: 214 AVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANT 273 A VAS D+ A G + A+ A L GK + G D +++ K I G TM+++ I Sbjct: 252 AFVASADSVALGIVPAIKAAKLDGKAFLCGMDVEISAAKLINEGVMTMSIWTDIVSGDQR 311 Query: 274 AAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIK---DTVIKDGFHKESEL 330 E AV+LG G+E D G D+P L+ + V K+N++ D + G+ E E+ Sbjct: 312 TIEAAVKLGKGEEITPDEIQQIGGFDIPVLLVDVMPVTKDNLRQWLDEIAPAGWATEEEI 371 >UniRef50_A4F8A2 Binding protein/LacI transcriptional regulator n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4F8A2_SACEN Length = 334 Score = 241 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 76/309 (24%), Positives = 113/309 (36%), Gaps = 28/309 (9%) Query: 18 NVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAES-LGAKVFVQSANGNEETQMSQIEN 76 + IGM+ +L + + K AE V A + Q+S +EN Sbjct: 41 ACKGPDSKYTIGMSQANLAEPYRVRMDEDIRKAAEKVPQFDVQFADAAKDNSKQVSDVEN 100 Query: 77 MINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQ 136 + + VD+L+I P L++VVK+A EGI V+ DR + YI DN ++G Sbjct: 101 FMTKKVDLLMISPNEAAPLTDVVKKAYNEGIPVVVLDRKVEGEAFTTYIGADNVQIGRQA 160 Query: 137 AKALVDIV--PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLP 194 + + + G + G A G M+ + KI+VV + W Sbjct: 161 GEYFKNTLLPQGGKIVQLKGLSGSTPAAEREKGFMEGIA----GSKIEVVDTADGE-WER 215 Query: 195 ENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADL---AGI 251 + M+ L A+ + I AV A ND A GA A A G + G D GI Sbjct: 216 SVGQQKMDALLKAHPD-IQAVYAQNDPMAEGAWLAAQAAGRKD-LKFVGIDGLPIESGGI 273 Query: 252 KRIAAGTQTMTVYKPITLLANTAAEIAVELGNG-QEPKADTTLNNGLKDVPSRLLTPIDV 310 K + G + T P A E A +L Q + T L V Sbjct: 274 KAVEQGRLSATNLYPTG--GEEAVEAARKLLIDCQPVPKEQT------------LPTELV 319 Query: 311 NKNNIKDTV 319 + N Sbjct: 320 TRENAAQVY 328 >UniRef50_C7MA39 Monosaccharide-binding protein n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MA39_BRAFD Length = 383 Score = 241 bits (615), Expect = 3e-62, Method: Composition-based stats. Identities = 123/342 (35%), Positives = 175/342 (51%), Gaps = 32/342 (9%) Query: 21 AHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINR 80 A E +G+A+ ERW D + + E G V +Q A+ + TQ QI+ MIN Sbjct: 37 APPSEQTVGVAMPTQTYERWVADGNNIKEGLEGKGFTVDMQYADDDIPTQQQQIDQMINS 96 Query: 81 GVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI-NDADIDFYISFDNEKVGELQAKA 139 GV VL+I +G LS + A GI V+AYDR++ + ++DFY++FDN KVG QA A Sbjct: 97 GVSVLLIASIDGASLSAQLDAAAAAGIPVVAYDRLLTDSENVDFYVTFDNYKVGVNQANA 156 Query: 140 L-------------VDIVPQG--NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVV 184 L D P+G N L GS DNNA LF G + L+PY D G ++V+ Sbjct: 157 LLYGLGLLDESFEPADDAPEGPLNVELFAGSLDDNNAHLFWDGAIDTLQPYFDDGTLEVL 216 Query: 185 GDQ------WVDGWLPENALKIMENALTANNN---KIDAVVASNDATAGGAIQALSAQGL 235 Q W E A K ME LT + N ++ V+A D + G I AL GL Sbjct: 217 SGQMDIDQAATQRWEQETAQKRMETLLTTHYNGGEELAGVLAPADPLSRGIINALQNTGL 276 Query: 236 -----SGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKAD 290 G ++GQDA++A IK IA G Q T++K LA+ A A + G EP+A+ Sbjct: 277 GPTIDEGLPIVTGQDAEIASIKLIADGVQHSTIFKDTRDLADQAIVAAESILTGGEPEAN 336 Query: 291 --TTLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 T +NG K VPS LL V ++N ++ ++ G++ E ++ Sbjct: 337 DTETYDNGAKVVPSYLLEVQMVLESNYEEILVDSGYYTEEQV 378 >UniRef50_B0NBQ1 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NBQ1_EUBSP Length = 352 Score = 241 bits (615), Expect = 4e-62, Method: Composition-based stats. Identities = 77/351 (21%), Positives = 148/351 (42%), Gaps = 39/351 (11%) Query: 1 MKIK--NILLTLCTSLLLTNVAAHAKE-----VKIGMAIDDLRLERW----QKDRDIFVK 49 MK + I L LC + ++ A K+ +KIG+AI + Sbjct: 4 MKSRIARICLALCLAAMMAGCAGTEKKEEKTGIKIGVAIYRGDDAFISSLCASLENAIKD 63 Query: 50 KAESLGAKVFV--QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGI 107 K E LG KV V A ++ +Q Q+++ I +G D + + + V + +V +AK+ GI Sbjct: 64 KEEKLGKKVVVNIADAKNSQSSQNDQVDDFIRKGYDAICVNMVDRTVAAVIVDKAKEAGI 123 Query: 108 KVLAYDRMINDADI-----DFYISFDNEKVGELQAKALVDIV----------PQGN--YF 150 ++ ++R + D+ +Y+ D + GEL+ + + D G Y Sbjct: 124 PIIFFNREPVEEDMAIWNQTYYVGTDAREAGELEGQIVADAWKSQESRIDKNGDGKLQYV 183 Query: 151 LMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNN 210 ++ G V ++ + +K + + + + W+ A ++M+ + + Sbjct: 184 MLEGEQVHQDSLIRTEYSVKTILK--EGIVTEKLASG-TGNWMRSPAYELMQEWIGQYGS 240 Query: 211 KIDAVVASNDATAGGAIQALSAQGLSG--KVAISGQDADLAGIKRIAAGTQTMTVYKPIT 268 +I+ V+++ND A GAI+AL G+SG + G D G+++I G TV Sbjct: 241 QIEVVLSNNDEMAMGAIEALVENGMSGGNGPIVVGIDGTEDGLEKIIKGEMEGTVMNDAR 300 Query: 269 LLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTV 319 A + IA G++PK + G + V +N+++ + Sbjct: 301 GQAESILGIACACAEGKDPKQEVPELKGQ----YVRVPHSPVTADNVQEFI 347 >UniRef50_D1PGX0 Putative DNA-binding response regulator/sensor histidine kinase n=1 Tax=Prevotella copri DSM 18205 RepID=D1PGX0_9BACT Length = 497 Score = 240 bits (614), Expect = 4e-62, Method: Composition-based stats. Identities = 76/317 (23%), Positives = 131/317 (41%), Gaps = 20/317 (6%) Query: 1 MK-IKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVF 59 MK I IL+ L S+LL A K V IG++ + R + + ++ + + + Sbjct: 1 MKRINIILIVLSFSMLLLLGACTQKNVVIGVSQCCGGVWREKVNNEMRQAQYQYKNVDLL 60 Query: 60 VQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDA 119 +A + + Q QI++MI R VD++V+ P N ++ ++ A + I V+ +DR + Sbjct: 61 FTTAENDGQCQARQIDSMIARKVDLIVVAPDNVNDVTPAIERAYRAHIPVILFDRKVKTP 120 Query: 120 DIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDS 178 I DN + G A+ L + +G + G + G +V+K Y Sbjct: 121 HYTASIGGDNVEAGREVARFLASKLDGKGTVVEITGLKDASPVIERHRGFHEVMKNYP-- 178 Query: 179 GKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGK 238 IKVV + W E A ++M+ L D V +D A GA +G+ + Sbjct: 179 -GIKVVTLES--NWKLERAQELMKQYLDK-GGHADGVFGHSDLGAIGAFLEAERRGIDKQ 234 Query: 239 VAISGQDADL---AGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNN 295 + I G D G+ R+ G + P E+A+ + G+ K D + Sbjct: 235 MLIVGIDGLPGEWEGVDRVKRGQFAASYVYPT--QGEKIMELAMNILQGKPYKKDNVMK- 291 Query: 296 GLKDVPSRLLTPIDVNK 312 S L TP + + Sbjct: 292 ------SFLATPENCDA 302 >UniRef50_A6LHB1 Sensor protein n=4 Tax=Bacteroidales RepID=A6LHB1_PARD8 Length = 887 Score = 240 bits (614), Expect = 4e-62, Method: Composition-based stats. Identities = 72/306 (23%), Positives = 123/306 (40%), Gaps = 17/306 (5%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVK--IGMAIDDLRLERWQKDRDIFVKKAESLG-AK 57 MK LL T ++L + K+ K IG++ L Q + +A + + Sbjct: 1 MK-HPFLLVWLTLIVLCGCTSSGKQKKHVIGLSQCMLDDAWRQAMINDMRIEASNYDDVE 59 Query: 58 VFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIN 117 + ++ A N ETQ+ QI ++I + VDVL+I PY + ++ V +EA + GI + DR +N Sbjct: 60 IIIKDAQNNNETQIQQIRDLIRQKVDVLIISPYQSEPITAVAEEAYRAGIPTIITDRKVN 119 Query: 118 DADIDFYISFDNEKVGELQAKALVDIVPQGNYFL-MGGSPVDNNAKLFRAGQMKVLKPYV 176 ++ +N ++G + +P L + G + A+ G + L+ Sbjct: 120 TDQYTSFVGANNYEIGLAAGNYAANYLPPNAIILEIWGLTQTSPAQERHKGFVDALRERE 179 Query: 177 DSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQG-- 234 D K+ WL + A ME + +ID V A ND A A + A Sbjct: 180 DLSFRKI-----EGQWLVDTAR--MELRKLEHPEQIDFVYAHNDMMAIAAREYFMAWDSI 232 Query: 235 LSGKVAISGQDADL-AGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTL 293 ++ I G DA AG++ + G + P A+ + G+ L Sbjct: 233 RGRELRIIGVDAVAGAGLEAVEDGRINASFLYPTG--GEQVIRTAMRIIQGEPVDKFIPL 290 Query: 294 NNGLKD 299 D Sbjct: 291 RTAPVD 296 >UniRef50_A6E6Q9 Sensor protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6E6Q9_9SPHI Length = 918 Score = 240 bits (614), Expect = 4e-62, Method: Composition-based stats. Identities = 70/330 (21%), Positives = 132/330 (40%), Gaps = 22/330 (6%) Query: 1 MKI-KNILLTLCTSLLLTNVAAHAKE--VKIGMAIDDLRLERWQKDRDIFVKKAE-SLGA 56 M + LL T+LL + ++ IG + + D + GA Sbjct: 1 MNLPSRYLLLFITALLSFSCNQKQEKHAYLIGFSQCVGSDLWRKTMLDEMKMELSLHPGA 60 Query: 57 KVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI 116 K+ A+ N TQ+ Q++ M+++G+D+L+I P + L+ +V++ +GI V+ DR Sbjct: 61 KLVYADADNNSNTQIKQVKEMLDQGIDLLIISPNEAKPLTEIVEQTYSDGIPVIVIDRKT 120 Query: 117 NDADIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPY 175 Y+ DN ++G + ++ L + + N + G P + G LK + Sbjct: 121 TSNLYTCYVGADNYQIGYMASQYLGNTISGPANILEVMGLPGSSPTIERNKGFNDGLKKF 180 Query: 176 VDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGL 235 + + Q W+ NA + + ++ N ID V A ND A A G+ Sbjct: 181 PNLK----IKSQVYGDWMKPNAERQLSK-ISDQLNDIDVVFAHNDNMAFAAQSVFKKLGI 235 Query: 236 SGKVAISGQDADLAG---IKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTT 292 + + G DA ++ I+ G ++ P A A+++ + + Sbjct: 236 ASQAKFIGIDATPGAGGGLQMISNGLIDASMLYPTG--GKEAITTAIKIMDKIPFSKELI 293 Query: 293 LNNGLKDVPSRLLTPIDVNKNNIKDTVIKD 322 L PS ++ +V N++ IK Sbjct: 294 L-------PSLVIDSSNVRLMNMQWERIKT 316 >UniRef50_D2Q1K0 Xylose ABC transporter, substrate-binding protein n=77 Tax=Bacteria RepID=D2Q1K0_9ACTO Length = 379 Score = 240 bits (613), Expect = 6e-62, Method: Composition-based stats. Identities = 118/338 (34%), Positives = 178/338 (52%), Gaps = 29/338 (8%) Query: 22 HAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRG 81 +++ IG+++ ERW D +K E+ G +V +Q AN + TQ Q++ MI RG Sbjct: 36 KPEDLTIGVSMPTQTSERWIADGKAVKEKLEAKGYQVDLQYANDDIPTQSQQVDQMITRG 95 Query: 82 VDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDA-DIDFYISFDNEKVGELQAKAL 140 DVL+I +G LS+ ++ A + I V+AYDR+I + +++FY+SFDN KVG QAKAL Sbjct: 96 ADVLIIAAIDGTALSSQLQAAADKSIPVVAYDRLIRGSKNVNFYVSFDNFKVGVAQAKAL 155 Query: 141 VDIVP-------QG------NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQ 187 + + +G N L GS DNN + F G M+ LKPY D+G + V Q Sbjct: 156 LRGLGLETPDGSKGSKTGPVNIELFAGSLDDNNTQYFFGGAMQTLKPYFDNGSLVVKSKQ 215 Query: 188 W------VDGWLPENALKIMENALTANNNK---IDAVVASNDATAGGAIQALSAQGL--- 235 W E A K ME+ LT++ N + V++ D + G I AL G Sbjct: 216 TGMEQVATLRWQQEAAQKRMEDLLTSSYNDGAKVGGVLSPYDGISRGIITALHNAGYGTP 275 Query: 236 -SGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKAD--TT 292 + I+GQDA++A +K I G Q+ T++K LLA A A +EP+A+ T Sbjct: 276 ANPTPVITGQDAEIASVKLIDTGVQSSTIFKDTRLLAEQAVNAAEAFLQKKEPEANDTKT 335 Query: 293 LNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 +NG K VP+ LL V K +IK ++ G++ +E+ Sbjct: 336 YDNGTKVVPAYLLPIQTVFKEDIKKQLVDTGYYTAAEV 373 >UniRef50_B1WQL3 Putative ribose ABC transporter n=1 Tax=Cyanothece sp. ATCC 51142 RepID=B1WQL3_CYAA5 Length = 380 Score = 240 bits (613), Expect = 6e-62, Method: Composition-based stats. Identities = 68/318 (21%), Positives = 137/318 (43%), Gaps = 21/318 (6%) Query: 16 LTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSAN------GNEET 69 L++ + +I WQ+ A+ LG K V+ G+ + Sbjct: 68 LSHQGTATQPWQIAYLFKTRSDPFWQQMEQGVQTVAQELGIKTLVKFTEEKPNTLGDVKK 127 Query: 70 QMSQIENMINRG-VDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFD 128 Q+S I +I+ +D LVI P + L ++++A Q+GIKV+ D I+ I +++FD Sbjct: 128 QISTILELIDNNDLDGLVIAPEDSIQLVPIIEKATQQGIKVIVIDTPIDTDQILTFVTFD 187 Query: 129 NEKVGELQAKALVDIV-------PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKI 181 N + G++ + ++ + + N ++ GS + N R G ++ LK + + Sbjct: 188 NFEGGQILGEWVIQKLTQSSRRNNKINILILEGSLHEENTIERRQGFLEGLKRANKNYSL 247 Query: 182 KVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAI 241 +++ + D W + A I + L ID ++A++D A GA +A+ SG + I Sbjct: 248 EILDLKSAD-WETKKAKMITQAWLEKFPT-IDVIMAADDQMAVGASEAVQEANKSG-III 304 Query: 242 SGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVP 301 +G D G+ I G T+ + + ++ + ++ G + Sbjct: 305 TGFDGTPYGLNAIKTGQIDATINQLPRTQISLITQLMINSLEKEQTTLPLCQLIGQEQTE 364 Query: 302 SRLLTPIDVNKNNIKDTV 319 + LL + ++NI + + Sbjct: 365 NSLL----ITQDNINEAL 378 >UniRef50_B2IJW8 Periplasmic binding protein/LacI transcriptional regulator n=14 Tax=Alphaproteobacteria RepID=B2IJW8_BEII9 Length = 314 Score = 239 bits (612), Expect = 8e-62, Method: Composition-based stats. Identities = 75/320 (23%), Positives = 138/320 (43%), Gaps = 25/320 (7%) Query: 3 IKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESL-GAKVFVQ 61 +K ILL ++ + A IG+++ R+ + +SL V ++ Sbjct: 1 MKRILLAAVMAINFSCSAGAES---IGVSMSAFDDNFLTVLRNALIAHGQSLPNVNVQME 57 Query: 62 SANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADI 121 A + Q SQ++N I GV +++ P + + K A + ++ +R + D Sbjct: 58 DAQNDVARQQSQVQNFIASGVSAIIVNPVDTDATEAISKLAADAKVPLVYVNRQPANVDR 117 Query: 122 ----DFYISFDNEKVGELQAKALVDIV---PQG---NYFLMGGSPVDNNAKLFRAGQMKV 171 +I+ D G LQA+ + ++ +G N +M G + ++ V Sbjct: 118 LPETQAFIASDEAVSGTLQAQEVCRLLKARGKGKSANVVVMMGQLSNQASRQRTKDVHDV 177 Query: 172 LKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALS 231 + + +KVV +Q W A+ +M N L+A + DAV+A+ D A GAIQA+ Sbjct: 178 IAT-PECAFMKVVEEQTA-NWQRTEAMNLMSNWLSA-GIQFDAVIANADEMAIGAIQAMR 234 Query: 232 AQGL-SGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKAD 290 + GL ++G D GI+ + G +TV++ A + A+ L G++ Sbjct: 235 SAGLPVKDYIVAGIDGGRDGIELMRQGYLDVTVFQDAAGQGAGALDTALMLARGKK---- 290 Query: 291 TTLNNGLKDVPSRLLTPIDV 310 + VP +L+TP +V Sbjct: 291 ---TDRTIWVPFQLITPTNV 307 >UniRef50_B2J7A7 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2J7A7_NOSP7 Length = 318 Score = 239 bits (611), Expect = 9e-62, Method: Composition-based stats. Identities = 60/306 (19%), Positives = 113/306 (36%), Gaps = 13/306 (4%) Query: 3 IKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLG--AKVFV 60 + ++ L+ + +G + + + + ++A + Sbjct: 7 FSAYVAIAISAFSLSGCIREKTKKIVGFSQTENIGPWRIAETNSIKEEAAKHKKTYDFLI 66 Query: 61 QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI---N 117 A G Q + IE++I R VDV+ + P + L+ ++ A+ I + DR Sbjct: 67 TDAQGQTSKQFADIEDLIARQVDVIFLAPREYEGLTPALEAARAAKIPIFLIDREAAGRP 126 Query: 118 DADIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYV 176 ++ D G + L + + + G+ + A G + Y Sbjct: 127 GEHFVSFLGSDFIAQGRRVGEWLAKATDGKASIVELTGTAGSSVAIDRAKGFRNAIATYP 186 Query: 177 DSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS 236 + +K++ Q D + A+++MEN + A + I AV A ND A GAIQAL + G+ Sbjct: 187 N---MKIIATQTAD-FSRAAAVRVMENIIQAKGSDITAVYAHNDEMALGAIQALKSAGMK 242 Query: 237 --GKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLN 294 V + D A ++ I G ++V E G++ L Sbjct: 243 PGKDVMVGSIDGQKAALEAIIRGELGVSVESNPR-FGPLVFATMEEYFAGKKIPPRIILK 301 Query: 295 NGLKDV 300 + L DV Sbjct: 302 DRLFDV 307 >UniRef50_D1ANT2 Periplasmic binding protein/LacI transcriptional regulator n=3 Tax=Bacteria RepID=D1ANT2_SEBTE Length = 330 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 72/315 (22%), Positives = 133/315 (42%), Gaps = 34/315 (10%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVK-------------------IGMAIDDLRLERWQ 41 MK + L T LL + +E K I + + L W Sbjct: 1 MKNIMKIFLLLTMFLLVSCGGAKEEAKTEDGNEPAKTEQKAEGQAEIAIVLKTLSNPFWV 60 Query: 42 KDRDIFVKKAESLGAKVFVQSA--NGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVV 99 + ++ K+A + G KV + +A + + Q+ IEN++++G + I P + + Sbjct: 61 EMKEGIEKEAAAQGIKVDIIAASSEEDVQEQLRLIENLLSKGYKAIGIAPLSPVNTIPAI 120 Query: 100 KEAKQEGIKVLAYDRMIN-------DADIDFYISFDNEKVGELQAKALVDIVPQGN-YFL 151 EA ++GI V+ D ++ + +++ DN KVG A+ ++ +P+G + Sbjct: 121 VEANKKGIYVVNIDEKVDMEQLKKSGGSVLAFVTTDNVKVGAKGAEYIIGKLPEGGEVAI 180 Query: 152 MGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNK 211 + G + + + R G + K K K+V Q D W AL + N + N Sbjct: 181 IEGKSGNASGEFRRQGATEAFKA---DSKFKLVASQPAD-WDRSKALDVAANLIQKYPN- 235 Query: 212 IDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLA 271 + A+ A ND A GA+QA++ G +G++ + G D I G TV + ++ Sbjct: 236 LKAIYACNDTMALGAVQAVANAGKTGQILVVGTDGAPEARTSIDEGKLNATVAQDPAMIG 295 Query: 272 NTAAEIAVELGNGQE 286 T+ +I +E + Sbjct: 296 ATSLKILIEAIKDKP 310 >UniRef50_C6CIQ9 Periplasmic binding protein/LacI transcriptional regulator n=37 Tax=Gammaproteobacteria RepID=C6CIQ9_DICZE Length = 312 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 75/319 (23%), Positives = 136/319 (42%), Gaps = 18/319 (5%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFV 60 MK K +L + +++ A A+ +I + +L + + VK A+ LG + V Sbjct: 1 MK-KITILAAAMAFTMSSGLAQAQNEQIVFSTPNLAMPFEVHMQRTAVKAAKELGVNLQV 59 Query: 61 QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD 120 + G+ Q++ +EN I RG V+ P + +S V E + + V+ DR + Sbjct: 60 LDSQGSSPKQVADLENAITRGAQGFVVSPNDVNAVSGAVTEIQDAKLPVVTLDRSVKTDK 119 Query: 121 IDFYISFDNEKVGELQAKALVDIVPQG-NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSG 179 + +N K G+ + P G + L+ G P ++ G LK Sbjct: 120 KVPHFGANNYKGGQAIGDFVKARFPNGADIVLLTGQPGSSSNIERTQGIRDSLKA--GGS 177 Query: 180 KIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS-GK 238 K ++V DQ W+ ++I+E+ L + + ++++ND A GAI+AL +QGL G+ Sbjct: 178 KYRLVADQ-TGNWMRSEGMRIVESVLPSLPKRPQVILSANDDMALGAIEALQSQGLKPGE 236 Query: 239 VAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLK 298 V ++G DA + R+ G T + + +L N K+ T + Sbjct: 237 VMVTGFDAVPEALARVRDGWLAATADQRP---GYAVTQAMTQLTNNIRTKSAITGAD--- 290 Query: 299 DVPSRLLTPIDVNKNNIKD 317 P + K+N+ D Sbjct: 291 ------YPPTMITKDNLND 303 >UniRef50_D1AQW5 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AQW5_SEBTE Length = 313 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 63/314 (20%), Positives = 131/314 (41%), Gaps = 24/314 (7%) Query: 3 IKNILLTLCTSLLLTNVAAHA---------------KEVKIGMAIDDLRLERWQKDRDIF 47 +K ILL L T L + + + K IG+++ + + +D Sbjct: 1 MKKILLVLVTMLFIFSCGSKDQAAGKTEDKPTETGEKTYTIGVSLLTQQHPFYLSLKDAI 60 Query: 48 VKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGI 107 K+A + K+ V AN + Q+S IE+ I + VD ++I P + + + VK+A+ I Sbjct: 61 EKEAAAQNVKLNVSIANQDLNKQISDIEDFITKKVDAIIISPVDSKGVLAAVKKAEAANI 120 Query: 108 KVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRA 166 V+ D D+ +++ DN G++ + + ++ +G ++ P ++ Sbjct: 121 PVITVDVPAIGVDVAAHVATDNYTGGKIAGEEMARLLNGKGEVAVIEY-PTVDSVVQRIE 179 Query: 167 GQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGA 226 G +V+ Y D IK+V Q G AL +N + AN N + + D A A Sbjct: 180 GFKEVIAKYPD---IKIVAIQ--AGITRPEALTAAQNMIQANKN-LGGIFGFGDDAALAA 233 Query: 227 IQALSAQGLSGKVAISGQDADLAGIKRI-AAGTQTMTVYKPITLLANTAAEIAVELGNGQ 285 + A+ + G ++ + G D + + + + + A + +++ G+ Sbjct: 234 VAAVKSAGKEDQIKVIGFDGMQEARDAVTKEKSFAAVITQYPEDMGKIAVDTTLKILKGE 293 Query: 286 EPKADTTLNNGLKD 299 + + + + G+ Sbjct: 294 QVEKNIPVTPGIFT 307 >UniRef50_A1R5X6 D-ribose-binding protein n=1 Tax=Arthrobacter aurescens TC1 RepID=A1R5X6_ARTAT Length = 328 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 79/316 (25%), Positives = 128/316 (40%), Gaps = 25/316 (7%) Query: 9 TLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEE 68 T C K KI + + E KA+ LG +V V A G+ Sbjct: 21 TGCAPSAAQEANDGTKTKKIAVLLYSQSFEFMVALGQGVKDKAKELGVEVTVLDAKGDSS 80 Query: 69 TQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFD 128 TQ+SQI++ + +GVD +V+ P N L V+ G V D +I D ++FD Sbjct: 81 TQISQIQDQLAQGVDGIVLSPNNSAELVPGVQMIHDAGKTVTTVDSVIPGDIADAAVAFD 140 Query: 129 NEKVGELQAKALVDIVP-QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQ 187 NEK G+L A+AL ++ +G G+ +A L G +K + IKV+G Sbjct: 141 NEKAGKLGAEALAKLMGEKGTVLEYQGAKGAYHAILRGKGFNDGIKQFP---GIKVIGRD 197 Query: 188 WVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS------GKVAI 241 W +NAL + + TA++ I+ + + ND G + LS + + Sbjct: 198 --AQWTADNALSLTVDNFTADS-SINGLFSHNDEMVRGIVSGLSQINKDAPVGAANHIPL 254 Query: 242 SGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVP 301 G D + RI G Q T+ + + A + V+L +G++ Sbjct: 255 VGVDGTPLALDRIRNGVQDATMDQNPFEMGALALQAQVDLLDGKQVPKM----------- 303 Query: 302 SRLLTPIDVNKNNIKD 317 +L + K N+ D Sbjct: 304 -QLTDTKLITKENVDD 318 >UniRef50_A8RZI4 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RZI4_9CLOT Length = 347 Score = 238 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 63/297 (21%), Positives = 131/297 (44%), Gaps = 16/297 (5%) Query: 21 AHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINR 80 + K G A + + ++ + + G ++ V A + + Q+S +E+++ + Sbjct: 63 GGKEHYKFGFAATTMNNPFFHAIQEAIEEVVDENGDELIVIDAQNDAQKQISMVEDLLTQ 122 Query: 81 GVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD-IDFYISFDNEKVGELQAKA 139 G+D+L + P + + + +++ + G+ V+ +D + D D ++ I DN GEL A+ Sbjct: 123 GIDLLFLCPIDSASIKSSLEQCGKAGVPVVNFDTDVYDVDLVNTIIVSDNYYAGELVAED 182 Query: 140 LVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALK 199 ++ +P+G+ + SP + G Y K+V + G +L Sbjct: 183 MMKKLPEGSKVCILTSPSAEACIKRQNGFKDKADGY-----FKIVSEIDGKG-DTATSLG 236 Query: 200 IMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQ 259 I E+ L N + + A A ND +A G +QAL +Q + V + G D G + I+ GT Sbjct: 237 IAEDVLQGNPD-LGAFYAINDPSAIGCVQALESQKKTD-VLVYGVDGQPMGKQAISEGTM 294 Query: 260 TMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIK 316 T + + + A ++ +G+ + + VP+ L+ +V + + Sbjct: 295 EATAAQSPINIGKESVAAAYKILSGESVEKN-------ILVPTFLIDKNNVTEYGLD 344 >UniRef50_B9JQF4 Sugar-binding transcriptional regulator, LacI family n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JQF4_AGRRK Length = 337 Score = 238 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 76/338 (22%), Positives = 143/338 (42%), Gaps = 23/338 (6%) Query: 1 MKIKNILLTLCTSLL------LTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVK--KAE 52 M + L T++L LT A+AK KI + L E D Sbjct: 1 MNMTKRALLGATTVLCLLGTALTGAPAYAKTFKIAAIVQSLNTEYNVLWADAAKSHPALA 60 Query: 53 SLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAY 112 A + V + TQ + + I D ++ IP + + ++ AK GI V Sbjct: 61 DGTATLTVLDGRQDVLTQSNLFDTAITEKYDAIIFIPVDIDAGNEPIERAKAAGIPVFGS 120 Query: 113 DRMINDAD-IDFYISFDNEKVGELQAKALVDIVPQ-GNYFLMGGSPVDNNAKLFRAGQMK 170 + +++ + D YI+ ++ + GE+ AKA++D + ++ G + G Sbjct: 121 NTVVSKTELYDAYINSNDVEAGEMLAKAVIDKAGKDAKVVVLEGMLGQSAQVQRLEGINN 180 Query: 171 VLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQAL 230 VLK + + ++ +Q W A+ +MEN LT++ +++ V+A ND A GAI+ + Sbjct: 181 VLKQ---NSGVTIL-EQNTANWSRAEAITLMENFLTSHGDQVQGVLAENDEMAVGAIEGI 236 Query: 231 SAQGLS-GKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQ--EP 287 GL K+ ++G D ++ + G QTM++ + + + A ++A+ G +P Sbjct: 237 RNHGLDPKKLPVAGVDGIKDALEAVKRGEQTMSILQDASGQSQGAIDLALSKLVGDTYKP 296 Query: 288 KADTTLNNGLK------DVPSRLLTPIDVNKNNIKDTV 319 +A NG K + + V +N+ + Sbjct: 297 RAKVWDTNGGKLAWNGGKEEHYYVPWLAVTSDNVDKVL 334 >UniRef50_A7V0S7 Sensor protein n=6 Tax=Bacteroides RepID=A7V0S7_BACUN Length = 919 Score = 238 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 70/312 (22%), Positives = 134/312 (42%), Gaps = 14/312 (4%) Query: 1 MK---IKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAK 57 M+ ++ + L + + +IG++ R Q + +I + + Sbjct: 1 MRQHNLRILFFLLVLWGVAVACSRREARFRIGVSQCSEDEWRRQMNSEILREAHFYEDVE 60 Query: 58 VFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIN 117 V +++A + + Q I +I GVD+L++ P ++ VV+EA GI V+ DR I Sbjct: 61 VDIRTAVDDNDRQAKDIRELIAEGVDLLIVAPNEATPITPVVEEAYNRGIPVIVVDRKIL 120 Query: 118 DADIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYV 176 Y+ DN ++G+ + + +++ QG+ + G A G +K + Y Sbjct: 121 SDKYTAYVGADNYEIGKAVGEYVANVLHGQGDVVEISGLVGSTPAVDRHQGFVKAISAYP 180 Query: 177 DSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS 236 I+++ + WL A + M+ L+ ID V A ND A GA A + +G Sbjct: 181 ---GIRLLAVEDGA-WLQLKAGEKMDTLLSRFP-HIDLVYAQNDRMAAGAYAAAAREGRE 235 Query: 237 GKVAISGQDADLA---GIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTL 293 + G DA G++++ AG T P + +IA+++ N ++ +T L Sbjct: 236 KDMRFIGIDALSGKDYGVEKVLAGELDATFIYPTG--GDRVMQIAMDILNKRDFPRETIL 293 Query: 294 NNGLKDVPSRLL 305 + D + L+ Sbjct: 294 GTSVVDRDNALI 305 >UniRef50_Q1R0N3 Periplasmic binding protein/LacI transcriptional regulator n=49 Tax=Proteobacteria RepID=Q1R0N3_CHRSD Length = 318 Score = 238 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 77/322 (23%), Positives = 130/322 (40%), Gaps = 18/322 (5%) Query: 1 MKIKNILLTLCTSL--LLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKV 58 MK K +L+ LL + A+ + + + ++D W + I + AE LG + Sbjct: 3 MKGKRLLIAALAVGVPLLASGASAQDKGLMSIIVNDTSNPYWFTEGKIAEETAEKLGYEA 62 Query: 59 FVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIND 118 V S G+ T+ QI+ I + +++ P N V++A + GI V + IN Sbjct: 63 DVSSHKGDTNTESRQIDTAITNQAEAIILDPANADGSIGAVRKAVEAGIPVFIINAEINQ 122 Query: 119 ADID-FYISFDNEKVGELQA-KALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYV 176 + + +N + L A + + + Y + G+P DNNA G VL Y Sbjct: 123 QGLAEAQLVSNNAQGAALGAQQWIKSVGDSARYVELKGAPSDNNAATRSNGYETVLSQYP 182 Query: 177 DSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS 236 ++ VG W ++ L AN + ID V++ ND A GAI AL G Sbjct: 183 ---GLEKVGSDVA-NWDRTQGFNKTQSMLQANPD-IDGVISGNDEMALGAISALKEAGKL 237 Query: 237 GKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNG 296 V + G D ++ + AG TV +P+ + + A +A + T Sbjct: 238 DDVVVGGFDGSPDAVEAVKAGEMDYTVLQPVAIFSEMAVRMADKYV---------TTGET 288 Query: 297 LKDVPSRLLTPIDVNKNNIKDT 318 D +L + +N+ D Sbjct: 289 GVDGEKQLFDCFLITSDNVDDY 310 >UniRef50_A9FWH4 LACI-type transcriptional regulator n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FWH4_SORC5 Length = 332 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 60/295 (20%), Positives = 115/295 (38%), Gaps = 16/295 (5%) Query: 16 LTNVAAHAKEVK------IGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEET 69 ++ A ++ K +G + +AE ++ Sbjct: 30 ASSAEAAGRKPKALTEIVVGFSQTGAESSWRIAHSKSIQAEAEKRHVQLLFADGQNVHNN 89 Query: 70 QMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIN-DADIDFYIS-F 127 Q++ + I +GVDV+VI P +KEAK+ GI V+ R ++ + D+ + Sbjct: 90 QVNAVNGFITKGVDVIVIAPQESVGWKPTLKEAKRAGIPVVLTSRGVDAEEDLYETVMVA 149 Query: 128 DNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGD 186 D G + L + + G+P + A + + G + + + D +K++ Sbjct: 150 DFVWEGRRAGEWLAKQTNGKARIIELVGTPAADVAVMRKTGFAEAIAKHPD---MKIIAS 206 Query: 187 QWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSG--KVAISGQ 244 Q D + +ME L+A+ +I+AV A ND A GAIQA+ A GL + + Sbjct: 207 QSGD-FTRTKGKTVMETLLSAHKGEINAVYAHNDDMALGAIQAIQAAGLKPGQDILVISI 265 Query: 245 DADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKD 299 DA + + G TV + + ++ G++ T + + + Sbjct: 266 DAVKPAFEAMMEGKLNATVECNP-MHGPLLFDTIDKIVRGEKVPKRTIVPGQIFE 319 >UniRef50_Q47NL4 Solute-binding protein n=26 Tax=Actinomycetales RepID=Q47NL4_THEFY Length = 372 Score = 237 bits (606), Expect = 4e-61, Method: Composition-based stats. Identities = 112/329 (34%), Positives = 179/329 (54%), Gaps = 22/329 (6%) Query: 18 NVAAHAKEVKIGMAIDDLRLERWQK-DRDIFVKKAESL--GAKVFVQSANGNEETQMSQI 74 A+ + IG+ + + + R++K DR F + L +V Q+A+ + Q +Q Sbjct: 34 AAASIDEGFTIGLLLPESKTARYEKFDRPYFEEAVAELCPKCEVSYQNADQDVSKQQAQA 93 Query: 75 ENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGE 134 E M+ G VLV+ + + ++V++AK +G+ V+AYDR+ +D+Y+SFDN+ VG Sbjct: 94 EAMLTEGASVLVLDAVDAKAAGSIVQQAKAQGVPVIAYDRLAEGG-VDYYVSFDNKTVGR 152 Query: 135 LQAKALVDIV------PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQW 188 +Q AL++ + +G ++ GSP D NA F+AG ++L G++++ + Sbjct: 153 VQGTALIEGMEKAGTAGEGQVIMINGSPTDPNAADFKAGAHEILD-----GQVEIGAEYD 207 Query: 189 VDGWLPENALKIMENALTANN-NKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDAD 247 W P+ A + ME A+TA + I V ++ND A G I AL A G+ I+GQDA+ Sbjct: 208 TPDWSPDKAQQQMEQAITAVGADNISGVYSANDGMAAGIIAALKAAGVDEMPPITGQDAE 267 Query: 248 LAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADT------TLNNGLKDVP 301 LAGI+RI +G Q MTVYK I A AA +AV G++ + + +P Sbjct: 268 LAGIQRIISGDQYMTVYKAIRPEAEVAAAMAVAAATGEKYEGSQEHPLTEVTDEAGNTIP 327 Query: 302 SRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 + LL PI V +NI+DTVI DGF+ E+ Sbjct: 328 AVLLEPIAVTADNIEDTVISDGFYTIEEI 356 >UniRef50_D0LRU4 D-xylose transporter subunit XylF n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LRU4_HALO1 Length = 374 Score = 237 bits (606), Expect = 4e-61, Method: Composition-based stats. Identities = 116/327 (35%), Positives = 189/327 (57%), Gaps = 18/327 (5%) Query: 19 VAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMI 