BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (1756 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P22706 Protein traI n=96 Tax=root RepID=TRAI2_ECOLX 3431 0.0 UniRef50_D2U4N9 Conjugal transfer nickase/helicase (Fragment) n=... 1555 0.0 UniRef50_B6ICH5 TraI protein n=1 Tax=Escherichia coli SE11 RepID... 1290 0.0 UniRef50_D1S139 Protein TraI n=1 Tax=Serratia odorifera 4Rx13 Re... 1069 0.0 UniRef50_C8QEC8 Conjugative transfer relaxase protein TraI n=2 T... 728 0.0 UniRef50_A4WGU6 ATP-dependent exoDNAse (Exonuclease V) alpha sub... 718 0.0 UniRef50_B6ESZ2 Protein TraI (DNA helicase I) n=1 Tax=Aliivibrio... 461 e-127 UniRef50_Q8D674 ATP-dependent exoDNAse, alpha subunit n=14 Tax=V... 459 e-127 UniRef50_B2VB36 TraI protein n=1 Tax=Erwinia tasmaniensis RepID=... 439 e-121 UniRef50_A9L6G5 Conjugative transfer relaxase protein TraI n=7 T... 435 e-120 UniRef50_D1RMM7 Conjugative transfer relaxase protein TraI n=2 T... 429 e-118 UniRef50_D0Z588 IncF plasmid conjugative transfer DNA-nicking an... 427 e-117 UniRef50_C9NPT5 Putative conjugative transfer protein TraI n=1 T... 373 e-101 UniRef50_A9KH87 DNA helicase n=9 Tax=Coxiella burnetii RepID=A9K... 223 4e-56 UniRef50_Q0KJG8 DNA helicase n=3 Tax=Sphingomonadaceae RepID=Q0K... 201 2e-49 UniRef50_Q5WRX6 Putative uncharacterized protein n=1 Tax=Legione... 199 9e-49 UniRef50_Q2NBK6 TrwC protein n=7 Tax=Sphingomonadales RepID=Q2NB... 198 2e-48 UniRef50_Q0HXX9 TrwC protein n=1 Tax=Shewanella sp. MR-7 RepID=Q... 196 6e-48 UniRef50_Q8RTD1 DNA helicase I (Fragment) n=4 Tax=Gammaproteobac... 188 2e-45 UniRef50_B2JAG8 ATP-dependent exoDNAse (Exonuclease V) alpha sub... 187 3e-45 UniRef50_B8GZQ5 DNA relaxase/conjugal transfer nickase-helicase ... 187 5e-45 UniRef50_B0RKM2 Mobilization protein TraI n=3 Tax=Yersinia RepID... 187 5e-45 UniRef50_A5VG54 Conjugative relaxase region-like protein n=2 Tax... 186 6e-45 UniRef50_A4LST4 TrwC protein n=10 Tax=Proteobacteria RepID=A4LST... 186 1e-44 UniRef50_Q3SHW0 TrwC protein n=1 Tax=Thiobacillus denitrificans ... 185 1e-44 UniRef50_Q5ZTT4 TraI n=1 Tax=Legionella pneumophila subsp. pneum... 184 3e-44 UniRef50_Q2NKF7 TrwC protein n=6 Tax=Proteobacteria RepID=Q2NKF7... 182 1e-43 UniRef50_Q1N8W9 TrwC protein n=1 Tax=Sphingomonas sp. SKA58 RepI... 181 2e-43 UniRef50_B4WV74 TrwC relaxase family n=4 Tax=Synechococcus sp. P... 181 2e-43 UniRef50_B1X3A0 Putative TrwC/TraI protein n=2 Tax=Cyanothece Re... 181 3e-43 UniRef50_Q0BRZ0 TraI protein (DNA helicase I) n=1 Tax=Granulibac... 178 2e-42 UniRef50_A0B527 TrwC protein n=3 Tax=Burkholderiales RepID=A0B52... 175 1e-41 UniRef50_B1XRA4 DNA helicase, TrwC and TraI like protein n=1 Tax... 174 4e-41 UniRef50_Q8YK83 Alr8034 protein n=2 Tax=Nostoc RepID=Q8YK83_ANASP 172 8e-41 UniRef50_B2TH74 Conjugative relaxase domain protein n=1 Tax=Burk... 172 9e-41 UniRef50_Q3HKI6 TraI n=2 Tax=Rhodobacteraceae RepID=Q3HKI6_RHOS4 171 2e-40 UniRef50_D0SGZ5 TrwC protein n=1 Tax=Acinetobacter johnsonii SH0... 169 7e-40 UniRef50_Q9X4G2 Mobilization protein TraI n=10 Tax=root RepID=Q9... 168 2e-39 UniRef50_C5ANZ1 TrwC protein n=2 Tax=Burkholderia glumae BGR1 Re... 167 3e-39 UniRef50_UPI00016ACDBF TrwC protein n=1 Tax=Burkholderia thailan... 166 8e-39 UniRef50_A3VN00 TrwC protein n=1 Tax=Parvularcula bermudensis HT... 164 3e-38 UniRef50_B2I3X3 TrwC protein n=1 Tax=Acinetobacter baumannii ACI... 162 9e-38 UniRef50_A8ZPV0 Putative uncharacterized protein n=1 Tax=Acaryoc... 161 2e-37 UniRef50_B1X2J5 Putative TrwC/TraI protein n=1 Tax=Cyanothece sp... 153 6e-35 UniRef50_Q30Q32 ATP-dependent exoDNAse (Exonuclease V) alpha sub... 151 2e-34 UniRef50_B3DCU7 Relaxase n=2 Tax=Burkholderia multivorans ATCC 1... 146 6e-33 UniRef50_B6AM13 Putative uncharacterized protein n=1 Tax=Leptosp... 146 6e-33 UniRef50_C5SIG5 Conjugative relaxase domain protein n=1 Tax=Asti... 144 4e-32 UniRef50_B6ALF3 Putative mobilization protein TraA n=1 Tax=Lepto... 141 2e-31 UniRef50_C7HYW1 Conjugative relaxase domain protein n=1 Tax=Thio... 139 7e-31 UniRef50_A3EUE2 Probable TrwC protein n=2 Tax=Leptospirillum sp.... 137 4e-30 UniRef50_C1F5K2 Conjugative relaxase domain protein n=4 Tax=Acid... 137 4e-30 UniRef50_Q1NH26 Putative uncharacterized protein n=1 Tax=Sphingo... 135 2e-29 UniRef50_B1ZY28 Conjugative relaxase domain protein n=1 Tax=Opit... 134 5e-29 UniRef50_A8ZNG7 Putative uncharacterized protein n=2 Tax=Acaryoc... 133 6e-29 UniRef50_B7KMV0 Conjugative relaxase domain protein n=1 Tax=Cyan... 132 1e-28 UniRef50_C9CRW2 TraI n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9... 130 4e-28 UniRef50_B1ZQ33 Conjugative relaxase domain protein n=2 Tax=Opit... 130 6e-28 UniRef50_UPI00016C3594 TrwC protein n=1 Tax=Gemmata obscuriglobu... 129 7e-28 UniRef50_B8HZ01 Conjugative relaxase domain protein n=1 Tax=Cyan... 129 1e-27 UniRef50_A8ZL36 Putative uncharacterized protein n=2 Tax=Acaryoc... 128 2e-27 UniRef50_A8ZPA5 TrwC protein, putative n=1 Tax=Acaryochloris mar... 127 5e-27 UniRef50_A6Q5N5 Putative uncharacterized protein n=1 Tax=Nitrati... 126 1e-26 UniRef50_O68714 DNA helicase I homolog n=20 Tax=Enterobacteriace... 124 5e-26 UniRef50_D0KZB2 Conjugative relaxase domain protein n=1 Tax=Halo... 120 6e-25 UniRef50_Q21BL3 Putative ATP-dependent exoDNAse (Exonuclease V) ... 120 7e-25 UniRef50_B6ASB0 Conjugal transfer protein, TraA n=6 Tax=Leptospi... 118 2e-24 UniRef50_B5YII1 Putative uncharacterized protein n=1 Tax=Thermod... 115 1e-23 UniRef50_B5JHM8 TrwC relaxase family n=1 Tax=Verrucomicrobiae ba... 114 3e-23 UniRef50_C0A2R1 Conjugative relaxase domain protein n=2 Tax=Opit... 114 5e-23 UniRef50_A9I2Z2 Conjugal transfer protein n=1 Tax=Bordetella pet... 110 5e-22 UniRef50_D2U0N4 Conjugal transfer nickase/helicase TraI (Fragmen... 106 7e-21 UniRef50_UPI00016C4B0F TrwC protein n=1 Tax=Gemmata obscuriglobu... 106 8e-21 UniRef50_C6DZ94 Conjugative relaxase domain protein n=1 Tax=Geob... 106 1e-20 UniRef50_A8ZLG3 Putative uncharacterized protein n=3 Tax=Acaryoc... 105 2e-20 UniRef50_D1N4L7 Conjugative relaxase domain protein n=2 Tax=Vict... 104 3e-20 UniRef50_A3ZVN0 Putative uncharacterized protein n=1 Tax=Blastop... 104 4e-20 UniRef50_B9MIL4 Conjugative relaxase domain protein n=1 Tax=Diap... 101 3e-19 UniRef50_D2QCL6 Conjugative relaxase domain protein n=1 Tax=Spir... 100 5e-19 UniRef50_A4JFK5 ATP-dependent exoDNAse (Exonuclease V) alpha sub... 100 5e-19 UniRef50_C7CNC3 Putative uncharacterized protein n=1 Tax=Methylo... 99 1e-18 UniRef50_Q3SI89 Putative ATP-dependent exoDNAse (Exonuclease V) ... 99 2e-18 UniRef50_C7PJH8 Conjugative relaxase domain protein n=1 Tax=Chit... 98 3e-18 UniRef50_C5A9A9 Putative ATP-dependent exoDNAse (Exonuclease V) ... 94 4e-17 UniRef50_A3ZP08 Putative uncharacterized protein n=1 Tax=Blastop... 92 1e-16 UniRef50_B1MAE8 TraA/ATP-dependent exoDNAse/relaxase n=9 Tax=Myc... 87 7e-15 UniRef50_Q7CW18 Conjugation protein n=8 Tax=Bacteria RepID=Q7CW1... 86 9e-15 UniRef50_A4JHA8 Putative uncharacterized protein n=1 Tax=Burkhol... 85 3e-14 UniRef50_B2FKA4 Putative conjugal transfer protein TraA n=1 Tax=... 83 1e-13 UniRef50_D1BL70 TrwC relaxase n=1 Tax=Veillonella parvula DSM 20... 81 4e-13 UniRef50_B1M9U8 Conjugative relaxase domain protein n=5 Tax=Alph... 79 1e-12 UniRef50_B2I3X4 TrwC protein n=1 Tax=Acinetobacter baumannii ACI... 79 1e-12 UniRef50_Q6SK28 TraA-like protein n=2 Tax=Arthrobacter aurescens... 79 1e-12 UniRef50_A5ESN8 Putative ATP-dependent exoDNAse n=1 Tax=Bradyrhi... 78 3e-12 UniRef50_UPI00016C53CF TrwC protein n=1 Tax=Gemmata obscuriglobu... 78 3e-12 UniRef50_D1ZY95 Whole genome shotgun sequence assembly, contig_3... 77 6e-12 UniRef50_A1RCJ2 Putative TraA-like conjugal transfer protein n=1... 76 1e-11 UniRef50_D0YT16 DNA primase catalytic core n=1 Tax=Mobiluncus mu... 75 2e-11 UniRef50_D2Q9V3 TrwC relaxase n=2 Tax=Bifidobacterium dentium Re... 75 3e-11 UniRef50_B4V4K9 Putative uncharacterized protein n=1 Tax=Strepto... 74 4e-11 UniRef50_Q84GD9 TraA n=5 Tax=Corynebacterium glutamicum RepID=Q8... 74 5e-11 UniRef50_UPI00005104AE conjugative relaxase domain protein, TrwC... 74 8e-11 UniRef50_B5ZL31 TrwC relaxase n=2 Tax=Gluconacetobacter diazotro... 73 1e-10 UniRef50_Q0QW05 Putative uncharacterized protein n=1 Tax=Neisser... 71 3e-10 UniRef50_Q44349 Conjugal transfer protein traA n=12 Tax=Rhizobia... 70 6e-10 UniRef50_A3FG49 ORF16 n=1 Tax=Amycolatopsis benzoatilytica RepID... 70 7e-10 UniRef50_B9K371 Ti-type conjugative transfer relaxase TraA n=2 T... 70 8e-10 UniRef50_C2AVA8 TrwC relaxase n=1 Tax=Tsukamurella paurometabola... 70 8e-10 UniRef50_Q0RC71 Putative uncharacterized protein n=2 Tax=Frankia... 70 1e-09 UniRef50_A5CLM4 Putative conjugal transfer protein, Dtr system n... 69 1e-09 UniRef50_C0E195 Putative uncharacterized protein n=1 Tax=Coryneb... 68 3e-09 UniRef50_B3CU55 Putative conjugative transfer protein TraA n=26 ... 68 3e-09 UniRef50_UPI0001AEF487 conjugal transfer relaxase TraA n=1 Tax=A... 68 4e-09 UniRef50_Q9ETQ3 Conjugal transfer protein n=5 Tax=cellular organ... 67 5e-09 UniRef50_B9QRK8 Ti-type conjugative transfer relaxase TraA, puta... 67 6e-09 UniRef50_C8XHE2 TrwC relaxase n=1 Tax=Nakamurella multipartita D... 67 6e-09 UniRef50_D2S894 TrwC relaxase n=1 Tax=Geodermatophilus obscurus ... 67 7e-09 UniRef50_Q58IS3 Putative uncharacterized protein n=2 Tax=Strepto... 67 7e-09 UniRef50_C7NLP0 TrwC relaxase n=9 Tax=Actinomycetales RepID=C7NL... 67 8e-09 UniRef50_C6RJX0 Putative MobA/MobL protein n=1 Tax=Acinetobacter... 65 2e-08 UniRef50_C5EA62 ATP-dependent exoDNAse n=2 Tax=Bifidobacterium l... 65 2e-08 UniRef50_C3JH47 DNA primase catalytic core domain protein n=1 Ta... 65 2e-08 UniRef50_Q0ZKG3 Putative uncharacterized protein n=1 Tax=Coryneb... 65 2e-08 UniRef50_Q1HG56 TraA n=1 Tax=Rhodococcus erythropolis RepID=Q1HG... 64 4e-08 UniRef50_D1ZVM1 N-terminus not complete (Fragment) n=1 Tax=Sorda... 64 5e-08 UniRef50_A8GX52 Conjugal transfer protein TraA n=53 Tax=cellular... 64 8e-08 UniRef50_C5SL18 Ti-type conjugative transfer relaxase TraA n=2 T... 62 2e-07 UniRef50_C8NSP3 Putative uncharacterized protein n=3 Tax=Coryneb... 62 2e-07 UniRef50_C7M3D6 TrwC relaxase n=1 Tax=Acidimicrobium ferrooxidan... 62 3e-07 UniRef50_B9Z717 Putative uncharacterized protein n=1 Tax=Lutiell... 61 5e-07 UniRef50_B9BFK7 MobA/MobL protein n=1 Tax=Burkholderia multivora... 61 5e-07 UniRef50_D2L9I1 MobA/MobL protein n=1 Tax=Desulfovibrio sp. FW10... 60 6e-07 UniRef50_B7KWK3 Helicase, RecD/TraA family n=16 Tax=Bacteria Rep... 60 6e-07 UniRef50_Q8RMJ7 TraA n=3 Tax=Corynebacterium RepID=Q8RMJ7_CORDI 60 6e-07 UniRef50_C4DRT0 TrwC relaxase n=1 Tax=Stackebrandtia nassauensis... 60 8e-07 UniRef50_Q3B2W0 Helicase RecD/TraA n=19 Tax=Bacteria RepID=Q3B2W... 59 1e-06 UniRef50_Q27I75 PSQ10.13 n=1 Tax=Nocardiopsis sp. 90127 RepID=Q2... 59 1e-06 UniRef50_P55418 Probable conjugal transfer protein traA n=16 Tax... 59 2e-06 UniRef50_C4XNH4 Conjugal transfer protein TraA n=1 Tax=Desulfovi... 59 2e-06 UniRef50_B3GW66 TraA Protein n=3 Tax=Corynebacterium RepID=B3GW6... 59 2e-06 UniRef50_A8QYS1 TraA protein n=1 Tax=Fluoribacter dumoffii RepID... 59 3e-06 UniRef50_A1SIX0 DNA primase catalytic core, N-terminal domain n=... 58 3e-06 UniRef50_C2AI56 TrwC relaxase n=1 Tax=Tsukamurella paurometabola... 58 3e-06 UniRef50_B0P898 Putative uncharacterized protein n=3 Tax=Bacteri... 58 3e-06 UniRef50_B8KYV8 Putative trwC protein n=1 Tax=Stenotrophomonas s... 57 5e-06 UniRef50_A1SH09 DNA primase catalytic core, N-terminal domain n=... 57 6e-06 UniRef50_B9JRK7 Ti-type conjugative transfer relaxase TraA n=9 T... 57 7e-06 UniRef50_Q70K35 Putative TraA protein n=1 Tax=Gordonia westfalic... 57 8e-06 UniRef50_C4WLD2 Ti-type conjugative transfer relaxase TraA n=1 T... 57 9e-06 UniRef50_B7L3A3 Ti-type conjugative transfer relaxase TraA n=2 T... 57 9e-06 UniRef50_C7Q5H7 TrwC relaxase n=1 Tax=Catenulispora acidiphila D... 56 1e-05 UniRef50_C7D7J8 Exodeoxyribonuclease V n=1 Tax=Thalassiobium sp.... 56 1e-05 UniRef50_A5CCM9 Helicase RecD/TraA, ATP-dependent exoDNAse (Exon... 55 2e-05 UniRef50_D0LFJ6 TrwC relaxase n=1 Tax=Gordonia bronchialis DSM 4... 55 2e-05 UniRef50_Q3ZWH7 Atp-dependent exodnase, exonuclease v n=1 Tax=De... 55 2e-05 UniRef50_B5GIK2 Putative uncharacterized protein n=1 Tax=Strepto... 55 3e-05 UniRef50_C7JJ99 Conjugal transfer protein TraA n=10 Tax=Acetobac... 55 4e-05 UniRef50_UPI0001AF46AC exonuclease V subunit alpha n=1 Tax=Mycob... 55 4e-05 UniRef50_Q11MR5 MobA/MobL protein n=32 Tax=Rhizobiales RepID=Q11... 55 4e-05 UniRef50_B3EIT2 Helicase, RecD/TraA family n=13 Tax=Bacteria Rep... 54 5e-05 UniRef50_C7RK95 Helicase, RecD/TraA family n=1 Tax=Candidatus Ac... 54 7e-05 UniRef50_Q6X3G0 TraA n=4 Tax=Gammaproteobacteria RepID=Q6X3G0_PSEAE 53 9e-05 UniRef50_C7IFQ7 AAA ATPase n=1 Tax=Clostridium papyrosolvens DSM... 53 1e-04 UniRef50_A3TJZ6 Transfer protein Tra-like n=1 Tax=Janibacter sp.... 53 1e-04 UniRef50_A8ZLV4 Helicase, RecD/TraA family n=18 Tax=Cyanobacteri... 53 1e-04 UniRef50_A4AC13 Exodeoxyribonuclease V, alpha subunit n=1 Tax=Co... 52 2e-04 UniRef50_Q93UY8 TraA-related protein n=3 Tax=Agrobacterium RepID... 51 3e-04 UniRef50_Q4A5E7 Exodeoxyribonuclease V, alpha subunit n=1 Tax=My... 51 4e-04 UniRef50_Q310C7 ATP-dependent DNA helicase, RecD/TraA family n=4... 51 5e-04 UniRef50_C5B6U1 Conjugal transfer protein TraA n=1 Tax=Methyloba... 50 7e-04 UniRef50_Q131S0 MobA/MobL protein n=37 Tax=cellular organisms Re... 50 7e-04 UniRef50_C6AF24 Conjugal transfer protein TraA n=2 Tax=Bartonell... 50 7e-04 UniRef50_Q6LR56 Putative ATP-dependent exoDNAse (Exonuclease V),... 50 8e-04 UniRef50_A6GES1 Exodeoxyribonuclease V n=1 Tax=Plesiocystis paci... 50 8e-04 UniRef50_C6XTP7 Exonuclease V subunit alpha n=1 Tax=Pedobacter h... 50 9e-04 UniRef50_A8S078 Putative uncharacterized protein n=1 Tax=Clostri... 50 0.001 UniRef50_Q58IP1 Putative uncharacterized protein n=1 Tax=Strepto... 49 0.001 UniRef50_C6MRB9 TrwC protein n=1 Tax=Geobacter sp. M18 RepID=C6M... 49 0.001 UniRef50_Q6MDD6 Putative exodeoxyribonuclease V n=1 Tax=Candidat... 49 0.001 UniRef50_C3QZL9 ATP-dependent exoDNAse n=20 Tax=Bacteroidales Re... 49 0.002 UniRef50_A5IZI9 Exodeoxyribonuclease V alpha chain n=1 Tax=Mycop... 49 0.002 UniRef50_B3E889 Exodeoxyribonuclease V n=2 Tax=Bacteria RepID=B3... 49 0.002 UniRef50_C0CKX9 Putative uncharacterized protein (Fragment) n=1 ... 49 0.002 UniRef50_C5V224 AAA ATPase n=1 Tax=Gallionella ferruginea ES-2 R... 49 0.002 UniRef50_D1R7Z3 Putative uncharacterized protein n=1 Tax=Parachl... 49 0.002 UniRef50_Q6N7J7 Possible Viral (Superfamily 1) RNA helicase n=1 ... 49 0.003 UniRef50_A3ZSA6 Possible Viral (Superfamily 1) RNA helicase n=1 ... 49 0.003 UniRef50_UPI0001C31D3E helicase, RecD/TraA family n=1 Tax=Conexi... 48 0.003 UniRef50_B7J7Z5 Helicase, RecD/TraA family n=1 Tax=Acidithiobaci... 48 0.003 UniRef50_A6P2F0 Putative uncharacterized protein n=1 Tax=Bactero... 48 0.003 UniRef50_B1I2W6 Helicase, RecD/TraA family n=1 Tax=Candidatus De... 48 0.004 UniRef50_Q2S429 Putative deoxyribonuclease n=1 Tax=Salinibacter ... 47 0.005 UniRef50_D1T3Y7 Putative ATP-dependent exoDNAse (Exonuclease V),... 47 0.005 UniRef50_C5V7K0 AAA ATPase n=1 Tax=Gallionella ferruginea ES-2 R... 47 0.005 UniRef50_Q14LX3 Putative exodeoxyribonuclease v alpha subunit pr... 47 0.006 UniRef50_B9NXA5 Putative MobA/MobL protein n=1 Tax=Rhodobacterac... 47 0.006 UniRef50_C5SD04 Helicase, RecD/TraA family n=1 Tax=Allochromatiu... 47 0.007 UniRef50_A6LEW0 ATP-dependent exonuclease V, alpha subunit-helic... 47 0.008 UniRef50_A5ZS54 Putative uncharacterized protein n=2 Tax=Clostri... 47 0.009 UniRef50_D2S7J1 Helicase, RecD/TraA family n=15 Tax=Actinomyceta... 47 0.009 UniRef50_C2E8D7 Exodeoxyribonuclease V alpha chain n=1 Tax=Lacto... 47 0.010 UniRef50_D0LH80 Helicase, RecD/TraA family n=1 Tax=Haliangium oc... 46 0.010 UniRef50_A1SFN3 ATP-dependent exoDNAse (Exonuclease V) alpha sub... 46 0.011 UniRef50_A8L8Y0 TrwC relaxase n=1 Tax=Frankia sp. EAN1pec RepID=... 46 0.011 UniRef50_Q30PF5 ATPase n=2 Tax=Campylobacterales RepID=Q30PF5_SULDN 46 0.011 UniRef50_B4WK60 Putative uncharacterized protein n=2 Tax=Synecho... 46 0.012 UniRef50_C0VHS0 Exonuclease V alpha subunit n=7 Tax=Acinetobacte... 46 0.013 UniRef50_C7XTE9 Exodeoxyribonuclease V, alpha subunit n=1 Tax=La... 46 0.013 UniRef50_A4B916 Exodeoxyribonuclease V, alpha subunit n=1 Tax=Re... 46 0.014 UniRef50_C9CRW1 TraI n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9... 46 0.014 UniRef50_C8NA26 Probable exonuclease V, alpha subunit n=1 Tax=Ca... 46 0.016 UniRef50_Q83YK2 Putative uncharacterized protein n=1 Tax=Bifidob... 46 0.017 UniRef50_A9KS02 Helicase, RecD/TraA family n=32 Tax=Bacteria Rep... 45 0.021 UniRef50_A3ETY4 Exodeoxyribonuclease V, alpha subunit n=2 Tax=Le... 45 0.023 UniRef50_D2SC15 TrwC relaxase n=4 Tax=Geodermatophilus obscurus ... 45 0.031 UniRef50_A5FUD0 ATP-dependent exoDNAse (Exonuclease V) alpha sub... 45 0.035 UniRef50_D2ELG1 RecD/TraA family helicase n=1 Tax=Pediococcus ac... 44 0.043 UniRef50_B0B9E0 Exodeoxyribonuclease V alpha chain n=15 Tax=Chla... 44 0.044 UniRef50_C5V1Z6 Putative uncharacterized protein n=1 Tax=Gallion... 44 0.044 UniRef50_C0QEU8 RecD1 n=2 Tax=Desulfobacterales RepID=C0QEU8_DESAH 44 0.050 UniRef50_A1RCJ6 Toprim domain n=5 Tax=Actinomycetales RepID=A1RC... 44 0.059 UniRef50_Q5HXP7 Conjugal transfer protein TraA n=1 Tax=Gluconoba... 44 0.070 UniRef50_Q2J7P7 Putative uncharacterized protein n=1 Tax=Frankia... 44 0.075 UniRef50_A6YFT0 Putative TraA n=1 Tax=Arthrobacter sp. Chr15 Rep... 44 0.075 UniRef50_A5N3G4 Predicted exodeoxyribonuclease n=26 Tax=Clostrid... 44 0.086 UniRef50_A0LD23 Helicase, RecD/TraA family n=1 Tax=Magnetococcus... 43 0.090 UniRef50_A0R7T4 ATPase n=1 Tax=Pelobacter propionicus DSM 2379 R... 43 0.096 >UniRef50_P22706 Protein traI n=96 Tax=root RepID=TRAI2_ECOLX Length = 1756 Score = 3431 bits (8897), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1686/1756 (96%), Positives = 1718/1756 (97%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRL 60 M+S + V+SAGSAGNYYTDKDNYYVLGSMGERWAG+GAEQLGLQGSVDKDVFTRLLEGRL Sbjct: 1 MLSFSVVKSAGSAGNYYTDKDNYYVLGSMGERWAGQGAEQLGLQGSVDKDVFTRLLEGRL 60 Query: 61 PDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEAL 120 PDGADLSRMQDGSN+HRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEAL Sbjct: 61 PDGADLSRMQDGSNKHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEAL 120 Query: 121 ASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDKV 180 ASTRVMTDGQSETVLTGNLVMALFNHDTSRDQ+PQLHTH VVANVTQHNGEWKTLSSDKV Sbjct: 121 ASTRVMTDGQSETVLTGNLVMALFNHDTSRDQDPQLHTHVVVANVTQHNGEWKTLSSDKV 180 Query: 181 GKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVEAFSGRSQT 240 GKTGF ENV AN+IAFG++Y+ +L+++VEALGYETEVVGKHGMWEMPGVPVEAFS RSQ Sbjct: 181 GKTGFSENVLANRIAFGKIYQSELRQRVEALGYETEVVGKHGMWEMPGVPVEAFSSRSQA 240 Query: 241 IREAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRAD 300 IREAVGEDASLKSRDVAALDTRKSK HVDPE++MAEWMQTLKETGFDIRAYRDAADQRA+ Sbjct: 241 IREAVGEDASLKSRDVAALDTRKSKHHVDPEVRMAEWMQTLKETGFDIRAYRDAADQRAE 300 Query: 301 LRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAG 360 +RT PGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAG Sbjct: 301 IRTQAPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAG 360 Query: 361 IDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYS 420 IDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYS Sbjct: 361 IDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYS 420 Query: 421 DAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDE 480 DAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQ+N+KQDE Sbjct: 421 DAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQLNLKQDE 480 Query: 481 RLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR 540 RLSGELITGRRQL EGM FT GST IVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR Sbjct: 481 RLSGELITGRRQLQEGMVFTSGSTFIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR 540 Query: 541 TGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQ 600 TGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRY RLAGDFAASVKAGEESVAQ Sbjct: 541 TGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYDRLAGDFAASVKAGEESVAQ 600 Query: 601 VSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWN 660 VSGVREQAILTQAIRSELKTQGVLG PEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWN Sbjct: 601 VSGVREQAILTQAIRSELKTQGVLGHPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWN 660 Query: 661 PETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRV 720 PETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRV Sbjct: 661 PETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRV 720 Query: 721 TGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGH 780 TGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPV+DSPFTALKLENGWVETPGH Sbjct: 721 TGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVADSPFTALKLENGWVETPGH 780 Query: 781 SVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQI 840 SVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQI Sbjct: 781 SVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQI 840 Query: 841 KTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTG 900 K RAGETSLETAIS QK+ LHTPAQQAIHLALPV+ESK LAFSMVDLLTEAKSFAAEGTG Sbjct: 841 KARAGETSLETAISLQKTGLHTPAQQAIHLALPVLESKNLAFSMVDLLTEAKSFAAEGTG 900 Query: 901 FTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMER 960 FTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAV PLMER Sbjct: 901 FTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVTPLMER 960 Query: 961 VPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRV 1020 VPGELME LTSG RAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLP SERPRV Sbjct: 961 VPGELMETLTSGPRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPASERPRV 1020 Query: 1021 VGLGPTHRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDM 1080 VGLGPTHRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDM Sbjct: 1021 VGLGPTHRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDM 1080 Query: 1081 ARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAV 1140 ARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADV IMKEIVRQTPELREAV Sbjct: 1081 ARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVVIMKEIVRQTPELREAV 1140 Query: 1141 YSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEA 1200 YSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGE Sbjct: 1141 YSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGET 1200 Query: 1201 FPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVM 1260 FPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHD REKAGELGKEQVM Sbjct: 1201 FPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDAREKAGELGKEQVM 1260 Query: 1261 VPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLIS 1320 VPVLNTANIRDGELRRLSTWE + DAL LVD+VYHRIAGISKDDGLITL+DAEGNTRLIS Sbjct: 1261 VPVLNTANIRDGELRRLSTWENNPDALALVDSVYHRIAGISKDDGLITLEDAEGNTRLIS 1320 Query: 1321 PREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQT 1380 PREAVAEGVTLYTPD IRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQT Sbjct: 1321 PREAVAEGVTLYTPDKIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQT 1380 Query: 1381 REIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMK 1440 R IRPGQE+AEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMK Sbjct: 1381 RVIRPGQERAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMK 1440 Query: 1441 QHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAV 1500 QHVQVYTDNRQGWTDAINNAVQKGTAHDV EPKPDREVMNA+RLFSTARELRDVAAGRAV Sbjct: 1441 QHVQVYTDNRQGWTDAINNAVQKGTAHDVLEPKPDREVMNAQRLFSTARELRDVAAGRAV 1500 Query: 1501 LRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGE 1560 LRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGE Sbjct: 1501 LRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGE 1560 Query: 1561 GRVKGSGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPGAIT 1620 GRVKGSGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPGAIT Sbjct: 1561 GRVKGSGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPGAIT 1620 Query: 1621 GGRVWGDIPDNSVQPGAGNGEPVTAEVLAQRQAEEAIRRETERRADEIVRKMAENKPDLP 1680 GGRVWGDIPD+SVQPGAGNGEPVTAEVLAQRQAEEAIRRETERRADEIVRKMAENKPDLP Sbjct: 1621 GGRVWGDIPDSSVQPGAGNGEPVTAEVLAQRQAEEAIRRETERRADEIVRKMAENKPDLP 1680 Query: 1681 DGKTEQAVREIAGQERDRAAITEREAALPEGVLREPQRVREAVREIARENLLQERLQQME 1740 DGKTEQAVREIAGQERDRA ITEREAALPE VLRE QR +EAVRE+ARENLLQERLQQ+E Sbjct: 1681 DGKTEQAVREIAGQERDRADITEREAALPESVLRESQREQEAVREVARENLLQERLQQIE 1740 Query: 1741 RDMVRDLQKEKTLGGD 1756 RDMVRDLQKEKTLGGD Sbjct: 1741 RDMVRDLQKEKTLGGD 1756 >UniRef50_D2U4N9 Conjugal transfer nickase/helicase (Fragment) n=1 Tax=Arsenophonus nasoniae RepID=D2U4N9_9ENTR Length = 1601 Score = 1555 bits (4026), Expect = 0.0, Method: Compositional matrix adjust. Identities = 781/1632 (47%), Positives = 1098/1632 (67%), Gaps = 34/1632 (2%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRL 60 MMS +++SA AG+YYT KDNYYVL SM ER+ G+GAE LGL G DK+ F LLEG+L Sbjct: 1 MMSFNRIKSAQGAGDYYTQKDNYYVLESMEERYFGKGAEILGLTGEFDKNTFRELLEGKL 60 Query: 61 PDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEAL 120 PDG +L +DG N+HRPGYDLTFSAPKS+S+MA++ GDKRL++AHN+AV+ A+ Q E Sbjct: 61 PDGTELIFHKDGKNQHRPGYDLTFSAPKSISIMALVAGDKRLLEAHNKAVEVALSQAEKF 120 Query: 121 ASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDKV 180 AS R M++GQ +TVLT NL+ LFNHDTSRD +PQLHTH+VV N TQHN +W+ L+SD V Sbjct: 121 ASARTMSEGQKQTVLTDNLIAVLFNHDTSRDVDPQLHTHSVVINATQHNEKWQALASDTV 180 Query: 181 GKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVEAFSGRSQT 240 GKTGF E + AN+IA G++YR L+EQ E+LGYETE+VGKHG+WE+ VP E FS R+ Sbjct: 181 GKTGFSEMILANKIALGQIYRHALREQTESLGYETEIVGKHGLWELKNVPTEVFSKRTLA 240 Query: 241 IREAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRAD 300 I AVG+DAS K+RD+A LDTR+ K DP+ +W L TGFD Y+ A+ Sbjct: 241 IDNAVGKDASPKARDIATLDTRQKKTQQDPQQLRQQWQAELHSTGFDAEKYQAQAEINR- 299 Query: 301 LRTLTPGPASQDGPD-VQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARA 359 L+ P +S P+ ++ A++QAI+ LS+R+ QFTY+ +LA+ + LP + GVIE+ARA Sbjct: 300 LQAQNPTTSSIIEPEQIETAISQAISQLSDRQTQFTYSQLLAKAINQLPAQPGVIEQARA 359 Query: 360 GIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVT--VHPEKSVPRTA 417 GID+AI +EQLIPLD+EKGLFTS I +LDELS L + I + ++T V P+ + P Sbjct: 360 GIDQAIEKEQLIPLDKEKGLFTSDIQLLDELS---LKQRIKQHQKITHGVSPQVT-PINQ 415 Query: 418 GYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMK 477 S A P++A++SG GGA+ +R+RVAELV + + GR+ ++A D++S+ + Sbjct: 416 NTSPAARQWLFANPNIAVMSGIGGASIRRDRVAELVTLTNQTGRQAVVLAPDQKSRQYLM 475 Query: 478 QDERLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDS 537 E L + R+ + + AF+P ST+IV EKL+LKE ++L D A R N+Q+++ D+ Sbjct: 476 --ETLPESQVVNRQAINQETAFSPNSTLIVQDAEKLTLKEMVSLTDKAIRENLQLVLMDN 533 Query: 538 GQRTGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEES 597 QR GTG+AL ++ +R+ G + I+SEPD+ R +LA D+ ++ G +S Sbjct: 534 QQRKGTGNALSILRQETA-VFRYSGIKPVQTAIVSEPDKTARLKKLAKDYTRTLAQGIDS 592 Query: 598 VAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVME 657 VAQ++G REQ LT IR LKTQG+LG E+++T L P WL ++SR RD YR G VME Sbjct: 593 VAQITGNREQKNLTGYIREALKTQGLLGKNEMSITTLKPQWLTAKSRISRDSYREGWVME 652 Query: 658 QWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGER 717 W+ E +S +R++IDRVTA S++LTL + GE ++ +I+ L+S WSL++P K+ +++GER Sbjct: 653 YWDSEKKSKERFIIDRVTAVSNTLTLINQHGEQRLEKITQLNSHWSLYQPAKIAISEGER 712 Query: 718 LRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVET 777 LR+ + ++ GDRLQ E MT+ + T+ ++ F+ALK+E +V+ Sbjct: 713 LRLLAREGKGKLKTGDRLQATRHKEGEMTLTHDNTQKTLTVKANNDVFSALKIEQDYVQP 772 Query: 778 PGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVS 837 G S+SD A VFA+VTQ ++ TLN LARSG + LYS+LD +TA+KLA++P + Sbjct: 773 LGGSISDKARVFAAVTQRDLNQETLNQLARSGEKLVLYSALDVQKTAQKLAKNPHYQTTI 832 Query: 838 EQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAE 897 EQ+ +GE +L+ AI QKS L TPAQQAI LA+P +E K + F+ LL A + + Sbjct: 833 EQVNALSGEQNLDKAIEKQKSRLFTPAQQAISLAMPQLEQKNITFTQAQLLATAMNAGEK 892 Query: 898 GTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPL 957 + EI+AQIK L+ + V +G+GT LL+++AS+E EK I++HI EGK A+ PL Sbjct: 893 PLSQQTIEQEIDAQIKNNRLIEMPVVEGFGTNLLINQASFETEKQIIQHIAEGKSALSPL 952 Query: 958 MERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESER 1017 M VP ++ LT GQ+ AT++ILET DRF +QGYAGVGKTTQF+AV+SA++ LP+ ++ Sbjct: 953 MSAVPDSVLNGLTPGQKEATKLILETPDRFIAIQGYAGVGKTTQFKAVLSAIDTLPKDKQ 1012 Query: 1018 PRVVGLGPTHRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGN 1077 P+++GL PTHRAV EM++AGVDA+TLA+FL++ + GE PD+ NTLF++DE++M+GN Sbjct: 1013 PQIIGLAPTHRAVSEMQTAGVDAKTLAAFLYEESQKITQGEKPDYQNTLFVIDEAAMIGN 1072 Query: 1078 TDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELR 1137 TDMA+AY LIAAG GRAV SGD+ QLQ I+PGQPFRLQQ RSA D +MKEIVRQTP+L+ Sbjct: 1073 TDMAKAYHLIAAGNGRAVMSGDSAQLQPISPGQPFRLQQQRSAIDNVVMKEIVRQTPQLK 1132 Query: 1138 EAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLK 1197 A+ +I +++ A+ + + P VPR+E AW P+ S+ E Sbjct: 1133 PAIVQMIAGNIKEAIHTVNQLSPDIVPRKENAWIPDKSIVEMK----------------- 1175 Query: 1198 GEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKE 1257 D P L++AIV D+ GRT EA+E+TLI+T LN DRR +N++IH ++K GEL Sbjct: 1176 -----DNPDNLHQAIVADFIGRTKEAQEKTLIITPLNADRRAINALIHQEKQKGGELQGN 1230 Query: 1258 QVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTR 1317 +V +P+L NI DG+LR ++TW TH+ AL L +N Y +I I + +TL++ +G Sbjct: 1231 EVTLPILVNTNIPDGQLRNINTWATHQQALALKNNQYWQITEIDIKNDTVTLRNEQGQES 1290 Query: 1318 LISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDG 1377 L+SPR+AV EG+TLY +T+ V GD++RFTKSD E+G++ANSVW + A ++TL++G Sbjct: 1291 LLSPRQAVKEGITLYQAETLTVSQGDKIRFTKSDNEQGFLANSVWQIQAADEKTITLTNG 1350 Query: 1378 QQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALS 1437 ++TR + P ++ HIDLAYAIT H +QGASE FAI L T+G K +AYVALS Sbjct: 1351 KKTRTLTPTTDKQHAHIDLAYAITTHASQGASEQFAITLAKTQGKNKAATHPAAAYVALS 1410 Query: 1438 RMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAG 1497 R K HVQVYTDN WT + QK TAHDV E K NA+ LF + L A G Sbjct: 1411 RAKAHVQVYTDNIDDWTALLEKPSQKATAHDVVEQKDITARENAKALFKQGQPLETTAQG 1470 Query: 1498 RAVLRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGF 1557 RA LR + L+ G+S +++ G+KYPQ Y+ P FD+NGK AG+W+ L ++ G Sbjct: 1471 RAALRASHLS-GESMGKWLRMGKKYPQNYLGFPIFDQNGKQAGVWMTRLNNNNPQKPIGN 1529 Query: 1558 SGEGRVKGSGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPG 1617 G+ GS +A+F+A Q S+NG++ LA+ + + V IA ++P G++VR+ G P NP Sbjct: 1530 HTIGKRIGSQEARFLAFQRSQNGKTALANTLTEAVEIANNHPQHGIIVRLEGNDMPHNPK 1589 Query: 1618 AITGGRVWGDIP 1629 AITGG+ W + P Sbjct: 1590 AITGGQQWVNQP 1601 >UniRef50_B6ICH5 TraI protein n=1 Tax=Escherichia coli SE11 RepID=B6ICH5_ECOSE Length = 1738 Score = 1290 bits (3338), Expect = 0.0, Method: Compositional matrix adjust. Identities = 785/1794 (43%), Positives = 1098/1794 (61%), Gaps = 97/1794 (5%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRL 60 M+SIA + AG YYT +DNYY LGSM RW G GA+ L L+G VD L+ GRL Sbjct: 1 MLSIAPI--AGGGAGYYTSQDNYYFLGSMQSRWLGEGAKSLQLEGPVDAFRLDELIAGRL 58 Query: 61 PDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEAL 120 P+G L RM+ G N HR GYDLTFSAPKSVS++ L G+ RL++A N+AV +++VE+L Sbjct: 59 PNGVSLERMEGGINVHRSGYDLTFSAPKSVSVLIALYGENRLLEAWNRAVSETLKEVESL 118 Query: 121 ASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDKV 180 S+RVM +G++ET LT V+A FNHDTSR+ +PQLHTHA+ N+T W+TL+S V Sbjct: 119 VSSRVMKEGETETQLTQKAVIATFNHDTSRNLDPQLHTHALFLNMTPTESGWRTLASGTV 178 Query: 181 GKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVEAFSGRSQT 240 K GFIE VYANQ+A G++ L+ QVEA+GYET GK+G+WE+ GVPV+ FS RSQ Sbjct: 179 RKDGFIEAVYANQLALGQIQLNLLRRQVEAMGYETVDTGKNGLWEIKGVPVDIFSTRSQQ 238 Query: 241 IREAVGEDASLKSRDVAALDTRKSKQ-HVDPEIKMAEWMQTLKETGFDIRAYRDAADQRA 299 IREAVG+DAS+KSR VAALDTR++KQ D E + EW + + TGF RA R+ A +R Sbjct: 239 IREAVGDDASVKSRSVAALDTRRAKQKEPDREELLTEWHERIDRTGFSYRALREKAAERE 298 Query: 300 DLRTLT-----PGPASQDG------------------------PDVQQ-AVTQAIAGLSE 329 L+ T P A G P V + AV+QAI+ LS+ Sbjct: 299 ALQQSTRSVSEPEKAVLSGEAGGYSQREKSSSSTSGQREGVPVPSVMRDAVSQAISLLSD 358 Query: 330 RKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDE 389 R+ QFTY+DVL+RT+ ++ E G I ARAGI++AIS +L+PLD+EKGLFTS IH+LDE Sbjct: 359 RRAQFTYSDVLSRTLALVEAEPGSIALARAGIEQAISSGELVPLDKEKGLFTSSIHLLDE 418 Query: 390 LSVRALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERV 449 LSV+ L++ M++N+V V +P A +VLA P++AI+S G QRE++ Sbjct: 419 LSVQQLAQQAMRENQVMVTMRPEMP----LQGAAAVLADTLPAVAIISTGRGMTTQREQI 474 Query: 450 AELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGSTVIVDQ 509 +V MA QGR+VQ++A DR+ + + + LSG+ ++G + LL G ST+++ Sbjct: 475 QAVVAMAEGQGRQVQVMAPDRKMTAFLAEQQGLSGK-VSG-KNLLTGEGLKHDSTLVIAG 532 Query: 510 GEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMKDAGVNTYRWQGGEQRP-- 567 EKLS+KET+TLLD A R+NVQV++ D G R GTG+AL ++DAGV R QGG R Sbjct: 533 AEKLSVKETVTLLDQALRNNVQVVLMDGGGRQGTGNALATLEDAGV--VRLQGGTDRGVR 590 Query: 568 ATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLP 627 +++S DR RY +LA D+A GE VAQ G REQ LT+AIR LK G LG Sbjct: 591 VSVVSHGDRRQRYEQLALDYAVLHTQGESVVAQAPG-REQRALTEAIRKSLKATGELGDR 649 Query: 628 EVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQ 687 +VT++ L+PV+LDS++R L D YR G ++E+++ E R+ +RY IDRVTA+S +LTL D + Sbjct: 650 DVTISTLTPVFLDSKNRRLTDSYREGQILERYDAERRTSERYTIDRVTARSRTLTLTDEK 709 Query: 688 GETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTV 747 G +Q++++ +DSSW L++P +PVA+GE+L + G LR GD + V +++ +TV Sbjct: 710 GRSQLIKVRDMDSSWRLYQPGMLPVAEGEKLMLLGSHGKLR--SGDSVTVEHITDRTLTV 767 Query: 748 VVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLAR 807 R LPV+D LK+ G+V TPG +VS+ V A+V+ TLN LA Sbjct: 768 RQGERRH--RLPVAD----GLKISQGYVTTPGKTVSEQGVVLAAVSARDTQAQTLNTLAT 821 Query: 808 SGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQA 867 SG V++Y+SL E +LAR P + EQ+ L+TA+ + +L ++A Sbjct: 822 SGDRVQIYTSLSEEDAHARLARSPLYRQAREQVSPEG--KPLDTAMQQARDSLMPVTEKA 879 Query: 868 IHLALPVVESKKLAFSMVDLLTEAKSFAAEGT--GFTELGGEINAQIKRGDLLYVDVAKG 925 + A+ + + + FS D++ EA T G E+ ++RG++L V G Sbjct: 880 VRQAITLAQGSSVVFSRQDVVLEALKAHPSVTPYGIHHTFAEL---VQRGEILSV---PG 933 Query: 926 YGTG-LLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETS 984 G+ VS ++ EK+ILR + EGK PLME V L+ LTSGQ+ A+R+ILE++ Sbjct: 934 DGSASRYVSAETWLQEKAILRTMAEGKSTQRPLMETVDLSLLTGLTSGQQTASRLILEST 993 Query: 985 DRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVDAQTLA 1044 DRF +QGYAGVGKTTQFR+V++A+ LPE++RP VVGL PTHRAV EM+ GV AQT+A Sbjct: 994 DRFVAIQGYAGVGKTTQFRSVLAALETLPEADRPVVVGLAPTHRAVSEMQGVGVKAQTIA 1053 Query: 1045 SFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQ 1104 SFL DT+ +Q+SGE +FS TLFL+DESSMVGN DMA A IAA GGRAV SGD+ QLQ Sbjct: 1054 SFLMDTERRQQSGEQLNFSKTLFLIDESSMVGNRDMADTLARIAAAGGRAVLSGDSLQLQ 1113 Query: 1105 AIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVP 1164 +A G PF L Q RSA DVA+MK+IVRQ+PELR AVY+L+ AL + V P QVP Sbjct: 1114 PVASGAPFTLMQQRSAIDVAVMKDIVRQSPELRPAVYALLEGRTGEALDTIRRVSPEQVP 1173 Query: 1165 RQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAR 1224 R GA+ P SVTE ++E + + + + AIV DYTGRT EAR Sbjct: 1174 RDNGAYVPASSVTEIRQTREQRETQGDR---------------VISAIVDDYTGRTAEAR 1218 Query: 1225 EQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHR 1284 QTLIVT N D +N+ IHD +AG+ G ++ V VL + L+ ++ H Sbjct: 1219 RQTLIVTQTNADAMAINAGIHDRLHEAGKTGGYELPVTVLVREKTQTEALKSVAGLAQHS 1278 Query: 1285 DALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDR 1344 + L++ Y+ I +G++ L+DAEG L+S E+ + +++ IR+ GD Sbjct: 1279 GHIALINQQYYTIHSPDAANGVVMLRDAEGRDHLLSAFESSLRDIAVFSRREIRLSEGDL 1338 Query: 1345 MRFTKSDRERGYVANSVWTVTAVSGD-SVTLSDGQQTREIRPGQEQAEQHIDLAYAITAH 1403 +RFT+ DRE+G +W V V+ + +TL G+ TR I+PG+E ++ H+D YA TAH Sbjct: 1339 VRFTRQDREQGRDTQVLWEVIRVADNGDITLKHGEHTRLIQPGREMSDMHLDYGYAGTAH 1398 Query: 1404 GAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQK 1463 AQGASE F IAL G G R+ +A AYVALSRMKQHVQVYTD+ W ++ + + Sbjct: 1399 RAQGASEAFVIALAGATGARQRLASLSDAYVALSRMKQHVQVYTDDIGKWQASVAASKSR 1458 Query: 1464 GTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPARFIAPGRKYP 1523 TAHDV + + D A+ L+ +AR L A GRA+LR+ GL S ARFI+ RKYP Sbjct: 1459 ETAHDVLDVQQDFRATTAQNLWDSARTLNQNALGRALLRETGLP-DHSEARFISGSRKYP 1517 Query: 1524 QPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGEGRVKGSGDAQFVALQGSRNGESL 1583 P+VA PA+DRNG+ GIWL + D+ ++G +GR G DA V LQ S NG +L Sbjct: 1518 APHVAWPAYDRNGRQQGIWLQEIRMDEEGRMQGLDEQGRWLGRDDAGVVVLQQSHNGVTL 1577 Query: 1584 LADNMQDGVRIARDNPDSGVVVRIAGEGRP-WNPGAITGGRVWGDIPDNSVQPGAGNGEP 1642 A + + +AR +P+SGVV++ P W +T G+ G+ +++ + Sbjct: 1578 TASDPASALALARQHPESGVVLQQDTAPLPGWLLQKLTQGQ--GETTPEAIKT-VQTAQN 1634 Query: 1643 VTAEVLAQRQAEEAIRRETERRADEIVRKMAENKPDLP-DGKTEQAVREIAGQERDRAAI 1701 AE+L+ + +EE R+E E+ E +++ E + LP + +T QA + ++ RAA Sbjct: 1635 TDAELLSLQTSEERARQEAEKAVRETLQQ-DETRNILPAESETLQAAENVVAEQEIRAA- 1692 Query: 1702 TEREAALPEGVLREPQRVREAVREIARENLL--QERLQQMERDMVRDLQKEKTL 1753 +AA E E + + E+A + QE+L+QME+++V D +EKTL Sbjct: 1693 --GQAAARE----EKENAQLLQHEVAALKHINGQEQLRQMEKELVID--REKTL 1738 >UniRef50_D1S139 Protein TraI n=1 Tax=Serratia odorifera 4Rx13 RepID=D1S139_SEROD Length = 1761 Score = 1069 bits (2765), Expect = 0.0, Method: Compositional matrix adjust. Identities = 677/1803 (37%), Positives = 1025/1803 (56%), Gaps = 92/1803 (5%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRL 60 MMS+A V SA +A NYY+++DNYY LGS+ +W G GA++LGL GSV++ FT +L G+L Sbjct: 1 MMSVAPVASAANAANYYSNQDNYYFLGSLQSQWLGEGAKELGLTGSVEQQAFTDVLFGKL 60 Query: 61 PDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEAL 120 P+G L + + + HRPG+DLTFSAPKSVS+M ++GGDK L+ AHN+AV A Q++ L Sbjct: 61 PNGVQLGKEVNNQHVHRPGHDLTFSAPKSVSLMILIGGDKELLQAHNEAVKVAAEQIQNL 120 Query: 121 ASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDKV 180 S R DG + V TG LV A + HDTSR+ +PQ+HTH +VANVT+ +G+WK L++D + Sbjct: 121 VSARDTKDGVTSIVPTGKLVAAAYTHDTSRNLDPQVHTHLIVANVTELDGKWKALATDYI 180 Query: 181 GKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPV---EAFSGR 237 K GFIE V A+Q+ G+LYR LKE+VE LG+ETE+VGKHG+WE+ GVP + FS R Sbjct: 181 HKAGFIETVMAHQVTLGKLYRNALKEKVEKLGHETEIVGKHGLWEIKGVPEPVRDEFSSR 240 Query: 238 SQTIREAVGEDASLKSRDVAALDTRKSKQHVDP-EIKMAE-WMQTLKETGFDIRAYRDAA 295 + I AVG DA+L+SRDVAA DTR +K VDP ++++ E W +K+ GFDI+ Y+ + Sbjct: 241 GKEIETAVGVDATLRSRDVAAKDTRAAK--VDPSKMRLLERWQNQMKDMGFDIQDYKKS- 297 Query: 296 DQRADLRTLTPGPASQDGPDV--QQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGV 353 L+ + S PD+ QQAV A++ LS+ K +FTY+DVL +G EN + Sbjct: 298 -----LKPVDTPDRSSVEPDIDAQQAVRDAVSLLSDNKTRFTYSDVLLTALG--SSENQI 350 Query: 354 -IERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKS 412 RA ID A+ +IPLD+EKG+F S +H+LDELS++ L++D++K ++V ++ Sbjct: 351 KTADIRAAIDGAMQDNLIIPLDKEKGVFASRLHLLDELSIQGLAQDMVKNSQVVAFKDRQ 410 Query: 413 VPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRS 472 P A + + LA++S GGAA RE +A L +++ GR V ++A+ Sbjct: 411 TPLPAELAPIAT------EQLALLSSIGGAAQHRELIAGLATASKDAGRSVMVLASSAEK 464 Query: 473 QMNMKQDERLSGELITGRRQLLE-GMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQ 531 ++K+ E L G ++ + +L+ + TVIV+ E+LSLKETL L+ A + Q Sbjct: 465 SASLKKSEDLQG-IVQNKFSILQPDFSMKAHGTVIVESAEQLSLKETLVLIGHAREKDAQ 523 Query: 532 VLITDSGQRTGTGSALMAMKDAGVNTYRWQG---GEQRPATIISEPDRNVRYARLAGDFA 588 V+ D R +A+ ++ AGV + G Q A +IS D+ RY LA +A Sbjct: 524 VIFVDGAGRKHISNAMAVLESAGVTRHALNTPSPGLQ--AEVISISDKQERYRALADRYA 581 Query: 589 ASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRD 648 E A V G+REQ L AIR L+ G L V + A SPV+LD++SR + Sbjct: 582 ELSGGTEPVTAAVVGMREQRNLNAAIREALQDAGKLDRGGVVIEARSPVFLDTKSRKQPE 641 Query: 649 MYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPE 708 YR G V+E + + D Y IDRV ++ L+L D+ G + V+I +DS W LF Sbjct: 642 NYRAGYVLEH-RKDAKHTDHYRIDRVHRETRMLSLIDSDGVLRNVKIRDMDSDWRLFESR 700 Query: 709 KMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTAL 768 ++ VA+GE+L + + DRL V +SE +T + + LP+ + P L Sbjct: 701 EIAVANGEKLLAIAGDKEIGLKAKDRLTVTQISEKGITAQLGDGKKSVLLPL-ERP---L 756 Query: 769 KLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLA 828 +++G+ PG SV+D+ V A++ + T+N LA+SG +++ + + +KLA Sbjct: 757 YIQHGYAGAPGASVNDNGHVLAALNSRELSGNTVNALAQSGTRAEIFTGEVQDKAEDKLA 816 Query: 829 RHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLL 888 R ++ AG++ L A+ + + Q+A+ + S +AF+ + LL Sbjct: 817 RMSQVNTPLTHVQHMAGKSELPEALQKLNADVWGDVQKAVTYGIEQSMSHSIAFTPMTLL 876 Query: 889 TEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHIL 948 A + + EI+ + K G+L+ V V G V+R++YE EK+I+R + Sbjct: 877 DNA---MGQLNNHQAIAAEIDRREKSGELINVVV---QGKNQYVARSAYEMEKTIVRIVE 930 Query: 949 EGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSA 1008 +GK PL+E+V ++ LT GQ TRM+L T D+F +VQG AGVGKTTQ A A Sbjct: 931 QGKGTQEPLLEQVDPTVLAGLTPGQNQTTRMLLGTKDQFILVQGSAGVGKTTQLTAFQGA 990 Query: 1009 VNMLPESERPRVVGLGPTHRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFL 1068 + L RP++VGL PTH+AV EMR+ G++AQT SF+ + + +GET ++ N +F+ Sbjct: 991 LQTLAPENRPKIVGLAPTHQAVKEMRAVGIEAQTTKSFIVEHDKRVAAGETINYENVVFV 1050 Query: 1069 LDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKE 1128 +DESSMVGN D A AY IA G GR ++ GD +QL ++ G PF+L Q RS DVAIMK+ Sbjct: 1051 IDESSMVGNQDTAEAYQAIAQGSGRGISVGDREQLLSVDSGAPFQLLQERSPIDVAIMKD 1110 Query: 1129 IVRQ-TPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKL 1187 IVRQ P L+ AVY ++ V+ ++ +++V PS VPR A+ P S+ + +A L Sbjct: 1111 IVRQDAPALKAAVYDILENKVDASIEKIKTVSPSVVPRLPDAFVPAGSIEDLKAESDA-L 1169 Query: 1188 AEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDV 1247 +K M E P+ T I+ DYTGRT RE+TLI+TH N DRR +N IHD Sbjct: 1170 KANIEKGMKIDEDKPE--PTAVSRIIADYTGRTAATREKTLIITHTNSDRRSVNEGIHDT 1227 Query: 1248 REKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLI 1307 +K G LG++Q+ +PVL N L ++ ++ + ++L + Y + + K GL+ Sbjct: 1228 LKKKGVLGEKQITIPVLTRVNDDRRALNQVDKFKAGQ--VILEGDRYLDVINVDKSSGLV 1285 Query: 1308 TLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAV 1367 +D G L+SP E + + ++ ++I V GD++RF+KS++ G +AN +TV+ V Sbjct: 1286 WTRDENGRQHLLSPFENSSRDIAIFNRESIAVAVGDKVRFSKSNKNDGQLANETYTVSGV 1345 Query: 1368 SGD-SVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLM 1426 D VTLS T+ I P ++H+D AYA+T +GAQG S + I LEG EG R ++ Sbjct: 1346 KDDGQVTLSGNAGTKTIHPRDRNTDRHVDYAYAVTGYGAQGTSMPYVITLEGAEGARGML 1405 Query: 1427 AGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQK-GTAHDVFEPKPDREVMNAERLF 1485 A S Y+++SR K HVQ+Y+DN W I V++ TAHDV +P+ R A ++ Sbjct: 1406 ATMRSFYISISRAKSHVQIYSDNLDKWIGKIKKPVEELLTAHDVLKPETQRH--QARTIW 1463 Query: 1486 STARELRDVAAGRAVLRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNP 1545 S L A GRA +Q G AR I RKYP+P++A P FD NGK+AGI L P Sbjct: 1464 SMGVPLNKTAIGRAWQKQDGQVNSGLAARVIPQTRKYPEPHLAFPVFDGNGKAAGISLTP 1523 Query: 1546 LTTDDGNGLRGFSGEGRVKGSGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVV 1605 L + +G R+ + +AQ ++ SRNG++LLA + ++ IARD+ SG+V Sbjct: 1524 LHVSQQGKIE--TGTPRLMATDNAQAALIRKSRNGQTLLATSFEEARAIARDDKQSGIVW 1581 Query: 1606 RIAGEGRPWNPGAITGGRVWGDIPD---------NSVQPGAGNGEPVTAEVL-------A 1649 +I + N ++T G + +I + +QP + P+ A A Sbjct: 1582 QIGDKLPSENMVSLTKGTLKQNIETLHHLAATIADQLQPNSPTTSPMPAPAATHDLDPRA 1641 Query: 1650 QRQAEEAIRR--ETERRADEIVRKMAENKPDLPDGKTEQAVREIAGQ---ERDRAAITER 1704 Q+ A E R+ + ++ +E+ +++ KP +P + E+ + ++A + E++ AA R Sbjct: 1642 QQLALEQARQLADAHQKQEELAKQV---KPVIPQPRPEEKLPDLAHEKLMEQNAAASVSR 1698 Query: 1705 -------EAALPEGVLREPQRVR---EAVREIARENLLQERLQQMER---DMVRDLQKEK 1751 + ++ V R Q+ + E VREI + QER ++ R DM R Q+EK Sbjct: 1699 KERSKGTDISIDSAVTRVHQQEKDRSEQVREI-NVSRTQERDRERVRDEPDMQRQHQQEK 1757 Query: 1752 TLG 1754 T G Sbjct: 1758 TRG 1760 >UniRef50_C8QEC8 Conjugative transfer relaxase protein TraI n=2 Tax=Pantoea sp. At-9b RepID=C8QEC8_9ENTR Length = 1938 Score = 728 bits (1880), Expect = 0.0, Method: Compositional matrix adjust. Identities = 501/1360 (36%), Positives = 723/1360 (53%), Gaps = 72/1360 (5%) Query: 277 WMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTY 336 W + + FDI A +R RT PG +V AV AI+ LS+ + +FTY Sbjct: 392 WQRQMDSVDFDIGGVMRDAREREAART-EPGEEPPLPGEVMDAVRTAISVLSDSRTRFTY 450 Query: 337 TDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALS 396 D+L ++ + E RA +D+AIS L PLD +KG+FTS IH+LDELSV++L+ Sbjct: 451 GDLLLTAHQAGEQQHSIPELRRA-LDQAISDNLLAPLDGDKGVFTSHIHLLDELSVQSLA 509 Query: 397 RDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMA 456 DI+K+NRV E + G + AQ P +AI++ R+ V ELV M+ Sbjct: 510 ADIIKENRVANFRE-----SPGMTPEHLKQAQRAP-VAILNAPASVQRLRDTVEELVTMS 563 Query: 457 REQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLK 516 RE GREV ++A+ + + + L L+ R + + P ST+I++ EKL LK Sbjct: 564 RENGREVSVLASGAERALTLGKSALLKDTLLQRSRVTEKTFSLAPQSTLIIEGAEKLGLK 623 Query: 517 ETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMKDAGVNTYRWQG-GEQRPATIISEPD 575 E L L A N Q+L DS R +AL + AGV G A + S D Sbjct: 624 EMLVLTGEAREKNAQLLFLDSAGRQSNTNALSVLASAGVERLSLTAPGPGLEARVFSIQD 683 Query: 576 RNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALS 635 + RY LA F A V+G REQ LT IR L+ G LG V + A + Sbjct: 684 KRDRYRALAERFTDLSGPDNTVTAAVTGAREQQQLTGYIRDALQNAGKLGRDTVQVEART 743 Query: 636 PVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRI 695 PV++ ++ R L YRPGMV+E + + + Y+IDRV + L+L D G V++ Sbjct: 744 PVFITAKERKLPVSYRPGMVLEDRS-DRQEIRHYMIDRVHDDTRMLSLIDGDGVLSRVKL 802 Query: 696 SSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEP 755 S+L + W LF E++ +A GE+L + DRL V ++ A+TV+ G+ +P Sbjct: 803 STLTADWRLFTREQLSIAQGEQLFALAADRSAGLKARDRLTVTALENGALTVMREGQQKP 862 Query: 756 ATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLY 815 + +D P L + +G+V PG ++ TV AS++ + +N LA+SG + ++ Sbjct: 863 LRI-ATDRP---LYVTHGYVSAPGARDNERGTVLASLSSRELSVNMMNALAQSGTEAEIF 918 Query: 816 SSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVV 875 + R EK+ R + ++ +G + A+ + L + A++A+ A V Sbjct: 919 TGEALNRAEEKMMRLRTGRSPVALVRQASGREDVSDALETLNANLLSDAEKAVSRA--VA 976 Query: 876 ESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRA 935 + + ++FS V LL A+ F L EI Q+K GDL+ V V+ G VSRA Sbjct: 977 QMRHVSFSEVKLLEGAEDFL---ENVPALRTEIARQVKAGDLMPVKVS---GEPRFVSRA 1030 Query: 936 SYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAG 995 ++E EK+I+ I GK AV PLM + L+ LT+GQ+AAT +IL++ DRFT VQGYAG Sbjct: 1031 TWEMEKAIIGEIAAGKNAVEPLMATIAPSLLTGLTAGQQAATTLILQSPDRFTAVQGYAG 1090 Query: 996 VGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVDAQTLASFLHDTQLQQR 1055 GKTTQF+AV +A+ LPES RP ++GL PTHRAV EMR G++AQTL SF+ D Q + Sbjct: 1091 TGKTTQFKAVKAAIETLPESGRPLIIGLAPTHRAVKEMRDTGIEAQTLKSFVLDWQQRTA 1150 Query: 1056 SGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQ 1115 +GE + NTLFL+DESSM+GN D A AY IAAG GRAV GD QL++ G PFRL Sbjct: 1151 AGEEVRYGNTLFLIDESSMLGNQDTAAAYRAIAAGDGRAVPVGDVAQLESPESGAPFRLM 1210 Query: 1116 QTRSAADVAIMKEIVRQ-TPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEH 1174 Q RS DVA+MKEIVRQ L+ AVYS+I AL + V P VPR+ G P Sbjct: 1211 QERSPIDVAVMKEIVRQRDANLKSAVYSVIENKAAAALEKINRVSPGTVPREAGEVVPLR 1270 Query: 1175 SVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLN 1234 SVTE P++ IV DY GRT AREQT+IV L+ Sbjct: 1271 SVTETGS-----------------------PVS---NIVADYIGRTKAAREQTMIVVQLH 1304 Query: 1235 EDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVY 1294 EDRR +N IH + ELG++ V VPVL+ + R+ W+ + +VL + Y Sbjct: 1305 EDRRAINEGIHASMVQRKELGEKAVTVPVLDRITGGRHDFNRIGDWKAGQ--VVLANERY 1362 Query: 1295 HRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRER 1354 + G + G + L+D G + SP E A + ++ I + GD +R K+ ++ Sbjct: 1363 LTVTGADRGTGHVLLRDESGRMQYWSPAELNATEIEVFERREIELREGDSVRLNKTQKQA 1422 Query: 1355 GYVANSVWTVTAVSGD-SVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFA 1413 G+ A+ + V + + + L + + I P A++H+D A+A+T +GAQGAS + Sbjct: 1423 GHAAHEQYRVAELRENGEIVLKNRDGEKVIDPKAVTADRHVDYAWAVTGYGAQGASTDYV 1482 Query: 1414 IALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQ-KGTAHDVFEP 1472 IALEGTEG R M+G + Y++ SR K HVQ+YTD + W + + TAHD P Sbjct: 1483 IALEGTEGARANMSGMRAFYISASRAKDHVQIYTDGLKDWLETLQGGKNGPATAHDALSP 1542 Query: 1473 KPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPARFIAPGRKYPQPYVALPAF 1532 +P+R A +++ + L A GRA LR GL G AR I P +KYP ++ALP + Sbjct: 1543 EPER--AQARAIWAMGQPLSKTALGRAFLRGQGLKGAPLTARIIPPTKKYPDAHLALPVY 1600 Query: 1533 DRNGKSAGIWLNPLTTDDGNGLRGFSGEGRVKGSGDAQFVALQGSRNGESLLADNMQDGV 1592 D NGK+AG+ L PLT + G + GE R +G AQ +Q SR+GE ++ ++Q + Sbjct: 1601 DGNGKTAGLTLVPLTAEAG---QPEPGEVRQLITGGAQAAIVQKSRDGEMIIVSDLQQAL 1657 Query: 1593 RIARDNPDSGV------------VVRIAG--EGRPWNPGA 1618 AR+ P +GV ++++AG GR W P A Sbjct: 1658 AAARNKPQAGVLLLTGRHPPSAQLLKVAGGQPGRGWRPDA 1697 Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 145/272 (53%), Positives = 190/272 (69%), Gaps = 4/272 (1%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRL 60 MM+IA V SA A YY+ KDNYY L + +W G GA +LGL+G VD D FT +L G+L Sbjct: 1 MMTIAPVASAADAAGYYSSKDNYYFLDDLQSQWLGEGARELGLEGPVDLDTFTAVLHGKL 60 Query: 61 PDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEAL 120 P+G ++ + GS+ HRPG+DLTFSAPKS+SM+ + GGDKRL+ AH++AV + VE + Sbjct: 61 PNGVEMGKDVQGSHVHRPGHDLTFSAPKSISMLILAGGDKRLLAAHHEAVKETLALVEQM 120 Query: 121 ASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDKV 180 S R DG + TG +V ALF HDTSR+ +PQ+HTHAV+ANVT+ G+WK L++D + Sbjct: 121 VSARDTRDGVTRITATGKMVAALFTHDTSRNLDPQIHTHAVLANVTELEGKWKALATDTI 180 Query: 181 GKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVV-GKHGMWEMPGVP---VEAFSG 236 GFIE +Y Q++FG+LYR LK + EALGYETE GKH +WE+ G +E FS Sbjct: 181 HGAGFIETLYRYQVSFGKLYRTALKGKTEALGYETEFTGGKHELWEVKGFTDAVLEEFSS 240 Query: 237 RSQTIREAVGEDASLKSRDVAALDTRKSKQHV 268 R + I VGE+ASLKSRDVAALDTR+ KQ + Sbjct: 241 RHREISARVGEEASLKSRDVAALDTRRPKQDI 272 >UniRef50_A4WGU6 ATP-dependent exoDNAse (Exonuclease V) alpha subunit-helicase superfamily I member-like protein n=2 Tax=Enterobacteriaceae RepID=A4WGU6_ENT38 Length = 1807 Score = 718 bits (1854), Expect = 0.0, Method: Compositional matrix adjust. Identities = 474/1373 (34%), Positives = 746/1373 (54%), Gaps = 74/1373 (5%) Query: 314 PDVQQAVTQAIAGLSERKVQFTYTDVL---ARTVGILPPENGVIERARAGIDEAISREQL 370 P++ +AV AI+ LS+ K +FT+ +++ A LP N V R ID ++ + Sbjct: 393 PELAEAVRLAISQLSDSKTRFTFGELMLTAAELSDTLPDMNQV----RQAIDVSLKEGMI 448 Query: 371 IPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVT--VHPEKSVPRTAGYSDAVSVLAQ 428 +PLD EKG+FTS IH+LDELS++ALS++ +K V PE+ P A+SV+ + Sbjct: 449 VPLDSEKGVFTSRIHLLDELSIQALSQEHLKSTAVVSFTRPEQYAP------PALSVVEK 502 Query: 429 DRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELIT 488 D +L +++ G AG R+ A+L ++ QGR+VQ++A+ +++++ + L L++ Sbjct: 503 D--ALVLMNAPSGVAGIRDLTAQLTGISLAQGRDVQVLASSAERALSLEKSDALRDRLVS 560 Query: 489 GRRQLLEG-MAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSAL 547 R+ +L G P ST+I++ E+L LKETL LL A + Q++ DS R G+A+ Sbjct: 561 -RQHVLSGDFHLKPQSTLIIEGAERLGLKETLVLLGEARAQDAQLVFLDSAGRQANGNAM 619 Query: 548 MAMKDAGV-NTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVRE 606 ++ AG+ + R + A ++S ++ RY LA +A E A V G RE Sbjct: 620 SVLESAGIARSRRTEPAPGLEAEVVSITNKRDRYEALAIRYADLSGGAENVTAVVVGKRE 679 Query: 607 QAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSH 666 Q LT IR L+ G L V + A PVWLD+++R + YRPGMV+E + + H Sbjct: 680 QTHLTGLIRDALQNAGQLAREGVEIEARQPVWLDTKTRRMSGSYRPGMVLEDRSDKKERH 739 Query: 667 DRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPG 726 YVIDRV + L+L D G ++IS + + W L+ E + VA GERL Sbjct: 740 S-YVIDRVHEDTRMLSLIDGDGVLTRMKISEVTADWRLYNRETLSVATGERLMSVAGDRE 798 Query: 727 LRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSA 786 + DRL+V +SE + V R + + D P L + + +V PG +D+ Sbjct: 799 HNLKAKDRLEVTQISEKGIEV---KRGDDILMLPKDQP---LYVTHAYVSAPGGRDNDAG 852 Query: 787 TVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGE 846 V A++ + T+N LA+SG ++++ D+ R +L R + + +++ +G+ Sbjct: 853 VVLAALNSRDISTQTMNSLAQSGHRAEVFTAEDQDRAEARLQRMKTNASPVQLVRSLSGK 912 Query: 847 TSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGG 906 + A+ ++ T A A+ A + + + + FS + L + A+ + + F ++G Sbjct: 913 EDVSEAVGRLHDSVRTEAGLAVWRA--INDQRHVTFSELTLASAAEKYHPD---FDQIGD 967 Query: 907 EINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELM 966 EI++ +KRGDLL V G LLV+R+++E EK+ILR + EGK PL+++VP ++ Sbjct: 968 EISSMVKRGDLLKVSAG---GEPLLVARSTWEMEKAILRVVDEGKNTQQPLLDQVPSAVL 1024 Query: 967 EKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPT 1026 LT GQ+ AT ++L ++D+FT +QGYAGVGKTTQ +AV++A+ LP RP + GL PT Sbjct: 1025 NGLTGGQKQATSLVLGSTDQFTGIQGYAGVGKTTQMKAVVAALETLPADARPALTGLAPT 1084 Query: 1027 HRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYAL 1086 H+AV EM GV AQT+ SF+ + +GE PD+ + +FL+DESSM GN D A + Sbjct: 1085 HQAVKEMSDVGVRAQTIKSFIVEHDQATAAGEKPDYKSQVFLIDESSMAGNQDTAALFQA 1144 Query: 1087 IAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTP-ELREAVYSLIN 1145 IAAGGGRAV+ GD DQ +A+ G PF+L Q RS DVAIMKEIVRQ +LR AV+ +I+ Sbjct: 1145 IAAGGGRAVSMGDIDQFEAVDSGAPFKLMQERSPMDVAIMKEIVRQKDVQLRGAVHDIID 1204 Query: 1146 RDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVP 1205 ++ AL +E+ +V R+ A P+ + E Sbjct: 1205 NRIDAALKRIEAQPVDRVAREADATPPDSAFHETE------------------------- 1239 Query: 1206 MTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLN 1265 T + IVRD+TGR+PEAR +TLI+T LN DR+ +N+ IH + GELG + VPVL+ Sbjct: 1240 -TPVDDIVRDWTGRSPEARARTLIITQLNADRQSVNAGIHRQLRERGELGNIAITVPVLD 1298 Query: 1266 TANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAV 1325 E + W +V + Y + + ++ +T+++ EG L SPRE + Sbjct: 1299 KITHTRHEFNKTQAWTA--GMVVKRGDRYQDVLAVDRNGNTVTVRNEEGKIGLYSPRELI 1356 Query: 1326 AEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVS--GDSVTLSDGQQTREI 1383 V L+ + I V GD +RFT +DRE+G AN +TV +VS GD + L + I Sbjct: 1357 TGDVQLFKRNQIEVRQGDLLRFTATDREQGQTANQRFTVESVSEKGD-IRLRGEKGMVTI 1415 Query: 1384 RPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHV 1443 P +A+QH+D +A+T +GAQG S + I+LEGTE RK +A + Y++ SR K+HV Sbjct: 1416 NPDSVRAQQHLDYGWAVTGYGAQGTSTDYVISLEGTEEGRKALATRRAFYISASRAKEHV 1475 Query: 1444 QVYTDNRQGWTDAINNAVQK-GTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLR 1502 Q+YTD + WT A+ + TAHD P+ R+ A +++ + + A GRA +R Sbjct: 1476 QIYTDGKADWTKAVTRPERDIKTAHDALHPETQRQ--QARAIWAMGQPVSKTAIGRAWVR 1533 Query: 1503 QAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGEGR 1562 G+ A+ I R++P+P +ALP +D NGKSAG+ L L + L G+ R Sbjct: 1534 HQGMQDTSLTAKIIPATRRFPEPALALPVYDNNGKSAGLALVSLVSSPEGRL--TQGDTR 1591 Query: 1563 VKGSGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPGAITGG 1622 + + A+ LQ S++G + + ++ + + NP GVV + E + +TGG Sbjct: 1592 MVMTERARGAVLQRSQSGHTHVVSDLGAALEAVKANPKDGVVWQTGEESPSSHLIKVTGG 1651 Query: 1623 RVWGDIPDNSVQPGAGNGEPVTAEVLAQRQAEEAIRRETER-RADEIVRKMAE 1674 ++ + V E Q+ E+A+ +TE+ R E +R++AE Sbjct: 1652 ERQDAEERAAINVSRRETDIVLPETEKQK-PEQAMSADTEKAREQEALRRIAE 1703 Score = 313 bits (802), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 150/298 (50%), Positives = 209/298 (70%), Gaps = 7/298 (2%) Query: 2 MSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRLP 61 MS+A V SAG A YY++ DNYY LG++ W G GA+ LGL+GSV D T +LEGRLP Sbjct: 1 MSVAPVASAGGAAGYYSNADNYYFLGNLQSLWLGEGAKALGLEGSVRGDDLTAVLEGRLP 60 Query: 62 DGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEALA 121 DG+ L + +G++ HRPG+DLTFSAPKSVS++ ++GGDK +++AHN AV A VE L Sbjct: 61 DGSRLGKEINGNHVHRPGHDLTFSAPKSVSILGLIGGDKAMVEAHNHAVRVAAGYVEKLI 120 Query: 122 STRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDKVG 181 S R DG + V T +V A F HDTSR+ +PQLHTH ++AN+T+ +G+WK L++D + Sbjct: 121 SARDTKDGVTSIVHTDKMVAAAFTHDTSRNLDPQLHTHLLIANMTEQDGKWKALATDYIH 180 Query: 182 KTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVEA---FSGRS 238 GFIE V Q+ G++YR L++ VEALG+E E VGKHGMWE+ GVP + FS R Sbjct: 181 NAGFIETVMKMQVTLGKIYRSALRQHVEALGHEVEEVGKHGMWEIKGVPEDVRDEFSSRG 240 Query: 239 QTIREAVGEDASLKSRDVAALDTRKSKQHVDPE--IKMAEWMQTLKETGFDIRAYRDA 294 + I+ A+G +A+L+SRDVAA DTR++K VDP M W+ +K+ G+D++AY+++ Sbjct: 241 REIQGAIGAEATLRSRDVAAKDTRQAK--VDPSRLRLMDRWLNQMKDKGYDLKAYQES 296 >UniRef50_B6ESZ2 Protein TraI (DNA helicase I) n=1 Tax=Aliivibrio salmonicida LFI1238 RepID=B6ESZ2_ALISL Length = 1936 Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust. Identities = 416/1554 (26%), Positives = 730/1554 (46%), Gaps = 175/1554 (11%) Query: 1 MMSIAQVRSAGSAGNYYTDKD-----------------------NYYVLGSMGERWAGRG 37 M+SI+ + SAG A YY D + NYY+ S W G+ Sbjct: 1 MISISPIASAGEATKYYLDDEKHLNGEQSELTTEKENSESDKEKNYYLKDSNNTAWFGKL 60 Query: 38 AEQLGLQGS-VDKDVFTRLLEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAML 96 A + GL G ++ D +L G L D + ++HR G+DLTFSAPKSVS++A++ Sbjct: 61 ATEKGLDGKPIEGDTLQAVLSGSLLDET----IHGKRDKHRAGFDLTFSAPKSVSVLALV 116 Query: 97 GGDKRLIDAHNQAVDFAVRQVEALASTRVMTDGQSETVLTGN---LVMALFNHDTSRDQE 153 GGD RL+D HN AV FA+ ++E A+ T+ ++ N ++ L H TSR+ + Sbjct: 117 GGDTRLLDGHNNAVKFALSELEKDAAQVKYTEEDTKKQSYANSKSMLFGLVQHKTSREDD 176 Query: 154 PQLHTHAVVANVTQ-HNGEWKTLSSDKVGKTGFI----ENVYANQIAFGRLYREKLKEQV 208 PQLHTHA+ AN+T+ G + L++ G I E VY NQ+ +G LY+ L +Q Sbjct: 177 PQLHTHALTANMTRDEQGRLRALATSLKQSGGVINGTMERVYNNQLYYGMLYQSHLSKQA 236 Query: 209 EALGYETEVVGKHGMWEMPGVP---VEAFSGRSQTIREAVGE--DASLKSRDVAALDTRK 263 E+LGY + G +G +E+ GVP ++ FS RSQ I E + S ++RD+AA +TRK Sbjct: 237 ESLGYTIKGAG-NGQFEIEGVPQSLMDDFSKRSQQINEKTQDLGFNSQQTRDLAAKNTRK 295 Query: 264 SKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDG---PDVQQAV 320 +K H D + W T+K GFDI A+ + A + P A + P A+ Sbjct: 296 AKTHKDAVELNSTWQHTVKTDGFDITAFINNAKEN-------PVKAPNENVIKPRAVDAL 348 Query: 321 TQAIAGLSERKVQFTYTDVLARTVGILPP-ENGVIERARAGIDEAISREQLIPLDREKGL 379 T+ I LS+ + Q +Y +++ + E + +DE I+ ++LI LD+ Sbjct: 349 TRTINHLSKTQTQLSYEKMVSFAMSEFTKGEKLDALDIKLALDERIASKELIGLDKNNSQ 408 Query: 380 FTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVP---RTAGYSDAVSVLAQDRPS---- 432 FT+ ++ + ++ K P RT A+S L ++ + Sbjct: 409 FTTTA--------------LLNNEKKLINSTKGRPRHMRTQPNDTALSQLNLNKENQNKL 454 Query: 433 --LAIVSGQGGAA---GQRERVAE-LVMMAREQGREVQIIA----ADRRSQMNMKQDER- 481 L + + Q G E+VA+ L+ + E G+ + I+ + +++ +K+ Sbjct: 455 AELFLSTKQFNTVNVFGSSEQVAKGLLHVGSESGKRIHIMTQGGISQEKTERTIKRQSHT 514 Query: 482 --------LSGELITGRRQLLEGMAFTPGST----VIVDQGEKLSLKETLTLLDGAARHN 529 + + G Q L G TP S V D G K S + + + + A N Sbjct: 515 PLQWIKNTFRADFVHGVNQYL-GDKVTPFSNKDVFVFEDSG-KFSGDQLIDITNKAKHTN 572 Query: 530 VQVL-ITDSGQRTGTGS-ALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDF 587 +++ + + R G S + M + G Q I D N+ L + Sbjct: 573 SKIIFLNHASARQGMKSHSSMDLLSKGNTNNINWVNNQPTKAKIKIHDNNLN--ELVNQY 630 Query: 588 AASVKAGEESVAQVSGVREQAI--LTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRY 645 A + +++ QV + L AIR LK G + V+++ L+P +L R Sbjct: 631 A---EKPDKNTIQVLATTNADVKTLNTAIRERLKQTGEVSRQGVSISTLNPHFLSQEQRT 687 Query: 646 LRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLF 705 L Y+PGMV+ W+ S +Y++ + ++++L + D +G + S ++S+F Sbjct: 688 LSTHYKPGMVLRSWSEGAMS--QYIVSKPHRKTNTLDIIDEKGNQLTIDPSKPAHNFSVF 745 Query: 706 RPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVV-VPGRAEP-ATLPVSDS 763 + E + +A G+++ +GK +++ V + ++T+ G+ + T ++D+ Sbjct: 746 KKESLEIASGDKIITSGKHYASQLAAHQAFIVKKATPQSITLEDREGQQKTIKTKHLTDA 805 Query: 764 PFTALKLENGWVETPGHSVSDSATVFASVTQ-MAMDNATLNGLARSGRDVRLYSSLDETR 822 P T + + T +SD+AT T+ + LN L+ + ++ +++ D+ + Sbjct: 806 PIT-----HNFASTT-QKISDTATHLMVQTKAYSASKELLNELSLNRNNIDIFTD-DKEK 858 Query: 823 TAEKLARHPSFTVVSEQI--KTRAGETSLETAISHQKSA--------LHTPA----QQAI 868 A + ++ E++ T+ E L T ++ + L+TP ++A+ Sbjct: 859 VAAQFEKNEVRPAAIERVMATTQPTEKYLSTLTTNTVTKDVEQALRLLNTPTSNNIEKAV 918 Query: 869 HLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGE--INAQIKRGDLLYVDVAKGY 926 + A+ + K+ ++ +L+ +A ++ E TG T + E I+ + L + + G Sbjct: 919 NFAIHHISEKEAGYTQKELVMQAIRYSLEETG-TAISKEDIIDTLKNNQETLSSEFSDG- 976 Query: 927 GTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPG-ELME---KLTSGQRAATRMILE 982 ++ + EK+IL + GK P + E ++ +LT GQ+ + MI Sbjct: 977 --TRWTTKDAIHTEKTILDTLARGKNQTTPFVTHAQATEFLQHESRLTQGQKESVHMIAT 1034 Query: 983 TSDRFTVVQGYAGVGKTTQFRA---VMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVD 1039 T DRF VQG AG GK+T ++ +++ L E ++GL PTH AV E+++ GV+ Sbjct: 1035 TPDRFVAVQGLAGTGKSTMLEKDIELIHSIDKLSNKE-TTILGLAPTHAAVNELKNKGVE 1093 Query: 1040 AQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGD 1099 AQTL S L D Q + + T + TLFLLDESSM+GN DM AL+ +AV GD Sbjct: 1094 AQTLQSLLADIQSGKTTANT--YQQTLFLLDESSMIGNNDMKHFTALVEKSDAKAVLLGD 1151 Query: 1100 TDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPE-LREAVYSLINRDVERALSGLESV 1158 QLQ+++ G+PF L + +A + M +IVRQ + L AV++++++ E +LS L+ Sbjct: 1152 KAQLQSLSAGKPFELAMSSNALNRTDMTDIVRQQNDTLLGAVHNMVDKQPESSLSKLK-- 1209 Query: 1159 KPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTG 1218 Q P + H V E Q+ A K L + +DY Sbjct: 1210 ---QQPNADTGIHKTHHVVSTYEKITPNHRENQEIATEK----------LAHVVAQDYLS 1256 Query: 1219 RTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLS 1278 RT +++E TLI+ + N++R + I +++ +L KE ++P L + E ++ Sbjct: 1257 RTEQSQEDTLIIAYTNKERDTITEHIRHGLQQSNQLHKENTLMPRLRSIGATKEE---MA 1313 Query: 1279 TWETHRDALVLV--DNVYHRIAGISKDDGLITLQD-AEGNTRLISPREAVAEGVTLYTPD 1335 T ++ LV+ + I + L+T+++ + G R P+ + + L+T Sbjct: 1314 TMLPYKKGLVVKTGKDTLSTIIHVDNKHNLVTVKEQSTGKERPFFPKNSDHKMTNLFTRS 1373 Query: 1336 TIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHID 1395 + T D++ +D+++G AN+ +TV+ + + +TLS+ +Q + + H D Sbjct: 1374 DQPLSTNDKVMMRMTDKDKGIEANTPYTVSNIENNLITLSNKKQHTITLSTTDLKDAHWD 1433 Query: 1396 LAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDN 1449 +Y TA+ AQGA T+ + +G R + AY+ L+R +HV++YTDN Sbjct: 1434 YSYTRTANMAQGA--TYKNVITAIKG-RGQLTNIRRAYIDLTRASEHVKLYTDN 1484 >UniRef50_Q8D674 ATP-dependent exoDNAse, alpha subunit n=14 Tax=Vibrionales RepID=Q8D674_VIBVU Length = 1928 Score = 459 bits (1180), Expect = e-127, Method: Compositional matrix adjust. Identities = 451/1577 (28%), Positives = 733/1577 (46%), Gaps = 189/1577 (11%) Query: 1 MMSIAQVRSAGSAGNYYTDK----------------DNYYVL-GSMGER--WAGRGAEQL 41 MMSI+ +RS +A YY ++ DNYY+ GE W G+ A++ Sbjct: 1 MMSISPLRSPSNAAQYYLNEENTQDLPDTSLEKDASDNYYLKEKQQGENTFWHGKLAQEA 60 Query: 42 GLQGS-VDKDVFTRLLEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDK 100 GL G V++ +L G L D + +D H+ G+DLTFSAPK+ S++A++GGD Sbjct: 61 GLLGKPVEQKTLETILSGTLNDETIKGKRED----HKSGFDLTFSAPKNASILALVGGDS 116 Query: 101 RLIDAHNQAVDFAVRQVEALASTRVMTD--GQSETVLTGNLVMALFNHDTSRDQEPQLHT 158 RLI+AHN AV FA+ ++E + T+ G+ E T +++ A+ H TSR+ +PQ+H+ Sbjct: 117 RLIEAHNNAVKFALSELEKDVAQATHTNEAGEREFHNTQSMIFAVVRHKTSRNNDPQVHS 176 Query: 159 HAVVANVTQ-HNGEWKTLSSDKVGKTGFI----ENVYANQIAFGRLYREKLKEQVEALGY 213 HA+ AN+T+ G +TL+S+ K G I E +Y Q + LY+ + + E LG+ Sbjct: 177 HALAANMTRDQEGNLRTLASNLKQKGGVINGSGERIYNFQKYYTALYQSQFARESEELGF 236 Query: 214 ETEVVGKHGMWEMPGVP---VEAFSGRSQTIREAV---GEDASLKSRDVAALDTRKSKQH 267 +T+ +G +++ GVP +AFS R Q I + V G D SRD AALDTR+ K + Sbjct: 237 QTKGLGN-AQFDIDGVPESLHKAFSTRKQQIDQQVMEFGHDTQ-ASRDTAALDTRQRKTY 294 Query: 268 VDPEIKMAEWMQTLKETGFD---IRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAI 324 +W QT+K GFD + A Q+ G A Q +A + A+ Sbjct: 295 HSDSTLNHKWQQTVKGEGFDPALLVKQSQAMPQKG-------GHAMQQA---HEAFSHAM 344 Query: 325 AGLSERKVQFTYTDVLARTVGILPP---ENGVIERARAGIDEAISREQLIPLDREKGLFT 381 L + + V+ + I+ + DE I QL+PL EKG +T Sbjct: 345 THLGQYSTSLSLEKVIEVAASDFTKGTQQANAIDLKQVA-DEWIKNGQLVPL-AEKGHYT 402 Query: 382 SGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQG- 440 S + +E ++ +++ R + E ++ R +++ +R +A + G Sbjct: 403 SQTMLKNEKALMDITKGRTHNMRTNI-DEPTLNR-------LNIAQDNRQKVADLYGSTK 454 Query: 441 -----GAAGQRERVAELVMMA-REQGREVQIIAADRRSQMNMKQD-ERLSGELIT----- 488 G E++A+ ++ A G+ VQ+++ + + + +Q+ R S +T Sbjct: 455 QFHVVNVFGSSEQIAQNLLNAGNHSGKRVQLVSQNTQHHRHNQQNIPRESHTFVTWVKHL 514 Query: 489 ---GRRQLLEGM-----AFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITD---S 537 +R L+G+ T ++VD K+S E L+L + A N +V++ + + Sbjct: 515 FQDDQRHTLQGLLDSKHPLTNKDIILVDNANKMSANELLSLSEKAGNSNSKVILLNRVSN 574 Query: 538 GQRTGTGSALMAMKDAGVNTYRWQGGEQRPATI--ISEPDRNV--RYARLAGDFAASVKA 593 Q SA+ V T+ W +Q + + + D N+ YA L A V A Sbjct: 575 RQGMKAHSAIDLYSKGNVTTHTWVNSKQADSVVRLHNREDHNIALTYADLPDKTNAQVLA 634 Query: 594 GEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPG 653 SGV EQ LT IR+ LK G L VT+ P +L + Y+ G Sbjct: 635 -------TSGV-EQRRLTNEIRAALKNDGQLSRTSVTVFTQQPHYLSKPQQQFAKHYQSG 686 Query: 654 MVMEQWNPETRSHDRYVIDRVTAQSHSL-TLRDAQGETQVVRISSL---DSSWSLFRPEK 709 M + QW+ + + HD +VI V S++L L G+ SS + L++P+ Sbjct: 687 MTLRQWD-KGKPHD-FVIASVDKASNTLEVLSKTDGKASTFDPSSKAFQSMNMQLYKPDA 744 Query: 710 MPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLP---VSDSPFT 766 + ++ GER+ T K ++ G V S++++++T + + + +TLP + D+P T Sbjct: 745 LEISQGERILATNKHFPSQLEAGHHYLVTSITKNSLT-LTNQQGQSSTLPLDKLKDAPLT 803 Query: 767 ALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDET--RTA 824 + + H T+ S + A LN L S + +++ E + Sbjct: 804 Y-----DYAHSANHFEPREHTLL-SGKAFTLSKALLNDLTESSARLDIFTDHPEKAQQAL 857 Query: 825 EKLARHPSF---TVVSEQIKTR----AGETSLETAISHQKSAL----HTP-AQQAIHLAL 872 EK PS + ++ I R A E++L I H L H P +Q+A+ AL Sbjct: 858 EKAEVRPSAIERVLHTQHINDRYLSEATESTLRHDIEHAIGVLAKEQHAPVSQKAVDFAL 917 Query: 873 PVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQI-KRGDLLYVDVAKGYGTGLL 931 + K+ F+ +L+ EA FA E T I A++ +R D L + + G Sbjct: 918 NHLSEKEAGFTQKELVIEAVRFAFEETNSPITKAHIEAELAERSDTLSAEYSDG---TRW 974 Query: 932 VSRASYEAEKSILRHILEGKEAVMPLM--ERVPG--ELMEKLTSGQRAATRMILETSDRF 987 + A+ E EK IL +I +GK P ++V E LT GQ+ + +I T D F Sbjct: 975 TTEAAIETEKHILSNIEQGKGQHSPFATSKQVHSYLEAQSCLTHGQKNSIHLISTTKDSF 1034 Query: 988 TVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVDAQTLASFL 1047 +QG AG GK+T + + +++ +++GL PTH AVGE+ S GV AQTL S L Sbjct: 1035 VAIQGLAGTGKSTMLETNIELIAQAGKNQPDQIIGLAPTHSAVGELESKGVKAQTLESLL 1094 Query: 1048 HDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIA 1107 T ++Q D+ NTLF LDESSMV N L+ +AV GD +QL ++ Sbjct: 1095 --TDIRQGRASPEDYKNTLFFLDESSMVSNKQAKELTDLVLQSQSKAVLLGDKEQLLSLN 1152 Query: 1108 PGQPFRLQQTRSAADVAIMKEIVRQTPELRE-------AVYSLINRDVERALSGLESVKP 1160 G+PF L T+ D A + E + T +R+ AV++++++ + AL L Sbjct: 1153 AGKPFELAMTKGIIDTAQIIESEQMTDIIRQRNKATLGAVHNILDKQPDSALDKLS---- 1208 Query: 1161 SQVPRQEGA---WAPEHSVTEFSHS-QEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDY 1216 Q+GA +H ++ + + Q+ + +AQQ A E P YE + +DY Sbjct: 1209 -----QQGADKQGKTQHVISTLTDNPQDPR--KAQQIAT---EKLP------YE-VAQDY 1251 Query: 1217 TGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRR 1276 RT E RE TLI+ + N +R + I K ELGKE V+VP L + EL+ Sbjct: 1252 LSRTQETRENTLIIAYTNNERDAITEHIRHGLIKKNELGKENVIVPRLRSIGASGEELKT 1311 Query: 1277 LSTWETHRDALVLVDN--VYHRIAGISKDDGLITLQDAE-GNTRLISPREAVAEGVTLYT 1333 + ++ LVL Y I + + G++ ++ E G PR + L++ Sbjct: 1312 MMPYQK---GLVLSTKPGQYGTITKVDSEHGVVVVKSHETGKESAFLPRHRDHKFTALFS 1368 Query: 1334 PDTIRVGTGDRM--RFTKSDRERGYVANSVWTVTAVSGDSVTL-SDGQQTREIRPGQEQA 1390 + TGD++ RFT D+ RG AN V + ++V S Q+ I P ++ Sbjct: 1369 VSHKPLSTGDKIITRFT--DKTRGIKANVVHHIVQADNNAVIAQSKNGQSLTIDP-EKIK 1425 Query: 1391 EQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDN- 1449 + H D AY TA AQGA T+ + +G + + AY+ L+R +HV++YTDN Sbjct: 1426 DGHWDYAYTRTADMAQGA--TYQNVITSIKG-KGALTNLRRAYIDLTRASEHVRLYTDNP 1482 Query: 1450 RQGWTDAINNAVQKGTA 1466 +Q ++ V K +A Sbjct: 1483 KQMMKSWLSKEVNKASA 1499 >UniRef50_B2VB36 TraI protein n=1 Tax=Erwinia tasmaniensis RepID=B2VB36_ERWT9 Length = 1979 Score = 439 bits (1128), Expect = e-121, Method: Compositional matrix adjust. Identities = 394/1321 (29%), Positives = 628/1321 (47%), Gaps = 102/1321 (7%) Query: 318 QAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGV-IERARAGIDEAISREQLIPLDRE 376 + + A++ LS RK F+YTDV+ EN V + ID AI +LIPL+ E Sbjct: 394 RVIHTALSSLSNRKRDFSYTDVVLEIAAST--ENVVSLRYGEHLIDRAIETGKLIPLNDE 451 Query: 377 KGLFTSGIHVLDELSVRALSRDIMKQNRV--TVHP-EKSVPRTAGYSDAVSVLAQDRPSL 433 K FT+ ++DE V L+RD + V T P E +P A DRP + Sbjct: 452 KTRFTAQTLLIDEKVVVELARDHVANGLVSGTKKPLENLLPELA-----------DRP-V 499 Query: 434 AIVSGQGGAAGQRERVAELVMMAREQGREVQIIA--ADRRSQMNMKQDERLSGELITGRR 491 I + G + + +++ ++GR V +++ A RR Q+ +E++ R Sbjct: 500 TIFTAPSTVRGVKAVIDKVISDQEDRGRSVTVLSPTASRRDQIAFATEEKMI------FR 553 Query: 492 QLLEG-MAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSALMAM 550 L E F STVIVD E++S ++++ LL A +N+Q+++ ++ R+ + L Sbjct: 554 DLSEPETTFARNSTVIVDNAERMSARDSINLLSHARENNLQLVLINTAGRSSQTNVLSLF 613 Query: 551 KDAGVNTYRWQGGEQRPATIISE-PDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAI 609 +D G +T + + + + +S PD+ R +A ++AA+ V +++ Sbjct: 614 EDGGASTGKVKTEHESLSVKVSHAPDKAQRGKDVASEYAAAFADTVRPVVVAPTAQDRRQ 673 Query: 610 LTQAIRSELK-TQGVLGLPE-VTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHD 667 +T IR+ LK + G+ GL + V + A + V++ + +R G V+E R Sbjct: 674 ITDDIRASLKESGGIDGLAQGVMVEARNEVFMTIAEKKKVASWRTGYVIEDRT--ERKPQ 731 Query: 668 RYVIDRVTAQSHSLTLRDAQGETQVVRISSLD-SSWSLFRPEKMPVADGERLRVTGKIPG 726 Y + + ++ SL L + +GE V+ S++ +F + V GE L+ + + Sbjct: 732 VYTVGSIAEETKSLILYNDKGERSTVKASAMGRKDVRVFESTMIEVVPGEVLKASAALKN 791 Query: 727 LRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSA 786 + D L+V S +T + TL + + A G+V G Sbjct: 792 QGIRAKDSLRVHEASGREITGFNERTGKEFTLYTQEPVYAAY----GYVSGMGEVNRAEG 847 Query: 787 TVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGE 846 TV A++++ ++ +N L SG + +YS LDE T K+ V+E + + A + Sbjct: 848 TVIAALSKRDLNANNINSLNMSGSSLSIYSPLDEKATVSKIQNMNLRNTVTEYVISTAQK 907 Query: 847 TSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGG 906 ++ A ++ K + TP A++ A+ V+ +++ LL+ A T E+ Sbjct: 908 PDIDAATTYLKEHVATPMAIAVNRAIAGVQ--EVSVYATTLLSSALKLDRRLTA-AEVRN 964 Query: 907 EINAQIKRGDLLYVDVAKGYGTGL-LVSRASYEAEKSILRHILEGKEAVMPLMERVPGEL 965 EI+++I GDL+ ++ +V RA+YE EK IL + G PL+ RV Sbjct: 965 EIDSRIATGDLISLNGGTTTTDNPRVVPRATYEVEKDILGMVTAGYATKQPLVIRVEEGK 1024 Query: 966 MEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVN-MLPESERPRVVGLG 1024 ++ LT+GQ+ AT IL +D F VQG+AGVGKTT+ + S +N +LP E + G+G Sbjct: 1025 LDHLTAGQKGATGDILTGTDTFQFVQGFAGVGKTTKLTTLQSVLNELLPGLE---IRGIG 1081 Query: 1025 PTHRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAY 1084 PTHRAVGEM AG+ AQT SF+ D+ + +G D NTLF++DE+SMVGN+DM Sbjct: 1082 PTHRAVGEMSGAGIHAQTAKSFVLDSLKDEANGVKQDHRNTLFIVDEASMVGNSDMRDTL 1141 Query: 1085 ALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTP-ELREAVYSL 1143 LI GGRAV GD Q I G PF+L Q R+ A +++M++IVRQT LREAVYS Sbjct: 1142 GLIDRAGGRAVVIGDRQQFLPIESGAPFQLAQERTPARLSVMQDIVRQTNLALREAVYST 1201 Query: 1144 INRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPD 1203 IN D +L LE++ VPR+E + + + + A L+G A Sbjct: 1202 INGDHSGSLRQLEAISNDLVPRRE------------VYRENPRFSGAS----LQGNAS-- 1243 Query: 1204 VPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGEL-GKEQVMVP 1262 + DY RT EAR T+++T N+ RR +N +I + G L V V Sbjct: 1244 -----SSTVAEDYLSRTDEARAGTMVITGTNKIRREINDLIQQGLVQDGSLSAARHVDVS 1298 Query: 1263 VLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISK--------DDGLITLQDAEG 1314 V + + +W R +V+ D+ Y R+ + D GL D G Sbjct: 1299 VYSQILLPSTAFHDPDSW--IRGRVVINDSAYFRVEKVGNEGVTVRHMDSGLHQEWDYRG 1356 Query: 1315 NTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTL 1374 L S R + ++ + R GDR+ K+D + G +N + + A+ + + Sbjct: 1357 ---LDSTR------MEMFDVEQTRFLEGDRVLLRKTDIDTGKTSNEAYRIQAIRDNGQIV 1407 Query: 1375 SDGQQ-TREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAY 1433 +G+ R+I P ++HIDL YA+T+ GAQGAS + I GTEG + + Y Sbjct: 1408 LEGKSGVRQIDPALTAQDRHIDLGYAVTSTGAQGASARYDIGFMGTEGAESRLTNARAYY 1467 Query: 1434 VALSRMKQHVQVYTDNRQGWTDAI--NNAVQKGTAHDVFEPKPDREVMNAERLFSTAREL 1491 + +SR K+H Q+YTDN +A N K TAHD+ + D +A+ L A L Sbjct: 1468 ILISRAKEHAQIYTDNTPAKLEAAIGINREPKHTAHDLLHARKD--ASHAQTLSQFAASL 1525 Query: 1492 RDVAAGRAVLRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDG 1551 AGR + L G S + ++ P V LPA+D NGK +G+ L G Sbjct: 1526 DTFYAGRVLAESFSLDIGTSALKLLSRTPTAPL-RVMLPAYDYNGKVSGVNTWALAAARG 1584 Query: 1552 NGLRGFS-GEGRVKGSGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIAGE 1610 FS GE + + + F +Q E L A + D + +A NP + V+ +A E Sbjct: 1585 E----FSLGEQQTQTESNTLFSVVQRGNTPEVLSAGTLSDALTLAGKNPQASVI--LAPE 1638 Query: 1611 G 1611 G Sbjct: 1639 G 1639 Score = 256 bits (654), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 135/316 (42%), Positives = 188/316 (59%), Gaps = 21/316 (6%) Query: 2 MSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRLP 61 MS+ + S+ A YY+ DNYY +G + W G+ AE++GL GSVD F LL+G P Sbjct: 1 MSVQTLSSSSGAAGYYSQADNYYFVGELLTGWHGKLAEEMGLSGSVDLKTFASLLDGITP 60 Query: 62 DGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEALA 121 DG + + HRPG DLTFSAPKS+S++A++GGD+RLI A ++V + ++E+ Sbjct: 61 DGRKMGK------NHRPGLDLTFSAPKSLSVLALVGGDERLIQAFQESVRDTITEIESFI 114 Query: 122 STRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDKVG 181 STRV D Q+ TG + A F HDTSR+ +PQLH H + N+T+ NG+ +LSSD Sbjct: 115 STRVTKDKQTSIETTGKGIFATFVHDTSRNLDPQLHMHVLTMNITEKNGKLYSLSSDNRY 174 Query: 182 KTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVEA---FSGRS 238 GF+E VY + FG + R L+++V LGY+T K G+WE+ GVPV FS RS Sbjct: 175 GNGFMEMVYTHHTLFGTIQRNILEKKVTTLGYQTRPTEK-GLWEIQGVPVSLLGHFSSRS 233 Query: 239 QTIREAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQR 298 + IR AVG+ AS SR +AALDTR KQ D + EW +++ GFD+ + A ++ Sbjct: 234 RDIRRAVGDSASFSSRSIAALDTRSPKQVPDRSELLNEWNAAIRDHGFDMGEFISTAREQ 293 Query: 299 ADLRTLTPGPASQDGP 314 A QDGP Sbjct: 294 A-----------QDGP 298 >UniRef50_A9L6G5 Conjugative transfer relaxase protein TraI n=7 Tax=Gammaproteobacteria RepID=A9L6G5_SHEB9 Length = 1986 Score = 435 bits (1119), Expect = e-120, Method: Compositional matrix adjust. Identities = 445/1658 (26%), Positives = 725/1658 (43%), Gaps = 287/1658 (17%) Query: 1 MMSIAQV-RSAGSAGNYYTDKD---------------------NYYVLGSMGE---RWAG 35 M+SI+ + SAG A +YY ++ NYY+ E +W G Sbjct: 1 MLSISPIASSAGGAASYYLSEEKNLNLPDVSLEKAADAKEGETNYYLKEQSAEPNTQWFG 60 Query: 36 RGAEQLGLQGS-VDKDVFTRLLEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMA 94 + AEQ G+ G V++ +L G L D ++ ++ R G+D TFSAPKSVS++A Sbjct: 61 KLAEQEGMLGKPVEEHQLKEVLAGSLND----QTLKTQNSNARNGFDFTFSAPKSVSLLA 116 Query: 95 MLGGDKRLIDAHNQAVDFAVRQVEALASTRVMTDGQSETVL---TGNLVMALFNHDTSRD 151 ++GGDKRL+ AH+ AV FA+ +E A+ T+ ++ TGNL+ A+ H TSR+ Sbjct: 117 LVGGDKRLMTAHDDAVKFALSHIEKDAAQARQTNPDTKATSFENTGNLLFAMVRHKTSRE 176 Query: 152 QEPQLHTHAVVANVTQHN-GEWKTLSSDKVGKTGFI----ENVYANQIAFGRLYREKLKE 206 ++PQLHTH++ AN+T+ + G + L+S K G I E VY +Q + LY+ L Sbjct: 177 EDPQLHTHSLTANMTKDSEGTLRALASSFKQKGGIINGTGERVYNHQKYYTSLYQSALAR 236 Query: 207 QVEALGYETEVVGKHGMWEMPGVP---VEAFSGRSQTIRE---AVGEDASLKSRDVAALD 260 VE GY+T +G + ++E+ GVP ++ FS RSQ I E ++G D S +RDVAA D Sbjct: 237 SVEQAGYQTRSLG-NNLFEVEGVPQSLLDTFSTRSQQINEQTQSLGLD-SQAARDVAAKD 294 Query: 261 TRKSKQHVDPEIKMAEWMQTLKETGFDIRAY-RDAADQRADLRTLTPGPASQDGPDVQQA 319 TRKSK + +W +GF++ ++ D+ + L L PA+ D A Sbjct: 295 TRKSKAYTSEATLFEQWKNKANNSGFNLTSFVTDSMSRETSLNALALKPAAID------A 348 Query: 320 VTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARA----------GIDEAISREQ 369 V++AI S + +F Y ++ E+ +E R +D+ I Sbjct: 349 VSRAIEHASNTQNRFNYAKLV---------ESATLEFTRGQKLDALDIKLALDKHIEDGA 399 Query: 370 LIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQD 429 LIPLD+E FTS H+ E ++ E P+TA V Sbjct: 400 LIPLDKESATFTSAAHIKAETNLL----------------ESIKPKTANMRQVVDT---- 439 Query: 430 RPSLAIVSGQGGAAGQRERVAEL-----------VMMAREQ------------GREVQII 466 + G+G A +++V+EL V + EQ G+ + II Sbjct: 440 ----NTLQGKGLNADNQKKVSELFASTKQVNLVNVFGSSEQLATALLNVGEANGKRIHII 495 Query: 467 AADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGST-----------------VIVDQ 509 D +S++ + ER+ + T + ++ F P T ++V+ Sbjct: 496 TPDMKSKL--QTSERVQRDSSTVVKWIMNH--FKPDHTHTLSSFTKTANNTNRDILVVEN 551 Query: 510 GEKLSLKETLTLLDGAARHNVQVLI---TDSGQRTGTGSALMAMKDAGVNTYRWQGGEQR 566 KL L + LL A N +V++ ++ Q G+A+ +K VN W +Q Sbjct: 552 ANKLGLNDFNALLAQAKAGNSKVILLNHANAKQGMKAGNAIEVLKKGNVNESNWVATKQS 611 Query: 567 PATI-ISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAI--LTQAIRSELKTQGV 623 + + E + R +A +A + E+ QV + + L AIR+EL+ QG Sbjct: 612 NTAMRLHESKDSDRVNLIAKTYA---QLPEKQHTQVIAGTHKDVKQLNSAIRAELQNQGD 668 Query: 624 LGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPE--TRSHDRYVIDRVTAQSHSL 681 + + + L+PV+L ++ R + Y GMV+ QW + +D V +++L Sbjct: 669 VSRLGLNIPTLNPVFLSAQQREVVGQYTKGMVLTQWQKVGGRNQQQQLTVDSVNRDNNTL 728 Query: 682 TLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVS 741 TL D G + S ++ S F+ + +A K L ++ GD+L +A+ Sbjct: 729 TLIDKNG-----KASEINPSSKAFKAAEYVIA---------KPDNLHIANGDKLIMATNH 774 Query: 742 EDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPG-----HSVSDSATVFASVTQ-- 794 +D+ +S +T L WV HSV SA A + Sbjct: 775 QDS--------------GLSKQIYTINALSKEWVTLKDESGKQHSVKASALHHAPLNHGY 820 Query: 795 -MAMDNATLNGLARSGRDVRLYSS----LDETRTAEKLARHPSFTVVSEQIKTRAGETSL 849 NA+ N + +++ YS+ L +T T + + FT ++Q R ++ + Sbjct: 821 ATTPSNASPNA-SHHIVNIKAYSASKEWLHDTLT-QGIKHIDIFTDKAQQFDDRLEKSEV 878 Query: 850 ---------------ETAISHQKSALHTP------------------AQQAIHLALPVVE 876 E ++ Q +AL T A+ A+ + Sbjct: 879 KPSSISRIMQAADMPEKFVNSQTTALLTQDVTAALNAIGAQHQDKGLIHNAVDFAIQHIS 938 Query: 877 SKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVD------VAKGYGTGL 930 K+ +S +L+ A +A E G + EI ++ D ++ Y G Sbjct: 939 EKEAGYSQKELIVNAIKYAFEEKGTSITQHEIINTLQHMATNSTDKGAPSLLSAEYHDGT 998 Query: 931 -LVSRASYEAEKSILRHILEGKEAVMPL--MERVPGELMEK--LTSGQRAATRMILETSD 985 ++A+ + E IL + GK+ + PL +E L + LT GQ+ AT +I T D Sbjct: 999 RWTTQAAIDTEVRILDRLQAGKDQLAPLTSVEHATQVLSQNQSLTDGQKDATLLITTTKD 1058 Query: 986 RFTVVQGYAGVGKTTQFRAVM-------SAVNMLPESERPRVVGLGPTHRAVGEMRSAGV 1038 RF VQG AG GK+T + S +N P+ + +GL PTH AV E++ V Sbjct: 1059 RFVGVQGLAGTGKSTMLETGIDLVKQSESILNTQPDKTPTQFIGLAPTHAAVNELKDKNV 1118 Query: 1039 DAQTLASFLHDTQLQQRSGETPD-FSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVAS 1097 ++QT+ S L + Q PD ++NT+FLLDESSM N M + LI G RAV Sbjct: 1119 ESQTVQSLLSNFLSQDAK---PDQYANTVFLLDESSMTSNAQMDKFTHLIETTGARAVFL 1175 Query: 1098 GDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVR-QTPELREAVYSLINRDVERALSGLE 1156 GDT QL + G+PF L + A + MK+IVR Q L AV+++++R E A+ ++ Sbjct: 1176 GDTKQLTSQEAGKPFELALNKGAINSVTMKDIVRQQNSTLLSAVHNIVDRQGESAIDKIQ 1235 Query: 1157 SVKP---SQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQ-------QKAMLKGEAFPDVPM 1206 P P A PE T + ++ Q + L EA P Sbjct: 1236 QQLPFDQYTAPTANDAVTPEKQATANINQSLNIISTLQLITDNPKKNQQLATEALP---- 1291 Query: 1207 TLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVR---EKAGELGKEQVMVPV 1263 + +Y RTP+ARE TLI+ + N++R + + H++R ++ L EQ VP Sbjct: 1292 ---ATVALEYLARTPKARENTLIIAYTNKER---DDITHEIRQGLQQQKSLSTEQFTVPR 1345 Query: 1264 LNTANIRDGELRRLSTWETHRDALVLV--DNVYHRIAGISKDDGLITLQDAE-GNTRLIS 1320 L + E L+T ++ L+L + Y I + K + ++TL D + G + Sbjct: 1346 LRGVHASKAE---LATMLPYQQGLILTTGKDSYFEIMKVDKLNNMLTLADMKTGEEKHFF 1402 Query: 1321 PREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQT 1380 P+ + L+ + GD + KSD +R N +TV+++ + L Sbjct: 1403 PKNHGHKFTNLWAKSEQPLAEGDSIMLRKSDIDREMQGNKTYTVSSIDDKQMQLKSTDNH 1462 Query: 1381 REIRPGQEQAEQHIDLAYAITAHGAQGAS-ETFAIALEGTEGNRKLMAGFESAYVALSRM 1439 ++ + H D AY TA AQGA+ E A++G + + AY+ ++R Sbjct: 1463 TLTLSTKDLKDAHWDYAYTRTADMAQGATYENVITAIKG----QGALTNVRRAYIDITRA 1518 Query: 1440 KQHVQVYTDNRQ----GWTDAINNAVQKGTAHDVFEPK 1473 +HV++ TDN Q W + N V D + P+ Sbjct: 1519 SKHVKIITDNPQKMMLSWVNNDPNKVSALETRDKYYPE 1556 >UniRef50_D1RMM7 Conjugative transfer relaxase protein TraI n=2 Tax=Legionella RepID=D1RMM7_LEGLO Length = 1956 Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust. Identities = 423/1565 (27%), Positives = 716/1565 (45%), Gaps = 188/1565 (12%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYV-----LGSMGERWAGRGAEQLGLQGSVDKDVFTRL 55 M+++ ++ +A A +YYT +DNYY+ L S+ RW G GA++L L G ++ F +L Sbjct: 1 MLTLNKISAAKDAVHYYTTQDNYYLSDRDSLNSLS-RWIGNGAQKLQLSGQIEPSQFLQL 59 Query: 56 LEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVR 115 L+G+LP G L + G +HRPG D+T SAPKSVS++A++G D+RL+ AH +AV Sbjct: 60 LDGQLPSGQLLGIIDKGERQHRPGTDVTLSAPKSVSILALVGQDERLVQAHQEAVTITFG 119 Query: 116 QVEALAS-TRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH-NGEWK 173 ++E LA+ R+ +G++ T NLV A+F H TSR+ +P LHTH + N+T+ +G W+ Sbjct: 120 RIEQLAAEARITFNGETTFEKTRNLVAAMFVHTTSRELDPDLHTHLPILNMTERSDGLWR 179 Query: 174 TLSS----DKVG-KTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPG 228 +LSS DK GF E +Y+NQ G +Y L ++V+ LGY+ + ++G +E+ G Sbjct: 180 SLSSRAKNDKEHLDHGFRELIYSNQHYLGLVYMSSLAKKVKDLGYDIRIKDRYGNFEVVG 239 Query: 229 VPVEAFSGRSQTIREAVGED------ASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLK 282 + EA + S+ R + +D +S K+ + + L TR K +D ++ +W++ +K Sbjct: 240 ISDEAITATSKR-RVQILDDMKERGTSSAKAAEKSNLSTRNPKMEIDSQVLHQQWVEEIK 298 Query: 283 ETGFDIRAYRDAADQ---RADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTY--- 336 E G D+R + R +++ P S PD Q+AV A+A LSE Q + Sbjct: 299 ELGIDLRGVIQESKLNIGRGAIKSTQITPLS---PDAQKAVNDALAHLSEYSTQIQHGAL 355 Query: 337 -TDVLARTVGILPPENGVIERARAGIDEAISREQL--IPLDREKGLFTSGIHVLDELSVR 393 + + G++ E+ IER I+ +S E L PL+ +T+ S+ Sbjct: 356 VRQAMTFSAGLVEHED--IERE---IESLLSVETLQGNPLE----YYTTA-------SLL 399 Query: 394 ALSRDIMKQ--NRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAE 451 A +D + + N + SVP S + ++ + I+ G ++E + + Sbjct: 400 AREKDFIAKTTNELKASFSISVPNHG----LTSSVFKNNERIQIIDV-AGFRCEKELIQD 454 Query: 452 LVMMAREQGREVQIIAADRRSQMNMKQD-ERLSGELITGRRQLLE--------GMAFTPG 502 +V +A ++ ++ D + L I+ + L + G + G Sbjct: 455 MVDLAEANQLNSYVLHPGSLKTQQLRADIKHLDTGFISRIKNLFKDDIVHTVSGFQYHYG 514 Query: 503 S-------------TVIVDQGEKLSLKETLTLLD-GAARHNVQVLITDSGQRTG--TGSA 546 VIV +KLS + L D A + +L+ +S G G+ Sbjct: 515 KHIKASPFTKKKQDLVIVHDAQKLSFDDLSALSDMTQASQSKLILLNNSAGTLGFSAGNP 574 Query: 547 LMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVRE 606 + +K+ GV++Y+ + +S + + + A + + ++S ++ Sbjct: 575 IKVLKEQGVHSYQSLTTPIKGELKLS-VGKQINKSMSAAWLQLTPEQQQKSALVALNSKQ 633 Query: 607 QAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSH 666 + +T+ IR L QG L + L+ V L + Y+ G + +N E R Sbjct: 634 KEAITRQIREGLVQQGQLSRQMKKVAVLATVSLTQTEKGYAHSYKTGDNITFYN-EGRIP 692 Query: 667 DRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPG 726 Y + V S L L +AQG+T + + + + R + + +A GERL + Sbjct: 693 KHYKVCEV--DSKGLHLENAQGKTSLFAYET-KEDFRVSREKILEIAVGERLINEQSLYH 749 Query: 727 LRVSGGDR--LQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSD 784 RV + V+ V+E+ + V R E TL +++ + + + + P D Sbjct: 750 QRVKYAPKSSFVVSKVTEEGIYV----RHESNTLFLTNKVLSEHHFDYDYCKKPHEIKPD 805 Query: 785 SATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRA 844 + V + ++ + + + + V L++ DE + L R EQ+K A Sbjct: 806 TNQVLVAAKPYQLNRNLIGEIGENAQHVLLFTE-DEPKAQRFLER--------EQLKWTA 856 Query: 845 GETSLETA------ISHQKSALHTPAQQAIHLALPVVESKK------------------L 880 E + I++ AL IH E KK Sbjct: 857 YEVQQKKPDLVYRDIAYANKALAREINSLIHHLELKSEDKKGIAATALTYALAKCTERNA 916 Query: 881 AFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAE 940 AF DL+T A A F ++ + A++ L+Y+D Y T ++ + E Sbjct: 917 AFKHSDLITHALMHALGEADFEDIAPLLKARMA-DSLVYLDT---YWT----TKEALHIE 968 Query: 941 KSILRHILEGKEAVMPLMERVPG--ELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGK 998 ++IL+ + + V P+ V L E LT GQ+ A +++ TSDRF +QG AGVGK Sbjct: 969 EAILKANYQEQNTVQPIEPSVQKLLSLPETLTQGQKDAITLVVSTSDRFVSIQGLAGVGK 1028 Query: 999 TTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVDAQTLASFL-HDTQLQQRSG 1057 TT R V + +S + +V+GL PTH+AV E+ G+ AQT+ SFL +D L Sbjct: 1029 TTMMRHVKD----IAQSNQFQVLGLAPTHKAVEELNVNGIQAQTVDSFLRNDGGLG---- 1080 Query: 1058 ETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQT 1117 +N L ++DESSM+ N R V +GD QLQ++A G P L Sbjct: 1081 -----ANHLVIVDESSMIDNEKYHALQQKCIDTQSRMVFTGDITQLQSLASGIPHELTIK 1135 Query: 1118 RSAADVAIMKEIVRQ--TPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHS 1175 + A M EIVRQ PEL++A R++ +AL ++++ P + +++ P H Sbjct: 1136 SQSQKTAFMTEIVRQNPNPELKKAAEFASRREIGKALELIKNIDPEEYVQRK---TPIHG 1192 Query: 1176 VTEFSHSQ--EAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHL 1233 + SHS E K + + K K ++Y I D+ RTPE ++ TLIV H Sbjct: 1193 L---SHSSLVEIKCMDEEGKKDYK---------SIYRTIADDFLSRTPECQKNTLIVAHA 1240 Query: 1234 NEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNV 1293 +EDR + ++ D K +L + V+ L ++ + + ++E D + N Sbjct: 1241 HEDRTPIEVLLRDGLRKQHQLHNQDVLCKRLFPVSLDQADQVKAHSFEP-GDVIRFGKNY 1299 Query: 1294 YHRIAGISKDDGLITLQ--DAEGNTRLISPREAVAEGV----------TLYTPDTIRVGT 1341 ++K D T++ D E N VA + + Y + + Sbjct: 1300 -----SVAKKDEYFTVKSIDREANKLFCVDESQVAFAISASILPKTMPSFYKLHERPLAS 1354 Query: 1342 GDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAIT 1401 GDR+R ++D RG +AN +TVT V G+SV LS+ + + +EQA+ H D AY T Sbjct: 1355 GDRIRLKRNDDARGIIANEEYTVTQVFGESVGLSNHKNQVTLNL-KEQADLHWDYAYTNT 1413 Query: 1402 AHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAV 1461 A+ +QGA+ F IALE NR ++ S + +R YTDN +G + + + + Sbjct: 1414 AYSSQGATSKFMIALELE--NRLVVTTHRSHEIDATRASHQATFYTDNIEGLVNRLEDPL 1471 Query: 1462 QKGTA 1466 ++ A Sbjct: 1472 KQRDA 1476 >UniRef50_D0Z588 IncF plasmid conjugative transfer DNA-nicking and unwinding protein TraI n=3 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z588_LISDA Length = 1980 Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust. Identities = 407/1521 (26%), Positives = 696/1521 (45%), Gaps = 133/1521 (8%) Query: 22 NYYVLGSMGER----WAGRGAEQLGLQG-SVDKDVFTRLLEGRLPDGADLSRMQDGSNRH 76 NYY+ G + W G+ AE+ G+ G ++ +L G+L + + S+ Sbjct: 55 NYYLAEQSGTKKTTQWYGKIAEKEGILGHEIEHQKLEAVLNGQLNND---QTPRAHSDTR 111 Query: 77 RPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEA-LASTRVMTDGQSETVL 135 R GYDL FSAPK S++A++ GD R+IDAHN AV A+ +E A +V + + Sbjct: 112 RTGYDLVFSAPKGASILALVYGDTRIIDAHNAAVKTALDLLEQDTAQAKVTENKEGRFEN 171 Query: 136 TGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHN-GEWKTLSSDKVGKTGF-----IENV 189 T NL+ L H T+R+ EPQLHTHA+ AN+T N G K L+S V + GF E + Sbjct: 172 TQNLLFGLVQHKTNRNNEPQLHTHALQANMTYDNQGNLKNLASSFV-QNGFETQGTYERI 230 Query: 190 YANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP---VEAFSGRSQTIREAVG 246 N +G Y +L +E +G+ + +G +G ++ G+P +EA S R + I E Sbjct: 231 LENAKYYGMAYHSELGRALEGMGFAIKSLG-NGQIDIDGIPTEVIEANSTRREEILEYAN 289 Query: 247 E--DASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAA---DQRADL 301 E +S KSR +AA TRK+K + + + EW + FD A+ A+ + R D Sbjct: 290 ETGHSSGKSRMIAAHQTRKAKTYTPEDSLVKEWQTKNEALKFDGLAFVAASYNGEHRKDN 349 Query: 302 RTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGV-IERARAG 360 P ++QQA+ +I+ LS+R F Y VL + P+ + + Sbjct: 350 DISVPDK------ELQQAIDNSISYLSDRLSAFGYEKVLVTALDKFAPKAITQMGELKQA 403 Query: 361 IDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGY- 419 +D I LI LD ++ LFT+ V E + + + + + VH + + Sbjct: 404 LDNKIKHGDLIALDDKQSLFTTQEQVDRE--AKLIESTQKRTHGLRVHADSTALNELNLK 461 Query: 420 SDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQD 479 +D LA S V+ + ++ L+ ++ G+ + I ++ + +Q Sbjct: 462 ADTKKTLADILASTKQVNVVNLSGSSKQLSESLLHVSENSGKSIHFITPNKLVKQQTEQQ 521 Query: 480 ER-------------LSGELITGRRQLL---EGMAFTPGSTVIVDQGEKLSLKETLTLLD 523 R +++ Q L E T S ++V+ +L +KET L+D Sbjct: 522 VRRQAFSVTQWVKNAFRPDVVHTAYQYLNQAERRQKTKDSILVVEHANQLGVKETQQLID 581 Query: 524 GAARHNVQVLITDSGQRTG---TGSALMAMKDAGVNTYRWQGGEQRPATI-ISEPDRNVR 579 A R +++ + +R+ G+A+ ++ V T+ WQG + I SE D+ R Sbjct: 582 LAQRQGNKLVFLNHTKRSQGLRAGNAMDVVQKGNVQTHTWQGAQLAQTHIKTSEVDKKER 641 Query: 580 YARLAGDFAASVKAGEESVAQV--SGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPV 637 + LA + K E S QV + + L + IR +L G L V + L+PV Sbjct: 642 HQILAERYQELSKQ-ERSETQVLTTNKGDNDNLNRVIRHQLDKSGQLSEKRVEIPTLNPV 700 Query: 638 WLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISS 697 ++ + Y+ GMV+ Q N +Y +++V +++ +L L D+ + + Sbjct: 701 FMSPEQQRSIKSYQKGMVISQVNDGKVQ--QYTVEKVNSRAQTLQLLDSDNNRSYLNVKE 758 Query: 698 LDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPAT 757 + + + +P+K+ VA G+RLR+ G + + D + V + +++ + Sbjct: 759 SSTPYFVSQPDKIEVATGDRLRINGDVFRTDLKQNDTVTVEKIGWMGLSLT-DDNGKGHL 817 Query: 758 LPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSG-RDVRLYS 816 +P+S +AL G+ T ++ T + TL L + G + + +++ Sbjct: 818 VPLSYLEGSALSY--GYANTLNNAAHGKTTTLVEMQSYTASKETLYELMQQGSKQLHIFT 875 Query: 817 SLDETRTA--EKLARHPSFTV--------VSEQIKTRAGETSLETAISHQKSAL---HTP 863 E A EK PS + + + + ET L++ ++ AL P Sbjct: 876 DNQEKLEARMEKSHIQPSSMARVMASTQSLDKYVNAQTAET-LQSDVTMAVQALLDQQAP 934 Query: 864 A---QQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYV 920 +QA++ AL V ++ F +L+ EA FA + G T L EI+ ++ Sbjct: 935 KPLIEQAVNFALDHVSEQQAGFKHSELVVEAIRFAMDEKGTTVLESEIHNKLNELQQQDS 994 Query: 921 DVAKGYGTGL-LVSRASYEAEKSILRHILEGKEAVMPLM-ERVPGELMEK---LTSGQRA 975 ++ + G ++ + + EK IL + GK V ER + + +T GQ+ Sbjct: 995 VLSAQFSDGTRWTTKEAIDTEKRILTRLDAGKGQVASYASERQADAYLAQQDWMTDGQKE 1054 Query: 976 ATRMILETSDRFTVVQGYAGVGKTT---QFRAVMSAVNMLPESERPRVVGLGPTHRAVGE 1032 A +++ T+DR+T+VQG+AGVGK+T Q + ++ L + V+GL PTH AV E Sbjct: 1055 AIKLMATTNDRYTIVQGFAGVGKSTMLEQGKTLIEQTQALHGNANIDVLGLAPTHAAVNE 1114 Query: 1033 MRSAGVDAQTLASFLHDTQLQQRSGET-PD-FSNTLFLLDESSMVGNTDMARAYALIAAG 1090 ++ G+ AQT S L D +G+T PD + NTLFLLDESSM N AL+ Sbjct: 1115 LKEKGIPAQTTQSLLKDL----LTGDTTPDKYKNTLFLLDESSMASNAQFDAFTALVNNS 1170 Query: 1091 GGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVR-QTPELREAVYSLINRDVE 1149 G RA GD QLQ+ G+PF L + D +MK+I R QTPEL AV ++IN+ E Sbjct: 1171 GARATLLGDIYQLQSKEAGKPFELAYRSKSVDTVVMKDIQRQQTPELLSAVQNVINQQSE 1230 Query: 1150 RALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLY 1209 L ++ P +P G+ + V+ ++ + + A+ + + K E LY Sbjct: 1231 SMLEAIKQQSP--LP---GSHHNQTVVSTYNETGNS----AKDREVAKEE--------LY 1273 Query: 1210 EAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHD-VREKAGELGKEQVMVPVLNTAN 1268 ++ +Y RTPE+RE TL++ + N +R +L +I ++E L K V L Sbjct: 1274 QSAAAEYLSRTPESRENTLMIAYSNRERDILAGLIRKGLKEMKELLDKSDTPVTRLRGIG 1333 Query: 1269 IRDGELRRLSTWE------THRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPR 1322 EL+ + ++ T RD + +D++ R ++ L+ G P Sbjct: 1334 TTKEELKTMMPYKAGLIINTGRDTYLHIDSIDRR------NELLMVTNMTTGEQTSFIPA 1387 Query: 1323 EAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTRE 1382 + TL++ + + +GD++ + K+D+E G N TV+ ++ D++ LS+ Sbjct: 1388 RHDHKMTTLWSSSEMPLTSGDKITWRKTDKELGLTGNMDLTVSDINKDTIMLSNNDGKHV 1447 Query: 1383 IRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQH 1442 + H D Y TA AQG++ I++ +E + AY+ +SR QH Sbjct: 1448 TLSLSDMKSSHWDYRYTKTADMAQGSTTNHVISVIDSEAK---LTNLRRAYIDISRASQH 1504 Query: 1443 VQVYTDNRQG----WTDAINN 1459 ++TDN +G W + +N Sbjct: 1505 AMIFTDNEKGLMRSWLNHFDN 1525 >UniRef50_C9NPT5 Putative conjugative transfer protein TraI n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NPT5_9VIBR Length = 1685 Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust. Identities = 419/1532 (27%), Positives = 679/1532 (44%), Gaps = 167/1532 (10%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGL-QGSVDKDVFTRLLEGR 59 M+++ + SA A YY + + W G+ A++ GL + V+ F L G Sbjct: 1 MLTLIPLSSAARAAQYYLVDEQEKTGQARAGYWLGKLAKEAGLWRQKVEPKCFLEALRGH 60 Query: 60 LPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVE- 118 + A + R ++H PG D+TFSAPKS+S++A+LGGD+RL AH AV +A+ +E Sbjct: 61 VQGEATVGR----RSQHAPGLDVTFSAPKSLSLLALLGGDQRLRQAHEHAVHYALTALER 116 Query: 119 ALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ-HNGEWKTLSS 177 A RV + GQ V TG+L++A+F H TSR +PQLH+HAV+ N+T+ G + L+S Sbjct: 117 EAAQARVQSQGQLAYVETGSLLVAVFEHTTSRAHDPQLHSHAVITNLTRVAQGPLRALAS 176 Query: 178 DKVGKT----GFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP--- 230 ++ G E ++A+Q + LY L + V ALGY E G +++ GVP Sbjct: 177 CTRQRSSVLNGTFERLFAHQKYYSALYHGHLAKSVTALGYRLEPQAN-GAFDIVGVPRSV 235 Query: 231 VEAFSGRSQTIRE---AVGEDASLKSRDVAALDTR--KSKQH-VDPEIKMAEWMQTLKET 284 +EAFS R I++ A G D S +RD+AAL TR K+ +H V+P + EW L Sbjct: 236 IEAFSVRRAQIQQWQRARGWD-SPSARDIAALCTRVEKATEHSVNP---LPEWQSRLVAL 291 Query: 285 GFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQ---AVTQAIAGLSERKVQFTYTDVLA 341 G+ DAA + GP P + + AVT AI L+ + + ++ Sbjct: 292 GYTPEQLLDAARR---------GPPRVPLPMINEANRAVTLAIDHLTRYQTAMSMEHIVQ 342 Query: 342 RTVGILPPENGV-IERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIM 400 + + ++ + +++ I +QLI L +G +T+ + ELS+ A +R Sbjct: 343 VAFDRFNDQPSLTVQAVKNAVEQRIKDKQLIALP-TQGHYTTAELLHRELSLLACARRRH 401 Query: 401 KQNRVTVHPE--KSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMARE 458 K HP +S +A ++ L + ++ QG + V + + R Sbjct: 402 KVPGQRPHPHLLESRHLSAAQRMCLTTLIRSTRPFHVIDVQGEPGALNDHVLDAL---RI 458 Query: 459 QGREVQIIAADRR-----------SQMNMKQDERLSGELITGRRQLLEG-MAFTPGSTVI 506 G ++ + RR + + + +RLS T Q L G V+ Sbjct: 459 SGLGSHVVFSRRRDIRQWWTRHSAAPRSRQWLQRLSSITPTILHQFLAAPPPLRRGEVVV 518 Query: 507 VDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTG---SALMAMKDAGVNTYRWQGG 563 VD +L+ ++ L D + ++++ + R + +AL + V+TY WQ Sbjct: 519 VDDARQLNAEQLRQLCDIVTQSQNKLILLNRHTRQPSAWARNALALFRCGHVSTYVWQSQ 578 Query: 564 EQRPATII--SEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQ 621 EQRP+ ++ E DR++ +RL A++ E + + R A LT +R L+ Sbjct: 579 EQRPSKVVLTGEEDRSL-TSRL---LDAALDPRWE--IRTASRRTHADLTHRVRELLRVH 632 Query: 622 GVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYV---IDRVTAQS 678 G L P V++ A WL + L Y+PGM + R DR+V + V Q Sbjct: 633 GHLSGPSVSLLADVCQWLSPSEQRLTKYYQPGMRLRY-----RYRDRWVQGHVHTVDRQR 687 Query: 679 HSLTLRDAQGETQV-VRISSLDSSWS--LFRPEKMPVADGERLRVTGKIPGLRVSGGDRL 735 + + L +G+ V + ++S +S S ++ + +A GERL T P + + G Sbjct: 688 NCIELMTDKGKVPVRLDLTSEAASLSAQVWVSHPLNIAKGERLIATQNEPNIGLEEGLAY 747 Query: 736 QVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQM 795 +V S TV V + +SD ++ L ++ P +F + Sbjct: 748 RVVKCSP---TVCVLKGPDGGVHRLSDLTRSSWPLAYHYLAGPSDRHPKPYLLFVA-PAY 803 Query: 796 AMDNATLNGLARSGRDVRLYSSLDETRTAEK---------------LARHPSFTVVSEQI 840 + L L R + L++ D+ A + L+ HP+ ++ Sbjct: 804 TLSKTLLEPLCARYRRIDLHT--DDRPLAHQRLEHADVRPCAIERLLSPHPTI----DRY 857 Query: 841 KTRAGETSLETAISHQKSALH--------TPAQQAIHLALPVVESKKLAFSMVDLLTEAK 892 R T +E + K ALH + A+QA+ AL + + AF L+ E+ Sbjct: 858 LDRTAATDIERDV---KQALHLVAPLANASVAKQAVAFALHHCATTQAAFRQRTLVIESI 914 Query: 893 SFAA----EGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHIL 948 FA EG ++ E++ Q + D GT RA + E++IL H+ Sbjct: 915 RFALAESREGLTLNDILAELDGQRTLLSRAFQD-----GTRWTTDRALAQ-ERAILSHLH 968 Query: 949 EGKEAVMPLMERVPGELME-------KLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQ 1001 ++ PL P +E +LT GQR A +I + DRF VQG AG GK+T Sbjct: 969 TQRDTQPPL---TPPSALETLLSTRPQLTPGQRQALSLITTSRDRFVAVQGLAGTGKSTL 1025 Query: 1002 FRAVMSAV-NMLPESERP--RVVGLGPTHRAVGEMRSAGVDAQTLASFLHDTQLQQRSGE 1058 + V+ V + RP +++GL PT AV E++ G+ A TLA L + Q R Sbjct: 1026 LKEVLQLVREAQSDIARPPKQLLGLAPTRSAVRELKRQGLPATTLAQCL--ARYQDRRTS 1083 Query: 1059 TPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTR 1118 + F +LF LDE +M+GN + R L+ RAV GD QL A+ G+PF L R Sbjct: 1084 SATFCRSLFFLDECAMLGNPQLLRFLRLVIDSNSRAVLLGDRHQLLALEAGKPFALAIER 1143 Query: 1119 SAADVAIMKEIVRQ-TPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVT 1177 A + +IVRQ TP LR AV ++ A+ L AP+H+ Sbjct: 1144 GWIKTAYLHDIVRQRTPNLRRAVQHFVDGQPGSAIHCLSKQ------------APDHATR 1191 Query: 1178 EFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDR 1237 + L ++ KA +LY+ +V D+ RTP+ R QTLI+ H + +R Sbjct: 1192 APTIVSTHDLMPSEDKAN----------PSLYQQLVDDFLSRTPDTRRQTLIIAHTHVER 1241 Query: 1238 RVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRI 1297 + +++ R + GEL V P L N E + ++ R L L N Y I Sbjct: 1242 DAIATVMRAARRERGELPDRSVPTPRLRAINTTPAERGTMMPYQPGR-VLSLHPNHYETI 1300 Query: 1298 AGISKDDGLITLQDAEGNT-RLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGY 1356 A + G++TL + + R++ P E LYT + D + F ++ R + Sbjct: 1301 AEVDPTTGIVTLASSTPDAPRVVLPLERDHTHTQLYTLSHPSLSVNDWIVFRQATRGDPW 1360 Query: 1357 VANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIAL 1416 +N + V +S + L + R E A+ H D Y TA AQG + +++ Sbjct: 1361 CSNERYVVERISTTGIQLRSERGQRVAFNPFELAQAHWDYDYTRTADMAQGMTVDCVLSV 1420 Query: 1417 EGTEGNRKLMAGFESAYVALSRMKQHVQVYTD 1448 ++G + AYV +SR + V +YTD Sbjct: 1421 VRSQGA---LTSLRRAYVDVSRARDRVCLYTD 1449 >UniRef50_A9KH87 DNA helicase n=9 Tax=Coxiella burnetii RepID=A9KH87_COXBN Length = 875 Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 173/602 (28%), Positives = 293/602 (48%), Gaps = 60/602 (9%) Query: 865 QQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAK 924 ++A++ + V+ S++ F+ ++ ++ S+ F + ++ ++K G+L+ Sbjct: 43 KKAVNYGISVIASREATFTYQSVVEKSLSYGNANVSFKAVQIDLRERVKSGELMTRQSPS 102 Query: 925 GYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKL-----TSGQRAATRM 979 G LL ++ + E++I+ I GK V P + + E+ KL T GQ+AA + Sbjct: 103 G--DVLLATKETVALEQTIIDQIKSGKNTVTPFL--LKDEIQHKLDASSLTEGQKAACTL 158 Query: 980 ILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVD 1039 + T DRF +VQGYAG GK+T + + A++ + ++ L PTH+AV E++S G++ Sbjct: 159 LATTQDRFVMVQGYAGTGKSTMLQTLQDALSQSNIINKESIIALAPTHKAVKELQSKGIE 218 Query: 1040 AQTLASFL-HDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALI-AAGGGRAVAS 1097 AQT+ SFL + L + D N L LLDESSMVGN D + +++ A Sbjct: 219 AQTVKSFLVGEAHLSLNNYRHLD--NKLILLDESSMVGNRDFQQLQSIVEKAKNCHCAYI 276 Query: 1098 GDTDQLQAIAPGQPFRLQQTRSAADV--AIMKEIVRQT-PELREAVYSLINRDVERALSG 1154 GD QL ++ G+P + AD+ A M E++RQ PEL++ L+ +S Sbjct: 277 GDKAQLLSVEDGKPAEIAYLSREADIATATMSEVLRQKDPELKKITQELM-------MST 329 Query: 1155 LESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVR 1214 ESV + ++ W E S S ++ ++++ QK I Sbjct: 330 PESVDRALTQLKQNGWVIEES----SVDRKGPISDSVQK------------------IAE 367 Query: 1215 DYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGEL 1274 Y + E R T+I NE+R+ +N I +R+ GEL E V +L + + D EL Sbjct: 368 HYCALSLEERTNTVIAAATNENRQTINEAIRVIRQGKGELQGEFVTTTLLMDSRLTDAEL 427 Query: 1275 RRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLIS----PREAVAEGVT 1330 + +V ++N Y ++ + D + L+D + ++++ P+ E V Sbjct: 428 HHSPNYTV--GDVVRLNNQYLTVSKTNHDKNTLILEDGDKQNKVLNLDLMPKR---ETVE 482 Query: 1331 LYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVT---LSDGQQTREIRPGQ 1387 L+ +T + +GD +++TKSD+ERG VA+ VT V+ T LS+ + I Q Sbjct: 483 LFHRETTHIQSGDILKWTKSDKERGLVAHESLRVTHVNKAEHTITALSEKSEHLSIDLNQ 542 Query: 1388 EQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYT 1447 Q QHID YA T HG QGA+ + L + + L YVA++R V+++T Sbjct: 543 PQ-NQHIDYNYAPTVHGLQGATAQSILIL--LDSHNSLSNTMRLLYVAVTRSTHQVRIFT 599 Query: 1448 DN 1449 DN Sbjct: 600 DN 601 >UniRef50_Q0KJG8 DNA helicase n=3 Tax=Sphingomonadaceae RepID=Q0KJG8_9SPHN Length = 1014 Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 134/342 (39%), Positives = 186/342 (54%), Gaps = 35/342 (10%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGER--WAGRGAEQLGLQGSVDKDVFTRLLEG 58 M SIA VRS+G A +Y+ + DNYY + WAG GA LGL+G+V +D F +L G Sbjct: 1 MHSIAAVRSSGGAADYFAN-DNYYTAQESAQAGVWAGEGARALGLEGTVGRDAFEAILNG 59 Query: 59 RLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQV- 117 LPDG + +++ R G DLTFS PKS S++A++ GD+R++DAH AV + Q+ Sbjct: 60 HLPDGDKVGQVEG----RRLGLDLTFSMPKSASILALVSGDRRILDAHMAAVRSTMSQLV 115 Query: 118 -EALASTRVMTDGQS-ETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH-NGEWKT 174 + LA R +S E TGNLV ALF HDTSR +PQ H HAVVAN+T+ G WK Sbjct: 116 EKQLAEGRNYERSRSGEPEKTGNLVYALFAHDTSRALDPQGHIHAVVANLTRDLKGNWKA 175 Query: 175 LSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP---V 231 L + ++ K N G+ Y + Q++ LGYETE GKHG +E+ GVP + Sbjct: 176 LWNGEIWK---------NNTTIGQFYHAAFRAQLQKLGYETEASGKHGAFEIKGVPTAVI 226 Query: 232 EAFSGRSQTIREAVGEDAS--LKSRDVAALDTRKSKQHVDPEIKMAE-WMQTLKETGFDI 288 +AFS R+ I + E + L ++ L TR K V+ +AE W E GFD Sbjct: 227 KAFSTRANEIEAKIAETGATRLATKKQITLYTRDPKLAVEDRAALAEGWKTRAAELGFDG 286 Query: 289 RAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSER 330 + A RA A Q P +++ +QA A ++ER Sbjct: 287 KPLIAEAMARA---------AHQVRPTLRETASQAFAEVAER 319 Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 94/329 (28%), Positives = 147/329 (44%), Gaps = 47/329 (14%) Query: 858 SALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDL 917 SA AQ A A+ + ++ AFS +L+ A F +G + I ++ G L Sbjct: 341 SAETIKAQHATASAIRHLSEREAAFSPQAILSAALGFQIKGLEGGAVALRIGELVREGHL 400 Query: 918 L--YVDVAKGYGTGLLVSRASYEAEKSILRHILEGK---------EAVMPLMERVPGEL- 965 + D G+ L+ + A+ E+ IL I G E M ++ EL Sbjct: 401 IPGKSDRLDGH-YDLVTTPAALGREQQILDRIDAGAGKGRVFMAPEVAMVRLQAAARELG 459 Query: 966 MEK-------LTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERP 1018 +E+ L +GQ AA +L DRF +QG AG GK+T ++ A++ + +E Sbjct: 460 IERAGSDGWQLNAGQLAAGVAVLSGKDRFLNIQGVAGAGKST----LLGALDKVLSAEGV 515 Query: 1019 RVVGLGPTHRAVG-------------EMRSAGVDAQTLASFLHDTQLQQRSGETPDF--- 1062 ++VGL ++ V +MR AG++A T+ASF++ G+ F Sbjct: 516 KLVGLAFQNKMVADLRGGGSGMMTAEQMREAGIEAWTIASFVNRYAGPAAQGQGERFETA 575 Query: 1063 ----SNTLFLLDESSMVGNTDMARAYALIA--AGGGRAVASGDTDQLQAIAPGQPFRLQQ 1116 NT+ + DESSMV + DMA + +IA +A GD QL AI G+ F + Q Sbjct: 576 RTALQNTVIITDESSMVSSRDMA-SLTMIAERLDLAKAPFIGDRQQLSAIEQGKMFAVSQ 634 Query: 1117 TRSAADVAIMKEIVRQTPELREAVYSLIN 1145 A V + + I ++ L AV L N Sbjct: 635 AAGQATVRMDENIRQKGSPLLLAVAGLSN 663 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 17/207 (8%) Query: 1221 PEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTW 1280 PE R +T I T +DR +N ++ K G L V L +AN E+R ST+ Sbjct: 700 PEERARTAIFTAGRDDRTRINGLVQQGLLKEGSLAGPGVPFSTLQSANATREEMRFASTY 759 Query: 1281 ETHRDALVLVDNVYHRIAGISKD---------DGLITLQDAEGNTRLISPR----EAVAE 1327 R VL + R G+ + DG +TL+ +G ++I P + + Sbjct: 760 ---RPGQVLEARMDVRELGLRRGEYDVVAIGRDGKVTLER-DGKRKVIDPDRIDPQHRFD 815 Query: 1328 GVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQ 1387 + LY I + G+ + + + D R ++ V + +G +VTL + + P Sbjct: 816 RIGLYDRKDITLHGGETVFWREKDGPRDIAKSTYAKVVSATGQAVTLELADKRQITLPSS 875 Query: 1388 EQAEQHIDLAYAITAHGAQGASETFAI 1414 + + +DL YA+ AH AQG ++ AI Sbjct: 876 DPMLRRLDLGYALNAHMAQGMTQAQAI 902 >UniRef50_Q5WRX6 Putative uncharacterized protein n=1 Tax=Legionella pneumophila str. Lens RepID=Q5WRX6_LEGPL Length = 982 Score = 199 bits (506), Expect = 9e-49, Method: Compositional matrix adjust. Identities = 117/311 (37%), Positives = 173/311 (55%), Gaps = 10/311 (3%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRL 60 M+S+ ++SA A +YY+ NYY + +W G+G+++L L G V K+ LLEGRL Sbjct: 1 MLSVEPLKSAQGAADYYSKAFNYYSGDATAMQWLGQGSQKLKLSGVVQKEQMLALLEGRL 60 Query: 61 PDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEA- 119 PDG L Q+ HRPG+D+TFSAPKSVS++ LG L+ H++AV +RQ+E Sbjct: 61 PDGQVL---QNLEGEHRPGFDMTFSAPKSVSVLVGLGLAPELVRFHDEAVQLTIRQIEKE 117 Query: 120 LASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDK 179 A TRV G+ T NL++A F +SR +P LHTH V N+T H G+ ++LSSD Sbjct: 118 FAETRVSRRGEISFEKTNNLLVAAFRQPSSRANDPALHTHCVTMNITFHEGKARSLSSDP 177 Query: 180 VGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVEA---FSG 236 + G IE + N G +YR+ L +++ G+ + GK G++E+ GVP E FS Sbjct: 178 SREHGVIEQIQNNAHYCGLIYRQHLANKLKETGFHLRLTGK-GLFEIDGVPDEVLHEFST 236 Query: 237 RSQTIREAVGEDA--SLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDA 294 R I + E KS A + TRK+K+ D + +W Q K+ GFD +A+ Sbjct: 237 RRMDILGYMDEKGWNGAKSASTATVLTRKNKEEHDINLLTEDWKQRAKDIGFDAQAFMQH 296 Query: 295 ADQRADLRTLT 305 D+ + L+ Sbjct: 297 RDKSQSISWLS 307 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 119/548 (21%), Positives = 228/548 (41%), Gaps = 83/548 (15%) Query: 969 LTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHR 1028 +T+ Q+ + +++L + DR+ +QGYAGV KT+ ++S + E++ ++ G+ Sbjct: 448 MTNSQKESMKVLLTSKDRYLAIQGYAGVAKTS----MLSEARIFIEAQGHKLRGITVASS 503 Query: 1029 AVGEMR-SAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALI 1087 A E++ AG+ A +H + + +T + TLF++DE+SM+ + I Sbjct: 504 AAHELQEKAGIKADVFP-LVHQ---ELKEAQTASLTKTLFIIDEASMLSSHQGHELMKQI 559 Query: 1088 AAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPE-LREAVYSLINR 1146 G R V GD QL ++ G+ F L Q + A+M E+VRQ E LR+AV + Sbjct: 560 ERVGARLVLVGDRAQLPSVNAGRIFGLTQ-EYGIETAVMDEVVRQKNEILRQAVIATTKG 618 Query: 1147 DVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPM 1206 V+ AL L+ VK ++ AW H Sbjct: 619 FVQEALDNLD-VKTLATHKERIAWIANH-------------------------------- 645 Query: 1207 TLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNT 1266 + + AR++TL+ + +R + + I ++ G L EQ +L T Sbjct: 646 ---------WLSLSASARDETLLFAPTHANREEITTFIRSGLKQEGTLKGEQFSQIILKT 696 Query: 1267 ANIRDGELRRLSTWETHRDALVLVDN----------VYHRIAGISK---DDGLITLQDAE 1313 + + R ++ ++ + +V + Y+ + ISK D ++ L D Sbjct: 697 KMMEPIQSRFVAYYQ--KGDMVRFNQSFKRNKIHAGSYYTVGEISKKHRQDNVLPLIDES 754 Query: 1314 GN------TRLISPREAVA---EGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTV 1364 GN L + + A + +Y ++ + GD++ +T++ + T+ Sbjct: 755 GNLIKFNLNNLPNYKTHTAPFERTIEVYETKSLELLVGDKVMWTRNFKANDIRNGQCATL 814 Query: 1365 TAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRK 1424 + +S + A +H+D +Y +T + QG + I L E + Sbjct: 815 HEIKNNSFMFITKEGRLLTLEKSHPALKHLDYSYVLTNYKVQGKDAPYGIGL--MESFHR 872 Query: 1425 LMAGFESAYVALSRMKQHVQVYTDNRQGWTDAI-NNAVQKGTAHDVFEPKPDREVMNAER 1483 + + YV +SR + + TDN++ AI N+ +K + D+ ++++ ER Sbjct: 873 FGSTLNNFYVQISRAIHGMTLVTDNKEELVHAIRRNSNEKPASMDI---TSSAQLIHHER 929 Query: 1484 LFSTAREL 1491 F +L Sbjct: 930 RFGAQNQL 937 >UniRef50_Q2NBK6 TrwC protein n=7 Tax=Sphingomonadales RepID=Q2NBK6_ERYLH Length = 970 Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 130/312 (41%), Positives = 178/312 (57%), Gaps = 26/312 (8%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGE--RWAGRGAEQLGLQGSVDKDVFTRLLEG 58 M+S+A VRS +A +Y+ DNYY +W G GA +LGL G V+ VF LL+G Sbjct: 1 MLSVANVRSPSAAASYFAS-DNYYASADADRSGQWVGEGARRLGLDGKVEAAVFDALLQG 59 Query: 59 RLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVE 118 LPDG S + + HRPG DLTFS PKS S++A++G D+R+I A+ +AV A+ E Sbjct: 60 ELPDG---SSVGNPGQTHRPGTDLTFSVPKSWSLLALVGKDERIIAAYREAVLEALHWAE 116 Query: 119 A-LASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ-HNGEWKTLS 176 A TR++ G+ T TG+L + LF HDT+R+QEP LH HAV+ANVTQ +G+W+TL Sbjct: 117 KNAAETRMVEKGKIVTQATGSLAIGLFQHDTNRNQEPNLHFHAVIANVTQGKDGKWRTLK 176 Query: 177 SDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP---VEA 233 +D++ + N N IA R + VE LGYE KHG +E G+ V A Sbjct: 177 NDRLWQL----NTTLNSIAMAR-----FRVAVEKLGYEPGPTLKHGNFEARGITREQVMA 227 Query: 234 FSGRSQTIREAVGEDASLKSRDVAALDTRKSKQHV-DPEIKMAEWMQTLKETGFDIRAYR 292 FS R Q + +A L++ +AALDTR SK + D E W +T K G D+ Sbjct: 228 FSSRRQEVLDAR-RGPGLEAGRIAALDTRASKDTIEDRETLGKLWSETAKSIGLDLAPLV 286 Query: 293 DAADQRADLRTL 304 +RA +RTL Sbjct: 287 ----ERARIRTL 294 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 167/609 (27%), Positives = 253/609 (41%), Gaps = 89/609 (14%) Query: 875 VESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSR 934 + ++ AF L A F T ++ A ++ GDL+ V KG G L SR Sbjct: 355 LSQREAAFERTALYKAALDFGLPAT-IADIEKRTRALVRSGDLI---VGKGDHKGWLASR 410 Query: 935 ASYEAEKSILRHILEGKEAVMPLME------RVPGELME----KLTSGQRAATRMILETS 984 + AE+ IL + GK A +E RV M +L GQ A ++IL + Sbjct: 411 DAVIAEQRILSEVAAGKGASSSAVETGSATARVQAAAMAGQGFRLNEGQLGAAKLILTSE 470 Query: 985 DRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM-RSAGVDAQTL 1043 DR VQG AG GK++ + V +L RP V+GL + V + R G+ +QTL Sbjct: 471 DRTIAVQGIAGAGKSSVLKPV---AEVLRAEGRP-VIGLAIQNTLVQMLERDTGIASQTL 526 Query: 1044 ASFLHD-TQLQQRSGET-------PDFSNTLFLLDESSMVGNTDMARAYALI-AAGGGRA 1094 A FL +L G + + +LDE+SM+ N D + L AG R Sbjct: 527 ARFLGGWNKLLDDPGNAVLRLEAKAALKDHVLVLDEASMISNEDKEKLVRLANLAGVHRL 586 Query: 1095 VASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSG 1154 V GD QL A+ G+PF L Q A + + + P +REA + DV AL Sbjct: 587 VLMGDRKQLGAVDAGKPFALLQRTGMARAEMATNLRARDPVIREAQAAAQAGDVRTALRH 646 Query: 1155 LESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVR 1214 L+ H+ EAK A V ++ A+ + Sbjct: 647 LQ-----------------------PHTVEAKGDGAL------------VAADIWLALDK 671 Query: 1215 DYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGEL 1274 D RT I R +N+ I GE+G + + VL+ N EL Sbjct: 672 DDRARTS-------IYASGRAIRSAVNAAIQQGLLANGEIGPGKAELGVLDRVNTTREEL 724 Query: 1275 RRLSTWETHR--------DALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVA 1326 R LS ++ R AL L Y R+ G + + + D G P A Sbjct: 725 RHLSAYQPGRVLEVSRKQQALGLSAGEY-RVLGQDRKGRQVEVADKRGKRFRFDPARIRA 783 Query: 1327 ----EGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTL--SDGQQT 1380 + +TL+ P + + GDR+R+T++D RG V AV G VT S G Q Sbjct: 784 GKGDQNLTLHEPRKLEIHEGDRIRWTRNDHRRGLFNADQARVVAVVGGKVTFETSKGDQV 843 Query: 1381 REIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMK 1440 E++ + + IDLAYA+ AH AQG + IA+ + + ++ ++ V ++R++ Sbjct: 844 -ELKK-DDPMLKRIDLAYALNAHMAQGLTSDRGIAV--MDSRERNLSNQKTFLVTITRLR 899 Query: 1441 QHVQVYTDN 1449 H+ + D+ Sbjct: 900 DHLTLVVDS 908 >UniRef50_Q0HXX9 TrwC protein n=1 Tax=Shewanella sp. MR-7 RepID=Q0HXX9_SHESR Length = 1035 Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 138/389 (35%), Positives = 206/389 (52%), Gaps = 34/389 (8%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRL 60 MMS ++SA AG+Y+ +KD+YYV G W G GAE LGL G VD++ F LLEG+L Sbjct: 1 MMSPKAIKSASQAGHYF-EKDDYYVDGLSPSEWFGDGAETLGLSGDVDRETFKFLLEGQL 59 Query: 61 PDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEA- 119 PDG L ++DG +H+PG DLTF APKSVS+++ + GD+RL+ AH++AV +R +E Sbjct: 60 PDGQRLGTVRDGEWKHQPGIDLTFLAPKSVSILSEVVGDQRLLSAHDKAVQVVLRYIEQE 119 Query: 120 --LASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH-NGEWKTLS 176 + R + E T ++V A F H TSR +P LHTH VV N TQ +G W++ Sbjct: 120 YIVTRNRNRAENTVEYEKTASMVAATFKHTTSRAFDPLLHTHVVVMNATQRADGLWRS-- 177 Query: 177 SDKVGKTGFIEN--VYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVEA- 233 IEN ++ +Q G +YR+ L E+V++LGY+ + K G WE+ + E Sbjct: 178 ---------IENKPLFIDQKHLGLIYRQYLAEEVQSLGYDLD-HEKGGTWEIASISKEVI 227 Query: 234 --FSGRSQTIREAVG------EDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETG 285 FS RS+ I +A+ + A+ ++ A LDTR K H++ + +W + E Sbjct: 228 REFSKRSEAIEKALEARGKTRDSATAAEKETATLDTRDRKVHMERGELLEKWHAEIGEDK 287 Query: 286 F-DIRAYRDAADQRADLRTLTPGPAS--QDGPDVQQAVTQAIAGLSERKVQFTYTDVLAR 342 D++ + +A+L TL + + +AV AI L ER +T+ D L + Sbjct: 288 LNDLK--KVIRQSQANLPTLEMKTEALLERVKVANEAVMWAIEHLGERDTSWTHHD-LVK 344 Query: 343 TVGILPPENGVIERARAGIDEAISREQLI 371 ++ ID AI QLI Sbjct: 345 EASRYAGSRVLLSDVNNAIDAAIGSGQLI 373 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 116/419 (27%), Positives = 191/419 (45%), Gaps = 49/419 (11%) Query: 1066 LFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAI 1125 L+++DESSMVG M G R V +GD QL ++ G FR Q + Sbjct: 601 LWIVDESSMVGTKLMRDLLQRAGQSGARVVLTGDVRQLASVEAGAAFR-QLQNHGMETYH 659 Query: 1126 MKEIVRQTPE-LREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQE 1184 ++EIVRQT R+AVY + ++ ALS LE + G+ E SH + Sbjct: 660 LEEIVRQTNRGTRDAVYLSLMKNASHALSRLE---------ESGSTIKE----VVSHKKN 706 Query: 1185 AKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMI 1244 K+ + GEA + +V DY P+ R +++I+ E RR N ++ Sbjct: 707 GKIDHEK-----SGEARR-------QELVTDYMALAPQERAKSIILEPSREGRRRTNELV 754 Query: 1245 HDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALV--------LVDNVYHR 1296 + +K G LG E++ + L+ + + E R +++++ + + +Y++ Sbjct: 755 REALKKEGALG-EELRINQLSPVDATEAERRVVTSYQNGQIVRFARSFKREGIKKGLYYQ 813 Query: 1297 IAGISKDDGLITLQDAEGNTRLI--SPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRER 1354 + G +D L+ A LI SP A+ + ++ + G+ + + +D+ Sbjct: 814 VVGRDNNDILLKKFGANEQAELIRFSPERYAAKNIQMFNLTESGLAVGETIVWRDNDKPT 873 Query: 1355 GYVANSVWTVTAVSGDSVT--LSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQG--ASE 1410 G + N TV + G +VT LS G +T E + A H D YA+T H AQG A Sbjct: 874 GRLNNDTATVEKIEGTNVTFRLSSG-KTGEFDMSK-LANSHWDHGYAMTVHAAQGKTAQN 931 Query: 1411 TFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINN-AVQKGTAHD 1468 F A E +R+ + E YV +SR K V +YTD+++G A+ + QK TA + Sbjct: 932 VFVHA----ETSRESLLNTEQFYVQISRAKDRVYLYTDSKEGLVRAVEQRSGQKQTAKE 986 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 56/213 (26%), Positives = 93/213 (43%), Gaps = 41/213 (19%) Query: 864 AQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLL----- 918 A +A+ A+ + + +++ DL+ EA +A +++ I+A I G L+ Sbjct: 319 ANEAVMWAIEHLGERDTSWTHHDLVKEASRYAGSRVLLSDVNNAIDAAIGSGQLIDKSVR 378 Query: 919 --------YVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMER---------- 960 +DV +GY S+A+ + E +L+ G++ V L R Sbjct: 379 TFDKVSKREIDV-RGY-----TSKAAIDIEDEVLKEEYLGRDRVQALCSREQAAAAISNA 432 Query: 961 --VPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERP 1018 E + + QR AT IL + +R VQG+AG KTT S + + E+ R Sbjct: 433 EEKANEFGYEWNADQRKATEGILLSENRIIGVQGFAGTAKTT------SVLRTVAETARD 486 Query: 1019 ---RVVGLGPTHRAVGEM-RSAGVDAQTLASFL 1047 V GL PT+ A + AG+ + T+ SFL Sbjct: 487 MGYEVRGLTPTNSAGQSLIDGAGIQSGTIQSFL 519 >UniRef50_Q8RTD1 DNA helicase I (Fragment) n=4 Tax=Gammaproteobacteria RepID=Q8RTD1_ECOLX Length = 93 Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 90/93 (96%), Positives = 90/93 (96%) Query: 177 SDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVEAFSG 236 DKV KTGFI NVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVEAFSG Sbjct: 1 CDKVXKTGFIXNVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVEAFSG 60 Query: 237 RSQTIREAVGEDASLKSRDVAALDTRKSKQHVD 269 RSQTIREAVGEDASLKSRDVAALDTRKSKQHVD Sbjct: 61 RSQTIREAVGEDASLKSRDVAALDTRKSKQHVD 93 >UniRef50_B2JAG8 ATP-dependent exoDNAse (Exonuclease V) alpha subunit-helicase superfamily I member-like protein n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2JAG8_NOSP7 Length = 2142 Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 198/677 (29%), Positives = 311/677 (45%), Gaps = 95/677 (14%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVD-KDVFTRLLEGR 59 M++ A V S+ A NY+ NYY G W+G+GA +LGL G++D ++ F ++ GR Sbjct: 1 MLTAANV-SSEMAVNYFVK--NYYHQGK--SLWSGQGALKLGLSGAIDDEEAFKNVISGR 55 Query: 60 LPDGAD-LSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVE 118 P G + L+ + R D TFSAPKSVS+MA++GGD RLIDAH+QA+ + +E Sbjct: 56 SPQGREQLNARALKPDERRAALDCTFSAPKSVSLMALVGGDTRLIDAHHQALKETLELIE 115 Query: 119 A-LASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH-NGEWKTLS 176 A TRV + V TGNLV+A F+H SRD +P LHTH ++ N+TQ +G W +L Sbjct: 116 QRYAYTRVTDNSGRHRVKTGNLVVAQFDHIESRDLDPHLHTHCLLMNMTQTPDGRWLSLG 175 Query: 177 SDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP---VEA 233 +++ ++AN+ G Y+ L +V+ LGYE E KHG +++ G +EA Sbjct: 176 NNE---------IFANKKFLGMAYQSSLAREVQKLGYEIE-KSKHGQFDIKGFKFEDLEA 225 Query: 234 FSGRSQTIREAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRD 293 FS R Q I + +++ R+ +TR+ KQ + +A W + G IR + Sbjct: 226 FSKRRQQIIASFSANSTWAEREKIWDNTRQRKQKLPESELLAFWKEEAAALG--IR-FVK 282 Query: 294 AADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGV 353 A + R ++ PA++ + + + AIA SER V F D+ E + Sbjct: 283 AGEPRQEI------PANEKS--LAEVLDLAIAHCSERNVAFRQEDL----------EKFI 324 Query: 354 IERARA---GIDEAISRE--QLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNR---- 404 +E A A+ RE +LI L FT+ V EL+ + D+M+Q + Sbjct: 325 LEERLATDIAATAALIREHQELIALPGLTDQFTTMTAVRRELA----TIDLMQQGQYKFC 380 Query: 405 -------VTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAR 457 V H E ++ T G AV + A G G AG+ + EL +A Sbjct: 381 SISQREVVESHLENTLLNT-GQRQAVELAATTSDQFIAWQGVAG-AGKTFALKELKAIAF 438 Query: 458 EQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKE 517 G ++ A + + ++ + E I R + E P +VD+ LS K+ Sbjct: 439 NAGYTIKGFAPSSSAAKVLSEELEIQSETI-ARLLVTEPKEIEPNQIWVVDEAGLLSAKD 497 Query: 518 TLTLLDGAARHNVQV-LITDSGQRTGT--GSALMAMKDAGVNTY---------------- 558 LL A +V L+ D+ Q + G+ +++ AG+ T Sbjct: 498 AHALLQRATLLQARVILVGDTRQLSAVEAGNPFKSLQQAGIKTAHLNESLRQKNPQLKLA 557 Query: 559 -------RWQGGEQRPAT--IISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVR-EQA 608 R + G +R I + D + ++A D+ ++G E+ Sbjct: 558 VNLIADGRIEAGFERLEANGSILQVDSFSKIEQIANDYIVGTPEQRLKTLVLAGTNTERL 617 Query: 609 ILTQAIRSELKTQGVLG 625 LTQAIR +LK +G LG Sbjct: 618 ALTQAIRDKLKGEGTLG 634 Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 122/498 (24%), Positives = 212/498 (42%), Gaps = 90/498 (18%) Query: 969 LTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHR 1028 L +GQR A + TSD+F QG AG GKT + + + + + + G P+ Sbjct: 397 LNTGQRQAVELAATTSDQFIAWQGVAGAGKTFALKELKA----IAFNAGYTIKGFAPSSS 452 Query: 1029 AVGEM-RSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALI 1087 A + + ++T+A L + + P N ++++DE+ ++ D A+AL+ Sbjct: 453 AAKVLSEELEIQSETIARLL----VTEPKEIEP---NQIWVVDEAGLLSAKD---AHALL 502 Query: 1088 AAGG---GRAVASGDTDQLQAIAPGQPFR-LQQTRSAADVAIMKEIVRQ-TPELREAVYS 1142 R + GDT QL A+ G PF+ LQQ + A + E +RQ P+L+ AV Sbjct: 503 QRATLLQARVILVGDTRQLSAVEAGNPFKSLQQ--AGIKTAHLNESLRQKNPQLKLAVNL 560 Query: 1143 LINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFP 1202 + + +E LE+ ++L+ ++F Sbjct: 561 IADGRIEAGFERLEA----------------------------------NGSILQVDSFS 586 Query: 1203 DVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVP 1262 + E I DY TPE R +TL++ N +R L I D + G LG E + Sbjct: 587 KI-----EQIANDYIVGTPEQRLKTLVLAGTNTERLALTQAIRDKLKGEGTLG-ETATIT 640 Query: 1263 VLNTANIRDGELRRLSTWETHRDALV---------LVDNVYHRIAGISKDDGLITLQDAE 1313 L T N+ ++R +E D ++ L + + G + D +TL+ + Sbjct: 641 QLQTKNLTKVQMRFAHNFEIG-DVIMPTRDYKRRGLSKGKLYEVVGRTTDK--LTLRSDD 697 Query: 1314 GNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVT 1373 G + A +Y I + GDR+++ K+DR+ G +TVT + + V Sbjct: 698 GQHLEVD----TAFDKAVYQRHQIEIAVGDRLQWKKNDRQLGRRNGQEFTVTGIDLNIVH 753 Query: 1374 LSDG-QQTREIRPGQEQAEQHIDLAYAITAHGAQG-ASETFAIALEGTEGNRKLMAGFES 1431 + ++T I Q Q++D A T + +QG ++ I+ + T G ES Sbjct: 754 IKYADERTERISLAQ---TQNLDYALVSTTYSSQGKTADQVLISADFTIGQ-------ES 803 Query: 1432 AYVALSRMKQHVQVYTDN 1449 YVA SR + +++YT++ Sbjct: 804 FYVAASRARHELKIYTED 821 >UniRef50_B8GZQ5 DNA relaxase/conjugal transfer nickase-helicase trwC n=3 Tax=Alphaproteobacteria RepID=B8GZQ5_CAUCN Length = 936 Score = 187 bits (474), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 226/780 (28%), Positives = 323/780 (41%), Gaps = 94/780 (12%) Query: 17 YTDKDNYYVLGSMG-ERWAGRGAEQLGLQGSVDKDVFTRLLEGRLPDGADLSRMQDGSNR 75 Y + D+Y+ G RW G GA LGL+G VD + F +LL+G L D L +D + Sbjct: 39 YYEADDYHAEGGAAPSRWQGSGAAALGLEGEVDPERFRQLLDGVLSDHVALGARRDEGRQ 98 Query: 76 HRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEALASTRVMTDGQS-ETV 134 HRPG+DLT SAPKS+S+MA++ GD+RL AH AV+ A+ E A + DG+ V Sbjct: 99 HRPGWDLTLSAPKSISIMALVAGDRRLHAAHAAAVEAALAFTERHAGGTRIRDGERVAHV 158 Query: 135 LTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH-NGEWKTLSSDKVGKTGFIENVYANQ 193 TG L MA F H+TSR Q+PQLHTHAV+ N+T+ G W++L S +Y Q Sbjct: 159 RTGALAMATFQHETSRAQDPQLHTHAVILNMTRDLEGTWRSLDS---------RALYQLQ 209 Query: 194 IAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPV---EAFSGRSQTIREAVGED-- 248 G +YR++L V ALGY E VGK M+E+ VP EAFS R++ + + Sbjct: 210 KTIGEVYRQELAGAVRALGYAIE-VGKESMFEISDVPASVREAFSERARQVEAHLATKGL 268 Query: 249 ----ASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTL 304 A+ + + A L TR SK+ D W GF A R + D Sbjct: 269 TRATATAEEKQAATLYTRASKKAADRAELSRAWRVEADGLGFSSEARRSLLTEALDRAEA 328 Query: 305 TPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEA 364 + + Q AV A L ER+ F+ + L R G A +D+ Sbjct: 329 SKAIRDRGAVLAQDAVRFAAEKLGERQAIFSRAE-LEREAGRKAIGLATRTEIMAAVDKR 387 Query: 365 ISREQL--------IPLDREKGLFTSGIHVLDELSVRALSRD-----------IMKQNRV 405 QL I LD E FT+ + E + + R+ I + Sbjct: 388 QQSHQLEARALRSPIGLDLEG--FTTDRAIAHEKRLLEIEREGRNALAPIVPPIEASRII 445 Query: 406 TVHPEKSVPRTAGYSD----AVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGR 461 + R +SD A + R ++ V G G A +A L A EQG Sbjct: 446 NAASLAASERGLAWSDDQRRATKAVLTSRSAVVGVQGFAGTAKTTTVLATLAKAAAEQGY 505 Query: 462 EVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGS--TVIVDQGEKLSLKETL 519 +V+ +A + + + + L G I R L+E P + IVD+ +S ++ Sbjct: 506 QVKALAPSASAAITLGEALDLEGRTIA--RHLVERPNARPSARELWIVDEASLVSARDMA 563 Query: 520 TLLDGAARHNVQVLITDSGQRTGT---GSALMAMKDAGVNTYRWQ--------------- 561 LLD A R + L+ + G+ G+A ++DAG+ T Sbjct: 564 RLLDEAQRRGARTLLVGDAHQLGSVGAGAAFRQLQDAGLETAHLTKIVRQSNTLTLEAVE 623 Query: 562 ---GGEQRPA---------TIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVRE-QA 608 G R A II R A +A FA A + RE + Sbjct: 624 ATLAGHARRAFDALDRGGGQIIEAQSVEDRQALIAAHFAQLDSAQRRRTLIIDPSREGRE 683 Query: 609 ILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPET----R 664 LT IR+EL G LG VT+T+L L R Y PG ++ T Sbjct: 684 QLTARIRAELIAAGHLGKAAVTVTSLVAKDLTQAERKEAGSYAPGDIVTFARTLTGKAVA 743 Query: 665 SHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSW---SLFRPEKMPVADGERLRVT 721 Y + V A+ ++TL D + RI W F P + G+R+ T Sbjct: 744 KDTAYEVQAVDARRRTVTLSDGRD----ARIDWAPHRWGSAEAFEPVDRELRQGDRIEFT 799 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 128/545 (23%), Positives = 208/545 (38%), Gaps = 95/545 (17%) Query: 940 EKSILRHILEGKEAVMPLMERVPGELMEKLTS------------GQRAATRMILETSDRF 987 EK +L EG+ A+ P++ + + S QR AT+ +L + Sbjct: 418 EKRLLEIEREGRNALAPIVPPIEASRIINAASLAASERGLAWSDDQRRATKAVLTSRSAV 477 Query: 988 TVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA-GVDAQTLASF 1046 VQG+AG KTT V++ + + +V L P+ A + A ++ +T+A Sbjct: 478 VGVQGFAGTAKTT---TVLATLAKAAAEQGYQVKALAPSASAAITLGEALDLEGRTIAR- 533 Query: 1047 LHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAI 1106 L +R P + L+++DE+S+V DMAR G R + GD QL ++ Sbjct: 534 ----HLVERPNARPS-ARELWIVDEASLVSARDMARLLDEAQRRGARTLLVGDAHQLGSV 588 Query: 1107 APGQPFRLQQTRSAADVAIMKEIVRQTPELR-EAVYSLINRDVERALSGLESVKPSQVPR 1165 G FR Q + + A + +IVRQ+ L EAV + + RA L+ R Sbjct: 589 GAGAAFRQLQD-AGLETAHLTKIVRQSNTLTLEAVEATLAGHARRAFDALD--------R 639 Query: 1166 QEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEA-R 1224 G SV + +A++ + + A R Sbjct: 640 GGGQIIEAQSVED------------------------------RQALIAAHFAQLDSAQR 669 Query: 1225 EQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTW---- 1280 +TLI+ E R L + I AG LGK V V L ++ E + ++ Sbjct: 670 RRTLIIDPSREGREQLTARIRAELIAAGHLGKAAVTVTSLVAKDLTQAERKEAGSYAPGD 729 Query: 1281 -----ETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISP-REAVAEGVTLYTP 1334 T V D Y + + +TL D +P R AE + P Sbjct: 730 IVTFARTLTGKAVAKDTAYE-VQAVDARRRTVTLSDGRDARIDWAPHRWGSAEA---FEP 785 Query: 1335 DTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQA---- 1390 + GDR+ FT+++ + V + G+ V+L + ++R + Sbjct: 786 VDRELRQGDRIEFTRNN-------MRLHQVNGLQGEIVSLDVEARKAQVRTDRGHIRTLD 838 Query: 1391 -----EQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQV 1445 ++H AY TA AQG T L E R + + YVA+SR + + Sbjct: 839 LNALQDRHFRHAYVQTAFAAQG--RTTDHVLFHAESQRSNLIDQATLYVAISRARHGATI 896 Query: 1446 YTDNR 1450 TD+R Sbjct: 897 VTDDR 901 >UniRef50_B0RKM2 Mobilization protein TraI n=3 Tax=Yersinia RepID=B0RKM2_YEREN Length = 1656 Score = 187 bits (474), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 114/302 (37%), Positives = 166/302 (54%), Gaps = 20/302 (6%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYV--LGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEG 58 M+S+ ++ + AGNYY D+YY G + W G+GAE+LGL G+VD D F LLEG Sbjct: 1 MLSLKKIGNVKEAGNYYLSHDSYYNKDTGEVHSEWGGKGAEELGLSGAVDTDRFIELLEG 60 Query: 59 RLPDGADLSRMQ-DGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQV 117 ++ L R + +G H PG+D TFSAPK S++A++G DKRLI AH ++V A++ + Sbjct: 61 KIKADIQLGRTKVNGDLEHVPGWDFTFSAPKGASILALVGDDKRLIQAHQESVIEAMKFL 120 Query: 118 EA-LASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVAN-VTQHNGEWKTL 175 E A+TR DG++ NL+ A F H SR +PQLHTH V N V G+WK+L Sbjct: 121 EKNYAATRTYKDGKTHLEKVDNLLYASFIHTESRSHDPQLHTHNPVINAVLDSEGKWKSL 180 Query: 176 SSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKH-GMWEMPGVP---V 231 +E +Y ++ G +YR + LGYE EV + G +++ G+P Sbjct: 181 EP--------VE-MYRAKMMAGLVYRSSYASKARGLGYEIEVTDREKGFFDIKGIPDPLK 231 Query: 232 EAFSGRSQTIREAVGEDASL--KSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIR 289 +FS R Q I+ A+ + KS + A L TR K + E + W T+ E+GFDI Sbjct: 232 GSFSKRRQQIQAAINQRGLFDQKSIEKATLFTRDKKTSIAQEERNEIWKTTVTESGFDID 291 Query: 290 AY 291 + Sbjct: 292 LF 293 Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 162/686 (23%), Positives = 280/686 (40%), Gaps = 116/686 (16%) Query: 868 IHLALPVVESKKLAFSMVDLLTEAKSF--AAEGTGFTELGGEINAQIKRGDLLYVDVAKG 925 + LA V+ + FS LL EA E + ++ +I+ I G+L + G Sbjct: 388 VRLAYKVLAENESVFSYKALLKEAMKLRLGLENSSKADIDLDIDRLIDVGEL--IPRKTG 445 Query: 926 YGTGLLVSRASYEAEKSILRHILEGKEAVMPL------------MERVPGELM-EKLT-- 970 + T +SR E+ I+ +L GK+ + E+ EL+ +K T Sbjct: 446 FTTKEALSR-----ERFIVTTMLNGKDTYQAIGDLKGVKTHIDAFEQRQTELLGQKFTFS 500 Query: 971 SGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAV 1030 QR A + +L + D + +QGYAG GKTT ++S V ++ + GL PT AV Sbjct: 501 DDQRQAIQDMLLSKDLVSGIQGYAGTGKTT----LLSCVIEYATNQGYIIKGLAPTGSAV 556 Query: 1031 GEM-RSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAA 1089 + + G+ T+ S+L R E + S + L+DE S++ + Sbjct: 557 ETLHKDTGIVTSTVDSYLF-----TRKPEDIE-SKQIILVDEGSLLNAKHVQDLLIAAKN 610 Query: 1090 GGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQ-TPELREAVYSLINRDV 1148 G + GD DQ A+ G+PF + Q VA +K I+RQ EL AV IN + Sbjct: 611 SGAKLFLLGDKDQHAAVEAGKPFIIMQA-FGMQVASVKTIIRQKNEELLNAVKDAINNNF 669 Query: 1149 ERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTL 1208 +L+ W M K + P+ Sbjct: 670 SESLN----------------W------------------------MGKNVDVDENPLG- 688 Query: 1209 YEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVL---- 1264 + ++ T E R +TL++ N+ RR NS I ++ G + K+++ VL Sbjct: 689 --KMATEWLSLTSEERGKTLVIIPENKTRRKYNSTIRRELQEEGVVSKDEISTRVLLNSR 746 Query: 1265 -NTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPRE 1323 N A +RD + + + +++I + D +T+ + + P E Sbjct: 747 MNHAKMRDTRYYKTEHLIEFQKETQGIKPGFYKITLFNHLDNELTISSDNKDVHVFRPGE 806 Query: 1324 AVAEG---VTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTL-----S 1375 + + ++ + +++ GD++++TKS + G + V + T + Sbjct: 807 LDEKDRYQLDVFEEENLKISKGDKLQWTKSRKGLGLKNGDMLEVISTDSSKGTYQAIREN 866 Query: 1376 DGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVA 1435 DG Q E+ Q ++D +Y++T++ AQG + AL N+ + +S YV+ Sbjct: 867 DG-QIFELDANQ---RLNVDYSYSLTSYKAQGKTCDRVYALLVASKNK--LVNNKSFYVS 920 Query: 1436 LSRMKQHVQVYTDNRQGWTDAINNA-VQKGTAHDVFE--------------PKPDREVMN 1480 +SR K +++TDN+ DAIN K TA + F PK +R++ Sbjct: 921 ISRAKHIAKIFTDNKAKLLDAINKKDSDKTTALEGFSTGQMKREANDEKNIPKDNRKLHQ 980 Query: 1481 AERLFSTARELRDVAAGRAVLRQAGL 1506 A TA E ++A +AV L Sbjct: 981 AIMEVKTASE--KLSAKQAVFSHTDL 1004 >UniRef50_A5VG54 Conjugative relaxase region-like protein n=2 Tax=Sphingomonas wittichii RW1 RepID=A5VG54_SPHWW Length = 1014 Score = 186 bits (473), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 118/306 (38%), Positives = 175/306 (57%), Gaps = 32/306 (10%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGE--RWAGRGAEQLGLQGSVDKDVFTRLLEG 58 M+S+A VRSA A NY+ KD+YY + E W G GAE +GL G V KD F +L G Sbjct: 1 MLSVAGVRSASGAANYFA-KDDYYTVEGSSEISAWGGEGAEAIGLSGEVSKDAFEGVLNG 59 Query: 59 RLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVE 118 LP G ++++++ R GYDLTFS PKS S+MA + GDKR++DA+ AV + VE Sbjct: 60 ILPSGEAVAQVEN----RRAGYDLTFSMPKSASVMAYVAGDKRVLDANMAAVKATMAWVE 115 Query: 119 A-LASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH-NGEWKTLS 176 LA R +G+ V TGNLV ALF HDTSR +PQ H HAV+AN+T+ +G+W+ L Sbjct: 116 KNLAEGRRDIEGRKVPVQTGNLVYALFQHDTSRALDPQAHIHAVIANLTRMPDGKWQALH 175 Query: 177 SDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVEAFSG 236 +DK ++++ G +Y L+ +E +GY+ ++ GKHG +E+ GVP +A G Sbjct: 176 ADK---------LWSHNSIIGSIYHAFLRAGLERIGYQVDLKGKHGTFEIAGVP-KAVIG 225 Query: 237 RSQTIREAVGEDAS---LKSRDVAALDTRKSKQHVDPEIKMAE-------WMQTLKETGF 286 RE + + A+ +KS + T++S+ DP++ + + W+ GF Sbjct: 226 EFSQRREEILDHATRLGIKSPEGLREITKRSR---DPKLDVEDRAALKQGWIDQAAAHGF 282 Query: 287 DIRAYR 292 D + R Sbjct: 283 DGKDLR 288 Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 137/554 (24%), Positives = 230/554 (41%), Gaps = 88/554 (15%) Query: 930 LLVSRASYEAEKSILRHILEGKEAVMPLM------ERVPGELMEKLTSGQRAATRMILET 983 ++ ++ + E+ IL + EGK P++ +R+ L GQ AA MIL + Sbjct: 416 MVTTQEALRTEEKILAAVEEGKGKSEPIVAAADAPQRLQDAAERPLNPGQLAAATMILSS 475 Query: 984 SDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM-RSAGVDAQT 1042 +DR VQG AG GK+T ++ AV + E E R+ GL ++ V ++ AG+ AQT Sbjct: 476 ADRTVSVQGAAGTGKST----MLQAVARVAEEEGARITGLAFQNKMVADLAEGAGIKAQT 531 Query: 1043 LASFL---------HDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAA-GGG 1092 +ASF+ DT + + E + T+ L+DE+SMV + +M + + + AA G Sbjct: 532 IASFVLANERFVTERDTLGYEAAREK--LAGTMLLVDETSMVSSNEMLKLHQITAALGVD 589 Query: 1093 RAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERAL 1152 + V GD QL +I G+ F + Q +A M + +RQ + V +L N + +A Sbjct: 590 KLVLVGDRQQLSSIDAGKAFAMIQA-GGGTMARMDQNIRQRTDQLRTVAALAN--IGKAG 646 Query: 1153 SGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAI 1212 + L+ + V E A A E S Sbjct: 647 AALKVLGDRVVEAGEPAAAAADMWLELS-------------------------------- 674 Query: 1213 VRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDG 1272 P RE T + + R V+N I D G + + + + V N Sbjct: 675 --------PGEREATAVFASGRDARAVINQRIQDGLIAEGSVKGQAIHLTVFERVNTTRE 726 Query: 1273 ELRRLSTW------ETHRDALVLVDNVYHRIAGIS-KDDGLITLQDAEGNTRL----ISP 1321 ELR ST+ E R V R + +G + L D R +SP Sbjct: 727 ELRYASTYRQGQTLEVGRGGAQDVGIKAGRYDVLKVHANGKVELSDGRRRIRFDPQKLSP 786 Query: 1322 REAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTR 1381 E + + L +++ GDR+R+T +D++RG ++ V V D V + + Sbjct: 787 TEQ-RDRLQLSEKKDLQLREGDRIRWTANDKQRGLHNAALARVVGVDADGVKVETADKVL 845 Query: 1382 EIRPGQEQAEQHIDLAYAITAHGAQGASETFAIAL----EGTEGNRKLMAGFESAYVALS 1437 + +DLAY++ H AQG + AI + E N++L V ++ Sbjct: 846 LTLSLGDPMLSRLDLAYSLNMHMAQGITTDKAITVMSSHERNLSNQRLF------NVGVT 899 Query: 1438 RMKQHVQVYTDNRQ 1451 R++ + + D+++ Sbjct: 900 RVRDELTMVVDDKE 913 >UniRef50_A4LST4 TrwC protein n=10 Tax=Proteobacteria RepID=A4LST4_BURPS Length = 991 Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 109/287 (37%), Positives = 166/287 (57%), Gaps = 21/287 (7%) Query: 12 SAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRLPDGADLSRMQD 71 +A +Y++ D+YY + GE W G GA+ LGL G V++ +RLL+G+LP+G + D Sbjct: 14 AAAHYFSAADDYYAKENPGE-WQGDGAQALGLAGPVEQVQLSRLLDGQLPNGERIQTTFD 72 Query: 72 GS-NRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEALASTRVMTDGQ 130 + N+ R G DLTFSAPKSVSM A++ GDK + AH++AV A+ QVE LA R G+ Sbjct: 73 PTDNKKRMGLDLTFSAPKSVSMQALVAGDKDVTAAHDRAVTRALEQVEQLAEARKKVKGK 132 Query: 131 SETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH-NGEWKTLSSDKVGKTGFIENV 189 S TGN+V+ F H+ SR ++PQLHTH+VV N+T+ +G W+ LS+ E++ Sbjct: 133 SYRERTGNMVIGKFRHEMSRAKDPQLHTHSVVLNMTRRADGMWRALSN---------EDI 183 Query: 190 YANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP---VEAFSGRSQTIREAVG 246 + + Y+ +L ++ LGY+ VV G +E+ + +EAFS RS+ I EA+ Sbjct: 184 FRAKKTIDATYQAELARGLQELGYQIRVVDDRGNFELAHISRDQIEAFSARSRVIEEALA 243 Query: 247 EDASLKS------RDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFD 287 + ++ + V +L TR K D EI W++ +E G D Sbjct: 244 NEGKTRATATTLEKQVISLATRPRKDESDREIVKQYWVEKSRELGID 290 Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 170/601 (28%), Positives = 265/601 (44%), Gaps = 99/601 (16%) Query: 892 KSFAAEGTGFTELGGE--INAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILE 949 + F E G+TE + IKRG L V K Y T ++R EK+IL Sbjct: 411 ECFLRELKGWTEKEAHTYVGHAIKRGSL--VPAEKRYTTQKALAR-----EKAILAIERT 463 Query: 950 GKEAVMPLMERVPGELM---EKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVM 1006 G+ AV P++ + L +GQR+A I+ TS+RF +QG AG GKT V Sbjct: 464 GRGAVAPILTAAAVKTALESSTLNAGQRSAVETIVATSNRFVGIQGDAGTGKTY---TVN 520 Query: 1007 SAVNMLPE----SERPRVVGLGPTHRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDF 1062 AV ++ + SE R V L P V +++ G++A TLASFL R+ + P Sbjct: 521 QAVALIKQASAVSEGYRTVALAPYGNQVKALKNEGLEAHTLASFL-------RTKDKPID 573 Query: 1063 SNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPF-RLQQTRSAA 1121 T+ +LDES +VG M + + G R V GDT Q +AI G+PF +LQ Sbjct: 574 GKTIIVLDESGVVGARQMEQLMRTVEKAGARMVMIGDTKQTEAIEAGKPFAQLQH----- 628 Query: 1122 DVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSV-TEFS 1180 G+++ + S++ RQ+ +H + T Sbjct: 629 -------------------------------DGMQTARISEIQRQK-----DHELKTAVE 652 Query: 1181 HSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVL 1240 H+ E ++ Q A LK P+ + AIV DY G T R TLIV NE RR + Sbjct: 653 HAAEGRV--TQSLAHLKHVEELKEPIERHRAIVNDYIGLTETDRRDTLIVAGTNEARREI 710 Query: 1241 NSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGI 1300 N M+ + E AG G+E L ++ + RR + +++ +V+ ++ AG+ Sbjct: 711 NRMVRESLELAGN-GRE---FETLTRVDMTQAQ-RRFAP--SYQPGMVIQPEKDYQKAGL 763 Query: 1301 SKDD----------GLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKS 1350 ++ + + L+ +G T I+PR+A +++Y + + GD +R ++ Sbjct: 764 TRGETYRVKEALPGNALVLERQDGTTATINPRKATQ--LSVYHLERAELSVGDTVRINRN 821 Query: 1351 DRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQ-----EQAEQHIDLAYAITAHGA 1405 D R V V G V L +Q R+ RP + H++ AYA T H + Sbjct: 822 DPGRDLTNGDRMRVAGVIGGVVKLESVEQ-RDGRPVRALELPTNRPLHLEYAYASTVHSS 880 Query: 1406 QGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGT 1465 QG + A+ T+ M + YVA+SR + +VYT++ + AI K T Sbjct: 881 QGLTNDRALIALDTKSRTTSMNLY---YVAISRARYEARVYTNSVKELPAAIARRFDKTT 937 Query: 1466 A 1466 A Sbjct: 938 A 938 >UniRef50_Q3SHW0 TrwC protein n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SHW0_THIDA Length = 929 Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 149/462 (32%), Positives = 234/462 (50%), Gaps = 56/462 (12%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYV-LGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGR 59 + +++ +++AG A YY D+YY G W G+GAE LGL+G V +L G Sbjct: 2 VCTVSAIKTAGVAAEYYAQTDDYYRDRGHAPTAWQGKGAEALGLRGEVTPAQAEAILNGI 61 Query: 60 LPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVE- 118 LP+G + G HRPG+D TFSAPKSVS+ A + GD RLI AH++AV+ A++ +E Sbjct: 62 LPNGERV-----GGGDHRPGWDATFSAPKSVSVAAYVRGDDRLIAAHDRAVNAAIQYLER 116 Query: 119 ALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH-NGEWKTLSS 177 +A+TR+ +G+ T TGNLV A + HD SR+ EP LHTH+V+AN+TQ +G+W++L S Sbjct: 117 EVAATRIREEGEVRTEATGNLVAATYRHDVSREGEPDLHTHSVIANITQSADGQWRSLES 176 Query: 178 DKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVV--GKHGMWEMPGVPV---E 232 +Y Q G +YR L + E LGY TE G+H +E+ V + Sbjct: 177 ---------RPLYRLQTDAGAVYRAALARECERLGYATERTRAGEHPSFELRQVSQAERD 227 Query: 233 AFSGRSQTIREAVG------EDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGF 286 +S RS+ + + E A+ + + AAL TR++K ++ + ++ W + ++ G Sbjct: 228 MWSTRSRQVEAELAKMGLSRETATAEQKQAAALATRQAKGNIGRDNLLSNWREQSRQAGH 287 Query: 287 DIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVL--ARTV 344 ++ A A Q D A + + AV QA+ LSER+ ++T ++ AR + Sbjct: 288 EMPALPQA--QEID--------AGEYRRRAEAAVRQAVEHLSERESRYTERQIVTEARKL 337 Query: 345 GILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSR---DIMK 401 G+ GID+ R + L R L + D ++ + L + + Sbjct: 338 GM------------GGIDDQDIRAAVADLHRRGELVETQTRQHDAITGQRLEQAGYTTRE 385 Query: 402 QNRVTVHPEKSVPRTAG-YSDAVSVLAQDRPSLAIVSGQGGA 442 R+ H + R AG A+S+ A D A V+ G A Sbjct: 386 AQRIERHMLDTASRAAGAIKPAMSIEAADAAISAQVAKTGHA 427 Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 165/624 (26%), Positives = 272/624 (43%), Gaps = 111/624 (17%) Query: 864 AQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVA 923 A+ A+ A+ + ++ ++ ++TEA+ G ++ + +RG+L+ Sbjct: 307 AEAAVRQAVEHLSERESRYTERQIVTEARKLGMGGIDDQDIRAAVADLHRRGELVETQTR 366 Query: 924 KGYG-TGLLVSRASY---EAEKSILRHILEGKE----AVMPLME------RVPGELMEK- 968 + TG + +A Y EA++ I RH+L+ A+ P M + ++ + Sbjct: 367 QHDAITGQRLEQAGYTTREAQR-IERHMLDTASRAAGAIKPAMSIEAADAAISAQVAKTG 425 Query: 969 --LTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPT 1026 + Q AT+ +L +DR T+VQGYAG KTT AV SA + + V+ L PT Sbjct: 426 HAFNTAQVEATKALLTGTDRITLVQGYAGTAKTTSVLAVSSAA---LQQQGYGVIALAPT 482 Query: 1027 HRAVGEMRSA-GVDAQTLASFLHDTQLQQRSGETPDFSNT--LFLLDESSMVGNTDMARA 1083 H + + A G ++QT+A FL+ P+ S+ ++++DE+SM+ DM + Sbjct: 483 HSSAKTLGDAIGAESQTVAKFLN---------SRPEVSSQPRIYMVDEASMLSARDMDK- 532 Query: 1084 YALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQ-TPELREAVYS 1142 L GGR V GD QL ++ G FR QT ++ IVRQ + ELR AVY Sbjct: 533 -LLSRTQGGRVVMVGDVKQLGSVEAGAAFRQLQTDGDLKTQVLDYIVRQRSDELRAAVYD 591 Query: 1143 LINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFP 1202 I DV+ ALS ++ V E ++E+++ Sbjct: 592 AIRGDVQSALSKID-------------------VRELD-TRESRVG-------------- 617 Query: 1203 DVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVP 1262 AI DY G + + R++T+I+ +DRR +N + + GELG V + Sbjct: 618 --------AIAADYAGMSRDDRDRTIIIAPGRDDRRQINDAVREQLAARGELGGS-VTIQ 668 Query: 1263 VLNTANIRDGELRRLSTW------ETHRD--ALVLVDNVYHRIAGISKDDGLITLQDAEG 1314 L++ ++ E RR ++ + RD +L L + R+ + D ITL+ G Sbjct: 669 ALDSRDMTAVESRRAGSYAVGHQVQAGRDYASLGLKRGDFARVVAVDVDCNRITLETVTG 728 Query: 1315 NTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVT- 1373 + + I P + + + V GD++ N V T T +G +T Sbjct: 729 HQKEIDPSRVTK--LAAFEQRDMAVAVGDKL------------VNRVNTQTLKNGTPLTV 774 Query: 1374 --LSDGQQTREIRPGQEQ-----AEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLM 1426 +++GQ G+ A +D YA T H +QG T L E R + Sbjct: 775 EKIAEGQIHVRDAAGKLHRLDAGAMHRLDHGYAQTGHESQG--RTCTRVLIHAESARTNL 832 Query: 1427 AGFESAYVALSRMKQHVQVYTDNR 1450 ++ YVALSR +VYTDNR Sbjct: 833 QTQQNMYVALSRATDDARVYTDNR 856 >UniRef50_Q5ZTT4 TraI n=1 Tax=Legionella pneumophila subsp. pneumophila str. Philadelphia 1 RepID=Q5ZTT4_LEGPH Length = 1981 Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 126/392 (32%), Positives = 203/392 (51%), Gaps = 26/392 (6%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQG-SVDKDVFTRLLEGR 59 M+S+ + SA A YY D NYY S RW G GA+ LG+ G +V+K+ LL+G Sbjct: 1 MLSLQPLDSADGAAAYYLDVVNYYENDSKSVRWLGDGAKILGIHGQAVEKEQMIALLKGI 60 Query: 60 LPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEA 119 LPDG L R+ HRPG+D+T +APKS S++ G D RL + ++AV++ V ++E Sbjct: 61 LPDGTQLGRIDKDGIHHRPGFDMTLTAPKSFSILLESGADPRLGEVFDKAVEWFVEEMEK 120 Query: 120 -LASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH-NGEWKTLSS 177 A R + DG+ E + T NLV+A F +SR +P HTH VV N+T +G+W++L+S Sbjct: 121 EFAQARQLVDGKIEYIDTRNLVIAAFRQPSSRANDPNSHTHLVVQNMTHCPDGKWRSLAS 180 Query: 178 DKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP---VEAF 234 D G+ G +E + + I G +R KL + LGY+ G G+WE+ G P + F Sbjct: 181 DMDGQKGVVEQIMKHHIYGGLKFRNKLANLTKELGYQLASDGD-GLWEIQGAPEQVLTHF 239 Query: 235 SGRSQTIREAVGED--ASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFD----- 287 S R ++I + E + K+ +AA T+ K+ +D E + ++ +E GFD Sbjct: 240 SKRRESIEALLDEKGWSGAKASSIAAQKTKLDKEIIDYEKWKEDIIKECQEMGFDPHQLV 299 Query: 288 IRAYRDAADQRADLRTLTP-------GPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVL 340 +Y+ Q+ +TL G + + +++V AI +S++ F ++ Sbjct: 300 ASSYK---PQKNLFQTLKENIVERFYGKDNIEMTHARESVYVAIESISQQHAVFEERELK 356 Query: 341 ARTVGILPPENGVIERA--RAGIDEAISREQL 370 + + N +I+ IDE I+ + L Sbjct: 357 KEALKYVIASNKIIDETLINKAIDENIANQNL 388 Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 113/536 (21%), Positives = 218/536 (40%), Gaps = 79/536 (14%) Query: 950 GKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAV 1009 K+ V ++ E+ L+ Q+ A L ++DRF +QGYAG GKTT R Sbjct: 429 SKQKVSEFIKAKEQEMAFALSPSQKKAMTTFLTSTDRFIAIQGYAGTGKTTMLRLTRELA 488 Query: 1010 NMLPESERPRVVGLGPTHRAVGEMR-SAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFL 1068 ++ + + G+ A E+R G++A T A L Q Q++ D S T+F+ Sbjct: 489 SL----QGYEIRGITAGSAAANELRHKGGLNASTFARELGRLQNQKQ-----DLSKTIFV 539 Query: 1069 LDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKE 1128 +DE+SM+ N + L + GD QL + + G+ F + Q VA+ Sbjct: 540 VDEASMLSNPQGHKIIKLAEQFNTQLKIIGDKAQLPSPSSGKLFSVIQDYGIKTVAMTDN 599 Query: 1129 IVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLA 1188 + ++ ELRE+ ++ A+ L V+ Sbjct: 600 LRQKDSELRESAIHAGRGEIYDAVDKLTHVET---------------------------- 631 Query: 1189 EAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVR 1248 D + + I + TPE R+ TL + +R+ + ++ + Sbjct: 632 -------------LDTYLKRVDYISSKWLSLTPEERQNTLCFAPTHRNRQDITQILRNAL 678 Query: 1249 EKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNV--YHRIAGISKDDGL 1306 + G L ++ + P+L N+ +LR + + + D + + Y+ AG G Sbjct: 679 IQEGTLTGQEHLQPILKERNLTGIKLRN-AAYYSQNDIIRFNHTIQRYNIKAGDYLTVGQ 737 Query: 1307 ITLQDAEGNT-------------RLISPREAVAEG------VTLYTPDTIRVGTGDRMRF 1347 +T ++ NT +L S E E V +Y + + + GD++++ Sbjct: 738 VTNKNKHNNTLILKHENGQAIKFKLSSLPEFRTENKDLERPVEVYRREQLSLMAGDQIQW 797 Query: 1348 TKSDRERGYVANSVWTVTAVSGDSVT-LSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQ 1406 ++ G + + T+ ++ + +T +++ QT + G ++ +H+D Y +T + Q Sbjct: 798 KRNSEHNGIRNSELATIRQINNEGITIITEDNQTLHLPHGAKEL-RHLDHGYVLTTYATQ 856 Query: 1407 GASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAI--NNA 1460 G + + L E + + ++ YV +R + V TD++ AI NN+ Sbjct: 857 GKDKKRGLGL--IESQNRFASTIQNYYVETTRGIWEMIVVTDDKDHLVKAITTNNS 910 >UniRef50_Q2NKF7 TrwC protein n=6 Tax=Proteobacteria RepID=Q2NKF7_ECOLX Length = 966 Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 114/293 (38%), Positives = 165/293 (56%), Gaps = 28/293 (9%) Query: 11 GSAGNYYTD-KDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRLPDGADLSR- 68 G A +YY D D+YY W G+GAE+LGL G VD F LL G + +G + R Sbjct: 13 GRAASYYEDGADDYYAKDGDASEWQGKGAEELGLSGEVDSKRFRELLAGNIGEGHRIMRS 72 Query: 69 --MQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEALASTRVM 126 QD ++ R G DLTFSAPKSVS+ A++ GD +I AH++AV + Q EA A R Sbjct: 73 ATRQD--SKERIGLDLTFSAPKSVSLQALVAGDAEIIKAHDRAVARTLEQAEARAQARQK 130 Query: 127 TDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH-NGEWKTLSSDK-VGKTG 184 G++ TGNLV+ F H+TSR+++PQLHTHAV+ N+T+ +G+W+ L +D+ V +T Sbjct: 131 IQGKTRIETTGNLVIGKFRHETSRERDPQLHTHAVILNMTKRSDGQWRALKNDEIVKRTR 190 Query: 185 FIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGV---PVEAFSGRSQTI 241 ++ G +Y +L +++ LGY+ GK G +++ + +E FS R++ I Sbjct: 191 YL----------GAVYNAELAHELQKLGYQLR-YGKDGNFDLAHIDRQQIEGFSKRTEQI 239 Query: 242 RE---AVGED---ASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDI 288 E A G D SL+ + A + +R K VD E AEW T KE G D Sbjct: 240 AEWYAARGLDPNSVSLEQKQAAKVLSRAKKTSVDREALRAEWQATAKELGIDF 292 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 152/552 (27%), Positives = 233/552 (42%), Gaps = 81/552 (14%) Query: 932 VSRASYEAEKSILRHILEGKEAVMPLMERVPGELME---KLTSGQRAATRMILETSDRFT 988 ++ + E EK IL+ +G+ AV P++ L GQR A +I+ ++R Sbjct: 433 TTQTALEREKRILQIERDGRGAVAPVIAAEAARERLASTNLNQGQREAAELIVSAANRVV 492 Query: 989 VVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVDAQTLASFLH 1048 VQG+AG GK+ ++ + E E V L V +R V+A TLASFL Sbjct: 493 GVQGFAGTGKSH----MLDTAKQMIEGEGYHVRALAAYGSQVKALRELNVEANTLASFL- 547 Query: 1049 DTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAP 1108 R+ + S T+ ++DE+ +V M + L G R V GDT Q +AI Sbjct: 548 ------RAKDKNIDSRTVLVIDEAGVVPTRLMEQTLKLAEKAGARVVLMGDTAQTKAIEA 601 Query: 1109 GQPFRLQQTRSAADVAIMKEIVRQ-TPELREAVYSLINRDVERALSGLESVKPSQVPRQE 1167 G+PF Q + A M+EI RQ PEL+ AV +A S LE +K Sbjct: 602 GRPFDQLQA-AGMQTAHMREIQRQKNPELKIAVELAA---AGKASSSLERIK-------- 649 Query: 1168 GAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQT 1227 VTE + E + A A+ LK P+ R++T Sbjct: 650 -------DVTEIKNHHERRAAVAEAYIALK-----------------------PDERDRT 679 Query: 1228 LIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWET----- 1282 LIV+ NE RR +N + VRE G GK + L + E R ++ Sbjct: 680 LIVSGTNEARREINQI---VREGLGTAGK-GIEFDTLVRVDTTQAERRHSKNYQVGHVIQ 735 Query: 1283 -HRDALV--LVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRV 1339 RD L +R+ + L + + +G SP +++Y P+ + Sbjct: 736 PERDYAKTGLQRGELYRVVETGPGNRLTVIGEHDGQRIQFSP--MTHTKISVYQPERAEL 793 Query: 1340 GTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYA 1399 GD +R T++D+ V AV VT++DG++ E+ P + H+D AYA Sbjct: 794 AVGDTIRITRNDKHLDLANGDRMKVVAVEDRKVTVTDGKRNVEL-PTDKPL--HVDHAYA 850 Query: 1400 ITAHGAQGASETFAI--ALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAI 1457 T H +QG + + A + RK + YVA+SR + +V+T++R AI Sbjct: 851 TTVHSSQGLTSDRVLIDAHAESRTTRK-----DVYYVAISRARFEARVFTNDRGKLPAAI 905 Query: 1458 NNAVQKGTAHDV 1469 K AHD+ Sbjct: 906 ARENIKSAAHDL 917 >UniRef50_Q1N8W9 TrwC protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N8W9_9SPHN Length = 1075 Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 131/394 (33%), Positives = 188/394 (47%), Gaps = 61/394 (15%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVL--GSMGERWAGRGAEQLGLQGSVDKDVFTRLLEG 58 M++++ +RS+ A +Y+ DNYY S+ +W G GAE+LGL+G V D + +G Sbjct: 1 MLTVSAIRSSSGASSYFA-ADNYYSQPDTSISNQWHGAGAERLGLEGEVAPDALEAIFDG 59 Query: 59 RLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVE 118 P D + N R G DLTF+APK VS++A+ GGD RL+ A AV + +E Sbjct: 60 INPGTGDRITPE---NTVRKGVDLTFNAPKGVSLLALEGGDARLLKAQETAVMRTMAYIE 116 Query: 119 A-LASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH-NGEWKTLS 176 A RVM DG + V T NL A F HDT+R+QE LHTH +AN+TQ +G WK L Sbjct: 117 KYFAQARVMKDGVRQVVNTKNLTYAAFTHDTNRNQEEHLHTHVTIANMTQMPDGSWKALH 176 Query: 177 SDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVEAFSG 236 +D + K N FG Y +L + V LGY+T G + +++ G+P Sbjct: 177 NDAIWK---------NNTLFGSRYNAELNQLVRDLGYQTHATGNYAQFDITGIPQNITEL 227 Query: 237 RSQTIREAVGEDASLKSRD-----VAALDTRKSKQHVDPEIKMAEWMQTLKE----TGFD 287 S E + A L +D + LDTR K+ P W+Q E GFD Sbjct: 228 NSTRAGEIMARSAELGIKDRAGRGIVILDTRNPKE---PISDRGAWLQAAYEKNLAAGFD 284 Query: 288 IRAY----RDAADQRADLRTLTPGPA----SQDGPDV----------------------- 316 +RA+ R+A+ +R+ + A + GP+V Sbjct: 285 VRAFAESAREASQERSTILDRVVDMAHRLGERLGPNVDLSDPRMSHSISDRLFMPIEKLR 344 Query: 317 -QQAVTQAIAGLSERKVQFTYTDVLARTVGILPP 349 + AV AI LSER+ FT +DV+ +G P Sbjct: 345 TEWAVASAINKLSEREAVFTQSDVIKTALGFREP 378 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 65/178 (36%), Positives = 91/178 (51%), Gaps = 17/178 (9%) Query: 969 LTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNM----LPESERPRVVGLG 1024 L +GQ A R L + DRF VQG AG GK+T +AV M LP++ + VVGL Sbjct: 465 LNAGQMVAARHALSSPDRFVAVQGDAGTGKSTMVQAVSEVQQMVAASLPDTNKT-VVGLA 523 Query: 1025 PTHRAVGEM-RSAGVDAQTLASFLHDTQLQQRSGETP-------DFSNTLFLLDESSMVG 1076 + V ++ SA +++ T+ SFLH + R G + ++ +F++DESS+VG Sbjct: 524 SYNAMVKDLGESAKIESHTIQSFLHAYENIARYGSEDRQAEARVELADKIFIVDESSVVG 583 Query: 1077 NTDMARAYALIAAGGG--RAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQ 1132 M IA G + V GD QL AIA G+ F + Q SA D M E +RQ Sbjct: 584 TRAM-HGLVTIAEKLGIEKMVFMGDRYQLAAIAQGKLFAVGQD-SALDTRRMSENIRQ 639 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 53/165 (32%), Positives = 90/165 (54%), Gaps = 13/165 (7%) Query: 1295 HRIAGISKDDGLITLQD-AEGNTRLISPREAVAEG----VTLYTPDTIRVGTGDRMRFTK 1349 + +A +SK + +TL D ++G I+PR LY I + G+++R+T Sbjct: 768 YDVADVSKTE--VTLVDRSDGTIHTINPRGFSTNDDRFQAGLYIAKEISIHEGEKIRWTN 825 Query: 1350 SDRERGYVANSVWTVTAVSGDSVTLS---DGQQT-REIRPGQEQAEQHIDLAYAITAHGA 1405 +D + G ++ T+T + GD +T++ DG + I Q++ ++ DLAYAI A A Sbjct: 826 NDHKEGLFRSTEATITKLDGDVMTVNHKVDGVDVEKSIDLTQDKMGEYFDLAYAINADQA 885 Query: 1406 QGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNR 1450 QGA+ T IAL E + +A +AYV ++R K ++ +YTD+R Sbjct: 886 QGATATNVIALMTAE--IRALASRANAYVMMTREKDNLWIYTDDR 928 >UniRef50_B4WV74 TrwC relaxase family n=4 Tax=Synechococcus sp. PCC 7335 RepID=B4WV74_9SYNE Length = 1090 Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 221/798 (27%), Positives = 355/798 (44%), Gaps = 115/798 (14%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLG----SMGERWAGRGAEQLGLQGSVDKDVFTRLL 56 M++ A V+ A AG+YY +KD+YY G +W G+GA LGL G VD+ F +LL Sbjct: 1 MLTNANVK-AEHAGSYY-EKDDYYTQGDPDLQSDTQWQGKGAAVLGLSGPVDQSAFQQLL 58 Query: 57 EGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQ 116 G+ P G L + +HR D TFSAPKSVS+ ++ D+R+I AH+QAV + Sbjct: 59 YGQTPSGESLHSQKIDPKKHRAATDYTFSAPKSVSIAGLIQKDRRVIKAHDQAVSTVLSV 118 Query: 117 VEA-LASTRVMTDGQS--ETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ-HNGEW 172 +E+ A TRV G S V TGN++ A F H+TSR+Q+PQLHTH VV N TQ NG W Sbjct: 119 LESRYAQTRVR-HGPSIRSRVTTGNIIAATFRHETSREQDPQLHTHCVVINSTQLANGRW 177 Query: 173 KTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP-- 230 ++++++++ K N+ G Y+ +L Q+ LGYE G +G++E Sbjct: 178 QSMANEEIVK---------NRKLLGEFYQNELAVQLRQLGYEIAPQG-NGLFECKSYEQP 227 Query: 231 -VEAFSGRSQTIREAVGE-DASL----------KSRDVAALDTRKSKQHVDPEIKMAEWM 278 + FS RS+ I + + +A L K ++ A L TR KQ V E+ +A W Sbjct: 228 LLNLFSTRSRQIEAYIDKWEAKLQAEGRKPLSPKQKEQATLATRLKKQSVPREVLLAGWE 287 Query: 279 QTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTD 338 + + ++ L TL+ + A T+ ++ +ER+ F Sbjct: 288 SAISSGEVKLPEIPNS------LPTLSEKVQVAVDGKLMNAATEGVSHAAERESVFKREK 341 Query: 339 VLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRD 398 V R V E+ + E + + AIS+ L+P + L+T+ + EL A+ Sbjct: 342 V-ERFV----LEHHLGEHSFDELQSAISQTDLVPAEE---LYTTEAAIERELDTIAM--- 390 Query: 399 IMKQNRVTV-------HPEKSVPRTAGYSDAV-----------SVLAQDRPSLAIVSGQG 440 MKQ + V V T +DAV + ++QD+ +++ QG Sbjct: 391 -MKQGQGQVAEIAPLSDASAFVAATVAETDAVLTEGQHLAILETAISQDQ----LIAWQG 445 Query: 441 GA-AGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAF 499 A AG+ + L +A EQG EV A ++ + ++ + G + + Sbjct: 446 VAGAGKTYSLKLLAQLATEQGYEVTGYAPSAQAANVLAEETNIEGSTVARLLHSQDRDDS 505 Query: 500 TPGSTVIVDQGEKLSLKETLTLLDGAARHNVQV-LITDSGQRTGT--GSALMAMKDAGVN 556 + IVD+ LS K+ +LL A + +V L+ D+ Q + G+ +++ AGV Sbjct: 506 DKKAIWIVDEAGLLSAKDAHSLLKKAQVNEARVILVGDTRQLSAVEAGNPFRSLQSAGVA 565 Query: 557 TYRWQ------------------GGEQ--------RPATIISEPDRNVRYARLAGDFAAS 590 T + GEQ R I + +R + D+ Sbjct: 566 TCYLEESRRQKTEALQTAVVCLAAGEQLEGLETLDRAGMISKVENDEIRQLAITRDYIRL 625 Query: 591 VKAGEESVAQVSGV-REQAILTQAIRSELKTQGVLGLPEVTMTAL------SPVWLDSRS 643 + +SG RE+ L IRS L+ +G LG M +L P + + Sbjct: 626 SPEERQQTLILSGTNRERLALAGTIRSALQREGTLGEDTFKMGSLRAKDRTKPQLKYACA 685 Query: 644 RYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWS 703 L D+ P ++ + R R V + A + LTL A G T ++ + + Sbjct: 686 YALNDVIVPVKDYRRYGMQRREQYRVVGLDIAA--NRLTLAAADGRTFAFDPATC-AEKT 742 Query: 704 LFRPEKMPVADGERLRVT 721 + +++ VA GE+LR T Sbjct: 743 TYEVQQLRVAPGEQLRWT 760 Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 121/499 (24%), Positives = 205/499 (41%), Gaps = 82/499 (16%) Query: 969 LTSGQRAATRMILETS---DRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGP 1025 LT GQ A ILET+ D+ QG AG GKT + + L + V G P Sbjct: 422 LTEGQHLA---ILETAISQDQLIAWQGVAGAGKTYSLKLLA----QLATEQGYEVTGYAP 474 Query: 1026 THRAVGEM-RSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAY 1084 + +A + ++ T+A LH Q R ++++DE+ ++ D Sbjct: 475 SAQAANVLAEETNIEGSTVARLLHS---QDRDDSD---KKAIWIVDEAGLLSAKDAHSLL 528 Query: 1085 ALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLI 1144 R + GDT QL A+ G PFR Q+ A + + ++T L+ AV L Sbjct: 529 KKAQVNEARVILVGDTRQLSAVEAGNPFRSLQSAGVATCYLEESRRQKTEALQTAVVCLA 588 Query: 1145 NRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDV 1204 + L GLE++ + + +++ + + +L Sbjct: 589 AGE---QLEGLETLDRAGM------------ISKVENDEIRQL----------------- 616 Query: 1205 PMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVL 1264 AI RDY +PE R+QTLI++ N +R L I ++ G LG++ + L Sbjct: 617 ------AITRDYIRLSPEERQQTLILSGTNRERLALAGTIRSALQREGTLGEDTFKMGSL 670 Query: 1265 NTANIRDGELRRLSTWETHRDALVLVDNV---------YHRIAGISKDDGLITLQDAEGN 1315 + +L+ + + D +V V + +R+ G+ +TL A+G Sbjct: 671 RAKDRTKPQLKYACAYALN-DVIVPVKDYRRYGMQRREQYRVVGLDIAANRLTLAAADGR 729 Query: 1316 TRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGD-SVTL 1374 T P A T Y +RV G+++R+T+++ G TV +V S TL Sbjct: 730 TFAFDP--ATCAEKTTYEVQQLRVAPGEQLRWTRNEAVAGARNGQTVTVESVDASGSATL 787 Query: 1375 SDGQQTR---EIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFES 1431 D + R +R +Q++D A T + +QG + +A + ++ E Sbjct: 788 RDPKGERLDVSLR-----GQQYLDYALVSTTYSSQGKTADRVLAAIDSTLSK------EG 836 Query: 1432 AYVALSRMKQHVQVYTDNR 1450 YVA+SR K + +YT +R Sbjct: 837 LYVAVSRAKSSLSLYTTDR 855 >UniRef50_B1X3A0 Putative TrwC/TraI protein n=2 Tax=Cyanothece RepID=B1X3A0_CYAA5 Length = 1264 Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 212/820 (25%), Positives = 349/820 (42%), Gaps = 143/820 (17%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSV-DKDVFTRLLEGR 59 M++I V +A A Y+ + YY G RW G GA L L G + + D + LL+G+ Sbjct: 1 MLTIKNV-NAELAKTYF--EKGYYEEG----RWFGEGAANLNLTGEIKNHDAYNNLLDGQ 53 Query: 60 LPDGAD--LSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQV 117 PDG + R G N+HR D TF+APKSVS+ A++GGD+RLI+AH +AV+ + + Sbjct: 54 SPDGNHCLMGRKIKG-NQHRAAIDCTFNAPKSVSLQALVGGDERLIEAHRKAVNQTLALM 112 Query: 118 EA-LASTRVMTDGQSETVL-TGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH-NGEWKT 174 E+ A +R++ GQ V+ TG L +A F+H +R+ +P LHTH VV NVTQ +G+W++ Sbjct: 113 ESRYAQSRILKKGQPRQVVQTGKLAVAQFDHIETRNLDPHLHTHCVVMNVTQRDDGQWRS 172 Query: 175 LSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP---V 231 L +D +Y Q G +Y+ L ++ LGY+ E +HG +E+ G + Sbjct: 173 LHNDA---------IYRQQKLLGMVYQHNLALELRKLGYQVE-AKQHGQFEIAGYEKKDL 222 Query: 232 EAFSGRSQTIREAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKE-------- 283 E FS R Q I GE+AS+ R++A +TR K+ V P +W + E Sbjct: 223 EFFSKRRQQILAEAGENASVVERNIAWGNTRVKKEVVSPSELKQKWQREASELGVKFVNP 282 Query: 284 -TGFDIRA---------------------------YRDAADQRADLRTLTPGPASQDGPD 315 TG D + +D +A+ + SQ P Sbjct: 283 NTGLDKKGEGLGEQREQREQRKQREQREQREQREQRSRGSDYQANQGNIDQNAISQPSPI 342 Query: 316 VQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDR 375 V AIA ER V F +V + P N + LD+ Sbjct: 343 KANIVNDAIAHCEERAVAFRLEEVEKFILLNGQPIN------------------IKNLDK 384 Query: 376 EKGLFTSGIHVLDELSVR-----ALSRD-----IMKQNRVTVHPEKS----------VPR 415 G + I+V D L+ R AL R+ +M + + P S + Sbjct: 385 TIGQHSQLINVSDNLNRRYTTEAALQRELATIRLMLEGKNKERPICSEAKINQGLAPISL 444 Query: 416 TAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMN 475 T G +A++ R ++ G G AG+ + ++++ G V+ A + Sbjct: 445 TEGQQEAITTALSSRDTVMAWQGVAG-AGKTYALNHFTTLSQKNGYSVKGFAPSAEAAKV 503 Query: 476 MKQDERLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLIT 535 + + + + + + P IVD+ LS K LL A N +VL+ Sbjct: 504 LGFEVGIKADTVASLLYSKQAKQVEPNQIWIVDEAGLLSAKAAYELLKRAKAENARVLLV 563 Query: 536 -DSGQRTGT--GSALMAMKDAGVNTYRW-QGGEQRP------------------------ 567 D+ Q + G+ +++ AG+ T R Q QR Sbjct: 564 GDTRQLSAVEAGNPFKSLQAAGMTTARMNQSLRQRTPELQTAVDFISKGEIDAGFGILNQ 623 Query: 568 ATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVR-EQAILTQAIRSELKTQGVLG- 625 A + E + ++ D+ +A E ++G E+ +TQ IR LK +G LG Sbjct: 624 ANCLIEVAEEEKINQIVNDYLKIPEADREKTLILAGTNAERLAITQTIRQGLKEEGKLGE 683 Query: 626 ---LPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDR-YVIDRVTAQSHSL 681 L ++ L+ V + R+ + +V +N + R + + + + SL Sbjct: 684 GVKLTQLKSKDLTRVQM----RFTHHLEIGDLVSPAFNYKQRQLSKGELYEIIDKDVDSL 739 Query: 682 TLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVT 721 TL+D+ G V++ L +++ ++ +A G+RL+ T Sbjct: 740 TLKDSTGNR--VKVDPLFEK-AVYGSSEIEIAVGDRLKWT 776 Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 139/541 (25%), Positives = 228/541 (42%), Gaps = 88/541 (16%) Query: 933 SRASYEAEKSILRHILEGKEAVMPLMERVP---GELMEKLTSGQRAATRMILETSDRFTV 989 + A+ + E + +R +LEGK P+ G LT GQ+ A L + D Sbjct: 405 TEAALQRELATIRLMLEGKNKERPICSEAKINQGLAPISLTEGQQEAITTALSSRDTVMA 464 Query: 990 VQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM-RSAGVDAQTLASFLH 1048 QG AG GKT ++ L + V G P+ A + G+ A T+AS L+ Sbjct: 465 WQGVAGAGKTY----ALNHFTTLSQKNGYSVKGFAPSAEAAKVLGFEVGIKADTVASLLY 520 Query: 1049 DTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIA---AGGGRAVASGDTDQLQA 1105 Q +Q N ++++DE+ ++ AY L+ A R + GDT QL A Sbjct: 521 SKQAKQVE------PNQIWIVDEAGLLS---AKAAYELLKRAKAENARVLLVGDTRQLSA 571 Query: 1106 IAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPR 1165 + G PF+ Q + + + ++TPEL+ AV + +++ Sbjct: 572 VEAGNPFKSLQAAGMTTARMNQSLRQRTPELQTAVDFISKGEIDAGF------------- 618 Query: 1166 QEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEA-R 1224 G + + E + +E K+ + IV DY + PEA R Sbjct: 619 --GILNQANCLIEVA--EEEKINQ----------------------IVNDYL-KIPEADR 651 Query: 1225 EQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHR 1284 E+TLI+ N +R + I ++ G+LG E V + L + ++ ++R E Sbjct: 652 EKTLILAGTNAERLAITQTIRQGLKEEGKLG-EGVKLTQLKSKDLTRVQMRFTHHLEIG- 709 Query: 1285 DALVLVDNVYHRIAG-------ISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTI 1337 D + N R I KD +TL+D+ GN + P A +Y I Sbjct: 710 DLVSPAFNYKQRQLSKGELYEIIDKDVDSLTLKDSTGNRVKVDPLFEKA----VYGSSEI 765 Query: 1338 RVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTL--SDGQQTREIRPGQEQAEQHID 1395 + GDR+++TK+DR++G +TV A+ G T+ DGQQ QH+D Sbjct: 766 EIAVGDRLKWTKNDRKQGRRNGQEFTVKAIEGTIATIEYKDGQQD----SFNFSVPQHLD 821 Query: 1396 LAYAITAHGAQGAS-ETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWT 1454 T + +QG + + I+ + T G ES YVA+SR+K +++YT ++ Sbjct: 822 YGLVSTTYSSQGKTADQVLISADYT-------VGKESFYVAVSRVKSDLKLYTLDKDNLL 874 Query: 1455 D 1455 D Sbjct: 875 D 875 >UniRef50_Q0BRZ0 TraI protein (DNA helicase I) n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BRZ0_GRABC Length = 571 Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 113/272 (41%), Positives = 156/272 (57%), Gaps = 24/272 (8%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMG-ERWAGRGAEQLGLQGSVDKDVFTRLLEGR 59 + +I+ + SAG A +YY + D+YY G + W G+GA+ L L G+VD + F RLLEG Sbjct: 3 VATISALTSAGQAASYY-EADDYYAEGGLAPSEWLGQGAQVLDLAGAVDHEQFARLLEGH 61 Query: 60 LPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEA 119 + G L M++G HRPG+D+TFSAPKSVS+MA + GD+RLI H +AV A+ E Sbjct: 62 VA-GQSLGTMREGEWEHRPGWDVTFSAPKSVSIMAEVAGDRRLIAVHERAVKTALGLAEQ 120 Query: 120 -LASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHN-GEWKTLSS 177 +TR+ DG TGNLV+A F H TSR +PQLHTH V+ N+T+ G+W++L Sbjct: 121 HFTATRLREDGSIRREATGNLVIASFRHGTSRALDPQLHTHNVILNMTRDKAGQWRSLEP 180 Query: 178 DKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGV---PVEAF 234 Y Q G +YR++L +V+ LGY E GK +E+ G+ +EAF Sbjct: 181 ---------RAFYQMQKLMGAVYRQELAAEVQRLGYAIE-RGKDSTFEIAGIGTETLEAF 230 Query: 235 SGRSQTIREAVGE------DASLKSRDVAALD 260 S RS I + E AS + VAALD Sbjct: 231 SQRSAAIEARLAERGKSRDQASAAEKQVAALD 262 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 71/261 (27%), Positives = 110/261 (42%), Gaps = 30/261 (11%) Query: 1209 YEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTAN 1268 + I +DY + R + L++ E R VL ++R + E G + P + TA Sbjct: 278 FAQIAQDYASLDTKERRKALVIEPSREGRDVLTK---EIRHRLAENGA--LHGPTVETAR 332 Query: 1269 IRDGELRRLSTWETHRDAL---VLVDNVY----------HRIAGISKDDGLITLQDAEGN 1315 + +L R + H A+ + Y +R+ GI +TL D G Sbjct: 333 LVPRDLTRAEAKDAHSYAIGDTIRFAKDYADKGVSKAQAYRVVGIDTKKAALTLADQHGG 392 Query: 1316 TRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDS---- 1371 R+ A +T + I + GD+++FT++DR G + V AV + Sbjct: 393 AIDWRLRQWGASHSQAFTSEVIELRAGDQVQFTRNDRVLGRINGQQGEVIAVDPATREAK 452 Query: 1372 VTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQG--ASETFAIALEGTEGNRKLMAGF 1429 V L+ G+ E +QHI +Y TA AQG A TF I + N + Sbjct: 453 VQLARGKI--ETLALDNPRDQHIAHSYVATAFAAQGRTAERTF-IHADSAATN---LLDQ 506 Query: 1430 ESAYVALSRMKQHVQVYTDNR 1450 +S YVALSR K VYT++R Sbjct: 507 KSFYVALSRAKDTTAVYTNDR 527 >UniRef50_A0B527 TrwC protein n=3 Tax=Burkholderiales RepID=A0B527_BURCH Length = 964 Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 187/618 (30%), Positives = 286/618 (46%), Gaps = 88/618 (14%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVL--GSMGERWAGRGAEQLGLQGSVDKDVFTRLLEG 58 MMS+ V SAG A +Y++ KDNYY G W G+GA LGL G VD++VF +LL G Sbjct: 1 MMSMHNVGSAGQALHYFS-KDNYYTTDQGLEHSAWFGKGAATLGLNGQVDRNVFFKLLSG 59 Query: 59 RLPDGADLSRMQDGSN-----RHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFA 113 ++ D L R+ N HRPG DLTFSAPKSVS+ A + D+ + AH +AV A Sbjct: 60 QVGD-QQLGRVVLDENGEPEVVHRPGIDLTFSAPKSVSIAAEVFEDREVRLAHEEAVKEA 118 Query: 114 VRQVEA-LASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH-NGE 171 + VEA +A R DGQ+ TGN+V ALF H+TSRD +P HTHA+V N TQ +GE Sbjct: 119 LEYVEAYVARARKTVDGQTLVEPTGNVVAALFRHNTSRDLDPDTHTHALVMNATQRADGE 178 Query: 172 WKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP- 230 W++L++D+ +Y Q G +Y L ++ GY ++G +E+ GV Sbjct: 179 WRSLTNDE---------LYVQQKVIGAIYTSSLARGLQKRGYAITAPDENGNFELVGVTR 229 Query: 231 --VEAFSGRS----QTIREAVGED---ASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTL 281 +E FS RS + +R A G D A+ ++ A L TR+ K VD E +W + Sbjct: 230 EQIEHFSQRSAARDRWLR-ANGIDPANATAAEKERAVLATRERKVGVDHEALSVQWRERA 288 Query: 282 KETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQ-------QAVTQAIAGLSERKVQF 334 + G D + A + A + G D + +A+ A + L ER++ Sbjct: 289 QAVGLDYSVIQQKARE-----------AREAGTDARVVKLSGIEALRFAASHLGEREIVL 337 Query: 335 TYTDV----LARTVGILPPENGVIERARAGI---------DEAISREQLIPLDR---EKG 378 D+ L VG P N +++ + + D I+ E+++ +R E Sbjct: 338 NQYDLVQTALEHAVGRTSP-NQILDAYKKLVHQGKIVDLPDGNITTEKMLNTERWTVENA 396 Query: 379 LFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVP---RTAGYSDAVSVLAQDRPSLAI 435 L V ++ L R ++Q T E++ P T G A+ R + Sbjct: 397 LAQRD--VTPAIAPAELVRSRIEQAIATARAERNDPTFDYTPGQRGAIEHALTGRDRIVA 454 Query: 436 VSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELIT------G 489 V G G G+ V V +A EQG V+ +AA ++ ++ D + + +T Sbjct: 455 VQGLAG-VGKTTMVKGTVQVAHEQGWLVRGMAATGQAAKQLENDSGIQADTVTMFEIHEQ 513 Query: 490 RRQ--LLEGMAFTPGST-----VIVDQGEKLSLKETLTLLDGAARHNVQVLITDSG---Q 539 RRQ L + P + +VD+ L+ ++ L A R + +V++ Q Sbjct: 514 RRQDDLKVLREYVPDLSRERELWLVDESSFLAQRQMARLFKMAERADAKVILLGDRLQLQ 573 Query: 540 RTGTGSALMAMKDAGVNT 557 G ++D GV T Sbjct: 574 AIEAGKPFEILQDEGVAT 591 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 143/530 (26%), Positives = 236/530 (44%), Gaps = 91/530 (17%) Query: 970 TSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRA 1029 T GQR A L DR VQG AGVGKTT + + + + V G+ T +A Sbjct: 435 TPGQRGAIEHALTGRDRIVAVQGLAGVGKTTMVKGTVQVAH----EQGWLVRGMAATGQA 490 Query: 1030 VGEMRS-AGVDAQTLASF-LHDTQ----LQQRSGETPDFSNT--LFLLDESSMVGNTDMA 1081 ++ + +G+ A T+ F +H+ + L+ PD S L+L+DESS + MA Sbjct: 491 AKQLENDSGIQADTVTMFEIHEQRRQDDLKVLREYVPDLSRERELWLVDESSFLAQRQMA 550 Query: 1082 RAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQ-TPELREAV 1140 R + + + + GD QLQAI G+PF + Q A A M +I RQ PEL++AV Sbjct: 551 RLFKMAERADAKVILLGDRLQLQAIEAGKPFEILQDEGVA-TAQMTQIQRQKNPELQQAV 609 Query: 1141 YSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEA 1200 + AP+ +T+ + ++ A+ + ++A E Sbjct: 610 AITVG---------------------TADLAPDEPLTDLNLARNARAFDFLEQAGRVTE- 647 Query: 1201 FPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVM 1260 + P L + + R Y R P R QT+I+T NEDR +N+ + ++ GEL Sbjct: 648 -HEDPRDLIDLMARQYVDRGPR-RNQTIIITPFNEDRVEINNAVRAELQERGELDVNDSA 705 Query: 1261 VPVLNTANIRDGELRRLSTWETH-----------RD--ALVLVDNVYHRIAGISKDDGLI 1307 + + DG++ R E RD ++ Y R+ G D+G++ Sbjct: 706 HTIFRS----DGDMTRAKQKEAQYYTKDMTVRFGRDYQKILASRGEYMRVVGTRPDEGIV 761 Query: 1308 TLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDR--ERGYVANSVWTVT 1365 L+ ++G+ P++ V +Y +T + D +RFT+ D + G+ A TV Sbjct: 762 VLRKSDGSLMEWEPKK--YNRVEVYLSETRNLAARDVIRFTRGDELVKNGHEA----TVV 815 Query: 1366 AVSGDS--VTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGAS-ETFAIALEGTEGN 1422 +V+ + + L+DG++ P A++H D AYA+T H QGA+ E + + + Sbjct: 816 SVNENQAVLRLADGKEI----PWDLDAQRHWDHAYAVTVHAGQGATREQAMLHIPSHKME 871 Query: 1423 R---------------KLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAI 1457 R + + G S YV L+R + +Q++T TDAI Sbjct: 872 RDPEDARRQSDVAMTVRRIFGDRSFYVGLTRAVEDLQIFT------TDAI 915 >UniRef50_B1XRA4 DNA helicase, TrwC and TraI like protein n=1 Tax=Synechococcus sp. PCC 7002 RepID=B1XRA4_SYNP2 Length = 1249 Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 228/814 (28%), Positives = 358/814 (43%), Gaps = 130/814 (15%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGE--RWAGRGAEQLGLQGSV-DKDVFTRLLE 57 M++IA + A AG+YY K+NYY E +W G+GA LGL G + D +F +L+ Sbjct: 1 MLTIATMTPA-KAGSYY--KENYYAEEEQVEFSQWWGKGATALGLSGKISDGKIFQNILQ 57 Query: 58 GRLPDGADLSRMQDGSNRHR-PGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQ 116 G+ DG R + G DLTFSAPKSVS+ A++ D+ LI+AHNQAV+ + Sbjct: 58 GKTADGQTQLRQAPPKGKEAIAGTDLTFSAPKSVSIAALVNQDQDLIEAHNQAVERVLSL 117 Query: 117 VEA-LASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH-NGEWKT 174 +E TRV + N+ +A F HDT+R+ P LHTH +V N+ Q +G W++ Sbjct: 118 IEERYGETRV----NKQHTPVKNICVAKFLHDTNRELNPNLHTHCLVMNMAQDASGIWRS 173 Query: 175 LSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP---V 231 ++ +Y ++I G+LYR +L + V+ LGYE E+ G++E+ G V Sbjct: 174 AAN---------RLLYQHRILLGKLYRNELAQAVQNLGYEIEIRAD-GLFELKGYTREQV 223 Query: 232 EAFSGRSQTIREAV---GEDASLKSRDVAALDTRKSKQH-VDPEIKMAEWMQTLKETGFD 287 E FS R Q I E + G + + ++R A +TRK KQH VD + + EW T + G D Sbjct: 224 EGFSDRHQQILEYLKTEGLEDTNENRIKALFETRKIKQHDVDRQALLVEWQTTAE--GLD 281 Query: 288 IRAYRDAADQRADLRTLTPGPASQ---DGPDVQQAVTQAIAGLSERKVQFTYTDVLARTV 344 I P P + G ++ + V QA+ ER FT D+ V Sbjct: 282 IEH---------------PTPNLEYPVTGKNLAELVAQAVRHSEERTAIFTREDLEVFIV 326 Query: 345 GILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSV--RALSRDIMKQ 402 P E A ID A R L G+ + E S+ ++ +M+ Sbjct: 327 A--EPTGHSFEEIEAAID-ANPR-----------LIRRGLRLATEESLIREKMTIALMQA 372 Query: 403 NR------VTVHPEKSVPRTAGYSDAVS--VLAQDRPSLAIVSGQGGA-AGQRERVAELV 453 + +T + S T +DAV+ + +QDR +V G A AG+ + LV Sbjct: 373 GQGKLAPMLTTQTQLSEVLTTSQTDAVNHALSSQDR----VVGWVGVAGAGKTFTLNTLV 428 Query: 454 MMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGSTVIVDQGEKL 513 +A+ QG EV A D S + DE G L + ++D+ KL Sbjct: 429 KIAQAQGIEVSGFAPD-ASSAEVLGDEVGIGTDTVAYHLLQQHEPSQKRQLWLIDEAGKL 487 Query: 514 SLKETLTLLDGAARHNVQVLIT-DSGQRTGT--GSALMAMKDAGVN-------------- 556 S ++ LL +++ N QVL+ D Q T G+ ++ D G++ Sbjct: 488 SAQKAYQLLLKSSQQNAQVLLVGDPKQLTAVNAGAPFKSLIDNGLSASHLKDFLRQKDSI 547 Query: 557 -------TYRWQGGE-----QRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGV 604 TY GGE Q+ + PD R ++A + +A +SG Sbjct: 548 IARAVQLTYHNLGGEAIAWLQKHGKVSEIPDIEDRAQQIAAAYLKLNEAERAETLVLSGT 607 Query: 605 -REQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMV---MEQWN 660 RE+ + +R LK +G + E LS + + Y G V ++ N Sbjct: 608 HRERHGIIHQLRVGLKREGKIQETEYLTETLSRKDMTEEQKQHARFYAVGDVLIPLKDHN 667 Query: 661 PETRSHDRYVI-----DRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADG 715 RS RY + D VT +H +TL + +G ++ +F ++P+A G Sbjct: 668 CLKRS-KRYQVTQISGDDVTLNNH-ITL-NMKGLKYPLKT-------EVFTKNQLPIAVG 717 Query: 716 ERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVV 749 +RL+ T + + G + + D++T +V Sbjct: 718 DRLKWTRNNRPQKRTNGREFTIIGI--DSLTCLV 749 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 114/540 (21%), Positives = 212/540 (39%), Gaps = 90/540 (16%) Query: 931 LVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVV 990 L + S EK + + G+ + P++ +L E LT+ Q A L + DR Sbjct: 354 LATEESLIREKMTIALMQAGQGKLAPMLT-TQTQLSEVLTTSQTDAVNHALSSQDRVVGW 412 Query: 991 QGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGP---THRAVGEMRSAGVDAQTLASFL 1047 G AG GKT ++ + +++ V G P + +G+ G+ T+A L Sbjct: 413 VGVAGAGKTFTLNTLVK----IAQAQGIEVSGFAPDASSAEVLGD--EVGIGTDTVAYHL 466 Query: 1048 HDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALI---AAGGGRAVASGDTDQLQ 1104 LQQ P L+L+DE+ G +AY L+ + + + GD QL Sbjct: 467 ----LQQHE---PSQKRQLWLIDEA---GKLSAQKAYQLLLKSSQQNAQVLLVGDPKQLT 516 Query: 1105 AIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGL--ESVKPSQ 1162 A+ G PF+ + + +K+ +RQ S+I R V+ L E++ Sbjct: 517 AVNAGAPFK-SLIDNGLSASHLKDFLRQKD-------SIIARAVQLTYHNLGGEAI---- 564 Query: 1163 VPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPE 1222 AW +H K++E PD+ + I Y Sbjct: 565 ------AWLQKH----------GKVSE-----------IPDIE-DRAQQIAAAYLKLNEA 596 Query: 1223 AREQTLIVTHLNEDRRVLNSMIHDVR---EKAGELGKEQVMVPVLNTANIRDGELRRLST 1279 R +TL+++ + +R + +IH +R ++ G++ + + + L+ ++ + + + Sbjct: 597 ERAETLVLSGTHRER---HGIIHQLRVGLKREGKIQETEYLTETLSRKDMTEEQKQHARF 653 Query: 1280 WET------HRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYT 1333 + +D L + +++ IS DD + L P + ++T Sbjct: 654 YAVGDVLIPLKDHNCLKRSKRYQVTQISGDDVTLNNHITLNMKGLKYPLK-----TEVFT 708 Query: 1334 PDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQH 1393 + + + GDR+++T+++R + +T+ + + +S + H Sbjct: 709 KNQLPIAVGDRLKWTRNNRPQKRTNGREFTIIGIDSLTCLVSVVDDQGRLDEFSLNDLNH 768 Query: 1394 IDLAYAITAHGAQG--ASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQ 1451 D A T + +QG A + F NR ES VALSR K V ++T N Q Sbjct: 769 CDHAIVGTVYSSQGKTAKQVFVSFGNDPTVNR------ESVLVALSRAKYDVTIWTTNAQ 822 >UniRef50_Q8YK83 Alr8034 protein n=2 Tax=Nostoc RepID=Q8YK83_ANASP Length = 1499 Score = 172 bits (437), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 211/789 (26%), Positives = 348/789 (44%), Gaps = 123/789 (15%) Query: 22 NYYVLGSMGE---RWAGRGAEQLGLQGSVD-KDVFTRLLEGRLPDGAD--LSRMQDGSNR 75 +Y++ G E RW+G+GA++LGL G+VD ++ F+ ++ GR PDG+ +R D S R Sbjct: 14 HYFMEGYYQEGTSRWSGKGAKKLGLSGAVDHQETFSNIVNGRSPDGSQNLCARKLDSSQR 73 Query: 76 HRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEALAS-TRVMTDGQSETV 134 R D TFSAPKSVS+ A++GGD+RLI AH AV ++ +E S TR T+ E + Sbjct: 74 -RAATDFTFSAPKSVSLQALVGGDERLITAHQLAVQKTIKLIEERYSYTRATTEKGQELL 132 Query: 135 LTGNLVMALFNHDTSRDQEPQLHTHAVVANVT--------------------QHNGEWKT 174 T NLV+A F+H +R+ +P LHTHA+V N+T + +WK Sbjct: 133 PTNNLVIAEFDHIETRELDPHLHTHALVMNMTYLEQGKRGVQGKQGEKKKAEEDEEDWKN 192 Query: 175 LSSDKVGKTG------------FIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHG 222 S T F + ++ N+ G +Y+ L +V+ LGYE + +HG Sbjct: 193 FLSSPASPTSPASPAHGSWYSLFNDEIFKNKKFLGMVYQNYLALEVQKLGYEVK-AREHG 251 Query: 223 MWEMPGV---PVEAFSGRSQTIREAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQ 279 +E+ G + FS R Q I A GE+A+ R+ A TR KQ ++P +W + Sbjct: 252 QFEIKGFRDEDLREFSKRRQQILSAAGENATWAEREAAWTATRNIKQKINPTELKVKWRE 311 Query: 280 TLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDV 339 G ++ + P Q + + AIA SER V FT D+ Sbjct: 312 EAAALGVKF------------VQPIEAQPLLQPRLVSYENLEDAIAHCSERNVAFTQEDL 359 Query: 340 LARTVGILPPENGVIERARAGIDEAI-----SREQLIPLDREKGLFTSGIHVLDELSVRA 394 E ++ + A I + +L+ L ++K FT+ V EL+ Sbjct: 360 ----------EKFILNQGLATDVSQIEPLVQANPELLSLSQQKRDFTTLAAVNRELATIK 409 Query: 395 LSRDIMKQNRVTVHP---EKSVPRTAGYSDA-VSVLAQDRPSLAIVSGQGGA-AGQRERV 449 L + + HP E + TA D +VL + + QG A AG+ + Sbjct: 410 LMQSGQGKVSPLAHPEVVENHLETTALNPDQRRAVLTTATTTDQFTAWQGVAGAGKTFAL 469 Query: 450 AELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTP--GSTVIV 507 EL +A G ++ A + + + Q+ + E + R L+ + +V Sbjct: 470 KELKEIAAASGYTIKGFAPNSMAAKVLSQELDVQAETVA--RLLVSELPLEIELNQIWVV 527 Query: 508 DQGEKLSLKETLTLLDGAARHNVQVLIT-DSGQRTGT--GSALMAMKDAGVNTYRWQGGE 564 D+ LS K+ L LL+ AA +VL+ D+ Q + G+ +++ AG+ T Sbjct: 528 DEAGLLSAKDALALLERAALEQARVLLVGDTKQLSAVEAGNPFKSLQQAGIKTSHLNESN 587 Query: 565 QRPAT-------IISEPDRNVRYARLAGDFAASVKAGEESVAQVSG-------------- 603 ++ A +I++ + RL + E +A ++ Sbjct: 588 RQRAPKLKLAVDLIADGQIEEGFKRLDENGCIQTVTAESKIAAIAHEYVTATPEQRARTL 647 Query: 604 -----VREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDS-RSRYLRDMYRPGMVME 657 +E+ +TQAIR L+T+G LG T+T L L S + RY + +VM Sbjct: 648 VLTGTNKERLAITQAIREHLRTEGSLGTA-TTITQLQAKDLTSVQMRYTHNFELGDVVM- 705 Query: 658 QWNPETRSHDRYVIDRVTAQSHSLTLRDAQG---ETQVVRISSLDSSW--SLFRPEKMPV 712 TRS+ R +++ Q + + +D G E + +D+ + +++ + + V Sbjct: 706 ----PTRSYKRRGLEK--GQLYKVVGKDGDGLKLEASNGQHFQVDTGFNKAVYHRQNIEV 759 Query: 713 ADGERLRVT 721 A G+RLR T Sbjct: 760 AVGDRLRWT 768 Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 124/501 (24%), Positives = 201/501 (40%), Gaps = 92/501 (18%) Query: 969 LTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHR 1028 L QR A T+D+FT QG AG GKT + + + + + G P Sbjct: 436 LNPDQRRAVLTTATTTDQFTAWQGVAGAGKT----FALKELKEIAAASGYTIKGFAPNSM 491 Query: 1029 AVGEM-RSAGVDAQTLASFLHDTQLQQRSGETP--DFSNTLFLLDESSMVGNTDMARAYA 1085 A + + V A+T+A L E P N ++++DE+ ++ D Sbjct: 492 AAKVLSQELDVQAETVARLL--------VSELPLEIELNQIWVVDEAGLLSAKDALALLE 543 Query: 1086 LIAAGGGRAVASGDTDQLQAIAPGQPFR-LQQTRSAADVAIMKEIVRQ-TPELREAVYSL 1143 A R + GDT QL A+ G PF+ LQQ + + + E RQ P+L+ AV + Sbjct: 544 RAALEQARVLLVGDTKQLSAVEAGNPFKSLQQ--AGIKTSHLNESNRQRAPKLKLAVDLI 601 Query: 1144 INRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPD 1203 + +E L+ Q +VT E+K+A Sbjct: 602 ADGQIEEGFKRLDENGCIQ------------TVTA-----ESKIA--------------- 629 Query: 1204 VPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPV 1263 AI +Y TPE R +TL++T N++R + I + G LG + Sbjct: 630 -------AIAHEYVTATPEQRARTLVLTGTNKERLAITQAIREHLRTEGSLGTA-TTITQ 681 Query: 1264 LNTANIRDGELRRLSTWETHRDALVLVDNVYHR--------IAGISKDDGLITLQDAEGN 1315 L ++ ++R +E +V+ Y R + KD + L+ + G Sbjct: 682 LQAKDLTSVQMRYTHNFEL--GDVVMPTRSYKRRGLEKGQLYKVVGKDGDGLKLEASNGQ 739 Query: 1316 TRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLS 1375 + +Y I V GDR+R+TK+DR+ G + V A++G + Sbjct: 740 HFQVD----TGFNKAVYHRQNIEVAVGDRLRWTKNDRQLGRRNGQEFVVKAIAGSNA--- 792 Query: 1376 DGQQTREIRPGQE-----QAEQHIDLAYAITAHGAQG-ASETFAIALEGTEGNRKLMAGF 1429 Q + GQ Q QH+D A T + +QG ++ IA + T G Sbjct: 793 ---QIEYLHSGQTEFINLQQAQHLDYATVSTTYSSQGKTADRVLIAADYTIGQ------- 842 Query: 1430 ESAYVALSRMKQHVQVYTDNR 1450 ES YVA+SR + +++YT+N+ Sbjct: 843 ESFYVAVSRARYELKLYTENK 863 >UniRef50_B2TH74 Conjugative relaxase domain protein n=1 Tax=Burkholderia phytofirmans PsJN RepID=B2TH74_BURPP Length = 1486 Score = 172 bits (437), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 116/305 (38%), Positives = 166/305 (54%), Gaps = 29/305 (9%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVL-GSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGR 59 M++ V S+ A NYY + D+YY G GE W G GA+ LGL+G VD+ +F LL+GR Sbjct: 1 MLTFDFVGSSAEAANYYEETDDYYTKPGHRGE-WDGEGAKALGLEGGVDRQIFMDLLDGR 59 Query: 60 LPDGADLSR-----MQDGSNRH-RPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFA 113 LPDG + +DGS R G D TF+APKSVS++A++ D+R+I+AH+ AV A Sbjct: 60 LPDGRQARKSMPHTQKDGSKSAPRLGIDFTFNAPKSVSIVALVKNDRRVIEAHDAAVKDA 119 Query: 114 VRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ-HNGEW 172 + +E+ A R G S TG L++A F HD SRDQ+P LHTHAV N+TQ +G W Sbjct: 120 LAMMESRAIARQKYRGISFREKTGKLIVAKFQHDLSRDQDPHLHTHAVTMNLTQRRDGRW 179 Query: 173 KTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVE 232 L+++ + K+ + Y YR +L + + +GY+ ++G +EM VP E Sbjct: 180 VALANEDMLKSVKVVGAY---------YRAQLAQYLTNMGYDIRAT-RNG-FEMASVPDE 228 Query: 233 A---FSGRSQTIREAVG------EDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKE 283 A FS RS+TI E + E A+ + + DTR K + EW L Sbjct: 229 AIKLFSQRSRTIEEELAKSGLTRETATGELKQNITKDTRAEKTDANRAALRQEWANALAA 288 Query: 284 TGFDI 288 G D+ Sbjct: 289 AGIDL 293 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 152/586 (25%), Positives = 249/586 (42%), Gaps = 88/586 (15%) Query: 931 LVSRASYEAEKSILRHILEGKEAVMPLMERVPGELM---EKLTSGQRAATRMILETSDRF 987 +R + E IL G+ V PL E M L GQ+ A +++L + +RF Sbjct: 935 FTTREMRQTESEILWMERTGRGTVEPLRTAEQAEAMLASTGLNPGQKEAAQLVLTSPNRF 994 Query: 988 TVVQGYAGVGKTTQFRAVMSAVNM----LPESERPRVVGLGPTHRAVGEMRSAGVDAQTL 1043 +QGYAGVGK+ V+ + M E+ +VVGL P ++ G+++QTL Sbjct: 995 IGIQGYAGVGKSHLMSTVVQEIKMEAAQQAETLGYKVVGLAPYGSQNKALQELGMESQTL 1054 Query: 1044 ASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQL 1103 ASFL + G T+ LDE+S+V M A + G R V GD Q Sbjct: 1055 ASFLVREPDPELLG-----PKTIIFLDEASVVSAHQMKDLMARVEQSGARLVMIGDRKQT 1109 Query: 1104 QAIAPGQPFRLQQTRSAADVAIMKEIVRQT-PELREAVYSLINRDVERALSGLESVKPSQ 1162 QA+ G+PF Q A +A + EI RQ L+ AV N ++ ++ LE Q Sbjct: 1110 QAVEAGKPFEQLQDGGMA-LAHVTEIQRQKDATLKAAVEKAANNNIGGSVKLLEK-NTVQ 1167 Query: 1163 VPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPE 1222 + +++ ++ +LA+ DY E Sbjct: 1168 LKKEK--------------ARHGRLAD-------------------------DYVKMPEE 1188 Query: 1223 AREQTLIVTHLNEDRRVLNSMIHD-VREKAGELGKEQVMVPVLNTANIRDGELRRLSTWE 1281 R+ TLIV NE RR +N ++ D ++ GEL V L + ++ E ++ S+++ Sbjct: 1189 QRDGTLIVVGTNETRRKINELVRDKLKLPEGEL------VRALESYDMSRAEHKQASSYQ 1242 Query: 1282 THRDALVLVDN----------VYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTL 1331 +VL+ V++ + +T+ DA GN R + GV+ Sbjct: 1243 ---QGVVLIAERPGEHGLDRGVHYTVRSADARGNTLTVSDAAGNVRSLDATH--LSGVST 1297 Query: 1332 YTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAE 1391 YT I + GD +R T++D +G V +V DSV L +G + + Sbjct: 1298 YTLTDIPIVKGDWLRITRNDNRQGVFNGERHRVLSVDKDSVVLENGAKL------SRASA 1351 Query: 1392 QHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQ 1451 H YA T H AQG + + +E R L + YVA+SR + +++YTD+ Sbjct: 1352 IHAQHGYAQTVHSAQGLTR-HGVLIEAD--TRSLTSNRAVWYVAISRAQHALKIYTDDAG 1408 Query: 1452 GWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAG 1497 G + +K A ++ + + ++ + +A S +R L+ + G Sbjct: 1409 GLARVMAREPKKYAALELRDERREKVIFDA---LSASRTLQQQSRG 1451 >UniRef50_Q3HKI6 TraI n=2 Tax=Rhodobacteraceae RepID=Q3HKI6_RHOS4 Length = 1111 Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 113/295 (38%), Positives = 161/295 (54%), Gaps = 40/295 (13%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGS----MGERWAGRGAEQL------GLQGSVDKD 50 MMS++ V SAG+A + Y + YYV GS W G A++L G VD Sbjct: 1 MMSVSNV-SAGAAASGYYQAEGYYVAGSPEAEAAASWFGSAADELVAMGQEEFAGRVDDA 59 Query: 51 VFTRLLEGRLP-----------DGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGD 99 F+ +L+G P +G L R+ DG +HRPG DLTFSA KSVS++ ++ GD Sbjct: 60 AFSAMLDGHAPPTQRDAEGHWKEGQTLGRVVDGERQHRPGIDLTFSASKSVSIIGLVAGD 119 Query: 100 KRLIDAHNQAVDFAVRQV-EALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHT 158 +R+I AH++AV A+ V E TR +G+ V G +V LF HDTSR +PQLHT Sbjct: 120 ERVIAAHDEAVKAAMSYVEEKFVRTRREVNGEIVAV-PGKMVAGLFRHDTSRALDPQLHT 178 Query: 159 HAVVAN-VTQHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEV 217 HAV+ N V +G+W LS+ E +Y N++ G +YR +L + +E GY E Sbjct: 179 HAVIQNMVLGEDGKWTALSN---------EEIYRNKMLIGAIYRNELAQNLERAGYAVER 229 Query: 218 VGKHGMWEMPGVP---VEAFSGRSQTIREAVGE---DASLKSRDVAALDTRKSKQ 266 VG G+ E+ GVP ++ FS R + I A+ E + + +AAL TR++KQ Sbjct: 230 VGHDGITEIKGVPRELMDGFSKRRKEIEAALDERGIERTAVDSALAALATRRNKQ 284 Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 130/506 (25%), Positives = 206/506 (40%), Gaps = 79/506 (15%) Query: 969 LTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHR 1028 LT GQ+ A + L RF VQGYAG GKT ++ + E V G PT++ Sbjct: 581 LTEGQKEAVALGLTGRGRFVGVQGYAGTGKTH----MVETLRRYAERAGFTVEGAAPTNK 636 Query: 1029 AVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIA 1088 A E+ SA A T+A FL L G D ++ ++DE+ M+ DM +AL+ Sbjct: 637 AAAELASAVPAAGTVARFL----LADAPG---DKKRSILVVDEAGMISTRDM---HALMT 686 Query: 1089 AGG----GRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPE-LREAVYSL 1143 R + GD QL ++ G PF Q ++ AIM +I RQ E R+AV Sbjct: 687 KANELRYARVILVGDVKQLDPVSAGSPF-AQLQKAGMPTAIMADIQRQRNEDARKAVLHA 745 Query: 1144 INRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPD 1203 I +V A S +E ++ P+ Sbjct: 746 IRGEVRAAFSRIEDLRT-----------------------------------------PE 764 Query: 1204 VPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPV 1263 + + R + G RE+T IV N R +N+ I D ++ LG + V V Sbjct: 765 KNQSFTGEVARAWLGLHSSVRERTGIVVLTNRVRGEVNAAIRDELKREHRLGAQDVTVAS 824 Query: 1264 LNTANIRDGELRRLSTWETHRDALVLVDNV-------YHRIAGISKDDGLITLQDAEGNT 1316 L ++ E R ++++ D ++ V +V +R+ ITL+ G Sbjct: 825 LTPLSLTRAEAREAASYKAG-DVVISVRSVEGLERDKLYRVTSTLPYQNSITLRPEGGGA 883 Query: 1317 RL---ISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDS-- 1371 + + A + + GD ++F +D++ G + + +T V+ Sbjct: 884 EVALTLGHGSKAAGSLAAFEVGKREFAAGDEVKFAITDKDCGAINGARGRITKVTEAQID 943 Query: 1372 VTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFES 1431 VTL G++ P A + +D AYA TAH QGA+ I G + +L + +S Sbjct: 944 VTLHGGRKLSV--PTDSLAARGLDHAYAATAHDFQGATVDRIIV--GMTPDEQLTSQ-KS 998 Query: 1432 AYVALSRMKQHVQVYTDNRQGWTDAI 1457 YV +SR + HV + T + D I Sbjct: 999 FYVNISRARDHVTLVTTDPGKLADRI 1024 >UniRef50_D0SGZ5 TrwC protein n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SGZ5_ACIJO Length = 1076 Score = 169 bits (429), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 115/298 (38%), Positives = 161/298 (54%), Gaps = 32/298 (10%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGE-----RWAGRGAEQLGL-QGSVDKDVFTR 54 MMS+ ++S+ A YY+ KDNYY E W G+GAE LGL D D F Sbjct: 1 MMSMTTLKSSSQASTYYS-KDNYYTKEPTAESLEKAEWYGKGAEVLGLVDQDFDPDKFKE 59 Query: 55 LLEGRLPDGADLSRM--QDGS--NRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAV 110 LLEG + + + R+ +DG +HRPG DLTFSAPKSVS+++ + D + +AH AV Sbjct: 60 LLEGTIDEDNKIGRVTYEDGVAVTQHRPGVDLTFSAPKSVSIISEVFKDDDVRNAHEDAV 119 Query: 111 DFAVRQVEA-LASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHN 169 + VE A TR+ DG + V T NLV ALF+H+ SRD +PQ HTHAVV N T ++ Sbjct: 120 KATLDFVEKKYAQTRISVDGSMQKVDTENLVAALFSHNNSRDLDPQTHTHAVVMNATLNS 179 Query: 170 -GEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPG 228 GEW +S+ E +Y NQ G +Y +L ++ LGY+ + +G +E+ G Sbjct: 180 KGEWSAMSN---------EQIYQNQKLIGAIYNSELAVNLKDLGYDLDFKA-NGNFEISG 229 Query: 229 VP---VEAFSGRSQTIREAVGE------DASLKSRDVAALDTRKSKQHVDPEIKMAEW 277 + ++ FS R + + E E AS R+V ALDTR K+ V E +W Sbjct: 230 ISQDVIDEFSQRRKAMLENAEERGVDLSTASASVREVIALDTRTRKKDVTQESLDNDW 287 Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 143/592 (24%), Positives = 254/592 (42%), Gaps = 94/592 (15%) Query: 903 ELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLM--ER 960 ++ E++ +K G L+ D TG L ++ +E + H+ E + +V ++ E+ Sbjct: 496 DVNNELDRLLKNGILVQSD------TGKLTTKRLAHSEIWSIDHVREERHSVDKILTEEQ 549 Query: 961 VPGELMEK-------LTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLP 1013 + +L E+ T GQR + I T R+ V G AG GKTT ++SA+N + Sbjct: 550 IKDDLKEREQFNKFDYTEGQRNSIYSIFTTDSRYHAVDGLAGTGKTT----MLSALNKIA 605 Query: 1014 ESERPRVVGLGPTHRAVGEMRS-AGVDAQTLASF-LHDTQLQQ---RSGETPDFSNTLFL 1068 + V G+ T A + G+ + T A F ++++LQ +SG D N +++ Sbjct: 606 DKNGFIVKGMAGTGVAAKTLEEETGIPSTTTAMFKYNESKLQNNLNQSGNNFDRKNEIWI 665 Query: 1069 LDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKE 1128 +DESS G L + R V GD +QLQ+I G+PF L Q + + M+ Sbjct: 666 VDESSFAGQESFVDVLKLAKSADARVVFLGDKNQLQSIEAGKPFELLQKEMS--FSSMQN 723 Query: 1129 IVRQ-TPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKL 1187 I RQ T EL++ V + ++ + ++ E+ K + ++G SV E+ Sbjct: 724 INRQKTQELKDVVSLITAKNAKGEITLSENAKAFDLLDKQG------SVKEYDQ------ 771 Query: 1188 AEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDV 1247 + L+E +V+ Y E R +T+I+T N DR++LN ++ Sbjct: 772 ------------------LDLHEEVVKSYMSNDLEKRNKTMIITPFNSDRKILNDLVRQA 813 Query: 1248 REKAGEL-GKEQVMVPVLNTANIR--DGELRRLSTWETHR--------------DALVLV 1290 + GEL G+E N R GE+ S + R D V Sbjct: 814 KIDKGELQGEEHAFTTYANKNLTRAQQGEILEYSKGDVLRFNKTYSPEGVSFKKDEYYTV 873 Query: 1291 DNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKS 1350 Y + G K++GL+ LQD +G + + + + +Y + + GD ++ +S Sbjct: 874 IETYKQNGG-KKEEGLV-LQDKDGLQQKWNSKN--KNQIEVYEKEQKELRKGDLIKINRS 929 Query: 1351 DRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASE 1410 + E + +T + G+ + L D + + P E H D YA T + +QG ++ Sbjct: 930 NGE--FKNGEKYTFKEIQGNEIVLIDDKNQEKRMPKDEF--NHWDHGYANTIYSSQGLTK 985 Query: 1411 TFAIAL------------EGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNR 1450 T + L E N + G + YV +R ++++T ++ Sbjct: 986 TNVLMLINSNKLSNTQNSEQAIKNLGKIFGNRAFYVGATRASHDLKIFTHDK 1037 >UniRef50_Q9X4G2 Mobilization protein TraI n=10 Tax=root RepID=Q9X4G2_ECOLX Length = 1078 Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 130/356 (36%), Positives = 187/356 (52%), Gaps = 37/356 (10%) Query: 1 MMSIAQV--RSAGSAGNYYTD-KDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLE 57 M+ I + ++ S YY+D KD+YY S W G GAE LGL G V+ F LL Sbjct: 1 MLDITTITRQNVTSVVGYYSDAKDDYYSKDSSFTSWQGTGAEALGLSGDVESARFKELLV 60 Query: 58 GRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQV 117 G + + R + + R GYDLTFSAPK VSM A++ GDK +I+AH +AV AVR+ Sbjct: 61 GEIDTFTHMQRHVGDAKKERLGYDLTFSAPKGVSMQALIHGDKTIIEAHEKAVAAAVREA 120 Query: 118 EALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ-HNGEWKTLS 176 E LA R G+S T T NLV+A F H+TSR +P LHTHA V N+TQ +G+W+ L Sbjct: 121 EKLAQARTTRQGKSVTQNTNNLVVATFRHETSRALDPDLHTHAFVMNMTQREDGQWRALK 180 Query: 177 SDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP---VEA 233 +D++ + N++ G +Y+++L ++ GYE K+ ++M + A Sbjct: 181 NDELMR---------NKMHLGDVYKQELALELTKAGYELRYNSKNNTFDMAHFSDEQIRA 231 Query: 234 FSGRSQTIREAVG--------EDASLKSRDVAALDTRKSK-QHVDPEIKMAEWMQTLKET 284 FS RS+ I + + DA KSR ++ TR+ K +H EI EW K Sbjct: 232 FSRRSEQIEKGLAAMGLTRETADAQTKSR--VSMATREKKTEHSREEIHQ-EWASRAKTL 288 Query: 285 G--FDIRAYR-DAADQRADL-RTLTPGPASQDGPDVQ--QAVTQAIAGLSERKVQF 334 G FD R ++ AD+ R + P S P+V+ +A+ A+ LSER F Sbjct: 289 GIDFDNREWQGHGKPLEADIARNMAPDFTS---PEVKADRAIQFAVKSLSERDASF 341 Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 135/549 (24%), Positives = 234/549 (42%), Gaps = 92/549 (16%) Query: 940 EKSILRHILEGKEAVMP--LMERVPGELM--EKLTSGQRAATRMILETSDRFTVVQGYAG 995 E+SIL G+ MP L + G+L+ + L Q A I+ + DRF GYAG Sbjct: 446 ERSILTIESRGR-GQMPRQLTAEIAGQLLSGKTLKKEQMRAVTEIVTSKDRFVAAHGYAG 504 Query: 996 VGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVDAQTLASFLH--DTQLQ 1053 GK+ M+A +L ES+ +V L P + G+ A+T+A+FL D +L Sbjct: 505 TGKSYM---TMAAKELL-ESQGLKVTALAPYGTQKKALEDDGLPARTVAAFLKAKDKKLD 560 Query: 1054 QRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFR 1113 ++S + +DE+ ++ M + +I RAV GDT Q +A+ G+PF Sbjct: 561 EKS---------VVFIDEAGVIPARQMKQLMEVIEKHNARAVFLGDTSQTKAVEAGKPFE 611 Query: 1114 LQQTRSAADVAIMKEIVRQTPE-LREAVYSLINRDVERALSGLESVK--PSQVPRQEGAW 1170 Q ++ + MK+I RQ E L EAV + RAL + V + PR Sbjct: 612 -QLIKAGMQTSYMKDIQRQKNEVLLEAVKYAAEGNAARALKNITGVNELKEEAPRL---- 666 Query: 1171 APEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIV 1230 A+LA+ Y + E ++ TLI+ Sbjct: 667 --------------AQLADR-------------------------YLSLSSEQQDATLII 687 Query: 1231 THLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLV 1290 + N R+ LN I R G G + +L+ + E RR S + + + +++ Sbjct: 688 SGTNASRKTLNDYI---RGNLGLAGTGETFT-LLDRVDSTQAE-RRDSRYFS-KGQIIIP 741 Query: 1291 DNVYHRIAGISKDDGLITLQDAEGNTRLI----------SPREAVAEGVTLYTPDTIRVG 1340 + Y G+ + + L GN + SPR +++Y + + Sbjct: 742 EQDYKN--GMKRGESYQVLDTGPGNKLTVESISGEQIAFSPRTHTK--LSVYQAVSAELA 797 Query: 1341 TGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAI 1400 GD++ T++D+ +TV V G+ +TL D ++ R + ++QA ++ AYA Sbjct: 798 PGDKVMVTRNDKTLDVANGDRFTVKTVEGEKLTLED-KKGRTVELDKKQA-SYLSYAYAT 855 Query: 1401 TAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNA 1460 T H +QG + + T + L + YV +SR + V+++TD+++ +++ Sbjct: 856 TVHKSQGLTCDRVLFNIDT---KSLTTSKDVFYVGISRARHEVEIFTDDKKSLASSVSRD 912 Query: 1461 VQKGTAHDV 1469 K TA ++ Sbjct: 913 SPKTTAAEI 921 >UniRef50_C5ANZ1 TrwC protein n=2 Tax=Burkholderia glumae BGR1 RepID=C5ANZ1_BURGB Length = 973 Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 119/305 (39%), Positives = 163/305 (53%), Gaps = 29/305 (9%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGER--WAGRGAEQLGLQGSVDKDVFTRLLEG 58 MMS+ V SAG A +Y++ KDNYY ER W G+GA LGL G VD+ F LL G Sbjct: 1 MMSMHNVGSAGQALHYFS-KDNYYTTEQGLERSQWFGKGAAALGLDGQVDEKEFFELLSG 59 Query: 59 RLPDGADLSRMQDGSN-----RHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFA 113 R+ G L R+ N HRPG DLTFSAPKSVS+ A + D ++ AH +AV A Sbjct: 60 RVA-GKQLGRVVRDDNGQPDWVHRPGIDLTFSAPKSVSIAAEVFEDHQVRLAHEEAVKEA 118 Query: 114 VRQVEALAS-TRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVT-QHNGE 171 + VE A+ R DG++ T TGN+V ALF H+TSRD +P HTHAV+ N T + +G+ Sbjct: 119 LEYVEEYAAQARKTVDGETITEETGNIVAALFRHNTSRDLDPDTHTHAVILNATRREDGQ 178 Query: 172 WKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP- 230 W+ L++D+ +Y Q G +Y L ++ GY K+G +E+ GV Sbjct: 179 WRALTNDE---------LYLQQKVIGAVYTASLARALQKRGYAITAPDKNGNFELVGVTR 229 Query: 231 --VEAFSGRSQT---IREAVGED---ASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLK 282 +E FS RS A G D A+ ++ A L TR+ K+ VD + W + + Sbjct: 230 EQIEHFSQRSAARDRWLRANGIDPANATPAEKERAVLATRERKRDVDHGVLSQTWRERAQ 289 Query: 283 ETGFD 287 G D Sbjct: 290 SVGLD 294 Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 139/517 (26%), Positives = 229/517 (44%), Gaps = 79/517 (15%) Query: 970 TSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVV-GLGPTHR 1028 T+GQRAA + L + DR VQG AGVGKTT + + + ER VV G+ T + Sbjct: 435 TTGQRAAIELALTSEDRIVAVQGLAGVGKTTMVKGTVQVAH-----ERGYVVRGMAATGK 489 Query: 1029 AVGEMRS-AGVDAQTLASF-LHDTQ----LQQRSGETPDFSNT--LFLLDESSMVGNTDM 1080 A ++ + G++A T+ F +H+ + L+ PD L+L+DESS + M Sbjct: 490 AALQLAADGGINADTVTMFEIHEQRRQDDLKLLHEYVPDMKREPELWLVDESSFLAQRQM 549 Query: 1081 ARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQ-TPELREA 1139 AR + + + GD QLQAI G+PF + Q A+M +I RQ PEL++A Sbjct: 550 ARLIKMAERAEAKVILLGDKLQLQAIEAGKPFEVLQDEGLT-TALMTQIQRQRNPELQQA 608 Query: 1140 VYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGE 1199 V + AP+ +T S+ A+ + ++A E Sbjct: 609 VAITVG---------------------TADLAPDEELTSLDLSRNARAFDFLEQAGRVIE 647 Query: 1200 AFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQV 1259 PD L + + R Y R + R +T+I+T NEDR +N+ I + GEL ++ Sbjct: 648 -IPDGEQ-LVQNLARRYVERG-DRRNETIIITPFNEDRVNINNAIRSQLQARGELDTQES 704 Query: 1260 MVPVLNTAN----IRDGELRRLSTWETHR-----DALVLVDNVYHRIAGISKDDGLITLQ 1310 + + + + E + +T T R ++ Y + D+G++ L+ Sbjct: 705 DHTIFRSESEMTRAKQKEAQYYTTDMTVRFGRDYQKILAARGEYMTVVATRPDEGIVVLR 764 Query: 1311 DAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDR--ERGYVANSVWTVTAVS 1368 A+G+ P++ V +Y + + D +RFT+ D + G+ A TV ++ Sbjct: 765 KADGSLMEWEPKK--YNRVEIYLSEERALAARDVIRFTRGDELVKNGHEA----TVVSIQ 818 Query: 1369 GDS--VTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEG----- 1421 G + L+DG++ P A++H D AYA+T H QGA+ AI +E Sbjct: 819 GSQAILRLADGKEI----PWDLDAQRHWDHAYAVTVHAGQGATREQAILHIPSEKLGRDP 874 Query: 1422 -----------NRKLMAGFESAYVALSRMKQHVQVYT 1447 + + G S YV ++R +Q+YT Sbjct: 875 DDPRRQSDIAMTVRRIFGDRSFYVGITRAVDDLQIYT 911 >UniRef50_UPI00016ACDBF TrwC protein n=1 Tax=Burkholderia thailandensis MSMB43 RepID=UPI00016ACDBF Length = 941 Score = 166 bits (420), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 122/372 (32%), Positives = 185/372 (49%), Gaps = 53/372 (14%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGER--WAGRGAEQLGLQGSVDKDVFTRLLEG 58 M+S+ V +A A Y+ KDNYY E W G+GA LGL G V F LLEG Sbjct: 1 MLSLHNVSNAAQAQTYFA-KDNYYTQDENAEHSAWFGKGAATLGLSGKVTPAQFMNLLEG 59 Query: 59 RL---------PDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQA 109 R+ D R Q+ H+PG DLTFSAPKSVS++A + GDK + AH +A Sbjct: 60 RVGEQQLGKWVTDEKTCERRQE----HQPGIDLTFSAPKSVSLLAEVAGDKDVRAAHERA 115 Query: 110 VDFAVRQVE-ALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ- 167 + A+ +E + TR +G + TGN+++A+F H+TSRD +PQ HTHAV+ N TQ Sbjct: 116 AEVALTYIEEQVIRTRATKNGVTSLEYTGNMIVAMFRHNTSRDLDPQTHTHAVLINATQR 175 Query: 168 HNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMP 227 +G+W+++ + +Y Q G +Y +L ++ +GY K+G +E+ Sbjct: 176 EDGQWRSIDN---------REIYQIQKLAGAIYNAELAGGLQQIGYRLTNPDKNGNFEIQ 226 Query: 228 GVP---VEAFSGRSQTIREAVGED------ASLKSRDVAALDTRKSKQHVDPEIKMAEWM 278 GV +E FS R ++E + + AS ++ AAL TR K+ VD + + +W Sbjct: 227 GVSREQIEHFSQRRAAMKEVLEKQNTTLDAASAAEKERAALATRDRKKDVDHQELLDDWN 286 Query: 279 QTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQ------AVTQAIAGLSERKV 332 +E D+ R A +R +DG + Q A++ A A L ER+V Sbjct: 287 ARAEEHDIDLDGLRAATAKR-----------KEDGIGIPQRLTGRDAMSFAAAQLIEREV 335 Query: 333 QFTYTDVLARTV 344 D++ + Sbjct: 336 AVDKIDLVKTAI 347 Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 161/628 (25%), Positives = 271/628 (43%), Gaps = 90/628 (14%) Query: 867 AIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGY 926 A+ A + +++A +DL+ A G E+ + K+GDL+ + K Sbjct: 322 AMSFAAAQLIEREVAVDKIDLVKTAIEHGTGRVGAREVLSAFDDLEKKGDLIALPDDK-- 379 Query: 927 GTGLLVSRASYEAEKSILRHILEGKEAVMPLM------ERVPGELMEK---LTSGQRAAT 977 +R +++E+ + + + K+ ++ +R+ E+ +GQ+ A Sbjct: 380 ----YTTRKMFQSERWAIDFVRQQKDRAPIVLDAATVTQRIAASEKEQPFPYATGQKDAI 435 Query: 978 RMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM-RSA 1036 + L + DRF VQG AG GKTT R + N + SE V G+ PT A M + Sbjct: 436 VLALTSPDRFVAVQGLAGTGKTTMLRTL----NDIAVSEGYVVRGMAPTGAASKIMVKET 491 Query: 1037 GVDAQTLASF-LHDTQLQQR----SGETPDFSN--TLFLLDESSMVGNTDMARAYALIAA 1089 G+ A T+A F + + QLQ+ PDF L+++DESS + +A+ + L Sbjct: 492 GIAADTVAMFQIKERQLQKDIEFAKQFAPDFVRRPELWVVDESSFLAQRQLAQIHNLAEK 551 Query: 1090 GGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQ-TPELREAVYSLINRDV 1148 + V GD QLQ + G+PF L Q A A M EI RQ TP +++AV + R++ Sbjct: 552 ANAKVVYLGDKLQLQGVEAGKPFELAQGHGIA-TAHMTEINRQKTPHMQKAVDIITGRNL 610 Query: 1149 ERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTL 1208 +A L ++ + + A + VTE E L +A+ + Sbjct: 611 LKAGERLTDIELKRNLQSFDYLARQGKVTE----TEDVLGDAKSR--------------- 651 Query: 1209 YEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNT-- 1266 Y +PE R ++++T LN+DR LN I EL + + +L + Sbjct: 652 -------YFAMSPEERAASIVITPLNKDRVSLNDDIRAEMWARRELKGRESALEILVSKG 704 Query: 1267 ---ANIRD------GELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTR 1317 A I++ G++ R + DA Y R+ G+ + G++T++ +G TR Sbjct: 705 WTRAMIKEAQYYTPGDVVRFNRDYQQIDA---SKGDYARVLGVDHELGVVTIEKRDG-TR 760 Query: 1318 LISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTL--S 1375 L A V +Y + ++ GD +R T++D + V + G L S Sbjct: 761 L-DWEPAKHNKVEVYDREQRQLAVGDVIRLTRNDDT--FKNGETAKVIGLQGGLAVLEVS 817 Query: 1376 DGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASET---FAIAL-----EGTEGNRKLMA 1427 D T + QH D AY T H AQGAS+ F I + E + +++A Sbjct: 818 DKAATSHHHVNLNTS-QHWDHAYTSTIHAAQGASKAQVIFVINMPDIDPEKPKQAEQMLA 876 Query: 1428 GF------ESAYVALSRMKQHVQVYTDN 1449 GF S YV ++R + + + T++ Sbjct: 877 GFAKVFGDRSYYVGVTRASRDIAIVTND 904 >UniRef50_A3VN00 TrwC protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VN00_9PROT Length = 994 Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 111/291 (38%), Positives = 156/291 (53%), Gaps = 36/291 (12%) Query: 20 KDNYYVLGSMG---ERWAGRGAEQLGLQGSVDKDVFTRLLEGRLPDGADLSRM------Q 70 KDNYY G W G+GA LGL+G V+ + F R+L G DG + + Q Sbjct: 20 KDNYYAKGGDAPEPSSWFGKGAASLGLKGGVETETFERVLNGETLDGRRVGQREGETAEQ 79 Query: 71 DGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVE-ALASTRVMTDG 129 + HRPG DLTFS PK VS++ +GGDKR++ AH AVD ++ E LA TR+ T G Sbjct: 80 AQARAHRPGIDLTFSPPKDVSLLLYIGGDKRILGAHRAAVDQTLKWAERNLAGTRIRT-G 138 Query: 130 QSET--VLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ-HNGEWKTLSSDKVGKTGFI 186 S T V TGNLV+A F HD SRD++PQLHTHAV+AN+T+ +G W+ L +D Sbjct: 139 PSATPAVKTGNLVIARFEHDISRDKDPQLHTHAVIANITKTDDGRWRALHNDP------- 191 Query: 187 ENVYANQIAFGRLYREKLKEQVEALGYETEVV-GKHGMWEMPGVP----VEAFSGRSQTI 241 +A++ Y L+ + LGY ++ GK G + + GVP E G+ + Sbjct: 192 --FFAHRKTLSLAYDATLRNALRELGYRVKLEDGKSGRYSVDGVPDGARAEFSKGKDRID 249 Query: 242 REAVG-EDASLKSRDVAALDTRKSKQHVDPEIKM-------AEWMQTLKET 284 AVG + + +RD A+ TR +K + E ++ A W TL+ T Sbjct: 250 SAAVGLKHPTPSARDKLAVKTRPAKDELRQEERVALRETRGAPWKATLEHT 300 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 152/615 (24%), Positives = 267/615 (43%), Gaps = 82/615 (13%) Query: 864 AQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVA 923 A+ A+ L E ++ AFS+ + A AA+G ++ E+ + R + + A Sbjct: 366 ARAAVSFGLRHHEEREAAFSLHHVRRTALEHAADGVTLRDIDREL--RFLRANRKLLVNA 423 Query: 924 KGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEK------LTSGQRAAT 977 K R+ E+++ +L+ PL VP + + LT GQ+AA Sbjct: 424 KDPNAESTTKRSLTHEERTL--SLLQDAGRTGPL---VPEQTLRSALESTHLTGGQKAAI 478 Query: 978 RMILETSDRFTVVQGYAGVGKTTQFRAVMS-AVNMLPESERP--RVVGLGPTHRAVGEMR 1034 +IL +R VQGYAG GKTT R + A ++ P +++ +V+GL PTH A + Sbjct: 479 GLILGGPNRLVGVQGYAGTGKTTMMRQTAALARDLAPLAKKDGYKVLGLAPTHSARKTLE 538 Query: 1035 -SAGVDAQTLASFLHDTQLQQRSGET--PDFSNTLFLLDESSMVGNTDM-ARAYALIAAG 1090 S G D++T+++FL + G T PD NT+ L+DE+S + +M A LIA Sbjct: 539 ESGGFDSRTVSAFLREA-----GGGTLPPDIKNTIVLIDEASFLSTRNMNALLERLIALK 593 Query: 1091 GGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVER 1150 + V SGD Q A+ G+PF + Q R+ AIMK+IVR Sbjct: 594 PAKIVLSGDRRQHGAVEAGRPFDIAQ-RAGLPTAIMKDIVR------------------- 633 Query: 1151 ALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYE 1210 +P+ EG +V + + K+A A ++ G + P L Sbjct: 634 ------------LPKDEGHRDQRAAVEA---AAQGKVAVAMKRL---GANIVERPGNLAG 675 Query: 1211 AIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIR 1270 V + + +++ L+V + R +N I G L E + + VL + N+ Sbjct: 676 GAVEAWRALPKDKQDKALLVAPSHRLREAINQGIRSELIANGRLSAETMTISVLRSKNLT 735 Query: 1271 DGELRR--------LSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLI--S 1320 E + + DA+ N + + ++ G +TL++A G + + S Sbjct: 736 RAEAMSPRSYAAGDILQFHARLDAINAKKNTRRLVTAVDEERGRLTLRNARGKDQTVPLS 795 Query: 1321 PREAVAEGV--TLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQ 1378 + E +L+ + + + GD + FT+S+ + G A V + V+L+ Sbjct: 796 RLQGRYENTPYSLHREEPLELRRGDSVMFTRSNPDAGLSAMDAAKVVGWDQERVSLNVSG 855 Query: 1379 QTREIRPGQEQ-AEQHIDLAYAITAHGAQGASETFAIA-LEGTEGNRKLMAGFESAYVAL 1436 R+ G++ A + + YA+T+H AQG + +A ++ E GF YV++ Sbjct: 856 TQRQF--GRDDPALRSLTHGYAMTSHAAQGRTAKDVVAVMDSKERALTSQVGF---YVSI 910 Query: 1437 SRMKQHVQVYTDNRQ 1451 SR + + ++++ Sbjct: 911 SRSADTLALIVNDKE 925 >UniRef50_B2I3X3 TrwC protein n=1 Tax=Acinetobacter baumannii ACICU RepID=B2I3X3_ACIBC Length = 716 Score = 162 bits (411), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 115/320 (35%), Positives = 166/320 (51%), Gaps = 35/320 (10%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMG---ERWAGRGAEQLGLQG-SVDKDVFTRLL 56 M+S+ V +G A +YY DNYY W GRGA+ LG+ G ++ ++F LL Sbjct: 1 MLSVNNVVESGKALSYY-QLDNYYTNEQQSLDQTEWYGRGAQVLGINGEQIEANIFKDLL 59 Query: 57 EGRLPDGADLSRMQDGSN-----RHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVD 111 EGR+ D L R++ N HR G DLTFSAPKSVS+MA + ++ ++ AH AV Sbjct: 60 EGRVED-QQLGRVRKDENGQSYIDHRAGIDLTFSAPKSVSIMAEVFENQDVLQAHLDAVK 118 Query: 112 FAVRQVE-ALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNG 170 + +E TR+ DG + + NLV+ALFNH+TSR +PQ HTHAVV N+T ++ Sbjct: 119 DTISAIEDHYTQTRISVDGTIQKSESDNLVVALFNHNTSRALDPQTHTHAVVMNMTLNDK 178 Query: 171 E-WKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGV 229 + W LS+ E +Y NQ G +Y L + + A+G + EV G +E+ G Sbjct: 179 DSWTALSN---------EVIYDNQATIGSIYNSNLAQNLRAIGLDVEVKDNQGNFEIAGF 229 Query: 230 P---VEAFSGRSQTIREAVG------EDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQT 280 ++ FS R I E++ EDA R+ AAL TR+ KQ + AE Q Sbjct: 230 TPEMIQEFSQRRTQIIESLKSRGIDIEDAPASLREQAALKTRERKQAFNE----AELRQV 285 Query: 281 LKETGFDIRAYRDAADQRAD 300 KE ++ + D+ D Sbjct: 286 WKERASELGITQSFVDKLED 305 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 74/290 (25%), Positives = 133/290 (45%), Gaps = 24/290 (8%) Query: 856 QKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRG 915 Q+ + ++A++ A+ +++ +L A F + ++ E+N K Sbjct: 433 QQVLISQKTKEAVYYAIGHHTEREMMIPETKILNTAMKFDIQEVTHEQVRAELNRLEKEK 492 Query: 916 DLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLME--RVPGELME------ 967 ++ VD G L ++ +E L+HI +++V P+++ +V L + Sbjct: 493 IIVRVD-------GKLTTQRLAHSEVWSLQHIQNEQKSVSPIVDESQVKTRLDQEEQLRG 545 Query: 968 -KLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPT 1026 K T GQRA+ I + R+ V G AG GKTT ++ +N + V G+ T Sbjct: 546 RKFTPGQRASLETIFSSESRYIGVDGLAGTGKTT----MLHTLNKVASENGFIVKGMAAT 601 Query: 1027 HRAVGEMR-SAGVDAQTLASF-LHDTQLQQRSGET--PDFSNTLFLLDESSMVGNTDMAR 1082 A + G+ ++T+A F + + +LQ+ + + N ++++DESS V T+ Sbjct: 602 GVAAKNLELETGIPSKTMAMFQIKENELQKEIEKNGGVNRKNEIWIVDESSFVSQTNFKD 661 Query: 1083 AYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQ 1132 L R V GD QLQ+I+ G+PF L Q R + M +I+RQ Sbjct: 662 ILTLAKQANSRVVFLGDKLQLQSISAGKPFELVQNRGVLKTSQMHDIIRQ 711 >UniRef50_A8ZPV0 Putative uncharacterized protein n=1 Tax=Acaryochloris marina MBIC11017 RepID=A8ZPV0_ACAM1 Length = 2018 Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 201/783 (25%), Positives = 337/783 (43%), Gaps = 113/783 (14%) Query: 32 RWAGRGAEQLGLQGSVDKDVFTRLLEGRLPDGADLSRM-QDGSNRHRPGYDLTFSAPKSV 90 +W G GA LGLQG+V + F ++ G +G L ++ ++ R G D TFS PKS Sbjct: 38 QWYGYGAYALGLQGNVHRADFKKVFYGYNLEGERLRGFPKNEKHKERVGDDFTFSMPKSA 97 Query: 91 SMMAMLGGDKRLIDAHNQAVDFAVRQV-EALASTRVMTDGQSETVLTGNLVMALFNHDTS 149 SM+ +G D RL DAH QAV + V E TRVM G T+ T NLV+AL NH TS Sbjct: 98 SMVLHIGCDYRLFDAHLQAVKRTLDIVQERYGQTRVMIGGVRHTLNTKNLVIALINHHTS 157 Query: 150 RDQEPQLHTHAVVANVTQH-NGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQV 208 R +PQ+HTHA+V N TQ +G W++ +D + Q G++YR+ L E + Sbjct: 158 RANDPQVHTHALVMNTTQMPDGTWRSRKND----------LMYMQECLGQIYRQYLAENI 207 Query: 209 EALGYETEVVGKHGMWEMPGVP---VEAFSGRSQTIREAVGED---ASLKSRDVAALDTR 262 + LGY ++ +E+ G+ VE FS RSQ I + + +D A+ ++ A L +R Sbjct: 208 QNLGY--KIYATKDAFEIEGITREQVETFSKRSQQIFKQLEKDGLEATTANKQTACLKSR 265 Query: 263 KSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTP--GPASQDGPD-VQQA 319 K+K +P K+ D++A A Q D R P P + PD V A Sbjct: 266 KAK---EPGQKLT-----------DLQAVWQQAAQTLDYRMPQPDLSPQFEYRPDQVTTA 311 Query: 320 VTQAIAGLSERKVQFTYTDVLARTVG-ILPPENGVIERARAGIDEAIS-REQ-------- 369 + AI LSER + FT + G I I +A + +E ++ R+Q Sbjct: 312 LHSAINHLSERSITFTREQIEQFVFGNIRQFRFEDISQAMSACEELLTLRDQVNNTERFT 371 Query: 370 -LIPLDREKGLFTSG-------IHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYSD 421 + L+RE + S ++ E SV R+++K++ + V ++V +T +SD Sbjct: 372 TVAALEREAAIHQSWDLGRQTQTPLMSEYSV----RELLKESGLNVGQLEAVAKTLAHSD 427 Query: 422 AVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDER 481 + G G G+ + +L + ++Q A ++ + ++ Sbjct: 428 ----------QFILWHGLAG-VGKTRTLGQLKQVLTHLNLDIQGYAPTTKASKVLGKE-- 474 Query: 482 LSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLI---TDSG 538 L + T + L+ + P IVD+ + ++ L LL A N +VL T Sbjct: 475 LGIKTNTVAKLLVSKPSLAPHQLWIVDEAGMIGSQQMLELLGRARAANARVLFVGDTKQN 534 Query: 539 QRTGTGSALMAMKDAGVNTYRW-------QGGEQRPATIISE------------------ 573 GS + ++ AG T+ ++R ++I++ Sbjct: 535 PSITAGSPMRSLIRAGATTFHISQIVRQRNTVQKRAVSLIAKGQGLNAVSLLKEHGYIQE 594 Query: 574 -PDRNVRYARLAGDFAASVKAGE--ESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVT 630 D ++R A D+ + E E++ +E+ + +R LK +G LG + Sbjct: 595 IKDEDIRQQTFA-DYYLQLSPEERAETLLVTGTNKERLAIMSLLRQGLKAEGTLGEEDHH 653 Query: 631 MTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRS----HDR-YVIDRVTAQSHSLTLRD 685 + L+ L + L Y+ G ++ RS D+ Y ++R L + Sbjct: 654 IQQLASRHLTIEQKRLVQFYQVGDYIQLQKKNYRSTPLQKDKLYRVERRLGD--ELLVSS 711 Query: 686 AQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAM 745 + G S ++ + + VA G+ LR T + S GD ++V ++ + Sbjct: 712 SGGRLYHFNPSKYKHK-EVYEVQNLNVAVGDDLRWTHNNKEQKWSNGDEVKVVAIEGSTL 770 Query: 746 TVV 748 V+ Sbjct: 771 HVI 773 Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 132/554 (23%), Positives = 232/554 (41%), Gaps = 81/554 (14%) Query: 935 ASYEAEKSILRHILEGKEAVMPLM-ERVPGELMEK--LTSGQRAATRMILETSDRFTVVQ 991 A+ E E +I + G++ PLM E EL+++ L GQ A L SD+F + Sbjct: 374 AALEREAAIHQSWDLGRQTQTPLMSEYSVRELLKESGLNVGQLEAVAKTLAHSDQFILWH 433 Query: 992 GYAGVGKTT---QFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM-RSAGVDAQTLASFL 1047 G AGVGKT Q + V++ +N+ + G PT +A + + G+ T+A L Sbjct: 434 GLAGVGKTRTLGQLKQVLTHLNL-------DIQGYAPTTKASKVLGKELGIKTNTVAKLL 486 Query: 1048 HDTQLQQRSGETPDFS-NTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAI 1106 P + + L+++DE+ M+G+ M A R + GDT Q +I Sbjct: 487 ---------VSKPSLAPHQLWIVDEAGMIGSQQMLELLGRARAANARVLFVGDTKQNPSI 537 Query: 1107 APGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQ 1166 G P R R+ A + +IVRQ +++ SLI + GL +V Sbjct: 538 TAGSPMR-SLIRAGATTFHISQIVRQRNTVQKRAVSLIAKG-----QGLNAVS------- 584 Query: 1167 EGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQ 1226 + E + QE K + +Q + F D + L +PE R + Sbjct: 585 --------LLKEHGYIQEIKDEDIRQ------QTFADYYLQL-----------SPEERAE 619 Query: 1227 TLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDA 1286 TL+VT N++R + S++ + G LG+E + L + ++ E +RL + D Sbjct: 620 TLLVTGTNKERLAIMSLLRQGLKAEGTLGEEDHHIQQLASRHLTI-EQKRLVQFYQVGDY 678 Query: 1287 LVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISP--------REAVAEGVTLYTPDTIR 1338 + L Y R + KD L ++ G+ L+S + + +Y + Sbjct: 679 IQLQKKNY-RSTPLQKDK-LYRVERRLGDELLVSSSGGRLYHFNPSKYKHKEVYEVQNLN 736 Query: 1339 VGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQ-QTREIRPGQEQAEQHIDLA 1397 V GD +R+T +++E+ + V A+ G ++ + D + Q R I +D A Sbjct: 737 VAVGDDLRWTHNNKEQKWSNGDEVKVVAIEGSTLHVIDEEGQHRTISLDHPVC---LDYA 793 Query: 1398 YAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAI 1457 TAH AQG S + + E YV +SR + +Y + + + + Sbjct: 794 LVHTAHRAQGQSRKRVV----ISSTNDPTSSKEPFYVKISRQSHEIVIYCQSFKKLDERV 849 Query: 1458 NNAVQKGTAHDVFE 1471 + ++ + A ++ + Sbjct: 850 SESIAQDNATELLK 863 >UniRef50_B1X2J5 Putative TrwC/TraI protein n=1 Tax=Cyanothece sp. ATCC 51142 RepID=B1X2J5_CYAA5 Length = 1053 Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 109/319 (34%), Positives = 167/319 (52%), Gaps = 37/319 (11%) Query: 33 WAGRGAEQLGLQGSVDKDVFTRLLEGRLPDGADLSRMQDGSNR---HRPGYDLTFSAPKS 89 W G+GA +LGL G + ++ F + G P+ + R ++ NR R G DLTFSAPKS Sbjct: 47 WYGQGASELGLSGPIQQEDFKSVFYGFQPNADETIRRKN--NRFGTERLGDDLTFSAPKS 104 Query: 90 VSMMAMLGGDKRLIDAHNQAVDFAVRQVEA-LASTRVMTDGQSETVLTGNLVMALFNHDT 148 VS+ +G D R+ DAH AV + +VE A TR+ G E V T NL +A+ H T Sbjct: 105 VSIALHVGNDLRIFDAHTDAVKEVLDEVEKRYAQTRISKKGNREIVNTNNLTVAMIPHHT 164 Query: 149 SRDQEPQLHTHAVVANVTQ-HNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQ 207 SRD +PQLHTHA V N T+ +G+W++L + + + ++ G LYR+KL + Sbjct: 165 SRDGDPQLHTHAFVMNGTKGPDGKWRSLYHEGMSHSQWL----------GSLYRQKLATK 214 Query: 208 VEALGYETEVVGKHGMWEMPGV---PVEAFSGRSQTIREAV---GEDASLKSRDVAALDT 261 ++ +GY E+ +E+ G+ ++ FS RSQ I +++ G + + +RDVA L T Sbjct: 215 LQDIGY--ELRETKDSFELAGINKQQIQGFSKRSQQIIKSIQKRGLEVTPSNRDVATLTT 272 Query: 262 RKSKQHVDP-EIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAV 320 RKSKQ + +W + G + +TL P G Q+A+ Sbjct: 273 RKSKQRTATLQAFQTQWKAESIKMGIKV----------PQAKTLNPSSYLGYGSS-QEAL 321 Query: 321 TQAIAGLSERKVQFTYTDV 339 AIA L +++V F+ D+ Sbjct: 322 DSAIANLEQKQVSFSREDI 340 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 122/568 (21%), Positives = 236/568 (41%), Gaps = 108/568 (19%) Query: 864 AQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVA 923 +Q+A+ A+ +E K+++FS D+ ++ S +I+R D+ +D + Sbjct: 317 SQEALDSAIANLEQKQVSFSREDIYRDSFS-----------------RIQRFDIAQLDQS 359 Query: 924 KGYGTGLL------VSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAAT 977 LL + + + E ++ + EG+ +V PL E+ E L GQ A Sbjct: 360 INGHDKLLGIEDNFTTLTAIKNESNLRQQWDEGQHSVQPLSHNEMKEI-ENLNPGQTEAL 418 Query: 978 RMILETSDRFTVVQGYAGVGKTTQFRAVM-SAVNMLPESERPRVVGLGPTHR-AVGEMRS 1035 R L + D + +VQG +F+ + VN L +S+ +V PT AV + Sbjct: 419 RQTLASEDAYQIVQG-------IRFKPFIGELVNQLKDSQ-IKVEVYSPTETGAVTLQKG 470 Query: 1036 AGVDAQTLASFLHDTQLQQRSGETPDFSN-TLFLLDESSMVGNTDMARAYALIAAGGGRA 1094 +DA T+ + +G++ +F N L+++DE+ + + M + R Sbjct: 471 YSIDADTVDN----------AGDSDNFGNHQLWVIDEAESLDLSQMRDLLKRANSEQARL 520 Query: 1095 VASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSG 1154 V G + I G P R A +KEI++++ E LIN D R+ Sbjct: 521 VLVGGNNS--DIKRGSPLR-SLMDHGAKTHSLKEIIKESKTDIEQAACLIN-DGHRS-DA 575 Query: 1155 LESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVR 1214 +E + + + E ++ A+ + F D+ I Sbjct: 576 VELL-----------------------NNNGYVHEVEETALHEAHRFADLS-----EIAS 607 Query: 1215 DYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVL---------- 1264 +Y +P + QTLI+T +ED+ + I + +G+LG E V V L Sbjct: 608 EYLALSPTEQAQTLIITDSDEDKDAIIQEIRSQMKASGQLG-ESVTVAQLIPKNLSKEQR 666 Query: 1265 -NTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPRE 1323 + +N ++G+ RL ++ ++ D +Y ++ + ++D LQ + RL + Sbjct: 667 QDISNYQEGDYFRLK--RDYKKTPLIKDKLY-QVLEVREND----LQVSSLGGRLYNFDP 719 Query: 1324 AVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREI 1383 + + + ++ ++ + GDR++ T +D+ G ++ +TV A+ ++ L D + Sbjct: 720 SEYKDIEVFGSSSVEIAIGDRIQATANDKTSG-LSKKQFTVKAIDDGNMVLRDYKDN--- 775 Query: 1384 RPGQEQAEQHIDLAYAITAHGAQGASET 1411 EQ I L++ + SET Sbjct: 776 -------EQSISLSHPLPIERIDAGSET 796 >UniRef50_Q30Q32 ATP-dependent exoDNAse (Exonuclease V) alpha subunit-helicase superfamily I member-like protein n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30Q32_SULDN Length = 1112 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 137/541 (25%), Positives = 246/541 (45%), Gaps = 98/541 (18%) Query: 940 EKSILRHILEGK-----EAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYA 994 E+ IL + E K E + E+ E +T+GQ+ A +L + D +QG A Sbjct: 389 EREILTYAQESKNTAQAETTLDKAEQFLSENFSTMTAGQKEAFSHVLTSKDAILGIQGDA 448 Query: 995 GVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM-RSAGVDAQTLASFLHDTQLQ 1053 GVGKT +AV + ++ ++GL PT++A E+ + +G+ QT+ SF+H Q + Sbjct: 449 GVGKTFMLKAVKEFQKL---HKKDNLIGLAPTNKAADEISKESGIKGQTIDSFIHQRQHK 505 Query: 1054 QRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFR 1113 Q N + ++DE+SMV + M + + + V GDT Q +I G F Sbjct: 506 Q---------NQIIIVDEASMVDSRKMQKLTDIAQQTNSKLVLMGDTKQFTSIGAGAIFE 556 Query: 1114 LQQTRSAADVAIMKEIVR-QTPELREAVYSLIN-RDVERALSGLESVKPSQVPRQEGAWA 1171 Q + A +VA+M E +R +T +++E +Y L + + L LES Sbjct: 557 QLQAKGAIEVAVMAESMRAKTADMKE-LYKLTKEQKTDAVLDILES-------------- 601 Query: 1172 PEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVT 1231 F + Y ++V++Y + ++ TL++ Sbjct: 602 --------------------------KNQFQTIEAEDYSSVVKEY----LQDKDNTLLLV 631 Query: 1232 HLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVD 1291 N+ R+ LN +I D +K + Q++ +I+ E ++L + H V Sbjct: 632 MKNQTRQELNELIRDELKKDNSISSHQIL-------HIQ--EKQQLDSISVHHYTSYEVG 682 Query: 1292 NVYHR---------------IAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDT 1336 ++ + IA ++++ ITLQDA+GN++ ++ E + + LY Sbjct: 683 DMVQQAGSYKGSLKSGTEAVIASVNEELNSITLQDAKGNSKEVNLGEH-GDKLNLYKTTQ 741 Query: 1337 IRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDL 1396 D++ FTK D+ G + TV + +T+ G+ +EI+ ++ +ID Sbjct: 742 KEFSQNDKIIFTKKDKSLGLNNGDIGTVKEIKDGFLTVDTGK--KEIKINTKEY-NYIDH 798 Query: 1397 AYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDA 1456 AYAIT H AQG + +I + G+ +L + + YVAL+R K H+ +YT +++ + DA Sbjct: 799 AYAITNHKAQGQTSERSIFV----GDSRLSSQ-NAFYVALTRAKAHISIYTQDKEQFRDA 853 Query: 1457 I 1457 + Sbjct: 854 V 854 Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 195/926 (21%), Positives = 392/926 (42%), Gaps = 128/926 (13%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYY----------VLGSMGERWAGRGAEQLGLQGSVDKD 50 MMSI+ +S+ A NY+ +YY + G M R+ + + Q ++ K+ Sbjct: 1 MMSISSWQSSAQAENYFQQDLDYYQKNQELGEWHITGEMSNRY-----QNIAHQSAITKE 55 Query: 51 VFTRLLEGRLPDGADLSRMQ---DGSNRHRPGYDLTFSAPKSVSMMAMLGGD---KRLID 104 + D ADL + + R G+D+TFS KS+ ++ + D K ++ Sbjct: 56 SY--------QDFADLINQNLKGNATGNQRAGFDITFSPSKSIDVIYAVANDELKKSILQ 107 Query: 105 AHNQAVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVAN 164 A ++AV+ A+ + + R+ + E L +A F H ++R++E ++HTH +AN Sbjct: 108 AQDRAVNLALEKASRYITYRMRNENGREHFQNNGLAIAKFQHLSNRNEEIKIHTHCFIAN 167 Query: 165 VTQHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVG-KHGM 223 T N + + +S D + +Y NQ ++Y ++L ++++ LG+++EV+ + + Sbjct: 168 QTI-NSKGELVSIDN-------KQLYDNQKLITQIYHQELFQEMQKLGFQSEVLDIQKDI 219 Query: 224 WEMPGVPVEA---------------FSGRSQTIREAVGEDASLKSRDVAALDTRKSKQ-H 267 E+ GV EA R + +R+ + S + R +A L+TR KQ H Sbjct: 220 LEIKGVTQEARNSISTRTAEIEKWLLENRKELLRKYPNANES-QLRQIATLETRNYKQSH 278 Query: 268 VDPEIKMAEWMQT--LKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIA 325 E++ E ++ TGF ++ Q +L S D +TQ A Sbjct: 279 SYSELEEIELKNKNLVENTGFT----KETIHQIQNLEKSNQKILSLD------ELTQKAA 328 Query: 326 GL-SERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSG- 383 L +E + FT ++L+R + + ++ + + ++ A+ +I LD + ++T+ Sbjct: 329 QLTTEHESTFTSEEILSRAIKLNAIQSYTYD--LSTLENAVLNSDIIKLD--ENIYTTQE 384 Query: 384 -IHVLDELSVRALSRDIMKQNRVTVHP------EKSVPRTAGYSDAVSVLAQDRPSLAIV 436 I++ E+ A Q T+ E TAG +A S + + AI+ Sbjct: 385 MINIEREILTYAQESKNTAQAETTLDKAEQFLSENFSTMTAGQKEAFSHVLTSKD--AIL 442 Query: 437 SGQGGAAGQRERVAELVMMAREQGREVQII--AADRRSQMNMKQDERLSGELITGRRQLL 494 QG A + + + V ++ ++ +I A ++ + ++ + G+ I + Sbjct: 443 GIQGDAGVGKTFMLKAVKEFQKLHKKDNLIGLAPTNKAADEISKESGIKGQTIDS---FI 499 Query: 495 EGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQ-VLITDSGQRTGTGS-------- 545 +IVD+ + ++ L D A + N + VL+ D+ Q T G+ Sbjct: 500 HQRQHKQNQIIIVDEASMVDSRKMQKLTDIAQQTNSKLVLMGDTKQFTSIGAGAIFEQLQ 559 Query: 546 -------ALMA----MKDAGVNTYRWQGGEQRPATIISEPDRNVRYARL-AGDFAASVKA 593 A+MA K A + EQ+ ++ + ++ + A D+++ VK Sbjct: 560 AKGAIEVAVMAESMRAKTADMKELYKLTKEQKTDAVLDILESKNQFQTIEAEDYSSVVKE 619 Query: 594 ----GEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDM 649 + ++ V + + L + IR ELK + ++ + LDS S + Sbjct: 620 YLQDKDNTLLLVMKNQTRQELNELIRDELKKDNSISSHQI-LHIQEKQQLDSISVHHYTS 678 Query: 650 YRPGMVMEQ---WNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFR 706 Y G +++Q + +S VI V + +S+TL+DA+G ++ V + +L++ Sbjct: 679 YEVGDMVQQAGSYKGSLKSGTEAVIASVNEELNSITLQDAKGNSKEVNLGEHGDKLNLYK 738 Query: 707 PEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSE--DAMTVVVPGRAEPATLPVSDSP 764 + + +++ T K L ++ GD + +V E D V G+ E + ++ Sbjct: 739 TTQKEFSQNDKIIFTKKDKSLGLNNGD---IGTVKEIKDGFLTVDTGKKE---IKINTKE 792 Query: 765 FTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDET--- 821 + + + ++F ++++ NA L R+ + +Y+ E Sbjct: 793 YNYIDHAYAITNHKAQGQTSERSIFVGDSRLSSQNAFYVALTRAKAHISIYTQDKEQFRD 852 Query: 822 RTAEKLARHPSFTVVSEQI-KTRAGE 846 AE+ + + +E+I K RA E Sbjct: 853 AVAERQVKRSTLDYNTEEILKRRANE 878 >UniRef50_B3DCU7 Relaxase n=2 Tax=Burkholderia multivorans ATCC 17616 RepID=B3DCU7_BURM1 Length = 1156 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 135/427 (31%), Positives = 207/427 (48%), Gaps = 72/427 (16%) Query: 1 MMSIAQVRSAGSAGNYYTDK----------DNYYVLGSMGERWAGRGAEQLGLQG-SVDK 49 M+S +RS A Y+ DK DNYYV W GRGA+ LG++G +V K Sbjct: 1 MISKEPIRSVADAARYH-DKSFNKDAGKKADNYYVNEKATAHWQGRGADFLGIRGKAVTK 59 Query: 50 DVFTRLLEGRLPDGADLSRMQDGSN-----RHRPGYDLTFSAPKSVSMMAMLGGDKRLID 104 + F + L GR+P D ++Q+ +N + R G D T + PKSVS+ A++G D R+I Sbjct: 60 EEFIQFLSGRMPH-PDTGKIQNLANNSKGDKRRAGIDFTIAPPKSVSIAALVGKDDRVIA 118 Query: 105 AHNQAVDFAVRQVEALASTRVMTD--GQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVV 162 AH A + E AS + D G++ + GNL+ A H+T+R+ EPQLH H V+ Sbjct: 119 AHLAANARTMEWFEKHASLIRVKDEKGRNRPEVAGNLLYATVLHETNRENEPQLHNHNVI 178 Query: 163 ANVTQHNG---EWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVG 219 + ++G W++L++D +Y + +Y+ +L + LGY+ V Sbjct: 179 VSAV-YDGARHSWRSLTNDL---------LYTLRARGDIIYKAELAAALRHLGYQL-VYA 227 Query: 220 KHGM-WEMPGVP---VEAFSGRSQTIREAVGE------DASLKSRDVAALDTRKSKQHVD 269 ++G+ +E+ G V+ FS R+ +REA+ + +AS +R VA LD+R +KQ Sbjct: 228 ENGIDFELKGFSRDHVDTFSTRAVQVREALLKHGIDPGEASFDARRVAKLDSRAAKQEHP 287 Query: 270 PEIKMAEWMQTLKETGFDI-----RAYRDAAD----QRADLRTLTPGPA-SQD-GP---- 314 EI + W +T KE D+ RA AD +R RT+ G A QD GP Sbjct: 288 REILQSVWEETAKEANLDVASIVERAREAFADRQVPRRGVERTVEHGAAMGQDSGPSRGA 347 Query: 315 ----------DVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEA 364 + +AV+ AI L+ER+ FT D+ V L G I ID+ Sbjct: 348 AVSVSNDARANALRAVSWAIEHLTEREQAFTLVDL---EVTALKFSRGSISEIEWAIDQH 404 Query: 365 ISREQLI 371 + L+ Sbjct: 405 VRNHMLV 411 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 99/415 (23%), Positives = 169/415 (40%), Gaps = 77/415 (18%) Query: 1061 DFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSA 1120 D TL ++DESS+ G D + G R V GD Q ++A G+ F Q + Sbjct: 724 DGKKTLIVMDESSLTGVDDTEKLLRFAREIGARTVLQGDVKQHGSVAAGRAFEQAQI-AG 782 Query: 1121 ADVAIMKEIVR---QTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVT 1177 +V+I++E R T + R+A+ + + +A++ L++++ ++ + Sbjct: 783 MNVSILEETRRFRDATAQTRQALADMKAGNYAQAIARLDTLRVAE--------------S 828 Query: 1178 EFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDR 1237 + + + + E Q+ KG P V +V N DR Sbjct: 829 DLAKTVAERYLENLQELTAKGVDAPKVG-----------------------VVAITNSDR 865 Query: 1238 RVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHR-DALVLVDNVYHR 1296 +++N+ +H G + P L+ + E R S +R DAL+ + +R Sbjct: 866 KLINAAVHQALTDVGIISGPHFEKPHLDDPKMTGAEQRYASMLSRNRVDALIYRKS--YR 923 Query: 1297 IAGISKDDGL-----------ITLQDAEGNTRLISPRE------AVAEGVTLYTPDTIRV 1339 G+ K D L I +A+G + I+P+ A+ E D RV Sbjct: 924 EIGVEKGDVLTVTGYDVQKNRIYALNAKGKSVEINPQRQDYFSPAIQESRVFAVGD--RV 981 Query: 1340 GTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDL--- 1396 T +R + R + N V V+ DS+ G + R R G+E ++ DL Sbjct: 982 ETRAIIRLPGQELNR--LDNGTQGVI-VAIDSL----GAKIRWYRDGKESDLKNDDLRFV 1034 Query: 1397 --AYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDN 1449 AYA T++ QGA+ I G R + E+AYVA SR K + ++ T + Sbjct: 1035 DHAYAHTSYKEQGATNHREIVAVSKIGAR--VFNREAAYVAASRAKDNTEIITSD 1087 >UniRef50_B6AM13 Putative uncharacterized protein n=1 Tax=Leptospirillum sp. Group II '5-way CG' RepID=B6AM13_9BACT Length = 1140 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 160/593 (26%), Positives = 274/593 (46%), Gaps = 92/593 (15%) Query: 921 DVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGE-----LMEK----LTS 971 D+AK L+ S + E EK IL G+ +V P++ + E + EK L + Sbjct: 392 DLAKSK-QNLVTSHEALEREKRILSFEKAGRGSVEPVLNPLQAENALEAIQEKEGLILNA 450 Query: 972 GQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVM------SAVNMLPESERPRVVGLGP 1025 Q+AA RMIL T +R++ + GYAGVGKTT + + +A ++L + +V+GLGP Sbjct: 451 EQKAAARMILTTDNRYSGINGYAGVGKTTMLKPAIESLQNGAAFSVLTNA-GYKVIGLGP 509 Query: 1026 THRAVGEMRSAG-VDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAY 1084 H AV ++ AG +++QTL S+L D Q +G+T + T+ ++DE+ + DM A Sbjct: 510 QHSAVHALKDAGIIESQTLQSWLADRQ----AGKTLN-GKTVVVIDEAGLTNAKDMESAM 564 Query: 1085 ALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLI 1144 I G RAV GD Q +++A G F + Q ++ + + E+ RQ + E V Sbjct: 565 KRIEKAGARAVLVGDIKQYESVAAGPAFAMLQ-KAGMETVYVTEMQRQN-KAAENVKEAA 622 Query: 1145 NRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDV 1204 VE LE ++ + E +++E Sbjct: 623 RLSVESPEKALEKME----------------IREIRNAEER------------------- 647 Query: 1205 PMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVL 1264 Y A+ +Y ++ + RE TL +T +E R+ +N +VRE G GK Sbjct: 648 ----YRAMADEYL-KSKDPRE-TLCLTGTHEARKAVNE---NVRESLGLSGKGHGFTR-Y 697 Query: 1265 NTANIRDGELRRLSTWETHRD--------ALVLVDNVYHRIAGISKDDGLITLQDAEGNT 1316 + + + +R+ ++E +D +L + ++ + K++G + L+ +G Sbjct: 698 EAGDFTEAQKKRIDSYEEGQDIRFGKDYRSLGVKSGEIGKVEDVDKENGTVRLRMEDGRD 757 Query: 1317 RLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSV-WTVTAVSGDSVTLS 1375 ++PRE +G + + I G+R+R T ++ ++ + N + V + DS+ + Sbjct: 758 VTMTPREMSGKGHEIGKVEEIEFSKGERIRITGNEHKKEGITNGMRGEVIESNPDSLRIR 817 Query: 1376 -DGQQTREIRPGQEQAEQHIDLAYAITAHGAQG-ASETFAIAL--EGTEGNRKLMAGFES 1431 D + E++PG E ID YA T H AQG +ET + L + NR+ S Sbjct: 818 LDNGKDFEMKPGSRPVE--IDHGYAQTGHSAQGLGAETVVLDLPSDSQTLNRR------S 869 Query: 1432 AYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDV-FEPKPDREVMNAER 1483 Y L+R K V+ +TD+R+ A++ K A DV E + +R + ER Sbjct: 870 FYTNLTRTKGEVKAFTDDRERLAGAVSREKDKTMALDVEKESREERRAVEKER 922 Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 80/343 (23%), Positives = 146/343 (42%), Gaps = 55/343 (16%) Query: 2 MSIAQVRSAGSAGNYYTDKDNYYVLGSMGER----WAGRGAEQLGLQGSVDKDVFTRLLE 57 M++ + S G YY KD+YY+ G+ W G+ A +LGL G + + L Sbjct: 1 MALGKNISPGQGETYYR-KDDYYLEREGGDEHKLEWGGKLAPELGLSGKAGAEDWKNALN 59 Query: 58 GRLPD-----GADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLID----AHNQ 108 G PD G + G R G D APK++SM+ ++ + D + Sbjct: 60 GHFPDRIEIKGGSFKDPETGELLKRAGTDFVIEAPKTISMLYAATDNQEIKDWIMETQTE 119 Query: 109 AVDFAVRQVEALASTRVMTDGQS-ETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ 167 +E+ +R DG++ ET TG + H +R+ E +H H V N+T+ Sbjct: 120 VAKLTFDYLESQIGSRQGKDGKNWET--TGKALYGHTRHLLNREGECHIHDHGVFLNLTK 177 Query: 168 HN-GEWKTLSSDKVGKTGFIENVYANQIAFGRLYRE----KLKEQVEALGYETEVVGKHG 222 ++ G++K +++D++ + + R +E ++ G+E V GK+G Sbjct: 178 NSGGKYKAMTNDRM-------------MQYQRPAKEMGDAHWAKRARERGFEI-VRGKYG 223 Query: 223 MWEMPGVP---VEAFSGRSQTIREAVGEDASLK--------------SRDVAALDTRKSK 265 ++ G +EA S RS+ I + + + L+ D A TRK+K Sbjct: 224 EVQLAGFTREQIEAASSRSRDIEQYIKDKWGLEWSKLPREERNEKRSMHDEAWERTRKAK 283 Query: 266 QHVDPEIKMAEWMQTLKETGFD--IRAYRDAADQRADLRTLTP 306 + + + W + K G+D +R+ + ++ + L+P Sbjct: 284 KVHELDRLEDRWKEEAKVIGYDEAVRSLEEQFEKGIKPKYLSP 326 >UniRef50_C5SIG5 Conjugative relaxase domain protein n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SIG5_9CAUL Length = 1047 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 110/355 (30%), Positives = 167/355 (47%), Gaps = 59/355 (16%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGE---RWAGRGAEQLGLQGSVDKDVFTRLLE 57 M+ I +++SA +G+YY KD+YYV G RW G GA QLGL G + F +LL+ Sbjct: 1 MLKITRLKSASRSGDYY-GKDDYYVTGEANTPNLRWGGEGAAQLGLVGEANSLDFKKLLK 59 Query: 58 GRLPD--GADLS------RMQDGSN----------RHRPGYDLTFSAPKSVSMMAMLGGD 99 G PD G+ LS R Q G++ +H PG+D+TFSA KS S+MA++ GD Sbjct: 60 GINPDPDGSALSKADEALREQAGASGETDPERTIPKHAPGWDMTFSATKSASIMALVAGD 119 Query: 100 KRLIDAHNQAVDFAVRQVEA-LASTRVMTDGQS-ETVLTGNLVMALFNHDTSRDQEPQLH 157 R+ A N++V + E A TR TDG + + +LTGNL A +H SR +P++H Sbjct: 120 DRIQAAFNRSVQSTMDYAEKHFAITRQRTDGGAPKQILTGNLTYATTSHSMSRAGDPEMH 179 Query: 158 THAVVANVTQ-HNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETE 216 H V+AN T+ +G W+ L + +Y +Q G + + + +++ LGY Sbjct: 180 NHVVLANATRMEDGTWRALET---------APLYKHQQFLGNVQKAEFAHELKKLGYNLV 230 Query: 217 VVGKHGMWEM------------------PGVPVEAFSGRSQTIREAV-------GEDASL 251 G WE+ + ++ FS R I + G + S Sbjct: 231 QGKTQGTWEIAEFSAAYRGENDKAGIGPADLLIDTFSKRHVEIMGKIAAAEADKGRELSK 290 Query: 252 KSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTP 306 R L R K D +++ A W + ++ G D+ AA R + LTP Sbjct: 291 GERQTLILKDRPQKLLTDRDVQQALWKEVARDAGVDLDQIVSAAKTREVGQDLTP 345 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 140/518 (27%), Positives = 216/518 (41%), Gaps = 100/518 (19%) Query: 973 QRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGE 1032 Q A + +L R++V+ G AG GKTT F V ++ L + +V L PTH+A GE Sbjct: 487 QAAVVQHVLTDGARYSVIHGSAGTGKTTTFDLVRQTLDRLSAGQ-IEIVALAPTHKAKGE 545 Query: 1033 MRS-AGVDAQTLASFLHDTQLQQRSGET--------PDFSNTLFLLDESSMVGNTDMARA 1083 + AG+ +T+ FL LQQ+ G T + L+DE SM+ N M R Sbjct: 546 LADRAGIATETVQMFL----LQQQKGSTQTAPSSQMANLKGKWLLVDEGSMLSNVQMDRI 601 Query: 1084 YALIA-AGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQT--PELREAV 1140 + +G + + S D QL A+ G P RL A+ V +K+ VRQ P LR + Sbjct: 602 IDVAERSGVDKVIFSFDERQLAAMEAGAPTRLAMHAGASTV-YLKDNVRQAQMPVLRAGI 660 Query: 1141 YSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKG-E 1199 + + + L S++P VTE + + LA A A+ K E Sbjct: 661 MKMAD---GKPWEALPSIRP--------------YVTETRSNDDQILARA---AVAKWRE 700 Query: 1200 AFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQV 1259 PD T +V N+ R + N+MI + G +G+E V Sbjct: 701 MGPD-----------------------TKVVVGTNKMRGLANAMIRTELQGMGLVGREDV 737 Query: 1260 MVPVLNTANIRDGELRRLSTWET------HR--DALVLVDNVYHRIAGISKDDGLITLQD 1311 + N +L ++ + H+ +A + + H + GI +TLQ Sbjct: 738 AHKTYVSENRSPEQLGMITAYALGQRIIFHKADEANRIGRHTVHSVVGIDMRTNRLTLQS 797 Query: 1312 AEGNTR------LISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVT 1365 E R L S R+ GV Y TI++ GD++ + +D++ G N +TV Sbjct: 798 TEYGKRSYNLAGLTSGRDEPTFGV--YREQTIKLSVGDQLAWNITDKKAGVTNNDAFTVA 855 Query: 1366 AVSGDSVTLSDGQQTREIRPGQEQAEQHIDL-----------AYAITAHGAQGASETFAI 1414 A+ G + Q+ EI + Q DL Y++TA+ AQGAS + Sbjct: 856 AIKGSKLAT---QREVEIDGVRTLKTQVFDLENDPVARFMSHGYSLTANRAQGASFGKVV 912 Query: 1415 ALEGTEGNRKLMAGFES---AYVALSRMKQHVQVYTDN 1449 A+ G+ M F + YV SR +Q Q TD+ Sbjct: 913 AVLGS-----YMGEFANQARGYVMASRPRQEFQWVTDD 945 >UniRef50_B6ALF3 Putative mobilization protein TraA n=1 Tax=Leptospirillum sp. Group II '5-way CG' RepID=B6ALF3_9BACT Length = 899 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 134/395 (33%), Positives = 197/395 (49%), Gaps = 47/395 (11%) Query: 1 MMSIAQVRSAGSAGNYYT--------DKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVF 52 M+SI + SA YY + ++YY G RW GRGA+ LGL G V K+ F Sbjct: 1 MLSIVTRGNGTSAQAYYEHLIEGRDREIEDYYAKREKG-RWLGRGADALGLSGPVRKEAF 59 Query: 53 TRLLEGRLPD-GADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGD---KRLIDAHNQ 108 L G P G L +Q+ N HR G+DLTFSAPKSVS++ LG D KR+ AH++ Sbjct: 60 RDLAFGFDPQTGKPL--VQNPGNNHRFGWDLTFSAPKSVSLVWALGDDETQKRIAAAHDR 117 Query: 109 AVDFAVRQVEALAS-TRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ 167 AV+ A+ +E AS +R GQ E + +LV+A + H TSR+Q+PQLH+H V NV Sbjct: 118 AVEAALSYMERHASFSRKGHGGQEE--IRADLVVATYRHYTSREQDPQLHSHGFVFNVAM 175 Query: 168 -HNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGK-HGMWE 225 +G+ +TL + + ++A G YR L ++++ GY GK + E Sbjct: 176 GEDGKTRTLEGS---------HFFEWKMAGGAAYRVALAKELQEQGYTVLRDGKSFRLGE 226 Query: 226 MPGVPVEAFSGRSQTIREAVGEDA--SLKSRDVAALDTRKSKQHVDPEIKMAEWMQ---T 280 + + FS R + I ++ E K+ +VA L TRKSKQ DPE EW + Sbjct: 227 IDRELEDLFSTRRRQIEASLSERGVRGAKASEVATLTTRKSKQERDPEELRIEWRERAGR 286 Query: 281 LKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVL 340 E+G R A Q DL + G D ++++ L++ + FT T Sbjct: 287 FLESGI-FREREHALGQ--DLSRIIG-----HGLDSKKSLELLPESLTQERSTFTETQAH 338 Query: 341 ARTVGIL--PPENGVIERARAGIDEAISREQLIPL 373 AR + L + V ER+ +D +SR +++PL Sbjct: 339 ARILQELQGAEDLSVAERS---VDAILSRPEVVPL 370 Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 62/193 (32%), Positives = 94/193 (48%), Gaps = 20/193 (10%) Query: 969 LTSGQRAATRMIL-ETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTH 1027 L + Q+ R I ETS VQG+AG GK+T +A + + E RV G + Sbjct: 420 LPTEQKTMVRSITHETS--LVAVQGWAGTGKSTALKAALE----IWEKNGFRVRGAALSG 473 Query: 1028 RA-VGEMRSAGVDAQTLASFLHDTQLQQRSGE---TPDFSNTLFLLDESSMVGNTDMARA 1083 +A +G +G+ ++TLA+ L++ GE P S+ + ++DE+ MVG+ M R Sbjct: 474 KAALGLSEGSGIVSKTLAA------LEREIGEDGILPLTSHDILVVDEAGMVGSRTMERI 527 Query: 1084 YALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQT-PELREAVYS 1142 + + G + V GD QL AI G FR R + + + I RQT E R+A+ Sbjct: 528 LSKVHESGAKLVLVGDVRQLPAIEAGAAFRAILERVGS--SELSHIRRQTLEEDRQAIRD 585 Query: 1143 LINRDVERALSGL 1155 L E+AL L Sbjct: 586 LALGKAEKALENL 598 >UniRef50_C7HYW1 Conjugative relaxase domain protein n=1 Tax=Thiomonas intermedia K12 RepID=C7HYW1_THIIN Length = 945 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 123/390 (31%), Positives = 183/390 (46%), Gaps = 51/390 (13%) Query: 1 MMSIAQVRSAGSAGNYYTDKDN---YYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLE 57 M+S +++ + G A YYTD+ + YY + W G+ AEQLGL G VD T +L+ Sbjct: 1 MISKSEITNPGGAAGYYTDQQSAAEYYSGEQVPSAWHGKAAEQLGLTGPVDAAALTGILQ 60 Query: 58 GRL----PDGADLSRMQDGSNR-----------HRPGYDLTFSAPKSVSMMAMLGGDKRL 102 GR+ P+ + Q G R HR G+D T SAPKSVS+ A++ GD R Sbjct: 61 GRVIESDPETGEARERQLGRTRIDPDTGERSTEHRAGWDFTISAPKSVSVQALVHGDDRA 120 Query: 103 IDAHNQAVDFAVRQVEAL-ASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAV 161 + AH A A+ +E A TR+ + ++T L +A F H +SR +PQLHTHA+ Sbjct: 121 LQAHRAATTAALDYLERHGAQTRISSGNFAKT---DGLAVATFEHVSSRAGDPQLHTHAL 177 Query: 162 VANVTQHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKH 221 +ANVT +G +LS++K ++ ++ A +Y L +++ G+ + K Sbjct: 178 IANVTTRDGRACSLSNEK---------LFQHRAAADAVYHNTLSRELQRAGFAVQHDSK- 227 Query: 222 GMWEMPGVPVEA---FSGRSQTIREAVGE------DASLKSRDVAALDTRKSKQHVDPEI 272 G E+ +A FS RS I A+ E D++ SR AALDTR K+ + Sbjct: 228 GHVEIASYSKDALRDFSTRSAEIEAALAERGQTRADSTALSRQAAALDTRHDKELPETRA 287 Query: 273 KMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKV 332 A+ Q E ++ + A R P + AV +AIA LSER+ Sbjct: 288 AHADRWQAQAE-ALSVKPAERSTATAAAARMTRSDP--------EAAVDKAIAHLSEREA 338 Query: 333 QFTYTDVLARTVGILPPENGVIERARAGID 362 F D L R + IE+ ID Sbjct: 339 VFGKHD-LHREAARFSAGSATIEQIEKEID 367 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 180/664 (27%), Positives = 269/664 (40%), Gaps = 82/664 (12%) Query: 867 AIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGY 926 A+ A+ + ++ F DL EA F+A ++ EI+ + + GDL+ G+ Sbjct: 325 AVDKAIAHLSEREAVFGKHDLHREAARFSAGSATIEQIEKEIDRRERSGDLVQ---QPGH 381 Query: 927 GTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGEL------MEK-----LTSGQRA 975 L SR + EAE+ + + G+ +M P E EK L+ QRA Sbjct: 382 KADLYTSRDALEAERDTAKRLDAGRGEHEQIM--TPREFDTALRQFEKQKGFSLSDEQRA 439 Query: 976 ATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM-R 1034 A+R IL DRF VQG AG GKTT + V A E++ V G M R Sbjct: 440 ASRQILTGDDRFQGVQGLAGTGKTTMLQFVREAA----EAKGWTVAGHSNGSEQAATMER 495 Query: 1035 SAGVDAQTLASFLHDTQLQQRSGETPDF----SNTLFLLDESSMVGNTDMARAYALIAAG 1090 +G+ + T AS L D Q R + PD + L ++DE+SM G + Sbjct: 496 ESGIKSTTTASHLIDQQKTLR--DAPDRPAAPARELRIMDEASMSGQRNFRDVIKTTEQS 553 Query: 1091 GGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPE-LREAVYSLINRDVE 1149 G R V GD Q Q++ G+ F Q I RQT E ++ AV ++ R Sbjct: 554 GARTVFLGDKLQHQSVEAGRAFERAQKHMPTATLGEASIRRQTTEHMKAAVSDVLARRHG 613 Query: 1150 RALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLY 1209 AL +++V +V + AP T H A+ A L Sbjct: 614 DALRKIQTV---EVRPERDKLAP--GATREQHRDAARADNAH----------------LV 652 Query: 1210 EAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANI 1269 + I +DYT + R +TL++T N DR+ LN+ I + +G L + V L +A++ Sbjct: 653 QRIAKDYTALPADQRAKTLVITATNADRKALNNAIRAELKASGALADGKT-VNALRSADM 711 Query: 1270 RDGELRRLSTW------ETHRDA--LVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISP 1321 E +R + + +DA + +T +D +G + P Sbjct: 712 TKVEAKRAENYAPGQVVQLQQDAKRAPYAKGAQLEVVATDSRTNTLTCRDVQGREVRLDP 771 Query: 1322 REAVAEGVTLYTPDTIRVGTGDRMRFTKS------DRERGYVAN-SVWTVTAVSGDSVTL 1374 E +T YT +T GDR+RFT++ D E V N V GD +TL Sbjct: 772 ---AREKLTAYTRETREFAQGDRIRFTENHKLPTRDGEGLAVRNGQSAIVEKTRGDQITL 828 Query: 1375 SDGQ----QTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFE 1430 G+ Q EI +H Y T+H AQG + TEG R G Sbjct: 829 RIGEGKTAQRIEIDAKANLKAEH---NYVTTSHSAQGLTYDKVFIHHNTEGGRH---GDR 882 Query: 1431 SAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDV---FEPKPDREVMNAERLFST 1487 YV ++R ++ +YT + +QK A D+ P PDR+ ER + Sbjct: 883 ETYVNITRAREEATLYTQDVGKAEKQAGAELQKTAALDLQPERSPAPDRQP-EPERERTL 941 Query: 1488 AREL 1491 REL Sbjct: 942 EREL 945 >UniRef50_A3EUE2 Probable TrwC protein n=2 Tax=Leptospirillum sp. Group II RepID=A3EUE2_9BACT Length = 1128 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 161/607 (26%), Positives = 277/607 (45%), Gaps = 95/607 (15%) Query: 921 DVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGE-----LMEK----LTS 971 D G L+ SR + E EK IL+ G+ A+ P+M E + E+ L + Sbjct: 384 DALAGSKQNLVTSREALEREKRILKFEKAGRGAIDPVMNIFQAEATLRAIQEREGLTLNA 443 Query: 972 GQRAATRMILETSDRFTVVQGYAGVGKTTQFR-AVMSAVNMLPESERPR----VVGLGPT 1026 Q+AA MIL T +R+ + GYAG GKTT + A+ S N S V+GLGP Sbjct: 444 EQKAAAMMILTTGNRYVGINGYAGTGKTTMLKPAIESLQNGAAFSALKNAGYEVIGLGPQ 503 Query: 1027 HRAVGEMRSAG-VDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYA 1085 H AV +R AG ++++TL S+L D Q + E T+ ++DE+ + D+ A Sbjct: 504 HSAVHALRDAGIIESRTLQSWLADRQAGKALTE-----KTVVVIDEAGLTNAKDLESAMK 558 Query: 1086 LIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLIN 1145 I G RAV GD Q +++A G F + Q Sbjct: 559 RIEKAGARAVLVGDIKQYESVAAGPAFAMLQK---------------------------- 590 Query: 1146 RDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLA-EAQQKAMLKGEAFPDV 1204 +G+E+V +++ RQ APE+ + A+L+ E+ +KA+ K + ++ Sbjct: 591 -------AGMETVYVTEMQRQRN--APENV------REAARLSIESPEKALEK-LSIREI 634 Query: 1205 --PMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVP 1262 P ++A+ +Y +++TL++T +E R+ +N I + G+ G+E Sbjct: 635 RNPQERFKALSEEYLKSLD--KKETLVLTGTHEARKAVNENIREALNLKGK-GEE---FS 688 Query: 1263 VLNTANIRDGELRRLSTWETHRDALVLVD--------NVYHRIAGISKDDGLITLQDAEG 1314 + + +R+ ++E +D D ++A + ++ G + L+ +G Sbjct: 689 RFEAGDFTEARKKRIDSYEVGQDVRFGKDYRSMGVQAGEVGKVADVDREKGTVLLEMEDG 748 Query: 1315 NTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSV-WTVTAVSGDS-- 1371 + +++PRE +G + +T+ + GDR+R T ++ ++ + N + V D+ Sbjct: 749 RSVVLTPRELSGKGHEIGQLETVELTKGDRIRITGNELKQEGITNGMRGEVIESKHDTLL 808 Query: 1372 VTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQG-ASETFAIALEGTEGNRKLMAGFE 1430 V L +G++ +++PG E ID YA T H AQG +ET + L +R L Sbjct: 809 VRLDNGKEF-DLKPGSRPVE--IDHGYAQTGHSAQGLGAETVILDLPSD--SRTLNE--R 861 Query: 1431 SAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARE 1490 S Y L+R K V +TD+++ + A+ K A DV K RE +R S+ E Sbjct: 862 SFYTNLTRTKGEVVAFTDDQERLSGAVTRKNDKTMALDV--EKQSRE-KTRQREQSSGLE 918 Query: 1491 LRDVAAG 1497 ++ AG Sbjct: 919 KENIVAG 925 Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 24/197 (12%) Query: 2 MSIAQVRSAGSAGNYYTDKDNYYVLGSMGE----RWAGRGAEQLGLQGSVDKDVFTRLLE 57 M++ + S G YY KD+YY+ GE W G+ A ++GL G VD + + L Sbjct: 1 MALGKNISPGQGKTYYR-KDDYYLEREGGEDHKLEWGGKLASEMGLSGKVDAEDWKNALN 59 Query: 58 GRLPDGADLSRMQDGSNR--------HRPGYDLTFSAPKSVSMMAMLGGDKRLID----A 105 G PDG +R++ GS + R G D +PK+VSM+ ++ L D Sbjct: 60 GHFPDG---TRIKGGSFKDPDTGELLKRAGTDFVIESPKTVSMLYAATDNQDLKDWIVKT 116 Query: 106 HNQAVDFAVRQVEALASTRVMTDGQS-ETVLTGNLVMALFNHDTSRDQEPQLHTHAVVAN 164 + + +E+ R DG++ ET TG + H T+R+ E +H H V N Sbjct: 117 QAEVEKLSFDYLESQIGARRGKDGKTWET--TGQALYGHVRHFTNREGECFIHAHGVFLN 174 Query: 165 VTQH-NGEWKTLSSDKV 180 VT++ +G+++ +++D++ Sbjct: 175 VTRNSDGKYQAMTNDRM 191 >UniRef50_C1F5K2 Conjugative relaxase domain protein n=4 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F5K2_ACIC5 Length = 926 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 251/936 (26%), Positives = 399/936 (42%), Gaps = 131/936 (13%) Query: 1 MMSIAQVRSAGSAGNYYTDK-----DNYYVLG-SMGERWAGRGAEQLGLQGSVDKDVFTR 54 M++I++ SA A Y+ + NY+ G ++ W G+ A++ GL G+V F R Sbjct: 1 MLNISKPLSASQAQTYHAKEFTAAEQNYWKQGDTIQGEWHGKLADEFGLSGTVGAAEFAR 60 Query: 55 LLEGRLPD-GADL--------SRMQDGSN----RHRPGYDLTFSAPKSVSMMAMLGGDKR 101 L EG+ P+ G L + +G HR G+D TFSAPKS+S+ A++GGD R Sbjct: 61 LSEGQHPETGKQLVSHRVVHEYKNSEGKTVSPVEHRAGWDATFSAPKSISLTALVGGDDR 120 Query: 102 LIDAHNQAVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQE----PQLH 157 + +AH +AV+ A+ ++E R+ + +ET TG A F HDT+R + PQLH Sbjct: 121 VREAHREAVNVALNELEKYTQARIGGNNPAET--TGKFAAAKFEHDTARPVDGYAAPQLH 178 Query: 158 THAVVANVTQH-NGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETE 216 TH VV N+T+ NG + L +++ +Q +Y+ L ++ LGYE E Sbjct: 179 THVVVFNMTERDNGAMRALQP---------HSLFESQQFATAVYQSHLTYKLRDLGYEIE 229 Query: 217 VVGKHGMWEMPGVP---VEAFSGRSQTIREAVGEDASL--KSRDVAALDTRKSKQHVDPE 271 GK G ++ G +EA S R Q I EA+G ++ +AA +TR K + P Sbjct: 230 A-GKSGAPDVKGFTAAYLEASSPRRQQIEEALGRSGFTGPEAAQIAAHNTRDKKVILSPA 288 Query: 272 IKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERK 331 +A Q E G AA QR +T P ++ V++AVT A ER+ Sbjct: 289 EILAAHKQIADEFGNQAERVVAAARQRRMEQTQERLP-NERQQQVREAVTFARDKGFERE 347 Query: 332 V----QFTYTDVLARTVG-ILPPENGVIERARAGIDEAISREQL--IPLDREKG--LFTS 382 + Y D L R +G + PE RA + I+ + I D K FT+ Sbjct: 348 AVVDERALYVDALRRGMGEMTYPE------VRASFEARIASGEFKQITDDGSKAGRRFTT 401 Query: 383 GIHVLDELSVRALSRDIMKQNRVTVHPEKSVP----RTAGYSDAVSVLAQDRPSLAIVSG 438 + E + RD + + E +VP R + V+ + S V G Sbjct: 402 ATTIKAESEIVQKVRDGQSRAPQIMGIENAVPLVDSRPHFNAAQKRVVEEVLTSYDRVQG 461 Query: 439 QGGAAG--QRERVAELVMMAREQGREVQIIAADRRSQMNMK----QDERLSGELITGRRQ 492 G AG + +A + A G V+ A R+ ++ Q + L L G Q Sbjct: 462 LQGRAGSGKTSVLATIREGAERNGYAVEGFAPTSRAAKQLRDAGIQADTLQRFLAGGGLQ 521 Query: 493 LLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGT--GSALMAM 550 + G A +VD+ S ++ L+ A + +LI D+ Q G G M Sbjct: 522 VAGGPARK--HLYMVDESSLASTQQMRDFLNKIAPQDKVLLIGDTRQHQGVDAGKPFEQM 579 Query: 551 KDAGV------------------------NTYRWQGGE--QRPATIISEPDRNVRYARLA 584 ++AG+ N G E Q I D R +A Sbjct: 580 QEAGMRMAQLDQIMRQKDPDLLKAVEHLSNNETALGVEMLQHQGRITQIEDPQQRITAIA 639 Query: 585 GDFAASVKAGEESVAQVS--GVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVW-LDS 641 D+AA ES VS +AI QA+R EL+ GV+ + +M L+P + Sbjct: 640 KDYAAH----PESTLIVSPDNASRRAI-NQAVRQELQALGVVDKTDHSMRVLAPRNDMTG 694 Query: 642 RSRYLRDMYRPGMVM------EQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRI 695 R Y+PG V+ ++ E RS+ + V A + +T+R G+ QV Sbjct: 695 ADREWAARYQPGDVLHYVRGSKEHGIEARSYAQVVT--TNAPENLVTVRKVDGQ-QVTYD 751 Query: 696 SSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEP 755 S + +R + A G+R+++T L+V+ D L +DA + + Sbjct: 752 PSRLRGVAAYREIEREFAIGDRVQLTAPNRDLQVANRD-LGTLENFDDAGRITL---LMD 807 Query: 756 ATLPVSDSPFTALKLENGWVETPGHSVS--DSATVFASV-TQMAMDNATLNG------LA 806 + VS P ++G+ T HS SA V ++ TQ+ + +NG ++ Sbjct: 808 SGKNVSFDPREMRHFDHGYAVT-SHSSQGLTSARVLVNIDTQVHPE--LINGRFAYVSVS 864 Query: 807 RSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKT 842 R+ +DV+++++ D AE L+ S T +KT Sbjct: 865 RASQDVQIFTN-DAANLAENLSHDASKTSALPLVKT 899 Score = 106 bits (264), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 138/587 (23%), Positives = 237/587 (40%), Gaps = 83/587 (14%) Query: 901 FTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGK--------- 951 + E+ A+I G+ + + + +AE I++ + +G+ Sbjct: 369 YPEVRASFEARIASGEFKQITDDGSKAGRRFTTATTIKAESEIVQKVRDGQSRAPQIMGI 428 Query: 952 EAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNM 1011 E +PL++ P + Q+ +L + DR +QG AG GKT+ V++ + Sbjct: 429 ENAVPLVDSRP-----HFNAAQKRVVEEVLTSYDRVQGLQGRAGSGKTS----VLATIRE 479 Query: 1012 LPESERPRVVGLGPTHRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDE 1071 E V G PT RA ++R AG+ A TL FL LQ G L+++DE Sbjct: 480 GAERNGYAVEGFAPTSRAAKQLRDAGIQADTLQRFLAGGGLQVAGGPA---RKHLYMVDE 536 Query: 1072 SSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVR 1131 SS+ M R + A + + GDT Q Q + G+PF Q + +A + +I+R Sbjct: 537 SSLASTQQM-RDFLNKIAPQDKVLLIGDTRQHQGVDAGKPFE-QMQEAGMRMAQLDQIMR 594 Query: 1132 QT-PELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEA 1190 Q P+L +AV L N E AL G+E ++ + ++ + Sbjct: 595 QKDPDLLKAVEHLSNN--ETAL-GVEMLQ-----------------------HQGRITQI 628 Query: 1191 QQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREK 1250 + P AI +DY E TLIV+ N RR +N + + Sbjct: 629 ED------------PQQRITAIAKDYAAHP----ESTLIVSPDNASRRAINQAVRQELQA 672 Query: 1251 AGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDN---------VYHRIAGIS 1301 G + K + VL N G R + D L V Y ++ + Sbjct: 673 LGVVDKTDHSMRVLAPRNDMTGADREWAARYQPGDVLHYVRGSKEHGIEARSYAQVVTTN 732 Query: 1302 KDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSV 1361 + L+T++ +G P + GV Y GDR++ T +R+ + Sbjct: 733 APENLVTVRKVDGQQVTYDP--SRLRGVAAYREIEREFAIGDRVQLTAPNRDLQVANRDL 790 Query: 1362 WTVTAV--SGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGT 1419 T+ +G L D + P + +H D YA+T+H +QG + + T Sbjct: 791 GTLENFDDAGRITLLMDSGKNVSFDP---REMRHFDHGYAVTSHSSQGLTSARVLVNIDT 847 Query: 1420 EGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTA 1466 + + +L+ G AYV++SR Q VQ++T++ + +++ K +A Sbjct: 848 QVHPELING-RFAYVSVSRASQDVQIFTNDAANLAENLSHDASKTSA 893 >UniRef50_Q1NH26 Putative uncharacterized protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NH26_9SPHN Length = 981 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 99/300 (33%), Positives = 145/300 (48%), Gaps = 20/300 (6%) Query: 8 RSAGSAGN---YYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRLPDGA 64 R GS GN YY D Y + W G A +L L G VD + F LL G++ G Sbjct: 6 RLKGSPGNIARYYAIGDYYTKGEAEHSSWGGSLAGELDLSGDVDPETFRSLLAGKVA-GQ 64 Query: 65 DLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEALASTR 124 L R + H PG+D SAPKSVSMMA+ GD+R++ H +AVD + +E A R Sbjct: 65 QLGRHRAEGIEHHPGWDFAISAPKSVSMMALAMGDERIVQLHERAVDVTLAYLEEHAQRR 124 Query: 125 VMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVT--QHNGEWKTLSSDKVGK 182 +G+ TG L+ A F SR+ +P LHTH VV N+T Q +L + Sbjct: 125 KRDEGKIVHETTGRLLWARFTEHASRELDPHLHTHVVVLNMTSGQEGDPMASLET----- 179 Query: 183 TGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP---VEAFSGRSQ 239 +YA Q+ G++YR +L + LGYE + + G++E+ GVP +E S R+Q Sbjct: 180 ----RAMYAVQMTSGQIYRNELAHGLRELGYEIDFDPRRGLFEIRGVPKALIEEMSQRAQ 235 Query: 240 TIREAVGED--ASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQ 297 I E + + +R + TR +K + + + +W L + A R A+Q Sbjct: 236 QINEHAQQHGLSGQAARRQSFYATRGAKVKIGIDELLIQWRGRLGPHEKPLEAVRGGAEQ 295 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 107/483 (22%), Positives = 198/483 (40%), Gaps = 77/483 (15%) Query: 983 TSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVDAQT 1042 + DR T + G AG GK+T R++ A LP + + +GE A ++++T Sbjct: 432 SRDRVTGLHGVAGAGKSTLVRSLKDAA--LPGTTLIALAPTSAAAAELGE--KAQIESRT 487 Query: 1043 LASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQ 1102 +AS L G N + +LDE+ +GN R + A G R + GD Q Sbjct: 488 VASLLA-------GGGYGISGNHVLVLDEAGQLGNRQALRVLEISRATGARVILLGDNKQ 540 Query: 1103 LQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQ 1162 AI G+ F L Q + + +QT ++EAV + ++ L+ V Sbjct: 541 TGAIEQGKAFWLMQKLGMQTAELTESRRQQTEAMQEAVAHARAENYAASIGRLDKV---- 596 Query: 1163 VPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPE 1222 + GE TL + +V ++T +P Sbjct: 597 ---------------------------------VSGED----AATLAKGVVAEWTRLSPR 619 Query: 1223 AREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLS---- 1278 +R T I+ N R ++NS I +V ++ G + E+ + VL T G+ +RL+ Sbjct: 620 SRAATNILVLDNASRLIVNSKIREVLQREGVVAAEETRLSVL-TPGGHSGQEKRLARFYS 678 Query: 1279 -----TWETHRDALVLVDNVYHRIAGISKD---DGLITLQDAEGNTRLISPREAVAEGVT 1330 T+ ++ L + +R+ G+ +D + L D +G T L PR A + V Sbjct: 679 GGQVVTFSRNQTGAGLERDAEYRVVGVVRDAQGRQRVRLVDEQGRTHLWDPRMAKSSQVN 738 Query: 1331 LYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTL--SDGQQTREIRPGQE 1388 ++ + + GDR+++ + RE TV + G T+ G++ + + + Sbjct: 739 VFVDEQRDLSEGDRIQWRLASRELKLKNAERGTVEKIEGSLATIRWDRGKRVQTVDLSKH 798 Query: 1389 QAEQHIDLAYAITAHGAQGAS--ETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVY 1446 + H Y+ T + AQ + + +A G+ + ++ Y A++R + V+++ Sbjct: 799 KTWDH---GYSETVYSAQSKTYDRVYVLAPVGSP-----LVNGQNFYTAITRARYGVKLW 850 Query: 1447 TDN 1449 T + Sbjct: 851 TQD 853 >UniRef50_B1ZY28 Conjugative relaxase domain protein n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZY28_OPITP Length = 910 Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 212/828 (25%), Positives = 351/828 (42%), Gaps = 122/828 (14%) Query: 12 SAGNYYTDK---DNYYVLG-SMGERWAGRGAEQLGLQGSVDKDVFTRLLEG-------RL 60 +A Y+ D +YY G ++ W G AE+LGL G+V + F L EG RL Sbjct: 12 NAREYFRDHLRVGDYYSEGQTIAGDWLGLAAERLGLTGAVTEKEFLALCEGLHPETGKRL 71 Query: 61 PDGADLSRMQDG---SNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQV 117 + +R DG +NR R +D T S PKSVS++A D R++DAH AV A+ ++ Sbjct: 72 TARMNTARRVDGKLAANR-RIFHDFTISPPKSVSIVARCQ-DSRIVDAHRDAVRLAMIEL 129 Query: 118 EALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGE--WKTL 175 E A TR+ Q+ +TGN+V A F HDTSR +P LHTH VV N T E WK L Sbjct: 130 EKFAETRIRKSKQNAERVTGNIVAACFQHDTSRALDPHLHTHCVVFNATFDPVENRWKAL 189 Query: 176 SSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP---VE 232 + VG +Y Q LY +L +++ +LGY E ++ +E+ VP +E Sbjct: 190 QT--VG-------MYRAQKFAENLYFHELSKRLRSLGYGIENNARN--FEISRVPAALIE 238 Query: 233 AFSGR-SQTIREAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAY 291 FS R +Q EA A+ D+ AL R + +H D +IK A + L+E ++ + Sbjct: 239 RFSKRHAQIAAEAERYVANGYDGDIGALRRRLAHEHRDRKIKGAT-AELLREH-WNRQLS 296 Query: 292 RDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPEN 351 D A LR + PA D++ V A L + +++A + EN Sbjct: 297 PDEARALTGLRGV---PAITQRADLRSIVGWADEHLFTHRAVVNDYELIATALARGRGEN 353 Query: 352 GVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRV---TVH 408 ++ R+ A+ + + D + L ++ + + EL + ++D K++R H Sbjct: 354 FDLDALRS----AVEQHGYLREDGTRKLISAEL-LRCELDIVLAAQDGRKRHRALNPNYH 408 Query: 409 PEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAA 468 P S+ ++ A + R + + G G G+ + E+ + R V ++A Sbjct: 409 PSPSL--SSEQERAARRILTSRDFITLFRG-GAGTGKSHTLKEVALGLAAAERPVVVLAP 465 Query: 469 DRRSQMNMKQD----ERLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDG 524 R+ ++ D E L+ L TGR G+ VI+D+ ++ ++ L+ Sbjct: 466 QRQQVHALETDGLPAETLARTLATGR--------LDHGAVVILDEAGQVGGRDLHALIRL 517 Query: 525 AARHNVQVLITDSGQRTGTGSALMAMKD---------AGVNTYRWQG------------- 562 H +++++ ++ G +A A++ A + T R Q Sbjct: 518 VQAHGGRLILSGDTRQHGAVAASDALRAIEQHAKPRVAVLRTIRRQNPALARTSEERRFI 577 Query: 563 ------------GEQRPAT-------IISEPDRNVRYARLAGDFAASVKAGEESVAQVSG 603 G+Q + + E VR +AG++ +++ GE V Sbjct: 578 RRYRAVVKKASEGKQAESFDLLDQLGCVRELPDEVRGVAVAGEYLTAMERGESVVVVAQT 637 Query: 604 VREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRD--MYRPGMVMEQWNP 661 E + A+R+ L + G LG P PV D RD Y PG Q Sbjct: 638 WNEVHAVNDAVRTALHSAGKLG-PGTPTVTYQPV--DRSESQKRDPRFYEPG----QAAH 690 Query: 662 ETRSHDRY----VIDRVTAQSHSLTL-RDAQGETQVVRISSLDSSWSLFRPEKMPVADGE 716 RS+ R+ + A + L +D + T R + + + + M +A G+ Sbjct: 691 FLRSYGRFKKGDTCEIAEANDRGVVLVKDGRRSTVGYRHA---ERFIVTKRTDMEIAPGD 747 Query: 717 RLRVTGK---IPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVS 761 RL++ + G R+ G+ + VA+V +V R TL S Sbjct: 748 RLQLKANGRSVEGTRLHNGELVTVANVDSSGALIVTDERGATKTLTSS 795 Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 57/168 (33%), Positives = 82/168 (48%), Gaps = 13/168 (7%) Query: 969 LTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHR 1028 L+S Q A R IL + D T+ +G AG GK+ + V L +ERP VV L P + Sbjct: 413 LSSEQERAARRILTSRDFITLFRGGAGTGKSHTLKEVALG---LAAAERP-VVVLAPQRQ 468 Query: 1029 AVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIA 1088 V + + G+ A+TLA L +L + +LDE+ VG D+ L+ Sbjct: 469 QVHALETDGLPAETLARTLATGRLDH---------GAVVILDEAGQVGGRDLHALIRLVQ 519 Query: 1089 AGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPEL 1136 A GGR + SGDT Q A+A R + + VA+++ I RQ P L Sbjct: 520 AHGGRLILSGDTRQHGAVAASDALRAIEQHAKPRVAVLRTIRRQNPAL 567 >UniRef50_A8ZNG7 Putative uncharacterized protein n=2 Tax=Acaryochloris marina MBIC11017 RepID=A8ZNG7_ACAM1 Length = 1344 Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 199/821 (24%), Positives = 323/821 (39%), Gaps = 167/821 (20%) Query: 16 YYTD-------KDNYYVLGS----MGERWAGRGAEQLGLQGSVDKDVFTRLLEGRLPDGA 64 YYT+ +D YY G +W G GA+ L L+G +++ VF +L G P Sbjct: 17 YYTEDEALKNSEDEYYAPGKDPVVSPCKWYGNGADSLNLKGVINQKVFKKLFYGHHPQTG 76 Query: 65 DLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVD--FAVRQVEALAS 122 R + + + R G DLTF K S++A++GGD+R+I+ H QA+ F + Q + Sbjct: 77 KRLRKKPTNGQERLGIDLTFGPGKEASILALVGGDRRIIELHEQALQKVFDIFQSRYTQT 136 Query: 123 TRVMTDGQSETVLTGNLVMALFNHDTSRD--------QEPQLHTHAVVANVTQHNGEWKT 174 +GQ V T +L+ A NH T+R +P LHTH VV N TQ NG+W++ Sbjct: 137 RVRHGNGQRSLVNTNSLIGAFINHATARPVTIDGKTYSDPALHTHIVVMNATQINGKWQS 196 Query: 175 LSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWE-MPGVPVEA 233 LS++ + K+ ++ G +YR + + + LGY V G E + V Sbjct: 197 LSNEAIFKS----------LSLGSIYRHFIDKGLAELGY---TVRPDGTIEGLSPETVWH 243 Query: 234 FSGRSQTIR---EAVGEDASLKSRDVAALDTRKSKQ-HVDPEIKMAEWMQTLKETGFDIR 289 F R+Q + + G + + ++R A L TR K+ + + KM W++ L GF + Sbjct: 244 FKKRTQEVERYLKKYGLEDTQENRQNAVLRTRNKKEDNTNIPEKMKGWVEELIINGFTL- 302 Query: 290 AYRDAADQRADLRTLTPGPASQDG----PDV-QQAVTQAIAGLSERKVQFTYTDVLARTV 344 P PA + P++ ++ V AIA L ER +F + + Sbjct: 303 ----------------PKPAKKSTWVHRPELTREYVDSAIAHLQERNAEFCHELIEQWVF 346 Query: 345 GILPPENGVIERARAGIDEAISREQLI-----------PLDRE---KGLFTSGIHVLDEL 390 PP E + E + QLI LDRE + L+ +G H + Sbjct: 347 DQRPP--FTYEELQT---EIANHPQLIRTKNDTYTTQYALDREEKTRQLWAAGQHKFTPI 401 Query: 391 SVRALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVA 450 + + + M A +AV L I G G G+ ++ Sbjct: 402 TTGKIEFNKM--------------LNADQRNAVRNTLASSNRLIIWHGLSG-VGKTTTLS 446 Query: 451 ELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGSTVIVDQG 510 EL ++QI ++ E L E T + + +P I+D+ Sbjct: 447 ELQKHIEAINPDIQIKGYSPTTKAAGVLAEELGIETTTVSGLITRKLDTSPNQWWIIDEA 506 Query: 511 EKLSLKETLTLLDGAARHNVQVLIT---DSGQRTGTGSALMAMKDAGVNTY------RWQ 561 S ++ L +L A N +VL+ + GS ++ AG TY R + Sbjct: 507 GMKSAEQGLEVLKRAEAVNARVLLVGDINQNSSVNAGSPQRSLMKAGAETYHIKTILRQK 566 Query: 562 GGEQRPA---TIISEP-----------------DRNVRYARLAGDFAASVKAGEESVAQV 601 QR A I +P D R A++A + + + V Sbjct: 567 RIVQRRAVELVSIGKPLEALKLLNEYGHVTEVADHRTRAAQVAEKYLSLKPKERKQTLIV 626 Query: 602 SGV-REQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWN 660 +G RE+ +T IR L+ +GV + + LR + + EQ Sbjct: 627 TGTHRERKAITILIREGLRAEGV---------------IKGEDQALRQLVDKRLTTEQ-- 669 Query: 661 PETRSHDRYVIDRVTAQSHSLTLRDAQGE----------TQVVRISSLDSSWSLFRP--- 707 TR Y D + + + R +G+ + VVR+ S +S F P Sbjct: 670 --TRHLRYYKTDDYVIPNENFSSRLQKGKLYKVVGVDEASGVVRVVSQGGQYSSFDPAKL 727 Query: 708 --------EKMPVADGERLRVTGKIPGLRVSGGDRLQVASV 740 +K+ VA G++LR T L + GD+ +V +V Sbjct: 728 ENKTVFTAQKINVAVGDQLRWTRN--NLHGNNGDQFKVTAV 766 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 113/502 (22%), Positives = 212/502 (42%), Gaps = 80/502 (15%) Query: 964 ELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNML-PESERPRVVG 1022 E + L + QR A R L +S+R + G +GVGKTT + + + P+ + + G Sbjct: 407 EFNKMLNADQRNAVRNTLASSNRLIIWHGLSGVGKTTTLSELQKHIEAINPDIQ---IKG 463 Query: 1023 LGPTHRAVGEM-RSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMA 1081 PT +A G + G++ T++ + ++ +P N +++DE+ M Sbjct: 464 YSPTTKAAGVLAEELGIETTTVSGLI-----TRKLDTSP---NQWWIIDEAGMKSAEQGL 515 Query: 1082 RAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVY 1141 A R + GD +Q ++ G P R ++ A+ +K I+RQ Sbjct: 516 EVLKRAEAVNARVLLVGDINQNSSVNAGSPQR-SLMKAGAETYHIKTILRQ--------- 565 Query: 1142 SLINRDVERALSGLESV-KPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEA 1200 R V+R L S+ KP + + + E+ H E +A+ + +A Sbjct: 566 ---KRIVQRRAVELVSIGKPLEALK---------LLNEYGHVTE--VADHRTRAA----- 606 Query: 1201 FPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVM 1260 + Y P+ R+QTLIVT + +R+ + +I + G + E Sbjct: 607 ----------QVAEKYLSLKPKERKQTLIVTGTHRERKAITILIREGLRAEGVIKGEDQA 656 Query: 1261 VPVLNTANIRDGELRRLSTWETHRDALVLVDNV--------YHRIAGISKDDGLITLQDA 1312 + L + + R L ++T D ++ +N +++ G+ + G++ + Sbjct: 657 LRQLVDKRLTTEQTRHLRYYKTD-DYVIPNENFSSRLQKGKLYKVVGVDEASGVVRVVSQ 715 Query: 1313 EGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSV 1372 G P A E T++T I V GD++R+T+++ + VTAV G + Sbjct: 716 GGQYSSFDP--AKLENKTVFTAQKINVAVGDQLRWTRNNLHGN--NGDQFKVTAVEGHRI 771 Query: 1373 TLSDGQQTREIRPGQEQAEQHIDLAYAITA--HGAQGASETFAIALEGTEGNRKLMAGFE 1430 ++ + +P ++L Y+IT+ H AQG + + + GT + E Sbjct: 772 QINHKKWIDTSKP--------LELDYSITSTTHAAQGQT-YYRVIFSGTIDP---TSSRE 819 Query: 1431 SAYVALSRMKQHVQVYTDNRQG 1452 YVA+SR K + ++T+N +G Sbjct: 820 PFYVAISRQKHELYIFTENYEG 841 >UniRef50_B7KMV0 Conjugative relaxase domain protein n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KMV0_CYAP7 Length = 1170 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 136/538 (25%), Positives = 227/538 (42%), Gaps = 74/538 (13%) Query: 929 GLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEK---LTSGQRAATRMILETSD 985 G L +++ E+ I+ GK + +PL R +++ + L +GQ A I+ + + Sbjct: 374 GRLTTKSQLNRERKIIELANTGKNSRIPLASREQAQIIAQKRGLNTGQTTALIHIVTSRN 433 Query: 986 RFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMR-SAGVDAQTLA 1044 +VQG AGVGKT A+ + P + GL P+ A ++ +G+ +QTLA Sbjct: 434 AVVLVQGNAGVGKTYTMNALKQTIGNQP------IRGLAPSAAAADVLQIESGISSQTLA 487 Query: 1045 SFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQ 1104 S+L ++ P + L+DE+ M+ + M + A R + GDT QL Sbjct: 488 SYLLT-----KNERLP--KKEILLVDEAGMLSSVQMEQLLEKAQANNNRVILVGDTKQLS 540 Query: 1105 AIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVP 1164 A+ G PF+L Q S I + + ++ P L++ V + D + Sbjct: 541 AVEAGAPFKLLQEHSLPTAIIDQNLRQRDPSLKQVVDKMATHDRD--------------- 585 Query: 1165 RQEGAWAPEHSVTEFSHS--QEAKLAE-AQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTP 1221 E S+ + S + K+ + AQ+K + EAI DY RT Sbjct: 586 --------ESSINQAYQSLYHQGKVKQIAQEKERV-------------EAISNDYLSRTT 624 Query: 1222 EAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWE 1281 E R +TLI+ N D++++ + I G LG E + L ++ + + ++ Sbjct: 625 EVRNKTLILAGTNADKQIITTAIRQGLMNEGVLGSESKELQTLKRKDLDKFAITKAHHYQ 684 Query: 1282 THRDALVLVDN------VYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPD 1335 +DN Y+R+ ++ +TL D G + P + + +Y Sbjct: 685 RGDVIKFQIDNAQFSRDFYYRVTDVNSITNTVTLIDTNGVDYTL-PLDKYKQR-EVYQVQ 742 Query: 1336 TIRVGTGDRMRFTKSDRERGY--VANSVWTVTAVS--GDSVTLSDGQQTREIRPGQEQAE 1391 + + G++MRFTK+ Y + +TV + G L+ G +T + P Q Sbjct: 743 QLEIRLGEQMRFTKNISNHDYKQLNGQRFTVVGFTLYGQISLLTKG-KTMSVSPSQ---L 798 Query: 1392 QHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDN 1449 H D Y T H +QG + + I + L G ES YVA SR KQ VYT N Sbjct: 799 LHSDYRYVDTVHSSQGQTADYCIYC--ASAAKSLTIGRESFYVAASRAKQEFIVYTAN 854 Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 184/785 (23%), Positives = 327/785 (41%), Gaps = 100/785 (12%) Query: 11 GSAGNYYTD-----KDNYYVLGS--MGERWAGRGAEQLGLQGSVDKDVFTRLLEGRLPDG 63 + G YT+ ++NYY G W G+ A + GL G + + F + P+G Sbjct: 3 ATVGRCYTNPKDYAQENYYSTGDGLTNSEWLGKAASEQGLFGQIQEQHFHNAYQALDPNG 62 Query: 64 ADLSRMQDGSN---RH-RPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEA 119 L R Q+ RH RPG D+T SAPKS+S+ A++ GD +++AH AV + VE Sbjct: 63 DPLRRQQNYRKQVQRHNRPGTDVTLSAPKSISVAALVMGDNLILEAHKAAVRATMNYVEK 122 Query: 120 -LASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH-NGEWKTLSS 177 + G+ + + +A+F+HD +R+++PQLH+H V+ N T +G+W+ +++ Sbjct: 123 NCIFYQTKQKGKKLLLQSKTAQIAVFHHDDNRNKDPQLHSHCVILNQTLCPDGKWRAVAN 182 Query: 178 DKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVEA---- 233 E +Y G Y +L Q+E G + + H ++E+ GV E Sbjct: 183 ---------EQLYTQIKTIGAYYAHELARQLEQNGCKIQWTDDH-IFELAGVDKEKLDAI 232 Query: 234 FSGRSQTIR---EAVG---EDASLKSRDVAALDTRKSKQH----VDPEIKMAEWMQTLKE 283 FS RS I E +G + A+ + + L TRK K+H D E ++ W Q E Sbjct: 233 FSTRSNQIEAELEKLGLTRKTANAQVKQTLCLKTRKEKKHHHQPEDRERQLQRWKQRATE 292 Query: 284 TGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSE--------RKVQFT 335 G +I ++A PG + D +T E R+ Q Sbjct: 293 AGIEINREHKTGLEKAYNHPSHPGSIPELLSDASNILTSRQTAFREHELLKECLRQSQGK 352 Query: 336 YT-DVLARTVG----ILPPENG-------------VIERARAGIDEAI---SREQLIPLD 374 Y ++L + ++P +G +IE A G + I SREQ + Sbjct: 353 YDPNLLLAEINQKEELVPTRDGRLTTKSQLNRERKIIELANTGKNSRIPLASREQAQIIA 412 Query: 375 REKGLFTSGIHVLDELSVRALSRDIMKQNRVTV---HPEKSVPRTAGYSDAVSVLAQDRP 431 +++GL T L + V + + ++ Q V + ++ +T G + + LA Sbjct: 413 QKRGLNTGQTTALIHI-VTSRNAVVLVQGNAGVGKTYTMNALKQTIG-NQPIRGLAPSAA 470 Query: 432 SLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRR 491 + ++ + G + Q +A ++ E+ + +I+ D ++ Q E Sbjct: 471 AADVLQIESGISSQ--TLASYLLTKNERLPKKEILLVDEAGMLSSVQME----------- 517 Query: 492 QLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSA----- 546 QLLE ++V ++LS E H++ I D R S Sbjct: 518 QLLEKAQANNNRVILVGDTKQLSAVEAGAPFKLLQEHSLPTAIIDQNLRQRDPSLKQVVD 577 Query: 547 LMAMKD---AGVN-TYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVS 602 MA D + +N Y+ + + I E + R ++ D+ + ++ Sbjct: 578 KMATHDRDESSINQAYQSLYHQGKVKQIAQEKE---RVEAISNDYLSRTTEVRNKTLILA 634 Query: 603 GVR-EQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVME-QWN 660 G ++ I+T AIR L +GVLG + L LD + Y+ G V++ Q + Sbjct: 635 GTNADKQIITTAIRQGLMNEGVLGSESKELQTLKRKDLDKFAITKAHHYQRGDVIKFQID 694 Query: 661 PETRSHDRYV-IDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLR 719 S D Y + V + ++++TL D G + + +++ +++ + GE++R Sbjct: 695 NAQFSRDFYYRVTDVNSITNTVTLIDTNGVDYTLPLDKYKQR-EVYQVQQLEIRLGEQMR 753 Query: 720 VTGKI 724 T I Sbjct: 754 FTKNI 758 >UniRef50_C9CRW2 TraI n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9CRW2_9RHOB Length = 822 Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 211/838 (25%), Positives = 350/838 (41%), Gaps = 149/838 (17%) Query: 503 STVIVDQGEKLSLKETLTLLDGAARHNVQ--VLITDSGQ--RTGTGSALMAMKDAGVNTY 558 S ++VD+ LS K+ + +D A R VL+ D+ Q G M++AG+ T Sbjct: 33 SILLVDEASMLSAKDMRSFMDYAERTKAARVVLVGDTKQLDAVSAGQPFAQMQEAGMRTA 92 Query: 559 RWQGGEQRPATIISEPDRNVR---YARLAGDFAASVKAGEESVAQVSGVREQA------- 608 I + DRN++ Y + GD A + ++S+ + R+ A Sbjct: 93 VMD-------EIQRQRDRNLKAAVYDAVRGDIAGAFDKLQDSIEKADNPRQAAADKYLAL 145 Query: 609 ---------ILT----------QAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDM 649 ILT A+R LK +G L V + L P + S + Sbjct: 146 SPEDRSETRILTLNNTSRAEINSAVREGLKAEGTLLRDGVVIEGLVPRPMTSVEKSDSHN 205 Query: 650 YRPGMVMEQW--NPET--RSHDRYVIDRVTAQSHSLTL-RDAQGETQVVRISS------L 698 Y PG V++ N E + + Y I+RV +++L++ R+ GE + +++ L Sbjct: 206 YAPGEVVQPIVDNREAGLQRNTLYRIERVDHATNTLSVERETDGERISIPLAAQAGHQPL 265 Query: 699 DSSWSLFRPEKMPVADGE--RLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVV-PGRAEP 755 +S ++ E ++ GE R+R+T K GL + G R V S +T+ GR Sbjct: 266 GASLVAYQNEAREISTGEAVRVRITDKDQGL--TNGTRATVTSTENGVITLSTRDGR--- 320 Query: 756 ATLPVSDSPFTALKLENGWVETP----GHSVSDSATVFASVTQMAMDNATLNGLARSGRD 811 ++ + A LE+ + T G +V S +MA ++R+ RD Sbjct: 321 -SVEIEPQSLGARGLEHDYAATAHSVQGETVDRVIVSMNSGDRMATQKGFYVEISRA-RD 378 Query: 812 VRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLA 871 + + + A K+A + V +L + A +A+ A Sbjct: 379 EAVLITDNRVALARKIAENTGVQV-----------NALSNKLDGFFQKPEVDAVRAVSRA 427 Query: 872 LPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLL 931 + + ++ A+ DL T A +F+ G+ F ++ EINA+I+ G L G +L Sbjct: 428 VEHISERESAYLRTDLATAALTFSI-GSSFEDVDKEINARIEDGRLF----VSGKDNRVL 482 Query: 932 VSRASYEAEKSILRHILEGKEA---VMPLMERVPGE--------LMEKLTSGQRAATRMI 980 +AS E E+SI+ E +++ +P + GE ++ LT GQR++ Sbjct: 483 TDKASVELERSIIATWKESEQSEGLSIPSEQGRNGESLLIRRLSVVRTLTDGQRSSIETA 542 Query: 981 LETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVDA 1040 L + R+ VQG+AG GKT ++ + V G+ P+H+AV E+ S A Sbjct: 543 LTGTGRYVGVQGFAGTGKT----HMLERLAHYAHGAGYEVKGMAPSHQAVHELASVLGSA 598 Query: 1041 QTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDM--ARAYALIAAGGGRAVASG 1098 +TLA +T ++ E D S T+ ++DE+SM +M YA R V G Sbjct: 599 ETLAK---NTTAERHHPEDVDNSKTILVVDEASMASAKEMRDLMGYAE-RTRSPRVVFVG 654 Query: 1099 DTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTP-ELREAVYSLINRDVERALSGLE- 1156 DT QL A+A GQPF Q ++ A+M +I RQ +L+EAVY I +++ AL L+ Sbjct: 655 DTQQLDAVAAGQPF-AQLQKAGMRTAVMDDIRRQRDVDLKEAVYHSIRGEIQPALDRLDG 713 Query: 1157 SVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDY 1216 +V PR E A + + +P Sbjct: 714 NVLEVDDPRAEAA-----------------------------DRYLSLP----------- 733 Query: 1217 TGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGEL 1274 PE R+ T I+T N R +N + + K G L E+V V L+ + + +L Sbjct: 734 ----PEVRDTTRILTLTNVARSEINEAVREGMWKEGTLTGEEVTVQGLSNQQLTESQL 787 Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 117/449 (26%), Positives = 185/449 (41%), Gaps = 82/449 (18%) Query: 1061 DFSNTLFLLDESSMVGNTDMARAYALIA--AGGGRAVASGDTDQLQAIAPGQPFRLQQTR 1118 D S ++ L+DE+SM+ DM R++ A R V GDT QL A++ GQPF Q Sbjct: 29 DNSRSILLVDEASMLSAKDM-RSFMDYAERTKAARVVLVGDTKQLDAVSAGQPF-AQMQE 86 Query: 1119 SAADVAIMKEIVRQTP-ELREAVYSLINRDVERALSGLE-SVKPSQVPRQEGAWAPEHSV 1176 + A+M EI RQ L+ AVY + D+ A L+ S++ + PRQ A Sbjct: 87 AGMRTAVMDEIQRQRDRNLKAAVYDAVRGDIAGAFDKLQDSIEKADNPRQAAA------- 139 Query: 1177 TEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNED 1236 Y +PE R +T I+T N Sbjct: 140 -------------------------------------DKYLALSPEDRSETRILTLNNTS 162 Query: 1237 RRVLNSMIHDVREKAGELGKEQVMVPVL-----------NTANIRDGELRRLSTWETHRD 1285 R +NS + + + G L ++ V++ L ++ N GE+ + +R+ Sbjct: 163 RAEINSAVREGLKAEGTLLRDGVVIEGLVPRPMTSVEKSDSHNYAPGEV--VQPIVDNRE 220 Query: 1286 ALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVA------EGVTLYTPDTIRV 1339 A L N +RI + ++++ R+ P A A + Y + + Sbjct: 221 A-GLQRNTLYRIERVDHATNTLSVERETDGERISIPLAAQAGHQPLGASLVAYQNEAREI 279 Query: 1340 GTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLS--DGQQTREIRPGQEQAEQHIDLA 1397 TG+ +R +D+++G + TVT+ +TLS DG+ EI P Q + ++ Sbjct: 280 STGEAVRVRITDKDQGLTNGTRATVTSTENGVITLSTRDGRSV-EIEP-QSLGARGLEHD 337 Query: 1398 YAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAI 1457 YA TAH QG + I + G+R MA + YV +SR + + TDNR I Sbjct: 338 YAATAHSVQGETVDRVI-VSMNSGDR--MATQKGFYVEISRARDEAVLITDNRVALARKI 394 Query: 1458 --NNAVQKGTAH---DVFEPKPDREVMNA 1481 N VQ D F KP+ + + A Sbjct: 395 AENTGVQVNALSNKLDGFFQKPEVDAVRA 423 >UniRef50_B1ZQ33 Conjugative relaxase domain protein n=2 Tax=Opitutus terrae PB90-1 RepID=B1ZQ33_OPITP Length = 907 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 96/267 (35%), Positives = 146/267 (54%), Gaps = 28/267 (10%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSM---GERWAGRGAEQLGLQGSVDKDVFTRLLE 57 M+++ +R+ + + + K++Y+ G GE W G+GA+ LGL+G V VF L Sbjct: 1 MITVGVIRNGATYLSRHLCKNDYWTEGEKRIEGE-WIGKGAKALGLEGGVQTKVFDALRR 59 Query: 58 GRLPD-GADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQ 116 R P+ G L+ +D +D+ SAPK VS++AMLGGD+R++ A + +V A+ + Sbjct: 60 NRHPETGEQLTAREDKDRV--AFFDVQLSAPKDVSVLAMLGGDQRIVAAFHDSVKIALEE 117 Query: 117 VEALASTRVMTDGQSETV----LTGNLVMALFNHDTSRDQEPQLHTHAVVANVT--QHNG 170 +E A+ R G+S + LTGN ALF HDTSRD +PQLH HAV++N T G Sbjct: 118 MERFAAVR-ERRGESRSSEDFRLTGNFAGALFFHDTSRDLDPQLHAHAVLSNATWDAERG 176 Query: 171 EWKTLS-SDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGV 229 EW L ++ + +G++ V LYRE L ++ LGYET + G + + GV Sbjct: 177 EWFALQPAEMLRASGYLRQV---------LYRE-LAGRLRELGYETYGMNSTG-FSVRGV 225 Query: 230 P--VEAFSGRSQTIREAVGEDASLKSR 254 E FS R++ I++ E A K R Sbjct: 226 EHLRERFSKRTRHIQQLAEEFAQKKGR 252 Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 61/214 (28%), Positives = 91/214 (42%), Gaps = 24/214 (11%) Query: 929 GLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFT 988 G + R + E + +R ++EG+ PL + L E+LT GQ AA R +L D + Sbjct: 371 GEMSLRPIHREETATIRRVVEGRNTRFPLGDATL--LPERLTRGQLAAARALLANKDFLS 428 Query: 989 VVQGYAGVGKTTQFRAVMSAVN------MLPESERPRVVGLGPTHRAVGEMRSAGVD-AQ 1041 V+ G AG GKTT A+ A LP L PT RA + AG + A Sbjct: 429 VLVGDAGTGKTTVLTAIQDAHRAAGGQPFLP---------LTPTTRAREALVDAGFERAD 479 Query: 1042 TLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTD 1101 T+ FL LQ + + L+DE+ ++ + R + R + GDT Sbjct: 480 TVQRFLVSETLQAEA------VRRVLLVDEAGLLSTEQLDRLTRIAQERRARVLLVGDTK 533 Query: 1102 QLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPE 1135 Q ++ G R S V + E++RQ E Sbjct: 534 QHYSVQRGDAMRNVIRNSGTPVVRLSEVLRQREE 567 >UniRef50_UPI00016C3594 TrwC protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3594 Length = 896 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 195/770 (25%), Positives = 323/770 (41%), Gaps = 81/770 (10%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRL 60 ++ + VRS+ A YY+ D Y + W G GA LGL G+V++ F R+ + Sbjct: 8 VLRVMVVRSSKGAKQYYSAGDYYSAGQELPGEWGGIGAAHLGLTGTVERGEFARMCDNFH 67 Query: 61 PDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEAL 120 P ++ +R R +DL + PKS+S++ L L+ A QAV+ +R++E Sbjct: 68 PRTGQRFTLRTNVSR-RVAFDLNWHVPKSLSVLFGLTQSAELLAAFRQAVEETMRELELR 126 Query: 121 ASTRVMTDGQSETVLTGNLVMALFNHDTSRD----QEPQLHTHAVVANVTQH--NGEWKT 174 A TRV G ++ TGNL A + H T+R +P LH HAVV N T G WK Sbjct: 127 AQTRVRIKGANQVRTTGNLTWASYVHTTARPVGGVPDPHLHCHAVVFNATFDPIEGRWKA 186 Query: 175 LSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP---V 231 L +V + F + +L ++ LGY+T K WE+ GVP + Sbjct: 187 LDLCQVKRAAPY---------FEATFHARLAAKLRHLGYDTVRTSKG--WELAGVPRRVL 235 Query: 232 EAFSGRSQTIREAVGEDASL---KSRDVAALDTRKSKQHVDPEIKM-AEWMQTLKETGFD 287 E FS R++ I E V E+ + ++D TR+ K K+ A W + TG + Sbjct: 236 EEFSRRTKLI-ERVAEEQEITNAHAKDAIGALTRERKSTALSLSKLRARWRARI--TGDE 292 Query: 288 IRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGIL 347 +RA A + L P + + V+ A+ A+ ER+ + +LA + Sbjct: 293 LRALELVAA-----KALDRPPRNLNA--VRDALHYAVEHCFERESAVSVDRLLA-----V 340 Query: 348 PPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVL-DELSVRALSRDIMKQNRVT 406 GV E A I A L+ +R+ + + VL +E+ + A +RD Sbjct: 341 ALRRGVGEVAVNEIRAAFKGLGLLVQERDGVEYATAREVLAEEIRMLAFARDGRGICARL 400 Query: 407 VHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAA--GQRERVAELVMMAREQGREVQ 464 V + R ++ + +A S V+ GAA G+ + E V + G V Sbjct: 401 VPNHSPIAREWLSNEQKAAVAHVLGSHDRVTLLRGAAGVGKTALMIEAVEAIEKSGTRVI 460 Query: 465 IIAADRRSQMNMKQDERLSGELITGRRQLLEGMAF---TPGSTVIVDQGEKLSLKETLTL 521 +A + + + E S R L F G + VD+ L L Sbjct: 461 PLAPSAAASRGVLRAEGFSSADTVAR--FLVDAEFQERARGHVIWVDEAGLLGTVALAAL 518 Query: 522 LDGAARHNVQ-VLITDSGQRTGT--GSALMAMK-DAGVNTY-----RWQGGEQRPAT--- 569 D A R + + VL+ D+ Q +G G+AL ++ +AG+ + R Q G R A Sbjct: 519 FDTAGRLDARVVLVGDTRQHSGVARGTALKLLECEAGLAPFAVTGIRRQHGRYREAVGLL 578 Query: 570 ----------------IISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQA 613 + E D +A ++ + + G+ + E +T+ Sbjct: 579 SEGRAVDALDVLDRLGWVRECDHEAGAQLIAAEYLLAHREGKSVLVVSPTHAEGERVTRT 638 Query: 614 IRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWN--PETRSHDRYVI 671 IR+EL + VL L R Y PGMV++ + P RS R+V+ Sbjct: 639 IRTELLSAQVLSGEPRFFPQLVAANFTIAERSDAANYEPGMVLQFFRHAPGFRSASRWVV 698 Query: 672 DRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVT 721 V+A + L ++DA G+ ++ + + + +F ++ + G+R+R+T Sbjct: 699 --VSAAPNVLRVQDASGDDALLPL-HFANRFQVFESRELELRIGDRVRLT 745 Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 123/529 (23%), Positives = 199/529 (37%), Gaps = 97/529 (18%) Query: 967 EKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPT 1026 E L++ Q+AA +L + DR T+++G AGVGKT + A+ E RV+ L P+ Sbjct: 410 EWLSNEQKAAVAHVLGSHDRVTLLRGAAGVGKTALMIEAVEAI----EKSGTRVIPLAPS 465 Query: 1027 HRAV-GEMRSAGV-DAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAY 1084 A G +R+ G A T+A FL D + Q+R+ + +DE+ ++G +A + Sbjct: 466 AAASRGVLRAEGFSSADTVARFLVDAEFQERA------RGHVIWVDEAGLLGTVALAALF 519 Query: 1085 ALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLI 1144 R V GDT Q +A G +L + + + I RQ REAV L Sbjct: 520 DTAGRLDARVVLVGDTRQHSGVARGTALKLLECEAGLAPFAVTGIRRQHGRYREAVGLLS 579 Query: 1145 NRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDV 1204 AL L+ + W V E H A+L A Sbjct: 580 EGRAVDALDVLDRL----------GW-----VRECDHEAGAQLIAA-------------- 610 Query: 1205 PMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVL 1264 E ++ G++ L+V+ + + + I A L E P L Sbjct: 611 -----EYLLAHREGKS------VLVVSPTHAEGERVTRTIRTELLSAQVLSGEPRFFPQL 659 Query: 1265 NTANIRDGELRRLSTWETHRDALVLVDNVYHRIAG---------ISKDDGLITLQDAEGN 1315 AN E + +E +V + G +S ++ +QDA G+ Sbjct: 660 VAANFTIAERSDAANYEPG-----MVLQFFRHAPGFRSASRWVVVSAAPNVLRVQDASGD 714 Query: 1316 TRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLS 1375 L+ A ++ + + GDR+R T ++R R D L Sbjct: 715 DALLPLH--FANRFQVFESRELELRIGDRVRLTSNERTR---------------DGHRLD 757 Query: 1376 DGQQ---TREIRPGQEQAEQ---------HIDLAYAITAHGAQGASETFAIALEGTEGNR 1423 +G R G Q E H+ Y +T+H +QG T L Sbjct: 758 NGAHGVVKRFTSNGDIQLESGAVVPYDVGHVAHGYCVTSHASQG--RTVDQVLVSQSAES 815 Query: 1424 KLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEP 1472 + E YV++SR ++ V + TD++ G A + + A ++F P Sbjct: 816 FAASSVEQLYVSVSRGRERVLLITDDKAGLRLAAERSDPRPAATEIFAP 864 >UniRef50_B8HZ01 Conjugative relaxase domain protein n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HZ01_CYAP4 Length = 1665 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 91/246 (36%), Positives = 132/246 (53%), Gaps = 22/246 (8%) Query: 33 WAGRGAEQLGLQGSVDKDVFTRLLEGRLPDGADLSRMQ--DGSNRHRPGYDLTFSAPKSV 90 W G+GA +LGL G V + F + G P G + R + + + R +DLT SAPKSV Sbjct: 52 WYGKGAARLGLVGIVQRQDFQSVFYGDQPGGQERIRGERPNPDTKERLAHDLTLSAPKSV 111 Query: 91 SMMAMLGGDKRLIDAHNQAVDFAVRQVEA-LASTRVMTDGQSETVLTGNLVMALFNHDTS 149 SM LGGD+RL AH +AV + VE+ A TRV DG+ + TG+L+ A+ H TS Sbjct: 112 SMTLHLGGDERLFQAHLEAVQETLDLVESRYAQTRVQIDGERRVMRTGHLIAAILPHHTS 171 Query: 150 RDQEPQLHTHAVVANVT-QHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQV 208 R+ + QLH H V+ N T +G W++L + + N G YR +L ++V Sbjct: 172 REGDLQLHCHCVLMNGTFCPDGNWRSLWHEGM----------VNAEWLGSYYRLRLAQKV 221 Query: 209 EALGYETEV--VGKHGMWEMPGVP---VEAFSGRSQTI---REAVGEDASLKSRDVAALD 260 + LGY + + + G +E+ G +EAFS RS+ I E + + +RD A L Sbjct: 222 QDLGYAIDETRLEQGGAFEIQGYSREAIEAFSKRSRQIVAYLEQHRQCVNSATRDGAVLT 281 Query: 261 TRKSKQ 266 TRK+KQ Sbjct: 282 TRKAKQ 287 Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 132/554 (23%), Positives = 244/554 (44%), Gaps = 89/554 (16%) Query: 929 GLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGE-LMEK--LTSGQRAATRMILETSD 985 G + + E E + LR ++G+ PLM+ + L+E+ L SGQ A I+ D Sbjct: 381 GRFTTVTALEREITTLRDWMQGQGKTTPLMDETTAQALLERSALNSGQATAIAGIVSAGD 440 Query: 986 RFTVVQGYAGVGKTTQFRAVMSAVNMLPESE-RPRVVGLGPTHRAVGEM-RSAGVDAQTL 1043 + ++ G +GVGKTT R + ++ ES+ +P + G PT A + +S + T+ Sbjct: 441 QHLILHGLSGVGKTTALRELK---RLIQESDSKPDIRGYSPTIAAAATLAQSLQISTSTV 497 Query: 1044 ASFLHDTQLQQRSGETPD-FSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQ 1102 S + + P+ ++ L+++DE+ M+ MA A G R + GD Q Sbjct: 498 ESLVL---------KPPEPLADQLWIIDEAGMISARQMAIILKKANAVGARLLLVGDPRQ 548 Query: 1103 LQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQ 1162 AI G P R + A ++EI+RQ ++ R VE +G Sbjct: 549 NPAIEAGSPMR-SLIQHGATTFSLREIIRQQNAVQ-------RRAVELMATG-------- 592 Query: 1163 VPRQEGAWAPEHSVTEFS-HSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTP 1221 P H+++ + H ++++ Q ++ +AI + + Sbjct: 593 --------HPVHALSLLTEHGYVQEISDPQARS---------------QAIAHQWLTLSD 629 Query: 1222 EAREQTLIVTHLNEDRRVLNSMI-HDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTW 1280 R+ TLIVT N +RR ++ + +R++ G LG++Q+ ++N + +LR W Sbjct: 630 SERQNTLIVTGTNAERRAIHQQLRRGLRDEEG-LGEDQLFRQLINRQLTTEQKLR----W 684 Query: 1281 ETHR--DALVLVDNVYHRIAGISKDDGLITLQD------AEGNTRLISPREAVAEGVTLY 1332 E +R D + L N + G + ++ ++D +EG RL+ A ++ Sbjct: 685 ENYRVGDYIRLHRNYESTLLGKGRLYQVVGIRDRQLLVESEGG-RLLWFDPARYRDKEVF 743 Query: 1333 TPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQE---- 1388 I + G+++R+T +DR+ G + S +V ++ D +T+ D Q GQE Sbjct: 744 KTGEIAIAPGEQLRWTLTDRKTGQINGSQVSVREINDDHLTVVDDQ-------GQEWRIN 796 Query: 1389 -QAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYT 1447 + +D A+ TA+ AQG + I + E YV +SR + +Q+Y Sbjct: 797 GRLPLTLDYAHVTTAYSAQGLTAERVI----VSATNNPTSAQEPFYVKISRQVRELQIYV 852 Query: 1448 DNRQGWTDAINNAV 1461 ++ +G + + +V Sbjct: 853 EDLEGLREWVGRSV 866 >UniRef50_A8ZL36 Putative uncharacterized protein n=2 Tax=Acaryochloris marina MBIC11017 RepID=A8ZL36_ACAM1 Length = 1861 Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 111/364 (30%), Positives = 175/364 (48%), Gaps = 49/364 (13%) Query: 33 WAGRGAEQLGLQGSVDKDVFTRLLEGRLPD------GADLSRMQ----DGSNRHRPGYDL 82 W G A L V ++ F L G LP+ G + R++ + ++ R +D+ Sbjct: 6 WVGSNAIVQKLGTYVKREDFKALSRGFLPEALKSVAGGAVQRIRGKKPNEEDKERHAHDV 65 Query: 83 TFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVE-ALASTRVMTDGQSETVLTGNLVM 141 SAPKSVSM L GD R+ DAH +AV +E A TR+ +G V TGN++ Sbjct: 66 VLSAPKSVSMALHLEGDNRIFDAHMEAVLETFELLEREYAQTRIQVNGVRSVVDTGNMIA 125 Query: 142 ALFNHDTSRDQEPQLHTHAVVANVTQ-HNGEWKTLSSDKVGKTGFIENVYANQIAFGRLY 200 AL H TSRD + QLHTH ++ N TQ +G W++LS +K+ + +I G Y Sbjct: 126 ALMPHHTSRDGDMQLHTHMLIMNGTQGPDGRWRSLSHEKLAQAKWI----------GSFY 175 Query: 201 REKLKEQVEALGYETEVVGKHGMWEMPGV---PVEAFSGRSQTIREAV---GEDASLKSR 254 R+KL E+V+ LGY + +E+ G VE FS R + I +AV G + + +++ Sbjct: 176 RQKLAEKVQRLGY--RIYQTKDAFELVGYDRSDVEVFSKRHRAIVKAVRDEGLEVTPENK 233 Query: 255 DVAALDTRKSKQHVDPEIKMAE--WMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQD 312 + L TRK+K+ V ++++ + W + + G A+ + P P Sbjct: 234 KLKVLPTRKAKRGVGKKLEIIQDHWREEARSQGVGHPVL-------AEPLAVLPDPGR-- 284 Query: 313 GPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISR-EQLI 371 + V AI +E F D+ A L + +E+ +DEAI + ++LI Sbjct: 285 ---ARYEVESAIRHYAEWSSIFEKDDIYAYVFKTLKRQGMAMEQ----VDEAIKQSKELI 337 Query: 372 PLDR 375 P+DR Sbjct: 338 PVDR 341 Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 116/516 (22%), Positives = 215/516 (41%), Gaps = 76/516 (14%) Query: 968 KLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTH 1027 KL Q L ++D + + QG+ GVGK+ + + +N + R G PT Sbjct: 381 KLNEDQAKTILNTLTSTDHYQIWQGFPGVGKSRTLGVLKTLLNGSGFTIR----GFSPTI 436 Query: 1028 RAVGEMRSA-GVDAQTLASF-LHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYA 1085 A +++ G+ T+ LH + D N ++L+DE+ M+ M Sbjct: 437 PAAKKLQDELGITTNTVEHLVLH---------QVDDSPNQVWLIDEAGMMSRRQMKVILE 487 Query: 1086 LIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLIN 1145 A + + GD Q +I G PF+ Q A I +EI+RQ ++++ LI Sbjct: 488 KAEAVKAQVIFVGDAGQNSSIEAGNPFKFMQANGATTHRI-EEIIRQKVDVQKQAVELIA 546 Query: 1146 RDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVP 1205 R R ++ LE + + + G +A++A+A + + +P Sbjct: 547 RG--RGIAALELLDANGYVIESGC--------------KAEMAQA------AADQYLALP 584 Query: 1206 MTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLN 1265 + + +E+TLI+ NE+R I ++AG LG+ +V L Sbjct: 585 L---------------KEQEETLIIAGTNEERLDTEQAIRRGEKQAGRLGESSKIVQ-LK 628 Query: 1266 TANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNT--------R 1317 + N+ + RR+ W D + L+ + A I + + L ++ EG+ R Sbjct: 629 SRNLSIEQKRRVD-WYRKGDYVRLLQTSH--TASIKRGE-LYKVEKREGDELVVSSFGGR 684 Query: 1318 LISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDG 1377 L + A + +Y+ V GD++R+T + +E ++ TVTA+ G ++ + D Sbjct: 685 LYRFKPAKYKLKEVYSAHKFDVAVGDKLRWTTTIKENNWINGQQLTVTALDGLNMKVRD- 743 Query: 1378 QQTREIRPGQEQAEQHIDLAY--AITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVA 1435 E R Q + L Y T++ +Q S+ I + T +R + E V Sbjct: 744 ---HEGRSHDVPLTQPLALEYDRVWTSYRSQSGSKKRTIVI--TTNDR--TSSREPFLVD 796 Query: 1436 LSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFE 1471 +SR + + VYT++ + + + + +A D+ E Sbjct: 797 ISRQEHELTVYTESLNKLRNRVAKSNAQKSALDLIE 832 >UniRef50_A8ZPA5 TrwC protein, putative n=1 Tax=Acaryochloris marina MBIC11017 RepID=A8ZPA5_ACAM1 Length = 657 Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 100/310 (32%), Positives = 163/310 (52%), Gaps = 38/310 (12%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRL 60 M+S ++V G G+Y+ +D G W G+GA++LGL G V + + G Sbjct: 1 MISNSKVSGRG-LGHYHAREDGQEAPG----HWIGQGAKELGLNGEVKRADLEAVAHGTA 55 Query: 61 PDGADL----SRMQDGSNR--HRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAV 114 P+G L S+ + GS R HR G D TFS PKSVS++ ++GGDKR+I+AH AV + Sbjct: 56 PNGMRLKAKRSQWRQGSYRNGHRAGTDATFSPPKSVSIIGLVGGDKRVIEAHEHAVLDTL 115 Query: 115 RQVEALAS-TRVMTDGQSETVLTGNLVMALFNHDTSRDQE-----PQLHTHAVVANVTQ- 167 +++E S ++ T G +TG L++A F+H T+R + PQ+HTH+++ N T+ Sbjct: 116 KEIEETCSIAKIRTGGIRRNEVTGKLIIAKFDHRTTRPNDQGIPMPQIHTHSLIFNSTKC 175 Query: 168 HNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGY--ETEVVGKHGMWE 225 +G+W++L + K +T ++ R Y L E+++ +GY ++E G H ++ Sbjct: 176 KDGKWRSLENWKFFRT--------DKKRLRRHYINGLGERLKEIGYRIKSERDGLH--FQ 225 Query: 226 MPGVPVE---AFSGRSQTIREAVGEDAS---LKSRDVAALDTRKSKQHVDPEIKMAEWMQ 279 + G+ A+S R++ I +GE A+ K AAL TR K + E +W + Sbjct: 226 VEGITRSQELAYSERTKEIERELGESANGVRYKKGRFAALKTRNPKVPFEHERVHKQWKE 285 Query: 280 TLKETG--FD 287 G FD Sbjct: 286 MAYREGIAFD 295 >UniRef50_A6Q5N5 Putative uncharacterized protein n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q5N5_NITSB Length = 961 Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 94/272 (34%), Positives = 145/272 (53%), Gaps = 38/272 (13%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQG--SVDKDVFTRLLEG 58 M+SI++ ++ A +YY + +NYY S + G A +G++ V KD F LL Sbjct: 1 MISISKFQNKDQASSYYQE-ENYYQKNSENGFFHGAAAPAVGVKNGQEVTKDTFQSLLNN 59 Query: 59 -RLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVS-MMAMLGGDK------RLIDAHNQAV 110 G L++ + + R G+D+TFSAPKSVS MM L + +L +AH +A Sbjct: 60 THAITGEALTK--NTTANKRAGFDVTFSAPKSVSVMMEALQANGLTEEALKLREAHERAT 117 Query: 111 DFAVRQVEALASTRVMTD-GQSETVLTGNLVMALFNHDTSR-----DQEPQLHTHAVVAN 164 A+ ++ A TR+ + G+ E + G +V A F HDT+R + +PQLHTH + N Sbjct: 118 QKAMEEIGKYALTRIRNEAGEIERIKAG-IVYASFQHDTTRITPSGNIDPQLHTHNFIFN 176 Query: 165 VTQH---NGEWKTLSSDKVGKTGFIEN--VYANQIAFGRLYREKLKEQVEALGYETEVV- 218 V + NGE+ KTG IEN +Y N++ FG+LYR +L ++ LGY+ E Sbjct: 177 VVSYVDKNGEF---------KTGAIENFGIYKNKMYFGQLYRNELANNLKELGYKIEFTD 227 Query: 219 GKHGMWEMPGVPVE---AFSGRSQTIREAVGE 247 K+G +E+ E FSGRS+++R + E Sbjct: 228 AKNGFFELQDFKKEELKEFSGRSKSMRALIEE 259 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 54/178 (30%), Positives = 86/178 (48%), Gaps = 12/178 (6%) Query: 969 LTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPR--VVGLGPT 1026 +T GQ+ IL + +F V+QG AG GKT M A+ E+E+P ++GL T Sbjct: 429 MTVGQKEMFSKILISDSQFMVIQGDAGTGKTYS----MKALKEFLEAEQPNREIIGLSFT 484 Query: 1027 HRAV-GEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYA 1085 +A G +G+ + T+ SFL+ + E + L ++DE+ +VG+ +A+ Sbjct: 485 GKAAAGLEEDSGIKSSTIHSFLYS----EAKDEFKESKERLIIVDEAGLVGSRQIAKIIK 540 Query: 1086 LIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSL 1143 + + V GD Q +AIA G F Q R A + + E +RQ E + V L Sbjct: 541 IAKKNNDKVVFVGDVKQFKAIAAGDIFAEMQRRGAETIT-LGETLRQKTEFTKEVVRL 597 >UniRef50_O68714 DNA helicase I homolog n=20 Tax=Enterobacteriaceae RepID=O68714_YERPE Length = 138 Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 61/123 (49%), Positives = 84/123 (68%), Gaps = 1/123 (0%) Query: 1306 LITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVT 1365 L+TL +AEG + LISP++ A+ ++L+ P + V GDR+RFT+SD +RGYVANS+W V Sbjct: 10 LVTLSNAEGESVLISPQQNTAQDISLFMPRELTVSQGDRVRFTRSDTDRGYVANSLWEVA 69 Query: 1366 AVSGD-SVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRK 1424 + D +V G Q + + P + ++HIDLAY +TA+G QGASE F IAL G EG RK Sbjct: 70 GFTEDGAVRFRQGDQEKIVDPQKATEDRHIDLAYTLTAYGVQGASERFVIALFGAEGGRK 129 Query: 1425 LMA 1427 MA Sbjct: 130 RMA 132 >UniRef50_D0KZB2 Conjugative relaxase domain protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KZB2_HALNC Length = 943 Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 92/286 (32%), Positives = 136/286 (47%), Gaps = 23/286 (8%) Query: 15 NYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRLPDGADLSRMQDGSN 74 N+ K YY W G A LGL GSV +LL G L DG +R Sbjct: 23 NHPDQKSGYYDAKGAPSAWGGALAADLGLSGSVQAADLKKLLSGELSDG---TRFAKEDP 79 Query: 75 RHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEALASTRVMTDGQSETV 134 R G D++FSAPKSVS+ A++GGD+R+I AH+ AV A+ +E +T V Sbjct: 80 DRRLGIDMSFSAPKSVSLAALVGGDERIIQAHDAAVRTAMSMIEQEYATARFGHAGRNVV 139 Query: 135 LTGNLVMALFNHDTSRD----QEPQLHTHAVVANVTQHNGEWKTLSSDKV-GKTGFIENV 189 +G LV A + H+ +R +PQLHTH +V+N+T K S D G+ G Sbjct: 140 CSGKLVYAAYRHEDARTVDDIADPQLHTHCIVSNITIDPETGKPRSIDFAWGQDGI---- 195 Query: 190 YANQIAFGRLYREKLKEQVEALGYETEVVGK-HGMWEMPGVPVEAFSGRSQTIREAVG-- 246 ++A G +YR +L +++ +GYE + + ++ VE FS R + +A+ Sbjct: 196 ---KLA-GAMYRAELARRLKEMGYELRKSEEGFELAQISDEQVETFSRRRVQVDQALEQQ 251 Query: 247 ----EDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDI 288 E AS + + L TR+ K + E + EW Q E D+ Sbjct: 252 GTDREHASSELKTAVTLATRQGKAQLSAEDQYEEWQQRAAEAELDL 297 Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 128/488 (26%), Positives = 213/488 (43%), Gaps = 51/488 (10%) Query: 968 KLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTH 1027 + + GQR A + T+D+ + + G AG GKTT M V L +S+ VVG+ P+ Sbjct: 421 RFSEGQRRAINLTATTTDQVSGIVGAAGAGKTT----AMKTVADLAKSQGLTVVGIAPSS 476 Query: 1028 RAVGEMRSAGV-DAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYAL 1086 A E++SAG D TLA+F GE L +LDE+ MV D AL Sbjct: 477 AAADELKSAGADDTMTLATF-------NLKGEAA--GPRLLILDEAGMVSARD---GEAL 524 Query: 1087 IAAGG--GRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPE-LREAVYSL 1143 + G R + GD QL A+ G PF A A + EI RQ + L + Sbjct: 525 LKKLGKEDRLIFVGDPKQLAAVEAGSPFAQLMRSGAIQYAEITEINRQKDQKLLDIAQHF 584 Query: 1144 INRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPD 1203 E A++ L + ++VP PEH +T + ++ +LA Sbjct: 585 AKGKAEEAVA-LATKYVTEVPVTLPD-KPEHKITRQAKTEARRLA--------------- 627 Query: 1204 VPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPV 1263 + A + Y + E R TL+++ N R+ +N + GE+ E V Sbjct: 628 ----IASATAKRYLELSQEERATTLVLSGTNAVRKQVNEQVRKGLIDKGEINGESFTVST 683 Query: 1264 LNTANIRDGELRRLSTWETHRDALVLVDNVYH-RIAGISKDDGLITLQDAEGNTRLISPR 1322 L+ A++ ++R+ ++ + + ++ D LI ++ ++G + I Sbjct: 684 LDKADMTRAKMRKAGNYKPGQVIKTAGKQAEQSEVVAVNLDQNLIQVKLSDGTLKSIDAS 743 Query: 1323 EAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVS-GDSVTLSDGQQTR 1381 + ++ P I + GD++ FT +D+ N + + + G ++ S+G + Sbjct: 744 RFDVKKTQVFNPRQIDIAAGDKIIFTNNDQATETKNNQIGLIEEIKDGKAIINSNGAKV- 802 Query: 1382 EIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQ 1441 EI Q + HID AY IT H +QG +T + E +R A E+AYVA +R + Sbjct: 803 EIDI---QRKLHIDHAYCITIHRSQG--QTVDSVIVAGEASRTTTA--EAAYVACTRERY 855 Query: 1442 HVQVYTDN 1449 +++ TDN Sbjct: 856 KLEIITDN 863 >UniRef50_Q21BL3 Putative ATP-dependent exoDNAse (Exonuclease V) alpha subunit n=1 Tax=Rhodopseudomonas palustris BisB18 RepID=Q21BL3_RHOPB Length = 379 Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 100/301 (33%), Positives = 147/301 (48%), Gaps = 24/301 (7%) Query: 1 MMSIAQVRSAGSAGNYYT--DKDNYYVL-GSMGERWAGRGAEQLGLQGSVDKDVFTRLLE 57 + SI+ +A SA YY +D+YY G RWAGRGAE+L L V + F L+ Sbjct: 2 VASISARGNAASALRYYAHLQRDDYYSREGEPPGRWAGRGAERLSLVEPVTQGEFDAALQ 61 Query: 58 GRLPD-GADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAML--GGDKRLID-AHNQAVDFA 113 G P G L+++ H G+D+TFSAPKSVS++ L D+ I+ H AV A Sbjct: 62 GVDPKTGERLAQIGGRGREHSAGWDMTFSAPKSVSVLWALSDAHDREGIEQGHRSAVLAA 121 Query: 114 VRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVT-QHNGEW 172 ++EA A G + T L+MA F+H TSR+ +PQLHTHA + N+ + +G W Sbjct: 122 TARLEATAGWARRGRGGATRERTAGLLMAQFDHHTSRESDPQLHTHAFIFNLAPRRDGSW 181 Query: 173 KTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVE 232 + S +Y Q G YR+ L ++E G E + + + +P + Sbjct: 182 GAILS---------RELYKAQKHAGATYRQALASELERRGIRLER--QKDTFRVAAIPRD 230 Query: 233 ---AFSGRSQTIREA--VGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFD 287 AFS R Q I EA + ++ K ++A L TR+ KQ + W K GF+ Sbjct: 231 VERAFSKRRQAIEEAARIHGYSTPKGMELATLRTRRPKQDARLGDLIKHWQAEAKALGFE 290 Query: 288 I 288 + Sbjct: 291 L 291 >UniRef50_B6ASB0 Conjugal transfer protein, TraA n=6 Tax=Leptospirillum RepID=B6ASB0_9BACT Length = 976 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 125/452 (27%), Positives = 216/452 (47%), Gaps = 54/452 (11%) Query: 21 DNYYVLGSMG--ERWAGRGAEQLGLQGSVDKDVFTRLLEGRLPDGADLSRMQDGSNRHRP 78 ++YY GS RW G A +LGL G+V++D L+G P + + G +R R Sbjct: 36 EDYYSQGSEATPSRWLGGAAAELGLSGAVNRDHLLATLQGFDPRTGEALVQKAGVDR-RY 94 Query: 79 GYDLTFSAPKSVSMMAMLGGD--KRLI-DAHNQAVDFAVRQVE---ALASTRVMTDGQSE 132 +DLTFSAPKSVS+ +G + KR I DA ++AV+ + +E ALA +G + Sbjct: 95 AFDLTFSAPKSVSIAWAVGTEEVKRGIEDAQDRAVERTLAFIEEKFALARRGSSKEG-TI 153 Query: 133 TVLTGNLVMALFNHDTSRDQEPQLHTHAVVANV-TQHNGEWKTLSSDKVGKTGFIENVYA 191 T L+ A++ H +SR+ +PQ+H+HA++ N+ + +G W L+ + ++ Sbjct: 154 TKEHVKLLSAVYRHGSSRELDPQIHSHAMLQNMGLRADGTWGALNE---------KELFE 204 Query: 192 NQIAFGRLYREKLKEQV-EALGYETEVVGKHGMWEMPGVPVE---AFSGRSQTIREAVGE 247 ++A G +YR +L ++ + LG+ E ++ + +PG+P E FS R I +A+ E Sbjct: 205 WKLALGAVYRAELSSEISKNLGFGIEADREY--FRLPGIPKELEEEFSKRRVQIEKALKE 262 Query: 248 D--ASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLT 305 + K+ +VAALDTRK K+ V+ EI EW + E G + + R R Sbjct: 263 KGLSGGKAAEVAALDTRKGKEVVEAEILSEEWKKIAGEYGITAESLQGL---RGMERESN 319 Query: 306 PGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGV-IERARAGIDEA 364 S D P++ + +T A E+ L R G+ +NG ++ +A + Sbjct: 320 HDSFSLDRPELLRKLTTMEAVFQEKD--------LFRVAGVACSQNGRGLDDVKAEVAAC 371 Query: 365 ISREQLIPLDREKG--LFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYS-- 420 + +++ L + G +T+ + E +++++R + R V PE + A Y Sbjct: 372 LKDPEIVKLRGKDGEIYYTTQEMLALEQEIQSMARAGKEDARHVVFPEATKAGIARYEFE 431 Query: 421 ----------DAVSVLAQDRPSLAIVSGQGGA 442 +A+ L + I+ G GA Sbjct: 432 KGFKLSDEQHNAIEHLTTQAGRIRILEGHAGA 463 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 53/182 (29%), Positives = 83/182 (45%), Gaps = 12/182 (6%) Query: 939 AEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGK 998 A K RH++ EA + R E KL+ Q A + + R +++G+AG GK Sbjct: 407 AGKEDARHVV-FPEATKAGIARYEFEKGFKLSDEQHNAIEHLTTQAGRIRILEGHAGAGK 465 Query: 999 TTQFRAVMSAVNMLPESERPRVVGLG-PTHRAVGEMRSAGVDAQTLASFLHDTQLQQRS- 1056 +T V A+ E+ V+G +A G + G+ +QTLAS L + Q +R Sbjct: 466 STALVPVRYAL----EASGFEVIGASLQGKKAAGLQKDTGIRSQTLASLLRELQGYERED 521 Query: 1057 GE----TPDFS-NTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQP 1111 GE T S T+ ++DE++M MA G + + GD Q+ +A G P Sbjct: 522 GEKVPPTRILSEKTVVVVDEAAMNDTRLMAGLIRETEKAGAKLILVGDESQVPPVAAGNP 581 Query: 1112 FR 1113 F+ Sbjct: 582 FK 583 >UniRef50_B5YII1 Putative uncharacterized protein n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YII1_THEYD Length = 1843 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 93/310 (30%), Positives = 145/310 (46%), Gaps = 33/310 (10%) Query: 864 AQQAIHLALPVVESKKLAFSMVDLLTEAKSFAA-------------EGTGFTELGGEINA 910 A++ I+ A+ V + FS DL A +A E E+G + Sbjct: 214 AKEIINKAIDEVIDRNSTFSQSDLFKAAFQISAGRVDSDTLVQAVKENERLIEMGYVQDK 273 Query: 911 QIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLT 970 Q R + Y + S+ E +IL+ I EGK +V + E+ EKLT Sbjct: 274 QHNRANATYQE-------KYFTSQEVIAWEHNILKSIEEGKGSVEKITEQRYEN--EKLT 324 Query: 971 SGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMS----AVNMLPESERPRVVGLGPT 1026 Q A IL+++DR+T V G+AGVGKTT F MS +N + + R++G+ T Sbjct: 325 KSQLEAINHILQSTDRYTAVVGWAGVGKTT-FVGEMSKELGKINEIAKEAGYRLIGVSNT 383 Query: 1027 HRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYAL 1086 + AV E++ G++A T A FL+ + Q S T+ ++DE+S + DM+ Sbjct: 384 NTAVNELKEVGIEAMTTAKFLNSAKALQSLD-----SKTILIVDEASFLSTKDMSTILDK 438 Query: 1087 IAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQ-TPELREAVYSLIN 1145 G R V GD QL + G PF + + M +IVRQ EL+ AVY + + Sbjct: 439 TRESGCRIVFIGDDRQLPGVQAGSPFAALIRENKINHVKMTDIVRQRNEELKSAVYDIYH 498 Query: 1146 RDVERALSGL 1155 +++E AL+ + Sbjct: 499 KNIESALNKI 508 Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust. Identities = 50/232 (21%), Positives = 106/232 (45%), Gaps = 28/232 (12%) Query: 1234 NEDRRVLNSMIHDVREKAGEL-GKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVD- 1291 N+D ++LNS+I + + GEL G + + V V N+ + E + S++ LV+ Sbjct: 692 NQDAKILNSLISE-ELRNGELKGAKSIEVNVWVNKNLDNVERLKASSYNVGDKLLVMSSG 750 Query: 1292 -------NVYHRIAGISKDDGLI--TLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTG 1342 ++ + I K+ + T + E R+ + E + + V + ++I++ G Sbjct: 751 GGVSVGKELFVKEVDIVKNTLKVEYTTKKGEVKERVFNI-EKLGDKVQAFQNESIQIAEG 809 Query: 1343 DRMRFTKSDRERGYVANSVWTVTAVSGD--SVTLS---DGQQTREIRPGQEQAEQ--HID 1395 +++ F + R + + + V +++ + S+T+ D + + +E+ Q H Sbjct: 810 EKLIFNNTYRNKNFANSEFAYVKSINNEDGSITIVSKLDSDKAKTTTFTKEELAQGVHFQ 869 Query: 1396 LAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYT 1447 YA+TA QG + IA E +E+ V+++R KQ+ +Y+ Sbjct: 870 HGYAVTADHMQGKTTQNVIAFE--------TRNYENFLVSITRAKQNATIYS 913 >UniRef50_B5JHM8 TrwC relaxase family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JHM8_9BACT Length = 931 Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 186/767 (24%), Positives = 312/767 (40%), Gaps = 107/767 (13%) Query: 15 NYYTDKDNYYVLGSMGERWAGRGAEQLGLQGS-VDKDVFTRLLEGRLPDGADLSRMQDGS 73 NYY + Y + + G+ A +LGL VDK F L + R P D D Sbjct: 3 NYYIEHSYYRTSNDSKQVYKGKLAMRLGLSNKEVDKLSFEALTKNRDPLTGDRLTFHDDK 62 Query: 74 NRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEALASTRVMTDGQSET 133 + H YD F +PK VS+++ L GD+R+ A AV+ A+++VE A RV G + + Sbjct: 63 SVH--AYDFNFHSPKGVSILSKLAGDERIGKAIMAAVNEAMKEVEKNAMCRVRKGGANYS 120 Query: 134 VLTGNLVMALFNHDTSRD----QEPQLHTHAVVANVTQHNGEWKTL-SSDKVGKTGFIEN 188 + L+ A SR +P H H +V NVT W + KV K I+N Sbjct: 121 RESRELLWAEMPDSHSRPVNGVPDPHEHCHCLVFNVT-----WDPIEKCQKVIKATQIKN 175 Query: 189 VYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVEA---FSGRSQTIREAV 245 N +Y +L +VE LGY E GK W++ G+P E FS R++ I + V Sbjct: 176 ---NAPLLQAIYLSRLATEVEKLGYRIEKDGKG--WDIAGIPSETKEKFSNRTKQIDDYV 230 Query: 246 GEDASLKSRDV--AALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAAD-QRADLR 302 + + + ++ A TRK K + + + W L ET + D Q+ +R Sbjct: 231 RDHGLVDACEMGAAGAKTRKGKNKLSQKEIQSNWDSRLTET--------EKNDLQKMKMR 282 Query: 303 TLTPGPASQ--DGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAG 360 + GP + D ++A++ ++ ER T ++LA + P + Sbjct: 283 AIMNGPIVRISDPSIAREALSHSVEKNFERNSVATQPNLLAEALLYKP--------GKVS 334 Query: 361 IDEAI----SREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRT 416 +DE S E D+ + + VL E D + +NR + E+ + Sbjct: 335 LDELTVLTGSSEFQTAKDKHGRKWVTTAAVLRE---EKSCIDYVYRNR--GNGERLGSKQ 389 Query: 417 AGYSD---------AVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIA 467 SD AV + R S+ + G G +G+ + E+ E G +V+ A Sbjct: 390 YRISDTRLSEEQRSAVHQILDSRDSVTALLGPAG-SGKTTLIQEVQKGLNEAGHKVRFFA 448 Query: 468 ADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAAR 527 R+ +K+D + I + E G + VD+ LS + L A Sbjct: 449 PSGRAVDVLKEDA-FKADTIQSLLKADEISDEMRGKVIWVDEAGLLSFPQMSKLFSMAES 507 Query: 528 HNVQVLIT-DSGQRTGT--GSAL-MAMKDAGVN-----TYRWQGGEQRPATI--ISEPDR 576 +++++ D Q T G AL + +K G+N R Q E I +S P+R Sbjct: 508 AGCRIVMSGDQAQHTAVERGDALRVLLKHGGLNGPSISQIRRQKKEPLRDAISSLSNPER 567 Query: 577 NV------------------------RYARLAGDFAASVKAGEESVAQVSGVR-EQAILT 611 + R A +A ++ S + EES VS E +T Sbjct: 568 DFESVVNGFKKLEKEGCIHELQDEESRLANIADEYFES-RQNEESCLVVSPTHIEGKKVT 626 Query: 612 QAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVI 671 A+R++L+ +G L P + L+ + +D+ + + + Y G+V++ R+ Sbjct: 627 NAVRAKLQAEGKLQGPSKSFETLTDLSMDTADKRIAENYEAGLVVK--------FHRHCP 678 Query: 672 DRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERL 718 + + A L + + E + + + LD+ L E+ V D E + Sbjct: 679 NNLRAGQDYLVTKTTKDEVVIRKPNGLDAVLPLHLAERFGVFDRETI 725 Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 120/526 (22%), Positives = 218/526 (41%), Gaps = 89/526 (16%) Query: 968 KLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTH 1027 +L+ QR+A IL++ D T + G AG GKTT + V +N +V P+ Sbjct: 396 RLSEEQRSAVHQILDSRDSVTALLGPAGSGKTTLIQEVQKGLNEAGH----KVRFFAPSG 451 Query: 1028 RAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALI 1087 RAV ++ A T+ S L ++ + + + +DE+ ++ M++ +++ Sbjct: 452 RAVDVLKEDAFKADTIQSLLKADEI------SDEMRGKVIWVDEAGLLSFPQMSKLFSMA 505 Query: 1088 AAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPE-LREAVYSLIN- 1145 + G R V SGD Q A+ G R+ + + +I RQ E LR+A+ SL N Sbjct: 506 ESAGCRIVMSGDQAQHTAVERGDALRVLLKHGGLNGPSISQIRRQKKEPLRDAISSLSNP 565 Query: 1146 -RDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDV 1204 RD E ++G + ++ +EG H + + +E++LA Sbjct: 566 ERDFESVVNGFKKLE------KEGCI---HELQD----EESRLAN--------------- 597 Query: 1205 PMTLYEAIVRDYTGRTPEAREQTLIV--THLNEDRRVLNSMIHDVREKAGELGKEQVMVP 1262 + D + + E L+V TH+ E ++V N+ VR K GK Q Sbjct: 598 --------IADEYFESRQNEESCLVVSPTHI-EGKKVTNA----VRAKLQAEGKLQGPSK 644 Query: 1263 VLNTANIRDGELRRLSTWETHRDALVLVDNVYHR-------------IAGISKDDGLITL 1309 T + E + LV+ +HR + +KD+ + + Sbjct: 645 SFETLTDLSMDTADKRIAENYEAGLVV---KFHRHCPNNLRAGQDYLVTKTTKDE--VVI 699 Query: 1310 QDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFT---KSDRERGYVANSVWTVTA 1366 + G ++ A GV + +TI + D+++ T KS R + S++TV Sbjct: 700 RKPNGLDAVLPLHLAERFGV--FDRETIDLRKRDKVQLTAKYKSRSGRTHSNKSIFTVAG 757 Query: 1367 VS-GDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKL 1425 + + L++G + P +Q + Y T+H +QG ET + Sbjct: 758 FTRKGEIKLNNGTI---LDPEFKQ----LTHGYVTTSHSSQG--ETVDRVIVAQSSASHN 808 Query: 1426 MAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFE 1471 A E YV+ SR ++++ VYTD+ + D + + + +A ++ E Sbjct: 809 AASSEQFYVSCSRARENISVYTDDSEALLDNVLESCHRPSATELLE 854 >UniRef50_C0A2R1 Conjugative relaxase domain protein n=2 Tax=Opitutaceae bacterium TAV2 RepID=C0A2R1_9BACT Length = 914 Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 188/785 (23%), Positives = 317/785 (40%), Gaps = 104/785 (13%) Query: 33 WAGRGAEQLGLQGSVDKDVFTRLLEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSM 92 W G+GA L L G + F L GR P + D +R R G+ S PK VS+ Sbjct: 41 WVGQGAALLSLAGPCRVNDFETLCSGRHPATGESLLASDKGSRRRVGFFGQISPPKDVSI 100 Query: 93 MAMLGGDKRLIDAHNQAVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQ 152 ++GGD R+ +AV ++++EA+ +TRV +GQ+ TGN+V A+ H+ +R Sbjct: 101 ACLVGGDSRIAVWWTEAVRETLQEIEAVTATRVRCEGQNHDRTTGNMVAAVVTHEANRAL 160 Query: 153 EPQLHTHAVVANVTQHNGE--WKTLSSDKVGK-TGFIENVYANQIAFGRLYREKLKEQVE 209 +PQLHTH + N+T+ + E WK++ + GF V N++A ++ Sbjct: 161 DPQLHTHVCIMNLTRDHEENRWKSVQPSAFYRHQGFFREVCYNRLAV----------RLR 210 Query: 210 ALGYETEVVGKHGMWEMPGVPV---EAFSGRSQTIREAVGEDASLKSRD---VAALDTRK 263 + GYE E V G + + G P E FS R I EA + + S+D + TR Sbjct: 211 SAGYELERVRGIG-FTIKGFPEKLRETFSKRRLAILEAAAA-SGITSQDGLQAVTVRTRA 268 Query: 264 SKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQA 323 K A W+ +RA AD TP PA + P A+ A Sbjct: 269 DKVSATAVELQAGWIAQAGPALDLVRAVIAQADG-------TPKPAPEVRP--FDALVSA 319 Query: 324 IAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKG---LF 380 + ER+ +L R I+ + + RA I E ++ +LI +KG Sbjct: 320 EEHVFERR-SVVDERLLLREALIIGRGHVTPDDLRAAIGERVASGELI----KKGGDLAS 374 Query: 381 TSGIHVLDELSVRALSR--DIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSG 438 SG+ DE A + D E S+ + + AVS + R + + G Sbjct: 375 RSGLEAEDEFVTWAEAHREDCGVIGYAVGLREASLGKD--QAAAVSTVLASRSRVTVFQG 432 Query: 439 QGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLL---E 495 G + + R GR + + + K+ + L +QLL E Sbjct: 433 DAGTGKTHSLKTVVAAIERRGGRIFGCAPSTGATDVLRKELTPDANTL----QQLLANPE 488 Query: 496 GMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGT---GSALMAMKD 552 A G +IVD+ +S+++ L A ++ ++L+ ++ G+ G AL ++ Sbjct: 489 LQAAMRGRVIIVDEAGLMSVRQMRDLCRLADANDYRLLLVGDTKQHGSVEAGDALRCLQK 548 Query: 553 ------AGVNTYRWQGGEQRPATIISEPDRNV-----RYARL----------------AG 585 A + R Q + + D NV R+ +L A Sbjct: 549 FANVPVARLTQIRRQKDPEFREAVADLADGNVVSAVARFRKLEAVKEIPYDRQLYSAAAK 608 Query: 586 DFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPE-VTMTALSPVWLDSRSR 644 D+ ++V++G+ + E T +R +L+ G+L P+ V A S W R Sbjct: 609 DYISTVRSGKTCLVISPVWSEIHAFTTEVRRQLRCNGLLSGPDRVVTVAWSLDWTREWRR 668 Query: 645 YLRDMYRPGMVME-----------QWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVV 693 + + Y+PG ++ ++ +R DR ++ VT + T D + Sbjct: 669 QIEN-YKPGDLLRFHRDEGDFGSGEYATVSRIEDRCLV--VTRHDGNRTWIDPR------ 719 Query: 694 RISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRA 753 + D + ++ VA G+ L V + GDR++VA ++ V+ GR Sbjct: 720 QTGGFDVQVA----GELSVAAGDSLLVEANEKSAGLKNGDRVEVAGFDDEGSIVLKDGRL 775 Query: 754 EPATL 758 P++ Sbjct: 776 IPSSF 780 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 134/564 (23%), Positives = 212/564 (37%), Gaps = 95/564 (16%) Query: 903 ELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVP 962 +L I ++ G+L + KG G L SR+ EAE + +E + V Sbjct: 351 DLRAAIGERVASGEL----IKKG---GDLASRSGLEAEDEFVTWAEAHREDCGVIGYAV- 402 Query: 963 GELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVG 1022 G L Q AA +L + R TV QG AG GKT + V++A+ E R+ G Sbjct: 403 GLREASLGKDQAAAVSTVLASRSRVTVFQGDAGTGKTHSLKTVVAAI----ERRGGRIFG 458 Query: 1023 LGPTHRAVGEMRSAGV-DAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMA 1081 P+ A +R DA TL L + +LQ + ++DE+ ++ M Sbjct: 459 CAPSTGATDVLRKELTPDANTLQQLLANPELQ------AAMRGRVIIVDEAGLMSVRQMR 512 Query: 1082 RAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQT-PELREAV 1140 L A R + GDT Q ++ G R Q + VA + +I RQ PE REAV Sbjct: 513 DLCRLADANDYRLLLVGDTKQHGSVEAGDALRCLQKFANVPVARLTQIRRQKDPEFREAV 572 Query: 1141 YSLINRDVERALS---GLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLK 1197 L + +V A++ LE+VK RQ Sbjct: 573 ADLADGNVVSAVARFRKLEAVKEIPYDRQ------------------------------- 601 Query: 1198 GEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKE 1257 LY A +DY T + + L+++ + + + + G L Sbjct: 602 ----------LYSAAAKDYIS-TVRSGKTCLVISPVWSEIHAFTTEVRRQLRCNGLLSGP 650 Query: 1258 QVMVPVL-----------NTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGL 1306 +V V N + G+L R HRD Y ++ I +D Sbjct: 651 DRVVTVAWSLDWTREWRRQIENYKPGDLLRF-----HRDEGDFGSGEYATVSRI--EDRC 703 Query: 1307 ITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTA 1366 + + +GN I PR+ G + + V GD + +++ G V Sbjct: 704 LVVTRHDGNRTWIDPRQ--TGGFDVQVAGELSVAAGDSLLVEANEKSAGLKNGDRVEVAG 761 Query: 1367 VSGD-SVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKL 1425 + S+ L DG+ + P + H YA T+HG+QG + I + E Sbjct: 762 FDDEGSIVLKDGR----LIPSSFRQFTH---GYASTSHGSQGKTVNRGILVMADES--IA 812 Query: 1426 MAGFESAYVALSRMKQHVQVYTDN 1449 A + AYV+ SR ++ +YT + Sbjct: 813 TANLKQAYVSNSRFQETQMIYTTD 836 >UniRef50_A9I2Z2 Conjugal transfer protein n=1 Tax=Bordetella petrii DSM 12804 RepID=A9I2Z2_BORPD Length = 908 Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 142/557 (25%), Positives = 231/557 (41%), Gaps = 73/557 (13%) Query: 933 SRASYEAEKSILRHILEGKEAVMPLMERVPGE--LMEKLTSGQRAATRMILETSDRFTVV 990 +R S+EAE IL G+ A + E L LT GQR A +I SD+ T + Sbjct: 376 TRKSFEAESRILAAEQAGRGAWHATISDASAESNLDTHLTPGQREAVMLIATDSDQITGI 435 Query: 991 QGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVDAQTLASFLHDT 1050 QG AG GK+ + M+ + + + L P V +R G+ A T+AS L Sbjct: 436 QGLAGTGKSF----ALQNTQMILQRQGHTMAALAPYGNMVRNLREDGIPANTIASVL--- 488 Query: 1051 QLQQRSGETPDFS----NTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAI 1106 S + P T+ ++DE+ +V M + ALI G + V GDT Q +AI Sbjct: 489 ---SASDKRPFIDTLGPKTIVVIDEAGVVPVRQMDKLLALIQPTGAKVVLLGDTAQTKAI 545 Query: 1107 APGQPFRLQQTRSAADVAIMKEIVRQTPE-LREAVYSLINRDVERALSGLESVKPSQVPR 1165 G+ F + Q S +M +I RQ E LR+AV ++L L+ V +P Sbjct: 546 EAGRAFAMLQ-ESGMKTVLMADIQRQRSERLRQAVQLAAEGQASQSLPLLDQVLT--IPD 602 Query: 1166 QEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEARE 1225 Q S E H A YEAI + YT + + Sbjct: 603 Q-------FSTDEHGHKNRDSSAR-------------------YEAIAQAYTRLSAADQA 636 Query: 1226 QTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRD 1285 T++VT N R +N H + G+ + Q++ T + R ++ + T D Sbjct: 637 GTIVVTGTNASRLAINERTHALLGLEGKGHRCQLL-----TRHDTTRAERSVARYYTVGD 691 Query: 1286 ALV--------LVDNVYHRIAGISKDDGLI--TLQDAEGNTRLISPREAVAEGVTLYTPD 1335 +V L +R+ G ++ D L ++Q + T+ + +++Y Sbjct: 692 IVVPERDYQCGLKRGEMYRVTGSTRHDRLTVESIQSDQSPTQAMEIIPKTMSKLSVYHLS 751 Query: 1336 TIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREI---RPGQEQAEQ 1392 + GDR+R T++D V + V A+ SVT+ + ++ RP Sbjct: 752 RAELSVGDRVRITRNDAHNDLVNGQLAKVAAIDASSVTIETNGRHVQLPTDRP------L 805 Query: 1393 HIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQG 1452 ++D AYA T H AQG T + E + + ++ YV++SR + V+TD+ + Sbjct: 806 NMDYAYATTVHSAQGL--TCDRVIYNAESFSRTTSQ-DTYYVSISRERHEAIVFTDDAKK 862 Query: 1453 WTDAINNAVQKGTAHDV 1469 + ++ KG A D+ Sbjct: 863 LPERVDRLTYKGLARDL 879 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 90/303 (29%), Positives = 146/303 (48%), Gaps = 25/303 (8%) Query: 55 LLEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAV 114 +L+G G R + R DLTF APKS+++ A++GGD+RLI A+++AV A+ Sbjct: 1 MLQGDFGRGVAAGRSIRKDAKARAALDLTFGAPKSITLQALIGGDERLIHANDKAVASAL 60 Query: 115 RQVEA-LASTRVMTDGQSETVLTGNLVMALFNHDTSRDQE-----PQLHTHAVVANVTQH 168 VE L R +G+S TGNL++A F H+T+R E P LH HA++ N+TQ Sbjct: 61 VYVEQHLTMGRRKVNGKSRVEHTGNLIIAKFRHETARPTEGAAPDPHLHIHALLMNLTQR 120 Query: 169 -NGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKH-GMWEM 226 +G W LS++++ K + + +Y+ +L+ V ALGY H + + Sbjct: 121 VDGSWVALSNEEIFKLLRVTD---------SIYQAELERNVRALGYAVRHEKSHIELAHI 171 Query: 227 PGVPVEAFSGRSQTIREAVGEDASLKSRDVAALD---TRKSKQHVDPEIKMAEWMQTLKE 283 +E FS RS I + + + AL T ++Q E+ + + ++ Sbjct: 172 SREQIEFFSKRSTGIAAELSARGTSREEAPHALRQGITLANRQQKTQELSRTDLHRQWRD 231 Query: 284 TGFDIRAYRDAADQRADLRTLTPGPASQDGPDV--QQAVTQAIAGLSERKVQFTYTDVLA 341 IR D A Q+AD++ P + D+ Q ++ AI L+ER+ D+L Sbjct: 232 AAAGIRMQFDHAWQQADIQ---PTKELEHRSDLVAQASLNWAIQHLAERESVMPLADLLQ 288 Query: 342 RTV 344 V Sbjct: 289 NAV 291 >UniRef50_D2U0N4 Conjugal transfer nickase/helicase TraI (Fragment) n=1 Tax=Arsenophonus nasoniae RepID=D2U0N4_9ENTR Length = 184 Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 68/193 (35%), Positives = 101/193 (52%), Gaps = 10/193 (5%) Query: 204 LKEQVEALGYETEVVGKHGMWEMPGVPVEAFSGRSQTIREAVGEDASLKSRDVAALDTRK 263 +KE++ GY+ G++G E+ GVP + FS R + I AVGE A+ K + VA LDTR+ Sbjct: 1 MKEELTGQGYQFVAAGQNGQSEIKGVPTDIFSSRRKEIIAAVGEKATAKQKMVATLDTRQ 60 Query: 264 SKQHVDPEIKMAEWMQTLKETGFDIRA-YRDAADQRADLRTLTPGPASQDGPDVQQAVTQ 322 K + E EW Q L+ TGFD A + ++ D Q +QQAV Sbjct: 61 KKDFSNIETVRQEWKQKLQATGFDKNAIIKPVIHEKID---------RQQHITLQQAVKN 111 Query: 323 AIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTS 382 AI L +FTY +L + + +P E+G+I R RA I + + + LIP++RE FT+ Sbjct: 112 AIQSLEIHHHRFTYDKLLTQVINQIPYESGMINRLRAEIGKFLDKGDLIPVNREGTAFTT 171 Query: 383 GIHVLDELSVRAL 395 + E +V L Sbjct: 172 AHQLKAENAVAQL 184 >UniRef50_UPI00016C4B0F TrwC protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4B0F Length = 882 Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 80/239 (33%), Positives = 111/239 (46%), Gaps = 24/239 (10%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGS-MGERWAGRGAEQLGLQGSVDKDVFTRLLEGR 59 M+ I Q A +A YY D YYV G+ + W GRGA LGL G V ++ F L + Sbjct: 1 MLRIVQQSHANAAKGYYAQSD-YYVDGAELPGAWGGRGAALLGLSGEVQREDFHALCDNH 59 Query: 60 LPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEA 119 P + S R YD +F PK+VS++ LGGD+R++D AV + ++E Sbjct: 60 DPRSGRQLTARTKSERTVL-YDWSFDVPKAVSLLYELGGDERILDVFRGAVQDTMNEIEP 118 Query: 120 LASTRVMTDGQSETVLTGNLVMALFNHDTSRDQ------EPQLHTHAVVANVT--QHNGE 171 TRV G +E TGN+ A+F H TSR +PQLH H V N T + G Sbjct: 119 ETQTRVRKGGAAEDRTTGNMAWAMFVHRTSRPSKEDLKPDPQLHAHVTVFNATWDRDEGR 178 Query: 172 WK-TLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGV 229 WK T D + + + ++A G + LGY E GK W + G+ Sbjct: 179 WKATQHRDLKRDAPYWQEAFHARLAAG----------LGDLGYGIERRGKD--WSIAGI 225 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 65/233 (27%), Positives = 112/233 (48%), Gaps = 16/233 (6%) Query: 927 GTGLLVSRASYEAEKSILRHILEGKEAVMPLM--ERVPGELMEKLTSGQRAATRMILETS 984 G + SRA E+ +L +G+ +P+ R+ + L++ Q+ A R +L +S Sbjct: 365 GQRVTTSRAVLAEEQKLLSFARDGRGTCVPIAANHRLR---RDWLSAEQQGAVRHVLGSS 421 Query: 985 DRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGE-MRSAGVDAQTL 1043 DR + +G AG GKTT + AV + + P V L PT A + +R ++ T+ Sbjct: 422 DRVVLARGVAGAGKTT---LIQEAVEEIRAAGLPVAV-LAPTALAARDVLREHFAESDTV 477 Query: 1044 ASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQL 1103 A+FL D + Q R + +DE+ ++G D+A+ + + R V GDT Q Sbjct: 478 AAFLTDEKAQAR------MRGGVIWVDEAGLLGVHDLAQVFEVAREQDARVVLMGDTRQH 531 Query: 1104 QAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLE 1156 +++A G L ++ + VA +K+I RQ ++AV L E + L+ Sbjct: 532 RSVARGPALSLLESHAGLPVAEVKDIRRQKAAYKQAVEHLAAGRTEDGFAALD 584 >UniRef50_C6DZ94 Conjugative relaxase domain protein n=1 Tax=Geobacter sp. M21 RepID=C6DZ94_GEOSM Length = 1351 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 89/299 (29%), Positives = 139/299 (46%), Gaps = 37/299 (12%) Query: 9 SAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRLPDGAD--- 65 +A AG Y+ +D YY+ G RW G+ +L L G V ++ F L G+ PDGA Sbjct: 10 TASQAGKYFAAED-YYLKGGESSRWLGKTTAELKLAGKVGEEEFRNLCAGKTPDGAAQLV 68 Query: 66 ----LSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEALA 121 + + + HR G DLTFSAPKS+S + G+ L + +QAV+ +R VE Sbjct: 69 APKVVRKEGEPQELHRAGNDLTFSAPKSLS-IGYAAGNHELKEIWDQAVENTMRYVEEHY 127 Query: 122 STRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDKVG 181 S G GNL+ A F+H TSR +P +H+H + N+ H + + L+++ Sbjct: 128 SQYRTPHGIRN---AGNLLAAKFDHVTSRALDPDVHSHVFLLNMV-HTPDGRWLANEP-- 181 Query: 182 KTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHG-MWEMPGVP---VEAFSGR 237 +++Y ++I+ G L R++ + GY+ + ++E+ GV +E FS R Sbjct: 182 -----KSIYQDKISIGMLARQESICLLRQAGYQVYFTDREKFLFEIEGVSPEEIEFFSKR 236 Query: 238 SQTIREAVGE-----------DASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETG 285 I E V E + LK AA TR K + + +W Q E G Sbjct: 237 GAAIEEQVAEWQQEGKYPGVSETLLKQ--WAAFGTRDHKLKITIQEIRQKWDQWFVEVG 293 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 139/511 (27%), Positives = 198/511 (38%), Gaps = 116/511 (22%) Query: 969 LTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRA-VMSAVN---MLPESERPRVVGLG 1024 LT GQR L FTV QG G GKT F A V+ N + P + L Sbjct: 477 LTPGQREYVLNELAGDKGFTVTQGDPGTGKT--FAAGVVERFNDEVLQPSGRAHHTLNLA 534 Query: 1025 PTHRAVGEMRSA-GVDAQTLASFLHDTQLQQRSGETPDFS-------------NTLFLLD 1070 T +A EM A G +A T+ SFL+ R ++PD S LD Sbjct: 535 YTGKAALEMEQASGKEAFTVDSFLN------RYRKSPDLSAFPGMERPAPRGAQVALKLD 588 Query: 1071 ESSMVGN---TDMARAYALIAAGGGRAVAS--GDTDQLQAIAPGQPFRLQQTRSA----A 1121 E+S VG + R + + G + S GDT QLQ+I PF + A Sbjct: 589 EASFVGGRQAEHLLRVVQDLKSKGVQVKLSMIGDTKQLQSIQ-ASPFFSHASELARQELG 647 Query: 1122 DVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSH 1181 D A+MKEI RQ V +N + E+ L G + ++ Q+G V E Sbjct: 648 DFALMKEITRQKDAGLLDVAESLNLEGEQRLLGKNATDALKLLEQQG------RVREIPT 701 Query: 1182 SQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLN 1241 L +A + ++ A P RD ++ LIVT LN DR+ LN Sbjct: 702 YD--ALMQAAVECYVEEAAKPS----------RDPAAAAAGEKQSVLIVTPLNADRQELN 749 Query: 1242 SMIHDVREKAGELGKE---QVMVP----------------VLNTANIRDGELRRLSTWET 1282 + I + + GELG+ QV VP V +DG + Sbjct: 750 AKIRATKMEKGELGQGVAVQVYVPVEQGVTASSYHPGMNIVFTGKRAKDGAMEVPEGVAL 809 Query: 1283 HRDALVL-VDNVYHRIAGISKDD-GLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVG 1340 ++ VL VD V +R+A + + D G T + E + +A LY + Sbjct: 810 NQQGEVLSVDPVRNRVAVVFQGDRGGTTTKTFEAS--------GLANKSALYRVEEREFA 861 Query: 1341 TGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAE--------- 1391 GD + K+ +R TV+A SG ++ L +G+ R + E AE Sbjct: 862 AGDIVVCNKTTFDRS-------TVSARSGKTIKLRNGE--RGVIEAMEAAEKGSVALIRF 912 Query: 1392 ---------------QHIDLAYAITAHGAQG 1407 QHI+ YA+TAH A+G Sbjct: 913 PGDRVVKVNLDRFGPQHIEHGYAVTAHKAEG 943 >UniRef50_A8ZLG3 Putative uncharacterized protein n=3 Tax=Acaryochloris marina MBIC11017 RepID=A8ZLG3_ACAM1 Length = 1317 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 99/361 (27%), Positives = 164/361 (45%), Gaps = 55/361 (15%) Query: 1 MMSIAQVRSAGSAG-NYYTDKDNYYV----LGSMGE-RWAGRGAEQLGLQGSVDKDVFTR 54 M++I + S G YYT +++YY + SM + W G + ++FT Sbjct: 1 MLNITTINSNIKDGAKYYTKEESYYSQNKEIQSMTQTEWFG----SMAPDEHYSAELFTE 56 Query: 55 LLEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLG--GDKRLIDAHNQAVDF 112 + G LP+G + G + R YDLTFS P M++ G GDKRL +AH + + Sbjct: 57 MFYGNLPNGGRMRNEVKGKGQERLAYDLTFSVPGKSLSMSIHGPNGDKRLWNAHVETIKE 116 Query: 113 AVRQVEA-LASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH-NG 170 + VE A+ R+ + + V T ++ AL +H +R +P +HTH V+ N T +G Sbjct: 117 VLAIVEERYAAARIQANNDRQVVKTSSIAAALVHHHETRAGDPHVHTHVVLFNGTLCPDG 176 Query: 171 EWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP 230 E++ + + + ++G + G LY +K+ +V+ LGYE K G +++ G Sbjct: 177 EYRAMYIEPLIRSGIL----------GDLYDQKMALKVQELGYEIRET-KTG-FDLAGAT 224 Query: 231 ---VEAFSGRSQTIREAVGEDA---SLKSRDVAALDTRKSKQHVDP-EIKMAEWMQTLKE 283 ++ FS RS I + + E + K+R A +TR K + E K W + + Sbjct: 225 DEQIKKFSKRSTEIEDYLKEKGWSNTPKNRQKATFETRIGKDITESLEQKQERWGEEMAS 284 Query: 284 TGFDIRAYRDAADQRADLRTLTPG-----PASQDGPDVQQAVTQAIAGLSERKVQFTYTD 338 GF LTP P SQ+ P ++ + AI L+E + F D Sbjct: 285 VGF---------------HGLTPSDQPIKPESQETP--RELLDAAIEHLTEHQSSFNAED 327 Query: 339 V 339 + Sbjct: 328 I 328 Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 144/566 (25%), Positives = 232/566 (40%), Gaps = 95/566 (16%) Query: 929 GLLVSRASYEAEKSILRHILEGKEAVMPLMERVP-GELMEKLTSGQRAATRMILETSDRF 987 G L ++ + + ++ IL +L V PL + M L SGQ A + +L SD++ Sbjct: 360 GRLTTQTAVDRDQRILDIVLFKDSKVEPLNPTADFSDTM--LNSGQAEAMKRLLSFSDQY 417 Query: 988 TVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA-GVDAQTLASF 1046 +++G AG GKTT A+ A LP +V PTH A ++ A G+ T+ASF Sbjct: 418 QILKGLAGTGKTT---ALGLAREQLPPDVDIKV--FAPTHNAKHQISEAFGLKGATIASF 472 Query: 1047 LHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAI 1106 + P+ +N L++ DE+ M G+ DM + G R GDT Q +I Sbjct: 473 V--------VSPPPEGANQLWIFDEAGMFGSADMEKILQKAEQVGARCWFVGDTGQNASI 524 Query: 1107 APGQPFRLQQTRSAADVAIMKEIVR-QTPELREAVYSLINRDVERALSGLESVKPSQVPR 1165 + G P R+ R V + +I+R Q E AV + + AL LE Sbjct: 525 SAGAPVRMLMNRGVT-VHRLDQIIRQQNKEQLRAVELIADGHGVEALRALEK-------- 575 Query: 1166 QEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEARE 1225 ++ E S E KL A V Y + R+ Sbjct: 576 -------NGNIREVEDS-ETKLTSA----------------------VAYYMEKPKHRRD 605 Query: 1226 QTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTW----- 1280 +TL+V N +R ++ K G+L K L N+ + +R + Sbjct: 606 KTLVVVGTNAERFGFTKLLRAELIKEGQLTKNTEFTQ-LQRRNLSKAQKKRAENYNKGDL 664 Query: 1281 ----ETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDT 1336 + HR L +V +++ + + + +Q G I+P E E YT Sbjct: 665 LVLHKKHRLYTQLQTHVPYKVLAV--EGKKLKVQSLGGRNFTINPAE--HELTQAYTTRR 720 Query: 1337 IRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDG----QQTREIRPGQEQAEQ 1392 ++ GD++RFT ++ ++ N+ T T + T+ D +P Q Sbjct: 721 NQIAVGDKLRFTSTNMKKDIHNNAFLTCTDIKDQIATVKDKHGRVHHLDLTKPLQ----- 775 Query: 1393 HIDLAYAITAHGAQGA--SETFAIALEGTEGNRKLMAGFESAYVALSRMK-QHVQVYTDN 1449 ID +A T + +QG+ SET IA R ES YV +SR K +++ V+T++ Sbjct: 776 -IDHDWATTTYRSQGSTNSETLYIASLNPTSAR------ESFYVGISRNKTKYLTVFTED 828 Query: 1450 ---RQGWTDAINNAVQKGTAHDVFEP 1472 Q W A +NA Q+ +F+P Sbjct: 829 LSKLQEWV-AQSNA-QENALEILFDP 852 >UniRef50_D1N4L7 Conjugative relaxase domain protein n=2 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N4L7_9BACT Length = 295 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 89/270 (32%), Positives = 138/270 (51%), Gaps = 41/270 (15%) Query: 1 MMSIAQVRSAGSAG-----NYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSV----DKDV 51 M ++ ++R+ +G N+ + D Y + W G A+ GL+ V + + Sbjct: 1 MFNMTKIRATNGSGKSFYANHLSSNDYYSEHEKVQGYWRGELADTFGLRDKVVTSEEFSL 60 Query: 52 FTRLLEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVD 111 F R + + P M G +D +APKSVS+M+M D+RL++AH ++V Sbjct: 61 FQRNVNPKTPGKLTQKNMPGGPR----FFDFQVAAPKSVSVMSMF--DERLVEAHRESVR 114 Query: 112 FAVRQVEALASTRVMTDGQS------ETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANV 165 A+ ++E LA+ RV DG++ ET TG LV A F HDTSR +PQLHTH VV NV Sbjct: 115 IAMAELERLAAVRV-RDGENVRTNNYET--TGKLVYAEFMHDTSRALDPQLHTHNVVCNV 171 Query: 166 TQH-NGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYET-EVVGKHG- 222 T+ +G +K L + +E A + A G++Y ++ + LGYET E + G Sbjct: 172 TRAGDGRYKALET--------LEMCRAIRYA-GKVYHNEMAARCRELGYETVETRDRKGN 222 Query: 223 -MW-EMPGVP---VEAFSGRSQTIREAVGE 247 +W ++ VP +E FS R + I +A E Sbjct: 223 VIWYDLACVPADVMERFSKRRRQIEKAEAE 252 >UniRef50_A3ZVN0 Putative uncharacterized protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZVN0_9PLAN Length = 967 Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 216/901 (23%), Positives = 344/901 (38%), Gaps = 173/901 (19%) Query: 1 MMSIAQVRSAGSAGNYYTD---KDNYYVLGSMGERWAGRGAEQLGL-QGS-VDKDVFTRL 55 M+ Q +S Y+ + +YY+ + W GRGAE LGL GS V K+ F L Sbjct: 1 MLIATQGKSVSGTQQYFDQVLTRGDYYLGQEVAGHWHGRGAEVLGLGAGSQVKKEEFNAL 60 Query: 56 LEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVR 115 LEG+ P ++ +R RPG DLTFS PKSVS+ + D+R+++ AV +R Sbjct: 61 LEGKHPTTGKRLTQRNRKDR-RPGMDLTFSVPKSVSLAWAINEDERILEMLQAAVQETMR 119 Query: 116 Q-VEALASTRVMTDGQSETV---LTGNLVMALFNHDTSRDQE----PQLHTHAVVANVTQ 167 + VE L RV T + T TG L+ A F H TSR E P LH HA V N T+ Sbjct: 120 RDVEPLMQRRVRTGRHAFTQQKEATGKLIYADFLHKTSRPVEGAADPHLHIHAFVVNWTE 179 Query: 168 HNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVE-ALGYETEVV-----GKH 221 +G+ G E + + + + +L +++ LGYE E V GK Sbjct: 180 QDGK---------HFAGEFEEIVRQRPSLQAKFEARLARKMQHELGYEVEHVHYAQGGKL 230 Query: 222 GM-WEMPGV---PVEAFSGRSQTIREAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEW 277 WE+ GV +E FS R+ + + E A + + K+ + Sbjct: 231 KWGWELRGVERATIEKFSRRTTQVEQYAEEHAI---------------HDAERKGKLGKL 275 Query: 278 MQTLKETGFDIRAYRD------AADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERK 331 + K+TG I R ++RA L DG Q A ++ E Sbjct: 276 TREKKDTGQSIDQLRSQWRARLTPEERAAFAGLLQTTERADGKSEQAAARNSVQYALEHH 335 Query: 332 VQFTYTDVLARTVGILPPENGVI---ERARAGIDEAISREQLIPLDREKGLFTSGIHVLD 388 + T + VG E+G+ E A ID ++ + D K F + VL+ Sbjct: 336 LYRQSTVERHQVVGA-ALEHGLTLSPEAVEAEIDRMDLIQRTLDADGTKRQFITTKEVLN 394 Query: 389 -ELSVRALSRDIMKQNRVTVHPEKSVPR---TAGYSDAVSVLAQDRPSLAIVSGQGGAAG 444 E + A +RD + E R DAV + + R ++ V+G G G Sbjct: 395 AEREMIAYARDGRGTRKSISSTEHEFQREWLNEQQRDAVCFVLESRDAVLAVAG-GAGTG 453 Query: 445 QRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGST 504 + + E V ++ G+EV A TG R++LE F T Sbjct: 454 KSSLMEEAVDAIQQNGKEVFTFAPS------------------TGAREVLEEKGFRKAQT 495 Query: 505 V------------------IVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGT--- 543 V +D+ L ++ + A N +V+++ ++ + Sbjct: 496 VEHLLRNSKLHPELKDQVIWIDEAGLLDVRSMNGVFRIAKEQNARVVLSGDTRQHASPRR 555 Query: 544 GSALMAM-KDAGVNT------YRWQGGEQRPATIISEPDRNV------------------ 578 G A+ + ++AG+N R QG ++ +IS V Sbjct: 556 GEAMRLLEQEAGLNVARVEAIQRQQGRYRQAVEMISRGQEVVDARTGKTGLLAGFDLLDA 615 Query: 579 -----------RYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLP 627 RY LA ++ S G+ ++ RE A +T IR LK G L Sbjct: 616 MGKIKEVATADRYQLLADNYLKSEANGKSTLVVAPTHREAAAVTSEIRDRLKQDGKLATE 675 Query: 628 EVTMTALSPVWLDSRSRYLRDMYRPGM-VMEQWNPETRS----HDRYVIDRVTAQSHSLT 682 E + L + Y ++ Q++ + +RY RVT ++ Sbjct: 676 ERAFVQYRSLNLSEAEKGDAKTYSEQTDLVVQFHQNVKGGFQRGERY---RVTGLNN--- 729 Query: 683 LRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQ--VASV 740 GE Q+V +S + +K+P A +R V + LRV+ GD+L+ + Sbjct: 730 -----GEVQLVPLSGGEM-------KKLPQAASDRFEVYAERE-LRVAAGDKLRFSLGGT 776 Query: 741 SEDAMTVVVPGRAEPATLPVSDSPFTA---LKLENGWVETPGHSVSDSATVFASVTQMAM 797 +++ + GR + F A + L+NGW ++ D V S Sbjct: 777 TKNGKGRISNGRLDEV------KGFDASGNIVLKNGWTIDSSYAHLDLGYVVTSHASQGK 830 Query: 798 D 798 D Sbjct: 831 D 831 Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 123/563 (21%), Positives = 223/563 (39%), Gaps = 75/563 (13%) Query: 908 INAQIKRGDLLYVDV-AKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELM 966 + A+I R DL+ + A G + ++ AE+ ++ + +G+ + Sbjct: 363 VEAEIDRMDLIQRTLDADGTKRQFITTKEVLNAEREMIAYARDGRGTRKSISSTEHEFQR 422 Query: 967 EKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPT 1026 E L QR A +LE+ D V G AG GK++ + A+ + V P+ Sbjct: 423 EWLNEQQRDAVCFVLESRDAVLAVAGGAGTGKSSLMEEAVDAI----QQNGKEVFTFAPS 478 Query: 1027 HRAVGEMRSAGV-DAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYA 1085 A + G AQT+ L +++L P+ + + +DE+ ++ M + Sbjct: 479 TGAREVLEEKGFRKAQTVEHLLRNSKLH------PELKDQVIWIDEAGLLDVRSMNGVFR 532 Query: 1086 LIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLIN 1145 + R V SGDT Q + G+ RL + + +VA ++ I RQ R+AV +I+ Sbjct: 533 IAKEQNARVVLSGDTRQHASPRRGEAMRLLEQEAGLNVARVEAIQRQQGRYRQAV-EMIS 591 Query: 1146 RDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVP 1205 R QE A + +L G D Sbjct: 592 R-----------------------------------GQEVVDARTGKTGLLAGFDLLDAM 616 Query: 1206 MTLYEA-------IVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQ 1258 + E ++ D ++ + TL+V + + + S I D ++ G+L E+ Sbjct: 617 GKIKEVATADRYQLLADNYLKSEANGKSTLVVAPTHREAAAVTSEIRDRLKQDGKLATEE 676 Query: 1259 VMVPVLNTANIRDGELRRLSTWETHRDALV-LVDNVY--------HRIAGISKDDGLITL 1309 + N+ + E T+ D +V NV +R+ G+ ++G + L Sbjct: 677 RAFVQYRSLNLSEAEKGDAKTYSEQTDLVVQFHQNVKGGFQRGERYRVTGL--NNGEVQL 734 Query: 1310 QDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSG 1369 G P +A ++ +Y +RV GD++RF+ G N ++ Sbjct: 735 VPLSGGEMKKLP-QAASDRFEVYAERELRVAAGDKLRFSLG----GTTKNGKGRISNGRL 789 Query: 1370 DSVTLSDGQQTREIRPGQ--EQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMA 1427 D V D ++ G + + H+DL Y +T+H +QG AIA G+E + A Sbjct: 790 DEVKGFDASGNIVLKNGWTIDSSYAHLDLGYVVTSHASQGKDRHVAIAAMGSESLPAINA 849 Query: 1428 GFESAYVALSRMKQHVQVYTDNR 1450 + YV +SR ++ V +Y D++ Sbjct: 850 --KQFYVTVSRGREDVAIYVDDK 870 >UniRef50_B9MIL4 Conjugative relaxase domain protein n=1 Tax=Diaphorobacter sp. TPSY RepID=B9MIL4_DIAST Length = 1093 Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 91/321 (28%), Positives = 143/321 (44%), Gaps = 44/321 (13%) Query: 1 MMSIAQVRSAGSAGN---YYTDKDNYYVLGSM----------GERWAGRGAEQLGLQGS- 46 M+S+ ++S G YY Y LG+ +W G +E+LG + S Sbjct: 1 MLSMKSIKSGGGVSKVAAYYEG----YQLGAEDPNAKQHDEPNGKWIGAFSERLGFKDSI 56 Query: 47 VDKDVFTRLLEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGG---DKRLI 103 V + L+G P + G RH+PGYDLTFSAPKSVS+ + + Sbjct: 57 VHRGEIESALKGYDPKTGNPFSNNAGDERHKPGYDLTFSAPKSVSVAWASASPELQREIS 116 Query: 104 DAHNQAVDFAVRQVEALASTRVMTDGQSETVLTGN--LVMALFNHDTSRDQEPQLHTHAV 161 AH +A++ A+ E + +G + + + + A F H ++R EP LHTH V Sbjct: 117 AAHQRAIESAIEYAEQTGGAFIQREGHAGAIKVPHHEIAAATFEHSSNRAGEPHLHTHCV 176 Query: 162 VANVTQHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKH 221 V N++++ GK + YA+ I G YR + ++E LG++ E GK Sbjct: 177 VMNISEN------------GKRVDFDTRYAHTI--GTAYRAEFAHELEKLGFQIEKDGK- 221 Query: 222 GMWEMPGVPVE---AFSGRSQTI--REAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAE 276 + + G P E S R+ I R+A S K+R++ L TR+ K E Sbjct: 222 -SFRLDGFPKELEQQLSTRAAQIAERQAQTGMKSDKAREMHQLATREMKGERPRETAFNA 280 Query: 277 WMQTLKETGFDIRAYRDAADQ 297 + E GF++ + RD + Q Sbjct: 281 AREAAAENGFNVESLRDQSHQ 301 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 70/226 (30%), Positives = 104/226 (46%), Gaps = 25/226 (11%) Query: 964 ELMEK--LTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVV 1021 +L++K L++ Q A R I ++ + F VV+G AG GK+ A A E+ RVV Sbjct: 406 DLIQKKGLSNDQAQAMRHITDSRNSFAVVEGTAGAGKSYMLGAAREAW----EASGSRVV 461 Query: 1022 GLGPTHRAV-GEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDM 1080 G +A G +G+ + T+ H T + GE T+ ++DE+ M G+ M Sbjct: 462 GCALAGKAASGLEEGSGIKSDTI----HGTLQRIERGELQLDKQTVVVVDEAGMAGSRLM 517 Query: 1081 ARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPEL-REA 1139 +R G + V GDT QLQ + G R +T +A A M EI RQ E R+ Sbjct: 518 SRLCDQAQQAGAKVVLVGDTRQLQPVDAGGAMRSMKT-AAGQAAEMTEIRRQHHEADRQM 576 Query: 1140 VYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEA 1185 V L N + +AL + QE + EH+ E H +EA Sbjct: 577 VTDLKNGEAGKALQTM----------QERGYLREHATPE--HMREA 610 >UniRef50_D2QCL6 Conjugative relaxase domain protein n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QCL6_9SPHI Length = 919 Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 122/531 (22%), Positives = 222/531 (41%), Gaps = 98/531 (18%) Query: 950 GKEAVMPLMERVPGELMEKLTSGQRA-ATRMILETSDRFTVVQGYAGVGKTTQFRAVMSA 1008 G+ + PL ++ P ++ GQ+A A + +L T+ R ++++G AG GKTT R + Sbjct: 393 GQGKLKPLYQKAPDLTLD----GQQADAVKHVLTTTHRVSIIRGAAGSGKTTLMREALDH 448 Query: 1009 VNMLPESERPRVVGLGPTHRAV-GEMRSAGV-DAQTLASFLHDTQLQQRSGETPDFSNTL 1066 + ++ V + PT A G +R G +A+T+A L D +Q + N + Sbjct: 449 MKQAGKT----VTVVAPTSEASRGVLRDEGFAEAETVAKLLSDKSMQDQ------LDNQI 498 Query: 1067 FLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIM 1126 +DE+ ++G DM AL R + GDT Q ++ G R+ T A + Sbjct: 499 LWVDEAGLLGTQDMTALLALAQEKNARLILGGDTKQHASVVRGDALRILNTVGGIQTAEV 558 Query: 1127 KEIVRQ-TPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEA 1185 +I RQ + R AV L N +++ L+S+ Q Sbjct: 559 SKIYRQRNADYRTAVEYLANGAIKQGFEKLDSINAIQTSD-------------------- 598 Query: 1186 KLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIV-THLNEDRRVLNSMI 1244 P+ ++ +V+DY + + ++ TH N D + +I Sbjct: 599 -------------------PLKPHDTLVKDYMATIKKGKSALVVSPTHQNSD--AVTEVI 637 Query: 1245 HDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGI---- 1300 + + G LGK+ ++P L + N+ + E + W + ++ N + GI Sbjct: 638 REKMKATGMLGKKDYLLPRLTSLNLTEAE---KADWRNLKTGQLIQFN--QNLPGIKRGS 692 Query: 1301 ------SKDDGLITLQDAEGNTRLISPREAV-AEGVTLYTPDTIRVGTGDRMRFTKS--D 1351 S D G+ +Q+ E + I P + + +Y I + GD +R T++ D Sbjct: 693 RWIIENSSDKGVF-IQNEE---KQILPLPTLKSRDFDVYNRSDINLAKGDTIRITRNGFD 748 Query: 1352 RERGYVAN-SVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGAS- 1409 +E+ + N + V ++S + L +T + + H+ AY IT+H AQG + Sbjct: 749 QEKNRLNNGQLLDVLSISKNG-ELHVRNRTSKADYKLDSQYGHLTHAYCITSHAAQGKTV 807 Query: 1410 -ETF----AIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTD 1455 E F A T+ + YV++SR + ++YTD+++ D Sbjct: 808 DEVFITQPASTFPATDA--------KQFYVSVSRGRDRARIYTDDKEQLLD 850 Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 88/301 (29%), Positives = 139/301 (46%), Gaps = 29/301 (9%) Query: 4 IAQVRSAGSAGNYYTD---KDNYYVLGS-MGERWAGRGAEQLGLQGSVDKDVFTRLLEGR 59 + Q SA A +Y++ K +YY+ + G+ AE+LGL G V+KDVF L + Sbjct: 1 MIQSHSASGAKSYFSQALAKADYYLNDQELQGVMHGKLAERLGLTGPVNKDVFFDLCDNV 60 Query: 60 LPDGADLSRMQDGSNRHRP-GYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVE 118 P A M +N HR GYD+ F PK +S++ L D +++A ++V ++ +E Sbjct: 61 NP--ATGKSMTPRTNEHRTVGYDINFHCPKELSILHALSNDLHILEAFQKSVSETMQDIE 118 Query: 119 ALASTRVMTDGQSETVLTGNLVMALFNHDTSRD-----QEPQLHTHAVVANVTQHNGEWK 173 A TRV D TG L+ + F H T+R +P LH H V N T W Sbjct: 119 RDAKTRVRKDKSVAERDTGELLYSTFIHQTARPVAGHLPDPHLHAHCFVFNAT-----WD 173 Query: 174 TLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP--- 230 + ++ K ++ + + + ++L + + GY+ K + + GVP Sbjct: 174 --AEEQQIKAVQFRDINRDMPYYQARFHKRLSDNLIEQGYQIRRTDK--AFSVDGVPQRV 229 Query: 231 VEAFSGRSQTIREAVGEDASLKSRDVAALD--TRKSKQ--HVDPEIKMAEWMQTLKETGF 286 V+ FS R+ I E ++ AL TR KQ H E+K AEW + ++E G Sbjct: 230 VDLFSKRTNEIGRIAKEKGITDIDELGALGARTRSKKQVGHTMAELK-AEWRKQIQEFGP 288 Query: 287 D 287 D Sbjct: 289 D 289 >UniRef50_A4JFK5 ATP-dependent exoDNAse (Exonuclease V) alpha subunit-helicase superfamily I member-like protein n=1 Tax=Burkholderia vietnamiensis G4 RepID=A4JFK5_BURVG Length = 1749 Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 81/258 (31%), Positives = 128/258 (49%), Gaps = 35/258 (13%) Query: 32 RWAGRGAEQLGLQGSVDKDVFTRLLE-------GRLPDGADLSRMQDGSNRHRPGYDLTF 84 +W G+ A++LGLQ D ++ E G P+ G++ H G+D+TF Sbjct: 119 QWHGKVAQRLGLQDPTDSASLEKMFEQVDQLAKGFAPNTGGEGVHGAGAD-HMIGWDVTF 177 Query: 85 SAPKSVSMMAMLGGD---KRLIDAHNQAVDFAVRQVEA-LASTRVMTDGQSETVLTGNLV 140 S K S+M + GGD K + D H++AV + +E + TR G+ ++ + G + Sbjct: 178 SMIKPPSIMMVNGGDAIKKEIYDIHHEAVTLVMEFIEKHVIMTRFGQGGKIKSKVEG-IA 236 Query: 141 MALFNHDTSRDQEPQLHTHAVVANVT---QHNGE--WKTLSSDKVGKTGFIENVYANQIA 195 A+F+H SRD +PQLHTH V+ N +GE W+T+ + + +YA ++A Sbjct: 237 AAMFSHRASRDWDPQLHTHVVLFNAVSAINPDGEHVWRTIDA---------KTLYAMKMA 287 Query: 196 FGRLYREKLKEQVEALGYETEVVG-KHGMWEMPGVPVEAF---SGRSQTIREAVGE---- 247 G LYR + ++ LG+ E G K + + G P EA S R+ I + + E Sbjct: 288 TGALYRSHVAKRFAELGFIIERTGKKQDTFTLAGFPTEAVEQASKRAAAIDKLLDEKGLT 347 Query: 248 DASLKSRDVAALDTRKSK 265 DA K + +A L TRK K Sbjct: 348 DAHAKQKSLAKLATRKPK 365 >UniRef50_C7CNC3 Putative uncharacterized protein n=1 Tax=Methylobacterium extorquens DM4 RepID=C7CNC3_METED Length = 1117 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 151/566 (26%), Positives = 246/566 (43%), Gaps = 70/566 (12%) Query: 16 YYTDKDN------YYVLGSMGERWAGRGAEQLGLQ---GSVDKDVFTRLLEGRLPDGAD- 65 YYTD ++ GS E GR + L G VD V L GR P+ + Sbjct: 84 YYTDNGAGEANGVWWTRGSGSEVGPGRFGDPFRLCPDGGDVDGRVLRDLAAGRDPESLEP 143 Query: 66 LSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDK---RLIDAHNQAVDFAVRQVEA--L 120 L R R GYDL F+APKSVS++A G + R++ AH++AV A+ A L Sbjct: 144 LVRASANGGRS-VGYDLQFAAPKSVSVLAAFAGPEERARILAAHDRAVHRALDYAHAAGL 202 Query: 121 ASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDKV 180 TR G+ G + A++ H TSR Q+PQLH+HAV+ N+ + +D Sbjct: 203 IVTRTGAQGRHHAPAAG-VSAAVYRHFTSRAQDPQLHSHAVLLNL--------CVRAD-- 251 Query: 181 GKTGFIEN--VYANQIAFGRLYREKLKEQVEA-LGYETEVVGKHGMWEMPGV--PV-EAF 234 G TG ++N + N LYR +L + + LGYE G++ +E+ GV PV E F Sbjct: 252 GSTGGLDNRAILKNAGGIAALYRSELASGLRSGLGYEAVRAGRN--FEIAGVAEPVLELF 309 Query: 235 SGRSQTIREAVGEDASLKSRD-----VAALDTRKSKQHVDPEIKM-AEWMQTLKETGFDI 288 S R I E S+D AA DTR K P + AEW + L + G+ Sbjct: 310 SKRRAAIERVARERGFETSKDRAAAQAAAFDTRARKNREMPLAALEAEWERQLVQAGWAR 369 Query: 289 RAYRDAADQRAD-LRTLTPGPASQDGPDVQQA-VTQAIAG---LSERKVQFTYTDVLART 343 A + AD +R GPA++ + +A +T A+A + ER + + L Sbjct: 370 GAVFEGVRIAADGIREARVGPAAERRQRLAEAGLTGALAMQAVVEERDLVRRVAEALQCE 429 Query: 344 VGI---------LPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRA 394 G L + GV+ R EA+ + ++ E+G+ DE RA Sbjct: 430 AGADAVLDEVERLCRDGGVVAVGRTAEGEAVYATPEM-IEAERGMLRRAYGRQDE---RA 485 Query: 395 LSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVM 454 + + + + P + A A+ +R ++++ G G +G+ +A + Sbjct: 486 FVPEAVVRRVLLERPSLRAEQRAAVRHAL-----NRDGVSVIEGSAG-SGKSYAMASVAE 539 Query: 455 MAREQGREVQIIAADRRSQMNMKQDERLSGEL---ITGRRQLLEGMAFT--PGSTVIVDQ 509 R G EV +IA ++ ++ D + + +TG ++ T P +TVI D+ Sbjct: 540 AVRACGGEVWVIAPSWKAVDVIRTDTATAEAMARAVTGFLGRIDKGEITLGPETTVIADE 599 Query: 510 GEKLSLKETLTLLDGAARHNVQVLIT 535 + ++ L++ +++++ Sbjct: 600 AGMIGTRDLAALVEATGAAGAKLVLS 625 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 97/328 (29%), Positives = 145/328 (44%), Gaps = 54/328 (16%) Query: 938 EAEKSILRHIL--EGKEAVMP--LMERVPGELMEK--LTSGQRAATRMILETSDRFTVVQ 991 EAE+ +LR + + A +P ++ RV L+E+ L + QRAA R L D +V++ Sbjct: 468 EAERGMLRRAYGRQDERAFVPEAVVRRV---LLERPSLRAEQRAAVRHAL-NRDGVSVIE 523 Query: 992 GYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVDAQTLASFLHDTQ 1051 G AG GK+ +V AV V + P+ +AV +R+ A+ +A + Sbjct: 524 GSAGSGKSYAMASVAEAVRACGGE----VWVIAPSWKAVDVIRTDTATAEAMARAVTGFL 579 Query: 1052 LQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQP 1111 + GE T + DE+ M+G D+A A G + V SGDT QL + G P Sbjct: 580 GRIDKGEITLGPETTVIADEAGMIGTRDLAALVEATGAAGAKLVLSGDTRQLAPVVAGAP 639 Query: 1112 FRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWA 1171 RL A A M EI RQ R S EGAW Sbjct: 640 MRLLV--RALGAARMDEIQRQ-----------------RGRS-----------ESEGAWM 669 Query: 1172 PEHSVTEFSHSQEAKLAEAQQK--AMLKGEAFPDVPMTLYEAIVRDY--TGRTPEAREQT 1227 S+ +F+ + A+ EA + A+ G D T+ +A+V Y + R PE E+T Sbjct: 670 RAASI-DFAAGRTARALEAYDRGGAITWGG---DREATI-QALVDAYAVSRRDPEGAERT 724 Query: 1228 -LIVTHLNEDRRVLNSMIHDVREKAGEL 1254 ++T N+D R LN+ I D ++ G L Sbjct: 725 RAVLTGWNKDVRALNARIRDRLKQDGLL 752 >UniRef50_Q3SI89 Putative ATP-dependent exoDNAse (Exonuclease V) alpha subunit n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SI89_THIDA Length = 907 Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 95/318 (29%), Positives = 151/318 (47%), Gaps = 35/318 (11%) Query: 1 MMSIAQVRSAGSAGNYYTDKDN---------YYV-LGSMGERWAGRGAEQLGLQGSVDKD 50 M+S++ + + A Y ++N YY G +G RW G+ A+++ L G + Sbjct: 1 MLSVSVIGAGSEAAGYAAYQENEVAAAQREDYYAGEGDVG-RWVGKAAQEMSLAGELKPG 59 Query: 51 VFTRLLEGRLPD-GADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQA 109 L+G P+ G LS+ + +H+ G+DLTFSAPKSVS + + + + Sbjct: 60 QLLAGLQGFHPETGEALSK--NAGEKHKGGWDLTFSAPKSVSCVWAVADPETRGAIEDAQ 117 Query: 110 VDFAVRQVEALASTRVMTD-GQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH 168 A R ++ L + T ++E + A++ H TSR+ +PQLHTH V NV Q Sbjct: 118 NAAAARALQFLEESGAFTSRSRNEPGPVEGVAAAMYQHGTSREADPQLHTHVAVLNV-QP 176 Query: 169 NGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGK-HGMWEMP 227 +G + D K +A G +YR +L +++ LG E GK + ++P Sbjct: 177 DG--TAMDFDTRWK-----------MAAGAVYRAELAAEMQKLGLRVEADGKSFRVVDVP 223 Query: 228 GVPVEAFSGRSQTIREAVGEDA--SLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETG 285 + FS R I EA+ S K+ +VAAL TRK K+ + A+W E G Sbjct: 224 AAVEKEFSTRRGQIEEALAAKGLKSAKAAEVAALSTRKGKEPTTRDELFADWKTRAAEHG 283 Query: 286 F---DIRAYRDAADQRAD 300 F I+A R+A Q+A+ Sbjct: 284 FSLESIQALRNAPRQQAE 301 Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 58/192 (30%), Positives = 92/192 (47%), Gaps = 13/192 (6%) Query: 969 LTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHR 1028 +T Q+AA + + E +++G AG GK+ +M A E+ V G + Sbjct: 414 MTDEQKAALKHVCEDPGAVKIIEGMAGTGKSY----LMDAARESWEAAGFEVEGAALAGK 469 Query: 1029 AVGEMRS-AGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALI 1087 A + S A ++++T+ S L Q SG+ S ++ ++DE MVG+ +AR + Sbjct: 470 AASGLESGADINSKTIHSLL----FQLDSGQRQLHSKSILVIDEGGMVGSRQLARVLDHV 525 Query: 1088 AAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRD 1147 G +AV GD+ QLQ I G FRL R + A ++ IVRQ E+ V L Sbjct: 526 HKAGAKAVMVGDSWQLQPIDAGGAFRLLSERLGS--ARLENIVRQKHEVDRRVVRLFADG 583 Query: 1148 VERALSGLESVK 1159 +A LES++ Sbjct: 584 --KAAEALESMR 593 >UniRef50_C7PJH8 Conjugative relaxase domain protein n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PJH8_CHIPD Length = 870 Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 177/828 (21%), Positives = 327/828 (39%), Gaps = 116/828 (14%) Query: 1 MMSIAQVRSAGSAGNYYTD---KDNYYVLGS-MGERWAGRGAEQLGLQGSVDKDVFTRLL 56 M+ + Q RSA A +Y+ D K +YY+ + + GR A+++G+ G DK +F L Sbjct: 1 MLRMTQSRSAEQAKDYHNDALLKSDYYLNDQELRGSFNGRLAKRIGINGPTDKFIFDALC 60 Query: 57 EGRLPDGADLSRMQDGSNRHRP-GYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVR 115 E P L + ++ R GYDLTF PKSVS++ + ++ AV +R Sbjct: 61 ENINP--ITLKPLTSRKSKVRTVGYDLTFCCPKSVSLLHAFAKNDSILTVFRNAVHRTMR 118 Query: 116 QVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRD-----QEPQLHTHAVVANVTQHNG 170 +E TRV G+ E +T L+ A F H TSR +P LH H N T Sbjct: 119 DIEKDVQTRVRKKGKDENRITSELLYADFVHQTSRAVNREMPDPFLHCHCYTFNATYDPI 178 Query: 171 EWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP 230 E K K + + + L+ ++L + + LGY ++ +E+ GV Sbjct: 179 E-------KQFKAVQFRDTMRDLPYYEALFHKRLADGLMKLGY--KIRPTKSSFEVVGVD 229 Query: 231 ---VEAFSGRSQTIREAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFD 287 + FS R+ I + E ++++ + R + K+ G Sbjct: 230 PKLIRLFSKRTNEIEQIAKEKNITDAKELDKIGARSRAK---------------KQKGLS 274 Query: 288 IRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGIL 347 + R D ++TL + VQ++ + A+ ++ + + R ++ Sbjct: 275 MDDLR--TDWERQIKTLNLPSVNTSIVSVQESTSNALT--ADECIDHSLLHHFERN-SVV 329 Query: 348 PPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTV 407 + + + GID E+ + + + F ++++ V+ +R + + V Sbjct: 330 QDRKILAKAYKFGID-----EKNVSITQINTAFKKHPNIIN---VKQDNRVLCTLDSVLR 381 Query: 408 HPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAA-------------------GQRER 448 + V D + L P+L++ QG AA G+ Sbjct: 382 EETRMVKLAHDGKDTFAPLYISAPTLSLKGEQGRAARHVLTTKDKVSIIMGGAGTGKTIL 441 Query: 449 VAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLL---EGMAFTPGSTV 505 + E V M + G++V ++A ++ ++ + E + + LL E + + Sbjct: 442 MQETVSMIEKTGKKVIVVAPTAKASRDVLKKEGFADAQTVAK--LLASPELQKYLQDQIL 499 Query: 506 IVDQGEKLSLKETLTLLDGAARHNVQVLIT-DSGQRTGT--GSALMAMKDAGV------N 556 VD+ L K+ LL+ A N +V+++ D Q G +L + DAG+ Sbjct: 500 WVDESGLLGTKDMTALLELATTFNTRVILSGDVRQHAAVAYGDSLRILMDAGIVPVTVNK 559 Query: 557 TYRWQGGEQRPATI-------------------ISEPDRNVRYARLAGDFAASVKAGEES 597 +R + R A I D N YA L D+ ++ G ++ Sbjct: 560 IHRQRKQPYRDAVYDLSKGHVMAAFGKMERMGAIKTCDEN--YASLTNDYMTAIGQG-KT 616 Query: 598 VAQVSGVREQA-ILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVM 656 V VS Q +T+AIR L+ G L E T L + L + + G ++ Sbjct: 617 VLVVSPTHAQGETVTKAIRQTLRHAGKLHGKEKPFTRLVNLNLTEAEKADSRYFDSGQIL 676 Query: 657 EQWNPETR--SHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVAD 714 Q+N + +H + + + L ++D +G+ ++ L + ++R EK+ + Sbjct: 677 -QFNQNCKGITHGT-TLSIMQVEGKCLVMKDEKGKNVTASLNDL-KGFEVYRKEKIDLLK 733 Query: 715 GERLRVTGKIPGLR---VSGGDRLQVASVSEDAMTVVVPGRAEPATLP 759 G+ + VT + ++ G L+V S ++ + P TLP Sbjct: 734 GDVITVTRNGVDKKKQSLNNGQVLEVVSTAKGDIIARHPDTKALYTLP 781 Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 61/211 (28%), Positives = 93/211 (44%), Gaps = 17/211 (8%) Query: 949 EGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSA 1008 +GK+ PL P L Q A R +L T D+ +++ G AG GKT + +S Sbjct: 392 DGKDTFAPLYISAP---TLSLKGEQGRAARHVLTTKDKVSIIMGGAGTGKTILMQETVSM 448 Query: 1009 VNMLPESERPRVVGLGPTHRAVGEM--RSAGVDAQTLASFLHDTQLQQRSGETPDFSNTL 1066 + E +V+ + PT +A ++ + DAQT+A L +LQ+ + + Sbjct: 449 I----EKTGKKVIVVAPTAKASRDVLKKEGFADAQTVAKLLASPELQKY------LQDQI 498 Query: 1067 FLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIM 1126 +DES ++G DM L R + SGD Q A+A G R+ V + Sbjct: 499 LWVDESGLLGTKDMTALLELATTFNTRVILSGDVRQHAAVAYGDSLRILMDAGIVPVTVN 558 Query: 1127 KEIVRQTPE-LREAVYSLINRDVERALSGLE 1156 K I RQ + R+AVY L V A +E Sbjct: 559 K-IHRQRKQPYRDAVYDLSKGHVMAAFGKME 588 Score = 43.5 bits (101), Expect = 0.085, Method: Compositional matrix adjust. Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 13/154 (8%) Query: 1327 EGVTLYTPDTIRVGTGDRMRFTKS--DRERGYVANS--VWTVTAVSGDSVTLSDGQQTRE 1382 +G +Y + I + GD + T++ D+++ + N + V+ GD + + Sbjct: 719 KGFEVYRKEKIDLLKGDVITVTRNGVDKKKQSLNNGQVLEVVSTAKGDIIARHPDTKALY 778 Query: 1383 IRPGQEQAEQHIDLAYAITAHGAQGAS--ETFAIALEGTEGNRKLMAGFESAYVALSRMK 1440 P Q H+ AY +T+H +QG + E F T A + YV+ SR + Sbjct: 779 TLP---QQFGHLAYAYCVTSHASQGMTVDEVFISQPASTFA----AASMQQFYVSASRGR 831 Query: 1441 QHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKP 1474 + VYTDN++ D I+ + ++ +A ++ + P Sbjct: 832 DCLHVYTDNKEALLDRISQSGERMSALELIKSFP 865 >UniRef50_C5A9A9 Putative ATP-dependent exoDNAse (Exonuclease V) alpha subunit n=1 Tax=Burkholderia glumae BGR1 RepID=C5A9A9_BURGB Length = 1131 Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 70/221 (31%), Positives = 113/221 (51%), Gaps = 26/221 (11%) Query: 15 NYYTDKD-NYYVLGSMGE-----RWAGRGAEQLGLQGSVDKDVFTRLLEGRLPDGADLSR 68 NY+ K+ YYV G+ W G+GAE LGL+G V ++V LL G+LPDGA Sbjct: 21 NYFLAKEARYYVNEVTGKIENQTTWMGKGAEALGLKGEVSEEVLLNLLNGKLPDGA--KG 78 Query: 69 MQD-GSNRHRPGYDLTFSAPKSVSMMAMLGGD-----KRLIDAHNQAVDFAVRQVEALAS 122 +Q+ G R +D+ +A K+VSM+ + + +I AH +A ++ VE+ Sbjct: 79 VQNVGRGGRRAAFDMCATAEKTVSMLMADPTNTPEEREAIIQAHKRAARMMIKFVESELY 138 Query: 123 TRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDKVGK 182 RV G +E V ++ A H ++RD +P LH+H +V N+ ++ D + Sbjct: 139 ARVGAQG-NEIVRNVGMIAAEVTHYSNRDLDPNLHSHYIVMNMVH------SIGPDGKER 191 Query: 183 TGFIEN--VYANQIAFGRLYREKLKEQVEALGYETEVVGKH 221 EN + A + A G +YR +L +++ LG++ V KH Sbjct: 192 VTTFENSTLMAIKHAAGAIYRNQLAHEIQELGFQ---VNKH 229 Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 57/206 (27%), Positives = 101/206 (49%), Gaps = 13/206 (6%) Query: 931 LVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVV 990 ++ +A+ A++ +R E +A + ++ L KL + Q + R I + ++ Sbjct: 427 IIKKAAARADEQSIRLTKEQVDAGLAKFQQKNPHL--KLNAEQEGSVRYICSDTGGCAII 484 Query: 991 QGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRS-AGVDAQTLASFLHD 1049 G AG GKTT F A + E +++G+ + +A +++S +GV++ + + LH Sbjct: 485 SGRAGTGKTTSF----IATKITWEEAGGKLIGVSESWKAAKKLQSESGVESYSTRTTLHR 540 Query: 1050 TQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPG 1109 ++G+ P S T+ ++DE+ M + +A L G + V GD QLQ + G Sbjct: 541 I----KNGKLPLDSKTMLIIDEAGMQTSQSIAEMQDLCDKAGAKLVLMGDHLQLQPVGAG 596 Query: 1110 QPFRLQQTRSAADVAIMKEIVRQTPE 1135 FR+ Q R D A +KEI RQ E Sbjct: 597 SGFRIMQAR-IKDHA-LKEIRRQREE 620 >UniRef50_A3ZP08 Putative uncharacterized protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZP08_9PLAN Length = 697 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 135/571 (23%), Positives = 248/571 (43%), Gaps = 82/571 (14%) Query: 930 LLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTV 989 + +R E I+ EG+ PL + + GQ+AA R +L + DR + Sbjct: 168 MATTREMLALESKIVSFAREGRGRCRPLGDPKRPLTRDWFNEGQQAAVRHVLGSRDRVMM 227 Query: 990 VQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM--RSAGV-DAQTLASF 1046 ++G AG GKTT + + A L E+ +P VV L + +A E+ + AG +A T+A F Sbjct: 228 IRGVAGTGKTTLEQEIGEA---LAETGKP-VVALAQSVKASREVLRQEAGFAEADTVARF 283 Query: 1047 LHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAI 1106 L D ++Q + N + L+DE+S +G DM + + + R + GD Q +++ Sbjct: 284 LKDAEMQASA------KNGVILVDEASQLGTRDMHAVFTVAESVNARVLLVGDRRQHKSV 337 Query: 1107 APGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQ 1166 G+P +L + R+ VA + EI+RQ + ++ L V A L+ + Sbjct: 338 TAGEPLKLLEERAGLPVAEVTEILRQQGDYKKVAEHLSEGRVGPAFDELDKL-------- 389 Query: 1167 EGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQ 1226 W V + QE LA A A+ + +D G+ R+ Sbjct: 390 --GWI--RQVADDQRYQE--LASAYLAAINE----------------QDRHGK----RKT 423 Query: 1227 TLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDA 1286 L+V+ + + + I +G L +E+ + + +A++ D + + + +E Sbjct: 424 ALVVSPTHAEASRVTDAIRKSLHASGLLQEERTVTTYV-SAHLTDAQKQDATEYE----- 477 Query: 1287 LVLVDNV-YHRIA-GISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDR 1344 L D + +H+ A G +K L+ + P +A+ +Y + + GDR Sbjct: 478 --LGDLIQFHQNAPGFTKGTRLVVDE--------TPPPTDLADRFEVYRAKPLALAVGDR 527 Query: 1345 MRFT---KSDRERGYVAN-SVWTVTAVS--GDSVTLSDGQQTREIRPGQEQAEQHIDLAY 1398 +R T K+ + ++N +++TV + GD +D + H+ Y Sbjct: 528 IRITAGGKTKDGKHRLSNGALFTVEGFTAHGDLCVNNDWIIDHDF--------GHLAHGY 579 Query: 1399 AITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAIN 1458 T+H +QGA+ +E + +AYVA++R K+ ++TD+ A Sbjct: 580 VTTSHASQGATVNKVFVAIDSESMK--ATDQRTAYVAVTRGKEQAVIFTDDHLDLLKAAA 637 Query: 1459 NAVQKGTAHDVFEPKPDREVMNAERLFSTAR 1489 A + +A ++ EPKP+ + AE +F+ R Sbjct: 638 RADKSLSAMELAEPKPETKPTPAE-VFANRR 667 >UniRef50_B1MAE8 TraA/ATP-dependent exoDNAse/relaxase n=9 Tax=Mycobacterium RepID=B1MAE8_MYCA9 Length = 1110 Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 135/485 (27%), Positives = 211/485 (43%), Gaps = 51/485 (10%) Query: 11 GSAGNYYTDKDNYY-VLGSMG-ERWAGRGAEQLGLQG-SVDKDVFTRLLE-GRLPDGADL 66 G G YY++ + V S G + A RG G G + D D TR L+ G P GA Sbjct: 34 GGLGEYYSESETRLPVWFSAGRDTTAARGLTGAGRAGENADLDAVTRWLDDGESPCGASG 93 Query: 67 SRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGD---KRLIDAHNQAVDFAVRQV-EALAS 122 Q + H GYDLTF APKSVS+M LG D K + DAH A+ A+ + E Sbjct: 94 RAFQKRAGVH--GYDLTFCAPKSVSLMRGLGNDVTVKAVADAHAFAITEAMEYLAEHGGY 151 Query: 123 TRVMT--DGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDKV 180 TRV G+ + V +V A F H+TSR +P LHTH +V N Q + + +S D Sbjct: 152 TRVHNPRTGEKDLVRLPGIVAAGFQHETSRAGDPHLHTHVLVPN-RQARADGRLVSLDGT 210 Query: 181 GKTGFIENVYANQIAFGRLYREKL-KEQVEALGYETEVVGKH-GMWEMPGV---PVEAFS 235 ++Y A G +Y+ L +E ++G E V H GM ++ G + ++S Sbjct: 211 -------SLYHEAKAAGIIYQATLRRELTRSIGVEWNDVDPHTGMADIAGADRGDLRSWS 263 Query: 236 GRSQTIREAVGEDASLKSRDVAALDTRKSKQHVDP-EIKMAEWMQTLKETGFDIRAYRDA 294 RS +RE ++ +++A +++ P + + W D R +R Sbjct: 264 TRSTQLREWASGHLRVECDELSAAQLATAQKATRPRKPEGVAWASLRVAWADDTRTFR-- 321 Query: 295 ADQRADLRTLTPGPASQDGPDVQQAVTQAIA-GLSERKVQFTYTDVLARTVGILPPENG- 352 D+ ++ G D + V +A++ GL RK FT D++ +P ++ Sbjct: 322 VDE--TVQQAARDARRAAGVDYAEVVRRAVSHGL--RKAAFTRADLIEAIGARMPVDDAD 377 Query: 353 ------VIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVT 406 VIER G+ I E+ +T+ V +E RA+ + +++ Sbjct: 378 GPSPREVIERLADGVALRIGDERAAHQREGSIRYTAADLVAEE---RAIIEVMGRRHSAA 434 Query: 407 VHPEKSVPRTAGYSD----AVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGRE 462 V P TAG S AV+ +A + +S G AG+ + L A + G+ Sbjct: 435 VLPSVD---TAGLSPDQARAVTAIATSERLVQPLSAPAG-AGKTHSLRALRAAAHDAGKR 490 Query: 463 VQIIA 467 V + A Sbjct: 491 VLVAA 495 >UniRef50_Q7CW18 Conjugation protein n=8 Tax=Bacteria RepID=Q7CW18_AGRT5 Length = 1266 Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 130/484 (26%), Positives = 196/484 (40%), Gaps = 104/484 (21%) Query: 969 LTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHR 1028 L+ QR A + I S+R VV G+AG GK+T +++A E++ +V G + + Sbjct: 382 LSDEQRHAIKHIT-GSERIAVVVGFAGAGKST----MLTAARKAWEAQGYQVHGAALSGK 436 Query: 1029 AV-GEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALI 1087 A G S+G++++TLAS+ + G S+ LF++DE+ MVG+ +AR Sbjct: 437 AAEGLEESSGIESRTLASWSYSWD----QGRNLIGSSDLFVIDEAGMVGSRQLARFIGEA 492 Query: 1088 AAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRD 1147 G + V GD +QLQAI G PFR AI ++I Sbjct: 493 EERGAKIVLVGDHEQLQAIGAGAPFR----------AIAEQI------------------ 524 Query: 1148 VERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMT 1207 V+ S + RQ W + SV +H LA + + D M Sbjct: 525 --------GHVELSGIRRQRHDWQRQASVAFATHKTAEGLAAYRDHGDIHFAESRDAAMA 576 Query: 1208 LYEAIVRDYTGRTPEAREQTLI-VTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNT 1266 IVRDY + + T + + H D R LN+ I EL Q + L Sbjct: 577 ---QIVRDYIDDNEKRPDGTRVAMAHRRADVRALNATIR------SELQNRQRLERSLGL 627 Query: 1267 ANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVA 1326 ++ D R +V R G S D +T Q + G + A A Sbjct: 628 SDGPDRGDR---------------GDVEDR--GNSGDVAELTFQTSNG-------KRAFA 663 Query: 1327 EG-VTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTL-SDGQQTREIR 1384 G ++ + +G + M T D E+G + V + GDSV++ +D Q Sbjct: 664 SGDRIIFLENNRDLGVKNGMLGTVEDVEKGRI---VARLDGRGGDSVSIPTDSYQA---- 716 Query: 1385 PGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQ 1444 ID YA T H QGA+ A L + +R L AYVA++R + VQ Sbjct: 717 ---------IDHGYATTIHKNQGATVDRAFVLASSTMDRHL------AYVAMTRHRDSVQ 761 Query: 1445 VYTD 1448 +Y D Sbjct: 762 LYAD 765 >UniRef50_A4JHA8 Putative uncharacterized protein n=1 Tax=Burkholderia vietnamiensis G4 RepID=A4JHA8_BURVG Length = 541 Score = 84.7 bits (208), Expect = 3e-14, Method: Composition-based stats. Identities = 86/296 (29%), Positives = 140/296 (47%), Gaps = 41/296 (13%) Query: 15 NYYTD---KDNYYVLGSMGER-----WAGRGAEQLGLQGSVDKDVFTRLLEGRLPDGA-- 64 +YY + +D+YY G + W+G+GAE L L G V+K F R++ GR P + Sbjct: 13 DYYLNVRAQDDYYNKKDSGNKEGIGTWSGKGAEALNLVGIVEKTEFLRIMNGRNPHTSFS 72 Query: 65 -DLSR-MQDGSNRHRPGYDLTFSAPKSVSMMAMLGGD----KRLIDAHNQAVDFAVRQVE 118 LS+ ++D + RH G D TFSA KS +++ D KR +D + + +R E Sbjct: 73 DKLSKYVRDDTKRH--GQDFTFSANKSFTLLYNSVDDNSQLKRDLDKLWKEANIILRD-E 129 Query: 119 ALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQ----EPQLHTHAVVAN-VTQHNGEWK 173 + ++ +G+ V V+ + H+TSR++ +P H H V+A NG WK Sbjct: 130 LEKNVQIRENGK--LVPASGAVIGYWEHETSREEDGKIDPNKHNHNVIAQYAMDKNGNWK 187 Query: 174 TLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVEA 233 ++ N++ N+I + + + V LG+E V KH W + G EA Sbjct: 188 SVE---------FGNLFKNKILIDAKAQAHIAKGVRELGFEI-VEDKHS-WRIKGFNHEA 236 Query: 234 ---FSGRSQTIREAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGF 286 FSGR I + G++AS ++R A + + +K + EW L+ GF Sbjct: 237 LSHFSGRRNKILKEAGKNASYRARQNQA-NVKNAKSDYNLSDLKQEWKDRLESFGF 291 >UniRef50_B2FKA4 Putative conjugal transfer protein TraA n=1 Tax=Stenotrophomonas maltophilia K279a RepID=B2FKA4_STRMK Length = 926 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 94/358 (26%), Positives = 153/358 (42%), Gaps = 66/358 (18%) Query: 33 WAGRGAEQLGLQGS-VDKDVFTRLLEGRLPDGADLSR----------------------- 68 W G A +L L+G V ++V +L +G P G L + Sbjct: 33 WGGSLAAELCLEGQPVTREVMEKLGKGFSPTGRPLCKNAGKEARLVIKTDRWGNVRLDDD 92 Query: 69 ---MQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKR---LIDAHNQAVDFAVRQVEALAS 122 M+ HR G+DLT SAP VS+ L ++ +++AH QA A+R +E+ Sbjct: 93 GKPMEKWEGGHRVGFDLTISAPGDVSVAFALADEREKLAILEAHRQACAVAMRYIESKVE 152 Query: 123 TRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ-HNGEWKTLSSDKVG 181 R G+ + + T LV A +H ++R+ + LHTH +V V++ +G W T + Sbjct: 153 ARRGRAGK-DVIDTQGLVWAAADHTSNRNVQCDLHTHHLVFGVSKGEDGRWGTFDA---- 207 Query: 182 KTGFIENVYANQIAFGRLYREKLKEQVEALGY------ETEVVGKHG---MWEMPGVPVE 232 IE +Y ++ A LY+ +L ++ALGY E +V+G+ + + G+ E Sbjct: 208 ----IE-IYRHRHAADHLYKAELYSAMKALGYGIQREREVDVIGRETGQILTTIAGIDRE 262 Query: 233 AF---SGRSQTIREAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIR 289 R Q I + V E + S D A TRK K+ E + +W QT Sbjct: 263 LVLQTKTRRQEILDYVKEHPN-ASHDEACKATRKKKEEPPFEQVVKDWQQT--------- 312 Query: 290 AYRDAADQRADLRTLTPGPASQDGPDVQ-QAVTQAIAGLSERKVQFTYTDVLARTVGI 346 + + A +R DL T G + + + + E + F D L R +G+ Sbjct: 313 -FANIARERPDLVPTTQSLKQTQGQHLDPHTFDEVLQRMHENEAMFCEHD-LVRELGM 368 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 45/147 (30%), Positives = 68/147 (46%), Gaps = 9/147 (6%) Query: 969 LTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHR 1028 LT Q+AA + + V+ G AG GKTT V E+E +++GL + + Sbjct: 465 LTEEQKAAIGHLTHGTAGVGVMSGLAGTGKTT----VAEVYKQCFEAEGKQLMGLAVSGK 520 Query: 1029 AVGEMRS-AGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALI 1087 A ++ +G+ ++A F Q R G+ N + +LDE+ MV D + Sbjct: 521 AAAKLEEESGMLCMSVAKFFS----QLRQGKVALTKNVVVVLDEAGMVATDDTLKLMTYC 576 Query: 1088 AAGGGRAVASGDTDQLQAIAPGQPFRL 1114 G + V GD+DQLQ IA G F L Sbjct: 577 QGVGAKLVMQGDSDQLQPIAAGNGFEL 603 >UniRef50_D1BL70 TrwC relaxase n=1 Tax=Veillonella parvula DSM 2008 RepID=D1BL70_VEIPT Length = 861 Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 94/368 (25%), Positives = 157/368 (42%), Gaps = 62/368 (16%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGER-WAGRGAEQLGLQGSVDKDV-------F 52 M++ + V S AG YY +KD+YY E W G G L S+ D+ Sbjct: 1 MVTTSNV-STIQAGQYY-NKDDYYSRTITQEDFWFGNG-----LLSSIGDDIPNPYKSTI 53 Query: 53 TRLLEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKR--LIDAHNQAV 110 T L + + + + + + DLTFS PKS+S+ AML + L+DAHNQAV Sbjct: 54 TPLSQDNYEQKVNTLKDELTPDAKKLAIDLTFSPPKSISI-AMLNPALKYDLLDAHNQAV 112 Query: 111 DFAVRQVEA---LASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ 167 + VE+ + D ++E + T N + A H SR+Q+PQLHTH ++ T Sbjct: 113 KNVLTFVESNYVVWRKHTNKDNRTENIKTKNALFACLQHRVSREQDPQLHTHCLLFRKTM 172 Query: 168 HNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQV--------EALGYETEVVG 219 N + T+ D+ +++NQ F +Y +L + + E+L + Sbjct: 173 INSKIMTI-EDRF--------IHSNQYLFSLMYDNELSKALQEKRIPLRESLSKDQ---- 219 Query: 220 KHGMWEMPGVP---VEAFSGRSQTIREAVGEDASLKSRD---VAALDTRKSKQHVDPEIK 273 K+ +E+ G+ ++ FS R I++ + D A L +R+ K D Sbjct: 220 KNIHFEIEGINDTLIDYFSKRKHQIQDYQANQGFSDTWDGAHAAGLASRRPKPPEDLATL 279 Query: 274 MAEWMQTLKET-GFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKV 332 EW +T+ GF I D L+ + + ++I L E+ Sbjct: 280 EKEWRKTIDNLGGFVINKSTHNKDTSRPLK-------------LNDILKKSIDNLQEKSY 326 Query: 333 QFTYTDVL 340 F+ +D++ Sbjct: 327 AFSKSDLM 334 Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 80/313 (25%), Positives = 134/313 (42%), Gaps = 65/313 (20%) Query: 969 LTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHR 1028 L+ GQ+ A ++L +S+++ V+G AG GKTT ++ +L ES+ V+G+ T + Sbjct: 428 LSKGQKEAINLMLSSSNKYIAVEGIAGSGKTT----MLEQAKLLYESQGVNVIGMAFTGK 483 Query: 1029 AVGEMRS-AGVDAQTLASFLHDTQLQQRSGETP----DFSNT-------LFLLDESSMVG 1076 A + S A + +QT+ +L+ S TP DFS+ ++++DESSM+ Sbjct: 484 ATEALESEAAISSQTIHKYLN-----HLSPTTPHNFWDFSSVKKAETPEVWIVDESSMLT 538 Query: 1077 NTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAI--MKEIVRQT- 1133 + ++ + V GD +QL I G F + V M+EI RQ Sbjct: 539 DHLLSNILEASERRNAKVVFLGDPNQLLPIGTGNAFARMTRKDNEQVPTVRMREINRQEE 598 Query: 1134 -PELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQ 1192 LR+ V ALSG K + +Q ++S+ E Sbjct: 599 GSNLRKTV---------EALSG----KFENIEKQSPLSYIDNSIKE-------------- 631 Query: 1193 KAMLKGEAFPDVPMTLY--EAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREK 1250 +P Y +++ +Y T E ++++ I+ N DR LNS IH + Sbjct: 632 -----------IPQRQYRLNSVIHEYCNYTLEQQDKSAILVARNNDRNELNSEIHKRLIE 680 Query: 1251 AGELGKEQVMVPV 1263 G L E ++ V Sbjct: 681 KGTLKNENLLTSV 693 >UniRef50_B1M9U8 Conjugative relaxase domain protein n=5 Tax=Alphaproteobacteria RepID=B1M9U8_METRJ Length = 981 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 76/260 (29%), Positives = 117/260 (45%), Gaps = 28/260 (10%) Query: 46 SVDKDVFTRLLEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDA 105 ++D F L G P G ++ H G D T + KSVS++ M G ++ Sbjct: 56 AIDAASFRDLCAGLHP-GTGKPLVRGAGPGHWAGVDCTMTPGKSVSVLWMAGTPEQRAAI 114 Query: 106 H-------NQAVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHT 158 +A+ F E L + R G +E +L++ F+H T+R+ +P +HT Sbjct: 115 EAAHRAAVERALSFVT--AEGLVTVRTGAGG-TEQHRPRDLIVGRFDHYTTREGDPNIHT 171 Query: 159 HAVVANV-----TQHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQV-EALG 212 H V NV G +K+ + + E +YA Q+ G YR L E + E G Sbjct: 172 HCVFINVAGAPENAGAGRYKSRTHLTIEP----ERLYAAQLGVGAAYRAALAEGLREQFG 227 Query: 213 YETEVVGKHGMWEMPGVP---VEAFSGRSQTIREAVGEDASLKSRDVAALDTRKSKQHVD 269 + G+ G WE+ VP + AFS RS+ I G AS R++AAL TR+ K+ + Sbjct: 228 LQYREAGR-GQWEVACVPEALLAAFSKRSEQILAYAGAGASSAQREIAALATRRGKEELP 286 Query: 270 --PEIKMAEWMQTLKETGFD 287 PE++ A W + L D Sbjct: 287 TGPELE-ARWRKELAACAID 305 Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 119/486 (24%), Positives = 185/486 (38%), Gaps = 123/486 (25%) Query: 1019 RVVGLGPTHRAVGEM-RSAGVDAQTLASFLHDTQLQQRSG----ETPDFS-----NTLFL 1068 RV+GL P+ A E+ RS G+ AQ +A + D Q +G PD S +TL + Sbjct: 495 RVIGLAPSWVAADELGRSTGIPAQAIARWRQDQT--QAAGPDAIHHPDRSAVLDADTLVM 552 Query: 1069 LDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADV----A 1124 +DE+ MV DM + + G + V GD QL ++ R+ ADV A Sbjct: 553 VDEAGMVATRDMEAVLSAARSVGAKVVLIGDRRQLASVGGASAL-----RAVADVVGRSA 607 Query: 1125 IMKEIVRQTPELREAVYSLINR-DVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQ 1183 +++++ RQT E + A L+ R +VE AL ++ Sbjct: 608 VLEQVRRQTVEWQRAASVLMARGEVEAALRA------------------------YAARD 643 Query: 1184 EAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSM 1243 +L + A ++ A ++ + E LIVT N D LN Sbjct: 644 RIELVAGAEAAQVRALAV--------------WSEQRAAHGEDVLIVTRRNADAAALNVQ 689 Query: 1244 IHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKD 1303 V G LG + + +P RD + R + DAL +++ H Sbjct: 690 ARAVLRGEGRLGPDLITLPA------RDRDDRPVPLALAVGDALRFGESLPH-------- 735 Query: 1304 DGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWT 1363 + L++ GN A E +T P+ G R+R D G W+ Sbjct: 736 ---LGLRN--GN-------RARVEAIT-AEPE-----RGVRLRLALED---GRALEVAWS 774 Query: 1364 VTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNR 1423 A QQ R G++ + I AYA T + AQG + + A+ G + Sbjct: 775 DLA-----------QQPRF---GRKWPQPRIVHAYAGTVYAAQGRTSSAAVMYVGAATDA 820 Query: 1424 KLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAER 1483 + + YV L+R + +V + + DA+ Q D P D V+ ER Sbjct: 821 REL------YVGLTRHRHEARVVVERDR--LDALCRQRQA----DARMPATDAMVL--ER 866 Query: 1484 LFSTAR 1489 LF AR Sbjct: 867 LFREAR 872 >UniRef50_B2I3X4 TrwC protein n=1 Tax=Acinetobacter baumannii ACICU RepID=B2I3X4_ACIBC Length = 378 Score = 79.3 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 63/274 (22%), Positives = 125/274 (45%), Gaps = 29/274 (10%) Query: 1208 LYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTA 1267 +++ +V DY E+R+ +LI+T N DR +LNS++ +K EL +L Sbjct: 72 VHQKLVGDYMRLNKESRDNSLIITPFNSDRVMLNSLVRSEMKKLNELDHNDHNFEILVNT 131 Query: 1268 NIRDGELRRLSTWE-----------THRDALVLVDNVYHRIAGISKDDGLITLQDAEGNT 1316 N + E + ++ +E T +D + ++ + + +G + L D + N Sbjct: 132 NFTEAERKHINNYEPNMTIRFGKSFTDKDTGIKIEKGDYLKVMMKDKEGKLVLIDKDKNK 191 Query: 1317 RLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSD 1376 +P++ E +Y + ++ GD +R T++ + + + + D V + + Sbjct: 192 IKWNPKKGSVE---VYKSEQRKIAKGDVIRITRTKDDEQIKNGERYKIKDIHEDKVIV-E 247 Query: 1377 GQQTREIRPGQEQAEQHIDLAYAITAHGAQGA----------SETFAIALEGTEGNRKLM 1426 GQ +E + +H D Y+ T + +QG S+ A L+ + K++ Sbjct: 248 GQDGKE-KSLSRSGFKHFDYGYSSTVYSSQGLTQGNVFLLLNSQKLANDLKSDKAATKVL 306 Query: 1427 A---GFESAYVALSRMKQHVQVYTDNRQGWTDAI 1457 G S YVA++R + ++Q+YTDN+Q +AI Sbjct: 307 GNTFGTRSFYVAVTREEHNLQIYTDNKQMTREAI 340 >UniRef50_Q6SK28 TraA-like protein n=2 Tax=Arthrobacter aurescens RepID=Q6SK28_ARTAU Length = 1484 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 85/290 (29%), Positives = 138/290 (47%), Gaps = 41/290 (14%) Query: 79 GYDLTFSAPKSVSMMAMLGG--DKRLI-DAHNQAVDFAVRQVEALA-STRVMTDGQSETV 134 GYDLTF+ KS+S++ LG +RL+ DA A++ ++ +E A +TR+ T+G +++ Sbjct: 186 GYDLTFTPVKSISVLWALGDADTRRLVEDAQQAALNDSIEYLETHALATRLGTNGIAQSS 245 Query: 135 LTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH-NGEWKTLSSDKVGKTGFIENVYANQ 193 + G L F H SR +P LHTH VV+N Q G WK++ GK ++ + Sbjct: 246 VKGGLTATAFRHHDSRLGDPNLHTHVVVSNKVQDLAGNWKSID----GKL-----LHRSA 296 Query: 194 IAFGRLYREKLKEQVEALG--YETEVVG--KHGMWEMPGVP---VEAFSGRSQTIREAVG 246 +A Y +++ +E G +E V K + E+ VP + FS RS+ IR ++ Sbjct: 297 VAVSEHYNTRIQAHLEDHGVRFEARTVNGSKQPVMEIASVPRELISLFSKRSEGIRTSLT 356 Query: 247 E---------------DASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAY 291 E A +K A LDTR K+ P+ +AE + + Sbjct: 357 ELRQAYEEQHGHSPDRAALIKLAQAATLDTRPDKE--APKT-LAEQATMWRHEAGTLYTE 413 Query: 292 RDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLA 341 D A + RT T P + G DV A + I +S+++ +T +V+A Sbjct: 414 DDLA-RITGTRTNTIRPIAA-GIDVDAAARRIIDAVSDKRSTWTAQNVMA 461 Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 47/160 (29%), Positives = 67/160 (41%), Gaps = 12/160 (7%) Query: 963 GELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVG 1022 GE L +GQ R +S +V G AG GK++ V +A+ RV+G Sbjct: 569 GEKSHPLDTGQIDLAREFATSSKLLSVGIGAAGTGKSSSMGLVRAAITHAGG----RVIG 624 Query: 1023 LGPTHRAVGEMRSA-GVDAQTLASFLHDTQLQQR-------SGETPDFSNTLFLLDESSM 1074 L P+ A + GV A T FLH + +G T+ ++DE+ M Sbjct: 625 LAPSAVAAANLGGQLGVAAATTDKFLHTNRYPDHDPDRGTAAGPFRVTPGTVVIVDEAGM 684 Query: 1075 VGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRL 1114 G +A ++ AGGG GD QL A+ G RL Sbjct: 685 QGTGKLADVVRVVEAGGGLVRLIGDDRQLSAVQAGGALRL 724 >UniRef50_A5ESN8 Putative ATP-dependent exoDNAse n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5ESN8_BRASB Length = 918 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 83/269 (30%), Positives = 120/269 (44%), Gaps = 39/269 (14%) Query: 3 SIAQVRSAGSAGNYYTDKDNYYVLGSM---GERWAGRGAEQLGLQ--GSVDKDVFTRLLE 57 S+ + ++ YY YY LGS G +A RG LG + +V + F RL E Sbjct: 9 SVVATWNVAASSAYYVRGAEYY-LGSREPEGVWYAPRG--DLGRRDAATVQRQEFARLYE 65 Query: 58 GRLPDGADLSRMQDGSN-RHRPGYDLTFSAPKSVSMMAMLGGD---KRLIDAHNQAV--D 111 G +G L G R P +DLTFSAP+SVS+ + + L A +AV Sbjct: 66 GLGENGQSLITNSGGKAIRRVPAFDLTFSAPRSVSLAWAFADEDLRRNLEAAQERAVRAT 125 Query: 112 FAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQE---------PQLHTHAVV 162 A + EA+ + R E V L ALF H SR E P LHTHAVV Sbjct: 126 LATIEQEAIYARRGKDGAYVEKV---ALTAALFQHGESRPAEHADGRLFGDPNLHTHAVV 182 Query: 163 ANV-TQHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKH 221 N+ T+ +G L S + ++A G +Y L ++ LG+ + VG++ Sbjct: 183 LNMATRADGTVGALHSTVLRDW---------KMAAGAVYHAALANEMTDLGFGIDRVGRN 233 Query: 222 GMWEMPGV---PVEAFSGRSQTIREAVGE 247 G +E+ G+ + FS R Q I + + E Sbjct: 234 GTFELAGIGDQAITYFSARRQEIEKELAE 262 >UniRef50_UPI00016C53CF TrwC protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C53CF Length = 818 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 132/547 (24%), Positives = 219/547 (40%), Gaps = 112/547 (20%) Query: 968 KLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTH 1027 KL+ Q + R + + DR +++G AG GKT + + ++ RP VV L P+ Sbjct: 334 KLSPEQASIARHVWNSPDRVILIRGAAGTGKTHTMKTTFAGID------RPVVV-LAPSA 386 Query: 1028 RAV-GEMRSAGV-DAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYA 1085 A G +R G +A T+A FL D + Q ++ N + +DE+ ++G + + Sbjct: 387 DASRGVLRKEGFTNADTVARFLIDQEFQHKA------KNGVIWVDEAGLLGMRQTRQVFD 440 Query: 1086 LIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLIN 1145 L R V GD Q +I G R+ + + VA + +I RQ +EAV +L Sbjct: 441 LAEKLNARVVLQGDKQQHGSIERGTTLRVLEQFAGLPVAQLTDIRRQKGRYKEAVTALSK 500 Query: 1146 RDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVP 1205 + L+G +++ + W S + L + +A+ A D+ Sbjct: 501 ---GKMLAGYDTL-------NDLGWVK-------STTGNTPLVDEYMEAIDTKRADQDIT 543 Query: 1206 MTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLN 1265 + AI + EA E T + ++R ++ H++ Q +VP+ Sbjct: 544 DRVL-AIAPTHA----EAAEVTDAIRLRLQERGIVAKEEHEI----------QTLVPLHW 588 Query: 1266 TANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAV 1325 T R G+L R E + YHR G K + + D + RL Sbjct: 589 TEAER-GDLSRYEGTEVVQ---------YHRNGGTQKAGQRVAIADFKPGMRL-----GP 633 Query: 1326 AEGVTLYTPDTIRVGTGDRMRFT---KS------------------DRERGYVANSVWTV 1364 A ++Y +TI++ GDR+R T KS D + G V N+ WT Sbjct: 634 ASTFSVYGKNTIKLAAGDRIRITAPGKSADTKHKLDNGTLYEVKGFDEKGGIVLNNDWT- 692 Query: 1365 TAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRK 1424 ++ D L+ G Y T+H +QG + + G E Sbjct: 693 --LAPDFAHLTHG--------------------YVTTSHASQGKTVDKVLIAMGQESLPA 730 Query: 1425 LMAGFESAYVALSRMKQHVQVYTD-NRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAER 1483 + A E YV++SR + ++TD +AI A + +A ++F P P R M A Sbjct: 731 ISA--EQFYVSVSRGRDKATIFTDVPTPELREAIQKADTRKSATELFNPLP-RNRMYA-- 785 Query: 1484 LFSTARE 1490 + ARE Sbjct: 786 ILKRARE 792 >UniRef50_D1ZY95 Whole genome shotgun sequence assembly, contig_3830 (Fragment) n=1 Tax=Sordaria macrospora RepID=D1ZY95_SORMA Length = 298 Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 40/85 (47%), Positives = 52/85 (61%), Gaps = 5/85 (5%) Query: 20 KDNYYVLGSM--GERWAGRGAEQLGLQGSVDKDVFTRLLEGRLPDGADLSRMQDGSNRHR 77 +DNYY WAG GA +LGL G VD D F ++L G LP+G L + HR Sbjct: 187 RDNYYTADQAEGASAWAGEGAVELGLSGPVDTDRFEQVLAGELPNGVVLDAKR---GEHR 243 Query: 78 PGYDLTFSAPKSVSMMAMLGGDKRL 102 G+D+T S PKSVS++A++GGD RL Sbjct: 244 AGWDVTMSVPKSVSILALVGGDTRL 268 >UniRef50_A1RCJ2 Putative TraA-like conjugal transfer protein n=1 Tax=Arthrobacter aurescens TC1 RepID=A1RCJ2_ARTAT Length = 1158 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 109/399 (27%), Positives = 168/399 (42%), Gaps = 95/399 (23%) Query: 23 YYVL-GSMGERWAGRGAEQLGLQGS-VDKDVFTRLL-EGRLPDG-----------ADLSR 68 YYV G+ W GRGAEQLGL G+ V +D L GR PDG A L+ Sbjct: 35 YYVARGNPPGVWTGRGAEQLGLAGTEVSEDQMRALFGAGRHPDGVHRLGAAYPSYATLAP 94 Query: 69 MQ------------------DGSNRHR-------------PGYDLTFSAPKSVSMMAMLG 97 Q + R+R G+DL F+ KS S++ LG Sbjct: 95 YQQRVAERLAEWESLNGRPPSAAERNRIAAVEARRGRRAVAGFDLVFTPVKSASVLWALG 154 Query: 98 GDK---RLIDAHNQAVDFAVRQVEALAS-TRVMTDGQSETVLTGNLVMALFNHDTSRDQE 153 G + + DAH++AV ++ +E+ A+ TRV G ++ TG L+ A+F+H SR + Sbjct: 155 GAEVRGAVEDAHHEAVLSSLGWLESHAAYTRVGRGGVAQIDATG-LICAMFDHRESRAGD 213 Query: 154 PQLHTHAVVAN-VTQHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQ----- 207 P LHTH VAN V +G+W++L + +YA +A Y + ++ Sbjct: 214 PDLHTHVAVANKVCGVDGKWRSLDA---------RGLYALGVAASERYNTRFEDALARRL 264 Query: 208 -VEALGYETEVVGKHGMWEMPGVPVEAFSGRSQTIREAVGED--ASLKSRDVAALDTRKS 264 VE + + + E+ GVP E SQ R A ED A L+ R+ A R+ Sbjct: 265 GVEFVERPSNRRDLRPVREIDGVPAELLRHFSQ--RRAAIEDRYAELR-RNYRATHGREP 321 Query: 265 KQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLT------------------- 305 + ++ ++T + G A R A+Q D T Sbjct: 322 DRATQIQLAQQATLETREAKG----AARSLAEQVTDWTTQARQLIGARRLDRLASDCMGR 377 Query: 306 -PGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLART 343 + D PDV + +Q + ++E++ +T +V A T Sbjct: 378 ERSAGAADVPDVDELASQIVGTIAEQRSTWTVWNVHAET 416 >UniRef50_D0YT16 DNA primase catalytic core n=1 Tax=Mobiluncus mulieris 28-1 RepID=D0YT16_9ACTO Length = 1125 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 20/214 (9%) Query: 66 LSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGG-DKRLI--DAHNQAVDFAVRQVEALAS 122 + + ++ +R G+DLTF+ K +S++ L D R + H +A++ + +E A Sbjct: 127 VEKSKEKQSRAVHGFDLTFAPSKDISVLWALSDEDTRAVMEQCHREAIEQTLAMLEDKAL 186 Query: 123 TRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH-NGEWKTLSSDKVG 181 G E V TG L+ A F+H +R+ +P LHTH VV N Q +G+W+T+ S Sbjct: 187 FTRRGKGGVEQVKTGGLIAAGFDHWDTREGDPHLHTHVVVVNRVQGPDGKWRTIDS---- 242 Query: 182 KTGFIENVYANQIAFGRLYREKLKEQVEALGYE-----TEVVGKHGMWEMPGVP---VEA 233 + G + V A+ ++L E+ LG++ T V GK +W + G+ V+ Sbjct: 243 RHGLMPAVVGLSEAYDSAIMDRLTER---LGFDWTEVSTTVSGKP-VWGINGLNRDLVKE 298 Query: 234 FSGRSQTIREAVGEDASLKSRDVAALDTRKSKQH 267 FS R I G+ A+ + A DTRK K H Sbjct: 299 FSTRRGQILRERGDGATREDDKKAWSDTRKDKHH 332 >UniRef50_D2Q9V3 TrwC relaxase n=2 Tax=Bifidobacterium dentium RepID=D2Q9V3_9BIFI Length = 1394 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 92/328 (28%), Positives = 140/328 (42%), Gaps = 64/328 (19%) Query: 16 YYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRLPDGADLS-------- 67 YYT K G+ RW G GA+ LG GSV + ++ + + D D S Sbjct: 34 YYTAK------GNPPGRWIGSGAKLLG--GSVGRTASSKTVRSLINDSRDPSTGRFLGDV 85 Query: 68 RMQDGSNRHRP--GYDLTFSAPKSVSMMAMLGG--DKRLID-AHNQAVDFAVRQVE-ALA 121 ++ G + P G+D T PKSVS++ G +R ID +A D + +E A Sbjct: 86 KLTKGDDGEPPVAGWDYTTRQPKSVSILWAFGDAETRRGIDECLQKATDMTIAYLEDEYA 145 Query: 122 STRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH--NGEWKTLSSDK 179 STR G + G + +F+H +RD +PQ H H ++N + +G W L K Sbjct: 146 STRAGQGGVASVACDG-VAGFVFDHFDTRDGDPQPHKHITISNRVRRSSDGVWTALDGRK 204 Query: 180 VGKTGF-IENVYANQIA------FGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP-- 230 + + I ++ N + FG + K+ EQ G ++ + E+ GVP Sbjct: 205 LYSSMVEISEIHENLLQDLLTQRFGWTWTTKVNEQ----GTKSVIN------EVDGVPAE 254 Query: 231 -VEAFSGRSQTIREAV-----------GEDASLKSRDVAALD----TRKSKQHVDPEI-- 272 +EAFSGR I + V G S + R L+ TRK+K + P + Sbjct: 255 LIEAFSGRHSEIAKQVEQRVQQEEAQTGRPVSFQRRAQIDLEVWQATRKAKPEIQPSLAE 314 Query: 273 KMAEWMQTLKETG--FDIRAYRDAADQR 298 K W + L +T DIR D + R Sbjct: 315 KQRHWWKKLGQTAPDIDIRHVWDTVNSR 342 >UniRef50_B4V4K9 Putative uncharacterized protein n=1 Tax=Streptomyces sp. Mg1 RepID=B4V4K9_9ACTO Length = 1359 Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 82/293 (27%), Positives = 133/293 (45%), Gaps = 29/293 (9%) Query: 79 GYDLTFSAPKSVSMMAMLGGDK---RLIDAHNQAVDFAVRQVEALASTRVMT---DGQ-S 131 G D+T PKS+S L G + R+ + +V AVR +E A+ + DGQ + Sbjct: 247 GVDITLDLPKSISAAYGLAGAELAGRIEEDWLASVSEAVRALEEWAAYGMAGHHGDGQQA 306 Query: 132 ETVLTGNLVMALFNHDTSRD-----QEPQLHTHAVVANVTQH-NGEWKTLSSDKVGKTGF 185 E V T L+ H ++R +P LH H +A++ + +G+W+T++ + Sbjct: 307 ERVATSGLIGWTTLHRSARPVDGSPGDPHLHVHVNIAHLAKCVDGKWRTIAGGGEDLHRY 366 Query: 186 IENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPV---EAFSGRSQTIR 242 + N+IA GRL R +L +E G E G G WE+ GV EAFS R + + Sbjct: 367 AHLI--NEIAEGRL-RARL---IEGYGARFERSGSTGAWELAGVDEGLREAFSRRHRQVI 420 Query: 243 EAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEW-MQTLKETGFD------IRAYRDAA 295 + VGE A+ + + AA + ++K+ PE W + E G + + A Sbjct: 421 DLVGEGATRERQKTAARRSAETKEDAGPEAPREAWRTRAAAELGGEGAVDAMVAAALPGP 480 Query: 296 DQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILP 348 D A + GP D+ + + A GL+ + ++T V+A V LP Sbjct: 481 DGSAPPLSAGGGPRMPGPADIAERIWDAAHGLTASRKTVSHTHVMAAVVRTLP 533 >UniRef50_Q84GD9 TraA n=5 Tax=Corynebacterium glutamicum RepID=Q84GD9_CORGL Length = 1164 Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 86/312 (27%), Positives = 141/312 (45%), Gaps = 54/312 (17%) Query: 61 PDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGD---KRLID-AHNQAVDFAVRQ 116 P G L R S PG+DLTF APKSVS++ L D + +D AH++AV A+ Sbjct: 83 PSGHKLGRAPKSSGV--PGFDLTFCAPKSVSLIWGLTDDTDVRSTVDRAHHRAVTTALSY 140 Query: 117 VEALASTRVMTDGQSETVLTGNLVMAL----FNHDTSRDQEPQLHTHAVVANVT-QHNGE 171 + A D +++ + V AL + H TSR +P LH H ++AN +G+ Sbjct: 141 LSEHAGYTRRADDHDRSMMIIDRVEALSGVRYEHRTSRAGDPHLHAHVLLANKQLCRDGK 200 Query: 172 WKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVE---ALGYETEVVGKHGMWEMPG 228 W+TL D V ++Y A G +Y+ L+E++ + + V HG E+ G Sbjct: 201 WRTL--DGV-------SLYHEARAAGTIYQAVLREELSRTLGVAWADTV---HGCAEIIG 248 Query: 229 VP----VEAFSGRSQTIRE-----AVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQ 279 + +E FS R++ I + VG DA+ + + +K++Q D ++ ++E Q Sbjct: 249 LDDRGLIEDFSTRAREIDQWAADNGVGSDAAFER-----MGQKKTRQVKDLDMPLSELEQ 303 Query: 280 TLKETGFDIRAYRDAADQRADLRTLTP---GPASQDGPDVQQAVTQAIAGLSERKVQFTY 336 K + A R + L+P P S P V + + ++ + FT Sbjct: 304 NWKARVAETSA-------RKFVEALSPHSHSPQSVALP----TVDEVLDAVTCERSTFTR 352 Query: 337 TDVLARTVGILP 348 DV+ +LP Sbjct: 353 ADVVEAATELLP 364 Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 54/193 (27%), Positives = 81/193 (41%), Gaps = 13/193 (6%) Query: 968 KLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTH 1027 +L++ Q A R ++ + +VV AG GKT+ +A +A E +VVGL PT Sbjct: 447 QLSADQAEAMRAVVSSRYLASVVIAPAGAGKTSSLKAARAAW----EQAGKQVVGLAPTG 502 Query: 1028 RAVGEMRSAGV--DAQTLASFL---HDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMAR 1082 +A M V + TLA L D ++Q ++ + ++DE+ MV +M R Sbjct: 503 KAADVMVGEDVAHSSSTLARVLRRVEDQDVEQAVATLGWSTDHVIVVDEAGMVSTPEMVR 562 Query: 1083 AYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYS 1142 L A R V GD Q A+ D ++E+ RQ E A Sbjct: 563 VLELAHAADARVVLVGDPYQYGAVKARGGLLATLAHEVPDAVELREVFRQHDEKERAASK 622 Query: 1143 LINR----DVERA 1151 + DVERA Sbjct: 623 RLRTGVLPDVERA 635 >UniRef50_UPI00005104AE conjugative relaxase domain protein, TrwC/TraI family n=1 Tax=Brevibacterium linens BL2 RepID=UPI00005104AE Length = 1183 Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 60/173 (34%), Positives = 88/173 (50%), Gaps = 23/173 (13%) Query: 79 GYDLTFSAPKSVSMMAMLGG---DKRLIDAHNQAVDFAVRQVEA-LASTRVMTDGQSETV 134 G+DLTFS PKS+S + + + L AH+ A+ V +E +ASTRV G + Sbjct: 136 GFDLTFSPPKSLSTLWGVADAPMQELLAQAHHAAMRDTVAMLEERVASTRVGKGGIARMP 195 Query: 135 LTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ-HNGEWKTLSSDKVGKTGFIENVYANQ 193 +TG + A F+H SR +PQLHTH VV+N Q +G+W++L S ++ K Sbjct: 196 ITGVIATA-FDHYDSRAADPQLHTHLVVSNKVQGEDGKWRSLDSRRLHKA---------T 245 Query: 194 IAFGRLYREKLKEQV-EALGYETEVV----GKHGMWEMPGVPVE---AFSGRS 238 +A Y L + + LG E V ++ WE+ G+P E FS RS Sbjct: 246 VALSASYNAYLIDHTADLLGLTWEPVDRGKDRNTGWEITGIPAELIAEFSRRS 298 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 46/149 (30%), Positives = 66/149 (44%), Gaps = 13/149 (8%) Query: 968 KLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTH 1027 +L Q AA I + ++ G AG GKTT R + A + V+GL P+ Sbjct: 527 RLADDQAAAVTRIACSGRSLDLLVGPAGAGKTTALRGLHRAWTA--RHGQGSVIGLAPSA 584 Query: 1028 RA---VGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFS-NTLFLLDESSMVGNTDMARA 1083 A +GE S GV A+ A FL++ + + DF L LLDE+S+ G + R Sbjct: 585 AAAEVLGE--SLGVQAENTAKFLYEHERGRW-----DFQPGQLILLDEASLAGTLTLDRI 637 Query: 1084 YALIAAGGGRAVASGDTDQLQAIAPGQPF 1112 G + V GD QL ++ G F Sbjct: 638 AEHAGQAGAKLVLVGDPAQLSSVETGGAF 666 >UniRef50_B5ZL31 TrwC relaxase n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZL31_GLUDA Length = 322 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 69/213 (32%), Positives = 106/213 (49%), Gaps = 34/213 (15%) Query: 77 RPGYDLTFSAPKSVSMMAMLGGD---KRLIDAHNQAV----DFAVRQVEALASTRVMTDG 129 R GYDL F+APKSVS++ +G D R+ A +AV D+A+R + + R G Sbjct: 114 RVGYDLQFAAPKSVSVLWAMGTDIQRARIESAQAKAVFAALDYALR-TGLIVTRRGHNGG 172 Query: 130 QSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDKVGKTGFIEN- 188 Q ET L+ F H TSR +PQ+HTHAV+ NV + K G TG ++N Sbjct: 173 QRET--PAELMAGTFLHTTSRAGDPQIHTHAVLMNVCRR----------KDGSTGTVDNR 220 Query: 189 -VYANQIAFGRLYREKLKEQVEA-LGYETEVVGKHGMWEMPGVPV---EAFSGRSQTIRE 243 + +Q G +YR L E +E +G T G++ + + GV E FS R R Sbjct: 221 ELLLHQQEMGAVYRLALSEALERDIGLTTLKDGRN--FRVAGVAPSVEERFSKR----RA 274 Query: 244 AVGEDASLKSRDVAALDTRKSKQHVDPEIKMAE 276 A+ ++A + R + R++ +H+ + A+ Sbjct: 275 AIEQEA--RKRGIQTAHHREAAEHISRNTRAAK 305 >UniRef50_Q0QW05 Putative uncharacterized protein n=1 Tax=Neisseria lactamica RepID=Q0QW05_NEILA Length = 831 Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 47/220 (21%) Query: 35 GRGAEQL-----GL---------QGSVDKDVFTRLLEGRLP----DGADLSRMQDGS-NR 75 G GAE+L GL Q + D+++F LL+G +P + ++ ++G+ NR Sbjct: 37 GNGAEELFRQYGGLEKHGNLKFGQNAKDRNLFHALLKGEVPIFDPETKEIIGFKEGAKNR 96 Query: 76 HRPGYDLTFSAPKSVSMMAMLGGDKR------------LIDAHNQAVDFAVRQVEALAST 123 YD TFSAPKSVS++ L ++ L A +A D V ++ Sbjct: 97 KTGAYDFTFSAPKSVSLLYALAEERSESDQAARKLSRALKTAFKEANDIVVAHMQEKVLM 156 Query: 124 RVMTDGQSETVLTGNLVMALFNHDTSRDQ-----EPQLHTHAVVANVT----QHNGEWKT 174 DG+++ V ++A F HD +R +P LH H V N NG+ Sbjct: 157 NNFVDGKNQKVFNNQAIIAQFLHDDARRNKDGFVDPSLHCHNVFFNEVIAGYDENGQAIF 216 Query: 175 LSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYE 214 S D + + + + A+G+ +R LK++++ LG E Sbjct: 217 KSIDNLA-------LISMRNAYGQFFRNILKQKIKDLGIE 249 Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust. Identities = 60/287 (20%), Positives = 107/287 (37%), Gaps = 63/287 (21%) Query: 979 MILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMR---- 1034 +I+ + VQG AG GK+ V + + E R + +V E+ Sbjct: 512 LIVRGKSKIACVQGDAGTGKSYAASLVKTVSEIYAERRRATNAAIASVKDSVPELNLMGM 571 Query: 1035 ------------SAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMAR 1082 G+ +QT+A FL + +++G+ + L ++DE+SM+ D R Sbjct: 572 AFMGKTAKDLEDGTGIKSQTIAKFLLN---WEKNGKEVNNDFNLVIIDEASMISAADARR 628 Query: 1083 AYALI-AAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVY 1141 + I R + GD +Q ++ G F Q Sbjct: 629 LFEYIDLCPNTRCIFMGDVNQFSSVGRGTIFDQMQK------------------------ 664 Query: 1142 SLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAF 1201 +G+E+ K + RQ+ + V F Q K+ + ++ + F Sbjct: 665 -----------AGVETTKLGNIRRQK-TRESKVVVQRFKKGQINKMFDFAERRKI----F 708 Query: 1202 PDVPM--TLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHD 1246 +VP L +V+DYT + +A E+ + ++ N R LN I D Sbjct: 709 EEVPNIDNLISKMVQDYTDKF-KAGEEVIALSGTNAVRNELNRRIRD 754 >UniRef50_Q44349 Conjugal transfer protein traA n=12 Tax=Rhizobiales RepID=TRAA_AGRT5 Length = 1100 Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 134/542 (24%), Positives = 211/542 (38%), Gaps = 136/542 (25%) Query: 968 KLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTH 1027 +L+ Q+AA I + R V G AG GKTT +A A + RVVG Sbjct: 381 RLSEEQKAAIECIAGPA-RIAAVVGRAGAGKTTMMKAAREAWELAGY----RVVGGALAG 435 Query: 1028 RAV-GEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYAL 1086 +A G + AG++++TL+S+ +L+ G + T+F++DE+ MV + MA Sbjct: 436 KASEGLDKEAGIESRTLSSW----ELRWNRGRDVLDNKTVFVMDEAGMVASKQMAGFVDA 491 Query: 1087 IAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPE-LREAVYSLIN 1145 + G + V GD +QLQ I G FR R A ++ I RQ + +R+A L Sbjct: 492 VVRAGAKIVLVGDPEQLQPIEAGAAFRAIVDRIG--YAELETIYRQREDWMRKASLDLAR 549 Query: 1146 RDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVP 1205 +VE+AL+ ++ A++ + LK EA Sbjct: 550 GNVEKALA--------------------------LYNANARIVGER----LKAEAV---- 575 Query: 1206 MTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLN 1265 E ++ D+ R + + TLI+ HL D R+LN M + + G +G+ V Sbjct: 576 ----ERLIADWN-RDYDQTKTTLILAHLRRDVRMLNVMAREKLVERGIVGEGH----VFR 626 Query: 1266 TANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAV 1325 TA DGE R +H AG D ++ L+ N L+ + + Sbjct: 627 TA---DGERR------------------FH--AG----DQIVFLK----NETLLGVKNGM 655 Query: 1326 AEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRP 1385 V P+ I GDR D R V Sbjct: 656 IGHVVEAVPNRIVAVVGDR------DHRRHVVV--------------------------- 682 Query: 1386 GQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQV 1445 +++ ++D YA T H +QGA+ L +R L YVA++R ++ +Q+ Sbjct: 683 -EQRFYSNLDHGYATTIHKSQGATVDRVKVLASLSLDRHL------TYVAMTRHREDLQL 735 Query: 1446 YTDNRQ-----GWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAV 1500 Y R G ++ K T D K RE + F+ R L + R + Sbjct: 736 YYGCRSFAFNGGLAKVLSRKNAKETTLDYERGKLYREALR----FAENRGLHIMQVARTM 791 Query: 1501 LR 1502 LR Sbjct: 792 LR 793 >UniRef50_A3FG49 ORF16 n=1 Tax=Amycolatopsis benzoatilytica RepID=A3FG49_9PSEU Length = 1558 Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 113/432 (26%), Positives = 177/432 (40%), Gaps = 71/432 (16%) Query: 956 PLMERVPGEL-MEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPE 1014 P +E + EL LT QRAA I+ + V+ G AG GK+ V + + Sbjct: 533 PELEMLKVELSATTLTEDQRAAVLGIVSSGRAADVLIGPAGTGKSY---TVATLTQAWSQ 589 Query: 1015 SERPRVVGLGPTHRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPD--FSNTLFLLDES 1072 + RV+GL + RA + S G+D+ + FL + +GE D LF++DE+ Sbjct: 590 NTGGRVMGLATSQRATDVLNSEGLDSINTSQFLKRFTPDETTGEARDQVRPGDLFVVDEA 649 Query: 1073 SMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQ 1132 M G ++AR AL+ GGG+ + +GD QL A+ G L Sbjct: 650 GMSGTDELARISALVEQGGGKLLYTGDHRQLAAVKAGGMLEL------------------ 691 Query: 1133 TPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQ 1192 L N + LESV+ R E W + S+ + L+E Sbjct: 692 ----------LAN---DNGAYELESVR-----RFEADWEKQASI-RLRVGDTSVLSEYDD 732 Query: 1193 KAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAG 1252 + L+G + + EA VR Y T E + LIV N+D L++ ++R + Sbjct: 733 RGRLRGGTMEE----MREAAVRGYVADTLEGLDSLLIVRS-NDDATDLSA---EIRAQLV 784 Query: 1253 ELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIA----GISKDDGLIT 1308 ELGK V VL A RDG L + D + N Y G+ + + T Sbjct: 785 ELGK--VDSEVLTQA--RDGNLISVG------DVIQARKNNYDIEVQGGRGMVVNREVYT 834 Query: 1309 LQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVS 1368 ++ + RLI+ A+G T Y PD+ + + + +V T +S Sbjct: 835 VRGVDDRGRLIA---ETADGATAYLPDSY---VDQHVTLAYASTKHAAQGRTVDTGHTLS 888 Query: 1369 GDSVTLSDGQQT 1380 D V+++ G+Q Sbjct: 889 PDYVSMTRGKQC 900 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 49/143 (34%), Positives = 64/143 (44%), Gaps = 24/143 (16%) Query: 80 YDLTFSAPKSVSMM--------AMLGGDKRLIDAHNQAVDFAVRQVEALASTRVMTDGQS 131 YD TFS KSVS+ A DK ++ AH +AVD A+ +E + V T Sbjct: 149 YDFTFSPVKSVSVYYTALVSAGAHEAADK-VLKAHREAVDVALGYLEKHGAY-VRTGYHG 206 Query: 132 ETV----------LTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDKVG 181 +TV TG L + F+H TSR EPQLH HA V N Q + + D G Sbjct: 207 KTVNGRSVGKYERATG-LNVIKFDHSTSRANEPQLHCHAAVLNRVQTESDGVIRALDAKG 265 Query: 182 KTGFIENVYANQIAFGRLYREKL 204 E V +A+ R +KL Sbjct: 266 FRPIKEAV---SVAYERALEDKL 285 >UniRef50_B9K371 Ti-type conjugative transfer relaxase TraA n=2 Tax=Bacteria RepID=B9K371_AGRVS Length = 1356 Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 53/147 (36%), Positives = 76/147 (51%), Gaps = 10/147 (6%) Query: 968 KLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTH 1027 KL+ Q+ A I +R ++V G AG GKTT +M A + E+ +VVG Sbjct: 381 KLSDEQKVAVERIT-GDERLSLVVGRAGAGKTT----MMKAAREVWEANGYKVVGGALAG 435 Query: 1028 RAV-GEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYAL 1086 +A G + AG+ ++TLAS+ QLQ + G T+F++DE+ MV + MA + Sbjct: 436 KAAEGLEKEAGIKSRTLASW----QLQWKEGRAALDDKTVFVIDEAGMVASRQMAEFVSA 491 Query: 1087 IAAGGGRAVASGDTDQLQAIAPGQPFR 1113 I G + V GD DQLQ I G FR Sbjct: 492 IDRAGAKLVLVGDADQLQPIEAGGAFR 518 Score = 43.5 bits (101), Expect = 0.073, Method: Compositional matrix adjust. Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 8/129 (6%) Query: 1319 ISPREAVAEGVTLYTPDTIR-VGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDG 1377 + R +A+G T D +R GD++ F K+++ G + + V + G Sbjct: 613 LQERGIIAQGTEFRTEDGMRNFSPGDQIVFLKNEKSLGVMNGMIARVVVAEKGKIVAEVG 672 Query: 1378 QQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALS 1437 + R + Q +++D YA T H +QGA+ L + +R L +YVAL+ Sbjct: 673 SENRRVEIDQ-AFYRNVDHGYATTIHKSQGATADRVKVLASSMFDRHL------SYVALT 725 Query: 1438 RMKQHVQVY 1446 R + V++Y Sbjct: 726 RHRDSVELY 734 >UniRef50_C2AVA8 TrwC relaxase n=1 Tax=Tsukamurella paurometabola DSM 20162 RepID=C2AVA8_TSUPA Length = 1024 Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 66/214 (30%), Positives = 106/214 (49%), Gaps = 36/214 (16%) Query: 79 GYDLTFSAPKSVSMMAMLGGD--KRLIDA-HNQAVDFAVRQVEALA-STRVMTDGQSETV 134 GYDLTF+ KSVS++ LG + +R I+A H +A D ++R +E A TR G+++ + Sbjct: 185 GYDLTFTPVKSVSVLWSLGDEDTRRTIEACHREAADESIRYLEDNALVTRRGGKGEAQ-I 243 Query: 135 LTGNLVMALFNHDTSRDQEPQLHTHAVVAN-VTQHNGEWKTLSSDKVGKTGFIENVYANQ 193 G LV+A F+H +RD EP LHTH V+N V +G W ++ T + + Sbjct: 244 DAGGLVIAAFDHYDNRDGEPNLHTHYAVSNKVLGSDGRWSSIDG-----TPWFKAASTAS 298 Query: 194 IAFGRLYREKLKEQVEALGYE----TEVVGKHGMWEMPGVP---VEAFSGRSQTIRE--- 243 + +KL ++ LG E ++ K + E+ G+ + + +GR+ TI + Sbjct: 299 ARYNAALADKLTDR---LGVEFRSRSKGADKEPVLEIAGITDTRIASHAGRTATIEQRYA 355 Query: 244 ------------AVGEDASLKSRDVAALDTRKSK 265 A G A + R A LDTR++K Sbjct: 356 ELEADYIDRHQRAPGRAARYQLRQKANLDTRRAK 389 >UniRef50_Q0RC71 Putative uncharacterized protein n=2 Tax=Frankia alni ACN14a RepID=Q0RC71_FRAAA Length = 1471 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 94/326 (28%), Positives = 140/326 (42%), Gaps = 65/326 (19%) Query: 47 VDKDVFTRLLEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGD---KRLI 103 V +D R LE R P L G+D+T SAPKSVS++ G D + L Sbjct: 219 VHRDELARFLEEREPPTVVL------------GFDVTASAPKSVSLLWAFGDDDLRRDLA 266 Query: 104 DAHNQAVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVA 163 +A N AVD A+ +E A + DG + + L F HD SR +EP LH H V+A Sbjct: 267 EAMNVAVDAAIGYLERQAGVG-LVDGHNRPGV--GLAGVSFLHDISRAEEPHLHIHTVLA 323 Query: 164 N-----VTQHNGE------------WKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKE 206 N + +GE W+T+ S E ++A+ G + L+ Sbjct: 324 NAVPIPLLDEDGEPLRDGAGRPRMVWRTVDS---------ELLHAHVKTAGYVAAAVLRH 374 Query: 207 QVEA-LGYETEVVGKHGMWEMPGVPVE---AFSGRSQTIREAVGEDASLKSRDVAAL--- 259 ++ A G + V ++G+ E+ G+P + FS R I + E + + D AL Sbjct: 375 ELSARRGLQWGPV-RNGVAELAGLPADLLAVFSSRRAQIDAELAELVASGATDGPALREA 433 Query: 260 ---DTRKSKQ-HVDPEIKMAEW--MQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDG 313 TR K+ D EI+ A+ ++ T D+ AA R D R GP D Sbjct: 434 VQRGTRAPKRAQADAEIRTAQHARLEAAGWTAADVL----AAGARTDYRPTAIGP--DDL 487 Query: 314 PDVQQAVTQAIAGLSERKVQFTYTDV 339 ++ + +T GL+ R FT DV Sbjct: 488 AELAELLT-GPDGLTARSATFTARDV 512 Score = 43.9 bits (102), Expect = 0.056, Method: Compositional matrix adjust. Identities = 48/160 (30%), Positives = 72/160 (45%), Gaps = 11/160 (6%) Query: 976 ATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRS 1035 A R +L ++D V+ G AG GKT R + V +L ++ R V+G R E+ Sbjct: 627 AVRALLTSTDLVRVLVGPAGSGKTEAMRLL---VAVLRDAGR-TVLGAAHGGRQTEELTG 682 Query: 1036 -AGVDAQTLASFLHDTQLQQRSGETPDF--SNTLFLLDESSMVGNTDMARAYALIAAGGG 1092 G+D + +A +L L + D T+ +LDE++ V + AR G Sbjct: 683 RLGIDGRVVAGWL---TLLDHADRPADIWPPGTMLILDEATHVTTRNAARLLRYATDTGT 739 Query: 1093 RAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQ 1132 +A GD QL AI PG F + DVA + + RQ Sbjct: 740 VILALGDPAQLGAIGPGGWF-AHLAATLPDVATLTTVHRQ 778 >UniRef50_A5CLM4 Putative conjugal transfer protein, Dtr system n=1 Tax=Clavibacter michiganensis subsp. michiganensis NCPPB 382 RepID=A5CLM4_CLAM3 Length = 1492 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 56/176 (31%), Positives = 85/176 (48%), Gaps = 20/176 (11%) Query: 79 GYDLTFSAPKSVSMMAMLGGD---KRLIDAHNQAVDFAVRQVEALA-STRVMTDGQSETV 134 G+DL S KSVS++ LG K + A QAV + +E A +TR T+G ++ Sbjct: 187 GFDLVCSPSKSVSVLWALGDTETRKAIEAAQEQAVRDTIGYLEREAIATRAGTNGVAQIE 246 Query: 135 LTGNLVMALFNHDTSRDQEPQLHTHAVVAN-VTQHNGEWKTLSSDKVGKTGFIENVYANQ 193 + G + +F H SR+ +PQLH H VVAN V +G+W+T+ S + + + + N Sbjct: 247 VEGGIAATVFRHYDSRNGDPQLHDHVVVANKVKGVDGKWRTIDSKLLHRMNVPASEFYNA 306 Query: 194 IAFGRLYREKLKEQVEALGYETEV----VGKHGMWEMPGVP---VEAFSGRSQTIR 242 + R LG T GK + E+ GV ++ FS RS +IR Sbjct: 307 AVMSEVCRR--------LGVTTTARVPSPGKRPVMEIAGVDPDLIDTFSSRSASIR 354 Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 48/159 (30%), Positives = 70/159 (44%), Gaps = 7/159 (4%) Query: 958 MERVPGELMEKLTSGQRAATRMILETSDRFTVVQ-GYAGVGKTTQFRAVMSAVNMLPESE 1016 ER + L +GQR R TSDR VV G AG GKTT R +A+ E Sbjct: 553 FERTAAQHTGPLDAGQRDLARE-FATSDRELVVGIGPAGAGKTTALRLAATAL----EDG 607 Query: 1017 RPRVVGLGPTHRAVGEMRSA-GVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMV 1075 R++GL P+ A + A G++A T+ FL + + + + ++DE+ M Sbjct: 608 GRRMIGLAPSAPAASVIAEAVGIEATTIHGFLTAHAQAELPAKYEVRAGDVLVVDEAGMA 667 Query: 1076 GNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRL 1114 G +A + + G GD QL A+ G RL Sbjct: 668 GTQRLAALHTIAREYGAHVRLIGDDRQLSAVEAGGALRL 706 >UniRef50_C0E195 Putative uncharacterized protein n=1 Tax=Corynebacterium matruchotii ATCC 33806 RepID=C0E195_9CORY Length = 1433 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 60/199 (30%), Positives = 94/199 (47%), Gaps = 27/199 (13%) Query: 61 PDGADL----SRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDK---RLIDAHNQAVDFA 113 P G D+ ++ Q + G+D TFS KSVS++ L K ++ + H++AV A Sbjct: 161 PSGDDIVSWINKQQSKVRQAAAGFDWTFSPTKSVSVLWALADKKTANKIEECHHKAVQEA 220 Query: 114 VRQVEA-LASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH-NGE 171 + E + TR+ T+G + V T L+ A F H +R +P LH+H +V+N Q +G Sbjct: 221 LSWAEKNVIYTRIGTNGIQQ-VTTQGLIAAEFTHFDTRTGDPDLHSHVLVSNKVQAPDGR 279 Query: 172 WKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVE-ALGYETEVVGKHG----MWEM 226 W TL S + V+ N + Y L E + +G E + G +WE+ Sbjct: 280 WLTLDS---------QEVFRNAQSISARYDTALMEILSREMGLTFEPSQREGESTPVWEI 330 Query: 227 PGVP---VEAFSGRSQTIR 242 GVP + FS R + R Sbjct: 331 AGVPQYLISLFSSRREQAR 349 >UniRef50_B3CU55 Putative conjugative transfer protein TraA n=26 Tax=Orientia tsutsugamushi str. Ikeda RepID=B3CU55_ORITI Length = 934 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 43/143 (30%), Positives = 73/143 (51%), Gaps = 12/143 (8%) Query: 973 QRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGE 1032 Q+ A R IL ++ V++G AG GK+ V+ + L + +V+GL PTH+AV E Sbjct: 349 QKQALRHILLSTSGVRVLRGRAGTGKS----YVLIKAHKLATNRGQKVIGLAPTHKAVSE 404 Query: 1033 MRSAG-VDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGG 1091 +RS G + T+ FL++ + G +L ++DE+ MVG A + ++ Sbjct: 405 LRSKGYTEVYTVKGFLYNRKKNFMQG-------SLIVVDEAGMVGTKAYAELFRVVRNNN 457 Query: 1092 GRAVASGDTDQLQAIAPGQPFRL 1114 + + +GD QL +I G F + Sbjct: 458 CQLILAGDEKQLASIERGGMFEM 480 >UniRef50_UPI0001AEF487 conjugal transfer relaxase TraA n=1 Tax=Acinetobacter baumannii AB900 RepID=UPI0001AEF487 Length = 958 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 23/208 (11%) Query: 981 LETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLG---PTHRAVGEMRSAG 1037 L ++DR +++ G AG GK+ V+SAV+ + +V G+ T +A+ Sbjct: 357 LTSTDRISLLNGSAGTGKSY----VLSAVSEAYKDSDYQVYGIALQAITAKAIAS--DCD 410 Query: 1038 VDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVAS 1097 + + T+ASFL + SG T+ +LDE+ MVG+ DM + + + Sbjct: 411 IPSSTIASFL----ARYESGNLEINDKTVLILDEAGMVGSRDMQKLLMITEQHNAQLKLV 466 Query: 1098 GDTDQLQAIAPGQPF-RLQQTRSAADVAIMKEIVRQ-TPELREAVYSLINRDVERAL--- 1152 GD+ QL A+ G F +Q+ ++A ++ I RQ T E+R+A L +V++AL Sbjct: 467 GDSYQLNAVMAGSAFNHIQKNLDHKNIATLENIQRQKTTEMRKASEYLSKHEVDKALDIY 526 Query: 1153 SGLESVKPSQ-----VPRQEGAWAPEHS 1175 L VK + + + +W+ +HS Sbjct: 527 QALGKVKACESHEVALAKTIHSWSLDHS 554 >UniRef50_Q9ETQ3 Conjugal transfer protein n=5 Tax=cellular organisms RepID=Q9ETQ3_COREQ Length = 1367 Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 52/173 (30%), Positives = 82/173 (47%), Gaps = 21/173 (12%) Query: 79 GYDLTFSAPKSVSMMAMLGG---DKRLIDAHNQAVDFAVRQVEALASTRVMTDGQSETVL 135 GYDL F+ KS+S++ LG + + +AH QAVD A+ +E G + V Sbjct: 129 GYDLVFTPVKSISLLWGLGDAQVKEAVEEAHKQAVDEALAWIEDEVIYTRRGAGGARKVK 188 Query: 136 TGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDKVGKTGFIENVYANQIA 195 L++A F+H +R +P LHTH+ + N G+W T+ + +Y +A Sbjct: 189 AEGLLIARFDHFDNRVGDPNLHTHSAILNRVLAEGKWTTIDG---------QVLYKANVA 239 Query: 196 FGRLYREKLKEQV-EALGYE-----TEVVGKHGMWEMPGVPV---EAFSGRSQ 239 Y ++ + V LG VGK ++E+ G+PV E FS R+Q Sbjct: 240 ASERYNTRVADLVARKLGVTFAPRPDTAVGKQPVYEVEGIPVGLLEEFSRRAQ 292 >UniRef50_B9QRK8 Ti-type conjugative transfer relaxase TraA, putative n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QRK8_9RHOB Length = 1091 Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 64/194 (32%), Positives = 94/194 (48%), Gaps = 13/194 (6%) Query: 966 MEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGP 1025 ++KL+ QR A I +R V G AG GKTT +M A + E+ +VVG Sbjct: 351 VQKLSDEQRVAIERIT-GEERMASVVGRAGAGKTT----MMKAAREVWEANGYQVVGAAL 405 Query: 1026 THRAV-GEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAY 1084 +A G + AG+ ++TLAS+ QL GE ++F++DE+ MV + M+ Sbjct: 406 AGKAAEGLEKEAGIASRTLASW----QLSWGRGEGLPDKKSVFVIDEAGMVDSRQMSVFV 461 Query: 1085 ALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPE-LREAVYSL 1143 IA G + V GD +QLQ I G FR R+ A + I RQ + +R+A L Sbjct: 462 ETIAKAGAKLVLVGDAEQLQPIEAGAAFRSLTDRTG--YAELGTIYRQREQWMRDASMDL 519 Query: 1144 INRDVERALSGLES 1157 DV A+ +S Sbjct: 520 ARGDVVTAIRAYQS 533 >UniRef50_C8XHE2 TrwC relaxase n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XHE2_NAKMY Length = 1231 Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 56/182 (30%), Positives = 80/182 (43%), Gaps = 25/182 (13%) Query: 79 GYDLTFSAPKSVSMMAMLGG---DKRLIDAHNQAVDFAVRQVEALASTRVMTDGQSETVL 135 G+DLTFS PKSVS + L ++L AH A+ + +E A + V Sbjct: 136 GFDLTFSVPKSVSALWALAPAPVQEQLYLAHRAALAATLELIEGEAVFTRLGHNGVRRVR 195 Query: 136 TGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ-HNGEWKTLSSDKVGKTGFIENVYANQI 194 T LV A F+H SR +PQLHTH VAN Q +G W+TL S ++ + Sbjct: 196 TAGLVAAAFDHWDSRRGDPQLHTHVTVANRVQGPDGRWRTLDS---------ATLHQAAV 246 Query: 195 AFGRLYREKLKEQV-----------EALGYETEVVGKHGMWEMPGVPVEAFSGRSQTIRE 243 A+ Y L +++ E +G+ + +P + AFS RS I Sbjct: 247 AYSETYDLLLADEITRRTGLTWDRRERQAGSNRRIGRE-LAPVPDALIAAFSQRSADIEA 305 Query: 244 AV 245 AV Sbjct: 306 AV 307 >UniRef50_D2S894 TrwC relaxase n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S894_9ACTO Length = 1836 Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 68/222 (30%), Positives = 100/222 (45%), Gaps = 31/222 (13%) Query: 39 EQLGLQGSVDKDVFTRLLEGRLPDGAD-----LSRMQDGSNRHRPGYDLTFSAPKSVSMM 93 E+ ++G V + +FT GR P A L+R + R GYDLTFS KSVS + Sbjct: 144 ERARIRGEVARGMFTEAY-GRPPADARELSGFLARASRLATRAVAGYDLTFSPVKSVSAL 202 Query: 94 AMLGG---DKRLIDAHNQAVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSR 150 L +R+ AH AV + +E A + G + V T L+ A+F H SR Sbjct: 203 WALAPREVAERVETAHAAAVADTLAWLEKHACFTRLGAGGARQVETTGLIAAVFTHRDSR 262 Query: 151 DQEPQLHTHAVVANVTQ-HNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVE 209 +P LHTH V+N Q +G W+ + G+ + NV A++ Y +L+ + Sbjct: 263 AGDPDLHTHVAVSNKVQTDDGRWRAVD----GRVLYKANVAASE-----HYNTRLEAHLV 313 Query: 210 ALGYETEVVGKHGMWEMPGVPVEAFSGRSQTIREAVGEDASL 251 A G + G PG +T+RE VG D+ L Sbjct: 314 A-GLGVHFAERPG--REPG---------KRTVREVVGVDSGL 343 Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust. Identities = 45/148 (30%), Positives = 62/148 (41%), Gaps = 14/148 (9%) Query: 968 KLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTH 1027 +L GQ R + + R + AG GKTT + A + V+GL P+ Sbjct: 576 ELNPGQAQLVRDLAGSGARVQLAVAPAGAGKTTALATLARAWT----AGGGTVLGLAPSA 631 Query: 1028 RAVGEMRSAGVD-AQTLASFLHDTQLQQRSGETPDF-----SNTLFLLDESSMVGNTDMA 1081 A +RSA TLA +G PD+ TL ++DE+ M G ++A Sbjct: 632 VAAAVLRSALAGRCDTLAKL----SWSLDAGTPPDWVAGIGPGTLVVVDEAGMAGTVELA 687 Query: 1082 RAYALIAAGGGRAVASGDTDQLQAIAPG 1109 RA I GG GD QL A+A G Sbjct: 688 RAVEHILRRGGSVRLVGDPQQLTAVAAG 715 Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust. Identities = 46/147 (31%), Positives = 63/147 (42%), Gaps = 28/147 (19%) Query: 1335 DTIRVGTGDRMRFTKSDR-----ERGYVANS-VWTVTAVSGDSV--TLSDGQQTREIRPG 1386 D R G GD + ++DR +V N +TV AV GD + G + R P Sbjct: 828 DGTRAGAGDAVITRRNDRTLPLGASDWVKNGDRFTVHAVGGDGALAVVHTGTKRRLTLPA 887 Query: 1387 QEQAEQHIDLAYAITAHGAQGAS-ETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQV 1445 E H+ L YA T HGAQG + +T L G E +R+L+ YVALSR + + Sbjct: 888 AYVGE-HVRLGYAATVHGAQGVTADTCHTVLTGAE-SRQLL------YVALSRGRSANHL 939 Query: 1446 YTDNRQGWTDAINNAVQKGTAHDVFEP 1472 Y + V G H + P Sbjct: 940 YL-----------STVGDGDPHSIITP 955 >UniRef50_Q58IS3 Putative uncharacterized protein n=2 Tax=Streptomyces RepID=Q58IS3_9ACTO Length = 1379 Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 59/227 (25%), Positives = 104/227 (45%), Gaps = 22/227 (9%) Query: 79 GYDLTFSAPKSVSMMAMLG---GDKRLIDAHNQAVDFAVRQVEALASTRVMT-DGQSETV 134 G+DL PKS S++ L ++ L D +QA RQ+E A V + DG+ + Sbjct: 204 GWDLVLDLPKSDSVLQGLMDALSEQELRDLVHQAKRDTFRQLEKWAGYAVGSKDGEPVRL 263 Query: 135 LTGNLVMALFNHDTSRD------QEPQLHTHAVVANVT-QHNGEWKTLSSDKVGKTGFIE 187 TG L+ H ++R +P LH H +AN+ +G W+++++ + Sbjct: 264 ATGGLLAWSVEHQSARPIRAGEPGDPHLHLHVTIANMALCSDGAWRSIANSG-------Q 316 Query: 188 NVYANQIAFGRLYREKLKE-QVEALGYETEVVGKHGMWEMPGVPVE---AFSGRSQTIRE 243 +++ + A ++ +++ E G E G WE+ GVP E FS R+ + E Sbjct: 317 DLHRHASAADAYFKARVRYLTYERFGVRRERNESTGGWEVRGVPEELRDVFSRRAAIVEE 376 Query: 244 AVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRA 290 G DAS + A+++T++ K VD W + ++ D+ A Sbjct: 377 KAGADASRTEKQAASMETKRDKVDVDATTMRDSWRRRAEQVVGDVDA 423 >UniRef50_C7NLP0 TrwC relaxase n=9 Tax=Actinomycetales RepID=C7NLP0_KYTSD Length = 1184 Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 77/267 (28%), Positives = 113/267 (42%), Gaps = 35/267 (13%) Query: 72 GSNRHRPGYDLTFSAPKSVSMMAMLG--GDKRLI-DAHNQAVD----FAVRQVEALASTR 124 G R G+D TFS PKS S + + G + LI +AH+ AV F R+V A + Sbjct: 134 GRRRAVAGFDFTFSVPKSASALWAVADAGTQALIGEAHHAAVAEVVAFMEREVAATRTGA 193 Query: 125 VMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ--HNGEWKTLSSDKVGK 182 DG V V F+H SR +P LHTH V++N Q +G+W++L Sbjct: 194 TAGDGAVAQVDVTGFVATAFDHFDSRAGDPHLHTHVVISNKVQTAFDGKWRSLDG----- 248 Query: 183 TGFIENVYANQIAFGRLYREKLKEQV-EALGYETEV--VG--KHGMWEMPGVP---VEAF 234 ++A +A L+ + + G E E +G ++ W + VP V+ F Sbjct: 249 ----RPMHAAVVALSELHEAVFADHMTRTFGVEWEARDMGRDRNPAWAISTVPEELVQEF 304 Query: 235 SGRSQTIREAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDA 294 S R++ I DA K+R +A R +Q I TL +A R Sbjct: 305 STRARHI------DAE-KNRLIAEYVARHGRQPSTATIIKLRAQATLATR--PEKAVRSL 355 Query: 295 ADQRADLRTLTPGPASQDGPDVQQAVT 321 AD +D RT G QD + +T Sbjct: 356 ADLTSDWRTRATGVLGQDATGWARTIT 382 >UniRef50_C6RJX0 Putative MobA/MobL protein n=1 Tax=Acinetobacter radioresistens SK82 RepID=C6RJX0_ACIRA Length = 972 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 57/218 (26%), Positives = 105/218 (48%), Gaps = 31/218 (14%) Query: 962 PGELMEKLT------------SGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAV 1009 P L EK T + ++ A L ++DR +++ G AG GK+ V+SAV Sbjct: 326 PFNLTEKFTLNAVKIADKRTFNREQEAAYYTLTSTDRISLLNGSAGTGKSY----VLSAV 381 Query: 1010 NMLPESERPRVVGLG---PTHRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTL 1066 + ++ +V G+ T RA+ + + + T+ASFL + SG + T+ Sbjct: 382 SEAFKTSDYKVHGIALQAITARAISD--DCNIPSSTIASFL----ARYESGNFEINNKTV 435 Query: 1067 FLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPF-RLQQTRSAADVAI 1125 +LDE+ MVG+ DM + ++ + GD+ QL A++ G F +Q ++A Sbjct: 436 LILDEAGMVGSRDMQKLLMIVEKHDAQIKLVGDSYQLSAVSAGSAFAHIQDNLDKKNIAS 495 Query: 1126 MKEIVRQ-----TPELREAVYSLINRDVERALSGLESV 1158 +++I RQ + ++ EA L +V++AL +++ Sbjct: 496 LEDIQRQKYAKESEKMIEASKLLSKHEVDKALDIYKTI 533 >UniRef50_C5EA62 ATP-dependent exoDNAse n=2 Tax=Bifidobacterium longum subsp. infantis RepID=C5EA62_BIFLO Length = 1308 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 61/177 (34%), Positives = 84/177 (47%), Gaps = 21/177 (11%) Query: 79 GYDLTFSAPKSVSMMAMLGGD--KRLID-AHNQAVDFAVRQVEA-LASTRVMTDGQSETV 134 GYDLT + PKSVS++ +R ID +QA D + EA A+TR G + T Sbjct: 141 GYDLTQTVPKSVSILWAFADQDTRRAIDECLHQAADMTIGYFEAEYAATRAGAGGVASTA 200 Query: 135 LTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH--NGEWKTLSSDKV-GKTGFIENVYA 191 G A F+H SRD +P HTH V++N + +G+W L V G T + A Sbjct: 201 CDGVAGFA-FDHWDSRDGDPHPHTHLVISNRVRRTTDGQWTALDGRAVYGATVELSEYNA 259 Query: 192 NQIAFGRLYREKL----KEQVEALGYETEVVGKHGMWEMPGVP---VEAFSGRSQTI 241 N + L ++L E A G T V E+ GVP ++AFSGR + I Sbjct: 260 NLVKD--LLTQRLGWAWHEPARARGRGTRAVAG----EVQGVPEELIDAFSGRDREI 310 >UniRef50_C3JH47 DNA primase catalytic core domain protein n=1 Tax=Rhodococcus erythropolis SK121 RepID=C3JH47_RHOER Length = 1568 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 56/176 (31%), Positives = 90/176 (51%), Gaps = 17/176 (9%) Query: 79 GYDLTFSAPKSVSMMAMLGGDK---RLIDAHNQAVDFAVRQVEALAS-TRVMTDGQSETV 134 GYDL F+ KSVS++ LG D+ + AH AV+ + +E+ A+ TR T G E + Sbjct: 181 GYDLVFTPVKSVSVLWGLGDDEVRTAIEQAHKDAVNETLAWIESEAALTRRGTAG-VEQI 239 Query: 135 LTGNLVMALFNHDTSRDQEPQLHTHAVVAN-VTQHNGEWKTLSSDKVGKTGFIENVYANQ 193 T LV+A F+H +R+ +P LHTH V+N V +G W +L + + + A Sbjct: 240 DTHGLVIAQFDHFDNRNGDPNLHTHCAVSNKVRGIDGNWSSLDARVLHRIAV-----AGA 294 Query: 194 IAFGRLYREKLKEQVEALGYETEVVG--KHGMWEMPGVP---VEAFSGRSQTIREA 244 + R+ +K+ + + +E G K + E+ GVP ++ FS R Q + A Sbjct: 295 ARYNRIVADKISRAL-PVAFEDRSRGENKQPVREIAGVPQELLDGFSRRPQIMERA 349 >UniRef50_Q0ZKG3 Putative uncharacterized protein n=1 Tax=Corynebacterium sp. L2-79-05 RepID=Q0ZKG3_9CORY Length = 1346 Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 71/254 (27%), Positives = 116/254 (45%), Gaps = 44/254 (17%) Query: 66 LSRMQDGSNRHR---PGYDLTFSAPKSVSMMAMLGGD---KRLIDAHNQAVDFAVRQVEA 119 L+ + + NR + G DLTFS KSVS++ LG D + + H QAV+ +++VE Sbjct: 165 LAWLNEKKNRVKQPTSGVDLTFSPAKSVSLVWALGDDETRQTIEKIHQQAVEDTLKEVEE 224 Query: 120 -LASTRVMTDGQSETVLTG-NLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSS 177 TR T G+ E V+ ++ + F H +R +P LHTH +++N Q + L Sbjct: 225 EFLFTR--TGGRGERVIKARGMIASTFMHYDTRAGDPDLHTHCLISNKVQAARGQQGLDD 282 Query: 178 DKVGKTGFIENVY--ANQIAFGRLYREKLKEQVEALGYETEV--------VGKHGMWEMP 227 D+ K ++ Y N G+ Y+ K+ +ALG E ++ GK +WE+ Sbjct: 283 DQADKWRSLDARYLLKNSARIGQRYQVKM---AQALGQELDLEFYERESDEGKAPVWEVA 339 Query: 228 GVPVEAFSGRSQ--------------TIREAVGEDASLKSRD----VAALDTRKSKQHVD 269 G+ E + SQ R G +++R+ A L+TR +K+ Sbjct: 340 GIDEELINSASQRRAGARPVYEEYAEKYRATHGHYPDMRTRNKLWQAAILETRDAKK--- 396 Query: 270 PEIKMAEWMQTLKE 283 P +AE + KE Sbjct: 397 PARSLAEHREEWKE 410 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 22/197 (11%) Query: 933 SRASYEAEKSILRHILE------GKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDR 986 + A+ E E +L + E EAV ++R + L GQ +L T ++ Sbjct: 541 AHATLEEEHKVLASLNELTGYTISDEAVDQALQRNVEKHGFALNDGQAKMAHSLLVTGEK 600 Query: 987 FTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM-RSAGVDAQTLAS 1045 G AG GKT A M+ V ++E +V+GL P+ RA ++ + A + AQTLA+ Sbjct: 601 LACAVGPAGTGKT----ASMAVVADAWKNEGHKVLGLAPSARAAQQLGQDANITAQTLAA 656 Query: 1046 FLHDTQLQQRSGETP-DFSNT--------LFLLDESSMVGNTDMARAYALIAAGGGRAVA 1096 + + + G++P D +N + L+DE+ M D+A + G Sbjct: 657 LTY--RWRGVIGDSPRDINNLGVEINAGDMLLVDEAGMATTADLAALTEIADETGAVIRL 714 Query: 1097 SGDTDQLQAIAPGQPFR 1113 GD QL A+ G FR Sbjct: 715 VGDPHQLDAVETGGLFR 731 >UniRef50_Q1HG56 TraA n=1 Tax=Rhodococcus erythropolis RepID=Q1HG56_RHOER Length = 1506 Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 56/172 (32%), Positives = 81/172 (47%), Gaps = 14/172 (8%) Query: 79 GYDLTFSAPKSVSMMAMLGGD--KRLID-AHNQAVDFAVRQVEALAS-TRVMTDGQSETV 134 G+DL F+ PKSVS M L D +R I+ H++ V + +E A TR Q Sbjct: 196 GFDLVFTPPKSVSTMWALADDDLRRQIERIHHETVKDTLGWIEKEACFTRTGATSQEHQD 255 Query: 135 LTGNLVMALFNHDTSRDQEPQLHTHAV--VANVTQHNGEWKTLSSDKVGKTGFIENVYAN 192 TG +V L++H SR +P LHTHAV V T+ +G+W+ L S + + G + N Sbjct: 256 TTG-VVATLYDHYDSRAGDPNLHTHAVLSVKVCTEKDGKWRALFSSTLHRYGVPASQRYN 314 Query: 193 QIAFGRLYRE---KLKEQVEALGYETEVVGKHGMWEMPGVPVEAFSGRSQTI 241 +L+ E L E+ G + V + E+P E FS R I Sbjct: 315 AAIMSKLHTELGFGLTERSTGRGRQNVV----EIAEVPQQLCEMFSSRRTQI 362 Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust. Identities = 51/208 (24%), Positives = 82/208 (39%), Gaps = 21/208 (10%) Query: 922 VAKGYGTGLLVSRASYEAEKSIL------RHILEGKEAVMPLMERVPGELMEKLTSGQRA 975 + +GT L S + AE+ +L + + + ++E++ L +GQR Sbjct: 538 ILTNHGTALHTSASIITAEQFMLDATRTPTAYIAAQAGLDKVVEKIARTSDHPLNAGQRE 597 Query: 976 ATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM-R 1034 + + V G AG GKTT +AV V+ L P+ A + Sbjct: 598 LAEHFVGSGTLLAVGVGPAGTGKTTSMKAVTDTWRATGHE----VIALAPSAVAAETLGE 653 Query: 1035 SAGVDAQTLASFL--------HDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYAL 1086 V A TLA+ H+ + E P + + L+DE+S+ D+A + Sbjct: 654 EIDVTAHTLATLTYPWRGLEGHEPRSLPEHIEIP--AGAMLLVDEASLASTKDLAAITEI 711 Query: 1087 IAAGGGRAVASGDTDQLQAIAPGQPFRL 1114 AA G GD +QL A+ G RL Sbjct: 712 AAAKGAVVRLLGDPNQLDAVETGGALRL 739 >UniRef50_D1ZVM1 N-terminus not complete (Fragment) n=1 Tax=Sordaria macrospora RepID=D1ZVM1_SORMA Length = 466 Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 47/145 (32%), Positives = 79/145 (54%), Gaps = 15/145 (10%) Query: 1319 ISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAV--SGDSVTLSD 1376 ISP + + + L + I++ GD++R+T++D++RG N + V + SG V SD Sbjct: 226 ISPVDKT-DAMQLAQREQIKLHEGDKIRWTQNDKDRGLNNNDIARVVSADPSGIKVEASD 284 Query: 1377 GQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIAL----EGTEGNRKLMAGFESA 1432 G E++ G E+ I LAYA+ H AQG + AIA+ E N++L Sbjct: 285 GT-LHELKAGDPMMER-ISLAYALNMHAAQGITTDTAIAVMSHRESNLSNQRLFN----- 337 Query: 1433 YVALSRMKQHVQVYTDNRQGWTDAI 1457 V ++R++ +Q++TD+R+ T AI Sbjct: 338 -VTVTRVRDDIQLFTDDREKLTAAI 361 >UniRef50_A8GX52 Conjugal transfer protein TraA n=53 Tax=cellular organisms RepID=A8GX52_RICB8 Length = 1383 Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 84/185 (45%), Gaps = 19/185 (10%) Query: 930 LLVSRASYEAEKSI-LRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFT 988 L + R +Y+ I +I++ K A+ L + QR + + IL + Sbjct: 313 LRLLRIAYKVNNQIHFNNIIKLKSAIDNLAS---------VNEAQRESLQHILINNQGIR 363 Query: 989 VVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGV-DAQTLASFL 1047 ++QG AG GK+ V+ + + ++GL PTH+A E++S G T+ FL Sbjct: 364 ILQGRAGTGKSQ----VLVQAYKIATNHGQNIIGLSPTHKAASELKSKGYRQCYTVKGFL 419 Query: 1048 HDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIA 1107 +L + P N+L ++DE+ MVGN+D + + + +GD QL ++ Sbjct: 420 F--KLYNGKADLP--RNSLLVVDEAGMVGNSDYLELLKVARSNNCNLILAGDERQLTSVE 475 Query: 1108 PGQPF 1112 G F Sbjct: 476 RGGMF 480 >UniRef50_C5SL18 Ti-type conjugative transfer relaxase TraA n=2 Tax=Proteobacteria RepID=C5SL18_9CAUL Length = 1074 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 51/147 (34%), Positives = 79/147 (53%), Gaps = 12/147 (8%) Query: 969 LTSGQRAATRMILETSD-RFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTH 1027 ++ Q+ A R I T D + VV G+AG GK+T ++SA E++ V G Sbjct: 383 MSDEQKDAVRHI--TGDAQIAVVVGFAGAGKST----LLSAAKEAWEAQGYTVHGAALAG 436 Query: 1028 RAVGEMR-SAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYAL 1086 +AVG + SAG++ +TLAS+ DT+ + + E + ++DE+ M+G+ M R + Sbjct: 437 KAVGGLEESAGIEGRTLASW--DTRWKMGTSELG--PGDVLVIDEAGMIGSRQMDRFVSE 492 Query: 1087 IAAGGGRAVASGDTDQLQAIAPGQPFR 1113 G + V GD +QLQAI G PFR Sbjct: 493 AERTGAKLVLVGDHEQLQAIGAGAPFR 519 >UniRef50_C8NSP3 Putative uncharacterized protein n=3 Tax=Corynebacterium RepID=C8NSP3_COREF Length = 1135 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 61/199 (30%), Positives = 100/199 (50%), Gaps = 20/199 (10%) Query: 79 GYDLTFSAPKSVSMMAMLGGD---KRLID-AHNQAVDFAVRQVEALASTRVMTDGQSETV 134 GYDLTFSAPKSVS++ L G ++++D AH AV A+ +E AS D + Sbjct: 106 GYDLTFSAPKSVSVLWGLSGRDEVRQVVDEAHAMAVARALDYLETHASYTRRRDENKTLI 165 Query: 135 L--TGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDKVGKTGFIENVYAN 192 + T L + H TSR +P +H+H ++AN + L D ++ +++Y Sbjct: 166 VDKTVGLSGVKYEHRTSRAGDPHVHSHVLLAN--------RQLCPDGQVRSVDGKSLYHE 217 Query: 193 QIAFGRLYREKLKEQV-EALGYETEVVGKHGMWEMPGVP----VEAFSGRSQTIREAVGE 247 A G LY+ L+E++ LG E V K G ++ G+ + AFS R+ I + E Sbjct: 218 ARAAGMLYQAVLREELTRQLGVEWGEVTK-GQADIKGLNDPAVLTAFSTRTTEIGQWEAE 276 Query: 248 DASLKSRDVAALDTRKSKQ 266 +A + + + +K++Q Sbjct: 277 NALTTNYQLQRVAQKKTRQ 295 >UniRef50_C7M3D6 TrwC relaxase n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M3D6_ACIFD Length = 669 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 59/189 (31%), Positives = 89/189 (47%), Gaps = 19/189 (10%) Query: 81 DLTFSAPKSVSMMAMLGGD---KRLIDAHNQAVDFAVRQVEALASTRVMTDGQSETVLTG 137 DLT +APK VS++ L + + + +AH AV V +E L RV+ DG E V Sbjct: 61 DLTIAAPKDVSVVWGLAAEPFAEAVAEAHRGAVADVVTWLERLDLARVV-DG--EAVPAS 117 Query: 138 NLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDKVGKTGFIENVYANQIAFG 197 + +H SR EP LHTH V+AN + G+ L ++ + + G Sbjct: 118 GVRGVGAHHRLSRAGEPHLHTHVVLANAIEVGGQVAPLDHGRLRRV-------LPALELG 170 Query: 198 RLYREKLKEQVEALGYETEVVGKHGMWEMPGVP---VEAFSGRSQTIREAVGEDASLKSR 254 YR +L ++ LG + G G W + G+ +AFS R + G AS ++R Sbjct: 171 --YRVELAARLRRLGLVVDGDGL-GRWAVRGLDRRVADAFSTRRSEVLAQAGSTASARAR 227 Query: 255 DVAALDTRK 263 VAAL +R+ Sbjct: 228 QVAALASRR 236 >UniRef50_B9Z717 Putative uncharacterized protein n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z717_9NEIS Length = 701 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 55/161 (34%), Positives = 83/161 (51%), Gaps = 16/161 (9%) Query: 979 MILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA-G 1037 +++ T+ F+V+ G AGVGKTT R V+ L +VV + RA M A G Sbjct: 336 VLMATTKPFSVLTGGAGVGKTTVLRVVIDIAKRL----ELKVVQMALAGRAAKRMAEATG 391 Query: 1038 VDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALI--AAGGGRAV 1095 A T+A FLH Q + G+ ++TL ++DE+SM+ D+ A+ ++ G R + Sbjct: 392 HTAMTIAKFLH----QAKEGQLEVSADTLVIVDEASML---DLPTAFRILRYLPDGARLL 444 Query: 1096 ASGDTDQLQAIAPGQPF-RLQQTRSAADVAIMKEIVRQTPE 1135 GD QL I G F RL Q+ + V +M ++ RQT E Sbjct: 445 LVGDPAQLPPIGFGLVFHRLVQSPNVPLVELM-QVHRQTAE 484 >UniRef50_B9BFK7 MobA/MobL protein n=1 Tax=Burkholderia multivorans CGD1 RepID=B9BFK7_9BURK Length = 579 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 56/196 (28%), Positives = 92/196 (46%), Gaps = 13/196 (6%) Query: 962 PGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVV 1021 P + K +GQ A + L + RF +V G AG GK+ +A A+ E++ RV+ Sbjct: 344 PLRMSRKFNAGQDEAFSL-LTSGRRFAIVNGAAGTGKSYVLKAAREAL----EADGFRVI 398 Query: 1022 GLGPTHRAVGEM-RSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDM 1080 G + +M R +G+ ++TL S L L + S + D T+ +DE+ MVG+ M Sbjct: 399 GAALQGKTADDMERDSGIRSRTLHSLL--GSLDKGSLKLDD--KTIVFVDEAGMVGSRQM 454 Query: 1081 ARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRL--QQTRSAADVAIMKEIVRQTPEL-R 1137 + + G GD Q+ A+ G FR + S +A + EI RQ E R Sbjct: 455 EKLLEHVERSGALIRMVGDAYQIHAVDAGDAFRAVSKMAESVGALASLTEIKRQKEEWQR 514 Query: 1138 EAVYSLINRDVERALS 1153 +A +L ++ A++ Sbjct: 515 QASEALSRHEISAAIT 530 >UniRef50_D2L9I1 MobA/MobL protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L9I1_9DELT Length = 945 Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 84/318 (26%), Positives = 136/318 (42%), Gaps = 51/318 (16%) Query: 883 SMVDLLTEAKSFAAEGTGFTELGGEINAQIKRG---DLLYVDVAK--------------- 924 ++V+ T + A FTE E+NA +K+ D++ + AK Sbjct: 274 ALVEPKTILEKLTARQCLFTER--ELNAVLKKAGVEDMIEREAAKQRVLSCPECVKLYDG 331 Query: 925 -GYGTGLLVSRASYEAEKSIL----RHILEGKEAVMPLMERVPGELMEK--LTSGQRAAT 977 G TGL S E++IL R + EG V ER + + + L QR A Sbjct: 332 QGQETGLYTSTLVRAEERAILELTDRKMREGGGHVS---ERARQQALSRKTLDPEQREAF 388 Query: 978 RMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAG 1037 ++ ++R V+QG AG GK+ M A E + RVVGL PT+ +M + G Sbjct: 389 D-VMTAANRLCVIQGRAGAGKSY----TMGAARDAFEVDGWRVVGLAPTNTVSRDMHTDG 443 Query: 1038 VDAQTLASFLHDTQLQQRSGETPDFS-------NTLFLLDESSMVGNTDMARAYALIAAG 1090 AS +H L+Q T S T+ +DE++M+ N M R Sbjct: 444 FQE---ASTVHAELLRQEKARTNPRSRVKAWDRKTVVFVDEAAMLDNRTMHRLLQQADVS 500 Query: 1091 GGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPE-LREAVYSLINRDVE 1149 G + V GD QL +I G + + R D A++ + RQ + +R+A L + ++ Sbjct: 501 GAKVVMIGDDAQLASIQRGGMY--TEIRQKTDSALISLVRRQKQDWMRQASMDLADGKIK 558 Query: 1150 RALSGLE---SVKPSQVP 1164 A++ + +K ++ P Sbjct: 559 EAMTAYQEHDCIKAAKEP 576 >UniRef50_B7KWK3 Helicase, RecD/TraA family n=16 Tax=Bacteria RepID=B7KWK3_METC4 Length = 750 Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 78/287 (27%), Positives = 125/287 (43%), Gaps = 40/287 (13%) Query: 869 HLALPVVESKKLAFSMVDLLTE-AKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYG 927 H ALPV +LA ++++ +S AE +I+RGD + D+ Sbjct: 247 HCALPVARLTELAQKLLEVEAPLIRSAVAE-------------EIERGDEVIQDIIGDQA 293 Query: 928 TGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELM--------EKLTSGQRAATRM 979 L R + AE+ I ++E P E G+ + + L+ Q A R+ Sbjct: 294 CVFL--RGLHAAERGIADRLIERASGTPPWSEIDLGKALPWVEQKTGKALSPSQAEAVRL 351 Query: 980 ILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM-RSAGV 1038 +L + + V+ G GVGKT+ +V+ + +++ V+ PT RA M G+ Sbjct: 352 LL--ASKLCVITGGPGVGKTSTLDSVLRIL----QAKGVHVLLAAPTGRAAKRMTEQTGL 405 Query: 1039 DAQTLASFLHDTQLQ---QRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRA- 1094 +A+T+ L R E+P + L ++DE+SMV D+ AL+ A RA Sbjct: 406 EAKTIHRLLEIDPKHGGFTRDEESP-LNCDLLVIDETSMV---DVPLMNALLKAVPPRAG 461 Query: 1095 -VASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAV 1140 + GD DQL ++ PGQ VA + E+ RQ E R V Sbjct: 462 LLLVGDVDQLPSVGPGQVLADVIASERVPVARLTEVFRQAAESRIIV 508 >UniRef50_Q8RMJ7 TraA n=3 Tax=Corynebacterium RepID=Q8RMJ7_CORDI Length = 1116 Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 83/307 (27%), Positives = 142/307 (46%), Gaps = 69/307 (22%) Query: 78 PGYDLTFSAPKSVSMMAMLGGD---KRLID-AHNQAVDFAV-----------RQVEALAS 122 PG+DLTF APKSVS++ +G D + ++D AH AV A+ +QV+ A Sbjct: 91 PGFDLTFCAPKSVSLLWGMGADSDVRGIVDEAHQAAVSQALDYLSEHAGYTRKQVKEPAG 150 Query: 123 TRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDKVGK 182 R++ + L G + + H TSR +P +H+H ++AN K L D GK Sbjct: 151 KRLVVEK-----LAG-ISGVKYEHRTSRAGDPHVHSHVLLAN--------KQLCRD--GK 194 Query: 183 TGFIENV--YANQIAFGRLYREKLKEQV-EALGYET-EVVGKHGMWEMPGVP----VEAF 234 ++ V Y A G +Y+ ++E + + LG E +VV +G E+ G+ + ++ Sbjct: 195 VRTLDGVSLYHEARAAGMVYQATVREILSQKLGVEFGDVV--NGCAEIVGLDDPELIASY 252 Query: 235 SGRSQTIREAVGEDASLKSRD----VAALDTRKSKQHVDP--EIKMAEWMQTLKETGFDI 288 S R++ I + D L++R +A TR++K P E+++ EW + E G + Sbjct: 253 STRAREIDQWQA-DNGLETRAAYERIAQKITRRTKDTDTPLEELEI-EWARA--EHGAQV 308 Query: 289 RAY------RDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLAR 342 R + ++ AD R P P +Q +A ++ + FT DV + Sbjct: 309 REFVAGLEPKNEADARESSEDFLPKP------------SQILAEVAAERSTFTRADVAEK 356 Query: 343 TVGILPP 349 ++ P Sbjct: 357 VAELIRP 363 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 9/170 (5%) Query: 968 KLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTH 1027 +L+ Q A R ++ + +VV AG GKT+ ++ A NM + V+GL PT Sbjct: 445 ELSPAQADAMRAVVGSDYLASVVVAPAGAGKTSSLKSAHHAWNMAGK----HVIGLAPTG 500 Query: 1028 RAVGEMRSAGV--DAQTLA-SFL-HDTQLQQRSGETPDFS-NTLFLLDESSMVGNTDMAR 1082 +A M V ++ T+A +F+ D + + + ++ +T+ ++DE+ MV N D R Sbjct: 501 KAADVMVGENVADESMTIARAFVGTDDLIPEHTAVKLGWNRDTVVVVDEAGMVSNPDTIR 560 Query: 1083 AYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQ 1132 A G R V GD +Q A+ + D ++E+ RQ Sbjct: 561 VLETATAAGARVVFVGDPEQYSAVKARSGLLATLSHELPDAVELREVFRQ 610 >UniRef50_C4DRT0 TrwC relaxase n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DRT0_9ACTO Length = 1623 Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 56/173 (32%), Positives = 87/173 (50%), Gaps = 24/173 (13%) Query: 79 GYDLTFSAPKSVSMMAMLGGDKRLID----AHNQAVDFAVRQVEALAS-TRVMTDGQSET 133 G+DL F+ KS +++ L D R+ AH+ AVD + +E A+ TR T G ++ Sbjct: 166 GFDLVFAPVKSAALVWALHPDVRVRQQVKAAHDAAVDSVMELLEEHAAHTRAGTGGVAQ- 224 Query: 134 VLTGNLVMALFNHDTSRDQEPQLHTHAVVAN-VTQHNGEWKTLSSDKVGKTGFIENVYAN 192 + T L+ A F+H SR +P LHTH VAN V +G+W++L + +YA Sbjct: 225 LDTKGLIAARFDHFDSRAGDPNLHTHIPVANKVLGRDGKWRSLDA---------RGIYAM 275 Query: 193 QIAFGRLYREKLK-EQVEALGY---ETEVVG-KHGMWEMPGVP---VEAFSGR 237 +A Y + + E V LG + E G K + E+ G+P ++ FS R Sbjct: 276 TVAASEHYNTRFETEMVHRLGVTFTDREAAGSKRPVREIDGIPAAMIKHFSRR 328 >UniRef50_Q3B2W0 Helicase RecD/TraA n=19 Tax=Bacteria RepID=Q3B2W0_PELLD Length = 739 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 60/191 (31%), Positives = 85/191 (44%), Gaps = 18/191 (9%) Query: 968 KLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTH 1027 +L+ QR A R+ L S++ ++ G GVGKTT R ++S +PE +V+ PT Sbjct: 340 ELSVSQREAVRLAL--SNKLLIITGGPGVGKTTIIRTLLS----IPEVFGLKVLLTAPTG 393 Query: 1028 RAVGEMRSA----GVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARA 1083 RA + A G L F T +RS P L ++DE+SM+ M R Sbjct: 394 RAAKRLSEATGREGRTIHRLLEFDPATFDFKRSAHNP-LEADLVIVDEASMIDVVLMNRL 452 Query: 1084 YALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSL 1143 I +A GD DQL + PG L S+ V +VR T R+A SL Sbjct: 453 LPAIPKNAALILA-GDVDQLPPVGPGAV--LSDLISSGTV----RVVRLTEIFRQAATSL 505 Query: 1144 INRDVERALSG 1154 I ++ R G Sbjct: 506 IIQNAHRVNRG 516 >UniRef50_Q27I75 PSQ10.13 n=1 Tax=Nocardiopsis sp. 90127 RepID=Q27I75_9ACTO Length = 694 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 62/204 (30%), Positives = 93/204 (45%), Gaps = 26/204 (12%) Query: 79 GYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQV-----EALASTRVMTDGQSET 133 G+DLT APKSVS++ L GD A A AVRQ E +A + G+ T Sbjct: 200 GWDLTLDAPKSVSVLYAL-GDPATAAAVENAYLTAVRQTVATVEEWVAHGQRGEHGRGRT 258 Query: 134 ---VLTGNLVMALFNHDTSR----DQEPQLHTHAVVANVTQH-NGEWKTLSSDKVGKTGF 185 + T L+ L H ++R + +P LH H +++N+ Q +G+W +++ Sbjct: 259 ARRIETSGLLATLTLHTSARPVNGEADPHLHAHIMISNLAQGVDGKWSGIAAGG------ 312 Query: 186 IENVYANQIAFGRLYREKLKEQV-EALGYETEVVGKHGMWEMPGVPVEA---FSGRSQTI 241 +Y A G L R L+ Q+ LG V K G WE+ G+ + +S R Sbjct: 313 -RELYTAVPAIGELMRANLRTQLARDLGVRW-VEEKPGQWEVAGIGPQVRDLYSRRRDQA 370 Query: 242 REAVGEDASLKSRDVAALDTRKSK 265 + G+ AS R +AA T SK Sbjct: 371 LKRAGKGASPAQRRLAARRTVTSK 394 >UniRef50_P55418 Probable conjugal transfer protein traA n=16 Tax=Rhizobiaceae RepID=TRAA_RHISN Length = 1102 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 71/263 (26%), Positives = 107/263 (40%), Gaps = 53/263 (20%) Query: 984 SDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAV-GEMRSAGVDAQT 1042 ++R V G AG GKTT +A A E+ RVVG +A G + AG+ ++T Sbjct: 396 AERIAAVIGRAGAGKTTMMKAAREAW----EAAGYRVVGGALAGKAAEGLEKEAGIASRT 451 Query: 1043 LASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQ 1102 L+S+ +L+ G T+F+LDE+ MV + MA G + V GD +Q Sbjct: 452 LSSW----ELRWNEGRKQLDDKTIFVLDEAGMVSSRQMALFVETATKAGAKLVLVGDPEQ 507 Query: 1103 LQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQ 1162 LQ I G F R+ AD E+ E +Y Sbjct: 508 LQPIEAGAAF-----RAIADRIGYAEL--------ETIY--------------------- 533 Query: 1163 VPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKA--MLKGEAFPDVPMTLYEAIVRDYTGRT 1220 RQ W + S+ + + K+ + + M++ E + L RDY Sbjct: 534 --RQREQWMCDASL-DLARGNVGKVVDTYRANGRMMRSELKAEAVQNLIADWDRDY---- 586 Query: 1221 PEAREQTLIVTHLNEDRRVLNSM 1243 + + TLI+ HL D R+LN M Sbjct: 587 -DPTKTTLILAHLRRDVRMLNQM 608 >UniRef50_C4XNH4 Conjugal transfer protein TraA n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XNH4_DESMR Length = 947 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 64/234 (27%), Positives = 104/234 (44%), Gaps = 16/234 (6%) Query: 908 INAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRH---ILEGKEAVMPLMERVPGE 964 + A +K + + + A G + SR E +IL + ILEGK R Sbjct: 293 VEAILKNAECVPLFNAFGEEANVYTSRKVRAEEAAILGNVGKILEGKGGAASAKSRAAAL 352 Query: 965 LMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLG 1024 + L + QR A ++ +R V+QG AG GK+ A A E++ RVVGL Sbjct: 353 ASKTLDTEQREAFD-VMTAENRLCVIQGRAGAGKSYTMGAAREAF----EADGWRVVGLA 407 Query: 1025 PTHRAVGEMRSAGVDAQTLASFLHDTQLQQ---RSGETPDFSNTLFLLDESSMVGNTDMA 1081 PT+ +M G AS LH L+Q + P T+ +DE++M+ N+ + Sbjct: 408 PTNAVSRDMAKDGFKE---ASTLHSELLKQENPKKKTVPWDETTVVFVDEAAMMDNSILL 464 Query: 1082 RAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPE 1135 R G + V GD QL ++ G + +TR++ +++ ++ RQ E Sbjct: 465 RLTDHAERTGAKLVLIGDDAQLSSVQRGGMYSEIRTRTSE--SLISQVRRQKEE 516 >UniRef50_B3GW66 TraA Protein n=3 Tax=Corynebacterium RepID=B3GW66_9CORY Length = 1492 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 31/186 (16%) Query: 69 MQDGSNRHRPGYDLTFSAPKSVSMMAMLGGD---KRLIDAHNQAVDFAVRQVE-ALASTR 124 ++D + G+DLTFS KSVS++ L + +R+ H+QAV A+ E + TR Sbjct: 166 LKDNVRQSVSGFDLTFSPAKSVSVVWALSDEETARRIEKLHHQAVKEAMAWAEDNVFFTR 225 Query: 125 VMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ-HNGEWKTLSSDKVGKT 183 G+ E V T ++ + F H +R +P LH+H +V+N Q +G W +L S + K Sbjct: 226 SGKQGR-EQVKTKGVIASEFKHYDTRAGDPDLHSHVLVSNKVQAEDGRWLSLDSKALHKQ 284 Query: 184 G---------FIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP---V 231 + + +N + + R+ V K WE+ GV + Sbjct: 285 AQAISHRYDSILNTLLSNDMGYSFTARD-------------HGVNKEPTWEIEGVSESLM 331 Query: 232 EAFSGR 237 E+FS R Sbjct: 332 ESFSKR 337 >UniRef50_A8QYS1 TraA protein n=1 Tax=Fluoribacter dumoffii RepID=A8QYS1_9GAMM Length = 889 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 91/370 (24%), Positives = 154/370 (41%), Gaps = 73/370 (19%) Query: 957 LMERVPGELMEK----------LTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVM 1006 L R+ E+ EK L+ Q +A + ++ D +++ GYAG GK+ ++ Sbjct: 315 LHHRLGHEVCEKTVLLAQSSRTLSEEQESALCYLTQSGDLKSLL-GYAGTGKSY----LL 369 Query: 1007 SAVNMLPESERPRVVGLGPTHRAVGEMR-SAGVDAQTLASFLHDTQLQQRSGETPDFSNT 1065 A + E RV G + A +R S+G++++T+AS + G S Sbjct: 370 GAAREIWEQSGYRVHGAALSGIAALNLRDSSGIESRTIASLFYRLD----KGMFHFTSRD 425 Query: 1066 LFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAI 1125 + ++DE+ M+G+ M R +A G + V GD QLQAI G FR Sbjct: 426 ILVVDEAGMLGSRTMERLTREVAQAGAKLVLVGDWQQLQAIEAGASFR--AIAENYQYVE 483 Query: 1126 MKEIVRQ-TPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQE 1184 + +I RQ TP +A L V++AL + A +H V F + + Sbjct: 484 LNQIRRQTTPWQVDASLDLAQGAVDKALLAYD--------------AHDH-VHRFISTHD 528 Query: 1185 AKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMI 1244 AK A +Q + DV R + +I+ + +D + LN M Sbjct: 529 AKHALIEQ--------WNDV--------------RIASPSDSQIILAYTRKDVKELNEMA 566 Query: 1245 HDVREKAGELGKEQVMVPVLNTANIRDGELRRLST-----WETHRDALVLVDNVYHRIAG 1299 ++ K G+LG++ V N+ GE R + + D+L +++ I G Sbjct: 567 RVMKRKDGQLGEDVVF-------NMERGE-RAFAVNDRVYFLKREDSLSVINGTLGTIQG 618 Query: 1300 ISKDDGLITL 1309 I+ G+IT+ Sbjct: 619 INAKSGIITV 628 >UniRef50_A1SIX0 DNA primase catalytic core, N-terminal domain n=3 Tax=Nocardioides sp. JS614 RepID=A1SIX0_NOCSJ Length = 1976 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 68/216 (31%), Positives = 92/216 (42%), Gaps = 38/216 (17%) Query: 52 FTRLLEGRLPDGADLSRMQDGSNRH-RP------GYDLTFSAPKSVSMMAMLGGDKR--- 101 F R GR P AD + +H RP GYDLTFS KSVS++ + K Sbjct: 163 FFRAEHGREP--ADARELAAAIAKHSRPKTNAVAGYDLTFSPVKSVSVLWAISDPKTAAV 220 Query: 102 LIDAHNQAVDFAVRQVEALA-STRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHA 160 + AH A+ A+ +E+ A TR T+G + + G LV F H SR +P LHTH Sbjct: 221 IERAHQAAIKDALGFIESKALFTRRGTNGVRQVDVRG-LVATAFTHRDSRAGDPDLHTHV 279 Query: 161 VVANVTQH-NGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQ-VEALGYETEVV 218 VAN Q +G+W + + K ++ Y L+ V+ALG E Sbjct: 280 AVANKVQTLDGKWLAIDGRPLHKA---------VVSASETYNTALERHLVDALGVRFE-- 328 Query: 219 GKHGMWEMPGVPVEAFSGRSQTIREAVGEDASLKSR 254 E P R + +RE VG D L R Sbjct: 329 ------ERPNE-----DARKRPVREIVGVDPELNRR 353 Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust. Identities = 53/171 (30%), Positives = 75/171 (43%), Gaps = 15/171 (8%) Query: 969 LTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHR 1028 L +GQ R + +S R + AG GKTT RA+ SA ++GL P+ Sbjct: 583 LNAGQATLVREMATSSARLQLAIAPAGSGKTTAMRALASAW----ADGGGTIIGLAPSAA 638 Query: 1029 AVGEMRSAGVDAQT--LASFLHDTQLQQRSGET-PDF-----SNTLFLLDESSMVGNTDM 1080 A +RS +D QT LA H + + SG P + S+TL ++DE+ M + Sbjct: 639 AADALRSQ-IDTQTDTLAKLTHSLEQARESGAAMPAWVARIDSSTLVVIDEAGMADTLSL 697 Query: 1081 ARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVR 1131 A + I GG GD QL AI G R R+ + E+VR Sbjct: 698 DAAVSYILERGGSVRLIGDDQQLSAIGAGGVLR--DIRATHGALQLTELVR 746 >UniRef50_C2AI56 TrwC relaxase n=1 Tax=Tsukamurella paurometabola DSM 20162 RepID=C2AI56_TSUPA Length = 948 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 23/177 (12%) Query: 79 GYDLTFSAPKSVSMMAMLGGDK---RLIDAHNQAVDFAVRQVEALASTRVMTDGQSETVL 135 GYDLTF+ KSVS+M L + ++ AH AV A+ +E A + + Sbjct: 185 GYDLTFTPVKSVSVMWALADPETRAKIETAHQAAVGDALSWLEDNAVFTKRGARGEQQLS 244 Query: 136 TGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDKVGKTGFIENV--YANQ 193 T L +A F+H +R +P LHTH V+N K L SD G+ G I ++ + N Sbjct: 245 TAGLTVAQFDHYDTRAGDPNLHTHCAVSN--------KVLGSD--GRWGAINSLPFFNNA 294 Query: 194 IAFGRLYREKLKEQVEA-LGYETEV----VGKHGMWEMPGVP---VEAFSGRSQTIR 242 +A + Y L E + A LG E GK + E+ G+ ++ FS R +R Sbjct: 295 VAASQRYNAVLAETLRAELGVEFVARQVGRGKQPIMEIAGIDTALLDGFSTRRAQVR 351 >UniRef50_B0P898 Putative uncharacterized protein n=3 Tax=Bacteria RepID=B0P898_9FIRM Length = 757 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 12/188 (6%) Query: 952 EAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNM 1011 E + P++E+V E+ +L++ Q AA +V+ G G GKTT R ++ Sbjct: 320 EHIAPVLEQVKVEMGLRLSAQQEAAVYAAFRHG--LSVITGSPGTGKTTVLRTILEVYRR 377 Query: 1012 L-PESERPRVVGLGPTHRAVGEM-RSAGV-DAQTLASFLHDTQLQ---QRSGETPDFSNT 1065 L P+ ++ + PT RA M S G DA+TL S L T + R+ ++ S Sbjct: 378 LHPDG---KIALMAPTGRASRRMSESTGFEDARTLHSGLGLTSEEDEGSRNRKSEPLSAD 434 Query: 1066 LFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAI 1125 L ++DE SMV + +A + R V GD DQL ++ G FR V + Sbjct: 435 LIIVDEFSMV-DMWLAEKFFERMKANARIVLVGDPDQLPSVGAGNVFREIIETQIVPVTV 493 Query: 1126 MKEIVRQT 1133 + +I RQ+ Sbjct: 494 LDQIFRQS 501 >UniRef50_B8KYV8 Putative trwC protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8KYV8_9GAMM Length = 975 Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 72/301 (23%), Positives = 124/301 (41%), Gaps = 42/301 (13%) Query: 968 KLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTH 1027 +L+ Q A I S + G AG GKTT A+ ESE ++G+ ++ Sbjct: 469 QLSQEQLVAVNHICRGSGGVANLSGLAGTGKTTISELYKEAL----ESEGMVLLGVCVSN 524 Query: 1028 RAVGEMR-SAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYAL 1086 +A ++ +G+ + ++A LHD +R + N + ++DE+ MV D A Sbjct: 525 KAAQKLEGESGMPSVSMAQMLHDLAEGKRELQ----PNDVLVIDEAGMVDTRDTRALLAY 580 Query: 1087 IAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINR 1146 + + GD +QLQ I G F+L T+ A + EI RQ + Sbjct: 581 AEKAKSKVILQGDAEQLQPIGAGSGFQL--TKQAVGDVKLTEIRRQARQ----------E 628 Query: 1147 DVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKL------AEAQQKAMLKGEA 1200 D E A+ + +V + E Q+ +L A +Q+K + Sbjct: 629 DRETAMGFYAKNENGEVVDLKKGTRSRRETLELGDEQKERLMDSIVEAHSQEKCI----- 683 Query: 1201 FPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVM 1260 E +V DY + P A + L++ H + LN+ I ++ GE+G ++V+ Sbjct: 684 ---------ERLVNDYF-KNPAALDDKLVLAHSRAEVGALNAGIRKGLKERGEIGTDEVV 733 Query: 1261 V 1261 V Sbjct: 734 V 734 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 83/316 (26%), Positives = 128/316 (40%), Gaps = 59/316 (18%) Query: 16 YYTDKDNYYVLGSMGERWAGRGAEQLGLQGS-VDKDVFTRLLEGRLPD-GADLSRMQDGS 73 YY DKD +M W G+ A L L + V ++ ++L EG P G L + Sbjct: 29 YYLDKDGN-AQDTMA--WGGKMAAHLNLLSTAVTRESMSKLAEGFDPQTGRALCQNAGQK 85 Query: 74 NRHRP--------------------------GYDLTFSAPKSVSMM-AMLGGDKR--LID 104 + RP GYD+T SAPK V ++ AM ++R ++ Sbjct: 86 GKVRPKVDKNGDPVLDAQGKPEVVVVGGHRVGYDVTVSAPKDVGILFAMESPERRDAVLK 145 Query: 105 AHNQAVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVAN 164 AH A A+ ++E + TR G+ + G LV + H RD + LHTH +V Sbjct: 146 AHQAASAEAMNRLEQMVETRRGKGGKDVIGVKG-LVWSSHQHFAGRDLDMDLHTHHLVYG 204 Query: 165 VTQHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVV------ 218 V L +D T +Y + A +Y+ +L + ++ LGY+ E V Sbjct: 205 V--------ALGADGKESTFDAVEIYRHARAMDEIYKLELYKNLQGLGYQVEHVRELDDD 256 Query: 219 GKH---GMWEMPGVP---VEAFSGRSQTIREAVGEDASLKSRDVAALDTRKSKQHVDPEI 272 GK + G+ ++ FS R + + E + S A TRK K Sbjct: 257 GKETNRSYARLAGIDQDVIDHFSKRRKALLEYAEQHGV--STQQANKATRKHKNEPTYTE 314 Query: 273 KMAEWMQTLKETGFDI 288 + W + LK GFD+ Sbjct: 315 LVEHWQEALK--GFDL 328 >UniRef50_A1SH09 DNA primase catalytic core, N-terminal domain n=1 Tax=Nocardioides sp. JS614 RepID=A1SH09_NOCSJ Length = 1797 Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 57/173 (32%), Positives = 78/173 (45%), Gaps = 27/173 (15%) Query: 79 GYDLTFSAPKSVSMMAMLGGDKRLID---AHNQAVDFAVRQVE-ALASTRVMTDGQSETV 134 G+DLTFS KSVS + L + D AH+ AV + +E +A TRV + G + Sbjct: 210 GFDLTFSPVKSVSALWALAPKEVAADIRAAHDAAVVDTLTWLEREVAHTRVGSGGVRQVK 269 Query: 135 LTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ-HNGEWKTLSSDKVGKTGFIENVYANQ 193 + G LV A F H SR +P LHTH V+N Q +G W L +YA + Sbjct: 270 VRG-LVAAAFTHRDSRAGDPDLHTHVAVSNKVQAEDGHWLALDG---------RLLYAAK 319 Query: 194 IAFGRLYREKLK-EQVEALGYE----TEVVGKHGMWEMPGVPVEAFSGRSQTI 241 + Y +++ E V LG E + VG VPV G S T+ Sbjct: 320 VTASEHYNTRVEAELVARLGVEFADRDDTVGGK-------VPVREIRGVSTTL 365 >UniRef50_B9JRK7 Ti-type conjugative transfer relaxase TraA n=9 Tax=Rhizobiales RepID=B9JRK7_AGRVS Length = 1105 Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 49/146 (33%), Positives = 72/146 (49%), Gaps = 10/146 (6%) Query: 969 LTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHR 1028 L+ QR A I + + V G+AG GK+T A A E + RV G + Sbjct: 389 LSDEQRLAVAHITGHA-QIAAVIGFAGAGKSTMLAAARDAW----ERQGYRVHGAALAGK 443 Query: 1029 AV-GEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALI 1087 A G S+G+ ++TLAS+ + Q +G+ + ++DE+ MVG+ +AR Sbjct: 444 AAEGLEESSGIASRTLASWEYGWQ----AGKGQLGKGDVLVIDEAGMVGSRQLARVVMEA 499 Query: 1088 AAGGGRAVASGDTDQLQAIAPGQPFR 1113 A G + V GD +QLQAI G PFR Sbjct: 500 EARGAKLVLVGDHEQLQAIGAGSPFR 525 >UniRef50_Q70K35 Putative TraA protein n=1 Tax=Gordonia westfalica RepID=Q70K35_9ACTO Length = 2072 Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 50/145 (34%), Positives = 73/145 (50%), Gaps = 11/145 (7%) Query: 30 GERWAG--RGAEQLGLQGSVDKDVFTRLLEGRLPDGADLSRMQDGSNRHR----PGYDLT 83 GERW + L+ + ++ FT+ D +LS +R R GYD+T Sbjct: 151 GERWDAVIDDDTRAALRTELGRERFTKTYRRPPRDSRELSGFIAQESRRRQSAVAGYDMT 210 Query: 84 FSAPKSVSMM---AMLGGDKRLIDAHNQAVDFAVRQVEALAS-TRVMTDGQSETVLTGNL 139 FS KSVS + A L +++ AH QAV A+ +E A +R+ TDG ++ V T L Sbjct: 211 FSPVKSVSALWAVAPLPMAEKIEAAHRQAVADALAFIEREACLSRLGTDGIAQ-VDTDGL 269 Query: 140 VMALFNHDTSRDQEPQLHTHAVVAN 164 + A F H SR +P LHTH ++N Sbjct: 270 IAAAFTHRDSRAGDPDLHTHVAISN 294 >UniRef50_C4WLD2 Ti-type conjugative transfer relaxase TraA n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WLD2_9RHIZ Length = 1322 Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 115/483 (23%), Positives = 176/483 (36%), Gaps = 130/483 (26%) Query: 987 FTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAV-GEMRSAGVDAQTLAS 1045 V G AG GK+T +++A + ES RV+G + +A G S+ + ++TLA+ Sbjct: 420 IAAVVGLAGTGKST----LLAAARLAWESGHHRVLGAALSGKAAEGLEESSAIRSRTLAA 475 Query: 1046 FLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQA 1105 + H +G + ++DE+ MV + MAR + G + V GD QLQ Sbjct: 476 WEH----AWNNGRDQLMRGDILVIDEAGMVSSLQMARVLDAVEKAGAKVVLVGDAMQLQP 531 Query: 1106 IAPGQPFRLQQTR-SAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVP 1164 I G FR R S+A++A ++ RQ E L R A GLE Sbjct: 532 IGAGAAFRAISERISSAELAGVR---RQQDEWARDASKLFARGDTAA--GLE-------- 578 Query: 1165 RQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGR----- 1219 +++ L EA+ + L G D + I TGR Sbjct: 579 ---------------IYARRGHLVEAETRDALIGRLVRDWTDARRKLITPSQTGRGVQPG 623 Query: 1220 ----TPEAREQ-----TLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIR 1270 P Q L++ H N D LN + V + G L Sbjct: 624 TGIAAPNGGGQLPGDALLVLAHTNRDVHRLNEALRKVMREEGAL---------------- 667 Query: 1271 DGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVT 1330 DG RR T R+ + D +I L+ N R + PR A G Sbjct: 668 DGA-RRFRTERGMRE--------------FAAGDRIIFLE----NARFLEPR---ARG-- 703 Query: 1331 LYTPDTIR-------VGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREI 1383 P +R V TG+ R + +V SG+ + LS Sbjct: 704 -NRPQYVRNGMFGTVVSTGNAFR------------APLLSVRLDSGNEIVLS-------- 742 Query: 1384 RPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHV 1443 E + ++ID YA+T H +QGA+ + L +R L V+++R + Sbjct: 743 ----EDSYRNIDHGYAVTIHKSQGATVDRTLVLASGMMDRHLTC------VSMTRHRHRA 792 Query: 1444 QVY 1446 +Y Sbjct: 793 DLY 795 >UniRef50_B7L3A3 Ti-type conjugative transfer relaxase TraA n=2 Tax=Methylobacterium extorquens group RepID=B7L3A3_METC4 Length = 1245 Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 83/301 (27%), Positives = 122/301 (40%), Gaps = 56/301 (18%) Query: 968 KLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTH 1027 +L+ QR A R + + R V G+AG GK+T +A + RVVG Sbjct: 376 ELSEEQREAVRHVTGAA-RIAAVVGFAGAGKSTMLGVARAAWSDCGH----RVVGGALAG 430 Query: 1028 RAV-GEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYAL 1086 +A G SAG+ ++TLAS+ +L ++ S +F+LDE+ MV + ++R Sbjct: 431 KAAEGLESSAGIASRTLASW----ELAWKNDRDLLKSGDVFVLDEAGMVASEQLSRIVRE 486 Query: 1087 IAAGGGRAVASGDTDQLQAIAPGQPFR-LQQTRSAADVAIMKEIVRQT-PELREAVYSLI 1144 + G + V GD QLQ I G FR + + A++A EI RQ P +R A + Sbjct: 487 VERRGAKLVLVGDAMQLQPIEAGAGFRAIIEIIGYAELA---EIWRQADPAMRRASVAFA 543 Query: 1145 NRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDV 1204 + AL V R+ G + F+ PD Sbjct: 544 RGETAAALG---------VYRERG-------MVRFT---------------------PDR 566 Query: 1205 PMTLYEAIVR---DYTGRTPEAR-EQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVM 1260 I DY G P+ R +TLI+ N D LN+M D + G L E Sbjct: 567 AAARAALIAAWKPDYLGHKPDGRPSETLILAQTNADVLALNAMARDTLKADGLLSGEARF 626 Query: 1261 V 1261 V Sbjct: 627 V 627 >UniRef50_C7Q5H7 TrwC relaxase n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q5H7_CATAD Length = 1386 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 67/247 (27%), Positives = 112/247 (45%), Gaps = 53/247 (21%) Query: 58 GRLPDGADLSRMQ-DGSNRHRP---GYDLTFSAPKSVSMMAMLGGDKR------LIDAHN 107 GR P A++ ++ + S R R G+DL F+ KS +++ L D+R + +AH Sbjct: 141 GRAPTEAEIKKIHTEESRRARAAVAGFDLVFAPVKSAALVWAL--DERPEVRAAVREAHE 198 Query: 108 QAVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ 167 A D A+ +E A+ G + T LV A F+H SR +P LHTH +++ Q Sbjct: 199 AARDAALEILETHAAYTRTGRGGIAQIETRGLVAARFDHFDSRAGDPNLHTHVAISSKVQ 258 Query: 168 H-NGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGM-W- 224 +G W++L + +Y +A Y + +ETE+ + G+ W Sbjct: 259 GVDGIWRSLDA---------RALYKMTVAVSEFYNTR---------FETELTTRTGVSWT 300 Query: 225 EMPGVPVEAFSGRSQTIREAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTL--- 281 E P +G+ + +RE G D + VA +R++ EI+ A + Q L Sbjct: 301 ERPDT-----TGKREPVREIAGIDPKM----VAHFSSRRT------EIE-ARYEQLLRGF 344 Query: 282 -KETGFD 287 +E G+D Sbjct: 345 RREHGYD 351 Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust. Identities = 36/113 (31%), Positives = 54/113 (47%), Gaps = 8/113 (7%) Query: 1341 TGDRMRFTKSDRERGYVAN-SVWTVTAVSGD-SVTLSDGQQTREIRPGQEQAEQHIDLAY 1398 T D R K R R +V N WTVT D S+T+ + + +R E H++L Y Sbjct: 835 TRDNDRKNKVSRGRDWVKNGDAWTVTKRHRDGSLTVKNIEHQGTVRLSAEYVSAHVELLY 894 Query: 1399 AITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQ 1451 A T + AQG++ A L E +R E+ YV LSR ++ +Y + + Sbjct: 895 ATTTNRAQGSTVDTAHPLITAEMSR------ENLYVILSRAQERTSLYVETHE 941 >UniRef50_C7D7J8 Exodeoxyribonuclease V n=1 Tax=Thalassiobium sp. R2A62 RepID=C7D7J8_9RHOB Length = 639 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 56/183 (30%), Positives = 83/183 (45%), Gaps = 28/183 (15%) Query: 969 LTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHR 1028 LT QR A RM R V+ GYAG GKTT + V L ++ P ++ L + R Sbjct: 256 LTDAQREAVRM--SHRHRLLVLAGYAGSGKTTVLKEVCQTQETLRKT--PLIITL--SGR 309 Query: 1029 AVGEMRSA-GVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALI 1087 A A G A T+A FL ++Q +T NT+ + DE+SM+G ++ R L Sbjct: 310 AAQRANEATGRRAITVARFL----IEQEKSDTLLDENTVLIADEASMLGLVEVWR--ILR 363 Query: 1088 AAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRD 1147 G + GD QL ++PG + +VR P++R+ V ++R Sbjct: 364 RLGDASLILCGDPAQLPPVSPG--------------VVFHALVRH-PDIRKVVLDRVHRQ 408 Query: 1148 VER 1150 ER Sbjct: 409 DER 411 >UniRef50_A5CCM9 Helicase RecD/TraA, ATP-dependent exoDNAse (Exonuclease V) n=2 Tax=Orientia tsutsugamushi RepID=A5CCM9_ORITB Length = 731 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 60/200 (30%), Positives = 89/200 (44%), Gaps = 23/200 (11%) Query: 943 ILRHILEGKEAVMPLMERVPGELME----KLTSGQRAATRMILETSDRFTVVQGYAGVGK 998 +L HI +GK A P+ E + KL+ Q+ A L++ + ++ G GVGK Sbjct: 304 LLVHISKGKLAWNPISSNKITEYISNANIKLSPSQQDALNQALKS--KVMIITGGPGVGK 361 Query: 999 TTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVDAQTLASFLHDTQLQQRSGE 1058 TT ++ +N+L +SE ++ PT RA + A Q A +H + R G+ Sbjct: 362 TTLINSI---INIL-KSEGVVILLAAPTGRAAKRLSEA---TQHPAHTIHRL-VYSRPGQ 413 Query: 1059 ----TPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRA--VASGDTDQLQAIAPGQPF 1112 L +LDE SMV D+ YA I+A A GD DQL ++ PGQ F Sbjct: 414 DVRTITKLKCQLLILDEMSMV---DVTTMYAAISALPSTAALFLVGDIDQLPSVGPGQVF 470 Query: 1113 RLQQTRSAADVAIMKEIVRQ 1132 + + EI RQ Sbjct: 471 SDLIKSQKFPIVTLTEIFRQ 490 >UniRef50_D0LFJ6 TrwC relaxase n=1 Tax=Gordonia bronchialis DSM 43247 RepID=D0LFJ6_GORB4 Length = 2090 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 54/184 (29%), Positives = 85/184 (46%), Gaps = 22/184 (11%) Query: 79 GYDLTFSAPKSVSMM---AMLGGDKRLIDAHNQAVDFAVRQVEALAS-TRVMTDGQSETV 134 GYD+TFS KSVS + A + + DAH AV A+ +E A +R+ T+G ++ V Sbjct: 225 GYDMTFSPVKSVSTLWAIAPIDMASTIEDAHRAAVSDAIAFIEREACYSRLGTNGVAQ-V 283 Query: 135 LTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHN-----GEWKTLSSDKVGKTGFIENV 189 T L+ A F H SR +P LHTH ++N + W L G+ + V Sbjct: 284 DTDGLIAAAFTHRDSRAGDPDLHTHVAISNKVRVRDAAGIARWMALD----GRPLYKATV 339 Query: 190 YANQIAFGRLYREKLKEQVEALGYETEV---VGKHGMWEMPGVP---VEAFSGRSQTIRE 243 A+++ RL E Q + + + K + E+ G+P ++ +S R + I Sbjct: 340 SASEVYNSRL--ELYLHQSLGVTFSERAQPDLRKRAVREIDGIPTDLMQRWSSRREAIEA 397 Query: 244 AVGE 247 V E Sbjct: 398 RVAE 401 >UniRef50_Q3ZWH7 Atp-dependent exodnase, exonuclease v n=1 Tax=Dehalococcoides sp. CBDB1 RepID=Q3ZWH7_DEHSC Length = 1423 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 46/137 (33%), Positives = 71/137 (51%), Gaps = 21/137 (15%) Query: 986 RFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVDAQTLAS 1045 RF+V+ G AG GKTT V+ + LPE + V+ L PT +A ++ G+ A+TLA Sbjct: 640 RFSVMVGPAGTGKTT----VLDILCNLPEIKSKGVLKLAPTGKARVKL---GLGAKTLAQ 692 Query: 1046 FLHD--------TQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGG--RAV 1095 FL++ + + G+ + T+ ++DE+SM+ +A ALI G R + Sbjct: 693 FLYEYKRYDPQSNRCFMKDGDYYSEAKTV-IVDEASMLTEDQLA---ALINCLSGVERFI 748 Query: 1096 ASGDTDQLQAIAPGQPF 1112 GD QL I G+PF Sbjct: 749 LVGDFRQLPPIGTGRPF 765 >UniRef50_B5GIK2 Putative uncharacterized protein n=1 Tax=Streptomyces sp. SPB74 RepID=B5GIK2_9ACTO Length = 634 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 76/268 (28%), Positives = 111/268 (41%), Gaps = 66/268 (24%) Query: 1 MMSIAQVRSAGSAGNYYTD---------------KDNYYVLGSMGERWAGRGAEQLGLQG 45 M+S+A+V+ +A YY KD G RW GRG LGL Sbjct: 1 MLSVAKVQRR-NAWRYYVRGVAFGDGRRPVGQSLKDAQETAGLPPGRWWGRGLTALGL-- 57 Query: 46 SVDKDVFTRLLE-----GRLPD-----------GADLSRMQDGSNRHRP----------- 78 + +V R +E GR PD GAD + + + +P Sbjct: 58 TAGAEVSERQMELTFGQGRHPDADRIQQHLLDDGADPATARRATVLGQPIEEIEACNQTP 117 Query: 79 --GYDLTFSAPKSVSMMAMLGG--DKRLID-AHNQAVDFAVRQVEALASTRVMTDGQSET 133 D TF S+ ++ LG +R+I+ AH +AVD A+R +E + + G+S Sbjct: 118 LLALDFTFRPQASLIVLWALGDAHTRRVIERAHERAVDRALRWLEDEVAETRWSSGRSRA 177 Query: 134 VLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH---NGE--WKTLSSDKVGKTGFIEN 188 T LV+A F H +RD P LH H +V N Q NG+ W L + + Sbjct: 178 K-TPALVVAAFRHFDNRDGFPLLHEHCLVLNRVQRLDGNGDPKWGALDTRR--------- 227 Query: 189 VYANQIAFGRLYREKLKEQV-EALGYET 215 +Y + +A G LY + +V E LG T Sbjct: 228 LYRHVVAAGTLYTLAMTTEVCEELGLAT 255 >UniRef50_C7JJ99 Conjugal transfer protein TraA n=10 Tax=Acetobacteraceae RepID=C7JJ99_ACEP3 Length = 1028 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 73/281 (25%), Positives = 111/281 (39%), Gaps = 56/281 (19%) Query: 987 FTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAV-GEMRSAGVDAQTLAS 1045 +VV GYAG GK+T +A E RV G + A G +G++++TLAS Sbjct: 359 LSVVVGYAGTGKSTMLGVARAAW----EEAGYRVRGAALSGIAAEGLEAGSGIESRTLAS 414 Query: 1046 FLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQA 1105 + +R + + + L ++DE+ MVG+ M R ++ G + V GD +QLQA Sbjct: 415 L---ERAWERGFDLLERGDVL-VVDEAGMVGSRQMERVLSVAREAGAKVVLVGDPEQLQA 470 Query: 1106 IAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPR 1165 I G FR R + SV+ + V R Sbjct: 471 IEAGGAFRAVAER------------------------------------VGSVEITTVRR 494 Query: 1166 QEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTG----RTP 1221 Q W + + E L + +++G TL EA G R Sbjct: 495 QREGWQQAATKELATGRTEQALGRYEAAGLVRGHD------TLEEARAGVVAGWEEARQA 548 Query: 1222 EAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVP 1262 E +++ H D R LN ++R AGELG + V+VP Sbjct: 549 APEESQIMLAHRRVDVRALNEAAREIRRDAGELG-DDVLVP 588 >UniRef50_UPI0001AF46AC exonuclease V subunit alpha n=1 Tax=Mycobacterium kansasii ATCC 12478 RepID=UPI0001AF46AC Length = 1941 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 57/183 (31%), Positives = 89/183 (48%), Gaps = 21/183 (11%) Query: 79 GYDLTFSAPKSVSMMAMLGGD---KRLIDAHNQAVDFAVRQVEALAS-TRVMTDGQSETV 134 GYDLTF+ KSVS + + + + + H QAV + +E A+ R+ G ++ Sbjct: 203 GYDLTFTPVKSVSALWAIAPTPIAQGIEECHRQAVAETLEFLEDQAAFARMGAHGVAQVN 262 Query: 135 LTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDKVGKTGFIEN--VYAN 192 TG L++A F+H SR +P LHTHA V+N Q + D V + ++ ++ Sbjct: 263 STG-LIVAAFDHRDSRAGDPNLHTHAAVSNKVQ------VIGPDGVPRWLALDGTPLHHA 315 Query: 193 QIAFGRLYREKLKEQVEA-LGY---ETEVV-GKHGMWEMPGVP---VEAFSGRSQTIREA 244 +A Y +++ + A LG ET GK + E+ G+ +E FS RS I Sbjct: 316 TVAASEFYNTRIEALLIAKLGVRFAETPAKRGKRPVREIVGMATALIEKFSSRSAAIDHR 375 Query: 245 VGE 247 VGE Sbjct: 376 VGE 378 >UniRef50_Q11MR5 MobA/MobL protein n=32 Tax=Rhizobiales RepID=Q11MR5_MESSB Length = 1557 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 9/128 (7%) Query: 987 FTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAV-GEMRSAGVDAQTLAS 1045 + V G AG GK+T ++ A + E++ RVVG +A G S+G+ ++TLAS Sbjct: 408 ISAVVGLAGAGKST----LLDAARIAWEADDRRVVGAALAGKAAEGLEESSGIKSRTLAS 463 Query: 1046 FLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQA 1105 + +L G + ++DE+ MV + +AR ++ G +AV GD QLQ Sbjct: 464 W----ELGWADGRDTLQKGDVLVIDEAGMVSSEQLARVLKIVEDAGAKAVLVGDPMQLQP 519 Query: 1106 IAPGQPFR 1113 I G FR Sbjct: 520 IQAGAAFR 527 >UniRef50_B3EIT2 Helicase, RecD/TraA family n=13 Tax=Bacteria RepID=B3EIT2_CHLL2 Length = 740 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 12/169 (7%) Query: 968 KLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTH 1027 +L+ Q+ A ++L +++ TV+ G GVGKTT A++ + + +++ PT Sbjct: 337 QLSPSQKEALALVL--TNKATVITGGPGVGKTTLVNAILRVI----RKKTTKILLCAPTG 390 Query: 1028 RAVGEM-RSAGVDAQTLASFLH---DTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARA 1083 RA + S G++A+T+ L ++ +RS P + ++DE+SMV M++ Sbjct: 391 RAAKRLSESTGMEAKTIHRLLEFDPNSGGFKRSSGNP-LEADMVVVDETSMVDIVLMSKL 449 Query: 1084 YALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQ 1132 + + A + GD DQL ++ PG A V + EI RQ Sbjct: 450 LSAVPAKAALLLV-GDADQLPSVGPGAVLTDIIASDAVPVVRLTEIFRQ 497 >UniRef50_C7RK95 Helicase, RecD/TraA family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RK95_9PROT Length = 752 Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 97/395 (24%), Positives = 164/395 (41%), Gaps = 55/395 (13%) Query: 774 WVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSF 833 ++ G S + + +F + Q A+D N R +D+R L A+K+ Sbjct: 158 FLHAHGVSTARAVRIFKTYGQGAVDVVRENPY-RLAQDIRGIGFLSADTIAQKVG----- 211 Query: 834 TVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKS 893 +++ RA + IS+ AL + Q H LP E LA ++D+ Sbjct: 212 --IAKDSPLRA-----QAGISY---ALTEASAQG-HCGLPYAELVPLAVKLLDI------ 254 Query: 894 FAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHI--LEGK 951 E T + EI ++ L D +G + L Y AE+S+ + L Sbjct: 255 --PESIIETAIAQEIADEV-----LVPDTVEGQPSVFLAPL--YYAEQSLAAQVRRLTTA 305 Query: 952 EAVMP------LMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAV 1005 + +P + V +L +L Q+ A R+ L S + V+ G GVGKTT ++ Sbjct: 306 ASTLPDFAADKAIPWVEQKLAIELADSQKEAIRLAL--SAKLLVITGGPGVGKTTLVNSI 363 Query: 1006 MSAVNMLPESERPRVVGLGPTHRAVGEM-RSAGVDAQTLASFLHDTQLQ---QRSGETPD 1061 ++ +++ + +P + PT RA + S G++A+T+ L L +R+ + P Sbjct: 364 LTIMSV--KGVKPLLC--APTGRAAKRLGESTGLEAKTIHRLLEVNPLNGQFKRNADNP- 418 Query: 1062 FSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAA 1121 + + DE SM+ + +A A + GD DQL ++ PGQ + Sbjct: 419 LECDVLIADECSMI-DVPLANQLLKAVATSTVMILVGDVDQLPSVGPGQFLADLIDSGSV 477 Query: 1122 DVAIMKEIVRQTPELREAVYSL--INRDVERALSG 1154 V + E+ RQ R V S INR V +L G Sbjct: 478 PVIRLTEVFRQAASSR-IVRSAHQINRGVFPSLPG 511 >UniRef50_Q6X3G0 TraA n=4 Tax=Gammaproteobacteria RepID=Q6X3G0_PSEAE Length = 1173 Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 67/288 (23%), Positives = 119/288 (41%), Gaps = 53/288 (18%) Query: 969 LTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHR 1028 L++ Q+ A R +L+ VV G AG GK+ + A +++ V G + Sbjct: 413 LSAEQQNAVRHVLKPGS-LAVVIGDAGTGKSFSMKVAREAW----QAQGFNVRGAALAGK 467 Query: 1029 AVGEMRS-AGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALI 1087 A E+++ +G+D++TLAS + ++G+ S + ++DE+ M+G+ + R Sbjct: 468 AADELQAGSGIDSRTLASL----EFAWKNGKDKLTSRDVLVIDEAGMIGSRQLGRVLKAA 523 Query: 1088 AAGGGRAVASGDTDQLQAIAPGQPFR-LQQTRSAADVAIMKEIVRQTPELREAVYSLINR 1146 G + V GD QL AI G FR + Q AA++ Sbjct: 524 EQAGAKVVLLGDDKQLAAIEAGAAFRGVVQHVGAAEI----------------------- 560 Query: 1147 DVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPM 1206 ++V RQ+ AWA S LA ++ +K D Sbjct: 561 --------------TEVRRQKEAWARAAGQELARGSVADGLAAYAERGHVK---IHDSRD 603 Query: 1207 TLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGEL 1254 +++ Y G + + +I+ H N+D + LN + + R++ GEL Sbjct: 604 AARDSLAAAYVG--DQGKGSQIILAHSNKDVQALNEAVREARKERGEL 649 >UniRef50_C7IFQ7 AAA ATPase n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IFQ7_9CLOT Length = 1178 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 42/133 (31%), Positives = 61/133 (45%), Gaps = 9/133 (6%) Query: 988 TVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA-GVDAQTLASF 1046 V+ G AG GKTT A+++AV E L PT +A +R A G +A T+ SF Sbjct: 595 CVITGEAGTGKTTIVNAIINAVEK-STGEGTTFQLLAPTGKAAERLRLATGKNAATIHSF 653 Query: 1047 L------HDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGG-GRAVASGD 1099 L +D +R G D + ++DE SM+ + + I R + GD Sbjct: 654 LVQRGWMNDNFTFKREGGVADETKKTIIIDECSMLDTVILGTLFKSINFNCVQRIIFVGD 713 Query: 1100 TDQLQAIAPGQPF 1112 +QL I G+PF Sbjct: 714 HNQLPPIGTGKPF 726 >UniRef50_A3TJZ6 Transfer protein Tra-like n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TJZ6_9MICO Length = 1920 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 43/120 (35%), Positives = 61/120 (50%), Gaps = 10/120 (8%) Query: 79 GYDLTFSAPKSVSMMAMLGGDK---RLIDAHNQAVDFAVRQVEALA-STRVMTDGQSETV 134 GYDLTFS KS+S + + + ++ AH++AV A+ +E A TR G + Sbjct: 192 GYDLTFSPVKSISTLWAVAPREVAAQIELAHHEAVGDALAFIEKHALYTREGARGVRQVD 251 Query: 135 LTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH-NGEWKTLSSDKVGKTGFIENVYANQ 193 +TG V F H SR +P LHTH VAN Q G+W + G+ F NV A++ Sbjct: 252 VTG-FVATAFTHRDSRSGDPDLHTHVAVANKVQTLAGKWLAID----GRVLFKANVTASE 306 >UniRef50_A8ZLV4 Helicase, RecD/TraA family n=18 Tax=Cyanobacteria RepID=A8ZLV4_ACAM1 Length = 753 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 77/287 (26%), Positives = 125/287 (43%), Gaps = 39/287 (13%) Query: 908 INAQIKRGDLLYVDVAKGYGTGLLV-SRASYEAEKSILRHILE--------GKEAVMPLM 958 I+A I +L+ + T LL + ++AE + R +L+ E V + Sbjct: 272 IHAMISDAELIVERLTHEGSTKLLCYAPPFFQAEFHLSRRVLQLLASSLVVDNERVRAWL 331 Query: 959 ERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERP 1018 +R + L+ Q+ A M S R ++ G G GKT R +++ + + Sbjct: 332 DRFMAQTDVSLSKQQQQAVEM--AASQRVVILTGGPGTGKTFTTRTIVALWKAMGKD--- 386 Query: 1019 RVVGLGPTHRAVGEMRSA-GVDAQTLASFLH---DTQLQQRSGETPDFSNTLFLLDESSM 1074 +V PT RA + G +A+T+ L T QR+ + P ++ + ++DE+SM Sbjct: 387 -IVLASPTGRAAQRLSEVTGHEAKTIHRLLEFDPKTMKFQRNSDNPIPADAV-VIDEASM 444 Query: 1075 VGNTDMARAYALIAA--GGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQ 1132 + D+ A +LI A + + GDTDQL ++ PG T + + E+ RQ Sbjct: 445 L---DLFLANSLIKAIDTNAQLLLVGDTDQLPSVGPGNVLLDLITSGRIPIIELTEVFRQ 501 Query: 1133 TPELREAVYSLINRDVERALSG----LESVKPSQVPRQEGAW--APE 1173 A S I R+ R G LESV PS P+ + W APE Sbjct: 502 ------AQASHIIRNAHRINQGQFPNLESVSPS--PKTDCLWLGAPE 540 >UniRef50_A4AC13 Exodeoxyribonuclease V, alpha subunit n=1 Tax=Congregibacter litoralis KT71 RepID=A4AC13_9GAMM Length = 716 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 55/172 (31%), Positives = 78/172 (45%), Gaps = 21/172 (12%) Query: 968 KLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTH 1027 LT Q+ A + LE +RF V+ G AG+GKTT R V S LP E +V L T+ Sbjct: 320 NLTEEQQTAALVFLE--NRFGVLLGGAGMGKTTLLRYVYS---QLPAEE--VIVQLALTN 372 Query: 1028 RAVGEMR-SAGVDAQTLASFL---HDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARA 1083 +A MR S G A ++A+FL D QL P + + +DE+SM+ + R Sbjct: 373 KAANRMRESTGRYACSIAAFLGRADDNQL-------PSYFSV--FVDEASMLDAIMIYRI 423 Query: 1084 YALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPE 1135 + L GD QL I PG V + +++RQ+ E Sbjct: 424 F-LAMPEDANLYLIGDHHQLPPIGPGLILHKFAETECGFVTRLTKVMRQSEE 474 >UniRef50_Q93UY8 TraA-related protein n=3 Tax=Agrobacterium RepID=Q93UY8_RHIRD Length = 1795 Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 56/211 (26%), Positives = 89/211 (42%), Gaps = 36/211 (17%) Query: 927 GTGLLVSRASYEAEKSILRHI--LEGKEAVMPLMERVPGELMEK------LTSGQRAATR 978 G L S AE++I+RH+ L +++ VPG +++ T R A Sbjct: 99 GQPLYTSTELRNAEENIIRHVSNLSAEQSFG-----VPGTIVDMVADRGIFTPELRGALH 153 Query: 979 MILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERP----RVVGLGPTHRAVGEMR 1034 L +R + G AG KT+ A+ AV+ E P ++V PT+RA E+R Sbjct: 154 Y-LSRPNRAATMVGVAGSAKTSVLGALNEAVDRFNEDTLPAEQIKLVAFVPTNRAAQELR 212 Query: 1035 SAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGG-- 1092 G L D ++ + NT+F++DE SMV ++A+ I + Sbjct: 213 QKG---------LRDVATTFKAKDRTVGKNTIFVIDEMSMVKTQEIAQLIDKIGSADSYQ 263 Query: 1093 -----RAVASGDTDQLQAIAPGQ--PFRLQQ 1116 + + GD QL + PG P +QQ Sbjct: 264 PTERPKLICVGDDRQLPPVGPGDLLPIIMQQ 294 >UniRef50_Q4A5E7 Exodeoxyribonuclease V, alpha subunit n=1 Tax=Mycoplasma synoviae 53 RepID=Q4A5E7_MYCS5 Length = 740 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 49/185 (26%), Positives = 82/185 (44%), Gaps = 22/185 (11%) Query: 937 YEAEKSILRHILEGKEAVMPL-MERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAG 995 Y+ EK I L+ ++ P+ ++ +P + L+ GQ++A L+ + T++ G G Sbjct: 310 YDKEKKI-ASFLKMLNSLNPIVLDSLPDSETKTLSEGQKSAYESFLK--NNITIISGAPG 366 Query: 996 VGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRA---VGEMRSAGVDAQTLASFL----- 1047 GK+ + + + + + L PT +A V E +A V T+ SFL Sbjct: 367 TGKSHIIKHIHNTLKQNKYKNQKEYAILAPTGKASLSVSEKINAKV--STIHSFLQIEPS 424 Query: 1048 --HDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQA 1105 H +++Q + E ++DE SMV NT + + V GD DQL A Sbjct: 425 SEHTIKVKQINTEVK-----FLIIDEFSMV-NTYIFNLLIRACPNLIKLVLVGDVDQLPA 478 Query: 1106 IAPGQ 1110 I PG Sbjct: 479 IGPGN 483 >UniRef50_Q310C7 ATP-dependent DNA helicase, RecD/TraA family n=4 Tax=Deltaproteobacteria RepID=Q310C7_DESDG Length = 698 Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 60/200 (30%), Positives = 94/200 (47%), Gaps = 21/200 (10%) Query: 957 LMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESE 1016 L+ R L EK Q A R L+ S +++ G AG GK+ +S +N + E Sbjct: 275 LIRRCASTLNEK----QLDAVRSALQHS--ISLISGGAGSGKSY----TISVINTICEES 324 Query: 1017 RPRVVGLGPTHRAVGEMRS-AGVDAQTLASFL-HDTQLQQRSGETPDFSNTLFLLDESSM 1074 VV PT +A + +G T+ L +D + RS E P ++ L ++DE SM Sbjct: 325 DLEVVLAAPTGKAAKRLEEVSGRSGTTIHRLLGYDGKGFSRSKENPIDADVL-VVDEFSM 383 Query: 1075 VGNTDMARAYALIAA---GGGRAVASGDTDQLQAIAPGQPFR-LQQTRSAADVAIMKEIV 1130 V D+ A+ L A + GD +QL + PG R L QTR+ V I+ ++V Sbjct: 384 V---DVPLAWHLFEAVDLSRTTVLLVGDHNQLPPVGPGNILRDLIQTRAIPTV-ILDKVV 439 Query: 1131 RQTPELREAVYSLINRDVER 1150 RQ L+E +++ +V + Sbjct: 440 RQAGVLKENCTAVLKGEVRK 459 >UniRef50_C5B6U1 Conjugal transfer protein TraA n=1 Tax=Methylobacterium extorquens AM1 RepID=C5B6U1_METEA Length = 964 Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 51/157 (32%), Positives = 75/157 (47%), Gaps = 11/157 (7%) Query: 969 LTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVV-GLGPTH 1027 L + Q AA R + +D +V GYAG GK+T A A + R + G+ + Sbjct: 342 LGAEQDAAFRSVTGGAD-LALVTGYAGTGKSTMLAAARVAWEAAGYTVRGAALSGIAAEN 400 Query: 1028 RAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALI 1087 G +G+ ++TLAS H Q R T S + ++DE+ MVG+ M R + Sbjct: 401 LEAG----SGILSRTLASLEH-AWGQGRDALT---SRDVLVIDEAGMVGSRQMERVLSAA 452 Query: 1088 AAGGGRAVASGDTDQLQAIAPGQPFR-LQQTRSAADV 1123 G + V GD +QLQAI G FR L + AA++ Sbjct: 453 QTAGAKIVLVGDPEQLQAIEAGAAFRALLERHGAAEI 489 >UniRef50_Q131S0 MobA/MobL protein n=37 Tax=cellular organisms RepID=Q131S0_RHOPS Length = 1039 Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 76/278 (27%), Positives = 119/278 (42%), Gaps = 52/278 (18%) Query: 989 VVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRS-AGVDAQTLASFL 1047 +V GYAG GK+ A++ E+ V G+ + A + S +G+ ++T+AS Sbjct: 408 IVVGYAGAGKS----AMLGVAREAWEAAGYEVRGVALSGIAAENLESGSGIASRTIASLE 463 Query: 1048 HDTQLQQRSGETPDF--SNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQA 1105 H G+ D + + ++DE+ MVG + R + A G + V GD QLQA Sbjct: 464 HGW------GQGRDLLSARDVLVIDEAGMVGTRQLERVLSHAAEAGAKVVLVGDPQQLQA 517 Query: 1106 IAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPR 1165 I G FR R VAI E+ RQ E RD R L+ ++ Sbjct: 518 IEAGAAFRSIHERHGG-VAI-GEVRRQREEW--------QRDATRDLATGKT-------- 559 Query: 1166 QEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEARE 1225 GA ++ + + A ++++A +GE L + RD +R Sbjct: 560 --GA-----AIHAYDENGMVHAAASRERA--RGE--------LIDRWDRDRQASPDRSR- 601 Query: 1226 QTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPV 1263 +I+TH N++ R LN + AG+LG E V V V Sbjct: 602 --IILTHTNDEVRALNEGARERMRAAGDLG-EDVHVTV 636 >UniRef50_C6AF24 Conjugal transfer protein TraA n=2 Tax=Bartonella grahamii as4aup RepID=C6AF24_BARGA Length = 1236 Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 12/148 (8%) Query: 968 KLTSGQRAATRMILETSDR-FTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPT 1026 K + Q+ A + I T D+ V GYAG GK+T ++ A N+ + RV G Sbjct: 389 KFSEEQKLAVQHI--TDDKGIAAVVGYAGAGKST----LLEAANIAWVNSGKRVFGAALA 442 Query: 1027 HRAV-GEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYA 1085 +A G S+ + ++TLA++ +L ++ + +F++DE+ MV + ++ Sbjct: 443 GKAAEGLEESSKIKSKTLAAW----ELAWKNKKDELRVGDVFVIDEAGMVSSKQLSHFVQ 498 Query: 1086 LIAAGGGRAVASGDTDQLQAIAPGQPFR 1113 + G + V GD QLQ I G FR Sbjct: 499 KVEKAGAKIVLVGDNMQLQPIEAGAAFR 526 >UniRef50_Q6LR56 Putative ATP-dependent exoDNAse (Exonuclease V), alpha subunit n=1 Tax=Photobacterium profundum RepID=Q6LR56_PHOPR Length = 723 Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 70/240 (29%), Positives = 98/240 (40%), Gaps = 31/240 (12%) Query: 871 ALPVVESK-KLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTG 929 LP+V + KL + DL A S A GFTE IN + G L++++ T Sbjct: 255 VLPLVRKRLKLDVNEFDLTESAMSLAVRKFGFTE----INGRFHHGTYLFMEMVI---TH 307 Query: 930 LLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTV 989 S S +AE + L E + ME P L EK Q A LE + Sbjct: 308 RFKSMLSKKAEWTDLH-----PEVINKAMENNPFSLTEK----QAEAVFKALEYN--LAT 356 Query: 990 VQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVDAQTLASFLHD 1049 + G AG GKTT R V+ A + L V L A+ +S G T+A FL Sbjct: 357 IIGGAGTGKTTVLRTVLRAFHEL--GYNIHAVALAGK-AAMTLKKSVGFQTSTIARFLGQ 413 Query: 1050 TQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPG 1109 L + + ++DE+SMV M + L + R + GD +QL +I G Sbjct: 414 KPLVE--------GKHVVIIDEASMVDLPTMFQI-VLHCSPDVRFILVGDDNQLASIRAG 464 >UniRef50_A6GES1 Exodeoxyribonuclease V n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GES1_9DELT Length = 813 Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 49/159 (30%), Positives = 78/159 (49%), Gaps = 20/159 (12%) Query: 963 GELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVG 1022 GEL + L+ GQR A + T++ G G GK+T V + +N+ + P ++ Sbjct: 348 GELPDHLSEGQRRAVEAVARCG--VTILTGGPGTGKST---VVANVLNVAKAALVPIMLA 402 Query: 1023 LGPTHRAVGEM-RSAGVDAQTLASFLHDTQLQQRSGETPDFSNT-----LFLLDESSMVG 1076 PT RA + ++ G A+T+ L ++Q +GE +N L ++DESSM+ Sbjct: 403 -APTGRAAKRLEQTTGEAARTVHRLL---EVQGETGEFKHCANDPLPPGLVVIDESSML- 457 Query: 1077 NTDMARAYALIAA--GGGRAVASGDTDQLQAIAPGQPFR 1113 D+ A ALI + R + GD DQL ++ PG R Sbjct: 458 --DLELAEALITSLTADNRLLLVGDADQLPSVGPGNVLR 494 >UniRef50_C6XTP7 Exonuclease V subunit alpha n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6XTP7_PEDHD Length = 480 Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 45/213 (21%) Query: 947 ILEGKEAVMPLMERVPG--ELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRA 1004 I+ G A P E++ E+ E L+ G ++ +++GYAG GKTT A Sbjct: 6 IIAGAYAFTPTAEQLDFCREMAEFLSHG----------LDNQCFILRGYAGTGKTTSVAA 55 Query: 1005 VMSAVNMLPESERPRVVGLGPTHRAVGEMRS-AGVDAQTLASFLHDTQLQQRSGETPDFS 1063 ++ A LP+ + R V L PT RA M + G A T +H ++R+ D S Sbjct: 56 LVKA---LPQF-KYRSVLLAPTGRAAKVMSNYTGKKALT----IHKKIYRKRAAVATDLS 107 Query: 1064 ---------NTLFLLDESSMV--------GNTDMARAYALIAAGGGRA-VASGDTDQLQA 1105 +TLF++DE+SMV G++ + A + G A V GDT QL Sbjct: 108 FQLAPNLAEHTLFIVDEASMVADEWITHTGSSFLKDLMAFVYNGKNCALVFVGDTAQLPP 167 Query: 1106 IAPGQPFRLQQTRSAADVAI------MKEIVRQ 1132 + L + A++ +KE+VRQ Sbjct: 168 VGSIDSPALNKAYLASNFGKLVSAVELKEVVRQ 200 >UniRef50_A8S078 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S078_9CLOT Length = 655 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 41/118 (34%), Positives = 54/118 (45%), Gaps = 9/118 (7%) Query: 1020 VVGLGPTHRAVGEMRSA--GVDAQTLASFLHDTQLQQRSGETPDFSNT-LFLLDESSMVG 1076 V+ + PT RA M DA T+ S L ++ E+ DF L L+DE SMV Sbjct: 280 VLLMAPTGRASRRMAECTGCTDASTMHSALGLVS-EEMESESCDFLEADLILVDEMSMV- 337 Query: 1077 NTDMARAYALIA--AGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQ 1132 DM AY G R V GD +QL ++ PG FR A V ++ +I RQ Sbjct: 338 --DMRLAYEFFTRIKRGTRVVLIGDVNQLSSVGPGNVFRELIQCGAVPVTVLDQIFRQ 393 >UniRef50_Q58IP1 Putative uncharacterized protein n=1 Tax=Streptomyces sp. FQ1 RepID=Q58IP1_9ACTO Length = 1430 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 47/146 (32%), Positives = 73/146 (50%), Gaps = 9/146 (6%) Query: 969 LTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHR 1028 ++ QRAAT L V++G AG GKTT +MSA M E+ RV G Sbjct: 571 MSDEQRAATLRFLTAGHGVDVLRGKAGTGKTT----IMSAARMGWEAAGLRVAGAATAAV 626 Query: 1029 AVGEMRS-AGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALI 1087 A ++++ +G+ + T+A++L D R G + +L+E++MV + D+A Sbjct: 627 AASKLQAESGITSATVATWLMDI----RDGGRRMADTDVLVLEEAAMVDDRDVADLLTAA 682 Query: 1088 AAGGGRAVASGDTDQLQAIAPGQPFR 1113 A G + V GD QL+AI G F+ Sbjct: 683 AEHGVKVVQIGDWAQLKAIGVGGGFK 708 >UniRef50_C6MRB9 TrwC protein n=1 Tax=Geobacter sp. M18 RepID=C6MRB9_9DELT Length = 111 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 14/103 (13%) Query: 148 TSRDQEPQLHTHAVVAN-VTQHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKE 206 TSR+ +PQLH+H V N V +G WK ++ +Q + G LYR+ L Sbjct: 13 TSRNVDPQLHSHVFVVNAVHAGDGSWKANEP---------RAIFQDQKSLGLLYRQALAL 63 Query: 207 QVEALGYETEVVGKHGMW-EMPGVP---VEAFSGRSQTIREAV 245 ++ G+E EV + M+ E+ GV +E FS R I E V Sbjct: 64 ELSDRGFEVEVRDRSQMFIELKGVDPLLIEHFSSRRLAIEEQV 106 >UniRef50_Q6MDD6 Putative exodeoxyribonuclease V n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MDD6_PARUW Length = 721 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 17/182 (9%) Query: 958 MERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESER 1017 +E V +L +L Q+ A + T + ++ G G GK+T A++ +L + Sbjct: 314 VEWVQAQLKIELAPNQKEAVAKAIST--KLHIITGGPGTGKSTITNAILQITAILTQ--- 368 Query: 1018 PRVVGLGPTHRAVGEM-----RSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDES 1072 +++ PT RA M R A L T +R+ E P L ++DE+ Sbjct: 369 -KILLAAPTGRAAKRMSEITKRKASTIHSLLEYDFKSTGGFKRNRENP-LDCDLIIIDEA 426 Query: 1073 SMVGNTDMARAYALIAA--GGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIV 1130 SM+ D Y+L+ A R + GD QL ++ PG T V +KEI Sbjct: 427 SMI---DTFLMYSLLKALPDHTRVIFVGDIHQLPSVGPGNVLSDMITSLTISVTTLKEIF 483 Query: 1131 RQ 1132 RQ Sbjct: 484 RQ 485 >UniRef50_C3QZL9 ATP-dependent exoDNAse n=20 Tax=Bacteroidales RepID=C3QZL9_9BACE Length = 472 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 45/150 (30%), Positives = 77/150 (51%), Gaps = 23/150 (15%) Query: 974 RAATRMILET-SDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGE 1032 ++ ++ +L T +D +++GYAG GKT+ A++ ++ L + + V L PT RA Sbjct: 27 KSLSKFLLSTLADEVFILRGYAGTGKTSLVGALVKTMDQLQQ----KSVLLAPTGRAAKV 82 Query: 1033 MRS-AGVDAQTLASFLHDTQLQQRSGETPDFS-------NTLFLLDESSMVGNTDMARAY 1084 + AG A T+ ++ + Q S E +FS NTLF++DE+SM+ N ++ + Sbjct: 83 FSAYAGHPAFTIHKKIY--RQQSFSNELSNFSINDNLATNTLFIVDEASMISNEGLSGS- 139 Query: 1085 ALIAAGGGRAVASGDTDQLQAIAPGQPFRL 1114 G GR + D +Q + GQ RL Sbjct: 140 ---MFGTGRLL----DDLVQFVYSGQGCRL 162 >UniRef50_A5IZI9 Exodeoxyribonuclease V alpha chain n=1 Tax=Mycoplasma agalactiae PG2 RepID=A5IZI9_MYCAP Length = 756 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 57/234 (24%), Positives = 97/234 (41%), Gaps = 25/234 (10%) Query: 908 INAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELME 967 +N I+RG++ + +K + + + A+K I E K+ V PL + Sbjct: 297 LNVMIQRGEVYFDSDSKRLSLNEVYEQELFVAKKLIKIRDSELKQQVNPLTS-------Q 349 Query: 968 KLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTH 1027 KL Q+ A L ++ +V+ GY G GK+ ++ + ++ + L PT Sbjct: 350 KLAEEQKKAYASAL--NNPLSVITGYPGTGKSYLIAYIVETLLKDKHYKKKDIAVLTPTG 407 Query: 1028 RAVGEM-RSAGVDAQTLASFLH-------DTQLQQRSGETPDFSNTLFLLDESSMVGNTD 1079 RA + G++A+T+ SFL D+ ++ E P + ++DE SMV Sbjct: 408 RASTILAYKTGIEARTIHSFLKLSKPDEDDSFIESFEKENPI---KVVVIDEFSMVS--- 461 Query: 1080 MARAYALIAAGGG--RAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVR 1131 + Y L+ R + GD DQL I G ++KEI R Sbjct: 462 LPIMYELLKTCTSIERLILVGDRDQLPCIGKGNLLEDIINSKKLPTFVLKEIHR 515 >UniRef50_B3E889 Exodeoxyribonuclease V n=2 Tax=Bacteria RepID=B3E889_GEOLS Length = 1214 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 29/206 (14%) Query: 934 RASYEAEKSILRHI--LEGKEAVM---PLMERVPGELMEKLTSGQRAATRMILETSDR-- 986 R +YEAE+ I I L G + P+ ER +L+ + S +R E + Sbjct: 525 RGAYEAEREIEDRIRKLAGYSDITFRSPVTERHWKDLLFEAKSPLAEKSRHDYEVAIEAQ 584 Query: 987 -----------FTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMR- 1034 +VV G AG GKTT R+++ A+ ++ ++ L PT +A +R Sbjct: 585 AAVCAKIFNRPISVVCGAAGTGKTTIIRSIIQAIEKAHGTDATFLL-LAPTGKAADRIRE 643 Query: 1035 SAGVDAQTLASFLH-------DTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAY-AL 1086 G +A T+ SFL + L+ G+ D T F++DE+SM+ +A + A+ Sbjct: 644 KTGKEASTIHSFLARRGWLNPNLTLKHSGGQRED-QVTTFVIDEASMLDLELLAAVFRAI 702 Query: 1087 IAAGGGRAVASGDTDQLQAIAPGQPF 1112 + R + GD +QL I G+ F Sbjct: 703 NWSAVQRIILVGDPNQLPPIGRGKVF 728 >UniRef50_C0CKX9 Putative uncharacterized protein (Fragment) n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CKX9_9FIRM Length = 489 Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 26/200 (13%) Query: 926 YGTGLLVSRASYEAEKSILRHILE-GKEAVMPLMERVP---GELMEKLTSGQRAATRMIL 981 +G L + YE K I+ +++E KE V E E + ++ + + Sbjct: 25 FGKNYLYIKEHYEDTKQIIENLIELSKEGVSGYRNFANYWISENPETVNCDEKKQILLEM 84 Query: 982 ETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVDAQ 1041 S + +++ G AG GKT +++ V L + R + L T+ AV +R + AQ Sbjct: 85 FDSSKVSLIYGAAGTGKTY----LLNHVAQLFDDRRK--LFLSNTNPAVDNLRRK-IKAQ 137 Query: 1042 -----TLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVA 1096 T+A FL + L D S L ++DE SM+ N+DM + L A V Sbjct: 138 NCKFSTIAKFLGRSTL--------DISFDLLIMDECSMISNSDMRK--VLEKAKYKLLVL 187 Query: 1097 SGDTDQLQAIAPGQPFRLQQ 1116 GDT Q++AI+ G F L + Sbjct: 188 VGDTYQIEAISFGNWFSLAR 207 >UniRef50_C5V224 AAA ATPase n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V224_9PROT Length = 772 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 46/149 (30%), Positives = 66/149 (44%), Gaps = 13/149 (8%) Query: 968 KLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTH 1027 +LT QR A +I + G AG GKTT A++ N++ E + Sbjct: 352 ELTGEQREA--VISAVMAPVCCISGGAGTGKTTILNAILGVFNVIAEG--IPCYQMAVAG 407 Query: 1028 RAVGEM-RSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYAL 1086 RA M S G AQT+A F+ T L+ + + P N + ++DE+SMV D+ Y L Sbjct: 408 RAAQRMAESTGRPAQTIAKFIV-THLRDKKSDLP--PNIILVIDEASMV---DLLSMYKL 461 Query: 1087 IAA--GGGRAVASGDTDQLQAIAPGQPFR 1113 I R + GD QL + G F Sbjct: 462 IGILPSATRILFVGDASQLPPVGDGLIFH 490 >UniRef50_D1R7Z3 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R7Z3_9CHLA Length = 727 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 14/153 (9%) Query: 986 RFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRS-AGVDAQTLA 1044 + ++ G G GK+T +A++ + E +++ PT RA M G A T+ Sbjct: 341 KMHIITGGPGTGKSTITKAILG----ITEKLTSKILLAAPTGRAAKRMSEITGKKASTIH 396 Query: 1045 SFL-HDTQLQ--QRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAA--GGGRAVASGD 1099 S L +D + + +R+ +P + L ++DESSM+ D Y+L+ A R + GD Sbjct: 397 SLLEYDFKGKGFKRNRSSPLVCD-LLIIDESSMI---DTFLMYSLLKAIPDNARVIFVGD 452 Query: 1100 TDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQ 1132 +QL ++ PG + V + EI RQ Sbjct: 453 INQLPSVGPGNVLQDLIASQVVSVTTLNEIFRQ 485 >UniRef50_Q6N7J7 Possible Viral (Superfamily 1) RNA helicase n=1 Tax=Rhodopseudomonas palustris RepID=Q6N7J7_RHOPA Length = 1253 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 53/174 (30%), Positives = 80/174 (45%), Gaps = 21/174 (12%) Query: 952 EAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNM 1011 +AV+P ME P +E+L +++ L RF+V+ G AG GKTT + + Sbjct: 604 DAVLPPMEAGPEAEVEELARREKSGALEQLACG-RFSVLIGPAGSGKTTLLKVLCD---- 658 Query: 1012 LPESERPRVVGLGPTHRAVGEMRSAGV---DAQTLASFLHDTQLQQ-------RSGETP- 1060 LPE ++ L PT +A + A + QTLA FL + R+ + P Sbjct: 659 LPEISSGGILLLAPTGKARVRLEEATKRLGEGQTLAQFLQRYERYDGASGRYFRNPKAPR 718 Query: 1061 DFSNTLFLLDESSMVGNTDMARAYALIAA--GGGRAVASGDTDQLQAIAPGQPF 1112 + ++DE SM+ ++ ALI A G R + GD QL I G+PF Sbjct: 719 EKGYRSVIVDECSMLTEDQLS---ALIDAIEGVDRLILVGDPRQLPPIGAGRPF 769 >UniRef50_A3ZSA6 Possible Viral (Superfamily 1) RNA helicase n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZSA6_9PLAN Length = 1276 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 59/183 (32%), Positives = 85/183 (46%), Gaps = 28/183 (15%) Query: 961 VPGEL----MEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESE 1016 +PG++ +E+L ++ A L +S RF+V+ G AG GKTT ++S + P Sbjct: 624 LPGDVGEREIEELARKEKTAALEELASS-RFSVLIGRAGTGKTT----LLSVLCAQPRIS 678 Query: 1017 RPRVVGLGPTHRAVGEM----RSAGVD---AQTLASFL-------HDTQLQQRSGETPDF 1062 + V+ L PT +A M R AG+ A TLA L +TQ +G+ D Sbjct: 679 KEGVLLLAPTGKARVRMEDVARKAGIKNSQAFTLAQHLSQSGRYDRNTQRYLLTGKRGDP 738 Query: 1063 SNTLFLLDESSMVGNTDMARAYALIAA--GGGRAVASGDTDQLQAIAPGQPFRLQQTRSA 1120 ++DE SM+ MA ALI + R + GD QL I G+PF TR Sbjct: 739 LAKTVIVDECSMLTEEMMA---ALIESLIKVDRLIFVGDYRQLPPIGAGRPFIDIVTRLQ 795 Query: 1121 ADV 1123 DV Sbjct: 796 PDV 798 >UniRef50_UPI0001C31D3E helicase, RecD/TraA family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31D3E Length = 741 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 52/175 (29%), Positives = 72/175 (41%), Gaps = 25/175 (14%) Query: 968 KLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTH 1027 +LT+ Q A R R +VV G G GKT R + + +R R + + PT Sbjct: 326 ELTAEQWAGVRGAF--VHRLSVVTGGPGTGKTASIRMI----GQIARDQRARTMLVAPTG 379 Query: 1028 RAVGEMRSA-GVDAQTLASFL---------HDTQLQQRSGETPDFSNTLFLLDESSMVGN 1077 RA M A G+DA T+ S L HD +TP L ++DE+SM N Sbjct: 380 RAALRMTEATGLDASTVHSALGWIPGEGPVHDE-------DTP-LRCDLVIVDETSMA-N 430 Query: 1078 TDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQ 1132 ++ G V GD DQL + G+PF A ++ I RQ Sbjct: 431 LELLVTLLRAIGPGTHVVLVGDADQLAPVGAGKPFAELVASGRVPTARLQHIFRQ 485 >UniRef50_B7J7Z5 Helicase, RecD/TraA family n=1 Tax=Acidithiobacillus ferrooxidans ATCC 23270 RepID=B7J7Z5_ACIF2 Length = 711 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 51/158 (32%), Positives = 74/158 (46%), Gaps = 16/158 (10%) Query: 982 ETSDR-FTVVQGYAGVGKTTQFR-AVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA-GV 1038 + SDR ++ G G+GKTT + SAV + RV PT RA M A G+ Sbjct: 331 QISDRKLAILAGGPGMGKTTLLKTCAQSAV-----ASGMRVALCAPTGRAAKRMNEATGM 385 Query: 1039 DAQTLASFLHDTQ--LQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRA-- 1094 +A+T+ L + L +R+ + P ++DE SM+ DM A+ L A RA Sbjct: 386 EAKTIHRLLEMKRGGLAERNRDNP-IEADWIIVDEVSML---DMELAWKLFDAIPARARV 441 Query: 1095 VASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQ 1132 + GD DQL ++ PGQ VA + +I RQ Sbjct: 442 LLVGDPDQLPSVGPGQVLADLIACGKVTVARLSKIFRQ 479 >UniRef50_A6P2F0 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P2F0_9BACE Length = 726 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 78/181 (43%), Gaps = 13/181 (7%) Query: 958 MERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVN-MLPESE 1016 ++R E+ QR A R L + ++ G G GK + RA+++ + P+S+ Sbjct: 318 IDRQQAEMGFTFAQEQRHAIRTALTSP--ICIISGGPGTGKASIQRAILNIYKKVFPDSD 375 Query: 1017 RPRVVGLGPTHRAVGEM-RSAGVDAQTLASFLHDTQLQ-QRSGETPDFSNTLFLLDESSM 1074 VV PT RA M +S G A T+ L+ T + + E L L+DE SM Sbjct: 376 ---VVCCAPTGRAARRMEQSTGYPASTIHKALNLTAGELHKLRELQLLEADLVLVDEVSM 432 Query: 1075 VGNTDMARAYALIAA--GGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQ 1132 + DM + L A R + GD DQL ++ PG I+ ++ RQ Sbjct: 433 M---DMVTTWCLFNALPPNCRLILVGDADQLPSVGPGAVLNELLASGRLPAVILDKVFRQ 489 Query: 1133 T 1133 + Sbjct: 490 S 490 >UniRef50_B1I2W6 Helicase, RecD/TraA family n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I2W6_DESAP Length = 688 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 48/169 (28%), Positives = 67/169 (39%), Gaps = 8/169 (4%) Query: 968 KLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTH 1027 +LT Q AA + LE+ F+++ G GVGKT RAV+ A + ++ V PT Sbjct: 302 ELTPDQNAAVKTALESG--FSILTGGPGVGKTQTVRAVIRAFEL--QNPWGGVFLCAPTG 357 Query: 1028 RAVGEMRSA-GVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYAL 1086 RA + G A T+ L L +LDE+SM R Sbjct: 358 RAARRLSEVTGRQAHTVHKLLGLRNGHADRNRKNPLECDLLILDEASMACLVLTKRLLEA 417 Query: 1087 IAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPE 1135 + R + GD DQL ++ PG R + EI RQ E Sbjct: 418 V-PNNARILFVGDADQLPSVGPGNILR--DLLDKVPTVRLTEIFRQAAE 463 >UniRef50_Q2S429 Putative deoxyribonuclease n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S429_SALRD Length = 421 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 38/112 (33%), Positives = 56/112 (50%), Gaps = 15/112 (13%) Query: 981 LETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAV----GEMRSA 1036 L +RFT ++GYAG GKT V V L + E V PTH+AV E+ A Sbjct: 24 LAQGERFTGLRGYAGTGKTY---LVSRLVEQLLD-EDCTVTVCAPTHKAVQVLSDELGDA 79 Query: 1037 GVDAQTLASFL-------HDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMA 1081 V QTL SFL D + + + E +F+ + ++DE+SM+G + + Sbjct: 80 PVQMQTLHSFLGLRLQPKQDGEYELVAEEERNFAEGVVIVDEASMIGREEWS 131 >UniRef50_D1T3Y7 Putative ATP-dependent exoDNAse (Exonuclease V), alpha subunit n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1T3Y7_9BURK Length = 757 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 83/348 (23%), Positives = 127/348 (36%), Gaps = 44/348 (12%) Query: 969 LTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHR 1028 ++ QR A + E +R V+ G AGVGKTT R + V+ R Sbjct: 345 FSAEQRIAVHLAAE--NRLCVISGGAGVGKTTILRCIYRVYR----EASILVIQAALAGR 398 Query: 1029 AVGEMRSA-GVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALI 1087 A M S G+ A+TLA+ +Q S + + ++DE+SMV M R +L+ Sbjct: 399 AAKRMESVTGLPARTLAALQRKVTPEQLS------EHCVIVVDEASMVDIITMYRLCSLL 452 Query: 1088 AAGGGRAVASGDTDQLQAIAPGQPF-------RLQQTRSAADVAIMKEIVRQTPELREAV 1140 R + GD QL + PG R+ Q EI R +R Sbjct: 453 PP-HVRLLLVGDALQLMPVGPGLVLHALTSNSRIPQVHLEVPQRFAGEIARAATSVRTGT 511 Query: 1141 YSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTE-FSHSQEAKLAEAQQKAMLKGE 1199 + I D++ + L R + AW+ +V F +A +K +G Sbjct: 512 WPEIPSDLDAPVVFLRRKPALATGRVDSAWSIAQTVLSLFQLEPKASQILCARKRGKEGV 571 Query: 1200 AFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQV 1259 + L EA TG P + NS + + LG V Sbjct: 572 ------LALNEACQNVLTGSAPCL--------------TIWNSELDALCNTGFRLGDPVV 611 Query: 1260 MVPVLNTANIRDGELRRLSTWETHRDALVL--VDNVYHRIAGISKDDG 1305 L +A +++G L L E ++ D + + IA I DDG Sbjct: 612 CTRNLYSAGLQNGSLGTLCKIEPEPKPVIADRGDMLGNAIAWIDWDDG 659 >UniRef50_C5V7K0 AAA ATPase n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V7K0_9PROT Length = 762 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 46/145 (31%), Positives = 70/145 (48%), Gaps = 10/145 (6%) Query: 990 VQGYAGVGKTTQFRAVMSAVNMLPESERP--RVVGLGPTHRAVGEMRSAGVDAQTLASFL 1047 + G AG GKTT RAV+ L SE P +V G + + E S G AQT+A + Sbjct: 369 ISGGAGTGKTTILRAVLGCYESL-ASELPSYQVAVAGRAAQRIAE--STGKPAQTIAKLI 425 Query: 1048 HDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIA 1107 + + + E PD+ L ++DESSM+ M R L+ R + GD+ Q+ + Sbjct: 426 AEHTGEGKP-ELPDY--LLLIVDESSMLDLLSMYRLVRLLPY-AVRIIFVGDSMQILPVG 481 Query: 1108 PGQPFRLQQTRSAADVAIMKEIVRQ 1132 G F Q+ S +K+++RQ Sbjct: 482 KGLVFHALQSSSVPFFE-LKQVMRQ 505 >UniRef50_Q14LX3 Putative exodeoxyribonuclease v alpha subunit protein n=1 Tax=Spiroplasma citri RepID=Q14LX3_SPICI Length = 720 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 12/178 (6%) Query: 964 ELMEKLTSGQRAATRM----ILETS--DRFTVVQGYAGVGKTTQFRAVMSAVNMLPESER 1017 E +EKLT+ ++ M ++T+ F V+ G G GKTT V+S + + ++ Sbjct: 306 EELEKLTNKKQIIYNMNQTKAIKTAVHSNFLVIIGGPGTGKTTVVDGVVSLLKKV--YQQ 363 Query: 1018 PRVVGLGPTHRAVGEMR-SAGVDAQTLASFLHDTQL--QQRSGETPDFSNTLFLLDESSM 1074 ++V PT +A +R G A T+ L L Q E N + +LDE SM Sbjct: 364 SKIVLAAPTGKAAKRLREKTGRKALTIHKLLKYDALTNQFFYNENNPLENDILILDEVSM 423 Query: 1075 VGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQ 1132 V + +A+ A + + + GD +QL ++A G R +V ++E+ RQ Sbjct: 424 VDSLLLAQI-AKASVNLRKLILIGDPNQLPSVACGDLLRDIIQSDVFNVIKLEEVYRQ 480 >UniRef50_B9NXA5 Putative MobA/MobL protein n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NXA5_9RHOB Length = 3238 Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust. Identities = 47/170 (27%), Positives = 79/170 (46%), Gaps = 14/170 (8%) Query: 965 LMEKLTSGQR-AATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGL 1023 L E L QR AA M+ + DR ++V GY GVGKT + + ++ V+G Sbjct: 363 LSEGLRETQRNAALEMV--SPDRLSLVTGYGGVGKTY----TIGQAAKVWKARGYEVLGG 416 Query: 1024 GPTHRAVGEMRSAG-VDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMAR 1082 + +A E+ + ++ +LA++ + + G P +F LDE MVG + R Sbjct: 417 AISGKATQELSTIPEMEIASLAAW----ESRWARGALPVQGKFVFFLDEIGMVGGDTLVR 472 Query: 1083 AYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQ 1132 ++ GG+ + SGD +QLQ + + + +M +IVRQ Sbjct: 473 VLKRVSDMGGKLIVSGDGEQLQPVMDSSI--VDALLEVKEPVLMDQIVRQ 520 Score = 43.9 bits (102), Expect = 0.054, Method: Compositional matrix adjust. Identities = 52/195 (26%), Positives = 81/195 (41%), Gaps = 15/195 (7%) Query: 965 LMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVG-- 1022 L LT GQR +L+ + R T+V G G GK+ V+ + ++ V+G Sbjct: 1693 LSPSLTKGQRPGALAMLD-AKRLTLVTGDPGAGKSY----VIGEAAKVWQARGYEVIGGA 1747 Query: 1023 -LGP-THRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDM 1080 GP T +++ +D TLA++ + + G P +F +DE+ MVG Sbjct: 1748 SSGPITQDLATDVKH--MDVATLAAW----EARWERGWRPASGRFVFFMDEAGMVGGDTW 1801 Query: 1081 ARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAV 1140 AR I A GG+ VA G QLQ + + + M E++RQ L Sbjct: 1802 ARVQKRIDALGGKLVAVGGPGQLQPTSESSAQLVLMEQEQIGFTAMYEVIRQENHLERHA 1861 Query: 1141 YSLINRDVERALSGL 1155 + A+S L Sbjct: 1862 SKQLEEGGSEAISAL 1876 Score = 43.5 bits (101), Expect = 0.073, Method: Compositional matrix adjust. Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 7/110 (6%) Query: 1337 IRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDL 1396 +++ TGDR+ FT S R G +S TV A+ V + + TR + + D Sbjct: 1965 LKLRTGDRIMFTASHRGLGIPKSSFGTVQAIRAQQVDILIDKHTRPVTVDLNEFSS-FDY 2023 Query: 1397 AYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVY 1446 YA T H +QG S+ + L NR ++ V +R Q ++Y Sbjct: 2024 GYATTVHKSQGMSKDYVYGLGHGYMNRHVLT------VMATRHHQAFELY 2067 >UniRef50_C5SD04 Helicase, RecD/TraA family n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SD04_CHRVI Length = 694 Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust. Identities = 50/174 (28%), Positives = 81/174 (46%), Gaps = 22/174 (12%) Query: 968 KLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTH 1027 +L+ QRAA +L + + ++ G GVGKTT V++++ +L +++ RV PT Sbjct: 326 QLSDSQRAAIARVL--AAKVAILTGGPGVGKTT----VVNSLLLLLQAKHTRVRLCAPTG 379 Query: 1028 RAVGEM-RSAGVDAQTLASFLHDTQLQQRSGETPDFSNT--------LFLLDESSMVGNT 1078 RA + S G +A+T+ L + ET F +T L ++DE SMV + Sbjct: 380 RAAKRLSESTGREARTIHRLL------EFDPETFGFKHTADNPLDLDLLVVDEVSMVDVS 433 Query: 1079 DMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQ 1132 M + + G + GD DQL ++ PG A A + +I RQ Sbjct: 434 LMNQLLRAVPDHAG-VLLVGDVDQLPSVGPGAVLADLIASGAVVTARLTDIFRQ 486 >UniRef50_A6LEW0 ATP-dependent exonuclease V, alpha subunit-helicase superfamily I member n=16 Tax=Bacteroidales RepID=A6LEW0_PARD8 Length = 471 Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust. Identities = 71/283 (25%), Positives = 116/283 (40%), Gaps = 46/283 (16%) Query: 979 MILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMR-SAG 1037 ++ E D +++GYAG GKT+ A++ +N L + + L PT RA AG Sbjct: 33 LLSEEPDSLLLMKGYAGTGKTSLVGALVKTLNEL----KQKTFLLAPTGRAAKVFSGYAG 88 Query: 1038 VDAQTLASFLHDTQLQQR--SGETPDF-------SNTLFLLDESSMVGNTDMARAYALIA 1088 A T +H +QR S E F +TLF++DE+SM+ N + Sbjct: 89 QKAYT----IHKKIYRQRAFSNEPTGFMPADNLHKDTLFIVDEASMIANEGLDS----FV 140 Query: 1089 AGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDV 1148 G GR + D +Q + G+ RL I+ V Q P + + +N ++ Sbjct: 141 FGSGRLL----DDLIQYVYSGENCRL----------ILMGDVAQLPPVMQTESPALNPEI 186 Query: 1149 ERALS-GLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMT 1207 R + + + +QV RQ + T + E K LKG F D Sbjct: 187 LRGYNLQVWEIALTQVVRQSEDSGILFNATRLRDALRNHTVEIFPKLQLKG--FSDFTKV 244 Query: 1208 ----LYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHD 1246 L E I Y+ + E+T+I++ N+ + N+ I + Sbjct: 245 NGDELIEEISSAYSR---DGMEETMIISRSNKRATIYNNGIRN 284 >UniRef50_A5ZS54 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5ZS54_9FIRM Length = 2375 Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust. Identities = 60/234 (25%), Positives = 104/234 (44%), Gaps = 30/234 (12%) Query: 916 DLLYVDVAKGYGTGLLVSRASYEAE----KSILR-HILEGKEA-VMPLMERVPGELMEKL 969 D+++ D + G +R S++AE +++R H+ G V ++ ++ E L Sbjct: 1909 DMIHTDGSLVCHDGGFYTRKSFQAELGAAAALVRLHMQTGMAVNVDRILRKIQKEQDIIL 1968 Query: 970 TSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRA 1029 + Q+ A + + E + +++ G G GKTT R +++ L + ++ PT A Sbjct: 1969 NAKQQVAVKNVFE--NPISIITGGPGRGKTTVIRFIIAVQEAL--DKNAVILLCAPTGIA 2024 Query: 1030 VGEMRSAGVDAQTLASFLHDT-QLQQRSGE--------TPDFSNTLFLLDESSMVGNTDM 1080 MR + A +H + L +GE PD L + DE SMV DM Sbjct: 2025 RRRMREC---TEYPALTIHKSIGLTGEAGEEEWKNEQPIPD---DLIIADEFSMV---DM 2075 Query: 1081 ARAYALIAA--GGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQ 1132 A L ++ G R V GD DQ++++ PG+ F+ V ++ E RQ Sbjct: 2076 YLADKLFSSIKSGARLVLVGDKDQIESVGPGKVFQEIIDSGVFPVTVLDECFRQ 2129 >UniRef50_D2S7J1 Helicase, RecD/TraA family n=15 Tax=Actinomycetales RepID=D2S7J1_9ACTO Length = 754 Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust. Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 23/155 (14%) Query: 968 KLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTH 1027 +L +GQ+AA R+ L ++R V+ G G GK+ R++++ L ++ R+V PT Sbjct: 336 ELAAGQQAAVRLAL--TERVAVLTGGPGCGKSFTVRSIVT----LAAAKGARIVLAAPTG 389 Query: 1028 RAVGEMRS-AGVDAQTLASFLHDTQLQQRSGETPDFSNT------LFLLDESSMVGNTDM 1080 RA + GV+A T+ L + R G F L ++DESSM+ D+ Sbjct: 390 RAAKRLTELTGVEAVTVHRLL-----ELRPGGDAAFDRDRPLEADLVVVDESSML---DL 441 Query: 1081 ARAYALIAA--GGGRAVASGDTDQLQAIAPGQPFR 1113 A L+ A G + GD DQL ++ G+ R Sbjct: 442 LLANKLVRAVPPGAHLLLVGDVDQLPSVGAGEVLR 476 >UniRef50_C2E8D7 Exodeoxyribonuclease V alpha chain n=1 Tax=Lactobacillus ruminis ATCC 25644 RepID=C2E8D7_9LACO Length = 795 Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust. Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 3/90 (3%) Query: 1025 PTHRAVGEMRSA-GVDAQTLASFLHDTQLQQRSGETPDFSN-TLFLLDESSMVGNTDMAR 1082 PT RA +M +A G+DA T+ L T + S D+ N TL ++DESSMV +T++ Sbjct: 389 PTGRAAQKMANATGMDASTIHHLLGITGGNEISANDLDYLNGTLLIIDESSMV-DTELMH 447 Query: 1083 AYALIAAGGGRAVASGDTDQLQAIAPGQPF 1112 + + GD +QL ++ PG+ F Sbjct: 448 MLLSCIPDSMQVIFCGDKNQLPSVGPGRVF 477 >UniRef50_D0LH80 Helicase, RecD/TraA family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LH80_HALO1 Length = 768 Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust. Identities = 54/172 (31%), Positives = 76/172 (44%), Gaps = 19/172 (11%) Query: 973 QRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGE 1032 +RAA ++ D+ V+ G GVGKTT RA++ L S V PT RA Sbjct: 367 RRAALAAVM---DKSVVLTGGPGVGKTTIVRAIVFLFERLGRS----VTLAAPTGRAAKR 419 Query: 1033 M-RSAGVDAQTLASFLHDTQLQQ------RSGETPDFSNTLFLLDESSMVGNTDMARAYA 1085 + S DA T+ L + Q RS + P + + ++DE+SMV +A Sbjct: 420 LAESTARDAATIHRLL---EFQPAGGGFFRSADNP-LDSDVVIIDETSMVDIALLAALLD 475 Query: 1086 LIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELR 1137 + A + V GD DQL ++ PG AA V + EI RQ E R Sbjct: 476 AMPASA-QLVLVGDIDQLPSVGPGAVLADLIASRAATVVRLTEIFRQARESR 526 >UniRef50_A1SFN3 ATP-dependent exoDNAse (Exonuclease V) alpha subunit-helicase superfamily I member-like n=2 Tax=Nocardioides sp. JS614 RepID=A1SFN3_NOCSJ Length = 872 Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust. Identities = 47/139 (33%), Positives = 63/139 (45%), Gaps = 22/139 (15%) Query: 987 FTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA--GVDAQTLA 1044 VV+G AG GKTT RA L R+V + PT +A E+ +A G D ++ A Sbjct: 454 LVVVEGAAGAGKTTALRATRE----LLARHGHRLVVVTPTLKAA-EVAAAETGADGRSAA 508 Query: 1045 SFLH--------DTQLQQRSGETPDFS-----NTLFLLDESSMVGNTDMARAYALIA-AG 1090 +H D +R TPD + L L+DE+ M+ + D ARA IA Sbjct: 509 WLIHQHGWRWDADGHWARRPDTTPDAAARLRPGDLLLIDEAGML-DQDTARALLTIADEA 567 Query: 1091 GGRAVASGDTDQLQAIAPG 1109 G R GD QL A+ G Sbjct: 568 GARVALVGDRHQLPAVGRG 586 Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust. Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 9/102 (8%) Query: 1338 RVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLA 1397 R+G GDR+ ++D + G WT D + G+ + P E A + ++LA Sbjct: 702 RIGVGDRVATRRNDPDLGVANRQTWTAIGFGEDGSLVLRGRGRDRVVP-TEYANRFVELA 760 Query: 1398 YAITAHGAQGASETFA-IALEGTEGNRKLMAGFESAYVALSR 1438 YA T HGAQG + A +A+ T G +AYVA++R Sbjct: 761 YATTVHGAQGETVDRAHVAIGDT-------TGAAAAYVAMTR 795 Score = 43.1 bits (100), Expect = 0.093, Method: Compositional matrix adjust. Identities = 50/174 (28%), Positives = 79/174 (45%), Gaps = 9/174 (5%) Query: 21 DNYYVLGSMG--ERWAGRGAEQLGLQGSVDKDVFTRLLEG-RLPDGADLSRMQDGSNRHR 77 D+YY+ G ER A G GS+D D + + + G + G R+++ +N R Sbjct: 27 DDYYLGEGTGVAERLTATPAGVAG-AGSMDGDEYEQWVAGIDIDTGCKKGRVREDANALR 85 Query: 78 PGYDLTFSAPKSVSMMAMLGGD--KRLIDAHNQAVDFAVRQVEALASTRVMTDGQSETVL 135 ++T + PK+ S+ A L + + L A ++A + V + A+TRV G+ V Sbjct: 86 -FVEVTVNGPKTWSLAAALHPEVSEALDGAQDRAAEQIVGWLALHATTRVGPRGRQVQVP 144 Query: 136 TGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDKVGKTGFIENV 189 + A+ H TSR +P H H V G W+ L S VG IE + Sbjct: 145 VERIEAAVIRHYTSRAGDPHRHLHLQVNARVFAAGAWRGLHS--VGVRDMIEAI 196 >UniRef50_A8L8Y0 TrwC relaxase n=1 Tax=Frankia sp. EAN1pec RepID=A8L8Y0_FRASN Length = 1549 Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust. Identities = 49/192 (25%), Positives = 82/192 (42%), Gaps = 35/192 (18%) Query: 79 GYDLTFSAPKSVSMMAMLGGD---KRLIDAHNQAVDFAVRQVEALASTRVMTDGQSETVL 135 G+D+ + PKS+S++ + G D + + ++ N AVD +E A+ + M ++ L Sbjct: 287 GFDVVCAVPKSLSLLWVFGDDELRRDIENSMNAAVDAVFTYLERHAA-QGMVGSRNHPGL 345 Query: 136 TGNLVMALFNHDTSRDQEPQLHTHAVVAN-----VTQHNG------------EWKTLSSD 178 L A + HD SR E LH H +VAN V G EW+ L S+ Sbjct: 346 --GLAAASYLHDVSRADEAHLHIHNIVANAVAIPVLDETGRPERDPVGGARVEWRALDSE 403 Query: 179 KVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVE---AFS 235 F+ + + R +L + T ++G+ E+ P E AFS Sbjct: 404 L-----FLAHARTAGFVGAAVLRHELARRRGV----TWAPVRNGVAELEDFPTELLAAFS 454 Query: 236 GRSQTIREAVGE 247 R ++E +G+ Sbjct: 455 TRHGQVQEELGQ 466 >UniRef50_Q30PF5 ATPase n=2 Tax=Campylobacterales RepID=Q30PF5_SULDN Length = 745 Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust. Identities = 44/169 (26%), Positives = 79/169 (46%), Gaps = 11/169 (6%) Query: 968 KLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGL-GPT 1026 KL Q+ A + I E S +V GYAG GK+T R+++ +N + + L G Sbjct: 311 KLGDEQKEALKKINEGSSILFLV-GYAGTGKSTTSRSILDLLNTKYDKKEIITCALSGIA 369 Query: 1027 HRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYAL 1086 + + + + G ++ T+ S L + ++R +F ++ L+DE+SM+ ++ AR Sbjct: 370 SQRIAD--TTGYESATIQSLL--VKFEERD----EFPYSVVLIDEASMINSSLFARLVRK 421 Query: 1087 IAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPE 1135 ++ V GD QL I G T A + + +I RQ+ + Sbjct: 422 VSKSALLIVV-GDDAQLPPIGAGNVLSDVLTLCLAPIVKLTKIYRQSED 469 >UniRef50_B4WK60 Putative uncharacterized protein n=2 Tax=Synechococcus sp. PCC 7335 RepID=B4WK60_9SYNE Length = 410 Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust. Identities = 41/138 (29%), Positives = 64/138 (46%), Gaps = 15/138 (10%) Query: 1313 EGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDS- 1371 +G I+P A + T+Y I V GD +R+T ++R +TV V +S Sbjct: 5 DGQLMKINP--ARCQRKTVYAVQKIAVAKGDHLRWTCNNRAAKVRNGQRFTVVDVDSNSN 62 Query: 1372 -VTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIAL-EGTEGNRKLMAGF 1429 ++D +I + +Q+ID A T + +QG + +AL +GT Sbjct: 63 AQIVNDRGNCSQINL---RGQQYIDYALVSTTYSSQGKTADRVLALMDGTTSR------- 112 Query: 1430 ESAYVALSRMKQHVQVYT 1447 ES YVA SR K H+ +YT Sbjct: 113 ESFYVAASRAKHHLSIYT 130 >UniRef50_C0VHS0 Exonuclease V alpha subunit n=7 Tax=Acinetobacter RepID=C0VHS0_9GAMM Length = 601 Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust. Identities = 94/376 (25%), Positives = 168/376 (44%), Gaps = 80/376 (21%) Query: 929 GLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGE-LMEKLTSGQRAATRMILETSDRF 987 GL + R ++ E+ + + I K + P+++ E L+E Q+AA +M+L+ Sbjct: 107 GLALYR-YWQLEQRLAQQICRLKRQMTPVIDISEYESLLED--EFQQAALKMVLQ--QWV 161 Query: 988 TVVQGYAGVGKTTQFRAVMSAVN-MLPESERPRVVGLGPTHRAVGEMRSA----GVDAQT 1042 +++ G G GKT +++A+N M+P+ R+ PT +A M+ A D + Sbjct: 162 SIITGGPGTGKTYTLARIIAALNQMIPDI---RIAMAAPTGKAAQRMQEALQNSFNDPKL 218 Query: 1043 LASFLHDTQLQQRSGET------------PDFS------NTLFLLDESSMVGNTDMARAY 1084 +AS L +L+ +S +T P F+ + ++DE+SM+ D+ A Sbjct: 219 IASGLVTDELRNQSTQTLHRLLGMGNRQIPRFNVKQPLPYDVIVVDEASML---DLNLAT 275 Query: 1085 ALIAA--GGGRAVASGDTDQLQAIAPGQPF--------------RLQQTRSAADVAIMKE 1128 AL A R + GD +QL ++ G +LQ +R +D A + + Sbjct: 276 ALFEAVPDSCRIILLGDANQLASVDVGSVLADLQQVEGLAENRVQLQNSRRFSDKAKIGQ 335 Query: 1129 IVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWA---PEHSVTEFSHSQ-E 1184 + R + + S++ + +E E VKP+ P QE + + P+ E+ Q + Sbjct: 336 LARFIQAQQASSESVLTQ-LEH-----EIVKPA--PLQEMSLSKEMPDAIQLEYLPEQLD 387 Query: 1185 AKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYT-GRTPEAREQTLIVTHLNEDRRVLNSM 1243 ++ + QQK M F D Y I++ Y PE Q +I + +D R+L ++ Sbjct: 388 IEIEQYQQKLMY---GFND-----YAEILKSYLHADQPEQYIQDVI--RVFDDYRILAAV 437 Query: 1244 IHDVREKAGELGKEQV 1259 H G LG EQ+ Sbjct: 438 KH------GALGIEQL 447 >UniRef50_C7XTE9 Exodeoxyribonuclease V, alpha subunit n=1 Tax=Lactobacillus coleohominis 101-4-CHN RepID=C7XTE9_9LACO Length = 833 Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust. Identities = 38/117 (32%), Positives = 58/117 (49%), Gaps = 14/117 (11%) Query: 1005 VMSAVNMLPESERPRVVGLGPTHRAVGEMRSA-GVDAQTLASFL------HDTQLQQRSG 1057 V + + + P+ ++ + PT RA ++ S G++A T+ L +D QL Q Sbjct: 386 VETYLKLHPKLSEEDIMLVAPTGRAAKQINSVTGIEASTIHRLLGLTADINDDQLMQMDF 445 Query: 1058 ETPDFSNTLFLLDESSMVGNTDMARAYALIAA--GGGRAVASGDTDQLQAIAPGQPF 1112 + D L ++DE SM T +A ALI+A G V GD DQL ++ PGQ F Sbjct: 446 DPLD--AKLLIVDEMSM---TSLALFTALISAVNQGTHLVLVGDCDQLPSVGPGQVF 497 >UniRef50_A4B916 Exodeoxyribonuclease V, alpha subunit n=1 Tax=Reinekea blandensis MED297 RepID=A4B916_9GAMM Length = 583 Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust. Identities = 63/213 (29%), Positives = 85/213 (39%), Gaps = 42/213 (19%) Query: 931 LVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKL----------TSGQRAATRMI 980 L R ++ E I R + +PL E ++ KL + QR A Sbjct: 100 LYLRRYWQFETEIARFLKRSTTGALPLTEAQVRDVRNKLDQYFPLEDNRFNWQRCAAVNC 159 Query: 981 LETSDRFTVVQGYAGVGKT---TQFRAVMSAVNMLPESERPRVVGLG-PTHRAVGEMRSA 1036 L D V+ G G GKT T+ A++SAV S+ P ++ L PT +A G + A Sbjct: 160 L--LDPTHVIIGGPGTGKTYTVTRILALLSAV-----SDTPPIIRLAAPTGKAAGRLAEA 212 Query: 1037 GVDA------------------QTLASFLH--DTQLQQRSGETPDFSNTLFLLDESSMVG 1076 DA QTL L QLQ R + + L+DE SMV Sbjct: 213 INDAKRELNLDLIDAGAIPDSAQTLHRLLGVIPNQLQFRHHQEHPIEADILLIDEVSMVD 272 Query: 1077 NTDMARAYALIAAGGGRAVASGDTDQLQAIAPG 1109 MAR IA R + GD DQL ++A G Sbjct: 273 LPMMARLTRAIAP-HTRVILLGDADQLPSVAAG 304 >UniRef50_C9CRW1 TraI n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9CRW1_9RHOB Length = 250 Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust. Identities = 44/161 (27%), Positives = 73/161 (45%), Gaps = 13/161 (8%) Query: 1307 ITLQDAEGNTRLISPREA------VAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANS 1360 IT+ E + I P EA + + + Y P+ V GD++RF +D+E G + N Sbjct: 12 ITVTHEETGEKSILPLEAKFNRRELGKSLVAYDPEQREVAAGDQVRFRITDKESG-ITNG 70 Query: 1361 VWTVTAVSGDSVTLSDGQQTREIRPG-QEQAEQHIDLAYAITAHGAQGAS-ETFAIALEG 1418 + V + V + GQ I A + ++ YA TAH QG S + IA+ Sbjct: 71 LRAVINSTSGGVIEATGQDGSNISLTINSVAARGLEHDYAATAHAVQGESVDRVIIAMRS 130 Query: 1419 TEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINN 1459 TE +A ++ YV +SR + + TD+ + + I + Sbjct: 131 TE----RLATQKAFYVEISRARDEAVLLTDDPEKLSKTIED 167 >UniRef50_C8NA26 Probable exonuclease V, alpha subunit n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NA26_9GAMM Length = 606 Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust. Identities = 59/193 (30%), Positives = 86/193 (44%), Gaps = 21/193 (10%) Query: 927 GTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDR 986 G L +SR +Y+ E + + E A E +P + L + Q+ A R L S R Sbjct: 71 GDRLWISR-NYQQEARLAAMLRERLHAADTPAEPIPAD---GLRAEQQNAIR--LARSRR 124 Query: 987 FTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMR----SAGVD--- 1039 ++ G G GKT ++ A + R+ PT +A M +AGV Sbjct: 125 LALINGGPGTGKTYTIARLIHAEQQ--ADPKIRIALAAPTGKAAKRMEESLAAAGVQDLP 182 Query: 1040 AQTLASFLH-DTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGG--RAVA 1096 AQTL L T Q R + + L ++DE+SM+ + A+ALIAA R + Sbjct: 183 AQTLHRLLGIGTDGQARYHMSRHLPHDLIIIDEASMLS---LELAHALIAATATDTRLIL 239 Query: 1097 SGDTDQLQAIAPG 1109 GD DQL A+ PG Sbjct: 240 LGDADQLAAVEPG 252 >UniRef50_Q83YK2 Putative uncharacterized protein n=1 Tax=Bifidobacterium longum RepID=Q83YK2_BIFLO Length = 1387 Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust. Identities = 77/321 (23%), Positives = 122/321 (38%), Gaps = 64/321 (19%) Query: 55 LLEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAV-DFA 113 LL+GR PD +L + N Y++ + K + + +++ GD R QA + A Sbjct: 83 LLDGRDPDSGELLKSFRAGNVR--AYEIPLNDSKDLDVASVVYGDVREARMKAQARGEEA 140 Query: 114 VRQV--EALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGE 171 VR+ E L DG+ V ++ H TSR +P+LH H + N + E Sbjct: 141 VRRFLAERLTVRLRCGDGRRRWVRPDEVMFVSATHFTSRAGDPELHRHLELINRVRVGDE 200 Query: 172 WKTLSSDKV-GKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMP--G 228 W ++ S ++ G I +VY + +G L + + A G ++ G+ +P G Sbjct: 201 WYSIDSSRLFGMYENIRSVYETTV-YGDA---GLCDAMAAHGMTLDMQGR-----VPELG 251 Query: 229 VPVEAFSGRSQTIREAVGE----------DASLKSRD----------------------- 255 + FS R I + E D + RD Sbjct: 252 NASDVFSKRRDAINARMAELVDEWRAAHADGMRRVRDPETGDVVGMVGYGTVAEPDERTL 311 Query: 256 -----VAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRD--AADQRADLRTLTPGP 308 A DTR++K + + W + L+ G+DI A D AAD R P Sbjct: 312 MRLRLQAWADTRQAKGRWNTRVDYGAWNEELRAAGYDIPAMLDGAAADPR-------PRA 364 Query: 309 ASQDGPDVQQAVTQAIAGLSE 329 V++ AIA L E Sbjct: 365 VGFGADAVRRCAVAAIAALRE 385 >UniRef50_A9KS02 Helicase, RecD/TraA family n=32 Tax=Bacteria RepID=A9KS02_CLOPH Length = 742 Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust. Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 14/123 (11%) Query: 1024 GPTHRAVGEMR-SAGVDAQTLASFLHDTQ-LQQRSGETPDFSNTL-------FLLDESSM 1074 PT RA M+ + G +A T+ L T+ + + G N L ++DE SM Sbjct: 368 APTGRAAKRMKETTGYEASTIHRLLELTKGMDDKDGRMSFERNELNPLEADVIIIDEMSM 427 Query: 1075 VGNTDMARAYALIAA--GGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQ 1132 V D++ ++L+ A G R + GD +QL ++ PG R A V ++K+I RQ Sbjct: 428 V---DISLMHSLLKAITVGTRIILVGDVNQLPSVGPGNVLRDMIESKAFPVVMLKKIFRQ 484 Query: 1133 TPE 1135 E Sbjct: 485 ASE 487 >UniRef50_A3ETY4 Exodeoxyribonuclease V, alpha subunit n=2 Tax=Leptospirillum sp. Group II RepID=A3ETY4_9BACT Length = 575 Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust. Identities = 52/188 (27%), Positives = 83/188 (44%), Gaps = 21/188 (11%) Query: 968 KLTSGQRAATRMILETS--DRFTVVQGYAGVGKTTQFRAVMSAVNML-PESERPRVVGLG 1024 +L SG R +LE + F ++ G G GKT ++ +L PE+ +V Sbjct: 153 RLASGGVEDRRRLLEGALFRPFFLLTGGPGTGKTYTSAEILKVWKILRPEAH---LVVAT 209 Query: 1025 PTHRAVGEMRSA----GVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDM 1080 PT +A R A VD TL L + GE L L+DE SMV + M Sbjct: 210 PTGKAARRFREALSLPEVDVLTLHRLLGISPGGASPGEDRPLVQDLVLVDECSMVDLSLM 269 Query: 1081 ARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQT-PELREA 1139 AR + ++ + GD DQL ++ PG F D+A+ + ++T PE+ + Sbjct: 270 ARLFRALSPETS-VILVGDPDQLSSVGPGSVF--------GDLALAMSVEQKTRPEISRS 320 Query: 1140 VYSLINRD 1147 + ++ R+ Sbjct: 321 -FQVLTRN 327 >UniRef50_D2SC15 TrwC relaxase n=4 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2SC15_9ACTO Length = 1223 Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust. Identities = 36/125 (28%), Positives = 53/125 (42%), Gaps = 31/125 (24%) Query: 1338 RVGTGDRMRFTKSDRERGYVANSVWTVTAV---------SGDSVT--------------- 1373 R+G GDR+ ++DR+ G WTVTA+ GD V Sbjct: 736 RIGVGDRIATRRNDRDLGVANRDTWTVTAIGSHDELVVRCGDPVPTDRAAADVTPSTVDG 795 Query: 1374 LSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAY 1433 ++ Q + + P E H++LAY TAHG QG + A + G G +AY Sbjct: 796 VTPAQAGQRVLP-TEYVTAHVELAYVSTAHGVQGDTVPAAHLVVGEH------TGAAAAY 848 Query: 1434 VALSR 1438 V ++R Sbjct: 849 VGMTR 853 >UniRef50_A5FUD0 ATP-dependent exoDNAse (Exonuclease V) alpha subunit-helicase superfamily I member-like protein n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FUD0_ACICJ Length = 1082 Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust. Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 17/160 (10%) Query: 32 RWAGRGAEQLGLQGSVDK-DVFTRLLEGRL-------PDGADLSRMQDGSNRHRPGYDLT 83 RW GRGA +L L V D+ + +G L P D G+ Y + Sbjct: 51 RWIGRGAAKLELGELVRMPDILAVMRDGVLKRPDPLDPLAPDTEIRLRGAGAEVGFYGVI 110 Query: 84 FSAPKSVSMMAMLGGD-----KRLIDAHNQAVDFAVRQVEALASTRVMTDGQSETVLTGN 138 + PKSVS++ L D + +A A + +E L TR DG + +V Sbjct: 111 LALPKSVSLL--LASDDPAEREAAEEAARVAERVFLETLEGLVRTRTGRDGVN-SVSGDG 167 Query: 139 LVMALFNHDTSRDQEPQLHTHAVVANVTQ-HNGEWKTLSS 177 L+ A F H S +P LH H +++N TQ + W+T+ S Sbjct: 168 LIAASFTHRGSSAGDPHLHVHFMISNSTQGSDYAWRTIDS 207 >UniRef50_D2ELG1 RecD/TraA family helicase n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2ELG1_PEDAC Length = 836 Score = 44.3 bits (103), Expect = 0.043, Method: Compositional matrix adjust. Identities = 62/205 (30%), Positives = 94/205 (45%), Gaps = 42/205 (20%) Query: 937 YEAEKSI---LRHILEG-----KEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFT 988 Y+AE++I L+H+L+ ++AV ++R L + Q A RM L S T Sbjct: 310 YQAEEAIGYQLQHLLKNPPKVNEKAVDRAIKRAEEHLALEYDETQNNAIRMAL--SHGIT 367 Query: 989 VVQGYAGVGKTTQFRAVMSAV----------NMLPESERPRVVGLGPTHRAVGEMRSA-G 1037 ++ G G GKTT + ++++ N P+ + P + PT RA + G Sbjct: 368 IITGGPGTGKTTIVKGLINSFAELHDLDLDPNANPDQDYPIQLA-APTGRAAKRLSEVTG 426 Query: 1038 VDAQTLASFL--------HDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAA 1089 V A+T+ L HD Q+Q+ GE L ++DE SMV D LI+A Sbjct: 427 VPAKTIHRLLGLNGNDDLHDEQIQELRGE-------LLVVDEMSMV---DTGLFNTLISA 476 Query: 1090 GGG--RAVASGDTDQLQAIAPGQPF 1112 + V GD DQL ++ PGQ F Sbjct: 477 INAEMQVVLVGDKDQLPSVGPGQVF 501 >UniRef50_B0B9E0 Exodeoxyribonuclease V alpha chain n=15 Tax=Chlamydiaceae RepID=B0B9E0_CHLT2 Length = 746 Score = 44.3 bits (103), Expect = 0.044, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 73/170 (42%), Gaps = 12/170 (7%) Query: 968 KLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTH 1027 KL Q+ A +S + ++ G G GK+T RA++S + S +++ PT Sbjct: 330 KLEEKQKEALHA--SSSQKIHIISGGPGTGKSTITRAILSIFEKI--SSPKKIILAAPTG 385 Query: 1028 RAVGEMRS-AGVDAQTLASFL-HDTQ-LQQRSGETPDFSNTLFLLDESSMVGNTDMARAY 1084 +A M G QT+ S L +D + L R L ++DES M+ + R Sbjct: 386 KAAKRMTEITGKRTQTIHSLLQYDFKTLSFRKNHEDPIDCDLVIVDESGMIDTILLQR-- 443 Query: 1085 ALIAAGGGRA--VASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQ 1132 +AA A + GD QL ++ PG + +V + +I RQ Sbjct: 444 -FLAALPDHAILILIGDVHQLPSVGPGNVLKDLILSHHIEVTYLTKIFRQ 492 >UniRef50_C5V1Z6 Putative uncharacterized protein n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V1Z6_9PROT Length = 740 Score = 44.3 bits (103), Expect = 0.044, Method: Compositional matrix adjust. Identities = 38/107 (35%), Positives = 54/107 (50%), Gaps = 9/107 (8%) Query: 1339 VGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLS-DGQQTREIRPGQEQAEQHIDLA 1397 V GD + T + + G + VT +S V + DG+ E R E+AE ++LA Sbjct: 604 VAVGDPIVITVNRYKHGLFNGLLGVVTEISEARVQVRFDGES--ESRDLPEEAEGDVELA 661 Query: 1398 YAITAHGAQGAS-ETFAIALEGTEGNRKLMAGFESAYVALSRMKQHV 1443 YAIT H AQG+S T + +E T +A E Y A++R KQ V Sbjct: 662 YAITCHKAQGSSANTVMVLVEATS-----LATREWLYTAVTRAKQLV 703 >UniRef50_C0QEU8 RecD1 n=2 Tax=Desulfobacterales RepID=C0QEU8_DESAH Length = 826 Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust. Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 6/150 (4%) Query: 987 FTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRS-AGVDAQTLAS 1045 F+V+ G G GKTT R ++ + + S V+ PT RA M G +A+T+ Sbjct: 352 FSVLTGGPGCGKTTTTRVLVELIRAMGRS----VLLAAPTGRAAQRMEELIGQEAKTIHR 407 Query: 1046 FLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQA 1105 L R E ++DE SM+ T A + A + V GD+DQL + Sbjct: 408 LLGWQNGSFRKNEKSPLDCDFLIVDECSMLDITLTASLLKAVPA-ACQVVFIGDSDQLPS 466 Query: 1106 IAPGQPFRLQQTRSAADVAIMKEIVRQTPE 1135 + G + ++ + EI RQ E Sbjct: 467 VGAGNVLKDIIASNSVACFRLTEIFRQARE 496 >UniRef50_A1RCJ6 Toprim domain n=5 Tax=Actinomycetales RepID=A1RCJ6_ARTAT Length = 2109 Score = 43.9 bits (102), Expect = 0.059, Method: Compositional matrix adjust. Identities = 45/154 (29%), Positives = 66/154 (42%), Gaps = 26/154 (16%) Query: 1328 GVTLYTPDTIRVGTGDRMRFTKSDRE-----RGYVAN-SVWTVTAVSGD-SVTLSDGQQT 1380 G L D +V GDR+ ++DR +V N W V V+ D S+T+ + Sbjct: 1006 GRVLTLADGTKVSAGDRIITRENDRRLRISRTNWVKNGDRWHVKNVNTDGSLTVIHDKLG 1065 Query: 1381 REIRPGQEQAEQHIDLAYAITAHGAQGASE-TFAIALEGTEGNRKLMAGFESAYVALSRM 1439 + I + + + L YA T HGAQG + T + L G E +R L+ YVALSR Sbjct: 1066 KTITLPADYVSKTVQLGYATTVHGAQGITTGTCHVVLTGDE-DRNLL------YVALSRG 1118 Query: 1440 KQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPK 1473 K +Y N G H++ P+ Sbjct: 1119 KFANHLYL-----------NVASDGDPHNLIRPE 1141 Score = 43.1 bits (100), Expect = 0.098, Method: Compositional matrix adjust. Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 4/98 (4%) Query: 79 GYDLTFSAPKSVSMMAMLGG---DKRLIDAHNQAVDFAVRQVEALASTRVMTDGQSETVL 135 GYDLTF+ KSVS + L K + AH+ AV+ ++ +E G + V Sbjct: 318 GYDLTFAPVKSVSTLWALADRDVAKEIEAAHHAAVEATLKWLEKEVLFTRRGRGGLQQVK 377 Query: 136 TGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ-HNGEW 172 L+ +F H +R +P LHTH V+N Q G W Sbjct: 378 AKGLIAGMFTHRDARSSDPHLHTHVAVSNKVQDETGRW 415 >UniRef50_Q5HXP7 Conjugal transfer protein TraA n=1 Tax=Gluconobacter oxydans RepID=Q5HXP7_GLUOX Length = 1067 Score = 43.5 bits (101), Expect = 0.070, Method: Compositional matrix adjust. Identities = 65/265 (24%), Positives = 103/265 (38%), Gaps = 42/265 (15%) Query: 5 AQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSV--DKDVFTRLLEGRLPD 62 +Q S +YYT +D GS + R A QLG+ + + RL EG+ D Sbjct: 40 SQFESGDRLNSYYTGRD---ARGSWAPDMSERIASQLGIDVTTRPTDEALARLFEGKRAD 96 Query: 63 GADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKR----LIDAHNQAVDFAVRQVE 118 + +NR G D T + KSV++ A K + A +QA D A+ + Sbjct: 97 TGE-KWAGAHANREISGIDFTAAPDKSVTLAAEFASTKAEEALIWSAIHQANDRAMAFIA 155 Query: 119 ALASTRVMTDGQSETVLTGNLVMALFNHDTSRD--------------------QEPQLHT 158 G G++ F H T+R +PQ H Sbjct: 156 KEIGIARRGKGGVSYNEGGDVGWVSFRHYTARPVMKIQDGAQGPTAAVEVLVPGDPQAHI 215 Query: 159 HAVVAN-VTQHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEV 217 H ++ N V +G +L S +V TG ++ FG ++ +L ++ LG +V Sbjct: 216 HNIMFNAVATESGHLGSLDSKRV--TGMTSHM------FGGYFQAELASELRKLGIRVDV 267 Query: 218 VGKHGMWEMPGVPVEA---FSGRSQ 239 + + G+P EA FS RS+ Sbjct: 268 DARGKAVVLNGIPEEARELFSKRSK 292 >UniRef50_Q2J7P7 Putative uncharacterized protein n=1 Tax=Frankia sp. CcI3 RepID=Q2J7P7_FRASC Length = 1520 Score = 43.5 bits (101), Expect = 0.075, Method: Compositional matrix adjust. Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 2/89 (2%) Query: 79 GYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEALASTRVMTDGQSETVLTGN 138 GYD+T SAPKSVS++ GD+ + A+D V V + G Sbjct: 239 GYDVTCSAPKSVSLLWAF-GDEEIRRDVAAAMDAGVEAVLGYLERHATVGTVAGRNRPGV 297 Query: 139 LVMAL-FNHDTSRDQEPQLHTHAVVANVT 166 V A+ + H+ SR E LH H++V N T Sbjct: 298 GVAAVSYPHEVSRSDEAHLHVHSIVVNAT 326 >UniRef50_A6YFT0 Putative TraA n=1 Tax=Arthrobacter sp. Chr15 RepID=A6YFT0_9MICC Length = 1097 Score = 43.5 bits (101), Expect = 0.075, Method: Compositional matrix adjust. Identities = 34/99 (34%), Positives = 47/99 (47%), Gaps = 9/99 (9%) Query: 1314 GNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGD-SV 1372 G TR + A +G+TL DTI D M G +TV D S+ Sbjct: 743 GRTREARFKIAGVDGLTLRHGDTIMTRNNDTML--------GVANRETYTVHTTHSDGSI 794 Query: 1373 TLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASET 1411 T++ G+ IR +E Q++ L YA T +GAQGA+ET Sbjct: 795 TVNQGKGKDMIRLPKEYVTQYVHLGYASTEYGAQGATET 833 >UniRef50_A5N3G4 Predicted exodeoxyribonuclease n=26 Tax=Clostridium RepID=A5N3G4_CLOK5 Length = 750 Score = 43.5 bits (101), Expect = 0.086, Method: Compositional matrix adjust. Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 8/138 (5%) Query: 1005 VMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGV-DAQTLASFLH------DTQLQQRSG 1057 +++ + L E +V+ PT RA M A +A+T+ L D L G Sbjct: 349 IINCMIQLFEKSNLKVLMAAPTGRAAKRMSEATKREAKTIHRLLEIGVESDDEALFFSRG 408 Query: 1058 ETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQT 1117 E + ++DE+SM+ M I+ R + GD++QL ++ PG R Sbjct: 409 EESPLQCDVVIIDEASMIDIVMMNNLLKAISLKT-RLIIVGDSEQLPSVGPGNVLRDLID 467 Query: 1118 RSAADVAIMKEIVRQTPE 1135 V +KEI RQ+ E Sbjct: 468 SRCIKVVRLKEIFRQSRE 485 >UniRef50_A0LD23 Helicase, RecD/TraA family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LD23_MAGSM Length = 742 Score = 43.1 bits (100), Expect = 0.090, Method: Compositional matrix adjust. Identities = 60/205 (29%), Positives = 92/205 (44%), Gaps = 20/205 (9%) Query: 937 YEAEKSILRHI--LEGKEAVMPL----MERVP-GELMEKLTSGQRAATRMILETSDRFTV 989 ++ EK I HI L G + + +ERV G L+ QR A + I T D+ + Sbjct: 305 HDYEKQIAYHISRLHGPSPIETISDGWIERVSRGHF--SLSVDQRQALKTI--TQDKVAI 360 Query: 990 VQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGL-GPTHRAVGEMRSA-GVDAQTLASFL 1047 + G G+GKTT R V+ E + V L PT RA ++ A G A T+ + Sbjct: 361 LTGGPGMGKTTITRYVIEHA-----VENKQTVKLCAPTGRAAKQLAEATGEVALTIHRLM 415 Query: 1048 HDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIA 1107 + G+ F L ++DESSM+ + MA + + R + GD DQL ++A Sbjct: 416 GKGSDESVDGQR-KFECDLLVVDESSMM-DEWMASSLLQMLPDHCRLLLVGDADQLPSVA 473 Query: 1108 PGQPFRLQQTRSAADVAIMKEIVRQ 1132 G+ + VA + E+ RQ Sbjct: 474 AGRVLQDLIQSGVVPVARLTEVHRQ 498 >UniRef50_A0R7T4 ATPase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A0R7T4_PELPD Length = 686 Score = 43.1 bits (100), Expect = 0.096, Method: Compositional matrix adjust. Identities = 53/186 (28%), Positives = 81/186 (43%), Gaps = 17/186 (9%) Query: 986 RFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRS-AGVDAQTLA 1044 R V GYAG GK+T +A++ +L + + +V + + A +R+ +G ++ T+ Sbjct: 262 RTIAVTGYAGTGKSTVSKALIQL--LLSKFDEDQVCCMALSGIASDRIRTLSGFNSFTIH 319 Query: 1045 SFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVA--SGDTDQ 1102 S L + G + +LDE SMV + M LI A AV GD Q Sbjct: 320 SALGWRGQEFEHGPDNQLGYQVIVLDEGSMVNSFIMRN---LIEAVDRDAVLILMGDPGQ 376 Query: 1103 LQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQ 1162 L I G PFR VA + I RQ+ ++V S D+ R V P+ Sbjct: 377 LPPIGAGDPFRNIIESGIIPVARLTRIYRQSD---DSVLSFFANDIRRG------VVPTG 427 Query: 1163 VPRQEG 1168 ++EG Sbjct: 428 YLQEEG 433 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P22706 Protein traI n=96 Tax=root RepID=TRAI2_ECOLX 2077 0.0 UniRef50_D2U4N9 Conjugal transfer nickase/helicase (Fragment) n=... 1519 0.0 UniRef50_D1S139 Protein TraI n=1 Tax=Serratia odorifera 4Rx13 Re... 1475 0.0 UniRef50_B6ICH5 TraI protein n=1 Tax=Escherichia coli SE11 RepID... 1430 0.0 UniRef50_B2VB36 TraI protein n=1 Tax=Erwinia tasmaniensis RepID=... 1091 0.0 UniRef50_A4WGU6 ATP-dependent exoDNAse (Exonuclease V) alpha sub... 1063 0.0 UniRef50_C8QEC8 Conjugative transfer relaxase protein TraI n=2 T... 1034 0.0 UniRef50_B6ESZ2 Protein TraI (DNA helicase I) n=1 Tax=Aliivibrio... 978 0.0 UniRef50_Q8D674 ATP-dependent exoDNAse, alpha subunit n=14 Tax=V... 975 0.0 UniRef50_D0Z588 IncF plasmid conjugative transfer DNA-nicking an... 972 0.0 UniRef50_D1RMM7 Conjugative transfer relaxase protein TraI n=2 T... 970 0.0 UniRef50_A9L6G5 Conjugative transfer relaxase protein TraI n=7 T... 961 0.0 UniRef50_C9NPT5 Putative conjugative transfer protein TraI n=1 T... 933 0.0 UniRef50_B0RKM2 Mobilization protein TraI n=3 Tax=Yersinia RepID... 644 0.0 UniRef50_B2JAG8 ATP-dependent exoDNAse (Exonuclease V) alpha sub... 532 e-149 UniRef50_B1X3A0 Putative TrwC/TraI protein n=2 Tax=Cyanothece Re... 530 e-148 UniRef50_Q8YK83 Alr8034 protein n=2 Tax=Nostoc RepID=Q8YK83_ANASP 522 e-146 UniRef50_B1XRA4 DNA helicase, TrwC and TraI like protein n=1 Tax... 496 e-138 UniRef50_C1F5K2 Conjugative relaxase domain protein n=4 Tax=Acid... 495 e-138 UniRef50_B4WV74 TrwC relaxase family n=4 Tax=Synechococcus sp. P... 493 e-137 UniRef50_UPI00016C3594 TrwC protein n=1 Tax=Gemmata obscuriglobu... 488 e-135 UniRef50_A8ZPV0 Putative uncharacterized protein n=1 Tax=Acaryoc... 486 e-135 UniRef50_C0A2R1 Conjugative relaxase domain protein n=2 Tax=Opit... 474 e-131 UniRef50_Q5WRX6 Putative uncharacterized protein n=1 Tax=Legione... 471 e-130 UniRef50_C7PJH8 Conjugative relaxase domain protein n=1 Tax=Chit... 471 e-130 UniRef50_A8ZNG7 Putative uncharacterized protein n=2 Tax=Acaryoc... 470 e-130 UniRef50_Q5ZTT4 TraI n=1 Tax=Legionella pneumophila subsp. pneum... 465 e-129 UniRef50_B7KMV0 Conjugative relaxase domain protein n=1 Tax=Cyan... 458 e-126 UniRef50_Q30Q32 ATP-dependent exoDNAse (Exonuclease V) alpha sub... 452 e-125 UniRef50_B5JHM8 TrwC relaxase family n=1 Tax=Verrucomicrobiae ba... 443 e-122 UniRef50_B1ZY28 Conjugative relaxase domain protein n=1 Tax=Opit... 438 e-121 UniRef50_B8GZQ5 DNA relaxase/conjugal transfer nickase-helicase ... 438 e-121 UniRef50_Q0HXX9 TrwC protein n=1 Tax=Shewanella sp. MR-7 RepID=Q... 436 e-120 UniRef50_A0B527 TrwC protein n=3 Tax=Burkholderiales RepID=A0B52... 433 e-119 UniRef50_B8HZ01 Conjugative relaxase domain protein n=1 Tax=Cyan... 433 e-119 UniRef50_A4LST4 TrwC protein n=10 Tax=Proteobacteria RepID=A4LST... 433 e-119 UniRef50_Q2NKF7 TrwC protein n=6 Tax=Proteobacteria RepID=Q2NKF7... 431 e-118 UniRef50_C5ANZ1 TrwC protein n=2 Tax=Burkholderia glumae BGR1 Re... 431 e-118 UniRef50_Q9X4G2 Mobilization protein TraI n=10 Tax=root RepID=Q9... 430 e-118 UniRef50_D2QCL6 Conjugative relaxase domain protein n=1 Tax=Spir... 427 e-117 UniRef50_UPI00016ACDBF TrwC protein n=1 Tax=Burkholderia thailan... 426 e-117 UniRef50_C9CRW2 TraI n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9... 422 e-116 UniRef50_A8ZL36 Putative uncharacterized protein n=2 Tax=Acaryoc... 420 e-115 UniRef50_Q3SHW0 TrwC protein n=1 Tax=Thiobacillus denitrificans ... 420 e-115 UniRef50_B1X2J5 Putative TrwC/TraI protein n=1 Tax=Cyanothece sp... 418 e-115 UniRef50_A5VG54 Conjugative relaxase region-like protein n=2 Tax... 416 e-114 UniRef50_A3ZVN0 Putative uncharacterized protein n=1 Tax=Blastop... 410 e-112 UniRef50_UPI00016C4B0F TrwC protein n=1 Tax=Gemmata obscuriglobu... 399 e-109 UniRef50_A9KH87 DNA helicase n=9 Tax=Coxiella burnetii RepID=A9K... 397 e-108 UniRef50_Q2NBK6 TrwC protein n=7 Tax=Sphingomonadales RepID=Q2NB... 391 e-106 UniRef50_A3VN00 TrwC protein n=1 Tax=Parvularcula bermudensis HT... 391 e-106 UniRef50_A8ZLG3 Putative uncharacterized protein n=3 Tax=Acaryoc... 389 e-106 UniRef50_Q0KJG8 DNA helicase n=3 Tax=Sphingomonadaceae RepID=Q0K... 385 e-105 UniRef50_D0SGZ5 TrwC protein n=1 Tax=Acinetobacter johnsonii SH0... 380 e-103 UniRef50_B2TH74 Conjugative relaxase domain protein n=1 Tax=Burk... 378 e-102 UniRef50_Q1N8W9 TrwC protein n=1 Tax=Sphingomonas sp. SKA58 RepI... 376 e-102 UniRef50_D0KZB2 Conjugative relaxase domain protein n=1 Tax=Halo... 374 e-101 UniRef50_C7HYW1 Conjugative relaxase domain protein n=1 Tax=Thio... 372 e-101 UniRef50_A3EUE2 Probable TrwC protein n=2 Tax=Leptospirillum sp.... 371 e-100 UniRef50_B6AM13 Putative uncharacterized protein n=1 Tax=Leptosp... 369 e-100 UniRef50_Q1NH26 Putative uncharacterized protein n=1 Tax=Sphingo... 368 e-99 UniRef50_A9I2Z2 Conjugal transfer protein n=1 Tax=Bordetella pet... 358 2e-96 UniRef50_C5SIG5 Conjugative relaxase domain protein n=1 Tax=Asti... 353 3e-95 UniRef50_A6Q5N5 Putative uncharacterized protein n=1 Tax=Nitrati... 351 2e-94 UniRef50_A3ZP08 Putative uncharacterized protein n=1 Tax=Blastop... 351 2e-94 UniRef50_B6ASB0 Conjugal transfer protein, TraA n=6 Tax=Leptospi... 349 7e-94 UniRef50_B6ALF3 Putative mobilization protein TraA n=1 Tax=Lepto... 339 9e-91 UniRef50_Q3HKI6 TraI n=2 Tax=Rhodobacteraceae RepID=Q3HKI6_RHOS4 327 2e-87 UniRef50_B1ZQ33 Conjugative relaxase domain protein n=2 Tax=Opit... 316 4e-84 UniRef50_UPI00016C53CF TrwC protein n=1 Tax=Gemmata obscuriglobu... 295 7e-78 UniRef50_C6DZ94 Conjugative relaxase domain protein n=1 Tax=Geob... 294 3e-77 UniRef50_B3DCU7 Relaxase n=2 Tax=Burkholderia multivorans ATCC 1... 287 4e-75 UniRef50_Q3SI89 Putative ATP-dependent exoDNAse (Exonuclease V) ... 287 4e-75 UniRef50_D1BL70 TrwC relaxase n=1 Tax=Veillonella parvula DSM 20... 285 2e-74 UniRef50_B9MIL4 Conjugative relaxase domain protein n=1 Tax=Diap... 282 1e-73 UniRef50_C7CNC3 Putative uncharacterized protein n=1 Tax=Methylo... 275 8e-72 UniRef50_Q44349 Conjugal transfer protein traA n=12 Tax=Rhizobia... 270 5e-70 UniRef50_A5ESN8 Putative ATP-dependent exoDNAse n=1 Tax=Bradyrhi... 267 2e-69 UniRef50_A4JFK5 ATP-dependent exoDNAse (Exonuclease V) alpha sub... 267 3e-69 UniRef50_B2FKA4 Putative conjugal transfer protein TraA n=1 Tax=... 267 3e-69 UniRef50_C5A9A9 Putative ATP-dependent exoDNAse (Exonuclease V) ... 262 1e-67 UniRef50_Q0BRZ0 TraI protein (DNA helicase I) n=1 Tax=Granulibac... 258 1e-66 UniRef50_B2I3X3 TrwC protein n=1 Tax=Acinetobacter baumannii ACI... 255 1e-65 UniRef50_A8ZPA5 TrwC protein, putative n=1 Tax=Acaryochloris mar... 253 5e-65 UniRef50_C0E195 Putative uncharacterized protein n=1 Tax=Coryneb... 248 2e-63 UniRef50_P55418 Probable conjugal transfer protein traA n=16 Tax... 247 4e-63 UniRef50_A1RCJ2 Putative TraA-like conjugal transfer protein n=1... 245 1e-62 UniRef50_D0YT16 DNA primase catalytic core n=1 Tax=Mobiluncus mu... 245 1e-62 UniRef50_Q7CW18 Conjugation protein n=8 Tax=Bacteria RepID=Q7CW1... 245 2e-62 UniRef50_B5YII1 Putative uncharacterized protein n=1 Tax=Thermod... 238 2e-60 UniRef50_B1MAE8 TraA/ATP-dependent exoDNAse/relaxase n=9 Tax=Myc... 238 2e-60 UniRef50_Q84GD9 TraA n=5 Tax=Corynebacterium glutamicum RepID=Q8... 237 3e-60 UniRef50_A8GX52 Conjugal transfer protein TraA n=53 Tax=cellular... 237 3e-60 UniRef50_A1SH09 DNA primase catalytic core, N-terminal domain n=... 236 6e-60 UniRef50_B9QRK8 Ti-type conjugative transfer relaxase TraA, puta... 236 7e-60 UniRef50_B1M9U8 Conjugative relaxase domain protein n=5 Tax=Alph... 234 2e-59 UniRef50_D2S894 TrwC relaxase n=1 Tax=Geodermatophilus obscurus ... 233 4e-59 UniRef50_C3JH47 DNA primase catalytic core domain protein n=1 Ta... 233 5e-59 UniRef50_C6AF24 Conjugal transfer protein TraA n=2 Tax=Bartonell... 232 1e-58 UniRef50_B8KYV8 Putative trwC protein n=1 Tax=Stenotrophomonas s... 230 4e-58 UniRef50_Q21BL3 Putative ATP-dependent exoDNAse (Exonuclease V) ... 228 2e-57 UniRef50_Q8RMJ7 TraA n=3 Tax=Corynebacterium RepID=Q8RMJ7_CORDI 227 2e-57 UniRef50_A5CLM4 Putative conjugal transfer protein, Dtr system n... 227 3e-57 UniRef50_B9JRK7 Ti-type conjugative transfer relaxase TraA n=9 T... 227 5e-57 UniRef50_UPI00005104AE conjugative relaxase domain protein, TrwC... 225 1e-56 UniRef50_B3GW66 TraA Protein n=3 Tax=Corynebacterium RepID=B3GW6... 223 4e-56 UniRef50_C4WLD2 Ti-type conjugative transfer relaxase TraA n=1 T... 223 5e-56 UniRef50_C7JJ99 Conjugal transfer protein TraA n=10 Tax=Acetobac... 220 3e-55 UniRef50_A1SIX0 DNA primase catalytic core, N-terminal domain n=... 220 4e-55 UniRef50_Q11MR5 MobA/MobL protein n=32 Tax=Rhizobiales RepID=Q11... 219 1e-54 UniRef50_Q0ZKG3 Putative uncharacterized protein n=1 Tax=Coryneb... 217 5e-54 UniRef50_C8NSP3 Putative uncharacterized protein n=3 Tax=Coryneb... 215 1e-53 UniRef50_C4DRT0 TrwC relaxase n=1 Tax=Stackebrandtia nassauensis... 213 4e-53 UniRef50_Q1HG56 TraA n=1 Tax=Rhodococcus erythropolis RepID=Q1HG... 212 2e-52 UniRef50_Q6SK28 TraA-like protein n=2 Tax=Arthrobacter aurescens... 210 4e-52 UniRef50_Q9ETQ3 Conjugal transfer protein n=5 Tax=cellular organ... 208 1e-51 UniRef50_A3TJZ6 Transfer protein Tra-like n=1 Tax=Janibacter sp.... 208 2e-51 UniRef50_C7NLP0 TrwC relaxase n=9 Tax=Actinomycetales RepID=C7NL... 207 3e-51 UniRef50_B7L3A3 Ti-type conjugative transfer relaxase TraA n=2 T... 207 5e-51 UniRef50_D1N4L7 Conjugative relaxase domain protein n=2 Tax=Vict... 205 1e-50 UniRef50_B2I3X4 TrwC protein n=1 Tax=Acinetobacter baumannii ACI... 205 1e-50 UniRef50_UPI0001AF46AC exonuclease V subunit alpha n=1 Tax=Mycob... 202 1e-49 UniRef50_Q0RC71 Putative uncharacterized protein n=2 Tax=Frankia... 200 3e-49 UniRef50_Q70K35 Putative TraA protein n=1 Tax=Gordonia westfalic... 200 6e-49 UniRef50_C8XHE2 TrwC relaxase n=1 Tax=Nakamurella multipartita D... 199 7e-49 UniRef50_C2AI56 TrwC relaxase n=1 Tax=Tsukamurella paurometabola... 196 9e-48 UniRef50_A8QYS1 TraA protein n=1 Tax=Fluoribacter dumoffii RepID... 195 2e-47 UniRef50_C7RK95 Helicase, RecD/TraA family n=1 Tax=Candidatus Ac... 195 2e-47 UniRef50_Q6X3G0 TraA n=4 Tax=Gammaproteobacteria RepID=Q6X3G0_PSEAE 195 2e-47 UniRef50_C4XNH4 Conjugal transfer protein TraA n=1 Tax=Desulfovi... 193 6e-47 UniRef50_B7KWK3 Helicase, RecD/TraA family n=16 Tax=Bacteria Rep... 191 2e-46 UniRef50_Q6LR56 Putative ATP-dependent exoDNAse (Exonuclease V),... 190 3e-46 UniRef50_B9K371 Ti-type conjugative transfer relaxase TraA n=2 T... 188 1e-45 UniRef50_Q58IS3 Putative uncharacterized protein n=2 Tax=Strepto... 188 2e-45 UniRef50_C7Q5H7 TrwC relaxase n=1 Tax=Catenulispora acidiphila D... 188 3e-45 UniRef50_C6RJX0 Putative MobA/MobL protein n=1 Tax=Acinetobacter... 186 7e-45 UniRef50_Q131S0 MobA/MobL protein n=37 Tax=cellular organisms Re... 186 8e-45 UniRef50_B4V4K9 Putative uncharacterized protein n=1 Tax=Strepto... 185 1e-44 UniRef50_D0LFJ6 TrwC relaxase n=1 Tax=Gordonia bronchialis DSM 4... 185 2e-44 UniRef50_B3CU55 Putative conjugative transfer protein TraA n=26 ... 184 3e-44 UniRef50_UPI0001AEF487 conjugal transfer relaxase TraA n=1 Tax=A... 183 5e-44 UniRef50_Q0QW05 Putative uncharacterized protein n=1 Tax=Neisser... 182 9e-44 UniRef50_C5SL18 Ti-type conjugative transfer relaxase TraA n=2 T... 182 1e-43 UniRef50_Q310C7 ATP-dependent DNA helicase, RecD/TraA family n=4... 180 3e-43 UniRef50_B3E889 Exodeoxyribonuclease V n=2 Tax=Bacteria RepID=B3... 178 2e-42 UniRef50_D2Q9V3 TrwC relaxase n=2 Tax=Bifidobacterium dentium Re... 178 2e-42 UniRef50_A4JHA8 Putative uncharacterized protein n=1 Tax=Burkhol... 177 3e-42 UniRef50_B0P898 Putative uncharacterized protein n=3 Tax=Bacteri... 177 4e-42 UniRef50_C5EA62 ATP-dependent exoDNAse n=2 Tax=Bifidobacterium l... 177 4e-42 UniRef50_B9BFK7 MobA/MobL protein n=1 Tax=Burkholderia multivora... 176 6e-42 UniRef50_Q6MDD6 Putative exodeoxyribonuclease V n=1 Tax=Candidat... 176 7e-42 UniRef50_A3FG49 ORF16 n=1 Tax=Amycolatopsis benzoatilytica RepID... 176 8e-42 UniRef50_A8ZLV4 Helicase, RecD/TraA family n=18 Tax=Cyanobacteri... 173 5e-41 UniRef50_D2L9I1 MobA/MobL protein n=1 Tax=Desulfovibrio sp. FW10... 172 1e-40 UniRef50_A5IZI9 Exodeoxyribonuclease V alpha chain n=1 Tax=Mycop... 169 8e-40 UniRef50_C7IFQ7 AAA ATPase n=1 Tax=Clostridium papyrosolvens DSM... 168 2e-39 UniRef50_Q93UY8 TraA-related protein n=3 Tax=Agrobacterium RepID... 168 2e-39 UniRef50_B3EIT2 Helicase, RecD/TraA family n=13 Tax=Bacteria Rep... 166 5e-39 UniRef50_C5B6U1 Conjugal transfer protein TraA n=1 Tax=Methyloba... 163 7e-38 UniRef50_A5CCM9 Helicase RecD/TraA, ATP-dependent exoDNAse (Exon... 161 2e-37 UniRef50_Q3B2W0 Helicase RecD/TraA n=19 Tax=Bacteria RepID=Q3B2W... 161 2e-37 UniRef50_C2AVA8 TrwC relaxase n=1 Tax=Tsukamurella paurometabola... 161 2e-37 UniRef50_B5GIK2 Putative uncharacterized protein n=1 Tax=Strepto... 161 3e-37 UniRef50_B5ZL31 TrwC relaxase n=2 Tax=Gluconacetobacter diazotro... 153 8e-35 UniRef50_Q58IP1 Putative uncharacterized protein n=1 Tax=Strepto... 150 4e-34 UniRef50_C6XTP7 Exonuclease V subunit alpha n=1 Tax=Pedobacter h... 146 6e-33 UniRef50_A4AC13 Exodeoxyribonuclease V, alpha subunit n=1 Tax=Co... 144 3e-32 UniRef50_D1ZVM1 N-terminus not complete (Fragment) n=1 Tax=Sorda... 143 8e-32 UniRef50_B9Z717 Putative uncharacterized protein n=1 Tax=Lutiell... 141 2e-31 UniRef50_D2U0N4 Conjugal transfer nickase/helicase TraI (Fragmen... 141 2e-31 UniRef50_C3QZL9 ATP-dependent exoDNAse n=20 Tax=Bacteroidales Re... 141 3e-31 UniRef50_C7D7J8 Exodeoxyribonuclease V n=1 Tax=Thalassiobium sp.... 138 2e-30 Sequences not found previously or not previously below threshold: UniRef50_C0QEU8 RecD1 n=2 Tax=Desulfobacterales RepID=C0QEU8_DESAH 210 3e-52 UniRef50_A1RCJ6 Toprim domain n=5 Tax=Actinomycetales RepID=A1RC... 202 9e-50 UniRef50_A4T240 ATP-dependent exoDNAse (Exonuclease V) alpha sub... 196 6e-48 UniRef50_C4DCY8 TrwC relaxase n=1 Tax=Stackebrandtia nassauensis... 185 2e-44 UniRef50_Q5ZW46 Conjugal transfer protein TraA n=6 Tax=Legionell... 179 8e-43 UniRef50_B8I4C3 Exonuclease V subunit alpha n=1 Tax=Clostridium ... 170 6e-40 UniRef50_B4VXL3 Putative uncharacterized protein n=1 Tax=Microco... 169 1e-39 UniRef50_D1R7Z3 Putative uncharacterized protein n=1 Tax=Parachl... 167 4e-39 UniRef50_A8L8Y0 TrwC relaxase n=1 Tax=Frankia sp. EAN1pec RepID=... 165 1e-38 UniRef50_A6WWM4 Ti-type conjugative transfer relaxase TraA n=2 T... 163 8e-38 UniRef50_A5FUA1 ATP-dependent exoDNAse (Exonuclease V) alpha sub... 161 2e-37 UniRef50_B9NXA5 Putative MobA/MobL protein n=1 Tax=Rhodobacterac... 161 2e-37 UniRef50_D1GQF3 Phage protein n=2 Tax=Staphylococcus RepID=D1GQF... 161 3e-37 UniRef50_A6DHN1 ATP-dependent exoDNAse (Exonuclease V), alpha su... 160 4e-37 UniRef50_UPI00016C0EC6 helicase, RecD/TraA family protein n=1 Ta... 160 4e-37 UniRef50_A8EUL3 Exodeoxyribonuclease V, alpha subunit n=1 Tax=Ar... 160 4e-37 UniRef50_Q314D9 ATP-dependent DNA helicase, RecD/TraA family n=1... 160 6e-37 UniRef50_Q036N8 ATP-dependent DNA helicase, RecD/TraA family n=9... 159 9e-37 UniRef50_UPI0000E0F58B exodeoxyribonuclease V, alpha subunit n=1... 158 1e-36 UniRef50_D2SC15 TrwC relaxase n=4 Tax=Geodermatophilus obscurus ... 158 2e-36 UniRef50_Q11MY8 MobA/MobL protein n=1 Tax=Chelativorans sp. BNC1... 158 2e-36 UniRef50_B0B9E0 Exodeoxyribonuclease V alpha chain n=15 Tax=Chla... 157 3e-36 UniRef50_A0R7T4 ATPase n=1 Tax=Pelobacter propionicus DSM 2379 R... 157 4e-36 UniRef50_A0LD23 Helicase, RecD/TraA family n=1 Tax=Magnetococcus... 153 8e-35 UniRef50_D1VA45 TrwC relaxase n=1 Tax=Frankia sp. EuI1c RepID=D1... 152 1e-34 UniRef50_Q6N7J7 Possible Viral (Superfamily 1) RNA helicase n=1 ... 151 2e-34 UniRef50_A1SFN3 ATP-dependent exoDNAse (Exonuclease V) alpha sub... 151 2e-34 UniRef50_A3ZSA6 Possible Viral (Superfamily 1) RNA helicase n=1 ... 151 2e-34 UniRef50_Q83YK2 Putative uncharacterized protein n=1 Tax=Bifidob... 151 2e-34 UniRef50_UPI0000510573 TrwC relaxase n=1 Tax=Brevibacterium line... 150 4e-34 UniRef50_Q2J7P7 Putative uncharacterized protein n=1 Tax=Frankia... 150 4e-34 UniRef50_C5SD04 Helicase, RecD/TraA family n=1 Tax=Allochromatiu... 150 4e-34 UniRef50_A9KS02 Helicase, RecD/TraA family n=32 Tax=Bacteria Rep... 150 6e-34 UniRef50_B1I2W6 Helicase, RecD/TraA family n=1 Tax=Candidatus De... 150 6e-34 UniRef50_A7ABF9 Putative uncharacterized protein n=2 Tax=Bactero... 150 6e-34 UniRef50_D0LWH5 Exodeoxyribonuclease V n=1 Tax=Haliangium ochrac... 148 1e-33 UniRef50_B2IL44 TrwC relaxase n=9 Tax=Alphaproteobacteria RepID=... 148 1e-33 UniRef50_C3CUT3 Helicase, RecD/TraA n=1 Tax=Bacillus thuringiens... 148 2e-33 UniRef50_C8NA26 Probable exonuclease V, alpha subunit n=1 Tax=Ca... 148 2e-33 UniRef50_C1MI09 Predicted protein n=1 Tax=Micromonas pusilla CCM... 148 2e-33 UniRef50_A4AB31 Putative uncharacterized protein n=1 Tax=Congreg... 147 4e-33 UniRef50_D1A5Y8 Helicase, RecD/TraA family n=15 Tax=Bacteria Rep... 147 4e-33 UniRef50_C3CTA5 Helicase RecD/TraA n=1 Tax=Bacillus thuringiensi... 146 6e-33 UniRef50_D1U587 Helicase, RecD/TraA family n=2 Tax=Desulfovibrio... 146 8e-33 UniRef50_C7IID4 Exonuclease V subunit alpha n=1 Tax=Clostridium ... 146 9e-33 UniRef50_A4JFN0 AAA ATPase n=1 Tax=Burkholderia vietnamiensis G4... 146 1e-32 UniRef50_Q14LX3 Putative exodeoxyribonuclease v alpha subunit pr... 145 1e-32 UniRef50_A6P2F0 Putative uncharacterized protein n=1 Tax=Bactero... 144 3e-32 UniRef50_A6TL79 Helicase, RecD/TraA family n=35 Tax=Bacteria Rep... 143 5e-32 UniRef50_UPI000050FF73 TrwC relaxase n=1 Tax=Brevibacterium line... 143 5e-32 UniRef50_C0AD34 Exodeoxyribonuclease V n=2 Tax=Verrucomicrobia R... 143 6e-32 UniRef50_Q30PF5 ATPase n=2 Tax=Campylobacterales RepID=Q30PF5_SULDN 143 6e-32 UniRef50_A4XG10 ATP-dependent DNA helicase, RecD/TraA family n=2... 142 1e-31 UniRef50_C3RPY6 Exonuclease V subunit alpha n=1 Tax=Mollicutes b... 141 2e-31 UniRef50_D2S7J1 Helicase, RecD/TraA family n=15 Tax=Actinomyceta... 141 2e-31 UniRef50_Q1WTZ7 Exodeoxyribonuclease V alpha chain n=2 Tax=Lacto... 141 3e-31 UniRef50_B1VNB9 Putative exodeoxyribonuclease-like protein n=1 T... 141 3e-31 UniRef50_Q5HXP7 Conjugal transfer protein TraA n=1 Tax=Gluconoba... 140 4e-31 UniRef50_C6X7W3 ATP-dependent exoDNAse (Exonuclease V) alpha sub... 140 4e-31 UniRef50_C5V224 AAA ATPase n=1 Tax=Gallionella ferruginea ES-2 R... 140 4e-31 UniRef50_B0MXQ8 Putative uncharacterized protein n=1 Tax=Alistip... 140 5e-31 UniRef50_B7J7Z5 Helicase, RecD/TraA family n=1 Tax=Acidithiobaci... 140 5e-31 UniRef50_Q2LTP5 Exodeoxyribonuclease V alpha chain n=22 Tax=Bact... 140 5e-31 UniRef50_UPI0001AEC2FF exodeoxyribonuclease V, alpha subunit n=1... 139 8e-31 UniRef50_B1KNB0 AAA ATPase n=1 Tax=Shewanella woodyi ATCC 51908 ... 139 9e-31 UniRef50_Q58914 Uncharacterized protein MJ1519 n=1 Tax=Methanoca... 139 1e-30 UniRef50_B2A8J3 Helicase, RecD/TraA family n=2 Tax=Clostridia Re... 139 1e-30 UniRef50_B8J4Q4 Helicase, RecD/TraA family n=9 Tax=Bacteria RepI... 139 1e-30 UniRef50_Q98PE1 EXODEOXYRIBONUCLEASE V ALPHA CHAIN n=1 Tax=Mycop... 139 1e-30 UniRef50_A6LEW0 ATP-dependent exonuclease V, alpha subunit-helic... 138 2e-30 UniRef50_C7NFC4 TrwC relaxase n=1 Tax=Kytococcus sedentarius DSM... 138 2e-30 UniRef50_Q5QUQ9 ATP-dependent exoDNAse (Exonuclease V), alpha su... 138 2e-30 UniRef50_UPI0001BCE40A exonuclease V subunit alpha n=1 Tax=Aerom... 138 3e-30 UniRef50_B2JBK4 Exodeoxyribonuclease V, alpha chain n=2 Tax=Nost... 138 3e-30 UniRef50_D2PTF6 TrwC relaxase n=1 Tax=Kribbella flavida DSM 1783... 137 3e-30 UniRef50_B0MLK7 Putative uncharacterized protein n=1 Tax=Eubacte... 137 3e-30 UniRef50_Q04B55 ATP-dependent DNA helicase, RecD/TraA family n=2... 137 3e-30 UniRef50_A6YFT0 Putative TraA n=1 Tax=Arthrobacter sp. Chr15 Rep... 137 4e-30 >UniRef50_P22706 Protein traI n=96 Tax=root RepID=TRAI2_ECOLX Length = 1756 Score = 2077 bits (5382), Expect = 0.0, Method: Composition-based stats. Identities = 1686/1756 (96%), Positives = 1718/1756 (97%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRL 60 M+S + V+SAGSAGNYYTDKDNYYVLGSMGERWAG+GAEQLGLQGSVDKDVFTRLLEGRL Sbjct: 1 MLSFSVVKSAGSAGNYYTDKDNYYVLGSMGERWAGQGAEQLGLQGSVDKDVFTRLLEGRL 60 Query: 61 PDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEAL 120 PDGADLSRMQDGSN+HRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEAL Sbjct: 61 PDGADLSRMQDGSNKHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEAL 120 Query: 121 ASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDKV 180 ASTRVMTDGQSETVLTGNLVMALFNHDTSRDQ+PQLHTH VVANVTQHNGEWKTLSSDKV Sbjct: 121 ASTRVMTDGQSETVLTGNLVMALFNHDTSRDQDPQLHTHVVVANVTQHNGEWKTLSSDKV 180 Query: 181 GKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVEAFSGRSQT 240 GKTGF ENV AN+IAFG++Y+ +L+++VEALGYETEVVGKHGMWEMPGVPVEAFS RSQ Sbjct: 181 GKTGFSENVLANRIAFGKIYQSELRQRVEALGYETEVVGKHGMWEMPGVPVEAFSSRSQA 240 Query: 241 IREAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRAD 300 IREAVGEDASLKSRDVAALDTRKSK HVDPE++MAEWMQTLKETGFDIRAYRDAADQRA+ Sbjct: 241 IREAVGEDASLKSRDVAALDTRKSKHHVDPEVRMAEWMQTLKETGFDIRAYRDAADQRAE 300 Query: 301 LRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAG 360 +RT PGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAG Sbjct: 301 IRTQAPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAG 360 Query: 361 IDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYS 420 IDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYS Sbjct: 361 IDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYS 420 Query: 421 DAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDE 480 DAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQ+N+KQDE Sbjct: 421 DAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQLNLKQDE 480 Query: 481 RLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR 540 RLSGELITGRRQL EGM FT GST IVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR Sbjct: 481 RLSGELITGRRQLQEGMVFTSGSTFIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR 540 Query: 541 TGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQ 600 TGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRY RLAGDFAASVKAGEESVAQ Sbjct: 541 TGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYDRLAGDFAASVKAGEESVAQ 600 Query: 601 VSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWN 660 VSGVREQAILTQAIRSELKTQGVLG PEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWN Sbjct: 601 VSGVREQAILTQAIRSELKTQGVLGHPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWN 660 Query: 661 PETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRV 720 PETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRV Sbjct: 661 PETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRV 720 Query: 721 TGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGH 780 TGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPV+DSPFTALKLENGWVETPGH Sbjct: 721 TGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVADSPFTALKLENGWVETPGH 780 Query: 781 SVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQI 840 SVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQI Sbjct: 781 SVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQI 840 Query: 841 KTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTG 900 K RAGETSLETAIS QK+ LHTPAQQAIHLALPV+ESK LAFSMVDLLTEAKSFAAEGTG Sbjct: 841 KARAGETSLETAISLQKTGLHTPAQQAIHLALPVLESKNLAFSMVDLLTEAKSFAAEGTG 900 Query: 901 FTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMER 960 FTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAV PLMER Sbjct: 901 FTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVTPLMER 960 Query: 961 VPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRV 1020 VPGELME LTSG RAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLP SERPRV Sbjct: 961 VPGELMETLTSGPRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPASERPRV 1020 Query: 1021 VGLGPTHRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDM 1080 VGLGPTHRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDM Sbjct: 1021 VGLGPTHRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDM 1080 Query: 1081 ARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAV 1140 ARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADV IMKEIVRQTPELREAV Sbjct: 1081 ARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVVIMKEIVRQTPELREAV 1140 Query: 1141 YSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEA 1200 YSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGE Sbjct: 1141 YSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGET 1200 Query: 1201 FPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVM 1260 FPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHD REKAGELGKEQVM Sbjct: 1201 FPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDAREKAGELGKEQVM 1260 Query: 1261 VPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLIS 1320 VPVLNTANIRDGELRRLSTWE + DAL LVD+VYHRIAGISKDDGLITL+DAEGNTRLIS Sbjct: 1261 VPVLNTANIRDGELRRLSTWENNPDALALVDSVYHRIAGISKDDGLITLEDAEGNTRLIS 1320 Query: 1321 PREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQT 1380 PREAVAEGVTLYTPD IRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQT Sbjct: 1321 PREAVAEGVTLYTPDKIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQT 1380 Query: 1381 REIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMK 1440 R IRPGQE+AEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMK Sbjct: 1381 RVIRPGQERAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMK 1440 Query: 1441 QHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAV 1500 QHVQVYTDNRQGWTDAINNAVQKGTAHDV EPKPDREVMNA+RLFSTARELRDVAAGRAV Sbjct: 1441 QHVQVYTDNRQGWTDAINNAVQKGTAHDVLEPKPDREVMNAQRLFSTARELRDVAAGRAV 1500 Query: 1501 LRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGE 1560 LRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGE Sbjct: 1501 LRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGE 1560 Query: 1561 GRVKGSGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPGAIT 1620 GRVKGSGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPGAIT Sbjct: 1561 GRVKGSGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPGAIT 1620 Query: 1621 GGRVWGDIPDNSVQPGAGNGEPVTAEVLAQRQAEEAIRRETERRADEIVRKMAENKPDLP 1680 GGRVWGDIPD+SVQPGAGNGEPVTAEVLAQRQAEEAIRRETERRADEIVRKMAENKPDLP Sbjct: 1621 GGRVWGDIPDSSVQPGAGNGEPVTAEVLAQRQAEEAIRRETERRADEIVRKMAENKPDLP 1680 Query: 1681 DGKTEQAVREIAGQERDRAAITEREAALPEGVLREPQRVREAVREIARENLLQERLQQME 1740 DGKTEQAVREIAGQERDRA ITEREAALPE VLRE QR +EAVRE+ARENLLQERLQQ+E Sbjct: 1681 DGKTEQAVREIAGQERDRADITEREAALPESVLRESQREQEAVREVARENLLQERLQQIE 1740 Query: 1741 RDMVRDLQKEKTLGGD 1756 RDMVRDLQKEKTLGGD Sbjct: 1741 RDMVRDLQKEKTLGGD 1756 >UniRef50_D2U4N9 Conjugal transfer nickase/helicase (Fragment) n=1 Tax=Arsenophonus nasoniae RepID=D2U4N9_9ENTR Length = 1601 Score = 1519 bits (3932), Expect = 0.0, Method: Composition-based stats. Identities = 775/1629 (47%), Positives = 1090/1629 (66%), Gaps = 28/1629 (1%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRL 60 MMS +++SA AG+YYT KDNYYVL SM ER+ G+GAE LGL G DK+ F LLEG+L Sbjct: 1 MMSFNRIKSAQGAGDYYTQKDNYYVLESMEERYFGKGAEILGLTGEFDKNTFRELLEGKL 60 Query: 61 PDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEAL 120 PDG +L +DG N+HRPGYDLTFSAPKS+S+MA++ GDKRL++AHN+AV+ A+ Q E Sbjct: 61 PDGTELIFHKDGKNQHRPGYDLTFSAPKSISIMALVAGDKRLLEAHNKAVEVALSQAEKF 120 Query: 121 ASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDKV 180 AS R M++GQ +TVLT NL+ LFNHDTSRD +PQLHTH+VV N TQHN +W+ L+SD V Sbjct: 121 ASARTMSEGQKQTVLTDNLIAVLFNHDTSRDVDPQLHTHSVVINATQHNEKWQALASDTV 180 Query: 181 GKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVEAFSGRSQT 240 GKTGF E + AN+IA G++YR L+EQ E+LGYETE+VGKHG+WE+ VP E FS R+ Sbjct: 181 GKTGFSEMILANKIALGQIYRHALREQTESLGYETEIVGKHGLWELKNVPTEVFSKRTLA 240 Query: 241 IREAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRAD 300 I AVG+DAS K+RD+A LDTR+ K DP+ +W L TGFD Y+ A+ Sbjct: 241 IDNAVGKDASPKARDIATLDTRQKKTQQDPQQLRQQWQAELHSTGFDAEKYQAQAEINRL 300 Query: 301 LRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAG 360 + + ++ A++QAI+ LS+R+ QFTY+ +LA+ + LP + GVIE+ARAG Sbjct: 301 QAQNPTTSSIIEPEQIETAISQAISQLSDRQTQFTYSQLLAKAINQLPAQPGVIEQARAG 360 Query: 361 IDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYS 420 ID+AI +EQLIPLD+EKGLFTS I +LDELS++ + K V P+ + P S Sbjct: 361 IDQAIEKEQLIPLDKEKGLFTSDIQLLDELSLKQRIKQHQKIT-HGVSPQVT-PINQNTS 418 Query: 421 DAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDE 480 A P++A++SG GGA+ +R+RVAELV + + GR+ ++A D++S+ + E Sbjct: 419 PAARQWLFANPNIAVMSGIGGASIRRDRVAELVTLTNQTGRQAVVLAPDQKSRQYL--ME 476 Query: 481 RLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR 540 L + R+ + + AF+P ST+IV EKL+LKE ++L D A R N+Q+++ D+ QR Sbjct: 477 TLPESQVVNRQAINQETAFSPNSTLIVQDAEKLTLKEMVSLTDKAIRENLQLVLMDNQQR 536 Query: 541 TGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQ 600 GTG+AL ++ +R+ G + I+SEPD+ R +LA D+ ++ G +SVAQ Sbjct: 537 KGTGNALSILRQETA-VFRYSGIKPVQTAIVSEPDKTARLKKLAKDYTRTLAQGIDSVAQ 595 Query: 601 VSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWN 660 ++G REQ LT IR LKTQG+LG E+++T L P WL ++SR RD YR G VME W+ Sbjct: 596 ITGNREQKNLTGYIREALKTQGLLGKNEMSITTLKPQWLTAKSRISRDSYREGWVMEYWD 655 Query: 661 PETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRV 720 E +S +R++IDRVTA S++LTL + GE ++ +I+ L+S WSL++P K+ +++GERLR+ Sbjct: 656 SEKKSKERFIIDRVTAVSNTLTLINQHGEQRLEKITQLNSHWSLYQPAKIAISEGERLRL 715 Query: 721 TGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGH 780 + ++ GDRLQ E MT+ + T+ ++ F+ALK+E +V+ G Sbjct: 716 LAREGKGKLKTGDRLQATRHKEGEMTLTHDNTQKTLTVKANNDVFSALKIEQDYVQPLGG 775 Query: 781 SVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQI 840 S+SD A VFA+VTQ ++ TLN LARSG + LYS+LD +TA+KLA++P + EQ+ Sbjct: 776 SISDKARVFAAVTQRDLNQETLNQLARSGEKLVLYSALDVQKTAQKLAKNPHYQTTIEQV 835 Query: 841 KTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTG 900 +GE +L+ AI QKS L TPAQQAI LA+P +E K + F+ LL A + + Sbjct: 836 NALSGEQNLDKAIEKQKSRLFTPAQQAISLAMPQLEQKNITFTQAQLLATAMNAGEKPLS 895 Query: 901 FTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMER 960 + EI+AQIK L+ + V +G+GT LL+++AS+E EK I++HI EGK A+ PLM Sbjct: 896 QQTIEQEIDAQIKNNRLIEMPVVEGFGTNLLINQASFETEKQIIQHIAEGKSALSPLMSA 955 Query: 961 VPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRV 1020 VP ++ LT GQ+ AT++ILET DRF +QGYAGVGKTTQF+AV+SA++ LP+ ++P++ Sbjct: 956 VPDSVLNGLTPGQKEATKLILETPDRFIAIQGYAGVGKTTQFKAVLSAIDTLPKDKQPQI 1015 Query: 1021 VGLGPTHRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDM 1080 +GL PTHRAV EM++AGVDA+TLA+FL++ + GE PD+ NTLF++DE++M+GNTDM Sbjct: 1016 IGLAPTHRAVSEMQTAGVDAKTLAAFLYEESQKITQGEKPDYQNTLFVIDEAAMIGNTDM 1075 Query: 1081 ARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAV 1140 A+AY LIAAG GRAV SGD+ QLQ I+PGQPFRLQQ RSA D +MKEIVRQTP+L+ A+ Sbjct: 1076 AKAYHLIAAGNGRAVMSGDSAQLQPISPGQPFRLQQQRSAIDNVVMKEIVRQTPQLKPAI 1135 Query: 1141 YSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEA 1200 +I +++ A+ + + P VPR+E AW P+ S+ E Sbjct: 1136 VQMIAGNIKEAIHTVNQLSPDIVPRKENAWIPDKSIVEMK-------------------- 1175 Query: 1201 FPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVM 1260 D P L++AIV D+ GRT EA+E+TLI+T LN DRR +N++IH ++K GEL +V Sbjct: 1176 --DNPDNLHQAIVADFIGRTKEAQEKTLIITPLNADRRAINALIHQEKQKGGELQGNEVT 1233 Query: 1261 VPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLIS 1320 +P+L NI DG+LR ++TW TH+ AL L +N Y +I I + +TL++ +G L+S Sbjct: 1234 LPILVNTNIPDGQLRNINTWATHQQALALKNNQYWQITEIDIKNDTVTLRNEQGQESLLS 1293 Query: 1321 PREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQT 1380 PR+AV EG+TLY +T+ V GD++RFTKSD E+G++ANSVW + A ++TL++G++T Sbjct: 1294 PRQAVKEGITLYQAETLTVSQGDKIRFTKSDNEQGFLANSVWQIQAADEKTITLTNGKKT 1353 Query: 1381 REIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMK 1440 R + P ++ HIDLAYAIT H +QGASE FAI L T+G K +AYVALSR K Sbjct: 1354 RTLTPTTDKQHAHIDLAYAITTHASQGASEQFAITLAKTQGKNKAATHPAAAYVALSRAK 1413 Query: 1441 QHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAV 1500 HVQVYTDN WT + QK TAHDV E K NA+ LF + L A GRA Sbjct: 1414 AHVQVYTDNIDDWTALLEKPSQKATAHDVVEQKDITARENAKALFKQGQPLETTAQGRAA 1473 Query: 1501 LRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGE 1560 LR + L+ G+S +++ G+KYPQ Y+ P FD+NGK AG+W+ L ++ G Sbjct: 1474 LRASHLS-GESMGKWLRMGKKYPQNYLGFPIFDQNGKQAGVWMTRLNNNNPQKPIGNHTI 1532 Query: 1561 GRVKGSGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPGAIT 1620 G+ GS +A+F+A Q S+NG++ LA+ + + V IA ++P G++VR+ G P NP AIT Sbjct: 1533 GKRIGSQEARFLAFQRSQNGKTALANTLTEAVEIANNHPQHGIIVRLEGNDMPHNPKAIT 1592 Query: 1621 GGRVWGDIP 1629 GG+ W + P Sbjct: 1593 GGQQWVNQP 1601 >UniRef50_D1S139 Protein TraI n=1 Tax=Serratia odorifera 4Rx13 RepID=D1S139_SEROD Length = 1761 Score = 1475 bits (3819), Expect = 0.0, Method: Composition-based stats. Identities = 666/1795 (37%), Positives = 1005/1795 (55%), Gaps = 76/1795 (4%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRL 60 MMS+A V SA +A NYY+++DNYY LGS+ +W G GA++LGL GSV++ FT +L G+L Sbjct: 1 MMSVAPVASAANAANYYSNQDNYYFLGSLQSQWLGEGAKELGLTGSVEQQAFTDVLFGKL 60 Query: 61 PDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEAL 120 P+G L + + + HRPG+DLTFSAPKSVS+M ++GGDK L+ AHN+AV A Q++ L Sbjct: 61 PNGVQLGKEVNNQHVHRPGHDLTFSAPKSVSLMILIGGDKELLQAHNEAVKVAAEQIQNL 120 Query: 121 ASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDKV 180 S R DG + V TG LV A + HDTSR+ +PQ+HTH +VANVT+ +G+WK L++D + Sbjct: 121 VSARDTKDGVTSIVPTGKLVAAAYTHDTSRNLDPQVHTHLIVANVTELDGKWKALATDYI 180 Query: 181 GKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPV---EAFSGR 237 K GFIE V A+Q+ G+LYR LKE+VE LG+ETE+VGKHG+WE+ GVP + FS R Sbjct: 181 HKAGFIETVMAHQVTLGKLYRNALKEKVEKLGHETEIVGKHGLWEIKGVPEPVRDEFSSR 240 Query: 238 SQTIREAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQ 297 + I AVG DA+L+SRDVAA DTR +K + W +K+ GFDI+ Y+ + Sbjct: 241 GKEIETAVGVDATLRSRDVAAKDTRAAKVDPSKMRLLERWQNQMKDMGFDIQDYKKSLKP 300 Query: 298 RADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERA 357 + P D QQAV A++ LS+ K +FTY+DVL +G + + Sbjct: 301 VDTPDRSSVEPD----IDAQQAVRDAVSLLSDNKTRFTYSDVLLTALGSSENQIKTAD-I 355 Query: 358 RAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTA 417 RA ID A+ +IPLD+EKG+F S +H+LDELS++ L++D++K ++V ++ P A Sbjct: 356 RAAIDGAMQDNLIIPLDKEKGVFASRLHLLDELSIQGLAQDMVKNSQVVAFKDRQTPLPA 415 Query: 418 GYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMK 477 + + LA++S GGAA RE +A L +++ GR V ++A+ ++K Sbjct: 416 ELAPIAT------EQLALLSSIGGAAQHRELIAGLATASKDAGRSVMVLASSAEKSASLK 469 Query: 478 QDERLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDS 537 + E L G + L + TVIV+ E+LSLKETL L+ A + QV+ D Sbjct: 470 KSEDLQGIVQNKFSILQPDFSMKAHGTVIVESAEQLSLKETLVLIGHAREKDAQVIFVDG 529 Query: 538 GQRTGTGSALMAMKDAGVNTYRWQG-GEQRPATIISEPDRNVRYARLAGDFAASVKAGEE 596 R +A+ ++ AGV + A +IS D+ RY LA +A E Sbjct: 530 AGRKHISNAMAVLESAGVTRHALNTPSPGLQAEVISISDKQERYRALADRYAELSGGTEP 589 Query: 597 SVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVM 656 A V G+REQ L AIR L+ G L V + A SPV+LD++SR + YR G V+ Sbjct: 590 VTAAVVGMREQRNLNAAIREALQDAGKLDRGGVVIEARSPVFLDTKSRKQPENYRAGYVL 649 Query: 657 EQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGE 716 E + + D Y IDRV ++ L+L D+ G + V+I +DS W LF ++ VA+GE Sbjct: 650 E-HRKDAKHTDHYRIDRVHRETRMLSLIDSDGVLRNVKIRDMDSDWRLFESREIAVANGE 708 Query: 717 RLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVE 776 +L + + DRL V +SE +T + + LP+ L +++G+ Sbjct: 709 KLLAIAGDKEIGLKAKDRLTVTQISEKGITAQLGDGKKSVLLPLERP----LYIQHGYAG 764 Query: 777 TPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVV 836 PG SV+D+ V A++ + T+N LA+SG +++ + + +KLAR Sbjct: 765 APGASVNDNGHVLAALNSRELSGNTVNALAQSGTRAEIFTGEVQDKAEDKLARMSQVNTP 824 Query: 837 SEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAA 896 ++ AG++ L A+ + + Q+A+ + S +AF+ + LL A Sbjct: 825 LTHVQHMAGKSELPEALQKLNADVWGDVQKAVTYGIEQSMSHSIAFTPMTLLDNAM---G 881 Query: 897 EGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMP 956 + + EI+ + K G+L+ V V G V+R++YE EK+I+R + +GK P Sbjct: 882 QLNNHQAIAAEIDRREKSGELINVVV---QGKNQYVARSAYEMEKTIVRIVEQGKGTQEP 938 Query: 957 LMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESE 1016 L+E+V ++ LT GQ TRM+L T D+F +VQG AGVGKTTQ A A+ L Sbjct: 939 LLEQVDPTVLAGLTPGQNQTTRMLLGTKDQFILVQGSAGVGKTTQLTAFQGALQTLAPEN 998 Query: 1017 RPRVVGLGPTHRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVG 1076 RP++VGL PTH+AV EMR+ G++AQT SF+ + + +GET ++ N +F++DESSMVG Sbjct: 999 RPKIVGLAPTHQAVKEMRAVGIEAQTTKSFIVEHDKRVAAGETINYENVVFVIDESSMVG 1058 Query: 1077 NTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQ-TPE 1135 N D A AY IA G GR ++ GD +QL ++ G PF+L Q RS DVAIMK+IVRQ P Sbjct: 1059 NQDTAEAYQAIAQGSGRGISVGDREQLLSVDSGAPFQLLQERSPIDVAIMKDIVRQDAPA 1118 Query: 1136 LREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAM 1195 L+ AVY ++ V+ ++ +++V PS VPR A+ P S+ + +A L +K M Sbjct: 1119 LKAAVYDILENKVDASIEKIKTVSPSVVPRLPDAFVPAGSIEDLKAESDA-LKANIEKGM 1177 Query: 1196 LKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELG 1255 E P+ T I+ DYTGRT RE+TLI+TH N DRR +N IHD +K G LG Sbjct: 1178 KIDEDKPE--PTAVSRIIADYTGRTAATREKTLIITHTNSDRRSVNEGIHDTLKKKGVLG 1235 Query: 1256 KEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGN 1315 ++Q+ +PVL N L ++ ++ + ++L + Y + + K GL+ +D G Sbjct: 1236 EKQITIPVLTRVNDDRRALNQVDKFKAGQ--VILEGDRYLDVINVDKSSGLVWTRDENGR 1293 Query: 1316 TRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGD-SVTL 1374 L+SP E + + ++ ++I V GD++RF+KS++ G +AN +TV+ V D VTL Sbjct: 1294 QHLLSPFENSSRDIAIFNRESIAVAVGDKVRFSKSNKNDGQLANETYTVSGVKDDGQVTL 1353 Query: 1375 SDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYV 1434 S T+ I P ++H+D AYA+T +GAQG S + I LEG EG R ++A S Y+ Sbjct: 1354 SGNAGTKTIHPRDRNTDRHVDYAYAVTGYGAQGTSMPYVITLEGAEGARGMLATMRSFYI 1413 Query: 1435 ALSRMKQHVQVYTDNRQGWTDAINNAVQK-GTAHDVFEPKPDREVMNAERLFSTARELRD 1493 ++SR K HVQ+Y+DN W I V++ TAHDV +P+ R A ++S L Sbjct: 1414 SISRAKSHVQIYSDNLDKWIGKIKKPVEELLTAHDVLKPETQRH--QARTIWSMGVPLNK 1471 Query: 1494 VAAGRAVLRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNG 1553 A GRA +Q G AR I RKYP+P++A P FD NGK+AGI L PL Sbjct: 1472 TAIGRAWQKQDGQVNSGLAARVIPQTRKYPEPHLAFPVFDGNGKAAGISLTPLHVSQQGK 1531 Query: 1554 LRGFSGEGRVKGSGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRP 1613 + +G R+ + +AQ ++ SRNG++LLA + ++ IARD+ SG+V +I + Sbjct: 1532 IE--TGTPRLMATDNAQAALIRKSRNGQTLLATSFEEARAIARDDKQSGIVWQIGDKLPS 1589 Query: 1614 WNPGAITGGRVWGDIPD---------NSVQPGAGNGEPVTAEVL-------AQRQAEEAI 1657 N ++T G + +I + +QP + P+ A AQ+ A E Sbjct: 1590 ENMVSLTKGTLKQNIETLHHLAATIADQLQPNSPTTSPMPAPAATHDLDPRAQQLALEQA 1649 Query: 1658 RR--ETERRADEIVRKMAENKPDLPDGKTEQAVREIAGQ---ERDRAAITER-------E 1705 R+ + ++ +E+ +++ KP +P + E+ + ++A + E++ AA R + Sbjct: 1650 RQLADAHQKQEELAKQV---KPVIPQPRPEEKLPDLAHEKLMEQNAAASVSRKERSKGTD 1706 Query: 1706 AALPEGVLREPQRVR---EAVREIARENLLQERLQQMER---DMVRDLQKEKTLG 1754 ++ V R Q+ + E VREI + QER ++ R DM R Q+EKT G Sbjct: 1707 ISIDSAVTRVHQQEKDRSEQVREI-NVSRTQERDRERVRDEPDMQRQHQQEKTRG 1760 >UniRef50_B6ICH5 TraI protein n=1 Tax=Escherichia coli SE11 RepID=B6ICH5_ECOSE Length = 1738 Score = 1430 bits (3702), Expect = 0.0, Method: Composition-based stats. Identities = 768/1789 (42%), Positives = 1084/1789 (60%), Gaps = 87/1789 (4%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRL 60 M+SIA + AG YYT +DNYY LGSM RW G GA+ L L+G VD L+ GRL Sbjct: 1 MLSIAPI--AGGGAGYYTSQDNYYFLGSMQSRWLGEGAKSLQLEGPVDAFRLDELIAGRL 58 Query: 61 PDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEAL 120 P+G L RM+ G N HR GYDLTFSAPKSVS++ L G+ RL++A N+AV +++VE+L Sbjct: 59 PNGVSLERMEGGINVHRSGYDLTFSAPKSVSVLIALYGENRLLEAWNRAVSETLKEVESL 118 Query: 121 ASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDKV 180 S+RVM +G++ET LT V+A FNHDTSR+ +PQLHTHA+ N+T W+TL+S V Sbjct: 119 VSSRVMKEGETETQLTQKAVIATFNHDTSRNLDPQLHTHALFLNMTPTESGWRTLASGTV 178 Query: 181 GKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVEAFSGRSQT 240 K GFIE VYANQ+A G++ L+ QVEA+GYET GK+G+WE+ GVPV+ FS RSQ Sbjct: 179 RKDGFIEAVYANQLALGQIQLNLLRRQVEAMGYETVDTGKNGLWEIKGVPVDIFSTRSQQ 238 Query: 241 IREAVGEDASLKSRDVAALDTRKSKQ-HVDPEIKMAEWMQTLKETGFDIRAYRDAADQRA 299 IREAVG+DAS+KSR VAALDTR++KQ D E + EW + + TGF RA R+ A +R Sbjct: 239 IREAVGDDASVKSRSVAALDTRRAKQKEPDREELLTEWHERIDRTGFSYRALREKAAERE 298 Query: 300 DLRTLTPGPASQDGPDV------------------------------QQAVTQAIAGLSE 329 L+ T + + + + AV+QAI+ LS+ Sbjct: 299 ALQQSTRSVSEPEKAVLSGEAGGYSQREKSSSSTSGQREGVPVPSVMRDAVSQAISLLSD 358 Query: 330 RKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDE 389 R+ QFTY+DVL+RT+ ++ E G I ARAGI++AIS +L+PLD+EKGLFTS IH+LDE Sbjct: 359 RRAQFTYSDVLSRTLALVEAEPGSIALARAGIEQAISSGELVPLDKEKGLFTSSIHLLDE 418 Query: 390 LSVRALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERV 449 LSV+ L++ M++N+V V +P A +VLA P++AI+S G QRE++ Sbjct: 419 LSVQQLAQQAMRENQVMVTMRPEMPL----QGAAAVLADTLPAVAIISTGRGMTTQREQI 474 Query: 450 AELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGSTVIVDQ 509 +V MA QGR+VQ++A DR+ + + + LSG+ + LL G ST+++ Sbjct: 475 QAVVAMAEGQGRQVQVMAPDRKMTAFLAEQQGLSGK--VSGKNLLTGEGLKHDSTLVIAG 532 Query: 510 GEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMKDAGVNTYRWQGGEQRPAT 569 EKLS+KET+TLLD A R+NVQV++ D G R GTG+AL ++DAGV + + Sbjct: 533 AEKLSVKETVTLLDQALRNNVQVVLMDGGGRQGTGNALATLEDAGVVRLQGGTDRGVRVS 592 Query: 570 IISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEV 629 ++S DR RY +LA D+A GE VAQ G REQ LT+AIR LK G LG +V Sbjct: 593 VVSHGDRRQRYEQLALDYAVLHTQGESVVAQAPG-REQRALTEAIRKSLKATGELGDRDV 651 Query: 630 TMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGE 689 T++ L+PV+LDS++R L D YR G ++E+++ E R+ +RY IDRVTA+S +LTL D +G Sbjct: 652 TISTLTPVFLDSKNRRLTDSYREGQILERYDAERRTSERYTIDRVTARSRTLTLTDEKGR 711 Query: 690 TQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVV 749 +Q++++ +DSSW L++P +PVA+GE+L + G ++ GD + V +++ +TV Sbjct: 712 SQLIKVRDMDSSWRLYQPGMLPVAEGEKLMLLGSHG--KLRSGDSVTVEHITDRTLTVRQ 769 Query: 750 PGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSG 809 R LPV+D LK+ G+V TPG +VS+ V A+V+ TLN LA SG Sbjct: 770 GERR--HRLPVAD----GLKISQGYVTTPGKTVSEQGVVLAAVSARDTQAQTLNTLATSG 823 Query: 810 RDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIH 869 V++Y+SL E +LAR P + EQ+ L+TA+ + +L ++A+ Sbjct: 824 DRVQIYTSLSEEDAHARLARSPLYRQAREQVSPEG--KPLDTAMQQARDSLMPVTEKAVR 881 Query: 870 LALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTG 929 A+ + + + FS D++ EA T + + ++RG++L V Sbjct: 882 QAITLAQGSSVVFSRQDVVLEALKAHPSVTPYG-IHHTFAELVQRGEILSVP--GDGSAS 938 Query: 930 LLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTV 989 VS ++ EK+ILR + EGK PLME V L+ LTSGQ+ A+R+ILE++DRF Sbjct: 939 RYVSAETWLQEKAILRTMAEGKSTQRPLMETVDLSLLTGLTSGQQTASRLILESTDRFVA 998 Query: 990 VQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVDAQTLASFLHD 1049 +QGYAGVGKTTQFR+V++A+ LPE++RP VVGL PTHRAV EM+ GV AQT+ASFL D Sbjct: 999 IQGYAGVGKTTQFRSVLAALETLPEADRPVVVGLAPTHRAVSEMQGVGVKAQTIASFLMD 1058 Query: 1050 TQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPG 1109 T+ +Q+SGE +FS TLFL+DESSMVGN DMA A IAA GGRAV SGD+ QLQ +A G Sbjct: 1059 TERRQQSGEQLNFSKTLFLIDESSMVGNRDMADTLARIAAAGGRAVLSGDSLQLQPVASG 1118 Query: 1110 QPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGA 1169 PF L Q RSA DVA+MK+IVRQ+PELR AVY+L+ AL + V P QVPR GA Sbjct: 1119 APFTLMQQRSAIDVAVMKDIVRQSPELRPAVYALLEGRTGEALDTIRRVSPEQVPRDNGA 1178 Query: 1170 WAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLI 1229 + P SVTE ++E + + + AIV DYTGRT EAR QTLI Sbjct: 1179 YVPASSVTEIRQTREQRETQ---------------GDRVISAIVDDYTGRTAEARRQTLI 1223 Query: 1230 VTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVL 1289 VT N D +N+ IHD +AG+ G ++ V VL + L+ ++ H + L Sbjct: 1224 VTQTNADAMAINAGIHDRLHEAGKTGGYELPVTVLVREKTQTEALKSVAGLAQHSGHIAL 1283 Query: 1290 VDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTK 1349 ++ Y+ I +G++ L+DAEG L+S E+ + +++ IR+ GD +RFT+ Sbjct: 1284 INQQYYTIHSPDAANGVVMLRDAEGRDHLLSAFESSLRDIAVFSRREIRLSEGDLVRFTR 1343 Query: 1350 SDRERGYVANSVWTVTAVSGDS-VTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGA 1408 DRE+G +W V V+ + +TL G+ TR I+PG+E ++ H+D YA TAH AQGA Sbjct: 1344 QDREQGRDTQVLWEVIRVADNGDITLKHGEHTRLIQPGREMSDMHLDYGYAGTAHRAQGA 1403 Query: 1409 SETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHD 1468 SE F IAL G G R+ +A AYVALSRMKQHVQVYTD+ W ++ + + TAHD Sbjct: 1404 SEAFVIALAGATGARQRLASLSDAYVALSRMKQHVQVYTDDIGKWQASVAASKSRETAHD 1463 Query: 1469 VFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPARFIAPGRKYPQPYVA 1528 V + + D A+ L+ +AR L A GRA+LR+ GL S ARFI+ RKYP P+VA Sbjct: 1464 VLDVQQDFRATTAQNLWDSARTLNQNALGRALLRETGLPD-HSEARFISGSRKYPAPHVA 1522 Query: 1529 LPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGEGRVKGSGDAQFVALQGSRNGESLLADNM 1588 PA+DRNG+ GIWL + D+ ++G +GR G DA V LQ S NG +L A + Sbjct: 1523 WPAYDRNGRQQGIWLQEIRMDEEGRMQGLDEQGRWLGRDDAGVVVLQQSHNGVTLTASDP 1582 Query: 1589 QDGVRIARDNPDSGVVVRIAGEGRP-WNPGAITGGRVWGDIPDNSVQPGAGNGEPVTAEV 1647 + +AR +P+SGVV++ P W +T G+ G+ +++ + AE+ Sbjct: 1583 ASALALARQHPESGVVLQQDTAPLPGWLLQKLTQGQ--GETTPEAIKT-VQTAQNTDAEL 1639 Query: 1648 LAQRQAEEAIRRETERRADEIVRKMAENKPDLP-DGKTEQAVREIAGQERDRAAITEREA 1706 L+ + +EE R+E E+ E +++ E + LP + +T QA + ++ RAA +A Sbjct: 1640 LSLQTSEERARQEAEKAVRETLQQ-DETRNILPAESETLQAAENVVAEQEIRAA---GQA 1695 Query: 1707 ALPEGVLREPQRVREAVREIARENLL--QERLQQMERDMVRDLQKEKTL 1753 A E E + + E+A + QE+L+QME+++V D +EKTL Sbjct: 1696 AARE----EKENAQLLQHEVAALKHINGQEQLRQMEKELVID--REKTL 1738 >UniRef50_B2VB36 TraI protein n=1 Tax=Erwinia tasmaniensis RepID=B2VB36_ERWT9 Length = 1979 Score = 1091 bits (2821), Expect = 0.0, Method: Composition-based stats. Identities = 498/1807 (27%), Positives = 806/1807 (44%), Gaps = 146/1807 (8%) Query: 2 MSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRLP 61 MS+ + S+ A YY+ DNYY +G + W G+ AE++GL GSVD F LL+G P Sbjct: 1 MSVQTLSSSSGAAGYYSQADNYYFVGELLTGWHGKLAEEMGLSGSVDLKTFASLLDGITP 60 Query: 62 DGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEALA 121 DG + + HRPG DLTFSAPKS+S++A++GGD+RLI A ++V + ++E+ Sbjct: 61 DGRKMGK------NHRPGLDLTFSAPKSLSVLALVGGDERLIQAFQESVRDTITEIESFI 114 Query: 122 STRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDKVG 181 STRV D Q+ TG + A F HDTSR+ +PQLH H + N+T+ NG+ +LSSD Sbjct: 115 STRVTKDKQTSIETTGKGIFATFVHDTSRNLDPQLHMHVLTMNITEKNGKLYSLSSDNRY 174 Query: 182 KTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVE---AFSGRS 238 GF+E VY + FG + R L+++V LGY+T K G+WE+ GVPV FS RS Sbjct: 175 GNGFMEMVYTHHTLFGTIQRNILEKKVTTLGYQTRPTEK-GLWEIQGVPVSLLGHFSSRS 233 Query: 239 QTIREAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQR 298 + IR AVG+ AS SR +AALDTR KQ D + EW +++ GFD+ + A ++ Sbjct: 234 RDIRRAVGDSASFSSRSIAALDTRSPKQVPDRSELLNEWNAAIRDHGFDMGEFISTAREQ 293 Query: 299 ADLRTLTP------------------------GPASQDGPDVQQAVTQAIA--------- 325 A P++ + A Q A Sbjct: 294 AQDGPALGHDDARPADAEQEQEQEQEQEQGGDTPSNPAPQQDEAAARQKQATPGTPAVRP 353 Query: 326 ----GLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFT 381 L++R+ Q + + D+ + L L K F Sbjct: 354 EDTTQLAQREHQAEKQPHMQTVSQKEKKPDAPPRNLEQ--DDRVIHTALSSLSNRKRDF- 410 Query: 382 SGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYSDAVS-----VLAQDRPSLAIV 436 S V+ E++ + ++ + + +D + L D + + Sbjct: 411 SYTDVVLEIAASTENVVSLRYGEHLIDRAIETGKLIPLNDEKTRFTAQTLLIDEKVVVEL 470 Query: 437 S----GQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMN----MKQDERLSGELIT 488 + G +G ++ + L+ ++ + + R + D+ G +T Sbjct: 471 ARDHVANGLVSGTKKPLENLLPELADRPVTIFTAPSTVRGVKAVIDKVISDQEDRGRSVT 530 Query: 489 GRRQLLEGMA---------------------FTPGSTVIVDQGEKLSLKETLTLLDGAAR 527 F STVIVD E++S ++++ LL A Sbjct: 531 VLSPTASRRDQIAFATEEKMIFRDLSEPETTFARNSTVIVDNAERMSARDSINLLSHARE 590 Query: 528 HNVQVLITDSGQRTGTGSALMAMKDAGVNTYRWQGGEQRPATIISE-PDRNVRYARLAGD 586 +N+Q+++ ++ R+ + L +D G +T + + + + +S PD+ R +A + Sbjct: 591 NNLQLVLINTAGRSSQTNVLSLFEDGGASTGKVKTEHESLSVKVSHAPDKAQRGKDVASE 650 Query: 587 FAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGL--PEVTMTALSPVWLDSRSR 644 +AA+ V +++ +T IR+ LK G + V + A + V++ + Sbjct: 651 YAAAFADTVRPVVVAPTAQDRRQITDDIRASLKESGGIDGLAQGVMVEARNEVFMTIAEK 710 Query: 645 YLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLD-SSWS 703 +R G V+E R Y + + ++ SL L + +GE V+ S++ Sbjct: 711 KKVASWRTGYVIEDRTE--RKPQVYTVGSIAEETKSLILYNDKGERSTVKASAMGRKDVR 768 Query: 704 LFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDS 763 +F + V GE L+ + + + D L+V S +T + TL + Sbjct: 769 VFESTMIEVVPGEVLKASAALKNQGIRAKDSLRVHEASGREITGFNERTGKEFTLYTQEP 828 Query: 764 PFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRT 823 + A G+V G TV A++++ ++ +N L SG + +YS LDE T Sbjct: 829 VYAA----YGYVSGMGEVNRAEGTVIAALSKRDLNANNINSLNMSGSSLSIYSPLDEKAT 884 Query: 824 AEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFS 883 K+ V+E + + A + ++ A ++ K + TP A++ A+ V+ +++ Sbjct: 885 VSKIQNMNLRNTVTEYVISTAQKPDIDAATTYLKEHVATPMAIAVNRAIAGVQ--EVSVY 942 Query: 884 MVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTG-LLVSRASYEAEKS 942 LL+ A E+ EI+++I GDL+ ++ +V RA+YE EK Sbjct: 943 ATTLLSSALKLD-RRLTAAEVRNEIDSRIATGDLISLNGGTTTTDNPRVVPRATYEVEKD 1001 Query: 943 ILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQF 1002 IL + G PL+ RV ++ LT+GQ+ AT IL +D F VQG+AGVGKTT+ Sbjct: 1002 ILGMVTAGYATKQPLVIRVEEGKLDHLTAGQKGATGDILTGTDTFQFVQGFAGVGKTTKL 1061 Query: 1003 RAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDF 1062 + S +N L + G+GPTHRAVGEM AG+ AQT SF+ D+ + +G D Sbjct: 1062 TTLQSVLNELLP--GLEIRGIGPTHRAVGEMSGAGIHAQTAKSFVLDSLKDEANGVKQDH 1119 Query: 1063 SNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAAD 1122 NTLF++DE+SMVGN+DM LI GGRAV GD Q I G PF+L Q R+ A Sbjct: 1120 RNTLFIVDEASMVGNSDMRDTLGLIDRAGGRAVVIGDRQQFLPIESGAPFQLAQERTPAR 1179 Query: 1123 VAIMKEIVRQTP-ELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSH 1181 +++M++IVRQT LREAVYS IN D +L LE++ VPR+E + Sbjct: 1180 LSVMQDIVRQTNLALREAVYSTINGDHSGSLRQLEAISNDLVPRRE------------VY 1227 Query: 1182 SQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLN 1241 + + + A + + DY RT EAR T+++T N+ RR +N Sbjct: 1228 RENPRFSGASLQGNASS-----------STVAEDYLSRTDEARAGTMVITGTNKIRREIN 1276 Query: 1242 SMIHDVREKAGELG-KEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGI 1300 +I + G L V V V + + +W R +V+ D+ Y R+ + Sbjct: 1277 DLIQQGLVQDGSLSAARHVDVSVYSQILLPSTAFHDPDSWIRGR--VVINDSAYFRVEKV 1334 Query: 1301 SKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANS 1360 ++G+ G + R + + ++ + R GDR+ K+D + G +N Sbjct: 1335 G-NEGVTVRHMDSGLHQEWDYRGLDSTRMEMFDVEQTRFLEGDRVLLRKTDIDTGKTSNE 1393 Query: 1361 VWTVTAVSGD-SVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGT 1419 + + A+ + + L R+I P ++HIDL YA+T+ GAQGAS + I GT Sbjct: 1394 AYRIQAIRDNGQIVLEGKSGVRQIDPALTAQDRHIDLGYAVTSTGAQGASARYDIGFMGT 1453 Query: 1420 EGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAI--NNAVQKGTAHDVFEPKPDRE 1477 EG + + Y+ +SR K+H Q+YTDN +A N K TAHD+ + D Sbjct: 1454 EGAESRLTNARAYYILISRAKEHAQIYTDNTPAKLEAAIGINREPKHTAHDLLHARKD-- 1511 Query: 1478 VMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGK 1537 +A+ L A L AGR + L G S + ++ P V LPA+D NGK Sbjct: 1512 ASHAQTLSQFAASLDTFYAGRVLAESFSLDIGTSALKLLSRTPTAPL-RVMLPAYDYNGK 1570 Query: 1538 SAGIWLNPLTTDDGNGLRGFSGEGRVKGSGDAQFVALQGSRNGESLLADNMQDGVRIARD 1597 +G+ L G GE + + + F +Q E L A + D + +A Sbjct: 1571 VSGVNTWALAAARGEFSL---GEQQTQTESNTLFSVVQRGNTPEVLSAGTLSDALTLAGK 1627 Query: 1598 NPDSGVVVRIAGEGRPW------NPGAITGGRVWGDIPDNSVQPGAGNGEPVTAEVLAQR 1651 NP + V++ G + N IT + ++ + + AQ Sbjct: 1628 NPQASVILAPEGYEQHSVVLDVLNVDRITS-TMIDEVTRFTEETPEQTVNADDLPEPAQI 1686 Query: 1652 QAEEAIRRETERRADEIVRKMAENKPDLPDGKTEQAVREIAGQERDRAAITEREA-ALPE 1710 A+ E + + + + PD D E+ ++ + I + LP+ Sbjct: 1687 TADTTYDMPAENDTNNG-QAIDTDMPDYGDMNGYDDAPEMDTDWQEYSDIMDDSTPELPD 1745 Query: 1711 GVLREPQ 1717 L EPQ Sbjct: 1746 TDLPEPQ 1752 >UniRef50_A4WGU6 ATP-dependent exoDNAse (Exonuclease V) alpha subunit-helicase superfamily I member-like protein n=2 Tax=Enterobacteriaceae RepID=A4WGU6_ENT38 Length = 1807 Score = 1063 bits (2749), Expect = 0.0, Method: Composition-based stats. Identities = 486/1500 (32%), Positives = 775/1500 (51%), Gaps = 74/1500 (4%) Query: 266 QHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPA---SQDGPDVQQAVTQ 322 Q V PE + A + T + + T P P++ +AV Sbjct: 342 QDVSPERETANNQTEAQSTDTLSQPVHAGPGKMPSTGTSLREPQLHTDAPLPELAEAVRL 401 Query: 323 AIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTS 382 AI+ LS+ K +FT+ +++ L + + R ID ++ ++PLD EKG+FTS Sbjct: 402 AISQLSDSKTRFTFGELMLTAAE-LSDTLPDMNQVRQAIDVSLKEGMIVPLDSEKGVFTS 460 Query: 383 GIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGA 442 IH+LDELS++ALS++ +K V A+SV+ + +L +++ G Sbjct: 461 RIHLLDELSIQALSQEHLKSTAVVSFTRP----EQYAPPALSVVE--KDALVLMNAPSGV 514 Query: 443 AGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPG 502 AG R+ A+L ++ QGR+VQ++A+ +++++ + L L++ + L P Sbjct: 515 AGIRDLTAQLTGISLAQGRDVQVLASSAERALSLEKSDALRDRLVSRQHVLSGDFHLKPQ 574 Query: 503 STVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMKDAGVNTYRW-Q 561 ST+I++ E+L LKETL LL A + Q++ DS R G+A+ ++ AG+ R + Sbjct: 575 STLIIEGAERLGLKETLVLLGEARAQDAQLVFLDSAGRQANGNAMSVLESAGIARSRRTE 634 Query: 562 GGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQ 621 A ++S ++ RY LA +A E A V G REQ LT IR L+ Sbjct: 635 PAPGLEAEVVSITNKRDRYEALAIRYADLSGGAENVTAVVVGKREQTHLTGLIRDALQNA 694 Query: 622 GVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSL 681 G L V + A PVWLD+++R + YRPGMV+E + + H YVIDRV + L Sbjct: 695 GQLAREGVEIEARQPVWLDTKTRRMSGSYRPGMVLEDRSDKKERHS-YVIDRVHEDTRML 753 Query: 682 TLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVS 741 +L D G ++IS + + W L+ E + VA GERL + DRL+V +S Sbjct: 754 SLIDGDGVLTRMKISEVTADWRLYNRETLSVATGERLMSVAGDREHNLKAKDRLEVTQIS 813 Query: 742 EDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNAT 801 E + V R + + D P L + + +V PG +D+ V A++ + T Sbjct: 814 EKGIEV---KRGDDILMLPKDQP---LYVTHAYVSAPGGRDNDAGVVLAALNSRDISTQT 867 Query: 802 LNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALH 861 +N LA+SG ++++ D+ R +L R + + +++ +G+ + A+ ++ Sbjct: 868 MNSLAQSGHRAEVFTAEDQDRAEARLQRMKTNASPVQLVRSLSGKEDVSEAVGRLHDSVR 927 Query: 862 TPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVD 921 T A A+ A+ + + + FS + L + A+ + + F ++G EI++ +KRGDLL V Sbjct: 928 TEAGLAVWRAIN--DQRHVTFSELTLASAAEKYHPD---FDQIGDEISSMVKRGDLLKVS 982 Query: 922 VAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMIL 981 G LLV+R+++E EK+ILR + EGK PL+++VP ++ LT GQ+ AT ++L Sbjct: 983 A---GGEPLLVARSTWEMEKAILRVVDEGKNTQQPLLDQVPSAVLNGLTGGQKQATSLVL 1039 Query: 982 ETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVDAQ 1041 ++D+FT +QGYAGVGKTTQ +AV++A+ LP RP + GL PTH+AV EM GV AQ Sbjct: 1040 GSTDQFTGIQGYAGVGKTTQMKAVVAALETLPADARPALTGLAPTHQAVKEMSDVGVRAQ 1099 Query: 1042 TLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTD 1101 T+ SF+ + +GE PD+ + +FL+DESSM GN D A + IAAGGGRAV+ GD D Sbjct: 1100 TIKSFIVEHDQATAAGEKPDYKSQVFLIDESSMAGNQDTAALFQAIAAGGGRAVSMGDID 1159 Query: 1102 QLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTP-ELREAVYSLINRDVERALSGLESVKP 1160 Q +A+ G PF+L Q RS DVAIMKEIVRQ +LR AV+ +I+ ++ AL +E+ Sbjct: 1160 QFEAVDSGAPFKLMQERSPMDVAIMKEIVRQKDVQLRGAVHDIIDNRIDAALKRIEAQPV 1219 Query: 1161 SQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRT 1220 +V R+ A P+ + E T + IVRD+TGR+ Sbjct: 1220 DRVAREADATPPDSAFHETE--------------------------TPVDDIVRDWTGRS 1253 Query: 1221 PEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTW 1280 PEAR +TLI+T LN DR+ +N+ IH + GELG + VPVL+ E + W Sbjct: 1254 PEARARTLIITQLNADRQSVNAGIHRQLRERGELGNIAITVPVLDKITHTRHEFNKTQAW 1313 Query: 1281 ETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVG 1340 +V + Y + + ++ +T+++ EG L SPRE + V L+ + I V Sbjct: 1314 TAG--MVVKRGDRYQDVLAVDRNGNTVTVRNEEGKIGLYSPRELITGDVQLFKRNQIEVR 1371 Query: 1341 TGDRMRFTKSDRERGYVANSVWTVTAVSGDS-VTLSDGQQTREIRPGQEQAEQHIDLAYA 1399 GD +RFT +DRE+G AN +TV +VS + L + I P +A+QH+D +A Sbjct: 1372 QGDLLRFTATDREQGQTANQRFTVESVSEKGDIRLRGEKGMVTINPDSVRAQQHLDYGWA 1431 Query: 1400 ITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINN 1459 +T +GAQG S + I+LEGTE RK +A + Y++ SR K+HVQ+YTD + WT A+ Sbjct: 1432 VTGYGAQGTSTDYVISLEGTEEGRKALATRRAFYISASRAKEHVQIYTDGKADWTKAVTR 1491 Query: 1460 AVQK-GTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPARFIAP 1518 + TAHD P+ R+ A +++ + + A GRA +R G+ A+ I Sbjct: 1492 PERDIKTAHDALHPETQRQ--QARAIWAMGQPVSKTAIGRAWVRHQGMQDTSLTAKIIPA 1549 Query: 1519 GRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGEGRVKGSGDAQFVALQGSR 1578 R++P+P +ALP +D NGKSAG+ L L + L G+ R+ + A+ LQ S+ Sbjct: 1550 TRRFPEPALALPVYDNNGKSAGLALVSLVSSPEGRL--TQGDTRMVMTERARGAVLQRSQ 1607 Query: 1579 NGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPGAITGGRVWGDIPDNSVQPGAG 1638 +G + + ++ + + NP GVV + E + +TGG ++ Sbjct: 1608 SGHTHVVSDLGAALEAVKANPKDGVVWQTGEESPSSHLIKVTGGERQDAEERAAINVSRR 1667 Query: 1639 NGEPVTAEVLAQRQAEEAIRRETER-RADEIVRKMA-ENKPDLPDGKTEQAVREIAGQER 1696 + V E Q+ E+A+ +TE+ R E +R++A E P+ +A +E E Sbjct: 1668 ETDIVLPETEKQK-PEQAMSADTEKAREQEALRRIAEETLQIKPEFTGTEASQE--SNEP 1724 Query: 1697 DRAAI----TEREAALPEGVLREPQRVREAV----REIARENLLQERLQQMERDMVRDLQ 1748 DR+ + + + A + R ++ E A + + L ERD+VR + Sbjct: 1725 DRSTLKNIASSEDIAASDAARRHSEKAEIVQDRTPEERAGASRVVSELANSERDIVRQPE 1784 Score = 333 bits (853), Expect = 5e-89, Method: Composition-based stats. Identities = 151/328 (46%), Positives = 215/328 (65%), Gaps = 4/328 (1%) Query: 2 MSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRLP 61 MS+A V SAG A YY++ DNYY LG++ W G GA+ LGL+GSV D T +LEGRLP Sbjct: 1 MSVAPVASAGGAAGYYSNADNYYFLGNLQSLWLGEGAKALGLEGSVRGDDLTAVLEGRLP 60 Query: 62 DGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEALA 121 DG+ L + +G++ HRPG+DLTFSAPKSVS++ ++GGDK +++AHN AV A VE L Sbjct: 61 DGSRLGKEINGNHVHRPGHDLTFSAPKSVSILGLIGGDKAMVEAHNHAVRVAAGYVEKLI 120 Query: 122 STRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDKVG 181 S R DG + V T +V A F HDTSR+ +PQLHTH ++AN+T+ +G+WK L++D + Sbjct: 121 SARDTKDGVTSIVHTDKMVAAAFTHDTSRNLDPQLHTHLLIANMTEQDGKWKALATDYIH 180 Query: 182 KTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPV---EAFSGRS 238 GFIE V Q+ G++YR L++ VEALG+E E VGKHGMWE+ GVP + FS R Sbjct: 181 NAGFIETVMKMQVTLGKIYRSALRQHVEALGHEVEEVGKHGMWEIKGVPEDVRDEFSSRG 240 Query: 239 QTIREAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDA-ADQ 297 + I+ A+G +A+L+SRDVAA DTR++K M W+ +K+ G+D++AY+++ + Sbjct: 241 REIQGAIGAEATLRSRDVAAKDTRQAKVDPSRLRLMDRWLNQMKDKGYDLKAYQESVVPR 300 Query: 298 RADLRTLTPGPASQDGPDVQQAVTQAIA 325 A R P + V +++ Sbjct: 301 DAGPREAAMPPERVPPAATVRTVPESLT 328 >UniRef50_C8QEC8 Conjugative transfer relaxase protein TraI n=2 Tax=Pantoea sp. At-9b RepID=C8QEC8_9ENTR Length = 1938 Score = 1034 bits (2674), Expect = 0.0, Method: Composition-based stats. Identities = 511/1486 (34%), Positives = 747/1486 (50%), Gaps = 67/1486 (4%) Query: 263 KSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQ 322 K + W + + FDI A +R RT PG +V AV Sbjct: 378 KPETPDGRARLHERWQRQMDSVDFDIGGVMRDAREREAART-EPGEEPPLPGEVMDAVRT 436 Query: 323 AIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTS 382 AI+ LS+ + +FTY D+L ++ + E R +D+AIS L PLD +KG+FTS Sbjct: 437 AISVLSDSRTRFTYGDLLLTAHQAGEQQHSIPE-LRRALDQAISDNLLAPLDGDKGVFTS 495 Query: 383 GIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGA 442 IH+LDELSV++L+ DI+K+NRV E A R +AI++ Sbjct: 496 HIHLLDELSVQSLAADIIKENRVANFRESPGMTPEHLKQA------QRAPVAILNAPASV 549 Query: 443 AGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPG 502 R+ V ELV M+RE GREV ++A+ + + + L L+ R + + P Sbjct: 550 QRLRDTVEELVTMSRENGREVSVLASGAERALTLGKSALLKDTLLQRSRVTEKTFSLAPQ 609 Query: 503 STVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMKDAGVNTYRWQG 562 ST+I++ EKL LKE L L A N Q+L DS R +AL + AGV Sbjct: 610 STLIIEGAEKLGLKEMLVLTGEAREKNAQLLFLDSAGRQSNTNALSVLASAGVERLSLTA 669 Query: 563 -GEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQ 621 G A + S D+ RY LA F A V+G REQ LT IR L+ Sbjct: 670 PGPGLEARVFSIQDKRDRYRALAERFTDLSGPDNTVTAAVTGAREQQQLTGYIRDALQNA 729 Query: 622 GVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSL 681 G LG V + A +PV++ ++ R L YRPGMV+E + + + Y+IDRV + L Sbjct: 730 GKLGRDTVQVEARTPVFITAKERKLPVSYRPGMVLEDRS-DRQEIRHYMIDRVHDDTRML 788 Query: 682 TLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVS 741 +L D G V++S+L + W LF E++ +A GE+L + DRL V ++ Sbjct: 789 SLIDGDGVLSRVKLSTLTADWRLFTREQLSIAQGEQLFALAADRSAGLKARDRLTVTALE 848 Query: 742 EDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNAT 801 A+TV+ G+ +P + +D P L + +G+V PG ++ TV AS++ + Sbjct: 849 NGALTVMREGQQKPLRI-ATDRP---LYVTHGYVSAPGARDNERGTVLASLSSRELSVNM 904 Query: 802 LNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALH 861 +N LA+SG + +++ R EK+ R + ++ +G + A+ + L Sbjct: 905 MNALAQSGTEAEIFTGEALNRAEEKMMRLRTGRSPVALVRQASGREDVSDALETLNANLL 964 Query: 862 TPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVD 921 + A++A+ A+ + + ++FS V LL A+ F L EI Q+K GDL+ V Sbjct: 965 SDAEKAVSRAVAQM--RHVSFSEVKLLEGAEDF---LENVPALRTEIARQVKAGDLMPVK 1019 Query: 922 VAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMIL 981 V+ G VSRA++E EK+I+ I GK AV PLM + L+ LT+GQ+AAT +IL Sbjct: 1020 VS---GEPRFVSRATWEMEKAIIGEIAAGKNAVEPLMATIAPSLLTGLTAGQQAATTLIL 1076 Query: 982 ETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVDAQ 1041 ++ DRFT VQGYAG GKTTQF+AV +A+ LPES RP ++GL PTHRAV EMR G++AQ Sbjct: 1077 QSPDRFTAVQGYAGTGKTTQFKAVKAAIETLPESGRPLIIGLAPTHRAVKEMRDTGIEAQ 1136 Query: 1042 TLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTD 1101 TL SF+ D Q + +GE + NTLFL+DESSM+GN D A AY IAAG GRAV GD Sbjct: 1137 TLKSFVLDWQQRTAAGEEVRYGNTLFLIDESSMLGNQDTAAAYRAIAAGDGRAVPVGDVA 1196 Query: 1102 QLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPE-LREAVYSLINRDVERALSGLESVKP 1160 QL++ G PFRL Q RS DVA+MKEIVRQ L+ AVYS+I AL + V P Sbjct: 1197 QLESPESGAPFRLMQERSPIDVAVMKEIVRQRDANLKSAVYSVIENKAAAALEKINRVSP 1256 Query: 1161 SQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRT 1220 VPR+ G P SVTE + IV DY GRT Sbjct: 1257 GTVPREAGEVVPLRSVTETG--------------------------SPVSNIVADYIGRT 1290 Query: 1221 PEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTW 1280 AREQT+IV L+EDRR +N IH + ELG++ V VPVL+ + R+ W Sbjct: 1291 KAAREQTMIVVQLHEDRRAINEGIHASMVQRKELGEKAVTVPVLDRITGGRHDFNRIGDW 1350 Query: 1281 ETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVG 1340 + + +VL + Y + G + G + L+D G + SP E A + ++ I + Sbjct: 1351 KAGQ--VVLANERYLTVTGADRGTGHVLLRDESGRMQYWSPAELNATEIEVFERREIELR 1408 Query: 1341 TGDRMRFTKSDRERGYVANSVWTVTAVSGD-SVTLSDGQQTREIRPGQEQAEQHIDLAYA 1399 GD +R K+ ++ G+ A+ + V + + + L + + I P A++H+D A+A Sbjct: 1409 EGDSVRLNKTQKQAGHAAHEQYRVAELRENGEIVLKNRDGEKVIDPKAVTADRHVDYAWA 1468 Query: 1400 ITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAIN- 1458 +T +GAQGAS + IALEGTEG R M+G + Y++ SR K HVQ+YTD + W + + Sbjct: 1469 VTGYGAQGASTDYVIALEGTEGARANMSGMRAFYISASRAKDHVQIYTDGLKDWLETLQG 1528 Query: 1459 NAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPARFIAP 1518 TAHD P+P+R A +++ + L A GRA LR GL G AR I P Sbjct: 1529 GKNGPATAHDALSPEPER--AQARAIWAMGQPLSKTALGRAFLRGQGLKGAPLTARIIPP 1586 Query: 1519 GRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGEGRVKGSGDAQFVALQGSR 1578 +KYP ++ALP +D NGK+AG+ L PLT + G + GE R +G AQ +Q SR Sbjct: 1587 TKKYPDAHLALPVYDGNGKTAGLTLVPLTAEAG---QPEPGEVRQLITGGAQAAIVQKSR 1643 Query: 1579 NGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPGAITGGRVWGDIPDNS-----V 1633 +GE ++ ++Q + AR+ P +GV++ + GG+ ++ V Sbjct: 1644 DGEMIIVSDLQQALAAARNKPQAGVLLLTGRHPPSAQLLKVAGGQPGRGWRPDATLLRLV 1703 Query: 1634 QPGAGNGEPVTAEVLAQRQAEEAIRRETERRADEIVRKMAENKPDLPDGKTEQAVREIAG 1693 Q G +E A E ++ +N P P + Q Sbjct: 1704 QAELREGLRDLPPDAP--VPDERAALRAALDALEKGQETGQNVPSAPGRDSAQ--ENSRD 1759 Query: 1694 QERDRAAITEREAALPEGVLREPQRVREAVREIARENLLQERLQQM 1739 +TE A P V +R R + + +++ QQ+ Sbjct: 1760 VRAIAQQLTEGAMASPGTVPVVTERDRAQLSALLAMRVVEAMKQQL 1805 >UniRef50_B6ESZ2 Protein TraI (DNA helicase I) n=1 Tax=Aliivibrio salmonicida LFI1238 RepID=B6ESZ2_ALISL Length = 1936 Score = 978 bits (2528), Expect = 0.0, Method: Composition-based stats. Identities = 392/1554 (25%), Positives = 708/1554 (45%), Gaps = 136/1554 (8%) Query: 1 MMSIAQVRSAGSAGNYYTDKD-----------------------NYYVLGSMGERWAGRG 37 M+SI+ + SAG A YY D + NYY+ S W G+ Sbjct: 1 MISISPIASAGEATKYYLDDEKHLNGEQSELTTEKENSESDKEKNYYLKDSNNTAWFGKL 60 Query: 38 AEQLGLQG-SVDKDVFTRLLEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAML 96 A + GL G ++ D +L G L D + ++HR G+DLTFSAPKSVS++A++ Sbjct: 61 ATEKGLDGKPIEGDTLQAVLSGSLLDE----TIHGKRDKHRAGFDLTFSAPKSVSVLALV 116 Query: 97 GGDKRLIDAHNQAVDFAVRQVEALASTRVMTD---GQSETVLTGNLVMALFNHDTSRDQE 153 GGD RL+D HN AV FA+ ++E A+ T+ + + +++ L H TSR+ + Sbjct: 117 GGDTRLLDGHNNAVKFALSELEKDAAQVKYTEEDTKKQSYANSKSMLFGLVQHKTSREDD 176 Query: 154 PQLHTHAVVANVTQHN-GEWKTLSSDKVGKTGFI----ENVYANQIAFGRLYREKLKEQV 208 PQLHTHA+ AN+T+ G + L++ G I E VY NQ+ +G LY+ L +Q Sbjct: 177 PQLHTHALTANMTRDEQGRLRALATSLKQSGGVINGTMERVYNNQLYYGMLYQSHLSKQA 236 Query: 209 EALGYETEVVGKHGMWEMPGVP---VEAFSGRSQTIREAVGEDA--SLKSRDVAALDTRK 263 E+LGY + G +G +E+ GVP ++ FS RSQ I E + S ++RD+AA +TRK Sbjct: 237 ESLGYTIKGAG-NGQFEIEGVPQSLMDDFSKRSQQINEKTQDLGFNSQQTRDLAAKNTRK 295 Query: 264 SKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQA 323 +K H D + W T+K GFDI A+ + A + + + P A+T+ Sbjct: 296 AKTHKDAVELNSTWQHTVKTDGFDITAFINNAKEN----PVKAPNENVIKPRAVDALTRT 351 Query: 324 IAGLSERKVQFTYTDVLARTVGILPP-ENGVIERARAGIDEAISREQLIPLDREKGLFTS 382 I LS+ + Q +Y +++ + E + +DE I+ ++LI LD+ FT+ Sbjct: 352 INHLSKTQTQLSYEKMVSFAMSEFTKGEKLDALDIKLALDERIASKELIGLDKNNSQFTT 411 Query: 383 GIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYSDA--VSVLAQDRPSLAIVSGQG 440 + +E + ++ + R + + ++ L V+ Sbjct: 412 TALLNNEKKLINSTKGRPRHMRTQPNDTALSQLNLNKENQNKLAELFLSTKQFNTVN--- 468 Query: 441 GAAGQRERVAE-LVMMAREQGREVQIIA----ADRRSQMNMKQDER---------LSGEL 486 G E+VA+ L+ + E G+ + I+ + +++ +K+ + Sbjct: 469 -VFGSSEQVAKGLLHVGSESGKRIHIMTQGGISQEKTERTIKRQSHTPLQWIKNTFRADF 527 Query: 487 ITGRRQLLEGM--AFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSG-QRTGT 543 + G Q L F+ + + K S + + + + A N +++ + R G Sbjct: 528 VHGVNQYLGDKVTPFSNKDVFVFEDSGKFSGDQLIDITNKAKHTNSKIIFLNHASARQGM 587 Query: 544 GS-ALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVS 602 S + M + G Q I D N+ L +A + +++ QV Sbjct: 588 KSHSSMDLLSKGNTNNINWVNNQPTKAKIKIHDNNLN--ELVNQYA---EKPDKNTIQVL 642 Query: 603 GVREQAI--LTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWN 660 + L AIR LK G + V+++ L+P +L R L Y+PGMV+ W+ Sbjct: 643 ATTNADVKTLNTAIRERLKQTGEVSRQGVSISTLNPHFLSQEQRTLSTHYKPGMVLRSWS 702 Query: 661 PETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRV 720 S +Y++ + ++++L + D +G + S ++S+F+ E + +A G+++ Sbjct: 703 EGAMS--QYIVSKPHRKTNTLDIIDEKGNQLTIDPSKPAHNFSVFKKESLEIASGDKIIT 760 Query: 721 TGKIPGLRVSGGDRLQVASVSEDAMTVV-VPGRAEP-ATLPVSDSPFTALKLENGWVETP 778 +GK +++ V + ++T+ G+ + T ++D+P T + + T Sbjct: 761 SGKHYASQLAAHQAFIVKKATPQSITLEDREGQQKTIKTKHLTDAPIT-----HNFASTT 815 Query: 779 GHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEK---------LAR 829 + + + LN L+ + ++ +++ E A+ + R Sbjct: 816 QKISDTATHLMVQTKAYSASKELLNELSLNRNNIDIFTDDKEKVAAQFEKNEVRPAAIER 875 Query: 830 HPSFTVVSEQIKTRAGETSLETAISHQKSALHTPA----QQAIHLALPVVESKKLAFSMV 885 + T +E+ + ++ + L+TP ++A++ A+ + K+ ++ Sbjct: 876 VMATTQPTEKYLSTLTTNTVTKDVEQALRLLNTPTSNNIEKAVNFAIHHISEKEAGYTQK 935 Query: 886 DLLTEAKSFAAEGTGFTELGGE--INAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSI 943 +L+ +A ++ E TG T + E I+ + L + + G ++ + EK+I Sbjct: 936 ELVMQAIRYSLEETG-TAISKEDIIDTLKNNQETLSSEFSDGT---RWTTKDAIHTEKTI 991 Query: 944 LRHILEGKEAVMPLMERVPG----ELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKT 999 L + GK P + + +LT GQ+ + MI T DRF VQG AG GK+ Sbjct: 992 LDTLARGKNQTTPFVTHAQATEFLQHESRLTQGQKESVHMIATTPDRFVAVQGLAGTGKS 1051 Query: 1000 TQFRAVMSAVNMLPE--SERPRVVGLGPTHRAVGEMRSAGVDAQTLASFLHDTQLQQRSG 1057 T + ++ + + ++ ++GL PTH AV E+++ GV+AQTL S L D Q + + Sbjct: 1052 TMLEKDIELIHSIDKLSNKETTILGLAPTHAAVNELKNKGVEAQTLQSLLADIQSGKTTA 1111 Query: 1058 ETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQT 1117 T + TLFLLDESSM+GN DM AL+ +AV GD QLQ+++ G+PF L + Sbjct: 1112 NT--YQQTLFLLDESSMIGNNDMKHFTALVEKSDAKAVLLGDKAQLQSLSAGKPFELAMS 1169 Query: 1118 RSAADVAIMKEIVRQ-TPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSV 1176 +A + M +IVRQ L AV++++++ E +LS L+ Q P + H V Sbjct: 1170 SNALNRTDMTDIVRQQNDTLLGAVHNMVDKQPESSLSKLK-----QQPNADTGIHKTHHV 1224 Query: 1177 TEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNED 1236 E Q+ A K L + +DY RT +++E TLI+ + N++ Sbjct: 1225 VSTYEKITPNHRENQEIATEK----------LAHVVAQDYLSRTEQSQEDTLIIAYTNKE 1274 Query: 1237 RRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHR 1296 R + I +++ +L KE ++P L + E+ + ++ + + Sbjct: 1275 RDTITEHIRHGLQQSNQLHKENTLMPRLRSIGATKEEMATMLPYKKGL-VVKTGKDTLST 1333 Query: 1297 IAGISKDDGLITLQD-AEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERG 1355 I + L+T+++ + G R P+ + + L+T + T D++ +D+++G Sbjct: 1334 IIHVDNKHNLVTVKEQSTGKERPFFPKNSDHKMTNLFTRSDQPLSTNDKVMMRMTDKDKG 1393 Query: 1356 YVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIA 1415 AN+ +TV+ + + +TLS+ +Q + + H D +Y TA+ AQGA+ I Sbjct: 1394 IEANTPYTVSNIENNLITLSNKKQHTITLSTTDLKDAHWDYSYTRTANMAQGATYKNVIT 1453 Query: 1416 LEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTD-AINNAVQKGTAHD 1468 R + AY+ L+R +HV++YTDN +NN K +A + Sbjct: 1454 AI---KGRGQLTNIRRAYIDLTRASEHVKLYTDNEGTMIKQWLNNQDDKRSAIE 1504 Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 40/320 (12%), Positives = 107/320 (33%), Gaps = 12/320 (3%) Query: 1183 QEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNS 1242 + +A + +V Y + + Q ++ N D + LN+ Sbjct: 597 SKGNTNNINWVNNQPTKAKIKIHDNNLNELVNQYAEKPDKNTIQ--VLATTNADVKTLNT 654 Query: 1243 MIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVY--HRIAGI 1300 I + ++ GE+ ++ V + LN + + + ++ + + ++ Sbjct: 655 AIRERLKQTGEVSRQGVSISTLNPHFLSQEQRTLSTHYKPGMVLRSWSEGAMSQYIVSKP 714 Query: 1301 SKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANS 1360 + + + D +GN I P + +++ +++ + +GD++ + A+ Sbjct: 715 HRKTNTLDIIDEKGNQLTIDPSKPAHN-FSVFKKESLEIASGDKIITSGKHYASQLAAHQ 773 Query: 1361 VWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTE 1420 + V + S+TL D + ++ + + I +A T + T + Sbjct: 774 AFIVKKATPQSITLEDREGQQKTIKTKHLTDAPITHNFASTTQKI-SDTATHLMVQTKAY 832 Query: 1421 GNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMN 1480 K + LS + ++ ++TD+++ + A + Sbjct: 833 SASKELLNE------LSLNRNNIDIFTDDKEKVAAQFEKNEVRPAAIERVMATTQPTEKY 886 Query: 1481 AERLFSTARELRDVAAGRAV 1500 L + A R + Sbjct: 887 LSTLTTNTVTKDVEQALRLL 906 >UniRef50_Q8D674 ATP-dependent exoDNAse, alpha subunit n=14 Tax=Vibrionales RepID=Q8D674_VIBVU Length = 1928 Score = 975 bits (2521), Expect = 0.0, Method: Composition-based stats. Identities = 409/1556 (26%), Positives = 675/1556 (43%), Gaps = 143/1556 (9%) Query: 1 MMSIAQVRSAGSAGNYYTDK----------------DNYYVLGSMGER---WAGRGAEQL 41 MMSI+ +RS +A YY ++ DNYY+ W G+ A++ Sbjct: 1 MMSISPLRSPSNAAQYYLNEENTQDLPDTSLEKDASDNYYLKEKQQGENTFWHGKLAQEA 60 Query: 42 GLQG-SVDKDVFTRLLEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDK 100 GL G V++ +L G L D ++ H+ G+DLTFSAPK+ S++A++GGD Sbjct: 61 GLLGKPVEQKTLETILSGTLNDE----TIKGKREDHKSGFDLTFSAPKNASILALVGGDS 116 Query: 101 RLIDAHNQAVDFAVRQVEALASTRVMTD--GQSETVLTGNLVMALFNHDTSRDQEPQLHT 158 RLI+AHN AV FA+ ++E + T+ G+ E T +++ A+ H TSR+ +PQ+H+ Sbjct: 117 RLIEAHNNAVKFALSELEKDVAQATHTNEAGEREFHNTQSMIFAVVRHKTSRNNDPQVHS 176 Query: 159 HAVVANVTQH-NGEWKTLSSDKVGKTGFI----ENVYANQIAFGRLYREKLKEQVEALGY 213 HA+ AN+T+ G +TL+S+ K G I E +Y Q + LY+ + + E LG+ Sbjct: 177 HALAANMTRDQEGNLRTLASNLKQKGGVINGSGERIYNFQKYYTALYQSQFARESEELGF 236 Query: 214 ETEVVGKHGMWEMPGVPV---EAFSGRSQTIREAVGE--DASLKSRDVAALDTRKSKQHV 268 +T+ +G + +++ GVP +AFS R Q I + V E + SRD AALDTR+ K + Sbjct: 237 QTKGLG-NAQFDIDGVPESLHKAFSTRKQQIDQQVMEFGHDTQASRDTAALDTRQRKTYH 295 Query: 269 DPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLS 328 +W QT+K GFD + P +A + A+ L Sbjct: 296 SDSTLNHKWQQTVKGEGFDPALLVKQSQ-------AMPQKGGHAMQQAHEAFSHAMTHLG 348 Query: 329 ERKVQFTYTDVLARTVGILPP--ENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHV 386 + + V+ + + DE I QL+PL EKG +TS + Sbjct: 349 QYSTSLSLEKVIEVAASDFTKGTQQANAIDLKQVADEWIKNGQLVPL-AEKGHYTSQTML 407 Query: 387 LDELSVRALSRDIMKQNRVTVH--PEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAG 444 +E ++ +++ R + + V+ L +V+ G Sbjct: 408 KNEKALMDITKGRTHNMRTNIDEPTLNRLNIAQDNRQKVADLYGSTKQFHVVN----VFG 463 Query: 445 QRERVAE-LVMMAREQGREVQIIAADRRSQMNMKQD-ERLSGELITGRRQLLEGMA---- 498 E++A+ L+ G+ VQ+++ + + + +Q+ R S +T + L + Sbjct: 464 SSEQIAQNLLNAGNHSGKRVQLVSQNTQHHRHNQQNIPRESHTFVTWVKHLFQDDQRHTL 523 Query: 499 ---------FTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITD---SGQRTGTGSA 546 T ++VD K+S E L+L + A N +V++ + + Q SA Sbjct: 524 QGLLDSKHPLTNKDIILVDNANKMSANELLSLSEKAGNSNSKVILLNRVSNRQGMKAHSA 583 Query: 547 LMAMKDAGVNTYRWQGGEQRPATI--ISEPDRNVRYARLAGDFAASVKAGEESVAQVSGV 604 + V T+ W +Q + + + D N +A +A V SGV Sbjct: 584 IDLYSKGNVTTHTWVNSKQADSVVRLHNREDHN-----IALTYADLPDKTNAQVLATSGV 638 Query: 605 REQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETR 664 EQ LT IR+ LK G L VT+ P +L + Y+ GM + QW+ Sbjct: 639 -EQRRLTNEIRAALKNDGQLSRTSVTVFTQQPHYLSKPQQQFAKHYQSGMTLRQWDKGK- 696 Query: 665 SHDRYVIDRVTAQSHSL-TLRDAQGETQVVRISS---LDSSWSLFRPEKMPVADGERLRV 720 +VI V S++L L G+ SS + L++P+ + ++ GER+ Sbjct: 697 -PHDFVIASVDKASNTLEVLSKTDGKASTFDPSSKAFQSMNMQLYKPDALEISQGERILA 755 Query: 721 TGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGH 780 T K ++ G V S++++++T+ + + +TLP+ L + + H Sbjct: 756 TNKHFPSQLEAGHHYLVTSITKNSLTL-TNQQGQSSTLPL--DKLKDAPLTYDYAHSANH 812 Query: 781 SVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETR--TAEKLARHPS---FTV 835 T+ S + A LN L S + +++ E EK PS + Sbjct: 813 FEPREHTLL-SGKAFTLSKALLNDLTESSARLDIFTDHPEKAQQALEKAEVRPSAIERVL 871 Query: 836 VSEQIKTR----AGETSLETAISHQKSALHTP-----AQQAIHLALPVVESKKLAFSMVD 886 ++ I R A E++L I H L +Q+A+ AL + K+ F+ + Sbjct: 872 HTQHINDRYLSEATESTLRHDIEHAIGVLAKEQHAPVSQKAVDFALNHLSEKEAGFTQKE 931 Query: 887 LLTEAKSFAAEGTGFTELGGEINAQI-KRGDLLYVDVAKGYGTGLLVSRASYEAEKSILR 945 L+ EA FA E T I A++ +R D L + + G + A+ E EK IL Sbjct: 932 LVIEAVRFAFEETNSPITKAHIEAELAERSDTLSAEYSDGT---RWTTEAAIETEKHILS 988 Query: 946 HILEGKEAVMPLMERVPG----ELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQ 1001 +I +GK P E LT GQ+ + +I T D F +QG AG GK+T Sbjct: 989 NIEQGKGQHSPFATSKQVHSYLEAQSCLTHGQKNSIHLISTTKDSFVAIQGLAGTGKSTM 1048 Query: 1002 FRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPD 1061 + + +++ +++GL PTH AVGE+ S GV AQTL S L D + + S E D Sbjct: 1049 LETNIELIAQAGKNQPDQIIGLAPTHSAVGELESKGVKAQTLESLLTDIRQGRASPE--D 1106 Query: 1062 FSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAA 1121 + NTLF LDESSMV N L+ +AV GD +QL ++ G+PF L T+ Sbjct: 1107 YKNTLFFLDESSMVSNKQAKELTDLVLQSQSKAVLLGDKEQLLSLNAGKPFELAMTKGII 1166 Query: 1122 DVA------IMKEIVRQ-TPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEH 1174 D A M +I+RQ AV++++++ + AL L + + + Sbjct: 1167 DTAQIIESEQMTDIIRQRNKATLGAVHNILDKQPDSALDKLSQQGADKQGKTQH------ 1220 Query: 1175 SVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLN 1234 ++ +A L + +DY RT E RE TLI+ + N Sbjct: 1221 -----------VISTLTDNPQDPRKAQQIATEKLPYEVAQDYLSRTQETRENTLIIAYTN 1269 Query: 1235 EDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVY 1294 +R + I K ELGKE V+VP L + EL+ + ++ L Y Sbjct: 1270 NERDAITEHIRHGLIKKNELGKENVIVPRLRSIGASGEELKTMMPYQKGL-VLSTKPGQY 1328 Query: 1295 HRIAGISKDDGLITLQDAE-GNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRE 1353 I + + G++ ++ E G PR + L++ + TGD++ +D+ Sbjct: 1329 GTITKVDSEHGVVVVKSHETGKESAFLPRHRDHKFTALFSVSHKPLSTGDKIITRFTDKT 1388 Query: 1354 RGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFA 1413 RG AN V + ++V ++ + H D AY TA AQGA+ Sbjct: 1389 RGIKANVVHHIVQADNNAVIAQSKNGQSLTIDPEKIKDGHWDYAYTRTADMAQGATYQNV 1448 Query: 1414 IALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDN-RQGWTDAINNAVQKGTAHD 1468 I + + + AY+ L+R +HV++YTDN +Q ++ V K +A + Sbjct: 1449 IT---SIKGKGALTNLRRAYIDLTRASEHVRLYTDNPKQMMKSWLSKEVNKASAIE 1501 >UniRef50_D0Z588 IncF plasmid conjugative transfer DNA-nicking and unwinding protein TraI n=3 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z588_LISDA Length = 1980 Score = 972 bits (2511), Expect = 0.0, Method: Composition-based stats. Identities = 393/1572 (25%), Positives = 684/1572 (43%), Gaps = 145/1572 (9%) Query: 1 MMSIAQVRS-AGSAGNYYTDKD--------------------------------NYYVLG 27 M+S++ +R A A YY +++ NYY+ Sbjct: 1 MLSLSSLRGGASGASKYYLEEEKQLHLNQPQFTLKTDTQPTKDSPLPPTDNPTANYYLAE 60 Query: 28 SMGE----RWAGRGAEQLGLQG-SVDKDVFTRLLEGRLPDGADLSRMQDGSNRHRPGYDL 82 G +W G+ AE+ G+ G ++ +L G+L + + S+ R GYDL Sbjct: 61 QSGTKKTTQWYGKIAEKEGILGHEIEHQKLEAVLNGQLNNDQ---TPRAHSDTRRTGYDL 117 Query: 83 TFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEA-LASTRVMTDGQSETVLTGNLVM 141 FSAPK S++A++ GD R+IDAHN AV A+ +E A +V + + T NL+ Sbjct: 118 VFSAPKGASILALVYGDTRIIDAHNAAVKTALDLLEQDTAQAKVTENKEGRFENTQNLLF 177 Query: 142 ALFNHDTSRDQEPQLHTHAVVANVTQHN-GEWKTLSSDKVGK----TGFIENVYANQIAF 196 L H T+R+ EPQLHTHA+ AN+T N G K L+S V G E + N + Sbjct: 178 GLVQHKTNRNNEPQLHTHALQANMTYDNQGNLKNLASSFVQNGFETQGTYERILENAKYY 237 Query: 197 GRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP---VEAFSGRSQTIREAVGE--DASL 251 G Y +L +E +G+ + +G +G ++ G+P +EA S R + I E E +S Sbjct: 238 GMAYHSELGRALEGMGFAIKSLG-NGQIDIDGIPTEVIEANSTRREEILEYANETGHSSG 296 Query: 252 KSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAA---DQRADLRTLTPGP 308 KSR +AA TRK+K + + + EW + FD A+ A+ + R D P Sbjct: 297 KSRMIAAHQTRKAKTYTPEDSLVKEWQTKNEALKFDGLAFVAASYNGEHRKDNDISVPDK 356 Query: 309 ASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGV-IERARAGIDEAISR 367 ++QQA+ +I+ LS+R F Y VL + P+ + + +D I Sbjct: 357 ------ELQQAIDNSISYLSDRLSAFGYEKVLVTALDKFAPKAITQMGELKQALDNKIKH 410 Query: 368 EQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYS-DAVSVL 426 LI LD ++ LFT+ V E + ++ + + + VH + + D L Sbjct: 411 GDLIALDDKQSLFTTQEQVDREAKLIESTQ--KRTHGLRVHADSTALNELNLKADTKKTL 468 Query: 427 AQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDER----- 481 A S V+ + ++ L+ ++ G+ + I ++ + +Q R Sbjct: 469 ADILASTKQVNVVNLSGSSKQLSESLLHVSENSGKSIHFITPNKLVKQQTEQQVRRQAFS 528 Query: 482 --------LSGELITGRRQLL---EGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNV 530 +++ Q L E T S ++V+ +L +KET L+D A R Sbjct: 529 VTQWVKNAFRPDVVHTAYQYLNQAERRQKTKDSILVVEHANQLGVKETQQLIDLAQRQGN 588 Query: 531 QVLITDSGQRT---GTGSALMAMKDAGVNTYRWQGGEQRPATI-ISEPDRNVRYARLAGD 586 +++ + +R+ G+A+ ++ V T+ WQG + I SE D+ R+ LA Sbjct: 589 KLVFLNHTKRSQGLRAGNAMDVVQKGNVQTHTWQGAQLAQTHIKTSEVDKKERHQILAER 648 Query: 587 FAASVKAGEESVAQVSGVR-EQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRY 645 + K ++ + + L + IR +L G L V + L+PV++ + Sbjct: 649 YQELSKQERSETQVLTTNKGDNDNLNRVIRHQLDKSGQLSEKRVEIPTLNPVFMSPEQQR 708 Query: 646 LRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLF 705 Y+ GMV+ Q N +Y +++V +++ +L L D+ + + + + + Sbjct: 709 SIKSYQKGMVISQVNDGKVQ--QYTVEKVNSRAQTLQLLDSDNNRSYLNVKESSTPYFVS 766 Query: 706 RPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPF 765 +P+K+ VA G+RLR+ G + + D + V + +++ + +P+S Sbjct: 767 QPDKIEVATGDRLRINGDVFRTDLKQNDTVTVEKIGWMGLSL-TDDNGKGHLVPLSYLEG 825 Query: 766 TALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSG-RDVRLYSSLDETRTA 824 +A L G+ T ++ T + TL L + G + + +++ E A Sbjct: 826 SA--LSYGYANTLNNAAHGKTTTLVEMQSYTASKETLYELMQQGSKQLHIFTDNQEKLEA 883 Query: 825 --EKLARHPSF--------TVVSEQIKTRAGETSLETAISHQKSALHTP------AQQAI 868 EK PS + + + + ET L++ ++ AL +QA+ Sbjct: 884 RMEKSHIQPSSMARVMASTQSLDKYVNAQTAET-LQSDVTMAVQALLDQQAPKPLIEQAV 942 Query: 869 HLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGT 928 + AL V ++ F +L+ EA FA + G T L EI+ ++ ++ + Sbjct: 943 NFALDHVSEQQAGFKHSELVVEAIRFAMDEKGTTVLESEIHNKLNELQQQDSVLSAQFSD 1002 Query: 929 G-LLVSRASYEAEKSILRHILEGKEAVMPLMERVPGEL----MEKLTSGQRAATRMILET 983 G ++ + + EK IL + GK V + + +T GQ+ A +++ T Sbjct: 1003 GTRWTTKEAIDTEKRILTRLDAGKGQVASYASERQADAYLAQQDWMTDGQKEAIKLMATT 1062 Query: 984 SDRFTVVQGYAGVGKTTQF---RAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVDA 1040 +DR+T+VQG+AGVGK+T + ++ L + V+GL PTH AV E++ G+ A Sbjct: 1063 NDRYTIVQGFAGVGKSTMLEQGKTLIEQTQALHGNANIDVLGLAPTHAAVNELKEKGIPA 1122 Query: 1041 QTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDT 1100 QT S L D + + + NTLFLLDESSM N AL+ G RA GD Sbjct: 1123 QTTQSLLKDLLTGDTTPDK--YKNTLFLLDESSMASNAQFDAFTALVNNSGARATLLGDI 1180 Query: 1101 DQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQ-TPELREAVYSLINRDVERALSGLESVK 1159 QLQ+ G+PF L + D +MK+I RQ TPEL AV ++IN+ E L ++ Sbjct: 1181 YQLQSKEAGKPFELAYRSKSVDTVVMKDIQRQQTPELLSAVQNVINQQSESMLEAIKQQS 1240 Query: 1160 PSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGR 1219 P + + + LY++ +Y R Sbjct: 1241 PLP-----------------GSHHNQTVVSTYNETGNSAKDREVAKEELYQSAAAEYLSR 1283 Query: 1220 TPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGEL-GKEQVMVPVLNTANIRDGELRRLS 1278 TPE+RE TL++ + N +R +L +I ++ EL K V L EL+ + Sbjct: 1284 TPESRENTLMIAYSNRERDILAGLIRKGLKEMKELLDKSDTPVTRLRGIGTTKEELKTMM 1343 Query: 1279 TWETHRDALVLVDNVYHRIAGISKDDGLITLQD-AEGNTRLISPREAVAEGVTLYTPDTI 1337 ++ + + Y I I + + L+ + + G P + TL++ + Sbjct: 1344 PYKAGL-IINTGRDTYLHIDSIDRRNELLMVTNMTTGEQTSFIPARHDHKMTTLWSSSEM 1402 Query: 1338 RVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLA 1397 + +GD++ + K+D+E G N TV+ ++ D++ LS+ + H D Sbjct: 1403 PLTSGDKITWRKTDKELGLTGNMDLTVSDINKDTIMLSNNDGKHVTLSLSDMKSSHWDYR 1462 Query: 1398 YAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGW-TDA 1456 Y TA AQG++ I++ +E + AY+ +SR QH ++TDN +G Sbjct: 1463 YTKTADMAQGSTTNHVISVIDSEAK---LTNLRRAYIDISRASQHAMIFTDNEKGLMRSW 1519 Query: 1457 INNAVQKGTAHD 1468 +N+ +A + Sbjct: 1520 LNHFDNNSSAIE 1531 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 65/406 (16%), Positives = 141/406 (34%), Gaps = 19/406 (4%) Query: 1110 QPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLES--------VKPS 1161 FR +A E ++T + V V+ ++ V + Sbjct: 535 NAFRPDVVHTAYQYLNQAERRQKTKDSILVVEHANQLGVKETQQLIDLAQRQGNKLVFLN 594 Query: 1162 QVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTP 1221 R +G A + + + Q A + ++ + Y + Sbjct: 595 HTKRSQGLRAGNAMDVVQKGNVQTHTWQGAQLAQTHIKTSEVDKKERHQILAERYQELSK 654 Query: 1222 EAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWE 1281 + R +T ++T D LN +I +K+G+L +++V +P LN + + R + +++ Sbjct: 655 QERSETQVLTTNKGDNDNLNRVIRHQLDKSGQLSEKRVEIPTLNPVFMSPEQQRSIKSYQ 714 Query: 1282 THRDALVLVDNVY--HRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRV 1339 + D + + ++ + L D++ N ++ +E+ + PD I V Sbjct: 715 KGMVISQVNDGKVQQYTVEKVNSRAQTLQLLDSDNNRSYLNVKESSTPYF-VSQPDKIEV 773 Query: 1340 GTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYA 1399 TGDR+R N TV + ++L+D + P + YA Sbjct: 774 ATGDRLRINGDVFRTDLKQNDTVTVEKIGWMGLSLTDDNGKGHLVPLSYLEGSALSYGYA 833 Query: 1400 IT-AHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAIN 1458 T + A G + T + A E+ Y + + + + ++TDN++ + Sbjct: 834 NTLNNAAHGKTTTLV-------EMQSYTASKETLYELMQQGSKQLHIFTDNQEKLEARME 886 Query: 1459 NAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQA 1504 + + ++ + + A +A+L Q Sbjct: 887 KSHIQPSSMARVMASTQSLDKYVNAQTAETLQSDVTMAVQALLDQQ 932 >UniRef50_D1RMM7 Conjugative transfer relaxase protein TraI n=2 Tax=Legionella RepID=D1RMM7_LEGLO Length = 1956 Score = 970 bits (2507), Expect = 0.0, Method: Composition-based stats. Identities = 394/1543 (25%), Positives = 684/1543 (44%), Gaps = 144/1543 (9%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLG----SMGERWAGRGAEQLGLQGSVDKDVFTRLL 56 M+++ ++ +A A +YYT +DNYY+ + RW G GA++L L G ++ F +LL Sbjct: 1 MLTLNKISAAKDAVHYYTTQDNYYLSDRDSLNSLSRWIGNGAQKLQLSGQIEPSQFLQLL 60 Query: 57 EGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQ 116 +G+LP G L + G +HRPG D+T SAPKSVS++A++G D+RL+ AH +AV + Sbjct: 61 DGQLPSGQLLGIIDKGERQHRPGTDVTLSAPKSVSILALVGQDERLVQAHQEAVTITFGR 120 Query: 117 VEALAS-TRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH-NGEWKT 174 +E LA+ R+ +G++ T NLV A+F H TSR+ +P LHTH + N+T+ +G W++ Sbjct: 121 IEQLAAEARITFNGETTFEKTRNLVAAMFVHTTSRELDPDLHTHLPILNMTERSDGLWRS 180 Query: 175 LSSDKVG-----KTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGV 229 LSS GF E +Y+NQ G +Y L ++V+ LGY+ + ++G +E+ G+ Sbjct: 181 LSSRAKNDKEHLDHGFRELIYSNQHYLGLVYMSSLAKKVKDLGYDIRIKDRYGNFEVVGI 240 Query: 230 PVEAF---SGRSQTIREAVGEDAS--LKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKET 284 EA S R I + + E + K+ + + L TR K +D ++ +W++ +KE Sbjct: 241 SDEAITATSKRRVQILDDMKERGTSSAKAAEKSNLSTRNPKMEIDSQVLHQQWVEEIKEL 300 Query: 285 GFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTV 344 G D+R + + + PD Q+AV A+A LSE Q + ++ + + Sbjct: 301 GIDLRGVIQESKLNIGRGAIKSTQITPLSPDAQKAVNDALAHLSEYSTQIQHGALVRQAM 360 Query: 345 GILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNR 404 E I+ +S E L E +T+ + E A N Sbjct: 361 -TFSAGLVEHEDIEREIESLLSVETLQGNPLE--YYTTASLLAREKDFIA-----KTTNE 412 Query: 405 VTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQ 464 + SVP S + ++ + I+ G ++E + ++V +A Sbjct: 413 LKASFSISVPNHGL----TSSVFKNNERIQIID-VAGFRCEKELIQDMVDLAEANQLNSY 467 Query: 465 IIAADRRSQMNMKQD-ERLSGELITGRRQLLE---------------------GMAFTPG 502 ++ ++ D + L I+ + L + Sbjct: 468 VLHPGSLKTQQLRADIKHLDTGFISRIKNLFKDDIVHTVSGFQYHYGKHIKASPFTKKKQ 527 Query: 503 STVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRT---GTGSALMAMKDAGVNTYR 559 VIV +KLS + L D ++++ ++ T G+ + +K+ GV++Y+ Sbjct: 528 DLVIVHDAQKLSFDDLSALSDMTQASQSKLILLNNSAGTLGFSAGNPIKVLKEQGVHSYQ 587 Query: 560 WQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELK 619 + +S + + + A + + ++S +++ +T+ IR L Sbjct: 588 SLTTPIKGELKLSVG-KQINKSMSAAWLQLTPEQQQKSALVALNSKQKEAITRQIREGLV 646 Query: 620 TQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSH 679 QG L + L+ V L + Y+ G + +N E R Y + V S Sbjct: 647 QQGQLSRQMKKVAVLATVSLTQTEKGYAHSYKTGDNITFYN-EGRIPKHYKVCEV--DSK 703 Query: 680 SLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDR--LQV 737 L L +AQG+T + + + + R + + +A GERL + RV + V Sbjct: 704 GLHLENAQGKTSLFAYET-KEDFRVSREKILEIAVGERLINEQSLYHQRVKYAPKSSFVV 762 Query: 738 ASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAM 797 + V+E+ + V R E TL +++ + + + + P D+ V + + Sbjct: 763 SKVTEEGIYV----RHESNTLFLTNKVLSEHHFDYDYCKKPHEIKPDTNQVLVAAKPYQL 818 Query: 798 DNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLET------ 851 + + + + + V L++ DE + L R EQ+K A E + Sbjct: 819 NRNLIGEIGENAQHVLLFT-EDEPKAQRFLER--------EQLKWTAYEVQQKKPDLVYR 869 Query: 852 AISHQKSALHTPAQQAIHL------------------ALPVVESKKLAFSMVDLLTEAKS 893 I++ AL IH AL + AF DL+T A Sbjct: 870 DIAYANKALAREINSLIHHLELKSEDKKGIAATALTYALAKCTERNAAFKHSDLITHALM 929 Query: 894 FAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEA 953 A F ++ + A++ L+Y+D ++ + E++IL+ + + Sbjct: 930 HALGEADFEDIAPLLKARMAD-SLVYLDT-------YWTTKEALHIEEAILKANYQEQNT 981 Query: 954 VMPLMERVPG--ELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNM 1011 V P+ V L E LT GQ+ A +++ TSDRF +QG AGVGKTT R V Sbjct: 982 VQPIEPSVQKLLSLPETLTQGQKDAITLVVSTSDRFVSIQGLAGVGKTTMMRHVKD---- 1037 Query: 1012 LPESERPRVVGLGPTHRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDE 1071 + +S + +V+GL PTH+AV E+ G+ AQT+ SFL + + +N L ++DE Sbjct: 1038 IAQSNQFQVLGLAPTHKAVEELNVNGIQAQTVDSFLRN--------DGGLGANHLVIVDE 1089 Query: 1072 SSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVR 1131 SSM+ N R V +GD QLQ++A G P L + A M EIVR Sbjct: 1090 SSMIDNEKYHALQQKCIDTQSRMVFTGDITQLQSLASGIPHELTIKSQSQKTAFMTEIVR 1149 Query: 1132 Q--TPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAE 1189 Q PEL++A R++ +AL ++++ P + +++ P H ++ S E K + Sbjct: 1150 QNPNPELKKAAEFASRREIGKALELIKNIDPEEYVQRK---TPIHGLS-HSSLVEIKCMD 1205 Query: 1190 AQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVRE 1249 + K K ++Y I D+ RTPE ++ TLIV H +EDR + ++ D Sbjct: 1206 EEGKKDYK---------SIYRTIADDFLSRTPECQKNTLIVAHAHEDRTPIEVLLRDGLR 1256 Query: 1250 KAGELGKEQVMVPVLNTANIRDGELRRLSTWET------HRDALVLVDNVYHRIAGISKD 1303 K +L + V+ L ++ + + ++E ++ V + Y + I ++ Sbjct: 1257 KQHQLHNQDVLCKRLFPVSLDQADQVKAHSFEPGDVIRFGKNYSVAKKDEYFTVKSIDRE 1316 Query: 1304 DGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWT 1363 + D IS + Y + +GDR+R ++D RG +AN +T Sbjct: 1317 ANKLFCVDESQVAFAISASILPKTMPSFYKLHERPLASGDRIRLKRNDDARGIIANEEYT 1376 Query: 1364 VTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNR 1423 VT V G+SV LS+ + + +EQA+ H D AY TA+ +QGA+ F IALE NR Sbjct: 1377 VTQVFGESVGLSNHKNQVTLNL-KEQADLHWDYAYTNTAYSSQGATSKFMIALE--LENR 1433 Query: 1424 KLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTA 1466 ++ S + +R YTDN +G + + + +++ A Sbjct: 1434 LVVTTHRSHEIDATRASHQATFYTDNIEGLVNRLEDPLKQRDA 1476 Score = 96.5 bits (238), Expect = 1e-17, Method: Composition-based stats. Identities = 57/323 (17%), Positives = 133/323 (41%), Gaps = 26/323 (8%) Query: 1182 SQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLN 1241 ++ + +KGE V + +++ + TPE ++++ +V ++ + + Sbjct: 579 KEQGVHSYQSLTTPIKGELKLSVGKQINKSMSAAWLQLTPEQQQKSALVALNSKQKEAIT 638 Query: 1242 SMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDN---VYHRIA 1298 I + + G+L ++ V VL T ++ E +++T + + ++++ Sbjct: 639 RQIREGLVQQGQLSRQMKKVAVLATVSLTQTEKGYAHSYKTGDNITFYNEGRIPKHYKVC 698 Query: 1299 GISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVA 1358 + + L++A+G T L + E + + + G+R+ + V Sbjct: 699 EVDSKG--LHLENAQGKTSLFAY--ETKEDFRVSREKILEIAVGERL-INEQSLYHQRVK 753 Query: 1359 ---NSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIA 1415 S + V+ V+ + + + T + + +E H D Y H + + +A Sbjct: 754 YAPKSSFVVSKVTEEGIYVRHESNTLFL-TNKVLSEHHFDYDYCKKPHEIKPDTNQVLVA 812 Query: 1416 LEGTEGNRKLMAGF-ESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKP 1474 + + NR L+ E+A QHV ++T++ + K TA++V + KP Sbjct: 813 AKPYQLNRNLIGEIGENA--------QHVLLFTEDEPKAQRFLEREQLKWTAYEVQQKKP 864 Query: 1475 D---REVMNAERLFSTARELRDV 1494 D R++ A + + ARE+ + Sbjct: 865 DLVYRDIAYANK--ALAREINSL 885 >UniRef50_A9L6G5 Conjugative transfer relaxase protein TraI n=7 Tax=Gammaproteobacteria RepID=A9L6G5_SHEB9 Length = 1986 Score = 961 bits (2484), Expect = 0.0, Method: Composition-based stats. Identities = 416/1650 (25%), Positives = 712/1650 (43%), Gaps = 148/1650 (8%) Query: 1 MMSIAQV-RSAGSAGNYYTDKD---------------------NYYVLGSMGE---RWAG 35 M+SI+ + SAG A +YY ++ NYY+ E +W G Sbjct: 1 MLSISPIASSAGGAASYYLSEEKNLNLPDVSLEKAADAKEGETNYYLKEQSAEPNTQWFG 60 Query: 36 RGAEQLGLQG-SVDKDVFTRLLEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMA 94 + AEQ G+ G V++ +L G L D ++ ++ R G+D TFSAPKSVS++A Sbjct: 61 KLAEQEGMLGKPVEEHQLKEVLAGSLND----QTLKTQNSNARNGFDFTFSAPKSVSLLA 116 Query: 95 MLGGDKRLIDAHNQAVDFAVRQVEALASTRVMTD---GQSETVLTGNLVMALFNHDTSRD 151 ++GGDKRL+ AH+ AV FA+ +E A+ T+ + TGNL+ A+ H TSR+ Sbjct: 117 LVGGDKRLMTAHDDAVKFALSHIEKDAAQARQTNPDTKATSFENTGNLLFAMVRHKTSRE 176 Query: 152 QEPQLHTHAVVANVTQH-NGEWKTLSSDKVGKTGFI----ENVYANQIAFGRLYREKLKE 206 ++PQLHTH++ AN+T+ G + L+S K G I E VY +Q + LY+ L Sbjct: 177 EDPQLHTHSLTANMTKDSEGTLRALASSFKQKGGIINGTGERVYNHQKYYTSLYQSALAR 236 Query: 207 QVEALGYETEVVGKHGMWEMPGVP---VEAFSGRSQTIREA---VGEDASLKSRDVAALD 260 VE GY+T +G + ++E+ GVP ++ FS RSQ I E +G D S +RDVAA D Sbjct: 237 SVEQAGYQTRSLGNN-LFEVEGVPQSLLDTFSTRSQQINEQTQSLGLD-SQAARDVAAKD 294 Query: 261 TRKSKQHVDPEIKMAEWMQTLKETGFDIRAYR-DAADQRADLRTLTPGPASQDGPDVQQA 319 TRKSK + +W +GF++ ++ D+ + L L PA+ D A Sbjct: 295 TRKSKAYTSEATLFEQWKNKANNSGFNLTSFVTDSMSRETSLNALALKPAAID------A 348 Query: 320 VTQAIAGLSERKVQFTYTDVLART-VGILPPENGVIERARAGIDEAISREQLIPLDREKG 378 V++AI S + +F Y ++ + + + +D+ I LIPLD+E Sbjct: 349 VSRAIEHASNTQNRFNYAKLVESATLEFTRGQKLDALDIKLALDKHIEDGALIPLDKESA 408 Query: 379 LFTSGIHVLDELSVRALSRDIMKQNRVTV--HPEKSVPRTAGYSDAVSVLAQDRPSLAIV 436 FTS H+ E ++ + R V + + A VS L + +V Sbjct: 409 TFTSAAHIKAETNLLESIKPKTANMRQVVDTNTLQGKGLNADNQKKVSELFASTKQVNLV 468 Query: 437 SGQGGAAGQRERVAE-LVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLE 495 + G E++A L+ + G+ + II D +S+ ++ ER+ + T + ++ Sbjct: 469 N----VFGSSEQLATALLNVGEANGKRIHIITPDMKSK--LQTSERVQRDSSTVVKWIMN 522 Query: 496 GMAFTPGSTV---------------IVDQGEKLSLKETLTLLDGAARHNVQVLITDS--- 537 T+ +V+ KL L + LL A N +V++ + Sbjct: 523 HFKPDHTHTLSSFTKTANNTNRDILVVENANKLGLNDFNALLAQAKAGNSKVILLNHANA 582 Query: 538 GQRTGTGSALMAMKDAGVNTYRWQGGEQRPATI-ISEPDRNVRYARLAGDFAASVKAGEE 596 Q G+A+ +K VN W +Q + + E + R +A +A + Sbjct: 583 KQGMKAGNAIEVLKKGNVNESNWVATKQSNTAMRLHESKDSDRVNLIAKTYAQLPEKQHT 642 Query: 597 SVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVM 656 V ++ L AIR+EL+ QG + + + L+PV+L ++ R + Y GMV+ Sbjct: 643 QV-IAGTHKDVKQLNSAIRAELQNQGDVSRLGLNIPTLNPVFLSAQQREVVGQYTKGMVL 701 Query: 657 EQWNP--ETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLF---RPEKMP 711 QW + +D V +++LTL D G+ + SS + + +P+ + Sbjct: 702 TQWQKVGGRNQQQQLTVDSVNRDNNTLTLIDKNGKASEINPSSKAFKAAEYVIAKPDNLH 761 Query: 712 VADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLE 771 +A+G++L + +S + ++S++ +T+ + ++ S L Sbjct: 762 IANGDKLIMATNHQDSGLS-KQIYTINALSKEWVTL-KDESGKQHSVKAS--ALHHAPLN 817 Query: 772 NGWVETPGHSVSDSATVFASVTQMAMDNATLNG-LARSGRDVRLYSSLDETRTAEKLARH 830 +G+ TP ++ +++ ++ + L+ L + + + +++ + ++L + Sbjct: 818 HGYATTPSNASPNASHHIVNIKAYSASKEWLHDTLTQGIKHIDIFTD-KAQQFDDRLEKS 876 Query: 831 PSFTVVSEQIKTRAGETSLETAISHQKSALHTP------------------AQQAIHLAL 872 +I A E ++ Q +AL T A+ A+ Sbjct: 877 EVKPSSISRIMQAADMP--EKFVNSQTTALLTQDVTAALNAIGAQHQDKGLIHNAVDFAI 934 Query: 873 PVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVD------VAKGY 926 + K+ +S +L+ A +A E G + EI ++ D ++ Y Sbjct: 935 QHISEKEAGYSQKELIVNAIKYAFEEKGTSITQHEIINTLQHMATNSTDKGAPSLLSAEY 994 Query: 927 GTG-LLVSRASYEAEKSILRHILEGKEAVMPLMERVPG----ELMEKLTSGQRAATRMIL 981 G ++A+ + E IL + GK+ + PL + LT GQ+ AT +I Sbjct: 995 HDGTRWTTQAAIDTEVRILDRLQAGKDQLAPLTSVEHATQVLSQNQSLTDGQKDATLLIT 1054 Query: 982 ETSDRFTVVQGYAGVGKTTQFRAVMSAVNM-------LPESERPRVVGLGPTHRAVGEMR 1034 T DRF VQG AG GK+T + V P+ + +GL PTH AV E++ Sbjct: 1055 TTKDRFVGVQGLAGTGKSTMLETGIDLVKQSESILNTQPDKTPTQFIGLAPTHAAVNELK 1114 Query: 1035 SAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRA 1094 V++QT+ S L + Q + ++NT+FLLDESSM N M + LI G RA Sbjct: 1115 DKNVESQTVQSLLSNFLSQDAKPDQ--YANTVFLLDESSMTSNAQMDKFTHLIETTGARA 1172 Query: 1095 VASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQ-TPELREAVYSLINRDVERALS 1153 V GDT QL + G+PF L + A + MK+IVRQ L AV+++++R E A+ Sbjct: 1173 VFLGDTKQLTSQEAGKPFELALNKGAINSVTMKDIVRQQNSTLLSAVHNIVDRQGESAID 1232 Query: 1154 GLESVKPSQ---VPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYE 1210 ++ P P A PE T + ++ Q + L Sbjct: 1233 KIQQQLPFDQYTAPTANDAVTPEKQATANINQSLNIISTLQLITDNPKKNQQLATEALPA 1292 Query: 1211 AIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIR 1270 + +Y RTP+ARE TLI+ + N++R + I ++ L EQ VP L + Sbjct: 1293 TVALEYLARTPKARENTLIIAYTNKERDDITHEIRQGLQQQKSLSTEQFTVPRLRGVHAS 1352 Query: 1271 DGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQD-AEGNTRLISPREAVAEGV 1329 EL + ++ L + Y I + K + ++TL D G + P+ + Sbjct: 1353 KAELATMLPYQQGL-ILTTGKDSYFEIMKVDKLNNMLTLADMKTGEEKHFFPKNHGHKFT 1411 Query: 1330 TLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQ 1389 L+ + GD + KSD +R N +TV+++ + L ++ Sbjct: 1412 NLWAKSEQPLAEGDSIMLRKSDIDREMQGNKTYTVSSIDDKQMQLKSTDNHTLTLSTKDL 1471 Query: 1390 AEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDN 1449 + H D AY TA AQGA+ I +G + AY+ ++R +HV++ TDN Sbjct: 1472 KDAHWDYAYTRTADMAQGATYENVITAIKGQGA---LTNVRRAYIDITRASKHVKIITDN 1528 Query: 1450 RQG-WTDAINNAVQKGTAHDVFEP-KPDREVMNAERLFSTARELRDVAAGRAVLRQAGLA 1507 Q +NN K +A + + P+ + ++ G L+ L Sbjct: 1529 PQKMMLSWVNNDPNKVSALETRDKYYPEHTPLFNDKPLPQENPKYLDVNGYVDLK---LM 1585 Query: 1508 GGDSPARFIAPGRKYPQPYVALPAFDRNGK 1537 + A+ A + P D++ K Sbjct: 1586 ATELNAKLPAYSESLATQLLGEPNHDKSDK 1615 >UniRef50_C9NPT5 Putative conjugative transfer protein TraI n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NPT5_9VIBR Length = 1685 Score = 933 bits (2411), Expect = 0.0, Method: Composition-based stats. Identities = 430/1742 (24%), Positives = 712/1742 (40%), Gaps = 154/1742 (8%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGL-QGSVDKDVFTRLLEGR 59 M+++ + SA A YY + + W G+ A++ GL + V+ F L G Sbjct: 1 MLTLIPLSSAARAAQYYLVDEQEKTGQARAGYWLGKLAKEAGLWRQKVEPKCFLEALRGH 60 Query: 60 LPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEA 119 + A + R ++H PG D+TFSAPKS+S++A+LGGD+RL AH AV +A+ +E Sbjct: 61 VQGEATVGR----RSQHAPGLDVTFSAPKSLSLLALLGGDQRLRQAHEHAVHYALTALER 116 Query: 120 LA-STRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ-HNGEWKTLSS 177 A RV + GQ V TG+L++A+F H TSR +PQLH+HAV+ N+T+ G + L+S Sbjct: 117 EAAQARVQSQGQLAYVETGSLLVAVFEHTTSRAHDPQLHSHAVITNLTRVAQGPLRALAS 176 Query: 178 DKVGKT----GFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP--- 230 ++ G E ++A+Q + LY L + V ALGY E +G +++ GVP Sbjct: 177 CTRQRSSVLNGTFERLFAHQKYYSALYHGHLAKSVTALGYRLEPQA-NGAFDIVGVPRSV 235 Query: 231 VEAFSGRSQTIREAVGEDA--SLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDI 288 +EAFS R I++ S +RD+AAL TR K + EW L G+ Sbjct: 236 IEAFSVRRAQIQQWQRARGWDSPSARDIAALCTRVEKATEHSVNPLPEWQSRLVALGYTP 295 Query: 289 RAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILP 348 DAA + P + +AVT AI L+ + + ++ Sbjct: 296 EQLLDAARRGP------PRVPLPMINEANRAVTLAIDHLTRYQTAMSMEHIVQVAFDRFN 349 Query: 349 PENG-VIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTV 407 + ++ + +++ I +QLI L +G +T+ + ELS+ A +R K Sbjct: 350 DQPSLTVQAVKNAVEQRIKDKQLIALP-TQGHYTTAELLHRELSLLACARRRHKVPGQRP 408 Query: 408 HPE--KSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQI 465 HP +S +A ++ L + ++ QG + V + R G + Sbjct: 409 HPHLLESRHLSAAQRMCLTTLIRSTRPFHVIDVQGEPGALNDHV---LDALRISGLGSHV 465 Query: 466 IAADRR-----------SQMNMKQDERLSGELITGRRQLLE-GMAFTPGSTVIVDQGEKL 513 + + RR + + + +RLS T Q L G V+VD +L Sbjct: 466 VFSRRRDIRQWWTRHSAAPRSRQWLQRLSSITPTILHQFLAAPPPLRRGEVVVVDDARQL 525 Query: 514 SLKETLTLLDGAARHNVQVLITDSGQRTGTG---SALMAMKDAGVNTYRWQGGEQRPATI 570 + ++ L D + ++++ + R + +AL + V+TY WQ EQRP+ + Sbjct: 526 NAEQLRQLCDIVTQSQNKLILLNRHTRQPSAWARNALALFRCGHVSTYVWQSQEQRPSKV 585 Query: 571 I--SEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPE 628 + E DR++ L A++ E + + R A LT +R L+ G L P Sbjct: 586 VLTGEEDRSLTSRLL----DAALDPRWE--IRTASRRTHADLTHRVRELLRVHGHLSGPS 639 Query: 629 VTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYV---IDRVTAQSHSLTLRD 685 V++ A WL + L Y+PGM + R DR+V + V Q + + L Sbjct: 640 VSLLADVCQWLSPSEQRLTKYYQPGMRLRY-----RYRDRWVQGHVHTVDRQRNCIELMT 694 Query: 686 AQGETQV-VRISSLDSSWS--LFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSE 742 +G+ V + ++S +S S ++ + +A GERL T P + + G +V S Sbjct: 695 DKGKVPVRLDLTSEAASLSAQVWVSHPLNIAKGERLIATQNEPNIGLEEGLAYRVVKCSP 754 Query: 743 DAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATL 802 TV V + +SD ++ L ++ P +F + + L Sbjct: 755 ---TVCVLKGPDGGVHRLSDLTRSSWPLAYHYLAGPSDRHPKPYLLFVA-PAYTLSKTLL 810 Query: 803 NGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQ----------IKTRAGETSLETA 852 L R + L++ D ++L E+ R T +E Sbjct: 811 EPLCARYRRIDLHTD-DRPLAHQRLEHADVRPCAIERLLSPHPTIDRYLDRTAATDIERD 869 Query: 853 ISHQKSALH-----TPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAA----EGTGFTE 903 + + + A+QA+ AL + + AF L+ E+ FA EG + Sbjct: 870 VKQALHLVAPLANASVAKQAVAFALHHCATTQAAFRQRTLVIESIRFALAESREGLTLND 929 Query: 904 LGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPG 963 + E++ Q + D + + E++IL H+ ++ PL Sbjct: 930 ILAELDGQRTLLSRAFQDGT------RWTTDRALAQERAILSHLHTQRDTQPPLTPPSAL 983 Query: 964 ELME----KLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESER-- 1017 E + +LT GQR A +I + DRF VQG AG GK+T + V+ V Sbjct: 984 ETLLSTRPQLTPGQRQALSLITTSRDRFVAVQGLAGTGKSTLLKEVLQLVREAQSDIARP 1043 Query: 1018 -PRVVGLGPTHRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVG 1076 +++GL PT AV E++ G+ A TLA L + Q R + F +LF LDE +M+G Sbjct: 1044 PKQLLGLAPTRSAVRELKRQGLPATTLAQCL--ARYQDRRTSSATFCRSLFFLDECAMLG 1101 Query: 1077 NTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQ-TPE 1135 N + R L+ RAV GD QL A+ G+PF L R A + +IVRQ TP Sbjct: 1102 NPQLLRFLRLVIDSNSRAVLLGDRHQLLALEAGKPFALAIERGWIKTAYLHDIVRQRTPN 1161 Query: 1136 LREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAM 1195 LR AV ++ A+ L AP+H+ + L ++ KA Sbjct: 1162 LRRAVQHFVDGQPGSAIHCLSKQ------------APDHATRAPTIVSTHDLMPSEDKAN 1209 Query: 1196 LKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELG 1255 +LY+ +V D+ RTP+ R QTLI+ H + +R + +++ R + GEL Sbjct: 1210 ----------PSLYQQLVDDFLSRTPDTRRQTLIIAHTHVERDAIATVMRAARRERGELP 1259 Query: 1256 KEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGN 1315 V P L N E + ++ R L L N Y IA + G++TL + + Sbjct: 1260 DRSVPTPRLRAINTTPAERGTMMPYQPGR-VLSLHPNHYETIAEVDPTTGIVTLASSTPD 1318 Query: 1316 T-RLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTL 1374 R++ P E LYT + D + F ++ R + +N + V +S + L Sbjct: 1319 APRVVLPLERDHTHTQLYTLSHPSLSVNDWIVFRQATRGDPWCSNERYVVERISTTGIQL 1378 Query: 1375 SDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYV 1434 + R E A+ H D Y TA AQG + +++ ++G + AYV Sbjct: 1379 RSERGQRVAFNPFELAQAHWDYDYTRTADMAQGMTVDCVLSVVRSQGA---LTSLRRAYV 1435 Query: 1435 ALSRMKQHVQVYTDNRQGWTD-AINNAVQKGTAHDVFEPK-PDREVMNAERLFSTARELR 1492 +SR + V +YTD + + ++ + +A D + P R V E+ Sbjct: 1436 DVSRARDRVCLYTDAPEALVNTWLSRPCEAFSALDTIDGTIPARTVYFNEQPNLADDPRF 1495 Query: 1493 DVAAGRAVLRQAGLAGGDSPARFIAPGRKY----PQPYVALPAFDRNGKSAGIWLNPLTT 1548 A G +R+ + R+ P P + P + G L ++ Sbjct: 1496 HTALGEYDVRRLEAHLNHALPRYTESLATQLFGCPDPERSTPQWLVFGPRDRPTLVCVS- 1554 Query: 1549 DDGNGLRGFSGEGRVKGSGDAQFVALQGSRNGESLLADNMQDGV-----RIARDNPDS-G 1602 RG + + + Q +R +M D +P+ Sbjct: 1555 ---GPKRGHITDTQTGRTHSLLSTLAQRARLPHDAFLAHMHDTFCRGLPPTITAHPNHDA 1611 Query: 1603 VVVRIAGEGRPWNPGAITGGRVWGDIPDNSVQPGAGNGEPVTAEVLAQRQAEEAIRRETE 1662 + + A W P +V+P E R I R+T Sbjct: 1612 YIKQPAPAWPRWTPS-------LPAQTSEAVEPHDPWWECWAPVPTVDRDLLHDIDRDTL 1664 Query: 1663 RR 1664 +R Sbjct: 1665 QR 1666 >UniRef50_B0RKM2 Mobilization protein TraI n=3 Tax=Yersinia RepID=B0RKM2_YEREN Length = 1656 Score = 644 bits (1662), Expect = 0.0, Method: Composition-based stats. Identities = 312/1639 (19%), Positives = 565/1639 (34%), Gaps = 229/1639 (13%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVL--GSMGERWAGRGAEQLGLQGSVDKDVFTRLLEG 58 M+S+ ++ + AGNYY D+YY G + W G+GAE+LGL G+VD D F LLEG Sbjct: 1 MLSLKKIGNVKEAGNYYLSHDSYYNKDTGEVHSEWGGKGAEELGLSGAVDTDRFIELLEG 60 Query: 59 RLPDGADLSRMQ-DGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQV 117 ++ L R + +G H PG+D TFSAPK S++A++G DKRLI AH ++V A++ + Sbjct: 61 KIKADIQLGRTKVNGDLEHVPGWDFTFSAPKGASILALVGDDKRLIQAHQESVIEAMKFL 120 Query: 118 EA-LASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH-NGEWKTL 175 E A+TR DG++ NL+ A F H SR +PQLHTH V N G+WK+L Sbjct: 121 EKNYAATRTYKDGKTHLEKVDNLLYASFIHTESRSHDPQLHTHNPVINAVLDSEGKWKSL 180 Query: 176 SSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKH-GMWEMPGVP---V 231 +Y ++ G +YR + LGYE EV + G +++ G+P Sbjct: 181 EP---------VEMYRAKMMAGLVYRSSYASKARGLGYEIEVTDREKGFFDIKGIPDPLK 231 Query: 232 EAFSGRSQTIREAVGEDASLKSR--DVAALDTRKSKQHV--------------------- 268 +FS R Q I+ A+ + + + A L TR K + Sbjct: 232 GSFSKRRQQIQAAINQRGLFDQKSIEKATLFTRDKKTSIAQEERNEIWKTTVTESGFDID 291 Query: 269 ----DPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQA----- 319 + + + + + D A + T + + Sbjct: 292 LFISNAKEQQIQQQNRGERDIHDNNGIESPAPESKTESTSKTKERPEAKESFYENHKEQS 351 Query: 320 ------------------------------------VTQAIAGLSERKVQFTYTDVLART 343 V A L+E + F+Y +L Sbjct: 352 EAFAEKGDTTDFLSQQEHIHLEESRHFDYDSQSLNDVRLAYKVLAENESVFSYKALLKEA 411 Query: 344 VG-ILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDE-------LSVRAL 395 + L EN ID I +LIP K FT+ + E L+ + Sbjct: 412 MKLRLGLENSSKADIDLDIDRLIDVGELIP---RKTGFTTKEALSRERFIVTTMLNGKDT 468 Query: 396 SRDIMKQNRVTVHPEKSVPRTA-----------GYSDAVSVLAQDRPSLAIVSGQGGAAG 444 + I V H + R A+ + + ++ + G G G Sbjct: 469 YQAIGDLKGVKTHIDAFEQRQTELLGQKFTFSDDQRQAIQDMLLSKDLVSGIQGYAG-TG 527 Query: 445 QRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGST 504 + ++ ++ A QG ++ +A + + +D + + + Sbjct: 528 KTTLLSCVIEYATNQGYIIKGLAPTGSAVETLHKDTGIVTSTVDSYLFTRKPEDIESKQI 587 Query: 505 VIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTG---TGSALMAMKD-----AGVN 556 ++VD+G L+ K LL A ++ + + G + M+ A V Sbjct: 588 ILVDEGSLLNAKHVQDLLIAAKNSGAKLFLLGDKDQHAAVEAGKPFIIMQAFGMQVASVK 647 Query: 557 TYRWQGGEQRPATIIS-----------------EPDRNVRYARLAGDFAASVKAGEESVA 599 T Q E+ + + D N + + + +++ Sbjct: 648 TIIRQKNEELLNAVKDAINNNFSESLNWMGKNVDVDENPLGKMATEWLSLTSEERGKTLV 707 Query: 600 QVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVME-Q 658 + + + IR EL+ +GV+ E++ L ++ Y+ ++E Q Sbjct: 708 IIPENKTRRKYNSTIRRELQEEGVVSKDEISTRVLLNSRMNHAKMRDTRYYKTEHLIEFQ 767 Query: 659 WNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDS----SWSLFRPEKMPVAD 714 + Y I + LT+ + V R LD +F E + ++ Sbjct: 768 KETQGIKPGFYKITLFNHLDNELTISSDNKDVHVFRPGELDEKDRYQLDVFEEENLKISK 827 Query: 715 GERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGW 774 G++L+ T GL + GD L+V S T + + + + Sbjct: 828 GDKLQWTKSRKGLGLKNGDMLEVISTDSSKGTYQAIRENDGQIFELDANQRLNVDYSYSL 887 Query: 775 VETPGHSVSDS---ATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHP 831 + A + AS ++ + + ++R+ ++++ + Sbjct: 888 TSYKAQGKTCDRVYALLVASKNKLVNNKSFYVSISRAKHIAKIFTDNKAKLLDAINKKDS 947 Query: 832 SFTVVSEQIKT--RAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLT 889 T E T E + E I LH + + A + +K+ FS DLL Sbjct: 948 DKTTALEGFSTGQMKREANDEKNIPKDNRKLHQAIME-VKTASEKLSAKQAVFSHTDLLK 1006 Query: 890 EAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAK--GYGTGLLVSRASYEAEKSILRHI 947 EA + ++ I + G+L + K SR + E+ ++ H+ Sbjct: 1007 EAMKWTLGIYDANDISDAIAHLRQEGNLALSSIQKKGEGSEHYYTSRNNVLIERELVVHL 1066 Query: 948 LEGKEAVMPLM-------------ERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYA 994 +GK + L ER E + + A I + D +V G Sbjct: 1067 QQGKGRLAKLAPKGVIKSYVDSRNERALSEDIMPINESSLFALETIFNSKDEGILVLGSD 1126 Query: 995 GVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVD-AQTLASFLHDTQLQ 1053 G R V + E + +V + V +M+ G+ A ++ S + + Sbjct: 1127 NTGHKNLLRTVG---KSIAEHQEYKVHAFSTNNTGVKQMKDDGMKNAMSIFSHMDRIEAS 1183 Query: 1054 QRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFR 1113 GE L+ ++ S +G + R L G R + D ++ A++ G Sbjct: 1184 IAKGEPLKGRRQLWYVENISTLGAEETLRLQRLARFSGARLIMVADKNEN-ALSWGAVPA 1242 Query: 1114 LQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPE 1173 L V ++ PE+ +A +L+ +E +LS L Sbjct: 1243 LLNHHGMHTVNFNATVMAHNPEINKASDALVKGRIEESLSAL------------------ 1284 Query: 1174 HSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHL 1233 + + + + + + Y + E R QT I+ Sbjct: 1285 ----------------SPMVHEVDSQIKAEAKIARIGVVKDTYLNLSTEERAQTAIILPD 1328 Query: 1234 NEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETH------RDAL 1287 + R +NSMI + + L V + E + ++ Sbjct: 1329 HHTRHAVNSMIREGLKAEKSLAYNGTETTVYRQVTLDPFEKKEARFYKVGMVLESESTTQ 1388 Query: 1288 VLVDNVYHRIAGISKDDGLITLQD-AEGNTRLI---SPREAVAEGVTLYTPDTIRVGTGD 1343 I + K + ++ ++ AEG I + G Y + + G+ Sbjct: 1389 NGTKGDKFTIVDVDKKNNILEIKSLAEGKILSIKTKDIPTSKGNGFISYAVENREIVKGE 1448 Query: 1344 RMRFTK---------SDRERGYVANSVWTVTAVS----GDSVTLSDGQQTREIRPGQEQA 1390 R+R T+ +D+ N+ V ++ +TL++GQQ Q Sbjct: 1449 RIRLTRAFPLPKKKQTDKGGYLPKNTEAIVKDINVSTGDLILTLNNGQQITL----NAQQ 1504 Query: 1391 EQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNR 1450 +H + Y + Q + + E +K A + + LSR ++ V TDN+ Sbjct: 1505 WKHYEWGYTYNHY--QVKDSAYKQVITIMESWKKNFATQNALHNTLSRSTHNLIVITDNK 1562 Query: 1451 QGWTDAI-NNAVQKGTAHD 1468 + D + N + A D Sbjct: 1563 EKLFDTLRANTGFQKMALD 1581 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 153/746 (20%), Positives = 283/746 (37%), Gaps = 123/746 (16%) Query: 816 SSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQ--------- 866 + A+ + EQ + A + +S Q+ ++ Sbjct: 327 TESTSKTKERPEAKESFYENHKEQSEAFAEKGDTTDFLSQQEHIHLEESRHFDYDSQSLN 386 Query: 867 AIHLALPVVESKKLAFSMVDLLTEAKSF--AAEGTGFTELGGEINAQIKRGDLLYVDVAK 924 + LA V+ + FS LL EA E + ++ +I+ I G+L+ Sbjct: 387 DVRLAYKVLAENESVFSYKALLKEAMKLRLGLENSSKADIDLDIDRLIDVGELIPRKTG- 445 Query: 925 GYGTGLLVSRASYEAEKSILRHILEGKEAVMPL------------MERVPGELM---EKL 969 ++ + E+ I+ +L GK+ + E+ EL+ Sbjct: 446 ------FTTKEALSRERFIVTTMLNGKDTYQAIGDLKGVKTHIDAFEQRQTELLGQKFTF 499 Query: 970 TSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRA 1029 + QR A + +L + D + +QGYAG GKTT V+ ++ + GL PT A Sbjct: 500 SDDQRQAIQDMLLSKDLVSGIQGYAGTGKTTLLSCVIE----YATNQGYIIKGLAPTGSA 555 Query: 1030 VGEM-RSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIA 1088 V + + G+ T+ S+L + + S + L+DE S++ + Sbjct: 556 VETLHKDTGIVTSTVDSYLFTRKPED------IESKQIILVDEGSLLNAKHVQDLLIAAK 609 Query: 1089 AGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQT-PELREAVYSLINRD 1147 G + GD DQ A+ G+PF + Q VA +K I+RQ EL AV IN + Sbjct: 610 NSGAKLFLLGDKDQHAAVEAGKPFIIMQAF-GMQVASVKTIIRQKNEELLNAVKDAINNN 668 Query: 1148 VERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMT 1207 +L+ DV Sbjct: 669 FSESLN-------------------------------------------WMGKNVDVDEN 685 Query: 1208 LYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTA 1267 + ++ T E R +TL++ N+ RR NS I ++ G + K+++ VL + Sbjct: 686 PLGKMATEWLSLTSEERGKTLVIIPENKTRRKYNSTIRRELQEEGVVSKDEISTRVLLNS 745 Query: 1268 NIRDGELRRLSTWET-----HRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPR 1322 + ++R ++T + + +++I + D +T+ + + P Sbjct: 746 RMNHAKMRDTRYYKTEHLIEFQKETQGIKPGFYKITLFNHLDNELTISSDNKDVHVFRPG 805 Query: 1323 EAVAEG---VTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTL----S 1375 E + + ++ + +++ GD++++TKS + G + V + T Sbjct: 806 ELDEKDRYQLDVFEEENLKISKGDKLQWTKSRKGLGLKNGDMLEVISTDSSKGTYQAIRE 865 Query: 1376 DGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVA 1435 + Q E+ Q ++D +Y++T++ AQG + AL N+ + +S YV+ Sbjct: 866 NDGQIFELDANQRL---NVDYSYSLTSYKAQGKTCDRVYALLVASKNK--LVNNKSFYVS 920 Query: 1436 LSRMKQHVQVYTDNRQGWTDAINNAV-QKGTAHDVFE--------------PKPDREVMN 1480 +SR K +++TDN+ DAIN K TA + F PK +R++ Sbjct: 921 ISRAKHIAKIFTDNKAKLLDAINKKDSDKTTALEGFSTGQMKREANDEKNIPKDNRKLHQ 980 Query: 1481 AERLFSTARELRDVAAGRAVLRQAGL 1506 A TA E ++A +AV L Sbjct: 981 AIMEVKTASE--KLSAKQAVFSHTDL 1004 Score = 150 bits (378), Expect = 5e-34, Method: Composition-based stats. Identities = 98/721 (13%), Positives = 214/721 (29%), Gaps = 100/721 (13%) Query: 251 LKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPAS 310 +++ +A + T + +D K T E GF + A+ ++ P Sbjct: 922 SRAKHIAKIFTDNKAKLLDAINKKDSDKTTALE-GFSTGQMKREANDEKNI----PKDNR 976 Query: 311 QDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQL 370 + + + V A LS ++ F++TD+L + I + +E Sbjct: 977 KLHQAIME-VKTASEKLSAKQAVFSHTDLLKEAMK-WTLGIYDANDISDAI-AHLRQEGN 1033 Query: 371 IPL-------DREKGLFTSGIHVLDELSVRALSRDIMKQ----------------NRVTV 407 + L + + +TS +VL E + + + Sbjct: 1034 LALSSIQKKGEGSEHYYTSRNNVLIERELVVHLQQGKGRLAKLAPKGVIKSYVDSRNERA 1093 Query: 408 HPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIA 467 E +P A+ + + +V G + +A Q +V + Sbjct: 1094 LSEDIMPINESSLFALETIFNSKDEGILVLGSDNTGHKNLLRTVGKSIAEHQEYKVHAFS 1153 Query: 468 ADRRSQMNMKQDERLSGELITGRR------QLLEGMAFT-PGSTVIVDQGEKLSLKETLT 520 + M +D+ + + + +G V+ L +ETL Sbjct: 1154 TNNTGVKQM-KDDGMKNAMSIFSHMDRIEASIAKGEPLKGRRQLWYVENISTLGAEETLR 1212 Query: 521 LLDGAARHNVQVLITDSGQRTGT--GSALMAMKDAGVNTY-------------------- 558 L A ++++ G+ + G++T Sbjct: 1213 LQRLARFSGARLIMVADKNENALSWGAVPALLNHHGMHTVNFNATVMAHNPEINKASDAL 1272 Query: 559 ---RWQGGEQRPATIISEPDRNVRYAR-------LAGDFAASVKAGEESVAQVSG-VREQ 607 R + + ++ E D ++ + + A + + Sbjct: 1273 VKGRIEESLSALSPMVHEVDSQIKAEAKIARIGVVKDTYLNLSTEERAQTAIILPDHHTR 1332 Query: 608 AILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWN--PETRS 665 + IR LK + L T V LD + Y+ GMV+E + Sbjct: 1333 HAVNSMIREGLKAEKSLAYNGTETTVYRQVTLDPFEKKEARFYKVGMVLESESTTQNGTK 1392 Query: 666 HDRYVIDRVTAQSHSLTLRD-AQGETQVVR----ISSLDSSWSLFRPEKMPVADGERLRV 720 D++ I V +++ L ++ A+G+ ++ +S + + + E + GER+R+ Sbjct: 1393 GDKFTIVDVDKKNNILEIKSLAEGKILSIKTKDIPTSKGNGFISYAVENREIVKGERIRL 1452 Query: 721 TGK---------IPGLRVSGGDRLQVASVS-EDAMTVVVPGRAEPATLPVSDSPFTALKL 770 T G + V ++ ++ + TL Sbjct: 1453 TRAFPLPKKKQTDKGGYLPKNTEAIVKDINVSTGDLILTLNNGQQITLNAQQWKHYEWGY 1512 Query: 771 ENGWVETPGHSVSDSATVFASVTQ-MAMDNATLNGLARSGRDVRLYSSLDE---TRTAEK 826 + + T+ S + A NA N L+RS ++ + + E Sbjct: 1513 TYNHYQVKDSAYKQVITIMESWKKNFATQNALHNTLSRSTHNLIVITDNKEKLFDTLRAN 1572 Query: 827 LARHPSFTVVSEQIKTRAGETSLET-------AISHQKSALHTPAQQAIHLALPVVESKK 879 + T+A + + + + L +A+ + V K+ Sbjct: 1573 TGFQKMALDNKKVSVTQADIKNFDELWGKSLSPFEKRITRLELAVSKAVSKFVEVTAKKE 1632 Query: 880 L 880 + Sbjct: 1633 I 1633 >UniRef50_B2JAG8 ATP-dependent exoDNAse (Exonuclease V) alpha subunit-helicase superfamily I member-like protein n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2JAG8_NOSP7 Length = 2142 Score = 532 bits (1370), Expect = e-149, Method: Composition-based stats. Identities = 219/897 (24%), Positives = 368/897 (41%), Gaps = 90/897 (10%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVD-KDVFTRLLEGR 59 M++ A V S+ A NY+ NYY G W+G+GA +LGL G++D ++ F ++ GR Sbjct: 1 MLTAANV-SSEMAVNYFVK--NYYHQGK--SLWSGQGALKLGLSGAIDDEEAFKNVISGR 55 Query: 60 LPDGADLSRMQD-GSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVE 118 P G + + + R D TFSAPKSVS+MA++GGD RLIDAH+QA+ + +E Sbjct: 56 SPQGREQLNARALKPDERRAALDCTFSAPKSVSLMALVGGDTRLIDAHHQALKETLELIE 115 Query: 119 A-LASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ-HNGEWKTLS 176 A TRV + V TGNLV+A F+H SRD +P LHTH ++ N+TQ +G W +L Sbjct: 116 QRYAYTRVTDNSGRHRVKTGNLVVAQFDHIESRDLDPHLHTHCLLMNMTQTPDGRWLSLG 175 Query: 177 SDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGV---PVEA 233 ++ ++AN+ G Y+ L +V+ LGYE E KHG +++ G +EA Sbjct: 176 NN---------EIFANKKFLGMAYQSSLAREVQKLGYEIEKS-KHGQFDIKGFKFEDLEA 225 Query: 234 FSGRSQTIREAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRD 293 FS R Q I + +++ R+ +TR+ KQ + +A W + G + Sbjct: 226 FSKRRQQIIASFSANSTWAEREKIWDNTRQRKQKLPESELLAFWKEEAAALGI---RFVK 282 Query: 294 AADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGV 353 A + R ++ + + + AIA SER V F D+ + E + Sbjct: 283 AGEPRQEIPANE--------KSLAEVLDLAIAHCSERNVAFRQEDLEKFIL-----EERL 329 Query: 354 IERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIM-------KQNRVT 406 A ++LI L FT+ V EL+ L + ++ V Sbjct: 330 ATDIAATAALIREHQELIALPGLTDQFTTMTAVRRELATIDLMQQGQYKFCSISQREVVE 389 Query: 407 VHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQII 466 H E ++ T G AV + A G G AG+ + EL +A G ++ Sbjct: 390 SHLENTLLNT-GQRQAVELAATTSDQFIAWQGVAG-AGKTFALKELKAIAFNAGYTIKGF 447 Query: 467 AADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAA 526 A + + ++ + E I R + E P +VD+ LS K+ LL A Sbjct: 448 APSSSAAKVLSEELEIQSETI-ARLLVTEPKEIEPNQIWVVDEAGLLSAKDAHALLQRAT 506 Query: 527 RHNVQVLITDSGQRTG---TGSALMAMKDAGVNTYR-----WQGGEQRPATI-------- 570 +V++ ++ G+ +++ AG+ T Q Q + Sbjct: 507 LLQARVILVGDTRQLSAVEAGNPFKSLQQAGIKTAHLNESLRQKNPQLKLAVNLIADGRI 566 Query: 571 ------------ISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVR-EQAILTQAIRSE 617 I + D + ++A D+ ++G E+ LTQAIR + Sbjct: 567 EAGFERLEANGSILQVDSFSKIEQIANDYIVGTPEQRLKTLVLAGTNTERLALTQAIRDK 626 Query: 618 LKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSH--DRYVIDRVT 675 LK +G LG T+T L L + G V+ R + + V Sbjct: 627 LKGEGTLGETA-TITQLQTKNLTKVQMRFAHNFEIGDVIMPTRDYKRRGLSKGKLYEVVG 685 Query: 676 AQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRL 735 + LTLR G+ V + ++++ ++ +A G+RL+ L G Sbjct: 686 RTTDKLTLRSDDGQHLEVDTA---FDKAVYQRHQIEIAVGDRLQWKKNDRQLGRRNGQEF 742 Query: 736 QVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSA-TVFASVTQ 794 V + + + + L+ V T S +A V S Sbjct: 743 TVTGIDLNIVHIKYADERTERISLAQTQ-----NLDYALVSTTYSSQGKTADQVLISADF 797 Query: 795 MAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLET 851 + +R+ ++++Y+ D TR E + + E ++ + ++++E Sbjct: 798 TIGQESFYVAASRARHELKIYT-EDPTRLVELAQQSKAKDNALELLRKQIQKSTIEQ 853 Score = 381 bits (978), Expect = e-103, Method: Composition-based stats. Identities = 129/629 (20%), Positives = 234/629 (37%), Gaps = 87/629 (13%) Query: 865 QQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAK 924 + + LA+ + +AF DL + F E T++ + +L+ + Sbjct: 298 AEVLDLAIAHCSERNVAFRQEDL----EKFILEERLATDIAATAALIREHQELIALPGL- 352 Query: 925 GYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEK---LTSGQRAATRMIL 981 T + + E + + + +G+ + +R E + L +GQR A + Sbjct: 353 ---TDQFTTMTAVRRELATIDLMQQGQYKFCSISQREVVESHLENTLLNTGQRQAVELAA 409 Query: 982 ETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM-RSAGVDA 1040 TSD+F QG AG GKT + + + + + G P+ A + + + Sbjct: 410 TTSDQFIAWQGVAGAGKTFALKEL----KAIAFNAGYTIKGFAPSSSAAKVLSEELEIQS 465 Query: 1041 QTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDT 1100 +T+A L + N ++++DE+ ++ D R + GDT Sbjct: 466 ETIARLLVTEPKE-------IEPNQIWVVDEAGLLSAKDAHALLQRATLLQARVILVGDT 518 Query: 1101 DQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQT-PELREAVYSLINRDVERALSGLESVK 1159 QL A+ G PF+ Q + A + E +RQ P+L+ AV + + +E LE+ Sbjct: 519 RQLSAVEAGNPFKSLQQ-AGIKTAHLNESLRQKNPQLKLAVNLIADGRIEAGFERLEA-- 575 Query: 1160 PSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGR 1219 G + E I DY Sbjct: 576 -------------------------------------NGSILQVDSFSKIEQIANDYIVG 598 Query: 1220 TPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLST 1279 TPE R +TL++ N +R L I D + G LG E + L T N+ ++R Sbjct: 599 TPEQRLKTLVLAGTNTERLALTQAIRDKLKGEGTLG-ETATITQLQTKNLTKVQMRFAHN 657 Query: 1280 WETH------RDALV--LVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTL 1331 +E RD L + + G + D +TL+ +G + A + Sbjct: 658 FEIGDVIMPTRDYKRRGLSKGKLYEVVGRTTDK--LTLRSDDGQHLEVD----TAFDKAV 711 Query: 1332 YTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAE 1391 Y I + GDR+++ K+DR+ G +TVT + + V + + E Sbjct: 712 YQRHQIEIAVGDRLQWKKNDRQLGRRNGQEFTVTGIDLNIVHIKYADERTERI--SLAQT 769 Query: 1392 QHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQ 1451 Q++D A T + +QG + + G ES YVA SR + +++YT++ Sbjct: 770 QNLDYALVSTTYSSQGKTADQVLISAD------FTIGQESFYVAASRARHELKIYTEDPT 823 Query: 1452 GWTDAINNAVQKGTAHDVFEPKPDREVMN 1480 + + K A ++ + + + Sbjct: 824 RLVELAQQSKAKDNALELLRKQIQKSTIE 852 >UniRef50_B1X3A0 Putative TrwC/TraI protein n=2 Tax=Cyanothece RepID=B1X3A0_CYAA5 Length = 1264 Score = 530 bits (1364), Expect = e-148, Method: Composition-based stats. Identities = 222/927 (23%), Positives = 369/927 (39%), Gaps = 118/927 (12%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSV-DKDVFTRLLEGR 59 M++I V +A A Y+ YY G RW G GA L L G + + D + LL+G+ Sbjct: 1 MLTIKNV-NAELAKTYFEK--GYYEEG----RWFGEGAANLNLTGEIKNHDAYNNLLDGQ 53 Query: 60 LPDGAD-LSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVE 118 PDG L + N+HR D TF+APKSVS+ A++GGD+RLI+AH +AV+ + +E Sbjct: 54 SPDGNHCLMGRKIKGNQHRAAIDCTFNAPKSVSLQALVGGDERLIEAHRKAVNQTLALME 113 Query: 119 -ALASTRVMTDGQ-SETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ-HNGEWKTL 175 A +R++ GQ + V TG L +A F+H +R+ +P LHTH VV NVTQ +G+W++L Sbjct: 114 SRYAQSRILKKGQPRQVVQTGKLAVAQFDHIETRNLDPHLHTHCVVMNVTQRDDGQWRSL 173 Query: 176 SSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGV---PVE 232 +D +Y Q G +Y+ L ++ LGY+ E +HG +E+ G +E Sbjct: 174 HND---------AIYRQQKLLGMVYQHNLALELRKLGYQVEAK-QHGQFEIAGYEKKDLE 223 Query: 233 AFSGRSQTIREAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDI---- 288 FS R Q I GE+AS+ R++A +TR K+ V P +W + E G Sbjct: 224 FFSKRRQQILAEAGENASVVERNIAWGNTRVKKEVVSPSELKQKWQREASELGVKFVNPN 283 Query: 289 --------------------------------RAYRDAADQRADLRTLTPGPASQDGPDV 316 +D +A+ + SQ P Sbjct: 284 TGLDKKGEGLGEQREQREQRKQREQREQREQREQRSRGSDYQANQGNIDQNAISQPSPIK 343 Query: 317 QQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISRE-QLIPL-D 374 V AIA ER V F +V + P N +D+ I + QLI + D Sbjct: 344 ANIVNDAIAHCEERAVAFRLEEVEKFILLNGQPINI------KNLDKTIGQHSQLINVSD 397 Query: 375 REKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHP------EKSVPRTAGYSDAVSVLAQ 428 +T+ + EL+ L + + R + T G +A++ Sbjct: 398 NLNRRYTTEAALQRELATIRLMLEGKNKERPICSEAKINQGLAPISLTEGQQEAITTALS 457 Query: 429 DRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELIT 488 R ++ G G AG+ + ++++ G V+ A + + + + + + Sbjct: 458 SRDTVMAWQGVAG-AGKTYALNHFTTLSQKNGYSVKGFAPSAEAAKVLGFEVGIKADTVA 516 Query: 489 GRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTG---TGS 545 + P IVD+ LS K LL A N +VL+ ++ G+ Sbjct: 517 SLLYSKQAKQVEPNQIWIVDEAGLLSAKAAYELLKRAKAENARVLLVGDTRQLSAVEAGN 576 Query: 546 ALMAMKDAGVNTYRW-QGGEQR------------------------PATIISEPDRNVRY 580 +++ AG+ T R Q QR A + E + Sbjct: 577 PFKSLQAAGMTTARMNQSLRQRTPELQTAVDFISKGEIDAGFGILNQANCLIEVAEEEKI 636 Query: 581 ARLAGDFAASVKAGEESVAQVSGVR-EQAILTQAIRSELKTQGVLGLPEVTMTALSPVWL 639 ++ D+ +A E ++G E+ +TQ IR LK +G LG V +T L L Sbjct: 637 NQIVNDYLKIPEADREKTLILAGTNAERLAITQTIRQGLKEEGKLG-EGVKLTQLKSKDL 695 Query: 640 DSRSRYLRDMYRPGMVMEQ-WNPETRSHDR-YVIDRVTAQSHSLTLRDAQGETQVVRISS 697 G ++ +N + R + + + + SLTL+D+ G V Sbjct: 696 TRVQMRFTHHLEIGDLVSPAFNYKQRQLSKGELYEIIDKDVDSLTLKDSTGNRVKVDPLF 755 Query: 698 LDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPAT 757 + ++ ++ +A G+RL+ T G V ++ T+ + + Sbjct: 756 EKA---VYGSSEIEIAVGDRLKWTKNDRKQGRRNGQEFTVKAIEGTIATIEYKDGQQDSF 812 Query: 758 LPVSDSPFTALKLENGWVETPGHSVSDSA-TVFASVTQMAMDNATLNGLARSGRDVRLYS 816 L+ G V T S +A V S + ++R D++LY+ Sbjct: 813 NFSVPQ-----HLDYGLVSTTYSSQGKTADQVLISADYTVGKESFYVAVSRVKSDLKLYT 867 Query: 817 SLDETRTAEKLARHPSFTVVSEQIKTR 843 LD+ + + E ++ R Sbjct: 868 -LDKDNLLDLAKASRAKKNPLELLRAR 893 Score = 380 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 137/636 (21%), Positives = 229/636 (36%), Gaps = 85/636 (13%) Query: 854 SHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIK 913 + S ++ A+ E + +AF + ++ + L I Sbjct: 333 QNAISQPSPIKANIVNDAIAHCEERAVAFRLEEVEKFIL-LNGQPINIKNLDKTI----- 386 Query: 914 RGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERV---PGELMEKLT 970 G + + A+ + E + +R +LEGK P+ G LT Sbjct: 387 -GQHSQLINVSDNLNRRYTTEAALQRELATIRLMLEGKNKERPICSEAKINQGLAPISLT 445 Query: 971 SGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAV 1030 GQ+ A L + D QG AG GKT L + V G P+ A Sbjct: 446 EGQQEAITTALSSRDTVMAWQGVAGAGKTYALNHF----TTLSQKNGYSVKGFAPSAEAA 501 Query: 1031 GEMR-SAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAA 1089 + G+ A T+AS L+ Q +Q N ++++DE+ ++ A Sbjct: 502 KVLGFEVGIKADTVASLLYSKQAKQVE------PNQIWIVDEAGLLSAKAAYELLKRAKA 555 Query: 1090 GGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQ-TPELREAVYSLINRDV 1148 R + GDT QL A+ G PF+ Q + A M + +RQ TPEL+ AV + ++ Sbjct: 556 ENARVLLVGDTRQLSAVEAGNPFKSLQA-AGMTTARMNQSLRQRTPELQTAVDFISKGEI 614 Query: 1149 ERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTL 1208 + L +E Sbjct: 615 DAGFGILNQANCLIEVAEE---------------------------------------EK 635 Query: 1209 YEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTAN 1268 IV DY RE+TLI+ N +R + I ++ G+LG E V + L + + Sbjct: 636 INQIVNDYLKIPEADREKTLILAGTNAERLAITQTIRQGLKEEGKLG-EGVKLTQLKSKD 694 Query: 1269 IRDGELRRLSTWETHR--------DALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLIS 1320 + ++R E L + I I KD +TL+D+ GN + Sbjct: 695 LTRVQMRFTHHLEIGDLVSPAFNYKQRQLSKGELYEI--IDKDVDSLTLKDSTGNRVKVD 752 Query: 1321 PREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQT 1380 P A +Y I + GDR+++TK+DR++G +TV A+ G T+ Sbjct: 753 PLFEKA----VYGSSEIEIAVGDRLKWTKNDRKQGRRNGQEFTVKAIEGTIATIEYKDGQ 808 Query: 1381 REIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMK 1440 + QH+D T + +QG + + G ES YVA+SR+K Sbjct: 809 Q--DSFNFSVPQHLDYGLVSTTYSSQGKTADQVLISAD------YTVGKESFYVAVSRVK 860 Query: 1441 QHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDR 1476 +++YT ++ D + K ++ + Sbjct: 861 SDLKLYTLDKDNLLDLAKASRAKKNPLELLRARQKA 896 >UniRef50_Q8YK83 Alr8034 protein n=2 Tax=Nostoc RepID=Q8YK83_ANASP Length = 1499 Score = 522 bits (1344), Expect = e-146, Method: Composition-based stats. Identities = 216/946 (22%), Positives = 380/946 (40%), Gaps = 114/946 (12%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVD-KDVFTRLLEGR 59 M++ + A +Y+ + YY G+ RW+G+GA++LGL G+VD ++ F+ ++ GR Sbjct: 1 MLT-GKNTEPQQAVHYFM--EGYYQEGT--SRWSGKGAKKLGLSGAVDHQETFSNIVNGR 55 Query: 60 LPDGAD-LSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVE 118 PDG+ L + S++ R D TFSAPKSVS+ A++GGD+RLI AH AV ++ +E Sbjct: 56 SPDGSQNLCARKLDSSQRRAATDFTFSAPKSVSLQALVGGDERLITAHQLAVQKTIKLIE 115 Query: 119 A-LASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ-HNGE----- 171 + TR T+ E + T NLV+A F+H +R+ +P LHTHA+V N+T G+ Sbjct: 116 ERYSYTRATTEKGQELLPTNNLVIAEFDHIETRELDPHLHTHALVMNMTYLEQGKRGVQG 175 Query: 172 --------------WKTLSSDKVGKT------------GFIENVYANQIAFGRLYREKLK 205 WK S T F + ++ N+ G +Y+ L Sbjct: 176 KQGEKKKAEEDEEDWKNFLSSPASPTSPASPAHGSWYSLFNDEIFKNKKFLGMVYQNYLA 235 Query: 206 EQVEALGYETEVVGKHGMWEMPGV---PVEAFSGRSQTIREAVGEDASLKSRDVAALDTR 262 +V+ LGYE + HG +E+ G + FS R Q I A GE+A+ R+ A TR Sbjct: 236 LEVQKLGYEVKARE-HGQFEIKGFRDEDLREFSKRRQQILSAAGENATWAEREAAWTATR 294 Query: 263 KSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQ 322 KQ ++P +W + G ++ + P Q + + Sbjct: 295 NIKQKINPTELKVKWREEAAALGVKF------------VQPIEAQPLLQPRLVSYENLED 342 Query: 323 AIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTS 382 AIA SER V FT D+ + G+ + +L+ L ++K FT+ Sbjct: 343 AIAHCSERNVAFTQEDLEKFILNQ-----GLATDVSQIEPLVQANPELLSLSQQKRDFTT 397 Query: 383 GIHVLDELSVRALSRDIMKQNRVTVHPE------KSVPRTAGYSDAVSVLAQDRPSLAIV 436 V EL+ L + + HPE ++ AV A Sbjct: 398 LAAVNRELATIKLMQSGQGKVSPLAHPEVVENHLETTALNPDQRRAVLTTATTTDQFTAW 457 Query: 437 SGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEG 496 G G AG+ + EL +A G ++ A + + + Q+ + E + Sbjct: 458 QGVAG-AGKTFALKELKEIAAASGYTIKGFAPNSMAAKVLSQELDVQAETVARLLVSELP 516 Query: 497 MAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTG---TGSALMAMKDA 553 + +VD+ LS K+ L LL+ AA +VL+ ++ G+ +++ A Sbjct: 517 LEIELNQIWVVDEAGLLSAKDALALLERAALEQARVLLVGDTKQLSAVEAGNPFKSLQQA 576 Query: 554 GVNTYRWQGGEQRPAT-------------------------IISEPDRNVRYARLAGDFA 588 G+ T ++ A I + A +A ++ Sbjct: 577 GIKTSHLNESNRQRAPKLKLAVDLIADGQIEEGFKRLDENGCIQTVTAESKIAAIAHEYV 636 Query: 589 ASVKAGEESVAQVSGVR-EQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLR 647 + ++G E+ +TQAIR L+T+G LG T+T L L S Sbjct: 637 TATPEQRARTLVLTGTNKERLAITQAIREHLRTEGSLG-TATTITQLQAKDLTSVQMRYT 695 Query: 648 DMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQG---ETQVVRISSLDSSW-- 702 + G V+ TRS+ R +++ Q + + +D G E + +D+ + Sbjct: 696 HNFELGDVV----MPTRSYKRRGLEK--GQLYKVVGKDGDGLKLEASNGQHFQVDTGFNK 749 Query: 703 SLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSD 762 +++ + + VA G+RLR T L G V +++ + + + + Sbjct: 750 AVYHRQNIEVAVGDRLRWTKNDRQLGRRNGQEFVVKAIAGSNAQIEYLHSGQTEFINLQ- 808 Query: 763 SPFTALKLENGWVETPGHSVSDSA-TVFASVTQMAMDNATLNGLARSGRDVRLYSSLDET 821 A L+ V T S +A V + + ++R+ +++LY+ + Sbjct: 809 ---QAQHLDYATVSTTYSSQGKTADRVLIAADYTIGQESFYVAVSRARYELKLYTENKDD 865 Query: 822 RTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQA 867 A + ++ + + + ++ A++A Sbjct: 866 LLALAQSSRAKENALALLRQKELEKQRQSKLEKEKVTSTAIVAKEA 911 Score = 368 bits (943), Expect = 1e-99, Method: Composition-based stats. Identities = 145/717 (20%), Positives = 254/717 (35%), Gaps = 106/717 (14%) Query: 808 SGRDVRLYSSLDETRT-AEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQ- 865 S R ++ S+ E T AE+ A + + ++I + + P + Sbjct: 267 SKRRQQILSAAGENATWAEREAAWTATRNIKQKINPTELKVKWREEAAALGVKFVQPIEA 326 Query: 866 ------QAIHL-----ALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKR 914 + + A+ + +AF+ DL + F T++ Sbjct: 327 QPLLQPRLVSYENLEDAIAHCSERNVAFTQEDL----EKFILNQGLATDVSQIEPLVQAN 382 Query: 915 GDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGE---LMEKLTS 971 +LL + K + A+ E + ++ + G+ V PL E L Sbjct: 383 PELLSLSQQKRD----FTTLAAVNRELATIKLMQSGQGKVSPLAHPEVVENHLETTALNP 438 Query: 972 GQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVG 1031 QR A T+D+FT QG AG GKT + + + + + G P A Sbjct: 439 DQRRAVLTTATTTDQFTAWQGVAGAGKTFALKELKE----IAAASGYTIKGFAPNSMAAK 494 Query: 1032 EM-RSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAG 1090 + + V A+T+A L N ++++DE+ ++ D A Sbjct: 495 VLSQELDVQAETVARLLVSEL------PLEIELNQIWVVDEAGLLSAKDALALLERAALE 548 Query: 1091 GGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQT-PELREAVYSLINRDVE 1149 R + GDT QL A+ G PF+ Q + + + E RQ P+L+ AV + + +E Sbjct: 549 QARVLLVGDTKQLSAVEAGNPFKSLQQ-AGIKTSHLNESNRQRAPKLKLAVDLIADGQIE 607 Query: 1150 RALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLY 1209 L+ Q E A Sbjct: 608 EGFKRLDENGCIQTVTAESKIA-------------------------------------- 629 Query: 1210 EAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANI 1269 AI +Y TPE R +TL++T N++R + I + G LG + L ++ Sbjct: 630 -AIAHEYVTATPEQRARTLVLTGTNKERLAITQAIREHLRTEGSLGT-ATTITQLQAKDL 687 Query: 1270 RDGELRRLSTWETHRDAL--------VLVDNVYHRIAGISKDDGLITLQDAEGNTRLISP 1321 ++R +E + L +++ G D + L+ + G + Sbjct: 688 TSVQMRYTHNFELGDVVMPTRSYKRRGLEKGQLYKVVGKDGDG--LKLEASNGQHFQVD- 744 Query: 1322 REAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLS--DGQQ 1379 +Y I V GDR+R+TK+DR+ G + V A++G + + Q Sbjct: 745 ---TGFNKAVYHRQNIEVAVGDRLRWTKNDRQLGRRNGQEFVVKAIAGSNAQIEYLHSGQ 801 Query: 1380 TREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRM 1439 T I Q QH+D A T + +QG + + G ES YVA+SR Sbjct: 802 TEFINL---QQAQHLDYATVSTTYSSQGKTADRVLIAAD------YTIGQESFYVAVSRA 852 Query: 1440 KQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAA 1496 + +++YT+N+ ++ K A + K + +R +E A Sbjct: 853 RYELKLYTENKDDLLALAQSSRAKENALALLRQKE----LEKQRQSKLEKEKVTSTA 905 >UniRef50_B1XRA4 DNA helicase, TrwC and TraI like protein n=1 Tax=Synechococcus sp. PCC 7002 RepID=B1XRA4_SYNP2 Length = 1249 Score = 496 bits (1277), Expect = e-138, Method: Composition-based stats. Identities = 234/956 (24%), Positives = 394/956 (41%), Gaps = 111/956 (11%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGE--RWAGRGAEQLGLQGSV-DKDVFTRLLE 57 M++IA + + AG+YY K+NYY E +W G+GA LGL G + D +F +L+ Sbjct: 1 MLTIATM-TPAKAGSYY--KENYYAEEEQVEFSQWWGKGATALGLSGKISDGKIFQNILQ 57 Query: 58 GRLPDGADLSRMQDGSNRHR-PGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQ 116 G+ DG R + G DLTFSAPKSVS+ A++ D+ LI+AHNQAV+ + Sbjct: 58 GKTADGQTQLRQAPPKGKEAIAGTDLTFSAPKSVSIAALVNQDQDLIEAHNQAVERVLSL 117 Query: 117 VEA-LASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH-NGEWKT 174 +E TRV + N+ +A F HDT+R+ P LHTH +V N+ Q +G W++ Sbjct: 118 IEERYGETRVNK----QHTPVKNICVAKFLHDTNRELNPNLHTHCLVMNMAQDASGIWRS 173 Query: 175 LSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP---V 231 ++ +Y ++I G+LYR +L + V+ LGYE E+ G++E+ G V Sbjct: 174 AAN---------RLLYQHRILLGKLYRNELAQAVQNLGYEIEIRA-DGLFELKGYTREQV 223 Query: 232 EAFSGRSQTIREAV---GEDASLKSRDVAALDTRKSKQH-VDPEIKMAEWMQTLKETGFD 287 E FS R Q I E + G + + ++R A +TRK KQH VD + + EW T + G D Sbjct: 224 EGFSDRHQQILEYLKTEGLEDTNENRIKALFETRKIKQHDVDRQALLVEWQTTAE--GLD 281 Query: 288 IRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGIL 347 I + G ++ + V QA+ ER FT D+ V Sbjct: 282 IEHPTPNLE------------YPVTGKNLAELVAQAVRHSEERTAIFTREDLEVFIVA-- 327 Query: 348 PPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQ--NRV 405 P E A ID +LI R + ++ E AL + + + Sbjct: 328 EPTGHSFEEIEAAIDA---NPRLI---RRGLRLATEESLIREKMTIALMQAGQGKLAPML 381 Query: 406 TVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQI 465 T + S T +DAV+ + + G G AG+ + LV +A+ QG EV Sbjct: 382 TTQTQLSEVLTTSQTDAVNHALSSQDRVVGWVGVAG-AGKTFTLNTLVKIAQAQGIEVSG 440 Query: 466 IAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGA 525 A D S + + + + + L + ++D+ KLS ++ LL + Sbjct: 441 FAPDASSAEVLGDEVGIGTDTV-AYHLLQQHEPSQKRQLWLIDEAGKLSAQKAYQLLLKS 499 Query: 526 ARHNVQVLITDSGQR---TGTGSALMAMKDAGVN---------------------TYRWQ 561 ++ N QVL+ ++ G+ ++ D G++ TY Sbjct: 500 SQQNAQVLLVGDPKQLTAVNAGAPFKSLIDNGLSASHLKDFLRQKDSIIARAVQLTYHNL 559 Query: 562 GGE-----QRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGV-REQAILTQAIR 615 GGE Q+ + PD R ++A + +A +SG RE+ + +R Sbjct: 560 GGEAIAWLQKHGKVSEIPDIEDRAQQIAAAYLKLNEAERAETLVLSGTHRERHGIIHQLR 619 Query: 616 SELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMV---MEQWNPETRSHDRYVID 672 LK +G + E LS + + Y G V ++ N RS RY + Sbjct: 620 VGLKREGKIQETEYLTETLSRKDMTEEQKQHARFYAVGDVLIPLKDHNCLKRS-KRYQVT 678 Query: 673 RVTAQSHSL---TLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRV 729 +++ +L + +G ++ +F ++P+A G+RL+ T + Sbjct: 679 QISGDDVTLNNHITLNMKGLKYPLKT-------EVFTKNQLPIAVGDRLKWTRNNRPQKR 731 Query: 730 SGGDRLQVASVSEDAMTV-VVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSA-T 787 + G + + V VV + ++D ++ V T S +A Sbjct: 732 TNGREFTIIGIDSLTCLVSVVDDQGRLDEFSLNDL----NHCDHAIVGTVYSSQGKTAKQ 787 Query: 788 VFAS-VTQMAMDNAT-LNGLARSGRDVRLYSSLDETRTAEKLARHPSFTV-VSEQIKTRA 844 VF S ++ + L L+R+ DV ++++ + +LA V SE +K + Sbjct: 788 VFVSFGNDPTVNRESVLVALSRAKYDVTIWTTNAQKL--RELADISHNQVNPSELLKEQG 845 Query: 845 GETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTG 900 + + A H + +A V + + +D+ G Sbjct: 846 IKLPIPPAPLHLNEKHWLERVEKSGIAPEVAALNAESLAGMDVYERLLEDHLATLG 901 Score = 340 bits (872), Expect = 2e-91, Method: Composition-based stats. Identities = 121/707 (17%), Positives = 248/707 (35%), Gaps = 92/707 (13%) Query: 828 ARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTP-AQQAIHLALPVVESKKLAFSMVD 886 + + +T A +E + + + + + A+ E + F+ D Sbjct: 261 QHDVDRQALLVEWQTTAEGLDIEHPTPNLEYPVTGKNLAELVAQAVRHSEERTAIFTRED 320 Query: 887 LLTEAKSFAAEGTGFTELGGEINA---QIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSI 943 L G F E+ I+A I+RG L + S EK Sbjct: 321 LEVFIV-AEPTGHSFEEIEAAIDANPRLIRRG-------------LRLATEESLIREKMT 366 Query: 944 LRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFR 1003 + + G+ + P++ +L E LT+ Q A L + DR G AG GKT Sbjct: 367 IALMQAGQGKLAPMLT-TQTQLSEVLTTSQTDAVNHALSSQDRVVGWVGVAGAGKTFTLN 425 Query: 1004 AVMSAVNMLPESERPRVVGLGPTHRAVGEM-RSAGVDAQTLASFLHDTQLQQRSGETPDF 1062 ++ + +++ V G P + + G+ T+A L P Sbjct: 426 TLV----KIAQAQGIEVSGFAPDASSAEVLGDEVGIGTDTVAYHLLQQ-------HEPSQ 474 Query: 1063 SNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAAD 1122 L+L+DE+ + + + + + GD QL A+ G PF+ + Sbjct: 475 KRQLWLIDEAGKLSAQKAYQLLLKSSQQNAQVLLVGDPKQLTAVNAGAPFKSLID-NGLS 533 Query: 1123 VAIMKEIVRQTPELR-EAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSH 1181 + +K+ +RQ + AV + A++ L+ H Sbjct: 534 ASHLKDFLRQKDSIIARAVQLTYHNLGGEAIAWLQK-----------------------H 570 Query: 1182 SQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLN 1241 + +++ + + +A + I Y R +TL+++ + +R + Sbjct: 571 GKVSEIPDIEDRA---------------QQIAAAYLKLNEAERAETLVLSGTHRERHGII 615 Query: 1242 SMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETH------RDALVLVDNVYH 1295 + ++ G++ + + + L+ ++ + + + + +D L + + Sbjct: 616 HQLRVGLKREGKIQETEYLTETLSRKDMTEEQKQHARFYAVGDVLIPLKDHNCLKRSKRY 675 Query: 1296 RIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERG 1355 ++ IS DD + L P ++T + + + GDR+++T+++R + Sbjct: 676 QVTQISGDDVTLNNHITLNMKGLKYPL-----KTEVFTKNQLPIAVGDRLKWTRNNRPQK 730 Query: 1356 YVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIA 1415 +T+ + + +S + H D A T + +QG + Sbjct: 731 RTNGREFTIIGIDSLTCLVSVVDDQGRLDEFSLNDLNHCDHAIVGTVYSSQGKTAKQVFV 790 Query: 1416 LEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFE---- 1471 G + ES VALSR K V ++T N Q + + + + ++ + Sbjct: 791 SFGND----PTVNRESVLVALSRAKYDVTIWTTNAQKLRELADISHNQVNPSELLKEQGI 846 Query: 1472 --PKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPARFI 1516 P P + E+ + E +A A L LAG D R + Sbjct: 847 KLPIPPAPLHLNEKHWLERVEKSGIAPEVAALNAESLAGMDVYERLL 893 >UniRef50_C1F5K2 Conjugative relaxase domain protein n=4 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F5K2_ACIC5 Length = 926 Score = 495 bits (1273), Expect = e-138, Method: Composition-based stats. Identities = 220/933 (23%), Positives = 373/933 (39%), Gaps = 111/933 (11%) Query: 1 MMSIAQVRSAGSAGNYYTDK-----DNYYVLGSM-GERWAGRGAEQLGLQGSVDKDVFTR 54 M++I++ SA A Y+ + NY+ G W G+ A++ GL G+V F R Sbjct: 1 MLNISKPLSASQAQTYHAKEFTAAEQNYWKQGDTIQGEWHGKLADEFGLSGTVGAAEFAR 60 Query: 55 LLEGRLPDGADLSRMQD-------------GSNRHRPGYDLTFSAPKSVSMMAMLGGDKR 101 L EG+ P+ HR G+D TFSAPKS+S+ A++GGD R Sbjct: 61 LSEGQHPETGKQLVSHRVVHEYKNSEGKTVSPVEHRAGWDATFSAPKSISLTALVGGDDR 120 Query: 102 LIDAHNQAVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQE----PQLH 157 + +AH +AV+ A+ ++E R+ + +ET TG A F HDT+R + PQLH Sbjct: 121 VREAHREAVNVALNELEKYTQARIGGNNPAET--TGKFAAAKFEHDTARPVDGYAAPQLH 178 Query: 158 THAVVANVTQHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEV 217 TH VV N+T+ + + + +++ +Q +Y+ L ++ LGYE E Sbjct: 179 THVVVFNMTERD--------NGAMRALQPHSLFESQQFATAVYQSHLTYKLRDLGYEIEA 230 Query: 218 VGKHGMWEMPGVP---VEAFSGRSQTIREAVGEDA--SLKSRDVAALDTRKSKQHVDPEI 272 GK G ++ G +EA S R Q I EA+G ++ +AA +TR K + P Sbjct: 231 -GKSGAPDVKGFTAAYLEASSPRRQQIEEALGRSGFTGPEAAQIAAHNTRDKKVILSPAE 289 Query: 273 KMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKV 332 +A Q E G AA QR +T P ++ V++AVT A ER+ Sbjct: 290 ILAAHKQIADEFGNQAERVVAAARQRRMEQTQERLP-NERQQQVREAVTFARDKGFEREA 348 Query: 333 QFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDRE----KGLFTSGIHVLD 388 + + E RA + I+ + + + FT+ + Sbjct: 349 VVDERALYVDALRRGMGE-MTYPEVRASFEARIASGEFKQITDDGSKAGRRFTTATTIKA 407 Query: 389 ELSVRALSRDIMKQNRVTVHPEKSVPR-------TAGYSDAVSVLAQDRPSLAIVSGQGG 441 E + RD + + E +VP A V + + + G+ G Sbjct: 408 ESEIVQKVRDGQSRAPQIMGIENAVPLVDSRPHFNAAQKRVVEEVLTSYDRVQGLQGRAG 467 Query: 442 AAGQRERVAELVMMAREQGREVQIIAADRRSQMNMK----QDERLSGELITGRRQLLEGM 497 +G+ +A + A G V+ A R+ ++ Q + L L G Q+ G Sbjct: 468 -SGKTSVLATIREGAERNGYAVEGFAPTSRAAKQLRDAGIQADTLQRFLAGGGLQVAGGP 526 Query: 498 AFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTG--TGSALMAMKDAGV 555 A +VD+ S ++ L+ A + +LI D+ Q G G M++AG+ Sbjct: 527 A--RKHLYMVDESSLASTQQMRDFLNKIAPQDKVLLIGDTRQHQGVDAGKPFEQMQEAGM 584 Query: 556 NTYR-----WQGGE---------------------QRPATIISEPDRNVRYARLAGDFAA 589 + Q Q I D R +A D+AA Sbjct: 585 RMAQLDQIMRQKDPDLLKAVEHLSNNETALGVEMLQHQGRITQIEDPQQRITAIAKDYAA 644 Query: 590 SVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVW-LDSRSRYLRD 648 E ++ + + QA+R EL+ GV+ + +M L+P + R Sbjct: 645 H---PESTLIVSPDNASRRAINQAVRQELQALGVVDKTDHSMRVLAPRNDMTGADREWAA 701 Query: 649 MYRPGMVM------EQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSW 702 Y+PG V+ ++ E RS+ + V A + +T+R G+ S L Sbjct: 702 RYQPGDVLHYVRGSKEHGIEARSYAQVVTT--NAPENLVTVRKVDGQQVTYDPSRL-RGV 758 Query: 703 SLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSD 762 + +R + A G+R+++T L+V+ D + + + ++ + VS Sbjct: 759 AAYREIEREFAIGDRVQLTAPNRDLQVANRDLGTLENFDDAGRITLLMDSGK----NVSF 814 Query: 763 SPFTALKLENGWVETPGHSV-SDSATVFASV-TQMAMD----NATLNGLARSGRDVRLYS 816 P ++G+ T S SA V ++ TQ+ + ++R+ +DV++++ Sbjct: 815 DPREMRHFDHGYAVTSHSSQGLTSARVLVNIDTQVHPELINGRFAYVSVSRASQDVQIFT 874 Query: 817 SLDETRTAEKLARHPSFTVVSEQIKTRAGETSL 849 D AE L+ S T +KT L Sbjct: 875 -NDAANLAENLSHDASKTSALPLVKTATVIPDL 906 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 145/685 (21%), Positives = 255/685 (37%), Gaps = 74/685 (10%) Query: 806 ARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQ 865 A + RD ++ S E A K F +E++ A + +E + + Sbjct: 275 AHNTRDKKVILSPAEILAAHK-QIADEFGNQAERVVAAARQRRMEQTQERLPNERQQQVR 333 Query: 866 QAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKG 925 +A+ A ++ L +A + E+ A+I G+ + Sbjct: 334 EAVTFARDKGFEREAVVDERALYVDALRRGMGEMTYPEVRASFEARIASGEFKQITDDGS 393 Query: 926 YGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPG----ELMEKLTSGQRAATRMIL 981 + + +AE I++ + +G+ +M + + Q+ +L Sbjct: 394 KAGRRFTTATTIKAESEIVQKVRDGQSRAPQIMGIENAVPLVDSRPHFNAAQKRVVEEVL 453 Query: 982 ETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVDAQ 1041 + DR +QG AG GKT+ + E V G PT RA ++R AG+ A Sbjct: 454 TSYDRVQGLQGRAGSGKTSVLATIREG----AERNGYAVEGFAPTSRAAKQLRDAGIQAD 509 Query: 1042 TLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTD 1101 TL FL LQ G L+++DESS+ M IA + + GDT Sbjct: 510 TLQRFLAGGGLQVAGGPA---RKHLYMVDESSLASTQQMRDFLNKIAPQD-KVLLIGDTR 565 Query: 1102 QLQAIAPGQPFRLQQTRSAADVAIMKEIVRQT-PELREAVYSLINRDVERALSGLESVKP 1160 Q Q + G+PF Q + +A + +I+RQ P+L +AV L N + + L+ Sbjct: 566 QHQGVDAGKPFEQMQE-AGMRMAQLDQIMRQKDPDLLKAVEHLSNNETALGVEMLQ---- 620 Query: 1161 SQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRT 1220 + ++ + + P AI +DY Sbjct: 621 ----------------------HQGRITQIED------------PQQRITAIAKDYAAHP 646 Query: 1221 PEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTW 1280 E TLIV+ N RR +N + + G + K + VL N G R + Sbjct: 647 ----ESTLIVSPDNASRRAINQAVRQELQALGVVDKTDHSMRVLAPRNDMTGADREWAAR 702 Query: 1281 ETHRDALVLVDN---------VYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTL 1331 D L V Y ++ + + L+T++ +G P GV Sbjct: 703 YQPGDVLHYVRGSKEHGIEARSYAQVVTTNAPENLVTVRKVDGQQVTYDPSRL--RGVAA 760 Query: 1332 YTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVS--GDSVTLSDGQQTREIRPGQEQ 1389 Y GDR++ T +R+ + T+ G L D + P + Sbjct: 761 YREIEREFAIGDRVQLTAPNRDLQVANRDLGTLENFDDAGRITLLMDSGKNVSFDP---R 817 Query: 1390 AEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDN 1449 +H D YA+T+H +QG + + T+ + +L+ G AYV++SR Q VQ++T++ Sbjct: 818 EMRHFDHGYAVTSHSSQGLTSARVLVNIDTQVHPELING-RFAYVSVSRASQDVQIFTND 876 Query: 1450 RQGWTDAINNAVQKGTAHDVFEPKP 1474 + +++ K +A + + Sbjct: 877 AANLAENLSHDASKTSALPLVKTAT 901 >UniRef50_B4WV74 TrwC relaxase family n=4 Tax=Synechococcus sp. PCC 7335 RepID=B4WV74_9SYNE Length = 1090 Score = 493 bits (1268), Expect = e-137, Method: Composition-based stats. Identities = 220/906 (24%), Positives = 364/906 (40%), Gaps = 101/906 (11%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLG----SMGERWAGRGAEQLGLQGSVDKDVFTRLL 56 M++ A V+ A AG+YY +KD+YY G +W G+GA LGL G VD+ F +LL Sbjct: 1 MLTNANVK-AEHAGSYY-EKDDYYTQGDPDLQSDTQWQGKGAAVLGLSGPVDQSAFQQLL 58 Query: 57 EGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQ 116 G+ P G L + +HR D TFSAPKSVS+ ++ D+R+I AH+QAV + Sbjct: 59 YGQTPSGESLHSQKIDPKKHRAATDYTFSAPKSVSIAGLIQKDRRVIKAHDQAVSTVLSV 118 Query: 117 VE-ALASTRVMTD-GQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ-HNGEWK 173 +E A TRV V TGN++ A F H+TSR+Q+PQLHTH VV N TQ NG W+ Sbjct: 119 LESRYAQTRVRHGPSIRSRVTTGNIIAATFRHETSREQDPQLHTHCVVINSTQLANGRWQ 178 Query: 174 TLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP--- 230 ++++ E + N+ G Y+ +L Q+ LGYE G +G++E Sbjct: 179 SMAN---------EEIVKNRKLLGEFYQNELAVQLRQLGYEIAPQG-NGLFECKSYEQPL 228 Query: 231 VEAFSGRSQTIREAVG-----------EDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQ 279 + FS RS+ I + + S K ++ A L TR KQ V E+ +A W Sbjct: 229 LNLFSTRSRQIEAYIDKWEAKLQAEGRKPLSPKQKEQATLATRLKKQSVPREVLLAGWES 288 Query: 280 TLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDV 339 + + ++ L TL+ + A T+ ++ +ER+ F V Sbjct: 289 AISSGEVKLPEIPNS------LPTLSEKVQVAVDGKLMNAATEGVSHAAERESVFKREKV 342 Query: 340 LARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDI 399 + E+ + E + + AIS+ L+P + L+T+ + EL A+ + Sbjct: 343 ERFVL-----EHHLGEHSFDELQSAISQTDLVPAEE---LYTTEAAIERELDTIAMMKQG 394 Query: 400 MKQNRVTVH------------PEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRE 447 Q E T G A+ A + L G G AG+ Sbjct: 395 QGQVAEIAPLSDASAFVAATVAETDAVLTEGQHLAILETAISQDQLIAWQGVAG-AGKTY 453 Query: 448 RVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGSTVIV 507 + L +A EQG EV A ++ + ++ + G + + + IV Sbjct: 454 SLKLLAQLATEQGYEVTGYAPSAQAANVLAEETNIEGSTVARLLHSQDRDDSDKKAIWIV 513 Query: 508 DQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTG---TGSALMAMKDAGVNTYRWQGGE 564 D+ LS K+ +LL A + +V++ ++ G+ +++ AGV T + Sbjct: 514 DEAGLLSAKDAHSLLKKAQVNEARVILVGDTRQLSAVEAGNPFRSLQSAGVATCYLEESR 573 Query: 565 Q--------------------------RPATIISEPDRNVRYARLAGDFAASVKAGEESV 598 + R I + +R + D+ + Sbjct: 574 RQKTEALQTAVVCLAAGEQLEGLETLDRAGMISKVENDEIRQLAITRDYIRLSPEERQQT 633 Query: 599 AQVSGV-REQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVME 657 +SG RE+ L IRS L+ +G LG M +L Y V+ Sbjct: 634 LILSGTNRERLALAGTIRSALQREGTLGEDTFKMGSLRAKDRTKPQLKYACAYALNDVIV 693 Query: 658 QWNPETR----SHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVA 713 R ++Y + + ++ LTL A G T ++ + + +++ VA Sbjct: 694 PVKDYRRYGMQRREQYRVVGLDIAANRLTLAAADGRTFAFDPATCAEK-TTYEVQQLRVA 752 Query: 714 DGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENG 773 GE+LR T G + V SV + + E + + + L+ Sbjct: 753 PGEQLRWTRNEAVAGARNGQTVTVESVDASGSATLRDPKGERLDVSLRGQQY----LDYA 808 Query: 774 WVETPGHSVSDSA-TVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPS 832 V T S +A V A++ ++R+ + LY++ D +K R + Sbjct: 809 LVSTTYSSQGKTADRVLAAIDSTLSKEGLYVAVSRAKSSLSLYTT-DRAALYKKAQRSAA 867 Query: 833 FTVVSE 838 S+ Sbjct: 868 KKNPSD 873 Score = 332 bits (850), Expect = 9e-89, Method: Composition-based stats. Identities = 129/644 (20%), Positives = 216/644 (33%), Gaps = 90/644 (13%) Query: 847 TSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGG 906 SL T + A+ A + ++ F + F EL Sbjct: 302 NSLPTLSEKVQVAVDGKLMNAATEGVSHAAERESVFKREKVERFVLEHHLGEHSFDELQS 361 Query: 907 EINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAV---------MPL 957 I L + A+ E E + + +G+ V Sbjct: 362 AI-----------SQTDLVPAEELYTTEAAIERELDTIAMMKQGQGQVAEIAPLSDASAF 410 Query: 958 MERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESER 1017 + E LT GQ A + D+ QG AG GKT + + L + Sbjct: 411 VAATVAETDAVLTEGQHLAILETAISQDQLIAWQGVAGAGKTYSLK----LLAQLATEQG 466 Query: 1018 PRVVGLGPTHRAVGEM-RSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVG 1076 V G P+ +A + ++ T+A LH ++++DE+ ++ Sbjct: 467 YEVTGYAPSAQAANVLAEETNIEGSTVARLLHSQD------RDDSDKKAIWIVDEAGLLS 520 Query: 1077 NTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPE- 1135 D R + GDT QL A+ G PFR Q + ++E RQ E Sbjct: 521 AKDAHSLLKKAQVNEARVILVGDTRQLSAVEAGNPFRSLQ-SAGVATCYLEESRRQKTEA 579 Query: 1136 LREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAM 1195 L+ AV L + L L+ Sbjct: 580 LQTAVVCLAAGEQLEGLETLDRAGMI---------------------------------- 605 Query: 1196 LKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELG 1255 + + AI RDY +PE R+QTLI++ N +R L I ++ G LG Sbjct: 606 ----SKVENDEIRQLAITRDYIRLSPEERQQTLILSGTNRERLALAGTIRSALQREGTLG 661 Query: 1256 KEQVMVPVLNTANIRDGELRRLSTWETHRDAL--------VLVDNVYHRIAGISKDDGLI 1307 ++ + L + +L+ + + + + +R+ G+ + Sbjct: 662 EDTFKMGSLRAKDRTKPQLKYACAYALNDVIVPVKDYRRYGMQRREQYRVVGLDIAANRL 721 Query: 1308 TLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAV 1367 TL A+G T P A T Y +RV G+++R+T+++ G TV +V Sbjct: 722 TLAAADGRTFAFDP--ATCAEKTTYEVQQLRVAPGEQLRWTRNEAVAGARNGQTVTVESV 779 Query: 1368 SGD-SVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLM 1426 S TL D + R + +Q++D A T + +QG + +A + Sbjct: 780 DASGSATLRDPKGER--LDVSLRGQQYLDYALVSTTYSSQGKTADRVLAAIDS------T 831 Query: 1427 AGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVF 1470 E YVA+SR K + +YT +R + K D Sbjct: 832 LSKEGLYVAVSRAKSSLSLYTTDRAALYKKAQRSAAKKNPSDFL 875 >UniRef50_UPI00016C3594 TrwC protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3594 Length = 896 Score = 488 bits (1255), Expect = e-135, Method: Composition-based stats. Identities = 203/891 (22%), Positives = 344/891 (38%), Gaps = 96/891 (10%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRL 60 ++ + VRS+ A YY+ D Y + W G GA LGL G+V++ F R+ + Sbjct: 8 VLRVMVVRSSKGAKQYYSAGDYYSAGQELPGEWGGIGAAHLGLTGTVERGEFARMCDNFH 67 Query: 61 PDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEAL 120 P ++ +R R +DL + PKS+S++ L L+ A QAV+ +R++E Sbjct: 68 PRTGQRFTLRTNVSR-RVAFDLNWHVPKSLSVLFGLTQSAELLAAFRQAVEETMRELELR 126 Query: 121 ASTRVMTDGQSETVLTGNLVMALFNHDTSRD----QEPQLHTHAVVANVTQH--NGEWKT 174 A TRV G ++ TGNL A + H T+R +P LH HAVV N T G WK Sbjct: 127 AQTRVRIKGANQVRTTGNLTWASYVHTTARPVGGVPDPHLHCHAVVFNATFDPIEGRWKA 186 Query: 175 LSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP---V 231 L +V + F + +L ++ LGY+T K WE+ GVP + Sbjct: 187 LDLCQVKRA---------APYFEATFHARLAAKLRHLGYDTVRTSK--GWELAGVPRRVL 235 Query: 232 EAFSGRSQTIREAVGED--ASLKSRDVAALDTRKSK-QHVDPEIKMAEWMQTLKETGFDI 288 E FS R++ I E + ++D TR+ K + A W + TG ++ Sbjct: 236 EEFSRRTKLIERVAEEQEITNAHAKDAIGALTRERKSTALSLSKLRARWRARI--TGDEL 293 Query: 289 RAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILP 348 RA A + D V+ A+ A+ ER+ + +LA + Sbjct: 294 RALELVAAKALDRPPRNLNA-------VRDALHYAVEHCFERESAVSVDRLLAVAL---- 342 Query: 349 PENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVL-DELSVRALSRDIMKQNRVTV 407 GV E A I A L+ +R+ + + VL +E+ + A +RD V Sbjct: 343 -RRGVGEVAVNEIRAAFKGLGLLVQERDGVEYATAREVLAEEIRMLAFARDGRGICARLV 401 Query: 408 HPEKSVPRTA---GYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQ 464 + R AV+ + + ++ G G G+ + E V + G V Sbjct: 402 PNHSPIAREWLSNEQKAAVAHVLGSHDRVTLLRGAAG-VGKTALMIEAVEAIEKSGTRVI 460 Query: 465 IIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFT-PGSTVIVDQGEKLSLKETLTLLD 523 +A + + + E S R + G + VD+ L L D Sbjct: 461 PLAPSAAASRGVLRAEGFSSADTVARFLVDAEFQERARGHVIWVDEAGLLGTVALAALFD 520 Query: 524 GAARHNVQVLI-TDSGQRTGT--GSALMAMKDA------GVNTYRWQGGEQRPAT----- 569 A R + +V++ D+ Q +G G+AL ++ V R Q G R A Sbjct: 521 TAGRLDARVVLVGDTRQHSGVARGTALKLLECEAGLAPFAVTGIRRQHGRYREAVGLLSE 580 Query: 570 --------------IISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIR 615 + E D +A ++ + + G+ + E +T+ IR Sbjct: 581 GRAVDALDVLDRLGWVRECDHEAGAQLIAAEYLLAHREGKSVLVVSPTHAEGERVTRTIR 640 Query: 616 SELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWN--PETRSHDRYVIDR 673 +EL + VL L R Y PGMV++ + P RS R+V+ Sbjct: 641 TELLSAQVLSGEPRFFPQLVAANFTIAERSDAANYEPGMVLQFFRHAPGFRSASRWVV-- 698 Query: 674 VTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIP---GLRVS 730 V+A + L ++DA G+ ++ + + + +F ++ + G+R+R+T G R+ Sbjct: 699 VSAAPNVLRVQDASGDDALLPL-HFANRFQVFESRELELRIGDRVRLTSNERTRDGHRLD 757 Query: 731 GGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSA-TVF 789 G V + + + G + P+ + +G+ T S + V Sbjct: 758 NGAHGVVKRFTSNGDIQLESG---------AVVPYDVGHVAHGYCVTSHASQGRTVDQVL 808 Query: 790 ASVTQMAMDN----ATLNGLARSGRDVRLYSSLDE--TRTAEKLARHPSFT 834 S + + ++R V L + AE+ P+ T Sbjct: 809 VSQSAESFAASSVEQLYVSVSRGRERVLLITDDKAGLRLAAERSDPRPAAT 859 Score = 344 bits (882), Expect = 2e-92, Method: Composition-based stats. Identities = 145/708 (20%), Positives = 249/708 (35%), Gaps = 83/708 (11%) Query: 806 ARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQ 865 A + + + ++ + + RA E A+ L+ + Sbjct: 257 AHAKDAIGALTRERKSTALSLSKLRARWRARITGDELRALELVAAKALDRPPRNLNA-VR 315 Query: 866 QAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKG 925 A+H A+ ++ A S+ LL A E+ G L+ Sbjct: 316 DALHYAVEHCFERESAVSVDRLLAVALRRGVGEVAVNEIRAAFKGL---GLLVQERDGVE 372 Query: 926 YGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSD 985 Y +R E +L +G+ L+ E L++ Q+AA +L + D Sbjct: 373 YA----TAREVLAEEIRMLAFARDGRGICARLVPNHSPIAREWLSNEQKAAVAHVLGSHD 428 Query: 986 RFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAV-GEMRSAGVD-AQTL 1043 R T+++G AGVGKT + A+ E RV+ L P+ A G +R+ G A T+ Sbjct: 429 RVTLLRGAAGVGKTALMIEAVEAI----EKSGTRVIPLAPSAAASRGVLRAEGFSSADTV 484 Query: 1044 ASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQL 1103 A FL D + Q+R+ + +DE+ ++G +A + R V GDT Q Sbjct: 485 ARFLVDAEFQERA------RGHVIWVDEAGLLGTVALAALFDTAGRLDARVVLVGDTRQH 538 Query: 1104 QAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQV 1163 +A G +L + + + I RQ REAV L AL L+ + Sbjct: 539 SGVARGTALKLLECEAGLAPFAVTGIRRQHGRYREAVGLLSEGRAVDALDVLDRL----- 593 Query: 1164 PRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEA 1223 V E H A+L I +Y Sbjct: 594 ----------GWVRECDHEAGAQL------------------------IAAEYL-LAHRE 618 Query: 1224 REQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETH 1283 + L+V+ + + + I A L E P L AN E + +E Sbjct: 619 GKSVLVVSPTHAEGERVTRTIRTELLSAQVLSGEPRFFPQLVAANFTIAERSDAANYEPG 678 Query: 1284 RDALVLVD----NVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRV 1339 R +S ++ +QDA G+ L+ A ++ + + Sbjct: 679 MVLQFFRHAPGFRSASRWVVVSAAPNVLRVQDASGDDALLPL--HFANRFQVFESRELEL 736 Query: 1340 GTGDRMRFTKSDRERG---YVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDL 1396 GDR+R T ++R R + V + S+G E H+ Sbjct: 737 RIGDRVRLTSNERTRDGHRLDNGAHGVVKRFT------SNGDIQLESGAVVPYDVGHVAH 790 Query: 1397 AYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDA 1456 Y +T+H +QG + + + E + E YV++SR ++ V + TD++ G A Sbjct: 791 GYCVTSHASQGRTVDQVLVSQSAESF--AASSVEQLYVSVSRGRERVLLITDDKAGLRLA 848 Query: 1457 INNAVQKGTAHDVFEPK------PDREVMNAERLFSTARELRDVAAGR 1498 + + A ++F P R ++ + AR + +V GR Sbjct: 849 AERSDPRPAATEIFAPSALWRSWAQRRIVREPQPNKRARGVAEVLVGR 896 >UniRef50_A8ZPV0 Putative uncharacterized protein n=1 Tax=Acaryochloris marina MBIC11017 RepID=A8ZPV0_ACAM1 Length = 2018 Score = 486 bits (1250), Expect = e-135, Method: Composition-based stats. Identities = 196/866 (22%), Positives = 337/866 (38%), Gaps = 94/866 (10%) Query: 32 RWAGRGAEQLGLQGSVDKDVFTRLLEGRLPDGADLSRM-QDGSNRHRPGYDLTFSAPKSV 90 +W G GA LGLQG+V + F ++ G +G L ++ ++ R G D TFS PKS Sbjct: 38 QWYGYGAYALGLQGNVHRADFKKVFYGYNLEGERLRGFPKNEKHKERVGDDFTFSMPKSA 97 Query: 91 SMMAMLGGDKRLIDAHNQAVDFAVRQV-EALASTRVMTDGQSETVLTGNLVMALFNHDTS 149 SM+ +G D RL DAH QAV + V E TRVM G T+ T NLV+AL NH TS Sbjct: 98 SMVLHIGCDYRLFDAHLQAVKRTLDIVQERYGQTRVMIGGVRHTLNTKNLVIALINHHTS 157 Query: 150 RDQEPQLHTHAVVANVTQ-HNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQV 208 R +PQ+HTHA+V N TQ +G W++ +D + Q G++YR+ L E + Sbjct: 158 RANDPQVHTHALVMNTTQMPDGTWRSRKND----------LMYMQECLGQIYRQYLAENI 207 Query: 209 EALGYETEVVGKHGMWEMPGVP---VEAFSGRSQTIREAVGED---ASLKSRDVAALDTR 262 + LGY+ +E+ G+ VE FS RSQ I + + +D A+ ++ A L +R Sbjct: 208 QNLGYKIYAT--KDAFEIEGITREQVETFSKRSQQIFKQLEKDGLEATTANKQTACLKSR 265 Query: 263 KSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPG--PASQDGPD-VQQA 319 K+K+ + D++A A Q D R P P + PD V A Sbjct: 266 KAKEP--------------GQKLTDLQAVWQQAAQTLDYRMPQPDLSPQFEYRPDQVTTA 311 Query: 320 VTQAIAGLSERKVQFTYTDVLARTVGIL-PPENGVIERARAGIDEAISREQLIPLDREKG 378 + AI LSER + FT + G + I +A + +E ++ + Sbjct: 312 LHSAINHLSERSITFTREQIEQFVFGNIRQFRFEDISQAMSACEELLTLRDQVN---NTE 368 Query: 379 LFTSGIHVLDELSVRA------LSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPS 432 FT+ + E ++ ++ + K G +AV+ Sbjct: 369 RFTTVAALEREAAIHQSWDLGRQTQTPLMSEYSVRELLKESGLNVGQLEAVAKTLAHSDQ 428 Query: 433 LAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQ 492 + G G G+ + +L + ++Q A ++ + ++ + + + Sbjct: 429 FILWHGLAG-VGKTRTLGQLKQVLTHLNLDIQGYAPTTKASKVLGKELGIKTNTVA--KL 485 Query: 493 LLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR---TGTGSALMA 549 L+ + P IVD+ + ++ L LL A N +VL ++ GS + + Sbjct: 486 LVSKPSLAPHQLWIVDEAGMIGSQQMLELLGRARAANARVLFVGDTKQNPSITAGSPMRS 545 Query: 550 MKDAGVNTY------RWQGGEQRPAT--------------------IISEPDRNVRYARL 583 + AG T+ R + Q+ A I D ++R Sbjct: 546 LIRAGATTFHISQIVRQRNTVQKRAVSLIAKGQGLNAVSLLKEHGYIQEIKDEDIRQQTF 605 Query: 584 AGDFAASVKAGEESVAQVSGVR-EQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSR 642 A + V+G E+ + +R LK +G LG + + L+ L Sbjct: 606 ADYYLQLSPEERAETLLVTGTNKERLAIMSLLRQGLKAEGTLGEEDHHIQQLASRHLTIE 665 Query: 643 SRYLRDMYRPGMVMEQWNPETRS-----HDRYVIDRVTAQSHSLTLRDAQGETQVVRISS 697 + L Y+ G ++ RS Y ++R L + + G S Sbjct: 666 QKRLVQFYQVGDYIQLQKKNYRSTPLQKDKLYRVER--RLGDELLVSSSGGRLYHFNPSK 723 Query: 698 LDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPAT 757 ++ + + VA G+ LR T + S GD ++V ++ + V+ T Sbjct: 724 YKHK-EVYEVQNLNVAVGDDLRWTHNNKEQKWSNGDEVKVVAIEGSTLHVIDEEGQH-RT 781 Query: 758 LPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNA-TLNGLARSGRDVRLYS 816 + + L + S V +S ++R ++ +Y Sbjct: 782 ISLDHPVCLDYALVH--TAHRAQGQSRKRVVISSTNDPTSSKEPFYVKISRQSHEIVIYC 839 Query: 817 SLDETRTAEKLARHPSFTVVSEQIKT 842 + E+++ + +E +K Sbjct: 840 Q-SFKKLDERVSESIAQDNATELLKD 864 Score = 360 bits (924), Expect = 3e-97, Method: Composition-based stats. Identities = 129/691 (18%), Positives = 253/691 (36%), Gaps = 86/691 (12%) Query: 796 AMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISH 855 ++ L + + L S + + + ++ + R + L + Sbjct: 244 QLEKDGLEATTANKQTACLKSRKAKEPGQKLTDLQAVWQQAAQTLDYRMPQPDLSPQFEY 303 Query: 856 QKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRG 915 + + T A+H A+ + + + F+ + F ++ ++A + Sbjct: 304 RPDQVTT----ALHSAINHLSERSITFTREQIEQFVFG-NIRQFRFEDISQAMSACEELL 358 Query: 916 DLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEK---LTSG 972 L T + A+ E E +I + G++ PLM + K L G Sbjct: 359 TLRDQVN----NTERFTTVAALEREAAIHQSWDLGRQTQTPLMSEYSVRELLKESGLNVG 414 Query: 973 QRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGE 1032 Q A L SD+F + G AGVGKT + + L + G PT +A Sbjct: 415 QLEAVAKTLAHSDQFILWHGLAGVGKTRTLGQLKQVLTHL----NLDIQGYAPTTKASKV 470 Query: 1033 M-RSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGG 1091 + + G+ T+A L + + L+++DE+ M+G+ M A Sbjct: 471 LGKELGIKTNTVAKLLVS--------KPSLAPHQLWIVDEAGMIGSQQMLELLGRARAAN 522 Query: 1092 GRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPEL-REAVYSLINRDVER 1150 R + GDT Q +I G P R R+ A + +IVRQ + + AV + Sbjct: 523 ARVLFVGDTKQNPSITAGSPMRSLI-RAGATTFHISQIVRQRNTVQKRAVSLIAKGQGLN 581 Query: 1151 ALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYE 1210 A+S L+ E + QE K + +Q + Sbjct: 582 AVSLLK---------------------EHGYIQEIKDEDIRQ-----------------Q 603 Query: 1211 AIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIR 1270 Y +PE R +TL+VT N++R + S++ + G LG+E + L + ++ Sbjct: 604 TFADYYLQLSPEERAETLLVTGTNKERLAIMSLLRQGLKAEGTLGEEDHHIQQLASRHLT 663 Query: 1271 DGELRRLSTWETHRDALVLVDNVY----------HRIAGISKDDGLITLQDAEGNTRLIS 1320 + R + ++ D + L Y +R+ + + + + G + Sbjct: 664 IEQKRLVQFYQVG-DYIQLQKKNYRSTPLQKDKLYRVE--RRLGDELLVSSSGGRLYHFN 720 Query: 1321 PREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQT 1380 P + + +Y + V GD +R+T +++E+ + V A+ G ++ + D + Sbjct: 721 P--SKYKHKEVYEVQNLNVAVGDDLRWTHNNKEQKWSNGDEVKVVAIEGSTLHVIDEEGQ 778 Query: 1381 REIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMK 1440 +D A TAH AQG S + + E YV +SR Sbjct: 779 HRTISLDHPVC--LDYALVHTAHRAQGQSRKRVVI----SSTNDPTSSKEPFYVKISRQS 832 Query: 1441 QHVQVYTDNRQGWTDAINNAVQKGTAHDVFE 1471 + +Y + + + ++ ++ + A ++ + Sbjct: 833 HEIVIYCQSFKKLDERVSESIAQDNATELLK 863 >UniRef50_C0A2R1 Conjugative relaxase domain protein n=2 Tax=Opitutaceae bacterium TAV2 RepID=C0A2R1_9BACT Length = 914 Score = 474 bits (1219), Expect = e-131, Method: Composition-based stats. Identities = 187/888 (21%), Positives = 335/888 (37%), Gaps = 83/888 (9%) Query: 9 SAGSAGNYYTDK---DNYYVLGSMGE-RWAGRGAEQLGLQGSVDKDVFTRLLEGRLPDGA 64 S A Y+ + +Y G E W G+GA L L G + F L GR P Sbjct: 13 SVAGAVEYFHEHMRLADYLKQGDQSEMTWVGQGAALLSLAGPCRVNDFETLCSGRHPATG 72 Query: 65 DLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEALASTR 124 + D +R R G+ S PK VS+ ++GGD R+ +AV ++++EA+ +TR Sbjct: 73 ESLLASDKGSRRRVGFFGQISPPKDVSIACLVGGDSRIAVWWTEAVRETLQEIEAVTATR 132 Query: 125 VMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDKVGKTG 184 V +GQ+ TGN+V A+ H+ +R +PQLHTH + N+T+ + K+ Sbjct: 133 VRCEGQNHDRTTGNMVAAVVTHEANRALDPQLHTHVCIMNLTRD-------HEENRWKSV 185 Query: 185 FIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPV---EAFSGRSQTI 241 Y +Q F + +L ++ + GYE E V G + + G P E FS R I Sbjct: 186 QPSAFYRHQGFFREVCYNRLAVRLRSAGYELERVRGIG-FTIKGFPEKLRETFSKRRLAI 244 Query: 242 REAVGEDASLKSR--DVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRA 299 EA + TR K A W+ +RA AD Sbjct: 245 LEAAAASGITSQDGLQAVTVRTRADKVSATAVELQAGWIAQAGPALDLVRAVIAQADG-- 302 Query: 300 DLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARA 359 TP PA + P A+ A + ER+ +L R I+ + + RA Sbjct: 303 -----TPKPAPEVRP--FDALVSAEEHVFERRSVV-DERLLLREALIIGRGHVTPDDLRA 354 Query: 360 GIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHP--EKSVPRTA 417 I E ++ +LI ++ G S + E + + V + + Sbjct: 355 AIGERVASGELI---KKGGDLASRSGLEAEDEFVTWAEAHREDCGVIGYAVGLREASLGK 411 Query: 418 GYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMK 477 + AVS + R + + G G G+ + +V +G + A + ++ Sbjct: 412 DQAAAVSTVLASRSRVTVFQGDAG-TGKTHSLKTVVAAIERRGGRIFGCAPSTGATDVLR 470 Query: 478 QDERLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDS 537 ++ + E A G +IVD+ +S+++ L A ++ ++L+ Sbjct: 471 KELTPDANTLQQLLANPELQAAMRGRVIIVDEAGLMSVRQMRDLCRLADANDYRLLLVGD 530 Query: 538 GQRTG---TGSALMAMKD------AGVNTYRWQGGEQRPATIISEPDRNV-----RYARL 583 ++ G G AL ++ A + R Q + + D NV R+ +L Sbjct: 531 TKQHGSVEAGDALRCLQKFANVPVARLTQIRRQKDPEFREAVADLADGNVVSAVARFRKL 590 Query: 584 ----------------AGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLP 627 A D+ ++V++G+ + E T +R +L+ G+L P Sbjct: 591 EAVKEIPYDRQLYSAAAKDYISTVRSGKTCLVISPVWSEIHAFTTEVRRQLRCNGLLSGP 650 Query: 628 EVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETR--SHDRYVIDRVTAQSHSLTLRD 685 + +T + R + Y+PG ++ E S + + R+ + L + Sbjct: 651 DRVVTVAWSLDWTREWRRQIENYKPGDLLRFHRDEGDFGSGEYATVSRI--EDRCLVVTR 708 Query: 686 AQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAM 745 G + + + ++ VA G+ L V + GDR++VA ++ Sbjct: 709 HDGNRTWIDPRQTG-GFDVQVAGELSVAAGDSLLVEANEKSAGLKNGDRVEVAGFDDEGS 767 Query: 746 TVVVPGRAEPATLPVSDSPFTALKLENGWVETP----GHSVSDSATVFASVTQMAMD-NA 800 V+ GR P++ + +G+ T G +V+ V A + + Sbjct: 768 IVLKDGRLIPSSF---------RQFTHGYASTSHGSQGKTVNRGILVMADESIATANLKQ 818 Query: 801 TLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETS 848 +R +Y++ D E + R + SE + A + + Sbjct: 819 AYVSNSRFQETQMIYTT-DIDAAREAMGRFGDRLLASELVPPDARKPA 865 Score = 342 bits (877), Expect = 8e-92, Method: Composition-based stats. Identities = 134/625 (21%), Positives = 229/625 (36%), Gaps = 80/625 (12%) Query: 867 AIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGY 926 A+ A V ++ LL EA +L I ++ G+L+ Sbjct: 315 ALVSAEEHVFERRSVVDERLLLREALIIGRGHVTPDDLRAAIGERVASGELI-------K 367 Query: 927 GTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDR 986 G L SR+ EAE + +E + V G L Q AA +L + R Sbjct: 368 KGGDLASRSGLEAEDEFVTWAEAHREDCGVIGYAV-GLREASLGKDQAAAVSTVLASRSR 426 Query: 987 FTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVD-AQTLAS 1045 TV QG AG GKT + V++A+ E R+ G P+ A +R A TL Sbjct: 427 VTVFQGDAGTGKTHSLKTVVAAI----ERRGGRIFGCAPSTGATDVLRKELTPDANTLQQ 482 Query: 1046 FLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQA 1105 L + +LQ + ++DE+ ++ M L A R + GDT Q + Sbjct: 483 LLANPELQAA------MRGRVIIVDEAGLMSVRQMRDLCRLADANDYRLLLVGDTKQHGS 536 Query: 1106 IAPGQPFRLQQTRSAADVAIMKEIVRQT-PELREAVYSLINRDVERALSGLESVKPSQVP 1164 + G R Q + VA + +I RQ PE REAV L + +V A++ ++ Sbjct: 537 VEAGDALRCLQKFANVPVARLTQIRRQKDPEFREAVADLADGNVVSAVARFRKLEA---- 592 Query: 1165 RQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAR 1224 V E + ++ LY A +DY T + Sbjct: 593 -----------VKEIPYDRQ-----------------------LYSAAAKDYIS-TVRSG 617 Query: 1225 EQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWET-- 1282 + L+++ + + + + G L +V V + + R++ ++ Sbjct: 618 KTCLVISPVWSEIHAFTTEVRRQLRCNGLLSGPDRVVTVAWSLDWTREWRRQIENYKPGD 677 Query: 1283 ----HRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIR 1338 HRD Y ++ I +D + + +GN I PR+ V + + Sbjct: 678 LLRFHRDEGDFGSGEYATVSRI--EDRCLVVTRHDGNRTWIDPRQTGGFDVQV--AGELS 733 Query: 1339 VGTGDRMRFTKSDRERGYVANSVWTVTAVSGD-SVTLSDGQQTREIRPGQEQAEQHIDLA 1397 V GD + +++ G V + S+ L DG+ + + Sbjct: 734 VAAGDSLLVEANEKSAGLKNGDRVEVAGFDDEGSIVLKDGRLI-------PSSFRQFTHG 786 Query: 1398 YAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAI 1457 YA T+HG+QG + I + E A + AYV+ SR ++ +YT + +A+ Sbjct: 787 YASTSHGSQGKTVNRGILVMADES--IATANLKQAYVSNSRFQETQMIYTTDIDAAREAM 844 Query: 1458 NNAVQKGTAHDVFEPKPDREVMNAE 1482 + A ++ P R+ A Sbjct: 845 GRFGDRLLASELVPP-DARKPAGAR 868 >UniRef50_Q5WRX6 Putative uncharacterized protein n=1 Tax=Legionella pneumophila str. Lens RepID=Q5WRX6_LEGPL Length = 982 Score = 471 bits (1211), Expect = e-130, Method: Composition-based stats. Identities = 202/945 (21%), Positives = 363/945 (38%), Gaps = 96/945 (10%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRL 60 M+S+ ++SA A +YY+ NYY + +W G+G+++L L G V K+ LLEGRL Sbjct: 1 MLSVEPLKSAQGAADYYSKAFNYYSGDATAMQWLGQGSQKLKLSGVVQKEQMLALLEGRL 60 Query: 61 PDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEA- 119 PDG L Q+ HRPG+D+TFSAPKSVS++ LG L+ H++AV +RQ+E Sbjct: 61 PDGQVL---QNLEGEHRPGFDMTFSAPKSVSVLVGLGLAPELVRFHDEAVQLTIRQIEKE 117 Query: 120 LASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDK 179 A TRV G+ T NL++A F +SR +P LHTH V N+T H G+ ++LSSD Sbjct: 118 FAETRVSRRGEISFEKTNNLLVAAFRQPSSRANDPALHTHCVTMNITFHEGKARSLSSDP 177 Query: 180 VGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVE---AFSG 236 + G IE + N G +YR+ L +++ G+ + GK G++E+ GVP E FS Sbjct: 178 SREHGVIEQIQNNAHYCGLIYRQHLANKLKETGFHLRLTGK-GLFEIDGVPDEVLHEFST 236 Query: 237 RSQTIREAVGEDA--SLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDA 294 R I + E KS A + TRK+K+ D + +W Q K+ GFD +A+ Sbjct: 237 RRMDILGYMDEKGWNGAKSASTATVLTRKNKEEHDINLLTEDWKQRAKDIGFDAQAFMQH 296 Query: 295 ADQRADLRTLT-------------PGPASQDGPDVQQA-VTQAIAGLSERKVQFTYTDVL 340 D+ + L+ +S + A V AI LS+R F+ + Sbjct: 297 RDKSQSISWLSGVKDRLLALVNKYKKDSSPSEIEAAHACVVVAIETLSQRTSIFSERMLT 356 Query: 341 ARTV--GILPPENGVIERARAGIDEAISREQLIPL---DREKGLFTSGIHVLDELSVRAL 395 + ++ P+ + I + I + L DR + L T+ + E A Sbjct: 357 QEAMKHSLIYPKAVSRQSIIESIQQEIKSQTLYEARCFDRGERLLTTPWLLTLETETIAR 416 Query: 396 SRDIMKQNRVTVH------------PEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAA 443 H P T +++ VL + + G G A Sbjct: 417 IDRNKGAVPAIAHLNAVTAFQKMRSSLLPYPMTNSQKESMKVLLTSKDRYLAIQGYAGVA 476 Query: 444 GQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTP-- 501 + ++E + QG +++ I + +++ + ++ Q L+ Sbjct: 477 -KTSMLSEARIFIEAQGHKLRGITVASSAAHELQEKAGIKADVFPLVHQELKEAQTASLT 535 Query: 502 GSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSA---LMAMKDAGVNTY 558 + I+D+ LS + L+ R ++++ + + +A ++ G+ T Sbjct: 536 KTLFIIDEASMLSSHQGHELMKQIERVGARLVLVGDRAQLPSVNAGRIFGLTQEYGIETA 595 Query: 559 RWQGGEQRPATIISE----------------------PDRNVRYARLAGDFAASVKAGEE 596 ++ I+ + R A +A + + + + Sbjct: 596 VMDEVVRQKNEILRQAVIATTKGFVQEALDNLDVKTLATHKERIAWIANHWLSLSASARD 655 Query: 597 SVAQ-VSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMV 655 + +T IRS LK +G L + + L ++ Y+ G + Sbjct: 656 ETLLFAPTHANREEITTFIRSGLKQEGTLKGEQFSQIILKTKMMEPIQSRFVAYYQKGDM 715 Query: 656 MEQWNPETRSH----DRYVIDRV---TAQSHSLTLRDAQGETQVVRIS----------SL 698 + R+ Y + + Q + L L D G ++ Sbjct: 716 VRFNQSFKRNKIHAGSYYTVGEISKKHRQDNVLPLIDESGNLIKFNLNNLPNYKTHTAPF 775 Query: 699 DSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATL 758 + + ++ + + + G+++ T + G + + ++ + E L Sbjct: 776 ERTIEVYETKSLELLVGDKVMWTRNFKANDIRNGQCATLHEIKNNSFMFI---TKEGRLL 832 Query: 759 PVSDSPFTALKLENGWVET----PGHSVSDSATVFASVTQMAMD-NATLNGLARSGRDVR 813 + S L+ +V T G + S + N ++R+ + Sbjct: 833 TLEKSHPALKHLDYSYVLTNYKVQGKDAPYGIGLMESFHRFGSTLNNFYVQISRAIHGMT 892 Query: 814 LYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKS 858 L + E + R+ + S I + A E Q Sbjct: 893 LVTDNKEELVHA-IRRNSNEKPASMDITSSAQLIHHERRFGAQNQ 936 Score = 368 bits (944), Expect = 1e-99, Method: Composition-based stats. Identities = 150/785 (19%), Positives = 276/785 (35%), Gaps = 104/785 (13%) Query: 750 PGRAEPATLPVSDSPFTALKL--ENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLAR 807 G + S L E GW S +ATV + D L + Sbjct: 224 DGVPDEVLHEFSTRRMDILGYMDEKGWNGAKSAS---TATVLTRKNKEEHDINLLTEDWK 280 Query: 808 SGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQA 867 + + +S + +L S A A Sbjct: 281 QRAKDIGF------DAQAFMQHRDKSQSISWLSGVKDRLLALVNKYKKDSSPSEIEAAHA 334 Query: 868 -IHLALPVVESKKLAFSMVDLLTEAKSFA---AEGTGFTELGGEINAQIKRGDLLYVDVA 923 + +A+ + + FS L EA + + + I +IK L Sbjct: 335 CVVVAIETLSQRTSIFSERMLTQEAMKHSLIYPKAVSRQSIIESIQQEIKSQTLYEARCF 394 Query: 924 KGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKL---------TSGQR 974 G LL + E + I K AV + +K+ T+ Q+ Sbjct: 395 DR-GERLLTTPWLLTLETETIARIDRNKGAVPAIAHLNAVTAFQKMRSSLLPYPMTNSQK 453 Query: 975 AATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMR 1034 + +++L + DR+ +QGYAGV KT+ + E++ ++ G+ A E++ Sbjct: 454 ESMKVLLTSKDRYLAIQGYAGVAKTSMLSE----ARIFIEAQGHKLRGITVASSAAHELQ 509 Query: 1035 S-AGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGR 1093 AG+ A + + +T + TLF++DE+SM+ + I G R Sbjct: 510 EKAGIKAD----VFPLVHQELKEAQTASLTKTLFIIDEASMLSSHQGHELMKQIERVGAR 565 Query: 1094 AVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPE-LREAVYSLINRDVERAL 1152 V GD QL ++ G+ F L Q + A+M E+VRQ E LR+AV + V+ AL Sbjct: 566 LVLVGDRAQLPSVNAGRIFGLTQEY-GIETAVMDEVVRQKNEILRQAVIATTKGFVQEAL 624 Query: 1153 SGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAI 1212 L+ VK ++ AW I Sbjct: 625 DNLD-VKTLATHKERIAW-----------------------------------------I 642 Query: 1213 VRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDG 1272 + + AR++TL+ + +R + + I ++ G L EQ +L T + Sbjct: 643 ANHWLSLSASARDETLLFAPTHANREEITTFIRSGLKQEGTLKGEQFSQIILKTKMMEPI 702 Query: 1273 ELRRLSTWETHR--------DALVLVDNVYHRIAGISKD---DGLITLQDAEGNTRLIS- 1320 + R ++ ++ + Y+ + ISK D ++ L D GN + Sbjct: 703 QSRFVAYYQKGDMVRFNQSFKRNKIHAGSYYTVGEISKKHRQDNVLPLIDESGNLIKFNL 762 Query: 1321 ---PREAVA-----EGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSV 1372 P + +Y ++ + GD++ +T++ + T+ + +S Sbjct: 763 NNLPNYKTHTAPFERTIEVYETKSLELLVGDKVMWTRNFKANDIRNGQCATLHEIKNNSF 822 Query: 1373 TLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESA 1432 + A +H+D +Y +T + QG + I L E + + + Sbjct: 823 MFITKEGRLLTLEKSHPALKHLDYSYVLTNYKVQGKDAPYGIGLM--ESFHRFGSTLNNF 880 Query: 1433 YVALSRMKQHVQVYTDNRQGWTDAINN-AVQKGTAHDVFEPKPDREVMNAERLFSTAREL 1491 YV +SR + + TDN++ AI + +K + D+ ++++ ER F +L Sbjct: 881 YVQISRAIHGMTLVTDNKEELVHAIRRNSNEKPASMDI---TSSAQLIHHERRFGAQNQL 937 Query: 1492 RDVAA 1496 + Sbjct: 938 SIQSV 942 >UniRef50_C7PJH8 Conjugative relaxase domain protein n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PJH8_CHIPD Length = 870 Score = 471 bits (1211), Expect = e-130, Method: Composition-based stats. Identities = 178/908 (19%), Positives = 334/908 (36%), Gaps = 111/908 (12%) Query: 1 MMSIAQVRSAGSAGNYYTD---KDNYYVLG-SMGERWAGRGAEQLGLQGSVDKDVFTRLL 56 M+ + Q RSA A +Y+ D K +YY+ + + GR A+++G+ G DK +F L Sbjct: 1 MLRMTQSRSAEQAKDYHNDALLKSDYYLNDQELRGSFNGRLAKRIGINGPTDKFIFDALC 60 Query: 57 EGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQ 116 E P + R GYDLTF PKSVS++ + ++ AV +R Sbjct: 61 ENINPITLKPLTSRKSKVRT-VGYDLTFCCPKSVSLLHAFAKNDSILTVFRNAVHRTMRD 119 Query: 117 VEALASTRVMTDGQSETVLTGNLVMALFNHDTSRD-----QEPQLHTHAVVANVTQHNGE 171 +E TRV G+ E +T L+ A F H TSR +P LH H N T Sbjct: 120 IEKDVQTRVRKKGKDENRITSELLYADFVHQTSRAVNREMPDPFLHCHCYTFNATYDP-- 177 Query: 172 WKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP- 230 +K K + + + L+ ++L + + LGY+ +E+ GV Sbjct: 178 -----IEKQFKAVQFRDTMRDLPYYEALFHKRLADGLMKLGYKIRPT--KSSFEVVGVDP 230 Query: 231 --VEAFSGRSQTIREAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDI 288 + FS R+ I + E ++++ + R + K+ G + Sbjct: 231 KLIRLFSKRTNEIEQIAKEKNITDAKELDKIGARSRAK---------------KQKGLSM 275 Query: 289 RAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIA----------GLSERKVQFTYTD 338 R D ++TL + VQ++ + A+ ER Sbjct: 276 DDLR--TDWERQIKTLNLPSVNTSIVSVQESTSNALTADECIDHSLLHHFERNSVVQDRK 333 Query: 339 VLARTVGILPPE-NGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELS-VRALS 396 +LA+ E N I + +I + ++ + + VL E + + L+ Sbjct: 334 ILAKAYKFGIDEKNVSITQINTAFK---KHPNIINVKQDNRVLCTLDSVLREETRMVKLA 390 Query: 397 RDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMA 456 D ++ A + + ++I+ G G G+ + E V M Sbjct: 391 HDGKDTFAPLYISAPTLSLKGEQGRAARHVLTTKDKVSIIMGGAG-TGKTILMQETVSMI 449 Query: 457 REQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLL-EGMAFTPGSTVIVDQGEKLSL 515 + G++V ++A ++ ++ + E + + E + + VD+ L Sbjct: 450 EKTGKKVIVVAPTAKASRDVLKKEGFADAQTVAKLLASPELQKYLQDQILWVDESGLLGT 509 Query: 516 KETLTLLDGAARHNVQVLITDSGQRTGT---GSALMAMKDAGV------NTYRWQGGEQR 566 K+ LL+ A N +V+++ ++ G +L + DAG+ +R + R Sbjct: 510 KDMTALLELATTFNTRVILSGDVRQHAAVAYGDSLRILMDAGIVPVTVNKIHRQRKQPYR 569 Query: 567 PATI-------------------ISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQ 607 A I D N YA L D+ ++ G+ + + Sbjct: 570 DAVYDLSKGHVMAAFGKMERMGAIKTCDEN--YASLTNDYMTAIGQGKTVLVVSPTHAQG 627 Query: 608 AILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHD 667 +T+AIR L+ G L E T L + L + + G ++ Q+N + Sbjct: 628 ETVTKAIRQTLRHAGKLHGKEKPFTRLVNLNLTEAEKADSRYFDSGQIL-QFNQNCKGIT 686 Query: 668 R-YVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKI-- 724 + + + L ++D +G+ ++ L + ++R EK+ + G+ + VT Sbjct: 687 HGTTLSIMQVEGKCLVMKDEKGKNVTASLNDLK-GFEVYRKEKIDLLKGDVITVTRNGVD 745 Query: 725 -PGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSV- 782 ++ G L+V S ++ + P TLP L + T S Sbjct: 746 KKKQSLNNGQVLEVVSTAKGDIIARHPDTKALYTLPQQFG-----HLAYAYCVTSHASQG 800 Query: 783 --------SDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFT 834 S A+ FA+ + +R + +Y+ E +++++ Sbjct: 801 MTVDEVFISQPASTFAAASMQ----QFYVSASRGRDCLHVYTDNKE-ALLDRISQSGERM 855 Query: 835 VVSEQIKT 842 E IK+ Sbjct: 856 SALELIKS 863 Score = 329 bits (843), Expect = 7e-88, Method: Composition-based stats. Identities = 131/683 (19%), Positives = 245/683 (35%), Gaps = 81/683 (11%) Query: 809 GRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTP--AQQ 866 +++ + + + L+ T QIKT S+ T+I + + A + Sbjct: 255 AKELDKIGARSRAKKQKGLSMDDLRTDWERQIKTL-NLPSVNTSIVSVQESTSNALTADE 313 Query: 867 AIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGY 926 I +L + +L +A F + + IN K+ + K Sbjct: 314 CIDHSLLHHFERNSVVQDRKILAKAYKFGIDEKNVSITQ--INTAFKKHPNII--NVKQD 369 Query: 927 GTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDR 986 L + E +++ +GK+ PL P L Q A R +L T D+ Sbjct: 370 NRVLCTLDSVLREETRMVKLAHDGKDTFAPLYISAPTL---SLKGEQGRAARHVLTTKDK 426 Query: 987 FTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAV-GEMRSAGV-DAQTLA 1044 +++ G AG GKT + +S + E +V+ + PT +A ++ G DAQT+A Sbjct: 427 VSIIMGGAGTGKTILMQETVSMI----EKTGKKVIVVAPTAKASRDVLKKEGFADAQTVA 482 Query: 1045 SFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQ 1104 L +LQ+ + + +DES ++G DM L R + SGD Q Sbjct: 483 KLLASPELQKY------LQDQILWVDESGLLGTKDMTALLELATTFNTRVILSGDVRQHA 536 Query: 1105 AIAPGQPFRLQQTRSAADVAIMKEIVRQTPE-LREAVYSLINRDVERALSGLESVKPSQV 1163 A+A G R+ V + K I RQ + R+AVY L V A +E + + Sbjct: 537 AVAYGDSLRILMDAGIVPVTVNK-IHRQRKQPYRDAVYDLSKGHVMAAFGKMERMGAIKT 595 Query: 1164 PRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEA 1223 + Y ++ DY + Sbjct: 596 CDEN-----------------------------------------YASLTNDYMTAIGQG 614 Query: 1224 REQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETH 1283 + L+V+ + + I AG+L ++ L N+ + E +++ Sbjct: 615 K-TVLVVSPTHAQGETVTKAIRQTLRHAGKLHGKEKPFTRLVNLNLTEAEKADSRYFDSG 673 Query: 1284 RDALVLVDNVYHRIAG-----ISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIR 1338 + L N G + + + ++D +G S +G +Y + I Sbjct: 674 Q-ILQFNQNCKGITHGTTLSIMQVEGKCLVMKDEKGKNVTASL--NDLKGFEVYRKEKID 730 Query: 1339 VGTGDRMRFTKS---DRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHID 1395 + GD + T++ +++ V V + + + Q H+ Sbjct: 731 LLKGDVITVTRNGVDKKKQSLNNGQVLEVVSTAKGDIIARHPDTKALY--TLPQQFGHLA 788 Query: 1396 LAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTD 1455 AY +T+H +QG + + A + YV+ SR + + VYTDN++ D Sbjct: 789 YAYCVTSHASQGMTVDEVF--ISQPASTFAAASMQQFYVSASRGRDCLHVYTDNKEALLD 846 Query: 1456 AINNAVQKGTAHDVFEPKPDREV 1478 I+ + ++ +A ++ + P Sbjct: 847 RISQSGERMSALELIKSFPSFTP 869 >UniRef50_A8ZNG7 Putative uncharacterized protein n=2 Tax=Acaryochloris marina MBIC11017 RepID=A8ZNG7_ACAM1 Length = 1344 Score = 470 bits (1209), Expect = e-130, Method: Composition-based stats. Identities = 185/889 (20%), Positives = 340/889 (38%), Gaps = 118/889 (13%) Query: 1 MMSIAQVRSAGSA-GNYYTD-------KDNYYVLGS----MGERWAGRGAEQLGLQGSVD 48 M + +A YYT+ +D YY G +W G GA+ L L+G ++ Sbjct: 1 MFRPTLINKGNAAIEEYYTEDEALKNSEDEYYAPGKDPVVSPCKWYGNGADSLNLKGVIN 60 Query: 49 KDVFTRLLEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQ 108 + VF +L G P R + + + R G DLTF K S++A++GGD+R+I+ H Q Sbjct: 61 QKVFKKLFYGHHPQTGKRLRKKPTNGQERLGIDLTFGPGKEASILALVGGDRRIIELHEQ 120 Query: 109 AVDFAVRQVE-ALASTRVM-TDGQSETVLTGNLVMALFNHDTSRDQ--------EPQLHT 158 A+ + TRV +GQ V T +L+ A NH T+R +P LHT Sbjct: 121 ALQKVFDIFQSRYTQTRVRHGNGQRSLVNTNSLIGAFINHATARPVTIDGKTYSDPALHT 180 Query: 159 HAVVANVTQHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVV 218 H VV N TQ NG+W++LS++ + K+ ++ G +YR + + + LGY Sbjct: 181 HIVVMNATQINGKWQSLSNEAIFKS----------LSLGSIYRHFIDKGLAELGYTVRPD 230 Query: 219 GKHGMWEMPGVPVE---AFSGRSQTIREAV---GEDASLKSRDVAALDTRKSKQH-VDPE 271 G + G+ E F R+Q + + G + + ++R A L TR K+ + Sbjct: 231 GT-----IEGLSPETVWHFKKRTQEVERYLKKYGLEDTQENRQNAVLRTRNKKEDNTNIP 285 Query: 272 IKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERK 331 KM W++ L GF + + ++ V AIA L ER Sbjct: 286 EKMKGWVEELIINGFTLP------------KPAKKSTWVHRPELTREYVDSAIAHLQERN 333 Query: 332 VQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELS 391 +F + + PP E + I QLI + +T+ + E Sbjct: 334 AEFCHELIEQWVFDQRPP--FTYEELQTEIAN---HPQLI--RTKNDTYTTQYALDREEK 386 Query: 392 VRALSRDIMKQ--NRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERV 449 R L + T E + A +AV L I G G G+ + Sbjct: 387 TRQLWAAGQHKFTPITTGKIEFNKMLNADQRNAVRNTLASSNRLIIWHGLSG-VGKTTTL 445 Query: 450 AELVMMAREQGREVQ--IIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGSTVIV 507 +EL ++Q + ++ + ++ + ++G + + +P I+ Sbjct: 446 SELQKHIEAINPDIQIKGYSPTTKAAGVLAEELGIETTTVSG--LITRKLDTSPNQWWII 503 Query: 508 DQGEKLSLKETLTLLDGAARHNVQVLIT---DSGQRTGTGSALMAMKDAGVNTYRWQG-- 562 D+ S ++ L +L A N +VL+ + GS ++ AG TY + Sbjct: 504 DEAGMKSAEQGLEVLKRAEAVNARVLLVGDINQNSSVNAGSPQRSLMKAGAETYHIKTIL 563 Query: 563 -----GEQRPATIISEP-------------------DRNVRYARLAGDFAASVKAGEESV 598 ++R ++S D R A++A + + + Sbjct: 564 RQKRIVQRRAVELVSIGKPLEALKLLNEYGHVTEVADHRTRAAQVAEKYLSLKPKERKQT 623 Query: 599 AQVSGV-REQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVM- 656 V+G RE+ +T IR L+ +GV+ + + L L + Y+ + Sbjct: 624 LIVTGTHRERKAITILIREGLRAEGVIKGEDQALRQLVDKRLTTEQTRHLRYYKTDDYVI 683 Query: 657 --EQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVAD 714 E ++ + Y + V S + + G+ + L++ ++F +K+ VA Sbjct: 684 PNENFSSRLQKGKLYKVVGVDEASGVVRVVSQGGQYSSFDPAKLENK-TVFTAQKINVAV 742 Query: 715 GERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGW 774 G++LR T L + GD+ +V +V + + + + L+L+ Sbjct: 743 GDQLRWTRN--NLHGNNGDQFKVTAVEGHRIQINHKKWIDTS---------KPLELDYSI 791 Query: 775 VETPGHSVSDSATVFA---SVTQMAMDNATLNGLARSGRDVRLYSSLDE 820 T + + ++ + ++R ++ +++ E Sbjct: 792 TSTTHAAQGQTYYRVIFSGTIDPTSSREPFYVAISRQKHELYIFTENYE 840 Score = 364 bits (933), Expect = 2e-98, Method: Composition-based stats. Identities = 114/616 (18%), Positives = 227/616 (36%), Gaps = 83/616 (13%) Query: 864 AQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVA 923 ++ + A+ ++ + F +L+ + + EL EI Sbjct: 318 TREYVDSAIAHLQERNAEFCH-ELIEQWVFDQRPPFTYEELQTEIAN---------HPQL 367 Query: 924 KGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILET 983 ++ + + E+ + G+ P+ E + L + QR A R L + Sbjct: 368 IRTKNDTYTTQYALDREEKTRQLWAAGQHKFTPITTGKI-EFNKMLNADQRNAVRNTLAS 426 Query: 984 SDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM-RSAGVDAQT 1042 S+R + G +GVGKTT + + + + ++ G PT +A G + G++ T Sbjct: 427 SNRLIIWHGLSGVGKTTTLSELQKHIEAI--NPDIQIKGYSPTTKAAGVLAEELGIETTT 484 Query: 1043 LASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQ 1102 ++ + + N +++DE+ M A R + GD +Q Sbjct: 485 VSGLITR--------KLDTSPNQWWIIDEAGMKSAEQGLEVLKRAEAVNARVLLVGDINQ 536 Query: 1103 LQAIAPGQPFRLQQTRSAADVAIMKEIVRQTP-ELREAVYSLINRDVERALSGLESVKPS 1161 ++ G P R ++ A+ +K I+RQ R AV + AL L Sbjct: 537 NSSVNAGSPQRSLM-KAGAETYHIKTILRQKRIVQRRAVELVSIGKPLEALKLLN----- 590 Query: 1162 QVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTP 1221 + ++A+ + +A + Y P Sbjct: 591 ------------------EYGHVTEVADHRTRA---------------AQVAEKYLSLKP 617 Query: 1222 EAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWE 1281 + R+QTLIVT + +R+ + +I + G + E + L + + R L ++ Sbjct: 618 KERKQTLIVTGTHRERKAITILIREGLRAEGVIKGEDQALRQLVDKRLTTEQTRHLRYYK 677 Query: 1282 THRDAL-------VLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTP 1334 T + L +++ G+ + G++ + G P A E T++T Sbjct: 678 TDDYVIPNENFSSRLQKGKLYKVVGVDEASGVVRVVSQGGQYSSFDP--AKLENKTVFTA 735 Query: 1335 DTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHI 1394 I V GD++R+T+++ + VTAV G + ++ + +P + + Sbjct: 736 QKINVAVGDQLRWTRNNLHGN--NGDQFKVTAVEGHRIQINHKKWIDTSKPLE------L 787 Query: 1395 DLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWT 1454 D + T H AQG + I G + E YVA+SR K + ++T+N +G Sbjct: 788 DYSITSTTHAAQGQTYYRVIF----SGTIDPTSSREPFYVAISRQKHELYIFTENYEGMC 843 Query: 1455 DAINNAVQKGTAHDVF 1470 + + + ++ Sbjct: 844 RQVQCSAAQLNPRELL 859 >UniRef50_Q5ZTT4 TraI n=1 Tax=Legionella pneumophila subsp. pneumophila str. Philadelphia 1 RepID=Q5ZTT4_LEGPH Length = 1981 Score = 465 bits (1196), Expect = e-129, Method: Composition-based stats. Identities = 214/1084 (19%), Positives = 407/1084 (37%), Gaps = 100/1084 (9%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQG-SVDKDVFTRLLEGR 59 M+S+ + SA A YY D NYY S RW G GA+ LG+ G +V+K+ LL+G Sbjct: 1 MLSLQPLDSADGAAAYYLDVVNYYENDSKSVRWLGDGAKILGIHGQAVEKEQMIALLKGI 60 Query: 60 LPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEA 119 LPDG L R+ HRPG+D+T +APKS S++ G D RL + ++AV++ V ++E Sbjct: 61 LPDGTQLGRIDKDGIHHRPGFDMTLTAPKSFSILLESGADPRLGEVFDKAVEWFVEEMEK 120 Query: 120 -LASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH-NGEWKTLSS 177 A R + DG+ E + T NLV+A F +SR +P HTH VV N+T +G+W++L+S Sbjct: 121 EFAQARQLVDGKIEYIDTRNLVIAAFRQPSSRANDPNSHTHLVVQNMTHCPDGKWRSLAS 180 Query: 178 DKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVE---AF 234 D G+ G +E + + I G +R KL + LGY+ G G+WE+ G P + F Sbjct: 181 DMDGQKGVVEQIMKHHIYGGLKFRNKLANLTKELGYQLASDG-DGLWEIQGAPEQVLTHF 239 Query: 235 SGRSQTIREAVGEDA--SLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYR 292 S R ++I + E K+ +AA T+ K+ +D E + ++ +E GFD Sbjct: 240 SKRRESIEALLDEKGWSGAKASSIAAQKTKLDKEIIDYEKWKEDIIKECQEMGFDPHQLV 299 Query: 293 DAA--DQRADLRTLTP-------GPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLART 343 ++ Q+ +TL G + + +++V AI +S++ F ++ Sbjct: 300 ASSYKPQKNLFQTLKENIVERFYGKDNIEMTHARESVYVAIESISQQHAVFEERELKKEA 359 Query: 344 VGILPPENGVIER--ARAGIDEAISREQLIPLDR---EKGLFTSGIHVLDELSVRALSRD 398 + + N +I+ IDE I+ + L +K L T+ + E + Sbjct: 360 LKYVIASNKIIDETLINKAIDENIANQNLYTARHPFTQKPLLTTPWQLTLESEAIQRIEN 419 Query: 399 IMKQNRVT------------VHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQR 446 E + + A++ + G G G+ Sbjct: 420 GKGAVSAICSKQKVSEFIKAKEQEMAFALSPSQKKAMTTFLTSTDRFIAIQGYAG-TGKT 478 Query: 447 ERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGSTV- 505 + +A QG E++ I A + ++ L+ L+ T+ Sbjct: 479 TMLRLTRELASLQGYEIRGITAGSAAANELRHKGGLNASTFARELGRLQNQKQDLSKTIF 538 Query: 506 IVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRT---GTGSALMAMKDAGVNT----- 557 +VD+ LS + ++ A + N Q+ I + +G ++D G+ T Sbjct: 539 VVDEASMLSNPQGHKIIKLAEQFNTQLKIIGDKAQLPSPSSGKLFSVIQDYGIKTVAMTD 598 Query: 558 -YRWQGGEQRPATII-------SEPDRNV----------RYARLAGDFAASVKAGEESVA 599 R + E R + I D+ R ++ + + ++ Sbjct: 599 NLRQKDSELRESAIHAGRGEIYDAVDKLTHVETLDTYLKRVDYISSKWLSLTPEERQNTL 658 Query: 600 -QVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQ 658 R + +TQ +R+ L +G L E L L Y ++ Sbjct: 659 CFAPTHRNRQDITQILRNALIQEGTLTGQEHLQPILKERNLTGIKLRNAAYYSQNDIIRF 718 Query: 659 WNPETRS----HDRYVIDRV---TAQSHSLTLRDAQGETQVVRISSLDS----------S 701 + R D + +V +++L L+ G+ ++SSL Sbjct: 719 NHTIQRYNIKAGDYLTVGQVTNKNKHNNTLILKHENGQAIKFKLSSLPEFRTENKDLERP 778 Query: 702 WSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVS 761 ++R E++ + G++++ + + + ++ + +T++ TL + Sbjct: 779 VEVYRREQLSLMAGDQIQWKRNSEHNGIRNSELATIRQINNEGITIITEDNQ---TLHLP 835 Query: 762 DSPFTALKLENGWV----ETPGHSVSDSATVFASVTQMAMD-NATLNGLARSGRDVRLYS 816 L++G+V T G + S + A R ++ + + Sbjct: 836 HGAKELRHLDHGYVLTTYATQGKDKKRGLGLIESQNRFASTIQNYYVETTRGIWEMIVVT 895 Query: 817 SLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPA------QQAIHL 870 + + + + + + H+ S + A ++ Sbjct: 896 DDKDHLVKAITTNNSDKYSSMDMVDSDTLKAHEARFKEHKNSIVLQNAIEKKLSKEQDWK 955 Query: 871 ALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGL 930 L + +A A +L ++ G Y A + T Sbjct: 956 GLEQTVETYVQCKQQGEDRKAAKLAFAIVNDPKLYRLAKERLGFGVSTYRREALRFQTSK 1015 Query: 931 LVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSG---Q-RAATRMILETSDR 986 L+ + ++E+ + + +++R + L +G Q + A + + Sbjct: 1016 LL-HSLPKSERQDFSTVRQYVFLNQQILKRSQHINAQSLDNGISNQNKQALQQQSAKRNA 1074 Query: 987 FTVV 990 V Sbjct: 1075 VAFV 1078 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 127/682 (18%), Positives = 254/682 (37%), Gaps = 88/682 (12%) Query: 861 HTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTE---LGGEINAQIKRGDL 917 T A++++++A+ + + F +L EA + + + I+ I +L Sbjct: 329 MTHARESVYVAIESISQQHAVFEERELKKEALKYVIASNKIIDETLINKAIDENIANQNL 388 Query: 918 LYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLME---------RVPGELMEK 968 LL + E ++ I GK AV + E+ Sbjct: 389 YTARHPFTQ-KPLLTTPWQLTLESEAIQRIENGKGAVSAICSKQKVSEFIKAKEQEMAFA 447 Query: 969 LTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHR 1028 L+ Q+ A L ++DRF +QGYAG GKTT R ++ + + G+ Sbjct: 448 LSPSQKKAMTTFLTSTDRFIAIQGYAGTGKTTMLRLTRELASL----QGYEIRGITAGSA 503 Query: 1029 AVGEMR-SAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALI 1087 A E+R G++A T A L Q Q++ D S T+F++DE+SM+ N + L Sbjct: 504 AANELRHKGGLNASTFARELGRLQNQKQ-----DLSKTIFVVDEASMLSNPQGHKIIKLA 558 Query: 1088 AAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRD 1147 + GD QL + + G+ F + Q VA+ + ++ ELRE+ + Sbjct: 559 EQFNTQLKIIGDKAQLPSPSSGKLFSVIQDYGIKTVAMTDNLRQKDSELRESAIHAGRGE 618 Query: 1148 VERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMT 1207 + A+ L V+ D + Sbjct: 619 IYDAVDKLTHVET-----------------------------------------LDTYLK 637 Query: 1208 LYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTA 1267 + I + TPE R+ TL + +R+ + ++ + + G L ++ + P+L Sbjct: 638 RVDYISSKWLSLTPEERQNTLCFAPTHRNRQDITQILRNALIQEGTLTGQEHLQPILKER 697 Query: 1268 NIRDGELRRLSTWETHR--------DALVLVDNVYHRIAGI---SKDDGLITLQDAEGNT 1316 N+ +LR + + + + Y + + +K + + L+ G Sbjct: 698 NLTGIKLRNAAYYSQNDIIRFNHTIQRYNIKAGDYLTVGQVTNKNKHNNTLILKHENGQA 757 Query: 1317 ---RLISPREAVAEG------VTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAV 1367 +L S E E V +Y + + + GD++++ ++ G + + T+ + Sbjct: 758 IKFKLSSLPEFRTENKDLERPVEVYRREQLSLMAGDQIQWKRNSEHNGIRNSELATIRQI 817 Query: 1368 SGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMA 1427 + + +T+ P + +H+D Y +T + QG + + L E + + Sbjct: 818 NNEGITIITEDNQTLHLPHGAKELRHLDHGYVLTTYATQGKDKKRGLGLI--ESQNRFAS 875 Query: 1428 GFESAYVALSRMKQHVQVYTDNRQGWTDAI-NNAVQKGTAHDVFEPKPDREVMNAERLFS 1486 ++ YV +R + V TD++ AI N K ++ D+ + + A Sbjct: 876 TIQNYYVETTRGIWEMIVVTDDKDHLVKAITTNNSDKYSSMDMVDSDT-LKAHEARFKEH 934 Query: 1487 TARELRDVAAGRAVLRQAGLAG 1508 + A + + ++ G Sbjct: 935 KNSIVLQNAIEKKLSKEQDWKG 956 >UniRef50_B7KMV0 Conjugative relaxase domain protein n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KMV0_CYAP7 Length = 1170 Score = 458 bits (1177), Expect = e-126, Method: Composition-based stats. Identities = 204/1125 (18%), Positives = 403/1125 (35%), Gaps = 157/1125 (13%) Query: 10 AGSAGNYYTD-----KDNYYVLGS--MGERWAGRGAEQLGLQGSVDKDVFTRLLEGRLPD 62 + G YT+ ++NYY G W G+ A + GL G + + F + P+ Sbjct: 2 VATVGRCYTNPKDYAQENYYSTGDGLTNSEWLGKAASEQGLFGQIQEQHFHNAYQALDPN 61 Query: 63 GADLSRMQDGSNR----HRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVE 118 G L R Q+ + +RPG D+T SAPKS+S+ A++ GD +++AH AV + VE Sbjct: 62 GDPLRRQQNYRKQVQRHNRPGTDVTLSAPKSISVAALVMGDNLILEAHKAAVRATMNYVE 121 Query: 119 AL-ASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVT-QHNGEWKTLS 176 + G+ + + +A+F+HD +R+++PQLH+H V+ N T +G+W+ ++ Sbjct: 122 KNCIFYQTKQKGKKLLLQSKTAQIAVFHHDDNRNKDPQLHSHCVILNQTLCPDGKWRAVA 181 Query: 177 SDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVEA--- 233 + E +Y G Y +L Q+E G + + H ++E+ GV E Sbjct: 182 N---------EQLYTQIKTIGAYYAHELARQLEQNGCKIQWTDDH-IFELAGVDKEKLDA 231 Query: 234 -FSGRSQTIREAVG------EDASLKSRDVAALDTRKSKQHV----DPEIKMAEWMQTLK 282 FS RS I + + A+ + + L TRK K+H D E ++ W Q Sbjct: 232 IFSTRSNQIEAELEKLGLTRKTANAQVKQTLCLKTRKEKKHHHQPEDRERQLQRWKQRAT 291 Query: 283 ETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLAR 342 E G +I ++A PG + ++ A L+ R+ F ++L Sbjct: 292 EAGIEINREHKTGLEKAYNHPSHPGSIP-------ELLSDASNILTSRQTAFREHELLKE 344 Query: 343 TVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQ 402 + A I++ +E+L+P G T+ + E + L+ Sbjct: 345 CLRQSQ-GKYDPNLLLAEINQ---KEELVPTRD--GRLTTKSQLNRERKIIELANTGKNS 398 Query: 403 NRVTVHPEKS------VPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMA 456 E++ G + A+ + R ++ +V G G G+ + L Sbjct: 399 RIPLASREQAQIIAQKRGLNTGQTTALIHIVTSRNAVVLVQGNAG-VGKTYTMNALKQTI 457 Query: 457 REQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLK 516 Q ++ +A + ++ + +S + + ++VD+ LS Sbjct: 458 GNQ--PIRGLAPSAAAADVLQIESGISSQTLASYLLTKNER-LPKKEILLVDEAGMLSSV 514 Query: 517 ETLTLLDGAARHNVQVLITDSGQRTG---TGSALMAMKDAGVNTYRW-QGGEQR------ 566 + LL+ A +N +V++ ++ G+ +++ + T Q QR Sbjct: 515 QMEQLLEKAQANNNRVILVGDTKQLSAVEAGAPFKLLQEHSLPTAIIDQNLRQRDPSLKQ 574 Query: 567 ------------------------PATIISEPDRNVRYARLAGDFAASVKAGEESVAQVS 602 + R ++ D+ + ++ Sbjct: 575 VVDKMATHDRDESSINQAYQSLYHQGKVKQIAQEKERVEAISNDYLSRTTEVRNKTLILA 634 Query: 603 GVR-EQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVME-QWN 660 G ++ I+T AIR L +GVLG + L LD + Y+ G V++ Q + Sbjct: 635 GTNADKQIITTAIRQGLMNEGVLGSESKELQTLKRKDLDKFAITKAHHYQRGDVIKFQID 694 Query: 661 PETRSHD-RYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLR 719 S D Y + V + ++++TL D G + + +++ +++ + GE++R Sbjct: 695 NAQFSRDFYYRVTDVNSITNTVTLIDTNGVDYTLPLDKYKQR-EVYQVQQLEIRLGEQMR 753 Query: 720 VTGKIPGLRVS--GGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVET 777 T I G R V + ++ + P ++ Sbjct: 754 FTKNISNHDYKQLNGQRFTVVGFTLYGQISLLTKGKTMSVSPSQLLHSDYRYVD---TVH 810 Query: 778 PGHSVSDSATVFASVTQMAMD---NATLNGLARSGRDVRLYSS---------------LD 819 + ++ + ++ + +R+ ++ +Y++ + Sbjct: 811 SSQGQTADYCIYCASAAKSLTIGRESFYVAASRAKQEFIVYTANATDLGVTVQISRANEN 870 Query: 820 ETRTAEKLARHPSFTVVSEQIKTR-------AGETSLETAISHQKSALHTPAQQAIHLAL 872 + +K + SE I T A +T + S + + +AL Sbjct: 871 ASDLVKKQVEEGQKSSPSENISTAPSLTHPFAPKTDKDEKASFDNQLSQLSDAELVSVAL 930 Query: 873 PVVESKKLAFSMVDLLTE-AKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLL 931 V E A L E A E ++ ++ + L + + Sbjct: 931 SVQEWLSSAPREPSLNKEKALRSEIEELQHHQIKLNKQLVTQKQESLQLGEPRSLFNPFG 990 Query: 932 VSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQR---AATRMILETSDRFT 988 VS+ I+ + L+ + L+ + EL + S Q+ A L + Sbjct: 991 VSKE-------IIDNQLQKIQLTSSLLHDIEFELKKTKNSFQKWQSEAKAYSLWEENP-- 1041 Query: 989 VVQGYAGVGKTTQFRAVMSAV-------NMLPESERPRVVGLGPT 1026 KT + + + + + E + GL T Sbjct: 1042 ---------KTKKVKQLAEQLKSQTIKERIARIKEGYVLYGLAQT 1077 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 155/699 (22%), Positives = 278/699 (39%), Gaps = 80/699 (11%) Query: 791 SVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLE 850 +T+ + L R + + E R +L R + R +T LE Sbjct: 248 GLTRKTANAQVKQTLCLKTRKEKKHHHQPEDR-ERQLQRWKQRATEAGIEINREHKTGLE 306 Query: 851 TAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINA 910 A +H P + + A ++ S++ AF +LL E + L EIN Sbjct: 307 KAYNHPSHPGSIP--ELLSDASNILTSRQTAFREHELLKECLRQSQGKYDPNLLLAEIN- 363 Query: 911 QIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEK-- 968 ++ +L+ G L +++ E+ I+ GK + +PL R +++ + Sbjct: 364 --QKEELVPTR------DGRLTTKSQLNRERKIIELANTGKNSRIPLASREQAQIIAQKR 415 Query: 969 -LTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTH 1027 L +GQ A I+ + + +VQG AGVGKT A+ + P + GL P+ Sbjct: 416 GLNTGQTTALIHIVTSRNAVVLVQGNAGVGKTYTMNALKQTIGNQP------IRGLAPSA 469 Query: 1028 RAVGEMR-SAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYAL 1086 A ++ +G+ +QTLAS+L + + L+DE+ M+ + M + Sbjct: 470 AAADVLQIESGISSQTLASYL-------LTKNERLPKKEILLVDEAGMLSSVQMEQLLEK 522 Query: 1087 IAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQT-PELREAVYSLIN 1145 A R + GDT QL A+ G PF+L Q S AI+ + +RQ P L++ V + Sbjct: 523 AQANNNRVILVGDTKQLSAVEAGAPFKLLQEHS-LPTAIIDQNLRQRDPSLKQVVDKMAT 581 Query: 1146 RDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVP 1205 D + + + + + + ++A+ +++ Sbjct: 582 HDRDES------------------SINQAYQSLYHQGKVKQIAQEKER------------ 611 Query: 1206 MTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLN 1265 EAI DY RT E R +TLI+ N D++++ + I G LG E + L Sbjct: 612 ---VEAISNDYLSRTTEVRNKTLILAGTNADKQIITTAIRQGLMNEGVLGSESKELQTLK 668 Query: 1266 TANIRDGELRRLSTWETHR------DALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLI 1319 ++ + + ++ D + Y+R+ ++ +TL D G + Sbjct: 669 RKDLDKFAITKAHHYQRGDVIKFQIDNAQFSRDFYYRVTDVNSITNTVTLIDTNGVDYTL 728 Query: 1320 SPREAVAEGVTLYTPDTIRVGTGDRMRFTKS--DRERGYVANSVWTVTAVSG-DSVTLSD 1376 + + +Y + + G++MRFTK+ + + + +TV + ++L Sbjct: 729 PLDK--YKQREVYQVQQLEIRLGEQMRFTKNISNHDYKQLNGQRFTVVGFTLYGQISLLT 786 Query: 1377 GQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVAL 1436 +T + P Q H D Y T H +QG + + I + L G ES YVA Sbjct: 787 KGKTMSVSPSQ---LLHSDYRYVDTVHSSQGQTADYCIYCASA--AKSLTIGRESFYVAA 841 Query: 1437 SRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPD 1475 SR KQ VYT N + + A D+ + + + Sbjct: 842 SRAKQEFIVYTANATDLGVTVQISRANENASDLVKKQVE 880 >UniRef50_Q30Q32 ATP-dependent exoDNAse (Exonuclease V) alpha subunit-helicase superfamily I member-like protein n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30Q32_SULDN Length = 1112 Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats. Identities = 166/939 (17%), Positives = 380/939 (40%), Gaps = 106/939 (11%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWA--GRGA---EQLGLQGSVDKDVFTRL 55 MMSI+ +S+ A NY+ +YY W G + + + Q ++ K+ + Sbjct: 1 MMSISSWQSSAQAENYFQQDLDYYQKNQELGEWHITGEMSNRYQNIAHQSAITKESYQDF 60 Query: 56 LEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDK---RLIDAHNQAVDF 112 D + + + + R G+D+TFS KS+ ++ + D+ ++ A ++AV+ Sbjct: 61 A-----DLINQNLKGNATGNQRAGFDITFSPSKSIDVIYAVANDELKKSILQAQDRAVNL 115 Query: 113 AVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHN-GE 171 A+ + + R+ + E L +A F H ++R++E ++HTH +AN T ++ GE Sbjct: 116 ALEKASRYITYRMRNENGREHFQNNGLAIAKFQHLSNRNEEIKIHTHCFIANQTINSKGE 175 Query: 172 WKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVG-KHGMWEMPGVP 230 ++ + + +Y NQ ++Y ++L ++++ LG+++EV+ + + E+ GV Sbjct: 176 LVSIDN---------KQLYDNQKLITQIYHQELFQEMQKLGFQSEVLDIQKDILEIKGVT 226 Query: 231 VEA---FSGRSQTIREAVGED-----------ASLKSRDVAALDTRKSKQHVDPEIKMA- 275 EA S R+ I + + E+ + R +A L+TR KQ Sbjct: 227 QEARNSISTRTAEIEKWLLENRKELLRKYPNANESQLRQIATLETRNYKQSHSYSELEEI 286 Query: 276 --EWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQ 333 + ++ TGF + ++Q + + +A +E + Sbjct: 287 ELKNKNLVENTGFTKETIH---------QIQNLEKSNQKILSLDELTQKAAQLTTEHEST 337 Query: 334 FTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVR 393 FT ++L+R + + ++ + + ++ A+ +I LD ++T+ + E + Sbjct: 338 FTSEEILSRAIKLNAIQSYTYDL--STLENAVLNSDIIKLDEN--IYTTQEMINIEREIL 393 Query: 394 ALSRDIMKQNRVTVH--------PEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQ 445 +++ + E TAG +A S + + ++ + G G G+ Sbjct: 394 TYAQESKNTAQAETTLDKAEQFLSENFSTMTAGQKEAFSHVLTSKDAILGIQGDAG-VGK 452 Query: 446 RERVAELVMMAREQGRE--VQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGS 503 + V ++ ++ + +A ++ + ++ + G+ I + Sbjct: 453 TFMLK-AVKEFQKLHKKDNLIGLAPTNKAADEISKESGIKGQTIDS---FIHQRQHKQNQ 508 Query: 504 TVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR---TGTGSALMAMKDAG------ 554 +IVD+ + ++ L D A + N ++++ ++ G G+ ++ G Sbjct: 509 IIIVDEASMVDSRKMQKLTDIAQQTNSKLVLMGDTKQFTSIGAGAIFEQLQAKGAIEVAV 568 Query: 555 -----------VNTYRWQGGEQRPATIISEPDRNVRYARL-AGDFAASVKA----GEESV 598 + EQ+ ++ + ++ + A D+++ VK + ++ Sbjct: 569 MAESMRAKTADMKELYKLTKEQKTDAVLDILESKNQFQTIEAEDYSSVVKEYLQDKDNTL 628 Query: 599 AQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQ 658 V + + L + IR ELK + ++ + LDS S + Y G +++Q Sbjct: 629 LLVMKNQTRQELNELIRDELKKDNSISSHQI-LHIQEKQQLDSISVHHYTSYEVGDMVQQ 687 Query: 659 ---WNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADG 715 + +S VI V + +S+TL+DA+G ++ V + +L++ + + Sbjct: 688 AGSYKGSLKSGTEAVIASVNEELNSITLQDAKGNSKEVNLGEHGDKLNLYKTTQKEFSQN 747 Query: 716 ERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWV 775 +++ T K L ++ GD V + + +TV + + ++ + + Sbjct: 748 DKIIFTKKDKSLGLNNGDIGTVKEIKDGFLTVDTGKKE----IKINTKEYNYIDHAYAIT 803 Query: 776 ETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDE---TRTAEKLARHPS 832 + ++F ++++ NA L R+ + +Y+ E AE+ + + Sbjct: 804 NHKAQGQTSERSIFVGDSRLSSQNAFYVALTRAKAHISIYTQDKEQFRDAVAERQVKRST 863 Query: 833 FTVVSEQI-KTRAGETSLETAISHQKSALHTPAQQAIHL 870 +E+I K RA E + + Q+ I+L Sbjct: 864 LDYNTEEILKRRANELTKIQGLHKSSDRSTAREQKTINL 902 Score = 332 bits (852), Expect = 6e-89, Method: Composition-based stats. Identities = 141/653 (21%), Positives = 269/653 (41%), Gaps = 91/653 (13%) Query: 866 QAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKG 925 + A + + F+ ++L+ A A + +L + + D++ +D Sbjct: 322 ELTQKAAQLTTEHESTFTSEEILSRAIKLNAIQSYTYDLST-LENAVLNSDIIKLD---- 376 Query: 926 YGTGLLVSRASYEAEKSILRHILEGKEAVMP-----LMERVPGELMEKLTSGQRAATRMI 980 + ++ E+ IL + E K E+ E +T+GQ+ A + Sbjct: 377 --ENIYTTQEMINIEREILTYAQESKNTAQAETTLDKAEQFLSENFSTMTAGQKEAFSHV 434 Query: 981 LETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM-RSAGVD 1039 L + D +QG AGVGKT +AV + + ++GL PT++A E+ + +G+ Sbjct: 435 LTSKDAILGIQGDAGVGKTFMLKAVKEFQKLHKKDN---LIGLAPTNKAADEISKESGIK 491 Query: 1040 AQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGD 1099 QT+ SF+H Q +Q N + ++DE+SMV + M + + + V GD Sbjct: 492 GQTIDSFIHQRQHKQ---------NQIIIVDEASMVDSRKMQKLTDIAQQTNSKLVLMGD 542 Query: 1100 TDQLQAIAPGQPFRLQQTRSAADVAIMKEIVR-QTPELREAVYSLINRDVERALSGLESV 1158 T Q +I G F Q + A +VA+M E +R +T +++E + + L LES Sbjct: 543 TKQFTSIGAGAIFEQLQAKGAIEVAVMAESMRAKTADMKELYKLTKEQKTDAVLDILES- 601 Query: 1159 KPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTG 1218 F + Y ++V++Y Sbjct: 602 ---------------------------------------KNQFQTIEAEDYSSVVKEYL- 621 Query: 1219 RTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLS 1278 + ++ TL++ N+ R+ LN +I D +K + Q++ + + + Sbjct: 622 ---QDKDNTLLLVMKNQTRQELNELIRDELKKDNSISSHQILHIQ-EKQQLDSISVHHYT 677 Query: 1279 TWETHRDALV-------LVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTL 1331 ++E L IA ++++ ITLQDA+GN++ ++ E + + L Sbjct: 678 SYEVGDMVQQAGSYKGSLKSGTEAVIASVNEELNSITLQDAKGNSKEVNLGEH-GDKLNL 736 Query: 1332 YTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAE 1391 Y D++ FTK D+ G + TV + +T+ G++ +I + Sbjct: 737 YKTTQKEFSQNDKIIFTKKDKSLGLNNGDIGTVKEIKDGFLTVDTGKKEIKIN---TKEY 793 Query: 1392 QHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQ 1451 +ID AYAIT H AQG + +I + + ++ + YVAL+R K H+ +YT +++ Sbjct: 794 NYIDHAYAITNHKAQGQTSERSIFVGDS-----RLSSQNAFYVALTRAKAHISIYTQDKE 848 Query: 1452 GWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQA 1504 + DA+ K + D + + + + L ++ R+ R+ Sbjct: 849 QFRDAVAERQVKRSTLDY---NTEEILKRRANELTKIQGLHK-SSDRSTAREQ 897 >UniRef50_B5JHM8 TrwC relaxase family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JHM8_9BACT Length = 931 Score = 443 bits (1140), Expect = e-122, Method: Composition-based stats. Identities = 190/909 (20%), Positives = 343/909 (37%), Gaps = 101/909 (11%) Query: 15 NYYTDKDNYYVLGSMGERWAGRGAEQLGLQG-SVDKDVFTRLLEGRLPDGADLSRMQDGS 73 NYY + Y + + G+ A +LGL VDK F L + R P D D Sbjct: 3 NYYIEHSYYRTSNDSKQVYKGKLAMRLGLSNKEVDKLSFEALTKNRDPLTGDRLTFHDDK 62 Query: 74 NRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEALASTRVMTDGQSET 133 + H YD F +PK VS+++ L GD+R+ A AV+ A+++VE A RV G + + Sbjct: 63 SVH--AYDFNFHSPKGVSILSKLAGDERIGKAIMAAVNEAMKEVEKNAMCRVRKGGANYS 120 Query: 134 VLTGNLVMALFNHDTSRD----QEPQLHTHAVVANVTQHNGEWKTLSSDKVGKTGFIENV 189 + L+ A SR +P H H +V NVT W + + K + Sbjct: 121 RESRELLWAEMPDSHSRPVNGVPDPHEHCHCLVFNVT-----WDPIEKCQ--KVIKATQI 173 Query: 190 YANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP---VEAFSGRSQTIREAVG 246 N +Y +L +VE LGY E GK W++ G+P E FS R++ I + V Sbjct: 174 KNNAPLLQAIYLSRLATEVEKLGYRIEKDGK--GWDIAGIPSETKEKFSNRTKQIDDYVR 231 Query: 247 EDASLKSRD--VAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTL 304 + + + + A TRK K + + + W L ET Q+ +R + Sbjct: 232 DHGLVDACEMGAAGAKTRKGKNKLSQKEIQSNWDSRLTET-------EKNDLQKMKMRAI 284 Query: 305 TPGPASQ--DGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGID 362 GP + D ++A++ ++ ER T ++LA + + P ++ Sbjct: 285 MNGPIVRISDPSIAREALSHSVEKNFERNSVATQPNLLAEAL-LYKPGKVSLDELTVLTG 343 Query: 363 EAISREQLIPLDREKGLFTSGIHVLDE----LSVRALSRDIMKQNRVTVHPEKSVPRTAG 418 S E D+ + + VL E + +R ++ + + Sbjct: 344 ---SSEFQTAKDKHGRKWVTTAAVLREEKSCIDYVYRNRGNGERLGSKQYRISDTRLSEE 400 Query: 419 YSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQ 478 AV + R S+ + G G +G+ + E+ E G +V+ A R+ +K+ Sbjct: 401 QRSAVHQILDSRDSVTALLGPAG-SGKTTLIQEVQKGLNEAGHKVRFFAPSGRAVDVLKE 459 Query: 479 DERLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLI-TDS 537 D + I + E G + VD+ LS + L A ++++ D Sbjct: 460 D-AFKADTIQSLLKADEISDEMRGKVIWVDEAGLLSFPQMSKLFSMAESAGCRIVMSGDQ 518 Query: 538 GQRTGT--GSALMAMKDAG------VNTYRWQGGEQRPATIISE---------------- 573 Q T G AL + G ++ R Q E I S Sbjct: 519 AQHTAVERGDALRVLLKHGGLNGPSISQIRRQKKEPLRDAISSLSNPERDFESVVNGFKK 578 Query: 574 ----------PDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGV 623 D R A +A ++ S + E + E +T A+R++L+ +G Sbjct: 579 LEKEGCIHELQDEESRLANIADEYFESRQNEESCLVVSPTHIEGKKVTNAVRAKLQAEGK 638 Query: 624 LGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNP---ETRSHDRYVIDRVTAQSHS 680 L P + L+ + +D+ + + + Y G+V++ R+ Y++ + T Sbjct: 639 LQGPSKSFETLTDLSMDTADKRIAENYEAGLVVKFHRHCPNNLRAGQDYLVTKTTKDE-- 696 Query: 681 LTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRV---SGGDRLQV 737 + +R G V+ + L + +F E + + +++++T K S V Sbjct: 697 VVIRKPNGLDAVLPL-HLAERFGVFDRETIDLRKRDKVQLTAKYKSRSGRTHSNKSIFTV 755 Query: 738 ASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSA-TVFASVTQMA 796 A + + G + D F +L +G+V T S ++ V + + + Sbjct: 756 AGFTRKGEIKLNNGT-------ILDPEFK--QLTHGYVTTSHSSQGETVDRVIVAQSSAS 806 Query: 797 MDN----ATLNGLARSGRDVRLYSSLDETRTAEKLA--RHPSFTVVSE-QIKTRAGETSL 849 + +R+ ++ +Y+ E L PS T + E ++ + Sbjct: 807 HNAASSEQFYVSCSRARENISVYTDDSEALLDNVLESCHRPSATELLEGDLRDKGELWEF 866 Query: 850 ETAISHQKS 858 AI + S Sbjct: 867 REAIQRKHS 875 Score = 337 bits (865), Expect = 2e-90, Method: Composition-based stats. Identities = 121/672 (18%), Positives = 257/672 (38%), Gaps = 81/672 (12%) Query: 816 SSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTP--AQQAIHLALP 873 + + + ++K + + ++E K + + ++ + P A++A+ ++ Sbjct: 248 TRKGKNKLSQKEIQSNWDSRLTETEKNDLQKMKMRAIMNGPIVRISDPSIAREALSHSVE 307 Query: 874 VVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVS 933 + + +LL EA + EL + G + +G + + Sbjct: 308 KNFERNSVATQPNLLAEALLYKPGKVSLDELT------VLTGSSEFQTAKDKHGRKWVTT 361 Query: 934 RASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGY 993 A EKS + ++ + L + +L+ QR+A IL++ D T + G Sbjct: 362 AAVLREEKSCIDYVYRNRGNGERLGSKQYRISDTRLSEEQRSAVHQILDSRDSVTALLGP 421 Query: 994 AGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVDAQTLASFLHDTQLQ 1053 AG GKTT + V +N +V P+ RAV ++ A T+ S L ++ Sbjct: 422 AGSGKTTLIQEVQKGLNEA----GHKVRFFAPSGRAVDVLKEDAFKADTIQSLLKADEI- 476 Query: 1054 QRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFR 1113 + + + +DE+ ++ M++ +++ + G R V SGD Q A+ G R Sbjct: 477 -----SDEMRGKVIWVDEAGLLSFPQMSKLFSMAESAGCRIVMSGDQAQHTAVERGDALR 531 Query: 1114 LQQTRSAADVAIMKEIVRQTPE-LREAVYSLIN--RDVERALSGLESVKPSQVPRQEGAW 1170 + + + +I RQ E LR+A+ SL N RD E ++G + ++ Sbjct: 532 VLLKHGGLNGPSISQIRRQKKEPLRDAISSLSNPERDFESVVNGFKKLE----------- 580 Query: 1171 APEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIV 1230 E + E + + I +Y + + E L+V Sbjct: 581 -KEGCIHELQDEE-----------------------SRLANIADEYFE-SRQNEESCLVV 615 Query: 1231 THLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALV-- 1288 + + + + + + + + G+L L ++ + R +E Sbjct: 616 SPTHIEGKKVTNAVRAKLQAEGKLQGPSKSFETLTDLSMDTADKRIAENYEAGLVVKFHR 675 Query: 1289 -----LVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGD 1343 L + + +KD+ + ++ G ++ +AE ++ +TI + D Sbjct: 676 HCPNNLRAGQDYLVTKTTKDE--VVIRKPNGLDAVLPL--HLAERFGVFDRETIDLRKRD 731 Query: 1344 RMRFT---KSDRERGYVANSVWTVTAVS-GDSVTLSDGQQTREIRPGQEQAEQHIDLAYA 1399 +++ T KS R + S++TV + + L++G + + + Y Sbjct: 732 KVQLTAKYKSRSGRTHSNKSIFTVAGFTRKGEIKLNNGTIL-------DPEFKQLTHGYV 784 Query: 1400 ITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINN 1459 T+H +QG + I A E YV+ SR ++++ VYTD+ + D + Sbjct: 785 TTSHSSQGETVDRVIV--AQSSASHNAASSEQFYVSCSRARENISVYTDDSEALLDNVLE 842 Query: 1460 AVQKGTAHDVFE 1471 + + +A ++ E Sbjct: 843 SCHRPSATELLE 854 >UniRef50_B1ZY28 Conjugative relaxase domain protein n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZY28_OPITP Length = 910 Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats. Identities = 204/894 (22%), Positives = 346/894 (38%), Gaps = 111/894 (12%) Query: 1 MMSIAQVRSAGSAGNYYTDK---DNYYVLGSM-GERWAGRGAEQLGLQGSVDKDVFTRLL 56 M+ + +A Y+ D +YY G W G AE+LGL G+V + F L Sbjct: 1 MLRPKPQLNLQNAREYFRDHLRVGDYYSEGQTIAGDWLGLAAERLGLTGAVTEKEFLALC 60 Query: 57 EGRLPDGADLSRMQDGSNRH---------RPGYDLTFSAPKSVSMMAMLGGDKRLIDAHN 107 EG P+ + + R R +D T S PKSVS++A D R++DAH Sbjct: 61 EGLHPETGKRLTARMNTARRVDGKLAANRRIFHDFTISPPKSVSIVARC-QDSRIVDAHR 119 Query: 108 QAVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ 167 AV A+ ++E A TR+ Q+ +TGN+V A F HDTSR +P LHTH VV N T Sbjct: 120 DAVRLAMIELEKFAETRIRKSKQNAERVTGNIVAACFQHDTSRALDPHLHTHCVVFNATF 179 Query: 168 H--NGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWE 225 WK L + +Y Q LY +L +++ +LGY E ++ +E Sbjct: 180 DPVENRWKALQT---------VGMYRAQKFAENLYFHELSKRLRSLGYGIENNARN--FE 228 Query: 226 MPGVP---VEAFSGRSQTIREAVGED-ASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTL 281 + VP +E FS R I A+ D+ AL R + +H D +IK A + L Sbjct: 229 ISRVPAALIERFSKRHAQIAAEAERYVANGYDGDIGALRRRLAHEHRDRKIKGA-TAELL 287 Query: 282 KETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLA 341 +E ++ + D A LR + PA D++ V A L + +++A Sbjct: 288 REH-WNRQLSPDEARALTGLRGV---PAITQRADLRSIVGWADEHLFTHRAVVNDYELIA 343 Query: 342 RTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMK 401 + EN ++ R+ +++ + D + L S + EL + ++D K Sbjct: 344 TALARGRGENFDLDALRSAVEQ----HGYLREDGTRKLI-SAELLRCELDIVLAAQDGRK 398 Query: 402 QNRV-TVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQG 460 ++R + S ++ A + R + + G G G+ + E+ + Sbjct: 399 RHRALNPNYHPSPSLSSEQERAARRILTSRDFITLFRGGAG-TGKSHTLKEVALGLAAAE 457 Query: 461 REVQIIAADRRSQMNMKQD----ERLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLK 516 R V ++A R+ ++ D E L+ L TGR G+ VI+D+ ++ + Sbjct: 458 RPVVVLAPQRQQVHALETDGLPAETLARTLATGR--------LDHGAVVILDEAGQVGGR 509 Query: 517 ETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMKD---------AGVNTYRWQG----- 562 + L+ H +++++ ++ G +A A++ A + T R Q Sbjct: 510 DLHALIRLVQAHGGRLILSGDTRQHGAVAASDALRAIEQHAKPRVAVLRTIRRQNPALAR 569 Query: 563 --------------------GEQRPAT-------IISEPDRNVRYARLAGDFAASVKAGE 595 G+Q + + E VR +AG++ +++ GE Sbjct: 570 TSEERRFIRRYRAVVKKASEGKQAESFDLLDQLGCVRELPDEVRGVAVAGEYLTAMERGE 629 Query: 596 ESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMV 655 V E + A+R+ L + G LG P PV + Y PG Sbjct: 630 SVVVVAQTWNEVHAVNDAVRTALHSAGKLG-PGTPTVTYQPVDRSESQKRDPRFYEPGQA 688 Query: 656 MEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADG 715 R + A + L G V + + + M +A G Sbjct: 689 AHFLRSYGRFKKGDTCEIAEANDRGVVLVK-DGRRSTVGYR-HAERFIVTKRTDMEIAPG 746 Query: 716 ERLRVTGKIP---GLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLEN 772 +RL++ G R+ G+ + VA+V +V R TL S L Sbjct: 747 DRLQLKANGRSVEGTRLHNGELVTVANVDSSGALIVTDERGATKTLTSSQ-----RLLVR 801 Query: 773 GWVETP--GHSVSDSATVFASVTQMAMDNAT--LNGLARSGRDVRLYSSLDETR 822 G+ T + +FA + A NA ++R + V +++ + Sbjct: 802 GYAVTSYGSQGKTVDTVLFADAGERAATNAQQWYVTISRGRKRVVVFTPDKDQL 855 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 129/682 (18%), Positives = 240/682 (35%), Gaps = 74/682 (10%) Query: 822 RTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLA 881 TAE L H + + ++ + G + + + A + + + Sbjct: 282 ATAELLREHWNRQLSPDEARALTGLRGVPAITQRA------DLRSIVGWADEHLFTHRAV 335 Query: 882 FSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEK 941 + +L+ A + +L +A + G L + GT L+S E Sbjct: 336 VNDYELIATALARGRGENF--DLDALRSAVEQHGYL------REDGTRKLISAELLRCEL 387 Query: 942 SILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQ 1001 I+ +G++ L L+S Q A R IL + D T+ +G AG GK+ Sbjct: 388 DIVLAAQDGRKRHRALNPNYHPS--PSLSSEQERAARRILTSRDFITLFRGGAGTGKSHT 445 Query: 1002 FRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPD 1061 + V L +ERP VV L P + V + + G+ A+TLA L +L + Sbjct: 446 LKEV---ALGLAAAERPVVV-LAPQRQQVHALETDGLPAETLARTLATGRLDHGA----- 496 Query: 1062 FSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAA 1121 + +LDE+ VG D+ L+ A GGR + SGDT Q A+A R + + Sbjct: 497 ----VVILDEAGQVGGRDLHALIRLVQAHGGRLILSGDTRQHGAVAASDALRAIEQHAKP 552 Query: 1122 DVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSH 1181 VA+++ I RQ P L R + R + ++ + V E Sbjct: 553 RVAVLRTIRRQNPALARTSEE--RRFIRRYRAVVKKASEGKQAESFDLLDQLGCVRELPD 610 Query: 1182 SQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLN 1241 A+ +Y E E ++V + +N Sbjct: 611 EVRGV------------------------AVAGEYLT-AMERGESVVVVAQTWNEVHAVN 645 Query: 1242 SMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGI- 1300 + AG+LG V + + + R +E + A L + Sbjct: 646 DAVRTALHSAGKLGPGTPTVT-YQPVDRSESQKRDPRFYEPGQAAHFLRSYGRFKKGDTC 704 Query: 1301 ---SKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDR---ER 1354 +D + L +G + R AE + + + GDR++ + R Sbjct: 705 EIAEANDRGVVLVK-DGRRSTVGYRH--AERFIVTKRTDMEIAPGDRLQLKANGRSVEGT 761 Query: 1355 GYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAI 1414 + TV V + ++ Q + YA+T++G+QG + + Sbjct: 762 RLHNGELVTVANVDSSGALIVTDERGATKTLTSSQRL--LVRGYAVTSYGSQGKTVDTVL 819 Query: 1415 ALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKP 1474 + E + + YV +SR ++ V V+T ++ + + ++ A + Sbjct: 820 FADAGE---RAATNAQQWYVTISRGRKRVVVFTPDKDQLRTRVESPGERELATEGERLAL 876 Query: 1475 DREVM--NAERLFSTARELRDV 1494 + + L++T R +++ Sbjct: 877 ALRWTQQHRQELWATQRPRQEM 898 >UniRef50_B8GZQ5 DNA relaxase/conjugal transfer nickase-helicase trwC n=3 Tax=Alphaproteobacteria RepID=B8GZQ5_CAUCN Length = 936 Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats. Identities = 241/917 (26%), Positives = 361/917 (39%), Gaps = 102/917 (11%) Query: 16 YYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRLPDGADLSRMQDGSNR 75 YY D + G+ RW G GA LGL+G VD + F +LL+G L D L +D + Sbjct: 39 YYEADDYHAEGGAAPSRWQGSGAAALGLEGEVDPERFRQLLDGVLSDHVALGARRDEGRQ 98 Query: 76 HRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEALA-STRVMTDGQSETV 134 HRPG+DLT SAPKS+S+MA++ GD+RL AH AV+ A+ E A TR+ + V Sbjct: 99 HRPGWDLTLSAPKSISIMALVAGDRRLHAAHAAAVEAALAFTERHAGGTRIRDGERVAHV 158 Query: 135 LTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH-NGEWKTLSSDKVGKTGFIENVYANQ 193 TG L MA F H+TSR Q+PQLHTHAV+ N+T+ G W++L S +Y Q Sbjct: 159 RTGALAMATFQHETSRAQDPQLHTHAVILNMTRDLEGTWRSLDS---------RALYQLQ 209 Query: 194 IAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPV---EAFSGRSQTIREAVG---- 246 G +YR++L V ALGY E VGK M+E+ VP EAFS R++ + + Sbjct: 210 KTIGEVYRQELAGAVRALGYAIE-VGKESMFEISDVPASVREAFSERARQVEAHLATKGL 268 Query: 247 --EDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTL 304 A+ + + A L TR SK+ D W GF A R + D Sbjct: 269 TRATATAEEKQAATLYTRASKKAADRAELSRAWRVEADGLGFSSEARRSLLTEALDRAEA 328 Query: 305 TPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEA 364 + + Q AV A L ER+ F+ + L R G A +D+ Sbjct: 329 SKAIRDRGAVLAQDAVRFAAEKLGERQAIFSRAE-LEREAGRKAIGLATRTEIMAAVDKR 387 Query: 365 ISREQL--------IPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHP------- 409 QL I LD E FT+ + E + + R+ V P Sbjct: 388 QQSHQLEARALRSPIGLDLEG--FTTDRAIAHEKRLLEIEREGRNALAPIVPPIEASRII 445 Query: 410 --------EKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGR 461 E+ + + A + R ++ V G G A +A L A EQG Sbjct: 446 NAASLAASERGLAWSDDQRRATKAVLTSRSAVVGVQGFAGTAKTTTVLATLAKAAAEQGY 505 Query: 462 EVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTP--GSTVIVDQGEKLSLKETL 519 +V+ +A + + + + L G I R L+E P IVD+ +S ++ Sbjct: 506 QVKALAPSASAAITLGEALDLEGRTIA--RHLVERPNARPSARELWIVDEASLVSARDMA 563 Query: 520 TLLDGAARHNVQVLITDSGQR---TGTGSALMAMKDAGVNTYRW---------------- 560 LLD A R + L+ + G G+A ++DAG+ T Sbjct: 564 RLLDEAQRRGARTLLVGDAHQLGSVGAGAAFRQLQDAGLETAHLTKIVRQSNTLTLEAVE 623 Query: 561 --QGGEQRPA---------TIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVRE-QA 608 G R A II R A +A FA A + RE + Sbjct: 624 ATLAGHARRAFDALDRGGGQIIEAQSVEDRQALIAAHFAQLDSAQRRRTLIIDPSREGRE 683 Query: 609 ILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPET----R 664 LT IR+EL G LG VT+T+L L R Y PG ++ T Sbjct: 684 QLTARIRAELIAAGHLGKAAVTVTSLVAKDLTQAERKEAGSYAPGDIVTFARTLTGKAVA 743 Query: 665 SHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSW---SLFRPEKMPVADGERLRVT 721 Y + V A+ ++TL D + RI W F P + G+R+ T Sbjct: 744 KDTAYEVQAVDARRRTVTLSDGRD----ARIDWAPHRWGSAEAFEPVDRELRQGDRIEFT 799 Query: 722 GKIPGLRVSGGDRLQVASVSEDAMTV-VVPGRAEPATLPVSDSPFTALKLENGWVET--P 778 L G + ++ S+ +A V R TL ++ + +V+T Sbjct: 800 RNNMRLHQVNGLQGEIVSLDVEARKAQVRTDRGHIRTLDLN--ALQDRHFRHAYVQTAFA 857 Query: 779 GHSVSDSATVFASVTQMAM---DNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTV 835 + +F + +Q + ++R+ + + D + + + Sbjct: 858 AQGRTTDHVLFHAESQRSNLIDQATLYVAISRARHGATIVTD-DRAKVIRGVEARSGRRL 916 Query: 836 VSEQIKTRAGETSLETA 852 + + E L+ Sbjct: 917 TALGAEGSGREAGLDQD 933 Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats. Identities = 139/742 (18%), Positives = 249/742 (33%), Gaps = 83/742 (11%) Query: 753 AEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDV 812 + + +SD P + + + ++ A+ T ATL R+ + Sbjct: 234 GKESMFEISDVPASVREAFSERARQVEAHLATKGLTRATATAEEKQAATL--YTRASKKA 291 Query: 813 RLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLAL 872 E A ++ + A + AQ A+ A Sbjct: 292 A---DRAELSRAWRVEADGLGFSSEARRSLLTEALDRAEASKAIRDRGAVLAQDAVRFAA 348 Query: 873 PVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGL-- 930 + ++ FS +L EA A TE+ ++ + + L + G L Sbjct: 349 EKLGERQAIFSRAELEREAGRKAIGLATRTEIMAAVDKRQQSHQLEARALRSPIGLDLEG 408 Query: 931 LVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEK------------LTSGQRAATR 978 + + EK +L EG+ A+ P++ + + + QR AT+ Sbjct: 409 FTTDRAIAHEKRLLEIEREGRNALAPIVPPIEASRIINAASLAASERGLAWSDDQRRATK 468 Query: 979 MILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA-G 1037 +L + VQG+AG KTT V++ + + +V L P+ A + A Sbjct: 469 AVLTSRSAVVGVQGFAGTAKTT---TVLATLAKAAAEQGYQVKALAPSASAAITLGEALD 525 Query: 1038 VDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVAS 1097 ++ +T+A L + + L+++DE+S+V DMAR G R + Sbjct: 526 LEGRTIARHLVERP------NARPSARELWIVDEASLVSARDMARLLDEAQRRGARTLLV 579 Query: 1098 GDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPEL-REAVYSLINRDVERALSGLE 1156 GD QL ++ G FR Q + + A + +IVRQ+ L EAV + + RA L+ Sbjct: 580 GDAHQLGSVGAGAAFRQLQD-AGLETAHLTKIVRQSNTLTLEAVEATLAGHARRAFDALD 638 Query: 1157 SVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDY 1216 + Q I + Sbjct: 639 RGGGQIIEAQS-------------------------------------VEDRQALIAAHF 661 Query: 1217 TGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRR 1276 R +TLI+ E R L + I AG LGK V V L ++ E + Sbjct: 662 AQLDSAQRRRTLIIDPSREGREQLTARIRAELIAAGHLGKAAVTVTSLVAKDLTQAERKE 721 Query: 1277 LSTWETHR--------DALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEG 1328 ++ + + + + + +TL ++G I Sbjct: 722 AGSYAPGDIVTFARTLTGKAVAKDTAYEVQAVDARRRTVTL--SDGRDARIDWAPHRWGS 779 Query: 1329 VTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTA--VSGDSVTLSDGQQTREIRPG 1386 + P + GDR+ FT+++ V + + V + + Sbjct: 780 AEAFEPVDRELRQGDRIEFTRNNMRLHQVNGLQGEIVSLDVEARKAQVRTDRGHIRTLDL 839 Query: 1387 QEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVY 1446 ++H AY TA AQG + L E R + + YVA+SR + + Sbjct: 840 NALQDRHFRHAYVQTAFAAQGRTTDHV--LFHAESQRSNLIDQATLYVAISRARHGATIV 897 Query: 1447 TDNRQGWTDAIN-NAVQKGTAH 1467 TD+R + + ++ TA Sbjct: 898 TDDRAKVIRGVEARSGRRLTAL 919 >UniRef50_Q0HXX9 TrwC protein n=1 Tax=Shewanella sp. MR-7 RepID=Q0HXX9_SHESR Length = 1035 Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats. Identities = 210/1041 (20%), Positives = 363/1041 (34%), Gaps = 180/1041 (17%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRL 60 MMS ++SA AG+Y+ +KD+YYV G W G GAE LGL G VD++ F LLEG+L Sbjct: 1 MMSPKAIKSASQAGHYF-EKDDYYVDGLSPSEWFGDGAETLGLSGDVDRETFKFLLEGQL 59 Query: 61 PDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEAL 120 PDG L ++DG +H+PG DLTF APKSVS+++ + GD+RL+ AH++AV +R +E Sbjct: 60 PDGQRLGTVRDGEWKHQPGIDLTFLAPKSVSILSEVVGDQRLLSAHDKAVQVVLRYIEQE 119 Query: 121 AST---RVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH-NGEWKTLS 176 R + E T ++V A F H TSR +P LHTH VV N TQ +G W+++ Sbjct: 120 YIVTRNRNRAENTVEYEKTASMVAATFKHTTSRAFDPLLHTHVVVMNATQRADGLWRSIE 179 Query: 177 SDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVE---A 233 + ++ +Q G +YR+ L E+V++LGY+ + K G WE+ + E Sbjct: 180 NKP---------LFIDQKHLGLIYRQYLAEEVQSLGYDLDH-EKGGTWEIASISKEVIRE 229 Query: 234 FSGRSQTIREAVG------EDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGF- 286 FS RS+ I +A+ + A+ ++ A LDTR K H++ + +W + E Sbjct: 230 FSKRSEAIEKALEARGKTRDSATAAEKETATLDTRDRKVHMERGELLEKWHAEIGEDKLN 289 Query: 287 DIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGI 346 D++ + + + +AV AI L ER +T+ D++ Sbjct: 290 DLKKVIRQSQANLPTLEMKTEALLERVKVANEAVMWAIEHLGERDTSWTHHDLVKEA-SR 348 Query: 347 LPPENGVIERARAGIDEAISREQLIPL-----------DREKGLFTSGIHVLDELSVRAL 395 ++ ID AI QLI + + +TS + E V Sbjct: 349 YAGSRVLLSDVNNAIDAAIGSGQLIDKSVRTFDKVSKREIDVRGYTSKAAIDIEDEVLKE 408 Query: 396 SRDIMKQNRVTVHPEKSVPR---------------TAGYSDAVSVLAQDRPSLAIVSGQG 440 + + E++ A A + + V G Sbjct: 409 EYLGRDRVQALCSREQAAAAISNAEEKANEFGYEWNADQRKATEGILLSENRIIGVQGFA 468 Query: 441 GAAGQRERV------------------------AELVMMAREQGREVQIIAADRRSQMNM 476 G A + L+ A Q +Q A R++ Sbjct: 469 GTAKTTSVLRTVAETARDMGYEVRGLTPTNSAGQSLIDGAGIQSGTIQSFLAQNRNEWVQ 528 Query: 477 KQDERLSGELITGRRQLLEGMAFTPG---------------------------------- 502 ++ + I R + +E P Sbjct: 529 ERKTHTQIDKIDKRLEQIEKALSNPYVDEKTGVRIPENSPLYQKRLDELQYERSELQGER 588 Query: 503 -----------STVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTG---TGSALM 548 IVD+ + K LL A + +V++T ++ G+A Sbjct: 589 DGLGKMLEKTPQLWIVDESSMVGTKLMRDLLQRAGQSGARVVLTGDVRQLASVEAGAAFR 648 Query: 549 AMKDAGVNTYRWQG---------------------------------------GEQRPAT 569 +++ G+ TY + ++ Sbjct: 649 QLQNHGMETYHLEEIVRQTNRGTRDAVYLSLMKNASHALSRLEESGSTIKEVVSHKKNGK 708 Query: 570 IISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVRE-QAILTQAIRSELKTQGVLGLPE 628 I E R L D+ A + RE + + +R LK +G LG E Sbjct: 709 IDHEKSGEARRQELVTDYMALAPQERAKSIILEPSREGRRRTNELVREALKKEGALG-EE 767 Query: 629 VTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRS--HDRYVIDRVTAQSHSLTLR-- 684 + + LSPV R + Y+ G ++ R V ++ + L+ Sbjct: 768 LRINQLSPVDATEAERRVVTSYQNGQIVRFARSFKREGIKKGLYYQVVGRDNNDILLKKF 827 Query: 685 --DAQGETQVVRISSLDSS-WSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVS 741 + Q E + +F + +A GE + D V + Sbjct: 828 GANEQAELIRFSPERYAAKNIQMFNLTESGLAVGETIVWRDNDKPTGRLNNDTATVEKIE 887 Query: 742 EDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAM---D 798 +T + +S + + + T Sbjct: 888 GTNVT-FRLSSGKTGEFDMSKLANSHWDHGYAMTVHAAQGKTAQNVFVHAETSRESLLNT 946 Query: 799 NATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKS 858 ++R+ V LY+ E + + +++ ++ E L+ I Sbjct: 947 EQFYVQISRAKDRVYLYTDSKE-GLVRAVEQRSGQKQTAKESSYQSLEP-LDHLIDKLWQ 1004 Query: 859 ALHTPAQQAIHLALPVVESKK 879 + + +++ V+ ++ Sbjct: 1005 --YPESGRSLEQLADRVQERE 1023 Score = 316 bits (808), Expect = 7e-84, Method: Composition-based stats. Identities = 146/732 (19%), Positives = 277/732 (37%), Gaps = 89/732 (12%) Query: 841 KTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTG 900 +++A +LE + A +A+ A+ + + +++ DL+ EA +A Sbjct: 297 QSQANLPTLEMKTEALLERVKV-ANEAVMWAIEHLGERDTSWTHHDLVKEASRYAGSRVL 355 Query: 901 FTELGGEINAQIKRGDLLYVDVAKGYGTGL-------LVSRASYEAEKSILRHILEGKEA 953 +++ I+A I G L+ V S+A+ + E +L+ G++ Sbjct: 356 LSDVNNAIDAAIGSGQLIDKSVRTFDKVSKREIDVRGYTSKAAIDIEDEVLKEEYLGRDR 415 Query: 954 VMPLMERVPG------------ELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQ 1001 V L R E + + QR AT IL + +R VQG+AG KTT Sbjct: 416 VQALCSREQAAAAISNAEEKANEFGYEWNADQRKATEGILLSENRIIGVQGFAGTAKTT- 474 Query: 1002 FRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRS-AGVDAQTLASFLHDTQLQQRSGETP 1060 +V+ V V GL PT+ A + AG+ + T+ SFL + + Sbjct: 475 --SVLRTVAETARDMGYEVRGLTPTNSAGQSLIDGAGIQSGTIQSFLAQNRNEWVQERKT 532 Query: 1061 DFSNTLF--------------LLDESSMVGNTDMARAYA--LIAAGGGRAVASGDTDQLQ 1104 +DE + V + + Y L R+ G+ D L Sbjct: 533 HTQIDKIDKRLEQIEKALSNPYVDEKTGVRIPENSPLYQKRLDELQYERSELQGERDGL- 591 Query: 1105 AIAPGQPFR------LQQTRSAADVAIMKEIVRQTPE------LREAVYSLINRDVERAL 1152 G+ + S +M++++++ + L V L + + A Sbjct: 592 ----GKMLEKTPQLWIVDESSMVGTKLMRDLLQRAGQSGARVVLTGDVRQLASVEAGAAF 647 Query: 1153 S-----GLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGE-------- 1199 G+E+ ++ RQ + + L+ ++ E Sbjct: 648 RQLQNHGMETYHLEEIVRQTNRGTRDAVYLSLMKNASHALSRLEESGSTIKEVVSHKKNG 707 Query: 1200 --AFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKE 1257 + +V DY P+ R +++I+ E RR N ++ + +K G LG E Sbjct: 708 KIDHEKSGEARRQELVTDYMALAPQERAKSIILEPSREGRRRTNELVREALKKEGALG-E 766 Query: 1258 QVMVPVLNTANIRDGELRRLSTWETHRDALV--------LVDNVYHRIAGISKDDGLITL 1309 ++ + L+ + + E R +++++ + + +Y+++ G +D L+ Sbjct: 767 ELRINQLSPVDATEAERRVVTSYQNGQIVRFARSFKREGIKKGLYYQVVGRDNNDILLKK 826 Query: 1310 QDAEGNTRLI--SPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAV 1367 A LI SP A+ + ++ + G+ + + +D+ G + N TV + Sbjct: 827 FGANEQAELIRFSPERYAAKNIQMFNLTESGLAVGETIVWRDNDKPTGRLNNDTATVEKI 886 Query: 1368 SGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMA 1427 G +VT + A H D YA+T H AQG + E +R+ + Sbjct: 887 EGTNVTFRLSSGKTGEFDMSKLANSHWDHGYAMTVHAAQGKTAQNVFV--HAETSRESLL 944 Query: 1428 GFESAYVALSRMKQHVQVYTDNRQGWTDAIN-NAVQKGTAHDVFEPKPDREVMNAERLFS 1486 E YV +SR K V +YTD+++G A+ + QK TA + + ++L+ Sbjct: 945 NTEQFYVQISRAKDRVYLYTDSKEGLVRAVEQRSGQKQTAKESSYQSLEPLDHLIDKLWQ 1004 Query: 1487 ---TARELRDVA 1495 + R L +A Sbjct: 1005 YPESGRSLEQLA 1016 >UniRef50_A0B527 TrwC protein n=3 Tax=Burkholderiales RepID=A0B527_BURCH Length = 964 Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats. Identities = 208/965 (21%), Positives = 360/965 (37%), Gaps = 139/965 (14%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGS--MGERWAGRGAEQLGLQGSVDKDVFTRLLEG 58 MMS+ V SAG A +Y++ KDNYY W G+GA LGL G VD++VF +LL G Sbjct: 1 MMSMHNVGSAGQALHYFS-KDNYYTTDQGLEHSAWFGKGAATLGLNGQVDRNVFFKLLSG 59 Query: 59 RLPDGADLSRMQDGSNR-----HRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFA 113 ++ D L R+ N HRPG DLTFSAPKSVS+ A + D+ + AH +AV A Sbjct: 60 QVGD-QQLGRVVLDENGEPEVVHRPGIDLTFSAPKSVSIAAEVFEDREVRLAHEEAVKEA 118 Query: 114 VRQVEAL-ASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH-NGE 171 + VEA A R DGQ+ TGN+V ALF H+TSRD +P HTHA+V N TQ +GE Sbjct: 119 LEYVEAYVARARKTVDGQTLVEPTGNVVAALFRHNTSRDLDPDTHTHALVMNATQRADGE 178 Query: 172 WKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP- 230 W++L++D +Y Q G +Y L ++ GY ++G +E+ GV Sbjct: 179 WRSLTND---------ELYVQQKVIGAIYTSSLARGLQKRGYAITAPDENGNFELVGVTR 229 Query: 231 --VEAFSGRSQTIREAVG------EDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLK 282 +E FS RS + +A+ ++ A L TR+ K VD E +W + + Sbjct: 230 EQIEHFSQRSAARDRWLRANGIDPANATAAEKERAVLATRERKVGVDHEALSVQWRERAQ 289 Query: 283 ETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLAR 342 G D + A + + T A +A+ A + L ER++ D++ Sbjct: 290 AVGLDYSVIQQKAREAREAGT----DARVVKLSGIEALRFAASHLGEREIVLNQYDLVQT 345 Query: 343 TVGILPPE---NGVIERARAGI---------DEAISREQLIPLDREKGLFT-SGIHVLDE 389 + N +++ + + D I+ E+++ +R + V Sbjct: 346 ALEHAVGRTSPNQILDAYKKLVHQGKIVDLPDGNITTEKMLNTERWTVENALAQRDVTPA 405 Query: 390 LSVRALSRDIMKQNRVTVHPEKSVP---RTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQR 446 ++ L R ++Q T E++ P T G A+ R + V G G G+ Sbjct: 406 IAPAELVRSRIEQAIATARAERNDPTFDYTPGQRGAIEHALTGRDRIVAVQGLAG-VGKT 464 Query: 447 ERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELIT--------GRRQLLEGMA 498 V V +A EQG V+ +AA ++ ++ D + + +T + L Sbjct: 465 TMVKGTVQVAHEQGWLVRGMAATGQAAKQLENDSGIQADTVTMFEIHEQRRQDDLKVLRE 524 Query: 499 FTPG-----STVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSG---QRTGTGSALMAM 550 + P +VD+ L+ ++ L A R + +V++ Q G + Sbjct: 525 YVPDLSRERELWLVDESSFLAQRQMARLFKMAERADAKVILLGDRLQLQAIEAGKPFEIL 584 Query: 551 KDAGVNTYRWQGGE-----------------------------------------QRPAT 569 +D GV T + + ++ Sbjct: 585 QDEGVATAQMTQIQRQKNPELQQAVAITVGTADLAPDEPLTDLNLARNARAFDFLEQAGR 644 Query: 570 IISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLG-LPE 628 + D +A + +++ ++ + A+R+EL+ +G L Sbjct: 645 VTEHEDPRDLIDLMARQYVDRGPRRNQTIIITPFNEDRVEINNAVRAELQERGELDVNDS 704 Query: 629 VTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETR----SHDRYVIDRVTAQSHSLTLR 684 S + + Y M + + + + + LR Sbjct: 705 AHTIFRSDGDMTRAKQKEAQYYTKDMTVRFGRDYQKILASRGEYMRVVGTRPDEGIVVLR 764 Query: 685 DAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDA 744 + G + ++ E +A + +R T V G V SV+E+ Sbjct: 765 KSDGSLMEWEPKKYN-RVEVYLSETRNLAARDVIRFTRGDEL--VKNGHEATVVSVNENQ 821 Query: 745 MTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVF--------------- 789 + + E +P G + + Sbjct: 822 AVLRLADGKE---IPWDLDAQRHWDHAYAVTVHAGQGATREQAMLHIPSHKMERDPEDAR 878 Query: 790 ------ASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTR 843 +V ++ D + GL R+ D++++++ A + + + Sbjct: 879 RQSDVAMTVRRIFGDRSFYVGLTRAVEDLQIFTTDAILARAAVSRHQDKSSAIETLREHE 938 Query: 844 AGETS 848 GE + Sbjct: 939 LGEQA 943 Score = 352 bits (903), Expect = 6e-95, Method: Composition-based stats. Identities = 149/695 (21%), Positives = 270/695 (38%), Gaps = 102/695 (14%) Query: 839 QIKTRAGETSLETAISHQKSALHTPAQ-----------QAIHLALPVVESKKLAFSMVDL 887 Q + RA L+ ++ QK+ A +A+ A + +++ + DL Sbjct: 283 QWRERAQAVGLDYSVIQQKAREAREAGTDARVVKLSGIEALRFAASHLGEREIVLNQYDL 342 Query: 888 LTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHI 947 + A A T ++ + +G ++ + G + + E+ + + Sbjct: 343 VQTALEHAVGRTSPNQILDAYKKLVHQGKIVDLP------DGNITTEKMLNTERWTVENA 396 Query: 948 LEGKEAVMPLMERV----------------PGELMEKLTSGQRAATRMILETSDRFTVVQ 991 L ++ + + T GQR A L DR VQ Sbjct: 397 LAQRDVTPAIAPAELVRSRIEQAIATARAERNDPTFDYTPGQRGAIEHALTGRDRIVAVQ 456 Query: 992 GYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMR-SAGVDAQTLASFLHDT 1050 G AGVGKTT + + + + V G+ T +A ++ +G+ A T+ F Sbjct: 457 GLAGVGKTTMVKGTVQVAHE----QGWLVRGMAATGQAAKQLENDSGIQADTVTMFEIHE 512 Query: 1051 QLQQRSGE-------TPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQL 1103 Q +Q + L+L+DESS + MAR + + + + GD QL Sbjct: 513 QRRQDDLKVLREYVPDLSRERELWLVDESSFLAQRQMARLFKMAERADAKVILLGDRLQL 572 Query: 1104 QAIAPGQPFRLQQTRSAADVAIMKEIVRQT-PELREAVYSLINRDVERALSGLESVKPSQ 1162 QAI G+PF + Q A A M +I RQ PEL++AV Sbjct: 573 QAIEAGKPFEILQDEGVA-TAQMTQIQRQKNPELQQAVA--------------------- 610 Query: 1163 VPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPE 1222 + AP+ +T+ + ++ A+ + ++A E + P L + + R Y R P Sbjct: 611 ITVGTADLAPDEPLTDLNLARNARAFDFLEQAGRVTE--HEDPRDLIDLMARQYVDRGPR 668 Query: 1223 AREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNT-ANIRDGELRRLSTWE 1281 R QT+I+T NEDR +N+ + ++ GEL + + ++ + + + Sbjct: 669 -RNQTIIITPFNEDRVEINNAVRAELQERGELDVNDSAHTIFRSDGDMTRAKQKEAQYYT 727 Query: 1282 T------HRDA--LVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYT 1333 RD ++ Y R+ G D+G++ L+ ++G+ P++ V +Y Sbjct: 728 KDMTVRFGRDYQKILASRGEYMRVVGTRPDEGIVVLRKSDGSLMEWEPKK--YNRVEVYL 785 Query: 1334 PDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQH 1393 +T + D +RFT+ D TV +V+ + L P A++H Sbjct: 786 SETRNLAARDVIRFTRGDE--LVKNGHEATVVSVNENQAVLRLADGKEI--PWDLDAQRH 841 Query: 1394 IDLAYAITAHGAQGASETFA-IALEGTEGNR---------------KLMAGFESAYVALS 1437 D AYA+T H QGA+ A + + + R + + G S YV L+ Sbjct: 842 WDHAYAVTVHAGQGATREQAMLHIPSHKMERDPEDARRQSDVAMTVRRIFGDRSFYVGLT 901 Query: 1438 RMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEP 1472 R + +Q++T + A++ K +A + Sbjct: 902 RAVEDLQIFTTDAILARAAVSRHQDKSSAIETLRE 936 >UniRef50_B8HZ01 Conjugative relaxase domain protein n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HZ01_CYAP4 Length = 1665 Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats. Identities = 193/934 (20%), Positives = 344/934 (36%), Gaps = 109/934 (11%) Query: 1 MMSIAQVRSAGSAG-NYYTDKD-------NYYVLGSMGER-----------WAGRGAEQL 41 M S+ + S +YYT + +YY + W G+GA +L Sbjct: 1 MRSLHTITSGHQEKEDYYTQDESLCDGQADYYGQSAQSTTESSVQSLTQALWYGKGAARL 60 Query: 42 GLQGSVDKDVFTRLLEGRLPDGADLSR--MQDGSNRHRPGYDLTFSAPKSVSMMAMLGGD 99 GL G V + F + G P G + R + + R +DLT SAPKSVSM LGGD Sbjct: 61 GLVGIVQRQDFQSVFYGDQPGGQERIRGERPNPDTKERLAHDLTLSAPKSVSMTLHLGGD 120 Query: 100 KRLIDAHNQAVDFAVRQVE-ALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHT 158 +RL AH +AV + VE A TRV DG+ + TG+L+ A+ H TSR+ + QLH Sbjct: 121 ERLFQAHLEAVQETLDLVESRYAQTRVQIDGERRVMRTGHLIAAILPHHTSREGDLQLHC 180 Query: 159 HAVVANVT-QHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETE- 216 H V+ N T +G W++L + N G YR +L ++V+ LGY + Sbjct: 181 HCVLMNGTFCPDGNWRSLWHEG----------MVNAEWLGSYYRLRLAQKVQDLGYAIDE 230 Query: 217 -VVGKHGMWEMPGVP---VEAFSGRSQTIREAVGED---ASLKSRDVAALDTRKSKQ-HV 268 + + G +E+ G +EAFS RS+ I + + + +RD A L TRK+KQ Sbjct: 231 TRLEQGGAFEIQGYSREAIEAFSKRSRQIVAYLEQHRQCVNSATRDGAVLTTRKAKQMEG 290 Query: 269 DPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLS 328 E A W G + + ++ + AI LS Sbjct: 291 TLEDYQARWRLEANVLGIN------------AVLPQAQPVTLYGYGTAREELASAIRHLS 338 Query: 329 ERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLD 388 ER V F+ D+ + + + I + A I E ++ LIP+ + G FT+ + Sbjct: 339 ERSVSFSREDLYSSVFDRI--QAFDIAQLDAVIAE---QKDLIPV--QGGRFTTVTALER 391 Query: 389 ELSVRALSRDIMKQNRVTVHPEKS------VPRTAGYSDAVSVLAQDRPSLAIVSGQGGA 442 E++ + + + +G + A++ + I+ G G Sbjct: 392 EITTLRDWMQGQGKTTPLMDETTAQALLERSALNSGQATAIAGIVSAGDQHLILHGLSG- 450 Query: 443 AGQRERVAELVMMAREQG--REVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFT 500 G+ + EL + +E +++ + + + Q L T +L+ Sbjct: 451 VGKTTALRELKRLIQESDSKPDIRGYSPTIAAAATLAQS--LQISTSTVESLVLKPPEPL 508 Query: 501 PGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITD---SGQRTGTGSALMAMKDAGVNT 557 I+D+ +S ++ +L A ++L+ GS + ++ G T Sbjct: 509 ADQLWIIDEAGMISARQMAIILKKANAVGARLLLVGDPRQNPAIEAGSPMRSLIQHGATT 568 Query: 558 Y------RWQGGEQRPAT--------------------IISEPDRNVRYARLAGDFAASV 591 + R Q QR A + D R +A + Sbjct: 569 FSLREIIRQQNAVQRRAVELMATGHPVHALSLLTEHGYVQEISDPQARSQAIAHQWLTLS 628 Query: 592 KAGEESVAQVSGVR-EQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMY 650 + ++ V+G E+ + Q +R L+ + LG ++ L L + + + Y Sbjct: 629 DSERQNTLIVTGTNAERRAIHQQLRRGLRDEEGLGEDQL-FRQLINRQLTTEQKLRWENY 687 Query: 651 RPGMVMEQWNPETRS--HDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPE 708 R G + + + V + L + G + +F+ Sbjct: 688 RVGDYIRLHRNYESTLLGKGRLYQVVGIRDRQLLVESEGGRLLWFDPARY-RDKEVFKTG 746 Query: 709 KMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTAL 768 ++ +A GE+LR T G ++ V +++D +TVV E Sbjct: 747 EIAIAPGEQLRWTLTDRKTGQINGSQVSVREINDDHLTVVDDQGQEWRINGRLPLTLDYA 806 Query: 769 KLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLA 828 + + + ++ V A+ + ++R R++++Y D E + Sbjct: 807 HVTTAY--SAQGLTAERVIVSATNNPTSAQEPFYVKISRQVRELQIYV-EDLEGLREWVG 863 Query: 829 RHPSFTVVSEQIKTRAGETSLETAISHQKSALHT 862 R + E I + + + Sbjct: 864 RSVAQMNPLELIGGHDVKRERQFGATGAHDEPEA 897 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 184/910 (20%), Positives = 334/910 (36%), Gaps = 106/910 (11%) Query: 864 AQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVA 923 A++ + A+ + + ++FS DL + + +L I Q DL+ V Sbjct: 326 AREELASAIRHLSERSVSFSREDLYSSVFD-RIQAFDIAQLDAVIAEQ---KDLIPVQG- 380 Query: 924 KGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEK---LTSGQRAATRMI 980 G + + E E + LR ++G+ PLM+ + + + L SGQ A I Sbjct: 381 -----GRFTTVTALEREITTLRDWMQGQGKTTPLMDETTAQALLERSALNSGQATAIAGI 435 Query: 981 LETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM-RSAGVD 1039 + D+ ++ G +GVGKTT R + + +P + G PT A + +S + Sbjct: 436 VSAGDQHLILHGLSGVGKTTALRELKRLIQE--SDSKPDIRGYSPTIAAAATLAQSLQIS 493 Query: 1040 AQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGD 1099 T+ S + ++ L+++DE+ M+ MA A G R + GD Sbjct: 494 TSTVESLVLKPP--------EPLADQLWIIDEAGMISARQMAIILKKANAVGARLLLVGD 545 Query: 1100 TDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVK 1159 Q AI G P R A ++ + I +Q R AV + ALS L Sbjct: 546 PRQNPAIEAGSPMRSLIQHGATTFSLREIIRQQNAVQRRAVELMATGHPVHALSLL---- 601 Query: 1160 PSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGR 1219 TE + QE P +AI + Sbjct: 602 -----------------TEHGYVQEI-----------------SDPQARSQAIAHQWLTL 627 Query: 1220 TPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLST 1279 + R+ TLIVT N +RR ++ + LG++Q + L + + R Sbjct: 628 SDSERQNTLIVTGTNAERRAIHQQLRRGLRDEEGLGEDQ-LFRQLINRQLTTEQKLRWEN 686 Query: 1280 WETHRDALVLVDNVYHRIAGISKDDGLITLQD-----AEGNTRLISPREAVAEGVTLYTP 1334 + D + L N + G + ++ ++D RL+ A ++ Sbjct: 687 YRVG-DYIRLHRNYESTLLGKGRLYQVVGIRDRQLLVESEGGRLLWFDPARYRDKEVFKT 745 Query: 1335 DTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHI 1394 I + G+++R+T +DR+ G + S +V ++ D +T+ D Q G+ + Sbjct: 746 GEIAIAPGEQLRWTLTDRKTGQINGSQVSVREINDDHLTVVDDQGQEWRINGRLPLT--L 803 Query: 1395 DLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWT 1454 D A+ TA+ AQG + I + E YV +SR + +Q+Y ++ +G Sbjct: 804 DYAHVTTAYSAQGLTAERVIV----SATNNPTSAQEPFYVKISRQVRELQIYVEDLEGLR 859 Query: 1455 DAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPAR 1514 + + +V + ++ + ER F + AG+ + L+GG+ + Sbjct: 860 EWVGRSVAQMNPLELIGGHD----VKRERQFGATGAHDEPEAGQPDRPEQNLSGGEHSLK 915 Query: 1515 FIAP-GRKYPQPY-------VALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGEGRVKGS 1566 A +Y P+ V+ P +G++ + G G G G R Sbjct: 916 VDAGLEPQYRPPHHATGTSDVSRPVPRGSGEAEAFGDVRCDSSTGFGSEGIEGPDRPFSI 975 Query: 1567 GDAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPGAITGGRVWG 1626 + + + + R + G V G P T G+ Sbjct: 976 DRYPDQLVPQPDPSRNQCVNPLLIQQRFDQIAQQMGAVF----PGNPETSLNATFGQ--- 1028 Query: 1627 DIPDNSVQPGAGNGEPVTAEVLAQRQAE-EAIRRETERRADEIVRKM--AENKPDLPDGK 1683 + A E + E L Q + E ER + ++++ L + Sbjct: 1029 -SHYRGLAEFAQELEYLGEEDLCQTLQDITHALVEVERCLERSLQQVKLDTITDALQSWR 1087 Query: 1684 TEQAVREIAGQERDRAAITEREAALPEGVL--REPQRVREAVREIARENLLQERLQ--QM 1739 +EQA+ E Q A + +A P+ ++ Q VR+ + L ER++ Q Sbjct: 1088 SEQALSEAIAQ----IATVQAQAEEPDSLILGTVLQEVRKLPYRREEVDHLVERVEEWQA 1143 Query: 1740 ERDMVRDLQK 1749 E+D+ L++ Sbjct: 1144 EQDLSAVLEQ 1153 >UniRef50_A4LST4 TrwC protein n=10 Tax=Proteobacteria RepID=A4LST4_BURPS Length = 991 Score = 433 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 206/983 (20%), Positives = 378/983 (38%), Gaps = 152/983 (15%) Query: 1 MMSIAQVRSAGS--AGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEG 58 M++ +R A +Y++ D+YY + W G GA+ LGL G V++ +RLL+G Sbjct: 1 MLNATLIRGNNQYAAAHYFSAADDYYAKEN-PGEWQGDGAQALGLAGPVEQVQLSRLLDG 59 Query: 59 RLPDGADLSRMQDGS-NRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQV 117 +LP+G + D + N+ R G DLTFSAPKSVSM A++ GDK + AH++AV A+ QV Sbjct: 60 QLPNGERIQTTFDPTDNKKRMGLDLTFSAPKSVSMQALVAGDKDVTAAHDRAVTRALEQV 119 Query: 118 EALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH-NGEWKTLS 176 E LA R G+S TGN+V+ F H+ SR ++PQLHTH+VV N+T+ +G W+ LS Sbjct: 120 EQLAEARKKVKGKSYRERTGNMVIGKFRHEMSRAKDPQLHTHSVVLNMTRRADGMWRALS 179 Query: 177 SDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP---VEA 233 + E+++ + Y+ +L ++ LGY+ VV G +E+ + +EA Sbjct: 180 N---------EDIFRAKKTIDATYQAELARGLQELGYQIRVVDDRGNFELAHISRDQIEA 230 Query: 234 FSGRSQTIREAVGED------ASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFD 287 FS RS+ I EA+ + A+ + V +L TR K D EI W++ +E G D Sbjct: 231 FSARSRVIEEALANEGKTRATATTLEKQVISLATRPRKDESDREIVKQYWVEKSRELGID 290 Query: 288 IRAYRDAADQRADLRTLTPGPASQDGPDVQQA----------------VTQAIAGLSERK 331 R D R + G D D + V AI+ L+ER+ Sbjct: 291 YGP-RSQLDGRTYETGDSFGGRGWDRGDADDSIVAVSLPASLTPAQAVVQYAISHLTERE 349 Query: 332 VQFTYT----------------DVLARTVGILPPENGVIERARA---------------- 359 T D + + L + ++E A Sbjct: 350 AVVRETALTATALRRAVGLAGADEVRAEIKRLIGQGTLVEAVPAYRMAERMDGPVLSSAG 409 Query: 360 ------------------GIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMK 401 + AI R L+P ++ +T+ + E ++ A+ R Sbjct: 410 WECFLRELKGWTEKEAHTYVGHAIKRGSLVPAEK---RYTTQKALAREKAILAIERTGRG 466 Query: 402 ------QNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMM 455 +S AG AV + + G G G+ V + V + Sbjct: 467 