78 A +K+G + ++ ER+Q+D+ F+ KA+SLGA+V SAN NE+TQ+S+ E M+ Sbjct: 45 TPAEEGPLKVGFLLKTMQEERYQRDKKAFIDKAQSLGAEVLFDSANNNEQTQLSKFETML 104 Query: 79 NRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAK 138 +G V+V+ P N N+VK A +EG++V+ YD M+ + +D + D+ VG+LQ + Sbjct: 105 AQGAKVIVLQPVNTGTAGNMVKMANEEGVRVVGYDSMLVNGPLDVQVMQDSWAVGKLQGE 164 Query: 139 ALVDIVP-------QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDG 191 A+V+ + +G L+ G P D+NA G + ++ + +++V ++ +G Sbjct: 165 AMVEWLKAKNDGKVEGKVALIKGQPGDSNANAMSEGALTIINE---NEGLELVAEESHEG 221 Query: 192 WLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSG--KVAISGQDADLA 249 W + A+ EN LT N +DA +A+N A G I AL QGL KV ++G DADL Sbjct: 222 WSSDKAMATAENVLTKYENGVDAFIANNSGMARGVIAALQNQGLDDATKVFVAGSDADLV 281 Query: 250 GIKRIAAGTQTMTVYKPITLLANTAAEIAVELGN------GQEPKADTTLNNGLKDVPSR 303 I+ +A G Q + ++K IT LA TAAEIAV L + +AD T+NNG +VP+ Sbjct: 282 NIQYVAQGKQAVEIWKKITPLAETAAEIAVTLAKSPDKPVTELVEADRTINNGAVEVPTI 341 Query: 304 LLTPIDVNKNNIKDTVIKDGFHKESEL 330 + + V K+N++DTV+ F+ + ++ Sbjct: 342 VTPVVLVTKDNVEDTVVAGEFYTKEQV 368 >UniRef50_A0LXA2 Sensor protein n=1 Tax=Gramella forsetii KT0803 RepID=A0LXA2_GRAFK Length = 907 Score = 237 bits (606), Expect = 4e-61, Method: Composition-based stats. Identities = 59/318 (18%), Positives = 124/318 (38%), Gaps = 21/318 (6%) Query: 1 MKIKNILLTLCTSLLLTNVA--AHAKEVKIGMAIDDLRLERWQKDRDIFVKKAE-SLGAK 57 MK +LL + S+L + + ++ K+G + ++ +A Sbjct: 1 MKYLKLLLFVFLSILTDSCQVKSEEEKFKVGFSQAMTTDNWRREMNKSMKLEASMHPDII 60 Query: 58 VFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIN 117 + ++ A + Q++ IE I GVDVL++ P ++ +++A GI + DR I Sbjct: 61 LEIKDAENHITNQVAHIEEFIKDGVDVLIVSPIQSIPITPAIEKAMAAGIPTIIIDRKIE 120 Query: 118 DADIDFYISFDNEKVGELQAKALVDI-VPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYV 176 + Y+ +N ++G AK ++ + + + G + A G K L Sbjct: 121 GQNFTAYVGANNIEIGRNAAKYILSHSSGKADIIEITGQEGSSPAYERSMGFKKTLDSVP 180 Query: 177 DSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS 236 + V+ W + + + L + D + A ND A GA + ++ L Sbjct: 181 ELKVRHVIK----GDWEKTSIQSKLSDLLDSVKAP-DYIFAHNDRMALGAWEVARSKSLE 235 Query: 237 GKVAISGQD---ADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTL 293 ++ I G D GI+ + T+ P + ++A ++ NG+ + L Sbjct: 236 EEINIIGVDGVFGPNGGIQLVKDNILNATILYPTGGM--ETIKLAEDILNGENVNKNNIL 293 Query: 294 NNGLKDVPSRLLTPIDVN 311 + ++ ++V+ Sbjct: 294 R-------TVIIDSVNVD 304 >UniRef50_A4TI53 Sugar ABC transporter periplasmic binding protein n=23 Tax=Yersinia RepID=A4TI53_YERPP Length = 319 Score = 237 bits (606), Expect = 4e-61, Method: Composition-based stats. Identities = 72/332 (21%), Positives = 132/332 (39%), Gaps = 20/332 (6%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFV 60 MK + I L L + +V+A A+ +KIG A L + + A+ G + Sbjct: 1 MKKRLIGLLLAGVTISMSVSA-AEPLKIGFANRTLNGAFFNGLTEYMKIHAKEKGYTLIT 59 Query: 61 QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIN-DA 119 A G+ Q++ +E+M+++G++ L++ P + Q + + AK+ G+ + D I +A Sbjct: 60 TDARGDLNKQIADVEDMLSQGINYLILNPQDPQAGLRITEIAKRAGVPTVILDSDIALEA 119 Query: 120 DIDFYISFDNEKVGELQAKALVDIVPQG--NYFLMGGSPVDNNAKLFRA----GQMKVLK 173 + + +N K L + V N + G+ + + R G + Sbjct: 120 PVITRVQANNAKNNNLIGEYAVGQFGDKPMNCIFLSGNQGNLVGQARRDNFLLGVAEAQL 179 Query: 174 PYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQ 233 + + + W W + LK ME+ + A +KI+ V + D A GAI+AL A Sbjct: 180 RKYNRTNVNFLSQGW-GNWDQQGGLKAMEDIIVAQGDKINCVYSEMDDMALGAIRALKAA 238 Query: 234 GLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTL 293 V + D G++ + G T LL +T E+ + GQ D Sbjct: 239 NKLDNVKVYAHDGYKKGLEAVKKGELQATASNNPDLLTSTVLEVIGQYQAGQTSFPDYVY 298 Query: 294 NNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFH 325 + I + K+N+ +D Sbjct: 299 -----------IPSILITKDNVDKYYKEDSIF 319 >UniRef50_D2R5M8 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R5M8_9PLAN Length = 333 Score = 237 bits (606), Expect = 4e-61, Method: Composition-based stats. Identities = 61/288 (21%), Positives = 116/288 (40%), Gaps = 10/288 (3%) Query: 18 NVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENM 77 + + +G+++ + D + G V V S + Q +Q+++ Sbjct: 43 STKGSVSKGTVGVSLLTTTNPFFNVIADNIKSELVKEGYDVEVVSGEFDVARQKNQVKDF 102 Query: 78 INRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDR--MINDADIDFYISFDNEKVGEL 135 I G +V+ P + + + ++EA GI V D + A++ +I+ DN G+ Sbjct: 103 IVAGHAAIVLCPCDSRGIGPAIQEATAAGIPVFTADIACLAPGAEVVSHIATDNLGGGKQ 162 Query: 136 QAKALVDIVP--QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYV---DSGKIKVVGDQWVD 190 A+A+++ V G ++ + L G +V+ + S I +V + D Sbjct: 163 AAEAMIEAVGSAGGKVVILD-FKAAESCILRVQGFKEVIDKHNSENPSSAITIVSELPGD 221 Query: 191 GWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAG 250 G + + K E+AL A+ + + + A ND +A GA AL + +V I G D G Sbjct: 222 G-QKDKSYKAAEDALQAHPD-LAGIFAINDPSALGARAALEKANKADQVKIVGFDGQPDG 279 Query: 251 IKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLK 298 ++ I G + + A V G+E + + GL Sbjct: 280 MQAIDEGKIFADPIQHPDQIGKRVAASIVSYFRGEEVPKEQLIPTGLY 327 >UniRef50_C0C0J1 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C0J1_9CLOT Length = 333 Score = 237 bits (605), Expect = 5e-61, Method: Composition-based stats. Identities = 72/334 (21%), Positives = 132/334 (39%), Gaps = 34/334 (10%) Query: 1 MKIKNILLTLCTSLLL--TNVAAHAKE-------------VKIGMAIDDLRLERWQKDRD 45 MK + + LC ++ L ++ KE VK+ +I ++ W+ Sbjct: 1 MKKRFLAAFLCLTMCLSLAACSSGEKEKKGSDSGDKKEESVKVAFSIPEMFSTFWEACWY 60 Query: 46 IFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQE 105 F K+A+ G + + G+ E Q+SQ+++ + +GVD + + P + + + + Sbjct: 61 GFEKQAKEYGWEATLLDPQGDLELQISQLQSQVTKGVDAIGVAPIENEAIGPALTTVNEA 120 Query: 106 GIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVPQG-NYFLMGGSPVDNNAKLF 164 G+ V DR + ++ + DN K GE A+ LV + + ++ G D Sbjct: 121 GVPVFCVDRR-GEGEVVSTLETDNVKAGEAMAEQLVKDYGEDVDVLIIQGVLSDTPTLDR 179 Query: 165 RAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAG 224 G VL+ Y + I +VG+ + E AL +N L N + +D + DA Sbjct: 180 TQGVKNVLEKYEN---ITIVGEPSAGEYSNEAALATTKNFLETNPD-LDVIFTCTDALVP 235 Query: 225 GAIQALSAQGLSGK------VAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIA 278 G + AL G +GK V I D +K I GT T + + Sbjct: 236 GIVAALKEAGKTGKVGEENHVGIYSVDGAGEVLKLIEDGTVDGTFSQYPIQFGIDTVKSM 295 Query: 279 VELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNK 312 +G + + N ++T +++K Sbjct: 296 KTYLDGGKVEEKVYYNGD-------VVTDENIDK 322 >UniRef50_A9KQP5 Periplasmic binding protein/LacI transcriptional regulator n=6 Tax=Clostridiales RepID=A9KQP5_CLOPH Length = 347 Score = 237 bits (605), Expect = 5e-61, Method: Composition-based stats. Identities = 127/304 (41%), Positives = 182/304 (59%), Gaps = 6/304 (1%) Query: 28 IGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVI 87 IGM+ D +ERWQ+DRDIFV A LGA+V VQ+A+G+ Q+ QIE I + VD +VI Sbjct: 39 IGMSFDSFVIERWQRDRDIFVATANDLGAEVNVQNASGDVNEQVRQIEYFIEKQVDAIVI 98 Query: 88 IPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDI-VPQ 146 I + + LS VVK+AK++GIK++AYDR+I +AD+D YISFDNE VG++ A A V+ + + Sbjct: 99 IGIDSEKLSTVVKKAKEKGIKIIAYDRLIMNADVDLYISFDNEAVGKMMASAFVENGLTK 158 Query: 147 GNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALT 206 G + G DNN + G V+K + I+++ D W E K + + Sbjct: 159 GKVLMFCGPMTDNNVSMIEKGFQSVIKEH----DIEILDILHADNWRAEETRKYVNEHID 214 Query: 207 ANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKP 266 + DA++ ND AG I L+ L+GKV + GQDADL +RI GTQ MTVYKP Sbjct: 215 VVK-EADAIMCGNDGLAGQTIYDLAELRLAGKVMVVGQDADLEACQRIVEGTQLMTVYKP 273 Query: 267 ITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHK 326 + LA AAE ++L G+E A + +N+G DVP L I V N+++ +I GFH Sbjct: 274 VAKLAQAAAEDTIKLVLGEELGATSEINDGSYDVPYIALETIAVTAKNLEEVIINSGFHL 333 Query: 327 ESEL 330 + ++ Sbjct: 334 KEDV 337 >UniRef50_Q28MQ8 Periplasmic binding protein/LacI transcriptional regulator n=14 Tax=Alphaproteobacteria RepID=Q28MQ8_JANSC Length = 343 Score = 236 bits (604), Expect = 7e-61, Method: Composition-based stats. Identities = 74/318 (23%), Positives = 140/318 (44%), Gaps = 24/318 (7%) Query: 1 MKI-KNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLG-AKV 58 MK+ KN + L +AA + +G+ + L E +Q AE G ++ Sbjct: 38 MKLLKNTAAAVTALALSVGMAAAQDQPTVGLIMKSLANEFFQNMMVGAEAHAEERGDYEL 97 Query: 59 FVQSANG--NEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI 116 + E+Q++ +EN I +GVD +V+ P + + + ++ A + GI V+ +D + Sbjct: 98 LAVGMQNETDFESQINAVENFITQGVDAIVVAPADSRAMVRPLRRAMEAGITVINFDVAL 157 Query: 117 NDADID------FYISFDNEKVGELQAKALVDIVPQ-GNYFLMGGSPVDNNAKLFRAGQM 169 + ++ ++ DN E+ AL + + + G ++ G+P +NA R G Sbjct: 158 DTGAMEQQGIELAFVGPDNRMGAEMAGNALGEALGEGGRVVIIEGNPGADNATQRRLGFE 217 Query: 170 KVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQA 229 + + ++++ + W E A ++ LTA+ + + V+A+ND+ A G I+A Sbjct: 218 DAIATH----GLELLESRTA-HWETEEANQVFAAMLTAHPD-LQGVMAANDSMAIGVIEA 271 Query: 230 LSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKA 289 L A G + + G DA A + I G TV + +A A ++A+E+ Sbjct: 272 LDAAGRDD-ILVVGFDAVPAVLPMIEDGRMLATVDQFGQAMAANAIDLALEVLE------ 324 Query: 290 DTTLNNGLKDVPSRLLTP 307 G P L+T Sbjct: 325 TGVDLEGWVRTPIELVTA 342 >UniRef50_C6AR66 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM1325 RepID=C6AR66_RHILS Length = 333 Score = 236 bits (604), Expect = 7e-61, Method: Composition-based stats. Identities = 74/327 (22%), Positives = 129/327 (39%), Gaps = 15/327 (4%) Query: 2 KIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESL--GAKVF 59 + I+ ++L A A ++ IG + A + Sbjct: 6 RRMLIISAGLATVLTAAPAFSADKIVIGFSQASSNSAHRNTMTKRNQAYAAEHFKDVDLI 65 Query: 60 VQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDA 119 V +A G Q+S +E+++ +G+ VL+I + ++ +K+ GI V+ +R ++ Sbjct: 66 VTNAEGKSAKQISDVESLMVQGMKVLMISAQDSAAIAPTIKQVLAAGIPVITLERSLD-I 124 Query: 120 DIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDS 178 + ++ N+ +G L K + + + +GN + G P A G + + Sbjct: 125 PVTLHVGPHNKPIGTLAGKYIAEALKGKGNVVEIKGDPAVAPAVERHEGFAEAIA----G 180 Query: 179 GKIKVVGDQWVDGWLPENALKIMENALTANN-NKIDAVVASNDATAGGAIQALSAQGLSG 237 +IKV+ + D W E ALK ME+ L +I AV A ND A GA++A+ A G Sbjct: 181 TEIKVIAETHAD-WDQEKALKFMEDTLQRFPAGQIQAVYAHNDNMAFGALRAIQAAGRDK 239 Query: 238 K-VAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNG 296 + + I G D + A I+ +A G T T A A L + Sbjct: 240 EGILIIGIDGENAAIRAVAKGDLTATFTYSTV--APEGVIAAHALATNDTAALEKLGTLT 297 Query: 297 LKDVPSRLLT--PIDVNKNNIKDTVIK 321 KD S + + K N + K Sbjct: 298 KKDDGSMEIEIASKMITKENAAEFFCK 324 >UniRef50_A6VWG6 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Proteobacteria RepID=A6VWG6_MARMS Length = 314 Score = 236 bits (603), Expect = 8e-61, Method: Composition-based stats. Identities = 81/324 (25%), Positives = 125/324 (38%), Gaps = 23/324 (7%) Query: 1 MKIKNIL--LTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKV 58 MK K L T L L + + A I + ++ + KA+ LG Sbjct: 1 MKKKTFLKSCLAATLLTLASTSVLASNGLIAIITPSHDNPFFKAGAEGADAKAKELGYDT 60 Query: 59 FVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIND 118 V S +G+ Q IE I R +++ + ++ K+ GI YDR IN Sbjct: 61 LVASHDGDVNKQNQLIETAIARQAKAVILDNADADASIGSLERLKKAGIPAFLYDREINK 120 Query: 119 ADIDFY-ISFDNEKVGELQAKALVDIVPQGN-YFLMGGSPVDNNAKLFRAGQMKVLKPYV 176 I I +N + +L + +++ G Y + G D NA++ G +L + Sbjct: 121 TGIAVTQIVSNNFQGAQLAGEKFAELMGDGGEYVELLGPESDTNAQVRSEGFHDILDNFP 180 Query: 177 DSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS 236 + K+V Q W A ME+ L AN N I V+ ND+ A GA AL A G Sbjct: 181 E---FKMVARQSA-NWSQTEAFSRMESILQANPN-IKGVITGNDSMALGAEAALQAAGRK 235 Query: 237 GKVAISGQDADLAGIKRIAAG-TQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNN 295 V I G D I G T+ +P A AE A D + Sbjct: 236 D-VFIVGFDGLDYVRDSIIKGSNIKATIMQPAYAQAQRVAEQA-----------DLYIRT 283 Query: 296 GLKDVPS-RLLTPIDVNKNNIKDT 318 G +P +L+ + ++ +N K+ Sbjct: 284 GSTGLPEKQLMDCVLIDSSNAKNL 307 >UniRef50_C3KN00 Periplasmic ribose-binding protein n=1 Tax=Rhizobium sp. NGR234 RepID=C3KN00_RHISN Length = 339 Score = 236 bits (603), Expect = 8e-61, Method: Composition-based stats. Identities = 73/329 (22%), Positives = 123/329 (37%), Gaps = 22/329 (6%) Query: 4 KNILLTLCTSLLLTNV----AAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVF 59 + I+L L S+ L A + IG ++ +Q K A+ G KV Sbjct: 8 RRIVLGLIASVALAGSLAVPAQAQEMKTIGWSVAYFDHPVYQLMMKGAEKVADEAGCKVI 67 Query: 60 VQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDA 119 + Q S I+N I +GVD +++ P L VK+ GI ++ DR + Sbjct: 68 FADGKDDPSVQASHIDNFIAQGVDGIILTPTVSDPLIPAVKKVNDAGIPLVMADRRMQTH 127 Query: 120 ----DIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKP 174 + +S+D K G + + V + +GN ++ G+P + +V++ Sbjct: 128 GQPIKWEALVSWDMVKSGTIGGEQTVKAIGGKGNIVVVEGTPGAGSTIDRGNAFYEVIEK 187 Query: 175 YVDSGKIKVVGDQWVDGWLPENALKIMENALTANNN-KIDAVVASNDATAGGAIQALSAQ 233 Y D IK++ + ++ EN L +IDA+ D G +QA+ A Sbjct: 188 YPD---IKILAKIPA-NFNRAKGQEVTENILQRFKPGEIDAIYYMADEMTFGGLQAIKAA 243 Query: 234 GLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTL 293 G G+ I D + + A A A I ++ NG+ P Sbjct: 244 GRLGEFKIISVDGQKEAMDLLRAREIDYEAIFHPDDQA-VAVRILCDIVNGRTPDLANQT 302 Query: 294 NNGLK-------DVPSRLLTPIDVNKNNI 315 G K +P T V+K+N Sbjct: 303 YEGRKMDLVEFEGMPWVRPTVYAVDKSNA 331 >UniRef50_C8P3T0 D-galactose-binding periplasmic protein n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P3T0_ERYRH Length = 360 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 69/334 (20%), Positives = 127/334 (38%), Gaps = 34/334 (10%) Query: 2 KIKNILLTLCTSLLLTNVAAHA----------KEVKIGMAIDDLRLERWQKDRDIFVKKA 51 K+ ++L +L L ++ K IG+AI R+ Sbjct: 3 KLSKLILVSLLALTLFGCSSKGGAEGNANEGGKTYNIGVAIYKFDDNFMTLYREELASYF 62 Query: 52 ESLG------AKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQE 105 + +G K+ +Q ++ Q QI N I +G D+++ + +++ AK + Sbjct: 63 KEVGEKDGNTYKLDIQDGKQDQANQTEQINNFIAQGKDLIIANMVDPTAAGSIINSAKAK 122 Query: 106 GIKVLAYDRMIND------ADIDFYISFDNEKVGELQAKALVDIVPQGNY--------FL 151 I V+ +R Y+ D + G +Q + ++ +G+ Sbjct: 123 EIPVVFINREPETQELEIWPGKTTYVGADATQSGTIQGYMIANLENKGDIDGDGSVSYIT 182 Query: 152 MGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNK 211 + G P + +AK +K L+ K + + W + NAL NK Sbjct: 183 LMGDPANVDAKQRTEYSVKGLEE--KGVKTNALAQPYQANWDTAKGQEFTANALEQFGNK 240 Query: 212 IDAVVASNDATAGGAIQALSAQGLS--GKVAISGQDADLAGIKRIAAGTQTMTVYKPITL 269 ++ V A+ND A GA+ A+ A G + + G DA I+ + G T TV Sbjct: 241 LEVVFANNDGMAVGAVTAIEAAGRKVGEDIFVVGVDAIPDAIELLKGGKLTGTVLNDHFN 300 Query: 270 LANTAAEIAVELGNGQEPKADTTLNNGLKDVPSR 303 ++TA ++A+EL G++ A + P Sbjct: 301 QSHTAVDVALELLQGKDVSAYYWHDYVGVTKPEE 334 >UniRef50_UPI0001BC53E3 D-xylose ABC transporter, periplasmic substrate-binding protein n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=UPI0001BC53E3 Length = 336 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 96/335 (28%), Positives = 179/335 (53%), Gaps = 7/335 (2%) Query: 1 MKIKNILLTLCTSLLLT--NVAAHAK-EVKIGMAIDDLRLERWQKDRDIFVKKAESLGAK 57 M K +L ++ K + KIG++ RW+++++ +A+ LG K Sbjct: 1 MLKKILLYLGVMIFFISMIGCKQANKNKGKIGVSFGVGEAIRWKQEKEYMQNRADELGIK 60 Query: 58 VFV-QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI 116 + + + +TQ +I+ +DVL+I P N +S ++K A+++ +KV++Y R+I Sbjct: 61 IEIKLNTKDKPKTQEEDCFELIDSEIDVLIITPRNVNDMSKIIKYAEKKKVKVISYARII 120 Query: 117 NDADIDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYV 176 +D Y+ +D++++G++ + L + V +GNY L+ G D NA L G ++ ++P Sbjct: 121 LKEKVDLYVGYDSKRMGQMLGQYLAEKVYKGNYILLKGDENDENANLLYEGALRYIEPIK 180 Query: 177 DSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS 236 + I V+ D + W P+ A +++ +A+ ANNNKIDA++A ND A G ++A+ ++ Sbjct: 181 N--DINVILDTSISNWSPKVAKELVTSAIKANNNKIDAILAPNDKIAEGCVEAIEELNIN 238 Query: 237 GKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNG 296 + I+G DA+L+ +KRI Q +T+Y + LA TA + A + + + + +N Sbjct: 239 RNITITGMDAELSAVKRILNEKQDVTIYMDLKELAYTAIDEAFSMIHNKPISTNAEYDNQ 298 Query: 297 L-KDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 K +PS L+T V K NI +I+ E+ Sbjct: 299 SGKKIPSHLITGRLVTKQNIDRILIESKVFTREEI 333 >UniRef50_A4IPB9 D-ribose-binding periplasmic protein n=2 Tax=Geobacillus RepID=A4IPB9_GEOTN Length = 318 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 65/327 (19%), Positives = 124/327 (37%), Gaps = 32/327 (9%) Query: 2 KIKNILLTLCTSLLLTNVAAHAK------EVKIGMAIDDLRLERWQKDRDIFVKKAESLG 55 K+ + + L LL E ++ + + L W+ + LG Sbjct: 7 KLFSTAVVLTCMALLAGCGGSKGASGGGGEERVAVVLKTLSSPYWKYVEAGAKAAGKELG 66 Query: 56 AKVFVQ--SANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYD 113 V V +A Q++ IE+ +N+ LV+ P + V++ A + VL D Sbjct: 67 VDVTVVGPNAESEVMQQINMIEDQLNQSPGALVVSPSQPDTVVPVLETAT---VPVLLID 123 Query: 114 RMINDADIDFYISFDNEKVGELQAKALVDIVPQG-NYFLMGGSPVDNNAKLFRAGQMKVL 172 + +I +N + G K L ++ +G ++ G+ + G L Sbjct: 124 TDAKLKNKTSFIGTENYEAGYEGGKLLSSLLQKGDKVAIISGALGNTATDERVKGAKAAL 183 Query: 173 KPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSA 232 + + +V +Q D A+ +MEN L NN+ + V A+ND A G ++A+ A Sbjct: 184 EE----AGMVIVAEQPADS-DKTKAMSVMENILQKNND-VKGVFAANDDMALGVLRAVEA 237 Query: 233 QGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTT 292 +GL V + G D L ++ I G T+ + + + A+ NG++ Sbjct: 238 KGLD--VKVIGTDGTLEAVESILDGKLAGTIAQNPYKMGYEGVKNALAAINGEKVDKRIN 295 Query: 293 LNNGLKDVPSRLLTPIDVNKNNIKDTV 319 + K+N ++ + Sbjct: 296 SG------------VEVITKDNAQEKL 310 >UniRef50_A1WLB7 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Bacteria RepID=A1WLB7_VEREI Length = 328 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 70/304 (23%), Positives = 128/304 (42%), Gaps = 25/304 (8%) Query: 21 AHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINR 80 AHA +KIG + L+ + + ++ A++ G ++ ANG+ Q + I++++ R Sbjct: 29 AHAAGLKIGFSQVTLQSPFYVQLKEGAEAAAKAGGDELIFLDANGDVNKQNNDIQDLLTR 88 Query: 81 GVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKAL 140 VDVL+I P N + + A++ G+ V+ DR IN + ++ DN K+G+ A+ Sbjct: 89 KVDVLIINPVNPDAVKPAIAAAQKNGVPVITVDRSINGGGVTAHLGRDNVKMGKAVGDAV 148 Query: 141 VDIVPQ-----GNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPE 195 + + + G + G R G LK K+V + + + Sbjct: 149 LAELKKKGTTRGKVIEIQGDAGGTVMAARRDGFHDALK----GSGFKIVAGPYAE-YTRA 203 Query: 196 NALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIA 255 NA+ M++ L A+ + + V A ND A GA++ L+ G V ++G D + +A Sbjct: 204 NAVTAMQDLLQAHPD-VKVVYAHNDDMAMGALKVLAEAGKKD-VFVAGVDGLSEALASMA 261 Query: 256 AGTQT-MTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNN 314 G Q T L + + A + G++ A V K N Sbjct: 262 GGDQYVATALNDPRYLGDMTVQTARAIKAGKKVPAFVDAGTKA------------VTKAN 309 Query: 315 IKDT 318 + + Sbjct: 310 VGEF 313 >UniRef50_D2Q8V2 ABC transporter (Substrate-binding protein) n=2 Tax=Bifidobacterium dentium RepID=D2Q8V2_9BIFI Length = 371 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 120/331 (36%), Positives = 183/331 (55%), Gaps = 22/331 (6%) Query: 21 AHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINR 80 A +V IG+++ + LERW+ D K+ E G KV +Q A+G + Q SQI+NM N Sbjct: 37 KDASDVNIGISMPEQMLERWKIDGSNLKKQLEGYGYKVTLQYADGKTDLQTSQIQNMANN 96 Query: 81 GVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI-NDADIDFYISFDNEKVGELQAKA 139 G+D +V+ +G ++A+ G K++AYDR+I N +D+Y +F E+VG++Q + Sbjct: 97 GMDYVVVASIDGTSTGAACEQAQSNGAKIIAYDRLIMNTDAVDYYATFSLEEVGKMQGEY 156 Query: 140 LVDIVP-----QG--NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKI-----KVVGDQ 187 + + +G N LM GSP DNNA + G VL Y SG + KV D+ Sbjct: 157 IEKALGLKDGKKGPFNVELMAGSPTDNNAGYYFKGAWSVLGKYYKSGVLQAKSGKVPADE 216 Query: 188 W------VDGWLPENALKIMENALTANNNK---IDAVVASNDATAGGAIQALSAQGLSGK 238 +D W + A MEN + + N +DAV+A NDA A G + A+ G Sbjct: 217 TEWQSIGIDNWDRQKAQNEMENRINSFYNDGTKLDAVLAQNDAEALGTVNAVEGAGWDYY 276 Query: 239 VAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLK 298 I+GQDA+ A ++ I G Q+ TVYK LA A++ +L +G+EP+A T NNG K Sbjct: 277 PVITGQDAEKANVQAIVKGKQSETVYKDTRELAKATAQMIKDLVDGKEPEAKDTFNNGTK 336 Query: 299 DVPSRLLTPIDVNKNNIKDTVIKDGFHKESE 329 DVP++LLTP+ V+K N+K+ ++ G+ + Sbjct: 337 DVPTQLLTPVSVDKTNLKEVLVDGGYISAKD 367 >UniRef50_Q3MB45 Periplasmic binding protein/LacI transcriptional regulator n=54 Tax=Bacteria RepID=Q3MB45_ANAVT Length = 343 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 73/294 (24%), Positives = 132/294 (44%), Gaps = 24/294 (8%) Query: 28 IGMAIDDLRLERWQKDRDIFVKKAESLG---AKVFVQSANGNEETQMSQIENMINRGVDV 84 +G+ + DL + K+A+ +G +V V S+ + Q +QIEN + D+ Sbjct: 62 VGVTLGDLSNPFFVVMAQGAEKEAKKIGGEDVRVTVVSSGYDLNQQFNQIENFVAANTDL 121 Query: 85 LVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIV 144 ++I + + + V +A+Q G V+A D I ADID ++ +N + GE+ + + D + Sbjct: 122 IIINAADSKGIRPAVDQARQAGKVVIAVDTAIE-ADIDATVTTNNVQAGEISCQYIADRL 180 Query: 145 -PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMEN 203 +GN ++ G P + G +KVL Y D IK++ + L++M + Sbjct: 181 KGKGNVVIVNGPP-VTSVIQRVDGCLKVLAKYPD---IKLLSKDQNAEGSRDGGLRVMSD 236 Query: 204 ALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGT--QTM 261 L KIDAV A ND + G A + I G D I+ IA+G Sbjct: 237 LLVTFP-KIDAVFAINDPSGVGVDLAANQAKRQD-FFIVGVDGAPEAIEAIASGDSLYAA 294 Query: 262 TVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNI 315 T + + TA ++ ++ +G++P++ P+ L+ + K N+ Sbjct: 295 TATQNPRGMTQTAIQVGNDILHGKKPES-----------PNILIPAKLITKENV 337 >UniRef50_Q2RKU7 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RKU7_MOOTA Length = 326 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 65/298 (21%), Positives = 119/298 (39%), Gaps = 24/298 (8%) Query: 22 HAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRG 81 + E IG+++ + +KA+ K + A+ + Q++Q+++ I + Sbjct: 50 KSGEKVIGVSLLTREHVFYNLIEKAIQEKAQGYKFKPIIMDASQDSNKQLAQVQDFITQK 109 Query: 82 VDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALV 141 VD +V+ P ++ V AK+ GI V D D+ +++ DN G+L AK Sbjct: 110 VDAIVLAPTASAGIAPAVDLAKKAGIPVFTIDIKAEG-DVKSHVATDNYAGGKLAAKYAA 168 Query: 142 DIV--PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALK 199 + V +G ++ S + G L Y + IKVV + G E A Sbjct: 169 EKVLNGKGKVAIITYSE-VQSCVDREKGFKDALAEYPN---IKVVDVENCSG-SAEKAAN 223 Query: 200 IMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAA-GT 258 + ++ L + +D + A D A GA+ + A G + V + G D + I+ I G Sbjct: 224 LTQDILLKFPD-LDLIFAVGDPFAVGAVSTIKAAGRN--VKVIGFDGNPEAIQEIKNHGL 280 Query: 259 QTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIK 316 V + + ++ + NG+ P L+ P V+ +N K Sbjct: 281 WVADVVQHPDQIGGKVIDLIADYFNGKSVP------------PQVLIPPTIVDASNAK 326 >UniRef50_UPI0001C31C00 xylose binding protein transport system n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31C00 Length = 373 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 115/316 (36%), Positives = 182/316 (57%), Gaps = 9/316 (2%) Query: 24 KEVKIGMAID--DLRLERWQKDRDIFVKKAESL--GAKVFVQSANGNEETQMSQIENMIN 79 +++ I + +D+ +F + + GAKV +A G+ Q++Q E+ I Sbjct: 46 EDLTIAFLMPCSTCADRFENQDKPLFEAAVKEIAPGAKVIANNAEGDSARQVTQTESAIT 105 Query: 80 RGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKA 139 G DV+V+ P + + + +A+Q I V++YD ++ D +DFY+SFDNE+VGELQ + Sbjct: 106 NGADVIVVSPLDEAAGAAIADKAEQARIPVVSYDGLLTDGTVDFYVSFDNERVGELQGEY 165 Query: 140 LVDIVPQG-NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENAL 198 L + G + + G + F+AG + L P ++SG++++ + + P+ Sbjct: 166 LARELRDGASIAFINGDQSIAPGRQFKAGAHRALDPLIESGRLRLAYEGDAQQFDPQKGR 225 Query: 199 KIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGT 258 +ME ALT N+++D V+A+ND AGG + AL + L+GKV ++GQDA AG++RI G Sbjct: 226 TLMEQALTRLNDRVDGVIAANDGLAGGVVNALEPRNLTGKVLVTGQDATDAGLQRILLGQ 285 Query: 259 QTMTVYKPITLLANTAAEIAVELGNG--QEP--KADTTLNNGLKDVPSRLLTPIDVNKNN 314 QTM+VYK I A AAE+AV LG G ++ A +T +NG DVPS LL P+ V ++N Sbjct: 286 QTMSVYKAIKQEAEAAAEVAVALGEGDAEKVRSMATSTTDNGAGDVPSILLEPVVVTQDN 345 Query: 315 IKDTVIKDGFHKESEL 330 I DTV DGF E + Sbjct: 346 IVDTVFADGFTTEERV 361 >UniRef50_A8F472 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Thermotoga lettingae TMO RepID=A8F472_THELT Length = 314 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 79/331 (23%), Positives = 135/331 (40%), Gaps = 23/331 (6%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKD----RDIFVKKAESLGA 56 MK I L L ++L + ++G+AI + + A Sbjct: 1 MKKVLIFLLLIVTILSFA------KFRVGVAIPAADHGWTGGMVWWAQYAIKQYANDPDV 54 Query: 57 KVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI 116 + ++ +A Q++Q++ ++ +G+D LVI PY L+ + +A ++GI + DR I Sbjct: 55 EFYLVTAKE-PSEQIAQVQALLAKGIDALVINPYESAPLTPICVQAFRDGIFTIIVDRGI 113 Query: 117 NDADIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPY 175 N + + YI+ DN G L K + + + +GN ++ G P N K L+PY Sbjct: 114 NSEEYNVYIAGDNYMYGYLAGKYIAEKLGGKGNVVVIEGIPSTINT-ERVEAFKKALEPY 172 Query: 176 VDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGL 235 + +K++ Q W E A +IM+ LT N IDAV +D G + AL G Sbjct: 173 PN---VKIIAQQP-GYWSREKAFEIMQTLLTKFPN-IDAVWTGDDDMLHGVLLALKQAGR 227 Query: 236 SGKVAISGQDADLAGIKRIAAGT-QTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLN 294 + + G + +K I G + + +TA +AV G+ Sbjct: 228 DKNIVLVGGACEKNIVKMIMDGHPLIGVDFTYPPNMISTAINLAVMALKGEHLNGFYQRG 287 Query: 295 NGLKDVPSRLLTPIDVNKNNIKDTVIKDGFH 325 K + L+ V K N KD + Sbjct: 288 IPRKII----LSTETVTKENAKDYYFPESVF 314 >UniRef50_A6C460 Ribose ABC transporter (Ribose-binding periplasmic component) n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C460_9PLAN Length = 321 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 65/307 (21%), Positives = 122/307 (39%), Gaps = 21/307 (6%) Query: 18 NVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENM 77 + + G + + + + K+ E+ G ++ + A N Q + + ++ Sbjct: 32 SDSTADSGRLFGASFQTMNNPFFVDLGEGLKKELEANGDRLVILDAQFNSLKQKNDLSDL 91 Query: 78 INRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD---IDFYISFDNEKVGE 134 I + V + + P N + L + EA ++ + ++ D + AD I ++ DN + GE Sbjct: 92 ILQNVAGIFVNPVNWEGLKGSLLEANRKKVPIIIVDAPVKKADEELIVCTVASDNVRAGE 151 Query: 135 LQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLP 194 L A+AL + P+ ++ V+ AG L+ + + +K++ Q G Sbjct: 152 LAAQALAKVNPKARLVVL-HLSVNKACIDRVAGFKTELEKHPE---MKILDVQEAQG-TT 206 Query: 195 ENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRI 254 E A +M + + + +DAV A ND A G I AL + +V I D AGIK I Sbjct: 207 EGARPVMRDLIGRYPD-LDAVFAINDPNALGVISALDSANKLDQVTIVTVDGSQAGIKAI 265 Query: 255 AAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNN 314 AG T + + AAE + G+ + D + + N Sbjct: 266 QAGKLHSTSAQFPREIGKIAAEKMLAHLKGEPVEKDVK------------VRVELITAEN 313 Query: 315 IKDTVIK 321 + + Sbjct: 314 AEQYLEP 320 >UniRef50_D1PGW4 Sensor protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PGW4_9BACT Length = 935 Score = 234 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 72/329 (21%), Positives = 130/329 (39%), Gaps = 28/329 (8%) Query: 1 MKIKN-ILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVF 59 MK K +++ + +LLT A ++ IG++ + K D E L + Sbjct: 1 MKRKLHLIIYVAIIVLLTGCAQKPRKFVIGVSQCSEDI-WRDKLNDELKM-GEYLNDSLI 58 Query: 60 VQ--SANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIN 117 V+ S+N + Q Q+ I+ GVD+L++ P +S V+ A +GI V+ YDR N Sbjct: 59 VKLASSNDDNVLQNKQVNQFIDEGVDLLIVSPNQLSAISKSVERAYDKGIPVILYDRKTN 118 Query: 118 DADIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYV 176 +I DN +G+ + + +G + G + A G M +KPY Sbjct: 119 SDKYTAFIGCDNYTIGKSMGTFIAQQLQGKGRIVEISGLEGSSPALERHRGFMDAIKPYP 178 Query: 177 DSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS 236 ++VV + W E ++ M+ L + D V A ND A GA A + Sbjct: 179 ---GLQVVASEE-GNWKEEGGIQAMKRILKQTQD-FDYVFAHNDCLAWGAYVAARQMRVK 233 Query: 237 GKVAISGQDADL---AGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTL 293 +G D G++ + G + P + +A+++ Q + D L Sbjct: 234 RNYKYTGVDGMATEGGGLELVRDGIFEASYLYPTK--GDEVIALAMKILKHQPYERDNYL 