AVAPILTAAAVKTALESSTLNAGQRSAVETIVATSNRFVGIQGDAG-TGKTYTVNQAVAL 525 Query: 456 AREQ-----GREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGSTVIVDQG 510 ++ G +A +K + + L + R + + +++D+ Sbjct: 526 IKQASAVSEGYRTVALAPYGNQVKALKNEGLEAHTLASFLR--TKDKPIDGKTIIVLDES 583 Query: 511 EKLSLKETLTLLDGAARHNVQVLITDSGQRT---GTGSALMAMKDAGVNTYRWQGGEQRP 567 + ++ L+ + ++++ ++T G ++ G+ T R +++ Sbjct: 584 GVVGARQMEQLMRTVEKAGARMVMIGDTKQTEAIEAGKPFAQLQHDGMQTARISEIQRQK 643 Query: 568 -----------------------ATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGV 604 + + R+ + D+ + V+G Sbjct: 644 DHELKTAVEHAAEGRVTQSLAHLKHVEELKEPIERHRAIVNDYIGLTETDRRDTLIVAGT 703 Query: 605 RE-QAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPET 663 E + + + +R L L L+ V + R Y+PGMV++ Sbjct: 704 NEARREINRMVRESL----ELAGNGREFETLTRVDMTQAQRRFAPSYQPGMVIQPEKDYQ 759 Query: 664 R----SHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLR 719 + + Y + ++L L G T + + S++ E+ ++ G+ +R Sbjct: 760 KAGLTRGETYRVKE-ALPGNALVLERQDGTTATINPRK-ATQLSVYHLERAELSVGDTVR 817 Query: 720 VTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFT-ALKLENGWVETP 778 + PG ++ GDR++VA V + + + + + + P L LE + T Sbjct: 818 INRNDPGRDLTNGDRMRVAGVIGGVVKLESVEQRDGRPVRALELPTNRPLHLEYAYASTV 877 Query: 779 GHSV---SDSATVFASVTQMAMDNATLN-GLARSGRDVRLYSSLDET---RTAEKLARHP 831 S +D A + ++R+ + R+Y++ + A + + Sbjct: 878 HSSQGLTNDRALIALDTKSRTTSMNLYYVAISRARYEARVYTNSVKELPAAIARRFDKTT 937 Query: 832 SFTVVSEQIKTRAGETSLETAIS 854 + + E+ R G + Sbjct: 938 ALAIQRERELQRRGAGMQPKGTA 960 Score = 378 bits (970), Expect = e-102, Method: Composition-based stats. Identities = 160/676 (23%), Positives = 253/676 (37%), Gaps = 124/676 (18%) Query: 862 TPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVD 921 TPAQ + A+ + ++ L A A G E+ EI I +G L+ Sbjct: 332 TPAQAVVQYAISHLTEREAVVRETALTATALRRAVGLAGADEVRAEIKRLIGQGTLVEAV 391 Query: 922 VAKG--------------------------------------------YGTGLLVSRASY 937 A ++ + Sbjct: 392 PAYRMAERMDGPVLSSAGWECFLRELKGWTEKEAHTYVGHAIKRGSLVPAEKRYTTQKAL 451 Query: 938 EAEKSILRHILEGKEAVMPLMERVPGELM---EKLTSGQRAATRMILETSDRFTVVQGYA 994 EK+IL G+ AV P++ + L +GQR+A I+ TS+RF +QG A Sbjct: 452 AREKAILAIERTGRGAVAPILTAAAVKTALESSTLNAGQRSAVETIVATSNRFVGIQGDA 511 Query: 995 GVGKTTQFRAVMSAVNMLPE-SERPRVVGLGPTHRAVGEMRSAGVDAQTLASFLHDTQLQ 1053 G GKT ++ + SE R V L P V +++ G++A TLASFL Sbjct: 512 GTGKTYTVNQAVALIKQASAVSEGYRTVALAPYGNQVKALKNEGLEAHTLASFL------ 565 Query: 1054 QRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFR 1113 R+ + P T+ +LDES +VG M + + G R V GDT Q +AI G+PF Sbjct: 566 -RTKDKPIDGKTIIVLDESGVVGARQMEQLMRTVEKAGARMVMIGDTKQTEAIEAGKPFA 624 Query: 1114 LQQTRSAADVAIMKEIVRQTP-ELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAP 1172 Q A + EI RQ EL+ AV V ++L+ L+ V+ + P + Sbjct: 625 QLQ-HDGMQTARISEIQRQKDHELKTAVEHAAEGRVTQSLAHLKHVEELKEPIER----- 678 Query: 1173 EHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTH 1232 + AIV DY G T R TLIV Sbjct: 679 ------------------------------------HRAIVNDYIGLTETDRRDTLIVAG 702 Query: 1233 LNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDN 1292 NE RR +N M+ + EL L ++ + R +++ +V+ Sbjct: 703 TNEARREINRMVRESL----ELAGNGREFETLTRVDMTQAQRRFAPSYQPG---MVIQPE 755 Query: 1293 VYHRIAGISKDD----------GLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTG 1342 ++ AG+++ + + L+ +G T I+PR+A +++Y + + G Sbjct: 756 KDYQKAGLTRGETYRVKEALPGNALVLERQDGTTATINPRKATQ--LSVYHLERAELSVG 813 Query: 1343 DRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQT----REIRPGQEQAEQHIDLAY 1398 D +R ++D R V V G V L +Q H++ AY Sbjct: 814 DTVRINRNDPGRDLTNGDRMRVAGVIGGVVKLESVEQRDGRPVRALELPTNRPLHLEYAY 873 Query: 1399 AITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAIN 1458 A T H +QG + A+ T+ YVA+SR + +VYT++ + AI Sbjct: 874 ASTVHSSQGLTNDRALIALDTKS---RTTSMNLYYVAISRARYEARVYTNSVKELPAAIA 930 Query: 1459 NAVQKGTAHDVFEPKP 1474 K TA + + Sbjct: 931 RRFDKTTALAIQRERE 946 >UniRef50_Q2NKF7 TrwC protein n=6 Tax=Proteobacteria RepID=Q2NKF7_ECOLX Length = 966 Score = 431 bits (1107), Expect = e-118, Method: Composition-based stats. Identities = 207/955 (21%), Positives = 369/955 (38%), Gaps = 136/955 (14%) Query: 1 MMS--IAQVRSAGSAGNYYTD-KDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLE 57 M+S + + G A +YY D D+YY W G+GAE+LGL G VD F LL Sbjct: 1 MLSHMVLTRQDIGRAASYYEDGADDYYAKDGDASEWQGKGAEELGLSGEVDSKRFRELLA 60 Query: 58 GRLPDGADLSR-MQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQ 116 G + +G + R ++ R G DLTFSAPKSVS+ A++ GD +I AH++AV + Q Sbjct: 61 GNIGEGHRIMRSATRQDSKERIGLDLTFSAPKSVSLQALVAGDAEIIKAHDRAVARTLEQ 120 Query: 117 VEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH-NGEWKTL 175 EA A R G++ TGNLV+ F H+TSR+++PQLHTHAV+ N+T+ +G+W+ L Sbjct: 121 AEARAQARQKIQGKTRIETTGNLVIGKFRHETSRERDPQLHTHAVILNMTKRSDGQWRAL 180 Query: 176 SSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP---VE 232 +D + G +Y +L +++ LGY+ GK G +++ + +E Sbjct: 181 KND---------EIVKRTRYLGAVYNAELAHELQKLGYQLR-YGKDGNFDLAHIDRQQIE 230 Query: 233 AFSGRSQTIREAVGEDA------SLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGF 286 FS R++ I E SL+ + A + +R K VD E AEW T KE G Sbjct: 231 GFSKRTEQIAEWYAARGLDPNSVSLEQKQAAKVLSRAKKTSVDREALRAEWQATAKELGI 290 Query: 287 DIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDV----LAR 342 D + ++ D ++AV AI L+ER+ ++ + Sbjct: 291 DFSRREWSGREKGGSEKQAHSFMPSDEA-AKRAVRYAINHLTERQSVMDERELVDTAMKH 349 Query: 343 TVGILPPENGVIERARAG------------------------------------------ 360 VG E+ E R Sbjct: 350 AVGAARLEDIQKELLRQTETGYLIREAPRYRPGGQTGPTDEPGKTRAEWVAELAAKGMKQ 409 Query: 361 ------IDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMK------QNRVTVH 408 +D AI L+P++ +T+ + E + + RD Sbjct: 410 GAARERVDNAIKTGGLVPIEP---RYTTQTALEREKRILQIERDGRGAVAPVIAAEAARE 466 Query: 409 PEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAA 468 S G +A ++ + V G G G+ + M +G V+ +AA Sbjct: 467 RLASTNLNQGQREAAELIVSAANRVVGVQGFAG-TGKSHMLDTAKQMIEGEGYHVRALAA 525 Query: 469 DRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARH 528 +++ + L + R + + +++D+ + + L A + Sbjct: 526 YGSQVKALRELNVEANTLASFLR--AKDKNIDSRTVLVIDEAGVVPTRLMEQTLKLAEKA 583 Query: 529 NVQVLITDSGQRTG---TGSALMAMKDAGVNTYRWQGGE--------------------- 564 +V++ +T G ++ AG+ T + + Sbjct: 584 GARVVLMGDTAQTKAIEAGRPFDQLQAAGMQTAHMREIQRQKNPELKIAVELAAAGKASS 643 Query: 565 --QRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVRE-QAILTQAIRSELKTQ 621 +R + + + R A +A + A + VSG E + + Q +R L T Sbjct: 644 SLERIKDVTEIKNHHERRAAVAEAYIALKPDERDRTLIVSGTNEARREINQIVREGLGTA 703 Query: 622 GVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVME----QWNPETRSHDRYVIDRVTAQ 677 G + L V R Y+ G V++ + + Y + Sbjct: 704 GK----GIEFDTLVRVDTTQAERRHSKNYQVGHVIQPERDYAKTGLQRGELYRVVETGPG 759 Query: 678 SHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQV 737 + + + G+ + + S+++PE+ +A G+ +R+T L ++ GDR++V Sbjct: 760 NRLTVIGEHDGQRIQFSPMTH-TKISVYQPERAELAVGDTIRITRNDKHLDLANGDRMKV 818 Query: 738 ASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSV---SDSATVFASVTQ 794 +V + +TV R +D P L +++ + T S SD + A Sbjct: 819 VAVEDRKVTVTDGKRNVEL---PTDKP---LHVDHAYATTVHSSQGLTSDRVLIDAHAES 872 Query: 795 MAMDN-ATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETS 848 ++R+ + R++++ D + +AR + + + R G ++ Sbjct: 873 RTTRKDVYYVAISRARFEARVFTN-DRGKLPAAIARENIKSAAHDLARDRGGRSA 926 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 151/695 (21%), Positives = 249/695 (35%), Gaps = 123/695 (17%) Query: 842 TRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGF 901 E +H A++A+ A+ + ++ +L+ A A Sbjct: 297 WSGREKGGSEKQAHSFMPSDEAAKRAVRYAINHLTERQSVMDERELVDTAMKHAVGAARL 356 Query: 902 TELGGEINAQIKRGDLLYVDVAKGYG---------------------------------- 927 ++ E+ Q + G L+ G Sbjct: 357 EDIQKELLRQTETGYLIREAPRYRPGGQTGPTDEPGKTRAEWVAELAAKGMKQGAARERV 416 Query: 928 ------------TGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGEL---MEKLTSG 972 ++ + E EK IL+ +G+ AV P++ L G Sbjct: 417 DNAIKTGGLVPIEPRYTTQTALEREKRILQIERDGRGAVAPVIAAEAARERLASTNLNQG 476 Query: 973 QRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGE 1032 QR A +I+ ++R VQG+AG GK+ + E E V L V Sbjct: 477 QREAAELIVSAANRVVGVQGFAGTGKSHML----DTAKQMIEGEGYHVRALAAYGSQVKA 532 Query: 1033 MRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGG 1092 +R V+A TLASFL R+ + S T+ ++DE+ +V M + L G Sbjct: 533 LRELNVEANTLASFL-------RAKDKNIDSRTVLVIDEAGVVPTRLMEQTLKLAEKAGA 585 Query: 1093 RAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQT-PELREAVYSLINRDVERA 1151 R V GDT Q +AI G+PF Q + A M+EI RQ PEL+ AV + Sbjct: 586 RVVLMGDTAQTKAIEAGRPFDQLQA-AGMQTAHMREIQRQKNPELKIAVELAAAGKASSS 644 Query: 1152 LSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEA 1211 L ++ VTE + E + A Sbjct: 645 LERIKD------------------VTEIKNHHERR-----------------------AA 663 Query: 1212 IVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRD 1271 + Y P+ R++TLIV+ NE RR +N ++ + AG+ + L + Sbjct: 664 VAEAYIALKPDERDRTLIVSGTNEARREINQIVREGLGTAGK----GIEFDTLVRVDTTQ 719 Query: 1272 GELRRLSTWETHRDA--------LVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPRE 1323 E R ++ L +R+ + L + + +G SP Sbjct: 720 AERRHSKNYQVGHVIQPERDYAKTGLQRGELYRVVETGPGNRLTVIGEHDGQRIQFSP-- 777 Query: 1324 AVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREI 1383 +++Y P+ + GD +R T++D+ V AV VT++DG++ E+ Sbjct: 778 MTHTKISVYQPERAELAVGDTIRITRNDKHLDLANGDRMKVVAVEDRKVTVTDGKRNVEL 837 Query: 1384 RPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHV 1443 + H+D AYA T H +QG + + E + YVA+SR + Sbjct: 838 PTDKPL---HVDHAYATTVHSSQGLTSDRVLIDAHAES---RTTRKDVYYVAISRARFEA 891 Query: 1444 QVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREV 1478 +V+T++R AI K AHD+ + R Sbjct: 892 RVFTNDRGKLPAAIARENIKSAAHDLARDRGGRSA 926 >UniRef50_C5ANZ1 TrwC protein n=2 Tax=Burkholderia glumae BGR1 RepID=C5ANZ1_BURGB Length = 973 Score = 431 bits (1107), Expect = e-118, Method: Composition-based stats. Identities = 203/973 (20%), Positives = 353/973 (36%), Gaps = 148/973 (15%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGS--MGERWAGRGAEQLGLQGSVDKDVFTRLLEG 58 MMS+ V SAG A +Y++ KDNYY +W G+GA LGL G VD+ F LL G Sbjct: 1 MMSMHNVGSAGQALHYFS-KDNYYTTEQGLERSQWFGKGAAALGLDGQVDEKEFFELLSG 59 Query: 59 RLPDGADLSRMQDGSNR-----HRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFA 113 R+ G L R+ N HRPG DLTFSAPKSVS+ A + D ++ AH +AV A Sbjct: 60 RV-AGKQLGRVVRDDNGQPDWVHRPGIDLTFSAPKSVSIAAEVFEDHQVRLAHEEAVKEA 118 Query: 114 VRQVEAL-ASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH-NGE 171 + VE A R DG++ T TGN+V ALF H+TSRD +P HTHAV+ N T+ +G+ Sbjct: 119 LEYVEEYAAQARKTVDGETITEETGNIVAALFRHNTSRDLDPDTHTHAVILNATRREDGQ 178 Query: 172 WKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP- 230 W+ L++D +Y Q G +Y L ++ GY K+G +E+ GV Sbjct: 179 WRALTND---------ELYLQQKVIGAVYTASLARALQKRGYAITAPDKNGNFELVGVTR 229 Query: 231 --VEAFSGRSQTIREAVG------EDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLK 282 +E FS RS + +A+ ++ A L TR+ K+ VD + W + + Sbjct: 230 EQIEHFSQRSAARDRWLRANGIDPANATPAEKERAVLATRERKRDVDHGVLSQTWRERAQ 289 Query: 283 ETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLAR 342 G D A + A + + T A+ + A L ER++ D++ Sbjct: 290 SVGLDYGAIQAKAREAREAGTDARVVEMSGI----DALRFSAAHLGEREIVLNRYDMVKT 345 Query: 343 TVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDE------------- 389 + + + +++ L G T+ + E Sbjct: 346 AIEH-AVGRTSPAAILKAYGKLVEDGKIVNLPD--GNITTEKMLNTERWTVEQALSQQGK 402 Query: 390 ---LSVRALSRDIMKQNRVTVHPEKSVP---RTAGYSDAVSVLAQDRPSLAIVSGQGGAA 443 ++ + R + E++ P T G A+ + + V G G Sbjct: 403 TPAIAPLDVVRARIDHAIEAARAERNAPDFDYTTGQRAAIELALTSEDRIVAVQGLAG-V 461 Query: 444 GQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMA----- 498 G+ V V +A E+G V+ +AA ++ + + D ++ + +T + Sbjct: 462 GKTTMVKGTVQVAHERGYVVRGMAATGKAALQLAADGGINADTVTMFEIHEQRRQDDLKL 521 Query: 499 ---FTPG-----STVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSG---QRTGTGSAL 547 + P +VD+ L+ ++ L+ A R +V++ Q G Sbjct: 522 LHEYVPDMKREPELWLVDESSFLAQRQMARLIKMAERAEAKVILLGDKLQLQAIEAGKPF 581 Query: 548 MAMKDAGVNTYRWQGGEQRP---------------------------------------- 567 ++D G+ T +++ Sbjct: 582 EVLQDEGLTTALMTQIQRQRNPELQQAVAITVGTADLAPDEELTSLDLSRNARAFDFLEQ 641 Query: 568 -ATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGL 626 +I PD LA + E++ ++ + AIRS+L+ +G L Sbjct: 642 AGRVIEIPDGEQLVQNLARRYVERGDRRNETIIITPFNEDRVNINNAIRSQLQARGELDT 701 Query: 627 PEV-TMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETR----SHDRYVIDRVTAQSHSL 681 E S + + Y M + + + + + Sbjct: 702 QESDHTIFRSESEMTRAKQKEAQYYTTDMTVRFGRDYQKILAARGEYMTVVATRPDEGIV 761 Query: 682 TLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVS 741 LR A G + ++ E+ +A + +R T V G V S+ Sbjct: 762 VLRKADGSLMEWEPKKYN-RVEIYLSEERALAARDVIRFTRGDEL--VKNGHEATVVSIQ 818 Query: 742 EDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVF------------ 789 + + E +P G + + Sbjct: 819 GSQAILRLADGKE---IPWDLDAQRHWDHAYAVTVHAGQGATREQAILHIPSEKLGRDPD 875 Query: 790 ---------ASVTQMAMDNATLNGLARSGRDVRLYSSLDET---RTAEKLARHPSFTVVS 837 +V ++ D + G+ R+ D+++Y++ ET ++ + + + Sbjct: 876 DPRRQSDIAMTVRRIFGDRSFYVGITRAVDDLQIYTTGAETARWAVSQHQDKSSALQTLR 935 Query: 838 EQIKTRAGETSLE 850 E + + SL+ Sbjct: 936 EHEEAQLANPSLQ 948 Score = 342 bits (877), Expect = 8e-92, Method: Composition-based stats. Identities = 142/665 (21%), Positives = 251/665 (37%), Gaps = 91/665 (13%) Query: 867 AIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGY 926 A+ + + +++ + D++ A A T + ++ G ++ + Sbjct: 322 ALRFSAAHLGEREIVLNRYDMVKTAIEHAVGRTSPAAILKAYGKLVEDGKIVNLP----- 376 Query: 927 GTGLLVSRASYEAEKSILRHILEGKEAVMPLM----------ERVPGELMEK------LT 970 G + + E+ + L + + + E+ T Sbjct: 377 -DGNITTEKMLNTERWTVEQALSQQGKTPAIAPLDVVRARIDHAIEAARAERNAPDFDYT 435 Query: 971 SGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAV 1030 +GQRAA + L + DR VQG AGVGKTT + + + V G+ T +A Sbjct: 436 TGQRAAIELALTSEDRIVAVQGLAGVGKTTMVKGTVQVAHE----RGYVVRGMAATGKAA 491 Query: 1031 GEMR-SAGVDAQTLASFLHDTQLQQRSGET-----PDFSNT--LFLLDESSMVGNTDMAR 1082 ++ G++A T+ F Q +Q + PD L+L+DESS + MAR Sbjct: 492 LQLAADGGINADTVTMFEIHEQRRQDDLKLLHEYVPDMKREPELWLVDESSFLAQRQMAR 551 Query: 1083 AYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQ-TPELREAVY 1141 + + + GD QLQAI G+PF + Q A+M +I RQ PEL++AV Sbjct: 552 LIKMAERAEAKVILLGDKLQLQAIEAGKPFEVLQDE-GLTTALMTQIQRQRNPELQQAVA 610 Query: 1142 SLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAF 1201 + L S+ S+ R V E ++ Sbjct: 611 ITVGTADLAPDEELTSLDLSRNARAFDFLEQAGRVIEIPDGEQ----------------- 653 Query: 1202 PDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMV 1261 L + + R Y R + R +T+I+T NEDR +N+ I + GEL ++ Sbjct: 654 ------LVQNLARRYVERG-DRRNETIIITPFNEDRVNINNAIRSQLQARGELDTQESDH 706 Query: 1262 PVLNTAN-IRDGELRRLSTWET------HRDA--LVLVDNVYHRIAGISKDDGLITLQDA 1312 + + + + + + + T RD ++ Y + D+G++ L+ A Sbjct: 707 TIFRSESEMTRAKQKEAQYYTTDMTVRFGRDYQKILAARGEYMTVVATRPDEGIVVLRKA 766 Query: 1313 EGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSV 1372 +G+ P++ V +Y + + D +RFT+ D TV ++ G Sbjct: 767 DGSLMEWEPKK--YNRVEIYLSEERALAARDVIRFTRGDE--LVKNGHEATVVSIQGSQA 822 Query: 1373 TLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTE------------ 1420 L P A++H D AYA+T H QGA+ AI +E Sbjct: 823 ILRLADGKEI--PWDLDAQRHWDHAYAVTVHAGQGATREQAILHIPSEKLGRDPDDPRRQ 880 Query: 1421 ----GNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDR 1476 + + G S YV ++R +Q+YT + A++ K +A + Sbjct: 881 SDIAMTVRRIFGDRSFYVGITRAVDDLQIYTTGAETARWAVSQHQDKSSALQTLREHEEA 940 Query: 1477 EVMNA 1481 ++ N Sbjct: 941 QLANP 945 >UniRef50_Q9X4G2 Mobilization protein TraI n=10 Tax=root RepID=Q9X4G2_ECOLX Length = 1078 Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats. Identities = 210/992 (21%), Positives = 371/992 (37%), Gaps = 137/992 (13%) Query: 1 MMSIAQV--RSAGSAGNYYTD-KDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLE 57 M+ I + ++ S YY+D KD+YY S W G GAE LGL G V+ F LL Sbjct: 1 MLDITTITRQNVTSVVGYYSDAKDDYYSKDSSFTSWQGTGAEALGLSGDVESARFKELLV 60 Query: 58 GRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQV 117 G + + R + + R GYDLTFSAPK VSM A++ GDK +I+AH +AV AVR+ Sbjct: 61 GEIDTFTHMQRHVGDAKKERLGYDLTFSAPKGVSMQALIHGDKTIIEAHEKAVAAAVREA 120 Query: 118 EALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH-NGEWKTLS 176 E LA R G+S T T NLV+A F H+TSR +P LHTHA V N+TQ +G+W+ L Sbjct: 121 EKLAQARTTRQGKSVTQNTNNLVVATFRHETSRALDPDLHTHAFVMNMTQREDGQWRALK 180 Query: 177 SDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP---VEA 233 +D + N++ G +Y+++L ++ GYE K+ ++M + A Sbjct: 181 ND---------ELMRNKMHLGDVYKQELALELTKAGYELRYNSKNNTFDMAHFSDEQIRA 231 Query: 234 FSGRSQTIREAVG------EDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFD 287 FS RS+ I + + E A +++ ++ TR+ K E EW K G D Sbjct: 232 FSRRSEQIEKGLAAMGLTRETADAQTKSRVSMATREKKTEHSREEIHQEWASRAKTLGID 291 Query: 288 IRAYR---DAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLART- 343 AD+ + +A+ A+ LSER F ++ Sbjct: 292 FDNREWQGHGKPLEADIARNMAPDFTSPEVKADRAIQFAVKSLSERDASFERQKLIQIAN 351 Query: 344 ----------------------------------------------------VGILPPEN 351 + L Sbjct: 352 KQVLGHATIADVEKAYLKAVQKGAIIEGEARYQSTLKVGASVMAETLTRKEWIDSLTNSG 411 Query: 352 GVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEK 411 ++AR +D+ I + L + T+ + E S+ + Q + E Sbjct: 412 MRADKARFAVDDGIKNGR---LKKTSHRVTTVEGIRLERSILTIESRGRGQMPRQLTAEI 468 Query: 412 SVPRTAG------YSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQI 465 + +G AV+ + + G G G+ + QG +V Sbjct: 469 AGQLLSGKTLKKEQMRAVTEIVTSKDRFVAAHGYAG-TGKSYMTMAAKELLESQGLKVTA 527 Query: 466 IAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGA 525 +A + + +D+ L + + + S V +D+ + ++ L++ Sbjct: 528 LAPYGTQKKAL-EDDGLPARTVAAFLKAKDK-KLDEKSVVFIDEAGVIPARQMKQLMEVI 585 Query: 526 ARHNVQVLITDSGQRTG---TGSALMAMKDAGVNTYRWQGGEQRPATIISE--------- 573 +HN + + +T G + AG+ T + +++ ++ E Sbjct: 586 EKHNARAVFLGDTSQTKAVEAGKPFEQLIKAGMQTSYMKDIQRQKNEVLLEAVKYAAEGN 645 Query: 574 --------------PDRNVRYARLAGDFAASVKAGEESVAQVSGVRE-QAILTQAIRSEL 618 + R A+LA + + +++ +SG + L IR L Sbjct: 646 AARALKNITGVNELKEEAPRLAQLADRYLSLSSEQQDATLIISGTNASRKTLNDYIRGNL 705 Query: 619 KTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVM---EQWNPETRSHDRYVIDRVT 675 L T T L V R + G ++ + + + + Y + T Sbjct: 706 ----GLAGTGETFTLLDRVDSTQAERRDSRYFSKGQIIIPEQDYKNGMKRGESYQVLD-T 760 Query: 676 AQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRL 735 + LT+ GE + + S+++ +A G+++ VT L V+ GDR Sbjct: 761 GPGNKLTVESISGEQIAFSPRTH-TKLSVYQAVSAELAPGDKVMVTRNDKTLDVANGDRF 819 Query: 736 QVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQ- 794 V +V + +T+ + T+ + + L ++ +F T+ Sbjct: 820 TVKTVEGEKLTLED---KKGRTVELDKKQASYLSYAYATTVHKSQGLTCDRVLFNIDTKS 876 Query: 795 -MAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAI 853 + G++R+ +V +++ D+ A ++R T +E I G + I Sbjct: 877 LTTSKDVFYVGISRARHEVEIFTD-DKKSLASSVSRDSPKTTAAE-IDRFFGLEARFKDI 934 Query: 854 SHQKSALHTPAQQAIHLALPVVESKKLAFSMV 885 S A++ LP + +AF+ Sbjct: 935 GRDTSLETRSAEK----GLPEATGESMAFNQK 962 Score = 352 bits (903), Expect = 7e-95, Method: Composition-based stats. Identities = 140/862 (16%), Positives = 295/862 (34%), Gaps = 139/862 (16%) Query: 673 RVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGG 732 VT +++L + + ET L + + + DG + R +R Sbjct: 134 SVTQNTNNLVVATFRHETSRALDPDLHTHAFVMNMTQRE--DG-QWRALKNDELMR---- 186 Query: 733 DRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVS--DSATVFA 790 +++ + V + + + + ++ F + + + Sbjct: 187 NKMHLGDVYKQELALELTKAGYELRYNSKNNTFDMAHFSDEQIRAFSRRSEQIEKGLAAM 246 Query: 791 SVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEK-LARHPSFTVVSEQIKTRAGETSL 849 +T+ D T + ++ + R+ + + ++ +R + + + + + L Sbjct: 247 GLTRETADAQTKSRVSMATREKK--TEHSREEIHQEWASRAKTLGIDFDNREWQGHGKPL 304 Query: 850 ETAISHQ----KSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELG 905 E I+ ++ A +AI A+ + + +F L+ A ++ Sbjct: 305 EADIARNMAPDFTSPEVKADRAIQFAVKSLSERDASFERQKLIQIANKQVLGHATIADVE 364 Query: 906 GEINAQIKRGDLLYVDVAKG---------------------------------------- 925 +++G ++ + Sbjct: 365 KAYLKAVQKGAIIEGEARYQSTLKVGASVMAETLTRKEWIDSLTNSGMRADKARFAVDDG 424 Query: 926 -------YGTGLLVSRASYEAEKSILRHILEGKEAV-MPLMERVPGELM--EKLTSGQRA 975 + + + E+SIL G+ + L + G+L+ + L Q Sbjct: 425 IKNGRLKKTSHRVTTVEGIRLERSILTIESRGRGQMPRQLTAEIAGQLLSGKTLKKEQMR 484 Query: 976 ATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRS 1035 A I+ + DRF GYAG GK+ A + ES+ +V L P + Sbjct: 485 AVTEIVTSKDRFVAAHGYAGTGKSYMTMAAKELL----ESQGLKVTALAPYGTQKKALED 540 Query: 1036 AGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAV 1095 G+ A+T+A+FL ++ + ++ +DE+ ++ M + +I RAV Sbjct: 541 DGLPARTVAAFL-------KAKDKKLDEKSVVFIDEAGVIPARQMKQLMEVIEKHNARAV 593 Query: 1096 ASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPE-LREAVYSLINRDVERALSG 1154 GDT Q +A+ G+PF ++ + MK+I RQ E L EAV + RAL Sbjct: 594 FLGDTSQTKAVEAGKPFEQLI-KAGMQTSYMKDIQRQKNEVLLEAVKYAAEGNAARALKN 652 Query: 1155 LESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVR 1214 + V + + Sbjct: 653 ITGVNELK-----------------------------------------EEAPRLAQLAD 671 Query: 1215 DYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGEL 1274 Y + E ++ TLI++ N R+ LN I L +L+ + E Sbjct: 672 RYLSLSSEQQDATLIISGTNASRKTLNDYIRGNLG----LAGTGETFTLLDRVDSTQAER 727 Query: 1275 RRLSTWETHRDAL-------VLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAE 1327 R + + + + +++ +T++ G SPR Sbjct: 728 RDSRYFSKGQIIIPEQDYKNGMKRGESYQVLDTGPG-NKLTVESISGEQIAFSPR--THT 784 Query: 1328 GVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQ 1387 +++Y + + GD++ T++D+ +TV V G+ +TL D + Sbjct: 785 KLSVYQAVSAELAPGDKVMVTRNDKTLDVANGDRFTVKTVEGEKLTLEDKKGRTV--ELD 842 Query: 1388 EQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYT 1447 ++ ++ AYA T H +QG + + T+ L + YV +SR + V+++T Sbjct: 843 KKQASYLSYAYATTVHKSQGLTCDRVLFNIDTKS---LTTSKDVFYVGISRARHEVEIFT 899 Query: 1448 DNRQGWTDAINNAVQKGTAHDV 1469 D+++ +++ K TA ++ Sbjct: 900 DDKKSLASSVSRDSPKTTAAEI 921 >UniRef50_D2QCL6 Conjugative relaxase domain protein n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QCL6_9SPHI Length = 919 Score = 427 bits (1097), Expect = e-117, Method: Composition-based stats. Identities = 185/939 (19%), Positives = 361/939 (38%), Gaps = 91/939 (9%) Query: 4 IAQVRSAGSAGNYYTD---KDNYYVLG-SMGERWAGRGAEQLGLQGSVDKDVFTRLLEGR 59 + Q SA A +Y++ K +YY+ + G+ AE+LGL G V+KDVF L + Sbjct: 1 MIQSHSASGAKSYFSQALAKADYYLNDQELQGVMHGKLAERLGLTGPVNKDVFFDLCDNV 60 Query: 60 LPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEA 119 P + +R GYD+ F PK +S++ L D +++A ++V ++ +E Sbjct: 61 NPATGKSMTPRTNEHRT-VGYDINFHCPKELSILHALSNDLHILEAFQKSVSETMQDIER 119 Query: 120 LASTRVMTDGQSETVLTGNLVMALFNHDTSRD-----QEPQLHTHAVVANVTQHNGEWKT 174 A TRV D TG L+ + F H T+R +P LH H V N T W Sbjct: 120 DAKTRVRKDKSVAERDTGELLYSTFIHQTARPVAGHLPDPHLHAHCFVFNAT-----WDA 174 Query: 175 LSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP---V 231 ++ K ++ + + + ++L + + GY+ K + + GVP V Sbjct: 175 --EEQQIKAVQFRDINRDMPYYQARFHKRLSDNLIEQGYQIRRTDK--AFSVDGVPQRVV 230 Query: 232 EAFSGRSQTIREAVGEDASLKSRDVAAL--DTRKSKQH-VDPEIKMAEWMQTLKETGFDI 288 + FS R+ I E ++ AL TR KQ AEW + ++E G D Sbjct: 231 DLFSKRTNEIGRIAKEKGITDIDELGALGARTRSKKQVGHTMAELKAEWRKQIQEFGPD- 289 Query: 289 RAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILP 348 D D + +R + + + V A+ ER +LA Sbjct: 290 ----DEGDGKRIVRFA--PVRNPSDLTLDRCVDHALDHGFERASVVQDRRLLASA---YR 340 Query: 349 PENGVIERARAGI-DEAISREQLIPL-DREKGLFTSGIHVLDELSVRALSRDIMKQNRVT 406 G I D+ + E+LI + + ++ L T+ + +E + +L+R + + Sbjct: 341 HSVGTSSLTLDAITDKFTNDERLIHVKEHDRVLCTTKQVLAEEARMVSLARAGQGKLKPL 400 Query: 407 VHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQII 466 + +DAV + ++I+ G G +G+ + E + ++ G+ V ++ Sbjct: 401 YQKAPDLTLDGQQADAVKHVLTTTHRVSIIRGAAG-SGKTTLMREALDHMKQAGKTVTVV 459 Query: 467 AADRRSQMNMKQDERLS-GELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGA 525 A + + +DE + E + + VD+ L ++ LL A Sbjct: 460 APTSEASRGVLRDEGFAEAETVAKLLSDKSMQDQLDNQILWVDEAGLLGTQDMTALLALA 519 Query: 526 ARHNVQVLITDSGQRTGT---GSALMAMKD-AGVNT------YRWQGGEQRPAT------ 569 N ++++ ++ + G AL + G+ T YR + + R A Sbjct: 520 QEKNARLILGGDTKQHASVVRGDALRILNTVGGIQTAEVSKIYRQRNADYRTAVEYLANG 579 Query: 570 -------------IISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRS 616 I D + L D+ A++K G+ ++ + +T+ IR Sbjct: 580 AIKQGFEKLDSINAIQTSDPLKPHDTLVKDYMATIKKGKSALVVSPTHQNSDAVTEVIRE 639 Query: 617 ELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWN--PETRSHDRYVIDRV 674 ++K G+LG + + L+ + L + + G +++ P + R++I+ Sbjct: 640 KMKATGMLGKKDYLLPRLTSLNLTEAEKADWRNLKTGQLIQFNQNLPGIKRGSRWIIE-- 697 Query: 675 TAQSHSLTLRDAQGETQVVRISSLDS-SWSLFRPEKMPVADGERLRVTGKIPGL---RVS 730 + + +++ E Q++ + +L S + ++ + +A G+ +R+T R++ Sbjct: 698 NSSDKGVFIQNE--EKQILPLPTLKSRDFDVYNRSDINLAKGDTIRITRNGFDQEKNRLN 755 Query: 731 GGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSA-TVF 789 G L V S+S++ V ++ S L + + T + + VF Sbjct: 756 NGQLLDVLSISKNGELHVRNRTSKADYKLDS----QYGHLTHAYCITSHAAQGKTVDEVF 811 Query: 790 ASVTQMAM----DNATLNGLARSGRDVRLYSSLDETRT--AEKLARHPSFTVVSEQIKTR 843 + ++R R+Y+ E A +L PS + + ++ Sbjct: 812 ITQPASTFPATDAKQFYVSVSRGRDRARIYTDDKEQLLDHAARLGDRPSASELVKRKNQT 871 Query: 844 A--GETSLETAISHQKSALHTPAQQAIHLALPVVESKKL 880 + + +S P + PV +KK Sbjct: 872 VDMAQQRIRDDLSRTTDRASRPKESTKPFKAPVPSTKKA 910 Score = 342 bits (878), Expect = 6e-92, Method: Composition-based stats. Identities = 126/630 (20%), Positives = 243/630 (38%), Gaps = 74/630 (11%) Query: 868 IHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYG 927 + AL + LL A + + T I + + L K + Sbjct: 315 VDHALDHGFERASVVQDRRLLASAYRHSVGTSSLT--LDAITDKFTNDERLI--HVKEHD 370 Query: 928 TGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRF 987 L ++ E ++ G+ + PL ++ P L Q A + +L T+ R Sbjct: 371 RVLCTTKQVLAEEARMVSLARAGQGKLKPLYQKAPDL---TLDGQQADAVKHVLTTTHRV 427 Query: 988 TVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAV-GEMRSAGV-DAQTLAS 1045 ++++G AG GKTT R + + V + PT A G +R G +A+T+A Sbjct: 428 SIIRGAAGSGKTTLMREALDHMKQA----GKTVTVVAPTSEASRGVLRDEGFAEAETVAK 483 Query: 1046 FLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQA 1105 L D +Q + N + +DE+ ++G DM AL R + GDT Q + Sbjct: 484 LLSDKSMQDQ------LDNQILWVDEAGLLGTQDMTALLALAQEKNARLILGGDTKQHAS 537 Query: 1106 IAPGQPFRLQQTRSAADVAIMKEIVRQ-TPELREAVYSLINRDVERALSGLESVKPSQVP 1164 + G R+ T A + +I RQ + R AV L N +++ L+S+ Q Sbjct: 538 VVRGDALRILNTVGGIQTAEVSKIYRQRNADYRTAVEYLANGAIKQGFEKLDSINAIQTS 597 Query: 1165 RQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAR 1224 P+ ++ +V+DY T + Sbjct: 598 D---------------------------------------PLKPHDTLVKDYMA-TIKKG 617 Query: 1225 EQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHR 1284 + L+V+ +++ + +I + + G LGK+ ++P L + N+ + E +T + Sbjct: 618 KSALVVSPTHQNSDAVTEVIREKMKATGMLGKKDYLLPRLTSLNLTEAEKADWRNLKTGQ 677 Query: 1285 DALVLVDNVYHRIAGI-----SKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRV 1339 + N+ G + D + +Q+ E +++ + +Y I + Sbjct: 678 -LIQFNQNLPGIKRGSRWIIENSSDKGVFIQNEE--KQILPLPTLKSRDFDVYNRSDINL 734 Query: 1340 GTGDRMRFTKS--DRERGYVAN-SVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDL 1396 GD +R T++ D+E+ + N + V ++S + L +T + + H+ Sbjct: 735 AKGDTIRITRNGFDQEKNRLNNGQLLDVLSISKNG-ELHVRNRTSKADYKLDSQYGHLTH 793 Query: 1397 AYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDA 1456 AY IT+H AQG + + + YV++SR + ++YTD+++ D Sbjct: 794 AYCITSHAAQGKTVDEVFITQPASTFP--ATDAKQFYVSVSRGRDRARIYTDDKEQLLDH 851 Query: 1457 INNAVQKGTAHDVFEPKPDREVMNAERLFS 1486 + +A ++ + K M +R+ Sbjct: 852 AARLGDRPSASELVKRKNQTVDMAQQRIRD 881 >UniRef50_UPI00016ACDBF TrwC protein n=1 Tax=Burkholderia thailandensis MSMB43 RepID=UPI00016ACDBF Length = 941 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 201/950 (21%), Positives = 352/950 (37%), Gaps = 133/950 (14%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGER--WAGRGAEQLGLQGSVDKDVFTRLLEG 58 M+S+ V +A A Y+ KDNYY E W G+GA LGL G V F LLEG Sbjct: 1 MLSLHNVSNAAQAQTYFA-KDNYYTQDENAEHSAWFGKGAATLGLSGKVTPAQFMNLLEG 59 Query: 59 RLPDGADLSRMQDGSN-----RHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFA 113 R+ + + D H+PG DLTFSAPKSVS++A + GDK + AH +A + A Sbjct: 60 RVGEQQLGKWVTDEKTCERRQEHQPGIDLTFSAPKSVSLLAEVAGDKDVRAAHERAAEVA 119 Query: 114 VRQVEA-LASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH-NGE 171 + +E + TR +G + TGN+++A+F H+TSRD +PQ HTHAV+ N TQ +G+ Sbjct: 120 LTYIEEQVIRTRATKNGVTSLEYTGNMIVAMFRHNTSRDLDPQTHTHAVLINATQREDGQ 179 Query: 172 WKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP- 230 W+++ + +Y Q G +Y +L ++ +GY K+G +E+ GV Sbjct: 180 WRSIDN---------REIYQIQKLAGAIYNAELAGGLQQIGYRLTNPDKNGNFEIQGVSR 230 Query: 231 --VEAFSGRSQTIREAVGED------ASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLK 282 +E FS R ++E + + AS ++ AAL TR K+ VD + + +W + Sbjct: 231 EQIEHFSQRRAAMKEVLEKQNTTLDAASAAEKERAALATRDRKKDVDHQELLDDWNARAE 290 Query: 283 ETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLAR 342 E D+ R A +R G + A++ A A L ER+V D++ Sbjct: 291 EHDIDLDGLRAATAKRK-----EDGIGIPQRLTGRDAMSFAAAQLIEREVAVDKIDLVKT 345 Query: 343 TVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDI--- 399 + G E + D+ + LI L +K +T+ E R Sbjct: 346 AIEHGTGRVGARE-VLSAFDDLEKKGDLIALPDDK--YTTRKMFQSERWAIDFVRQQKDR 402 Query: 400 ---------MKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVA 450 + Q E+ P G DA+ + V G G G+ + Sbjct: 403 APIVLDAATVTQRIAASEKEQPFPYATGQKDAIVLALTSPDRFVAVQGLAG-TGKTTMLR 461 Query: 451 ELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGR----RQLLEGMAFTPG---- 502 L +A +G V+ +A + M ++ ++ + + RQL + + F Sbjct: 462 TLNDIAVSEGYVVRGMAPTGAASKIMVKETGIAADTVAMFQIKERQLQKDIEFAKQFAPD 521 Query: 503 -----STVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSG---QRTGTGSALMAMKDAG 554 +VD+ L+ ++ + + A + N +V+ Q G + G Sbjct: 522 FVRRPELWVVDESSFLAQRQLAQIHNLAEKANAKVVYLGDKLQLQGVEAGKPFELAQGHG 581 Query: 555 VNTYRWQGGE-------QRPATII----------SEPDRNVRYARLAGDFAA-------- 589 + T Q+ II D ++ + D+ A Sbjct: 582 IATAHMTEINRQKTPHMQKAVDIITGRNLLKAGERLTDIELKRNLQSFDYLARQGKVTET 641 Query: 590 --------------SVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALS 635 S + S+ +++ L IR+E+ + L E + L Sbjct: 642 EDVLGDAKSRYFAMSPEERAASIVITPLNKDRVSLNDDIRAEMWARRELKGRESALEILV 701 Query: 636 PVWLDSRSRYLRDMYRPGMVMEQWNPETR----SHDRYVIDRVTAQSHSLTLRDAQGETQ 691 Y PG V+ + D + V + +T+ G Sbjct: 702 SKGWTRAMIKEAQYYTPGDVVRFNRDYQQIDASKGDYARVLGVDHELGVVTIEKRDGTRL 761 Query: 692 VVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPG 751 + + ++ E+ +A G+ +R+T G+ +V + + V Sbjct: 762 DWEPAKHN-KVEVYDREQRQLAVGDVIRLTRNDDT--FKNGETAKVIGLQGGLAVLEVSD 818 Query: 752 RAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFA-------------------SV 792 +A + V+ + S + +F Sbjct: 819 KAATSHHHVNLNTSQHWDHAYTSTIHAAQGASKAQVIFVINMPDIDPEKPKQAEQMLAGF 878 Query: 793 TQMAMDNATLNGLARSGRDVRLYSS---LDETRTAEKLARHPSFTVVSEQ 839 ++ D + G+ R+ RD+ + ++ L ++ + S E Sbjct: 879 AKVFGDRSYYVGVTRASRDIAIVTNDVGLTRQAITQQQDKTTSIGAQGEH 928 Score = 366 bits (938), Expect = 7e-99, Method: Composition-based stats. Identities = 158/718 (22%), Positives = 278/718 (38%), Gaps = 89/718 (12%) Query: 795 MAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIK-----TRAGETSL 849 + N TL+ + + ++ ++ D + + + +E+ RA Sbjct: 247 LEKQNTTLDAASAAEKERAALATRDRKKDVDHQELLDDWNARAEEHDIDLDGLRAATAKR 306 Query: 850 ETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEIN 909 + L + A+ A + +++A +DL+ A G E+ + Sbjct: 307 KEDGIGIPQRLTG--RDAMSFAAAQLIEREVAVDKIDLVKTAIEHGTGRVGAREVLSAFD 364 Query: 910 AQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKE---------AVMPLMER 960 K+GDL+ + K +R +++E+ + + + K+ V + Sbjct: 365 DLEKKGDLIALPDDK------YTTRKMFQSERWAIDFVRQQKDRAPIVLDAATVTQRIAA 418 Query: 961 VPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRV 1020 E +GQ+ A + L + DRF VQG AG GKTT R + N + SE V Sbjct: 419 SEKEQPFPYATGQKDAIVLALTSPDRFVAVQGLAGTGKTTMLRTL----NDIAVSEGYVV 474 Query: 1021 VGLGPTHRAVGEM-RSAGVDAQTLASFLHDTQLQQRSGE-----TPDFSN--TLFLLDES 1072 G+ PT A M + G+ A T+A F + Q+ E PDF L+++DES Sbjct: 475 RGMAPTGAASKIMVKETGIAADTVAMFQIKERQLQKDIEFAKQFAPDFVRRPELWVVDES 534 Query: 1073 SMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQ 1132 S + +A+ + L + V GD QLQ + G+PF L Q A A M EI RQ Sbjct: 535 SFLAQRQLAQIHNLAEKANAKVVYLGDKLQLQGVEAGKPFELAQGHGIA-TAHMTEINRQ 593 Query: 1133 T-PELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQ 1191 P +++AV + R++ +A L ++ + + A + VTE E L +A+ Sbjct: 594 KTPHMQKAVDIITGRNLLKAGERLTDIELKRNLQSFDYLARQGKVTET----EDVLGDAK 649 Query: 1192 QKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKA 1251 + Y +PE R ++++T LN+DR LN I Sbjct: 650 SR----------------------YFAMSPEERAASIVITPLNKDRVSLNDDIRAEMWAR 687 Query: 1252 GELGKEQVMVPVLNTANIRDGELRRLSTWETHR--------DALVLVDNVYHRIAGISKD 1303 EL + + +L + ++ + + Y R+ G+ + Sbjct: 688 RELKGRESALEILVSKGWTRAMIKEAQYYTPGDVVRFNRDYQQIDASKGDYARVLGVDHE 747 Query: 1304 DGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWT 1363 G++T++ +G P A V +Y + ++ GD +R T++D + Sbjct: 748 LGVVTIEKRDGTRLDWEP--AKHNKVEVYDREQRQLAVGDVIRLTRNDDT--FKNGETAK 803 Query: 1364 VTAVSGDSVTLSDGQQTREIRPG-QEQAEQHIDLAYAITAHGAQGASETFAIALEGT--- 1419 V + G L + QH D AY T H AQGAS+ I + Sbjct: 804 VIGLQGGLAVLEVSDKAATSHHHVNLNTSQHWDHAYTSTIHAAQGASKAQVIFVINMPDI 863 Query: 1420 -----EGNRKLMAGF------ESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTA 1466 + +++AGF S YV ++R + + + T++ AI K T+ Sbjct: 864 DPEKPKQAEQMLAGFAKVFGDRSYYVGVTRASRDIAIVTNDVGLTRQAITQQQDKTTS 921 >UniRef50_C9CRW2 TraI n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9CRW2_9RHOB Length = 822 Score = 422 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 185/852 (21%), Positives = 322/852 (37%), Gaps = 125/852 (14%) Query: 503 STVIVDQGEKLSLKETLTLLDGAARHNVQ--VLITDSGQ--RTGTGSALMAMKDAGVNTY 558 S ++VD+ LS K+ + +D A R VL+ D+ Q G M++AG+ T Sbjct: 33 SILLVDEASMLSAKDMRSFMDYAERTKAARVVLVGDTKQLDAVSAGQPFAQMQEAGMRTA 92 Query: 559 RWQGGEQRPATII---------------------SEPDRNVRYARLAGDFAASVKAGEES 597 +++ + S + A + A Sbjct: 93 VMDEIQRQRDRNLKAAVYDAVRGDIAGAFDKLQDSIEKADNPRQAAADKYLALSPEDRSE 152 Query: 598 VAQVS-GVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVM 656 ++ +A + A+R LK +G L V + L P + S + Y PG V+ Sbjct: 153 TRILTLNNTSRAEINSAVREGLKAEGTLLRDGVVIEGLVPRPMTSVEKSDSHNYAPGEVV 212 Query: 657 EQWNPET----RSHDRYVIDRVTAQSHSLTL-RDAQGETQVVRISS------LDSSWSLF 705 + + + Y I+RV +++L++ R+ GE + +++ L +S + Sbjct: 213 QPIVDNREAGLQRNTLYRIERVDHATNTLSVERETDGERISIPLAAQAGHQPLGASLVAY 272 Query: 706 RPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPF 765 + E ++ GE +RV ++ G R V S +T+ + ++ + Sbjct: 273 QNEAREISTGEAVRVRITDKDQGLTNGTRATVTSTENGVITLS---TRDGRSVEIEPQSL 329 Query: 766 TALKLENGWVETP----GHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDET 821 A LE+ + T G +V S +MA ++R+ RD + + + Sbjct: 330 GARGLEHDYAATAHSVQGETVDRVIVSMNSGDRMATQKGFYVEISRA-RDEAVLITDNRV 388 Query: 822 RTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLA 881 A K+A + V + L + A +A+ A+ + ++ A Sbjct: 389 ALARKIAENTGVQVNA-----------LSNKLDGFFQKPEVDAVRAVSRAVEHISERESA 437 Query: 882 FSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEK 941 + DL T A +F+ G+ F ++ EINA+I+ G L G +L +AS E E+ Sbjct: 438 YLRTDLATAALTFSI-GSSFEDVDKEINARIEDGRLF----VSGKDNRVLTDKASVELER 492 Query: 942 SILRHILEGKEAVMPLMERVPGELME-----------KLTSGQRAATRMILETSDRFTVV 990 SI+ E +++ + G E LT GQR++ L + R+ V Sbjct: 493 SIIATWKESEQSEGLSIPSEQGRNGESLLIRRLSVVRTLTDGQRSSIETALTGTGRYVGV 552 Query: 991 QGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVDAQTLASFLHDT 1050 QG+AG GKT + V G+ P+H+AV E+ S A+TLA +T Sbjct: 553 QGFAGTGKTHML----ERLAHYAHGAGYEVKGMAPSHQAVHELASVLGSAETLAK---NT 605 Query: 1051 QLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGG-RAVASGDTDQLQAIAPG 1109 ++ E D S T+ ++DE+SM +M R V GDT QL A+A G Sbjct: 606 TAERHHPEDVDNSKTILVVDEASMASAKEMRDLMGYAERTRSPRVVFVGDTQQLDAVAAG 665 Query: 1110 QPFRLQQTRSAADVAIMKEIVRQTP-ELREAVYSLINRDVERALSGLESVKPSQVPRQEG 1168 QPF Q ++ A+M +I RQ +L+EAVY I +++ AL L+ Sbjct: 666 QPFAQLQ-KAGMRTAVMDDIRRQRDVDLKEAVYHSIRGEIQPALDRLDGNVLEV------ 718 Query: 1169 AWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTL 1228 Y PE R+ T Sbjct: 719 -------------------------------------DDPRAEAADRYLSLPPEVRDTTR 741 Query: 1229 IVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALV 1288 I+T N R +N + + K G L E+V V L+ + + +L ++ + Sbjct: 742 ILTLTNVARSEINEAVREGMWKEGTLTGEEVTVQGLSNQQLTESQLADARSYAVGTRVMP 801 Query: 1289 LVDNVYHRIAGI 1300 + + + Sbjct: 802 VATSEKFSLVKT 813 Score = 246 bits (627), Expect = 7e-63, Method: Composition-based stats. Identities = 104/472 (22%), Positives = 169/472 (35%), Gaps = 71/472 (15%) Query: 1031 GEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAG 1090 E+ A T+AS + + + D S ++ L+DE+SM+ DM Sbjct: 2 NELNKVVDSAATVASIVSSERYY---PQKVDNSRSILLVDEASMLSAKDMRSFMDYAERT 58 Query: 1091 GG-RAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTP-ELREAVYSLINRDV 1148 R V GDT QL A++ GQPF Q + A+M EI RQ L+ AVY + D+ Sbjct: 59 KAARVVLVGDTKQLDAVSAGQPFAQMQE-AGMRTAVMDEIQRQRDRNLKAAVYDAVRGDI 117 Query: 1149 ERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTL 1208 A L+ + Sbjct: 118 AGAFDKLQ-------------------------------------------DSIEKADNP 134 Query: 1209 YEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTAN 1268 +A Y +PE R +T I+T N R +NS + + + G L ++ V++ L Sbjct: 135 RQAAADKYLALSPEDRSETRILTLNNTSRAEINSAVREGLKAEGTLLRDGVVIEGLVPRP 194 Query: 1269 IRDGELRRLSTWETHRDA--------LVLVDNVYHRIAGISKDDGLITLQDAEGNTRLIS 1320 + E + L N +RI + ++++ R+ Sbjct: 195 MTSVEKSDSHNYAPGEVVQPIVDNREAGLQRNTLYRIERVDHATNTLSVERETDGERISI 254 Query: 1321 PREAVAEG------VTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTL 1374 P A A + Y + + TG+ +R +D+++G + TVT+ +TL Sbjct: 255 PLAAQAGHQPLGASLVAYQNEAREISTGEAVRVRITDKDQGLTNGTRATVTSTENGVITL 314 Query: 1375 SDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYV 1434 S Q + ++ YA TAH QG + I + G+R MA + YV Sbjct: 315 STRDGRSVEIEPQSLGARGLEHDYAATAHSVQGETVDRVIVSMNS-GDR--MATQKGFYV 371 Query: 1435 ALSRMKQHVQVYTDNRQGWTDAINNA-----VQKGTAHDVFEPKPDREVMNA 1481 +SR + + TDNR I D F KP+ + + A Sbjct: 372 EISRARDEAVLITDNRVALARKIAENTGVQVNALSNKLDGFFQKPEVDAVRA 423 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 73/458 (15%), Positives = 146/458 (31%), Gaps = 68/458 (14%) Query: 251 LKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPAS 310 ++RD A L T + ++A + + TG + A + D G Sbjct: 374 SRARDEAVLIT---------DNRVALARKIAENTGVQVNALSNKLD----------GFFQ 414 Query: 311 QDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQL 370 + D +AV++A+ +SER+ + TD+ + + E I+ I +L Sbjct: 415 KPEVDAVRAVSRAVEHISERESAYLRTDLATAALTFSIGSSF--EDVDKEINARIEDGRL 472 Query: 371 IPLDREKGLFTSGIHVLDELSVRA--------------LSRDIMKQNRVTVHPEKSVPRT 416 ++ + T V E S+ A + ++ + T Sbjct: 473 FVSGKDNRVLTDKASVELERSIIATWKESEQSEGLSIPSEQGRNGESLLIRRLSVVRTLT 532 Query: 417 AGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRS---- 472 G ++ V G G G+ + L A G EV+ +A ++ Sbjct: 533 DGQRSSIETALTGTGRYVGVQGFAG-TGKTHMLERLAHYAHGAGYEVKGMAPSHQAVHEL 591 Query: 473 QMNMKQDERLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNV-Q 531 + E L+ R + + ++VD+ S KE L+ A R + Sbjct: 592 ASVLGSAETLAKNTTAERHHPEDVDNSK--TILVVDEASMASAKEMRDLMGYAERTRSPR 649 Query: 532 VLITDSGQR---TGTGSALMAMKDAGVNTYRWQGGEQRPATIISEP-------------- 574 V+ Q+ G ++ AG+ T ++ + E Sbjct: 650 VVFVGDTQQLDAVAAGQPFAQLQKAGMRTAVMDDIRRQRDVDLKEAVYHSIRGEIQPALD 709 Query: 575 -------DRNVRYARLAGDFAASVKAGEESVAQVSGVR-EQAILTQAIRSELKTQGVLGL 626 + + A A + + ++ ++ ++ + +A+R + +G L Sbjct: 710 RLDGNVLEVDDPRAEAADRYLSLPPEVRDTTRILTLTNVARSEINEAVREGMWKEGTLTG 769 Query: 627 PEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETR 664 EVT+ LS L Y G + + Sbjct: 770 EEVTVQGLSNQQLTESQLADARSYAVGTRVMPVATSEK 807 >UniRef50_A8ZL36 Putative uncharacterized protein n=2 Tax=Acaryochloris marina MBIC11017 RepID=A8ZL36_ACAM1 Length = 1861 Score = 420 bits (1080), Expect = e-115, Method: Composition-based stats. Identities = 198/893 (22%), Positives = 336/893 (37%), Gaps = 102/893 (11%) Query: 33 WAGRGAEQLGLQGSVDKDVFTRLLEGRLPD------GADLSRMQ----DGSNRHRPGYDL 82 W G A L V ++ F L G LP+ G + R++ + ++ R +D+ Sbjct: 6 WVGSNAIVQKLGTYVKREDFKALSRGFLPEALKSVAGGAVQRIRGKKPNEEDKERHAHDV 65 Query: 83 TFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVE-ALASTRVMTDGQSETVLTGNLVM 141 SAPKSVSM L GD R+ DAH +AV +E A TR+ +G V TGN++ Sbjct: 66 VLSAPKSVSMALHLEGDNRIFDAHMEAVLETFELLEREYAQTRIQVNGVRSVVDTGNMIA 125 Query: 142 ALFNHDTSRDQEPQLHTHAVVANVTQ-HNGEWKTLSSDKVGKTGFIENVYANQIAFGRLY 200 AL H TSRD + QLHTH ++ N TQ +G W++LS +K+ A G Y Sbjct: 126 ALMPHHTSRDGDMQLHTHMLIMNGTQGPDGRWRSLSHEKL----------AQAKWIGSFY 175 Query: 201 REKLKEQVEALGYETEVVGKHGMWEMPGV---PVEAFSGRSQTIREAV---GEDASLKSR 254 R+KL E+V+ LGY +E+ G VE FS R + I +AV G + + +++ Sbjct: 176 RQKLAEKVQRLGYRIYQT--KDAFELVGYDRSDVEVFSKRHRAIVKAVRDEGLEVTPENK 233 Query: 255 DVAALDTRKSKQHVD--PEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQD 312 + L TRK+K+ V EI W + + G P D Sbjct: 234 KLKVLPTRKAKRGVGKKLEIIQDHWREEARSQGVGHPVL------------AEPLAVLPD 281 Query: 313 GPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAIS-REQLI 371 + V AI +E F D+ A L + +E+ +DEAI ++LI Sbjct: 282 PGRARYEVESAIRHYAEWSSIFEKDDIYAYVFKTLKRQGMAMEQ----VDEAIKQSKELI 337 Query: 372 PLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTV-HPEK---SVPRTAGYSDAVSVLA 427 P+DR FT+ V +E + Q + V HP SV + + Sbjct: 338 PVDRG---FTTVTAVEEEAQIHQRWMAGQGQAQPMVAHPSLAGISVKLNEDQAKTILNTL 394 Query: 428 QDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELI 487 I G G G+ + L + G ++ + + ++ + + Sbjct: 395 TSTDHYQIWQGFPG-VGKSRTLGVLKTLLNGSGFTIRGFSPTIPAAKKLQDELGI--TTN 451 Query: 488 TGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTG---TG 544 T +L + +P ++D+ +S ++ +L+ A QV+ + G Sbjct: 452 TVEHLVLHQVDDSPNQVWLIDEAGMMSRRQMKVILEKAEAVKAQVIFVGDAGQNSSIEAG 511 Query: 545 SALMAMKDAGVNTY------RWQGGEQRPAT--------------------IISEPDRNV 578 + M+ G T+ R + Q+ A +I + Sbjct: 512 NPFKFMQANGATTHRIEEIIRQKVDVQKQAVELIARGRGIAALELLDANGYVIESGCKAE 571 Query: 579 RYARLAGDFAASVKAGEESVAQVSGVREQAILT-QAIRSELKTQGVLGLPEVTMTALSPV 637 A + A +E ++G E+ + T QAIR K G LG + L Sbjct: 572 MAQAAADQYLALPLKEQEETLIIAGTNEERLDTEQAIRRGEKQAGRLGESSK-IVQLKSR 630 Query: 638 WLDSRSRYLRDMYRPGMVME----QWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVV 693 L + D YR G + + + Y +++ + L + G Sbjct: 631 NLSIEQKRRVDWYRKGDYVRLLQTSHTASIKRGELYKVEK--REGDELVVSSFGGRLYRF 688 Query: 694 RISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRA 753 + + ++ K VA G++LR T I G +L V ++ M V Sbjct: 689 KPAKYKLK-EVYSAHKFDVAVGDKLRWTTTIKENNWINGQQLTVTALDGLNMKV-RDHEG 746 Query: 754 EPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNA-TLNGLARSGRDV 812 +P++ AL+ + W S S T+ + L ++R ++ Sbjct: 747 RSHDVPLTQPL--ALEYDRVWTSYRSQSGSKKRTIVITTNDRTSSREPFLVDISRQEHEL 804 Query: 813 RLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQ 865 +Y+ + ++A+ + + I+ G TA + S+ +P Sbjct: 805 TVYT-ESLNKLRNRVAKSNAQKSALDLIEGTYGNQRTTTADHQRASSPVSPTH 856 Score = 335 bits (858), Expect = 1e-89, Method: Composition-based stats. Identities = 143/830 (17%), Positives = 286/830 (34%), Gaps = 104/830 (12%) Query: 868 IHLALPVVESKKLAFSMVDLLTEAKS-FAAEGTGFTELGGEINAQIKRGDLLYVDVAKGY 926 + A+ F D+ +G ++ I + +L+ VD Sbjct: 289 VESAIRHYAEWSSIFEKDDIYAYVFKTLKRQGMAMEQVDEAIK---QSKELIPVDRG--- 342 Query: 927 GTGLLVSRASYEAEKSILRHILEGKEAVMPLM-ERVPGELMEKLTSGQRAATRMILETSD 985 + + E E I + + G+ P++ + KL Q L ++D Sbjct: 343 ----FTTVTAVEEEAQIHQRWMAGQGQAQPMVAHPSLAGISVKLNEDQAKTILNTLTSTD 398 Query: 986 RFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA-GVDAQTLA 1044 + + QG+ GVGK+ + + +N + G PT A +++ G+ T+ Sbjct: 399 HYQIWQGFPGVGKSRTLGVLKTLLN----GSGFTIRGFSPTIPAAKKLQDELGITTNTVE 454 Query: 1045 SFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQ 1104 + + D N ++L+DE+ M+ M A + + GD Q Sbjct: 455 HLVLH--------QVDDSPNQVWLIDEAGMMSRRQMKVILEKAEAVKAQVIFVGDAGQNS 506 Query: 1105 AIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVP 1164 +I G PF+ Q + A ++EI+RQ ++++ LI R R ++ LE + + Sbjct: 507 SIEAGNPFKFMQA-NGATTHRIEEIIRQKVDVQKQAVELIAR--GRGIAALELLDANGYV 563 Query: 1165 RQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAR 1224 + G + +A Y + + Sbjct: 564 IESGC-----------------------------------KAEMAQAAADQYLALPLKEQ 588 Query: 1225 EQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHR 1284 E+TLI+ NE+R I ++AG LG+ +V L + N+ + RR+ + Sbjct: 589 EETLIIAGTNEERLDTEQAIRRGEKQAGRLGESSKIV-QLKSRNLSIEQKRRVDWYRKGD 647 Query: 1285 DALVL--------VDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDT 1336 +L +++ ++ + + G RL + A + +Y+ Sbjct: 648 YVRLLQTSHTASIKRGELYKVE--KREGDELVVSSFGG--RLYRFKPAKYKLKEVYSAHK 703 Query: 1337 IRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDL 1396 V GD++R+T + +E ++ TVTA+ G ++ + D + P + ++ Sbjct: 704 FDVAVGDKLRWTTTIKENNWINGQQLTVTALDGLNMKVRDHEGRSHDVPLTQPLA--LEY 761 Query: 1397 AYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDA 1456 T++ +Q S+ I + + E V +SR + + VYT++ + Sbjct: 762 DRVWTSYRSQSGSKKRTIVI----TTNDRTSSREPFLVDISRQEHELTVYTESLNKLRNR 817 Query: 1457 INNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPARFI 1516 + + + +A D+ E + + + L Q+ G Sbjct: 818 VAKSNAQKSALDLIEGTYGNQRTTTADHQRASSPVSPTHGRDHHLDQSSRRGPSPEPTHP 877 Query: 1517 APGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGEGRVKGSGDAQFVALQG 1576 ++ P NG + P+ G++G G G QG Sbjct: 878 RREQRTQVPSQGADQHHSNGSQS--RSQPVH----PGIQGGDGIQETLGYER----VDQG 927 Query: 1577 SRNGESLLADNMQDGVRIARDNPDSGVVVRIA-----GEGRPWNPGAITGGRVWGDIPDN 1631 +R G L + R+A D+ G+ R G+ P WG + Sbjct: 928 TRQGNGQLKVENRGYQRLAVDDERQGIGGRRGDHADQGQAPPTRTTQDGRSTEWGATSSD 987 Query: 1632 SVQ-------PGAGNGEPVTAEVLAQRQAEEAIRRETERRADEIVRKMAE 1674 + +LA + E++ + E + E + ++AE Sbjct: 988 IANWVMHWSEENELAASGLEDHLLALDKDIESLTQSLEPYSFEGLEELAE 1037 >UniRef50_Q3SHW0 TrwC protein n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SHW0_THIDA Length = 929 Score = 420 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 212/907 (23%), Positives = 374/907 (41%), Gaps = 128/907 (14%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYV-LGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGR 59 + +++ +++AG A YY D+YY G W G+GAE LGL+G V +L G Sbjct: 2 VCTVSAIKTAGVAAEYYAQTDDYYRDRGHAPTAWQGKGAEALGLRGEVTPAQAEAILNGI 61 Query: 60 LPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVE- 118 LP+G + G HRPG+D TFSAPKSVS+ A + GD RLI AH++AV+ A++ +E Sbjct: 62 LPNGERV-----GGGDHRPGWDATFSAPKSVSVAAYVRGDDRLIAAHDRAVNAAIQYLER 116 Query: 119 ALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ-HNGEWKTLSS 177 +A+TR+ +G+ T TGNLV A + HD SR+ EP LHTH+V+AN+TQ +G+W++L S Sbjct: 117 EVAATRIREEGEVRTEATGNLVAATYRHDVSREGEPDLHTHSVIANITQSADGQWRSLES 176 Query: 178 DKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVV--GKHGMWEMPGVPV---E 232 +Y Q G +YR L + E LGY TE G+H +E+ V + Sbjct: 177 RP---------LYRLQTDAGAVYRAALARECERLGYATERTRAGEHPSFELRQVSQAERD 227 Query: 233 AFSGRSQTIREAVG------EDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGF 286 +S RS+ + + E A+ + + AAL TR++K ++ + ++ W + ++ G Sbjct: 228 MWSTRSRQVEAELAKMGLSRETATAEQKQAAALATRQAKGNIGRDNLLSNWREQSRQAGH 287 Query: 287 DIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGI 346 ++ A A + A + + AV QA+ LSER+ ++T ++ + Sbjct: 288 EMPALPQAQEIDAG----------EYRRRAEAAVRQAVEHLSERESRYTERQIVTEARKL 337 Query: 347 LPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDI---MKQN 403 GID+ R + L R L + D ++ + L + + Sbjct: 338 ----------GMGGIDDQDIRAAVADLHRRGELVETQTRQHDAITGQRLEQAGYTTREAQ 387 Query: 404 RVTVHPEKSVPRTAG-----------------------------YSDAVSVLAQDRPSLA 434 R+ H + R AG +A L + Sbjct: 388 RIERHMLDTASRAAGAIKPAMSIEAADAAISAQVAKTGHAFNTAQVEATKALLTGTDRIT 447 Query: 435 IVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLL 494 +V G G A +A ++QG V +A S + + + Sbjct: 448 LVQGYAGTAKTTSVLAVSSAALQQQGYGVIALAPTHSSAKTLGDAIGAESQTVAKFLNSR 507 Query: 495 EGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTG---TGSALMAMK 551 ++ P +VD+ LS ++ LL +V++ ++ G G+A ++ Sbjct: 508 PEVSSQP-RIYMVDEASMLSARDMDKLLSRTQ--GGRVVMVGDVKQLGSVEAGAAFRQLQ 564 Query: 552 DAG------VNTYRWQGGEQRPATI----------------ISEPD-RNVRYARLAGDFA 588 G ++ Q ++ A + + E D R R +A D+A Sbjct: 565 TDGDLKTQVLDYIVRQRSDELRAAVYDAIRGDVQSALSKIDVRELDTRESRVGAIAADYA 624 Query: 589 ASVKAGEESVAQVSGVR-EQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLR 647 + + ++ R ++ + A+R +L +G LG VT+ AL + + Sbjct: 625 GMSRDDRDRTIIIAPGRDDRRQINDAVREQLAARGELGG-SVTIQALDSRDMTAVESRRA 683 Query: 648 DMYRPGMVME----QWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWS 703 Y G ++ + + D + V + +TL G + + S + + + Sbjct: 684 GSYAVGHQVQAGRDYASLGLKRGDFARVVAVDVDCNRITLETVTGHQKEIDPSRV-TKLA 742 Query: 704 LFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDS 763 F M VA G++L ++ + G L V ++E + V + L Sbjct: 743 AFEQRDMAVAVGDKL--VNRVNTQTLKNGTPLTVEKIAEGQIHV-RDAAGKLHRL----D 795 Query: 764 PFTALKLENGWVETPGHSVSDSATVF-----ASVTQMAMDNATLNGLARSGRDVRLYSSL 818 +L++G+ +T S + T ++ T + L+R+ D R+Y+ Sbjct: 796 AGAMHRLDHGYAQTGHESQGRTCTRVLIHAESARTNLQTQQNMYVALSRATDDARVYTDN 855 Query: 819 DETRTAE 825 A+ Sbjct: 856 RGALAAQ 862 Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats. Identities = 159/712 (22%), Positives = 268/712 (37%), Gaps = 96/712 (13%) Query: 782 VSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIK 841 + S V A + +M + T A + L + + + R + EQ + Sbjct: 230 STRSRQVEAELAKMGLSRET--ATAEQKQAAALAT----RQAKGNIGRDNLLSNWREQSR 283 Query: 842 TRAGE-TSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTG 900 E +L A A+ A+ A+ + ++ ++ ++TEA+ G Sbjct: 284 QAGHEMPALPQAQEIDAGEYRRRAEAAVRQAVEHLSERESRYTERQIVTEARKLGMGGID 343 Query: 901 FTELGGEINAQIKRGDLLYVDVAKGYG-------TGLLVSRASYEAEKSILRHILEGKEA 953 ++ + +RG+L+ + +R + E+ +L A Sbjct: 344 DQDIRAAVADLHRRGELVETQTRQHDAITGQRLEQAGYTTREAQRIERHMLDTASRAAGA 403 Query: 954 VMPLMERVPGELM---------EKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRA 1004 + P M + + Q AT+ +L +DR T+VQGYAG KTT A Sbjct: 404 IKPAMSIEAADAAISAQVAKTGHAFNTAQVEATKALLTGTDRITLVQGYAGTAKTTSVLA 463 Query: 1005 VMSAVNMLPESERPRVVGLGPTHRAVGEMRSA-GVDAQTLASFLHDTQLQQRSGETPDFS 1063 V SA + + V+ L PTH + + A G ++QT+A FL+ Sbjct: 464 VSSAA---LQQQGYGVIALAPTHSSAKTLGDAIGAESQTVAKFLNSRPEVSSQPR----- 515 Query: 1064 NTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADV 1123 ++++DE+SM+ DM + + GGR V GD QL ++ G FR QT Sbjct: 516 --IYMVDEASMLSARDMDKLLSRTQ--GGRVVMVGDVKQLGSVEAGAAFRQLQTDGDLKT 571 Query: 1124 AIMKEIVRQT-PELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHS 1182 ++ IVRQ ELR AVY I DV+ ALS ++ Sbjct: 572 QVLDYIVRQRSDELRAAVYDAIRGDVQSALSKID-------------------------- 605 Query: 1183 QEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNS 1242 D + AI DY G + + R++T+I+ +DRR +N Sbjct: 606 ----------------VRELDTRESRVGAIAADYAGMSRDDRDRTIIIAPGRDDRRQIND 649 Query: 1243 MIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDA--------LVLVDNVY 1294 + + GELG V + L++ ++ E RR ++ L L + Sbjct: 650 AVREQLAARGELGG-SVTIQALDSRDMTAVESRRAGSYAVGHQVQAGRDYASLGLKRGDF 708 Query: 1295 HRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRER 1354 R+ + D ITL+ G+ + I P + + + V GD++ + + Sbjct: 709 ARVVAVDVDCNRITLETVTGHQKEIDPSRVT--KLAAFEQRDMAVAVGDKLVNRVN--TQ 764 Query: 1355 GYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAI 1414 + TV ++ + + D + A +D YA T H +QG + T Sbjct: 765 TLKNGTPLTVEKIAEGQIHVRDAAGK--LHRLDAGAMHRLDHGYAQTGHESQGRTCTRV- 821 Query: 1415 ALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTA 1466 L E R + ++ YVALSR +VYTDNR I + Sbjct: 822 -LIHAESARTNLQTQQNMYVALSRATDDARVYTDNRGALAAQIERESGQKET 872 >UniRef50_B1X2J5 Putative TrwC/TraI protein n=1 Tax=Cyanothece sp. ATCC 51142 RepID=B1X2J5_CYAA5 Length = 1053 Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats. Identities = 190/891 (21%), Positives = 342/891 (38%), Gaps = 129/891 (14%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSM--------------------GERWAGRGAEQ 40 M++I ++S +K+ YY W G+GA + Sbjct: 1 MLTITTIKSGIR------EKEEYYTQDESLEQQPLQQQNQPLNRNNKLTQAVWYGQGASE 54 Query: 41 LGLQGSVDKDVFTRLLEGRLPDGADLSRMQDGS-NRHRPGYDLTFSAPKSVSMMAMLGGD 99 LGL G + ++ F + G P+ + R ++ R G DLTFSAPKSVS+ +G D Sbjct: 55 LGLSGPIQQEDFKSVFYGFQPNADETIRRKNNRFGTERLGDDLTFSAPKSVSIALHVGND 114 Query: 100 KRLIDAHNQAVDFAVRQVEA-LASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHT 158 R+ DAH AV + +VE A TR+ G E V T NL +A+ H TSRD +PQLHT Sbjct: 115 LRIFDAHTDAVKEVLDEVEKRYAQTRISKKGNREIVNTNNLTVAMIPHHTSRDGDPQLHT 174 Query: 159 HAVVANVTQ-HNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEV 217 HA V N T+ +G+W++L + ++ G LYR+KL +++ +GYE Sbjct: 175 HAFVMNGTKGPDGKWRSLYHEG----------MSHSQWLGSLYRQKLATKLQDIGYELRE 224 Query: 218 VGKHGMWEMPGVP---VEAFSGRSQTIREAV---GEDASLKSRDVAALDTRKSKQHV-DP 270 +E+ G+ ++ FS RSQ I +++ G + + +RDVA L TRKSKQ Sbjct: 225 T--KDSFELAGINKQQIQGFSKRSQQIIKSIQKRGLEVTPSNRDVATLTTRKSKQRTATL 282 Query: 271 EIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSER 330 + +W + G + +TL P G Q+A+ AIA L ++ Sbjct: 283 QAFQTQWKAESIKMGIKVPQA----------KTLNPSSYLGYGSS-QEALDSAIANLEQK 331 Query: 331 KVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDEL 390 +V F+ D+ + + + I + I+ L + FT+ + +E Sbjct: 332 QVSFSREDIYRDSFSRI--QRFDIAQLDQSINGHDK------LLGIEDNFTTLTAIKNES 383 Query: 391 SVRALSRDIMKQNRVTVHPE--KSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRER 448 ++R + + H E + G ++A+ + IV G + Sbjct: 384 NLRQQWDEGQHSVQPLSHNEMKEIENLNPGQTEALRQTLASEDAYQIVQGIR----FKPF 439 Query: 449 VAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGSTVIVD 508 + ELV ++ +V++ + + +++ + + + + F ++D Sbjct: 440 IGELVNQLKDSQIKVEVYSPTETGAVTLQKGYSIDADTVDNAG---DSDNFGNHQLWVID 496 Query: 509 QGEKLSLKETLTLLDGAARHNVQVLI-TDSGQRTGTGSALMAMKDAGVNTYRWQ------ 561 + E L L + LL A ++++ + GS L ++ D G T+ + Sbjct: 497 EAESLDLSQMRDLLKRANSEQARLVLVGGNNSDIKRGSPLRSLMDHGAKTHSLKEIIKES 556 Query: 562 ---------------------------GGEQRPATIISEPDRNVRYARLAGDFAASVKAG 594 + T + E R + +A ++ A Sbjct: 557 KTDIEQAACLINDGHRSDAVELLNNNGYVHEVEETALHEAHRFADLSEIASEYLALSPTE 616 Query: 595 EESVAQVSGVRE-QAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPG 653 + ++ E + + Q IRS++K G LG VT+ L P L R Y+ G Sbjct: 617 QAQTLIITDSDEDKDAIIQEIRSQMKASGQLG-ESVTVAQLIPKNLSKEQRQDISNYQEG 675 Query: 654 MVMEQWNPETRSH----DRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEK 709 ++ Y + V + + L + G S +F Sbjct: 676 DYFRLKRDYKKTPLIKDKLYQVLEV--RENDLQVSSLGGRLYNFDPSEYK-DIEVFGSSS 732 Query: 710 MPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALK 769 + +A G+R++ T +S V ++ + M + E + P + Sbjct: 733 VEIAIGDRIQATANDKTSGLSKKQ-FTVKAIDDGNMVLRDYKDNEQSISLSHPLPIERID 791 Query: 770 LENGWVETPGHSVSDSATVFASVTQMAMDN--ATLNGLARSGRDVRLYSSL 818 + + V + T+ + N + L +++ +DV LY Sbjct: 792 -------AGSETPKKATKVILASTRQSNSNPDSLLGKVSQFVKDVSLYVPD 835 Score = 258 bits (658), Expect = 2e-66, Method: Composition-based stats. Identities = 126/679 (18%), Positives = 257/679 (37%), Gaps = 111/679 (16%) Query: 816 SSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPA--------QQA 867 + + + T + +T+ S++ I ++ P+ Q+A Sbjct: 261 TPSNRDVATLTTRKSKQRTATLQAFQTQWKAESIKMGIKVPQAKTLNPSSYLGYGSSQEA 320 Query: 868 IHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYG 927 + A+ +E K+++FS D+ ++ S +I+R D+ +D + Sbjct: 321 LDSAIANLEQKQVSFSREDIYRDSFS-----------------RIQRFDIAQLDQSINGH 363 Query: 928 TGLL------VSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMIL 981 LL + + + E ++ + EG+ +V PL E+ E L GQ A R L Sbjct: 364 DKLLGIEDNFTTLTAIKNESNLRQQWDEGQHSVQPLSHNEMKEI-ENLNPGQTEALRQTL 422 Query: 982 ETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHR-AVGEMRSAGVDA 1040 + D + +VQG +F+ + + + + +V PT AV + +DA Sbjct: 423 ASEDAYQIVQG-------IRFKPFIGELVNQLKDSQIKVEVYSPTETGAVTLQKGYSIDA 475 Query: 1041 QTLASFLHDTQLQQRSGETPDFSN-TLFLLDESSMVGNTDMARAYALIAAGGGRAVASGD 1099 T+ +G++ +F N L+++DE+ + + M + R V G Sbjct: 476 DTV----------DNAGDSDNFGNHQLWVIDEAESLDLSQMRDLLKRANSEQARLVLVGG 525 Query: 1100 TDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLIN-RDVERALSGLESV 1158 + I G P R A +KEI++++ E LIN A+ L Sbjct: 526 NN--SDIKRGSPLRSLMDHGA-KTHSLKEIIKESKTDIEQAACLINDGHRSDAVELL--- 579 Query: 1159 KPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTG 1218 + + E ++ A+ + F D+ I +Y Sbjct: 580 -----------------------NNNGYVHEVEETALHEAHRFADL-----SEIASEYLA 611 Query: 1219 RTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLS 1278 +P + QTLI+T +ED+ + I + +G+LG E V V L N+ + + +S Sbjct: 612 LSPTEQAQTLIITDSDEDKDAIIQEIRSQMKASGQLG-ESVTVAQLIPKNLSKEQRQDIS 670 Query: 1279 TWETH------RDA--LVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVT 1330 ++ RD L+ + +++ + ++D LQ + RL + + + + Sbjct: 671 NYQEGDYFRLKRDYKKTPLIKDKLYQVLEVREND----LQVSSLGGRLYNFDPSEYKDIE 726 Query: 1331 LYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQA 1390 ++ ++ + GDR++ T +D+ G +TV A+ ++ L D + + Sbjct: 727 VFGSSSVEIAIGDRIQATANDKTSGLSKKQ-FTVKAIDDGNMVLRDYKDNEQSISLSHPL 785 Query: 1391 E-QHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDN 1449 + ID + T A T I R+ + +S +S+ + V +Y + Sbjct: 786 PIERIDAG-SETPKKA-----TKVILA----STRQSNSNPDSLLGKVSQFVKDVSLYVPD 835 Query: 1450 RQGWTDAINNAVQKGTAHD 1468 + + + Q + Sbjct: 836 FSEFKSWLKSFEQSSQTTE 854 >UniRef50_A5VG54 Conjugative relaxase region-like protein n=2 Tax=Sphingomonas wittichii RW1 RepID=A5VG54_SPHWW Length = 1014 Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats. Identities = 221/946 (23%), Positives = 360/946 (38%), Gaps = 126/946 (13%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMG-ERWAGRGAEQLGLQGSVDKDVFTRLLEGR 59 M+S+A VRSA A NY+ D Y V GS W G GAE +GL G V KD F +L G Sbjct: 1 MLSVAGVRSASGAANYFAKDDYYTVEGSSEISAWGGEGAEAIGLSGEVSKDAFEGVLNGI 60 Query: 60 LPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEA 119 LP G ++++++ R GYDLTFS PKS S+MA + GDKR++DA+ AV + VE Sbjct: 61 LPSGEAVAQVEN----RRAGYDLTFSMPKSASVMAYVAGDKRVLDANMAAVKATMAWVEK 116 Query: 120 -LASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ-HNGEWKTLSS 177 LA R +G+ V TGNLV ALF HDTSR +PQ H HAV+AN+T+ +G+W+ L + Sbjct: 117 NLAEGRRDIEGRKVPVQTGNLVYALFQHDTSRALDPQAHIHAVIANLTRMPDGKWQALHA 176 Query: 178 DKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP---VEAF 234 DK+ I G +Y L+ +E +GY+ ++ GKHG +E+ GVP + F Sbjct: 177 DKLWSHNSI---------IGSIYHAFLRAGLERIGYQVDLKGKHGTFEIAGVPKAVIGEF 227 Query: 235 SGRSQTIREAVGEDA--SLKSRDVAALDTRKSKQHV-DPEIKMAEWMQTLKETGFDIRAY 291 S R + I + S + +R K V D W+ GFD + Sbjct: 228 SQRREEILDHATRLGIKSPEGLREITKRSRDPKLDVEDRAALKQGWIDQAAAHGFDGKDL 287 Query: 292 RDAADQRADLR-------------------------------------TLTPGPASQDGP 314 R AA+ RA + L S Sbjct: 288 RAAAEARAGMASSENALERGYRAIVDAVTGARQTLGALLRPQDPLVDNALARAVKSPAEA 347 Query: 315 DVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIP-- 372 Q AV A+ LSER+ + ++L +T L + ++ ID + QLIP Sbjct: 348 RAQLAVASAVRILSEREAAWPV-NLLGKTALDLGLKGVTVDLIERRIDRLVQNRQLIPGV 406 Query: 373 ---LDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTV---------HPEKSVPRTAGYS 420 DR + T+ + E + A + ++ V P G Sbjct: 407 ATAADRTGRMVTTQEALRTEEKILAAVEEGKGKSEPIVAAADAPQRLQDAAERPLNPGQL 466 Query: 421 DAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDE 480 A +++ V G G G+ + + +A E+G + +A + ++ + Sbjct: 467 AAATMILSSADRTVSVQGAAG-TGKSTMLQAVARVAEEEGARITGLAFQNKMVADLAEGA 525 Query: 481 RLSGELITGRRQLLEGMAFTPGST-------------VIVDQGEKLSLKETLTLLDGAAR 527 + + I E + ++VD+ +S E L L A Sbjct: 526 GIKAQTIASFVLANERFVTERDTLGYEAAREKLAGTMLLVDETSMVSSNEMLKLHQITAA 585 Query: 528 HNV-QVLITDSGQRTG---TGSALMAMKDAGVN------TYRWQGGEQRPATIISEPDRN 577 V ++++ Q+ G A ++ G R + + R ++ + Sbjct: 586 LGVDKLVLVGDRQQLSSIDAGKAFAMIQAGGGTMARMDQNIRQRTDQLRTVAALANIGKA 645 Query: 578 VRYARLAGD---------------FAASVKAGEESVAQVSGVRE-QAILTQAIRSELKTQ 621 ++ GD + E+ A + R+ +A++ Q I+ L + Sbjct: 646 GAALKVLGDRVVEAGEPAAAAADMWLELSPGEREATAVFASGRDARAVINQRIQDGLIAE 705 Query: 622 GVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETR----SHDRYVIDRVTAQ 677 G + + +T V YR G +E + RY + +V A Sbjct: 706 GSVKGQAIHLTVFERVNTTREELRYASTYRQGQTLEVGRGGAQDVGIKAGRYDVLKVHAN 765 Query: 678 SHSLTLRDAQGET----QVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGD 733 + L D + Q + + L + + + +G+R+R T + Sbjct: 766 GK-VELSDGRRRIRFDPQKLSPTEQRDRLQLSEKKDLQLREGDRIRWTANDKQRGLHNAA 824 Query: 734 RLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVS--DSATVFAS 791 +V V D + V TL + D + L L ++ + TV +S Sbjct: 825 LARVVGVDADGVKVETAD-KVLLTLSLGDPMLSRLDLAYSLNMHMAQGITTDKAITVMSS 883 Query: 792 VTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVS 837 + + N RD D+ + A +L +P S Sbjct: 884 HERNLSNQRLFNVGVTRVRDELTMVVDDKEKLARQLDMNPGNKTSS 929 Score = 358 bits (917), Expect = 2e-96, Method: Composition-based stats. Identities = 143/658 (21%), Positives = 265/658 (40%), Gaps = 81/658 (12%) Query: 843 RAGETSLETAISHQKSALHTP-AQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGF 901 R + ++ A++ + AQ A+ A+ ++ ++ A+ + L A +G Sbjct: 327 RPQDPLVDNALARAVKSPAEARAQLAVASAVRILSEREAAWPVNLLGKTALDLGLKGVTV 386 Query: 902 TELGGEINAQIKRGDLLYVDVAKGYGTGL-LVSRASYEAEKSILRHILEGKEAVMPLM-- 958 + I+ ++ L+ TG + ++ + E+ IL + EGK P++ Sbjct: 387 DLIERRIDRLVQNRQLIPGVATAADRTGRMVTTQEALRTEEKILAAVEEGKGKSEPIVAA 446 Query: 959 ----ERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPE 1014 +R+ L GQ AA MIL ++DR VQG AG GK+T AV + E Sbjct: 447 ADAPQRLQDAAERPLNPGQLAAATMILSSADRTVSVQGAAGTGKSTML----QAVARVAE 502 Query: 1015 SERPRVVGLGPTHRAVGEMRS-AGVDAQTLASFLHDTQLQQRSGET-------PDFSNTL 1066 E R+ GL ++ V ++ AG+ AQT+ASF+ + +T + T+ Sbjct: 503 EEGARITGLAFQNKMVADLAEGAGIKAQTIASFVLANERFVTERDTLGYEAAREKLAGTM 562 Query: 1067 FLLDESSMVGNTDMARAYALIAAGG-GRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAI 1125 L+DE+SMV + +M + + + AA G + V GD QL +I G+ F + Q +A Sbjct: 563 LLVDETSMVSSNEMLKLHQITAALGVDKLVLVGDRQQLSSIDAGKAFAMIQA-GGGTMAR 621 Query: 1126 MKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEA 1185 M + +RQ + V +L N + +A + L+ + V E A A Sbjct: 622 MDQNIRQRTDQLRTVAALAN--IGKAGAALKVLGDRVVEAGEPAAAAADM---------- 669 Query: 1186 KLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIH 1245 + +P RE T + + R V+N I Sbjct: 670 ------------------------------WLELSPGEREATAVFASGRDARAVINQRIQ 699 Query: 1246 DVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNV--------YHRI 1297 D G + + + + V N ELR ST+ + V + + Sbjct: 700 DGLIAEGSVKGQAIHLTVFERVNTTREELRYASTYRQGQTLEVGRGGAQDVGIKAGRYDV 759 Query: 1298 AGISKDDGLITLQDAEGNTRL----ISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRE 1353 + +G + L D R +SP E + + L +++ GDR+R+T +D++ Sbjct: 760 LKV-HANGKVELSDGRRRIRFDPQKLSPTEQR-DRLQLSEKKDLQLREGDRIRWTANDKQ 817 Query: 1354 RGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFA 1413 RG ++ V V D V + + + +DLAY++ H AQG + A Sbjct: 818 RGLHNAALARVVGVDADGVKVETADKVLLTLSLGDPMLSRLDLAYSLNMHMAQGITTDKA 877 Query: 1414 IALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAIN-NAVQKGTAHDVF 1470 I + + + ++ V ++R++ + + D+++ ++ N K ++ + Sbjct: 878 ITVMS--SHERNLSNQRLFNVGVTRVRDELTMVVDDKEKLARQLDMNPGNKTSSLETL 933 >UniRef50_A3ZVN0 Putative uncharacterized protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZVN0_9PLAN Length = 967 Score = 410 bits (1053), Expect = e-112, Method: Composition-based stats. Identities = 199/934 (21%), Positives = 345/934 (36%), Gaps = 117/934 (12%) Query: 1 MMSIAQVRSAGSAGNYYTD---KDNYYVLGSMGERWAGRGAEQLGLQ--GSVDKDVFTRL 55 M+ Q +S Y+ + +YY+ + W GRGAE LGL V K+ F L Sbjct: 1 MLIATQGKSVSGTQQYFDQVLTRGDYYLGQEVAGHWHGRGAEVLGLGAGSQVKKEEFNAL 60 Query: 56 LEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVR 115 LEG+ P ++ +R RPG DLTFS PKSVS+ + D+R+++ AV +R Sbjct: 61 LEGKHPTTGKRLTQRNRKDR-RPGMDLTFSVPKSVSLAWAINEDERILEMLQAAVQETMR 119 Query: 116 -QVEALASTRVMTDGQS---ETVLTGNLVMALFNHDTSR----DQEPQLHTHAVVANVTQ 167 VE L RV T + + TG L+ A F H TSR +P LH HA V N T+ Sbjct: 120 RDVEPLMQRRVRTGRHAFTQQKEATGKLIYADFLHKTSRPVEGAADPHLHIHAFVVNWTE 179 Query: 168 HNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVE-ALGYETEVV------GK 220 +G+ G E + + + + +L +++ LGYE E V Sbjct: 180 QDGK---------HFAGEFEEIVRQRPSLQAKFEARLARKMQHELGYEVEHVHYAQGGKL 230 Query: 221 HGMWEMPGV---PVEAFSGRSQTIREAVGEDA--SLKSRDVAALDTRKSKQH-VDPEIKM 274 WE+ GV +E FS R+ + + E A + + TR+ K + Sbjct: 231 KWGWELRGVERATIEKFSRRTTQVEQYAEEHAIHDAERKGKLGKLTREKKDTGQSIDQLR 290 Query: 275 AEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQF 334 ++W L ++RA L DG Q A ++ E + Sbjct: 291 SQWRARL------------TPEERAAFAGLLQTTERADGKSEQAAARNSVQYALEHHLYR 338 Query: 335 TYTDVLARTVGILPPENGVI--ERARAGIDEAISREQLIPLDREKGLFTSGIHVLD-ELS 391 T + VG + E A ID ++ + D K F + VL+ E Sbjct: 339 QSTVERHQVVGAALEHGLTLSPEAVEAEIDRMDLIQRTLDADGTKRQFITTKEVLNAERE 398 Query: 392 VRALSRDIMKQNRVTVHPEKSVPRTA---GYSDAVSVLAQDRPSLAIVSGQGGAAGQRER 448 + A +RD + E R DAV + + R ++ V+G G G+ Sbjct: 399 MIAYARDGRGTRKSISSTEHEFQREWLNEQQRDAVCFVLESRDAVLAVAGGAG-TGKSSL 457 Query: 449 VAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGSTVIVD 508 + E V ++ G+EV A ++ +++ + + + + + +D Sbjct: 458 MEEAVDAIQQNGKEVFTFAPSTGAREVLEEKGFRKAQTVEHLLRNSKLHPELKDQVIWID 517 Query: 509 QGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGT---GSALMAM-KDAGVNTYRWQGGE 564 + L ++ + A N +V+++ ++ + G A+ + ++AG+N R + + Sbjct: 518 EAGLLDVRSMNGVFRIAKEQNARVVLSGDTRQHASPRRGEAMRLLEQEAGLNVARVEAIQ 577 Query: 565 QRPAT-----------------------------------IISEPDRNVRYARLAGDFAA 589 ++ I E RY LA ++ Sbjct: 578 RQQGRYRQAVEMISRGQEVVDARTGKTGLLAGFDLLDAMGKIKEVATADRYQLLADNYLK 637 Query: 590 SVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDM 649 S G+ ++ RE A +T IR LK G L E + L + Sbjct: 638 SEANGKSTLVVAPTHREAAAVTSEIRDRLKQDGKLATEERAFVQYRSLNLSEAEKGDAKT 697 Query: 650 Y--RPGMVMEQWNPETRSHDRYVIDRVTAQSHS-LTLRDAQGETQVVRISSLDSSWSLFR 706 Y + +V++ R RVT ++ + L G + + ++ Sbjct: 698 YSEQTDLVVQFHQNVKGGFQRGERYRVTGLNNGEVQLVPLSGGEMKKLPQAASDRFEVYA 757 Query: 707 PEKMPVADGERLRV----TGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSD 762 ++ VA G++LR T K R+S G +V V+ G + Sbjct: 758 ERELRVAAGDKLRFSLGGTTKNGKGRISNGRLDEVKGFDASGNIVLKNGWTIDS------ 811 Query: 763 SPFTALKLENGWVETPGHSV-SDSATVFASVTQMAM----DNATLNGLARSGRDVRLYSS 817 + L+ G+V T S D A++ ++ ++R DV +Y Sbjct: 812 ---SYAHLDLGYVVTSHASQGKDRHVAIAAMGSESLPAINAKQFYVTVSRGREDVAIY-- 866 Query: 818 LDETRTAEKLARHPSFTVVSEQIKTRAGETSLET 851 +D+ K + + Q+ +RA ++ T Sbjct: 867 VDDKARVRKAIERSGEQLSATQMLSRAASETMAT 900 Score = 339 bits (869), Expect = 6e-91, Method: Composition-based stats. Identities = 137/741 (18%), Positives = 265/741 (35%), Gaps = 86/741 (11%) Query: 795 MAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARH-----------PSFTVVSEQIKTR 843 ++ AT+ +R V Y+ AE+ + S + Q + R Sbjct: 237 RGVERATIEKFSRRTTQVEQYAEEHAIHDAERKGKLGKLTREKKDTGQSIDQLRSQWRAR 296 Query: 844 AGETSLETAISHQKS-------ALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAA 896 ++ + A+ ++ AL ++ ++ A Sbjct: 297 LTPEERAAFAGLLQTTERADGKSEQAAARNSVQYALEHHLYRQSTVERHQVVGAALEHGL 356 Query: 897 EGTGFTELGGEINAQIKRGDLLYVDV-AKGYGTGLLVSRASYEAEKSILRHILEGKEAVM 955 + + A+I R DL+ + A G + ++ AE+ ++ + +G+ Sbjct: 357 TLS-----PEAVEAEIDRMDLIQRTLDADGTKRQFITTKEVLNAEREMIAYARDGRGTRK 411 Query: 956 PLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPES 1015 + E L QR A +LE+ D V G AG GK++ + A+ Sbjct: 412 SISSTEHEFQREWLNEQQRDAVCFVLESRDAVLAVAGGAGTGKSSLMEEAVDAIQQ---- 467 Query: 1016 ERPRVVGLGPTHRAVGEMRSAGV-DAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSM 1074 V P+ A + G AQT+ L +++L P+ + + +DE+ + Sbjct: 468 NGKEVFTFAPSTGAREVLEEKGFRKAQTVEHLLRNSKLH------PELKDQVIWIDEAGL 521 Query: 1075 VGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTP 1134 + M + + R V SGDT Q + G+ RL + + +VA ++ I RQ Sbjct: 522 LDVRSMNGVFRIAKEQNARVVLSGDTRQHASPRRGEAMRLLEQEAGLNVARVEAIQRQQG 581 Query: 1135 ELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKA 1194 R+AV + V + + LA Sbjct: 582 RYRQAVEMISRGQ---------------------------EVVDARTGKTGLLAGF-DLL 613 Query: 1195 MLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGEL 1254 G+ Y+ + +Y ++ + TL+V + + + S I D ++ G+L Sbjct: 614 DAMGKIKEVATADRYQLLADNYL-KSEANGKSTLVVAPTHREAAAVTSEIRDRLKQDGKL 672 Query: 1255 GKEQVMVPVLNTANIRDGELRRLSTWETHRDALV---------LVDNVYHRIAGISKDDG 1305 E+ + N+ + E T+ D +V +R+ G+ ++G Sbjct: 673 ATEERAFVQYRSLNLSEAEKGDAKTYSEQTDLVVQFHQNVKGGFQRGERYRVTGL--NNG 730 Query: 1306 LITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVT 1365 + L G P +A ++ +Y +RV GD++RF+ G N ++ Sbjct: 731 EVQLVPLSGGEMKKLP-QAASDRFEVYAERELRVAAGDKLRFSLG----GTTKNGKGRIS 785 Query: 1366 AVSGDSVTLSDGQQTREIRPGQ--EQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNR 1423 D V D ++ G + + H+DL Y +T+H +QG AIA G+E Sbjct: 786 NGRLDEVKGFDASGNIVLKNGWTIDSSYAHLDLGYVVTSHASQGKDRHVAIAAMGSESLP 845 Query: 1424 KLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAER 1483 + + YV +SR ++ V +Y D++ AI + ++ +A + A Sbjct: 846 AI--NAKQFYVTVSRGREDVAIYVDDKARVRKAIERSGEQLSATQMLS--RAASETMATT 901 Query: 1484 LFSTARELRDVAAGRAVLRQA 1504 R+ + R++L Sbjct: 902 SRQAERQHKQTIERRSLLGSF 922 >UniRef50_UPI00016C4B0F TrwC protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4B0F Length = 882 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 197/922 (21%), Positives = 323/922 (35%), Gaps = 113/922 (12%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRL 60 M+ I Q A +A YY D Y + W GRGA LGL G V ++ F L + Sbjct: 1 MLRIVQQSHANAAKGYYAQSDYYVDGAELPGAWGGRGAALLGLSGEVQREDFHALCDNHD 60 Query: 61 PDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEAL 120 P + S R YD +F PK+VS++ LGGD+R++D AV + ++E Sbjct: 61 PRSGRQLTARTKSERTVL-YDWSFDVPKAVSLLYELGGDERILDVFRGAVQDTMNEIEPE 119 Query: 121 ASTRVMTDGQSETVLTGNLVMALFNHDTSRD------QEPQLHTHAVVANVT--QHNGEW 172 TRV G +E TGN+ A+F H TSR +PQLH H V N T + G W Sbjct: 120 TQTRVRKGGAAEDRTTGNMAWAMFVHRTSRPSKEDLKPDPQLHAHVTVFNATWDRDEGRW 179 Query: 173 KTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP-- 230 K ++ + + + +L + LGY E GK W + G+ Sbjct: 180 KATQH---------RDLKRDAPYWQEAFHARLAAGLGDLGYGIERRGKD--WSIAGISPT 228 Query: 231 -VEAFSGRSQTIREAVGEDASLKSRDVAALD--TRKSKQHVDPEIKMAEWMQTLKETGFD 287 + FS R I + A L +R +K E + W L Sbjct: 229 LEKKFSRRRTEIDALAEKLGMTDPAQRATLGATSRLNKVDDGIESLRSYWRGRLDG---- 284 Query: 288 IRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTV--- 344 ++ A+ + G A V+ AV ++A ER +LA + Sbjct: 285 ----KEQAELDGVRKAAEGGLAPSRAVSVEDAVRYSMAHHFERDAVVPEKRLLAEALRYG 340 Query: 345 -GILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQN 403 G++ PE E R G Q + TS + +E + + +RD Sbjct: 341 IGVVRPEGLRAEAERQGALTTTLDGQRVT--------TSRAVLAEEQKLLSFARDGRGTC 392 Query: 404 RVTV--HPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGR 461 H + +A AV + + + G G AG+ + E V R G Sbjct: 393 VPIAANHRLRRDWLSAEQQGAVRHVLGSSDRVVLARGVAG-AGKTTLIQEAVEEIRAAGL 451 Query: 462 EVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTL 521 V ++A + ++ ++ + + + A G + VD+ L + + + Sbjct: 452 PVAVLAPTALAARDVLREHFAESDTVAAFLTDEKAQARMRGGVIWVDEAGLLGVHDLAQV 511 Query: 522 LDGAARHNVQVLITDSGQRTGT---GSALMAMKD------AGVNTYRWQGGEQRPATIIS 572 + A + +V++ ++ + G AL ++ A V R Q + A Sbjct: 512 FEVAREQDARVVLMGDTRQHRSVARGPALSLLESHAGLPVAEVKDIRRQKAAYKQAVEHL 571 Query: 573 EPDR------------------NVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAI 614 R R A +A D+ + G+ ++ +E +T AI Sbjct: 572 AAGRTEDGFAALDVLGWVREAGEDRNATIATDYMVATGGGQTALVVAPTHKEGEAVTAAI 631 Query: 615 RSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRS--HDRYVID 672 R K G LG E L P+ L R R YR G V++ R + Sbjct: 632 RERRKAAGQLG-EERAFNRLVPLNLTEAERADRHAYRGGEVLQFVRGAKGHVAGSRLAVT 690 Query: 673 RVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIP---GLRV 729 A SL + +R ++ VA G+ +R+T G R+ Sbjct: 691 EPEAV-----------------PVSLAGRFQAYRRAELKVAVGDVIRLTAGGKASDGSRL 733 Query: 730 SGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSA-TV 788 S G V + + G+ PA L +G+ T S + V Sbjct: 734 SNGTTFTVTGFTATGDLQLDTGKILPAGFG---------HLAHGYASTSHASQGRTVDRV 784 Query: 789 FASVTQ----MAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRA 844 + + ++R+ R +Y+ D+ E + R ++ I R Sbjct: 785 LIAQPADTFVASTREQFYVSVSRARRLATIYTD-DKNALREAVQRAECRVSATDLIAFRG 843 Query: 845 GETSLETAISHQKSALHTPAQQ 866 + Q+ A A+Q Sbjct: 844 PKQLNRRVTFLQRLASLARARQ 865 Score = 315 bits (807), Expect = 8e-84, Method: Composition-based stats. Identities = 130/651 (19%), Positives = 234/651 (35%), Gaps = 81/651 (12%) Query: 865 QQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAK 924 + A+ ++ + LL EA + L E Q G L Sbjct: 310 EDAVRYSMAHHFERDAVVPEKRLLAEALRYGIGVVRPEGLRAEAERQ---GAL----TTT 362 Query: 925 GYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETS 984 G + SRA E+ +L +G+ +P+ + L++ Q+ A R +L +S Sbjct: 363 LDGQRVTTSRAVLAEEQKLLSFARDGRGTCVPIAAN-HRLRRDWLSAEQQGAVRHVLGSS 421 Query: 985 DRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAV-GEMRSAGVDAQTL 1043 DR + +G AG GKTT + + + + V L PT A +R ++ T+ Sbjct: 422 DRVVLARGVAGAGKTTLIQEAVEEIR----AAGLPVAVLAPTALAARDVLREHFAESDTV 477 Query: 1044 ASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQL 1103 A+FL D + Q R + +DE+ ++G D+A+ + + R V GDT Q Sbjct: 478 AAFLTDEKAQAR------MRGGVIWVDEAGLLGVHDLAQVFEVAREQDARVVLMGDTRQH 531 Query: 1104 QAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQV 1163 +++A G L ++ + VA +K+I RQ ++AV L E + L+ + Sbjct: 532 RSVARGPALSLLESHAGLPVAEVKDIRRQKAAYKQAVEHLAAGRTEDGFAALDVL----- 586 Query: 1164 PRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEA 1223 + I DY T Sbjct: 587 -----------------------------------GWVREAGEDRNATIATDYMVAT-GG 610 Query: 1224 REQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETH 1283 + L+V +++ + + I + R+ AG+LG E+ L N+ + E + Sbjct: 611 GQTALVVAPTHKEGEAVTAAIRERRKAAGQLG-EERAFNRLVPLNLTEAERADRHAYR-G 668 Query: 1284 RDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGD 1343 + L V +AG L E +S +A Y ++V GD Sbjct: 669 GEVLQFVRGAKGHVAGSR-------LAVTEPEAVPVS----LAGRFQAYRRAELKVAVGD 717 Query: 1344 RMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAH 1403 +R T + S + + + G + H+ YA T+H Sbjct: 718 VIRLTAGGKASD---GSRLSNGTTFTVTGFTATGDLQLDTGKILPAGFGHLAHGYASTSH 774 Query: 1404 GAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQK 1463 +QG + L + + + E YV++SR ++ +YTD++ +A+ A + Sbjct: 775 ASQGRTVDRV--LIAQPADTFVASTREQFYVSVSRARRLATIYTDDKNALREAVQRAECR 832 Query: 1464 GTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPAR 1514 +A D+ R R + + L +A R + A + R Sbjct: 833 VSATDLIA---FRGPKQLNRRVTFLQRLASLARARQFEAELAHARDERTGR 880 >UniRef50_A9KH87 DNA helicase n=9 Tax=Coxiella burnetii RepID=A9KH87_COXBN Length = 875 Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats. Identities = 168/646 (26%), Positives = 291/646 (45%), Gaps = 49/646 (7%) Query: 835 VVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSF 894 Q+ + + ++A++ + V+ S++ F+ ++ ++ S+ Sbjct: 13 QKLTQLLIETKKPLASELTRLPYQEEPSMTKKAVNYGISVIASREATFTYQSVVEKSLSY 72 Query: 895 AAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAV 954 F + ++ ++K G+L+ G LL ++ + E++I+ I GK V Sbjct: 73 GNANVSFKAVQIDLRERVKSGELMTRQSPSG--DVLLATKETVALEQTIIDQIKSGKNTV 130 Query: 955 MPLM---ERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNM 1011 P + E LT GQ+AA ++ T DRF +VQGYAG GK+T + + A++ Sbjct: 131 TPFLLKDEIQHKLDASSLTEGQKAACTLLATTQDRFVMVQGYAGTGKSTMLQTLQDALSQ 190 Query: 1012 LPESERPRVVGLGPTHRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDE 1071 + ++ L PTH+AV E++S G++AQT+ SFL + N L LLDE Sbjct: 191 SNIINKESIIALAPTHKAVKELQSKGIEAQTVKSFLVGEAHLSLN-NYRHLDNKLILLDE 249 Query: 1072 SSMVGNTDMARAYALIAAG-GGRAVASGDTDQLQAIAPGQPFRL--QQTRSAADVAIMKE 1128 SSMVGN D + +++ GD QL ++ G+P + + A M E Sbjct: 250 SSMVGNRDFQQLQSIVEKAKNCHCAYIGDKAQLLSVEDGKPAEIAYLSREADIATATMSE 309 Query: 1129 IVRQT-PELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKL 1187 ++RQ PEL++ L+ +S ESV + ++ W + E S ++ + Sbjct: 310 VLRQKDPELKKITQELM-------MSTPESVDRALTQLKQNGWV----IEESSVDRKGPI 358 Query: 1188 AEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDV 1247 +++ QK I Y + E R T+I NE+R+ +N I + Sbjct: 359 SDSVQK------------------IAEHYCALSLEERTNTVIAAATNENRQTINEAIRVI 400 Query: 1248 REKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLI 1307 R+ GEL E V +L + + D EL + +V ++N Y ++ + D + Sbjct: 401 RQGKGELQGEFVTTTLLMDSRLTDAELHHSPNYTVG--DVVRLNNQYLTVSKTNHDKNTL 458 Query: 1308 TLQDAEGNTRLISPREA-VAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTA 1366 L+D + ++++ E V L+ +T + +GD +++TKSD+ERG VA+ VT Sbjct: 459 ILEDGDKQNKVLNLDLMPKRETVELFHRETTHIQSGDILKWTKSDKERGLVAHESLRVTH 518 Query: 1367 VSGDSVT---LSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNR 1423 V+ T LS+ + I Q QHID YA T HG QGA+ + L + Sbjct: 519 VNKAEHTITALSEKSEHLSIDLNQ-PQNQHIDYNYAPTVHGLQGATAQSILILLD--SHN 575 Query: 1424 KLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAV-QKGTAHD 1468 L YVA++R V+++TDN + I + K +A + Sbjct: 576 SLSNTMRLLYVAVTRSTHQVRIFTDNLEAVRFQIIHEKGDKKSALE 621 Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats. Identities = 81/642 (12%), Positives = 191/642 (29%), Gaps = 75/642 (11%) Query: 303 TLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGID 362 LT P ++ ++AV I+ ++ R+ FTY V+ +++ N + + + Sbjct: 29 ELTRLPYQEEPSMTKKAVNYGISVIASREATFTYQSVVEKSLSYGNA-NVSFKAVQIDLR 87 Query: 363 EAISREQLIPLDREKG--LFTSGIHVLDELSVRALSRDIMKQNRV------TVHPEKSVP 414 E + +L+ G L + V E ++ + H + Sbjct: 88 ERVKSGELMTRQSPSGDVLLATKETVALEQTIIDQIKSGKNTVTPFLLKDEIQHKLDASS 147 Query: 415 RTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGR----EVQIIAADR 470 T G A ++LA + +V G G G+ + L + + +A Sbjct: 148 LTEGQKAACTLLATTQDRFVMVQGYAG-TGKSTMLQTLQDALSQSNIINKESIIALAPTH 206 Query: 471 RSQMNMK----QDERLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAA 526 ++ ++ + + + L+ L +++D+ + ++ L Sbjct: 207 KAVKELQSKGIEAQTVKSFLVGEAHLSLNNYRHLDNKLILLDESSMVGNRDFQQLQSIVE 266 Query: 527 RHN----------VQVLITDSGQ----------------------RTGTGSALMAMK--- 551 + Q+L + G+ R + Sbjct: 267 KAKNCHCAYIGDKAQLLSVEDGKPAEIAYLSREADIATATMSEVLRQKDPELKKITQELM 326 Query: 552 -------DAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGV 604 D + + G +++ + + ++A + A + + Sbjct: 327 MSTPESVDRALTQLKQNGWVIEESSVDRKGPISDSVQKIAEHYCALSLEERTNTVIAAAT 386 Query: 605 RE-QAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPET 663 E + + +AIR + +G L VT T L L + Y G V+ N Sbjct: 387 NENRQTINEAIRVIRQGKGELQGEFVTTTLLMDSRLTDAELHHSPNYTVGDVVRLNN--- 443 Query: 664 RSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSS--WSLFRPEKMPVADGERLRVT 721 + + ++L L D + +V+ + + LF E + G+ L+ T Sbjct: 444 ---QYLTVSKTNHDKNTLILEDGDKQNKVLNLDLMPKRETVELFHRETTHIQSGDILKWT 500 Query: 722 GKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPG-- 779 + + L+V V++ T+ + P ++ + T Sbjct: 501 KSDKERGLVAHESLRVTHVNKAEHTITALSEKSEHLSIDLNQPQNQ-HIDYNYAPTVHGL 559 Query: 780 HSVSDSATVFASVTQMAMDNA---TLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVV 836 + + + + ++ N + RS VR+++ E + + Sbjct: 560 QGATAQSILILLDSHNSLSNTMRLLYVAVTRSTHQVRIFTDNLEAVRFQIIHEKGDKKSA 619 Query: 837 SEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESK 878 E I + + + + + Sbjct: 620 LETIGLLTMREEQPLSPDSKNVNANATSSNHYFKKASHKSER 661 >UniRef50_Q2NBK6 TrwC protein n=7 Tax=Sphingomonadales RepID=Q2NBK6_ERYLH Length = 970 Score = 391 bits (1005), Expect = e-106, Method: Composition-based stats. Identities = 216/975 (22%), Positives = 373/975 (38%), Gaps = 128/975 (13%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSM--GERWAGRGAEQLGLQGSVDKDVFTRLLEG 58 M+S+A VRS +A +Y+ DNYY +W G GA +LGL G V+ VF LL+G Sbjct: 1 MLSVANVRSPSAAASYFAS-DNYYASADADRSGQWVGEGARRLGLDGKVEAAVFDALLQG 59 Query: 59 RLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVE 118 LPDG+ + + HRPG DLTFS PKS S++A++G D+R+I A+ +AV A+ E Sbjct: 60 ELPDGSSVG---NPGQTHRPGTDLTFSVPKSWSLLALVGKDERIIAAYREAVLEALHWAE 116 Query: 119 ALAS-TRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ-HNGEWKTLS 176 A+ TR++ G+ T TG+L + LF HDT+R+QEP LH HAV+ANVTQ +G+W+TL Sbjct: 117 KNAAETRMVEKGKIVTQATGSLAIGLFQHDTNRNQEPNLHFHAVIANVTQGKDGKWRTLK 176 Query: 177 SDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVE---A 233 +D++ + + + + VE LGYE KHG +E G+ E A Sbjct: 177 NDRLWQLNT---------TLNSIAMARFRVAVEKLGYEPGPTLKHGNFEARGITREQVMA 227 Query: 234 FSGRSQTIREAVGEDASLKSRDVAALDTRKSKQHV-DPEIKMAEWMQTLKETGFDIRAYR 292 FS R Q + +A L++ +AALDTR SK + D E W +T K G D+ Sbjct: 228 FSSRRQEVLDAR-RGPGLEAGRIAALDTRASKDTIEDRETLGKLWSETAKSIGLDLAPLV 286 Query: 293 DAADQRADLRTLTPG-----------------------------PASQDGPD-----VQQ 318 + A R +++ G P S D Q Sbjct: 287 ERARIRTLKQSIETGRFGSLVERGRAWLGRFAAHVRGDPADPLVPKSVLRQDRETIAAAQ 346 Query: 319 AVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLI-PLDREK 377 AV A+ LS+R+ F T + + P I + LI K Sbjct: 347 AVASAVRHLSQREAAFERTALYKAALDFGLP--ATIADIEKRTRALVRSGDLIVGKGDHK 404 Query: 378 GLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPR-------------TAGYSDAVS 424 G S V+ E + + + V + R G A Sbjct: 405 GWLASRDAVIAEQRILSEVAAGKGASSSAVETGSATARVQAAAMAGQGFRLNEGQLGAAK 464 Query: 425 VLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSG 484 ++ V G G AG+ + + + R +GR V +A +++D ++ Sbjct: 465 LILTSEDRTIAVQGIAG-AGKSSVLKPVAEVLRAEGRPVIGLAIQNTLVQMLERDTGIAS 523 Query: 485 ELITGRR--------------QLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNV 530 + + LE A +++D+ +S ++ L+ A V Sbjct: 524 QTLARFLGGWNKLLDDPGNAVLRLEAKAALKDHVLVLDEASMISNEDKEKLVRLANLAGV 583 Query: 531 -QVLITDSGQRTG---TGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRY------ 580 ++++ ++ G G ++ G+ + +I E + Sbjct: 584 HRLVLMGDRKQLGAVDAGKPFALLQRTGMARAEMATNLRARDPVIREAQAAAQAGDVRTA 643 Query: 581 ---------------ARLAGDFAASVKAGE--ESVAQVSGVREQAILTQAIRSELKTQGV 623 A +A D ++ + + SG ++ + AI+ L G Sbjct: 644 LRHLQPHTVEAKGDGALVAADIWLALDKDDRARTSIYASGRAIRSAVNAAIQQGLLANGE 703 Query: 624 LGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETR---SHDRYVIDRVTAQSHS 680 +G + + L V Y+PG V+E + S Y + + Sbjct: 704 IGPGKAELGVLDRVNTTREELRHLSAYQPGRVLEVSRKQQALGLSAGEYRVLGQDRKGRQ 763 Query: 681 LTLRDAQGETQVVRIS-----SLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRL 735 + + D +G+ + D + +L P K+ + +G+R+R T + D+ Sbjct: 764 VEVADKRGKRFRFDPARIRAGKGDQNLTLHEPRKLEIHEGDRIRWTRNDHRRGLFNADQA 823 Query: 736 QVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQ- 794 +V +V +T + + L D + L ++ + ++ Sbjct: 824 RVVAVVGGKVTFETS-KGDQVELKKDDPMLKRIDLAYALNAHMAQGLTSDRGIAVMDSRE 882 Query: 795 --MAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETA 852 ++ L + R + L + A +AR+ + ++ + T + Sbjct: 883 RNLSNQKTFLVTITRLRDHLTLVVDSSDRLGAV-VARNKGEKASALEVTAQLTPTEKKNG 941 Query: 853 -ISHQKSALHTPAQQ 866 + K A++ Sbjct: 942 ELDQLKPEEANKAEK 956 Score = 358 bits (919), Expect = 1e-96, Method: Composition-based stats. Identities = 159/669 (23%), Positives = 250/669 (37%), Gaps = 84/669 (12%) Query: 873 PVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLV 932 + ++ AF L A F ++ A ++ GDL+ V KG G L Sbjct: 353 RHLSQREAAFERTALYKAALDFGLP-ATIADIEKRTRALVRSGDLI---VGKGDHKGWLA 408 Query: 933 SRASYEAEKSILRHILEGKEAVMPLME----------RVPGELMEKLTSGQRAATRMILE 982 SR + AE+ IL + GK A +E +L GQ A ++IL Sbjct: 409 SRDAVIAEQRILSEVAAGKGASSSAVETGSATARVQAAAMAGQGFRLNEGQLGAAKLILT 468 Query: 983 TSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM-RSAGVDAQ 1041 + DR VQG AG GK++ + V + +E V+GL + V + R G+ +Q Sbjct: 469 SEDRTIAVQGIAGAGKSSVLKPVAEVLR----AEGRPVIGLAIQNTLVQMLERDTGIASQ 524 Query: 1042 TLASFLHDTQLQQRSGETPDF--------SNTLFLLDESSMVGNTDMARAYALIAAGGG- 1092 TLA FL + + +LDE+SM+ N D + L G Sbjct: 525 TLARFLGGWNKLLDDPGNAVLRLEAKAALKDHVLVLDEASMISNEDKEKLVRLANLAGVH 584 Query: 1093 RAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERAL 1152 R V GD QL A+ G+PF L Q A + + + P +REA + DV AL Sbjct: 585 RLVLMGDRKQLGAVDAGKPFALLQRTGMARAEMATNLRARDPVIREAQAAAQAGDVRTAL 644 Query: 1153 SGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAI 1212 L+ H+ EAK A A + Sbjct: 645 RHLQ-----------------------PHTVEAKGDGALVAADI---------------- 665 Query: 1213 VRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDG 1272 + + R +T I R +N+ I GE+G + + VL+ N Sbjct: 666 ---WLALDKDDRARTSIYASGRAIRSAVNAAIQQGLLANGEIGPGKAELGVLDRVNTTRE 722 Query: 1273 ELRRLSTWETHRDALVLVDNV-------YHRIAGISKDDGLITLQDAEGNTRLISPREAV 1325 ELR LS ++ R V +R+ G + + + D G P Sbjct: 723 ELRHLSAYQPGRVLEVSRKQQALGLSAGEYRVLGQDRKGRQVEVADKRGKRFRFDPARIR 782 Query: 1326 A----EGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTR 1381 A + +TL+ P + + GDR+R+T++D RG V AV G VT + + Sbjct: 783 AGKGDQNLTLHEPRKLEIHEGDRIRWTRNDHRRGLFNADQARVVAVVGGKVTFETSKGDQ 842 Query: 1382 EIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQ 1441 + + IDLAYA+ AH AQG + IA+ + ++ ++ V ++R++ Sbjct: 843 VELKKDDPMLKRIDLAYALNAHMAQGLTSDRGIAVMD--SRERNLSNQKTFLVTITRLRD 900 Query: 1442 HVQVYTDNRQGWTDAINN-AVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAV 1500 H+ + D+ + +K +A +V E N E E A Sbjct: 901 HLTLVVDSSDRLGAVVARNKGEKASALEVTAQLTPTEKKNGELDQLKPEEANKAEKELAR 960 Query: 1501 LRQAGLAGG 1509 + L G Sbjct: 961 SKSKTLDFG 969 >UniRef50_A3VN00 TrwC protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VN00_9PROT Length = 994 Score = 391 bits (1003), Expect = e-106, Method: Composition-based stats. Identities = 218/968 (22%), Positives = 369/968 (38%), Gaps = 134/968 (13%) Query: 20 KDNYYVLGS---MGERWAGRGAEQLGLQGSVDKDVFTRLLEGRLPDGADLSRMQDGSNR- 75 KDNYY G W G+GA LGL+G V+ + F R+L G DG + + + + Sbjct: 20 KDNYYAKGGDAPEPSSWFGKGAASLGLKGGVETETFERVLNGETLDGRRVGQREGETAEQ 79 Query: 76 -----HRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEA-LASTRVMTD- 128 HRPG DLTFS PK VS++ +GGDKR++ AH AVD ++ E LA TR+ T Sbjct: 80 AQARAHRPGIDLTFSPPKDVSLLLYIGGDKRILGAHRAAVDQTLKWAERNLAGTRIRTGP 139 Query: 129 GQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ-HNGEWKTLSSDKVGKTGFIE 187 + V TGNLV+A F HD SRD++PQLHTHAV+AN+T+ +G W+ L +D Sbjct: 140 SATPAVKTGNLVIARFEHDISRDKDPQLHTHAVIANITKTDDGRWRALHNDPF------- 192 Query: 188 NVYANQIAFGRLYREKLKEQVEALGYETEV-VGKHGMWEMPGVP---VEAFSGRSQTIRE 243 +A++ Y L+ + LGY ++ GK G + + GVP FS I Sbjct: 193 --FAHRKTLSLAYDATLRNALRELGYRVKLEDGKSGRYSVDGVPDGARAEFSKGKDRIDS 250 Query: 244 AV--GEDASLKSRDVAALDTRKSKQHVD-------PEIKMAEWMQTLKET---------- 284 A + + +RD A+ TR +K + E + A W TL+ T Sbjct: 251 AAVGLKHPTPSARDKLAVKTRPAKDELRQEERVALRETRGAPWKATLEHTVAVSVERQAQ 310 Query: 285 ------------------GFDIRAYRDAADQRADLRTLTPGP------ASQDGPDVQQAV 320 G R ++ LR P AS+ G + AV Sbjct: 311 GHLQRPLDDRAVGRVGMEGLARRMAQNLFRPTKTLRLSENDPYKLERAASEKGYSARAAV 370 Query: 321 TQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLF 380 + + ER+ F+ V + + + R +R+ L+ Sbjct: 371 SFGLRHHEEREAAFSLHHVRRTALEHAADGVTLRDIDRELRFLRANRKLLVNAKDPNAES 430 Query: 381 TSGIHVLDELSVRALSRDIMKQN-----RVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAI 435 T+ + E +L +D + + +S T G A+ ++ L Sbjct: 431 TTKRSLTHEERTLSLLQDAGRTGPLVPEQTLRSALESTHLTGGQKAAIGLILGGPNRLVG 490 Query: 436 VSGQGGAAGQRERVAELVMMAREQ-------GREVQIIAADRRSQMNMKQDERLSGELIT 488 V G G G+ + + +AR+ G +V +A ++ +++ ++ Sbjct: 491 VQGYAG-TGKTTMMRQTAALARDLAPLAKKDGYKVLGLAPTHSARKTLEESGGFDSRTVS 549 Query: 489 GRRQLLEGMAFTP---GSTVIVDQGEKLSLKETLTLLDGAARHN-VQVLITDSGQRTG-- 542 + G P + V++D+ LS + LL+ +++++ ++ G Sbjct: 550 AFLREAGGGTLPPDIKNTIVLIDEASFLSTRNMNALLERLIALKPAKIVLSGDRRQHGAV 609 Query: 543 -TGSALMAMKDAGVNTYRW---------QGGEQRPATI------------------ISEP 574 G + AG+ T +G + A + I E Sbjct: 610 EAGRPFDIAQRAGLPTAIMKDIVRLPKDEGHRDQRAAVEAAAQGKVAVAMKRLGANIVER 669 Query: 575 DRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTAL 634 N+ + A ++++ R + + Q IRSEL G L +T++ L Sbjct: 670 PGNLAGGAVEAWRALPKDKQDKALLVAPSHRLREAINQGIRSELIANGRLSAETMTISVL 729 Query: 635 SPVWLDSRSRYLRDMYRPGMVMEQWNP----ETRSHDRYVIDRVTAQSHSLTLRDAQGET 690 L Y G +++ + + R ++ V + LTLR+A+G+ Sbjct: 730 RSKNLTRAEAMSPRSYAAGDILQFHARLDAINAKKNTRRLVTAVDEERGRLTLRNARGKD 789 Query: 691 QVVRISSL-----DSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAM 745 Q V +S L ++ +SL R E + + G+ + T P +S D +V ++ + Sbjct: 790 QTVPLSRLQGRYENTPYSLHREEPLELRRGDSVMFTRSNPDAGLSAMDAAKVVGWDQERV 849 Query: 746 TVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASV-----TQMAMDNA 800 ++ V G D P L +G+ T + +A +V + Sbjct: 850 SLNVSGTQRQFG---RDDP-ALRSLTHGYAMTSHAAQGRTAKDVVAVMDSKERALTSQVG 905 Query: 801 TLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSL-ETAISHQKSA 859 ++RS + L + E + T E T L + S+ Sbjct: 906 FYVSISRSADTLALIVNDKERVLNTMQRQTGLKTSAMETEGRIGDLTDLGTHQGTGTTSS 965 Query: 860 LHTPAQQA 867 L PA A Sbjct: 966 LSVPALAA 973 Score = 348 bits (892), Expect = 1e-93, Method: Composition-based stats. Identities = 148/668 (22%), Positives = 264/668 (39%), Gaps = 76/668 (11%) Query: 825 EKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSM 884 E LAR + + R E + S A+ A+ L E ++ AFS+ Sbjct: 328 EGLARRMAQNLFRPTKTLRLSEND-PYKLERAASEKGYSARAAVSFGLRHHEEREAAFSL 386 Query: 885 VDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSIL 944 + A AA+G ++ E+ + R + + AK R+ E+++ Sbjct: 387 HHVRRTALEHAADGVTLRDIDREL--RFLRANRKLLVNAKDPNAESTTKRSLTHEERTLS 444 Query: 945 RHILEGK-EAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFR 1003 G+ ++P LT GQ+AA +IL +R VQGYAG GKTT R Sbjct: 445 LLQDAGRTGPLVPEQTLRSALESTHLTGGQKAAIGLILGGPNRLVGVQGYAGTGKTTMMR 504 Query: 1004 AVMSAVNMLP---ESERPRVVGLGPTHRAVGEMRSAG-VDAQTLASFLHDTQLQQRSGET 1059 + L + + +V+GL PTH A + +G D++T+++FL + Sbjct: 505 QTAALARDLAPLAKKDGYKVLGLAPTHSARKTLEESGGFDSRTVSAFLREAGGGTLP--- 561 Query: 1060 PDFSNTLFLLDESSMVGNTDMARAY-ALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTR 1118 PD NT+ L+DE+S + +M LIA + V SGD Q A+ G+PF + Q R Sbjct: 562 PDIKNTIVLIDEASFLSTRNMNALLERLIALKPAKIVLSGDRRQHGAVEAGRPFDIAQ-R 620 Query: 1119 SAADVAIMKEIVRQ-----TPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPE 1173 + AIMK+IVR + R AV + V A+ L Sbjct: 621 AGLPTAIMKDIVRLPKDEGHRDQRAAVEAAAQGKVAVAMKRL------------------ 662 Query: 1174 HSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHL 1233 G + P L V + + +++ L+V Sbjct: 663 ------------------------GANIVERPGNLAGGAVEAWRALPKDKQDKALLVAPS 698 Query: 1234 NEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHR--------D 1285 + R +N I G L E + + VL + N+ E ++ D Sbjct: 699 HRLREAINQGIRSELIANGRLSAETMTISVLRSKNLTRAEAMSPRSYAAGDILQFHARLD 758 Query: 1286 ALVLVDNVYHRIAGISKDDGLITLQDAEGNTRL--ISPREAVAEGV--TLYTPDTIRVGT 1341 A+ N + + ++ G +TL++A G + +S + E +L+ + + + Sbjct: 759 AINAKKNTRRLVTAVDEERGRLTLRNARGKDQTVPLSRLQGRYENTPYSLHREEPLELRR 818 Query: 1342 GDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAIT 1401 GD + FT+S+ + G A V + V+L+ R+ + A + + YA+T Sbjct: 819 GDSVMFTRSNPDAGLSAMDAAKVVGWDQERVSLNVSGTQRQF-GRDDPALRSLTHGYAMT 877 Query: 1402 AHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAV 1461 +H AQG + +A+ ++ + + YV++SR + + ++++ + + Sbjct: 878 SHAAQGRTAKDVVAVMDSK--ERALTSQVGFYVSISRSADTLALIVNDKERVLNTMQRQT 935 Query: 1462 Q-KGTAHD 1468 K +A + Sbjct: 936 GLKTSAME 943 >UniRef50_A8ZLG3 Putative uncharacterized protein n=3 Tax=Acaryochloris marina MBIC11017 RepID=A8ZLG3_ACAM1 Length = 1317 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 171/898 (19%), Positives = 318/898 (35%), Gaps = 111/898 (12%) Query: 1 MMSIAQVRSA-GSAGNYYTDKDNYYVLGS-----MGERWAGRGAEQLGLQGSVDKDVFTR 54 M++I + S YYT +++YY W G A ++FT Sbjct: 1 MLNITTINSNIKDGAKYYTKEESYYSQNKEIQSMTQTEWFGSMAP----DEHYSAELFTE 56 Query: 55 LLEGRLPDGADLSRMQDGSNRHRPGYDLTFSAP-KSVSM-MAMLGGDKRLIDAHNQAVDF 112 + G LP+G + G + R YDLTFS P KS+SM + GDKRL +AH + + Sbjct: 57 MFYGNLPNGGRMRNEVKGKGQERLAYDLTFSVPGKSLSMSIHGPNGDKRLWNAHVETIKE 116 Query: 113 AVRQVEA-LASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVT-QHNG 170 + VE A+ R+ + + V T ++ AL +H +R +P +HTH V+ N T +G Sbjct: 117 VLAIVEERYAAARIQANNDRQVVKTSSIAAALVHHHETRAGDPHVHTHVVLFNGTLCPDG 176 Query: 171 EWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP 230 E++ + + + ++G G LY +K+ +V+ LGYE K G +++ G Sbjct: 177 EYRAMYIEPLIRSGI----------LGDLYDQKMALKVQELGYEIRET-KTG-FDLAGAT 224 Query: 231 ---VEAFSGRSQTIREAVGEDA---SLKSRDVAALDTRKSKQHVDP-EIKMAEWMQTLKE 283 ++ FS RS I + + E + K+R A +TR K + E K W + + Sbjct: 225 DEQIKKFSKRSTEIEDYLKEKGWSNTPKNRQKATFETRIGKDITESLEQKQERWGEEMAS 284 Query: 284 TGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLART 343 GF L + ++ + AI L+E + F D+ Sbjct: 285 VGF------------HGLTPSDQPIKPESQETPRELLDAAIEHLTEHQSSFNAEDIQRFV 332 Query: 344 VGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALS--RDIMK 401 L + + I L L G T+ V + + + +D Sbjct: 333 FSHL--RSFDEKPLNTEIS---KHPDL--LTAWDGRLTTQTAVDRDQRILDIVLFKDSKV 385 Query: 402 QNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGR 461 + +G ++A+ L I+ G G G+ + +AREQ Sbjct: 386 EPLNPTADFSDTMLNSGQAEAMKRLLSFSDQYQILKGLAG-TGKTTALG----LAREQLP 440 Query: 462 ---EVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKET 518 ++++ A ++ + + L G I ++ I D+ + Sbjct: 441 PDVDIKVFAPTHNAKHQISEAFGLKGATIASF--VVSPPPEGANQLWIFDEAGMFGSADM 498 Query: 519 LTLLDGAARHNVQVLITDSGQR---TGTGSALMAMKDAGVNTY------RWQGGEQRPAT 569 +L A + + + G+ + + + GV + R Q EQ A Sbjct: 499 EKILQKAEQVGARCWFVGDTGQNASISAGAPVRMLMNRGVTVHRLDQIIRQQNKEQLRAV 558 Query: 570 --------------------IISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVR-EQA 608 I D + + K + V G E+ Sbjct: 559 ELIADGHGVEALRALEKNGNIREVEDSETKLTSAVAYYMEKPKHRRDKTLVVVGTNAERF 618 Query: 609 ILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPET----- 663 T+ +R+EL +G L T L L + + Y G ++ Sbjct: 619 GFTKLLRAELIKEGQL-TKNTEFTQLQRRNLSKAQKKRAENYNKGDLLVLHKKHRLYTQL 677 Query: 664 RSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGK 723 ++H Y + V + L ++ G + + + + + + +A G++LR T Sbjct: 678 QTHVPYKVLAV--EGKKLKVQSLGGRNFTINPAEHELT-QAYTTRRNQIAVGDKLRFTST 734 Query: 724 IPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVET---PGH 780 + L + + TV L ++ L++++ W T Sbjct: 735 NMKKDIHNNAFLTCTDIKDQIATV-KDKHGRVHHLDLTKP----LQIDHDWATTTYRSQG 789 Query: 781 SVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSE 838 S + AS+ + + G++R+ + D ++ E +A+ + E Sbjct: 790 STNSETLYIASLNPTSARESFYVGISRNKTKYLTVFTEDLSKLQEWVAQSNAQENALE 847 Score = 347 bits (889), Expect = 3e-93, Method: Composition-based stats. Identities = 141/674 (20%), Positives = 254/674 (37%), Gaps = 93/674 (13%) Query: 816 SSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLE---TAISHQKSALHTPAQQ----AI 868 + + + + T EQ + R GE ++ + +Q+ + Sbjct: 250 TPKNRQKATFETRIGKDITESLEQKQERWGEEMASVGFHGLTPSDQPIKPESQETPRELL 309 Query: 869 HLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGT 928 A+ + + +F+ D+ S L EI+ K DLL Sbjct: 310 DAAIEHLTEHQSSFNAEDIQRFVFSH-LRSFDEKPLNTEIS---KHPDLLTA------WD 359 Query: 929 GLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFT 988 G L ++ + + ++ IL +L V PL L SGQ A + +L SD++ Sbjct: 360 GRLTTQTAVDRDQRILDIVLFKDSKVEPLNPTADFS-DTMLNSGQAEAMKRLLSFSDQYQ 418 Query: 989 VVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA-GVDAQTLASFL 1047 +++G AG GKTT LP +V PTH A ++ A G+ T+ASF+ Sbjct: 419 ILKGLAGTGKTTALGLARE---QLPPDVDIKV--FAPTHNAKHQISEAFGLKGATIASFV 473 Query: 1048 HDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIA 1107 P+ +N L++ DE+ M G+ DM + G R GDT Q +I+ Sbjct: 474 VSPP--------PEGANQLWIFDEAGMFGSADMEKILQKAEQVGARCWFVGDTGQNASIS 525 Query: 1108 PGQPFRLQQTRSAADVAIMKEIVRQ-TPELREAVYSLINRDVERALSGLESVKPSQVPRQ 1166 G P R+ R V + +I+RQ E AV + + AL LE Sbjct: 526 AGAPVRMLMNR-GVTVHRLDQIIRQQNKEQLRAVELIADGHGVEALRALEK--------- 575 Query: 1167 EGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQ 1226 ++ E S+ T + V Y + R++ Sbjct: 576 ------NGNIREVEDSE-----------------------TKLTSAVAYYMEKPKHRRDK 606 Query: 1227 TLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTW------ 1280 TL+V N +R ++ K G+L K L N+ + +R + Sbjct: 607 TLVVVGTNAERFGFTKLLRAELIKEGQLTKN-TEFTQLQRRNLSKAQKKRAENYNKGDLL 665 Query: 1281 ---ETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTI 1337 + HR L +V +++ + + +Q G I+P E E YT Sbjct: 666 VLHKKHRLYTQLQTHVPYKVLAVEGKK--LKVQSLGGRNFTINPAE--HELTQAYTTRRN 721 Query: 1338 RVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLA 1397 ++ GD++RFT ++ ++ N+ T T + T+ D + + ID Sbjct: 722 QIAVGDKLRFTSTNMKKDIHNNAFLTCTDIKDQIATVKDKHGRVHHLDLTKPLQ--IDHD 779 Query: 1398 YAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMK-QHVQVYTDNRQGWTDA 1456 +A T + +QG++ + + + + ES YV +SR K +++ V+T++ + Sbjct: 780 WATTTYRSQGSTNSETLYIASL----NPTSARESFYVGISRNKTKYLTVFTEDLSKLQEW 835 Query: 1457 INNAVQKGTAHDVF 1470 + + + A ++ Sbjct: 836 VAQSNAQENALEIL 849 >UniRef50_Q0KJG8 DNA helicase n=3 Tax=Sphingomonadaceae RepID=Q0KJG8_9SPHN Length = 1014 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 227/970 (23%), Positives = 362/970 (37%), Gaps = 150/970 (15%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMG--ERWAGRGAEQLGLQGSVDKDVFTRLLEG 58 M SIA VRS+G A +Y+ + DNYY WAG GA LGL+G+V +D F +L G Sbjct: 1 MHSIAAVRSSGGAADYFAN-DNYYTAQESAQAGVWAGEGARALGLEGTVGRDAFEAILNG 59 Query: 59 RLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQV- 117 LPDG + +++ R G DLTFS PKS S++A++ GD+R++DAH AV + Q+ Sbjct: 60 HLPDGDKVGQVEG----RRLGLDLTFSMPKSASILALVSGDRRILDAHMAAVRSTMSQLV 115 Query: 118 -EALASTRVMTDGQS-ETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH-NGEWKT 174 + LA R +S E TGNLV ALF HDTSR +PQ H HAVVAN+T+ G WK Sbjct: 116 EKQLAEGRNYERSRSGEPEKTGNLVYALFAHDTSRALDPQGHIHAVVANLTRDLKGNWKA 175 Query: 175 LSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP---V 231 L + ++ K N G+ Y + Q++ LGYETE GKHG +E+ GVP + Sbjct: 176 LWNGEIWK---------NNTTIGQFYHAAFRAQLQKLGYETEASGKHGAFEIKGVPTAVI 226 Query: 232 EAFSGRSQTIREAVGEDASLK--SRDVAALDTRKSKQHV-DPEIKMAEWMQTLKETGFDI 288 +AFS R+ I + E + + ++ L TR K V D W E GFD Sbjct: 227 KAFSTRANEIEAKIAETGATRLATKKQITLYTRDPKLAVEDRAALAEGWKTRAAELGFDG 286 Query: 289 RAYRDAADQRA--DLRTLTPGPASQDGPDVQQAVT------------------------- 321 + A RA +R ASQ +V + ++ Sbjct: 287 KPLIAEAMARAAHQVRPTLRETASQAFAEVAERISAAMRPPSALAVSGPAALFLSAETIK 346 Query: 322 ------QAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIP--- 372 AI LSER+ F+ +L+ +G + I E + LIP Sbjct: 347 AQHATASAIRHLSEREAAFSPQAILSAALG-FQIKGLEGGAVALRIGELVREGHLIPGKS 405 Query: 373 --LDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPR--------------- 415 LD L T+ + E + + RV + PE ++ R Sbjct: 406 DRLDGHYDLVTTPAALGREQQILDRIDAGAGKGRVFMAPEVAMVRLQAAARELGIERAGS 465 Query: 416 -----TAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADR 470 AG A + + + G G AG+ + L + +G ++ +A Sbjct: 466 DGWQLNAGQLAAGVAVLSGKDRFLNIQGVAG-AGKSTLLGALDKVLSAEGVKLVGLAFQN 524 Query: 471 RSQMNMK------------QDERLSGELITGRRQLLEGMAFT-------------PGSTV 505 + +++ ++ + I G A + + Sbjct: 525 KMVADLRGGGSGMMTAEQMREAGIEAWTIASFVNRYAGPAAQGQGERFETARTALQNTVI 584 Query: 506 IVDQGEKLSLKETLTLLDGAARHN-VQVLITDSGQRTGT---GSALMAMKDAGVNTYRW- 560 I D+ +S ++ +L A R + + Q+ G + AG T R Sbjct: 585 ITDESSMVSSRDMASLTMIAERLDLAKAPFIGDRQQLSAIEQGKMFAVSQAAGQATVRMD 644 Query: 561 QGGEQRPATIIS------------------------EPDRNVRYARLAGDFAASVKAGEE 596 + Q+ + ++ D+ A A + + Sbjct: 645 ENIRQKGSPLLLAVAGLSNEGHAGLALDLLAAHGRVIEDKADHIAAAADLWLSLAPEERA 704 Query: 597 SVAQ-VSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMV 655 A +G ++ + ++ L +G L P V + L YRPG V Sbjct: 705 RTAIFTAGRDDRTRINGLVQQGLLKEGSLAGPGVPFSTLQSANATREEMRFASTYRPGQV 764 Query: 656 MEQWNPETR-SHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWS-----LFRPEK 709 +E R D V + G+ +V+ +D L+ + Sbjct: 765 LEARMDVRELGLRRGEYDVVAIGRDGKVTLERDGKRKVIDPDRIDPQHRFDRIGLYDRKD 824 Query: 710 MPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALK 769 + + GE + K ++ +V S + A+T+ + + + TLP SD L Sbjct: 825 ITLHGGETVFWREKDGPRDIAKSTYAKVVSATGQAVTLELADKRQ-ITLPSSDPMLRRLD 883 Query: 770 LENGWVETPGH--SVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKL 827 L + + + V +S + T N L D + D +L Sbjct: 884 LGYALNAHMAQGMTQAQAIEVISSRQRNLATQRTQNVLNTRATDDMRVVTNDLEALKFQL 943 Query: 828 ARHPSFTVVS 837 R P + Sbjct: 944 DRTPGNKTSA 953 Score = 328 bits (841), Expect = 9e-88, Method: Composition-based stats. Identities = 160/734 (21%), Positives = 275/734 (37%), Gaps = 106/734 (14%) Query: 848 SLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGE 907 ++ + SA AQ A A+ + ++ AFS +L+ A F +G + Sbjct: 331 AVSGPAALFLSAETIKAQHATASAIRHLSEREAAFSPQAILSAALGFQIKGLEGGAVALR 390 Query: 908 INAQIKRGDLLY-VDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLME------R 960 I ++ G L+ L+ + A+ E+ IL I G M R Sbjct: 391 IGELVREGHLIPGKSDRLDGHYDLVTTPAALGREQQILDRIDAGAGKGRVFMAPEVAMVR 450 Query: 961 VPGELME-----------KLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAV 1009 + E +L +GQ AA +L DRF +QG AG GK+T A+ Sbjct: 451 LQAAARELGIERAGSDGWQLNAGQLAAGVAVLSGKDRFLNIQGVAGAGKSTLLG----AL 506 Query: 1010 NMLPESERPRVVGLGPTHRA-------------VGEMRSAGVDAQTLASFLHDTQLQQRS 1056 + + +E ++VGL ++ +MR AG++A T+ASF++ Sbjct: 507 DKVLSAEGVKLVGLAFQNKMVADLRGGGSGMMTAEQMREAGIEAWTIASFVNRYAGPAAQ 566 Query: 1057 GETPDF-------SNTLFLLDESSMVGNTDMARAYALIAAGG-GRAVASGDTDQLQAIAP 1108 G+ F NT+ + DESSMV + DMA + +A GD QL AI Sbjct: 567 GQGERFETARTALQNTVIITDESSMVSSRDMASLTMIAERLDLAKAPFIGDRQQLSAIEQ 626 Query: 1109 GQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEG 1168 G+ F + Q A V + + I ++ L AV L N Sbjct: 627 GKMFAVSQAAGQATVRMDENIRQKGSPLLLAVAGLSN----------------------- 663 Query: 1169 AWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTL 1228 A + + A + PE R +T Sbjct: 664 ----------------EGHAGLALDLLAAHGRVIEDKADHIAAAADLWLSLAPEERARTA 707 Query: 1229 IVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRD--- 1285 I T +DR +N ++ K G L V L +AN E+R ST+ + Sbjct: 708 IFTAGRDDRTRINGLVQQGLLKEGSLAGPGVPFSTLQSANATREEMRFASTYRPGQVLEA 767 Query: 1286 -----ALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPRE----AVAEGVTLYTPDT 1336 L L Y + I + DG +TL+ +G ++I P + + LY Sbjct: 768 RMDVRELGLRRGEYD-VVAIGR-DGKVTLER-DGKRKVIDPDRIDPQHRFDRIGLYDRKD 824 Query: 1337 IRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDL 1396 I + G+ + + + D R ++ V + +G +VTL + + P + + +DL Sbjct: 825 ITLHGGETVFWREKDGPRDIAKSTYAKVVSATGQAVTLELADKRQITLPSSDPMLRRLDL 884 Query: 1397 AYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDA 1456 YA+ AH AQG ++ AI + ++ +A + V +R ++V T++ + Sbjct: 885 GYALNAHMAQGMTQAQAIEVIS--SRQRNLATQRTQNVLNTRATDDMRVVTNDLEALKFQ 942 Query: 1457 INN-AVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPARF 1515 ++ K +A + + + + A + R+L ++ + + A G A Sbjct: 943 LDRTPGNKTSALETV-GRLEVDARPANPI--EPRQLPELRMSPELKAKLDAALGPVAA-- 997 Query: 1516 IAPGRKYPQPYVAL 1529 R+ P P +L Sbjct: 998 -PAVRQLPVPEKSL 1010 >UniRef50_D0SGZ5 TrwC protein n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SGZ5_ACIJO Length = 1076 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 142/714 (19%), Positives = 277/714 (38%), Gaps = 105/714 (14%) Query: 821 TRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKL 880 + ++ + ++++++ + E AI ++A+ A+ + + Sbjct: 425 KKDDQQSVPGNTNAALNQKVQDVEELSDRERAI-----------REAVFYAVGHHTERDM 473 Query: 881 AFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAE 940 + ++ A + + ++ E++ +K G L+ D TG L ++ +E Sbjct: 474 LVTRSNIEATALNKSKAMFKIDDVNNELDRLLKNGILVQSD------TGKLTTKRLAHSE 527 Query: 941 KSILRHILEGKEAVMPLM--ERVPGELMEK-------LTSGQRAATRMILETSDRFTVVQ 991 + H+ E + +V ++ E++ +L E+ T GQR + I T R+ V Sbjct: 528 IWSIDHVREERHSVDKILTEEQIKDDLKEREQFNKFDYTEGQRNSIYSIFTTDSRYHAVD 587 Query: 992 GYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRS-AGVDAQTLASFLHDT 1050 G AG GKTT SA+N + + V G+ T A + G+ + T A F ++ Sbjct: 588 GLAGTGKTTML----SALNKIADKNGFIVKGMAGTGVAAKTLEEETGIPSTTTAMFKYNE 643 Query: 1051 QLQQ----RSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAI 1106 Q +SG D N ++++DESS G L + R V GD +QLQ+I Sbjct: 644 SKLQNNLNQSGNNFDRKNEIWIVDESSFAGQESFVDVLKLAKSADARVVFLGDKNQLQSI 703 Query: 1107 APGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQ 1166 G+PF L Q + M+ I RQ + + V SLI A + + S+ + Sbjct: 704 EAGKPFELLQKE--MSFSSMQNINRQKTQELKDVVSLI-----TAKNAKGEITLSENAKA 756 Query: 1167 EGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQ 1226 + SV E+ + L+E +V+ Y E R + Sbjct: 757 FDLLDKQGSVKEYDQ------------------------LDLHEEVVKSYMSNDLEKRNK 792 Query: 1227 TLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHR-- 1284 T+I+T N DR++LN ++ + GEL E+ N+ + + + Sbjct: 793 TMIITPFNSDRKILNDLVRQAKIDKGELQGEEHAFTTYANKNLTRAQQGEILEYSKGDVL 852 Query: 1285 --------DALVLVDNVYHRIAGISKDDG-----LITLQDAEGNTRLISPREAVAEGVTL 1331 + + + Y+ + K +G + LQD +G + + + + + Sbjct: 853 RFNKTYSPEGVSFKKDEYYTVIETYKQNGGKKEEGLVLQDKDGLQQKWNSKN--KNQIEV 910 Query: 1332 YTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAE 1391 Y + + GD ++ +S+ E + +T + G+ + L D + + P E Sbjct: 911 YEKEQKELRKGDLIKINRSNGE--FKNGEKYTFKEIQGNEIVLIDDKNQEKRMPKDE--F 966 Query: 1392 QHIDLAYAITAHGAQGASETFAIALEG------------TEGNRKLMAGFESAYVALSRM 1439 H D YA T + +QG ++T + L N + G + YV +R Sbjct: 967 NHWDHGYANTIYSSQGLTKTNVLMLINSNKLSNTQNSEQAIKNLGKIFGNRAFYVGATRA 1026 Query: 1440 KQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRD 1493 ++++T ++ A+ K + + ++ N E+ F + L Sbjct: 1027 SHDLKIFTHDKNVARGAVGYEQDKSSY------AQETQLGNNEKQFDQGKGLDI 1074 Score = 263 bits (672), Expect = 4e-68, Method: Composition-based stats. Identities = 116/320 (36%), Positives = 162/320 (50%), Gaps = 32/320 (10%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGE-----RWAGRGAEQLGLQGS-VDKDVFTR 54 MMS+ ++S+ A YY+ KDNYY E W G+GAE LGL D D F Sbjct: 1 MMSMTTLKSSSQASTYYS-KDNYYTKEPTAESLEKAEWYGKGAEVLGLVDQDFDPDKFKE 59 Query: 55 LLEGRLPDGADLSRMQDGSN----RHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAV 110 LLEG + + + R+ +HRPG DLTFSAPKSVS+++ + D + +AH AV Sbjct: 60 LLEGTIDEDNKIGRVTYEDGVAVTQHRPGVDLTFSAPKSVSIISEVFKDDDVRNAHEDAV 119 Query: 111 DFAVRQVEA-LASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHN 169 + VE A TR+ DG + V T NLV ALF+H+ SRD +PQ HTHAVV N T ++ Sbjct: 120 KATLDFVEKKYAQTRISVDGSMQKVDTENLVAALFSHNNSRDLDPQTHTHAVVMNATLNS 179 Query: 170 -GEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPG 228 GEW +S+ E +Y NQ G +Y +L ++ LGY+ + +G +E+ G Sbjct: 180 KGEWSAMSN---------EQIYQNQKLIGAIYNSELAVNLKDLGYDLDFKA-NGNFEISG 229 Query: 229 VP---VEAFSGRSQTIREAVGED------ASLKSRDVAALDTRKSKQHVDPEIKMAEWMQ 279 + ++ FS R + + E E AS R+V ALDTR K+ V E +W + Sbjct: 230 ISQDVIDEFSQRRKAMLENAEERGVDLSTASASVREVIALDTRTRKKDVTQESLDNDWSE 289 Query: 280 TLKETGFDIRAYRDAADQRA 299 G D R Sbjct: 290 RAASFGLTKEYIETLVDPRQ 309 Score = 178 bits (450), Expect = 2e-42, Method: Composition-based stats. Identities = 74/629 (11%), Positives = 180/629 (28%), Gaps = 103/629 (16%) Query: 287 DIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGI 346 D ++ + + + S +++AV A+ +ER + T +++ A + Sbjct: 428 DQQSVPGNTNAALNQKVQDVEELSDRERAIREAVFYAVGHHTERDMLVTRSNIEATALNK 487 Query: 347 LPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVT 406 I+ +D + L+ D G T+ E+ R+ Sbjct: 488 SKAM-FKIDDVNNELDRLLKNGILVQSD--TGKLTTKRLAHSEIWSIDHVREERHSVDKI 544 Query: 407 VHPE------------KSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVM 454 + E T G +++ + V G G G+ ++ L Sbjct: 545 LTEEQIKDDLKEREQFNKFDYTEGQRNSIYSIFTTDSRYHAVDGLAG-TGKTTMLSALNK 603 Query: 455 MAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAF----------TPGST 504 +A + G V+ +A + ++++ + + + Sbjct: 604 IADKNGFIVKGMAGTGVAAKTLEEETGIPSTTTAMFKYNESKLQNNLNQSGNNFDRKNEI 663 Query: 505 VIVDQGEKLSLKETLTLLDGAARHNVQVLITDSG---QRTGTGSALMAMKD----AGVNT 557 IVD+ + + +L A + +V+ Q G ++ + + Sbjct: 664 WIVDESSFAGQESFVDVLKLAKSADARVVFLGDKNQLQSIEAGKPFELLQKEMSFSSMQN 723 Query: 558 YRWQGGEQRPATI-----------------------------ISEPDRNVRYARLAGDFA 588 Q ++ + + E D+ + + + Sbjct: 724 INRQKTQELKDVVSLITAKNAKGEITLSENAKAFDLLDKQGSVKEYDQLDLHEEVVKSYM 783 Query: 589 ASVKAGEESVAQVSG-VREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLR 647 ++ ++ ++ IL +R +G L E T + L + Sbjct: 784 SNDLEKRNKTMIITPFNSDRKILNDLVRQAKIDKGELQGEEHAFTTYANKNLTRAQQGEI 843 Query: 648 DMYRPGMVMEQWNP------ETRSHDRYVIDRVTAQS-----HSLTLRDAQGETQVVRIS 696 Y G V+ + + Y + Q+ L L+D G Q S Sbjct: 844 LEYSKGDVLRFNKTYSPEGVSFKKDEYYTVIETYKQNGGKKEEGLVLQDKDGLQQKWN-S 902 Query: 697 SLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPA 756 + ++ E+ + G+ +++ G++ + + + ++ E Sbjct: 903 KNKNQIEVYEKEQKELRKGDLIKINRSNGE--FKNGEKYTFKEIQGNEIVLIDDKNQE-- 958 Query: 757 TLPVSDSPFTALKLENGWVETPGHSV-SDSATVFASVTQMAMDN---------------- 799 + F ++G+ T S V + + N Sbjct: 959 -KRMPKDEFNHW--DHGYANTIYSSQGLTKTNVLMLINSNKLSNTQNSEQAIKNLGKIFG 1015 Query: 800 --ATLNGLARSGRDVRLYSSLDETRTAEK 826 A G R+ D+++++ + A Sbjct: 1016 NRAFYVGATRASHDLKIFT--HDKNVARG 1042 >UniRef50_B2TH74 Conjugative relaxase domain protein n=1 Tax=Burkholderia phytofirmans PsJN RepID=B2TH74_BURPP Length = 1486 Score = 378 bits (971), Expect = e-102, Method: Composition-based stats. Identities = 152/618 (24%), Positives = 243/618 (39%), Gaps = 89/618 (14%) Query: 896 AEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVM 955 EG + I+ G L+ + +R + E IL G+ V Sbjct: 907 VEGYSPERAQRTVEESIRNGRLVETE-------QRFTTREMRQTESEILWMERTGRGTVE 959 Query: 956 PLMERVPGELM---EKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVN-- 1010 PL E M L GQ+ A +++L + +RF +QGYAGVGK+ V+ + Sbjct: 960 PLRTAEQAEAMLASTGLNPGQKEAAQLVLTSPNRFIGIQGYAGVGKSHLMSTVVQEIKME 1019 Query: 1011 --MLPESERPRVVGLGPTHRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFL 1068 E+ +VVGL P ++ G+++QTLASFL + G T+ Sbjct: 1020 AAQQAETLGYKVVGLAPYGSQNKALQELGMESQTLASFLVREPDPELLG-----PKTIIF 1074 Query: 1069 LDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKE 1128 LDE+S+V M A + G R V GD Q QA+ G+PF Q +A + E Sbjct: 1075 LDEASVVSAHQMKDLMARVEQSGARLVMIGDRKQTQAVEAGKPFEQLQD-GGMALAHVTE 1133 Query: 1129 IVRQTP-ELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKL 1187 I RQ L+ AV N ++ ++ LE Sbjct: 1134 IQRQKDATLKAAVEKAANNNIGGSVKLLE------------------------------- 1162 Query: 1188 AEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDV 1247 K + + DY E R+ TLIV NE RR +N ++ D Sbjct: 1163 ---------KNTVQLKKEKARHGRLADDYVKMPEEQRDGTLIVVGTNETRRKINELVRDK 1213 Query: 1248 RE-KAGELGKEQVMVPVLNTANIRDGELRRLSTWETH-------RDALVLVDNVYHRIAG 1299 + GEL V L + ++ E ++ S+++ L V++ + Sbjct: 1214 LKLPEGEL------VRALESYDMSRAEHKQASSYQQGVVLIAERPGEHGLDRGVHYTVRS 1267 Query: 1300 ISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVAN 1359 +T+ DA GN R + GV+ YT I + GD +R T++D +G Sbjct: 1268 ADARGNTLTVSDAAGNVRSLDATHLS--GVSTYTLTDIPIVKGDWLRITRNDNRQGVFNG 1325 Query: 1360 SVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGT 1419 V +V DSV L +G + + H YA T H AQG + + T Sbjct: 1326 ERHRVLSVDKDSVVLENGAKL------SRASAIHAQHGYAQTVHSAQGLTRHGVLIEADT 1379 Query: 1420 EGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVM 1479 R L + YVA+SR + +++YTD+ G + +K A ++ + + ++ + Sbjct: 1380 ---RSLTSNRAVWYVAISRAQHALKIYTDDAGGLARVMAREPKKYAALELRDERREKVIF 1436 Query: 1480 NAERLFSTARELRDVAAG 1497 +A S +R L+ + G Sbjct: 1437 DA---LSASRTLQQQSRG 1451 Score = 263 bits (672), Expect = 5e-68, Method: Composition-based stats. Identities = 110/319 (34%), Positives = 158/319 (49%), Gaps = 27/319 (8%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRL 60 M++ V S+ A NYY + D+YY W G GA+ LGL+G VD+ +F LL+GRL Sbjct: 1 MLTFDFVGSSAEAANYYEETDDYYTKPGHRGEWDGEGAKALGLEGGVDRQIFMDLLDGRL 60 Query: 61 PDGADLSR------MQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAV 114 PDG + + R G D TF+APKSVS++A++ D+R+I+AH+ AV A+ Sbjct: 61 PDGRQARKSMPHTQKDGSKSAPRLGIDFTFNAPKSVSIVALVKNDRRVIEAHDAAVKDAL 120 Query: 115 RQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ-HNGEWK 173 +E+ A R G S TG L++A F HD SRDQ+P LHTHAV N+TQ +G W Sbjct: 121 AMMESRAIARQKYRGISFREKTGKLIVAKFQHDLSRDQDPHLHTHAVTMNLTQRRDGRWV 180 Query: 174 TLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVEA 233 L+++ + K+ G YR +L + + +GY+ +EM VP EA Sbjct: 181 ALANEDMLKSV---------KVVGAYYRAQLAQYLTNMGYDIRAT--RNGFEMASVPDEA 229 Query: 234 ---FSGRSQTIREAVG------EDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKET 284 FS RS+TI E + E A+ + + DTR K + EW L Sbjct: 230 IKLFSQRSRTIEEELAKSGLTRETATGELKQNITKDTRAEKTDANRAALRQEWANALAAA 289 Query: 285 GFDIRAYRDAADQRADLRT 303 G D+ + T Sbjct: 290 GIDLGPMMADHEAAPVPDT 308 Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats. Identities = 100/651 (15%), Positives = 217/651 (33%), Gaps = 79/651 (12%) Query: 278 MQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQ--AIAGLSERKVQFT 335 ++ G + A+ D R + P Q + V Q + + Sbjct: 832 RAYMRSLGATEEVNDELANAVEDGRLVAELPLFQSAKSFSRDVHQQTIDPHFDKFRHDND 891 Query: 336 YTDV--LARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVR 393 + + ++ E ERA+ ++E+I +L+ + FT+ E + Sbjct: 892 IHKLTKESWVSLLVNVEGYSPERAQRTVEESIRNGRLV---ETEQRFTTREMRQTESEIL 948 Query: 394 ALSRDIMKQNRVTVHPEKSVP------RTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRE 447 + R E++ G +A ++ + G G G+ Sbjct: 949 WMERTGRGTVEPLRTAEQAEAMLASTGLNPGQKEAAQLVLTSPNRFIGIQGYAG-VGKSH 1007 Query: 448 RVAELVMM--------AREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAF 499 ++ +V A G +V +A + Q+ + + + Sbjct: 1008 LMSTVVQEIKMEAAQQAETLGYKVVGLAPYGSQNKAL-QELGMESQTLASFLVREPDPEL 1066 Query: 500 T-PGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSG---QRTGTGSALMAMKDAGV 555 P + + +D+ +S + L+ + ++++ Q G ++D G+ Sbjct: 1067 LGPKTIIFLDEASVVSAHQMKDLMARVEQSGARLVMIGDRKQTQAVEAGKPFEQLQDGGM 1126 Query: 556 NTYRWQGGEQRPAT------------------------IISEPDRNVRYARLAGDFAASV 591 +++ + R+ RLA D+ Sbjct: 1127 ALAHVTEIQRQKDATLKAAVEKAANNNIGGSVKLLEKNTVQLKKEKARHGRLADDYVKMP 1186 Query: 592 KAGEESVAQVSGVRE-QAILTQAIRSELK-TQGVLGLPEVTMTALSPVWLDSRSRYLRDM 649 + + V G E + + + +R +LK +G L + AL + Sbjct: 1187 EEQRDGTLIVVGTNETRRKINELVRDKLKLPEGEL------VRALESYDMSRAEHKQASS 1240 Query: 650 YRPGMVMEQWNPETRSHDR---YVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFR 706 Y+ G+V+ P DR Y + A+ ++LT+ DA G + + + L S S + Sbjct: 1241 YQQGVVLIAERPGEHGLDRGVHYTVRSADARGNTLTVSDAAGNVRSLDATHL-SGVSTYT 1299 Query: 707 PEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFT 766 +P+ G+ LR+T V G+R +V SV +D++ + + A + Sbjct: 1300 LTDIPIVKGDWLRITRNDNRQGVFNGERHRVLSVDKDSVVLENGAKLSRA---------S 1350 Query: 767 ALKLENGWVET--PGHSVSDSATVFASVTQMAMDN--ATLNGLARSGRDVRLYSSLDETR 822 A+ ++G+ +T ++ + + T+ N ++R+ +++Y+ D Sbjct: 1351 AIHAQHGYAQTVHSAQGLTRHGVLIEADTRSLTSNRAVWYVAISRAQHALKIYTD-DAGG 1409 Query: 823 TAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALP 873 A +AR P E R + + L ++ A+ L Sbjct: 1410 LARVMAREPKKYAALELRDERREKVIFDAL--SASRTLQQQSRGAVKKTLH 1458 >UniRef50_Q1N8W9 TrwC protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N8W9_9SPHN Length = 1075 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 202/985 (20%), Positives = 345/985 (35%), Gaps = 143/985 (14%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVL--GSMGERWAGRGAEQLGLQGSVDKDVFTRLLEG 58 M++++ +RS+ A +Y+ DNYY S+ +W G GAE+LGL+G V D + +G Sbjct: 1 MLTVSAIRSSSGASSYFA-ADNYYSQPDTSISNQWHGAGAERLGLEGEVAPDALEAIFDG 59 Query: 59 RLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVE 118 P D ++ R G DLTF+APK VS++A+ GGD RL+ A AV + +E Sbjct: 60 INPGTGDRITPENTV---RKGVDLTFNAPKGVSLLALEGGDARLLKAQETAVMRTMAYIE 116 Query: 119 AL-ASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ-HNGEWKTLS 176 A RVM DG + V T NL A F HDT+R+QE LHTH +AN+TQ +G WK L Sbjct: 117 KYFAQARVMKDGVRQVVNTKNLTYAAFTHDTNRNQEEHLHTHVTIANMTQMPDGSWKALH 176 Query: 177 SDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPV---EA 233 +D + K N FG Y +L + V LGY+T G + +++ G+P E Sbjct: 177 NDAIWK---------NNTLFGSRYNAELNQLVRDLGYQTHATGNYAQFDITGIPQNITEL 227 Query: 234 FSGRSQTIREAVGEDASLKS--RDVAALDTRKSKQHV-DPEIKMAEWMQTLKETGFDIRA 290 S R+ I E R + LDTR K+ + D + + GFD+RA Sbjct: 228 NSTRAGEIMARSAELGIKDRAGRGIVILDTRNPKEPISDRGAWLQAAYEKNLAAGFDVRA 287 Query: 291 YRDAADQRADLRTLTPG--------------------------------PASQDGPDVQQ 318 + ++A + + R+ + + Sbjct: 288 FAESAREASQERSTILDRVVDMAHRLGERLGPNVDLSDPRMSHSISDRLFMPIEKLRTEW 347 Query: 319 AVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDRE-- 376 AV AI LSER+ FT +DV+ +G P ER + E ++ ++ +R+ Sbjct: 348 AVASAINKLSEREAVFTQSDVIKTALGFREP-GVTPERVDQRLAELHEQKLVLHNERDDP 406 Query: 377 ---KGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPR-----------------T 416 T+ +L E V A + ++ P ++ R Sbjct: 407 NHPSTQITTPESLLREQQVIAGFMRGRGEGEASLSPAEAQERLLDRQAQQAGVAGGIVLN 466 Query: 417 AGYSDAVSVLAQDRPSLAIVSGQGGAAGQR--ERVAELVMMAREQ----GREVQIIAADR 470 AG A V G G + V+E+ M + V +A+ Sbjct: 467 AGQMVAARHALSSPDRFVAVQGDAGTGKSTMVQAVSEVQQMVAASLPDTNKTVVGLASYN 526 Query: 471 RSQMNMKQDERLSGELITGRRQL-------------LEGMAFTPGSTVIVDQGEKLSLKE 517 ++ + ++ I E IVD+ + + Sbjct: 527 AMVKDLGESAKIESHTIQSFLHAYENIARYGSEDRQAEARVELADKIFIVDESSVVGTRA 586 Query: 518 TLTLLDGAARHNV-QVLITDSGQRTGT---GSALMAMKDAGVNTYR-----WQGGEQRPA 568 L+ A + + +++ + G +D+ ++T R Q G Sbjct: 587 MHGLVTIAEKLGIEKMVFMGDRYQLAAIAQGKLFAVGQDSALDTRRMSENIRQAGNPALV 646 Query: 569 TIISE-----------------PDRNVRYARLAGDFAASVKAGEESV-AQVSGVREQAIL 610 + + + AR + + A V G + + Sbjct: 647 EVAALAREGEFSQAFDLLGANFREDKDFVARGVEHYLSMPAADRLQTMLIVPGRALKDEV 706 Query: 611 TQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSH---D 667 + L+ +G L PE ++ L + YR GMV E + Sbjct: 707 NITAQQLLRAEGALTGPERQVSVLEQISKTREDLRYTSSYREGMVFENARDNAGTGLPAG 766 Query: 668 RYVIDRVTAQSHSLTLRDAQGETQVVRISSLDS-----SWSLFRPEKMPVADGERLRVTG 722 Y + V+ +L R + G + + L+ +++ + +GE++R T Sbjct: 767 SYDVADVSKTEVTLVDR-SDGTIHTINPRGFSTNDDRFQAGLYIAKEISIHEGEKIRWTN 825 Query: 723 KIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPV---SDSPFTALKLENGWVETPG 779 + + + D MTV + D L Sbjct: 826 NDHKEGLFRSTEATITKLDGDVMTVNHKVDGVDVEKSIDLTQDKMGEYFDLAYAINADQA 885 Query: 780 HSVSDSATV---FASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVV 836 + + + A + +A + R ++ +Y+ + A P T Sbjct: 886 QGATATNVIALMTAEIRALASRANAYVMMTREKDNLWIYTDDRDRLEKTLEASQPEKTSS 945 Query: 837 SEQIK----TRAGETSLETAISHQK 857 E + R L ++ K Sbjct: 946 VELMNGGPLDRTAAEELRQSLDDAK 970 Score = 316 bits (808), Expect = 7e-84, Method: Composition-based stats. Identities = 157/741 (21%), Positives = 277/741 (37%), Gaps = 101/741 (13%) Query: 808 SGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGET-SLETA--ISHQKSALHTPA 864 +G DVR ++ + E+ ++ ++ R G L L P Sbjct: 281 AGFDVRAFAESAREASQERSTILDRVVDMAHRLGERLGPNVDLSDPRMSHSISDRLFMPI 340 Query: 865 QQ-----AIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQI-KRGDLL 918 ++ A+ A+ + ++ F+ D++ A F G + + ++ L Sbjct: 341 EKLRTEWAVASAINKLSEREAVFTQSDVIKTALGFREPGVTPERVDQRLAELHEQKLVLH 400 Query: 919 YVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELM------------ 966 + + + + S E+ ++ + G+ + + Sbjct: 401 NERDDPNHPSTQITTPESLLREQQVIAGFMRGRGEGEASLSPAEAQERLLDRQAQQAGVA 460 Query: 967 --EKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPES---ERPRVV 1021 L +GQ A R L + DRF VQG AG GK+T +AV M+ S VV Sbjct: 461 GGIVLNAGQMVAARHALSSPDRFVAVQGDAGTGKSTMVQAVSEVQQMVAASLPDTNKTVV 520 Query: 1022 GLGPTHRAVGEM-RSAGVDAQTLASFLHDTQLQQRSGETP-------DFSNTLFLLDESS 1073 GL + V ++ SA +++ T+ SFLH + R G + ++ +F++DESS Sbjct: 521 GLASYNAMVKDLGESAKIESHTIQSFLHAYENIARYGSEDRQAEARVELADKIFIVDESS 580 Query: 1074 MVGNTDMARAYALIAAGGG-RAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQ 1132 +VG M + G + V GD QL AIA G+ F + Q A D M E +RQ Sbjct: 581 VVGTRAMHGLVTIAEKLGIEKMVFMGDRYQLAAIAQGKLFAVGQDS-ALDTRRMSENIRQ 639 Query: 1133 --TPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEA 1190 P L E + +A L + Sbjct: 640 AGNPALVEVAALAREGEFSQAFDLLGANFRED---------------------------- 671 Query: 1191 QQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREK 1250 V Y R QT+++ + +N + Sbjct: 672 ---------------KDFVARGVEHYLSMPAADRLQTMLIVPGRALKDEVNITAQQLLRA 716 Query: 1251 AGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNV-------YHRIAGISKD 1303 G L + V VL + +LR S++ DN + +A +SK Sbjct: 717 EGALTGPERQVSVLEQISKTREDLRYTSSYREGMVFENARDNAGTGLPAGSYDVADVSKT 776 Query: 1304 DGLITLQDAEGNTRLISPREAVAEG----VTLYTPDTIRVGTGDRMRFTKSDRERGYVAN 1359 + + + ++G I+PR LY I + G+++R+T +D + G + Sbjct: 777 EVTLVDR-SDGTIHTINPRGFSTNDDRFQAGLYIAKEISIHEGEKIRWTNNDHKEGLFRS 835 Query: 1360 SVWTVTAVSGDSVTLSDG----QQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIA 1415 + T+T + GD +T++ + I Q++ ++ DLAYAI A AQGA+ T IA Sbjct: 836 TEATITKLDGDVMTVNHKVDGVDVEKSIDLTQDKMGEYFDLAYAINADQAQGATATNVIA 895 Query: 1416 LEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQ-KGTAHDVFEPKP 1474 L E + +A +AYV ++R K ++ +YTD+R + + K ++ ++ P Sbjct: 896 LMTAE--IRALASRANAYVMMTREKDNLWIYTDDRDRLEKTLEASQPEKTSSVELMNGGP 953 Query: 1475 -DREVMNAERLFSTARELRDV 1494 DR R +L ++ Sbjct: 954 LDRTAAEELRQSLDDAKLEEI 974 >UniRef50_D0KZB2 Conjugative relaxase domain protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KZB2_HALNC Length = 943 Score = 374 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 177/929 (19%), Positives = 322/929 (34%), Gaps = 122/929 (13%) Query: 1 MMSIAQVRS--------AGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVF 52 M+ I ++ A + N+ K YY W G A LGL GSV Sbjct: 1 MLRIKNLKGDPSAIIDYAENKKNHPDQKSGYYDAKGAPSAWGGALAADLGLSGSVQAADL 60 Query: 53 TRLLEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDF 112 +LL G L DG R R G D++FSAPKSVS+ A++GGD+R+I AH+ AV Sbjct: 61 KKLLSGELSDGT---RFAKEDPDRRLGIDMSFSAPKSVSLAALVGGDERIIQAHDAAVRT 117 Query: 113 AVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRD----QEPQLHTHAVVANVTQH 168 A+ +E +T V +G LV A + H+ +R +PQLHTH +V+N+T Sbjct: 118 AMSMIEQEYATARFGHAGRNVVCSGKLVYAAYRHEDARTVDDIADPQLHTHCIVSNITID 177 Query: 169 NGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKH-GMWEMP 227 K S D I G +YR +L +++ +GYE + + ++ Sbjct: 178 PETGKPRSIDFAWGQDGI-------KLAGAMYRAELARRLKEMGYELRKSEEGFELAQIS 230 Query: 228 GVPVEAFSGRSQTIREAVG------EDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTL 281 VE FS R + +A+ E AS + + L TR+ K + E + EW Q Sbjct: 231 DEQVETFSRRRVQVDQALEQQGTDREHASSELKTAVTLATRQGKAQLSAEDQYEEWQQRA 290 Query: 282 KETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLA 341 E D+ Q R P + LSER V Sbjct: 291 AEAELDLS-------QPVGPRVSVTPPEID--------LDHTFEHLSERASVINKDAVRL 335 Query: 342 RTVGILPPENGVIERARAGIDEAISREQLIPL-DREKGLFTSGIHVLDELSVRALSRDIM 400 + E + I A + + D K + + E + L++ Sbjct: 336 DALINHMSEGATLSTVDKAIQGAAVTGDVFEIEDGIKRKIITRETLKREQQILLLAQQGR 395 Query: 401 KQNRVTVHPEKSVPR------------TAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRER 448 N V + + + G A+++ A ++ + G G AG+ Sbjct: 396 GVNSVLIGVGDTKHLIEDAEQAQGFRFSEGQRRAINLTATTTDQVSGIVGAAG-AGKTTA 454 Query: 449 VAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGSTVIVD 508 + + +A+ QG V IA + +K + + +T L+G A P +I+D Sbjct: 455 MKTVADLAKSQGLTVVGIAPSSAAADELK--SAGADDTMTLATFNLKGEAAGP-RLLILD 511 Query: 509 QGEKLSLKETLTLLDGAARHNVQVLITDSGQRTG--TGSALMAMKDAGVNTY--RWQGGE 564 + +S ++ LL + + + + D Q GS + +G Y + Sbjct: 512 EAGMVSARDGEALLKKLGKEDRLIFVGDPKQLAAVEAGSPFAQLMRSGAIQYAEITEINR 571 Query: 565 QRPATIISEPDRNVRYA------------------------------------------R 582 Q+ ++ + Sbjct: 572 QKDQKLLDIAQHFAKGKAEEAVALATKYVTEVPVTLPDKPEHKITRQAKTEARRLAIASA 631 Query: 583 LAGDFAASVKAGEESVAQVSGVRE-QAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDS 641 A + + + +SG + + + +R L +G + T++ L + Sbjct: 632 TAKRYLELSQEERATTLVLSGTNAVRKQVNEQVRKGLIDKGEINGESFTVSTLDKADMTR 691 Query: 642 RSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLD-S 700 Y+PG V++ + ++ + V + + ++ + G + + S D Sbjct: 692 AKMRKAGNYKPGQVIK---TAGKQAEQSEVVAVNLDQNLIQVKLSDGTLKSIDASRFDVK 748 Query: 701 SWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPV 760 +F P ++ +A G+++ T + + + + G V Sbjct: 749 KTQVFNPRQIDIAAGDKIIFTNNDQATETKNNQIGLIEEIKDGKAIINSNGAK------V 802 Query: 761 SDSPFTALKLENGWVETPGHSVS---DSATVFASVTQMAMDNATLNGLARSGRDVRLYSS 817 L +++ + T S DS V ++ A R + + + Sbjct: 803 EIDIQRKLHIDHAYCITIHRSQGQTVDSVIVAGEASRTTTAEAAYVACTRERYKLEIITD 862 Query: 818 LDETRTAEKLARHPSFTVVSEQIKTRAGE 846 E R ++ R+ +E +K+ + Sbjct: 863 NTE-RLSKNWVRYADRQTAAEALKSSEEK 890 Score = 362 bits (928), Expect = 8e-98, Method: Composition-based stats. Identities = 144/686 (20%), Positives = 264/686 (38%), Gaps = 58/686 (8%) Query: 821 TRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKL 880 T + S E+ + RA E L+ + TP + + + + Sbjct: 267 TLATRQGKAQLSAEDQYEEWQQRAAEAELDLSQPVGPRVSVTPPEIDLDHTFEHLSERAS 326 Query: 881 AFSMVDLLTEAK-SFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEA 939 + + +A + +EG + + I GD+ ++ +++R + + Sbjct: 327 VINKDAVRLDALINHMSEGATLSTVDKAIQGAAVTGDVFEIEDGI---KRKIITRETLKR 383 Query: 940 EKSILRHILEGKE---------AVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVV 990 E+ IL +G+ L+E + + GQR A + T+D+ + + Sbjct: 384 EQQILLLAQQGRGVNSVLIGVGDTKHLIEDAEQAQGFRFSEGQRRAINLTATTTDQVSGI 443 Query: 991 QGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVD-AQTLASFLHD 1049 G AG GKTT + V L +S+ VVG+ P+ A E++SAG D TLA+F Sbjct: 444 VGAAGAGKTTAMKTVAD----LAKSQGLTVVGIAPSSAAADELKSAGADDTMTLATF--- 496 Query: 1050 TQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPG 1109 + + L +LDE+ MV D + R + GD QL A+ G Sbjct: 497 ------NLKGEAAGPRLLILDEAGMVSARDGEALLKKLGKED-RLIFVGDPKQLAAVEAG 549 Query: 1110 QPFRLQQTRSAADVAIMKEIVRQTPE-LREAVYSLINRDVERALSGLESVKPSQVPRQEG 1168 PF A A + EI RQ + L + E A+ L + ++VP Sbjct: 550 SPFAQLMRSGAIQYAEITEINRQKDQKLLDIAQHFAKGKAEEAV-ALATKYVTEVPVTLP 608 Query: 1169 AWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTL 1228 PEH +T + ++ +LA + A + Y + E R TL Sbjct: 609 D-KPEHKITRQAKTEARRLA-------------------IASATAKRYLELSQEERATTL 648 Query: 1229 IVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALV 1288 +++ N R+ +N + GE+ E V L+ A++ ++R+ ++ + Sbjct: 649 VLSGTNAVRKQVNEQVRKGLIDKGEINGESFTVSTLDKADMTRAKMRKAGNYKPGQVIKT 708 Query: 1289 LVDNVYH-RIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRF 1347 + ++ D LI ++ ++G + I + ++ P I + GD++ F Sbjct: 709 AGKQAEQSEVVAVNLDQNLIQVKLSDGTLKSIDASRFDVKKTQVFNPRQIDIAAGDKIIF 768 Query: 1348 TKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQG 1407 T +D+ N + + + ++ EI ++ HID AY IT H +QG Sbjct: 769 TNNDQATETKNNQIGLIEEIKDGKAIINSNGAKVEIDIQRKL---HIDHAYCITIHRSQG 825 Query: 1408 ASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAH 1467 + I G E+AYVA +R + +++ TDN + + + TA Sbjct: 826 QTVDSVIVA----GEASRTTTAEAAYVACTRERYKLEIITDNTERLSKNWVRYADRQTAA 881 Query: 1468 DVFEPKPDREVMNAERLFSTARELRD 1493 + + ++ E REL+ Sbjct: 882 EALKSSEEKYPHLDEIREELRRELQQ 907 >UniRef50_C7HYW1 Conjugative relaxase domain protein n=1 Tax=Thiomonas intermedia K12 RepID=C7HYW1_THIIN Length = 945 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 206/962 (21%), Positives = 341/962 (35%), Gaps = 142/962 (14%) Query: 1 MMSIAQVRSAGSAGNYYTDKDN---YYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLE 57 M+S +++ + G A YYTD+ + YY + W G+ AEQLGL G VD T +L+ Sbjct: 1 MISKSEITNPGGAAGYYTDQQSAAEYYSGEQVPSAWHGKAAEQLGLTGPVDAAALTGILQ 60 Query: 58 GR----LPDGADLSRMQDGSNR-----------HRPGYDLTFSAPKSVSMMAMLGGDKRL 102 GR P+ + Q G R HR G+D T SAPKSVS+ A++ GD R Sbjct: 61 GRVIESDPETGEARERQLGRTRIDPDTGERSTEHRAGWDFTISAPKSVSVQALVHGDDRA 120 Query: 103 IDAHNQAVDFAVRQVEAL-ASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAV 161 + AH A A+ +E A TR+ + + T L +A F H +SR +PQLHTHA+ Sbjct: 121 LQAHRAATTAALDYLERHGAQTRISSGNFA---KTDGLAVATFEHVSSRAGDPQLHTHAL 177 Query: 162 VANVTQHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKH 221 +ANVT +G +LS++K ++ ++ A +Y L +++ G+ + K Sbjct: 178 IANVTTRDGRACSLSNEK---------LFQHRAAADAVYHNTLSRELQRAGFAVQHDSK- 227 Query: 222 GMWEMPGVPVEA---FSGRSQTIREAVGE------DASLKSRDVAALDTRKSKQHVDPEI 272 G E+ +A FS RS I A+ E D++ SR AALDTR K+ + Sbjct: 228 GHVEIASYSKDALRDFSTRSAEIEAALAERGQTRADSTALSRQAAALDTRHDKELPETRA 287 Query: 273 KMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKV 332 A+ Q E ++ + A R P + AV +AIA LSER+ Sbjct: 288 AHADRWQAQAE-ALSVKPAERSTATAAAARMTRSDPEA--------AVDKAIAHLSEREA 338 Query: 333 QFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKG-LFTSGIHVLDELS 391 F D L R + IE+ ID L+ K L+TS + E Sbjct: 339 VFGKHD-LHREAARFSAGSATIEQIEKEIDRRERSGDLVQQPGHKADLYTSRDALEAERD 397 Query: 392 VRALSRDIMKQNRVTVHP------------EKSVPRTAGYSDAVSVLAQDRPSLAIVSGQ 439 ++ + P +K + A + V G Sbjct: 398 TAKRLDAGRGEHEQIMTPREFDTALRQFEKQKGFSLSDEQRAASRQILTGDDRFQGVQGL 457 Query: 440 GGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITG--------RR 491 G G+ + + A +G V + M+++ + R Sbjct: 458 AG-TGKTTMLQFVREAAEAKGWTVAGHSNGSEQAATMERESGIKSTTTASHLIDQQKTLR 516 Query: 492 QLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMK 551 + A I+D+ + ++ + + + + + A A + Sbjct: 517 DAPDRPAAPARELRIMDEASMSGQRNFRDVIKTTEQSGARTVFLGDKLQHQSVEAGRAFE 576 Query: 552 DA---------GVNTYRWQGGEQRPATI-------------------------------- 570 A G + R Q E A + Sbjct: 577 RAQKHMPTATLGEASIRRQTTEHMKAAVSDVLARRHGDALRKIQTVEVRPERDKLAPGAT 636 Query: 571 ------ISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVR-EQAILTQAIRSELKTQGV 623 + D R+A D+ A ++ ++ L AIR+ELK G Sbjct: 637 REQHRDAARADNAHLVQRIAKDYTALPADQRAKTLVITATNADRKALNNAIRAELKASGA 696 Query: 624 LGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETR----SHDRYVIDRVTAQSH 679 L T+ AL + + Y PG V++ R + + ++++ Sbjct: 697 LA-DGKTVNALRSADMTKVEAKRAENYAPGQVVQLQQDAKRAPYAKGAQLEVVATDSRTN 755 Query: 680 SLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIP-------GLRVSGG 732 +LT RD QG + + + + E A G+R+R T GL V G Sbjct: 756 TLTCRDVQGREVRLDPAR--EKLTAYTRETREFAQGDRIRFTENHKLPTRDGEGLAVRNG 813 Query: 733 DRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSV----SDSATV 788 V D +T+ + + + LK E+ +V T + Sbjct: 814 QSAIVEKTRGDQITLRIGEGKTAQRIEIDAK--ANLKAEHNYVTTSHSAQGLTYDKVFIH 871 Query: 789 FASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETS 848 + D T + R+ + LY+ D + ++ T + R+ Sbjct: 872 HNTEGGRHGDRETYVNITRAREEATLYTQ-DVGKAEKQAGAELQKTAALDLQPERSPAPD 930 Query: 849 LE 850 + Sbjct: 931 RQ 932 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 178/803 (22%), Positives = 305/803 (37%), Gaps = 72/803 (8%) Query: 721 TGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGH 780 T +S Q + ++ + + A V +++ + + Sbjct: 183 TRDGRACSLSNEKLFQHRAAADAVYHNTLSRELQRAGFAVQHDSKGHVEIASYSKDALRD 242 Query: 781 SVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQI 840 + SA + A++ + A L+R + + D+ + A + +E + Sbjct: 243 FSTRSAEIEAALAERGQTRADSTALSRQAAALD--TRHDKELPETRAAHADRWQAQAEAL 300 Query: 841 KTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTG 900 + E S T + + + A+ A+ + ++ F DL EA F+A Sbjct: 301 SVKPAERSTAT--AAAARMTRSDPEAAVDKAIAHLSEREAVFGKHDLHREAARFSAGSAT 358 Query: 901 FTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLME- 959 ++ EI+ + + GDL+ G+ L SR + EAE+ + + G+ +M Sbjct: 359 IEQIEKEIDRRERSGDLVQQP---GHKADLYTSRDALEAERDTAKRLDAGRGEHEQIMTP 415 Query: 960 --------RVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNM 1011 + + L+ QRAA+R IL DRF VQG AG GKTT + V A Sbjct: 416 REFDTALRQFEKQKGFSLSDEQRAASRQILTGDDRFQGVQGLAGTGKTTMLQFVREA--- 472 Query: 1012 LPESERPRVVGLGP-THRAVGEMRSAGVDAQTLASFLHDTQ--LQQRSGETPDFSNTLFL 1068 E++ V G + +A R +G+ + T AS L D Q L+ + L + Sbjct: 473 -AEAKGWTVAGHSNGSEQAATMERESGIKSTTTASHLIDQQKTLRDAPDRPAAPARELRI 531 Query: 1069 LDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKE 1128 +DE+SM G + G R V GD Q Q++ G+ F Q Sbjct: 532 MDEASMSGQRNFRDVIKTTEQSGARTVFLGDKLQHQSVEAGRAFERAQKHMPTATLGEAS 591 Query: 1129 IVRQTPE-LREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKL 1187 I RQT E ++ AV ++ R AL +++V+ + A + + + A L Sbjct: 592 IRRQTTEHMKAAVSDVLARRHGDALRKIQTVEVRPERDKLAPGATREQHRDAARADNAHL 651 Query: 1188 AEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDV 1247 + I +DYT + R +TL++T N DR+ LN+ I Sbjct: 652 V---------------------QRIAKDYTALPADQRAKTLVITATNADRKALNNAIRAE 690 Query: 1248 REKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALV--------LVDNVYHRIAG 1299 + +G L + V L +A++ E +R + + + + Sbjct: 691 LKASGALADGK-TVNALRSADMTKVEAKRAENYAPGQVVQLQQDAKRAPYAKGAQLEVVA 749 Query: 1300 ISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDR------- 1352 +T +D +G + P E +T YT +T GDR+RFT++ + Sbjct: 750 TDSRTNTLTCRDVQGREVRLDPAR---EKLTAYTRETREFAQGDRIRFTENHKLPTRDGE 806 Query: 1353 ERGYVANSVWTVTAVSGDSVTLSDGQ-QTREIRPGQEQAEQHIDLAYAITAHGAQGASET 1411 V GD +TL G+ +T + +A + Y T+H AQG + Sbjct: 807 GLAVRNGQSAIVEKTRGDQITLRIGEGKTAQRIEIDAKANLKAEHNYVTTSHSAQGLTYD 866 Query: 1412 FAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDV-- 1469 TEG R G YV ++R ++ +YT + +QK A D+ Sbjct: 867 KVFIHHNTEGGRH---GDRETYVNITRAREEATLYTQDVGKAEKQAGAELQKTAALDLQP 923 Query: 1470 -FEPKPDREVMNAERLFSTAREL 1491 P PDR+ ER + REL Sbjct: 924 ERSPAPDRQP-EPERERTLEREL 945 >UniRef50_A3EUE2 Probable TrwC protein n=2 Tax=Leptospirillum sp. Group II RepID=A3EUE2_9BACT Length = 1128 Score = 371 bits (952), Expect = e-100, Method: Composition-based stats. Identities = 151/684 (22%), Positives = 276/684 (40%), Gaps = 89/684 (13%) Query: 843 RAGETSLETAISHQKSALHTP---AQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGT 899 R E S E I + + + A++A+ A+ ++ A +L+ A Sbjct: 302 RKIEQSFEKGIGQKYLSPSSRLEIAREALKFAIEHHTERESAVKGGELIRTALRDGRGKI 361 Query: 900 GFTELGGEINAQIKRGDLL-YVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLM 958 ++ + G L+ D G L+ SR + E EK IL+ G+ A+ P+M Sbjct: 362 TMEDMKKAVEEAKAEGSLIRQADALAGSKQNLVTSREALEREKRILKFEKAGRGAIDPVM 421 Query: 959 ERVPGELMEK---------LTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMS-- 1007 E + L + Q+AA MIL T +R+ + GYAG GKTT + + Sbjct: 422 NIFQAEATLRAIQEREGLTLNAEQKAAAMMILTTGNRYVGINGYAGTGKTTMLKPAIESL 481 Query: 1008 ---AVNMLPESERPRVVGLGPTHRAVGEMRSAGV-DAQTLASFLHDTQLQQRSGETPDFS 1063 A ++ V+GLGP H AV +R AG+ +++TL S+L D R Sbjct: 482 QNGAAFSALKNAGYEVIGLGPQHSAVHALRDAGIIESRTLQSWLAD-----RQAGKALTE 536 Query: 1064 NTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADV 1123 T+ ++DE+ + D+ A I G RAV GD Q +++A G F + Q ++ + Sbjct: 537 KTVVVIDEAGLTNAKDLESAMKRIEKAGARAVLVGDIKQYESVAAGPAFAMLQ-KAGMET 595 Query: 1124 AIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQ 1183 + E+ RQ E V +E LE + ++ Sbjct: 596 VYVTEMQRQRNA-PENVREAARLSIESPEKALEKLSIREIR------------------- 635 Query: 1184 EAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSM 1243 P ++A+ +Y +++TL++T +E R+ +N Sbjct: 636 --------------------NPQERFKALSEEYLKSL--DKKETLVLTGTHEARKAVNEN 673 Query: 1244 IHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDA--------LVLVDNVYH 1295 I + L + + + +R+ ++E +D + + Sbjct: 674 IREAL----NLKGKGEEFSRFEAGDFTEARKKRIDSYEVGQDVRFGKDYRSMGVQAGEVG 729 Query: 1296 RIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSD-RER 1354 ++A + ++ G + L+ +G + +++PRE +G + +T+ + GDR+R T ++ ++ Sbjct: 730 KVADVDREKGTVLLEMEDGRSVVLTPRELSGKGHEIGQLETVELTKGDRIRITGNELKQE 789 Query: 1355 GYVANSVWTVTAVSGDSVTLS-DGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFA 1413 G V D++ + D + +++PG E ID YA T H AQG Sbjct: 790 GITNGMRGEVIESKHDTLLVRLDNGKEFDLKPGSRPVE--IDHGYAQTGHSAQGLGAETV 847 Query: 1414 IALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPK 1473 I ++ S Y L+R K V +TD+++ + A+ K A DV + Sbjct: 848 ILDLPSDS---RTLNERSFYTNLTRTKGEVVAFTDDQERLSGAVTRKNDKTMALDVEKQS 904 Query: 1474 PDREVMNAERLFSTARELRDVAAG 1497 ++ +R S+ E ++ AG Sbjct: 905 REK---TRQREQSSGLEKENIVAG 925 Score = 324 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 151/949 (15%), Positives = 333/949 (35%), Gaps = 121/949 (12%) Query: 2 MSIAQVRSAGSAGNYYTDKDNYYVLGSMGE----RWAGRGAEQLGLQGSVDKDVFTRLLE 57 M++ + S G YY KD+YY+ GE W G+ A ++GL G VD + + L Sbjct: 1 MALGKNISPGQGKTYY-RKDDYYLEREGGEDHKLEWGGKLASEMGLSGKVDAEDWKNALN 59 Query: 58 GRLPDGADLSR-----MQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDA----HNQ 108 G PDG + G R G D +PK+VSM+ ++ L D + Sbjct: 60 GHFPDGTRIKGGSFKDPDTGELLKRAGTDFVIESPKTVSMLYAATDNQDLKDWIVKTQAE 119 Query: 109 AVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH 168 + +E+ R DG++ TG + H T+R+ E +H H V NVT++ Sbjct: 120 VEKLSFDYLESQIGARRGKDGKT-WETTGQALYGHVRHFTNREGECFIHAHGVFLNVTRN 178 Query: 169 -NGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMP 227 +G+++ +++D++ + + + ++ G + ++ Sbjct: 179 SDGKYQAMTNDRMMQYQRLVKEMGD---------AHWARRLSEKGIGIGKGKYGEV-QIA 228 Query: 228 GVP---VEAFSGRSQTIREAV-------GEDASLKSRDVAALDTRKSKQHVDPEIKMAEW 277 +E S R + I + + E+A+ +D A TRK+K+ + + W Sbjct: 229 DFSREQIEFSSSRGRNIEKYIREKWGVGREEATQAMKDEAWERTRKAKKVHELDGLETRW 288 Query: 278 MQTLKETGFD--IRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFT 335 + KE G D +R + ++ + L+P + ++A+ AI +ER+ Sbjct: 289 KEEGKEAGIDGVVRKIEQSFEKGIGQKYLSPSSRLE---IAREALKFAIEHHTERESAVK 345 Query: 336 YTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDR-----EKGLFTSGIHVLDEL 390 +++ + +E + ++EA + LI ++ L TS + E Sbjct: 346 GGELIRTALRDG-RGKITMEDMKKAVEEAKAEGSLIRQADALAGSKQNLVTSREALEREK 404 Query: 391 SVRALSRDIM------------KQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSG 438 + + + + + + A A ++ ++G Sbjct: 405 RILKFEKAGRGAIDPVMNIFQAEATLRAIQEREGLTLNAEQKAAAMMILTTGNRYVGING 464 Query: 439 QGGAAGQRERVAELVM---------MAREQGREVQIIAADRRSQMNMKQDERLSGELITG 489 G G+ + + + G EV + + ++ + + Sbjct: 465 YAG-TGKTTMLKPAIESLQNGAAFSALKNAGYEVIGLGPQHSAVHALRDAGIIESRTLQS 523 Query: 490 RR-QLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR---TGTGS 545 G A T + V++D+ + K+ + + + + ++ ++ G Sbjct: 524 WLADRQAGKALTEKTVVVIDEAGLTNAKDLESAMKRIEKAGARAVLVGDIKQYESVAAGP 583 Query: 546 ALMAMKDAGVNTYRWQGGEQRPAT-----------------------IISEPDRNVRYAR 582 A ++ AG+ T +++ I + R+ Sbjct: 584 AFAMLQKAGMETVYVTEMQRQRNAPENVREAARLSIESPEKALEKLSIREIRNPQERFKA 643 Query: 583 LAGDFAASVKAGEESVAQVSGVRE-QAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDS 641 L+ ++ S+ E ++G E + + + IR L L + Sbjct: 644 LSEEYLKSLDKKE--TLVLTGTHEARKAVNENIREAL----NLKGKGEEFSRFEAGDFTE 697 Query: 642 RSRYLRDMYRPGMVMEQ----WNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISS 697 + D Y G + + ++ + + V + ++ L G + V+ Sbjct: 698 ARKKRIDSYEVGQDVRFGKDYRSMGVQAGEVGKVADVDREKGTVLLEMEDGRSVVLTPRE 757 Query: 698 L-DSSWSLFRPEKMPVADGERLRVTGKI-PGLRVSGGDRLQVASVSEDAMTVVVPGRAEP 755 L + + E + + G+R+R+TG ++ G R +V D + V + E Sbjct: 758 LSGKGHEIGQLETVELTKGDRIRITGNELKQEGITNGMRGEVIESKHDTLLVRLDNGKEF 817 Query: 756 ATLPVSDSPFTALKLENGWVETPGHSVSDSA-----TVFASVTQMAMDNATLNGLARSGR 810 P S ++++G+ +T GHS S ++ + + L R+ Sbjct: 818 DLKPGSRPV----EIDHGYAQT-GHSAQGLGAETVILDLPSDSRTLNERSFYTNLTRTKG 872 Query: 811 DVRLYSSLDETRTAEKLARHPSFTVVS--EQIKTRAGETSLETAISHQK 857 +V ++ E + ++ + +Q + + + + + + Sbjct: 873 EVVAFTDDQERLSGAVTRKNDKTMALDVEKQSREKTRQREQSSGLEKEN 921 >UniRef50_B6AM13 Putative uncharacterized protein n=1 Tax=Leptospirillum sp. Group II '5-way CG' RepID=B6AM13_9BACT Length = 1140 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 159/683 (23%), Positives = 275/683 (40%), Gaps = 90/683 (13%) Query: 843 RAGETSLETAISHQKSALHTPAQQA---IHLALPVVESKKLAFSMVDLLTEAKSFAAEGT 899 R+ E E I + + + A + A+ ++ A +L+ A Sbjct: 309 RSLEEQFEKGIKPKYLSPEKRLEAARDSLKFAIEHHTERESAVKEGELIRTALQDGRGKI 368 Query: 900 GFTELGGEINAQIKRGDLL-YVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLM 958 +L I+ G L+ D L+ S + E EK IL G+ +V P++ Sbjct: 369 TMEDLKKAIDEAKDSGVLIRQADDLAKSKQNLVTSHEALEREKRILSFEKAGRGSVEPVL 428 Query: 959 ERVPGELMEK---------LTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAV 1009 + E + L + Q+AA RMIL T +R++ + GYAGVGKTT + + ++ Sbjct: 429 NPLQAENALEAIQEKEGLILNAEQKAAARMILTTDNRYSGINGYAGVGKTTMLKPAIESL 488 Query: 1010 NMLPE-----SERPRVVGLGPTHRAVGEMRSAGV-DAQTLASFLHDTQLQQRSGETPDFS 1063 + +V+GLGP H AV ++ AG+ ++QTL S+L D R Sbjct: 489 QNGAAFSVLTNAGYKVIGLGPQHSAVHALKDAGIIESQTLQSWLAD-----RQAGKTLNG 543 Query: 1064 NTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADV 1123 T+ ++DE+ + DM A I G RAV GD Q +++A G F + Q ++ + Sbjct: 544 KTVVVIDEAGLTNAKDMESAMKRIEKAGARAVLVGDIKQYESVAAGPAFAMLQ-KAGMET 602 Query: 1124 AIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQ 1183 + E+ RQ E V VE LE ++ ++ E Sbjct: 603 VYVTEMQRQNKAA-ENVKEAARLSVESPEKALEKMEIREIRNAE---------------- 645 Query: 1184 EAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSM 1243 Y A+ +Y ++ + RE TL +T +E R+ +N Sbjct: 646 -----------------------ERYRAMADEYL-KSKDPRE-TLCLTGTHEARKAVNEN 680 Query: 1244 IHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDA--------LVLVDNVYH 1295 + + L + + + + +R+ ++E +D L + Sbjct: 681 VRESLG----LSGKGHGFTRYEAGDFTEAQKKRIDSYEEGQDIRFGKDYRSLGVKSGEIG 736 Query: 1296 RIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRER- 1354 ++ + K++G + L+ +G ++PRE +G + + I G+R+R T ++ ++ Sbjct: 737 KVEDVDKENGTVRLRMEDGRDVTMTPREMSGKGHEIGKVEEIEFSKGERIRITGNEHKKE 796 Query: 1355 GYVANSVWTVTAVSGDSVTLS-DGQQTREIRPGQEQAEQHIDLAYAITAHGAQGA-SETF 1412 G V + DS+ + D + E++PG E ID YA T H AQG +ET Sbjct: 797 GITNGMRGEVIESNPDSLRIRLDNGKDFEMKPGSRPVE--IDHGYAQTGHSAQGLGAETV 854 Query: 1413 AIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDV-FE 1471 + L S Y L+R K V+ +TD+R+ A++ K A DV E Sbjct: 855 VLDLPSDS----QTLNRRSFYTNLTRTKGEVKAFTDDRERLAGAVSREKDKTMALDVEKE 910 Query: 1472 PKPDREVMNAERL-FSTARELRD 1493 + +R + ER RE Sbjct: 911 SREERRAVEKERKDLGEEREREQ 933 Score = 346 bits (886), Expect = 6e-93, Method: Composition-based stats. Identities = 164/1055 (15%), Positives = 365/1055 (34%), Gaps = 141/1055 (13%) Query: 2 MSIAQVRSAGSAGNYYTDKDNYYVLGSMGER----WAGRGAEQLGLQGSVDKDVFTRLLE 57 M++ + S G YY KD+YY+ G+ W G+ A +LGL G + + L Sbjct: 1 MALGKNISPGQGETYY-RKDDYYLEREGGDEHKLEWGGKLAPELGLSGKAGAEDWKNALN 59 Query: 58 GRLPD-----GADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDA----HNQ 108 G PD G + G R G D APK++SM+ ++ + D + Sbjct: 60 GHFPDRIEIKGGSFKDPETGELLKRAGTDFVIEAPKTISMLYAATDNQEIKDWIMETQTE 119 Query: 109 AVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH 168 +E+ +R DG++ TG + H +R+ E +H H V N+T++ Sbjct: 120 VAKLTFDYLESQIGSRQGKDGKN-WETTGKALYGHTRHLLNREGECHIHDHGVFLNLTKN 178 Query: 169 N-GEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMP 227 + G++K +++D++ + + ++ G+E V GK+G ++ Sbjct: 179 SGGKYKAMTNDRMMQYQRPAKEMGD---------AHWAKRARERGFEI-VRGKYGEVQLA 228 Query: 228 GVP---VEAFSGRSQTIREAVGEDASLK--------------SRDVAALDTRKSKQHVDP 270 G +EA S RS+ I + + + L+ D A TRK+K+ + Sbjct: 229 GFTREQIEAASSRSRDIEQYIKDKWGLEWSKLPREERNEKRSMHDEAWERTRKAKKVHEL 288 Query: 271 EIKMAEWMQTLKETGFD--IRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLS 328 + W + K G+D +R+ + ++ + L+P + + ++ AI + Sbjct: 289 DRLEDRWKEEAKVIGYDEAVRSLEEQFEKGIKPKYLSPEKRLEA---ARDSLKFAIEHHT 345 Query: 329 ERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDR-----EKGLFTSG 383 ER+ +++ + +E + IDEA LI ++ L TS Sbjct: 346 ERESAVKEGELIRTALQDG-RGKITMEDLKKAIDEAKDSGVLIRQADDLAKSKQNLVTSH 404 Query: 384 IHVLDELSVRALSRDIMKQNRVTVHPEKS------------VPRTAGYSDAVSVLAQDRP 431 + E + + + ++P ++ + A A ++ Sbjct: 405 EALEREKRILSFEKAGRGSVEPVLNPLQAENALEAIQEKEGLILNAEQKAAARMILTTDN 464 Query: 432 SLAIVSGQGGAAGQRERVAELVM---------MAREQGREVQIIAADRRSQMNMKQDERL 482 + ++G G G+ + + + G +V + + +K + Sbjct: 465 RYSGINGYAG-VGKTTMLKPAIESLQNGAAFSVLTNAGYKVIGLGPQHSAVHALKDAGII 523 Query: 483 SGELITGRRQLLEGMAFTPGSTVIV-DQGEKLSLKETLTLLDGAARHNVQVLITDSGQR- 540 + + + G TV+V D+ + K+ + + + + ++ ++ Sbjct: 524 ESQTLQSWLADRQAGKTLNGKTVVVIDEAGLTNAKDMESAMKRIEKAGARAVLVGDIKQY 583 Query: 541 --TGTGSALMAMKDAGVNTYRWQGGEQRPAT-----------------------IISEPD 575 G A ++ AG+ T +++ I + Sbjct: 584 ESVAAGPAFAMLQKAGMETVYVTEMQRQNKAAENVKEAARLSVESPEKALEKMEIREIRN 643 Query: 576 RNVRYARLAGDFAASVKAGEESVAQVSGVRE-QAILTQAIRSELKTQGVLGLPEVTMTAL 634 RY +A ++ S E ++G E + + + +R L L T Sbjct: 644 AEERYRAMADEYLKSKDPRE--TLCLTGTHEARKAVNENVRESL----GLSGKGHGFTRY 697 Query: 635 SPVWLDSRSRYLRDMYRPGMVMEQ----WNPETRSHDRYVIDRVTAQSHSLTLRDAQGET 690 + D Y G + + +S + ++ V ++ ++ LR G Sbjct: 698 EAGDFTEAQKKRIDSYEEGQDIRFGKDYRSLGVKSGEIGKVEDVDKENGTVRLRMEDGRD 757 Query: 691 QVVRISSL-DSSWSLFRPEKMPVADGERLRVTGK-IPGLRVSGGDRLQVASVSEDAMTVV 748 + + + + E++ + GER+R+TG ++ G R +V + D++ + Sbjct: 758 VTMTPREMSGKGHEIGKVEEIEFSKGERIRITGNEHKKEGITNGMRGEVIESNPDSLRIR 817 Query: 749 VPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFA----SVTQMAMDNATLNG 804 + + P S ++++G+ +T + A S +Q + Sbjct: 818 LDNGKDFEMKPGSRPV----EIDHGYAQTGHSAQGLGAETVVLDLPSDSQTLNRRSFYTN 873 Query: 805 LARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLE---TAISHQKSALH 861 L R+ +V+ ++ E + + ++R ++E + ++ Sbjct: 874 LTRTKGEVKAFTDDRERLAGAVSREKDKTMALDVEKESREERRAVEKERKDLGEEREREQ 933 Query: 862 TPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVD 921 +Q + K+ +S + + + N + + + Sbjct: 934 KTMEQGKEEGPERRQEKE------------RSPENDRSREKDRNIANNGEREEKTMDRER 981 Query: 922 VAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMP 956 + + E++ L EG++ P Sbjct: 982 DEEKEKENRWSDLT--DRERNRLETWKEGQKLRFP 1014 >UniRef50_Q1NH26 Putative uncharacterized protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NH26_9SPHN Length = 981 Score = 368 bits (945), Expect = e-99, Method: Composition-based stats. Identities = 187/907 (20%), Positives = 329/907 (36%), Gaps = 71/907 (7%) Query: 8 RSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRLPDGADLS 67 S G+ YY D Y + W G A +L L G VD + F LL G++ G L Sbjct: 9 GSPGNIARYYAIGDYYTKGEAEHSSWGGSLAGELDLSGDVDPETFRSLLAGKV-AGQQLG 67 Query: 68 RMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEALASTRVMT 127 R + H PG+D SAPKSVSMMA+ GD+R++ H +AVD + +E A R Sbjct: 68 RHRAEGIEHHPGWDFAISAPKSVSMMALAMGDERIVQLHERAVDVTLAYLEEHAQRRKRD 127 Query: 128 DGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDKVGKTGFIE 187 +G+ TG L+ A F SR+ +P LHTH VV N+T + + Sbjct: 128 EGKIVHETTGRLLWARFTEHASRELDPHLHTHVVVLNMT-------SGQEGDPMASLETR 180 Query: 188 NVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP---VEAFSGRSQTIREA 244 +YA Q+ G++YR +L + LGYE + + G++E+ GVP +E S R+Q I E Sbjct: 181 AMYAVQMTSGQIYRNELAHGLRELGYEIDFDPRRGLFEIRGVPKALIEEMSQRAQQINEH 240 Query: 245 VGEDA--SLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLR 302 + +R + TR +K + + + +W L + A R A+Q + Sbjct: 241 AQQHGLSGQAARRQSFYATRGAKVKIGIDELLIQWRGRLGPHEKPLEAVRGGAEQVGEH- 299 Query: 303 TLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGID 362 D D +A I SE K D L T + R I+ Sbjct: 300 -----AVPVDRVDAARAALFGIRQ-SEGKEAVNALDRLFTTGLASHVGEVRFQDLRPLIE 353 Query: 363 EAISREQLIPLDREKGL------FTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVP-- 414 R +L+ + G TS V E S+ + R ++ +P Sbjct: 354 AHEERRKLLATRGQTGDEILTRGRTSRRTVRLEQSLAMHLALAVGDGRPVASADRLLPVL 413 Query: 415 ----RTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADR 470 + A+ +A R + + G G AG+ V L A G + +A Sbjct: 414 EQAGLSPEQERALVDMATSRDRVTGLHGVAG-AGKSTLVRSLKDAALP-GTTLIALAPTS 471 Query: 471 RSQMNMKQDERLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNV 530 + + + ++ + G + +++D+ +L ++ L +L+ + Sbjct: 472 AAAAELGEKAQIESRTVASLLA-GGGYGISGNHVLVLDEAGQLGNRQALRVLEISRATGA 530 Query: 531 QVLITDSGQRTGT---GSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYAR----- 582 +V++ ++TG G A M+ G+ T ++ + E + R Sbjct: 531 RVILLGDNKQTGAIEQGKAFWLMQKLGMQTAELTESRRQQTEAMQEAVAHARAENYAASI 590 Query: 583 -------------------LAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGV 623 +A S ++ + V + I+ IR L+ +GV Sbjct: 591 GRLDKVVSGEDAATLAKGVVAEWTRLSPRSRAATNILVLDNASRLIVNSKIREVLQREGV 650 Query: 624 LGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVME----QWNPETRSHDRYVIDRVTAQ-- 677 + E ++ L+P + + L Y G V+ Q Y + V Sbjct: 651 VAAEETRLSVLTPGGHSGQEKRLARFYSGGQVVTFSRNQTGAGLERDAEYRVVGVVRDAQ 710 Query: 678 -SHSLTLRDAQGETQVVRIS-SLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRL 735 + L D QG T + + S ++F E+ +++G+R++ L++ +R Sbjct: 711 GRQRVRLVDEQGRTHLWDPRMAKSSQVNVFVDEQRDLSEGDRIQWRLASRELKLKNAERG 770 Query: 736 QVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQM 795 V + T+ T+ +S + + + + Sbjct: 771 TVEKIEGSLATIRWDRGKRVQTVDLSKHKTWDHGYSETVYSAQSKTYDRVYVLAPVGSPL 830 Query: 796 AMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISH 855 + R+ V+L++ E + EKL + R + + Sbjct: 831 VNGQNFYTAITRARYGVKLWTQDPE-KLVEKLELRSGEKTSGLEGLGRLERDHRDRLATR 889 Query: 856 QKSALHT 862 L Sbjct: 890 HMRHLQQ 896 Score = 294 bits (752), Expect = 2e-77, Method: Composition-based stats. Identities = 134/666 (20%), Positives = 245/666 (36%), Gaps = 79/666 (11%) Query: 854 SHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIK 913 H A +A + E K+ ++ L T + F +L I A + Sbjct: 298 EHAVPVDRVDAARAALFGIRQSEGKEAVNALDRLFTTGLASHVGEVRFQDLRPLIEAHEE 357 Query: 914 RGDLLYVDVAKGYG--TGLLVSRASYEAEKSILRHILEGKEAVMPLMER---VPGELMEK 968 R LL G T SR + E+S+ H+ P+ +P Sbjct: 358 RRKLLATRGQTGDEILTRGRTSRRTVRLEQSLAMHLALAVGDGRPVASADRLLPVLEQAG 417 Query: 969 LTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHR 1028 L+ Q A + + DR T + G AG GK+T R++ A ++ L PT Sbjct: 418 LSPEQERALVDMATSRDRVTGLHGVAGAGKSTLVRSLKDAALP-----GTTLIALAPTSA 472 Query: 1029 AVGEM-RSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALI 1087 A E+ A ++++T+AS L G N + +LDE+ +GN R + Sbjct: 473 AAAELGEKAQIESRTVASLL-------AGGGYGISGNHVLVLDEAGQLGNRQALRVLEIS 525 Query: 1088 AAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVR-QTPELREAVYSLINR 1146 A G R + GD Q AI G+ F L Q + A + E R QT ++EAV Sbjct: 526 RATGARVILLGDNKQTGAIEQGKAFWLMQ-KLGMQTAELTESRRQQTEAMQEAVAHARAE 584 Query: 1147 DVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPM 1206 + ++ L+ V + Sbjct: 585 NYAASIGRLDKV-----------------------------------------VSGEDAA 603 Query: 1207 TLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNT 1266 TL + +V ++T +P +R T I+ N R ++NS I +V ++ G + E+ + VL Sbjct: 604 TLAKGVVAEWTRLSPRSRAATNILVLDNASRLIVNSKIREVLQREGVVAAEETRLSVLTP 663 Query: 1267 ANIRDGELRRLSTW--------ETHRDALVLVDNVYHRIAGISKD---DGLITLQDAEGN 1315 E R + ++ L + +R+ G+ +D + L D +G Sbjct: 664 GGHSGQEKRLARFYSGGQVVTFSRNQTGAGLERDAEYRVVGVVRDAQGRQRVRLVDEQGR 723 Query: 1316 TRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLS 1375 T L PR A + V ++ + + GDR+++ + RE TV + G T+ Sbjct: 724 THLWDPRMAKSSQVNVFVDEQRDLSEGDRIQWRLASRELKLKNAERGTVEKIEGSLATIR 783 Query: 1376 DGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVA 1435 + + ++ + D Y+ T + AQ + L + ++ Y A Sbjct: 784 -WDRGKRVQTVDLSKHKTWDHGYSETVYSAQSKTYDRVYVLAPVGS---PLVNGQNFYTA 839 Query: 1436 LSRMKQHVQVYTDNRQGWTDAIN-NAVQKGTAHDVFE--PKPDREVMNAERLFSTARELR 1492 ++R + V+++T + + + + + +K + + + R+ + + + Sbjct: 840 ITRARYGVKLWTQDPEKLVEKLELRSGEKTSGLEGLGRLERDHRDRLATRHMRHLQQLKE 899 Query: 1493 DVAAGR 1498 D R Sbjct: 900 DQERER 905 >UniRef50_A9I2Z2 Conjugal transfer protein n=1 Tax=Bordetella petrii DSM 12804 RepID=A9I2Z2_BORPD Length = 908 Score = 358 bits (917), Expect = 2e-96, Method: Composition-based stats. Identities = 162/765 (21%), Positives = 283/765 (36%), Gaps = 109/765 (14%) Query: 782 VSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIK 841 S + A ++ + + L + +T+ + H + + I+ Sbjct: 180 SKRSTGIAAELSARGTSRE--EAPHALRQGITLANRQQKTQELSRTDLHRQWRDAAAGIR 237 Query: 842 TRAGETSLETAISHQKSALHT---PAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEG 898 + + I K H AQ +++ A+ + ++ + DLL A A Sbjct: 238 MQFDHAWQQADIQPTKELEHRSDLVAQASLNWAIQHLAERESVMPLADLLQNAVRHAGGH 297 Query: 899 TGFTELGGEINAQIKRGDLLY--------------------------------------- 919 T T + I +Q+ G L+ Sbjct: 298 TDITAIQTAIQSQVDSGTLIREAPHYRSTQDMQSRPMAREGWATEVIRLRGLPQDTALQL 357 Query: 920 VDVAKGYG-----TGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGE--LMEKLTSG 972 VD A G + +R S+EAE IL G+ A + E L LT G Sbjct: 358 VDQAIAEGRLLMESPRYATRKSFEAESRILAAEQAGRGAWHATISDASAESNLDTHLTPG 417 Query: 973 QRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGE 1032 QR A +I SD+ T +QG AG GK+ + M+ + + + L P V Sbjct: 418 QREAVMLIATDSDQITGIQGLAGTGKSF----ALQNTQMILQRQGHTMAALAPYGNMVRN 473 Query: 1033 MRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGG 1092 +R G+ A T+AS L + +R T+ ++DE+ +V M + ALI G Sbjct: 474 LREDGIPANTIASVLSASD--KRPFIDTLGPKTIVVIDEAGVVPVRQMDKLLALIQPTGA 531 Query: 1093 RAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPE-LREAVYSLINRDVERA 1151 + V GDT Q +AI G+ F + Q +M +I RQ E LR+AV ++ Sbjct: 532 KVVLLGDTAQTKAIEAGRAFAMLQES-GMKTVLMADIQRQRSERLRQAVQLAAEGQASQS 590 Query: 1152 LSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEA 1211 L L+ V L Q + + YEA Sbjct: 591 LPLLDQV----------------------------LTIPDQFSTDEHGHKNRDSSARYEA 622 Query: 1212 IVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRD 1271 I + YT + + T++VT N R +N H + G+ + Q+ L + Sbjct: 623 IAQAYTRLSAADQAGTIVVTGTNASRLAINERTHALLGLEGKGHRCQL----LTRHDTTR 678 Query: 1272 GELRRLSTWETHRDALV--------LVDNVYHRIAGISKDDGLIT--LQDAEGNTRLISP 1321 E R ++ + T D +V L +R+ G ++ D L +Q + T+ + Sbjct: 679 AE-RSVARYYTVGDIVVPERDYQCGLKRGEMYRVTGSTRHDRLTVESIQSDQSPTQAMEI 737 Query: 1322 REAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTR 1381 +++Y + GDR+R T++D V + V A+ SVT+ + Sbjct: 738 IPKTMSKLSVYHLSRAELSVGDRVRITRNDAHNDLVNGQLAKVAAIDASSVTIETNGRHV 797 Query: 1382 EIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQ 1441 ++ + ++D AYA T H AQG + I + ++ YV++SR + Sbjct: 798 QLPTDRPL---NMDYAYATTVHSAQGLTCDRVIYNAESFS---RTTSQDTYYVSISRERH 851 Query: 1442 HVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFS 1486 V+TD+ + + ++ KG A D+ +P + + + + Sbjct: 852 EAIVFTDDAKKLPERVDRLTYKGLARDL-QPMVSKHLGHGQNELG 895 Score = 320 bits (820), Expect = 3e-85, Method: Composition-based stats. Identities = 166/898 (18%), Positives = 317/898 (35%), Gaps = 148/898 (16%) Query: 55 LLEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAV 114 +L+G G R + R DLTF APKS+++ A++GGD+RLI A+++AV A+ Sbjct: 1 MLQGDFGRGVAAGRSIRKDAKARAALDLTFGAPKSITLQALIGGDERLIHANDKAVASAL 60 Query: 115 RQVEAL-ASTRVMTDGQSETVLTGNLVMALFNHDTSR-----DQEPQLHTHAVVANVTQH 168 VE R +G+S TGNL++A F H+T+R +P LH HA++ N+TQ Sbjct: 61 VYVEQHLTMGRRKVNGKSRVEHTGNLIIAKFRHETARPTEGAAPDPHLHIHALLMNLTQR 120 Query: 169 -NGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKH-GMWEM 226 +G W LS+ E ++ +Y+ +L+ V ALGY H + + Sbjct: 121 VDGSWVALSN---------EEIFKLLRVTDSIYQAELERNVRALGYAVRHEKSHIELAHI 171 Query: 227 PGVPVEAFSGRSQTIREAVGEDASLKSRDVAALD---TRKSKQHVDPEIKMAEWMQTLKE 283 +E FS RS I + + + AL T ++Q E+ + + ++ Sbjct: 172 SREQIEFFSKRSTGIAAELSARGTSREEAPHALRQGITLANRQQKTQELSRTDLHRQWRD 231 Query: 284 TGFDIRAYRDAADQRADLRTLTPGPASQDGPDV--QQAVTQAIAGLSERKVQFTYTDVLA 341 IR D A Q+AD++ P + D+ Q ++ AI L+ER+ D+L Sbjct: 232 AAAGIRMQFDHAWQQADIQ---PTKELEHRSDLVAQASLNWAIQHLAERESVMPLADLLQ 288 Query: 342 RTVGILPPENGVIERARAGIDEAISREQLI------------------------------ 371 V + I + I + LI Sbjct: 289 NAV-RHAGGHTDITAIQTAIQSQVDSGTLIREAPHYRSTQDMQSRPMAREGWATEVIRLR 347 Query: 372 ------------------PLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKS- 412 L E + + E + A + T+ + Sbjct: 348 GLPQDTALQLVDQAIAEGRLLMESPRYATRKSFEAESRILAAEQAGRGAWHATISDASAE 407 Query: 413 ----VPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAA 468 T G +AV ++A D + + G G G+ + M+ + QG + +A Sbjct: 408 SNLDTHLTPGQREAVMLIATDSDQITGIQGLAG-TGKSFALQNTQMILQRQGHTMAALAP 466 Query: 469 DRRSQMNMKQDERLSGELITGRRQLLEGMAFT----PGSTVIVDQGEKLSLKETLTLLDG 524 N+++D + I + F P + V++D+ + +++ LL Sbjct: 467 YGNMVRNLRED-GIPANTIASVLSASDKRPFIDTLGPKTIVVIDEAGVVPVRQMDKLLAL 525 Query: 525 AARHNVQVLITDSGQRTG---TGSALMAMKDAGVNT-----YRWQGGEQRPATI------ 570 +V++ +T G A ++++G+ T + Q E+ + Sbjct: 526 IQPTGAKVVLLGDTAQTKAIEAGRAFAMLQESGMKTVLMADIQRQRSERLRQAVQLAAEG 585 Query: 571 -------------------------ISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVR 605 D + RY +A + A + V+G Sbjct: 586 QASQSLPLLDQVLTIPDQFSTDEHGHKNRDSSARYEAIAQAYTRLSAADQAGTIVVTGTN 645 Query: 606 E-QAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVM---EQWNP 661 + + + + L +G L+ R + Y G ++ + Sbjct: 646 ASRLAINERTHALLGLEGK----GHRCQLLTRHDTTRAERSVARYYTVGDIVVPERDYQC 701 Query: 662 ETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVR----ISSLDSSWSLFRPEKMPVADGER 717 + + Y + T LT+ Q + + I S S++ + ++ G+R Sbjct: 702 GLKRGEMYRVTGSTRHDR-LTVESIQSDQSPTQAMEIIPKTMSKLSVYHLSRAELSVGDR 760 Query: 718 LRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVET 777 +R+T + G +VA++ ++T+ GR +D P + + T Sbjct: 761 VRITRNDAHNDLVNGQLAKVAAIDASSVTIETNGRHVQL---PTDRPLNM---DYAYATT 814 Query: 778 PGHSV----SDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHP 831 + S ++ + ++R + +++ D + E++ R Sbjct: 815 VHSAQGLTCDRVIYNAESFSRTTSQDTYYVSISRERHEAIVFTD-DAKKLPERVDRLT 871 >UniRef50_C5SIG5 Conjugative relaxase domain protein n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SIG5_9CAUL Length = 1047 Score = 353 bits (906), Expect = 3e-95, Method: Composition-based stats. Identities = 191/1013 (18%), Positives = 359/1013 (35%), Gaps = 160/1013 (15%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGE---RWAGRGAEQLGLQGSVDKDVFTRLLE 57 M+ I +++SA +G+YY KD+YYV G RW G GA QLGL G + F +LL+ Sbjct: 1 MLKITRLKSASRSGDYY-GKDDYYVTGEANTPNLRWGGEGAAQLGLVGEANSLDFKKLLK 59 Query: 58 GR--LPDGADLSRMQDGSN----------------RHRPGYDLTFSAPKSVSMMAMLGGD 99 G PDG+ LS+ + +H PG+D+TFSA KS S+MA++ GD Sbjct: 60 GINPDPDGSALSKADEALREQAGASGETDPERTIPKHAPGWDMTFSATKSASIMALVAGD 119 Query: 100 KRLIDAHNQAVDFAVRQVEAL-ASTRVMTDGQS-ETVLTGNLVMALFNHDTSRDQEPQLH 157 R+ A N++V + E A TR TDG + + +LTGNL A +H SR +P++H Sbjct: 120 DRIQAAFNRSVQSTMDYAEKHFAITRQRTDGGAPKQILTGNLTYATTSHSMSRAGDPEMH 179 Query: 158 THAVVANVTQ-HNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETE 216 H V+AN T+ +G W+ L + +Y +Q G + + + +++ LGY Sbjct: 180 NHVVLANATRMEDGTWRALET---------APLYKHQQFLGNVQKAEFAHELKKLGYNLV 230 Query: 217 VVGKHGMWEM------------------PGVPVEAFSGRSQTI-------REAVGEDASL 251 G WE+ + ++ FS R I G + S Sbjct: 231 QGKTQGTWEIAEFSAAYRGENDKAGIGPADLLIDTFSKRHVEIMGKIAAAEADKGRELSK 290 Query: 252 KSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPG---- 307 R L R K D +++ A W + ++ G D+ AA R + LTP Sbjct: 291 GERQTLILKDRPQKLLTDRDVQQALWKEVARDAGVDLDQIVSAAKTREVGQDLTPQRKGD 350 Query: 308 ---------------PASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENG 352 + ++ + + FT V+ + + Sbjct: 351 IGLAGKVMAYIDEKVLGRTRDLSAEASLALGLRSQERQSTIFTPYAVIFDAMLANGNRHR 410 Query: 353 VIERARAGIDEAISREQLIPLDREK-GLFTSGIHVLDELSVRALSRDIMKQNRV------ 405 + + G + R +++ DREK T+ + E ++ +++ Sbjct: 411 IQDYQATGF---LQRPEIVKADREKLAHITTQRAITMEDAIVERVIRSQARSKAFTPDVS 467 Query: 406 ------TVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRE--RVAELVMMAR 457 V K++ + V + D +++ G G V + + Sbjct: 468 DRAMYGIVADGKALAPNTQQAAVVQHVLTDGARYSVIHGSAGTGKTTTFDLVRQTLDRLS 527 Query: 458 EQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFT----------PGSTVIV 507 E+ +A +++ + ++ E + + + G ++V Sbjct: 528 AGQIEIVALAPTHKAKGELADRAGIATETVQMFLLQQQKGSTQTAPSSQMANLKGKWLLV 587 Query: 508 DQGEKLSLKETLTLLDGAARHNV-QVLIT-DSGQ--RTGTGSALMAMKDAGVNTYR---- 559 D+G LS + ++D A R V +V+ + D Q G+ AG +T Sbjct: 588 DEGSMLSNVQMDRIIDVAERSGVDKVIFSFDERQLAAMEAGAPTRLAMHAGASTVYLKDN 647 Query: 560 ---------------------WQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESV 598 W+ + + + A A + G ++ Sbjct: 648 VRQAQMPVLRAGIMKMADGKPWEALPSIRPYVTETRSNDDQILARAA-VAKWREMGPDTK 706 Query: 599 AQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQ 658 V + + + IR+EL+ G++G +V + Y G + Sbjct: 707 VVVGTNKMRGLANAMIRTELQGMGLVGREDVAHKTYVSENRSPEQLGMITAYALGQRIIF 766 Query: 659 WN-PETRSHDRYVIDRV---TAQSHSLTLRDAQGETQVVRISSLDSS-----WSLFRPEK 709 E R+ + V +++ LTL+ + + ++ L S + ++R + Sbjct: 767 HKADEANRIGRHTVHSVVGIDMRTNRLTLQSTEYGKRSYNLAGLTSGRDEPTFGVYREQT 826 Query: 710 MPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVP------GRAEPATLPVSDS 763 + ++ G++L V+ D VA++ + + + + Sbjct: 827 IKLSVGDQLAWNITDKKAGVTNNDAFTVAAIKGSKLATQREVEIDGVRTLKTQVFDLEND 886 Query: 764 PFTALKLENGWVETPGHSVSDS-ATVFASVTQM----AMDNATLNGLARSGRDVRLYSSL 818 P A + +G+ T + S V A + A +R ++ + + Sbjct: 887 PV-ARFMSHGYSLTANRAQGASFGKVVAVLGSYMGEFANQARGYVMASRPRQEFQWVTDD 945 Query: 819 DE---TRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAI 868 + R AE +PS ++ A + A P + + Sbjct: 946 LKSLFRRLAENDGINPSALNHIDRAMDLADKADRVKPAPQPDKAPEIPKPEPV 998 Score = 280 bits (715), Expect = 4e-73, Method: Composition-based stats. Identities = 133/635 (20%), Positives = 238/635 (37%), Gaps = 88/635 (13%) Query: 864 AQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVA 923 A+ ++ L L E + F+ ++ +A + ++R +++ D Sbjct: 374 AEASLALGLRSQERQSTIFTPYAVIFDAMLANGNRHRIQDYQA--TGFLQRPEIVKADRE 431 Query: 924 KGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKL---------TSGQR 974 K + ++ + E +I+ ++ + V M + + Q Sbjct: 432 KLAH---ITTQRAITMEDAIVERVIRSQARSKAFTPDVSDRAMYGIVADGKALAPNTQQA 488 Query: 975 AATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMR 1034 A + +L R++V+ G AG GKTT F V ++ L + +V L PTH+A GE+ Sbjct: 489 AVVQHVLTDGARYSVIHGSAGTGKTTTFDLVRQTLDRLSAGQ-IEIVALAPTHKAKGELA 547 Query: 1035 S-AGVDAQTLASFLHDTQLQQR----SGETPDFSNTLFLLDESSMVGNTDMARAYALIAA 1089 AG+ +T+ FL Q S + + L+DE SM+ N M R + Sbjct: 548 DRAGIATETVQMFLLQQQKGSTQTAPSSQMANLKGKWLLVDEGSMLSNVQMDRIIDVAER 607 Query: 1090 GG-GRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQT--PELREAVYSLINR 1146 G + + S D QL A+ G P RL + A +K+ VRQ P LR + + + Sbjct: 608 SGVDKVIFSFDERQLAAMEAGAPTRLAM-HAGASTVYLKDNVRQAQMPVLRAGIMKMADG 666 Query: 1147 DVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPM 1206 AL + VTE + + LA Sbjct: 667 KPWEALPSI-----------------RPYVTETRSNDDQILAR----------------- 692 Query: 1207 TLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNT 1266 A V + P+ T +V N+ R + N+MI + G +G+E V + Sbjct: 693 ----AAVAKWREMGPD----TKVVVGTNKMRGLANAMIRTELQGMGLVGREDVAHKTYVS 744 Query: 1267 ANIRDGELRRLSTWETHR--------DALVLVDNVYHRIAGISKDDGLITLQDAEGNTRL 1318 N +L ++ + + +A + + H + GI +TLQ E R Sbjct: 745 ENRSPEQLGMITAYALGQRIIFHKADEANRIGRHTVHSVVGIDMRTNRLTLQSTEYGKRS 804 Query: 1319 ISPREAVAEG----VTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTL 1374 + + +Y TI++ GD++ + +D++ G N +TV A+ G + Sbjct: 805 YNLAGLTSGRDEPTFGVYREQTIKLSVGDQLAWNITDKKAGVTNNDAFTVAAIKGSKLAT 864 Query: 1375 SDGQ--------QTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLM 1426 +T+ + + + Y++TA+ AQGAS +A+ G+ Sbjct: 865 QREVEIDGVRTLKTQVFDLENDPVARFMSHGYSLTANRAQGASFGKVVAVLGSYMGE--F 922 Query: 1427 AGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAV 1461 A YV SR +Q Q TD+ + + Sbjct: 923 ANQARGYVMASRPRQEFQWVTDDLKSLFRRLAEND 957 >UniRef50_A6Q5N5 Putative uncharacterized protein n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q5N5_NITSB Length = 961 Score = 351 bits (900), Expect = 2e-94, Method: Composition-based stats. Identities = 172/952 (18%), Positives = 349/952 (36%), Gaps = 106/952 (11%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQG--SVDKDVFTRLLEG 58 M+SI++ ++ A +YY ++NYY S + G A +G++ V KD F LL Sbjct: 1 MISISKFQNKDQASSYY-QEENYYQKNSENGFFHGAAAPAVGVKNGQEVTKDTFQSLLNN 59 Query: 59 RLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMA----MLGGDKR---LIDAHNQAVD 111 + ++ + R G+D+TFSAPKSVS+M G + L +AH +A Sbjct: 60 THAITGEALT-KNTTANKRAGFDVTFSAPKSVSVMMEALQANGLTEEALKLREAHERATQ 118 Query: 112 FAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSR-----DQEPQLHTHAVVANVT 166 A+ ++ A TR+ + + +V A F HDT+R + +PQLHTH + NV Sbjct: 119 KAMEEIGKYALTRIRNEAGEIERIKAGIVYASFQHDTTRITPSGNIDPQLHTHNFIFNVV 178 Query: 167 QHNGEWKTLSSDKVGKTGFIEN--VYANQIAFGRLYREKLKEQVEALGYETEVVG-KHGM 223 + + + KTG IEN +Y N++ FG+LYR +L ++ LGY+ E K+G Sbjct: 179 SY------VDKNGEFKTGAIENFGIYKNKMYFGQLYRNELANNLKELGYKIEFTDAKNGF 232 Query: 224 WEMPGVPVE---AFSGRSQTIREAVGED-------ASLKSRDVAALDTRKSKQHVDPEIK 273 +E+ E FSGRS+++R + E K ++ D + KQ V+ E Sbjct: 233 FELQDFKKEELKEFSGRSKSMRALIEEYREKYPNTNESKLLEIINQDIKPPKQEVEREEI 292 Query: 274 MAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQ 333 + + L+ G + R + + ++E Sbjct: 293 LNKNKNRLENIGITKERIEELLHNREKE------SEGLKQAKADEFIELTARAITETNST 346 Query: 334 FTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVR 393 F+ ++ + + E I +++I LD ++T+ + E + Sbjct: 347 FSKEEIHKDAMKLGLKHGITKEELEEAIK---FNDKIIQLD--NDIYTTIDVLAAEKYII 401 Query: 394 ALSRDIMKQNRVTVHPE------KSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRE 447 + D Q T G + S + ++ G G G+ Sbjct: 402 SKVMDKTGQLYKDRGKIENFIKNNYDNMTVGQKEMFSKILISDSQFMVIQGDAG-TGKTY 460 Query: 448 RVAELVM--MAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFT--PGS 503 + L A + RE+ ++ ++ +++D + I F Sbjct: 461 SMKALKEFLEAEQPNREIIGLSFTGKAAAGLEEDSGIKSSTIHSFLYSEAKDEFKESKER 520 Query: 504 TVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR---TGTGSALMAMKDAGVNTYRW 560 +IVD+ + ++ ++ A ++N +V+ ++ G M+ G T Sbjct: 521 LIIVDEAGLVGSRQIAKIIKIAKKNNDKVVFVGDVKQFKAIAAGDIFAEMQRRGAETITL 580 Query: 561 QGGEQRPATIIS-------------------------EPDRNVRYARLAGDFAASVKAGE 595 ++ E D+ Y ++ D+ + Sbjct: 581 GETLRQKTEFTKEVVRLTKDQEFDQLFSLLLNSNKLLEEDKGELYQQIVNDY---FEKKG 637 Query: 596 ESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMV 655 + + S ++ I+ Q I K + + +T +++ Y + Sbjct: 638 DLLIIASKNEDRKIINQII----KKKNNNSNKSIKITINEMQSFSGINKFFAYSYLNTTI 693 Query: 656 MEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADG 715 P ++ + + T H+L +R + E + + + +F+ + G Sbjct: 694 NIGKIPNFKNGEIVEVVD-TKDEHTLIVRTERREEKELDLKKYADDIVVFKKVEKEFVVG 752 Query: 716 ERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWV 775 E++ T + G+ + + ED + ++ G+ S ++G+ Sbjct: 753 EKIVFTKNSKE--IKNGEIDYIKEIKEDGIILLKSGK--------SFYCHHYNYFDHGYA 802 Query: 776 ET--PGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSF 833 T V+ + +Q+A N+ + R+ D+++Y+ E A +++ Sbjct: 803 ITDYKAQGVTARNVAILADSQIASFNSFYTQVTRAKEDLKIYTQNKEELRA-NVSKKAHK 861 Query: 834 TVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMV 885 + + +K E A +KS + + + + ++L F + Sbjct: 862 SSTLQYLKGEKNEHKRNAAGDFEKSGSYKKSISEHKREIGNIRKERLRFKEL 913 Score = 272 bits (695), Expect = 9e-71, Method: Composition-based stats. Identities = 115/629 (18%), Positives = 229/629 (36%), Gaps = 75/629 (11%) Query: 861 HTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYV 920 A + I L + FS ++ +A + E+ IK + Sbjct: 326 QAKADEFIELTARAITETNSTFSKEEIHKDAMKLGLK---HGITKEELEEAIK-----FN 377 Query: 921 DVAKGYGTGLLVSRASYEAEKSILRHILEGKEAV---MPLMERVPGELMEKLTSGQRAAT 977 D + + AEK I+ +++ + +E + +T GQ+ Sbjct: 378 DKIIQLDNDIYTTIDVLAAEKYIISKVMDKTGQLYKDRGKIENFIKNNYDNMTVGQKEMF 437 Query: 978 RMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRS-A 1036 IL + +F V+QG AG GKT +A+ + E ++GL T +A + + Sbjct: 438 SKILISDSQFMVIQGDAGTGKTYSMKALKEFLE--AEQPNREIIGLSFTGKAAAGLEEDS 495 Query: 1037 GVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVA 1096 G+ + T+ SFL+ + E + L ++DE+ +VG+ +A+ + + V Sbjct: 496 GIKSSTIHSFLYS----EAKDEFKESKERLIIVDEAGLVGSRQIAKIIKIAKKNNDKVVF 551 Query: 1097 SGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLE 1156 GD Q +AIA G F Q R A + + E +RQ E + V L Sbjct: 552 VGDVKQFKAIAAGDIFAEMQRRGA-ETITLGETLRQKTEFTKEVVRLTK----------- 599 Query: 1157 SVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDY 1216 + + + + + + LY+ IV DY Sbjct: 600 ---------------------------DQEFDQLFSLLLNSNKLLEEDKGELYQQIVNDY 632 Query: 1217 TGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRR 1276 E + LI+ NEDR+++N +I + + K + + + Sbjct: 633 F----EKKGDLLIIASKNEDRKIINQIIKKKNNNSNKSIKITINEMQSFSGINKFFAYSY 688 Query: 1277 LSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDT 1336 L+T + + KD+ + ++ + + ++ A+ + ++ Sbjct: 689 LNTTINIGKIPNFKNGEIVEVVDT-KDEHTLIVRTERREEKELDLKKY-ADDIVVFKKVE 746 Query: 1337 IRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDL 1396 G+++ FTK+ +E + + + D + L ++ + D Sbjct: 747 KEFVVGEKIVFTKNSKE--IKNGEIDYIKEIKEDGIILLKSGKSFYCHH-----YNYFDH 799 Query: 1397 AYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDA 1456 YAIT + AQG + L ++ +A F S Y ++R K+ +++YT N++ Sbjct: 800 GYAITDYKAQGVTARNVAILADSQ-----IASFNSFYTQVTRAKEDLKIYTQNKEELRAN 854 Query: 1457 INNAVQKGTAHDVFEPKPDREVMNAERLF 1485 ++ K + + + + NA F Sbjct: 855 VSKKAHKSSTLQYLKGEKNEHKRNAAGDF 883 >UniRef50_A3ZP08 Putative uncharacterized protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZP08_9PLAN Length = 697 Score = 351 bits (899), Expect = 2e-94, Method: Composition-based stats. Identities = 131/700 (18%), Positives = 264/700 (37%), Gaps = 90/700 (12%) Query: 807 RSGRDVRLYSSLDETR-----TAEKLARHPSFTVVSEQIKTRAGETSLE--TAISHQKSA 859 + + D T E+ ++ S + ++ ++R + + +++ Sbjct: 42 EQIAQEKGITDADRKAELGAETRERKGKNLSLAALQKEWRSRLTRDEQDWIAEVHRREAK 101 Query: 860 LHTPA---QQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGD 916 P+ + A+ A+ + L+TEA E+ + Sbjct: 102 PVRPSPGERSAVDHAVEHSFVRDAVVPERKLMTEALKRGLGAVTVDRTEQELKRR----- 156 Query: 917 LLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAA 976 + ++ + +R E I+ EG+ PL + + GQ+AA Sbjct: 157 --PLIRSQVDDRDMATTREMLALESKIVSFAREGRGRCRPLGDPKRPLTRDWFNEGQQAA 214 Query: 977 TRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM--R 1034 R +L + DR +++G AG GKTT + + A+ VV L + +A E+ + Sbjct: 215 VRHVLGSRDRVMMIRGVAGTGKTTLEQEIGEALAE----TGKPVVALAQSVKASREVLRQ 270 Query: 1035 SAGV-DAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGR 1093 AG +A T+A FL D ++Q + N + L+DE+S +G DM + + + R Sbjct: 271 EAGFAEADTVARFLKDAEMQASA------KNGVILVDEASQLGTRDMHAVFTVAESVNAR 324 Query: 1094 AVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALS 1153 + GD Q +++ G+P +L + R+ VA + EI+RQ + ++ L V A Sbjct: 325 VLLVGDRRQHKSVTAGEPLKLLEERAGLPVAEVTEILRQQGDYKKVAEHLSEGRVGPAFD 384 Query: 1154 GLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIV 1213 L+ + + + + S + +++ + + Sbjct: 385 ELDKLGWIRQVADDQRYQELASAYLAAINEQDRHGK------------------------ 420 Query: 1214 RDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGE 1273 R+ L+V+ + + + I +G L E+ V +A++ D + Sbjct: 421 ----------RKTALVVSPTHAEASRVTDAIRKSLHASGLLQ-EERTVTTYVSAHLTDAQ 469 Query: 1274 LRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYT 1333 + + +E D + N G +K L+ + P +A+ +Y Sbjct: 470 KQDATEYELG-DLIQFHQNA----PGFTKGTRLVVDET--------PPPTDLADRFEVYR 516 Query: 1334 PDTIRVGTGDRMRFTK----SDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQ 1389 + + GDR+R T D + +++TV + + G + Sbjct: 517 AKPLALAVGDRIRITAGGKTKDGKHRLSNGALFTVEGFT------AHGDLCVNNDWIIDH 570 Query: 1390 AEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDN 1449 H+ Y T+H +QGA+ +E + +AYVA++R K+ ++TD+ Sbjct: 571 DFGHLAHGYVTTSHASQGATVNKVFVAIDSESMK--ATDQRTAYVAVTRGKEQAVIFTDD 628 Query: 1450 RQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTAR 1489 A A + +A ++ EPKP+ + AE + R Sbjct: 629 HLDLLKAAARADKSLSAMELAEPKPETKPTPAEVFANRRR 668 Score = 229 bits (583), Expect = 1e-57, Method: Composition-based stats. Identities = 114/694 (16%), Positives = 232/694 (33%), Gaps = 103/694 (14%) Query: 203 KLKEQVEALGYETEVVGKHGMWEMPGVPVE---AFSGRSQTIREAVGEDASLKSRDVAAL 259 +L +++ LG+ V K +E+ G+P + FS R++ I + E + A L Sbjct: 2 RLANRLQELGFSV--VRKRDDFEIAGMPQDILGRFSRRTERIEQIAQEKGITDADRKAEL 59 Query: 260 --DTRKSK-QHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDV 316 +TR+ K +++ EW L RD D A++ P + Sbjct: 60 GAETRERKGKNLSLAALQKEWRSRL---------TRDEQDWIAEVHRREAKPVRPSPGE- 109 Query: 317 QQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDRE 376 + AV A+ R ++ + ++R + + + Sbjct: 110 RSAVDHAVEHSFVRDAVVPERKLMTEALKRG-LGAVTVDRTEQELKRR---PLIRSQVDD 165 Query: 377 KGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPR---TAGYSDAVSVLAQDRPSL 433 + + T+ + E + + +R+ + R P++ + R G AV + R + Sbjct: 166 RDMATTREMLALESKIVSFAREGRGRCRPLGDPKRPLTRDWFNEGQQAAVRHVLGSRDRV 225 Query: 434 AIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERL--SGELITGRR 491 ++ G G G+ E+ E G+ V +A ++ + + E + + Sbjct: 226 MMIRGVAG-TGKTTLEQEIGEALAETGKPVVALAQSVKASREVLRQEAGFAEADTVARFL 284 Query: 492 QLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTG---TGSALM 548 + E A ++VD+ +L ++ + A N +VL+ ++ G L Sbjct: 285 KDAEMQASAKNGVILVDEASQLGTRDMHAVFTVAESVNARVLLVGDRRQHKSVTAGEPLK 344 Query: 549 AMKD------AGVNTYRWQGGEQRPAT-------------------IISEPDRNVRYARL 583 +++ A V Q G+ + I + + RY L Sbjct: 345 LLEERAGLPVAEVTEILRQQGDYKKVAEHLSEGRVGPAFDELDKLGWIRQVADDQRYQEL 404 Query: 584 AGDFAASVKAGEE------SVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPV 637 A + A++ + ++ E + +T AIR L G+L E T+T Sbjct: 405 ASAYLAAINEQDRHGKRKTALVVSPTHAEASRVTDAIRKSLHASGLLQ-EERTVTTYVSA 463 Query: 638 WLDSRSRYLRDMYRPGMVMEQWN--PETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRI 695 L + Y G +++ P R V+D Sbjct: 464 HLTDAQKQDATEYELGDLIQFHQNAPGFTKGTRLVVDE------------------TPPP 505 Query: 696 SSLDSSWSLFRPEKMPVADGERLRVTG----KIPGLRVSGGDRLQVASVSEDAMTVVVPG 751 + L + ++R + + +A G+R+R+T K R+S G V + V Sbjct: 506 TDLADRFEVYRAKPLALAVGDRIRITAGGKTKDGKHRLSNGALFTVEGFTAHGDLCVNND 565 Query: 752 RAEPATLPVSDSPFTALKLENGWVETPGHSV-SDSATVFASVTQMAM----DNATLNGLA 806 L +G+V T S + VF ++ +M + Sbjct: 566 WIIDHDFG---------HLAHGYVTTSHASQGATVNKVFVAIDSESMKATDQRTAYVAVT 616 Query: 807 RSGRDVRLYSSLDET--RTAEKLARHPSFTVVSE 838 R +++ + A + + S ++E Sbjct: 617 RGKEQAVIFTDDHLDLLKAAARADKSLSAMELAE 650 >UniRef50_B6ASB0 Conjugal transfer protein, TraA n=6 Tax=Leptospirillum RepID=B6ASB0_9BACT Length = 976 Score = 349 bits (894), Expect = 7e-94, Method: Composition-based stats. Identities = 178/889 (20%), Positives = 348/889 (39%), Gaps = 128/889 (14%) Query: 1 MMSIA-----QVRSAGSAGNYYTDK----------DNYYVLGS--MGERWAGRGAEQLGL 43 M+SI + +Y + ++YY GS RW G A +LGL Sbjct: 1 MLSITVKKGQTAKDLAGVADYPDENRNKEKQVGAVEDYYSQGSEATPSRWLGGAAAELGL 60 Query: 44 QGSVDKDVFTRLLEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGD---K 100 G+V++D L+G P + + G +R R +DLTFSAPKSVS+ +G + + Sbjct: 61 SGAVNRDHLLATLQGFDPRTGEALVQKAGVDR-RYAFDLTFSAPKSVSIAWAVGTEEVKR 119 Query: 101 RLIDAHNQAVDFAVRQV-EALASTRVMTDGQ-SETVLTGNLVMALFNHDTSRDQEPQLHT 158 + DA ++AV+ + + E A R + + + T L+ A++ H +SR+ +PQ+H+ Sbjct: 120 GIEDAQDRAVERTLAFIEEKFALARRGSSKEGTITKEHVKLLSAVYRHGSSRELDPQIHS 179 Query: 159 HAVVANV-TQHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQV-EALGYETE 216 HA++ N+ + +G W L+ + ++ ++A G +YR +L ++ + LG+ E Sbjct: 180 HAMLQNMGLRADGTWGALNE---------KELFEWKLALGAVYRAELSSEISKNLGFGIE 230 Query: 217 VVGKHGMWEMPGVP---VEAFSGRSQTIREAVGEDA--SLKSRDVAALDTRKSKQHVDPE 271 ++ + +PG+P E FS R I +A+ E K+ +VAALDTRK K+ V+ E Sbjct: 231 ADREY--FRLPGIPKELEEEFSKRRVQIEKALKEKGLSGGKAAEVAALDTRKGKEVVEAE 288 Query: 272 IKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERK 331 I EW + E G + + R R S D P++ + +T A E+ Sbjct: 289 ILSEEWKKIAGEYGITAESLQGL---RGMERESNHDSFSLDRPELLRKLTTMEAVFQEKD 345 Query: 332 VQFTYTDVLARTVGILPPENGV-IERARAGIDEAISREQLIPLDREKG--LFTSGIHVLD 388 L R G+ +NG ++ +A + + +++ L + G +T+ + Sbjct: 346 --------LFRVAGVACSQNGRGLDDVKAEVAACLKDPEIVKLRGKDGEIYYTTQEMLAL 397 Query: 389 ELSVRALSRDIMKQNRVTVHPEKSVPRTAG------------YSDAVSVLAQDRPSLAIV 436 E +++++R + R V PE + A +A+ L + I+ Sbjct: 398 EQEIQSMARAGKEDARHVVFPEATKAGIARYEFEKGFKLSDEQHNAIEHLTTQAGRIRIL 457 Query: 437 SGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEG 496 G G AG+ + + G EV + + +++D + + + + L+G Sbjct: 458 EGHAG-AGKSTALVPVRYALEASGFEVIGASLQGKKAAGLQKDTGIRSQTLASLLRELQG 516 Query: 497 MA------------FTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR---T 541 + + V+VD+ + L+ + ++++ + Sbjct: 517 YEREDGEKVPPTRILSEKTVVVVDEAAMNDTRLMAGLIRETEKAGAKLILVGDESQVPPV 576 Query: 542 GTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQV 601 G+ +K + ++ + + R +R ++ ++A S+AQ Sbjct: 577 AAGNPFKTLKKE-LGYAELTENRRQRSDWQKDASREIRSGQVKEGLQKYLEANMISIAQ- 634 Query: 602 SGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSR-SRYLRDMYRPGMVMEQWN 660 ++ +AI+ T+ A S ++ S ++ L YR V E + Sbjct: 635 ----DRD---EAIK-------------KTVEAWSDHFVTSEPTKTLLTAYRREDVRELND 674 Query: 661 PETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRV 720 + +T T+RD +G + K GERL Sbjct: 675 RARAEMKTF--GSLTGPRVETTVRDREGNS----------------EGKREFQAGERLYF 716 Query: 721 TGKIPGLRVSGGDRLQVASV--SEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETP 778 L V G+ +A++ + D V + P +++ G+ T Sbjct: 717 KKNDRKLGVMNGETGTLANIDVTSDGKDCVFT-VKMDNGKEIRFDPRDYAQIDYGYAVTI 775 Query: 779 GHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRL-YSSLDETRTAEK 826 S ++ +++ NA L R ++ + + A+ Sbjct: 776 HKSQGETVDFSSNLVTGMGLNALYVQLTRHRDGTQIVLTEDQIDKMAQN 824 Score = 236 bits (601), Expect = 6e-60, Method: Composition-based stats. Identities = 116/642 (18%), Positives = 210/642 (32%), Gaps = 145/642 (22%) Query: 872 LPVVESKKLAFSMVDLLTEA-KSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGL 930 L + + + F DL A + + G G ++ E+ A +K +++ + G Sbjct: 331 LRKLTTMEAVFQEKDLFRVAGVACSQNGRGLDDVKAEVAACLKDPEIVKLRGKDGEI--Y 388 Query: 931 LVSRASYEAEKSILRHILEGKE---------AVMPLMERVPGELMEKLTSGQRAATRMIL 981 ++ E+ I GKE A + R E KL+ Q A + Sbjct: 389 YTTQEMLALEQEIQSMARAGKEDARHVVFPEATKAGIARYEFEKGFKLSDEQHNAIEHLT 448 Query: 982 ETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHR-AVGEMRSAGVDA 1040 + R +++G+AG GK+T V A+ E+ V+G + A G + G+ + Sbjct: 449 TQAGRIRILEGHAGAGKSTALVPVRYAL----EASGFEVIGASLQGKKAAGLQKDTGIRS 504 Query: 1041 QTLASFLHDTQLQQRSGETP------DFSNTLFLLDESSMVGNTDMARAYALIAAGGGRA 1094 QTLAS L + Q +R T+ ++DE++M MA G + Sbjct: 505 QTLASLLRELQGYEREDGEKVPPTRILSEKTVVVVDEAAMNDTRLMAGLIRETEKAGAKL 564 Query: 1095 VASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELRE-AVYSLINRDVERALS 1153 + GD Q+ +A G PF+ + A + E RQ + ++ A + + V+ L Sbjct: 565 ILVGDESQVPPVAAGNPFKTLKKELG--YAELTENRRQRSDWQKDASREIRSGQVKEGLQ 622 Query: 1154 GLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIV 1213 + + + + EA Sbjct: 623 KY----------------------------------LEANMISIAQDRDEAIKKTVEAWS 648 Query: 1214 RDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGE 1273 + P +TL+ + ED R LN + G L +V Sbjct: 649 DHFVTSEPT---KTLLTAYRREDVRELNDRARAEMKTFGSLTGPRVET------------ 693 Query: 1274 LRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYT 1333 T++D EGN+ Sbjct: 694 ----------------------------------TVRDREGNS----------------- 702 Query: 1334 PDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVS----GDSVTLSDGQQTREIRPGQEQ 1389 G+R+ F K+DR+ G + T+ + G + + + Sbjct: 703 EGKREFQAGERLYFKKNDRKLGVMNGETGTLANIDVTSDGKDCVFTVKMDNGKEIRFDPR 762 Query: 1390 AEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDN 1449 ID YA+T H +QG + F N G + YV L+R + Q+ Sbjct: 763 DYAQIDYGYAVTIHKSQGETVDF-------SSNLVTGMGLNALYVQLTRHRDGTQIV--- 812 Query: 1450 RQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTAREL 1491 T+ + + + + ++ DR + E+L + ++L Sbjct: 813 ---LTEDQIDKMAQNSGVEL--EPTDRMIDFTEQLLAKQQKL 849 >UniRef50_B6ALF3 Putative mobilization protein TraA n=1 Tax=Leptospirillum sp. Group II '5-way CG' RepID=B6ALF3_9BACT Length = 899 Score = 339 bits (868), Expect = 9e-91, Method: Composition-based stats. Identities = 179/897 (19%), Positives = 335/897 (37%), Gaps = 107/897 (11%) Query: 1 MMSIAQVRSAGSAGNYYT--------DKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVF 52 M+SI + SA YY + ++YY RW GRGA+ LGL G V K+ F Sbjct: 1 MLSIVTRGNGTSAQAYYEHLIEGRDREIEDYYAKREK-GRWLGRGADALGLSGPVRKEAF 59 Query: 53 TRLLEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDK---RLIDAHNQA 109 L G P +Q+ N HR G+DLTFSAPKSVS++ LG D+ R+ AH++A Sbjct: 60 RDLAFGFDPQTGKPL-VQNPGNNHRFGWDLTFSAPKSVSLVWALGDDETQKRIAAAHDRA 118 Query: 110 VDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHN 169 V+ A+ +E AS G E + +LV+A + H TSR+Q+PQLH+H V NV Sbjct: 119 VEAALSYMERHASFSRKGHGGQEEIRA-DLVVATYRHYTSREQDPQLHSHGFVFNV---- 173 Query: 170 GEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKH-GMWEMPG 228 + D +T + + ++A G YR L ++++ GY GK + E+ Sbjct: 174 ----AMGEDGKTRTLEGSHFFEWKMAGGAAYRVALAKELQEQGYTVLRDGKSFRLGEIDR 229 Query: 229 VPVEAFSGRSQTIREAVGEDA--SLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGF 286 + FS R + I ++ E K+ +VA L TRKSKQ DPE EW + Sbjct: 230 ELEDLFSTRRRQIEASLSERGVRGAKASEVATLTTRKSKQERDPEELRIEWRERAGRF-- 287 Query: 287 DIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGI 346 +R G D ++++ L++ + FT T AR + Sbjct: 288 ---LESGIFREREHALGQDLSRIIGHGLDSKKSLELLPESLTQERSTFTETQAHARILQE 344 Query: 347 LPPENGVIERARAGIDEAISREQLIPL--DREKGLFTSGIHVLDELSVRALSRDIMKQNR 404 L + A +D +SR +++PL + + +T E + + D+ K+ Sbjct: 345 LQ-GAEDLSVAERSVDAILSRPEVVPLVSNPGRDRYTILEMQRLEREMVETALDLGKRLN 403 Query: 405 VTVHP---EKSVPRTAGYSDAVSVLAQDRPSLAIVSGQG-GAAGQRERVAELVMMAREQG 460 V E+ + R+ ++ +++ ++V+ QG G+ + + + + G Sbjct: 404 HHVRQKSLEEVLSRSGLPTEQKTMVRSITHETSLVAVQGWAGTGKSTALKAALEIWEKNG 463 Query: 461 REVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGM---AFTPGSTVIVDQGEKLSLKE 517 V+ A ++ + + + + + + + + T ++VD+ + + Sbjct: 464 FRVRGAALSGKAALGLSEGSGIVSKTLAALEREIGEDGILPLTSHDILVVDEAGMVGSRT 523 Query: 518 TLTLLDGAARHNVQVLITDSGQRTG---TGSALMAMKD----AGVNTYRWQGGEQRPATI 570 +L ++++ ++ G+A A+ + + ++ R Q E+ I Sbjct: 524 MERILSKVHESGAKLVLVGDVRQLPAIEAGAAFRAILERVGSSELSHIRRQTLEEDRQAI 583 Query: 571 ISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVT 630 A ++ A + A SG + + +A+ +L +G + + V+ Sbjct: 584 ------RDLALGKAEKALENLSARDRIHAYDSGRLTKDGIGEAVSRDL-FEGKISIA-VS 635 Query: 631 MTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGET 690 T ++ +R ++ L D G Sbjct: 636 ATREEARDINEWARIHAQ-------------------------------AMGLSDKNGIQ 664 Query: 691 QVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVP 750 + ++ G+R+ T L V GD V + + + + Sbjct: 665 VATVHG------------ERELSRGDRILCTRNNRRLEVMNGDFGTVREIRNGHLRIELD 712 Query: 751 GRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSA---TVFASVTQMAMDNATLNGLAR 807 P L+ G+ T + ++A M+ +R Sbjct: 713 RGG-----FREVDPLVYSHLDYGYAATCHKLQGATVERCHIYAPENGMSGREWAYVAASR 767 Query: 808 SGRDVRLYSS-LDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTP 863 + ++ L A + + + + E L+ + + L T Sbjct: 768 ARESFYIHVERLTLRELAPAWSASRAKDTTLDYEGDKRHERGLQEDLRTSRRTLSTA 824 Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 106/607 (17%), Positives = 208/607 (34%), Gaps = 81/607 (13%) Query: 728 RVSGGDRLQVA---SVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSD 784 +++GG +VA + E TV+ G + L D L + Sbjct: 193 KMAGGAAYRVALAKELQEQGYTVLRDG--KSFRLGEIDRELEDL------------FSTR 238 Query: 785 SATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRA 844 + AS+++ + A + +A S + ++ E R Sbjct: 239 RRQIEASLSERGVRGAKASEVATLTTRK---SKQERDPEELRIEWRERAGRFLESGIFRE 295 Query: 845 GETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTEL 904 E +L +S +++++ L + ++ F+ + Sbjct: 296 REHALGQDLSRIIGH-GLDSKKSLELLPESLTQERSTFTETQAHARILQELQGAEDLSVA 354 Query: 905 GGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILE-GKEAVMPLMERVPG 963 ++A + R +++ + G E+ ++ L+ GK + ++ Sbjct: 355 ERSVDAILSRPEVV--PLVSNPGRDRYTILEMQRLEREMVETALDLGKRLNHHVRQKSLE 412 Query: 964 ELMEK--LTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVV 1021 E++ + L + Q+ R I VQG+AG GK+T +A + + E RV Sbjct: 413 EVLSRSGLPTEQKTMVRSI-THETSLVAVQGWAGTGKSTALKAALE----IWEKNGFRVR 467 Query: 1022 GLGPTHRAVGEMRS-AGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDM 1080 G + +A + +G+ ++TLA+ + G P S+ + ++DE+ MVG+ M Sbjct: 468 GAALSGKAALGLSEGSGIVSKTLAALEREIG---EDGILPLTSHDILVVDEAGMVGSRTM 524 Query: 1081 ARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQT-PELREA 1139 R + + G + V GD QL AI G FR R + + + I RQT E R+A Sbjct: 525 ERILSKVHESGAKLVLVGDVRQLPAIEAGAAFRAILERVGS--SELSHIRRQTLEEDRQA 582 Query: 1140 VYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGE 1199 + L E+AL L + Sbjct: 583 IRDLALGKAEKALENLSARDRIHAYD---------------------------------- 608 Query: 1200 AFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQV 1259 L + + + R + ++ V+ E+ R +N + G K + Sbjct: 609 -----SGRLTKDGIGEAVSRDLFEGKISIAVSATREEARDINEWARIHAQAMGLSDKNGI 663 Query: 1260 MVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLI 1319 V ++ R L T R L +++ + + I +G + ++ G R + Sbjct: 664 QVATVHGERELSRGDRILCTRNNRR--LEVMNGDFGTVREI--RNGHLRIELDRGGFREV 719 Query: 1320 SPREAVA 1326 P Sbjct: 720 DPLVYSH 726 Score = 91.8 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 41/174 (23%), Positives = 68/174 (39%), Gaps = 12/174 (6%) Query: 1324 AVAEGVTLYTPD-TIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLS-DGQQTR 1381 + G+ + T + GDR+ T+++R + TV + + + D R Sbjct: 658 SDKNGIQVATVHGERELSRGDRILCTRNNRRLEVMNGDFGTVREIRNGHLRIELDRGGFR 717 Query: 1382 EIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQ 1441 E+ P H+D YA T H QGA+ G M+G E AYVA SR ++ Sbjct: 718 EVDP---LVYSHLDYGYAATCHKLQGATVERCHIYAPENG----MSGREWAYVAASRARE 770 Query: 1442 HVQVYTDN--RQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRD 1493 ++ + + A + + K T D K + E L ++ R L Sbjct: 771 SFYIHVERLTLRELAPAWSASRAKDTTLDYEGDKRHERGLQ-EDLRTSRRTLST 823 >UniRef50_Q3HKI6 TraI n=2 Tax=Rhodobacteraceae RepID=Q3HKI6_RHOS4 Length = 1111 Score = 327 bits (839), Expect = 2e-87, Method: Composition-based stats. Identities = 134/602 (22%), Positives = 219/602 (36%), Gaps = 84/602 (13%) Query: 908 INAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGK---EAVMPLMERVPGE 964 I +R D + L A+ E+ +L + +P RV G Sbjct: 504 IERASERSDRSNGPQPQRETIRLYSDDATLALERMVLGEYRAARRQGGVELPARLRVTGG 563 Query: 965 LM-------------EKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNM 1011 + LT GQ+ A + L RF VQGYAG GKT + + Sbjct: 564 IKMSGEALLRDRLDKTTLTEGQKEAVALGLTGRGRFVGVQGYAGTGKTHM----VETLRR 619 Query: 1012 LPESERPRVVGLGPTHRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDE 1071 E V G PT++A E+ SA A T+A FL + D ++ ++DE Sbjct: 620 YAERAGFTVEGAAPTNKAAAELASAVPAAGTVARFL-------LADAPGDKKRSILVVDE 672 Query: 1072 SSMVGNTDMARAYALIAA-GGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIV 1130 + M+ DM R + GD QL ++ G PF Q ++ AIM +I Sbjct: 673 AGMISTRDMHALMTKANELRYARVILVGDVKQLDPVSAGSPFAQLQ-KAGMPTAIMADIQ 731 Query: 1131 RQTPEL-REAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAE 1189 RQ E R+AV I +V A S +E ++ Sbjct: 732 RQRNEDARKAVLHAIRGEVRAAFSRIEDLRT----------------------------- 762 Query: 1190 AQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVRE 1249 P+ + + R + G RE+T IV N R +N+ I D + Sbjct: 763 ------------PEKNQSFTGEVARAWLGLHSSVRERTGIVVLTNRVRGEVNAAIRDELK 810 Query: 1250 KAGELGKEQVMVPVLNTANIRDGELRRLSTWETH------RDALVLVDNVYHRIAGISKD 1303 + LG + V V L ++ E R ++++ R L + +R+ Sbjct: 811 REHRLGAQDVTVASLTPLSLTRAEAREAASYKAGDVVISVRSVEGLERDKLYRVTSTLPY 870 Query: 1304 DGLITLQDAEGNTR---LISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANS 1360 ITL+ G + A + + GD ++F +D++ G + + Sbjct: 871 QNSITLRPEGGGAEVALTLGHGSKAAGSLAAFEVGKREFAAGDEVKFAITDKDCGAINGA 930 Query: 1361 VWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTE 1420 +T V+ + ++ + P A + +D AYA TAH QGA+ I + Sbjct: 931 RGRITKVTEAQIDVTLHGGRKLSVPTDSLAARGLDHAYAATAHDFQGATVDRIIVGMTPD 990 Query: 1421 GNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAV-QKGTAHDVFEPKPDREVM 1479 + + +S YV +SR + HV + T + D I ++ A D + + E Sbjct: 991 ---EQLTSQKSFYVNISRARDHVTLVTTDPGKLADRIQRETGERPAALDAYAQRLSDERN 1047 Query: 1480 NA 1481 A Sbjct: 1048 AA 1049 Score = 269 bits (686), Expect = 1e-69, Method: Composition-based stats. Identities = 148/529 (27%), Positives = 232/529 (43%), Gaps = 66/529 (12%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSM----GERWAGRGAEQL------GLQGSVDKD 50 MMS++ V + +A YY + YYV GS W G A++L G VD Sbjct: 1 MMSVSNVSAGAAASGYY-QAEGYYVAGSPEAEAAASWFGSAADELVAMGQEEFAGRVDDA 59 Query: 51 VFTRLLEGRLP-----------DGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGD 99 F+ +L+G P +G L R+ DG +HRPG DLTFSA KSVS++ ++ GD Sbjct: 60 AFSAMLDGHAPPTQRDAEGHWKEGQTLGRVVDGERQHRPGIDLTFSASKSVSIIGLVAGD 119 Query: 100 KRLIDAHNQAVDFAVRQVE-ALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHT 158 +R+I AH++AV A+ VE TR +G+ V G +V LF HDTSR +PQLHT Sbjct: 120 ERVIAAHDEAVKAAMSYVEEKFVRTRREVNGEIVAVP-GKMVAGLFRHDTSRALDPQLHT 178 Query: 159 HAVVANVT-QHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEV 217 HAV+ N+ +G+W LS+ E +Y N++ G +YR +L + +E GY E Sbjct: 179 HAVIQNMVLGEDGKWTALSN---------EEIYRNKMLIGAIYRNELAQNLERAGYAVER 229 Query: 218 VGKHGMWEMPGVPVEA---FSGRSQTIREAVGEDA---SLKSRDVAALDTRKSKQH-VDP 270 VG G+ E+ GVP E FS R + I A+ E + +AAL TR++KQ +D Sbjct: 230 VGHDGITEIKGVPRELMDGFSKRRKEIEAALDERGIERTAVDSALAALATRRNKQKGIDR 289 Query: 271 EIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQ-------A 323 W + + G + R+ ++DG + A Sbjct: 290 AELREAWEKEAQSMGVSLDQLRELRQTATLTAATRLPGVTRDGIAAPSPADRAAAAVEFA 349 Query: 324 IAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSG 383 IA +SER ++ ++++ + ++ I + I +L+P+ Sbjct: 350 IAHVSERNAVYSGSELVRVALSR--AKDVGIRQIEGAIATKEETGRLVPV---------H 398 Query: 384 IHVLDEL-SVRALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGA 442 +H +E S A++R + D+ V + R V G G Sbjct: 399 VHAWNEKRSPDAMTRGEGFSGTLKAMGTAPYQNDPRNRDSFFVTIETRNGEQTVWGAGLQ 458 Query: 443 AGQRERVA---ELVMMAREQGREVQIIAADRR---SQMNMKQDERLSGE 485 A + A LV + + + V +I AD + + N+ E + Sbjct: 459 AALERQEASPGSLVHLTVQGQKPVTVIGADGKPVSAHRNLWTAEVIERA 507 Score = 173 bits (438), Expect = 6e-41, Method: Composition-based stats. Identities = 94/542 (17%), Positives = 171/542 (31%), Gaps = 64/542 (11%) Query: 353 VIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRV------- 405 E + + P L++ + E V R +Q V Sbjct: 500 TAEVIERASERSDRSNGPQPQRETIRLYSDDATLALERMVLGEYRAARRQGGVELPARLR 559 Query: 406 ------------TVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELV 453 T G +AV++ R V G G G+ V L Sbjct: 560 VTGGIKMSGEALLRDRLDKTTLTEGQKEAVALGLTGRGRFVGVQGYAG-TGKTHMVETLR 618 Query: 454 MMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGSTVIVDQGEKL 513 A G V+ A ++ + + R L + S ++VD+ + Sbjct: 619 RYAERAGFTVEGAAPTNKAAAEL--ASAVPAAGTVARFLLADAPGDKKRSILVVDEAGMI 676 Query: 514 SLKETLTLLDGAARHN-VQVLITDSGQR---TGTGSALMAMKDAGVNT-----YRWQGGE 564 S ++ L+ A +V++ ++ GS ++ AG+ T + Q E Sbjct: 677 STRDMHALMTKANELRYARVILVGDVKQLDPVSAGSPFAQLQKAGMPTAIMADIQRQRNE 736 Query: 565 QRPATIISEPDRNVRYA------------------RLAGDFAASVKAGEESV-AQVSGVR 605 ++ VR A +A + + E V R Sbjct: 737 DARKAVLHAIRGEVRAAFSRIEDLRTPEKNQSFTGEVARAWLGLHSSVRERTGIVVLTNR 796 Query: 606 EQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWN--PET 663 + + AIR ELK + LG +VT+ +L+P+ L Y+ G V+ Sbjct: 797 VRGEVNAAIRDELKREHRLGAQDVTVASLTPLSLTRAEAREAASYKAGDVVISVRSVEGL 856 Query: 664 RSHDRYVIDRVTAQSHSLTLRDAQGETQVVRI----SSLDSSWSLFRPEKMPVADGERLR 719 Y + +S+TLR G +V S S + F K A G+ ++ Sbjct: 857 ERDKLYRVTSTLPYQNSITLRPEGGGAEVALTLGHGSKAAGSLAAFEVGKREFAAGDEVK 916 Query: 720 VTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETP- 778 G R ++ V+E + V + G + L V A L++ + T Sbjct: 917 FAITDKDCGAINGARGRITKVTEAQIDVTLHGGRK---LSVPTDSLAARGLDHAYAATAH 973 Query: 779 ---GHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTV 835 G +V Q+ + ++R+ V L ++ + A+++ R Sbjct: 974 DFQGATVDRIIVGMTPDEQLTSQKSFYVNISRARDHVTLVTTDP-GKLADRIQRETGERP 1032 Query: 836 VS 837 + Sbjct: 1033 AA 1034 >UniRef50_B1ZQ33 Conjugative relaxase domain protein n=2 Tax=Opitutus terrae PB90-1 RepID=B1ZQ33_OPITP Length = 907 Score = 316 bits (810), Expect = 4e-84, Method: Composition-based stats. Identities = 182/942 (19%), Positives = 349/942 (37%), Gaps = 90/942 (9%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGS--MGERWAGRGAEQLGLQGSVDKDVFTRLLEG 58 M+++ +R+ + + + K++Y+ G + W G+GA+ LGL+G V VF L Sbjct: 1 MITVGVIRNGATYLSRHLCKNDYWTEGEKRIEGEWIGKGAKALGLEGGVQTKVFDALRRN 60 Query: 59 RLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVE 118 R P+ + ++ +R +D+ SAPK VS++AMLGGD+R++ A + +V A+ ++E Sbjct: 61 RHPETGEQLTAREDKDR-VAFFDVQLSAPKDVSVLAMLGGDQRIVAAFHDSVKIALEEME 119 Query: 119 ALASTRVMTDGQSETVL---TGNLVMALFNHDTSRDQEPQLHTHAVVANVT--QHNGEWK 173 A+ R + TGN ALF HDTSRD +PQLH HAV++N T GEW Sbjct: 120 RFAAVRERRGESRSSEDFRLTGNFAGALFFHDTSRDLDPQLHAHAVLSNATWDAERGEWF 179 Query: 174 TLSS-DKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP-- 230 L + + +G++ V LYR +L ++ LGYET + G + + GV Sbjct: 180 ALQPAEMLRASGYLRQV---------LYR-ELAGRLRELGYETYGMNSTG-FSVRGVEHL 228 Query: 231 VEAFSGRSQTIREAVGEDASLKSR-------DVAALDTRKSKQH--VDPEIKMAEWMQTL 281 E FS R++ I++ E A K R +V ++R +K E++ + + Sbjct: 229 RERFSKRTRHIQQLAEEFAQKKGRKPTKREVEVLVRESRANKLPNVSTREVRARQRAELN 288 Query: 282 KETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLA 341 + + A +A + ++ G V + A+ + ER +VL Sbjct: 289 PDEAAALADLVRTARAKAPGQRISHG-------QVVTVLEAALRHVFERSSVVREGEVLN 341 Query: 342 RTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMK 401 + + P + E A + + + E + IH + ++R + Sbjct: 342 AALELHPDFSRWRELREA------LQGRTDAIRSEGEMSLRPIHREETATIRRVVEGRNT 395 Query: 402 QNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGR 461 + + T G A L ++ L+++ G G G+ + + R G Sbjct: 396 RFPLGDATLLPERLTRGQLAAARALLANKDFLSVLVGDAG-TGKTTVLTAIQDAHRAAGG 454 Query: 462 E-VQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLT 520 + + R++ + + + A ++VD+ LS ++ Sbjct: 455 QPFLPLTPTTRAREALVDAGFERADTVQRFLVSETLQAEAVRRVLLVDEAGLLSTEQLDR 514 Query: 521 LLDGAARHNVQVLITDSGQRTGT---GSALMAMKDAGVNTYRWQGGE------------- 564 L A +VL+ ++ + G A+ + Sbjct: 515 LTRIAQERRARVLLVGDTKQHYSVQRGDAMRNVIRNSGTPVVRLSEVLRQREEKDRHFSR 574 Query: 565 --------------QRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAIL 610 +R + D + A +A +V G E++ + + Sbjct: 575 LLAAGNVSDALLYAERRGMMRELGDDETLFTSAAEHYAENVAKGTETLVVIPFWEDIDRF 634 Query: 611 TQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPET--RSHDR 668 + R+ L+ +G+LG EV A+ P+ + D YR G + + Sbjct: 635 SVHARTALRRRGLLGDAEVVREAVRPLTWTEEQKAHWDQYRVGDRLLFVRDTRFFKRGSA 694 Query: 669 YVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLR 728 V+ ++ + + + E S+ + R + +PVA G+RL + G+ Sbjct: 695 AVVKKILPDGLHV---EGENERYAKITRKQRGSFDVGRAQMLPVAAGDRLLMRGREEEQG 751 Query: 729 VSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATV 788 + GD VA+V A V + E + F A + + ++ Sbjct: 752 FANGDFRDVAAVDPIANRVFLSDGKEL------PADFRAWTYGHALTSYRSQGSTAEESL 805 Query: 789 FA---SVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAG 845 Q M G R +Y S + P + +E ++ Sbjct: 806 LVLGEVAEQALMRRQFYVGNTRYRGAHHIYVSHRDAIITRLARPDPGRQLATEFVRRHRI 865 Query: 846 ETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDL 887 + A+ + +A E++++ +++ Sbjct: 866 FPAERIAMGRLHRMGARMRDAWLSIAARWQETREVVREKMEI 907 Score = 236 bits (602), Expect = 6e-60, Method: Composition-based stats. Identities = 128/695 (18%), Positives = 221/695 (31%), Gaps = 95/695 (13%) Query: 820 ETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKK 879 E R ++ +P + A + ISH + A AL V + Sbjct: 278 EVRARQRAELNPDEAAALADLVRTARAKAPGQRISHGQVVTVLEA------ALRHVFERS 331 Query: 880 LAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEA 939 ++L A + + + EL + + G + R + Sbjct: 332 SVVREGEVLNAALELHPDFSRWRELREALQGR----------TDAIRSEGEMSLRPIHRE 381 Query: 940 EKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKT 999 E + +R ++EG+ PL + L E+LT GQ AA R +L D +V+ G AG GKT Sbjct: 382 ETATIRRVVEGRNTRFPLGDAT--LLPERLTRGQLAAARALLANKDFLSVLVGDAGTGKT 439 Query: 1000 TQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVD-AQTLASFLHDTQLQQRSGE 1058 T A+ A + L PT RA + AG + A T+ FL LQ + Sbjct: 440 TVLTAIQDAHRAAG---GQPFLPLTPTTRAREALVDAGFERADTVQRFLVSETLQAEA-- 494 Query: 1059 TPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTR 1118 + L+DE+ ++ + R + R + GDT Q ++ G R Sbjct: 495 ----VRRVLLVDEAGLLSTEQLDRLTRIAQERRARVLLVGDTKQHYSVQRGDAMRNVIRN 550 Query: 1119 SAADVAIMKEIVRQTPE-LREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVT 1177 S V + E++RQ E R L +V AL Sbjct: 551 SGTPVVRLSEVLRQREEKDRHFSRLLAAGNVSDAL------------------------- 585 Query: 1178 EFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDR 1237 A +G ++ +TL+V ED Sbjct: 586 --------------LYAERRGMMRELGDDETLFTSAAEHYAENVAKGTETLVVIPFWEDI 631 Query: 1238 RVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETH------RDALVLVD 1291 + + G LG +V+ + + + + RD Sbjct: 632 DRFSVHARTALRRRGLLGDAEVVREAVRPLTWTEEQKAHWDQYRVGDRLLFVRDTRFFKR 691 Query: 1292 NVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSD 1351 + I D + ++ + + V GDR+ + Sbjct: 692 GSAAVVKKILPDGLHVEGENERYAKIT----RKQRGSFDVGRAQMLPVAAGDRLLMRGRE 747 Query: 1352 RERGYVANSVWTVTAVSG--DSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGAS 1409 E+G+ V AV + V LSDG++ + +A+T++ +QG++ Sbjct: 748 EEQGFANGDFRDVAAVDPIANRVFLSDGKEL-------PADFRAWTYGHALTSYRSQGST 800 Query: 1410 ETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQ-KGTAHD 1468 ++ + G + LM YV +R + +Y +R + + A + Sbjct: 801 AEESLLVLGEVAEQALM--RRQFYVGNTRYRGAHHIYVSHRDAIITRLARPDPGRQLATE 858 Query: 1469 VFEPKPDREVMNAERLFSTARELRDVAAGR-AVLR 1502 R + + R R A R A L Sbjct: 859 FVR----RHRIFPAERIAMGRLHRMGARMRDAWLS 889 >UniRef50_UPI00016C53CF TrwC protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C53CF Length = 818 Score = 295 bits (756), Expect = 7e-78, Method: Composition-based stats. Identities = 115/542 (21%), Positives = 203/542 (37%), Gaps = 78/542 (14%) Query: 964 ELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGL 1023 + KL+ Q + R + + DR +++G AG GKT + + ++ VV L Sbjct: 330 HVSSKLSPEQASIARHVWNSPDRVILIRGAAGTGKTHTMKTTFAGIDR-------PVVVL 382 Query: 1024 GPTHRAV-GEMRSAGVD-AQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMA 1081 P+ A G +R G A T+A FL D + Q ++ N + +DE+ ++G Sbjct: 383 APSADASRGVLRKEGFTNADTVARFLIDQEFQHKA------KNGVIWVDEAGLLGMRQTR 436 Query: 1082 RAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVY 1141 + + L R V GD Q +I G R+ + + VA + +I RQ +EAV Sbjct: 437 QVFDLAEKLNARVVLQGDKQQHGSIERGTTLRVLEQFAGLPVAQLTDIRRQKGRYKEAVT 496 Query: 1142 SLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAF 1201 +L + L + + S + L + +A+ A Sbjct: 497 ALSKGKMLAGYDTLNDLGWVK-----------------STTGNTPLVDEYMEAIDTKRAD 539 Query: 1202 PDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMV 1261 D+ ++ L + + + + I ++ G + KE+ + Sbjct: 540 QDIT-------------------DRVLAIAPTHAEAAEVTDAIRLRLQERGIVAKEEHEI 580 Query: 1262 PVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISP 1321 L + + E LS +E YHR G K + + D + RL Sbjct: 581 QTLVPLHWTEAERGDLSRYEGTEVV------QYHRNGGTQKAGQRVAIADFKPGMRL--- 631 Query: 1322 REAVAEGVTLYTPDTIRVGTGDRMRFTK----SDRERGYVANSVWTVTAVSGDSVTLSDG 1377 A ++Y +TI++ GDR+R T +D + +++ V + + Sbjct: 632 --GPASTFSVYGKNTIKLAAGDRIRITAPGKSADTKHKLDNGTLYEVKGFDEKGGIVLNN 689 Query: 1378 QQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALS 1437 T H+ Y T+H +QG + + G E + A E YV++S Sbjct: 690 DWTL------APDFAHLTHGYVTTSHASQGKTVDKVLIAMGQESLPAISA--EQFYVSVS 741 Query: 1438 RMKQHVQVYTD-NRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAA 1496 R + ++TD +AI A + +A ++F P P R M A + ARE Sbjct: 742 RGRDKATIFTDVPTPELREAIQKADTRKSATELFNPLP-RNRMYA--ILKRAREAFQALR 798 Query: 1497 GR 1498 R Sbjct: 799 TR 800 Score = 213 bits (542), Expect = 5e-53, Method: Composition-based stats. Identities = 126/817 (15%), Positives = 243/817 (29%), Gaps = 149/817 (18%) Query: 139 LVMALFNHDTSRDQ------EPQLHTHAVVANVTQH--NGEWKTLSSDKVGKTGFIENVY 190 +V H +R + LH H V N T G+WK ++ K Sbjct: 1 MVAYAVTHRDTRINADDSMPDMNLHKHCFVFNATYDADEGKWKAAEVGQLKK-------- 52 Query: 191 ANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVEA---FSGRSQTIREAVGE 247 + + +Y +L V+ LGY E GK +E+ G+ E FS R Q I + Sbjct: 53 -DAPYYEAIYANRLAANVKDLGYGIERRGK--SFEITGISQELRDKFSRRKQYIDMVAKK 109 Query: 248 DA--SLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETG------FDIRAYRDAADQRA 299 + +SR TR K + + L + + R + A Sbjct: 110 LGITNPESRAKLGATTRLQKSKELADDLQPYYSSRLAPQEKQQLASLEGKLSRATTTEAA 169 Query: 300 DLRTLTPGPASQDGPDVQQAVTQAIAGL-----------SERKVQFTYTDVLARTVGILP 348 + Q + ++ AI ++ + A T G+L Sbjct: 170 VAFAIGHMFERQSVVNEKRLYETAIRHGIGWVTPEEVQQEAKRQGLLVRNGEATTRGVLA 229 Query: 349 PENGVIERARAGIDEAISREQLIPLD--------------------REKGLFTSGIHVLD 388 E+ VI AR G LD G + VLD Sbjct: 230 EESRVIAFARDGKGTCRPMGAATRLDESPNNTRIMVGMQGPGRGDPGHTGADVAIPAVLD 289 Query: 389 E---------LSVRALSRDIMKQNRVTVHPEK----------SVPRTAGYSDAVSVLAQD 429 + R + T+ PE+ S + + + Sbjct: 290 QQQKGRPDESKRPMPALRQGFISDTATLSPEQQAGFDKDIHVSSKLSPEQASIARHVWNS 349 Query: 430 RPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITG 489 + ++ G G G+ + R V ++A + + + E + Sbjct: 350 PDRVILIRGAAG-TGKTHTMKTTFAGID---RPVVVLAPSADASRGVLRKEGFTNADTVA 405 Query: 490 RRQLLEGMAFT-PGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGT---GS 545 R + + + VD+ L +++T + D A + N +V++ Q+ G+ G+ Sbjct: 406 RFLIDQEFQHKAKNGVIWVDEAGLLGMRQTRQVFDLAEKLNARVVLQGDKQQHGSIERGT 465 Query: 546 ALMAMKD------AGVNTYRWQGGEQRPATIISEPDR----------------NVRYARL 583 L ++ A + R Q G + A + L Sbjct: 466 TLRVLEQFAGLPVAQLTDIRRQKGRYKEAVTALSKGKMLAGYDTLNDLGWVKSTTGNTPL 525 Query: 584 AGDFAASVKAGE-------ESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSP 636 ++ ++ +A E A +T AIR L+ +G++ E + L P Sbjct: 526 VDEYMEAIDTKRADQDITDRVLAIAPTHAEAAEVTDAIRLRLQERGIVAKEEHEIQTLVP 585 Query: 637 VWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRIS 696 + R Y V++ + + Sbjct: 586 LHWTEAERGDLSRYEGTEVVQYHRNGGTQKAGQRVAIADFKPGMRL-------------- 631 Query: 697 SLDSSWSLFRPEKMPVADGERLRVTGKIPG----LRVSGGDRLQVASVSEDAMTVVVPGR 752 S++S++ + +A G+R+R+T ++ G +V E V+ Sbjct: 632 GPASTFSVYGKNTIKLAAGDRIRITAPGKSADTKHKLDNGTLYEVKGFDEKGGIVLNND- 690 Query: 753 AEPATLPVSDSPFTALKLENGWVETPGHSVSDSA-TVFASVTQMAM----DNATLNGLAR 807 TL + L +G+V T S + V ++ Q ++ ++R Sbjct: 691 ---WTLAPDFA-----HLTHGYVTTSHASQGKTVDKVLIAMGQESLPAISAEQFYVSVSR 742 Query: 808 SGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRA 844 +++ + E + + + +E Sbjct: 743 GRDKATIFTDVPTPELREAIQKADTRKSATELFNPLP 779 Score = 51.8 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 19/119 (15%), Positives = 36/119 (30%), Gaps = 11/119 (9%) Query: 839 QIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEG 898 A + + A K + T + A+ A+ + ++ + L A Sbjct: 141 YSSRLAPQEKQQLASLEGKLSRATTTEAAVAFAIGHMFERQSVVNEKRLYETAIRHGIGW 200 Query: 899 TGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPL 957 E+ E Q G L+ G +R E ++ +GK P+ Sbjct: 201 VTPEEVQQEAKRQ---GLLVR--------NGEATTRGVLAEESRVIAFARDGKGTCRPM 248 >UniRef50_C6DZ94 Conjugative relaxase domain protein n=1 Tax=Geobacter sp. M21 RepID=C6DZ94_GEOSM Length = 1351 Score = 294 bits (751), Expect = 3e-77, Method: Composition-based stats. Identities = 183/987 (18%), Positives = 321/987 (32%), Gaps = 203/987 (20%) Query: 1 MMSIAQVR-SAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGR 59 M+S++ +A AG Y+ +D YY+ G RW G+ +L L G V ++ F L G+ Sbjct: 1 MLSLSNGGMTASQAGKYFAAED-YYLKGGESSRWLGKTTAELKLAGKVGEEEFRNLCAGK 59 Query: 60 LPDGAD-------LSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDF 112 PDGA + + + HR G DLTFSAPKS+S+ G+ L + +QAV+ Sbjct: 60 TPDGAAQLVAPKVVRKEGEPQELHRAGNDLTFSAPKSLSIGYA-AGNHELKEIWDQAVEN 118 Query: 113 AVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ-HNGE 171 +R VE S G GNL+ A F+H TSR +P +H+H + N+ +G Sbjct: 119 TMRYVEEHYSQYRTPHGIR---NAGNLLAAKFDHVTSRALDPDVHSHVFLLNMVHTPDGR 175 Query: 172 WKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHG-MWEMPGVP 230 W +++Y ++I+ G L R++ + GY+ + ++E+ GV Sbjct: 176 WLA---------NEPKSIYQDKISIGMLARQESICLLRQAGYQVYFTDREKFLFEIEGVS 226 Query: 231 ---VEAFSGRSQTIREAVGE---------DASLKSRDVAALDTRKSKQHVDPEIKMAEWM 278 +E FS R I E V E + + AA TR K + + +W Sbjct: 227 PEEIEFFSKRGAAIEEQVAEWQQEGKYPGVSETLLKQWAAFGTRDHKLKITIQEIRQKWD 286 Query: 279 QTLKETGFDIRAYRDAADQ--------------RADLRTLTPGPASQDGPDVQQAVTQAI 324 Q E G + R+ + + + + LTP + ++ + A Sbjct: 287 QWFVEVGGTAQEVRERIEATKQLGQEADAGNSGKTESQPLTPTHSFPPEKTAREVLKDAS 346 Query: 325 AGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDR----EKGLF 380 + L++++V F ++ V I E+ I + + E L R + F Sbjct: 347 SFLTDKEVIFDRAQLIKTAVRISGGEH-DIRQIENALKEKREVHFLGQEPRGPQAGREFF 405 Query: 381 TSGIHVLDE-LSVRALS------------------------------------RDIMKQN 403 T+ + E +V AL + + Sbjct: 406 TTREMLKLEARNVEALEYLGAFAPVTSNSEVEAYLKGLAGAGEGTLTREEASFTEAFEAG 465 Query: 404 RVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELV----MMAREQ 459 + P + T G + V + G G G+ + + + Sbjct: 466 AASAAPTGFLNLTPGQREYVLNELAGDKGFTVTQGDPG-TGKTFAAGVVERFNDEVLQPS 524 Query: 460 GREVQI--IAADRRSQMNMKQDERLSGELITGRRQL------------LEGMAFTPGSTV 505 GR +A ++ + M+Q + +E A Sbjct: 525 GRAHHTLNLAYTGKAALEMEQASGKEAFTVDSFLNRYRKSPDLSAFPGMERPAPRGAQVA 584 Query: 506 I-VDQGEKLSLKETLTLLDGAARHNVQVL------ITDSGQRTGTGSA------------ 546 + +D+ + ++ LL + + I D+ Q ++ Sbjct: 585 LKLDEASFVGGRQAEHLLRVVQDLKSKGVQVKLSMIGDTKQLQSIQASPFFSHASELARQ 644 Query: 547 ----LMAM------KDAGV----------NTYRWQGGEQRPATIISEPDRNVR------- 579 M KDAG+ R G A + E VR Sbjct: 645 ELGDFALMKEITRQKDAGLLDVAESLNLEGEQRLLGKNATDALKLLEQQGRVREIPTYDA 704 Query: 580 -YARLAGDF------------AASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGL 626 + AA+ + + ++ L IR+ +G LG Sbjct: 705 LMQAAVECYVEEAAKPSRDPAAAAAGEKQSVLIVTPLNADRQELNAKIRATKMEKGELG- 763 Query: 627 PEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLR-- 684 V + PV Y PGM + + V + V L Sbjct: 764 QGVAVQVYVPV----EQGVTASSYHPGMNIVFTGKRAKDGAMEVPEGVALNQQGEVLSVD 819 Query: 685 ------------DAQG-ETQVVRISSLDSSWSLFRPEKMPVADGERL--------RVT-- 721 D G T+ S L + +L+R E+ A G+ + R T Sbjct: 820 PVRNRVAVVFQGDRGGTTTKTFEASGLANKSALYRVEEREFAAGDIVVCNKTTFDRSTVS 879 Query: 722 -GKIPGLRVSGGDRLQVASVSEDAMTVVVPGR-AEPATLPVSDSPFTALKLENGWVETPG 779 +++ G+R + ++ V R + V+ F +E+G+ T Sbjct: 880 ARSGKTIKLRNGERGVIEAMEAAEKGSVALIRFPGDRVVKVNLDRFGPQHIEHGYAVTAH 939 Query: 780 HSVSDSATVFASVTQ-MAMDNATLNGL 805 + ++ S N L Sbjct: 940 KAEGETVDSVISFNYVRPASQNHGNAL 966 Score = 213 bits (543), Expect = 4e-53, Method: Composition-based stats. Identities = 127/674 (18%), Positives = 206/674 (30%), Gaps = 100/674 (14%) Query: 844 AGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTE 903 +G+T + A++ + A + K++ F L+ A + + Sbjct: 318 SGKTESQPLTPTHSFPPEKTAREVLKDASSFLTDKEVIFDRAQLIKTAVRISGGEHDIRQ 377 Query: 904 LGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAE-------------------KSIL 944 + + + + L G +R + E + Sbjct: 378 IENALKEKREVHFLGQEPRGPQAGREFFTTREMLKLEARNVEALEYLGAFAPVTSNSEVE 437 Query: 945 RHILEGKEAVMPLMERVPGELME---------------KLTSGQRAATRMILETSDRFTV 989 ++ A + R E LT GQR L FTV Sbjct: 438 AYLKGLAGAGEGTLTREEASFTEAFEAGAASAAPTGFLNLTPGQREYVLNELAGDKGFTV 497 Query: 990 VQGYAGVGKTTQFRAVMSAVNMLPESER--PRVVGLGPTHRAVGEMRSA-GVDAQTLASF 1046 QG G GKT V + + + + L T +A EM A G +A T+ SF Sbjct: 498 TQGDPGTGKTFAAGVVERFNDEVLQPSGRAHHTLNLAYTGKAALEMEQASGKEAFTVDSF 557 Query: 1047 LHDTQ-------LQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAA-----GGGRA 1094 L+ + P + LDE+S VG ++ + Sbjct: 558 LNRYRKSPDLSAFPGMERPAPRGAQVALKLDEASFVGGRQAEHLLRVVQDLKSKGVQVKL 617 Query: 1095 VASGDTDQLQAIAPGQPF----RLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVER 1150 GDT QLQ+I PF + D A+MKEI RQ V +N + E+ Sbjct: 618 SMIGDTKQLQSIQA-SPFFSHASELARQELGDFALMKEITRQKDAGLLDVAESLNLEGEQ 676 Query: 1151 ALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYE 1210 L G + ++ Q+G V E L +A + ++ A P Sbjct: 677 RLLGKNATDALKLLEQQG------RVREIPTYDA--LMQAAVECYVEEAAKPS------- 721 Query: 1211 AIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKE---QVMVPVLNTA 1267 RD ++ LIVT LN DR+ LN+ I + + GELG+ QV VPV Sbjct: 722 ---RDPAAAAAGEKQSVLIVTPLNADRQELNAKIRATKMEKGELGQGVAVQVYVPVEQGV 778 Query: 1268 NIRD----------GELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTR 1317 G+ + E + + + ++ D G T Sbjct: 779 TASSYHPGMNIVFTGKRAKDGAMEVPEGVALNQQGEVLSVDPVRNRVAVVFQGDRGGTTT 838 Query: 1318 LISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRER-----------GYVANSVWTVTA 1366 +A LY + GD + K+ +R + A Sbjct: 839 KTFEASGLANKSALYRVEEREFAAGDIVVCNKTTFDRSTVSARSGKTIKLRNGERGVIEA 898 Query: 1367 VS----GDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGN 1422 + G + QHI+ YA+TAH A+G + I+ Sbjct: 899 MEAAEKGSVALIRFPGDRVVKVNLDRFGPQHIEHGYAVTAHKAEGETVDSVISFNYVRPA 958 Query: 1423 RKLMAGFESAYVAL 1436 + + Sbjct: 959 SQNHGNALQTLTGI 972 >UniRef50_B3DCU7 Relaxase n=2 Tax=Burkholderia multivorans ATCC 17616 RepID=B3DCU7_BURM1 Length = 1156 Score = 287 bits (733), Expect = 4e-75, Method: Composition-based stats. Identities = 137/564 (24%), Positives = 230/564 (40%), Gaps = 87/564 (15%) Query: 1 MMSIAQVRSAGSAGNYYTD---------KDNYYVLGSMGERWAGRGAEQLGLQGS-VDKD 50 M+S +RS A Y+ DNYYV W GRGA+ LG++G V K+ Sbjct: 1 MISKEPIRSVADAARYHDKSFNKDAGKKADNYYVNEKATAHWQGRGADFLGIRGKAVTKE 60 Query: 51 VFTRLLEGR--LPDGADLSRMQD--GSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAH 106 F + L GR PD + + + ++ R G D T + PKSVS+ A++G D R+I AH Sbjct: 61 EFIQFLSGRMPHPDTGKIQNLANNSKGDKRRAGIDFTIAPPKSVSIAALVGKDDRVIAAH 120 Query: 107 NQAVDFAVRQVEALASTRVMTD--GQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVAN 164 A + E AS + D G++ + GNL+ A H+T+R+ EPQLH H V+ + Sbjct: 121 LAANARTMEWFEKHASLIRVKDEKGRNRPEVAGNLLYATVLHETNRENEPQLHNHNVIVS 180 Query: 165 VTQHNGE--WKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHG 222 W++L++D +Y + +Y+ +L + LGY+ Sbjct: 181 AVYDGARHSWRSLTNDL---------LYTLRARGDIIYKAELAAALRHLGYQLVYAENGI 231 Query: 223 MWEMPGVP---VEAFSGRSQTIREAVGED------ASLKSRDVAALDTRKSKQHVDPEIK 273 +E+ G V+ FS R+ +REA+ + AS +R VA LD+R +KQ EI Sbjct: 232 DFELKGFSRDHVDTFSTRAVQVREALLKHGIDPGEASFDARRVAKLDSRAAKQEHPREIL 291 Query: 274 MAEWMQTLKETGFDIRAYRDAADQ---------RADLRTLTPGPA--------------- 309 + W +T KE D+ + + A + R RT+ G A Sbjct: 292 QSVWEETAKEANLDVASIVERAREAFADRQVPRRGVERTVEHGAAMGQDSGPSRGAAVSV 351 Query: 310 -SQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISRE 368 + + +AV+ AI L+ER+ FT D+ + G I ID+ + Sbjct: 352 SNDARANALRAVSWAIEHLTEREQAFTLVDLEVTALK---FSRGSISEIEWAIDQHVRNH 408 Query: 369 QLIP---LDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPE--------------- 410 L+ + +T+ + +EL + Q V + E Sbjct: 409 MLVDRGITVGGQIQYTTHKAIDNELKLAEHILAGRGQGNVVLDAEDQFDAAVAAFEAKKT 468 Query: 411 ----KSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQII 466 + + A + S+ + G+ G G+ +A + +A+ G EV + Sbjct: 469 AEIGEQFKLSGEQIQAARNVLMHEDSIQGIQGEAG-TGKTAALAMVKDVAQAMGWEVIGV 527 Query: 467 AADRRSQMNMKQDERLSGELITGR 490 A + ++ + + + G Sbjct: 528 ATSAAAAKELEASSGIQSDTVAGY 551 Score = 196 bits (499), Expect = 5e-48, Method: Composition-based stats. Identities = 93/481 (19%), Positives = 174/481 (36%), Gaps = 63/481 (13%) Query: 1055 RSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRL 1114 R D TL ++DESS+ G D + G R V GD Q ++A G+ F Sbjct: 718 RRYGNVDGKKTLIVMDESSLTGVDDTEKLLRFAREIGARTVLQGDVKQHGSVAAGRAFEQ 777 Query: 1115 QQTRSAADVAIMKEIVR---QTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWA 1171 Q + +V+I++E R T + R+A+ + + +A++ L++++ ++ Sbjct: 778 AQI-AGMNVSILEETRRFRDATAQTRQALADMKAGNYAQAIARLDTLRVAE--------- 827 Query: 1172 PEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVT 1231 ++ + + + E Q+ KG P V +V Sbjct: 828 -----SDLAKTVAERYLENLQELTAKGVDAPKVG-----------------------VVA 859 Query: 1232 HLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVD 1291 N DR+++N+ +H G + P L+ + E R S +R ++ Sbjct: 860 ITNSDRKLINAAVHQALTDVGIISGPHFEKPHLDDPKMTGAEQRYASMLSRNRVDALIYR 919 Query: 1292 NVYH----------RIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGT 1341 Y + G I +A+G + I+P+ + ++ Sbjct: 920 KSYREIGVEKGDVLTVTGYDVQKNRIYALNAKGKSVEINPQRQDYFSPAI--QESRVFAV 977 Query: 1342 GDR------MRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHID 1395 GDR +R + R + + A+ + + +E + + +D Sbjct: 978 GDRVETRAIIRLPGQELNR-LDNGTQGVIVAIDSLGAKIRWYRDGKESDLKNDD-LRFVD 1035 Query: 1396 LAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTD 1455 AYA T++ QGA+ I G R + E+AYVA SR K + ++ T + Sbjct: 1036 HAYAHTSYKEQGATNHREIVAVSKIGAR--VFNREAAYVAASRAKDNTEIITSDLDTLLR 1093 Query: 1456 AINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPARF 1515 V K TA + + + + A +VA R+V + L P Sbjct: 1094 NAGREVGKTTAVEFERAESSLDQSADQGAKHGATRSIEVAPTRSVETERTLERSPDPGNL 1153 Query: 1516 I 1516 + Sbjct: 1154 L 1154 Score = 114 bits (284), Expect = 4e-23, Method: Composition-based stats. Identities = 88/491 (17%), Positives = 168/491 (34%), Gaps = 47/491 (9%) Query: 770 LENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLAR 829 L++G PG + D+ V A + A + +S + ++ + + Sbjct: 258 LKHGI--DPGEASFDARRV-AKLDSRAAKQEHPREILQSVWEE---TAKEANLDVASIVE 311 Query: 830 HPSFTVVSEQIKTRAGETSLETAISHQKSA-------------LHTPAQQAIHLALPVVE 876 Q+ R E ++E + + + A +A+ A+ + Sbjct: 312 RAREAFADRQVPRRGVERTVEHGAAMGQDSGPSRGAAVSVSNDARANALRAVSWAIEHLT 371 Query: 877 SKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRAS 936 ++ AF++VDL A F+ E+ I+ ++ L+ + G G + + Sbjct: 372 EREQAFTLVDLEVTALKFSRGSIS--EIEWAIDQHVRNHMLVDRGITVG-GQIQYTTHKA 428 Query: 937 YEAEKSILRHILEGKE--------------AVMPLMERVPGELME--KLTSGQRAATRMI 980 + E + HIL G+ AV + E+ E KL+ Q A R + Sbjct: 429 IDNELKLAEHILAGRGQGNVVLDAEDQFDAAVAAFEAKKTAEIGEQFKLSGEQIQAARNV 488 Query: 981 LETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMR-SAGVD 1039 L D +QG AG GKT A ++ V + ++ V+G+ + A E+ S+G+ Sbjct: 489 LMHEDSIQGIQGEAGTGKT----AALAMVKDVAQAMGWEVIGVATSAAAAKELEASSGIQ 544 Query: 1040 AQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGD 1099 + T+A + R+ E + + +++ G D R A A + G Sbjct: 545 SDTVAGYFAKRDSAIRAVELRLQDLRKSISERATLRGLDD-QRIEARTLAVKSEDIDYGT 603 Query: 1100 TDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVK 1159 G+ FR + A A + EI REA + V E+V+ Sbjct: 604 HRYTFDHQRGEVFRSPENLRNAIGAALSEI---AARHREAAGTEQGHPVTLGEQARETVR 660 Query: 1160 PSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGR 1219 + + + ++ D +A + + Sbjct: 661 AAAANVAASLGRRLMTFEQIGTAEAVAARNTLYLERQGSATELDAEYARTQAKLENLRRY 720 Query: 1220 TPEAREQTLIV 1230 ++TLIV Sbjct: 721 GNVDGKKTLIV 731 Score = 75.7 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 77/649 (11%), Positives = 178/649 (27%), Gaps = 67/649 (10%) Query: 272 IKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERK 331 + + Q + + AA + + + A+ L + + Sbjct: 511 AMVKDVAQAMGWEVIGVATSAAAAKELEASSGIQSDTVAGYFAKRDSAIRAVELRLQDLR 570 Query: 332 VQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELS 391 + R + E + ID + + +F S ++ + + Sbjct: 571 KSIS-ERATLRGLDDQRIEARTLAVKSEDID--YGTHRYTFDHQRGEVFRSPENLRN--A 625 Query: 392 VRALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAE 451 + A +I ++R E+ P T G A + ++A G+ ++ AE Sbjct: 626 IGAALSEIAARHREAAGTEQGHPVTLG-EQARETVRAAAANVAASLGRRLMTFEQIGTAE 684 Query: 452 LVMMAREQGREVQIIAA--DRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGSTVIVDQ 509 V E Q A D + E L ++ L +++D+ Sbjct: 685 AVAARNTLYLERQGSATELDAEYARTQAKLENLRRYGNVDGKKTL----------IVMDE 734 Query: 510 GEKLSLKETLTLLDGAARHNVQVLITDSGQRTG---TGSALMAMKDAGVNTYRWQGGEQR 566 + +T LL A + ++ ++ G G A + AG+N + + Sbjct: 735 SSLTGVDDTEKLLRFAREIGARTVLQGDVKQHGSVAAGRAFEQAQIAGMNVSILEETRRF 794 Query: 567 PATIISEPD-----------------------RNVRYARLAGDFAASVKA-------GEE 596 + +A + +++ + Sbjct: 795 RDATAQTRQALADMKAGNYAQAIARLDTLRVAESDLAKTVAERYLENLQELTAKGVDAPK 854 Query: 597 SVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMV- 655 ++ ++ A+ L G++ P L + + M V Sbjct: 855 VGVVAITNSDRKLINAAVHQALTDVGIISGPHFEKPHLDDPKMTGAEQRYASMLSRNRVD 914 Query: 656 -----MEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKM 710 D + Q + + +A+G++ + D + E Sbjct: 915 ALIYRKSYREIGVEKGDVLTVTGYDVQKNRIYALNAKGKSVEINPQRQDYFSPAIQ-ESR 973 Query: 711 PVADGERLRVTG-----KIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPF 765 A G+R+ R+ G + + ++ + + + L D F Sbjct: 974 VFAVGDRVETRAIIRLPGQELNRLDNGTQGVIVAIDSLGAKIRWYRDGKESDLKNDDLRF 1033 Query: 766 TALKLENGWVETPGHSVSDSATVFASVTQMAMDN-ATLNGLARSGRDVRLYSSLDETRTA 824 + + G + + + + A +R+ + + +S D Sbjct: 1034 VDHAYAHTSYKEQGATNHREIVAVSKIGARVFNREAAYVAASRAKDNTEIITS-DLDTLL 1092 Query: 825 EKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALP 873 R T E RA + ++A K + A ++ Sbjct: 1093 RNAGREVGKTTAVEF--ERAESSLDQSADQGAKHGATRSIEVAPTRSVE 1139 >UniRef50_Q3SI89 Putative ATP-dependent exoDNAse (Exonuclease V) alpha subunit n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SI89_THIDA Length = 907 Score = 287 bits (733), Expect = 4e-75, Method: Composition-based stats. Identities = 136/691 (19%), Positives = 258/691 (37%), Gaps = 100/691 (14%) Query: 1 MMSIAQVRSAGSAGNYYT---------DKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDV 51 M+S++ + + A Y +++YY RW G+ A+++ L G + Sbjct: 1 MLSVSVIGAGSEAAGYAAYQENEVAAAQREDYYAGEGDVGRWVGKAAQEMSLAGELKPGQ 60 Query: 52 FTRLLEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDK---RLIDAHNQ 108 L+G P+ + ++ +H+ G+DLTFSAPKSVS + + + + DA N Sbjct: 61 LLAGLQGFHPETGEALS-KNAGEKHKGGWDLTFSAPKSVSCVWAVADPETRGAIEDAQNA 119 Query: 109 AVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH 168 A A++ +E + + ++E + A++ H TSR+ +PQLHTH V N Q Sbjct: 120 AAARALQFLEESGAFTSRS--RNEPGPVEGVAAAMYQHGTSREADPQLHTHVAVLN-VQP 176 Query: 169 NGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPG 228 +G + D K +A G +YR +L +++ LG E GK + + Sbjct: 177 DGT--AMDFDTRWK-----------MAAGAVYRAELAAEMQKLGLRVEADGK--SFRVVD 221 Query: 229 VP---VEAFSGRSQTIREAVGEDA--SLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKE 283 VP + FS R I EA+ S K+ +VAAL TRK K+ + A+W E Sbjct: 222 VPAAVEKEFSTRRGQIEEALAAKGLKSAKAAEVAALSTRKGKEPTTRDELFADWKTRAAE 281 Query: 284 TGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQA-VTQAIAGLSERKVQFTYTDVLAR 342 GF + + + + ++ + + + L+E+ FT + A Sbjct: 282 HGFSLESIQAL--------------RNAPRQQAEELDLDEILGKLTEQASTFTPQQLAAA 327 Query: 343 TVGILPPENGVIERARAGIDEAISREQLIPLDREK-----------GLFTSGIHVLDELS 391 + G + + + + L+ L+ +K +T+ + E Sbjct: 328 VAVEMQGRGG-ADAIQKALRDLTKHPDLVRLESDKPRHLMRGEPTETRYTTREMLGIEQG 386 Query: 392 VR----ALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRE 447 + A D+ + + T A+ + +D ++ I+ G G G+ Sbjct: 387 ILDKSMARQTDMSHRADIAAAIAARPTMTDEQKAALKHVCEDPGAVKIIEGMAG-TGKSY 445 Query: 448 RVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLE--GMAFTPGSTV 505 + G EV+ A ++ ++ ++ + I L+ S + Sbjct: 446 LMDAARESWEAAGFEVEGAALAGKAASGLESGADINSKTIHSLLFQLDSGQRQLHSKSIL 505 Query: 506 IVDQGEKLSLKETLTLLDGAARHNVQVLITDSG---QRTGTGSALMAMKD----AGVNTY 558 ++D+G + ++ +LD + + ++ Q G A + + A + Sbjct: 506 VIDEGGMVGSRQLARVLDHVHKAGAKAVMVGDSWQLQPIDAGGAFRLLSERLGSARLENI 565 Query: 559 RWQGGEQRPATIISEPD---------------------RNVRYARLAGDFAASVKAGE-- 595 Q E + D R + D+A + + Sbjct: 566 VRQKHEVDRRVVRLFADGKAAEALESMRERGLLKTAETRAQAMQEMVRDWAQARDPSKPG 625 Query: 596 ESVAQVSGVREQAILTQAIRSELKTQGVLGL 626 ES+ + E A L + R LK +G L Sbjct: 626 ESIMLAATRSEVAHLNNSARQILKAEGRLAG 656 Score = 227 bits (579), Expect = 3e-57, Method: Composition-based stats. Identities = 130/689 (18%), Positives = 233/689 (33%), Gaps = 131/689 (19%) Query: 817 SLDETRTAEKLARHPSFTVVSEQIKTRAGETSLE-TAISHQKSALHTPAQQA-IHLALPV 874 + + K + + KTRA E +I ++A A++ + L Sbjct: 252 AEVAALSTRKGKEPTTRDELFADWKTRAAEHGFSLESIQALRNAPRQQAEELDLDEILGK 311 Query: 875 VESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAK-------GYG 927 + + F+ L G + + K DL+ ++ K Sbjct: 312 LTEQASTFTPQQLAAAVAVEMQGRGGADAIQKALRDLTKHPDLVRLESDKPRHLMRGEPT 371 Query: 928 TGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELME-KLTSGQRAATRMILETSDR 986 +R E+ IL + + + + +T Q+AA + + E Sbjct: 372 ETRYTTREMLGIEQGILDKSMARQTDMSHRADIAAAIAARPTMTDEQKAALKHVCEDPGA 431 Query: 987 FTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRS-AGVDAQTLAS 1045 +++G AG GK+ A E+ V G +A + S A ++++T+ S Sbjct: 432 VKIIEGMAGTGKSYLM----DAARESWEAAGFEVEGAALAGKAASGLESGADINSKTIHS 487 Query: 1046 FLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQA 1105 L Q SG+ S ++ ++DE MVG+ +AR + G +AV GD+ QLQ Sbjct: 488 LL----FQLDSGQRQLHSKSILVIDEGGMVGSRQLARVLDHVHKAGAKAVMVGDSWQLQP 543 Query: 1106 IAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPR 1165 I G FRL R + A ++ IVRQ E+ V L +A LES++ + + Sbjct: 544 IDAGGAFRLLSERLGS--ARLENIVRQKHEVDRRVVRLFA--DGKAAEALESMRERGLLK 599 Query: 1166 QEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYT-GRTPEAR 1224 + + +VRD+ R P Sbjct: 600 T-----------------------------------AETRAQAMQEMVRDWAQARDPSKP 624 Query: 1225 EQTLIVTHLNEDRRVLNSMIHDVREKAGEL-GKEQVMVPVLNTANIRDGELRRLSTWETH 1283 +++++ + LN+ + + G L G QV G ++ + Sbjct: 625 GESIMLAATRSEVAHLNNSARQILKAEGRLAGGLQVP---------TAGGMKEFA----V 671 Query: 1284 RDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGD 1343 D ++ N +++ +GT + Sbjct: 672 GDRIIFGKNN------------------------------------SVFGVKNGELGTVE 695 Query: 1344 RMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAH 1403 +RF K+ T +G +V + G++ + D YA+T H Sbjct: 696 SVRFNKT-------GQVEITARHDNGKAVKFTVGEEKGQFEV--------FDYGYAMTVH 740 Query: 1404 GAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYT--DNRQGWTDAINNAV 1461 AQG + A L M+ E YVA+SR + ++Y D+ + T ++ A Sbjct: 741 KAQGVTVDRAFVLPSDS-----MSSREWTYVAMSRHRLEARMYITRDSVEALTKTMSRAQ 795 Query: 1462 QKGTAHDVFEPKPDREVMNAERLFSTARE 1490 K T+ D + E S RE Sbjct: 796 GKETSLDFKLAATSEKTDAPESTTSLDRE 824 >UniRef50_D1BL70 TrwC relaxase n=1 Tax=Veillonella parvula DSM 2008 RepID=D1BL70_VEIPT Length = 861 Score = 285 bits (728), Expect = 2e-74, Method: Composition-based stats. Identities = 153/945 (16%), Positives = 312/945 (33%), Gaps = 190/945 (20%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGER-WAGRGAEQLGLQGSVDKD-------VF 52 M++ + V S AG YY +KD+YY E W G GL S+ D Sbjct: 1 MVTTSNV-STIQAGQYY-NKDDYYSRTITQEDFWFGN-----GLLSSIGDDIPNPYKSTI 53 Query: 53 TRLLEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDK-RLIDAHNQAVD 111 T L + + + + + + DLTFS PKS+S+ + K L+DAHNQAV Sbjct: 54 TPLSQDNYEQKVNTLKDELTPDAKKLAIDLTFSPPKSISIAMLNPALKYDLLDAHNQAVK 113 Query: 112 FAVRQVEA-LASTRVM--TDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH 168 + VE+ R D ++E + T N + A H SR+Q+PQLHTH ++ T Sbjct: 114 NVLTFVESNYVVWRKHTNKDNRTENIKTKNALFACLQHRVSREQDPQLHTHCLLFRKTMI 173 Query: 169 NGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETE----VVGKHGMW 224 N + T+ +++NQ F +Y +L + ++ K+ + Sbjct: 174 NSKIMTIEDRF---------IHSNQYLFSLMYDNELSKALQEKRIPLRESLSKDQKNIHF 224 Query: 225 EMPGVP---VEAFSGRSQTIREAVGEDASLKSRD---VAALDTRKSKQHVDPEIKMAEWM 278 E+ G+ ++ FS R I++ + D A L +R+ K D EW Sbjct: 225 EIEGINDTLIDYFSKRKHQIQDYQANQGFSDTWDGAHAAGLASRRPKPPEDLATLEKEWR 284 Query: 279 QTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTD 338 +T+ G + + T + + + ++I L E+ F+ +D Sbjct: 285 KTIDNLGGFV------------INKSTHNKDTSRPLKLNDILKKSIDNLQEKSYAFSKSD 332 Query: 339 VLARTVGILPPENGVIERARAGIDEAISREQL-IPLDREKG--LFTSGIHVLDELSVRAL 395 ++ + + + + + + FT+ ++ + +L Sbjct: 333 LMIEVYKQGIMLGVTVSEFENIFEHHLQSTLIQVGFRQLNNEIYFTTPKNLARAKYIDSL 392 Query: 396 ----------------SRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQ 439 + + + + + G +A++++ V G Sbjct: 393 LLGPKIENYSTLDQNDANTKIDILSNNLKLSQGWELSKGQKEAINLMLSSSNKYIAVEGI 452 Query: 440 GGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEG--- 496 G +G+ + + ++ QG V +A ++ ++ + +S + I L Sbjct: 453 AG-SGKTTMLEQAKLLYESQGVNVIGMAFTGKATEALESEAAISSQTIHKYLNHLSPTTP 511 Query: 497 ---------MAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVL-ITDSGQR--TGTG 544 IVD+ L+ +L+ + R N +V+ + D Q GTG Sbjct: 512 HNFWDFSSVKKAETPEVWIVDESSMLTDHLLSNILEASERRNAKVVFLGDPNQLLPIGTG 571 Query: 545 SALMAMKDAG---VNTYRWQGGEQRPA-----------------------------TIIS 572 +A M V T R + ++ +I Sbjct: 572 NAFARMTRKDNEQVPTVRMREINRQEEGSNLRKTVEALSGKFENIEKQSPLSYIDNSIKE 631 Query: 573 EPDRNVRYARLAGDFAA-SVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTM 631 P R R + ++ +++ ++S V+ ++ L I L +G L + Sbjct: 632 IPQRQYRLNSVIHEYCNYTLEQQDKSAILVARNNDRNELNSEIHKRLIEKGTLKNENL-- 689 Query: 632 TALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQ 691 L+ V + Y G ++V + L+D GET Sbjct: 690 --LTSVNQYGIE--SSNPYAIG------------------EKVIFTKNDYKLKDTTGETV 727 Query: 692 VVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPG 751 ++ L + + + G ++ V + + + Sbjct: 728 GIKNGQLG--------KIINI------------------NGPKVTVQTNTNQNVI----- 756 Query: 752 RAEPATLPVSDSPFTALKLENGWVET--PGHSVSDSATVFASVTQMAMDNAT---LNGLA 806 + G+ T ++ + + N ++ Sbjct: 757 ----------FDTREYKHFDYGYAMTTFKAQGITVDNALIVHDSTQKNSNTRNKIYVDVS 806 Query: 807 RSGRDVRLYSSLDETRT--AEKLARHPSFTVVSEQIKTRAGETSL 849 R+ + V++++ E A++ + + + + I + Sbjct: 807 RAKKSVKIFTDDKEALIKQAKRFQQKITSSTFTPYIAKGKERKPI 851 Score = 265 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 116/620 (18%), Positives = 208/620 (33%), Gaps = 127/620 (20%) Query: 872 LPVVESKKLAFSMVDLLTEAKSFAAE-GTGFTELGGEINAQIKRGDLLYVDVAKGYGTGL 930 + ++ K AFS DL+ E G +E ++ L+ V + Sbjct: 318 IDNLQEKSYAFSKSDLMIEVYKQGIMLGVTVSEFENIFEHHLQS-TLIQVGFRQLNNEIY 376 Query: 931 LVSRASYEAEKSILRHIL-------------EGKEAVMPLMERVPGELMEKLTSGQRAAT 977 + + K I +L + + L + +L+ GQ+ A Sbjct: 377 FTTPKNLARAKYIDSLLLGPKIENYSTLDQNDANTKIDILSNNLKLSQGWELSKGQKEAI 436 Query: 978 RMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMR-SA 1036 ++L +S+++ V+G AG GKTT +L ES+ V+G+ T +A + A Sbjct: 437 NLMLSSSNKYIAVEGIAGSGKTTML----EQAKLLYESQGVNVIGMAFTGKATEALESEA 492 Query: 1037 GVDAQTLASFLHDTQ------LQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAG 1090 + +QT+ +L+ S + ++++DESSM+ + ++ Sbjct: 493 AISSQTIHKYLNHLSPTTPHNFWDFSSVKKAETPEVWIVDESSMLTDHLLSNILEASERR 552 Query: 1091 GGRAVASGDTDQLQAIAPGQPFRLQQTRSA--ADVAIMKEIVRQTP--ELREAVYSLINR 1146 + V GD +QL I G F + M+EI RQ LR+ V +L Sbjct: 553 NAKVVFLGDPNQLLPIGTGNAFARMTRKDNEQVPTVRMREINRQEEGSNLRKTVEALSG- 611 Query: 1147 DVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPM 1206 K + +Q ++S+ E Q Sbjct: 612 ------------KFENIEKQSPLSYIDNSIKEIPQRQ----------------------- 636 Query: 1207 TLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNT 1266 +++ +Y T E ++++ I+ N DR LNS IH + G L E ++ V Sbjct: 637 YRLNSVIHEYCNYTLEQQDKSAILVARNNDRNELNSEIHKRLIEKGTLKNENLLTSV--- 693 Query: 1267 ANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVA 1326 + N Y + L+D G T Sbjct: 694 -----------------NQYGIESSNPYAIGEKVIFTKNDYKLKDTTGETV--------- 727 Query: 1327 EGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPG 1386 G + + ++G VT+ I Sbjct: 728 ----------------------------GIKNGQLGKIININGPKVTVQTNTNQNVIFDT 759 Query: 1387 QEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVY 1446 +E +H D YA+T AQG + A+ + + YV +SR K+ V+++ Sbjct: 760 RE--YKHFDYGYAMTTFKAQGITVDNALIVHDSTQKNSNTRNK--IYVDVSRAKKSVKIF 815 Query: 1447 TDNRQGWTDAINNAVQKGTA 1466 TD+++ QK T+ Sbjct: 816 TDDKEALIKQAKRFQQKITS 835 >UniRef50_B9MIL4 Conjugative relaxase domain protein n=1 Tax=Diaphorobacter sp. TPSY RepID=B9MIL4_DIAST Length = 1093 Score = 282 bits (720), Expect = 1e-73, Method: Composition-based stats. Identities = 155/770 (20%), Positives = 283/770 (36%), Gaps = 103/770 (13%) Query: 1 MMSIAQVRSAGSA---GNYY------TDKDNYYVLGSMGERWAGRGAEQLGLQGS-VDKD 50 M+S+ ++S G YY + N +W G +E+LG + S V + Sbjct: 1 MLSMKSIKSGGGVSKVAAYYEGYQLGAEDPNAKQHDEPNGKWIGAFSERLGFKDSIVHRG 60 Query: 51 VFTRLLEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGG---DKRLIDAHN 107 L+G P + G RH+PGYDLTFSAPKSVS+ + + AH Sbjct: 61 EIESALKGYDPKTGNPFSNNAGDERHKPGYDLTFSAPKSVSVAWASASPELQREISAAHQ 120 Query: 108 QAVDFAVRQVEALASTRVMTDGQSETVLTG--NLVMALFNHDTSRDQEPQLHTHAVVANV 165 +A++ A+ E + +G + + + A F H ++R EP LHTH VV N+ Sbjct: 121 RAIESAIEYAEQTGGAFIQREGHAGAIKVPHHEIAAATFEHSSNRAGEPHLHTHCVVMNI 180 Query: 166 TQHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWE 225 +++ GK + YA+ G YR + ++E LG++ E GK + Sbjct: 181 SEN------------GKRVDFDTRYAH--TIGTAYRAEFAHELEKLGFQIEKDGK--SFR 224 Query: 226 MPGVPVEA---FSGRSQTIREAVGEDA--SLKSRDVAALDTRKSKQHVDPEIKMAEWMQT 280 + G P E S R+ I E + S K+R++ L TR+ K E + Sbjct: 225 LDGFPKELEQQLSTRAAQIAERQAQTGMKSDKAREMHQLATREMKGERPRETAFNAAREA 284 Query: 281 LKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVL 340 E GF++ + RD + Q + + PA +A + + Sbjct: 285 AAENGFNVESLRDQSHQASQGKE---PPAQLHETAFSEA------------STLSRAQLE 329 Query: 341 ARTVGILPPENGVIERARAGIDEAISREQLIPLDREKG--LFTSGIHVLDELSVRALSR- 397 I+ A + + E +L+ L ++G FTS + E + ++ Sbjct: 330 RAAFERAQVNGQDIKAALSELRELEQSGELVRLKDKEGNDRFTSREMLEIETGLAQYAKA 389 Query: 398 ------DIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAE 451 D +R + + + A+ + R S A+V G G AG+ + Sbjct: 390 AAHTPTDARADSRNVEDLIQKKGLSNDQAQAMRHITDSRNSFAVVEGTAG-AGKSYMLGA 448 Query: 452 LVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEG--MAFTPGSTVIVDQ 509 G V A ++ +++ + + I G Q +E + + V+VD+ Sbjct: 449 AREAWEASGSRVVGCALAGKAASGLEEGSGIKSDTIHGTLQRIERGELQLDKQTVVVVDE 508 Query: 510 GEKLSLKETLTLLDGAARHNVQVLITDSGQRTG---TGSALMAM-----KDAGVNTYRWQ 561 + L D A + +V++ ++ G A+ +M + A + R Q Sbjct: 509 AGMAGSRLMSRLCDQAQQAGAKVVLVGDTRQLQPVDAGGAMRSMKTAAGQAAEMTEIRRQ 568 Query: 562 GGEQRPATIISEPDRNVRY---------------------ARLAGDFAASVKAGEESVAQ 600 E + + +A + ++ G+ S++ Sbjct: 569 HHEADRQMVTDLKNGEAGKALQTMQERGYLREHATPEHMREAIARNVVNDLREGKTSISL 628 Query: 601 VSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVM---- 656 + +E + QA R++ + G+L P+ T T S + G + Sbjct: 629 AARRQEVQAINQAARAQARDAGLLHGPDRTFTTQR----TPESAERAQAFAVGDRVITLK 684 Query: 657 EQWNPETRSHDRYVIDRVTAQSHSLTL-RDAQGETQVVRISSLDSSWSLF 705 + + ++ + + AQ LTL RD G+ Q + + + Sbjct: 685 NDRSLDLKNGQTWTVT--AAQDGRLTLKRDGDGKEQSISQKQYKALDHAY 732 Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 102/490 (20%), Positives = 171/490 (34%), Gaps = 74/490 (15%) Query: 857 KSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEA-------KSFAAEGTGFTELGGEIN 909 +L + QA P + + AFS L+ A + G E+ Sbjct: 292 VESLRDQSHQASQGKEPPAQLHETAFSEASTLSRAQLERAAFERAQVNGQDIKAALSELR 351 Query: 910 AQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLM--ERVPGELME 967 + G+L+ + +G SR E E + ++ R +L++ Sbjct: 352 ELEQSGELVRLKDKEG--NDRFTSREMLEIETGLAQYAKAAAHTPTDARADSRNVEDLIQ 409 Query: 968 K--LTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGP 1025 K L++ Q A R I ++ + F VV+G AG GK+ A A E+ RVVG Sbjct: 410 KKGLSNDQAQAMRHITDSRNSFAVVEGTAGAGKSYMLGAAREA----WEASGSRVVGCAL 465 Query: 1026 THRAVGEMRS-AGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAY 1084 +A + +G+ + T+ L + GE T+ ++DE+ M G+ M+R Sbjct: 466 AGKAASGLEEGSGIKSDTIHGTLQRIE----RGELQLDKQTVVVVDEAGMAGSRLMSRLC 521 Query: 1085 ALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPE-LREAVYSL 1143 G + V GDT QLQ + G R +A A M EI RQ E R+ V L Sbjct: 522 DQAQQAGAKVVLVGDTRQLQPVDAGGAMR-SMKTAAGQAAEMTEIRRQHHEADRQMVTDL 580 Query: 1144 INRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPD 1203 N + +AL + QE + EH+ E Sbjct: 581 KNGEAGKALQTM----------QERGYLREHATPEH------------------------ 606 Query: 1204 VPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPV 1263 + EAI R+ + ++ + ++ + +N AG L Sbjct: 607 ----MREAIARNVVN-DLREGKTSISLAARRQEVQAINQAARAQARDAGLLHGPDRTFTT 661 Query: 1264 LNTANIRDGELRRLSTWETHRDALVLVDNVY------HRIAGISKDDGLITL-QDAEGNT 1316 R + + L ++ + DG +TL +D +G Sbjct: 662 QR----TPESAERAQAFAVGDRVITLKNDRSLDLKNGQTWTVTAAQDGRLTLKRDGDGKE 717 Query: 1317 RLISPREAVA 1326 + IS ++ A Sbjct: 718 QSISQKQYKA 727 Score = 82.2 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 44/246 (17%), Positives = 87/246 (35%), Gaps = 12/246 (4%) Query: 1232 HLNEDRRVLNSMIH-DVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLV 1290 H DR+++ + + + + + + + ++R+ R + + + Sbjct: 569 HHEADRQMVTDLKNGEAGKALQTMQERGYLREHATPEHMREAIARNVVNDLREGKTSISL 628 Query: 1291 DNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKS 1350 + I++ Q + R + GDR+ K+ Sbjct: 629 AARRQEVQAINQAARA---QARDAGLLHGPDRTFTTQRTPESAERAQAFAVGDRVITLKN 685 Query: 1351 DRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASE 1410 DR WTVTA +TL +E Q+Q + +D AY T H +QG + Sbjct: 686 DRSLDLKNGQTWTVTAAQDGRLTLKRDGDGKEQSISQKQ-YKALDHAYCATVHKSQGVTV 744 Query: 1411 TFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDN--RQGWTDAINNAVQKGTAHD 1468 A + + + ++ YVA SR ++ + + N R ++ A K T+ D Sbjct: 745 DRAHVAHDSAMSDRSLS-----YVAASRHREAMSYHHTNAQRDELHKEMSRARDKDTSAD 799 Query: 1469 VFEPKP 1474 +P Sbjct: 800 YERAQP 805 >UniRef50_C7CNC3 Putative uncharacterized protein n=1 Tax=Methylobacterium extorquens DM4 RepID=C7CNC3_METED Length = 1117 Score = 275 bits (704), Expect = 8e-72, Method: Composition-based stats. Identities = 154/687 (22%), Positives = 261/687 (37%), Gaps = 96/687 (13%) Query: 16 YYTDKDN------YYVLGSMGERWAGRGAEQLGLQ---GSVDKDVFTRLLEGRLPDGADL 66 YYTD ++ GS E GR + L G VD V L GR P+ + Sbjct: 84 YYTDNGAGEANGVWWTRGSGSEVGPGRFGDPFRLCPDGGDVDGRVLRDLAAGRDPESLEP 143 Query: 67 SRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDK---RLIDAHNQAVDFAVRQVEA--LA 121 + GYDL F+APKSVS++A G + R++ AH++AV A+ A L Sbjct: 144 LVRASANGGRSVGYDLQFAAPKSVSVLAAFAGPEERARILAAHDRAVHRALDYAHAAGLI 203 Query: 122 STRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANV-TQHNGEWKTLSSDKV 180 TR G + A++ H TSR Q+PQLH+HAV+ N+ + +G L + Sbjct: 204 VTRTGAQG-RHHAPAAGVSAAVYRHFTSRAQDPQLHSHAVLLNLCVRADGSTGGLDN--- 259 Query: 181 GKTGFIENVYANQIAFGRLYREKLKEQVE-ALGYETEVVGKHGMWEMPGVP---VEAFSG 236 + N LYR +L + LGYE G++ +E+ GV +E FS Sbjct: 260 ------RAILKNAGGIAALYRSELASGLRSGLGYEAVRAGRN--FEIAGVAEPVLELFSK 311 Query: 237 RSQTIREAVGEDASLKSRD-----VAALDTRKSK-QHVDPEIKMAEWMQTLKETGFDIRA 290 R I E S+D AA DTR K + + AEW + L + G+ A Sbjct: 312 RRAAIERVARERGFETSKDRAAAQAAAFDTRARKNREMPLAALEAEWERQLVQAGWARGA 371 Query: 291 YRDAADQRAD-LRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPP 349 + AD +R GPA++ + +A + G + D++ R L Sbjct: 372 VFEGVRIAADGIREARVGPAAERRQRLAEA---GLTGALAMQAVVEERDLVRRVAEALQC 428 Query: 350 ENGVIERARAGIDEAISREQLIPLDRE---KGLFTSGIHVLDELSV------RALSRDIM 400 E G + ++ ++ + R + ++ + + E + R R + Sbjct: 429 EAG-ADAVLDEVERLCRDGGVVAVGRTAEGEAVYATPEMIEAERGMLRRAYGRQDERAFV 487 Query: 401 KQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQG 460 + V + A AV +R ++++ G G +G+ +A + R G Sbjct: 488 PEAVVRRVLLERPSLRAEQRAAVRHAL-NRDGVSVIEGSAG-SGKSYAMASVAEAVRACG 545 Query: 461 REVQIIAADRRSQMNMKQDERLSGEL---ITGRRQLLEGMAFT--PGSTVIVDQGEKLSL 515 EV +IA ++ ++ D + + +TG ++ T P +TVI D+ + Sbjct: 546 GEVWVIAPSWKAVDVIRTDTATAEAMARAVTGFLGRIDKGEITLGPETTVIADEAGMIGT 605 Query: 516 KETLTLLDGAARHNVQVLITDSGQRTG---TGSALMAMKD-------------------- 552 ++ L++ +++++ ++ G+ + + Sbjct: 606 RDLAALVEATGAAGAKLVLSGDTRQLAPVVAGAPMRLLVRALGAARMDEIQRQRGRSESE 665 Query: 553 -----------AGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAAS---VKAGEESV 598 A T R R I DR L +A S + E + Sbjct: 666 GAWMRAASIDFAAGRTARALEAYDRGGAITWGGDREATIQALVDAYAVSRRDPEGAERTR 725 Query: 599 AQVSGVR-EQAILTQAIRSELKTQGVL 624 A ++G + L IR LK G+L Sbjct: 726 AVLTGWNKDVRALNARIRDRLKQDGLL 752 Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 131/635 (20%), Positives = 222/635 (34%), Gaps = 100/635 (15%) Query: 879 KLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYE 938 + DL+ G + E+ + G ++ V G + + E Sbjct: 410 QAVVEERDLVRRVAEALQCEAGADAVLDEVERLCRDGGVVAVGRTAE-GEAVYATPEMIE 468 Query: 939 AEKSILRHILEGKEAVMPLMERVPGELMEK---LTSGQRAATRMILETSDRFTVVQGYAG 995 AE+ +LR ++ + E V ++ + L + QRAA R L D +V++G AG Sbjct: 469 AERGMLRRAYGRQDERAFVPEAVVRRVLLERPSLRAEQRAAVRHAL-NRDGVSVIEGSAG 527 Query: 996 VGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVDAQTLASFLHDTQLQQR 1055 GK+ +V AV V + P+ +AV +R+ A+ +A + + Sbjct: 528 SGKSYAMASVAEAVRAC----GGEVWVIAPSWKAVDVIRTDTATAEAMARAVTGFLGRID 583 Query: 1056 SGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQ 1115 GE T + DE+ M+G D+A A G + V SGDT QL + G P RL Sbjct: 584 KGEITLGPETTVIADEAGMIGTRDLAALVEATGAAGAKLVLSGDTRQLAPVVAGAPMRLL 643 Query: 1116 QTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHS 1175 A A M EI RQ EGAW S Sbjct: 644 VRALGA--ARMDEIQRQRGR----------------------------SESEGAWMRAAS 673 Query: 1176 VTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQT-LIVTHLN 1234 + +F+ + A+ EA + + R PE E+T ++T N Sbjct: 674 I-DFAAGRTARALEAYDRGGAITWGGDREATIQALVDAYAVSRRDPEGAERTRAVLTGWN 732 Query: 1235 EDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVY 1294 +D R LN+ I D ++ G L + + E L T D ++ ++V Sbjct: 733 KDVRALNARIRDRLKQDGLLPEGADVEIAAIPRGGSQAEPVSL----TVGDEVMFGESVE 788 Query: 1295 HRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRER 1354 I D L ++ G P + + +R KS Sbjct: 789 VEGQMIRNAD-LARIEALSG-----DPDDPML-----------------TLRLAKS---- 821 Query: 1355 GYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAI 1414 G +++ PG+ + + + +YA+T H +QG + A Sbjct: 822 --------------GARLSVRASALVGFREPGEPRVPR-LQHSYAMTTHASQGVTVDEAF 866 Query: 1415 ALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKP 1474 + G E+ YVA++R ++ +++ D TD I ++ A P+ Sbjct: 867 VAD------LRGTGAEATYVAMTRHRRSSRLFVD-----TDRIRERLE--AARSGIRPEE 913 Query: 1475 DREVMNAERLFSTARELRDVAAGRAVLRQAGLAGG 1509 + L +A L ++ +GG Sbjct: 914 RGLTSGRGAARAELTPLGHSEIRQAYLAESASSGG 948 >UniRef50_Q44349 Conjugal transfer protein traA n=12 Tax=Rhizobiales RepID=TRAA_AGRT5 Length = 1100 Score = 270 bits (689), Expect = 5e-70, Method: Composition-based stats. Identities = 143/645 (22%), Positives = 229/645 (35%), Gaps = 143/645 (22%) Query: 872 LPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEI--NAQIKRGDLLYVDVAKGYGTG 929 L ++ +K F D+ + + F +L I N ++ R ++ A G Sbjct: 278 LDLIMREKSVFDERDVAKVLHRYVDDPAVFQQLMLRIILNPEVLRLQRDTIEFATGEKVP 337 Query: 930 -LLVSRASYEAEKSILRH--ILEGKEAVMPLMERVPGELME--KLTSGQRAATRMILETS 984 +RA E ++ R L KE + +L+ Q+AA I Sbjct: 338 ARYSTRAMIRLEATMARQAMWLSDKETHAVSTAVLAATFGRHGRLSEEQKAAIECI-AGP 396 Query: 985 DRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM-RSAGVDAQTL 1043 R V G AG GKTT +A A E RVVG +A + + AG++++TL Sbjct: 397 ARIAAVVGRAGAGKTTMMKAAREA----WELAGYRVVGGALAGKASEGLDKEAGIESRTL 452 Query: 1044 ASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQL 1103 +S+ +L+ G + T+F++DE+ MV + MA + G + V GD +QL Sbjct: 453 SSW----ELRWNRGRDVLDNKTVFVMDEAGMVASKQMAGFVDAVVRAGAKIVLVGDPEQL 508 Query: 1104 QAIAPGQPFRLQQTRSAADVAIMKEIVRQTPE-LREAVYSLINRDVERALSGLESVKPSQ 1162 Q I G FR R A ++ I RQ + +R+A L +VE+AL+ + Sbjct: 509 QPIEAGAAFRAIVDRIG--YAELETIYRQREDWMRKASLDLARGNVEKALALYNANARIV 566 Query: 1163 VPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPE 1222 R + E ++ D+ R + Sbjct: 567 GERLK--------------------------------------AEAVERLIADW-NRDYD 587 Query: 1223 AREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWET 1282 + TLI+ HL D R+LN M + + G +G+ V DGE R + Sbjct: 588 QTKTTLILAHLRRDVRMLNVMAREKLVERGIVGEGHVFRTA-------DGERRFHA---- 636 Query: 1283 HRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTG 1342 D ++ L+ N L+ + + V P+ I G Sbjct: 637 --------------------GDQIVFLK----NETLLGVKNGMIGHVVEAVPNRIVAVVG 672 Query: 1343 DRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITA 1402 DR D R V + ++D YA T Sbjct: 673 DR------DHRRHVVVEQRF----------------------------YSNLDHGYATTI 698 Query: 1403 HGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNR-----QGWTDAI 1457 H +QGA+ L +R L YVA++R ++ +Q+Y R G + Sbjct: 699 HKSQGATVDRVKVLASLSLDRHLT------YVAMTRHREDLQLYYGCRSFAFNGGLAKVL 752 Query: 1458 NNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLR 1502 + K T D K RE + F+ R L + R +LR Sbjct: 753 SRKNAKETTLDYERGKLYREALR----FAENRGLHIMQVARTMLR 793 Score = 80.7 bits (197), Expect = 5e-13, Method: Composition-based stats. Identities = 112/779 (14%), Positives = 236/779 (30%), Gaps = 116/779 (14%) Query: 281 LKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVL 340 + +A + + L S++ + + + + K F DV Sbjct: 235 VGAKAISRKAEQQGVRPELERIELNEERRSENTRRILKNPAIVLDLIMREKSVFDERDV- 293 Query: 341 ARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSR--- 397 A+ + + V ++ I I +++ L R+ F +G V S RA+ R Sbjct: 294 AKVLHRYVDDPAVFQQLMLRI---ILNPEVLRLQRDTIEFATGEKVPARYSTRAMIRLEA 350 Query: 398 DIMKQNRVTVHPEKSVPRTAGYSDAV----SVLAQDRPSLAIVSGQG--------GAAGQ 445 + +Q E TA + + + + ++ ++G AG+ Sbjct: 351 TMARQAMWLSDKETHAVSTAVLAATFGRHGRLSEEQKAAIECIAGPARIAAVVGRAGAGK 410 Query: 446 RERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITG--RRQLLEGMAFTPGS 503 + G V A ++ + ++ + ++ R + Sbjct: 411 TTMMKAAREAWELAGYRVVGGALAGKASEGLDKEAGIESRTLSSWELRWNRGRDVLDNKT 470 Query: 504 TVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSG---QRTGTGSALMAMKD----AGVN 556 ++D+ ++ K+ +D R ++++ Q G+A A+ D A + Sbjct: 471 VFVMDEAGMVASKQMAGFVDAVVRAGAKIVLVGDPEQLQPIEAGAAFRAIVDRIGYAELE 530 Query: 557 TYRWQGG---------------------EQRPATIISEPDRNVRYARLAGDFAASVKAGE 595 T Q A I+ E + RL D+ + Sbjct: 531 TIYRQREDWMRKASLDLARGNVEKALALYNANARIVGERLKAEAVERLIADWNRDYDQTK 590 Query: 596 ESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTA---------LSPVWLDSRSRYL 646 ++ R+ +L R +L +G++G V TA V+L + + Sbjct: 591 TTLILAHLRRDVRMLNVMAREKLVERGIVGEGHVFRTADGERRFHAGDQIVFLKNETLLG 650 Query: 647 RDMYRPGMVMEQWNP------ETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDS 700 G V+E R H R+V+ S+ G + S + Sbjct: 651 VKNGMIGHVVEAVPNRIVAVVGDRDHRRHVVVEQRFYSNL-----DHGYATTIHKSQGAT 705 Query: 701 SWSLFRPEKMPVADGER----LRVTGKIPGLRVS--------GGDRLQVASVSEDAMTVV 748 + + + +R + +T L++ G +V S T + Sbjct: 706 VDRVKVLASLSL---DRHLTYVAMTRHREDLQLYYGCRSFAFNGGLAKVLSRKNAKETTL 762 Query: 749 VPGRAEPATLPVSDSPFTALKLEN----------GWVETPGHSVSDSATVFASVTQM--- 795 R + + + L + W VSD ++ + Sbjct: 763 DYERGKLYREALRFAENRGLHIMQVARTMLRDRLDWTLRQKTKVSDLVHRLRALGERLGL 822 Query: 796 --AMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAI 853 + T+ A ++ +S +KL P+ E++ R Sbjct: 823 DQSPKTQTMKEAAPMVTGIKTFSGSVADTVGDKLGADPTLKQQWEEVSAR---------F 873 Query: 854 SHQKSALHTPAQQAIHLALPVVESKKLAFS-MVDLLTEAKSFAAEGTGFTELGGEINAQI 912 + + T A +A++ V+ K+ A + + L E S A L + + Sbjct: 874 RYVFADPET-AFRAVNFD-TVLADKEAAKAVLQKLEAEPASIGALKGKTGILASKTEREA 931 Query: 913 KRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVM---PLMERVPGELMEK 968 +R + V K L R + A I+ ++ V P + ++E+ Sbjct: 932 RRVAEVNVPALKRDLEQYLRMRET--ATLRIVTEEQALRQRVSIDIPALSPAARVVLER 988 >UniRef50_A5ESN8 Putative ATP-dependent exoDNAse n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5ESN8_BRASB Length = 918 Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 149/699 (21%), Positives = 260/699 (37%), Gaps = 84/699 (12%) Query: 3 SIAQVRSAGSAGNYYTDKDNYY--VLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRL 60 S+ + ++ YY YY G +A RG +V + F RL EG Sbjct: 9 SVVATWNVAASSAYYVRGAEYYLGSREPEGVWYAPRGDLGRRDAATVQRQEFARLYEGLG 68 Query: 61 PDGADLSRMQDGSNRHR-PGYDLTFSAPKSVSMMAMLGGD---KRLIDAHNQAVDFAVRQ 116 +G L G R P +DLTFSAP+SVS+ + + L A +AV + Sbjct: 69 ENGQSLITNSGGKAIRRVPAFDLTFSAPRSVSLAWAFADEDLRRNLEAAQERAVRATLAT 128 Query: 117 VEALA-STRVMTDGQSETVLTGNLVMALFNHDTSRD---------QEPQLHTHAVVANV- 165 +E A R DG V L ALF H SR +P LHTHAVV N+ Sbjct: 129 IEQEAIYARRGKDG--AYVEKVALTAALFQHGESRPAEHADGRLFGDPNLHTHAVVLNMA 186 Query: 166 TQHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWE 225 T+ +G L S + ++A G +Y L ++ LG+ + VG++G +E Sbjct: 187 TRADGTVGALHSTVLRDW---------KMAAGAVYHAALANEMTDLGFGIDRVGRNGTFE 237 Query: 226 MPGV---PVEAFSGRSQTIREAVGEDASL-----KSRDVAALDTRKSKQ-HVDPEIKMAE 276 + G+ + FS R Q I + + E + A TR +K+ D E Sbjct: 238 LAGIGDQAITYFSARRQEIEKELAEAGTTSGSSAALASAVAKSTRHAKELDADRETV--- 294 Query: 277 WMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTY 336 W + + G D AA Q+ R G A G + V A L++ + Sbjct: 295 WREAAQSAGLDGD--IRAALQQRSAREFVVGDA---GRIFAERVATLPAELTQHESVVDR 349 Query: 337 TDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDRE---KGLFTSGIHVLDELSVR 393 +++ + R +D+ ++ + + R+ + +++ + E + Sbjct: 350 RELVRSVHAASVGLGLPLSRVDGEVDQLVTSGTFVEIGRDAIGQVRYSTPEMIAIERDLV 409 Query: 394 ALSRDIMKQNRVTVHPEKSVPRTAGY----SDAVSVLAQDRPSLAIVSGQGGAAGQRERV 449 A + + + V + P R+A + A P+ +V +G+ + Sbjct: 410 ATASRLADRRGVGIDPADIKARSAAQGLSAEQTFAAEAATGPNAIVVIEGAPGSGKTTTL 469 Query: 450 AELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMA--FTPGSTVIV 507 A +V + G V A R ++QD + + L+ S +IV Sbjct: 470 APIVGAYQAAGHRVIGTATAWRVARAIQQDLNIEARATASWVERLKKGERFLDDKSVLIV 529 Query: 508 DQGEKLSLKETLTLLDGAARHNVQ-VLITDSGQRTGTGS------ALMAMKDAGVNTYRW 560 D+ LS +E LL R + +L+ D Q G+ + +++ V+T Sbjct: 530 DEAGLLSSREMHALLSEVERAQAKAILVGDRRQLQAIGAGPGLDLVVRSVEATRVDTIVR 589 Query: 561 QGGEQRPATIISEPDRNVRYARLA-----------------------GDFAASVKAGEES 597 Q + A A + A + + Sbjct: 590 QRDAWARQAVTDFGTGRANEALDAFQAHGCFEEAPTYRATLQRIVELRNHARAEHPDSFT 649 Query: 598 VAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSP 636 + ++ A +++A+R+ELK +GV+ E ++ A++P Sbjct: 650 LLIARTNKQVADISRAVRAELKREGVIHSAEASVEAVTP 688 Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats. Identities = 90/585 (15%), Positives = 181/585 (30%), Gaps = 111/585 (18%) Query: 873 PVVESKKLAFSMVDLLTEAKSFAAE-GTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLL 931 + + +L+ + + G + + GE++ + G + + G Sbjct: 338 AELTQHESVVDRRELVRSVHAASVGLGLPLSRVDGEVDQLVTSGTFVEI-GRDAIGQVRY 396 Query: 932 VSRASYEAEKSILR---HILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFT 988 + E+ ++ + + + + + + L++ Q A + Sbjct: 397 STPEMIAIERDLVATASRLADRRGVGIDPADIKARSAAQGLSAEQTFAAEAA-TGPNAIV 455 Query: 989 VVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA-GVDAQTLASFL 1047 V++G G GKTT ++ A ++ RV+G R ++ ++A+ AS++ Sbjct: 456 VIEGAPGSGKTTTLAPIVGAY----QAAGHRVIGTATAWRVARAIQQDLNIEARATASWV 511 Query: 1048 HDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIA 1107 + + GE ++ ++DE+ ++ + +M + + +A+ GD QLQAI Sbjct: 512 E----RLKKGERFLDDKSVLIVDEAGLLSSREMHALLSEVERAQAKAILVGDRRQLQAIG 567 Query: 1108 