291 Query: 294 NNGLKDVPSRLLTPIDVNKNNIKDTVIKD 322 + + + + N T+++ Sbjct: 292 STSI------------ITQANAALTLMEA 308 >UniRef50_C1RNE3 Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=4 Tax=Actinobacteria (class) RepID=C1RNE3_9CELL Length = 376 Score = 234 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 118/370 (31%), Positives = 190/370 (51%), Gaps = 42/370 (11%) Query: 2 KIKNILLTLCTSLL--LTNV-------------AAHAKEVKIGMAIDDLRLERWQKDRDI 46 K I + LL L A +++ +G+A+ LERW +D Sbjct: 6 KKSAIAMVAAGMLLGSLAACSSEREPTTEGTGDAGSSEDTVVGIAMPTKALERWNRDGAH 65 Query: 47 FVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEG 106 + G + +Q A+ + Q++Q+ENMIN+G D+LVI +G L+ +++A ++G Sbjct: 66 LEGLLQDAGFETSLQFADNKVDQQITQLENMINQGADILVIASIDGTALAPTLEQAAEQG 125 Query: 107 IKVLAYDRMIND-ADIDFYISFDNEKVGELQAKALVDIV------PQGNYFLMGGSPVDN 159 I V+AYDR+IND ++D+Y +FDN VG++Q + +V+ + N GSP DN Sbjct: 126 ITVIAYDRLINDTPNVDYYATFDNYGVGKMQGEFIVEQLDLAGGAGPFNLEPFAGSPDDN 185 Query: 160 NAKLFRAGQMKVLKPYVDSGKIKVVGDQW-----------VDGWLPENALKIMENALTAN 208 NAK F AG VLK YVDSG++ V + V GW + A MEN L + Sbjct: 186 NAKFFFAGAWDVLKEYVDSGQLVVPSGKAPASNDDWQSIGVQGWSSDTAQSEMENRLNSF 245 Query: 209 ---NNKIDAVVASNDATAGGAIQALSAQGLS---GKVAISGQDADLAGIKRIAAGTQTMT 262 K+D V++ ND+ A G QAL+ G + ++GQDAD A + + G Q+M+ Sbjct: 246 YAGGTKVDVVLSPNDSLALGIAQALAGNGYAPGPDYPILTGQDADKANVLNMIEGKQSMS 305 Query: 263 VYKPITLLANTAAEIAVELGNGQEPK--ADTTLNNGLKDVPSRLLTPIDVNKNNIKDTVI 320 V+K L + A + ++ G E + + T +NG K VP+ LL P + + ++ T++ Sbjct: 306 VWKDTRTLGDRTATMIEQIVAGDEVEVNDEETYDNGEKVVPTYLLPPQVITPDTVQ-TLV 364 Query: 321 KDGFHKESEL 330 GF+ ++L Sbjct: 365 DSGFYTAADL 374 >UniRef50_D1QRT0 Putative DNA-binding response regulator/sensor histidine kinase n=1 Tax=Prevotella oris F0302 RepID=D1QRT0_9BACT Length = 522 Score = 234 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 72/326 (22%), Positives = 137/326 (42%), Gaps = 21/326 (6%) Query: 2 KIKNILLTLCTSLLLTNVAA-HAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFV 60 KI + +LT L++ + + ++K+ IG++ + R + ++++ G + Sbjct: 3 KISSFILTFMGCLMICSCNSRNSKQYVIGVSQCSEDIWRDKLNQELQTATYMEDGVTMRF 62 Query: 61 QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD 120 SA+ N++ Q+ QIE I GVD+L+I P ++ VV +A ++GI V+ +DR + Sbjct: 63 ASADDNDKRQIQQIEQFIKDGVDLLIISPNQAHAITPVVDKAVEKGIPVILFDRKADG-K 121 Query: 121 IDFYISFDNEKVGELQAKALVDIVP-QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSG 179 +I DN +VG + + GN + G + A G ++ + Y Sbjct: 122 YTAFIGADNVEVGRQMGDYVARQLDYHGNVIELMGLKGSSPAIERHRGFIERISRYP--- 178 Query: 180 KIKVVGDQWVDGWLPENALKIMENALTANNN----KIDAVVASNDATAGGAIQALSAQGL 235 IK+V D W + + ++ + I V A ND A GA GL Sbjct: 179 GIKLVESLQGD-WTKASGRRAIQAFSQRHGTASCATIACVFAQNDRMAMGA----REAGL 233 Query: 236 SGK-VAISGQDADL---AGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADT 291 K G DA G+K +A + + P + ++A+ + N + + + Sbjct: 234 LPKSTLFCGVDALPGEQGGMKLVADSVLSASYIYPTR--GDLVMKLAMNILNHRPYQKEN 291 Query: 292 TLNNGLKDVPSRLLTPIDVNKNNIKD 317 L + L L + ++ N++ Sbjct: 292 LLQSALVTPDKAPLMLMQADEMNMQQ 317 >UniRef50_A1WJI7 Periplasmic binding protein/LacI transcriptional regulator n=102 Tax=Proteobacteria RepID=A1WJI7_VEREI Length = 358 Score = 234 bits (598), Expect = 3e-60, Method: Composition-based stats. Identities = 70/316 (22%), Positives = 131/316 (41%), Gaps = 18/316 (5%) Query: 17 TNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKK--AESLGAKVFVQSANGNEETQMSQI 74 K K+G A+ L+ E Q + K + K+ V + TQ +Q Sbjct: 44 ALAQQAKKTWKVGAAVYGLKAEFAQLWVNALKKHPLVKDGTVKLTVFDGKYDALTQNNQF 103 Query: 75 ENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGE 134 E MI + D ++ +P + Q ++ V +A + I V+ + +N + Y+ ++ G Sbjct: 104 ETMITQKYDGILFVPIDLQAGADAVSKAAEANIPVVGSNGRVNSDKLLSYVGSNDVIAGA 163 Query: 135 LQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWL 193 +QA+A+VD + +GN ++ G + R G + VL Y + V + W Sbjct: 164 MQAQAVVDAMGGKGNVVILEGPIGQSGQVERRQGNLSVLAKYPNVK----VLEMKTANWS 219 Query: 194 PENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGK-VAISGQDADLAGIK 252 AL + EN LTA+ KI+ ++ ND A GAI+A+ A+GL K + +G D ++ Sbjct: 220 RAEALSLTENWLTAHAGKINGIIGQNDEMALGAIEAVKAKGLDPKTIPTAGIDGVSDAVR 279 Query: 253 RIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRL-------- 304 + AG +V + + + A ++ + G K + + + Sbjct: 280 AVKAGIM-ASVLQDASAQSQGALDVLLRKLIGASYKPRSAMWAQYGAAGLQWDDGAARAY 338 Query: 305 -LTPIDVNKNNIKDTV 319 + + N + Sbjct: 339 NIPWTPITLQNADALL 354 >UniRef50_C9LWW5 Sugar ABC transporter, periplasmic sugar-binding protein n=2 Tax=Selenomonas RepID=C9LWW5_9FIRM Length = 347 Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats. Identities = 68/296 (22%), Positives = 123/296 (41%), Gaps = 20/296 (6%) Query: 27 KIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLV 86 K+ A + + ++ F +KA+S G V A G+ Q+ Q+ I+ +V Sbjct: 70 KVIYANHNDDDAFAMQLKNTFAEKAKSAGLDVEFLDAKGDSNLQIDQLNEAISNKAAAIV 129 Query: 87 IIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIV-P 145 ++ +G + V++A++ GI V+ +R +ND + + D+ + G +Q + + + P Sbjct: 130 LLAMDGTSIVPTVEKAREAGIPVVIMNRDVNDPKVIGSL-SDDREAGRMQGEFMASHLPP 188 Query: 146 QGNYFLMGGSPVDNNAKLFRAGQMKV-LKPYVDSGKIKVVGDQWVDGWLPENALKIMENA 204 + G + A G + L D +K++ W +K M Sbjct: 189 NAKVVYLMGESSLSVAVKRWEGFKEACLDKRPD---VKLLASVD-GSWSKAEGMKAMTLW 244 Query: 205 LTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVY 264 L + +I+ VVA+ND A GAIQAL A ++G DA AG+ + AG + TV Sbjct: 245 L-SFFPEINGVVAANDEMALGAIQALKAANRLNGCLVTGVDATPAGLAAVEAGELSQTVK 303 Query: 265 KPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTVI 320 + A A + +G+ P D+P + + N+ V Sbjct: 304 QDAEGQAAGAVTLVQGFLSGKAP-------TESLDIPF-----TSITRENVAQFVK 347 >UniRef50_D1AIH6 Galactose-binding protein n=3 Tax=Bacteria RepID=D1AIH6_SEBTE Length = 353 Score = 234 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 73/359 (20%), Positives = 130/359 (36%), Gaps = 47/359 (13%) Query: 1 MKIKNILLTLCTSLLLTNVAAHA----------------KEVKIGMAIDDLRLERWQKDR 44 MK + L +LL + KE+KIG+A+ + Sbjct: 1 MKKFRWTMILSIIMLLISCGNGGEKPAAGGEAPAGGEAKKEIKIGVALYKFDDTFISSVK 60 Query: 45 DIFVKKAESL------GAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNV 98 D + ++ + G + TQ Q++ I +G DV+ + + S + Sbjct: 61 DAINEISDEKSKETGEKITINAVDGQGQQATQNDQVDTFITQGYDVIAVNMVDRTAASVI 120 Query: 99 VKEAKQEGIKVLAYDRMINDADID-----FYISFDNEKVGELQAKALVDIV--------- 144 +++A+ GI V+ ++R D+ +Y+ E+ G +Q + D Sbjct: 121 IQKAQAAGIPVVFFNREPVAEDMAKWDQLYYVGAKAEESGTIQGEVAADYFKANPDADKN 180 Query: 145 --PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIME 202 + Y ++ G P +A L +K L+ ++ + W N + M Sbjct: 181 KDGKIQYVILEGEPGHQDALLRTEYSIKALEAA--GFQVDKLASDTA-LWQRANGQEKMA 237 Query: 203 NALTANNNKIDAVVASNDATAGGAIQALSAQGLSGK---VAISGQDADLAGIKRIAAGTQ 259 ++A +KI+ V+A+ND A GAI+AL A G + + G DA + AG Sbjct: 238 AWISAFGDKIELVLANNDDMALGAIEALKAAGYLSDGKFIPVIGVDATAPAKDSLKAGLL 297 Query: 260 TMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDT 318 TV +IA L + P G+ D + V K N+ Sbjct: 298 YGTVLNDARGQGKGIFDIAYALAKKENPAEKVQ---GITDGKYLWIPYQKVTKENVDKF 353 >UniRef50_B8I0K4 Periplasmic binding protein/LacI transcriptional regulator n=11 Tax=Clostridiales RepID=B8I0K4_CLOCE Length = 342 Score = 234 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 78/334 (23%), Positives = 131/334 (39%), Gaps = 42/334 (12%) Query: 1 MKIKNILLTLCTSLLLTNV------------------------AAHAKEVKIGMAIDDLR 36 MK K I L +C SL++ + K + IG + Sbjct: 1 MKKKLIALLMCFSLVIAAGCGASDTNSSDSESSESAQSTSANDSGSNKLITIGFSQVGAE 60 Query: 37 LERWQKDRDIFVKKA-ESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVL 95 + + E G K+ A +E Q+ + + I++ VDV+ I P Sbjct: 61 SDWRVANTASMKSALSEKNGFKLIFADAQQKQENQIKAVRDFISQDVDVIAIAPVTETGW 120 Query: 96 SNVVKEAKQEGIKVLAYDRMI---NDADIDFYISFDNEKVGELQAKALVDIVPQG----- 147 V+ EAK I V+ DRMI +D+ ++ D +K G A+ LV+ + + Sbjct: 121 ETVLGEAKDADIPVIIVDRMIKVSDDSLFSCWVGSDFQKEGVNAAEWLVNYMKEKGKTDK 180 Query: 148 -NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALT 206 N ++ G+ + G +K Y + ++ Q + ++ME+ L Sbjct: 181 QNVVVLQGTIGSSAEIGRTKGFGDTIKKYDN---FNILAQQ-TGEFTQAKGQEVMESFLK 236 Query: 207 ANNNKIDAVVASNDATAGGAIQALSAQGLS--GKVAISGQDADLAGIKRIAAGTQTMTVY 264 N+ ID V+A ND A GAI AL A G + V I DA A K + AG ++V Sbjct: 237 QYND-IDVVIAQNDNMAFGAIDALKAAGKAPGKDVTIVSFDAVKAAFKSMIAGDMNVSVE 295 Query: 265 KPITLLANTAAEIAVELGNGQEPKADTTLNNGLK 298 AE+A +L N ++ + ++ + Sbjct: 296 CNPLH-GPRVAELAKKLMNDEKVEKIQYVDEKVY 328 >UniRef50_B1ZN56 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZN56_OPITP Length = 310 Score = 233 bits (596), Expect = 5e-60, Method: Composition-based stats. Identities = 63/306 (20%), Positives = 115/306 (37%), Gaps = 20/306 (6%) Query: 19 VAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMI 78 ++ +G A + + +AE G + A N + QM + + I Sbjct: 15 CTVSQAKLTVGFAQTGSESVWRAANSESIKSEAEKQGIDLRFVDAQSNVDNQMKALRSFI 74 Query: 79 NRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD--IDFYISFDNEKVGELQ 136 VD +V+ P V+++AK GI V+ DR I +I D K G++ Sbjct: 75 ADQVDAIVLAPLVVSGWEAVLQDAKAAGIPVIIMDRKIVADPSLYATFIGSDFFKEGQMA 134 Query: 137 AKALVDIVP-QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPE 195 A+ ++ + + G P + A + + + S ++V + + + Sbjct: 135 AEWILAHADQKRKIVELQGEPGSSAANERQRAFASTMATHT-SDGFRIVARKVA-NFRRD 192 Query: 196 NALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSG--KVAISGQDADLAGIKR 253 + M LT + + I+ V A ND A GAI+A+ A G S + + DA ++ Sbjct: 193 QGRQAMAELLTTHGSDIEIVFAHNDDMALGAIEAIEAVGRSPGRDIMVVSIDAIKTAVEA 252 Query: 254 IAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKN 313 +A+G TV L E V L +G +T + I ++ + Sbjct: 253 VASGKLNCTVECNP-LFGPKVIEAVVRLTSGGTVMKETFNKD------------IVIDAS 299 Query: 314 NIKDTV 319 N + Sbjct: 300 NAAQLL 305 >UniRef50_C4G5I4 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G5I4_ABIDE Length = 342 Score = 233 bits (596), Expect = 5e-60, Method: Composition-based stats. Identities = 59/309 (19%), Positives = 124/309 (40%), Gaps = 22/309 (7%) Query: 16 LTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAES--LGAKVFVQSANGNEETQMSQ 73 + + K I L + W + +A++ G KV V + N TQ++ Sbjct: 44 SGASSGNYKGKSIAYLTPSLDVPFWCYMKHGIEDQAKNTMPGVKVTVYDSKDNANTQLAN 103 Query: 74 IENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVG 133 +++ I VD +VI P + V+ A++ GI V+ D + + +IS DN Sbjct: 104 VQDAITNKVDGIVISPTDSASCIAVLSAAEEAGIPVVICDIGTDSGEYVSFISTDNSGGA 163 Query: 134 ELQAKALVDIVPQGN-YFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGW 192 + + + D + +G+ + + N L + G + +K K+K V + ++ Sbjct: 164 KKLGEYVADKLNKGDEIAQIALNQARKNGVLRKEGFEEGIKE-----KLKEVDFRQMEKV 218 Query: 193 LPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIK 252 + ++ ++ +T+ N + + ++ + GA+ AL + K I G D ++ Sbjct: 219 NRDEGVRYTQDLITSYPN-LKCIFCHSEDPSMGAVTALKEIN-NDKCKIVGFDCSPEVVE 276 Query: 253 RIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNK 312 I +G T + + TA + +G P+ + + + + V + Sbjct: 277 AIKSGDILATAAQQPVFMGRTAVDCLKTHLDGGTPEKEIS------------VDTLLVTQ 324 Query: 313 NNIKDTVIK 321 +NI D K Sbjct: 325 DNINDVYDK 333 >UniRef50_C6PN56 Periplasmic binding protein/LacI transcriptional regulator n=3 Tax=Clostridiales RepID=C6PN56_9CLOT Length = 322 Score = 233 bits (595), Expect = 7e-60, Method: Composition-based stats. Identities = 61/297 (20%), Positives = 122/297 (41%), Gaps = 21/297 (7%) Query: 24 KEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVD 83 K+ K G + +Q + E G ++ + Q+ QI +MI +GV+ Sbjct: 39 KKHKFGYTCMTMNNPFFQVLEKSIRAEVEKNGDQLITMDPAMDVSKQIDQINDMITQGVE 98 Query: 84 VLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIND-ADIDFYISFDNEKVGELQAKALVD 142 + + P + + + ++ K+ I ++ +D + D + Y+ DN+ G++ LV Sbjct: 99 AVFLNPVDWEGVRPGLEALKKANIPIINFDTEVKDMNYVTAYVGSDNKNAGKVCGDDLVK 158 Query: 143 IVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIME 202 P G + P N+ AG + + +V +Q G + ++K+ + Sbjct: 159 RYPNGGKIAILNCPTMNSINDRIAGFKSAI----EGKNFTIVAEQDGKG-DLQTSMKLAD 213 Query: 203 NALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAA-GTQTM 261 + L ++++ I A++ ND TA GA+ A + K+ I G D K IA+ G Sbjct: 214 DILQSHSD-IVAIMGGNDPTALGALAACKSA-KQSKILIYGVDGSPDAKKEIASGGQFVG 271 Query: 262 TVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDT 318 T + + +AE+ ++ N Q + T + +NK+N+ Sbjct: 272 TGAQSPKQIGVKSAELGYKVLNKQNVEKKTPVQT------------FLINKDNVSKY 316 >UniRef50_A6X2R7 Periplasmic binding protein/LacI transcriptional regulator n=53 Tax=Bacteria RepID=A6X2R7_OCHA4 Length = 351 Score = 233 bits (595), Expect = 7e-60, Method: Composition-based stats. Identities = 110/343 (32%), Positives = 172/343 (50%), Gaps = 21/343 (6%) Query: 1 MKI---KNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQ-KDRDIFVKKAESLG- 55 MK K + S N A K+ +G + D R++ +D F + + + Sbjct: 1 MKNILGKAAFAAVVLSSFAGNAQAEVKDAVVGFLMPDQASTRYEERDYPGFAAEMKKICE 60 Query: 56 -AKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDR 114 KV +A+G+ Q Q ++I++G V+V+ + +++VK A+ + IKV+AYDR Sbjct: 61 SCKVLYLNADGDASKQQQQFNSVISQGAKVIVLDAVDTAAAASLVKLAQSQDIKVIAYDR 120 Query: 115 MINDADIDFYISFDNEKVGELQAKALVDIVP-------QGNYFLMGGSPVDNNAKLFRAG 167 I DA DFY+SFDNE +G+ A++LV + +G + GSP D A L + G Sbjct: 121 PIPDATSDFYVSFDNEAIGKSIAESLVKHLKDKGVAGDKGGVLQINGSPTDAAAGLIKNG 180 Query: 168 QMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAI 227 LK K + + W P A + +T N++I VVA+ND TAGGAI Sbjct: 181 IHAGLKD----SGYKTLAEYDTPEWAPSKAQQWASGQITRFNDQIVGVVAANDGTAGGAI 236 Query: 228 QALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEP 287 A+ A G+ ++G DA +A ++ I +G Q T+ KP ++A AA +A +L NG+ P Sbjct: 237 AAMKAAGIDPLPPVTGNDATIAALQLIISGDQYNTINKPSEIVAAEAARVAGQLLNGETP 296 Query: 288 KADTTLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 KA+ TL N PS+L P+ V +N+K +I L Sbjct: 297 KAEATLYN----TPSKLFVPVVVTADNLKAEIIDKNIVSAETL 335 >UniRef50_C4U114 Ribose-binding protein of ribose ABC transporter n=1 Tax=Yersinia kristensenii ATCC 33638 RepID=C4U114_YERKR Length = 322 Score = 233 bits (595), Expect = 7e-60, Method: Composition-based stats. Identities = 82/320 (25%), Positives = 139/320 (43%), Gaps = 18/320 (5%) Query: 3 IKNILLTLCTSLLLTNVAAHAKE--VKIGMAIDDLRLERWQKDRDIFVKKAESLG-AKVF 59 + + + L T N A K+ V I ++ + ++ +A++LG K+ Sbjct: 8 MTTLAIALSTFAFSANAAPKGKDAPVTILVSALSYSFPHFVFLQEQLEAEAKTLGNVKII 67 Query: 60 VQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIND- 118 + Q++ IE I +GVD ++I P + L+ V++ A +EGI V+ DR +N Sbjct: 68 RSDGQLSAPKQIADIEAAIVQGVDGIIIAPADATALAPVLRTAIKEGISVVTIDRPVNGV 127 Query: 119 ADIDFYISFDNEKVGELQAKALVDIVPQG-NYFLMGGSPVDNNAKLFRAGQMKVLKPYVD 177 ++ ++ DN + Q +A+ + PQG + G P D A G L + + Sbjct: 128 PEVIANVAADNLIGAQRQGEAVEKLFPQGATIINLQGIPGDKTANDRSKGVHDTLDKHPE 187 Query: 178 SGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSG 237 K V +Q + + L + EN LT N +VA ND +A GA QA+ A+GL G Sbjct: 188 L--YKFVAEQTA-RFNRDQGLSVTENLLTGLANPPTVIVAGNDDSALGAAQAVEARGLKG 244 Query: 238 KVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGL 297 K+AI G D +K + G T TV + A +I + A + Sbjct: 245 KIAIFGYDGSTDALKAVRDGVLTGTVDQYPGKQGREAVKILTDYIRTGARPATVDV---- 300 Query: 298 KDVPSRLLTPIDVNKNNIKD 317 L++P+ + N+ D Sbjct: 301 ------LVSPVAITSKNLND 314 >UniRef50_D1BVH2 Xylose ABC transporter, substrate-binding protein n=3 Tax=Actinomycetales RepID=D1BVH2_XYLCX Length = 388 Score = 233 bits (595), Expect = 8e-60, Method: Composition-based stats. Identities = 109/341 (31%), Positives = 174/341 (51%), Gaps = 31/341 (9%) Query: 21 AHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINR 80 A A ++ +G+A+ ERW D + + E G +V +Q AN + TQ QI+ MI + Sbjct: 43 AAASDITVGVAMPTQTSERWIADGNSVREGLEEAGFEVNLQFANDDIPTQQQQIDQMITQ 102 Query: 81 GVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI-NDADIDFYISFDNEKVGELQAKA 139 G D+L++ +G L+N ++ A GI +++YDR+I + ++DFY++FDN +VG QA + Sbjct: 103 GADILIVASIDGTALANQLQAAADAGIPIISYDRLIRDTENVDFYVTFDNFQVGVDQATS 162 Query: 140 LVDIVP----QGN---------YFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGD 186 L+ + GN L GS DNNA F G M L+P++D+G + V Sbjct: 163 LLTGLGVLDADGNETGETGPFTIELFAGSLDDNNAHFFFDGAMTTLQPFIDAGTLVVGSG 222 Query: 187 QWVDG------WLPENALKIMENALTANNN----KIDAVVASNDATAGGAIQALSAQGL- 235 Q W E A + ME+ LTA+ + V++ D + G I AL G+ Sbjct: 223 QTSIDQAATLRWSQETAQRRMEDLLTAHYGGGSEPLHGVLSPFDGISRGIITALQNAGMG 282 Query: 236 ----SGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADT 291 G ++GQDA++A + I G Q T++K LLA A A +G+ P+A+ Sbjct: 283 PSIADGLPVVTGQDAEIASVALIDQGIQYSTIFKDTRLLAEQAVIAAQAFADGRTPEANN 342 Query: 292 T--LNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 T +NG+ VPS LL V ++I+ +I GF + ++ Sbjct: 343 TTDYDNGMMIVPSFLLPVSIVTADDIQSVLIDSGFFTQEQV 383 >UniRef50_B8HJG2 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HJG2_ARTCA Length = 319 Score = 233 bits (594), Expect = 9e-60, Method: Composition-based stats. Identities = 73/319 (22%), Positives = 129/319 (40%), Gaps = 22/319 (6%) Query: 3 IKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQS 62 + + L C+S A K KIG+ + D+ + + A S+GA Q Sbjct: 17 LAALSLAACSSGDTQPAAKPKKIEKIGLMVQDMSNPFFSAMDKGAKEAAASIGATANTQD 76 Query: 63 ANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADID 122 A + Q +QI+ I +GV+++VI + + ++ AKQ GI V+A D AD Sbjct: 77 AQLDLANQNTQIDTFIQQGVNLIVISAVDENGIQPAIERAKQAGIIVIAVDTPAKSAD-- 134 Query: 123 FYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKI 181 + D + GE + L + + +GN L+ G+P + G V+K + I Sbjct: 135 AVVMTDAVQAGEKSCQYLFEQMGGKGNVLLVDGTP-LQTIRDRITGCNNVVKKFP---GI 190 Query: 182 KVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAI 241 KVVG Q + L + + LTA + + + ND +A GA+ A+ +G V + Sbjct: 191 KVVGQQASKN-DRASGLAVTTDMLTATPD-VQGIFGMNDPSALGAVLAVQQAHKAGTVKV 248 Query: 242 SGQDADLAGIKRIAAGT--QTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKD 299 +G D + + T + + A E+A + + + P T Sbjct: 249 TGVDGSPEAVAELKQSGSPFMGTATQNPAEMVRKAVEVAQNIIDNKPPAETTI------- 301 Query: 300 VPSRLLTPIDVNKNNIKDT 318 L+ V ++ + Sbjct: 302 ----LIPSELVTRDTVSQY 316 >UniRef50_B4CUB2 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUB2_9BACT Length = 327 Score = 233 bits (594), Expect = 9e-60, Method: Composition-based stats. Identities = 66/322 (20%), Positives = 115/322 (35%), Gaps = 26/322 (8%) Query: 8 LTLCTSLLLTNVAAHAKEVKIG--------MAIDDLRLERWQKDRDIFVKKAESLGAKVF 59 L LC+ ++L G ++ L + D + + G ++ Sbjct: 23 LLLCSLIVLVGCEKKPAPDTAGAAGSRFFAVSFQTLNNPFFVDLNDGLKQVIDEHGDRLV 82 Query: 60 VQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDA 119 A + Q + + ++I + + + P N + + + A+ I V+ D + DA Sbjct: 83 TLDAQFSSLKQKNDLSDVIEQKPAAIFLNPVNWESVRATLIAARNAKIPVIVVDAPVPDA 142 Query: 120 D-IDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDS 178 D + ++ DN G L A+AL D PQ ++ S + AG VL Sbjct: 143 DLVLAQVASDNVAAGRLAAQALGDARPQAKVAILQYSV-NKACVDRVAGFTDVLAKSF-- 199 Query: 179 GKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGK 238 ++ Q V G +M + L + +DAV ND A G + A+ A G SGK Sbjct: 200 PGATIIARQDVKGTSEAT-RPVMRDLLGRFPD-LDAVFPINDPGAIGCVSAIDAAGRSGK 257 Query: 239 VAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLK 298 V + D + I G T + + + AA A + G+ + Sbjct: 258 VLVVTVDGSREAAQFILNGGIHSTSAQFPKKIGSLAAGAAYDHLAGKPVDKEIK------ 311 Query: 299 DVPSRLLTPIDVNKNNIKDTVI 320 + V K N + V Sbjct: 312 ------VPVTLVTKANAAEFVK 327 >UniRef50_A8RPX4 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RPX4_9CLOT Length = 362 Score = 233 bits (594), Expect = 9e-60, Method: Composition-based stats. Identities = 57/320 (17%), Positives = 123/320 (38%), Gaps = 30/320 (9%) Query: 18 NVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANG--NEETQMSQIE 75 + + + IG L E + +AE+ G K+ VQ+ + + + Q+ IE Sbjct: 64 AASGNYGDKTIGFVGMTLNNEYHITLANGAKVEAEAKGVKIEVQAGDQHASADAQLGIIE 123 Query: 76 NMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDF------YISFDN 129 NMI VD ++++P + L + + + K+ GI ++ D + D + + +N Sbjct: 124 NMIANKVDGILLVPSSSDGLESALTKCKEAGIPIINLDTKLTDESLANVGLDIPFYGTNN 183 Query: 130 EKVGELQAKALVDIVPQG-NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQW 188 + +L + + +G ++ G NA G ++ + VV +Q Sbjct: 184 YEGAKLAGEYVAKNFEKGTKTAILKGIEGQTNAADRYNGFIEG-----AGDTVTVVAEQT 238 Query: 189 VDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADL 248 W + +N ++AN + ++ ND GA++A+ + ++ I G DA Sbjct: 239 A-NWEVDQGYTAAQNIISANPD-VELFFCCNDNMGIGALRAIKEANMQEQIQIIGFDAVS 296 Query: 249 AGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPI 308 + + G TV + + + +++ +G E ++ Sbjct: 297 EALNLVENGEFLATVAQYPAEMGKLGVDNMLKIFDGGEAESYIDTGT------------E 344 Query: 309 DVNKNNIKDTVIKDGFHKES 328 + K+N+ + KD Sbjct: 345 VITKDNVGEF--KDYLKTFE 362 >UniRef50_C7Q046 Solute-binding protein n=4 Tax=Actinomycetales RepID=C7Q046_CATAD Length = 361 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 109/325 (33%), Positives = 168/325 (51%), Gaps = 20/325 (6%) Query: 18 NVAAHAKEVKIGMAIDDLRLERWQKDRD---IFVKKAESLGAKVFVQSANGNEETQMSQI 74 V+IG+ + + + R++ +A G +V +A + Q +Q+ Sbjct: 41 TATGSNSSVRIGILLPESKTTRYEAFDKPLLEAELQARMPGVQVDYYNAGQDATVQQTQV 100 Query: 75 ENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGE 134 + + +G VL++ + + + V++A G+KV+AYDR+ +D Y+SFDN KVGE Sbjct: 101 DTALTKGDKVLILDAVDSKSIQASVQKAHDAGVKVVAYDRLAQGP-VDAYVSFDNVKVGE 159 Query: 135 LQAKALVDIVPQG----NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVD 190 LQ AL+ + ++ GSP D NA F+ G VL +GK+K+ + Sbjct: 160 LQGTALLAALGSNAATQQIVMINGSPTDPNAAQFKQGAHSVL-----NGKVKIGKEYDTP 214 Query: 191 GWLPENALKIMENALTANN-NKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLA 249 W P A + M A+TA I V ++ND A G ALSA L V ++GQDA L Sbjct: 215 NWDPNTANQEMAGAITALGAPNIHGVYSANDGMAAGIATALSAANL--HVPLTGQDAQLD 272 Query: 250 GIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEP----KADTTLNNGLKDVPSRLL 305 ++RI AGTQTMT+YKP A AA++AVE G+ P D + VPS+L+ Sbjct: 273 ALQRIQAGTQTMTIYKPYKPEATAAADVAVEFAQGRTPGNDLLPDKQTSGSGNVVPSKLI 332 Query: 306 TPIDVNKNNIKDTVIKDGFHKESEL 330 TPI V+K N+ TV+KDG + +++ Sbjct: 333 TPIVVDKTNMCTTVVKDGLYTAAQI 357 >UniRef50_B0PA90 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PA90_9FIRM Length = 338 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 64/314 (20%), Positives = 126/314 (40%), Gaps = 21/314 (6%) Query: 17 TNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSA--NGNEETQMSQI 74 + A ++ G+ + + W +D + +++G ++ N + + Q+S + Sbjct: 42 SAADAPDDKLTFGLVVMSTNSDYWLTLKDGAQEAVDAIGGELVFTGPADNNDIQGQVSLM 101 Query: 75 ENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGE 134 EN+IN VD +++ P + L+ V++A GI V+ D +N +I+ DN G Sbjct: 102 ENLINSKVDAILLTPLDSDALAAPVEKAMDAGIPVIVIDSAVNTDKYTSFIATDNVAGGR 161 Query: 135 LQAKALVDIVPQ-GNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWL 193 + + L++ + G ++ + G + I V+ Q Sbjct: 162 MAMERLIESIGGSGEVVVVNALAGIPSNDARGQGAEEYAAT---VDGITVLPQQHCL--D 216 Query: 194 PENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKR 253 A+ EN + N N + + A+ + A GA QA+ ++G +G++ + DAD IK Sbjct: 217 QAEAMTATENVIIGNPN-LKGIFATFNRGALGAAQAIVSKGKAGEIKMVAFDADADEIKL 275 Query: 254 IAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKN 313 + GT V + + E AV+ NG+E + K+ Sbjct: 276 LEDGTIDALVVQQPYEMGKIGIEYAVKALNGEEVPKTVAPE------------VVIATKD 323 Query: 314 NIKDTVIKDGFHKE 327 N+ D I + + Sbjct: 324 NMNDEAIHKVLYPK 337 >UniRef50_D2S5J9 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S5J9_9ACTO Length = 335 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 70/338 (20%), Positives = 127/338 (37%), Gaps = 36/338 (10%) Query: 5 NILLTLCTSLLLTNVAAHAK------------------EVKIGMAIDDLRLERWQKDRDI 46 L+ L L A+ A+ +KIG ++ DL+ WQ Sbjct: 1 MFSLSAACVLALAGCASGAEQAGDVAADGGETTFEAKDPLKIGYSVYDLQNPYWQSYAAG 60 Query: 47 FVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEG 106 AE G +V + +++ Q+S ++IN+G+ L+I P L + + A E Sbjct: 61 VRAGAEEAGIEVVIADQKSSQQEQVSGSLDLINQGISALIITPVQPSALPSTIDAAHGEK 120 Query: 107 IKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVPQ----GNYFLMGGSPVDNNAK 162 I V+ D D D YI +N + G L A+ +V+ + ++ + Sbjct: 121 IPVVVADIGTEG-DYDGYILSNNYEGGRLAAEHVVEKLGGTPGPHQVGVIELHAGSVVGE 179 Query: 163 LFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDAT 222 +G + L ++V + ++ L+AN ++D + A+ND + Sbjct: 180 ERVSGFVDRLGE---EENFEIVSSLD-GNDTVDGGFTAAQDMLSANP-ELDVIYAANDDS 234 Query: 223 AGGAIQALSAQGLS--GKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVE 280 A GA +A+ G+S + G D + I G + TV + A E A+ Sbjct: 235 AVGASRAMETAGVSVANGFTLIGFDGSDPALDLIEQGVMSGTVAQDPFGQGQKAVETALA 294 Query: 281 LGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDT 318 L NG++P + + V N+ + Sbjct: 295 LLNGEDP------GYSDEATKTIYFPVEMVTAENVAEF 326 >UniRef50_C6B4I0 Periplasmic binding protein/LacI transcriptional regulator n=23 Tax=Bacteria RepID=C6B4I0_RHILS Length = 313 Score = 231 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 73/290 (25%), Positives = 113/290 (38%), Gaps = 18/290 (6%) Query: 28 IGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVI 87 I + ++ + KA+ LG + + + + + Q I+ I RG +++ Sbjct: 30 IAIITPAHDNPFFKAEAVGAEAKAKELGYETLLMTHDDDANKQSEMIDTAIGRGAKAIIL 89 Query: 88 IPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADID-FYISFDNEKVGELQAKALVDIVP- 145 VK+AK GI DR IN + I +N + +L A+ V ++ Sbjct: 90 DNAGADASVAAVKKAKDAGIPSFLIDREINATGVAVAQIVSNNYQGAQLGAQEFVKLMGE 149 Query: 146 QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENAL 205 +GNY + G D NA + G V+ Y D +K V Q W A ME L Sbjct: 150 KGNYVELVGKESDTNAGIRSQGYHDVIDDYPD---LKSVAKQSA-NWSQTEAYSKMETIL 205 Query: 206 TANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYK 265 AN + I V++ ND A GAI AL A G V + G D I +G TV + Sbjct: 206 QANPD-IKGVISGNDTMAMGAIAALQAAGRKD-VIVVGFDGSNDVRDSIKSGGIKATVLQ 263 Query: 266 PITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNI 315 P A A E A + + +L+ + +N +N Sbjct: 264 PAYAQAQLAVEQADAYIKNKTTPKEEK----------QLMDCVLINADNA 303 >UniRef50_C2KYA7 Possible periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Oribacterium sinus F0268 RepID=C2KYA7_9FIRM Length = 281 Score = 231 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 81/299 (27%), Positives = 132/299 (44%), Gaps = 23/299 (7%) Query: 28 IGMAIDDLRLERWQKDRDIFVKKAESLGAK---VFVQSANGNEETQMSQIENMINRGVDV 84 + + + + E + K+AE LG + + TQ+SQIE + GVD Sbjct: 1 MALFMSHMTNEFVKTLSSSVQKEAEELGYTGDSFKIYDGKNDVATQVSQIEQAVTLGVDG 60 Query: 85 LVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADI-DFYISFDNEKVGELQAKALVDI 143 ++I P + + VK+A++ G+KV+ ++ I+D + D ++ DNE G K +++ Sbjct: 61 IIIEPVSTDGIVKAVKDAEKVGVKVVILNQRISDQNAADTFVGADNESTGAALMKKVMED 120 Query: 144 V-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIME 202 + +GN + G + G VL Y D +KV+ D W AL + E Sbjct: 121 LDGKGNIVELLGPMGSDGQVGRSKGFDSVLAEYPD---VKVIASDSAD-WDTAKALTLTE 176 Query: 203 NALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMT 262 N LT++ I AVVA ND A GA QA+ GL+ K+ + G DA G+ I G T T Sbjct: 177 NWLTSS--DIQAVVAQNDGMAVGAAQAIKEAGLTDKIKVYGVDATSDGLNAIVNGGMTGT 234 Query: 263 VYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTVIK 321 V + +A++ L GQ + N + K N+ + + K Sbjct: 235 VSQGTENQGKISADLCSNLIYGQSVPKEVIATNVVY------------TKENVNEILKK 281 >UniRef50_D1AQM7 Periplasmic binding protein/LacI transcriptional regulator n=9 Tax=Bacteria RepID=D1AQM7_SEBTE Length = 326 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 77/340 (22%), Positives = 137/340 (40%), Gaps = 40/340 (11%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAK--------------EVKIGMAIDDLRLERWQKDRDI 46 MK L T+ ++ K + KIG+ I + + R+ Sbjct: 1 MKKIIFLFTILLLIMSCGNKQETKAEGAAGNTAETKEAKKKIGVLIPGP-VGYFVAVREG 59 Query: 47 FVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEG 106 K A ++ A + Q+SQ+E++I++ VD++ I + V+ A + Sbjct: 60 