PGQPFRLQQTRSAADVAIMKEIVRQTPEL-REAVYSLINRDVERALSGLESVKPSQVPRQ 1166 G L + + IVRQ R+AV AL + Sbjct: 568 AGPGLDLVVRS--VEATRVDTIVRQRDAWARQAVTDFGTGRANEALDAFQ---------- 615 Query: 1167 EGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQ 1226 A E P TL + R Sbjct: 616 ---------------------------AHGCFEEAPTYRATLQRIVELRNHARAEHPDSF 648 Query: 1227 TLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDA 1286 TL++ N+ ++ + ++ G + + V + G+ R+ + Sbjct: 649 TLLIARTNKQVADISRAVRAELKREGVIHSAEASVEAVTP----SGQTTRIEIAAGDQIR 704 Query: 1287 LVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMR 1346 L ++ + G +T + + +P E + I D Sbjct: 705 FQLRNDQLGVVNGTVA---TVTAVHPDPSKEPSTPGNIRIE--AVIDRRRISFVPADI-- 757 Query: 1347 FTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQ 1406 E+ + AYA T HGAQ Sbjct: 758 ---------------------------------------ADERGRARLGWAYASTVHGAQ 778 Query: 1407 GASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQ 1451 G + A+ L +R +AYVA SR + ++ D Q Sbjct: 779 GMTVDRAVVLLDPRFDRH------AAYVAASRARDETRLVVDRSQ 817 >UniRef50_A4JFK5 ATP-dependent exoDNAse (Exonuclease V) alpha subunit-helicase superfamily I member-like protein n=1 Tax=Burkholderia vietnamiensis G4 RepID=A4JFK5_BURVG Length = 1749 Score = 267 bits (683), Expect = 3e-69, Method: Composition-based stats. Identities = 151/886 (17%), Positives = 295/886 (33%), Gaps = 113/886 (12%) Query: 32 RWAGRGAEQLGLQGSVDKDVFTRLLE-------GRLPDGADLSRMQDGSNRHRPGYDLTF 84 +W G+ A++LGLQ D ++ E G P+ G++ H G+D+TF Sbjct: 119 QWHGKVAQRLGLQDPTDSASLEKMFEQVDQLAKGFAPNTGGEGVHGAGAD-HMIGWDVTF 177 Query: 85 SAPKSVSMMAMLGGD---KRLIDAHNQAVDFAVRQVEALASTRVMTDGQSETVLTGNLVM 141 S K S+M + GGD K + D H++AV + +E G + Sbjct: 178 SMIKPPSIMMVNGGDAIKKEIYDIHHEAVTLVMEFIEKHVIMTRFGQGGKIKSKVEGIAA 237 Query: 142 ALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYR 201 A+F+H SRD +PQLHTH V+ N + V +T + +YA ++A G LYR Sbjct: 238 AMFSHRASRDWDPQLHTHVVLFNAVSA----INPDGEHVWRTIDAKTLYAMKMATGALYR 293 Query: 202 EKLKEQVEALGYETEVVG-KHGMWEMPGVPVEAF---SGRSQTIREAVGE----DASLKS 253 + ++ LG+ E G K + + G P EA S R+ I + + E DA K Sbjct: 294 SHVAKRFAELGFIIERTGKKQDTFTLAGFPTEAVEQASKRAAAIDKLLDEKGLTDAHAKQ 353 Query: 254 RDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDG 313 + +A L TRK K + W G+ ++ + R P + Sbjct: 354 KSLAKLATRKPKDEPPYPELLQHWRDVEGNYGWSPEKTQELLAESRARREAGEVPPFKYD 413 Query: 314 PDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPL 373 + ++E + F +D++ + I + I++ A S +IPL Sbjct: 414 RAA------ILERVTEHEAAFLESDLIH-AIAIESVGHWGIDQVVAEAKAIQSHINVIPL 466 Query: 374 DRE---KGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVP------------RTAG 418 ++ + LFT+ + E ++ + R V ++ Sbjct: 467 QQDAYGRKLFTTPKMLGMEKFIQNRVGVGLADRRHHVPKSLALAHLREYEKKEGLTLKIE 526 Query: 419 YSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQ 478 +A D ++AI+ G G G+ + G V A + + + Sbjct: 527 QREAAVKALSDSGTVAIIKGAAG-TGKTTVAKGIARTFELAGSNVFGTAISSGAAAILGK 585 Query: 479 DERLSGELITGRRQLLEGMAFTPG------------STVIVDQGEKLSLKETLTLLDGAA 526 + + + LE S + VD+ + + L+ Sbjct: 586 EAGIESFTVADLLSRLERGEHKAQGTEPPKLPLGDKSVLFVDESGMIDTRSMHKLMGYQK 645 Query: 527 RHNVQVL-ITDSGQR--TGTGSALMA-------MKDAGVNTYRWQGGEQRPATIISEPDR 576 +++ D+ Q G+ + + A ++ Q E T++ + Sbjct: 646 EIGFKMVWFGDTRQLAPVAAGNVQLTTEANYGHLNSASMSEITRQKEEWMRQTVLRSMNA 705 Query: 577 NVRYARLAGDFAASVKAGEESV----------AQVSGVREQAILTQAIRSELKTQGVLGL 626 R ++ G+ ++ + + ++ + ++ Sbjct: 706 PQRAFKINARGETIDSKGQPTINPAEKIPLYRSLLLTPEQRKAIADLESGAVERYLAQHD 765 Query: 627 PEVTMTALSP-------VWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSH 679 V + A++P L +++R P E D R+ Sbjct: 766 AAVQLVAVAPGGALDAGAELTAKAR--ARALAPVDAPAAQRKEKLPADPESAARINGAIR 823 Query: 680 SLTLRDAQGETQVVRISSLDSSWSLFRPEK------MPVADGERLRVTGKIPGLRVSGGD 733 + ++ ++ + A+GER+R T I L ++ Sbjct: 824 AKLREQGHLGAVDFALTVEKAAPGISDDTSWDGALVRQFAEGERIRFTHPIKELGIARDA 883 Query: 734 RLQVASVSEDAM------------TVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHS 781 + S+ E+++ TV + RA A + T +++G+ Sbjct: 884 MAVIRSLREESISDGRENTTKLIATVQLDARAGVAAQVLDIDLTTHHDIDHGYCVRANPK 943 Query: 782 VSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKL 827 A++ + + + + E A +L Sbjct: 944 ELAE--------SQAVNADLVVEALHRKGRLHIINQKREDEIARRL 981 Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 82/429 (19%), Positives = 137/429 (31%), Gaps = 42/429 (9%) Query: 872 LPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLL 931 L V + AF DL+ + G ++ E A +++ + YG L Sbjct: 418 LERVTEHEAAFLESDLIHAIAIESVGHWGIDQVVAEAKAIQSHINVIPLQQ-DAYGRKLF 476 Query: 932 VSRASYEAEKSILRHI---LEGKEAVMP----LMERVPGELMEKLT--SGQRAATRMILE 982 + EK I + L + +P L E E LT QR A L Sbjct: 477 TTPKMLGMEKFIQNRVGVGLADRRHHVPKSLALAHLREYEKKEGLTLKIEQREAAVKALS 536 Query: 983 TSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM-RSAGVDAQ 1041 S +++G AG GKTT + + + V G + A + + AG+++ Sbjct: 537 DSGTVAIIKGAAGTGKTTVAKGIARTFELA----GSNVFGTAISSGAAAILGKEAGIESF 592 Query: 1042 TLASFLHDTQLQQRSGE------TPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAV 1095 T+A L + + + P ++ +DES M+ M + G + V Sbjct: 593 TVADLLSRLERGEHKAQGTEPPKLPLGDKSVLFVDESGMIDTRSMHKLMGYQKEIGFKMV 652 Query: 1096 ASGDTDQLQAIAPGQP-FRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERAL-- 1152 GDT QL +A G + + A M EI RQ E +RA Sbjct: 653 WFGDTRQLAPVAAGNVQLTTEANYGHLNSASMSEITRQKEEWMRQTVLRSMNAPQRAFKI 712 Query: 1153 -SGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEA 1211 + E++ P A + ++ K + ++ A Sbjct: 713 NARGETIDSKGQPTINPAEKIPLYRSLLLTPEQRKAIADLESGAVERYLAQHDAAVQLVA 772 Query: 1212 IVR-----DYTGRTPEAREQTLI------------VTHLNEDRRVLNSMIHDVREKAGEL 1254 + T +AR + L + E +N I + G L Sbjct: 773 VAPGGALDAGAELTAKARARALAPVDAPAAQRKEKLPADPESAARINGAIRAKLREQGHL 832 Query: 1255 GKEQVMVPV 1263 G + V Sbjct: 833 GAVDFALTV 841 Score = 64.1 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 58/339 (17%), Positives = 107/339 (31%), Gaps = 53/339 (15%) Query: 1140 VYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAML-KG 1198 V + R ++ + ++ E S+++ + +A Q A Sbjct: 859 VRQFAEGERIRFTHPIKELGIARDAMAVIRSLREESISDGRENTTKLIATVQLDARAGVA 918 Query: 1199 EAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNS-MIHDVREKAGELGKE 1257 D+ +T + I Y R + + +N+ ++ + + G L Sbjct: 919 AQVLDIDLTTHHDIDHGYCVRANPKE---------LAESQAVNADLVVEALHRKGRLH-- 967 Query: 1258 QVMVPVLNTANIRDGELRRLSTW----ETHRDALVLVDNVYHRIAGISK-----DDGLIT 1308 ++N + R ++ W + A D R+A K ++ ++ Sbjct: 968 -----IINQKREDEIARRLVTDWLDAVQDWPGAKPGPDGKPQRVAMRDKLMLAGENRSVS 1022 Query: 1309 LQDAEGNTRLISPREAVAEGVTLYTPDT--------IRVGTGDRMRFTKSDRERG----Y 1356 L + L E + PD + G+R+ FTK +R Sbjct: 1023 LLNEIAREELKKRGELRGKDFQFLRPDDGSDLVDRVRSLAVGERIVFTKPLTKRAVGHRI 1082 Query: 1357 VANSVWTVTAV----SGDSVTLS-----DGQQTREIRPGQEQAEQHIDLAYAITAHGAQG 1407 + T+ + GD + + D + + ID Y T H AQG Sbjct: 1083 TNGARATIEDLRLNAKGDVLMRARLDPIDPKAASAVVTINLSEHNAIDHGYGSTIHRAQG 1142 Query: 1408 ASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVY 1446 A+ A AL + M YV LSR + Q Y Sbjct: 1143 ATADKAFALHSS-----AMGDSRWCYVTLSRARFGTQFY 1176 >UniRef50_B2FKA4 Putative conjugal transfer protein TraA n=1 Tax=Stenotrophomonas maltophilia K279a RepID=B2FKA4_STRMK Length = 926 Score = 267 bits (682), Expect = 3e-69, Method: Composition-based stats. Identities = 142/740 (19%), Positives = 257/740 (34%), Gaps = 150/740 (20%) Query: 23 YYVLGSMGER----WAGRGAEQLGLQG-SVDKDVFTRLLEGRLPDGADLSR--------- 68 YY R W G A +L L+G V ++V +L +G P G L + Sbjct: 19 YYAGSGPDPRQTLNWGGSLAAELCLEGQPVTREVMEKLGKGFSPTGRPLCKNAGKEARLV 78 Query: 69 -----------------MQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKR---LIDAHNQ 108 M+ HR G+DLT SAP VS+ L ++ +++AH Q Sbjct: 79 IKTDRWGNVRLDDDGKPMEKWEGGHRVGFDLTISAPGDVSVAFALADEREKLAILEAHRQ 138 Query: 109 AVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ- 167 A A+R +E+ R G+ + T LV A +H ++R+ + LHTH +V V++ Sbjct: 139 ACAVAMRYIESKVEARRGRAGKD-VIDTQGLVWAAADHTSNRNVQCDLHTHHLVFGVSKG 197 Query: 168 HNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGK------- 220 +G W T + +Y ++ A LY+ +L ++ALGY + + Sbjct: 198 EDGRWGTFDA---------IEIYRHRHAADHLYKAELYSAMKALGYGIQREREVDVIGRE 248 Query: 221 --HGMWEMPGVPVEAF---SGRSQTIREAVGEDASLKSRDVAALDTRKSKQHVDPEIKMA 275 + + G+ E R Q I + V E + S D A TRK K+ E + Sbjct: 249 TGQILTTIAGIDRELVLQTKTRRQEILDYVKEHPNA-SHDEACKATRKKKEEPPFEQVVK 307 Query: 276 EWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQ-QAVTQAIAGLSERKVQF 334 +W QT + + A +R DL T G + + + + E + F Sbjct: 308 DWQQT----------FANIARERPDLVPTTQSLKQTQGQHLDPHTFDEVLQRMHENEAMF 357 Query: 335 TYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDRE----------------KG 378 D++ R +G+ E + E ++ L+ + E + Sbjct: 358 CEHDLV-RELGMEFAGQKNAEEILKMVKEFTEQDDLVRVKAEHLHKDDRGTRLARKHRED 416 Query: 379 LFTSGIHVLDELSVRALSRDIMKQNRVTVHPE------------KSVPRTAGYSDAVSVL 426 F + V E + S++ + + + K T A+ L Sbjct: 417 RFCATWMVEWEAEIIRRSKERENETDLKLFRSTVDREIAAYEKRKGFTLTEEQKAAIGHL 476 Query: 427 AQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGEL 486 + ++SG G G+ +G+++ +A ++ ++++ + Sbjct: 477 THGTAGVGVMSGLAG-TGKTTVAEVYKQCFEAEGKQLMGLAVSGKAAAKLEEESGMLCMS 535 Query: 487 ITGR--RQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLI---TDSGQRT 541 + + +A T V++D+ ++ +TL L+ ++++ +D Q Sbjct: 536 VAKFFSQLRQGKVALTKNVVVVLDEAGMVATDDTLKLMTYCQGVGAKLVMQGDSDQLQPI 595 Query: 542 GTGSALM----AMKDAGVNTYRWQ--GGEQRPATIISEPDRNVR---------------- 579 G+ A+ D + R Q G+ A E D + Sbjct: 596 AAGNGFELAKIALGDTKLTEIRRQKNAGDLITANSFYERDHQGKVKDMRRGHRSRQGTLD 655 Query: 580 ------------------------YARLAGDFAASVKAGEESVAQVSGVREQAILTQAIR 615 L D+ +E + E LT IR Sbjct: 656 MGAQTLRNLKERNCIDDFGTEKQAIKALVDDYLKDPTPMDEKLVLAHTRSEVKALTTGIR 715 Query: 616 SELKTQGVLGLPEVTMTALS 635 L+ QGVL E T ++ Sbjct: 716 KGLQEQGVLDKEEFTFRSIV 735 Score = 193 bits (490), Expect = 5e-47, Method: Composition-based stats. Identities = 93/461 (20%), Positives = 158/461 (34%), Gaps = 53/461 (11%) Query: 869 HLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYV-------- 920 L + + F DL+ E A E+ + ++ DL+ V Sbjct: 344 DEVLQRMHENEAMFCEHDLVRELGMEFAGQKNAEEILKMVKEFTEQDDLVRVKAEHLHKD 403 Query: 921 ----DVAKGYGTGLLVSRASYEAEKSILRHILE---------GKEAVMPLMERVPGELME 967 +A+ + + E E I+R E + V + Sbjct: 404 DRGTRLARKHREDRFCATWMVEWEAEIIRRSKERENETDLKLFRSTVDREIAAYEKRKGF 463 Query: 968 KLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTH 1027 LT Q+AA + + V+ G AG GKTT V E+E +++GL + Sbjct: 464 TLTEEQKAAIGHLTHGTAGVGVMSGLAGTGKTT----VAEVYKQCFEAEGKQLMGLAVSG 519 Query: 1028 RAVGEMRS-AGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYAL 1086 +A ++ +G+ ++A F Q R G+ N + +LDE+ MV D + Sbjct: 520 KAAAKLEEESGMLCMSVAKFFS----QLRQGKVALTKNVVVVLDEAGMVATDDTLKLMTY 575 Query: 1087 IAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINR 1146 G + V GD+DQLQ IA G F L + + EI RQ Sbjct: 576 CQGVGAKLVMQGDSDQLQPIAAGNGFELAKIALGDT--KLTEIRRQKN----------AG 623 Query: 1147 DVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPM 1206 D+ A S E +V + L E Sbjct: 624 DLITANSFYERDHQGKVKDMRRGHRSRQGTLDMGAQTLRNLKE------RNCIDDFGTEK 677 Query: 1207 TLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNT 1266 +A+V DY + P ++ L++ H + + L + I ++ G L KE+ + Sbjct: 678 QAIKALVDDYL-KDPTPMDEKLVLAHTRSEVKALTTGIRKGLQEQGVLDKEEFTFRSIVK 736 Query: 1267 ---ANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDD 1304 ++ R+ T+ D L +++ + I KD Sbjct: 737 GQWEDLTLSRRDRVMFTATNND-LGVINGTEGTVESIRKDK 776 Score = 76.0 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 39/253 (15%), Positives = 83/253 (32%), Gaps = 21/253 (8%) Query: 1245 HDVREKAGELGKEQVMVPVLNTAN-----IRDGELRRLSTWETHRDALVLVDNVYHRIAG 1299 R + G L + L N + + + + +D + + + Sbjct: 645 RGHRSRQGTLDMGAQTLRNLKERNCIDDFGTEKQAIKALVDDYLKDPTPMDEKLVLAHTR 704 Query: 1300 ISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVAN 1359 ++ ++ E + + + + DR+ FT ++ + G + Sbjct: 705 SEVKALTTGIRKGLQEQGVLDKEEFTFRSIVKGQWEDLTLSRRDRVMFTATNNDLGVING 764 Query: 1360 SVWTVTAVSGDS-------VTLSDGQQTREIRPGQEQAEQH--IDLAYAITAHGAQGASE 1410 + TV ++ D V + + R + +H + YA+T H AQG + Sbjct: 765 TEGTVESIRKDKSGGYDLVVRIDSSNPKEDGRILKFNTSEHNALAHRYAMTVHKAQGQGK 824 Query: 1411 TFAIALEGTEGNRKLMAGFESAYVALSR-MKQHVQVYTDNR--QGWTDAINNAVQKGTAH 1467 + L G M +SA VA +R K ++YT + + + + K A Sbjct: 825 SEVYHLATNMG----MLDQQSALVAFTRLTKGSYRMYTTDEMMERMAERLGTERHKEMAL 880 Query: 1468 DVFEPKPDREVMN 1480 V + + Sbjct: 881 SVGLSETQAAPVR 893 >UniRef50_C5A9A9 Putative ATP-dependent exoDNAse (Exonuclease V) alpha subunit n=1 Tax=Burkholderia glumae BGR1 RepID=C5A9A9_BURGB Length = 1131 Score = 262 bits (668), Expect = 1e-67, Method: Composition-based stats. Identities = 187/1092 (17%), Positives = 354/1092 (32%), Gaps = 149/1092 (13%) Query: 1 MMSIAQV------RSAGSAGNYYTDKDN-YYVLG-----SMGERWAGRGAEQLGLQGSVD 48 M+++ + ++ + NY+ K+ YYV W G+GAE LGL+G V Sbjct: 1 MLTMIALSPKGHDKNGNNIINYFLAKEARYYVNEVTGKIENQTTWMGKGAEALGLKGEVS 60 Query: 49 KDVFTRLLEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGD-----KRLI 103 ++V LL G+LPDGA G R +D+ +A K+VSM+ + + +I Sbjct: 61 EEVLLNLLNGKLPDGAK-GVQNVGRGGRRAAFDMCATAEKTVSMLMADPTNTPEEREAII 119 Query: 104 DAHNQAVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVA 163 AH +A ++ VE+ RV G +E V ++ A H ++RD +P LH+H +V Sbjct: 120 QAHKRAARMMIKFVESELYARVGAQG-NEIVRNVGMIAAEVTHYSNRDLDPNLHSHYIVM 178 Query: 164 NVTQHNGEWKTLSSDKVGKTGFIEN--VYANQIAFGRLYREKLKEQVEALGYET------ 215 N+ ++ D + EN + A + A G +YR +L +++ LG++ Sbjct: 179 NMVH------SIGPDGKERVTTFENSTLMAIKHAAGAIYRNQLAHEIQELGFQVNKHIQL 232 Query: 216 EVVGKHG---MWEMPGVPVE---AFSGRSQTIREAVGEDASLKSRDVAALDTRKSKQHVD 269 G+ + + G+ E A S R I + + D AA TRK K Sbjct: 233 NAKGRETGDVFFRVAGIDEESRNAHSKRRMDILAYMEAHPEVTE-DQAAERTRKDKDEPS 291 Query: 270 PEIKMAEWMQTLKETGF-DIRAYRDAADQRADLRTLTPGPASQDGPDVQQ--------AV 320 + W + +E + AY+ A + G + Q+ + Sbjct: 292 IQELREIWKREFEERRQRNPNAYQSVAALKNPEVVSNLGHKDMEPVKGQEKQQDMTPKSD 351 Query: 321 TQAIAGLSERKVQFTYTDVLARTVGILPPE---NGVIERARAGIDEAISREQLIPLDREK 377 + + + FT +++ + GV+E+ A +D+A + Sbjct: 352 DEILKTVHVASSLFTRYELMKQVAFEYVGRLDMRGVLEKTNAILDDAKRVLAFEHDPKTG 411 Query: 378 -GLFTSGIHVLDELSVRALSRDIMKQNRVTVHPE-------------KSVPRTAGYSDAV 423 + S V E + + + + + E + A +V Sbjct: 412 VARYASQAMVDLEAGIIKKAAARADEQSIRLTKEQVDAGLAKFQQKNPHLKLNAEQEGSV 471 Query: 424 SVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLS 483 + D AI+SG+ G +A + G+ + ++ ++ ++ + + Sbjct: 472 RYICSDTGGCAIISGRAGTGKTTSFIATKITWEEAGGKLI-GVSESWKAAKKLQSESGVE 530 Query: 484 GELITGRRQLLE--GMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSG--- 538 ++ + + +I+D+ + + + D + ++++ Sbjct: 531 SYSTRTTLHRIKNGKLPLDSKTMLIIDEAGMQTSQSIAEMQDLCDKAGAKLVLMGDHLQL 590 Query: 539 QRTGTGSALMAMK----DAGVNTYRWQGGEQRPATIISEPDRNVRY-------------- 580 Q G GS M+ D + R Q E+ T D Sbjct: 591 QPVGAGSGFRIMQARIKDHALKEIRRQREERDRVTANMLYDERDGQKIFERYLANGHIRT 650 Query: 581 --------ARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSEL------KTQGVLGL 626 A L D+ + GE ++ E + ++R ++ K G+ Sbjct: 651 SETELEARAALVRDYFKTEGQGEPETVKLMVGGELREVDMSVRDKVVFSAGDKALGIHAN 710 Query: 627 PEVTMTA----------LSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTA 676 + A L V + + + + VI Sbjct: 711 DIGVVKAMELNENGEGFLIEVEVTPADLNQKKHTVSIDTSQFNDFNRDYAQTIVICGTNR 770 Query: 677 QSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMP---VADGERLRVTGKIPGLRVSGGD 733 + + +G + + D L ++ VA G+++ T K L VS G+ Sbjct: 771 EVQQMNEDIRKGFKERGLLGE-DQRVRLIVNDEWRQEIVATGDKVLFTEKHDDLGVSNGE 829 Query: 734 RLQVASVSEDA-------MTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVS--- 783 + + +V E VS + + T S Sbjct: 830 GGVITQLRPSDDKQSHIMTIRLVSEIPEQNGRYVSFDTKDCPDVMLAYAGTVHKSQGQSI 889 Query: 784 DSATVFA--SVTQMAMDNATLNGLARS-------GRDVRLYSSLDETRT-----AEKLAR 829 D F + M + + L + R G D L +DE T A+ L Sbjct: 890 DKVLHFVGPAGLHMVNNQSALVAMTRMKTEYGVYGLDEDLLGRIDEDGTRRGGIAQALTE 949 Query: 830 HPSFTVV--SEQIKTRAGET--SLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMV 885 +QI A + + S + + PA LA E ++ A Sbjct: 950 QALNVTTMDVKQITREAAKEIRPQQRGASRRLEPIKIPAHLEAELATSRTEERE-ALKAR 1008 Query: 886 DLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGT-GLLVSRASYEAEKSIL 944 + A+S A R + + G + S A + Sbjct: 1009 GIAQAAESEEASRRRLAGDPQHAADLRARAAVNEREATAAQAQSGFVASMTQLNA-RKAA 1067 Query: 945 RHILEGKEAVMP 956 R E ++ Sbjct: 1068 RAAYEARQKAEA 1079 Score = 186 bits (473), Expect = 5e-45, Method: Composition-based stats. Identities = 119/607 (19%), Positives = 225/607 (37%), Gaps = 55/607 (9%) Query: 882 FSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRG-DLLYVDVAKGYGTGLLVSRASYEAE 940 F+ +L+ + + + NA + +L + G S+A + E Sbjct: 365 FTRYELMKQVAFEYVGRLDMRGVLEKTNAILDDAKRVLAFEHDPKTGVARYASQAMVDLE 424 Query: 941 KSIL---------RHILEGKEAVMPLMERVPGELME-KLTSGQRAATRMILETSDRFTVV 990 I+ + I KE V + + + KL + Q + R I + ++ Sbjct: 425 AGIIKKAAARADEQSIRLTKEQVDAGLAKFQQKNPHLKLNAEQEGSVRYICSDTGGCAII 484 Query: 991 QGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMR-SAGVDAQTLASFLHD 1049 G AG GKTT F A + E +++G+ + +A +++ +GV++ + + LH Sbjct: 485 SGRAGTGKTTSFI----ATKITWEEAGGKLIGVSESWKAAKKLQSESGVESYSTRTTLHR 540 Query: 1050 TQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPG 1109 ++G+ P S T+ ++DE+ M + +A L G + V GD QLQ + G Sbjct: 541 I----KNGKLPLDSKTMLIIDEAGMQTSQSIAEMQDLCDKAGAKLVLMGDHLQLQPVGAG 596 Query: 1110 QPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGA 1169 FR+ Q R +KEI RQ E R+ V + + D E + R Sbjct: 597 SGFRIMQAR--IKDHALKEIRRQREE-RDRVTANMLYDERDGQKIFERYLANGHIRTSET 653 Query: 1170 WAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLI 1229 + + + E + ++ G +V M++ + +V A ++ L Sbjct: 654 ELEARAALVRDYFKTEGQGEPETVKLMVGGELREVDMSVRDKVV-------FSAGDKAL- 705 Query: 1230 VTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIR-DGELRRLSTWETHRDALV 1288 ++ + + + G L + +V LN + + + + +RD Sbjct: 706 --GIHANDIGVVKAMELNENGEGFLIEVEVTPADLNQKKHTVSIDTSQFNDF--NRDYAQ 761 Query: 1289 LVDNVYHRIAGISKDDGLITLQDAEG-NTRLISPREAVAEGVTLYTPDTIRVGTGDRMRF 1347 + I G +++ + +G R + + + V TGD++ F Sbjct: 762 TIV-----ICGTNREVQQMNEDIRKGFKERGLLGEDQRVRLIVNDEWRQEIVATGDKVLF 816 Query: 1348 TKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHID----------LA 1397 T+ + G +T + S R + EQ +++ LA Sbjct: 817 TEKHDDLGVSNGEGGVITQLRPSDDKQSHIMTIRLVSEIPEQNGRYVSFDTKDCPDVMLA 876 Query: 1398 YAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAI 1457 YA T H +QG S + G G M +SA VA++RMK VY + + I Sbjct: 877 YAGTVHKSQGQSIDKVLHFVGPAGLH--MVNNQSALVAMTRMKTEYGVYGLD-EDLLGRI 933 Query: 1458 NNAVQKG 1464 + + Sbjct: 934 DEDGTRR 940 >UniRef50_Q0BRZ0 TraI protein (DNA helicase I) n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BRZ0_GRABC Length = 571 Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats. Identities = 146/522 (27%), Positives = 217/522 (41%), Gaps = 56/522 (10%) Query: 1 MM--SIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEG 58 MM +I+ + SAG A +YY D Y G W G+GA+ L L G+VD + F RLLEG Sbjct: 1 MMVATISALTSAGQAASYYEADDYYAEGGLAPSEWLGQGAQVLDLAGAVDHEQFARLLEG 60 Query: 59 RLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVE 118 + G L M++G HRPG+D+TFSAPKSVS+MA + GD+RLI H +AV A+ E Sbjct: 61 HV-AGQSLGTMREGEWEHRPGWDVTFSAPKSVSIMAEVAGDRRLIAVHERAVKTALGLAE 119 Query: 119 AL-ASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH-NGEWKTLS 176 +TR+ DG TGNLV+A F H TSR +PQLHTH V+ N+T+ G+W++L Sbjct: 120 QHFTATRLREDGSIRREATGNLVIASFRHGTSRALDPQLHTHNVILNMTRDKAGQWRSLE 179 Query: 177 SDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGV---PVEA 233 Y Q G +YR++L +V+ LGY E GK +E+ G+ +EA Sbjct: 180 ---------PRAFYQMQKLMGAVYRQELAAEVQRLGYAIER-GKDSTFEIAGIGTETLEA 229 Query: 234 FSGRSQTIREAVGE------DASLKSRDVAAL----------DTRKSK-QHVDPEIKMAE 276 FS RS I + E AS + VAAL DTR+++ + + + Sbjct: 230 FSQRSAAIEARLAERGKSRDQASAAEKQVAALDAGGGRVIECDTREARFAQIAQDYASLD 289 Query: 277 WMQTLKETGFD-----IRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERK 331 + K + R GP + V + +T+A A + Sbjct: 290 TKERRKALVIEPSREGRDVLTKEIRHRLAENGALHGPTVETARLVPRDLTRAEAKDAHSY 349 Query: 332 V-----QFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLD------REKGLF 380 +F I+ +A + A I F Sbjct: 350 AIGDTIRFAKDYADKGVSKAQAYRVVGIDTKKAALTLADQHGGAIDWRLRQWGASHSQAF 409 Query: 381 TSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQG 440 TS + L +R+ R+ + + +A LA+ + + Sbjct: 410 TSEVIELRAGDQVQFTRNDRVLGRINGQQGEVIAVDPATREAKVQLARGKIETLALD--- 466 Query: 441 GAAGQRERVAELVMMAREQGREVQ--IIAADRRSQMNMKQDE 480 Q + + QGR + I AD + + Q Sbjct: 467 NPRDQHIAHSYVATAFAAQGRTAERTFIHADSAATNLLDQKS 508 Score = 181 bits (458), Expect = 3e-43, Method: Composition-based stats. Identities = 83/386 (21%), Positives = 134/386 (34%), Gaps = 22/386 (5%) Query: 1125 IMKEIVRQ--TPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHS 1182 +M + RQ E++ Y++ + + Q A Sbjct: 189 LMGAVYRQELAAEVQRLGYAIERGKDSTFEIAGIGTETLEAFSQRSAAIEARLAERGKSR 248 Query: 1183 QEAKLAEAQQKAMLKGEAFP---DVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRV 1239 +A AE Q A+ G D + I +DY + R + L++ E R V Sbjct: 249 DQASAAEKQVAALDAGGGRVIECDTREARFAQIAQDYASLDTKERRKALVIEPSREGRDV 308 Query: 1240 LNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVY----- 1294 L I + G L V L ++ E + ++ D + + Sbjct: 309 LTKEIRHRLAENGALHGPTVETARLVPRDLTRAEAKDAHSYAIG-DTIRFAKDYADKGVS 367 Query: 1295 ----HRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKS 1350 +R+ GI +TL D G R+ A +T + I + GD+++FT++ Sbjct: 368 KAQAYRVVGIDTKKAALTLADQHGGAIDWRLRQWGASHSQAFTSEVIELRAGDQVQFTRN 427 Query: 1351 DRERGYVANSVWTVTAVSG--DSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGA 1408 DR G + V AV + + E +QHI +Y TA AQG Sbjct: 428 DRVLGRINGQQGEVIAVDPATREAKVQLARGKIETLALDNPRDQHIAHSYVATAFAAQGR 487 Query: 1409 SETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDA-INNAVQKGTAH 1467 + + + +S YVALSR K VYT++R A + A K TA Sbjct: 488 TAERTF--IHADSAATNLLDQKSFYVALSRAKDTTAVYTNDRGKLVGALLERAGLKQTAL 545 Query: 1468 --DVFEPKPDREVMNAERLFSTAREL 1491 + P R N + + S L Sbjct: 546 APQLTGGMPSRAEQNRKAVASHGVAL 571 Score = 111 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 89/280 (31%), Gaps = 10/280 (3%) Query: 568 ATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVRE-QAILTQAIRSELKTQGVLGL 626 +I R R+A++A D+A+ + RE + +LT+ IR L G L Sbjct: 266 GRVIECDTREARFAQIAQDYASLDTKERRKALVIEPSREGRDVLTKEIRHRLAENGALHG 325 Query: 627 PEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQ----WNPETRSHDRYVIDRVTAQSHSLT 682 P V L P L Y G + + Y + + + +LT Sbjct: 326 PTVETARLVPRDLTRAEAKDAHSYAIGDTIRFAKDYADKGVSKAQAYRVVGIDTKKAALT 385 Query: 683 LRDAQGETQVVRISSLDSS-WSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVS 741 L D G R+ +S F E + + G++++ T L G + +V +V Sbjct: 386 LADQHGGAIDWRLRQWGASHSQAFTSEVIELRAGDQVQFTRNDRVLGRINGQQGEVIAVD 445 Query: 742 EDAMTV-VVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAM--- 797 V R + TL + + + + T + + Sbjct: 446 PATREAKVQLARGKIETLALDNPRDQHIAHSYVATAFAAQGRTAERTFIHADSAATNLLD 505 Query: 798 DNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVS 837 + L+R+ +Y++ L R Sbjct: 506 QKSFYVALSRAKDTTAVYTNDRGKLVGALLERAGLKQTAL 545 >UniRef50_B2I3X3 TrwC protein n=1 Tax=Acinetobacter baumannii ACICU RepID=B2I3X3_ACIBC Length = 716 Score = 255 bits (651), Expect = 1e-65, Method: Composition-based stats. Identities = 113/330 (34%), Positives = 167/330 (50%), Gaps = 32/330 (9%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSM---GERWAGRGAEQLGLQGS-VDKDVFTRLL 56 M+S+ V +G A +YY DNYY W GRGA+ LG+ G ++ ++F LL Sbjct: 1 MLSVNNVVESGKALSYY-QLDNYYTNEQQSLDQTEWYGRGAQVLGINGEQIEANIFKDLL 59 Query: 57 EGRLPDGADLSRMQDGSNR-----HRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVD 111 EGR+ D L R++ N HR G DLTFSAPKSVS+MA + ++ ++ AH AV Sbjct: 60 EGRVED-QQLGRVRKDENGQSYIDHRAGIDLTFSAPKSVSIMAEVFENQDVLQAHLDAVK 118 Query: 112 FAVRQVEAL-ASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNG 170 + +E TR+ DG + + NLV+ALFNH+TSR +PQ HTHAVV N+T ++ Sbjct: 119 DTISAIEDHYTQTRISVDGTIQKSESDNLVVALFNHNTSRALDPQTHTHAVVMNMTLNDK 178 Query: 171 E-WKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGV 229 + W LS+ E +Y NQ G +Y L + + A+G + EV G +E+ G Sbjct: 179 DSWTALSN---------EVIYDNQATIGSIYNSNLAQNLRAIGLDVEVKDNQGNFEIAGF 229 Query: 230 P---VEAFSGRSQTIREAVG------EDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQT 280 ++ FS R I E++ EDA R+ AAL TR+ KQ + W + Sbjct: 230 TPEMIQEFSQRRTQIIESLKSRGIDIEDAPASLREQAALKTRERKQAFNEAELRQVWKER 289 Query: 281 LKETGFDIRAYRDAADQRADLRTLTPGPAS 310 E G +++ D + + + P Sbjct: 290 ASELGIT-QSFVDKLEDKIKTNQMNADPQP 318 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 77/329 (23%), Positives = 134/329 (40%), Gaps = 25/329 (7%) Query: 819 DETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESK 878 DE R +K + +Q R Q+ + ++A++ A+ + Sbjct: 397 DEGRLGKKQTEPKASNNSKDQTVPR-ERPYQRKNRESQQVLISQKTKEAVYYAIGHHTER 455 Query: 879 KLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYE 938 ++ +L A F + ++ E+N K ++ VD G L ++ Sbjct: 456 EMMIPETKILNTAMKFDIQEVTHEQVRAELNRLEKEKIIVRVD-------GKLTTQRLAH 508 Query: 939 AEKSILRHILEGKEAVMPL---------MERVPGELMEKLTSGQRAATRMILETSDRFTV 989 +E L+HI +++V P+ +++ K T GQRA+ I + R+ Sbjct: 509 SEVWSLQHIQNEQKSVSPIVDESQVKTRLDQEEQLRGRKFTPGQRASLETIFSSESRYIG 568 Query: 990 VQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMR-SAGVDAQTLASF-- 1046 V G AG GKTT +N + V G+ T A + G+ ++T+A F Sbjct: 569 VDGLAGTGKTTML----HTLNKVASENGFIVKGMAATGVAAKNLELETGIPSKTMAMFQI 624 Query: 1047 -LHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQA 1105 ++ Q + + N ++++DESS V T+ L R V GD QLQ+ Sbjct: 625 KENELQKEIEKNGGVNRKNEIWIVDESSFVSQTNFKDILTLAKQANSRVVFLGDKLQLQS 684 Query: 1106 IAPGQPFRLQQTRSAADVAIMKEIVRQTP 1134 I+ G+PF L Q R + M +I+RQ Sbjct: 685 ISAGKPFELVQNRGVLKTSQMHDIIRQKK 713 Score = 101 bits (250), Expect = 4e-19, Method: Composition-based stats. Identities = 52/336 (15%), Positives = 107/336 (31%), Gaps = 37/336 (11%) Query: 252 KSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDA--------ADQRADLRT 303 K R +A L + K+ + +Q G + + +R R Sbjct: 369 KIRAIAPLSGKSQKEPETQNMGQEAHIQDEGRLGKKQTEPKASNNSKDQTVPRERPYQRK 428 Query: 304 LTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDE 363 ++AV AI +ER++ T +L + + E+ RA ++ Sbjct: 429 NRESQQVLISQKTKEAVYYAIGHHTEREMMIPETKILNTAMK-FDIQEVTHEQVRAELNR 487 Query: 364 AISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPR-------- 415 + ++ +D + T+ E+ ++ K V + R Sbjct: 488 LEKEKIIVRVDGK---LTTQRLAHSEVWSLQHIQNEQKSVSPIVDESQVKTRLDQEEQLR 544 Query: 416 ----TAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRR 471 T G ++ + V G G G+ + L +A E G V+ +AA Sbjct: 545 GRKFTPGQRASLETIFSSESRYIGVDGLAG-TGKTTMLHTLNKVASENGFIVKGMAATGV 603 Query: 472 SQMNMKQDERLSGELITGRRQLLEGMAF---------TPGSTVIVDQGEKLSLKETLTLL 522 + N++ + + + + + + IVD+ +S +L Sbjct: 604 AAKNLELETGIPSKTMAMFQIKENELQKEIEKNGGVNRKNEIWIVDESSFVSQTNFKDIL 663 Query: 523 DGAARHNVQVLITDSG---QRTGTGSALMAMKDAGV 555 A + N +V+ Q G +++ GV Sbjct: 664 TLAKQANSRVVFLGDKLQLQSISAGKPFELVQNRGV 699 >UniRef50_A8ZPA5 TrwC protein, putative n=1 Tax=Acaryochloris marina MBIC11017 RepID=A8ZPA5_ACAM1 Length = 657 Score = 253 bits (645), Expect = 5e-65, Method: Composition-based stats. Identities = 94/348 (27%), Positives = 161/348 (46%), Gaps = 32/348 (9%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRL 60 M+S ++V S G+Y+ +D W G+GA++LGL G V + + G Sbjct: 1 MISNSKV-SGRGLGHYHARED----GQEAPGHWIGQGAKELGLNGEVKRADLEAVAHGTA 55 Query: 61 PDGADLS------RMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAV 114 P+G L R N HR G D TFS PKSVS++ ++GGDKR+I+AH AV + Sbjct: 56 PNGMRLKAKRSQWRQGSYRNGHRAGTDATFSPPKSVSIIGLVGGDKRVIEAHEHAVLDTL 115 Query: 115 RQVEALAS-TRVMTDGQSETVLTGNLVMALFNHDTSRDQE-----PQLHTHAVVANVTQH 168 +++E S ++ T G +TG L++A F+H T+R + PQ+HTH+++ N T+ Sbjct: 116 KEIEETCSIAKIRTGGIRRNEVTGKLIIAKFDHRTTRPNDQGIPMPQIHTHSLIFNSTKC 175 Query: 169 -NGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMP 227 +G+W++L + K +T ++ R Y L E+++ +GY + +++ Sbjct: 176 KDGKWRSLENWKFFRT--------DKKRLRRHYINGLGERLKEIGYRIKSERDGLHFQVE 227 Query: 228 GVPVE---AFSGRSQTIREAVGEDAS---LKSRDVAALDTRKSKQHVDPEIKMAEWMQTL 281 G+ A+S R++ I +GE A+ K AAL TR K + E +W + Sbjct: 228 GITRSQELAYSERTKEIERELGESANGVRYKKGRFAALKTRNPKVPFEHERVHKQWKEMA 287 Query: 282 KETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSE 329 G ++ T + + ++ + E Sbjct: 288 YREGIAFDRVPGLVRTPKEIPLPTRVRLELKCLQISHRIKAQVSRVHE 335 >UniRef50_C0E195 Putative uncharacterized protein n=1 Tax=Corynebacterium matruchotii ATCC 33806 RepID=C0E195_9CORY Length = 1433 Score = 248 bits (632), Expect = 2e-63, Method: Composition-based stats. Identities = 164/1021 (16%), Positives = 314/1021 (30%), Gaps = 158/1021 (15%) Query: 60 LPDGADL----SRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDK---RLIDAHNQAVDF 112 P G D+ ++ Q + G+D TFS KSVS++ L K ++ + H++AV Sbjct: 160 NPSGDDIVSWINKQQSKVRQAAAGFDWTFSPTKSVSVLWALADKKTANKIEECHHKAVQE 219 Query: 113 AVRQVEA-LASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ-HNG 170 A+ E + TR+ T+G + V T L+ A F H +R +P LH+H +V+N Q +G Sbjct: 220 ALSWAEKNVIYTRIGTNG-IQQVTTQGLIAAEFTHFDTRTGDPDLHSHVLVSNKVQAPDG 278 Query: 171 EWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQV-EALGYETEVVGKHG----MWE 225 W TL S + V+ N + Y L E + +G E + G +WE Sbjct: 279 RWLTLDS---------QEVFRNAQSISARYDTALMEILSREMGLTFEPSQREGESTPVWE 329 Query: 226 MPGVP---VEAFSGRSQTIR---------------EAVGEDASLKSRDVAALDTRKSKQH 267 + GVP + FS R + R + + +K + A L TR +K+ Sbjct: 330 IAGVPQYLISLFSSRREQARPVFDQLVADYSKQHDKQPDKITKIKLWEKAILQTRDAKKP 389 Query: 268 VDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQ----A 323 ++ E + + DG Q++V Q A Sbjct: 390 AQSLGQLRENWAIRVQGLDHGDELLQQIQEVVANPEGDQRQVFGDGKKWQESVEQVAEIA 449 Query: 324 IAGLSERKVQFTYTDV------------LARTVGILPPENGVIERARAGIDEAISREQLI 371 +A ++ ++ F V + E +++ ++S +++ Sbjct: 450 LANVTSKRGVFGDHHVRTAVFTELKGWKFHNAAELAKAETQIVDYILEQKVVSLSPGEVL 509 Query: 372 PLDRE--------------KGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVP--- 414 L + +T+ + E V + +K++ Sbjct: 510 DLPSRLLGDNALGVDRRVGRNRYTTQEILNAEQLVLDSCTEPTPYTAPNRDIDKALAGHE 569 Query: 415 ------RTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAA 468 G L ++ G G G+ + + + + QGR V +A Sbjct: 570 KAHGWTLNEGQEAMARSLLTTGALVSCGVGPAG-TGKTTSMQIVSKVWKNQGRNVIGLAP 628 Query: 469 DRRSQMNMKQDERLSGELITGRRQLLEGMAFT--------------PGSTVIVDQGEKLS 514 ++ + ++ I G PG ++VD+ S Sbjct: 629 SAQAASVLGEEIGCEATTIDKLTFTWRGQHSKLPGHDLDALEIKIQPGDMLLVDEAGMAS 688 Query: 515 LKETLTLLDGAARHNVQV-LITDSGQRTGTGS------------ALMAMK----DAGVNT 557 + L++ A V +I D Q + GS A+ + G +T Sbjct: 689 TQNLAALVEIAKESGAVVRMIGDPHQLSAVGSGGLFNSACQITDAVELTEVMRFSGGKDT 748 Query: 558 YRWQGGEQRPA------------TIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVR 605 + + +S R D+ + G +S+ S Sbjct: 749 EQADASLKIRKGDKSGLDVYEQREWVSGGTRQDMVDSAVADYLNDIARGRKSLIVASTNA 808 Query: 606 EQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDS---RSRYLRDMYRPGMVMEQWNPE 662 + + Q +R+ + G + V +R + YR + Sbjct: 809 DVDRMNQQVRAYRISIGEVDDKHHMRVGRGDVIGVGDIVITRQNKQFYRKVQGKNTVIGK 868 Query: 663 TRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTG 722 + + + + G+ QV+ + L + A G + V Sbjct: 869 VMNGQLFTVVGLQRDGDVEVKDLKTGKRQVIPADYAAENMHLGYAATVHRAQGATVDVCR 928 Query: 723 KIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLP-VSDSPFTALKLENGW-VETPGH 780 + +V + V + + V+++ F + + + Sbjct: 929 AVVDQ-----------AVDRAGLYVALSRGKKENRAYCVTEADFDFDAEDMHYHMGGHDD 977 Query: 781 SVSDSATVFASVTQMAMDNATLNGLAR-------SGRDVRLYSSLDETRTAEKLARHPSF 833 V + + +A+ S V+ LA H Sbjct: 978 GELTPRKVLEQALAKDNRSRSATEIAQQELADSMSRDRVQALYVHGCDLARSALAEH--- 1034 Query: 834 TVVSEQIKTRAGETSLETAIS-HQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAK 892 V + + SL+ + +AL + I + ++ K FS D+ E Sbjct: 1035 -VRTSLVDALPNGVSLDADATWRIDTALKRVIENGIDVQNLTLDELKPDFSADDMGAEIA 1093 Query: 893 SFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKE 952 S + + I RG L D A+ + R + ++ R G Sbjct: 1094 SCINRQYNQEAVISAVRDNIVRG--LPDDTAQKLASE---DRGVAHIDAALARMADAGVH 1148 Query: 953 A 953 A Sbjct: 1149 A 1149 Score = 176 bits (446), Expect = 7e-42, Method: Composition-based stats. Identities = 110/664 (16%), Positives = 203/664 (30%), Gaps = 140/664 (21%) Query: 812 VRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLA 871 +R+ +++ + ++ G+ E+ + AL + Sbjct: 402 IRVQGLDHGDELLQQIQEVVANPEGDQRQVFGDGKKWQESVEQVAEIALANVTSKRGVFG 461 Query: 872 LPVVESKKLAFSMVD---LLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVD------- 921 V + F+ + A+ AE + + + G++L + Sbjct: 462 DHHV--RTAVFTELKGWKFHNAAELAKAETQIVDYILEQKVVSLSPGEVLDLPSRLLGDN 519 Query: 922 ---VAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMP------LMERVPGELMEKLTSG 972 V + G ++ AE+ +L E P + L G Sbjct: 520 ALGVDRRVGRNRYTTQEILNAEQLVLDSCTEPTPYTAPNRDIDKALAGHEKAHGWTLNEG 579 Query: 973 QRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGE 1032 Q A R +L T + G AG GKTT V+ + +++ V+GL P+ +A Sbjct: 580 QEAMARSLLTTGALVSCGVGPAGTGKTTSM----QIVSKVWKNQGRNVIGLAPSAQAASV 635 Query: 1033 M-RSAGVDAQTLASFLHDTQLQQRSGETPDFS--------NTLFLLDESSMVGNTDMARA 1083 + G +A T+ + Q D + L+DE+ M ++A Sbjct: 636 LGEEIGCEATTIDKLTFTWRGQHSKLPGHDLDALEIKIQPGDMLLVDEAGMASTQNLAAL 695 Query: 1084 YALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSL 1143 + G GD QL A+ G F D + E++R Sbjct: 696 VEIAKESGAVVRMIGDPHQLSAVGSGGLFNSA--CQITDAVELTEVMR----------FS 743 Query: 1144 INRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPD 1203 +D E+A + L+ ++ L +Q+ + G D Sbjct: 744 GGKDTEQADASLK----------------------IRKGDKSGLDVYEQREWVSGGTRQD 781 Query: 1204 VPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPV 1263 + ++ V DY R+ LIV N D +N Sbjct: 782 ----MVDSAVADYLNDIARGRKS-LIVASTNADVDRMNQ--------------------Q 816 Query: 1264 LNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPRE 1323 + I GE+ R ++ V ++ + + +G +I Sbjct: 817 VRAYRISIGEVDDKHHMRVGRGDVIGVGDI------VITRQNKQFYRKVQGKNTVIG--- 867 Query: 1324 AVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDS-VTLSDGQQTRE 1382 + ++TV + D V + D + + Sbjct: 868 -------------------------------KVMNGQLFTVVGLQRDGDVEVKDLKTGKR 896 Query: 1383 IRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQH 1442 + A +++ L YA T H AQGA+ A+ +R + YVALSR K+ Sbjct: 897 QVIPADYAAENMHLGYAATVHRAQGATVDVCRAVVDQAVDRAGL------YVALSRGKKE 950 Query: 1443 VQVY 1446 + Y Sbjct: 951 NRAY 954 >UniRef50_P55418 Probable conjugal transfer protein traA n=16 Tax=Rhizobiaceae RepID=TRAA_RHISN Length = 1102 Score = 247 bits (629), Expect = 4e-63, Method: Composition-based stats. Identities = 171/935 (18%), Positives = 292/935 (31%), Gaps = 173/935 (18%) Query: 805 LARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPA 864 LA +G D+R+ E + E L V ++ I+ +A ++ + A Sbjct: 206 LALAGLDIRIDGRSFEKQGIE-LTPTIHLGVGTKAIERKATTDDQAVSLERLELQEEKRA 264 Query: 865 QQAIHL------ALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLL 918 + A + L ++ +K F D+ + + F L I K L Sbjct: 265 ENARRIQRRPEIVLDLITREKSVFDERDVAKILHRYIDDPGVFHSLMARILQSPKTLRLE 324 Query: 919 YVDVAKGYGTG---LLVSRASYEAEKSI----LRHILEGKEAVMPLMERVPGELMEKLTS 971 +A G +R E + + V + +L+ Sbjct: 325 RERIAFATGIRAPAKYTTRELIRLEAEMGSRAIWLSRRSSHGVRKEVLEAAFSRHSRLSD 384 Query: 972 GQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVG 1031 Q+ A + ++R V G AG GKTT +A A E+ RVVG +A Sbjct: 385 EQKTAIEHV-AGAERIAAVIGRAGAGKTTMMKAAREA----WEAAGYRVVGGALAGKAAE 439 Query: 1032 EMR-SAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAG 1090 + AG+ ++TL+S+ +L+ G T+F+LDE+ MV + MA Sbjct: 440 GLEKEAGIASRTLSSW----ELRWNEGRKQLDDKTIFVLDEAGMVSSRQMALFVETATKA 495 Query: 1091 GGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELR-EAVYSLINRDVE 1149 G + V GD +QLQ I G FR R A ++ I RQ + +A L +V Sbjct: 496 GAKLVLVGDPEQLQPIEAGAAFRAIADRIG--YAELETIYRQREQWMCDASLDLARGNVG 553 Query: 1150 RALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLY 1209 + + + M++ E + L Sbjct: 554 KVVDTYRANGR----------------------------------MMRSELKAEAVQNLI 579 Query: 1210 EAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANI 1269 RDY + + TLI+ HL D R+LN M + G + Sbjct: 580 ADWDRDY-----DPTKTTLILAHLRRDVRMLNQMARAKLVERGIV--------------- 619 Query: 1270 RDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGV 1329 D + + +GN R Sbjct: 620 ----------------------------------DAGFSFKAEDGN------RRFAPGDQ 639 Query: 1330 TLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQ 1389 ++ + +G + MR + + + + V R + + Sbjct: 640 IVFLKNEGALGVKNGMRGKVVEAAQNRIVAEIGEVE--------------HRRQVMVESR 685 Query: 1390 AEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDN 1449 ++D YA T H +QGA+ L +R L YVA++R ++ + VY Sbjct: 686 FYNNLDHGYATTIHKSQGATVDRVKVLASLSLDRHLT------YVAMTRHREDLGVYYGA 739 Query: 1450 R-----QGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLR-- 1502 R G ++ K T D + R+ + F+ AR + V R + R Sbjct: 740 RSFAKSGGLIQILSQKNSKETTLDYEKATFYRQALR----FAEARGMHLVNVARTIARDR 795 Query: 1503 -----QAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGK-----SAGIWLNPLTTDD-- 1550 + D R +A G ++ A +N K AGI P + + Sbjct: 796 LEWTVRQKQKLADLTQRLVAIGARFGLAVGAKTTNSQNLKETRPMVAGIATFPKSMEQAV 855 Query: 1551 GNGLRGFSGEGRVKGSGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIAGE 1610 + L G + +F + E D + S + Sbjct: 856 ADRLEVDPGLKKQWEDVSTRFHLVY--TQPEVAFKAVNVDAMLKDETVAKSALSNMANQP 913 Query: 1611 GRPWNPGAITG--GRVWGDIPDNSVQPGAGNGEPVTAEVLAQRQAEEAIRRETERRADEI 1668 + TG + ++ + QR E + E Sbjct: 914 ESYGSLKGKTGLLASRADKQDRERAERNVPALAQSLSDYMRQRSRAEQCYQADELAVR-- 971 Query: 1669 VRKMAENKPDLPDG--KTEQAVREIAGQERDRAAI 1701 RK+A P L G +T + VR+ + AA+ Sbjct: 972 -RKVAIEIPALSPGARQTLERVRDAIDRNDLPAAL 1005 Score = 102 bits (253), Expect = 2e-19, Method: Composition-based stats. Identities = 82/629 (13%), Positives = 201/629 (31%), Gaps = 99/629 (15%) Query: 281 LKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVL 340 + + +A D + L +++ +Q+ + ++ K F DV Sbjct: 235 VGTKAIERKATTDDQAVSLERLELQEEKRAENARRIQRRPEIVLDLITREKSVFDERDV- 293 Query: 341 ARTVGILPPENGVIERARAGIDEAISREQLIPLDREK----------GLFTSGIHVLDEL 390 A+ + + GV A I + + + L+RE+ +T+ + E Sbjct: 294 AKILHRYIDDPGVFHSLMARI---LQSPKTLRLERERIAFATGIRAPAKYTTRELIRLEA 350 Query: 391 SVRALSRDIMKQNRVTVHPE-------KSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAA 443 + + + + +++ V E + + A+ +A +A V G+ G A Sbjct: 351 EMGSRAIWLSRRSSHGVRKEVLEAAFSRHSRLSDEQKTAIEHVA-GAERIAAVIGRAG-A 408 Query: 444 GQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITG--RRQLLEGMAFTP 501 G+ + G V A ++ ++++ ++ ++ R Sbjct: 409 GKTTMMKAAREAWEAAGYRVVGGALAGKAAEGLEKEAGIASRTLSSWELRWNEGRKQLDD 468 Query: 502 GSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSG---QRTGTGSALMAMKD----AG 554 + ++D+ +S ++ ++ A + ++++ Q G+A A+ D A Sbjct: 469 KTIFVLDEAGMVSSRQMALFVETATKAGAKLVLVGDPEQLQPIEAGAAFRAIADRIGYAE 528 Query: 555 VNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAI 614 + T Q + + NV V R + Sbjct: 529 LETIYRQREQWMCDASLDLARGNVGK-------------------VVDTYRANGRMM--- 566 Query: 615 RSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRV 674 RSELK + ++ W+ + + Sbjct: 567 RSELKAE-----------------------------AVQNLIADWDRDYDPTK--TTLIL 595 Query: 675 TAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEK--MPVADGERLRVTGKIPGLRVSGG 732 + + + ++V +D+ +S F+ E A G+++ L V G Sbjct: 596 AHLRRDVRMLNQMARAKLVERGIVDAGFS-FKAEDGNRRFAPGDQIVFLKNEGALGVKNG 654 Query: 733 DRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASV 792 R +V +++ + + + V + L++G+ T S + + Sbjct: 655 MRGKVVEAAQNRIVAEIGEVEHRRQVMVESRFYN--NLDHGYATTIHKSQGATVDRVKVL 712 Query: 793 TQMAMDNA-TLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLET 851 +++D T + R D+ +Y A A+ + Q ++ E Sbjct: 713 ASLSLDRHLTYVAMTRHREDLGVYYG------ARSFAKSGGLIQILSQKNSKETTLDYEK 766 Query: 852 AISHQKSALHTPAQ--QAIHLALPVVESK 878 A ++++ A+ +++A + + Sbjct: 767 ATFYRQALRFAEARGMHLVNVARTIARDR 795 >UniRef50_A1RCJ2 Putative TraA-like conjugal transfer protein n=1 Tax=Arthrobacter aurescens TC1 RepID=A1RCJ2_ARTAT Length = 1158 Score = 245 bits (626), Expect = 1e-62, Method: Composition-based stats. Identities = 145/761 (19%), Positives = 239/761 (31%), Gaps = 161/761 (21%) Query: 20 KDNYYVLGSMGERWAGRGAEQLGLQG-SVDKDVFTRLL-EGRLPDGADLSRMQ------- 70 + Y G+ W GRGAEQLGL G V +D L GR PDG Sbjct: 33 AEYYVARGNPPGVWTGRGAEQLGLAGTEVSEDQMRALFGAGRHPDGVHRLGAAYPSYATL 92 Query: 71 -----------------------------------DGSNRHRPGYDLTFSAPKSVSMMAM 95 R G+DL F+ KS S++ Sbjct: 93 APYQQRVAERLAEWESLNGRPPSAAERNRIAAVEARRGRRAVAGFDLVFTPVKSASVLWA 152 Query: 96 LGGDK---RLIDAHNQAVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQ 152 LGG + + DAH++AV ++ +E+ A+ + G + L+ A+F+H SR Sbjct: 153 LGGAEVRGAVEDAHHEAVLSSLGWLESHAAYTRVGRGGVAQIDATGLICAMFDHRESRAG 212 Query: 153 EPQLHTHAVVANVTQH-NGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQV-EA 210 +P LHTH VAN +G+W++L + +YA +A Y + ++ + Sbjct: 213 DPDLHTHVAVANKVCGVDGKWRSLDA---------RGLYALGVAASERYNTRFEDALARR 263 Query: 211 LGYET-----EVVGKHGMWEMPGVPVE---AFSGRSQTIREAVGE--------------- 247 LG E + E+ GVP E FS R I + E Sbjct: 264 LGVEFVERPSNRRDLRPVREIDGVPAELLRHFSQRRAAIEDRYAELRRNYRATHGREPDR 323 Query: 248 DASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPG 307 ++ A L+TR++K +AE + + R +D Sbjct: 324 ATQIQLAQQATLETREAK---GAARSLAEQVTDWTTQARQLIGARRLDRLASDCMGRERS 380 Query: 308 PASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIER-----ARAGID 362 + D PDV + +Q + ++E++ +T +V A T L RA +D Sbjct: 381 AGAADVPDVDELASQIVGTIAEQRSTWTVWNVHAETERTLRRYWFATADERELVTRAVVD 440 Query: 363 EAISREQLIPLDR-----------------------EKGLFTSGIHVLDELSVRALSRDI 399 A I + +T+ ++ E + A +R Sbjct: 441 RATGSHHSIRITEPEFVREAPELIRASDGVSMFRAHGSDRYTTSEVMIAEDELIAAARST 500 Query: 400 ---------MKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVA 450 ++ + G V A + + G G AG+ + Sbjct: 501 DGPRVDPHSLQAGLAIHEARTGLVLDRGQRGLVEAFACSSARIVVGIGPAG-AGKTTAMR 559 Query: 451 ELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRR-------------QLLEGM 497 + G V +A R+ + + + E + Sbjct: 560 AFAATWQADGGRVIPLATSSRAAHVLGAELEMRAENLHKFLFEHHRANDRESSDLADRWF 619 Query: 498 AFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQV-LITDSGQRTG--TGSALMAMKDAG 554 G V+VD+ LL A V L+ D Q G AL +++ Sbjct: 620 QLGAGDVVLVDEAGMAGTLHLHQLLRIATEAGATVRLLGDPAQLAAVDAGGALNLLEEET 679 Query: 555 ----VNTYRWQGGEQRPATIISEP----------DRNVRYARLAGD---------FAASV 591 + T ++ D R A + D +A V Sbjct: 680 GATYLTTLHRFTDPAEGDATLALRRGNPKAVTFYDDRDRIAAGSRDAMLEAAYDHWACDV 739 Query: 592 KAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMT 632 +AG+ SV + + L R E G + V + Sbjct: 740 RAGKRSVLIAATTGDVNALNARARLERALAGQIEADGVVLH 780 Score = 129 bits (325), Expect = 7e-28, Method: Composition-based stats. Identities = 97/598 (16%), Positives = 186/598 (31%), Gaps = 87/598 (14%) Query: 767 ALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRT-AE 825 +L + T G + + + V +++ A Sbjct: 306 YAELRRNYRATHGREPDRATQIQLAQQATLETREAKGAARSLAEQVTDWTTQARQLIGAR 365 Query: 826 KLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKK------ 879 +L R S + E+ A ++ S + Q++ V + Sbjct: 366 RLDRLASDCMGRERSAGAADVPDVDELASQIVGTIAE--QRSTWTVWNVHAETERTLRRY 423 Query: 880 --LAFSMVDLLTEAK------SFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLL 931 +L+T A S + E E I+ D + + A G + Sbjct: 424 WFATADERELVTRAVVDRATGSHHSIRITEPEFVREAPELIRASDGVSMFRAHG--SDRY 481 Query: 932 VSRASYEAEKSILRHILE------GKEAVMPLMERVPGELMEKLTSGQRAATRMILETSD 985 + AE ++ ++ + L GQR +S Sbjct: 482 TTSEVMIAEDELIAAARSTDGPRVDPHSLQAGLAIHEARTGLVLDRGQRGLVEAFACSSA 541 Query: 986 RFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM-RSAGVDAQTLA 1044 R V G AG GKTT RA + +++ RV+ L + RA + + A+ L Sbjct: 542 RIVVGIGPAGAGKTTAMRAFAAT----WQADGGRVIPLATSSRAAHVLGAELEMRAENLH 597 Query: 1045 SFLHDTQLQQRSGETPD-------FSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVAS 1097 FL + + + + L+DE+ M G + + + G Sbjct: 598 KFLFEHHRANDRESSDLADRWFQLGAGDVVLVDEAGMAGTLHLHQLLRIATEAGATVRLL 657 Query: 1098 GDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLES 1157 GD QL A+ G L + + A + + R T + R +A++ + Sbjct: 658 GDPAQLAAVDAGGALNLLEEETGAT--YLTTLHRFTDPAEGDATLALRRGNPKAVTFYD- 714 Query: 1158 VKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYT 1217 ++A + AML+ D+ Sbjct: 715 -------------------------DRDRIAAGSRDAMLEA--------------AYDHW 735 Query: 1218 GRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGEL--- 1274 A ++++++ D LN+ R AG++ + V VL+ N+ Sbjct: 736 ACDVRAGKRSVLIAATTGDVNALNARARLERALAGQIEADGV---VLHDGNLAGVGDWVV 792 Query: 1275 -RRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTL 1331 R + + + + + R+ G DG +T++ E + + PR+ VA+ V L Sbjct: 793 TRTNARTLRYGRSRWVHNGDAWRVTG-RHRDGSLTVRHLEHGSSVRLPRDYVADAVEL 849 Score = 64.9 bits (156), Expect = 3e-08, Method: Composition-based stats. Identities = 42/172 (24%), Positives = 65/172 (37%), Gaps = 20/172 (11%) Query: 1341 TGDRMRFTKSD-------RERGYVANSVWTVTAV-SGDSVTLSDGQQTREIRPGQEQAEQ 1392 GD + T+++ R R W VT S+T+ + +R ++ Sbjct: 787 VGDWV-VTRTNARTLRYGRSRWVHNGDAWRVTGRHRDGSLTVRHLEHGSSVRLPRDYVAD 845 Query: 1393 HIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYT-DNRQ 1451 ++L YA TAH AQGA+ A AL TE R E YVA +R + + Y + Sbjct: 846 AVELGYACTAHRAQGATVDTAHALVTTEMTR------EGLYVASTRGRDSNRWYVASDEP 899 Query: 1452 GWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQ 1503 D + T ++V D + S + LR+ LR Sbjct: 900 VTLDCDHEPEPPRTTYEVL----DAVLRRTGAELSATQTLRETTGEATRLRS 947 >UniRef50_D0YT16 DNA primase catalytic core n=1 Tax=Mobiluncus mulieris 28-1 RepID=D0YT16_9ACTO Length = 1125 Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats. Identities = 133/795 (16%), Positives = 258/795 (32%), Gaps = 108/795 (13%) Query: 64 ADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKR---LIDAHNQAVDFAVRQVEAL 120 + + ++ +R G+DLTF+ K +S++ L + + H +A++ + +E Sbjct: 125 QQVEKSKEKQSRAVHGFDLTFAPSKDISVLWALSDEDTRAVMEQCHREAIEQTLAMLEDK 184 Query: 121 ASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ-HNGEWKTLSSDK 179 A G E V TG L+ A F+H +R+ +P LHTH VV N Q +G+W+T+ S Sbjct: 185 ALFTRRGKGGVEQVKTGGLIAAGFDHWDTREGDPHLHTHVVVVNRVQGPDGKWRTIDSR- 243 Query: 180 VGKTGFIENVYANQIAFGRLYREKLKEQV-EALGYETEVVGK----HGMWEMPGVPVE-- 232 + + Y + +++ E LG++ V +W + G+ + Sbjct: 244 -------HGLMPAVVGLSEAYDSAIMDRLTERLGFDWTEVSTTVSGKPVWGINGLNRDLV 296 Query: 233 -AFSGRSQTIREAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAY 291 FS R I G+ A+ + A DTRK K H +W + A+ Sbjct: 297 KEFSTRRGQILRERGDGATREDDKKAWSDTRKDKHHHQLGELTRQWRERALRILGKNPAF 356 Query: 292 RDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPEN 351 ++ G AS D V I L + + + ++ A +L Sbjct: 357 -------TPIQATATGVASIDEIAVM-----VIDNLQKERATWGIWNMQAEAHRLLRKYR 404 Query: 352 GVIERARAGIDEAISREQLIPLDREKG----------------------LFTSGIHVLDE 389 ++ +A +D+ + + + + + G +T+ + E Sbjct: 405 YHYDQRQAVVDQVVDKARELTVQITGGDTRPVTETFQQENTAPAVSAADRYTTRRILDAE 464 Query: 390 LSVR---------ALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQG 440 + AL D Q E + A + ++ I+ G Sbjct: 465 RLLLNGNDSPQGPALQYDQANQALEAWVSEDGFKLDSEQIGAAFEIVTSGRAVDILVGPA 524 Query: 441 GAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFT 500 G AG+ ++ LV + G V A + + + + + + ++ AF Sbjct: 525 G-AGKTTTLSALVAAWKTAGVPVAGFAPSAAAAKVLAEATGQAATIAS---WTVKPQAFQ 580 Query: 501 PGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTG---TGSALMAMKDAGVNT 557 PG VIVD+ + + L ++L+ + G A + T Sbjct: 581 PGQLVIVDEAAMSATLDLAALAQATREAGAKLLLVGDHHQLSAVEAGGAFSMLVRHNTTT 640 Query: 558 YRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSE 617 R G+ P R S+ G +E A++ Sbjct: 641 IR--DGDTGRVITQKTPPTLEGVRRF-----RQPWEAGASLLLREGKKE------AVKDY 687 Query: 618 LKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQ 677 L + G + + A + + + Y G + Sbjct: 688 LLNDRIKGGGDTSQVAQAIL------KAWWADYTAGK---------------TSLMLAHD 726 Query: 678 SHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQV 737 + S+ + +++ +D+S G+ + L V G V Sbjct: 727 NTSVNTLNEGARELMIQAGIVDTSKETTLRGDQAAGAGDTIVTRLNDKTLGVINGQVFTV 786 Query: 738 ASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSA-TVFASVTQMA 796 ++ D + LP + + +E G+ T + + TV VT+ Sbjct: 787 TRINRDGGIDARDQQGFTHRLP---AEYVKKNVELGYAGTVHRAQGRTVDTVHTMVTETM 843 Query: 797 MDNATLNGLARSGRD 811 + R + Sbjct: 844 TRQQLYVAMTRGRAN 858 Score = 143 bits (360), Expect = 6e-32, Method: Composition-based stats. Identities = 105/596 (17%), Positives = 197/596 (33%), Gaps = 89/596 (14%) Query: 816 SSLDETRT---AEKLARHPSFTVVSEQIKTRA----GETSLETAISHQKSALHTPAQQAI 868 + D+ + K H ++ Q + RA G+ T I + + + + A+ Sbjct: 315 TREDDKKAWSDTRKDKHHHQLGELTRQWRERALRILGKNPAFTPIQATATGVASIDEIAV 374 Query: 869 HLALPVVESKKLAFSMVDLLTEAKSFAAE-GTGFTELGGEINAQIKRGDLLYVDVAKGYG 927 + ++ ++ + + ++ EA + + + ++ + + L V + G Sbjct: 375 M-VIDNLQKERATWGIWNMQAEAHRLLRKYRYHYDQRQAVVDQVVDKARELTVQITGGDT 433 Query: 928 TG------------------LLVSRASYEAEKSILRHILEGKE------AVMPLMERVPG 963 +R +AE+ +L + +E Sbjct: 434 RPVTETFQQENTAPAVSAADRYTTRRILDAERLLLNGNDSPQGPALQYDQANQALEAWVS 493 Query: 964 ELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGL 1023 E KL S Q A I+ + ++ G AG GKTT A+++A ++ V G Sbjct: 494 EDGFKLDSEQIGAAFEIVTSGRAVDILVGPAGAGKTTTLSALVAA----WKTAGVPVAGF 549 Query: 1024 GPTHRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARA 1083 P+ A + A A T+AS+ Q Q L ++DE++M D+A Sbjct: 550 APSAAAAKVLAEATGQAATIASWTVKPQAFQ--------PGQLVIVDEAAMSATLDLAAL 601 Query: 1084 YALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSL 1143 G + + GD QL A+ G F + + + Sbjct: 602 AQATREAGAKLLLVGDHHQLSAVEAGGAFSMLVRHNTTTIR------------------- 642 Query: 1144 INRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPD 1203 + D R ++ V R W S+ +EA + G Sbjct: 643 -DGDTGRVITQKTPPTLEGVRRFRQPWEAGASLLLREGKKEAVKDYLLNDRIKGGGDTSQ 701 Query: 1204 VPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPV 1263 V + +A DYT + +L++ H N LN ++ +AG + + Sbjct: 702 VAQAILKAWWADYTA-----GKTSLMLAHDNTSVNTLNEGARELMIQAGIVDTSKETT-- 754 Query: 1264 LNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPRE 1323 + + L +++ + I++D G I +D +G T + P E Sbjct: 755 --LRGDQAAGAGDTIVTRLNDKTLGVINGQVFTVTRINRDGG-IDARDQQGFTHRL-PAE 810 Query: 1324 AVAEGVTLYTPDTIRVGTG---DRM------RFTKSD----RERGYVANSVWTVTA 1366 V + V L T+ G D + T+ RG N+ W VT Sbjct: 811 YVKKNVELGYAGTVHRAQGRTVDTVHTMVTETMTRQQLYVAMTRGRANNTAWCVTQ 866 Score = 75.3 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 32/137 (23%), Positives = 55/137 (40%), Gaps = 8/137 (5%) Query: 1334 PDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQH 1393 G GD + +D+ G + V+TVT ++ D + QQ R E +++ Sbjct: 756 RGDQAAGAGDTIVTRLNDKTLGVINGQVFTVTRINRDGGIDARDQQGFTHRLPAEYVKKN 815 Query: 1394 IDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGW 1453 ++L YA T H AQG + + R+ + YVA++R + + + Sbjct: 816 VELGYAGTVHRAQGRTVDTVHTMVTETMTRQQL------YVAMTRGRANNTAW--CVTQA 867 Query: 1454 TDAINNAVQKGTAHDVF 1470 D N + DVF Sbjct: 868 PDIDGNPTGQLDTLDVF 884 >UniRef50_Q7CW18 Conjugation protein n=8 Tax=Bacteria RepID=Q7CW18_AGRT5 Length = 1266 Score = 245 bits (624), Expect = 2e-62, Method: Composition-based stats. Identities = 136/652 (20%), Positives = 221/652 (33%), Gaps = 129/652 (19%) Query: 828 ARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDL 887 Q L+ + Q +AL + + L ++ +K F D+ Sbjct: 218 EHMGVHASQMRQQGMAVERGRLDDEAARQNAALIRQKPEQV---LTLISHEKSVFDRHDI 274 Query: 888 LTEAKSFAAEGT-GFTELGGEINAQIKRGDLLYVDVAKGYGTG---LLVSRASYEAEKSI 943 + + F + A +L + G G +R + E ++ Sbjct: 275 AKTLHRYINDDAQTFQNAFAAVLASSALVELQAERIDPGTGKVSNARYSTREMIDLELAM 334 Query: 944 LRHI----LEGKEAVMP-----LMERVPGELMEK-------------LTSGQRAATRMIL 981 R V P +ER L L+ QR A + I Sbjct: 335 ARSAVRLHQAQSHGVDPRHVDRAIERQDRSLRRSSGGMLAASDPSAGLSDEQRHAIKHI- 393 Query: 982 ETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA-GVDA 1040 S+R VV G+AG GK+T +A E++ +V G + +A + + G+++ Sbjct: 394 TGSERIAVVVGFAGAGKSTML----TAARKAWEAQGYQVHGAALSGKAAEGLEESSGIES 449 Query: 1041 QTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDT 1100 +TLAS+ + G S+ LF++DE+ MVG+ +AR G + V GD Sbjct: 450 RTLASWSYS----WDQGRNLIGSSDLFVIDEAGMVGSRQLARFIGEAEERGAKIVLVGDH 505 Query: 1101 DQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKP 1160 +QLQAI G PFR + + I RQ + Sbjct: 506 EQLQAIGAGAPFRAIAEQIG--HVELSGIRRQRHD------------------------- 538 Query: 1161 SQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRT 1220 W + SV +H LA + + D M IVRDY Sbjct: 539 ---------WQRQASVAFATHKTAEGLAAYRDHGDIHFAESRDAAMA---QIVRDYIDDN 586 Query: 1221 PEAREQTLI-VTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLST 1279 + + T + + H D R LN+ I + L + + + + D E R Sbjct: 587 EKRPDGTRVAMAHRRADVRALNATIRSELQNRQRLERSLGLSDGPDRGDRGDVEDR---- 642 Query: 1280 WETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRV 1339 G S D +T Q + G Sbjct: 643 -------------------GNSGDVAELTFQTSNGK---------------------RAF 662 Query: 1340 GTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYA 1399 +GDR+ F +++R+ G + TV V + + + + Q ID YA Sbjct: 663 ASGDRIIFLENNRDLGVKNGMLGTVEDVEKGRIVARLDGRGGDSVSIPTDSYQAIDHGYA 722 Query: 1400 ITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQ 1451 T H QGA+ A L + +R L AYVA++R + VQ+Y D ++ Sbjct: 723 TTIHKNQGATVDRAFVLASSTMDRHL------AYVAMTRHRDSVQLYADIKE 768 Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats. Identities = 90/639 (14%), Positives = 189/639 (29%), Gaps = 123/639 (19%) Query: 308 PASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISR 367 A Q+ ++Q Q + +S K F D+ + + + A A + ++ Sbjct: 243 AARQNAALIRQKPEQVLTLISHEKSVFDRHDIAKTLHRYINDDAQTFQNAFAAV---LAS 299 Query: 368 EQLIPLDREK----------GLFTSGIHVLDELSVRALSRDIMKQNRVTVHP-------- 409 L+ L E+ +++ + EL++ + + + V P Sbjct: 300 SALVELQAERIDPGTGKVSNARYSTREMIDLELAMARSAVRLHQAQSHGVDPRHVDRAIE 359 Query: 410 -----------------EKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAEL 452 + S + A+ + +A+V G G AG+ + Sbjct: 360 RQDRSLRRSSGGMLAASDPSAGLSDEQRHAIKHITGS-ERIAVVVGFAG-AGKSTMLTAA 417 Query: 453 VMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGS--TVIVDQG 510 QG +V A ++ +++ + + + GS ++D+ Sbjct: 418 RKAWEAQGYQVHGAALSGKAAEGLEESSGIESRTLASWSYSWDQGRNLIGSSDLFVIDEA 477 Query: 511 EKLSLKETLTLLDGAARHNVQVLITDSG---QRTGTGSALMAMKD-------AGVNTYRW 560 + ++ + A ++++ Q G G+ A+ + +G+ R Sbjct: 478 GMVGSRQLARFIGEAEERGAKIVLVGDHEQLQAIGAGAPFRAIAEQIGHVELSGIRRQRH 537 Query: 561 QGGEQRPATIISE------------------PDRNVRYARLAGDFAASVKAGEESVAQVS 602 Q + R+ A++ D+ + + Sbjct: 538 DWQRQASVAFATHKTAEGLAAYRDHGDIHFAESRDAAMAQIVRDYIDDNEKRPDGTRVAM 597 Query: 603 GVR--EQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWN 660 R + L IRSEL+ + L S D R R G V ++ N Sbjct: 598 AHRRADVRALNATIRSELQNRQRLER--------SLGLSDGPDRGDR-----GDVEDRGN 644 Query: 661 PETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRV 720 LT + + G+ A G+R+ Sbjct: 645 SG--------------DVAELTFQTSNGKRA--------------------FASGDRIIF 670 Query: 721 TGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGH 780 L V G V V + + + GR + +D + +++G+ T Sbjct: 671 LENNRDLGVKNGMLGTVEDVEKGRIVARLDGRGGDSVSIPTD---SYQAIDHGYATTIHK 727 Query: 781 SVSDSATVFASVTQMAMDNAT-LNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQ 839 + + + MD + R V+LY+ + E +A +L H + Sbjct: 728 NQGATVDRAFVLASSTMDRHLAYVAMTRHRDSVQLYADIKEFTSAGRLVDHGVAPYEHNR 787 Query: 840 IKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESK 878 +LE + + +A+ A P + K Sbjct: 788 RARENYFVTLENDKGERHTVWGVDLNRAMRDASPAIGDK 826 >UniRef50_B5YII1 Putative uncharacterized protein n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YII1_THEYD Length = 1843 Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 94/353 (26%), Positives = 160/353 (45%), Gaps = 25/353 (7%) Query: 813 RLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLAL 872 L+ ++++ + L + +VSE+ + E + A++ I+ A+ Sbjct: 171 ELFKQVEDSLKEQGLTQQDIIKLVSEKRENLTQELNQANK--------EELAKEIINKAI 222 Query: 873 PVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKG------Y 926 V + FS DL A +A L + + ++ YV + Y Sbjct: 223 DEVIDRNSTFSQSDLFKAAFQISAGRVDSDTLVQAVKENERLIEMGYVQDKQHNRANATY 282 Query: 927 GTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDR 986 S+ E +IL+ I EGK +V + E+ EKLT Q A IL+++DR Sbjct: 283 QEKYFTSQEVIAWEHNILKSIEEGKGSVEKITEQRYEN--EKLTKSQLEAINHILQSTDR 340 Query: 987 FTVVQGYAGVGKTTQFRAV---MSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVDAQTL 1043 +T V G+AGVGKTT + + +N + + R++G+ T+ AV E++ G++A T Sbjct: 341 YTAVVGWAGVGKTTFVGEMSKELGKINEIAKEAGYRLIGVSNTNTAVNELKEVGIEAMTT 400 Query: 1044 ASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQL 1103 A FL+ + Q S T+ ++DE+S + DM+ G R V GD QL Sbjct: 401 AKFLNSAKALQ-----SLDSKTILIVDEASFLSTKDMSTILDKTRESGCRIVFIGDDRQL 455 Query: 1104 QAIAPGQPFRLQQTRSAADVAIMKEIVRQ-TPELREAVYSLINRDVERALSGL 1155 + G PF + + M +IVRQ EL+ AVY + ++++E AL+ + Sbjct: 456 PGVQAGSPFAALIRENKINHVKMTDIVRQRNEELKSAVYDIYHKNIESALNKI 508 Score = 164 bits (415), Expect = 3e-38, Method: Composition-based stats. Identities = 87/505 (17%), Positives = 183/505 (36%), Gaps = 55/505 (10%) Query: 118 EALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ-HNGEWKTLS 176 E R +G++ + + N + + H R +PQ+H H N T+ NG+WK ++ Sbjct: 8 EGYIQYRETVNGETISKSSDNATVLVNTHLCGR-LDPQIHNHISFFNFTRTENGDWKAIN 66 Query: 177 SDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVG----KHGMWEMPGVPVE 232 SD +Y+N+ F +L Q++ G TE+V K + ++ G+ E Sbjct: 67 SD---------AIYSNKYMFEAYLENQLAYQLKQQGINTELVKEGNSKEYVTKIAGLNEE 117 Query: 233 AFSG--RSQT-IREAVGED-----------ASLKSRDVAALDTRKSKQHVDPEIKMAEWM 278 + G R+ I + + + + R+ A L+ R+SKQ + Sbjct: 118 HWKGIARTSELIDKYLEQHKEELLQKYPNATESQLREYAYLEIRQSKQSKTIGELFKQVE 177 Query: 279 QTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTD 338 +LKE G + ++ + T A+++ ++ + +AI + +R F+ +D Sbjct: 178 DSLKEQGLTQQDIIKLVSEKRENLTQELNQANKEEL-AKEIINKAIDEVIDRNSTFSQSD 236 Query: 339 VLARTVGILPPENGVIERARAGIDE---------AISREQLIPLDREKGLFTSGIHVLDE 389 + I +A + + ++ FTS + E Sbjct: 237 LFKAAFQISAGRVDSDTLVQAVKENERLIEMGYVQDKQHNRANATYQEKYFTSQEVIAWE 296 Query: 390 LSVRALSRDIMKQ-NRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRER 448 ++ + ++T ++ T +A++ + Q V G G Sbjct: 297 HNILKSIEEGKGSVEKITEQRYENEKLTKSQLEAINHILQSTDRYTAVVGWAGVGKTTFV 356 Query: 449 ------VAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPG 502 + ++ +A+E G + ++ + +K+ + + Sbjct: 357 GEMSKELGKINEIAKEAGYRLIGVSNTNTAVNELKEVGIEAMTTAKFLNSAKALQSLDSK 416 Query: 503 STVIVDQGEKLSLKETLTLLDGAARHNVQVL-ITDSGQRTG--TGSALMAMKDAG----- 554 + +IVD+ LS K+ T+LD +++ I D Q G GS A+ Sbjct: 417 TILIVDEASFLSTKDMSTILDKTRESGCRIVFIGDDRQLPGVQAGSPFAALIRENKINHV 476 Query: 555 -VNTYRWQGGEQRPATIISEPDRNV 578 + Q E+ + + +N+ Sbjct: 477 KMTDIVRQRNEELKSAVYDIYHKNI 501 Score = 110 bits (275), Expect = 5e-22, Method: Composition-based stats. Identities = 51/291 (17%), Positives = 117/291 (40%), Gaps = 30/291 (10%) Query: 1192 QKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKA 1251 +K + + I ++Y + + + I N+D ++LNS+I + Sbjct: 653 EKYEEYQKQIEQQQKEILREIAKEYIS---QGYKNSAISVATNQDAKILNSLISEELRNG 709 Query: 1252 GELGKEQVMVPVLNTANIRDGELRRLSTWETH--------RDALVLVDNVYHRIAGISKD 1303 G + + V V N+ + E + S++ + + ++ + I K+ Sbjct: 710 ELKGAKSIEVNVWVNKNLDNVERLKASSYNVGDKLLVMSSGGGVSVGKELFVKEVDIVKN 769 Query: 1304 DGLI--TLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSV 1361 + T + E R+ + E + + V + ++I++ G+++ F + R + + + Sbjct: 770 TLKVEYTTKKGEVKERVFN-IEKLGDKVQAFQNESIQIAEGEKLIFNNTYRNKNFANSEF 828 Query: 1362 WTVTAVS--GDSVTL-----SDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAI 1414 V +++ S+T+ SD +T + H YA+TA QG + I Sbjct: 829 AYVKSINNEDGSITIVSKLDSDKAKTTTFTKEELAQGVHFQHGYAVTADHMQGKTTQNVI 888 Query: 1415 ALEGTEGNRKLMAGFESAYVALSRMKQHVQVY-TDNRQGWTDAINNAVQKG 1464 A E +E+ V+++R KQ+ +Y T +++ + + + K Sbjct: 889 AFE--------TRNYENFLVSITRAKQNATIYSTMSKERFIEKASEEATKE 931 Score = 98.8 bits (244), Expect = 2e-18, Method: Composition-based stats. Identities = 46/324 (14%), Positives = 109/324 (33%), Gaps = 16/324 (4%) Query: 581 ARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLD 640 +A ++ + + S V+ ++ IL I EL+ + G + + LD Sbjct: 671 REIAKEYISQ--GYKNSAISVATNQDAKILNSLISEELRNGELKGAKSIEVNVWVNKNLD 728 Query: 641 SRSRYLRDMYRPGM--VMEQWNPETRSHDRYVIDRVTAQSHSL----TLRDAQGETQVVR 694 + R Y G ++ + V ++L T + + + +V Sbjct: 729 NVERLKASSYNVGDKLLVMSSGGGVSVGKELFVKEVDIVKNTLKVEYTTKKGEVKERVFN 788 Query: 695 ISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASV--SEDAMTVVV--P 750 I L F+ E + +A+GE+L + + V S+ + ++T+V Sbjct: 789 IEKLGDKVQAFQNESIQIAEGEKLIFNNTYRNKNFANSEFAYVKSINNEDGSITIVSKLD 848 Query: 751 GRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGR 810 T + + ++G+ T H + + + L + R+ + Sbjct: 849 SDKAKTTTFTKEELAQGVHFQHGYAVTADHMQGKTTQNVIAFETRNYE-NFLVSITRAKQ 907 Query: 811 DVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHL 870 + +YS++ + R EK + + E++ + E T +Q Sbjct: 908 NATIYSTMSKERFIEKASEEATKE-RIERMAYKFNEEVFNTVKEQIYKNFKQQQEQVKEQ 966 Query: 871 ALPVVESKKLAFSMVDLLTEAKSF 894 ++ F + +++ + Sbjct: 967 GFEN--EREGQFQKQESKEQSERY 988 >UniRef50_B1MAE8 TraA/ATP-dependent exoDNAse/relaxase n=9 Tax=Mycobacterium RepID=B1MAE8_MYCA9 Length = 1110 Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats. Identities = 137/605 (22%), Positives = 234/605 (38%), Gaps = 55/605 (9%) Query: 10 AGSAGNYYTDKDN----YYVLGSMGERWAGRGAEQLGLQGS-VDKDVFTRLLE-GRLPDG 63 G G YY++ + ++ G RG G G D D TR L+ G P G Sbjct: 33 GGGLGEYYSESETRLPVWFSAGRDTTA--ARGLTGAGRAGENADLDAVTRWLDDGESPCG 90 Query: 64 ADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGD---KRLIDAHNQAVDFAVRQVEAL 120 A Q + H GYDLTF APKSVS+M LG D K + DAH A+ A+ + Sbjct: 91 ASGRAFQKRAGVH--GYDLTFCAPKSVSLMRGLGNDVTVKAVADAHAFAITEAMEYLAEH 148 Query: 121 ASTRVMTD---GQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANV-TQHNGEWKTLS 176 + + G+ + V +V A F H+TSR +P LHTH +V N + +G +L Sbjct: 149 GGYTRVHNPRTGEKDLVRLPGIVAAGFQHETSRAGDPHLHTHVLVPNRQARADGRLVSLD 208 Query: 177 SDKVGKTGFIENVYANQIAFGRLYREKLKEQV-EALGYETEVVGKH-GMWEMPGV---PV 231 ++Y A G +Y+ L+ ++ ++G E V H GM ++ G + Sbjct: 209 GT---------SLYHEAKAAGIIYQATLRRELTRSIGVEWNDVDPHTGMADIAGADRGDL 259 Query: 232 EAFSGRSQTIREAVGEDASLKSRD--VAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIR 289 ++S RS +RE ++ + A L T K + + W D R Sbjct: 260 RSWSTRSTQLREWASGHLRVECDELSAAQLAT-AQKATRPRKPEGVAWASLRVAWADDTR 318 Query: 290 AYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPP 349 +R ++ G D + V +A++ RK FT D++ +P Sbjct: 319 TFRVD----ETVQQAARDARRAAGVDYAEVVRRAVSHGL-RKAAFTRADLIEAIGARMPV 373 Query: 350 ENG-------VIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQ 402 ++ VIER G+ I E+ +T+ V +E ++ + + Sbjct: 374 DDADGPSPREVIERLADGVALRIGDERAAHQREGSIRYTAADLVAEERAIIEVM--GRRH 431 Query: 403 NRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGRE 462 + + + + + AV+ +A + +S G AG+ + L A + G+ Sbjct: 432 SAAVLPSVDTAGLSPDQARAVTAIATSERLVQPLSAPAG-AGKTHSLRALRAAAHDAGKR 490 Query: 463 VQIIAADRRSQMN-MKQDERLSGELITGRRQLLEGMA--FTPGSTVIVDQGEKLSLKETL 519 V + A R+ +++ G + LE + V+VD+ + + Sbjct: 491 VLVAAPTGRAVDVAVREQAGDHGATLDALLGRLERGQEVLDADTVVVVDEAGMVGTQHLR 550 Query: 520 TLLDGAARHNVQVLITDSGQRTGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVR 579 LL+ A +V++ + + V W QR + + D + R Sbjct: 551 RLLERATAAGTKVVLVGDEHQLAPVAQRGGTFAQLVTDLPW---AQRLSQVWRMHDHDER 607 Query: 580 YARLA 584 A LA Sbjct: 608 NASLA 612 Score = 140 bits (352), Expect = 6e-31, Method: Composition-based stats. Identities = 102/596 (17%), Positives = 184/596 (30%), Gaps = 82/596 (13%) Query: 820 ETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKK 879 R E +A ++ +T + +++ A + A + + A+ +K Sbjct: 297 RPRKPEGVAWASLRVAWADDTRTFRVDETVQQAARDARRAAGVDYAEVVRRAVSH-GLRK 355 Query: 880 LAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTG----LLVSRA 935 AF+ DL+ + E+ ++ G L + + + Sbjct: 356 AAFTRADLIEAIGARMPVDDADGPSPREVIERLADGVALRIGDERAAHQREGSIRYTAAD 415 Query: 936 SYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAG 995 E++I+ + G+ ++ V L+ Q A I + + AG Sbjct: 416 LVAEERAIIEVM--GRRHSAAVLPSVD---TAGLSPDQARAVTAIATSERLVQPLSAPAG 470 Query: 996 VGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM--RSAGVDAQTLASFLHDTQLQ 1053 GKT RA+ +A + RV+ PT RAV AG TL + L + Sbjct: 471 AGKTHSLRALRAAAH----DAGKRVLVAAPTGRAVDVAVREQAGDHGATLDALLGRLE-- 524 Query: 1054 QRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFR 1113 G+ ++T+ ++DE+ MVG + R A G + V GD QL +A Sbjct: 525 --RGQEVLDADTVVVVDEAGMVGTQHLRRLLERATAAGTKVVLVGDEHQLAPVAQRGGTF 582 Query: 1114 LQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPE 1173 Q + ++ R + AL R+ W Sbjct: 583 AQLVTDLPWAQRLSQVWRMHDHDERNASLAVRDGGPAAL------------RRAVGWYRR 630 Query: 1174 HSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHL 1233 H +T+ + V +T R+ LI Sbjct: 631 HDRLHIGDQ-----------------------VTMADDAVAAWTADVAAGRDGLLI-ADR 666 Query: 1234 NEDRRVLNSMIHDVREKA----------GELGKEQVMVPVLNTANIRDGELRRLSTWETH 1283 E LN IH R + V++ NT +I R Sbjct: 667 WEMADALNIRIHSERISDDAPTVAAARGHRVAAGDVVITRQNTTDIPTRTDR-------G 719 Query: 1284 RDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGD 1343 DA + + + + D G I + + + + + + L T+ G Sbjct: 720 ADADPIRNGQRWEVLAVDPDAGRIAARRLDDRAVAVLSGDYLRQYTHLGYAVTVHAAQGV 779 Query: 1344 RMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYA 1399 +D ++ T S V L+ G+ T +R +A + D +A Sbjct: 780 T-----ADTCHTLLSAEAAT---RSIAYVGLTRGRHTNTVRLYDTRAGE-ADHEHA 826 >UniRef50_Q84GD9 TraA n=5 Tax=Corynebacterium glutamicum RepID=Q84GD9_CORGL Length = 1164 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 180/1076 (16%), Positives = 349/1076 (32%), Gaps = 145/1076 (13%) Query: 1 MMSIAQVRSAGSAGNYY-----------TDKDNYYVLG--SMGERWAGR--------GAE 39 M++IA++ G + YY + D+YY W A Sbjct: 1 MLTIAKMH--GESVAYYESTVTTSDDKISSPDDYYSEDGTQPATAWIQARTEAQATTVAT 58 Query: 40 QLGLQG--SVDKDVFTRLLE-GRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAML 96 LG++ V+ + P G L R S PG+DLTF APKSVS++ L Sbjct: 59 ALGVKNGAQVNGADVGQWFNQAIAPSGHKLGRAPKSSG--VPGFDLTFCAPKSVSLIWGL 116 Query: 97 GGDKRLID----AHNQAVDFAVRQVEALASTRVMTDGQSETV----LTGNLVMALFNHDT 148 D + AH++AV A+ + A D ++ L + H T Sbjct: 117 TDDTDVRSTVDRAHHRAVTTALSYLSEHAGYTRRADDHDRSMMIIDRVEALSGVRYEHRT 176 Query: 149 SRDQEPQLHTHAVVANV-TQHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQ 207 SR +P LH H ++AN +G+W+TL ++Y A G +Y+ L+E+ Sbjct: 177 SRAGDPHLHAHVLLANKQLCRDGKWRTLDG---------VSLYHEARAAGTIYQAVLREE 227 Query: 208 V-EALGYETEVVGKHGMWEMPGVP----VEAFSGRSQTIREAVGEDASLKSRDVAALDTR 262 + LG HG E+ G+ +E FS R++ I + ++ + + Sbjct: 228 LSRTLGVAW-ADTVHGCAEIIGLDDRGLIEDFSTRAREIDQWAADNGVGSDAAFERMGQK 286 Query: 263 KSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQ 322 K++Q D ++ ++E Q K A R + L+P S + V + Sbjct: 287 KTRQVKDLDMPLSELEQNWK-------ARVAETSARKFVEALSPHSHSPQSVALP-TVDE 338 Query: 323 AIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAI---------------SR 367 + ++ + FT DV+ +LP E ++ Sbjct: 339 VLDAVTCERSTFTRADVVEAATELLPVGAVTAEEIYDTVERLADQVCGGQVAWTVTPEKD 398 Query: 368 EQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVP--RTAGYSDAVSV 425 Q+ RE + V++E++ + V V +A ++A+ Sbjct: 399 RQVDRSAREGSQRFTSEAVVEEVNRGIDLATTVTGRGVDASMIAPVEGQLSADQAEAMRA 458 Query: 426 LAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMN-MKQDERLSG 484 + R ++V G AG+ + + G++V +A ++ + +D S Sbjct: 459 VVSSRYLASVVIAPAG-AGKTSSLKAARAAWEQAGKQVVGLAPTGKAADVMVGEDVAHSS 517 Query: 485 ELITGRRQLLEGMAFTP---------GSTVIVDQGEKLSLKETLTLLDGAARHNVQVLIT 535 + + +E ++VD+ +S E + +L+ A + +V++ Sbjct: 518 STLARVLRRVEDQDVEQAVATLGWSTDHVIVVDEAGMVSTPEMVRVLELAHAADARVVLV 577 Query: 536 DSGQRTGT----GSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVR------YARLAG 585 + G G L + + + ++ + +R R A Sbjct: 578 GDPYQYGAVKARGGLLATLAHEVPDAVELREVFRQHDEKERAASKRLRTGVLPDVERAAD 637 Query: 586 DFAAS----------------------VKAGEESVAQVSGVREQAILTQAIRSELKTQGV 623 +A + V AG++S+ S L +A + + GV Sbjct: 638 FYAGAGRLHAGSVTAMLDDALAGWRGDVAAGKDSLLVASTHDYVDALNRAAQQSMIAAGV 697 Query: 624 LGLP---EVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHS 680 + E+++ + V +R + Y + R+ R+ ++ + Sbjct: 698 VDGAEAIELSLGQYAHVGDTILTRR--NDYE---LTTSSGDVVRNGQRWQVEAIEGDGFV 752 Query: 681 LTLR-DAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVAS 739 L R D T + + L L A G + RV G V Sbjct: 753 LARRLDDTAATVRLHPAYLAEHVQLGYASTGHAAQG------ATVDVARVVAG----VGQ 802 Query: 740 VSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSAT--VFASVTQMAM 797 + + V + E L +++S + +G V S + + Sbjct: 803 IDRAGVYVPLTRGREANYLYMAESMPGDSETGHGVVTATQRRESAQYARDLLVQAATRSH 862 Query: 798 DNATLNGLARSGRDVRLYSSLDE--TRTAEKLARHPSFTVVSEQIKTRAGETSLETAISH 855 + + + + R R S + V ++ R A ++ Sbjct: 863 SDQSPHEVHRQARLDWGLSRMSRNVPTGESPFRGTRMAQVADQRAAQRLERVQEFYATTN 922 Query: 856 QKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRG 915 + + A++A + + + + S EL ++ QI Sbjct: 923 ATARVKQAAKEAAQQ--RQSRKRTDTLTSTSGVDQPFSADYLSMSPEELSETMHKQIHES 980 Query: 916 DLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTS 971 + L +E E S LR + E +R + ++ Sbjct: 981 AQRKKTPHEEERERLTAKIEHFEQEVSDLRVQVSELERARRDADRELSQANVRMND 1036 Score = 192 bits (487), Expect = 1e-46, Method: Composition-based stats. Identities = 135/764 (17%), Positives = 234/764 (30%), Gaps = 168/764 (21%) Query: 798 DNATLNGLARSGRDVRLYSSLD---ETRTAEKLARHPSFTVVS---------EQIKTRAG 845 D + + R++ +++ + E++ + + V + K R Sbjct: 251 DRGLIEDFSTRAREIDQWAADNGVGSDAAFERMGQKKTRQVKDLDMPLSELEQNWKARVA 310 Query: 846 ETSLETAISHQKSALHTPAQQA---IHLALPVVESKKLAFSMVDLLTEAKSF----AAEG 898 ETS + H+P A + L V ++ F+ D++ A A Sbjct: 311 ETSARKFVEALSPHSHSPQSVALPTVDEVLDAVTCERSTFTRADVVEAATELLPVGAVTA 370 Query: 899 TGFTELGGEINAQIKRGDLL---------YVDVAKGYGTGLLVSRASYEA-EKSI-LRHI 947 + + Q+ G + VD + G+ S A E + I L Sbjct: 371 EEIYDTVERLADQVCGGQVAWTVTPEKDRQVDRSAREGSQRFTSEAVVEEVNRGIDLATT 430 Query: 948 LEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMS 1007 + G+ ++ V G+ L++ Q A R ++ + +VV AG GKT+ +A + Sbjct: 431 VTGRGVDASMIAPVEGQ----LSADQAEAMRAVVSSRYLASVVIAPAGAGKTSSLKAARA 486 Query: 1008 AVNMLPESERPRVVGLGPTHRAVGEM--RSAGVDAQTLASFLH---DTQLQQRSGETPDF 1062 A E +VVGL PT +A M + TLA L D ++Q Sbjct: 487 A----WEQAGKQVVGLAPTGKAADVMVGEDVAHSSSTLARVLRRVEDQDVEQAVATLGWS 542 Query: 1063 SNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAAD 1122 ++ + ++DE+ MV +M R L A R V GD Q A+ D Sbjct: 543 TDHVIVVDEAGMVSTPEMVRVLELAHAADARVVLVGDPYQYGAVKARGGLLATLAHEVPD 602 Query: 1123 VAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHS 1182 ++E+ RQ E A R P+ ++ Sbjct: 603 AVELREVFRQHDEKERAASK----------------------RLRTGVLPDVERAADFYA 640 Query: 1183 QEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNS 1242 +L AML + + + G ++ L+V ++ LN Sbjct: 641 GAGRLHAGSVTAML-------------DDALAGWRGDVAAGKDS-LLVASTHDYVDALNR 686 Query: 1243 MIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISK 1302 AG + + + L + D ++ N Y Sbjct: 687 AAQQSMIAAGVVDGAEAIELSL-------------GQYAHVGDTILTRRNDY-------- 725 Query: 1303 DDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVW 1362 + +GD +R W Sbjct: 726 ---------------------------------ELTTSSGDVVR-----------NGQRW 741 Query: 1363 TVTAVSGDSVTLSD--GQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTE 1420 V A+ GD L+ +R +H+ L YA T H AQGA+ A + G Sbjct: 742 QVEAIEGDGFVLARRLDDTAATVRLHPAYLAEHVQLGYASTGHAAQGATVDVARVVAGV- 800 Query: 1421 GNRKLMAGFESAYVALSRMKQHVQVY--------TDNRQGWTDAINNAVQKGTAHDVF-- 1470 YV L+R ++ +Y ++ G A A D+ Sbjct: 801 ----GQIDRAGVYVPLTRGREANYLYMAESMPGDSETGHGVVTATQRRESAQYARDLLVQ 856 Query: 1471 -------EPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLA 1507 + P A + +R R+V G + R +A Sbjct: 857 AATRSHSDQSPHEVHRQARLDWGLSRMSRNVPTGESPFRGTRMA 900 >UniRef50_A8GX52 Conjugal transfer protein TraA n=53 Tax=cellular organisms RepID=A8GX52_RICB8 Length = 1383 Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats. Identities = 113/653 (17%), Positives = 211/653 (32%), Gaps = 144/653 (22%) Query: 827 LARHPSFTVVSEQIKTRAGETSLETAISHQK--SALHTPAQQAIHLALPVVESKKLAFSM 884 + P + + + + + K H + L + + F+ Sbjct: 201 IQVDPISFMPQQHVGPTRMRSIINEIAEQNKICKLAHLEIIKNSDGVLNRIIRHQAIFTK 260 Query: 885 VDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSIL 944 +D+ A E E I + L+ + G T ++ + E +L Sbjct: 261 LDIEK-AIKEIPEEV---EKSKLIREVLNSDRLVKLYNEDGTDTKYYTTKDIRDEELRLL 316 Query: 945 RHILEGKEAVMPLMERVPGELMEKL---TSGQRAATRMILETSDRFTVVQGYAGVGKTTQ 1001 R + + ++ L QR + + IL + ++QG AG GK+ Sbjct: 317 RIAYKVNNQIHFNNIIKLKSAIDNLASVNEAQRESLQHILINNQGIRILQGRAGTGKS-- 374 Query: 1002 FRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAG-VDAQTLASFLHDTQLQQRSGETP 1060 V+ + + ++GL PTH+A E++S G T+ FL + +G+ Sbjct: 375 --QVLVQAYKIATNHGQNIIGLSPTHKAASELKSKGYRQCYTVKGFL----FKLYNGKAD 428 Query: 1061 DFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSA 1120 N+L ++DE+ MVGN+D + + + +GD QL ++ G F + ++ Sbjct: 429 LPRNSLLVVDEAGMVGNSDYLELLKVARSNNCNLILAGDERQLTSVERGGMFAVLASKFG 488 Query: 1121 ADVAIMKEIVRQTPEL-REAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEF 1179 + + I RQ+ RE D+ L L Q +H++ E Sbjct: 489 S--YELSRIRRQSKAWAREMASCFARSDITGGLRLL---------AQHDGLKIDHTLEES 537 Query: 1180 SHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRV 1239 ++ D+ + A + LI+T N + Sbjct: 538 -----------------------------MARLINDW-SNSKFALNERLIITMRNAEVDS 567 Query: 1240 LNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAG 1299 +N I ++ + G L E RR + E H D + Sbjct: 568 INQGIRELLKARGLL---------------TGKEYRRYLSSEKHEDYM------------ 600 Query: 1300 ISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVAN 1359 GDR+ F ++++ Sbjct: 601 -----------------------------------------AGDRILFKSTNKDLQIENG 619 Query: 1360 SVWTVTAVSGDS-VTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEG 1418 T+T+VS D + +D + E P YA T + AQGAS L Sbjct: 620 EFATITSVSNDKFIAKTDSGKEIEFNPQDVS----FKHGYASTVYKAQGASIKNVYVLHN 675 Query: 1419 TEGNRKLMAGFESAYVALSRMKQHVQVY-----TDNRQGWTDAINNAVQKGTA 1466 G ++YVA++R + V++Y T N ++ + ++ Sbjct: 676 LAG------NSRNSYVAMTRHIEEVKLYYNRKATRNMASLISQLSKIDNRLSS 722 Score = 102 bits (253), Expect = 2e-19, Method: Composition-based stats. Identities = 77/563 (13%), Positives = 185/563 (32%), Gaps = 85/563 (15%) Query: 321 TQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKG-- 378 + + + FT D+ + + +P E I E ++ ++L+ L E G Sbjct: 245 DGVLNRIIRHQAIFTKLDI-EKAIKEIPEEV----EKSKLIREVLNSDRLVKLYNEDGTD 299 Query: 379 --LFTSGIHVLDELSVRALSRDIMKQN------RVTVHPEKSVPRTAGYSDAVSVLAQDR 430 +T+ +EL + ++ + Q ++ + +++ + + Sbjct: 300 TKYYTTKDIRDEELRLLRIAYKVNNQIHFNNIIKLKSAIDNLASVNEAQRESLQHILINN 359 Query: 431 PSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGR 490 + I+ G+ G G+ + + + +A G+ + ++ ++ +K + G Sbjct: 360 QGIRILQGRAG-TGKSQVLVQAYKIATNHGQNIIGLSPTHKAASELKSKGYRQCYTVKGF 418 Query: 491 --RQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLI-TDSGQRTGT--GS 545 + S ++VD+ + + L LL A +N +++ D Q T G Sbjct: 419 LFKLYNGKADLPRNSLLVVDEAGMVGNSDYLELLKVARSNNCNLILAGDERQLTSVERGG 478 Query: 546 ALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVR 605 + +Y ++ E +A FA Sbjct: 479 MFAVLASK-FGSYELSRIRRQSKAWARE---------MASCFA----------------- 511 Query: 606 EQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRS 665 ++ +T +R + G+ + T+ ++ S N + Sbjct: 512 -RSDITGGLRLLAQHDGL--KIDHTLEESMARLINDWS----------------NSKFAL 552 Query: 666 HDRYVIDRVTAQSHSLTLRDAQGETQVVRISSL--DSSWSLFRPEKM--PVADGERLRVT 721 ++R +I A+ S+ QG ++++ L + + + G+R+ Sbjct: 553 NERLIITMRNAEVDSI----NQGIRELLKARGLLTGKEYRRYLSSEKHEDYMAGDRILFK 608 Query: 722 GKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHS 781 L++ G+ + SVS D E + +P + ++G+ T + Sbjct: 609 STNKDLQIENGEFATITSVSNDKFIAKTDSGKE-----IEFNPQD-VSFKHGYASTVYKA 662 Query: 782 VSDSAT-VFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQI 840 S V+ + + R +V+LY + + +A S + Sbjct: 663 QGASIKNVYVLHNLAGNSRNSYVAMTRHIEEVKLYYN---RKATRNMASLISQLSKIDNR 719 Query: 841 KTRAGETSLETAISHQKSALHTP 863 + +LE ++ Q +P Sbjct: 720 LSSINFKTLEELVAIQDQENKSP 742 >UniRef50_A1SH09 DNA primase catalytic core, N-terminal domain n=1 Tax=Nocardioides sp. JS614 RepID=A1SH09_NOCSJ Length = 1797 Score = 236 bits (602), Expect = 6e-60, Method: Composition-based stats. Identities = 157/944 (16%), Positives = 278/944 (29%), Gaps = 167/944 (17%) Query: 57 EGRLPDGAD-----LSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDK---RLIDAHNQ 108 GR P A +++ G+DLTFS KSVS + L + + AH+ Sbjct: 183 HGREPQDARELSGFIAKASRQPTSAVAGFDLTFSPVKSVSALWALAPKEVAADIRAAHDA 242 Query: 109 AVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ- 167 AV + +E + + G V LV A F H SR +P LHTH V+N Q Sbjct: 243 AVVDTLTWLEREVAHTRVGSGGVRQVKVRGLVAAAFTHRDSRAGDPDLHTHVAVSNKVQA 302 Query: 168 HNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKL-KEQVEALGYET-----EVVGKH 221 +G W L +YA ++ Y ++ E V LG E V GK Sbjct: 303 EDGHWLALDG---------RLLYAAKVTASEHYNTRVEAELVARLGVEFADRDDTVGGKV 353 Query: 222 GMWEMPGVPVEA---FSGRSQTIREAVGE-DASLKSR--------------DVAALDTRK 263 + E+ GV +S R I E A + R D A L+TR Sbjct: 354 PVREIRGVSTTLTRWWSRRRVAIEARQAEIAAEFQGRFGRPPTAIEAKSLADQATLETRD 413 Query: 264 SKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQA 323 +K E E + D+ D+ D + V A Sbjct: 414 AKHGRRSER---EQRDEWRAEADDVLGDPAEVDEMYSRAVGRRNGGRTATRDWVEDVAAA 470 Query: 324 -IAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDE----AISREQLIPLDR--- 375 IA + E + + +LA + +D+ AISR + +D Sbjct: 471 TIAFVEESRATWNVWHLLAEAQRQARRAGIARDDVDRAVDQVVDAAISRSVRLGVDDPIS 530 Query: 376 -----------------EKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAG 418 L+TS +L E + L+ V E ++ A Sbjct: 531 EPPPLQRPDGASVYDVHGATLYTSAKVLLAEEEILNLAGRTGGHALADVRVEVAIAGAAA 590 Query: 419 Y-------SDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRR 471 A++ ++ ++ G+ ++ L G +V +A + Sbjct: 591 NGFELNDAQAAMARDLATSGAVVQLALAPAGTGKTTTMSVLADAWAAGGGQVIGLAPSAQ 650 Query: 472 SQMNMKQDERLSGELITGRRQLLEGMAFT----------PGSTVIVDQGEKLSLKETLTL 521 + + Q + + L P S VIVD+ + + E Sbjct: 651 AAHELGQAVSGYTDTLAKLTWTLANEPSVAWPRWIRDIGPQSLVIVDEAGQAATTELAAA 710 Query: 522 LDGAARHNVQVLITDSGQRTGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYA 581 + A V + Q+ A ++D + Q G + + D A Sbjct: 711 VRFVAERGGAVRLIGDDQQLAAVGAGGVLRD-----IQQQYGASTLSEVRRFDDPAEAAA 765 Query: 582 RLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDS 641 LA V+ G+ + + + L + Sbjct: 766 TLA------VREGDAAALGFYADNARIHVG--------------------------DLSA 793 Query: 642 RSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSS 701 + D + + + R ++ ++ A++ + L V ++ + Sbjct: 794 VADQAYDSWAS-DRAAGLDSVLLAPTRELVCQLNARARADRLTATATVGPEVDLADGNRG 852 Query: 702 WSLFRPEKMPVADGERLRVTGKIPGL------RVSGGDRLQVASV-SEDAMTVVVPGRAE 754 + G+ + L V GDR ++ V + + Sbjct: 853 -----------SVGDVIVTRRNSRRLVVSRSNWVKNGDRWRIEKVLGDGGLLARHLELGR 901 Query: 755 PATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRL 814 LP+ D + L ++ + + G++R + + Sbjct: 902 TVELPL-DYVAQHVHLGYATTVHGAQGMTADTAHLVAAGEETRQ-TLYVGISRGRQANHI 959 Query: 815 YSS-----LDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIH 869 Y + K R P+ + +I R G T + SA T A+ Sbjct: 960 YLDTGYDGDPHSLIDPKALRPPTAIDILAEILERDGSDRSATTTQREASAYTTQFHDAVM 1019 Query: 870 LALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIK 913 +A +AAE + N +++ Sbjct: 1020 R-----------------YHDALGYAAEDVLGADSLASTNREVE 1046 Score = 123 bits (307), Expect = 8e-26, Method: Composition-based stats. Identities = 101/592 (17%), Positives = 179/592 (30%), Gaps = 65/592 (10%) Query: 784 DSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTR 843 V Q + R + S D+ + A+H + ++ + R Sbjct: 370 SRRRVAIEARQAEIAAEFQGRFGRPPTAIEAKSLADQATLETRDAKHGRRSEREQRDEWR 429 Query: 844 AGETSL-----------ETAISHQKSA--LHTPAQQAIHLA-LPVVESKKLAFSMVDLLT 889 A + A+ + + + A + VE + +++ LL Sbjct: 430 AEADDVLGDPAEVDEMYSRAVGRRNGGRTATRDWVEDVAAATIAFVEESRATWNVWHLLA 489 Query: 890 EAKSFAAEGTGFTE-----LGGEINAQIKRGDLLYVDVAKG----------------YGT 928 EA+ A + + ++A I R L VD +G Sbjct: 490 EAQRQARRAGIARDDVDRAVDQVVDAAISRSVRLGVDDPISEPPPLQRPDGASVYDVHGA 549 Query: 929 GLLVSRASYEAEKSILRHI-LEGKEAVMPLMERVP----GELMEKLTSGQRAATRMILET 983 L S AE+ IL G A+ + V +L Q A R + + Sbjct: 550 TLYTSAKVLLAEEEILNLAGRTGGHALADVRVEVAIAGAAANGFELNDAQAAMARDLATS 609 Query: 984 SDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA-GVDAQT 1042 + AG GKTT + A + +V+GL P+ +A E+ A T Sbjct: 610 GAVVQLALAPAGTGKTTTMSVLADA----WAAGGGQVIGLAPSAQAAHELGQAVSGYTDT 665 Query: 1043 LASFL----HDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASG 1098 LA ++ + +L ++DE+ T++A A +A GG G Sbjct: 666 LAKLTWTLANEPSVAWPRWIRDIGPQSLVIVDEAGQAATTELAAAVRFVAERGGAVRLIG 725 Query: 1099 DTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESV 1158 D QL A+ G R Q + A + E+ R A + AL Sbjct: 726 DDQQLAAVGAGGVLRDIQQQYGAST--LSEVRRFDDPAEAAATLAVREGDAAALGFYADN 783 Query: 1159 KPSQVPRQE--GAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDY 1216 V A + ++ + ++ L ++ + + A A V Sbjct: 784 ARIHVGDLSAVADQAYDSWASDRAAGLDSVLLAPTRELVCQLNARARADRLTATATVGPE 843 Query: 1217 TGRTPEAREQT--LIVTHLNEDRRVLNS----------MIHDVREKAGELGKEQVMVPVL 1264 R +IVT N R V++ I V G L + + + Sbjct: 844 VDLADGNRGSVGDVIVTRRNSRRLVVSRSNWVKNGDRWRIEKVLGDGGLLARHLELGRTV 903 Query: 1265 NTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNT 1316 + L T A + + H +A + + + + G Sbjct: 904 ELPLDYVAQHVHLGYATTVHGAQGMTADTAHLVAAGEETRQTLYVGISRGRQ 955 Score = 69.1 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 58/150 (38%), Gaps = 20/150 (13%) Query: 1340 GTGDRMRFTKSDRE------RGYVANSVWTVTAVSGDSVTLSDGQQT-REIRPGQEQAEQ 1392 GD + ++ R W + V GD L+ + R + + Q Sbjct: 853 SVGDVIVTRRNSRRLVVSRSNWVKNGDRWRIEKVLGDGGLLARHLELGRTVELPLDYVAQ 912 Query: 1393 HIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTD---- 1448 H+ L YA T HGAQG + A + E R+ + YV +SR +Q +Y D Sbjct: 913 HVHLGYATTVHGAQGMTADTAHLVAAGEETRQTL------YVGISRGRQANHIYLDTGYD 966 Query: 1449 -NRQGWTDAINNAVQKGTAHDVFEPKPDRE 1477 + D A++ TA D+ +R+ Sbjct: 967 GDPHSLID--PKALRPPTAIDILAEILERD 994 >UniRef50_B9QRK8 Ti-type conjugative transfer relaxase TraA, putative n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QRK8_9RHOB Length = 1091 Score = 236 bits (601), Expect = 7e-60, Method: Composition-based stats. Identities = 175/970 (18%), Positives = 324/970 (33%), Gaps = 188/970 (19%) Query: 804 GLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSE------QIKTRAGETSLETAISHQK 857 L +G D R+ + A+ + P+ + + Q K + E LE ++ H + Sbjct: 177 SLELAGHDARI---DHRSYEAQGIELLPTSKIGVQARNISSQAKVQGREPGLERSVWHAE 233 Query: 858 SALHTPAQQAIH--LALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEI----NAQ 911 S L + + + + +K F D+ + + F +L + + Sbjct: 234 SRLENVRRITRRPEIVIDAITREKSVFDERDIAKYLHRYVDDEAKFQDLLARVLNSPDVV 293 Query: 912 IKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILE----GKEAVMPLMERVPGELME 967 I + + + + SR E + R V + ++ Sbjct: 294 ILAVEAVDPETDEMEPAK-FTSREMMRLEAEMARRADHLVSVSSHGVDARLRDRMLSSVQ 352 Query: 968 KLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTH 1027 KL+ QR A I +R V G AG GKTT + A + E+ +VVG Sbjct: 353 KLSDEQRVAIERI-TGEERMASVVGRAGAGKTTMMK----AAREVWEANGYQVVGAALAG 407 Query: 1028 RAVGEMR-SAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYAL 1086 +A + AG+ ++TLAS+ QL GE ++F++DE+ MV + M+ Sbjct: 408 KAAEGLEKEAGIASRTLASW----QLSWGRGEGLPDKKSVFVIDEAGMVDSRQMSVFVET 463 Query: 1087 IAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPE-LREAVYSLIN 1145 IA G + V GD +QLQ I G FR R+ A + I RQ + +R+A L Sbjct: 464 IAKAGAKLVLVGDAEQLQPIEAGAAFRSLTDRTG--YAELGTIYRQREQWMRDASMDLAR 521 Query: 1146 RDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVP 1205 DV A+ +S + Sbjct: 522 GDVVTAIRAYQSNGHVINMPLKD------------------------------------- 544 Query: 1206 MTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLN 1265 ++ ++ D+ R + + L++ HL ED LN M V + G + + Sbjct: 545 -QVFGKLIDDW-SRDYDPSKSMLMLAHLREDVYRLNRMARLVLIERGVIETGEKF----- 597 Query: 1266 TANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAV 1325 + R + D ++ L+ N R ++ + + Sbjct: 598 ---RTEEGYRFFA-----------------------VGDQIVFLK----NDRDMNVKNGM 627 Query: 1326 AEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRP 1385 V I GD SD+ R N Sbjct: 628 LGRVIEAGEGRILAEIGDI----GSDQIRRVEVNQ------------------------- 658 Query: 1386 GQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQV 1445 + +++D YA T H +QGA+ L +R L YVA++R ++ V++ Sbjct: 659 ---KTYRNVDHGYATTIHKSQGATVDKVKVLATLSLDRHLT------YVAMTRHREDVKL 709 Query: 1446 YTDNR-----QGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAV 1500 Y G T+ ++ K T D + + ++ ++ +R L + RA+ Sbjct: 710 YHGALSFAKNGGLTEVLSRKGAKDTTLDYAGSELYAQALS----YANSRGLYGLRVARAM 765 Query: 1501 LRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGE 1560 ++ + A+ G + ++L G+ GI L L GL + Sbjct: 766 VQNQRRWFAEQKAKLSELGERL----LSL------GEKLGIGLTGL----ERGLAEETNT 811 Query: 1561 GRVKGSGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPGAIT 1620 + + Q G + A ++ D V ++ Sbjct: 812 VQRQSREHP--ATSQPWIAGVKMWAMSIPDAVETR---------LQSDATLTTHWAEVQN 860 Query: 1621 GGRVWGDIPDNSVQPGAGNGEPVTAEVLAQRQAEEAIRRETERRADEIVRKMAENKPDLP 1680 R+ + P+ +V+ + + + AQ A + + + ++ K + Sbjct: 861 RARLVYERPEQAVK-AMRIKDILKLDGEAQTTARDRLTEDLANTPEQF--GALRGKTGML 917 Query: 1681 DGKT-----EQAVREIAGQERDRAAITEREAALPEGVLREPQRVREAVR-EIARENLLQE 1734 G+T EQA+ + D A + + E +R R+ R +I + + E Sbjct: 918 AGRTAREDREQALNNVPQLSDDVKTYIRLRAEIGDLRTVELERERDLSRIDIPALSPVAE 977 Query: 1735 RLQQMERDMV 1744 + RD + Sbjct: 978 TVLSRIRDAI 987 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 94/721 (13%), Positives = 215/721 (29%), Gaps = 104/721 (14%) Query: 240 TIREAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRA 299 R G+ +LK H + +++A + ++ + + Sbjct: 152 QYRAWAGDKETLKQWRELWSI------HANKSLELAGHDARIDHRSYEAQGIELLPTSKI 205 Query: 300 DLRTLTPGPASQ---DGPDVQQAVTQA-----------------IAGLSERKVQFTYTDV 339 ++ ++ P ++++V A I ++ K F D+ Sbjct: 206 GVQARNISSQAKVQGREPGLERSVWHAESRLENVRRITRRPEIVIDAITREKSVFDERDI 265 Query: 340 ---LARTVGILPPENGVIERARAGIDEAISREQLIP---LDREKGLFTSGIHVLDELSVR 393 L R V ++ R D I + + + E FTS + E + Sbjct: 266 AKYLHRYVDDEAKFQDLLARVLNSPDVVILAVEAVDPETDEMEPAKFTSREMMRLEAEMA 325 Query: 394 ALS------RDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRE 447 + R+ SV + + +A V G+ G AG+ Sbjct: 326 RRADHLVSVSSHGVDARLRDRMLSSVQKLSDEQRVAIERITGEERMASVVGRAG-AGKTT 384 Query: 448 RVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPG--STV 505 + + G +V A ++ ++++ ++ + + P S Sbjct: 385 MMKAAREVWEANGYQVVGAALAGKAAEGLEKEAGIASRTLASWQLSWGRGEGLPDKKSVF 444 Query: 506 IVDQGEKLSLKETLTLLDGAARHNVQVLITDSG---QRTGTGSALMAMKDAGVNTYRWQG 562 ++D+ + ++ ++ A+ ++++ Q G+A ++ D + Sbjct: 445 VIDEAGMVDSRQMSVFVETIAKAGAKLVLVGDAEQLQPIEAGAAFRSLTD--------RT 496 Query: 563 GEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQG 622 G TI + ++ +R D + + G+ A + ++ ++ + G Sbjct: 497 GYAELGTIYRQREQWMR------DASMDLARGDVVTAIRAYQSNGHVINMPLKD--QVFG 548 Query: 623 VLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLT 682 L Y P M D Y ++R+ L Sbjct: 549 KLIDD------------------WSRDYDPSKSMLMLAHLR--EDVYRLNRMAR----LV 584 Query: 683 LRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSE 742 L +G + + + F A G+++ + V G +V E Sbjct: 585 LI-ERGVIETGEKFRTEEGYRFF-------AVGDQIVFLKNDRDMNVKNGMLGRVIEAGE 636 Query: 743 DAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNA-T 801 + + V + T +++G+ T S + + +++D T Sbjct: 637 GRILAEIGDIGSDQIRRVEVNQKTYRNVDHGYATTIHKSQGATVDKVKVLATLSLDRHLT 696 Query: 802 LNGLARSGRDVRLY--------SSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAI 853 + R DV+LY + + K A+ + ++ +A + + Sbjct: 697 YVAMTRHREDVKLYHGALSFAKNGGLTEVLSRKGAKDTTLDYAGSELYAQALSYANSRGL 756 Query: 854 SHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIK 913 + A Q A + +L LL+ + TG E ++ Sbjct: 757 YGLRVARAMVQNQRRWFAEQKAKLSELG---ERLLSLGEKLGIGLTGLERGLAEETNTVQ 813 Query: 914 R 914 R Sbjct: 814 R 814 >UniRef50_B1M9U8 Conjugative relaxase domain protein n=5 Tax=Alphaproteobacteria RepID=B1M9U8_METRJ Length = 981 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 163/761 (21%), Positives = 274/761 (36%), Gaps = 89/761 (11%) Query: 19 DKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRLPDGADLSRMQDGSNRHRP 78 +D YY+ G G + ++D F L G P ++ H Sbjct: 30 KRDEYYLSDGGGVW-WSSGGTIVRHGAAIDAASFRDLCAGLHPGTGKPL-VRGAGPGHWA 87 Query: 79 GYDLTFSAPKSVSMMAMLGGDKR---LIDAHNQAVDFAVRQV--EALASTRVMTDGQSET 133 G D T + KSVS++ M G ++ + AH AV+ A+ V E L + R G +E Sbjct: 88 GVDCTMTPGKSVSVLWMAGTPEQRAAIEAAHRAAVERALSFVTAEGLVTVRTGAGG-TEQ 146 Query: 134 VLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKT-LSSDKVGKTGFIENVYAN 192 +L++ F+H T+R+ +P +HTH V NV + T E +YA Sbjct: 147 HRPRDLIVGRFDHYTTREGDPNIHTHCVFINVAGAPENAGAGRYKSRTHLTIEPERLYAA 206 Query: 193 QIAFGRLYREKLKEQVEA-LGYETEVVGKHGMWEMPGVP---VEAFSGRSQTIREAVGED 248 Q+ G YR L E + G + G+ G WE+ VP + AFS RS+ I G Sbjct: 207 QLGVGAAYRAALAEGLREQFGLQYREAGR-GQWEVACVPEALLAAFSKRSEQILAYAGAG 265 Query: 249 ASLKSRDVAALDTRKSKQHVDPE-IKMAEWMQTLKETGFDI-RAYRDAADQRADLRTLTP 306 AS R++AAL TR+ K+ + A W + L D A R A + Sbjct: 266 ASSAQREIAALATRRGKEELPTGPELEARWRKELAACAIDPWLAARHPERDPAFVMAAER 325 Query: 307 GPASQDGPDVQQA-----VTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGI 361 + D + + +A + L + D+L R + + ++ A + Sbjct: 326 DREREAPFDPPEIPGDSPMARAASALFRHESVVARKDLLQRALEVAGVAGIGVDAVEAEL 385 Query: 362 DEAISRE------QLIPLDREKGLFTSGIHVLDELSVRA-----LSRDIMKQNRVTVHPE 410 + + +TS E ++ L R + V Sbjct: 386 AQFERDGALLLLADAELVPGASACWTSPGIAACEAAMLRAADRPLERTWITPEAVEAALA 445 Query: 411 KSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADR 470 + + +AV A R +A++ G G+ A LV AR G V +A Sbjct: 446 DAPHLSPEQGEAVRHAA-GRDGVALLQAGAG-TGKTTTAAALVAAARGSGLRVIGLAPSW 503 Query: 471 RSQMNMKQDERLSGELITGRRQLLEGMA-------------FTPGSTVIVDQGEKLSLKE 517 + + + + + I RQ A + V+VD+ ++ ++ Sbjct: 504 VAADELGRSTGIPAQAIARWRQDQTQAAGPDAIHHPDRSAVLDADTLVMVDEAGMVATRD 563 Query: 518 TLTLLDGAARHNVQVLITDSGQRTGT---GSALMAM-----KDAGVNTYRWQGGE-QRPA 568 +L A +V++ ++ + SAL A+ + A + R Q E QR A Sbjct: 564 MEAVLSAARSVGAKVVLIGDRRQLASVGGASALRAVADVVGRSAVLEQVRRQTVEWQRAA 623 Query: 569 TIISEPDR----------NVRYARLAGDFAASVKA-----------GEESVAQVSGVREQ 607 +++ R +AG AA V+A GE+ + + Sbjct: 624 SVLMARGEVEAALRAYAARDRIELVAGAEAAQVRALAVWSEQRAAHGEDVLIVTRRNADA 683 Query: 608 AILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQW----NPET 663 A L R+ L+ +G LG +T+ A D R + G + + Sbjct: 684 AALNVQARAVLRGEGRLGPDLITLPAR-----DRDDRPVPLALAVGDALRFGESLPHLGL 738 Query: 664 RSHDRYVIDRVTAQSH---SLTLRDAQGETQVVRISSLDSS 701 R+ +R ++ +TA+ L L G V S L Sbjct: 739 RNGNRARVEAITAEPERGVRLRLALEDGRALEVAWSDLAQQ 779 Score = 207 bits (526), Expect = 4e-51, Method: Composition-based stats. Identities = 138/683 (20%), Positives = 226/683 (33%), Gaps = 131/683 (19%) Query: 822 RTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLA 881 A R P+F + +E+ + R P + A + + Sbjct: 308 LAARHPERDPAFVMAAERDRER----------EAPFDPPEIPGDSPMARAASALFRHESV 357 Query: 882 FSMVDLLTEAKS-FAAEGTGFTELGGEINAQIKRGDLLYVDVAKG--YGTGLLVSRASYE 938 + DLL A G G + E+ + G LL + A+ + S Sbjct: 358 VARKDLLQRALEVAGVAGIGVDAVEAELAQFERDGALLLLADAELVPGASACWTSPGIAA 417 Query: 939 AEKSILRHILEGKEAVMPLMERVPGELME--KLTSGQRAATRMILETSDRFTVVQGYAGV 996 E ++LR E E V L + L+ Q A R D ++Q AG Sbjct: 418 CEAAMLRAADRPLERTWITPEAVEAALADAPHLSPEQGEAVRHA-AGRDGVALLQAGAGT 476 Query: 997 GKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM-RSAGVDAQTLASFLHDTQL--- 1052 GK +A+ RV+GL P+ A E+ RS G+ AQ +A + D Sbjct: 477 GK----TTTAAALVAAARGSGLRVIGLAPSWVAADELGRSTGIPAQAIARWRQDQTQAAG 532 Query: 1053 ----QQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAP 1108 ++TL ++DE+ MV DM + + G + V GD QL ++ Sbjct: 533 PDAIHHPDRSAVLDADTLVMVDEAGMVATRDMEAVLSAARSVGAKVVLIGDRRQLASVGG 592 Query: 1109 GQPFRLQQTRSAADVAIMKEIVRQTPELREAVY-SLINRDVERALSGLESVKPSQVPRQE 1167 R A+++++ RQT E + A + +VE AL + ++ Sbjct: 593 ASALRAVADVVG-RSAVLEQVRRQTVEWQRAASVLMARGEVEAALRAYAARDRIELVAGA 651 Query: 1168 GAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQT 1227 A + ++ + E Sbjct: 652 EAAQVRA--------------------------------------LAVWSEQRAAHGEDV 673 Query: 1228 LIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDAL 1287 LIVT N D LN V G LG + + +P RD + R + DAL Sbjct: 674 LIVTRRNADAAALNVQARAVLRGEGRLGPDLITLP------ARDRDDRPVPLALAVGDAL 727 Query: 1288 VLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRF 1347 +++ H + R V T + R G R+R Sbjct: 728 RFGESLPH-----------------------LGLRNGNRARVEAITAEPER---GVRLRL 761 Query: 1348 TKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQG 1407 D G ++ ++ ++ R G++ + I AYA T + AQG Sbjct: 762 ALED-----------------GRALEVAWSDLAQQPRFGRKWPQPRIVHAYAGTVYAAQG 804 Query: 1408 ASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAH 1467 + + A+ G + + + YV L+R + +V + + DA+ Q Sbjct: 805 RTSSAAVMYVGAATDAREL------YVGLTRHRHEARVVVERDR--LDALCRQRQA---- 852 Query: 1468 DVFEPKPDREVMNAERLFSTARE 1490 D P D V+ ERLF AR Sbjct: 853 DARMPATDAMVL--ERLFREART 873 >UniRef50_D2S894 TrwC relaxase n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S894_9ACTO Length = 1836 Score = 233 bits (595), Expect = 4e-59, Method: Composition-based stats. Identities = 116/586 (19%), Positives = 193/586 (32%), Gaps = 85/586 (14%) Query: 39 EQLGLQGSVDKDVFTRLLEGRLPDGAD-----LSRMQDGSNRHRPGYDLTFSAPKSVSMM 93 E+ ++G V + +FT GR P A L+R + R GYDLTFS KSVS + Sbjct: 144 ERARIRGEVARGMFTEA-YGRPPADARELSGFLARASRLATRAVAGYDLTFSPVKSVSAL 202 Query: 94 AMLGG---DKRLIDAHNQAVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSR 150 L +R+ AH AV + +E A + G + V T L+ A+F H SR Sbjct: 203 WALAPREVAERVETAHAAAVADTLAWLEKHACFTRLGAGGARQVETTGLIAAVFTHRDSR 262 Query: 151 DQEPQLHTHAVVANVTQ-HNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQV- 208 +P LHTH V+N Q +G W+ + +Y +A Y +L+ + Sbjct: 263 AGDPDLHTHVAVSNKVQTDDGRWRAVDG---------RVLYKANVAASEHYNTRLEAHLV 313 Query: 209 EALGYET-----EVVGKHGMWEMPGVP---VEAFSGRSQTIREAVGEDA----------- 249 LG GK + E+ GV + +S R Q I G+ A Sbjct: 314 AGLGVHFAERPGREPGKRTVREVVGVDSGLLTTWSSRRQAIDVRRGQLAAGFQAEHGRPP 373 Query: 250 ----SLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLT 305 ++ A L+TR++K + + + A R R Sbjct: 374 TTSEAIALAQQATLETREAKHEPRSLAEQRAAWRKQALGVLGSPSDLAAMLDRVLGRAPA 433 Query: 306 PGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGI---- 361 P P+ V+ A +A +S ++ + + V A ++ + Sbjct: 434 PRPSGVPEVWVRSAAATVLATVSGQRASWQFWHVCAEAERLVRAAGLAPGDVDRAVSRVT 493 Query: 362 ---------------DEAISREQLIPLDREK-------GLFTSGIHVLDE--LSVRALSR 397 D + +L D +TS + E L A Sbjct: 494 ETALSPALSVPLGAPDAVVEPPELRRSDGASVYTVAGAQRYTSRAVLDAEALLVTAAGRT 553 Query: 398 DIMKQNRVTVH------PEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAE 451 D + + V G + V LA + + G AG+ +A Sbjct: 554 DGRRADPAVVELALLEATANGTELNPGQAQLVRDLAGSGARVQLAVAPAG-AGKTTALAT 612 Query: 452 LVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEG-------MAFTPGST 504 L G V +A + ++ + + L+ PG+ Sbjct: 613 LARAWTAGGGTVLGLAPSAVAAAVLRSALAGRCDTLAKLSWSLDAGTPPDWVAGIGPGTL 672 Query: 505 VIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSALMAM 550 V+VD+ E ++ R V + Q+ +A + Sbjct: 673 VVVDEAGMAGTVELARAVEHILRRGGSVRLVGDPQQLTAVAAGGVL 718 Score = 121 bits (303), Expect = 3e-25, Method: Composition-based stats. Identities = 60/237 (25%), Positives = 88/237 (37%), Gaps = 21/237 (8%) Query: 927 GTGLLVSRASYEAEKSILRHI--LEGKEAVMPLMERVPGELM---EKLTSGQRAATRMIL 981 G SRA +AE ++ +G+ A ++E E +L GQ R + Sbjct: 530 GAQRYTSRAVLDAEALLVTAAGRTDGRRADPAVVELALLEATANGTELNPGQAQLVRDLA 589 Query: 982 ETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGV-DA 1040 + R + AG GKTT + A + V+GL P+ A +RSA Sbjct: 590 GSGARVQLAVAPAGAGKTTALATLARA----WTAGGGTVLGLAPSAVAAAVLRSALAGRC 645 Query: 1041 QTLASFLHDTQLQQRSGETPDF-----SNTLFLLDESSMVGNTDMARAYALIAAGGGRAV 1095 TLA +G PD+ TL ++DE+ M G ++ARA I GG Sbjct: 646 DTLAKL----SWSLDAGTPPDWVAGIGPGTLVVVDEAGMAGTVELARAVEHILRRGGSVR 701 Query: 1096 ASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERAL 1152 GD QL A+A G A + ++VR A + L Sbjct: 702 LVGDPQQLTAVAAGGVLGEIAATHGA--VTLTQLVRFAEPAEAAATVALRDGDTTGL 756 Score = 64.5 bits (155), Expect = 4e-08, Method: Composition-based stats. Identities = 40/154 (25%), Positives = 58/154 (37%), Gaps = 18/154 (11%) Query: 1341 TGDRMRFTKSDRERGY------VANSVWTVTAVSGDSV--TLSDGQQTREIRPGQEQAEQ 1392 GD + ++DR +TV AV GD + G + R P E Sbjct: 834 AGDAVITRRNDRTLPLGASDWVKNGDRFTVHAVGGDGALAVVHTGTKRRLTLPAAYVGE- 892 Query: 1393 HIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVY---TDN 1449 H+ L YA T HGAQG + + +R+L+ YVALSR + +Y + Sbjct: 893 HVRLGYAATVHGAQGVTADTCHTVLTGAESRQLL------YVALSRGRSANHLYLSTVGD 946 Query: 1450 RQGWTDAINNAVQKGTAHDVFEPKPDREVMNAER 1483 + AV TA D+ R+ A Sbjct: 947 GDPHSIITPAAVHPPTATDLLVAMLARDDAQASA 980 >UniRef50_C3JH47 DNA primase catalytic core domain protein n=1 Tax=Rhodococcus erythropolis SK121 RepID=C3JH47_RHOER Length = 1568 Score = 233 bits (594), Expect = 5e-59, Method: Composition-based stats. Identities = 164/867 (18%), Positives = 286/867 (32%), Gaps = 119/867 (13%) Query: 66 LSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDK---RLIDAHNQAVDFAVRQVEALAS 122 ++ + + GYDL F+ KSVS++ LG D+ + AH AV+ + +E+ A+ Sbjct: 168 MAAQESKIRQPVAGYDLVFTPVKSVSVLWGLGDDEVRTAIEQAHKDAVNETLAWIESEAA 227 Query: 123 TRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH-NGEWKTLSSDKVG 181 E + T LV+A F+H +R+ +P LHTH V+N + +G W +L + + Sbjct: 228 LTRRGTAGVEQIDTHGLVIAQFDHFDNRNGDPNLHTHCAVSNKVRGIDGNWSSLDARVLH 287 Query: 182 KTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVG--KHGMWEMPGVPVEA---FSG 236 + N+I ++ R + +E G K + E+ GVP E FS Sbjct: 288 RIAVAGAARYNRIVADKISRA------LPVAFEDRSRGENKQPVREIAGVPQELLDGFSR 341 Query: 237 RSQTIREAVGEDASLKSR--------------DVAALDTRKSKQHVDPEIKMAEWMQTLK 282 R Q + A A ++ A L+TR KQ +A + + Sbjct: 342 RPQIMERANELMAEYRAEHGKNPSKVVQISLVQRATLETRSGKQTP---KSLAAMREEWR 398 Query: 283 ETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLAR 342 E ++ + A + D Q + A+ +S ++ +T +V Sbjct: 399 EQAVNMLGADGIDNLLATALSQDEPFIDVTEFDADQVASAAVERVSLQRSTWTEANVRTV 458 Query: 343 TVGILPPENGVIERARAGIDEAISREQL--------IPLDR-----------------EK 377 +L E E + L I LD+ +K Sbjct: 459 AEDMLSRVKFPSEEQANAAVELVVNRALHRDSLLVDISLDQMPEAMTRANGESTLTDHQK 518 Query: 378 GLFTSGIHVLDELSVRALSRD---------IMKQNRVTVHPEKSVPRTAGYSDAVSVLAQ 428 +TS + E + + + + P G LA Sbjct: 519 ARYTSTAMLDAEQRLLGAAHTPTVFTVSDSAFETALAYRENLEGRPFNKGQIALARHLAT 578 Query: 429 DRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELIT 488 LA+ G G G+ + + + QGR+V + + + +D + G I Sbjct: 579 SEALLAVGIGPAG-TGKTTSMKAVTDAWQAQGRDVIALGPSAAAATVLGEDIGVRGRTID 637 Query: 489 ---GRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGS 545 R +L A G+ ++VD+ S + L+ AA H V + + + Sbjct: 638 DILTRHRLGIDAAINRGAMLLVDESGMASTHQLDALVQIAAEHGAVVRLIGDPAQLSAVN 697 Query: 546 ALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVR 605 A + ++ D + R D + +++ GE S + Sbjct: 698 A-----GGALGLLARDTRAPELEEVVRFSDDDER------DISLALRKGEHS--VIEWYE 744 Query: 606 EQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRS 665 E+A L R EL L D+ + M P + + + Sbjct: 745 ERARLIGGSRDELLD-----------KILRDHLADTAAGSTSVMLAP----TTADAASLN 789 Query: 666 HDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPV-ADGERLRVTGKI 724 I V TL D + + R + + A G G Sbjct: 790 QGAQAIHLVNG-----TLTDGARTALTAGDHAYVGDIIVTRRNQNNITAVG------GTR 838 Query: 725 PGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSD 784 G RV GD V +V+E + V TLP + + E G+ T + Sbjct: 839 AGQRVENGDLWTVQAVTEHGIIAVHKRHGGTVTLP---NWYLTQHTELGYAHTIHRAQGM 895 Query: 785 SATVFASVTQMAMDNAT-LNGLA--RSGRDVRLYSS-LDETRTAEKLARHPSFTVVSEQI 840 + V S+ ++ L R G L + L + + + + V +I Sbjct: 896 TVDVARSLLGASVTREAGYVALTRGRHGNYAYLVTDELPDGDLDHQPDPVSTRSGVLAEI 955 Query: 841 KTRAGETSLETAISHQKSALHTPAQQA 867 R GE +A + AL + A Sbjct: 956 LDRRGEEI--SATEQLREALDRASDPA 980 Score = 130 bits (326), Expect = 6e-28, Method: Composition-based stats. Identities = 83/515 (16%), Positives = 152/515 (29%), Gaps = 86/515 (16%) Query: 863 PAQQAIHLALPVVESKKLAFSMVDLLTEAK------SFAAEGTGFTELGGEINAQIKRGD 916 A Q A+ V ++ ++ ++ T A+ F +E + +N + R Sbjct: 431 DADQVASAAVERVSLQRSTWTEANVRTVAEDMLSRVKFPSEEQANAAVELVVNRALHRDS 490 Query: 917 LLY----------------VDVAKGYGTGLLVSRASYEAEKSILRHILE------GKEAV 954 LL + S A +AE+ +L A Sbjct: 491 LLVDISLDQMPEAMTRANGESTLTDHQKARYTSTAMLDAEQRLLGAAHTPTVFTVSDSAF 550 Query: 955 MPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPE 1014 + GQ A R + + V G AG GKTT +AV A + Sbjct: 551 ETALAYRENLEGRPFNKGQIALARHLATSEALLAVGIGPAGTGKTTSMKAVTDA----WQ 606 Query: 1015 SERPRVVGLGPTHRAVGEM-RSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESS 1073 ++ V+ LGP+ A + GV +T+ L +L + + L+DES Sbjct: 607 AQGRDVIALGPSAAAATVLGEDIGVRGRTIDDILTRHRLGI---DAAINRGAMLLVDESG 663 Query: 1074 MVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQT 1133 M + + A G GD QL A+ G L + A ++E+VR + Sbjct: 664 MASTHQLDALVQIAAEHGAVVRLIGDPAQLSAVNAGGALGLLARDTRAP--ELEEVVRFS 721 Query: 1134 PELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQK 1193 + + + + + E Sbjct: 722 DDDERDISLALRKGEHSVIEWYE------------------------------------- 744 Query: 1194 AMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGE 1253 + L + I+RD+ T A ++++ D LN + G Sbjct: 745 --ERARLIGGSRDELLDKILRDHLADTA-AGSTSVMLAPTTADAASLNQGAQAIHLVNGT 801 Query: 1254 LGKEQVM------VPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLI 1307 L + + ++ R + + + ++ + G+I Sbjct: 802 LTDGARTALTAGDHAYVGDIIVTRRNQNNITAVGGTRAGQRVENGDLWTVQAVT-EHGII 860 Query: 1308 TLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTG 1342 + G T + P + + L TI G Sbjct: 861 AVHKRHGGTVTL-PNWYLTQHTELGYAHTIHRAQG 894 Score = 68.0 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 33/170 (19%), Positives = 56/170 (32%), Gaps = 34/170 (20%) Query: 1341 TGDRMRFTKSDRE----------RGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQA 1390 GD + ++ + +WTV AV+ + + + Sbjct: 818 VGDIIVTRRNQNNITAVGGTRAGQRVENGDLWTVQAVTEHGIIAVHKRHGGTVTLPNWYL 877 Query: 1391 EQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQH--VQVYTD 1448 QH +L YA T H AQG + A +L G R E+ YVAL+R + + TD Sbjct: 878 TQHTELGYAHTIHRAQGMTVDVARSLLGASVTR------EAGYVALTRGRHGNYAYLVTD 931 Query: 1449 NRQG----------------WTDAINNAVQKGTAHDVFEPKPDREVMNAE 1482 + ++ ++ +A + DR A Sbjct: 932 ELPDGDLDHQPDPVSTRSGVLAEILDRRGEEISATEQLREALDRASDPAR 981 >UniRef50_C6AF24 Conjugal transfer protein TraA n=2 Tax=Bartonella grahamii as4aup RepID=C6AF24_BARGA Length = 1236 Score = 232 bits (591), Expect = 1e-58, Method: Composition-based stats. Identities = 97/608 (15%), Positives = 200/608 (32%), Gaps = 113/608 (18%) Query: 854 SHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIK 913 K ++ + L ++ +K F+ DL + F ++ + + Sbjct: 266 EKIKQRSVEKIKENPNEVLKLISFEKSTFNRGDLAKIINRYVDNANDFNDIMVRLE---Q 322 Query: 914 RGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVM------------PLMERV 961 +L+ + + ++ + E + R ++ + +E Sbjct: 323 SNNLIKIKDHSNPHKVIYSTKEILKTEYDMERSVVSLSQTTGHGVKDRQVLEAIKSVENK 382 Query: 962 PGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVV 1021 K + Q+ A + I V GYAG GK+T ++ A N+ + RV Sbjct: 383 DKSNRFKFSEEQKLAVQHI-TDDKGIAAVVGYAGAGKST----LLEAANIAWVNSGKRVF 437 Query: 1022 GLGPTHRAVGEMRSAG-VDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDM 1080 G +A + + + ++TLA++ +L ++ + +F++DE+ MV + + Sbjct: 438 GAALAGKAAEGLEESSKIKSKTLAAW----ELAWKNKKDELRVGDVFVIDEAGMVSSKQL 493 Query: 1081 ARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPEL-REA 1139 + + G + V GD QLQ I G FR + I RQ E ++A Sbjct: 494 SHFVQKVEKAGAKIVLVGDNMQLQPIEAGAAFRAVVDNIG--YVELSGIRRQKEEWGQDA 551 Query: 1140 VYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGE 1199 V+ AL ++ + + + ++ + ++ L+G Sbjct: 552 SRQFARGQVKEALDHYKNRGFVRETKTRDQAINTLVKDWMNTRRKVEQKCEEEGKTLRG- 610 Query: 1200 AFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQV 1259 ++ L++ H N + LN I + A L E Sbjct: 611 -------------------------DELLVLAHTNASVKKLNEEIRTALKDARLLKSED- 644 Query: 1260 MVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLI 1319 +A++ + + R D ++ ++N G ++ Sbjct: 645 ------SASVTNFDTLRGHREFVVGDRIIFLENAQFEE----------RYATELGKQKVK 688 Query: 1320 SPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQ 1379 + + T+++R + + V SG V S+ Sbjct: 689 NGMLGT-------------------VLSTQNERGKPLL-----KVRLDSGQEVVFSN--- 721 Query: 1380 TREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRM 1439 Q Q++D YA T H +QG + L + ++ L YVA+SR Sbjct: 722 ---------QTYQNVDHGYAATVHKSQGVTVDNVFVLASSSMDQHLS------YVAMSRH 766 Query: 1440 KQHVQVYT 1447 + +Y Sbjct: 767 RHQSHLYV 774 Score = 87.6 bits (215), Expect = 4e-15, Method: Composition-based stats. Identities = 70/591 (11%), Positives = 181/591 (30%), Gaps = 76/591 (12%) Query: 303 TLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGID 362 + +++ + + +S K F D LA+ + ++ Sbjct: 263 QANEKIKQRSVEKIKENPNEVLKLISFEKSTFNRGD-LAKIINRYVDNANDFNDIMVRLE 321 Query: 363 EAISREQLIPL----DREKGLFTSGIHVLDELSVRALSRDIMKQNRVTV----------- 407 + LI + + K ++++ + E + + + V Sbjct: 322 Q---SNNLIKIKDHSNPHKVIYSTKEILKTEYDMERSVVSLSQTTGHGVKDRQVLEAIKS 378 Query: 408 ----HPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREV 463 + AV + D+ A+V G AG+ + + G+ V Sbjct: 379 VENKDKSNRFKFSEEQKLAVQHITDDKGIAAVVGYAG--AGKSTLLEAANIAWVNSGKRV 436 Query: 464 QIIAADRRSQMNMKQDERLSGELITG--RRQLLEGMAFTPGSTVIVDQGEKLSLKETLTL 521 A ++ +++ ++ + + + G ++D+ +S K+ Sbjct: 437 FGAALAGKAAEGLEESSKIKSKTLAAWELAWKNKKDELRVGDVFVIDEAGMVSSKQLSHF 496 Query: 522 LDGAARHNVQVLITDSG---QRTGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNV 578 + + ++++ Q G+A A+ D N+ Sbjct: 497 VQKVEKAGAKIVLVGDNMQLQPIEAGAAFRAVVD------------------------NI 532 Query: 579 RYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVW 638 Y L+G + G+++ Q + + + L + + + L W Sbjct: 533 GYVELSGIRRQKEEWGQDASRQFARGQVKEALDHYKNRGFVRETK--TRDQAINTLVKDW 590 Query: 639 LDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSL 698 +++R + + G + +H + ++ + + L+DA+ + S Sbjct: 591 MNTRRKVEQKCEEEGKTLRGDELLVLAHTNASVKKLNEEIRT-ALKDAR-----LLKSED 644 Query: 699 DSSWSLFR--PEKMPVADGERLRVTGK----------IPGLRVSGGDRLQVASVSEDAMT 746 +S + F G+R+ + +V G V S + Sbjct: 645 SASVTNFDTLRGHREFVVGDRIIFLENAQFEERYATELGKQKVKNGMLGTVLSTQNERGK 704 Query: 747 VVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSA-TVFASVTQMAMDNATLNGL 805 ++ R + V S T +++G+ T S + VF + + + + Sbjct: 705 PLLKVRLDSGQ-EVVFSNQTYQNVDHGYAATVHKSQGVTVDNVFVLASSSMDQHLSYVAM 763 Query: 806 ARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQ 856 +R LY + ++ + ++ ++ ++ ETA + Sbjct: 764 SRHRHQSHLYVAEEDFKNVRLHEHKQVKGTITGELVEAGYDSFSETAKTKT 814 >UniRef50_B8KYV8 Putative trwC protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8KYV8_9GAMM Length = 975 Score = 230 bits (586), Expect = 4e-58, Method: Composition-based stats. Identities = 136/751 (18%), Positives = 240/751 (31%), Gaps = 136/751 (18%) Query: 2 MSIAQVRSAGSAG--------NYYTDKDNYYVLGSMGERWAGRGAEQLGL-QGSVDKDVF 52 ++ S A YY DKD W G+ A L L +V ++ Sbjct: 7 LTAQGTDSKSGAAVVEYLMLTEYYLDKDG---NAQDTMAWGGKMAAHLNLLSTAVTRESM 63 Query: 53 TRLLEGRLPDGAD-LSRMQDGSNRHRP--------------------------GYDLTFS 85 ++L EG P L + + RP GYD+T S Sbjct: 64 SKLAEGFDPQTGRALCQNAGQKGKVRPKVDKNGDPVLDAQGKPEVVVVGGHRVGYDVTVS 123 Query: 86 APKSVSMMAMLGGDKR---LIDAHNQAVDFAVRQVEALASTRVMTDGQSETVLTGNLVMA 142 APK V ++ + +R ++ AH A A+ ++E + TR G+ + LV + Sbjct: 124 APKDVGILFAMESPERRDAVLKAHQAASAEAMNRLEQMVETRRGKGGKD-VIGVKGLVWS 182 Query: 143 LFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYRE 202 H RD + LHTH +V V L +D T +Y + A +Y+ Sbjct: 183 SHQHFAGRDLDMDLHTHHLVYGV--------ALGADGKESTFDAVEIYRHARAMDEIYKL 234 Query: 203 KLKEQVEALGYETEVVGK---------HGMWEMPGVP---VEAFSGRSQTIREAVGEDAS 250 +L + ++ LGY+ E V + + G+ ++ FS R + + E + Sbjct: 235 ELYKNLQGLGYQVEHVRELDDDGKETNRSYARLAGIDQDVIDHFSKRRKALLEYAEQHGV 294 Query: 251 LKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQ-RADLRTLTPGPA 309 S A TRK K + W + LK GFD+ A Q D Sbjct: 295 --STQQANKATRKHKNEPTYTELVEHWQEALK--GFDLTPETLKAAQGNLDKVEHKSDAE 350 Query: 310 SQDGPDVQQAVTQAIAGLS----ERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAI 365 + +AV I + E + + AR V+ A DE Sbjct: 351 LLELLHENEAVFNDIDLVRVLGMEYAGKLDAAGLHARIEQFKQDNGLVLVNAERLADE-- 408 Query: 366 SREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVH------------PEKSV 413 R Q + + F + + E +V ++ + + K Sbjct: 409 DRGQTLARKHTEDRFCAPWMLQAEQAVVDIANRRANETQHHASQATVDRVIEDYQKAKGF 468 Query: 414 PRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQ 473 + AV+ + + +A +SG G G+ +G + + ++ Sbjct: 469 QLSQEQLVAVNHICRGSGGVANLSGLAG-TGKTTISELYKEALESEGMVLLGVCVSNKAA 527 Query: 474 MNMKQDERLSGELITGRRQLLE--GMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQ 531 ++ + + + L P +++D+ + ++T LL A + + Sbjct: 528 QKLEGESGMPSVSMAQMLHDLAEGKRELQPNDVLVIDEAGMVDTRDTRALLAYAEKAKSK 587 Query: 532 VLITDSG---QRTGTGSALMAMKDAG----VNTYRWQGGEQRPA---------------- 568 V++ Q G GS K A + R Q ++ Sbjct: 588 VILQGDAEQLQPIGAGSGFQLTKQAVGDVKLTEIRRQARQEDRETAMGFYAKNENGEVVD 647 Query: 569 ------------------------TIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGV 604 +I+ + RL D+ + A ++ + Sbjct: 648 LKKGTRSRRETLELGDEQKERLMDSIVEAHSQEKCIERLVNDYFKNPAALDDKLVLAHSR 707 Query: 605 REQAILTQAIRSELKTQGVLGLPEVTMTALS 635 E L IR LK +G +G EV + Sbjct: 708 AEVGALNAGIRKGLKERGEIGTDEVVVEGRV 738 Score = 205 bits (520), Expect = 2e-50, Method: Composition-based stats. Identities = 135/773 (17%), Positives = 252/773 (32%), Gaps = 140/773 (18%) Query: 813 RLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSL-ETAISHQKSALHTPAQQAIHLA 871 S+ + K P++T + E + L + + L ++ Sbjct: 292 HGVSTQQANKATRKHKNEPTYTELVEHWQEALKGFDLTPETLKAAQGNLDKVEHKSDAEL 351 Query: 872 LPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVD---------- 921 L ++ + F+ +DL+ A L I + L+ V+ Sbjct: 352 LELLHENEAVFNDIDLVRVLGMEYAGKLDAAGLHARIEQFKQDNGLVLVNAERLADEDRG 411 Query: 922 --VAKGYGTGLLVSRASYEAEKSILRHIL---------EGKEAVMPLMERVPGELMEKLT 970 +A+ + + +AE++++ + V ++E +L+ Sbjct: 412 QTLARKHTEDRFCAPWMLQAEQAVVDIANRRANETQHHASQATVDRVIEDYQKAKGFQLS 471 Query: 971 SGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAV 1030 Q A I S + G AG GKTT A+ ESE ++G+ +++A Sbjct: 472 QEQLVAVNHICRGSGGVANLSGLAGTGKTTISELYKEAL----ESEGMVLLGVCVSNKAA 527 Query: 1031 GEMR-SAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAA 1089 ++ +G+ + ++A LHD G+ N + ++DE+ MV D A Sbjct: 528 QKLEGESGMPSVSMAQMLHDL----AEGKRELQPNDVLVIDEAGMVDTRDTRALLAYAEK 583 Query: 1090 GGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVE 1149 + + GD +QLQ I G F+L T+ A + EI RQ + D E Sbjct: 584 AKSKVILQGDAEQLQPIGAGSGFQL--TKQAVGDVKLTEIRRQARQ----------EDRE 631 Query: 1150 RALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLY 1209 A+ + +V + E Q+ +L ++ +A + Sbjct: 632 TAMGFYAKNENGEVVDLKKGTRSRRETLELGDEQKERLMDSIVEAHSQE--------KCI 683 Query: 1210 EAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANI 1269 E +V DY + P A + L++ H + LN+ I ++ GE+G ++V+V N Sbjct: 684 ERLVNDYF-KNPAALDDKLVLAHSRAEVGALNAGIRKGLKERGEIGTDEVVVE--GRVNG 740 Query: 1270 RDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGV 1329 R +L + R+ +K L + + + I + + Sbjct: 741 RKFDLALVEG---------------DRVMFTAKSKDLGVVNGTQATIQSIKASRSGGYDI 785 Query: 1330 TLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQ 1389 G ++ + + + Sbjct: 786 VGALRSENPKENGRKVVWNTHEHKA----------------------------------- 810 Query: 1390 AEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSR-MKQHVQVY-- 1446 + YA+T H +QG + L M S+ VA +R K H ++Y Sbjct: 811 ----VVHDYAVTVHKSQGQGKREVFHLM-----NLGMMDNASSLVAFTRLTKGHYRLYGT 861 Query: 1447 TDNRQGWTDAINNAVQKGTAHD-----------------VFEPKPDREVMNAERLFSTAR 1489 D+ + + K T D V P R R+ Sbjct: 862 YDDVEQLNTRLGLERLKATVLDAGLKDDPQRPVVQRPGAVARPTTQRPAAQRTRIQGKLD 921 Query: 1490 ELRDVAAGRAVLRQAGLAGGDSPARF----IAPGRKYPQPYVALPAFDRNGKS 1538 L A R + ++ G+ AR+ + P R+ Q LPA N + Sbjct: 922 ALLKEHAERP---KPQMSEGERKARWLLEVLEPLRRARQASPKLPAQSPNHRQ 971 >UniRef50_Q21BL3 Putative ATP-dependent exoDNAse (Exonuclease V) alpha subunit n=1 Tax=Rhodopseudomonas palustris BisB18 RepID=Q21BL3_RHOPB Length = 379 Score = 228 bits (581), Expect = 2e-57, Method: Composition-based stats. Identities = 104/332 (31%), Positives = 151/332 (45%), Gaps = 27/332 (8%) Query: 3 SIAQVRSAGSAGNYYT--DKDNYYV-LGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGR 59 SI+ +A SA YY +D+YY G RWAGRGAE+L L V + F L+G Sbjct: 4 SISARGNAASALRYYAHLQRDDYYSREGEPPGRWAGRGAERLSLVEPVTQGEFDAALQGV 63 Query: 60 LP-DGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGD---KRLIDAHNQAVDFAVR 115 P G L+++ H G+D+TFSAPKSVS++ L + + H AV A Sbjct: 64 DPKTGERLAQIGGRGREHSAGWDMTFSAPKSVSVLWALSDAHDREGIEQGHRSAVLAATA 123 Query: 116 QVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVT-QHNGEWKT 174 ++EA A G + T L+MA F+H TSR+ +PQLHTHA + N+ + +G W Sbjct: 124 RLEATAGWARRGRGGATRERTAGLLMAQFDHHTSRESDPQLHTHAFIFNLAPRRDGSWGA 183 Query: 175 LSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVE-- 232 + S +Y Q G YR+ L ++E G E + + + +P + Sbjct: 184 ILS---------RELYKAQKHAGATYRQALASELERRGIRLER--QKDTFRVAAIPRDVE 232 Query: 233 -AFSGRSQTIREAVGEDA--SLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIR 289 AFS R Q I EA + K ++A L TR+ KQ + W K GF++ Sbjct: 233 RAFSKRRQAIEEAARIHGYSTPKGMELATLRTRRPKQDARLGDLIKHWQAEAKALGFELD 292 Query: 290 AYRDAADQRADLRTLTPGPASQDGPDVQQAVT 321 R A T + P D+ A + Sbjct: 293 QDRQHTRAMA---TSSARPLRALLADLSNAAS 321 >UniRef50_Q8RMJ7 TraA n=3 Tax=Corynebacterium RepID=Q8RMJ7_CORDI Length = 1116 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 164/943 (17%), Positives = 306/943 (32%), Gaps = 146/943 (15%) Query: 1 MMSIAQVRSAGSAGNYYTDK-------DNYYVLG--SMGERW--AGRGAEQLGLQGS--- 46 M++IA++ + A YY D+YY W + +E G+ Sbjct: 1 MLTIAKMGAHSVA--YYQSTVDENRGPDSYYSEDGKQPASVWLRGEKLSEVSAFLGTDNG 58 Query: 47 --VDKDVFTRLLE-GRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLI 103 V P GA L + PG+DLTF APKSVS++ +G D + Sbjct: 59 AIVSGKTVENWFNKAVAPSGAGLGNAPRKDS--VPGFDLTFCAPKSVSLLWGMGADSDVR 116 Query: 104 ----DAHNQAVDFAVRQVEALASTRVM-----TDGQSETVLTGNLVMALFNHDTSRDQEP 154 +AH AV A+ + A + + + H TSR +P Sbjct: 117 GIVDEAHQAAVSQALDYLSEHAGYTRKQVKEPAGKRLVVEKLAGISGVKYEHRTSRAGDP 176 Query: 155 QLHTHAVVANV-TQHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQV-EALG 212 +H+H ++AN +G+ +TL ++Y A G +Y+ ++E + + LG Sbjct: 177 HVHSHVLLANKQLCRDGKVRTLDG---------VSLYHEARAAGMVYQATVREILSQKLG 227 Query: 213 YETEVVGKHGMWEMPGVP----VEAFSGRSQTIREAVGEDA---SLKSRDVAALDTRKSK 265 E V +G E+ G+ + ++S R++ I + ++ +A TR++K Sbjct: 228 VEFGDV-VNGCAEIVGLDDPELIASYSTRAREIDQWQADNGLETRAAYERIAQKITRRTK 286 Query: 266 QHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIA 325 P ++ E G +R + A L A + D +Q +A Sbjct: 287 DTDTPLEELEIEWARA-EHGAQVREFV------AGLEPKNEADARESSEDFLPKPSQILA 339 Query: 326 GLSERKVQFTYTDVLARTVGILPPENGVIER----ARAGIDEAISRE-----------QL 370 ++ + FT DV + ++ P E +D A++ +L Sbjct: 340 EVAAERSTFTRADVAEKVAELIRPGAISPEDMTVTVEGLVDAALAAHGTWSVTPEKSREL 399 Query: 371 IPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSV--PRTAGYSDAVSVLAQ 428 RE + + V+DE+ + VT + V + +DA+ + Sbjct: 400 DSTQREGSQKYTTVEVVDEVERGVDMATARVERGVTAESIQPVEGELSPAQADAMRAVVG 459 Query: 429 DRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELIT 488 ++V G AG+ + G+ V +A ++ M E ++ E +T Sbjct: 460 SDYLASVVVAPAG-AGKTSSLKSAHHAWNMAGKHVIGLAPTGKAADVMVG-ENVADESMT 517 Query: 489 GRRQLLEGMAFTPGST-----------VIVDQGEKLSLKETLTLLDGAARHNVQVLITDS 537 R + P T V+VD+ +S +T+ +L+ A +V+ Sbjct: 518 IARAFVGTDDLIPEHTAVKLGWNRDTVVVVDEAGMVSNPDTIRVLETATAAGARVVFVGD 577 Query: 538 GQRTGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEES 597 ++ A + E A + E F E+ Sbjct: 578 PEQYSAVKARSGLLA-------TLSHELPDAVELREV------------FRQRDAGEREA 618 Query: 598 VAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRP--GMV 655 + G E + + + W R Sbjct: 619 SKWLRGGEEADV-----------------------SRAAEWYMQNKRLHAGSVTAMMDDA 655 Query: 656 MEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADG 715 + W +T + + ++ V A +T +A + ++ L + + G Sbjct: 656 LAGWRDDTAAGKQSLL--VAATRDQVTALNAAAQKIRAERGEINPEHRLGLSDGLTAGVG 713 Query: 716 ERLRVTGKIPGLRVSGGDRLQ------VASVSEDAMTVVVPGRAEPATLPVSDSPFTALK 769 + + L S GD ++ V S+ +D + AT+ ++ + Sbjct: 714 DVILTRRNDAKLVTSNGDVVRNGQRWVVDSIGKDGSITARRCDDDLATVTLNRD-YLDKH 772 Query: 770 LENGWVETPGHSVS---DSATVFASVTQMAMDNATLNGLARSGRDVRLY---SSLDETRT 823 + G+ T S D A V A V + + + R LY + +T T Sbjct: 773 TQLGYAATGHSSQGATVDVARVVAGVGNLDKSSV-YVPMTRGREGNFLYIAETQPGDTET 831 Query: 824 AEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQ 866 E + + AL A+Q Sbjct: 832 GHGQVSQIIRRESDEYARDLLVSAGMREQGDKTPQALFGQAKQ 874 Score = 150 bits (377), Expect = 7e-34, Method: Composition-based stats. Identities = 72/391 (18%), Positives = 136/391 (34%), Gaps = 59/391 (15%) Query: 875 VESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSR 934 + + + ++ L+ A + + E E+++ + G Y V V Sbjct: 366 ISPEDMTVTVEGLVDAALAAHGTWSVTPEKSRELDSTQREGSQKYTTVEVVDEVERGVDM 425 Query: 935 ASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYA 994 A+ E+ + E++ P+ +L+ Q A R ++ + +VV A Sbjct: 426 ATARVERGV------TAESIQPV--------EGELSPAQADAMRAVVGSDYLASVVVAPA 471 Query: 995 GVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGV--DAQTLASFL---HD 1049 G GKT+ ++ A NM V+GL PT +A M V ++ T+A D Sbjct: 472 GAGKTSSLKSAHHAWNMA----GKHVIGLAPTGKAADVMVGENVADESMTIARAFVGTDD 527 Query: 1050 TQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPG 1109 + + + +T+ ++DE+ MV N D R A G R V GD +Q A+ Sbjct: 528 LIPEHTAVKLGWNRDTVVVVDEAGMVSNPDTIRVLETATAAGARVVFVGDPEQYSAVKAR 587 Query: 1110 QPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGA 1169 + D ++E+ RQ + Sbjct: 588 SGLLATLSHELPDAVELREVFRQRDAGEREASKWLRG----------------------- 624 Query: 1170 WAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLI 1229 +EA ++ A + M + + + + T A +Q+L+ Sbjct: 625 ------------GEEADVSRAAEWYMQNKRLHAGSVTAMMDDALAGWRDDTA-AGKQSLL 671 Query: 1230 VTHLNEDRRVLNSMIHDVREKAGELGKEQVM 1260 V + LN+ +R + GE+ E + Sbjct: 672 VAATRDQVTALNAAAQKIRAERGEINPEHRL 702 Score = 61.8 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 58/168 (34%), Gaps = 23/168 (13%) Query: 1341 TGDRMRFTKSDRERG------YVANSVWTVTAV-SGDSVTLSD-GQQTREIRPGQEQAEQ 1392 GD + ++D + W V ++ S+T + ++ ++ Sbjct: 712 VGDVILTRRNDAKLVTSNGDVVRNGQRWVVDSIGKDGSITARRCDDDLATVTLNRDYLDK 771 Query: 1393 HIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVY------ 1446 H L YA T H +QGA+ A + G S YV ++R ++ +Y Sbjct: 772 HTQLGYAATGHSSQGATVDVARVVAGV-----GNLDKSSVYVPMTRGREGNFLYIAETQP 826 Query: 1447 --TDNRQGWTDAINNAVQKGTAHDVFEPKPDREV--MNAERLFSTARE 1490 T+ G I A D+ RE + LF A++ Sbjct: 827 GDTETGHGQVSQIIRRESDEYARDLLVSAGMREQGDKTPQALFGQAKQ 874 >UniRef50_A5CLM4 Putative conjugal transfer protein, Dtr system n=1 Tax=Clavibacter michiganensis subsp. michiganensis NCPPB 382 RepID=A5CLM4_CLAM3 Length = 1492 Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats. Identities = 180/939 (19%), Positives = 301/939 (32%), Gaps = 137/939 (14%) Query: 48 DKDVFTRLLEGRLP-DGADLSRMQDGSNR----HRPGYDLTFSAPKSVSMMAMLGGDK-- 100 F +GR P D +L + + R G+DL S KSVS++ LG + Sbjct: 152 GAQAFRDA-KGREPADKEELGKFITAATRPDQTAVAGFDLVCSPSKSVSVLWALGDTETR 210 Query: 101 -RLIDAHNQAVDFAVRQVEALA-STRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHT 158 + A QAV + +E A +TR T+G ++ + G + +F H SR+ +PQLH Sbjct: 211 KAIEAAQEQAVRDTIGYLEREAIATRAGTNGVAQIEVEGGIAATVFRHYDSRNGDPQLHD 270 Query: 159 HAVVANVTQH-NGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEV 217 H VVAN + +G+W+T+ S + + + + N + R LG T Sbjct: 271 HVVVANKVKGVDGKWRTIDSKLLHRMNVPASEFYNAAVMSEVCR--------RLGVTTTA 322 Query: 218 V----GKHGMWEMPGVP---VEAFSGRSQTIRE---------------AVGEDASLKSRD 255 GK + E+ GV ++ FS RS +IR A + Sbjct: 323 RVPSPGKRPVMEIAGVDPDLIDTFSSRSASIRATTERLVEEYQRDHGRAPDAKTLIAIAQ 382 Query: 256 VAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPD 315 A L+TR K V + E G AA R L P + Sbjct: 383 QATLETRPQKDDVRSPQAIHEAAVARVGAG-------RAAGLVDAARALAPTNKEAASVE 435 Query: 316 VQQAVTQAIAGLSERKVQFTYTDVLARTVGILP--------PENGVIERARAGIDEAI-- 365 V + + + E + + A L E V + RA + ++ Sbjct: 436 VDEITAHVLRTVEEHHAVWGAHVIEAEARRHLAALIPDQSVAEPLVQQVTRAALGGSVTL 495 Query: 366 --------------SREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEK 411 S I + K LFTS + E + +R E+ Sbjct: 496 TPPSPHGAFTPLTRSDGSSIYDHKGKTLFTSTRILDAEDQLLDAARTRTVSPISRDTFER 555 Query: 412 SV-----PRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQII 466 + P AG D A L + G G AG+ + + GR + + Sbjct: 556 TAAQHTGPLDAGQRDLAREFATSDRELVVGIGPAG-AGKTTALRLAATALEDGGRRMIGL 614 Query: 467 AADRRSQMNMKQDERLSGELITGRR------QLLEGMAFTPGSTVIVDQGEKLSLKETLT 520 A + + + + I G +L G ++VD+ + Sbjct: 615 APSAPAASVIAEAVGIEATTIHGFLTAHAQAELPAKYEVRAGDVLVVDEAGMAGTQRLAA 674 Query: 521 LLDGAARHNVQV-LITDSGQRTG--TGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRN 577 L A + V LI D Q + G AL + D V + R + + +E + Sbjct: 675 LHTIAREYGAHVRLIGDDRQLSAVEAGGALR-LIDREVGSVRLEHVHRFQDADEAEASLH 733 Query: 578 VRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPV 637 +R GD A +A + + + +T A+ + +T +GL + + Sbjct: 734 LRDPLRPGDPFAWYQANDRVI-----GGDVDRMTDAVFAGWQTDTDVGLRSLMLAPTGAT 788 Query: 638 WLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISS 697 + +R G V + S+ LRD Sbjct: 789 VTELNARAQAHRIAAGTVT--------------------GTRSVKLRD------------ 816 Query: 698 LDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASV-SEDAMTVVVPGRAEPA 756 S + + E L RV GD QV + ++ ++ VV A P Sbjct: 817 ---DLSAHVGDVIATRRNESLLRIQNGRD-RVKNGDLWQVTRIGADGSLDVVHRDHAAPV 872 Query: 757 TLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYS 816 TLP ++L + ++ + M + A GL R + RLY Sbjct: 873 TLPAGY-VREHVELGYARTISRSQGLTADTSHVLGDESMTRETA-YTGLTRGKQSNRLYL 930 Query: 817 SLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVE 876 A+ A + ++ + A + L T Q +A E Sbjct: 931 E-----VADGAAVGDALEQIATRSDAMLSAHETIRAEQDRVDDLVTLIDQHADVAERAGE 985 Query: 877 SKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRG 915 + + V L T + + + + G Sbjct: 986 IRYGRIAEVALGTRLATTLQSQESWGAVAAALRHAEDYG 1024 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 103/578 (17%), Positives = 171/578 (29%), Gaps = 81/578 (14%) Query: 795 MAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAIS 854 A D TL +A+ L + + A H + + + Sbjct: 370 RAPDAKTLIAIAQQAT---LETRPQKDDVRSPQAIHEAAVARVGAGRAAGLVDAARALAP 426 Query: 855 HQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKR 914 K A + L VE + + EA+ A + + Q+ R Sbjct: 427 TNKEAASVEVDEITAHVLRTVEEHHAVWGAHVIEAEARRHLAALIPDQSVAEPLVQQVTR 486 Query: 915 GDLLYVDVA---------------------KGYGTGLLVSRASYEAEKSILRHILEGKEA 953 L G L S +AE +L Sbjct: 487 AALGGSVTLTPPSPHGAFTPLTRSDGSSIYDHKGKTLFTSTRILDAEDQLLDAART--RT 544 Query: 954 VMPL----MERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAV 1009 V P+ ER + L +GQR R + V G AG GKTT R +A+ Sbjct: 545 VSPISRDTFERTAAQHTGPLDAGQRDLAREFATSDRELVVGIGPAGAGKTTALRLAATAL 604 Query: 1010 NMLPESERPRVVGLGPTHRAVGEMRSA-GVDAQTLASFLHDTQLQQRSGETPDFSNTLFL 1068 E R++GL P+ A + A G++A T+ FL + + + + + Sbjct: 605 ----EDGGRRMIGLAPSAPAASVIAEAVGIEATTIHGFLTAHAQAELPAKYEVRAGDVLV 660 Query: 1069 LDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKE 1128 +DE+ M G +A + + G GD QL A+ G RL + ++ Sbjct: 661 VDEAGMAGTQRLAALHTIAREYGAHVRLIGDDRQLSAVEAGGALRLIDREVGS--VRLEH 718 Query: 1129 IVR-QTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKL 1187 + R Q + EA L + P AW + Sbjct: 719 VHRFQDADEAEASLHL---------------RDPLRPGDPFAWYQAN------------- 750 Query: 1188 AEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDV 1247 + +A+ + T + ++L++ LN+ Sbjct: 751 ----------DRVIGGDVDRMTDAVFAGWQTDT-DVGLRSLMLAPTGATVTELNARAQAH 799 Query: 1248 REKAGEL-GKEQVMVPVLNTANIRD--GELRRLSTWETHRDALVLVDNVYHRIAGISKDD 1304 R AG + G V + +A++ D R S + + ++ I D Sbjct: 800 RIAAGTVTGTRSVKLRDDLSAHVGDVIATRRNESLLRIQNGRDRVKNGDLWQVTRIGADG 859 Query: 1305 GLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTG 1342 L + + P V E V L TI G Sbjct: 860 SLDVVHRDHAAPVTL-PAGYVREHVELGYARTISRSQG 896 Score = 56.0 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 66/195 (33%), Gaps = 21/195 (10%) Query: 1296 RIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKS----- 1350 R ++ +T +A I+ ++ D + GD + ++ Sbjct: 778 RSLMLAPTGATVTELNARAQAHRIAAGTVTGTR-SVKLRDDLSAHVGDVIATRRNESLLR 836 Query: 1351 --DRERGYVANSVWTVTAV-SGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQG 1407 + +W VT + + S+ + + +H++L YA T +QG Sbjct: 837 IQNGRDRVKNGDLWQVTRIGADGSLDVVHRDHAAPVTLPAGYVREHVELGYARTISRSQG 896 Query: 1408 ASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQG------WTDAINNAV 1461 + + L R E+AY L+R KQ ++Y + G + Sbjct: 897 LTADTSHVLGDESMTR------ETAYTGLTRGKQSNRLYLEVADGAAVGDALEQIATRSD 950 Query: 1462 QKGTAHDVFEPKPDR 1476 +AH+ + DR Sbjct: 951 AMLSAHETIRAEQDR 965 Score = 51.4 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 15/80 (18%) Query: 1 MMSIAQVRSAGSAGNYYTDK-------------DNYYVLGSMGERWAGRGAEQLGLQGSV 47 MM++ V SAG YYT + D Y V G+ RW GRGA+ LG+ G+V Sbjct: 8 MMTMH-VLSAGDGYTYYTSEVATGDAKRDRELGDYYTVDGNPPGRWMGRGADVLGVSGTV 66 Query: 48 DKDVFTRLL-EGRLPDGADL 66 ++ L EG PD + Sbjct: 67 TEEQMKALYGEGLHPDADRI 86 >UniRef50_B9JRK7 Ti-type conjugative transfer relaxase TraA n=9 Tax=Rhizobiales RepID=B9JRK7_AGRVS Length = 1105 Score = 227 bits (577), Expect = 5e-57, Method: Composition-based stats. Identities = 126/711 (17%), Positives = 237/711 (33%), Gaps = 164/711 (23%) Query: 805 LARSGRDVRL--YSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHT 862 L R+G DVR+ S+L+ E ++ + T ++ + + +AL Sbjct: 193 LVRAGLDVRIDHRSNLERGLEIEPTEHMGVHASQMDRRGLQVSRTRMDAKAAKRNAALIR 252 Query: 863 PAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDV 922 + + L ++ +K F D+ + + A + L+ + Sbjct: 253 EKPEQV---LSILTGEKSVFDRHDVARALHRYIDD---HQAFQNAFAAVMASPALVELRP 306 Query: 923 AKGYGTGLLVSRASYEAEKSILRHILEG-------------------------------- 950 + +R E E ++ Sbjct: 307 EQNGELARYSTREMLEIEHAMAASADRMSQSPHHGVRRHHVDQALAFQNAAIKSMTASSL 366 Query: 951 -----KEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAV 1005 + + P ++R L+ QR A I + + V G+AG GK+T A Sbjct: 367 SLKVERGELRP-VDRERAIERSGLSDEQRLAVAHITGHA-QIAAVIGFAGAGKSTMLAAA 424 Query: 1006 MSAVNMLPESERPRVVGLGPTHRAVGEMRSA-GVDAQTLASFLHDTQLQQRSGETPDFSN 1064 A E + RV G +A + + G+ ++TLAS+ + ++G+ Sbjct: 425 RDA----WERQGYRVHGAALAGKAAEGLEESSGIASRTLASW----EYGWQAGKGQLGKG 476 Query: 1065 TLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVA 1124 + ++DE+ MVG+ +AR A G + V GD +QLQAI G PFR A Sbjct: 477 DVLVIDEAGMVGSRQLARVVMEAEARGAKLVLVGDHEQLQAIGAGSPFRAIVDHVGA--V 534 Query: 1125 IMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQE 1184 + EI RQ+ W + S+ +H Sbjct: 535 ELSEIRRQSEV----------------------------------WQRQASIAFATHRTG 560 Query: 1185 AKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLI-VTHLNEDRRVLNSM 1243 LA + D + A+V+DY + + I + H D R +N+ Sbjct: 561 DGLAIYADCGAVHFSESRD---EVRAALVQDYLEDLEQRSVGSRIALAHRRVDVRAINAD 617 Query: 1244 IHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKD 1303 I ++ G+L + + L + ++T+ I + Sbjct: 618 IRASLQQRGQLTRGEGEQGTLGRELV----------YQTNDG-----------IRSFAPG 656 Query: 1304 DGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWT 1363 D ++ L+ N R ++ + + V PD +++ + N Sbjct: 657 DRIVLLE----NNRDLNVKNGMLGTVQAVEPDALQIR-----------LDGAGQNN--AR 699 Query: 1364 VTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNR 1423 V ++ +S Q D YA T H +QGA+ A + +R Sbjct: 700 VVSIPVNS-------------------YQSFDHGYATTIHKSQGATVDRAFVMASRTMDR 740 Query: 1424 KLMAGFESAYVALSRMKQHVQVYTD-----NRQGWTDAINNAVQKGTAHDV 1469 L YVA++R + +V++Y + + + +++ + K T D Sbjct: 741 HLT------YVAMTRHRHNVKLYASRDELKDMKALSASMSRSGVKETTLDY 785 Score = 100 bits (249), Expect = 5e-19, Method: Composition-based stats. Identities = 114/812 (14%), Positives = 241/812 (29%), Gaps = 166/812 (20%) Query: 267 HVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAG 326 ++P M + G + R A A ++ +++ Q ++ Sbjct: 213 EIEPTEHMGVHASQMDRRGLQVSRTRMDA-----------KAAKRNAALIREKPEQVLSI 261 Query: 327 LSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIP-LDREKGLFTSGIH 385 L+ K F DV AR + ++ + A A + + + +L P + E +++ Sbjct: 262 LTGEKSVFDRHDV-ARALHRYIDDHQAFQNAFAAVMASPALVELRPEQNGELARYSTREM 320 Query: 386 VLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQD---------------- 429 + E ++ A + + + V A + A+ + Sbjct: 321 LEIEHAMAASADRMSQSPHHGVRRHHVDQALAFQNAAIKSMTASSLSLKVERGELRPVDR 380 Query: 430 -------------RPSLAIVSGQG--------GAAGQRERVAELVMMAREQGREVQIIAA 468 R ++A ++G AG+ +A QG V A Sbjct: 381 ERAIERSGLSDEQRLAVAHITGHAQIAAVIGFAGAGKSTMLAAARDAWERQGYRVHGAAL 440 Query: 469 DRRSQMNMKQDERLSGELITG--RRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAA 526 ++ +++ ++ + G +++D+ + ++ ++ A Sbjct: 441 AGKAAEGLEESSGIASRTLASWEYGWQAGKGQLGKGDVLVIDEAGMVGSRQLARVVMEAE 500 Query: 527 RHNVQVLITDSG---QRTGTGSALMAMKDAG----VNTYRWQGGE-QRPATII------- 571 ++++ Q G GS A+ D ++ R Q QR A+I Sbjct: 501 ARGAKLVLVGDHEQLQAIGAGSPFRAIVDHVGAVELSEIRRQSEVWQRQASIAFATHRTG 560 Query: 572 --------------SEPDRNVRYARLAGDFAASVKAGEESVAQVSGVR--EQAILTQAIR 615 SE VR A L D+ ++ R + + IR Sbjct: 561 DGLAIYADCGAVHFSESRDEVR-AALVQDYLEDLEQRSVGSRIALAHRRVDVRAINADIR 619 Query: 616 SELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVT 675 + L+ +G L E L + Y+ + + P DR+ Sbjct: 620 ASLQQRGQLTRGEGEQGTLGRELV----------YQTNDGIRSFAPG---------DRIV 660 Query: 676 AQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRL 735 ++ L G V+ D+ Sbjct: 661 LLENNRDLNVKNGMLGTVQAVEPDA----------------------------------- 685 Query: 736 QVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQM 795 + + + G + VS + ++G+ T S + + Sbjct: 686 ---------LQIRLDGAGQNNARVVSIPVNSYQSFDHGYATTIHKSQGATVDRAFVMASR 736 Query: 796 AMDNA-TLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAIS 854 MD T + R +V+LY+S DE + + L+ S + V E G + ++ Sbjct: 737 TMDRHLTYVAMTRHRHNVKLYASRDELKDMKALSASMSRSGVKETTLDYTGVFAARRGLA 796 Query: 855 HQKSALHTPAQQAIHLALPVVESKKL---------AFSMVDLLTEAKSFAAEGTGFTELG 905 L ++ A++ + + L AF + + A+ G E+ Sbjct: 797 ---EELGVHSEIAVNRSSERAAERPLARDSIIDGHAFPPATVQSSARVKGPLGEKGLEIP 853 Query: 906 GEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAE--KSILRHILEGKEAVMPLMERVPG 963 E A + L + + E S+ RH+ ++V + Sbjct: 854 TEKVAPLVPALLSHSRSIEDVALEKATPHLERAMEAVHSVGRHVYANPDSVAAKLITAII 913 Query: 964 ELMEKLTSGQRAATRMILETSDRFTVVQGYAG 995 ++ + E ++F ++G AG Sbjct: 914 RNDI----SRQELATAVAEYPEQFGALRGKAG 941 >UniRef50_UPI00005104AE conjugative relaxase domain protein, TrwC/TraI family n=1 Tax=Brevibacterium linens BL2 RepID=UPI00005104AE Length = 1183 Score = 225 bits (574), Expect = 1e-56, Method: Composition-based stats. Identities = 170/1017 (16%), Positives = 308/1017 (30%), Gaps = 201/1017 (19%) Query: 23 YYVL-GSMGERWAGRGAEQL------GLQ--GSVDKDVFTRLL-EGRLPDGAD------- 65 YY GS W G G L G+ +V ++ RLL +G P Sbjct: 30 YYTESGSPPGTWLGTGLASLDDGTGTGVDEGSTVTEEHLARLLGQGVHPVTGAKLGHAYP 89 Query: 66 ----------------------------LSRMQDGSNRHRP-----GYDLTFSAPKSVSM 92 + ++D +P G+DLTFS PKS+S Sbjct: 90 SLRPPRERIADRVAKLAPDMPAAQREVMIQDIRDEEAARKPKSAIAGFDLTFSPPKSLST 149 Query: 93 MAMLGG---DKRLIDAHNQAVDFAVRQVEA-LASTRVMTDGQSETVLTGNLVMALFNHDT 148 + + + L AH+ A+ V +E +ASTRV G + +TG ++ F+H Sbjct: 150 LWGVADAPMQELLAQAHHAAMRDTVAMLEERVASTRVGKGGIARMPITG-VIATAFDHYD 208 Query: 149 SRDQEPQLHTHAVVANVTQ-HNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQ 207 SR +PQLHTH VV+N Q +G+W++L S ++ K +A Y L + Sbjct: 209 SRAADPQLHTHLVVSNKVQGEDGKWRSLDSRRLHKA---------TVALSASYNAYLIDH 259 Query: 208 VEA-LGYETEVV----GKHGMWEMPGVPVE---AFSGRS------------------QTI 241 LG E V ++ WE+ G+P E FS RS + Sbjct: 260 TADLLGLTWEPVDRGKDRNTGWEITGIPAELIAEFSRRSTGSSGGVEGIEQAKNRLIRDY 319 Query: 242 REAVGEDASL----KSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQ 297 R+A G S + R A L+TR K+ A+W + Sbjct: 320 RDAHGHAPSPDTIARLRQQATLETRPEKELHSLAELTADWRERATRLLGTDATTWAQDVL 379 Query: 298 RADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERA 357 V+ + +++R+ +T ++ A + L Sbjct: 380 TRTPDASRLRAEDLGAQQVEDLAAVVVMTVADRRSTWTRWNLHAEAMRQLMSTRFTTPAE 439 Query: 358 RAGI-DEAISREQLIPLD-----------------------REKGLFTSGIHVLDELSVR 393 R + D+ ++ + L ++ ++S + E + Sbjct: 440 RTAVLDQIVAGAEAQSLRLTPEYDRAVPGHYVDGSGNRFQSSDQVAYSSQEILDAEHRLL 499 Query: 394 ALSRDI-------MKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQR 446 + D R + V + AV+ +A SL ++ G G AG+ Sbjct: 500 KHADDTSAPRLPSRMVARHVSRKIQGVRLADDQAAAVTRIACSGRSLDLLVGPAG-AGKT 558 Query: 447 ERVAEL--VMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGM--AFTPG 502 + L AR V +A + + + + E E F PG Sbjct: 559 TALRGLHRAWTARHGQGSVIGLAPSAAAAEVLGESLGVQAENTAKFLYEHERGRWDFQPG 618 Query: 503 STVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGT---GSALMAM--KDAGVNT 557 +++D+ + + A + ++++ + + G A + G T Sbjct: 619 QLILLDEASLAGTLTLDRIAEHAGQAGAKLVLVGDPAQLSSVETGGAFGMLVRHRPGPPT 678 Query: 558 YRWQGGEQRPATIISEPDRNVRYARLAGDF----------------------AASVKAGE 595 + D + D+ G Sbjct: 679 LTDARRFVHEWEKTASLDLRRGKTAVLEDYENHGRLVDGSIERMLDAAYTAWQQDRDEGL 738 Query: 596 ESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMV 655 ++ A L R +L G + + + + + +V Sbjct: 739 ATLMIAGNAEMVAELNTRAREDLIADGRVERDGIGLHDGTTAGV------------GDLV 786 Query: 656 MEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADG 715 + + N S R + S+ R G V R+ D G Sbjct: 787 VTRRNDRQLSLGRSWVK--NGDRWSVARRLENGALAVRRLGPGDQP------------AG 832 Query: 716 ERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWV 775 L + + V G V ++ + D + +L +V Sbjct: 833 AELVLPAEYVAEDVELGYATTVHRAQGASV---------DTVHALVDPETASRELF--YV 881 Query: 776 ETPGHSVSDSATVFASVTQ-MAMDNATLNGLARSGRDVRLYSSLDETRTA-----EKLAR 829 +++A + + T L R + R+ + D +A ++ R Sbjct: 882 AMTRGKQNNTAYIIQPDPHEIEPHLETAEPLTRIEQLHRVLARSDADLSATETLKHEVDR 941 Query: 830 HPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVD 886 H S + + A E +E + ++ A A P E + A + + Sbjct: 942 HASLATLVHEYDVLAREAQVERSAAYLDVAPFPEAVADDVFTSPHYEQLEAAITRHE 998 Score = 129 bits (323), Expect = 1e-27, Method: Composition-based stats. Identities = 87/505 (17%), Positives = 158/505 (31%), Gaps = 85/505 (16%) Query: 875 VESKKLAFSMVDLLTEAKS--FAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYG----- 927 V ++ ++ +L EA + T E ++ + + + + Y Sbjct: 409 VADRRSTWTRWNLHAEAMRQLMSTRFTTPAERTAVLDQIVAGAEAQSLRLTPEYDRAVPG 468 Query: 928 --------------TGLLVSRASYEAEKSILRHILEGKEAVMP--LMERVPGELME--KL 969 S+ +AE +L+H + +P ++ R ++ +L Sbjct: 469 HYVDGSGNRFQSSDQVAYSSQEILDAEHRLLKHADDTSAPRLPSRMVARHVSRKIQGVRL 528 Query: 970 TSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRA 1029 Q AA I + ++ G AG GKTT R + A + V+GL P+ A Sbjct: 529 ADDQAAAVTRIACSGRSLDLLVGPAGAGKTTALRGLHRAW-TARHGQG-SVIGLAPSAAA 586 Query: 1030 VGEMRSA-GVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIA 1088 + + GV A+ A FL++ + G L LLDE+S+ G + R Sbjct: 587 AEVLGESLGVQAENTAKFLYEHE----RGRWDFQPGQLILLDEASLAGTLTLDRIAEHAG 642 Query: 1089 AGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDV 1148 G + V GD QL ++ G F + + + R E + Sbjct: 643 QAGAKLVLVGDPAQLSSVETGGAFGMLVRHRPGP-PTLTDARRFVHEWEKTASL------ 695 Query: 1149 ERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTL 1208 + + A L + + L + + Sbjct: 696 -----------------------------DLRRGKTAVLEDYENHGRLVDGSIERMLDAA 726 Query: 1209 YEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGEL--------GKEQVM 1260 Y A +D + TL++ E LN+ + G + Sbjct: 727 YTAWQQD-----RDEGLATLMIAGNAEMVAELNTRAREDLIADGRVERDGIGLHDGTTAG 781 Query: 1261 VPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLIS 1320 V L D +L +W + D + + + + + + D L+ Sbjct: 782 VGDLVVTRRNDRQLSLGRSWVKNGDRWSVARRLENGALAVRR----LGPGDQPAGAELVL 837 Query: 1321 PREAVAEGVTLYTPDTIRVGTGDRM 1345 P E VAE V L T+ G + Sbjct: 838 PAEYVAEDVELGYATTVHRAQGASV 862 Score = 66.8 bits (161), Expect = 7e-09, Method: Composition-based stats. Identities = 63/326 (19%), Positives = 108/326 (33%), Gaps = 51/326 (15%) Query: 1266 TANIRDGELRRLSTWETHR----DALVLVDNVYHRIAGISKDDGLITL-----------Q 1310 + ++R G+ L +E H ++ + + + +D+GL TL Sbjct: 694 SLDLRRGKTAVLEDYENHGRLVDGSIERMLDAAYTAWQQDRDEGLATLMIAGNAEMVAEL 753 Query: 1311 DAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGY-----VANSVWTVT 1365 + LI+ +G+ L+ T G GD + ++DR+ W+V Sbjct: 754 NTRAREDLIADGRVERDGIGLHDGTTA--GVGDLVVTRRNDRQLSLGRSWVKNGDRWSVA 811 Query: 1366 AVSGDSV----TLSDGQQTR--EIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGT 1419 + L G Q E+ E + ++L YA T H AQGAS AL Sbjct: 812 RRLENGALAVRRLGPGDQPAGAELVLPAEYVAEDVELGYATTVHRAQGASVDTVHALVDP 871 Query: 1420 EGNRKLMAGFESAYVALSRMKQHVQVYT------------------DNRQGWTDAINNAV 1461 E A E YVA++R KQ+ Y + + + Sbjct: 872 E-----TASRELFYVAMTRGKQNNTAYIIQPDPHEIEPHLETAEPLTRIEQLHRVLARSD 926 Query: 1462 QKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPARFIAPGRK 1521 +A + + + DR A + R+ R+ ++ A + Sbjct: 927 ADLSATETLKHEVDRHASLATLVHEYDVLAREAQVERSAAYLDVAPFPEAVADDVFTSPH 986 Query: 1522 YPQPYVALPAFDRNGKSAGIWLNPLT 1547 Y Q A+ + G S L L Sbjct: 987 YEQLEAAITRHEATGHSPTRVLTALA 1012 >UniRef50_B3GW66 TraA Protein n=3 Tax=Corynebacterium RepID=B3GW66_9CORY Length = 1492 Score = 223 bits (569), Expect = 4e-56, Method: Composition-based stats. Identities = 132/700 (18%), Positives = 229/700 (32%), Gaps = 123/700 (17%) Query: 39 EQLGLQGSVDKDVFTRLLEGRLPDGAD-----LSRMQDGSNRHRPGYDLTFSAPKSVSMM 93 E+ L ++ ++ F G P ++ ++D + G+DLTFS KSVS++ Sbjct: 132 ERAELVQNIGREFFIE-EHGVEPQSGREIVNWVNGLKDNVRQSVSGFDLTFSPAKSVSVV 190 Query: 94 AMLGGD---KRLIDAHNQAVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSR 150 L + +R+ H+QAV A+ E E V T ++ + F H +R Sbjct: 191 WALSDEETARRIEKLHHQAVKEAMAWAEDNVFFTRSGKQGREQVKTKGVIASEFKHYDTR 250 Query: 151 DQEPQLHTHAVVANVTQ-HNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVE 209 +P LH+H +V+N Q +G W +L S + K A Y L + Sbjct: 251 AGDPDLHSHVLVSNKVQAEDGRWLSLDSKALHKQ---------AQAISHRYDSILNTLLS 301 Query: 210 -ALGYETEVVG----KHGMWEMPGVP---VEAFSGRSQT--------IREAVGEDASL-- 251 +GY K WE+ GV +E+FS R + + E V + Sbjct: 302 NDMGYSFTARDHGVNKEPTWEIEGVSESLMESFSKRRRGAEPVYKRLVDEFVAARGTTPN 361 Query: 252 -----KSRDVAALDTRKSKQHVDP-EIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLT 305 + A L+TR +K+ + A W + A Q + Sbjct: 362 SVEVGRLWQQAILETRDAKREPESLSELRAGWKNEVSARDNGQEELASIA-QLSANSGHD 420 Query: 306 PGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGV----IERARAGI 361 P + + +A ++ R+ F + V G L + A + Sbjct: 421 ERPLFDAHEHLSGLIDDVLATVTRRRSYFRTSHVATAAGGKLQGYRFASLAERDLIHATV 480 Query: 362 DEAISREQLIPLDR----------------------EKGLFTSGIHVLDE--------LS 391 EAI R++ I L+ + LFT+ + E Sbjct: 481 VEAIVRDKAIALNDFDVLELPESLKNTAGQARDTRADSELFTTQDILDTEDKALAALNEP 540 Query: 392 VRALSRDIMKQNRVTVH-PEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVA 450 V A + + H E AG L A G G G+ + Sbjct: 541 VAAFAPSRAIDEALDGHEREAGFRLNAGQESMARYLLTCGTLAATGVGPAG-TGKTASMR 599 Query: 451 ELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELI------------TGRRQLLEGMA 498 + + +GR V +A ++ + +D I T L+ + Sbjct: 600 LVANVWANEGRNVIGLAPSAQAADVLSEDLGFDAFTIDKLTYTWRGNHPTKPGHSLKDLP 659 Query: 499 FTPGS--TVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGT---GSALMAMKDA 553 + + +IVD+ S +LL+ A V ++ G G AM +A Sbjct: 660 VSINAGDMIIVDEAGMASTPNIGSLLEIAEEAGAVVRFIGDHKQLGAVENGGLFGAMVNA 719 Query: 554 GVNTYRWQG---------GEQRPATIISEPD-----------------RNVRYARLAGDF 587 T + + + E D R+ + A D+ Sbjct: 720 AERTDNQLSEVVRFGGDREQSATSLRLREGDRSTFDFYSERGWVNGGARSDMLDKAAADY 779 Query: 588 AASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLP 627 A + +G+ S+ + R+ A L + IR+ V+ Sbjct: 780 LADISSGKTSLLIAATNRDVAELNETIRAHYIAHSVVDTT 819 Score = 146 bits (369), Expect = 6e-33, Method: Composition-based stats. Identities = 81/496 (16%), Positives = 149/496 (30%), Gaps = 79/496 (15%) Query: 930 LLVSRASYEAEKSILRHILEGKEAVMP------LMERVPGELMEKLTSGQRAATRMILET 983 L ++ + E L + E A P ++ E +L +GQ + R +L Sbjct: 520 LFTTQDILDTEDKALAALNEPVAAFAPSRAIDEALDGHEREAGFRLNAGQESMARYLLTC 579 Query: 984 SDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA-GVDAQT 1042 G AG GKT R V + +E V+GL P+ +A + G DA T Sbjct: 580 GTLAATGVGPAGTGKTASMRLVANV----WANEGRNVIGLAPSAQAADVLSEDLGFDAFT 635 Query: 1043 LASFLHDTQLQQRSGETPDFSN--------TLFLLDESSMVGNTDMARAYALIAAGGGRA 1094 + + + + + + ++DE+ M ++ + G Sbjct: 636 IDKLTYTWRGNHPTKPGHSLKDLPVSINAGDMIIVDEAGMASTPNIGSLLEIAEEAGAVV 695 Query: 1095 VASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSG 1154 GD QL A+ G F + + E+VR + ++ SL R+ +R+ Sbjct: 696 RFIGDHKQLGAVENGGLFGAMVNAAERTDNQLSEVVRFGGDREQSATSLRLREGDRS--- 752 Query: 1155 LESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVR 1214 +G + + Sbjct: 753 -----------------------------------TFDFYSERGWVNGGARSDMLDKAAA 777 Query: 1215 DYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREK--------AGELGKEQVMV---PV 1263 DY + +L++ N D LN I +L + + + Sbjct: 778 DYLADISSGK-TSLLIAATNRDVAELNETIRAHYIAHSVVDTTVEAQLSRGEKAGLGDTI 836 Query: 1264 LNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPRE 1323 L N + ++ + + + GI ++G IT ++ L P + Sbjct: 837 LARKNQTFYDDETATS-------TRINNGTLMTVTGI-AENGSITARNQTTGDELCLPAD 888 Query: 1324 AVAEGVTLYTPDTIRVGTGDRMRFTKS--DRERGYVANSVWTVTAVSGDSVTLSDGQQTR 1381 V + V L T+ G + T++ D V + + Q Sbjct: 889 YVHDNVQLGYAATVHRAQGSTVDCTRAVIDHHVDRAGLYVALTRGKIANHIYAVTEHQLD 948 Query: 1382 EIRPGQEQAEQHIDLA 1397 E+ Q ID A Sbjct: 949 ELAEDGHYHYQGIDHA 964 Score = 57.9 bits (138), Expect = 3e-06, Method: Composition-based stats. Identities = 81/452 (17%), Positives = 152/452 (33%), Gaps = 60/452 (13%) Query: 1342 GDRMRFTKS----DRERG----YVANSVWTVTAVSGD-SVTLSDGQQTREIRPGQEQAEQ 1392 GD + K+ D E ++ TVT ++ + S+T + E+ + Sbjct: 833 GDTILARKNQTFYDDETATSTRINNGTLMTVTGIAENGSITARNQTTGDELCLPADYVHD 892 Query: 1393 HIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQG 1452 ++ L YA T H AQG++ A+ +R + YVAL+R K +Y Sbjct: 893 NVQLGYAATVHRAQGSTVDCTRAVIDHHVDRAGL------YVALTRGKIANHIYAVTEHQ 946 Query: 1453 WTDAINNA-------VQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAG 1505 + + +A DVF+ R+ A + + + ++ Sbjct: 947 LDELAEDGHYHYQGIDHAPSARDVFDKAISRDTTPKAAREVIAEVVDEQTSPDRMMGLWL 1006 Query: 1506 LAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGEGRVKG 1565 + ++ FI P LP G + T D G ++ Sbjct: 1007 MGKDEATNDFIDA--YLPDWIDTLP---------GDLSRKIETSDDGTEPIRHGWVKLID 1055 Query: 1566 SG-------DAQFVALQGSRNGESLLADNMQDGVRI----ARDN--PDSGVV-VRIAGEG 1611 +G DA + + + L+ + + +R+ R+ P SG + + Sbjct: 1056 AGIDPRTVMDAATRDIDNAHDPARLIRYRLDEQLRLRDTGKRNQLPPVSGQTDIELDTWL 1115 Query: 1612 RPWNP------GAITGGRVWGDIPDNSVQPGAGNGEPVTAEVLAQRQAEEAIRRETERRA 1665 R NP +TG + + SV E L ++A R ++ A Sbjct: 1116 RTHNPYDRAETTRLTGKEHNLNRLNQSVLVEHARFASSKVESLTWQEASITTRLHEDKDA 1175 Query: 1666 DEIVRKMAENKPDLPDGKT---EQAVREIAG---QERDRAAITEREAALPEGVLREPQRV 1719 + + L G+ EQA+ + + +E A E + L E R P Sbjct: 1176 AANEVQADYQQVVLDAGRIRAYEQAMADHSAALREEETARADIEHQRLLAEDYTR-PVAE 1234 Query: 1720 REAVREIARENLLQERLQQMERDMVRDLQKEK 1751 R ++ Q+R+ + + + Q+ K Sbjct: 1235 RAYDHDVDGYGTYQQRINHAHKRLEQAQQRRK 1266 >UniRef50_C4WLD2 Ti-type conjugative transfer relaxase TraA n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WLD2_9RHIZ Length = 1322 Score = 223 bits (568), Expect = 5e-56, Method: Composition-based stats. Identities = 105/610 (17%), Positives = 197/610 (32%), Gaps = 127/610 (20%) Query: 872 LPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIK----------------RG 915 L + +++ F D+ + + F + + A +G Sbjct: 278 LRQLGNERSTFDEKDIARVIHRYVDDPADFANIRARLMASPDLVLLKPQQSGALTDPIKG 337 Query: 916 DLLYVDVAKGYGTGLLVSRASYEAEKSILRHIL------------EGKEAVMPLMERVPG 963 + + + +R E +++R G+ A + +E Sbjct: 338 RVNGRVKGEATEPAIFTTRKILRTEHNMMRSADILSGRKGFGISDAGRAAALRFVEEDNP 397 Query: 964 ELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGL 1023 +L Q A + + V G AG GK+T +++A + ES RV+G Sbjct: 398 LKPFRLDLEQIEAIQHV-TGDSGIAAVVGLAGTGKST----LLAAARLAWESGHHRVLGA 452 Query: 1024 GPTHRAVGEMRSAG-VDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMAR 1082 + +A + + + ++TLA++ H +G + ++DE+ MV + MAR Sbjct: 453 ALSGKAAEGLEESSAIRSRTLAAWEHA----WNNGRDQLMRGDILVIDEAGMVSSLQMAR 508 Query: 1083 AYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYS 1142 + G + V GD QLQ I G FR R A + + RQ E Sbjct: 509 VLDAVEKAGAKVVLVGDAMQLQPIGAGAAFRAISER--ISSAELAGVRRQQDEWARDASK 566 Query: 1143 LINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFP 1202 L R A + + + V + V +++ ++ + +Q ++ Sbjct: 567 LFARGDTAAGLEIYARRGHLVEAETRDALIGRLVRDWTDARRKLITPSQTGRGVQPGTGI 626 Query: 1203 DVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVP 1262 P + + L++ H N D LN + V + G L + Sbjct: 627 AAPNGGGQL-----------PGDALLVLAHTNRDVHRLNEALRKVMREEGALDGARRF-- 673 Query: 1263 VLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPR 1322 + +R + D +I L++A R + PR Sbjct: 674 ------RTERGMREFAA-----------------------GDRIIFLENA----RFLEPR 700 Query: 1323 EAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGD------SVTLSD 1376 G+R + TV + SV L Sbjct: 701 -----------------ARGNR--------PQYVRNGMFGTVVSTGNAFRAPLLSVRLDS 735 Query: 1377 GQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVAL 1436 G + E + ++ID YA+T H +QGA+ + L +R L V++ Sbjct: 736 GNEIVL----SEDSYRNIDHGYAVTIHKSQGATVDRTLVLASGMMDRHLTC------VSM 785 Query: 1437 SRMKQHVQVY 1446 +R + +Y Sbjct: 786 TRHRHRADLY 795 Score = 83.7 bits (205), Expect = 6e-14, Method: Composition-based stats. Identities = 80/643 (12%), Positives = 183/643 (28%), Gaps = 98/643 (15%) Query: 244 AVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRD------AADQ 297 G ++K+ +A T + + E G D A R A + Sbjct: 190 WAGNRETMKAWKIAWAQTASRYLALAGRDIRLDGRSHA-EQGLDGIAQRHLGPGKSAMMR 248 Query: 298 RADLRTLTPGPASQDGPDVQQAVTQ---AIAGLSERKVQFTYTDVLARTVGILPPENGVI 354 + P ++ + + + L + F D+ AR + + Sbjct: 249 KGVEMYFAPADLARRRKMTARLLADPEPLLRQLGNERSTFDEKDI-ARVIHRYVDDPADF 307 Query: 355 ERARAGIDEAISREQLIPL-DREKGLFT---------------SGIHVLDELSVRALSRD 398 RA ++ L+ L ++ G T + + + + Sbjct: 308 ANIRA---RLMASPDLVLLKPQQSGALTDPIKGRVNGRVKGEATEPAIFTTRKILRTEHN 364 Query: 399 IMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRP------------SLAIVSGQGGAA--- 443 +M+ + + AG + A+ + +D P ++ V+G G A Sbjct: 365 MMRSADILSGRKGFGISDAGRAAALRFVEEDNPLKPFRLDLEQIEAIQHVTGDSGIAAVV 424 Query: 444 -----GQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQL--LEG 496 G+ +A + V A ++ +++ + + Sbjct: 425 GLAGTGKSTLLAAARLAWESGHHRVLGAALSGKAAEGLEESSAIRSRTLAAWEHAWNNGR 484 Query: 497 MAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSG---QRTGTGSALMAMKDA 553 G +++D+ +S + +LD + +V++ Q G G+A A+ + Sbjct: 485 DQLMRGDILVIDEAGMVSSLQMARVLDAVEKAGAKVVLVGDAMQLQPIGAGAAFRAISE- 543 Query: 554 GVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQA 613 +++ G ++ A D + G+ + R ++ Sbjct: 544 RISSAELAGVRRQQDEW-------------ARDASKLFARGDTAAGLEIYARRGHLVEAE 590 Query: 614 IRSELKTQGVLGLPEVTMTALSPVWLDSRSR-----YLRDMYRPGMVMEQWNPETRSHDR 668 R L + L W D+R + +PG + N + Sbjct: 591 TRDAL------------IGRLVRDWTDARRKLITPSQTGRGVQPGTGIAAPNGGGQLPGD 638 Query: 669 YVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGK----- 723 ++ L +A + + + A G+R+ Sbjct: 639 ALLVLAHTNRDVHRLNEALRKVMREEGALDGARRFRTERGMREFAAGDRIIFLENARFLE 698 Query: 724 -----IPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETP 778 V G V S + +A + + + S + +++G+ T Sbjct: 699 PRARGNRPQYVRNGMFGTVVS-TGNAFRAPLLSVRLDSGNEIVLSEDSYRNIDHGYAVTI 757 Query: 779 GHSVSDSA-TVFASVTQMAMDNATLNGLARSGRDVRLYSSLDE 820 S + + M + T + R LY++ ++ Sbjct: 758 HKSQGATVDRTLVLASGMMDRHLTCVSMTRHRHRADLYAARED 800 >UniRef50_C7JJ99 Conjugal transfer protein TraA n=10 Tax=Acetobacteraceae RepID=C7JJ99_ACEP3 Length = 1028 Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats. Identities = 166/890 (18%), Positives = 284/890 (31%), Gaps = 152/890 (17%) Query: 869 HLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGT 928 H+AL + ++ F+ D+ F T E + +++ L G+G Sbjct: 243 HVALEALTRQQSTFTRQDMA----RFVDRQTVDAEQFTAVMVRVEACPELVALGKDGHGR 298 Query: 929 GLLVSRASYEAEKSILRH---ILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSD 985 +RA E+ + + + + +PL R L Q A + ++ D Sbjct: 299 ERFSTRAMIGVEQRLEEASLAMGQSQGHAVPLAVRRAAMQHSGLGEEQALAVGEVTKSRD 358 Query: 986 RFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMR-SAGVDAQTLA 1044 +VV GYAG GK+T +A E RV G + A + +G++++TLA Sbjct: 359 -LSVVVGYAGTGKSTMLGVARAA----WEEAGYRVRGAALSGIAAEGLEAGSGIESRTLA 413 Query: 1045 SFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQ 1104 S + G + ++DE+ MVG+ M R ++ G + V GD +QLQ Sbjct: 414 SL----ERAWERGFDLLERGDVLVVDEAGMVGSRQMERVLSVAREAGAKVVLVGDPEQLQ 469 Query: 1105 AIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVY-SLINRDVERALSGLESVKPSQV 1163 AI G FR R + + + RQ ++A L E+AL E+ + Sbjct: 470 AIEAGGAFRAVAERVGS--VEITTVRRQREGWQQAATKELATGRTEQALGRYEAAGLVRG 527 Query: 1164 PRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEA 1223 + + R Sbjct: 528 HDT-------------------------------------LEEARAGVVAGWEEARQAAP 550 Query: 1224 REQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETH 1283 E +++ H D R LN ++R AGELG + V+VP + + Sbjct: 551 EESQIMLAHRRVDVRALNEAAREIRRDAGELG-DDVLVPTAQGERV----------FANG 599 Query: 1284 RDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGD 1343 L ++ R G+ L T++ G+ GD Sbjct: 600 ERVYFLRND---RELGVKNGT-LGTVRSIVGSAE-----------------------AGD 632 Query: 1344 RMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAH 1403 + D G V +V+ D+ +D YA T H Sbjct: 633 LAMSVQLDGPGGAGTGRVVSVSVAEYDA----------------------LDHGYAATIH 670 Query: 1404 GAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVY-----TDNRQGWTDAIN 1458 +QG + A L +R AYVALSR ++ V V+ +R G ++ Sbjct: 671 KSQGVTVDRAHVLATGSMDRH------GAYVALSRHRESVSVHWGRDDVGDRDGLVRRLS 724 Query: 1459 NAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPARFIAP 1518 K T D + DR+ A R ++ R + + Sbjct: 725 CERLKDTTLDYPHVR-DRDTGFARRR-GLHVPESEIVVEREKAASGPRQDRQAEGVPMPD 782 Query: 1519 GRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGEGRVKGSGDAQFVALQGSR 1578 Q D + + D GL +G+G +A G R Sbjct: 783 PASAQQKRGMFDGLDLSVRPGRCTTEK---DVSAGLDAGAGKGESGIEREAPVSPFAGLR 839 Query: 1579 NGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPGAITGGRVWGDIPDNSVQPGAG 1638 R+ R+ +G+ + G R W D V+ Sbjct: 840 LP------------RVQREQVPAGLDGFVPGSDPLHQAVE-RYARAWVDAER-MVRQELP 885 Query: 1639 NGEPVTAEVLAQRQAEEAIRRETERRADEIVRKMAENKPDL----PDGKTEQAVREIAGQ 1694 E +L + E IRR E ++ E + L + + V + + Sbjct: 886 VLEHQKKALLEAGRDLERIRRGGEADLRAALKHQPEIRQALYGLEGPARARKLVEGLEHE 945 Query: 1695 ERDRAAITEREAA-LPEGVLREPQRVREAVREIARENLLQERLQQMERDM 1743 +R R R A + ++ A +E+ R+ L+ L++ R++ Sbjct: 946 DRVRKRPDLRAARFVKTWDGLSREQQGVAFKELKRDAQLESILREKSREL 995 Score = 91.8 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 86/631 (13%), Positives = 190/631 (30%), Gaps = 77/631 (12%) Query: 259 LDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQ 318 LD R + + E + G + A++ AD + A ++G + Sbjct: 185 LDVRIDHRSFAAQGIDLEPQNKIGPAGMRREERGEDAERVADHLEI----ARRNGERLLA 240 Query: 319 AVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDRE-- 376 A+ L+ ++ FT D +AR V + ++ +L+ L ++ Sbjct: 241 EPHVALEALTRQQSTFTRQD-MARFVDRQTVDAEQFTAVMVRVEAC---PELVALGKDGH 296 Query: 377 -KGLFTSGIHV----LDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRP 431 + F++ + E + A+ + + V G A++V + Sbjct: 297 GRERFSTRAMIGVEQRLEEASLAMGQSQGHAVPLAVRRAAMQHSGLGEEQALAVGEVTKS 356 Query: 432 SLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRR 491 V G+ + E G V+ A + ++ + + Sbjct: 357 RDLSVVVGYAGTGKSTMLGVARAAWEEAGYRVRGAALSGIAAEGLEAGSGIESRTLASLE 416 Query: 492 QLLEG--MAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSG---QRTGTGSA 546 + E G ++VD+ + ++ +L A +V++ Q G A Sbjct: 417 RAWERGFDLLERGDVLVVDEAGMVGSRQMERVLSVAREAGAKVVLVGDPEQLQAIEAGGA 476 Query: 547 LMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVRE 606 A+ + + QR + + +++ R Sbjct: 477 FRAVAERVGSVEITTVRRQREGW------------------------QQAATKELATGRT 512 Query: 607 QAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSH 666 + L + + G++ + A + V +++ + R+ Sbjct: 513 EQALGRY-----EAAGLVRGHDTLEEARAGVVAGWEEARQAAPEESQIMLAHRRVDVRAL 567 Query: 667 DRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPG 726 + + + + L G+ +V + + ++ +GER+ Sbjct: 568 NEAARE-IRRDAGEL------GDDVLVPTAQGERVFA----------NGERVYFLRNDRE 610 Query: 727 LRVSGGDRLQVASVSED------AMTVVVPGRAEPAT---LPVSDSPFTALKLENGWVET 777 L V G V S+ AM+V + G T + VS + + AL Sbjct: 611 LGVKNGTLGTVRSIVGSAEAGDLAMSVQLDGPGGAGTGRVVSVSVAEYDALDHGYAATIH 670 Query: 778 PGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVS 837 V+ + M A L+R V ++ D+ + L R S + Sbjct: 671 KSQGVTVDRAHVLATGSMDRHGA-YVALSRHRESVSVHWGRDDVGDRDGLVRRLSCERLK 729 Query: 838 EQIKTRAGETSLETAISHQKSALHTPAQQAI 868 + +T + + LH P + + Sbjct: 730 DTTLDYPHVRDRDTGFAR-RRGLHVPESEIV 759 >UniRef50_A1SIX0 DNA primase catalytic core, N-terminal domain n=3 Tax=Nocardioides sp. JS614 RepID=A1SIX0_NOCSJ Length = 1976 Score = 220 bits (560), Expect = 4e-55, Method: Composition-based stats. Identities = 143/878 (16%), Positives = 263/878 (29%), Gaps = 159/878 (18%) Query: 28 SMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRLPDGAD-----LSRMQDGSNRHRPGYDL 82 + W A++ ++ V + F R GR P A +++ GYDL Sbjct: 140 GLPGDWPVPAADRAKVRTEVGTE-FFRAEHGREPADARELAAAIAKHSRPKTNAVAGYDL 198 Query: 83 TFSAPKSVSMMAMLGGDKR---LIDAHNQAVDFAVRQVEALASTRVMTDGQSETVLTGNL 139 TFS KSVS++ + K + AH A+ A+ +E+ A V L Sbjct: 199 TFSPVKSVSVLWAISDPKTAAVIERAHQAAIKDALGFIESKALFTRRGTNGVRQVDVRGL 258 Query: 140 VMALFNHDTSRDQEPQLHTHAVVANVTQH-NGEWKTLSSDKVGKTGFIENVYANQIAFGR 198 V F H SR +P LHTH VAN Q +G+W + + K ++ Sbjct: 259 VATAFTHRDSRAGDPDLHTHVAVANKVQTLDGKWLAIDGRPLHKAV---------VSASE 309 Query: 199 LYREKLKEQV-EALGYETEVV-----GKHGMWEMPGVPVEA---FSGRSQTIREAVGEDA 249 Y L+ + +ALG E K + E+ GV E FS R ++ + A Sbjct: 310 TYNTALERHLVDALGVRFEERPNEDARKRPVREIVGVDPELNRRFSKRRASVEDRRKVLA 369 Query: 250 ---------------SLKSRDVAALDTRKSK-QHVDPEIKMAEWMQTLKETGFDIRAYRD 293 +++ A L+TR++K + + W + E + Sbjct: 370 AAFQATHGRPPTPVETIQLSQQATLETREAKHEPRSLAEQRETWSREAIEVLGTPQRVEH 429 Query: 294 AADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGV 353 + + D + + +A + + + + V A + N Sbjct: 430 MVHGALNPKGAARS--LADSAWFAKTTDRIVATMEGARSTWQFWHVYAEAQRQVRGANVP 487 Query: 354 IERARAGID------------------EAISRE-QLIPLDREKGLFTSGIHVLDELSVRA 394 + +D +AIS +L D SG + V A Sbjct: 488 TNQVPHVVDLLVSEVLDGRSVSMARAWDAISEPVELRRADGTSVYTQSGAELFTSGKVLA 547 Query: 395 LSRDIMKQNR---------------VTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQ 439 + +++ + + AG + V +A L + Sbjct: 548 AEQRLVEVAGRHDGYAVTTDSVDLALLESTANGITLNAGQATLVREMATSSARLQLAIAP 607 Query: 440 GGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEG--- 496 G +G+ + L + G + +A + ++ + + LE Sbjct: 608 AG-SGKTTAMRALASAWADGGGTIIGLAPSAAAADALRSQIDTQTDTLAKLTHSLEQARE 666 Query: 497 ---------MAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSAL 547 + V++D+ + V + Q+ A Sbjct: 667 SGAAMPAWVARIDSSTLVVIDEAGMADTLSLDAAVSYILERGGSVRLIGDDQQLSAIGAG 726 Query: 548 MAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQ 607 ++D R G + ++ D A LA ++ G+ R++ Sbjct: 727 GVLRD-----IRATHGALQLTELVRFKDPAEGAASLA------LREGKPESLGFYLDRDR 775 Query: 608 ------AILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNP 661 A +T+ + + + GL + L+P ++ + N Sbjct: 776 VHVGDLATMTEDVFAAWQADRAAGLDSIM---LAP---------------TRDLVSELNQ 817 Query: 662 ETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVT 721 + R+H I+ + R A G + GE + Sbjct: 818 QARAHRLEGIEPADVAASGPVRRLADGN---------------------EASIGELIITR 856 Query: 722 GKIPGLR------VSGGDRLQVASVSEDA-MTVVVPGRAEPATLPVSDSPFTALKLENGW 774 LR V GDR V + +D +TV LP + A E G+ Sbjct: 857 ENDRRLRTSATDWVKNGDRWNVLEIHDDGDLTVQHTQHGRTVRLPAD---YVARSSELGY 913 Query: 775 VETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDV 812 T + +A + + L + G Sbjct: 914 ACTVHTAQGVTADTMHGLATGSESRQQLYTMMTRGVHA 951 Score = 107 bits (266), Expect = 5e-21, Method: Composition-based stats. Identities = 73/366 (19%), Positives = 121/366 (33%), Gaps = 35/366 (9%) Query: 901 FTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKE-AVMPLME 959 + + + + G +Y G L S AE+ ++ + G+ + Sbjct: 514 WDAISEPVELRRADGTSVYTQS----GAELFTSGKVLAAEQRLV--EVAGRHDGYAVTTD 567 Query: 960 RVPGELME------KLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLP 1013 V L+E L +GQ R + +S R + AG GKTT RA+ SA Sbjct: 568 SVDLALLESTANGITLNAGQATLVREMATSSARLQLAIAPAGSGKTTAMRALASA----W 623 Query: 1014 ESERPRVVGLGPTHRAVGEMRSA-GVDAQTLASFLHDTQLQQRSGET------PDFSNTL 1066 ++GL P+ A +RS TLA H + + SG S+TL Sbjct: 624 ADGGGTIIGLAPSAAAADALRSQIDTQTDTLAKLTHSLEQARESGAAMPAWVARIDSSTL 683 Query: 1067 FLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIM 1126 ++DE+ M + A + I GG GD QL AI G R + A + Sbjct: 684 VVIDEAGMADTLSLDAAVSYILERGGSVRLIGDDQQLSAIGAGGVLRDIRATHGA--LQL 741 Query: 1127 KEIVRQTPELREAVYSLINRDVERAL------SGLESVKPSQVPRQEGAWAPEHSVTEFS 1180 E+VR A + +L + + + A Sbjct: 742 TELVRFKDPAEGAASLALREGKPESLGFYLDRDRVHVGDLATMTEDVFAAWQADRAAGLD 801 Query: 1181 HSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQT---LIVTHLNEDR 1237 A + + + A + + R + E + LI+T N+ R Sbjct: 802 SIMLAPTRDLVSELNQQARAHRLEGIEPADVAASGPVRRLADGNEASIGELIITRENDRR 861 Query: 1238 RVLNSM 1243 ++ Sbjct: 862 LRTSAT 867 Score = 60.3 bits (144), Expect = 6e-07, Method: Composition-based stats. Identities = 80/453 (17%), Positives = 136/453 (30%), Gaps = 64/453 (14%) Query: 1338 RVGTGDRMRFTKSDRERG------YVANSVWTVTAVSGDS-VTLSDGQQTREIRPGQEQA 1390 G+ + ++DR W V + D +T+ Q R +R + Sbjct: 846 EASIGELIITRENDRRLRTSATDWVKNGDRWNVLEIHDDGDLTVQHTQHGRTVRLPADYV 905 Query: 1391 EQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNR 1450 + +L YA T H AQG + L +R+ + Y ++R VY Sbjct: 906 ARSSELGYACTVHTAQGVTADTMHGLATGSESRQQL------YTMMTRGVHANHVY---- 955 Query: 1451 QGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGD 1510 + + + H V P R + + L S + ++LR+ D Sbjct: 956 ---LEVVGDGDP----HSVIHPTLVRPLTPTDILESMLARDNMQRSATSLLREQ----AD 1004 Query: 1511 SPARFIAPGRKYPQP-YVALPAF--------DRNGKSAGIWLNPLTTDDGNGLRGFSGEG 1561 R ++Y YVA F D NG + ++ L + G S E Sbjct: 1005 PATRLGEAAQRYLDSLYVAAEDFLRHDDVGQDANGAPTNV-VDALDNAVETLVPGLSEEA 1063 Query: 1562 RVKGSGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVV-VRIAGEG--------- 1611 + +N L D + + + V+ R+ G Sbjct: 1064 AWPTLRAHLLLLGAAGQNPVDALRAAAGD-RELETAHDRAAVLDWRLDASGLRNAGAGPL 1122 Query: 1612 --RPWNPGAITGGRVWG----------DIPDNSVQPGAGNGEPVTAEVLAQRQAEEAIRR 1659 P P + WG + + V+ A + + A + E A Sbjct: 1123 PWMPAVPARLAKDPHWGAYLSQRAHLVEQLADQVRTRATDQAALPAWAQNGLRPEAATVA 1182 Query: 1660 ETERRADEIVRKMAENKPDLPDGKTEQAVREIAGQERDRAAITEREAALPEGVLREPQRV 1719 E + + + +P Q + +RA + AL E Sbjct: 1183 NVEVWRAAMQVLVDDRRPT--GAPQLQKASATWQRRLNRAVTGDHTPALKEWRQLLYSLA 1240 Query: 1720 REAVREIARENLLQERLQQMERDMVRDLQKEKT 1752 VR+ LL ERL M R V + +T Sbjct: 1241 P-QVRDDEFTPLLAERLAAMSRAGVTAHELLRT 1272 >UniRef50_Q11MR5 MobA/MobL protein n=32 Tax=Rhizobiales RepID=Q11MR5_MESSB Length = 1557 Score = 219 bits (557), Expect = 1e-54, Method: Composition-based stats. Identities = 114/593 (19%), Positives = 201/593 (33%), Gaps = 119/593 (20%) Query: 872 LPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTG-- 929 L + ++ F ++ + + F + ++ A L + G Sbjct: 278 LKQLSRERSTFDEREIAKALHRYVDDPAVFANIHAQLMASSDLVTLKPQQIDSDTGKVAD 337 Query: 930 --LLVSRASYEAEKSILRHILE------------GKEAVMPLMERVPGELMEKLTSGQRA 975 + +RA E + + E + L+E E +L + Q Sbjct: 338 VAVFTTRAMLRTEYDMAQSARELSRRSGFTVTSEKVGNAIRLVESRDPEKPFRLDAEQVD 397 Query: 976 ATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRS 1035 A R + + V G AG GK+T ++ A + E++ RVVG +A + Sbjct: 398 AVRHV-TGDSAISAVVGLAGAGKST----LLDAARIAWEADDRRVVGAALAGKAAEGLEE 452 Query: 1036 A-GVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRA 1094 + G+ ++TLAS+ +L G + ++DE+ MV + +AR ++ G +A Sbjct: 453 SSGIKSRTLASW----ELGWADGRDTLQKGDVLVIDEAGMVSSEQLARVLKIVEDAGAKA 508 Query: 1095 VASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPEL-REAVYSLINRDVERALS 1153 V GD QLQ I G FR R A + + RQ + R A VE AL Sbjct: 509 VLVGDPMQLQPIQAGAAFRAIVERIG--FAELTGVRRQREQWARGASRLFARGKVEEALD 566 Query: 1154 GLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIV 1213 +Q ++ + + + + D + Sbjct: 567 AY--------------------------AQHDRIVQLETRDAVIERIVEDWGQARADYRK 600 Query: 1214 RDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGE 1273 + + + L++ N+D LN I V + LG++ Sbjct: 601 KAESESRVLTGSELLVLAQTNDDVGKLNHAIRTVMRRQEALGED---------------- 644 Query: 1274 LRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYT 1333 ++T R A D LI L++A E AE + + Sbjct: 645 ----RAYQTERGARQFA-----------IGDRLIFLENAR-------FFEKRAEHLAVQQ 682 Query: 1334 PDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQH 1393 + G +R T E ++ TV +G VT + ++ Sbjct: 683 VKNGML--GTVVRTTNERGE------TLLTVKLDAGREVTF------------GQDTYRN 722 Query: 1394 IDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVY 1446 +D YA T H +QGA+ + L ++ L AYVA+SR + +Y Sbjct: 723 VDHGYAATVHKSQGATVDRTLVLATGMMDQHL------AYVAMSRHRDRADLY 769 Score = 90.7 bits (223), Expect = 5e-16, Method: Composition-based stats. Identities = 83/641 (12%), Positives = 180/641 (28%), Gaps = 102/641 (15%) Query: 244 AVGEDASLKSRDVAALDTRKSKQHV--------DPEIKMAEWMQTLKETGFDIRAYRDAA 295 G+ ++K+ + +T + + +A Sbjct: 190 WAGDKDTMKAWKIGWAETANKHLALAGHDIRLDGRSYAEQGLDGIAQSHLGPAKAALARK 249 Query: 296 DQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDV---LARTVGILPPENG 352 + + + + LS + F ++ L R V Sbjct: 250 GREMYFAPAALAKRQEMADRLADEPGLLLKQLSRERSTFDEREIAKALHRYVDDPAVFAN 309 Query: 353 VIERARAGIDEAISREQLIPLDREK----GLFTSGIHVLDELSVRALSRDIMKQNRVTV- 407 + + A D + Q I D K +FT+ + E + +R++ +++ TV Sbjct: 310 IHAQLMASSDLVTLKPQQIDSDTGKVADVAVFTTRAMLRTEYDMAQSARELSRRSGFTVT 369 Query: 408 --------------HPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELV 453 PEK A DAV + D +++ V G G AG+ + Sbjct: 370 SEKVGNAIRLVESRDPEKPFRLDAEQVDAVRHVTGD-SAISAVVGLAG-AGKSTLLDAAR 427 Query: 454 MMAREQGREVQIIAADRRSQMNMKQDERLSGELITG--RRQLLEGMAFTPGSTVIVDQGE 511 + R V A ++ +++ + + G +++D+ Sbjct: 428 IAWEADDRRVVGAALAGKAAEGLEESSGIKSRTLASWELGWADGRDTLQKGDVLVIDEAG 487 Query: 512 KLSLKETLTLLDGAARHNVQVLITDSG---QRTGTGSALMAMKD----AGVNTYRWQGGE 564 +S ++ +L + ++ Q G+A A+ + A + R Q + Sbjct: 488 MVSSEQLARVLKIVEDAGAKAVLVGDPMQLQPIQAGAAFRAIVERIGFAELTGVRRQREQ 547 Query: 565 QRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVL 624 + G+ A + + I+ L Sbjct: 548 WARGA------------------SRLFARGKVEEALDAYAQHDRIV------------QL 577 Query: 625 GLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDR---VTAQSHSL 681 + + + W G + + S R + V AQ++ Sbjct: 578 ETRDAVIERIVEDW--------------GQARADYRKKAESESRVLTGSELLVLAQTNDD 623 Query: 682 TLRDAQGETQVVRISSLDSSWSLFRPEK--MPVADGERLRVTGKIP----------GLRV 729 + V+R ++ E+ A G+RL +V Sbjct: 624 VGKLNHAIRTVMRRQEALGEDRAYQTERGARQFAIGDRLIFLENARFFEKRAEHLAVQQV 683 Query: 730 SGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSA-TV 788 G V + + ++ + + V+ T +++G+ T S + Sbjct: 684 KNGMLGTVVRTTNERGETLLTVKLDAGR-EVTFGQDTYRNVDHGYAATVHKSQGATVDRT 742 Query: 789 FASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLAR 829 T M + ++R LY + ++ EK R Sbjct: 743 LVLATGMMDQHLAYVAMSRHRDRADLYMAHEDFAPREKWGR 783 >UniRef50_Q0ZKG3 Putative uncharacterized protein n=1 Tax=Corynebacterium sp. L2-79-05 RepID=Q0ZKG3_9CORY Length = 1346 Score = 217 bits (551), Expect = 5e-54, Method: Composition-based stats. Identities = 173/1012 (17%), Positives = 325/1012 (32%), Gaps = 162/1012 (16%) Query: 61 PDGADLSRMQDGSNRHR---PGYDLTFSAPKSVSMMAMLGGDKR---LIDAHNQAVDFAV 114 P+ L+ + + NR + G DLTFS KSVS++ LG D+ + H QAV+ + Sbjct: 160 PERDVLAWLNEKKNRVKQPTSGVDLTFSPAKSVSLVWALGDDETRQTIEKIHQQAVEDTL 219 Query: 115 RQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKT 174 ++VE + ++ + F H +R +P LHTH +++N Q + Sbjct: 220 KEVEEEFLFTRTGGRGERVIKARGMIASTFMHYDTRAGDPDLHTHCLISNKVQAARGQQG 279 Query: 175 LSSDKVGKTGFIENVY--ANQIAFGRLYREKLKEQV-EALGYETEVV----GKHGMWEMP 227 L D+ K ++ Y N G+ Y+ K+ + + + L E GK +WE+ Sbjct: 280 LDDDQADKWRSLDARYLLKNSARIGQRYQVKMAQALGQELDLEFYERESDEGKAPVWEVA 339 Query: 228 GVPVEAF---SGRSQTIREAVGEDASL---------------KSRDVAALDTRKSKQHVD 269 G+ E S R R E A K A L+TR +K+ Sbjct: 340 GIDEELINSASQRRAGARPVYEEYAEKYRATHGHYPDMRTRNKLWQAAILETRDAKK--- 396 Query: 270 PEIKMAEWMQTLKET-----GFDIRAYRDAADQRADLRTLTPGPAS-QDGPDVQQAVTQA 323 P +AE + KE D+ + R A S + + + +A Sbjct: 397 PARSLAEHREEWKELLGGGQELDLDSLRQRGKAYASRSAFPADVLSDEYVFAIAELAEKA 456 Query: 324 IAGLSERKVQFT--------------------------YTDVLARTVGILPPENGVIERA 357 + +R+ +F +VL L E GV++ + Sbjct: 457 VEDTRQRRAEFNIRHLETSVSMHLTNWKFDNETHSDHVRQEVLEYAKKHLLTELGVVDSS 516 Query: 358 RAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRA---------LSRDIMKQNRVTVH 408 QLI + + + + + +E V A +S + + Q Sbjct: 517 HLPAALVREDGQLITAEHDGITYAAHATLEEEHKVLASLNELTGYTISDEAVDQALQRNV 576 Query: 409 PEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAA 468 + G + L LA G G G+ +A + + +G +V +A Sbjct: 577 EKHGFALNDGQAKMAHSLLVTGEKLACAVGPAG-TGKTASMAVVADAWKNEGHKVLGLAP 635 Query: 469 DRRSQMNMKQDERLSGELITGRRQLLE-------------GMAFTPGSTVIVDQGEKLSL 515 R+ + QD ++ + + G+ G ++VD+ + Sbjct: 636 SARAAQQLGQDANITAQTLAALTYRWRGVIGDSPRDINNLGVEINAGDMLLVDEAGMATT 695 Query: 516 KETLTLLDGAARHNVQV-LITDSGQRTGT--GSALMAMKDAGVNTYRWQGGEQRPATIIS 572 + L + A + L+ D Q G + + R ++ Sbjct: 696 ADLAALTEIADETGAVIRLVGDPHQLDAVETGGLFRTLVRQ--SNAVELDTVMRMGADVA 753 Query: 573 EPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMT 632 + D + R GD A E V G ++ +A+ + L G LG ++ Sbjct: 754 QADSSTRLRH--GDVNALDLYRERGW--VHGGNRHDMIAEAVEAHL---GDLGAEIDSIV 806 Query: 633 ALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRD-AQGETQ 691 S + V + + +G + Sbjct: 807 IASRK----------------------------------EDVNTANTLIQSELIERGIVE 832 Query: 692 VVRISSLDSSWSLFRPEKMPVADGERLRVTGKI---PGLRVSGGDRLQVASVSEDAMTVV 748 + V G+ + G RV G+R +VA + +D V Sbjct: 833 GFSPG-------VAVSGDARVHVGDTILTRKNDTLPSGRRVLNGERFEVAGLLDDGSLAV 885 Query: 749 VPGRAEPATLPVSDSPFTALKLENGWVET----PGHSVSDSATVFASVTQMAMDNATLNG 804 + T+ + + + ++ G+ T G +V ++ + + T A Sbjct: 886 KELNGKNKTMVL-PADYVREHVQLGYASTVYRAQGITVENARAIVGAETDR---RALYVA 941 Query: 805 LARSGRDVRLYSSLDE--TRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHT 862 + R+ +Y + D AE+ H S L + S H Sbjct: 942 MTRAKWQNHVYVADDLPFDFDAEQAHWHMSGEDK-PDYNDILERIVLRDSGQRSASDQH- 999 Query: 863 PAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDV 922 ++ ++ A + ++L + D+L GE+ A + G V Sbjct: 1000 --RELVNKAESTQQRRELFSTAADMLHTDYRHEVVEPAVIRALGELPATMTNGLDHDQAV 1057 Query: 923 AKGYGTGLLVSRASYE--AEKSILRHILEGKEAVMPLMERVPGELMEKLTSG 972 + + +++A E S LEG E V +++ + + T Sbjct: 1058 ERISTSIQRLNQAGVNGLRELSFATDGLEGAEDVGAVIQHRLEQQRPEATPE 1109 Score = 154 bits (389), Expect = 3e-35, Method: Composition-based stats. Identities = 102/508 (20%), Positives = 174/508 (34%), Gaps = 70/508 (13%) Query: 877 SKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKR-GDLLYVDVAKGYGTGLLVSRA 935 ++L AK G + A ++ G L+ + + + A Sbjct: 488 ETHSDHVRQEVLEYAKKHLLTELGVVDSSHLPAALVREDGQLITAE----HDGITYAAHA 543 Query: 936 SYEAEKSILRHILE------GKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTV 989 + E E +L + E EAV ++R + L GQ +L T ++ Sbjct: 544 TLEEEHKVLASLNELTGYTISDEAVDQALQRNVEKHGFALNDGQAKMAHSLLVTGEKLAC 603 Query: 990 VQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM-RSAGVDAQTLASF-- 1046 G AG GKT V A ++E +V+GL P+ RA ++ + A + AQTLA+ Sbjct: 604 AVGPAGTGKTASMAVVADA----WKNEGHKVLGLAPSARAAQQLGQDANITAQTLAALTY 659 Query: 1047 -----LHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTD 1101 + D+ + + + L+DE+ M D+A + G GD Sbjct: 660 RWRGVIGDSPRDINNLGVEINAGDMLLVDEAGMATTADLAALTEIADETGAVIRLVGDPH 719 Query: 1102 QLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPS 1161 QL A+ G FR VRQ+ +V+ Sbjct: 720 QLDAVETGGLFRTL--------------VRQS----------------------NAVELD 743 Query: 1162 QVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTP 1221 V R A S T H L +++ + G D+ EA + D Sbjct: 744 TVMRMGADVAQADSSTRLRHGDVNALDLYRERGWVHGGNRHDMIAEAVEAHLGD-----L 798 Query: 1222 EAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWE 1281 A ++++ ED N++I + G + V V A + G+ + Sbjct: 799 GAEIDSIVIASRKEDVNTANTLIQSELIERGIVEGFSPGVAVSGDARVHVGDTILTRKND 858 Query: 1282 THRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVT------LYTPD 1335 T +++ +AG+ D L + N ++ P + V E V +Y Sbjct: 859 TLPSGRRVLNGERFEVAGLLDDGSLAVKELNGKNKTMVLPADYVREHVQLGYASTVYRAQ 918 Query: 1336 TIRVGTGDRMRFTKSDRERGYVANSVWT 1363 I V + ++DR YVA + Sbjct: 919 GITVENARAIVGAETDRRALYVAMTRAK 946 Score = 74.9 bits (182), Expect = 3e-11, Method: Composition-based stats. Identities = 29/124 (23%), Positives = 50/124 (40%), Gaps = 11/124 (8%) Query: 1331 LYTPDTIRVGTGDRMRFTKSDR---ERGYVANSVWTVTAV--SGDSVTLSDGQQTREIRP 1385 + RV GD + K+D R + + V + G + + + Sbjct: 838 VAVSGDARVHVGDTILTRKNDTLPSGRRVLNGERFEVAGLLDDGSLAVKELNGKNKTMVL 897 Query: 1386 GQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQV 1445 + +H+ L YA T + AQG + A A+ G E +R+ + YVA++R K V Sbjct: 898 PADYVREHVQLGYASTVYRAQGITVENARAIVGAETDRRAL------YVAMTRAKWQNHV 951 Query: 1446 YTDN 1449 Y + Sbjct: 952 YVAD 955 >UniRef50_C8NSP3 Putative uncharacterized protein n=3 Tax=Corynebacterium RepID=C8NSP3_COREF Length = 1135 Score = 215 bits (548), Expect = 1e-53, Method: Composition-based stats. Identities = 179/1073 (16%), Positives = 349/1073 (32%), Gaps = 150/1073 (13%) Query: 1 MMSIAQVRSAGSAGNYYTDK-------DNYYVLG--SMGERW-----AGRGAEQLGLQG- 45 +++IA++ + +YY DNYY + + W A LG++ Sbjct: 15 VLTIAKLG--AHSVSYYDSTVAEGIGPDNYYSEAGSAPAQVWSRSDRVAECAAFLGVEQG 72 Query: 46 -SVDKDVFTRLLEGRL-PDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLI 103 S+D D + P G L ++ GYDLTFSAPKSVS++ L G + Sbjct: 73 QSLDGDQVKKWFNHTTAPSGNRLGQVMREDGVR--GYDLTFSAPKSVSVLWGLSGRDEVR 130 Query: 104 ----DAHNQAVDFAVRQVEALAS-TRVMTDGQSETV-LTGNLVMALFNHDTSRDQEPQLH 157 +AH AV A+ +E AS TR + ++ V T L + H TSR +P +H Sbjct: 131 QVVDEAHAMAVARALDYLETHASYTRRRDENKTLIVDKTVGLSGVKYEHRTSRAGDPHVH 190 Query: 158 THAVVANVTQHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQV-EALGYETE 216 +H ++AN + L D ++ +++Y A G LY+ L+E++ LG E Sbjct: 191 SHVLLAN--------RQLCPDGQVRSVDGKSLYHEARAAGMLYQAVLREELTRQLGVEWG 242 Query: 217 VVGKHGMWEMPGVP----VEAFSGRSQTIREAVGEDASLKSRD---VAALDTRKSKQHVD 269 V K G ++ G+ + AFS R+ I + E+A + VA TR++K Sbjct: 243 EVTK-GQADIKGLNDPAVLTAFSTRTTEIGQWEAENALTTNYQLQRVAQKKTRQTKNVDA 301 Query: 270 PEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSE 329 + + + + + P P + + + Sbjct: 302 VLSDLETQWAQQRAAQQVAQFAAGLGAGATEEKKNLPTPEA------------VLTEVIA 349 Query: 330 RKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISRE--------------QLIPLDR 375 + FT DV+ + ++P + ++ + ++ R Sbjct: 350 ERSTFTRADVVEKCAEMIPVGTLSPDEILGFVEATATHALESVALSVTPDRAREVDNTQR 409 Query: 376 EKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRT--AGYSDAVSVLAQDRPSL 433 E + V+ E++ N V+ V T ++A++ + Sbjct: 410 EGSQRFTTDAVIQEVNKGIDLATTKTHNAVSADSIVPVEGTLSPAQAEAMAAVVSSDFLA 469 Query: 434 AIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQL 493 ++V G AG+ + G+ V +A ++ M E ++ E T R L Sbjct: 470 SVVVAPAG-AGKTSSLKAARQAWEHAGKTVIGLAPTGKAADVMVG-EHVAHESSTIARAL 527 Query: 494 LEGMAFTP-----------GSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTG 542 P + V+VD+ ++ + + LL+ ++++ + Sbjct: 528 YGTEDLAPAQVAARLGWNRDTVVVVDEAGMVATPDVVRLLEITRAAQAKIVLVGDPHQYA 587 Query: 543 TGSALMAMKDAGV----------NTYRWQGGEQRPATIISEPDRNVRYARLAGDFAAS-- 590 A M +R + +R A+I R A + Sbjct: 588 AVKARSGMLATLAYELPDAVELTEVFRQRDVAEREASIQLRSGDKDSIKRAAHWYMLQGR 647 Query: 591 --------------------VKAGEESVAQVSGVREQAILT---QAIRSELKTQGVLGLP 627 AG++S+ + + L Q IR++ + + L Sbjct: 648 LEAGSTTAMLDDALAGWTSDTAAGKDSLLVAATGEQVQALNAGAQKIRAD-RGELYLSEA 706 Query: 628 EVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSH-SLTLRDA 686 T D D ++ R+ R+ +D++ S T D Sbjct: 707 RELSTGQWLHAGDVLLTRKNDY----DLLTSAGDVVRNGQRWRVDQLHGDGSISATRLDD 762 Query: 687 QGETQVVRISSLDSSWSL--------FRPEKMPVA-----DGERLRVTGKIPGLRVSGGD 733 T + S L S L + + VA G+ R + +P R G+ Sbjct: 763 TQATATIPASYLKESGQLGYASTGHSAQGATVDVARVVAGAGQVDRASVYVPLTRGREGN 822 Query: 734 RLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTAL--KLENGWVETPGHSVSDSATVFAS 791 L + G ++ L + H V +A + Sbjct: 823 YLYLTESMPGDTDTGHGGVTPTKRREGAEYARDLLIAAAARDGADQTPHQVWGTARADWA 882 Query: 792 VTQMAMDNATLNGLARSGRDV-RLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLE 850 +T++A +N +G + + + + R + +Q E + Sbjct: 883 LTRLAASGEFINYSPFTGTRMGEVMAEREAQRAERFSEFFTLTQIPPKQKSALPSEPDVS 942 Query: 851 TA-ISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEIN 909 + ++ ++ H A + + + A T+L + Sbjct: 943 EKCATEVNASPQDEVKRYQHRAGEYAAALEQVRAQQAQAQAQLDAMAGEK--TQLESALR 1000 Query: 910 AQIKRGDLLYVDVAKGYGTGLLVSRASYEAEK---SILRHILEGKEAVMPLME 959 ++ + + ++ R+ E E+ + ++ G+ V M Sbjct: 1001 ELEQKKRQVTAESQGRGFFAKMIKRS--EDERRLDQLEAALVAGRGEVEKFMP 1051 Score = 171 bits (432), Expect = 3e-40, Method: Composition-based stats. Identities = 119/665 (17%), Positives = 193/665 (29%), Gaps = 122/665 (18%) Query: 844 AGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTE 903 AG T + + ++ L + V K V L+ + T Sbjct: 328 AGATEEKKNLPTPEAVLTEVIAERSTFTRADVVEKCAEMIPVGTLSPDEILGFVEATATH 387 Query: 904 LGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPG 963 + + VD + G+ + A + + + VP Sbjct: 388 ALESVALSVTPDRAREVDNTQREGSQRFTTDAVIQEVNKGIDLATTKTHNAVSADSIVPV 447 Query: 964 ELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGL 1023 E L+ Q A ++ + +VV AG GKT+ + A E V+GL Sbjct: 448 E--GTLSPAQAEAMAAVVSSDFLASVVVAPAGAGKTSSLK----AARQAWEHAGKTVIGL 501 Query: 1024 GPTHRAVGEM--RSAGVDAQTLASFLH---DTQLQQRSGETPDFSNTLFLLDESSMVGNT 1078 PT +A M ++ T+A L+ D Q + +T+ ++DE+ MV Sbjct: 502 APTGKAADVMVGEHVAHESSTIARALYGTEDLAPAQVAARLGWNRDTVVVVDEAGMVATP 561 Query: 1079 DMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELRE 1138 D+ R + A + V GD Q A+ D + E+ RQ Sbjct: 562 DVVRLLEITRAAQAKIVLVGDPHQYAAVKARSGMLATLAYELPDAVELTEVFRQRD---- 617 Query: 1139 AVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKG 1198 A + + + + A ML+G Sbjct: 618 -------------------------------VAEREASIQLRSGDKDSIKRAAHWYMLQG 646 Query: 1199 EAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQ 1258 + + + +T T ++ L+V E + LN+ +R GEL Sbjct: 647 RLEAGSTTAMLDDALAGWTSDTAAGKDS-LLVAATGEQVQALNAGAQKIRADRGEL---- 701 Query: 1259 VMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRL 1318 + + W D L+ N Y + Sbjct: 702 ---------YLSEARELSTGQWLHAGDVLLTRKNDYDLLT-------------------- 732 Query: 1319 ISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGD---SVTLS 1375 GD +R W V + GD S T Sbjct: 733 ---------------------SAGDVVR-----------NGQRWRVDQLHGDGSISATRL 760 Query: 1376 DGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVA 1435 D Q P E L YA T H AQGA+ A + G S YV Sbjct: 761 DDTQATATIPASYLKESG-QLGYASTGHSAQGATVDVARVVAGA-----GQVDRASVYVP 814 Query: 1436 LSRMKQHVQVY-TDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDV 1494 L+R ++ +Y T++ G TD + V + E D + A R + + Sbjct: 815 LTRGREGNYLYLTESMPGDTDTGHGGVTPTKRREGAEYARDLLIAAAARDGADQTPHQVW 874 Query: 1495 AAGRA 1499 RA Sbjct: 875 GTARA 879 >UniRef50_C4DRT0 TrwC relaxase n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DRT0_9ACTO Length = 1623 Score = 213 bits (543), Expect = 4e-53, Method: Composition-based stats. Identities = 131/754 (17%), Positives = 239/754 (31%), Gaps = 125/754 (16%) Query: 60 LPDGADLSRMQDGSNRH--RPGYDLTFSAPKSVSMMAMLGGDKRLID----AHNQAVDFA 113 P ++ Q+ + + G+DL F+ KS +++ L D R+ AH+ AVD Sbjct: 145 TPAEIKQAKQQEAAKQRCGVAGFDLVFAPVKSAALVWALHPDVRVRQQVKAAHDAAVDSV 204 Query: 114 VRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVT-QHNGEW 172 + +E A+ G + T L+ A F+H SR +P LHTH VAN +G+W Sbjct: 205 MELLEEHAAHTRAGTGGVAQLDTKGLIAARFDHFDSRAGDPNLHTHIPVANKVLGRDGKW 264 Query: 173 KTLSSDKVGKTGFIENVYANQIAFGRLYREKLK-EQVEALGYETEVVG----KHGMWEMP 227 ++L + +YA +A Y + + E V LG K + E+ Sbjct: 265 RSLDA---------RGIYAMTVAASEHYNTRFETEMVHRLGVTFTDREAAGSKRPVREID 315 Query: 228 GVP---VEAFSGRS--------QTIREAVGEDASL-------KSRDVAALDTRKSKQHVD 269 G+P ++ FS R Q I + + K A LDTR K + Sbjct: 316 GIPAAMIKHFSRRRLDLEARYKQLIAAYRADHGTDPPAAICHKLARQATLDTRPDKPTLR 375 Query: 270 PEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSE 329 +M + + F +A R R+ S + + + ++ Sbjct: 376 SLKQMRQEWEADLIHTFGGKALRHIT-SAVPTRSAVAEAVSLSTDEAETIAASVVRTVAS 434 Query: 330 RKVQFTYTDVLART------------------------VGILPPENGVIERARAGIDE-- 363 + +T ++ A P + + A + +DE Sbjct: 435 QHSTWTRWNLHAEAERTLRAAFRFPTREAHDHAVEVVMALATSPAHSIRIDAPSLVDEPD 494 Query: 364 --AISREQLIPLDREKGLFTSGIHVLDELSVRALSRD--------IMKQNRVTVHPEKSV 413 + + + +TS + E + ++ + S Sbjct: 495 VLRRADGESVFHQHGSTRYTSQAVLDAEQRLLGAAKTPTDKGLSAGFVTGVLDGFDTTSH 554 Query: 414 PRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQ 473 G + A L V G AG+ + G + +A S Sbjct: 555 QLDPGQRHLAAGFATT-DRLLAVGIGPGGAGKTTAMKAYAHTLTTAGHRLIPLATSANSA 613 Query: 474 MNMKQDERLSGELITGRRQ-------------------LLEGMAFTPGSTVIVDQGEKLS 514 + D + + + A PG V+VD+ + Sbjct: 614 AVLAADLDTPADNLHKFLWEHSRGHHANALKHGDPVPESAQFFALKPGDVVLVDEAGQAG 673 Query: 515 LKETLTLLDGAARHNVQV-LITDSGQRTGT--GSALMAM-KDAG---VNTYRW--QGGEQ 565 L+ A RH QV L+ D Q + G AL + +AG ++T E Sbjct: 674 TFALDQLITIAKRHGAQVRLLGDHRQLSAVESGGALRLIAAEAGAFELDTLHRFSDPAEA 733 Query: 566 RPATIISEPDRN--------------VRYARLAGDFAASVKA---GEESVAQVSGVREQA 608 R + E D + + A + + A + G SV + + Sbjct: 734 RATLKLREGDASGLDHYEIAGRIFGGSKDAMIEKAYTAWHRDLSTGRTSVMIAATNADVT 793 Query: 609 ILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDR 668 L R++ G + V + + + + G+ + + R+ D Sbjct: 794 ALAARARTDRIRAGHVKTTGVDLHDGNTAGVGDWVITRHNH--RGLRLNRGKDFVRNGDI 851 Query: 669 YVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSW 702 + + R + SL+LR V + + + Sbjct: 852 WTVIR-HHRDGSLSLRHHDHRGTVRIPADYVAEY 884 Score = 113 bits (281), Expect = 9e-23, Method: Composition-based stats. Identities = 84/541 (15%), Positives = 155/541 (28%), Gaps = 93/541 (17%) Query: 838 EQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAE 897 + ++ +A++ S A+ + V S+ ++ +L EA+ Sbjct: 395 KALRHITSAVPTRSAVAEAVSLSTDEAETIAASVVRTVASQHSTWTRWNLHAEAERTLRA 454 Query: 898 GTGFTELGGEINA---------------QIKRGDLLYVDVA----------KGYGTGLLV 932 F +A +I L+ +G+ Sbjct: 455 AFRFPTREAHDHAVEVVMALATSPAHSIRIDAPSLVDEPDVLRRADGESVFHQHGSTRYT 514 Query: 933 SRASYEAEKSILRHILE--GKEAVMPLMERVPG---ELMEKLTSGQRAATRMILETSDRF 987 S+A +AE+ +L K + V +L GQR T Sbjct: 515 SQAVLDAEQRLLGAAKTPTDKGLSAGFVTGVLDGFDTTSHQLDPGQRHLAAGFATTDRLL 574 Query: 988 TVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPT-HRAVGEMRSAGVDAQTLASF 1046 V G G GKTT +A + + R++ L + + A A L F Sbjct: 575 AVGIGPGGAGKTTAMKAYAHTL----TTAGHRLIPLATSANSAAVLAADLDTPADNLHKF 630 Query: 1047 L-------------HDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGR 1093 L H + + + + L+DE+ G + + + G + Sbjct: 631 LWEHSRGHHANALKHGDPVPESAQFFALKPGDVVLVDEAGQAGTFALDQLITIAKRHGAQ 690 Query: 1094 AVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALS 1153 GD QL A+ G RL + A + + R Sbjct: 691 VRLLGDHRQLSAVESGGALRLIAAEAGA--FELDTLHR---------------------- 726 Query: 1154 GLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIV 1213 A + + + L + + G + + Y A Sbjct: 727 -------------FSDPAEARATLKLREGDASGLDHYEIAGRIFGGSKDAMIEKAYTAWH 773 Query: 1214 RDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRD-- 1271 RD ++++ N D L + R +AG + V + NTA + D Sbjct: 774 RD-----LSTGRTSVMIAATNADVTALAARARTDRIRAGHVKTTGVDLHDGNTAGVGDWV 828 Query: 1272 GELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTL 1331 +R + + + DG ++L+ + + P + VAE V L Sbjct: 829 ITRHNHRGLRLNRGKDFVRNGDIWTVIR-HHRDGSLSLRHHDHRGTVRIPADYVAEYVEL 887 Query: 1332 Y 1332 Sbjct: 888 A 888 Score = 64.9 bits (156), Expect = 3e-08, Method: Composition-based stats. Identities = 44/219 (20%), Positives = 73/219 (33%), Gaps = 26/219 (11%) Query: 1295 HRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMR-------F 1347 I+ + +T A T I GV L+ +T G GD + Sbjct: 780 RTSVMIAATNADVTALAARARTDRIRAGHVKTTGVDLHDGNTA--GVGDWVITRHNHRGL 837 Query: 1348 TKSDRERGYVANSVWTVTAV-SGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQ 1406 + + +WTV S++L +R + ++++LAYA TA Q Sbjct: 838 RLNRGKDFVRNGDIWTVIRHHRDGSLSLRHHDHRGTVRIPADYVAEYVELAYATTATRIQ 897 Query: 1407 GASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWT----DAINNAV- 1461 GA+ A AL + R E YVA SR + + +Y D + Sbjct: 898 GATVDTAHALVTDDMAR------EHLYVAASRARHNTSLYAVTHVNLPVDEDDRLFRPDF 951 Query: 1462 --QKGTAHDVFE---PKPDREVMNAERLFSTARELRDVA 1495 A ++ E + E E + + +A Sbjct: 952 DPDATAAREILETVVARESAERSATETIRDAQNDAESLA 990 >UniRef50_Q1HG56 TraA n=1 Tax=Rhodococcus erythropolis RepID=Q1HG56_RHOER Length = 1506 Score = 212 bits (538), Expect = 2e-52, Method: Composition-based stats. Identities = 179/999 (17%), Positives = 305/999 (30%), Gaps = 158/999 (15%) Query: 38 AEQLGLQGSVDKDVFTRLLEGRLPDGADL----SRMQDGSNRHRPGYDLTFSAPKSVSMM 93 AE L V +F + D +L S ++ + G+DL F+ PKSVS M Sbjct: 151 AESGALMEKVGTALFEETHQRSAQDPQELWSWISAQKNRVRQPVAGFDLVFTPPKSVSTM 210 Query: 94 AMLGGD---KRLIDAHNQAVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSR 150 L D +++ H++ V + +E A E T +V L++H SR Sbjct: 211 WALADDDLRRQIERIHHETVKDTLGWIEKEACFTRTGATSQEHQDTTGVVATLYDHYDSR 270 Query: 151 DQEPQLHTHAVVANV--TQHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQV 208 +P LHTHAV++ T+ +G+W+ L S + + G + N +L+ Sbjct: 271 AGDPNLHTHAVLSVKVCTEKDGKWRALFSSTLHRYGVPASQRYNAAIMSKLHT------- 323 Query: 209 EALGY----ETEVVGKHGMWEMPGVPV---EAFSGRSQTIREAVGE-------------- 247 LG+ + G+ + E+ VP E FS R I + Sbjct: 324 -ELGFGLTERSTGRGRQNVVEIAEVPQQLCEMFSSRRTQIETRRDQLVAEYRQKHDRMPS 382 Query: 248 -DASLKSRDVAALDTRKSKQHV-DPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLT 305 A A LDTR KQ W+ + D A A+Q ++ Sbjct: 383 AKAMYALYQQANLDTRAGKQEPQTLREMQNNWITRSAQILGDDTAVGALAEQWRGVQREH 442 Query: 306 PGPASQD-----GPDVQQAVTQAIAGLSERKVQFTYTDVLA-----RTVGILPPENGVIE 355 + + + + L + + T V + P E Sbjct: 443 AAGVREHQTMRKAGTPAEEAKRVVEHLENGRATWAITHVHSAVDANFAAVSFPDEAARAA 502 Query: 356 RARAGIDEAI--------------------SREQLIPLDREKGLFTSGIHVLDELSVRAL 395 +A + + + I + L TS + E + Sbjct: 503 AVKAVTEHVLGASVHLPAAELPPAPEALRRRDGEFILTNHGTALHTSASIITAEQFMLDA 562 Query: 396 SRD---------IMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQR 446 +R + + + P AG + LA+ G G G+ Sbjct: 563 TRTPTAYIAAQAGLDKVVEKIARTSDHPLNAGQRELAEHFVGSGTLLAVGVGPAG-TGKT 621 Query: 447 ERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGR------------RQLL 494 + + R G EV +A + + ++ ++ + R L Sbjct: 622 TSMKAVTDTWRATGHEVIALAPSAVAAETLGEEIDVTAHTLATLTYPWRGLEGHEPRSLP 681 Query: 495 EGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQV-LITDSGQRTGT--GSALMAMK 551 E + G+ ++VD+ S K+ + + AA V L+ D Q G AL + Sbjct: 682 EHIEIPAGAMLLVDEASLASTKDLAAITEIAAAKGAVVRLLGDPNQLDAVETGGALRLLA 741 Query: 552 DAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILT 611 + + + D LA ++ GEES ++ R Sbjct: 742 EE-------TNAPELTVVVRFGKDTEQAENSLA------LRHGEESSLELFYAR------ 782 Query: 612 QAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVI 671 +G + + + M + + N Y Sbjct: 783 -----GWVHEGTAAEMKDAAATAYLADI-GAGKTSIVMLSTRDDVREVNLA--IQAHYRA 834 Query: 672 DRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVT-GKIPGLRVS 730 +++TL D + + L R K RLR GK + V Sbjct: 835 AGTAKAGNTVTLSDE--------LDAGVGDIVLTRKNKR------RLRTKGGKRRNMFVR 880 Query: 731 GGDRLQVASVSEDAMTVVVPGRAE-PATLPVSDSPFTALKLENGWVETPGHSVSDSA-TV 788 GD V +V+E+ + E TLP + E G+ T S + T Sbjct: 881 NGDLWTVTAVNENGSLNLRSKTHEGTITLPAR---YVKRNTELGYAATVHRSQGITVDTS 937 Query: 789 FASVTQMAMDNATLNGLARSGRDVRLYSS------LDETRTAEKLARHPSFTVVSEQIKT 842 +V R + LY D +P+ V E+I Sbjct: 938 HTTVGHSTNRPGLYVATTRGRTENHLYVPVEPGVTQDTEGMHLGSINNPASREVLEKI-- 995 Query: 843 RAGETSLETAISHQKSAL-HTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGT-- 899 A + + AI+ + AL H + + + A S+ + D+L A A T Sbjct: 996 LANDNGHKAAITEIREALEHARSPERLREAYHAAHSRLRDRWLDDVLDRALPAALLATIA 1055 Query: 900 -----GFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVS 933 EL + RGD +G L + Sbjct: 1056 AENPGSLAELRTTLGQAHDRGDSARRIFNDALASGELHT 1094 Score = 156 bits (394), Expect = 7e-36, Method: Composition-based stats. Identities = 108/578 (18%), Positives = 189/578 (32%), Gaps = 142/578 (24%) Query: 911 QIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHIL------EGKEAVMPLMERVPGE 964 + + G+ + +GT L S + AE+ +L + + ++E++ Sbjct: 531 RRRDGEFI----LTNHGTALHTSASIITAEQFMLDATRTPTAYIAAQAGLDKVVEKIART 586 Query: 965 LMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLG 1024 L +GQR + + V G AG GKTT +AV + V+ L Sbjct: 587 SDHPLNAGQRELAEHFVGSGTLLAVGVGPAGTGKTTSMKAVTDTWR----ATGHEVIALA 642 Query: 1025 PTHRAVGEM-RSAGVDAQTLASF------LHDTQLQQRSGETPDFSNTLFLLDESSMVGN 1077 P+ A + V A TLA+ L + + + + L+DE+S+ Sbjct: 643 PSAVAAETLGEEIDVTAHTLATLTYPWRGLEGHEPRSLPEHIEIPAGAMLLVDEASLAST 702 Query: 1078 TDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELR 1137 D+A + AA G GD +QL A+ G RL + A + +VR + Sbjct: 703 KDLAAITEIAAAKGAVVRLLGDPNQLDAVETGGALRLLAEETNAP--ELTVVVRFGKDTE 760 Query: 1138 EAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLK 1197 +A SL H +E+ L + + Sbjct: 761 QAENSLA----------------------------------LRHGEESSLELFYARGWVH 786 Query: 1198 GEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKE 1257 + + +A Y A + ++++ +D R +N I Sbjct: 787 EGTAAE----MKDAAATAYLADI-GAGKTSIVMLSTRDDVREVNLAIQA----------- 830 Query: 1258 QVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTR 1317 ++R AG +K +TL D Sbjct: 831 ------------------------------------HYRAAGTAKAGNTVTLSDE----- 849 Query: 1318 LISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERG--YVANSVWTVTAVSGD-SVTL 1374 +A + L + R+ TK + R +WTVTAV+ + S+ L Sbjct: 850 ----LDAGVGDIVLTRKNKRRLR-------TKGGKRRNMFVRNGDLWTVTAVNENGSLNL 898 Query: 1375 SDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYV 1434 I +++ +L YA T H +QG + + G NR + YV Sbjct: 899 RSKTHEGTITLPARYVKRNTELGYAATVHRSQGITVDTSHTTVGHSTNRPGL------YV 952 Query: 1435 ALSRMKQHVQVY-------TDNRQGW-TDAINNAVQKG 1464 A +R + +Y T + +G +INN + Sbjct: 953 ATTRGRTENHLYVPVEPGVTQDTEGMHLGSINNPASRE 990 >UniRef50_C0QEU8 RecD1 n=2 Tax=Desulfobacterales RepID=C0QEU8_DESAH Length = 826 Score = 210 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 110/680 (16%), Positives = 214/680 (31%), Gaps = 71/680 (10%) Query: 828 ARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDL 887 A + G L + Q I + V + F L Sbjct: 182 AIDTVSRDPYQLANDFYGIGFFSADKVALSIGLSLDSPQRIMAGIEHVLAAGRNFGHCFL 241 Query: 888 LTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGY------GTGLLVSRASYEAEK 941 + A +L + + + + + + + SR+ Y E+ Sbjct: 242 TFSQINQQASELLQLDLTHGLTRLLDQMEQDRLVMVRHLVIDNKVAEPCYYSRSLYFDER 301 Query: 942 SILRHILEG-------KEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYA 994 + + + ++ V + R +L+ Q A+ I+ F+V+ G Sbjct: 302 YVAKRVKASIGPCPVDRQRVTAWIHRYCRVNAMELSLEQAASVEGIVGEP--FSVLTGGP 359 Query: 995 GVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA-GVDAQTLASFLHDTQLQ 1053 G GKTT R ++ + + V+ PT RA M G +A+T+ L Sbjct: 360 GCGKTTTTRVLVELIRAM----GRSVLLAAPTGRAAQRMEELIGQEAKTIHRLLGWQNGS 415 Query: 1054 QRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFR 1113 R E ++DE SM+ T A + A + V GD+DQL ++ G + Sbjct: 416 FRKNEKSPLDCDFLIVDECSMLDITLTASLLKAVPAA-CQVVFIGDSDQLPSVGAGNVLK 474 Query: 1114 LQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPE 1173 ++ + EI RQ E Y+ E +P ++ + Sbjct: 475 DIIASNSVACFRLTEIFRQARESLIIKYAHKINQGEIPWIESPFKRPDAWQQRVDCLFVD 534 Query: 1174 HSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRD---------------YTG 1218 E + Q + ++ E +E V D + Sbjct: 535 A--DEATREQLTFINRVKRLVDDPRENQTSRVSNPFEFGVNDPGLHGNPITIPKKFQHVD 592 Query: 1219 RTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLS 1278 +T I + V +K + L+T + + Sbjct: 593 LQQVCGAKTEI------------EELKAVLKKVHPWSSLRYGYTALDTVKMLF--QHWIP 638 Query: 1279 TWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIR 1338 + + ++ + G + +I ++P + + Sbjct: 639 KYYGSSSEIQILTPMTRGTLGTINLNRVIQAA--------VNPLTHGTAQLKV---GERI 687 Query: 1339 VGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVT--LSDGQQTREIRPGQEQAEQHIDL 1396 GDR+ K++ + G + + ++ +T +S RE+ +E+ + +DL Sbjct: 688 FRVGDRVIHRKNNYDLGVFNGDIGRIVSIDNVELTCVVSFFPDGREVIYQKEEVIE-LDL 746 Query: 1397 AYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDA 1456 AYA+T H +QG F I + M Y L+R + + ++ R+ A Sbjct: 747 AYAVTIHKSQG--SEFEIVIIPVMTQHYKMLFRNLIYTGLTRAR-TLALFVGTRKALAMA 803 Query: 1457 INNAV--QKGTAHDVFEPKP 1474 + N Q+ TA + +P Sbjct: 804 VMNQDTGQRQTALEQLLAQP 823 Score = 59.1 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 58/181 (32%), Gaps = 11/181 (6%) Query: 414 PRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQ 473 A SV ++++G G G+ LV + R GR V + A R+ Sbjct: 333 AMELSLEQAASVEGIVGEPFSVLTGGPGC-GKTTTTRVLVELIRAMGRSVLLAAPTGRAA 391 Query: 474 MNMKQDERLSGELITGRRQLLEGMAFTPGST------VIVDQGEKLSLKETLTLLDGAAR 527 M++ + I G + +IVD+ L + T +LL Sbjct: 392 QRMEELIGQEAKTIHRLLGWQNGSFRKNEKSPLDCDFLIVDECSMLDITLTASLLKAVPA 451 Query: 528 HNVQVLITDSGQ--RTGTGSALMAMKDAGVNTYRWQGG--EQRPATIISEPDRNVRYARL 583 V I DS Q G G+ L + + Q ++I + + + Sbjct: 452 ACQVVFIGDSDQLPSVGAGNVLKDIIASNSVACFRLTEIFRQARESLIIKYAHKINQGEI 511 Query: 584 A 584 Sbjct: 512 P 512 >UniRef50_Q6SK28 TraA-like protein n=2 Tax=Arthrobacter aurescens RepID=Q6SK28_ARTAU Length = 1484 Score = 210 bits (534), Expect = 4e-52, Method: Composition-based stats. Identities = 126/603 (20%), Positives = 210/603 (34%), Gaps = 104/603 (17%) Query: 36 RGAEQLGLQGSVDKDVFTRLLEGRLPD-----GADLSRMQDGSNRHRPGYDLTFSAPKSV 90 AE+ ++ + +F GR P G ++ GYDLTF+ KS+ Sbjct: 139 NAAERHRIRATAGAVMFREG-HGRPPASKEELGRYITAQLRPQQNAVAGYDLTFTPVKSI 197 Query: 91 SMMAMLGGD---KRLIDAHNQAVDFAVRQVEALA-STRVMTDGQSETVLTGNLVMALFNH 146 S++ LG + + DA A++ ++ +E A +TR+ T+G +++ + G L F H Sbjct: 198 SVLWALGDADTRRLVEDAQQAALNDSIEYLETHALATRLGTNGIAQSSVKGGLTATAFRH 257 Query: 147 DTSRDQEPQLHTHAVVANVTQH-NGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLK 205 SR +P LHTH VV+N Q G WK++ + ++ +A Y +++ Sbjct: 258 HDSRLGDPNLHTHVVVSNKVQDLAGNWKSIDGKLLHRS---------AVAVSEHYNTRIQ 308 Query: 206 EQVEALGYETEVV----GKHGMWEMPGVPVE---AFSGRSQTIREAVGE----------- 247 +E G E K + E+ VP E FS RS+ IR ++ E Sbjct: 309 AHLEDHGVRFEARTVNGSKQPVMEIASVPRELISLFSKRSEGIRTSLTELRQAYEEQHGH 368 Query: 248 ----DASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRT 303 A +K A LDTR K+ +AE + + D A RT Sbjct: 369 SPDRAALIKLAQAATLDTRPDKEAP---KTLAEQATMWRHEAGTLYTEDDLAR-ITGTRT 424 Query: 304 LTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLART---VGILPPENG-------- 352 T P + G DV A + I +S+++ +T +V+A E+G Sbjct: 425 NTIRPIAA-GIDVDAAARRIIDAVSDKRSTWTAQNVMAEANRWAKEYAAEHGPVPHGTVA 483 Query: 353 --------------VIERARAGIDEAISREQLIPLD-REKGLFTSGIHVLDEL------- 390 ++ + + R +TS + DE Sbjct: 484 SVVSRSLGTASVRITPDQVHGRFEALTRNAGTADFNHRTDTRYTSTKILEDENLLLRAGH 543 Query: 391 -------SVRALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAA 443 S++ + N+ EKS P G D A L++ G G Sbjct: 544 KDVIPAASMQDFDAAVAAYNQAVATGEKSHPLDTGQIDLAREFATSSKLLSVGIGAAG-T 602 Query: 444 GQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAF---- 499 G+ + + G V +A + N+ ++ Sbjct: 603 GKSSSMGLVRAAITHAGGRVIGLAPSAVAAANLGGQLGVAAATTDKFLHTNRYPDHDPDR 662 Query: 500 ---------TPGSTVIVDQGEKLSLKETLTLLDGAARHNVQV-LITDSGQRTG--TGSAL 547 TPG+ VIVD+ + ++ V LI D Q + G AL Sbjct: 663 GTAAGPFRVTPGTVVIVDEAGMQGTGKLADVVRVVEAGGGLVRLIGDDRQLSAVQAGGAL 722 Query: 548 MAM 550 + Sbjct: 723 RLL 725 Score = 124 bits (311), Expect = 3e-26, Method: Composition-based stats. Identities = 109/594 (18%), Positives = 184/594 (30%), Gaps = 59/594 (9%) Query: 683 LRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVS- 741 ++D G + + L ++ E L G R G + V ++ Sbjct: 277 VQDLAGNWKSID-GKLLHRSAVAVSEHYNTRIQAHLEDHGVRFEARTVNGSKQPVMEIAS 335 Query: 742 -EDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQM---AM 797 + + R+E +++ L + E GHS +A + + Sbjct: 336 VPRELISLFSKRSEGIRTSLTE-------LRQAYEEQHGHSPDRAALIKLAQAATLDTRP 388 Query: 798 DNATLNGLARSGRDVR-----LYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETA 852 D LA R LY+ D R R + ++ I A + A Sbjct: 389 DKEAPKTLAEQATMWRHEAGTLYTEDDLARITG--TRTNTIRPIAAGIDVDAAARRIIDA 446 Query: 853 ISHQKSALHTP--AQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINA 910 +S ++S +A A + S + +++ Sbjct: 447 VSDKRSTWTAQNVMAEANRWAKEYAAEHGPV--PHGTVASVVSRSLGTASVRITPDQVHG 504 Query: 911 QIKRGDLLYVDVAKGYGTG-LLVSRASYEAEKSILR----------HILEGKEAVMPLME 959 + + + T S E E +LR + + AV + Sbjct: 505 RFEALTRNAGTADFNHRTDTRYTSTKILEDENLLLRAGHKDVIPAASMQDFDAAVAAYNQ 564 Query: 960 RVP-GELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERP 1018 V GE L +GQ R +S +V G AG GK++ V +A+ Sbjct: 565 AVATGEKSHPLDTGQIDLAREFATSSKLLSVGIGAAGTGKSSSMGLVRAAITHA----GG 620 Query: 1019 RVVGLGPTHRAVGEMRSA-GVDAQTLASFLHDTQLQQR-------SGETPDFSNTLFLLD 1070 RV+GL P+ A + GV A T FLH + +G T+ ++D Sbjct: 621 RVIGLAPSAVAAANLGGQLGVAAATTDKFLHTNRYPDHDPDRGTAAGPFRVTPGTVVIVD 680 Query: 1071 ESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIV 1130 E+ M G +A ++ AGGG GD QL A+ G RL A ++ I Sbjct: 681 EAGMQGTGKLADVVRVVEAGGGLVRLIGDDRQLSAVQAGGALRLLINEIGAT--ELETIH 738 Query: 1131 RQTPELREAVYSLINRDVE---------RALSGLESVKPSQVPRQEGAWAPEHSVTEFSH 1181 R T A L+ +A +++ V + Sbjct: 739 RFTSPDEAAASLLLRTPTAHEADPFAWYKANGRIQAGNIDTVEGLAFGLWQTRLNQGDAA 798 Query: 1182 SQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNE 1235 A E+ Q+ + +A+ + A V A IVT N+ Sbjct: 799 VMMAPTNESSQRLSERAQAYRIQTGEVAGAGVAVQLRDGSRAWAGDHIVTRSND 852 Score = 72.2 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 44/180 (24%), Positives = 66/180 (36%), Gaps = 20/180 (11%) Query: 1311 DAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYV-------ANSVWT 1363 I E GV + D R GD + +D E +WT Sbjct: 812 SERAQAYRIQTGEVAGAGVAVQLRDGSRAWAGDHIVTRSNDSELKVKRGRDVVKNGDMWT 871 Query: 1364 VTAV-SGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGN 1422 V S+++S +IR E H+ L YA+T H AQG + I + + Sbjct: 872 VEQAHEDGSLSVSHLDHGGKIRLPAEYVSGHVHLGYALTTHRAQGMTRDAGIPILDAATS 931 Query: 1423 RKLMAGFESAYVALSRMKQHVQVYT-----DNRQGWTDAIN-NAVQKGTAHDVFEPKPDR 1476 R E+AYVA +R + ++ +R AI N Q +AH+ + DR Sbjct: 932 R------ENAYVAATRGRDENVLFVAVEEGQDRDTVLAAIAGNHSQDSSAHETLATEYDR 985 Score = 48.7 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 17/90 (18%) Query: 1 MMSIAQVRSAGSAGNYYTDK---------------DNYYVLGSMGERWAGRGAEQLGLQG 45 MMS+ V SAG+ YYT + D Y + G +W G+GA LG+ G Sbjct: 1 MMSLH-VLSAGTGYLYYTQETASGDELRAGDRQLGDYYTLKGLPPGQWLGQGAAALGVTG 59 Query: 46 SVDKDVFTRLL-EGRLPDGADLSRMQDGSN 74 +V + L +GR P+ + + + S Sbjct: 60 NVTEAQMANLFGKGRHPEYEAILQTKTASG 89 >UniRef50_Q9ETQ3 Conjugal transfer protein n=5 Tax=cellular organisms RepID=Q9ETQ3_COREQ Length = 1367 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 137/866 (15%), Positives = 257/866 (29%), Gaps = 141/866 (16%) Query: 78 PGYDLTFSAPKSVSMMAMLGGD---KRLIDAHNQAVDFAVRQVEALASTRVMTDGQSETV 134 GYDL F+ KS+S++ LG + + +AH QAVD A+ +E G + V Sbjct: 128 AGYDLVFTPVKSISLLWGLGDAQVKEAVEEAHKQAVDEALAWIEDEVIYTRRGAGGARKV 187 Query: 135 LTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDKVGKTGFIENVYANQI 194 L++A F+H +R +P LHTH+ + N G+W T+ +Y + Sbjct: 188 KAEGLLIARFDHFDNRVGDPNLHTHSAILNRVLAEGKWTTIDGQV---------LYKANV 238 Query: 195 AFGRLYREKLKEQV-EALGYET-----EVVGKHGMWEMPGVPV---EAFSGRSQTIREAV 245 A Y ++ + V LG VGK ++E+ G+PV E FS R I + Sbjct: 239 AASERYNTRVADLVARKLGVTFAPRPDTAVGKQPVYEVEGIPVGLLEEFS-RRAQIEDRQ 297 Query: 246 GEDA---------------SLKSRDVAALDTRKSKQHV-DPEIKMAEWMQTLKE--TGFD 287 E A A LDTR +K AEW + G D Sbjct: 298 AELAREYKDKYGKNPPKKVQYAQAQQATLDTRNAKNPPRSLAELRAEWRERASAILAGSD 357 Query: 288 IRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGI- 346 D D R P Q VQ+ + F+ + R + Sbjct: 358 PSTLVDEVQSGRDRRPAFYAP--QLPALVQEVTDDLSRKVGSW-TVFSLQAEIQRRLREF 414 Query: 347 -LPPENGVIERARAGIDEAISR------------------------EQLIPLDREKGLFT 381 E V E +D A+ +++ +DR + +T Sbjct: 415 SFAGEMDVNEYVSDAVDLAVRDYCLPTFTEVYDAPESVSERVERGLRRMVDVDRAEMRYT 474 Query: 382 SGIHVLDELSVRALSR---DIMKQNRVTVHPEKSVPRTAGY---SDAVSVLAQ--DRPSL 433 + + E +R + + RV + + AG+ SD ++++ Sbjct: 475 AQAVLDAEEFMRDNAEIDDEHTVAERVIRRQIRRAEKKAGHTLGSDQIAMVEHFLTAKKK 534 Query: 434 AIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQL 493 V+ AG+ + + +V + R+ + ++ + G I Sbjct: 535 VAVAVGAAGAGKTTAATVIARAWEDTNGKVVALGPSARAAEVLGEEISVEGRTIADVLTR 594 Query: 494 LE---GMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSALMAM 550 G ++VD+ S ++ L A V + Q+ + A + Sbjct: 595 ARVGIPTGIDSGDLLLVDEAGMASARDLADLTRIATEAGAVVRLLGDPQQLASVEAGGVL 654 Query: 551 KDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAIL 610 +D +R E + A E+ Sbjct: 655 RD----------LAERTDAPFLEQVHRFKTEGEAEASLLLRSGAGN----ALDWYERR-- 698 Query: 611 TQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYV 670 IR ++ + P MV + + + + Sbjct: 699 -DRIRDGMRHE-----------------------------LPDMVFDAYVADVEADK--- 725 Query: 671 IDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKI------ 724 + + A ++ L R + + + + + A G+ + Sbjct: 726 VALMVAPTNDLVRELNIKAAAYYRANGTVTGPGVVLADGLEAAVGDVVVTRKNNSKYVVK 785 Query: 725 -----PGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPG 779 RV GD V+ + ED + ++ +D ++L Sbjct: 786 DADGQRAGRVKNGDLWTVSEIGEDGSLRLRNNVSDGEVTVAADYITDNVQLGYATTVHRS 845 Query: 780 HSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQ 839 ++ + + M + + R +Y++ DE + R + Sbjct: 846 QGMTVGSCHVLAAANMDRQ-SLYVAMTRGKNTNIVYAANDELPDWDFEHRPDEHPAAIDL 904 Query: 840 IKTRAGETSLETAISHQKSALHTPAQ 865 + + + A Sbjct: 905 LNKIVARDGSQRTVHQMIEDEQRQAA 930 Score = 139 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 102/601 (16%), Positives = 189/601 (31%), Gaps = 132/601 (21%) Query: 903 ELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPL----- 957 + ++ +++RG VDV + ++A +AE+ + + E + Sbjct: 447 DAPESVSERVERGLRRMVDVDR--AEMRYTAQAVLDAEEFMRDNAEIDDEHTVAERVIRR 504 Query: 958 -MERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESE 1016 + R + L S Q A L + V G A + + E Sbjct: 505 QIRRAEKKAGHTLGSDQIAMVEHFLTAKKKVAVAVGAA----GAGKTTAATVIARAWEDT 560 Query: 1017 RPRVVGLGPTHRAVGEM-RSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMV 1075 +VV LGP+ RA + V+ +T+A L ++ +G S L L+DE+ M Sbjct: 561 NGKVVALGPSARAAEVLGEEISVEGRTIADVLTRARVGIPTG---IDSGDLLLVDEAGMA 617 Query: 1076 GNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPE 1135 D+A + G GD QL ++ G R R+ A ++++ R E Sbjct: 618 SARDLADLTRIATEAGAVVRLLGDPQQLASVEAGGVLRDLAERTDAPF--LEQVHRFKTE 675 Query: 1136 LREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAM 1195 L+ AL E + Sbjct: 676 GEAEASLLLRSGAGNALDWYER-----------------------------------RDR 700 Query: 1196 LKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELG 1255 ++ ++P +++A V D EA + L+V N+ R LN G + Sbjct: 701 IRDGMRHELPDMVFDAYVAD-----VEADKVALMVAPTNDLVRELNIKAAAYYRANGTVT 755 Query: 1256 KEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGN 1315 V++ A+ + + + K++ ++DA+G Sbjct: 756 GPGVVL-----ADGLEAAVGD--------------------VVVTRKNNSKYVVKDADGQ 790 Query: 1316 TRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAV-SGDSVTL 1374 R +WTV+ + S+ L Sbjct: 791 ------------------------------------RAGRVKNGDLWTVSEIGEDGSLRL 814 Query: 1375 SDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYV 1434 + E+ + ++ L YA T H +QG + L +R +S YV Sbjct: 815 RNNVSDGEVTVAADYITDNVQLGYATTVHRSQGMTVGSCHVLAAANMDR------QSLYV 868 Query: 1435 ALSRMKQHVQVYTDNRQGWTDAI--NNAVQKGTAHDVFE---PKPDREVMNAERLFSTAR 1489 A++R K VY N + D + + A D+ + + + + R Sbjct: 869 AMTRGKNTNIVYAANDE-LPDWDFEHRPDEHPAAIDLLNKIVARDGSQRTVHQMIEDEQR 927 Query: 1490 E 1490 + Sbjct: 928 Q 928 >UniRef50_A3TJZ6 Transfer protein Tra-like n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TJZ6_9MICO Length = 1920 Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 161/962 (16%), Positives = 274/962 (28%), Gaps = 164/962 (17%) Query: 39 EQLGLQGSVDKDVFTRLLEGRLPDGADLSRMQDGSNRHR----PGYDLTFSAPKSVSMMA 94 E+ ++ V + FT D +++ +R R GYDLTFS KS+S + Sbjct: 148 ERAQIRTQVAVEFFTAEHNRPPADAREVAATIAKRSRQRTTAVAGYDLTFSPVKSISTLW 207 Query: 95 MLGGDK---RLIDAHNQAVDFAVRQVEALA-STRVMTDGQSETVLTGNLVMALFNHDTSR 150 + + ++ AH++AV A+ +E A TR G + +TG V F H SR Sbjct: 208 AVAPREVAAQIELAHHEAVGDALAFIEKHALYTREGARGVRQVDVTG-FVATAFTHRDSR 266 Query: 151 DQEPQLHTHAVVANVTQH-NGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVE 209 +P LHTH VAN Q G+W + ++ + Y +++ + Sbjct: 267 SGDPDLHTHVAVANKVQTLAGKWLAIDG---------RVLFKANVTASETYNTAIEKHLR 317 Query: 210 -ALGYETEVVG-----KHGMWEMPGVPV---EAFSGRSQTIREAVGEDASL--------- 251 LG K + E+ GV E +S R +I+ E A+ Sbjct: 318 TRLGLTFTERACTDRSKRPIREVVGVDPRLNERWSTRRASIQARRSELATAFQSDHGRPP 377 Query: 252 ------KSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLT 305 A L+TR +K + + A A T T Sbjct: 378 TVIESIHLAQQATLETRDAKHEPRTLTEQRTTWAREAQVVLGGPDAVTAMVTAALSSTTT 437 Query: 306 PGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGID--- 362 P D V+ + + L + + V A + + E+ A +D Sbjct: 438 PATPGVDAAWVRSTASTILDTLQGGRSTWQVWHVRAEAQREVRAVDLPPEQVEAVVDLLV 497 Query: 363 --------EAISREQLIPLDRE---------------KGLFTSGIHVLDELSVRALSRDI 399 I+R Q ++ E LFT+ + E + + Sbjct: 498 GEVLTARSVRITRPQDDVVEPEELRRRDGSSVYEAAGSALFTAAAILAAEQRLVETAGRC 557 Query: 400 MKQN--------RVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAE 451 + + V AG + V +A L + G G+ + Sbjct: 558 DGRRAGEDAVAIALLEQAANRVTLNAGQTALVRGMATSGARLQLAIAPAG-TGKTTAMQA 616 Query: 452 LVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFT-------PGST 504 L E G V +A + +++ + + + G+ Sbjct: 617 LAAAWAEDGGTVIGLAPSAAAAAVLREQLGAGTDTLAKLTWSIADHDLPDWAENIGAGTL 676 Query: 505 VIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMKDAGVNTYRWQGGE 564 V+VD+ +D V + Q+ A ++D G Sbjct: 677 VMVDEAGMADTLSLAAAVDFVVGRGGSVRLIGDDQQLAAIGAGGVLRD-----IVATHGA 731 Query: 565 QRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVL 624 + ++ D A LA G E L Sbjct: 732 LHLSELMRFVDPAEGAASLALR---------------DGHPEALGF------------YL 764 Query: 625 GLPEVTMTALSPVW---LDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSL 681 + + L+ V + +R + M+ + + R R+ + Sbjct: 765 DRDRIHVGDLAVVTHDVFTAWARDRGNGLDSIMLAPTRELVSELNQRAQAHRLNNTNSGA 824 Query: 682 TLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLR------VSGGDRL 735 +R A G T V GE++ LR V GDR Sbjct: 825 GVRLADGNTAYV---------------------GEQVITRTNERRLRVSATDWVKNGDRW 863 Query: 736 QVASVS-EDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQ 794 V + + ++ V TLP + E G+ T + SA + Sbjct: 864 TVLAAGVDGSLRVRHARHGRVITLP---RTYVTGATELGYATTVHGAQGVSADTMHGLAT 920 Query: 795 MAMDNATLNGL---ARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLET 851 L + R + L D A P I G + + Sbjct: 921 GTESRQQLYTMLTRGRHANHLHLQVVGDGDPHA---VIRPENLHPQTAIDLLQGILARDN 977 Query: 852 AISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQ 911 + + L A A LA VD L A + L + Sbjct: 978 SPISASTMLREQADPATRLA-------DATARYVDALHVAAEHHLGRSTIAGLDAGADRV 1030 Query: 912 IK 913 + Sbjct: 1031 VD 1032 Score = 112 bits (279), Expect = 2e-22, Method: Composition-based stats. Identities = 64/329 (19%), Positives = 109/329 (33%), Gaps = 20/329 (6%) Query: 927 GTGLLVSRASYEAEKSILRHI------LEGKEAVM-PLMERVPGELMEKLTSGQRAATRM 979 G+ L + A AE+ ++ G++AV L+E+ + L +GQ A R Sbjct: 534 GSALFTAAAILAAEQRLVETAGRCDGRRAGEDAVAIALLEQAANRV--TLNAGQTALVRG 591 Query: 980 ILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA-GV 1038 + + R + AG GKTT M A+ + V+GL P+ A +R G Sbjct: 592 MATSGARLQLAIAPAGTGKTTA----MQALAAAWAEDGGTVIGLAPSAAAAAVLREQLGA 647 Query: 1039 DAQTLASFLHDTQLQQRSGETPDF-SNTLFLLDESSMVGNTDMARAYALIAAGGGRAVAS 1097 TLA + + TL ++DE+ M +A A + GG Sbjct: 648 GTDTLAKLTWSIADHDLPDWAENIGAGTLVMVDEAGMADTLSLAAAVDFVVGRGGSVRLI 707 Query: 1098 GDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGL-- 1155 GD QL AI G R A + E++R A + AL Sbjct: 708 GDDQQLAAIGAGGVLRDIVATHGA--LHLSELMRFVDPAEGAASLALRDGHPEALGFYLD 765 Query: 1156 -ESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVR 1214 + + + + + LA ++ + + + Sbjct: 766 RDRIHVGDLAVVTHDVFTAWARDRGNGLDSIMLAPTRELVSELNQRAQAHRLNNTNSGAG 825 Query: 1215 DYTGRTPEAREQTLIVTHLNEDRRVLNSM 1243 A ++T NE R +++ Sbjct: 826 VRLADGNTAYVGEQVITRTNERRLRVSAT 854 Score = 56.4 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 39/158 (24%), Positives = 61/158 (38%), Gaps = 16/158 (10%) Query: 1326 AEGVTLYTPDTIRVGTGDR-MRFTKSDRERGYVANSVWTVTAVS-GDSVTLSDGQQTREI 1383 A+G T Y + + T +R +R + +D WTV A S+ + + R I Sbjct: 829 ADGNTAYVGEQVITRTNERRLRVSATDW---VKNGDRWTVLAAGVDGSLRVRHARHGRVI 885 Query: 1384 RPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQ-- 1441 + +L YA T HGAQG S L +R+ + Y L+R + Sbjct: 886 TLPRTYVTGATELGYATTVHGAQGVSADTMHGLATGTESRQQL------YTMLTRGRHAN 939 Query: 1442 --HVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDRE 1477 H+QV D N + TA D+ + R+ Sbjct: 940 HLHLQVVGDGDPHAVIRPEN-LHPQTAIDLLQGILARD 976 >UniRef50_C7NLP0 TrwC relaxase n=9 Tax=Actinomycetales RepID=C7NLP0_KYTSD Length = 1184 Score = 207 bits (527), Expect = 3e-51, Method: Composition-based stats. Identities = 193/1151 (16%), Positives = 341/1151 (29%), Gaps = 211/1151 (18%) Query: 22 NYYVLGSMGERWAGRGAEQLG-----LQGSVDKDVFTRLLE-GRLPDGADLSRM------ 69 Y G+ +W G G LG + V + L+ GR P D Sbjct: 38 YYLEAGTPRGQWLGSGVASLGKGQLAVGNRVSEAQLQLLMGMGRDPITGDPLGHAFPAYR 97 Query: 70 ----------------------------------QDGSNRHRPGYDLTFSAPKSVSMMAM 95 + G R G+D TFS PKS S + Sbjct: 98 SVSEKIEARIVDLDPDLSPGVKGEAVARIEAEESERGRRRAVAGFDFTFSVPKSASALWA 157 Query: 96 LGGDKR---LIDAHNQAVDFAVRQVE-ALASTRVM---TDGQSETVLTGNLVMALFNHDT 148 + + +AH+ AV V +E +A+TR DG V V F+H Sbjct: 158 VADAGTQALIGEAHHAAVAEVVAFMEREVAATRTGATAGDGAVAQVDVTGFVATAFDHFD 217 Query: 149 SRDQEPQLHTHAVVANVTQH--NGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKE 206 SR +P LHTH V++N Q +G+W++L + +A L+ + Sbjct: 218 SRAGDPHLHTHVVISNKVQTAFDGKWRSLDGRPMHAAV---------VALSELHEAVFAD 268 Query: 207 QV-EALGYETEV----VGKHGMWEMPGVPVE---AFSGRSQTIREAVGEDASLKSRDVAA 258 + G E E ++ W + VP E FS R++ I K+R +A Sbjct: 269 HMTRTFGVEWEARDMGRDRNPAWAISTVPEELVQEFSTRARHIDAE-------KNRLIAE 321 Query: 259 LDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQ 318 R +Q I TL +A R AD +D RT G QD + Sbjct: 322 YVARHGRQPSTATIIKLRAQATLATR--PEKAVRSLADLTSDWRTRATGVLGQDATGWAR 379 Query: 319 AVTQ-----------------------AIAGLSERKVQFTYTDVLARTVGILPP-ENGVI 354 +T + + E++ + +++A + Sbjct: 380 TITDNDQPLLLRADDVPLDAIGELGQTVVEVVGEKRSTWRRWNLMAEASRQTMGWRFATM 439 Query: 355 ERARAGIDEAISREQLIPLD------------------------REKGLFTSGIHVLDEL 390 A + + L + +F+S + + E Sbjct: 440 HDREAVVAMVADAAEQASLRLTPPDLATSPATFRRGDGTSVFRPKHSTVFSSELLLAAEE 499 Query: 391 SVRALSRDIMK--------QNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGA 442 + SR + + + +D + +A L ++ G G Sbjct: 500 RLLDRSRTLTAPTVPVTTVEKITNKPDHEGRMLGEDQTDVLMKIAVSGRMLDVLVGPAG- 558 Query: 443 AGQRERVAELVMM--AREQGREVQIIAADRRSQMNMKQDERLSGELITG--RRQLLEGMA 498 AG+ ++ L V +A + + D + E + L++G Sbjct: 559 AGKTTAMSALRRAWEKEHGSGSVVGLAPSAVAAQVLADDLGIRCENTAKWWQNHLIDGTD 618 Query: 499 FTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSG---QRTGTGSALMA------ 549 F G VI+D+ + A R +VL+ Q G A Sbjct: 619 FEAGQLVIIDEASLAGTLSLDRITHLAERAGAKVLLVGDYGQLQSVDAGGAFGLLVGDRN 678 Query: 550 ----MKDAGVNTYRWQGG------EQRPATIISEPDRNVRYARLAGDFAASVKAGEE--- 596 + D T+ W+ R I + D + + A + Sbjct: 679 EAPELVDVHRFTHEWEKTASLALRHGRTQVIDTYLDHDRIHEGEAEAMTDAAYTAWRTDR 738 Query: 597 -----SVAQVSGVREQAILTQAIRSELKTQGVLG-LPEVTMTALSPVWL--DSRSRYLRD 648 SV + + L Q R++L G L EV +T + + +R Sbjct: 739 DRGLVSVLVAETRDDVSALNQRARADLILDGTLTPGQEVELTDGTTAGIGDTIITRRNDR 798 Query: 649 MYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGE---------TQVVRISSLD 699 R G R+ D + I V S+T+R T V L Sbjct: 799 RLRNG------KDWVRNGDTWTITGV-RDDGSVTIRKTGRRFGGTIVLPTTYVADHVDLG 851 Query: 700 SSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLP 759 + + R + + V + V + R + + S A ++ P Sbjct: 852 YAITAHRAQGVTV---DTAHVLVEPTTTRENFYVAMTRGKHSNRAYVILDRADEHAYPHP 908 Query: 760 VSDSPFTALKLENGWVETPGHSVSDSATVFA------SVTQMAMDNATLNGLARSGRDVR 813 + TA + G ++ G +S T+ A S+ Q+A + T+ A+ R Sbjct: 909 GDNPDATAHSVLYGVLQHVGAELSAHETITAEQERWGSIAQLAAEYETIAAAAQHDRWAI 968 Query: 814 LY--SSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSAL----HTPAQQA 867 L + L + + + +E + A L+T + +A Sbjct: 969 LIRNAGLTAEQADATIESEAFGALTAELRRAEANHHDLDTLLPRLVTARGFADADDIASV 1028 Query: 868 IHLALPVVESKKLAFSMVD---LLTEAKSFAAEGTGFTELGGEINAQ----IKRGDLLYV 920 +H + ++ L +A+G ++ ++ + R D + + Sbjct: 1029 LHYRVARATARPAGSGRTHKAPRLIAGLIPSADGPMTDDMRQALDERRELIEARADAV-L 1087 Query: 921 DVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMI 980 D A+ G + V +R L A + I Sbjct: 1088 DTARDAGEAWTRPLGDPPRDPRKTAAWRRHARTVAAYRDRYGITDDTPLGPAPENAAQKI 1147 Query: 981 LETSDRFTVVQ 991 R +V+ Sbjct: 1148 DAARARSALVR 1158 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 68/394 (17%), Positives = 117/394 (29%), Gaps = 56/394 (14%) Query: 958 MERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESER 1017 + P L Q I + V+ G AG GKTT A+ A E Sbjct: 521 ITNKPDHEGRMLGEDQTDVLMKIAVSGRMLDVLVGPAGAGKTTAMSALRRAWEK--EHGS 578 Query: 1018 PRVVGLGPTHRAVGEMRSA-GVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVG 1076 VVGL P+ A + G+ + A + + + E + L ++DE+S+ G Sbjct: 579 GSVVGLAPSAVAAQVLADDLGIRCENTAKWWQNHLIDGTDFE----AGQLVIIDEASLAG 634 Query: 1077 NTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPEL 1136 + R L G + + GD QLQ++ G F L + + ++ R T E Sbjct: 635 TLSLDRITHLAERAGAKVLLVGDYGQLQSVDAGGAFGLLVGDRN-EAPELVDVHRFTHEW 693 Query: 1137 REAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAML 1196 + + + + + E + A Sbjct: 694 EKTASLALRHGRTQVIDTY---------------------LDHDRIHEGEAEAMTDAAYT 732 Query: 1197 KGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGK 1256 D + +++V +D LN G L Sbjct: 733 AWRTDRDRGLV-------------------SVLVAETRDDVSALNQRARADLILDGTLTP 773 Query: 1257 EQ---VMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAE 1313 Q + R +D + + I G+ +DDG +T++ Sbjct: 774 GQEVELTDGTTAGIGDTIITRRNDRRLRNGKDWVR--NGDTWTITGV-RDDGSVTIRKTG 830 Query: 1314 GN--TRLISPREAVAEGVTLYTPDTIRVGTGDRM 1345 ++ P VA+ V L T G + Sbjct: 831 RRFGGTIVLPTTYVADHVDLGYAITAHRAQGVTV 864 Score = 74.5 bits (181), Expect = 3e-11, Method: Composition-based stats. Identities = 70/429 (16%), Positives = 125/429 (29%), Gaps = 63/429 (14%) Query: 1071 ESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIV 1130 E M+G + +G V G G+ M + Sbjct: 528 EGRMLGEDQTDVLMKIAVSGRMLDVLVG------PAGAGK------------TTAMSALR 569 Query: 1131 RQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEA 1190 R +E + A++ + + A ++ + + + + +L Sbjct: 570 R--AWEKEHGSGSVVGLAPSAVAAQVLADDLGIRCENTAKWWQNHLIDGTDFEAGQLVII 627 Query: 1191 QQKAMLKGEAFPDVPMTLYEA-----IVRDYTGR-TPEAREQTLIVTHLNEDRRVLNSMI 1244 + ++ + + A +V DY + +A ++ + L + Sbjct: 628 DEASLAGTLSLDRITHLAERAGAKVLLVGDYGQLQSVDAGGAFGLLVGDRNEAPELVDVH 687 Query: 1245 H--DVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISK 1302 EK L V++T L H + + + + Sbjct: 688 RFTHEWEKTASLALRHGRTQVIDT---------YLDHDRIHEGEAEAMTDAAYTAWRTDR 738 Query: 1303 DDGLITLQDAEGNTRLISPREAVAEGV----------TLYTPDTIRVGTGDRMRFTKSDR 1352 D GL+++ AE + + + + + D G GD + ++DR Sbjct: 739 DRGLVSVLVAETRDDVSALNQRARADLILDGTLTPGQEVELTDGTTAGIGDTIITRRNDR 798 Query: 1353 ERG-----YVANSVWTVTAVSGDSVTLSDGQQTR---EIRPGQEQAEQHIDLAYAITAHG 1404 WT+T V D R I H+DL YAITAH Sbjct: 799 RLRNGKDWVRNGDTWTITGVRDDGSVTIRKTGRRFGGTIVLPTTYVADHVDLGYAITAHR 858 Query: 1405 AQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYT--DNRQGWTDAINNAVQ 1462 AQG + A L + E+ YVA++R K + Y D Sbjct: 859 AQGVTVDTAHVLV------EPTTTRENFYVAMTRGKHSNRAYVILDRADEHAYPHPGDNP 912 Query: 1463 KGTAHDVFE 1471 TAH V Sbjct: 913 DATAHSVLY 921 >UniRef50_B7L3A3 Ti-type conjugative transfer relaxase TraA n=2 Tax=Methylobacterium extorquens group RepID=B7L3A3_METC4 Length = 1245 Score = 207 bits (525), Expect = 5e-51, Method: Composition-based stats. Identities = 109/541 (20%), Positives = 188/541 (34%), Gaps = 67/541 (12%) Query: 805 LARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPA 864 LA++G D+R+ + + P+ + + AG + + +K A Sbjct: 206 LAKAGLDLRI---DHRSHIEAGIRIEPTEHIGVHAVN-MAGLGKVSDRVEAEKQKRLRNA 261 Query: 865 QQAIH---LALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEIN---AQIKRGDLL 918 Q I LP++ +K F D+ + + F + + + + + Sbjct: 262 QAIIDDPETLLPILSREKSVFDERDIARAVFRYIDDPAAFEAVRLRLGQSPELVAVAEEV 321 Query: 919 YVDVAKGYGTG-LLVSRASYEAEKSIL----RHILEGKEAVMPLMERVPGELMEKLTSGQ 973 + + +RA EAE + R + V +L+ Q Sbjct: 322 FDTESGRVVARARWTTRALLEAEVRMQAATGRLFADTSHRVPDRARDRAFAARPELSEEQ 381 Query: 974 RAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM 1033 R A R + + R V G+AG GK+T +A + RVVG +A + Sbjct: 382 REAVRHV-TGAARIAAVVGFAGAGKSTMLGVARAAWSDC----GHRVVGGALAGKAAEGL 436 Query: 1034 RS-AGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGG 1092 S AG+ ++TLAS+ +L ++ S +F+LDE+ MV + ++R + G Sbjct: 437 ESSAGIASRTLASW----ELAWKNDRDLLKSGDVFVLDEAGMVASEQLSRIVREVERRGA 492 Query: 1093 RAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQT-PELREAVYSLINRDVERA 1151 + V GD QLQ I G FR A + EI RQ P +R A + + A Sbjct: 493 KLVLVGDAMQLQPIEAGAGFRAIIE--IIGYAELAEIWRQADPAMRRASVAFARGETAAA 550 Query: 1152 LSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEA 1211 L ++ + L A Sbjct: 551 LGVYR----------------------------------ERGMVRFTPDRAAARAALIAA 576 Query: 1212 IVRDYTGRTPEAR-EQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIR 1270 DY G P+ R +TLI+ N D LN+M D + G L E V Sbjct: 577 WKPDYLGHKPDGRPSETLILAQTNADVLALNAMARDTLKADGLLSGEARFVTERGERMFA 636 Query: 1271 DGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITL-QDAEGNTRLISPREAVAEGV 1329 G+ + + AL + + + + + ++ L +D G+ I R + + Sbjct: 637 PGDRV---LFLENDRALGVKNGMLATVETAASGRLMVRLDRDGTGDGARIEVRAELYRNL 693 Query: 1330 T 1330 Sbjct: 694 D 694 Score = 92.6 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 42/193 (21%), Positives = 73/193 (37%), Gaps = 18/193 (9%) Query: 1333 TPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLS---DGQQTREIRPGQEQ 1389 GDR+ F ++DR G + TV + + + DG + + Sbjct: 629 ERGERMFAPGDRVLFLENDRALGVKNGMLATVETAASGRLMVRLDRDGTGDGARIEVRAE 688 Query: 1390 AEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDN 1449 +++D YA T H +QGA+ L +R L AYVA++R + V ++ + Sbjct: 689 LYRNLDHGYAATVHKSQGATLDRVHVLATPGMDRHL------AYVAMTRHRHAVVLHGAH 742 Query: 1450 RQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVA----AGRAVLRQAG 1505 + + + K AH+ + A + R+ + AG A R+A Sbjct: 743 EDFISPSRRAKLGKAPAHEALD-----TAALAGMAWRLGRDGAKASTLDFAGDAAFREAA 797 Query: 1506 LAGGDSPARFIAP 1518 + AR IA Sbjct: 798 VDLSSLDARRIAR 810 Score = 90.3 bits (222), Expect = 7e-16, Method: Composition-based stats. Identities = 72/515 (13%), Positives = 154/515 (29%), Gaps = 66/515 (12%) Query: 327 LSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDRE---------- 376 LS K F D+ AR V + E R + + +L+ + E Sbjct: 275 LSREKSVFDERDI-ARAVFRYIDDPAAFEAVRLRLGQ---SPELVAVAEEVFDTESGRVV 330 Query: 377 -KGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSV-------PRTAGYSDAVSVLAQ 428 + +T+ + E+ ++A + + V + +AV + Sbjct: 331 ARARWTTRALLEAEVRMQAATGRLFADTSHRVPDRARDRAFAARPELSEEQREAVRHV-T 389 Query: 429 DRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELIT 488 +A V G G AG+ + + G V A ++ ++ ++ + Sbjct: 390 GAARIAAVVGFAG-AGKSTMLGVARAAWSDCGHRVVGGALAGKAAEGLESSAGIASRTLA 448 Query: 489 G--RRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSA 546 + G ++D+ ++ ++ ++ R ++++ + A Sbjct: 449 SWELAWKNDRDLLKSGDVFVLDEAGMVASEQLSRIVREVERRGAKLVLVGDAMQLQPIEA 508 Query: 547 LMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVRE 606 AG G A I + D +R A +A A E+ A + RE Sbjct: 509 -----GAGFRAIIEIIGYAELAEIWRQADPAMRRASVA-------FARGETAAALGVYRE 556 Query: 607 QAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSH 666 + M +P + L ++P + P+ R Sbjct: 557 RG----------------------MVRFTP-DRAAARAALIAAWKPDYL--GHKPDGRPS 591 Query: 667 DRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPG 726 + ++ + A L L +T + + + A G+R+ Sbjct: 592 ETLILAQTNAD--VLALNAMARDTLKADGLLSGEARFVTERGERMFAPGDRVLFLENDRA 649 Query: 727 LRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDS- 785 L V G V + + + V + + L++G+ T S + Sbjct: 650 LGVKNGMLATVETAASGRLMVRLDRDGTGDGARIEVRAELYRNLDHGYAATVHKSQGATL 709 Query: 786 ATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDE 820 V T + + R V L+ + ++ Sbjct: 710 DRVHVLATPGMDRHLAYVAMTRHRHAVVLHGAHED 744 >UniRef50_D1N4L7 Conjugative relaxase domain protein n=2 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N4L7_9BACT Length = 295 Score = 205 bits (522), Expect = 1e-50, Method: Composition-based stats. Identities = 84/289 (29%), Positives = 136/289 (47%), Gaps = 36/289 (12%) Query: 1 MMSIAQVRSAGSAG-----NYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSV-DKDVFTR 54 M ++ ++R+ +G N+ + D Y + W G A+ GL+ V + F+ Sbjct: 1 MFNMTKIRATNGSGKSFYANHLSSNDYYSEHEKVQGYWRGELADTFGLRDKVVTSEEFSL 60 Query: 55 LLEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAV 114 P ++ R +D +APKSVS+M+M D+RL++AH ++V A+ Sbjct: 61 FQRNVNPKTPGKLTQKNMPGGPR-FFDFQVAAPKSVSVMSMF--DERLVEAHRESVRIAM 117 Query: 115 RQVEALASTRVMTDGQSET---VLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH-NG 170 ++E LA+ RV T TG LV A F HDTSR +PQLHTH VV NVT+ +G Sbjct: 118 AELERLAAVRVRDGENVRTNNYETTGKLVYAEFMHDTSRALDPQLHTHNVVCNVTRAGDG 177 Query: 171 EWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYET-EVVGKHGM---WEM 226 +K L + ++ + G++Y ++ + LGYET E + G +++ Sbjct: 178 RYKALETLEMCRAI---------RYAGKVYHNEMAARCRELGYETVETRDRKGNVIWYDL 228 Query: 227 PGVP---VEAFSGRSQTIREA-------VGEDASLKSRDVAALDTRKSK 265 VP +E FS R + I +A G +L + + TR +K Sbjct: 229 ACVPADVMERFSKRRRQIEKAEAEFIAEHGRKPTLSENNYLSTSTRTNK 277 >UniRef50_B2I3X4 TrwC protein n=1 Tax=Acinetobacter baumannii ACICU RepID=B2I3X4_ACIBC Length = 378 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 69/379 (18%), Positives = 150/379 (39%), Gaps = 40/379 (10%) Query: 1126 MKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEA 1185 M V++ EL++ V ++ ++ E + S + + + E + + Sbjct: 1 MTLSVKKNQELKDVVSVVVAKNKEG------KIDLSNNDKAFDLLDKQQRIHEVVVAAKG 54 Query: 1186 KLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIH 1245 Q A+ + +++ +V DY E+R+ +LI+T N DR +LNS++ Sbjct: 55 -----TQPALHEQHDLFQEIHEVHQKLVGDYMRLNKESRDNSLIITPFNSDRVMLNSLVR 109 Query: 1246 DVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETH-----------RDALVLVDNVY 1294 +K EL +L N + E + ++ +E + +D + ++ Sbjct: 110 SEMKKLNELDHNDHNFEILVNTNFTEAERKHINNYEPNMTIRFGKSFTDKDTGIKIEKGD 169 Query: 1295 HRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRER 1354 + + +G + L D + N +P++ V +Y + ++ GD +R T++ + Sbjct: 170 YLKVMMKDKEGKLVLIDKDKNKIKWNPKKGS---VEVYKSEQRKIAKGDVIRITRTKDDE 226 Query: 1355 GYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAI 1414 + + + D V + Q + + +H D Y+ T + +QG ++ Sbjct: 227 QIKNGERYKIKDIHEDKVIVE--GQDGKEKSLSRSGFKHFDYGYSSTVYSSQGLTQGNVF 284 Query: 1415 ALEGTEGNR-------------KLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAV 1461 L ++ G S YVA++R + ++Q+YTDN+Q +AI Sbjct: 285 LLLNSQKLANDLKSDKAATKVLGNTFGTRSFYVAVTREEHNLQIYTDNKQMTREAITFKQ 344 Query: 1462 QKGTAHDVFEPKPDREVMN 1480 K + D + + + Sbjct: 345 DKTSYLDTVKEVGQKVPEH 363 Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats. Identities = 39/269 (14%), Positives = 91/269 (33%), Gaps = 35/269 (13%) Query: 580 YARLAGDFAASVKAGEESVAQVSG-VREQAILTQAIRSELKTQGVLGLPEVTMTALSPVW 638 + +L GD+ K ++ ++ ++ +L +RSE+K L + L Sbjct: 73 HQKLVGDYMRLNKESRDNSLIITPFNSDRVMLNSLVRSEMKKLNELDHNDHNFEILVNTN 132 Query: 639 LDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSL 698 R + Y P M + T I++ + ++D +G+ ++ Sbjct: 133 FTEAERKHINNYEPNMTIRFGKSFTDKDTGIKIEK--GDYLKVMMKDKEGKLVLIDKDKN 190 Query: 699 DSSW-------SLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPG 751 W +++ E+ +A G+ +R+T ++ G+R ++ + ED + V Sbjct: 191 KIKWNPKKGSVEVYKSEQRKIAKGDVIRITRTKDDEQIKNGERYKIKDIHEDKVIVEGQD 250 Query: 752 RAEPATLPVSDSPFTALKLENGWVETPGHSV-SDSATVFASVTQMAMDN----------- 799 E + + G+ T S VF + + N Sbjct: 251 GKEKSLSRSGFK-----HFDYGYSSTVYSSQGLTQGNVFLLLNSQKLANDLKSDKAATKV 305 Query: 800 --------ATLNGLARSGRDVRLYSSLDE 820 + + R ++++Y+ + Sbjct: 306 LGNTFGTRSFYVAVTREEHNLQIYTDNKQ 334 >UniRef50_A1RCJ6 Toprim domain n=5 Tax=Actinomycetales RepID=A1RCJ6_ARTAT Length = 2109 Score = 202 bits (514), Expect = 9e-50, Method: Composition-based stats. Identities = 159/997 (15%), Positives = 286/997 (28%), Gaps = 181/997 (18%) Query: 40 QLGLQGSVDKDVFTRLLEGRLP-----DGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMA 94 + ++ + + F R GR P GA +++ GYDLTF+ KSVS + Sbjct: 275 RAKIRTELGNEHFLR-EHGRAPIDDRERGAFMAKATRQQTTAVAGYDLTFAPVKSVSTLW 333 Query: 95 MLGG---DKRLIDAHNQAVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRD 151 L K + AH+ AV+ ++ +E G + V L+ +F H +R Sbjct: 334 ALADRDVAKEIEAAHHAAVEATLKWLEKEVLFTRRGRGGLQQVKAKGLIAGMFTHRDARS 393 Query: 152 QEPQLHTHAVVANVTQHN-GEWKTLSSDKVGKTGF-IENVYANQIAFGRLYREKLKEQVE 209 +P LHTH V+N Q G W + + K + +Y I + R ++ + Sbjct: 394 SDPHLHTHVAVSNKVQDETGRWLAVDGRVLYKANVTLAEMYNTLIESELIARLGVRFENR 453 Query: 210 ALGYETEVVGKHGMWEMPGVPVEA---FSGRSQTIREAVGEDASL--------------- 251 G + V K + E+ GV +S R I E A+ Sbjct: 454 RSGL-NKGVDKRPVREIVGVDERLAKSWSKRHSAIEARRRELAAAFQAEHGRPPTEGEAV 512 Query: 252 KSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQ 311 + A TR++K E + L E I + + D D P Sbjct: 513 TLAEKAWDQTRQAKHAPRAEA--DQRAAWLAEAAAIIGSEQAVRDMVEDCLGHRPDAQDV 570 Query: 312 DGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDE----AISR 367 V + Q +A ++E + + + A + +D AI Sbjct: 571 TDQWVAETAQQVVARVAEDRATWQVWHLRAEAQRQARAHGIRLTELDDAVDRVVATAIRE 630 Query: 368 EQLI-----PLDRE--------------------------------------KGLFTSGI 384 + PL RE +TS Sbjct: 631 HSIAFNDPDPLTRETTAAEQDVTIPAPLQRTDRPAEGGVDAEEVVSAYSLAGARQYTSRA 690 Query: 385 HVLDELSVRALSRDIMKQNRVTVH--------PEKSVPRTAGYSDAVSVLAQDRPSLAIV 436 + E + +R + V + A V +A ++ + Sbjct: 691 VIEAERRIVESARHTGGRTISEVRVGIAIAEAAANELQLNAAQQSLVREMATSGRAVQLA 750 Query: 437 SGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSG---ELITGRRQL 493 G G+ + L ++ G V +A + + L + L Sbjct: 751 LAPAG-TGKTTAMQVLTRAWQDSGGTVIGLAPSAVAAQELGASINLENPDTNTAGTSKNL 809 Query: 494 LEGM------------------------------AFTPGSTVIVDQGEKLSLKETLTLLD 523 L G + V++D+ + + +D Sbjct: 810 LNGPWRPGRKKVRADTLAKLVWHAKHGDAPAWMEKINSKTLVLIDEAGMAATTDLAAAID 869 Query: 524 GAARHNVQVLITDSGQRTGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARL 583 QV + ++ + +A ++D ++ PD ++ +A Sbjct: 870 YITSRGGQVRLVGDDRQLASVAAGGVLRD---IAHQIGAVTLSEVHRFRNPDGSLNHAEA 926 Query: 584 AGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRS 643 A A ++ G+ S R + + G LG A D Sbjct: 927 AATLA--LRDGDPSAIAFYADRGRIHV-----------GDLGACADQAYAAWAA--DRAD 971 Query: 644 RYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWS 703 + P + +DR LTL D Sbjct: 972 GTDSVLIAPTRDLVAELNTRARNDRLAGQPDKEIGRVLTLADGT---------------- 1015 Query: 704 LFRPEKMPVADGERLRVTGKIPGLR------VSGGDRLQVASV-SEDAMTVVVPGRAEPA 756 V+ G+R+ LR V GDR V +V ++ ++TV+ + Sbjct: 1016 -------KVSAGDRIITRENDRRLRISRTNWVKNGDRWHVKNVNTDGSLTVIHDKLGKTI 1068 Query: 757 TLPVSDSPFTALKLENGWVETPGHSVS-DSATVFASVTQMAMDNATLNGLARSGRDVRLY 815 TLP + + ++ G+ T + + T +T N L+R LY Sbjct: 1069 TLPAD---YVSKTVQLGYATTVHGAQGITTGTCHVVLTGDEDRNLLYVALSRGKFANHLY 1125 Query: 816 SSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVV 875 ++ L R P + + + + +AL P Sbjct: 1126 LNVASDGDPHNLIR-PEALIPPTALDRITEMLRRDGSPVSATTALRDQTN-------PHQ 1177 Query: 876 ESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQI 912 +A D +T G ++ A + Sbjct: 1178 LLGDMAARYHDAVTAGAENLIGPVGMDKIDAHAEALL 1214 Score = 132 bits (332), Expect = 1e-28, Method: Composition-based stats. Identities = 106/671 (15%), Positives = 192/671 (28%), Gaps = 88/671 (13%) Query: 712 VADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLE 771 V ERL + + R A+ + G A D A + Sbjct: 470 VGVDERLAKSWSKRHSAIEARRRELAAAFQAEHGRPPTEGEAVTLAEKAWDQTRQA---K 526 Query: 772 NGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHP 831 + + A A + + D + + TA+++ Sbjct: 527 HAPRAEADQRAAWLAEAAAIIGSEQAVRDMVEDCLGHRPDAQDVTDQWVAETAQQVVARV 586 Query: 832 SFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPV-VESKKLAFSMVDLLTE 890 + + Q+ E + T A+ + + +AF+ D LT Sbjct: 587 AEDRATWQVWHLRAEAQRQA---RAHGIRLTELDDAVDRVVATAIREHSIAFNDPDPLTR 643 Query: 891 AKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGY--GTGLLVSRASYEAEKSILRHIL 948 + A + + + G V+ G SRA EAE+ I+ Sbjct: 644 ETTAAEQDVTIPAPLQRTDRPAEGGVDAEEVVSAYSLAGARQYTSRAVIEAERRIVESAR 703 Query: 949 EGKEAVMPLME-----RVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFR 1003 + + +L + Q++ R + + + AG GKTT Sbjct: 704 HTGGRTISEVRVGIAIAEAAANELQLNAAQQSLVREMATSGRAVQLALAPAGTGKTTAM- 762 Query: 1004 AVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA--------------------------- 1036 + + V+GL P+ A E+ ++ Sbjct: 763 ---QVLTRAWQDSGGTVIGLAPSAVAAQELGASINLENPDTNTAGTSKNLLNGPWRPGRK 819 Query: 1037 GVDAQTLASFL-HDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAV 1095 V A TLA + H + S TL L+DE+ M TD+A A I + GG+ Sbjct: 820 KVRADTLAKLVWHAKHGDAPAWMEKINSKTLVLIDEAGMAATTDLAAAIDYITSRGGQVR 879 Query: 1096 ASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGL 1155 GD QL ++A G R + A + E+ R Sbjct: 880 LVGDDRQLASVAAGGVLRDIAHQIGA--VTLSEVHR------------------------ 913 Query: 1156 ESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRD 1215 + P A + + +A + + Y A Sbjct: 914 -----FRNPDGSLNHAEAAATLALRDGDPSAIAFYADRGRIHVGDLGACADQAYAA---- 964 Query: 1216 YTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELR 1275 ++++ + LN+ + R G+ KE V L R Sbjct: 965 -WAADRADGTDSVLIAPTRDLVAELNTRARNDRLA-GQPDKEIGRVLTLADGTKVSAGDR 1022 Query: 1276 RLSTWETHRDALV----LVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTL 1331 ++ R + + + + ++ D L + D G T + P + V++ V L Sbjct: 1023 IITRENDRRLRISRTNWVKNGDRWHVKNVNTDGSLTVIHDKLGKTITL-PADYVSKTVQL 1081 Query: 1332 YTPDTIRVGTG 1342 T+ G Sbjct: 1082 GYATTVHGAQG 1092 Score = 68.3 bits (165), Expect = 3e-09, Method: Composition-based stats. Identities = 95/479 (19%), Positives = 158/479 (32%), Gaps = 60/479 (12%) Query: 1300 ISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGY--- 1356 I+ L+ + ++ + G L D +V GDR+ ++DR Sbjct: 978 IAPTRDLVAELNTRARNDRLAGQPDKEIGRVLTLADGTKVSAGDRIITRENDRRLRISRT 1037 Query: 1357 ---VANSVWTVTAVSGD-SVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETF 1412 W V V+ D S+T+ + + I + + + L YA T HGAQG + Sbjct: 1038 NWVKNGDRWHVKNVNTDGSLTVIHDKLGKTITLPADYVSKTVQLGYATTVHGAQGITTGT 1097 Query: 1413 AIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEP 1472 + + +R L+ YVALSR K +Y + ++ H++ P Sbjct: 1098 CHVVLTGDEDRNLL------YVALSRGKFANHLY-------LNVASDGDP----HNLIRP 1140 Query: 1473 KPDREVMNAERLFSTARELRDVAAGRAVLRQA---GLAGGDSPARFIAPGRKYPQPYVAL 1529 + +R+ R + LR GD AR+ + + Sbjct: 1141 EALIPPTALDRITEMLRRDGSPVSATTALRDQTNPHQLLGDMAARYHDAVTAGAENLIGP 1200 Query: 1530 PAFDRNGKSAGIWLNPLTTDDG--------NGLRGFSGEGRVKGSGDAQFVALQGSRNGE 1581 D+ A L LT + + +L +R+ Sbjct: 1201 VGMDKIDAHAEALLTGLTEAPAWPTLRSHLALIALDDHSPLKLLTAAVGVGSLADARDPA 1260 Query: 1582 SLL---ADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPG---AITGGRVWG--------- 1626 ++L D++ + AR P PW PG + WG Sbjct: 1261 AVLDARIDDLVADLNAAR--PHDPDTPPATDAPLPWLPGIPARLADAHDWGPFAGAYHQL 1318 Query: 1627 -DIPDNSVQPGAGNGEPVTAEVLAQRQAEEAIRRETERRADEIVRKM---AENKPDLPDG 1682 ++V+ A N TA AQ E+ +TE RAD V + ++ P G Sbjct: 1319 VREQIDAVRDAARNWTGATAPAWAQPFLED---EDTELRADLAVWRAVAGTDDNDLRPTG 1375 Query: 1683 KTEQAVREIAGQERDRAAITEREAALPEGVLREPQRVREAVREIARENLLQERLQQMER 1741 A Q + A+ E + P Q + E VR L +RL ++ER Sbjct: 1376 DRTIGAPG-AYQAKLNRAVREARPSYPFSQRTWYQVLPETVRADPWITPLCQRLARLER 1433 >UniRef50_UPI0001AF46AC exonuclease V subunit alpha n=1 Tax=Mycobacterium kansasii ATCC 12478 RepID=UPI0001AF46AC Length = 1941 Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats. Identities = 164/913 (17%), Positives = 286/913 (31%), Gaps = 164/913 (17%) Query: 43 LQGSVDKDVFTRLLEGRLPDGADLSRMQDGSNRH----RPGYDLTFSAPKSVSMMAMLGG 98 ++ ++ +++FT D +LS ++R GYDLTF+ KSVS + + Sbjct: 163 IRTALAREMFTETYSRPPADERELSGFIASNSRAATTAVAGYDLTFTPVKSVSALWAIAP 222 Query: 99 D---KRLIDAHNQAVDFAVRQVEALAS-TRVMTDGQSETVLTGNLVMALFNHDTSRDQEP 154 + + + H QAV + +E A+ R+ G ++ TG L++A F+H SR +P Sbjct: 223 TPIAQGIEECHRQAVAETLEFLEDQAAFARMGAHGVAQVNSTG-LIVAAFDHRDSRAGDP 281 Query: 155 QLHTHAVVANVTQHNG-----EWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQV- 208 LHTHA V+N Q G W L + +A Y +++ + Sbjct: 282 NLHTHAAVSNKVQVIGPDGVPRWLALDGTPLH---------HATVAASEFYNTRIEALLI 332 Query: 209 EALGYETEVV----GKHGMWEMPGVP---VEAFSGRSQTIREAVGEDAS----------- 250 LG GK + E+ G+ +E FS RS I VGE A Sbjct: 333 AKLGVRFAETPAKRGKRPVREIVGMATALIEKFSSRSAAIDHRVGELAKQFQVDHGREPT 392 Query: 251 ----LKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTP 306 L A L+TR++K P + + + + R AD+ Sbjct: 393 VVEMLALSQRATLETRQAKHE--PRSLGEQRHVWRVQAVEVLGSQRALTAMVADVTNQAV 450 Query: 307 GPASQDGPD-VQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPEN--GVIERARAGIDE 363 + V + IA +SE + +T V A L N G E + Sbjct: 451 SQRVEITDKWVHEHAAAIIATVSESRATWTINHVRAEAQRELRYANHPGGPELVNRLVAS 510 Query: 364 AISREQLI---PLDREK--------------------GLFTSGIHVLDELSVRALS--RD 398 A+S + D EK +++S + E + A + RD Sbjct: 511 ALSEHSVALTTDADAEKNEPAALRRRDGSSVYTRHDTTVYSSADILSAERRILAAAGLRD 570 Query: 399 IM-------KQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAE 451 + + V AG V +A + + G G+ +A Sbjct: 571 GRTVDDTSIGLALLEYQANQDVELNAGQVALVREMASSGARVQLALAPAG-TGKTTAMAA 629 Query: 452 LVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTP---------- 501 L R G V +A + + D + I QL E A P Sbjct: 630 LAGAWRNAGGNVIGLAPTAGAAEVLNTDLNAPTDTIAKLVQLTETRAGEPAPADDPARKW 689 Query: 502 ------GSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMKDAGV 555 + +I+D+ S + ++ A V + Q+ + SA ++D Sbjct: 690 FTAIDSDTLLIIDEAGMASTLDLDIVIAHALARGASVRLIGDDQQLASISAGGILRD--- 746 Query: 556 NTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIR 615 LA + + + +A + AIR Sbjct: 747 ---------------------------LADRYETVTLSTVVRFTHPETGQAEAAASLAIR 779 Query: 616 SELKTQGV---LGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVID 672 + G+ + V + A + D R G + + ++ Sbjct: 780 AG-DPAGIGFYIDHHRVHVGADATAA-DMAYRAWSADIAAG-----RDSILLAPTNELVA 832 Query: 673 RVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLR---- 728 + ++ L + +S + ++ + + + G+ + LR Sbjct: 833 ELNERARLDRLA-----QTTSQPTSPADATTVTLADGLTASAGDWIATRKNARWLRTAQR 887 Query: 729 ---VSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSV--- 782 V G R + +V ED VVP R + + + + G+ T + Sbjct: 888 GKWVKNGHRWIIRTVHEDGSLTVVPLRGRATPVRL-PARYVGTHTTLGYASTINAAQGMT 946 Query: 783 ----SDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETR----TAEKLARHPSFT 834 T ++ L R + Y S E A K P+ Sbjct: 947 AGRRDIEGTCHTVLSDRLTRQQLYVALTRGRTENHCYGSTAEADPHRILAPKATHPPTAV 1006 Query: 835 VVSEQIKTRAGET 847 + I R G Sbjct: 1007 DILSAILARDGAQ 1019 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 95/526 (18%), Positives = 167/526 (31%), Gaps = 81/526 (15%) Query: 854 SHQKSALHTPAQQAIHLALPVVE---SKKLAFSMV--------DLLTEAKS-FAAEGTGF 901 H + + T ++ + V ++L ++ L+ A S + T Sbjct: 463 EHAAAIIATVSESRATWTINHVRAEAQRELRYANHPGGPELVNRLVASALSEHSVALTTD 522 Query: 902 TELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRH--ILEGKE----AVM 955 + A ++R D V + T + S AE+ IL + +G+ ++ Sbjct: 523 ADAEKNEPAALRRRD--GSSVYTRHDTTVYSSADILSAERRILAAAGLRDGRTVDDTSIG 580 Query: 956 PLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPES 1015 + +L +GQ A R + + R + AG GKTT A+ A + Sbjct: 581 LALLEYQANQDVELNAGQVALVREMASSGARVQLALAPAGTGKTTAMAALAGAWR----N 636 Query: 1016 ERPRVVGLGPTHRAVGEMR-SAGVDAQTLASFLHDTQLQQRSGETPDF----------SN 1064 V+GL PT A + T+A + T+ + D S+ Sbjct: 637 AGGNVIGLAPTAGAAEVLNTDLNAPTDTIAKLVQLTETRAGEPAPADDPARKWFTAIDSD 696 Query: 1065 TLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVA 1124 TL ++DE+ M D+ A A G GD QL +I+ G R R + Sbjct: 697 TLLIIDEAGMASTLDLDIVIAHALARGASVRLIGDDQQLASISAGGILRDLADR--YETV 754 Query: 1125 IMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQE 1184 + +VR + + +A + + P G + H V + + Sbjct: 755 TLSTVVR-----------FTHPETGQAEAAASLAIRAGDPAGIGFYIDHHRVHVGADATA 803 Query: 1185 AKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMI 1244 A +A R ++ R+ +++ NE LN Sbjct: 804 ADMAY------------------------RAWSADIAAGRDS-ILLAPTNELVAELNERA 838 Query: 1245 HDVREKAGELG----KEQVMVPVLNTANIRDGE---LRRLSTWETHRDALVLVDNVYHRI 1297 R + V + + G+ R+ + W V N + I Sbjct: 839 RLDRLAQTTSQPTSPADATTVTLADGLTASAGDWIATRKNARWLRTAQRGKWVKNGHRWI 898 Query: 1298 AGISKDDGLITLQDAEGNTRLIS-PREAVAEGVTLYTPDTIRVGTG 1342 +DG +T+ G + P V TL TI G Sbjct: 899 IRTVHEDGSLTVVPLRGRATPVRLPARYVGTHTTLGYASTINAAQG 944 Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 39/235 (16%), Positives = 73/235 (31%), Gaps = 21/235 (8%) Query: 1260 MVPVLNTANIRDGELRR---LSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNT 1316 V A+ ++ + RD+++L +A +++ L + Sbjct: 792 HHRVHVGADATAADMAYRAWSADIAAGRDSILLAPTNEL-VAELNERARL------DRLA 844 Query: 1317 RLISPREAVAEGVTLYTPDTIRVGTGDRM------RFTKS-DRERGYVANSVWTVTAV-- 1367 + S + A+ T+ D + GD + R+ ++ R + W + V Sbjct: 845 QTTSQPTSPADATTVTLADGLTASAGDWIATRKNARWLRTAQRGKWVKNGHRWIIRTVHE 904 Query: 1368 SGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMA 1427 G + + +R H L YA T + AQG + Sbjct: 905 DGSLTVVPLRGRATPVRLPARYVGTHTTLGYASTINAAQGMTAGRRDIEGTCHTVLSDRL 964 Query: 1428 GFESAYVALSRMKQHVQVYTDNRQGWTDAI--NNAVQKGTAHDVFEPKPDREVMN 1480 + YVAL+R + Y + I A TA D+ R+ Sbjct: 965 TRQQLYVALTRGRTENHCYGSTAEADPHRILAPKATHPPTAVDILSAILARDGAQ 1019 >UniRef50_Q0RC71 Putative uncharacterized protein n=2 Tax=Frankia alni ACN14a RepID=Q0RC71_FRAAA Length = 1471 Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats. Identities = 183/922 (19%), Positives = 302/922 (32%), Gaps = 155/922 (16%) Query: 47 VDKDVFTRLLEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGD---KRLI 103 V +D R LE R P L G+D+T SAPKSVS++ G D + L Sbjct: 219 VHRDELARFLEEREPPTVVL------------GFDVTASAPKSVSLLWAFGDDDLRRDLA 266 Query: 104 DAHNQAVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVA 163 +A N AVD A+ +E A + DG + + L F HD SR +EP LH H V+A Sbjct: 267 EAMNVAVDAAIGYLERQAGVGL-VDGHNRPGV--GLAGVSFLHDISRAEEPHLHIHTVLA 323 Query: 164 NVT-----------QHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVE-AL 211 N +G + V +T E ++A+ G + L+ ++ Sbjct: 324 NAVPIPLLDEDGEPLRDGAGR---PRMVWRTVDSELLHAHVKTAGYVAAAVLRHELSARR 380 Query: 212 GYETEVVGKHGMWEMPGVPVEA---FSGRSQTIREAVGE------DASLKSRDVAALDTR 262 G + V ++G+ E+ G+P + FS R I + E R+ TR Sbjct: 381 GLQWGPV-RNGVAELAGLPADLLAVFSSRRAQIDAELAELVASGATDGPALREAVQRGTR 439 Query: 263 KSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQ 322 K+ L+ G+ AA R D R GP D ++ + +T Sbjct: 440 APKRAQADAEIRTAQHARLEAAGWTAADVL-AAGARTDYRPTAIGPD--DLAELAELLT- 495 Query: 323 AIAGLSERKVQFTYTDVLARTV--GILPPENGVIERARAGIDEAISREQLIPLDREKGL- 379 GL+ R FT DV G+ + I+R A I A +R ++ D + Sbjct: 496 GPDGLTARSATFTARDVAQAVAAWGVDRLDATDIDRLTAHI-LADARLAMVDEDTPRRRR 554 Query: 380 -----FTSGIHVLDELSVRALSRDIM-----KQNRVTVHPEKSVP--------------- 414 +T+ + E +V AL +++R+ E Sbjct: 555 DPEPIYTTLDLLDAEDNVLALCEAGRTAYAGREHRLIGPDELEAALAGHLDPRREYGAGH 614 Query: 415 -----RTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAAD 469 DAV L + ++ G G +G+ E + LV + R+ GR V A Sbjct: 615 VEPAVLAVEQVDAVRALLTSTDLVRVLVGPAG-SGKTEAMRLLVAVLRDAGRTVLGAAHG 673 Query: 470 RRSQMNMKQDERLSGELITGRRQLLEGMAF-----TPGSTVIVDQGEKLSLKETLTLLDG 524 R + + G ++ G LL+ PG+ +I+D+ ++ + LL Sbjct: 674 GRQTEELTGRLGIDGRVVAGWLTLLDHADRPADIWPPGTMLILDEATHVTTRNAARLLRY 733 Query: 525 AARHNVQVL-ITDSGQRTGTGS-------ALMAMKDAGVNTYRWQGGEQRPAT------- 569 A +L + D Q G A A + T Q G Sbjct: 734 ATDTGTVILALGDPAQLGAIGPGGWFAHLAATLPDVATLTTVHRQAGAGMNGVRAALAGL 793 Query: 570 IISEPDRNVRY-ARLAGDFAASVKAGEESVA--QVSGVRE-----QAILTQAIRSELKTQ 621 PD+ R ARLA D S+ V + ++ T A R+ + Sbjct: 794 RAGAPDQVRRAMARLAADGRLHRFHDRPSLLAAIVEDWHDERSTVRSAATGANRARVDAN 853 Query: 622 ----GVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQ 677 G + RSR D R + P + D ++ + Sbjct: 854 RARVGAASGADHA---------PGRSRRGADHSRHVDL-----PRMMAGDHGTVEWLNRA 899 Query: 678 SHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQV 737 + ++ + + + + + G L G+ + G V Sbjct: 900 AQLRRMQAGE-LDPDLFLEVAGRRFHVGDEVITLTQAGHTLIPAGRPASAYIRTGTIGTV 958 Query: 738 ASVSEDAMTVVVPGRAEPATLPVSDSPFTALK-----------------LENGWVETPGH 780 ++ T R E TL V + L + + T Sbjct: 959 LAIDSGPAT---DDRPEGRTLTVDFPGKGVVSIGWDYLTHVFPDGRDGGLTHAYAITAHK 1015 Query: 781 SV-SDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEK-----LARHPSFT 834 + S AT VT L+R+ D+ Y + A L P+ Sbjct: 1016 AQGSTMATARPVVTDRTSRPGLYVMLSRARTDLAAYLIDSDELAAPGDTEDLLPVVPTRG 1075 Query: 835 VVSEQIKTRAGETSLETAISHQ 856 +++ R + + + Sbjct: 1076 DPLDRLAGRLAASRTDRLVQAL 1097 Score = 146 bits (368), Expect = 7e-33, Method: Composition-based stats. Identities = 114/692 (16%), Positives = 202/692 (29%), Gaps = 79/692 (11%) Query: 792 VTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLET 851 V A D L + G + D + AR + + + T Sbjct: 420 VASGATDGPALREAVQRGTRAPKRAQADAEIRTAQHARLEAAGWTAADVLAAGARTDY-R 478 Query: 852 AISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQ 911 + L A+ + ++ F+ D+ ++ + T++ Sbjct: 479 PTAIGPDDLAELAELLT--GPDGLTARSATFTARDVAQAVAAWGVDRLDATDIDRLTAHI 536 Query: 912 IKRGDLLYVD----VAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERV------ 961 + L VD + + + +AE ++L G+ A R+ Sbjct: 537 LADARLAMVDEDTPRRRRDPEPIYTTLDLLDAEDNVLALCEAGRTAYAGREHRLIGPDEL 596 Query: 962 PGELMEKLTS----------------GQRAATRMILETSDRFTVVQGYAGVGKTTQFRAV 1005 L L Q A R +L ++D V+ G AG GKT R + Sbjct: 597 EAALAGHLDPRREYGAGHVEPAVLAVEQVDAVRALLTSTDLVRVLVGPAGSGKTEAMRLL 656 Query: 1006 MSAVNMLPESERPRVVGLGPTHRAVGEMRS-AGVDAQTLASFLHDTQLQQRSGETPDFSN 1064 ++ + V+G R E+ G+D + +A +L R + Sbjct: 657 VAVLR----DAGRTVLGAAHGGRQTEELTGRLGIDGRVVAGWLTLLDHADRPADI-WPPG 711 Query: 1065 TLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVA 1124 T+ +LDE++ V + AR G +A GD QL AI PG F + DVA Sbjct: 712 TMLILDEATHVTTRNAARLLRYATDTGTVILALGDPAQLGAIGPGGWFA-HLAATLPDVA 770 Query: 1125 IMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQE 1184 + + RQ V + + + + + Sbjct: 771 TLTTVHRQAGAGMNGVRA----------------ALAGLRAGAPDQVRRAMARLAADGRL 814 Query: 1185 AKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMI 1244 + + E + D T+ A R R + + Sbjct: 815 HRFHDRPSLLAAIVEDWHDERSTVRSAATGANRARVDANRAR----------VGAASGAD 864 Query: 1245 HD-VREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKD 1303 H R + G V +P + + E + A L +++ +AG Sbjct: 865 HAPGRSRRGADHSRHVDLPRMMAGDHGTVEWLNRAAQLRRMQAGELDPDLFLEVAGRRFH 924 Query: 1304 DGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWT 1363 G + + LI + + G + T Sbjct: 925 VGDEVITLTQAGHTLIPAGRPASAYI-------RTGTIGTVLAIDSGPATDDRPEGRTLT 977 Query: 1364 VTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNR 1423 V G V + P + + + AYAITAH AQG++ A + +R Sbjct: 978 V-DFPGKGVVSIGWDYLTHVFP--DGRDGGLTHAYAITAHKAQGSTMATARPVVTDRTSR 1034 Query: 1424 KLMAGFESAYVALSRMKQHVQVYTDNRQGWTD 1455 + YV LSR + + Y + Sbjct: 1035 PGL------YVMLSRARTDLAAYLIDSDELAA 1060 >UniRef50_Q70K35 Putative TraA protein n=1 Tax=Gordonia westfalica RepID=Q70K35_9ACTO Length = 2072 Score = 200 bits (507), Expect = 6e-49, Method: Composition-based stats. Identities = 158/1023 (15%), Positives = 297/1023 (29%), Gaps = 210/1023 (20%) Query: 28 SMGERWAG--RGAEQLGLQGSVDKDVFTRLLEGRLPDGADLSRMQDGSNRHR----PGYD 81 + GERW + L+ + ++ FT+ D +LS +R R GYD Sbjct: 149 ARGERWDAVIDDDTRAALRTELGRERFTKTYRRPPRDSRELSGFIAQESRRRQSAVAGYD 208 Query: 82 LTFSAPKSVSMMAMLGG---DKRLIDAHNQAVDFAVRQVEALAS-TRVMTDGQSETVLTG 137 +TFS KSVS + + +++ AH QAV A+ +E A +R+ TDG ++ V T Sbjct: 209 MTFSPVKSVSALWAVAPLPMAEKIEAAHRQAVADALAFIEREACLSRLGTDGIAQ-VDTD 267 Query: 138 NLVMALFNHDTSRDQEPQLHTHAVVANVTQHNG-----EWKTLSSDKVGKTGFIENVYAN 192 L+ A F H SR +P LHTH ++N + W L ++ Sbjct: 268 GLIAAAFTHRDSRAGDPDLHTHVAISNKVRVRDAAGITRWMALDGTP---------LFKA 318 Query: 193 QIAFGRLYREKLKEQV-EALGYETEV-----VGKHGMWEMPGVPVEA---FSGRSQTIRE 243 ++ +Y +++ + LG V K + E+ GV E +S R I E Sbjct: 319 TVSASEVYNSRIELYLQRDLGVSFSERFSADVRKRPVREIDGVSAELMARWSSRRAAIEE 378 Query: 244 AVGEDAS---------------LKSRDVAALDTRKSK-QHVDPEIKMAEWMQTLKETGFD 287 + E + A LDTR++K + + W + Sbjct: 379 RIDELSKQFLADHGREPTTGEAFDLAQQATLDTREAKHEPRSYAEQRQAWRADARRILGG 438 Query: 288 IRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGIL 347 RA D + R T + I +S + ++ + A L Sbjct: 439 DRAISDLVHEATHPRPRTREHPEFTDELCTELAANCIENISATRARWQRPHLRAEAERQL 498 Query: 348 PPENG----VIERARAGIDEAI-----------------------------SREQLIPLD 374 + + A ++ + + + + + Sbjct: 499 RARDFAGITDTDELAAAVERIVDTALAADTSVAVSSDALDGDLNEPEVLRRANGESVFVR 558 Query: 375 REKGLFTSGIHVLDELSVRALSRDIMKQN--------RVTVHPEKSVPRTAGYSDAVSVL 426 + L TS + E + A ++ + + AG + V L Sbjct: 559 HDVALHTSTDILAAEHRIVAAAKRTDGRRLDETTVDIALLEQAANGRELNAGQAAMVREL 618 Query: 427 AQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGEL 486 A + +V G G+ + L + G + +A + ++ + + + Sbjct: 619 ATSGRRVQLVLAPAG-TGKTTAMRTLARAWTDSGGTLIGLAPTAAAAAVLRDELDTTTDT 677 Query: 487 ITGRRQLLEGM------------------------------------------------- 497 QL Sbjct: 678 AAKLVQLATAERELAQTRALAATPRWRTIGKPELANKVAAAKKTLADPTYQNLTLPDWYT 737 Query: 498 AFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMKDAGVNT 557 P + V+VD+ S + ++ A V + Q+ + SA ++D T Sbjct: 738 QIGPDTLVVVDEAGMASTSDLDEVIRCVAARGGSVRLVGDDQQLASISAGGVLRDVAHET 797 Query: 558 YRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSE 617 + ++ D A LA ++ G+ + Sbjct: 798 GALT-----LSQVVRFSDAAEGAASLA------LRDGDPAALGFYA-------------- 832 Query: 618 LKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQ 677 G + + A +R R + D +I Sbjct: 833 --DHGRIHVESDAAAADDAYRAWARDR------------------AQGRDTVMIAATRDT 872 Query: 678 SHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVS------G 731 ++L R + L + + + G+ + LRVS Sbjct: 873 VNALNERARADRLAAIDPHLHGPELRL--SDGLSASVGDIISTRSNRRDLRVSATDWVRN 930 Query: 732 GDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFAS 791 GDR +V + D + + + + A G+ T + +A Sbjct: 931 GDRWRVTHIGADG--TLTAQHLDLNRHVQLPADYVAEHTTLGYASTIHAAQGMTADTCHV 988 Query: 792 VTQMAMDNATLNGLARSGRD-VRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLE 850 + A+D L GR +Y ET P + + G +L Sbjct: 989 IGSDALDRQLLYVAMTRGRHGNHIYLPTTET--------DPHNATTPKARHPQTGLETLA 1040 Query: 851 TAI--SHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEI 908 + + + T + A+ P + + A + L A +L + Sbjct: 1041 AILGRDGAQQSATTAQRDAVD---PFLRLSRAAAAYDHALGAAAEHTLGAKALRDLEHDA 1097 Query: 909 NAQ 911 +A Sbjct: 1098 DAL 1100 Score = 111 bits (277), Expect = 3e-22, Method: Composition-based stats. Identities = 86/537 (16%), Positives = 149/537 (27%), Gaps = 115/537 (21%) Query: 871 ALPVVESKK-LAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKG---- 925 A + ++ + D L A + + +++ GDL +V + Sbjct: 494 AERQLRARDFAGITDTDELAAAVERIVDTALAADTSVAVSSDALDGDLNEPEVLRRANGE 553 Query: 926 -----YGTGLLVSRASYEAEKSILRHILEGKE-----AVMPLMERVPGELMEKLTSGQRA 975 + L S AE I+ + + +L +GQ A Sbjct: 554 SVFVRHDVALHTSTDILAAEHRIVAAAKRTDGRRLDETTVDIALLEQAANGRELNAGQAA 613 Query: 976 ATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRS 1035 R + + R +V AG GKTT R + A ++GL PT A +R Sbjct: 614 MVRELATSGRRVQLVLAPAGTGKTTAMRTLARA----WTDSGGTLIGLAPTAAAAAVLRD 669 Query: 1036 A-GVDAQTLASFLHDTQLQQRSGETPDFS------------------------------- 1063 T A + ++ +T + Sbjct: 670 ELDTTTDTAAKLVQLATAERELAQTRALAATPRWRTIGKPELANKVAAAKKTLADPTYQN 729 Query: 1064 ------------NTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQP 1111 +TL ++DE+ M +D+ +AA GG GD QL +I+ G Sbjct: 730 LTLPDWYTQIGPDTLVVVDEAGMASTSDLDEVIRCVAARGGSVRLVGDDQQLASISAGGV 789 Query: 1112 FRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWA 1171 R + A + ++VR + A + AL Sbjct: 790 LRDVAHETGALT--LSQVVRFSDAAEGAASLALRDGDPAALGFY---------------- 831 Query: 1172 PEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVT 1231 R T+++ Sbjct: 832 ------------------------ADHGRIHVESDAAAADDAYRAWARDRAQGRDTVMIA 867 Query: 1232 HLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALV--- 1288 + LN R A + P L ++ + + + ++R L Sbjct: 868 ATRDTVNALNERARADRLAA---IDPHLHGPELRLSDGLSASVGDIISTRSNRRDLRVSA 