IDKAAAENNVEITYSDAGWDASKQLSQVEDLISKKVDLIAIAAVDSNAAKTAVRMANEAN 119 Query: 107 IKVLAYDRMIND------ADIDFYISFDNEKVGELQAKALVDIVPQ--GNYFLMGGSPVD 158 I +LA+ I D + Y+ + + G+L + ++ + G L+ G P Sbjct: 120 IPILAFTNAIGDKENGEYEGLITYVGQNEVETGKLTGELAKSLLGEKGGKVVLIEGRPGT 179 Query: 159 NNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVAS 218 + R G M+ L + +VV Q W E ALKI+E+ + N ID ++A Sbjct: 180 SPQINRRKGVMEALDT---NKNFEVVYTQTS-NWEKEQALKIVEDLIQKN-QTIDVIIAQ 234 Query: 219 NDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIA 278 +D +A GA AL L K+ + G G+ + +G T Y TA A Sbjct: 235 DDNSAIGAGMALKEANLKDKILVIGLGGSTEGLNAVKSGLIDGTTYMSAVEEGYTAITAA 294 Query: 279 VELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDT 318 V+ NG++ + P + ++VNK+N++ Sbjct: 295 VKYLNGEKVE------------PVTQMKQVEVNKSNVESF 322 >UniRef50_Q01TB6 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01TB6_SOLUE Length = 323 Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats. Identities = 75/334 (22%), Positives = 122/334 (36%), Gaps = 30/334 (8%) Query: 1 MKIKNILLT-LCTSLLLTNVAAHAKE--VKIGMAIDDLRLERWQKDRDIFVK-KAESLGA 56 MK + + T L +++LL K+ + + + + K A Sbjct: 1 MKRRLWMTTGLASAVLLAGCGGEVKKKQFVVAFSQANNAEPYRAAQNALMEKLFAAQPDV 60 Query: 57 KVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI 116 K+ + A + Q++Q+E I + D+L++ P L+ V+ +A + I V+ +R I Sbjct: 61 KLVISDAQQDNSKQVAQVETFIRQKPDLLIVAPNERAALTAVMGQAMEAKIPVICLERDI 120 Query: 117 NDADIDFYISFDNEKVGELQAKALVDIVPQ------GNYFLMGGSPVDNNAKLFRAGQMK 170 + YI DN +G L + +V + + GN M G G + Sbjct: 121 LQPNYTSYIHSDNVAIGRLAGQFIVGHLTKKYGKPAGNVVAMRGLLGVEGEINRDRGAKE 180 Query: 171 VLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQAL 230 +L Y + IK+V D V W+ A M L A KID V ND A GA Sbjct: 181 ILDKYPE---IKIVAD-PVADWIQAKAKDRMTEVLRAQP-KIDVVYGHNDPMAIGAYLGA 235 Query: 231 SAQGLSGKVAISGQD---ADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEP 287 G ++ G D GIK++ G T P+ + + A EI + Sbjct: 236 KELGREKEMIFVGVDGLGGPAGGIKKVMDGVLAATFVYPLWV--DKAVEIGTRILR---- 289 Query: 288 KADTTLNNGLKDVPSRLLTPIDVNKNNIKDTVIK 321 G +L + V N K Sbjct: 290 ------EPGFVPAKDYVLESVMVTTENAPQMYEK 317 >UniRef50_C6VSM5 Sensor protein n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VSM5_DYAFD Length = 904 Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats. Identities = 59/301 (19%), Positives = 118/301 (39%), Gaps = 13/301 (4%) Query: 18 NVAAHAKE-VKIGMAIDDLRLERWQKDRDIFVKK-AESLGAKVFVQSANGNEETQMSQIE 75 A ++ IG + E + D ++ A K+ + A+ N Q+ QIE Sbjct: 16 GCAGKQEDAYVIGFSQCTGDDEWRRAMLDGMQRELAFHNNTKLIFRDAHANSAVQVKQIE 75 Query: 76 NMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGEL 135 ++ G+ +L++ P L+ V+++A ++G+ V+ DR + Y+ DN +VG+ Sbjct: 76 ELLRNGIHLLIVSPNESDPLTPVIEKAYKQGVPVVVVDRRTSSPYYTAYVGGDNYQVGKT 135 Query: 136 QAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLP 194 + ++ G + G P + A G + L ++ + Q W Sbjct: 136 VGEYAAALLGGNGKMIEITGLPRSSPASDRHRGLVDALATRPSIRRVATLNGQ----WQK 191 Query: 195 ENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAG---I 251 + A + L + +D + A N+ A GA + + K+ + G D I Sbjct: 192 DIAKSELRKVLPRFPD-LDLIFAQNEVMAMGAREVCNDIFPDRKIRVIGVDGLPGQFGDI 250 Query: 252 KRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVN 311 + + G T T P AA +A+ + Q + + L + D + + + + Sbjct: 251 QMVYDGHITATALYPTG--GEEAARVAMNILQKQPYQKENLLQTAIIDSSNVRMIKMQTD 308 Query: 312 K 312 K Sbjct: 309 K 309 >UniRef50_A5KKL8 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KKL8_9FIRM Length = 325 Score = 231 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 76/341 (22%), Positives = 143/341 (41%), Gaps = 38/341 (11%) Query: 1 MKIKNILLTLCTSLLLTNVAA-------------------HAKEVKIGMAIDDLRLERWQ 41 MK K + + +C S+ + A + K+ M + + + E Sbjct: 2 MKKKMLAVAVCVSMCMMAFAGCTSESGGGSDKKAEQTEGKKEESGKVFMTVSNQQNEFMV 61 Query: 42 KDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKE 101 + F + E+ G +V + A+ + Q+SQIE I+ + +++ P + L+ +KE Sbjct: 62 GMAENFKEVGEAAGYEVQLMDADLDATKQVSQIETAISENAEAILVEPCSVDGLTTGLKE 121 Query: 102 AKQEGIKVLAYDRMINDAD-IDFYISFDNEKVGELQAKALVDIVP-QGNYFLMGGSPVDN 159 A GI V ++ D + I D + GEL+ + ++ +M G+ + Sbjct: 122 AHDAGIPVFVIHNNVSATDLVTSLIHVDVRQGGELKMEQVIKDCGEDAKIAIMTGTLGQD 181 Query: 160 NAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASN 219 G VL+ Y + ++VV + W +A + EN L A+ +IDA+V +N Sbjct: 182 TTNQICGGYDAVLEKYPN---VEVVFEG-AGNWGATDAAPLAENWL-ASGKEIDAIVCNN 236 Query: 220 DATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAV 279 D A G + L + G S ++ + G DA G+K + +G T+Y A E+ Sbjct: 237 DGMALGVVSVLKSAGKSEQIKVYGLDATNEGLKAVDSGEMAATIYVDSKAEIEKAFEMLE 296 Query: 280 ELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTVI 320 +L G++ A+ + + V K N+K+ + Sbjct: 297 DLKAGKKVDAEYK------------VPSVLVTKENVKEYMK 325 >UniRef50_A8RKK5 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RKK5_9CLOT Length = 350 Score = 231 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 60/304 (19%), Positives = 125/304 (41%), Gaps = 21/304 (6%) Query: 19 VAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKV--FVQSANGNEETQMSQIEN 76 + ++ + I+ + K E K+ + + TQ+SQ+EN Sbjct: 60 GGTSGEPAEVSVIIETFDNTFASFVMNAMKKYEEEHKDKIHITYLDSKQDANTQISQVEN 119 Query: 77 MINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQ 136 I G ++ + + + +V+ K+ G+ ++A++R+ + D ++ D G L Sbjct: 120 QILNGTQAIICLAVDAKQSEPIVRACKEAGVPLIAFNRIFENCD--SFVGADGAVAGSLL 177 Query: 137 AKALVDI-VPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPE 195 A+ + +GN ++ G N + R ++ L ++ + + W + Sbjct: 178 ARFTGEKTGGKGNVAIVNGIMGQENQFIRRDAIVETLGEMYPDMQVVI---EGAGDWKRD 234 Query: 196 NALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIA 255 AL+++E L + IDA++ ND A G A+ G S + + G + D GI + Sbjct: 235 KALQLVETWLQS-GTDIDAILCLNDDMAMGTQLAVEQAGKSDDIIVCGVNGDPDGINAVR 293 Query: 256 AGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNI 315 G TV++ A A E A++ +G++P++ ++ V +N+ Sbjct: 294 DGKIAATVFQNPDRQAEEALEAALQYIHGEKPESKI------------MIPFELVTADNV 341 Query: 316 KDTV 319 D V Sbjct: 342 DDYV 345 >UniRef50_A6UE72 Monosaccharide-transporting ATPase n=13 Tax=Alphaproteobacteria RepID=A6UE72_SINMW Length = 310 Score = 231 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 69/297 (23%), Positives = 137/297 (46%), Gaps = 7/297 (2%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFV 60 MK+ +L+ T+ +L A+ A+ KIG+A+ +L+ + + + + K A G +V V Sbjct: 1 MKLSTLLVAATTASVLALPASAAEVKKIGLAVPNLQADFFNQIKLGVEKHAREKGLEVVV 60 Query: 61 QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD 120 A + TQ+SQ+++++ + +D + IP + + A++ GI V+ DR+ A Sbjct: 61 VDAKNDTNTQVSQVQDLMIQDIDAFIYIPAGAAAAAVPTRLAREAGIPVINVDRVPEGAP 120 Query: 121 IDFYISFDNEKVGELQAKALVDI-VPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSG 179 D +I+ ++ + K +++ G ++ G G + + + Sbjct: 121 GDTFIAGESVESAYAVCKFIIEKAGGSGKMAIIHGQKGTTPEVDRFTGCKRAIDE---NK 177 Query: 180 KIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKV 239 ++++ QW + W + I +N L AN + I + D A GA +A+ LS KV Sbjct: 178 GVELIDQQWSNMWSADEGFSIAQNMLQANPD-ITIIFGQADGLAMGAAKAVDVANLSDKV 236 Query: 240 AISGQDADLAGIKRIA--AGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLN 294 I G D D++ ++ +A G T + + A E A+ + G++ + T N Sbjct: 237 IIGGYDGDVSALEYLARCKGPFIATATQSTQKMGVLAVESALAVAAGEKVEERQTPN 293 >UniRef50_Q896U1 D-ribose-binding periplasmic protein n=1 Tax=Clostridium tetani RepID=Q896U1_CLOTE Length = 324 Score = 231 bits (589), Expect = 4e-59, Method: Composition-based stats. Identities = 70/338 (20%), Positives = 138/338 (40%), Gaps = 28/338 (8%) Query: 1 MKIKNILLTLCTSLLLTN--------VAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAE 52 M K + L + +L A+ + + I + + E W + K A+ Sbjct: 1 MLKKRLALITMSVMLSAGVLAGCGQKSASDSTKKNIALIVKSTDSEYWLSVKAGAEKAAK 60 Query: 53 SLGAKVFVQSA--NGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVL 110 GA + + + + +++ +E+ IN+ VD +V+ + + L V+ A I ++ Sbjct: 61 EAGANIIFKGPATEQDIQGEVNIVEDAINQKVDGIVLAASDTKALIQPVENAINAKIPLV 120 Query: 111 AYDRMINDADIDFYISFDNEKVGELQAKALVDIVPQ-GNYFLMGGSPVDNNAKLFRAGQM 169 D ++ + +I+ DNEK A +++ + G ++ P + A G Sbjct: 121 TVDSGVDSDKVASFIATDNEKAASQAADVCAELIGKSGKVGVVNFVPGVSTAVQREKGFR 180 Query: 170 KVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQA 229 + + I+++ Q+ A+ I E+ LTAN + + A+ A+N+ +A G QA Sbjct: 181 DGMSKH---SGIELLKTQYSQS-DKSKAMAITEDILTANPD-VKAIFAANNRSALGVAQA 235 Query: 230 LSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKA 289 L +G++GKV + DAD IK I G+ T + + + + + L G+ + Sbjct: 236 LKGKGVAGKVKVVAFDADPDEIKGIEDGSITALIVQNPYKMGEEGVKNVLALMKGETVEK 295 Query: 290 DTTLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKE 327 V K NI D ++ + E Sbjct: 296 RIDTG------------VTIVTKENINDPEVQKVLYPE 321 >UniRef50_C3MI97 Putative solute-binding component of ABC transporter n=1 Tax=Rhizobium sp. NGR234 RepID=C3MI97_RHISN Length = 327 Score = 230 bits (588), Expect = 4e-59, Method: Composition-based stats. Identities = 64/328 (19%), Positives = 137/328 (41%), Gaps = 15/328 (4%) Query: 3 IKNILLTLCTSLLLTNV--AAHAKEVKIGMAIDDLRLERWQKDRDIFVK--KAESLGAKV 58 + + + S +L AA ++++I E + + ++ Sbjct: 4 RRTFIAAIAASTMLLGADLAAAQEKIRIAALSFGEAGEYMKAWSTEIQNHPAVKEGKVEI 63 Query: 59 FVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIND 118 V + Q +QI+ + + + +++ P++ + + + +A + + V+ + Sbjct: 64 TVFDGKYDPLIQANQIDTALTQQFNAIIMAPFDLEASAPAIDKAAEAKVPVIVSALKTSS 123 Query: 119 ADIDFYISFDNEKVGELQAKALVDIVP-QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVD 177 + I D+ + G + A+ + +P GN LM G + RAG L+ + Sbjct: 124 KNYTASIIVDDREGGRIIAEEMAKRLPSGGNLVLMEGPIGQSAQIERRAGVDAGLEAH-- 181 Query: 178 SGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS- 236 +K++ D+ W +MEN L+A ++I+ V+A ND A GAI+A+ A + Sbjct: 182 -SNLKLLADKS-GNWSRAEGQALMENWLSAYPDQINGVLAENDEMALGAIEAMKAANVDL 239 Query: 237 GKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNG 296 KV + D + + G +T+YK A ++A+ G E K + + NG Sbjct: 240 SKVPVIAIDGIPDAKRAVENGEMAVTLYKYARAEGQGAVDLALRQVIGTEYKPQSEVWNG 299 Query: 297 LKD-----VPSRLLTPIDVNKNNIKDTV 319 L + ++ + ++K+N+K + Sbjct: 300 LMEWKDGTQKDYVVPWLILDKDNVKKYM 327 >UniRef50_D1C9K0 ABC-type xylose transport system periplasmic component-like protein n=3 Tax=Bacteria RepID=D1C9K0_SPHTD Length = 434 Score = 230 bits (588), Expect = 4e-59, Method: Composition-based stats. Identities = 123/324 (37%), Positives = 179/324 (55%), Gaps = 11/324 (3%) Query: 18 NVAAHAKEVKIGMAIDDLRLERW-QKDRDIFVKKAESL--GAKVFVQSANGNEETQMSQI 74 + ++ I + + + + R+ DR F + L ++ +AN + TQ Q Sbjct: 96 ATPSDTEDGTIALLLPETKTARYESADRPFFEAYFQELCPNCQIIYNNANQDAATQQQQA 155 Query: 75 ENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI-NDADIDFYISFDNEKVG 133 E + G VLV+ P + + + ++A+ +G+ V+AYDR I N + +YISFDN +VG Sbjct: 156 EAALTNGAQVLVLDPVDSAAAAAIAEQAQAQGVPVIAYDRAILNSEGVSYYISFDNVEVG 215 Query: 134 ELQAKALVDIV---PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVD 190 LQA+ LVD + ++ GSP DNNA F+ G V P VD+G++ + + Sbjct: 216 RLQAQTLVDALEGVDDPQIVMINGSPTDNNAGEFKEGAHSVFDPLVDAGELTIAMEYDTP 275 Query: 191 GWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAG 250 W P+ A M+ ALTA N++D V A+ND TA GAI A+ A G+S ++GQDA+LAG Sbjct: 276 DWSPDQAQNEMQQALTALGNQVDGVYAANDGTASGAIAAMKAAGISPLPPVTGQDAELAG 335 Query: 251 IKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADT----TLNNGLKDVPSRLLT 306 I+RI G Q MTVYK I A AAE+A L GQ+ T NNG DVP+ LLT Sbjct: 336 IQRILIGEQYMTVYKAIQPEAEIAAELAFALLTGQDVPESVTGGQTANNGATDVPAILLT 395 Query: 307 PIDVNKNNIKDTVIKDGFHKESEL 330 P+ V ++NI DTV+ D F E+ Sbjct: 396 PVAVTQDNIADTVVADDFWTVDEI 419 >UniRef50_A9GMT2 Put. D-ribose-binding periplasmic protein n=2 Tax=Bacteria RepID=A9GMT2_SORC5 Length = 340 Score = 230 bits (587), Expect = 7e-59, Method: Composition-based stats. Identities = 61/304 (20%), Positives = 118/304 (38%), Gaps = 16/304 (5%) Query: 25 EVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSA--NGNEETQMSQIENMINRGV 82 ++I + E W+ VK + L V + + + Q+ + + + +GV Sbjct: 40 RLRIAVVPKGTTHEFWKSVHAGAVKASRELDVDVVWKGPLREDDLKAQVDVVSSFVAQGV 99 Query: 83 DVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVD 142 +V+ P + L V+ A+Q I V+ +D + D +++ DNE G L + L Sbjct: 100 SGIVLAPLDATALRAPVRAARQAKIPVVVFDSDLASDDHVSFVATDNEAAGRLAGEHLGK 159 Query: 143 IVP-QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIM 201 + G ++ + + G + ++ + V + G E+A Sbjct: 160 AIGEDGKVVVLRYQEGSASTQHREKGFLDAVRAMP---GVTVASENQYGGATTESAFHKS 216 Query: 202 ENALTAN---NNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGT 258 E+ L A I V N++T G +QAL ++ KV G DA + + G Sbjct: 217 ESLLLAQRAAEGAIAGVFTPNESTTFGMLQALRKTNVARKVKFVGFDASEKLLGALREGD 276 Query: 259 QTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDT 318 V + + A + V +G++ A D SR++T D++ +++ Sbjct: 277 IEALVVQNPFNMGYVAVKTMVAHLHGEKVAAR-------IDTGSRVVTRQDLDDPAVQEI 329 Query: 319 VIKD 322 V D Sbjct: 330 VRPD 333 >UniRef50_P39265 D-allose-binding periplasmic protein n=33 Tax=Bacteria RepID=ALSB_ECOLI Length = 311 Score = 229 bits (586), Expect = 8e-59, Method: Composition-based stats. Identities = 72/322 (22%), Positives = 132/322 (40%), Gaps = 24/322 (7%) Query: 2 KIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQ 61 K L+L+ A A E + + L W + +A++LG V + Sbjct: 3 KYLKYFSGTLVGLMLSTSAFAAAEY--AVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIF 60 Query: 62 SA--NGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIN-- 117 ++ G+ ++Q+ E++ N+ + P + L V A ++GI ++ D I+ Sbjct: 61 ASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMD 120 Query: 118 -----DADIDFYISFDNEKVGELQAKALVDIVP--QGNYFLMGGSPVDNNAKLFRAGQMK 170 +++ +++ DN VG A ++D + G ++ G + + + R G + Sbjct: 121 NLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATE 180 Query: 171 VLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQAL 230 K + +IK+V Q D W AL + N L N N I A+ +ND A G QA+ Sbjct: 181 AFKK---ASQIKLVASQPAD-WDRIKALDVATNVLQRNPN-IKAIYCANDTMAMGVAQAV 235 Query: 231 SAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKAD 290 + G +GKV + G D K + AG T TV + + T ++ V+ + Sbjct: 236 ANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPL 295 Query: 291 TTLNNGLKDVPSRLLTPIDVNK 312 +L+ I V + Sbjct: 296 DKAPE------FKLVDSILVTQ 311 >UniRef50_A1SYD2 Bifunctional carbohydrate binding and transport protein n=12 Tax=Proteobacteria RepID=A1SYD2_PSYIN Length = 312 Score = 229 bits (586), Expect = 8e-59, Method: Composition-based stats. Identities = 71/321 (22%), Positives = 132/321 (41%), Gaps = 22/321 (6%) Query: 4 KNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLR-LERWQKDRDIFVKKAESL-GAKVFVQ 61 K + +T + + + AK+ IG+ +++ + V Sbjct: 3 KKLAITGLAFSICFSTFSFAKDYVIGVTQNNVGVDSYQTTYDIALKDTMTKYPNVEGIVL 62 Query: 62 SANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD- 120 A GN Q++Q++++I + VD +++ P NGQ L+ +V++AKQ GI V+ + I++ Sbjct: 63 DAGGNVARQIAQVQDLIQQEVDAIILWPTNGQALTPIVRKAKQMGIPVIITNSNISEKGQ 122 Query: 121 --IDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVD 177 I + + G+ A+ + + + +G + G P A + G L D Sbjct: 123 EFITAFSGPNTITQGQYAAELMCEGLNGKGQVVQITGQPGYQTAINRQKGFEDSLAA--D 180 Query: 178 SGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSG 237 + ++ Q D W E + ++MEN +T KID V A++D GA+ A+ L Sbjct: 181 CPGVSIIDSQPGD-WNREKSQRVMENFITRFGTKIDGVYAADDNMGIGALNAIKEADLKN 239 Query: 238 KVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGL 297 + I G G I G+ +V + A A I +++ NG + + D + Sbjct: 240 -IKIVGATNFAVGYDAIKEGSYYGSVVQSPVSDAIAALAITMKILNGDKVEKDNYFDTPK 298 Query: 298 KDVPSRLLTPIDVNKNNIKDT 318 V NI + Sbjct: 299 ------------VTLANIDEF 307 >UniRef50_C7MZ66 Monosaccharide-binding protein n=1 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MZ66_SACVD Length = 376 Score = 229 bits (586), Expect = 8e-59, Method: Composition-based stats. Identities = 107/325 (32%), Positives = 171/325 (52%), Gaps = 12/325 (3%) Query: 17 TNVAAHAKEVKIGMAID-DLRLERWQK-DRDIFVKKAESLGAKVFVQSANGNEETQMSQI 74 A A K+G+ + RW+ D+ + + + G + +Q+A G+ + + Sbjct: 38 GGAQADAPLGKVGVILPETASSARWEGFDKPMLEEALRAKGFEPDIQNAQGDVQKFSTLA 97 Query: 75 ENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGE 134 + MI +GV VL+I N ++ V +AK GI + YDR+ ++Y+SFDN +VGE Sbjct: 98 DGMIAQGVQVLIIASINSEIGGAVAAKAKSAGIPTIDYDRLNLGGSSEYYVSFDNVRVGE 157 Query: 135 LQAKALVDIVPQ---GNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDG 191 LQ + L + + + G+P D+NA LF GQ VL+P DSG++++V Q +D Sbjct: 158 LQGEGLAEALDGKSGAQVIEIEGAPTDHNATLFHEGQRNVLQPLYDSGELELVRSQPIDD 217 Query: 192 WLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGI 251 W + ++ E LT+N ++D VVA+ND A I L GL+GKV ++GQDA G+ Sbjct: 218 WNNQEGGRVFEQILTSNGGEVDGVVAANDGLASAVITVLKKYGLNGKVPVTGQDATAEGL 277 Query: 252 KRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKD------VPSRLL 305 + I G Q MTV+KPI A AE+A L G + A+ + L+D V S LL Sbjct: 278 RAILRGDQYMTVFKPIKEEAEATAELAAALVEGDKAAAEAVATDTLEDPKGKREVASVLL 337 Query: 306 TPIDVNKNNIKDTVIKDGFHKESEL 330 P + ++ +K V+ +G+ E+ Sbjct: 338 EPYLITRDEVKR-VVDEGYVSADEI 361 >UniRef50_C0EY05 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EY05_9FIRM Length = 329 Score = 229 bits (586), Expect = 9e-59, Method: Composition-based stats. Identities = 63/317 (19%), Positives = 126/317 (39%), Gaps = 20/317 (6%) Query: 5 NILLTLCTSLLLTNVAAHAKE--VKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQS 62 I + L + +++ IG + ++ + ES G + + Sbjct: 24 TICIVSIALLFFSRNKNESEKSKRTIGALYMTMNNPYFEVINEEIKAVVESKGDVLETRD 83 Query: 63 ANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD-I 121 + + + Q Q+E I VD ++I + + + + +++AK+ GI V+A D +I + + Sbjct: 84 SGMDAKVQAKQVEKFIEEKVDCILINAVDWKKIGSSLEKAKKAGIPVIAVDALIYNRSFV 143 Query: 122 DFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKI 181 D + +N + GE AK L+ +G + + +A G + L+ K Sbjct: 144 DGTVVSNNYQAGEQCAKDLMKRRKKGKILFLV-QSENKSAIDRIKGFKETLEKA--GWKY 200 Query: 182 KVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAI 241 + VG+ G E + ++E L + ID V+A ND +A GA+ AL A+ + V + Sbjct: 201 ENVGELECQG-QLELSQPLVEKVLNKTKD-IDVVMALNDPSAMGAMAALDAEHMLSDVLV 258 Query: 242 SGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVP 301 G D I T + E+ ++ +G++ + Sbjct: 259 YGADGSPEAKTMIYENKMAATSAQSPRTTGKKTVEMLYKILDGKKTEKQC---------- 308 Query: 302 SRLLTPIDVNKNNIKDT 318 ++ + K+NI D Sbjct: 309 --IVPVSLITKDNINDY 323 >UniRef50_UPI00016C56B8 bifunctional carbohydrate binding and transport protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C56B8 Length = 349 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 60/324 (18%), Positives = 119/324 (36%), Gaps = 18/324 (5%) Query: 2 KIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAK---- 57 ++ LL + + A +E I + L E WQ R + A L A+ Sbjct: 3 RVHLYLLLAAVLPIASGCARRGEEYTIVVIPKGLSHEHWQSVRRGAERCAADLEAEDGTR 62 Query: 58 --VFVQSA--NGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYD 113 V + Q+ ++ + G LV+ P + ++ VK A G+ V+ D Sbjct: 63 VRVIFDGPLRERDALEQIRIVDRRVATGASALVLAPQHSATMTACVKRAADAGVPVVIID 122 Query: 114 RMINDAD-IDFYISFDNEKVGELQAKALVDIV-----PQGNYFLMGGSPVDNNAKLFRAG 167 ++D + Y++ DN G L + L+ + + L + + G Sbjct: 123 SGLDDPNHFVKYVATDNYNGGRLAGRHLIRELQRRRKDKPKLILFRYAVGSQATEDRERG 182 Query: 168 QMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAI 227 +K + + G ++A++ + N++D + A N+++A G Sbjct: 183 FEDEVKE--RCPGAEWLSTDKYAGATRDSAMREAGPLILQFGNQVDGIFAPNESSASGTA 240 Query: 228 QALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEP 287 L AQGL+ KVA+ D ++ I G ++ + + +A V G++ Sbjct: 241 DVLRAQGLNQKVALMAFDGSKPLLQSIQQGDVIGSILQDPYRMGYLSAWYCVRHLRGEDM 300 Query: 288 KADTTLNNGLKDVPSRLLTPIDVN 311 + + L+T +V Sbjct: 301 --NNGRREMSEGTGEYLITAENVT 322 >UniRef50_D2PNL9 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Actinomycetales RepID=D2PNL9_9ACTO Length = 335 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 78/307 (25%), Positives = 116/307 (37%), Gaps = 24/307 (7%) Query: 19 VAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAES-LGAKVFVQSANGNEETQMSQIENM 77 + IGM+ ++ Q+ D A +V A + Q++ +EN Sbjct: 40 CKGADGKYVIGMSQANVAEPYRQRMDDDIKAAAAEVPQFEVKFADAAQDNAKQVADVENY 99 Query: 78 INRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQA 137 I + +D+L+I P + L+ VVK+A +GI VL DR + +I DN ++G Sbjct: 100 ITQQIDLLIISPNEAKPLTAVVKKAYDQGIPVLVLDRKVEGDAYTGFIGGDNVQIGTEAG 159 Query: 138 KALVDIV--PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPE 195 K + + V GN + G G +K + K+KVV WL E Sbjct: 160 KYVAEKVLPNGGNVVEIKGLAGATPQAERNQGFATGIKA---NPKVKVVAT-ASGDWLRE 215 Query: 196 NALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADL---AGIK 252 M+ L AN KID V A ND A GA A A G ++ G DA GIK Sbjct: 216 KGQAQMDALLKANP-KIDVVYAHNDPMAEGAYLAAKAVGREKEMKFIGIDALPIPSGGIK 274 Query: 253 RIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNK 312 + G T T P A A +L + ++ L ++K Sbjct: 275 AVEQGRLTATFTYPTN--GKEAIAAAKKLL-----------VDCGTIEKTQTLPTRLIDK 321 Query: 313 NNIKDTV 319 N Sbjct: 322 TNAAQIY 328 >UniRef50_A9B1C5 Solute-binding protein n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B1C5_HERA2 Length = 358 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 120/343 (34%), Positives = 178/343 (51%), Gaps = 14/343 (4%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKD-RDIFVKKAESL--GAK 57 M+ + +LL L L+ A K I + + + +R++ R F ++ L + Sbjct: 1 MRRRFVLLVLLLVLVGCGGAEAPKAKIIALLLPEQTTKRYETVDRPWFEREMNLLCNDCQ 60 Query: 58 VFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI- 116 V +A N Q Q E I G VLV+ P + + A ++ I V+AYDR+I Sbjct: 61 VLYYNAQNNPSLQQQQAEEAIKAGARVLVLDPVDSVDARTIADHAAEQSIPVVAYDRLIL 120 Query: 117 NDADIDFYISFDNEKVGELQAKAL-----VDIVPQGNYFLMGGSPVDNNAKLFRAGQMKV 171 N + YISFDN+K+GELQA++L + L+ GS DNNA ++ G KV Sbjct: 121 NSPGVTAYISFDNQKIGELQAESLIAGLAARGLSNPKILLLHGSLSDNNASEYKRGAKKV 180 Query: 172 LKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALS 231 P V +GK+ ++G+ W P A + +E L A ++ID + A+ND TAGGA+ A+ Sbjct: 181 FDPLVAAGKLTIIGEFDTPDWKPAEAQQYVERMLAA-GDQIDGIYAANDGTAGGALVAVQ 239 Query: 232 AQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADT 291 A L I+GQDA+L ++RI G Q MTVYK I A AA+IA L GQ + Sbjct: 240 AAKLEPLPLITGQDAELTAVQRIITGEQHMTVYKAIRPQAEAAAKIAHALMVGQPIPTNL 299 Query: 292 ----TLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 T+ NG+ +VP+ LL P+ V K +KDT++ D F +L Sbjct: 300 VNNRTVANGIMNVPAILLNPVVVTKATVKDTIVSDNFWSPQQL 342 >UniRef50_C6PMK5 ABC transporter (Substrate-binding protein) n=6 Tax=Firmicutes RepID=C6PMK5_9CLOT Length = 366 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 120/363 (33%), Positives = 186/363 (51%), Gaps = 34/363 (9%) Query: 2 KIKNILLTLCTSLLLTNVAAHAKEVK-----------IGMAIDDLRLERWQKDRDIFVKK 50 K+ + +L +L L+ + IG+A+ L+RW +D + K+ Sbjct: 3 KLLSTMLVGVLALSLSACGSKPAATTSSADDGGKTSLIGVAMPTQSLQRWNQDGENMKKQ 62 Query: 51 AESLGAKVFVQSANGNEETQMSQIENMINRG-VDVLVIIPYNGQVLSNVVKEAKQEGIKV 109 E+ KV +Q AN + Q+ IENMIN+ V L++ P +L ++K+A GIKV Sbjct: 63 LEAKKYKVDLQYANNDVNAQVQSIENMINKKIVKFLLLHPLMVLLLQMLLKKASDNGIKV 122 Query: 110 LAYDRMI-NDADIDFYISFDNEKVGELQAKALVDIV----PQG--NYFLMGGSPVDNNAK 162 +AYDR+I ++D+Y +FDN KVG +Q + + + +G N L GGSP DNNA Sbjct: 123 IAYDRLIMKSPNVDYYATFDNFKVGAIQGQYIEKKLGLKDGKGPFNIELFGGSPDDNNAT 182 Query: 163 LFRAGQMKVLKPYVDSGKIKVVGDQ------WVDGWLPENALKIMENALT---ANNNKID 213 F G M VL+PY+D+GK+ V Q + GW A M+N +T A K+D Sbjct: 183 FFYKGAMSVLQPYIDNGKLVVGSKQKDFTTIAIQGWDSAKAQARMDNLITSTYAKGTKLD 242 Query: 214 AVVASNDATAGGAIQALSAQGL----SGKVAISGQDADLAGIKRIAAGTQTMTVYKPITL 269 +++ ND+ A G + AL G ++GQD D + + Q+M+++K Sbjct: 243 VILSPNDSLAIGIVAALKNAGYGTAAKPYPVLTGQDCDKPNVLAMIHDQQSMSIFKDTRT 302 Query: 270 LANTAAEIAVELGNGQ--EPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKE 327 LAN E+ + G+ E T NNG K VPS L PI +K+N K +++ G++KE Sbjct: 303 LANKVVEMVDAIVQGKQAEVNDTKTYNNGSKVVPSFLCDPIYADKDNYKKILVESGYYKE 362 Query: 328 SEL 330 S+L Sbjct: 363 SDL 365 >UniRef50_B7CDT0 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CDT0_9FIRM Length = 326 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 63/298 (21%), Positives = 116/298 (38%), Gaps = 18/298 (6%) Query: 22 HAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRG 81 + KIG + + + + G ++ + + + Q QI +I + Sbjct: 40 STEPRKIGATYMTYNNTFYSVINEEISRILKEHGDQLIALDSAMSLKKQKEQIHYLIEQQ 99 Query: 82 VDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIN-DADIDFYISFDNEKVGELQAKAL 140 VD +VI P + + L + +KEA + I V+ D + + +I + I DN G AK + Sbjct: 100 VDAIVIAPVDYEGLEDSLKEAYRNRIPVIVVDTEVKHNKNITYSIVSDNYDAGVQCAKDM 159 Query: 141 VDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKI 200 + + N L+ S + L G ++ + KVV DG E A+ Sbjct: 160 MRKLDHANIVLLQHS-TTRSGYLRIKGFEDTIQS---NENYKVVKRMECDG-QLEVAMPK 214 Query: 201 MENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQT 260 ME+ + + D V+ ND +A GA+ ALS+ + + G D + + G Sbjct: 215 MESFIEE-GIEFDVVMCLNDPSAMGAMAALSSNNILKDKYVYGIDGTPEAKEMVVEGKMA 273 Query: 261 MTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDT 318 TV + A E+ +L + + K ++ + K N++D Sbjct: 274 ATVAQSPKTFGKKAGEVIYKLFSQETIKNKNEMS-----------PVQIITKENVQDY 320 >UniRef50_A9AWB1 Periplasmic binding protein/LacI transcriptional regulator n=5 Tax=Bacteria RepID=A9AWB1_HERA2 Length = 333 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 70/314 (22%), Positives = 114/314 (36%), Gaps = 26/314 (8%) Query: 6 ILLTLCTSLLLTNVAAHA----------------KEVKIGMAIDDLRLERWQKDRDIFVK 49 I L + +L ++ E+ +G A E + Sbjct: 11 IALAIAWTLAACGGSSSGVGAVAPSSLDLKTKTYPELVVGFAQIGAESEWRTANTRSIQD 70 Query: 50 KAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKV 109 A LG ++ + A +E Q+ I + I +GVDV+ + P V E KQ GI + Sbjct: 71 TANQLGVELALSDAQQQQENQIKAIRSFIAQGVDVIGVSPVVETGWDEVFAEVKQAGIPL 130 Query: 110 LAYDRMINDAD--IDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRA 166 + DR N D I D + G + ++ QG ++ G+ Sbjct: 131 ILLDRNANVPDDLYSVRIGSDFVEEGRRACGEMARLLDGQGAIVVLEGTQGSAPMIGRGT 190 Query: 167 GQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGA 226 G + L+ Y + ++ Q D ++ + M L + N ID V A ND A GA Sbjct: 191 GFQECLQSYPA---LHIIDSQSGD-FIRARGKEEMAALLQKHGNSIDGVFAQNDDMALGA 246 Query: 227 IQALSAQGLSG--KVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNG 284 I+A+ GL + I DA A + + G T+ LL A+ L NG Sbjct: 247 IEAIEEYGLRPGVDIKIVSIDAVRAAFEAMIDGKLNATIECNP-LLGPLFFATALNLANG 305 Query: 285 QEPKADTTLNNGLK 298 + + G+ Sbjct: 306 IPVEKWIKPDEGIY 319 >UniRef50_A6LC26 Sensor protein n=6 Tax=Bacteroidales RepID=A6LC26_PARD8 Length = 911 Score = 228 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 66/309 (21%), Positives = 122/309 (39%), Gaps = 19/309 (6%) Query: 1 MK---IKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFV-KKAESLGA 56 MK + +L + K+ IG++ + Q + Sbjct: 1 MKGNPLYILLWLFLILCFACSPGKKEKKYVIGVSQCSMTDIWRQSMIRDMEVEALNHPEI 60 Query: 57 KVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI 116 ++ V A+ + +TQ+SQI+ I + VD+L+I + ++ V EA + GI + DR I Sbjct: 61 ELVVMDASQDNDTQISQIKGFIKKKVDLLIISSNETEPVTPVAVEAYRAGIPTIILDRKI 120 Query: 117 NDADIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPY 175 N + YI DN ++G + ++ + + G ++A G + + Sbjct: 121 NSDEYTTYIGADNYEIGRSIGMYISSLIKGETTILEIWGRRGSSSATERHQGFVDAMS-- 178 Query: 176 VDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQG- 234 +K+ + W ENA + + + +D V A ND A GA +A+ + Sbjct: 179 -IDPNVKI--RELDGYWYKENAYEEVLKL--DSIEDVDIVFAHNDMMALGAREAIEERDS 233 Query: 235 -LSGKVAISGQD---ADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKAD 290 L G V G D G++ +A G + Y P A ++A ++ +GQ Sbjct: 234 SLVGHVEFIGVDGLLGGGLGVEAVAQGKLDASFYYPTG--GGVAIKVAWQILSGQAYTKK 291 Query: 291 TTLNNGLKD 299 L+ + D Sbjct: 292 YALSTAMID 300 >UniRef50_B0P063 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P063_9CLOT Length = 326 Score = 228 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 66/298 (22%), Positives = 126/298 (42%), Gaps = 19/298 (6%) Query: 24 KEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVD 83 ++ G + E ++ + + E G ++ +++ Q QI+ ++ R VD Sbjct: 43 RKKLFGATYMTMNNEFYKIVNNQIRMQVEKNGDQMITLDPALDQKKQNEQIKQLVKRKVD 102 Query: 84 VLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDF-YISFDNEKVGELQAKALVD 142 + + P + + + + AK+ I V+ D + +D+ I DN K G L AK ++ Sbjct: 103 AIFLNPVDWKAVEPGLVAAKKAKIPVIVIDSQVYRSDLVAMTIVSDNYKAGVLCAKEMMK 162 Query: 143 IVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIME 202 Q N L+ + +A G + +K ++ K++ G E AL ++ Sbjct: 163 QKDQANIVLLTHNA-ARSAVDRINGFLDTIK---NNKNYKILASADTQG-QIERALPKVD 217 Query: 203 NALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMT 262 + N ID V+ ND A GA+ AL ++G V + G D G K I G T T Sbjct: 218 KIIEEYQN-IDVVMGLNDPAAMGALAALDSKGAREGVLVYGIDGSPEGKKLIKEGMMTGT 276 Query: 263 VYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTVI 320 + +A+TA A ++ G++ + ++++ + K N++ T I Sbjct: 277 AAQSPKQMADTAVNAAYQILQGEKVEKK------------KVISVQMITKKNVEQTDI 322 >UniRef50_B2T1S7 Monosaccharide-transporting ATPase n=9 Tax=Bacteria RepID=B2T1S7_BURPP Length = 339 Score = 227 bits (580), Expect = 4e-58, Method: Composition-based stats. Identities = 74/329 (22%), Positives = 132/329 (40%), Gaps = 34/329 (10%) Query: 5 NILLTLCTSLLLTNVA-------AHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAK 57 ++L + T A A +K+G A + + F A G + Sbjct: 23 SLLALAIGFGVATAHADDALPKLASKTPLKVGFAQTESNNPWRLAETKSFKDIAAKCGWQ 82 Query: 58 VFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIN 117 + + AN + Q+S I+NMI + VD+LV P + L+ VV +AK+ GI V+ DR ++ Sbjct: 83 LVMTDANSSNSKQVSDIQNMIAQHVDLLVFPPREEKPLAPVVLQAKKAGIPVILVDRDVD 142 Query: 118 ------DADIDFYISFDNEKVGELQAKALVDI-VPQGNYFLMGGSPVDNNAKLFRAGQMK 170 D +I D G A LV + + G+ + A + G + Sbjct: 143 QSVAKAGRDYITFIGSDFIDQGHRAADWLVKATGGKAKIIELEGTTGASAANDRKKGFDE 202 Query: 171 VLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQAL 230 ++ + + ++ Q D + + ++ME L A+ + + AV A ND A GAI A+ Sbjct: 203 IIAK---NPGMTIIASQSGD-FARDKGRQVMETLLQAHPD-VTAVYAHNDEMALGAIAAI 257 Query: 231 SAQGLS--GKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPK 288 A G + I D G+ IAAG +V + A ++A G++ Sbjct: 258 KAAGKQPGKDIQIVTIDGTKGGMDAIAAGELGASV-QSSPFFGPLACDVAQRYAKGEKIP 316 Query: 289 ADTTLNNGLKDVPSRLLTPIDVNKNNIKD 317 +++ +K+N++ Sbjct: 317 TWVKVSDKFY------------DKSNVQQ 333 >UniRef50_B2JP41 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Burkholderia RepID=B2JP41_BURP8 Length = 322 Score = 227 bits (580), Expect = 4e-58, Method: Composition-based stats. Identities = 70/315 (22%), Positives = 116/315 (36%), Gaps = 20/315 (6%) Query: 1 MKIKNILLTLCTSLLLTNVAAH------AKEVKIGMAIDDLRLERWQKDRDIFVKKAESL 54 MK+ L+ VAA K++ +G + + A+ Sbjct: 1 MKVATRLIAGLLVGAALTVAASVNSFAGDKQITLGFSQVGAESAWRTANTVSVKTSAKDA 60 Query: 55 GAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDR 114 G + A +E Q+ I + I + VDV+ P V+ EAK I V+ DR Sbjct: 61 GINLKFSDAQQKQENQIKAIRSFIAQKVDVIAFSPVVESGWEPVLTEAKNAKIPVILTDR 120 Query: 115 MINDADIDFYI---SFDNEKVGELQAKALVDIV----PQGNYFLMGGSPVDNNAKLFRAG 167 I+ D Y+ D + G + L + N + G+ A AG Sbjct: 121 SIDVKDTSLYVTMIGSDFLEEGRRAGRWLEERYKNEAGPINIAELQGTVGSAPANDRHAG 180 Query: 168 QMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAI 227 M+V+K + K K++ Q D + ++ME +I+ V A ND A GAI Sbjct: 181 LMEVIK---NDPKFKIIASQSGD-FTLAGGKQVMEAFAKTYGKQINVVYAHNDDMALGAI 236 Query: 228 QALSAQGLS--GKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQ 285 QA+ G+ V++ DA G + + AG + V LL ++ G+ Sbjct: 237 QAMEEAGIKPGKDVSVVSFDATKGGFEAMIAGKINVDVECSP-LLGPQLMTAVKDVVAGK 295 Query: 286 EPKADTTLNNGLKDV 300 + N + + Sbjct: 296 QLPKRIVTNETVFPM 310 >UniRef50_A6M1U1 Periplasmic binding protein/LacI transcriptional regulator n=44 Tax=Bacteria RepID=A6M1U1_CLOB8 Length = 335 Score = 227 bits (579), Expect = 5e-58, Method: Composition-based stats. Identities = 64/326 (19%), Positives = 118/326 (36%), Gaps = 33/326 (10%) Query: 1 MKIKNILLTLCTSLLL-------------------TNVAAHAKEVKIGMAIDDLRLERWQ 41 MK+K ++ + +++L T+ A + + IG A Sbjct: 1 MKLKKMMALMASAVLCIGMLSGCGGSGAGGGDSAKTSAANSSSKKIIGFAQVGAESGWRT 60 Query: 42 KDRDIFVKKAE-SLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVK 100 + D + +E Q+ I + I + VD++ + P V+K Sbjct: 61 AETDSIKSIPTLDPNFDLKFSDGQQKQENQIKAIRSFIAQKVDLIALDPVVETGWDTVLK 120 Query: 101 EAKQEGIKVLAYDRMI---NDADIDFYISFDNEKVGELQAKALVDIVPQG---NYFLMGG 154 EAK I V+ DR + +D+ ++ D G+ A+ L+D + N + G Sbjct: 121 EAKDAKIPVVIVDRKVTVSDDSLYKCFLGSDMVAEGKKAAQILIDQFGKDATLNIAELQG 180 Query: 155 SPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDA 214 + + G +K D K++ Q + ++ME L ++ +KI+ Sbjct: 181 TVGSTAMVGRQQGFNDAIK---DCPNYKIIKSQ-TGDFTRAKGKEVMEAFLKSDGDKINV 236 Query: 215 VVASNDATAGGAIQALSAQGLS--GKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLAN 272 + + ND A GAIQA+ G + I D + + G TV LL Sbjct: 237 LWSHNDDMAMGAIQAIEEYGKKPGKDIFIVSVDGIKDIFQAMVDGKANATVECNP-LLGP 295 Query: 273 TAAEIAVELGNGQEPKADTTLNNGLK 298 E+A + +G+E + Sbjct: 296 QLLEVAKNILDGKEVERTINSKESQF 321 >UniRef50_Q2YI92 Putative two-component system sensor histidine kinase n=1 Tax=unidentified microorganism RepID=Q2YI92_9ZZZZ Length = 511 Score = 227 bits (579), Expect = 6e-58, Method: Composition-based stats. Identities = 69/303 (22%), Positives = 127/303 (41%), Gaps = 28/303 (9%) Query: 19 VAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMI 78 + K IG++ + R +++ ++ + ++ +A ++E Q+ QI++++ Sbjct: 18 CSQGGKRYTIGVSQCSEDIWREKQNAELRMGAYFHDNVELKFAAAYDSDERQVQQIDSLM 77 Query: 79 NRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAK 138 N G+D+L++ P +S + A +GI V+ ++R +IS DN ++G + + Sbjct: 78 NEGIDLLIVAPNQVNTISPAIDRAYDKGIPVIVFERKTGSQKYTAFISADNYEMGHVMGE 137 Query: 139 ALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENA 197 +V + +GN + G + A G M +K D IKVVG D W A Sbjct: 138 YIVSRLHGKGNVLEIKGLAGSSPAIERHNGFMDAIK---DEPGIKVVGSLQGD-WTEATA 193 Query: 198 LKIMENALTAN-NNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADL---AGIKR 253 + + L AN +D V +ND TA GA +AL K G D GI+ Sbjct: 194 CQKSKEWLAANEGVPVDLVFGANDRTAMGAREALGE-----KPLYCGIDGLPGKNGGIQL 248 Query: 254 IAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKN 313 + + P + ++A+ + GQ + +T L + V + Sbjct: 249 VRDSLLDASFIYPTH--GDQLMDLAIRILEGQPYEKETMLMSA------------LVTHD 294 Query: 314 NIK 316 N K Sbjct: 295 NAK 297 >UniRef50_C5ERG9 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ERG9_9FIRM Length = 355 Score = 226 bits (578), Expect = 6e-58, Method: Composition-based stats. Identities = 61/312 (19%), Positives = 117/312 (37%), Gaps = 27/312 (8%) Query: 21 AHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINR 80 K++KIG + + + K AE G ++ + +A+ N E Q+ +E++I + Sbjct: 63 GGEKKLKIGFSESTYSGAWRVAEVEDVTKYAEMNGYELIMTNADSNIEKQIGDVEDLIAQ 122 Query: 81 GVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDA----DIDFYISFDNEKVGELQ 136 D++VI+P + ++ + K GI V+ D D D I D + G+ Sbjct: 123 KCDLIVIVPVDANAVAPAFEACKSAGIPVIDMDTQYLDGKWKEDFITTIRSDQYQQGQGC 182 Query: 137 AKALVDIVPQGN--YFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLP 194 A+ V V + + G+P ++A+ G + + + IKV+ Q W Sbjct: 183 AEWTVGHVGDKDTTVLEITGNPGQSDAQNRSRGFNEYVADH---SNIKVI--QQNGEWSR 237 Query: 195 ENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSG--KVAISGQDADLAGIK 252 A ++++N + K D + +D A GA+ L GL V I D + Sbjct: 238 ATAQEVVQNV-AQSGQKFDVIYCHSDEMALGALLGLKQAGLKPNEDVWIVAVDGQKEALD 296 Query: 253 RIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNK 312 I A + + + + G E + + + + Sbjct: 297 AIKADEIGAIITCTPKG-GDVLFDCINKYFAGDELEEE------------YFVHQSTITT 343 Query: 313 NNIKDTVIKDGF 324 N+ + +GF Sbjct: 344 ENVDELYEVEGF 355 >UniRef50_B0G317 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=B0G317_9FIRM Length = 345 Score = 226 bits (578), Expect = 6e-58, Method: Composition-based stats. Identities = 65/350 (18%), Positives = 134/350 (38%), Gaps = 46/350 (13%) Query: 1 MKIKN----ILLTLCTSLLLTNVAA----------------------HAKEVKIGMAIDD 34 MK K + L L +L T + KIG + D Sbjct: 10 MKKKRALRILSLILLCALTFTACKKNVGTPEDNAASKDENTEEKDKDEQESWKIGFSGID 69 Query: 35 LRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQV 94 + + ++ + ++ V+ + + Q SQI+ MI+ G++ +++ P + + Sbjct: 70 MENPYFLTLESAIKEEVDGKNCELIVKDPKTDPDMQASQIQEMIDEGINAIILSPVDWEK 129 Query: 95 LSNVVKEAKQEGIKVLAYDRMINDAD-IDFYISFDNEKVGELQAKALVDIVPQGNYFLMG 153 ++ ++ K+ +K++ D + + D +D YI DN G L + L+ P G + Sbjct: 130 ITPSLEALKEADVKIVNVDTQVKEMDYVDAYIGSDNYNAGVLCGEDLIKRCPDGGKVAIL 189 Query: 154 GSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKID 213 P N+ G + L + ++V + G + +L+ + L+ N++ I Sbjct: 190 ECPTQNSVNERITGFEETLAKAEN--GFEIVAREDTSG-EFQKSLEAAQKILSENSD-IV 245 Query: 214 AVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIA--AGTQTMTVYKPITLLA 271 A++ ND A GA A++ G++ I G D K + TV + + Sbjct: 246 AIMCGNDQMAVGAKTAMNVA-EQGQILIYGVDGSPDIKKELKKTENQIAGTVAQSPISMG 304 Query: 272 NTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTVIK 321 AA + + NG++ + + N +N+ N+ + Sbjct: 305 KDAANTVLNILNGKDYEKEIKEN------------VFMINQENVDMYGVD 342 >UniRef50_B8H8H8 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8H8H8_ARTCA Length = 322 Score = 226 bits (578), Expect = 7e-58, Method: Composition-based stats. Identities = 73/322 (22%), Positives = 130/322 (40%), Gaps = 24/322 (7%) Query: 5 NILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSAN 64 L S T+ AK IG+ + DL+ D K A+ G K+ + + Sbjct: 19 LTLTGCAGSSNATSSGEAAKTYNIGVVVLDLQDPDLAHMTDAMKKTADEKGVKLNITDSK 78 Query: 65 GNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI---NDADI 121 + ++++Q+E+++ R VD +++ P +G N K I + +D Sbjct: 79 KDVGSELNQVEDLLTRQVDAVIMQPLDGDASQNAAKRVIAANIPLFILSTEFAEGSDVGY 138 Query: 122 DFYISFDNEKVGELQAKALVDIVPQ-GNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGK 180 YI D+ G++QA+ L ++P GN G + + G K + + Sbjct: 139 KSYIGVDDTVAGQMQAEYLNKLMPNGGNLVFAAGVYGASWTDRRKNGFDKTI-----NEN 193 Query: 181 IKVVGDQWVDGWLPENALKIMENALTANN-NKIDAVVASNDATAGGAIQALSAQGLSGKV 239 K+V + G ++A + ME+ L +IDAVVA+ND A GA A++ G + + Sbjct: 194 FKIVAEFQAKG-SRDDAKRNMEDTLQRFPSGQIDAVVANNDEMAIGAASAIADAGRTAEF 252 Query: 240 A-ISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLK 298 + G D ++ I GT + TV + A E+ + NG T Sbjct: 253 KAVVGVDGTEPALQDIEGGTMSATVRQDSAGQGVKAVEVVTDFLNGGNVDNRYT------ 306 Query: 299 DVPSRLLTPIDVNKNNIKDTVI 320 L + K+N+ + + Sbjct: 307 ------LPFTLITKDNLSEFLK 322 >UniRef50_B0URZ9 Monosaccharide-transporting ATPase n=2 Tax=Gammaproteobacteria RepID=B0URZ9_HAES2 Length = 311 Score = 226 bits (577), Expect = 9e-58, Method: Composition-based stats. Identities = 71/312 (22%), Positives = 134/312 (42%), Gaps = 20/312 (6%) Query: 1 MKIKNIL-LTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVF 59 MK L L L+ +V+ ++ E + + L W ++ +A++LG V Sbjct: 1 MKRFKTLKSCLAILGLVCSVSVYSAEY--AVILKTLSNPFWVAMKEGIENEAKALGVDVD 58 Query: 60 VQSA--NGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIN 117 + ++ G+ ++Q+ E++IN+ + P + L +A ++GI ++ D I+ Sbjct: 59 IFASPSEGDYQSQLQLFEDLINKNYKGIAFAPLSPANLVMPAAKAYRKGIYLVNLDEKID 118 Query: 118 -------DADIDFYISFDNEKVGELQAKALVDIVP--QGNYFLMGGSPVDNNAKLFRAGQ 168 +++ +I+ DN VG A+ +VD + G ++ G + + + R G Sbjct: 119 IKNLQKAKGNVEAFITTDNVAVGGKAAQFIVDKLGSEGGEVAIIEGKAGNASGEARRRGA 178 Query: 169 MKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQ 228 +V V S IK+V Q D W AL + N L+ N N + A +ND A G Q Sbjct: 179 REVF---VKSSSIKLVASQPAD-WDRIKALDVATNVLSRNPN-LKAFYVANDTMAMGVAQ 233 Query: 229 ALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGN-GQEP 287 A+ G GK+ + G D K ++ T T+ + ++ ++ V+ G++ Sbjct: 234 AVINAGKQGKILVVGTDGVPEARKMVSERKLTATIAQDPAMIGAKGLKLLVDAARAGKQI 293 Query: 288 KADTTLNNGLKD 299 D D Sbjct: 294 PVDVEPKIETVD 305 >UniRef50_B0P6G6 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B0P6G6_9FIRM Length = 355 Score = 226 bits (577), Expect = 9e-58, Method: Composition-based stats. Identities = 63/333 (18%), Positives = 120/333 (36%), Gaps = 35/333 (10%) Query: 10 LCTSLLLTNVAAHA------KEVKIGMAIDDLRLERWQKDRDIFVKKAESL------GAK 57 C LL + A ++IG+ + + A++ Sbjct: 21 FCCLLLPSGCADKPSESMTPDPIRIGVTLYRQSDTFISLLASDLLDCAKARETQDNVKIT 80 Query: 58 VFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIN 117 + + GN+ TQ Q++ + +G D + + + S ++ +A+ I V+ ++R Sbjct: 81 LNILDGTGNQGTQNEQVDRFLAQGYDAICVNEVDRTAASVIIDKARAADIPVIFFNREPV 140 Query: 118 DADI-----DFYISFDNEKVGELQAKALVDIV----------PQGNY--FLMGGSPVDNN 160 D+ +Y+ D + G++Q + +VD+ G ++ G P + Sbjct: 141 GEDMQRWQNVYYVGSDPREAGDMQGRIVVDLYDENPASVDRNGDGRIQYVILEGEPGHQD 200 Query: 161 AKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALT--ANNNKIDAVVAS 218 A L + L ++ + + W A M L ++I+ + + Sbjct: 201 ATLRTESCIAALTSA--GIDVEKLASEPA-NWQRAQASAKMAQWLADEELRDRIEVIFCN 257 Query: 219 NDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIA 278 ND A GAI A A +S I G DA + I G+ TV A ++A Sbjct: 258 NDDMALGAIDAYHAAEISELPVIVGIDATPPALMAIQDGSLAGTVRNDAQGQAQAIFDLA 317 Query: 279 VELGNGQEPKADTTLNNG-LKDVPSRLLTPIDV 310 L G P+ + G P ++T +V Sbjct: 318 YALSTGANPQEAVPMLEGQYVWAPHSIVTIGNV 350 >UniRef50_Q7NMF9 Periplasmic sugar binding protein of ABC transport system n=1 Tax=Gloeobacter violaceus RepID=Q7NMF9_GLOVI Length = 317 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 66/291 (22%), Positives = 117/291 (40%), Gaps = 15/291 (5%) Query: 2 KIKNILLTLCTSLLLTNVAAHAKE----VKIGMAIDDLRLERWQKDRDIFVKKAESLGAK 57 + L LC +L+L A + E +G+++ + +++ ++A Sbjct: 8 RRFWWLAALC-ALVLGACAQNGSEGGNRPVVGVSLLTRQDAFYRELERGLKEEAAKQKLT 66 Query: 58 VFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIN 117 V + + + Q Q+EN + V +V+ P + Q + + A Q I V D Sbjct: 67 VRLDAGEFDLARQQGQLENYTVQKVAAIVVCPTDSQGIGPAIARANQADIPVFTADIRAK 126 Query: 118 DADIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYV 176 + + +I+ DN G L + + +G ++ P + G + LKPY Sbjct: 127 EGAVVSHIASDNVAGGRLAGEYAAKRLNGRGQVAIID-QPYIQSVIERVRGFEEALKPYP 185 Query: 177 DSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS 236 + I+VV DG + + +LK E+ L + K+DAV A ND +A G + A+ A G Sbjct: 186 N---IRVVARLTGDG-VRDRSLKAAEDLLQSQ-RKLDAVFAVNDESAFGVVSAIEAAGRK 240 Query: 237 GKVAISGQDADLAGIKRIAAGT--QTMTVYKPITLLANTAAEIAVELGNGQ 285 G + + G DA K IA G + + + GQ Sbjct: 241 G-IFVMGYDASEEARKLIAGGKSPLQADIAQDPYRIGQETIRAVATHLAGQ 290 >UniRef50_B0URJ4 Monosaccharide-transporting ATPase n=6 Tax=Pasteurellaceae RepID=B0URJ4_HAES2 Length = 311 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 81/315 (25%), Positives = 140/315 (44%), Gaps = 21/315 (6%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLG-AKVF 59 MK K +L LC LLLT+ A AK IG ++ + +D E ++ Sbjct: 1 MK-KTLLAMLCGGLLLTSQAVIAKNYVIGAPMNSFADKWQTYLQDAVRDFDEKHDDVQIK 59 Query: 60 VQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDA 119 + +N + Q++ ++N I++ VD L+++P + V+ + AK+ GI ++ +R ND Sbjct: 60 LADSNSDPNIQVNLVQNFIDQNVDALLVVPTDPTVVKRIGVLAKKAGIPLIVVNRKPNDE 119 Query: 120 ---DIDFYISFDNEKVGELQAKALVDIVPQGNY--FLMGGSPVDNNAKLFRAGQMKVLKP 174 + ++ D + G +Q +V+ + N ++ G + G ++ Sbjct: 120 HMQYVTSFVGSDEIEGGRIQGNFIVNTLAGKNAESLILLGPLGQDAVTKRTQGNEEIFAQ 179 Query: 175 YVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQG 234 + + IKVV Q W + L I EN L A N I+ +V++ND A GAI A G Sbjct: 180 HKN---IKVVSKQE-GRWERDRGLAIAENVL-AGNKGINVIVSNNDEMAIGAILATRKLG 234 Query: 235 LSG-KVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTL 293 + + I G DA ++ + G TV++ T AE+A G++ Sbjct: 235 IKDEDITIVGLDATPDALEYLGKG-LDATVFQSAQGQGYTGAEMAYLAAKGEKVP----- 288 Query: 294 NNGLKDVPSRLLTPI 308 +K VP L+TP Sbjct: 289 --SVKWVPFELVTPD 301 >UniRef50_C0B7M6 Putative uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0B7M6_9FIRM Length = 325 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 75/340 (22%), Positives = 136/340 (40%), Gaps = 34/340 (10%) Query: 1 MKIKNILLTLCTSLLLTNVAAHA---------------KEVKIGMAIDDLRLERWQKDRD 45 MK + + + + T++ T + +G A + K R Sbjct: 1 MKKRLLSILMVTAMCATMAVGCGTADDTKDSSSSSKGKSDYLVGFANNSDTYNYCAKFRS 60 Query: 46 IFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQE 105 E+ G + V A G+ Q QI++ I + +V+ I + ++ AK Sbjct: 61 YLKDATEAKGISITVTDAGGDTNVQNGQIDDFIVQNANVVSAISNDLDGSIPALEAAKDA 120 Query: 106 GIKVLAYDRMI---NDADIDFYISFDNEKVGELQAKALVDIVPQG-NYFLMGGSPVDNNA 161 G+ +++ + +D D Y+ NE G+ Q + L D P G + G+P D Sbjct: 121 GLPYVSFLTSVSGGDDYDGYIYVGSPNEDAGKAQGEYLCDAFPDGASILYFTGAPNDQQY 180 Query: 162 KLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDA 221 + G + LK + IK++ + V+ + + E++L + +KIDA+V ND Sbjct: 181 VDRKKGLEEALKKNPN---IKILDEYNVEN-SKDLGMSTAEDSLLSY-DKIDAIVCQNDD 235 Query: 222 TAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVEL 281 A G ++AL + G + + G D ++ I G TMT + A A+I +L Sbjct: 236 GALGVVEALKSAGKLDSIQVLGIDGSDDALQSIQDGEMTMTALQDAKAQAEAGADIFEKL 295 Query: 282 GNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTVIK 321 G +P D+ + V K+N+ D + K Sbjct: 296 KKGTDPA----------DIEDVNIPFKIVTKDNVADYLSK 325 >UniRef50_C0DAQ0 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0DAQ0_9CLOT Length = 332 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 64/281 (22%), Positives = 115/281 (40%), Gaps = 10/281 (3%) Query: 19 VAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESL--GAKVFVQSANG--NEETQMSQI 74 A+ ++ KI + L+ + + K + V + + N E Q+ + Sbjct: 47 TASTGQKYKIAFIVKSLQSAFFINMTEAAEKCGQDYADKISVEIMAPQTPFNIEEQIQLV 106 Query: 75 ENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGE 134 E I +D +VI P + + + +K+A GI V+ + N DI Y+ N VG Sbjct: 107 EQCITNKMDAIVIAPCDSEGIVPAIKKANDAGILVVTANTKANGGDIVSYVGAQNFDVGY 166 Query: 135 LQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWL 193 A AL + + QG L+ G ++ ++ G + LK Y I+++ Q D W Sbjct: 167 SLATALFEKLGGQGKVILIEGKAGNSTSEERAEGFKEALKEYP---GIELLASQPAD-WD 222 Query: 194 PENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKR 253 +A+ +MEN L ++ID V+ G I+A+ + G ++ D D I Sbjct: 223 RASAMTVMENCLQTY-DQIDGVLTLTKDMGLGTIEAIKSAGRDKEIVSMTFDVDDDVISA 281 Query: 254 IAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLN 294 + AG + + A A AV +G + + + Sbjct: 282 LKAGDLYASGNQNEQSQAYIAIMTAVFALDGYKVDSSQIMP 322 >UniRef50_A9AX36 Monosaccharide-transporting ATPase n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AX36_HERA2 Length = 335 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 66/321 (20%), Positives = 120/321 (37%), Gaps = 30/321 (9%) Query: 7 LLTLCTSLLLTNVA-AHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSA-- 63 LL C + T V+ A + KIG+ + L E +Q+ + + A + + Sbjct: 33 LLAGCGTTSATPVSTATPTKPKIGLVMKSLSNEFFQQMQAGAEEYARQNATRFDFTATGI 92 Query: 64 --NGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADI 121 + TQ++ E ++N DV+V+ P + L V +A + GI V+ D +++A Sbjct: 93 NDERDFATQIASFERLVNEQYDVIVLAPADSIALVAPVAKAVKAGIVVINIDVALDEATK 152 Query: 122 DF------YISFDNEKVGELQAKALVDIVP-QGNYFLMGGSPVDNNAKLFRAGQMKVLKP 174 + DN ++ + L + G ++ G+P +NA R G + Sbjct: 153 KAAGIDLAFFGPDNRAGAKMSGEVLAKALGAGGKVAVLEGNPEADNAVQRRLGFDDAIAD 212 Query: 175 YVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQG 234 + VV + W I L + + ++ +ND+ A GA+QAL A Sbjct: 213 GSLNL---VVAE--SGHWETSEGQSITAAWLKKYPD-LQGIMCANDSMAFGAVQALEAAN 266 Query: 235 LSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLN 294 L K+ + G D A I G TV + +A + G++ Sbjct: 267 LLDKIKVVGFDNIPAVQPLIKDGKMLATVEQYGAQMAAIGMDYGYRTLKGEKFSGWIRTE 326 Query: 295 NGLKDVPSRLLTPIDVNKNNI 315 + K+N+ Sbjct: 327 LK------------LITKDNL 335 >UniRef50_B9Z758 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z758_9NEIS Length = 313 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 82/325 (25%), Positives = 130/325 (40%), Gaps = 25/325 (7%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVK-IGMAIDDLRLERWQKDRDIFVKKAESLG---A 56 M ++ +LT L + A+ +K +G+A+ DL + A+ +G Sbjct: 1 MNLRYTVLTAAVLAGLAAPSFAARPLKSVGVAVGDLANPFFVAIGKGAEDAAKKIGGPGV 60 Query: 57 KVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI 116 KV S+ + TQ+ QIEN I VDV+++ + + V+K+A+ GI + Sbjct: 61 KVTTVSSKYDLNTQVGQIENFIANKVDVILVNASDPMGIEPVLKKARAAGI--AVVAVDV 118 Query: 117 NDADIDFYISFDNEKVGELQAKALVDIVPQ-GNYFLMGGSPVDNNAKLFRAGQMKVLKPY 175 D + DN G K + + GN ++ G PV + AG KVL Y Sbjct: 119 GAVGADATVMSDNAMAGAESCKFMAQQLGGRGNVVIVNGPPVTAVS-ARVAGCKKVLGNY 177 Query: 176 VDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGL 235 IK++ D + ++ M N LTA+ KIDAV A ND T GA A+ G Sbjct: 178 P---GIKLLSDNQDAHGSRDGGMETMANLLTAHK-KIDAVFAINDPTGIGAELAVKQAGR 233 Query: 236 SGKVAISGQDADLAGIKRIAAGT--QTMTVYKPITLLANTAAEIAVELGNGQEPKADTTL 293 S I+ D K + ++ + +A A +I ++ NG+ P Sbjct: 234 SDVKLIAAVDGAPDAEKALKDKKSLFAVSAAQNPYTMATMAVQIGYDILNGKRPAKSQ-- 291 Query: 294 NNGLKDVPSRLLTPIDVNKNNIKDT 318 LL V K N+ Sbjct: 292 ---------VLLPTPAVTKANVASY 307 >UniRef50_A6W806 Periplasmic binding protein/LacI transcriptional regulator n=9 Tax=Actinomycetales RepID=A6W806_KINRD Length = 362 Score = 224 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 75/323 (23%), Positives = 138/323 (42%), Gaps = 34/323 (10%) Query: 9 TLCTSLLLTNVAAHA--------------KEVKIGMAIDDLRLERWQKDRDIFVKKAESL 54 SL L+ A K++++G+++ D+ ++ AE+ Sbjct: 21 VGALSLALSACGAGDPNADSGGSGSSEGPKKLRVGVSVYDMSS-FITAGKEGMDAYAEAK 79 Query: 55 GAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDR 114 G ++ SAN + TQ SQ++ +N GVD ++++P L V AK GI +LA + Sbjct: 80 GIELLWNSANLDVNTQASQVDQYVNAGVDAIIVVPVQADSLQPQVASAKAAGIPLLAVNA 139 Query: 115 MINDADIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLK 173 +N DI + D+ GE Q + + D + +G ++ G + G VL Sbjct: 140 ELNSTDIAGNVQPDDVAAGEAQMQMMADAIGGKGGIVVLQGPLGQSGELNRTKGIENVLA 199 Query: 174 PYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQ 233 Y D I+V+ W + A+ ++N ++A +I VVA ND GA+QAL Sbjct: 200 KYPD---IEVLAKDTA-NWKRDEAVNKVKNWISAFGARITGVVAENDDMGLGALQALKES 255 Query: 234 GLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTL 293 G++ + + G D G+ + +G T+ + T+ + +A + NG++ + Sbjct: 256 GVT--LPVVGIDGIEDGLNAVKSGEFIGTMLQNGTVELSAGLAVAAAIANGEDVNTE--- 310 Query: 294 NNGLKDVPSRLLTPIDVNKNNIK 316 P + + K N+ Sbjct: 311 -------PVYKMPK--ITKENVD 324 >UniRef50_B2IIE3 Periplasmic binding protein/LacI transcriptional regulator n=11 Tax=Rhizobiales RepID=B2IIE3_BEII9 Length = 314 Score = 224 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 67/324 (20%), Positives = 134/324 (41%), Gaps = 25/324 (7%) Query: 3 IKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLG-AKVFVQ 61 +K+I + L+ A+ IG+++ + R +A +G + ++ Sbjct: 1 MKSIFTAAVLAALMAGTASAE---TIGVSMQNFDDNFQTLLRQGLQARASQVGGVTLQIE 57 Query: 62 SANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIND--- 118 A + Q++Q+ N I VD ++I + S + A++ GI ++ + + Sbjct: 58 DAQADIARQLNQVNNFIAARVDAIIITLTDTSAASGITAAAQKAGIPLVYLNLEPENINR 117 Query: 119 -ADIDFYISFDNEKVGELQAKALVDIVPQ------GNYFLMGGSPVDNNAKLFRAGQMKV 171 Y+ G L A+A ++ + +++ G ++ + + Sbjct: 118 LPKNQAYVGSKETDAGRLGAEAACQLLKKKGKAGQAQIYILMGDLAHQASRDRTSAVKET 177 Query: 172 LKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALS 231 L + + + ++ W+ NA+ + N +T IDA+ A++D A GAIQAL Sbjct: 178 LAA-GECKGVTIADERSAA-WMRTNAMDVTTNWITT-GRPIDAIFANSDEMAIGAIQALK 234 Query: 232 AQGLSG-KVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKAD 290 A G+S V + G +A G+ + G +TV++ + +A + AV L G+ Sbjct: 235 AAGVSKNDVIVVGVNAAQDGLVAMEDGDLHVTVFQNAKGQSASALDAAVALARGKSVDRQ 294 Query: 291 TTLNNGLKDVPSRLLTPIDVNKNN 314 VP L+TP ++ K N Sbjct: 295 VM-------VPFELVTPENMAKYN 311 >UniRef50_B8H228 Inositol ABC transporter, periplasmic inositol-binding protein IbpA n=3 Tax=Caulobacteraceae RepID=B8H228_CAUCN Length = 326 Score = 224 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 69/272 (25%), Positives = 117/272 (43%), Gaps = 7/272 (2%) Query: 16 LTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIE 75 +T A E ++ ++ +DL + R +A LG KV V A N Q+S ++ Sbjct: 28 MTGCARGGAEAEVVVSFNDLSQPFFVAMRRELEDEAAKLGVKVQVLDAQNNSSKQISDLQ 87 Query: 76 NMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDF-YISFDNEKVGE 134 +G V+++ P + + L+ + ++G+ V++ DR I ++ DN G Sbjct: 88 AAAVQGAKVVIVAPTDSKALAGAADDLVEQGVAVISVDRNIAGGKTAVPHVGADNVAGGR 147 Query: 135 LQAKALVDIVPQG-NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWL 193 A +V P G ++ P +++ G L K+V +Q Sbjct: 148 AMADWVVKTYPAGARVVVITNDPGSSSSIERVKGVHDGLAA--GGPAFKIVTEQTA-NSK 204 Query: 194 PENALKIMENALTANNN-KIDAVVASNDATAGGAIQALSAQGLSG-KVAISGQDADLAGI 251 + AL + +N LT+ + D ++ ND A GA++A+ A GL KV + G DA + Sbjct: 205 RDQALTVTQNILTSMRDTPPDVILCLNDDMAMGALEAVRAAGLDSAKVKVIGFDAIPEAL 264 Query: 252 KRIAAGTQTMTVYKPITLLANTAAEIAVELGN 283 RI AG TV + L TA AV+ Sbjct: 265 ARIKAGEMVATVEQNPGLQIRTALRQAVDKIK 296 >UniRef50_C1XFK3 Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=5 Tax=Bacteria RepID=C1XFK3_MEIRU Length = 330 Score = 224 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 67/337 (19%), Positives = 125/337 (37%), Gaps = 30/337 (8%) Query: 3 IKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQS 62 + L+L ++ + +A K+ I + + + A+ LG ++ Q Sbjct: 9 FTVLTLSLLIAVAMYGLAQQQKKYTIALIPGLTTDGFYITMHKGAEEAAKRLGVELIFQG 68 Query: 63 -ANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADI 121 + TQ+ + +I R D ++I P + L +K A + GIK++ D I + Sbjct: 69 GPEFSPTTQIPVLNAIIARKPDAILIAPTDRNQLIAPLKRAHEAGIKIITVDTFIGENGQ 128 Query: 122 D-----------FYISFDNEKVGELQAKALVDIVP-QGNYFLMGGSPVDNNAKLFRAGQM 169 Y++ DN + G + A+AL + +G ++ P + G Sbjct: 129 YQTGKGNADFPLAYVASDNVEGGRIAARALAKAIGEKGKVYVSNVKPGISTTDQREQGFK 188 Query: 170 KVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQA 229 + +K Y I V+ Q+ D A + AL N + + V +N +A GA Sbjct: 189 EEMKKYP---GITVLATQYNDN-DANKAASQLAAALARNPD-LAGVFGANLFSAIGAANG 243 Query: 230 LSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKA 289 + G G V ++ D + I I GT M V + + A E AV+ NG++ Sbjct: 244 VKNAGKRGAVKVAAFDCPESIINDIKGGTIDMAVCQHPAEMGRIAVEWAVKALNGEKIPN 303 Query: 290 DTTLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHK 326 +++ N+ K + Sbjct: 304 RYGTG------------YTVIDRANVDSAEAKAAIYS 328 >UniRef50_A6BDP6 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BDP6_9FIRM Length = 309 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 63/314 (20%), Positives = 119/314 (37%), Gaps = 23/314 (7%) Query: 8 LTLCTSLLLTNVAAHAKE----VKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSA 63 + CT+L + K+ +K G + + + + ++ G + + Sbjct: 6 IVACTTLFIAIGIHEKKDTRKQLKFGATYMTMNNPYFVNMDENIEESVQAKGDILITRDP 65 Query: 64 NGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI-NDADID 122 +++ Q QI++MIN G+DVL + P + + ++ K++ I V D + + + Sbjct: 66 LQDQKKQNEQIKDMINEGIDVLFLQPVDRNKVRPALELCKKKHIPVFVIDSEVSDTEAVV 125 Query: 123 FYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIK 182 I DN G AK ++ N ++ N+ G +K + + K Sbjct: 126 STIVSDNYDAGVQCAKDMMKKKTSANIIIVN-QKALNSINERVKGFRDTIKGHP---QYK 181 Query: 183 VVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAIS 242 +V ++ E A+K+ME + N D V+ ND A G I A+ + +V + Sbjct: 182 IVEEKESAA-EFEIAMKVMEKIIYEKKNY-DVVMGGNDPIALGCIAAMQMTDKTDQVMVY 239 Query: 243 GQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPS 302 G D G I AG T + + A + A G+ K T Sbjct: 240 GVDGSPDGKAMIKAGFLEGTAAQSPIKIGEKAVQTAYSYLAGETVKKHVT---------- 289 Query: 303 RLLTPIDVNKNNIK 316 + + +N+K Sbjct: 290 --IPVELITADNLK 301 >UniRef50_B9JQE2 D-ribose-binding periplasmic protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JQE2_AGRRK Length = 334 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 76/334 (22%), Positives = 136/334 (40%), Gaps = 19/334 (5%) Query: 3 IKNILLTLCTSLLLTNVA----AHAKEVKIGMAIDDLRLERWQKDRDIFVKK-AESLGA- 56 + L + + LL