924 Query: 1289 ---LVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTG 1342 + + R+ I DG +T Q + N + P + VAE TL TI G Sbjct: 925 TDWVRNGDRWRVTHIGA-DGTLTAQHLDLNRHVQLPADYVAEHTTLGYASTIHAAQG 980 Score = 63.3 bits (152), Expect = 9e-08, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 54/157 (34%), Gaps = 16/157 (10%) Query: 1297 IAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGY 1356 IA + + I P G L D + GD + + R+ Sbjct: 866 IAATRDTVNALNERARADRLAAIDPHLH---GPELRLSDGLSASVGDIISTRSNRRDLRV 922 Query: 1357 ------VANSVWTVTAV-SGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGAS 1409 W VT + + ++T R ++ + +H L YA T H AQG + Sbjct: 923 SATDWVRNGDRWRVTHIGADGTLTAQHLDLNRHVQLPADYVAEHTTLGYASTIHAAQGMT 982 Query: 1410 ETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVY 1446 + +R+L+ YVA++R + +Y Sbjct: 983 ADTCHVIGSDALDRQLL------YVAMTRGRHGNHIY 1013 >UniRef50_C8XHE2 TrwC relaxase n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XHE2_NAKMY Length = 1231 Score = 199 bits (506), Expect = 7e-49, Method: Composition-based stats. Identities = 142/904 (15%), Positives = 268/904 (29%), Gaps = 119/904 (13%) Query: 70 QDGSNRHRPGYDLTFSAPKSVSMMAMLGG---DKRLIDAHNQAVDFAVRQVEALASTRVM 126 + + G+DLTFS PKSVS + L ++L AH A+ + +E A + Sbjct: 127 ETKTRTAVAGFDLTFSVPKSVSALWALAPAPVQEQLYLAHRAALAATLELIEGEAVFTRL 186 Query: 127 TDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ-HNGEWKTLSSDKVGKTGF 185 V T LV A F+H SR +PQLHTH VAN Q +G W+TL S Sbjct: 187 GHNGVRRVRTAGLVAAAFDHWDSRRGDPQLHTHVTVANRVQGPDGRWRTLDS-------- 238 Query: 186 IENVYANQIAFGRLYREKLKEQV-EALGYETEVVGKHG------MWEMPGVP---VEAFS 235 ++ +A+ Y L +++ G + + E+ VP + AFS Sbjct: 239 -ATLHQAAVAYSETYDLLLADEITRRTGLTWDRRERQAGSNRRIGRELAPVPDALIAAFS 297 Query: 236 GRSQTIREAV---------------GEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQT 280 RS I AV +A + R L TR K + + +W T Sbjct: 298 QRSADIEAAVDTAIAQAVLRTGRRPDVNAINRIRQHLTLATRDRKHAPNLAESVQQWRAT 357 Query: 281 LKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVL 340 + GPA D + + + ++ + +T ++ Sbjct: 358 AEHVLDRDPTDWATTATTTGQAGPLLGPADLDDIETEAIALGVVDAVAAARPTWTRWNLT 417 Query: 341 ARTVGILPPEN----------GVIERARAGIDE---AISREQLIPLDREKG--------- 378 A T+ L V +R A A++ +L P+ Sbjct: 418 AETMRQLAARGLQFTIPADAVAVRDRVVAAAQRLSVALTPPELAPIPDALRDADGASPFT 477 Query: 379 ---LFTSGIHVLDELSVRALSRDI----------MKQNRVTVHPEKSVPRTAGYSDAVSV 425 +FTS + E + L +D + + A Sbjct: 478 PPEVFTSTAVLAAEDQLLRLGQDRSGPAVDPDRARRVAGQDLPGRDHALAAEDQRPAAVQ 537 Query: 426 LAQDRPSLAIVSGQGGAAGQRERVAELVMM--AREQGREVQIIAADRRSQMNMKQDERLS 483 + + ++ G G G+ +A + + A V +A + + D + Sbjct: 538 IVTSGRVVDVLVGPAG-TGKTTTMAGVRAIWEAEYGPGTVVGLAPSAMAAQVLAADVGIV 596 Query: 484 GELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGT 543 + + ++ ++ E + G +V R Sbjct: 597 TDNTAQWIAQQDQQTRREHRIRLLTDA--ITTPENPNRIQGLRAARGRVQGEYDQWRLRP 654 Query: 544 GSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSG 603 G L+ + T+ A + + + L GD + Sbjct: 655 GQLLIVDEAGMCGTFTL-------ARLAGQAAKAGAKLLLVGDPCQLSPVETGGAFGLLC 707 Query: 604 VREQAILT-QAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPE 662 R T +R G + L S Y + + + Sbjct: 708 ARHPDPATLTQVRRFTDPDG----TRRAWEEQAADRLRSGDSTALAEYDAHGRVRSGDQD 763 Query: 663 TRSHDRYVI-----------DRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMP 711 + + Y + A + ++ + + T ++ +D++ + + Sbjct: 764 QMADNAYTAWLSDTHDGLTSVLIAADNDTVVELNQRARTDLISTGQVDNTATAPVRNGLS 823 Query: 712 VADGERLRV-------------TGKIPGLRVSGGDRLQVASVSEDA-MTVVVPGRAEPAT 757 V G+ + T V G R +V D +TV + + T Sbjct: 824 VGRGDVIVTRRIDRTQPDGTPRTADSGDGFVRNGQRWRVERAHRDGSLTVRLHTSDDTGT 883 Query: 758 LPVS-DSPFTALKLENGWVETPGHSV-SDSATVFASVTQMAMDNATLNGLARSGRDVRLY 815 P+ + + ++ G+ T + T + A + R Y Sbjct: 884 TPIRLSATYVHDHVDLGYATTAHRAQGLTVDTSHVLADALTQREAFYVAMTRGRYRNTAY 943 Query: 816 SSLDETRTAEKLARHPSFTVVSEQI--KTRAGETSLETAISHQKSALHTPAQQAIHLALP 873 LD T + HP + + E+ + + + + +Q H ++ Sbjct: 944 LVLDPAATVRGIVDHPIGGSADQDSWTTQQVAESISDHSSADTSAHETIRTEQDRHASIR 1003 Query: 874 VVES 877 + Sbjct: 1004 TLAD 1007 Score = 143 bits (359), Expect = 8e-32, Method: Composition-based stats. Identities = 101/561 (18%), Positives = 155/561 (27%), Gaps = 144/561 (25%) Query: 931 LVSRASYEAEKSILRHILEGKEAVMPLME--RVPGELMEKL--------TSGQRAATRMI 980 S A AE +LR G++ P ++ R + L QR A I Sbjct: 482 FTSTAVLAAEDQLLRL---GQDRSGPAVDPDRARRVAGQDLPGRDHALAAEDQRPAAVQI 538 Query: 981 LETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMR-SAGVD 1039 + + V+ G AG GKTT V + E VVGL P+ A + G+ Sbjct: 539 VTSGRVVDVLVGPAGTGKTTTMAGVRAIWE--AEYGPGTVVGLAPSAMAAQVLAADVGIV 596 Query: 1040 AQTLASFLHDTQLQQRSGET----------------------------------PDFSNT 1065 A ++ Q R Sbjct: 597 TDNTAQWIAQQDQQTRREHRIRLLTDAITTPENPNRIQGLRAARGRVQGEYDQWRLRPGQ 656 Query: 1066 LFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAI 1125 L ++DE+ M G +AR A G + + GD QL + G F L R D A Sbjct: 657 LLIVDEAGMCGTFTLARLAGQAAKAGAKLLLVGDPCQLSPVETGGAFGLLCARH-PDPAT 715 Query: 1126 MKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEA 1185 + ++ R P E + Sbjct: 716 LTQVRR-----------------------------FTDPDGTRRAWEEQAADRLRSGDST 746 Query: 1186 KLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIH 1245 LAE ++ + Y A + T + LI N+ LN Sbjct: 747 ALAEYDAHGRVRSGDQDQMADNAYTA----WLSDTHDGLTSVLI-AADNDTVVELNQRAR 801 Query: 1246 DVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDG 1305 G++ R+ L + Sbjct: 802 TDLISTGQVDNTAT---------------------APVRNGLSVGRGD------------ 828 Query: 1306 LITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVT 1365 +I + + +PR A + + G R R ++ R+ Sbjct: 829 VIVTRRIDRTQPDGTPRTADSGDGFV--------RNGQRWRVERAHRDGSLTVR------ 874 Query: 1366 AVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKL 1425 + SD T IR H+DL YA TAH AQG + + L Sbjct: 875 ------LHTSDDTGTTPIRLSATYVHDHVDLGYATTAHRAQGLTVDTSHVLADA------ 922 Query: 1426 MAGFESAYVALSRMKQHVQVY 1446 + E+ YVA++R + Y Sbjct: 923 LTQREAFYVAMTRGRYRNTAY 943 >UniRef50_A4T240 ATP-dependent exoDNAse (Exonuclease V) alpha subunit-helicase superfamily I member-like protein n=5 Tax=Mycobacterium RepID=A4T240_MYCGI Length = 1955 Score = 196 bits (498), Expect = 6e-48, Method: Composition-based stats. Identities = 143/850 (16%), Positives = 258/850 (30%), Gaps = 140/850 (16%) Query: 57 EGRLPDGAD-----LSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGG---DKRLIDAHNQ 108 GR P ++R GYDLTFS KSVS + + +++ AH+ Sbjct: 176 YGRPPADDRELSGFIARNTRAKTTAVAGYDLTFSPVKSVSALWAIAPLPVAEQIEAAHDA 235 Query: 109 AVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANV--- 165 AV + ++ A+ G V T L+ A+F H SR +P LHTH ++N Sbjct: 236 AVADVLEWLQEQAAFTRTGAGGVAQVDTEGLIAAVFTHRDSRAGDPDLHTHVAISNKVSY 295 Query: 166 TQHNG--EWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQV-EALGY----ETEVV 218 NG W L + + +A LY +L+ + LG ++ Sbjct: 296 VDANGVRRWLALDGQPLHRV---------TVAASELYNTRLEAHLIARLGVRFAEQSRGR 346 Query: 219 GKHGMWEMPGVP---VEAFSGRSQTIREAVGEDAS---------------LKSRDVAALD 260 GK + E+ G+ +E +S R I+ E A + A L+ Sbjct: 347 GKRPVREIVGMSARLMERWSSRRAAIKARTAELAKQFQADHGREPTNVEIIALAQHATLE 406 Query: 261 TRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAV 320 +R++K + E Q + ++ R +D D + Sbjct: 407 SREAKHEPRS---LGEQRQEWRTQAVEVLGERGVNQMLSDTLAAPQTTREAVTIDEEWFA 463 Query: 321 TQA---IAGLSERKVQFTYTDVLARTVGILPPEN--GVIERARAGIDEAISREQLIP--- 372 ++A IA ++E + + V A + + + + D A+ +P Sbjct: 464 SRAGELIATVAESRSTWQRHHVRAEALRMARGHDVAHDVALVERLTDTALGEGFSVPHAR 523 Query: 373 -----------LDREKG----------LFTSGIHVLDELSVRALSRDIMKQNRVTVHPEK 411 L R G L+TS + E + + E Sbjct: 524 VEDAELGEPVALRRRDGASVYRRHGVALYTSQETLAAEQRILDAVHRGDGRVASAADVEM 583 Query: 412 SVP--------RTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREV 463 ++ G + V+ +A +A+ G G+ +A L R G V Sbjct: 584 ALADSTARGRTLNPGQAALVTEMATAGRRVALALAPAG-TGKTTAMAALAHAWRSSGGHV 642 Query: 464 QIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFT------------PGSTVIVDQGE 511 +A + + + +D + + + + P + ++VD+ Sbjct: 643 IGLAPTADAAIVLGEDLGATTDTLDKYVWSADPAKAATSHVPDWFSRVGPDTLIVVDEAG 702 Query: 512 KLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMKD------------------- 552 K + ++ A + V + + + SA ++D Sbjct: 703 KAATAGLDAMIRDALKKGASVRLVGDDGQLSSISAGGILRDIAEATDALTLSEVVRFKSP 762 Query: 553 ----AGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFA-----ASVKAGEESVAQVSG 603 AG+ + I +V A D A A + AG +S+ Sbjct: 763 AEAAAGLALH--DADPAGIGFYIDHHRIHVGTDETAADMAYQAWRADLAAGGDSILLAPT 820 Query: 604 VREQAILTQAIR-SELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPE 662 L R L + A + R R + N Sbjct: 821 NDVINELNARARIDRLAADPEAAKSPTVVLAEQLHASVGDTIRTRKNNRR--IGIGRNDF 878 Query: 663 TRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTG 722 R+ RY I V A G + + +L + A G +T Sbjct: 879 VRNGYRYTITEVLADGGVKARHLRSGRIVTLPADYIAEHVTLGYAATIDSAQG----LTS 934 Query: 723 KIPGLRVSGGDRLQVAS--VSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGH 780 R G V S ++ + V + + L +S + +L + P Sbjct: 935 GSRDTR---GTCHIVGSDMLTRQHLYVALTRGTDENHLYLSTAEGDPHRLLSPKATHPDT 991 Query: 781 SVSDSATVFA 790 +V + A Sbjct: 992 AVDVLTRILA 1001 Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats. Identities = 97/536 (18%), Positives = 153/536 (28%), Gaps = 61/536 (11%) Query: 821 TRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKL 880 A + T+ E +RAGE A S H +A+ +A + + Sbjct: 443 DTLAAPQTTREAVTIDEEWFASRAGELIATVAESRSTWQRHHVRAEALRMARGHDVAHDV 502 Query: 881 AFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAE 940 A L A E+ + V + +G L S+ + AE Sbjct: 503 ALVER-LTDTALGEGFSVPHARVEDAELGEPVALRRRDGASVYRRHGVALYTSQETLAAE 561 Query: 941 KSILRHILEGKEAVMPLMERVPGEL-----MEKLTSGQRAATRMILETSDRFTVVQGYAG 995 + IL + G V + L GQ A + R + AG Sbjct: 562 QRILDAVHRGDGRVASAADVEMALADSTARGRTLNPGQAALVTEMATAGRRVALALAPAG 621 Query: 996 VGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM-RSAGVDAQTLASFLHDTQLQQ 1054 GKTT A+ A S V+GL PT A + G TL ++ + Sbjct: 622 TGKTTAMAALAHAWR----SSGGHVIGLAPTADAAIVLGEDLGATTDTLDKYVWSADPAK 677 Query: 1055 RSGE------TPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAP 1108 + + +TL ++DE+ + G GD QL +I+ Sbjct: 678 AATSHVPDWFSRVGPDTLIVVDEAGKAATAGLDAMIRDALKKGASVRLVGDDGQLSSISA 737 Query: 1109 GQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEG 1168 G R A D + E+VR EA L D + A Sbjct: 738 GGILRDIAE--ATDALTLSEVVRFKSPA-EAAAGLALHDADPA----------------- 777 Query: 1169 AWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTL 1228 + + Y+A D A ++ Sbjct: 778 -----------------GIGFYIDHHRIHVGTDETAADMAYQAWRAD-----LAAGGDSI 815 Query: 1229 IVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGE--LRRLSTWETHRDA 1286 ++ N+ LN+ R A + V + + G+ R + Sbjct: 816 LLAPTNDVINELNARARIDRLAADPEAAKSPTVVLAEQLHASVGDTIRTRKNNRRIGIGR 875 Query: 1287 LVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTG 1342 V N Y DG + + + P + +AE VTL TI G Sbjct: 876 NDFVRNGYRYTITEVLADGGVKARHLRSGRIVTLPADYIAEHVTLGYAATIDSAQG 931 Score = 64.5 bits (155), Expect = 4e-08, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 62/178 (34%), Gaps = 9/178 (5%) Query: 1302 KDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGY----- 1356 + +I +A ++ A+ T+ + + GD +R K++R G Sbjct: 819 PTNDVINELNARARIDRLAADPEAAKSPTVVLAEQLHASVGDTIRTRKNNRRIGIGRNDF 878 Query: 1357 -VANSVWTVTAV-SGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAI 1414 +T+T V + V + R + + +H+ L YA T AQG + Sbjct: 879 VRNGYRYTITEVLADGGVKARHLRSGRIVTLPADYIAEHVTLGYAATIDSAQGLTSGSRD 938 Query: 1415 ALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAI--NNAVQKGTAHDVF 1470 M + YVAL+R +Y +G + A TA DV Sbjct: 939 TRGTCHIVGSDMLTRQHLYVALTRGTDENHLYLSTAEGDPHRLLSPKATHPDTAVDVL 996 >UniRef50_C2AI56 TrwC relaxase n=1 Tax=Tsukamurella paurometabola DSM 20162 RepID=C2AI56_TSUPA Length = 948 Score = 196 bits (497), Expect = 9e-48, Method: Composition-based stats. Identities = 118/704 (16%), Positives = 215/704 (30%), Gaps = 158/704 (22%) Query: 67 SRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDK---RLIDAHNQAVDFAVRQVEALAST 123 ++ + + GYDLTF+ KSVS+M L + ++ AH AV A+ +E A Sbjct: 173 AKEKGKVRQPVAGYDLTFTPVKSVSVMWALADPETRAKIETAHQAAVGDALSWLEDNAVF 232 Query: 124 RVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVT-QHNGEWKTLSSDKVGK 182 + + T L +A F+H +R +P LHTH V+N +G W ++S Sbjct: 233 TKRGARGEQQLSTAGLTVAQFDHYDTRAGDPNLHTHCAVSNKVLGSDGRWGAINSLPF-- 290 Query: 183 TGFIENVYANQIAFGRLYREKLKEQVE-ALGYETEV----VGKHGMWEMPGVP---VEAF 234 + N +A + Y L E + LG E GK + E+ G+ ++ F Sbjct: 291 -------FNNAVAASQRYNAVLAETLRAELGVEFVARQVGRGKQPIMEIAGIDTALLDGF 343 Query: 235 SGRSQTIREAV---------------GEDASLKSRDVAALDTRKSKQHVDPEI-----KM 274 S R +R G+ A A L+TR+ K ++ Sbjct: 344 STRRAQVRARHEQLLAQYIADHGHTPGKHAEYALFQQATLETREGKDVGPEGSGSLGKQL 403 Query: 275 AEWMQTLKETGFDIRAYRDAADQ-----RADLRTLTPGPASQDGPDV---QQAVTQAIAG 326 W + + Q R L ++ P + A + + Sbjct: 404 TAWQSKARALAPEQAQGEQLLAQCRIAGREALAAISNDPDAAPDRAWHGPAAAAEEVLHK 463 Query: 327 LSERKVQFTYTDVLAR-----TVGILPPENGVIERARAGIDEAISREQLIP--------- 372 + E++ + T + +LP + E ++ A++ ++ Sbjct: 464 VCEQRSVWRETHLRTAAEAIIAAKLLPSGSDRRELVDTVVERALAESMIVGPGHELLDTT 523 Query: 373 -------LDREKGLF----------TSGIHVLDELSVRALSRD---------IMKQNRVT 406 L R+ G TS V E ++ + ++ + Sbjct: 524 TGEIPERLRRDNGEHVLTNPGGPLLTSSRIVDAENTILDAAATPTAHVATNAVIDAGIAS 583 Query: 407 VHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMM---------AR 457 V + P AG ++ V +A G G G+ + V Sbjct: 584 VEENEPFPLNAGQAELVRHFCGSGALVAAGVGPAG-TGKTTSMKATVAAWTADANRLPGA 642 Query: 458 EQGREVQIIAADRRSQMNMKQDERLSGELITGR----------------RQLLEGMAF-- 499 R+V +A + + + L+G I Q+L Sbjct: 643 AVNRQVIPLAPSAVAATKLGDEIELTGNTIDSFTYWWTAMGGRETYLTAHQVLADPDAGF 702 Query: 500 -------------TPGSTVIVDQGEKLSLKETLTLLDGAARHNVQV-LITDSGQRTGT-- 543 G+ +VD+ S + ++D A + V + D Q Sbjct: 703 LARRDARDALKRCPTGAMYLVDEAGMASTRNLAIMVDIAEQTGGVVRFLGDPYQLDAVTT 762 Query: 544 GSALMAMKDA-------GVNTYRWQGGEQRPATIISEPDR------NVR----------- 579 G A + A V + + + + D R Sbjct: 763 GGAFAMLARATDAPELTDVVRFGTDTQQAENSLALRAGDEAALDLYEQRGWTHHHNTAGE 822 Query: 580 -YARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQG 622 + A +G S+ S E A + I++ ++ G Sbjct: 823 AIDEMVAAHLADTASGRNSIVLASTREEVAAINAQIQAHHRSGG 866 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 90/554 (16%), Positives = 166/554 (29%), Gaps = 92/554 (16%) Query: 791 SVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLE 850 ++ L R L + ++ A A H E + + S+ Sbjct: 412 ALAPEQAQGEQLLAQCRIAGREALAAISNDPDAAPDRAWHGPAAAAEEVLHKVCEQRSVW 471 Query: 851 TAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINA 910 + +A A + + E L E+ GEI Sbjct: 472 RETHLRTAAEAIIAAKLLPSGSDRRELVDTVVERA--LAESMIVGPGHELLDTTTGEIPE 529 Query: 911 QIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHI------LEGKEAVMPLMERVPGE 964 +++R + V G LL S +AE +IL + + + V Sbjct: 530 RLRRDN--GEHVLTNPGGPLLTSSRIVDAENTILDAAATPTAHVATNAVIDAGIASVEEN 587 Query: 965 LMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAV-----NMLPESERPR 1019 L +GQ R + G AG GKTT +A ++A + + + Sbjct: 588 EPFPLNAGQAELVRHFCGSGALVAAGVGPAGTGKTTSMKATVAAWTADANRLPGAAVNRQ 647 Query: 1020 VVGLGPTHRAVGEMRSA-GVDAQTLASFLHDT-------------------------QLQ 1053 V+ L P+ A ++ + T+ SF + + Sbjct: 648 VIPLAPSAVAATKLGDEIELTGNTIDSFTYWWTAMGGRETYLTAHQVLADPDAGFLARRD 707 Query: 1054 QRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFR 1113 R + ++L+DE+ M ++A + GG GD QL A+ G F Sbjct: 708 ARDALKRCPTGAMYLVDEAGMASTRNLAIMVDIAEQTGGVVRFLGDPYQLDAVTTGGAFA 767 Query: 1114 LQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPE 1173 + A D + ++VR + ++A SL R + A L ++ W Sbjct: 768 MLAR--ATDAPELTDVVRFGTDTQQAENSLALRAGDEAALDL---------YEQRGWTHH 816 Query: 1174 HSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHL 1233 H+ + +V + T R ++++ Sbjct: 817 HNT----------------------------AGEAIDEMVAAHLADTASGR-NSIVLAST 847 Query: 1234 NEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNV 1293 E+ +N+ I G T ++ DG L+ R D+ Sbjct: 848 REEVAAINAQIQAHHRSGGRAQAG-------RTVDLSDG----LAAGVGDRIVTRDNDSD 896 Query: 1294 YHRIAGISKDDGLI 1307 Y +I G + ++ Sbjct: 897 YRQIGGKRANSRVL 910 >UniRef50_A8QYS1 TraA protein n=1 Tax=Fluoribacter dumoffii RepID=A8QYS1_9GAMM Length = 889 Score = 195 bits (495), Expect = 2e-47, Method: Composition-based stats. Identities = 101/516 (19%), Positives = 189/516 (36%), Gaps = 76/516 (14%) Query: 818 LDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVES 877 + + +A P + + + + R + I+ + L + AL + Sbjct: 190 DHRSYKEQGIALEPQYKIGPKDAQERMARLADHQRIARENGQLIFEQPEI---ALDAITR 246 Query: 878 KKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASY 937 + F+ DL F + +L+Y+ + K G ++ Sbjct: 247 CQSTFTHQDLARFINRHTENAAQFNLV---FERVKLSSELVYLGLDK-DGKQRFSTQNML 302 Query: 938 EAEKSILR-----HILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQG 992 E S++ H G E + + + L+ Q +A + ++ D +++ G Sbjct: 303 HIESSMMHQSDMLHHRLGHEVCEKTV--LLAQSSRTLSEEQESALCYLTQSGDLKSLL-G 359 Query: 993 YAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA-GVDAQTLASFLHDTQ 1051 YAG GK+ A + E RV G + A +R + G++++T+AS + Sbjct: 360 YAGTGKSYLLG----AAREIWEQSGYRVHGAALSGIAALNLRDSSGIESRTIASLFYRLD 415 Query: 1052 LQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQP 1111 G S + ++DE+ M+G+ M R +A G + V GD QLQAI G Sbjct: 416 ----KGMFHFTSRDILVVDEAGMLGSRTMERLTREVAQAGAKLVLVGDWQQLQAIEAGAS 471 Query: 1112 FRLQQTRSAADVAIMKEIVRQTPELR-EAVYSLINRDVERALSGLESVKPSQVPRQEGAW 1170 FR + +I RQT + +A L V++AL ++ Sbjct: 472 FRAIAEN--YQYVELNQIRRQTTPWQVDASLDLAQGAVDKALLAYDAHD----------- 518 Query: 1171 APEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIV 1230 V F + +AK A +Q + R + +I+ Sbjct: 519 ----HVHRFISTHDAKHALIEQWNDV----------------------RIASPSDSQIIL 552 Query: 1231 THLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETH----RDA 1286 + +D + LN M ++ K G+LG++ V N+ GE + D+ Sbjct: 553 AYTRKDVKELNEMARVMKRKDGQLGEDVVF-------NMERGERAFAVNDRVYFLKREDS 605 Query: 1287 LVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPR 1322 L +++ I GI+ G+IT+ +G+ P+ Sbjct: 606 LSVINGTLGTIQGINAKSGIITVA-LDGDDLKTKPQ 640 Score = 109 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 83/626 (13%), Positives = 189/626 (30%), Gaps = 84/626 (13%) Query: 268 VDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGL 327 +D ++ + + + A +R A ++G + + A+ + Sbjct: 185 IDQKVDHRSYKEQGIALEPQYKIGPKDAQERMARLADHQRIARENGQLIFEQPEIALDAI 244 Query: 328 SERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDRE-KGLFTSGIHV 386 + + FT+ D+ EN + S + LD++ K F++ + Sbjct: 245 TRCQSTFTHQDLARFI--NRHTENAAQFNLVFERVKLSSELVYLGLDKDGKQRFSTQNML 302 Query: 387 LDELSVRALSRDIMKQ------NRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQG 440 E S+ S + + + + + S + A+ L Q +++ G Sbjct: 303 HIESSMMHQSDMLHHRLGHEVCEKTVLLAQSSRTLSEEQESALCYLTQSGDLKSLLGYAG 362 Query: 441 GAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEG--MA 498 G+ + + + G V A + +N++ + I L+ Sbjct: 363 --TGKSYLLGAAREIWEQSGYRVHGAALSGIAALNLRDSSGIESRTIASLFYRLDKGMFH 420 Query: 499 FTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR---TGTGSALMAMKDA-- 553 FT ++VD+ L + L A+ ++++ Q+ G++ A+ + Sbjct: 421 FTSRDILVVDEAGMLGSRTMERLTREVAQAGAKLVLVGDWQQLQAIEAGASFRAIAENYQ 480 Query: 554 --GVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILT 611 +N R Q + + V A LA D A + +S + L Sbjct: 481 YVELNQIRRQTTPWQVDASLDLAQGAVDKALLAYD------AHDHVHRFISTHDAKHAL- 533 Query: 612 QAIRSELKTQGVLGLPEVTMTALSPVWL-DSRSRYLRDMYRPGMVMEQWNPETRSHDRYV 670 + + V + + Y V ++ N R R Sbjct: 534 -------------------IEQWNDVRIASPSDSQIILAYTRKDV-KELNEMARVMKR-- 571 Query: 671 IDRVTAQSHSLTLRDAQ-GETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRV 729 +D Q GE V + + A +R+ + L V Sbjct: 572 -------------KDGQLGEDVVFNM----------ERGERAFAVNDRVYFLKREDSLSV 608 Query: 730 SGGDRLQVASV-SEDAMTVVVPGRAEPATLPVSDSPFT--ALKLENGWVET--PGHSVSD 784 G + + ++ + V + T P T +E+G+ T V+ Sbjct: 609 INGTLGTIQGINAKSGIITVALDGDDLKTKPQIVQVNTNYYKHMEHGYAATVYKAQGVTV 668 Query: 785 SATVFASVTQMAMDNATLNGLARSGRDVRLYSSLD----ETRTAEKLARHPSFTVVSEQI 840 ++T + R ++ S + + + L+R+ + + + Sbjct: 669 DRAYVLPTAHYDA-HSTYVAMTRHRNSCDVFVSREIFAYDKALIQALSRNRAKDITLDYT 727 Query: 841 KTRAGETSLETAISHQKSALHTPAQQ 866 + + I + L +++ Sbjct: 728 QMQGEFARQRGLILDKSPTLSISSKE 753 Score = 74.9 bits (182), Expect = 3e-11, Method: Composition-based stats. Identities = 28/170 (16%), Positives = 56/170 (32%), Gaps = 26/170 (15%) Query: 1333 TPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDS--VTLSDGQQTREIRPG---- 1386 DR+ F K + + ++ T+ ++ S +T++ + +P Sbjct: 585 ERGERAFAVNDRVYFLKREDSLSVINGTLGTIQGINAKSGIITVALDGDDLKTKPQIVQV 644 Query: 1387 QEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVY 1446 +H++ YA T + AQG + A L + YVA++R + V+ Sbjct: 645 NTNYYKHMEHGYAATVYKAQGVTVDRAYVLPTAHYDAHST------YVAMTRHRNSCDVF 698 Query: 1447 TDNR-----QGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTAREL 1491 + A++ K D + F+ R L Sbjct: 699 VSREIFAYDKALIQALSRNRAKDITLDY---------TQMQGEFARQRGL 739 >UniRef50_C7RK95 Helicase, RecD/TraA family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RK95_9PROT Length = 752 Score = 195 bits (495), Expect = 2e-47, Method: Composition-based stats. Identities = 123/645 (19%), Positives = 221/645 (34%), Gaps = 122/645 (18%) Query: 774 WVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSF 833 ++ G S + + +F + Q A+D N R +D+R L A+K+ Sbjct: 158 FLHAHGVSTARAVRIFKTYGQGAVDVVRENPY-RLAQDIRGIGFLSADTIAQKVG----- 211 Query: 834 TVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKS 893 +++ RA + IS+ AL + Q H LP E LA ++D+ Sbjct: 212 --IAKDSPLRA-----QAGISY---ALTEASAQG-HCGLPYAELVPLAVKLLDI------ 254 Query: 894 FAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHIL--EGK 951 E T + EI ++L D +G + L Y AE+S+ + Sbjct: 255 --PESIIETAIAQEIAD-----EVLVPDTVEGQPSVFLA--PLYYAEQSLAAQVRRLTTA 305 Query: 952 EAVMP------LMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAV 1005 + +P + V +L +L Q+ A R+ L + V+ G GVGKTT ++ Sbjct: 306 ASTLPDFAADKAIPWVEQKLAIELADSQKEAIRLALSA--KLLVITGGPGVGKTTLVNSI 363 Query: 1006 MSAVNMLPESERPRVVGLGPTHRAVGEM-RSAGVDAQTLASFLHDTQL---QQRSGETPD 1061 ++ +++ + + + PT RA + S G++A+T+ L L +R+ + P Sbjct: 364 LTIMSV----KGVKPLLCAPTGRAAKRLGESTGLEAKTIHRLLEVNPLNGQFKRNADNP- 418 Query: 1062 FSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAA 1121 + + DE SM+ + +A + GD DQL ++ PGQ + Sbjct: 419 LECDVLIADECSMIDVPLANQLLKAVATSTV-MILVGDVDQLPSVGPGQFLADLIDSGSV 477 Query: 1122 DVAIMKEIVRQTPELREA-VYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFS 1180 V + E+ RQ R INR V +L G + E +V + Sbjct: 478 PVIRLTEVFRQAASSRIVRSAHQINRGVFPSLPGKGEASDFYLVAAEEPEVIAQTVVDLV 537 Query: 1181 HSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVL 1240 ++ +P + VRD P R T R + Sbjct: 538 QTR--------------------LPRKFHVDPVRDIQVLCPMNRGIT--------GARGI 569 Query: 1241 NSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHR---- 1296 N + GE + + + D ++ ++N Y R Sbjct: 570 NQALQAALNPPGEHSVD------------------KFGNRFSVGDKVMQIENNYDRDVFN 611 Query: 1297 -----IAGISKDDGLITLQDAEGNTRLISPRE------------AVAEGVTLYTPDTIRV 1339 + GI +DD + + +G E A+G Y + + Sbjct: 612 GDIGFVTGIDRDDEELAV-TFDGRVVTYPFGELDELVLCYATTIHKAQGSE-YPVVVMPI 669 Query: 1340 GTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIR 1384 T M ++ G V ++ ++ + E R Sbjct: 670 STQHYMMLKRNLIYTGITRGKTLVVLVGQKRALAMAVKGKEVERR 714 Score = 73.3 bits (178), Expect = 9e-11, Method: Composition-based stats. Identities = 92/575 (16%), Positives = 167/575 (29%), Gaps = 77/575 (13%) Query: 299 ADLRTLTPGPASQDGPDVQQAVTQAIAGLSER-KVQFTYTDVLARTVGILPPENGVIERA 357 AD G A Q ++ A+ S + Y +++ V +L +IE Sbjct: 203 ADTIAQKVGIAKDSPLRAQAGISYALTEASAQGHCGLPYAELVPLAVKLLDIPESIIE-- 260 Query: 358 RAGIDEAISREQLIP--LDREKGLFTSGIHVLDELSVRALSRDIMKQNRVT--------- 406 I + I+ E L+P ++ + +F E S+ A R + Sbjct: 261 -TAIAQEIADEVLVPDTVEGQPSVFL-APLYYAEQSLAAQVRRLTTAASTLPDFAADKAI 318 Query: 407 --VHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQ 464 V + ++ +A+ LA L I G G G+ V ++ + +G + Sbjct: 319 PWVEQKLAIELADSQKEAIR-LALSAKLLVITGGPG--VGKTTLVNSILTIMSVKGVKPL 375 Query: 465 IIAADRRSQMNMKQDERLSGELITGRRQLLEG-MAFTPGS-------TVIVDQGEKLSLK 516 + A R+ + + L + I ++ F + +I D+ + + Sbjct: 376 LCAPTGRAAKRLGESTGLEAKTIHRLLEVNPLNGQFKRNADNPLECDVLIADECSMIDVP 435 Query: 517 ETLTLLDGAARHNVQVLITDSGQ--RTGTGSALMAMKDAGVNTYRWQGGEQRPATIISEP 574 LL A V +L+ D Q G G L + D+G R A Sbjct: 436 LANQLLKAVATSTVMILVGDVDQLPSVGPGQFLADLIDSGSVPVIRLTEVFRQAASSRIV 495 Query: 575 DRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTAL 634 + R G F + GE S + E ++ Q + ++T L Sbjct: 496 RSAHQINR--GVFPSLPGKGEASDFYLVAAEEPEVIAQTVVDLVQT--RLPRKFHVDPVR 551 Query: 635 SPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVR 694 L +R + R ++ + + GE Sbjct: 552 DIQVLCPMNRGIT--------------GARGINQALQAALNPP----------GEHS--- 584 Query: 695 ISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAE 754 + + +S+ G+++ V GD V + D + V Sbjct: 585 VDKFGNRFSV----------GDKVMQIENNYDRDVFNGDIGFVTGIDRDDEELAVTFDGR 634 Query: 755 PATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQ--MAMDNATLN-GLARSGRD 811 T P L L V TQ M + + G+ R Sbjct: 635 VVTYP--FGELDELVLCYATTIHKAQGSEYPVVVMPISTQHYMMLKRNLIYTGITRGKTL 692 Query: 812 VRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGE 846 V L A K ++ + G+ Sbjct: 693 VVLVGQKRALAMAVKGKEVERRWSKLKERLSMPGK 727 Score = 59.5 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 47/120 (39%), Gaps = 4/120 (3%) Query: 1338 RVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLA 1397 R GD++ +++ +R + VT + D L+ R + + ++ + L Sbjct: 591 RFSVGDKVMQIENNYDRDVFNGDIGFVTGIDRDDEELAVTFDGRVVTYPFGELDE-LVLC 649 Query: 1398 YAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAI 1457 YA T H AQG + + + +M Y ++R K + V ++ A+ Sbjct: 650 YATTIHKAQG--SEYPVVVMPISTQHYMMLKRNLIYTGITRGK-TLVVLVGQKRALAMAV 706 >UniRef50_Q6X3G0 TraA n=4 Tax=Gammaproteobacteria RepID=Q6X3G0_PSEAE Length = 1173 Score = 195 bits (494), Expect = 2e-47, Method: Composition-based stats. Identities = 160/927 (17%), Positives = 291/927 (31%), Gaps = 125/927 (13%) Query: 872 LPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLL 931 L + + + F+ D+ E + + F L + K L+ ++ A G Sbjct: 315 LDKLTATQAVFTRRDIAAELNRYIDDADQFQGL---LARLEKSPLLVEMEPANGRDPAKF 371 Query: 932 VSRASYEAEKSIL----RHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRF 987 +R + E+ ++ R G+ V + + L++ Q+ A R +L+ Sbjct: 372 STREMIDTERGMVDSAERLARTGRHGVSGPITNAAIDGAGTLSAEQQNAVRHVLK-PGSL 430 Query: 988 TVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMR-SAGVDAQTLASF 1046 VV G AG GK+ + A +++ V G +A E++ +G+D++TLAS Sbjct: 431 AVVIGDAGTGKSFSMKVAREA----WQAQGFNVRGAALAGKAADELQAGSGIDSRTLASL 486 Query: 1047 LHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAI 1106 + ++G+ S + ++DE+ M+G+ + R G + V GD QL AI Sbjct: 487 ----EFAWKNGKDKLTSRDVLVIDEAGMIGSRQLGRVLKAAEQAGAKVVLLGDDKQLAAI 542 Query: 1107 APGQPFRLQQTRSAADVAIMKEIVRQTPEL-REAVYSLINRDVERALSGLESVKPSQVPR 1165 G FR A A + E+ RQ R A L V L+ Sbjct: 543 EAGAAFRGVVQHVGA--AEITEVRRQKEAWARAAGQELARGSVADGLAAY---------- 590 Query: 1166 QEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEARE 1225 A D +++ Y G + + Sbjct: 591 ----------------------------AERGHVKIHDSRDAARDSLAAAYVG--DQGKG 620 Query: 1226 QTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRD 1285 +I+ H N+D + LN + + R++ GEL + G+ R+ + RD Sbjct: 621 SQIILAHSNKDVQALNEAVREARKERGELRGTARFMTERGGREFAPGD--RIVFLKNDRD 678 Query: 1286 ALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRM 1345 L + + + +DG + ++ G R + A TI G + Sbjct: 679 -LGVKNGTLGTVE--RAEDGSLAVRLDSGEARRFQAAQYAAVDHGYAV--TIHKAQGVTV 733 Query: 1346 RFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLA-------- 1397 G + + ++ TL G +A + +D Sbjct: 734 DRAYLLATPGMDRSLAYVGMTRHREAATLFAGAD----DFTDRRAGRLVDHGAAPYENKP 789 Query: 1398 -----YAITA-------HGAQGASETFAIALEGTE-GNRKLMAGFESAYV------ALSR 1438 Y T H G AIA G + G+R + S V R Sbjct: 790 ENRASYFATLENDNGERHTIWGVDLERAIAASGAKRGDRIGLEHGGSETVRLPDGTTAER 849 Query: 1439 MKQHVQVYTD-NRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAG 1497 HV+ + + K + D + + R R AG Sbjct: 850 NTWHVRGAAELAAGKLAQVLGRERPKESTLDFADRRGFDGESVVRRWLERGRAKVAELAG 909 Query: 1498 -------RAVLRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDD 1550 R + R + P + PQ P ++ ++A I Sbjct: 910 KMRDGLRRNLERHGRPDLMPATDIAGTPTVQRPQQNERTPEDEKKRRAAEIAAKFRQQVS 969 Query: 1551 GNGLRGFSGEGRVKGSGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIAGE 1610 + + R + A E A + +A+ AG+ Sbjct: 970 EERGEQAAPQQRPQAERPAPDPLAGFRAGVERAEAAGGGLALDVAKAQLAVAQEFHAAGK 1029 Query: 1611 GRPWNPGAITGGRVWGDIPDNSVQPGAGNGEPVTAEVLAQRQAEEAIRRETERRADEIVR 1670 + AI + AG +P A+ +R A + + +RA+ R Sbjct: 1030 DPRHHSAAIMQEGQQ--------RAFAGLAQPSQAKAEPERLAAVQVSEQDRKRAEMNAR 1081 Query: 1671 KMAENKPDLPDG----------KTEQAVREIAGQERDRAAITEREAALPEGVLREPQRVR 1720 + L G ++ + + G+ R+R + V + + Sbjct: 1082 QEVSRFKTLAAGRRNGIAGYTDRSPSKWQALPGELRERIERFNAMPKERQAVELDKMQRE 1141 Query: 1721 EAVREIAR-ENLLQERLQQMERDMVRD 1746 A R + + + R QQ E++ RD Sbjct: 1142 LADRYARNPQEITRSRQQQREQERGRD 1168 Score = 83.0 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 57/448 (12%), Positives = 137/448 (30%), Gaps = 65/448 (14%) Query: 298 RADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERA 357 AD + + + + + L+ + FT D+ A + ++ Sbjct: 289 EADRIDIHNADRQEQARQIVERPEIILDKLTATQAVFTRRDIAAELNRYIDD----ADQF 344 Query: 358 RAGIDEAISREQLIPLDREKGL----FTSGIHVLDELSVRALSRDIMKQNRVTVHP---- 409 + + L+ ++ G F++ + E + + + + R V Sbjct: 345 QGLLARLEKSPLLVEMEPANGRDPAKFSTREMIDTERGMVDSAERLARTGRHGVSGPITN 404 Query: 410 ---EKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQII 466 + + +A +AV + + SLA+V G G G+ + + QG V+ Sbjct: 405 AAIDGAGTLSAEQQNAVRHVLKP-GSLAVVIGDAG-TGKSFSMKVAREAWQAQGFNVRGA 462 Query: 467 AADRRSQMNMKQDERLSGELITGRR--QLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDG 524 A ++ ++ + + T +++D+ + ++ +L Sbjct: 463 ALAGKAADELQAGSGIDSRTLASLEFAWKNGKDKLTSRDVLVIDEAGMIGSRQLGRVLKA 522 Query: 525 AARHNVQVLITDSGQRTGTGSALMAMK-------DAGVNTYRWQGGEQRPAT-------- 569 A + +V++ ++ A A + A + R Q A Sbjct: 523 AEQAGAKVVLLGDDKQLAAIEAGAAFRGVVQHVGAAEITEVRRQKEAWARAAGQELARGS 582 Query: 570 ------------IISEPDRNVRYAR-LAGDFAASVKAGEESVAQVSGVREQAILTQAIRS 616 + D LA + G + ++ L +A+R Sbjct: 583 VADGLAAYAERGHVKIHDSRDAARDSLAAAYVGDQGKG-SQIILAHSNKDVQALNEAVRE 641 Query: 617 ELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPET----RSHDRYVID 672 K +G L + ++ + PG + + ++ ++ Sbjct: 642 ARKERGELRG--------TARFMTE---RGGREFAPGDRIVFLKNDRDLGVKNGTLGTVE 690 Query: 673 RVTAQSHSLTLRDAQGETQVVRISSLDS 700 R A+ SL +R GE + + + + Sbjct: 691 R--AEDGSLAVRLDSGEARRFQAAQYAA 716 >UniRef50_C4XNH4 Conjugal transfer protein TraA n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XNH4_DESMR Length = 947 Score = 193 bits (490), Expect = 6e-47, Method: Composition-based stats. Identities = 87/443 (19%), Positives = 153/443 (34%), Gaps = 62/443 (13%) Query: 817 SLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVE 876 + TA H + A + + + H +A+ Sbjct: 211 DIKVDPTAAISQVHEGKARHIKNSAKVAENQTRLEELQNIARNDHPAILEALVY------ 264 Query: 877 SKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRAS 936 ++ F++ DL K E E+ + A +K + + + A G + SR Sbjct: 265 -RQTTFNVRDLNKTLKKHGIEDDDEREVL--VEAILKNAECVPLFNAFGEEANVYTSRKV 321 Query: 937 YEAEKSILRH---ILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGY 993 E +IL + ILEGK R + L + QR A ++ +R V+QG Sbjct: 322 RAEEAAILGNVGKILEGKGGAASAKSRAAALASKTLDTEQREAFD-VMTAENRLCVIQGR 380 Query: 994 AGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGV-DAQTLASFLHDTQL 1052 AG GK+ A A E++ RVVGL PT+ +M G +A TL S L + Sbjct: 381 AGAGKSYTMGAAREAF----EADGWRVVGLAPTNAVSRDMAKDGFKEASTLHSELLKQEN 436 Query: 1053 QQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPF 1112 ++ P T+ +DE++M+ N+ + R G + V GD QL ++ G + Sbjct: 437 PKKK-TVPWDETTVVFVDEAAMMDNSILLRLTDHAERTGAKLVLIGDDAQLSSVQRGGMY 495 Query: 1113 RLQQTRSAADVAIMKEIVRQTPE-LREAVYSLINRDVERALSGLESVKPSQVPRQEGAWA 1171 +TR++ +++ ++ RQ E + +A +L + + A+ Sbjct: 496 SEIRTRTSE--SLISQVRRQKEEWMIKASMNLADGRIGEAIEAYNK-------------- 539 Query: 1172 PEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVT 1231 D L E D R + Sbjct: 540 -----------------------NGHIIPSNDPIKELLEQWKTDALNNPSVNR---FVYA 573 Query: 1232 HLNEDRRVLNSMIHDVREKAGEL 1254 N + +N + +AG + Sbjct: 574 GTNAEVNAINDACSEAMREAGHV 596 Score = 95.7 bits (236), Expect = 2e-17, Method: Composition-based stats. Identities = 83/648 (12%), Positives = 176/648 (27%), Gaps = 84/648 (12%) Query: 293 DAADQRADLRTLTPGPASQDGPDVQQAVTQAI-AGLSERKVQFTYTDVLARTVGILPPEN 351 A + + ++ ++ + AI L R+ F D+ ++ Sbjct: 227 KARHIKNSAKVAENQTRLEELQNIARNDHPAILEALVYRQTTFNVRDLNKTLKKHGIEDD 286 Query: 352 GVIERARAGIDEAISREQLIPL----DREKGLFTSGIHVLDELSVRALS------RDIMK 401 + ++ + + +PL E ++TS +E ++ + Sbjct: 287 ---DEREVLVEAILKNAECVPLFNAFGEEANVYTSRKVRAEEAAILGNVGKILEGKGGAA 343 Query: 402 QNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGR 461 + S +A + L ++ G+ G AG+ + G Sbjct: 344 SAKSRAAALASKTLDTEQREAFD-VMTAENRLCVIQGRAG-AGKSYTMGAAREAFEADGW 401 Query: 462 EVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFT-----PGSTVIVDQGEKLSLK 516 V +A +M +D + E + V VD+ + Sbjct: 402 RVVGLAPTNAVSRDMAKDGFKEASTLHSELLKQENPKKKTVPWDETTVVFVDEAAMMDNS 461 Query: 517 ETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDR 576 L L D A R ++++ + L +++ G+ + Sbjct: 462 ILLRLTDHAERTGAKLVLIGDDAQ------LSSVQRGGMYS------------------- 496 Query: 577 NVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSP 636 +R + + EE + + S + +AI G + + L Sbjct: 497 EIRTRTSESLISQVRRQKEEWMIKASMNLADGRIGEAI-EAYNKNGHIIPSNDPIKELLE 555 Query: 637 VWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSL-----TLRDAQGETQ 691 W S +R+V A+ +++ G Sbjct: 556 QWKTDA------------------LNNPSVNRFVYAGTNAEVNAINDACSEAMREAGHVI 597 Query: 692 VVRISSLDSSWSLFRPEKMPVADGERLR--VTGKIPGLRVSGGDRLQVASVSEDAMTVVV 749 F+ G+RL+ T K + G V ++S+D +TV+ Sbjct: 598 GAFEFICKKGDLAFQQT---FGVGDRLQINATAKNINSDLINGSFGTVQNISDDEITVLF 654 Query: 750 PGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSAT-VFASVTQMAMDNATLNGLARS 808 V+ P G+ T + T V+A + T G R Sbjct: 655 DTGQI-----VTWKPSEFNGFALGYAGTVYKGQGKTQTDVYALHGSTWDNRTTYVGATRH 709 Query: 809 GRDVRLYSSLDETRTAEKLAR---HPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQ 865 + RLY ++ ++ E L + + ++ + + Sbjct: 710 KGNFRLYVDKNKVKSLESLVKGMSRSKSSGTTQSYYDANQILDRQQRVEKMNGKEFEKFG 769 Query: 866 QAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIK 913 L K + L A + G ++ + I Sbjct: 770 LYSMLKTKHDVEIKHKEKLPRLAIVALELSNYGLSKKDIAHCLEHDID 817 Score = 79.1 bits (193), Expect = 2e-12, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 61/167 (36%), Gaps = 18/167 (10%) Query: 1336 TIRVGTGDRMRF--TKSDRERGYVANSVWTVTAVSGDSVT-LSDGQQTREIRPGQEQAEQ 1392 G GDR++ T + + S TV +S D +T L D Q +P + Sbjct: 612 QQTFGVGDRLQINATAKNINSDLINGSFGTVQNISDDEITVLFDTGQIVTWKPSEFNG-- 669 Query: 1393 HIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTD---- 1448 L YA T + QG ++T AL G+ + + YV +R K + ++Y D Sbjct: 670 -FALGYAGTVYKGQGKTQTDVYALHGSTWDNRTT------YVGATRHKGNFRLYVDKNKV 722 Query: 1449 -NRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDV 1494 + + ++ + GT ++ + +E Sbjct: 723 KSLESLVKGMSRSKSSGTTQSYYDANQILDRQQ-RVEKMNGKEFEKF 768 >UniRef50_B7KWK3 Helicase, RecD/TraA family n=16 Tax=Bacteria RepID=B7KWK3_METC4 Length = 750 Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats. Identities = 87/379 (22%), Positives = 146/379 (38%), Gaps = 51/379 (13%) Query: 774 WVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSF 833 ++ G + + +F + ++ T + R RD+R A KL Sbjct: 169 FLHAHGVGTARAVRIFKTYGHESIKVMTEDPY-RLARDIRGIGFKTADAIAMKLG----- 222 Query: 834 TVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKS 893 T+ L +S AL T + H ALPV +LA ++++ Sbjct: 223 -------LTKEAPQRLRAGVSF---ALQTAMDEG-HCALPVARLTELAQKLLEVEAPL-- 269 Query: 894 FAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEA 953 + + +I+RGD + D+ L R + AE+ I ++E Sbjct: 270 ----------IRSAVAEEIERGDEVIQDIIGDQACVFL--RGLHAAERGIADRLIERASG 317 Query: 954 VMPLME--------RVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAV 1005 P E V + + L+ Q A R++L + + V+ G GVGKT+ +V Sbjct: 318 TPPWSEIDLGKALPWVEQKTGKALSPSQAEAVRLLLAS--KLCVITGGPGVGKTSTLDSV 375 Query: 1006 MSAVNMLPESERPRVVGLGPTHRAVGEM-RSAGVDAQTLASFLH---DTQLQQRSGETPD 1061 + + +++ V+ PT RA M G++A+T+ L R E+P Sbjct: 376 LRIL----QAKGVHVLLAAPTGRAAKRMTEQTGLEAKTIHRLLEIDPKHGGFTRDEESP- 430 Query: 1062 FSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAA 1121 + L ++DE+SMV M + G + GD DQL ++ PGQ Sbjct: 431 LNCDLLVIDETSMVDVPLMNALLKAVPPRAG-LLLVGDVDQLPSVGPGQVLADVIASERV 489 Query: 1122 DVAIMKEIVRQTPELREAV 1140 VA + E+ RQ E R V Sbjct: 490 PVARLTEVFRQAAESRIIV 508 Score = 65.6 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 47/279 (16%), Positives = 95/279 (34%), Gaps = 28/279 (10%) Query: 288 IRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIA-GLSERKVQFTYTDVLARTVGI 346 R R + AD + G + ++ V+ A+ + E + + Sbjct: 203 ARDIRGIGFKTADAIAMKLGLTKEAPQRLRAGVSFALQTAMDEGHCALPVARLTELAQKL 262 Query: 347 LPPENGVIERARAGIDEAISREQLIPLDRE--------KGLFTSGIHVLDELSVRAL--- 395 L E +I R+ + E I R + D +GL + + D L RA Sbjct: 263 LEVEAPLI---RSAVAEEIERGDEVIQDIIGDQACVFLRGLHAAERGIADRLIERASGTP 319 Query: 396 --SRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELV 453 S + + V + + ++AV +L + + I G G G+ + ++ Sbjct: 320 PWSEIDLGKALPWVEQKTGKALSPSQAEAVRLLLASKLCV-ITGGPG--VGKTSTLDSVL 376 Query: 454 MMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLL-EGMAFTPGS-------TV 505 + + +G V + A R+ M + L + I ++ + FT + Sbjct: 377 RILQAKGVHVLLAAPTGRAAKRMTEQTGLEAKTIHRLLEIDPKHGGFTRDEESPLNCDLL 436 Query: 506 IVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTG 544 ++D+ + + LL +L+ D Q G Sbjct: 437 VIDETSMVDVPLMNALLKAVPPRAGLLLVGDVDQLPSVG 475 Score = 57.6 bits (137), Expect = 4e-06, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 43/109 (39%), Gaps = 3/109 (2%) Query: 1338 RVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLA 1397 R GDR+ T++D +R + V + D + RE+ + + + A Sbjct: 603 RFAPGDRVMETQNDYDREVFNGDLGMVARIDDDEGAVIVTFDDREVIYPFGELDT-LVPA 661 Query: 1398 YAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVY 1446 +A T H +QG+ + T+ M Y ++R KQ V + Sbjct: 662 FATTIHKSQGSEYPAVVIPIVTQ--HFNMLARNLLYTGVTRGKQLVVLI 708 >UniRef50_Q6LR56 Putative ATP-dependent exoDNAse (Exonuclease V), alpha subunit n=1 Tax=Photobacterium profundum RepID=Q6LR56_PHOPR Length = 723 Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats. Identities = 117/614 (19%), Positives = 191/614 (31%), Gaps = 153/614 (24%) Query: 869 HLALPVVESK-KLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYG 927 LP+V + KL + DL A S A GFT EIN + G L++++ Sbjct: 253 DQVLPLVRKRLKLDVNEFDLTESAMSLAVRKFGFT----EINGRFHHGTYLFMEMVI--- 305 Query: 928 TGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRF 987 T S S +AE + L E + ME P LT Q A LE + Sbjct: 306 THRFKSMLSKKAEWTDLH-----PEVINKAMENNPFS----LTEKQAEAVFKALEYN--L 354 Query: 988 TVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA-GVDAQTLASF 1046 + G AG GKTT R V+ A + L + + +A ++ + G T+A F Sbjct: 355 ATIIGGAGTGKTTVLRTVLRAFHEL----GYNIHAVALAGKAAMTLKKSVGFQTSTIARF 410 Query: 1047 LHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAI 1106 L L + + ++DE+SMV M + L + R + GD +QL +I Sbjct: 411 LGQKPLVE--------GKHVVIIDEASMVDLPTMFQIV-LHCSPDVRFILVGDDNQLASI 461 Query: 1107 APGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQ 1166 G V + + RQ VYS + +D Sbjct: 462 RAGLVLTDMVRSGVIPVTELDIVQRQEGTTGIPVYSALIKD------------------- 502 Query: 1167 EGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQ 1226 P T H E + P + +A Y ++ Sbjct: 503 --GIVPSELTTGNIHFHECQ------------------PTRIIDACANLYAEDPLNSQ-- 540 Query: 1227 TLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDA 1286 I+ N+ + +N + + E I D R+ T D Sbjct: 541 --IIVATNDMKDAINKYCQNTFNGSAE-------------PLIVDMGYRKFGTKFRKGDP 585 Query: 1287 LVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMR 1346 ++ N Y + +G + G ++P E Sbjct: 586 VIFTKNNY----EVDIQNGTL------GKLISVTPDEKK--------------------- 614 Query: 1347 FTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQ 1406 S V G +V L+ ++ +DLAY IT H Q Sbjct: 615 ------------GSFGEVVLNGGRTVLLT------------QELLAKLDLAYGITLHKGQ 650 Query: 1407 GASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAI----NNAVQ 1462 G+ I G + Y ++R + + ++ + AI + Sbjct: 651 GSQFKRVIVAVENSG----LVDRSWVYTGITRAEVELHLFGEEY-KLISAITGLSAKYKR 705 Query: 1463 KGTAHDVFEPKPDR 1476 + D+ + +R Sbjct: 706 QTYLADLLKEHIER 719 Score = 71.4 bits (173), Expect = 3e-10, Method: Composition-based stats. Identities = 59/409 (14%), Positives = 124/409 (30%), Gaps = 32/409 (7%) Query: 176 SSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVEAFS 235 S + + G + A + L+ + + +E L T K + G E F Sbjct: 108 DSKEFYRIGRKTMMDAQDVLREELFPSIINKDLEKL--RTAFTDKQVETLINGF--ERFE 163 Query: 236 GRSQTIREAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAA 295 +I + + + + +K +IK + L G A Sbjct: 164 NLRHSI--WLSQHHIPPNIQQKLF--KLNKSFDPRDIKNNPY--ELVTLGLSFEQADKIA 217 Query: 296 DQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQF-TYTDVLARTVGILPPENGVI 354 + P + A A+ +S+ + T VL L + Sbjct: 218 KESFGFTEDHP-------YRLIGATNDALKSISKWGNTWATADQVLPLVRKRLKLDVNEF 270 Query: 355 ERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVP 414 + + + A+ + G F G ++ E+ + + ++ + V Sbjct: 271 DLTESAMSLAVRK---FGFTEINGRFHHGTYLFMEMVITHRFKSMLSKKAEWTDLHPEVI 327 Query: 415 RTAGYSDAVSVLAQDRPSL------AIVSGQGGAA-GQRERVAELVMMAREQGREVQIIA 467 A ++ S+ + ++ + + GGA G+ + ++ E G + +A Sbjct: 328 NKAMENNPFSLTEKQAEAVFKALEYNLATIIGGAGTGKTTVLRTVLRAFHELGYNIHAVA 387 Query: 468 ADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAAR 527 ++ M +K+ I + VI+D+ + L ++ + Sbjct: 388 LAGKAAMTLKKSVGFQTSTIARFLG--QKPLVEGKHVVIIDEASMVDLPTMFQIVLHCSP 445 Query: 528 HNVQVLITDSGQ--RTGTGSALMAMKDAGVNTYRWQGGEQRPATIISEP 574 +L+ D Q G L M +GV QR P Sbjct: 446 DVRFILVGDDNQLASIRAGLVLTDMVRSGVIPVTELDIVQRQEGTTGIP 494 >UniRef50_B9K371 Ti-type conjugative transfer relaxase TraA n=2 Tax=Bacteria RepID=B9K371_AGRVS Length = 1356 Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats. Identities = 109/534 (20%), Positives = 190/534 (35%), Gaps = 76/534 (14%) Query: 805 LARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPA 864 L +G D+ + + + P+ + + + A+ ++ LH A Sbjct: 206 LRLNGHDIHV---DGRSYAERGIGLVPTPHIGVSTKNIQREAEAQSRAVDLERLTLHQAA 262 Query: 865 QQAIHLALPV--------VESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEI--NAQIKR 914 ++ + + +K F D+ + + F L I + ++ Sbjct: 263 RRENARRIEQRPEIVLDAISWEKSVFDERDISKYLHRYIDDAGQFANLMARILQSPELSL 322 Query: 915 GDLLYVDVAKGYGT-GLLVSRASYE-----AEKSILRHILEGKEAVMPLMERVPGELMEK 968 + VD A G +R AE++ IL G V K Sbjct: 323 LEAEEVDFATGEVLPNRYATRDMIRIEADMAEQASRLSILSGFGVSRSTRGEVLAANG-K 381 Query: 969 LTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHR 1028 L+ Q+ A I +R ++V G AG GKTT + A + E+ +VVG + Sbjct: 382 LSDEQKVAVERI-TGDERLSLVVGRAGAGKTTMMK----AAREVWEANGYKVVGGALAGK 436 Query: 1029 AVGEMR-SAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALI 1087 A + AG+ ++TLAS+ QLQ + G T+F++DE+ MV + MA + I Sbjct: 437 AAEGLEKEAGIKSRTLASW----QLQWKEGRAALDDKTVFVIDEAGMVASRQMAEFVSAI 492 Query: 1088 AAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPE-LREAVYSLINR 1146 G + V GD DQLQ I G FR A + I RQ + +R A L Sbjct: 493 DRAGAKLVLVGDADQLQPIEAGGAFRKLADNIG--YAELGTIWRQRQQWMRHASMDLARG 550 Query: 1147 DVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPM 1206 +V AL+ + + EA KA Sbjct: 551 NVREALTAY--------------------------HERGHVKEATTKA------------ 572 Query: 1207 TLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNT 1266 A+V+D+ AR +LI+ ++ +D R LN ++ G + + Sbjct: 573 DTIAALVKDWIADYDPAR-SSLILAYMRKDVRALNEQARAALQERGIIAQGTEFRTEDGM 631 Query: 1267 ANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLIS 1320 N G+ + + +L +++ + R+ K ++ +E I Sbjct: 632 RNFSPGDQI---VFLKNEKSLGVMNGMIARVVVAEKGK-IVAEVGSENRRVEID 681 Score = 87.6 bits (215), Expect = 4e-15, Method: Composition-based stats. Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 7/110 (6%) Query: 1337 IRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDL 1396 GD++ F K+++ G + + V + G + R + Q +++D Sbjct: 632 RNFSPGDQIVFLKNEKSLGVMNGMIARVVVAEKGKIVAEVGSENRRVEIDQ-AFYRNVDH 690 Query: 1397 AYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVY 1446 YA T H +QGA+ L + +R L YVAL+R + V++Y Sbjct: 691 GYATTIHKSQGATADRVKVLASSMFDRHLS------YVALTRHRDSVELY 734 Score = 82.6 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 58/401 (14%), Positives = 128/401 (31%), Gaps = 54/401 (13%) Query: 267 HVDPEIKMAEWMQTLKETGFDIRAYR-DAADQRADLRTLTPGPASQDGPDVQQAVTQAIA 325 H+ K + + D+ A +R + R + P V A++ + Sbjct: 232 HIGVSTKNIQREAEAQSRAVDLERLTLHQAARRENARRIEQRPE-----IVLDAISWEKS 286 Query: 326 GLSERKVQ---FTYTDVLARTVGILPPENGVIERARAGIDEAI-SREQLIPLDREKGLFT 381 ER + Y D + ++ E + +E + +++P + Sbjct: 287 VFDERDISKYLHRYIDDAGQFANLMARILQSPELSLLEAEEVDFATGEVLP-----NRYA 341 Query: 382 SGIHVLDELSVRALSRDIMKQNRVTVHPE-------KSVPRTAGYSDAVSVLAQDRPSLA 434 + + E + + + + V + + AV + D L+ Sbjct: 342 TRDMIRIEADMAEQASRLSILSGFGVSRSTRGEVLAANGKLSDEQKVAVERITGD-ERLS 400 Query: 435 IVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITG-RRQL 493 +V G+ G AG+ + + G +V A ++ ++++ + + + Q Sbjct: 401 LVVGRAG-AGKTTMMKAAREVWEANGYKVVGGALAGKAAEGLEKEAGIKSRTLASWQLQW 459 Query: 494 LEGMAFTPGSTVIV-DQGEKLSLKETLTLLDGAARHNVQVLITDSG---QRTGTGSALMA 549 EG A TV V D+ ++ ++ + R ++++ Q G A Sbjct: 460 KEGRAALDDKTVFVIDEAGMVASRQMAEFVSAIDRAGAKLVLVGDADQLQPIEAGGAFRK 519 Query: 550 MKD----AGVNTYRWQGGEQRPATIISEPDRNVR---------------------YARLA 584 + D A + T Q + + NVR A L Sbjct: 520 LADNIGYAELGTIWRQRQQWMRHASMDLARGNVREALTAYHERGHVKEATTKADTIAALV 579 Query: 585 GDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLG 625 D+ A S+ ++ L + R+ L+ +G++ Sbjct: 580 KDWIADYDPARSSLILAYMRKDVRALNEQARAALQERGIIA 620 >UniRef50_Q58IS3 Putative uncharacterized protein n=2 Tax=Streptomyces RepID=Q58IS3_9ACTO Length = 1379 Score = 188 bits (477), Expect = 2e-45, Method: Composition-based stats. Identities = 105/565 (18%), Positives = 196/565 (34%), Gaps = 61/565 (10%) Query: 74 NRHRPGYDLTFSAPKSVSMMAMLGG---DKRLIDAHNQAVDFAVRQVEALASTRVM-TDG 129 + G+DL PKS S++ L ++ L D +QA RQ+E A V DG Sbjct: 199 DDRVRGWDLVLDLPKSDSVLQGLMDALSEQELRDLVHQAKRDTFRQLEKWAGYAVGSKDG 258 Query: 130 QSETVLTGNLVMALFNHDTSRD------QEPQLHTHAVVANVT-QHNGEWKTLSSDKVGK 182 + + TG L+ H ++R +P LH H +AN+ +G W+++++ Sbjct: 259 EPVRLATGGLLAWSVEHQSARPIRAGEPGDPHLHLHVTIANMALCSDGAWRSIANSG--- 315 Query: 183 TGFIENVYANQIAFGRLYREKLKEQV-EALGYETEVVGKHGMWEMPGVPVEA---FSGRS 238 ++++ + A ++ +++ E G E G WE+ GVP E FS R+ Sbjct: 316 ----QDLHRHASAADAYFKARVRYLTYERFGVRRERNESTGGWEVRGVPEELRDVFSRRA 371 Query: 239 QTIREAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYR------ 292 + E G DAS + A+++T++ K VD W + ++ D+ A Sbjct: 372 AIVEEKAGADASRTEKQAASMETKRDKVDVDATTMRDSWRRRAEQVVGDVDAMVDAAAPG 431 Query: 293 -DAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPE- 350 D A + GP D+ V GL+ F+ +LA L Sbjct: 432 PPGPDGGAGIDGPGTGPRVPPPGDIAAVVFDPKTGLTANDKTFSRAQLLAAVANALEFGI 491 Query: 351 NGVIERARAGIDEAISREQLIPLDREKG--------LFTSGIHVLDELSVRALSRDIMKQ 402 + + D+ ++ E G +T+ + E VR + + Sbjct: 492 DADPDSLELLCDDVLAVEGYAVRVPTIGSTVMSSVDRYTTQDILEAEEGVRTEALERFDS 551 Query: 403 NRVTVHPEKSVP------------RTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVA 450 + + +++ + AV+ + + + G G AG+ + Sbjct: 552 GALQLTADQAAAAIDVFQVAAGFELSEEQRAAVTRVLTAGHGIDAIVGVAG-AGKSTLME 610 Query: 451 ELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPG-STVIVDQ 509 + G + N+ + + +E G ++VD+ Sbjct: 611 ACRIGWDATGTTYAGATLAAVAAKNLTDASGIPARTVAAWLGEIENGNGLRGIDVLVVDE 670 Query: 510 GEKLSLKETLTLLDGAARHNVQVL-ITDSGQRTGTG------SALMAMKDAGVNTYRWQ- 561 + + L+ AAR +V+ I D Q G + + R Q Sbjct: 671 ATMVDDRAAAVLVTEAARTGTKVVGIGDHLQLQAIGPGGWFREVHRLVHGLTLTENRRQE 730 Query: 562 -GGEQRPATIISEPDRNVRYARLAG 585 E+ + D + LA Sbjct: 731 DAAERAALEVWRTGDHELALRMLAE 755 Score = 126 bits (316), Expect = 9e-27, Method: Composition-based stats. Identities = 91/524 (17%), Positives = 153/524 (29%), Gaps = 110/524 (20%) Query: 929 GLLVSRASYEAEKSILRHILE---------GKEAVMPLMERVPGELMEKLTSGQRAATRM 979 ++ EAE+ + LE + ++ +L+ QRAA Sbjct: 527 DRYTTQDILEAEEGVRTEALERFDSGALQLTADQAAAAIDVFQVAAGFELSEEQRAAVTR 586 Query: 980 ILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA-GV 1038 +L + G AG GK+T A + ++ G A + A G+ Sbjct: 587 VLTAGHGIDAIVGVAGAGKSTLM----EACRIGWDATGTTYAGATLAAVAAKNLTDASGI 642 Query: 1039 DAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASG 1098 A+T+A++L + + + ++DE++MV + A A G + V G Sbjct: 643 PARTVAAWLGEIE-----NGNGLRGIDVLVVDEATMVDDRAAAVLVTEAARTGTKVVGIG 697 Query: 1099 DTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESV 1158 D QLQAI PG FR + E RQ A AL + Sbjct: 698 DHLQLQAIGPGGWFREVHRLVHGLT--LTENRRQEDAAERA-----------ALEVWRTG 744 Query: 1159 KPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTG 1218 R H ++ L + + + D+ + Sbjct: 745 DHELALRMLAEGGRLHPAETAEEARSQILMAWDELRLQEWADPHDLIANM---------- 794 Query: 1219 RTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLS 1278 +++ N D LN +R +AGELG E Sbjct: 795 ---------VVLAARNSDVDALNLGAQAIRREAGELGDEHTY------------------ 827 Query: 1279 TWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIR 1338 D L L R+ + + EG L + AV + + I Sbjct: 828 -ALPGGDTLTLAVGDIVRV-----RENDYRSRRGEGPDML-NGYRAVITAMDDHHRVEIT 880 Query: 1339 VGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAY 1398 D E G+V T A + L Y Sbjct: 881 WRVKDAKAPGGYRHESGWVTPQKVTGGA---------------------------LSLGY 913 Query: 1399 AITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQH 1442 A+T +QG + ++ A + Y ++R ++ Sbjct: 914 AMTIAASQGLTCNTSLMYGHG-------ANAFATYPGITRARRQ 950 >UniRef50_C7Q5H7 TrwC relaxase n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q5H7_CATAD Length = 1386 Score = 188 bits (476), Expect = 3e-45, Method: Composition-based stats. Identities = 107/588 (18%), Positives = 184/588 (31%), Gaps = 107/588 (18%) Query: 58 GRLPDGADLSRMQDGSNRH----RPGYDLTFSAPKSVSMMAMLGGDKR------LIDAHN 107 GR P A++ ++ +R G+DL F+ KS +++ L D+R + +AH Sbjct: 141 GRAPTEAEIKKIHTEESRRARAAVAGFDLVFAPVKSAALVWAL--DERPEVRAAVREAHE 198 Query: 108 QAVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ 167 A D A+ +E A+ G + T LV A F+H SR +P LHTH +++ Q Sbjct: 199 AARDAALEILETHAAYTRTGRGGIAQIETRGLVAARFDHFDSRAGDPNLHTHVAISSKVQ 258 Query: 168 H-NGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQV-EALGYETEVV-----GK 220 +G W++L + +Y +A Y + + ++ G + Sbjct: 259 GVDGIWRSLDA---------RALYKMTVAVSEFYNTRFETELTTRTGVSWTERPDTTGKR 309 Query: 221 HGMWEMPGVP---VEAFSGRSQTIRE-----------AVGEDASLK----SRDVAALDTR 262 + E+ G+ V FS R I G D S A L+TR Sbjct: 310 EPVREIAGIDPKMVAHFSSRRTEIEARYEQLLRGFRREHGYDPSRAVCHDLARQANLETR 369 Query: 263 KSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQ 322 + K+ +M E + F +A RD D DV Sbjct: 370 EGKKAPRSLAEMREDWRVSLTDTFGRKAVRDLMAAVPGT-AAEQAAKKADPVDVDAIAAA 428 Query: 323 AIAGLSERKVQFTYTDVLARTVGILPPENGVI------ERARAGIDEAISREQLIPLDR- 375 + + + + +T ++ A E+GV E A + A+S I +D Sbjct: 429 VVDRVGQNRSTWTVWNLRAEAERAARIEHGVSTPAEHQELVSAIVAAAVSPAHSIRVDAP 488 Query: 376 ---------------------EKGLFTSGIHVLDELSVRALSRDIMKQNRVTVH------ 408 FTS + E + + Sbjct: 489 ALLDEPASLRRADRESVFTEHGAAKFTSAAILAAETRLVEAATTRTAFGATAARVGAVLD 548 Query: 409 ---PEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQI 465 V AG + A D + G G +G+ + G+ + Sbjct: 549 GFEARSGVRLDAGQHHMATAFAVDDRLVVAGIGPAG-SGKTTAMRAYAEAVAASGQRLIP 607 Query: 466 IAADRRSQMNMKQDERLSGELITGRRQ----------------------LLEGMAFTPGS 503 +A + + +D E + G A PG Sbjct: 608 LATSSAAADVLARDLGAKAENLHKFLHEYSDAPTAGASKALWNGTGIPAWARGFALRPGD 667 Query: 504 TVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMK 551 V+VD+ L+ AA V + ++ G + A++ Sbjct: 668 VVLVDEAGMAGTFNLDRLVQIAAHRGAVVRLLGDYRQLGAVESGGALR 715 Score = 103 bits (257), Expect = 5e-20, Method: Composition-based stats. Identities = 85/482 (17%), Positives = 147/482 (30%), Gaps = 35/482 (7%) Query: 924 KGYGTGLLVSRASYEAEKSILRHIL------EGKEAVMPLMERVPGELMEKLTSGQRAAT 977 +G S A AE ++ V +++ +L +GQ Sbjct: 507 TEHGAAKFTSAAILAAETRLVEAATTRTAFGATAARVGAVLDGFEARSGVRLDAGQHHMA 566 Query: 978 RMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM-RSA 1036 G AG GKTT RA AV + R++ L + A + R Sbjct: 567 TAFAVDDRLVVAGIGPAGSGKTTAMRAYAEAVA----ASGQRLIPLATSSAAADVLARDL 622 Query: 1037 GVDAQTLASFLHDTQLQQRSGET----------------PDFSNTLFLLDESSMVGNTDM 1080 G A+ L FLH+ +G + + L+DE+ M G ++ Sbjct: 623 GAKAENLHKFLHEYSDAPTAGASKALWNGTGIPAWARGFALRPGDVVLVDEAGMAGTFNL 682 Query: 1081 ARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAV 1140 R + A G GD QL A+ G RL ++ A + + R Sbjct: 683 DRLVQIAAHRGAVVRLLGDYRQLGAVESGGALRLIANQAGA--VELSTLHRFNNPREAEA 740 Query: 1141 YSLINRDVERALSGLESVKPSQVPRQEG----AWAPEHSVTEFSHSQEAKLAEAQQKAML 1196 + AL + +G A+A + A L Sbjct: 741 TLKVRVGDSSALDFYADAGRIRSGSAQGMIEAAYAGWKTDMLAGKKTIMAAATTADVTAL 800 Query: 1197 KGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGK 1256 +A D + A IVT N+ + ++ V+ Sbjct: 801 SAQARLDRIEAGHVEADGARLRDGNLAGRGDWIVTRDNDRKNKVSRGRDWVKNGDAWTVT 860 Query: 1257 EQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAG--ISKDDGLITLQDAEG 1314 ++ L NI RLS +L +R G + LIT + + Sbjct: 861 KRHRDGSLTVKNIEHQGTVRLSAEYVSAHVELLYATTTNRAQGSTVDTAHPLITAEMSRE 920 Query: 1315 NTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTL 1374 N +I R + + T + + DR+ K+D + + + G+ ++ Sbjct: 921 NLYVILSRAQERTSLYVETHELLPFDEDDRLDRVKNDPRQFAAREVLTAILNREGNEISA 980 Query: 1375 SD 1376 ++ Sbjct: 981 TE 982 Score = 68.0 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 37/151 (24%), Positives = 62/151 (41%), Gaps = 21/151 (13%) Query: 1342 GDRMRFTKSDRERGY-------VANSVWTVTAV-SGDSVTLSDGQQTREIRPGQEQAEQH 1393 GD + +DR+ WTVT S+T+ + + +R E H Sbjct: 830 GDWIVTRDNDRKNKVSRGRDWVKNGDAWTVTKRHRDGSLTVKNIEHQGTVRLSAEYVSAH 889 Query: 1394 IDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTD----- 1448 ++L YA T + AQG++ A L E +R E+ YV LSR ++ +Y + Sbjct: 890 VELLYATTTNRAQGSTVDTAHPLITAEMSR------ENLYVILSRAQERTSLYVETHELL 943 Query: 1449 --NRQGWTDAINNAVQKGTAHDVFEPKPDRE 1477 + D + N ++ A +V +RE Sbjct: 944 PFDEDDRLDRVKNDPRQFAAREVLTAILNRE 974 >UniRef50_C6RJX0 Putative MobA/MobL protein n=1 Tax=Acinetobacter radioresistens SK82 RepID=C6RJX0_ACIRA Length = 972 Score = 186 bits (472), Expect = 7e-45, Method: Composition-based stats. Identities = 100/539 (18%), Positives = 183/539 (33%), Gaps = 85/539 (15%) Query: 785 SATVFASVTQMAMDNATLNGLARS-GRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTR 843 S+ VF + +++ +N + G D R+ + A+ L + Sbjct: 164 SSKVFVADIRLSW-ANHVNDFCENLGLDARI---DHRSYKAQGLELSSQNFRADYVSNHK 219 Query: 844 AGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTE 903 I HQ + + AL S + F+ DL + F T E Sbjct: 220 YFINENIKNIRHQNGEIIIERPSEVIRAL---TSNQSVFTARDL----ERFVMAHTDSQE 272 Query: 904 LGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEA---VMPL--- 957 + A + + G + S+ E SI I E P Sbjct: 273 --QYLKAYEAVMTCPDMAMLFGKDKVVFSSKELVGIEDSITAFIYNANEQSRVQKPFNLT 330 Query: 958 ----MERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLP 1013 + V Q A L ++DR +++ G AG GK+ V+SAV+ Sbjct: 331 EKFTLNAVKIADKRTFNREQ-EAAYYTLTSTDRISLLNGSAGTGKSY----VLSAVSEAF 385 Query: 1014 ESERPRVVGLGPTHRAVGEMRS-AGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDES 1072 ++ +V G+ + + + T+ASFL + SG + T+ +LDE+ Sbjct: 386 KTSDYKVHGIALQAITARAISDDCNIPSSTIASFLARYE----SGNFEINNKTVLILDEA 441 Query: 1073 SMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTR-SAADVAIMKEIVR 1131 MVG+ DM + ++ + GD+ QL A++ G F Q ++A +++I R Sbjct: 442 GMVGSRDMQKLLMIVEKHDAQIKLVGDSYQLSAVSAGSAFAHIQDNLDKKNIASLEDIQR 501 Query: 1132 QT-----PELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAK 1186 Q ++ EA L +V++AL +++ Sbjct: 502 QKYAKESEKMIEASKLLSKHEVDKALDIYKTINAVNEYESHDL----------------- 544 Query: 1187 LAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHD 1246 A+ + + ++ + L++ H N D LN M + Sbjct: 545 ------------------------ALAKTIKSWSEDSSKNKLMLAHSNNDVNELNRMARN 580 Query: 1247 VREKAGELG-KEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDD 1304 V K G+L + I GE ++ + L + + ++ G KD+ Sbjct: 581 VLIKNGQLSATGNHVKTAFGDIEITVGEKI---VFKQNDSKLKVSNGETAKVIGFDKDN 636 Score = 102 bits (253), Expect = 2e-19, Method: Composition-based stats. Identities = 104/694 (14%), Positives = 230/694 (33%), Gaps = 105/694 (15%) Query: 309 ASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISRE 368 Q+G + + ++ I L+ + FT D+ + + E+ + ++ Sbjct: 230 RHQNGEIIIERPSEVIRALTSNQSVFTARDLERFVMAHTDSQ----EQYLKAYEAVMTCP 285 Query: 369 QLIPL-DREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAG--------- 418 + L ++K +F+S V E S+ A + +Q+RV + T Sbjct: 286 DMAMLFGKDKVVFSSKELVGIEDSITAFIYNANEQSRVQKPFNLTEKFTLNAVKIADKRT 345 Query: 419 ---YSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMN 475 +A +++++G G G+ ++ + + +V IA + Sbjct: 346 FNREQEAAYYTLTSTDRISLLNGSAG-TGKSYVLSAVSEAFKTSDYKVHGIALQAITARA 404 Query: 476 MKQDERLSGELITGRRQLLEG--MAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQV- 532 + D + I E + +I+D+ + ++ LL +H+ Q+ Sbjct: 405 ISDDCNIPSSTIASFLARYESGNFEINNKTVLILDEAGMVGSRDMQKLLMIVEKHDAQIK 464 Query: 533 LITDSGQRTG--TGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAAS 590 L+ DS Q + GSA ++D + + E ++ + ++L Sbjct: 465 LVGDSYQLSAVSAGSAFAHIQDNLDKKNIASLEDIQRQKYAKESEKMIEASKLLSKHEVD 524 Query: 591 VKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMY 650 E L A+ +K+ M A S ++ +R R+ Sbjct: 525 KALDIYKTINAVNEYESHDL--ALAKTIKSWSEDSSKNKLMLAHSNNDVNELNRMARN-- 580 Query: 651 RPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKM 710 V+ + + + + + +T+ GE V + + K+ Sbjct: 581 ----VLIKNGQLSATGNHVKTAFGDIE---ITV----GEKIVFKQND----------SKL 619 Query: 711 PVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKL 770 V++GE +V G ++ + V S + + V K Sbjct: 620 KVSNGETAKVIGFDKD-NLNNIKFMMVQSDKNNEIIKVDLN--------------EYNKF 664 Query: 771 ENGWVETPGHSVS---DSATVFASVTQMAMDNATLNGLARSGRDVRL------YSSLDET 821 + G+ T S D+A + AS A N T L R +V + +++ ++ Sbjct: 665 KYGYANTIHSSQGMTVDNAYIVASENMNA--NLTYVALTRHKYNVEINYSAMSFTTNEKE 722 Query: 822 RTAE---KLARHPSFTVVSEQIKT---------RAGETSLETAI------SHQKSALHTP 863 K++ ++ V +++ R+ + T A Sbjct: 723 FVKRPDGKISYDQNYNPVEKEVTPFENFKKVLGRSEKKEFSTDFTLVDKQEKLIKAYLQD 782 Query: 864 AQQ---------AIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQ-IK 913 + I+ + + S F+ +++TE ++ + + G I I Sbjct: 783 HRHHIEDKREIYGINSKIHALTSANRTFTKEEIVTEVRANLKSKSILGDEIGSIRGMKIA 842 Query: 914 RGDLLYVDVAKGYGTGLLVSRASYE--AEKSILR 945 +G+LL ++ TG + ++E E +L Sbjct: 843 KGELLKLEEGLQIKTGFF-KKETFEKGTELKVLD 875 Score = 84.5 bits (207), Expect = 3e-14, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 47/132 (35%), Gaps = 17/132 (12%) Query: 1336 TIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSV-----TLSDGQQTREIRPGQEQA 1390 I + G+++ F ++D + V D++ + + EI Sbjct: 601 DIEITVGEKIVFKQNDSKLKVSNGETAKVIGFDKDNLNNIKFMMVQSDKNNEIIKVDLNE 660 Query: 1391 EQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQV----- 1445 YA T H +QG + A + N L YVAL+R K +V++ Sbjct: 661 YNKFKYGYANTIHSSQGMTVDNAYIVASENMNANLT------YVALTRHKYNVEINYSAM 714 Query: 1446 -YTDNRQGWTDA 1456 +T N + + Sbjct: 715 SFTTNEKEFVKR 726 >UniRef50_Q131S0 MobA/MobL protein n=37 Tax=cellular organisms RepID=Q131S0_RHOPS Length = 1039 Score = 186 bits (471), Expect = 8e-45, Method: Composition-based stats. Identities = 99/465 (21%), Positives = 167/465 (35%), Gaps = 71/465 (15%) Query: 871 ALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGL 930 AL + ++ F+ D+ A + G + I A DL+ + G G Sbjct: 287 ALDAITHQQSTFTQRDMAKFAHRHS---DGIDQFNAVIGAMRSAPDLVEL-GQDGRGEDR 342 Query: 931 LVSRASYEAEKSIL----------RHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMI 980 +R EAE+ + RH + + L L+ L+ Q A + Sbjct: 343 FTTRDMIEAEQRLHHAAKLMAERERHEVNDADRQAALTRAEARGLV--LSGEQADALAHV 400 Query: 981 LETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRS-AGVD 1039 + D +V GYAG GK+ A E+ V G+ + A + S +G+ Sbjct: 401 TDGRD-LGIVVGYAGAGKSAMLGVAREA----WEAAGYEVRGVALSGIAAENLESGSGIA 455 Query: 1040 AQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGD 1099 ++T+AS H G + + ++DE+ MVG + R + A G + V GD Sbjct: 456 SRTIASLEHG----WGQGRDLLSARDVLVIDEAGMVGTRQLERVLSHAAEAGAKVVLVGD 511 Query: 1100 TDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPEL-REAVYSLINRDVERALSGLESV 1158 QLQAI G FR R + E+ RQ E R+A L A+ + Sbjct: 512 PQQLQAIEAGAAFRSIHERHGG--VAIGEVRRQREEWQRDATRDLATGKTGAAIHAYD-- 567 Query: 1159 KPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTG 1218 + + A + +GE L + RD Sbjct: 568 ------------------------ENGMVHAAASRERARGE--------LIDRWDRDRQA 595 Query: 1219 RTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLS 1278 +R +I+TH N++ R LN + AG+LG E V V V R Sbjct: 596 SPDRSR---IILTHTNDEVRALNEGARERMRAAGDLG-EDVHVTV--ERGARSFATGDRV 649 Query: 1279 TWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPRE 1323 + + +L + + I +S+ I+++ +G + ++ Sbjct: 650 MFLQNERSLGVKNGTLGAIEQVSQ--QSISVRIDDGRSVSFDLKD 692 Score = 114 bits (284), Expect = 4e-23, Method: Composition-based stats. Identities = 92/667 (13%), Positives = 211/667 (31%), Gaps = 89/667 (13%) Query: 237 RSQTIREAVGEDASLKSRDVAALD--TRKSKQHVDPEIKMAEWMQTLKETGFDIRAYR-- 292 R++ + A + ++ +A LD R + + + E + I + R Sbjct: 193 RTEIVERWRERWAEIANQRLAELDIDARIDHRSFEAQGIGLEPQSQIGAPAQRIESQRIE 252 Query: 293 ----DAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILP 348 +AA AD + A +G + + A+ ++ ++ FT D+ Sbjct: 253 GQGIEAAANVADRAEMHREIARGNGERIIADPSIALDAITHQQSTFTQRDMAKFAH---- 308 Query: 349 PENGVIERARAGIDEAISREQLIPLDREKG---LFTSGIHVLDELSVRALSR-------- 397 + I++ A I S L+ L ++ FT+ + E + ++ Sbjct: 309 RHSDGIDQFNAVIGAMRSAPDLVELGQDGRGEDRFTTRDMIEAEQRLHHAAKLMAERERH 368 Query: 398 ---DIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVM 454 D +Q +T + + + +DA++ + R +V G AG+ + Sbjct: 369 EVNDADRQAALTRAEARGLVLSGEQADALAHVTDGRDLGIVVGYAG--AGKSAMLGVARE 426 Query: 455 MAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQL--LEGMAFTPGSTVIVDQGEK 512 G EV+ +A + N++ ++ I + +++D+ Sbjct: 427 AWEAAGYEVRGVALSGIAAENLESGSGIASRTIASLEHGWGQGRDLLSARDVLVIDEAGM 486 Query: 513 LSLKETLTLLDGAARHNVQVLITDSGQR---TGTGSALMAMKDAGVNTYRWQGGEQRPAT 569 + ++ +L AA +V++ Q+ G+A ++ + + QR Sbjct: 487 VGTRQLERVLSHAAEAGAKVVLVGDPQQLQAIEAGAAFRSIHERHGGVAIGEVRRQREEW 546 Query: 570 IISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEV 629 R AA E + + RE+A Sbjct: 547 ----QRDATRDLATGKTGAAIHAYDENGMVHAAASRERAR-------------------- 582 Query: 630 TMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETR-SHDRYVIDRVTAQSHSLTLRDAQG 688 G ++++W+ + + S DR I +T + + + Sbjct: 583 -----------------------GELIDRWDRDRQASPDRSRI-ILTHTNDEVRALNEGA 618 Query: 689 ETQVVRISSLDSSWSLF-RPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTV 747 ++ L + A G+R+ L V G + VS+ +++V Sbjct: 619 RERMRAAGDLGEDVHVTVERGARSFATGDRVMFLQNERSLGVKNGTLGAIEQVSQQSISV 678 Query: 748 VVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSA-TVFASVTQMAMDNATLNGLA 806 + VS ++++G+ T + + T +++ L+ Sbjct: 679 RIDDGRS-----VSFDLKDYNRIDHGYAATIHKAQGMTVDRTHVLATPGMDAHSSYVALS 733 Query: 807 RSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQ 866 R + L+ D+ + ++L R S + L+ + + Sbjct: 734 RHRDGMDLHYGRDDFASQDRLVRTLSRDRAKDMASDYERADPLQGYAERRGITFRERVAE 793 Query: 867 AIHLALP 873 + +P Sbjct: 794 IVQKLVP 800 Score = 83.0 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 68/432 (15%), Positives = 125/432 (28%), Gaps = 75/432 (17%) Query: 1333 TPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQ 1392 TGDR+ F +++R G ++ + VS S+++ + Sbjct: 637 ERGARSFATGDRVMFLQNERSLGVKNGTLGAIEQVSQQSISVRIDDGRSV--SFDLKDYN 694 Query: 1393 HIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYT--DN- 1449 ID YA T H AQG + L + S+YVALSR + + ++ D+ Sbjct: 695 RIDHGYAATIHKAQGMTVDRTHVLATPGMDAH------SSYVALSRHRDGMDLHYGRDDF 748 Query: 1450 --RQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLA 1507 + ++ K A D P + + R V Sbjct: 749 ASQDRLVRTLSRDRAKDMASDYERADPLQGYAERRGITFRERVAEIVQ------------ 796 Query: 1508 GGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGEGRVKGSG 1567 + + + + P G +G D G + E R Sbjct: 797 ------KLVPEKLRGMFDGLRFP-----GDVSG-------HDGGRRPERETPERR----- 833 Query: 1568 DAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPGAITGGRVWGD 1627 A + + E +A + +R R A+ + Sbjct: 834 SAVAAVRRTTDTPERTVAADRDAALRQTRT-------------------KALIRHARAVN 874 Query: 1628 IPDNSVQPGAGNGEPVTAEVLAQRQAEEAIRRETERRADEIVRKMAENKPDLPDGKTEQA 1687 Q G E+ R+ EA+R A+ + E G +A Sbjct: 875 AIFEMQQQGGKASPEQVKELQEARKEFEAVRPYGSHDAEAAYKTNPELAEQAASGNPARA 934 Query: 1688 VREIAGQERDRAAITEREAALPEGVLREPQRVREAVRE-----IARENLLQERLQQMERD 1742 +R + + R R V R + + + + ++ + + + + Sbjct: 935 IRALQFETELRTDPARR---ADRFVERWHKLDQTSQHQYQAGDMSGYKSTRAAMGDLAKS 991 Query: 1743 MVRDLQKEKTLG 1754 + RD Q E L Sbjct: 992 LERDPQLESILA 1003 >UniRef50_B4V4K9 Putative uncharacterized protein n=1 Tax=Streptomyces sp. Mg1 RepID=B4V4K9_9ACTO Length = 1359 Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats. Identities = 153/804 (19%), Positives = 280/804 (34%), Gaps = 106/804 (13%) Query: 79 GYDLTFSAPKSVSMMAMLGGDK---RLIDAHNQAVDFAVRQVEALASTRV----MTDGQS 131 G D+T PKS+S L G + R+ + +V AVR +E A+ + Q+ Sbjct: 247 GVDITLDLPKSISAAYGLAGAELAGRIEEDWLASVSEAVRALEEWAAYGMAGHHGDGQQA 306 Query: 132 ETVLTGNLVMALFNHDTSRD-----QEPQLHTHAVVANVTQH-NGEWKTLSSDKVGKTGF 185 E V T L+ H ++R +P LH H +A++ + +G+W+T++ + Sbjct: 307 ERVATSGLIGWTTLHRSARPVDGSPGDPHLHVHVNIAHLAKCVDGKWRTIAGGGEDLHRY 366 Query: 186 IENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPV---EAFSGRSQTIR 242 + N+IA GRL +E G E G G WE+ GV EAFS R + + Sbjct: 367 AHLI--NEIAEGRL----RARLIEGYGARFERSGSTGAWELAGVDEGLREAFSRRHRQVI 420 Query: 243 EAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQT-LKETGFD------IRAYRDAA 295 + VGE A+ + + AA + ++K+ PE W E G + + A Sbjct: 421 DLVGEGATRERQKTAARRSAETKEDAGPEAPREAWRTRAAAELGGEGAVDAMVAAALPGP 480 Query: 296 DQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIE 355 D A + GP D+ + + A GL+ + ++T V+A V LP + Sbjct: 481 DGSAPPLSAGGGPRMPGPADIAERIWDAAHGLTASRKTVSHTHVMAAVVRTLPYLLSTRQ 540 Query: 356 RARAGIDEAISREQLIPLDR-------EKGLFTSGIHVLDELSVRALSRDIMKQNR---- 404 A + + L + +T V E +V + + ++ Sbjct: 541 LASLADEALAVGGHAVRLTDSNRGHHTHRQRYTHTTVVAAERTVIECATAGLGRHAARLT 600 Query: 405 -------------VTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAE 451 ++ +A V L + V G G AG+ + Sbjct: 601 VDAAEMTLASVEVANSTADRPFAFSAEQRAVVMRLLTAGHAADAVIGVAG-AGKTTLMQA 659 Query: 452 LVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITG-RRQLLEGMAFTPGSTVIVDQG 510 G V + + N+ + + + R++ G +++D+ Sbjct: 660 ARTGWEAAGLSVVGASTAAVAAANLAAEAGIESRTVAAWTREISGGRGLHGVGVLVIDEA 719 Query: 511 EKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMKDAGVNTYRWQGGEQRPATI 570 + + LL AA +V+ G L ++ G+ + + Sbjct: 720 AMVDDRALAALLRHAAGTGTKVV--------AVGDPL-QLRAVGIGGGFARVHQLVDGLT 770 Query: 571 ISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVT 630 ++E N R + A + R A T A+ + G + + Sbjct: 771 LTE---NRRQRDVVER------------AALQDWRTGAR-TGAL-AAFAAHGRVHADDTA 813 Query: 631 MTALSPVWLDSRSRYLRDMYRP-GMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGE 689 AL+ + R P G V + R D + + A + ++ + A GE Sbjct: 814 TEALTSMLAAWNQARGRWSGDPHGQVSQLLLLAIRRAD---VATLNAGARAVLV--ASGE 868 Query: 690 TQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLR-------VSGGDRLQVASVSE 742 ++++ ++ A G+ + + R V G R V +V Sbjct: 869 L------EEGRTYAVAGGGRLRFAAGDLVHIRRNDYRSRRDRYAVDVLNGFRGVVLAVDA 922 Query: 743 DAMTVVVPGRAEPATLPV------SDSPFTALKLENGWVETPGHSVSDSATVFASVTQMA 796 +V R PA V S +L + + T G + +A V + A Sbjct: 923 RQGVLVQWRRPRPAGGFVLREAWMSARDIAEGRLTHAYAMTIGSAQGLTAEVAIAYGLHA 982 Query: 797 MDNATLNGLARSGRDVRLYSSLDE 820 + + ++R+ ++ LY LDE Sbjct: 983 DSHTLYSAMSRARQESHLYLPLDE 1006 Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats. Identities = 95/603 (15%), Positives = 169/603 (28%), Gaps = 118/603 (19%) Query: 862 TPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRG----DL 917 + I A + + + S ++ +L + + G L Sbjct: 499 ADIAERIWDAAHGLTASRKTVSHTHVMAAVVRTLPYLLSTRQLASLADEALAVGGHAVRL 558 Query: 918 LYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGEL------------ 965 + AE++++ G + E+ Sbjct: 559 TDSNRGHHTHRQRYTHTTVVAAERTVIECATAGLGRHAARLTVDAAEMTLASVEVANSTA 618 Query: 966 --MEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGL 1023 ++ QRA +L V G AG GKTT +A + S Sbjct: 619 DRPFAFSAEQRAVVMRLLTAGHAADAVIGVAGAGKTTLMQAARTGWEAAGLSVVGASTAA 678 Query: 1024 GPTHRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARA 1083 A AG++++T+A++ ++ SG + ++DE++MV + +A Sbjct: 679 ---VAAANLAAEAGIESRTVAAW-----TREISGGRGLHGVGVLVIDEAAMVDDRALAAL 730 Query: 1084 YALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSL 1143 A G + VA GD QL+A+ G F D + E RQ + A Sbjct: 731 LRHAAGTGTKVVAVGDPLQLRAVGIGGGFARV--HQLVDGLTLTENRRQRDVVERAA--- 785 Query: 1144 INRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPD 1203 + + + A A + A Sbjct: 786 ---------------------------LQDWRTGARTGALAAFAAHGRVHADDTATEALT 818 Query: 1204 VPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPV 1263 + + ++G Q L++ D LN+ V +GEL + + Sbjct: 819 SMLAAWNQARGRWSGDPHGQVSQLLLLAIRRADVATLNAGARAVLVASGELEEGRTY--- 875 Query: 1264 LNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPRE 1323 A G LR + H + + L Sbjct: 876 ---AVAGGGRLRFAAGDLVHIRRNDYRSRRDRYAVDVLNGFRGVVLA------------- 919 Query: 1324 AVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREI 1383 + G +++ + G+V W Sbjct: 920 -------------VDARQGVLVQWRRPRPAGGFVLREAW--------------------- 945 Query: 1384 RPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHV 1443 ++ AE + AYA+T AQG + AIA L A + Y A+SR +Q Sbjct: 946 MSARDIAEGRLTHAYAMTIGSAQGLTAEVAIAY-------GLHADSHTLYSAMSRARQES 998 Query: 1444 QVY 1446 +Y Sbjct: 999 HLY 1001 >UniRef50_C4DCY8 TrwC relaxase n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DCY8_9ACTO Length = 1471 Score = 185 bits (468), Expect = 2e-44, Method: Composition-based stats. Identities = 88/511 (17%), Positives = 174/511 (34%), Gaps = 54/511 (10%) Query: 79 GYDLTFSAPKSVSMMAMLGGDK---RLIDAHNQAVDFAVRQVEALASTRV----MTDGQS 131 G+DLT PKS S++ L + +L +AV V +E + + ++ Sbjct: 185 GFDLTLDMPKSFSIVQALAPEPVATQLDAVFQEAVRETVAALETWTAYGLKGHHGDGKKA 244 Query: 132 ETVLTGNLVMALFNHDTSR-----DQEPQLHTHAVVANVTQH-NGEWKTLSSDKVGKTGF 185 V L+ + H T+R +P LH H + N+ + +W+T++S Sbjct: 245 RRVDADGLISWVATHRTARPVATAAPDPHLHAHVQILNMVHCSDDKWRTVASGG------ 298 Query: 186 IENVYANQIAFGRLYREKLKE-QVEALGYETEVVGKHGMWEMPGVPVEA---FSGRSQTI 241 +++ + A + +++ LG + WE+ G+ + FS R + Sbjct: 299 -RDIFRHAHAADAYIKARIRHYTSTQLGIQWHRDPVTRQWEITGITPDMRGVFSKRQHQV 357 Query: 242 REAVGE------DASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAA 295 AV A+ + A TR+ D + +W + TG D+ + Sbjct: 358 LAAVAANWVQEPHATPRQSKACAAATRQPAAPWDIAALLQDWHRQAALTGADVDQLLRSI 417 Query: 296 DQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIE 355 A + G + + G++ + T D+LA LP +E Sbjct: 418 TAEASPPSARQGLRPTIVEIADEVFHPDV-GVTSHRKSVTRADILAAVAEALPAGVDCLE 476 Query: 356 RARAGIDEAIS-REQLIPLDREKG-------LFTSGIHVLDELSVRALSRDIMKQNRVTV 407 R D+ ++ + L R+ G +T+ V E+++ + + V Sbjct: 477 RLEHLTDQVLAVDGYAVRLKRDAGATLSNAQRYTTADIVASEIAIFNAASKRLNGAYPRV 536 Query: 408 H------------PEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMM 455 + + LA + V G G +G+ + L Sbjct: 537 DASLVAEVVADFETSAGFHLSQQQRAVIDRLATSGHGVDAVIGVPG-SGKTTIMRVLAEA 595 Query: 456 AREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQ-LLEGMAFTPGSTVIVDQGEKLS 514 G +V + + + ++ + + + G ++VD+ Sbjct: 596 HARAGHQVWGASTAAVAALRLRHATAIPSRTVAYWLHRITSGPGLEGVDVLVVDEAGMAD 655 Query: 515 LKETLTLLDGAARHNVQVL-ITDSGQRTGTG 544 ++ TLL A R Q++ I D+ Q G Sbjct: 656 DRQKATLLSAAERSGTQIIGIGDTFQLRSPG 686 Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats. Identities = 102/662 (15%), Positives = 190/662 (28%), Gaps = 134/662 (20%) Query: 832 SFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEA 891 + V + +++ E S +A + + A + H + V +K + + D+L Sbjct: 406 TGADVDQLLRSITAEASPPSARQGLRPTIVEIADEVFHPDVGVTSHRK-SVTRADILAAV 464 Query: 892 KSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGT-----GLLVSRASYEAEKSILRH 946 G E + Q+ D V + + G + +E +I Sbjct: 465 AEALPAGVDCLERLEHLTDQVLAVDGYAVRLKRDAGATLSNAQRYTTADIVASEIAIFNA 524 Query: 947 ILEGKEAVMPLMER---------VPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVG 997 + P ++ L+ QRA + + V G G G Sbjct: 525 ASKRLNGAYPRVDASLVAEVVADFETSAGFHLSQQQRAVIDRLATSGHGVDAVIGVPGSG 584 Query: 998 KTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA-GVDAQTLASFLHDTQLQQRS 1056 KTT R + A +V G A +R A + ++T+A +LH Sbjct: 585 KTTIMRVLAEAHARA----GHQVWGASTAAVAALRLRHATAIPSRTVAYWLHRIT----- 635 Query: 1057 GETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQ 1116 + ++DE+ M + A + G + + GDT QL++ G F Sbjct: 636 SGPGLEGVDVLVVDEAGMADDRQKATLLSAAERSGTQIIGIGDTFQLRSPGVGSTFGDVH 695 Query: 1117 TRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSV 1176 T V + + RQ E +R A Sbjct: 696 TIVGGQV--LTDFRRQRYE--------THRHALSAWR----------------------- 722 Query: 1177 TEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVR--DYTGRTPEAREQTLIVTHLN 1234 F H +E A A+ + D + A + +A +Q +++ N Sbjct: 723 --FDHRRETLHMFADTGAIHATNSLDDTLAGMTAAWWARFQHITNPHDAIDQIMVLAGHN 780 Query: 1235 EDRRVLNSMIHDVREKAGELGKEQVMV-----PVLNTANIRDGELRRLSTWETHRDALVL 1289 D +LN+ R AG L D + R + + + Sbjct: 781 SDVTILNAAAQATRLAAGHLDAGTGFTYTTAPGQAMRLYAGDVVVTRANDYRPRGQGPDI 840 Query: 1290 VDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTK 1349 ++ + + I G + R+ + + Sbjct: 841 LNGIRAHVVTIDAATGQL------------------------------------RLEWRE 864 Query: 1350 SDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGAS 1409 + + + + +V+L YA+ H QG Sbjct: 865 TTPCGAILRQQTVSRDYIDAGNVSL----------------------GYAMVVHKDQGGQ 902 Query: 1410 ETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDV 1469 I ++AY ALSR +HV + + + + A + G A D Sbjct: 903 AEHVIVNLTGMS-------PDAAYAALSRHMEHVDAFL--AREVVEHADRATRLGAARDG 953 Query: 1470 FE 1471 + Sbjct: 954 QD 955 >UniRef50_D0LFJ6 TrwC relaxase n=1 Tax=Gordonia bronchialis DSM 43247 RepID=D0LFJ6_GORB4 Length = 2090 Score = 185 bits (468), Expect = 2e-44, Method: Composition-based stats. Identities = 142/956 (14%), Positives = 271/956 (28%), Gaps = 195/956 (20%) Query: 49 KDVFTRLLEGRLPDGADLSRMQDGSNRHR----PGYDLTFSAPKSVSMMAMLGG---DKR 101 ++ F D +LS R R GYD+TFS KSVS + + Sbjct: 191 REWFDADYHRPARDERELSGYIAQQTRQRQSAVAGYDMTFSPVKSVSTLWAIAPIDMAST 250 Query: 102 LIDAHNQAVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAV 161 + DAH AV A+ +E A + V T L+ A F H SR +P LHTH Sbjct: 251 IEDAHRAAVSDAIAFIEREACYSRLGTNGVAQVDTDGLIAAAFTHRDSRAGDPDLHTHVA 310 Query: 162 VANVTQHN-----GEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQV-EALGYET 215 ++N + W L +Y ++ +Y +L+ + ++LG Sbjct: 311 ISNKVRVRDAAGIARWMALDGRP---------LYKATVSASEVYNSRLELYLHQSLGVTF 361 Query: 216 EVV-----GKHGMWEMPGVP---VEAFSGRSQTIREAVGEDA---------------SLK 252 K + E+ G+P ++ +S R + I V E + + Sbjct: 362 SERAQPDLRKRAVREIDGIPTDLMQRWSSRREAIEARVAELSAQFHTDHGREPTTGEAFD 421 Query: 253 SRDVAALDTRKSK-QHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQ 311 A LDTR+ K + + W ++ + A R + P ++ Sbjct: 422 LAQQATLDTREKKHEPRSYAEQRRTWRAEAEQVLGGESGLKGVIADAAVGRPVRPHRGTE 481 Query: 312 DGPDV-QQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAI----- 365 D Q+ + I +S + ++ + A L + A I A+ Sbjct: 482 LDLDTCQEVASDIITVVSATRARWQRPHLRAEAERQLRDRDFAGLDDPATISAAVEQIVD 541 Query: 366 ----------------------------SREQLIPLDREKGLFTSGIHVLDELSVRALSR 397 + + + + L TS + E + A +R Sbjct: 542 TALSSSDSVRVAGDDLDGALNEPHVLRRANGESVFTRHDTDLHTSRTILAAEARIVAAAR 601 Query: 398 DIMKQN--------RVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERV 449 + + + G S V +A + +V G G+ + Sbjct: 602 RVDGRTIDGDAVSLALLEQAANGRELNDGQSAMVREMATSGRRVQLVLAPAG-TGKTTAL 660 Query: 450 AELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFT--------- 500 L + G +A + ++++ + + QL+ Sbjct: 661 RTLARAWNDSGGTTVGLAPTAAAAAVLREELDTTTDTAAKLVQLVATERLQALAATPRWR 720 Query: 501 ----------------------------------PGSTVIVDQGEKLSLKETLTLLDGAA 526 P + V+VD+ S + T++ Sbjct: 721 TATNPRLARQVRAARAELSRSRPPTIPDWFTAIGPNTLVVVDEAGLASTADLDTVIRFVC 780 Query: 527 RHNVQVLITDSGQRTGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGD 586 V + Q+ + SA ++D + G + ++ D A LA Sbjct: 781 ARGGSVRLVGDDQQLASISAGGVLRD-----IAHETGALTLSQVVRFSDPAEGAASLA-- 833 Query: 587 FAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYL 646 ++ G+ + G A V ++ Sbjct: 834 ----LRDGDPAAL----------------------GFYADAGRVHVAADTVAVEQAYTAW 867 Query: 647 RDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFR 706 G D ++ ++L + + + ++ Sbjct: 868 AHDRDTG------------RDTVMLAATRDTVNAL---NERARADRLAADPAAPHAAVQL 912 Query: 707 PEKMPVADGERLRVTGKIPGLRVS------GGDRLQVASVSEDA-MTVVVPGRAEPATLP 759 + + + G+ + LR+S GDR QV ++ D +T TLP Sbjct: 913 SDGLQASIGDLICTRSNRRDLRLSATDWVRNGDRWQVTALGADGALTAQHLDTGRLITLP 972 Query: 760 VSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLD 819 +D L ++ + L R +Y + Sbjct: 973 -ADYVADNTTLGYASTIHAAQGMTADTCHVVGSDALTRQL-LYVALTRGRHANHIYLATA 1030 Query: 820 ETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVV 875 ET H + T + T + + + T A++A A + Sbjct: 1031 ETD------PHNATTPKARHPNTGLETLAAILERDGAQQSATTAAREATDPATRLH 1080 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 74/423 (17%), Positives = 118/423 (27%), Gaps = 89/423 (21%) Query: 961 VPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRV 1020 +L GQ A R + + R +V AG GKTT R + A N Sbjct: 619 EQAANGRELNDGQSAMVREMATSGRRVQLVLAPAGTGKTTALRTLARAWN----DSGGTT 674 Query: 1021 VGLGPTHRAVGEMRSA-GVDAQTLASFLH----------DTQLQQRSGETPDFS------ 1063 VGL PT A +R T A + + R+ P + Sbjct: 675 VGLAPTAAAAAVLREELDTTTDTAAKLVQLVATERLQALAATPRWRTATNPRLARQVRAA 734 Query: 1064 ---------------------NTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQ 1102 NTL ++DE+ + D+ + A GG GD Q Sbjct: 735 RAELSRSRPPTIPDWFTAIGPNTLVVVDEAGLASTADLDTVIRFVCARGGSVRLVGDDQQ 794 Query: 1103 LQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQ 1162 L +I+ G R + A + ++VR + A + AL Sbjct: 795 LASISAGGVLRDIAHETGALT--LSQVVRFSDPAEGAASLALRDGDPAALGFY------- 845 Query: 1163 VPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPE 1222 + A Y A D + Sbjct: 846 ----------------------------ADAGRVHVAADTVAVEQAYTAWAHD-----RD 872 Query: 1223 AREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGEL---RRLST 1279 T+++ + LN R A + V + + G+L R Sbjct: 873 TGRDTVMLAATRDTVNALNERARADRLAA-DPAAPHAAVQLSDGLQASIGDLICTRSNRR 931 Query: 1280 WETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRV 1339 + + ++ + DG +T Q + + P + VA+ TL TI Sbjct: 932 DLRLSATDWVRNGDRWQVTALGA-DGALTAQHLDTGRLITLPADYVADNTTLGYASTIHA 990 Query: 1340 GTG 1342 G Sbjct: 991 AQG 993 Score = 59.9 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 63/329 (19%), Positives = 95/329 (28%), Gaps = 45/329 (13%) Query: 1333 TPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDS-VTLSDGQQTREIRPGQEQAE 1391 +R+ D +R W VTA+ D +T R I + Sbjct: 929 NRRDLRLSATDWVR-----------NGDRWQVTALGADGALTAQHLDTGRLITLPADYVA 977 Query: 1392 QHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQ 1451 + L YA T H AQG + + R+L+ YVAL+R + +Y Sbjct: 978 DNTTLGYASTIHAAQGMTADTCHVVGSDALTRQLL------YVALTRGRHANHIY----- 1026 Query: 1452 GWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLA-GGD 1510 T P E + A A++ AA A L Sbjct: 1027 --LATAETDPHNATTPKARHPNTGLETLAAILERDGAQQSATTAAREATDPATRLHLAAG 1084 Query: 1511 SPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGEGRVKGSGDAQ 1570 + A + + AL A +R+ + L + G + Sbjct: 1085 AYAHAVGAAAEDALGAEALQALERDADN-------LYSTRTGRPIGTLTDAPAWPVLRHH 1137 Query: 1571 FVALQ-GSRNGESLLADNMQDGVRIARDNPDSGVVVRIAGE--------GRPWNPGAITG 1621 LQ + LA + D+P + + RI PW P A TG Sbjct: 1138 LATLQLRGADPLHRLATAIDMRELDTADDPAAVLDWRIDDTQNHSAGTGPLPWLPQAPTG 1197 Query: 1622 GRVWGDIPDNSVQPGAGNGEPVTAEVLAQ 1650 D + A + EV AQ Sbjct: 1198 ---LDDTWRTYLTARADCTRDLATEVAAQ 1223 >UniRef50_B3CU55 Putative conjugative transfer protein TraA n=26 Tax=Orientia tsutsugamushi str. Ikeda RepID=B3CU55_ORITI Length = 934 Score = 184 bits (466), Expect = 3e-44, Method: Composition-based stats. Identities = 85/465 (18%), Positives = 165/465 (35%), Gaps = 68/465 (14%) Query: 879 KLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYE 938 K F+ D + +A + T +L ++ + +L + G + + Sbjct: 256 KSIFTKQD-VEKAVKDIPDPTAREQLVQQV---LSSNRILELYHDDGESSKYFTTIEVRN 311 Query: 939 AEKSILRHILEGKEAV---MPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAG 995 E I+R + + V + E + ++ Q+ A R IL ++ V++G AG Sbjct: 312 EETRIIRIANKINDQVYYNDIYNLKSDIEGLANVSEEQKQALRHILLSTSGVRVLRGRAG 371 Query: 996 VGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAG-VDAQTLASFLHDTQLQQ 1054 GK+ V+ + L + +V+GL PTH+AV E+RS G + T+ FL++ + Sbjct: 372 TGKSY----VLIKAHKLATNRGQKVIGLAPTHKAVSELRSKGYTEVYTVKGFLYNRKKNF 427 Query: 1055 RSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRL 1114 G L ++DE+ MVG A + ++ + + +GD QL +I G F + Sbjct: 428 MQGS-------LIVVDEAGMVGTKAYAELFRVVRNNNCQLILAGDEKQLASIERGGMFEM 480 Query: 1115 QQTRSAADVAIMKEIVRQTPEL-REAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPE 1173 + ++ I RQ+ REA ++ ++ L Sbjct: 481 LSNIFGS--HVLVNIRRQSKNWSREAATKFAESNILSCITLLR----------------- 521 Query: 1174 HSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHL 1233 Q K + D L + + L++T Sbjct: 522 -----------------QNKCVKFDNTLQDSMSKLIYNW-----SLSKFKLHEKLVITVR 559 Query: 1234 NEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNV 1293 N+D +LNS I + + G L ++ + R + ++ L + ++ Sbjct: 560 NKDVDILNSSIRSLLKANGTLQGKEYRRSIAERKESYMAGDRIV--FQKSYKDLQIQNSE 617 Query: 1294 YHRIAGISKDDGLITLQDAEGNTRLISPREAVAEG---VTLYTPD 1335 + + +SK + P E + T+Y Sbjct: 618 FATLTSVSK--NKFIAKTDTRKEVSFDPSEIQFKHGYASTVYKAQ 660 Score = 106 bits (265), Expect = 7e-21, Method: Composition-based stats. Identities = 53/372 (14%), Positives = 116/372 (31%), Gaps = 44/372 (11%) Query: 317 QQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDRE 376 +T +I K FT DV I P+ E+ + + +L D E Sbjct: 245 ADVITDSITH---YKSIFTKQDVEKAVKDI--PDPTAREQLVQQVLSSNRILELYHDDGE 299 Query: 377 KGLFTSGIHVLDELSVRALSRDIMKQN-------RVTVHPEKSVPRTAGYSDAVSVLAQD 429 + + I V +E + + + + E + A+ + Sbjct: 300 SSKYFTTIEVRNEETRIIRIANKINDQVYYNDIYNLKSDIEGLANVSEEQKQALRHILLS 359 Query: 430 RPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITG 489 + ++ G+ G G+ + + +A +G++V +A ++ ++ + G Sbjct: 360 TSGVRVLRGRAG-TGKSYVLIKAHKLATNRGQKVIGLAPTHKAVSELRSKGYTEVYTVKG 418 Query: 490 RRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGT---GSA 546 F GS ++VD+ + K L +N Q+++ ++ + G Sbjct: 419 FL-YNRKKNFMQGSLIVVDEAGMVGTKAYAELFRVVRNNNCQLILAGDEKQLASIERGGM 477 Query: 547 LMAMK----DAGVNTYRWQGGEQRPATIISEPDRN---------------------VRYA 581 + + R Q + N + Sbjct: 478 FEMLSNIFGSHVLVNIRRQSKNWSREAATKFAESNILSCITLLRQNKCVKFDNTLQDSMS 537 Query: 582 RLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPE--VTMTALSPVWL 639 +L +++ S E + ++ IL +IRS LK G L E ++ ++ Sbjct: 538 KLIYNWSLSKFKLHEKLVITVRNKDVDILNSSIRSLLKANGTLQGKEYRRSIAERKESYM 597 Query: 640 DSRSRYLRDMYR 651 + Y+ Sbjct: 598 AGDRIVFQKSYK 609 Score = 87.6 bits (215), Expect = 4e-15, Method: Composition-based stats. Identities = 50/222 (22%), Positives = 87/222 (39%), Gaps = 33/222 (14%) Query: 1276 RLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPD 1335 LS ++ H ++ V N I S L A G + R ++AE Y Sbjct: 544 SLSKFKLHEKLVITVRNKDVDILNSSIRS----LLKANGTLQGKEYRRSIAERKESYM-- 597 Query: 1336 TIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDS-VTLSDGQQTREIRPGQEQAEQHI 1394 GDR+ F KS ++ + T+T+VS + + +D ++ P + Q Sbjct: 598 -----AGDRIVFQKSYKDLQIQNSEFATLTSVSKNKFIAKTDTRKEVSFDPSEIQ----F 648 Query: 1395 DLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVY-----TDN 1449 YA T + AQGAS L S+YVA++R +++Q+Y T + Sbjct: 649 KHGYASTVYKAQGASIKDVYVLHNGIS------NISSSYVAMTRHIENLQLYCNKEATGS 702 Query: 1450 RQGWTDAINNAVQK------GTAHDVFEPKPDREVMNAERLF 1485 + ++ +K TAHD+ + + V + + Sbjct: 703 INSLINQLSRPNEKSASITLKTAHDLEKERTKTTVFSKIENW 744 >UniRef50_UPI0001AEF487 conjugal transfer relaxase TraA n=1 Tax=Acinetobacter baumannii AB900 RepID=UPI0001AEF487 Length = 958 Score = 183 bits (465), Expect = 5e-44, Method: Composition-based stats. Identities = 102/517 (19%), Positives = 176/517 (34%), Gaps = 96/517 (18%) Query: 832 SFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEA 891 S + IK + GET +E L V+ + + F+M +L Sbjct: 221 SINENIKNIKRQNGETIIEKPSE----------------VLKVLTATQSVFTMRELDRFL 264 Query: 892 KSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGK 951 + + + A+ + V G + +L S E+SI I Sbjct: 265 VNHTDGEEQY------LKAREAVLMCPEMAVLYGKDSVVLSSNELVGIEESISTLIYNAN 318 Query: 952 EAVM-----------PLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTT 1000 + PL V Q A L ++DR +++ G AG GK+ Sbjct: 319 QDSRIQKPRTLIDKLPL-NAVRVAEKRTFNPEQEKAF-YTLTSTDRISLLNGSAGTGKSY 376 Query: 1001 QFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM-RSAGVDAQTLASFLHDTQLQQRSGET 1059 V+SAV+ + +V G+ + + + T+ASFL + SG Sbjct: 377 ----VLSAVSEAYKDSDYQVYGIALQAITAKAIASDCDIPSSTIASFLARYE----SGNL 428 Query: 1060 PDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTR- 1118 T+ +LDE+ MVG+ DM + + + GD+ QL A+ G F Q Sbjct: 429 EINDKTVLILDEAGMVGSRDMQKLLMITEQHNAQLKLVGDSYQLNAVMAGSAFNHIQKNL 488 Query: 1119 SAADVAIMKEIVRQ-TPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVT 1177 ++A ++ I RQ T E+R+A L +V++AL +++ + Sbjct: 489 DHKNIATLENIQRQKTTEMRKASEYLSKHEVDKALDIYQALGKVKACESHEV-------- 540 Query: 1178 EFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDR 1237 A+ + + + E LI+ H N D Sbjct: 541 ---------------------------------ALAKTIHSWSLDHSESKLILAHSNRDV 567 Query: 1238 RVLNSMIHDVREKAGELGKEQVMVPVLNTA-NIRDGELRRLSTWETHRDALVLVDNVYHR 1296 LN M + K G+L E V ++ G+ ++ + AL + + R Sbjct: 568 DELNRMARSILIKQGKLPAESQKVNTYKGEIDLATGDKI---VFKQNNHALNISNGETAR 624 Query: 1297 IAGISKD-----DGLITLQDAEGNTRLISPREAVAEG 1328 I G ++ GL+ D G + I Sbjct: 625 IIGFERNAQQQIKGLMVESDRGGQIKKIDLDSYQHFK 661 Score = 85.7 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 87/691 (12%), Positives = 203/691 (29%), Gaps = 134/691 (19%) Query: 310 SQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGI-------- 361 Q+G + + ++ + L+ + FT ++ V E ++ A + Sbjct: 231 RQNGETIIEKPSEVLKVLTATQSVFTMRELDRFLVNHTDGEEQYLKAREAVLMCPEMAVL 290 Query: 362 ----DEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTA 417 +S +L+ ++ ++ I+ ++ S R ++ + + Sbjct: 291 YGKDSVVLSSNELVGIEES---ISTLIYNANQDSRIQKPRTLIDKLPLNAVRVAEKRTFN 347 Query: 418 GYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMK 477 + +++++G G G+ ++ + ++ +V IA + + Sbjct: 348 PEQEKAFYTLTSTDRISLLNGSAG-TGKSYVLSAVSEAYKDSDYQVYGIALQAITAKAIA 406 Query: 478 QDERLSGELITGRRQLLEGMAFTPG--STVIVDQGEKLSLKETLTLLDGAARHNVQVLIT 535 D + I E + +I+D+ + ++ LL +HN Q+ + Sbjct: 407 SDCDIPSSTIASFLARYESGNLEINDKTVLILDEAGMVGSRDMQKLLMITEQHNAQLKLV 466 Query: 536 DSGQRTG---TGSALMAMKD-------AGVNTYRWQGGEQRPATIISEPDRNVRYA---- 581 + GSA ++ A + + Q + V A Sbjct: 467 GDSYQLNAVMAGSAFNHIQKNLDHKNIATLENIQRQKTTEMRKASEYLSKHEVDKALDIY 526 Query: 582 --------------RLAGDFAA-SVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGL 626 LA + S+ E + R+ L + RS L QG L Sbjct: 527 QALGKVKACESHEVALAKTIHSWSLDHSESKLILAHSNRDVDELNRMARSILIKQGKL-- 584 Query: 627 PEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDA 686 + Y Sbjct: 585 --------------PAESQKVNTY------------------------------------ 594 Query: 687 QGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMT 746 +GE + +++ D + +++GE R+ G + + Sbjct: 595 KGE---IDLATGDKIVFKQNNHALNISNGETARIIGFERNAQQQIK-----------GLM 640 Query: 747 VVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVS---DSATVFASVTQMAMDNATLN 803 V + + + + ++G+ T S ++A + AS A N T Sbjct: 641 VESDRGGQIKKIDLD----SYQHFKHGYANTIHSSQGMTVENAYILASENMNA--NLTYV 694 Query: 804 GLARSGRDVRLYSSLDETRTAEKL-------ARHPSFTVVSEQIKTRAGETSLETAISHQ 856 L R +V L S EK+ + +K G T ++ S Sbjct: 695 ALTRHKGNVELNYSATRFNQEEKIWVRKPDGQYQEKELSAFDNLKRTLGRTEVKNF-STD 753 Query: 857 KSALHTPAQQAIHLALPV---VESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIK 913 S + + + + K+ +++ +L A + + EL E+ ++ Sbjct: 754 YSVVQAKDELIKNYLQEHRHSISEKREIYNLNSMLK-AMTMPDQHFSKQELIEEVRNSLR 812 Query: 914 RGDLLYVDVAKGYGTGLLVSRASYEAEKSIL 944 +L ++ K G + + ++ ++ Sbjct: 813 SKAILGDEIVKFNGQMNIAKGEQLQLDQELI 843 Score = 81.1 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 28/128 (21%), Positives = 52/128 (40%), Gaps = 12/128 (9%) Query: 1323 EAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVT-----LSDG 1377 A ++ V Y + I + TGD++ F +++ + ++ + + Sbjct: 585 PAESQKVNTYKGE-IDLATGDKIVFKQNNHALNISNGETARIIGFERNAQQQIKGLMVES 643 Query: 1378 QQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALS 1437 + +I+ + QH YA T H +QG + A L N L YVAL+ Sbjct: 644 DRGGQIKKIDLDSYQHFKHGYANTIHSSQGMTVENAYILASENMNANLT------YVALT 697 Query: 1438 RMKQHVQV 1445 R K +V++ Sbjct: 698 RHKGNVEL 705 >UniRef50_Q0QW05 Putative uncharacterized protein n=1 Tax=Neisseria lactamica RepID=Q0QW05_NEILA Length = 831 Score = 182 bits (462), Expect = 9e-44, Method: Composition-based stats. Identities = 129/728 (17%), Positives = 252/728 (34%), Gaps = 150/728 (20%) Query: 34 AGRGAEQL-----GL---------QGSVDKDVFTRLLEG----RLPDGADLSRMQDGSNR 75 G GAE+L GL Q + D+++F LL+G P+ ++ ++G+ Sbjct: 36 FGNGAEELFRQYGGLEKHGNLKFGQNAKDRNLFHALLKGEVPIFDPETKEIIGFKEGAKN 95 Query: 76 HRPG-YDLTFSAPKSVSMMAMLGGD------------KRLIDAHNQAVDFAVRQVEALAS 122 + G YD TFSAPKSVS++ L + + L A +A D V ++ Sbjct: 96 RKTGAYDFTFSAPKSVSLLYALAEERSESDQAARKLSRALKTAFKEANDIVVAHMQEKVL 155 Query: 123 TRVMTDGQSETVLTGNLVMALFNHDTSRDQ-----EPQLHTHAVVANVTQH--NGEWKTL 175 DG+++ V ++A F HD +R +P LH H V N + + + Sbjct: 156 MNNFVDGKNQKVFNNQAIIAQFLHDDARRNKDGFVDPSLHCHNVFFNEVIAGYDENGQAI 215 Query: 176 SSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVG-KHGM-WEM------- 226 K+ + + + A+G+ +R LK++++ LG E K+G +E+ Sbjct: 216 -----FKSIDNLALISMRNAYGQFFRNILKQKIKDLGIEIVETEIKNGTSFEIVLTDNEV 270 Query: 227 -PGVPVEAFSGRSQTIREAVGE---------DASLKSRDVAALDTRKSKQHVDP------ 270 ++ FS R + I + + + RD ++ K P Sbjct: 271 EQREILDFFSSRKKEIDAEFKKQKKNPENKNKSEAQLRDEINQRIKRPKSDKYPRADWLK 330 Query: 271 -----------EIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQA 319 I ++ + ET F A + + + + Q A Sbjct: 331 ALSNRFEARFGNIDFEKFAEQPHETTFSRMAKEAKSFFKNFFSSSKEKETEEIKLKQQAA 390 Query: 320 VTQAIAGLSE------RKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPL 373 + L E R+ L V + N ++ A ID+ + + + Sbjct: 391 LKNMKLRLFEILENQSRQSSLVQKGDLLTAVLMDGDLNFDLDEAEKYIDDFLKENCQV-V 449 Query: 374 DREKGLFTSGIHVLDELSVR---------ALSRDIMKQNRVTVHPEKSVPR--TAGYSDA 422 + K ++ S I + +EL ++ + ++ + +H EK + + Sbjct: 450 GKTKEVYVSNIVIAEELEIQEKIEKLKNEQIKSSLLGADENIMHIEKIRNSGCSLEQLNL 509 Query: 423 VSVLAQDRPSLAIVSGQGGAAGQRE---RVAELVMMAREQGR----------------EV 463 + ++ + + +A V G G G+ V + + E+ R + Sbjct: 510 IDLIVRGKSKIACVQGDAG-TGKSYAASLVKTVSEIYAERRRATNAAIASVKDSVPELNL 568 Query: 464 QIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPG---STVIVDQGEKLSLKETLT 520 +A ++ +++ + + I E + VI+D+ +S + Sbjct: 569 MGMAFMGKTAKDLEDGTGIKSQTIAKFLLNWEKNGKEVNNDFNLVIIDEASMISAADARR 628 Query: 521 LLDGAA--RHNVQVLITDSGQRTGT--GSALMAMKDAGVNT-----YRWQGGEQRPATII 571 L + + + + D Q + G+ M+ AGV T R Q + + Sbjct: 629 LFEYIDLCPNTRCIFMGDVNQFSSVGRGTIFDQMQKAGVETTKLGNIRRQKTRESKVVVQ 688 Query: 572 SEPDRNVR---------------------YARLAGDFAASVKAGEESVAQVSGVREQAIL 610 + +++ D+ KAGEE +A + L Sbjct: 689 RFKKGQINKMFDFAERRKIFEEVPNIDNLISKMVQDYTDKFKAGEEVIALSGTNAVRNEL 748 Query: 611 TQAIRSEL 618 + IR EL Sbjct: 749 NRRIRDEL 756 Score = 140 bits (352), Expect = 5e-31, Method: Composition-based stats. Identities = 79/468 (16%), Positives = 148/468 (31%), Gaps = 79/468 (16%) Query: 815 YSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQ----QAIHL 870 + ++D + AE+ + E S ++ L A + Sbjct: 340 FGNIDFEKFAEQPHETTFSRMAKEAKSFFKNFFSSSKEKETEEIKLKQQAALKNMKLRLF 399 Query: 871 ALPVVESKKLAFSMV-DLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTG 929 + +S++ + DLLT E I+ +K + G Sbjct: 400 EILENQSRQSSLVQKGDLLTAVLMDGDLNFDLDEAEKYIDDFLKENCQVV-----GKTKE 454 Query: 930 LLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKL--------TSGQRAATRMIL 981 + VS E I I + K + E + + + Q +I+ Sbjct: 455 VYVSNIVIAEELEIQEKIEKLKNEQIKSSLLGADENIMHIEKIRNSGCSLEQLNLIDLIV 514 Query: 982 ETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESER---------------PRVVGLGPT 1026 + VQG AG GK+ V + + E R ++G+ Sbjct: 515 RGKSKIACVQGDAGTGKSYAASLVKTVSEIYAERRRATNAAIASVKDSVPELNLMGMAFM 574 Query: 1027 HRAVGEMRS-AGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYA 1085 + ++ G+ +QT+A FL + +++G+ + L ++DE+SM+ D R + Sbjct: 575 GKTAKDLEDGTGIKSQTIAKFLLNW---EKNGKEVNNDFNLVIIDEASMISAADARRLFE 631 Query: 1086 LIA-AGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTP-ELREAVYSL 1143 I R + GD +Q ++ G F Q ++ + + I RQ E + V Sbjct: 632 YIDLCPNTRCIFMGDVNQFSSVGRGTIF-DQMQKAGVETTKLGNIRRQKTRESKVVVQRF 690 Query: 1144 INRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPD 1203 + + E K + Sbjct: 691 KKGQINKMFDFAERRKIFEEVPNID----------------------------------- 715 Query: 1204 VPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKA 1251 L +V+DYT + +A E+ + ++ N R LN I D K Sbjct: 716 ---NLISKMVQDYTDK-FKAGEEVIALSGTNAVRNELNRRIRDELFKD 759 >UniRef50_C5SL18 Ti-type conjugative transfer relaxase TraA n=2 Tax=Proteobacteria RepID=C5SL18_9CAUL Length = 1074 Score = 182 bits (461), Expect = 1e-43, Method: Composition-based stats. Identities = 118/667 (17%), Positives = 219/667 (32%), Gaps = 104/667 (15%) Query: 804 GLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTP 863 LA +G DVR+ + R E + V + Q+ R E + Sbjct: 192 ALALAGHDVRIDHRSHQERGLE-IEPTQHVGVHATQMDRRGQSVERERLAEEARVRNADL 250 Query: 864 AQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVA 923 +Q + L ++ +K F D+ + E E + +L+ + A Sbjct: 251 IRQNPNQVLTLITGEKSVFDRTDIARTLHRYINEDAS--EYQSLFTTVMASDELVRL--A 306 Query: 924 KGYGTGLLVSRASYEAEKSILRHILEGKEAVM---------------------------- 955 G +R E E H+ + Sbjct: 307 VGPDGTRYSTRELVEVETRTASHVEAMAQRSDHTVADRYIERAIARQDEAIRRSVSSSLP 366 Query: 956 ---PLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNML 1012 ER ++ Q+ A R I + VV G+AG GK+T ++SA Sbjct: 367 EDVSAAERERSLKDVGMSDEQKDAVRHI-TGDAQIAVVVGFAGAGKST----LLSAAKEA 421 Query: 1013 PESERPRVVGLGPTHRAVGEMRS-AGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDE 1071 E++ V G +AVG + AG++ +TLAS+ + + G + + ++DE Sbjct: 422 WEAQGYTVHGAALAGKAVGGLEESAGIEGRTLASW----DTRWKMGTSELGPGDVLVIDE 477 Query: 1072 SSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVR 1131 + M+G+ M R + G + V GD +QLQAI G PFR R A +++I R Sbjct: 478 AGMIGSRQMDRFVSEAERTGAKLVLVGDHEQLQAIGAGAPFRAIAERVG--HASVEDIRR 535 Query: 1132 QTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQ 1191 Q + + + + A + Sbjct: 536 QRSDWQRDASKAFA---------------------------------TQRTAQGLAAYIE 562 Query: 1192 QKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKA 1251 + + L V+D R +R + H D R LN+ I + + Sbjct: 563 HGHVHLKADQSEATTALVRDYVKDVEARPDGSRAA---MAHRRVDVRELNNGIREELKAR 619 Query: 1252 GELGKEQVMVPVLN-TANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQ 1310 G L E V + N +G+ + + + + + + GI + ++ Sbjct: 620 GHLKGEDVPFNTDDGQRNFTEGDRL---VFLQNDREMGVKNGTLGTVEGIENNKLIV--- 673 Query: 1311 DAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGD 1370 +G+ + + + TI G + DR ++++ Sbjct: 674 RPDGSQTDVQINASEYKAFDHGYATTIHKTQGATV-----DRAYVLASDTMDR----HMT 724 Query: 1371 SVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFE 1430 V+++ + + GQ+Q + H DL T ++ S+ + + G R Sbjct: 725 YVSMTRHRDDATLYAGQDQFDGHRDL----TRSLSRSGSKETVLDYVDSSGRRHDTGQPV 780 Query: 1431 SAYVALS 1437 + VA + Sbjct: 781 ISTVATT 787 Score = 98.8 bits (244), Expect = 2e-18, Method: Composition-based stats. Identities = 86/447 (19%), Positives = 151/447 (33%), Gaps = 78/447 (17%) Query: 1336 TIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLS-DGQQTREIRPGQEQAEQHI 1394 GDR+ F ++DRE G ++ TV + + + + DG QT E + Sbjct: 635 QRNFTEGDRLVFLQNDREMGVKNGTLGTVEGIENNKLIVRPDGSQTDVQINASE--YKAF 692 Query: 1395 DLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYT-----DN 1449 D YA T H QGA+ A L +R + YV+++R + +Y D Sbjct: 693 DHGYATTIHKTQGATVDRAYVLASDTMDRHMT------YVSMTRHRDDATLYAGQDQFDG 746 Query: 1450 RQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGG 1509 + T +++ + K T D + R T + + A ++ G+ Sbjct: 747 HRDLTRSLSRSGSKETVLDYVDSSGRRH--------DTGQPVISTVATTGFAQRRGMNSD 798 Query: 1510 DSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGEGRVKGSGDA 1569 I P R+ P A D + + + R + A Sbjct: 799 -----IIYPARQGAAPESVPEAVDGS-------------------QSEVRQERDRSVDAA 834 Query: 1570 QFVALQGSR-NGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPGAITGGRVWGDI 1628 ++ G L ++ + I + V R R + G + Sbjct: 835 SAAQIKRDMFAGLKLPVTDINKDIGIDSERIPHKV-WRTQKPERD-----LPFGGSRSPL 888 Query: 1629 PDNSVQPGAGNGEPVTAE------VLAQRQAEEAIRRETERRADEIVRKMAENKPDLPDG 1682 + + G+ T E + Q+QA E+ MA P Sbjct: 889 EKAADRYARAYGDIQTMEKKGLPVLEGQKQALRHAEEALEKAQPGAASVMASGLEHAPGM 948 Query: 1683 KTEQAVREIAGQERDRAAI----TEREAALPEGV------------LREPQRVREAVREI 1726 + +A++E+ G+ R +A I ER+A V + R+R Sbjct: 949 R--RAIKELTGEARTQALIKGLSQERQALADPAVRADRMVGRWKTLTEQHDRLRGWQHAD 1006 Query: 1727 ARENLLQERLQQMERDMVRDLQKEKTL 1753 AR + L++R+Q+ R++ RD E L Sbjct: 1007 AR-HALEQRMQETAREIARDPLMESHL 1032 Score = 94.9 bits (234), Expect = 3e-17, Method: Composition-based stats. Identities = 124/830 (14%), Positives = 243/830 (29%), Gaps = 114/830 (13%) Query: 233 AFSGRSQTIREAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYR 292 + R+ G D + R + ++P + + G + R Sbjct: 184 EWEERTNQALALAGHDVRIDHRSHQ-----ERGLEIEPTQHVGVHATQMDRRGQSVERER 238 Query: 293 DAADQRADLRTLTPGPASQ------------DGPDVQQAVTQAIAG-LSERKVQFT---- 335 A + R L +Q D D+ + + + I SE + FT Sbjct: 239 LAEEARVRNADLIRQNPNQVLTLITGEKSVFDRTDIARTLHRYINEDASEYQSLFTTVMA 298 Query: 336 YTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDRE---KGLFTSGIHVLDELSV 392 +++ VG E A E + I DE Sbjct: 299 SDELVRLAVGPDGTRYSTRELVEVETRTASHVEAMAQRSDHTVADRYIERAIARQDEAIR 358 Query: 393 RALSRDIMKQNRV--TVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVA 450 R++S + + K V + DAV + D +A+V G G AG+ ++ Sbjct: 359 RSVSSSLPEDVSAAERERSLKDVGMSDEQKDAVRHITGDA-QIAVVVGFAG-AGKSTLLS 416 Query: 451 ELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITG--RRQLLEGMAFTPGSTVIVD 508 QG V A ++ +++ + G + R + PG +++D Sbjct: 417 AAKEAWEAQGYTVHGAALAGKAVGGLEESAGIEGRTLASWDTRWKMGTSELGPGDVLVID 476 Query: 509 QGEKLSLKETLTLLDGAARHNVQVLITDSG---QRTGTGSALMAMKD----AGVNTYRWQ 561 + + ++ + A R ++++ Q G G+ A+ + A V R Q Sbjct: 477 EAGMIGSRQMDRFVSEAERTGAKLVLVGDHEQLQAIGAGAPFRAIAERVGHASVEDIRRQ 536 Query: 562 GGEQRPAT---------------------IISEPDRNVRYARLAGDFAASVKAGEESVAQ 600 + + + + D++ L D+ V+A + Sbjct: 537 RSDWQRDASKAFATQRTAQGLAAYIEHGHVHLKADQSEATTALVRDYVKDVEARPDGSRA 596 Query: 601 VSGVR--EQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQ 658 R + L IR ELK +G L +V + G + Sbjct: 597 AMAHRRVDVRELNNGIREELKARGHLKGEDVPFNTDDGQ----------RNFTEGDRLVF 646 Query: 659 -WNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWS----LFRPEKMPVA 713 N + V ++ + G V+I++ + K A Sbjct: 647 LQNDREMGVKNGTLGTVEGIENNKLIVRPDGSQTDVQINASEYKAFDHGYATTIHKTQGA 706 Query: 714 DGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLE-N 772 +R V R + + +DA + + + K Sbjct: 707 TVDRAYVLASDTMDR--HMTYVSMTRHRDDATLYAGQDQFDGHRDLTRSLSRSGSKETVL 764 Query: 773 GWVETPGHSVSDSATVFASV------TQMAMDNATLNGLARSGRDVRLYSSLDETRTAEK 826 +V++ G V ++V + M++ + + + ++D +++ + Sbjct: 765 DYVDSSGRRHDTGQPVISTVATTGFAQRRGMNSDIIYPARQGAAPESVPEAVDGSQSEVR 824 Query: 827 LARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALP-VVESKKLAF--S 883 R S S R L+ ++ + +++ H + L F S Sbjct: 825 QERDRSVDAASAAQIKRDMFAGLKLPVTDINKDIGIDSERIPHKVWRTQKPERDLPFGGS 884 Query: 884 MVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSI 943 L A +A G+I K+G E +K Sbjct: 885 RSPLEKAADRYARA-------YGDIQTMEKKG------------------LPVLEGQKQA 919 Query: 944 LRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGY 993 LRH E E P V +E G R A + + + +++G Sbjct: 920 LRHAEEALEKAQPGAASVMASGLEH-APGMRRAIKELTGEARTQALIKGL 968 >UniRef50_Q310C7 ATP-dependent DNA helicase, RecD/TraA family n=4 Tax=Deltaproteobacteria RepID=Q310C7_DESDG Length = 698 Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats. Identities = 116/806 (14%), Positives = 233/806 (28%), Gaps = 169/806 (20%) Query: 651 RPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKM 710 +P +++ W + ++ +D + D +G + + + Sbjct: 7 QPVVLLGSWATHPKYGRQFKVDGMEHDLE----LDPEGLIHYLANHPEIKGIGPAKARLI 62 Query: 711 PVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKL 770 + G+ T R++ RL + DA + + ++ + +A L Sbjct: 63 VESFGDAFEETLLNDPERIALKARLPL-----DAARRLRDEWLKNRSVNAVMAWLSAFGL 117 Query: 771 ENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARH 830 + V T + + + R++R + + A KL Sbjct: 118 THHQVTTLVERLGGNCLDILKEDPYIL-----------IREIRGFGFKKVDKIARKLG-- 164 Query: 831 PSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTE 890 + + +I+ + A+ + + A + L+ + Sbjct: 165 -TPKDHTPRIRAGLNFC-VREALD--NGHCWIEYEDLVDQA------------NLLLVMD 208 Query: 891 AKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEG 950 A + ++A I+ L G ++ E+ L + Sbjct: 209 ALDSRVR------IESALDALIEEQALA---CDSHGGRFVVALPEIVRMERE-LALLFGQ 258 Query: 951 KEAVMPLMERVPG------ELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRA 1004 E P + V L Q A R L+ S +++ G AG GK+ Sbjct: 259 AETPNPHFQSVKKLDALIRRCASTLNEKQLDAVRSALQHS--ISLISGGAGSGKSYT--- 313 Query: 1005 VMSAVNMLPESERPRVVGLGPTHRAVGEMRS-AGVDAQTLASFL-HDTQLQQRSGETPDF 1062 +S +N + E VV PT +A + +G T+ L +D + RS E P Sbjct: 314 -ISVINTICEESDLEVVLAAPTGKAAKRLEEVSGRSGTTIHRLLGYDGKGFSRSKENPID 372 Query: 1063 SNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAAD 1122 + + ++DE SMV + + + GD +QL + PG R A Sbjct: 373 A-DVLVVDEFSMVDVPLAWHLFEAVDLSRTTVLLVGDHNQLPPVGPGNILRDLIQTRAIP 431 Query: 1123 VAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHS 1182 I+ ++VRQ L+E +++ +V + W T+ + Sbjct: 432 TVILDKVVRQAGVLKENCTAVLKGEVRKTSEA--------SVSGCRDWYLVDQFTDPMAA 483 Query: 1183 QEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNE---DRRV 1239 + L Q++ G ++T ++ + Sbjct: 484 RSFLLELFQERLDTLGFDIIKDVQ----------------------VLTPTHKGPLGTKE 521 Query: 1240 LNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAG 1299 LN + + ++ L + + R + + H + +N + Sbjct: 522 LNEELQRLIQRK------------LWNTEVPPVAMGRRAPFLKHDKVIQTRNNYDLNV-- 567 Query: 1300 ISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVAN 1359 ++ G + A G Sbjct: 568 MNGAIGYVVDVLANGTL------------------------------------------- 584 Query: 1360 SVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGT 1419 V G V L G Q + LAYA+T H QG+ A+ + Sbjct: 585 ----VIDFDGMPVELEKG----------SPDLQDLQLAYALTIHKTQGSEFPCAVVVIH- 629 Query: 1420 EGNRKLMAGFESAYVALSRMKQHVQV 1445 M Y ++R ++ V Sbjct: 630 -KAHSFMHHRNLLYTGVTRARRTAIV 654 Score = 76.0 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 95/607 (15%), Positives = 182/607 (29%), Gaps = 101/607 (16%) Query: 284 TGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLART 343 GF + A + + TP + V++A+ Y D++ + Sbjct: 149 RGFGFKKVDKIARKLGTPKDHTPRIRAGLNFCVREALDNG-------HCWIEYEDLVDQA 201 Query: 344 VGILPPENGVIE-RARAGIDEAISREQLIPLDREKGLFTSGI----HVLDELSVRALSRD 398 +L + R + +D I EQ + D G F + + EL++ + Sbjct: 202 NLLLVMDALDSRVRIESALDALIE-EQALACDSHGGRFVVALPEIVRMERELALLFGQAE 260 Query: 399 IMKQNRVTVHPEKSVPR------TAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAEL 452 + +V ++ R DAV Q S++++SG G +G+ ++ + Sbjct: 261 TPNPHFQSVKKLDALIRRCASTLNEKQLDAVRSALQ--HSISLISGGAG-SGKSYTISVI 317 Query: 453 VMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGS-------TV 505 + E EV + A ++ +++ SG I +G F+ + Sbjct: 318 NTICEESDLEVVLAAPTGKAAKRLEEVSGRSGTTIHRLLGY-DGKGFSRSKENPIDADVL 376 Query: 506 IVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR---TGTGSALMAMKDAGVNTYRWQG 562 +VD+ + + L + VL+ + G G+ L + Sbjct: 377 VVDEFSMVDVPLAWHLFEAVDLSRTTVLLVGDHNQLPPVGPGNILRDLI----------- 425 Query: 563 GEQRPATIISEPDRNVRYARLAGDFAASVKAGE---ESVAQVSGVREQAILTQAIRSELK 619 Q A D+ VR A + + +V GE S A VSG R+ Sbjct: 426 --QTRAIPTVILDKVVRQAGVLKENCTAVLKGEVRKTSEASVSGCRD------------- 470 Query: 620 TQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSH 679 L + D + ++E + + +I V + Sbjct: 471 ------------WYLVDQFTDPMAARS-------FLLELFQERLDTLGFDIIKDVQVLTP 511 Query: 680 SLTLRDAQGETQVVRISSLDSSW---SLFRPEKMPVADG--------ERLRVTGKIPGLR 728 + +G ++ L+ E PVA G +++ T L Sbjct: 512 T-----HKGPLGTKELNEELQRLIQRKLWNTEVPPVAMGRRAPFLKHDKVIQTRNNYDLN 566 Query: 729 VSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVS---DS 785 V G V V + T+V+ P L L+L Sbjct: 567 VMNGAIGYVVDVLANG-TLVIDFDGMPVELEKGSPDLQDLQLAYALTIHKTQGSEFPCAV 625 Query: 786 ATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAG 845 + + + M N G+ R+ R + + K + A Sbjct: 626 VVIHKAHSFMHHRNLLYTGVTRARRTAIVLGDHWGIQNCAKRCQVDDRRTFLPLFLDAAQ 685 Query: 846 ETSLETA 852 ++A Sbjct: 686 HADADSA 692 >UniRef50_Q5ZW46 Conjugal transfer protein TraA n=6 Tax=Legionella RepID=Q5ZW46_LEGPH Length = 889 Score = 179 bits (454), Expect = 8e-43, Method: Composition-based stats. Identities = 81/489 (16%), Positives = 162/489 (33%), Gaps = 62/489 (12%) Query: 844 AGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTE 903 A L + A + I L + + ++ F+ D+ E Sbjct: 215 ANAHYLLEENQLIQQARMELTRDNIDLVIDHLSTQYSVFTRRDVERLLFKTFQASDSPQE 274 Query: 904 LGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPG 963 + + DL+ + G +R E +L I + ++ + Sbjct: 275 YLQFVERVLGHQDLVAL-GDNNKGEPSFTTRTHLMQEAQLLHDIEAMMVSKNHVVHQPID 333 Query: 964 ELME--KLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVV 1021 L + +L+ Q A R I ++ D +VV G G GK+ + + N V+ Sbjct: 334 SLAQQYRLSEEQYEAFRYITQSPD-ISVVIGRPGTGKSYLLKPL----NEYYIQAGMEVI 388 Query: 1022 GLGPTHRAVGEMR-SAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDM 1080 G + + ++ G+ + T+ S + + + ++DE+ MV + M Sbjct: 389 GAALSGKVAKALQAETGITSSTIKSL----SYRLANDMMQLSDKHVLIIDEAGMVDFSSM 444 Query: 1081 ARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTP-ELREA 1139 G + V GD DQL+ I G+ FR R+ ++ I RQ R+A Sbjct: 445 GYLIKEAHKAGSKVVLIGDPDQLKPIQKGEIFRGIAARTG--YIELENIKRQQDLGDRQA 502 Query: 1140 VYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGE 1199 +L D+++A+ + + Sbjct: 503 SLNLAKGDIDKAIQHYQDKGAITI------------------------------------ 526 Query: 1200 AFPDVPMTLYEAIVRDY-TGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQ 1258 D + E +V D+ ++++++ + LN + + ++G+E Sbjct: 527 --TDTKLQAIEQVVADWKQDLESTNMADSIMLSYTRKAVNHLNDLAREALIVENKIGEEN 584 Query: 1259 VMVPVL-NTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTR 1317 ++ L + I GE L + L + + + I+ I L + Sbjct: 585 IVYQGLERSLKISTGERLLL---RENNKVLGVRNGDTATVKEINVQQMKIQL---DSGEL 638 Query: 1318 LISPREAVA 1326 LI P+E A Sbjct: 639 LIIPKEYKA 647 Score = 121 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 102/683 (14%), Positives = 219/683 (32%), Gaps = 70/683 (10%) Query: 317 QQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPL-DR 375 + + I LS + FT DV + E + ++ + + L+ L D Sbjct: 236 RDNIDLVIDHLSTQYSVFTRRDVERLLFKTFQASDSPQEYLQF-VERVLGHQDLVALGDN 294 Query: 376 EKGL--FTSGIHVLDELSVRALSRDIMKQNRVTVH-PEKSVPR----TAGYSDAVSVLAQ 428 KG FT+ H++ E + +M VH P S+ + + +A + Q Sbjct: 295 NKGEPSFTTRTHLMQEAQLLHDIEAMMVSKNHVVHQPIDSLAQQYRLSEEQYEAFRYITQ 354 Query: 429 DRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELIT 488 ++ G G+ + L + G EV A + ++ + ++ I Sbjct: 355 SPDISVVIGRPG--TGKSYLLKPLNEYYIQAGMEVIGAALSGKVAKALQAETGITSSTIK 412 Query: 489 GR--RQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSA 546 R + M + +I+D+ + L+ A + +V++ G Sbjct: 413 SLSYRLANDMMQLSDKHVLIIDEAGMVDFSSMGYLIKEAHKAGSKVVLI------GDPDQ 466 Query: 547 LMAMKDAGV-NTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVR 605 L ++ + + G I + D R A L Sbjct: 467 LKPIQKGEIFRGIAARTGYIELENIKRQQDLGDRQASL--------------------NL 506 Query: 606 EQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRS 665 + + +AI + +G + + + + A+ V D + +++ Sbjct: 507 AKGDIDKAI-QHYQDKGAITITDTKLQAIEQVVADWKQDLESTNMADSIMLSYTRKAVNH 565 Query: 666 HDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIP 725 + +L + + GE +V + ++ GERL + Sbjct: 566 LN-------DLAREALIVENKIGEENIVYQG---------LERSLKISTGERLLLRENNK 609 Query: 726 GLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDS 785 L V GD V ++ M + + + L + + AL ++ Sbjct: 610 VLGVRNGDTATVKEINVQQMKI----QLDSGELLIIPKEYKALDYAYALTVHKSQGMTAK 665 Query: 786 ATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAG 845 ++ N + + R + +Y+ + T + L + S + + + Sbjct: 666 KVRVLIDSKYWDRNLSFVAMTRHKEQLNIYADKENHPTEQALKQTLSRSSTKDNVIDWPL 725 Query: 846 ETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELG 905 + ++ + +A++ + V K A++ + + A F ++G Sbjct: 726 DFAIRAGFDS-----DSLISRALNHIVGVGHKIKQAYNFIVNYEASLLKARHQERFQDIG 780 Query: 906 GEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGEL 965 I + + L VD + S S+ K ++E E ++ +R+ G Sbjct: 781 QAIAD--AKQEALKVDTKEFESNDCKTSEQSFGILKKDFPQLVEL-ETLIKRRQRMTGYF 837 Query: 966 MEKLTSGQRAATRMILETSDRFT 988 EK T Q A L T+ F Sbjct: 838 AEK-TDKQIMALTQQLLTNKTFA 859 Score = 87.6 bits (215), Expect = 4e-15, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 61/140 (43%), Gaps = 13/140 (9%) Query: 1334 PDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQH 1393 ++++ TG+R+ ++++ G TV ++ + + I P + +A Sbjct: 591 ERSLKISTGERLLLRENNKVLGVRNGDTATVKEINVQQMKIQLDSGELLIIPKEYKA--- 647 Query: 1394 IDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDN---- 1449 +D AYA+T H +QG + L ++ + ++ +VA++R K+ + +Y D Sbjct: 648 LDYAYALTVHKSQGMTAKKVRVLIDSKYWDRNLS-----FVAMTRHKEQLNIYADKENHP 702 Query: 1450 -RQGWTDAINNAVQKGTAHD 1468 Q ++ + K D Sbjct: 703 TEQALKQTLSRSSTKDNVID 722 >UniRef50_B3E889 Exodeoxyribonuclease V n=2 Tax=Bacteria RepID=B3E889_GEOLS Length = 1214 Score = 178 bits (451), Expect = 2e-42, Method: Composition-based stats. Identities = 122/673 (18%), Positives = 230/673 (34%), Gaps = 109/673 (16%) Query: 897 EGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHIL--EGKEAV 954 + FT E++ +++ + R +YEAE+ I I G + Sbjct: 491 KRVEFTARYLEVDRTNLEFAMVFR---REGERDYAYLRGAYEAEREIEDRIRKLAGYSDI 547 Query: 955 M---PLMERVPGELMEKLTSGQRAATRMILETS------------DR-FTVVQGYAGVGK 998 P+ ER +L+ + S +R E + +R +VV G AG GK Sbjct: 548 TFRSPVTERHWKDLLFEAKSPLAEKSRHDYEVAIEAQAAVCAKIFNRPISVVCGAAGTGK 607 Query: 999 TTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRS-AGVDAQTLASFLHDTQL----- 1052 TT R+++ A+ ++ + L PT +A +R G +A T+ SFL Sbjct: 608 TTIIRSIIQAIEKAHGTDA-TFLLLAPTGKAADRIREKTGKEASTIHSFLARRGWLNPNL 666 Query: 1053 -QQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIA-AGGGRAVASGDTDQLQAIAPGQ 1110 + SG + T F++DE+SM+ +A + I + R + GD +QL I G+ Sbjct: 667 TLKHSGGQREDQVTTFVIDEASMLDLELLAAVFRAINWSAVQRIILVGDPNQLPPIGRGK 726 Query: 1111 PFRLQQT----RSAADVAIMKEIVRQ---------TPELREAVYSLINRD---------- 1147 F A + + +RQ T L A + N + Sbjct: 727 VFADIIEWLRKNHPASIGELTVNLRQMENRLTGKGTGILDLASIYVRNPNRDQKDEEESI 786 Query: 1148 -VERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPM 1206 E L L+ + P ++ + ++ ++ + P+ Sbjct: 787 RAELMLQRLQDLPPDGTVDKDLRVIYWKGADDLLSKIVNRIVADMEEDSGEKFN-PEAAH 845 Query: 1207 TLYEAIVRDYTGRTPEAREQTLIVTHLNED--RRVLNSMIHDV-----REKAGELGKEQV 1259 L+ A R + P +I + +ED +N I + G L + Sbjct: 846 ALWLAATRG-KEKNPRPDYHQVISPYRHEDFGTEAINLRIQQEARGVGMRRVGLLAGLTL 904 Query: 1260 MVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLI 1319 V+ N + +T ++ R + + + G + +G+ Sbjct: 905 FDKVIQVRNRGASDAIWAYNHQTRQNE---------RSSVFNGELGFVVPHALDGSK--W 953 Query: 1320 SPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQ 1379 E + + +R + + F +E GY +G + Sbjct: 954 QVPEKTYYRIKRF---QVRFSRKEHLAFAYG-KELGYA-----------------MEGTK 992 Query: 1380 TREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRM 1439 R + E+ E +++LAYAI+ H +QG+ + + + E Y ++R Sbjct: 993 KRYL--PDEKPEDNLELAYAISVHKSQGSEFERVYFVL--PKQKTALLSPELFYTGITRA 1048 Query: 1440 -KQHVQVYTDNRQGWTDAINNAVQKGT-----AHDVFEPKPD-REVMNAERLFSTARELR 1492 + + ++ I+ + F P PD E++ E F R R Sbjct: 1049 TRHCTVLIEEDIAPLLK-IHRPESSHLVGINCSLFEFTPAPDGFELIRREGFFEEGRIHR 1107 Query: 1493 DVAAGRAVLRQAG 1505 +A A++R Sbjct: 1108 TLA--EAMVRSKS 1118 >UniRef50_D2Q9V3 TrwC relaxase n=2 Tax=Bifidobacterium dentium RepID=D2Q9V3_9BIFI Length = 1394 Score = 178 bits (450), Expect = 2e-42, Method: Composition-based stats. Identities = 122/687 (17%), Positives = 220/687 (32%), Gaps = 166/687 (24%) Query: 22 NYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRLPDGADLSRMQ----------D 71 Y G+ RW G GA+ LG GSV + ++ + + D D S + D Sbjct: 34 YYTAKGNPPGRWIGSGAKLLG--GSVGRTASSKTVRSLINDSRDPSTGRFLGDVKLTKGD 91 Query: 72 GSNRHRPGYDLTFSAPKSVSMMAMLGGDKR---LIDAHNQAVDFAVRQVE-ALASTRVMT 127 G+D T PKSVS++ G + + + +A D + +E ASTR Sbjct: 92 DGEPPVAGWDYTTRQPKSVSILWAFGDAETRRGIDECLQKATDMTIAYLEDEYASTRAGQ 151 Query: 128 DGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH--NGEWKTLSSDKVGKTGF 185 G + G + +F+H +RD +PQ H H ++N + +G W L K Sbjct: 152 GGVASVACDG-VAGFVFDHFDTRDGDPQPHKHITISNRVRRSSDGVWTALDGRK------ 204 Query: 186 IENVYANQIAFGRLYREKLKEQV-EALGYET-----EVVGKHGMWEMPGVP---VEAFSG 236 +Y++ + ++ L++ + + G+ E K + E+ GVP +EAFSG Sbjct: 205 ---LYSSMVEISEIHENLLQDLLTQRFGWTWTTKVNEQGTKSVINEVDGVPAELIEAFSG 261 Query: 237 RSQTIREAVGEDASLKSRDV---------------AALDTRKSKQHVDPE--IKMAEWMQ 279 R I + V + + TRK+K + P K W + Sbjct: 262 RHSEIAKQVEQRVQQEEAQTGRPVSFQRRAQIDLEVWQATRKAKPEIQPSLAEKQRHWWK 321 Query: 280 TLKETG--FDIRAYRDAADQRADLRTLTPGPASQDGPDV-------------------QQ 318 L +T DIR D + R +D + ++ Sbjct: 322 KLGQTAPDIDIRHVWDTVNSRKTSMLHIDSTCQEDISRLLLDQIADMSRTGRNGLQLERE 381 Query: 319 AVTQAIAGLSERKVQFTYTDV-----------------------------LARTVGILPP 349 V + +S+ + + T+V LAR V + P Sbjct: 382 LVDLSYRNVSKGRTTWKKTNVRAEAERLLRSVRIDPEQRIIVANRIADLALARCVKLTPG 441 Query: 350 ENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRAL-------------S 396 + + + + D + L+TS + E + + Sbjct: 442 RYRIPQDVKDSPTLTNGNGVSVFDDDKLDLYTSREILDAEHYMIEQAGKPAVTGFTADEA 501 Query: 397 RDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMA 456 R ++ P A +A + + V G G G+ + + Sbjct: 502 RIWLQGWNEHAGRNGGYPLAADQFEAAVYALSNPRMVGAVIGPAG-TGKTTTMRAVADAW 560 Query: 457 REQ-GRE-VQIIAADRRSQMNMKQD--------------------ERLSGELITGRRQLL 494 R + G + V +A RR+ ++ ER ++ +Q+ Sbjct: 561 RAKYGPDSVLGLATSRRAVGELRNSIGCNSITIAKLLYHNDIDQIERHRRDIAVLDQQIR 620 Query: 495 EGMA----------------------FTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQV 532 P VI+D+ + + + A +V Sbjct: 621 STPDPVQRLACRMRLSRILAEESTYSIRPNQLVIIDEAGMVDTRHMAQVSRMAELMGAKV 680 Query: 533 LITDSGQR----TGTGSALMAMKDAGV 555 +T + +G G L M+ G+ Sbjct: 681 TLTGDPLQLDSVSGAGGMLGWMERHGM 707 Score = 139 bits (351), Expect = 6e-31, Method: Composition-based stats. Identities = 155/989 (15%), Positives = 276/989 (27%), Gaps = 193/989 (19%) Query: 865 QQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLY----- 919 ++ + L+ V + + ++ EA+ E + +I L Sbjct: 380 RELVDLSYRNVSKGRTTWKKTNVRAEAERLLRSVRIDPEQRIIVANRIADLALARCVKLT 439 Query: 920 ---------------------VDVAKGYGTGLLVSRASYEAEKSILRHI----------L 948 V V L SR +AE ++ Sbjct: 440 PGRYRIPQDVKDSPTLTNGNGVSVFDDDKLDLYTSREILDAEHYMIEQAGKPAVTGFTAD 499 Query: 949 EGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSA 1008 E + + E L + Q A L V G AG GKTT RAV A Sbjct: 500 EARIWLQGWNEHAGRNGGYPLAADQFEAAVYALSNPRMVGAVIGPAGTGKTTTMRAVADA 559 Query: 1009 VNMLPESERPRVVGLGPTHRAVGEMRSA-GVDAQTLASFLHDTQLQQRSGETPDFS---- 1063 + V+GL + RAVGE+R++ G ++ T+A L+ + Q D + Sbjct: 560 WR--AKYGPDSVLGLATSRRAVGELRNSIGCNSITIAKLLYHNDIDQIERHRRDIAVLDQ 617 Query: 1064 --------------------------------NTLFLLDESSMVGNTDMARAYALIAAGG 1091 N L ++DE+ MV MA+ + G Sbjct: 618 QIRSTPDPVQRLACRMRLSRILAEESTYSIRPNQLVIIDEAGMVDTRHMAQVSRMAELMG 677 Query: 1092 GRAVASGDTDQLQAI-APGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVER 1150 + +GD QL ++ G + ++ + R T + + D Sbjct: 678 AKVTLTGDPLQLDSVSGAGGMLGWMERHGMYQ--MLSSLWRFTSK-----ADKWDGDPHG 730 Query: 1151 ALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYE 1210 + + E + + E + E + L + Y Sbjct: 731 GRDSIRRWEGEGRATLELRKGGDRADPESVAACERLVQRYVDHDRLHWGEDVQLEEESYV 790 Query: 1211 AIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIR 1270 + + + TL++ + R +N R G+ + L Sbjct: 791 QCIE-----WQDQGKSTLLIAGTRDQVRDINRRFILERRSKGQSEADPAKTVALR----- 840 Query: 1271 DGELRRLSTWETHRDALVLVDNVYHRIAGISKD-DGLITLQDAEGNTRLISPREAVAEGV 1329 + R ++ I K + +T + R +S Sbjct: 841 -------DGLDVGRGDQIVCRKNEDDITSDGKSMENGMTFRIENVGRRDVSC-------- 885 Query: 1330 TLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQ 1389 + + G R + E G A TV Sbjct: 886 -------VSLVDGSRWEIPREFLETGCEAGYACTV------------------------- 913 Query: 1390 AEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDN 1449 H QG + L ++ N YVA SR K+ Y Sbjct: 914 -------------HRCQGMTVDRCAVLFPSDANTPCNLQ----YVAGSRGKEENHFYYAC 956 Query: 1450 RQGWTDAINNA------VQKGTAHDVFEPKPDREVMNAERLFSTARE-LRDVAAGRAVLR 1502 + + K A + A + RE + R + Sbjct: 957 PDEEQRKVRHQLSGVETDPKAIAMSRMKAGLLNHPDAATATETLERERTDRMDLKRLMRE 1016 Query: 1503 QA---GLAGGDSPARFIAP--GRKYPQPYVALPAFDRNGKSAGIWLNPLTTDD------- 1550 GL G +A K P+++ G+W TD Sbjct: 1017 HDYAAGLISGPHLNAMLARRHDPKTVDKITRSPSYEW---LRGVWSRAYMTDAKRALAII 1073 Query: 1551 GNGLRGFSGEGRVKGSGDAQFVALQGSR--NGESLLADNMQDGVRIARDNPDSGVVVRIA 1608 G L +GR ++ +R + + + + + ++RD+ + V I Sbjct: 1074 GQPLDPDRLKGRRPDRDQLVGKIVRTARVLHPDRMDDTTYRIDMDVSRDSEQARYVTEIL 1133 Query: 1609 GEG--RPWNPGAITGGRVWGDIPDNSVQPGAGNGEPVTAEVLAQRQAE----EAIRRETE 1662 A+ G + D+ + + + + V Q+ +RRE Sbjct: 1134 ERSDIPYALSDALDGKAITIDVDRSCIPAVKTILDGLCQTVKGFDQSLFPRWRELRREEG 1193 Query: 1663 RRADEIVRKMAENKPDLPDGKTEQAVREIAG-QERDRAAITEREAA--LPEGVLREPQRV 1719 R E +++P PD A R AG +R A+ E A +P Sbjct: 1194 RIFKENPDMRRQSRPVEPDWAATIAGRLNAGLLDRVNGAVHEEWCAGVIPRIRASRHGSE 1253 Query: 1720 REAVREIARENLLQERLQQMERDMVRDLQ 1748 + VR+ E L++ ++ ++ RD Q Sbjct: 1254 LDIVRQ--NERLIELKVGELVRDAQASNQ 1280 >UniRef50_A4JHA8 Putative uncharacterized protein n=1 Tax=Burkholderia vietnamiensis G4 RepID=A4JHA8_BURVG Length = 541 Score = 177 bits (449), Expect = 3e-42, Method: Composition-based stats. Identities = 97/428 (22%), Positives = 170/428 (39%), Gaps = 59/428 (13%) Query: 1 MMSIAQVRSAGSAGNYYTD---KDNYYVLGSMG-----ERWAGRGAEQLGLQGSVDKDVF 52 M+S A +++ +YY + +D+YY G W+G+GAE L L G V+K F Sbjct: 3 MLSNAPIKN----LDYYLNVRAQDDYYNKKDSGNKEGIGTWSGKGAEALNLVGIVEKTEF 58 Query: 53 TRLLEGRLPDGADLSRMQD--GSNRHRPGYDLTFSAPKSVSMMAMLGGD----KRLIDAH 106 R++ GR P + ++ + R G D TFSA KS +++ D KR +D Sbjct: 59 LRIMNGRNPHTSFSDKLSKYVRDDTKRHGQDFTFSANKSFTLLYNSVDDNSQLKRDLDKL 118 Query: 107 NQAVDFAVR-QVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQ----EPQLHTHAV 161 + + +R ++E + +G+ V V+ + H+TSR++ +P H H V Sbjct: 119 WKEANIILRDELEKNVQ--IRENGK--LVPASGAVIGYWEHETSREEDGKIDPNKHNHNV 174 Query: 162 VAN-VTQHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGK 220 +A NG WK++ N++ N+I + + + V LG+E V K Sbjct: 175 IAQYAMDKNGNWKSVE---------FGNLFKNKILIDAKAQAHIAKGVRELGFEI-VEDK 224 Query: 221 HGMWEMPGVPVEA---FSGRSQTIREAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEW 277 H W + G EA FSGR I + G++AS ++R A + + +K + EW Sbjct: 225 H-SWRIKGFNHEALSHFSGRRNKILKEAGKNASYRARQNQA-NVKNAKSDYNLSDLKQEW 282 Query: 278 MQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPD--------VQQAVTQAIAGLSE 329 L+ GF ++ + +++ ++ V AI SE Sbjct: 283 KDRLESFGFTPKSIESLRGDKIEIQKPVTKSDIIRLSMKLAGSKHFKKEHVNLAIEKKSE 342 Query: 330 RKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDE 389 F + I P + + ++ + + D + + E Sbjct: 343 TH-DFDKQKMYD---LIFPKNQNLYKAPTKSKEQYYYDREFVSED----HHKTNQTIDRE 394 Query: 390 LSVRALSR 397 L R Sbjct: 395 FQKNDLER 402 >UniRef50_B0P898 Putative uncharacterized protein n=3 Tax=Bacteria RepID=B0P898_9FIRM Length = 757 Score = 177 bits (448), Expect = 4e-42, Method: Composition-based stats. Identities = 93/479 (19%), Positives = 157/479 (32%), Gaps = 66/479 (13%) Query: 849 LETAISHQKSALHTPA--QQAIHLALPVVESK--KLAFSMVDLLTEAKSFAAEGTGFTEL 904 ++ + LH P + A+ AL +SK L S +L A E EL Sbjct: 207 VDAIVQKSGGDLHDPMRIKGAVFCALDEGKSKRGHLYISSEELEKSALKLLNEKIPVPEL 266 Query: 905 GGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEG------KEAVMPLM 958 + ++ A + + E R I + E + P++ Sbjct: 267 RLHQQEVRDMMQEMILNGAIVSVKDNIYLPRVFAQEDETARRIAQRLVTQMPVEHIAPVL 326 Query: 959 ERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERP 1018 E+V E+ +L++ Q AA +V+ G G GKTT R ++ L Sbjct: 327 EQVKVEMGLRLSAQQEAAVYAAF--RHGLSVITGSPGTGKTTVLRTILEVYRRLHPDG-- 382 Query: 1019 RVVGLGPTHRAVGEM-RSAGVD-AQTLASFLH---DTQLQQRSGETPDFSNTLFLLDESS 1073 ++ + PT RA M S G + A+TL S L + R+ ++ S L ++DE S Sbjct: 383 KIALMAPTGRASRRMSESTGFEDARTLHSGLGLTSEEDEGSRNRKSEPLSADLIIVDEFS 442 Query: 1074 MVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQT 1133 MV + + R V GD DQL ++ G FR V ++ +I RQ+ Sbjct: 443 MVDMWLAEKFFER-MKANARIVLVGDPDQLPSVGAGNVFREIIETQIVPVTVLDQIFRQS 501 Query: 1134 PELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQK 1193 + A +F + KL Sbjct: 502 KDSLIA-----------------------------------YNAKFINEGNTKLFYGPDF 526 Query: 1194 AMLKGEAFPDVPMTLYEAIVRDYTGRTPEAR-EQTLIVTHLNEDRRV----LNSMIHDVR 1248 + G++ D E I Y E+ E I++ + LN I ++ Sbjct: 527 VFVSGDSQEDTA----EKITERYCLEIQESGIENVQILSPFRSEGAASSEQLNETIRELV 582 Query: 1249 EKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALV--LVDNVYHRIAGISKDDG 1305 +E P + N R + + + + D + G+ G Sbjct: 583 NPFRSAEEEIKFGPRIFRVNDRIMQTKNTEKVSNGDLGFIRYIKDTDQGKKIGMDFGAG 641 Score = 53.7 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 23/135 (17%), Positives = 44/135 (32%), Gaps = 13/135 (9%) Query: 1316 TRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVS----GDS 1371 L++P + E + DR+ TK+ + + + + G Sbjct: 579 RELVNPFRSAEEEIKF---GPRIFRVNDRIMQTKNTEK--VSNGDLGFIRYIKDTDQGKK 633 Query: 1372 VTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFES 1431 + + G ++DLAYA T H A G + + +M Sbjct: 634 IGMDFGAGR--TLEYGVDDLSNVDLAYATTIHKAMG--SEYETVIMPLLKAHTIMMYRNL 689 Query: 1432 AYVALSRMKQHVQVY 1446 Y ++R K+ V + Sbjct: 690 LYTGITRAKKRVVLI 704 >UniRef50_C5EA62 ATP-dependent exoDNAse n=2 Tax=Bifidobacterium longum subsp. infantis RepID=C5EA62_BIFLO Length = 1308 Score = 177 bits (448), Expect = 4e-42, Method: Composition-based stats. Identities = 177/1058 (16%), Positives = 305/1058 (28%), Gaps = 205/1058 (19%) Query: 22 NYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLL-----EGRLPDGADLS-----RMQD 71 Y G+ RW G + LG G + + E R P+ R + Sbjct: 76 YYNAEGNPPGRWIGSASRLLG--GETGRQAGAETVRMLINERRNPETGRSLDQAGIRADN 133 Query: 72 GSNRHRPGYDLTFSAPKSVSMMAMLGGD---KRLIDAHNQAVDFAVRQVE-ALASTRVMT 127 GYDLT + PKSVS++ + + + +QA D + E A+TR Sbjct: 134 DGQPPIAGYDLTQTVPKSVSILWAFADQDTRRAIDECLHQAADMTIGYFEAEYAATRAGA 193 Query: 128 DGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH--NGEWKTLSSDKVGKTGF 185 G + T G A F+H SRD +P HTH V++N + +G+W L V Sbjct: 194 GGVASTACDGVAGFA-FDHWDSRDGDPHPHTHLVISNRVRRTTDGQWTALDGRAVYGATV 252 Query: 186 IENVYANQIAFGRLYRE---KLKEQVEALGYETEVVGKHGMWEMPGVP---VEAFSGRSQ 239 + Y + L + E A G T V E+ GVP ++AFSGR + Sbjct: 253 ELSEYNANLVKDLLTQRLGWAWHEPARARGRGTRAVAG----EVQGVPEELIDAFSGRDR 308 Query: 240 TIREAV---------------GEDASLKSRDVAALDTRKSKQHVDP--EIKMAEWMQTLK 282 I + G + L+TRK K P W L+ Sbjct: 309 EIETRLAAIIDEEERRTGHTIGWKRRAELHKQVWLETRKPKTDARPGLAELTRRWHGKLR 368 Query: 283 ET--GFDIRAYRDAADQRAD----------------LRTLTPGPASQDGPDVQQAVTQAI 324 G I A A D D L + ++++ A+ Sbjct: 369 AEAPGTSIDAMWQAVDSHRDRTIELGQTASRAAGIRLAGQLADHQTPGRTELERLADAAM 428 Query: 325 AGLSERKVQFTYTDVLARTVGILPPENGVIER--------ARAGIDEAIS---------- 366 A + +T +++ A +L A I + Sbjct: 429 AHTERTRATWTLSNIRAEAERLLADIRLDPTARADTANQVAELAIRRCVKITPTRYRAGQ 488 Query: 367 ---REQLIP-------LDREKGLFTSGIHVLDELSVRA-------LSRDIMKQNRVTVHP 409 L+ D +TS + E V A L+ + R+ Sbjct: 489 AGDDPALVSRAGRSTFDDPTLDRYTSQTILDMEKRVMATFGRTDPLAWGPGEGTRLIQSM 548 Query: 410 EKSVPR-TAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGR-EVQIIA 467 R + + A + L ++ + + + G G A GR V + Sbjct: 549 RAGGNRLSDDQAKAAAYLLENPHAASALIGPAGTGKTTTMRAVARAWETRHGRGSVLGLT 608 Query: 468 ADRRSQMNMKQDERLSGELITGRRQLLEGMA----------------------------- 498 R++ + + I + Sbjct: 609 LSVRARDELADSIGTNAITIARLLDNVSERHRAQIDDLRREYRCRLAAARTPAERDRIRR 668 Query: 499 -------------FTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGS 545 PG VIVD+ + E + + R ++++T + + Sbjct: 669 AISESDAREQAGLIHPGQLVIVDEAGMVGTPELDAIAELCERAGARLVLTGDPMQLDAPA 728 Query: 546 ALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVR 605 A + W E R AT+ S R+ G +A G Sbjct: 729 APGGLLA-------WAEREHRCATLTSL----WRFRSDPGLWANDPDGGRAR------WA 771 Query: 606 EQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLR---------DMYRPGMVM 656 ++ T +R+ G P+ V + L + YR M + Sbjct: 772 DEGKATLRLRAG----GDRAKPDSVEACRRLVAEYAAHHRLHWGEDRECEEEAYR--MTL 825 Query: 657 EQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGE 716 + + + + T+ E +V+ +S D S + + + G+ Sbjct: 826 QWQKTGKTTLLVAGTNEQVRAMNQRTIL----ERRVLGLSDGDPSRLATLSDGLKIGAGD 881 Query: 717 RLRVTGKI------PGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKL 770 R+ G R+ G V + DA+ T+P + Sbjct: 882 RIVSRANDHQVRGPDGHRIENGMAFTVTRIDTDAI-ACRDADGRQWTIP---RDWAKTNC 937 Query: 771 ENGWVETPGHSVS---DSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKL 827 E G+ T S D N R + L + + +T + Sbjct: 938 EAGYATTIHKSQGMTVDRCAAMFPSDARVPCNLQYVAATRGREENHLLYACKDEKTRQTE 997 Query: 828 ARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDL 887 A E I A + L T ++ + T + + + +S+ L Sbjct: 998 AMLSGSDTDPEAI---ARQRMLSTLLTRPDTRTATETR---------INEHEERYSLTRL 1045 Query: 888 LTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKG 925 L E +AA L ++ G + + + Sbjct: 1046 LRE-HDYAAGLIAGPHLEAKLRQCHNPGIVSMITRSPN 1082 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 106/594 (17%), Positives = 178/594 (29%), Gaps = 92/594 (15%) Query: 821 TRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKL 880 + + H T+ Q +RA L ++ ++ T ++ A+ E + Sbjct: 377 DAMWQAVDSHRDRTIELGQTASRAAGIRLAGQLADHQTPGRTELERLADAAMAHTERTRA 436 Query: 881 AFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKR-------------------GDLLYVD 921 +++ ++ EA+ A+ + Q+ GD + Sbjct: 437 TWTLSNIRAEAERLLADIRLDPTARADTANQVAELAIRRCVKITPTRYRAGQAGDDPALV 496 Query: 922 VAKGYGT------GLLVSRASYEAEKSILRHI-LEGKEAVMP----LMERVPGELMEKLT 970 G T S+ + EK ++ A P + + +L+ Sbjct: 497 SRAGRSTFDDPTLDRYTSQTILDMEKRVMATFGRTDPLAWGPGEGTRLIQSMRAGGNRLS 556 Query: 971 SGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAV 1030 Q A +LE + + G AG GKTT RAV A R V+GL + RA Sbjct: 557 DDQAKAAAYLLENPHAASALIGPAGTGKTTTMRAVARAWET--RHGRGSVLGLTLSVRAR 614 Query: 1031 GEMRSA-GVDAQTLASFLHDTQLQQRSGETPDFS-------------------------- 1063 E+ + G +A T+A L + + R+ Sbjct: 615 DELADSIGTNAITIARLLDNVSERHRAQIDDLRREYRCRLAAARTPAERDRIRRAISESD 674 Query: 1064 ----------NTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAP-GQPF 1112 L ++DE+ MVG ++ L G R V +GD QL A A G Sbjct: 675 AREQAGLIHPGQLVIVDEAGMVGTPELDAIAELCERAGARLVLTGDPMQLDAPAAPGGLL 734 Query: 1113 RLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAP 1172 + A + + R R N + K + R G A Sbjct: 735 AWAEREH--RCATLTSLWR----FRSDPGLWANDPDGGRARWADEGKATLRLRAGGDRAK 788 Query: 1173 EHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTH 1232 SV A + E + + + + TL+V Sbjct: 789 PDSVEACRRLVAEYAAHHRLHWGEDRECEEEAYRMTLQW---------QKTGKTTLLVAG 839 Query: 1233 LNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHR----DALV 1288 NE R +N R G + + L+ R +S H+ D Sbjct: 840 TNEQVRAMNQRTILERRVLGLSDGDPSRLATLSDGLKIGAGDRIVSRANDHQVRGPDGHR 899 Query: 1289 LVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTG 1342 + + + + I D I +DA+G I PR+ TI G Sbjct: 900 IENGMAFTVTRIDTD--AIACRDADGRQWTI-PRDWAKTNCEAGYATTIHKSQG 950 Score = 66.4 bits (160), Expect = 1e-08, Method: Composition-based stats. Identities = 37/223 (16%), Positives = 81/223 (36%), Gaps = 28/223 (12%) Query: 1271 DGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVT 1330 + R W+ +LV ++ +++ L R++ + + Sbjct: 818 EEAYRMTLQWQKTGKTTLLVAGTNEQVRAMNQRTIL--------ERRVLGLSDGDPSRLA 869 Query: 1331 LYTPDTIRVGTGDRMRFTKSDRE------RGYVANSVWTVTAVSGDSVTLSDGQQTREIR 1384 D +++G GDR+ +D + +TVT + D++ D + Sbjct: 870 T-LSDGLKIGAGDRIVSRANDHQVRGPDGHRIENGMAFTVTRIDTDAIACRDADGRQWTI 928 Query: 1385 PGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQ 1444 P ++ A+ + + YA T H +QG + A+ + ++ + YVA +R ++ Sbjct: 929 P-RDWAKTNCEAGYATTIHKSQGMTVDRCAAMF--PSDARVPCNLQ--YVAATRGREE-- 981 Query: 1445 VYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFST 1487 A + + T + D E + +R+ ST Sbjct: 982 ------NHLLYACKDEKTRQTEAMLSGSDTDPEAIARQRMLST 1018 >UniRef50_B9BFK7 MobA/MobL protein n=1 Tax=Burkholderia multivorans CGD1 RepID=B9BFK7_9BURK Length = 579 Score = 176 bits (446), Expect = 6e-42, Method: Composition-based stats. Identities = 68/292 (23%), Positives = 115/292 (39%), Gaps = 20/292 (6%) Query: 871 ALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGL 930 + + + K FS D+ + F T E ++ A++ L G Sbjct: 254 GVHALTATKSMFSRRDV----EQFVFRNTDGEEQFRQVYARMMNSKELIALSVPGKEGEW 309 Query: 931 LVSRASYEAEKSILRHILEGKEAVMPLMERV---PGELMEKLTSGQRAATRMILETSDRF 987 S + EK ++ A ++ P + K +GQ A +L + RF Sbjct: 310 FTSTELHHLEKRLVDRAERLSTAAAISVDDTRHDPLRMSRKFNAGQDEAF-SLLTSGRRF 368 Query: 988 TVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM-RSAGVDAQTLASF 1046 +V G AG GK+ +A A+ E++ RV+G + +M R +G+ ++TL S Sbjct: 369 AIVNGAAGTGKSYVLKAAREAL----EADGFRVIGAALQGKTADDMERDSGIRSRTLHSL 424 Query: 1047 LHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAI 1106 L G T+ +DE+ MVG+ M + + G GD Q+ A+ Sbjct: 425 LGSLD----KGSLKLDDKTIVFVDEAGMVGSRQMEKLLEHVERSGALIRMVGDAYQIHAV 480 Query: 1107 APGQPFRLQ--QTRSAADVAIMKEIVRQTPEL-REAVYSLINRDVERALSGL 1155 G FR S +A + EI RQ E R+A +L ++ A++ Sbjct: 481 DAGDAFRAVSKMAESVGALASLTEIKRQKEEWQRQASEALSRHEISAAITAY 532 Score = 91.5 bits (225), Expect = 3e-16, Method: Composition-based stats. Identities = 49/272 (18%), Positives = 89/272 (32%), Gaps = 18/272 (6%) Query: 324 IAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLD---REKGLF 380 + L+ K F+ DV E E+ R ++ ++LI L +E F Sbjct: 255 VHALTATKSMFSRRDVEQFVFRNTDGE----EQFRQVYARMMNSKELIALSVPGKEGEWF 310 Query: 381 TSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPR------TAGYSDAVSVLAQDRPSLA 434 TS E + + + ++V + P AG +A S L A Sbjct: 311 TSTELHHLEKRLVDRAERLSTAAAISVDDTRHDPLRMSRKFNAGQDEAFS-LLTSGRRFA 369 Query: 435 IVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLL 494 IV+G G G+ + G V A ++ +M++D + + L Sbjct: 370 IVNGAAG-TGKSYVLKAAREALEADGFRVIGAALQGKTADDMERDSGIRSRTLHSLLGSL 428 Query: 495 EGMAFTPG--STVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMKD 552 + + + V VD+ + ++ LL+ R + + + A A + Sbjct: 429 DKGSLKLDDKTIVFVDEAGMVGSRQMEKLLEHVERSGALIRMVGDAYQIHAVDAGDAFR- 487 Query: 553 AGVNTYRWQGGEQRPATIISEPDRNVRYARLA 584 A G I + + R A A Sbjct: 488 AVSKMAESVGALASLTEIKRQKEEWQRQASEA 519 >UniRef50_Q6MDD6 Putative exodeoxyribonuclease V n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MDD6_PARUW Length = 721 Score = 176 bits (446), Expect = 7e-42, Method: Composition-based stats. Identities = 105/559 (18%), Positives = 186/559 (33%), Gaps = 97/559 (17%) Query: 774 WVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSF 833 +++ G S + + +F ++ N + RD+ A+K+ Sbjct: 150 FLQGHGVSPAFAQKIFKKYGSQSILKLKDNPYCLA-RDIFGVGFKTADTVAQKMGI---- 204 Query: 834 TVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKS 893 ++ E + I + S L + + + + L EA++ Sbjct: 205 --------SKDSEQRIGAGIEYVLSQLSGDG--------------HVCYPVDEFLKEAET 242 Query: 894 FAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEA 953 E E +R L + + +G + + + AE I R + K Sbjct: 243 HLEVKADLIEKRLEGLQSEERIILAQL-IHEGKKRDFIWIKPLFIAETGIARELKRLKNG 301 Query: 954 V--------MPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAV 1005 V +E V +L +L Q+ A + T + ++ G G GK+T A+ Sbjct: 302 VSTFRSINKEKAVEWVQAQLKIELAPNQKEAVAKAIST--KLHIITGGPGTGKSTITNAI 359 Query: 1006 MSAVNMLPESERPRVVGLGPTHRAVGEMRS-AGVDAQTLASFL----HDTQLQQRSGETP 1060 + +L + +++ PT RA M A T+ S L T +R+ E P Sbjct: 360 LQITAILTQ----KILLAAPTGRAAKRMSEITKRKASTIHSLLEYDFKSTGGFKRNRENP 415 Query: 1061 DFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSA 1120 L ++DE+SM+ M + R + GD QL ++ PG T Sbjct: 416 -LDCDLIIIDEASMIDTFLMYSLLKALPDHT-RVIFVGDIHQLPSVGPGNVLSDMITSLT 473 Query: 1121 ADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFS 1180 V +KEI RQ A S I + R G+ F Sbjct: 474 ISVTTLKEIFRQ------AAGSHIITNAHRVNKGM-----------------------FP 504 Query: 1181 HSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVL 1240 + ++ + E + + L + + G P N+D +VL Sbjct: 505 SLYNGQNSDFFFIECQENEEVLNTIVKLVSQRLPNRYGFNP------------NQDIQVL 552 Query: 1241 NSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGI 1300 M K G +G E + + N ++ L R D ++ + N Y + Sbjct: 553 APM------KKGLIGTEHLNQSLQMILNPKEHALFRGGQKFQVGDKVMQIRNDYQKEV-F 605 Query: 1301 SKDDGLITLQDAEGNTRLI 1319 + D G I D+E LI Sbjct: 606 NGDIGYILNIDSEEQQVLI 624 Score = 59.1 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 48/303 (15%), Positives = 97/303 (32%), Gaps = 31/303 (10%) Query: 297 QRADLRTLTPGPASQDGPDVQQAVTQAIAGLS-ERKVQFTYTDVLARTVGILPPENGVIE 355 + AD G + + + ++ LS + V + + L L + +IE Sbjct: 193 KTADTVAQKMGISKDSEQRIGAGIEYVLSQLSGDGHVCYPVDEFLKEAETHLEVKADLIE 252 Query: 356 RARAGI--DEAISREQLIPLDREKG------LFTSGIHVLDELSVRA-----LSRDIMKQ 402 + G+ +E I QLI +++ LF + + EL ++ Sbjct: 253 KRLEGLQSEERIILAQLIHEGKKRDFIWIKPLFIAETGIARELKRLKNGVSTFRSINKEK 312 Query: 403 NRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGRE 462 V + + +AV+ A I G G G+ ++ + ++ Sbjct: 313 AVEWVQAQLKIELAPNQKEAVAK-AISTKLHIITGGPG--TGKSTITNAILQITAILTQK 369 Query: 463 VQIIAADRRSQMNMKQDERLSGELITGRRQ--LLEGMAFTPGS-------TVIVDQGEKL 513 + + A R+ M + + I + F +I+D+ + Sbjct: 370 ILLAAPTGRAAKRMSEITKRKASTIHSLLEYDFKSTGGFKRNRENPLDCDLIIIDEASMI 429 Query: 514 SLKETLTLLDGAARHNVQVLITDSGQ--RTGTGSALMAMKDA---GVNTYRWQGGEQRPA 568 +LL H + + D Q G G+ L M + V T + + + Sbjct: 430 DTFLMYSLLKALPDHTRVIFVGDIHQLPSVGPGNVLSDMITSLTISVTTLKEIFRQAAGS 489 Query: 569 TII 571 II Sbjct: 490 HII 492 Score = 58.7 bits (140), Expect = 2e-06, Method: Composition-based stats. Identities = 21/151 (13%), Positives = 51/151 (33%), Gaps = 14/151 (9%) Query: 1316 TRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVS--GDSVT 1373 +++P+E L+ + GD++ ++D ++ + + + V Sbjct: 570 QMILNPKEH-----ALFRGGQ-KFQVGDKVMQIRNDYQKEVFNGDIGYILNIDSEEQQVL 623 Query: 1374 LSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAY 1433 + + + LAYAI+ H QG+ + T ++ Y Sbjct: 624 IQFEDKEVVYDYTDLDE---LILAYAISVHKFQGSECPCVVMPVHTS--HFMLLHRNLLY 678 Query: 1434 VALSRMKQHVQVYTDNRQGWTDAINNAVQKG 1464 ++R K + V ++ A+ + Sbjct: 679 TGITRGK-KLVVLVGTKKALAIAVKKDDVQK 708 >UniRef50_A3FG49 ORF16 n=1 Tax=Amycolatopsis benzoatilytica RepID=A3FG49_9PSEU Length = 1558 Score = 176 bits (445), Expect = 8e-42, Method: Composition-based stats. Identities = 141/855 (16%), Positives = 252/855 (29%), Gaps = 176/855 (20%) Query: 13 AGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQ--GSVDKDVFTRLL-EGRLPDGAD---- 65 A Y+ G RW G G + LG++ + D ++ E + P+ + Sbjct: 48 AAGYFLSAQ---QHGEAAGRWYGNGLDMLGMKAGSAATADDVRKVFGELKDPNSGEYLGR 104 Query: 66 ------------------------------LSRMQDGSNRHRPGYDLTFSAPKSVSMMA- 94 + + YD TFS KSVS+ Sbjct: 105 APRQFKDYDARVAAAVKREPNATPERLKEIQDAARTDGRKAVAYYDFTFSPVKSVSVYYT 164 Query: 95 ------MLGGDKRLIDAHNQAVDFAVRQVEAL-ASTRVMTDGQS-------ETVLTGNLV 140 +++ AH +AVD A+ +E A R G++ + L Sbjct: 165 ALVSAGAHEAADKVLKAHREAVDVALGYLEKHGAYVRTGYHGKTVNGRSVGKYERATGLN 224 Query: 141 MALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLY 200 + F+H TSR EPQLH HA V N Q SD V + + + A Y Sbjct: 225 VIKFDHSTSRANEPQLHCHAAVLNRVQTE-------SDGVIRALDAKGFRPIKEAVSVAY 277 Query: 201 REKLKEQVE-ALGYETEVVGKHGMWEMPGVP---VEAFSGRSQTIRE-----------AV 245 L++++ LG E+ GV S R + E Sbjct: 278 ERALEDKLTAELGVRFAQRPDGKAREILGVDPTLCTEASSRRAQVEERSAELIEAYVDRH 337 Query: 246 GEDASLKSR----DVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADL 301 G + S +R +A LDTR++K + W D +AA + + Sbjct: 338 GREPSAAARKAIAQMATLDTREAKGPEAGPQALRAWGDERAGRLADTLDQVEAAAAKIER 397 Query: 302 RTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGI 361 D D Q + A+ + + +T +++A + E A I Sbjct: 398 EGHPDAKVMPDQRDRQAILRAAVEDVQAQYPTWTLGNLVAAVDRQVISLPCTPEERPAYI 457 Query: 362 D------------------------------EAISREQLIPLDREKGLFTSGIHVLDELS 391 + + +LI ++T+ H+ E Sbjct: 458 EGMAREALAAGNDYGVLTLTAPDPVAVPTPLQRPDDGRLIYRPHMDEVYTTEKHLDTERR 517 Query: 392 VRALSRDIMKQNRVTVHPE------KSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQ 445 + +R E + T AV + + ++ G G G+ Sbjct: 518 IVVGARQQTAPAISGPELEMLKVELSATTLTEDQRAAVLGIVSSGRAADVLIGPAG-TGK 576 Query: 446 RERVAELVMM-AREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLL-------EGM 497 VA L ++ G V +A +R+ + + S ++ Sbjct: 577 SYTVATLTQAWSQNTGGRVMGLATSQRATDVLNSEGLDSINTSQFLKRFTPDETTGEARD 636 Query: 498 AFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSA--LMAMKDAGV 555 PG +VD+ E + + ++L T ++ A ++ + Sbjct: 637 QVRPGDLFVVDEAGMSGTDELARISALVEQGGGKLLYTGDHRQLAAVKAGGMLELLANDN 696 Query: 556 NTYRWQGGEQRPA---------------TIISEPDRNVRY---------ARLAGDFAASV 591 Y + + A +++SE D R + A Sbjct: 697 GAYELESVRRFEADWEKQASIRLRVGDTSVLSEYDDRGRLRGGTMEEMREAAVRGYVADT 756 Query: 592 KAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYR 651 G +S+ V + L+ IR++L G + +T ++ Sbjct: 757 LEGLDSLLIVRSNDDATDLSAEIRAQLVELGKVDSEVLT------------QARDGNLIS 804 Query: 652 PGMVMEQWNPET-----------RSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDS 700 G V++ + + Y + V + L A G T + S +D Sbjct: 805 VGDVIQARKNNYDIEVQGGRGMVVNREVYTVRGVDDRGR-LIAETADGATAYLPDSYVDQ 863 Query: 701 SWSLFRPEKMPVADG 715 +L A G Sbjct: 864 HVTLAYASTKHAAQG 878 Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats. Identities = 106/493 (21%), Positives = 184/493 (37%), Gaps = 78/493 (15%) Query: 911 QIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSIL--RHILEGKEAVMPLMERVPGEL-ME 967 + G L+Y + + + + E+ I+ P +E + EL Sbjct: 490 RPDDGRLIYRP----HMDEVYTTEKHLDTERRIVVGARQQTAPAISGPELEMLKVELSAT 545 Query: 968 KLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTH 1027 LT QRAA I+ + V+ G AG GK+ + A + + RV+GL + Sbjct: 546 TLTEDQRAAVLGIVSSGRAADVLIGPAGTGKSYTVATLTQAWSQ---NTGGRVMGLATSQ 602 Query: 1028 RAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPD--FSNTLFLLDESSMVGNTDMARAYA 1085 RA + S G+D+ + FL + +GE D LF++DE+ M G ++AR A Sbjct: 603 RATDVLNSEGLDSINTSQFLKRFTPDETTGEARDQVRPGDLFVVDEAGMSGTDELARISA 662 Query: 1086 LIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLIN 1145 L+ GGG+ + +GD QL A+ G L + A ++ + R Sbjct: 663 LVEQGGGKLLYTGDHRQLAAVKAGGMLELLANDNGA--YELESVRR-------------- 706 Query: 1146 RDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVP 1205 E W + S+ + L+E + L+G + Sbjct: 707 --------------------FEADWEKQASIR-LRVGDTSVLSEYDDRGRLRGGTMEE-- 743 Query: 1206 MTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLN 1265 + EA VR Y T E + LIV N+D L++ I + G++ E + Sbjct: 744 --MREAAVRGYVADTLEGLDSLLIVR-SNDDATDLSAEIRAQLVELGKVDSEVLT----- 795 Query: 1266 TANIRDGELRRLSTWETHRDALVLVDNVYHRIA----GISKDDGLITLQDAEGNTRLISP 1321 R + D + N Y G+ + + T++ + RLI+ Sbjct: 796 --------QARDGNLISVGDVIQARKNNYDIEVQGGRGMVVNREVYTVRGVDDRGRLIA- 846 Query: 1322 REAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTR 1381 A+G T Y PD+ + + + +V T +S D V+++ G+Q Sbjct: 847 --ETADGATAYLPDSY---VDQHVTLAYASTKHAAQGRTVDTGHTLSPDYVSMTRGKQCN 901 Query: 1382 E-IRPGQEQAEQH 1393 + A++H Sbjct: 902 TAYLVTERPADEH 914 Score = 55.6 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 55/167 (32%), Gaps = 27/167 (16%) Query: 1339 VGTGDRMRFTKSDRERGY-------VANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAE 1391 + GD ++ K++ + V V+TV V +++ + Sbjct: 803 ISVGDVIQARKNNYDIEVQGGRGMVVNREVYTVRGVDDRGRLIAETADGATAYLPDSYVD 862 Query: 1392 QHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQ--HVQVYT-- 1447 QH+ LAYA T H AQG + L YV+++R KQ + T Sbjct: 863 QHVTLAYASTKHAAQGRTVDTGHTLSPD-------------YVSMTRGKQCNTAYLVTER 909 Query: 1448 --DNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELR 1492 D + A+ + F+P E + R L Sbjct: 910 PADEHEPERLAVTPVAAMAAELESFDPSQAAE-LEHRAAAEEGRSLS 955 >UniRef50_A8ZLV4 Helicase, RecD/TraA family n=18 Tax=Cyanobacteria RepID=A8ZLV4_ACAM1 Length = 753 Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats. Identities = 106/502 (21%), Positives = 184/502 (36%), Gaps = 66/502 (13%) Query: 774 WVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSF 833 +++ G S + + +F +++ T N R DV + A L P Sbjct: 162 FLQGHGVSTTYAVKIFKQYGDESIETVTHNPY-RLATDVYGIGFVTADEIARSLGISPHS 220 Query: 834 TVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKS 893 + + R+G L A++ H LP E A + L Sbjct: 221 -----EYRYRSG----------LLHVLSESAEEG-HCYLPQPELIDRAVKRLAL----PD 260 Query: 894 FAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLL-VSRASYEAEKSILRHILE--- 949 + + ++ I+A I +L+ + T LL + ++AE + R +L+ Sbjct: 261 YQPKP---DQVEYLIHAMISDAELIVERLTHEGSTKLLCYAPPFFQAEFHLSRRVLQLLA 317 Query: 950 -----GKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRA 1004 E V ++R + L+ Q+ A M R ++ G G GKT R Sbjct: 318 SSLVVDNERVRAWLDRFMAQTDVSLSKQQQQAVEMAAS--QRVVILTGGPGTGKTFTTRT 375 Query: 1005 VMSAVNMLPESERPRVVGLGPTHRAVGEMRS-AGVDAQTLASFLH---DTQLQQRSGETP 1060 +++ L ++ +V PT RA + G +A+T+ L T QR+ + P Sbjct: 376 IVA----LWKAMGKDIVLASPTGRAAQRLSEVTGHEAKTIHRLLEFDPKTMKFQRNSDNP 431 Query: 1061 DFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSA 1120 ++ + ++DE+SM+ +A + + + GDTDQL ++ PG T Sbjct: 432 IPADAV-VIDEASMLDL-FLANSLIKAIDTNAQLLLVGDTDQLPSVGPGNVLLDLITSGR 489 Query: 1121 ADVAIMKEIVRQTPELREAVYSLINRDVERALSG----LESVKPSQVPR--QEGAWAPEH 1174 + + E+ RQ A S I R+ R G LESV PS GA PE+ Sbjct: 490 IPIIELTEVFRQ------AQASHIIRNAHRINQGQFPNLESVSPSPKTDCLWLGAPEPEN 543 Query: 1175 SVTEFSHSQEAKLAEAQQK---------AMLKGEAFPDVPMTLYEAIVRDYTGRTPEARE 1225 V L E + M +GE + +A++ PE Sbjct: 544 GVQAIQELINDLLPELGFQPARDVQVLCPMTRGEVGTRKLNQVLQALINPPCPDKPELTR 603 Query: 1226 QTLIVTHLNEDRRVLNSMIHDV 1247 LI+ + + +N +V Sbjct: 604 GGLILRVGDRVLQQVNDYNREV 625 Score = 73.3 bits (178), Expect = 8e-11, Method: Composition-based stats. Identities = 87/612 (14%), Positives = 185/612 (30%), Gaps = 98/612 (16%) Query: 294 AADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGV 353 AD+ A ++P + + ++++ E +++ R V L + Sbjct: 206 TADEIARSLGISPHSEYRYRSGLLHVLSESAE---EGHCYLPQPELIDRAVKRLALPDYQ 262 Query: 354 I--ERARAGIDEAISREQLI--PLDREKGL---------FTSGIHVLDELSVRALSRDIM 400 ++ I IS +LI L E F + H+ + S ++ Sbjct: 263 PKPDQVEYLIHAMISDAELIVERLTHEGSTKLLCYAPPFFQAEFHLSRRVLQLLASSLVV 322 Query: 401 KQNRVTVHPEKSVPRT----AGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMA 456 RV ++ + +T + +A + + + G G G+ +V + Sbjct: 323 DNERVRAWLDRFMAQTDVSLSKQQQQAVEMAASQRVVILTGGPG--TGKTFTTRTIVALW 380 Query: 457 REQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLL-EGMAFTPGS-------TVIVD 508 + G+++ + + R+ + + + I + + M F S V++D Sbjct: 381 KAMGKDIVLASPTGRAAQRLSEVTGHEAKTIHRLLEFDPKTMKFQRNSDNPIPADAVVID 440 Query: 509 QGEKLSLKETLTLLDGAARHNVQVLITDSGQR---TGTGSALMAMKDAGVNTYRWQGG-- 563 + L L +L+ A N Q+L+ + G G+ L+ + +G Sbjct: 441 EASMLDLFLANSLI-KAIDTNAQLLLVGDTDQLPSVGPGNVLLDLITSGRIPIIELTEVF 499 Query: 564 EQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQ--AILTQAIRSELKTQ 621 Q A+ I + + + S + + + E + + I L Sbjct: 500 RQAQASHIIRNAHRINQGQFPNLESVSPSPKTDCLWLGAPEPENGVQAIQELINDLLPEL 559 Query: 622 GVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSL 681 G P + L P + R + + V++ D+ L Sbjct: 560 GF--QPARDVQVLCP--MTRGEVGTRKLNQ---VLQALINPP------CPDKPELTRGGL 606 Query: 682 TLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVS 741 LR G+R+ V GD + ++ Sbjct: 607 ILR-----------------------------VGDRVLQQVNDYNREVFNGDMGVIEDIN 637 Query: 742 EDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNAT 801 + + V V + ++D + L + Q Sbjct: 638 LEEIEVTVHYAERSVSYDLAD--LNEIGLAWAVTIHKSQGSEYPVVILPLYMQH------ 689 Query: 802 LNGLARSGRDVRLYSSLDE-TRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSAL 860 L+R+ LY+ L + A + + ++ QIK R T LE + Sbjct: 690 YIMLSRN----LLYTGLTRAKKLAILVGPKNAISMAIRQIKDRQRYTLLERRLGGV---- 741 Query: 861 HTPAQQAIHLAL 872 A +++ A+ Sbjct: 742 -PKANESLASAI 752 Score = 60.3 bits (144), Expect = 7e-07, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 40/108 (37%), Gaps = 3/108 (2%) Query: 1339 VGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAY 1398 + GDR+ +D R + + ++ + + ++ R + I LA+ Sbjct: 608 LRVGDRVLQQVNDYNREVFNGDMGVIEDINLEEIEVTVHYAERSV-SYDLADLNEIGLAW 666 Query: 1399 AITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVY 1446 A+T H +QG+ I +M Y L+R K+ + Sbjct: 667 AVTIHKSQGSEYPVVILPLY--MQHYIMLSRNLLYTGLTRAKKLAILV 712 >UniRef50_D2L9I1 MobA/MobL protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L9I1_9DELT Length = 945 Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 72/320 (22%), Positives = 130/320 (40%), Gaps = 19/320 (5%) Query: 872 LPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLL 931 L + +++ F+ +L K E E + + + + +G TGL Sbjct: 282 LEKLTARQCLFTERELNAVLKKAGVE--DMIEREAAKQRVLSCPECVKLYDGQGQETGLY 339 Query: 932 VSRASYEAEKSIL----RHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRF 987 S E++IL R + EG V R + L QR A ++ ++R Sbjct: 340 TSTLVRAEERAILELTDRKMREGGGHVSE-RARQQALSRKTLDPEQREAFD-VMTAANRL 397 Query: 988 TVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGV-DAQTLASF 1046 V+QG AG GK+ A A E + RVVGL PT+ +M + G +A T+ + Sbjct: 398 CVIQGRAGAGKSYTMGAARDAF----EVDGWRVVGLAPTNTVSRDMHTDGFQEASTVHAE 453 Query: 1047 LHDTQLQQ---RSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQL 1103 L + + RS T+ +DE++M+ N M R G + V GD QL Sbjct: 454 LLRQEKARTNPRSRVKAWDRKTVVFVDEAAMLDNRTMHRLLQQADVSGAKVVMIGDDAQL 513 Query: 1104 QAIAPGQPFRLQQTRSAADVAIMKEIVRQTPE-LREAVYSLINRDVERALSGLESVKPSQ 1162 +I G + + R D A++ + RQ + +R+A L + ++ A++ + + Sbjct: 514 ASIQRGGMY--TEIRQKTDSALISLVRRQKQDWMRQASMDLADGKIKEAMTAYQEHDCIK 571 Query: 1163 VPRQEGAWAPEHSVTEFSHS 1182 ++ + + + + Sbjct: 572 AAKEPIEVLLQDWKRDVARN 591 Score = 98.0 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 111/738 (15%), Positives = 224/738 (30%), Gaps = 129/738 (17%) Query: 236 GRSQTIREAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAA 295 R A+ + D A + K V + +++E + + F+ R + Sbjct: 181 TRRLGREGLDKHKATDLNPDFAR---KNGKGFVSTQDRISEKWEAFQNRYFEEREFELRV 237 Query: 296 DQRADLRTLTPGPASQDGPDVQQAVTQA----------------IAGLSERKVQFTYTDV 339 D R + L G A + A +A + L+ R+ FT ++ Sbjct: 238 DPRGVVFQLHEGKARHIEASWKTAENEARLEDARQTALVEPKTILEKLTARQCLFTEREL 297 Query: 340 LARTVGILPPENGVIERARAGIDEAISREQLIPL----DREKGLFTSGIHVLDELSVRAL 395 A + E+ + A +S + + L +E GL+TS + +E ++ L Sbjct: 298 NA-VLKKAGVEDMI--EREAAKQRVLSCPECVKLYDGQGQETGLYTSTLVRAEERAILEL 354 Query: 396 SRDIMKQN------RVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERV 449 + M++ R +A + L ++ G+ G AG+ + Sbjct: 355 TDRKMREGGGHVSERARQQALSRKTLDPEQREAFD-VMTAANRLCVIQGRAG-AGKSYTM 412 Query: 450 AELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGS------ 503 G V +A +M D + E P S Sbjct: 413 GAARDAFEVDGWRVVGLAPTNTVSRDMHTDGFQEASTVHAELLRQEKARTNPRSRVKAWD 472 Query: 504 ---TVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMKDAGVNTYRW 560 V VD+ L + LL A +V++ + L +++ G+ T Sbjct: 473 RKTVVFVDEAAMLDNRTMHRLLQQADVSGAKVVMIGDDAQ------LASIQRGGMYTEIR 526 Query: 561 QGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKT 620 Q +S R++ + +L Sbjct: 527 QKT--------------------------------DSALISLVRRQKQDWMRQASMDL-A 553 Query: 621 QGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPE-TRSHD--RYVIDRVTAQ 677 G + MTA ++ + ++++ W + R+ D R++ + + Sbjct: 554 DGKIKEA---MTAYQEHDCIKAAKEPIE-----VLLQDWKRDVARNPDVNRFIYAGINTE 605 Query: 678 SHSLTLRDAQ-----GETQVVRISSLDSSWSLFRPEKMPVADGERLRV--TGKIPGLRVS 730 + + ++ G+ + + + F+ + G+R++ T K + Sbjct: 606 VNRINDACSKTMRELGKVRGGITYACEKGEKKFQQT---IGVGDRIQFNATAKNIDKNLI 662 Query: 731 GGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSAT-VF 789 G+ V S+ + V + A VS +P G+ T + T V+ Sbjct: 663 NGNFGTVQKQSQKQIEVRLDSGAM-----VSFNPGEYKGFALGYAGTVYKGQGKTQTDVY 717 Query: 790 ASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTV------------VS 837 A + T G R + LY ++ + E+LAR S + + Sbjct: 718 ALHGVTWNNRTTYVGATRHKGNFTLYVDSEKVKGFEQLARSMSRSQDRASTLGYLDERQA 777 Query: 838 EQIKTRAGETSLETAISHQKSALHTPAQQAIH--------LALPVVESKKLAFSMVDLLT 889 Q+K R + +S + P+ A A ++ F+ + Sbjct: 778 NQVKERGRDRDGPALTLPGRSRVEEPSLDAPKLEIDPERLRAAREARDRQERFANPEKAR 837 Query: 890 EAKSFAAEGTGFTELGGE 907 E A T + Sbjct: 838 EHIQAKARELRETITARD 855 Score = 75.7 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 61/156 (39%), Gaps = 17/156 (10%) Query: 1336 TIRVGTGDRMRF--TKSDRERGYVANSVWTVTAVSGDSVTLS-DGQQTREIRPGQEQAEQ 1392 +G GDR++F T + ++ + + TV S + + D PG+ + Sbjct: 639 QQTIGVGDRIQFNATAKNIDKNLINGNFGTVQKQSQKQIEVRLDSGAMVSFNPGE---YK 695 Query: 1393 HIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNR-- 1450 L YA T + QG ++T AL G + + YV +R K + +Y D+ Sbjct: 696 GFALGYAGTVYKGQGKTQTDVYALHG------VTWNNRTTYVGATRHKGNFTLYVDSEKV 749 Query: 1451 ---QGWTDAINNAVQKGTAHDVFEPKPDREVMNAER 1483 + +++ + + + + + +V R Sbjct: 750 KGFEQLARSMSRSQDRASTLGYLDERQANQVKERGR 785 >UniRef50_B8I4C3 Exonuclease V subunit alpha n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I4C3_CLOCE Length = 813 Score = 170 bits (429), Expect = 6e-40, Method: Composition-based stats. Identities = 117/686 (17%), Positives = 220/686 (32%), Gaps = 123/686 (17%) Query: 779 GHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSE 838 G S + + ++ + ++ A N + D+R + A KL P E Sbjct: 196 GVSSAKAMKIYNNFKGTSIAIAEQNPYMFA--DIRGFGFKSCDEIARKLGIDPHSVFRLE 253 Query: 839 QIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEG 898 A ++ L+TA + L ++++ +A S Sbjct: 254 ----AALKSVLQTAEADGNCYLLKA-------------------KLLEMTAKALSNPDVT 290 Query: 899 TGFTELGGEINAQIKRGDLLYVDVAKGYGT-GLLVSRASYEAEKSILRHILEGKE----- 952 EL N +K G L+ + ++ + + ++ Y+ E I E Sbjct: 291 VTTDELEDAYNRMLKSGSLVNITFSEDQQSFEAVYTKEMYKIEYETALAIKEIARCQPDV 350 Query: 953 ---AVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAV 1009 +V L+E L S Q+ A + + T+ ++ G AG GKTT ++ + Sbjct: 351 PMFSVDKLIEEFEAMRGFNLESMQKEAVKAVFNTN--MLILTGSAGSGKTTTVECMIYVL 408 Query: 1010 NMLPESER-PRVVGLGPTHRAVGEMRS-AGVDAQTLASFL----HDTQLQQRSGETPDFS 1063 E + + PT +A + G +A TL L + R G + Sbjct: 409 QRYFEKQEEMSFMLAAPTGKAAKRLTEITGFEAMTLHRLLQFSYENKGFFYRQGNELPY- 467 Query: 1064 NTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADV 1123 L ++DESSM+ D+A A + G V GDT Q+ ++ G Sbjct: 468 -DLIVVDESSMLS-IDLAHALFTAISPGTTVVLIGDTQQIPSVGAGNVLDDMIKSGVIPT 525 Query: 1124 AIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQ 1183 + I RQ + + A + P + + + E Sbjct: 526 VKLNVIKRQED---------GSGIIFNANRIINGEMPEIINANKDFFIVEE--------- 567 Query: 1184 EAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSM 1243 + + + + + + MT Y + D P+ + E + + M Sbjct: 568 -----DDKNRVIKRTLEALNRLMTGYNYTIDDVQVICPQKTSEL----GTYEMNKAIQEM 618 Query: 1244 IHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKD 1303 + N A E++R ++ D ++ ++N Y Sbjct: 619 V--------------------NPAAAGKAEVKRGNSVFRQGDKVIHLNNNY--------- 649 Query: 1304 DGLITLQDAEGNTRLISPREAVAEGVTLYT---PDTIRVGTGDRMRFTKSDRERGYVANS 1360 + +DA+ + EG ++ I + + D E N+ Sbjct: 650 EATHYHKDAKTGRYIAD------EGSGVFNGDIGRIIEISKIGEIDQESEDGEAAGDNNT 703 Query: 1361 VWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTE 1420 V + + + Q + IDLAY++T H QG+ AI L Sbjct: 704 EEKVAVQYDEFIII-----------YQINELEEIDLAYSLTVHKMQGSQCEAAIFLCH-- 750 Query: 1421 GNRKLMAGFESAYVALSRMKQHVQVY 1446 +M Y A++R K+ + Sbjct: 751 LRNYIMLNRNLGYTAVTRAKRMACII 776 Score = 63.7 bits (153), Expect = 7e-08, Method: Composition-based stats. Identities = 43/315 (13%), Positives = 101/315 (32%), Gaps = 38/315 (12%) Query: 287 DIRAY-RDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVG 345 DIR + + D+ A + P + ++ + A A + ++ ++ A+ + Sbjct: 226 DIRGFGFKSCDEIARKLGIDPHSVFRLEAALKSVLQTAEADGNCYLLKAKLLEMTAKALS 285 Query: 346 ILPPENGVIERARAGIDEAISREQLIPLD--REKGLFT---SGIHVLDELSVRALSRDIM 400 P + + + L+ + ++ F + E AL+ + Sbjct: 286 N-PDVTVTTDELEDAYNRMLKSGSLVNITFSEDQQSFEAVYTKEMYKIEYET-ALAIKEI 343 Query: 401 KQNRVTVHP------------EKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRER 448 + + V + + +AV + ++ I++G G +G+ Sbjct: 344 ARCQPDVPMFSVDKLIEEFEAMRGFNLESMQKEAVKAVF--NTNMLILTGSAG-SGKTTT 400 Query: 449 VAELVMMAR-----EQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLL--------E 495 V ++ + + ++ + A ++ + + + Q Sbjct: 401 VECMIYVLQRYFEKQEEMSFMLAAPTGKAAKRLTEITGFEAMTLHRLLQFSYENKGFFYR 460 Query: 496 GMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQ--RTGTGSALMAMKDA 553 P ++VD+ LS+ L + VLI D+ Q G G+ L M + Sbjct: 461 QGNELPYDLIVVDESSMLSIDLAHALFTAISPGTTVVLIGDTQQIPSVGAGNVLDDMIKS 520 Query: 554 GVNTYRWQGGEQRPA 568 GV +R Sbjct: 521 GVIPTVKLNVIKRQE 535 >UniRef50_A5IZI9 Exodeoxyribonuclease V alpha chain n=1 Tax=Mycoplasma agalactiae PG2 RepID=A5IZI9_MYCAP Length = 756 Score = 169 bits (428), Expect = 8e-40, Method: Composition-based stats. Identities = 56/263 (21%), Positives = 101/263 (38%), Gaps = 18/263 (6%) Query: 876 ESKKLAFSMVDLLTEAKSFAAEGTGFTE--LGGEINAQIKRGDLLYVDVAKGYGTGLLVS 933 F ++ S + ++ + +N I+RG++ + +K + Sbjct: 264 SDNSTLFEQSYIV-SLLSLLLQKRDISDDLIIESLNVMIQRGEVYFDSDSKRLSLNEVYE 322 Query: 934 RASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGY 993 + + A+K I E K+ V PL + KL Q+ A L ++ +V+ GY Sbjct: 323 QELFVAKKLIKIRDSELKQQVNPLTSQ-------KLAEEQKKAYASAL--NNPLSVITGY 373 Query: 994 AGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMR-SAGVDAQTLASFLHDTQL 1052 G GK+ ++ + ++ + L PT RA + G++A+T+ SFL ++ Sbjct: 374 PGTGKSYLIAYIVETLLKDKHYKKKDIAVLTPTGRASTILAYKTGIEARTIHSFLKLSKP 433 Query: 1053 QQRSGETPDFSN----TLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAP 1108 + F + ++DE SMV M + R + GD DQL I Sbjct: 434 DEDDSFIESFEKENPIKVVVIDEFSMVSLPIMYELLKTCTSIE-RLILVGDRDQLPCIGK 492 Query: 1109 GQPFRLQQTRSAADVAIMKEIVR 1131 G ++KEI R Sbjct: 493 GNLLEDIINSKKLPTFVLKEIHR 515 Score = 75.3 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 60/140 (42%), Gaps = 5/140 (3%) Query: 1309 LQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVS 1368 + + + + + A+ L + + + GDR+ T +D ++ + V ++ Sbjct: 586 INEVNKRLQEWNIKRTGAKK-NLSIHNNLTLFVGDRVIQTVNDYDKNVFNGEIGIVEEIN 644 Query: 1369 GDS---VTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKL 1425 DS + Q +++R + + +++ LAYAIT H QG+ + I Sbjct: 645 TDSKNTFIIVGFGQGKKVRYNRSEILENLSLAYAITVHKFQGSEASCVIFGILKNRVEH- 703 Query: 1426 MAGFESAYVALSRMKQHVQV 1445 M + Y A+SR K+ + + Sbjct: 704 MFTKKFMYTAVSRAKEELLL 723 >UniRef50_B4VXL3 Putative uncharacterized protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VXL3_9CYAN Length = 777 Score = 169 bits (427), Expect = 1e-39, Method: Composition-based stats. Identities = 115/736 (15%), Positives = 216/736 (29%), Gaps = 150/736 (20%) Query: 771 ENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARH 830 W+ G S+ + + Q N + ++ A KL Sbjct: 89 TQAWLLGMGISLGLTLKLTDYYDQRTASVLNTNPY-QIINEIDGIGFKIADSLALKLGMP 147 Query: 831 PSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTE 890 P + EQ + A+ H LP E + A Sbjct: 148 PDSPLRYEQGIIQT----------------LQDARNQGHCFLPSSELIEAA--------- 182 Query: 891 AKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAE----KSILRH 946 + Q+ L V +G + L + Y AE + IL Sbjct: 183 ---LGLLSCPGHTPNPRLLNQVLENALTQKIVVEGRLSESLYLKPIYRAEVNVAQLILYF 239 Query: 947 ILEGKEAVMPLMERVPG-ELMEK-----LTSGQRAATRMILETSDRFTVVQGYAGVGKTT 1000 + + PL E + E +E L QR A + +++ G AG GKT Sbjct: 240 ASRSQLPIEPLKEWLQKLEAVEWRESDLLAPEQRQALLK--SYAQPISIITGGAGRGKTH 297 Query: 1001 QFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA-GVDAQTLASFLHDTQLQQRSGET 1059 + +++ + R +V PT +A M++A G+DAQT+ L Q+ Sbjct: 298 ILKYLINWLTEC----RFKVALAAPTGKAATRMKNATGLDAQTIHRLLQWRGYGQKFEFN 353 Query: 1060 PD--FSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQT 1117 D ++DE SMV + R V GD +QL ++ G R Sbjct: 354 QDNPLPIDWLIIDEFSMVDIFLFNSLLKALEPHT-RIVLVGDHNQLPSVGAGMVLRDLLI 412 Query: 1118 RSAADVAIMKEIVRQTPE--LREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHS 1175 + +K+I RQ E + A +I V Q W Sbjct: 413 SEVVPCSRLKKIYRQPEESPIIYAAEDVIRG----------VVPNLQRFNSPLQW----- 457 Query: 1176 VTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNE 1235 ++++ EA D + L + RD ++Q +++ + Sbjct: 458 ---------QEVSDCALLCRHTPEAIADTIVELVAQMQRDQVNL----KDQVMVLAPQKK 504 Query: 1236 DRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYH 1295 + ++ + + P+ N E+ D ++ + N Y Sbjct: 505 GVVGVQAL-------------NKRLQPLFNPKQPEQPEVETGEVVYRVGDRVIQLKNRYD 551 Query: 1296 RIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERG 1355 I + +G G + P+ + Sbjct: 552 TIPAVMNGEG--------GWVIEVHPKSQPERVKVAFE---------------------- 581 Query: 1356 YVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIA 1415 G + PG + I ++ +T H AQG+ + I Sbjct: 582 ---------------------GGAVVDYVPGIFEQ---IMHSFCLTCHKAQGSEFQYVIM 617 Query: 1416 LEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAIN--NAVQKGTAHDVFEPK 1473 +R M + Y ++R + + A++ +++ T + + Sbjct: 618 PLSPSNHR--MLSRQLLYTTMTRASYGGFIAVGRPETLKFAVSVDKPMRRYTQLPLLLSE 675 Query: 1474 PDREVMNAERLFSTAR 1489 ++ +++A T + Sbjct: 676 SEQTLIDALNQVRTMQ 691 Score = 57.2 bits (136), Expect = 6e-06, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 56/166 (33%), Gaps = 14/166 (8%) Query: 415 RTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQM 474 A+ L ++I++G G G+ + L+ E +V + A ++ Sbjct: 268 LAPEQRQAL--LKSYAQPISIITGGAG-RGKTHILKYLINWLTECRFKVALAAPTGKAAT 324 Query: 475 NMKQDERLSGELITGRRQ---LLEGMAFTPG-----STVIVDQGEKLSLKETLTLLDGAA 526 MK L + I Q + F +I+D+ + + +LL Sbjct: 325 RMKNATGLDAQTIHRLLQWRGYGQKFEFNQDNPLPIDWLIIDEFSMVDIFLFNSLLKALE 384 Query: 527 RHNVQVLITDSGQRTGTGSAL---MAMKDAGVNTYRWQGGEQRPAT 569 H VL+ D Q G+ + + V R + ++P Sbjct: 385 PHTRIVLVGDHNQLPSVGAGMVLRDLLISEVVPCSRLKKIYRQPEE 430 >UniRef50_C7IFQ7 AAA ATPase n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IFQ7_9CLOT Length = 1178 Score = 168 bits (425), Expect = 2e-39, Method: Composition-based stats. Identities = 107/609 (17%), Positives = 204/609 (33%), Gaps = 88/609 (14%) Query: 878 KKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASY 937 KK F+ + E + + EI +K ++ ++ G L +R + Sbjct: 489 KKAKFTQKYIEVE-EDVLDKQLELKRKDKEIYIYLK--EIYKLEDVIGSAVKELAARPNL 545 Query: 938 E-----AEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQG 992 + AEK +I ++E+ K+ + + I + V+ G Sbjct: 546 KLKYPVAEKDWENYIY----KKDSIIEKRDPAKYRKIVDDRIEMCKRIFQKP--ICVITG 599 Query: 993 YAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMR-SAGVDAQTLASFL---- 1047 AG GKTT A+++AV E L PT +A +R + G +A T+ SFL Sbjct: 600 EAGTGKTTIVNAIINAVEK-STGEGTTFQLLAPTGKAAERLRLATGKNAATIHSFLVQRG 658 Query: 1048 --HDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGG-RAVASGDTDQLQ 1104 +D +R G D + ++DE SM+ + + I R + GD +QL Sbjct: 659 WMNDNFTFKREGGVADETKKTIIIDECSMLDTVILGTLFKSINFNCVQRIIFVGDHNQLP 718 Query: 1105 AIAPGQPFRLQQTRSAA----DVAIMKEIVRQTP------ELREAVYSLINRDVERALSG 1154 I G+PF + I+ +R EL + N + E L Sbjct: 719 PIGTGKPFAEIIDYLKKYYPDYIGILTPNIRLIEEGGISLELAQIFTENGNENEEGILQK 778 Query: 1155 LESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVR 1214 L+ + W E + E ++E K GE + ++ + Sbjct: 779 LQYGGEIDKDLKVIFWKNESELKE------KVVSEIISKVRKDGEETEETVRYTFDRLFE 832 Query: 1215 DYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRD-GE 1273 + + + I++ + + G Q+M N N G+ Sbjct: 833 NQKSKFDRNPDNFQIISPYRNE-------------EYGTESVNQLMQQTFNNYNYEKHGK 879 Query: 1274 LRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYT 1333 L ++ ++ + + + S L+ G + P A + Sbjct: 880 LGGVTYFDKIIQYINRPKSYPYYAYNFSSRQVE-RLEVYNGEIGFMVPHAADKLWSKPF- 937 Query: 1334 PDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQH 1393 F S + + + + S + VT ++ Sbjct: 938 -------------FRLSKFQAKFKGKETFGIEFNSDNMVT------------------EN 966 Query: 1394 IDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGW 1453 ++LAYAI+ H AQG+ + + +R + E Y ++R K+H ++ ++ G Sbjct: 967 VELAYAISVHKAQGSDFDNVYFILPKKKSR--LLSKELFYTGITRAKKHTTLFIEDDIGA 1024 Query: 1454 TDAINNAVQ 1462 ++ Sbjct: 1025 LLSLRRKEA 1033 >UniRef50_Q93UY8 TraA-related protein n=3 Tax=Agrobacterium RepID=Q93UY8_RHIRD Length = 1795 Score = 168 bits (425), Expect = 2e-39, Method: Composition-based stats. Identities = 107/649 (16%), Positives = 195/649 (30%), Gaps = 128/649 (19%) Query: 827 LARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVD 886 + P V + R+ L +I+ + + + ++ F Sbjct: 7 IMSDPGMAAVDTSVPARSQA-ELRQSINPLDQS------NIVEWVVNHAANRTAVFGQDQ 59 Query: 887 LLTEAKSFAAEGTG-FTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILR 945 L E+ I L ++ G L S AE++I+R Sbjct: 60 LKISTTRALTRFKRPAQEIDQLFQQVIASDMLTQLESPDG--QPLYTSTELRNAEENIIR 117 Query: 946 HIL---EGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQF 1002 H+ + +P T R A L +R + G AG KT+ Sbjct: 118 HVSNLSAEQSFGVPGTIVDMVADRGIFTPELRGAL-HYLSRPNRAATMVGVAGSAKTSVL 176 Query: 1003 RAVMSAVNMLPE----SERPRVVGLGPTHRAVGEMRSAGVDAQTLASFLHDTQLQQRSGE 1058 A+ AV+ E +E+ ++V PT+RA E+R G L D ++ + Sbjct: 177 GALNEAVDRFNEDTLPAEQIKLVAFVPTNRAAQELRQKG---------LRDVATTFKAKD 227 Query: 1059 TPDFSNTLFLLDESSMVGNTDMARAYALIAAGGG-------RAVASGDTDQLQAIAPGQP 1111 NT+F++DE SMV ++A+ I + + + GD QL + PG Sbjct: 228 RTVGKNTIFVIDEMSMVKTQEIAQLIDKIGSADSYQPTERPKLICVGDDRQLPPVGPGDL 287 Query: 1112 FRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWA 1171 + ++ + + +RQ A L++ K + R + A Sbjct: 288 LPIIMQQAG--CYDLVQPLRQLD----------------AGWRLQTEKLGRDIRNDAQSA 329 Query: 1172 PEHSVTEFSHSQEAKLAEAQQKA--MLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLI 1229 + +T + A + + + D + + Y + L+ Sbjct: 330 VGNYLTALQQMGHVRFVSAGPRGANVRASDQIIDRMLEEMNRVCDQY------PVDDRLV 383 Query: 1230 VTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVL 1289 + H N N +H L +Q+ Sbjct: 384 MAHSNRSVNRANIALHQRFVDKSGLQDQQMS----------------------------- 414 Query: 1290 VDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTK 1349 + +G + + V I + GDR+ F++ Sbjct: 415 -----------------VWSSLIDGGDSEFGIDDGSSRRVQ----QKINLALGDRILFSE 453 Query: 1350 SDRERGYVANSVWTVTAVS---------GDSVTLSDG---QQTREIRPGQEQAEQHIDLA 1397 S + + TV + G + T+ + + Sbjct: 454 SRLQADIRNGTFATVVGLRSAEPSGRDIGTNATVRISARLDGSSRTVTWTDNEFAGFTYG 513 Query: 1398 YAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVY 1446 YA T H +QGA+ AI L + KL YV L+R + + V Sbjct: 514 YAATIHKSQGATVDHAILLCDGALSDKLT------YVGLTRHRSRLDVI 556 >UniRef50_D1R7Z3 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R7Z3_9CHLA Length = 727 Score = 167 bits (422), Expect = 4e-39, Method: Composition-based stats. Identities = 73/423 (17%), Positives = 138/423 (32%), Gaps = 51/423 (12%) Query: 774 WVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSF 833 +++ G S + + +F + ++ N RD+ A+KL Sbjct: 151 FLQAHGVSPTYAQKIFKAYGTHSIAKVKENPF-HLARDIFGIGFKTADLIAQKLGIDSKS 209 Query: 834 TVVSEQ-IKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAK 892 ++ ++ ++ E + + + + A + + + + + Sbjct: 210 SIRTDAGVEFVLSELASDGNVCYPVDLFIEEANKVLEIEQEKISERISVLKEQ------- 262 Query: 893 SFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKE 952 +++ L++ G + + + AE I R I Sbjct: 263 -----------------GRVEHFKLIH----AGEPLQFIWLKPLFVAEVGIAREIQRLLS 301 Query: 953 A--------VMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRA 1004 A V ++ + E L Q+ A L + ++ G G GK+T +A Sbjct: 302 APVVLRDVDVDKALQWIQAEHCIDLAVNQKEAVAQALF--QKMHIITGGPGTGKSTITKA 359 Query: 1005 VMSAVNMLPESERPRVVGLGPTHRAVGEMRS-AGVDAQTLASFLH---DTQLQQRSGETP 1060 ++ L +++ PT RA M G A T+ S L + +R+ +P Sbjct: 360 ILGITEKLTS----KILLAAPTGRAAKRMSEITGKKASTIHSLLEYDFKGKGFKRNRSSP 415 Query: 1061 DFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSA 1120 L ++DESSM+ M I R + GD +QL ++ PG + Sbjct: 416 -LVCDLLIIDESSMIDTFLMYSLLKAI-PDNARVIFVGDINQLPSVGPGNVLQDLIASQV 473 Query: 1121 ADVAIMKEIVRQTP-ELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEF 1179 V + EI RQ INR + + L V QE + V Sbjct: 474 VSVTTLNEIFRQAAGSFIITNAHRINRGMFPDIRNLSQSDFFFVEAQETEDVLKQIVALV 533 Query: 1180 SHS 1182 S Sbjct: 534 SQR 536 Score = 62.6 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 56/388 (14%), Positives = 122/388 (31%), Gaps = 41/388 (10%) Query: 194 IAFGRLYREKLKEQVEALGYET-EVVGKHGMW--EMPGVPVEAF-----------SGRSQ 239 G Y ++ VE G ET +++ + E+PG+ + S R Sbjct: 92 KGIGPKYAARI---VEKFGTETLDMIDRFPNRLSEIPGLGAKRIETIKTCWAEQKSIRDV 148 Query: 240 TI-REAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQR 298 I +A G + + A T + + +A + + D+ A + D + Sbjct: 149 MIFLQAHGVSPTYAQKIFKAYGTHSIAKVKENPFHLARDIFGIGFKTADLIAQKLGIDSK 208 Query: 299 ADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVI-ERA 357 + +RT V + E VL + V+ E+ Sbjct: 209 SSIRTDAGVEFVLSELASDGNVCYPVDLFIEE-----ANKVLEIEQEKISERISVLKEQG 263 Query: 358 RAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMK-----QNRVTVHPEKS 412 R + I + + K LF + + + E+ + +++ + + E Sbjct: 264 RVEHFKLIHAGEPLQFIWLKPLFVAEVGIAREIQRLLSAPVVLRDVDVDKALQWIQAEHC 323 Query: 413 VPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRS 472 + +AV+ + I G G G+ ++ + + ++ + A R+ Sbjct: 324 IDLAVNQKEAVAQALFQK-MHIITGGPG--TGKSTITKAILGITEKLTSKILLAAPTGRA 380 Query: 473 QMNMKQDERLSGELITGRRQL-LEGMAFTPGS-------TVIVDQGEKLSLKETLTLLDG 524 M + I + +G F +I+D+ + +LL Sbjct: 381 AKRMSEITGKKASTIHSLLEYDFKGKGFKRNRSSPLVCDLLIIDESSMIDTFLMYSLL-K 439 Query: 525 AARHNVQVLITDSGQRTGTGSALMAMKD 552 A N +V+ + + ++D Sbjct: 440 AIPDNARVIFVGDINQLPSVGPGNVLQD 467 Score = 57.6 bits (137), Expect = 5e-06, Method: Composition-based stats. Identities = 22/131 (16%), Positives = 50/131 (38%), Gaps = 4/131 (3%) Query: 1334 PDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQH 1393 ++ D++ +++ + + + + + + REI + ++ Sbjct: 582 RQGRKLMVNDKVMQIRNNYSKEVFNGDIGRIVDIDHVEQQVVVKVEEREICYEFSELDE- 640 Query: 1394 IDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGW 1453 I LAYA++ H QG+ + T + L Y A++R K + V ++ Sbjct: 641 IVLAYAVSIHKYQGSECPCVVIPVHTSHFKLLYRNL--LYTAVTRGK-KLVVLVGTKKAL 697 Query: 1454 TDAINNAVQKG 1464 + A+ N K Sbjct: 698 SIAVRNDEIKK 708 >UniRef50_B3EIT2 Helicase, RecD/TraA family n=13 Tax=Bacteria RepID=B3EIT2_CHLL2 Length = 740 Score = 166 bits (421), Expect = 5e-39, Method: Composition-based stats. Identities = 84/461 (18%), Positives = 165/461 (35%), Gaps = 52/461 (11%) Query: 739 SVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMD 798 S E + + GR + S A++ ++++ G ++ + ++ + Q A+ Sbjct: 132 SNPERLLEIEGIGRKRLELITKSWEEQKAIREIMVFLQSHGVGIARAFRIYKTYRQDAIK 191 Query: 799 NATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKS 858 + N + S D+ L A KL I+ AG Sbjct: 192 KVSENPYSLSL-DIDGIGFLTADTIASKLGI-----AHDSLIRAEAG-----------VR 234 Query: 859 ALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLL 918 + + H A+P + + +M+D+ + I ++ G Sbjct: 235 HVLQELASSGHCAVPKERLVQESAAMLDI------------SAPIVEEAIA--VETGKFN 280 Query: 919 YVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAV-------MPLMERVPGELMEKLTS 971 V ++ EK+ + + ++ E +L+ Sbjct: 281 LVRETIDGAEIFYLAPLHRAEEKTAAALAALLRGRTPWKGIDLQKAVVQIAEETGLQLSP 340 Query: 972 GQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVG 1031 Q+ A ++L ++ TV+ G GVGKTT A++ + + +++ PT RA Sbjct: 341 SQKEALALVLT--NKATVITGGPGVGKTTLVNAILRVIRK----KTTKILLCAPTGRAAK 394 Query: 1032 EM-RSAGVDAQTLASFLH---DTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALI 1087 + S G++A+T+ L ++ +RS P + ++DE+SMV M++ + + Sbjct: 395 RLSESTGMEAKTIHRLLEFDPNSGGFKRSSGNP-LEADMVVVDETSMVDIVLMSKLLSAV 453 Query: 1088 AAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAV--YSLIN 1145 A + GD DQL ++ PG A V + EI RQ + V + + N Sbjct: 454 PAKAA-LLLVGDADQLPSVGPGAVLTDIIASDAVPVVRLTEIFRQAARSQIIVNAHRINN 512 Query: 1146 RDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAK 1186 ++ R G E V Q + + A+ Sbjct: 513 GEIPRNAEGEELSDFYVVNSQTPENIHAKLMQMVTERIPAR 553 Score = 69.5 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 63/465 (13%), Positives = 146/465 (31%), Gaps = 68/465 (14%) Query: 299 ADLRTLTPGPASQDGPDVQQAVTQAIAGLSER-KVQFTYTDVLARTVGILPPENGVIERA 357 AD G A + V + L+ ++ + +L ++E Sbjct: 212 ADTIASKLGIAHDSLIRAEAGVRHVLQELASSGHCAVPKERLVQESAAMLDISAPIVEE- 270 Query: 358 RAGIDEAISREQLI--PLDREKGLFTSGIHVLDELSVRALSRDIMKQ----------NRV 405 I + L+ +D + + + +H +E + AL+ + + V Sbjct: 271 --AIAVETGKFNLVRETIDGAEIFYLAPLHRAEEKTAAALAALLRGRTPWKGIDLQKAVV 328 Query: 406 TVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQI 465 + E + + +A++++ ++ ++ I G G G+ V ++ + R++ ++ + Sbjct: 329 QIAEETGLQLSPSQKEALALVLTNKATV-ITGGPG--VGKTTLVNAILRVIRKKTTKILL 385 Query: 466 IAADRRSQMNMKQDERLSGELITGRRQLL-EGMAFTPGS-------TVIVDQGEKLSLKE 517 A R+ + + + + I + F S V+VD+ + + Sbjct: 386 CAPTGRAAKRLSESTGMEAKTIHRLLEFDPNSGGFKRSSGNPLEADMVVVDETSMVDIVL 445 Query: 518 TLTLLDGAARHNVQVLITDSGQ--RTGTGSALMAMKDAGVNTYRWQGGEQRPATIIS--- 572 LL +L+ D+ Q G G+ L + + R A Sbjct: 446 MSKLLSAVPAKAALLLVGDADQLPSVGPGAVLTDIIASDAVPVVRLTEIFRQAARSQIIV 505 Query: 573 --------EPDRNVRYARLAGDFAASVKAGEESVAQVS--------------GVREQAIL 610 E RN L+ + + + E A++ VR+ +L Sbjct: 506 NAHRINNGEIPRNAEGEELSDFYVVNSQTPENIHAKLMQMVTERIPARFGFHPVRDIQVL 565 Query: 611 TQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSR--YLRDMYRPGMVMEQWNPETRSHDR 668 T +G LG + + + + ++ PG + Q Sbjct: 566 TP------MNRGGLGSRALNAELQKALNGSAEPKVSRFGSIFSPGDKVIQMVNN------ 613 Query: 669 YVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVA 713 Y + ++T D + V + +++ +A Sbjct: 614 YDKEVFNGDIGAITAIDTEESELTVDFDKRPVRYEFSELDELALA 658 Score = 57.6 bits (137), Expect = 5e-06, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 47/129 (36%), Gaps = 3/129 (2%) Query: 1339 VGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAY 1398 GD++ ++ ++ + +TA+ + L+ R +R + ++ + LAY Sbjct: 601 FSPGDKVIQMVNNYDKEVFNGDIGAITAIDTEESELTVDFDKRPVRYEFSELDE-LALAY 659 Query: 1399 AITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAIN 1458 A + H +QG + + + Y A++R K+ V + + N Sbjct: 660 ATSIHKSQG--SEYLAVVIPLAMQHFTLLERNLIYTAVTRGKKLVVIIAQPKALALAVTN 717 Query: 1459 NAVQKGTAH 1467 + Sbjct: 718 RKADRRMTT 726 >UniRef50_A8L8Y0 TrwC relaxase n=1 Tax=Frankia sp. EAN1pec RepID=A8L8Y0_FRASN Length = 1549 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 114/673 (16%), Positives = 217/673 (32%), Gaps = 109/673 (16%) Query: 54 RLLEGRLPDGADLSRMQDGSNR---------HRPGYDLTFSAPKSVSMMAMLGGD---KR 101 RL R PD +D R G+D+ + PKS+S++ + G D + Sbjct: 253 RLAAERDPDSGRWRVARDELIRFVEQREPPTVVIGFDVVCAVPKSLSLLWVFGDDELRRD 312 Query: 102 LIDAHNQAVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAV 161 + ++ N AVD +E A+ ++ S L A + HD SR E LH H + Sbjct: 313 IENSMNAAVDAVFTYLERHAAQGMVG---SRNHPGLGLAAASYLHDVSRADEAHLHIHNI 369 Query: 162 VANVTQH---NGEWKTL-----SSDKVGKTGFIENVYANQIAFGRLYREKLKEQV-EALG 212 VAN + + + + E A+ G + L+ ++ G Sbjct: 370 VANAVAIPVLDETGRPERDPVGGARVEWRALDSELFLAHARTAGFVGAAVLRHELARRRG 429 Query: 213 YETEVVGKHGMWEMPGVPVE---AFSGRSQTIREAVGE------DASLKSRDVAALDTRK 263 V ++G+ E+ P E AFS R ++E +G+ + ++ A +R Sbjct: 430 VTWAPV-RNGVAELEDFPTELLAAFSTRHGQVQEELGQLVAQGMLSDGRTEAAAQRRSRA 488 Query: 264 SKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQA 323 +K+ + A + L E G+ RD A +R + P + D ++ + Sbjct: 489 AKKVLADAEVHAVQERRLTEAGWHPSQVRDLARRRDRVPVQ---PTAVDLAELADRLM-G 544 Query: 324 IAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGL---- 379 GL+ + F DV +D+ ++ +++ ++ Sbjct: 545 PQGLTAKAPTFDRRDVYREVAAWACDR-LDAHAISTVVDQLLADPRIVRFEQHSARRRHR 603 Query: 380 ----FTSGIHVLDELSVRALSRDIMKQNRVTVHPE---------------------KSVP 414 F++ + E S+ +L R V Sbjct: 604 GEETFSTEDLLDTEDSLLSLCRQGRVDRGGPPRTLIPPAAVEAALSGDGDGALGGIPGVR 663 Query: 415 RTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQM 474 + D V L D + +V G G +G+ + + + +G V A R Sbjct: 664 LSGEQQDLVRRLLTDDDLVRLVVGPAG-SGKTAAMRTVARVLAARGVTVLGAAHGGRQAE 722 Query: 475 NMKQDERLSGELITGRRQLLEGMA-----FTPGSTVIVDQGEKLSLKETLTLLDGAARHN 529 + + +++G LL+ + + +IVD+ ++S ++ L A R Sbjct: 723 QLAATLEVETRVVSGWLTLLDHTEDPASYWPDDTVLIVDEASQVSTRDAERFLRYATRTG 782 Query: 530 VQVLITDSGQRTG---------------------------------TGSALMAMKDAGVN 556 V++ + G +AL ++ A Sbjct: 783 TVVILVGDPAQLGSVGAGGWFAHLVTETTPPQLTGTHRQRGPGMAEVRAALAGLRSALPA 842 Query: 557 TYRWQGGEQRPATIISEPDRNVRY--ARLAGDFAASVKAGEESVAQVSGVREQAILTQAI 614 + + D ++ + +AG + R+ L A Sbjct: 843 EAMAAVSSLARSGHVRLFDDRAALLSTAVSDWYTERRQAGRATPMMAEHQRDVDALNTAA 902 Query: 615 RSELKTQGVLGLP 627 R L G L P Sbjct: 903 RDALTADGTLTGP 915 Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 106/597 (17%), Positives = 184/597 (30%), Gaps = 120/597 (20%) Query: 875 VESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDV----AKGYGTGL 930 + +K F D+ E ++A + + ++ + ++ + + G Sbjct: 548 LTAKAPTFDRRDVYREVAAWACDRLDAHAISTVVDQLLADPRIVRFEQHSARRRHRGEET 607 Query: 931 LVSRASYEAEKSILRHILEGK-EAVMPLMERVPGELME-----------------KLTSG 972 + + E S+L +G+ + P +P +E +L+ Sbjct: 608 FSTEDLLDTEDSLLSLCRQGRVDRGGPPRTLIPPAAVEAALSGDGDGALGGIPGVRLSGE 667 Query: 973 QRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGE 1032 Q+ R +L D +V G AG GKT R V + + V+G R + Sbjct: 668 QQDLVRRLLTDDDLVRLVVGPAGSGKTAAMRTVARVLA----ARGVTVLGAAHGGRQAEQ 723 Query: 1033 MRSA-GVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGG 1091 + + V+ + ++ +L + +T+ ++DE+S V D R G Sbjct: 724 LAATLEVETRVVSGWLTLLDHTEDPASY-WPDDTVLIVDEASQVSTRDAERFLRYATRTG 782 Query: 1092 GRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERA 1151 + GD QL ++ G F T + + RQ +V A Sbjct: 783 TVVILVGDPAQLGSVGAGGWFAHLVTETTPP--QLTGTHRQRGPGMA--------EVRAA 832 Query: 1152 LSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEA 1211 L+GL S P++ + A V F D L Sbjct: 833 LAGLRSALPAEAMAAVSSLARSGHVRLF-----------------------DDRAALLST 869 Query: 1212 IVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRD 1271 V D+ +A T ++ D LN+ D G L PVL Sbjct: 870 AVSDWYTERRQAGRATPMMAEHQRDVDALNTAARDALTADGTLTG-----PVLTA----- 919 Query: 1272 GELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGN--TRLISPREAVAEGV 1329 D ++ + H + + G G I P + V Sbjct: 920 -----AGREYQTGDEVITLTQAGHTLIPAGRPRGDYIRTGTIGRIVAVRIDPSRPQHQSV 974 Query: 1330 TLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQ 1389 T+ P V G P + Sbjct: 975 TVRFPGKGTVDVG------------------------------------WDYLTHPFPDG 998 Query: 1390 AEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVY 1446 + + AYA+TAH AQG++ + A L + +R + YV LSR +Q +Q Y Sbjct: 999 RDGGLGHAYALTAHKAQGSTMSTARPLIVDDTSRPGL------YVMLSRAQQRLQAY 1049 >UniRef50_C5B6U1 Conjugal transfer protein TraA n=1 Tax=Methylobacterium extorquens AM1 RepID=C5B6U1_METEA Length = 964 Score = 163 bits (412), Expect = 7e-38, Method: Composition-based stats. Identities = 97/460 (21%), Positives = 155/460 (33%), Gaps = 29/460 (6%) Query: 805 LARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPA 864 LA G DVR+ + + LA P + + A + E A H+ A Sbjct: 180 LAELGHDVRI---DHRSLADQGLALEPQHKIGPAGARREARDEDAERADEHRAIAARNGD 236 Query: 865 QQAIH--LALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDV 922 + A +AL + + F+ DL + FT L ++ A +L+ + Sbjct: 237 RIAADPTIALTALTQQSSTFTRQDLARLIHRHSDGEAQFTPLMAKVEA---SPELVRLGQ 293 Query: 923 AKGYGTGLLVSRASYEAEKSILR---HILEGKEAVMPLMERVPGELMEKLTSGQRAATRM 979 G +R E + + + + + + L + Q AA R Sbjct: 294 DAR-GQERFTTRMMLGIEARMEQAAERLSRAEGHAIGSSLQEAALRARSLGAEQDAAFRS 352 Query: 980 ILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMR-SAGV 1038 + +D +V GYAG GK+T A + E+ V G + A + +G+ Sbjct: 353 VTGGAD-LALVTGYAGTGKSTMLAA----ARVAWEAAGYTVRGAALSGIAAENLEAGSGI 407 Query: 1039 DAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASG 1098 ++TLAS H G S + ++DE+ MVG+ M R + G + V G Sbjct: 408 LSRTLASLEHA----WGQGRDALTSRDVLVIDEAGMVGSRQMERVLSAAQTAGAKIVLVG 463 Query: 1099 DTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVY-SLINRDVERALSGLES 1157 D +QLQAI G FR R A A + ++ RQ + A L AL+ + Sbjct: 464 DPEQLQAIEAGAAFRALLERHGA--AEITQVRRQEEAWQRAATRELATGRTGEALARYVA 521 Query: 1158 VKPSQVP--RQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRD 1215 Q R E A + + K + + A Sbjct: 522 AGRVQAQATRLEAQAALVAAWDAERQAAPEKSRMILASTRVDVAELNRLARARMRAAGAL 581 Query: 1216 YTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELG 1255 E T DR + + K G LG Sbjct: 582 GVEAPVETERGTRAFAPG--DRLMFLRNERSLGVKNGSLG 619 Score = 96.8 bits (239), Expect = 6e-18, Method: Composition-based stats. Identities = 96/643 (14%), Positives = 198/643 (30%), Gaps = 79/643 (12%) Query: 244 AVGEDASLKSRDVAALDTRKSKQHVD-----PEIKMAEWMQTLKETGFDIRAYRDAADQR 298 A E + R ++TR ++ D + + A R+A D+ Sbjct: 161 AREELVGWRERWAGHVNTRLAELGHDVRIDHRSLADQGLALEPQHKIGPAGARREARDED 220 Query: 299 ADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERAR 358 A+ A+++G + T A+ L+++ FT D LAR + Sbjct: 221 AERADEHRAIAARNGDRIAADPTIALTALTQQSSTFTRQD-LARLIHRHSDGEAQFTPLM 279 Query: 359 AGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPE------KS 412 A ++ + +L R + FT+ + + E + + + + + ++ Sbjct: 280 AKVEASPELVRLGQDARGQERFTTRMMLGIEARMEQAAERLSRAEGHAIGSSLQEAALRA 339 Query: 413 VPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRS 472 A A + LA+V+G G G+ +A + G V+ A + Sbjct: 340 RSLGAEQDAAFRSVTGGAD-LALVTGYAG-TGKSTMLAAARVAWEAAGYTVRGAALSGIA 397 Query: 473 QMNMKQDERLSGELITGRRQL--LEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNV 530 N++ + + A T +++D+ + ++ +L A Sbjct: 398 AENLEAGSGILSRTLASLEHAWGQGRDALTSRDVLVIDEAGMVGSRQMERVLSAAQTAGA 457 Query: 531 QVLITDSG---QRTGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDF 587 ++++ Q G+A A+ + Q Q A Sbjct: 458 KIVLVGDPEQLQAIEAGAAFRALLERHGAAEITQVRRQEEAW------------------ 499 Query: 588 AASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLR 647 + +++ R L + + G + + A + + + Sbjct: 500 ------QRAATRELATGRTGEALARYV-----AAGRVQAQATRLEAQAALVAAWDAERQA 548 Query: 648 DMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRP 707 + M++ + R + + + + + +++ Sbjct: 549 APEKSRMIL--------ASTRVDVAELNRLARA--------RMRAAGALGVEAPVET-ER 591 Query: 708 EKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTA 767 A G+RL L V G V V M+V + G P + Sbjct: 592 GTRAFAPGDRLMFLRNERSLGVKNGSLGWVERVESGGMSVRLDG---PEGRVIGFELKDY 648 Query: 768 LKLENGWVET--PGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAE 825 +E+G+ T V+ + M +A GL R V L+ D+ + Sbjct: 649 AHVEHGYAATVHKAQGVTVDRIHLLASPLMDRHSA-YVGLTRHREAVTLHYGQDDFGDIQ 707 Query: 826 KLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAI 868 LAR S + RA ET+L+ A + PA + Sbjct: 708 ALARGAS--------RERAQETTLDYAAGFAERRGIVPASTIV 742 Score = 86.4 bits (212), Expect = 9e-15, Method: Composition-based stats. Identities = 42/191 (21%), Positives = 69/191 (36%), Gaps = 15/191 (7%) Query: 1333 TPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQ 1392 T GDR+ F +++R G S+ V V +++ + + + Sbjct: 590 ERGTRAFAPGDRLMFLRNERSLGVKNGSLGWVERVESGGMSVRLDGPEGRVIGFELKDYA 649 Query: 1393 HIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYT----- 1447 H++ YA T H AQG + L +R SAYV L+R ++ V ++ Sbjct: 650 HVEHGYAATVHKAQGVTVDRIHLLASPLMDRH------SAYVGLTRHREAVTLHYGQDDF 703 Query: 1448 DNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARE----LRDVAAGRAVLRQ 1503 + Q + + T D +R + R LR + R Sbjct: 704 GDIQALARGASRERAQETTLDYAAGFAERRGIVPASTIVVERPAEPELRPEPPAPRLGRF 763 Query: 1504 AGLAGGDSPAR 1514 AGL G +PAR Sbjct: 764 AGLKLGRAPAR 774 >UniRef50_A6WWM4 Ti-type conjugative transfer relaxase TraA n=2 Tax=Rhizobiales RepID=A6WWM4_OCHA4 Length = 1534 Score = 163 bits (411), Expect = 8e-38, Method: Composition-based stats. Identities = 90/544 (16%), Positives = 181/544 (33%), Gaps = 66/544 (12%) Query: 805 LARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPA 864 LA +G D+RL + + +A+ + + + ++ Sbjct: 212 LALAGHDIRLDGRSYAEQGLDGIAQKHLGPEKAALARKNMEMYFAPADLVRRQEMADRLL 271 Query: 865 QQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEI----NAQIKRGDLLYV 920 + L + + F+ D+ + + F + + N + R + Sbjct: 272 LEPELLLKQLERER-STFNERDIARALHRYVDDPADFVSIRTRVMVSNNLVLLRPQQVDR 330 Query: 921 DVAKGYGTGLLVSRASYEAEKSIL------------RHILEGKEAVMPLMERVPGELMEK 968 K + S+ E ++ R + + + + +E E + Sbjct: 331 QTGKVAQPAVFTSQEILRTEFDMVGSAEVLSKRTGFRITDKQRASAVGAIETADPEKPFR 390 Query: 969 LTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHR 1028 L Q A + + G AG GK+T ++SA + ES RV+G + Sbjct: 391 LEQEQIDAVHHV-TGDSAIATIVGLAGAGKST----LLSAARIAWESGHHRVLGAALAGK 445 Query: 1029 AVGEMRSA-GVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALI 1087 A + + G+ ++TLA++ +L + + +++E+ MV + MAR Sbjct: 446 AAEGLEESSGIKSRTLAAW----ELAWANERDLLKRGDVLVIEEAGMVPSQQMARVLEAA 501 Query: 1088 AAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPEL-REAVYSLINR 1146 G + V GD QLQ I G FR R + A + + RQ R+A + Sbjct: 502 KDAGAKVVLVGDAMQLQPIQAGAAFRAIAERIGS--AELAGVRRQREGWARDASHLFARG 559 Query: 1147 DVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPM 1206 +VE+ L + L EA+ + G D Sbjct: 560 EVEKGLDAY--------------------------VKHGHLVEARTHDEIIGRLVSDWAD 593 Query: 1207 TLYEAIVRDYTGRTPEAR-EQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLN 1265 + + + + ++ L++ H N+D R LN+ + + +K L + Sbjct: 594 ARRSFLQQSKGEESAFSYCDKLLVLAHTNKDVRRLNAALREEMKKESALTVPREFRTERG 653 Query: 1266 TANIRDGEL-------RRLSTWETHRDALVLVDNVYHRIAGIS--KDDGLITLQDAEGNT 1316 G+ R + T + + + + DD L++++ G Sbjct: 654 MREFAVGDRIIFLENSRFVEKRATGLGPQYVKNGLLGTVVSTGGRHDDPLLSVRLDNGRD 713 Query: 1317 RLIS 1320 +IS Sbjct: 714 VIIS 717 Score = 76.8 bits (187), Expect = 7e-12, Method: Composition-based stats. Identities = 92/630 (14%), Positives = 182/630 (28%), Gaps = 95/630 (15%) Query: 243 EAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADL- 301 G+ ++K +A +T + + E G D A + ++A L Sbjct: 189 RWAGDKETMKEWKIAWAETTNRHLALAGHDIRLDGRSYA-EQGLDGIAQKHLGPEKAALA 247 Query: 302 -RTLTPGPASQDGPDVQQAVTQAIAGLSE-------RKVQFTYTDV---LARTVGILPPE 350 + + A D Q+ + + + F D+ L R V Sbjct: 248 RKNMEMYFAPADLVRRQEMADRLLLEPELLLKQLERERSTFNERDIARALHRYVDDPADF 307 Query: 351 NGVIERARAGIDEAISREQLIPLDREK----GLFTSGIHVLDELSVRALSRDIMKQ---- 402 + R + + R Q + K +FTS + E + + + K+ Sbjct: 308 VSIRTRVMVSNNLVLLRPQQVDRQTGKVAQPAVFTSQEILRTEFDMVGSAEVLSKRTGFR 367 Query: 403 -----------NRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAE 451 T PEK DAV + D IV G G AG+ ++ Sbjct: 368 ITDKQRASAVGAIETADPEKPFRLEQEQIDAVHHVTGDSAIATIV-GLAG-AGKSTLLSA 425 Query: 452 LVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITG--RRQLLEGMAFTPGSTVIVDQ 509 + V A ++ +++ + + E G +++++ Sbjct: 426 ARIAWESGHHRVLGAALAGKAAEGLEESSGIKSRTLAAWELAWANERDLLKRGDVLVIEE 485 Query: 510 GEKLSLKETLTLLDGAARHNVQVLITDSG---QRTGTGSALMAMKDAGVNTYRWQGGEQR 566 + ++ +L+ A +V++ Q G+A A+ + Sbjct: 486 AGMVPSQQMARVLEAAKDAGAKVVLVGDAMQLQPIQAGAAFRAIAE-----------RIG 534 Query: 567 PATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGL 626 A + + +AR A A + + A V T Sbjct: 535 SAELAGVRRQREGWARDASHLFARGEVEKGLDAYVKHGHLVEARTH-------------- 580 Query: 627 PEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDA 686 + + L W D+R + ++Q E + V A ++ R Sbjct: 581 -DEIIGRLVSDWADARRSF----------LQQSKGEESAFSYCDKLLVLAHTNKDVRRLN 629 Query: 687 QGETQVVRISSLDSSWSLFRPE--KMPVADGERLRVTGKIP----------GLRVSGGDR 734 + ++ S + FR E A G+R+ V G Sbjct: 630 AALREEMKKESALTVPREFRTERGMREFAVGDRIIFLENSRFVEKRATGLGPQYVKNGLL 689 Query: 735 LQVASV---SEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSA-TVFA 790 V S +D + V + S + ++ G+ T + + F Sbjct: 690 GTVVSTGGRHDDPLLSVRLDNGRDVII----SEDSYRNIDYGYAATIHKAQGTTVERTFV 745 Query: 791 SVTQMAMDNATLNGLARSGRDVRLYSSLDE 820 T M + T + R LY++ ++ Sbjct: 746 LATGMMDQHLTYVAMTRHRDRTDLYAARED 775 >UniRef50_A5CCM9 Helicase RecD/TraA, ATP-dependent exoDNAse (Exonuclease V) n=2 Tax=Orientia tsutsugamushi RepID=A5CCM9_ORITB Length = 731 Score = 161 bits (408), Expect = 2e-37, Method: Composition-based stats. Identities = 53/199 (26%), Positives = 84/199 (42%), Gaps = 13/199 (6%) Query: 942 SILRHILEGKEAVMPLMERVPGELME----KLTSGQRAATRMILETSDRFTVVQGYAGVG 997 +L HI +GK A P+ E + KL+ Q+ A L++ + ++ G GVG Sbjct: 303 ELLVHISKGKLAWNPISSNKITEYISNANIKLSPSQQDALNQALKS--KVMIITGGPGVG 360 Query: 998 KTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA-GVDAQTLASFLHDTQLQQRS 1056 KTT ++++ + SE ++ PT RA + A A T+ ++ Q Sbjct: 361 KTTLINSIINILK----SEGVVILLAAPTGRAAKRLSEATQHPAHTIHRLVYSRPGQD-V 415 Query: 1057 GETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQ 1116 L +LDE SMV T M A + + + GD DQL ++ PGQ F Sbjct: 416 RTITKLKCQLLILDEMSMVDVTTMYAAISALPSTAA-LFLVGDIDQLPSVGPGQVFSDLI 474 Query: 1117 TRSAADVAIMKEIVRQTPE 1135 + + EI RQ + Sbjct: 475 KSQKFPIVTLTEIFRQNNQ 493 Score = 62.6 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 48/125 (38%), Gaps = 4/125 (3%) Query: 1339 VGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAY 1398 GD++ ++ ++ + + + ++ + +I ++ ++ I LAY Sbjct: 597 FKIGDKVMQVVNNYDKDIYNGDIGIINTIDHENQNIVINFDGNKISYDFDEIDE-IVLAY 655 Query: 1399 AITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAIN 1458 AIT H +QG I M + Y A++R K + + ++ AI Sbjct: 656 AITIHKSQGGEYHTVIIPL--MMQHYPMLQRKLIYTAITRAK-KLVIVVGQKKALNIAIK 712 Query: 1459 NAVQK 1463 + + Sbjct: 713 KNIAE 717 Score = 57.2 bits (136), Expect = 6e-06, Method: Composition-based stats. Identities = 29/206 (14%), Positives = 73/206 (35%), Gaps = 15/206 (7%) Query: 351 NGVIERARAGIDEA------ISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNR 404 + +I+ I+E I+ E+ I L +L +S L+ + + N+ Sbjct: 263 SIIIDALSFEINERNVAVENINGEECIFLKGLAYAELKIAELLVHISKGKLAWNPISSNK 322 Query: 405 VTVHPEKS-VPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREV 463 +T + + + + DA++ + + + I++G G G+ + ++ + + +G + Sbjct: 323 ITEYISNANIKLSPSQQDALNQALKSK--VMIITG-GPGVGKTTLINSIINILKSEGVVI 379 Query: 464 QIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFT-----PGSTVIVDQGEKLSLKET 518 + A R+ + + + I G +I+D+ + + Sbjct: 380 LLAAPTGRAAKRLSEATQHPAHTIHRLVYSRPGQDVRTITKLKCQLLILDEMSMVDVTTM 439 Query: 519 LTLLDGAARHNVQVLITDSGQRTGTG 544 + L+ D Q G Sbjct: 440 YAAISALPSTAALFLVGDIDQLPSVG 465 >UniRef50_Q3B2W0 Helicase RecD/TraA n=19 Tax=Bacteria RepID=Q3B2W0_PELLD Length = 739 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 87/380 (22%), Positives = 140/380 (36%), Gaps = 40/380 (10%) Query: 864 AQQAIHLALPVVESK-KLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDV 922 A+ + L + SK LL A+ + L + + G ++ Sbjct: 232 ARAGMSWVLQELSSKGHCRVPEPMLLDAARQLL--QIPDSVLEEALQVECAAGRIV---A 286 Query: 923 AKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPL----MERVPGELMEK----LTSGQR 974 ++AE+ ++ I +P +ER E E+ L+ QR Sbjct: 287 VLEGEERYCYLEYLWKAEQGVVEGIRRIAGGKLPWGRLDVERSVTEAEERSRLELSVSQR 346 Query: 975 AATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMR 1034 A R+ L ++ ++ G GVGKTT R ++S +PE +V+ PT RA + Sbjct: 347 EAVRLALS--NKLLIITGGPGVGKTTIIRTLLS----IPEVFGLKVLLTAPTGRAAKRLS 400 Query: 1035 SA-GVDAQTLASFLH---DTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAG 1090 A G + +T+ L T +RS P L ++DE+SM+ M R I Sbjct: 401 EATGREGRTIHRLLEFDPATFDFKRSAHNP-LEADLVIVDEASMIDVVLMNRLLPAIPK- 458 Query: 1091 GGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVER 1150 + +GD DQL + PG + V + EI RQ A SLI ++ R Sbjct: 459 NAALILAGDVDQLPPVGPGAVLSDLISSGTVRVVRLTEIFRQ------AATSLIIQNAHR 512 Query: 1151 ALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYE 1210 G + R EG + E S S + + Q A E F P+ + Sbjct: 513 VNRG------EGLLRHEGPGLGDFYFVESSSSDDIRRKLVQIVAERIPERFGLDPLDDIQ 566 Query: 1211 AIVRDYTGRTPEAREQTLIV 1230 + R P E ++ Sbjct: 567 VLTP--MNRGPLGAESLNVL 584 Score = 69.5 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 52/309 (16%), Positives = 96/309 (31%), Gaps = 29/309 (9%) Query: 297 QRADLRTLTPGPASQDGPDVQQAVTQAIAGLSER-KVQFTYTDVLARTVGILPPENGVIE 355 + AD + G A+ + ++ + LS + + +L +L + V+E Sbjct: 213 RTADAIAQSIGIAADSPLRARAGMSWVLQELSSKGHCRVPEPMLLDAARQLLQIPDSVLE 272 Query: 356 RARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDI-----------MKQNR 404 A E + + L+ E+ E V R I ++++ Sbjct: 273 EALQV--ECAAGRIVAVLEGEERYCYLEYLWKAEQGVVEGIRRIAGGKLPWGRLDVERSV 330 Query: 405 VTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQ 464 + + +AV LA L I G G G+ + L+ + G +V Sbjct: 331 TEAEERSRLELSVSQREAVR-LALSNKLLIITGGPG--VGKTTIIRTLLSIPEVFGLKVL 387 Query: 465 IIAADRRSQMNMKQDERLSGELITGRRQLL-EGMAFTPGS-------TVIVDQGEKLSLK 516 + A R+ + + G I + F + VIVD+ + + Sbjct: 388 LTAPTGRAAKRLSEATGREGRTIHRLLEFDPATFDFKRSAHNPLEADLVIVDEASMIDVV 447 Query: 517 ETLTLLDGAARHNVQVLI---TDSGQRTGTGSALMAMKDAGVNTYRWQGGEQRPATIISE 573 LL A N +++ D G G+ L + +G R A Sbjct: 448 LMNRLLP-AIPKNAALILAGDVDQLPPVGPGAVLSDLISSGTVRVVRLTEIFRQAATSLI 506 Query: 574 PDRNVRYAR 582 R R Sbjct: 507 IQNAHRVNR 515 Score = 52.9 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 50/125 (40%), Gaps = 10/125 (8%) Query: 1342 GDRMRFTKSDRERGYVANSVWTVTAVS---GDSVTLSDGQQTREIRPGQEQAEQHIDLAY 1398 GD++ T ++ E+ + ++A+ G+ L DG++ R ++ A+ Sbjct: 607 GDKVIQTVNNYEKEVFNGDIGIISAIDHEEGELQVLFDGREVRYQTGELDEMAP----AW 662 Query: 1399 AITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAIN 1458 AIT H +QG + + M Y AL+R ++ V V + + A+ Sbjct: 663 AITIHKSQG--SEYPAVVIPLSMLHYPMLERNLIYTALTRGRKLVMVIGEEK-ALRLAVG 719 Query: 1459 NAVQK 1463 K Sbjct: 720 KCSSK 724 >UniRef50_A5FUA1 ATP-dependent exoDNAse (Exonuclease V) alpha subunit-helicase superfamily I member-like protein n=3 Tax=Acidiphilium cryptum JF-5 RepID=A5FUA1_ACICJ Length = 1699 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 156/943 (16%), Positives = 298/943 (31%), Gaps = 172/943 (18%) Query: 68 RMQDGSNRHRPGY-DLTFSAPKSVSMMAMLGGDK----RLIDAHNQAVDFAVRQVEALAS 122 R ++ GY D TFSA K++S+ + +L AH AV + ++E + Sbjct: 707 RNAVNRSKTPIGYVDFTFSADKTISLAWAFAPTEAERNQLAQAHKDAVAATMAEIEQVIG 766 Query: 123 TRVMTDGQSETVLTGNLVMALFNHDTSR-----------------------DQEPQLHTH 159 G E G + F+H T+R +PQLHTH Sbjct: 767 QARKGKGGKEATEQGRIGWITFDHYTARPTLEIARETADGRTETEIVSVKVAGDPQLHTH 826 Query: 160 AVVANV-TQHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVV 218 V NV +G +L++ ++ +G +Y+ L + + G E+ Sbjct: 827 VAVPNVIVTESGRVVSLNTLQMHGRI---------HEWGAIYQAHLAQNLRRAGASIELD 877 Query: 219 GKHGMWEMPGVPVE---AFSGRSQTIREAVGEDASLKSRDV--------------AALDT 261 G + VP E AFS R++ A+ + A + Sbjct: 878 RTTGAARLSAVPEEIRAAFSKRTRDALSDAKAYAASVGAEWDRMTGDERIKLLKGGAFAS 937 Query: 262 RKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVT 321 R +K D A W + +E G+ ++ A +L + +A Sbjct: 938 RSAK--ADDMSDFASWRRQAEERGYQHKSVLQDAAPAENL------TEAARLDRAYEAAA 989 Query: 322 QAIAGLSERKVQFTYTDVLARTVG-----------------ILPPENGVIERARAGIDEA 364 + + R+ D GV+E AG + Sbjct: 990 RVLGEQFARRAVIKDEDERVAAARGLVAAGIKDGGDVDRVIARLRARGVVETGGAGGNGE 1049 Query: 365 ISREQLIPLDR------------EKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKS 412 +R Q+I ++ T+ HV E ++ L+ + R T++P + Sbjct: 1050 PARTQIIAVETVRDDPDNPDVKITTTRLTTRAHVEQESALVELAAQAGQDRRGTLNPAQV 1109 Query: 413 VPRTA--GYSDAVSVLAQDRPSLAIVSGQG--------GAAGQRERVAELVMMAREQGRE 462 A G S R + + G AG+ + LV R+QG + Sbjct: 1110 KRGIAASGLSFTGEHGVAQRRMIDHLGMSGRFAVGIGAAGAGKTTLLKPLVAAWRDQGAD 1169 Query: 463 VQIIAADRRSQMNMK------QDERLSGELITGRRQLLE-----GMAFTPGSTVIVDQGE 511 + I+ R ++ + E + I + + + S V++D+ Sbjct: 1170 IHGISLGWRQARELREAGLNTEAETGGRDTIAAVSVFINRVESGRLDLSNRSVVVIDELG 1229 Query: 512 KLSLKETLTLLDGAARHNVQ-VLITDSGQRTG--TGSALMAMKDAGVNTYRWQGGEQRPA 568 + ++ L LL RH + V I D Q G + ++ Sbjct: 1230 TIGTRQMLDLLRLQERHGFRMVAIGDPKQCQSIEAGQVIGLLEKG-------------LG 1276 Query: 569 TIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPE 628 + S + A + A ++ G + ++ T I V G P Sbjct: 1277 EVPSIESSVRQTNERAREIAGLLRKGGAEAVGKALDMKRQDGTAEI--------VAGGPS 1328 Query: 629 VTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQG 688 + + +W R + RP + + T R + + + + A G Sbjct: 1329 EVIARAAALW---DERRKANADRPRFTLS-ISTPTNQDARAIGEAIRQR------LLASG 1378 Query: 689 ETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRV--------SGGDRLQVASV 740 E R++ + MP+A E++R+ + + G L++ S+ Sbjct: 1379 ELGQSRMTLAAVDKNTGEHYAMPIATREKIRLFARTNAAMLDGGKGAIGDNGSILEITSI 1438 Query: 741 SEDAMTVVVPGRAEPATL--PVSDSPFTALKLENGWVETPG--HSVSDSATVFAS--VTQ 794 ++ + + E ++D ++L G+ T ++ + +F + +Q Sbjct: 1439 RDEGLVLRNDHGREGFVKWDTLADKETGRMRLAYGYAMTTNTAQGITTTEHIFVTPGGSQ 1498 Query: 795 MAMDNATLNGLARSGRDVRLYSSLDETRTA----------EKLARHPSFTVVSEQIKTRA 844 T +R +S R + H +T + I + Sbjct: 1499 TTDGFKTYVSGSRHRERDYWLTSEGAERQEIAGRRPLGDPRPIREHDIWTNWTRNIARQP 1558 Query: 845 GETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDL 887 +T+ + + A A +A L E ++ A DL Sbjct: 1559 EKTNALDLVKIGEEA-RRNAARAFLKGLAADEKREAAGLPSDL 1600 Score = 127 bits (318), Expect = 5e-27, Method: Composition-based stats. Identities = 134/725 (18%), Positives = 216/725 (29%), Gaps = 159/725 (21%) Query: 816 SSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVV 875 S L + AE L E GE A+ + A+ + + Sbjct: 964 SVLQDAAPAENLTEAARLDRAYEAAARVLGEQFARRAVIKDEDERVAAARGLVAAGIKDG 1023 Query: 876 ESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRA 935 + + ++ A G G I + R D DV T L +RA Sbjct: 1024 GDVDRVIARLRARGVVETGGAGGNGEPARTQIIAVETVRDDPDNPDVKI--TTTRLTTRA 1081 Query: 936 SYEAEKSILRHILEG----KEAVMPL-MERVPGELMEKLTSG----QRAATRMILETSDR 986 E E +++ + + + P ++R T QR L S R Sbjct: 1082 HVEQESALVELAAQAGQDRRGTLNPAQVKRGIAASGLSFTGEHGVAQRRMIDH-LGMSGR 1140 Query: 987 FTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVDA------ 1040 F V G AG GKTT + +++A + + G+ R E+R AG++ Sbjct: 1141 FAVGIGAAGAGKTTLLKPLVAAWR----DQGADIHGISLGWRQARELREAGLNTEAETGG 1196 Query: 1041 -QTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGD 1099 T+A+ + + SG + ++ ++DE +G M L G R VA GD Sbjct: 1197 RDTIAA-VSVFINRVESGRLDLSNRSVVVIDELGTIGTRQMLDLLRLQERHGFRMVAIGD 1255 Query: 1100 TDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPE-LREAVYSLINRDVERALSGLESV 1158 Q Q+I GQ L + +V ++ VRQT E RE L E L+ Sbjct: 1256 PKQCQSIEAGQVIGLL-EKGLGEVPSIESSVRQTNERAREIAGLLRKGGAEAVGKALDMK 1314 Query: 1159 KPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTG 1218 + E + E + A A Sbjct: 1315 RQDGTAEIVAGGPSEVIARAAALWDERRKANA---------------------------- 1346 Query: 1219 RTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELG-------------KEQVMVPVLN 1265 R I T N+D R + I +GELG E +P+ Sbjct: 1347 --DRPRFTLSISTPTNQDARAIGEAIRQRLLASGELGQSRMTLAAVDKNTGEHYAMPIAT 1404 Query: 1266 TANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAV 1325 IR + + + A+ ++ S D + L++ G + Sbjct: 1405 REKIRLFARTNAAMLDGGKGAIGDNGSILEI---TSIRDEGLVLRNDHGREGFVKWD--- 1458 Query: 1326 AEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRP 1385 T +D+E G + Sbjct: 1459 ----------------------TLADKETGRM---------------------------- 1468 Query: 1386 GQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQV 1445 + YA+T + AQG + T I + T G + GF++ YV+ SR ++ Sbjct: 1469 -------RLAYGYAMTTNTAQGITTTEHIFV--TPGGSQTTDGFKT-YVSGSRHRERDYW 1518 Query: 1446 YT----------------DNRQ--------GWTDAINNAVQKGTAHDVFEPKPDREVMNA 1481 T D R WT I +K A D+ + + A Sbjct: 1519 LTSEGAERQEIAGRRPLGDPRPIREHDIWTNWTRNIARQPEKTNALDLVKIGEEARRNAA 1578 Query: 1482 ERLFS 1486 Sbjct: 1579 RAFLK 1583 >UniRef50_B9NXA5 Putative MobA/MobL protein n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NXA5_9RHOB Length = 3238 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 169/1162 (14%), Positives = 350/1162 (30%), Gaps = 180/1162 (15%) Query: 278 MQTLKETGFDIRA------YRDAADQRADL---RTLTPGPASQDGPDVQQAVTQAIAGLS 328 +TL+E G +++ + A+Q DL + + ++ + +S Sbjct: 211 HRTLEEQGIELKPDTYNPHVAEHAEQSGDLAREKDRITQVRRDNAAYLRAHPEHVLTVVS 270 Query: 329 ERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLD-----REKGLF--- 380 + F+ D+ L +N + + +D A++ +L+ LD R + Sbjct: 271 AKATIFSEQDIKNEFKRRL--DNAAPDEIMSLVDAAMASRELVQLDCTIEDRAGEKWPGL 328 Query: 381 TSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQ---DRPSLAIVS 437 T+ E ++ ++ + +Q+ ++ + G + A L++V+ Sbjct: 329 TTRARAYRERNLVLDAKVLARQSLNVDGSDRLDLLSEGLRETQRNAALEMVSPDRLSLVT 388 Query: 438 GQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITG--RRQLLE 495 G GG G+ + + + + +G EV A ++ + + + R Sbjct: 389 GYGG-VGKTYTIGQAAKVWKARGYEVLGGAISGKATQELSTIPEMEIASLAAWESRWARG 447 Query: 496 GMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMKDAGV 555 + +D+ + + +L + ++++ +G G L + D+ + Sbjct: 448 ALPVQGKFVFFLDEIGMVGGDTLVRVLKRVSDMGGKLIV------SGDGEQLQPVMDSSI 501 Query: 556 NTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIR 615 + E P + + RY R A A G L R Sbjct: 502 VDALLEVKE--PVLMDQIVRQKNRYQREASRQLAQ-----------GGKHIDHALDYYSR 548 Query: 616 SELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVID--- 672 L E T AL + D+ G E+ + D + + Sbjct: 549 EGHIH--FLENNEETFAALVQRYFDTP---------VGHSSERIAGAVSNRDVWALQDLL 597 Query: 673 RVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGG 732 R A + + Q +++RI + + V +GERL T L + Sbjct: 598 RAEAINRGVLGEREQELGEIIRIDHRGLR-DVRLKLPLLVREGERLIFTASHRELGIPKS 656 Query: 733 DRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASV 792 V ++ A+ +++ P + + F + +S + Sbjct: 657 SMGTVVAMPYKALDILLDDTDTPVRVHLE--AFNSFDYAYAATIHKMQGMSKERIHILAH 714 Query: 793 TQMAMDNATLNGLARSGRDVRLY------------------------------------- 815 +M + R V LY Sbjct: 715 PRMNRYLGN-VAMTRHEEGVDLYVSETRIETLEDLKDLFGTKSHLWIDGSETPDELRRAG 773 Query: 816 SSLDETRTA-EKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPA---------- 864 + L E+ A ++L P+ V + ++ R + I+ + L + Sbjct: 774 TGLAESGLAKDRLDLIPASETVQKLVRERFIGDPHLSGIASRVGGLLSAEFVDGDPILEE 833 Query: 865 -----QQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLY 919 Q + + ++ F D+ + F L + ++ DL+ Sbjct: 834 DPQGYAQDPWRVIDEMMERQAVFRATDVADALSQITKDPETFLRLFKQ---AMEHPDLVI 890 Query: 920 VDVAKGYGTGL-LVSRASYEAEKSILRH----------ILEGKEAVMPLMERVPGELMEK 968 +D G G +R E +L G + + + G E Sbjct: 891 LDEGGRNGEGRIYSTRTQVAQEMDVLDRGVRLSLLEHLPHAGTDRSKAFGQSLHGIGEEA 950 Query: 969 L----------TSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERP 1018 L T Q AA R ++ ++V G +G GKT A+ E Sbjct: 951 LLSAEIQTSDLTPEQEAAFRAAIDQP-GLSLVSGPSGSGKTRVAGALARVYRAAGVKE-- 1007 Query: 1019 RVVGLGPTHRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNT 1078 V + PT V +R G D A + + + G ++ +LD++ +VG Sbjct: 1008 -VNAIAPTSAGVDRLRRTGEDG---AMSIRQFEERVADGRIALMPRSVIVLDDAGLVGAE 1063 Query: 1079 DMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELRE 1138 R L G + VA DT Q A+ FR+ + R + + +RQ R+ Sbjct: 1064 TADRLIGLAETHGSKIVALRDTHQFAALEASPIFRMLEDRVGG--HRLGDSLRQVDPARK 1121 Query: 1139 AVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKG 1198 + L +G E + + E + AM + Sbjct: 1122 -----------QMLEEFRQAPTGVPGDPQGEGPAERGLATLMTEGVFQAGETRDLAMNR- 1169 Query: 1199 EAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQ 1258 + ++Y ++ L+V D LN +I + + + Sbjct: 1170 -------------VAQNYVRDAVASK---LVVAQTRSDVNELNRLIREKMDAR--YPERT 1211 Query: 1259 VMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRL 1318 + T + D ++L + + ++ D G L Sbjct: 1212 IKASPFGTTDKLAEAPVGSIAALRPGDRILLSGGYFGANLPAGSEGEVLR-HDDNGVALL 1270 Query: 1319 ISPREAVAEGVTLYTPDTIRVG 1340 ++ + +T ++ + Sbjct: 1271 MAAPDGTERHLT-FSVEDRDFR 1291 Score = 152 bits (384), Expect = 1e-34, Method: Composition-based stats. Identities = 128/656 (19%), Positives = 218/656 (33%), Gaps = 129/656 (19%) Query: 804 GLARSGRDVRLYSSLDETRTAEKLA-----RHPSFTVVSEQIKTRAGETSLETAISHQKS 858 L R+G R+ T + + +P +EQ A E T + + Sbjct: 199 ALERAGLHQRI---DHRTLEEQGIELKPDTYNPHVAEHAEQSGDLAREKDRITQVRRDNA 255 Query: 859 ALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLL 918 A + + L VV +K FS D+ E + E+ ++A + +L+ Sbjct: 256 AYLRAHPEHV---LTVVSAKATIFSEQDIKNE-FKRRLDNAAPDEIMSLVDAAMASRELV 311 Query: 919 YVDVAKGYGTGL----LVSRASYEAEKSI-LRHILEGKEAVMPLMERVPGELMEKLTSGQ 973 +D G L +RA E+++ L + ++++ L E L Q Sbjct: 312 QLDCTIEDRAGEKWPGLTTRARAYRERNLVLDAKVLARQSLNVDGSDRLDLLSEGLRETQ 371 Query: 974 RAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM 1033 R A ++ + DR ++V GY GVGKT + ++ V+G + +A E+ Sbjct: 372 RNAALEMV-SPDRLSLVTGYGGVGKTYTIGQ----AAKVWKARGYEVLGGAISGKATQEL 426 Query: 1034 RSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGR 1093 + + +AS L + + G P +F LDE MVG + R ++ GG+ Sbjct: 427 ST--IPEMEIAS-LAAWESRWARGALPVQGKFVFFLDEIGMVGGDTLVRVLKRVSDMGGK 483 Query: 1094 AVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALS 1153 + SGD +QLQ + + + V+ L Sbjct: 484 LIVSGDGEQLQPV------------------------------------MDSSIVDALLE 507 Query: 1154 GLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIV 1213 E V Q+ RQ+ + E S + + + + F + + A+V Sbjct: 508 VKEPVLMDQIVRQKNRYQREAS-RQLAQGGKHIDHALDYYSREGHIHFLENNEETFAALV 566 Query: 1214 RDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGE 1273 + Y + + N D L ++ Sbjct: 567 QRYFDTPVGHSSERIAGAVSNRDVWALQDLLRAE-------------------------- 600 Query: 1274 LRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYT 1333 +R L + I I L+D L+ Sbjct: 601 -------AINRGVLGEREQELGEIIRIDHRG----LRDVRLKLPLL-------------- 635 Query: 1334 PDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAV--SGDSVTLSDGQQTREIRPGQEQAE 1391 V G+R+ FT S RE G +S+ TV A+ + L D + +A Sbjct: 636 -----VREGERLIFTASHRELGIPKSSMGTVVAMPYKALDILLDDTDTPVRVHL---EAF 687 Query: 1392 QHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYT 1447 D AYA T H QG S+ L NR L VA++R ++ V +Y Sbjct: 688 NSFDYAYAATIHKMQGMSKERIHILAHPRMNRYLGN------VAMTRHEEGVDLYV 737 Score = 150 bits (377), Expect = 6e-34, Method: Composition-based stats. Identities = 123/736 (16%), Positives = 228/736 (30%), Gaps = 139/736 (18%) Query: 872 LPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLL 931 L +V +++ F+ +L+ A S+ G G E+ + +++ + G Sbjct: 1601 LSLVAAERAIFTEEELVRSAGSYLEAGRGEARDLAEL--VLDMPEVVQIAQTGPGGQAQY 1658 Query: 932 VSRASYEAEKSILRHILEGKEAVMPLMERVPGELME-KLTSGQRAATRMILETSDRFTVV 990 + A E ++ + + E+ +L+ LT GQR +L+ R T+V Sbjct: 1659 STGARSAVEMDLISRGVAMATDRFDVDEQAHLDLLSPSLTKGQRPGALAMLDAK-RLTLV 1717 Query: 991 QGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVDAQTLASFLHDT 1050 G G GK+ + ++ V+G + ++ V +A L Sbjct: 1718 TGDPGAGKSYVIGE----AAKVWQARGYEVIGGASSGPITQDLA-TDVKHMDVA-TLAAW 1771 Query: 1051 QLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQ 1110 + + G P +F +DE+ MVG AR I A GG+ VA G QLQ + Sbjct: 1772 EARWERGWRPASGRFVFFMDEAGMVGGDTWARVQKRIDALGGKLVAVGGPGQLQPTSESS 1831 Query: 1111 PFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAW 1170 + + M E++RQ L + A+S L R Sbjct: 1832 AQLVLMEQEQIGFTAMYEVIRQENHLERHASKQLEEGGSEAISALRFYHDKGDIR----- 1886 Query: 1171 APEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIV 1230 F + I + Y R A ++ + + Sbjct: 1887 ------------------------------FTEDVSGAIAQIAQRYFERG--APDKRIAL 1914 Query: 1231 THLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLV 1290 + N D LN+ + + GEL + + Sbjct: 1915 AYTNRDVWALNAALRSEAGQRGELQGPERDCGEIVRI----------------------- 1951 Query: 1291 DNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKS 1350 L+D E ++ P + ++T + Sbjct: 1952 ------------------LRDGERERKIHLPLKLRTGDRIMFTASHRGL----------- 1982 Query: 1351 DRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASE 1410 G +S TV A+ V + + TR + D YA T H +QG S+ Sbjct: 1983 ----GIPKSSFGTVQAIRAQQVDILIDKHTRPV-TVDLNEFSSFDYGYATTVHKSQGMSK 2037 Query: 1411 TFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYT-----DNRQGWTDAINNAVQKGT 1465 + L NR ++ V +R Q ++Y ++ A+ + Sbjct: 2038 DYVYGLGHGYMNRHVLT------VMATRHHQAFELYAPKDRLEDMAALEAAMLRSAY--- 2088 Query: 1466 AHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPARFIAPGRKYPQP 1525 + PD + + S R +A V +A L D+PA + Sbjct: 2089 ---LRLDDPDADPTSPA--LSPRRSSPGLATPGVVEPRADLLPEDTPAPVV--------- 2134 Query: 1526 YVALPAFDRNGKSAGIW--LNPLTTDDGNGLRGFSGEGRVKGSGDAQFVALQGSRNGESL 1583 AF+ + +G+ ++ L + + GE + V + +L Sbjct: 2135 -----AFEADAHLSGVANRISGLLKAEFTQGQALVGEDPWGYTSSPAKVVDDLLKQQSTL 2189 Query: 1584 LADNMQDGVRIARDNP 1599 A ++ + +P Sbjct: 2190 RAADVAGALTRVTQHP 2205 Score = 137 bits (344), Expect = 5e-30, Method: Composition-based stats. Identities = 159/1104 (14%), Positives = 337/1104 (30%), Gaps = 146/1104 (13%) Query: 243 EAVGEDASLK--SRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRAD 300 EA+GEDA + R + R + P I+ E ++ A Sbjct: 1523 EALGEDALAERFQRGLDLYGARAEEARRGPGIEGLEPR-----LVDELPDPWSQAPAPVL 1577 Query: 301 LRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAG 360 + + + ++ ++ ++ + FT +++ L G AR Sbjct: 1578 ESPASVEIRAANAAFLRAHPEHMLSLVAAERAIFTEEELVRSAGSYLEAGRG---EARDL 1634 Query: 361 IDEAISREQLIPLDREK----GLFTSGIHVLDELSVR----ALSRDIMKQNRVTVHPEKS 412 + + +++ + + +++G E+ + A++ D + S Sbjct: 1635 AELVLDMPEVVQIAQTGPGGQAQYSTGARSAVEMDLISRGVAMATDRFDVDEQAHLDLLS 1694 Query: 413 VPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRS 472 T G + D L +V+G G AG+ + E + + +G EV A+ Sbjct: 1695 PSLTKGQRPGALAML-DAKRLTLVTGDPG-AGKSYVIGEAAKVWQARGYEVIGGASSGPI 1752 Query: 473 QMNMKQDERLSGELITGRRQLLEGMAFTPGS---TVIVDQGEKLSLKETLTLLDGAARHN 529 ++ D + + + P S +D+ + + Sbjct: 1753 TQDLATDVKHMDVATLAAWEARWERGWRPASGRFVFFMDEAGMVGGDTWARVQKRIDALG 1812 Query: 530 VQVL-ITDSGQRTGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFA 588 +++ + GQ T + + V + Q G +I + + R+A Sbjct: 1813 GKLVAVGGPGQLQPTSESSAQL----VLMEQEQIGFTAMYEVIRQENHLERHAS-----K 1863 Query: 589 ASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRD 648 + G E+++ + ++ IR G + + Sbjct: 1864 QLEEGGSEAISALRFYHDK----GDIRFTEDVSGAIA-------------------QIAQ 1900 Query: 649 MYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPE 708 Y E+ P+ R Y V A + +L Q + R Sbjct: 1901 RY-----FERGAPDKRIALAYTNRDVWALNAALRSEAGQRGELQGPERDCGEIVRILRDG 1955 Query: 709 KMP--------VADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPV 760 + + G+R+ T GL + V ++ + +++ P T+ + Sbjct: 1956 ERERKIHLPLKLRTGDRIMFTASHRGLGIPKSSFGTVQAIRAQQVDILIDKHTRPVTVDL 2015 Query: 761 SD----------SPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGR 810 ++ + + + +V GH + + T+ R Sbjct: 2016 NEFSSFDYGYATTVHKSQGMSKDYVYGLGHGYMNRHVLTVMATRHHQAFELYAPKDRLED 2075 Query: 811 DVRL-----------YSSLDETRTAEKLARHPSFT--------------------VVSEQ 839 L D T+ L+ S Sbjct: 2076 MAALEAAMLRSAYLRLDDPDADPTSPALSPRRSSPGLATPGVVEPRADLLPEDTPAPVVA 2135 Query: 840 IKTRAGETSLETAISHQKSALHTPAQQAI-----------HLALPVVESKKLAFSMVDLL 888 + A + + IS A T Q + + + ++ D+ Sbjct: 2136 FEADAHLSGVANRISGLLKAEFTQGQALVGEDPWGYTSSPAKVVDDLLKQQSTLRAADVA 2195 Query: 889 TEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRH-I 947 F L E A ++ D G + +++ E ++ + Sbjct: 2196 GALTRVTQHPATFLRLFRE--AMQHPDLIIISDEGIGGEGRIYSTKSQVAFEAGVVDQGL 2253 Query: 948 LEGKEAVMP----LMERVPGELMEKL------TSGQRAATRMILETSDRFTVVQGYAGVG 997 G +P + R G L+++L Q A R + S R ++V+G +G G Sbjct: 2254 RLGLSTHLPGRDVKVPRPDGILLDQLVRRHGLDEQQAKALRDVANGS-RLSLVRGASGSG 2312 Query: 998 KTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAG-VDAQTLASF--LHDTQLQQ 1054 KT R + E+ V L PT +G +R AG ++ F L + Sbjct: 2313 KT---RLASTLAKGYREAGSDHVYTLAPTGAGLGALREAGERRVFSVRHFTELASAGPKG 2369 Query: 1055 RSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRL 1114 + ++ +LD++ + R + L+ G + V D +Q G +++ Sbjct: 2370 ADPVLSLTAGSMIVLDDAGQLDVEAANRLFDLVDKSGAQLVLLADPEQPGPFGAGSVWQM 2429 Query: 1115 QQTRSAADVAIMKEIVRQT-PELREAVYSLIN-RDVERALSGLESVKPSQVPRQEG-AWA 1171 + R + + + RQ+ P L +A++ L ERA GL++++ + V + G + A Sbjct: 2430 LEARMGS--IALGDSHRQSDPGLAKALFDLAAPEQGERAAQGLKALEAAGVFQAGGTSHA 2487 Query: 1172 PEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVT 1231 ++ + + A + + E + I+ + A+ + Sbjct: 2488 TIETLARDYVADGSGTKSALAWSGAEVEKLNTAIRAELDEIMPERAAFKDTAQHAGPVAA 2547 Query: 1232 HLNEDRRVLNSMIHDVREKAGELG 1255 DR L G +G Sbjct: 2548 LQVGDRIALTEYYDAAALGPGSIG 2571 >UniRef50_C2AVA8 TrwC relaxase n=1 Tax=Tsukamurella paurometabola DSM 20162 RepID=C2AVA8_TSUPA Length = 1024 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 117/618 (18%), Positives = 191/618 (30%), Gaps = 142/618 (22%) Query: 67 SRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGD---KRLIDAHNQAVDFAVRQVEALAST 123 R + + + GYDLTF+ KSVS++ LG + + + H +A D ++R +E A Sbjct: 173 GRQRAATRQPVAGYDLTFTPVKSVSVLWSLGDEDTRRTIEACHREAADESIRYLEDNALV 232 Query: 124 RVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVT-QHNGEWKTLSSDKVGK 182 + G LV+A F+H +RD EP LHTH V+N +G W ++ K Sbjct: 233 TRRGGKGEAQIDAGGLVIAAFDHYDNRDGEPNLHTHYAVSNKVLGSDGRWSSIDGTPWFK 292 Query: 183 TGFIENVYANQIAFGRLYREKLKEQVE-ALGYETEVV----GKHGMWEMPGVP---VEAF 234 Y L +++ LG E K + E+ G+ + + Sbjct: 293 A---------ASTASARYNAALADKLTDRLGVEFRSRSKGADKEPVLEIAGITDTRIASH 343 Query: 235 SGRSQTIRE---------------AVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQ 279 +GR+ TI + A G A + R A LDTR++K + Sbjct: 344 AGRTATIEQRYAELEADYIDRHQRAPGRAARYQLRQKANLDTRRAKAALATGSAADRGDG 403 Query: 280 TLKETGF----------DIRAYRDAADQRADLRTLTPGPAS-------QDGPDVQQAVTQ 322 G D+ A+ DAA RA L A V + Sbjct: 404 AAVVHGLGATLERARKVDVAAHPDAARGRALLEHCQAEAARLTDFRADTARLSVDELADL 463 Query: 323 AIAGLSERKVQFT--------------------------YTDVLARTVGILPPENGVIER 356 A L +R ++ D++ + + ++ I+ Sbjct: 464 TTAKLEQRFNSWSPTTVTRWATIVVAQQATEGTLPDGVARADLIEQVTAAVTRDSLRIDA 523 Query: 357 ARAGIDEAI---------SREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQ----- 402 +D + + I L TS V E ++ S + Sbjct: 524 VHPVLDTSTGLIPEAMQRRNGEHILTPVGSTLLTSTRVVESEHNLILASETVTSTVATDA 583 Query: 403 ----NRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMARE 458 V E G + V LA+ G G G+ + + Sbjct: 584 AVKAAIAAVGEETGFALNEGQARLVEHFCSSGALLAVGVGPAG-TGKTTSMKATIAAWEN 642 Query: 459 --------QGREVQIIAADRRSQMNMKQDERL---------------------------- 482 QGR+V +A + M + + + Sbjct: 643 TTGLPQSVQGRKVIALAPSAAAAMKLGDELGMGTSGDPADAARTIDTEVVFFTANMKALA 702 Query: 483 ---SGELITGRRQLLEGMAFT--PGSTVIVDQGEKLSLKETLTLLDGAARHNVQV-LITD 536 T ++L E M GS ++VD+ S +L A V L+ D Sbjct: 703 AAREAGDTTQVKRLRERMTRRIPRGSMLLVDEAGMASTANLHEILRIAKATGSVVRLLGD 762 Query: 537 SGQRTGT--GSALMAMKD 552 Q G AL + Sbjct: 763 PLQLDAVDRGGALELLAK 780 Score = 119 bits (298), Expect = 9e-25, Method: Composition-based stats. Identities = 96/616 (15%), Positives = 192/616 (31%), Gaps = 66/616 (10%) Query: 775 VETPGHSVSDSATV-FASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSF 833 V G ++ + V A+ A A L + + + + ++LA + Sbjct: 407 VHGLGATLERARKVDVAAHPDAARGRALLEHCQAEAARLTDFRADTARLSVDELADLTTA 466 Query: 834 TVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKS 893 + + I + A + A ++E A + L +A Sbjct: 467 KLEQRFNSWSPTTVTRWATIVVAQQATEGTLPDGVARA-DLIEQVTAAVTRDSLRIDAVH 525 Query: 894 FAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSIL------RHI 947 + + Q + G+ + V G+ LL S E+E +++ Sbjct: 526 PVLDTSTGLIPEA---MQRRNGEHILTPV----GSTLLTSTRVVESEHNLILASETVTST 578 Query: 948 LEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMS 1007 + AV + V E L GQ + V G AG GKTT +A ++ Sbjct: 579 VATDAAVKAAIAAVGEETGFALNEGQARLVEHFCSSGALLAVGVGPAGTGKTTSMKATIA 638 Query: 1008 AVNM---LPES-ERPRVV----------------GLGPTHRAVGEMRS---------AGV 1038 A LP+S + +V+ G+G + R+ A + Sbjct: 639 AWENTTGLPQSVQGRKVIALAPSAAAAMKLGDELGMGTSGDPADAARTIDTEVVFFTANM 698 Query: 1039 DAQTLASFLHDTQLQQRSGET---PDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAV 1095 A A DT +R E ++ L+DE+ M ++ + A G Sbjct: 699 KALAAAREAGDTTQVKRLRERMTRRIPRGSMLLVDEAGMASTANLHEILRIAKATGSVVR 758 Query: 1096 ASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGL 1155 GD QL A+ G L + A + ++VR + + A + + Sbjct: 759 LLGDPLQLDAVDRGGALELLAKHTDAPT--LTKVVR-----FVQSERAADGTLAAATTQV 811 Query: 1156 ESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRD 1215 + ++ + L ++ + + +T +V Sbjct: 812 VEDGVEKTVKKGLDTIAAENSLRMRDGHHDSLTMFDERGWTHHHSAKEAALT---DVVAA 868 Query: 1216 YTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGEL- 1274 + + ++V D + LN M+ + G + V + + G++ Sbjct: 869 HLA-DQQRGSNAMVVATTRADVKTLNEMLQAHHRETGT-DRTDRTVSLSDGLTAGRGDII 926 Query: 1275 -----RRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGV 1329 ++ D + + + + I +D G IT ++ + R+ P + + Sbjct: 927 VTRDNIKIKRRGGSHDRMPIANGELWTVEKIDRDGG-ITARNIDDGGRIELPADYLRANT 985 Query: 1330 TLYTPDTIRVGTGDRM 1345 L TI G + Sbjct: 986 ELGYALTIHRSQGATV 1001 >UniRef50_B5GIK2 Putative uncharacterized protein n=1 Tax=Streptomyces sp. SPB74 RepID=B5GIK2_9ACTO Length = 634 Score = 161 bits (406), Expect = 3e-37, Method: Composition-based stats. Identities = 101/416 (24%), Positives = 148/416 (35%), Gaps = 85/416 (20%) Query: 1 MMSIAQVRSAGSAGNYYTD---------------KDNYYVLGSMGERWAGRGAEQLGLQG 45 M+S+A+V+ +A YY KD G RW GRG LGL Sbjct: 1 MLSVAKVQRR-NAWRYYVRGVAFGDGRRPVGQSLKDAQETAGLPPGRWWGRGLTALGLTA 59 Query: 46 --SVDKDVFTRLL-EGRLPD-----------GADLSRMQDGSNRHRP------------- 78 V + +GR PD GAD + + + +P Sbjct: 60 GAEVSERQMELTFGQGRHPDADRIQQHLLDDGADPATARRATVLGQPIEEIEACNQTPLL 119 Query: 79 GYDLTFSAPKSVSMMAMLGG--DKRLID-AHNQAVDFAVRQVEALASTRVMTDGQSETVL 135 D TF S+ ++ LG +R+I+ AH +AVD A+R +E + + G+S Sbjct: 120 ALDFTFRPQASLIVLWALGDAHTRRVIERAHERAVDRALRWLEDEVAETRWSSGRSRA-K 178 Query: 136 TGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH-----NGEWKTLSSDKVGKTGFIENVY 190 T LV+A F H +RD P LH H +V N Q + +W L + +Y Sbjct: 179 TPALVVAAFRHFDNRDGFPLLHEHCLVLNRVQRLDGNGDPKWGALDT---------RRLY 229 Query: 191 ANQIAFGRLYREKLKEQV-EALGYETEVV----GKHGMWEMPGVPVEAF---SGRSQTIR 242 + +A G LY + +V E LG T G + E+ GV E + R Q I Sbjct: 230 RHVVAAGTLYTLAMTTEVCEELGLATVPREVTPGLRPVMEIAGVDSELIDWSATRRQQIE 289 Query: 243 EAV---------------GEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFD 287 + GE A AA DTR+ K+ P ++ W + F Sbjct: 290 GVLEGLTYKYAQEHGRLPGEQARHGLGWWAAQDTRREKKTPRPLEQLLAWWKASALLKFG 349 Query: 288 IRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLART 343 + + V AV A + R +F VLA Sbjct: 350 KQVVDGLLHRCRAAGAAIRARVDPHVDVVLAAVDVAAVVFTVR-GKFARRHVLAEA 404 >UniRef50_D1GQF3 Phage protein n=2 Tax=Staphylococcus RepID=D1GQF3_STAA0 Length = 761 Score = 161 bits (406), Expect = 3e-37, Method: Composition-based stats. Identities = 119/738 (16%), Positives = 232/738 (31%), Gaps = 114/738 (15%) Query: 718 LRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVET 777 + V + + + L+V A ++ + L + E Sbjct: 85 IEVESDGISGKKANEEFLRVILTDNQAEAIIDEFG------YSDELVKDILNDKVDITEV 138 Query: 778 PGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSL-DETRTAEKLARHPSFTVV 836 G + + ++ +T+M+ + + LA G ++ SL D + EKL Sbjct: 139 KGIKSATALSIKEKLTEMSKYSKAVIELAPLGASIKAVVSLADHYGSVEKLLH--IIENN 196 Query: 837 SEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAA 896 + + G K + + Q I V + +A L + F Sbjct: 197 IYDLTSAGGFGFKRIDEYGLKKGISIDSPQRIRAGALYVIEQMVALGDTKLSID--KFEE 254 Query: 897 EGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMP 956 E+ E++ + L+ D Y G + + E+ I+ H+ +++ Sbjct: 255 NLCDILEID-EVDDE--TFSLIINDPNVYYDNGYISLKKYRREEELIVEHLRRIRDSFTS 311 Query: 957 --------LMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSA 1008 +++ L Q+ A R + + ++ G AG GKT+ + + Sbjct: 312 YDTNELEDIIKMNEDRLGFTFNEQQKEAIRKAVS--NGVFILDGLAGSGKTSSLKTAIDI 369 Query: 1009 VNMLPESERPRVVGLGPTHRAVGEMRSAGVDAQTLASFLH---DTQLQQRSGETPDFSNT 1065 + V + +A + G+ A+T+ L + E P S Sbjct: 370 I-------GLPHVACALSGKAANVLSQNGLKAKTIHRTLRFDPVNFGFLHNEENP-LSEK 421 Query: 1066 LFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAI 1125 + +LDE+SMV N + + G + + GD+ QL +I+ G F + + Sbjct: 422 VVILDEASMVDNKLFLDLIKAVES-GSQLMIVGDSGQLPSISRGAVFDNLLDTTEFEHVT 480 Query: 1126 MKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEA 1185 + E+ RQ E SG V + ++ +T + +++ Sbjct: 481 LTEVHRQAKE-----------------SGTLQVANKIREGTQFNGYTDYGLTVYGDNKDF 523 Query: 1186 KLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIH 1245 Q +A +K V+ Y ++T Sbjct: 524 YYFGFQDRAAIKDNLLHT---------VKRYLSNKDMNPNDIQVITG------------- 561 Query: 1246 DVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDG 1305 ++ GEL V LN EL+ E ++ + + ++ K D Sbjct: 562 --LKEKGELS-----VVNLNK------ELQ-----ELFNPQKIVQNTLTGKVYEFRKGDR 603 Query: 1306 LITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVT 1365 +I +GN + R V G + K+ E + + Sbjct: 604 VIQ----QGNK--YTARTLGYSDFQ-------DVANGFALLENKTFEETEVFNGTFGEII 650 Query: 1366 AVSGDSVTLSDGQQTREIRPGQEQAEQH----IDLAYAITAHGAQGASETFAIALEGTEG 1421 + L + E+ + + + IDL YAI+ H +QG+ L G Sbjct: 651 ECASGVGMLIKFEGVEELVFYEHTQKTNEIGIIDLGYAISCHRSQGSGFK---TLVGALS 707 Query: 1422 NRKLMAGFESA-YVALSR 1438 M Y L+R Sbjct: 708 FSDYMLLSRQFLYTMLTR 725 >UniRef50_A6DHN1 ATP-dependent exoDNAse (Exonuclease V), alpha subunit-helicase superfamily I member n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DHN1_9BACT Length = 737 Score = 160 bits (405), Expect = 4e-37, Method: Composition-based stats. Identities = 70/365 (19%), Positives = 120/365 (32%), Gaps = 18/365 (4%) Query: 799 NATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKS 858 L GL + R L R+A + +P S + L + + + Sbjct: 166 KVFLQGLGLTARQCSLIMEQYGDRSAAIIKDNPYILAESIRGIGFIQADKLAQNLGIEAT 225 Query: 859 ALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLL 918 A +H + LL +A + + IK G ++ Sbjct: 226 NPFRTASGIVHTVKVQSQDGHTCMPREFLLNKASEML--KVDTANILEGLQRAIKDGSII 283 Query: 919 YVDVAKGYGTGLLVSRASYEAEKSILRHILE--GKEAVMPLMERVPGELMEKLTSGQRAA 976 L R + E+S+L H+L + P + L +L + Q+ A Sbjct: 284 EEV---HQEMSYLYERHLHNDEESLLDHLLGFIKLDKQYPHAQSEVDFLNSELNTEQKQA 340 Query: 977 TRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA 1036 + R +++ G GVGKTT + ++ ++ PT RA + A Sbjct: 341 VN--TSFNKRLSIITGGPGVGKTTTVKEIVQQSRK----HGKKIKLAAPTGRAAQRLGEA 394 Query: 1037 -GVDAQTLASFLHDTQLQQRS---GETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGG 1092 G A T+ L + E + ++DE SM+ + + +A I Sbjct: 395 SGARALTIHRLLMSDSESEGEFVFNEYKKLKCDILVVDEVSMLDISLARKLFAAIDHNET 454 Query: 1093 RAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAV-YSLINRDVERA 1151 V GD DQL ++ PG + + ++ RQ R IN E Sbjct: 455 HLVLVGDPDQLPSVGPGFVLNDLIESQLIPLTALHQVFRQASSSRIITNAHRINLGQEPD 514 Query: 1152 LSGLE 1156 L +E Sbjct: 515 LRQIE 519 Score = 66.8 bits (161), Expect = 7e-09, Method: Composition-based stats. Identities = 38/241 (15%), Positives = 77/241 (31%), Gaps = 21/241 (8%) Query: 360 GIDEAISREQLIPLDREKGLFTSGIHVL-DELSVRALSRDIMKQNRVTVHPEKSV----- 413 G+ AI +I ++ + H+ DE S+ +K ++ H + V Sbjct: 272 GLQRAIKDGSIIEEVHQEMSYLYERHLHNDEESLLDHLLGFIKLDKQYPHAQSEVDFLNS 331 Query: 414 PRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQ 473 AV+ R S+ I G G G+ V E+V +R+ G+++++ A R+ Sbjct: 332 ELNTEQKQAVNTSFNKRLSI-ITGGPG--VGKTTTVKEIVQQSRKHGKKIKLAAPTGRAA 388 Query: 474 MNMKQDERLSGELITGRRQ---------LLEGMAFTPGSTVIVDQGEKLSLKETLTLLDG 524 + + I + ++VD+ L + L Sbjct: 389 QRLGEASGARALTIHRLLMSDSESEGEFVFNEYKKLKCDILVVDEVSMLDISLARKLFAA 448 Query: 525 AARHNVQVLIT---DSGQRTGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYA 581 + +++ D G G L + ++ + R A+ R Sbjct: 449 IDHNETHLVLVGDPDQLPSVGPGFVLNDLIESQLIPLTALHQVFRQASSSRIITNAHRIN 508 Query: 582 R 582 Sbjct: 509 L 509 Score = 61.8 bits (148), Expect = 3e-07, Method: Composition-based stats. Identities = 67/421 (15%), Positives = 133/421 (31%), Gaps = 65/421 (15%) Query: 1070 DESSMVG--------NTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAA 1121 DE S++ + A + + +T+Q QA+ RL Sbjct: 301 DEESLLDHLLGFIKLDKQYPHAQSEVDFLNSEL----NTEQKQAVNTSFNKRLSIITGGP 356 Query: 1122 ---DVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTE 1178 +KEIV+Q+ + + + RA L ++ H + Sbjct: 357 GVGKTTTVKEIVQQSRKHGKKIKLAA--PTGRAAQRLGEASGARAL-------TIHRLLM 407 Query: 1179 FSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNED-- 1236 E + + K + D L ++ R E L++ + Sbjct: 408 SDSESEGEFVFNEYKKLKCDILVVDEVSMLDISLARKLFAAIDHN-ETHLVLVGDPDQLP 466 Query: 1237 ----RRVLNSMIHDVREKAGELG------------KEQVMVPVLNTANIRDGELRRLSTW 1280 VLN +I L + + ++R E + Sbjct: 467 SVGPGFVLNDLIESQLIPLTALHQVFRQASSSRIITNAHRINLGQEPDLRQIEGDHNDFY 526 Query: 1281 ETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVA---EGVTLYTPDTI 1337 H+D + ++ I+ + K+ + + +++ P E + LY + + Sbjct: 527 FIHQDD---PEKLFPMISKMIKERIPQKFDISAKDIQILMPMNRGKCGCEALNLYLQEDL 583 Query: 1338 -------------RVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIR 1384 R GDR+ T ++ + + + + + + ++ Sbjct: 584 NDIHKKQFNFGKSRFILGDRVIQTVNNYTKKVFNGDMGYIVDIYNEEKSFIIDFDGLQVS 643 Query: 1385 PGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQ 1444 E+AEQ I LAYAIT H +QG+ I T +M Y A++R K+ + Sbjct: 644 YDFEEAEQ-IRLAYAITIHKSQGSEFPAVIVPMNTS--HYIMLKKNLLYTAITRAKELLV 700 Query: 1445 V 1445 + Sbjct: 701 L 701 >UniRef50_UPI00016C0EC6 helicase, RecD/TraA family protein n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0EC6 Length = 740 Score = 160 bits (405), Expect = 4e-37, Method: Composition-based stats. Identities = 94/555 (16%), Positives = 162/555 (29%), Gaps = 114/555 (20%) Query: 935 ASYEAEKSILRHILEGKEAVMPL---------MERVPGELMEKLTSGQRAATRMILETSD 985 A Y E+ I + ++ A L M + EL L QR A I Sbjct: 276 ALYYKEQEIAKRLMTLASAEKKLNANFDVRKEMAQTERELKIDLVKEQREAI--INSMVK 333 Query: 986 RFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMR-SAGVDAQTLA 1044 TV+ G G GKTT +A++ V L E+ V+ PT RA M + + +T+ Sbjct: 334 GVTVITGGPGTGKTTIIKALIHMVAKLDET----VLLAAPTGRAAKRMEIATQAETKTIH 389 Query: 1045 SFLHDTQLQQRS--------GETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVA 1096 L + +S E + ++DE SMV M R V Sbjct: 390 RLLEIAFNKDKSFESQFFCRNEDNPLETDVLIVDEISMVDIYLMDSILK-ALRCNQRLVL 448 Query: 1097 SGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLE 1156 GDTDQL ++ G R V ++++ RQ E + + E ++ E Sbjct: 449 IGDTDQLPSVGAGNILRDIIKSGKIKVIRLEQVFRQAKESAIIINAHKINHGEEIIANKE 508 Query: 1157 SVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDY 1216 + + V + AK + ++ Sbjct: 509 KSDFFIIDEKTQNDVKNTLVDLMTKRLPAKYEDLDVMKDVQ------------------- 549 Query: 1217 TGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRR 1276 I+ + EL VM LN + E Sbjct: 550 ------------ILVP-----------MRKGLLGVHELNG--VMQNALNLKSDDKEEYEY 584 Query: 1277 LSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDT 1336 +T D ++ N Y+ I + GL+ Sbjct: 585 RNTLYRVGDKVMQTKNNYNLIWKVPAGSGLVV---------------------------- 616 Query: 1337 IRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDL 1396 D G + + + ++ ++ + +DL Sbjct: 617 --------------DEGMGVYNGDMGVIKEIDKYEKVITVEFDGKKRVDYEYANLGELDL 662 Query: 1397 AYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDA 1456 +Y T H +QG + I + ++ Y A++R K + + NR+ Sbjct: 663 SYVTTIHKSQG--SEYPIVILPLFSGPTVLLSRNLLYTAVTRAK-KMVIIVGNRETIRKM 719 Query: 1457 INNAVQKGTAHDVFE 1471 I+N + + Sbjct: 720 ISNNKEVERDTSLLH 734 Score = 56.0 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 57/412 (13%), Positives = 113/412 (27%), Gaps = 85/412 (20%) Query: 449 VAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQL-------LEGMAFTP 501 + L+ M + V + A R+ M+ + + I ++ E F Sbjct: 350 IKALIHMVAKLDETVLLAAPTGRAAKRMEIATQAETKTIHRLLEIAFNKDKSFESQFFCR 409 Query: 502 GS-------TVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQ--RTGTGSALMAMKD 552 +IVD+ + + ++L + VLI D+ Q G G+ L + Sbjct: 410 NEDNPLETDVLIVDEISMVDIYLMDSILKALRCNQRLVLIGDTDQLPSVGAGNILRDIIK 469 Query: 553 AG-VNTYRWQGGEQRPAT---IISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQA 608 +G + R + ++ II+ N +A + + + Sbjct: 470 SGKIKVIRLEQVFRQAKESAIIINAHKINHGEEIIAN-------KEKSDFFIIDEKTQND 522 Query: 609 ILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPET-RSHD 667 + + D ++ L Y VM+ Sbjct: 523 VKNTLV-------------------------DLMTKRLPAKYEDLDVMKDVQILVPMRKG 557 Query: 668 RYVIDRVTAQ-SHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPG 726 + + ++L L+ E R + L+R G+++ T Sbjct: 558 LLGVHELNGVMQNALNLKSDDKEEYEYRNT-------LYR-------VGDKVMQTKNNYN 603 Query: 727 L--RVSGGDRLQV---ASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENG-------- 773 L +V G L V V M V+ + V + E Sbjct: 604 LIWKVPAGSGLVVDEGMGVYNGDMGVIKEIDKYEKVITVEFDGKKRVDYEYANLGELDLS 663 Query: 774 WVETPGHSVSDSATV----FASVTQMAMDNATLNGLARSGRDVRLYSSLDET 821 +V T S + S + + L + + + ET Sbjct: 664 YVTTIHKSQGSEYPIVILPLFSGPTVLLSRNLLYTAVTRAKKMVIIVGNRET 715 >UniRef50_A8EUL3 Exodeoxyribonuclease V, alpha subunit n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EUL3_ARCB4 Length = 775 Score = 160 bits (405), Expect = 4e-37, Method: Composition-based stats. Identities = 93/576 (16%), Positives = 184/576 (31%), Gaps = 103/576 (17%) Query: 882 FSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEK 941 F + LL E+ F+ + + I+ + +L + Y AEK Sbjct: 237 FHLYKLLDESLRFSNQELLY---ESAISKMLVDEELFVT------SENRVALSMLYYAEK 287 Query: 942 SILRHILEGKE--------AVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGY 993 IL K+ + + + L +L+ Q+ A +I + ++ + GY Sbjct: 288 RILEFFSRRKDEKNKKIIASFDEYLVKKQETLGFELSVEQKKAVELI-NSGEKTLFLIGY 346 Query: 994 AGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA-GVDAQTLASFLHDTQL 1052 AG GK+T RA++ + + + ++ + + A + G ++ T+ S L Sbjct: 347 AGTGKSTSSRAILELLEEIMSYDD--IMTIALSGIASQRISDTTGYNSSTIQSLLV---- 400 Query: 1053 QQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPF 1112 + E F LLDE+SMV + + + I + GD QL AI G Sbjct: 401 --KHKEKDFFPYKAILLDEASMVNSVTFYQIISKIDDDTI-FIIVGDDGQLPAIGAGNIL 457 Query: 1113 RLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAP 1172 A + + +I RQ AV I D+ R + + ++ + Sbjct: 458 ADAIKYELAPICKLTKIYRQNENQAIAV---IANDIRRG-----EIPSYKEDYEDFRFID 509 Query: 1173 EHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPE---AREQTL- 1228 ++ + E + + + ++DY + ++ TL Sbjct: 510 VSIANYYAMKNSVSSNDFADLRGENSEYILNNILNISSTYIQDYYDFIKKKKISKALTLF 569 Query: 1229 -IVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWE-THRDA 1286 ++T K G LG + + + + N G+ +E D Sbjct: 570 QVITP----------------MKGGVLGVDNLNIQLQKLFNHTKGKAFASKIYEYKLTDK 613 Query: 1287 LVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMR 1346 ++ + N A+ +++Y + Sbjct: 614 VIHIKNE-----------------------------NMKAQTMSMYKSGSTDF------- 637 Query: 1347 FTKSDRERGYVANSVWTVTAVS--GDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHG 1404 ER + + + + + + E + LAY +T H Sbjct: 638 -----LERRVYNGQLGLIIKLDFEEEKCIVLYPNDDMVVFYDFENVHHLLSLAYCLTIHK 692 Query: 1405 AQGASETFAIALEGTEGNRKLMAGFESAYVALSRMK 1440 QG + AL + +M + Y A++R K Sbjct: 693 TQGM--EYDNALIPMSFSHYIMHNTKLLYTAITRAK 726 >UniRef50_Q314D9 ATP-dependent DNA helicase, RecD/TraA family n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q314D9_DESDG Length = 740 Score = 160 bits (403), Expect = 6e-37, Method: Composition-based stats. Identities = 86/551 (15%), Positives = 165/551 (29%), Gaps = 96/551 (17%) Query: 810 RDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIH 869 R++R + + A KL + + I + +A+ Sbjct: 189 RELRGFGFKKVDKIARKLG------TPKDHTPR------IRAGIQYC-------MHEALD 229 Query: 870 LALPVVESKKLAFSMVDLLTEA-KSFAAEGTGFTE-LGGEINAQIKRGDLLYVDVAKGYG 927 DL+ +A + + ++ I LL + G Sbjct: 230 QG-------NCWVEYEDLVDQANLLLVMDNLDSRIRIEASLDNLISE-RLLSCESHAGRF 281 Query: 928 TGLLVSRASYEAEKSILRHILEGKEAVMPL------MERVPGELMEKLTSGQRAATRMIL 981 L+ + E+ I I +A P ++++ E L Q A L Sbjct: 282 --LVALSDILKMEQDIAA-IFTKADASNPHFKSTRNLQKLILRQAETLNEKQLEAVHSAL 338 Query: 982 ETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRS-AGVDA 1040 + S +++ G AG GK+ +S +N + E VV PT +A + +G Sbjct: 339 QHS--ISLISGGAGSGKSYT----VSVINAVCEECDLEVVLSAPTGKAAKRLEEVSGRTG 392 Query: 1041 QTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDT 1100 T+ L + ++DE SMV + + + V GD Sbjct: 393 TTIHRLLGYDGKSFSKDSNNPIDADILIIDEFSMVDVSLAWHLFNAVDFARTAIVIVGDH 452 Query: 1101 DQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKP 1160 +QL + PG R +A I+ ++VRQ L+E +++ +V + Sbjct: 453 NQLPPVGPGNILRDLIHSNAIPTVILDKVVRQAGVLKENSTAILKGEVRKTSDA------ 506 Query: 1161 SQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRT 1220 + W T+ ++ L ++ G Sbjct: 507 --STQGCRDWYLADQFTDPGAARNFLLDLFDKRLDALGFDLIKDVQ-------------- 550 Query: 1221 PEAREQTLIVTHLNE---DRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRL 1277 ++T ++ + LN + + +K L ++ + +L R Sbjct: 551 --------VLTPTHKGPLGTKSLNEDLQRLIQK------------RLWNVSVPETQLGRR 590 Query: 1278 STWETHRDALVLVDNVYHRIAG------ISKDDGLITLQDAEGNTRLISPREAVAEGVTL 1331 S + H + +N + + L D EG I + + L Sbjct: 591 SPFLKHDKVIQTRNNYDLNVMNGAIGHVVDVLPNGTLLIDFEGVAVEIEKGSPNLQDIQL 650 Query: 1332 YTPDTIRVGTG 1342 TI G Sbjct: 651 AYALTIHKTQG 661 Score = 66.8 bits (161), Expect = 8e-09, Method: Composition-based stats. Identities = 50/308 (16%), Positives = 104/308 (33%), Gaps = 27/308 (8%) Query: 284 TGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLART 343 GF + A + + TP + +Q + +A+ + Y D++ + Sbjct: 192 RGFGFKKVDKIARKLGTPKDHTP----RIRAGIQYCMHEALDQGNCW---VEYEDLVDQA 244 Query: 344 VGILPPENGVIE-RARAGIDEAISREQLIPLDREKGLFTSGIH--VLDELSVRALSRDIM 400 +L +N R A +D IS E+L+ + G F + + E + A+ Sbjct: 245 NLLLVMDNLDSRIRIEASLDNLIS-ERLLSCESHAGRFLVALSDILKMEQDIAAIFTKAD 303 Query: 401 KQNRVTVHPEKSVPRTAGYSDAVSV----LAQDRPSLAIVSGQGGAA-GQRERVAELVMM 455 N ++ ++ +I GGA G+ V+ + + Sbjct: 304 ASNPHFKSTRNLQKLILRQAETLNEKQLEAVHSALQHSISLISGGAGSGKSYTVSVINAV 363 Query: 456 AREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGS-------TVIVD 508 E EV + A ++ +++ +G I +G +F+ S +I+D Sbjct: 364 CEECDLEVVLSAPTGKAAKRLEEVSGRTGTTIHRLLGY-DGKSFSKDSNNPIDADILIID 422 Query: 509 QGEKLSLKETLTLLDGAA-RHNVQVLITDSGQR--TGTGSALMAMKDAGVNTYRWQGGEQ 565 + + + L + V++ D Q G G+ L + + Sbjct: 423 EFSMVDVSLAWHLFNAVDFARTAIVIVGDHNQLPPVGPGNILRDLIHSNAIPTVILDKVV 482 Query: 566 RPATIISE 573 R A ++ E Sbjct: 483 RQAGVLKE 490 Score = 64.9 bits (156), Expect = 3e-08, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 56/169 (33%), Gaps = 2/169 (1%) Query: 1277 LSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDT 1336 L ++ DAL ++ + L T E RLI R Sbjct: 531 LDLFDKRLDALGFDLIKDVQVLTPTHKGPLGTKSLNEDLQRLIQKRLWNVSVPETQLGRR 590 Query: 1337 IRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDL 1396 D++ T+++ + + ++ V V + L D + Q I L Sbjct: 591 SPFLKHDKVIQTRNNYDLNVMNGAIGHVVDVLPNGTLLIDFEGVAVEIEKGSPNLQDIQL 650 Query: 1397 AYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQV 1445 AYA+T H QG+ A+ + M Y ++R ++ V Sbjct: 651 AYALTIHKTQGSEFPCAVVVVH--KAHSFMHHRNLLYTGVTRARKTAIV 697 >UniRef50_Q036N8 ATP-dependent DNA helicase, RecD/TraA family n=9 Tax=Lactobacillus RepID=Q036N8_LACC3 Length = 860 Score = 159 bits (402), Expect = 9e-37, Method: Composition-based stats. Identities = 103/540 (19%), Positives = 176/540 (32%), Gaps = 91/540 (16%) Query: 929 GLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKL-----------TSGQRAAT 977 GL+ S + E S+ R I ++ PLM P EL + L QRAA Sbjct: 291 GLVTSCDMFATEGSVARIIKVAQKTAEPLM--APDELDDALDQFLDRFHLTINDQQRAAF 348 Query: 978 RMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAG 1037 + + +V+ G AG GKT ++ N +++ V+ L PT RA + Sbjct: 349 QNV--NHHGLSVLNGSAGTGKTWLTDLLVRFFN--AQAKGKSVL-LAPTGRAAKVLAKYT 403 Query: 1038 VD-AQTLASFLHDTQLQQRSGETPD------FSNTLFLLDESSMVGNTDMARAYALIAAG 1090 + A T+ ++LH ++ D L ++DESSM+ + Sbjct: 404 HEPAATIHAYLHLLPGEETGQFDADADWETFGDARLIVVDESSMLTTPLAYTVLKNVNFK 463 Query: 1091 GGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVER 1150 + GD QL I PG + + + RQ + + V +L NR +R Sbjct: 464 KAHVLFVGDVFQLPPIGPGNFLKDCLDDEQVAATTLTRVYRQ--DSQSGVLALANRIRDR 521 Query: 1151 ALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYE 1210 + + +V ++ ++ +A KA + Sbjct: 522 ---------LALPFGPDDDRYVSGNVALYNQRNAGRVFDAGVKAYQDALVKSGQQIDAQL 572 Query: 1211 AIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIR 1270 IV G T R N+ + + G+ + + ++ + Sbjct: 573 LIVNKNIGAT---------------GRLRFNAEL-QALVNPAKNGEPEYISSYVDPVTNQ 616 Query: 1271 DGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVT 1330 LR + I K+D + L D + R E + Sbjct: 617 KHHLR------------------LNDRVMILKNDKHVPLVDPKTWERRAVLGENGLQQTD 658 Query: 1331 LYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDS--VTLSDGQQTREIRPGQE 1388 + R+ ++ V + V + G+Q G Sbjct: 659 DFGTK----------RWRETI----VANGDTGVVAHIDTKRHFVVVQIGKQYCYYSFGSV 704 Query: 1389 QAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTD 1448 + + LAYAIT H AQG IA+ +M +S Y AL+R +Q + D Sbjct: 705 PRD--LTLAYAITVHKAQGGQADTVIAIVNGA---DMMLNAQSFYTALTRTQQQFIFFGD 759 >UniRef50_UPI0000E0F58B exodeoxyribonuclease V, alpha subunit n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0F58B Length = 674 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 97/601 (16%), Positives = 180/601 (29%), Gaps = 81/601 (13%) Query: 895 AAEGTGFTELGGEINAQIKR---GDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGK 951 A+ T + E+ I A I G LL +D L SR YE E+ I + I + Sbjct: 105 GAQCTSYEEIEMSIQALIAHPIHGQLLVID------KQRLFSRKVYEYEQFISQQISQKI 158 Query: 952 EAVMPLMERVPGELMEKLTSGQR----AATRMILETSDRFTVVQGYAGVGKTTQFRAVMS 1007 + + E+L A + + F ++ G G GKT + Sbjct: 159 TTSNERLNPNVKTVFEQLYPSPIKNIWQAIASVTALNQSFFIINGGPGTGKTYTVIRTL- 217 Query: 1008 AVNMLPESERPRVVGLGPTHRAVGEMRSA-----------GV----------DAQTLASF 1046 +++ +R PT +A M + G+ A T+ Sbjct: 218 LLHLAQADKRLNFALCAPTGKAAQRMSESIVNEVQHLSRQGIAPELLANIPTTASTVHRL 277 Query: 1047 LHD--TQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQ 1104 L + + + + + ++DE+SM+ M R + + R + GDT QL Sbjct: 278 LGLGYHRNYAKYHQGNPLPHDVLVIDEASMLDTRLMFRILSAVKPST-RILLIGDTAQLP 336 Query: 1105 AIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVP 1164 ++ G + V + Q E + S + G S Sbjct: 337 SVESGNILKDVM---PVHVNQFSSTMMQWVESVSSELSSQYLTSCAEIPGENSQWNDYAA 393 Query: 1165 RQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAR 1224 H V E +++ A+ + P+ Sbjct: 394 TLLTNMRSTHHVNELANAIYQNNVNGAITALDNVITRWSTSSPKLSNLASSTLLYRPDEV 453 Query: 1225 EQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHR 1284 ++ + ++ N++I + D + L + Sbjct: 454 DEQQV-------KQNFNALI----------------------KTMSDAYFKPLLSMLEPT 484 Query: 1285 DALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDR 1344 DAL L+ RI + + + +L+ P + + G Sbjct: 485 DALALLRQ--FRILSPIRHSAMGIEGINKAIDQLLDPSTNKSAD------SDRHLYHGKA 536 Query: 1345 MRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHG 1404 + T++D + G + +T + + AYA+T H Sbjct: 537 ILITQNDMQLGIYNGDSGVILRNEAQQLTAYIDRGDQAPLAISPYRIAKFQSAYAMTIHK 596 Query: 1405 AQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKG 1464 QG+ + + G M+ E Y ++R KQ+V V T + AI + Sbjct: 597 TQGSEFDQVLIVL-PSGLIHPMS-KELLYTGITRAKQYVAV-TGAAPDFVKAIYTTHARH 653 Query: 1465 T 1465 T Sbjct: 654 T 654 Score = 70.7 bits (171), Expect = 5e-10, Method: Composition-based stats. Identities = 79/556 (14%), Positives = 172/556 (30%), Gaps = 96/556 (17%) Query: 345 GILPPENGVIERARAGIDEAISR---EQLIPLDREKGLFTSGIHVLDELSVRALSRDIMK 401 + + E I I+ QL+ +D+++ LF+ ++ ++ + +S+ I Sbjct: 102 SLTGAQCTSYEEIEMSIQALIAHPIHGQLLVIDKQR-LFSRKVYEYEQFISQQISQKITT 160 Query: 402 QNRV------TVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMM 455 N TV + A++ + S I++G G + L++ Sbjct: 161 SNERLNPNVKTVFEQLYPSPIKNIWQAIASVTALNQSFFIINGGPGTGKTYTVIRTLLLH 220 Query: 456 AREQGREVQII--AADRRSQMNMKQD-----ERLS---------------GELITGRRQL 493 + + + A ++ M + + LS + L Sbjct: 221 LAQADKRLNFALCAPTGKAAQRMSESIVNEVQHLSRQGIAPELLANIPTTASTVHRLLGL 280 Query: 494 LEGMAFT--------PGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQ--RTGT 543 + P +++D+ L + +L +LI D+ Q + Sbjct: 281 GYHRNYAKYHQGNPLPHDVLVIDEASMLDTRLMFRILSAVKPSTRILLIGDTAQLPSVES 340 Query: 544 GSALMAMKDAGVNTYRWQ-----------GGEQRPATIISEPDRNVRYARLAGDFAASVK 592 G+ L + VN + Q + P N ++ D+AA++ Sbjct: 341 GNILKDVMPVHVNQFSSTMMQWVESVSSELSSQYLTSCAEIPGENSQW----NDYAATLL 396 Query: 593 AGEESVAQV---SGVREQAILTQAIRS----------------ELKTQGVLGLPEVTMTA 633 S V + Q + AI + L + +L P+ Sbjct: 397 TNMRSTHHVNELANAIYQNNVNGAITALDNVITRWSTSSPKLSNLASSTLLYRPDEVDEQ 456 Query: 634 LSPVWLDSRSRYLRDMY-RPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQV 692 ++ + + D Y +P + M + ++ I S + Q+ Sbjct: 457 QVKQNFNALIKTMSDAYFKPLLSMLEPTDALALLRQFRILSPIRHSAMGIEGINKAIDQL 516 Query: 693 VRIS---SLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVV 749 + S S DS L+ G+ + +T L + GD + +T + Sbjct: 517 LDPSTNKSADSDRHLYH--------GKAILITQNDMQLGIYNGDSGVILRNEAQQLTAYI 568 Query: 750 PGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDS-ATVFASVTQM---AMDNATLN-G 804 + P++ SP+ K ++ + T + V + M L G Sbjct: 569 DRGDQA---PLAISPYRIAKFQSAYAMTIHKTQGSEFDQVLIVLPSGLIHPMSKELLYTG 625 Query: 805 LARSGRDVRLYSSLDE 820 + R+ + V + + + Sbjct: 626 ITRAKQYVAVTGAAPD 641 >UniRef50_D2SC15 TrwC relaxase n=4 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2SC15_9ACTO Length = 1223 Score = 158 bits (400), Expect = 2e-36, Method: Composition-based stats. Identities = 141/746 (18%), Positives = 221/746 (29%), Gaps = 148/746 (19%) Query: 10 AGSAGNYYTDK-----DNYYVLGSMG-----ERWAGRGAEQLGLQGSVDKDVFTRLLEGR 59 A +A +Y + D+YY+ G GR E L G D + + G Sbjct: 11 APAAARHYVEAGRGRADDYYLTEGAGLARRYTAGDGRVTELDVLAG----DGYEAWVAGL 66 Query: 60 LPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLI--DAHNQAVDFAVRQV 117 PD R ++ + PKS S+ A L D A ++A + + Sbjct: 67 DPDTGAARGRLRTDERAVRFVEVVINGPKSWSLAAALHPDIAAAYDAAQDRAAVQIIGWL 126 Query: 118 EALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSS 177 A+TRV G V L H TSR +P H H ++ G W+ L + Sbjct: 127 GEHATTRVGPRGGQVQVPVERLEAVTVRHYTSRAGDPHRHLHLQMSARVLAAGRWRGLHT 186 Query: 178 DKVGK-TGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVEAFSG 236 V I + +A +R L GY + G E+ V AFS Sbjct: 187 VGVRDFLAAINGIGHAAVACDPQFRAALAAH----GYTLDGTGDLP--ELADY-VGAFSA 239 Query: 237 RSQTI------------REAVGEDASLKSRDV----AALDTRKSKQHVDP-EIKMAEWMQ 279 R+ I E G+ R A + R K P A W+ Sbjct: 240 RAAQIGRNLDRYERQWTIEHPGQTPGPGLRRAWDRRAWAEGRPDKVTPQPGADLTARWVA 299 Query: 280 TLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDV 339 L G R R + P G D AV + ++ L+ + + DV Sbjct: 300 ELAALG-----------HRDPERPVALTPTPIGGVDRDGAVERVLSRLAAGRSAWNAADV 348 Query: 340 ------LARTVGILPPENGVIERARAGIDEAISREQLIPLDREK-------GLFTSGIHV 386 L G++ IE A A++R L+ LDR+ +T+ + Sbjct: 349 RGEIEQLLAASGVVVDAGVRIELAEDLTARAMARCVLL-LDRDGAVVPEHIRAWTAQPVL 407 Query: 387 LDELSVRALSRDIMKQNRVTVHPEKSVPRTA--------GYSDAVSVLAQDRPSLAIVSG 438 E + E A G + AV+ LA DR SL ++ G Sbjct: 408 DVEADLTDRLAARSTPAPADRRREHEPELLAVVRGRLDTGQAAAVTALASDR-SLIVLEG 466 Query: 439 QGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSG-------------- 484 G AG+ +A + +GR + ++ ++ + + Sbjct: 467 AAG-AGKTTTLAAARQLLEARGRRLLVVTPTLKAAKVAAAEVGTAAGSAAWLAFQHGWRW 525 Query: 485 ----------------ELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARH 528 T G ++VD+ L LL A Sbjct: 526 NRDGVWARLAVGDADPRTGAVYTGPEREAGLTSGDLLVVDEAGMLDQDTARALLTVADEA 585 Query: 529 NVQV-LITDSGQRTGTG------------SALMAMKDAGVNTYRWQGGEQR--------- 566 ++ L+ D Q G + + G++ + ++ Sbjct: 586 GARLALLGDRHQLAAVGRGGVLDLAAGRVDPMAHLVLDGIHRFTCTDQDRHTSPDTEYAE 645 Query: 567 --------------------PATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVRE 606 I PD LA AA + GE V + Sbjct: 646 LTLAMRTGADPGAVFDALAARGRIRLHPDPAALQETLATLVAAHHRDGEPMAVVVDTREQ 705 Query: 607 QAILTQAIRSELKTQGVLGLPEVTMT 632 A L AIR L G + V ++ Sbjct: 706 AAELGAAIRDRLVADGRVDDTRVAIS 731 Score = 109 bits (273), Expect = 8e-22, Method: Composition-based stats. Identities = 98/541 (18%), Positives = 154/541 (28%), Gaps = 117/541 (21%) Query: 931 LVSRASYEAEKSILRHILEGKEAVMPLMERVPGE------LMEKLTSGQRAATRMILETS 984 ++ + E + + + P R E + +L +GQ AA L + Sbjct: 401 WTAQPVLDVEADLTDRLAA-RSTPAPADRRREHEPELLAVVRGRLDTGQAAAV-TALASD 458 Query: 985 DRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPT-HRAVGEMRSAGVDAQTL 1043 V++G AG GKTT +A L E+ R++ + PT A G A + Sbjct: 459 RSLIVLEGAAGAGKTTTL----AAARQLLEARGRRLLVVTPTLKAAKVAAAEVGTAAGSA 514 Query: 1044 ASFLHDTQLQQR------------------------SGETPDFSNTLFLLDESSMVGNTD 1079 A + E S L ++DE+ M+ Sbjct: 515 AWLAFQHGWRWNRDGVWARLAVGDADPRTGAVYTGPEREAGLTSGDLLVVDEAGMLDQDT 574 Query: 1080 MARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREA 1139 + G R GD QL A+ G L R Sbjct: 575 ARALLTVADEAGARLALLGDRHQLAAVGRGGVLDLAAGR--------------------- 613 Query: 1140 VYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGE 1199 ++ L G+ + R +T + A A Sbjct: 614 ----VDPMAHLVLDGIHRFTCTDQDRHTSPDTEYAELTLAMRTGADPGAVFDALAARGRI 669 Query: 1200 AFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQV 1259 P L E + + E +V E L + I D G + +V Sbjct: 670 RLHPDPAALQETLATLVAAHHRDG-EPMAVVVDTREQAAELGAAIRDRLVADGRVDDTRV 728 Query: 1260 MVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLI 1319 + A R G R++T RD V + + I D L+ Sbjct: 729 AIS---GAGQRIGVGDRIATRRNDRDLGVANRDT-WTVTAIGSHDELV------------ 772 Query: 1320 SPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQ 1379 V GD + +R + TV V+ Q Sbjct: 773 -------------------VRCGDPV-----PTDRAAADVTPSTVDGVTP--------AQ 800 Query: 1380 TREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRM 1439 + E H++LAY TAHG QG + A + G G +AYV ++R Sbjct: 801 AGQRVLPTEYVTAHVELAYVSTAHGVQGDTVPAAHLVVG------EHTGAAAAYVGMTRG 854 Query: 1440 K 1440 + Sbjct: 855 R 855 >UniRef50_Q11MY8 MobA/MobL protein n=1 Tax=Chelativorans sp. BNC1 RepID=Q11MY8_MESSB Length = 1168 Score = 158 bits (399), Expect = 2e-36, Method: Composition-based stats. Identities = 93/463 (20%), Positives = 164/463 (35%), Gaps = 68/463 (14%) Query: 856 QKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRG 915 Q + A + L V+ + +FS DL K + +E+ ++ + RG Sbjct: 240 QIRKANEQAARDPEHVLGVLTRNQASFSEYDLDRHLKKHIRDEGERSEVKAKV---LGRG 296 Query: 916 DLLYV-DVAKGYGTGLLVSRASYEAEKSIL---RHILEGKEAVMPLMERVPGELMEKLTS 971 D+L + D G G G +RA + E L R ++ G + + R L + Sbjct: 297 DVLALHDRDTGDGVGRWTTRAVRDQEVLALADGRQVVGGSHRNLGDVARQRVTAARALRA 356 Query: 972 GQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVG 1031 Q AA S +++G AG GK+ ++ A E+ RV+GL PT+ Sbjct: 357 DQLAAFDHA-TGSGGLKIIEGRAGTGKSFVLGSIREA----HEAAGYRVIGLAPTNAVAQ 411 Query: 1032 EMRSAGV----------------DAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMV 1075 M+ G + +S +H + ++G TL ++DE++M+ Sbjct: 412 AMKDEGFGPGLGRTDFGSSGFGRAGLSRSSTVHAELFRLKNGRVQWDRRTLVVVDEAAMM 471 Query: 1076 GNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPE 1135 G + + +GD QL +I G F + + A + ++ RQ + Sbjct: 472 DAKVTGEVLREARLYGAKVILAGDDRQLGSIERGGLFTELKKEHGS--AEITQVTRQKVD 529 Query: 1136 LREAVY-SLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKA 1194 + A L + E AL A+ KA Sbjct: 530 WQRAAARDLSDGRFEDALRSF----------------------------------ARNKA 555 Query: 1195 MLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGEL 1254 ++ ++ L E +D +R + + N+D VLN + VR++ GEL Sbjct: 556 IVWTSKQEELRGKLVEQWAKDSHDHPSSSR---FVFAYTNKDVDVLNKDLRAVRKERGEL 612 Query: 1255 GKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRI 1297 G++ V A G+ + + V RI Sbjct: 613 GEDFVFTTKHGEAPFAVGDRVQFTDTAKGAGIYNGNAGVIDRI 655 Score = 71.0 bits (172), Expect = 4e-10, Method: Composition-based stats. Identities = 84/617 (13%), Positives = 181/617 (29%), Gaps = 103/617 (16%) Query: 295 ADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVI 354 + A++R A++ + + L+ + F+ D+ + E Sbjct: 230 PEAEANVRAEQIRKANEQAARDPE---HVLGVLTRNQASFSEYDLDRHLKKHIRDEGERS 286 Query: 355 ERARAGIDEAISREQLIPLDREK-----GLFTSGIHVLDELSVRALSRDIMKQNRVTV-- 407 E + + R ++ L G +T+ E+ A R ++ + + Sbjct: 287 EVK----AKVLGRGDVLALHDRDTGDGVGRWTTRAVRDQEVLALADGRQVVGGSHRNLGD 342 Query: 408 ----HPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREV 463 + A A A L I+ G+ G G+ + + G V Sbjct: 343 VARQRVTAARALRADQLAAFDH-ATGSGGLKIIEGRAG-TGKSFVLGSIREAHEAAGYRV 400 Query: 464 QIIAADRRSQMNMKQDERL--------------------SGELITGRRQLLE--GMAFTP 501 +A M +DE + L+ + + Sbjct: 401 IGLAPTNAVAQAM-KDEGFGPGLGRTDFGSSGFGRAGLSRSSTVHAELFRLKNGRVQWDR 459 Query: 502 GSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMKDAGVNTYRWQ 561 + V+VD+ + K T +L A + +V++ ++ G+ ++ G+ + Sbjct: 460 RTLVVVDEAAMMDAKVTGEVLREARLYGAKVILAGDDRQLGS------IERGGL--FTEL 511 Query: 562 GGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQ 621 E A I + V + R A A + G A S R +AI+ + + EL+ Sbjct: 512 KKEHGSAEITQVTRQKVDWQRAA---ARDLSDGRFEDALRSFARNKAIVWTSKQEELR-- 566 Query: 622 GVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETR---SHDRYVIDRVTAQS 678 G ++EQW ++ S R+V Sbjct: 567 -------------------------------GKLVEQWAKDSHDHPSSSRFVFAYTNKDV 595 Query: 679 HSLTLRDAQGETQVVRISSLDSSWSLFRPE-KMPVADGERLRVTGKIPGLRVSGGDRLQV 737 L + L + + P A G+R++ T G + G+ + Sbjct: 596 DVL---NKDLRAVRKERGELGEDFVFTTKHGEAPFAVGDRVQFTDTAKGAGIYNGNAGVI 652 Query: 738 ASVSED----AMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVT 793 + + +T+ E + S F+ + G + T T Sbjct: 653 DRIDRNFGRIGVTLDAAAGREGRKVEWYASEFSGFRHGYAGTIYKGQGKTLDHTYLL-HT 711 Query: 794 QMAMDNATLNGLARSGRDVRLY----SSLDETRTAEKLARHPSFTVVSEQIKTRAGETSL 849 ++ L R ++ ++ D + A ++ R+ + Sbjct: 712 HHWRAASSYVALTRQRESATIFVATETARDLRQLARQIGRNEIKSASVAYATHDELSAEQ 771 Query: 850 ETAISHQKSALHTPAQQ 866 + + ++A + Sbjct: 772 KVRLGELRAAEAGAVAE 788 Score = 59.5 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 45/141 (31%), Gaps = 16/141 (11%) Query: 1336 TIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGD----SVTLSDGQQTREIRPGQEQAE 1391 GDR++FT + + G + + + + VTL + +E Sbjct: 624 EAPFAVGDRVQFTDTAKGAGIYNGNAGVIDRIDRNFGRIGVTLDAAAGREGRKVEWYASE 683 Query: 1392 -QHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTD-- 1448 YA T + QG + L S+YVAL+R ++ ++ Sbjct: 684 FSGFRHGYAGTIYKGQGKTLDHTYLL------HTHHWRAASSYVALTRQRESATIFVATE 737 Query: 1449 ---NRQGWTDAINNAVQKGTA 1466 + + I K + Sbjct: 738 TARDLRQLARQIGRNEIKSAS 758 >UniRef50_B0B9E0 Exodeoxyribonuclease V alpha chain n=15 Tax=Chlamydiaceae RepID=B0B9E0_CHLT2 Length = 746 Score = 157 bits (397), Expect = 3e-36, Method: Composition-based stats. Identities = 60/281 (21%), Positives = 104/281 (37%), Gaps = 19/281 (6%) Query: 866 QAIHLALPVVESK-KLAFSMVDLLTEAKSFAAEGTGFTELGGE-INAQIKRGDLLYVDVA 923 I +L ++ + + + D + + E + E I QI Sbjct: 217 AGIQYSLDELQEEGHTCYPLNDFIVLVEKLLNEEAPEEIIRKEEIRTQIHFLSRQKTVYV 276 Query: 924 KGYGTGLLV-SRASYEAEKSI---LRHILEGKEAVMPLMER-----VPGELMEKLTSGQR 974 K + SR + AE+ I +R +L + + + + V L KL Q+ Sbjct: 277 KELEQDTYIWSRQLFLAEQQIAIDIRRLLFSSKRIRSINTQEAILEVENLLDLKLEEKQK 336 Query: 975 AATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMR 1034 A +S + ++ G G GK+T RA++S + S +++ PT +A M Sbjct: 337 EALH--ASSSQKIHIISGGPGTGKSTITRAILSIFEKI--SSPKKIILAAPTGKAAKRMT 392 Query: 1035 S-AGVDAQTLASFLHD--TQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGG 1091 G QT+ S L L R L ++DES M+ + R A + Sbjct: 393 EITGKRTQTIHSLLQYDFKTLSFRKNHEDPIDCDLVIVDESGMIDTILLQRFLAALPDH- 451 Query: 1092 GRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQ 1132 + GD QL ++ PG + +V + +I RQ Sbjct: 452 AILILIGDVHQLPSVGPGNVLKDLILSHHIEVTYLTKIFRQ 492 Score = 72.6 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 94/668 (14%), Positives = 199/668 (29%), Gaps = 123/668 (18%) Query: 225 EMPGVP---VEAFSGRSQTIREAVGEDASLKSRDVA-ALDTRKSKQHVDPEIKMA----- 275 E+ G+ E FS + Q R+ L+ +A R K++ + I+ Sbjct: 125 EVDGISPARCEDFSKQLQEQRDLRHALLFLQRHGIAIHYGLRLYKKYQNQTIEKVCQDPF 184 Query: 276 EWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSER-KVQF 334 + + GF + ADL G + + ++ L E + Sbjct: 185 LLAKEMYGIGF----------KTADLIATCLGVPLNSPNRIVAGIQYSLDELQEEGHTCY 234 Query: 335 TYTD---VLARTVGILPPENGVI-ERARAGIDEAISREQLI---PLDREKGLFTSGIHVL 387 D ++ + + PE + E R I +SR++ + L+++ +++ + + Sbjct: 235 PLNDFIVLVEKLLNEEAPEEIIRKEEIRTQI-HFLSRQKTVYVKELEQDTYIWSRQLFLA 293 Query: 388 DELSVRALSRDI----------MKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVS 437 ++ + R + ++ + V + +A+ A + I+S Sbjct: 294 EQQIAIDIRRLLFSSKRIRSINTQEAILEVENLLDLKLEEKQKEALH--ASSSQKIHIIS 351 Query: 438 GQGGAAGQRERVAELVMMARE--QGREVQIIAADRRSQMNMKQDERLSGELITGRRQL-L 494 G G G+ ++ + + +++ + A ++ M + + I Q Sbjct: 352 G-GPGTGKSTITRAILSIFEKISSPKKIILAAPTGKAAKRMTEITGKRTQTIHSLLQYDF 410 Query: 495 EGMAFTPGS-------TVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSAL 547 + ++F VIVD+ + L H + +LI D Q G Sbjct: 411 KTLSFRKNHEDPIDCDLVIVDESGMIDTILLQRFLAALPDHAILILIGDVHQLPSVG-PG 469 Query: 548 MAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQ 607 +KD +S E Sbjct: 470 NVLKD----------------------------------------------LILSHHIEV 483 Query: 608 AILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHD 667 LT+ R L+ ++ PV S + ++ E Sbjct: 484 TYLTKIFRQ-LQNSNIITNAHKVNQGEFPVLNSSSGKKDFLFFQKEDPEEAIKHIIHLVS 542 Query: 668 RYVIDRVTAQSHSLTLRDA--QGETQVVRISSLDSSWSLFRPEKM-------PVADGERL 718 +V + + + + +G ++ ++ + P K+ + G+R+ Sbjct: 543 DFVPKKFGIFTKDIQVLAPMRKGVLGILNLNRELK--AALNPNKLFIQGKFHSFSTGDRV 600 Query: 719 RVTGKIPGLRVSGGDRLQVASV--SEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVE 776 T V GD V S+ S ++ V V GR +S S L + Sbjct: 601 MQTRNNYNKEVFNGDIGYVTSIDLSTKSLIVCVDGR------YISYSQAELNDLIPAYAT 654 Query: 777 TPGHSVSDSAT-----VFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHP 831 + + + S M N + R + V L + A + + Sbjct: 655 SIHKYQGSETSCIILPIHTSHYVMLYRNLLYTAITRGKKLVILVGTKKAVAIAVRNDKVQ 714 Query: 832 SFTVVSEQ 839 +Q Sbjct: 715 HRCTGLQQ 722 Score = 60.6 bits (145), Expect = 5e-07, Method: Composition-based stats. Identities = 44/229 (19%), Positives = 89/229 (38%), Gaps = 15/229 (6%) Query: 1228 LIVTHLNEDRRVLNSMIHDVREKAGELGK----EQVMVPVLNTANIRDGEL--RRLSTWE 1281 LI++H + + L + + + + Q PVLN+++ + L ++ E Sbjct: 475 LILSH-HIEVTYLTKIFRQ-LQNSNIITNAHKVNQGEFPVLNSSSGKKDFLFFQKEDPEE 532 Query: 1282 THRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVT---LYTPDTI- 1337 + + LV + + GI D + +G +++ + + L+ Sbjct: 533 AIKHIIHLVSDFVPKKFGIFTKDIQVLAPMRKGVLGILNLNRELKAALNPNKLFIQGKFH 592 Query: 1338 RVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLA 1397 TGDR+ T+++ + + VT++ + +L R I Q + I A Sbjct: 593 SFSTGDRVMQTRNNYNKEVFNGDIGYVTSIDLSTKSLIVCVDGRYISYSQAELNDLIP-A 651 Query: 1398 YAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVY 1446 YA + H QG+ + I T +M Y A++R K+ V + Sbjct: 652 YATSIHKYQGSETSCIILPIHTS--HYVMLYRNLLYTAITRGKKLVILV 698 >UniRef50_A0R7T4 ATPase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A0R7T4_PELPD Length = 686 Score = 157 bits (396), Expect = 4e-36, Method: Composition-based stats. Identities = 82/470 (17%), Positives = 165/470 (35%), Gaps = 30/470 (6%) Query: 882 FSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEK 941 D++++A G E+ ++++ + V G +L + + EK Sbjct: 152 VKPEDVISQAAKELDSENGSNIERIELAGELEQMEGREEIVRLGD---MLALKRHHATEK 208 Query: 942 SILRHIL----------EGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQ 991 I + + +E + ++ + Q + +M+ R V Sbjct: 209 RICEALRRRVELPPVPIKSPSETQRFIESIEQKIGITFSEEQVDSIKMVAAG-HRTIAVT 267 Query: 992 GYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRS-AGVDAQTLASFLHDT 1050 GYAG GK+T +A++ + L + + +V + + A +R+ +G ++ T+ S L Sbjct: 268 GYAGTGKSTVSKALIQLL--LSKFDEDQVCCMALSGIASDRIRTLSGFNSFTIHSALGWR 325 Query: 1051 QLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQ 1110 + G + +LDE SMV + M + + GD QL I G Sbjct: 326 GQEFEHGPDNQLGYQVIVLDEGSMVNSFIMRNLIEAVDR-DAVLILMGDPGQLPPIGAGD 384 Query: 1111 PFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERAL--SGLESVKPSQVPRQEG 1168 PFR VA + I RQ+ + +V S D+ R + +G + + + Sbjct: 385 PFRNIIESGIIPVARLTRIYRQSDD---SVLSFFANDIRRGVVPTGYLQEEGFKDFQFVQ 441 Query: 1169 AWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTL 1228 P + + E Q+ + EA + + D+ +P + Sbjct: 442 KNLPGNYFRLSDKDKVPLREENSQRIIEFIEAKMRAISPYIKNPILDFQLLSPIRKGPLG 501 Query: 1229 IVTHLNEDRRVLNSMIHDVRE-KAGEL--GKEQVMVPVLNTANIRDGELRRLSTWETHRD 1285 + +RV N H+ R + G + +V LN +++ + LS + + D Sbjct: 502 TEALNDVAQRVFNPGEHEGRAVQVGSVTFKPGDKVVHTLNR-DMQIVKAHSLSDYHNNID 560 Query: 1286 ---ALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLY 1332 + + I D+ + + EG A + + Sbjct: 561 SSETKRVFNGSVGVILDGDSDNRELLVAYPEGFIAKYDSLLLSAGVLEMA 610 Score = 50.2 bits (118), Expect = 7e-04, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 50/155 (32%), Gaps = 31/155 (20%) Query: 1316 TRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKS------------DRERGYVANSVWT 1363 R+ +P E V + ++ GD++ T + D ++ Sbjct: 510 QRVFNPGEHEGRAVQV---GSVTFKPGDKVVHTLNRDMQIVKAHSLSDYHNNIDSSETKR 566 Query: 1364 VTAVSGDSVTLSDGQQTREIRPGQEQ------------AEQHIDLAYAITAHGAQGASET 1411 V +G + DG + +++AYA+T H QG Sbjct: 567 V--FNGSVGVILDGDSDNRELLVAYPEGFIAKYDSLLLSAGVLEMAYALTTHKCQG--SE 622 Query: 1412 FAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVY 1446 + L +M + Y A++R KQ V + Sbjct: 623 YRFVLIPISSAHTIMLTAQWLYTAVTRAKQKVLMV 657 >UniRef50_B5ZL31 TrwC relaxase n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZL31_GLUDA Length = 322 Score = 153 bits (385), Expect = 8e-35, Method: Composition-based stats. Identities = 77/297 (25%), Positives = 115/297 (38%), Gaps = 41/297 (13%) Query: 8 RSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQ-------LGLQGSVDKDVFTRLLEGRL 60 S YY D G W + + V F L G Sbjct: 44 WSGRDRAAYYVDNG----TGEKPGIWWTNVLKAPVQPLPFVCQSAEVSPSDFRALARGCD 99 Query: 61 PDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGD---KRLIDAHNQAVDFAVRQV 117 P G + R GYDL F+APKSVS++ +G D R+ A +AV A+ Sbjct: 100 PLTGQALVQSKG--QRRVGYDLQFAAPKSVSVLWAMGTDIQRARIESAQAKAVFAALDYA 157 Query: 118 EA--LASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH-NGEWKT 174 L TR +G + L+ F H TSR +PQ+HTHAV+ NV + +G T Sbjct: 158 LRTGLIVTRRGHNGG-QRETPAELMAGTFLHTTSRAGDPQIHTHAVLMNVCRRKDGSTGT 216 Query: 175 LSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEA-LGYETEVVGKHGMWEMPGVP--- 230 + + + +Q G +YR L E +E +G T G++ + + GV Sbjct: 217 VDN---------RELLLHQQEMGAVYRLALSEALERDIGLTTLKDGRN--FRVAGVAPSV 265 Query: 231 VEAFSGRSQTIREAVGEDA--SLKSRDVA---ALDTRKSKQHVD-PEIKMAEWMQTL 281 E FS R I + + + R+ A + +TR +K + + A W Q Sbjct: 266 EERFSKRRAAIEQEARKRGIQTAHHREAAEHISRNTRAAKSDLPSRAVLRARWEQEC 322 >UniRef50_A0LD23 Helicase, RecD/TraA family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LD23_MAGSM Length = 742 Score = 153 bits (385), Expect = 8e-35, Method: Composition-based stats. Identities = 88/512 (17%), Positives = 159/512 (31%), Gaps = 114/512 (22%) Query: 967 EKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPT 1026 L+ QR A + I T D+ ++ G G+GKTT R V+ ++ V PT Sbjct: 340 FSLSVDQRQALKTI--TQDKVAILTGGPGMGKTTITRYVIEHAVENKQT----VKLCAPT 393 Query: 1027 HRAVGEMRSA-GVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYA 1085 RA ++ A G A T+ + + G+ F L ++DESSM+ MA + Sbjct: 394 GRAAKQLAEATGEVALTIHRLMGKGSDESVDGQRK-FECDLLVVDESSMMD-EWMASSLL 451 Query: 1086 LIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLIN 1145 + R + GD DQL ++A G+ + VA + E+ RQ Sbjct: 452 QMLPDHCRLLLVGDADQLPSVAAGRVLQDLIQSGVVPVARLTEVHRQ------------- 498 Query: 1146 RDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVP 1205 E + L +V+ R + A + + A + + K + Sbjct: 499 --AEGSGIALGAVEILHGRRPQMARDFKFVAVTGGMEHLHQCANRMLEGIDKMMRVGGID 556 Query: 1206 MTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLN 1265 + I + + LN +H+ Sbjct: 557 GAEIQVITPMH---------------GTEVGVKALNERLHEQL----------------- 584 Query: 1266 TANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAV 1325 + ++ ++ L L Y ++ ++ Sbjct: 585 ------------NPYQAGQEVLELDGFAYR------AGCRIMQTKND------------- 613 Query: 1326 AEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRP 1385 + L+ D G+ + +K A V A ++ L D +Q I P Sbjct: 614 -YDLELFNGDQ-----GEIVEISK-------DAQGELQVIAKFDEAQKLLDREQMGNIVP 660 Query: 1386 GQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQV 1445 YAIT H +QG + + T M Y ++R ++ V + Sbjct: 661 C-----------YAITVHKSQGGQFNYVVTPVVT--AHGKMLYRNLFYTCVTRARKGVVL 707 Query: 1446 YTDNRQGWTDAINNAVQKGTAHDVFEPKPDRE 1477 + + AI+ + +R Sbjct: 708 V-GSYEALVMAISYKENMQRNTGLLSRIEERM 738 Score = 66.4 bits (160), Expect = 9e-09, Method: Composition-based stats. Identities = 84/620 (13%), Positives = 185/620 (29%), Gaps = 90/620 (14%) Query: 257 AALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDV 316 AAL TR + + A+ ++ ++E + + R QRAD L G D + Sbjct: 170 AAL-TRAVSKCLREADPQADPLKMVQENPYLLAQVRGITFQRADAAALQLGMQRLDPRRI 228 Query: 317 QQAVTQAIAGLSE-------RKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQ 369 + + + + L+ + +F + + + ++ +D + + Sbjct: 229 EAGMQEILIQLANNEGHTLLEEPRFHQQLTVLLALQGHQDQLNLVPMVLERLD--LGQGP 286 Query: 370 LIPLDREKG----------LFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGY 419 L+ + G + I + + + + Sbjct: 287 LVRVYGRDGSPFVQLTRYHDYEKQIAYHISRLHGPSPIETISDGWIERVSRGHFSLSVDQ 346 Query: 420 SDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQD 479 A+ + QD+ +AI++G G G+ ++ A E + V++ A R+ + + Sbjct: 347 RQALKTITQDK--VAILTGGPGM-GKTTITRYVIEHAVENKQTVKLCAPTGRAAKQLAEA 403 Query: 480 ERLSGELIT-----GRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLI 534 I G + ++G ++VD+ + +LL H +L+ Sbjct: 404 TGEVALTIHRLMGKGSDESVDGQRKFECDLLVVDESSMMDEWMASSLLQMLPDHCRLLLV 463 Query: 535 TDSGQ--RTGTGSALMAMKDAGVNTYRWQG--GEQRPATIISEPDRNV---RYARLAGDF 587 D+ Q G L + +GV Q + I+ + R ++A DF Sbjct: 464 GDADQLPSVAAGRVLQDLIQSGVVPVARLTEVHRQAEGSGIALGAVEILHGRRPQMARDF 523 Query: 588 AASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLR 647 G R + + +R G+ + ++P+ Sbjct: 524 KFVAVTGGMEHLHQCANRMLEGIDKMMRVG-------GIDGAEIQVITPMHGTE------ 570 Query: 648 DMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRP 707 A E +++ + + Sbjct: 571 ----------------------------------VGVKALNERLHEQLNPYQAGQEVLEL 596 Query: 708 EKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDA-MTVVVPGRAEPATLPVSDSPFT 766 + G R+ T L + GD+ ++ +S+DA + V + + A + Sbjct: 597 DGFAYRAGCRIMQTKNDYDLELFNGDQGEIVEISKDAQGELQVIAKFDEAQKLLDREQMG 656 Query: 767 ALKLENGWVETPGHSVSDSAT---VFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRT 823 + + V + +M N + R+ + V L S + Sbjct: 657 NIVPCYAITVHKSQGGQFNYVVTPVVTAHGKMLYRNLFYTCVTRARKGVVLVGSYEALVM 716 Query: 824 A----EKLARHPSFTVVSEQ 839 A E + R+ E+ Sbjct: 717 AISYKENMQRNTGLLSRIEE 736 >UniRef50_D1VA45 TrwC relaxase n=1 Tax=Frankia sp. EuI1c RepID=D1VA45_9ACTO Length = 1579 Score = 152 bits (384), Expect = 1e-34, Method: Composition-based stats. Identities = 105/545 (19%), Positives = 190/545 (34%), Gaps = 85/545 (15%) Query: 78 PGYDLTFSAPKSVSMMAMLGGD---KRLIDAHNQAVDFAVRQVEALASTRVMTDGQSETV 134 G+D+ +APKSVS++ G + + A + AVD + +E A+ + Sbjct: 214 LGFDVVCAAPKSVSLLWAFGDEVLRADVAAALDAAVDATIGYLERHAAFGKIGG---HNR 270 Query: 135 LTGNLVMALFNHDTSRDQEPQLHTHAVVAN-VTQHNGEWKTLSSDKVGKTGFIENVYANQ 193 + L +A + HD SR E LH H +V N V G+ + +S + E + ++ Sbjct: 271 PSRGLAVASYLHDVSRSVEAHLHVHNIVINAVVVAAGDDEPGASGWEWRAVDGEVLLSHV 330 Query: 194 IAFGRLYREKLKEQVE-ALGYETEVVGKHGMWEMPGVPVE---AFSGRSQTIRE------ 243 G + L+ ++ G E V ++G+ E+ P + AFS R + + E Sbjct: 331 RTAGFVGAAVLRRELAVRRGLEWGPV-RNGVAELAAFPADLLAAFSTRHREVAEEFAQIV 389 Query: 244 AVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRT 303 A G + S + A +R K + E ++ L+E G+ + R A Sbjct: 390 AAGLEPSGATMTAAQRGSRAPKTVLADETVRRLQVERLEEAGWTVGQVRQLAAGGEH--- 446 Query: 304 LTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTV----GILPPENGVIERARA 359 P D + GL+E+ F +++ + L E R Sbjct: 447 -RPPAIGDDDVAELFTLLAGPKGLTEKATTFGRREIVRQIAAWGGDRLDAEAIDRLADRF 505 Query: 360 GIDEAISREQLIPLDREKG-----LFTSGIHVLDELSVRALSRDIMKQNRVTVH------ 408 D + Q + + L+T + E +RA+ R+ Sbjct: 506 PADSRVVHLQAAAPGQRRRAQPEPLYTVEDMLDTEQRLRAVVREGRVVAGAAPRVLASPR 565 Query: 409 -------------------------------------PEKSVPRTAGYSDAVSVLAQDRP 431 V +A ++ V L D+ Sbjct: 566 VVDAFLAAADGFAGSTRPAAAGRRGAFGAHTIGANGAGSADVVLSAEQAELVRRLLADQD 625 Query: 432 SLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRR 491 + + G G G+ E + L + R +G V A R + + ++ Sbjct: 626 LVRVAVGAAG-TGKTEAMRVLTAIVRAEGHPVFATAHGGRQAEQLADRIGVPARVVASWL 684 Query: 492 QLLEGMAFTP----------GSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRT 541 LL+ + P GS +IVD+ ++ ++ LLD AAR V++ + Sbjct: 685 TLLDAIDADPARQLADVWPAGSVLIVDEATQVGTRDAERLLDYAARTGTVVILLGDPAQL 744 Query: 542 GTGSA 546 G+ +A Sbjct: 745 GSVAA 749 Score = 148 bits (374), Expect = 2e-33, Method: Composition-based stats. Identities = 100/626 (15%), Positives = 178/626 (28%), Gaps = 120/626 (19%) Query: 875 VESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVA------KGYGT 928 + K F +++ + ++ + + + ++++ A + Sbjct: 469 LTEKATTFGRREIVRQIAAWGGDRLDAEAIDRLADRFPADSRVVHLQAAAPGQRRRAQPE 528 Query: 929 GLLVSRASYEAEKSILRHILEGK---------------------------EAVMPLMERV 961 L + E+ + + EG+ + P Sbjct: 529 PLYTVEDMLDTEQRLRAVVREGRVVAGAAPRVLASPRVVDAFLAAADGFAGSTRPAAAGR 588 Query: 962 PGELMEK-------------LTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSA 1008 G L++ Q R +L D V G AG GKT R + + Sbjct: 589 RGAFGAHTIGANGAGSADVVLSAEQAELVRRLLADQDLVRVAVGAAGTGKTEAMRVLTAI 648 Query: 1009 VNMLPESERPRVVGLGPTHRAVGEMRSA-GVDAQTLASFLHDTQL----QQRSGETPDFS 1063 V +E V R ++ GV A+ +AS+L R + Sbjct: 649 VR----AEGHPVFATAHGGRQAEQLADRIGVPARVVASWLTLLDAIDADPARQLADVWPA 704 Query: 1064 NTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADV 1123 ++ ++DE++ VG D R A G + GD QL ++A G F L + DV Sbjct: 705 GSVLIVDEATQVGTRDAERLLDYAARTGTVVILLGDPAQLGSVAAGGWF-LHLIETTPDV 763 Query: 1124 AIMKEIVRQTPEL---REAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFS 1180 + + RQ A + + ++ L+ + + + Sbjct: 764 PTLTTVHRQAGADMAPIRAALDALRAETGTPIAALDRLATAGKIHLVDDPDTLFTQAVTD 823 Query: 1181 HSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVL 1240 E + + P P +T ++ + D L Sbjct: 824 WYAERRRHLGTTAPQTQTADGSSGPDGARPP------PARPPKPIKTHLMAERHRDVEAL 877 Query: 1241 NSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGI 1300 N + G L + V RD V Sbjct: 878 NRAARTLLTADGTLTGPALTV--------------------AGRDFQV------------ 905 Query: 1301 SKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANS 1360 D ++TL +A + P + + TG T D Sbjct: 906 --GDEVVTL------------TQAGHTLIPAGRPGSAYIRTGTIGVIT--DLHLDADNPP 949 Query: 1361 VWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTE 1420 TVT T+ T + + + AYA+TA AQG+ A AL + Sbjct: 950 AQTVTVYFPSKGTVVVP-WTYLTHQFDDGRDGGLAHAYALTAAKAQGSMMDTARALVTDD 1008 Query: 1421 GNRKLMAGFESAYVALSRMKQHVQVY 1446 +R + YV LSR + + Y Sbjct: 1009 TSRAGL------YVMLSRARTDLAAY 1028 >UniRef50_Q6N7J7 Possible Viral (Superfamily 1) RNA helicase n=1 Tax=Rhodopseudomonas palustris RepID=Q6N7J7_RHOPA Length = 1253 Score = 151 bits (382), Expect = 2e-34, Method: Composition-based stats. Identities = 116/613 (18%), Positives = 192/613 (31%), Gaps = 98/613 (15%) Query: 941 KSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTT 1000 SI+ +AV+P ME P +E+L +++ L RF+V+ G AG GKTT Sbjct: 593 HSIVHKWRALVDAVLPPMEAGPEAEVEELARREKSGALEQLACG-RFSVLIGPAGSGKTT 651 Query: 1001 QFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGV---DAQTLASFLHDTQLQQ--- 1054 + + LPE ++ L PT +A + A + QTLA FL + Sbjct: 652 LLKVLCD----LPEISSGGILLLAPTGKARVRLEEATKRLGEGQTLAQFLQRYERYDGAS 707 Query: 1055 ----RSGETPDFSN-TLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPG 1109 R+ + P ++DE SM+ ++ I G R + GD QL I G Sbjct: 708 GRYFRNPKAPREKGYRSVIVDECSMLTEDQLSALIDAIE-GVDRLILVGDPRQLPPIGAG 766 Query: 1110 QPFRLQQTRSAAD------------VAIMKEIVRQTPELREAVYSLINRDVERALSGLES 1157 +PF + A A + I RQ R V L + L + Sbjct: 767 RPFVDICRKLAPSEETPQFPKVAPGYAELTIIGRQRGTDRGDV-LLARQFSGEPLDA-GA 824 Query: 1158 VKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTL--------- 1208 + + R + E +L + + + + L Sbjct: 825 DEVWEALRSGTLSHVRTAHWALPSDLEPRLTDEIVRGLALADRSDQRGFELSIGGSEWEG 884 Query: 1209 ----YEAIVRDYTGRTPEAREQTLIVTHLNE---DRRVLNSMIHDVREKAGELGKEQVMV 1261 +E G EA I++ + +N I Sbjct: 885 HVLFWERRADQREGGAAEAAHDWQILSPVRAGAPGVEAINLAIQRRFRNK---------- 934 Query: 1262 PVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISP 1321 +R+ L + + GI D +I L++ G R Sbjct: 935 -------VRERALTPNAKYPKPAGPQ-----------GILWGDKVINLRN-NGRRRTYPR 975 Query: 1322 REAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTR 1381 +E I + G R R R V S V + Sbjct: 976 QEKPYVA-----NGDIGIVVGGYKRGKMKFRPRDL------EVEFASQPGVKFTYYAGEF 1024 Query: 1382 EIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQ 1441 G + ++LAYA+T H QG+ + E Y AL+R ++ Sbjct: 1025 SGEEGTPE----LELAYALTIHKTQGSQFERTFVVL---PRHCRPLSRELLYTALTRHQE 1077 Query: 1442 HVQVYTDNRQGWTDAINNAVQKGTA---HDVFE-PKPDREVMNAERLFSTARELRDVAAG 1497 + + ++ G ++ A D+F+ P P + F L + G Sbjct: 1078 ELNLLHEDDIGALRRYSDPSASEIARRMTDLFDAPGPVEVKTVSGPRFLDKHLLHRTSRG 1137 Query: 1498 RAVLRQAGLAGGD 1510 V ++ LA + Sbjct: 1138 EFVRSKSELAIAE 1150 Score = 62.6 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 114/855 (13%), Positives = 241/855 (28%), Gaps = 104/855 (12%) Query: 207 QVEALGYETEVVGK-HGMWEMPGVPVEAFSGRSQTIREAVGEDASLKSRDVAALDTRKSK 265 Q E LG+ + K + + ++ + S + +A+ R V T + Sbjct: 387 QAEKLGFGSTYRDKWKSLAPLRRQLLDLVARCSLSADQALRAY-QPSQRGVFTEPTSDAD 445 Query: 266 QHVDPEIKMAEWMQTLKETGFDIRAY----RDAADQRADLRTLTPGPASQDGPDVQQAVT 321 +P + + F + D + A L D V+ ++ Sbjct: 446 LLANPYLLYERDETAAQRIAFGVVDRGVFPADVIREIAPLPAQARMTDGIDKRRVRALIS 505 Query: 322 QAIAGLSERK--VQFTYTDVLARTVGILPPENGVIER----------ARAGIDEAISREQ 369 + + + + +++R G V++ A S ++ Sbjct: 506 DMLEHAVQNEGHTLLPRSWIVSRATGAPLDPRCVVDEDVIDMVADYLALTLETARTSDDE 565 Query: 370 LIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVH---------PEKSVPRTAGYS 420 L R G + I V I+ + R V PE V A Sbjct: 566 LALKLRRYGASRTAITSAVHKRVGGKRHSIVHKWRALVDAVLPPMEAGPEAEVEELARRE 625 Query: 421 DAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDE 480 + ++ +++ G G +G+ + L + + ++A ++++ +++ Sbjct: 626 KSGALEQLACGRFSVLIGPAG-SGKTTLLKVLCDLPEISSGGILLLAPTGKARVRLEEAT 684 Query: 481 R--LSGELITGRRQLLEGMAFTPG--------------STVIVDQGEKLSLKETLTLLDG 524 + G+ + Q E G +VIVD+ L+ + L+D Sbjct: 685 KRLGEGQTLAQFLQRYERYDGASGRYFRNPKAPREKGYRSVIVDECSMLTEDQLSALIDA 744 Query: 525 AARHNVQVLITDSGQR--TGTGSALMAMKD------------------AGVNTYRWQGGE 564 + +L+ D Q G G + + A + Q G Sbjct: 745 IEGVDRLILVGDPRQLPPIGAGRPFVDICRKLAPSEETPQFPKVAPGYAELTIIGRQRGT 804 Query: 565 QRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVR----EQAILTQAIRSELKT 620 R +++ A + ++++G S + + + LT I L Sbjct: 805 DRGDVLLARQFSGEPLDAGADEVWEALRSGTLSHVRTAHWALPSDLEPRLTDEIVRGLAL 864 Query: 621 QGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHS 680 ++ W + + +HD ++ V A + Sbjct: 865 ADRSDQRGFELSIGGSEW-----EGHVLFWERRADQREGGAAEAAHDWQILSPVRAGAPG 919 Query: 681 LTLRD---AQGETQVVRISSLDSSWSLFRPE-KMPVADGERLRVTGKIPGLR-------- 728 + + + VR +L + +P + G+++ R Sbjct: 920 VEAINLAIQRRFRNKVRERALTPNAKYPKPAGPQGILWGDKVINLRNNGRRRTYPRQEKP 979 Query: 729 -VSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSAT 787 V+ GD V + P E S + G + A Sbjct: 980 YVANGDIGIVVGGYKRGKMKFRPRDLE--VEFASQPGVKFTYYAGEFSGEEGTPELELAY 1037 Query: 788 VFASVTQMAMDNA-TLNGLARSGR---DVRLYSSLDETRTAEKLARHPSFTVVSEQIKTR 843 T L R R LY++L + L + Sbjct: 1038 ALTIHKTQGSQFERTFVVLPRHCRPLSRELLYTALTRHQEELNLLHEDDIGALRRYSDPS 1097 Query: 844 AGETSLE-TAISHQKSALHTPAQQAIHLALPVVESK----KLAFSMVDLLTEAKSFAAEG 898 A E + T + + + + + S +L A+ G Sbjct: 1098 ASEIARRMTDLFDAPGPVEVKTVSGPRFLDKHLLHRTSRGEFVRSKSELAI-AEKLNGMG 1156 Query: 899 TGFT-ELGGEINAQIKRGDLLYVDVAKGYGTGL----LVSRASYEAEKSILRHILEGKEA 953 G+ E +++ + + D D G ++S Y A I R Sbjct: 1157 IGYVYEQPLQLDGKTRWPDFTITDEDSGITYYWEHLGMLSDPQYAARWQIKRSAYLAAG- 1215 Query: 954 VMPLMERVPGELMEK 968 + P+ E+ G+++ + Sbjct: 1216 IRPIGEQADGDVLIE 1230 >UniRef50_A1SFN3 ATP-dependent exoDNAse (Exonuclease V) alpha subunit-helicase superfamily I member-like n=2 Tax=Nocardioides sp. JS614 RepID=A1SFN3_NOCSJ Length = 872 Score = 151 bits (382), Expect = 2e-34, Method: Composition-based stats. Identities = 146/918 (15%), Positives = 255/918 (27%), Gaps = 131/918 (14%) Query: 10 AGSAGNYY-----TDKDNYYVLGSMG--ERWAGRGAEQLGLQGSVDKDVFTRLLEGRLPD 62 A A Y + D+YY+ G ER A G GS+D D + + + G D Sbjct: 11 AAKAARAYVERDCSRADDYYLGEGTGVAERLTATPAGVAG-AGSMDGDEYEQWVAGIDID 69 Query: 63 GADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGD--KRLIDAHNQAVDFAVRQVEAL 120 ++T + PK+ S+ A L + + L A ++A + V + Sbjct: 70 TGCKKGRVREDANALRFVEVTVNGPKTWSLAAALHPEVSEALDGAQDRAAEQIVGWLALH 129 Query: 121 ASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDKV 180 A+TRV G+ V + A+ H TSR +P H H V G W+ L S V Sbjct: 130 ATTRVGPRGRQVQVPVERIEAAVIRHYTSRAGDPHRHLHLQVNARVFAAGAWRGLHSVGV 189 Query: 181 GKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP--VEAFSGRS 238 N + + + + A G+ + E+ + V AFS R+ Sbjct: 190 RDMIEAINGIGHAAVATDP---EFRAVLAARGFTLDPE----TGEIEQLAPYVGAFSART 242 Query: 239 QTI------------REAVGEDASLKSRDV----AALDTRKSK-QHVDPEIKMAEWMQTL 281 I RE GE+ + R+ A D R K +A W L Sbjct: 243 SQIHRNIDRYEAEWRREHPGEEPGPRLREAWDRRAWADARPDKVVPTGGADLVARWNDEL 302 Query: 282 KETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLA 341 + G+ R D A ++ L ++ + D+ Sbjct: 303 RALGY-----------RDPAAPAVLETTQVGRIDRDGAAEWVVSQLGAKRSAWNTADIRG 351 Query: 342 RTVGILPPENGVI----------ERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELS 391 + +L N V + + L TS V E Sbjct: 352 KVELLLAQTNLVTTPAARIELAEDVTARAAARCVRLLATPDLPEHVRSLTSQQVVNVEAD 411 Query: 392 VR-ALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVA 450 V L+R K R + + R AV L +V G G AG+ + Sbjct: 412 VVGRLARRAEKPARRVRLQGRGLVRVDPTQAAVVGALAGDGQLVVVEGAAG-AGKTTALR 470 Query: 451 ELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQL----------------- 493 + G + ++ ++ + G Sbjct: 471 ATRELLARHGHRLVVVTPTLKAAEVAAAETGADGRSAAWLIHQHGWRWDADGHWARRPDT 530 Query: 494 --LEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMK 551 PG +++D+ L LL A +V + + + Sbjct: 531 TPDAAARLRPGDLLLIDEAGMLDQDTARALLTIADEAGARVALVGDRHQLPA------VG 584 Query: 552 DAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILT 611 GV + + + R D+AA +G A+ Sbjct: 585 RGGVLDHALAWSHPTSVVSLQKVHRFT-----DPDYAALSLRMR------TGNHPAAVF- 632 Query: 612 QAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVI 671 L +G + + R + R + Sbjct: 633 ----DALHRRGSILIHP-----------SEAERTAALA-----EAGAAGDLVLADTREHV 672 Query: 672 DRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSG 731 + A + + S R E++ V G+R+ P L V+ Sbjct: 673 ASLNAAIR--------DQRRADPARDPAESMVTARGERIGV--GDRVATRRNDPDLGVAN 722 Query: 732 GDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSA-TVFA 790 ED V+ GR +P + +E + T + ++ Sbjct: 723 RQTWTAIGFGEDGSLVLR-GRGRDRVVPT---EYANRFVELAYATTVHGAQGETVDRAHV 778 Query: 791 SVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLE 850 ++ A + R D + + A KL ++ A ++E Sbjct: 779 AIGDTTGAAAAYVAMTRGRLDNTAHLVAESVEDARKLWVEVFGRDRADLGPAHAKRQAIE 838 Query: 851 TAISHQKSALHTPAQQAI 868 + Q+ + Sbjct: 839 AVDRYGTQKRRLSRQETV 856 Score = 106 bits (265), Expect = 6e-21, Method: Composition-based stats. Identities = 92/530 (17%), Positives = 154/530 (29%), Gaps = 78/530 (14%) Query: 838 EQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAE 897 ++++ A+ A + + +K+ A++ D+ + + A+ Sbjct: 300 DELRALGYRDPAAPAVLETTQVGRIDRDGAAEWVVSQLGAKRSAWNTADIRGKVELLLAQ 359 Query: 898 GTGFTELGGEIN-------AQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEG 950 T I R L L S+ E ++ + Sbjct: 360 TNLVTTPAARIELAEDVTARAAARCVRLLATPDLPEHVRSLTSQQVVNVEADVVGRLARR 419 Query: 951 KEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVN 1010 E R+ G + ++ Q AA L + VV+G AG GKTT RA + Sbjct: 420 AEK-PARRVRLQGRGLVRVDPTQ-AAVVGALAGDGQLVVVEGAAGAGKTTALRATRELLA 477 Query: 1011 MLPESERPRVVGLGPTHRAVGEMR-SAGVDAQTLASFLHDTQLQQ--------RSGETPD 1061 R+V + PT +A G D ++ A +H + R TPD Sbjct: 478 R----HGHRLVVVTPTLKAAEVAAAETGADGRSAAWLIHQHGWRWDADGHWARRPDTTPD 533 Query: 1062 -----FSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPF-RLQ 1115 L L+DE+ M+ + G R GD QL A+ G Sbjct: 534 AAARLRPGDLLLIDEAGMLDQDTARALLTIADEAGARVALVGDRHQLPAVGRGGVLDHAL 593 Query: 1116 QTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHS 1175 V ++++ R T A+ + A + Sbjct: 594 AWSHPTSVVSLQKVHRFTDPDYAALSLRMRTGNHPA-----------------------A 630 Query: 1176 VTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNE 1235 V + H + + L + A L++ E Sbjct: 631 VFDALHRRGSILIHPSEAERTAALAEAGAAGD--------------------LVLADTRE 670 Query: 1236 DRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYH 1295 LN+ I D R + MV R G R++T D V Sbjct: 671 HVASLNAAIRDQRRADPARDPAESMVT---ARGERIGVGDRVATRRNDPDLGVANRQT-W 726 Query: 1296 RIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRM 1345 G +D L+ G R++ P E V L T+ G+ + Sbjct: 727 TAIGFGEDGSLVL--RGRGRDRVV-PTEYANRFVELAYATTVHGAQGETV 773 Score = 77.2 bits (188), Expect = 6e-12, Method: Composition-based stats. Identities = 88/486 (18%), Positives = 146/486 (30%), Gaps = 68/486 (13%) Query: 1000 TQFRAVMSAVNMLPESERPRVVGLGPTH----RAVGEMRSAGVDAQTLASFLHDTQLQQR 1055 +Q A SA N + + L T+ A + V A+ A + Sbjct: 335 SQLGAKRSAWNT-ADIRGKVELLLAQTNLVTTPAARIELAEDVTARAAARCVRLLATPDL 393 Query: 1056 SGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASG------DTDQLQAIAP- 1108 ++ + E+ +VG R R G D Q + Sbjct: 394 PEHVRSLTSQQVVNVEADVVG-----RLARRAEKPARRVRLQGRGLVRVDPTQAAVVGAL 448 Query: 1109 ---GQPFRLQQTRSAADVAIMKEIV----RQTPELREAVYSLINRDVERALSGLESVKPS 1161 GQ ++ A ++ R L +L +V A +G + + Sbjct: 449 AGDGQLVVVEGAAGAGKTTALRATRELLARHGHRLVVVTPTLKAAEVAAAETGADGRSAA 508 Query: 1162 QVPRQEG-AWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRT 1220 + Q G W + + +A + D L + R Sbjct: 509 WLIHQHGWRWDADGHWARRPDTT----PDAAARLRPGDLLLIDEAGMLDQDTARALLTIA 564 Query: 1221 PEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTAN-IRDGELRRLST 1279 EA + +V DR L ++ V L + D + LS Sbjct: 565 DEAGARVALV----GDRHQLPAVGRGGVLDHALAWSHPTSVVSLQKVHRFTDPDYAALSL 620 Query: 1280 WETHRDALVLVDNVYHRIAGI-------------------------SKDDGLITLQDAEG 1314 + V + HR I + + +L A Sbjct: 621 RMRTGNHPAAVFDALHRRGSILIHPSEAERTAALAEAGAAGDLVLADTREHVASLNAAIR 680 Query: 1315 NTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTL 1374 + R P AE + + R+G GDR+ ++D + G WT D + Sbjct: 681 DQRRADPARDPAESMVTARGE--RIGVGDRVATRRNDPDLGVANRQTWTAIGFGEDGSLV 738 Query: 1375 SDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYV 1434 G+ + P E A + ++LAYA T HGAQG + A G G +AYV Sbjct: 739 LRGRGRDRVVPT-EYANRFVELAYATTVHGAQGETVDRAHVAIGD------TTGAAAAYV 791 Query: 1435 ALSRMK 1440 A++R + Sbjct: 792 AMTRGR 797 >UniRef50_A3ZSA6 Possible Viral (Superfamily 1) RNA helicase n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZSA6_9PLAN Length = 1276 Score = 151 bits (382), Expect = 2e-34, Method: Composition-based stats. Identities = 135/747 (18%), Positives = 237/747 (31%), Gaps = 126/747 (16%) Query: 810 RDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIH 869 R +R + + A+ V ++ AG+ + A + L T A++ Sbjct: 505 RRLRALTIRNLEDAAQNGDTLRQRADVIRDLRRHAGDDDEQKA--QVTADLMTVAEE--- 559 Query: 870 LALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTG 929 +L + ++ A AA ++ GDL+ V Sbjct: 560 ---------ELFKDEIRIVKMADDRAA---------YQLERLGAAGDLIRRTVENRIDGK 601 Query: 930 LLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTV 989 S + + L LE V+P V +E+L ++ A L +S RF+V Sbjct: 602 RHESTTDW---RKSLNSFLESNGVVLPG--DVGEREIEELARKEKTAALEELASS-RFSV 655 Query: 990 VQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRS----AGV---DAQT 1042 + G AG GKTT + + + E V+ L PT +A M AG+ A T Sbjct: 656 LIGRAGTGKTTLLSVLCAQPRISKEG----VLLLAPTGKARVRMEDVARKAGIKNSQAFT 711 Query: 1043 LASFLHDTQLQQRS-------GETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAV 1095 LA L + R+ G+ D ++DE SM+ MA + R + Sbjct: 712 LAQHLSQSGRYDRNTQRYLLTGKRGDPLAKTVIVDECSMLTEEMMAALIESLIKVD-RLI 770 Query: 1096 ASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGL 1155 GD QL I G+PF TR DV E + E + Sbjct: 771 FVGDYRQLPPIGAGRPFIDIVTRLQPDVFPADE------------PHVAPGYTELMIPR- 817 Query: 1156 ESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRD 1215 RQ + + + S E + Q +L G+ + + + Sbjct: 818 ---------RQGAGERDDLLLASWFGSGETSAGDDQVFEILSGKRKSETVEFVTWETPDE 868 Query: 1216 YTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGEL---GKEQVMVPVLNTANIRDG 1272 + P+ +TL NED + + + + +G + GK DG Sbjct: 869 LERKLPKVLRETLEFKAENEDWQAFSISLGGNPDDSGSIWFNGKWGKF----------DG 918 Query: 1273 ELRRLSTWETHRDALVLVDN--VYHRIAGISKDDGLI-TLQDAEGNTRLISPREAVAEGV 1329 W+ +R+ + I ++ +G + SP + E Sbjct: 919 AGVAAEAWQILSPVRQKPWGVETLNRLIHRYYKERTIEQARNFKGRRSIPSP---MGEHQ 975 Query: 1330 TLYTPDTIRVGTGDRMRFTKS------------DRERGYVANSVWTVTA--------VSG 1369 +Y GD++ ++ D++ + V Sbjct: 976 IVY---------GDKVINNRNQRMYKKRMYPTPDKDGYLANGEIGVVIGHRRTKKKSWDP 1026 Query: 1370 DSVTLSDGQQTREI-----RPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRK 1424 + + Q +E+ E ++LAYA+T H AQG+ + Sbjct: 1027 KYLEIEFSTQQGTSFKFYPSDFKEEGEASLELAYALTVHKAQGSEFKKVFLVLPRSP--- 1083 Query: 1425 LMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERL 1484 LM E Y AL+R K+ V V ++ A + + + Sbjct: 1084 LMVTRELLYTALTRQKEKVVVLLQGSATDLHRFSSERFSAAACRLTNLFGPPRPIEIKGA 1143 Query: 1485 FSTARELRDVAAGRAVLRQAGLAGGDS 1511 F R + + G V ++ + + Sbjct: 1144 FLEERLIHNTTRGELVRSKSEVIIANL 1170 Score = 60.6 bits (145), Expect = 6e-07, Method: Composition-based stats. Identities = 47/304 (15%), Positives = 93/304 (30%), Gaps = 36/304 (11%) Query: 265 KQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAI 324 K VD A ++ L++ + R AD DLR Q +T A Sbjct: 499 KTAVDTRRLRALTIRNLEDAAQNGDTLRQRADVIRDLRRHAGDDDEQKAQVTADLMTVAE 558 Query: 325 AGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGI 384 L + ++ R V + + I R +D ++ T+ Sbjct: 559 EELFKDEI---------RIVKMADDRAAYQLERLGAAGDLIRRTVENRIDGKRHESTTDW 609 Query: 385 HVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAG 444 L + + E + A+ LA R +++ G+ G G Sbjct: 610 RKSLNSF---LESNGVVLPGDVGEREIEELARKEKTAALEELASSR--FSVLIGRAG-TG 663 Query: 445 QRERVAELVMMAREQGREVQIIAADRRS---QMNMKQDERLSGELI-TGRRQLLEGMAFT 500 + ++ L R V ++A ++ ++ + + T + L + + Sbjct: 664 KTTLLSVLCAQPRISKEGVLLLAPTGKARVRMEDVARKAGIKNSQAFTLAQHLSQSGRYD 723 Query: 501 PG---------------STVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR--TGT 543 TVIVD+ L+ + L++ + + + + D Q G Sbjct: 724 RNTQRYLLTGKRGDPLAKTVIVDECSMLTEEMMAALIESLIKVDRLIFVGDYRQLPPIGA 783 Query: 544 GSAL 547 G Sbjct: 784 GRPF 787 >UniRef50_Q83YK2 Putative uncharacterized protein n=1 Tax=Bifidobacterium longum RepID=Q83YK2_BIFLO Length = 1387 Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats. Identities = 164/987 (16%), Positives = 310/987 (31%), Gaps = 174/987 (17%) Query: 52 FTRLLEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKR--LIDAH--- 106 LL+GR PD +L + N Y++ + K + + +++ GD R + A Sbjct: 80 LEMLLDGRDPDSGELLKSFRAGNVR--AYEIPLNDSKDLDVASVVYGDVREARMKAQARG 137 Query: 107 NQAVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVT 166 +AV + E L DG+ V ++ H TSR +P+LH H + N Sbjct: 138 EEAVRRFLA--ERLTVRLRCGDGRRRWVRPDEVMFVSATHFTSRAGDPELHRHLELINRV 195 Query: 167 QHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEM 226 + EW ++ S ++ +G L + + A G ++ G+ Sbjct: 196 RVGDEWYSIDSSRLFGMYENIRSVYETTVYG---DAGLCDAMAAHGMTLDMQGRVPEL-- 250 Query: 227 PGVPVEAFSGRSQTIREAVG--------------------------------------ED 248 G + FS R I + E Sbjct: 251 -GNASDVFSKRRDAINARMAELVDEWRAAHADGMRRVRDPETGDVVGMVGYGTVAEPDER 309 Query: 249 ASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGP 308 ++ R A DTR++K + + W + L+ G+DI A D A R + G Sbjct: 310 TLMRLRLQAWADTRQAKGRWNTRVDYGAWNEELRAAGYDIPAMLDGAAADPRPRAVGFGA 369 Query: 309 ASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGV-IERARAGIDEAI-- 365 + V AIA L E ++ + + + E I Sbjct: 370 DAVRRCAVA-----AIAALREMNSAWSLEQLEVAAYDQVRLTGATGTRDELQALAEGIRD 424 Query: 366 -SREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPR--------- 415 +RE + L + + L +V ++ + E + PR Sbjct: 425 RARELCVMLSEDPRARAGWVKSLTCRAVVECEDELKGRLAARGVEETASPRLDDLAERYT 484 Query: 416 -TAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQM 474 AG +AV + + LA+V G G AG+ + + RE G+ + I +++ + Sbjct: 485 LDAGQREAVETICKG-DPLAVVEGAAG-AGKTHMLNAVNDYCRENGKRLVIATPTQKAAL 542 Query: 475 NMKQDERLSGELITGR--------------------------------RQLLEGMAFTPG 502 ++ + R + + Sbjct: 543 VAGEEVGTGTGTLMRLLEAYGWRHDETNPEHPWYRVAEGQSDHRGNTYRGVPDEYRLDRD 602 Query: 503 STVIVDQGEKLSLKETLTLLDGAARHNVQV-LITDSGQRTGTGSALMAMKDAGVNTYRWQ 561 + ++VD+ + + L LL A ++ L+ D+ Q G GV Q Sbjct: 603 TFLVVDEAGMMDQDQALALLRVADETGARLTLVGDTMQLNAVG-------RGGV----MQ 651 Query: 562 GGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQ 621 E+ +++ D + R+ D+AA E E+ EL + Sbjct: 652 LAERYTGNVVAMRDVH-RFKD--PDYAAYTIRLRERT---PANAERLA------GELFDR 699 Query: 622 GVL---GLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVT-AQ 677 G++ E T+ A++ W++ + + Q + R+ R +D Sbjct: 700 GMVRHWDSDEATVNAIAAAWMEHPDTTIST-----VTNRQADEVNRAIQRLRLDAGQLGD 754 Query: 678 SHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQV 737 ++ D Q + G+ + + V+ V Sbjct: 755 ERCASMIDGQ-----------------------EIHVGDIVMTRRNDNHIGVANRQTFAV 791 Query: 738 ASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETP--GHSVSDSATVFASVTQM 795 + E + +V G+ LP + + A ++ G+ T V+ +F + + Sbjct: 792 LGIDERSGMLVGDGKR-TYRLP---AEYVAEAVQLGYASTTYGAQGVTSGHAIFYA-AEG 846 Query: 796 AMDNATLNGLARSGRDVRLY-SSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAIS 854 A L R +++ ++ + + L R + + + A +L I Sbjct: 847 ASGADAYVALTRGKTGNQVFMTAGGDEDARDTLTRIIARDKADKGL--EAAANNLREQIG 904 Query: 855 HQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKR 914 + L + + L LL A A EL EI + +R Sbjct: 905 QMAEPVDAGLNAEESSELRDL-DRWLHGRKAGLLQGADRRAWASEPLPELYAEIEREQRR 963 Query: 915 -GDLLYVDVAKGYGTGLLVSRASYEAE 940 G+L SRA + A+ Sbjct: 964 AGELSERIRDMRDQYDTARSRAEHVAD 990 Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 97/545 (17%), Positives = 154/545 (28%), Gaps = 99/545 (18%) Query: 843 RAGETSLETAISHQKSALHTPA----QQAIHL----ALPVVESKKLAFSMVDLLTEA--- 891 RA + + + A A+ A+ + A+S+ L A Sbjct: 343 RAAGYDIPAMLDGAAADPRPRAVGFGADAVRRCAVAAIAALREMNSAWSLEQLEVAAYDQ 402 Query: 892 KSFAAEGTGFTELGGEINAQIKRGD-----LLYVDVAKGYGTGLLVSRASYEAEKSILRH 946 EL R L A+ L RA E E + Sbjct: 403 VRLTGATGTRDELQALAEGIRDRARELCVMLSEDPRARAGWVKSLTCRAVVECEDELKGR 462 Query: 947 ILEG--KEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRA 1004 + +E P ++ + L +GQR A I + D VV+G AG GKT Sbjct: 463 LAARGVEETASPRLDDLAERY--TLDAGQREAVETICKG-DPLAVVEGAAGAGKTHMLN- 518 Query: 1005 VMSAVNMLPESERPRVVGLGPTHRAVGEM-RSAGVDAQTLASFLHDTQLQQRS------- 1056 AVN R+V PT +A G TL L + Sbjct: 519 ---AVNDYCRENGKRLVIATPTQKAALVAGEEVGTGTGTLMRLLEAYGWRHDETNPEHPW 575 Query: 1057 -------------------GETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVAS 1097 E +T ++DE+ M+ + G R Sbjct: 576 YRVAEGQSDHRGNTYRGVPDEYRLDRDTFLVVDEAGMMDQDQALALLRVADETGARLTLV 635 Query: 1098 GDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLES 1157 GDT QL A+ G +L + + +V M+++ R A + L Sbjct: 636 GDTMQLNAVGRGGVMQLAERYTG-NVVAMRDVHRFKDPDYAAYTIRLRERTPANAERL-- 692 Query: 1158 VKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYT 1217 A + D AI + Sbjct: 693 --------------------------------AGELFDRGMVRHWDSDEATVNAIAAAWM 720 Query: 1218 GRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRL 1277 T I T N +N I +R AG+LG E + + ++ + + Sbjct: 721 EHP-----DTTISTVTNRQADEVNRAIQRLRLDAGQLGDE----RCASMIDGQEIHVGDI 771 Query: 1278 STWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTI 1337 + + + + + + GI + G++ +G P E VAE V L T Sbjct: 772 VMTRRNDNHIGVANRQTFAVLGIDERSGMLV---GDGKRTYRLPAEYVAEAVQLGYASTT 828 Query: 1338 RVGTG 1342 G Sbjct: 829 YGAQG 833 Score = 69.9 bits (169), Expect = 8e-10, Method: Composition-based stats. Identities = 89/440 (20%), Positives = 146/440 (33%), Gaps = 53/440 (12%) Query: 1338 RVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLA 1397 + GD + ++D G + V + S L G R R E + + L Sbjct: 765 EIHVGDIVMTRRNDNHIGVANRQTFAVLGIDERSGML-VGDGKRTYRLPAEYVAEAVQLG 823 Query: 1398 YAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYT------DNRQ 1451 YA T +GAQG + AI A AYVAL+R K QV+ D R Sbjct: 824 YASTTYGAQGVTSGHAIFYAA------EGASGADAYVALTRGKTGNQVFMTAGGDEDARD 877 Query: 1452 GWTDAINNAVQ----KGTAHDVFEP-KPDREVMNAERLFSTARELRDVAAGRAVL--RQA 1504 T I + A+++ E E ++A + ELRD+ L R+A Sbjct: 878 TLTRIIARDKADKGLEAAANNLREQIGQMAEPVDAGLNAEESSELRDLDR---WLHGRKA 934 Query: 1505 GLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTT---------DDGNGLR 1555 GL G + + P P + +R + AG + + Sbjct: 935 GLLQGADRRAWASE----PLPEL-YAEIEREQRRAGELSERIRDMRDQYDTARSRAEHVA 989 Query: 1556 GFSGEGRVKGSGDAQFVALQGSRNGESLLADNMQDGVR-IARDNPDSGVVVRIAGEGRPW 1614 + + S + E +AD+ +D R + R + D +R+ P Sbjct: 990 DDYRDCLRELSDKCGAALDAAAARLERDMADDWRDVHRLLERHHEDETERLRLTDRNEPG 1049 Query: 1615 NPGAITGGRVWGDIPDNSVQPGAGNGEPVTAEVLAQRQAEEAIRRETERRADEIVRKMAE 1674 G + G R + AE + R + + R AE Sbjct: 1050 YRGFVMGRRRLAGEAAERANQSLMRYQAARAEFEDRWHIGYGEYRSSHELRAALARSRAE 1109 Query: 1675 NKPDLPDGKTEQAVREIAGQERDRAAITEREAALPEGVLREPQRVREAVREIARENLLQE 1734 P + D + +R++ + + E + PE R RV+E E Sbjct: 1110 ETPAVTDLR--DRMRDLEHEREH-----DPEISAPE---RLRARVQELGHEYEEVLRANA 1159 Query: 1735 RLQQMERDMVRDLQKEKTLG 1754 + M D+++ +TLG Sbjct: 1160 DRRSMA-----DIRQAETLG 1174 >UniRef50_UPI0000510573 TrwC relaxase n=1 Tax=Brevibacterium linens BL2 RepID=UPI0000510573 Length = 776 Score = 150 bits (379), Expect = 4e-34, Method: Composition-based stats. Identities = 94/547 (17%), Positives = 168/547 (30%), Gaps = 166/547 (30%) Query: 957 LMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESE 1016 ++E + L+ Q A++ +L + + + G AG GK+T A+ + + + Sbjct: 28 VLENWRTDDGHPLSPDQMDASKHVLSSDAGISAIIGPAGTGKSTTMGAITDTWHSVHGDQ 87 Query: 1017 RPRVVGLGPTHRAVGEMRSA-GVDAQTLASFL-----------------HDTQLQQRSGE 1058 V+GL P+ A G + GVD +A +L ++ +L G+ Sbjct: 88 --SVIGLAPSAVAAGVLGDEIGVDTDNVAKWLFESVGEGAARRAERVVNYEARLAALDGK 145 Query: 1059 TPDFS--------------------------------NTLFLLDESSMVGNTDMARAYAL 1086 D + N L ++DE+SMV T+MA Sbjct: 146 LADAAPRNRPKLIKQREALQAKLAQDYATQAQYRFHTNQLIIIDEASMVSTTNMAELSRQ 205 Query: 1087 IAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINR 1146 A G + + GD QL+A+ G + D + I R E +A + Sbjct: 206 AEAAGAKLLIVGDPAQLEAVDAGGFLGHVERH--LDHTTLNTIWRFKNEWEKAASLKLR- 262 Query: 1147 DVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPM 1206 + + A + E + + G+ + Sbjct: 263 ------------------------------SGDVDNDMAVVDEYAENGRIHGDPEAEAAD 292 Query: 1207 TLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNT 1266 T Y A D +A ++++ NE LN H ++G Sbjct: 293 TAYTAWKTD-----RDAGLSSILIASDNETVAELNQRAHTELVESG-------------D 334 Query: 1267 ANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVA 1326 +I D + R D L+ N +++D+ G Sbjct: 335 VDITDQVVLRAEVHAGVGDVLLARRNDR-------------SIRDSSGAF---------- 371 Query: 1327 EGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDS-----VTLSDGQQTR 1381 + T++ + D V D Sbjct: 372 -----------------------------VANGTRMTISTIRPDGSVEAHVQSDDDGAAP 402 Query: 1382 EIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQ 1441 I + ++L YA TAH +QG + A+ + +R+L YVA++R K+ Sbjct: 403 TIILDADYLASSVELGYATTAHRSQGVTVDTGHAVVTPKLSREL------FYVAMTRGKR 456 Query: 1442 HVQVYTD 1448 Y D Sbjct: 457 GNHAYVD 463 Score = 49.5 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 62/407 (15%), Positives = 117/407 (28%), Gaps = 54/407 (13%) Query: 467 AADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAA 526 AA R +KQ E L +L F +I+D+ +S L A Sbjct: 149 AAPRNRPKLIKQREALQAKLAQD-YATQAQYRFHTNQLIIIDEASMVSTTNMAELSRQAE 207 Query: 527 RHNVQVLITDSGQRTGTGSA--LMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLA 584 ++LI + A + + ++ + +R + Sbjct: 208 AAGAKLLIVGDPAQLEAVDAGGFLGHVERHLDHTTLNTIWRFKNEWEKAASLKLRSGDVD 267 Query: 585 GDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSR 644 D A + E E A KT GL + + + + + R Sbjct: 268 NDMAVVDEYAENGRIHGDPEAEAADTAYT---AWKTDRDAGLSSILIASDNETVAELNQR 324 Query: 645 YLRDMYRPGMVMEQWNPETRSHDRYVIDRV-TAQSHSLTLRDAQGETQVVRISSLDSSWS 703 ++ G V R+ + V A+ + ++RD+ G Sbjct: 325 AHTELVESGDVDITDQVVLRAEVHAGVGDVLLARRNDRSIRDSSG--------------- 369 Query: 704 LFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDA---MTVVVPGRAEPATLPV 760 V+ G R+ ++++ D V T+ + Sbjct: 370 -----------------------AFVANGTRMTISTIRPDGSVEAHVQSDDDGAAPTIIL 406 Query: 761 SDSPFTALKLENGWVETPGHSVSDSA-TVFASVTQMAMDNATLNGLARSGRDVRLYSSLD 819 D+ + A +E G+ T S + T A VT + R R Y +D Sbjct: 407 -DADYLASSVELGYATTAHRSQGVTVDTGHAVVTPKLSRELFYVAMTRGKRGNHAYVDID 465 Query: 820 ETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQ 866 + AE T ++ GE ++ + K+ + + Sbjct: 466 D---AENPTPDDWRTTITANALDDKGEV-IDDPSYYIKAVVARSTAE 508 >UniRef50_Q2J7P7 Putative uncharacterized protein n=1 Tax=Frankia sp. CcI3 RepID=Q2J7P7_FRASC Length = 1520 Score = 150 bits (379), Expect = 4e-34, Method: Composition-based stats. Identities = 94/546 (17%), Positives = 187/546 (34%), Gaps = 87/546 (15%) Query: 78 PGYDLTFSAPKSVSMMAMLGGD---KRLIDAHNQAVDFAVRQVEALASTRVMTDGQSETV 134 GYD+T SAPKSVS++ G + + + A + V+ + +E A T G++ Sbjct: 238 LGYDVTCSAPKSVSLLWAFGDEEIRRDVAAAMDAGVEAVLGYLERHA-TVGTVAGRNRPG 296 Query: 135 LTGNLVMALFNHDTSRDQEPQLHTHAVVANVT---QHNGEWKTLSSDK-----VGKTGFI 186 + + + H+ SR E LH H++V N T + + + ++ ++ + Sbjct: 297 V--GVAAVSYPHEVSRSDEAHLHVHSIVVNATAVPDLDEQGRPVADEQGRGRVDWRALDG 354 Query: 187 ENVYANQIAFGRLYREKLKEQV-EALGYETEVVGKHGMWEMPGVPVE---AFSGRSQTIR 242 E ++ G + L+ ++ G V ++G+ E+ P + AFS R ++ Sbjct: 355 EVFLSHVKTAGYVGAAALRHELSRRRGLAWGPV-RNGVAELAAFPAQLLAAFSTRHGEVQ 413 Query: 243 EAV------GEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAAD 296 G + A +R +K+ + + L G+ + R A Sbjct: 414 AEYAQLVADGLTPGGVTEAAAQRGSRAAKKVLADAQVRRIQHERLTAAGWTPQRVRALAA 473 Query: 297 QRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIER 356 + R G D+ AGL+E F + R V + + Sbjct: 474 PASRNRAPVDGEDLAGLCDLL----TGPAGLTEHDSTFDRR-AVVRRVAAWAADRLPADE 528 Query: 357 ARAGIDEAISREQLIPL--------DREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVH 408 D+ ++ +++ L + + ++T+ + E ++ AL R + Sbjct: 529 VDRLTDQVLADRRIVLLGHSAARARQQPEPVYTTQELLEVEDTLLALCRQGRVEAGAQPR 588 Query: 409 -------------------------------------------PEKSVPRTAGYSDAVSV 425 +A V Sbjct: 589 ILVDPATLEAHLAAAQQRPSSDGPGGVGGEDGGGQGNGGQGSGGPSGPALSAEQITLVRR 648 Query: 426 LAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGE 485 L + V G G +G+ E + L + G +V A R + ++G Sbjct: 649 LLTSGDLVRPVVGPAG-SGKTEAMRLLTRIVHAGGGQVFAAAHGGRQTEELTGRIGVAGR 707 Query: 486 LITGRRQLLEGMA-----FTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR 540 +++G LL+ + GS VIVD+ ++S ++ L A+R +++ + Sbjct: 708 VVSGWLTLLDHTEDPGRVWPAGSVVIVDEATQVSTRDAARLARYASRTGTVLILLGDPAQ 767 Query: 541 TGTGSA 546 G A Sbjct: 768 LGAVGA 773 Score = 123 bits (307), Expect = 8e-26, Method: Composition-based stats. Identities = 127/808 (15%), Positives = 229/808 (28%), Gaps = 125/808 (15%) Query: 775 VETPGHSVSDSATVFASVTQMAMDNATLNGLARSGR------------DVRLYSSLDETR 822 + + V A Q+ D T G+ + D ++ E Sbjct: 399 AQLLAAFSTRHGEVQAEYAQLVADGLTPGGVTEAAAQRGSRAAKKVLADAQVRRIQHERL 458 Query: 823 TAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAF 882 TA + + + RA ++ L PA + F Sbjct: 459 TAAGWTPQRVRALAAPASRNRAPVDG--EDLAGLCDLLTGPAG---------LTEHDSTF 507 Query: 883 SMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYV----DVAKGYGTGLLVSRASYE 938 ++ ++AA+ E+ + + ++ + A+ + ++ E Sbjct: 508 DRRAVVRRVAAWAADRLPADEVDRLTDQVLADRRIVLLGHSAARARQQPEPVYTTQELLE 567 Query: 939 AEKSILRHILEGK----------------EAVMPLMERVPGELMEK-------------- 968 E ++L +G+ EA + ++ P Sbjct: 568 VEDTLLALCRQGRVEAGAQPRILVDPATLEAHLAAAQQRPSSDGPGGVGGEDGGGQGNGG 627 Query: 969 ----------LTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERP 1018 L++ Q R +L + D V G AG GKT M + + + Sbjct: 628 QGSGGPSGPALSAEQITLVRRLLTSGDLVRPVVGPAGSGKT----EAMRLLTRIVHAGGG 683 Query: 1019 RVVGLGPTHRAVGEMRSA-GVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGN 1077 +V R E+ GV + ++ +L + G + ++ ++DE++ V Sbjct: 684 QVFAAAHGGRQTEELTGRIGVAGRVVSGWLTLLDHTEDPGRV-WPAGSVVIVDEATQVST 742 Query: 1078 TDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPE-- 1135 D AR + G + GD QL A+ G + + DV + + RQT Sbjct: 743 RDAARLARYASRTGTVLILLGDPAQLGAVGAGGWYAHLVAST-PDVPALGSLHRQTGAAL 801 Query: 1136 --LREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQK 1193 +R A+ +L A LE + R + + E + Sbjct: 802 APVRAALGALRAEGGASARKALELLAADGRIRLFDSREALLAQVVNDWYTERTAPHPRGA 861 Query: 1194 AMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDR-RVLNSMIHDVREKAG 1252 P +T P R V ++ DV A Sbjct: 862 TDPDSATDPGSVDGAGSTEGDGWTAAGPGRRRSGGTVRPRPAAALHMMAERTRDVEILAR 921 Query: 1253 ELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDA 1312 L + +AG +D Sbjct: 922 AARDRLAADGTLTGPVLT--------------------------VAG----------RDF 945 Query: 1313 EGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSV 1372 + +I+ + + P + + TG R T + + TV SV Sbjct: 946 QAGDEVITLTQTGHTLIPAGKPASAYIRTGTLGRVTAVHLDPDHPDRQALTVRFPRKGSV 1005 Query: 1373 TLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESA 1432 + T G+ + AYAITA A+G+S A A+ + +R + Sbjct: 1006 RVPWEYLTHRFTDGRT---GGLGYAYAITAAKAEGSSLPTARAVAPDDTSRAGL------ 1056 Query: 1433 YVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAE-RLFSTAREL 1491 YV LSR + + Y R ++ D P A+ R A E Sbjct: 1057 YVMLSRARTDLAAYVIRRADLEADLDEEDWLPVLRDPTGPLERFADHLAQSRTERLASEY 1116 Query: 1492 RDVAAGRAVLRQAGLAGGDSPARFIAPG 1519 +A LR+ G + P Sbjct: 1117 DPLAHAAHRLRRTHTLAGLARLPAPPPS 1144 >UniRef50_C5SD04 Helicase, RecD/TraA family n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SD04_CHRVI Length = 694 Score = 150 bits (379), Expect = 4e-34, Method: Composition-based stats. Identities = 77/345 (22%), Positives = 130/345 (37%), Gaps = 28/345 (8%) Query: 809 GRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAI 868 R VR+Y + E E++ +P + SL + + +L AQ + Sbjct: 165 ARAVRIYKTYGEDSV-ERVRENPYRLALDIHGIGFKTADSLAERLGIPRDSLMR-AQAGV 222 Query: 869 HLALPVVESK-KLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYG 927 AL + A L+ +A A + I+A++ L+ + Sbjct: 223 RHALQEIAGNGHCAAWRETLIEQAT--ALLEIPAPLIEQAIDAELDAERLIAESITARAA 280 Query: 928 TGLLVSRASYEAEKSILRHILEGKEAVMPLM--------ERVPGELMEKLTSGQRAATRM 979 L AE + RH+ + P V +L+ QRAA Sbjct: 281 ---LFLTPLQRAELGVARHVARLQPGDPPWGRIQTDRAWPWVEERTGLQLSDSQRAAIAR 337 Query: 980 ILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM-RSAGV 1038 +L + ++ G GVGKTT +++ +L +++ RV PT RA + S G Sbjct: 338 VLAA--KVAILTGGPGVGKTTVVNSLL----LLLQAKHTRVRLCAPTGRAAKRLSESTGR 391 Query: 1039 DAQTLASFLH---DTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAV 1095 +A+T+ L +T + + + P L ++DE SMV + M + + G + Sbjct: 392 EARTIHRLLEFDPETFGFKHTADNPLDL-DLLVVDEVSMVDVSLMNQLLRAVPDHAG-VL 449 Query: 1096 ASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAV 1140 GD DQL ++ PG A A + +I RQ R V Sbjct: 450 LVGDVDQLPSVGPGAVLADLIASGAVVTARLTDIFRQAEASRIVV 494 Score = 74.9 bits (182), Expect = 3e-11, Method: Composition-based stats. Identities = 86/563 (15%), Positives = 171/563 (30%), Gaps = 63/563 (11%) Query: 239 QTIREAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQR 298 + I + +R V T + ++ + L G + A++ Sbjct: 151 RAIMVFLQSHGIGTARAVRIYKT--YGEDSVERVRENPYRLALDIHGIGFKTADSLAERL 208 Query: 299 ADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERAR 358 R + +Q+ + + ++ + +L +IE+ Sbjct: 209 GIPRDSLMRAQAGVRHALQEIAGNG--HCAAWRET-----LIEQATALLEIPAPLIEQ-- 259 Query: 359 AGIDEAISREQLIP--LDREKGLF-----TSGIHVLDELSVRA-----LSRDIMKQNRVT 406 ID + E+LI + LF + + V ++ R + Sbjct: 260 -AIDAELDAERLIAESITARAALFLTPLQRAELGVARHVARLQPGDPPWGRIQTDRAWPW 318 Query: 407 VHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQII 466 V + + A++ + +AI++G G G+ V L+++ + + V++ Sbjct: 319 VEERTGLQLSDSQRAAIARVL--AAKVAILTG-GPGVGKTTVVNSLLLLLQAKHTRVRLC 375 Query: 467 AADRRSQMNMKQDERLSGELITGRRQLL-EGMAFTPGS-------TVIVDQGEKLSLKET 518 A R+ + + I + E F + ++VD+ + + Sbjct: 376 APTGRAAKRLSESTGREARTIHRLLEFDPETFGFKHTADNPLDLDLLVVDEVSMVDVSLM 435 Query: 519 LTLLDGAARHNVQVLITDSGQ--RTGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDR 576 LL H +L+ D Q G G+ L + +G R A Sbjct: 436 NQLLRAVPDHAGVLLVGDVDQLPSVGPGAVLADLIASGAVVTARLTDIFRQAEASRIVVN 495 Query: 577 NVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSP 636 R AG F + V + +LT R L G L AL+P Sbjct: 496 AHRIN--AGQFPEDPDPER---FGLDPVADIQVLTPMNRGGL---GARALNGALQAALNP 547 Query: 637 VWLDSRSRYLRDMYRPGM----VMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQV 692 R Y PG ++ ++ E + D + + + + D +G T V Sbjct: 548 TTQPRLER-FGWTYAPGDKVIQLVNDYDKEVFNGDIGRVVSIDLEEGEVV-IDFEGRTVV 605 Query: 693 VRISSLDS------------SWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASV 740 LD+ S + +P+A + + V+ G RL V Sbjct: 606 YETGELDALALAYATSIHKSQGSEYPAVVIPLATQHYTLLQRNLLYTAVTRGRRLVVLIA 665 Query: 741 SEDAMTVVVPGRAEPATLPVSDS 763 A+ + V + + Sbjct: 666 QPRALAMAVKQTGAGRLTKLRER 688 Score = 52.9 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 44/114 (38%), Gaps = 7/114 (6%) Query: 1340 GTGDRMRFTKSDRERGYVANSVWTVTAVS--GDSVTLSDGQQTREIRPGQEQAEQHIDLA 1397 GD++ +D ++ + V ++ V + +T G+ A + LA Sbjct: 561 APGDKVIQLVNDYDKEVFNGDIGRVVSIDLEEGEVVIDFEGRTVVYETGELDA---LALA 617 Query: 1398 YAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQ 1451 YA + H +QG+ + T+ + Y A++R ++ V + R Sbjct: 618 YATSIHKSQGSEYPAVVIPLATQ--HYTLLQRNLLYTAVTRGRRLVVLIAQPRA 669 >UniRef50_Q58IP1 Putative uncharacterized protein n=1 Tax=Streptomyces sp. FQ1 RepID=Q58IP1_9ACTO Length = 1430 Score = 150 bits (379), Expect = 4e-34, Method: Composition-based stats. Identities = 190/1271 (14%), Positives = 374/1271 (29%), Gaps = 161/1271 (12%) Query: 79 GYDLTFSAPKSVSMMAMLGGDK---RLIDAHNQAVDFAVRQVEALASTRV----MTDGQS 131 GYD+T K+ S L G++ L + + +E A+ + + Sbjct: 192 GYDVTLDLSKTYSAAVALAGEEMSEALRETFLEVARETFGAMEGWAAYAMAGEHGNGKTA 251 Query: 132 ETVLTGNLVMALFNHDTSRD-----QEPQLHTHAVVANVT-QHNGEWKTLSSDKVGKTGF 185 + V T + + H ++R +P LH H +AN+ +G+W+T+ + Sbjct: 252 DRVDTSGFLGWMTVHYSARPVGGEVGDPHLHVHGNLANMALAADGKWRTVGAGG------ 305 Query: 186 IENVYANQIAFGRLYREKLKEQV-EALGYETEVVGKHGMWEMPGVPV---EAFSGRSQTI 241 ++ + A + +L++ E G E + G WE+ G+ FS R+ I Sbjct: 306 -RDILRHAHAADAFVKARLRQVTGERFGMRWERHAETGAWEVVGIDEGLRRHFSRRNAQI 364 Query: 242 REAVGEDASLKSRDVAALDTRKSKQ-HVDPEIKMAEWMQTLKETGFDIRAYRDAA----- 295 A +DA+ + + A + K + A W +E D+ A A Sbjct: 365 VAAAADDATTGEQKLIARQLAEGKDTTITRADVRAAWRARAEEVVDDVDAMIRRAIPGPE 424 Query: 296 -DQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVI 354 + GP ++ + + GL+E + T DVLA + P + Sbjct: 425 GPDGPSVAGPGGGPVMPFPEEIAAFIWRREGGLTESRKSVTRADVLAHVIDACPFGVPDL 484 Query: 355 ERARAGIDEAIS-REQLIPLDREK-------GLFTSGIHVLDELSVRALSRDIMKQNRV- 405 A A D ++ + + L +T + E ++ + + + Sbjct: 485 AAAEALTDAVLAVDGEAVALPSGGMTHLTNPQRYTHASILAAEQTIAGSVAERLNEGAAQ 544 Query: 406 -----------------TVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRER 448 T P + + A + ++ G+ G G+ Sbjct: 545 LTTEAAELAITTFETARTTDPLRPFVMSDEQRAATLRFLTAGHGVDVLRGKAG-TGKTTI 603 Query: 449 VAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLE--GMAFTPGSTVI 506 ++ M G V A + ++ + ++ + + G ++ Sbjct: 604 MSAARMGWEAAGLRVAGAATAAVAASKLQAESGITSATVATWLMDIRDGGRRMADTDVLV 663 Query: 507 VDQGEKLSLKETLTLLDGAARHNVQVL-ITDSGQRTGTGSALMAMKDAGVNTYRWQGGEQ 565 +++ + ++ LL AA H V+V+ I D Q G G Sbjct: 664 LEEAAMVDDRDVADLLTAAAEHGVKVVQIGDWAQLKAIG------VGGGFKRAHEIVDGL 717 Query: 566 RPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLG 625 + + D R A A + G + + + A+R Sbjct: 718 ELSENRRQKDAVERAALEA-----WLDGGRRTALSMLAEHGR---VHAVR---------- 759 Query: 626 LPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRD 685 P+ A+ W D+ R G V +Q D V+ A L L Sbjct: 760 TPDEAYAAMLGAWKDTVDR------LEGDVHDQI------EDLVVLAARNADVEVLNLGA 807 Query: 686 AQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLR------VSGGDRLQVAS 739 + + ++ +++L E++ +A G+ +R+ R V G R QV Sbjct: 808 RELRKKAGELTG-GHTFALAGGERLELAAGDVIRIKRNDYRTRRGGDVDVLNGYRGQVTY 866 Query: 740 VSEDAMTVV-----VPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQ 794 S+ + V G ++ L++G+ T + + Sbjct: 867 ASKGGVAVEWRRPADDGGYAIERAWITADQIADGALQHGYAMTIAAAQGLTCDYTLVYGV 926 Query: 795 MAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAG------ETS 848 A N+ L+R L+ D + E R E + E Sbjct: 927 GADANSLYPALSRDRIATHLWLPADVVESDETRRRLGEAQSDQELLDRAVAAYADSLERD 986 Query: 849 LETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEI 908 + + + A A A+ + V + + + + + Sbjct: 987 NDDRMVSDELAAAPEAHPAVPIPHQVQPEHERVVDETEQHPVPEPADVTEQHSAAVREDA 1046 Query: 909 NAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEK 968 G + + A+ A +E E S + + L ER+ G+ + Sbjct: 1047 GDDGTEGARAHPEAAQEAAQAA----AEHEVEPSAEDRAAARQAQLGVLRERLQGDGAPE 1102 Query: 969 LTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHR 1028 LT Q+A +L G T++ VG T R Sbjct: 1103 LTGEQKARLEKLLA-------------AGFTSRAEQQPEPEFEAWRDRPYGHVG---TQR 1146 Query: 1029 AVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIA 1088 + A+ D Q + + ++A Sbjct: 1147 LTSLIAERTAQARRAERLAADLARQAEAKREALAAPVT-----PGQERAREVAEVLDRAD 1201 Query: 1089 AGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDV 1148 AV R+ + R+ + +E++RQ E + + Sbjct: 1202 QLAQNAV---------------AERVAEQRAREALRHAQEVLRQLEEAKTKSRLALRLAG 1246 Query: 1149 ERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTL 1208 L ++ R+ A+ + + + + G Sbjct: 1247 TSRKETL-ALAAEYDQRETAAYREILRANRAAETAHREAWATIRSPETVGWFEQQGSRRE 1305 Query: 1209 YEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTAN 1268 + V + R E RE+ + +R N + + G+ Q L A Sbjct: 1306 APSTVEELQTRLAEMRERLPDI-----ERITNNGVARAAANAERQAGEHQKEATRLTAAA 1360 Query: 1269 IRDGELRRLST 1279 + E + L T Sbjct: 1361 AKLQEEKALRT 1371 Score = 139 bits (350), Expect = 9e-31, Method: Composition-based stats. Identities = 166/914 (18%), Positives = 274/914 (29%), Gaps = 184/914 (20%) Query: 875 VESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTG----- 929 + + + + D+L G + + D V + G T Sbjct: 457 LTESRKSVTRADVLAHVIDACPFGVPDLAAAEALTDAVLAVDGEAVALPSGGMTHLTNPQ 516 Query: 930 LLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEK---------------LTSGQR 974 + AE++I + E + EL ++ QR Sbjct: 517 RYTHASILAAEQTIAGSVAERLNEGAAQLTTEAAELAITTFETARTTDPLRPFVMSDEQR 576 Query: 975 AATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMR 1034 AAT L V++G AG GKTT +MSA M E+ RV G A +++ Sbjct: 577 AATLRFLTAGHGVDVLRGKAGTGKTT----IMSAARMGWEAAGLRVAGAATAAVAASKLQ 632 Query: 1035 -SAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGR 1093 +G+ + T+A++L D R G + +L+E++MV + D+A A G + Sbjct: 633 AESGITSATVATWLMDI----RDGGRRMADTDVLVLEEAAMVDDRDVADLLTAAAEHGVK 688 Query: 1094 AVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSL-INRDVERAL 1152 V GD QL+AI G F+ + D + E RQ + A ++ AL Sbjct: 689 VVQIGDWAQLKAIGVGGGFK--RAHEIVDGLELSENRRQKDAVERAALEAWLDGGRRTAL 746 Query: 1153 SGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAI 1212 S L H+V + A L + D Sbjct: 747 SML------------AEHGRVHAVRTPDEAYAAMLGAWKDTVDRLEGDVHDQI------- 787 Query: 1213 VRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDG 1272 E +++ N D VLN ++R+KAGEL + G Sbjct: 788 ------------EDLVVLAARNADVEVLNLGARELRKKAGELTGGHTF-------ALAGG 828 Query: 1273 ELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLY 1332 E L+ D + + N Y G D L G S Sbjct: 829 ERLELAA----GDVIRIKRNDYRTRRGGDVD----VLNGYRGQVTYASKG---------- 870 Query: 1333 TPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQ 1392 G + + + + GY W ++ D + A+ Sbjct: 871 ---------GVAVEWRRPADDGGYAIERAW----ITADQI-----------------ADG 900 Query: 1393 HIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQG 1452 + YA+T AQG + + + + A S Y ALSR + Sbjct: 901 ALQHGYAMTIAAAQGLTCDYTLVY-------GVGADANSLYPALSRDR------------ 941 Query: 1453 WTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSP 1512 A ++ P E R A+ +++ L + Sbjct: 942 ------------IATHLWLPADVVESDETRRRLGEAQSDQELLDRAVAAYADSLERDNDD 989 Query: 1513 ARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGEGRVKGSGDAQFV 1572 P+ + A+P + ++ + + DA Sbjct: 990 RMVSDELAAAPEAHPAVPIPHQVQPEHERVVDETEQHPVPEPADVTEQHSAAVREDAGDD 1049 Query: 1573 ALQGSR-----------NGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPGA--- 1618 +G+R + + AR + R+ G+G P G Sbjct: 1050 GTEGARAHPEAAQEAAQAAAEHEVEPSAEDRAAARQAQLGVLRERLQGDGAPELTGEQKA 1109 Query: 1619 ---------ITGGRVWGDIPDNSVQPGAGNGEPVTAEVLAQRQAEEAIRRETERRADEIV 1669 T P+ G T + + A R ER A ++ Sbjct: 1110 RLEKLLAAGFTSRAEQQPEPEFEAWRDRPYGHVGTQRLTSLIAERTAQARRAERLAADLA 1169 Query: 1670 RKMAENKPDLPDGKT--EQAVREIAGQERDRAAITEREAALPEGVLREPQRVREAVREIA 1727 R+ + L T ++ RE+A + DRA + A QR REA+R Sbjct: 1170 RQAEAKREALAAPVTPGQERAREVA-EVLDRADQLAQNAVAERVA---EQRAREALR--- 1222 Query: 1728 RENLLQERLQQMER 1741 QE L+Q+E Sbjct: 1223 ---HAQEVLRQLEE 1233 >UniRef50_A9KS02 Helicase, RecD/TraA family n=32 Tax=Bacteria RepID=A9KS02_CLOPH Length = 742 Score = 150 bits (378), Expect = 6e-34, Method: Composition-based stats. Identities = 93/562 (16%), Positives = 176/562 (31%), Gaps = 116/562 (20%) Query: 904 LGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILE-------GKEAVMP 956 + I + L+ + + + S + Y E ++ + + V Sbjct: 250 VKRHITSLALEKKLVVKESGEEQH---VYSTSFYYMELNVANMLSDLSISYDISPAQVET 306 Query: 957 LMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESE 1016 + ++ E +L QR A + + T ++ + E+E Sbjct: 307 RLAKIEQETNLELDEMQRYAVMEAVRSGLLIITGGPG------TGKTTTINTILRFFEAE 360 Query: 1017 RPRVVGLGPTHRAVGEMRSA-GVDAQTLASFL--------HDTQLQQRSGETPDFSNTLF 1067 ++ PT RA M+ G +A T+ L D ++ E + Sbjct: 361 GMDMLLAAPTGRAAKRMKETTGYEASTIHRLLELTKGMDDKDGRMSFERNELNPLEADVI 420 Query: 1068 LLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMK 1127 ++DE SMV + M I G R + GD +QL ++ PG R A V ++K Sbjct: 421 IIDEMSMVDISLMHSLLKAI-TVGTRIILVGDVNQLPSVGPGNVLRDMIESKAFPVVMLK 479 Query: 1128 EIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKL 1187 +I RQ E V + + + + L Sbjct: 480 KIFRQASESDIIV----------------------------------NAHKINSGEHITL 505 Query: 1188 AEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDV 1247 + L +V +++ ++VRD + ++N + + Sbjct: 506 DNKSKDFFLLKRDDVNVIISVIISLVRDKMPK------------YVNASVYDIQVLTPMR 553 Query: 1248 REKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLI 1307 + + G QV+ LN ++ E D ++ V N Y G I Sbjct: 554 KGELGVERLNQVLQQYLNPSSQEKKEKEHFGGIFREGDKVMQVKNNYQIAWETKSRYG-I 612 Query: 1308 TLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAV 1367 T+ G + + V + + L+ + TV Sbjct: 613 TIDSGTG---VFNGDTGVIKEINLFAEE--------------------------LTVEFD 643 Query: 1368 SGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMA 1427 G VT P + E ++LAYA+T H +QG+ + +++ Sbjct: 644 EGRLVTY----------PFSQLEE--LELAYAVTIHKSQGSEYPAVVLPIY--SGPRMLF 689 Query: 1428 GFESAYVALSRMKQHVQVYTDN 1449 Y A++R KQ V + + Sbjct: 690 NRNLLYTAVTRAKQCVTIVGSD 711 Score = 53.7 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 52/375 (13%), Positives = 112/375 (29%), Gaps = 75/375 (20%) Query: 449 VAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGS----- 503 + ++ +G ++ + A R+ MK+ I +L +GM G Sbjct: 350 INTILRFFEAEGMDMLLAAPTGRAAKRMKETTGYEASTIHRLLELTKGMDDKDGRMSFER 409 Query: 504 ---------TVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQ--RTGTGSALMAMKD 552 +I+D+ + + +LL +L+ D Q G G+ L M + Sbjct: 410 NELNPLEADVIIIDEMSMVDISLMHSLLKAITVGTRIILVGDVNQLPSVGPGNVLRDMIE 469 Query: 553 AGVNTYRWQGGEQRPATIISEPDRNVRYARL-----------AGDFAASVKAGEESVAQV 601 + R A SE D V ++ + DF + + V Sbjct: 470 SKAFPVVMLKKIFRQA---SESDIIVNAHKINSGEHITLDNKSKDFFLLKRDDVNVIISV 526 Query: 602 SGVREQAILTQAIRSEL--------KTQGVLGLPEVTMTALSPVWLDSRSRYLRDM---- 649 + + + + + + +G LG+ + + S+ + ++ Sbjct: 527 IISLVRDKMPKYVNASVYDIQVLTPMRKGELGVERLNQVLQQYLNPSSQEKKEKEHFGGI 586 Query: 650 YRPGMVMEQWNPETR----SHDRY----------------VIDRVTAQSHSLTLRDAQGE 689 +R G + Q + + RY VI + + LT+ +G Sbjct: 587 FREGDKVMQVKNNYQIAWETKSRYGITIDSGTGVFNGDTGVIKEINLFAEELTVEFDEGR 646 Query: 690 TQVVRISSL------------DSSWSLFRPEKMPVADGERLRVTGKIPGLRVS-GGDRLQ 736 S L S S + +P+ G R+ + V+ + Sbjct: 647 LVTYPFSQLEELELAYAVTIHKSQGSEYPAVVLPIYSGPRMLFNRNLLYTAVTRAKQCVT 706 Query: 737 VASVSEDAMTVVVPG 751 + +++ Sbjct: 707 IVGSDNMVQSMIDNE 721 >UniRef50_B1I2W6 Helicase, RecD/TraA family n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I2W6_DESAP Length = 688 Score = 150 bits (377), Expect = 6e-34, Method: Composition-based stats. Identities = 59/245 (24%), Positives = 90/245 (36%), Gaps = 11/245 (4%) Query: 895 AAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAE-KSILRHILEGKEA 953 + T + ++ I +L + G L YE E ++ + + Sbjct: 230 SRSLTLLNHVEKSVSLDIVEKELSRLKGVHGSAEVSLAWAREYEEEIARDVKRLARQRFD 289 Query: 954 VMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLP 1013 V PL + + +LT Q AA + LE+ F+++ G GVGKT RAV+ A + Sbjct: 290 VPPLPRDLIRGI--ELTPDQNAAVKTALESG--FSILTGGPGVGKTQTVRAVIRAFELQN 345 Query: 1014 ESERPRVVGLGPTHRAVGEMRS-AGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDES 1072 V PT RA + G A T+ L L +LDE+ Sbjct: 346 PWGG--VFLCAPTGRAARRLSEVTGRQAHTVHKLLGLRNGHADRNRKNPLECDLLILDEA 403 Query: 1073 SMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQ 1132 SM R + R + GD DQL ++ PG R + + EI RQ Sbjct: 404 SMACLVLTKRLLEAV-PNNARILFVGDADQLPSVGPGNILRDLLDK--VPTVRLTEIFRQ 460 Query: 1133 TPELR 1137 E + Sbjct: 461 AAESQ 465 Score = 68.0 bits (164), Expect = 4e-09, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 53/137 (38%), Gaps = 7/137 (5%) Query: 1336 TIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHID 1395 GD++ TK++ ++G + + + L G + E ++ Sbjct: 550 QYVFHVGDKVIHTKNNYDKGVFNGDIGIIKKIKMQHDVLVQYSSGLVSYSGDDLRE--LE 607 Query: 1396 LAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTD 1455 A+A+T H AQG+ I T +M Y A++R ++ V + ++ Sbjct: 608 PAWAVTVHKAQGSEFKAVIIPVTTS--HYVMLHRNLIYTAVTRAREKVILV-GTKKALAI 664 Query: 1456 AI--NNAVQKGTAHDVF 1470 A+ N +Q+ TA Sbjct: 665 AVRNNKPIQRYTALSGL 681 >UniRef50_A7ABF9 Putative uncharacterized protein n=2 Tax=Bacteroidales RepID=A7ABF9_9PORP Length = 1171 Score = 150 bits (377), Expect = 6e-34, Method: Composition-based stats. Identities = 98/498 (19%), Positives = 177/498 (35%), Gaps = 74/498 (14%) Query: 971 SGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAV 1030 + Q A M R +V+ G AG GKTT +A + + + E + L PT +A Sbjct: 579 ADQVKALEMFCS--KRLSVLAGPAGTGKTTVVKAFLKSPQIKAEGT----LLLAPTGKAR 632 Query: 1031 GEMR--SAGVDAQTLASFLHDTQLQQRSGETPDFSNTL----------FLLDESSMVGNT 1078 + SA + A T+A FL TP ++DE SM+ Sbjct: 633 VRLGNMSADIQALTIAQFLTRQGFFDWDTMTPCVPEDAEKRKYCGAKNVIIDECSMLTCK 692 Query: 1079 DMARAYALIAAGG-GRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELR 1137 D + R + GD QL I PG+PF +K+ + LR Sbjct: 693 DFYVLMKALDLKNINRIILIGDPFQLPPIGPGRPFADLFN-------YLKDN--KDEYLR 743 Query: 1138 EAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLK 1197 A+ L R V R ++ +S + G ++S F + L + Sbjct: 744 SAITKL--RYVVRTINTGDSDILTLASWFSGEKPAKNSDLIFEQVAKGNLNN--DLVVYT 799 Query: 1198 GEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLN-SMIHDVREKAGELGK 1256 D+ L EAI ++ PE ++L ++ R+ + ++ ++ K Sbjct: 800 WNDENDLKDCLKEAIEKE----LPEEEGKSL----SDKIRKSIGLDDVNKALNDPSKVEK 851 Query: 1257 EQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNT 1316 QV+ PV N +++++ + ++ IS D +I L++ + Sbjct: 852 FQVLSPVKNPVWGT----FQINSYFQEWVGINKNFSIEIAPITISALDKVIQLKNERKKS 907 Query: 1317 RLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSD 1376 + + ++ G +++ TV T Sbjct: 908 T---------------SKEECQLSNGQIGFVNYANKREKKS-----TVV------FTGLP 941 Query: 1377 GQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVAL 1436 ++ ++A+ IDLAYAIT H +QG+ + + G + E Y AL Sbjct: 942 NKRFSYYSSKSDEADNTIDLAYAITIHKSQGSDFDTVLVVLPKSG---RILSRELIYTAL 998 Query: 1437 SRMKQHVQVYTDNRQGWT 1454 +R ++ + + + W Sbjct: 999 TRARKKLILLIQDNISWL 1016 >UniRef50_D0LWH5 Exodeoxyribonuclease V n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LWH5_HALO1 Length = 749 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 99/537 (18%), Positives = 162/537 (30%), Gaps = 90/537 (16%) Query: 969 LTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHR 1028 L+ Q AA R T RF V+ G G GKT ++ + L ES + PT + Sbjct: 264 LSDEQAAAVRAA--TRQRFCVISGGPGTGKTAIVVTILRTLARLGES-PESALLAAPTGK 320 Query: 1029 AVGEMRSAGVDA---------------------QTLASFLHDTQL--QQRSGETPDFSNT 1065 A M S+ A QTL L + + R E Sbjct: 321 AANRMGSSIRSALLAVPDPDPVDRQLLERASEPQTLHRLLGYVPVLDRFRQHENNPLRAR 380 Query: 1066 LFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAI 1125 ++DE+SM+ M R + + R V GD DQL ++ G R D Sbjct: 381 TVIVDEASMIDAELMERLLRAVPSET-RLVLLGDADQLPSVDAGAVLRDLVAAGTGDDGG 439 Query: 1126 MKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEA 1185 R T R V R + A + + + A + E Sbjct: 440 FA--RRLTHSYRMDVRDPAGRAILGAAQAMNRGETAL------ALPIRRAAKELQWHGIE 491 Query: 1186 KLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIH 1245 L +G P + V + + Sbjct: 492 LLDTVGATGATEGTTAPAADIAAVNDFVDHWYDK-------------------------- 525 Query: 1246 DVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHR-IAGISKDD 1304 A+ R+ T++ H DA D R + I + Sbjct: 526 -------------------RIASDREFARLSTKTFQRHDDAFTPEDAADLRALMSIYERS 566 Query: 1305 GLITL-QDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWT 1363 L+T+ + + I+ R G+ + ++D ERG Sbjct: 567 RLLTVTRRYDTGAEAINRRLHRRVITAASVDYGPDFYPGEPVMMRRNDYERGLFNGDQGV 626 Query: 1364 VTAVSGDS----VTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGT 1419 V VS + L+ + + H++LA+A+T H +QG+ + + Sbjct: 627 VVRVSENGEPQRFRLAFARGEEFAVFSLDALRMHVELAFAMTVHKSQGSEFSEVALVLPL 686 Query: 1420 EGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAH-DVFEPKPD 1475 E +A E Y ++R ++ V + AI ++ + D P PD Sbjct: 687 EA--IPLATREMLYTGVTRARRAVVLV-GAPALLRTAIAQRGERFSGLADKLAPAPD 740 >UniRef50_B2IL44 TrwC relaxase n=9 Tax=Alphaproteobacteria RepID=B2IL44_BEII9 Length = 1068 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 134/825 (16%), Positives = 249/825 (30%), Gaps = 178/825 (21%) Query: 23 YYVLGSMGERWAGRGAEQLGLQGSVDK------DVFTRLLEGRLPDGADLSRMQDGSNRH 76 YY W +D + RL EG+ D + + R Sbjct: 48 YYTGRDSRATWRPDITPAFAKAAGIDPSQMPTSEALDRLFEGKRGDNGERWSQHE---RT 104 Query: 77 RPGYDLTFSAPKSVSMMAML----GGDKRLIDAHNQAVDFAVRQVEALASTRVMTDGQSE 132 G+D TFS KSV++ A + +A ++A D A+R G E Sbjct: 105 LSGFDFTFSPHKSVTIAAEFAVTPAESAAIWNAIDRANDAAMRYAAGRLGFARRGKGGEE 164 Query: 133 TVLTGNLVMALFNHDTSR--------------------DQEPQLHTHAVVANV-TQHNGE 171 V G++ F H +R +PQ H H + N+ +G Sbjct: 165 GVDPGDVGWVSFRHHVARPTVELQDGKSGATYLVEAKTAGDPQAHIHNFLMNMVVTADGR 224 Query: 172 WKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP- 230 +L++ ++ E G ++ +L +++ LG E K + +P Sbjct: 225 VGSLNTKELTSDLTHE--------LGGYFQARLADELRRLGAEIGYDKKDEAVVLEAIPQ 276 Query: 231 --VEAFSGRSQTIREAVGEDASLKSRDVAALD--------------TRKSKQHVDPEIKM 274 V+ FS R Q + + A + D L +R +KQ D + + Sbjct: 277 KAVDTFSKRRQQVLRSAKAFAKSQGLDWDELSIERKQTILNESSVVSRYAKQ--DGKGEK 334 Query: 275 AEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSER-KVQ 333 W + G+ + A D +A A L+E K Sbjct: 335 EAWKAQAEAIGWRHETVLNGVRHEA----------LTDAERYDKAYDFAAKRLAEDFKTA 384 Query: 334 FTYTDVLARTVGILPPENGVIERARAGIDEAIS---------REQLIPL------DREKG 378 R + I R ID+ ++ + + + L D+ + Sbjct: 385 AVLNHDRLRVHAVRGLIGAGIAHGRDDIDKVVTLLEQRGLTLQGEHVALITSRMEDKVRI 444 Query: 379 LFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSV-----------PRTAGYSDAVSVLA 427 T+ I + EL+ +A + K ++ K+ P A Sbjct: 445 TNTAQIRIETELANKARAVARDKDGALSAQTVKAAINASGLDFTTEPEHGAAQRAAIHAL 504 Query: 428 QDRPSLAIVSGQGGAAGQRERVAELVMMAR------EQGREVQIIAADRRSQMNMKQD-- 479 + L +++G G +G+ + LV + GREV +A R +K Sbjct: 505 GEGGRLTLLTGVAG-SGKTTLLQPLVAAWKADTRYDAGGREVIGVATAWRQADALKDAGI 563 Query: 480 --------------ERLSGELIT-------------GRRQLLEGMAFTP--GSTVIVDQG 510 + T Q ++ P + +++D+ Sbjct: 564 DKTVALQPFLQSLGVEGQPDTTTLANAGIEKTAGVEALLQAIDKGTVKPTHNTVIVIDEV 623 Query: 511 EKLSLKETLTLLDGAARHNVQV-LITDSGQRTG--TGSALMAMKD--------AGVNTYR 559 ++ + L LL+ A + + + D Q G + +K A + T R Sbjct: 624 SQIGPRAMLKLLEVQAETGMTIKALGDREQAQSIEAGDTIEILKRVLPKEALPALLTTVR 683 Query: 560 WQGGEQRPATII------------SEPDRNVR---------YARLAGDF------AASVK 592 + R + D R ++A + + Sbjct: 684 QRTRRDRDIANLFREGKAGEALGMKIEDGTARLLGGDQDQVIGQIADLYMQRRDILRAED 743 Query: 593 AGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPV----WLDSRSRYLRD 648 + ++ A ++QAIR LK +G +G E A+ L + Sbjct: 744 PKKSITVSALTNQDAADISQAIRERLKARGEIGADEKLYKAIDQRGETYDLRIATGDKLR 803 Query: 649 MYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVV 693 +YR + + +++ V + T +D +G V Sbjct: 804 LYRRTWATIDGKGGSIGDNGDIVEVVGRSADGFTFKDKKGRIGSV 848 Score = 112 bits (279), Expect = 2e-22, Method: Composition-based stats. Identities = 81/561 (14%), Positives = 173/561 (30%), Gaps = 94/561 (16%) Query: 821 TRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKL 880 AE + + + + + A L + A L + Sbjct: 338 KAQAEAIGWRHETVLNGVRHEALTDAERYDKAYDFAAKRLAEDFKTAA--VLNHDRLRVH 395 Query: 881 AFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAE 940 A L+ + + E +G+ + + ++ + + A E Sbjct: 396 AV--RGLIGAGIAHGRDDIDKVVTLLEQRGLTLQGEHVALITSRMEDKVRITNTAQIRIE 453 Query: 941 KSILRHILEGKEAVMPLMERVPGELMEKLT-----------SGQRAATRMILETSDRFTV 989 + + + + + QRAA L R T+ Sbjct: 454 TELANKARAVARDKDGALSAQTVKAAINASGLDFTTEPEHGAAQRAAI-HALGEGGRLTL 512 Query: 990 VQGYAGVGKTTQFRAVMSAVN--MLPESERPRVVGLGPTHRAVGEMRSAGVDAQTLA--- 1044 + G AG GKTT + +++A ++ V+G+ R ++ AG+D +T+A Sbjct: 513 LTGVAGSGKTTLLQPLVAAWKADTRYDAGGREVIGVATAWRQADALKDAGID-KTVALQP 571 Query: 1045 -------------SFLHDTQLQQRSGETPDFS-----------NTLFLLDESSMVGNTDM 1080 + L + +++ +G NT+ ++DE S +G M Sbjct: 572 FLQSLGVEGQPDTTTLANAGIEKTAGVEALLQAIDKGTVKPTHNTVIVIDEVSQIGPRAM 631 Query: 1081 ARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADV--AIMKEIVRQTPELRE 1138 + + A G A GD +Q Q+I G + + + A++ + ++T R+ Sbjct: 632 LKLLEVQAETGMTIKALGDREQAQSIEAGDTIEILKRVLPKEALPALLTTVRQRTRRDRD 691 Query: 1139 AVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKG 1198 AL G + + Q+ + + M + Sbjct: 692 IANLFREGKAGEAL---------------GMKIEDGTARLLGGDQDQVIGQIADLYMQRR 736 Query: 1199 EAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQ 1258 + R + ++ + N+D ++ I + + GE+G ++ Sbjct: 737 DIL-----------------RAEDPKKSITVSALTNQDAADISQAIRERLKARGEIGADE 779 Query: 1259 VMVPVLNTANIR------DGELRRL--STWETHRDALVLVDNVYHRIAGISKDDGLITLQ 1310 + ++ G+ RL TW T + + + + + T + Sbjct: 780 KLYKAIDQRGETYDLRIATGDKLRLYRRTWATIDGKGGSIGDNGDIVEVVGRSADGFTFK 839 Query: 1311 DAEGN------TRLISPREAV 1325 D +G RLI P+ Sbjct: 840 DKKGRIGSVEMRRLIDPKTQR 860 >UniRef50_C3CUT3 Helicase, RecD/TraA n=1 Tax=Bacillus thuringiensis Bt407 RepID=C3CUT3_BACTU Length = 871 Score = 148 bits (374), Expect = 2e-33, Method: Composition-based stats. Identities = 121/780 (15%), Positives = 243/780 (31%), Gaps = 118/780 (15%) Query: 718 LRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVET 777 +R + GL+ D V M + P + A K + +E+ Sbjct: 117 VRYLRTLKGLKNRAEDIYSVFGDKSIDMLIENPEEVVSRIKGIGKKSVEAWKKQ---LES 173 Query: 778 PGHSVSDSATVFASVTQMAMDNATLNGLA------------RSGRDVRLYSSLDETRTAE 825 +S + + + + R + Y + A+ Sbjct: 174 LTNSQYTLSYLLDIGLSFEQSKSLYSEYKDDIIRLISENPYLLARKIPGYGFKKCDKIAK 233 Query: 826 KLARHPSFTVVSEQ-IKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSM 884 + ++ I E + E K L ++ + + LP SK+ + Sbjct: 234 DIHFDMLSDERIQEGIIHGLDEATKEGHCFLHKDDLIEKTREILRVTLP---SKESERLL 290 Query: 885 VDLLTEAKSFAAEGTGFTELGGEINAQIKR-----------------GDLLYVDVAKGYG 927 + + E S+ E+NA +R D+ Y + + Sbjct: 291 KETIDEKISYYFGTIQVMIPRDELNAYYERWKSARYKNEKEKCLYPLFDIPYELIEEEIE 350 Query: 928 TGLLVSRASYEAEKSILRHILEGKEAVMPLMER------------VPGELMEKLTSG--- 972 L R E ++ L +I + V + R + EL + L++ Sbjct: 351 NLLTFERIVIEQDRVYLEYIHSAEVRVAEELYRLSDTQEWKNQIDIKAELDKYLSAEGIE 410 Query: 973 ----QRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPR--VVGLGPT 1026 Q A + F V+ G AG GKT + ++ N++ +S + L PT Sbjct: 411 LEEKQEEAILTFTKRRGGFYVLNGSAGCGKTFVLKIILKIFNIVCKSNGITPYLQLLAPT 470 Query: 1027 HRAVGEMRSAGVD-AQTLASFL--HDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARA 1083 +A + + + T+ L + + P N + +LDESS + Sbjct: 471 GKAAKVAKKSTNEICLTVHRGLEFRGGEGFTFNASNPLPGN-IIVLDESSFLDVELSKDL 529 Query: 1084 YALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSL 1143 I G + GD QL +I PG + V + + RQ + S Sbjct: 530 LQAIKR-GATVIWMGDIKQLPSIGPGSVLKDIIESGVLPVVTLDVVKRQGKQ------SG 582 Query: 1144 INRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPD 1203 I ++ ++ + G E ++ + + A + + E+ + + FPD Sbjct: 583 IAKNAKKIIDG-EMIETCEDTKDSYAVFRDSPKVILKNILES---------VKRVLTFPD 632 Query: 1204 VPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPV 1263 + + + ++T I+ ++N ++ + + + V Sbjct: 633 YTLDDIQVLSP----------QKTGIL-----GTYMINLLMQEA------FNETESTVTS 671 Query: 1264 LNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPRE 1323 LN D E R S + D ++ + N ++ ++ +D+ +P + Sbjct: 672 LNKEFTVDNE--RFSLYFKEGDKVINMRNNDLKVW---YKKSYVSTEDSNVLLTQYTPNK 726 Query: 1324 AVAEGVTLYTPDTIRVGTGDRMRFTKS--DRERGYVANSVWTVTAVSGDSVTLSDGQQTR 1381 G+ I +R K D + + V DG Sbjct: 727 DAKGGIANGETGVIE-----AIRKIKEPVDNKETIKGAVPAKTKEIIRIIVKYDDGYIFY 781 Query: 1382 EIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQ 1441 + + ++ +D AYA + H +QG+ I R L Y +R ++ Sbjct: 782 DNKEKED-----LDHAYAFSIHKSQGSQWRACIMPISMLHYRMLDNSL--FYTGFTRAQE 834 >UniRef50_C8NA26 Probable exonuclease V, alpha subunit n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NA26_9GAMM Length = 606 Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 92/551 (16%), Positives = 171/551 (31%), Gaps = 39/551 (7%) Query: 927 GTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDR 986 G L +SR Y+ E + + E A E +P + L + Q+ A R L S R Sbjct: 71 GDRLWISRN-YQQEARLAAMLRERLHAADTPAEPIPA---DGLRAEQQNAIR--LARSRR 124 Query: 987 FTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA-------GVD 1039 ++ G G GKT ++ A + R+ PT +A M + + Sbjct: 125 LALINGGPGTGKTYTIARLIHAEQQA--DPKIRIALAAPTGKAAKRMEESLAAAGVQDLP 182 Query: 1040 AQTLASFLH-DTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASG 1098 AQTL L T Q R + + L ++DE+SM+ +A A A R + G Sbjct: 183 AQTLHRLLGIGTDGQARYHMSRHLPHDLIIIDEASMLSLE-LAHALIAATATDTRLILLG 241 Query: 1099 DTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESV 1158 D DQL A+ PG A + +R++ R + L+G + Sbjct: 242 DADQLAAVEPGAILHDLSHHPALQNHRIT--LRESQRFR---ADSGIGQLAAILNGDDGQ 296 Query: 1159 KPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTG 1218 ++ + E S +L A K FP V V+ Sbjct: 297 HGERLLEALAPYKKEQLPLFCRESDGLRLQTAGAKTSADSHPFPCVAGEGRGGGVKTSRS 356 Query: 1219 RTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLS 1278 D+ + + + L A ++ Sbjct: 357 DNTVTATSFDAGQPPVTDKNAGHKNLRSQNSDEKTIHWYPTPDANLYRAL--------IA 408 Query: 1279 TWETHRDALVLVDNVYHRIAGISKDDGLITL--QDAEGNTRLISPREAVAEGVTLYTPDT 1336 ++ + + L + ++ A G R+ + + + P Sbjct: 409 PYQPYLEKLQDAAANPQELLNTYDQYRILCAGHHGALGTRRINAALRQLHQRAQGADPS- 467 Query: 1337 IRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDL 1396 + G + ++D + + + L P + Sbjct: 468 LAYYHGLPLMILENDHRQQLYNGDTGICFE-DDNGLQLHLPGHEPV--PLARLNPATLTD 524 Query: 1397 AYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDA 1456 AYA++ H +QG + + + + + E Y ++R K + +Y + +A Sbjct: 525 AYALSIHKSQG--SEYPHVALALDEHAERLLSRELLYTGITRSKGRLDIYA-SADALKNA 581 Query: 1457 INNAVQKGTAH 1467 ++ T Sbjct: 582 AATPTRRHTGL 592 Score = 68.3 bits (165), Expect = 3e-09, Method: Composition-based stats. Identities = 36/219 (16%), Positives = 75/219 (34%), Gaps = 25/219 (11%) Query: 355 ERARAGIDEAISREQLIPLDREKGLFTSGIHV------LDELSVRALSRDIMKQNRVTVH 408 + RA D + L DR L G + E + A+ R+ + Sbjct: 43 DAQRAAADTLAATPLLADDDRAAPLTRRGDRLWISRNYQQEARLAAMLRERLHAADTPAE 102 Query: 409 PEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQII-- 466 P + A +A+ LA+ R I G G G+ +A L+ ++ +++I Sbjct: 103 PIPADGLRAEQQNAIR-LARSRRLALINGGPG--TGKTYTIARLIHAEQQADPKIRIALA 159 Query: 467 AADRRSQMNMKQD------ERLSGELITGRRQLLEGMAFT-------PGSTVIVDQGEKL 513 A ++ M++ + L + + + P +I+D+ L Sbjct: 160 APTGKAAKRMEESLAAAGVQDLPAQTLHRLLGIGTDGQARYHMSRHLPHDLIIIDEASML 219 Query: 514 SLKETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMKD 552 SL+ L+ A + ++++ + + D Sbjct: 220 SLELAHALI-AATATDTRLILLGDADQLAAVEPGAILHD 257 >UniRef50_C1MI09 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MI09_9CHLO Length = 1068 Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 121/683 (17%), Positives = 205/683 (30%), Gaps = 126/683 (18%) Query: 812 VRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLA 871 +R + A +L + S + ++ + + + Sbjct: 390 LRGATFHRADALAARLGK--SADDPARLAAAMLQVLNVNASSEGHVYLHWREMRDGVARL 447 Query: 872 LPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLL 931 L + L+ A A+ + A A G+ Sbjct: 448 LG--PKQAAGLQKGALVAAADELLAKKRINRIVAPAKGADEAASASDDEHDASWARYGVF 505 Query: 932 VSRASYEAE----KSILRHILEGKEAVM-PLMERVPGELMEK-----LTSGQRAATRMIL 981 + Y+AE K I R + K A P + R E+ L+ Q A + L Sbjct: 506 AA-VLYDAEAHVAKDIARRLKMQKRAPDVPRVRRWLKAAAEREGWRLLSPAQEAFLDLAL 564 Query: 982 ETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRS---AG- 1037 + +V+ G G GKT + L + +V+ PT RA + AG Sbjct: 565 --REPISVLTGGPGTGKTF----AVHIAVRLWRAMGRKVLMCAPTGRAAQRLAEIASAGR 618 Query: 1038 -----VDAQTLASFLHDTQLQQRSGETPD----------------------FSNTLFLLD 1070 V + T+ L ++ D + ++D Sbjct: 619 SMSSPVQSSTIHRLLEQRAGKRGGAGEEDDDPSDALEFAWKGKFARCKASPLDADVVVVD 678 Query: 1071 ESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIV 1130 ESSM+ A + + V GD DQL ++ PG R A + E+ Sbjct: 679 ESSMLDLPLCAALLDAVKP-DAQVVFVGDADQLPSVGPGSVLRDVLQSRAVPAVQLSEVF 737 Query: 1131 RQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEA 1190 RQ + + RA + + + +VP + A V + A Sbjct: 738 RQAEQS----------GIIRAAHSMNAGRIPEVPTRRWDDATRTIVGPGPGGGGGSSSNA 787 Query: 1191 QQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREK 1250 Q L + V + N L ++ Sbjct: 788 NQSGPLSYQTETWEGADCVWVTVPED---------------GENAYEGALAALF------ 826 Query: 1251 AGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQ 1310 +P L+ N +L+ L+ + +A S+ + + Sbjct: 827 -------DGALPALDGLNPTT-DLQVLTPFRRG-------------VASTSQLNVFL--- 862 Query: 1311 DAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGD 1370 RL P + E I GDR+ ++D + + TV AV+GD Sbjct: 863 ----QERLNPPSDGRLETKA----GEITFREGDRVLQQRNDYVKEVFNGDLGTVDAVNGD 914 Query: 1371 S---VTLSDGQQTREIRPGQEQAEQHIDL-----AYAITAHGAQGASETFAIALEGTEGN 1422 V + P +E +L A+A+T H AQG SE A+ L E + Sbjct: 915 GSVRVVFGGAAAAAALVPAREVTYSRSELRDLLPAWALTVHKAQG-SEYKAVVLCLAENH 973 Query: 1423 RKLMAGFESAYVALSRMKQHVQV 1445 R L+ E Y A SR K+ + + Sbjct: 974 RPLL-RRELVYTAASRAKEVLVI 995 >UniRef50_A4AB31 Putative uncharacterized protein n=1 Tax=Congregibacter litoralis KT71 RepID=A4AB31_9GAMM Length = 1227 Score = 147 bits (371), Expect = 4e-33, Method: Composition-based stats. Identities = 143/799 (17%), Positives = 244/799 (30%), Gaps = 102/799 (12%) Query: 778 PGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVS 837 ++SDS + D L+ + D ++ E E+ + T+VS Sbjct: 401 ASGAISDSDLLANPYLLYEADRQNLDPILFGAVDRGVF---PEKHVRERF-PLSAPTLVS 456 Query: 838 EQIKTRAGET----SLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKS 893 E + R +L AI + L + + + S+ L Sbjct: 457 EPVDPRRVRPLCILTLSEAIEEGHTLLP------VDWVIQRIRSRPLK------PECKID 504 Query: 894 FAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEA 953 G I+A + + +A+ T L++R EK + R G Sbjct: 505 HDLLAVVIESFTGFIDAVQLKNGAPALQLAEYASTKQLIARTV---EKRLKRKRTAGDFD 561 Query: 954 VMPLMERVPGE--------LMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAV 1005 L+ GE + + Q A + +V+ G AG GK+T + Sbjct: 562 WDSLVADAIGEGVPSDPVLAASENKARQEKAAALEEIYQSGISVLTGSAGTGKSTLLK-- 619 Query: 1006 MSAVNMLPESERPRVVGLGPTHRAVGEMRSA-GV--DAQTLASFL--------HDTQLQQ 1054 A+ +P E ++ L PT +A + A G+ QT+A FL + Sbjct: 620 --ALCRIPGVEESGLLLLAPTGKARVRLEQATGMFKQGQTIAQFLLKYGRYDGETGRYLW 677 Query: 1055 RSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRL 1114 S P ++DE SM+ +A + I R + GD QL I G+PF Sbjct: 678 VSAADPCRDRKTVIVDECSMLTEDQLAALLSGIKNVE-RLILVGDPQQLPPIGAGRPFVD 736 Query: 1115 QQTRSAAD------------VAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQ 1162 R D A + RQ + + L+ D L+ Sbjct: 737 IVERLRPDGESNYFPRVDAGYASLSIPRRQLSDGDKPREDLLFADYFSGGP-LDPAADEV 795 Query: 1163 VPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPE 1222 R V +S + + Q G + +I + P+ Sbjct: 796 WTRISSGSIDGLKVVSWSTPDDLQAKLVGQLVDELGLDSEEDEAGFEVSIGGVRWDKDPD 855 Query: 1223 AREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWET 1282 + + +DRR + + L +V V +N ++ R Sbjct: 856 R----VFFNNRWKDRRGAAESA-EDWQILSPLRASEVGVEAINRL-LQSRFRERAQHMAA 909 Query: 1283 HRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTG 1342 R + RI D +I ++++ V G Sbjct: 910 QRWPKIPKPMGPQRIL---WGDKVINVRNSSKRKVWPDIDSPY-------------VANG 953 Query: 1343 DR-MRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQ-EQAEQHIDLAYAI 1400 D + K + +G + +TA +G + Q E A ++LAYA+ Sbjct: 954 DIGVVVGKYQKGKGVPKHLEVELTAQTGPQYSAGSPQYKYFASEFSGEDANPPLELAYAL 1013 Query: 1401 TAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNA 1460 T H QG+ + N + E Y AL+R K V V+ ++ Sbjct: 1014 TVHKTQGSEFGTTFLII---PNPCRLLSREMLYTALTRHKDRVVVFHQGDLRDIARFSSP 1070 Query: 1461 VQKGTAHDV----FEPKPDREVMNAERLFSTARELRDVAAGRAV-----------LRQAG 1505 A + +P P + + +F A + A G V L G Sbjct: 1071 DYSEIARRLTNIFVDPDPVDIEIKSRHVFLDANRIHRTARGERVRSKSEVIIANQLHSTG 1130 Query: 1506 LAGGDSPARFIAPGRKYPQ 1524 + P I +YP Sbjct: 1131 IDYSYEPPVVINGRERYPD 1149 >UniRef50_D1A5Y8 Helicase, RecD/TraA family n=15 Tax=Bacteria RepID=D1A5Y8_THECD Length = 762 Score = 147 bits (370), Expect = 4e-33, Method: Composition-based stats. Identities = 66/387 (17%), Positives = 127/387 (32%), Gaps = 43/387 (11%) Query: 945 RHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRA 1004 R G + + ++L QR A ++ L + V+ G G GK+ R+ Sbjct: 328 RLAAFGDVDWEAALGWLARRTGQQLADEQRQAVQLALT--RKVAVLTGGPGCGKSFTVRS 385 Query: 1005 VMSAVNMLPESERPRVVGLGPTHRAVGEMRS-AGVDAQTLASFLHDTQLQQRSGETP-DF 1062 V+ L ++++ V+ + PT RA + G +A T+ L + Sbjct: 386 VVE----LAKAKKATVLLVAPTGRAAKRLAELTGHEASTVHRLLELQPGGDPKYDRDHPL 441 Query: 1063 SNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAAD 1122 L ++DE SM+ + I G + GD DQL ++ G+ R Sbjct: 442 QADLVVVDECSMLDLVLANKLVKAI-PPGAHLLLVGDVDQLPSVGAGEVLRDLLAADVIP 500 Query: 1123 VAIMKEIVRQTPELREAV-YSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSH 1181 + +I RQ + V IN AL+G Sbjct: 501 HVRLTKIFRQAQQSGIVVNAHKINAGRPPALTGFSDFFWFGCEP---------------- 544 Query: 1182 SQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLN---EDRR 1238 + E + + + + G P R ++T ++ Sbjct: 545 --------PADSGLNPAEETAKLVVDIVARRIPARFGLDP--RRDVQVLTPMHRGPAGAA 594 Query: 1239 VLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIA 1298 LN+++ + E E+ + + +LR + ++ + + + + Sbjct: 595 SLNALLQEALTPYREGVPERRHGGRVFRPGDKVTQLR--NNYDKGKAGIF--NGTVGVVT 650 Query: 1299 GISKDDGLITLQDAEGNTRLISPREAV 1325 G+S +DG +T+ E T E Sbjct: 651 GLSLEDGTLTVVTDEDETVDYDFAELD 677 Score = 62.2 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 51/136 (37%), Gaps = 8/136 (5%) Query: 1337 IRVGTGDRMRFTKSDRERG---YVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQH 1393 GD++ +++ ++G +V VT +S + TL+ E Sbjct: 619 RVFRPGDKVTQLRNNYDKGKAGIFNGTVGVVTGLSLEDGTLTVVTDEDETVDYDFAELDE 678 Query: 1394 IDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGW 1453 + AYA+T H +QG+ + M Y A++R + + V +R+ Sbjct: 679 LAHAYAVTIHRSQGSEYPAVVVPITMSA--WTMLQRNLLYTAVTRAR-KLVVLVGSRRAL 735 Query: 1454 TDAINNA--VQKGTAH 1467 A+ ++ TA Sbjct: 736 AVAVRTPGTGRRHTAL 751 Score = 59.5 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 59/342 (17%), Positives = 103/342 (30%), Gaps = 52/342 (15%) Query: 411 KSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADR 470 ++ + A LA R + G G G+ V +V +A+ + V ++A Sbjct: 347 RTGQQLADEQRQAVQLALTRKVAVLTGGPG--CGKSFTVRSVVELAKAKKATVLLVAPTG 404 Query: 471 RSQMNMKQDERLSGELITGRRQLLEGMAFTPGS-------TVIVDQGEKLSLKETLTLLD 523 R+ + + + +L G V+VD+ L L L+ Sbjct: 405 RAAKRLAELTGHEASTVHRLLELQPGGDPKYDRDHPLQADLVVVDECSMLDLVLANKLVK 464 Query: 524 GAARHNVQVLITDSGQ--RTGTGSALMAMKDAGVNTYRWQGG-----EQRPATIISEPDR 576 +L+ D Q G G L + A V + +Q + + Sbjct: 465 AIPPGAHLLLVGDVDQLPSVGAGEVLRDLLAADVIPHVRLTKIFRQAQQSGIVVNAHKIN 524 Query: 577 NVRYARLAG--DF----------AASVKAGEESVAQV-------------SGVREQAILT 611 R L G DF + A E + V R+ +LT Sbjct: 525 AGRPPALTGFSDFFWFGCEPPADSGLNPAEETAKLVVDIVARRIPARFGLDPRRDVQVLT 584 Query: 612 QAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDM-YRPGMVMEQWNPET------- 663 R G L + AL+P R +RPG + Q Sbjct: 585 PMHRG---PAGAASLNALLQEALTPYREGVPERRHGGRVFRPGDKVTQLRNNYDKGKAGI 641 Query: 664 RSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLF 705 + V+ ++ + +LT+ + ET + LD + Sbjct: 642 FNGTVGVVTGLSLEDGTLTVVTDEDETVDYDFAELDELAHAY 683 >UniRef50_C6XTP7 Exonuclease V subunit alpha n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6XTP7_PEDHD Length = 480 Score = 146 bits (369), Expect = 6e-33, Method: Composition-based stats. Identities = 95/528 (17%), Positives = 173/528 (32%), Gaps = 92/528 (17%) Query: 945 RHILEGKEAVMPLMERVPG--ELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQF 1002 I+ G A P E++ E+ E L+ G ++ +++GYAG GKTT Sbjct: 4 AAIIAGAYAFTPTAEQLDFCREMAEFLSHGL----------DNQCFILRGYAGTGKTTSV 53 Query: 1003 RAVMSAVNMLPESERPRVVGLGPTHRAVGEMRS-AGVDAQTLASFLHDTQLQQRSGETPD 1061 A++ A+ R V L PT RA M + G A T+ ++ + + + Sbjct: 54 AALVKALPQFK----YRSVLLAPTGRAAKVMSNYTGKKALTIHKKIYRKRAAVATDLSFQ 109 Query: 1062 FS-----NTLFLLDESSMV--------GNTDMARAYALIAAG-GGRAVASGDTDQLQAIA 1107 + +TLF++DE+SMV G++ + A + G V GDT QL + Sbjct: 110 LAPNLAEHTLFIVDEASMVADEWITHTGSSFLKDLMAFVYNGKNCALVFVGDTAQLPPVG 169 Query: 1108 PGQPFRLQQTRSAADV------AIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPS 1161 L + A++ +KE+VRQ Sbjct: 170 SIDSPALNKAYLASNFGKLVSAVELKEVVRQEK--------------------------- 202 Query: 1162 QVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTP 1221 + A + E K+ + + F + L E + Y Sbjct: 203 RSGILANATMLRQLINNLEAENEGKVVLPKFMTKNYKDIFRMTGLKLVEGLEYAY---GK 259 Query: 1222 EAREQTLIVTHLNEDRRVLNSMIHDVR--EKAGELGKEQVMVPVLNTANIRDGELRRLST 1279 E +L+V N+ V N I + G +Q+MV N + + E Sbjct: 260 FGIENSLVVCRSNKSANVYNQQIRARLLYREEELTGGDQIMVVRNNYFWLPENES----- 314 Query: 1280 WETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRV 1339 + + R+ + + + + AE + + + Sbjct: 315 ------TAFIANGDMARVVRVRRTEERYGFRFAEVQLEFLDFPDVGTVTCKVML------ 362 Query: 1340 GTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYA 1399 D + + +N ++ + + + + A Q I AYA Sbjct: 363 ---DTLTVEAPNLSYE-QSNKLFEELNIDYEHIKNKRERFNAIKEDPYYNALQ-IKFAYA 417 Query: 1400 ITAHGAQGASETFAIALEGTEGNRKL-MAGFESAYVALSRMKQHVQVY 1446 +T H AQG +G + + M Y ++R K+ + + Sbjct: 418 VTCHKAQGGQWDAVFVDQGYLTDEMVDMDFLRWLYTGVTRAKRELFLV 465 >UniRef50_C3CTA5 Helicase RecD/TraA n=1 Tax=Bacillus thuringiensis Bt407 RepID=C3CTA5_BACTU Length = 750 Score = 146 bits (369), Expect = 6e-33, Method: Composition-based stats. Identities = 109/694 (15%), Positives = 215/694 (30%), Gaps = 88/694 (12%) Query: 712 VADGERLRVTGKI-------PGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSP 764 V G++ TG + ++++ + V + + + R + + Sbjct: 55 VHKGDKFEGTGVVQLHKVYGYSIKLTATPTATIPQVKK-GLIDFIKKRVSRVGMKTAKKI 113 Query: 765 FTALKLE------NGW--VETPGHSVSDSATV---FASVTQMAMDNATLNGLA-RSGRDV 812 L LE + + G + + ++ + + S + Sbjct: 114 VDELGLEAISLIEKDYKVLVNIGLTEKRAKSIQNQLVEHKRFEELATFIQSFDLESSVAI 173 Query: 813 RLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLAL 872 R+Y L +T K+ +P ++ + + A+ + + AI + Sbjct: 174 RIYEDLGDTSLV-KVKGNPYVVCSISKLDFTHADK-IAYALGKPSDGVER-IKHAILFYI 230 Query: 873 PVVESKK--LAFSMVDLLTEAKSFAAE----------GTGFTELGGEINAQIKRGDLLYV 920 K + +LL + F ++ + G L+ Sbjct: 231 EHRMQSKGDICIFKDELLDSLEEFIVRVGAYPKNQMISVPIQKIDAILQGLFTSGALVTE 290 Query: 921 DVAKGYGTGLLVSRASYEA-EKSILRHILEGKEAV-MPLME--------RVPGELMEKLT 970 + G RA Y E +I+ + E + PL + + + L Sbjct: 291 ENNDGKVCIY---RADYHRIENNIVSGLKELVHSFKTPLCQKHHIDDFIQEYEKAYFPLA 347 Query: 971 SGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAV 1030 Q A M L + +++ G G GKT ++ + + ++ L PT +A Sbjct: 348 EKQAEAVYMALL--NGISILTGGPGTGKTQTTNTIVQCIKKVNPKA--TILLLAPTGKAS 403 Query: 1031 GEMRS-AGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAA 1089 M +DA T+ L + E ++ ++DE SMV + I Sbjct: 404 KRMTELTNMDASTIHRGLGLNS-FGGTKELNQLTSDFIVVDEFSMVDAYLANKLVNNIGE 462 Query: 1090 GGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVE 1149 R + GD DQL ++ PG R V + ++ RQ + I + Sbjct: 463 -NTRILFVGDVDQLPSVGPGLILRDLIDSGKIPVTKLDKVFRQAENSQ------IVMNSY 515 Query: 1150 RALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLY 1209 + + G + P + + S K+ E+ Q+ + K D L Sbjct: 516 KVIHGKTTKDPDGIRFDHTKGDEYFIQEKNSLVIRKKIIESIQRMIDKYHYKLDDICLLS 575 Query: 1210 EAIVRDYTGRTPEAREQTLIVTHLNED----RRVLN------SMIHDVREKAGELGKEQV 1259 + D G R L N R +IH K LG Sbjct: 576 PMRIGD-LGTDELNRAIQLHFNPPNSSMDYQRDEFTTFRTGDKVIHTENNKD--LGVYNG 632 Query: 1260 MVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTR-- 1317 V V+++ +GE + + D + + ++ IT+ ++G+ Sbjct: 633 EVGVVSSIYTYEGEFKVDVEYPDREDPVAYTEKDMEQLQLAYA----ITIHKSQGSEFPI 688 Query: 1318 LISPREAVAEGVT----LYTPDTIR----VGTGD 1343 +I P ++ +YT T + GD Sbjct: 689 VIMPFHESQLSMSTRNLIYTGRTRAKKILISIGD 722 Score = 64.9 bits (156), Expect = 3e-08, Method: Composition-based stats. Identities = 35/172 (20%), Positives = 68/172 (39%), Gaps = 20/172 (11%) Query: 1274 LRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYT 1333 R + + D + L+ + G + + I L +P + + Y Sbjct: 558 QRMIDKYHYKLDDICLLSPMRIGDLGTDELNRAIQLH--------FNPPNSSMD----YQ 605 Query: 1334 PDT-IRVGTGDRMRFTKSDRERGYVANSVWTVTAV---SGD-SVTLSDGQQTREIRPGQE 1388 D TGD++ T+++++ G V V+++ G+ V + + + ++ Sbjct: 606 RDEFTTFRTGDKVIHTENNKDLGVYNGEVGVVSSIYTYEGEFKVDVEYPDREDPVAYTEK 665 Query: 1389 QAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMK 1440 EQ + LAYAIT H +QG F I + ++ M+ Y +R K Sbjct: 666 DMEQ-LQLAYAITIHKSQG--SEFPIVIMPFHESQLSMSTRNLIYTGRTRAK 714 >UniRef50_D1U587 Helicase, RecD/TraA family n=2 Tax=Desulfovibrio RepID=D1U587_9DELT Length = 736 Score = 146 bits (368), Expect = 8e-33, Method: Composition-based stats. Identities = 122/796 (15%), Positives = 232/796 (29%), Gaps = 147/796 (18%) Query: 672 DRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRP--EKMPVADGERLRVTGKIPGLRV 729 R+ + ++ GE L W+ + V E+ R + +R Sbjct: 31 CRMRDEPGQFSIVGTMGELSAGSTLDLHGVWTTHPKFGRQFEVRTFEQARPATENGVIRF 90 Query: 730 SGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVF 789 + + V E T +V + D P L + G S + + Sbjct: 91 ---LQSSIKGVGEKTATRLVEAFGVAVLDLLDDDPEQLLSI-------KGISKNKLTDII 140 Query: 790 ASVTQMAMDNATLNGLARSGRDV----RLYSSLDETRTAEKLARHPSFTVVSEQIKTRAG 845 S ++ L L G +++ L + KL +P ++ +I+ Sbjct: 141 DSWSRQREIKNLLVFLQTHGVPTTFAGKIF-HLHGAQAERKLRVNPY--DLAYEIRGVGF 197 Query: 846 ETSLETAIS-HQKSALHTPAQQAIHLALPVVESKKL-AFSMVDLLTEAKSFAAEGTGFTE 903 T+ + A+ + AI AL + F D L + + + + Sbjct: 198 RTADQMAMKLGFAPDCAQRLEAAIVYALFTSCERSGHLFIPKDTLLSDVARMLDTSDYDR 257 Query: 904 LGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILE--------GKEAVM 955 L + + ++ + ++ + + + Y E I + + + ++ + Sbjct: 258 LELALYSLEEKKRVRIENLPEQGVSDAVYLMHFYHYENEITQRLYQLVSHPTPVSRKKID 317 Query: 956 PLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPES 1015 + V +L KL+ QR A T + A+ + + Sbjct: 318 KTLPLVEDKLGFKLSDEQRRAVFEACSNKVFIITGGPG------TGKTTITKAIMLTLKE 371 Query: 1016 ERPRVVGLGPTHRAVGEMRSA-GVDAQTLASFL-HDTQLQQRSGETPDFSNTLFLLDESS 1073 V PT RA M A G A T+ L + E + ++DE+S Sbjct: 372 LGLTVKQAAPTGRAAKRMTEATGHPAHTVHRLLQYQPDGGFHYCEDQKLKADVLVIDEAS 431 Query: 1074 MVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQT 1133 MV + R + GD +QL ++ PG A++ I RQ Sbjct: 432 MVDAHLFVSILRSL-PHTCRLILVGDVNQLPSVGPGNVLADLINSERVPCAVLTHIFRQA 490 Query: 1134 PELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQK 1193 E V + + Q PRQ APE AK+ Sbjct: 491 QESFIVVNAH-------------RINSGQFPRQHPCQAPEADFFWIPQEDSAKV------ 531 Query: 1194 AMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNE---DRRVLNSMIHDVREK 1250 + + + + G P R ++T +++ + LN+ + Sbjct: 532 --------QKLILDSVCERIPERYGLDP--RRDIQVLTPMHKGDVGTQALNAALQARLNP 581 Query: 1251 AGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQ 1310 G V L R+ +T+ + L +N + + D G I Sbjct: 582 PGP------HVREL---------KRKFATYRAGDRVIQLKNNYDKEV--FNGDLGWIVDV 624 Query: 1311 DAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGD 1370 D E L G+ Sbjct: 625 DTEAQELL----------------------------------------------VEFDGN 638 Query: 1371 SVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFE 1430 +V G+ + LAYA++ H +QG+ T + T+ ++ Sbjct: 639 NVQFEAGELDE------------LGLAYAVSVHKSQGSEYTAVVMPIVTQ--HYMLLQRN 684 Query: 1431 SAYVALSRMKQHVQVY 1446 Y L+R ++ + Sbjct: 685 LLYTGLTRARELAVLI 700 Score = 53.7 bits (127), Expect = 7e-05, Method: Composition-based stats. Identities = 42/299 (14%), Positives = 87/299 (29%), Gaps = 60/299 (20%) Query: 450 AELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFT-------PG 502 +++ +E G V+ A R+ M + + Q F Sbjct: 363 KAIMLTLKELGLTVKQAAPTGRAAKRMTEATGHPAHTVHRLLQYQPDGGFHYCEDQKLKA 422 Query: 503 STVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQ--RTGTGSALMAMKDA------- 553 +++D+ + +++L +L+ D Q G G+ L + ++ Sbjct: 423 DVLVIDEASMVDAHLFVSILRSLPHTCRLILVGDVNQLPSVGPGNVLADLINSERVPCAV 482 Query: 554 -------------GVNTYRWQGG----------EQRPATIISEPDRNVRYARLAGDFAAS 590 VN +R G + I + D + Sbjct: 483 LTHIFRQAQESFIVVNAHRINSGQFPRQHPCQAPEADFFWIPQEDSAKVQKLILDSVCER 542 Query: 591 VKA-----GEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRY 645 + + ++ + + + TQA+ + L+ L P + L + Sbjct: 543 IPERYGLDPRRDIQVLTPMHKGDVGTQALNAALQA--RLNPPGPHVRELKRKFAT----- 595 Query: 646 LRDMYRPGMVMEQ----WNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDS 700 YR G + Q ++ E + D I V ++ L L + G LD Sbjct: 596 ----YRAGDRVIQLKNNYDKEVFNGDLGWIVDVDTEAQEL-LVEFDGNNVQFEAGELDE 649 >UniRef50_C7IID4 Exonuclease V subunit alpha n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IID4_9CLOT Length = 819 Score = 146 bits (367), Expect = 9e-33, Method: Composition-based stats. Identities = 58/261 (22%), Positives = 99/261 (37%), Gaps = 20/261 (7%) Query: 889 TEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGL-LVSRASYEAE------- 940 ++A S A+ EL IK G L+ + + + +R ++ E Sbjct: 300 SKALSDNADKISEDELDEAYKRMIKTGLLVNITYTENEDRYEAVYTRDMHKLEYETALAI 359 Query: 941 KSILR-HILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKT 999 K+I+R V L+ +L Q+ + R + ET+ ++ G AG GKT Sbjct: 360 KNIVRCQPDISVAHVDKLIAEFEELKGFELEDMQKESVRAVFETN--MLILTGSAGSGKT 417 Query: 1000 TQFRAVMSAVNMLPES-ERPRVVGLGPTHRAVGEMRS-AGVDAQTLASFL----HDTQLQ 1053 T ++ + + E+ + + PT +A + G +A T+ L + Sbjct: 418 TTVECMIYVLQRVFENRQEMSFMLAAPTGKAAKRLTEITGFEAMTIHRLLQFSYENKGFF 477 Query: 1054 QRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFR 1113 R G + L ++DESSM+ D+A A + G V GDT QL ++ G Sbjct: 478 YRQGNELPY--DLIVIDESSMLS-IDLAHALFTAISPGTTVVMIGDTQQLPSVGAGNVLD 534 Query: 1114 LQQTRSAADVAIMKEIVRQTP 1134 + I RQ Sbjct: 535 DMIKSGVIPTVKLNVIKRQAD 555 Score = 69.9 bits (169), Expect = 9e-10, Method: Composition-based stats. Identities = 47/320 (14%), Positives = 103/320 (32%), Gaps = 27/320 (8%) Query: 279 QTLKETGFD-IRAYRDAADQRADLRTL-TPGPASQDGPDVQQAVTQAIAGLSERKVQFTY 336 + K+ G D +R A ++ L T T G + QA ++A++ +++ + Sbjct: 256 EIAKKLGIDSHSIFRMEAALKSVLETAETEGHCYLYRQQLLQATSKALSDNADKISEDEL 315 Query: 337 TDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALS 396 + R + N + +R D K + + + + + + + Sbjct: 316 DEAYKRMIKTGLLVNITYTENEDRYEAVYTR------DMHKLEYETALAIKNIVRCQPDI 369 Query: 397 RDIMKQNRVTVHPE-KSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMM 455 + E K ++V + + ++ I++G G +G+ V ++ + Sbjct: 370 SVAHVDKLIAEFEELKGFELEDMQKESVRAVFET--NMLILTGSAG-SGKTTTVECMIYV 426 Query: 456 ARE-----QGREVQIIAADRRSQMNMKQDERLSGELITGRRQLL--------EGMAFTPG 502 + Q + A ++ + + I Q P Sbjct: 427 LQRVFENRQEMSFMLAAPTGKAAKRLTEITGFEAMTIHRLLQFSYENKGFFYRQGNELPY 486 Query: 503 STVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQ--RTGTGSALMAMKDAGVNTYRW 560 +++D+ LS+ L + V+I D+ Q G G+ L M +GV Sbjct: 487 DLIVIDESSMLSIDLAHALFTAISPGTTVVMIGDTQQLPSVGAGNVLDDMIKSGVIPTVK 546 Query: 561 QGGEQRPATIISEPDRNVRY 580 +R A R Sbjct: 547 LNVIKRQADGSGIISNANRI 566 Score = 49.9 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 61/214 (28%), Gaps = 44/214 (20%) Query: 1264 LNTANIRDGELRRLSTWETHR-DALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPR 1322 L RL T H D + ++ G + + I +++P Sbjct: 590 YRVVKKTQEALNRLMTAYNHTIDDIQIICPQKSSEIGTYELNKAI--------QEMVNP- 640 Query: 1323 EAVAEGVTLYTPDTIRVGTGDRMRFTKSDRER------------------GYVANSVWTV 1364 AE GD++ ++ E G + + Sbjct: 641 --AAENKQEIKRGNSVFREGDKVIHLSNNYETPHYRREPDTGRYFAQESCGIFNGDIGRI 698 Query: 1365 TAVSG-DSVTLSDGQ-----QTREIRPGQEQAEQHI------DLAYAITAHGAQGASETF 1412 +S V D + ++ HI DLAY +T H QG+ Sbjct: 699 IEISNIKEVEAEDEDANTPEKKVAVQYDDFIIIYHINELEEIDLAYCLTVHKMQGSQCEA 758 Query: 1413 AIALEGTEGNRKLMAGFESAYVALSRMKQHVQVY 1446 AI L +M Y A++R K+ + Sbjct: 759 AIILCH--MRNYVMLNRNLGYTAVTRAKKMACII 790 >UniRef50_A4JFN0 AAA ATPase n=1 Tax=Burkholderia vietnamiensis G4 RepID=A4JFN0_BURVG Length = 858 Score = 146 bits (367), Expect = 1e-32, Method: Composition-based stats. Identities = 91/561 (16%), Positives = 165/561 (29%), Gaps = 113/561 (20%) Query: 921 DVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELME--------KLTSG 972 D G ++ S ++AE+ +L + P + + KL Sbjct: 242 DATDEQGRPMVFSADFFDAEEQCAHILLRMAKDQSPYHALDRKQALADAQEITGLKLLEQ 301 Query: 973 QRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGE 1032 Q+ A ++ E R ++ G G GKTT + V + E + V PT +A Sbjct: 302 QQQAVEVLFEG--RVAIISGKPGAGKTTLLKCVAPIL----EKDGRAVHYAAPTGKAAKR 355 Query: 1033 MRSA-GVDAQTLASFLHDTQLQQRSG---ETPDFSNTLFLLDESSMVGNTDMARAYALIA 1088 MR + T+ L + ++ E P + + ++DE+SM+ I Sbjct: 356 MRQSIERPTSTIHRMLGLGRGGAKARPDDENPLKTASAVVIDEASMLDAKLTLAILRSIG 415 Query: 1089 AGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDV 1148 V GD QL +I G+ +A A + +VRQ A ++ V Sbjct: 416 PKT-LLVLVGDPGQLPSIRAGKVLADLMDSNAFPTARLTNVVRQG-----AQSDIVK--V 467 Query: 1149 ERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTL 1208 RA+ ES + P V + + P+ Sbjct: 468 ARAIDSGESPDFTLHPDSPPERKKSDCVFLEEPNAQRLGDRIANMLRNAQVDAKMDPLRD 527 Query: 1209 YEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTAN 1268 + I G T LN+ + Sbjct: 528 AQVIAASNVGPT---------------GAVALNATLQAA--------------------- 551 Query: 1269 IRDGELRRLSTWETHRDALVLVDNVYHRIAGISK------DDGLITLQDAEGNTRLISP- 1321 + E ++ L + + G+ + D ++ + P Sbjct: 552 --------FNPPEPNKPELHVKR----TVKGVDQSFALRFGDKVMQTSNEASKALFDGPS 599 Query: 1322 -REAVAEGVTLYTPDTIRVGTGDRM-RFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQ 1379 R E ++ D + DR+ + + D + +N Sbjct: 600 DRSKPLEEKGIFNGDVGYIVAMDRVSMWVQFDNGHAHFSNDEAR---------------- 643 Query: 1380 TREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRM 1439 + + L+YA T H QG SE+ I E K + AY A++R Sbjct: 644 ------------KSLTLSYANTVHKFQG-SESPLIFFAMHESTPKPLLTRNLAYTAITRA 690 Query: 1440 KQHVQVYTDNRQGWTDAINNA 1460 + + + + +A Sbjct: 691 RTK-CIVIGSERRLNEAAGRD 710 Score = 75.3 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 89/569 (15%), Positives = 163/569 (28%), Gaps = 59/569 (10%) Query: 400 MKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQ 459 KQ + AV VL + R +AI+SG+ G AG+ + + + + Sbjct: 283 RKQALADAQEITGLKLLEQQQQAVEVLFEGR--VAIISGKPG-AGKTTLLKCVAPILEKD 339 Query: 460 GREVQIIAADRRSQMNMKQDERLSGELITGRRQL---------LEGMAFTPGSTVIVDQG 510 GR V A ++ M+Q I L + S V++D+ Sbjct: 340 GRAVHYAAPTGKAAKRMRQSIERPTSTIHRMLGLGRGGAKARPDDENPLKTASAVVIDEA 399 Query: 511 EKLSLKETLTLLDGAARHNVQVLITDSGQ--RTGTGSALMAMKD------AGVNTYRWQG 562 L K TL +L + VL+ D GQ G L + D A + QG Sbjct: 400 SMLDAKLTLAILRSIGPKTLLVLVGDPGQLPSIRAGKVLADLMDSNAFPTARLTNVVRQG 459 Query: 563 GEQRPATIISEPDRNVRYARLAGDFA---ASVKAGEESVAQVSGVREQAILTQAIRSELK 619 + + D + DF S ++S L I + L+ Sbjct: 460 AQSDIVKVARAIDSGE-----SPDFTLHPDSPPERKKSDCVFLEEPNAQRLGDRIANMLR 514 Query: 620 TQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSH 679 V + L P + + + ++ Sbjct: 515 NAQVDAKMD---------PLRDAQVIAASNVGPTGAVALNATLQAAFNPPEPNKPELHVK 565 Query: 680 SLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADG--ERLRVTGKIPGLRVSGGDRLQV 737 R +G Q + D + DG +R + + + GD + Sbjct: 566 ----RTVKGVDQSFALRFGDKVMQTSNEASKALFDGPSDR---SKPLEEKGIFNGDVGYI 618 Query: 738 ASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASV----T 793 ++ +M V +D +L L FA Sbjct: 619 VAMDRVSMWVQFDNGHA---HFSNDEARKSLTLSYANTVHKFQGSESPLIFFAMHESTPK 675 Query: 794 QMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAI 853 + N + R+ + E R E R T + +G + Sbjct: 676 PLLTRNLAYTAITRARTKCIVIG--SERRLNEAAGRDALATRHTRLKGLLSGAI---APV 730 Query: 854 SHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIK 913 S K + A +A+ AL A + ++ + A + + + A + Sbjct: 731 SAPKDVVAIFASKAVERALAPNAPGADAVRSTAPVAQSSAAPASASQVSHVVA-TEAIGQ 789 Query: 914 RGDLLYVDVAKGYGTGLLVSRASYEAEKS 942 + + G T + S + ++E++ Sbjct: 790 AANPVASQSRAGQATNAIASPDATQSERA 818 >UniRef50_Q14LX3 Putative exodeoxyribonuclease v alpha subunit protein n=1 Tax=Spiroplasma citri RepID=Q14LX3_SPICI Length = 720 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 54/218 (24%), Positives = 92/218 (42%), Gaps = 17/218 (7%) Query: 926 YGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTS--------GQRAAT 977 + + Y +E +I +L G ++ E +EKLT+ Q A Sbjct: 269 FKNDKIYVAEVYHSEINIAA-MLVGLNTTDQYDDQKLTEELEKLTNKKQIIYNMNQTKAI 327 Query: 978 RMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRS-A 1036 + + ++ F V+ G G GKTT V+S + + + ++V PT +A +R Sbjct: 328 KTAVHSN--FLVIIGGPGTGKTTVVDGVVSLLKKVYQQS--KIVLAAPTGKAAKRLREKT 383 Query: 1037 GVDAQTLASFLHDTQL--QQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRA 1094 G A T+ L L Q E N + +LDE SMV + +A+ A + + Sbjct: 384 GRKALTIHKLLKYDALTNQFFYNENNPLENDILILDEVSMVDSLLLAQI-AKASVNLRKL 442 Query: 1095 VASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQ 1132 + GD +QL ++A G R +V ++E+ RQ Sbjct: 443 ILIGDPNQLPSVACGDLLRDIIQSDVFNVIKLEEVYRQ 480 Score = 51.0 bits (120), Expect = 5e-04, Method: Composition-based stats. Identities = 26/173 (15%), Positives = 55/173 (31%), Gaps = 21/173 (12%) Query: 1278 STWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTI 1337 + +E +A+ ++ +Y+ GI+ + + + + Sbjct: 533 NQYEADYNAIQVIAPMYNGPVGINALNTYLQNRM-----------NHAVGQKEI-KIGHR 580 Query: 1338 RVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDS----VTLSDGQQTREIRPGQEQAEQH 1393 D++ K+ E V + + D V L ++ Sbjct: 581 FFRVNDKVMQLKNRPELEIYNGDVGIIIDIKKDKNLNDVILVKYDNVITY---TKELYYD 637 Query: 1394 IDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVY 1446 I LAYA + H QG+ I + + +M Y A++R K + + Sbjct: 638 ITLAYACSVHKLQGSEYDNIIFVI--TKSFWMMLKRNLIYTAITRAKTKLYLI 688 >UniRef50_A4AC13 Exodeoxyribonuclease V, alpha subunit n=1 Tax=Congregibacter litoralis KT71 RepID=A4AC13_9GAMM Length = 716 Score = 144 bits (363), Expect = 3e-32, Method: Composition-based stats. Identities = 87/494 (17%), Positives = 156/494 (31%), Gaps = 72/494 (14%) Query: 821 TRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKL 880 + EK+ +P + ++ +A+ ++ Sbjct: 177 EKAVEKIKENPYRLLPFSSWAAIDNVARAAYSMQSFDPRRLVAMTEAVLY--KHLDQGNT 234 Query: 881 AFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAE 940 A + L+ + I+ + G + + ++ Sbjct: 235 AVPINTLVAGVQKIDPLVNAHEA----IDLAVSDGTCVVHEEQAQILGCKVIEDGILNRM 290 Query: 941 KSILRHILEGKE--AVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGK 998 +L+ + + P+++ LT Q+ A + L +RF V+ G AG+GK Sbjct: 291 SRLLQTPRRNRGLFSGAPIIQSEQPIFAGNLTEEQQTAALVFL--ENRFGVLLGGAGMGK 348 Query: 999 TTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA-GVDAQTLASFLHDTQLQQRSG 1057 TT R V S LP E +V L T++A MR + G A ++A+FL Q Sbjct: 349 TTLLRYVYS---QLPAEE--VIVQLALTNKAANRMRESTGRYACSIAAFLGRADDNQLPS 403 Query: 1058 ETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQT 1117 +DE+SM+ + R + L GD QL I PG Sbjct: 404 YFS------VFVDEASMLDAIMIYRIF-LAMPEDANLYLIGDHHQLPPIGPGLILHKFAE 456 Query: 1118 RSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVT 1177 V + +++RQ+ E + A P+ VP G + Sbjct: 457 TECGFVTRLTKVMRQSEE---------SGIPGVAAEIRNQTPPNLVPFDSGLSQFNGVFS 507 Query: 1178 EFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDR 1237 + L++A+ T R + QT IV Sbjct: 508 R----------------------WCTQSQFLHDALA---TWRELKTHGQTQIVAATRSIV 542 Query: 1238 RVLNSMIH----DVREKAGELGKEQVMVPVLNTANIRDG--ELRRLSTWETHRDALVLVD 1291 +N+ +H GE + T NI+DG + + + L + Sbjct: 543 SAINTSLHIEHVQALASNGE---------SIQTINIKDGSVAVGEPVIYLRNNAQRQLFN 593 Query: 1292 NVYHRIAGISKDDG 1305 + R+ +S D+G Sbjct: 594 GLIGRVVEVSADNG 607 Score = 63.7 bits (153), Expect = 6e-08, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 56/138 (40%), Gaps = 14/138 (10%) Query: 1338 RVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDS-------VTLSDGQQTREIRPGQEQA 1390 V G+ + + +++ +R + V VS D+ V D E+ Sbjct: 573 SVAVGEPVIYLRNNAQRQLFNGLIGRVVEVSADNGAGESVMVQFDDIDSPHELASDD--- 629 Query: 1391 EQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNR 1450 Q + LAYAIT H AQG+ + + + G +A Y A++R + V ++ Sbjct: 630 LQDLSLAYAITCHKAQGSQWQYIVVVSGFSKTAPRIADNSWWYTAVTRC-EQACVIVGSK 688 Query: 1451 QGWTDAIN---NAVQKGT 1465 +G+ ++ + + T Sbjct: 689 EGFDKSVAAPPRSFARTT 706 >UniRef50_A6P2F0 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P2F0_9BACE Length = 726 Score = 144 bits (363), Expect = 3e-32, Method: Composition-based stats. Identities = 87/530 (16%), Positives = 159/530 (30%), Gaps = 65/530 (12%) Query: 874 VVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVS 933 + K AF + A + + I+ G L+ + Y +++ Sbjct: 237 HLCMHKEAFVRKAVNL----LHAPQVTWKGVAQRAFEMIQSGRLI---LYNDYVYRPIMA 289 Query: 934 RASYEAEKSILRHILEGK----EAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTV 989 RA E I + K + ++R E+ QR A R L + + Sbjct: 290 RAEEEVAAGICDMLKRDKMPYMGDLDDEIDRQQAEMGFTFAQEQRHAIRTALTSP--ICI 347 Query: 990 VQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMR-SAGVDAQTLASFLH 1048 + G G GK + RA+++ + VV PT RA M S G A T+ L+ Sbjct: 348 ISGGPGTGKASIQRAILNIYKKVFPDSD--VVCCAPTGRAARRMEQSTGYPASTIHKALN 405 Query: 1049 DTQLQQRS-GETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIA 1107 T + E L L+DE SM+ + R + GD DQL ++ Sbjct: 406 LTAGELHKLRELQLLEADLVLVDEVSMMDMVTTWCLFN-ALPPNCRLILVGDADQLPSVG 464 Query: 1108 PGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQE 1167 PG I+ ++ RQ+ A E Sbjct: 465 PGAVLNELLASGRLPAVILDKVFRQSEGSLVA---------------------------E 497 Query: 1168 GAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTP-EAREQ 1226 A H V+E + + + + + V + TP + + Sbjct: 498 NAQRIRHGVSELDFGDDFQFWTSADEMQSAQYLMRLYKREVARFGVDNVALLTPFRKKSE 557 Query: 1227 TLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDA 1286 T + + LN+ +HD A E + + + +++ + ++ D Sbjct: 558 TGVYS--------LNAALHDEVNPAVPGKAEIEVGQRVLRVGDKVMQMKN-RDFASNGDI 608 Query: 1287 LVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTG---D 1343 + +DGL+ D + + + L TI G D Sbjct: 609 G-------YICTSTQGEDGLLVEVDFGDDRVVAYEDIEALRQLELAYATTIHKSQGSEYD 661 Query: 1344 RMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQH 1393 + D + +++ + G +R Q + Sbjct: 662 AVLINIQDMHGKMLNRALFYTAETRAKKRVIIVGDWDAVVRAIQTADTKR 711 Score = 67.6 bits (163), Expect = 4e-09, Method: Composition-based stats. Identities = 43/228 (18%), Positives = 72/228 (31%), Gaps = 15/228 (6%) Query: 1248 REKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDG-- 1305 R+ G L E + + G+ + T + + +Y R D Sbjct: 488 RQSEGSLVAENAQRIRHGVSELDFGDDFQFWTSADEMQSAQYLMRLYKREVARFGVDNVA 547 Query: 1306 LITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVW--- 1362 L+T + T + S A+ + V P + G R+ D+ Sbjct: 548 LLTPFRKKSETGVYSLNAALHDEVNPAVPGKAEIEVGQRV-LRVGDKVMQMKNRDFASNG 606 Query: 1363 ------TVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIAL 1416 T T + D R + +A + ++LAYA T H +QG + L Sbjct: 607 DIGYICTSTQGEDGLLVEVDFGDDRVVAYEDIEALRQLELAYATTIHKSQG--SEYDAVL 664 Query: 1417 EGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKG 1464 + M Y A +R K+ V + + AI A K Sbjct: 665 INIQDMHGKMLNRALFYTAETRAKKRV-IIVGDWDAVVRAIQTADTKR 711 >UniRef50_A6TL79 Helicase, RecD/TraA family n=35 Tax=Bacteria RepID=A6TL79_ALKMQ Length = 754 Score = 143 bits (361), Expect = 5e-32, Method: Composition-based stats. Identities = 116/737 (15%), Positives = 223/737 (30%), Gaps = 159/737 (21%) Query: 733 DRLQVASVSEDAMTVVVP-GRAEPATLPVSDSP----FTALKLENGWVETPGHSVSDSAT 787 D L+V + + + V GRA+ T+ + + + + TP ++V Sbjct: 114 DSLEVIQYAPERLREVEGIGRAKAETITETFRDQKELREIILFLSEYHITPNYAVK---- 169 Query: 788 VFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGET 847 + + N R ++ A + HP T Sbjct: 170 IHKKYGDKTIATIQENPY-RLADEIVGIGFKRADAIARNMGVHPHSKYRIHSGIKYMLNT 228 Query: 848 SLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGE 907 ++ P + I A ++ + + A + + + E Sbjct: 229 FQGEGHTYA------PGVKLIQRAEELLR-VEEGQVEGAIQELALN---QEIQLERIDDE 278 Query: 908 INAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKE-AVMPLMERVPGELM 966 I ++ S Y AE ++ + ++ + + P+ + EL Sbjct: 279 I---------------------IVYSMPYYYAESNVCKKLISLAQVELDPIEMDIDEELQ 317 Query: 967 E-------KLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPR 1019 + L Q+ A + + + +V+ G T ++++ + E + Sbjct: 318 KIEQAEEMTLAKQQKEAIKEAI--ENGISVITGGP----GTGKTTTINSLIKVFEKLELK 371 Query: 1020 VVGLGPTHRAVGEMRSA-GVDAQTLASFLHDTQLQQRSG------ETPDFSNTLFLLDES 1072 ++ PT RA M A G +++T+ L R G E + ++DE Sbjct: 372 MLLAAPTGRASKRMTEATGKESKTIHRLLELGFGDDREGMLFQRNEDNPLDCHVIIIDEV 431 Query: 1073 SMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQ 1132 SMV M I A G R V GD DQL ++ G R + EI RQ Sbjct: 432 SMVDIILMNSLMKSI-ARGTRVVLVGDVDQLPSVGAGNVLRDIIDSKVVKTIRLTEIFRQ 490 Query: 1133 TPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQ 1192 A S+I + R GL P +Q+ + + + E + +L + Sbjct: 491 ------AQESMIVVNAHRINQGL---YPQLNEKQKDFYFMKRNAKEDVLATVVELVRDRL 541 Query: 1193 KAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAG 1252 + +A D+ + TP + +T G Sbjct: 542 PKHYQFDALRDIQV------------LTPMKKGET------------------------G 565 Query: 1253 ELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDA 1312 L + + LN N+ E D ++ + N Y Sbjct: 566 TLNLNKELQAALNPPNVSKAEKDLKEKIFREGDKVMQIKNNY------------------ 607 Query: 1313 EGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVS---G 1369 R + P +G ++ + V ++ Sbjct: 608 TLKWRCLDPMAEEQKGEGVF-------------------------NGDIGYVQSIDTEAE 642 Query: 1370 DSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGF 1429 + V L D Q+ Q ++LAY++T H +QG F + + ++ Sbjct: 643 ELVILFDDQKQVNYSFTQLDE---LELAYSVTIHKSQG--SEFPVVVIPITWGPPMLLTR 697 Query: 1430 ESAYVALSRMKQHVQVY 1446 Y A++R + V + Sbjct: 698 NLLYTAVTRARSLVVLV 714 Score = 51.8 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 42/251 (16%), Positives = 80/251 (31%), Gaps = 39/251 (15%) Query: 449 VAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQL-----LEGMAFTPG- 502 + L+ + + ++ + A R+ M + + I +L EGM F Sbjct: 358 INSLIKVFEKLELKMLLAAPTGRASKRMTEATGKESKTIHRLLELGFGDDREGMLFQRNE 417 Query: 503 ------STVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQ--RTGTGSALMAMKDAG 554 +I+D+ + + +L+ AR VL+ D Q G G+ L + D+ Sbjct: 418 DNPLDCHVIIIDEVSMVDIILMNSLMKSIARGTRVVLVGDVDQLPSVGAGNVLRDIIDSK 477 Query: 555 VNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQ--AILTQ 612 V R A R + G + + ++ +E A + + Sbjct: 478 VVKTIRLTEIFRQAQESMIVVNAHRINQ--GLYPQLNEKQKDFYFMKRNAKEDVLATVVE 535 Query: 613 AIRSELKTQ--------------------GVLGLPEVTMTALSPVWLDSRSRYL-RDMYR 651 +R L G L L + AL+P + + L ++R Sbjct: 536 LVRDRLPKHYQFDALRDIQVLTPMKKGETGTLNLNKELQAALNPPNVSKAEKDLKEKIFR 595 Query: 652 PGMVMEQWNPE 662 G + Q Sbjct: 596 EGDKVMQIKNN 606 >UniRef50_UPI000050FF73 TrwC relaxase n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050FF73 Length = 1152 Score = 143 bits (361), Expect = 5e-32, Method: Composition-based stats. Identities = 159/934 (17%), Positives = 275/934 (29%), Gaps = 162/934 (17%) Query: 4 IAQVRSAGSAGNYYTD-----KDNYYVLGSMG------ERWAGRGAEQLGLQGSVDKDVF 52 + R G+A Y + D+YY+ G G GL D + + Sbjct: 8 VTLFRGPGTAARRYLESDRSTADDYYLEGGTALADFTITNSRGEVVANTGL----DPEQY 63 Query: 53 TRLLEGRLPDGADLSRMQDGSNRHRPGY----DLTFSAPKSVSMMAMLGGD--KRLIDAH 106 ++ P + + + R G ++ + PKS+S+ A L + L A Sbjct: 64 AGWVDWTHPLTGEQMGIPREAGEIRKGSPRFAEMVVNTPKSLSIAAALHPEVSDALDAAQ 123 Query: 107 NQAVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVT 166 AV R + A TRV GQ E + ++ H TSR +P H H + Sbjct: 124 QDAVAEIRRWLAQHAYTRVGPRGQQEIIPAESVQTVAVVHRTSRAGDPHRHVHFQIGTRV 183 Query: 167 QHNGEWKTLSSDKVGK-TGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWE 225 G+W+ L + + K G I + A IA +L ++ G + V + E Sbjct: 184 PAAGKWRALDTAVLFKQQGAIRALGAAVIAA----NPQLAATLDRHGLTLDSVTGE-VTE 238 Query: 226 MPGVPVEAFSGRSQTIREAV------------GEDASLKSRD----VAALDTRKSKQHVD 269 + S R+ + + GE+A R A R +K+ D Sbjct: 239 LEAFNP-VMSKRAHQVERNLKRLEAEWEAAHPGEEAGPVVRARLLHKAWAHERPNKKPSD 297 Query: 270 PEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSE 329 + A W Q L E G++ + R P S D VQ+ +A+ + Sbjct: 298 LGDEDA-WKQELVEAGYEPKTL---------TRAPAPERVSVDDLSVQEVANRALDRSAA 347 Query: 330 RKVQFTYTDVLARTVGILPPENG------VIERARAGIDEAISR-----EQLIPLDREKG 378 +T + I + E + D AI Sbjct: 348 GGSTWTVHTIREHVTRITTDHGVQATPAELREFVQLATDLAIGDCFSVLPPGAVHPEHVA 407 Query: 379 LFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYS---DAVSVLAQDRPSLAI 435 TS V E +R + G + R L + Sbjct: 408 HLTSLRVVEAETQLRDRLEAQAPNREPPRPDLTELAAEHGLDAGQAEAAAAVASRDPLVV 467 Query: 436 VSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQL-- 493 V G G +G+ +A + GR V+++ +++ + ++ + + Sbjct: 468 VEGAAG-SGKTTMLATAIEALDHDGRSVRVVTPTKKAAQVAAETLKVPADSVAALVYAHG 526 Query: 494 ----------------------------LEGMAFTPGSTVIVDQGEKLSLKETLTLLDGA 525 +G G VIVD+ L L LL Sbjct: 527 FRWNDDGVWTRLNPGDADPATGQTYTGPRKGARLVRGERVIVDEAGMLDQDTALALLTII 586 Query: 526 ARHNVQV-LITDSGQRTGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLA 584 V L+ D Q G + K A + E N +YA L Sbjct: 587 REAKASVALVGDRAQLPAVGRGGVLDKAAHIRGATVDMSELHRFA-------NDQYAALT 639 Query: 585 GDF-AASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRS 643 A V Q G+ A+R + Q + VT+ Sbjct: 640 LRMRDGRNPAAIFDVLQAMGLVRLHADDDAMREHI-AQNTIPEDAVTVAT---------- 688 Query: 644 RYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWS 703 + T + + T + +D++ + Sbjct: 689 ----------------------------------NDEATALNERIRTVRIEAGEVDNART 714 Query: 704 LFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDA-MTVVVPGRAEPATLPVSD 762 + + + + G+ ++ LRV+ V +SED + + G + V+ Sbjct: 715 VTGSDGLAIGVGDLVQARQNDAELRVANRQTFTVQQISEDGTVHAIETGTDRKHNVTVTL 774 Query: 763 SP-FTALKLENGWVETP----GHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSS 817 P + A + + T G +V + TV + A A GL R L+ Sbjct: 775 PPGYVAEHVHLAYAATAYGVQGITVDSAHTVLSDALDAA---AVYVGLTRGSGRNELHVI 831 Query: 818 LDETRTAEKLARHPSFTVVSEQIKTRAGETSLET 851 + A +++ T A + E Sbjct: 832 AADLAEARGQFVEAMGRDRADRGLTEATARANEA 865 Score = 95.3 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 68/413 (16%), Positives = 116/413 (28%), Gaps = 82/413 (19%) Query: 931 LVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVV 990 L S EAE + + P + E +A + + D VV Sbjct: 409 LTSLRVVEAETQLRDRLEAQAPNREPPRPDLTELAAEHGLDAGQAEAAAAVASRDPLVVV 468 Query: 991 QGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA-GVDAQTLASFLHD 1049 +G AG GKTT + A++ + V + PT +A V A ++A+ ++ Sbjct: 469 EGAAGSGKTTMLATAIEALDH----DGRSVRVVTPTKKAAQVAAETLKVPADSVAALVYA 524 Query: 1050 TQLQQRS------------------------GETPDFSNTLFLLDESSMVGNTDMARAYA 1085 + ++DE+ M+ Sbjct: 525 HGFRWNDDGVWTRLNPGDADPATGQTYTGPRKGARLVRGERVIVDEAGMLDQDTALALLT 584 Query: 1086 LIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLIN 1145 +I GD QL A+ G A V M E+ R + + A +L Sbjct: 585 IIREAKASVALVGDRAQLPAVGRGGVLDKAAHIRGATV-DMSELHRFAND-QYAALTLRM 642 Query: 1146 RDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVP 1205 RD + + ++ + R A AM + A +P Sbjct: 643 RDGRNPAAIFDVLQAMGLVR----------------------LHADDDAMREHIAQNTIP 680 Query: 1206 MTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPV-- 1263 + N++ LN I VR +AGE+ + + Sbjct: 681 EDA--------------------VTVATNDEATALNERIRTVRIEAGEVDNARTVTGSDG 720 Query: 1264 -------LNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITL 1309 L A D ELR + + V+ G + + Sbjct: 721 LAIGVGDLVQARQNDAELRVANRQTFTVQQISEDGTVHAIETGTDRKHNVTVT 773 Score = 56.8 bits (135), Expect = 7e-06, Method: Composition-based stats. Identities = 32/157 (20%), Positives = 57/157 (36%), Gaps = 13/157 (8%) Query: 1327 EGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSV-----TLSDGQQTR 1381 T+ D + +G GD ++ ++D E +TV +S D T +D + Sbjct: 711 NARTVTGSDGLAIGVGDLVQARQNDAELRVANRQTFTVQQISEDGTVHAIETGTDRKHNV 770 Query: 1382 EIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSR--M 1439 + +H+ LAYA TA+G QG + A + + + YV L+R Sbjct: 771 TVTLPPGYVAEHVHLAYAATAYGVQGITVDSAHTVLSDALDAAAV------YVGLTRGSG 824 Query: 1440 KQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDR 1476 + + V + A+ + A R Sbjct: 825 RNELHVIAADLAEARGQFVEAMGRDRADRGLTEATAR 861 >UniRef50_C0AD34 Exodeoxyribonuclease V n=2 Tax=Verrucomicrobia RepID=C0AD34_9BACT Length = 759 Score = 143 bits (360), Expect = 6e-32, Method: Composition-based stats. Identities = 60/292 (20%), Positives = 110/292 (37%), Gaps = 24/292 (8%) Query: 876 ESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLL---YVDVAKGYGTGLLV 932 E A DL+ A T L I+A +++ DL+ DV K L+ Sbjct: 251 EEGHTALREADLIDYAAPLL--ETAAERLAARIDALVEQRDLIRHWPPDVDKPLPGSALI 308 Query: 933 SRASYE-AEKSI---LRHILEGKEAVMPL-----MERVPGELMEKLTSGQRAATRMILET 983 + AE+ I + + + A+ P+ ++ + + QRAA R L + Sbjct: 309 QLPVLDRAEQKIAASIVRLTKTGSALPPIKTEAALDWAQQKAGFQFADQQRAALRAALVS 368 Query: 984 SDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM-RSAGVDAQT 1042 + +++ G G GKT RA++ + +++ R+ PT RA + + G A T Sbjct: 369 --KASILTGGPGTGKTASLRALVDILK----AKKVRIHLAAPTGRAAQRLTETTGGYATT 422 Query: 1043 LASFLH--DTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDT 1100 + L + E + ++DE+SM+ A I + + GD Sbjct: 423 IHRLLKYDAAKGGFVHNEHQPLATDFLVVDEASMLDTRLAAALLQAIPSR-AHLLLVGDI 481 Query: 1101 DQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERAL 1152 DQL ++ G + V + I RQ + + + + +L Sbjct: 482 DQLPSVGAGNVLKDIIATQHVPVTRLNVIHRQQGQSQIVTTAHAINAGDPSL 533 Score = 63.3 bits (152), Expect = 8e-08, Method: Composition-based stats. Identities = 54/317 (17%), Positives = 97/317 (30%), Gaps = 39/317 (12%) Query: 288 IRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSER-KVQFTYTDVLARTVGI 346 R + AD + G A+ P + + A+ L E D++ + Sbjct: 210 ARDVDGIGFKTADRIAINLGFANDAPPRLDAGLIYAMDTLQEEGHTALREADLIDYAAPL 269 Query: 347 LPPENGVIERARAGIDEAISREQLI---PLDREKGLFTSGIHVL-----DELSVRALSRD 398 L ER A ID + + LI P D +K L S + L E + A Sbjct: 270 LET---AAERLAARIDALVEQRDLIRHWPPDVDKPLPGSALIQLPVLDRAEQKIAASIVR 326 Query: 399 IMKQNRVTVHPEKSVPRTAGY-----------SDAVSVLAQDRPSLAIVSGQGGAAGQRE 447 + K + A+ + S+ + G G G+ Sbjct: 327 LTKTGSALPPIKTEAALDWAQQKAGFQFADQQRAALRAALVSKASI-LTGGPG--TGKTA 383 Query: 448 RVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQL------LEGMAFTP 501 + LV + + + + + A R+ + + I + P Sbjct: 384 SLRALVDILKAKKVRIHLAAPTGRAAQRLTETTGGYATTIHRLLKYDAAKGGFVHNEHQP 443 Query: 502 GST--VIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQ--RTGTGSALM---AMKDAG 554 +T ++VD+ L + LL +L+ D Q G G+ L A + Sbjct: 444 LATDFLVVDEASMLDTRLAAALLQAIPSRAHLLLVGDIDQLPSVGAGNVLKDIIATQHVP 503 Query: 555 VNTYRWQGGEQRPATII 571 V +Q + I+ Sbjct: 504 VTRLNVIHRQQGQSQIV 520 Score = 59.1 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 48/130 (36%), Gaps = 3/130 (2%) Query: 1338 RVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLA 1397 GD++ +++ ++ + T+TAV + D E + LA Sbjct: 622 EFRVGDKIIQLRNNYDKNLFNGDIGTITAVDAEEGAF-DATFDGETHVFARGDAGDLALA 680 Query: 1398 YAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAI 1457 +AI+ H +QG+ I +M Y A++R K+ V + + Sbjct: 681 HAISIHKSQGSEYPVVIVPL--MKAHFMMLQRNLLYTAITRGKKKVYIVGEPAAYAMAVR 738 Query: 1458 NNAVQKGTAH 1467 NN + T H Sbjct: 739 NNEARARTTH 748 >UniRef50_Q30PF5 ATPase n=2 Tax=Campylobacterales RepID=Q30PF5_SULDN Length = 745 Score = 143 bits (360), Expect = 6e-32, Method: Composition-based stats. Identities = 109/669 (16%), Positives = 223/669 (33%), Gaps = 107/669 (15%) Query: 792 VTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIK-TRAGETSLE 850 +T + A L +A + RDV E A K+ +P I RA E +L+ Sbjct: 145 LTPYDVTPAFLTTIATAMRDV-------EEPCA-KIKNNPYILTSINSIGFKRADELALK 196 Query: 851 TAISHQKSALHTPAQQAIHLALPVVES--------KKLAFSMVDLLTEAKSFAAEGTGFT 902 + K A+ L K++ F +D E +F+ + + Sbjct: 197 MGV---KKDDENRISSAMDYVLLNYCEQQGNSCVAKEILFFELD---ELLTFSDKSYLY- 249 Query: 903 ELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVP 962 + ++ G ++ + + L + E R ++ Sbjct: 250 --EASLVERVSEGSIVLMKNERVSPARLYDAEKYLYDEFK--RRAKLDNGGFTKDLDLFL 305 Query: 963 GELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVG 1022 E KL Q+ A + I E S + GYAG GK+T R+++ +N + ++ ++ Sbjct: 306 SEHDLKLGDEQKEALKKINEGSS-ILFLVGYAGTGKSTTSRSILDLLNT--KYDKKEIIT 362 Query: 1023 LGPTHRAVGEMRSA-GVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMA 1081 + A + G ++ T+ S L + E +F ++ L+DE+SM+ ++ A Sbjct: 363 CALSGIASQRIADTTGYESATIQSLLVKFE------ERDEFPYSVVLIDEASMINSSLFA 416 Query: 1082 RAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVY 1141 R ++ + GD QL I G T A + + +I RQ+ + +A+ Sbjct: 417 RLVRKVSKS-ALLIVVGDDAQLPPIGAGNVLSDVLTLCLAPIVKLTKIYRQSED--KAIT 473 Query: 1142 SLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAF 1201 + N + L + K + + ++ + +A+L+ +++ + A Sbjct: 474 VIAN---DIRLGVVPEYKREYEDFEFVDVSMQNYYALKNQLTQAELSSQREENSAQIVAV 530 Query: 1202 PDVPMTLYEAIVRDYTGRTPEAREQTL----IVTHLNEDRRVLNSMIHDVREKAGELGKE 1257 + + E+I + + + ++ L ++T K G LG Sbjct: 531 --IAHKVVESIEKARYRLSNKQIKEYLNYFQVITP----------------MKGGTLGSN 572 Query: 1258 QVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTR 1317 + + VL + + + V V R+ + K + N Sbjct: 573 NLNI-VLQ------------NYFNPNPKKCVKKGGVEFRL--MDK-----VVHTKNENMT 612 Query: 1318 LISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDG 1377 S E +G + F + + V + D V + + Sbjct: 613 SWS-SEGFKNSEDSAQRRIFNGMSG--LLFKIEEDD------EQAFVFYPNEDVVVVYEY 663 Query: 1378 QQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALS 1437 ++ R H QG + I + + +M + Y A++ Sbjct: 664 EELRSHLMLSYALTIH----------KVQGM--EYDIVVIPMSFSHYIMHNTKLIYTAVT 711 Query: 1438 RMKQHVQVY 1446 R K + Sbjct: 712 RAKHKCILV 720 Score = 62.6 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 42/283 (14%), Positives = 95/283 (33%), Gaps = 12/283 (4%) Query: 297 QRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYT-DVLARTVGILPPENGVIE 355 +RAD L G D + A+ + E++ ++L + L + Sbjct: 188 KRADELALKMGVKKDDENRISSAMDYVLLNYCEQQGNSCVAKEILFFELDELLTFSDKSY 247 Query: 356 RARAGIDEAISREQLIPLDREK----GLFTSGIHVLDELSVRA-LSRDIMKQNRVTVHPE 410 A + E +S ++ + E+ L+ + ++ DE RA L ++ E Sbjct: 248 LYEASLVERVSEGSIVLMKNERVSPARLYDAEKYLYDEFKRRAKLDNGGFTKDLDLFLSE 307 Query: 411 KSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQ--GREVQIIAA 468 + +A+ + + L +V G G G+ ++ + + +E+ A Sbjct: 308 HDLKLGDEQKEALKKINEGSSILFLV-GYAG-TGKSTTSRSILDLLNTKYDKKEIITCAL 365 Query: 469 DRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARH 528 + + I E P S V++D+ ++ L+ ++ Sbjct: 366 SGIASQRIADTTGYESATIQSLLVKFEERDEFPYSVVLIDEASMINSSLFARLVRKVSKS 425 Query: 529 NVQVLITDSGQR--TGTGSALMAMKDAGVNTYRWQGGEQRPAT 569 + +++ D Q G G+ L + + R + Sbjct: 426 ALLIVVGDDAQLPPIGAGNVLSDVLTLCLAPIVKLTKIYRQSE 468 >UniRef50_D1ZVM1 N-terminus not complete (Fragment) n=1 Tax=Sordaria macrospora RepID=D1ZVM1_SORMA Length = 466 Score = 143 bits (359), Expect = 8e-32, Method: Composition-based stats. Identities = 44/214 (20%), Positives = 90/214 (42%), Gaps = 16/214 (7%) Query: 1267 ANIRDGELRRLSTWETHRDALVLVDNVY-------HRIAGISKDDGLITLQDAEGNTRLI 1319 + ELR T++ + + + + G+ G + +Q R Sbjct: 164 RDDTGEELRYAHTYKPGQVIDLRHAMRELGLSPGTYDVLGVDAK-GRVQVQIGN-RVRTF 221 Query: 1320 SPRE----AVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLS 1375 P++ + + L + I++ GD++R+T++D++RG N + V + + + Sbjct: 222 DPQKISPVDKTDAMQLAQREQIKLHEGDKIRWTQNDKDRGLNNNDIARVVSADPSGIKVE 281 Query: 1376 DGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVA 1435 T + + I LAYA+ H AQG + AIA+ ++ V Sbjct: 282 ASDGTLHELKAGDPMMERISLAYALNMHAAQGITTDTAIAVMSH--RESNLSNQRLFNVT 339 Query: 1436 LSRMKQHVQVYTDNRQGWTDAINN-AVQKGTAHD 1468 ++R++ +Q++TD+R+ T AI K +A + Sbjct: 340 VTRVRDDIQLFTDDREKLTAAIERNEGNKTSALE 373 Score = 73.7 bits (179), Expect = 6e-11, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 69/207 (33%), Gaps = 11/207 (5%) Query: 640 DSRSRYLRDMYRPGMVMEQWNPETR---SHDRYVIDRVTAQSHSLTLRDAQGET---QVV 693 Y+PG V++ + S Y + V A+ + T Q + Sbjct: 167 TGEELRYAHTYKPGQVIDLRHAMRELGLSPGTYDVLGVDAKGRVQVQIGNRVRTFDPQKI 226 Query: 694 RISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRA 753 + L + E++ + +G+++R T ++ D +V S + V Sbjct: 227 SPVDKTDAMQLAQREQIKLHEGDKIRWTQNDKDRGLNNNDIARVVSADPSGIKVEASD-G 285 Query: 754 EPATLPVSDSPFTALKLENGWVETPGHSV-SDSATVFASVTQMAMDNATL--NGLARSGR 810 L D + L + +D+A S + + N L + R Sbjct: 286 TLHELKAGDPMMERISLAYALNMHAAQGITTDTAIAVMSHRESNLSNQRLFNVTVTRVRD 345 Query: 811 DVRLYSSLDETRTAEKLARHPSFTVVS 837 D++L++ E TA + R+ + Sbjct: 346 DIQLFTDDREKLTAA-IERNEGNKTSA 371 >UniRef50_A4XG10 ATP-dependent DNA helicase, RecD/TraA family n=2 Tax=Clostridia RepID=A4XG10_CALS8 Length = 741 Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats. Identities = 90/562 (16%), Positives = 169/562 (30%), Gaps = 116/562 (20%) Query: 898 GTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSI---LRHILEGKEAV 954 ++ +++ IK + +D G L +E E+ I + +L+ + + Sbjct: 245 EQDTEKVEEALDSLIK-AKRVVIDTVDGLEMVFLY--GFFECERYIAEKIASMLKEYDDI 301 Query: 955 MPLMERVPGELMEK---LTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNM 1011 + + ER+ + + Q+ A +M L +V+ G T ++ + Sbjct: 302 LDIDERISEFEKKNSIVFSQNQKKAIKMALT--QGVSVITGGP----GTGKTTIIKCIIE 355 Query: 1012 LPESERPRVVGLGPTHRAVGEMRS-AGVDAQTLASFLH----DTQLQQRSGETPDFSNTL 1066 + E E +V PT RA M+ +A+T+ L D+Q+ + G + Sbjct: 356 IFEQEGKKVFLCAPTGRAAKRMQQQCEKEAKTIHRLLEMTVTDSQVFFQKGPNNPLRCDV 415 Query: 1067 FLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIM 1126 ++DE SMV + M + R V GD DQL ++ G + + Sbjct: 416 IIVDEMSMVDSYIMYYLLS-ATKDTTRLVLVGDKDQLPSVGAGNILKDLIRSDVVPYVRL 474 Query: 1127 KEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAK 1186 E+ RQ+ + H + K Sbjct: 475 TEVYRQSED-------------------------------SFIVLNAHRINNGEFPYLQK 503 Query: 1187 LAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHD 1246 ++ E + L + +Y P Q L + Sbjct: 504 NSDFYFIQKNSPEEILKTIVELVTKKLPNYLSADPLTDIQVLC--PSKKGVV-------- 553 Query: 1247 VREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGI--SKDD 1304 G +V+ LN + E+ D ++ + N Y I ++ Sbjct: 554 -----GMYNINRVLQQYLNPKDGSKKEVVYKENTFRVGDKVMQIKNNYSLEFTIIEGEEK 608 Query: 1305 GLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTV 1364 G ++ G+ +I D +R A + Sbjct: 609 GKVSTGIFNGDIGVI------------------------------KDIDRAGSAMEIV-- 636 Query: 1365 TAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRK 1424 D + D + + A +T H +QG SE I + E Sbjct: 637 --FDDDKLVFYD---------FSLLDDLELSYA--MTVHKSQG-SEFRCIVMPVVETYPI 682 Query: 1425 LMAGFESAYVALSRMKQHVQVY 1446 LM Y A++R K+ V + Sbjct: 683 LMT-RNLLYTAVTRAKELVVLV 703 Score = 60.3 bits (144), Expect = 6e-07, Method: Composition-based stats. Identities = 68/528 (12%), Positives = 162/528 (30%), Gaps = 72/528 (13%) Query: 286 FDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFT--YTDVLART 343 F + + + ++ D G + D + + + S + ++ Sbjct: 181 FLLDVFPELDFKKVDRLAFDLGVSPDDMRRISAKIVNLLNMGSNNEGHICLPKEKLILFV 240 Query: 344 VGILPPENGVIERARAGIDEAISREQLIPLDREK-------GLFTSGIHVLDELSVRALS 396 L + E+ +D I ++++ + G F ++ ++++ Sbjct: 241 SKALEQD---TEKVEEALDSLIKAKRVVIDTVDGLEMVFLYGFFECERYIAEKIASMLKE 297 Query: 397 RDIM---KQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELV 453 D + + + S+ + A+ + S+ G + ++ Sbjct: 298 YDDILDIDERISEFEKKNSIVFSQNQKKAIKMALTQGVSVITGGPGTGKT---TIIKCII 354 Query: 454 MMAREQGREVQIIAADRRSQMNMKQD--------ERLSGELITGRRQLLEGMAFTPGS-- 503 + ++G++V + A R+ M+Q RL +T + + P Sbjct: 355 EIFEQEGKKVFLCAPTGRAAKRMQQQCEKEAKTIHRLLEMTVTDSQVFFQKGPNNPLRCD 414 Query: 504 TVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQ--RTGTGSALMAMKDAGVNTYRWQ 561 +IVD+ + LL VL+ D Q G G+ L + + V Y Sbjct: 415 VIIVDEMSMVDSYIMYYLLSATKDTTRLVLVGDKDQLPSVGAGNILKDLIRSDVVPYVRL 474 Query: 562 GGEQRPAT-------IISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAI 614 R + + Y + DF K E + + ++T+ + Sbjct: 475 TEVYRQSEDSFIVLNAHRINNGEFPYLQKNSDFYFIQKNSPEEILKTI----VELVTKKL 530 Query: 615 RSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRV 674 + L P + L P + + MY V++Q+ + V+ + Sbjct: 531 PNYLSAD-----PLTDIQVLCP-----SKKGVVGMYNINRVLQQYLNPKDGSKKEVVYK- 579 Query: 675 TAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDR 734 ++ + D ++ + +++SL + + +GE + GD Sbjct: 580 ---ENTFRVGD--------KVMQIKNNYSL----EFTIIEGE----EKGKVSTGIFNGD- 619 Query: 735 LQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSV 782 + V + A + + + + S L+L Sbjct: 620 IGVIKDIDRAGSAMEIVFDDDKLVFYDFSLLDDLELSYAMTVHKSQGS 667 >UniRef50_C3RPY6 Exonuclease V subunit alpha n=1 Tax=Mollicutes bacterium D7 RepID=C3RPY6_9MOLU Length = 737 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 62/343 (18%), Positives = 112/343 (32%), Gaps = 19/343 (5%) Query: 963 GELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVG 1022 E KL Q+ A L + F+++ G G GKTT + S ++ R+ Sbjct: 329 EENHFKLADKQKEAIESALS--NTFSIISGPPGSGKTTIIDVICSYFK--YYNKNIRINL 384 Query: 1023 LGPTHRAVGEM-RSAGVDAQTLASFL----HDTQLQQRSGETPDFSNTLFLLDESSMVGN 1077 PT +A M S G+ A T+ L D + + E + ++DE SMV Sbjct: 385 CAPTAKAAKRMFDSTGIQASTIHRLLEFNPADGEGGFKYNEYNPLKTDILVVDEFSMVDL 444 Query: 1078 TDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPE-- 1135 I + GD +QL ++ G+ ++ +I RQ + Sbjct: 445 LMTENLLKAIPETITALIFVGDINQLPSVDAGRVLEDMLQS-KIPSTLLNKIYRQQEDST 503 Query: 1136 LREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAM 1195 L + E+++ ++ + E V F E E + Sbjct: 504 LLQKALDFSK---EKSIELADTKDFFFYSEKNELAIQEGVVNLFISEVEKYGIENVALLI 560 Query: 1196 LKGE---AFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKA- 1251 + E + + + + TPE R + + +N H+V Sbjct: 561 PQNEGTFGVNTLNCLIQDKLNPKLFDTTPELRSGSRKFRIGDRVIHTVNEDNHNVFNGMV 620 Query: 1252 GELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVY 1294 G + ++ +T + + E HRD + Y Sbjct: 621 GTITDIEIGDKDFDTEDTIIVDYGEDELSEYHRDRFDNIKLAY 663 Score = 72.6 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 24/122 (19%), Positives = 45/122 (36%), Gaps = 8/122 (6%) Query: 1333 TPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVS------GDSVTLSDGQQTREIRPG 1386 + + GDR+ T ++ V T+T + T+ E+ Sbjct: 592 RSGSRKFRIGDRVIHTVNEDNHNVFNGMVGTITDIEIGDKDFDTEDTIIVDYGEDELSEY 651 Query: 1387 QEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVY 1446 +I LAYA+T H +QG+ I + + M + Y ++R K ++ + Sbjct: 652 HRDRFDNIKLAYAMTIHKSQGSEYKSVIMILH--MANRFMLTKKLVYTGMTRAKSYLHLV 709 Query: 1447 TD 1448 D Sbjct: 710 GD 711 >UniRef50_D2S7J1 Helicase, RecD/TraA family n=15 Tax=Actinomycetales RepID=D2S7J1_9ACTO Length = 754 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 67/378 (17%), Positives = 121/378 (32%), Gaps = 50/378 (13%) Query: 954 VMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLP 1013 + + +L +GQ+AA R+ L +R V+ G G GK+ R+++ L Sbjct: 322 WTAALSWLGRRTGVELAAGQQAAVRLALT--ERVAVLTGGPGCGKSFTVRSIV----TLA 375 Query: 1014 ESERPRVVGLGPTHRAVGEMRS-AGVDAQTLASFLHDTQLQQRSGETP-DFSNTLFLLDE 1071 ++ R+V PT RA + GV+A T+ L + + L ++DE Sbjct: 376 AAKGARIVLAAPTGRAAKRLTELTGVEAVTVHRLLELRPGGDAAFDRDRPLEADLVVVDE 435 Query: 1072 SSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRS-AADVAIMKEIV 1130 SSM+ +A G + GD DQL ++ G+ R + E+ Sbjct: 436 SSMLDL-LLANKLVRAVPPGAHLLLVGDVDQLPSVGAGEVLRDLLAEGTPIPHVRLTEVF 494 Query: 1131 RQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEA 1190 RQ + G H V S Q L + Sbjct: 495 RQAS-------------------------------RSGVVTNAHRVNAGSFPQVRGLDDF 523 Query: 1191 QQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLN---EDRRVLNSMIHDV 1247 + E + + + + G P R ++T ++ VLN ++ + Sbjct: 524 FLFSTDDAEEAARLTVDVVVRRIPARFGLDP--RRDVQVLTPVHRGPAGAAVLNELLQEA 581 Query: 1248 REKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLI 1307 A + R G+ + + A + + + I + + Sbjct: 582 LTPA----RPDRAEKRFGGRVFRVGDKVSQIRNDYDKGANGVFNGTQGVVTAIDPVEQTL 637 Query: 1308 TLQDAEGNTRLISPREAV 1325 T+ EG E Sbjct: 638 TVVTDEGEQIPYDFGELD 655 Score = 66.8 bits (161), Expect = 9e-09, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 44/113 (38%), Gaps = 5/113 (4%) Query: 1337 IRVGTGDRMRFTKSDRERG---YVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQH 1393 GD++ ++D ++G + VTA+ TL+ E P Sbjct: 597 RVFRVGDKVSQIRNDYDKGANGVFNGTQGVVTAIDPVEQTLTVVTDEGEQIPYDFGELDE 656 Query: 1394 IDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVY 1446 + AYA+T H +QG+ + T +M Y A++R KQ V + Sbjct: 657 LVHAYAVTVHRSQGSEYPCVVIPVTTSA--WMMLQRNLLYTAVTRAKQLVVLV 707 Score = 66.4 bits (160), Expect = 9e-09, Method: Composition-based stats. Identities = 60/333 (18%), Positives = 103/333 (30%), Gaps = 46/333 (13%) Query: 413 VPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRS 472 V AG AV + +R +A+++G G G+ V +V +A +G + + A R+ Sbjct: 335 VELAAGQQAAVRLALTER--VAVLTGGPGC-GKSFTVRSIVTLAAAKGARIVLAAPTGRA 391 Query: 473 QMNMKQDERLSGELITGRRQLLEGMAFTPGS-------TVIVDQGEKLSLKETLTLLDGA 525 + + + + +L G V+VD+ L L L+ Sbjct: 392 AKRLTELTGVEAVTVHRLLELRPGGDAAFDRDRPLEADLVVVDESSMLDLLLANKLVRAV 451 Query: 526 ARHNVQVLITDSGQ--RTGTGSALMAMKDAGVN-TYRWQGGEQRPATIISEPDRNVRYAR 582 +L+ D Q G G L + G + R A+ R Sbjct: 452 PPGAHLLLVGDVDQLPSVGAGEVLRDLLAEGTPIPHVRLTEVFRQASRSGVVTNAHRVNA 511 Query: 583 --------LAGDFAASVKAGEESVAQV--------------SGVREQAILTQAIRSELKT 620 L F S EE+ R+ +LT R Sbjct: 512 GSFPQVRGLDDFFLFSTDDAEEAARLTVDVVVRRIPARFGLDPRRDVQVLTPVHRG---P 568 Query: 621 QGVLGLPEVTMTALSPVWLDSRSRYLRDM-YRPGMVMEQWNPET-------RSHDRYVID 672 G L E+ AL+P D + +R G + Q + + + V+ Sbjct: 569 AGAAVLNELLQEALTPARPDRAEKRFGGRVFRVGDKVSQIRNDYDKGANGVFNGTQGVVT 628 Query: 673 RVTAQSHSLTLRDAQGETQVVRISSLDSSWSLF 705 + +LT+ +GE LD + Sbjct: 629 AIDPVEQTLTVVTDEGEQIPYDFGELDELVHAY 661 >UniRef50_B9Z717 Putative uncharacterized protein n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z717_9NEIS Length = 701 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 53/168 (31%), Positives = 73/168 (43%), Gaps = 12/168 (7%) Query: 969 LTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHR 1028 L QR A M F+V+ G AGVGKTT R V+ L +VV + R Sbjct: 328 LNRQQREAVLMATTKP--FSVLTGGAGVGKTTVLRVVIDIAKRLE----LKVVQMALAGR 381 Query: 1029 AVGEMRSA-GVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALI 1087 A M A G A T+A FLH Q + G+ ++TL ++DE+SM+ R + Sbjct: 382 AAKRMAEATGHTAMTIAKFLH----QAKEGQLEVSADTLVIVDEASMLDLPTAFRILRYL 437 Query: 1088 AAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPE 1135 G R + GD QL I G F + + ++ RQT E Sbjct: 438 -PDGARLLLVGDPAQLPPIGFGLVFHRLVQSPNVPLVELMQVHRQTAE 484 Score = 63.3 bits (152), Expect = 8e-08, Method: Composition-based stats. Identities = 43/271 (15%), Positives = 86/271 (31%), Gaps = 23/271 (8%) Query: 294 AADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGV 353 A+ ++ D L G D + AV A+ + T D+L + L + Sbjct: 189 ASWRQTDAAALKLGVQIDDVRRMVGAVEAALYARLQSAHTVTLADLLKIRIASLLGADLK 248 Query: 354 IERARAGIDEAISREQLIP------------------LDREKGLFTSGIHVLDELSVRAL 395 A+ I+ A++ ++ +R + + T + L Sbjct: 249 KNSAQHPIELALAEGAVVGNAEAGYQPIGAAALEIRIAERIRAMLTGETPIQFSLFKTDF 308 Query: 396 SRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMM 455 D + V + +AV L ++++G G G+ + ++ + Sbjct: 309 KPDWLHAAIVENETTQGFALNRQQREAV--LMATTKPFSVLTGGAG-VGKTTVLRVVIDI 365 Query: 456 AREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFT--PGSTVIVDQGEKL 513 A+ +V +A R+ M + + I + + VIVD+ L Sbjct: 366 AKRLELKVVQMALAGRAAKRMAEATGHTAMTIAKFLHQAKEGQLEVSADTLVIVDEASML 425 Query: 514 SLKETLTLLDGAARHNVQVLITDSGQRTGTG 544 L +L +L+ D Q G Sbjct: 426 DLPTAFRILRYLPDGARLLLVGDPAQLPPIG 456 Score = 62.2 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 54/126 (42%), Gaps = 8/126 (6%) Query: 1338 RVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVT--LSDGQQTREIRPGQEQAEQHID 1395 + G G+ + +D +RG + ++ + + D + L D + T P E ++ ++ Sbjct: 571 QFGVGEPVVHLINDYDRGLMNGTLGHIVDIKNDDHSGLLIDFEGTVHFLPATEVRDR-LE 629 Query: 1396 LAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTD 1455 LAYAI+ H AQG+ + + + Y AL+R V V+ +R + Sbjct: 630 LAYAISVHKAQGSQFRRVAVVI----TKSRILDHALIYTALTRGIHQV-VFVGDRAAFEQ 684 Query: 1456 AINNAV 1461 AI Sbjct: 685 AIRAPS 690 >UniRef50_D2U0N4 Conjugal transfer nickase/helicase TraI (Fragment) n=1 Tax=Arsenophonus nasoniae RepID=D2U0N4_9ENTR Length = 184 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 67/192 (34%), Positives = 98/192 (51%), Gaps = 8/192 (4%) Query: 204 LKEQVEALGYETEVVGKHGMWEMPGVPVEAFSGRSQTIREAVGEDASLKSRDVAALDTRK 263 +KE++ GY+ G++G E+ GVP + FS R + I AVGE A+ K + VA LDTR+ Sbjct: 1 MKEELTGQGYQFVAAGQNGQSEIKGVPTDIFSSRRKEIIAAVGEKATAKQKMVATLDTRQ 60 Query: 264 SKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQA 323 K + E EW Q L+ TGFD A + Q +QQAV A Sbjct: 61 KKDFSNIETVRQEWKQKLQATGFDKNAIIKPV--------IHEKIDRQQHITLQQAVKNA 112 Query: 324 IAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSG 383 I L +FTY +L + + +P E+G+I R RA I + + + LIP++RE FT+ Sbjct: 113 IQSLEIHHHRFTYDKLLTQVINQIPYESGMINRLRAEIGKFLDKGDLIPVNREGTAFTTA 172 Query: 384 IHVLDELSVRAL 395 + E +V L Sbjct: 173 HQLKAENAVAQL 184 >UniRef50_C3QZL9 ATP-dependent exoDNAse n=20 Tax=Bacteroidales RepID=C3QZL9_9BACE Length = 472 Score = 141 bits (355), Expect = 3e-31, Method: Composition-based stats. Identities = 91/520 (17%), Positives = 173/520 (33%), Gaps = 91/520 (17%) Query: 957 LMERVPGELMEKLTSGQRAATR-----MILETSDRFTVVQGYAGVGKTTQFRAVMSAVNM 1011 L ++ + T Q A + ++ +D +++GYAG GKT+ A++ ++ Sbjct: 6 LERQIKENFPYQPTLEQEIAVKSLSKFLLSTLADEVFILRGYAGTGKTSLVGALVKTMDQ 65 Query: 1012 LPESERPRVVGLGPTHRAVGEMRS-AGVDAQTLASFLHDTQLQQRSGETPDFS-----NT 1065 L + V L PT RA + AG A T+ ++ Q + NT Sbjct: 66 LQQKS----VLLAPTGRAAKVFSAYAGHPAFTIHKKIYRQQSFSNELSNFSINDNLATNT 121 Query: 1066 LFLLDESSMVGN-----------TDMARAYALIAAG-GGRAVASGDTDQLQAIA---PGQ 1110 LF++DE+SM+ N + + +G G R + GDT QL + Sbjct: 122 LFIVDEASMISNEGLSGSMFGTGRLLDDLVQFVYSGQGCRLLLMGDTAQLPPVGEELSPA 181 Query: 1111 PFRLQQTRSAADVAI--MKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEG 1168 F +V + ++VRQ V+ S + Sbjct: 182 LFADALKGYGLEVREIDLTQVVRQ-------------------------VQESGILWNAT 216 Query: 1169 AWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTL 1228 + + + K+ ++ G + Y+ + ++T+ Sbjct: 217 QLRQLIAEDDCYSLPKIKITGFPDIKLVPGIELIEELTNCYDH----------DGMDETI 266 Query: 1229 IVTHLNEDRRVLNSMIH-DVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDAL 1287 +V N+ + N+ I + + EL +++ N + + + + A+ Sbjct: 267 VVCRSNKRANLYNNGIRAQILWREDELNTGDMLMIAKNNYYWTE-KYKEMDFIANGEIAV 325 Query: 1288 VLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRF 1347 V I G + +TL+ + N + + + D Sbjct: 326 VRRVRRTREIYGFRFAE--VTLRFPDQNDFELDANLLLDTLHS------------DSPAL 371 Query: 1348 TKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQG 1407 K D +R + +TV D D + + P + + AYAIT H AQG Sbjct: 372 PKEDNDRLF-----YTVLEDYIDIPNKRDRMKKMKADPHYNALQ--VKYAYAITCHKAQG 424 Query: 1408 ASETFAIALEGTEGNRKLMAG-FESAYVALSRMKQHVQVY 1446 +G + L F Y A +R + + + Sbjct: 425 GQWQNVFLDQGYMTDEYLTPDYFRWLYTAFTRATKTLYLV 464 >UniRef50_Q1WTZ7 Exodeoxyribonuclease V alpha chain n=2 Tax=Lactobacillus salivarius RepID=Q1WTZ7_LACS1 Length = 824 Score = 141 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 116/748 (15%), Positives = 230/748 (30%), Gaps = 177/748 (23%) Query: 736 QVASVSEDAMTVVVPGRAEPATLPVSDSPFTALK--LENGW--------VETPGHSVSDS 785 V + DA+ V+ + L +S+ ++K L+ + + + G + + + Sbjct: 119 IVKKLGVDAIDVLNNDMDKLEELGLSEKQKDSIKKVLKENYGIDKIIIELNSLGFTSTMA 178 Query: 786 ATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAG 845 ++ + T ++ + R D+ S + A++ R Sbjct: 179 GRIYNNYTNSTLEIIHEDPY-RLSVDIDGISFTKADQIAQQFGFASDSPGRI-----RGA 232 Query: 846 ETSLETAISHQKSALHTPAQQAIHLALPVVES-KKLAFSMVDLLTEAKSFAAEGTGFTEL 904 +++ + + L ++ES + A + + E ++ Sbjct: 233 IFQSLYDLTYATGNTYVELNPLVTETLKLLESNRNEAIDPQLVADQLIKLTEEDKIKSD- 291 Query: 905 GGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSI---LRHILEGKEAVMP----- 956 + SR + AE +I L +L+ + +P Sbjct: 292 -----------------------DNKVYSRTFFNAEWNIAENLYRLLKSGNSDLPNNDAL 328 Query: 957 ---LMERVPGELMEKLTSGQRAATRMILETS----------DRFTVVQG----YAGVGKT 999 L+ + +L S Q+ A + +++ + T++ G YA Sbjct: 329 LDKLLIKAEDQLGIDYDSEQKRAIKDAIKSPVFLLTGGPGTGKTTIINGIVAVYA----- 383 Query: 1000 TQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM-RSAGVDAQTLASFLH-DTQLQQRSG 1057 + + + ++ PT RA M S G+ A T+ L + + Sbjct: 384 -LLNDIDLDIGKYDKDNPFPILLAAPTGRAAKRMAESTGLPASTIHRMLGINAHDDKLPE 442 Query: 1058 ETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQT 1117 + + L ++DE+SMV M I + + + GD +QL ++ PGQ F Sbjct: 443 DIQELEGALLIVDETSMVDTLIMDLLLNSIPSH-MQVIFVGDRNQLPSVQPGQVFSDLLV 501 Query: 1118 RSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVT 1177 A + +I RQ + ++ S+K ++P + + Sbjct: 502 SDALPKKELTKIYRQ-------------GEGSSIINLAHSIKNGELPADFTKAQSDRAFI 548 Query: 1178 EFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDR 1237 Q E KA L D + + Y G N Sbjct: 549 PCEAGQLTSAVEQVVKAALNKGNSKDD----IQVLAPMYRG---------------NVGI 589 Query: 1238 RVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRI 1297 LN+++ + +LN AN R E V+ + RI Sbjct: 590 NRLNTILQE----------------LLNPANPRQKE--------------VIFNEQVFRI 619 Query: 1298 AGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYV 1357 D ++ L + P V G I G + TK D++ + Sbjct: 620 -----GDRVLHLVN--------DPENNVFNG-------DIGKIVGINIPKTKKDKKGEQI 659 Query: 1358 ANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALE 1417 + G+ VT ++ LAY ++ H +QG F I + Sbjct: 660 ------IADFDGNEVTFDKKDWI------------NLTLAYCMSIHKSQG--SEFPIVVL 699 Query: 1418 GTEGNRKLMAGFESAYVALSRMKQHVQV 1445 + M Y ++R KQ + + Sbjct: 700 AMLPQYQRMFARNLLYTGITRAKQKLVL 727 Score = 57.2 bits (136), Expect = 5e-06, Method: Composition-based stats. Identities = 53/400 (13%), Positives = 109/400 (27%), Gaps = 69/400 (17%) Query: 463 VQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTP-------GSTVIVDQGEKLSL 515 + + A R+ M + L I + P G+ +IVD+ + Sbjct: 403 ILLAAPTGRAAKRMAESTGLPASTIHRMLGINAHDDKLPEDIQELEGALLIVDETSMVDT 462 Query: 516 KETLTLLDGAARHNVQVLITDSGQRTGT--GSALMAMKDAGVNTYRWQGGEQRPATIISE 573 LL+ H + + D Q G + + + R S Sbjct: 463 LIMDLLLNSIPSHMQVIFVGDRNQLPSVQPGQVFSDLLVSDALPKKELTKIYRQGEGSSI 522 Query: 574 PD--RNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTM 631 + +++ L DF + E LT A+ +K G + + Sbjct: 523 INLAHSIKNGELPADFTKAQSDR------AFIPCEAGQLTSAVEQVVKAALNKGNSKDDI 576 Query: 632 TALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQ 691 L+P I+R+ L Sbjct: 577 QVLAP---------------------------MYRGNVGINRLNTILQEL---------- 599 Query: 692 VVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASV-------SEDA 744 + ++ +F + + G+R+ P V GD ++ + + Sbjct: 600 -LNPANPRQKEVIFNEQVFRI--GDRVLHLVNDPENNVFNGDIGKIVGINIPKTKKDKKG 656 Query: 745 MTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMA---MDNAT 801 ++ T D + L L V A + Q N Sbjct: 657 EQIIADFDGNEVTFDKKD--WINLTLAYCMSIHKSQGSEFPIVVLAMLPQYQRMFARNLL 714 Query: 802 LNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIK 841 G+ R+ + + L ++ R + ++ T + ++I+ Sbjct: 715 YTGITRAKQKLVLLGNVSSFRQSAEIISLNRKTGLLKRIR 754 >UniRef50_B1VNB9 Putative exodeoxyribonuclease-like protein n=1 Tax=Streptomyces griseus subsp. griseus NBRC 13350 RepID=B1VNB9_STRGG Length = 1303 Score = 141 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 147/773 (19%), Positives = 239/773 (30%), Gaps = 142/773 (18%) Query: 850 ETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEIN 909 I +A+ AQ+ H LPV + + + LT A A + T LG Sbjct: 525 RRRIDAAMTAVLLRAQEEGHTLLPVEQMAE----RLGQLTVAVPLATDETILRPLGLAPE 580 Query: 910 AQIKR---------GDLLYVDVAKGYGTGLLVSRASYE---AEKSILRHILEGKEAVMP- 956 A + L VD+A G L S A E+ L + +GK +P Sbjct: 581 ALLDSDSHDEPEVWSQLRRVDLASGKAAYKLASAALRRDFIRER--LNQLRDGKPHCVPA 638 Query: 957 ------------LMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRA 1004 L+ +L + + AA I R T+V G AG GKTT Sbjct: 639 DLAKTLDTALSGLVAAADSDLEARARVEKAAAFSEIF--HRRVTIVNGPAGTGKTT---- 692 Query: 1005 VMSAVNMLPESERPRVVGLGPTHRA-VGEMRSAGVDAQTLASFL-HDTQLQQRSGETPDF 1062 ++ A+ E R ++ L PT +A V + G A TLA FL H + G Sbjct: 693 LIQALAKRSEVTRRGLLLLAPTGKARVQLEQKVGYQALTLAQFLRHSDRYDDVHGRYLTL 752 Query: 1063 SNT------LFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQ 1116 + ++DE+SM+ DM A R + GD QL I G+PF + Sbjct: 753 PDGRRISVGTVVVDEASML-TEDMLAALLDAVEITERLILVGDPRQLPPIGAGRPFVDLE 811 Query: 1117 TRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSV 1176 R+ P+ S PR WA + Sbjct: 812 -------------RRRRPD------------------------HSNWPRVAPGWAELTVL 834 Query: 1177 TEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNED 1236 LA A + K + + A TL H N Sbjct: 835 HRQQGHTRDDLALAHWYSGDKRSDDAEEV----------WEKLRTRAPMATLKAVHWNG- 883 Query: 1237 RRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHR---DALVLVDNV 1293 R ++ DV + + E D + + D + Sbjct: 884 -RPAARVLDDVLREEFTVTDELSFTHSYGATTRTDAKGNEYPNYTHASGSCDRWQALSPT 942 Query: 1294 YHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTP-DTIRVGTGDRMRFTKS-- 1350 + G + + + R ++ + + + P ++ GD++ T++ Sbjct: 943 RGQTHGTVELNRYL---KQTYRRRALADAQLIKSRRRVPQPLGPEQIVVGDKVVNTRNQY 999 Query: 1351 ----------DRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQ-------- 1392 +R YVAN V S ++ ++ + + Sbjct: 1000 LRAYRPSTGKTEDRSYVANGELGVVTGQLKSKKMTGAPWQTQVEFSSQPDLRFAAQRGLD 1059 Query: 1393 ---HIDLAYAITAHGAQGASE-TFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTD 1448 ++LA+A+T H +QG+ T + L E Y AL+R + V + + Sbjct: 1060 DDPGLELAWALTVHKSQGSEFGTVVLMLPAHVSG----ISRELLYTALTRQTRKVIICHE 1115 Query: 1449 NRQGWTDAINNAVQKGTA---HDVFEPKPDREVMNAERLFS---TARELRDVAAGRAVLR 1502 + TA D+ P V + + A + G V Sbjct: 1116 GPLEDLRELAQPTASDTARRLTDLTRPPEPVVVHDRQGRRIGCFDANLIHITHFGLPVSS 1175 Query: 1503 QAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLR 1555 + + D R +Y QP R+GK+ +TTDD + Sbjct: 1176 KNEVIIADLLHRLARGRFEYEQPLTG-----RDGKTKFPDFT-ITTDDPDRPI 1222 Score = 69.1 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 90/670 (13%), Positives = 180/670 (26%), Gaps = 97/670 (14%) Query: 280 TLKETGFDIRAYRDAADQRADLRTLTP----GPASQDGPDVQQAVTQAIAGLSERKVQFT 335 +E G + A++ L P + +A+ + + + ++ Sbjct: 538 RAQEEGHTLLPVEQMAERLGQLTVAVPLATDETILRPLGLAPEALLDSDSH--DEPEVWS 595 Query: 336 YTDVLARTVGILPPENGVIERARAGIDEAISR-----EQLIPLDREKGLFTSGIHVLDEL 390 + G + R I E +++ +P D K L T+ Sbjct: 596 QLRRVDLASGKAAYKLASAALRRDFIRERLNQLRDGKPHCVPADLAKTLDTA-------- 647 Query: 391 SVRALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVA 450 + + + + A A + + IV+G G G+ + Sbjct: 648 -----------LSGLVAAADSDLEARARVEKAAAFSEIFHRRVTIVNGPAG-TGKTTLIQ 695 Query: 451 ELVMMAREQGREVQIIAADRRSQMNMKQDERLSG-------------ELITGRRQLLEGM 497 L + R + ++A ++++ ++Q + + GR L Sbjct: 696 ALAKRSEVTRRGLLLLAPTGKARVQLEQKVGYQALTLAQFLRHSDRYDDVHGRYLTLPDG 755 Query: 498 AFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR--TGTGSALMAMKDAGV 555 TV+VD+ L+ LLD +L+ D Q G G + ++ Sbjct: 756 RRISVGTVVVDEASMLTEDMLAALLDAVEITERLILVGDPRQLPPIGAGRPFVDLERRRR 815 Query: 556 NTYRWQGGEQRPATIISEPDRNVRYA----RLAGDFAASVKAGEESVAQVSGVREQAILT 611 + ++ R + LA ++ ++ + E+ T Sbjct: 816 PDHSNWPRVAPGWAELTVLHRQQGHTRDDLALAHWYSGDKRSDDAEEVW-----EKLR-T 869 Query: 612 QAIRSELKTQGVLGLPEVTM--TALSPVWLDSRSRYLRDMY-------RPGMVMEQWNPE 662 +A + LK G P + L + + Y G + Sbjct: 870 RAPMATLKAVHWNGRPAARVLDDVLREEFTVTDELSFTHSYGATTRTDAKGNEYPNYTHA 929 Query: 663 TRSHDRYVIDRVTAQSHSLT------LRDAQGETQVVRISSLDSSWSLFRP-EKMPVADG 715 + S DR+ T T L+ + + S + +P + G Sbjct: 930 SGSCDRWQALSPTRGQTHGTVELNRYLKQTYRRRALADAQLIKSRRRVPQPLGPEQIVVG 989 Query: 716 ERLRVTGKI-----PGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALK- 769 +++ T DR VA+ +T + + + F++ Sbjct: 990 DKVVNTRNQYLRAYRPSTGKTEDRSYVANGELGVVTGQLKSKKMTGAPWQTQVEFSSQPD 1049 Query: 770 --------------LENGWVETPGHSVSDS----ATVFASVTQMAMDNATLNGLARSGRD 811 LE W T S + + L R R Sbjct: 1050 LRFAAQRGLDDDPGLELAWALTVHKSQGSEFGTVVLMLPAHVSGISRELLYTALTRQTRK 1109 Query: 812 VRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQK-SALHTPAQQAIHL 870 V + E S T TR E + ++ H Sbjct: 1110 VIICHEGPLEDLRELAQPTASDTARRLTDLTRPPEPVVVHDRQGRRIGCFDANLIHITHF 1169 Query: 871 ALPVVESKKL 880 LPV ++ Sbjct: 1170 GLPVSSKNEV 1179 >UniRef50_Q5HXP7 Conjugal transfer protein TraA n=1 Tax=Gluconobacter oxydans RepID=Q5HXP7_GLUOX Length = 1067 Score = 140 bits (353), Expect = 4e-31, Method: Composition-based stats. Identities = 153/881 (17%), Positives = 280/881 (31%), Gaps = 124/881 (14%) Query: 23 YYVLGSMGERWAG----RGAEQLGLQGSVDK--DVFTRLLEGRLPDGADLSRMQDGSNRH 76 YY WA R A QLG+ + + RL EG+ D + +NR Sbjct: 51 YYTGRDARGSWAPDMSERIASQLGIDVTTRPTDEALARLFEGKRADTGE-KWAGAHANRE 109 Query: 77 RPGYDLTFSAPKSVSMMAMLGGDKR----LIDAHNQAVDFAVRQVEALASTRVMTDGQSE 132 G D T + KSV++ A K + A +QA D A+ + G Sbjct: 110 ISGIDFTAAPDKSVTLAAEFASTKAEEALIWSAIHQANDRAMAFIAKEIGIARRGKGGVS 169 Query: 133 TVLTGNLVMALFNHDTSR--------------------DQEPQLHTHAVVANVTQ-HNGE 171 G++ F H T+R +PQ H H ++ N +G Sbjct: 170 YNEGGDVGWVSFRHYTARPVMKIQDGAQGPTAAVEVLVPGDPQAHIHNIMFNAVATESGH 229 Query: 172 WKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPV 231 +L S +V FG ++ +L ++ LG +V + + G+P Sbjct: 230 LGSLDSKRVTGMT--------SHMFGGYFQAELASELRKLGIRVDVDARGKAVVLNGIPE 281 Query: 232 EA---FSGRSQTIR--------------EAVGEDASLKSRDVAALDTRKSKQHVDPEIKM 274 EA FS RS+ +A+ + K A L R +K E + Sbjct: 282 EARELFSKRSKQAERMAKAFVKRQGGDWKAMSAEQKFKILHQANLTYRSNKYTGRNERDI 341 Query: 275 AEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQ-AIAGLSERKVQ 333 W + E G+ D++ L + G + + A + +R Sbjct: 342 --WREEADEIGWHHDTV--LTDEKTVLLSQAERFEKAYGIAAKMLADEFRTAAVIDRDAF 397 Query: 334 FTYTDVLARTVGILPPENG-----VIERARAGIDEAISREQLIPLDREKGLFTSGIHVLD 388 T+ GI E+ +I+ ID + R D + TS L+ Sbjct: 398 RTHAAHGLIAAGIEGMEDVERVADMIQERGIEIDGQLVRFLEREQDGRLRVATSAQIALE 457 Query: 389 ELSVRALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQG-------- 440 + R ++ + + D A LA ++ G Sbjct: 458 KDMARLAGLSARTRDGALSDEQIAAAVARSGLDFTREPAHGAAQLAAINALGQAGGLGFL 517 Query: 441 ---GAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRR--QLLE 495 +G+ + LV +E GR V A R +K +T Sbjct: 518 IGVAGSGKTTLLKPLVDAWQEDGRTVIGAAIAWRQADALKDAGISQTYAMTPLLDGLAQG 577 Query: 496 GMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSG---QRTGTGSALMAMKD 552 + S +++D+ ++S ++ L +L + + Q G A+ + Sbjct: 578 KIDLDRQSVLVLDEVSQVSPRQLLEILQLQQEKGFALRVVGDREQAQAIEAGDAVELL-- 635 Query: 553 AGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQ 612 R E RP + + ++ R ++A + ++ ++Q +++A + + Sbjct: 636 -----LRVMPKEARPELLSTIRQKSARGRQIA----SMFRSPGRDLSQTEDEQKKADIAR 686 Query: 613 AIRSEL---KTQGVL----GLPEVTMTALSPVWLDSRSRYLRDMYRPGMVME-QWNPETR 664 A R + + G + G + + ++ ++L R + G+ M N + Sbjct: 687 A-REAIDMKRKDGTIRLVGGDHDQVVEQIADLYLRRRDMLTQAGSERGITMSAPTNEDVM 745 Query: 665 SHDRYVIDRVTAQSH------SLTLRDAQGETQVVRISSLDSSWSLFRPE--KMPVADGE 716 R V DR+ + D +G T + ++ + LF +M A G Sbjct: 746 DLSRAVRDRLRKRGEIGQAEIVKAAIDQRGVTYELPLA-VGDRVRLFAKTSVRMETAHGR 804 Query: 717 RLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPA----TLPVSDSPFTALKLEN 772 R R G S GD V S++ + + E L + L + Sbjct: 805 RWRDLG-------SNGDFTTVKGWSDEGLVLQNAKGREGLVPWTRLADPKTGRVRLGFGH 857 Query: 773 GWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVR 813 V+ ++ + + R V Sbjct: 858 AMTVDAAQGVTSD-EHINAMPRGSSAMTGFTSYVAESRHVH 897 Score = 114 bits (285), Expect = 4e-23, Method: Composition-based stats. Identities = 114/701 (16%), Positives = 216/701 (30%), Gaps = 117/701 (16%) Query: 780 HSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLA---RHPSFTVV 836 + + + A S + + R G D + S+ + + + R +T Sbjct: 277 NGIPEEARELFSKRSKQAERMAKAFVKRQGGDWKAMSAEQKFKILHQANLTYRSNKYTGR 336 Query: 837 SEQIKTRAGETSL----ETAISHQKSALHTPAQ---QAIHLALPVVES--KKLAFSMVDL 887 +E+ R + +T ++ +K+ L + A+ +A +A ++ + A D Sbjct: 337 NERDIWREEADEIGWHHDTVLTDEKTVLLSQAERFEKAYGIAAKMLADEFRTAAVIDRDA 396 Query: 888 LTEAKSFAAEGTGFTELGG--EINAQIKR------GDLLYVDVAKGYGTGLLVSRASYEA 939 + G + + I+ G L+ + G + + A Sbjct: 397 FRTHAAHGLIAAGIEGMEDVERVADMIQERGIEIDGQLVRFLEREQDGRLRVATSAQIAL 456 Query: 940 EKSILR------HILEGK---EAVMPLMERVPGELMEKLTSG--QRAATRMILETSDRFT 988 EK + R +G E + + R + + G Q AA L + Sbjct: 457 EKDMARLAGLSARTRDGALSDEQIAAAVARSGLDFTREPAHGAAQLAAIN-ALGQAGGLG 515 Query: 989 VVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVDAQTLASFLH 1048 + G AG GKTT + ++ A + + V+G R ++ AG+ +QT A Sbjct: 516 FLIGVAGSGKTTLLKPLVDA----WQEDGRTVIGAAIAWRQADALKDAGI-SQTYAMTPL 570 Query: 1049 DTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAP 1108 L Q G+ ++ +LDE S V + L G GD +Q QAI Sbjct: 571 LDGLAQ--GKIDLDRQSVLVLDEVSQVSPRQLLEILQLQQEKGFALRVVGDREQAQAIEA 628 Query: 1109 GQPFRLQQTRSAADVA-IMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQE 1167 G L + + +RQ + S+ P + Q Sbjct: 629 GDAVELLLRVMPKEARPELLSTIRQKSARGRQIASMFR-------------SPGRDLSQT 675 Query: 1168 GAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQT 1227 + + + + K + + + + RD + R T Sbjct: 676 EDEQKKADIARAREAIDMKRKDGTIRLVGGDHDQVVEQIADLYLRRRDMLTQAGSERGIT 735 Query: 1228 LIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDAL 1287 + NED L+ + D K GE+G+ +++ ++ + Sbjct: 736 M-SAPTNEDVMDLSRAVRDRLRKRGEIGQAEIVKAAIDQRGVT----------------- 777 Query: 1288 VLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRF 1347 AV + V L+ ++R+ T R+ Sbjct: 778 -------------------------------YELPLAVGDRVRLFAKTSVRMETAHGRRW 806 Query: 1348 TKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQ-----HIDLAYAITA 1402 R+ G TV S + + L + + + P A+ + +A+T Sbjct: 807 ----RDLG-SNGDFTTVKGWSDEGLVLQNAKGREGLVPWTRLADPKTGRVRLGFGHAMTV 861 Query: 1403 HGAQGASET-FAIALEGTEGNRKLMAGFESAYVALSRMKQH 1442 AQG + A+ YVA SR Sbjct: 862 DAAQGVTSDEHINAMPRGSSAMTGFTS----YVAESRHVHR 898 >UniRef50_C6X7W3 ATP-dependent exoDNAse (Exonuclease V) alpha subunit-helicase superfamily I member-like protein n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X7W3_METSD Length = 1188 Score = 140 bits (353), Expect = 4e-31, Method: Composition-based stats. Identities = 85/546 (15%), Positives = 170/546 (31%), Gaps = 81/546 (14%) Query: 845 GETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMV-----------DLLTEAKS 893 G + + I ++K + A+ + + E K L L+ E Sbjct: 498 GGSIINKTIENKKIHEALAPKIAVDPGIGMKEKKFLEIIETLTSTTPYINKNALVYEIAK 557 Query: 894 FAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEA 953 + G ++ E+ A+ +LL + E + + + Sbjct: 558 SSPVGFNAQKMADELIAKSLESELLVATGTLSKTQTAYTTWELINKEYENIELMKKLHNT 617 Query: 954 VMP-----------LMERVPG--ELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTT 1000 L+E P + K Q + + G G GK+ Sbjct: 618 EQKYKIYNVKKEIDLVEDKPEYKDKGIKSNKEQIEMIESVFSDRKG-QICIGLPGTGKSL 676 Query: 1001 QFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGV--DAQTLASFLHDTQLQQRSGE 1058 + + R +G T++ + + +T+ LHD + SG+ Sbjct: 677 SIK----ICTEIAHKHGFRTIGCAFTNKVSTALDDETLCDVVKTVDKLLHDIE----SGK 728 Query: 1059 TPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTR 1118 N + +DE+S +G + + + V GD +Q+ +I G Sbjct: 729 LKLNGNDIVFVDEASQIGTRQYNKLLNAVVDAKAKIVLIGDPNQINSINTGNTLNEFLRD 788 Query: 1119 SAA--DVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSV 1176 S +V + +I RQ E AL+ E+ +V + E + Sbjct: 789 SEIRDNVVFLTDIRRQKNE--------------TALTVAETSSLKEVYKDEATFRRVKK- 833 Query: 1177 TEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNED 1236 S K+ ++A F T+ EAI + Y + +++ LI NE Sbjct: 834 ---EGSHVEKVFTLLEQAGCVHNKFITNTETI-EAISKAYINNVNDYKDKLLI-AATNES 888 Query: 1237 RRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHR 1296 +N I D R + G++ + + ++ G+ + ++ + + Sbjct: 889 IDRINDKIQDRRIELGQVVGKPYIAE--DSKFFYKGDRIVME-----KNTKEYKNGDFGT 941 Query: 1297 IAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGY 1356 I I IT++ T+ P I++ G T +++ +G Sbjct: 942 ITNIDPTTNKITIEFDNSKTKTFD------------NPKKIKLSYG----IT-AEKAQGL 984 Query: 1357 VANSVW 1362 N Sbjct: 985 TTNDTL 990 Score = 68.3 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 65/546 (11%), Positives = 151/546 (27%), Gaps = 108/546 (19%) Query: 274 MAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQA-VTQAIAGLSERKV 332 + + +KE + + L P A G +++ + I L+ Sbjct: 485 RNKVWKVIKERKKGGSIINKTIENKKIHEALAPKIAVDPGIGMKEKKFLEIIETLTSTTP 544 Query: 333 QFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIP---LDREKGLFTSGIHVLDE 389 ++ P + A I +++ E L+ L + + +T+ + E Sbjct: 545 YINKNALVYEIAKSSPVGFNAQKMADELIAKSLESELLVATGTLSKTQTAYTTWELINKE 604 Query: 390 LSVRALSRDIMKQNRVT----------------VHPEKSVPRTAGYSDAVSVLAQDRPSL 433 L + + + + +K + + + + DR Sbjct: 605 YENIELMKKLHNTEQKYKIYNVKKEIDLVEDKPEYKDKGIKSNKEQIEMIESVFSDRKGQ 664 Query: 434 AIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQL 493 + G G+ + +A + G A + + DE L + T + L Sbjct: 665 ICIGLPG--TGKSLSIKICTEIAHKHGFRTIGCAFTNKVSTAL-DDETLCDVVKTVDKLL 721 Query: 494 LE----GMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQ-VLITDSGQ--------- 539 + + V VD+ ++ ++ LL+ + VLI D Q Sbjct: 722 HDIESGKLKLNGNDIVFVDEASQIGTRQYNKLLNAVVDAKAKIVLIGDPNQINSINTGNT 781 Query: 540 ---------------------RTGTGSALMAMKDAGVN-------TYRWQGGEQRPATII 571 R +AL + + + T+R E + Sbjct: 782 LNEFLRDSEIRDNVVFLTDIRRQKNETALTVAETSSLKEVYKDEATFRRVKKEGSHVEKV 841 Query: 572 ------------SEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELK 619 ++ + +V ++ + + + I+ Sbjct: 842 FTLLEQAGCVHNKFITNTETIEAISKAYINNVNDYKDKLLIAATNESIDRINDKIQDRRI 901 Query: 620 TQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGM--VMEQWNPETRSHDRYVIDRVTAQ 677 G + + G VME+ E ++ D I + Sbjct: 902 ELGQVVGKPYIAE-------------DSKFFYKGDRIVMEKNTKEYKNGDFGTITNIDPT 948 Query: 678 SHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQV 737 ++ +T+ +T+ P+K+ ++ G +T ++ D L Sbjct: 949 TNKITIEFDNSKTKTFD-----------NPKKIKLSYG----ITA-EKAQGLTTNDTLVY 992 Query: 738 ASVSED 743 S++ Sbjct: 993 GEASQN 998 >UniRef50_C5V224 AAA ATPase n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V224_9PROT Length = 772 Score = 140 bits (353), Expect = 4e-31, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 100/277 (36%), Gaps = 16/277 (5%) Query: 942 SILRHILEG--KEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKT 999 ++L +G + V + L +LT QR A + + G AG GKT Sbjct: 324 ALLAAWEKGLARGRVAEALTAHESSLEFELTGEQREAVISAVMAP--VCCISGGAGTGKT 381 Query: 1000 TQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM-RSAGVDAQTLASFLHDTQLQQRSGE 1058 T A++ N++ E + RA M S G AQT+A F+ ++S Sbjct: 382 TILNAILGVFNVIAE--GIPCYQMAVAGRAAQRMAESTGRPAQTIAKFIVTHLRDKKSDL 439 Query: 1059 TPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTR 1118 P+ + ++DE+SMV M + ++ + R + GD QL + G F + Sbjct: 440 PPNI---ILVIDEASMVDLLSMYKLIGILPSAT-RILFVGDASQLPPVGDGLIFHAL-SD 494 Query: 1119 SAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTE 1178 + + ++ RQ+ ++ E L + + S + + + S+ Sbjct: 495 TPFPFFKLTQVKRQSE--LSGIHRFATAIRESELELPKRTQKSLLESDDCSIESNSSINR 552 Query: 1179 FSH--SQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIV 1213 + + + KGE D + Sbjct: 553 LVELWLEAGGIGNIVLSPIKKGELGVDNINAQLQRAA 589 Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 62/469 (13%), Positives = 132/469 (28%), Gaps = 62/469 (13%) Query: 395 LSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVM 454 L+R + + T +AV ++ + +SG G G+ + ++ Sbjct: 333 LARGRVAEALTAHESSLEFELTGEQREAV--ISAVMAPVCCISGGAG-TGKTTILNAILG 389 Query: 455 MAR--EQGREVQIIAADRRSQMNMKQDERLSGELITGR---RQLLEGMAFTPGSTVIVDQ 509 + +G +A R+ M + + I + P +++D+ Sbjct: 390 VFNVIAEGIPCYQMAVAGRAAQRMAESTGRPAQTIAKFIVTHLRDKKSDLPPNIILVIDE 449 Query: 510 GEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMKDAGVNTYRWQGGEQRPAT 569 + L L+ + + D+ Q G L + P Sbjct: 450 ASMVDLLSMYKLIGILPSATRILFVGDASQLPPVGDGL---------IFHALSDTPFPFF 500 Query: 570 IISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEV 629 +++ R + + FA +++ E + R Q L L++ Sbjct: 501 KLTQVKRQSELSGI-HRFATAIRESELEL----PKRTQKSL-------LESDDCSIESNS 548 Query: 630 TMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQG- 688 ++ L +WL++ V+ +D + AQ L+ A G Sbjct: 549 SINRLVELWLEAGGIGNI-------VLSPIKKG-----ELGVDNINAQ-----LQRAAGL 591 Query: 689 ETQVVRISSLDSSWSLF-RPEKMPVADGERLRVTGKIPG--LRVSGGDRLQVASVS---- 741 + W + + +G+ + V + GD + V Sbjct: 592 NRPALYYRDEFRGWISWITSTGAQLLEGDPILVVVNNYDEEADIRNGDLGIITEVFDMPK 651 Query: 742 -EDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSV--SDSATVFASVTQMAMD 798 E+ V+ + V+ L+L + S +D Sbjct: 652 YENGALGVMEING--VAIFVTSDILVKLQLGYAVTIHKSQGSEWPTCFVMLPSEASHMID 709 Query: 799 NATLN-GLARSGRDVRLYSS--LDETRTAEKLARHPSFTVVSEQIKTRA 844 L + R + + + L E T + E+I A Sbjct: 710 QTLLYTAVTRPIKRLVMIGDNCLIEQAIRRGSLALERKTYLRERILVAA 758 Score = 47.9 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 21/118 (17%), Positives = 42/118 (35%), Gaps = 8/118 (6%) Query: 1338 RVGTGDRMRFTKS--DRERGYVANSVWTVTAVSG----DSVTLSDGQQTREIRPGQEQAE 1391 ++ GD + + D E + +T V ++ L + Sbjct: 615 QLLEGDPILVVVNNYDEEADIRNGDLGIITEVFDMPKYENGALGVMEINGVAIFVTSDIL 674 Query: 1392 QHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDN 1449 + L YA+T H +QG+ + +E + M Y A++R + + + DN Sbjct: 675 VKLQLGYAVTIHKSQGSEWPTCFVMLPSEASH--MIDQTLLYTAVTRPIKRLVMIGDN 730 >UniRef50_B0MXQ8 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MXQ8_9BACT Length = 471 Score = 140 bits (353), Expect = 5e-31, Method: Composition-based stats. Identities = 91/524 (17%), Positives = 167/524 (31%), Gaps = 100/524 (19%) Query: 957 LMERVPGELMEKLTSGQRAATRMI---LETSD--RFTVVQGYAGVGKTTQFRAVMSAVNM 1011 + ++ ++ TSGQ+ + L SD V+ GYAG GKTT A++ A+ Sbjct: 6 IATQIYAKICFNTTSGQKKIIESLSEYLSESDPAAIFVLNGYAGTGKTTLIAALVGALKD 65 Query: 1012 LPESERPRVVGLGPTHRAVGEM-RSAGVDAQTLASFLHDTQLQQRSGETPDF-----SNT 1065 + V L PT RA + R +G A T+ ++ + Sbjct: 66 C----GIKPVLLAPTGRAAKVLSRYSGEPALTIHKRIYRQRTNADYESKFSLNINQERGA 121 Query: 1066 LFLLDESSMVGN-----------TDMARAYALIAAG-GGRAVASGDTDQLQAIA-----P 1108 +F++DE+SM+ N + + + G G R + GD QL I Sbjct: 122 VFIVDEASMLANGSSDGAIFGSGALLDDLVSYVRGGKGCRLILVGDDAQLPPIGVDYSPA 181 Query: 1109 GQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEG 1168 P + + E+VRQ E Sbjct: 182 LDP-KALSVYGEVVYTSLDEVVRQEAE-----------------------SGILFNATLV 217 Query: 1169 AWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTL 1228 E+ + E + + +++G F + Y+ R++T+ Sbjct: 218 RCMLENGICEVPRFR----MDFPDIEVVEGGEFMEKLQDCYDRY----------GRDETI 263 Query: 1229 IVTHLNEDRRVLNSMIHD-VREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDAL 1287 ++T N+ N I V E+ +++ V N + + + + D Sbjct: 264 VITRSNKRANRYNDGIRRYVLGAEEEIESGDLLMVVKNNYHFTERTEDCPMNFLANGDIA 323 Query: 1288 VLVD-NVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMR 1346 L + G +++ D + + + + +P Sbjct: 324 KLRRLRRFEDFYGFRFATAVLSFADYNDAELEC---KILLDTIASESPS----------- 369 Query: 1347 FTKSDRERGYVANSVWTVTAVSGDSVTLSDG-QQTREIRPGQEQAEQHIDLAYAITAHGA 1405 T+ + R + V D + + ++ +EIR + AYA+T H A Sbjct: 370 LTREESNRLFC--------EVEKDYLDIKSKLKRFKEIRENPHFNAVQVKFAYAVTCHKA 421 Query: 1406 QGASETFAIA---LEGTEGNRKLMAGFESAYVALSRMKQHVQVY 1446 QG L G E + M Y AL+R + + Sbjct: 422 QGGQWRAVFIDRCLFGDEPMTRDM--LRWLYTALTRATDKLYLV 463 >UniRef50_B7J7Z5 Helicase, RecD/TraA family n=1 Tax=Acidithiobacillus ferrooxidans ATCC 23270 RepID=B7J7Z5_ACIF2 Length = 711 Score = 140 bits (352), Expect = 5e-31, Method: Composition-based stats. Identities = 53/230 (23%), Positives = 83/230 (36%), Gaps = 13/230 (5%) Query: 908 INAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELME 967 I A+I+ + S E S+ I R P + Sbjct: 262 IVARIQVMQEAQQIATELGAPNRFASVRLSRMEISLAAKIRSLSGPAPKKTMRFPAGFVP 321 Query: 968 KLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTH 1027 Q A I + + ++ G G+GKTT + + RV PT Sbjct: 322 --DPTQIEALNQI--SDRKLAILAGGPGMGKTTLLKT----CAQSAVASGMRVALCAPTG 373 Query: 1028 RAVGEMRSA-GVDAQTLASFL--HDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAY 1084 RA M A G++A+T+ L L +R+ + P + ++DE SM+ + + Sbjct: 374 RAAKRMNEATGMEAKTIHRLLEMKRGGLAERNRDNPIEA-DWIIVDEVSMLDMELAWKLF 432 Query: 1085 ALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTP 1134 I A R + GD DQL ++ PGQ VA + +I RQ Sbjct: 433 DAIPAR-ARVLLVGDPDQLPSVGPGQVLADLIACGKVTVARLSKIFRQQA 481 Score = 74.1 bits (180), Expect = 5e-11, Method: Composition-based stats. Identities = 26/138 (18%), Positives = 52/138 (37%), Gaps = 3/138 (2%) Query: 1310 QDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVS- 1368 ++ T ++ A P R GD + T+++ + + TV A+ Sbjct: 548 RNGPLGTLKLNQALREAFNPDAGQPHRGRFRLGDWVIQTRNNYDLDVYNGDLGTVVAIEE 607 Query: 1369 GDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAG 1428 GD + + R +R + + +D AY +T H +QG F +M Sbjct: 608 GDEQAVVVDFEDRVVRYEDNEDLRDLDHAYCLTIHKSQGG--QFPGVAMVATTAHFVMLK 665 Query: 1429 FESAYVALSRMKQHVQVY 1446 Y ++R ++H+ + Sbjct: 666 RNLLYTGMTRAEKHLLLI 683 Score = 67.6 bits (163), Expect = 5e-09, Method: Composition-based stats. Identities = 57/347 (16%), Positives = 97/347 (27%), Gaps = 17/347 (4%) Query: 238 SQTIREAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQ 297 ++ I + + E R A R+ K H + A + L+ + + R Sbjct: 147 TRIIMQFLREVGIGPERSNAVW--RQFKDHPAIAGQPAVLVARLRNNPYRLIRVRGIGFS 204 Query: 298 RADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERA 357 AD G + V + + +E +T L L E+ Sbjct: 205 LADQAAGKLGIRADADYRVDAGIEHTLQTRTEDGHVWTPEPTLLGLCKELL--GVSQEKI 262 Query: 358 RAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTA 417 A I +Q+ F S E+S+ A R + + Sbjct: 263 VARIQVMQEAQQIATELGAPNRFASVRLSRMEISLAAKIRSL--SGPAPKKTMRFPAGFV 320 Query: 418 GYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMK 477 + L Q + G G+ + A G V + A R+ M Sbjct: 321 PDPTQIEALNQISDRKLAILAGGPGMGKTTLLKTCAQSAVASGMRVALCAPTGRAAKRMN 380 Query: 478 QDERLSGELITGRRQLLEGMAFTPGS-------TVIVDQGEKLSLKETLTLLDGAARHNV 530 + + + I ++ G +IVD+ L ++ L D A Sbjct: 381 EATGMEAKTIHRLLEMKRGGLAERNRDNPIEADWIIVDEVSMLDMELAWKLFD-AIPARA 439 Query: 531 QVLIT---DSGQRTGTGSALMAMKDAGVNTYRWQGGEQRPATIISEP 574 +VL+ D G G L + G T R P Sbjct: 440 RVLLVGDPDQLPSVGPGQVLADLIACGKVTVARLSKIFRQQAGSGIP 486 >UniRef50_Q2LTP5 Exodeoxyribonuclease V alpha chain n=22 Tax=Bacteria RepID=Q2LTP5_SYNAS Length = 753 Score = 140 bits (352), Expect = 5e-31, Method: Composition-based stats. Identities = 127/691 (18%), Positives = 222/691 (32%), Gaps = 139/691 (20%) Query: 774 WVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSF 833 ++++ G S + +A +F A+ N R D+ L R AEK+ Sbjct: 176 FLQSHGVSAAYAARIFRQYGNAAIKVLQENPY-RLATDIFGIGFLTADRIAEKMG----- 229 Query: 834 TVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVE--SKKLAFSMVDLLTEA 891 ++ AG + +S ++ + PA I +E K +A ++ + E Sbjct: 230 FARDSHLRAEAGILYVLHELS-EEGHVTYPAGPLIRKCEETLEIDRKFIAAALEGIAGER 288 Query: 892 KSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGK 951 + +G F E + + + L A L A E E Sbjct: 289 QIVIEDGASFPEALPDRTVSLAKYHLSETQTAARLRILLNTPSALREIE----------- 337 Query: 952 EAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNM 1011 + V +L L Q A R + ++ V+ G T +++A+ Sbjct: 338 --TEKAIAWVQEKLSLTLAHNQIEAIRAAVS--NKLLVITGGP----GTGKTTIINAIIR 389 Query: 1012 LPESERPRVVGLGPTHRAVGEMRSA-GVDAQTLASFLHDTQLQ--QRSGETPDFSNTLFL 1068 + + +++ PT RA M A G++A+T+ L + + + +T + + Sbjct: 390 IFSASGTKILLAAPTGRAAKRMSEATGMEAKTIHRLLEYSPQKGGFQKDDTSPLDCEMLI 449 Query: 1069 LDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKE 1128 +DE+SM+ M I + GD DQL ++ G+ V ++E Sbjct: 450 VDEASMIDIILMHHLVKAIPLPSS-FIMIGDGDQLPSVGAGRVLNDVIESGCLPVVELRE 508 Query: 1129 IVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLA 1188 I RQ E S+IN E + + PR + +L Sbjct: 509 IFRQARE-----SSIINNAHE--------INRGKFPRLQPPG--------------DRLD 541 Query: 1189 EAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVR 1248 + E D+ + L + G P ED +VL M H Sbjct: 542 DFYFVEQEDPEKVVDLIIRLVRERIPQRFGLDPM------------EDIQVLTPM-HRGL 588 Query: 1249 EKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLIT 1308 AG L V+ LN L+R + D ++ + N Y R Sbjct: 589 AGAGNL--NSVLQATLNPGKD---GLQRGGRFYLVGDKVMQIRNNYDR------------ 631 Query: 1309 LQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVS 1368 +Y GD R + D E T+ Sbjct: 632 ---------------------DVYN--------GDIGRIVRLDHEL-----QEATL-NFD 656 Query: 1369 GDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAG 1428 G V G + I L+YA++ H +QGA I ++ Sbjct: 657 GREVVYEYGD------------LEEIVLSYAVSVHKSQGAEYPAVIMPL--LMQHYMLLQ 702 Query: 1429 FESAYVALSRMKQHVQVYTDNRQGWTDAINN 1459 Y A++R K+ V + +++ A+ N Sbjct: 703 RNLLYTAVTRGKKLVVII-GSKKALAIAVRN 732 Score = 58.3 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 89/572 (15%), Positives = 176/572 (30%), Gaps = 74/572 (12%) Query: 194 IAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVEAFSGRSQTIREAVGEDASLKS 253 G + ++ E+ E + E+ G+ R IR A E ++S Sbjct: 117 KGIGPVMARRMVEKFGEATLEIIDQDSARLQEVEGIGE----KRITMIRRAWEEQREIRS 172 Query: 254 RDV--------AALDTRKSKQHVDPEIKMAE---WMQTLKETGFDIRAYRDAADQRADLR 302 + AA R +Q+ + IK+ + + G A++ R Sbjct: 173 IMIFLQSHGVSAAYAARIFRQYGNAAIKVLQENPYRLATDIFGIGFLTADRIAEKMGFAR 232 Query: 303 TLTPGPASQDGPDVQQAVTQAIAGLS---------ERKVQFTYTDVLARTVGILPPENGV 353 + + + + ++ + +A + + E + Sbjct: 233 DSHLRAEAGILYVLHELSEEG--HVTYPAGPLIRKCEETLEIDRKFIAAALEGIAGERQI 290 Query: 354 IERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDI-MKQNRVTVHPEKS 412 + A EA+ + + + L+ + R+I ++ V + S Sbjct: 291 VIEDGASFPEALPDRTVSLAKYHLSETQTAARLRILLNTPSALREIETEKAIAWVQEKLS 350 Query: 413 VPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRS 472 + +A+ ++ +V G G+ + ++ + G ++ + A R+ Sbjct: 351 LTLAHNQIEAIRAAVSNK---LLVITGGPGTGKTTIINAIIRIFSASGTKILLAAPTGRA 407 Query: 473 QMNMKQDERLSGELITGRRQLL-EGMAFTPGST-------VIVDQGEKLSLKETLTLLDG 524 M + + + I + + F T +IVD+ + + L+ Sbjct: 408 AKRMSEATGMEAKTIHRLLEYSPQKGGFQKDDTSPLDCEMLIVDEASMIDIILMHHLVKA 467 Query: 525 AARHNVQVLITDSGQ--RTGTGSALMAMKDAG---VNTYRWQGGEQRPATIISEPDRNVR 579 + ++I D Q G G L + ++G V R + R ++II+ R Sbjct: 468 IPLPSSFIMIGDGDQLPSVGAGRVLNDVIESGCLPVVELREIFRQARESSIINNAHEINR 527 Query: 580 YA---------RLAGDFAASVKAGEESV-AQVSGVREQ-------------AILTQAIRS 616 RL + + E+ V + VRE+ +LT R Sbjct: 528 GKFPRLQPPGDRLDDFYFVEQEDPEKVVDLIIRLVRERIPQRFGLDPMEDIQVLTPMHR- 586 Query: 617 ELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGM-VMEQWNPETRSHDRYVIDRVT 675 L G L V L+P D R Y G VM+ N R I R+ Sbjct: 587 GLAGAGNL--NSVLQATLNP-GKDGLQRG-GRFYLVGDKVMQIRNNYDRDVYNGDIGRIV 642 Query: 676 AQSHSLT--LRDAQGETQVVRISSLDSSWSLF 705 H L + G V L+ + Sbjct: 643 RLDHELQEATLNFDGREVVYEYGDLEEIVLSY 674 >UniRef50_UPI0001AEC2FF exodeoxyribonuclease V, alpha subunit n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC2FF Length = 735 Score = 139 bits (350), Expect = 8e-31, Method: Composition-based stats. Identities = 115/660 (17%), Positives = 221/660 (33%), Gaps = 73/660 (11%) Query: 839 QIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEG 898 +K AG T + ++ Q++ L + + + + +A + Sbjct: 62 YLKDIAGTTLFKEVVAEQEAVLAAETNVHSNNGAVGASKSPVEQTEQE---KAPKAGVDV 118 Query: 899 TGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLM 958 T L + + + + + V Y G L SR YE E+ + R++++ + A+ PL Sbjct: 119 PQLTPLLRIVKSALSNEQVAQLFV---YSNGKLYSRRYYEFEQEVARNVVK-RAALTPLS 174 Query: 959 ERVPGELMEKLTSG------------QRAATRMILETSDRFTVVQGYAGVGKTTQFRAVM 1006 + E +++L Q+ A L RF V+ G G GKT ++ Sbjct: 175 D-EASEKVKQLWPAIFPTETTDRQDWQQIAVAKSLM--QRFCVINGGPGTGKTYTVLRLL 231 Query: 1007 SAVNMLPESERPRVVGLGPTHRAVGEMRSA------GV--------------DAQTLASF 1046 A+ E+ ++V PT +A M + G+ DA TL Sbjct: 232 LALQACDEN--LKIVLAAPTGKAQQRMTESIMNSIDGLRGKLDDAVLNNVPTDAVTLHRL 289 Query: 1047 LH--DTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQ 1104 L + + + + + + ++DE+SMV M R + R GD DQL Sbjct: 290 LGLREHGVSTKFNQHNQLAADVLIVDEASMVDLALMTRIVRALPDH-ARLYFIGDADQLP 348 Query: 1105 AIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVP 1164 A+ G + AA + T L + V + + +P Sbjct: 349 AVELGNVLEQLVSTEAASFDENANVPNGTNSLNSNDNAFSLGGVPSLMRQHIATLCPHLP 408 Query: 1165 RQEGAWAPEHSVTEFSHSQEAKLAEAQ-QKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEA 1223 + V Q K A+ A+ +G+A + +A D T Sbjct: 409 LLPVDEQAKSYVATLQAPQRFKGQVAKVATAIQRGDASGALAAITDKASDNDETAGLNSN 468 Query: 1224 REQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETH 1283 + TL+ ++ L S +H ++ + + + + + Sbjct: 469 IDSTLV----SKTASRLQSGVH--LWPEHQVSGRD-LHQLAKESFLPIFDAGSAEEALNR 521 Query: 1284 RDALVLVDNVYHRIAGISKDDGLI------TLQDAEGNTRLISP----REAVAEGVTLYT 1333 + + + V G+ + L+ ++ EG+ P + + ++ Sbjct: 522 LNVVRWLTPVRKGGMGVEGLNNLVFDAIKHKIRKREGHFYQGQPIMIVKNHHPQRLSNGE 581 Query: 1334 PDTI-RVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSV--TLSDGQQTREIRPGQEQA 1390 I G + D + S +A +GDS TL+ Q R I + Sbjct: 582 VGVIWPDSKGKLYAWFYQDSQASGQNGSSQKASANAGDSADKTLAQKQALRSISLSRVPQ 641 Query: 1391 EQHIDLAYAITAHGAQGAS-ETFAIALEGTEGNRKLMAGFESA-YVALSRMKQHVQVYTD 1448 + + YA+T H +QG+ + L + + Y L+R K + +D Sbjct: 642 FETV---YAMTIHKSQGSEFNQVVLILPKPDSEKAANLFHRGLVYTGLTRAKDGCLIISD 698 >UniRef50_B1KNB0 AAA ATPase n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KNB0_SHEWM Length = 710 Score = 139 bits (350), Expect = 9e-31, Method: Composition-based stats. Identities = 63/274 (22%), Positives = 92/274 (33%), Gaps = 24/274 (8%) Query: 866 QAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQ---IKRGDLLYVDV 922 A+ L K F+ D + F+ T + I A + G + D Sbjct: 231 AAVEQVLNQWIGKGHTFAYRDDI-----FSDVITLLQDKQAAILALKKGLDNGTFIIADE 285 Query: 923 AKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILE 982 + TG+LV L + E+ LT Q A L Sbjct: 286 GTYHPTGMLVIERIIAKRFKKLAKLEAWSFQHDDAYEQACSSSEFPLTERQGEAVYNALN 345 Query: 983 TSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA-GVDAQ 1041 S + V G AG GKTT R+V++ L + + + RA MR + G + Sbjct: 346 YS--ISAVFGGAGTGKTTVIRSVVAGFEAL----GFEIHQIALSGRAAKRMRESTGRPTK 399 Query: 1042 TLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTD 1101 T+A+FL D + ++DESSMV M + + V GD D Sbjct: 400 TIAAFLRDEPVVTEKAA--------VIIDESSMVDANTMYQIITHTHDS-VKFVLIGDPD 450 Query: 1102 QLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPE 1135 QL I G Q + + RQ E Sbjct: 451 QLPPIGAGLVLHAIQDSKLVPKVTLDIVKRQDAE 484 Score = 68.7 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 61/383 (15%), Positives = 118/383 (30%), Gaps = 50/383 (13%) Query: 1131 RQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEA 1190 RQ + A+ I+ A +G +V S V E H + + + Sbjct: 335 RQGEAVYNALNYSISAVFGGAGTGKTTVIRSVVAGFEALGFEIHQIALSGRAAKRMREST 394 Query: 1191 QQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSM------- 1243 + D P+ +A V +A I+TH ++ + + Sbjct: 395 GRPTKTIAAFLRDEPVVTEKAAVIIDESSMVDANTMYQIITHTHDSVKFVLIGDPDQLPP 454 Query: 1244 IHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDN-----VYHRIA 1298 I + V L+ +D E ++ +V +H + Sbjct: 455 IGAGLVLHAIQDSKLVPKVTLDIVKRQDAESGIPGYSCDVKNGIVPERLSTGAVTFHEVP 514 Query: 1299 GISKDDGLITL---------------QDAEGNTRLISPREAVAEG-------VTLYTPDT 1336 ++ ++ L + G ++ E +L+ D Sbjct: 515 ETEINETIVGLYAEATNATQIIAATYKRENGGINALNHLEQTTLNNSSPELQFSLFNEDF 574 Query: 1337 I-RVGTGDRMRFTKSDRERGYVANSVWTVTAVSG-----DSVTLSDGQQTREIRPGQEQA 1390 I + GD + TK+D + ++ +T+V+ +TL D + I E Sbjct: 575 ILNLKVGDPILLTKNDIKLDIQNGTLGELTSVATTENGFGEITLDDNR----IINLDEAL 630 Query: 1391 EQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNR 1450 HI LAYAI+ H AQG+ + + Y A++R ++ V + + Sbjct: 631 LDHIQLAYAISLHKAQGSQFERIVIPIVPSK----LLDRGWIYTAITRAEKEVHLIGN-- 684 Query: 1451 QGWTDAINNAVQKGTAHDVFEPK 1473 K ++ K Sbjct: 685 AKLFKRYIKEPSKAHLRQIYLSK 707 >UniRef50_Q58914 Uncharacterized protein MJ1519 n=1 Tax=Methanocaldococcus jannaschii RepID=Y1519_METJA Length = 1175 Score = 139 bits (350), Expect = 1e-30, Method: Composition-based stats. Identities = 81/519 (15%), Positives = 170/519 (32%), Gaps = 97/519 (18%) Query: 961 VPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRV 1020 V E EK Q A +L +R ++ G AG GKTT + +M + + + + Sbjct: 557 VDNEEYEKALDMQTEAVVNLL--KNRVGILTGPAGTGKTTVIKTIMELMKEVLGLNKIYI 614 Query: 1021 VGLGPTHRAVGEMRSA---GVDAQTLASFLHDTQLQQRSGETP----------DFSNTL- 1066 L PT ++ + A+T+ ++ + G+ + + Sbjct: 615 --LTPTGKSAMVVNEKLNNLATAKTIHRYIAEEFKDYFEGDNYFILRLDKITGNDKKEID 672 Query: 1067 -FLLDESSMVGNTDMARAYALIAAGGGR-AVASGDTDQLQAIAPGQPFRLQQTRSAADVA 1124 ++DESSMV M R I + + GD +QL + G+PF Sbjct: 673 ALIIDESSMVDIETMGRLLGTIKLDNLKYLIFVGDINQLPPVGAGKPFYDIYN------- 725 Query: 1125 IMKEIVRQTPELREAVYSLINRDVER------ALSGLESVKPSQVPRQEGAWAPEHSVTE 1178 ++++ Q+ E V ++ + + E +K + ++ + Sbjct: 726 YLEKVNPQSICKLEIVLRADSKKIVELSKLFLDIDKEERIKILNEMFKNKETLGDNEIYR 785 Query: 1179 FSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRT----PEAREQTLIVTHLN 1234 + E ++K E I+++ ++ I+ Sbjct: 786 IKENIGGIEKEIITIEVVKDGNIKKSLENAIETILKENNTEDFFDFAVFNDKLQILVPT- 844 Query: 1235 EDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVY 1294 + GE G + + + ++ S + + +++N + Sbjct: 845 --------------KTKGEFGSYMINLFI-----------KQESKFIPDKYKNKMLENWF 879 Query: 1295 HRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRER 1354 + D +I +++ N + +Y + ++ K E Sbjct: 880 FGDGKV--ADKVIQIRN---NYKKW-----------VYDTERR--------KWVK---EH 912 Query: 1355 GYVANSV---WTVTAVSGDSVTLSDGQQTREIRPGQE--QAEQHIDLAYAITAHGAQGAS 1409 G + +T + + R P E E+ ++ AYAIT H +QG+ Sbjct: 913 GVFNGMMGFAYTFKKWNKYQKKYENKTIIRFYYPKIEAYTDEKEMEHAYAITIHKSQGSG 972 Query: 1410 ETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTD 1448 I + N+ E Y A++R K+ + V + Sbjct: 973 FENVILIIPKGLNK--FVSKEMLYTAITRAKKRLYVIVE 1009 >UniRef50_B2A8J3 Helicase, RecD/TraA family n=2 Tax=Clostridia RepID=B2A8J3_NATTJ Length = 726 Score = 139 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 80/488 (16%), Positives = 146/488 (29%), Gaps = 76/488 (15%) Query: 861 HTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYV 920 A+ A+ L F + L EA + + + V Sbjct: 211 EERAKAAVVYLLEEKSQDGNTFLKREELIEALK----ELEVENVNLNSVLEELVEEKEIV 266 Query: 921 DVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMI 980 L+ + AE+ I + K+ V + ++ EK Q Sbjct: 267 VENIPEAGELIYPAPFFFAEQGIASRLKRLKDGVDRELFPRIQKIAEKYLEEQANLVL-- 324 Query: 981 LETSDRFTVVQGYAGVG-------KTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM 1033 + ++ V++ G T V+ + + + +V+ PT RA M Sbjct: 325 --SPEQHQVIKQVPETGLMVVTGGPGTGKTTVIKCLMDIFQKAGQKVMLAAPTGRAAKRM 382 Query: 1034 RSA-GVDAQTLASFL-----HDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALI 1087 A G +A+T+ L + ++ + + L ++DE+SM+ M I Sbjct: 383 SEATGDEAKTIHRLLEFTYDKEEGMKFQRNQDRPLKGDLLIVDEASMIDTILMNNLLKAI 442 Query: 1088 AAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRD 1147 + G R V GDTDQL ++ G + + +K + RQ E V + + Sbjct: 443 -SPGTRLVLVGDTDQLPSVGAGNVLQDIIESGRIPLVRLKRVFRQARESMVVVNAHRINE 501 Query: 1148 VERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMT 1207 + + + +PR+E PE V +L Sbjct: 502 GKFPILNAKGKDFYFLPREE----PEDVVKTIISLCAKRLPNYNGYHP------------ 545 Query: 1208 LYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTA 1267 V D +P R T G Q + VLN Sbjct: 546 -----VNDIQVLSPMRRTVT------------------------GVENLNQSLQKVLNPP 576 Query: 1268 NIRDGELRRLSTWETHRDALVLVDNVYHR---------IAGISKDDGLITLQDAEGNTRL 1318 E+ D ++ V N Y + + + ++ ++ ++ G Sbjct: 577 QKNKAEINFGGACYRTGDKVMQVKNDYEKNVFNGDTGIVTKVDAEENVVNVRYGHGEEIA 636 Query: 1319 ISPREAVA 1326 RE A Sbjct: 637 YEGRELDA 644 Score = 71.8 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 96/588 (16%), Positives = 186/588 (31%), Gaps = 87/588 (14%) Query: 254 RDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQD- 312 ++ AA +R ++H + M + F ++ YR D + P +++ Sbjct: 130 KEKAAQISRGFQEHKQIKDIMVFLQEFGVSPAFALKIYRRFGDNTIQKVSENPYSLAREV 189 Query: 313 -----------------GPDVQQAVTQAIAGLSERKV----QFTYTDVLARTVGILPPEN 351 D ++ A+ L E K F + L + L EN Sbjct: 190 FGIGFKTADKIAREMGVSVDSEERAKAAVVYLLEEKSQDGNTFLKREELIEALKELEVEN 249 Query: 352 GVIE-RARAGIDEAISREQLIPLDREKGL----FTSGIHVLDELSVRALSRDIMKQNRVT 406 + ++E + IP E F + + L D R+ Sbjct: 250 VNLNSVLEELVEEKEIVVENIPEAGELIYPAPFFFAEQGIASRLKRLKDGVDRELFPRIQ 309 Query: 407 VHPEKSVPRTAGY---SDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREV 463 EK + A + V+ Q + +V G G+ + L+ + ++ G++V Sbjct: 310 KIAEKYLEEQANLVLSPEQHQVIKQVPETGLMVVTGGPGTGKTTVIKCLMDIFQKAGQKV 369 Query: 464 QIIAADRRSQMNMKQDERLSGELITGRRQLL----EGMAFTPGS-------TVIVDQGEK 512 + A R+ M + + I + EGM F +IVD+ Sbjct: 370 MLAAPTGRAAKRMSEATGDEAKTIHRLLEFTYDKEEGMKFQRNQDRPLKGDLLIVDEASM 429 Query: 513 LSLKETLTLLDGAARHNVQVLITDSGQ--RTGTGSALMAMKDAGVNTYRWQGG--EQRPA 568 + LL + VL+ D+ Q G G+ L + ++G Q Sbjct: 430 IDTILMNNLLKAISPGTRLVLVGDTDQLPSVGAGNVLQDIIESGRIPLVRLKRVFRQARE 489 Query: 569 TIISEPDRNVRYARLA------GDFAASVKAGEESVAQVS---------------GVREQ 607 +++ + + DF + E V + V + Sbjct: 490 SMVVVNAHRINEGKFPILNAKGKDFYFLPREEPEDVVKTIISLCAKRLPNYNGYHPVNDI 549 Query: 608 AILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDM-YRPGMVMEQ----WNPE 662 +L+ R+ GV L + L+P + YR G + Q + Sbjct: 550 QVLSPMRRT---VTGVENLNQSLQKVLNPPQKNKAEINFGGACYRTGDKVMQVKNDYEKN 606 Query: 663 TRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLF-------RPEKMPVADG 715 + D ++ +V A+ + + +R GE LD+ + + + PV Sbjct: 607 VFNGDTGIVTKVDAEENVVNVRYGHGEEIAYEGRELDALVHAYCISVHKSQGSEYPVVV- 665 Query: 716 ERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDS 763 L VT + + L +V+ VV+ G + + +S+ Sbjct: 666 --LPVTTQHYIMLQRN---LLYTAVTRAKSLVVLVGTKKSIGIAISNK 708 Score = 69.1 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 39/229 (17%), Positives = 81/229 (35%), Gaps = 23/229 (10%) Query: 1222 EAREQTLIVTHLNEDRRVLNSMIHDVREKAGE----LGKEQVMVPVLNTANIRDGELRRL 1277 +ARE ++V N R +N + G+ L +E+ V ++ L Sbjct: 486 QARESMVVV---NAHR--INEGKFPILNAKGKDFYFLPREEPEDVVKTIISLCAKRLPNY 540 Query: 1278 STWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTI 1337 + + D VL + + G+ + + ++++P + + Sbjct: 541 NGYHPVNDIQVLS-PMRRTVTGVENLNQSL--------QKVLNPPQKNKAEINFGGACYR 591 Query: 1338 RVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLA 1397 TGD++ K+D E+ VT V + ++ E + + + A Sbjct: 592 ---TGDKVMQVKNDYEKNVFNGDTGIVTKVDAEENVVNVRYGHGEEIAYEGRELDALVHA 648 Query: 1398 YAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVY 1446 Y I+ H +QG + + + +M Y A++R K V + Sbjct: 649 YCISVHKSQG--SEYPVVVLPVTTQHYIMLQRNLLYTAVTRAKSLVVLV 695 >UniRef50_B8J4Q4 Helicase, RecD/TraA family n=9 Tax=Bacteria RepID=B8J4Q4_DESDA Length = 749 Score = 139 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 77/437 (17%), Positives = 144/437 (32%), Gaps = 50/437 (11%) Query: 733 DRLQVASVSEDAMTVVVP-GRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFAS 791 D ++V + + V G+ + S S ++ +++ G + + + ++ + Sbjct: 131 DTIRVLDEEPERLLKVRGVGQKSLERIRASWSEHRGIRDLLLFLQPHGITPAYAVRIYRA 190 Query: 792 VTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKL---ARHPSFTVVSEQIKTRAGETS 848 A+ N R D+ + A KL HP + Sbjct: 191 YGADALGIVRENPY-RLAMDIHGIGFVTADAAARKLGFEHDHPLRVQAGTLYVLQKATDD 249 Query: 849 LETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEI 908 + AQ + DL+++A + E Sbjct: 250 GNVYLPQTALMEAVCAQLGVD---------------EDLVSDALA-----------ALEA 283 Query: 909 NAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSI---LRHILEGKEAV-----MPLMER 960 + +I R D+ + R + E L+ ++ +++ L+++ Sbjct: 284 DERIVREDMDMPGPDGTQPETGVYLRRYFHCESKTAFYLQRLMRSPKSIRFENPDALVDK 343 Query: 961 VPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRV 1020 V GEL L Q A R + V+ G T +++A+ L R R+ Sbjct: 344 VVGELNISLAPEQLEAVR--TSARSKVMVLTGGP----GTGKTTIINAIIRLFAEVRARI 397 Query: 1021 VGLGPTHRAVGEMRS-AGVDAQTLASFLHDTQLQQRSGETPD--FSNTLFLLDESSMVGN 1077 + PT RA M +G +++T+ L + + D + L ++DE+SM+ Sbjct: 398 LLAAPTGRAAKRMAETSGRESRTIHRLLEYSPKEDGFARNEDSPLACGLLVVDEASMMDT 457 Query: 1078 TDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELR 1137 + G V GD QL ++ PG V + EI RQ+ E Sbjct: 458 LLFYHLLKAV-PLGATLVLVGDVHQLPSVGPGNVLADIIASGVVPVVELTEIFRQSAESE 516 Query: 1138 EAV-YSLINRDVERALS 1153 LINR +L Sbjct: 517 IICNAHLINRGEVPSLE 533 Score = 54.9 bits (130), Expect = 3e-05, Method: Composition-based stats. Identities = 61/398 (15%), Positives = 123/398 (30%), Gaps = 47/398 (11%) Query: 1100 TDQLQAI---APGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLE 1156 +QL+A+ A + L I+ I+R E+R L+ RA + Sbjct: 354 PEQLEAVRTSARSKVMVLTGGPGTGKTTIINAIIRLFAEVR--ARILLAAPTGRAAKRMA 411 Query: 1157 SVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLA--------EAQQKAMLKGEAFPDVPMTL 1208 + F+ ++++ LA + +L VP+ Sbjct: 412 ETSGRESRTIHRLLEYSPKEDGFARNEDSPLACGLLVVDEASMMDTLLFYHLLKAVPLGA 471 Query: 1209 YEAIVRDYTGRTPEAREQTL--IVTHLNEDRRVLNSMIHDV----------REKAGELGK 1256 +V D L I+ L + GE Sbjct: 472 TLVLVGDVHQLPSVGPGNVLADIIASGVVPVVELTEIFRQSAESEIICNAHLINRGE--- 528 Query: 1257 EQVMVPVLNTANIRDGELRRLSTWETHRDA---LVLVDNVYHRIAGISKDDGLITLQDAE 1313 VP L ++ R + + + + A + LV N R G+ D + L Sbjct: 529 ----VPSLESSKDRLSDFYFIHQNDPEKAADLMVDLVRNHIPRRFGLDPVDDIQVLTPMH 584 Query: 1314 GNTRLISPREAVAEGVTLYTPDTIRVGTG-------DRMRFTKSDRERGYVANSVWTVTA 1366 + P+ + V G D++ +++ ++ + ++ Sbjct: 585 KGA--VGAGHMNTRLQEALNPNGLEVRRGERAFRLHDKVMQIRNNYDKDVFNGDMGRISF 642 Query: 1367 VSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLM 1426 + TLS R + ++ ++ + AYAI+ H +QG + + ++ Sbjct: 643 LDLADRTLSVTFDERVVPYEFDELDE-LAPAYAISIHKSQG--SEYPAVVIPIMMQHYVL 699 Query: 1427 AGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKG 1464 Y +R K+ V + ++R NN +K Sbjct: 700 LQRNLIYTGATRGKKLVILVGESRALHMAVKNNKTRKR 737 Score = 43.3 bits (100), Expect = 0.098, Method: Composition-based stats. Identities = 38/258 (14%), Positives = 80/258 (31%), Gaps = 30/258 (11%) Query: 339 VLARTVGILPPENGVIERARAGI--DEAISREQLIPLDREKGLFTSGIHVLD----ELSV 392 ++ L + ++ A A + DE I RE + + +G+++ E Sbjct: 259 LMEAVCAQLGVDEDLVSDALAALEADERIVREDMDMPGPDGTQPETGVYLRRYFHCESKT 318 Query: 393 RALSRDIMKQNRVTVHP-----------EKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGG 441 + +M+ + E ++ +AV A+ + +V G Sbjct: 319 AFYLQRLMRSPKSIRFENPDALVDKVVGELNISLAPEQLEAVRTSARSK---VMVLTGGP 375 Query: 442 AAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLL-EGMAFT 500 G+ + ++ + E + + A R+ M + I + + F Sbjct: 376 GTGKTTIINAIIRLFAEVRARILLAAPTGRAAKRMAETSGRESRTIHRLLEYSPKEDGFA 435 Query: 501 PGS-------TVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQ--RTGTGSALMAMK 551 ++VD+ + LL VL+ D Q G G+ L + Sbjct: 436 RNEDSPLACGLLVVDEASMMDTLLFYHLLKAVPLGATLVLVGDVHQLPSVGPGNVLADII 495 Query: 552 DAGVNTYRWQGGEQRPAT 569 +GV R + Sbjct: 496 ASGVVPVVELTEIFRQSA 513 >UniRef50_Q98PE1 EXODEOXYRIBONUCLEASE V ALPHA CHAIN n=1 Tax=Mycoplasma pulmonis RepID=Q98PE1_MYCPU Length = 694 Score = 139 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 52/322 (16%), Positives = 121/322 (37%), Gaps = 20/322 (6%) Query: 816 SSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVV 875 + E++ + +P + + +T + L ++ + Sbjct: 154 TKEPESQKLKNFYENPYSILSEDDFDFNEIDTYFLKILKKPVDDLERLRSIILNCFKELY 213 Query: 876 ESKKLAFSMVDLLTEA-KSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSR 934 + F++ D+ ++ K A + + FT +N IK+ ++ + + + + Sbjct: 214 STNSTKFAIQDIYKQSCKKIAFKKSDFTFF---LNDLIKQRKIILLKDKQFLAEAKMYDK 270 Query: 935 ASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYA 994 + EK L+ + + + + E ++L+ Q+ A + L + +++ GY Sbjct: 271 EFFIVEK--LKRLSKKRYSFNFNFE------DKELSKEQKEAATLCL--KNSVSILTGYP 320 Query: 995 GVGKTTQFRAVMSAV--NMLPESERPRVVGLGPTHRAV-GEMRSAGVDAQTLASFLHDTQ 1051 G GKT ++++ ++ + + ++ + + PT +A G +A+T+ SFL Sbjct: 321 GSGKTKTLKSILESIISDENKKVKKSNIAIMAPTGKAALQIFEKTGFEAKTIHSFLKLKP 380 Query: 1052 LQQRSGETPDFSNTL--FLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPG 1109 + + ++DE SMV D+ + + + GD QL AI G Sbjct: 381 KATEVSFFDVDFDHIEILVIDEFSMV-TVDLFFLILSTLSSIKKIIIVGDHRQLPAIGAG 439 Query: 1110 QPFRLQQTRSAADVAIMKEIVR 1131 V + +I R Sbjct: 440 NLLEDLLELQNISVNRLSQIFR 461 Score = 66.0 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 26/144 (18%), Positives = 54/144 (37%), Gaps = 8/144 (5%) Query: 1331 LYTPDTIR-VGTGDRMRFTKSDRERGYVANSVWT----VTAVSGDSVTLSDGQQTREIRP 1385 L+ + ++ GD++ +++ E+G + V V + ++I Sbjct: 541 LFKKNDLKNFAIGDKVMQIENNYEKGVYNGEIGIIEKFVEKVKDKDKEVYINFGDKKINY 600 Query: 1386 GQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQV 1445 E+ ++I LAYA T H QG+ I + L + Y A SR + + Sbjct: 601 SLEELNKNISLAYATTVHKFQGSESKIVIFVIFPILMNFLT--RKMIYTAFSRAVDKLYI 658 Query: 1446 YTDNRQGWTDAINNAVQKGTAHDV 1469 ++ + I + K ++ Sbjct: 659 I-GSKSALNEVIMFSKDKKILTNI 681 >UniRef50_A6LEW0 ATP-dependent exonuclease V, alpha subunit-helicase superfamily I member n=16 Tax=Bacteroidales RepID=A6LEW0_PARD8 Length = 471 Score = 138 bits (348), Expect = 2e-30, Method: Composition-based stats. Identities = 94/522 (18%), Positives = 175/522 (33%), Gaps = 96/522 (18%) Query: 957 LMERVPGELMEKLTSGQRAATRMILE-----TSDRFTVVQGYAGVGKTTQFRAVMSAVNM 1011 + +++ K T Q A + E D +++GYAG GKT+ A++ +N Sbjct: 6 ISQQIERNFPYKPTDDQFLALHTLTEFLLSEEPDSLLLMKGYAGTGKTSLVGALVKTLNE 65 Query: 1012 LPESERPRVVGLGPTHRAVGEMRS-AGVDAQTLASFLHDTQLQQRSGE-----TPDFSNT 1065 L + + L PT RA AG A T+ ++ + +T Sbjct: 66 LKQ----KTFLLAPTGRAAKVFSGYAGQKAYTIHKKIYRQRAFSNEPTGFMPADNLHKDT 121 Query: 1066 LFLLDESSMVGN-----------TDMARAYALIAAG-GGRAVASGDTDQLQAIAPGQPFR 1113 LF++DE+SM+ N + + +G R + GD QL + Sbjct: 122 LFIVDEASMIANEGLDSFVFGSGRLLDDLIQYVYSGENCRLILMGDVAQLPPV------- 174 Query: 1114 LQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPE 1173 QT S A+ EI+R V+ + +QV RQ Sbjct: 175 -MQTESP---ALNPEILR---GYNLQVWEIA---------------LTQVVRQSEDSGIL 212 Query: 1174 HSVTEFSHSQEAKLAEAQQKAMLKGEAFPD--VPMTLYEAIVRDYTGRTPEAREQTLIVT 1231 + T + E K LKG + L E I Y + + E+T+I++ Sbjct: 213 FNATRLRDALRNHTVEIFPKLQLKGFSDFTKVNGDELIEEISSAY---SRDGMEETMIIS 269 Query: 1232 HLNEDRRVLNSMIH-DVREKAGELGKEQVMV----PVLNTANIRDGELRRLSTWETHRDA 1286 N+ + N+ I + + EL ++ TAN ++ + Sbjct: 270 RSNKRATIYNNGIRNRILYREEELSSGDRLMVAKNNYYWTANCKEMDF------------ 317 Query: 1287 LVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPD-TIRVGTGDRM 1345 + + ++ + + + + A+ + Y + +++ D + Sbjct: 318 --IANGEIIQVMRVRRVTEMYGFRFAD-----------ITARFQDYDLEIDLKILL-DTL 363 Query: 1346 RFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGA 1405 + + +T+ D T + + ++ P + + AYA+T H A Sbjct: 364 QTDSPALPKELNDKLFYTILEDYEDIPTKAGKMKKMKVDPHYNVVQ--VKYAYAVTCHKA 421 Query: 1406 QGASETFAIALEGTEGNRKLMAGF-ESAYVALSRMKQHVQVY 1446 QG G L F Y A +R H+ + Sbjct: 422 QGGQWMNVFLDIGYITEEMLGEDFYRWLYTAFTRATHHLYLV 463 >UniRef50_C7NFC4 TrwC relaxase n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NFC4_KYTSD Length = 1160 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 141/1004 (14%), Positives = 279/1004 (27%), Gaps = 159/1004 (15%) Query: 11 GSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRLPDGADL---- 66 A YY DN + + G+G + D + ++ P + Sbjct: 31 SGADEYYLRADN---AIAEYVAFDGKGEVTAARS--LSPDEYEGWVDWHDPITGEPMGTP 85 Query: 67 SRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGD--KRLIDAHNQAVDFAVRQVEALASTR 124 + +G+ D+T +PKS+S+ A L + + L A A+ R + + TR Sbjct: 86 RKPAEGTKGSPLFCDMTTDSPKSLSVAAALHPEVSEALDQAQQDALGEIRRWLGQHSVTR 145 Query: 125 VMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDKVGKTG 184 V E V + + H TSR +P H H + G+W+ L + + K Sbjct: 146 VGPREAREIVPIEQMQVVGIGHKTSRAGDPHRHIHMQIGTRIWAAGKWRALDTAALFKQQ 205 Query: 185 FIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVEAFSGRSQTIR-- 242 + + +L E + G + V + E+ S RS I Sbjct: 206 GAIHAMGTAVIA---AHPELAETLSRHGLTLDPVSGE-VAELEPFNA-VMSKRSAQINRN 260 Query: 243 ------EAVGEDA--------SLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDI 288 E E + + + A R K+ D + + W Q L + G+D Sbjct: 261 LDHLEAEWQTEHPGETPGPVVTARMQGTAWAHQRPGKKPADLKNE-QWWQQELTDAGYDP 319 Query: 289 RAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILP 348 R + D VQ+ ++A+ + +T V I Sbjct: 320 ENL---------GRRAVQFSIALDALLVQEVASRALDRCAAGASAWTRHTVQEHVTRITT 370 Query: 349 -----------PENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVR---- 393 E + A D +P TS V E ++R Sbjct: 371 EAGVQAAPEELREFIAVATGLATEDCFSVLPPGVPTPEHVAHLTSLGVVAAETALRDQLT 430 Query: 394 ALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELV 453 A + + ++ G + A + +A P + + +G+ + + Sbjct: 431 ASIPEQEPERPDVTEAAQAAGLDEGQTLAAAAVASTDPLVIV--EDAAGSGKTTMLRTAI 488 Query: 454 MMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQ--------------------- 492 +A E GR +++A +R+ +++ + + Sbjct: 489 EVAAEHGRSTRVVAPTKRAAQIAQEELGIPATSVAALAYAHGWRWNADGVWTRLNRGDTD 548 Query: 493 -----LLEGMA----FTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGT 543 + G + G V+VD+ L LL A + V + + Sbjct: 549 PMTGGIYTGPPPEAVLSRGGRVVVDEVGMLDQDTAHALLTITAEASATVALVGDRAQLPA 608 Query: 544 ---GSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQ 600 G L TY + + +R GD + Sbjct: 609 VGRGGVLDMAAQIRGRTYDMSELHRFTDAEYAALTLAMRDRSSPGDVFDRLATMHLVTLH 668 Query: 601 VSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWN 660 + +T R E A + R G V Sbjct: 669 ADDDAAREHITDHARDG----------EAITVATNDEATALNERIRAGRVEAGKV----- 713 Query: 661 PETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRV 720 S ++T+ + G + + G+ ++ Sbjct: 714 -----------------SDTVTVTGSDG---------------------LSIGAGDLIQT 735 Query: 721 TGKIPGLRVSGGDRLQVASVSEDAMTV----VVPGRAEPATLPVSDSPFTALKLENGWVE 776 + V+ + V V+ + TV V GR P T+ + + Sbjct: 736 RRNDSDVGVANRQQWIVQHVNSEDGTVYAREVGSGRKNPRTVALPVEYVGENAHLSYAAT 795 Query: 777 TPGHSVSDSATVFASVTQMAMDNATLNGLA--RSGRDVRLYSSLDETRTAEKLA--RHPS 832 G + ++ ++++ G+ R + + + A+ + + Sbjct: 796 AYGVQGATVSSSHTALSEATSAAGVYVGMTRGRHTNRLHIVAEDMADARAQFIEAMKRDP 855 Query: 833 FTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAK 892 + +A E ++ ++ L T + E + A Sbjct: 856 ADRGLDHATAQAAE-AVRGFVADGPVRLVTEELARLDHEAEQAERAAERWEQ-----TAA 909 Query: 893 SFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRAS 936 F A+ + A +++ + V T L + Sbjct: 910 RFDAQRATHQAEDNQSAAVLRKAEDSSEQVRAEVATPLTTQAET 953 Score = 98.4 bits (243), Expect = 3e-18, Method: Composition-based stats. Identities = 82/503 (16%), Positives = 137/503 (27%), Gaps = 89/503 (17%) Query: 850 ETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEIN 909 A+ + Q+ AL + A++ + E G E+ Sbjct: 324 RRAVQFSIALDALLVQEVASRALDRCAAGASAWTRHTVQEHVTRITTE-AGVQAAPEELR 382 Query: 910 AQIKRG---------DLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMER 960 I +L V L S AE ++ + P Sbjct: 383 EFIAVATGLATEDCFSVLPPGVPTPEHVAHLTSLGVVAAETALRDQLTASIPEQEPERPD 442 Query: 961 V-PGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPR 1019 V L GQ A + ++D +V+ AG GKTT R + Sbjct: 443 VTEAAQAAGLDEGQTLAAAAV-ASTDPLVIVEDAAGSGKTTMLRTAIEVAAE----HGRS 497 Query: 1020 VVGLGPTHRAVG-EMRSAGVDAQTLASFLHDTQLQQRS---------GETPDFSNTL--- 1066 + PT RA G+ A ++A+ + + + G+T + + Sbjct: 498 TRVVAPTKRAAQIAQEELGIPATSVAALAYAHGWRWNADGVWTRLNRGDTDPMTGGIYTG 557 Query: 1067 ------------FLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRL 1114 ++DE M+ + A GD QL A+ G + Sbjct: 558 PPPEAVLSRGGRVVVDEVGMLDQDTAHALLTITAEASATVALVGDRAQLPAVGRGGVLDM 617 Query: 1115 QQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEH 1174 M E+ R T D E A L S A H Sbjct: 618 AAQIRG-RTYDMSELHRFT-------------DAEYAALTLAMRDRSSPGDVFDRLATMH 663 Query: 1175 SVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLN 1234 VT + A+ T AR+ I N Sbjct: 664 LVTLHADDDAAREH------------------------------ITDHARDGEAITVATN 693 Query: 1235 EDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVY 1294 ++ LN I R +AG++ V V + + G + T D V Sbjct: 694 DEATALNERIRAGRVEAGKVSD---TVTVTGSDGLSIGAGDLIQTRRNDSDVGVANRQQ- 749 Query: 1295 HRIAGISKDDGLITLQDAEGNTR 1317 + ++ +DG + ++ + Sbjct: 750 WIVQHVNSEDGTVYAREVGSGRK 772 >UniRef50_C7D7J8 Exodeoxyribonuclease V n=1 Tax=Thalassiobium sp. R2A62 RepID=C7D7J8_9RHOB Length = 639 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 73/388 (18%), Positives = 132/388 (34%), Gaps = 64/388 (16%) Query: 948 LEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMS 1007 + + + L+E LT QR A RM R V+ GYAG GKTT + V Sbjct: 235 ITDPDTLDALLEEYEAPQPFPLTDAQREAVRM--SHRHRLLVLAGYAGSGKTTVLKEVCQ 292 Query: 1008 AVNMLPESERPRVVGLGPTHRAVGEMRSA-GVDAQTLASFLHDTQLQQRSGETPDFSNTL 1066 L ++ + + + RA A G A T+A FL ++Q +T NT+ Sbjct: 293 TQETLRKTP----LIITLSGRAAQRANEATGRRAITVARFL----IEQEKSDTLLDENTV 344 Query: 1067 FLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIM 1126 + DE+SM+G ++ R + G + GD QL ++PG F ++ Sbjct: 345 LIADEASMLGLVEVWRILRRL--GDASLILCGDPAQLPPVSPGVVFHALVRHPDIRKVVL 402 Query: 1127 KEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAK 1186 + RQ R + +L + + L ++ A ++ E Q A Sbjct: 403 DRVHRQDE--RTGIPALAEGVRDGIIGTLPPFTGAKPGVTFDACERDNLCHEIVRLQTAL 460 Query: 1187 LAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHD 1246 A+ ++ I+ N++ ++N+ H Sbjct: 461 HADGNHPDHVQ-------------------------------IIAPTNKEIDIINTHFHG 489 Query: 1247 VREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISK---- 1302 + + G P L + + W + L + R+ I Sbjct: 490 LAMQGG---------PTLWP--GTNIAVGEPIIWTVNNAERGLTNGALGRVLSIEDERIC 538 Query: 1303 ---DDGLITLQDAEGNTRLISPREAVAE 1327 D L++ +G ++ +V + Sbjct: 539 ALLDGTEHELKEEDGQFVQLAYAISVHK 566 Score = 71.0 bits (172), Expect = 4e-10, Method: Composition-based stats. Identities = 53/419 (12%), Positives = 117/419 (27%), Gaps = 68/419 (16%) Query: 414 PRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQ 473 P T +AV R L +++G G +G+ + E+ + II R+ Sbjct: 255 PLTDAQREAVR--MSHRHRLLVLAGYAG-SGKTTVLKEVCQTQETLRKTPLIITLSGRAA 311 Query: 474 MNMKQDERLSGELITGRRQLLEGMA--FTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQ 531 + + E + +I D+ L L E +L + Sbjct: 312 QRANEATGRRAITVARFLIEQEKSDTLLDENTVLIADEASMLGLVEVWRILRRLG--DAS 369 Query: 532 VLITDSGQRTGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASV 591 +++ + S GV + ++ R + Sbjct: 370 LILCGDPAQLPPVSP-------GVVFHALVRHPDIRKVVLDRVHRQDERTGIP------- 415 Query: 592 KAGEESVAQVSGVREQAILTQAIRSELKTQGVL-----GLPEVTMTALSPVWLDSRSRYL 646 L + +R + G L P VT A L L Sbjct: 416 -----------------ALAEGVRDGII--GTLPPFTGAKPGVTFDACERDNLCHEIVRL 456 Query: 647 RDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFR 706 + + + D + + + + + + ++ +L+ Sbjct: 457 Q---------TALHADGNHPDH--VQIIAPTNKEIDIINTH-----FHGLAMQGGPTLWP 500 Query: 707 PEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFT 766 +A GE + T ++ G +V S+ ++ + ++ G + + Sbjct: 501 GT--NIAVGEPIIWTVNNAERGLTNGALGRVLSIEDERICALLDGTEHE----LKEEDGQ 554 Query: 767 ALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLN-GLARSGRDVRLYSSLDETRTA 824 ++L A + + +D + + L R+ V SL+ + A Sbjct: 555 FVQLAYAISVHKAQGSQWPAVIIPTFPSKIVDRSLIYTALTRAQEQVHFLGSLNAMQRA 613 Score = 71.0 bits (172), Expect = 4e-10, Method: Composition-based stats. Identities = 64/374 (17%), Positives = 121/374 (32%), Gaps = 50/374 (13%) Query: 1119 SAADVAIMKEIVRQTPELREA--VYSLINRDVERALSG-----------LESVKPSQVPR 1165 + ++KE+ + LR+ + +L R +RA L + S Sbjct: 280 GSGKTTVLKEVCQTQETLRKTPLIITLSGRAAQRANEATGRRAITVARFLIEQEKSDTLL 339 Query: 1166 QEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEARE 1225 E + + ++ A L P + +V R P+ R+ Sbjct: 340 DENTVLIADEASMLGLVEVWRILRRLGDASLILCGDPAQLPPVSPGVVFHALVRHPDIRK 399 Query: 1226 QTLIVTHLNEDRR---VLNSMIHDVREKAGEL-----GKEQVMVPVLNTANIRDGELRRL 1277 L H ++R L + D G L K V N+ Sbjct: 400 VVLDRVHRQDERTGIPALAEGVRDGII--GTLPPFTGAKPGVTFDACERDNL-------C 450 Query: 1278 STWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTI 1337 + AL N + I+ + I + + + + + G Sbjct: 451 HEIVRLQTALHADGNHPDHVQIIAPTNKEIDIINTHFHGLAMQGGPTLWPGTN------- 503 Query: 1338 RVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLA 1397 + G+ + +T ++ ERG ++ V ++ + + E++ Q Q LA Sbjct: 504 -IAVGEPIIWTVNNAERGLTNGALGRVLSIEDERICALLDGTEHELKEEDGQFVQ---LA 559 Query: 1398 YAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAI 1457 YAI+ H AQG+ I + Y AL+R ++ V G +A+ Sbjct: 560 YAISVHKAQGSQWPAVII----PTFPSKIVDRSLIYTALTRAQEQVHF-----LGSLNAM 610 Query: 1458 NNAVQKGTAHDVFE 1471 A+++ A DV + Sbjct: 611 QRAIERPAAADVRK 624 >UniRef50_Q5QUQ9 ATP-dependent exoDNAse (Exonuclease V), alpha subunit, superfamily I helicase n=1 Tax=Idiomarina loihiensis RepID=Q5QUQ9_IDILO Length = 647 Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats. Identities = 99/613 (16%), Positives = 193/613 (31%), Gaps = 132/613 (21%) Query: 901 FTELGGEINAQIKRGDLLYVDVAKGY----GTGLLVSRASYEAEKSILRHILEG------ 950 F + G ++ A + + + VD G L R ++ E I + Sbjct: 93 FRQFGTDVEAALIQSHCVDVDGKGNQPLVLSDGKLYLRRYWQYEAFIENDLQARMSDRPV 152 Query: 951 ------KEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRA 1004 K + L ++ G+ E++ QR A + +RF+V+ G G GKT Sbjct: 153 TNDDLLKSTLAKLFDKPDGDKAEEINW-QRVACANTV--RNRFSVITGGPGTGKTYTVVR 209 Query: 1005 VMSAVNMLPESERP---RVVGLGPTHRAVGEMRSAGVDAQ-------------------- 1041 +++A+ RV PT +A + + ++++ Sbjct: 210 LLTALQHQTLFLGLPPLRVSLAAPTGKAAARLTES-IESELNRLRGDAKLATLKDALDAI 268 Query: 1042 -----TLASFLH---DTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGR 1093 TL L +++ + + P + ++DE+SM+ M R Sbjct: 269 KPEGKTLHRLLGVKPNSRAFKHHADNP-LRTDVVIVDEASMIDIEMMTALLK-ATPKNAR 326 Query: 1094 AVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYS-------LINR 1146 V GD DQL ++ G + + T + + V LI+ Sbjct: 327 LVLIGDKDQLASVEAGAVLGNLCEGADQGHYHTE-----TAQWLQHVADTPVLPAELIDN 381 Query: 1147 DVERALSGLESVKPS---QVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPD 1203 + E+ L + + S P + A A + + K A + + Sbjct: 382 NGEQRLQHVVKFRKSYRFHGPIADLANAINRQDNAATKQELEKAKVADEDYPVSLYEVSS 441 Query: 1204 VPMTLYEAIVRDYT----GRTPEAREQTLIVTHLNEDR------RVLNSMIHDVREKAGE 1253 + +EA+V+ T R N + +N + + + Sbjct: 442 LDDPAFEALVKRNLTTSGSLTLHVRNN----ADTNSNVTKTANAEDINKLAQEALQN--- 494 Query: 1254 LGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAE 1313 L Q++ + V+ I G++ + E Sbjct: 495 LSNFQILT-----------------ALREGPWGVKAVNQKVGEILGVNANTWY------E 531 Query: 1314 GNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVT 1373 G P L ++ GD + T D E G++ V D Sbjct: 532 GR-----PVMVTKNDYGL------KLNNGD-IGLTFKDPEHGHL-----RVA--FPDQTN 572 Query: 1374 LSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAY 1433 S+ + R + P + HI+ YA+T H +QG+ + + + + E Y Sbjct: 573 KSENKGVRWVLPSR---LTHIETVYAMTVHKSQGSEFKHTVMVLPD--HDSPVLSKELLY 627 Query: 1434 VALSRMKQHVQVY 1446 ++R K+ + + Sbjct: 628 TGITRAKERLSLV 640 >UniRef50_UPI0001BCE40A exonuclease V subunit alpha n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=UPI0001BCE40A Length = 912 Score = 138 bits (346), Expect = 3e-30, Method: Composition-based stats. Identities = 148/795 (18%), Positives = 249/795 (31%), Gaps = 139/795 (17%) Query: 8 RSAGSAGNY----YTDKDNYYVLGSMGERWAGRGAEQL--GLQGSV----------DKDV 51 SA +A +Y ++ D+YY+ G A + ++ SV D + Sbjct: 6 GSAAAARSYVEADHSRADDYYLGEGAGV------AARFVVDVRDSVSPTVHQAPDLDGES 59 Query: 52 FTRLLEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGD--KRLIDAHNQA 109 + R + G D ++T + PK+ S+ A L + L A ++A Sbjct: 60 YERWVGGYDVDTDRAKGRLRDDASALRFVEVTVNGPKTWSLAAALHPEISAALDAAQDEA 119 Query: 110 VDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHN 169 + V A+TRV G+ V + A+ H TSR +P H H + + Sbjct: 120 AAQIIGWVAEHATTRVGPRGRQVQVRVEQVEAAVIRHHTSRAGDPHRHLHLQINARVFAH 179 Query: 170 GEWKTLSSDKVGKTGF-IENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPG 228 G W+ + S + I + +A +R L G+ + + E+ Sbjct: 180 GRWRGIHSVGARDSLEAINGIGHAAVATDPGFRAALAAH----GFTFDPITGEIN-ELAP 234 Query: 229 VPVEAFSGRSQTIREAV------------GEDASLKSRDV----AALDTRKSKQ-HVDPE 271 FS R+ I V G++ K R A R K D Sbjct: 235 Y-AGRFSARAAQIARNVDAFEAQWRAAHPGQEPGPKLRRTWDRRAWSQARPDKVIPTDGA 293 Query: 272 IKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERK 331 + W L E G+ R A + + T + G ++D AV + L ++ Sbjct: 294 AMVEAWNDDLHELGY---RTRSAPARHTSVSTPSVGSLNRDA-----AVEVVLMRLGAQR 345 Query: 332 VQFTYTDVLARTVGILPPENGVIE-------------RARAGIDEAISREQLIPLDREKG 378 + D+ + + V+E RAR+ + R L P Sbjct: 346 SAWNAADIRGQVEQWIAATGLVVEAGVRLELAEDLTARARSACTPLLDRPDL-PEHIRAL 404 Query: 379 LFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSG 438 I V D+++ + + P+ S +AV+ LA +L ++ G Sbjct: 405 SSPRVIGVEDKITELLAMLACGRGADAALPPQLSFGLDPAQQNAVAALA-GTQNLLVIEG 463 Query: 439 QGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGR-------- 490 G AG+ +A QGR V ++ ++ + Sbjct: 464 AAG-AGKTTTLAATKTALAAQGRRVTVVTPTLKAAEVAAAEIDAPAFSAAWLVHQWGWRW 522 Query: 491 -------RQLLEGMA----FTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQ 539 R T G +++D+ L LLD A V+V Sbjct: 523 DSDGRWGRDFQVPPDPAARLTRGDLLVIDEAGMLDQDTARALLDVALEAQVRVAFMGDRH 582 Query: 540 RTGT---GSALMAMKD---------------------AGVNTYRWQGGEQR-----PATI 570 + G L A ++ +GG I Sbjct: 583 QLPAVGRGGVLDLATQHTGPEATVCLDVVHRFADPAYAELSVAMRRGGPVFDHLWERGHI 642 Query: 571 ISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQ-AILTQAIRSELKTQGVLGLPEV 629 R LA A ++ AG S+A ++ REQ L AIR L G++ V Sbjct: 643 RLHASEAERTQALANQTAEAILAGHTSLALMADTREQVTALNAAIRDRLVEAGLVDDHTV 702 Query: 630 TMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVT----------AQSH 679 +T L+ L R W+ + + I + Sbjct: 703 -VTTLAGERLGVGDRVATRR-------NDWHLSLANRQTWTITAINPTTSSTTMASDAER 754 Query: 680 SLTLRDAQGETQVVR 694 LTLR+ +G T+ V Sbjct: 755 ELTLRNERGLTRQVP 769 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 80/513 (15%), Positives = 144/513 (28%), Gaps = 84/513 (16%) Query: 866 QAIHLALPVVESKKLAFSMVDLL------TEAKSFAAEGTGFTELGGEINAQIKRGDLLY 919 A+ + L + +++ A++ D+ A E EL ++ A+ + Sbjct: 332 AAVEVVLMRLGAQRSAWNAADIRGQVEQWIAATGLVVEAGVRLELAEDLTARARSACTPL 391 Query: 920 VDVAK-GYGTGLLVSRASYEAEKSI---LRHILEGKEAVMPLMERVPGELMEKLTSGQRA 975 +D L S E I L + G+ A L P +L L Q+ Sbjct: 392 LDRPDLPEHIRALSSPRVIGVEDKITELLAMLACGRGADAAL----PPQLSFGLDPAQQN 447 Query: 976 ATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMR- 1034 A L + V++G AG G ++A ++ RV + PT +A Sbjct: 448 AVA-ALAGTQNLLVIEGAAGAG----KTTTLAATKTALAAQGRRVTVVTPTLKAAEVAAA 502 Query: 1035 SAGVDAQTLASFLHDTQLQQRSGET-------------PDFSNTLFLLDESSMVGNTDMA 1081 A + A +H + S L ++DE+ M+ Sbjct: 503 EIDAPAFSAAWLVHQWGWRWDSDGRWGRDFQVPPDPAARLTRGDLLVIDEAGMLDQDTAR 562 Query: 1082 RAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVY 1141 + R GD QL A+ G L + + + Sbjct: 563 ALLDVALEAQVRVAFMGDRHQLPAVGRGGVLDLATQHTGPEATV--------------CL 608 Query: 1142 SLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAF 1201 +++R + A + L P + W H Sbjct: 609 DVVHRFADPAYAELSVAMRRGGPVFDHLWERGH------------------------IRL 644 Query: 1202 PDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMV 1261 +A+ ++ E LN+ I D +AG + + +V Sbjct: 645 HASEAERTQALANQTAEAILAGHTSLALMADTREQVTALNAAIRDRLVEAGLVD-DHTVV 703 Query: 1262 PVLNTANI-------RDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEG 1314 L + LS + ++ S + +TL++ G Sbjct: 704 TTLAGERLGVGDRVATRRNDWHLSLANRQTWTITAINPTTSSTTMASDAERELTLRNERG 763 Query: 1315 NTRLISPREAV-----AEGVTLYTPDTIRVGTG 1342 TR + A A T+Y G Sbjct: 764 LTRQVPSWYARAWVESAYATTVYGAQGETTAVG 796 Score = 60.6 bits (145), Expect = 5e-07, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 47/116 (40%), Gaps = 17/116 (14%) Query: 1338 RVGTGDRMRFTKSDRERGYVANSVWTVTAVSG---DSVTLSDGQQTREIRPGQEQAEQH- 1393 R+G GDR+ ++D WT+TA++ + SD ++ +R + Q Sbjct: 710 RLGVGDRVATRRNDWHLSLANRQTWTITAINPTTSSTTMASDAERELTLRNERGLTRQVP 769 Query: 1394 -------IDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQH 1442 ++ AYA T +GAQG + + SAYV ++R + Sbjct: 770 SWYARAWVESAYATTVYGAQGETTAVGHLVLDQS------TTAASAYVGMTRGRHD 819 >UniRef50_B2JBK4 Exodeoxyribonuclease V, alpha chain n=2 Tax=Nostocaceae RepID=B2JBK4_NOSP7 Length = 705 Score = 138 bits (346), Expect = 3e-30, Method: Composition-based stats. Identities = 76/404 (18%), Positives = 138/404 (34%), Gaps = 48/404 (11%) Query: 774 WVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSF 833 ++ + G S + + ++ + T N + D+ L + A L Sbjct: 120 FLHSHGVSTTYAVKIYRHYLDEELATLTSNPY-QLAADIYGIGFLRTDKIAFNLG----- 173 Query: 834 TVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKS 893 Q + RAG L+ A H LP + + LLT A Sbjct: 174 VAPDSQFRYRAG----------LIHVLNEAAADG-HCYLPQPKLIENVIK---LLTTA-D 218 Query: 894 FAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHIL----- 948 E ++ I + DL+ T L + E+++ + I Sbjct: 219 HTPEEDALADI---IKDMALKDDLIRE--KSEDQTLLCYLPTYFHTEQNLAQLIQSRFCQ 273 Query: 949 ---EGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAV 1005 + V +ER KL+ QR A M + R ++ G G GKT + + Sbjct: 274 PVAQDMPRVRAWIERFTKSRKIKLSPQQRLAVEMAAYS--RVMILTGGPGCGKTFTTQII 331 Query: 1006 MSAVNMLPESERPRVVGLGPTHRAVGEMRS-AGVDAQTLASFLH---DTQLQQRSGETPD 1061 +S L ++ + PT RA + ++A+T+ L T R + P Sbjct: 332 VS----LWKAMGKSIALAAPTGRAAQRLSQITQLEAKTIHCLLEFDPKTMGFLRDNQNP- 386 Query: 1062 FSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAA 1121 +T + E+SM+ +A + G + + GD DQL ++ PGQ Sbjct: 387 LPHTAIVALEASMLDL-FLASSLVKAIQYGSQLLLVGDIDQLPSVGPGQFLSDLINSGHV 445 Query: 1122 DVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPR 1165 V + ++ RQ + A+ ++ +E + + V Sbjct: 446 PVVRLTKVFRQAQ--QSAIIIAAHQINRSQFPTIEPISDNPVSE 487 Score = 63.3 bits (152), Expect = 8e-08, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 51/125 (40%), Gaps = 4/125 (3%) Query: 1339 VGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAY 1398 + GDR+ +D + A+ + + ++ + Q I L++ Sbjct: 564 LREGDRIIQLTNDYNHEVFNGDFGIIKAIDPEEMEVTVQYGKHTVVRTGADLNQ-IALSW 622 Query: 1399 AITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAIN 1458 ++T H +QG+ I T+ +M + Y AL+ KQ + + +++ + A+ Sbjct: 623 SLTIHQSQGSEYPVVILPIYTQ--PYMMLSRKQFYTALTCAKQ-LAIVVGSKKAISKALR 679 Query: 1459 NAVQK 1463 ++ + Sbjct: 680 SSDGQ 684 Score = 59.9 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 46/301 (15%), Positives = 98/301 (32%), Gaps = 33/301 (10%) Query: 295 ADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVI 354 D+ A + P + + + +A A + ++ + +L + Sbjct: 165 TDKIAFNLGVAPDSQFRYRAGLIHVLNEAAA---DGHCYLPQPKLIENVIKLLTTADHTP 221 Query: 355 ERARAG--IDEAISREQLIPLDREK--------GLFTSGIHVLDELSVRALSRDIMKQNR 404 E I + ++ LI E F + ++ + R R Sbjct: 222 EEDALADIIKDMALKDDLIREKSEDQTLLCYLPTYFHTEQNLAQLIQSRFCQPVAQDMPR 281 Query: 405 VTVHPEKS-----VPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQ 459 V E+ + + AV + A R + I++G G G+ +V + + Sbjct: 282 VRAWIERFTKSRKIKLSPQQRLAVEMAAYSR--VMILTGGPGC-GKTFTTQIIVSLWKAM 338 Query: 460 GREVQIIAADRRSQMNMKQDERLSGELITGRRQ--------LLEGMAFTPGSTVIVDQGE 511 G+ + + A R+ + Q +L + I + L + P + ++ + Sbjct: 339 GKSIALAAPTGRAAQRLSQITQLEAKTIHCLLEFDPKTMGFLRDNQNPLPHTAIVALEAS 398 Query: 512 KLSLKETLTLLDGAARHNVQVLIT---DSGQRTGTGSALMAMKDAGVNTYRWQGGEQRPA 568 L L +L+ A ++ Q+L+ D G G L + ++G R A Sbjct: 399 MLDLFLASSLV-KAIQYGSQLLLVGDIDQLPSVGPGQFLSDLINSGHVPVVRLTKVFRQA 457 Query: 569 T 569 Sbjct: 458 Q 458 >UniRef50_D2PTF6 TrwC relaxase n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PTF6_9ACTO Length = 1561 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 155/822 (18%), Positives = 256/822 (31%), Gaps = 219/822 (26%) Query: 18 TDKDNYYV----LGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEG---------RLPDG- 63 T ++NYY G RW GRGAE LGL G VD T L E R P Sbjct: 20 TGRENYYTGATAAGEPPGRWYGRGAEALGLAGEVDTQDMTALYERFIDPRDEHFRDPAKW 79 Query: 64 ---------------------ADLSRMQDGSNRHRP---------------GYDLTFSAP 87 A L+R R +D TFS Sbjct: 80 DEAQTLGHTGRAYKTQQQLYQAALAREPGADAERRTELMVQAGQKAQQNVTFHDATFSVQ 139 Query: 88 KSVSMMA-------------------MLGGDKRLIDA----------------------H 106 KSV+++ L R D H Sbjct: 140 KSVTVLHTAFEAQEVQARGAVQAARGALAEAHRTGDVAAVHRFEQAVHRAETEAATWTEH 199 Query: 107 NQAVDFA--------VRQVEALAST-RVMTDGQSETV--LTGNLVMALFNHDTSRDQEPQ 155 +AV+ A + + A RV G + +A F SR+ +PQ Sbjct: 200 REAVEEAIWAGNRAALDYLADKAGYVRVGHHGGASGRWADAHEWTVASFFQHDSREHDPQ 259 Query: 156 LHTHAVVANVTQ-HNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQV-EALGY 213 LH H + N Q +G+W+TL S + +Y Q A G + L++ + LG Sbjct: 260 LHVHNAILNRVQGADGKWRTLDS---------KAMYKYQSAAGSVGERVLEQHLTRTLGV 310 Query: 214 ETEVVGKHGMWEMPGVP---VEAFSGRSQTI---------------REAVGEDASLKSRD 255 + ++ E+ G+ ++ FS R + I A + + Sbjct: 311 QFKLRDDGEAREIVGIDQDVMDLFSTRRRAITKKTAALVDEFRERFERAPNGLELDRLQQ 370 Query: 256 VAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPD 315 A L TRK+K + + R ADQ R P + D Sbjct: 371 QATLATRKAKSPTGETVAERLERWDAELRAEVSGGLRRVADQVLATRQAQP---AVQDFD 427 Query: 316 VQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIE--RARAGIDEAISRE--QLI 371 + QA+A + E + ++ D+ LP E G +E +D ++ + + Sbjct: 428 ADAVLEQALARVQETQAEWRAGDLTRAISLALPDELGAMEPGELIELLDGLTAKGLERAV 487 Query: 372 PLDREK------------------------GLFTSGIHVLDELSVRA--------LSRDI 399 LD E+ F + H+ E ++ + Sbjct: 488 ALDAERPGTSQLPEQLRLANGESSYRAPGRATFATPGHLNAERALARAGYAHGAPVMTAQ 547 Query: 400 MKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMARE- 458 ++ V ++ + + AV + + + G G G+ V L + Sbjct: 548 HAKHFVRQLADRGLELGGDQAAAVQNILCSGAKVEALIGPAG-TGKSRVVGALAKAWEDP 606 Query: 459 -----QGREVQIIAADRRSQMNMKQDERLSGELITGRRQLL------------EGMAFTP 501 Q R V +AA + + + D ++ IT Q + A + Sbjct: 607 ALWHGQQRRVVGLAASQVATEVLAAD-GVTARNITRWLQTQASIAAGTASGEYKAWALSA 665 Query: 502 GSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR-----------TGTGSALM-- 548 G V+VD+ + K+ ++ + ++L+ ++ TG AL Sbjct: 666 GDLVVVDESGMANTKDLASIQRLCDQAEAKLLLVGDQRQLAAVGAGGGMGLVTGQALTHE 725 Query: 549 -------AMKDAGVNTYRWQGGEQ-------RPATIISEPDRNVRYARLAGD-FAASVKA 593 A G + R + G+Q R II R LAGD + A Sbjct: 726 LTQTHRFAADWEGPASLRLRTGDQTVLGEYHRHGRIID-GGHVERAETLAGDAWLADRLN 784 Query: 594 GEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALS 635 G+ S+ V + A + +R+ L G++ L Sbjct: 785 GQHSLLIVDTNEQAARVAAQLRNRLVNLGLVDDKHRVQLGLQ 826 Score = 96.5 bits (238), Expect = 9e-18, Method: Composition-based stats. Identities = 76/482 (15%), Positives = 145/482 (30%), Gaps = 77/482 (15%) Query: 888 LTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHI 947 L A + AE G ++L ++ ++ G+ + G + AE+++ R Sbjct: 483 LERAVALDAERPGTSQLPEQL--RLANGE----SSYRAPGRATFATPGHLNAERALAR-- 534 Query: 948 LEGKEAVMPLME--------RVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKT 999 G P+M R + +L Q AA + IL + + + G AG GK+ Sbjct: 535 -AGYAHGAPVMTAQHAKHFVRQLADRGLELGGDQAAAVQNILCSGAKVEALIGPAGTGKS 593 Query: 1000 TQFRAVMSAVN--MLPESERPRVVGLGPTHRAVGEMRSAGVDAQTLASFLHDTQLQQRSG 1057 A+ A L ++ RVVGL + A + + GV A+ + +L Sbjct: 594 RVVGALAKAWEDPALWHGQQRRVVGLAASQVATEVLAADGVTARNITRWLQTQASIAAGT 653 Query: 1058 ETPDFS------NTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQP 1111 + ++ L ++DES M D+A L + + GD QL A G Sbjct: 654 ASGEYKAWALSAGDLVVVDESGMANTKDLASIQRLCDQAEAKLLLVGDQRQLA--AVGAG 711 Query: 1112 FRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWA 1171 + A + + R + + + L Sbjct: 712 GGMGLVTGQALTHELTQTHRFAADWEGPASLRLRTGDQTVLGEY---------------- 755 Query: 1172 PEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVT 1231 G + E + D + +L++ Sbjct: 756 -----------------------HRHGRIIDGGHVERAETLAGDAWLADRLNGQHSLLIV 792 Query: 1232 HLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLN-----TANIRDGELRRLSTWETHRDA 1286 NE + + + + G + + + L ++ S + Sbjct: 793 DTNEQAARVAAQLRNRLVNLGLVDDKHRVQLGLQGTYAGRGDLIQARKNDWSVARLSGNR 852 Query: 1287 LVLVDNVYHRIAGISKDDGL------ITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVG 1340 ++ + + + D L +D + + P VAE V L T+ Sbjct: 853 RAAINRGEYEVLQVLPDGSLRVAPLQHGTRDRVPDETMTLPARYVAEHVALGYAATVNSA 912 Query: 1341 TG 1342 G Sbjct: 913 QG 914 Score = 54.5 bits (129), Expect = 4e-05, Method: Composition-based stats. Identities = 68/415 (16%), Positives = 114/415 (27%), Gaps = 41/415 (9%) Query: 1132 QTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHS---VTEFSHSQEAKLA 1188 Q A + R++ R L S+ + AWA V + S K Sbjct: 623 QVATEVLAADGVTARNITRWLQTQASIAAGTASGEYKAWALSAGDLVVVDESGMANTKDL 682 Query: 1189 EAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLN----SMI 1244 + Q+ + EA + + G Q L R + + + Sbjct: 683 ASIQRLCDQAEAKLLLVGDQRQLAAVGAGGGMGLVTGQALTHELTQTHRFAADWEGPASL 742 Query: 1245 HDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHR-----DALVLVDNVYHRIAG 1299 LG+ +++ ++ E W R L++ N Sbjct: 743 RLRTGDQTVLGEYHRHGRIIDGGHVERAETLAGDAWLADRLNGQHSLLIVDTNEQAARVA 802 Query: 1300 ISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVAN 1359 + L+ L + R+ + G D I+ D S R + Sbjct: 803 AQLRNRLVNLGLVDDKHRVQLGLQGTYAG----RGDLIQARKNDWSVARLSGNRRAAINR 858 Query: 1360 SVWTVTAVSGDS----VTLSDGQQTREIRPGQEQAEQ----HIDLAYAITAHGAQGASET 1411 + V V D L G + R + H+ L YA T + AQG S Sbjct: 859 GEYEVLQVLPDGSLRVAPLQHGTRDRVPDETMTLPARYVAEHVALGYAATVNSAQGLSVD 918 Query: 1412 FAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQK-------- 1463 A A+ + + YV SR + +Y R DA Sbjct: 919 TAHAVASS------ATSLNALYVEASRGRHANTIYVVTRSAAADAETGETAASLHRTPVA 972 Query: 1464 --GTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPARFI 1516 + D + + R A +T A + LA A ++ Sbjct: 973 VLASIMDSDDERRQRSATEAREESATEAARHRTPA-ELLADGITLATASRAADWL 1026 >UniRef50_B0MLK7 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MLK7_9FIRM Length = 753 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 76/485 (15%), Positives = 149/485 (30%), Gaps = 105/485 (21%) Query: 1006 MSAVNMLPESERPRVVGLGPTHRAVGEMRS-AGVDAQTLASFL-----HDTQLQQRSGET 1059 ++ V + ++++ R++ PT RA M G A+T+ L +L+ + ET Sbjct: 358 LNGVIKILKAQKKRILLCAPTGRAAKRMSDLTGEPARTIHRLLEVDFTAKGELKFKRNET 417 Query: 1060 PDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRS 1119 + + DE SMV M I + + GD++QL ++ G + Sbjct: 418 NPLPADVVIADEMSMVDALLMCSLVRAIKPT-SKFIMVGDSNQLPSVGAGNVLKDLIASH 476 Query: 1120 AADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEF 1179 +KEI RQ A SLI + R ++G P RQ + S+ Sbjct: 477 YIPSVELKEIFRQ------AAQSLIVTNAHRIVNG---EFPVLDDRQNDFFFMNKSLESD 527 Query: 1180 SHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRV 1239 +LA+ + D+ ++ Sbjct: 528 IAGLVIQLAKQRLPDTYGFSPIDDIQ-----------------------VLCPT------ 558 Query: 1240 LNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAG 1299 EL K+ + LN + EL+ D ++ N Y Sbjct: 559 -----KMGMAGTKELNKQ--LQSALNPPSQNKAELKFFDVIFRTGDKVMQTKNDY----- 606 Query: 1300 ISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVAN 1359 ++ ++ E + + + + V RF+++ Sbjct: 607 -----DVLWTKNNEKGSGIFNGDIGIIRSVD---------------RFSQN--------- 637 Query: 1360 SVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGT 1419 VT+ + + +H AYAIT H +QG+ I Sbjct: 638 ------------VTIDFEGRVAIYTSEMLRRLEH---AYAITIHKSQGSEYDAVIIPI-- 680 Query: 1420 EGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVM 1479 + Y ++R K+ + + + + +K + + P ++E+ Sbjct: 681 TAFTHNLLYRNLLYTGVTRAKK--MIIVIGTKELVKTMVDNNRKMLRYSLLRPLLEKEMN 738 Query: 1480 NAERL 1484 + Sbjct: 739 RKDTE 743 Score = 48.7 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 60/454 (13%), Positives = 131/454 (28%), Gaps = 106/454 (23%) Query: 449 VAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQL----LEGMAFTPGST 504 + ++ + + Q + + + A R+ M I ++ + F T Sbjct: 358 LNGVIKILKAQKKRILLCAPTGRAAKRMSDLTGEPARTIHRLLEVDFTAKGELKFKRNET 417 Query: 505 -------VIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQ--RTGTGSALMAMKDAGV 555 VI D+ + +L+ + +++ DS Q G G+ L + Sbjct: 418 NPLPADVVIADEMSMVDALLMCSLVRAIKPTSKFIMVGDSNQLPSVGAGNVLKDL----- 472 Query: 556 NTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIR 615 +A + SV+ E + I+T A R Sbjct: 473 ---------------------------IASHYIPSVELKE----IFRQAAQSLIVTNAHR 501 Query: 616 SELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVT 675 ++ + + + G+V++ R D Y + Sbjct: 502 -------IVNGEFPVLDDRQNDFF--FMNKSLESDIAGLVIQLAKQ--RLPDTYGFSPID 550 Query: 676 ------------AQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGK 723 A + L + Q ++ + S + F G+++ T Sbjct: 551 DIQVLCPTKMGMAGTKEL---NKQLQSALNPPSQNKAELKFFDVI---FRTGDKVMQTKN 604 Query: 724 I----------PGLRVSGGDRLQVASVS--EDAMTVVVPGRAEPATLPVSDSPFTALKLE 771 G + GD + SV +T+ GR T + +LE Sbjct: 605 DYDVLWTKNNEKGSGIFNGDIGIIRSVDRFSQNVTIDFEGRVAIYTSEM------LRRLE 658 Query: 772 NGWVETPGHSVSDSA-TVFASVTQMAMD----NATLNGLARSGRDVRLYSSLDETRTA-- 824 + + T S V +T + N G+ R+ + + + + + +T Sbjct: 659 HAYAITIHKSQGSEYDAVIIPITAFTHNLLYRNLLYTGVTRAKKMIIVIGTKELVKTMVD 718 Query: 825 --EKLARHPSFTVVSE-QIKTRAGETSLETAISH 855 K+ R+ + E ++ + E + + Sbjct: 719 NNRKMLRYSLLRPLLEKEMNRKDTEETDDEKTQS 752 >UniRef50_Q04B55 ATP-dependent DNA helicase, RecD/TraA family n=27 Tax=Lactobacillus RepID=Q04B55_LACDB Length = 796 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 53/275 (19%), Positives = 94/275 (34%), Gaps = 22/275 (8%) Query: 880 LAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYG----TGLLVSRA 935 LA + L E +++ N R D+ G A Sbjct: 221 LAVLLQALTMEGETYLELEELLPAAKELTNINFDRLAEAVNDLQDKKKVVVEEGRASLLA 280 Query: 936 SYEAEKSIL----RHILEGKEA------VMPLMERVPGELMEKLTSGQRAATRMILETSD 985 ++ E I+ + +GKEA + ++R +L Q+ A + + + Sbjct: 281 PFQVESEIVTDLEDLLAKGKEADYREKDLDQAIKRAERKLGISYDPEQKQAIKNAVTSP- 339 Query: 986 RFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLG----PTHRAVGEMRS-AGVDA 1040 +++ G G GKTT ++ + L + + PT RA M G A Sbjct: 340 -VSILTGGPGSGKTTIIDGILLVLKDLADMDEEEAEEAILLAAPTGRAAKRMEEVTGYPA 398 Query: 1041 QTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDT 1100 +T+ L E D + ++DE SMV + + I + V GD Sbjct: 399 KTIHRLLGLGIDNSEEMELNDLEGEILIVDEMSMVDIYLFEKLLSAI-SNVHHLVFVGDK 457 Query: 1101 DQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPE 1135 DQL ++ G+ F ++ + RQ + Sbjct: 458 DQLPSVGAGKVFADLIEADFIPTCQLQVVHRQKDD 492 Score = 65.6 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 66/170 (38%), Gaps = 23/170 (13%) Query: 1285 DALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDR 1344 D + ++ +Y GI+ + + R+I+P + + V + + R+ DR Sbjct: 547 DDIQVLGAMYRGDGGINSLNDTL--------QRVINPEKGNDKAVEAHG-ENFRLH--DR 595 Query: 1345 MRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQE--------QAEQHIDL 1396 + ++D ERG + V AV + L D ++ + ++ Sbjct: 596 VLQLQNDPERGIYNGEIGKVVAVDPE--MLEDEDDEVKLLVNFDGNEVAYTQADLNNLTR 653 Query: 1397 AYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVY 1446 AYAIT H +QG F + + +M Y A++R Q + + Sbjct: 654 AYAITIHKSQG--SEFPLVILCLTMQNYIMLKRNLLYTAITRASQKLVMV 701 >UniRef50_A6YFT0 Putative TraA n=1 Tax=Arthrobacter sp. Chr15 RepID=A6YFT0_9MICC Length = 1097 Score = 137 bits (345), Expect = 4e-30, Method: Composition-based stats. Identities = 132/912 (14%), Positives = 260/912 (28%), Gaps = 154/912 (16%) Query: 8 RSAGSAGNY----YTDKDNYYVLGSMGERWAGRGAEQL--GLQGSVDKDVFTRLLEGRL- 60 + SA Y + D YY+ G+ AE+ G GS+D +L Sbjct: 34 GTGASATAYLESDHHRADEYYLEED------GQLAERFVYGPSGSLDATDSLDAARYKLW 87 Query: 61 --------------PDGADLSRMQDGSNRHRPGY----DLTFSAPKSVSMMAMLGGD--K 100 P G R DG R P ++T + KS+S+ A L Sbjct: 88 VDWVDPDTGEVRGKPKGQARLRQDDGVVRDLPASPRFAEMTVNCDKSLSVAAALNPAVIA 147 Query: 101 RLIDAHNQAVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHA 160 L +A +A V A TRV V H TSR +P H H Sbjct: 148 ALDEAQREAAQAMSDFVAENAVTRVGPMRNQRLVKVERFESVAVVHKTSRAGDPHRHIHV 207 Query: 161 VVANVTQHNGEWKTLSSDK-VGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVG 219 G+W+ L + + + G + + + I E L+ + G+ + Sbjct: 208 QWNTRVFAEGKWRGLWTTPTLKQQGALRGIGESTIRS----HEGLRTALAQAGFTFD-TA 262 Query: 220 KHGMWEMPGVPVEAFSGRSQTIREAV------------GEDASLKSRDV----AALDTRK 263 + E+ E S R ++E + G++ S + R + A R Sbjct: 263 TGKVVELS-AHAELLSKRRAQVQENIARLEAAWRENHPGQEPSPEQRRIFDFQAWALDRP 321 Query: 264 SKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQA 323 K+ + E+ A W++ L+ G + + + LR L + V + + A Sbjct: 322 GKKAKNREVSQAGWIEELRAAGLPVAGFDGGSSAVRFLRDLDQEQIAAAAIAVCEGKSSA 381 Query: 324 IAGLSERKVQFTYTDVLARTVGILPPENGVIER-ARAGIDEA--ISREQLIPLDREKGLF 380 + L + + A + N I AR A IS + + Sbjct: 382 WS-LHQLQAAVADQVAEAGVIAERAELNAFISATARNAAQGARSISDPRDGHMPDHVRHI 440 Query: 381 TSGIHVLDELSVRA-LSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQ 439 TS + E ++A + ++ V + P + G + + V Sbjct: 441 TSERVIAVEDELKARFTARVVAGEEVHLDPGAFAATSLGQAQKHAAQIVASGCGLGVVEG 500 Query: 440 GGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQL------ 493 +G+ + E + +GR++ ++A + + + + Sbjct: 501 AAGSGKTTMLREAKKLLDAEGRQLVVLAPTLKGAQEAARSLEAAAFSVHKLLHANGFRWD 560 Query: 494 ------------------------LEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHN 529 T + V+VD+ L L L A ++ Sbjct: 561 ENGRYTRLKPGETDPNTGKMYRGPQGDYRLTKEARVVVDEAGMLDQDTALALTQLADQYG 620 Query: 530 VQVLITDSGQRTGT--------GSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYA 581 +++ + +A +A++ A ++ Q + R Sbjct: 621 AGLVLMGDRAQLPAVGRGGVLDHAAKIAVERADIDVVHRFTDAQYAELSLRMRSRQKPAE 680 Query: 582 RLAGDFAASVKAGEESVAQVSGVREQ-AILTQAIRSELKTQGVLGLPEVTMTALSPVWLD 640 + V +GV E +T ++T G + + Sbjct: 681 LFNDLYTRGH------VRIHTGVEEAVEAMTADAAQTIRTGGTVA-------------MA 721 Query: 641 SRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDS 700 + + + M + + R+ I V Sbjct: 722 TPTNEMATQINAVMQQQMSDAGRTREARFKIAGVDG------------------------ 757 Query: 701 SWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPV 760 + + G+ + L V+ + V + D V G+ + Sbjct: 758 ---------LTLRHGDTIMTRNNDTMLGVANRETYTVHTTHSDGSITVNQGKGKDMIRLP 808 Query: 761 SDSPFTALKLENGWVE--TPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSL 818 + + L E G + + + + + A R + + ++ Sbjct: 809 KEYVTQYVHLGYASTEYGAQGATETTGGGLLDATSSSAGGTYVAATRGREANTLHMVAAS 868 Query: 819 DETRTAEKLARH 830 E A+ + Sbjct: 869 TEDAQAQFVDIM 880 Score = 100 bits (249), Expect = 5e-19, Method: Composition-based stats. Identities = 94/504 (18%), Positives = 151/504 (29%), Gaps = 83/504 (16%) Query: 863 PAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQI-------KRG 915 +Q A+ V E K A+S+ L A + G E+NA I +G Sbjct: 363 DQEQIAAAAIAVCEGKSSAWSLHQL-QAAVADQVAEAGVIAERAELNAFISATARNAAQG 421 Query: 916 DLLYVDVAKGY---GTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSG 972 D G+ + S E + A + L Sbjct: 422 ARSISDPRDGHMPDHVRHITSERVIAVEDELKARFTARVVAGEEVHLDPGAFAATSLGQA 481 Query: 973 QRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGE 1032 Q+ A I+ + VV+G AG GKTT R L ++E ++V L PT + E Sbjct: 482 QKHAA-QIVASGCGLGVVEGAAGSGKTTMLRE----AKKLLDAEGRQLVVLAPTLKGAQE 536 Query: 1033 M-RSAGVDAQTLASFLHDTQLQQRS------------------------GETPDFSNTLF 1067 RS A ++ LH + G+ Sbjct: 537 AARSLEAAAFSVHKLLHANGFRWDENGRYTRLKPGETDPNTGKMYRGPQGDYRLTKEARV 596 Query: 1068 LLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMK 1127 ++DE+ M+ L G V GD QL A+ G Sbjct: 597 VVDEAGMLDQDTALALTQLADQYGAGLVLMGDRAQLPAVGRGGVL--------------- 641 Query: 1128 EIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKL 1187 A +E V R A E S+ S + A+L Sbjct: 642 --------------------DHAAKIAVERADIDVVHRFTDAQYAELSLRMRSRQKPAEL 681 Query: 1188 AEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDV 1247 EA+ D +T + T NE +N+++ Sbjct: 682 FN--DLYTRGHVRIHTGVEEAVEAMTAD-AAQTIRTGGTVAMATPTNEMATQINAVMQQQ 738 Query: 1248 REKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLI 1307 AG + + + ++ +R G+ + + D ++ V N + DG I Sbjct: 739 MSDAGRTREARFKIAGVDGLTLRHGD----TIMTRNNDTMLGVANRETYTVHTTHSDGSI 794 Query: 1308 TLQDAEGNTRLISPREAVAEGVTL 1331 T+ +G + P+E V + V L Sbjct: 795 TVNQGKGKDMIRLPKEYVTQYVHL 818 Score = 68.3 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 34/147 (23%), Positives = 60/147 (40%), Gaps = 6/147 (4%) Query: 1296 RIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERG 1355 +A + + + T +A ++ + D + + GD + +D G Sbjct: 717 TVAMATPTNEMATQINAVMQQQMSDAGRTREARFKIAGVDGLTLRHGDTIMTRNNDTMLG 776 Query: 1356 YVANSVWTVTAV-SGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAI 1414 +TV S S+T++ G+ IR +E Q++ L YA T +GAQGA+ET Sbjct: 777 VANRETYTVHTTHSDGSITVNQGKGKDMIRLPKEYVTQYVHLGYASTEYGAQGATETTGG 836 Query: 1415 ALEGTEGNRKLMAGFESAYVALSRMKQ 1441 L + YVA +R ++ Sbjct: 837 GLLDATSSSAGGT-----YVAATRGRE 858 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P22706 Protein traI n=96 Tax=root RepID=TRAI2_ECOLX 1462 0.0 UniRef50_D2U4N9 Conjugal transfer nickase/helicase (Fragment) n=... 1178 0.0 UniRef50_D1S139 Protein TraI n=1 Tax=Serratia odorifera 4Rx13 Re... 1083 0.0 UniRef50_B6ICH5 TraI protein n=1 Tax=Escherichia coli SE11 RepID... 1070 0.0 UniRef50_B2VB36 TraI protein n=1 Tax=Erwinia tasmaniensis RepID=... 869 0.0 UniRef50_A9L6G5 Conjugative transfer relaxase protein TraI n=7 T... 843 0.0 UniRef50_B6ESZ2 Protein TraI (DNA helicase I) n=1 Tax=Aliivibrio... 819 0.0 UniRef50_D1RMM7 Conjugative transfer relaxase protein TraI n=2 T... 808 0.0 UniRef50_D0Z588 IncF plasmid conjugative transfer DNA-nicking an... 795 0.0 UniRef50_Q8D674 ATP-dependent exoDNAse, alpha subunit n=14 Tax=V... 776 0.0 UniRef50_C9NPT5 Putative conjugative transfer protein TraI n=1 T... 764 0.0 UniRef50_A4WGU6 ATP-dependent exoDNAse (Exonuclease V) alpha sub... 747 0.0 UniRef50_C8QEC8 Conjugative transfer relaxase protein TraI n=2 T... 726 0.0 UniRef50_B0RKM2 Mobilization protein TraI n=3 Tax=Yersinia RepID... 714 0.0 UniRef50_B2JAG8 ATP-dependent exoDNAse (Exonuclease V) alpha sub... 557 e-156 UniRef50_B1X3A0 Putative TrwC/TraI protein n=2 Tax=Cyanothece Re... 549 e-154 UniRef50_Q5ZTT4 TraI n=1 Tax=Legionella pneumophila subsp. pneum... 546 e-153 UniRef50_Q8YK83 Alr8034 protein n=2 Tax=Nostoc RepID=Q8YK83_ANASP 528 e-148 UniRef50_Q5WRX6 Putative uncharacterized protein n=1 Tax=Legione... 515 e-144 UniRef50_B7KMV0 Conjugative relaxase domain protein n=1 Tax=Cyan... 500 e-139 UniRef50_B4WV74 TrwC relaxase family n=4 Tax=Synechococcus sp. P... 494 e-137 UniRef50_C7PJH8 Conjugative relaxase domain protein n=1 Tax=Chit... 492 e-137 UniRef50_Q0HXX9 TrwC protein n=1 Tax=Shewanella sp. MR-7 RepID=Q... 488 e-136 UniRef50_B1XRA4 DNA helicase, TrwC and TraI like protein n=1 Tax... 484 e-134 UniRef50_UPI00016ACDBF TrwC protein n=1 Tax=Burkholderia thailan... 484 e-134 UniRef50_A8ZNG7 Putative uncharacterized protein n=2 Tax=Acaryoc... 478 e-133 UniRef50_Q9X4G2 Mobilization protein TraI n=10 Tax=root RepID=Q9... 474 e-131 UniRef50_A5VG54 Conjugative relaxase region-like protein n=2 Tax... 471 e-131 UniRef50_C1F5K2 Conjugative relaxase domain protein n=4 Tax=Acid... 471 e-130 UniRef50_A4LST4 TrwC protein n=10 Tax=Proteobacteria RepID=A4LST... 471 e-130 UniRef50_A8ZPV0 Putative uncharacterized protein n=1 Tax=Acaryoc... 469 e-130 UniRef50_C0A2R1 Conjugative relaxase domain protein n=2 Tax=Opit... 469 e-130 UniRef50_Q30Q32 ATP-dependent exoDNAse (Exonuclease V) alpha sub... 469 e-130 UniRef50_C5ANZ1 TrwC protein n=2 Tax=Burkholderia glumae BGR1 Re... 465 e-129 UniRef50_A0B527 TrwC protein n=3 Tax=Burkholderiales RepID=A0B52... 463 e-128 UniRef50_Q2NKF7 TrwC protein n=6 Tax=Proteobacteria RepID=Q2NKF7... 462 e-128 UniRef50_D2QCL6 Conjugative relaxase domain protein n=1 Tax=Spir... 462 e-128 UniRef50_B8HZ01 Conjugative relaxase domain protein n=1 Tax=Cyan... 461 e-127 UniRef50_B5JHM8 TrwC relaxase family n=1 Tax=Verrucomicrobiae ba... 455 e-126 UniRef50_Q3SHW0 TrwC protein n=1 Tax=Thiobacillus denitrificans ... 442 e-122 UniRef50_A6Q5N5 Putative uncharacterized protein n=1 Tax=Nitrati... 441 e-122 UniRef50_B1X2J5 Putative TrwC/TraI protein n=1 Tax=Cyanothece sp... 440 e-121 UniRef50_Q2NBK6 TrwC protein n=7 Tax=Sphingomonadales RepID=Q2NB... 436 e-120 UniRef50_UPI00016C3594 TrwC protein n=1 Tax=Gemmata obscuriglobu... 435 e-120 UniRef50_A8ZLG3 Putative uncharacterized protein n=3 Tax=Acaryoc... 434 e-119 UniRef50_A8ZL36 Putative uncharacterized protein n=2 Tax=Acaryoc... 433 e-119 UniRef50_B8GZQ5 DNA relaxase/conjugal transfer nickase-helicase ... 430 e-118 UniRef50_Q0KJG8 DNA helicase n=3 Tax=Sphingomonadaceae RepID=Q0K... 427 e-117 UniRef50_Q1N8W9 TrwC protein n=1 Tax=Sphingomonas sp. SKA58 RepI... 426 e-117 UniRef50_B6ASB0 Conjugal transfer protein, TraA n=6 Tax=Leptospi... 422 e-116 UniRef50_D0KZB2 Conjugative relaxase domain protein n=1 Tax=Halo... 421 e-115 UniRef50_A3ZVN0 Putative uncharacterized protein n=1 Tax=Blastop... 421 e-115 UniRef50_A3VN00 TrwC protein n=1 Tax=Parvularcula bermudensis HT... 419 e-115 UniRef50_B6ALF3 Putative mobilization protein TraA n=1 Tax=Lepto... 419 e-115 UniRef50_Q1NH26 Putative uncharacterized protein n=1 Tax=Sphingo... 419 e-115 UniRef50_B1ZY28 Conjugative relaxase domain protein n=1 Tax=Opit... 416 e-114 UniRef50_B6AM13 Putative uncharacterized protein n=1 Tax=Leptosp... 410 e-112 UniRef50_UPI00016C4B0F TrwC protein n=1 Tax=Gemmata obscuriglobu... 407 e-111 UniRef50_C7HYW1 Conjugative relaxase domain protein n=1 Tax=Thio... 405 e-110 UniRef50_A3EUE2 Probable TrwC protein n=2 Tax=Leptospirillum sp.... 403 e-110 UniRef50_C5SIG5 Conjugative relaxase domain protein n=1 Tax=Asti... 388 e-106 UniRef50_Q3SI89 Putative ATP-dependent exoDNAse (Exonuclease V) ... 382 e-104 UniRef50_B1ZQ33 Conjugative relaxase domain protein n=2 Tax=Opit... 372 e-101 UniRef50_A9I2Z2 Conjugal transfer protein n=1 Tax=Bordetella pet... 363 3e-98 UniRef50_C0E195 Putative uncharacterized protein n=1 Tax=Coryneb... 359 7e-97 UniRef50_C5A9A9 Putative ATP-dependent exoDNAse (Exonuclease V) ... 354 2e-95 UniRef50_D0YT16 DNA primase catalytic core n=1 Tax=Mobiluncus mu... 353 5e-95 UniRef50_C6DZ94 Conjugative relaxase domain protein n=1 Tax=Geob... 352 9e-95 UniRef50_C0QEU8 RecD1 n=2 Tax=Desulfobacterales RepID=C0QEU8_DESAH 349 7e-94 UniRef50_B9MIL4 Conjugative relaxase domain protein n=1 Tax=Diap... 348 1e-93 UniRef50_D1BL70 TrwC relaxase n=1 Tax=Veillonella parvula DSM 20... 345 9e-93 UniRef50_C9CRW2 TraI n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9... 345 1e-92 UniRef50_A9KH87 DNA helicase n=9 Tax=Coxiella burnetii RepID=A9K... 337 3e-90 UniRef50_A4JFK5 ATP-dependent exoDNAse (Exonuclease V) alpha sub... 333 6e-89 UniRef50_Q84GD9 TraA n=5 Tax=Corynebacterium glutamicum RepID=Q8... 329 6e-88 UniRef50_Q8RMJ7 TraA n=3 Tax=Corynebacterium RepID=Q8RMJ7_CORDI 326 5e-87 UniRef50_B3GW66 TraA Protein n=3 Tax=Corynebacterium RepID=B3GW6... 317 2e-84 UniRef50_Q0ZKG3 Putative uncharacterized protein n=1 Tax=Coryneb... 317 3e-84 UniRef50_A5ESN8 Putative ATP-dependent exoDNAse n=1 Tax=Bradyrhi... 315 1e-83 UniRef50_D2S894 TrwC relaxase n=1 Tax=Geodermatophilus obscurus ... 311 2e-82 UniRef50_B2FKA4 Putative conjugal transfer protein TraA n=1 Tax=... 311 2e-82 UniRef50_C8NSP3 Putative uncharacterized protein n=3 Tax=Coryneb... 310 4e-82 UniRef50_D0SGZ5 TrwC protein n=1 Tax=Acinetobacter johnsonii SH0... 310 4e-82 UniRef50_A1SIX0 DNA primase catalytic core, N-terminal domain n=... 308 1e-81 UniRef50_A1RCJ2 Putative TraA-like conjugal transfer protein n=1... 308 1e-81 UniRef50_C3JH47 DNA primase catalytic core domain protein n=1 Ta... 306 6e-81 UniRef50_A1SH09 DNA primase catalytic core, N-terminal domain n=... 305 8e-81 UniRef50_B3DCU7 Relaxase n=2 Tax=Burkholderia multivorans ATCC 1... 301 2e-79 UniRef50_UPI00005104AE conjugative relaxase domain protein, TrwC... 300 3e-79 UniRef50_B8KYV8 Putative trwC protein n=1 Tax=Stenotrophomonas s... 300 4e-79 UniRef50_A3TJZ6 Transfer protein Tra-like n=1 Tax=Janibacter sp.... 296 7e-78 UniRef50_B2TH74 Conjugative relaxase domain protein n=1 Tax=Burk... 294 2e-77 UniRef50_A5CLM4 Putative conjugal transfer protein, Dtr system n... 293 3e-77 UniRef50_D2Q9V3 TrwC relaxase n=2 Tax=Bifidobacterium dentium Re... 291 1e-76 UniRef50_C7CNC3 Putative uncharacterized protein n=1 Tax=Methylo... 290 3e-76 UniRef50_C7NLP0 TrwC relaxase n=9 Tax=Actinomycetales RepID=C7NL... 289 7e-76 UniRef50_UPI0001AF46AC exonuclease V subunit alpha n=1 Tax=Mycob... 288 2e-75 UniRef50_Q6X3G0 TraA n=4 Tax=Gammaproteobacteria RepID=Q6X3G0_PSEAE 287 2e-75 UniRef50_C4DRT0 TrwC relaxase n=1 Tax=Stackebrandtia nassauensis... 287 4e-75 UniRef50_A4T240 ATP-dependent exoDNAse (Exonuclease V) alpha sub... 285 9e-75 UniRef50_A1RCJ6 Toprim domain n=5 Tax=Actinomycetales RepID=A1RC... 283 3e-74 UniRef50_C8XHE2 TrwC relaxase n=1 Tax=Nakamurella multipartita D... 283 5e-74 UniRef50_A9KS02 Helicase, RecD/TraA family n=32 Tax=Bacteria Rep... 282 1e-73 UniRef50_A3ZP08 Putative uncharacterized protein n=1 Tax=Blastop... 281 1e-73 UniRef50_B1MAE8 TraA/ATP-dependent exoDNAse/relaxase n=9 Tax=Myc... 279 8e-73 UniRef50_Q6SK28 TraA-like protein n=2 Tax=Arthrobacter aurescens... 277 3e-72 UniRef50_UPI0000E0F58B exodeoxyribonuclease V, alpha subunit n=1... 277 4e-72 UniRef50_Q1HG56 TraA n=1 Tax=Rhodococcus erythropolis RepID=Q1HG... 277 4e-72 UniRef50_C5EA62 ATP-dependent exoDNAse n=2 Tax=Bifidobacterium l... 277 4e-72 UniRef50_B8I4C3 Exonuclease V subunit alpha n=1 Tax=Clostridium ... 276 4e-72 UniRef50_Q70K35 Putative TraA protein n=1 Tax=Gordonia westfalic... 276 4e-72 UniRef50_Q9ETQ3 Conjugal transfer protein n=5 Tax=cellular organ... 276 5e-72 UniRef50_Q2LTC7 Exodeoxyribonuclease V alpha chain n=1 Tax=Syntr... 276 5e-72 UniRef50_C2AI56 TrwC relaxase n=1 Tax=Tsukamurella paurometabola... 274 3e-71 UniRef50_A6TL79 Helicase, RecD/TraA family n=35 Tax=Bacteria Rep... 273 5e-71 UniRef50_B2I3X3 TrwC protein n=1 Tax=Acinetobacter baumannii ACI... 271 2e-70 UniRef50_Q3HKI6 TraI n=2 Tax=Rhodobacteraceae RepID=Q3HKI6_RHOS4 269 5e-70 UniRef50_B4VXL3 Putative uncharacterized protein n=1 Tax=Microco... 269 6e-70 UniRef50_B1M9U8 Conjugative relaxase domain protein n=5 Tax=Alph... 268 1e-69 UniRef50_C7IID4 Exonuclease V subunit alpha n=1 Tax=Clostridium ... 268 1e-69 UniRef50_Q3AB49 Helicase, RecD/TraA family n=1 Tax=Carboxydother... 268 2e-69 UniRef50_D0LFJ6 TrwC relaxase n=1 Tax=Gordonia bronchialis DSM 4... 267 3e-69 UniRef50_Q0QW05 Putative uncharacterized protein n=1 Tax=Neisser... 267 3e-69 UniRef50_UPI00016C0EC6 helicase, RecD/TraA family protein n=1 Ta... 261 2e-67 UniRef50_C4DCY8 TrwC relaxase n=1 Tax=Stackebrandtia nassauensis... 261 2e-67 UniRef50_A4XG10 ATP-dependent DNA helicase, RecD/TraA family n=2... 261 3e-67 UniRef50_Q58IS3 Putative uncharacterized protein n=2 Tax=Strepto... 261 3e-67 UniRef50_C2KY21 Possible exodeoxyribonuclease V alpha subunit n=... 260 3e-67 UniRef50_C7Q5H7 TrwC relaxase n=1 Tax=Catenulispora acidiphila D... 260 3e-67 UniRef50_B9NXA5 Putative MobA/MobL protein n=1 Tax=Rhodobacterac... 259 6e-67 UniRef50_A6YFT0 Putative TraA n=1 Tax=Arthrobacter sp. Chr15 Rep... 259 6e-67 UniRef50_A0R7T4 ATPase n=1 Tax=Pelobacter propionicus DSM 2379 R... 259 7e-67 UniRef50_Q0RC71 Putative uncharacterized protein n=2 Tax=Frankia... 259 9e-67 UniRef50_A8ZPA5 TrwC protein, putative n=1 Tax=Acaryochloris mar... 258 1e-66 UniRef50_Q5QUQ9 ATP-dependent exoDNAse (Exonuclease V), alpha su... 257 3e-66 UniRef50_UPI0001C37B34 RecD/TraA family helicase n=1 Tax=Ruminoc... 257 3e-66 UniRef50_B0MLK7 Putative uncharacterized protein n=1 Tax=Eubacte... 257 4e-66 UniRef50_Q58IP1 Putative uncharacterized protein n=1 Tax=Strepto... 255 9e-66 UniRef50_Q1WTZ7 Exodeoxyribonuclease V alpha chain n=2 Tax=Lacto... 255 1e-65 UniRef50_C6AF24 Conjugal transfer protein TraA n=2 Tax=Bartonell... 254 2e-65 UniRef50_Q0BRZ0 TraI protein (DNA helicase I) n=1 Tax=Granulibac... 254 3e-65 UniRef50_B9M4M2 Exodeoxyribonuclease V, alpha subunit n=8 Tax=De... 254 3e-65 UniRef50_B3E889 Exodeoxyribonuclease V n=2 Tax=Bacteria RepID=B3... 253 7e-65 UniRef50_Q7CW18 Conjugation protein n=8 Tax=Bacteria RepID=Q7CW1... 252 9e-65 UniRef50_A8ZX10 Exodeoxyribonuclease V, alpha subunit n=1 Tax=De... 251 1e-64 UniRef50_A1SFN3 ATP-dependent exoDNAse (Exonuclease V) alpha sub... 251 2e-64 UniRef50_C8PVE9 Exodeoxyribonuclease V, alpha subunit n=1 Tax=En... 250 5e-64 UniRef50_UPI00016C53CF TrwC protein n=1 Tax=Gemmata obscuriglobu... 249 6e-64 UniRef50_P55418 Probable conjugal transfer protein traA n=16 Tax... 249 6e-64 UniRef50_B9QRK8 Ti-type conjugative transfer relaxase TraA, puta... 249 6e-64 UniRef50_B4V4K9 Putative uncharacterized protein n=1 Tax=Strepto... 249 1e-63 UniRef50_B8FB95 Exodeoxyribonuclease V, alpha subunit n=1 Tax=De... 248 1e-63 UniRef50_UPI0001AEC2FF exodeoxyribonuclease V, alpha subunit n=1... 247 2e-63 UniRef50_A3WKH6 ATP-dependent exoDNAse (Exonuclease V), alpha su... 247 3e-63 UniRef50_B5YII1 Putative uncharacterized protein n=1 Tax=Thermod... 247 3e-63 UniRef50_A5WER9 Exodeoxyribonuclease V, alpha subunit n=3 Tax=Ps... 247 4e-63 UniRef50_C3CUT3 Helicase, RecD/TraA n=1 Tax=Bacillus thuringiens... 245 1e-62 UniRef50_Q3IJ15 Exonuclease V, alpha chain with recC and recD: 5... 244 2e-62 UniRef50_UPI000050FF73 TrwC relaxase n=1 Tax=Brevibacterium line... 244 3e-62 UniRef50_B4RTM2 Exodeoxyribonuclease V, alpha subunit n=1 Tax=Al... 244 3e-62 UniRef50_A3ZSA6 Possible Viral (Superfamily 1) RNA helicase n=1 ... 243 4e-62 UniRef50_Q480P0 Exodeoxyribonuclease V, alpha subunit n=1 Tax=Co... 243 4e-62 UniRef50_C2AVA8 TrwC relaxase n=1 Tax=Tsukamurella paurometabola... 242 6e-62 UniRef50_A5N3G4 Predicted exodeoxyribonuclease n=26 Tax=Clostrid... 