A K VK+G A+ L+ E Q K A + G Sbjct: 5 RRTTLAIIGGAGLLPIAGKVGFAADKPVKVGAAVYGLKNEYAQIWAAEIKKHPAFANGIA 64 Query: 57 KVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI 116 ++ V N + TQ SQ + M + DV + IP + V+ +A + + V+ + Sbjct: 65 ELTVFDGNYDHATQASQFDLMATQHYDVAIYIPIDSYAAKGVIHKAALKNLPVVGSNGPA 124 Query: 117 NDADIDFYISFDNEKVGELQAKALVDIVP-QGNYFLMGGSPVDNNAKLFRAGQMKVLKPY 175 ++ +I D+ G+ +A+ L + +GN ++ G + +L G K L Sbjct: 125 KSDELVSFIGSDDVAAGQYEAETLFKAIGDKGNIVVLIGPEGNLGQELRTEGNKKALDAN 184 Query: 176 VDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGL 235 D V ++ W A+ +M+N LT++ KI+ V+A ND GAI A+ A G+ Sbjct: 185 KDIT----VLERKTANWSRSEAMVLMQNWLTSHKGKINGVLAQNDEMGLGAIAAMKAAGI 240 Query: 236 SGK-VAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEP------- 287 K + + G D ++ + +G +++ + A A +IA+ G Sbjct: 241 DPKTIPVVGIDGVTDAVRAVQSGDMILSIRQDAQTQAQGAVDIALRRVIGDSYQPLAECW 300 Query: 288 KADTTLNNGLKDVPSRLLTPIDVNKNNIKDTVIK 321 K + G + V K N + + K Sbjct: 301 KKYPQMAWGNGTDKLYSVPWTYVTKENAAEFLQK 334 >UniRef50_B5GEU2 Sugar uptake ABC transporter periplasmic solute-binding protein n=9 Tax=Actinomycetales RepID=B5GEU2_9ACTO Length = 367 Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats. Identities = 58/279 (20%), Positives = 107/279 (38%), Gaps = 11/279 (3%) Query: 27 KIGMAIDD-LRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVL 85 +G + + + +A G K+ +A Q+S ++++I +G D+L Sbjct: 82 TVGFSQSEKEANPFRIAETASLKDEARKRGVKLLAVNAQSQFSKQISDVQDLIAKGADLL 141 Query: 86 VIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDA---DIDFYISFDNEKVGELQAKALVD 142 VI P N V++ A + I ++ DR IN D +I D + G A +++ Sbjct: 142 VIAPLNSDGWEPVLRAASAKKIPIVTIDRKINAGPCKDYVSFIGSDFVEQGRRAADKMIE 201 Query: 143 I-VPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIM 201 +G ++ G+ +N G + + +KVV +Q + E + Sbjct: 202 ATGGKGEVAILLGAAGNNVTTERTKGFKDRVAE--KAPGLKVVFEQ-TGDFAREKGQSVT 258 Query: 202 ENALTANNNKIDAVVASNDATAGGAIQALSAQGLS-GKVAISGQDADLAGIKRIAAGTQT 260 E + + I + A ND GA+ AL + G G V I D +K+I G + Sbjct: 259 EQLIQS-KPGIKGIYAENDEMGLGAVNALKSAGKKPGAVKIVTVDGTRNAVKQIVDGWIS 317 Query: 261 MTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKD 299 + A + G+E + D + + D Sbjct: 318 GVIESNPR-FGPLAFQTLDTFTKGEEVQQDIVIKDSAYD 355 >UniRef50_B1Y299 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y299_LEPCP Length = 318 Score = 224 bits (571), Expect = 4e-57, Method: Composition-based stats. Identities = 64/326 (19%), Positives = 122/326 (37%), Gaps = 20/326 (6%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAK-EVKIGMAIDDLRLERWQKDRDIFVKKAESLG-AKV 58 MK L C LL + A A ++ I W R+ + + G + Sbjct: 1 MKKYLTFLFACWVLLSSGSAWPADNKLNIVFIPKSSDQMFWDLMRNGVERAMQEEGQIDL 60 Query: 59 FVQSA--NGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI 116 + N + ++Q+ ++ GVD +VI P + L V++A + GIKV+ D + Sbjct: 61 TWRGPAYNDDTDSQIRILQYYTRAGVDAIVITPTDRSRLVGPVEQAVRMGIKVVVVDSAL 120 Query: 117 NDADIDFYISFDNEKVGELQAKALVDIVPQ-GNYFLMGGSPVDNNAKLFRAGQMKVLKPY 175 + + +++ DN G+L A+ L +++ Q G L+ + G + L Sbjct: 121 DGSGHLQFVTTDNHASGQLAARQLAELMGQRGRVVLLRTVAGSASTDDRARGFIDYLSA- 179 Query: 176 VDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGL 235 ++ I +V D + G A L + + DA+ A N++ G ++AL GL Sbjct: 180 -NAPAISIVADVYGGG-SAGKARHSASALLAKSAD-FDAIFAVNESATDGMLRALREAGL 236 Query: 236 SGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNN 295 +G+ G D+ ++ + + + + A + V + K Sbjct: 237 AGRKRFIGFDSTPFLLEGLEKKEIDGLIVQDPDRMGYLAIKAVVAALRNRPIKESVIHTG 296 Query: 296 GLKDVPSRLLTPIDVNKNNIKDTVIK 321 V + N + IK Sbjct: 297 T-----------TLVTRANFRRPEIK 311 >UniRef50_Q883G4 Ribose ABC transporter, periplasmic ribose-binding protein n=4 Tax=Pseudomonas RepID=Q883G4_PSESM Length = 310 Score = 224 bits (571), Expect = 4e-57, Method: Composition-based stats. Identities = 80/302 (26%), Positives = 138/302 (45%), Gaps = 18/302 (5%) Query: 19 VAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMI 78 + AKE+ IG+A+ +L+ + + + + + ++ G K+ A GN TQ+SQIE++I Sbjct: 22 GSTWAKELTIGLAVANLQADFFNQIKQSVEAEGKARGVKIITVDAQGNSSTQVSQIEDLI 81 Query: 79 NRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAK 138 R +D L+ IP VK AK GI V+A DR DA D +I+ D+ + A+ Sbjct: 82 TRQIDALIYIPAGATAAGVPVKAAKAAGIPVIAVDRNAPDAPGDTFIASDSVAGAKALAE 141 Query: 139 ALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENA 197 + + +G ++ G G + LK + +KVV +Q + W + Sbjct: 142 YVGKVTDGKGRIAILQGQLGTTPENDRAKGFQEGLKGFP---GLKVVAEQPAE-WAQDKG 197 Query: 198 LKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAG 257 + ++ L + N I DA A GA QA+ LS V + G D D+AG+K +A+G Sbjct: 198 FAVAQDLLQRDPN-ITVFFGRADAMALGAAQAVKVANLSQPVVVVGFDGDVAGLKAVASG 256 Query: 258 TQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKD 317 T+ + + A A++L G+ + +LL + K+N+ Sbjct: 257 VLQATMTQQTQKMGRMAVASALDLKAGKAVPKE------------QLLETVLTTKDNVAP 304 Query: 318 TV 319 + Sbjct: 305 FL 306 >UniRef50_Q1ASV8 Twin-arginine translocation pathway signal n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ASV8_RUBXD Length = 338 Score = 224 bits (571), Expect = 4e-57, Method: Composition-based stats. Identities = 53/306 (17%), Positives = 116/306 (37%), Gaps = 18/306 (5%) Query: 26 VKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSAN-GNEETQMSQIENMINRGVDV 84 ++ + + E + A LGA++ VQ + Q + ++ D Sbjct: 47 YRLALIVGVTGDEFYTTMECGARAAARKLGARLNVQGPEEFSPAAQTPILNAVVQSNPDA 106 Query: 85 LVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADID-FYISFDNEKVGELQAKALVDI 143 ++I P + + ++ A + I V+ D I +I IS DN + G + +AL + Sbjct: 107 ILIAPTDRTAMVGPIQSAVNQDIPVVLVDTTIEKEEIALARISSDNVEGGRMAGEALAEQ 166 Query: 144 VP-QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIME 202 + +G L+ P + + G + +K Y D I+ +G ++ P A I Sbjct: 167 IGGKGKVLLISVKPGISTTDQRKQGFEEAIKQYPD---IEYLGTEYC-NDDPTQAASITT 222 Query: 203 NALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMT 262 + L A+ + + + +N + GA + G +V++ DA ++ + G + Sbjct: 223 STLQAHPD-LAGIFGANVFSGQGAGTGVRQAGKRDQVSVVAFDASPTQVEDLRRGNLDVL 281 Query: 263 VYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTVIKD 322 + + + +IAV E + + G V ++N+ ++ Sbjct: 282 IAQHPNDIGRRGVQIAVRYLESGEEPENKQITTGF----------TTVTRDNLDAPEVER 331 Query: 323 GFHKES 328 ++ Sbjct: 332 YLYRAQ 337 >UniRef50_B8CWP1 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWP1_HALOH Length = 320 Score = 224 bits (571), Expect = 4e-57, Method: Composition-based stats. Identities = 65/307 (21%), Positives = 130/307 (42%), Gaps = 15/307 (4%) Query: 18 NVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSA--NGNEETQMSQIE 75 +++ +I ++ L W + A+ LGA++ + + Q++ I Sbjct: 23 GDVQASEKYQILVSPKGLSQSYWLTVKAGAEAAAKELGAEIVWRGPAQETDVAKQVNVIN 82 Query: 76 NMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGEL 135 + +N+ +D +V+ + L +K A + GI V+ D IN +I+ +N++ + Sbjct: 83 DFVNKKIDAIVVAATDANALIPPLKRAHEAGIPVITIDSGINADFPISHIATNNKEAAKK 142 Query: 136 QAKALVDIVP-QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLP 194 A+ L +I+ +G + + G + + Y + I +V Q+ Sbjct: 143 AAEVLANIIGKKGEVACIPFVAGAATSIARENGFKEGISNYKN---IDLVAVQYSQS-DY 198 Query: 195 ENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRI 254 A+K+ EN LTA+ N + + A+N+A A GA +AL A+G + V + G DA I + Sbjct: 199 ATAMKVTENILTAHPN-LKGIFAANEAGAVGAARALKARGKTADVILVGFDAAQTEIDAM 257 Query: 255 AAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNN 314 G + + ++ + AV G+E + L D + TP ++N Sbjct: 258 KEGIIDALIVQRPYMMGYEGVKNAVAALEGEEVEK-------LIDTGVVVATPDNMNDPE 310 Query: 315 IKDTVIK 321 + + Sbjct: 311 VYKVLFP 317 >UniRef50_A6BKA3 Putative uncharacterized protein n=6 Tax=Clostridiales RepID=A6BKA3_9FIRM Length = 355 Score = 224 bits (571), Expect = 4e-57, Method: Composition-based stats. Identities = 67/337 (19%), Positives = 129/337 (38%), Gaps = 30/337 (8%) Query: 2 KIKNILLTLCTSLLLTNVAAHAKE----VKIGMAIDDLRLERWQKDRDIFVKKAESLGAK 57 + I + L + L+T + + ++IG+ D + + + Sbjct: 18 RRSMIAVILLIAFLITGCEDKSVKRDHIIRIGVVTYTQDDPFINAMTDQLKENLKKMETD 77 Query: 58 V-----FVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAY 112 + V++ + N++ Q +E MI+ G DVL + + S +++ AKQE I VL + Sbjct: 78 LMKIITTVKNGDDNQQDQNEIVEEMIDAGCDVLCVNLVDRTAPSRIIRMAKQEDIPVLFF 137 Query: 113 DRMINDADI-----DFYISFDNEKVGELQAKALVDIV-----------PQGNYFLMGGSP 156 +R D+ +YI + E+ G +Q + + D + + Y L+ G Sbjct: 138 NREPVREDLMQWEKLYYIGCNAEQSGIMQGEIVADYIKNHPEVDKNQDGKIQYILLEGEA 197 Query: 157 VDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVV 216 +A +K L ++ + Q+ D W A M + ++I+ V+ Sbjct: 198 GHQDAISRTDYSVKTL--LEQGIDLEKLSYQFAD-WNRGQAENRMSRLIEQYGDEIELVI 254 Query: 217 ASNDATAGGAIQALSAQGLS--GKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTA 274 ++ND A GA+ A G I G D ++ I G TVY A Sbjct: 255 SNNDEMALGAVAAWQKAGYDCRNWPVIFGIDGLDDALEAIKTGKMKGTVYNDKEDQAMEL 314 Query: 275 AEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVN 311 A+++VE+ G++ + +V+ Sbjct: 315 AKLSVEIVCGKDTNRKHLKEGRYYVSEYCRVDSSNVD 351 >UniRef50_B0G492 Putative uncharacterized protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G492_9FIRM Length = 378 Score = 224 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 55/314 (17%), Positives = 119/314 (37%), Gaps = 28/314 (8%) Query: 24 KEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANG--NEETQMSQIENMINRG 81 + IG L E + + +LG K +Q+ + + E Q++ IEN +++G Sbjct: 79 SKYTIGFCGMTLNNEYHIIVANAVQQACNALGIKCEIQAGSQHASVEEQLTIIENYVSQG 138 Query: 82 VDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDF------YISFDNEKVGEL 135 VD ++++P + L + ++E + I V+ D ++D+ + + DN G+L Sbjct: 139 VDGIILVPAASEGLISALQECESANIPVINLDTKLDDSTLKTLGKDIPFYGTDNYVGGQL 198 Query: 136 QAKALVDIVPQG-NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLP 194 + + + P G ++ G N G + + +V +Q W Sbjct: 199 VGEEVAQMYPDGCKTAILRGVQGQTNDDDRYNGFLD-----KAGDVVDLVAEQHA-NWET 252 Query: 195 ENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRI 254 + ++N + AN + + + ND GA QA+ GL+ ++ I D G++ + Sbjct: 253 DQGYTAIQNIIQANKD-LQVIYCENDLMGIGAYQAVDEAGLTDQIKIFSYDGVTEGLQYV 311 Query: 255 AAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNN 314 G T + + ++ G++ ++ + N Sbjct: 312 VDGKFVSTCAQQPIKMGKLGVANMAKIFAGKDAESYIDTG------------CELITSEN 359 Query: 315 IKDTVIKDGFHKES 328 K T+ + + Sbjct: 360 AKQTLEETKKYTAE 373 >UniRef50_D1AKZ2 RbsB protein n=2 Tax=Bacteria RepID=D1AKZ2_SEBTE Length = 364 Score = 223 bits (570), Expect = 5e-57, Method: Composition-based stats. Identities = 66/305 (21%), Positives = 123/305 (40%), Gaps = 22/305 (7%) Query: 16 LTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFV---KKAESLGAKVFV----QSANGNEE 68 L + E+K+G E W+ ++ +K + G + + G+E+ Sbjct: 61 LGAMPKVEGEIKLGSVAKAFENEYWRTLKEGEELGTQKFKENGYNITLDMKSAQGEGDEQ 120 Query: 69 TQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFD 128 Q+S +E+MIN+ L++ P + L V++AK+ I V+ + I + D ++ Sbjct: 121 GQLSIVEDMINKKYTALLLSPISDGNLVPGVEKAKKNNIPVINVNDGII-KNADIFVGPK 179 Query: 129 NEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQ 187 GEL A+ + + +G ++ G P A+ G +K ++ +K+V Q Sbjct: 180 AIMNGELAAEWISKKIGGEGEVAIVIGMPKAFAARQRTLGFENWMKS--NAAGVKIVEKQ 237 Query: 188 WVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDAD 247 D W A + E + N + A+ +ND A G +A++A + + G D Sbjct: 238 NAD-WDRAKAKDLAEIWIKKYPN-LKAIFCNNDVMALGVQEAVNASKRD--ILVVGVDGI 293 Query: 248 LAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTP 307 + I G TV A E+A+ GQ+ + P L+ Sbjct: 294 KEAYESIRKGEMDATVDSFPLYKGQIAVEMALRSLGGQQLPR-------VIWTPQALIDS 346 Query: 308 IDVNK 312 +VN+ Sbjct: 347 TNVNE 351 >UniRef50_C4FY38 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FY38_9FIRM Length = 339 Score = 223 bits (569), Expect = 7e-57, Method: Composition-based stats. Identities = 72/322 (22%), Positives = 127/322 (39%), Gaps = 26/322 (8%) Query: 6 ILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESL-GAKVFVQSAN 64 + L V A K +KIG+A R K A+ ++ V + Sbjct: 13 LFCLALVPSLSPKVQAEDKNIKIGVAFYKYDDAYMSSVRVALEKIAKEHSNVELIVNDSQ 72 Query: 65 GNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFY 124 ++ Q QI+ MI +GVDVL+I + VV++AK I ++ ++R + Y Sbjct: 73 NDQAKQNDQIDVMIQKGVDVLLINVVDTGAAEAVVQKAKDANIPLVLFNREPATDVVKAY 132 Query: 125 -----ISFDNEKVGELQAKALVDIV-----------PQGNYFLMGGSPVDNNAKLFRAGQ 168 + ++ G +Q K + ++ + +Y ++ G P + A Sbjct: 133 DKARFVGTTAKEAGIIQGKMIAELWKSDKKYDRNGNGKLDYVMLIGDPENPEAIARTKYA 192 Query: 169 MKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQ 228 + L ++ +GDQ W P+ A + L + + ID ++++ND+ A GAI Sbjct: 193 VDTLTEA--KIEVNKLGDQVA-NWDPDKAKTATDAWLAKDADNIDVIISNNDSMASGAIA 249 Query: 229 ALSAQGL------SGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELG 282 AL G K+ + G DA + IA G T TV + +A ++ G Sbjct: 250 ALQGAGFNTDAKADKKIPVFGVDATEEAVDLIARGIMTGTVKQDAEGMAKAVFALSYNAG 309 Query: 283 NGQEPKADTTLNNGLKDVPSRL 304 G++ T V R+ Sbjct: 310 QGKDFLDGTDYKYDDTQVAVRI 331 >UniRef50_A6WVL9 Monosaccharide-transporting ATPase n=17 Tax=Proteobacteria RepID=A6WVL9_OCHA4 Length = 300 Score = 223 bits (569), Expect = 7e-57, Method: Composition-based stats. Identities = 70/301 (23%), Positives = 129/301 (42%), Gaps = 9/301 (2%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFV 60 M K++ L + + L +A A IG ++ + + D K+A++ + V Sbjct: 1 MFRKSLSRILFSGVALAMMAGAASAEGIGASLLTQQHPFYIALADAMKKEAQAENVPLEV 60 Query: 61 QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD 120 AN + Q++ +E+ I +GVDV++I P + + + + + +A++ GIKV+ D N+ D Sbjct: 61 SIANQDLSKQLADVEDFITKGVDVIIISPVDSKGVRSAINKAEKAGIKVITVDVPANNVD 120 Query: 121 IDFYISFDNEKVGELQAKALVDIVP-QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSG 179 + ++ DN GE A+ + + +GN ++ P + G K + Y D Sbjct: 121 VTSFVGTDNFAGGEKAAELMAKTIGEKGNVAVIDY-PTVQSVVDRIEGFKKGIAKYPD-- 177 Query: 180 KIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKV 239 IK+V Q G AL +N L AN + I + D A A A+ + L +V Sbjct: 178 -IKIVAIQP--GITRPEALSAAQNILQANPD-IVGIFGFGDDAALAAASAVKSAKLENQV 233 Query: 240 AISGQDADLAGIKRIAAG-TQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLK 298 + G D + + + + A E A ++ G+E A + G+ Sbjct: 234 KVIGFDGMEEARNAVKNDPVMVGVIAQYPDQMGKVAVETAAKVIKGEEVPAKQPIVPGVV 293 Query: 299 D 299 Sbjct: 294 T 294 >UniRef50_B0G4U9 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=B0G4U9_9FIRM Length = 338 Score = 223 bits (569), Expect = 7e-57, Method: Composition-based stats. Identities = 61/336 (18%), Positives = 121/336 (36%), Gaps = 38/336 (11%) Query: 1 MKIK-----NILLTLCTSLLLTNVAAHAKE------------VKIGMAIDDLRLERWQKD 43 MK K +++ L LLT A E + +G++ + + Sbjct: 1 MKRKNKIFRKVIIVLAVLALLTGCAGQEPEAEDTRTPTDDNLIVVGVSQEGSESVWRTAN 60 Query: 44 RDIFVKKA-ESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEA 102 + + G + ++A +E Q+ + + I++ VD +V P V++EA Sbjct: 61 TRSVKETLTKENGYFLIFKNARQKQENQIKALRSFISQRVDYIVFSPIVEDGWDTVLREA 120 Query: 103 KQEGIKVLAYDRMINDAD---IDFYISFDNEKVGELQAKALVDIVP-------QGNYFLM 152 ++ I V+ DR IN D ++ D + G K L D + Q N ++ Sbjct: 121 REAEIPVILMDRKINVKDESLYTAWVGSDFVEEGRNAGKWLEDYLKGQRFNDDQVNIVVL 180 Query: 153 GGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKI 212 G+ G ++ + + + +Q + + M L +I Sbjct: 181 QGTAGTTAMFGRTQGFEEIAAKHENWN----ILEQTNADFTTAKGEEEMRRLLNTYP-EI 235 Query: 213 DAVVASNDATAGGAIQALSAQGLS----GKVAISGQDADLAGIKRIAAGTQTMTVYKPIT 268 D +V+ ND GA++A+ + G + G + + D ++++ G + V Sbjct: 236 DVLVSQNDDMTFGALEAIQSAGRTTGTGGDITVISFDGTKKALEKVKTGAINVDVECNPY 295 Query: 269 LLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRL 304 EI L GQ + D + + + L Sbjct: 296 -QGKYIEEIIQALETGQSIEKDNYVEEKVFTQKNVL 330 >UniRef50_B5GKD2 D-ribose ABC transporter permease protein n=1 Tax=Streptomyces sp. SPB74 RepID=B5GKD2_9ACTO Length = 432 Score = 223 bits (569), Expect = 8e-57, Method: Composition-based stats. Identities = 68/311 (21%), Positives = 125/311 (40%), Gaps = 20/311 (6%) Query: 11 CTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQ 70 C+ + + +GMA L + +A+ G +V A G+ Sbjct: 132 CSEDGAASGGKGDGDYTVGMANFTLSGPYFVGMDKAVKARAKKKGVEVVSTDAGGDAAKL 191 Query: 71 MSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNE 130 S +E+++++ VD ++I + V+ K G + DR +I DNE Sbjct: 192 ASNVEDLLSKNVDAVIISGGPLESAPAVLNALKSAGKPAILVDRKFRSGTYASWIGPDNE 251 Query: 131 KVGELQAKALVDIVPQ-GNYFLMGGSPVDNN-AKLFRAGQMKVLKPYVDSGKIKVVGDQW 188 +G + L + + L+ G P DN+ G K L D+ I++V Sbjct: 252 AIGRQDGEFLAAKLGKDATVALIKGGPADNSIGLARTTGVKKAL----DAAGIRMVEGPD 307 Query: 189 VDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADL 248 W + L +ME+ L ++ + +DAV NDA GA +A+ G ++ ++G D Sbjct: 308 YGNWASDGGLTVMESLLASHKD-LDAVFCENDAMCLGAQRAVKDAGREKEIVLAGVDGQA 366 Query: 249 AGIKRIAA-GTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTP 307 ++ IAA G +T + + + AV++ +G++P+ DT ++ Sbjct: 367 EALQAIAAGGNYLVTGLNDADQIGSLGLDRAVDILDGKKPEKDT------------VVDS 414 Query: 308 IDVNKNNIKDT 318 V K N Sbjct: 415 PQVTKENAAKY 425 >UniRef50_C2L0R0 Ribose ABC superfamily ATP binding cassette transporter, binding protein n=2 Tax=Clostridiales RepID=C2L0R0_9FIRM Length = 333 Score = 223 bits (569), Expect = 8e-57, Method: Composition-based stats. Identities = 69/299 (23%), Positives = 131/299 (43%), Gaps = 24/299 (8%) Query: 22 HAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRG 81 + IG+++ + + + ++A+ G + VQ A G+ Q+ Q+++ I + Sbjct: 55 KGEAKTIGVSLLNSTHVFYNSIQTAMEEQAKEYGWTLDVQDAAGDANKQLGQVQDFITKK 114 Query: 82 VDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALV 141 VD +VI P N ++++ A++ GI V D + + +++ DN+K G+L A+ +V Sbjct: 115 VDAIVIAPTNSAGSKSMIELAEKAGIPVFTMDIASDGKPVT-HVATDNKKGGQLAAEYVV 173 Query: 142 DIV---PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENAL 198 + + +GN ++ S + G LK ++ IKVV Q G + A Sbjct: 174 NNILTEKKGNVAVITYSE-IESCVDRETGFTDYLKE--NAPDIKVVDVQNYSG-DQQKAA 229 Query: 199 KIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAA-G 257 +M+N L N + ID V D A GA+ +++A + K I G D + G+ I G Sbjct: 230 DVMQNMLLKN-DNIDVVFCVGDPAAIGALSSITAANAATK--IIGYDGNPEGVAEIKKGG 286 Query: 258 TQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIK 316 V + + T E + G++ ++ L+ P ++ N K Sbjct: 287 NWVADVAQDPAGIGKTTLEAIKKHLEGEKVDSEI------------LIAPYIIDAKNAK 333 >UniRef50_D2LSY2 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LSY2_BACS4 Length = 314 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 69/326 (21%), Positives = 137/326 (42%), Gaps = 29/326 (8%) Query: 1 MKIKNILLTLCTSLLLTNVA---AHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESL--- 54 MK K + L + + LL+ + + E +G+A+ +A++L Sbjct: 1 MK-KVLFLLVASILLIVGCSEDTSGDGETVLGLAMPSATHGWMGALIQNAEDQAKALVED 59 Query: 55 -GAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYD 113 ++ + N Q++ +E++I +GVD +V++P LS + + ++ GI ++ D Sbjct: 60 GTIDDYIFTTADNPSAQVNNVEDLIAQGVDAIVMLPIESDALSPIALQVEEAGIPLVIVD 119 Query: 114 RMINDADIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVL 172 R + + + DN G + ++ + G + G P ++ + G + + Sbjct: 120 RELTNDAATVVVKGDNYGAGVNAGEYFMEQLGGNGKVVEIAG-PSNSVTQQRSDGFREAI 178 Query: 173 KPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSA 232 + I++V Q + + E +L++MEN LT+ +IDAV +D A G +QA++ Sbjct: 179 ----EGSDIEIVASQSGE-FSTETSLQVMENILTSQP-EIDAVYTQDDGMALGVLQAINE 232 Query: 233 QGLSGKVAISGQDADLAGIKRIA-AGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADT 291 + I+G + I G T T L+ I +L NG++P Sbjct: 233 ANRTDIQFITGVAGSKDVYEIIMDDGLITATFLYSP-LMVKEGVIIGADLANGEDP---- 287 Query: 292 TLNNGLKDVPSRLLTPIDVNKNNIKD 317 D ++ V K+N+ D Sbjct: 288 -------DSAEVVVPATPVTKDNVDD 306 >UniRef50_C9XJ75 D-ribose ABC transporter, substrate-binding protein n=4 Tax=Clostridium difficile RepID=C9XJ75_CLODC Length = 320 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 67/338 (19%), Positives = 135/338 (39%), Gaps = 40/338 (11%) Query: 1 MKIKNILLTLCTSLLLTN----------------VAAHAKEVKIGMAIDDLRLERWQKDR 44 M+++ IL +L + K++ IG++ L+ + + Sbjct: 1 MRVRKILSLGIAGILAIGMLTGCSMEGPSKSDNKGGSDKKDLTIGVSTITLQHQFFIDID 60 Query: 45 DIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQ 104 + +KA+ LG KV V + + Q S IE+ I + VD ++++ + + V+ A + Sbjct: 61 EGIKEKAKELGVKVIVNDPDQDVAKQTSAIEDFIQQNVDGMIVLGTDNSAIVPAVEGAFE 120 Query: 105 EGIKVLAYDRMINDADIDFYISFDNEKVGELQAK----ALVDIVPQGNYFLMGGSPVDNN 160 + + V+ D ++N +I Y+ + G+ + + + + + + Sbjct: 121 K-MPVVTVDAVLNTENITSYVGTVSYDAGKKLGEYTKKYIDEKLGGKSEIAIVTDLKSQI 179 Query: 161 AKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASND 220 G LK S +K++ Q G+ E +L +EN + +N + +D + A+ + Sbjct: 180 QMQRIDGFKDALK---GSANVKILNSQP--GYDREESLNTVENLIQSNPD-VDIIYATAE 233 Query: 221 ATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVE 280 + GA AL + + V I G D I GT + + + A E V+ Sbjct: 234 NSVLGAKAALESA-KNKDVKIVGFDLTEEASSGITDGTILAMIQQQPKEMGRLAVEAVVK 292 Query: 281 LGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDT 318 G++ + + VP+ L +K NIKD Sbjct: 293 AIKGEKVEKN-------IPVPALLY-----DKENIKDF 318 >UniRef50_A8RSF4 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RSF4_9CLOT Length = 315 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 62/330 (18%), Positives = 124/330 (37%), Gaps = 27/330 (8%) Query: 1 MKIK--NILLTLCTSLLLTNVAAHAKEVK------IGMAIDDLRLERWQKDRDIFVKKAE 52 MKI ++LT LLL + G + + + E Sbjct: 1 MKIGTGLLILTAGAMLLLGGCGHGDASGRQHEARLFGATYMTRNNPYFDVLNEGIEEVVE 60 Query: 53 SLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAY 112 + G + + ++E Q QI+ MI+ G+ +L + P + + + + ++ G+ ++ Sbjct: 61 ANGDILLTRDPLQDQEKQNEQIQEMIDEGIQMLFLNPVDWEKVQPALDACREAGVGIINV 120 Query: 113 DRMINDAD-IDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKV 171 D ++ D D + I DN + G+L A ++ + ++ +P+ + G + Sbjct: 121 DTVVKDRDSVISIIETDNYQAGQLCALDMMKRKDEAKIVILD-NPIQTSITNREQGFLDT 179 Query: 172 LKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALS 231 + D+ +VV + G E + +M + L + D ++ ND TA GA+ AL Sbjct: 180 IA---DNHNYQVVYREAAAG-EIEVSSHVMADLLRRD-ISFDVILGGNDPTALGALAALQ 234 Query: 232 AQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADT 291 V I G D + G T T + + AAE A +G+ + Sbjct: 235 QARREEGVLIYGIDGSPDFKAILDVGYVTGTSAQSPRSIGRKAAETAYRYLDGEPVEK-- 292 Query: 292 TLNNGLKDVPSRLLTPIDVNKNNIKDTVIK 321 + + ++N+ + I Sbjct: 293 ----------YISMPSTMITRDNLHEFEID 312 >UniRef50_C3KM03 Ribose ABC transporter, ribose-binding protein n=1 Tax=Rhizobium sp. NGR234 RepID=C3KM03_RHISN Length = 312 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 67/333 (20%), Positives = 131/333 (39%), Gaps = 32/333 (9%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFV 60 MK ++ T++ L +A+A + IG+ I +A + V Sbjct: 1 MKR---MIIGTTAMFLAASSAYAGD--IGVTIAS-NDTFLAVMVQAMKDEAAKTNQPLQV 54 Query: 61 QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIND-- 118 + A+ + Q+SQI+N I VD +++ + K A GI ++ + +D Sbjct: 55 EFADADVNKQLSQIQNFIAAKVDAIIVNVVESTATPTITKMAADAGIPLVYVNNTPSDLD 114 Query: 119 --ADIDFYISFDNEKVGELQAKALVDIVP------QGNYFLMGGSPVDNNAKLFRAGQMK 170 +I G LQAK + ++ ++ G + A+ Sbjct: 115 QLGPKAAFIGSQEIDAGTLQAKEVCRVLKEEGKTEDAGILIIQGVLAQHAAEQRSKAVHD 174 Query: 171 VLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQAL 230 V+ + +K++ +Q W P A +M N +TA + + AV+++ND A GA+ +L Sbjct: 175 VVAT-PECNFMKIIDEQTAQ-WDPVKAQDLMTNWITAGHKPV-AVLSNNDDMALGAVNSL 231 Query: 231 SAQGLS-GKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKA 289 A G V ++G DA + + G TV++ + + A++L G++ ++ Sbjct: 232 KAAGWEMKDVIVAGIDATKEAMHYVKTGDLDATVFQDAVGQGAGSVDAAIKLAKGEKVES 291 Query: 290 DTTLNNGLKDVPSRLLTPIDVNKNNIKDTVIKD 322 + VN N+ + K+ Sbjct: 292 PVW------------IPFELVNAANVDTYLNKN 312 >UniRef50_A0R773 Sugar ABC transporter substrate-binding protein n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0R773_MYCS2 Length = 332 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 71/310 (22%), Positives = 130/310 (41%), Gaps = 16/310 (5%) Query: 7 LLTLCTSLLLTNVAAHAKE-VKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSA-- 63 L+ L +T + VK+G+ + R+ +A+ GA++ + Sbjct: 16 LMAGSLVLGMTACGGSGSDGVKVGLITKTDSNPYFVHLREAAQAQADKDGAQLIAVAGAF 75 Query: 64 NGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD-ID 122 +G+ E Q++ IENM+ +GV ++I P + + + +K+A+ G+ V+A D + D +D Sbjct: 76 DGDNEGQVTAIENMVGQGVKGILITPNSSTGVLDAIKKARDAGVVVIALDTATDPEDAVD 135 Query: 123 FYISFDNEKVGELQAKALVDIVPQG--NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGK 180 + DN+ G Q K + + ++ G+P G ++ +S Sbjct: 136 ATFATDNKAAGVAQGKWVKAALGNTPPQVVMLDGTPGGTVDTFRHDGFLEGFGLTDNSP- 194 Query: 181 IKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVA 240 ++VG + A MEN L ++A+ N+ A GA QA+ A G + +V Sbjct: 195 -EIVGQENT-NGDQTKAQTAMENLLQRAPG-VNALYTINEPAAAGAYQAIQAVGRADQVT 251 Query: 241 ISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDV 300 I D G+ + AG TV + +A + V+ D T +G D Sbjct: 252 IGSIDGSCTGVADVKAGKIGATVMQFPAKMAELGVQAVVKFAE------DGTKPSGFNDT 305 Query: 301 PSRLLTPIDV 310 S L+T + Sbjct: 306 GSELITDKPM 315 >UniRef50_C1XS39 Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XS39_9DEIN Length = 320 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 66/311 (21%), Positives = 125/311 (40%), Gaps = 19/311 (6%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFV 60 M++ T + L A+++ I + W A+ + + Sbjct: 1 MRL-LTASTAVLAALAWGTLGFAQQLTIAALMKTTANPFWGAMEAGIRDAAQKGNVNLIL 59 Query: 61 QS--ANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIN- 117 Q+ + + E Q++ N++ R LV+ N L +K+A Q+ I ++ D ++ Sbjct: 60 QAVASETDVEPQLNACLNLLQRKPQALVVAAINSVNLLPCLKQANQQNIPIVDLDGNLDP 119 Query: 118 ------DADIDFYISFDNEKVGELQAKALVDIVPQG---NYFLMGGSPVDNNAKLFRAGQ 168 I F IS DN + G A+ +V + QG ++ G + R G Sbjct: 120 AVLQREGVKIAFSISSDNRRAGASAAEYVVSKLGQGFSGKVLVIEGLAGNVTGAARRDGF 179 Query: 169 MKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQ 228 + LK + ++V D W A I + L + + + A+ +ND A GA++ Sbjct: 180 TERLKQI--APNAQIVATLPGD-WDRLKAANITNDTLQRHPD-LAAIYCANDTMALGAVE 235 Query: 229 ALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPK 288 A+ A G KV + G D + +K I AG +V + L+ + A E +++ G++ Sbjct: 236 AVFAAGK--KVLVVGTDGNSDAVKSIRAGRLNASVAQLPFLVGSRAIENVLKVIKGEQVD 293 Query: 289 ADTTLNNGLKD 299 + + D Sbjct: 294 PKIIVPTLVID 304 >UniRef50_B2ILF2 Periplasmic binding protein/LacI transcriptional regulator n=60 Tax=Proteobacteria RepID=B2ILF2_BEII9 Length = 333 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 73/322 (22%), Positives = 134/322 (41%), Gaps = 23/322 (7%) Query: 2 KIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLG--AKVF 59 IK +L+ +L A +G+++ L + KA+ + KV Sbjct: 23 MIKQLLMGSAILVLAMGAAGAKDLKSVGVSVGSLGNLYFVALSQSAEAKAKEINPDVKVI 82 Query: 60 VQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDA 119 +N + Q +QI+N I GVD++++ + + ++ +K A+ GI V+A D + Sbjct: 83 TVDSNYDLNKQFNQIDNFIASGVDLILLAAADPKAIAPAIKRAQNAGIVVMATD--VAAV 140 Query: 120 DIDFYISFDNEKVGELQAKALVDIVP-QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDS 178 D + +N + GE+ + +VD + G ++ P ++ +G K L ++ Sbjct: 141 GADATVQTNNVQAGEIACQYIVDKLGAAGGQIIIQNGPQISSIIDRVSGCRKSLA---NN 197 Query: 179 GKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGK 238 KI ++ D + +KIM+ LT + KIDAV D A G+ A G + + Sbjct: 198 PKITILSDDQNGKCSRDEGMKIMQGHLTRH-RKIDAVFTVCDPQATGSDLAAQQFGRN-E 255 Query: 239 VAISGQDADLAGIKRIAAG--TQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNG 296 I+ D K G + + +A A +I E+ NG++P Sbjct: 256 FFIASVDGAPDIEKAFKGGNTRIQASASQDPYGMAQQAVQIGYEIMNGKKP--------- 306 Query: 297 LKDVPSRLLTPIDVNKNNIKDT 318 D P L+ + K+N+ D Sbjct: 307 --DNPMILMPSTLLTKDNVADY 326 >UniRef50_A8SGU5 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SGU5_9FIRM Length = 356 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 68/312 (21%), Positives = 121/312 (38%), Gaps = 31/312 (9%) Query: 27 KIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLV 86 IG+ I R + +G V + ++ TQ QI + +GVDVLV Sbjct: 60 NIGVCIYQFADNFMTLYRADLEGYLKDMGYSVTIMDGKNDQNTQTEQINTFLQQGVDVLV 119 Query: 87 IIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADID------FYISFDNEKVGELQAKAL 140 I P +V G ++ +R ++ +D Y+ D + G Q + + Sbjct: 120 INPVQTTSAQTIVDTVSPSGTPIVFINREPEESVLDSYKGKCCYVGADARQSGTYQGELI 179 Query: 141 VDI------VPQGNY--FLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGW 192 ++ G + G P + +A+ +K L D+ K +++D W Sbjct: 180 LETETQGDINGDGKITYIMCKGDPENIDAQYRTEYSIKAL---TDANKEVECLYEYLDNW 236 Query: 193 LPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS--GKVAISGQDADLAG 250 A + + NAL+ +KI+ V +NDA A GA+Q++ G + V + G DA + Sbjct: 237 DQTTAQQDVANALSQYGDKIEVVFCNNDAMALGALQSIQQAGRTVGKDVYLVGVDALVEA 296 Query: 251 IKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDV 310 ++ + G T TV A AAE G++ + + + V Sbjct: 297 VQNVVDGNMTGTVLNDDVGQATKAAEATKLFVEGKDVEK------------YYWVDYVKV 344 Query: 311 NKNNIKDTVIKD 322 K+N + +D Sbjct: 345 TKDNASQYLKED 356 >UniRef50_Q97J33 Ribose ABC transporter (Ribose-binding periplasmic component) n=2 Tax=Firmicutes RepID=Q97J33_CLOAB Length = 325 Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats. Identities = 68/299 (22%), Positives = 117/299 (39%), Gaps = 19/299 (6%) Query: 23 AKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGV 82 K G ++ D ES G + + A ++ QM QI I V Sbjct: 41 GSRKKFGATYMTTNNRFYEIINDEIRSVVESNGDILVTRDAALDKNKQMQQIYEFIKLKV 100 Query: 83 DVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD-IDFYISFDNEKVGELQAKALV 141 + I P + + + + AK GI V+ D + D + + DN G AK L+ Sbjct: 101 KAIFINPVDWKQIKPALIAAKNAGIPVIVVDTPVYDDKLVACTVISDNYDAGVQCAKYLM 160 Query: 142 DIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIM 201 + N L+ S + G + + S + K+V +G + + ++ Sbjct: 161 KSKSKANIMLIEHSK-AKSGIDRIKGFVDTIGA---SKQYKIVAAGDSEG-QLDKTMSLV 215 Query: 202 ENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTM 261 ++ + + N +DA++A ND +A GA+ AL GL GKV + G D I G T Sbjct: 216 DDLIKKHTN-VDAIMALNDPSALGALAALKENGLLGKVMVFGVDGSPEAKTMIHDGFMTA 274 Query: 262 TVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTVI 320 T + + + AAE A ++ G+ K D ++ ++K N+ I Sbjct: 275 TSAQFPNKIGHIAAEKAYDILKGKRLKRD------------VIVPISLISKENLLKYEI 321 >UniRef50_C0VSF4 D-ribose ABC superfamily ATP binding cassette transporter, binding protein n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VSF4_9CORY Length = 306 Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats. Identities = 69/326 (21%), Positives = 140/326 (42%), Gaps = 31/326 (9%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEV------KIGMAIDDLRLERWQKDRDIFVKKAESL 54 M K+++L L L+ + ++V + +A+ + + + R KA L Sbjct: 1 MLRKSLVLLTAGILTLSGCSGTPRDVPAAGSRAVTLALSTEKNPFFLQVRYGAQAKANEL 60 Query: 55 GAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDR 114 G + V A + E Q +Q+++ ++ GV V+ P + + L+ V + ++GI + DR Sbjct: 61 GIDLTVLDAGDDAEVQAAQLDD-VSSGVA--VVNPADSEALAPAVSQLNEKGIPAITVDR 117 Query: 115 MINDADIDFYISFDNEKVGELQAKALVDIVP-QGNYFLMGGSPVDNNAKLFRAGQMKVLK 173 I AD+ I +N + G A L + QG ++ G +++ G + + Sbjct: 118 TITGADVAALIDSNNTEGGAAAASVLAKAIRAQGEVIVLRGIEGSSSSAERYEGFTQAMA 177 Query: 174 PYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQAL-SA 232 + +++V + D + + A ++ + L A++ + + A ND A GA+ AL Sbjct: 178 EHPR---VRIVAAEAAD-FDRDTARDLVTDLL-ADHPDVAGIFAENDEMALGAVDALGER 232 Query: 233 QGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTT 292 G V + G D G++ + T+ + + L TA E A +L +G+ ++ T Sbjct: 233 AGKD--VKVVGFDGTEEGVRAVKNRKLVATIAQQSSELGATAIEQAGKLLDGEAAESVHT 290 Query: 293 LNNGLKDVPSRLLTPIDVNKNNIKDT 318 + V ++NI+ Sbjct: 291 -------------PVMVVTRDNIEKY 303 >UniRef50_D1BCK3 Multiple monosaccharide-binding protein n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BCK3_SANKS Length = 376 Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats. Identities = 102/345 (29%), Positives = 169/345 (48%), Gaps = 30/345 (8%) Query: 16 LTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIE 75 + AA A +G+A+ RW +D D + E+LG +V +Q A + TQ+ Q++ Sbjct: 31 CSTDAAGADGSLVGVAMPTTTSLRWIEDGDNLKAQLEALGYQVDLQYAENDVPTQVDQLQ 90 Query: 76 NMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI-NDADIDFYISFDNEKVGE 134 +MI+ G D+LV+ +G L++ + +A GI V+AYDR+I D+D+Y +FDN +VG Sbjct: 91 SMIDAGADLLVVGSIDGTALTDQLAQAADAGIPVIAYDRLIRESPDVDYYATFDNFRVGT 150 Query: 135 LQAKALVDIVP-----------QG--NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKI 181 QA +L+ + +G + GS DNNA +F G VL+PY+DSG + Sbjct: 151 QQATSLLQGLGVLDEAGEPTGEEGPYTVEVFAGSSDDNNATVFYEGAFSVLQPYLDSGVL 210 Query: 182 KVVGDQW------VDGWLPENALKIMENALTANNNK----IDAVVASNDATAGGAIQALS 231 +V + ++ W + + M L + + ID V++ D + I L Sbjct: 211 EVPSGETDFATIAIEAWDAKVGGERMTRLLDSVYSGTDLVIDGVLSPYDGISIAIIDVLK 270 Query: 232 AQGL----SGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEP 287 G + GQDA+ IK + AG Q ++YK LA + L G P Sbjct: 271 GAGYGTAARPLPVVVGQDAEAPSIKSVIAGEQYSSIYKDTRQLAEVTVAMGDALLKGTAP 330 Query: 288 KAD--TTLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 + + T+ +NG+ VP+ LL P+ V N + ++ G++ E +L Sbjct: 331 EVNDVTSYDNGVTTVPTYLLAPVVVTATNYESLLVGGGYYTEEDL 375 >UniRef50_C5EU51 D-galactose-binding periplasmic protein n=4 Tax=Clostridiales RepID=C5EU51_9FIRM Length = 350 Score = 221 bits (563), Expect = 3e-56, Method: Composition-based stats. Identities = 85/345 (24%), Positives = 140/345 (40%), Gaps = 40/345 (11%) Query: 1 MKIKNI-LLTLCTSLLLTNV-----------AAHAKEVKIGMAIDDLRLERWQKDRDIFV 48 MK I LL +C + + ++IG+ + R Sbjct: 1 MKRNWIYLLAVCLGIGILIGFWQYRENEGQRQTKKNSIRIGVLLYRGDDTFIGTLRAGLE 60 Query: 49 KKAESL------GAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEA 102 KA+ K+ + + G++ TQ SQ+E +I+ G D L I + S ++ +A Sbjct: 61 DKAKEYEQKTGIKVKLDILDSKGSQNTQNSQVERLISLGCDALCINSVDRSSASIIIDKA 120 Query: 103 KQEGIKVLAYDRMINDADID-----FYISFDNEKVGELQAKALVDIVPQ--------GN- 148 G V+ ++R + D++ +Y+ D ++ LQ ALVD + GN Sbjct: 121 MDAGTPVVFFNREPVEEDMNRWEKLYYVGADAKESAVLQGDALVDAYRKDSRTLDANGNG 180 Query: 149 ---YFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENAL 205 Y L+ G ++ + ++ LK K+ G + W A +ME L Sbjct: 181 LVSYVLLEGETSHQDSLIRTEWSIQTLKD-GGVPLEKITGG--IANWDRSQASALMEQWL 237 Query: 206 TANNNKIDAVVASNDATAGGAIQALSAQGL-SGKVAISGQDADLAGIKRIAAGTQTMTVY 264 +I+ VV++ND A GAI A++ G+ + + + G D GIK + GT TV Sbjct: 238 KEYPGQIELVVSNNDDMALGAIDAMNRAGIGANSIKVVGIDGTPVGIKALEEGTLFATVE 297 Query: 265 KPITLLANTAAEIAVELGNGQEPKADTTLNNG-LKDVPSRLLTPI 308 A +IA L Q+PK+ L NG P R+LT Sbjct: 298 SDKERYAQAIFDIAWSLSLDQDPKSVVPLVNGKYYWCPQRVLTQE 342 >UniRef50_P44883 D-galactose-binding periplasmic protein n=246 Tax=Bacteria RepID=DGAL_HAEIN Length = 331 Score = 220 bits (562), Expect = 4e-56, Method: Composition-based stats. Identities = 66/340 (19%), Positives = 142/340 (41%), Gaps = 29/340 (8%) Query: 1 MKIKNILLTLCTSLLLTNVAAH-AKEVKIGMAIDDLRLERWQKDRDIFVKKAESLG-AKV 58 MK +L T+ ++ L + +A A + +IG+ I R K+A+ +G K+ Sbjct: 1 MKKTAVLSTVAFAIALGSASASFAADNRIGVTIYKYDDNFMSLMRKEIDKEAKVVGGIKL 60 Query: 59 FVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRM--- 115 + + + Q Q++ ++++GV L I + ++ +AK + I V+ +++ Sbjct: 61 LMNDSQNAQSIQNDQVDILLSKGVKALAINLVDPAAAPTIIGKAKSDNIPVVFFNKDPGA 120 Query: 116 --INDADIDFYISFDNEKVGELQAKALVDIV---------PQGNY--FLMGGSPVDNNAK 162 I + +Y+ D ++ G +Q + G L+ G P +A+ Sbjct: 121 KAIGSYEQAYYVGTDPKESGLIQGDLIAKQWKANPALDLNKDGKIQFVLLKGEPGHPDAE 180 Query: 163 LFRAGQMKVL-KPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANN-NKIDAVVASND 220 + ++ L + + ++ + W A ++ L+++ N I+ ++++ND Sbjct: 181 VRTKYVIEELNAKGIQTEQLFI----DTGMWDAAMAKDKVDAWLSSSKANDIEVIISNND 236 Query: 221 ATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVE 280 A GA++A A G K+ I G DA ++ I+ G TV +++ Sbjct: 237 GMALGALEATKAHGK--KLPIFGVDALPEALQLISKGELAGTVLNDSVNQGKAVVQLSNN 294 Query: 281 LGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTVI 320 L G+ T + V + + V+K+N+ D + Sbjct: 295 LAQGKSATEGTKWELKDRVV---RIPYVGVDKDNLGDFLK 331 >UniRef50_A8I1T9 ABC transporter sugar-binding protein n=3 Tax=Proteobacteria RepID=A8I1T9_AZOC5 Length = 324 Score = 220 bits (562), Expect = 5e-56, Method: Composition-based stats. Identities = 68/323 (21%), Positives = 127/323 (39%), Gaps = 24/323 (7%) Query: 2 KIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQ 61 K+K + L +LL T+ A + I + + +Q R A+++GAKV Sbjct: 3 KLKLFGVVLPAALLATSAFAADE--TIAVFTKNQTNPYFQTVRVGAEAAAKAMGAKVVHY 60 Query: 62 SAN--GNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDA 119 + Q+SQIE++I + +V +P + + + V++ I V+ Sbjct: 61 IPTKPDSIPEQLSQIEDVIVKKPSAIVFVPVDYKAMVPGVEQINDAKIPVVNVTDRSAGG 120 Query: 120 DIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDS 178 ++ D+ +G + L+ + +GN ++ G G LK + D Sbjct: 121 KFLAFVGADDYSLGLETGRYLLKEMGGKGNVVILEGVKGSLTNVDRVRGFNDALKEFKD- 179 Query: 179 GKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGK 238 +K++ Q + L++MEN + ++ +ID V+A+NDA A GAI+AL K Sbjct: 180 --VKLLASQPA-NYQRLQGLQVMENLMQSHP-QIDGVLAANDAMAIGAIEALDGANRKAK 235 Query: 239 VAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLK 298 + G + + I +G + L +A+ + Sbjct: 236 --VVGINGTKEAVDAIKSGKLLASGDYNGFLQGCIGTMVAIRALRKETI----------- 282 Query: 299 DVPSRLLTPIDVNKNNIKDTVIK 321 V +L P VN +N K + Sbjct: 283 -VNEVVLKPTVVNASNYKPYDVP 304 >UniRef50_B9K719 Sugar ABC transporter, periplasmic sugar-binding protein n=7 Tax=Thermotogaceae RepID=B9K719_THENN Length = 323 Score = 220 bits (562), Expect = 5e-56, Method: Composition-based stats. Identities = 58/327 (17%), Positives = 115/327 (35%), Gaps = 20/327 (6%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFV 60 M+ + L++ L+ + IG+ + W + ++LG Sbjct: 1 MRKLLVFLSVVLITGLSLA------LTIGVIGKSV-HPYWSQVEQGVKAAGKALGVDTKF 53 Query: 61 QSAN-GNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDA 119 + Q+ +E+ I GVD + I P + + +K+A + GI V+ D D+ Sbjct: 54 FVPQKEDINAQLQMLESFIAEGVDGIAIAPSDPTAVIPTIKKALEMGIPVITLDTDSPDS 113 Query: 120 DIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDS 178 YI DN + G + +++ +G + GS N+ G + Sbjct: 114 GRYVYIGTDNYQAGYTAGLIMKELLGGKGKVVIGTGSLTAMNSLQRIQGFKDAIAD---- 169 Query: 179 GKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGK 238 +I++V D A+ + E AL A+ + +DA + G GK Sbjct: 170 SEIEIVDILN-DEEDGARAVSLAEAALNAHPD-LDAFFGVYAYNGPSQALVVKNAGKVGK 227 Query: 239 VAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLK 298 V I D ++ + G T+ + ++ + + L N + + + Sbjct: 228 VKIVCFDTTPDILQYVKEGVIQATMGQRPYMMGYLSVTVLY-LMNKIGVQNTLMMLPKVT 286 Query: 299 ---DVPSRLLT-PIDVNKNNIKDTVIK 321 V + T V N+ + + K Sbjct: 287 VDGKVDYVIDTGVDVVTPENLDEYLKK 313 >UniRef50_A6VWF2 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Gammaproteobacteria RepID=A6VWF2_MARMS Length = 322 Score = 220 bits (561), Expect = 5e-56, Method: Composition-based stats. Identities = 83/336 (24%), Positives = 145/336 (43%), Gaps = 25/336 (7%) Query: 1 MKIKNI---LLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLER-----WQKDRDIFVKKAE 52 MK KN L+ + T L ++A + KIG+++ W ++ KA+ Sbjct: 1 MKYKNKIMRLIAVFTMLFAFVGTSYAAKYKIGISVPSADHGWTAGLLWWANKAAADLKAK 60 Query: 53 SLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAY 112 + FV A+ + Q+ +E+++ +G+D LVI+P+N L V++EA EGI + Sbjct: 61 EKDIEFFVV-ASSSGSKQVGDVEDLMIKGIDALVILPHNPATLQKVIEEAYDEGIYTVVV 119 Query: 113 DRMINDADIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKV 171 DR + + +I+ DN +G + A+ L + +GN ++ G K V Sbjct: 120 DRELAHPAQNVFIAGDNAGLGRVGAQWLAKEMSGKGNVVVIEGLQ-IPINKQRVDAFNDV 178 Query: 172 LKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALS 231 + Y + IK++ Q D W + AL +MEN L + KIDAV +D G ++A+ Sbjct: 179 IAGYPN---IKILDSQPGD-WSTQKALSVMENFLQKHP-KIDAVWCQDDDMLKGVLKAIE 233 Query: 232 AQGLSGKVAISGQDADLAGIKRIAAGT--QTMTVYKPITLLANTAAEIAVELGNGQEPKA 289 G + + G I+ I +G TV +++A+ +AV ++ Sbjct: 234 ESGRTDIKTVLGGAGSKDIIEMIQSGNKMVRATVTYSPSMIAS-GIALAVHGVKHEKLGY 292 Query: 290 DTTLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFH 325 + +L V K N D KD + Sbjct: 293 LYHEPSR------VILGADLVTKENAADYYFKDAAY 322 >UniRef50_C7QJZ0 Periplasmic binding protein/LacI transcriptional regulator n=5 Tax=Actinomycetales RepID=C7QJZ0_CATAD Length = 371 Score = 220 bits (561), Expect = 6e-56, Method: Composition-based stats. Identities = 68/248 (27%), Positives = 104/248 (41%), Gaps = 11/248 (4%) Query: 28 IGMAID-DLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLV 86 +G + + D +A+SLG K+ ++AN + Q SQIE+MI +G VL+ Sbjct: 84 VGFSQSESTSNPFRSTETDSITNQAKSLGVKLIQRNANADVNAQNSQIEDMIAQGAKVLI 143 Query: 87 IIPYNGQVLSNVVKEAKQEGIKVLAYDRMIND---ADIDFYISFDNEKVGELQAKALVDI 143 + P N L + EAK + I VL DR + +D +I + ++ A L Sbjct: 144 VAPENSDGLGPALAEAKAKKIPVLTIDRTVTGTACSDFIAFIGSNFYGQAQIAADDLATA 203 Query: 144 VP-QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIME 202 Q ++ G+P +N G +K + VV Q + + +M Sbjct: 204 TGSQAKVAILSGTPGNNVTTDRTNGFQDQVKAKY--PNMTVVASQ-TGKFDQTDGQSVMA 260 Query: 203 NALTANNNKIDAVVASNDATAGGAIQALSAQGLS--GKVAISGQDADLAGIKRIAAGTQT 260 L AN I AV A ND A GAIQA++A G + I D ++ +AAGT Sbjct: 261 QMLQANPG-ITAVYAENDEMALGAIQAITAAGKKPGKDIKIVSIDGTQQAVQDVAAGTIY 319 Query: 261 MTVYKPIT 268 V Sbjct: 320 ADVETNPR 327 >UniRef50_A5KK65 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5KK65_9FIRM Length = 343 Score = 220 bits (561), Expect = 7e-56, Method: Composition-based stats. Identities = 71/351 (20%), Positives = 136/351 (38%), Gaps = 39/351 (11%) Query: 1 MKIKNILLTLCTSLL----LTNVAAH----AKEVKIGMAIDDLRLERWQKDRDIFVKKAE 52 MK K +L + L + +V +G+ D + F ++ Sbjct: 1 MKKKKLLAAAIVLCMVIQLLCACGKQKISMSDKVYVGVTCYDQNDTFLSELLVCFKEELN 60 Query: 53 ---SLGAK--VFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGI 107 G + V V++A G++ TQ Q++ +IN G +VL + + S ++ AK+ + Sbjct: 61 HLNKNGVETTVTVKNAAGSQRTQNDQVKELINAGCNVLCVNLVDRADPSEIIDVAKEHDV 120 Query: 108 KVLAYDRMINDADI-----DFYISFDNEKVGELQAKALVDIV-----------PQGNYFL 151 ++ ++R D+ +Y+ D ++ G LQ + V+++ + Y + Sbjct: 121 PIIFFNREPVAEDMRQWDRLYYVGADAKQSGVLQGELAVEMIRQNSQIDHNKDGKIQYVV 180 Query: 152 MGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNK 211 + G +A + + L + +++ + Q W A ME L NK Sbjct: 181 LEGEAGHQDAIIRTENAVDTLNK--NGIELEKLSYQIA-NWNRAQAQNRMEQMLGQYKNK 237 Query: 212 IDAVVASNDATAGGAIQALSAQGLSG--KVAISGQDADLAGIKRIAAGTQTMTVYKPITL 269 I+ V+A+ND A GA+ A + G D G+K + + TVY Sbjct: 238 IELVLANNDDMALGALDAYKNLNYTEALLPVFIGIDGTDMGLKAVEDSSMAGTVYNDKEG 297 Query: 270 LANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTVI 320 A A+++ L G+E + N +P V K N+ + + Sbjct: 298 QARAIAKLSAALVIGKEAEEIKFTNENYIYLPY-----SKVTKENVHEYLK 343 >UniRef50_A4TQ38 Sugar ABC transporter, periplasmic protein n=30 Tax=Proteobacteria RepID=A4TQ38_YERPP Length = 313 Score = 219 bits (560), Expect = 8e-56, Method: Composition-based stats. Identities = 79/322 (24%), Positives = 126/322 (39%), Gaps = 20/322 (6%) Query: 1 MKIKNILLTLCTSLL-LTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVF 59 MK + L +L+ + VA A I + ++ + + KA LG Sbjct: 1 MKNTLLKSCLTAALISMAGVAGAASNGLIAIITPSHDNPFFKAEAEGAKAKATELGYTTL 60 Query: 60 VQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDA 119 V S + + Q IE I R +++ +K+AK GI DR IN+ Sbjct: 61 VASHDDDVNKQNQLIETAIARKAKAIILDNAGSDATIGPLKKAKAAGIPAFLIDREINET 120 Query: 120 DID-FYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVD 177 I I +N + +L A+ V ++ +G Y + G D NA + G V+ + D Sbjct: 121 GIAVSQIVSNNYQGAQLGAEKFVTLMGGKGKYIELLGRESDTNAHVRSQGYHDVIDEHSD 180 Query: 178 SGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSG 237 +K+V Q W A ME+ L AN + I V++ ND A GA AL A G + Sbjct: 181 ---MKMVAQQTA-NWSQTEAFNRMESILQANPD-ITGVISGNDTMALGAEAALKAAGRND 235 Query: 238 KVAISGQDADLAGIKRIA-AGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNG 296 V + G D I G TV +P A A A + + + Sbjct: 236 -VVVVGFDGSDYVRDSIINNGNIKATVLQPGWAQAQMAVVQADQYLKTGKTGLEEK---- 290 Query: 297 LKDVPSRLLTPIDVNKNNIKDT 318 +L+ + +++NN K+ Sbjct: 291 ------QLMDCVLIDENNAKNL 306 >UniRef50_A8S343 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S343_9CLOT Length = 373 Score = 219 bits (560), Expect = 8e-56, Method: Composition-based stats. Identities = 68/327 (20%), Positives = 129/327 (39%), Gaps = 17/327 (5%) Query: 3 IKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQS 62 + + +T + + T+V A + KIG + +++G Q+ Sbjct: 58 VSQLPVTGIGAQIATSVKAGG-DYKIGYIAKNTTNPYMVAQSAGVEAAGKAMGFTAITQA 116 Query: 63 A--NGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD 120 + E Q+ +ENMI + VD +++ + + V++A+ G+ VL + Sbjct: 117 PTTADSVEEQVQLMENMITQDVDAIIVHCADSNGIMTGVRKAQDAGVLVLTIGTPAAEDT 176 Query: 121 IDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSG 179 D + G AKA+ D + +G + ++ G +NA G L Y Sbjct: 177 FLRT-GVDYYESGYTMAKAVADKLGGKGKFIILEGPAGASNAIERLNGINTGLSEY---E 232 Query: 180 KIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKV 239 I++V Q + + + EN + + IDAV+A ND +A GA+QAL+A +S V Sbjct: 233 GIEIVASQTA-NFKRTEGMSVTENLIQQYTD-IDAVIACNDESALGAVQALTAANMSD-V 289 Query: 240 AISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKD 299 + G D + + GT T A AV+ N + + Sbjct: 290 LVCGFDGSVDATNAVKEGTMFATYNTDPYGSGFVACAYAVKYLNDKTEPEGKFIPF---- 345 Query: 300 VPSRLLTPIDVNKNNIKDTVIKDGFHK 326 P+ P+ + + +++ + + K Sbjct: 346 -PTAANDPLVI-ADTVQNYIDNIAWWK 370 >UniRef50_C9LY79 Periplasmic ribose-binding protein n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LY79_9FIRM Length = 342 Score = 219 bits (560), Expect = 8e-56, Method: Composition-based stats. Identities = 57/301 (18%), Positives = 111/301 (36%), Gaps = 18/301 (5%) Query: 14 LLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQ 73 + + +++ +G + + + AE G ++ +A +E Q+ Sbjct: 30 VGSAEPGSGNRKITMGYSQIGAQSTWRAAHTASIKQAAEDAGIELQFSNAELKQENQIRA 89 Query: 74 IENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFY---ISFDNE 130 I + I + VD++ P V+KEAK I V+ DR + D Y I D+ Sbjct: 90 IRSFIAQKVDIIAFSPIVATGWDEVLKEAKAAKIPVIIVDRDLQTNDDSLYIMRIGTDSV 149 Query: 131 KVGELQAKALVDIVPQG-----------NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSG 179 + G + L + + N + G + + G + + Sbjct: 150 REGREAFRWLDGYMQEKGKKPRDGGAKFNIAEIKGPAGSSVVERRDTGFRDAMTASPNKD 209 Query: 180 KIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSG-- 237 +++ Q + + ++M L +KID + A ND A GAI+A+ A GL Sbjct: 210 AYEILVAQNST-FQKDGGKQVMTEMLKNYKDKIDILFAQNDDMALGAIEAIEAAGLKPGQ 268 Query: 238 KVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGL 297 + I D A + + G TV L E+A ++ G++ + + + + Sbjct: 269 DIVIVSCDGTRAIFQAMIDGKSNCTVEGNP-LQGPLLMEMAKKVLAGEKVERTVFVKDSV 327 Query: 298 K 298 Sbjct: 328 Y 328 >UniRef50_P39325 ABC transporter periplasmic-binding protein ytfQ n=141 Tax=Bacteria RepID=YTFQ_ECOLI Length = 318 Score = 219 bits (559), Expect = 9e-56, Method: Composition-based stats. Identities = 68/308 (22%), Positives = 115/308 (37%), Gaps = 14/308 (4%) Query: 3 IKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQS 62 + LL + + A A + +G + + ++ +AE G + + Sbjct: 1 MWKRLLIVSAVSAAMSSMALAAPLTVGFSQVGSESGWRAAETNVAKSEAEKRGITLKIAD 60 Query: 63 ANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADID 122 +E Q+ + + + +GVD + I P V+KEAK I V DR I+ D Sbjct: 61 GQQKQENQIKAVRSFVAQGVDAIFIAPVVATGWEPVLKEAKDAEIPVFLLDRSIDVKDKS 120 Query: 123 FY---ISFDNEKVGELQAKALVDIVPQG--NYFLMGGSPVDNNAKLFRAGQMKVLKPYVD 177 Y ++ DN G+L LV V N + G+ + A + G + +K + Sbjct: 121 LYMTTVTADNILEGKLIGDWLVKEVNGKPCNVVELQGTVGASVAIDRKKGFAEAIK---N 177 Query: 178 SGKIKVVGDQWVDGWLPENALKIMENALTA--NNNKIDAVVASNDATAGGAIQALSAQGL 235 + IK++ Q D + ++ME+ + A N I V A ND GAIQA+ GL Sbjct: 178 APNIKIIRSQSGD-FTRSKGKEVMESFIKAENNGKNICMVYAHNDDMVIGAIQAIKEAGL 236 Query: 236 S--GKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTL 293 + D K + G +V +A A + + TL Sbjct: 237 KPGKDILTGSIDGVPDIYKAMMDGEANASVELTP-NMAGPAFDALEKYKKDGTMPEKLTL 295 Query: 294 NNGLKDVP 301 +P Sbjct: 296 TKSTLYLP 303 >UniRef50_A6VZZ1 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VZZ1_MARMS Length = 294 Score = 219 bits (559), Expect = 9e-56, Method: Composition-based stats. Identities = 62/296 (20%), Positives = 120/296 (40%), Gaps = 13/296 (4%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKE-VKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVF 59 MK + +L + +AK+ + ++ + + + A+ + Sbjct: 1 MKNLKRFTAIAVALASASFNLYAKDEPVVCASLLTQSHPFYIALGNGLKEGAKLQHINLK 60 Query: 60 VQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDA 119 V AN + Q++ IE+ I + VD +VI P + + + +K+A++ I V+ D ++ Sbjct: 61 VSVANQDLAKQINDIEDCITKNVDAIVISPVDSKGIRGPLKKAERANIPVITVDIGAENS 120 Query: 120 DIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDS 178 I +I+ DN G + K V + +G ++ P ++ + G + Sbjct: 121 KIVSHIATDNYGGGVVAGKLAVKQLGGKGQVVMLSY-PGISSVEARLQGFRDAVAD---- 175 Query: 179 GKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGK 238 IK+V Q E ++ N L AN + D + A D GA A++ Q K Sbjct: 176 TDIKIVAVQPGK--TREESMTSTINMLQANPDT-DLIFAFGDDMMIGAGLAVTKQ--KSK 230 Query: 239 VAISGQDADLAGIKRIAAGT-QTMTVYKPITLLANTAAEIAVELGNGQEPKADTTL 293 + G D GIK + V + + TA ++ + NG+E K++ + Sbjct: 231 AVVIGFDGMPEGIKAVDENDHIIGVVKQDADAMGKTAMKVVADYLNGKEVKSEYPI 286 >UniRef50_C6LHP7 ABC transporter periplasmic-binding protein YtfQ n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LHP7_9FIRM Length = 365 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 63/313 (20%), Positives = 125/313 (39%), Gaps = 17/313 (5%) Query: 1 MKIKNILLTLCTSLLLT---NVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKK-AESLGA 56 M K + + CT++ + V+A + IG A + + + +E G Sbjct: 38 MNKKVLGMLACTAVAASMAVGVSAEGDLITIGYAQVGHESDWRTANTKNYEDVFSEENGY 97 Query: 57 KVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI 116 ++ + + + Q+ + N I +G+D +VI P V++EA+ GI V+ DR I Sbjct: 98 ELSLIDCDNDNAKQLEAVRNFITQGMDYIVIAPIQSAGWDTVLQEAQDAGIPVIIADREI 157 Query: 117 NDAD--IDFYISFDNEKVGELQAKALVDIVP--QGNYFLMGGSPVDNNAKLFRAGQMKVL 172 D ++ G L + + + + GS + A G +V+ Sbjct: 158 EADASMYDAWVGTAPYDEGVTAGNWLAEQLDGAEAKILQIEGSVGASAAIGRTDGFAEVM 217 Query: 173 KPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSA 232 + + +++ Q D + + +ME+ + + + VV ND A GA+ A+ A Sbjct: 218 AEHSE---WELLDSQSGD-FTQDGGQAVMESFIKTYEGQFNVVVCQNDNEAYGAMDAMDA 273 Query: 233 QGLS----GKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPK 288 G++ G V + DA G++ G + V A T + ++ G++ + Sbjct: 274 AGITYGVGGDVILISYDATHDGLQYTLDGKINLDVECNPI-QAETVKGVIEQMEAGEDFE 332 Query: 289 ADTTLNNGLKDVP 301 A T + + P Sbjct: 333 ATTLITDEAFCAP 345 >UniRef50_D2Q6W7 D-ribose-binding protein RbsB n=2 Tax=Bifidobacterium dentium RepID=D2Q6W7_9BIFI Length = 327 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 71/335 (21%), Positives = 134/335 (40%), Gaps = 26/335 (7%) Query: 1 MKIKNILLTLCTSLL----LTNVAA------HAKEVKIGMAIDDLRLERWQKDRDIFVKK 50 MK + + L+ A +K +I M W Sbjct: 1 MKKSKYIALAAVAAFTVAPLSACGAGQSNGSESKNYEIAMVAKGFSQSFWVSVHQGADDA 60 Query: 51 AESLGAKVFVQSANGN--EETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIK 108 A GA V + + + Q ++N IN+ D + I P + L+ V+ AK I Sbjct: 61 AAKYGATVTFNGPDNDSQVDKQADMVQNAINKSPDAVAIAPLDEAALTPAVQSAKSASIP 120 Query: 109 VLAYDR--MINDADIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFR 165 + A+D N I + N +VG++ A+ L+ ++ +G Y ++ S D + R Sbjct: 121 LFAFDTAFETNADAITSTVKTSNREVGKVAAENLIALLNGKGKYAVIAHSQTDATSTERR 180 Query: 166 AGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGG 225 G + +K ++ +++VG+ A I L AN + +DA+ A+N+AT G Sbjct: 181 DGFLDYMKK--NAPDMEMVGEVQYSNADQAKAQDIASAILQANPD-LDAIFATNEATVVG 237 Query: 226 AIQALSAQGLSG-KVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNG 284 A + + SG KV + G D+ A + I G + +V + + E AV+ NG Sbjct: 238 AATPVESALKSGHKVLLVGVDSGKAQQQYIRDGVISGSVSQNPYQIGYKTIENAVKSLNG 297 Query: 285 QEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTV 319 ++ + D +++ ++++ + Sbjct: 298 EKIDK-------VIDSGCFWYNADNIDDDDVQQAM 325 >UniRef50_A8RTB0 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RTB0_9CLOT Length = 358 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 57/281 (20%), Positives = 110/281 (39%), Gaps = 12/281 (4%) Query: 26 VKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVL 85 K+G + + D K+AES G + + +A + Q+S +E+++ + +D L Sbjct: 71 FKVGFSELAIDGAWRVAQVDSMQKEAESRGYEFVMSNAELDTAKQISDVEDLLTQDLDFL 130 Query: 86 VIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDA---DIDFYISFDNEKVGELQAKALVD 142 I P + + + ++ AK +G+ + DR N D I + GE A L + Sbjct: 131 FIAPIDMEAIMPAIEAAKAKGVPTILLDREANGTPGVDYICTILSNYIWQGEACADWLSE 190 Query: 143 IVP--QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKI 200 + G ++ + +AG +K Y + +++V Q + W A K+ Sbjct: 191 NGGADSYKIVQITGKVGGSDVRDRQAGFETGVKKYEN---MEIVATQSGE-WSRTEAQKV 246 Query: 201 MENALTANNNKIDAVVASNDATAGGAIQALSAQGLSG--KVAISGQDADLAGIKRIAAGT 258 M+N + + + V ND A G + AL A G++ V + D ++ I AG Sbjct: 247 MQNIIQSTGGDFNVVYCHNDEMALGVVLALKAAGMNPGTDVKVIAIDGQAEAVEAIIAGE 306 Query: 259 QTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKD 299 A + + N ++ + + D Sbjct: 307 MNCIATCNPR-FGPVAFDTMEKYLNEEKLEHIINNEEYIID 346 >UniRef50_C6CXV0 D-galactose/D-glucose ABC transporter, periplasmic D-galactose/D-glucose-binding protein n=15 Tax=Firmicutes RepID=C6CXV0_PAESJ Length = 366 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 67/322 (20%), Positives = 131/322 (40%), Gaps = 24/322 (7%) Query: 15 LLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQI 74 A KE +G+AI R+ ++ + AKV + + ++ TQ ++ Sbjct: 48 TAAESPAVKKEPTVGVAIYKFDDTFMTGVRNAIEAASQGV-AKVDIVDSQNSQPTQNDKV 106 Query: 75 ENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI-----NDADIDFYISFDN 129 + I + + + I + S ++ +AK V+ ++R N D+ +Y+ Sbjct: 107 DLFITKKYNAMAINAVDRTAASMIIDKAKSANTPVVFFNREPLAEDMNKWDLVYYVGAKA 166 Query: 130 EKVGELQAKALVDIV-----------PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDS 178 E+ G + + ++D + Y ++ G P +A+L ++ + Sbjct: 167 EESGTMSGELIIDYWKAHPEMDKNKDGKLQYIMLKGEPGHQDAELRTKYSIQAITDA--G 224 Query: 179 GKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGK 238 ++ + + W A M L+A+ +KI+AV+A+ND A GAI+AL A G Sbjct: 225 IGVEKLAEDTA-MWDRVKAQDKMATFLSAHGDKIEAVLANNDDMALGAIEALKAAGYFKD 283 Query: 239 ---VAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNN 295 + + G DA A ++ ++ GT TV ++A L NG+ P Sbjct: 284 GKFMPVVGVDATAAALQALSEGTLLGTVLNDAKNQGAATLKLAAALANGETPSK-VNTGF 342 Query: 296 GLKDVPSRLLTPIDVNKNNIKD 317 + D + + K+N+ D Sbjct: 343 DITDSKYVWVPYKKITKDNMSD 364 >UniRef50_B1Y1T3 ABC sugar transporter, periplasmic solute-binding protein n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y1T3_LEPCP Length = 355 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 91/342 (26%), Positives = 158/342 (46%), Gaps = 13/342 (3%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESL--GAKV 58 MK + + L T +A A++ + + + +D F+ + AKV Sbjct: 1 MKQHILGALAASILASTATSAMAEDKVFFLLPNATTIRFESRDAPFFIDALKKKAPQAKV 60 Query: 59 FVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIND 118 VQ+A G+ Q +E+ I++G V+V + + + + A + V+ YD Sbjct: 61 IVQNAQGDPSRQQRLVEDAISQGAKVIVYTSADANLSAGSLAAAAAAKVPVVLYDHDAVG 120 Query: 119 ADIDFYISFDNEKVGELQAKALVDIVPQGN-----YFLMGGSPVDNNAKLFRAGQMKVLK 173 D ++ FD+ VG+ Q K +++ + N + G+ + + AGQ + LK Sbjct: 121 GKADAHVVFDSLSVGQAQGKRAAELISKINKPVVKVARIKGNQGEYGTGQYEAGQNEFLK 180 Query: 174 PYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQ 233 P + SGK+KVV +Q+ + W P A E+ LT N +D + ND T GG++ AL +Q Sbjct: 181 PLIASGKVKVVCEQYTENWDPVKAQSFAEDCLTRNKGDVDVFLGMNDGTTGGSVAALISQ 240 Query: 234 GLSG--KVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADT 291 G K+ GQDA + ++ IA G Q +V K + + A AA++ L G+ + Sbjct: 241 GYKPGQKLVTGGQDATVEALRYIAMGWQDNSVLKDLKVEATYAADVVASLLGGKGVPKNL 300 Query: 292 T---LNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 +NN DVP+ L ++ N+ D V+K G ++ Sbjct: 301 INGKVNNKFMDVPAVFLPVSNITAANLSD-VVKAGVWTWPQI 341 >UniRef50_A5ZRB9 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZRB9_9FIRM Length = 333 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 68/327 (20%), Positives = 125/327 (38%), Gaps = 17/327 (5%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFV 60 M + ++ C + + I + ++ F K + L KV + Sbjct: 11 MALVMGIMGQCAIAVNAASKTDDDTLNITLINQGSGQPYIAAYKNCFEKAEKDLNIKVNL 70 Query: 61 QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD 120 + Q + I+N I+ G D +VI P + + V EA GI+V A I D Sbjct: 71 VDGGWDANQQANAIQNAISSGADGIVISPVDPSAVCTYVDEALDAGIEVCALTTQIGTGD 130 Query: 121 I--------DFYISFDNEKVGELQAKALVDIVP-QGNYFLMGGSPVDNNAKLFRAGQMKV 171 + +VG + + G ++ G+P ++ + + G + Sbjct: 131 AEDPVYPETVGLVGHIETEVGRTAMDIAAEALDRSGKIAIIEGTPGMSDTEGRKKGIDEE 190 Query: 172 LKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALS 231 K Y D I+VV + W+ + A M+N + +N +++ V+ +D A GA +AL Sbjct: 191 NKEYPD---IEVV-SRVCGEWVVDKAYTAMQNIIQSNP-EVELVICHSDNMAVGAAKALE 245 Query: 232 AQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADT 291 ++ KV I G + I G T+ A TA E ++ G+ + +T Sbjct: 246 DADMTDKVKIVGIGGSKDALDLIKKGEIYGTIMYVPETEAYTALEATAKVVRGE-AEKET 304 Query: 292 TLNNGLKDVPSRLLTPIDVNKNNIKDT 318 N ++D+P T + N+ Sbjct: 305 FYN--VQDLPLFAETGDVCTQENVDKF 329 >UniRef50_Q2NWM4 Putative xylose ABC transporter periplasmic component n=2 Tax=Enterobacteriaceae RepID=Q2NWM4_SODGM Length = 235 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 176/216 (81%), Positives = 194/216 (89%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFV 60 MK+ N+LLT+C +L A AK++KIGMA+DDLRLERWQKDRDIFV KAE LGA VFV Sbjct: 1 MKLNNLLLTVCAIGVLACQPALAKQLKIGMAVDDLRLERWQKDRDIFVSKAELLGASVFV 60 Query: 61 QSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDAD 120 QSANGNEETQMSQ+ENMIN G+DVLVIIPYNGQVL+NV+ EAKQEGIKV AYDR+IN+AD Sbjct: 61 QSANGNEETQMSQVENMINFGMDVLVIIPYNGQVLTNVIAEAKQEGIKVRAYDRIINNAD 120 Query: 121 IDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGK 180 +DFYISFDNE+VGELQA +LV VPQGNYFLMGGSPVDNNAKLFRAGQM VLKP +DSG+ Sbjct: 121 VDFYISFDNERVGELQANSLVKRVPQGNYFLMGGSPVDNNAKLFRAGQMNVLKPLIDSGR 180 Query: 181 IKVVGDQWVDGWLPENALKIMENALTANNNKIDAVV 216 IKVVGDQW DGWLPENALKIMENALTANNN IDAVV Sbjct: 181 IKVVGDQWADGWLPENALKIMENALTANNNHIDAVV 216 >UniRef50_C0CKL2 Putative uncharacterized protein n=2 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CKL2_9FIRM Length = 348 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 64/357 (17%), Positives = 136/357 (38%), Gaps = 52/357 (14%) Query: 1 MKIK--NILLTLCTSLLLTNVAAH---------------------------AKEVKIGMA 31 MK K IL + LL + IG+A Sbjct: 1 MKKKISLILAIVLAGSLLAGCGSSRTENEGTQEDTAKETENTDSKENTVSEGDSFLIGVA 60 Query: 32 IDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYN 91 + ++ + K + E L ++ VQ A + TQ++QI+ I G D+++++P Sbjct: 61 SPNNKVPYFSKLVEGMTDLQEELNVELDVQDAQDDTNTQINQIQTFIAEGCDLIIMMPVQ 120 Query: 92 GQVLSNVVKEAKQEGIKVLAYDRMIN-------DADIDFYISFDNEKVGELQAKALVDIV 144 + L + E + I ++ DR ++ D+ ++ D+ + G Q + + ++ Sbjct: 121 LESLIPIAMECNEAEIPIMTVDRKLSASDPKDVGVDLITHVGCDDVEGGRKQGELVHQLL 180 Query: 145 PQ-GNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMEN 203 G+ L+ G+ ++ L + G + L ++ I++V Q D A+ + +N Sbjct: 181 GDEGSIALIQGTLGASSQVLRQQGLEEYLSE--NAPGIEIVAAQNSDQ-DQSQAITVTQN 237 Query: 204 ALTAN-NNKIDAVVASNDATAGGAIQALSAQGLSGKV-AISGQDADLAGIKRIAAGTQTM 261 LT +IDA+VA + +A GA+ A+ + + + G D + I A Sbjct: 238 FLTRFAKGEIDAIVAQDPYSALGAVDAIKSASRDELLGTVIGYDLPSEVLDSIKAKDMYG 297 Query: 262 TVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDT 318 + + + ++A + ++ N ++P + N ++ Sbjct: 298 STLQAPYDMGALTLQVAYQCL---TEGSEEIEANTYTEIPVVYI-------ENAREY 344 >UniRef50_Q08VN8 RbsB protein n=2 Tax=Proteobacteria RepID=Q08VN8_STIAU Length = 331 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 62/332 (18%), Positives = 121/332 (36%), Gaps = 39/332 (11%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEV-----------------------KIGMAIDDLRL 37 M+ L L + + + KI + + L Sbjct: 1 MRFLRWLCVLAWASAFMACSDSPRPTVPDVVASVSSRTQREPDAAPNARKIALVMKTLTN 60 Query: 38 ERWQKDRDIFVKKAESLGAKVFVQSA--NGNEETQMSQIENMINRGVDVLVIIPYNGQVL 95 + + + + LG + V++A + E Q+ IE++I D +VI P + L Sbjct: 61 PFFIEMEKGARRAQKELGIDLLVKTAAQETSIEQQIQIIEDLIRMKFDAIVIAPGDSLRL 120 Query: 96 SNVVKEAKQEGIKVLAYDRMINDADIDF-------YISFDNEKVGELQAKALVDIV-PQG 147 V+K A++ GI+++ D ++ + +IS DNEK A + + Sbjct: 121 VPVLKAAQEAGIRIINIDNRLDAEAMKGQGMAPVPFISVDNEKAAYESAGFIAREIHKPA 180 Query: 148 NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTA 207 ++ G +N++ R G + + + I++V + W + + + Sbjct: 181 QAAILEGIRSADNSRQRRVGAERAFRE---NPLIRLVARESA-NWKIDEGRDVTRRLFSD 236 Query: 208 NNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPI 267 + + I + +ND A GAIQ L G G V ++ DA + I +G +TV + Sbjct: 237 HPD-ITLLFCANDMMALGAIQFLQESGRYG-VKVAAYDALEEAKRAILSGRMEVTVNQQA 294 Query: 268 TLLANTAAEIAVELGNGQEPKADTTLNNGLKD 299 +A + NG+ + L Sbjct: 295 AEQGYQGIILASRVLNGEAVPEVVLVETSLVT 326 >UniRef50_A6M1Q7 D-galactose-binding periplasmic protein n=4 Tax=Clostridium RepID=A6M1Q7_CLOB8 Length = 361 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 63/351 (17%), Positives = 136/351 (38%), Gaps = 40/351 (11%) Query: 2 KIKNILLTLCTSLLLTNVAAHAK---------EVKIGMAIDDLRLERWQKDRDIFVKKAE 52 K+ +L + +L++ +A+ K E+KIG+ + + A+ Sbjct: 15 KLSGLLTVVSIFNVLSSCSANVKSANYSNDIKEIKIGVTLYKQDDAFISEISKNIEDIAK 74 Query: 53 S------LGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEG 106 V V A GN Q +Q++ + + DV+ + + S ++ +AK Sbjct: 75 EKENQGKYKIIVNVADAKGNLINQSNQVDKFVAQNYDVICVNMVDRTAASMIIDKAKSAN 134 Query: 107 IKVLAYDRMINDADID-----FYISFDNEKVGELQAKALVDIVPQGN------------Y 149 I ++ ++R + D++ +Y+ D ++ GE+QA +++ + N Y Sbjct: 135 IPIVFFNREPVEEDMERWNKLYYVGADAQQSGEMQANIIINAYKKDNKMVDKNGDGKIQY 194 Query: 150 FLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANN 209 ++ G ++ + +K + + +++ + D W A M + Sbjct: 195 VMLEGEQGHQDSLIRTEYCIKTITQ--NGIELEKLADDTA-NWQSAQATTKMSQWIKNFG 251 Query: 210 NKIDAVVASNDATAGGAIQALSAQGLSG-KVAISGQDADLAGIKRIAAGTQTMTVYKPIT 268 +KI+ V ++ND A GAI A++ + G K + G D ++ + G+ T+ Sbjct: 252 DKIEVVFSNNDEMALGAINAINDANIGGKKPLVVGIDGLPKALEAVKNGSMIGTILNDSK 311 Query: 269 LLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTV 319 AN +A L + + L G +V +N+ + Sbjct: 312 KQANAIFNLAYTLASHGNVNSIEGLEKGK----YIRTPHAEVTSDNVDLYI 358 >UniRef50_C4ZH94 ABC-type sugar transport system, periplasmic component n=2 Tax=Clostridiales RepID=C4ZH94_EUBR3 Length = 325 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 73/334 (21%), Positives = 127/334 (38%), Gaps = 26/334 (7%) Query: 1 MKIKN---ILLTLCTSLLLTNVA-----AHAKEVKIGMAIDDLRLERWQKDRDIFVKKAE 52 MK K + + LC L T A + VKI ++++ + Q D ++A+ Sbjct: 1 MKRKLAYMLSILLCGVFLATGCGSQTTGAGSSNVKILLSVNAIDD-FRQTLVDTAQQEAD 59 Query: 53 SLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAY 112 + G ++ V A N E Q+ I+ G D ++ P + + +A I ++ + Sbjct: 60 ARGVQLDVFDAEDNIENQVEHIKKAAAEGYDAILCGPVSTDTAVEL--KANAGDIPIVFF 117 Query: 113 DRMIN----DADIDFYISFDNEKVGELQAKALVDIV---PQGNYFLMGGSPVDNNAKLFR 165 + N Y+ D G+ QA+ ++D + N + G + Sbjct: 118 NSCPNEKQLSEGQYIYVGSDESVAGQYQAEYVLDKFADRDEINVVIFKGPKGHSATIGRT 177 Query: 166 AGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGG 225 G K L+ KI V + + W + A + M +K D V+ +ND A G Sbjct: 178 KGVKKTLEAS--GKKINYVFEDYA-NWDGDTAGE-MFELFLKTGSKADCVICNNDGMALG 233 Query: 226 AIQALSAQGLS-GKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNG 284 I+A G+ + I G DA G I G TVY+ + A + A +L +G Sbjct: 234 VIEACKNAGIDLNSLPILGVDATADGCTAIENGDMAFTVYQSGSGQGKAAIDAARKLISG 293 Query: 285 QEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDT 318 Q + + D + V+ NN+ Sbjct: 294 QSVQD---IEGAADDGLYVWVPFEKVDSNNVSSY 324 >UniRef50_D2B5R3 Putative sugar ABC transporter, substrate-binding protein n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B5R3_STRRD Length = 378 Score = 217 bits (554), Expect = 4e-55, Method: Composition-based stats. Identities = 113/336 (33%), Positives = 176/336 (52%), Gaps = 21/336 (6%) Query: 10 LCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQK-DRDIFVKKAESL--GAKVFVQSANGN 66 S + A + KIG+ + + R R++K DR + L +V +A + Sbjct: 34 GAASASAGDTGAVDRGFKIGLLLPESRTARYEKFDRPYITEHLAELCPKCQVVYGNAGDD 93 Query: 67 EETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYIS 126 + Q Q + M+N V V+++ P + + ++ V A+ +G+KV+AYDR+ + ID Y S Sbjct: 94 PDRQRQQFDAMLNENVKVIILDPVDARAIAQSVSNARSQGVKVVAYDRLAHGP-IDAYTS 152 Query: 127 FDNEKVGELQAKALVDIV------PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGK 180 FDN +VG +Q +AL+D + +G ++ GSP D NA F+ G +L +G+ Sbjct: 153 FDNIQVGRMQGQALLDALKAGGDPGRGPIVMINGSPSDPNADDFKKGVHSIL-----NGQ 207 Query: 181 IKVVGDQWVDGWLPENALKIMENALTANNN-KIDAVVASNDATAGGAIQALSAQGLSGKV 239 + V + GW PE A A +I V A+ND AGG A+ G+ Sbjct: 208 VIVGREYDTPGWSPERAGTEAAAAFAELGAERIIGVYAANDGMAGGVALAMRNAGVRKGT 267 Query: 240 AISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPK-----ADTTLN 294 ++GQDA+LA I+RI GTQTMTVYKPI A AA++AV+L +G+ + T N Sbjct: 268 PLTGQDAELAAIQRILLGTQTMTVYKPIRPEAVNAAQLAVDLASGKPVTGSGSGSGTVDN 327 Query: 295 NGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL 330 +P++++ P V +NIKDTV+KDGF E+ Sbjct: 328 GTSSSIPAQIIQPTVVTWDNIKDTVVKDGFWTVQEI 363 >UniRef50_Q1ARR7 Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Actinobacteria (class) RepID=Q1ARR7_RUBXD Length = 343 Score = 217 bits (554), Expect = 4e-55, Method: Composition-based stats. Identities = 63/303 (20%), Positives = 135/303 (44%), Gaps = 21/303 (6%) Query: 25 EVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQ----SANGNEETQMSQIENMINR 80 +++ + + + W+ R V A+ +V VQ + + Q++ ++N I + Sbjct: 42 PIELAVVPKAVGFDFWETVRQGAVCAAKRAEGEVDVQWDGVAQETDVTGQVNLLQNFITQ 101 Query: 81 GVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYI-SFDNEKVGELQAKA 139 GVD LV + +VL +V ++A +GI V+ D + + + + DN E + Sbjct: 102 GVDGLVYAATDAKVLHDVTQQALDQGITVVNIDSGTDPQPENVPVFATDNVAAAERATEY 161 Query: 140 LVDIVPQ--GNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENA 197 LV+ + + G + P G VLK + ++K+V +Q + A Sbjct: 162 LVEQLGEDGGKVAFIPFQPGTATNDTRTEGFKNVLKE---NPQVKLVAEQSSES-NYNRA 217 Query: 198 LKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAG 257 L++ E+ LTA+ + +DA+ A+N+ GA +A+ + G +G++ I G D +K + G Sbjct: 218 LQVTEDILTAHPD-LDAIYAANEPGVLGAAEAVRSAGKAGEIIIVGWDTAPDELKAVREG 276 Query: 258 TQTMTVYKPITLLANTAAEIAVELGN-GQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIK 316 + + + + AV++ G++ + D + L+T +++ ++ Sbjct: 277 VVSALIAQNPFRMGYDGVNAAVKMIRTGEQVEGG--------DTGAILVTRENIDDPEVQ 328 Query: 317 DTV 319 + Sbjct: 329 RVL 331 >UniRef50_A9HN30 Periplasmic binding protein/LacI transcriptional regulator n=4 Tax=Alphaproteobacteria RepID=A9HN30_GLUDA Length = 335 Score = 217 bits (553), Expect = 5e-55, Method: Composition-based stats. Identities = 67/306 (21%), Positives = 122/306 (39%), Gaps = 22/306 (7%) Query: 21 AHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESL-GAKVFVQSANGNEETQMSQIENMIN 79 K IG + + + + ++ K+ + N+ TQ+SQ+EN + Sbjct: 45 GPNKSYVIGFSQANFKEPYRAHVDHELQRLVKNYPQFKLVIADGQANDNTQVSQVENFLT 104 Query: 80 RGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKA 139 + VD+L + + L+ V +GI V+ DR ++S DN + Sbjct: 105 QQVDILFVSAFEAAPLTPAVSAVYDKGIPVIELDRRTTGEKFTSFVSGDNRAIAHEAGLY 164 Query: 140 LVDIVPQ-GNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENAL 198 ++P G+ ++ G P + A G + + K+K++ Q VD W+ + A+ Sbjct: 165 AASLLPDGGDVAILEGLPSSSPAIERLEGFKAGIST---NPKVKIIAVQPVD-WMQDKAV 220 Query: 199 KIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADL---AGIKRIA 255 ++ L A+ + I V SND A GA A+ G G+V I G D GI+ +A Sbjct: 221 EVFSAMLQAHPD-IKLVYTSNDLAAAGAYIAVKQAGKLGQVKIIGTDGLPGPSGGIRAVA 279 Query: 256 AGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNI 315 G T T P A A ++A ++ ++ + ++ +N Sbjct: 280 EGQWTATYVYPTG--AAEALDLAKKIL----------IDCASSVPRLVTVPTQRIDASNA 327 Query: 316 KDTVIK 321 K+ K Sbjct: 328 KELYAK 333 >UniRef50_C5V3A4 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V3A4_9PROT Length = 303 Score = 216 bits (552), Expect = 7e-55, Method: Composition-based stats. Identities = 74/321 (23%), Positives = 131/321 (40%), Gaps = 25/321 (7%) Query: 1 MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESL-GAKVF 59 M +L L + L VAA K I A D + + + + Sbjct: 1 MNTIRMLRVLLLAFCLPAVAAENK--VIAFAQDTMANDFRRAQVYEVRDEVARYPQLSFV 58 Query: 60 VQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDA 119 A G + QIE I + VD+LV+ + Q + VV +A Q GI V+ DR IN Sbjct: 59 YSDAQGQTSLLIRQIEQFIEQKVDLLVLGTNDEQAVVPVVTKAYQAGIPVIVLDRGINGK 118 Query: 120 DIDFYISFDNEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDS 178 +I+ DN ++GE+ A+ + + +G L G + +L G + + + Sbjct: 119 QFTSFINSDNIRIGEIGAEYIASRLNGKGLVLLFEGLQKADVTQLRSKGFLTEIGKH--- 175 Query: 179 GKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGK 238 I+V+ + +L ++A+ ME L ++ ++DA+ + +D+ G LS + + Sbjct: 176 SGIRVI--RRTGNYLRKDAVVEMEK-LVSDGIRVDAIFSESDSMLSGVRMVLSKSNIDPR 232 Query: 239 -VAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGL 297 V + G D + I GTQ+ +V P+ A EIA+++ G+ Sbjct: 233 SVVMVGCDYTSEARQAIRDGTQSGSVLFPLG--GKKAVEIALKIFAGESVPKHIYN---- 286 Query: 298 KDVPSRLLTPIDVNKNNIKDT 318 V K+N++ Sbjct: 287 --------PVKLVTKDNVEQV 299 >UniRef50_Q0RYT8 ABC sugar transporter, periplasmic substrate binding protein n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0RYT8_RHOSR Length = 340 Score = 216 bits (552), Expect = 7e-55, Method: Composition-based stats. Identities = 65/299 (21%), Positives = 128/299 (42%), Gaps = 22/299 (7%) Query: 26 VKIGMAID-DLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDV 84 I + D E + K AE FV ++N + Q SQ++ I + VD Sbjct: 42 PTIAFLVPMDRNHEYGRNYVSSLRKAAEEHHVNAFVMNSNYDASVQASQMKIAIAKKVDG 101 Query: 85 LVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI----NDADIDFYISFDNEKVGELQAKAL 140 +VI P ++ +A++ GI V + + + + +++++GELQ K L Sbjct: 102 IVIWPALYGAEQPMLIQAQRAGIPVDISNSQPPEDLDTSLYHAFTGPNDQRIGELQGKEL 161 Query: 141 VDIVP-QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALK 199 ++ +G Y +GG+P + A + G + + + D +K++G Q + A Sbjct: 162 AKLLGSKGTYVYIGGTPGNAAAINRQIGLEREMANHPD---VKLLGSQP-GNFDKNQAQT 217 Query: 200 IMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQ 259 ++ N+IDA+V +D A GA QAL A G++G+V + G + + G+ Sbjct: 218 AASALISRFGNQIDALVTPDDIIASGAAQALDAAGMAGQVKLLGHNYAPVARSLLENGSM 277 Query: 260 TMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDT 318 + T+++ + A +++ G++ P + V K+N+ + Sbjct: 278 STTLFQSPCWDSTHALTTMMDVLAGKDVP------------PVSYMPLPVVTKDNLDEF 324 >UniRef50_C8Q2Z4 Sugar ABC transporter, periplasmic sugar-binding protein n=1 Tax=Pantoea sp. At-9b RepID=C8Q2Z4_9ENTR Length = 308 Score = 216 bits (552), Expect = 7e-55, Method: Composition-based stats. Identities = 70/296 (23%), Positives = 137/296 (46%), Gaps = 21/296 (7%) Query: 26 VKIGMAIDDLRLERWQKDRDIFVKKAESL-GAKVFVQSANGNEETQMSQIENMINRGVDV 84 +++G++I + + R ++ A+ + + G + Q+SQ+++ IN VDV Sbjct: 21 IQVGVSIAQMDDVFLSRLRGYLIEHAKQYPDMTLQFEDGQGAVDKQLSQVQSFINGKVDV 80 Query: 85 LVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIND---ADIDFYISFDNEKVGELQAKALV 141 +++ P + Q N+ A++ + ++ +RM +D D YI D + G LQ L Sbjct: 81 IIVNPVDTQGTKNMSDAARKAKVPLIYLNRMPSDSKMGDGISYIGSDEIEAGRLQMGYLA 140 Query: 142 DIVPQG---NYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENAL 198 D+V N +M G ++ + G +V+ + + + VV + W+ E+ + Sbjct: 141 DMVKDRKNVNIAIMKGLLSNDATRFRTQGAKEVIAKHPN---MHVVMEDTAK-WMREDGM 196 Query: 199 KIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS--GKVAISGQDADLAGIKRIAA 256 +M N + KID + A+ D A GA A+ + GL+ + + G D G++ I + Sbjct: 197 NLMNNWILT-GQKIDILSANADEMAIGAAMAIKSNGLNIGKDILVGGTDGGPNGLQAIKS 255 Query: 257 GTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNK 312 G T+TV++ A A ++A + G+ K +P +L+TP + K Sbjct: 256 GLLTVTVFQDAKSQAFGAIDMAEKAAKGETLKDINF-------IPFQLVTPQNYQK 304 >UniRef50_B4UZK6 D-allose-binding periplasmic protein n=2 Tax=Streptomyces RepID=B4UZK6_9ACTO Length = 322 Score = 216 bits (551), Expect = 8e-55, Method: Composition-based stats. Identities = 64/298 (21%), Positives = 122/298 (40%), Gaps = 24/298 (8%) Query: 25 EVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQS--ANGNEETQMSQIENMINRGV 82 E KI + + W RD + + + G KV VQ+ + + + ++I + +G Sbjct: 19 EAKIAIVTRNFTNPYWAALRDGAIAEGKKQGVKVEVQAGASETDSTGENAKISTLAGQGY 78 Query: 83 DVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIN-------DADIDFYISFDNEKVGEL 135 + ++P N + + Q I +L D I+ +I DN G+ Sbjct: 79 NCFGVVPVNATNVITPLVPVAQRKIPILNLDTQIDANASKQAGVSYASFIGSDNLSAGQQ 138 Query: 136 QAKALVDIVP-QGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLP 194 + L+ ++ +G ++ G + N + G + + GK+ +V Q D + Sbjct: 139 AGEGLLKLMGGKGEVAILQGIAGEQNGINRQKGFTEKVA-----GKLDIVATQPAD-YDQ 192 Query: 195 ENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRI 254 + E L A+ KI + A+ND GA QA+ GL+GKV+I D A ++ + Sbjct: 193 AKGQTVTEAILKAHP-KITGIFAANDTMGLGAAQAVRNAGLTGKVSIISVDGISAALEAV 251 Query: 255 AAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNK 312 AGT + T+ + A + ++L ++ + P L+ +V+K Sbjct: 252 KAGTLSGTISQYPYAEGQLAVQACIDLVAKKKVPSRIVA-------PIALIDSTNVDK 302 >UniRef50_C9Y9X5 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y9X5_9BURK Length = 318 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 71/313 (22%), Positives = 122/313 (38%), Gaps = 15/313 (4%) Query: 3 IKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQS 62 + + ++A E I + E W K + G K + Sbjct: 4 KRMLGRLTIAMATAGLMSAAMAETTIAYITNGNTNEGWTLINGGAKKAGQKAGVKFIELA 63 Query: 63 AN-GNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADI 121 A G Q++ +E+MI R V+ + I P + ++ + +A GIKV+A D I+ A I Sbjct: 64 AEKGELSKQLAIVEDMITRKVNAIAIAPVDSAGIAPAINKALAAGIKVVAVDTGISGAKI 123 Query: 122 DFYISFDNEKVGELQAKALVDIVPQGN-YFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGK 180 Y++ DN K +Q + + G+ + G + + + G + L + K Sbjct: 124 TSYVATDNIKAAMVQGDWTAEQIKDGDTVIYVTGDQGQSTGQERKKGFLDGLNAKRKNVK 183 Query: 181 IKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS-GKV 239 + V W A +E AL AN + + D A GA AL A G G V Sbjct: 184 VVEVATT----WDQTMAQNGVETALRANPTA-KVIACAWDGGALGAKAALMAAGKKAGDV 238 Query: 240 AISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKD 299 I+G D G+ + G Q+ + + + E A+ G++ +A D Sbjct: 239 KIAGFDGSPGGLDMMKQGWQSANAAQMLAKIGQVGVETAIAAAEGKKVEAR-------ID 291 Query: 300 VPSRLLTPIDVNK 312 S L+ P +V++ Sbjct: 292 TGSFLVLPSNVDQ 304 >UniRef50_A0JVZ4 Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Arthrobacter sp. FB24 RepID=A0JVZ4_ARTS2 Length = 318 Score = 216 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 84/312 (26%), Positives = 141/312 (45%), Gaps = 23/312 (7%) Query: 9 TLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEE 68 T + AA + +KIG+ + + +Q++ +S+GA+V Q AN + + Sbjct: 24 IGLTGCATASGAAGDRPMKIGVTVANSTNPFFQQESKTAESYGKSVGAEVLSQVANEDVQ 83 Query: 69 TQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFD 128 TQ +QI+ I GV +VI + + VK A GI V+ D +A ++ I+ D Sbjct: 84 TQSNQIDQFITAGVKFIVIDAADTDGVGPAVKRAVSAGIPVIGVDNQSKNATVN--ITTD 141 Query: 129 NEKVGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQ 187 N++ GE+ ++L D + +G ++ G+P + G +L Y D IK+V DQ Sbjct: 142 NKQAGEISCRSLADKLGGKGKIAILNGTP-VSAVDDRVTGCKGILGQYPD---IKIVADQ 197 Query: 188 WVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDAD 247 + ++AL I + LTAN + +D A ND +A G A +G S V I+ D Sbjct: 198 RGEN-SRDSALPIATDILTANPD-LDGFFAINDPSAVGVQLAAEQKGAS--VVITSVDGA 253 Query: 248 LAGIKRIAA-GTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLT 306 + IAA G T T + L A ++ + + NG+EP L+ Sbjct: 254 SSATDAIAAGGLITATAAQDPAALMRQAIDLGISIVNGKEPDQKVI-----------LVP 302 Query: 307 PIDVNKNNIKDT 318 V+ +N+ Sbjct: 303 TELVDASNVAKY 314 >UniRef50_C2KUT6 Galactoside ABC superfamily ATP binding cassette transporter, binding protein n=3 Tax=Clostridiales RepID=C2KUT6_9FIRM Length = 384 Score = 216 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 70/323 (21%), Positives = 129/323 (39%), Gaps = 38/323 (11%) Query: 20 AAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAK---VFVQSANGNEETQMSQIEN 76 + + K+G+ I R S G K + + ++ TQ +QIEN Sbjct: 73 SGDFSDKKVGVCIYQFSDNFMTLFRTELENYLVSKGFKKENIKIMDGANDQATQTNQIEN 132 Query: 77 MINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADI---------DFYISF 127 I VDVL++ P N + + + + GI ++ +R + + Y+ Sbjct: 133 FITDKVDVLIVNPVNSSSAATITDKVQAAGIPLVYINREPDQDEEKRWEEKNWDVTYVGC 192 Query: 128 DNEKVGELQAKALV-------DIVPQGNY--FLMGGSPVDNNAKLFRAGQMKVLKPYVDS 178 D + G Q + + D+ G ++ G P + +A+ +K L+ Sbjct: 193 DARQSGTFQGEIIASVGMDKLDMNGNGKVDYIMIKGDPENIDAQYRTEFSVKALQDA--G 250 Query: 179 GKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLS-- 236 ++ + +Q V W A ++ NAL N I+ V +ND+ A GA+QA+ A G + Sbjct: 251 MEVNKLDEQ-VGNWDQALAQSLVANALAKNGKDIEVVFCNNDSMALGALQAIQAAGRTVG 309 Query: 237 GKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNG 296 + + G DA + + AGTQT TV+ ++ A + A+ G+ Sbjct: 310 KDIYLVGVDALEEACQNVLAGTQTGTVFNDFLTQSHAAGDAAINYLGGK----------- 358 Query: 297 LKDVPSRLLTPIDVNKNNIKDTV 319 + + V K+N +D + Sbjct: 359 -GNDHYIGCDYVKVTKDNAQDVL 380 >UniRef50_C9Z5F4 Putative lipoprotein n=2 Tax=Streptomyces RepID=C9Z5F4_STRSW Length = 343 Score = 216 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 103/327 (31%), Positives = 167/327 (51%), Gaps = 21/327 (6%) Query: 18 NVAAHAKEVKIGMAIDDLRLERWQK-DRDIFVKKAESL----GAKVFVQSANGNEETQMS 72 ++ +G+ D +R+++ D KK L G +A + ETQ Sbjct: 9 ASPTKGDDITVGVLFPDKDTKRYEQFDYPNIKKKIAELTDNKGIT-KYANAEKDPETQTG 67 Query: 73 QIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKV 132 Q++ M+ VD++++ + + ++ V+ A GI V+AYDR+ ID Y+SFDNE V Sbjct: 68 QMKQMVEDKVDIIIVDAVDSKAIAPAVQSAHDAGIPVIAYDRLAQGP-IDGYVSFDNELV 126 Query: 133 GELQAKALVDIVPQ---GNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWV 189 G++Q ++LV+ + +M GSP D NA +F+ G + L+ K+ + Sbjct: 127 GQVQGRSLVEDLGDSAANKIVMMNGSPTDPNAAMFKEGALSELQD-----KVTISETFDT 181 Query: 190 DGWLPENALKIMENALTANN-NKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADL 248 W P A ME A++ + IDAV A+ND AG I L G++ ++GQDADL Sbjct: 182 KDWDPVVAKANMEKAVSKLGVDNIDAVYAANDGIAGAVIDVLKTAGVAKVPPVTGQDADL 241 Query: 249 AGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPK-----ADTTLNNGLKDVPSR 303 ++RI G Q MTVYK A AAE+AV G+ + D+ + K +P++ Sbjct: 242 DAVQRILTGDQYMTVYKSFPTQAAAAAEMAVAKVQGRSIEFDALAKDSIDSPTTKKIPAQ 301 Query: 304 LLTPIDVNKNNIKDTVIKDGFHKESEL 330 L+ P+ + K+NIKDTV+ DG + ++ Sbjct: 302 LVPPVALTKSNIKDTVVADGIYTVKQI 328 >UniRef50_C0C307 Putative uncharacterized protein n=2 Tax=Clostridium hylemonae DSM 15053 RepID=C0C307_9CLOT Length = 372 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 73/373 (19%), Positives = 132/373 (35%), Gaps = 52/373 (13%) Query: 1 MKIKNILLTLCTSLLLT---NVAAHAKEV--------------KIGMAIDDLRLERWQKD 43 MK + + + LC ++ + A ++ KI + L W Sbjct: 1 MKKRLLSVLLCVAMTASMVIGCGAKEEKKDDSAKTESSDNKDGKIYLLHKGLDYYAWAAM 60 Query: 44 RDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAK 103 ++ F K A L + +A + Q+ Q + ++ + +++ + + L + VKEA Sbjct: 61 QEAFDKYAGDLDCNYEILNAENDVSKQVEQFKTVLTQDPKAIIVTAIDSESLIDCVKEAN 120 Query: 104 QEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVP------QGNYFLMGGSPV 157 GI V YD I DID + DN G+ A+ +VD + +G + G Sbjct: 121 DAGIPVGVYDTPITGGDIDITVDCDNLMAGQQAAEIIVDKLKEKNGEEKGKVLNVFGDLA 180 Query: 158 DNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVA 217 + + G V++ Y + I+ + NAL AN + IDAV A Sbjct: 181 SQVMQERKQGFDNVMEKYPNIEVIE-----ASGKGDRLLSQDAASNALAANED-IDAVHA 234 Query: 218 SNDATAGGAIQALSAQGL------SGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLA 271 D G +A+ + G G + + D + A + RI+ G TV +A Sbjct: 235 PCDNAFYGVYEAVESAGKLKKVGEEGHIIMVSLDGEPAALDRISEGYMDGTVNLDWHAVA 294 Query: 272 NTAAEIAVELG-NGQEPKADTTLNNGLKDV---------------PSRLLTPIDVNKNNI 315 E+ + G++ + P L ++K+N Sbjct: 295 AICLEMMDKYIFEGKDLPDTYEAKDSYFKFAWDSTEIKDATEWKGPWISLPTHKIDKDNA 354 Query: 316 KDTVIKDGFHKES 328 +D G + Sbjct: 355 QDPN-NSGRYSAD 366 >UniRef50_C5EPY8 Ribose ABC transporter n=2 Tax=Clostridiales RepID=C5EPY8_9FIRM Length = 356 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 68/326 (20%), Positives = 132/326 (40%), Gaps = 31/326 (9%) Query: 17 TNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAK-----VFVQSANGNEETQM 71 ++ + + + + FV +AE L A+ ++ ++N + Q+ Sbjct: 40 AAKPSNDGGYVVALCNYSIGNSWRAQMEQEFVAEAEKLKAEGVVSEYYITNSNDDINKQI 99 Query: 72 SQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEK 131 S ++++I + VD +VI + L+ V+EA + GIKV+++D +++ + + D + Sbjct: 100 SDMQDLITKKVDGIVITAASPTALAPAVEEATEAGIKVVSFDNVVDTDEQVATVGIDQTE 159 Query: 132 VGELQAKALVDIV-PQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVD 190 G + A LV + +G ++ G N + G +V K Y D I+++G Sbjct: 160 FGRVCADWLVKKLDGKGKIVVLNGIAGTANDTMRWNGAEEVFKQYPD---IEILGSANA- 215 Query: 191 GWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAG 250 W ME+ L+A +ID V + A GAI A A G V ++ + + Sbjct: 216 SWDYAQGKAAMESMLSAYP-EIDGVWSQGGAMTQGAIDAFIAAGR-KLVPMTSE-GNNGA 272 Query: 251 IKRI---AAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTP 307 ++ + T A ++ +G+E TL D+P Sbjct: 273 LRAWIENRDNGLSCIAPSDPTYSGAEALRTVIKSLDGEEVPKRVTL-----DIP------ 321 Query: 308 IDVNKNNIKDTV---IKDGFHKESEL 330 V ++N+ + D F +EL Sbjct: 322 -VVTEDNVDKYYRQDMPDSFWVFTEL 346 >UniRef50_C7G6I7 D-galactose-binding periplasmic protein n=3 Tax=Clostridiales RepID=C7G6I7_9FIRM Length = 367 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 69/333 (20%), Positives = 132/333 (39%), Gaps = 32/333 (9%) Query: 9 TLCTSLLLTNVAA---HAKEVKIGMAIDDLRLERWQKDRDIFVKKA----ESLGA--KVF 59 L S+++ K +KIG+++ D + F A E G + Sbjct: 33 ILVMSVVIGGCGGREDAKKSIKIGISVYDQYDTFVSEMMKDFNDYATKKEEETGVAINID 92 Query: 60 VQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDA 119 +A+ ++ TQ SQ+ENMI G DV+ + + + ++ A++ I V+ ++R + + Sbjct: 93 TYNASASQSTQNSQVENMITEGCDVICVNLVDRTDPTAIIDLAEKNNIPVIFFNRELVEE 152 Query: 120 DID-----FYISFDNEKVGELQAKALVDIV---------PQG--NYFLMGGSPVDNNAKL 163 D++ +Y+ + G +Q + + G Y ++ G +A + Sbjct: 153 DLERWTRLYYVGAQAFESGIMQGELAAEAFLTDQSLDKNGDGIFQYVVLEGEAGHQDAIV 212 Query: 164 FRAGQMKVLKPYVDSGKIKVVGDQWV-DGWLPENALKIMENALTANNNKIDAVVASNDAT 222 + + ++V + W A M ++ + I+ V+A+ND Sbjct: 213 RTEYSVSTM----IDSGVEVEKLGYAIANWNRAQAQTKMAQLMSQFGDSIELVIANNDDM 268 Query: 223 AGGAIQALSAQGLSGK--VAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVE 280 A GAI AL A GL+ A+ G D G++ + TVY A+ +A E Sbjct: 269 ALGAIDALKASGLTKDEWPAVIGIDGTDVGLEAVKNKEMIGTVYNDKEGQADAMLNLAYE 328 Query: 281 LGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKN 313 L G + ++ +P +T DV+ Sbjct: 329 LSTGSDLSDLNLIDGKYIRLPYARVTCDDVDSY 361 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.313 0.175 0.491 Lambda K H 0.267 0.0537 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,126,503,451 Number of Sequences: 3077464 Number of extensions: 105441116 Number of successful extensions: 332878 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 3811 Number of HSP's successfully gapped in prelim test: 5150 Number of HSP's that attempted gapping in prelim test: 312676 Number of HSP's gapped (non-prelim): 9927 length of query: 330 length of database: 1,040,396,356 effective HSP length: 129 effective length of query: 201 effective length of database: 643,403,500 effective search space: 129324103500 effective search space used: 129324103500 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.5 bits) S2: 94 (40.4 bits)