242 1e-61 UniRef50_A8SRT9 Putative uncharacterized protein n=1 Tax=Coproco... 242 1e-61 UniRef50_C8NA26 Probable exonuclease V, alpha subunit n=1 Tax=Ca... 242 1e-61 UniRef50_A8ZLV4 Helicase, RecD/TraA family n=18 Tax=Cyanobacteri... 241 2e-61 UniRef50_C7NFC4 TrwC relaxase n=1 Tax=Kytococcus sedentarius DSM... 241 2e-61 UniRef50_Q6MDD6 Putative exodeoxyribonuclease V n=1 Tax=Candidat... 240 5e-61 UniRef50_A3FG49 ORF16 n=1 Tax=Amycolatopsis benzoatilytica RepID... 240 5e-61 UniRef50_Q04YR4 Exodeoxyribonuclease V, alpha subunit n=4 Tax=Le... 239 1e-60 UniRef50_Q30PF5 ATPase n=2 Tax=Campylobacterales RepID=Q30PF5_SULDN 238 1e-60 UniRef50_Q6FF15 Exonuclease V, alpha subunit n=11 Tax=Acinetobac... 238 1e-60 UniRef50_C7RK95 Helicase, RecD/TraA family n=1 Tax=Candidatus Ac... 238 1e-60 UniRef50_A4JFN0 AAA ATPase n=1 Tax=Burkholderia vietnamiensis G4... 237 4e-60 UniRef50_D1GQF3 Phage protein n=2 Tax=Staphylococcus RepID=D1GQF... 236 7e-60 UniRef50_C7IFQ7 AAA ATPase n=1 Tax=Clostridium papyrosolvens DSM... 236 8e-60 UniRef50_C0QI06 RecD2 n=2 Tax=Desulfobacterium autotrophicum HRM... 236 9e-60 UniRef50_C0N790 Exodeoxyribonuclease V, alpha subunit n=1 Tax=Me... 235 1e-59 UniRef50_D2SC15 TrwC relaxase n=4 Tax=Geodermatophilus obscurus ... 235 1e-59 UniRef50_Q83YK2 Putative uncharacterized protein n=1 Tax=Bifidob... 233 6e-59 UniRef50_D1R7Z3 Putative uncharacterized protein n=1 Tax=Parachl... 233 6e-59 UniRef50_C5CL22 Exodeoxyribonuclease V, alpha subunit n=3 Tax=Be... 232 9e-59 UniRef50_Q1EQM4 Putative conjugal transfer protein n=1 Tax=Strep... 232 1e-58 UniRef50_A3MYX5 Exodeoxyribonuclease V alpha chain n=11 Tax=Past... 231 1e-58 UniRef50_A7K3N3 Exodeoxyribonuclease V alpha chain n=60 Tax=Gamm... 231 2e-58 UniRef50_B3EIT2 Helicase, RecD/TraA family n=13 Tax=Bacteria Rep... 230 4e-58 UniRef50_A7FFE8 Exodeoxyribonuclease V, alpha subunit n=30 Tax=E... 230 4e-58 UniRef50_C6RJX0 Putative MobA/MobL protein n=1 Tax=Acinetobacter... 230 4e-58 UniRef50_B7KWK3 Helicase, RecD/TraA family n=16 Tax=Bacteria Rep... 229 6e-58 UniRef50_A1TWJ9 Exodeoxyribonuclease V, alpha subunit n=2 Tax=Ma... 229 8e-58 UniRef50_A8EUL3 Exodeoxyribonuclease V, alpha subunit n=1 Tax=Ar... 229 8e-58 UniRef50_A6DNF1 Exonuclease V (RecBCD complex), alpha chain n=1 ... 229 9e-58 UniRef50_D0IXL7 Exodeoxyribonuclease V, alpha subunit n=2 Tax=Co... 229 1e-57 UniRef50_B1C665 Putative uncharacterized protein n=1 Tax=Anaerof... 228 2e-57 UniRef50_A3YGD9 Exodeoxyribonuclease V alpha chain n=1 Tax=Marin... 228 2e-57 UniRef50_A4AB31 Putative uncharacterized protein n=1 Tax=Congreg... 228 2e-57 UniRef50_Q0VNI0 Exodeoxyribonuclease V alpha chain n=1 Tax=Alcan... 227 2e-57 UniRef50_B0P898 Putative uncharacterized protein n=3 Tax=Bacteri... 227 4e-57 UniRef50_C4K847 Exonuclease V (RecBCD complex), alpha chain n=18... 227 4e-57 UniRef50_B5JRL2 Exodeoxyribonuclease V, alpha subunit n=1 Tax=ga... 226 6e-57 UniRef50_D1VA45 TrwC relaxase n=1 Tax=Frankia sp. EuI1c RepID=D1... 226 7e-57 UniRef50_Q46K41 DNA helicase/exodeoxyribonuclease V, alpha subun... 226 8e-57 UniRef50_C4L7B4 Exodeoxyribonuclease V, alpha subunit n=1 Tax=To... 226 1e-56 UniRef50_A8L8Y0 TrwC relaxase n=1 Tax=Frankia sp. EAN1pec RepID=... 226 1e-56 UniRef50_A6DHN1 ATP-dependent exoDNAse (Exonuclease V), alpha su... 226 1e-56 UniRef50_Q3B2W0 Helicase RecD/TraA n=19 Tax=Bacteria RepID=Q3B2W... 225 1e-56 UniRef50_B0SIS5 Exodeoxyribonuclease V, alpha subunit n=2 Tax=Le... 225 1e-56 UniRef50_A6W0A8 Exodeoxyribonuclease V, alpha subunit n=1 Tax=Ma... 224 2e-56 UniRef50_Q21BL3 Putative ATP-dependent exoDNAse (Exonuclease V) ... 224 2e-56 UniRef50_Q6N7J7 Possible Viral (Superfamily 1) RNA helicase n=1 ... 224 3e-56 UniRef50_Q44349 Conjugal transfer protein traA n=12 Tax=Rhizobia... 224 3e-56 UniRef50_Q314D9 ATP-dependent DNA helicase, RecD/TraA family n=1... 223 4e-56 UniRef50_P04993 Exodeoxyribonuclease V alpha chain n=123 Tax=Ent... 223 4e-56 UniRef50_B5EPU7 Exodeoxyribonuclease V, alpha subunit n=2 Tax=Ac... 223 5e-56 UniRef50_C6NU54 Exodeoxyribonuclease V alpha chain n=1 Tax=Acidi... 223 6e-56 UniRef50_D1T987 Exodeoxyribonuclease V, alpha subunit n=1 Tax=Bu... 222 1e-55 UniRef50_D0LWH5 Exodeoxyribonuclease V n=1 Tax=Haliangium ochrac... 222 1e-55 UniRef50_B1XZ26 Exodeoxyribonuclease V, alpha subunit n=4 Tax=ce... 222 1e-55 UniRef50_A2C8A4 Possible exodeoxyribonuclease V 67 kD polypeptid... 221 2e-55 UniRef50_A8QYS1 TraA protein n=1 Tax=Fluoribacter dumoffii RepID... 221 3e-55 UniRef50_B2IL44 TrwC relaxase n=9 Tax=Alphaproteobacteria RepID=... 220 4e-55 UniRef50_Q5HXP7 Conjugal transfer protein TraA n=1 Tax=Gluconoba... 220 4e-55 UniRef50_C5RAF5 Exodeoxyribonuclease V alpha subunit n=1 Tax=Wei... 219 7e-55 UniRef50_D0L8X2 Exodeoxyribonuclease V, alpha subunit n=2 Tax=Co... 219 8e-55 UniRef50_A9L0I2 Exodeoxyribonuclease V, alpha subunit n=12 Tax=S... 219 8e-55 UniRef50_C4WLD2 Ti-type conjugative transfer relaxase TraA n=1 T... 219 1e-54 UniRef50_D1N1Q4 Exodeoxyribonuclease V, alpha subunit n=1 Tax=Vi... 218 2e-54 UniRef50_Q140W3 Exodeoxyribonuclease V, alpha subunit n=3 Tax=Bu... 217 4e-54 UniRef50_B2A8J3 Helicase, RecD/TraA family n=2 Tax=Clostridia Re... 216 6e-54 UniRef50_P45158 Exodeoxyribonuclease V alpha chain n=19 Tax=Past... 216 8e-54 UniRef50_Q2J7P7 Putative uncharacterized protein n=1 Tax=Frankia... 216 1e-53 UniRef50_Q2BKD7 Exodeoxyribonuclease V alpha chain n=1 Tax=Neptu... 215 1e-53 UniRef50_D1N4L7 Conjugative relaxase domain protein n=2 Tax=Vict... 215 1e-53 UniRef50_C1MI09 Predicted protein n=1 Tax=Micromonas pusilla CCM... 215 2e-53 UniRef50_Q036N8 ATP-dependent DNA helicase, RecD/TraA family n=9... 214 3e-53 UniRef50_A7ABF9 Putative uncharacterized protein n=2 Tax=Bactero... 213 5e-53 UniRef50_C3QZL9 ATP-dependent exoDNAse n=20 Tax=Bacteroidales Re... 213 5e-53 UniRef50_B1I2W6 Helicase, RecD/TraA family n=1 Tax=Candidatus De... 212 7e-53 UniRef50_B1VNB9 Putative exodeoxyribonuclease-like protein n=1 T... 212 1e-52 UniRef50_C0VHS0 Exonuclease V alpha subunit n=7 Tax=Acinetobacte... 211 2e-52 UniRef50_D1A5Y8 Helicase, RecD/TraA family n=15 Tax=Bacteria Rep... 211 2e-52 UniRef50_Q15V09 DNA helicase/exodeoxyribonuclease V, alpha subun... 211 2e-52 UniRef50_A5FUA1 ATP-dependent exoDNAse (Exonuclease V) alpha sub... 211 2e-52 UniRef50_Q310C7 ATP-dependent DNA helicase, RecD/TraA family n=4... 211 3e-52 UniRef50_B2JKV2 Exodeoxyribonuclease V, alpha subunit n=2 Tax=Bu... 211 3e-52 UniRef50_C4XNH4 Conjugal transfer protein TraA n=1 Tax=Desulfovi... 211 3e-52 UniRef50_C1D6T5 Exonuclease V alpha subunit RecD n=1 Tax=Laribac... 211 3e-52 UniRef50_Q58914 Uncharacterized protein MJ1519 n=1 Tax=Methanoca... 210 3e-52 UniRef50_C3CTA5 Helicase RecD/TraA n=1 Tax=Bacillus thuringiensi... 210 4e-52 Sequences not found previously or not previously below threshold: >UniRef50_P22706 Protein traI n=96 Tax=root RepID=TRAI2_ECOLX Length = 1756 Score = 1462 bits (3785), Expect = 0.0, Method: Composition-based stats. Identities = 1686/1756 (96%), Positives = 1718/1756 (97%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRL 60 M+S + V+SAGSAGNYYTDKDNYYVLGSMGERWAG+GAEQLGLQGSVDKDVFTRLLEGRL Sbjct: 1 MLSFSVVKSAGSAGNYYTDKDNYYVLGSMGERWAGQGAEQLGLQGSVDKDVFTRLLEGRL 60 Query: 61 PDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEAL 120 PDGADLSRMQDGSN+HRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEAL Sbjct: 61 PDGADLSRMQDGSNKHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEAL 120 Query: 121 ASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDKV 180 ASTRVMTDGQSETVLTGNLVMALFNHDTSRDQ+PQLHTH VVANVTQHNGEWKTLSSDKV Sbjct: 121 ASTRVMTDGQSETVLTGNLVMALFNHDTSRDQDPQLHTHVVVANVTQHNGEWKTLSSDKV 180 Query: 181 GKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVEAFSGRSQT 240 GKTGF ENV AN+IAFG++Y+ +L+++VEALGYETEVVGKHGMWEMPGVPVEAFS RSQ Sbjct: 181 GKTGFSENVLANRIAFGKIYQSELRQRVEALGYETEVVGKHGMWEMPGVPVEAFSSRSQA 240 Query: 241 IREAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRAD 300 IREAVGEDASLKSRDVAALDTRKSK HVDPE++MAEWMQTLKETGFDIRAYRDAADQRA+ Sbjct: 241 IREAVGEDASLKSRDVAALDTRKSKHHVDPEVRMAEWMQTLKETGFDIRAYRDAADQRAE 300 Query: 301 LRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAG 360 +RT PGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAG Sbjct: 301 IRTQAPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAG 360 Query: 361 IDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYS 420 IDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYS Sbjct: 361 IDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYS 420 Query: 421 DAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDE 480 DAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQ+N+KQDE Sbjct: 421 DAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQLNLKQDE 480 Query: 481 RLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR 540 RLSGELITGRRQL EGM FT GST IVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR Sbjct: 481 RLSGELITGRRQLQEGMVFTSGSTFIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR 540 Query: 541 TGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQ 600 TGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRY RLAGDFAASVKAGEESVAQ Sbjct: 541 TGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYDRLAGDFAASVKAGEESVAQ 600 Query: 601 VSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWN 660 VSGVREQAILTQAIRSELKTQGVLG PEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWN Sbjct: 601 VSGVREQAILTQAIRSELKTQGVLGHPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWN 660 Query: 661 PETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRV 720 PETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRV Sbjct: 661 PETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRV 720 Query: 721 TGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGH 780 TGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPV+DSPFTALKLENGWVETPGH Sbjct: 721 TGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVADSPFTALKLENGWVETPGH 780 Query: 781 SVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQI 840 SVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQI Sbjct: 781 SVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQI 840 Query: 841 KTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTG 900 K RAGETSLETAIS QK+ LHTPAQQAIHLALPV+ESK LAFSMVDLLTEAKSFAAEGTG Sbjct: 841 KARAGETSLETAISLQKTGLHTPAQQAIHLALPVLESKNLAFSMVDLLTEAKSFAAEGTG 900 Query: 901 FTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMER 960 FTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAV PLMER Sbjct: 901 FTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVTPLMER 960 Query: 961 VPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRV 1020 VPGELME LTSG RAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLP SERPRV Sbjct: 961 VPGELMETLTSGPRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPASERPRV 1020 Query: 1021 VGLGPTHRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDM 1080 VGLGPTHRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDM Sbjct: 1021 VGLGPTHRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDM 1080 Query: 1081 ARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAV 1140 ARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADV IMKEIVRQTPELREAV Sbjct: 1081 ARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVVIMKEIVRQTPELREAV 1140 Query: 1141 YSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEA 1200 YSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGE Sbjct: 1141 YSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGET 1200 Query: 1201 FPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVM 1260 FPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHD REKAGELGKEQVM Sbjct: 1201 FPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDAREKAGELGKEQVM 1260 Query: 1261 VPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLIS 1320 VPVLNTANIRDGELRRLSTWE + DAL LVD+VYHRIAGISKDDGLITL+DAEGNTRLIS Sbjct: 1261 VPVLNTANIRDGELRRLSTWENNPDALALVDSVYHRIAGISKDDGLITLEDAEGNTRLIS 1320 Query: 1321 PREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQT 1380 PREAVAEGVTLYTPD IRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQT Sbjct: 1321 PREAVAEGVTLYTPDKIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQT 1380 Query: 1381 REIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMK 1440 R IRPGQE+AEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMK Sbjct: 1381 RVIRPGQERAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMK 1440 Query: 1441 QHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAV 1500 QHVQVYTDNRQGWTDAINNAVQKGTAHDV EPKPDREVMNA+RLFSTARELRDVAAGRAV Sbjct: 1441 QHVQVYTDNRQGWTDAINNAVQKGTAHDVLEPKPDREVMNAQRLFSTARELRDVAAGRAV 1500 Query: 1501 LRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGE 1560 LRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGE Sbjct: 1501 LRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGE 1560 Query: 1561 GRVKGSGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPGAIT 1620 GRVKGSGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPGAIT Sbjct: 1561 GRVKGSGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPGAIT 1620 Query: 1621 GGRVWGDIPDNSVQPGAGNGEPVTAEVLAQRQAEEAIRRETERRADEIVRKMAENKPDLP 1680 GGRVWGDIPD+SVQPGAGNGEPVTAEVLAQRQAEEAIRRETERRADEIVRKMAENKPDLP Sbjct: 1621 GGRVWGDIPDSSVQPGAGNGEPVTAEVLAQRQAEEAIRRETERRADEIVRKMAENKPDLP 1680 Query: 1681 DGKTEQAVREIAGQERDRAAITEREAALPEGVLREPQRVREAVREIARENLLQERLQQME 1740 DGKTEQAVREIAGQERDRA ITEREAALPE VLRE QR +EAVRE+ARENLLQERLQQ+E Sbjct: 1681 DGKTEQAVREIAGQERDRADITEREAALPESVLRESQREQEAVREVARENLLQERLQQIE 1740 Query: 1741 RDMVRDLQKEKTLGGD 1756 RDMVRDLQKEKTLGGD Sbjct: 1741 RDMVRDLQKEKTLGGD 1756 >UniRef50_D2U4N9 Conjugal transfer nickase/helicase (Fragment) n=1 Tax=Arsenophonus nasoniae RepID=D2U4N9_9ENTR Length = 1601 Score = 1178 bits (3047), Expect = 0.0, Method: Composition-based stats. Identities = 772/1629 (47%), Positives = 1087/1629 (66%), Gaps = 28/1629 (1%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRL 60 MMS +++SA AG+YYT KDNYYVL SM ER+ G+GAE LGL G DK+ F LLEG+L Sbjct: 1 MMSFNRIKSAQGAGDYYTQKDNYYVLESMEERYFGKGAEILGLTGEFDKNTFRELLEGKL 60 Query: 61 PDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEAL 120 PDG +L +DG N+HRPGYDLTFSAPKS+S+MA++ GDKRL++AHN+AV+ A+ Q E Sbjct: 61 PDGTELIFHKDGKNQHRPGYDLTFSAPKSISIMALVAGDKRLLEAHNKAVEVALSQAEKF 120 Query: 121 ASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDKV 180 AS R M++GQ +TVLT NL+ LFNHDTSRD +PQLHTH+VV N TQHN +W+ L+SD V Sbjct: 121 ASARTMSEGQKQTVLTDNLIAVLFNHDTSRDVDPQLHTHSVVINATQHNEKWQALASDTV 180 Query: 181 GKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVEAFSGRSQT 240 GKTGF E + AN+IA G++YR L+EQ E+LGYETE+VGKHG+WE+ VP E FS R+ Sbjct: 181 GKTGFSEMILANKIALGQIYRHALREQTESLGYETEIVGKHGLWELKNVPTEVFSKRTLA 240 Query: 241 IREAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRAD 300 I AVG+DAS K+RD+A LDTR+ K DP+ +W L TGFD Y+ A+ Sbjct: 241 IDNAVGKDASPKARDIATLDTRQKKTQQDPQQLRQQWQAELHSTGFDAEKYQAQAEINRL 300 Query: 301 LRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAG 360 + + ++ A++QAI+ LS+R+ QFTY+ +LA+ + LP + GVIE+ARAG Sbjct: 301 QAQNPTTSSIIEPEQIETAISQAISQLSDRQTQFTYSQLLAKAINQLPAQPGVIEQARAG 360 Query: 361 IDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYS 420 ID+AI +EQLIPLD+EKGLFTS I +LDELS++ + K + P S Sbjct: 361 IDQAIEKEQLIPLDKEKGLFTSDIQLLDELSLKQRIKQHQKITHGVSP--QVTPINQNTS 418 Query: 421 DAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDE 480 A P++A++SG GGA+ +R+RVAELV + + GR+ ++A D++S+ + + Sbjct: 419 PAARQWLFANPNIAVMSGIGGASIRRDRVAELVTLTNQTGRQAVVLAPDQKSRQYLME-- 476 Query: 481 RLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR 540 L + R+ + + AF+P ST+IV EKL+LKE ++L D A R N+Q+++ D+ QR Sbjct: 477 TLPESQVVNRQAINQETAFSPNSTLIVQDAEKLTLKEMVSLTDKAIRENLQLVLMDNQQR 536 Query: 541 TGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQ 600 GTG+AL ++ +R+ G + I+SEPD+ R +LA D+ ++ G +SVAQ Sbjct: 537 KGTGNALSILRQETAV-FRYSGIKPVQTAIVSEPDKTARLKKLAKDYTRTLAQGIDSVAQ 595 Query: 601 VSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWN 660 ++G REQ LT IR LKTQG+LG E+++T L P WL ++SR RD YR G VME W+ Sbjct: 596 ITGNREQKNLTGYIREALKTQGLLGKNEMSITTLKPQWLTAKSRISRDSYREGWVMEYWD 655 Query: 661 PETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRV 720 E +S +R++IDRVTA S++LTL + GE ++ +I+ L+S WSL++P K+ +++GERLR+ Sbjct: 656 SEKKSKERFIIDRVTAVSNTLTLINQHGEQRLEKITQLNSHWSLYQPAKIAISEGERLRL 715 Query: 721 TGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGH 780 + ++ GDRLQ E MT+ + T+ ++ F+ALK+E +V+ G Sbjct: 716 LAREGKGKLKTGDRLQATRHKEGEMTLTHDNTQKTLTVKANNDVFSALKIEQDYVQPLGG 775 Query: 781 SVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQI 840 S+SD A VFA+VTQ ++ TLN LARSG + LYS+LD +TA+KLA++P + EQ+ Sbjct: 776 SISDKARVFAAVTQRDLNQETLNQLARSGEKLVLYSALDVQKTAQKLAKNPHYQTTIEQV 835 Query: 841 KTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTG 900 +GE +L+ AI QKS L TPAQQAI LA+P +E K + F+ LL A + + Sbjct: 836 NALSGEQNLDKAIEKQKSRLFTPAQQAISLAMPQLEQKNITFTQAQLLATAMNAGEKPLS 895 Query: 901 FTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMER 960 + EI+AQIK L+ + V +G+GT LL+++AS+E EK I++HI EGK A+ PLM Sbjct: 896 QQTIEQEIDAQIKNNRLIEMPVVEGFGTNLLINQASFETEKQIIQHIAEGKSALSPLMSA 955 Query: 961 VPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRV 1020 VP ++ LT GQ+ AT++ILET DRF +QGYAGVGKTTQF+AV+SA++ LP+ ++P++ Sbjct: 956 VPDSVLNGLTPGQKEATKLILETPDRFIAIQGYAGVGKTTQFKAVLSAIDTLPKDKQPQI 1015 Query: 1021 VGLGPTHRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDM 1080 +GL PTHRAV EM++AGVDA+TLA+FL++ + GE PD+ NTLF++DE++M+GNTDM Sbjct: 1016 IGLAPTHRAVSEMQTAGVDAKTLAAFLYEESQKITQGEKPDYQNTLFVIDEAAMIGNTDM 1075 Query: 1081 ARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAV 1140 A+AY LIAAG GRAV SGD+ QLQ I+PGQPFRLQQ RSA D +MKEIVRQTP+L+ A+ Sbjct: 1076 AKAYHLIAAGNGRAVMSGDSAQLQPISPGQPFRLQQQRSAIDNVVMKEIVRQTPQLKPAI 1135 Query: 1141 YSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEA 1200 +I +++ A+ + + P VPR+E AW P+ S+ E Sbjct: 1136 VQMIAGNIKEAIHTVNQLSPDIVPRKENAWIPDKSIVEMK-------------------- 1175 Query: 1201 FPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVM 1260 D P L++AIV D+ GRT EA+E+TLI+T LN DRR +N++IH ++K GEL +V Sbjct: 1176 --DNPDNLHQAIVADFIGRTKEAQEKTLIITPLNADRRAINALIHQEKQKGGELQGNEVT 1233 Query: 1261 VPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLIS 1320 +P+L NI DG+LR ++TW TH+ AL L +N Y +I I + +TL++ +G L+S Sbjct: 1234 LPILVNTNIPDGQLRNINTWATHQQALALKNNQYWQITEIDIKNDTVTLRNEQGQESLLS 1293 Query: 1321 PREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQT 1380 PR+AV EG+TLY +T+ V GD++RFTKSD E+G++ANSVW + A ++TL++G++T Sbjct: 1294 PRQAVKEGITLYQAETLTVSQGDKIRFTKSDNEQGFLANSVWQIQAADEKTITLTNGKKT 1353 Query: 1381 REIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMK 1440 R + P ++ HIDLAYAIT H +QGASE FAI L T+G K +AYVALSR K Sbjct: 1354 RTLTPTTDKQHAHIDLAYAITTHASQGASEQFAITLAKTQGKNKAATHPAAAYVALSRAK 1413 Query: 1441 QHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAV 1500 HVQVYTDN WT + QK TAHDV E K NA+ LF + L A GRA Sbjct: 1414 AHVQVYTDNIDDWTALLEKPSQKATAHDVVEQKDITARENAKALFKQGQPLETTAQGRAA 1473 Query: 1501 LRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGE 1560 LR + L+ G+S +++ G+KYPQ Y+ P FD+NGK AG+W+ L ++ G Sbjct: 1474 LRASHLS-GESMGKWLRMGKKYPQNYLGFPIFDQNGKQAGVWMTRLNNNNPQKPIGNHTI 1532 Query: 1561 GRVKGSGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPGAIT 1620 G+ GS +A+F+A Q S+NG++ LA+ + + V IA ++P G++VR+ G P NP AIT Sbjct: 1533 GKRIGSQEARFLAFQRSQNGKTALANTLTEAVEIANNHPQHGIIVRLEGNDMPHNPKAIT 1592 Query: 1621 GGRVWGDIP 1629 GG+ W + P Sbjct: 1593 GGQQWVNQP 1601 >UniRef50_D1S139 Protein TraI n=1 Tax=Serratia odorifera 4Rx13 RepID=D1S139_SEROD Length = 1761 Score = 1083 bits (2800), Expect = 0.0, Method: Composition-based stats. Identities = 657/1794 (36%), Positives = 1000/1794 (55%), Gaps = 74/1794 (4%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRL 60 MMS+A V SA +A NYY+++DNYY LGS+ +W G GA++LGL GSV++ FT +L G+L Sbjct: 1 MMSVAPVASAANAANYYSNQDNYYFLGSLQSQWLGEGAKELGLTGSVEQQAFTDVLFGKL 60 Query: 61 PDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEAL 120 P+G L + + + HRPG+DLTFSAPKSVS+M ++GGDK L+ AHN+AV A Q++ L Sbjct: 61 PNGVQLGKEVNNQHVHRPGHDLTFSAPKSVSLMILIGGDKELLQAHNEAVKVAAEQIQNL 120 Query: 121 ASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDKV 180 S R DG + V TG LV A + HDTSR+ +PQ+HTH +VANVT+ +G+WK L++D + Sbjct: 121 VSARDTKDGVTSIVPTGKLVAAAYTHDTSRNLDPQVHTHLIVANVTELDGKWKALATDYI 180 Query: 181 GKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPV---EAFSGR 237 K GFIE V A+Q+ G+LYR LKE+VE LG+ETE+VGKHG+WE+ GVP + FS R Sbjct: 181 HKAGFIETVMAHQVTLGKLYRNALKEKVEKLGHETEIVGKHGLWEIKGVPEPVRDEFSSR 240 Query: 238 SQTIREAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQ 297 + I AVG DA+L+SRDVAA DTR +K + W +K+ GFDI+ Y+ + Sbjct: 241 GKEIETAVGVDATLRSRDVAAKDTRAAKVDPSKMRLLERWQNQMKDMGFDIQDYKKSLK- 299 Query: 298 RADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERA 357 + + D QQAV A++ LS+ K +FTY+DVL +G + + Sbjct: 300 ---PVDTPDRSSVEPDIDAQQAVRDAVSLLSDNKTRFTYSDVLLTALGSSENQIKTAD-I 355 Query: 358 RAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTA 417 RA ID A+ +IPLD+EKG+F S +H+LDELS++ L++D++K ++V ++ P A Sbjct: 356 RAAIDGAMQDNLIIPLDKEKGVFASRLHLLDELSIQGLAQDMVKNSQVVAFKDRQTPLPA 415 Query: 418 GYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMK 477 + + LA++S GGAA RE +A L +++ GR V ++A+ ++K Sbjct: 416 ELAPIATE------QLALLSSIGGAAQHRELIAGLATASKDAGRSVMVLASSAEKSASLK 469 Query: 478 QDERLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDS 537 + E L G + L + TVIV+ E+LSLKETL L+ A + QV+ D Sbjct: 470 KSEDLQGIVQNKFSILQPDFSMKAHGTVIVESAEQLSLKETLVLIGHAREKDAQVIFVDG 529 Query: 538 GQRTGTGSALMAMKDAGVNTYRWQG-GEQRPATIISEPDRNVRYARLAGDFAASVKAGEE 596 R +A+ ++ AGV + A +IS D+ RY LA +A E Sbjct: 530 AGRKHISNAMAVLESAGVTRHALNTPSPGLQAEVISISDKQERYRALADRYAELSGGTEP 589 Query: 597 SVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVM 656 A V G+REQ L AIR L+ G L V + A SPV+LD++SR + YR G V+ Sbjct: 590 VTAAVVGMREQRNLNAAIREALQDAGKLDRGGVVIEARSPVFLDTKSRKQPENYRAGYVL 649 Query: 657 EQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGE 716 E + + D Y IDRV ++ L+L D+ G + V+I +DS W LF ++ VA+GE Sbjct: 650 E-HRKDAKHTDHYRIDRVHRETRMLSLIDSDGVLRNVKIRDMDSDWRLFESREIAVANGE 708 Query: 717 RLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVE 776 +L + + DRL V +SE +T + + LP+ + +++G+ Sbjct: 709 KLLAIAGDKEIGLKAKDRLTVTQISEKGITAQLGDGKKSVLLPLERPLY----IQHGYAG 764 Query: 777 TPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVV 836 PG SV+D+ V A++ + T+N LA+SG +++ + + +KLAR Sbjct: 765 APGASVNDNGHVLAALNSRELSGNTVNALAQSGTRAEIFTGEVQDKAEDKLARMSQVNTP 824 Query: 837 SEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAA 896 ++ AG++ L A+ + + Q+A+ + S +AF+ + LL A Sbjct: 825 LTHVQHMAGKSELPEALQKLNADVWGDVQKAVTYGIEQSMSHSIAFTPMTLLDNAM---G 881 Query: 897 EGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMP 956 + + EI+ + K G+L+ V V G V+R++YE EK+I+R + +GK P Sbjct: 882 QLNNHQAIAAEIDRREKSGELINVVV---QGKNQYVARSAYEMEKTIVRIVEQGKGTQEP 938 Query: 957 LMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESE 1016 L+E+V ++ LT GQ TRM+L T D+F +VQG AGVGKTTQ A A+ L Sbjct: 939 LLEQVDPTVLAGLTPGQNQTTRMLLGTKDQFILVQGSAGVGKTTQLTAFQGALQTLAPEN 998 Query: 1017 RPRVVGLGPTHRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVG 1076 RP++VGL PTH+AV EMR+ G++AQT SF+ + + +GET ++ N +F++DESSMVG Sbjct: 999 RPKIVGLAPTHQAVKEMRAVGIEAQTTKSFIVEHDKRVAAGETINYENVVFVIDESSMVG 1058 Query: 1077 NTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQ-TPE 1135 N D A AY IA G GR ++ GD +QL ++ G PF+L Q RS DVAIMK+IVRQ P Sbjct: 1059 NQDTAEAYQAIAQGSGRGISVGDREQLLSVDSGAPFQLLQERSPIDVAIMKDIVRQDAPA 1118 Query: 1136 LREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAM 1195 L+ AVY ++ V+ ++ +++V PS VPR A+ P S+ + +A L +K M Sbjct: 1119 LKAAVYDILENKVDASIEKIKTVSPSVVPRLPDAFVPAGSIEDLKAESDA-LKANIEKGM 1177 Query: 1196 LKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELG 1255 E P+ I+ DYTGRT RE+TLI+TH N DRR +N IHD +K G LG Sbjct: 1178 KIDEDKPEPTA--VSRIIADYTGRTAATREKTLIITHTNSDRRSVNEGIHDTLKKKGVLG 1235 Query: 1256 KEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGN 1315 ++Q+ +PVL N L ++ ++ + +L + Y + + K GL+ +D G Sbjct: 1236 EKQITIPVLTRVNDDRRALNQVDKFKAGQV--ILEGDRYLDVINVDKSSGLVWTRDENGR 1293 Query: 1316 TRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAV-SGDSVTL 1374 L+SP E + + ++ ++I V GD++RF+KS++ G +AN +TV+ V VTL Sbjct: 1294 QHLLSPFENSSRDIAIFNRESIAVAVGDKVRFSKSNKNDGQLANETYTVSGVKDDGQVTL 1353 Query: 1375 SDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYV 1434 S T+ I P ++H+D AYA+T +GAQG S + I LEG EG R ++A S Y+ Sbjct: 1354 SGNAGTKTIHPRDRNTDRHVDYAYAVTGYGAQGTSMPYVITLEGAEGARGMLATMRSFYI 1413 Query: 1435 ALSRMKQHVQVYTDNRQGWTDAINNAVQK-GTAHDVFEPKPDREVMNAERLFSTARELRD 1493 ++SR K HVQ+Y+DN W I V++ TAHDV +P+ R A ++S L Sbjct: 1414 SISRAKSHVQIYSDNLDKWIGKIKKPVEELLTAHDVLKPETQR--HQARTIWSMGVPLNK 1471 Query: 1494 VAAGRAVLRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNG 1553 A GRA +Q G AR I RKYP+P++A P FD NGK+AGI L PL Sbjct: 1472 TAIGRAWQKQDGQVNSGLAARVIPQTRKYPEPHLAFPVFDGNGKAAGISLTPLHVSQQGK 1531 Query: 1554 LRGFSGEGRVKGSGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRP 1613 + +G R+ + +AQ ++ SRNG++LLA + ++ IARD+ SG+V +I + Sbjct: 1532 IE--TGTPRLMATDNAQAALIRKSRNGQTLLATSFEEARAIARDDKQSGIVWQIGDKLPS 1589 Query: 1614 WNPGAITGGRVWGDIP---------DNSVQPGAGNGEPVTAEVL-------AQRQAEEAI 1657 N ++T G + +I + +QP + P+ A AQ+ A E Sbjct: 1590 ENMVSLTKGTLKQNIETLHHLAATIADQLQPNSPTTSPMPAPAATHDLDPRAQQLALEQA 1649 Query: 1658 RR--ETERRADEIVRKMAENKPDLPDGKTEQAVREIAGQ---ERDRAAITER-------E 1705 R+ + ++ +E+ +++ KP +P + E+ + ++A + E++ AA R + Sbjct: 1650 RQLADAHQKQEELAKQV---KPVIPQPRPEEKLPDLAHEKLMEQNAAASVSRKERSKGTD 1706 Query: 1706 AALPEGVLREPQRVREAVREIA--RENLLQERLQQMER---DMVRDLQKEKTLG 1754 ++ V R Q+ ++ ++ + QER ++ R DM R Q+EKT G Sbjct: 1707 ISIDSAVTRVHQQEKDRSEQVREINVSRTQERDRERVRDEPDMQRQHQQEKTRG 1760 >UniRef50_B6ICH5 TraI protein n=1 Tax=Escherichia coli SE11 RepID=B6ICH5_ECOSE Length = 1738 Score = 1070 bits (2767), Expect = 0.0, Method: Composition-based stats. Identities = 758/1788 (42%), Positives = 1073/1788 (60%), Gaps = 85/1788 (4%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRL 60 M+SIA + AG YYT +DNYY LGSM RW G GA+ L L+G VD L+ GRL Sbjct: 1 MLSIAPI--AGGGAGYYTSQDNYYFLGSMQSRWLGEGAKSLQLEGPVDAFRLDELIAGRL 58 Query: 61 PDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEAL 120 P+G L RM+ G N HR GYDLTFSAPKSVS++ L G+ RL++A N+AV +++VE+L Sbjct: 59 PNGVSLERMEGGINVHRSGYDLTFSAPKSVSVLIALYGENRLLEAWNRAVSETLKEVESL 118 Query: 121 ASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDKV 180 S+RVM +G++ET LT V+A FNHDTSR+ +PQLHTHA+ N+T W+TL+S V Sbjct: 119 VSSRVMKEGETETQLTQKAVIATFNHDTSRNLDPQLHTHALFLNMTPTESGWRTLASGTV 178 Query: 181 GKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVEAFSGRSQT 240 K GFIE VYANQ+A G++ L+ QVEA+GYET GK+G+WE+ GVPV+ FS RSQ Sbjct: 179 RKDGFIEAVYANQLALGQIQLNLLRRQVEAMGYETVDTGKNGLWEIKGVPVDIFSTRSQQ 238 Query: 241 IREAVGEDASLKSRDVAALDTRKS-KQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRA 299 IREAVG+DAS+KSR VAALDTR++ ++ D E + EW + + TGF RA R+ A +R Sbjct: 239 IREAVGDDASVKSRSVAALDTRRAKQKEPDREELLTEWHERIDRTGFSYRALREKAAERE 298 Query: 300 DLRTLTPGPASQDGPDV------------------------------QQAVTQAIAGLSE 329 L+ T + + + + AV+QAI+ LS+ Sbjct: 299 ALQQSTRSVSEPEKAVLSGEAGGYSQREKSSSSTSGQREGVPVPSVMRDAVSQAISLLSD 358 Query: 330 RKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDE 389 R+ QFTY+DVL+RT+ ++ E G I ARAGI++AIS +L+PLD+EKGLFTS IH+LDE Sbjct: 359 RRAQFTYSDVLSRTLALVEAEPGSIALARAGIEQAISSGELVPLDKEKGLFTSSIHLLDE 418 Query: 390 LSVRALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERV 449 LSV+ L++ M++N+V V +P A +VLA P++AI+S G QRE++ Sbjct: 419 LSVQQLAQQAMRENQVMVTMRPEMPL----QGAAAVLADTLPAVAIISTGRGMTTQREQI 474 Query: 450 AELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGSTVIVDQ 509 +V MA QGR+VQ++A DR+ + + + LSG++ + LL G ST+++ Sbjct: 475 QAVVAMAEGQGRQVQVMAPDRKMTAFLAEQQGLSGKV--SGKNLLTGEGLKHDSTLVIAG 532 Query: 510 GEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMKDAGVNTYRWQGGEQRPAT 569 EKLS+KET+TLLD A R+NVQV++ D G R GTG+AL ++DAGV + + Sbjct: 533 AEKLSVKETVTLLDQALRNNVQVVLMDGGGRQGTGNALATLEDAGVVRLQGGTDRGVRVS 592 Query: 570 IISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEV 629 ++S DR RY +LA D+A GE VAQ G REQ LT+AIR LK G LG +V Sbjct: 593 VVSHGDRRQRYEQLALDYAVLHTQGESVVAQAPG-REQRALTEAIRKSLKATGELGDRDV 651 Query: 630 TMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGE 689 T++ L+PV+LDS++R L D YR G ++E+++ E R+ +RY IDRVTA+S +LTL D +G Sbjct: 652 TISTLTPVFLDSKNRRLTDSYREGQILERYDAERRTSERYTIDRVTARSRTLTLTDEKGR 711 Query: 690 TQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVV 749 +Q++++ +DSSW L++P +PVA+GE+L + G ++ GD + V +++ +TV Sbjct: 712 SQLIKVRDMDSSWRLYQPGMLPVAEGEKLMLLGSHG--KLRSGDSVTVEHITDRTLTVRQ 769 Query: 750 PGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSG 809 R LK+ G+V TPG +VS+ V A+V+ TLN LA SG Sbjct: 770 GERRH------RLPVADGLKISQGYVTTPGKTVSEQGVVLAAVSARDTQAQTLNTLATSG 823 Query: 810 RDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIH 869 V++Y+SL E +LAR P + EQ+ L+TA+ + +L ++A+ Sbjct: 824 DRVQIYTSLSEEDAHARLARSPLYRQAREQVSP--EGKPLDTAMQQARDSLMPVTEKAVR 881 Query: 870 LALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTG 929 A+ + + + FS D++ EA + ++RG++L V Sbjct: 882 QAITLAQGSSVVFSRQDVVLEALKAHP-SVTPYGIHHTFAELVQRGEILSVPGD--GSAS 938 Query: 930 LLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTV 989 VS ++ EK+ILR + EGK PLME V L+ LTSGQ+ A+R+ILE++DRF Sbjct: 939 RYVSAETWLQEKAILRTMAEGKSTQRPLMETVDLSLLTGLTSGQQTASRLILESTDRFVA 998 Query: 990 VQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVDAQTLASFLHD 1049 +QGYAGVGKTTQFR+V++A+ LPE++RP VVGL PTHRAV EM+ GV AQT+ASFL D Sbjct: 999 IQGYAGVGKTTQFRSVLAALETLPEADRPVVVGLAPTHRAVSEMQGVGVKAQTIASFLMD 1058 Query: 1050 TQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPG 1109 T+ +Q+SGE +FS TLFL+DESSMVGN DMA A IAA GGRAV SGD+ QLQ +A G Sbjct: 1059 TERRQQSGEQLNFSKTLFLIDESSMVGNRDMADTLARIAAAGGRAVLSGDSLQLQPVASG 1118 Query: 1110 QPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGA 1169 PF L Q RSA DVA+MK+IVRQ+PELR AVY+L+ AL + V P QVPR GA Sbjct: 1119 APFTLMQQRSAIDVAVMKDIVRQSPELRPAVYALLEGRTGEALDTIRRVSPEQVPRDNGA 1178 Query: 1170 WAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLI 1229 + P SVTE ++E + + AIV DYTGRT EAR QTLI Sbjct: 1179 YVPASSVTEIRQTREQR---------------ETQGDRVISAIVDDYTGRTAEARRQTLI 1223 Query: 1230 VTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVL 1289 VT N D +N+ IHD +AG+ G ++ V VL + L+ ++ H + L Sbjct: 1224 VTQTNADAMAINAGIHDRLHEAGKTGGYELPVTVLVREKTQTEALKSVAGLAQHSGHIAL 1283 Query: 1290 VDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTK 1349 ++ Y+ I +G++ L+DAEG L+S E+ + +++ IR+ GD +RFT+ Sbjct: 1284 INQQYYTIHSPDAANGVVMLRDAEGRDHLLSAFESSLRDIAVFSRREIRLSEGDLVRFTR 1343 Query: 1350 SDRERGYVANSVWTVTAVSGDS-VTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGA 1408 DRE+G +W V V+ + +TL G+ TR I+PG+E ++ H+D YA TAH AQGA Sbjct: 1344 QDREQGRDTQVLWEVIRVADNGDITLKHGEHTRLIQPGREMSDMHLDYGYAGTAHRAQGA 1403 Query: 1409 SETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHD 1468 SE F IAL G G R+ +A AYVALSRMKQHVQVYTD+ W ++ + + TAHD Sbjct: 1404 SEAFVIALAGATGARQRLASLSDAYVALSRMKQHVQVYTDDIGKWQASVAASKSRETAHD 1463 Query: 1469 VFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPARFIAPGRKYPQPYVA 1528 V + + D A+ L+ +AR L A GRA+LR+ GL S ARFI+ RKYP P+VA Sbjct: 1464 VLDVQQDFRATTAQNLWDSARTLNQNALGRALLRETGLP-DHSEARFISGSRKYPAPHVA 1522 Query: 1529 LPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGEGRVKGSGDAQFVALQGSRNGESLLADNM 1588 PA+DRNG+ GIWL + D+ ++G +GR G DA V LQ S NG +L A + Sbjct: 1523 WPAYDRNGRQQGIWLQEIRMDEEGRMQGLDEQGRWLGRDDAGVVVLQQSHNGVTLTASDP 1582 Query: 1589 QDGVRIARDNPDSGVVVRIAGEGRP-WNPGAITGGRVWGDIPDNSVQPGAGNGEPVTAEV 1647 + +AR +P+SGVV++ P W +T G+ G+ +++ + AE+ Sbjct: 1583 ASALALARQHPESGVVLQQDTAPLPGWLLQKLTQGQ--GETTPEAIKT-VQTAQNTDAEL 1639 Query: 1648 LAQRQAEEAIRRETERRADEIVRKMAENKPDLPDGKTEQAVREIAGQERDRAAITEREAA 1707 L+ + +EE R+E E+ E +++ + +T QA + ++ RAA +AA Sbjct: 1640 LSLQTSEERARQEAEKAVRETLQQDETRNILPAESETLQAAENVVAEQEIRAA---GQAA 1696 Query: 1708 LPEGVLREPQRVREAVREIARENLL--QERLQQMERDMVRDLQKEKTL 1753 E E + + E+A + QE+L+QME+++V D +EKTL Sbjct: 1697 ARE----EKENAQLLQHEVAALKHINGQEQLRQMEKELVID--REKTL 1738 >UniRef50_B2VB36 TraI protein n=1 Tax=Erwinia tasmaniensis RepID=B2VB36_ERWT9 Length = 1979 Score = 869 bits (2245), Expect = 0.0, Method: Composition-based stats. Identities = 490/1809 (27%), Positives = 792/1809 (43%), Gaps = 150/1809 (8%) Query: 2 MSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRLP 61 MS+ + S+ A YY+ DNYY +G + W G+ AE++GL GSVD F LL+G P Sbjct: 1 MSVQTLSSSSGAAGYYSQADNYYFVGELLTGWHGKLAEEMGLSGSVDLKTFASLLDGITP 60 Query: 62 DGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEALA 121 DG + + HRPG DLTFSAPKS+S++A++GGD+RLI A ++V + ++E+ Sbjct: 61 DGRKMGK------NHRPGLDLTFSAPKSLSVLALVGGDERLIQAFQESVRDTITEIESFI 114 Query: 122 STRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDKVG 181 STRV D Q+ TG + A F HDTSR+ +PQLH H + N+T+ NG+ +LSSD Sbjct: 115 STRVTKDKQTSIETTGKGIFATFVHDTSRNLDPQLHMHVLTMNITEKNGKLYSLSSDNRY 174 Query: 182 KTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVE---AFSGRS 238 GF+E VY + FG + R L+++V LGY+T K G+WE+ GVPV FS RS Sbjct: 175 GNGFMEMVYTHHTLFGTIQRNILEKKVTTLGYQTRPTEK-GLWEIQGVPVSLLGHFSSRS 233 Query: 239 QTIREAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQR 298 + IR AVG+ AS SR +AALDTR KQ D + EW +++ GFD+ + A ++ Sbjct: 234 RDIRRAVGDSASFSSRSIAALDTRSPKQVPDRSELLNEWNAAIRDHGFDMGEFISTAREQ 293 Query: 299 A-----------------------------DLRTLTPGPASQDGPDVQQAVTQA------ 323 A P P + Q+ T Sbjct: 294 AQDGPALGHDDARPADAEQEQEQEQEQEQGGDTPSNPAPQQDEAAARQKQATPGTPAVRP 353 Query: 324 --IAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFT 381 L++R+ Q + + D+ + L L K F+ Sbjct: 354 EDTTQLAQREHQAEKQPHMQTVSQKEKKPDAPPRNLEQ--DDRVIHTALSSLSNRKRDFS 411 Query: 382 SGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQD------------ 429 VL+ + + + ++ + AQ Sbjct: 412 YTDVVLEIAASTENVVSLRYGEHLIDRAIETGKLIPLNDEKTRFTAQTLLIDEKVVVELA 471 Query: 430 ------------------------RPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQI 465 + I + G + + +++ ++GR V + Sbjct: 472 RDHVANGLVSGTKKPLENLLPELADRPVTIFTAPSTVRGVKAVIDKVISDQEDRGRSVTV 531 Query: 466 IAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGA 525 ++ + + R F STVIVD E++S ++++ LL A Sbjct: 532 LSPTASRRDQIAFATEEKMIF---RDLSEPETTFARNSTVIVDNAERMSARDSINLLSHA 588 Query: 526 ARHNVQVLITDSGQRTGTGSALMAMKDAGVNTYRWQGGEQRPAT-IISEPDRNVRYARLA 584 +N+Q+++ ++ R+ + L +D G +T + + + + + PD+ R +A Sbjct: 589 RENNLQLVLINTAGRSSQTNVLSLFEDGGASTGKVKTEHESLSVKVSHAPDKAQRGKDVA 648 Query: 585 GDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGL--PEVTMTALSPVWLDSR 642 ++AA+ V +++ +T IR+ LK G + V + A + V++ Sbjct: 649 SEYAAAFADTVRPVVVAPTAQDRRQITDDIRASLKESGGIDGLAQGVMVEARNEVFMTIA 708 Query: 643 SRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLD-SS 701 + +R G V+E R Y + + ++ SL L + +GE V+ S++ Sbjct: 709 EKKKVASWRTGYVIEDRTE--RKPQVYTVGSIAEETKSLILYNDKGERSTVKASAMGRKD 766 Query: 702 WSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVS 761 +F + V GE L+ + + + D L+V S +T + TL Sbjct: 767 VRVFESTMIEVVPGEVLKASAALKNQGIRAKDSLRVHEASGREITGFNERTGKEFTLYTQ 826 Query: 762 DSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDET 821 + + G+V G TV A++++ ++ +N L SG + +YS LDE Sbjct: 827 EPVYA----AYGYVSGMGEVNRAEGTVIAALSKRDLNANNINSLNMSGSSLSIYSPLDEK 882 Query: 822 RTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLA 881 T K+ V+E + + A + ++ A ++ K + TP A++ A+ ++++ Sbjct: 883 ATVSKIQNMNLRNTVTEYVISTAQKPDIDAATTYLKEHVATPMAIAVNRAIA--GVQEVS 940 Query: 882 FSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTG-LLVSRASYEAE 940 LL+ A E+ EI+++I GDL+ ++ +V RA+YE E Sbjct: 941 VYATTLLSSALKL-DRRLTAAEVRNEIDSRIATGDLISLNGGTTTTDNPRVVPRATYEVE 999 Query: 941 KSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTT 1000 K IL + G PL+ RV ++ LT+GQ+ AT IL +D F VQG+AGVGKTT Sbjct: 1000 KDILGMVTAGYATKQPLVIRVEEGKLDHLTAGQKGATGDILTGTDTFQFVQGFAGVGKTT 1059 Query: 1001 QFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETP 1060 + + S +N L + G+GPTHRAVGEM AG+ AQT SF+ D+ + +G Sbjct: 1060 KLTTLQSVLNELLP--GLEIRGIGPTHRAVGEMSGAGIHAQTAKSFVLDSLKDEANGVKQ 1117 Query: 1061 DFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSA 1120 D NTLF++DE+SMVGN+DM LI GGRAV GD Q I G PF+L Q R+ Sbjct: 1118 DHRNTLFIVDEASMVGNSDMRDTLGLIDRAGGRAVVIGDRQQFLPIESGAPFQLAQERTP 1177 Query: 1121 ADVAIMKEIVRQTP-ELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEF 1179 A +++M++IVRQT LREAVYS IN D +L LE++ VPR+E Sbjct: 1178 ARLSVMQDIVRQTNLALREAVYSTINGDHSGSLRQLEAISNDLVPRRE------------ 1225 Query: 1180 SHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRV 1239 + + + + A + + DY RT EAR T+++T N+ RR Sbjct: 1226 VYRENPRFSGASLQGNASSST-----------VAEDYLSRTDEARAGTMVITGTNKIRRE 1274 Query: 1240 LNSMIHDVREKAGEL-GKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIA 1298 +N +I + G L V V V + + +W R V++++ + Sbjct: 1275 INDLIQQGLVQDGSLSAARHVDVSVYSQILLPSTAFHDPDSWIRGR---VVINDSAYFRV 1331 Query: 1299 GISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVA 1358 ++G+ G + R + + ++ + R GDR+ K+D + G + Sbjct: 1332 EKVGNEGVTVRHMDSGLHQEWDYRGLDSTRMEMFDVEQTRFLEGDRVLLRKTDIDTGKTS 1391 Query: 1359 NSVWTVTAVSGD-SVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALE 1417 N + + A+ + + L R+I P ++HIDL YA+T+ GAQGAS + I Sbjct: 1392 NEAYRIQAIRDNGQIVLEGKSGVRQIDPALTAQDRHIDLGYAVTSTGAQGASARYDIGFM 1451 Query: 1418 GTEGNRKLMAGFESAYVALSRMKQHVQVYTDN-RQGWTDAIN-NAVQKGTAHDVFEPKPD 1475 GTEG + + Y+ +SR K+H Q+YTDN AI N K TAHD+ + D Sbjct: 1452 GTEGAESRLTNARAYYILISRAKEHAQIYTDNTPAKLEAAIGINREPKHTAHDLLHARKD 1511 Query: 1476 REVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDRN 1535 +A+ L A L AGR + L G S + ++ P V LPA+D N Sbjct: 1512 --ASHAQTLSQFAASLDTFYAGRVLAESFSLDIGTSALKLLSRTPTAPL-RVMLPAYDYN 1568 Query: 1536 GKSAGIWLNPLTTDDGNGLRGFSGEGRVKGSGDAQFVALQGSRNGESLLADNMQDGVRIA 1595 GK +G+ L G GE + + + F +Q E L A + D + +A Sbjct: 1569 GKVSGVNTWALAAARGEFSL---GEQQTQTESNTLFSVVQRGNTPEVLSAGTLSDALTLA 1625 Query: 1596 RDNPDSGVVVRIAGEGRPW------NPGAITGGRVWGDIPDNSVQPGAGNGEPVTAEVLA 1649 NP + V++ G + N IT + ++ + + A Sbjct: 1626 GKNPQASVILAPEGYEQHSVVLDVLNVDRITS-TMIDEVTRFTEETPEQTVNADDLPEPA 1684 Query: 1650 QRQAEEAIRRETERRADEIVRKMAENKPDLPDGKTEQAVREIAGQERDRAAITERE-AAL 1708 Q A+ E + + + PD D E+ ++ + I + L Sbjct: 1685 QITADTTYDMPAENDT-NNGQAIDTDMPDYGDMNGYDDAPEMDTDWQEYSDIMDDSTPEL 1743 Query: 1709 PEGVLREPQ 1717 P+ L EPQ Sbjct: 1744 PDTDLPEPQ 1752 >UniRef50_A9L6G5 Conjugative transfer relaxase protein TraI n=7 Tax=Gammaproteobacteria RepID=A9L6G5_SHEB9 Length = 1986 Score = 843 bits (2177), Expect = 0.0, Method: Composition-based stats. Identities = 401/1644 (24%), Positives = 686/1644 (41%), Gaps = 136/1644 (8%) Query: 1 MMSIAQV-RSAGSAGNYYTDKD---------------------NYYVLG---SMGERWAG 35 M+SI+ + SAG A +YY ++ NYY+ +W G Sbjct: 1 MLSISPIASSAGGAASYYLSEEKNLNLPDVSLEKAADAKEGETNYYLKEQSAEPNTQWFG 60 Query: 36 RGAEQLGLQG-SVDKDVFTRLLEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMA 94 + AEQ G+ G V++ +L G L D ++ ++ R G+D TFSAPKSVS++A Sbjct: 61 KLAEQEGMLGKPVEEHQLKEVLAGSLND----QTLKTQNSNARNGFDFTFSAPKSVSLLA 116 Query: 95 MLGGDKRLIDAHNQAVDFAVRQVEALASTRVMTD---GQSETVLTGNLVMALFNHDTSRD 151 ++GGDKRL+ AH+ AV FA+ +E A+ T+ + TGNL+ A+ H TSR+ Sbjct: 117 LVGGDKRLMTAHDDAVKFALSHIEKDAAQARQTNPDTKATSFENTGNLLFAMVRHKTSRE 176 Query: 152 QEPQLHTHAVVANVTQH-NGEWKTLSSDKVGKTGFI----ENVYANQIAFGRLYREKLKE 206 ++PQLHTH++ AN+T+ G + L+S K G I E VY +Q + LY+ L Sbjct: 177 EDPQLHTHSLTANMTKDSEGTLRALASSFKQKGGIINGTGERVYNHQKYYTSLYQSALAR 236 Query: 207 QVEALGYETEVVGKHGMWEMPGVPV---EAFSGRSQTIREAVGEDA--SLKSRDVAALDT 261 VE GY+T +G + ++E+ GVP + FS RSQ I E S +RDVAA DT Sbjct: 237 SVEQAGYQTRSLGNN-LFEVEGVPQSLLDTFSTRSQQINEQTQSLGLDSQAARDVAAKDT 295 Query: 262 RKSKQHVDPEIKMAEWMQTLKETGFDIRAYR-DAADQRADLRTLTPGPASQDGPDVQQAV 320 RKSK + +W +GF++ ++ D+ + L L PA+ D AV Sbjct: 296 RKSKAYTSEATLFEQWKNKANNSGFNLTSFVTDSMSRETSLNALALKPAAID------AV 349 Query: 321 TQAIAGLSERKVQFTYTDVLART-VGILPPENGVIERARAGIDEAISREQLIPLDREKGL 379 ++AI S + +F Y ++ + + + +D+ I LIPLD+E Sbjct: 350 SRAIEHASNTQNRFNYAKLVESATLEFTRGQKLDALDIKLALDKHIEDGALIPLDKESAT 409 Query: 380 FTSGIHVLDELSVRALSRDIMKQNRVTVHP--EKSVPRTAGYSDAVSVLAQDRPSLAIVS 437 FTS H+ E ++ + R V + A VS L + +V+ Sbjct: 410 FTSAAHIKAETNLLESIKPKTANMRQVVDTNTLQGKGLNADNQKKVSELFASTKQVNLVN 469 Query: 438 GQGGAAGQRERVA-ELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELI--------- 487 G E++A L+ + G+ + II D +S++ + + + Sbjct: 470 VF----GSSEQLATALLNVGEANGKRIHIITPDMKSKLQTSERVQRDSSTVVKWIMNHFK 525 Query: 488 ----TGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSG---QR 540 + T ++V+ KL L + LL A N +V++ + Q Sbjct: 526 PDHTHTLSSFTKTANNTNRDILVVENANKLGLNDFNALLAQAKAGNSKVILLNHANAKQG 585 Query: 541 TGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRN-VRYARLAGDFAASVKAGEESVA 599 G+A+ +K VN W +Q + ++ R +A +A + Sbjct: 586 MKAGNAIEVLKKGNVNESNWVATKQSNTAMRLHESKDSDRVNLIAKTYAQLPEKQHTQ-V 644 Query: 600 QVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQW 659 ++ L AIR+EL+ QG + + + L+PV+L ++ R + Y GMV+ QW Sbjct: 645 IAGTHKDVKQLNSAIRAELQNQGDVSRLGLNIPTLNPVFLSAQQREVVGQYTKGMVLTQW 704 Query: 660 NP--ETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLF---RPEKMPVAD 714 + +D V +++LTL D G+ + SS + + +P+ + +A+ Sbjct: 705 QKVGGRNQQQQLTVDSVNRDNNTLTLIDKNGKASEINPSSKAFKAAEYVIAKPDNLHIAN 764 Query: 715 GERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGW 774 G++L + +S + ++S++ +T + + ++ S L +G+ Sbjct: 765 GDKLIMATNHQDSGLS-KQIYTINALSKEWVT-LKDESGKQHSVKAS--ALHHAPLNHGY 820 Query: 775 VETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFT 834 TP ++ +++ ++ + L+ G + + ++L + Sbjct: 821 ATTPSNASPNASHHIVNIKAYSASKEWLHDTLTQGIKHIDIFTDKAQQFDDRLEKSEVKP 880 Query: 835 VVSEQIKTRAGETSLETAIS----------------HQKSALHTPAQQAIHLALPVVESK 878 +I A + A+ A+ + K Sbjct: 881 SSISRIMQAADMPEKFVNSQTTALLTQDVTAALNAIGAQHQDKGLIHNAVDFAIQHISEK 940 Query: 879 KLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVD-------VAKGYGTGLL 931 + +S +L+ A +A E G + EI ++ D A+ + Sbjct: 941 EAGYSQKELIVNAIKYAFEEKGTSITQHEIINTLQHMATNSTDKGAPSLLSAEYHDGTRW 1000 Query: 932 VSRASYEAEKSILRHILEGKEAVMPLMERVPG----ELMEKLTSGQRAATRMILETSDRF 987 ++A+ + E IL + GK+ + PL + LT GQ+ AT +I T DRF Sbjct: 1001 TTQAAIDTEVRILDRLQAGKDQLAPLTSVEHATQVLSQNQSLTDGQKDATLLITTTKDRF 1060 Query: 988 TVVQGYAGVGKTTQFRAVMSAVNM-------LPESERPRVVGLGPTHRAVGEMRSAGVDA 1040 VQG AG GK+T + V P+ + +GL PTH AV E++ V++ Sbjct: 1061 VGVQGLAGTGKSTMLETGIDLVKQSESILNTQPDKTPTQFIGLAPTHAAVNELKDKNVES 1120 Query: 1041 QTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDT 1100 QT+ S L + Q + ++NT+FLLDESSM N M + LI G RAV GDT Sbjct: 1121 QTVQSLLSNFLSQ--DAKPDQYANTVFLLDESSMTSNAQMDKFTHLIETTGARAVFLGDT 1178 Query: 1101 DQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTP-ELREAVYSLINRDVERALSGLESVK 1159 QL + G+PF L + A + MK+IVRQ L AV+++++R E A+ ++ Sbjct: 1179 KQLTSQEAGKPFELALNKGAINSVTMKDIVRQQNSTLLSAVHNIVDRQGESAIDKIQQQL 1238 Query: 1160 PSQ---VPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDY 1216 P P A PE T + ++ Q + L + +Y Sbjct: 1239 PFDQYTAPTANDAVTPEKQATANINQSLNIISTLQLITDNPKKNQQLATEALPATVALEY 1298 Query: 1217 TGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRR 1276 RTP+ARE TLI+ + N++R + I ++ L EQ VP L + EL Sbjct: 1299 LARTPKARENTLIIAYTNKERDDITHEIRQGLQQQKSLSTEQFTVPRLRGVHASKAELAT 1358 Query: 1277 LSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAE-GNTRLISPREAVAEGVTLYTPD 1335 + ++ + Y I + K + ++TL D + G + P+ + L+ Sbjct: 1359 MLPYQQGLILTTG-KDSYFEIMKVDKLNNMLTLADMKTGEEKHFFPKNHGHKFTNLWAKS 1417 Query: 1336 TIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHID 1395 + GD + KSD +R N +TV+++ + L ++ + H D Sbjct: 1418 EQPLAEGDSIMLRKSDIDREMQGNKTYTVSSIDDKQMQLKSTDNHTLTLSTKDLKDAHWD 1477 Query: 1396 LAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQG-WT 1454 AY TA AQGA+ I +G + AY+ ++R +HV++ TDN Q Sbjct: 1478 YAYTRTADMAQGATYENVITAIKGQGA---LTNVRRAYIDITRASKHVKIITDNPQKMML 1534 Query: 1455 DAINNAVQKGTAHDVFEP-KPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPA 1513 +NN K +A + + P+ + ++ G L+ L + A Sbjct: 1535 SWVNNDPNKVSALETRDKYYPEHTPLFNDKPLPQENPKYLDVNGYVDLK---LMATELNA 1591 Query: 1514 RFIAPGRKYPQPYVALPAFDRNGK 1537 + A + P D++ K Sbjct: 1592 KLPAYSESLATQLLGEPNHDKSDK 1615 >UniRef50_B6ESZ2 Protein TraI (DNA helicase I) n=1 Tax=Aliivibrio salmonicida LFI1238 RepID=B6ESZ2_ALISL Length = 1936 Score = 819 bits (2114), Expect = 0.0, Method: Composition-based stats. Identities = 370/1574 (23%), Positives = 675/1574 (42%), Gaps = 125/1574 (7%) Query: 1 MMSIAQVRSAGSAGNYYTDKD-----------------------NYYVLGSMGERWAGRG 37 M+SI+ + SAG A YY D + NYY+ S W G+ Sbjct: 1 MISISPIASAGEATKYYLDDEKHLNGEQSELTTEKENSESDKEKNYYLKDSNNTAWFGKL 60 Query: 38 AEQLGLQG-SVDKDVFTRLLEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAML 96 A + GL G ++ D +L G L D + ++HR G+DLTFSAPKSVS++A++ Sbjct: 61 ATEKGLDGKPIEGDTLQAVLSGSLLDE----TIHGKRDKHRAGFDLTFSAPKSVSVLALV 116 Query: 97 GGDKRLIDAHNQAVDFAVRQVEALAS---TRVMTDGQSETVLTGNLVMALFNHDTSRDQE 153 GGD RL+D HN AV FA+ ++E A+ + + +++ L H TSR+ + Sbjct: 117 GGDTRLLDGHNNAVKFALSELEKDAAQVKYTEEDTKKQSYANSKSMLFGLVQHKTSREDD 176 Query: 154 PQLHTHAVVANVTQHN-GEWKTLSSDKVGKTGFI----ENVYANQIAFGRLYREKLKEQV 208 PQLHTHA+ AN+T+ G + L++ G I E VY NQ+ +G LY+ L +Q Sbjct: 177 PQLHTHALTANMTRDEQGRLRALATSLKQSGGVINGTMERVYNNQLYYGMLYQSHLSKQA 236 Query: 209 EALGYETEVVGKHGMWEMPGVP---VEAFSGRSQTIREAVGEDA--SLKSRDVAALDTRK 263 E+LGY + G +G +E+ GVP ++ FS RSQ I E + S ++RD+AA +TRK Sbjct: 237 ESLGYTIKGAG-NGQFEIEGVPQSLMDDFSKRSQQINEKTQDLGFNSQQTRDLAAKNTRK 295 Query: 264 SKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQA 323 +K H D + W T+K GFDI A+ + A + + P A+T+ Sbjct: 296 AKTHKDAVELNSTWQHTVKTDGFDITAFINNAKENPVKAPN----ENVIKPRAVDALTRT 351 Query: 324 IAGLSERKVQFTYTDVLARTV-GILPPENGVIERARAGIDEAISREQLIPLDREKGLFTS 382 I LS+ + Q +Y +++ + E + +DE I+ ++LI LD+ FT+ Sbjct: 352 INHLSKTQTQLSYEKMVSFAMSEFTKGEKLDALDIKLALDERIASKELIGLDKNNSQFTT 411 Query: 383 GIHVLDELSVRALSRDIMK--QNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQG 440 + +E + ++ + + + + + ++ L V+ G Sbjct: 412 TALLNNEKKLINSTKGRPRHMRTQPNDTALSQLNLNKENQNKLAELFLSTKQFNTVNVFG 471 Query: 441 GAAGQRERVAELVMMAREQGREVQIIAADR----RSQMNMKQDER---------LSGELI 487 + + L+ + E G+ + I+ +++ +K+ + + Sbjct: 472 SS---EQVAKGLLHVGSESGKRIHIMTQGGISQEKTERTIKRQSHTPLQWIKNTFRADFV 528 Query: 488 TGRRQLLEGM--AFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDS---GQRTG 542 G Q L F+ + + K S + + + + A N +++ + Q Sbjct: 529 HGVNQYLGDKVTPFSNKDVFVFEDSGKFSGDQLIDITNKAKHTNSKIIFLNHASARQGMK 588 Query: 543 TGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVS 602 + S++ + G Q I D N+ L +A V + Sbjct: 589 SHSSM-DLLSKGNTNNINWVNNQPTKAKIKIHDNNLN--ELVNQYAEKPDKNTIQVL-AT 644 Query: 603 GVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPE 662 + L AIR LK G + V+++ L+P +L R L Y+PGMV+ W+ Sbjct: 645 TNADVKTLNTAIRERLKQTGEVSRQGVSISTLNPHFLSQEQRTLSTHYKPGMVLRSWSEG 704 Query: 663 TRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTG 722 S +Y++ + ++++L + D +G + S ++S+F+ E + +A G+++ +G Sbjct: 705 AMS--QYIVSKPHRKTNTLDIIDEKGNQLTIDPSKPAHNFSVFKKESLEIASGDKIITSG 762 Query: 723 KIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSV 782 K +++ V + ++T+ E + T + + + T Sbjct: 763 KHYASQLAAHQAFIVKKATPQSITLE---DREGQQKTIKTKHLTDAPITHNFASTTQKIS 819 Query: 783 SDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKT 842 + + + LN L+ + ++ +++ E A+ + + T Sbjct: 820 DTATHLMVQTKAYSASKELLNELSLNRNNIDIFTDDKEKVAAQFEKNEVRPAAIERVMAT 879 Query: 843 RAGETSL-------------ETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLT 889 E A+ + ++A++ A+ + K+ ++ +L+ Sbjct: 880 TQPTEKYLSTLTTNTVTKDVEQALRLLNTPTSNNIEKAVNFAIHHISEKEAGYTQKELVM 939 Query: 890 EAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILE 949 +A ++ E TG +I +K ++ ++ + EK+IL + Sbjct: 940 QAIRYSLEETGTAISKEDIIDTLKNNQ--ETLSSEFSDGTRWTTKDAIHTEKTILDTLAR 997 Query: 950 GKEAVMPLMERVPG----ELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAV 1005 GK P + + +LT GQ+ + MI T DRF VQG AG GK+T Sbjct: 998 GKNQTTPFVTHAQATEFLQHESRLTQGQKESVHMIATTPDRFVAVQGLAGTGKSTMLEKD 1057 Query: 1006 MSAVNMLPE--SERPRVVGLGPTHRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFS 1063 + ++ + + ++ ++GL PTH AV E+++ GV+AQTL S L D Q + + T + Sbjct: 1058 IELIHSIDKLSNKETTILGLAPTHAAVNELKNKGVEAQTLQSLLADIQSGKTTANT--YQ 1115 Query: 1064 NTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADV 1123 TLFLLDESSM+GN DM AL+ +AV GD QLQ+++ G+PF L + +A + Sbjct: 1116 QTLFLLDESSMIGNNDMKHFTALVEKSDAKAVLLGDKAQLQSLSAGKPFELAMSSNALNR 1175 Query: 1124 AIMKEIVRQ-TPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHS 1182 M +IVRQ L AV++++++ E +LS L+ H Sbjct: 1176 TDMTDIVRQQNDTLLGAVHNMVDKQPESSLSKLKQQPN---------------ADTGIHK 1220 Query: 1183 QEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNS 1242 ++ ++ E L + +DY RT +++E TLI+ + N++R + Sbjct: 1221 THHVVSTYEKITPNHRENQEIATEKLAHVVAQDYLSRTEQSQEDTLIIAYTNKERDTITE 1280 Query: 1243 MIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISK 1302 I +++ +L KE ++P L + E+ + ++ + I + Sbjct: 1281 HIRHGLQQSNQLHKENTLMPRLRSIGATKEEMATMLPYKKGLVVKTG-KDTLSTIIHVDN 1339 Query: 1303 DDGLIT-LQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSV 1361 L+T + + G R P+ + + L+T + T D++ +D+++G AN+ Sbjct: 1340 KHNLVTVKEQSTGKERPFFPKNSDHKMTNLFTRSDQPLSTNDKVMMRMTDKDKGIEANTP 1399 Query: 1362 WTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEG 1421 +TV+ + + +TLS+ +Q + + H D +Y TA+ AQGA+ I Sbjct: 1400 YTVSNIENNLITLSNKKQHTITLSTTDLKDAHWDYSYTRTANMAQGATYKNVITAI---K 1456 Query: 1422 NRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTD-AINNAVQKGTAHDV-FEPKPDREVM 1479 R + AY+ L+R +HV++YTDN +NN K +A + P + Sbjct: 1457 GRGQLTNIRRAYIDLTRASEHVKLYTDNEGTMIKQWLNNQDDKRSAIETNTLSTPKESIT 1516 Query: 1480 NAERLFSTARELRD 1493 Sbjct: 1517 FNTAPLPKENPHYQ 1530 Score = 83.9 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 48/372 (12%), Positives = 120/372 (32%), Gaps = 21/372 (5%) Query: 1209 YEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTAN 1268 +V Y + + ++ N D + LN+ I + ++ GE+ ++ V + LN Sbjct: 623 LNELVNQYAEKPD--KNTIQVLATTNADVKTLNTAIRERLKQTGEVSRQGVSISTLNPHF 680 Query: 1269 IRDGELRRLSTWETHRDALVLVDNVY--HRIAGISKDDGLITLQDAEGNTRLISPREAVA 1326 + + + ++ + + ++ + + + D +GN I P + Sbjct: 681 LSQEQRTLSTHYKPGMVLRSWSEGAMSQYIVSKPHRKTNTLDIIDEKGNQLTIDPSKPAH 740 Query: 1327 EGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPG 1386 +++ +++ + +GD++ + A+ + V + S+TL D + ++ Sbjct: 741 -NFSVFKKESLEIASGDKIITSGKHYASQLAAHQAFIVKKATPQSITLEDREGQQKTIKT 799 Query: 1387 QEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVY 1446 + + I +A T A L A E LS + ++ ++ Sbjct: 800 KHLTDAPITHNFASTTQKI----SDTATHLMVQTKAYS--ASKELL-NELSLNRNNIDIF 852 Query: 1447 TDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGL 1506 TD+++ + A + L + A R + Sbjct: 853 TDDKEKVAAQFEKNEVRPAAIERVMATTQPTEKYLSTLTTNTVTKDVEQALRLLNTPTSN 912 Query: 1507 AGGDSPA----RFIAPGRKYPQPYVALPAFDRNGKSAGIWLNP-----LTTDDGNGLRGF 1557 + Y Q + + A + + G ++ ++ L Sbjct: 913 NIEKAVNFAIHHISEKEAGYTQKELVMQAIRYSLEETGTAISKEDIIDTLKNNQETLSSE 972 Query: 1558 SGEGRVKGSGDA 1569 +G + DA Sbjct: 973 FSDGTRWTTKDA 984 >UniRef50_D1RMM7 Conjugative transfer relaxase protein TraI n=2 Tax=Legionella RepID=D1RMM7_LEGLO Length = 1956 Score = 808 bits (2086), Expect = 0.0, Method: Composition-based stats. Identities = 373/1582 (23%), Positives = 677/1582 (42%), Gaps = 139/1582 (8%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMG----ERWAGRGAEQLGLQGSVDKDVFTRLL 56 M+++ ++ +A A +YYT +DNYY+ RW G GA++L L G ++ F +LL Sbjct: 1 MLTLNKISAAKDAVHYYTTQDNYYLSDRDSLNSLSRWIGNGAQKLQLSGQIEPSQFLQLL 60 Query: 57 EGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQ 116 +G+LP G L + G +HRPG D+T SAPKSVS++A++G D+RL+ AH +AV + Sbjct: 61 DGQLPSGQLLGIIDKGERQHRPGTDVTLSAPKSVSILALVGQDERLVQAHQEAVTITFGR 120 Query: 117 VEALAS-TRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVT-QHNGEWKT 174 +E LA+ R+ +G++ T NLV A+F H TSR+ +P LHTH + N+T + +G W++ Sbjct: 121 IEQLAAEARITFNGETTFEKTRNLVAAMFVHTTSRELDPDLHTHLPILNMTERSDGLWRS 180 Query: 175 LSSDKVG-----KTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGV 229 LSS GF E +Y+NQ G +Y L ++V+ LGY+ + ++G +E+ G+ Sbjct: 181 LSSRAKNDKEHLDHGFRELIYSNQHYLGLVYMSSLAKKVKDLGYDIRIKDRYGNFEVVGI 240 Query: 230 PVEAF---SGRSQTIREAVGEDASLKSR--DVAALDTRKSKQHVDPEIKMAEWMQTLKET 284 EA S R I + + E + ++ + + L TR K +D ++ +W++ +KE Sbjct: 241 SDEAITATSKRRVQILDDMKERGTSSAKAAEKSNLSTRNPKMEIDSQVLHQQWVEEIKEL 300 Query: 285 GFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTV 344 G D+R + + + PD Q+AV A+A LSE Q + ++ + + Sbjct: 301 GIDLRGVIQESKLNIGRGAIKSTQITPLSPDAQKAVNDALAHLSEYSTQIQHGALVRQAM 360 Query: 345 GILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNR 404 E I+ +S E L E +T+ + E A + + +K + Sbjct: 361 -TFSAGLVEHEDIEREIESLLSVETLQGNPLE--YYTTASLLAREKDFIAKTTNELKASF 417 Query: 405 VTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQ 464 P + + + ++ + I+ G ++E + ++V +A Sbjct: 418 SISVPNHGLTSS---------VFKNNERIQIID-VAGFRCEKELIQDMVDLAEANQLNSY 467 Query: 465 IIAADRRSQMNMKQDE-RLSGELITGRRQLLEG---------------------MAFTPG 502 ++ ++ D L I+ + L + Sbjct: 468 VLHPGSLKTQQLRADIKHLDTGFISRIKNLFKDDIVHTVSGFQYHYGKHIKASPFTKKKQ 527 Query: 503 STVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRT---GTGSALMAMKDAGVNTYR 559 VIV +KLS + L D ++++ ++ T G+ + +K+ GV++Y+ Sbjct: 528 DLVIVHDAQKLSFDDLSALSDMTQASQSKLILLNNSAGTLGFSAGNPIKVLKEQGVHSYQ 587 Query: 560 WQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELK 619 + +S + + + A + + ++S +++ +T+ IR L Sbjct: 588 SLTTPIKGELKLSVG-KQINKSMSAAWLQLTPEQQQKSALVALNSKQKEAITRQIREGLV 646 Query: 620 TQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSH 679 QG L + L+ V L + Y+ G + +N R Y + V S Sbjct: 647 QQGQLSRQMKKVAVLATVSLTQTEKGYAHSYKTGDNITFYNEG-RIPKHYKVCEV--DSK 703 Query: 680 SLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDR--LQV 737 L L +AQG+T + + + R + + +A GERL + RV + V Sbjct: 704 GLHLENAQGKTSLFAY-ETKEDFRVSREKILEIAVGERLINEQSLYHQRVKYAPKSSFVV 762 Query: 738 ASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAM 797 + V+E+ + V R E TL +++ + + + + P D+ V + + Sbjct: 763 SKVTEEGIYV----RHESNTLFLTNKVLSEHHFDYDYCKKPHEIKPDTNQVLVAAKPYQL 818 Query: 798 DNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQK 857 + + + + + ++ A++ + +++ + + I++ Sbjct: 819 NRNLIGEIGENA--QHVLLFTEDEPKAQRFLEREQLKWTAYEVQQKKPDLVYR-DIAYAN 875 Query: 858 SALHTPAQQAIHL------------------ALPVVESKKLAFSMVDLLTEAKSFAAEGT 899 AL IH AL + AF DL+T A A Sbjct: 876 KALAREINSLIHHLELKSEDKKGIAATALTYALAKCTERNAAFKHSDLITHALMHALGEA 935 Query: 900 GFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLME 959 F ++ + A++ L+Y+D ++ + E++IL+ + + V P+ Sbjct: 936 DFEDIAPLLKARMADS-LVYLDT-------YWTTKEALHIEEAILKANYQEQNTVQPIEP 987 Query: 960 RVPG--ELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESER 1017 V L E LT GQ+ A +++ TSDRF +QG AGVGKTT R V + +S + Sbjct: 988 SVQKLLSLPETLTQGQKDAITLVVSTSDRFVSIQGLAGVGKTTMMRHV----KDIAQSNQ 1043 Query: 1018 PRVVGLGPTHRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGN 1077 +V+GL PTH+AV E+ G+ AQT+ SFL + +N L ++DESSM+ N Sbjct: 1044 FQVLGLAPTHKAVEELNVNGIQAQTVDSFLRNDGG--------LGANHLVIVDESSMIDN 1095 Query: 1078 TDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQ--TPE 1135 R V +GD QLQ++A G P L + A M EIVRQ PE Sbjct: 1096 EKYHALQQKCIDTQSRMVFTGDITQLQSLASGIPHELTIKSQSQKTAFMTEIVRQNPNPE 1155 Query: 1136 LREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAM 1195 L++A R++ +AL ++++ P + +++ + + Sbjct: 1156 LKKAAEFASRREIGKALELIKNIDPEEYVQRKTPIHGLSHSSLV-------------EIK 1202 Query: 1196 LKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELG 1255 E ++Y I D+ RTPE ++ TLIV H +EDR + ++ D K +L Sbjct: 1203 CMDEEGKKDYKSIYRTIADDFLSRTPECQKNTLIVAHAHEDRTPIEVLLRDGLRKQHQLH 1262 Query: 1256 KEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVD------NVYHRIAGISKDDGLITL 1309 + V+ L ++ + + ++E + + Y + I ++ + Sbjct: 1263 NQDVLCKRLFPVSLDQADQVKAHSFEPGDVIRFGKNYSVAKKDEYFTVKSIDREANKLFC 1322 Query: 1310 QDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSG 1369 D IS + Y + +GDR+R ++D RG +AN +TVT V G Sbjct: 1323 VDESQVAFAISASILPKTMPSFYKLHERPLASGDRIRLKRNDDARGIIANEEYTVTQVFG 1382 Query: 1370 DSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGF 1429 +SV LS+ + + +EQA+ H D AY TA+ +QGA+ F IAL NR ++ Sbjct: 1383 ESVGLSNHKNQVTLNL-KEQADLHWDYAYTNTAYSSQGATSKFMIAL--ELENRLVVTTH 1439 Query: 1430 ESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTAR 1489 S + +R YTDN +G + + + +++ A + E + + Sbjct: 1440 RSHEIDATRASHQATFYTDNIEGLVNRLEDPLKQRDA-------DKTSAVLTEEAYCLKQ 1492 Query: 1490 ELRDVAAGRAVLRQAGLAGGDS 1511 + + + + + R ++ Sbjct: 1493 QKQQRISTQLIDRAQEPILDEA 1514 >UniRef50_D0Z588 IncF plasmid conjugative transfer DNA-nicking and unwinding protein TraI n=3 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z588_LISDA Length = 1980 Score = 795 bits (2053), Expect = 0.0, Method: Composition-based stats. Identities = 390/1639 (23%), Positives = 685/1639 (41%), Gaps = 146/1639 (8%) Query: 1 MMSIAQVRS-AGSAGNYYTDKD--------------------------------NYYVLG 27 M+S++ +R A A YY +++ NYY+ Sbjct: 1 MLSLSSLRGGASGASKYYLEEEKQLHLNQPQFTLKTDTQPTKDSPLPPTDNPTANYYLAE 60 Query: 28 SMGE----RWAGRGAEQLGLQG-SVDKDVFTRLLEGRLPDGADLSRMQDGSNRHRPGYDL 82 G +W G+ AE+ G+ G ++ +L G+L + + S+ R GYDL Sbjct: 61 QSGTKKTTQWYGKIAEKEGILGHEIEHQKLEAVLNGQLNNDQ---TPRAHSDTRRTGYDL 117 Query: 83 TFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEA-LASTRVMTDGQSETVLTGNLVM 141 FSAPK S++A++ GD R+IDAHN AV A+ +E A +V + + T NL+ Sbjct: 118 VFSAPKGASILALVYGDTRIIDAHNAAVKTALDLLEQDTAQAKVTENKEGRFENTQNLLF 177 Query: 142 ALFNHDTSRDQEPQLHTHAVVANVTQHN-GEWKTLSSD----KVGKTGFIENVYANQIAF 196 L H T+R+ EPQLHTHA+ AN+T N G K L+S G E + N + Sbjct: 178 GLVQHKTNRNNEPQLHTHALQANMTYDNQGNLKNLASSFVQNGFETQGTYERILENAKYY 237 Query: 197 GRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP---VEAFSGRSQTIREAVGE--DASL 251 G Y +L +E +G+ + +G +G ++ G+P +EA S R + I E E +S Sbjct: 238 GMAYHSELGRALEGMGFAIKSLG-NGQIDIDGIPTEVIEANSTRREEILEYANETGHSSG 296 Query: 252 KSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQ 311 KSR +AA TRK+K + + + EW + FD A+ A+ + S Sbjct: 297 KSRMIAAHQTRKAKTYTPEDSLVKEWQTKNEALKFDGLAFVAASYNGEHRKDND---ISV 353 Query: 312 DGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIE-RARAGIDEAISREQL 370 ++QQA+ +I+ LS+R F Y VL + P+ + +D I L Sbjct: 354 PDKELQQAIDNSISYLSDRLSAFGYEKVLVTALDKFAPKAITQMGELKQALDNKIKHGDL 413 Query: 371 IPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVH--PEKSVPRTAGYSDAVSVLAQ 428 I LD ++ LFT+ V E + ++ RV + A ++ + Sbjct: 414 IALDDKQSLFTTQEQVDREAKLIESTQKRTHGLRVHADSTALNELNLKADTKKTLADILA 473 Query: 429 DRPSLAIVSGQGGAAGQRERVAE-LVMMAREQGREVQIIAADRRSQMNMKQDERLSGELI 487 + +V+ +G ++++E L+ ++ G+ + I ++ + +Q R + Sbjct: 474 STKQVNVVN----LSGSSKQLSESLLHVSENSGKSIHFITPNKLVKQQTEQQVRRQAFSV 529 Query: 488 TGR----------------RQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQ 531 T E T S ++V+ +L +KET L+D A R + Sbjct: 530 TQWVKNAFRPDVVHTAYQYLNQAERRQKTKDSILVVEHANQLGVKETQQLIDLAQRQGNK 589 Query: 532 VLITDSG---QRTGTGSALMAMKDAGVNTYRWQGGEQRPATII-SEPDRNVRYARLAGDF 587 ++ + Q G+A+ ++ V T+ WQG + I SE D+ R+ LA + Sbjct: 590 LVFLNHTKRSQGLRAGNAMDVVQKGNVQTHTWQGAQLAQTHIKTSEVDKKERHQILAERY 649 Query: 588 AASVKAGEESVAQVSGVR-EQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYL 646 K ++ + + L + IR +L G L V + L+PV++ + Sbjct: 650 QELSKQERSETQVLTTNKGDNDNLNRVIRHQLDKSGQLSEKRVEIPTLNPVFMSPEQQRS 709 Query: 647 RDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFR 706 Y+ GMV+ Q N +Y +++V +++ +L L D+ + + + + + + Sbjct: 710 IKSYQKGMVISQVNDGK--VQQYTVEKVNSRAQTLQLLDSDNNRSYLNVKESSTPYFVSQ 767 Query: 707 PEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFT 766 P+K+ VA G+RLR+ G + + D + V + ++ + + +P+S + Sbjct: 768 PDKIEVATGDRLRINGDVFRTDLKQNDTVTVEKIGWMGLS-LTDDNGKGHLVPLSYLEGS 826 Query: 767 ALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDV-RLYSSLDETRTAE 825 A L G+ T ++ T + TL L + G +++ E A Sbjct: 827 A--LSYGYANTLNNAAHGKTTTLVEMQSYTASKETLYELMQQGSKQLHIFTDNQEKLEAR 884 Query: 826 KLARHPS---------------FTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHL 870 H V ++ +T + ++ + A +QA++ Sbjct: 885 MEKSHIQPSSMARVMASTQSLDKYVNAQTAETLQSDVTMAVQALLDQQAPKPLIEQAVNF 944 Query: 871 ALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTG- 929 AL V ++ F +L+ EA FA + G T L EI+ ++ ++ + G Sbjct: 945 ALDHVSEQQAGFKHSELVVEAIRFAMDEKGTTVLESEIHNKLNELQQQDSVLSAQFSDGT 1004 Query: 930 LLVSRASYEAEKSILRHILEGKEAVMPLMERVPGEL----MEKLTSGQRAATRMILETSD 985 ++ + + EK IL + GK V + + +T GQ+ A +++ T+D Sbjct: 1005 RWTTKEAIDTEKRILTRLDAGKGQVASYASERQADAYLAQQDWMTDGQKEAIKLMATTND 1064 Query: 986 RFTVVQGYAGVGKTTQF---RAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVDAQT 1042 R+T+VQG+AGVGK+T + ++ L + V+GL PTH AV E++ G+ AQT Sbjct: 1065 RYTIVQGFAGVGKSTMLEQGKTLIEQTQALHGNANIDVLGLAPTHAAVNELKEKGIPAQT 1124 Query: 1043 LASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQ 1102 S L D + + + NTLFLLDESSM N AL+ G RA GD Q Sbjct: 1125 TQSLLKDLLTGDTTPDK--YKNTLFLLDESSMASNAQFDAFTALVNNSGARATLLGDIYQ 1182 Query: 1103 LQAIAPGQPFRLQQTRSAADVAIMKEIVRQ-TPELREAVYSLINRDVERALSGLESVKPS 1161 LQ+ G+PF L + D +MK+I RQ TPEL AV ++IN+ E L ++ P Sbjct: 1183 LQSKEAGKPFELAYRSKSVDTVVMKDIQRQQTPELLSAVQNVINQQSESMLEAIKQQSPL 1242 Query: 1162 QVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTP 1221 + + + LY++ +Y RTP Sbjct: 1243 P-----------------GSHHNQTVVSTYNETGNSAKDREVAKEELYQSAAAEYLSRTP 1285 Query: 1222 EAREQTLIVTHLNEDRRVLNSMIHDVREKAGEL-GKEQVMVPVLNTANIRDGELRRLSTW 1280 E+RE TL++ + N +R +L +I ++ EL K V L EL+ + + Sbjct: 1286 ESRENTLMIAYSNRERDILAGLIRKGLKEMKELLDKSDTPVTRLRGIGTTKEELKTMMPY 1345 Query: 1281 ETHRDALVLVDNVYHRIAGISKDDGLITLQD-AEGNTRLISPREAVAEGVTLYTPDTIRV 1339 + + + Y I I + + L+ + + G P + TL++ + + Sbjct: 1346 KAG-LIINTGRDTYLHIDSIDRRNELLMVTNMTTGEQTSFIPARHDHKMTTLWSSSEMPL 1404 Query: 1340 GTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYA 1399 +GD++ + K+D+E G N TV+ ++ D++ LS+ + H D Y Sbjct: 1405 TSGDKITWRKTDKELGLTGNMDLTVSDINKDTIMLSNNDGKHVTLSLSDMKSSHWDYRYT 1464 Query: 1400 ITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGW-TDAIN 1458 TA AQG++ I++ +E + AY+ +SR QH ++TDN +G +N Sbjct: 1465 KTADMAQGSTTNHVISVIDSEA---KLTNLRRAYIDISRASQHAMIFTDNEKGLMRSWLN 1521 Query: 1459 NAVQKGTAHDVFEPKPDREVMNAERLFSTAR-ELRDVAAGRAVLRQAGLAGGDSPARFIA 1517 + +A + + + ER F T + + + L D + Sbjct: 1522 HFDNNSSAIETVN----KTYHSNERHFDTQSIPRENPKYQQHGEFKLSLYAKDLAQQLTP 1577 Query: 1518 PGRKYPQPYVALPAFDRNG 1536 + P ++ Sbjct: 1578 YTESLAIELLGQPNNSKSD 1596 >UniRef50_Q8D674 ATP-dependent exoDNAse, alpha subunit n=14 Tax=Vibrionales RepID=Q8D674_VIBVU Length = 1928 Score = 776 bits (2004), Expect = 0.0, Method: Composition-based stats. Identities = 392/1555 (25%), Positives = 654/1555 (42%), Gaps = 135/1555 (8%) Query: 1 MMSIAQVRSAGSAGNYYTDK----------------DNYYVLGSMGER---WAGRGAEQL 41 MMSI+ +RS +A YY ++ DNYY+ W G+ A++ Sbjct: 1 MMSISPLRSPSNAAQYYLNEENTQDLPDTSLEKDASDNYYLKEKQQGENTFWHGKLAQEA 60 Query: 42 GLQG-SVDKDVFTRLLEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDK 100 GL G V++ +L G L D ++ H+ G+DLTFSAPK+ S++A++GGD Sbjct: 61 GLLGKPVEQKTLETILSGTLNDE----TIKGKREDHKSGFDLTFSAPKNASILALVGGDS 116 Query: 101 RLIDAHNQAVDFAVRQVEALASTRVMTD--GQSETVLTGNLVMALFNHDTSRDQEPQLHT 158 RLI+AHN AV FA+ ++E + T+ G+ E T +++ A+ H TSR+ +PQ+H+ Sbjct: 117 RLIEAHNNAVKFALSELEKDVAQATHTNEAGEREFHNTQSMIFAVVRHKTSRNNDPQVHS 176 Query: 159 HAVVANVTQH-NGEWKTLSSDKVGKTGFI----ENVYANQIAFGRLYREKLKEQVEALGY 213 HA+ AN+T+ G +TL+S+ K G I E +Y Q + LY+ + + E LG+ Sbjct: 177 HALAANMTRDQEGNLRTLASNLKQKGGVINGSGERIYNFQKYYTALYQSQFARESEELGF 236 Query: 214 ETEVVGKHGMWEMPGVPV---EAFSGRSQTIREAVGE--DASLKSRDVAALDTRKSKQHV 268 +T+ +G + +++ GVP +AFS R Q I + V E + SRD AALDTR+ K + Sbjct: 237 QTKGLG-NAQFDIDGVPESLHKAFSTRKQQIDQQVMEFGHDTQASRDTAALDTRQRKTYH 295 Query: 269 DPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLS 328 +W QT+K GFD + P +A + A+ L Sbjct: 296 SDSTLNHKWQQTVKGEGFDPALLVKQSQ-------AMPQKGGHAMQQAHEAFSHAMTHLG 348 Query: 329 ERKVQFTYTDVLARTVGILPPENGVIERA--RAGIDEAISREQLIPLDREKGLFTSGIHV 386 + + V+ + DE I QL+PL EKG +TS + Sbjct: 349 QYSTSLSLEKVIEVAASDFTKGTQQANAIDLKQVADEWIKNGQLVPL-AEKGHYTSQTML 407 Query: 387 LDELSVRALSRDIMKQNRVTVHPEKSVPRTAGY--SDAVSVLAQDRPSLAIVSGQGGAAG 444 +E ++ +++ R + V+ L +V+ G + Sbjct: 408 KNEKALMDITKGRTHNMRTNIDEPTLNRLNIAQDNRQKVADLYGSTKQFHVVNVFGSS-- 465 Query: 445 QRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGEL-ITGRRQLLEGMA----- 498 + L+ G+ VQ+++ + + + +Q+ +T + L + Sbjct: 466 -EQIAQNLLNAGNHSGKRVQLVSQNTQHHRHNQQNIPRESHTFVTWVKHLFQDDQRHTLQ 524 Query: 499 --------FTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITD---SGQRTGTGSAL 547 T ++VD K+S E L+L + A N +V++ + + Q SA+ Sbjct: 525 GLLDSKHPLTNKDIILVDNANKMSANELLSLSEKAGNSNSKVILLNRVSNRQGMKAHSAI 584 Query: 548 MAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQ 607 V T+ W +Q + + N +A +A V SGV EQ Sbjct: 585 DLYSKGNVTTHTWVNSKQADSVVRL---HNREDHNIALTYADLPDKTNAQVLATSGV-EQ 640 Query: 608 AILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHD 667 LT IR+ LK G L VT+ P +L + Y+ GM + QW+ Sbjct: 641 RRLTNEIRAALKNDGQLSRTSVTVFTQQPHYLSKPQQQFAKHYQSGMTLRQWDKGK--PH 698 Query: 668 RYVIDRVTAQSHSL-TLRDAQGETQVVRISSLD---SSWSLFRPEKMPVADGERLRVTGK 723 +VI V S++L L G+ SS + L++P+ + ++ GER+ T K Sbjct: 699 DFVIASVDKASNTLEVLSKTDGKASTFDPSSKAFQSMNMQLYKPDALEISQGERILATNK 758 Query: 724 IPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVS 783 ++ G V S++++++T + + + +TLP+ L + + H Sbjct: 759 HFPSQLEAGHHYLVTSITKNSLT-LTNQQGQSSTLPLDK--LKDAPLTYDYAHSANHFEP 815 Query: 784 DSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDET-----RTAEKLARHPSFTVVSE 838 T+ S + A LN L S + +++ E AE + ++ Sbjct: 816 REHTLL-SGKAFTLSKALLNDLTESSARLDIFTDHPEKAQQALEKAEVRPSAIERVLHTQ 874 Query: 839 QIKTRAGETSLETAISH---------QKSALHTPAQQAIHLALPVVESKKLAFSMVDLLT 889 I R + E+ + H K +Q+A+ AL + K+ F+ +L+ Sbjct: 875 HINDRYLSEATESTLRHDIEHAIGVLAKEQHAPVSQKAVDFALNHLSEKEAGFTQKELVI 934 Query: 890 EAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILE 949 EA FA E T I A++ + A+ + A+ E EK IL +I + Sbjct: 935 EAVRFAFEETNSPITKAHIEAELA--ERSDTLSAEYSDGTRWTTEAAIETEKHILSNIEQ 992 Query: 950 GKEAVMPLMERVPG----ELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAV 1005 GK P E LT GQ+ + +I T D F +QG AG GK+T Sbjct: 993 GKGQHSPFATSKQVHSYLEAQSCLTHGQKNSIHLISTTKDSFVAIQGLAGTGKSTMLETN 1052 Query: 1006 MSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNT 1065 + + +++ +++GL PTH AVGE+ S GV AQTL S L D +Q D+ NT Sbjct: 1053 IELIAQAGKNQPDQIIGLAPTHSAVGELESKGVKAQTLESLLTDI--RQGRASPEDYKNT 1110 Query: 1066 LFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVA- 1124 LF LDESSMV N L+ +AV GD +QL ++ G+PF L T+ D A Sbjct: 1111 LFFLDESSMVSNKQAKELTDLVLQSQSKAVLLGDKEQLLSLNAGKPFELAMTKGIIDTAQ 1170 Query: 1125 -----IMKEIVRQTP-ELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTE 1178 M +I+RQ AV++++++ + AL L + + Sbjct: 1171 IIESEQMTDIIRQRNKATLGAVHNILDKQPDSALDKLSQQGADKQGK------------- 1217 Query: 1179 FSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRR 1238 + ++ +A L + +DY RT E RE TLI+ + N +R Sbjct: 1218 ----TQHVISTLTDNPQDPRKAQQIATEKLPYEVAQDYLSRTQETRENTLIIAYTNNERD 1273 Query: 1239 VLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIA 1298 + I K ELGKE V+VP L + EL+ + ++ Y I Sbjct: 1274 AITEHIRHGLIKKNELGKENVIVPRLRSIGASGEELKTMMPYQKGLVLS-TKPGQYGTIT 1332 Query: 1299 GISKDDGLITLQ-DAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYV 1357 + + G++ ++ G PR + L++ + TGD++ +D+ RG Sbjct: 1333 KVDSEHGVVVVKSHETGKESAFLPRHRDHKFTALFSVSHKPLSTGDKIITRFTDKTRGIK 1392 Query: 1358 ANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALE 1417 AN V + ++V ++ + H D AY TA AQGA+ I Sbjct: 1393 ANVVHHIVQADNNAVIAQSKNGQSLTIDPEKIKDGHWDYAYTRTADMAQGATYQNVI--- 1449 Query: 1418 GTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTD-AINNAVQKGTAHDVFE 1471 + + + AY+ L+R +HV++YTDN + ++ V K +A + + Sbjct: 1450 TSIKGKGALTNLRRAYIDLTRASEHVRLYTDNPKQMMKSWLSKEVNKASAIETVK 1504 >UniRef50_C9NPT5 Putative conjugative transfer protein TraI n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NPT5_9VIBR Length = 1685 Score = 764 bits (1971), Expect = 0.0, Method: Composition-based stats. Identities = 411/1737 (23%), Positives = 685/1737 (39%), Gaps = 142/1737 (8%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGL-QGSVDKDVFTRLLEGR 59 M+++ + SA A YY + + W G+ A++ GL + V+ F L G Sbjct: 1 MLTLIPLSSAARAAQYYLVDEQEKTGQARAGYWLGKLAKEAGLWRQKVEPKCFLEALRGH 60 Query: 60 LPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEA 119 + A + R ++H PG D+TFSAPKS+S++A+LGGD+RL AH AV +A+ +E Sbjct: 61 VQGEATVGRR----SQHAPGLDVTFSAPKSLSLLALLGGDQRLRQAHEHAVHYALTALER 116 Query: 120 LA-STRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ-HNGEWKTLSS 177 A RV + GQ V TG+L++A+F H TSR +PQLH+HAV+ N+T+ G + L+S Sbjct: 117 EAAQARVQSQGQLAYVETGSLLVAVFEHTTSRAHDPQLHSHAVITNLTRVAQGPLRALAS 176 Query: 178 DKVGKT----GFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP--- 230 ++ G E ++A+Q + LY L + V ALGY E +G +++ GVP Sbjct: 177 CTRQRSSVLNGTFERLFAHQKYYSALYHGHLAKSVTALGYRLEPQA-NGAFDIVGVPRSV 235 Query: 231 VEAFSGRSQTIREAVGEDA--SLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDI 288 +EAFS R I++ S +RD+AAL TR K + EW L G+ Sbjct: 236 IEAFSVRRAQIQQWQRARGWDSPSARDIAALCTRVEKATEHSVNPLPEWQSRLVALGYTP 295 Query: 289 RAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILP 348 DAA + P + +AVT AI L+ + + ++ Sbjct: 296 EQLLDAARRGP------PRVPLPMINEANRAVTLAIDHLTRYQTAMSMEHIVQVAFDRFN 349 Query: 349 PEN-GVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTV 407 + ++ + +++ I +QLI L +G +T+ + ELS+ A +R K Sbjct: 350 DQPSLTVQAVKNAVEQRIKDKQLIALP-TQGHYTTAELLHRELSLLACARRRHKVPGQRP 408 Query: 408 HPE--KSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQI 465 HP +S +A ++ L + ++ QG + ++ R G + Sbjct: 409 HPHLLESRHLSAAQRMCLTTLIRSTRPFHVIDVQGEPGALND---HVLDALRISGLGSHV 465 Query: 466 IAADRR-----------SQMNMKQDERLSGELITGRRQLLE-GMAFTPGSTVIVDQGEKL 513 + + RR + + + +RLS T Q L G V+VD +L Sbjct: 466 VFSRRRDIRQWWTRHSAAPRSRQWLQRLSSITPTILHQFLAAPPPLRRGEVVVVDDARQL 525 Query: 514 SLKETLTLLDGAARHNVQVLITDSGQRTG---TGSALMAMKDAGVNTYRWQGGEQRPATI 570 + ++ L D + ++++ + R +AL + V+TY WQ EQRP+ + Sbjct: 526 NAEQLRQLCDIVTQSQNKLILLNRHTRQPSAWARNALALFRCGHVSTYVWQSQEQRPSKV 585 Query: 571 ISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVT 630 + + + D A + + + R A LT +R L+ G L P V+ Sbjct: 586 VLTGEEDRSLTSRLLDAALDPRWE----IRTASRRTHADLTHRVRELLRVHGHLSGPSVS 641 Query: 631 MTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGET 690 + A WL + L Y+PGM + + + V Q + + L +G+ Sbjct: 642 LLADVCQWLSPSEQRLTKYYQPGMRLRYR--YRDRWVQGHVHTVDRQRNCIELMTDKGKV 699 Query: 691 QVVRISSLDS---SWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTV 747 V + ++ S ++ + +A GERL T P + + G +V S TV Sbjct: 700 PVRLDLTSEAASLSAQVWVSHPLNIAKGERLIATQNEPNIGLEEGLAYRVVKCSP---TV 756 Query: 748 VVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLAR 807 V + +SD ++ L ++ P +F + + L L Sbjct: 757 CVLKGPDGGVHRLSDLTRSSWPLAYHYLAGPSDRHPKPYLLFVA-PAYTLSKTLLEPLCA 815 Query: 808 SGRDVRLYSSLDE--TRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTP-- 863 R + L++ + E P TA + + + Sbjct: 816 RYRRIDLHTDDRPLAHQRLEHADVRPCAIERLLSPHPTIDRYLDRTAATDIERDVKQALH 875 Query: 864 ----------AQQAIHLALPVVESKKLAFSMVDLLTEAKSFA----AEGTGFTELGGEIN 909 A+QA+ AL + + AF L+ E+ FA EG ++ E++ Sbjct: 876 LVAPLANASVAKQAVAFALHHCATTQAAFRQRTLVIESIRFALAESREGLTLNDILAELD 935 Query: 910 AQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELME-- 967 Q + D + + E++IL H+ ++ PL E + Sbjct: 936 GQRTLLSRAFQDGT------RWTTDRALAQERAILSHLHTQRDTQPPLTPPSALETLLST 989 Query: 968 --KLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPES---ERPRVVG 1022 +LT GQR A +I + DRF VQG AG GK+T + V+ V +++G Sbjct: 990 RPQLTPGQRQALSLITTSRDRFVAVQGLAGTGKSTLLKEVLQLVREAQSDIARPPKQLLG 1049 Query: 1023 LGPTHRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMAR 1082 L PT AV E++ G+ A TLA L Q R + F +LF LDE +M+GN + R Sbjct: 1050 LAPTRSAVRELKRQGLPATTLAQCLAR--YQDRRTSSATFCRSLFFLDECAMLGNPQLLR 1107 Query: 1083 AYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQT-PELREAVY 1141 L+ RAV GD QL A+ G+PF L R A + +IVRQ P LR AV Sbjct: 1108 FLRLVIDSNSRAVLLGDRHQLLALEAGKPFALAIERGWIKTAYLHDIVRQRTPNLRRAVQ 1167 Query: 1142 SLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAF 1201 ++ A+ L P R + + + + Sbjct: 1168 HFVDGQPGSAIHCLSKQAPDHATRAPTIVSTHDLMPSEDKANPS---------------- 1211 Query: 1202 PDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMV 1261 LY+ +V D+ RTP+ R QTLI+ H + +R + +++ R + GEL V Sbjct: 1212 ------LYQQLVDDFLSRTPDTRRQTLIIAHTHVERDAIATVMRAARRERGELPDRSVPT 1265 Query: 1262 PVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGN-TRLIS 1320 P L N E + ++ R L N Y IA + G++TL + + R++ Sbjct: 1266 PRLRAINTTPAERGTMMPYQPGRVLS-LHPNHYETIAEVDPTTGIVTLASSTPDAPRVVL 1324 Query: 1321 PREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQT 1380 P E LYT + D + F ++ R + +N + V +S + L + Sbjct: 1325 PLERDHTHTQLYTLSHPSLSVNDWIVFRQATRGDPWCSNERYVVERISTTGIQLRSERGQ 1384 Query: 1381 REIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMK 1440 R E A+ H D Y TA AQG + +++ ++G + AYV +SR + Sbjct: 1385 RVAFNPFELAQAHWDYDYTRTADMAQGMTVDCVLSVVRSQGA---LTSLRRAYVDVSRAR 1441 Query: 1441 QHVQVYTDNRQGWTD-AINNAVQKGTAHDVFEPK-PDREVMNAERLFSTARELRDVAAGR 1498 V +YTD + + ++ + +A D + P R V E+ A G Sbjct: 1442 DRVCLYTDAPEALVNTWLSRPCEAFSALDTIDGTIPARTVYFNEQPNLADDPRFHTALGE 1501 Query: 1499 AVLRQAGLAGGDSPARFIAPGRKY----PQPYVALPAFDRNGKSAGIWLNPLTTDDGNGL 1554 +R+ + R+ P P + P + G L ++ Sbjct: 1502 YDVRRLEAHLNHALPRYTESLATQLFGCPDPERSTPQWLVFGPRDRPTLVCVS----GPK 1557 Query: 1555 RGFSGEGRVKGSGDAQFVALQGSRNGESLLADNMQDGV-----RIARDNPDS-GVVVRIA 1608 RG + + + Q +R +M D +P+ + + A Sbjct: 1558 RGHITDTQTGRTHSLLSTLAQRARLPHDAFLAHMHDTFCRGLPPTITAHPNHDAYIKQPA 1617 Query: 1609 GEGRPWNPGAITGGRVWGDIPDNSVQPGAGNGEPVTAEVLAQRQAEEAIRRETERRA 1665 W P +V+P E R I R+T +R Sbjct: 1618 PAWPRWTPS-------LPAQTSEAVEPHDPWWECWAPVPTVDRDLLHDIDRDTLQRT 1667 >UniRef50_A4WGU6 ATP-dependent exoDNAse (Exonuclease V) alpha subunit-helicase superfamily I member-like protein n=2 Tax=Enterobacteriaceae RepID=A4WGU6_ENT38 Length = 1807 Score = 747 bits (1927), Expect = 0.0, Method: Composition-based stats. Identities = 474/1498 (31%), Positives = 759/1498 (50%), Gaps = 70/1498 (4%) Query: 266 QHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGP---DVQQAVTQ 322 Q V PE + A + T + + T P ++ +AV Sbjct: 342 QDVSPERETANNQTEAQSTDTLSQPVHAGPGKMPSTGTSLREPQLHTDAPLPELAEAVRL 401 Query: 323 AIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTS 382 AI+ LS+ K +FT+ +++ L + + R ID ++ ++PLD EKG+FTS Sbjct: 402 AISQLSDSKTRFTFGELMLTAAE-LSDTLPDMNQVRQAIDVSLKEGMIVPLDSEKGVFTS 460 Query: 383 GIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGA 442 IH+LDELS++ALS++ +K V ++ ++ +L +++ G Sbjct: 461 RIHLLDELSIQALSQEHLKSTAVVSFTR------PEQYAPPALSVVEKDALVLMNAPSGV 514 Query: 443 AGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPG 502 AG R+ A+L ++ QGR+VQ++A+ +++++ + L L++ + L P Sbjct: 515 AGIRDLTAQLTGISLAQGRDVQVLASSAERALSLEKSDALRDRLVSRQHVLSGDFHLKPQ 574 Query: 503 STVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMKDAGVNTYRWQG 562 ST+I++ E+L LKETL LL A + Q++ DS R G+A+ ++ AG+ R Sbjct: 575 STLIIEGAERLGLKETLVLLGEARAQDAQLVFLDSAGRQANGNAMSVLESAGIARSRRTE 634 Query: 563 -GEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQ 621 A ++S ++ RY LA +A E A V G REQ LT IR L+ Sbjct: 635 PAPGLEAEVVSITNKRDRYEALAIRYADLSGGAENVTAVVVGKREQTHLTGLIRDALQNA 694 Query: 622 GVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSL 681 G L V + A PVWLD+++R + YRPGMV+E + + H YVIDRV + L Sbjct: 695 GQLAREGVEIEARQPVWLDTKTRRMSGSYRPGMVLEDRSDKKERHS-YVIDRVHEDTRML 753 Query: 682 TLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVS 741 +L D G ++IS + + W L+ E + VA GERL + DRL+V +S Sbjct: 754 SLIDGDGVLTRMKISEVTADWRLYNRETLSVATGERLMSVAGDREHNLKAKDRLEVTQIS 813 Query: 742 EDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNAT 801 E + V R + + D P L + + +V PG +D+ V A++ + T Sbjct: 814 EKGIEV---KRGDDILMLPKDQP---LYVTHAYVSAPGGRDNDAGVVLAALNSRDISTQT 867 Query: 802 LNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALH 861 +N LA+SG ++++ D+ R +L R + + +++ +G+ + A+ ++ Sbjct: 868 MNSLAQSGHRAEVFTAEDQDRAEARLQRMKTNASPVQLVRSLSGKEDVSEAVGRLHDSVR 927 Query: 862 TPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVD 921 T A A+ A+ + + + FS + L + A+ + F ++G EI++ +KRGDLL V Sbjct: 928 TEAGLAVWRAIN--DQRHVTFSELTLASAAEKYHP---DFDQIGDEISSMVKRGDLLKV- 981 Query: 922 VAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMIL 981 G LLV+R+++E EK+ILR + EGK PL+++VP ++ LT GQ+ AT ++L Sbjct: 982 --SAGGEPLLVARSTWEMEKAILRVVDEGKNTQQPLLDQVPSAVLNGLTGGQKQATSLVL 1039 Query: 982 ETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVDAQ 1041 ++D+FT +QGYAGVGKTTQ +AV++A+ LP RP + GL PTH+AV EM GV AQ Sbjct: 1040 GSTDQFTGIQGYAGVGKTTQMKAVVAALETLPADARPALTGLAPTHQAVKEMSDVGVRAQ 1099 Query: 1042 TLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTD 1101 T+ SF+ + +GE PD+ + +FL+DESSM GN D A + IAAGGGRAV+ GD D Sbjct: 1100 TIKSFIVEHDQATAAGEKPDYKSQVFLIDESSMAGNQDTAALFQAIAAGGGRAVSMGDID 1159 Query: 1102 QLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTP-ELREAVYSLINRDVERALSGLESVKP 1160 Q +A+ G PF+L Q RS DVAIMKEIVRQ +LR AV+ +I+ ++ AL +E+ Sbjct: 1160 QFEAVDSGAPFKLMQERSPMDVAIMKEIVRQKDVQLRGAVHDIIDNRIDAALKRIEAQPV 1219 Query: 1161 SQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRT 1220 +V R+ A P+ + E T + IVRD+TGR+ Sbjct: 1220 DRVAREADATPPDSAFHE--------------------------TETPVDDIVRDWTGRS 1253 Query: 1221 PEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTW 1280 PEAR +TLI+T LN DR+ +N+ IH + GELG + VPVL+ E + W Sbjct: 1254 PEARARTLIITQLNADRQSVNAGIHRQLRERGELGNIAITVPVLDKITHTRHEFNKTQAW 1313 Query: 1281 ETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVG 1340 Y + + ++ +T+++ EG L SPRE + V L+ + I V Sbjct: 1314 TAGMVVKRGDR--YQDVLAVDRNGNTVTVRNEEGKIGLYSPRELITGDVQLFKRNQIEVR 1371 Query: 1341 TGDRMRFTKSDRERGYVANSVWTVTAV-SGDSVTLSDGQQTREIRPGQEQAEQHIDLAYA 1399 GD +RFT +DRE+G AN +TV +V + L + I P +A+QH+D +A Sbjct: 1372 QGDLLRFTATDREQGQTANQRFTVESVSEKGDIRLRGEKGMVTINPDSVRAQQHLDYGWA 1431 Query: 1400 ITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINN 1459 +T +GAQG S + I+LEGTE RK +A + Y++ SR K+HVQ+YTD + WT A+ Sbjct: 1432 VTGYGAQGTSTDYVISLEGTEEGRKALATRRAFYISASRAKEHVQIYTDGKADWTKAVTR 1491 Query: 1460 AVQK-GTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPARFIAP 1518 + TAHD P+ R+ A +++ + + A GRA +R G+ A+ I Sbjct: 1492 PERDIKTAHDALHPETQRQ--QARAIWAMGQPVSKTAIGRAWVRHQGMQDTSLTAKIIPA 1549 Query: 1519 GRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGEGRVKGSGDAQFVALQGSR 1578 R++P+P +ALP +D NGKSAG+ L L + L G+ R+ + A+ LQ S+ Sbjct: 1550 TRRFPEPALALPVYDNNGKSAGLALVSLVSSPEGRL--TQGDTRMVMTERARGAVLQRSQ 1607 Query: 1579 NGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPGAITGGRVWGDIPDNSVQPGAG 1638 +G + + ++ + + NP GVV + E + +TGG ++ Sbjct: 1608 SGHTHVVSDLGAALEAVKANPKDGVVWQTGEESPSSHLIKVTGGERQDAEERAAINVSRR 1667 Query: 1639 NGEPVTAEVLAQRQAEEAIRRETERRADEIV--RKMAENKPDLPDGKTEQAVREI--AGQ 1694 + V E Q+ E+A+ +TE+ ++ R E P+ +A +E + Sbjct: 1668 ETDIVLPETEKQK-PEQAMSADTEKAREQEALRRIAEETLQIKPEFTGTEASQESNEPDR 1726 Query: 1695 ERDRAAITEREAALPEGVLREPQRVREAV----REIARENLLQERLQQMERDMVRDLQ 1748 + + + A + R ++ E A + + L ERD+VR + Sbjct: 1727 STLKNIASSEDIAASDAARRHSEKAEIVQDRTPEERAGASRVVSELANSERDIVRQPE 1784 Score = 320 bits (820), Expect = 3e-85, Method: Composition-based stats. Identities = 152/327 (46%), Positives = 215/327 (65%), Gaps = 4/327 (1%) Query: 2 MSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRLP 61 MS+A V SAG A YY++ DNYY LG++ W G GA+ LGL+GSV D T +LEGRLP Sbjct: 1 MSVAPVASAGGAAGYYSNADNYYFLGNLQSLWLGEGAKALGLEGSVRGDDLTAVLEGRLP 60 Query: 62 DGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEALA 121 DG+ L + +G++ HRPG+DLTFSAPKSVS++ ++GGDK +++AHN AV A VE L Sbjct: 61 DGSRLGKEINGNHVHRPGHDLTFSAPKSVSILGLIGGDKAMVEAHNHAVRVAAGYVEKLI 120 Query: 122 STRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDKVG 181 S R DG + V T +V A F HDTSR+ +PQLHTH ++AN+T+ +G+WK L++D + Sbjct: 121 SARDTKDGVTSIVHTDKMVAAAFTHDTSRNLDPQLHTHLLIANMTEQDGKWKALATDYIH 180 Query: 182 KTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPV---EAFSGRS 238 GFIE V Q+ G++YR L++ VEALG+E E VGKHGMWE+ GVP + FS R Sbjct: 181 NAGFIETVMKMQVTLGKIYRSALRQHVEALGHEVEEVGKHGMWEIKGVPEDVRDEFSSRG 240 Query: 239 QTIREAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQR 298 + I+ A+G +A+L+SRDVAA DTR++K M W+ +K+ G+D++AY+++ R Sbjct: 241 REIQGAIGAEATLRSRDVAAKDTRQAKVDPSRLRLMDRWLNQMKDKGYDLKAYQESVVPR 300 Query: 299 -ADLRTLTPGPASQDGPDVQQAVTQAI 324 A R P + V +++ Sbjct: 301 DAGPREAAMPPERVPPAATVRTVPESL 327 >UniRef50_C8QEC8 Conjugative transfer relaxase protein TraI n=2 Tax=Pantoea sp. At-9b RepID=C8QEC8_9ENTR Length = 1938 Score = 726 bits (1872), Expect = 0.0, Method: Composition-based stats. Identities = 508/1486 (34%), Positives = 741/1486 (49%), Gaps = 67/1486 (4%) Query: 263 KSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQ 322 K + W + + FDI A +R RT PG +V AV Sbjct: 378 KPETPDGRARLHERWQRQMDSVDFDIGGVMRDAREREAART-EPGEEPPLPGEVMDAVRT 436 Query: 323 AIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTS 382 AI+ LS+ + +FTY D+L ++ + E R +D+AIS L PLD +KG+FTS Sbjct: 437 AISVLSDSRTRFTYGDLLLTAHQAGEQQHSIPE-LRRALDQAISDNLLAPLDGDKGVFTS 495 Query: 383 GIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGA 442 IH+LDELSV++L+ DI+K+NRV E A R +AI++ Sbjct: 496 HIHLLDELSVQSLAADIIKENRVANFRESPGMTPEHLKQA------QRAPVAILNAPASV 549 Query: 443 AGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPG 502 R+ V ELV M+RE GREV ++A+ + + + L L+ R + + P Sbjct: 550 QRLRDTVEELVTMSRENGREVSVLASGAERALTLGKSALLKDTLLQRSRVTEKTFSLAPQ 609 Query: 503 STVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMKDAGVNTYRWQG 562 ST+I++ EKL LKE L L A N Q+L DS R +AL + AGV Sbjct: 610 STLIIEGAEKLGLKEMLVLTGEAREKNAQLLFLDSAGRQSNTNALSVLASAGVERLSLTA 669 Query: 563 -GEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQ 621 G A + S D+ RY LA F A V+G REQ LT IR L+ Sbjct: 670 PGPGLEARVFSIQDKRDRYRALAERFTDLSGPDNTVTAAVTGAREQQQLTGYIRDALQNA 729 Query: 622 GVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSL 681 G LG V + A +PV++ ++ R L YRPGMV+E + + Y+IDRV + L Sbjct: 730 GKLGRDTVQVEARTPVFITAKERKLPVSYRPGMVLEDRSD-RQEIRHYMIDRVHDDTRML 788 Query: 682 TLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVS 741 +L D G V++S+L + W LF E++ +A GE+L + DRL V ++ Sbjct: 789 SLIDGDGVLSRVKLSTLTADWRLFTREQLSIAQGEQLFALAADRSAGLKARDRLTVTALE 848 Query: 742 EDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNAT 801 A+TV+ G+ +P + + + +G+V PG ++ TV AS++ + Sbjct: 849 NGALTVMREGQQKPLRIATDRPLY----VTHGYVSAPGARDNERGTVLASLSSRELSVNM 904 Query: 802 LNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALH 861 +N LA+SG + +++ R EK+ R + ++ +G + A+ + L Sbjct: 905 MNALAQSGTEAEIFTGEALNRAEEKMMRLRTGRSPVALVRQASGREDVSDALETLNANLL 964 Query: 862 TPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVD 921 + A++A+ A+ + + ++FS V LL A+ F L EI Q+K GDL+ V Sbjct: 965 SDAEKAVSRAVAQM--RHVSFSEVKLLEGAEDFLE---NVPALRTEIARQVKAGDLMPVK 1019 Query: 922 VAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMIL 981 V+ G VSRA++E EK+I+ I GK AV PLM + L+ LT+GQ+AAT +IL Sbjct: 1020 VS---GEPRFVSRATWEMEKAIIGEIAAGKNAVEPLMATIAPSLLTGLTAGQQAATTLIL 1076 Query: 982 ETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVDAQ 1041 ++ DRFT VQGYAG GKTTQF+AV +A+ LPES RP ++GL PTHRAV EMR G++AQ Sbjct: 1077 QSPDRFTAVQGYAGTGKTTQFKAVKAAIETLPESGRPLIIGLAPTHRAVKEMRDTGIEAQ 1136 Query: 1042 TLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTD 1101 TL SF+ D Q + +GE + NTLFL+DESSM+GN D A AY IAAG GRAV GD Sbjct: 1137 TLKSFVLDWQQRTAAGEEVRYGNTLFLIDESSMLGNQDTAAAYRAIAAGDGRAVPVGDVA 1196 Query: 1102 QLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPE-LREAVYSLINRDVERALSGLESVKP 1160 QL++ G PFRL Q RS DVA+MKEIVRQ L+ AVYS+I AL + V P Sbjct: 1197 QLESPESGAPFRLMQERSPIDVAVMKEIVRQRDANLKSAVYSVIENKAAAALEKINRVSP 1256 Query: 1161 SQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRT 1220 VPR+ G P SVTE IV DY GRT Sbjct: 1257 GTVPREAGEVVPLRSVTETGSP--------------------------VSNIVADYIGRT 1290 Query: 1221 PEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTW 1280 AREQT+IV L+EDRR +N IH + ELG++ V VPVL+ + R+ W Sbjct: 1291 KAAREQTMIVVQLHEDRRAINEGIHASMVQRKELGEKAVTVPVLDRITGGRHDFNRIGDW 1350 Query: 1281 ETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVG 1340 + + VL + Y + G + G + L+D G + SP E A + ++ I + Sbjct: 1351 KAGQV--VLANERYLTVTGADRGTGHVLLRDESGRMQYWSPAELNATEIEVFERREIELR 1408 Query: 1341 TGDRMRFTKSDRERGYVANSVWTVTAVSGD-SVTLSDGQQTREIRPGQEQAEQHIDLAYA 1399 GD +R K+ ++ G+ A+ + V + + + L + + I P A++H+D A+A Sbjct: 1409 EGDSVRLNKTQKQAGHAAHEQYRVAELRENGEIVLKNRDGEKVIDPKAVTADRHVDYAWA 1468 Query: 1400 ITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAIN- 1458 +T +GAQGAS + IALEGTEG R M+G + Y++ SR K HVQ+YTD + W + + Sbjct: 1469 VTGYGAQGASTDYVIALEGTEGARANMSGMRAFYISASRAKDHVQIYTDGLKDWLETLQG 1528 Query: 1459 NAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPARFIAP 1518 TAHD P+P+R A +++ + L A GRA LR GL G AR I P Sbjct: 1529 GKNGPATAHDALSPEPER--AQARAIWAMGQPLSKTALGRAFLRGQGLKGAPLTARIIPP 1586 Query: 1519 GRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGEGRVKGSGDAQFVALQGSR 1578 +KYP ++ALP +D NGK+AG+ L PLT + G + GE R +G AQ +Q SR Sbjct: 1587 TKKYPDAHLALPVYDGNGKTAGLTLVPLTAEAG---QPEPGEVRQLITGGAQAAIVQKSR 1643 Query: 1579 NGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPGAITGGRVWGDIPDNS-----V 1633 +GE ++ ++Q + AR+ P +GV++ + GG+ ++ V Sbjct: 1644 DGEMIIVSDLQQALAAARNKPQAGVLLLTGRHPPSAQLLKVAGGQPGRGWRPDATLLRLV 1703 Query: 1634 QPGAGNGEPVTAEVLAQRQAEEAIRRETERRADEIVRKMAENKPDLPDGKTEQAVREIAG 1693 Q G +E A E ++ +N P P + Q Sbjct: 1704 QAELREGLRDLPPDAP--VPDERAALRAALDALEKGQETGQNVPSAPGRDSAQ--ENSRD 1759 Query: 1694 QERDRAAITEREAALPEGVLREPQRVREAVREIARENLLQERLQQM 1739 +TE A P V +R R + + +++ QQ+ Sbjct: 1760 VRAIAQQLTEGAMASPGTVPVVTERDRAQLSALLAMRVVEAMKQQL 1805 >UniRef50_B0RKM2 Mobilization protein TraI n=3 Tax=Yersinia RepID=B0RKM2_YEREN Length = 1656 Score = 714 bits (1842), Expect = 0.0, Method: Composition-based stats. Identities = 302/1711 (17%), Positives = 568/1711 (33%), Gaps = 223/1711 (13%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVL--GSMGERWAGRGAEQLGLQGSVDKDVFTRLLEG 58 M+S+ ++ + AGNYY D+YY G + W G+GAE+LGL G+VD D F LLEG Sbjct: 1 MLSLKKIGNVKEAGNYYLSHDSYYNKDTGEVHSEWGGKGAEELGLSGAVDTDRFIELLEG 60 Query: 59 RLPDGADLSRMQ-DGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQV 117 ++ L R + +G H PG+D TFSAPK S++A++G DKRLI AH ++V A++ + Sbjct: 61 KIKADIQLGRTKVNGDLEHVPGWDFTFSAPKGASILALVGDDKRLIQAHQESVIEAMKFL 120 Query: 118 EA-LASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLS 176 E A+TR DG++ NL+ A F H SR +PQLHTH V N L Sbjct: 121 EKNYAATRTYKDGKTHLEKVDNLLYASFIHTESRSHDPQLHTHNPVINAV--------LD 172 Query: 177 SDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKH-GMWEMPGVP---VE 232 S+ K+ +Y ++ G +YR + LGYE EV + G +++ G+P Sbjct: 173 SEGKWKSLEPVEMYRAKMMAGLVYRSSYASKARGLGYEIEVTDREKGFFDIKGIPDPLKG 232 Query: 233 AFSGRSQTIREAVGEDASLKSR--DVAALDTRKSKQHVDPEIKMA--------------- 275 +FS R Q I+ A+ + + + A L TR K + E + Sbjct: 233 SFSKRRQQIQAAINQRGLFDQKSIEKATLFTRDKKTSIAQEERNEIWKTTVTESGFDIDL 292 Query: 276 ----------EWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQA------ 319 + + D A + T + + Sbjct: 293 FISNAKEQQIQQQNRGERDIHDNNGIESPAPESKTESTSKTKERPEAKESFYENHKEQSE 352 Query: 320 -----------------------------------VTQAIAGLSERKVQFTYTDVLARTV 344 V A L+E + F+Y +L + Sbjct: 353 AFAEKGDTTDFLSQQEHIHLEESRHFDYDSQSLNDVRLAYKVLAENESVFSYKALLKEAM 412 Query: 345 GI-LPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQN 403 + L EN ID I +LIP K FT+ + E + + Sbjct: 413 KLRLGLENSSKADIDLDIDRLIDVGELIP---RKTGFTTKEALSRERFIVTTMLNGKDTY 469 Query: 404 RVTVHPE------------------KSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQ 445 + + + + A+ + + ++ + G G G+ Sbjct: 470 QAIGDLKGVKTHIDAFEQRQTELLGQKFTFSDDQRQAIQDMLLSKDLVSGIQGYAG-TGK 528 Query: 446 RERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGSTV 505 ++ ++ A QG ++ +A + + +D + + + + Sbjct: 529 TTLLSCVIEYATNQGYIIKGLAPTGSAVETLHKDTGIVTSTVDSYLFTRKPEDIESKQII 588 Query: 506 IVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTG---TGSALMAMKDAG-----VNT 557 +VD+G L+ K LL A ++ + + G + M+ G V T Sbjct: 589 LVDEGSLLNAKHVQDLLIAAKNSGAKLFLLGDKDQHAAVEAGKPFIIMQAFGMQVASVKT 648 Query: 558 YRWQGGEQRPATIISE-----------------PDRNVRYARLAGDFAASVKAGEESVAQ 600 Q E+ + D N + + + +++ Sbjct: 649 IIRQKNEELLNAVKDAINNNFSESLNWMGKNVDVDENPLGKMATEWLSLTSEERGKTLVI 708 Query: 601 VSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWN 660 + + + IR EL+ +GV+ E++ L ++ Y+ ++E Sbjct: 709 IPENKTRRKYNSTIRRELQEEGVVSKDEISTRVLLNSRMNHAKMRDTRYYKTEHLIEFQK 768 Query: 661 PET-RSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWS----LFRPEKMPVADG 715 Y I + LT+ + V R LD +F E + ++ G Sbjct: 769 ETQGIKPGFYKITLFNHLDNELTISSDNKDVHVFRPGELDEKDRYQLDVFEEENLKISKG 828 Query: 716 ERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWV 775 ++L+ T GL + GD L+V S T + + + + Sbjct: 829 DKLQWTKSRKGLGLKNGDMLEVISTDSSKGTYQAIRENDGQIFELDANQRLNVDYSYSLT 888 Query: 776 ETPGHSVSDSAT---VFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPS 832 + + AS ++ + + ++R+ ++++ + Sbjct: 889 SYKAQGKTCDRVYALLVASKNKLVNNKSFYVSISRAKHIAKIFTDNKAKLLDAINKKDSD 948 Query: 833 FTVVSEQIKTRAGETSLETAISHQKSALH-TPAQQAIHLALPVVESKKLAFSMVDLLTEA 891 T E T + + K A + A + +K+ FS DLL EA Sbjct: 949 KTTALEGFSTGQMKREANDEKNIPKDNRKLHQAIMEVKTASEKLSAKQAVFSHTDLLKEA 1008 Query: 892 KSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYG--TGLLVSRASYEAEKSILRHILE 949 + ++ I + G+L + K SR + E+ ++ H+ + Sbjct: 1009 MKWTLGIYDANDISDAIAHLRQEGNLALSSIQKKGEGSEHYYTSRNNVLIERELVVHLQQ 1068 Query: 950 GKEA-------------VMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGV 996 GK V ER E + + A I + D +V G Sbjct: 1069 GKGRLAKLAPKGVIKSYVDSRNERALSEDIMPINESSLFALETIFNSKDEGILVLGSDNT 1128 Query: 997 GKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVD-AQTLASFLHDTQLQQR 1055 G R V + E + +V + V +M+ G+ A ++ S + + Sbjct: 1129 GHKNLLRTVG---KSIAEHQEYKVHAFSTNNTGVKQMKDDGMKNAMSIFSHMDRIEASIA 1185 Query: 1056 SGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQ 1115 GE L+ ++ S +G + R L G R + D ++ A++ G L Sbjct: 1186 KGEPLKGRRQLWYVENISTLGAEETLRLQRLARFSGARLIMVADKNEN-ALSWGAVPALL 1244 Query: 1116 QTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHS 1175 V ++ PE+ +A +L+ +E +LS L Sbjct: 1245 NHHGMHTVNFNATVMAHNPEINKASDALVKGRIEESLSAL-------------------- 1284 Query: 1176 VTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNE 1235 + + + + + + Y + E R QT I+ + Sbjct: 1285 --------------SPMVHEVDSQIKAEAKIARIGVVKDTYLNLSTEERAQTAIILPDHH 1330 Query: 1236 DRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRD------ALVL 1289 R +NSMI + + L V + E + ++ Sbjct: 1331 TRHAVNSMIREGLKAEKSLAYNGTETTVYRQVTLDPFEKKEARFYKVGMVLESESTTQNG 1390 Query: 1290 VDNVYHRIAGISKDDGLITLQDAEGNTRL----ISPREAVAEGVTLYTPDTIRVGTGDRM 1345 I + K + ++ ++ L + G Y + + G+R+ Sbjct: 1391 TKGDKFTIVDVDKKNNILEIKSLAEGKILSIKTKDIPTSKGNGFISYAVENREIVKGERI 1450 Query: 1346 RFTK---------SDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDL 1396 R T+ +D+ N+ V ++ + L + Q +H + Sbjct: 1451 RLTRAFPLPKKKQTDKGGYLPKNTEAIVKDINVSTGDLILTLNNGQQITLNAQQWKHYEW 1510 Query: 1397 AYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDA 1456 Y + Q + + E +K A + + LSR ++ V TDN++ D Sbjct: 1511 GYTYNHY--QVKDSAYKQVITIMESWKKNFATQNALHNTLSRSTHNLIVITDNKEKLFDT 1568 Query: 1457 I-NNAVQKGTAHDVFE-PKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPAR 1514 + N + A D + ++ N + L+ ++ + + LA + ++ Sbjct: 1569 LRANTGFQKMALDNKKVSVTQADIKNFDELWGK-----SLSPFEKRITRLELAVSKAVSK 1623 Query: 1515 FIAPGRKYPQPYVALPAFDRNGKSAGIWLNP 1545 F+ K P ++ + Sbjct: 1624 FVEVTAKKEIKTPEFPNKNQQPEKNRPTKQR 1654 >UniRef50_B2JAG8 ATP-dependent exoDNAse (Exonuclease V) alpha subunit-helicase superfamily I member-like protein n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2JAG8_NOSP7 Length = 2142 Score = 557 bits (1434), Expect = e-156, Method: Composition-based stats. Identities = 207/868 (23%), Positives = 349/868 (40%), Gaps = 85/868 (9%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVD-KDVFTRLLEGR 59 M++ A V S+ A NY+ NYY G W+G+GA +LGL G++D ++ F ++ GR Sbjct: 1 MLTAANV-SSEMAVNYFVK--NYYHQGK--SLWSGQGALKLGLSGAIDDEEAFKNVISGR 55 Query: 60 LPDGADLSRMQD-GSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVE 118 P G + + + R D TFSAPKSVS+MA++GGD RLIDAH+QA+ + +E Sbjct: 56 SPQGREQLNARALKPDERRAALDCTFSAPKSVSLMALVGGDTRLIDAHHQALKETLELIE 115 Query: 119 -ALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ-HNGEWKTLS 176 A TRV + V TGNLV+A F+H SRD +P LHTH ++ N+TQ +G W +L Sbjct: 116 QRYAYTRVTDNSGRHRVKTGNLVVAQFDHIESRDLDPHLHTHCLLMNMTQTPDGRWLSLG 175 Query: 177 SDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGV---PVEA 233 ++ ++AN+ G Y+ L +V+ LGYE E KHG +++ G +EA Sbjct: 176 NN---------EIFANKKFLGMAYQSSLAREVQKLGYEIEK-SKHGQFDIKGFKFEDLEA 225 Query: 234 FSGRSQTIREAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRD 293 FS R Q I + +++ R+ +TR+ KQ + +A W + G + Sbjct: 226 FSKRRQQIIASFSANSTWAEREKIWDNTRQRKQKLPESELLAFWKEEAAALGI---RFVK 282 Query: 294 AADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGV 353 A + R ++ + + + + AIA SER V F D+ + E + Sbjct: 283 AGEPRQEIPA--------NEKSLAEVLDLAIAHCSERNVAFRQEDLEKFIL-----EERL 329 Query: 354 IERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIM------KQNRVTV 407 A ++LI L FT+ V EL+ L + Q V Sbjct: 330 ATDIAATAALIREHQELIALPGLTDQFTTMTAVRRELATIDLMQQGQYKFCSISQREVVE 389 Query: 408 HPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIA 467 ++ G AV + A G G AG+ + EL +A G ++ A Sbjct: 390 SHLENTLLNTGQRQAVELAATTSDQFIAWQGVAG-AGKTFALKELKAIAFNAGYTIKGFA 448 Query: 468 ADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAAR 527 + + ++ + E I + E P +VD+ LS K+ LL A Sbjct: 449 PSSSAAKVLSEELEIQSETIARLL-VTEPKEIEPNQIWVVDEAGLLSAKDAHALLQRATL 507 Query: 528 HNVQVLITDSGQRTG---TGSALMAMKDAGVNTYR-----WQGGEQRPATIISEPDRNV- 578 +V++ ++ G+ +++ AG+ T Q Q + D + Sbjct: 508 LQARVILVGDTRQLSAVEAGNPFKSLQQAGIKTAHLNESLRQKNPQLKLAVNLIADGRIE 567 Query: 579 -------------------RYARLAGDFAASVKAGEESVAQVSGVR-EQAILTQAIRSEL 618 + ++A D+ ++G E+ LTQAIR +L Sbjct: 568 AGFERLEANGSILQVDSFSKIEQIANDYIVGTPEQRLKTLVLAGTNTERLALTQAIRDKL 627 Query: 619 KTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSH--DRYVIDRVTA 676 K +G LG T+T L L + G V+ R + + V Sbjct: 628 KGEGTLGETA-TITQLQTKNLTKVQMRFAHNFEIGDVIMPTRDYKRRGLSKGKLYEVVGR 686 Query: 677 QSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQ 736 + LTLR G+ V ++++ ++ +A G+RL+ L G Sbjct: 687 TTDKLTLRSDDGQHLEV---DTAFDKAVYQRHQIEIAVGDRLQWKKNDRQLGRRNGQEFT 743 Query: 737 VASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMA 796 V + + +V A+ T +S + L + + ++ Sbjct: 744 VTGID---LNIVHIKYADERTERISLAQTQNLDYALVSTTYSSQGKTADQVLISADF-TI 799 Query: 797 MDNATLNGLARSGRDVRLYSSLDETRTA 824 + +R+ ++++Y+ Sbjct: 800 GQESFYVAASRARHELKIYTEDPTRLVE 827 Score = 328 bits (841), Expect = 1e-87, Method: Composition-based stats. Identities = 144/826 (17%), Positives = 272/826 (32%), Gaps = 92/826 (11%) Query: 674 VTAQSHSL--TLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLR--- 728 + A +L TL + R++ + + + VA + + P L Sbjct: 100 IDAHHQALKETLELIEQRYAYTRVTDNSGRHRV-KTGNLVVAQFDHIESRDLDPHLHTHC 158 Query: 729 -VSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSAT 787 + + + + S KL ++ Sbjct: 159 LLMNMTQTPDGRWLSLGNNEIFANKKFLGMAYQSSLAREVQKLGYEIEKSKHGQFDIKGF 218 Query: 788 VFASVTQMAMDNATLNGL--ARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAG 845 F + + + A S R + + +KL E+ Sbjct: 219 KFEDLEAFSKRRQQIIASFSANSTWAEREKIWDNTRQRKQKLPESELLAFWKEEAAALGI 278 Query: 846 ETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELG 905 + A + + LA+ + +AF DL + F E T++ Sbjct: 279 RFVKAGEPRQEIPANEKSLAEVLDLAIAHCSERNVAFRQEDL----EKFILEERLATDIA 334 Query: 906 GEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGEL 965 + +L+ + T + + E + + + +G+ + +R E Sbjct: 335 ATAALIREHQELIALPGL----TDQFTTMTAVRRELATIDLMQQGQYKFCSISQREVVES 390 Query: 966 MEK---LTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVG 1022 + L +GQR A + TSD+F QG AG GKT + + + + + G Sbjct: 391 HLENTLLNTGQRQAVELAATTSDQFIAWQGVAGAGKTFALKE----LKAIAFNAGYTIKG 446 Query: 1023 LGPTHRAVGEMRSAG-VDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMA 1081 P+ A + + ++T+A L + N ++++DE+ ++ D Sbjct: 447 FAPSSSAAKVLSEELEIQSETIARLLVTEPKEIE-------PNQIWVVDEAGLLSAKDAH 499 Query: 1082 RAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQ-TPELREAV 1140 R + GDT QL A+ G PF+ Q + A + E +RQ P+L+ AV Sbjct: 500 ALLQRATLLQARVILVGDTRQLSAVEAGNPFKSLQQ-AGIKTAHLNESLRQKNPQLKLAV 558 Query: 1141 YSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEA 1200 + + +E LE+ Sbjct: 559 NLIADGRIEAGFERLEANGSILQVDSFSK------------------------------- 587 Query: 1201 FPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVM 1260 E I DY TPE R +TL++ N +R L I D + G LG E Sbjct: 588 --------IEQIANDYIVGTPEQRLKTLVLAGTNTERLALTQAIRDKLKGEGTLG-ETAT 638 Query: 1261 VPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHR------IAGISKDDGLITLQDAEG 1314 + L T N+ ++R +E + D + + +TL+ +G Sbjct: 639 ITQLQTKNLTKVQMRFAHNFEIGDVIMPTRDYKRRGLSKGKLYEVVGRTTDKLTLRSDDG 698 Query: 1315 NTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTL 1374 A +Y I + GDR+++ K+DR+ G +TVT + + V + Sbjct: 699 QH----LEVDTAFDKAVYQRHQIEIAVGDRLQWKKNDRQLGRRNGQEFTVTGIDLNIVHI 754 Query: 1375 SDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYV 1434 + E Q++D A T + +QG + + + G ES YV Sbjct: 755 KYADERTERI--SLAQTQNLDYALVSTTYSSQGKTADQVLI------SADFTIGQESFYV 806 Query: 1435 ALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMN 1480 A SR + +++YT++ + + K A ++ + + + Sbjct: 807 AASRARHELKIYTEDPTRLVELAQQSKAKDNALELLRKQIQKSTIE 852 >UniRef50_B1X3A0 Putative TrwC/TraI protein n=2 Tax=Cyanothece RepID=B1X3A0_CYAA5 Length = 1264 Score = 549 bits (1415), Expect = e-154, Method: Composition-based stats. Identities = 211/898 (23%), Positives = 352/898 (39%), Gaps = 115/898 (12%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSV-DKDVFTRLLEGR 59 M++I V +A A Y+ YY RW G GA L L G + + D + LL+G+ Sbjct: 1 MLTIKNV-NAELAKTYFEK--GYYEE----GRWFGEGAANLNLTGEIKNHDAYNNLLDGQ 53 Query: 60 LPDGAD-LSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVE 118 PDG L + N+HR D TF+APKSVS+ A++GGD+RLI+AH +AV+ + +E Sbjct: 54 SPDGNHCLMGRKIKGNQHRAAIDCTFNAPKSVSLQALVGGDERLIEAHRKAVNQTLALME 113 Query: 119 -ALASTRVMTDGQ-SETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ-HNGEWKTL 175 A +R++ GQ + V TG L +A F+H +R+ +P LHTH VV NVTQ +G+W++L Sbjct: 114 SRYAQSRILKKGQPRQVVQTGKLAVAQFDHIETRNLDPHLHTHCVVMNVTQRDDGQWRSL 173 Query: 176 SSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGV---PVE 232 +D +Y Q G +Y+ L ++ LGY+ E +HG +E+ G +E Sbjct: 174 HND---------AIYRQQKLLGMVYQHNLALELRKLGYQVEA-KQHGQFEIAGYEKKDLE 223 Query: 233 AFSGRSQTIREAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDI---- 288 FS R Q I GE+AS+ R++A +TR K+ V P +W + E G Sbjct: 224 FFSKRRQQILAEAGENASVVERNIAWGNTRVKKEVVSPSELKQKWQREASELGVKFVNPN 283 Query: 289 --------------------------------RAYRDAADQRADLRTLTPGPASQDGPDV 316 +D +A+ + SQ P Sbjct: 284 TGLDKKGEGLGEQREQREQRKQREQREQREQREQRSRGSDYQANQGNIDQNAISQPSPIK 343 Query: 317 QQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPL-DR 375 V AIA ER V F +V + L + I+ I + QLI + D Sbjct: 344 ANIVNDAIAHCEERAVAFRLEEVEKFIL--LNGQPINIKNLDKTIGQ---HSQLINVSDN 398 Query: 376 EKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEK------SVPRTAGYSDAVSVLAQD 429 +T+ + EL+ L + + R K + T G +A++ Sbjct: 399 LNRRYTTEAALQRELATIRLMLEGKNKERPICSEAKINQGLAPISLTEGQQEAITTALSS 458 Query: 430 RPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITG 489 R ++ G G AG+ + ++++ G V+ A + + + + + + Sbjct: 459 RDTVMAWQGVAG-AGKTYALNHFTTLSQKNGYSVKGFAPSAEAAKVLGFEVGIKADTVAS 517 Query: 490 RRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTG---TGSA 546 + P IVD+ LS K LL A N +VL+ ++ G+ Sbjct: 518 LLYSKQAKQVEPNQIWIVDEAGLLSAKAAYELLKRAKAENARVLLVGDTRQLSAVEAGNP 577 Query: 547 LMAMKDAGVNTYR-----WQGGEQRPATIISEP--------------------DRNVRYA 581 +++ AG+ T R Q + + + Sbjct: 578 FKSLQAAGMTTARMNQSLRQRTPELQTAVDFISKGEIDAGFGILNQANCLIEVAEEEKIN 637 Query: 582 RLAGDFAASVKAGEESVAQVS-GVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLD 640 ++ D+ +A E ++ E+ +TQ IR LK +G LG V +T L L Sbjct: 638 QIVNDYLKIPEADREKTLILAGTNAERLAITQTIRQGLKEEGKLG-EGVKLTQLKSKDLT 696 Query: 641 SRSRYLRDMYRPGMVME--QWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSL 698 G ++ + + + + + SLTL+D+ G V Sbjct: 697 RVQMRFTHHLEIGDLVSPAFNYKQRQLSKGELYEIIDKDVDSLTLKDSTGNRVKVDPLFE 756 Query: 699 DSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATL 758 + ++ ++ +A G+RL+ T G V ++ T+ + Sbjct: 757 KA---VYGSSEIEIAVGDRLKWTKNDRKQGRRNGQEFTVKAIEGTIATIEYKDGQQD--- 810 Query: 759 PVSDSPFTALKLENGWVETPGHSVSDSAT-VFASVTQMAMDNATLNGLARSGRDVRLY 815 S + L+ G V T S +A V S + ++R D++LY Sbjct: 811 --SFNFSVPQHLDYGLVSTTYSSQGKTADQVLISADYTVGKESFYVAVSRVKSDLKLY 866 Score = 317 bits (811), Expect = 3e-84, Method: Composition-based stats. Identities = 153/858 (17%), Positives = 278/858 (32%), Gaps = 85/858 (9%) Query: 632 TALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQ--SHSLTLRDAQGE 689 L+ + + +P V++ D + +H + + Q + Sbjct: 107 QTLALMESRYAQSRILKKGQPRQVVQTGKLAVAQFDHIETRNLDPHLHTHCVVMNVTQRD 166 Query: 690 TQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVV 749 R D+ + + M L + + + ++A + + Sbjct: 167 DGQWRSLHNDAIYRQQKLLGMVYQHNLALELRKLGYQVEAKQHGQFEIAGYEKKDLEFFS 226 Query: 750 PGRAEPATLPVSDSPFTALKLENGWV-ETPGHSVSDSATVFASVTQMAMDNATLNGLARS 808 R + ++ + G + +N Sbjct: 227 KRRQQILAEAGENASVVERNIAWGNTRVKKEVVSPSELKQKWQREASELGVKFVNPNTGL 286 Query: 809 GRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISH-QKSALHTPAQQA 867 + E R K EQ + + + I S Sbjct: 287 DKKGEGLGEQREQREQRKQREQREQREQREQRSRGSDYQANQGNIDQNAISQPSPIKANI 346 Query: 868 IHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYG 927 ++ A+ E + +AF + ++ + L I G + Sbjct: 347 VNDAIAHCEERAVAFRLEEVEKFIL-LNGQPINIKNLDKTI------GQHSQLINVSDNL 399 Query: 928 TGLLVSRASYEAEKSILRHILEGKEAVMPLMERV---PGELMEKLTSGQRAATRMILETS 984 + A+ + E + +R +LEGK P+ G LT GQ+ A L + Sbjct: 400 NRRYTTEAALQRELATIRLMLEGKNKERPICSEAKINQGLAPISLTEGQQEAITTALSSR 459 Query: 985 DRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMR-SAGVDAQTL 1043 D QG AG GKT L + V G P+ A + G+ A T+ Sbjct: 460 DTVMAWQGVAGAGKTYALNH----FTTLSQKNGYSVKGFAPSAEAAKVLGFEVGIKADTV 515 Query: 1044 ASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQL 1103 AS L+ Q +Q N ++++DE+ ++ A R + GDT QL Sbjct: 516 ASLLYSKQAKQVE------PNQIWIVDEAGLLSAKAAYELLKRAKAENARVLLVGDTRQL 569 Query: 1104 QAIAPGQPFRLQQTRSAADVAIMKEIVRQT-PELREAVYSLINRDVERALSGLESVKPSQ 1162 A+ G PF+ Q + A M + +RQ PEL+ AV + +++ L Sbjct: 570 SAVEAGNPFKSLQA-AGMTTARMNQSLRQRTPELQTAVDFISKGEIDAGFGILNQANCLI 628 Query: 1163 VPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPE 1222 +E IV DY Sbjct: 629 EVAEE---------------------------------------EKINQIVNDYLKIPEA 649 Query: 1223 AREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWET 1282 RE+TLI+ N +R + I ++ G+LG E V + L + ++ ++R E Sbjct: 650 DREKTLILAGTNAERLAITQTIRQGLKEEGKLG-EGVKLTQLKSKDLTRVQMRFTHHLEI 708 Query: 1283 HRDALVLVDNVYHR------IAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDT 1336 + + I KD +TL+D+ GN + P +Y Sbjct: 709 GDLVSPAFNYKQRQLSKGELYEIIDKDVDSLTLKDSTGNRVKVDPLFEK----AVYGSSE 764 Query: 1337 IRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDL 1396 I + GDR+++TK+DR++G +TV A+ G T+ ++ QH+D Sbjct: 765 IEIAVGDRLKWTKNDRKQGRRNGQEFTVKAIEGTIATIEYKDGQQDSFNFSVP--QHLDY 822 Query: 1397 AYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDA 1456 T + +QG + + + G ES YVA+SR+K +++YT ++ D Sbjct: 823 GLVSTTYSSQGKTADQVLI------SADYTVGKESFYVAVSRVKSDLKLYTLDKDNLLDL 876 Query: 1457 INNAVQKGTAHDVFEPKP 1474 + K ++ + Sbjct: 877 AKASRAKKNPLELLRARQ 894 >UniRef50_Q5ZTT4 TraI n=1 Tax=Legionella pneumophila subsp. pneumophila str. Philadelphia 1 RepID=Q5ZTT4_LEGPH Length = 1981 Score = 546 bits (1406), Expect = e-153, Method: Composition-based stats. Identities = 206/1085 (18%), Positives = 399/1085 (36%), Gaps = 100/1085 (9%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGS-VDKDVFTRLLEGR 59 M+S+ + SA A YY D NYY S RW G GA+ LG+ G V+K+ LL+G Sbjct: 1 MLSLQPLDSADGAAAYYLDVVNYYENDSKSVRWLGDGAKILGIHGQAVEKEQMIALLKGI 60 Query: 60 LPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEA 119 LPDG L R+ HRPG+D+T +APKS S++ G D RL + ++AV++ V ++E Sbjct: 61 LPDGTQLGRIDKDGIHHRPGFDMTLTAPKSFSILLESGADPRLGEVFDKAVEWFVEEMEK 120 Query: 120 L-ASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVT-QHNGEWKTLSS 177 A R + DG+ E + T NLV+A F +SR +P HTH VV N+T +G+W++L+S Sbjct: 121 EFAQARQLVDGKIEYIDTRNLVIAAFRQPSSRANDPNSHTHLVVQNMTHCPDGKWRSLAS 180 Query: 178 DKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVE---AF 234 D G+ G +E + + I G +R KL + LGY+ G G+WE+ G P + F Sbjct: 181 DMDGQKGVVEQIMKHHIYGGLKFRNKLANLTKELGYQLASDG-DGLWEIQGAPEQVLTHF 239 Query: 235 SGRSQTIREAVGEDA--SLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYR 292 S R ++I + E K+ +AA T+ K+ +D E + ++ +E GFD Sbjct: 240 SKRRESIEALLDEKGWSGAKASSIAAQKTKLDKEIIDYEKWKEDIIKECQEMGFDPHQLV 299 Query: 293 DAADQRADLRTLTP---------GPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLART 343 ++ + T G + + +++V AI +S++ F ++ Sbjct: 300 ASSYKPQKNLFQTLKENIVERFYGKDNIEMTHARESVYVAIESISQQHAVFEERELKKEA 359 Query: 344 VGILPPENGVIER--ARAGIDEAISREQLIPLDR---EKGLFTSGIHVLDELSVRALSRD 398 + + N +I+ IDE I+ + L +K L T+ + E + Sbjct: 360 LKYVIASNKIIDETLINKAIDENIANQNLYTARHPFTQKPLLTTPWQLTLESEAIQRIEN 419 Query: 399 IMKQNRVT------------VHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQR 446 E + + A++ + G G G+ Sbjct: 420 GKGAVSAICSKQKVSEFIKAKEQEMAFALSPSQKKAMTTFLTSTDRFIAIQGYAG-TGKT 478 Query: 447 ERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQ-LLEGMAFTPGSTV 505 + +A QG E++ I A + ++ L+ L + Sbjct: 479 TMLRLTRELASLQGYEIRGITAGSAAANELRHKGGLNASTFARELGRLQNQKQDLSKTIF 538 Query: 506 IVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRT---GTGSALMAMKDAGVNTYRWQG 562 +VD+ LS + ++ A + N Q+ I + +G ++D G+ T Sbjct: 539 VVDEASMLSNPQGHKIIKLAEQFNTQLKIIGDKAQLPSPSSGKLFSVIQDYGIKTVAMTD 598 Query: 563 GEQRPATIISEPDRNV-----------------------RYARLAGDFAASVKAGEESVA 599 ++ + + E + R ++ + + ++ Sbjct: 599 NLRQKDSELRESAIHAGRGEIYDAVDKLTHVETLDTYLKRVDYISSKWLSLTPEERQNTL 658 Query: 600 -QVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQ 658 R + +TQ +R+ L +G L E L L Y ++ Sbjct: 659 CFAPTHRNRQDITQILRNALIQEGTLTGQEHLQPILKERNLTGIKLRNAAYYSQNDIIRF 718 Query: 659 WNPETR----SHDRYVIDRV---TAQSHSLTLRDAQGETQVVRIS----------SLDSS 701 + R + D + +V +++L L+ G+ ++S L+ Sbjct: 719 NHTIQRYNIKAGDYLTVGQVTNKNKHNNTLILKHENGQAIKFKLSSLPEFRTENKDLERP 778 Query: 702 WSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVS 761 ++R E++ + G++++ + + + ++ + +T++ TL + Sbjct: 779 VEVYRREQLSLMAGDQIQWKRNSEHNGIRNSELATIRQINNEGITIITEDNQ---TLHLP 835 Query: 762 DSPFTALKLENGWV----ETPGHSVSDSATVFASVTQMAMD-NATLNGLARSGRDVRLYS 816 L++G+V T G + S + A R ++ + + Sbjct: 836 HGAKELRHLDHGYVLTTYATQGKDKKRGLGLIESQNRFASTIQNYYVETTRGIWEMIVVT 895 Query: 817 SLDETRTAEKLARHPSFTVVSEQIK------TRAGETSLETAISHQKSALHTPAQQAIHL 870 + + + + A + +I Q + +++ Sbjct: 896 DDKDHLVKAITTNNSDKYSSMDMVDSDTLKAHEARFKEHKNSIVLQNAIEKKLSKEQDWK 955 Query: 871 ALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGL 930 L + +A A +L ++ G Y A + T Sbjct: 956 GLEQTVETYVQCKQQGEDRKAAKLAFAIVNDPKLYRLAKERLGFGVSTYRREALRFQTSK 1015 Query: 931 LVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSG---Q-RAATRMILETSDR 986 L + ++E+ + + +++R + L +G Q + A + + Sbjct: 1016 L-LHSLPKSERQDFSTVRQYVFLNQQILKRSQHINAQSLDNGISNQNKQALQQQSAKRNA 1074 Query: 987 FTVVQ 991 V Sbjct: 1075 VAFVI 1079 Score = 311 bits (797), Expect = 1e-82, Method: Composition-based stats. Identities = 123/684 (17%), Positives = 249/684 (36%), Gaps = 90/684 (13%) Query: 864 AQQAIHLALPVVESKKLAFSMVDLLTEAKSF---AAEGTGFTELGGEINAQIKRGDLLYV 920 A++++++A+ + + F +L EA + + + T + I+ I +L Sbjct: 332 ARESVYVAIESISQQHAVFEERELKKEALKYVIASNKIIDETLINKAIDENIANQNLYTA 391 Query: 921 DVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMP---------LMERVPGELMEKLTS 971 LL + E ++ I GK AV ++ E+ L+ Sbjct: 392 R-HPFTQKPLLTTPWQLTLESEAIQRIENGKGAVSAICSKQKVSEFIKAKEQEMAFALSP 450 Query: 972 GQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVG 1031 Q+ A L ++DRF +QGYAG GKTT R L + + G+ A Sbjct: 451 SQKKAMTTFLTSTDRFIAIQGYAGTGKTTMLR----LTRELASLQGYEIRGITAGSAAAN 506 Query: 1032 EMRSAG-VDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAG 1090 E+R G ++A T A L + D S T+F++DE+SM+ N + L Sbjct: 507 ELRHKGGLNASTFARELGRL-----QNQKQDLSKTIFVVDEASMLSNPQGHKIIKLAEQF 561 Query: 1091 GGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTP-ELREAVYSLINRDVE 1149 + GD QL + + G+ F + Q M + +RQ ELRE+ ++ Sbjct: 562 NTQLKIIGDKAQLPSPSSGKLFSVIQDY-GIKTVAMTDNLRQKDSELRESAIHAGRGEIY 620 Query: 1150 RALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLY 1209 A+ L V+ D + Sbjct: 621 DAVDKLTHVETL-----------------------------------------DTYLKRV 639 Query: 1210 EAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANI 1269 + I + TPE R+ TL + +R+ + ++ + + G L ++ + P+L N+ Sbjct: 640 DYISSKWLSLTPEERQNTLCFAPTHRNRQDITQILRNALIQEGTLTGQEHLQPILKERNL 699 Query: 1270 RDGELRRLSTWETHR--------DALVLVDNVY---HRIAGISKDDGLITLQDAEGNTRL 1318 +LR + + + + Y ++ +K + + L+ G Sbjct: 700 TGIKLRNAAYYSQNDIIRFNHTIQRYNIKAGDYLTVGQVTNKNKHNNTLILKHENGQAIK 759 Query: 1319 ISP---------REAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSG 1369 + + V +Y + + + GD++++ ++ G + + T+ ++ Sbjct: 760 FKLSSLPEFRTENKDLERPVEVYRREQLSLMAGDQIQWKRNSEHNGIRNSELATIRQINN 819 Query: 1370 DSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGF 1429 + +T+ P + +H+D Y +T + QG + + L E + + Sbjct: 820 EGITIITEDNQTLHLPHGAKELRHLDHGYVLTTYATQGKDKKRGLGLI--ESQNRFASTI 877 Query: 1430 ESAYVALSRMKQHVQVYTDNRQGWTDAI-NNAVQKGTAHDVFEPKPDREVMNAERLFSTA 1488 ++ YV +R + V TD++ AI N K ++ D+ + + A Sbjct: 878 QNYYVETTRGIWEMIVVTDDKDHLVKAITTNNSDKYSSMDMVDSDT-LKAHEARFKEHKN 936 Query: 1489 RELRDVAAGRAVLRQAGLAGGDSP 1512 + A + + ++ G + Sbjct: 937 SIVLQNAIEKKLSKEQDWKGLEQT 960 >UniRef50_Q8YK83 Alr8034 protein n=2 Tax=Nostoc RepID=Q8YK83_ANASP Length = 1499 Score = 528 bits (1359), Expect = e-148, Method: Composition-based stats. Identities = 208/900 (23%), Positives = 358/900 (39%), Gaps = 108/900 (12%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVD-KDVFTRLLEGR 59 M++ + A +Y+ + YY G RW+G+GA++LGL G+VD ++ F+ ++ GR Sbjct: 1 MLT-GKNTEPQQAVHYFM--EGYYQEG--TSRWSGKGAKKLGLSGAVDHQETFSNIVNGR 55 Query: 60 LPDG-ADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQV- 117 PDG +L + S++ R D TFSAPKSVS+ A++GGD+RLI AH AV ++ + Sbjct: 56 SPDGSQNLCARKLDSSQRRAATDFTFSAPKSVSLQALVGGDERLITAHQLAVQKTIKLIE 115 Query: 118 EALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ-HNGE----- 171 E + TR T+ E + T NLV+A F+H +R+ +P LHTHA+V N+T G+ Sbjct: 116 ERYSYTRATTEKGQELLPTNNLVIAEFDHIETRELDPHLHTHALVMNMTYLEQGKRGVQG 175 Query: 172 --------------WKTLSSDKV------------GKTGFIENVYANQIAFGRLYREKLK 205 WK S + F + ++ N+ G +Y+ L Sbjct: 176 KQGEKKKAEEDEEDWKNFLSSPASPTSPASPAHGSWYSLFNDEIFKNKKFLGMVYQNYLA 235 Query: 206 EQVEALGYETEVVGKHGMWEMPGV---PVEAFSGRSQTIREAVGEDASLKSRDVAALDTR 262 +V+ LGYE + HG +E+ G + FS R Q I A GE+A+ R+ A TR Sbjct: 236 LEVQKLGYEVKARE-HGQFEIKGFRDEDLREFSKRRQQILSAAGENATWAEREAAWTATR 294 Query: 263 KSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQ 322 KQ ++P +W + G ++ + P Q + + Sbjct: 295 NIKQKINPTELKVKWREEAAALGVKF------------VQPIEAQPLLQPRLVSYENLED 342 Query: 323 AIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTS 382 AIA SER V FT D+ + + + + +L+ L ++K FT+ Sbjct: 343 AIAHCSERNVAFTQEDLEKFILNQGLA--TDVSQIEPLVQA---NPELLSLSQQKRDFTT 397 Query: 383 GIHVLDELSVRALSRDIMKQNRVTVHPE------KSVPRTAGYSDAVSVLAQDRPSLAIV 436 V EL+ L + + HPE ++ AV A Sbjct: 398 LAAVNRELATIKLMQSGQGKVSPLAHPEVVENHLETTALNPDQRRAVLTTATTTDQFTAW 457 Query: 437 SGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEG 496 G G AG+ + EL +A G ++ A + + + Q+ + E + Sbjct: 458 QGVAG-AGKTFALKELKEIAAASGYTIKGFAPNSMAAKVLSQELDVQAETVARLLVSELP 516 Query: 497 MAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTG---TGSALMAMKDA 553 + +VD+ LS K+ L LL+ AA +VL+ ++ G+ +++ A Sbjct: 517 LEIELNQIWVVDEAGLLSAKDALALLERAALEQARVLLVGDTKQLSAVEAGNPFKSLQQA 576 Query: 554 GVNTYRWQGGEQRPA-----TIISEPDRNV--------------------RYARLAGDFA 588 G+ T ++ A + D + + A +A ++ Sbjct: 577 GIKTSHLNESNRQRAPKLKLAVDLIADGQIEEGFKRLDENGCIQTVTAESKIAAIAHEYV 636 Query: 589 ASVKAGEESVAQVS-GVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLR 647 + ++ +E+ +TQAIR L+T+G LG T+T L L S Sbjct: 637 TATPEQRARTLVLTGTNKERLAITQAIREHLRTEGSLG-TATTITQLQAKDLTSVQMRYT 695 Query: 648 DMYRPGMVMEQWNPETRSH--DRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLF 705 + G V+ R + V L L + G+ V + ++ Sbjct: 696 HNFELGDVVMPTRSYKRRGLEKGQLYKVVGKDGDGLKLEASNGQHFQVDTGFNKA---VY 752 Query: 706 RPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPF 765 + + VA G+RLR T L G V +++ + + + + Sbjct: 753 HRQNIEVAVGDRLRWTKNDRQLGRRNGQEFVVKAIAGSNAQIEYLHSGQTEFINLQ---- 808 Query: 766 TALKLENGWVETPGHSVSDSA-TVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTA 824 A L+ V T S +A V + + ++R+ +++LY+ + A Sbjct: 809 QAQHLDYATVSTTYSSQGKTADRVLIAADYTIGQESFYVAVSRARYELKLYTENKDDLLA 868 Score = 299 bits (765), Expect = 6e-79, Method: Composition-based stats. Identities = 154/906 (16%), Positives = 290/906 (32%), Gaps = 113/906 (12%) Query: 748 VVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLAR 807 + + + + KL + + + + L+ Sbjct: 219 IFKNKKFLGMVYQNYLALEVQKLGYEVKAREHGQFEIKGFRDEDLREFSKRRQQI--LSA 276 Query: 808 SGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTP---A 864 +G + + + + T + + + A ++ + L P + Sbjct: 277 AGENATWAEREAAWTATRNIKQKINPTELKVKWREEAAALGVKFVQPIEAQPLLQPRLVS 336 Query: 865 QQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAK 924 + + A+ + +AF+ DL + F T++ +LL + K Sbjct: 337 YENLEDAIAHCSERNVAFTQEDL----EKFILNQGLATDVSQIEPLVQANPELLSLSQQK 392 Query: 925 GYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEK---LTSGQRAATRMIL 981 + A+ E + ++ + G+ V PL E + L QR A Sbjct: 393 RD----FTTLAAVNRELATIKLMQSGQGKVSPLAHPEVVENHLETTALNPDQRRAVLTTA 448 Query: 982 ETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM-RSAGVDA 1040 T+D+FT QG AG GKT + + + + + G P A + + V A Sbjct: 449 TTTDQFTAWQGVAGAGKTFALKE----LKEIAAASGYTIKGFAPNSMAAKVLSQELDVQA 504 Query: 1041 QTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDT 1100 +T+A L N ++++DE+ ++ D A R + GDT Sbjct: 505 ETVARLLVSELP------LEIELNQIWVVDEAGLLSAKDALALLERAALEQARVLLVGDT 558 Query: 1101 DQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQT-PELREAVYSLINRDVERALSGLESVK 1159 QL A+ G PF+ Q + + + E RQ P+L+ AV + + +E L+ Sbjct: 559 KQLSAVEAGNPFKSLQQ-AGIKTSHLNESNRQRAPKLKLAVDLIADGQIEEGFKRLDENG 617 Query: 1160 PSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGR 1219 Q E AI +Y Sbjct: 618 CIQTVTAESK---------------------------------------IAAIAHEYVTA 638 Query: 1220 TPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLST 1279 TPE R +TL++T N++R + I + G LG + L ++ ++R Sbjct: 639 TPEQRARTLVLTGTNKERLAITQAIREHLRTEGSLGT-ATTITQLQAKDLTSVQMRYTHN 697 Query: 1280 WETHRDAL--------VLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTL 1331 +E + L +++ G D + + + +AV Sbjct: 698 FELGDVVMPTRSYKRRGLEKGQLYKVVGKDGDGLKLEASNGQHFQVDTGFNKAVY----- 752 Query: 1332 YTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAE 1391 I V GDR+R+TK+DR+ G + V A++G + + + + Q Sbjct: 753 -HRQNIEVAVGDRLRWTKNDRQLGRRNGQEFVVKAIAGSNAQIEYL-HSGQTEFINLQQA 810 Query: 1392 QHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQ 1451 QH+D A T + +QG + + G ES YVA+SR + +++YT+N+ Sbjct: 811 QHLDYATVSTTYSSQGKTADRVLIAADY------TIGQESFYVAVSRARYELKLYTENKD 864 Query: 1452 GWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDS 1511 ++ K A + K E+ + E V + V ++A G Sbjct: 865 DLLALAQSSRAKENALALLRQK------ELEKQRQSKLEKEKVTSTAIVAKEARSPGAGQ 918 Query: 1512 PARFIAPGRKY----PQPYVALPAFDRNGKSAGIWLNPLTTDDGNG----------LRGF 1557 A + Y P P + + P+ Sbjct: 919 QGSGGAEEKSYTNSSPLPNSSTLPPSISAPLPTSTSKPVIKKPVPKAAQPKVAFWTPDHV 978 Query: 1558 SGEGRVKGSGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVV-VRIAGEGRPWNP 1616 + Q + + + L A + RD + + N Sbjct: 979 AEVPEQLDCQHWQELVFGSAIHP--LFAACNFKSLHQTRDWEHEAWEYLMYSDHLPRTNT 1036 Query: 1617 GAITGG 1622 G ++ G Sbjct: 1037 GRLSSG 1042 >UniRef50_Q5WRX6 Putative uncharacterized protein n=1 Tax=Legionella pneumophila str. Lens RepID=Q5WRX6_LEGPL Length = 982 Score = 515 bits (1326), Expect = e-144, Method: Composition-based stats. Identities = 195/978 (19%), Positives = 367/978 (37%), Gaps = 100/978 (10%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRL 60 M+S+ ++SA A +YY+ NYY + +W G+G+++L L G V K+ LLEGRL Sbjct: 1 MLSVEPLKSAQGAADYYSKAFNYYSGDATAMQWLGQGSQKLKLSGVVQKEQMLALLEGRL 60 Query: 61 PDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEAL 120 PDG L Q+ HRPG+D+TFSAPKSVS++ LG L+ H++AV +RQ+E Sbjct: 61 PDGQVL---QNLEGEHRPGFDMTFSAPKSVSVLVGLGLAPELVRFHDEAVQLTIRQIEKE 117 Query: 121 -ASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDK 179 A TRV G+ T NL++A F +SR +P LHTH V N+T H G+ ++LSSD Sbjct: 118 FAETRVSRRGEISFEKTNNLLVAAFRQPSSRANDPALHTHCVTMNITFHEGKARSLSSDP 177 Query: 180 VGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVE---AFSG 236 + G IE + N G +YR+ L +++ G+ + GK G++E+ GVP E FS Sbjct: 178 SREHGVIEQIQNNAHYCGLIYRQHLANKLKETGFHLRLTGK-GLFEIDGVPDEVLHEFST 236 Query: 237 RSQTIREAVGEDASLKSRDV--AALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDA 294 R I + E ++ A + TRK+K+ D + +W Q K+ GFD +A+ Sbjct: 237 RRMDILGYMDEKGWNGAKSASTATVLTRKNKEEHDINLLTEDWKQRAKDIGFDAQAFMQH 296 Query: 295 ADQRADLRTL--------------TPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVL 340 D+ + L + + V AI LS+R F+ + Sbjct: 297 RDKSQSISWLSGVKDRLLALVNKYKKDSSPSEIEAAHACVVVAIETLSQRTSIFSERMLT 356 Query: 341 ARTVG--ILPPENGVIERARAGIDEAISREQLIPL---DREKGLFTSGIHVLDELSVRAL 395 + ++ P+ + I + I + L DR + L T+ + E A Sbjct: 357 QEAMKHSLIYPKAVSRQSIIESIQQEIKSQTLYEARCFDRGERLLTTPWLLTLETETIAR 416 Query: 396 SRDIMKQNRVTVH------------PEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAA 443 H P T +++ VL + + G G A Sbjct: 417 IDRNKGAVPAIAHLNAVTAFQKMRSSLLPYPMTNSQKESMKVLLTSKDRYLAIQGYAGVA 476 Query: 444 GQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGEL---ITGRRQLLEGMAFT 500 + ++E + QG +++ I + +++ + ++ + + + + T Sbjct: 477 -KTSMLSEARIFIEAQGHKLRGITVASSAAHELQEKAGIKADVFPLVHQELKEAQTASLT 535 Query: 501 PGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTG---TGSALMAMKDAGVNT 557 + I+D+ LS + L+ R ++++ + G ++ G+ T Sbjct: 536 K-TLFIIDEASMLSSHQGHELMKQIERVGARLVLVGDRAQLPSVNAGRIFGLTQEYGIET 594 Query: 558 YRWQGGEQRPATIISE----------------------PDRNVRYARLAGDFAASVKAGE 595 ++ I+ + R A +A + + + Sbjct: 595 AVMDEVVRQKNEILRQAVIATTKGFVQEALDNLDVKTLATHKERIAWIANHWLSLSASAR 654 Query: 596 ESVAQ-VSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGM 654 + + +T IRS LK +G L + + L ++ Y+ G Sbjct: 655 DETLLFAPTHANREEITTFIRSGLKQEGTLKGEQFSQIILKTKMMEPIQSRFVAYYQKGD 714 Query: 655 VMEQWNPETRS----HDRYVIDRV---TAQSHSLTLRDAQGETQVVRIS----------S 697 ++ R+ Y + + Q + L L D G ++ Sbjct: 715 MVRFNQSFKRNKIHAGSYYTVGEISKKHRQDNVLPLIDESGNLIKFNLNNLPNYKTHTAP 774 Query: 698 LDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPAT 757 + + ++ + + + G+++ T + G + + ++ + E Sbjct: 775 FERTIEVYETKSLELLVGDKVMWTRNFKANDIRNGQCATLHEIKNNSFMFI---TKEGRL 831 Query: 758 LPVSDSPFTALKLENGWVET----PGHSVSDSATVFASVTQMAMD-NATLNGLARSGRDV 812 L + S L+ +V T G + S + N ++R+ + Sbjct: 832 LTLEKSHPALKHLDYSYVLTNYKVQGKDAPYGIGLMESFHRFGSTLNNFYVQISRAIHGM 891 Query: 813 RLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLAL 872 L + E + + + + ++ + + L + Sbjct: 892 TLVTDNKEELVHAIRRNSNEKPASMDITSSAQLIHHERRFGAQNQLSIQSVIDKKKSLEI 951 Query: 873 PVVESKKLAFSMVDLLTE 890 + + + DL+ E Sbjct: 952 QEISK---SMNQDDLIIE 966 Score = 284 bits (726), Expect = 2e-74, Method: Composition-based stats. Identities = 136/756 (17%), Positives = 269/756 (35%), Gaps = 103/756 (13%) Query: 779 GHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSE 838 G + +ATV + D L + + + + +K + V + Sbjct: 252 GAKSASTATVLTRKNKEEHDINLLTEDWKQRAKDIGFDAQAFMQHRDKSQSISWLSGVKD 311 Query: 839 QIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFA--- 895 ++ + +++ + A + +A+ + + FS L EA + Sbjct: 312 RLLALVNKYKKDSSP-----SEIEAAHACVVVAIETLSQRTSIFSERMLTQEAMKHSLIY 366 Query: 896 AEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVM 955 + + I +IK L L ++I R I K AV Sbjct: 367 PKAVSRQSIIESIQQEIKSQTLYEARCFDRGERLLTTPWLLTLETETIAR-IDRNKGAVP 425 Query: 956 PLMERVP---------GELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVM 1006 + L +T+ Q+ + +++L + DR+ +QGYAGV KT+ Sbjct: 426 AIAHLNAVTAFQKMRSSLLPYPMTNSQKESMKVLLTSKDRYLAIQGYAGVAKTSMLSE-- 483 Query: 1007 SAVNMLPESERPRVVGLGPTHRAVGEMRS-AGVDAQT---LASFLHDTQLQQRSGETPDF 1062 + E++ ++ G+ A E++ AG+ A + L + +T Sbjct: 484 --ARIFIEAQGHKLRGITVASSAAHELQEKAGIKADVFPLVHQEL-------KEAQTASL 534 Query: 1063 SNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAAD 1122 + TLF++DE+SM+ + I G R V GD QL ++ G+ F L Q + Sbjct: 535 TKTLFIIDEASMLSSHQGHELMKQIERVGARLVLVGDRAQLPSVNAGRIFGLTQEY-GIE 593 Query: 1123 VAIMKEIVRQTPE-LREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSH 1181 A+M E+VRQ E LR+AV + V+ AL L+ + Sbjct: 594 TAVMDEVVRQKNEILRQAVIATTKGFVQEALDNLDVKTLA-------------------- 633 Query: 1182 SQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLN 1241 I + + AR++TL+ + +R + Sbjct: 634 ----------------------THKERIAWIANHWLSLSASARDETLLFAPTHANREEIT 671 Query: 1242 SMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALV--------LVDNV 1293 + I ++ G L EQ +L T + + R ++ ++ + Sbjct: 672 TFIRSGLKQEGTLKGEQFSQIILKTKMMEPIQSRFVAYYQKGDMVRFNQSFKRNKIHAGS 731 Query: 1294 YHRIAGIS---KDDGLITLQDAEGNTRLISPRE---------AVAEGVTLYTPDTIRVGT 1341 Y+ + IS + D ++ L D GN + + +Y ++ + Sbjct: 732 YYTVGEISKKHRQDNVLPLIDESGNLIKFNLNNLPNYKTHTAPFERTIEVYETKSLELLV 791 Query: 1342 GDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAIT 1401 GD++ +T++ + T+ + +S + A +H+D +Y +T Sbjct: 792 GDKVMWTRNFKANDIRNGQCATLHEIKNNSFMFITKEGRLLTLEKSHPALKHLDYSYVLT 851 Query: 1402 AHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINN-A 1460 + QG + I L E + + + YV +SR + + TDN++ AI + Sbjct: 852 NYKVQGKDAPYGIGLM--ESFHRFGSTLNNFYVQISRAIHGMTLVTDNKEELVHAIRRNS 909 Query: 1461 VQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAA 1496 +K + D+ ++++ ER F +L + Sbjct: 910 NEKPASMDITSSA---QLIHHERRFGAQNQLSIQSV 942 >UniRef50_B7KMV0 Conjugative relaxase domain protein n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KMV0_CYAP7 Length = 1170 Score = 500 bits (1287), Expect = e-139, Method: Composition-based stats. Identities = 195/1118 (17%), Positives = 401/1118 (35%), Gaps = 143/1118 (12%) Query: 10 AGSAGNYYTD-----KDNYYVLGS--MGERWAGRGAEQLGLQGSVDKDVFTRLLEGRLPD 62 + G YT+ ++NYY G W G+ A + GL G + + F + P+ Sbjct: 2 VATVGRCYTNPKDYAQENYYSTGDGLTNSEWLGKAASEQGLFGQIQEQHFHNAYQALDPN 61 Query: 63 GADLSRMQDGSNR----HRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVE 118 G L R Q+ + +RPG D+T SAPKS+S+ A++ GD +++AH AV + VE Sbjct: 62 GDPLRRQQNYRKQVQRHNRPGTDVTLSAPKSISVAALVMGDNLILEAHKAAVRATMNYVE 121 Query: 119 AL-ASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVT-QHNGEWKTLS 176 + G+ + + +A+F+HD +R+++PQLH+H V+ N T +G+W+ ++ Sbjct: 122 KNCIFYQTKQKGKKLLLQSKTAQIAVFHHDDNRNKDPQLHSHCVILNQTLCPDGKWRAVA 181 Query: 177 SDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVEA--- 233 + E +Y G Y +L Q+E G + + H ++E+ GV E Sbjct: 182 N---------EQLYTQIKTIGAYYAHELARQLEQNGCKIQWTDDH-IFELAGVDKEKLDA 231 Query: 234 -FSGRSQTIREAVG------EDASLKSRDVAALDTRK----SKQHVDPEIKMAEWMQTLK 282 FS RS I + + A+ + + L TRK Q D E ++ W Q Sbjct: 232 IFSTRSNQIEAELEKLGLTRKTANAQVKQTLCLKTRKEKKHHHQPEDRERQLQRWKQRAT 291 Query: 283 ETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLAR 342 E G +I ++A PG + + ++ A L+ R+ F ++L Sbjct: 292 EAGIEINREHKTGLEKAYNHPSHPGS-------IPELLSDASNILTSRQTAFREHELLKE 344 Query: 343 TVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQ 402 + A I++ +E+L+P G T+ + E + L+ Sbjct: 345 CLRQSQ-GKYDPNLLLAEINQ---KEELVPT--RDGRLTTKSQLNRERKIIELANTGKNS 398 Query: 403 NRVTVHPEKS------VPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMA 456 E++ G + A+ + R ++ +V G G G+ + L Sbjct: 399 RIPLASREQAQIIAQKRGLNTGQTTALIHIVTSRNAVVLVQGNAGV-GKTYTMNALKQTI 457 Query: 457 REQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLK 516 Q ++ +A + ++ + +S + + ++VD+ LS Sbjct: 458 GNQ--PIRGLAPSAAAADVLQIESGISSQTLASYLLTKNER-LPKKEILLVDEAGMLSSV 514 Query: 517 ETLTLLDGAARHNVQVLITDSGQRTG---TGSALMAMKDAGVNTYR-----WQGGE---- 564 + LL+ A +N +V++ ++ G+ +++ + T Q Sbjct: 515 QMEQLLEKAQANNNRVILVGDTKQLSAVEAGAPFKLLQEHSLPTAIIDQNLRQRDPSLKQ 574 Query: 565 ----------------------QRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVS 602 + R ++ D+ + ++ Sbjct: 575 VVDKMATHDRDESSINQAYQSLYHQGKVKQIAQEKERVEAISNDYLSRTTEVRNKTLILA 634 Query: 603 -GVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNP 661 ++ I+T AIR L +GVLG + L LD + Y+ G V++ Sbjct: 635 GTNADKQIITTAIRQGLMNEGVLGSESKELQTLKRKDLDKFAITKAHHYQRGDVIKFQID 694 Query: 662 ETR--SHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLR 719 + Y + V + ++++TL D G + + +++ +++ + GE++R Sbjct: 695 NAQFSRDFYYRVTDVNSITNTVTLIDTNGVDYTLPLDKYKQR-EVYQVQQLEIRLGEQMR 753 Query: 720 VTGK--IPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVET 777 T + G R V + ++ T+ VS S Sbjct: 754 FTKNISNHDYKQLNGQRFTVVGFTLYGQISLLTKGK---TMSVSPSQLLHSDYRYVDTVH 810 Query: 778 PGHSVSDSATVFASVTQMAM---DNATLNGLARSGRDVRLYSSL--DETRTAEKLARHPS 832 + ++ + ++ + +R+ ++ +Y++ D T + + + Sbjct: 811 SSQGQTADYCIYCASAAKSLTIGRESFYVAASRAKQEFIVYTANATDLGVTVQISRANEN 870 Query: 833 FTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAK 892 + + ++ ++S IS S H A + +++ S +L++ A Sbjct: 871 ASDLVKKQVEEGQKSSPSENISTAPSLTHPFAPKTDKDEKASFDNQLSQLSDAELVSVAL 930 Query: 893 SFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRAS--------------YE 938 S + + R ++ + + LV++ + Sbjct: 931 SVQEWLSSAPREPSLNKEKALRSEIEELQHHQIKLNKQLVTQKQESLQLGEPRSLFNPFG 990 Query: 939 AEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQR---AATRMILETSDRFTVVQGYAG 995 K I+ + L+ + L+ + EL + S Q+ A L + Sbjct: 991 VSKEIIDNQLQKIQLTSSLLHDIEFELKKTKNSFQKWQSEAKAYSLWEENP--------- 1041 Query: 996 VGKTTQFRAVMSAV-------NMLPESERPRVVGLGPT 1026 KT + + + + + E + GL T Sbjct: 1042 --KTKKVKQLAEQLKSQTIKERIARIKEGYVLYGLAQT 1077 Score = 314 bits (803), Expect = 3e-83, Method: Composition-based stats. Identities = 148/709 (20%), Positives = 265/709 (37%), Gaps = 79/709 (11%) Query: 783 SDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKT 842 + S + A + ++ + T N + ++ E R Sbjct: 235 TRSNQIEAELEKLGLTRKTANAQVKQTLCLKTRKEKKHHHQPEDRERQLQRWKQRATEAG 294 Query: 843 RAGETSLETAISHQKSALHTP--AQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTG 900 +T + + P + + A ++ S++ AF +LL E + Sbjct: 295 IEINREHKTGLEKAYNHPSHPGSIPELLSDASNILTSRQTAFREHELLKECLRQSQGKYD 354 Query: 901 FTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMER 960 L EIN ++ +L+ G L +++ E+ I+ GK + +PL R Sbjct: 355 PNLLLAEIN---QKEELVPTR------DGRLTTKSQLNRERKIIELANTGKNSRIPLASR 405 Query: 961 VPGELMEK---LTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESER 1017 +++ + L +GQ A I+ + + +VQG AGVGKT A+ + Sbjct: 406 EQAQIIAQKRGLNTGQTTALIHIVTSRNAVVLVQGNAGVGKTYTMNALKQTI------GN 459 Query: 1018 PRVVGLGPTHRAVGEMR-SAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVG 1076 + GL P+ A ++ +G+ +QTLAS+L + + L+DE+ M+ Sbjct: 460 QPIRGLAPSAAAADVLQIESGISSQTLASYLL-------TKNERLPKKEILLVDEAGMLS 512 Query: 1077 NTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQT-PE 1135 + M + A R + GDT QL A+ G PF+L Q S AI+ + +RQ P Sbjct: 513 SVQMEQLLEKAQANNNRVILVGDTKQLSAVEAGAPFKLLQEHS-LPTAIIDQNLRQRDPS 571 Query: 1136 LREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAM 1195 L++ V + D + + + Q Sbjct: 572 LKQVVDKMATHDRDES---------------------------------SINQAYQSLYH 598 Query: 1196 LKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELG 1255 EAI DY RT E R +TLI+ N D++++ + I G LG Sbjct: 599 QGKVKQIAQEKERVEAISNDYLSRTTEVRNKTLILAGTNADKQIITTAIRQGLMNEGVLG 658 Query: 1256 KEQVMVPVLNTANIRDGELRRLSTWETHR------DALVLVDNVYHRIAGISKDDGLITL 1309 E + L ++ + + ++ D + Y+R+ ++ +TL Sbjct: 659 SESKELQTLKRKDLDKFAITKAHHYQRGDVIKFQIDNAQFSRDFYYRVTDVNSITNTVTL 718 Query: 1310 QDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKS--DRERGYVANSVWTVTAV 1367 D G + + + +Y + + G++MRFTK+ + + + +TV Sbjct: 719 IDTNGVDYTLPLDKY--KQREVYQVQQLEIRLGEQMRFTKNISNHDYKQLNGQRFTVVGF 776 Query: 1368 S-GDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLM 1426 + ++L +T + P Q H D Y T H +QG + + I + L Sbjct: 777 TLYGQISLLTKGKTMSVSPSQ---LLHSDYRYVDTVHSSQGQTADYCIY--CASAAKSLT 831 Query: 1427 AGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPD 1475 G ES YVA SR KQ VYT N + + A D+ + + + Sbjct: 832 IGRESFYVAASRAKQEFIVYTANATDLGVTVQISRANENASDLVKKQVE 880 >UniRef50_B4WV74 TrwC relaxase family n=4 Tax=Synechococcus sp. PCC 7335 RepID=B4WV74_9SYNE Length = 1090 Score = 494 bits (1272), Expect = e-137, Method: Composition-based stats. Identities = 216/938 (23%), Positives = 364/938 (38%), Gaps = 102/938 (10%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMG----ERWAGRGAEQLGLQGSVDKDVFTRLL 56 M++ A V+ A AG+YY +KD+YY G +W G+GA LGL G VD+ F +LL Sbjct: 1 MLTNANVK-AEHAGSYY-EKDDYYTQGDPDLQSDTQWQGKGAAVLGLSGPVDQSAFQQLL 58 Query: 57 EGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQ 116 G+ P G L + +HR D TFSAPKSVS+ ++ D+R+I AH+QAV + Sbjct: 59 YGQTPSGESLHSQKIDPKKHRAATDYTFSAPKSVSIAGLIQKDRRVIKAHDQAVSTVLSV 118 Query: 117 VE-ALASTRVMTD-GQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ-HNGEWK 173 +E A TRV V TGN++ A F H+TSR+Q+PQLHTH VV N TQ NG W+ Sbjct: 119 LESRYAQTRVRHGPSIRSRVTTGNIIAATFRHETSREQDPQLHTHCVVINSTQLANGRWQ 178 Query: 174 TLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPV-- 231 ++++ E + N+ G Y+ +L Q+ LGYE G +G++E Sbjct: 179 SMAN---------EEIVKNRKLLGEFYQNELAVQLRQLGYEIAPQG-NGLFECKSYEQPL 228 Query: 232 -EAFSGRSQTIREAVGED-----------ASLKSRDVAALDTRKSKQHVDPEIKMAEWMQ 279 FS RS+ I + + S K ++ A L TR KQ V E+ +A W Sbjct: 229 LNLFSTRSRQIEAYIDKWEAKLQAEGRKPLSPKQKEQATLATRLKKQSVPREVLLAGWES 288 Query: 280 TLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDV 339 + + L TL+ + A T+ ++ +ER+ F V Sbjct: 289 AISS------GEVKLPEIPNSLPTLSEKVQVAVDGKLMNAATEGVSHAAERESVFKREKV 342 Query: 340 LARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDI 399 + E+ + AIS+ L+P + L+T+ + EL A+ + Sbjct: 343 ERFVLEHHLGEHS-----FDELQSAISQTDLVPAEE---LYTTEAAIERELDTIAMMKQG 394 Query: 400 MKQNRVTVH------------PEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRE 447 Q E T G A+ A + L G G AG+ Sbjct: 395 QGQVAEIAPLSDASAFVAATVAETDAVLTEGQHLAILETAISQDQLIAWQGVAG-AGKTY 453 Query: 448 RVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGSTVIV 507 + L +A EQG EV A ++ + ++ + G + + + IV Sbjct: 454 SLKLLAQLATEQGYEVTGYAPSAQAANVLAEETNIEGSTVARLLHSQDRDDSDKKAIWIV 513 Query: 508 DQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTG---TGSALMAMKDAGVNTYRWQGGE 564 D+ LS K+ +LL A + +V++ ++ G+ +++ AGV T + Sbjct: 514 DEAGLLSAKDAHSLLKKAQVNEARVILVGDTRQLSAVEAGNPFRSLQSAGVATCYLEESR 573 Query: 565 Q--------------------------RPATIISEPDRNVRYARLAGDFAASVKAGEESV 598 + R I + +R + D+ + Sbjct: 574 RQKTEALQTAVVCLAAGEQLEGLETLDRAGMISKVENDEIRQLAITRDYIRLSPEERQQT 633 Query: 599 AQVS-GVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVME 657 +S RE+ L IRS L+ +G LG M +L Y V+ Sbjct: 634 LILSGTNRERLALAGTIRSALQREGTLGEDTFKMGSLRAKDRTKPQLKYACAYALNDVIV 693 Query: 658 QWNPETRSH----DRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVA 713 R ++Y + + ++ LTL A G T ++ + + +++ VA Sbjct: 694 PVKDYRRYGMQRREQYRVVGLDIAANRLTLAAADGRTFAFDPATCAEK-TTYEVQQLRVA 752 Query: 714 DGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENG 773 GE+LR T G + V SV + + E + + + L+ Sbjct: 753 PGEQLRWTRNEAVAGARNGQTVTVESVDASGSATLRDPKGERLDVSLRGQQY----LDYA 808 Query: 774 WVETPGHSVSDSA-TVFASVTQMAMDNATLNGLARSGRDVRLYSSLDE--TRTAEKLARH 830 V T S +A V A++ ++R+ + LY++ + A++ A Sbjct: 809 LVSTTYSSQGKTADRVLAAIDSTLSKEGLYVAVSRAKSSLSLYTTDRAALYKKAQRSAAK 868 Query: 831 PSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAI 868 + + + + + + + + + Sbjct: 869 KNPSDFLTLFEMVNPDAQQQKSTEPARDLRGADQSEHV 906 Score = 283 bits (724), Expect = 4e-74, Method: Composition-based stats. Identities = 131/685 (19%), Positives = 222/685 (32%), Gaps = 94/685 (13%) Query: 871 ALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGL 930 + ++ F + F EL I+ L Sbjct: 326 GVSHAAERESVFKREKVERFVLEHHLGEHSFDELQSAISQ-----------TDLVPAEEL 374 Query: 931 LVSRASYEAEKSILRHILEGKEAVM---------PLMERVPGELMEKLTSGQRAATRMIL 981 + A+ E E + + +G+ V + E LT GQ A Sbjct: 375 YTTEAAIERELDTIAMMKQGQGQVAEIAPLSDASAFVAATVAETDAVLTEGQHLAILETA 434 Query: 982 ETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM-RSAGVDA 1040 + D+ QG AG GKT + + L + V G P+ +A + ++ Sbjct: 435 ISQDQLIAWQGVAGAGKTYSLK----LLAQLATEQGYEVTGYAPSAQAANVLAEETNIEG 490 Query: 1041 QTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDT 1100 T+A LH ++++DE+ ++ D R + GDT Sbjct: 491 STVARLLHSQ------DRDDSDKKAIWIVDEAGLLSAKDAHSLLKKAQVNEARVILVGDT 544 Query: 1101 DQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPE-LREAVYSLINRDVERALSGLESVK 1159 QL A+ G PFR + ++E RQ E L+ AV L + L L+ Sbjct: 545 RQLSAVEAGNPFRSL-QSAGVATCYLEESRRQKTEALQTAVVCLAAGEQLEGLETLDRAG 603 Query: 1160 PSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGR 1219 + AI RDY Sbjct: 604 MISKVENDEIRQL--------------------------------------AITRDYIRL 625 Query: 1220 TPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLST 1279 +PE R+QTLI++ N +R L I ++ G LG++ + L + +L+ Sbjct: 626 SPEERQQTLILSGTNRERLALAGTIRSALQREGTLGEDTFKMGSLRAKDRTKPQLKYACA 685 Query: 1280 WETHRD--------ALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTL 1331 + + + +R+ G+ +TL A+G T P A T Sbjct: 686 YALNDVIVPVKDYRRYGMQRREQYRVVGLDIAANRLTLAAADGRTFAFDP--ATCAEKTT 743 Query: 1332 YTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSG-DSVTLSDGQQTREIRPGQEQA 1390 Y +RV G+++R+T+++ G TV +V S TL D + R + Sbjct: 744 YEVQQLRVAPGEQLRWTRNEAVAGARNGQTVTVESVDASGSATLRDPKGER--LDVSLRG 801 Query: 1391 EQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNR 1450 +Q++D A T + +QG + +A + E YVA+SR K + +YT +R Sbjct: 802 QQYLDYALVSTTYSSQGKTADRVLAAIDS------TLSKEGLYVAVSRAKSSLSLYTTDR 855 Query: 1451 QGWTDAINNAVQKGTAHDVF----EPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGL 1506 + K D PD + + R + Sbjct: 856 AALYKKAQRSAAKKNPSDFLTLFEMVNPDAQQQKSTEPARDLRGADQSEHVGDCAGERIA 915 Query: 1507 AGGDSPARFIAPGRKYPQPYVALPA 1531 +G ++ R + QP A Sbjct: 916 SGFETRVRGSDYLTRGGQPAQRTAA 940 >UniRef50_C7PJH8 Conjugative relaxase domain protein n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PJH8_CHIPD Length = 870 Score = 492 bits (1267), Expect = e-137, Method: Composition-based stats. Identities = 160/880 (18%), Positives = 311/880 (35%), Gaps = 82/880 (9%) Query: 1 MMSIAQVRSAGSAGNYYTD---KDNYYVLGSM-GERWAGRGAEQLGLQGSVDKDVFTRLL 56 M+ + Q RSA A +Y+ D K +YY+ + GR A+++G+ G DK +F L Sbjct: 1 MLRMTQSRSAEQAKDYHNDALLKSDYYLNDQELRGSFNGRLAKRIGINGPTDKFIFDALC 60 Query: 57 EGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQ 116 E P + R GYDLTF PKSVS++ + ++ AV +R Sbjct: 61 ENINPITLKPLTSRKSKVRTV-GYDLTFCCPKSVSLLHAFAKNDSILTVFRNAVHRTMRD 119 Query: 117 VEALASTRVMTDGQSETVLTGNLVMALFNHDTSRD-----QEPQLHTHAVVANVTQHNGE 171 +E TRV G+ E +T L+ A F H TSR +P LH H N T Sbjct: 120 IEKDVQTRVRKKGKDENRITSELLYADFVHQTSRAVNREMPDPFLHCHCYTFNATYDP-- 177 Query: 172 WKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP- 230 +K K + + + L+ ++L + + LGY+ +E+ GV Sbjct: 178 -----IEKQFKAVQFRDTMRDLPYYEALFHKRLADGLMKLGYKIRPT--KSSFEVVGVDP 230 Query: 231 --VEAFSGRSQTIREAVGEDASLKSRDVAALDTRKSKQHV---DPEIKMAEWMQTLKETG 285 + FS R+ I + E ++++ + R + + +W + +K Sbjct: 231 KLIRLFSKRTNEIEQIAKEKNITDAKELDKIGARSRAKKQKGLSMDDLRTDWERQIKTLN 290 Query: 286 FDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVG 345 + ++ ++ + + + ++ ER +LA+ Sbjct: 291 L----------PSVNTSIVSVQESTSNALTADECIDHSLLHHFERNSVVQDRKILAKAYK 340 Query: 346 ILPPE-NGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDEL-SVRALSRDIMKQN 403 E N I + +I + ++ + + VL E + L+ D Sbjct: 341 FGIDEKNVSITQINTAFK---KHPNIINVKQDNRVLCTLDSVLREETRMVKLAHDGKDTF 397 Query: 404 RVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREV 463 ++ A + + ++I+ G G G+ + E V M + G++V Sbjct: 398 APLYISAPTLSLKGEQGRAARHVLTTKDKVSIIMGGAG-TGKTILMQETVSMIEKTGKKV 456 Query: 464 QIIAADRRSQMNMKQDERL-SGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLL 522 ++A ++ ++ + E + + E + + VD+ L K+ LL Sbjct: 457 IVVAPTAKASRDVLKKEGFADAQTVAKLLASPELQKYLQDQILWVDESGLLGTKDMTALL 516 Query: 523 DGAARHNVQVLITDSGQRTGT---GSALMAMKDAGVNT-----YRWQGGEQRPATIISEP 574 + A N +V+++ ++ G +L + DAG+ Q + + Sbjct: 517 ELATTFNTRVILSGDVRQHAAVAYGDSLRILMDAGIVPVTVNKIHRQRKQPYRDAVYDLS 576 Query: 575 DRN------------------VRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRS 616 + YA L D+ ++ G+ + + +T+AIR Sbjct: 577 KGHVMAAFGKMERMGAIKTCDENYASLTNDYMTAIGQGKTVLVVSPTHAQGETVTKAIRQ 636 Query: 617 ELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTA 676 L+ G L E T L + L + + G +++ + + Sbjct: 637 TLRHAGKLHGKEKPFTRLVNLNLTEAEKADSRYFDSGQILQFNQNCKGITHGTTLSIMQV 696 Query: 677 QSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKI---PGLRVSGGD 733 + L ++D +G+ ++ L + ++R EK+ + G+ + VT ++ G Sbjct: 697 EGKCLVMKDEKGKNVTASLNDLK-GFEVYRKEKIDLLKGDVITVTRNGVDKKKQSLNNGQ 755 Query: 734 RLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSAT-VFASV 792 L+V S ++ + P TLP L + T S + VF S Sbjct: 756 VLEVVSTAKGDIIARHPDTKALYTLPQQFG-----HLAYAYCVTSHASQGMTVDEVFISQ 810 Query: 793 TQMAMD----NATLNGLARSGRDVRLYSSLDETRTAEKLA 828 +R + +Y+ E Sbjct: 811 PASTFAAASMQQFYVSASRGRDCLHVYTDNKEALLDRISQ 850 Score = 302 bits (772), Expect = 1e-79, Method: Composition-based stats. Identities = 118/625 (18%), Positives = 226/625 (36%), Gaps = 76/625 (12%) Query: 864 AQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVA 923 A + I +L + +L +A F + + + A K +++ Sbjct: 311 ADECIDHSLLHHFERNSVVQDRKILAKAYKFGIDEKNVS-ITQINTAFKKHPNII---NV 366 Query: 924 KGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILET 983 K L + E +++ +GK+ PL L Q A R +L T Sbjct: 367 KQDNRVLCTLDSVLREETRMVKLAHDGKDTFAPL---YISAPTLSLKGEQGRAARHVLTT 423 Query: 984 SDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVG-EMRSAGV-DAQ 1041 D+ +++ G AG GKT + +S + E +V+ + PT +A ++ G DAQ Sbjct: 424 KDKVSIIMGGAGTGKTILMQETVSMI----EKTGKKVIVVAPTAKASRDVLKKEGFADAQ 479 Query: 1042 TLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTD 1101 T+A L +LQ+ + + +DES ++G DM L R + SGD Sbjct: 480 TVAKLLASPELQKY------LQDQILWVDESGLLGTKDMTALLELATTFNTRVILSGDVR 533 Query: 1102 QLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPE-LREAVYSLINRDVERALSGLESVKP 1160 Q A+A G R+ V + +I RQ + R+AVY L V A +E + Sbjct: 534 QHAAVAYGDSLRILMDAGIVPVTV-NKIHRQRKQPYRDAVYDLSKGHVMAAFGKMERMGA 592 Query: 1161 SQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRT 1220 + + Y ++ DY Sbjct: 593 IKTCDEN-----------------------------------------YASLTNDYMTAI 611 Query: 1221 PEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTW 1280 + L+V+ + + I AG+L ++ L N+ + E + Sbjct: 612 -GQGKTVLVVSPTHAQGETVTKAIRQTLRHAGKLHGKEKPFTRLVNLNLTEAEKADSRYF 670 Query: 1281 ETHRDALVLVDN---VYHRIAGISKDDGL-ITLQDAEGNTRLISPREAVAEGVTLYTPDT 1336 ++ + + + I + +G + ++D +G S + +G +Y + Sbjct: 671 DSGQILQFNQNCKGITHGTTLSIMQVEGKCLVMKDEKGKNVTASLNDL--KGFEVYRKEK 728 Query: 1337 IRVGTGDRMRFTKS---DRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQH 1393 I + GD + T++ +++ V V + + + Q H Sbjct: 729 IDLLKGDVITVTRNGVDKKKQSLNNGQVLEVVSTAKGDIIARHPDTKA--LYTLPQQFGH 786 Query: 1394 IDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGW 1453 + AY +T+H +QG + + A + YV+ SR + + VYTDN++ Sbjct: 787 LAYAYCVTSHASQGMTVDEVFISQPASTFAA--ASMQQFYVSASRGRDCLHVYTDNKEAL 844 Query: 1454 TDAINNAVQKGTAHDVFEPKPDREV 1478 D I+ + ++ +A ++ + P Sbjct: 845 LDRISQSGERMSALELIKSFPSFTP 869 >UniRef50_Q0HXX9 TrwC protein n=1 Tax=Shewanella sp. MR-7 RepID=Q0HXX9_SHESR Length = 1035 Score = 488 bits (1256), Expect = e-136, Method: Composition-based stats. Identities = 205/998 (20%), Positives = 345/998 (34%), Gaps = 176/998 (17%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRL 60 MMS ++SA AG+Y+ +KD+YYV G W G GAE LGL G VD++ F LLEG+L Sbjct: 1 MMSPKAIKSASQAGHYF-EKDDYYVDGLSPSEWFGDGAETLGLSGDVDRETFKFLLEGQL 59 Query: 61 PDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEAL 120 PDG L ++DG +H+PG DLTF APKSVS+++ + GD+RL+ AH++AV +R +E Sbjct: 60 PDGQRLGTVRDGEWKHQPGIDLTFLAPKSVSILSEVVGDQRLLSAHDKAVQVVLRYIEQE 119 Query: 121 ASTRV---MTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH-NGEWKTLS 176 + E T ++V A F H TSR +P LHTH VV N TQ +G W+++ Sbjct: 120 YIVTRNRNRAENTVEYEKTASMVAATFKHTTSRAFDPLLHTHVVVMNATQRADGLWRSIE 179 Query: 177 SDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVE---A 233 + ++ +Q G +YR+ L E+V++LGY+ + K G WE+ + E Sbjct: 180 NKP---------LFIDQKHLGLIYRQYLAEEVQSLGYDLDH-EKGGTWEIASISKEVIRE 229 Query: 234 FSGRSQTIREAVGED------ASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGF- 286 FS RS+ I +A+ A+ ++ A LDTR K H++ + +W + E Sbjct: 230 FSKRSEAIEKALEARGKTRDSATAAEKETATLDTRDRKVHMERGELLEKWHAEIGEDKLN 289 Query: 287 DIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGI 346 D++ + + + +AV AI L ER +T+ D++ Sbjct: 290 DLKKVIRQSQANLPTLEMKTEALLERVKVANEAVMWAIEHLGERDTSWTHHDLVKEASR- 348 Query: 347 LPPENGVIERARAGIDEAISREQLIP-----------LDREKGLFTSGIHVLDELSVRAL 395 ++ ID AI QLI + + +TS + E V Sbjct: 349 YAGSRVLLSDVNNAIDAAIGSGQLIDKSVRTFDKVSKREIDVRGYTSKAAIDIEDEVLKE 408 Query: 396 SRDIMKQNRVTVHPEKSVPR---------------TAGYSDAVSVLAQDRPSLAIVSGQG 440 + + E++ A A + + V G Sbjct: 409 EYLGRDRVQALCSREQAAAAISNAEEKANEFGYEWNADQRKATEGILLSENRIIGVQGFA 468 Query: 441 GAAGQRERVAELVMMAREQGREVQIIAADRRSQMNM------------------------ 476 G A + + AR+ G EV+ + + ++ Sbjct: 469 GTAKTTSVLRTVAETARDMGYEVRGLTPTNSAGQSLIDGAGIQSGTIQSFLAQNRNEWVQ 528 Query: 477 KQDERLSGELITGRRQLLEGMAFTPG---------------------------------- 502 ++ + I R + +E P Sbjct: 529 ERKTHTQIDKIDKRLEQIEKALSNPYVDEKTGVRIPENSPLYQKRLDELQYERSELQGER 588 Query: 503 -----------STVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTG---TGSALM 548 IVD+ + K LL A + +V++T ++ G+A Sbjct: 589 DGLGKMLEKTPQLWIVDESSMVGTKLMRDLLQRAGQSGARVVLTGDVRQLASVEAGAAFR 648 Query: 549 AMKDAGVNTYRWQGGEQRPA---------------------------------------T 569 +++ G+ TY + ++ Sbjct: 649 QLQNHGMETYHLEEIVRQTNRGTRDAVYLSLMKNASHALSRLEESGSTIKEVVSHKKNGK 708 Query: 570 IISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVRE-QAILTQAIRSELKTQGVLGLPE 628 I E R L D+ A + RE + + +R LK +G LG E Sbjct: 709 IDHEKSGEARRQELVTDYMALAPQERAKSIILEPSREGRRRTNELVREALKKEGALG-EE 767 Query: 629 VTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSH--DRYVIDRVTAQSHSLTLR-- 684 + + LSPV R + Y+ G ++ R V ++ + L+ Sbjct: 768 LRINQLSPVDATEAERRVVTSYQNGQIVRFARSFKREGIKKGLYYQVVGRDNNDILLKKF 827 Query: 685 --DAQGETQVVRISSLDSS-WSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVS 741 + Q E + +F + +A GE + D V + Sbjct: 828 GANEQAELIRFSPERYAAKNIQMFNLTESGLAVGETIVWRDNDKPTGRLNNDTATVEKIE 887 Query: 742 EDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQM---AMD 798 +T + + +S + + + T Sbjct: 888 GTNVTFRLSS-GKTGEFDMSKLANSHWDHGYAMTVHAAQGKTAQNVFVHAETSRESLLNT 946 Query: 799 NATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVV 836 ++R+ V LY+ E R Sbjct: 947 EQFYVQISRAKDRVYLYTDSKEGLVRAVEQRSGQKQTA 984 Score = 316 bits (808), Expect = 7e-84, Method: Composition-based stats. Identities = 155/749 (20%), Positives = 272/749 (36%), Gaps = 130/749 (17%) Query: 864 AQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVA 923 A +A+ A+ + + +++ DL+ EA +A +++ I+A I G L+ V Sbjct: 319 ANEAVMWAIEHLGERDTSWTHHDLVKEASRYAGSRVLLSDVNNAIDAAIGSGQLIDKSVR 378 Query: 924 -------KGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPG------------E 964 + S+A+ + E +L+ G++ V L R E Sbjct: 379 TFDKVSKREIDVRGYTSKAAIDIEDEVLKEEYLGRDRVQALCSREQAAAAISNAEEKANE 438 Query: 965 LMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLG 1024 + + QR AT IL + +R VQG+AG KTT +V+ V V GL Sbjct: 439 FGYEWNADQRKATEGILLSENRIIGVQGFAGTAKTT---SVLRTVAETARDMGYEVRGLT 495 Query: 1025 PTHRAVGEMRS-AGVDAQTLASFLHDTQLQQRSGETPDFSNTLF--------------LL 1069 PT+ A + AG+ + T+ SFL + + + Sbjct: 496 PTNSAGQSLIDGAGIQSGTIQSFLAQNRNEWVQERKTHTQIDKIDKRLEQIEKALSNPYV 555 Query: 1070 DE-------------------------------------------------SSMVGNTDM 1080 DE SSMVG M Sbjct: 556 DEKTGVRIPENSPLYQKRLDELQYERSELQGERDGLGKMLEKTPQLWIVDESSMVGTKLM 615 Query: 1081 ARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPE-LREA 1139 G R V +GD QL ++ G FR Q + ++EIVRQT R+A Sbjct: 616 RDLLQRAGQSGARVVLTGDVRQLASVEAGAAFRQLQNHGM-ETYHLEEIVRQTNRGTRDA 674 Query: 1140 VYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGE 1199 VY + ++ ALS LE + + E Sbjct: 675 VYLSLMKNASHALSRLEESGST-------------------------IKEVVSHKKNGKI 709 Query: 1200 AFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQV 1259 + +V DY P+ R +++I+ E RR N ++ + +K G LG E++ Sbjct: 710 DHEKSGEARRQELVTDYMALAPQERAKSIILEPSREGRRRTNELVREALKKEGALG-EEL 768 Query: 1260 MVPVLNTANIRDGELRRLSTWETHRDALV--------LVDNVYHRIAGISKDDGLITL-- 1309 + L+ + + E R +++++ + + +Y+++ G +D L+ Sbjct: 769 RINQLSPVDATEAERRVVTSYQNGQIVRFARSFKREGIKKGLYYQVVGRDNNDILLKKFG 828 Query: 1310 QDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSG 1369 + + SP A+ + ++ + G+ + + +D+ G + N TV + G Sbjct: 829 ANEQAELIRFSPERYAAKNIQMFNLTESGLAVGETIVWRDNDKPTGRLNNDTATVEKIEG 888 Query: 1370 DSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGF 1429 +VT + A H D YA+T H AQG + E +R+ + Sbjct: 889 TNVTFRLSSGKTGEFDMSKLANSHWDHGYAMTVHAAQGKTAQNVFV--HAETSRESLLNT 946 Query: 1430 ESAYVALSRMKQHVQVYTDNRQGWTDAI-NNAVQKGTAHDVFEPKPDREVMNAERLF--- 1485 E YV +SR K V +YTD+++G A+ + QK TA + + ++L+ Sbjct: 947 EQFYVQISRAKDRVYLYTDSKEGLVRAVEQRSGQKQTAKESSYQSLEPLDHLIDKLWQYP 1006 Query: 1486 STARELRDVAAGRAVLRQAGLAGGDSPAR 1514 + R L +A ++ S R Sbjct: 1007 ESGRSLEQLADRVQEREKSRGDRQHSLTR 1035 >UniRef50_B1XRA4 DNA helicase, TrwC and TraI like protein n=1 Tax=Synechococcus sp. PCC 7002 RepID=B1XRA4_SYNP2 Length = 1249 Score = 484 bits (1245), Expect = e-134, Method: Composition-based stats. Identities = 219/964 (22%), Positives = 378/964 (39%), Gaps = 99/964 (10%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMG--ERWAGRGAEQLGLQGSV-DKDVFTRLLE 57 M++IA + + AG+YY K+NYY +W G+GA LGL G + D +F +L+ Sbjct: 1 MLTIATM-TPAKAGSYY--KENYYAEEEQVEFSQWWGKGATALGLSGKISDGKIFQNILQ 57 Query: 58 GRLPDGADLSRMQDGSNRH-RPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQ 116 G+ DG R + G DLTFSAPKSVS+ A++ D+ LI+AHNQAV+ + Sbjct: 58 GKTADGQTQLRQAPPKGKEAIAGTDLTFSAPKSVSIAALVNQDQDLIEAHNQAVERVLSL 117 Query: 117 VEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHN-GEWKTL 175 +E + + N+ +A F HDT+R+ P LHTH +V N+ Q G W++ Sbjct: 118 IEERYGETRVNK---QHTPVKNICVAKFLHDTNRELNPNLHTHCLVMNMAQDASGIWRSA 174 Query: 176 SSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP---VE 232 ++ +Y ++I G+LYR +L + V+ LGYE E+ G++E+ G VE Sbjct: 175 AN---------RLLYQHRILLGKLYRNELAQAVQNLGYEIEIRA-DGLFELKGYTREQVE 224 Query: 233 AFSGRSQTIREAVGEDA---SLKSRDVAALDTRK-SKQHVDPEIKMAEWMQTLKETGFDI 288 FS R Q I E + + + ++R A +TRK + VD + + EW T G DI Sbjct: 225 GFSDRHQQILEYLKTEGLEDTNENRIKALFETRKIKQHDVDRQALLVEWQTT--AEGLDI 282 Query: 289 RAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILP 348 G ++ + V QA+ ER FT D+ V Sbjct: 283 EH------------PTPNLEYPVTGKNLAELVAQAVRHSEERTAIFTREDLEVFIV--AE 328 Query: 349 PENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTV- 407 P E A ID +LI R + ++ E AL + + + Sbjct: 329 PTGHSFEEIEAAIDA---NPRLI---RRGLRLATEESLIREKMTIALMQAGQGKLAPMLT 382 Query: 408 -HPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQII 466 + S T +DAV+ + + G G AG+ + LV +A+ QG EV Sbjct: 383 TQTQLSEVLTTSQTDAVNHALSSQDRVVGWVGVAG-AGKTFTLNTLVKIAQAQGIEVSGF 441 Query: 467 AADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAA 526 A D S + + + + + L + ++D+ KLS ++ LL ++ Sbjct: 442 APDASSAEVLGDEVGIGTDTVA-YHLLQQHEPSQKRQLWLIDEAGKLSAQKAYQLLLKSS 500 Query: 527 RHNVQVLITDSGQR---TGTGSALMAMKDAGVN---------------------TYRWQG 562 + N QVL+ ++ G+ ++ D G++ TY G Sbjct: 501 QQNAQVLLVGDPKQLTAVNAGAPFKSLIDNGLSASHLKDFLRQKDSIIARAVQLTYHNLG 560 Query: 563 GE-----QRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVS-GVREQAILTQAIRS 616 GE Q+ + PD R ++A + +A +S RE+ + +R Sbjct: 561 GEAIAWLQKHGKVSEIPDIEDRAQQIAAAYLKLNEAERAETLVLSGTHRERHGIIHQLRV 620 Query: 617 ELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPE--TRSHDRYVIDRV 674 LK +G + E LS + + Y G V+ + RY + ++ Sbjct: 621 GLKREGKIQETEYLTETLSRKDMTEEQKQHARFYAVGDVLIPLKDHNCLKRSKRYQVTQI 680 Query: 675 TAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDR 734 + +L T ++ +F ++P+A G+RL+ T + + G Sbjct: 681 SGDDVTL----NNHITLNMKGLKYPLKTEVFTKNQLPIAVGDRLKWTRNNRPQKRTNGRE 736 Query: 735 LQVASVSEDAMTV-VVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSAT-VFASV 792 + + V VV + ++D ++ V T S +A VF S Sbjct: 737 FTIIGIDSLTCLVSVVDDQGRLDEFSLNDL----NHCDHAIVGTVYSSQGKTAKQVFVSF 792 Query: 793 T--QMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLE 850 + L L+R+ DV ++++ + E + SE +K + + + Sbjct: 793 GNDPTVNRESVLVALSRAKYDVTIWTTNA-QKLRELADISHNQVNPSELLKEQGIKLPIP 851 Query: 851 TAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINA 910 A H + +A V + + +D+ G + + Sbjct: 852 PAPLHLNEKHWLERVEKSGIAPEVAALNAESLAGMDVYERLLEDHLATLGSGQYVTQPMK 911 Query: 911 QIKR 914 ++ Sbjct: 912 RVMD 915 Score = 286 bits (731), Expect = 6e-75, Method: Composition-based stats. Identities = 113/664 (17%), Positives = 226/664 (34%), Gaps = 85/664 (12%) Query: 868 IHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYG 927 + A+ E + F+ DL + G F E+ I+A L+ + Sbjct: 302 VAQAVRHSEERTAIFTREDLEVFIVAE-PTGHSFEEIEAAIDA---NPRLIRRGL----- 352 Query: 928 TGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRF 987 L + S EK + + G+ + P++ +L E LT+ Q A L + DR Sbjct: 353 --RLATEESLIREKMTIALMQAGQGKLAPMLT-TQTQLSEVLTTSQTDAVNHALSSQDRV 409 Query: 988 TVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMR-SAGVDAQTLASF 1046 G AG GKT ++ + +++ V G P + + G+ T+A Sbjct: 410 VGWVGVAGAGKTFTLNTLV----KIAQAQGIEVSGFAPDASSAEVLGDEVGIGTDTVAYH 465 Query: 1047 LHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAI 1106 L P L+L+DE+ + + + + + GD QL A+ Sbjct: 466 LLQQ-------HEPSQKRQLWLIDEAGKLSAQKAYQLLLKSSQQNAQVLLVGDPKQLTAV 518 Query: 1107 APGQPFRLQQTRSAADVAIMKEIVRQTPE-LREAVYSLINRDVERALSGLESVKPSQVPR 1165 G PF+ + + +K+ +RQ + AV + A++ L+ Sbjct: 519 NAGAPFKSLID-NGLSASHLKDFLRQKDSIIARAVQLTYHNLGGEAIAWLQKHGKVSEIP 577 Query: 1166 QEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEARE 1225 + I Y R Sbjct: 578 --------------------------------------DIEDRAQQIAAAYLKLNEAERA 599 Query: 1226 QTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHR- 1284 +TL+++ + +R + + ++ G++ + + + L+ ++ + + + + Sbjct: 600 ETLVLSGTHRERHGIIHQLRVGLKREGKIQETEYLTETLSRKDMTEEQKQHARFYAVGDV 659 Query: 1285 -----DALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRV 1339 D L + +++ IS DD + L P + ++T + + + Sbjct: 660 LIPLKDHNCLKRSKRYQVTQISGDDVTLNNHITLNMKGLKYPLK-----TEVFTKNQLPI 714 Query: 1340 GTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYA 1399 GDR+++T+++R + +T+ + + +S + H D A Sbjct: 715 AVGDRLKWTRNNRPQKRTNGREFTIIGIDSLTCLVSVVDDQGRLDEFSLNDLNHCDHAIV 774 Query: 1400 ITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINN 1459 T + +QG + ES VALSR K V ++T N Q + + Sbjct: 775 GTVYSSQGKTAKQVFV----SFGNDPTVNRESVLVALSRAKYDVTIWTTNAQKLRELADI 830 Query: 1460 AVQKGTAHDVFE------PKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPA 1513 + + ++ + P P + E+ + E +A A L LAG D Sbjct: 831 SHNQVNPSELLKEQGIKLPIPPAPLHLNEKHWLERVEKSGIAPEVAALNAESLAGMDVYE 890 Query: 1514 RFIA 1517 R + Sbjct: 891 RLLE 894 >UniRef50_UPI00016ACDBF TrwC protein n=1 Tax=Burkholderia thailandensis MSMB43 RepID=UPI00016ACDBF Length = 941 Score = 484 bits (1244), Expect = e-134, Method: Composition-based stats. Identities = 194/960 (20%), Positives = 350/960 (36%), Gaps = 130/960 (13%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMG--ERWAGRGAEQLGLQGSVDKDVFTRLLEG 58 M+S+ V +A A Y+ KDNYY W G+GA LGL G V F LLEG Sbjct: 1 MLSLHNVSNAAQAQTYFA-KDNYYTQDENAEHSAWFGKGAATLGLSGKVTPAQFMNLLEG 59 Query: 59 RLPDGADLSRMQDGSN-----RHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFA 113 R+ + + D H+PG DLTFSAPKSVS++A + GDK + AH +A + A Sbjct: 60 RVGEQQLGKWVTDEKTCERRQEHQPGIDLTFSAPKSVSLLAEVAGDKDVRAAHERAAEVA 119 Query: 114 VRQVEALAS-TRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH-NGE 171 + +E TR +G + TGN+++A+F H+TSRD +PQ HTHAV+ N TQ +G+ Sbjct: 120 LTYIEEQVIRTRATKNGVTSLEYTGNMIVAMFRHNTSRDLDPQTHTHAVLINATQREDGQ 179 Query: 172 WKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP- 230 W+++ + +Y Q G +Y +L ++ +GY K+G +E+ GV Sbjct: 180 WRSIDN---------REIYQIQKLAGAIYNAELAGGLQQIGYRLTNPDKNGNFEIQGVSR 230 Query: 231 --VEAFSGRSQTIREAVGED------ASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLK 282 +E FS R ++E + + AS ++ AAL TR K+ VD + + +W + Sbjct: 231 EQIEHFSQRRAAMKEVLEKQNTTLDAASAAEKERAALATRDRKKDVDHQELLDDWNARAE 290 Query: 283 ETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLAR 342 E D+ R A +R + G + A++ A A L ER+V D++ Sbjct: 291 EHDIDLDGLRAATAKRKE-----DGIGIPQRLTGRDAMSFAAAQLIEREVAVDKIDLVKT 345 Query: 343 TVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQ 402 + G E + D+ + LI L +K +T+ E R + Sbjct: 346 AIEHGTGRVGARE-VLSAFDDLEKKGDLIALPDDK--YTTRKMFQSERWAIDFVRQQKDR 402 Query: 403 NRVTVHP------------EKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVA 450 + + E+ P G DA+ + V G G G+ + Sbjct: 403 APIVLDAATVTQRIAASEKEQPFPYATGQKDAIVLALTSPDRFVAVQGLAG-TGKTTMLR 461 Query: 451 ELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGR----RQLLEGMAFTPG---- 502 L +A +G V+ +A + M ++ ++ + + RQL + + F Sbjct: 462 TLNDIAVSEGYVVRGMAPTGAASKIMVKETGIAADTVAMFQIKERQLQKDIEFAKQFAPD 521 Query: 503 -----STVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSG---QRTGTGSALMAMKDAG 554 +VD+ L+ ++ + + A + N +V+ Q G + G Sbjct: 522 FVRRPELWVVDESSFLAQRQLAQIHNLAEKANAKVVYLGDKLQLQGVEAGKPFELAQGHG 581 Query: 555 VNTYRWQGGEQRPATII-----------------SEPDRNVRYARLAGDFAAS------- 590 + T ++ + D ++ + D+ A Sbjct: 582 IATAHMTEINRQKTPHMQKAVDIITGRNLLKAGERLTDIELKRNLQSFDYLARQGKVTET 641 Query: 591 ---------------VKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALS 635 + S+ +++ L IR+E+ + L E + L Sbjct: 642 EDVLGDAKSRYFAMSPEERAASIVITPLNKDRVSLNDDIRAEMWARRELKGRESALEILV 701 Query: 636 PVWLDSRSRYLRDMYRPGMVMEQWNPETR----SHDRYVIDRVTAQSHSLTLRDAQGETQ 691 Y PG V+ + D + V + +T+ G Sbjct: 702 SKGWTRAMIKEAQYYTPGDVVRFNRDYQQIDASKGDYARVLGVDHELGVVTIEKRDGTRL 761 Query: 692 VVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPG 751 + + ++ E+ +A G+ +R+T G+ +V + + V Sbjct: 762 DWEPAKHN-KVEVYDREQRQLAVGDVIRLTRNDDT--FKNGETAKVIGLQGGLAVLEVSD 818 Query: 752 RAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFA-------------------SV 792 +A + V+ + S + +F Sbjct: 819 KAATSHHHVNLNTSQHWDHAYTSTIHAAQGASKAQVIFVINMPDIDPEKPKQAEQMLAGF 878 Query: 793 TQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETA 852 ++ D + G+ R+ RD+ + ++ + T + Q + + Sbjct: 879 AKVFGDRSYYVGVTRASRDIAIVTNDVGLTRQAITQQQDKTTSIGAQGEHDRSDDVQRKE 938 Score = 299 bits (766), Expect = 5e-79, Method: Composition-based stats. Identities = 156/861 (18%), Positives = 282/861 (32%), Gaps = 91/861 (10%) Query: 670 VIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRV 729 + R A + +T + G V S + V + Sbjct: 126 QVIRTRATKNGVTSLEYTGNMIVAMFRHNTSRDLDPQTHTHAVLINAT--QREDGQWRSI 183 Query: 730 SGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSP----FTALKLENGWVETPGHSVSDS 785 + Q+ ++ + G + +++ F + +E + Sbjct: 184 DNREIYQIQKLAGAIYNAELAGGLQQIGYRLTNPDKNGNFEIQGVSREQIEHFSQRRAAM 243 Query: 786 ATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAG 845 V + + +D + + A Sbjct: 244 KEVLEKQNTTLDAASAAEKERAALATRDRKKDVDHQELLDDWNARAEEHDIDLDGLRAAT 303 Query: 846 ETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELG 905 E I + A A + +++A +DL+ A G E+ Sbjct: 304 AKRKEDGIGIPQRLTGRDAM---SFAAAQLIEREVAVDKIDLVKTAIEHGTGRVGAREVL 360 Query: 906 GEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKE---------AVMP 956 + K+GDL+ + +R +++E+ + + + K+ V Sbjct: 361 SAFDDLEKKGDLIALP------DDKYTTRKMFQSERWAIDFVRQQKDRAPIVLDAATVTQ 414 Query: 957 LMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESE 1016 + E +GQ+ A + L + DRF VQG AG GKTT R +N + SE Sbjct: 415 RIAASEKEQPFPYATGQKDAIVLALTSPDRFVAVQGLAGTGKTTMLRT----LNDIAVSE 470 Query: 1017 RPRVVGLGPTHRAVGEM-RSAGVDAQTLASFL-------HDTQLQQRSGETPDFSNTLFL 1068 V G+ PT A M + G+ A T+A F D + ++ L++ Sbjct: 471 GYVVRGMAPTGAASKIMVKETGIAADTVAMFQIKERQLQKDIEFAKQFAPDFVRRPELWV 530 Query: 1069 LDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKE 1128 +DESS + +A+ + L + V GD QLQ + G+PF L Q A M E Sbjct: 531 VDESSFLAQRQLAQIHNLAEKANAKVVYLGDKLQLQGVEAGKPFELAQGH-GIATAHMTE 589 Query: 1129 IVRQ-TPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKL 1187 I RQ TP +++AV + R++ +A L ++ + + A + VTE Sbjct: 590 INRQKTPHMQKAVDIITGRNLLKAGERLTDIELKRNLQSFDYLARQGKVTE--------- 640 Query: 1188 AEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDV 1247 + Y +PE R ++++T LN+DR LN I Sbjct: 641 -----------------TEDVLGDAKSRYFAMSPEERAASIVITPLNKDRVSLNDDIRAE 683 Query: 1248 REKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLV--------DNVYHRIAG 1299 EL + + +L + ++ + Y R+ G Sbjct: 684 MWARRELKGRESALEILVSKGWTRAMIKEAQYYTPGDVVRFNRDYQQIDASKGDYARVLG 743 Query: 1300 ISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVAN 1359 + + G++T++ +G P A V +Y + ++ GD +R T++D + Sbjct: 744 VDHELGVVTIEKRDGTRLDWEP--AKHNKVEVYDREQRQLAVGDVIRLTRND--DTFKNG 799 Query: 1360 SVWTVTAVSGDSVTLSDGQQTRE-IRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEG 1418 V + G L + QH D AY T H AQGAS+ I + Sbjct: 800 ETAKVIGLQGGLAVLEVSDKAATSHHHVNLNTSQHWDHAYTSTIHAAQGASKAQVIFVIN 859 Query: 1419 TE--------------GNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKG 1464 + G S YV ++R + + + T++ AI K Sbjct: 860 MPDIDPEKPKQAEQMLAGFAKVFGDRSYYVGVTRASRDIAIVTNDVGLTRQAITQQQDKT 919 Query: 1465 TAHDVFEPKPDREVMNAERLF 1485 T+ + + + Sbjct: 920 TSIGAQGEHDRSDDVQRKERE 940 >UniRef50_A8ZNG7 Putative uncharacterized protein n=2 Tax=Acaryochloris marina MBIC11017 RepID=A8ZNG7_ACAM1 Length = 1344 Score = 478 bits (1230), Expect = e-133, Method: Composition-based stats. Identities = 181/894 (20%), Positives = 332/894 (37%), Gaps = 118/894 (13%) Query: 1 MMSIAQVRSAGSA-GNYYTDK-------DNYYVLGS----MGERWAGRGAEQLGLQGSVD 48 M + +A YYT+ D YY G +W G GA+ L L+G ++ Sbjct: 1 MFRPTLINKGNAAIEEYYTEDEALKNSEDEYYAPGKDPVVSPCKWYGNGADSLNLKGVIN 60 Query: 49 KDVFTRLLEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQ 108 + VF +L G P R + + + R G DLTF K S++A++GGD+R+I+ H Q Sbjct: 61 QKVFKKLFYGHHPQTGKRLRKKPTNGQERLGIDLTFGPGKEASILALVGGDRRIIELHEQ 120 Query: 109 AVDFAVRQVE-ALASTRVM-TDGQSETVLTGNLVMALFNHDTSRDQ--------EPQLHT 158 A+ + TRV +GQ V T +L+ A NH T+R +P LHT Sbjct: 121 ALQKVFDIFQSRYTQTRVRHGNGQRSLVNTNSLIGAFINHATARPVTIDGKTYSDPALHT 180 Query: 159 HAVVANVTQHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVV 218 H VV N TQ NG+W++LS++ + K+ G +YR + + + LGY Sbjct: 181 HIVVMNATQINGKWQSLSNEAIFKSLS----------LGSIYRHFIDKGLAELGYTVRPD 230 Query: 219 GKHGMWEMPGVPVE---AFSGRSQTIREAVGEDA---SLKSRDVAALDTRKSKQH-VDPE 271 G + G+ E F R+Q + + + + ++R A L TR K+ + Sbjct: 231 GT-----IEGLSPETVWHFKKRTQEVERYLKKYGLEDTQENRQNAVLRTRNKKEDNTNIP 285 Query: 272 IKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERK 331 KM W++ L GF + + ++ V AIA L ER Sbjct: 286 EKMKGWVEELIINGFTL------------PKPAKKSTWVHRPELTREYVDSAIAHLQERN 333 Query: 332 VQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELS 391 +F + + PP E + I + QLI + +T+ + E Sbjct: 334 AEFCHELIEQWVFDQRPP--FTYEELQTEIA---NHPQLIRTKNDT--YTTQYALDREEK 386 Query: 392 VRALSRDIMKQ--NRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERV 449 R L + T E + A +AV L I G G G+ + Sbjct: 387 TRQLWAAGQHKFTPITTGKIEFNKMLNADQRNAVRNTLASSNRLIIWHGLSGV-GKTTTL 445 Query: 450 AELVMMAREQGREVQ--IIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGSTVIV 507 +EL ++Q + ++ + ++ + ++G + + +P I+ Sbjct: 446 SELQKHIEAINPDIQIKGYSPTTKAAGVLAEELGIETTTVSGL--ITRKLDTSPNQWWII 503 Query: 508 DQGEKLSLKETLTLLDGAARHNVQVLITDS---GQRTGTGSALMAMKDAGVNTYRWQGGE 564 D+ S ++ L +L A N +VL+ GS ++ AG TY + Sbjct: 504 DEAGMKSAEQGLEVLKRAEAVNARVLLVGDINQNSSVNAGSPQRSLMKAGAETYHIKTIL 563 Query: 565 QRPATIISE--------------------------PDRNVRYARLAGDFAASVKAGEESV 598 ++ + D R A++A + + + Sbjct: 564 RQKRIVQRRAVELVSIGKPLEALKLLNEYGHVTEVADHRTRAAQVAEKYLSLKPKERKQT 623 Query: 599 AQVS-GVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVME 657 V+ RE+ +T IR L+ +GV+ + + L L + Y+ + Sbjct: 624 LIVTGTHRERKAITILIREGLRAEGVIKGEDQALRQLVDKRLTTEQTRHLRYYKTDDYVI 683 Query: 658 QWNP---ETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVAD 714 + Y + V S + + G+ + L++ ++F +K+ VA Sbjct: 684 PNENFSSRLQKGKLYKVVGVDEASGVVRVVSQGGQYSSFDPAKLENK-TVFTAQKINVAV 742 Query: 715 GERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGW 774 G++LR T L + GD+ +V +V + + + + L+L+ Sbjct: 743 GDQLRWTRNN--LHGNNGDQFKVTAVEGHRIQINHKKWIDTS---------KPLELDYSI 791 Query: 775 VETPG--HSVSDSATVFA-SVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAE 825 T + +F+ ++ + ++R ++ +++ E + Sbjct: 792 TSTTHAAQGQTYYRVIFSGTIDPTSSREPFYVAISRQKHELYIFTENYEGMCRQ 845 Score = 291 bits (743), Expect = 2e-76, Method: Composition-based stats. Identities = 127/764 (16%), Positives = 245/764 (32%), Gaps = 95/764 (12%) Query: 723 KIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSV 782 +S S+S ++ + T L V Sbjct: 191 NGKWQSLSNEAIF--KSLSLGSIYRHFIDKGLAELGYTVRPDGTIEGLSPETVWHFKKRT 248 Query: 783 SDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKT 842 + N + R+ E P + Sbjct: 249 QEVERYLKKYGLEDTQENRQNAVLRTRNKK------------EDNTNIPEKMKGWVEELI 296 Query: 843 RAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFT 902 G T + A ++ + A+ ++ + F +L+ + + Sbjct: 297 INGFTLPKPAKKSTWVHRPELTREYVDSAIAHLQERNAEFC-HELIEQWVFDQRPPFTYE 355 Query: 903 ELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVP 962 EL EI ++ + + E+ + G+ P+ Sbjct: 356 ELQTEIANH---------PQLIRTKNDTYTTQYALDREEKTRQLWAAGQHKFTPITTGKI 406 Query: 963 GELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVG 1022 E + L + QR A R L +S+R + G +GVGKTT + + + ++ G Sbjct: 407 -EFNKMLNADQRNAVRNTLASSNRLIIWHGLSGVGKTTTLSELQKHIEAINPD--IQIKG 463 Query: 1023 LGPTHRAVGEM-RSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMA 1081 PT +A G + G++ T++ + + N +++DE+ M Sbjct: 464 YSPTTKAAGVLAEELGIETTTVSGLITR--------KLDTSPNQWWIIDEAGMKSAEQGL 515 Query: 1082 RAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVY 1141 A R + GD +Q ++ G P R A I + ++ R AV Sbjct: 516 EVLKRAEAVNARVLLVGDINQNSSVNAGSPQRSLMKAGAETYHIKTILRQKRIVQRRAVE 575 Query: 1142 SLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAF 1201 + AL L VTE + + Sbjct: 576 LVSIGKPLEALKLLNEYG---------------HVTEVADHR------------------ 602 Query: 1202 PDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMV 1261 T + Y P+ R+QTLIVT + +R+ + +I + G + E + Sbjct: 603 -----TRAAQVAEKYLSLKPKERKQTLIVTGTHRERKAITILIREGLRAEGVIKGEDQAL 657 Query: 1262 PVLNTANIRDGELRRLSTWETHRDAL-------VLVDNVYHRIAGISKDDGLITLQDAEG 1314 L + + R L ++T + L +++ G+ + G++ + G Sbjct: 658 RQLVDKRLTTEQTRHLRYYKTDDYVIPNENFSSRLQKGKLYKVVGVDEASGVVRVVSQGG 717 Query: 1315 NTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTL 1374 P A E T++T I V GD++R+T+++ + VTAV G + + Sbjct: 718 QYSSFDP--AKLENKTVFTAQKINVAVGDQLRWTRNNLHGN--NGDQFKVTAVEGHRIQI 773 Query: 1375 SDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYV 1434 + + +P + +D + T H AQG + I G + E YV Sbjct: 774 NHKKWIDTSKPLE------LDYSITSTTHAAQGQTYYRVIF----SGTIDPTSSREPFYV 823 Query: 1435 ALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREV 1478 A+SR K + ++T+N +G + + + ++ + E+ Sbjct: 824 AISRQKHELYIFTENYEGMCRQVQCSAAQLNPRELLGLDRELEL 867 >UniRef50_Q9X4G2 Mobilization protein TraI n=10 Tax=root RepID=Q9X4G2_ECOLX Length = 1078 Score = 474 bits (1218), Expect = e-131, Method: Composition-based stats. Identities = 192/941 (20%), Positives = 341/941 (36%), Gaps = 127/941 (13%) Query: 1 MMSIAQV--RSAGSAGNYYTD-KDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLE 57 M+ I + ++ S YY+D KD+YY S W G GAE LGL G V+ F LL Sbjct: 1 MLDITTITRQNVTSVVGYYSDAKDDYYSKDSSFTSWQGTGAEALGLSGDVESARFKELLV 60 Query: 58 GRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQV 117 G + + R + + R GYDLTFSAPK VSM A++ GDK +I+AH +AV AVR+ Sbjct: 61 GEIDTFTHMQRHVGDAKKERLGYDLTFSAPKGVSMQALIHGDKTIIEAHEKAVAAAVREA 120 Query: 118 EALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH-NGEWKTLS 176 E LA R G+S T T NLV+A F H+TSR +P LHTHA V N+TQ +G+W+ L Sbjct: 121 EKLAQARTTRQGKSVTQNTNNLVVATFRHETSRALDPDLHTHAFVMNMTQREDGQWRALK 180 Query: 177 SDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVE---A 233 +D + N++ G +Y+++L ++ GYE K+ ++M E A Sbjct: 181 ND---------ELMRNKMHLGDVYKQELALELTKAGYELRYNSKNNTFDMAHFSDEQIRA 231 Query: 234 FSGRSQTIREAVG------EDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFD 287 FS RS+ I + + E A +++ ++ TR+ K E EW K G D Sbjct: 232 FSRRSEQIEKGLAAMGLTRETADAQTKSRVSMATREKKTEHSREEIHQEWASRAKTLGID 291 Query: 288 IRAYRDAADQRADLRTLTPGPASQ---DGPDVQQAVTQAIAGLSERKVQFTYTDVLARTV 344 + + A +A+ A+ LSER F ++ Sbjct: 292 FDNREWQGHGKPLEADIARNMAPDFTSPEVKADRAIQFAVKSLSERDASFERQKLIQIAN 351 Query: 345 GILPPENGVIERARAGIDEAISREQLI--------------------------------- 371 + + I +A+ + +I Sbjct: 352 KQVL-GHATIADVEKAYLKAVQKGAIIEGEARYQSTLKVGASVMAETLTRKEWIDSLTNS 410 Query: 372 ------------------PLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPE--- 410 L + T+ + E S+ + Q + E Sbjct: 411 GMRADKARFAVDDGIKNGRLKKTSHRVTTVEGIRLERSILTIESRGRGQMPRQLTAEIAG 470 Query: 411 ---KSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIA 467 AV+ + + G G G+ + QG +V +A Sbjct: 471 QLLSGKTLKKEQMRAVTEIVTSKDRFVAAHGYAG-TGKSYMTMAAKELLESQGLKVTALA 529 Query: 468 ADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAAR 527 + ++ D L + + + S V +D+ + ++ L++ + Sbjct: 530 PYGTQKKALEDD-GLPARTVAAFLKAKDKK-LDEKSVVFIDEAGVIPARQMKQLMEVIEK 587 Query: 528 HNVQVLITDSGQR---TGTGSALMAMKDAGVNTYRWQGGEQRPAT--------------- 569 HN + + + G + AG+ T + +++ Sbjct: 588 HNARAVFLGDTSQTKAVEAGKPFEQLIKAGMQTSYMKDIQRQKNEVLLEAVKYAAEGNAA 647 Query: 570 --------IISEPDRNVRYARLAGDFAASVKAGEESVAQVS-GVREQAILTQAIRSELKT 620 + + R A+LA + + +++ +S + L IR L Sbjct: 648 RALKNITGVNELKEEAPRLAQLADRYLSLSSEQQDATLIISGTNASRKTLNDYIRGNL-- 705 Query: 621 QGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVM---EQWNPETRSHDRYVIDRVTAQ 677 L T T L V R + G ++ + + + + Y + T Sbjct: 706 --GLAGTGETFTLLDRVDSTQAERRDSRYFSKGQIIIPEQDYKNGMKRGESYQVLD-TGP 762 Query: 678 SHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQV 737 + LT+ GE + + S+++ +A G+++ VT L V+ GDR V Sbjct: 763 GNKLTVESISGEQIAFSPRTH-TKLSVYQAVSAELAPGDKVMVTRNDKTLDVANGDRFTV 821 Query: 738 ASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQ--M 795 +V + +T+ + T+ + + L ++ +F T+ Sbjct: 822 KTVEGEKLTLE---DKKGRTVELDKKQASYLSYAYATTVHKSQGLTCDRVLFNIDTKSLT 878 Query: 796 AMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVV 836 + G++R+ +V +++ ++ + P T Sbjct: 879 TSKDVFYVGISRARHEVEIFTDDKKSLASSVSRDSPKTTAA 919 Score = 291 bits (743), Expect = 2e-76, Method: Composition-based stats. Identities = 159/1079 (14%), Positives = 320/1079 (29%), Gaps = 159/1079 (14%) Query: 583 LAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLP-EVTMTALSPVWLDS 641 L+GD ++ + Q + A + L P V+M AL Sbjct: 46 LSGDVESARFKELLVGEIDTFTHMQRHVGDAKKERLGYDLTFSAPKGVSMQALIHGDKTI 105 Query: 642 RSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSS 701 + + + E+ + + + T T R + + Sbjct: 106 IEAHEKAVAAAVREAEKLAQARTTRQGKSVTQNTNNLVVATFRHETSRALDPDLHTHAFV 165 Query: 702 WSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVS 761 ++ + E R +R +++ + V + + + + Sbjct: 166 MNMTQREDGQW------RALKNDELMR----NKMHLGDVYKQELALELTKAGYELRYNSK 215 Query: 762 DSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDET 821 ++ F + + A+ M + T + +S + E Sbjct: 216 NNTFDMAHFSDEQIRAFSRRSEQIEKGLAA---MGLTRETADAQTKSRVSMATREKKTEH 272 Query: 822 RTAEKLAR--HPSFTVVSEQIKTRAGETSLE------TAISHQKSALHTPAQQAIHLALP 873 E + T+ + ++ ++ A +AI A+ Sbjct: 273 SREEIHQEWASRAKTLGIDFDNREWQGHGKPLEADIARNMAPDFTSPEVKADRAIQFAVK 332 Query: 874 VVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKG-------- 925 + + +F L+ A ++ +++G ++ + Sbjct: 333 SLSERDASFERQKLIQIANKQVLGHATIADVEKAYLKAVQKGAIIEGEARYQSTLKVGAS 392 Query: 926 ---------------------------------------YGTGLLVSRASYEAEKSILRH 946 + + + E+SIL Sbjct: 393 VMAETLTRKEWIDSLTNSGMRADKARFAVDDGIKNGRLKKTSHRVTTVEGIRLERSILTI 452 Query: 947 ILEGKEAVMPLMERVPGEL---MEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFR 1003 G+ + + + L Q A I+ + DRF GYAG GK+ Sbjct: 453 ESRGRGQMPRQLTAEIAGQLLSGKTLKKEQMRAVTEIVTSKDRFVAAHGYAGTGKSYMT- 511 Query: 1004 AVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFS 1063 A L ES+ +V L P + G+ A+T+A+FL ++ + Sbjct: 512 ---MAAKELLESQGLKVTALAPYGTQKKALEDDGLPARTVAAFL-------KAKDKKLDE 561 Query: 1064 NTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADV 1123 ++ +DE+ ++ M + +I RAV GDT Q +A+ G+PF + Sbjct: 562 KSVVFIDEAGVIPARQMKQLMEVIEKHNARAVFLGDTSQTKAVEAGKPFEQLIK-AGMQT 620 Query: 1124 AIMKEIVRQTPE-LREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHS 1182 + MK+I RQ E L EAV + RAL + Sbjct: 621 SYMKDIQRQKNEVLLEAVKYAAEGNAARALKNIT-------------------------- 654 Query: 1183 QEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNS 1242 G + Y + E ++ TLI++ N R+ LN Sbjct: 655 ---------------GVNELKEEAPRLAQLADRYLSLSSEQQDATLIISGTNASRKTLND 699 Query: 1243 MIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETH------RDALVLVDNVYHR 1296 I L +L+ + E R + +D + Sbjct: 700 YIR----GNLGLAGTGETFTLLDRVDSTQAERRDSRYFSKGQIIIPEQDYKNGMKRGESY 755 Query: 1297 IAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGY 1356 + +T++ G SPR V + GD++ T++D+ Sbjct: 756 QVLDTGPGNKLTVESISGEQIAFSPRTHTKLSVYQAVSAE--LAPGDKVMVTRNDKTLDV 813 Query: 1357 VANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIAL 1416 +TV V G+ +TL D + ++ ++ AYA T H +QG + + Sbjct: 814 ANGDRFTVKTVEGEKLTLEDKKG--RTVELDKKQASYLSYAYATTVHKSQGLTCDRVLFN 871 Query: 1417 EGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDR 1476 T+ L + YV +SR + V+++TD+++ +++ K TA ++ Sbjct: 872 IDTKS---LTTSKDVFYVGISRARHEVEIFTDDKKSLASSVSRDSPKTTAAEI------- 921 Query: 1477 EVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDR-- 1534 +R F +D+ ++ ++ G + P + D Sbjct: 922 -----DRFFGLEARFKDIGRDTSLETRSAEKGLPEATGESMAFNQKPDEHNMTTGTDYQP 976 Query: 1535 --NGKSAGIWLNPLTTDDGNGLRGFSGEGRVKGSGDAQFVALQGSRNGESLLADNMQDG 1591 N + A D R + + + + D Q E ++ + Sbjct: 977 VSNAEDAFHLKQNPMDDSVGLRRHEAQQNDAELAHDYAAADDQQWSAQEYADYEHYAEA 1035 >UniRef50_A5VG54 Conjugative relaxase region-like protein n=2 Tax=Sphingomonas wittichii RW1 RepID=A5VG54_SPHWW Length = 1014 Score = 471 bits (1212), Expect = e-131, Method: Composition-based stats. Identities = 217/980 (22%), Positives = 364/980 (37%), Gaps = 126/980 (12%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMG-ERWAGRGAEQLGLQGSVDKDVFTRLLEGR 59 M+S+A VRSA A NY+ D Y V GS W G GAE +GL G V KD F +L G Sbjct: 1 MLSVAGVRSASGAANYFAKDDYYTVEGSSEISAWGGEGAEAIGLSGEVSKDAFEGVLNGI 60 Query: 60 LPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEA 119 LP G ++++++ R GYDLTFS PKS S+MA + GDKR++DA+ AV + VE Sbjct: 61 LPSGEAVAQVEN----RRAGYDLTFSMPKSASVMAYVAGDKRVLDANMAAVKATMAWVEK 116 Query: 120 L-ASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ-HNGEWKTLSS 177 A R +G+ V TGNLV ALF HDTSR +PQ H HAV+AN+T+ +G+W+ L + Sbjct: 117 NLAEGRRDIEGRKVPVQTGNLVYALFQHDTSRALDPQAHIHAVIANLTRMPDGKWQALHA 176 Query: 178 DKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP---VEAF 234 DK+ ++ G +Y L+ +E +GY+ ++ GKHG +E+ GVP + F Sbjct: 177 DKLW---------SHNSIIGSIYHAFLRAGLERIGYQVDLKGKHGTFEIAGVPKAVIGEF 227 Query: 235 SGRSQTIREAVGEDA--SLKSRDVAALDTRKSKQH-VDPEIKMAEWMQTLKETGFDIRAY 291 S R + I + S + +R K D W+ GFD + Sbjct: 228 SQRREEILDHATRLGIKSPEGLREITKRSRDPKLDVEDRAALKQGWIDQAAAHGFDGKDL 287 Query: 292 ---------------------RDAADQRADLR----------------TLTPGPASQDGP 314 R D R L S Sbjct: 288 RAAAEARAGMASSENALERGYRAIVDAVTGARQTLGALLRPQDPLVDNALARAVKSPAEA 347 Query: 315 DVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIP-- 372 Q AV A+ LSER+ + ++L +T L + ++ ID + QLIP Sbjct: 348 RAQLAVASAVRILSEREAAWPV-NLLGKTALDLGLKGVTVDLIERRIDRLVQNRQLIPGV 406 Query: 373 ---LDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTV---------HPEKSVPRTAGYS 420 DR + T+ + E + A + ++ V P G Sbjct: 407 ATAADRTGRMVTTQEALRTEEKILAAVEEGKGKSEPIVAAADAPQRLQDAAERPLNPGQL 466 Query: 421 DAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDE 480 A +++ V G G G+ + + +A E+G + +A + ++ + Sbjct: 467 AAATMILSSADRTVSVQGAAG-TGKSTMLQAVARVAEEEGARITGLAFQNKMVADLAEGA 525 Query: 481 RLSGELITGR-------------RQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAAR 527 + + I G+ ++VD+ +S E L L A Sbjct: 526 GIKAQTIASFVLANERFVTERDTLGYEAAREKLAGTMLLVDETSMVSSNEMLKLHQITAA 585 Query: 528 HNV-QVLITDSGQRTG---TGSALMAMKDAGVN------TYRWQGGEQRPATIISEPDRN 577 V ++++ Q+ G A ++ G R + + R ++ + Sbjct: 586 LGVDKLVLVGDRQQLSSIDAGKAFAMIQAGGGTMARMDQNIRQRTDQLRTVAALANIGKA 645 Query: 578 VRYARLAGD---------------FAASVKAGEESVAQVSGVRE-QAILTQAIRSELKTQ 621 ++ GD + E+ A + R+ +A++ Q I+ L + Sbjct: 646 GAALKVLGDRVVEAGEPAAAAADMWLELSPGEREATAVFASGRDARAVINQRIQDGLIAE 705 Query: 622 GVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETR----SHDRYVIDRVTAQ 677 G + + +T V YR G +E + RY + +V A Sbjct: 706 GSVKGQAIHLTVFERVNTTREELRYASTYRQGQTLEVGRGGAQDVGIKAGRYDVLKVHA- 764 Query: 678 SHSLTLRDAQGETQVVR----ISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGD 733 + + L D + + + L + + + +G+R+R T + Sbjct: 765 NGKVELSDGRRRIRFDPQKLSPTEQRDRLQLSEKKDLQLREGDRIRWTANDKQRGLHNAA 824 Query: 734 RLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSD--SATVFAS 791 +V V D + V TL + D + L L ++ + TV +S Sbjct: 825 LARVVGVDADGVKVETAD-KVLLTLSLGDPMLSRLDLAYSLNMHMAQGITTDKAITVMSS 883 Query: 792 VTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLET 851 + + N RD D+ + A +L +P S + R + Sbjct: 884 HERNLSNQRLFNVGVTRVRDELTMVVDDKEKLARQLDMNPGNKTSSLETLGRLDIDGRKG 943 Query: 852 AISHQKSALHTPAQQAIHLA 871 + + ++L+ Sbjct: 944 PGAQPREKFDPGPIDGVNLS 963 Score = 282 bits (721), Expect = 7e-74, Method: Composition-based stats. Identities = 137/643 (21%), Positives = 242/643 (37%), Gaps = 82/643 (12%) Query: 858 SALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDL 917 S AQ A+ A+ ++ ++ A+ + L A +G + I+ ++ L Sbjct: 343 SPAEARAQLAVASAVRILSEREAAWPVNLLGKTALDLGLKGVTVDLIERRIDRLVQNRQL 402 Query: 918 LY-VDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLME------RVPGELMEKLT 970 + V A ++ ++ + E+ IL + EGK P++ R+ L Sbjct: 403 IPGVATAADRTGRMVTTQEALRTEEKILAAVEEGKGKSEPIVAAADAPQRLQDAAERPLN 462 Query: 971 SGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAV 1030 GQ AA MIL ++DR VQG AG GK+T +AV E E R+ GL ++ V Sbjct: 463 PGQLAAATMILSSADRTVSVQGAAGTGKSTMLQAVARV----AEEEGARITGLAFQNKMV 518 Query: 1031 GEMRS-AGVDAQTLASFLHDTQLQQRSGE-------TPDFSNTLFLLDESSMVGNTDMAR 1082 ++ AG+ AQT+ASF+ + + + T+ L+DE+SMV + +M + Sbjct: 519 ADLAEGAGIKAQTIASFVLANERFVTERDTLGYEAAREKLAGTMLLVDETSMVSSNEMLK 578 Query: 1083 AYALIAAGGG-RAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVY 1141 + + AA G + V GD QL +I G+ F +A M + +RQ + V Sbjct: 579 LHQITAALGVDKLVLVGDRQQLSSIDAGKAFA-MIQAGGGTMARMDQNIRQRTDQLRTVA 637 Query: 1142 SLIN-RDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEA 1200 +L N AL L Sbjct: 638 ALANIGKAGAALKVL-------------------------------------------GD 654 Query: 1201 FPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVM 1260 A + +P RE T + + R V+N I D G + + + Sbjct: 655 RVVEAGEPAAAAADMWLELSPGEREATAVFASGRDARAVINQRIQDGLIAEGSVKGQAIH 714 Query: 1261 VPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLIS 1320 + V N ELR ST+ + V + GI + A G L Sbjct: 715 LTVFERVNTTREELRYASTYRQGQTLEVGRGGA--QDVGIKAGRYDVLKVHANGKVELSD 772 Query: 1321 PREAVAEGVTLYTPDTI------------RVGTGDRMRFTKSDRERGYVANSVWTVTAVS 1368 R + +P ++ GDR+R+T +D++RG ++ V V Sbjct: 773 GRRRIRFDPQKLSPTEQRDRLQLSEKKDLQLREGDRIRWTANDKQRGLHNAALARVVGVD 832 Query: 1369 GDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAG 1428 D V + + + +DLAY++ H AQG + AI + + + ++ Sbjct: 833 ADGVKVETADKVLLTLSLGDPMLSRLDLAYSLNMHMAQGITTDKAITVM--SSHERNLSN 890 Query: 1429 FESAYVALSRMKQHVQVYTDNRQGWTDAIN-NAVQKGTAHDVF 1470 V ++R++ + + D+++ ++ N K ++ + Sbjct: 891 QRLFNVGVTRVRDELTMVVDDKEKLARQLDMNPGNKTSSLETL 933 >UniRef50_C1F5K2 Conjugative relaxase domain protein n=4 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F5K2_ACIC5 Length = 926 Score = 471 bits (1211), Expect = e-130, Method: Composition-based stats. Identities = 206/922 (22%), Positives = 358/922 (38%), Gaps = 105/922 (11%) Query: 1 MMSIAQVRSAGSAGNYYTDK-----DNYYVLGSM-GERWAGRGAEQLGLQGSVDKDVFTR 54 M++I++ SA A Y+ + NY+ G W G+ A++ GL G+V F R Sbjct: 1 MLNISKPLSASQAQTYHAKEFTAAEQNYWKQGDTIQGEWHGKLADEFGLSGTVGAAEFAR 60 Query: 55 LLEGRLPDGADLSRMQD-------------GSNRHRPGYDLTFSAPKSVSMMAMLGGDKR 101 L EG+ P+ HR G+D TFSAPKS+S+ A++GGD R Sbjct: 61 LSEGQHPETGKQLVSHRVVHEYKNSEGKTVSPVEHRAGWDATFSAPKSISLTALVGGDDR 120 Query: 102 LIDAHNQAVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQE----PQLH 157 + +AH +AV+ A+ ++E R+ + +E TG A F HDT+R + PQLH Sbjct: 121 VREAHREAVNVALNELEKYTQARIGGNNPAE--TTGKFAAAKFEHDTARPVDGYAAPQLH 178 Query: 158 THAVVANVTQHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEV 217 TH VV N+T+ + + + +++ +Q +Y+ L ++ LGYE E Sbjct: 179 THVVVFNMTERD--------NGAMRALQPHSLFESQQFATAVYQSHLTYKLRDLGYEIEA 230 Query: 218 VGKHGMWEMPGVP---VEAFSGRSQTIREAVGEDA--SLKSRDVAALDTRKSKQHVDPEI 272 GK G ++ G +EA S R Q I EA+G ++ +AA +TR K + P Sbjct: 231 -GKSGAPDVKGFTAAYLEASSPRRQQIEEALGRSGFTGPEAAQIAAHNTRDKKVILSPAE 289 Query: 273 KMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKV 332 +A Q E G AA QR +T P ++ V++AVT A ER+ Sbjct: 290 ILAAHKQIADEFGNQAERVVAAARQRRMEQTQERLP-NERQQQVREAVTFARDKGFEREA 348 Query: 333 QFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDRE----KGLFTSGIHVLD 388 + + E E RA + I+ + + + FT+ + Sbjct: 349 VVDERALYVDALRRGMGEMTYPE-VRASFEARIASGEFKQITDDGSKAGRRFTTATTIKA 407 Query: 389 ELSVRALSRDIMKQNRVTVHPEKSVPR-------TAGYSDAVSVLAQDRPSLAIVSGQGG 441 E + RD + + E +VP A V + + + G+ G Sbjct: 408 ESEIVQKVRDGQSRAPQIMGIENAVPLVDSRPHFNAAQKRVVEEVLTSYDRVQGLQGRAG 467 Query: 442 AAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRR---QLLEGMA 498 +G+ +A + A G V+ A R+ + +D + + + L Sbjct: 468 -SGKTSVLATIREGAERNGYAVEGFAPTSRAAKQL-RDAGIQADTLQRFLAGGGLQVAGG 525 Query: 499 FTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTG--TGSALMAMKDAGVN 556 +VD+ S ++ L+ A + +LI D+ Q G G M++AG+ Sbjct: 526 PARKHLYMVDESSLASTQQMRDFLNKIAPQDKVLLIGDTRQHQGVDAGKPFEQMQEAGMR 585 Query: 557 -----TYRWQGGE---------------------QRPATIISEPDRNVRYARLAGDFAAS 590 Q Q I D R +A D+AA Sbjct: 586 MAQLDQIMRQKDPDLLKAVEHLSNNETALGVEMLQHQGRITQIEDPQQRITAIAKDYAAH 645 Query: 591 VKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVW-LDSRSRYLRDM 649 ++ ++ + + QA+R EL+ GV+ + +M L+P + R Sbjct: 646 PES---TLIVSPDNASRRAINQAVRQELQALGVVDKTDHSMRVLAPRNDMTGADREWAAR 702 Query: 650 YRPGMVMEQWN----PETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLF 705 Y+PG V+ + + A + +T+R G+ S L + + Sbjct: 703 YQPGDVLHYVRGSKEHGIEARSYAQVVTTNAPENLVTVRKVDGQQVTYDPSRL-RGVAAY 761 Query: 706 RPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPF 765 R + A G+R+++T L+V+ D + + + ++ + VS P Sbjct: 762 REIEREFAIGDRVQLTAPNRDLQVANRDLGTLENFDDAGRITLLMDSGKN----VSFDPR 817 Query: 766 TALKLENGWVETPGHSVS-DSATVFAS-----VTQMAMDNATLNGLARSGRDVRLYSSLD 819 ++G+ T S SA V + ++ ++R+ +DV+++ + D Sbjct: 818 EMRHFDHGYAVTSHSSQGLTSARVLVNIDTQVHPELINGRFAYVSVSRASQDVQIF-TND 876 Query: 820 ETRTAEKLARHPSFTVVSEQIK 841 AE L+ S T +K Sbjct: 877 AANLAENLSHDASKTSALPLVK 898 Score = 295 bits (754), Expect = 1e-77, Method: Composition-based stats. Identities = 136/817 (16%), Positives = 264/817 (32%), Gaps = 83/817 (10%) Query: 686 AQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAM 745 Q + ++ + E + + V ++ Sbjct: 140 TQARIGGNNPAETTGKFAAAKFEHDTARPVDGYAAPQLHTHVVVFNMTERDNGAMRALQP 199 Query: 746 TVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNG- 804 + + + S + L + A + + + Sbjct: 200 HSLFESQQFATAVYQSHLTYKLRDLGYEIEAGKSGAPDVKGFTAAYLEASSPRRQQIEEA 259 Query: 805 -------------LARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLET 851 +A + A F +E++ A + +E Sbjct: 260 LGRSGFTGPEAAQIAAHNTRDKKVILSPAEILAAHKQIADEFGNQAERVVAAARQRRMEQ 319 Query: 852 AISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQ 911 + ++A+ A ++ L +A + E+ A+ Sbjct: 320 TQERLPNERQQQVREAVTFARDKGFEREAVVDERALYVDALRRGMGEMTYPEVRASFEAR 379 Query: 912 IKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLM----ERVPGELME 967 I G+ + + + +AE I++ + +G+ +M + Sbjct: 380 IASGEFKQITDDGSKAGRRFTTATTIKAESEIVQKVRDGQSRAPQIMGIENAVPLVDSRP 439 Query: 968 KLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTH 1027 + Q+ +L + DR +QG AG GKT+ + E V G PT Sbjct: 440 HFNAAQKRVVEEVLTSYDRVQGLQGRAGSGKTSVLATI----REGAERNGYAVEGFAPTS 495 Query: 1028 RAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALI 1087 RA ++R AG+ A TL FL LQ G L+++DESS+ M I Sbjct: 496 RAAKQLRDAGIQADTLQRFLAGGGLQVAGG---PARKHLYMVDESSLASTQQMRDFLNKI 552 Query: 1088 AAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQT-PELREAVYSLINR 1146 A + + GDT Q Q + G+PF Q + +A + +I+RQ P+L +AV L N Sbjct: 553 APQD-KVLLIGDTRQHQGVDAGKPFEQMQE-AGMRMAQLDQIMRQKDPDLLKAVEHLSNN 610 Query: 1147 DVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPM 1206 + + L+ + P Sbjct: 611 ETALGVEMLQHQGR--------------------------------------ITQIEDPQ 632 Query: 1207 TLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNT 1266 AI +DY E TLIV+ N RR +N + + G + K + VL Sbjct: 633 QRITAIAKDYAAHP----ESTLIVSPDNASRRAINQAVRQELQALGVVDKTDHSMRVLAP 688 Query: 1267 AN-IRDGELRRLSTWETHRDALVLV--------DNVYHRIAGISKDDGLITLQDAEGNTR 1317 N + + + ++ + Y ++ + + L+T++ +G Sbjct: 689 RNDMTGADREWAARYQPGDVLHYVRGSKEHGIEARSYAQVVTTNAPENLVTVRKVDGQQV 748 Query: 1318 LISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDG 1377 P GV Y GDR++ T +R+ + T+ D+ ++ Sbjct: 749 TYDPSRL--RGVAAYREIEREFAIGDRVQLTAPNRDLQVANRDLGTLENFD-DAGRITLL 805 Query: 1378 QQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALS 1437 + + + +H D YA+T+H +QG + + T+ + AYV++S Sbjct: 806 MDSGKNVSFDPREMRHFDHGYAVTSHSSQGLTSARVLVNIDTQV-HPELINGRFAYVSVS 864 Query: 1438 RMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKP 1474 R Q VQ++T++ + +++ K +A + + Sbjct: 865 RASQDVQIFTNDAANLAENLSHDASKTSALPLVKTAT 901 >UniRef50_A4LST4 TrwC protein n=10 Tax=Proteobacteria RepID=A4LST4_BURPS Length = 991 Score = 471 bits (1210), Expect = e-130, Method: Composition-based stats. Identities = 202/970 (20%), Positives = 368/970 (37%), Gaps = 145/970 (14%) Query: 1 MMSIAQVRSAGS--AGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEG 58 M++ +R A +Y++ D+YY + W G GA+ LGL G V++ +RLL+G Sbjct: 1 MLNATLIRGNNQYAAAHYFSAADDYYAKEN-PGEWQGDGAQALGLAGPVEQVQLSRLLDG 59 Query: 59 RLPDGADLSRMQDG-SNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQV 117 +LP+G + D N+ R G DLTFSAPKSVSM A++ GDK + AH++AV A+ QV Sbjct: 60 QLPNGERIQTTFDPTDNKKRMGLDLTFSAPKSVSMQALVAGDKDVTAAHDRAVTRALEQV 119 Query: 118 EALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH-NGEWKTLS 176 E LA R G+S TGN+V+ F H+ SR ++PQLHTH+VV N+T+ +G W+ LS Sbjct: 120 EQLAEARKKVKGKSYRERTGNMVIGKFRHEMSRAKDPQLHTHSVVLNMTRRADGMWRALS 179 Query: 177 SDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP---VEA 233 + E+++ + Y+ +L ++ LGY+ VV G +E+ + +EA Sbjct: 180 N---------EDIFRAKKTIDATYQAELARGLQELGYQIRVVDDRGNFELAHISRDQIEA 230 Query: 234 FSGRSQTIREAVG------EDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFD 287 FS RS+ I EA+ A+ + V +L TR K D EI W++ +E G D Sbjct: 231 FSARSRVIEEALANEGKTRATATTLEKQVISLATRPRKDESDREIVKQYWVEKSRELGID 290 Query: 288 IRAYRDAADQRADLRTLTPGPASQDGPD----------------VQQAVTQAIAGLSERK 331 R D R + G D D Q V AI+ L+ER+ Sbjct: 291 YGP-RSQLDGRTYETGDSFGGRGWDRGDADDSIVAVSLPASLTPAQAVVQYAISHLTERE 349 Query: 332 VQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLI-------------------- 371 T + A + + RA I I + L+ Sbjct: 350 AVVRETALTATALRR-AVGLAGADEVRAEIKRLIGQGTLVEAVPAYRMAERMDGPVLSSA 408 Query: 372 ----------------------------PLDREKGLFTSGIHVLDELSVRALSRDIMK-- 401 L + +T+ + E ++ A+ R Sbjct: 409 GWECFLRELKGWTEKEAHTYVGHAIKRGSLVPAEKRYTTQKALAREKAILAIERTGRGAV 468 Query: 402 ----QNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAR 457 +S AG AV + + G G G+ V + V + + Sbjct: 469 APILTAAAVKTALESSTLNAGQRSAVETIVATSNRFVGIQGDAG-TGKTYTVNQAVALIK 527 Query: 458 EQ-----GREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGSTVIVDQGEK 512 + G +A + ++E L + + + + +++D+ Sbjct: 528 QASAVSEGYRTVALAPYGNQVKAL-KNEGLEAHTLASFLRTKDK-PIDGKTIIVLDESGV 585 Query: 513 LSLKETLTLLDGAARHNVQVLITDSGQR---TGTGSALMAMKDAGVNTYRWQGGEQRPA- 568 + ++ L+ + ++++ ++ G ++ G+ T R +++ Sbjct: 586 VGARQMEQLMRTVEKAGARMVMIGDTKQTEAIEAGKPFAQLQHDGMQTARISEIQRQKDH 645 Query: 569 ----------------------TIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVRE 606 + + R+ + D+ + V+G E Sbjct: 646 ELKTAVEHAAEGRVTQSLAHLKHVEELKEPIERHRAIVNDYIGLTETDRRDTLIVAGTNE 705 Query: 607 -QAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETR- 664 + + + +R L L L+ V + R Y+PGMV++ + Sbjct: 706 ARREINRMVRESL----ELAGNGREFETLTRVDMTQAQRRFAPSYQPGMVIQPEKDYQKA 761 Query: 665 ---SHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVT 721 + Y + ++L L G T + + S++ E+ ++ G+ +R+ Sbjct: 762 GLTRGETYRVKEALP-GNALVLERQDGTTATINPRK-ATQLSVYHLERAELSVGDTVRIN 819 Query: 722 GKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTA-LKLENGWVETPGH 780 PG ++ GDR++VA V + + + + + + P L LE + T Sbjct: 820 RNDPGRDLTNGDRMRVAGVIGGVVKLESVEQRDGRPVRALELPTNRPLHLEYAYASTVHS 879 Query: 781 SV----SDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVV 836 S + + ++ N ++R+ + R+Y++ + A R T + Sbjct: 880 SQGLTNDRALIALDTKSRTTSMNLYYVAISRARYEARVYTNSVKELPAAIARRFDKTTAL 939 Query: 837 SEQIKTRAGE 846 + Q + Sbjct: 940 AIQRERELQR 949 Score = 292 bits (746), Expect = 1e-76, Method: Composition-based stats. Identities = 162/711 (22%), Positives = 252/711 (35%), Gaps = 120/711 (16%) Query: 863 PAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDV 922 PAQ + A+ + ++ L A A G E+ EI I +G L+ Sbjct: 333 PAQAVVQYAISHLTEREAVVRETALTATALRRAVGLAGADEVRAEIKRLIGQGTLVEAVP 392 Query: 923 AKGYGTG--------------------------------------------LLVSRASYE 938 A ++ + Sbjct: 393 AYRMAERMDGPVLSSAGWECFLRELKGWTEKEAHTYVGHAIKRGSLVPAEKRYTTQKALA 452 Query: 939 AEKSILRHILEGKEAVMPLMERVPGELMEK---LTSGQRAATRMILETSDRFTVVQGYAG 995 EK+IL G+ AV P++ + + L +GQR+A I+ TS+RF +QG AG Sbjct: 453 REKAILAIERTGRGAVAPILTAAAVKTALESSTLNAGQRSAVETIVATSNRFVGIQGDAG 512 Query: 996 VGKTTQFRAVMSAVNML-PESERPRVVGLGPTHRAVGEMRSAGVDAQTLASFLHDTQLQQ 1054 GKT ++ + SE R V L P V +++ G++A TLASFL Sbjct: 513 TGKTYTVNQAVALIKQASAVSEGYRTVALAPYGNQVKALKNEGLEAHTLASFL------- 565 Query: 1055 RSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRL 1114 R+ + P T+ +LDES +VG M + + G R V GDT Q +AI G+PF Sbjct: 566 RTKDKPIDGKTIIVLDESGVVGARQMEQLMRTVEKAGARMVMIGDTKQTEAIEAGKPFAQ 625 Query: 1115 QQTRSAADVAIMKEIVRQTP-ELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPE 1173 A + EI RQ EL+ AV V ++L+ L Sbjct: 626 L-QHDGMQTARISEIQRQKDHELKTAVEHAAEGRVTQSLAHL------------------ 666 Query: 1174 HSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHL 1233 K P+ + AIV DY G T R TLIV Sbjct: 667 -----------------------KHVEELKEPIERHRAIVNDYIGLTETDRRDTLIVAGT 703 Query: 1234 NEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDAL------ 1287 NE RR +N M+ + EL L ++ + R +++ Sbjct: 704 NEARREINRMVRESL----ELAGNGREFETLTRVDMTQAQRRFAPSYQPGMVIQPEKDYQ 759 Query: 1288 --VLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRM 1345 L +R+ + L+ + +G T I+PR+A V + GD + Sbjct: 760 KAGLTRGETYRVKEALPGNALVLER-QDGTTATINPRKATQLSVYHLERAE--LSVGDTV 816 Query: 1346 RFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQT----REIRPGQEQAEQHIDLAYAIT 1401 R ++D R V V G V L +Q H++ AYA T Sbjct: 817 RINRNDPGRDLTNGDRMRVAGVIGGVVKLESVEQRDGRPVRALELPTNRPLHLEYAYAST 876 Query: 1402 AHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAV 1461 H +QG + A+ T+ YVA+SR + +VYT++ + AI Sbjct: 877 VHSSQGLTNDRALIALDTKS---RTTSMNLYYVAISRARYEARVYTNSVKELPAAIARRF 933 Query: 1462 QKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSP 1512 K TA + + + + TA + + + ++ A G+ P Sbjct: 934 DKTTALAIQRERELQRRGAGMQPKGTADGKQALQRQQLEQQRKQPASGNKP 984 >UniRef50_A8ZPV0 Putative uncharacterized protein n=1 Tax=Acaryochloris marina MBIC11017 RepID=A8ZPV0_ACAM1 Length = 2018 Score = 469 bits (1207), Expect = e-130, Method: Composition-based stats. Identities = 190/895 (21%), Positives = 321/895 (35%), Gaps = 93/895 (10%) Query: 30 GERWAGRGAEQLGLQGSVDKDVFTRLLEGRLPDGADLSR-MQDGSNRHRPGYDLTFSAPK 88 +W G GA LGLQG+V + F ++ G +G L ++ ++ R G D TFS PK Sbjct: 36 RAQWYGYGAYALGLQGNVHRADFKKVFYGYNLEGERLRGFPKNEKHKERVGDDFTFSMPK 95 Query: 89 SVSMMAMLGGDKRLIDAHNQAVDFAVRQV-EALASTRVMTDGQSETVLTGNLVMALFNHD 147 S SM+ +G D RL DAH QAV + V E TRVM G T+ T NLV+AL NH Sbjct: 96 SASMVLHIGCDYRLFDAHLQAVKRTLDIVQERYGQTRVMIGGVRHTLNTKNLVIALINHH 155 Query: 148 TSRDQEPQLHTHAVVANVTQ-HNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKE 206 TSR +PQ+HTHA+V N TQ +G W++ +D + Q G++YR+ L E Sbjct: 156 TSRANDPQVHTHALVMNTTQMPDGTWRSRKND----------LMYMQECLGQIYRQYLAE 205 Query: 207 QVEALGYETEVVGKHGMWEMPGVP---VEAFSGRSQTI---REAVGEDASLKSRDVAALD 260 ++ LGY+ +E+ G+ VE FS RSQ I E G +A+ ++ A L Sbjct: 206 NIQNLGYKIYAT--KDAFEIEGITREQVETFSKRSQQIFKQLEKDGLEATTANKQTACLK 263 Query: 261 TRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQ-- 318 +RK+K+ + D++A A Q D R P + Q Q Sbjct: 264 SRKAKEP--------------GQKLTDLQAVWQQAAQTLDYRMPQPDLSPQFEYRPDQVT 309 Query: 319 -AVTQAIAGLSERKVQFTYTDVLARTVGILPPENG-VIERARAGIDEAISREQLIPLDRE 376 A+ AI LSER + FT + G + I +A + +E ++ + Sbjct: 310 TALHSAINHLSERSITFTREQIEQFVFGNIRQFRFEDISQAMSACEELLTLRDQVN---N 366 Query: 377 KGLFTSGIHVLDELSVRALSRDIMKQNRVTVHP------EKSVPRTAGYSDAVSVLAQDR 430 FT+ + E ++ + + K G +AV+ Sbjct: 367 TERFTTVAALEREAAIHQSWDLGRQTQTPLMSEYSVRELLKESGLNVGQLEAVAKTLAHS 426 Query: 431 PSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGR 490 + G G G+ + +L + ++Q A ++ + ++ + + Sbjct: 427 DQFILWHGLAGV-GKTRTLGQLKQVLTHLNLDIQGYAPTTKASKVLGKELGIKTNTVAKL 485 Query: 491 RQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR---TGTGSAL 547 + + P IVD+ + ++ L LL A N +VL ++ GS + Sbjct: 486 L--VSKPSLAPHQLWIVDEAGMIGSQQMLELLGRARAANARVLFVGDTKQNPSITAGSPM 543 Query: 548 MAMKDAGVNTYRWQGGEQRPATI--------------------------ISEPDRNVRYA 581 ++ AG T+ ++ T+ D ++R Sbjct: 544 RSLIRAGATTFHISQIVRQRNTVQKRAVSLIAKGQGLNAVSLLKEHGYIQEIKDEDIRQQ 603 Query: 582 RLAGDFAASVKAGEESVAQVS-GVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLD 640 A + V+ +E+ + +R LK +G LG + + L+ L Sbjct: 604 TFADYYLQLSPEERAETLLVTGTNKERLAIMSLLRQGLKAEGTLGEEDHHIQQLASRHLT 663 Query: 641 SRSRYLRDMYRPGMVMEQWNPETRS-----HDRYVIDRVTAQSHSLTLRDAQGETQVVRI 695 + L Y+ G ++ RS Y ++R L + + G Sbjct: 664 IEQKRLVQFYQVGDYIQLQKKNYRSTPLQKDKLYRVER--RLGDELLVSSSGGRLYHFNP 721 Query: 696 SSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEP 755 S ++ + + VA G+ LR T + S GD ++V ++ + V+ Sbjct: 722 SKYKHK-EVYEVQNLNVAVGDDLRWTHNNKEQKWSNGDEVKVVAIEGSTLHVIDEEGQH- 779 Query: 756 ATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNA-TLNGLARSGRDVRL 814 +S L S V +S ++R ++ + Sbjct: 780 --RTISLDHPVCLDYALVHTAHRAQGQSRKRVVISSTNDPTSSKEPFYVKISRQSHEIVI 837 Query: 815 YSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIH 869 Y + S S H Sbjct: 838 YCQSFKKLDERVSESIAQDNATELLKDYHEQSGSQIGHDSGAPEDYPGRTANPSH 892 Score = 309 bits (791), Expect = 6e-82, Method: Composition-based stats. Identities = 163/1054 (15%), Positives = 317/1054 (30%), Gaps = 132/1054 (12%) Query: 755 PATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRL 814 + + F + VET A Sbjct: 211 GYKIYATKDAFEIEGITREQVETFSKRSQQIFKQLEKDGLEATTANKQTAC--------- 261 Query: 815 YSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPV 874 L + E + V +Q + +S Q A+H A+ Sbjct: 262 ---LKSRKAKEPGQKLTDLQAVWQQAAQTLDYRMPQPDLSPQFEYRPDQVTTALHSAINH 318 Query: 875 VESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSR 934 + + + F+ + + F ++ ++A + L + T + Sbjct: 319 LSERSITFTREQIEQFVFGNIRQ-FRFEDISQAMSAC----EELLTLRDQVNNTERFTTV 373 Query: 935 ASYEAEKSILRHILEGKEAVMPLMERVPGELMEK---LTSGQRAATRMILETSDRFTVVQ 991 A+ E E +I + G++ PLM + K L GQ A L SD+F + Sbjct: 374 AALEREAAIHQSWDLGRQTQTPLMSEYSVRELLKESGLNVGQLEAVAKTLAHSDQFILWH 433 Query: 992 GYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM-RSAGVDAQTLASFLHDT 1050 G AGVGKT + + L + G PT +A + + G+ T+A L Sbjct: 434 GLAGVGKTRTLGQLKQVLTHL----NLDIQGYAPTTKASKVLGKELGIKTNTVAKLLVSK 489 Query: 1051 QLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQ 1110 + L+++DE+ M+G+ M A R + GDT Q +I G Sbjct: 490 PS--------LAPHQLWIVDEAGMIGSQQMLELLGRARAANARVLFVGDTKQNPSITAGS 541 Query: 1111 PFRLQQTRSAADVAIMKEIVRQTPELR-EAVYSLINRDVERALSGLESVKPSQVPRQEGA 1169 P R R+ A + +IVRQ ++ AV + A+S L+ Q + E Sbjct: 542 PMRSLI-RAGATTFHISQIVRQRNTVQKRAVSLIAKGQGLNAVSLLKEHGYIQEIKDEDI 600 Query: 1170 WAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLI 1229 + Y +PE R +TL+ Sbjct: 601 --------------------------------------RQQTFADYYLQLSPEERAETLL 622 Query: 1230 VTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVL 1289 VT N++R + S++ + G LG+E + L + ++ + R + ++ + Sbjct: 623 VTGTNKERLAIMSLLRQGLKAEGTLGEEDHHIQQLASRHLTIEQKRLVQFYQVGDYIQLQ 682 Query: 1290 VDNVYHRIAGISKDDGL-------ITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTG 1342 N K + + + + G +P + + +Y + V G Sbjct: 683 KKNYRSTPLQKDKLYRVERRLGDELLVSSSGGRLYHFNPSKYKHK--EVYEVQNLNVAVG 740 Query: 1343 DRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITA 1402 D +R+T +++E+ + V A+ G ++ + D + +D A TA Sbjct: 741 DDLRWTHNNKEQKWSNGDEVKVVAIEGSTLHVIDEEGQHRTISLDHPVC--LDYALVHTA 798 Query: 1403 HGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQ 1462 H AQG S + + E YV +SR + +Y + + + ++ ++ Sbjct: 799 HRAQGQSRKRVVI----SSTNDPTSSKEPFYVKISRQSHEIVIYCQSFKKLDERVSESIA 854 Query: 1463 KGTAHDVFEPKPDREVMNAERLF--------STARELRDVAAGRAVLRQAGLAGGDSPAR 1514 + A ++ + ++ TA ++V ++G Sbjct: 855 QDNATELLKDYHEQSGSQIGHDSGAPEDYPGRTANPSHGDGNSQSVRSRSGGENRYIEPP 914 Query: 1515 ------FIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGEGRVKGSGD 1568 + P R+ P + A R G+ + G E + Sbjct: 915 RQPGVGDVTPSRQGRTPALHRTAPRRLGRPEVGEDGGIHRQINESNGGSDPEDELLRYDL 974 Query: 1569 AQF----------VALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPGA 1618 + + E D R R + N Sbjct: 975 PATERGSGDGGRGDQVHQTTTPEQRSLDFSDAHQRQERSQLGDALAGLARSWTAYQNAQL 1034 Query: 1619 I--TGGRVWGDIPDNSVQPG----------------AGNGEPVTAEVLAQRQAEEAIRRE 1660 I +G + ++ + +T + + + I Sbjct: 1035 IVASGLDQAVNQLSEGMEEPQPPTYDMGNLAASITQRQEQQDLTEHLTQIQYVLDQIDEA 1094 Query: 1661 TERRA-DEIVRKMAENKPDLPDGKT-EQAVREIAGQERDRAAITEREAALPEGVLREPQR 1718 E+ E +R M + + A+ E+ + D + E + Sbjct: 1095 VEQVTYREQIRAMDAGLQEWQASRGLTDAIAEVEADQPDAVEHLDAALERAEAQPVLYPQ 1154 Query: 1719 VREAVREIARENLLQERLQQMERDMVRDLQKEKT 1752 ++ VR I Q+ + + Q + Sbjct: 1155 MQRLVRSIREWQSQQQLVNALAPIAETIQQLQGH 1188 >UniRef50_C0A2R1 Conjugative relaxase domain protein n=2 Tax=Opitutaceae bacterium TAV2 RepID=C0A2R1_9BACT Length = 914 Score = 469 bits (1207), Expect = e-130, Method: Composition-based stats. Identities = 163/862 (18%), Positives = 299/862 (34%), Gaps = 74/862 (8%) Query: 9 SAGSAGNYYTDK----DNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRLPDGA 64 S A Y+ + D W G+GA L L G + F L GR P Sbjct: 13 SVAGAVEYFHEHMRLADYLKQGDQSEMTWVGQGAALLSLAGPCRVNDFETLCSGRHPATG 72 Query: 65 DLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEALASTR 124 + D +R R G+ S PK VS+ ++GGD R+ +AV ++++EA+ +TR Sbjct: 73 ESLLASDKGSRRRVGFFGQISPPKDVSIACLVGGDSRIAVWWTEAVRETLQEIEAVTATR 132 Query: 125 VMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDKVGKTG 184 V +GQ+ TGN+V A+ H+ +R +PQLHTH + N+T+ + K+ Sbjct: 133 VRCEGQNHDRTTGNMVAAVVTHEANRALDPQLHTHVCIMNLTRD-------HEENRWKSV 185 Query: 185 FIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPV---EAFSGRSQTI 241 Y +Q F + +L ++ + GYE E V + + + G P E FS R I Sbjct: 186 QPSAFYRHQGFFREVCYNRLAVRLRSAGYELERV-RGIGFTIKGFPEKLRETFSKRRLAI 244 Query: 242 REAVGEDASLKSR--DVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRA 299 EA + TR K A W+ +RA AD Sbjct: 245 LEAAAASGITSQDGLQAVTVRTRADKVSATAVELQAGWIAQAGPALDLVRAVIAQADGT- 303 Query: 300 DLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARA 359 P A+ A + ER+ +L + I+ + + RA Sbjct: 304 --------PKPAPEVRPFDALVSAEEHVFERRSVVDERLLLREAL-IIGRGHVTPDDLRA 354 Query: 360 GIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHP--EKSVPRTA 417 I E ++ +LI ++ G S + E + + V + + Sbjct: 355 AIGERVASGELI---KKGGDLASRSGLEAEDEFVTWAEAHREDCGVIGYAVGLREASLGK 411 Query: 418 GYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMK 477 + AVS + R + + G G G+ + +V +G + A + ++ Sbjct: 412 DQAAAVSTVLASRSRVTVFQGDAG-TGKTHSLKTVVAAIERRGGRIFGCAPSTGATDVLR 470 Query: 478 QDERLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDS 537 ++ + E A G +IVD+ +S+++ L A ++ ++L+ Sbjct: 471 KELTPDANTLQQLLANPELQAAMRGRVIIVDEAGLMSVRQMRDLCRLADANDYRLLLVGD 530 Query: 538 GQRTG---TGSALMAMKD------AGVNTYRWQGGEQRPATIISEPD------------- 575 ++ G G AL ++ A + R Q + + D Sbjct: 531 TKQHGSVEAGDALRCLQKFANVPVARLTQIRRQKDPEFREAVADLADGNVVSAVARFRKL 590 Query: 576 --------RNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLP 627 Y+ A D+ ++V++G+ + E T +R +L+ G+L P Sbjct: 591 EAVKEIPYDRQLYSAAAKDYISTVRSGKTCLVISPVWSEIHAFTTEVRRQLRCNGLLSGP 650 Query: 628 EVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQ 687 + +T + R + Y+PG ++ E + L + Sbjct: 651 DRVVTVAWSLDWTREWRRQIENYKPGDLLRFHRDEGDFGSGEYATVSRIEDRCLVVTRHD 710 Query: 688 GETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTV 747 G + + + ++ VA G+ L V + GDR++VA ++ V Sbjct: 711 GNRTWIDPRQTG-GFDVQVAGELSVAAGDSLLVEANEKSAGLKNGDRVEVAGFDDEGSIV 769 Query: 748 VVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNAT---LNG 804 + GR + S F + + + + Sbjct: 770 LKDGR-------LIPSSFRQFTHGYASTSHGSQGKTVNRGILVMADESIATANLKQAYVS 822 Query: 805 LARSGRDVRLYSSLDETRTAEK 826 +R +Y++ + Sbjct: 823 NSRFQETQMIYTTDIDAAREAM 844 Score = 276 bits (705), Expect = 6e-72, Method: Composition-based stats. Identities = 125/630 (19%), Positives = 218/630 (34%), Gaps = 74/630 (11%) Query: 859 ALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLL 918 A A+ A V ++ LL EA +L I ++ G+L+ Sbjct: 307 APEVRPFDALVSAEEHVFERRSVVDERLLLREALIIGRGHVTPDDLRAAIGERVASGELI 366 Query: 919 YVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATR 978 G L SR+ EAE + +E ++ G L Q AA Sbjct: 367 -------KKGGDLASRSGLEAEDEFVTWAEAHREDC-GVIGYAVGLREASLGKDQAAAVS 418 Query: 979 MILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMR-SAG 1037 +L + R TV QG AG GKT + V++A+ E R+ G P+ A +R Sbjct: 419 TVLASRSRVTVFQGDAGTGKTHSLKTVVAAI----ERRGGRIFGCAPSTGATDVLRKELT 474 Query: 1038 VDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVAS 1097 DA TL L + +LQ + ++DE+ ++ M L A R + Sbjct: 475 PDANTLQQLLANPELQAA------MRGRVIIVDEAGLMSVRQMRDLCRLADANDYRLLLV 528 Query: 1098 GDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQT-PELREAVYSLINRDVERALSGLE 1156 GDT Q ++ G R Q + VA + +I RQ PE REAV L + +V A++ Sbjct: 529 GDTKQHGSVEAGDALRCLQKFANVPVARLTQIRRQKDPEFREAVADLADGNVVSAVARFR 588 Query: 1157 SVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDY 1216 ++ + + LY A +DY Sbjct: 589 KLEAVKEIPYD--------------------------------------RQLYSAAAKDY 610 Query: 1217 TGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRR 1276 T + + L+++ + + + + G L +V V + + R+ Sbjct: 611 IS-TVRSGKTCLVISPVWSEIHAFTTEVRRQLRCNGLLSGPDRVVTVAWSLDWTREWRRQ 669 Query: 1277 LSTWETHRDALVLVDNVYH----RIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLY 1332 + ++ D +D + + +GN I PR+ G + Sbjct: 670 IENYKPGDLLRFHRDEGDFGSGEYATVSRIEDRCLVVTRHDGNRTWIDPRQ--TGGFDVQ 727 Query: 1333 TPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQ 1392 + V GD + +++ G V + + + + + Sbjct: 728 VAGELSVAAGDSLLVEANEKSAGLKNGDRVEVAGFDDEGSIVLKDGR------LIPSSFR 781 Query: 1393 HIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQG 1452 YA T+HG+QG + I + E A + AYV+ SR ++ +YT + Sbjct: 782 QFTHGYASTSHGSQGKTVNRGILVMADES--IATANLKQAYVSNSRFQETQMIYTTDIDA 839 Query: 1453 WTDAINNAVQKGTAHDVFEPKPDREVMNAE 1482 +A+ + A ++ P R+ A Sbjct: 840 AREAMGRFGDRLLASELV-PPDARKPAGAR 868 >UniRef50_Q30Q32 ATP-dependent exoDNAse (Exonuclease V) alpha subunit-helicase superfamily I member-like protein n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30Q32_SULDN Length = 1112 Score = 469 bits (1205), Expect = e-130, Method: Composition-based stats. Identities = 153/904 (16%), Positives = 357/904 (39%), Gaps = 98/904 (10%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWA--GRGA---EQLGLQGSVDKDVFTRL 55 MMSI+ +S+ A NY+ +YY W G + + + Q ++ K+ + Sbjct: 1 MMSISSWQSSAQAENYFQQDLDYYQKNQELGEWHITGEMSNRYQNIAHQSAITKESYQDF 60 Query: 56 LEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDK---RLIDAHNQAVDF 112 + + + + R G+D+TFS KS+ ++ + D+ ++ A ++AV+ Sbjct: 61 ADLINQN-----LKGNATGNQRAGFDITFSPSKSIDVIYAVANDELKKSILQAQDRAVNL 115 Query: 113 AVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEW 172 A+ + + R+ + E L +A F H ++R++E ++HTH +AN T Sbjct: 116 ALEKASRYITYRMRNENGREHFQNNGLAIAKFQHLSNRNEEIKIHTHCFIANQT------ 169 Query: 173 KTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVG-KHGMWEMPGVPV 231 ++S + + +Y NQ ++Y ++L ++++ LG+++EV+ + + E+ GV Sbjct: 170 --INSKGELVSIDNKQLYDNQKLITQIYHQELFQEMQKLGFQSEVLDIQKDILEIKGVTQ 227 Query: 232 EA---FSGRSQTIREAVGED-----------ASLKSRDVAALDTRKSKQHVDPEIKMA-- 275 EA S R+ I + + E+ + R +A L+TR KQ Sbjct: 228 EARNSISTRTAEIEKWLLENRKELLRKYPNANESQLRQIATLETRNYKQSHSYSELEEIE 287 Query: 276 -EWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQF 334 + ++ TGF ++Q + + +A +E + F Sbjct: 288 LKNKNLVENTGFTKETIHQI---------QNLEKSNQKILSLDELTQKAAQLTTEHESTF 338 Query: 335 TYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRA 394 T ++L+R + + ++ + + ++ A+ +I LD ++T+ + E + Sbjct: 339 TSEEILSRAIKLNAIQSYTYD--LSTLENAVLNSDIIKLDEN--IYTTQEMINIEREILT 394 Query: 395 LSRDIMKQNRVTVH--------PEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQR 446 +++ + E TAG +A S + + ++ + G G G+ Sbjct: 395 YAQESKNTAQAETTLDKAEQFLSENFSTMTAGQKEAFSHVLTSKDAILGIQGDAGV-GKT 453 Query: 447 ERVAELVMMAREQGR-EVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGSTV 505 + + + + + +A ++ + ++ + G+ I + + Sbjct: 454 FMLKAVKEFQKLHKKDNLIGLAPTNKAADEISKESGIKGQTIDSFIHQRQHKQ---NQII 510 Query: 506 IVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR---TGTGSALMAMKDAG-------- 554 IVD+ + ++ L D A + N ++++ ++ G G+ ++ G Sbjct: 511 IVDEASMVDSRKMQKLTDIAQQTNSKLVLMGDTKQFTSIGAGAIFEQLQAKGAIEVAVMA 570 Query: 555 ---------VNTYRWQGGEQRPATIISEPDRNVRYARL-AGDFAASVKA----GEESVAQ 600 + EQ+ ++ + ++ + A D+++ VK + ++ Sbjct: 571 ESMRAKTADMKELYKLTKEQKTDAVLDILESKNQFQTIEAEDYSSVVKEYLQDKDNTLLL 630 Query: 601 VSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQ-- 658 V + + L + IR ELK + ++ + LDS S + Y G +++Q Sbjct: 631 VMKNQTRQELNELIRDELKKDNSISSHQI-LHIQEKQQLDSISVHHYTSYEVGDMVQQAG 689 Query: 659 -WNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGER 717 + +S VI V + +S+TL+DA+G ++ V + +L++ + + ++ Sbjct: 690 SYKGSLKSGTEAVIASVNEELNSITLQDAKGNSKEVNLGEHGDKLNLYKTTQKEFSQNDK 749 Query: 718 LRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVET 777 + T K L ++ GD V + + +TV + + ++ + + Sbjct: 750 IIFTKKDKSLGLNNGDIGTVKEIKDGFLTVDTGKK----EIKINTKEYNYIDHAYAITNH 805 Query: 778 PGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVS 837 + ++F ++++ NA L R+ + +Y+ E R + + Sbjct: 806 KAQGQTSERSIFVGDSRLSSQNAFYVALTRAKAHISIYTQDKEQFRDAVAERQVKRSTLD 865 Query: 838 EQIK 841 + Sbjct: 866 YNTE 869 Score = 321 bits (822), Expect = 1e-85, Method: Composition-based stats. Identities = 159/828 (19%), Positives = 309/828 (37%), Gaps = 111/828 (13%) Query: 871 ALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGL 930 A + + F+ ++L+ A A + +L + + D++ +D + Sbjct: 327 AAQLTTEHESTFTSEEILSRAIKLNAIQSYTYDLST-LENAVLNSDIIKLD------ENI 379 Query: 931 LVSRASYEAEKSILRHILEGKEAVMPL-----MERVPGELMEKLTSGQRAATRMILETSD 985 ++ E+ IL + E K E+ E +T+GQ+ A +L + D Sbjct: 380 YTTQEMINIEREILTYAQESKNTAQAETTLDKAEQFLSENFSTMTAGQKEAFSHVLTSKD 439 Query: 986 RFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM-RSAGVDAQTLA 1044 +QG AGVGKT +AV L + + ++GL PT++A E+ + +G+ QT+ Sbjct: 440 AILGIQGDAGVGKTFMLKAVKE-FQKLHKKD--NLIGLAPTNKAADEISKESGIKGQTID 496 Query: 1045 SFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQ 1104 SF+H Q +Q N + ++DE+SMV + M + + + V GDT Q Sbjct: 497 SFIHQRQHKQ---------NQIIIVDEASMVDSRKMQKLTDIAQQTNSKLVLMGDTKQFT 547 Query: 1105 AIAPGQPFRLQQTRSAADVAIMKEIVR-QTPELREAVYSLINRDVERALSGLESVKPSQV 1163 +I G F Q + A +VA+M E +R +T +++E + + L LES Q Sbjct: 548 SIGAGAIFEQLQAKGAIEVAVMAESMRAKTADMKELYKLTKEQKTDAVLDILESKNQFQT 607 Query: 1164 PRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEA 1223 E Y ++V++Y + Sbjct: 608 IEAED----------------------------------------YSSVVKEYL----QD 623 Query: 1224 REQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETH 1283 ++ TL++ N+ R+ LN +I D +K + Q++ + + + +++E Sbjct: 624 KDNTLLLVMKNQTRQELNELIRDELKKDNSISSHQILH-IQEKQQLDSISVHHYTSYEVG 682 Query: 1284 RDALV-------LVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDT 1336 L IA ++++ ITLQDA+GN++ ++ E + T Sbjct: 683 DMVQQAGSYKGSLKSGTEAVIASVNEELNSITLQDAKGNSKEVNLGEHGDKLNLYKTTQK 742 Query: 1337 IRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDL 1396 D++ FTK D+ G + TV + +T+ G++ +I + +ID Sbjct: 743 -EFSQNDKIIFTKKDKSLGLNNGDIGTVKEIKDGFLTVDTGKKEIKI---NTKEYNYIDH 798 Query: 1397 AYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDA 1456 AYAIT H AQG + +I + ++ + YVAL+R K H+ +YT +++ + DA Sbjct: 799 AYAITNHKAQGQTSERSIFVGD-----SRLSSQNAFYVALTRAKAHISIYTQDKEQFRDA 853 Query: 1457 INNAVQKGTAHDV------------------FEPKPDREVMNAERLFSTARELRDVAAGR 1498 + K + D DR ++ + +L + Sbjct: 854 VAERQVKRSTLDYNTEEILKRRANELTKIQGLHKSSDRSTAREQKTINLLHKLSNSVVVS 913 Query: 1499 AVLRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFS 1558 + R + L +A + P + G++ + + + + Sbjct: 914 NIKRLSDLLLQSDTLNNLANRFRRDANITVRPEINVVGRTQQPTIQ-IKGESMQTVYDKR 972 Query: 1559 GEGRVKGSGDAQFVALQGS---RNGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWN 1615 E K Q + Q ++ D + A + + ++ Sbjct: 973 REENAKYQEATQEINNQEGEKQNLAREQEKESFIDKIDKASELYERVEDIQRYLSDETGI 1032 Query: 1616 PGAITGGRVWGDIPDNSVQPGAGNGEPVTAEVLAQRQAEEAIRRETER 1663 IT + G + D ++ E + + + + + E Sbjct: 1033 KDIITSEQDLGVLEDMALNYDMR--EITQEALESFKHLAQDVVEVLEN 1078 >UniRef50_C5ANZ1 TrwC protein n=2 Tax=Burkholderia glumae BGR1 RepID=C5ANZ1_BURGB Length = 973 Score = 465 bits (1195), Expect = e-129, Method: Composition-based stats. Identities = 197/979 (20%), Positives = 340/979 (34%), Gaps = 145/979 (14%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGS--MGERWAGRGAEQLGLQGSVDKDVFTRLLEG 58 MMS+ V SAG A +Y++ KDNYY +W G+GA LGL G VD+ F LL G Sbjct: 1 MMSMHNVGSAGQALHYFS-KDNYYTTEQGLERSQWFGKGAAALGLDGQVDEKEFFELLSG 59 Query: 59 RLPDGADLSRMQDGSNR-----HRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFA 113 R+ G L R+ N HRPG DLTFSAPKSVS+ A + D ++ AH +AV A Sbjct: 60 RV-AGKQLGRVVRDDNGQPDWVHRPGIDLTFSAPKSVSIAAEVFEDHQVRLAHEEAVKEA 118 Query: 114 VRQVEAL-ASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH-NGE 171 + VE A R DG++ T TGN+V ALF H+TSRD +P HTHAV+ N T+ +G+ Sbjct: 119 LEYVEEYAAQARKTVDGETITEETGNIVAALFRHNTSRDLDPDTHTHAVILNATRREDGQ 178 Query: 172 WKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP- 230 W+ L++D +Y Q G +Y L ++ GY K+G +E+ GV Sbjct: 179 WRALTND---------ELYLQQKVIGAVYTASLARALQKRGYAITAPDKNGNFELVGVTR 229 Query: 231 --VEAFSGRSQTIREAVG------EDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLK 282 +E FS RS + +A+ ++ A L TR+ K+ VD + W + + Sbjct: 230 EQIEHFSQRSAARDRWLRANGIDPANATPAEKERAVLATRERKRDVDHGVLSQTWRERAQ 289 Query: 283 ETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLAR 342 G D A + A + + T A+ + A L ER++ D++ Sbjct: 290 SVGLDYGAIQAKAREAREAGTDARVVEMSGI----DALRFSAAHLGEREIVLNRYDMVKT 345 Query: 343 TVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQ 402 + + + +++ L T+ + E + + Sbjct: 346 AIEH-AVGRTSPAAILKAYGKLVEDGKIVNLPDGNI--TTEKMLNTERWTVEQALSQQGK 402 Query: 403 NRVTV-------------------HPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAA 443 T G A+ + + V G G Sbjct: 403 TPAIAPLDVVRARIDHAIEAARAERNAPDFDYTTGQRAAIELALTSEDRIVAVQGLAGV- 461 Query: 444 GQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELIT-------------GR 490 G+ V V +A E+G V+ +AA ++ + + D ++ + +T Sbjct: 462 GKTTMVKGTVQVAHERGYVVRGMAATGKAALQLAADGGINADTVTMFEIHEQRRQDDLKL 521 Query: 491 RQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSG---QRTGTGSAL 547 +VD+ L+ ++ L+ A R +V++ Q G Sbjct: 522 LHEYVPDMKREPELWLVDESSFLAQRQMARLIKMAERAEAKVILLGDKLQLQAIEAGKPF 581 Query: 548 MAMKDAGVNTYRWQGGEQRPA--------------------------------------- 568 ++D G+ T +++ Sbjct: 582 EVLQDEGLTTALMTQIQRQRNPELQQAVAITVGTADLAPDEELTSLDLSRNARAFDFLEQ 641 Query: 569 --TIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGL 626 +I PD LA + E++ ++ + AIRS+L+ +G L Sbjct: 642 AGRVIEIPDGEQLVQNLARRYVERGDRRNETIIITPFNEDRVNINNAIRSQLQARGELDT 701 Query: 627 PEVTMTA-LSPVWLDSRSRYLRDMYRPGMVMEQWNPETR----SHDRYVIDRVTAQSHSL 681 E T S + + Y M + + + + + Sbjct: 702 QESDHTIFRSESEMTRAKQKEAQYYTTDMTVRFGRDYQKILAARGEYMTVVATRPDEGIV 761 Query: 682 TLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVS 741 LR A G + ++ E+ +A + +R T V G V S+ Sbjct: 762 VLRKADGSLMEWEPKKYN-RVEIYLSEERALAARDVIRFTRGDEL--VKNGHEATVVSIQ 818 Query: 742 EDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVF------------ 789 + + E +P G + + Sbjct: 819 GSQAILRLADGKE---IPWDLDAQRHWDHAYAVTVHAGQGATREQAILHIPSEKLGRDPD 875 Query: 790 ---------ASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQI 840 +V ++ D + G+ R+ D+++Y++ ET + + Sbjct: 876 DPRRQSDIAMTVRRIFGDRSFYVGITRAVDDLQIYTTGAETARWAVSQHQDKSSALQTLR 935 Query: 841 KTRAGETSLETAISHQKSA 859 + + + + +A Sbjct: 936 EHEEAQLANPSLQPQPVNA 954 Score = 277 bits (707), Expect = 4e-72, Method: Composition-based stats. Identities = 139/674 (20%), Positives = 245/674 (36%), Gaps = 91/674 (13%) Query: 858 SALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDL 917 + A+ + + +++ + D++ A A T + ++ G + Sbjct: 313 RVVEMSGIDALRFSAAHLGEREIVLNRYDMVKTAIEHAVGRTSPAAILKAYGKLVEDGKI 372 Query: 918 LYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKE-------------AVMPLMERVPGE 964 + + G + + E+ + L + + +E E Sbjct: 373 VNLP------DGNITTEKMLNTERWTVEQALSQQGKTPAIAPLDVVRARIDHAIEAARAE 426 Query: 965 L---MEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVV 1021 T+GQRAA + L + DR VQG AGVGKTT + + V Sbjct: 427 RNAPDFDYTTGQRAAIELALTSEDRIVAVQGLAGVGKTTMVKGTVQV----AHERGYVVR 482 Query: 1022 GLGPTHRAVGEMR-SAGVDAQTLASFLHDTQLQQRSGE-------TPDFSNTLFLLDESS 1073 G+ T +A ++ G++A T+ F Q +Q + L+L+DESS Sbjct: 483 GMAATGKAALQLAADGGINADTVTMFEIHEQRRQDDLKLLHEYVPDMKREPELWLVDESS 542 Query: 1074 MVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQT 1133 + MAR + + + GD QLQAI G+PF + Q A+M +I RQ Sbjct: 543 FLAQRQMARLIKMAERAEAKVILLGDKLQLQAIEAGKPFEVLQDE-GLTTALMTQIQRQR 601 Query: 1134 -PELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQ 1192 PEL++AV + L S+ S+ R V E Sbjct: 602 NPELQQAVAITVGTADLAPDEELTSLDLSRNARAFDFLEQAGRVIEIPD----------- 650 Query: 1193 KAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAG 1252 L + + R Y R + R +T+I+T NEDR +N+ I + G Sbjct: 651 ------------GEQLVQNLARRYVERG-DRRNETIIITPFNEDRVNINNAIRSQLQARG 697 Query: 1253 ELGKEQVMVPVLNTANIRDGELRRLSTWETHR---------DALVLVDNVYHRIAGISKD 1303 EL ++ + + + ++ + + T ++ Y + D Sbjct: 698 ELDTQESDHTIFRSESEMTRAKQKEAQYYTTDMTVRFGRDYQKILAARGEYMTVVATRPD 757 Query: 1304 DGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWT 1363 +G++ L+ A+G+ P++ V +Y + + D +RFT+ D T Sbjct: 758 EGIVVLRKADGSLMEWEPKKYN--RVEIYLSEERALAARDVIRFTRGDE--LVKNGHEAT 813 Query: 1364 VTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTE--- 1420 V ++ G L P A++H D AYA+T H QGA+ AI +E Sbjct: 814 VVSIQGSQAILRLADGKE--IPWDLDAQRHWDHAYAVTVHAGQGATREQAILHIPSEKLG 871 Query: 1421 -------------GNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAH 1467 + + G S YV ++R +Q+YT + A++ K +A Sbjct: 872 RDPDDPRRQSDIAMTVRRIFGDRSFYVGITRAVDDLQIYTTGAETARWAVSQHQDKSSAL 931 Query: 1468 DVFEPKPDREVMNA 1481 + ++ N Sbjct: 932 QTLREHEEAQLANP 945 >UniRef50_A0B527 TrwC protein n=3 Tax=Burkholderiales RepID=A0B527_BURCH Length = 964 Score = 463 bits (1190), Expect = e-128, Method: Composition-based stats. Identities = 196/966 (20%), Positives = 342/966 (35%), Gaps = 143/966 (14%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGS--MGERWAGRGAEQLGLQGSVDKDVFTRLLEG 58 MMS+ V SAG A +Y++ KDNYY W G+GA LGL G VD++VF +LL G Sbjct: 1 MMSMHNVGSAGQALHYFS-KDNYYTTDQGLEHSAWFGKGAATLGLNGQVDRNVFFKLLSG 59 Query: 59 RLPDGA----DLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAV 114 ++ D L + HRPG DLTFSAPKSVS+ A + D+ + AH +AV A+ Sbjct: 60 QVGDQQLGRVVLDENGEPEVVHRPGIDLTFSAPKSVSIAAEVFEDREVRLAHEEAVKEAL 119 Query: 115 RQVEALAS-TRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH-NGEW 172 VEA + R DGQ+ TGN+V ALF H+TSRD +P HTHA+V N TQ +GEW Sbjct: 120 EYVEAYVARARKTVDGQTLVEPTGNVVAALFRHNTSRDLDPDTHTHALVMNATQRADGEW 179 Query: 173 KTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP-- 230 ++L++D +Y Q G +Y L ++ GY ++G +E+ GV Sbjct: 180 RSLTND---------ELYVQQKVIGAIYTSSLARGLQKRGYAITAPDENGNFELVGVTRE 230 Query: 231 -VEAFSGRSQTIREAVG------EDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKE 283 +E FS RS + +A+ ++ A L TR+ K VD E +W + + Sbjct: 231 QIEHFSQRSAARDRWLRANGIDPANATAAEKERAVLATRERKVGVDHEALSVQWRERAQA 290 Query: 284 TGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLART 343 G D + A + + T +A+ A + L ER++ D++ Sbjct: 291 VGLDYSVIQQKAREAREAGTDARVVKLSGI----EALRFAASHLGEREIVLNQYDLVQTA 346 Query: 344 VGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQN 403 + + + + + +++ L T+ + E + Sbjct: 347 LEH-AVGRTSPNQILDAYKKLVHQGKIVDLPDGNI--TTEKMLNTERWTVENALAQRDVT 403 Query: 404 RVTVHPE-------------------KSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAG 444 E + T G A+ R + V G G G Sbjct: 404 PAIAPAELVRSRIEQAIATARAERNDPTFDYTPGQRGAIEHALTGRDRIVAVQGLAGV-G 462 Query: 445 QRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMA------ 498 + V V +A EQG V+ +AA ++ ++ D + + +T + Sbjct: 463 KTTMVKGTVQVAHEQGWLVRGMAATGQAAKQLENDSGIQADTVTMFEIHEQRRQDDLKVL 522 Query: 499 -------FTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSG---QRTGTGSALM 548 +VD+ L+ ++ L A R + +V++ Q G Sbjct: 523 REYVPDLSRERELWLVDESSFLAQRQMARLFKMAERADAKVILLGDRLQLQAIEAGKPFE 582 Query: 549 AMKDAGVNTYRWQGGEQRPA---------------------------------------- 568 ++D GV T + +++ Sbjct: 583 ILQDEGVATAQMTQIQRQKNPELQQAVAITVGTADLAPDEPLTDLNLARNARAFDFLEQA 642 Query: 569 -TIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLP 627 + D +A + +++ ++ + A+R+EL+ +G L + Sbjct: 643 GRVTEHEDPRDLIDLMARQYVDRGPRRNQTIIITPFNEDRVEINNAVRAELQERGELDVN 702 Query: 628 EVTMTA-LSPVWLDSRSRYLRDMYRPGMVMEQWNPETR----SHDRYVIDRVTAQSHSLT 682 + T S + + Y M + + + + + Sbjct: 703 DSAHTIFRSDGDMTRAKQKEAQYYTKDMTVRFGRDYQKILASRGEYMRVVGTRPDEGIVV 762 Query: 683 LRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSE 742 LR + G + ++ E +A + +R T V G V SV+E Sbjct: 763 LRKSDGSLMEWEPKKYN-RVEVYLSETRNLAARDVIRFTRGDEL--VKNGHEATVVSVNE 819 Query: 743 DAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSA---------------- 786 + + + E +P G + Sbjct: 820 NQAVLRLADGKE---IPWDLDAQRHWDHAYAVTVHAGQGATREQAMLHIPSHKMERDPED 876 Query: 787 -----TVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIK 841 V +V ++ D + GL R+ D++++++ A + + + Sbjct: 877 ARRQSDVAMTVRRIFGDRSFYVGLTRAVEDLQIFTTDAILARAAVSRHQDKSSAIETLRE 936 Query: 842 TRAGET 847 GE Sbjct: 937 HELGEQ 942 Score = 284 bits (725), Expect = 3e-74, Method: Composition-based stats. Identities = 132/656 (20%), Positives = 243/656 (37%), Gaps = 89/656 (13%) Query: 868 IHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYG 927 + A + +++ + DL+ A A T ++ + +G ++ + Sbjct: 323 LRFAASHLGEREIVLNQYDLVQTALEHAVGRTSPNQILDAYKKLVHQGKIVDLP------ 376 Query: 928 TGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEK----------------LTS 971 G + + E+ + + L ++ + + T Sbjct: 377 DGNITTEKMLNTERWTVENALAQRDVTPAIAPAELVRSRIEQAIATARAERNDPTFDYTP 436 Query: 972 GQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVG 1031 GQR A L DR VQG AGVGKTT + + + V G+ T +A Sbjct: 437 GQRGAIEHALTGRDRIVAVQGLAGVGKTTMVKGTVQV----AHEQGWLVRGMAATGQAAK 492 Query: 1032 EMR-SAGVDAQTLASFLHDTQLQQRSGE-------TPDFSNTLFLLDESSMVGNTDMARA 1083 ++ +G+ A T+ F Q +Q + L+L+DESS + MAR Sbjct: 493 QLENDSGIQADTVTMFEIHEQRRQDDLKVLREYVPDLSRERELWLVDESSFLAQRQMARL 552 Query: 1084 YALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSL 1143 + + + + GD QLQAI G+PF + Q A M +I RQ + ++ Sbjct: 553 FKMAERADAKVILLGDRLQLQAIEAGKPFEILQDE-GVATAQMTQIQRQKNPELQQAVAI 611 Query: 1144 INRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPD 1203 AP+ +T+ + ++ A+ + ++A E + Sbjct: 612 TVG--------------------TADLAPDEPLTDLNLARNARAFDFLEQAGRVTE--HE 649 Query: 1204 VPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPV 1263 P L + + R Y R P R QT+I+T NEDR +N+ + ++ GEL + Sbjct: 650 DPRDLIDLMARQYVDRGPR-RNQTIIITPFNEDRVEINNAVRAELQERGELDVNDSAHTI 708 Query: 1264 LNT-ANIRDGELRRLSTWETHRDALVLV--------DNVYHRIAGISKDDGLITLQDAEG 1314 + ++ + + + Y R+ G D+G++ L+ ++G Sbjct: 709 FRSDGDMTRAKQKEAQYYTKDMTVRFGRDYQKILASRGEYMRVVGTRPDEGIVVLRKSDG 768 Query: 1315 NTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTL 1374 + P++ V +Y +T + D +RFT+ D TV +V+ + L Sbjct: 769 SLMEWEPKKYN--RVEVYLSETRNLAARDVIRFTRGDE--LVKNGHEATVVSVNENQAVL 824 Query: 1375 SDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTE-------------- 1420 P A++H D AYA+T H QGA+ A+ + Sbjct: 825 RLADGKE--IPWDLDAQRHWDHAYAVTVHAGQGATREQAMLHIPSHKMERDPEDARRQSD 882 Query: 1421 --GNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKP 1474 + + G S YV L+R + +Q++T + A++ K +A + Sbjct: 883 VAMTVRRIFGDRSFYVGLTRAVEDLQIFTTDAILARAAVSRHQDKSSAIETLREHE 938 >UniRef50_Q2NKF7 TrwC protein n=6 Tax=Proteobacteria RepID=Q2NKF7_ECOLX Length = 966 Score = 462 bits (1189), Expect = e-128, Method: Composition-based stats. Identities = 188/942 (19%), Positives = 351/942 (37%), Gaps = 131/942 (13%) Query: 1 MMS--IAQVRSAGSAGNYYTD-KDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLE 57 M+S + + G A +YY D D+YY W G+GAE+LGL G VD F LL Sbjct: 1 MLSHMVLTRQDIGRAASYYEDGADDYYAKDGDASEWQGKGAEELGLSGEVDSKRFRELLA 60 Query: 58 GRLPDGADLSR-MQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQ 116 G + +G + R ++ R G DLTFSAPKSVS+ A++ GD +I AH++AV + Q Sbjct: 61 GNIGEGHRIMRSATRQDSKERIGLDLTFSAPKSVSLQALVAGDAEIIKAHDRAVARTLEQ 120 Query: 117 VEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVT-QHNGEWKTL 175 EA A R G++ TGNLV+ F H+TSR+++PQLHTHAV+ N+T + +G+W+ L Sbjct: 121 AEARAQARQKIQGKTRIETTGNLVIGKFRHETSRERDPQLHTHAVILNMTKRSDGQWRAL 180 Query: 176 SSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP---VE 232 +D + G +Y +L +++ LGY+ GK G +++ + +E Sbjct: 181 KND---------EIVKRTRYLGAVYNAELAHELQKLGYQLRY-GKDGNFDLAHIDRQQIE 230 Query: 233 AFSGRSQTIREAVGEDA------SLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGF 286 FS R++ I E SL+ + A + +R K VD E AEW T KE G Sbjct: 231 GFSKRTEQIAEWYAARGLDPNSVSLEQKQAAKVLSRAKKTSVDREALRAEWQATAKELGI 290 Query: 287 DIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGI 346 D + ++ ++AV AI L+ER+ +++ + Sbjct: 291 DFSRREWSGREKGGSEKQAHSF-MPSDEAAKRAVRYAINHLTERQSVMDERELVDTAMKH 349 Query: 347 ----------------------------------------------------LPPENGVI 354 L + Sbjct: 350 AVGAARLEDIQKELLRQTETGYLIREAPRYRPGGQTGPTDEPGKTRAEWVAELAAKGMKQ 409 Query: 355 ERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTV------H 408 AR +D AI L+P++ +T+ + E + + RD + Sbjct: 410 GAARERVDNAIKTGGLVPIEP---RYTTQTALEREKRILQIERDGRGAVAPVIAAEAARE 466 Query: 409 PEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAA 468 S G +A ++ + V G G G+ + M +G V+ +AA Sbjct: 467 RLASTNLNQGQREAAELIVSAANRVVGVQGFAG-TGKSHMLDTAKQMIEGEGYHVRALAA 525 Query: 469 DRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARH 528 +++ + + + + +++D+ + + L A + Sbjct: 526 YGSQVKALRE-LNVEANTLASFL-RAKDKNIDSRTVLVIDEAGVVPTRLMEQTLKLAEKA 583 Query: 529 NVQVLITDSGQR---TGTGSALMAMKDAGVNTYRWQGGEQRPAT---------------- 569 +V++ + G ++ AG+ T + +++ Sbjct: 584 GARVVLMGDTAQTKAIEAGRPFDQLQAAGMQTAHMREIQRQKNPELKIAVELAAAGKASS 643 Query: 570 -------IISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVRE-QAILTQAIRSELKTQ 621 + + + R A +A + A + VSG E + + Q +R L T Sbjct: 644 SLERIKDVTEIKNHHERRAAVAEAYIALKPDERDRTLIVSGTNEARREINQIVREGLGTA 703 Query: 622 GVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETR----SHDRYVIDRVTAQ 677 G + L V R Y+ G V++ + + Y + Sbjct: 704 G----KGIEFDTLVRVDTTQAERRHSKNYQVGHVIQPERDYAKTGLQRGELYRVVETGPG 759 Query: 678 SHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQV 737 + + + G+ + + S+++PE+ +A G+ +R+T L ++ GDR++V Sbjct: 760 NRLTVIGEHDGQRIQFSPMTH-TKISVYQPERAELAVGDTIRITRNDKHLDLANGDRMKV 818 Query: 738 ASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASV--TQM 795 +V + +TV R + + + ++ + + ++ Sbjct: 819 VAVEDRKVTVTDGKR----NVELPTDKPLHVDHAYATTVHSSQGLTSDRVLIDAHAESRT 874 Query: 796 AMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVS 837 + ++R+ + R++++ A + Sbjct: 875 TRKDVYYVAISRARFEARVFTNDRGKLPAAIARENIKSAAHD 916 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 154/749 (20%), Positives = 257/749 (34%), Gaps = 123/749 (16%) Query: 818 LDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVES 877 E AE A + + + E +H A++A+ A+ + Sbjct: 273 DREALRAEWQATAKELGIDFSRREWSGREKGGSEKQAHSFMPSDEAAKRAVRYAINHLTE 332 Query: 878 KKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYG---------- 927 ++ +L+ A A ++ E+ Q + G L+ G Sbjct: 333 RQSVMDERELVDTAMKHAVGAARLEDIQKELLRQTETGYLIREAPRYRPGGQTGPTDEPG 392 Query: 928 ------------------------------------TGLLVSRASYEAEKSILRHILEGK 951 ++ + E EK IL+ +G+ Sbjct: 393 KTRAEWVAELAAKGMKQGAARERVDNAIKTGGLVPIEPRYTTQTALEREKRILQIERDGR 452 Query: 952 EAVMPLMERVPGELME---KLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSA 1008 AV P++ L GQR A +I+ ++R VQG+AG GK+ Sbjct: 453 GAVAPVIAAEAARERLASTNLNQGQREAAELIVSAANRVVGVQGFAGTGKSHML----DT 508 Query: 1009 VNMLPESERPRVVGLGPTHRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFL 1068 + E E V L V +R V+A TLASFL R+ + S T+ + Sbjct: 509 AKQMIEGEGYHVRALAAYGSQVKALRELNVEANTLASFL-------RAKDKNIDSRTVLV 561 Query: 1069 LDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKE 1128 +DE+ +V M + L G R V GDT Q +AI G+PF Q + A M+E Sbjct: 562 IDEAGVVPTRLMEQTLKLAEKAGARVVLMGDTAQTKAIEAGRPF-DQLQAAGMQTAHMRE 620 Query: 1129 IVRQ-TPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKL 1187 I RQ PEL+ AV +L ++ V Sbjct: 621 IQRQKNPELKIAVELAAAGKASSSLERIKDV----------------------------- 651 Query: 1188 AEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDV 1247 A+ Y P+ R++TLIV+ NE RR +N ++ + Sbjct: 652 ------------TEIKNHHERRAAVAEAYIALKPDERDRTLIVSGTNEARREINQIVREG 699 Query: 1248 REKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDAL--------VLVDNVYHRIAG 1299 AG+ + L + E R ++ L +R+ Sbjct: 700 LGTAGK----GIEFDTLVRVDTTQAERRHSKNYQVGHVIQPERDYAKTGLQRGELYRVVE 755 Query: 1300 ISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVAN 1359 + L + + +G SP +++Y P+ + GD +R T++D+ Sbjct: 756 TGPGNRLTVIGEHDGQRIQFSPM--THTKISVYQPERAELAVGDTIRITRNDKHLDLANG 813 Query: 1360 SVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGT 1419 V AV VT++DG++ E+ + H+D AYA T H +QG + + Sbjct: 814 DRMKVVAVEDRKVTVTDGKRNVELPTDKPL---HVDHAYATTVHSSQGLTSDRVLIDAHA 870 Query: 1420 EGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVM 1479 E + YVA+SR + +V+T++R AI K AHD+ + R Sbjct: 871 ES---RTTRKDVYYVAISRARFEARVFTNDRGKLPAAIARENIKSAAHDLARDRGGRSAA 927 Query: 1480 NAERLFSTARELRDVAAGRAVLRQAGLAG 1508 + R+ + + A Sbjct: 928 AERQREQQRERERNRQTQQPAHDRQKAAR 956 >UniRef50_D2QCL6 Conjugative relaxase domain protein n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QCL6_9SPHI Length = 919 Score = 462 bits (1187), Expect = e-128, Method: Composition-based stats. Identities = 162/918 (17%), Positives = 332/918 (36%), Gaps = 79/918 (8%) Query: 4 IAQVRSAGSAGNYYTD---KDNYYVLGSM-GERWAGRGAEQLGLQGSVDKDVFTRLLEGR 59 + Q SA A +Y++ K +YY+ G+ AE+LGL G V+KDVF L + Sbjct: 1 MIQSHSASGAKSYFSQALAKADYYLNDQELQGVMHGKLAERLGLTGPVNKDVFFDLCDNV 60 Query: 60 LPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEA 119 P + +R GYD+ F PK +S++ L D +++A ++V ++ +E Sbjct: 61 NPATGKSMTPRTNEHRTV-GYDINFHCPKELSILHALSNDLHILEAFQKSVSETMQDIER 119 Query: 120 LASTRVMTDGQSETVLTGNLVMALFNHDTSRD-----QEPQLHTHAVVANVTQHNGEWKT 174 A TRV D TG L+ + F H T+R +P LH H V N T Sbjct: 120 DAKTRVRKDKSVAERDTGELLYSTFIHQTARPVAGHLPDPHLHAHCFVFNATWD------ 173 Query: 175 LSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP---V 231 + ++ K ++ + + + ++L + + GY+ K + + GVP V Sbjct: 174 -AEEQQIKAVQFRDINRDMPYYQARFHKRLSDNLIEQGYQIRRTDK--AFSVDGVPQRVV 230 Query: 232 EAFSGRSQTIREAVGEDASLKSRDVAALDTRKSKQH---VDPEIKMAEWMQTLKETGFDI 288 + FS R+ I E ++ AL R + AEW + ++E G D Sbjct: 231 DLFSKRTNEIGRIAKEKGITDIDELGALGARTRSKKQVGHTMAELKAEWRKQIQEFGPD- 289 Query: 289 RAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILP 348 D D + +R + + + V A+ ER +LA Sbjct: 290 ----DEGDGKRIVRFA--PVRNPSDLTLDRCVDHALDHGFERASVVQDRRLLASAYRHSV 343 Query: 349 PENGVIERARAGIDEAISREQLIPLDREKGLF-TSGIHVLDELSVRALSRDIMKQNRVTV 407 + + A D+ + E+LI + + T+ + +E + +L+R + + Sbjct: 344 GTSSLT--LDAITDKFTNDERLIHVKEHDRVLCTTKQVLAEEARMVSLARAGQGKLKPLY 401 Query: 408 HPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIA 467 + +DAV + ++I+ G G +G+ + E + ++ G+ V ++A Sbjct: 402 QKAPDLTLDGQQADAVKHVLTTTHRVSIIRGAAG-SGKTTLMREALDHMKQAGKTVTVVA 460 Query: 468 ADRRSQMNMKQDERL-SGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAA 526 + + +DE E + + VD+ L ++ LL A Sbjct: 461 PTSEASRGVLRDEGFAEAETVAKLLSDKSMQDQLDNQILWVDEAGLLGTQDMTALLALAQ 520 Query: 527 RHNVQVLITDSGQRTGT---GSALMAM------KDAGVNTYRWQGGEQRPATIISEPDRN 577 N ++++ ++ + G AL + + A V+ Q + + Sbjct: 521 EKNARLILGGDTKQHASVVRGDALRILNTVGGIQTAEVSKIYRQRNADYRTAVEYLANGA 580 Query: 578 VR--------------------YARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSE 617 ++ + L D+ A++K G+ ++ + +T+ IR + Sbjct: 581 IKQGFEKLDSINAIQTSDPLKPHDTLVKDYMATIKKGKSALVVSPTHQNSDAVTEVIREK 640 Query: 618 LKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNP--ETRSHDRYVIDRVT 675 +K G+LG + + L+ + L + + G +++ + R++I+ Sbjct: 641 MKATGMLGKKDYLLPRLTSLNLTEAEKADWRNLKTGQLIQFNQNLPGIKRGSRWIIE--N 698 Query: 676 AQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGL---RVSGG 732 + + +++ + + + + + ++ + +A G+ +R+T R++ G Sbjct: 699 SSDKGVFIQNEE-KQILPLPTLKSRDFDVYNRSDINLAKGDTIRITRNGFDQEKNRLNNG 757 Query: 733 DRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVF--- 789 L V S+S++ V ++ DS + L + Sbjct: 758 QLLDVLSISKNGELHVRNRTSKADYKL--DSQYGHLTHAYCITSHAAQGKTVDEVFITQP 815 Query: 790 ASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSL 849 AS ++R R+Y+ E + + Sbjct: 816 ASTFPATDAKQFYVSVSRGRDRARIYTDDKEQLLDHAARLGDRPSASELVKRKNQTVDMA 875 Query: 850 ETAISHQKSALHTPAQQA 867 + I S A + Sbjct: 876 QQRIRDDLSRTTDRASRP 893 Score = 301 bits (770), Expect = 2e-79, Method: Composition-based stats. Identities = 118/664 (17%), Positives = 237/664 (35%), Gaps = 68/664 (10%) Query: 832 SFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEA 891 + E G+ + ++ + + AL + LL A Sbjct: 279 WRKQIQEFGPDDEGDGKRIVRFAPVRNPSDLTLDRCVDHALDHGFERASVVQDRRLLASA 338 Query: 892 KSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGK 951 + + T L + L++V K + L ++ E ++ G+ Sbjct: 339 YRHSVGTSSLT-LDAITDKFTNDERLIHV---KEHDRVLCTTKQVLAEEARMVSLARAGQ 394 Query: 952 EAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNM 1011 + PL L Q A + +L T+ R ++++G AG GKTT R + + Sbjct: 395 GKLKPL---YQKAPDLTLDGQQADAVKHVLTTTHRVSIIRGAAGSGKTTLMREALDHMKQ 451 Query: 1012 LPESERPRVVGLGPTHRAVG-EMRSAGV-DAQTLASFLHDTQLQQRSGETPDFSNTLFLL 1069 V + PT A +R G +A+T+A L D +Q + N + + Sbjct: 452 A----GKTVTVVAPTSEASRGVLRDEGFAEAETVAKLLSDKSMQDQ------LDNQILWV 501 Query: 1070 DESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEI 1129 DE+ ++G DM AL R + GDT Q ++ G R+ T A + +I Sbjct: 502 DEAGLLGTQDMTALLALAQEKNARLILGGDTKQHASVVRGDALRILNTVGGIQTAEVSKI 561 Query: 1130 VRQT-PELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLA 1188 RQ + R AV L N +++ L+S+ Q Sbjct: 562 YRQRNADYRTAVEYLANGAIKQGFEKLDSINAIQTS------------------------ 597 Query: 1189 EAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVR 1248 P+ ++ +V+DY + + +V+ +++ + +I + Sbjct: 598 ---------------DPLKPHDTLVKDYMATIKKGKSAL-VVSPTHQNSDAVTEVIREKM 641 Query: 1249 EKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVD--NVYHRIAGISKDDGL 1306 + G LGK+ ++P L + N+ + E +T + + + I ++ Sbjct: 642 KATGMLGKKDYLLPRLTSLNLTEAEKADWRNLKTGQLIQFNQNLPGIKRGSRWIIENSSD 701 Query: 1307 ITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKS---DRERGYVANSVWT 1363 + +++ + +Y I + GD +R T++ + + Sbjct: 702 KGVFIQNEEKQILPLPTLKSRDFDVYNRSDINLAKGDTIRITRNGFDQEKNRLNNGQLLD 761 Query: 1364 VTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNR 1423 V ++S + L +T + + H+ AY IT+H AQG + + Sbjct: 762 VLSISKNG-ELHVRNRTSKADYKLDSQYGHLTHAYCITSHAAQGKTVDEVFITQPASTFP 820 Query: 1424 KLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAER 1483 + YV++SR + ++YTD+++ D + +A ++ + K M +R Sbjct: 821 A--TDAKQFYVSVSRGRDRARIYTDDKEQLLDHAARLGDRPSASELVKRKNQTVDMAQQR 878 Query: 1484 LFST 1487 + Sbjct: 879 IRDD 882 >UniRef50_B8HZ01 Conjugative relaxase domain protein n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HZ01_CYAP4 Length = 1665 Score = 461 bits (1185), Expect = e-127, Method: Composition-based stats. Identities = 184/934 (19%), Positives = 341/934 (36%), Gaps = 111/934 (11%) Query: 1 MMSIAQVRSAGSAG-NYYTDKD-------NYYVLGSMGER-----------WAGRGAEQL 41 M S+ + S +YYT + +YY + W G+GA +L Sbjct: 1 MRSLHTITSGHQEKEDYYTQDESLCDGQADYYGQSAQSTTESSVQSLTQALWYGKGAARL 60 Query: 42 GLQGSVDKDVFTRLLEGRLPDGADLSR--MQDGSNRHRPGYDLTFSAPKSVSMMAMLGGD 99 GL G V + F + G P G + R + + R +DLT SAPKSVSM LGGD Sbjct: 61 GLVGIVQRQDFQSVFYGDQPGGQERIRGERPNPDTKERLAHDLTLSAPKSVSMTLHLGGD 120 Query: 100 KRLIDAHNQAVDFAVRQVE-ALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHT 158 +RL AH +AV + VE A TRV DG+ + TG+L+ A+ H TSR+ + QLH Sbjct: 121 ERLFQAHLEAVQETLDLVESRYAQTRVQIDGERRVMRTGHLIAAILPHHTSREGDLQLHC 180 Query: 159 HAVVANVT-QHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEV 217 H V+ N T +G W++L + N G YR +L ++V+ LGY + Sbjct: 181 HCVLMNGTFCPDGNWRSLWHEG----------MVNAEWLGSYYRLRLAQKVQDLGYAIDE 230 Query: 218 V--GKHGMWEMPGVP---VEAFSGRSQTIREAVGED---ASLKSRDVAALDTRKSKQ-HV 268 + G +E+ G +EAFS RS+ I + + + +RD A L TRK+KQ Sbjct: 231 TRLEQGGAFEIQGYSREAIEAFSKRSRQIVAYLEQHRQCVNSATRDGAVLTTRKAKQMEG 290 Query: 269 DPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLS 328 E A W G + + ++ + AI LS Sbjct: 291 TLEDYQARWRLEANVLGIN------------AVLPQAQPVTLYGYGTAREELASAIRHLS 338 Query: 329 ERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLD 388 ER V F+ D+ + + + I + A I E ++ LIP+ G FT+ + Sbjct: 339 ERSVSFSREDLYSSVFDRI--QAFDIAQLDAVIAE---QKDLIPVQ--GGRFTTVTALER 391 Query: 389 ELSVRALSRDIMKQNRVTVHPEKS------VPRTAGYSDAVSVLAQDRPSLAIVSGQGGA 442 E++ + + + +G + A++ + I+ G G Sbjct: 392 EITTLRDWMQGQGKTTPLMDETTAQALLERSALNSGQATAIAGIVSAGDQHLILHGLSGV 451 Query: 443 AGQRERVAELVMMAREQGRE--VQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFT 500 G+ + EL + +E + ++ + + + Q ++S + +L+ Sbjct: 452 -GKTTALRELKRLIQESDSKPDIRGYSPTIAAAATLAQSLQISTSTVESL--VLKPPEPL 508 Query: 501 PGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR---TGTGSALMAMKDAGVNT 557 I+D+ +S ++ +L A ++L+ ++ GS + ++ G T Sbjct: 509 ADQLWIIDEAGMISARQMAIILKKANAVGARLLLVGDPRQNPAIEAGSPMRSLIQHGATT 568 Query: 558 YRWQGGEQRPATIIS--------------------------EPDRNVRYARLAGDFAASV 591 + + ++ + D R +A + Sbjct: 569 FSLREIIRQQNAVQRRAVELMATGHPVHALSLLTEHGYVQEISDPQARSQAIAHQWLTLS 628 Query: 592 KAGEESVAQVS-GVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMY 650 + ++ V+ E+ + Q +R L+ + LG + L L + + + Y Sbjct: 629 DSERQNTLIVTGTNAERRAIHQQLRRGLRDEEGLG-EDQLFRQLINRQLTTEQKLRWENY 687 Query: 651 RPGMVMEQWNPETRS--HDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPE 708 R G + + + V + L + G + +F+ Sbjct: 688 RVGDYIRLHRNYESTLLGKGRLYQVVGIRDRQLLVESEGGRLLWFDPARY-RDKEVFKTG 746 Query: 709 KMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTAL 768 ++ +A GE+LR T G ++ V +++D +TVV E Sbjct: 747 EIAIAPGEQLRWTLTDRKTGQINGSQVSVREINDDHLTVVDDQGQEWRINGRLPLTLDYA 806 Query: 769 KLENGWVETPGHSVSDSATVFASV-TQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKL 827 + + ++ + ++ + ++R R++++Y D E + Sbjct: 807 HVTTAYSA---QGLTAERVIVSATNNPTSAQEPFYVKISRQVRELQIYV-EDLEGLREWV 862 Query: 828 ARHPSFTVVSEQIKTRAGETSLETAISHQKSALH 861 R + E I + + + Sbjct: 863 GRSVAQMNPLELIGGHDVKRERQFGATGAHDEPE 896 Score = 383 bits (983), Expect = e-104, Method: Composition-based stats. Identities = 173/995 (17%), Positives = 332/995 (33%), Gaps = 110/995 (11%) Query: 782 VSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSS--LDETRTAEKLARHPSFTVVSEQ 839 S + ++ + R + L + + + Sbjct: 242 QGYSREAIEAFSKRSRQIVAYLEQHRQCVNSATRDGAVLTTRKAKQMEGTLEDYQARWRL 301 Query: 840 IKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGT 899 G ++ + A++ + A+ + + ++FS DL + Sbjct: 302 EANVLGINAVLPQAQPVTLYGYGTAREELASAIRHLSERSVSFSREDLYSSVFDRI---- 357 Query: 900 GFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLME 959 + + G + + E E + LR ++G+ PLM+ Sbjct: 358 ------QAFDIAQLDAVIAEQKDLIPVQGGRFTTVTALEREITTLRDWMQGQGKTTPLMD 411 Query: 960 RVPGELMEK---LTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESE 1016 + + + L SGQ A I+ D+ ++ G +GVGKTT R + + Sbjct: 412 ETTAQALLERSALNSGQATAIAGIVSAGDQHLILHGLSGVGKTTALRELKRLIQE--SDS 469 Query: 1017 RPRVVGLGPTHRAVGEMRSA-GVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMV 1075 +P + G PT A + + + T+ S + ++ L+++DE+ M+ Sbjct: 470 KPDIRGYSPTIAAAATLAQSLQISTSTVESLVLKPP--------EPLADQLWIIDEAGMI 521 Query: 1076 GNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPE 1135 MA A G R + GD Q AI G P R A ++ + I +Q Sbjct: 522 SARQMAIILKKANAVGARLLLVGDPRQNPAIEAGSPMRSLIQHGATTFSLREIIRQQNAV 581 Query: 1136 LREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAM 1195 R AV + ALS L Sbjct: 582 QRRAVELMATGHPVHALSLLTE-------------------------------------- 603 Query: 1196 LKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELG 1255 P +AI + + R+ TLIVT N +RR ++ + LG Sbjct: 604 HGYVQEISDPQARSQAIAHQWLTLSDSERQNTLIVTGTNAERRAIHQQLRRGLRDEEGLG 663 Query: 1256 KEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVD------NVYHRIAGISKDDGLITL 1309 ++Q+ ++N + + R + + + + D + + Sbjct: 664 EDQLFRQLINR-QLTTEQKLRWENYRVGDYIRLHRNYESTLLGKGRLYQVVGIRDRQLLV 722 Query: 1310 QDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSG 1369 + G P + ++ I + G+++R+T +DR+ G + S +V ++ Sbjct: 723 ESEGGRLLWFDPARYRDK--EVFKTGEIAIAPGEQLRWTLTDRKTGQINGSQVSVREIND 780 Query: 1370 DSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGF 1429 D +T+ D Q G+ +D A+ TA+ AQG + I + Sbjct: 781 DHLTVVDDQGQEWRINGRLPL--TLDYAHVTTAYSAQGLTAERVIV----SATNNPTSAQ 834 Query: 1430 ESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTAR 1489 E YV +SR + +Q+Y ++ +G + + +V + ++ + ER F Sbjct: 835 EPFYVKISRQVRELQIYVEDLEGLREWVGRSVAQMNPLELIGG----HDVKRERQFGATG 890 Query: 1490 ELRDVAAGRAVLRQAGLAGGDSPARFIAP-GRKYPQPY-------VALPAFDRNGKSAGI 1541 + AG+ + L+GG+ + A +Y P+ V+ P +G++ Sbjct: 891 AHDEPEAGQPDRPEQNLSGGEHSLKVDAGLEPQYRPPHHATGTSDVSRPVPRGSGEAEAF 950 Query: 1542 WLNPLTTDDGNGLRGFSGEGRVKGSGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDS 1601 + G G G G R + + + + R + Sbjct: 951 GDVRCDSSTGFGSEGIEGPDRPFSIDRYPDQLVPQPDPSRNQCVNPLLIQQRFDQIAQQM 1010 Query: 1602 GVVVRIAGEGRPWNPGAITGGRVWGDIPDNSVQPGAGNGEPVTAEVLAQR-QAEEAIRRE 1660 G V G P T G+ + A E + E L Q Q E Sbjct: 1011 GAVF----PGNPETSLNATFGQ----SHYRGLAEFAQELEYLGEEDLCQTLQDITHALVE 1062 Query: 1661 TERRADEIVRKM--AENKPDLPDGKTEQAVREIAGQERDRAAITEREAALPEGVL--REP 1716 ER + ++++ L ++EQA+ E Q A + +A P+ ++ Sbjct: 1063 VERCLERSLQQVKLDTITDALQSWRSEQALSEAIAQ----IATVQAQAEEPDSLILGTVL 1118 Query: 1717 QRVREAVREIARENLLQERLQ--QMERDMVRDLQK 1749 Q VR+ + L ER++ Q E+D+ L++ Sbjct: 1119 QEVRKLPYRREEVDHLVERVEEWQAEQDLSAVLEQ 1153 >UniRef50_B5JHM8 TrwC relaxase family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JHM8_9BACT Length = 931 Score = 455 bits (1169), Expect = e-126, Method: Composition-based stats. Identities = 176/906 (19%), Positives = 323/906 (35%), Gaps = 93/906 (10%) Query: 14 GNYYTDKDNYYVLGSMGERWAGRGAEQLGLQG-SVDKDVFTRLLEGRLPDGADLSRMQDG 72 NYY + Y + + G+ A +LGL VDK F L + R P D D Sbjct: 2 VNYYIEHSYYRTSNDSKQVYKGKLAMRLGLSNKEVDKLSFEALTKNRDPLTGDRLTFHDD 61 Query: 73 SNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEALASTRVMTDGQSE 132 + H YD F +PK VS+++ L GD+R+ A AV+ A+++VE A RV G + Sbjct: 62 KSVH--AYDFNFHSPKGVSILSKLAGDERIGKAIMAAVNEAMKEVEKNAMCRVRKGGANY 119 Query: 133 TVLTGNLVMALFNHDTSRD----QEPQLHTHAVVANVTQHNGEWKTLSSDKVGKTGFIEN 188 + + L+ A SR +P H H +V NVT W + +K K Sbjct: 120 SRESRELLWAEMPDSHSRPVNGVPDPHEHCHCLVFNVT-----WDPI--EKCQKVIKATQ 172 Query: 189 VYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP---VEAFSGRSQTIREAV 245 + N +Y +L +VE LGY E GK W++ G+P E FS R++ I + V Sbjct: 173 IKNNAPLLQAIYLSRLATEVEKLGYRIEKDGKG--WDIAGIPSETKEKFSNRTKQIDDYV 230 Query: 246 GEDASLKSRD--VAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRT 303 + + + + A TRK K + + + W L ET D + Sbjct: 231 RDHGLVDACEMGAAGAKTRKGKNKLSQKEIQSNWDSRLTET-----EKNDLQKMKMRAIM 285 Query: 304 LTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDE 363 P D ++A++ ++ ER T ++LA + + P ++ Sbjct: 286 NGPIVRISDPSIAREALSHSVEKNFERNSVATQPNLLAEAL-LYKPGKVSLDELTVLTG- 343 Query: 364 AISREQLIPLDREKGLF-TSGIHVLDELSVRALSRDIMKQNRVT---VHPEKSVPRTAGY 419 S E D+ + T+ + +E S + + Sbjct: 344 --SSEFQTAKDKHGRKWVTTAAVLREEKSCIDYVYRNRGNGERLGSKQYRISDTRLSEEQ 401 Query: 420 SDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQD 479 AV + R S+ + G G +G+ + E+ E G +V+ A R+ +K+D Sbjct: 402 RSAVHQILDSRDSVTALLGPAG-SGKTTLIQEVQKGLNEAGHKVRFFAPSGRAVDVLKED 460 Query: 480 ERLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQ 539 + I + E G + VD+ LS + L A +++++ Sbjct: 461 A-FKADTIQSLLKADEISDEMRGKVIWVDEAGLLSFPQMSKLFSMAESAGCRIVMSGDQA 519 Query: 540 RTGT---GSALMAMKDAG------VNTYRWQGGEQRPATI-------------------- 570 + G AL + G ++ R Q E I Sbjct: 520 QHTAVERGDALRVLLKHGGLNGPSISQIRRQKKEPLRDAISSLSNPERDFESVVNGFKKL 579 Query: 571 ------ISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVL 624 D R A +A ++ S + E + E +T A+R++L+ +G L Sbjct: 580 EKEGCIHELQDEESRLANIADEYFESRQNEESCLVVSPTHIEGKKVTNAVRAKLQAEGKL 639 Query: 625 GLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWN---PETRSHDRYVIDRVTAQSHSL 681 P + L+ + +D+ + + + Y G+V++ R+ Y++ + T + Sbjct: 640 QGPSKSFETLTDLSMDTADKRIAENYEAGLVVKFHRHCPNNLRAGQDYLVTKTTKDE--V 697 Query: 682 TLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVS---GGDRLQVA 738 +R G V+ + L + +F E + + +++++T K VA Sbjct: 698 VIRKPNGLDAVLPL-HLAERFGVFDRETIDLRKRDKVQLTAKYKSRSGRTHSNKSIFTVA 756 Query: 739 SVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVF---ASVTQM 795 + + G + D F L + + ++ Sbjct: 757 GFTRKGEIKLNNGT-------ILDPEFKQLTHGYVTTSHSSQGETVDRVIVAQSSASHNA 809 Query: 796 AMDNATLNGLARSGRDVRLYSSLDE---TRTAEKLARHPSFTVVSEQIKTRAGETSLETA 852 A +R+ ++ +Y+ E E R + ++ ++ + A Sbjct: 810 ASSEQFYVSCSRARENISVYTDDSEALLDNVLESCHRPSATELLEGDLRDKGELWEFREA 869 Query: 853 ISHQKS 858 I + S Sbjct: 870 IQRKHS 875 Score = 297 bits (760), Expect = 3e-78, Method: Composition-based stats. Identities = 120/745 (16%), Positives = 253/745 (33%), Gaps = 73/745 (9%) Query: 792 VTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLET 851 + D+ ++ + ++ E + S +E+ + + Sbjct: 226 IDDYVRDHGLVDACEMGAAGAKTRKGKNKLSQKEIQSNWDSRLTETEKNDLQKMKMRAIM 285 Query: 852 AISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQ 911 + + + A++A+ ++ + + +LL EA + EL Sbjct: 286 NGPIVRISDPSIAREALSHSVEKNFERNSVATQPNLLAEALLYKPGKVSLDEL------T 339 Query: 912 IKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTS 971 + G + +G + + A EKS + ++ + L + +L+ Sbjct: 340 VLTGSSEFQTAKDKHGRKWVTTAAVLREEKSCIDYVYRNRGNGERLGSKQYRISDTRLSE 399 Query: 972 GQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVG 1031 QR+A IL++ D T + G AG GKTT + V +N +V P+ RAV Sbjct: 400 EQRSAVHQILDSRDSVTALLGPAGSGKTTLIQEVQKGLNEA----GHKVRFFAPSGRAVD 455 Query: 1032 EMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGG 1091 ++ A T+ S L ++ + +DE+ ++ M++ +++ + G Sbjct: 456 VLKEDAFKADTIQSLLKADEISDE------MRGKVIWVDEAGLLSFPQMSKLFSMAESAG 509 Query: 1092 GRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERA 1151 R V SGD Q A+ G R+ + + +I RQ E S ++ Sbjct: 510 CRIVMSGDQAQHTAVERGDALRVLLKHGGLNGPSISQIRRQKKEPLRDAISSLSN----- 564 Query: 1152 LSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEA 1211 V E + E + Sbjct: 565 ----PERDFESVVNGFKKLEKEGCIHELQDE-----------------------ESRLAN 597 Query: 1212 IVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRD 1271 I +Y + + E L+V+ + + + + + + + G+L L ++ Sbjct: 598 IADEYFE-SRQNEESCLVVSPTHIEGKKVTNAVRAKLQAEGKLQGPSKSFETLTDLSMDT 656 Query: 1272 GELRRLSTWETH-------RDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREA 1324 + R +E L + + +KD+ +I + Sbjct: 657 ADKRIAENYEAGLVVKFHRHCPNNLRAGQDYLVTKTTKDEVVIRKPNG----LDAVLPLH 712 Query: 1325 VAEGVTLYTPDTIRVGTGDRMRFT---KSDRERGYVANSVWTVTAV-SGDSVTLSDGQQT 1380 +AE ++ +TI + D+++ T KS R + S++TV + L++G Sbjct: 713 LAERFGVFDRETIDLRKRDKVQLTAKYKSRSGRTHSNKSIFTVAGFTRKGEIKLNNGT-- 770 Query: 1381 REIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMK 1440 + + + Y T+H +QG + I A E YV+ SR + Sbjct: 771 -----ILDPEFKQLTHGYVTTSHSSQGETVDRVIV--AQSSASHNAASSEQFYVSCSRAR 823 Query: 1441 QHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAV 1500 +++ VYTD+ + D + + + +A ++ E + E + R+ + ++V Sbjct: 824 ENISVYTDDSEALLDNVLESCHRPSATELLEGDLRDKGELWEFREAIQRKHSYESLQQSV 883 Query: 1501 LRQAGLAGGDSPARFIAPGRKYPQP 1525 + + P PQP Sbjct: 884 TSERDTKEPEQPREEPEIDHYGPQP 908 >UniRef50_Q3SHW0 TrwC protein n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SHW0_THIDA Length = 929 Score = 442 bits (1135), Expect = e-122, Method: Composition-based stats. Identities = 204/949 (21%), Positives = 366/949 (38%), Gaps = 106/949 (11%) Query: 3 SIAQVRSAGSAGNYYTDKDNYY-VLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRLP 61 +++ +++AG A YY D+YY G W G+GAE LGL+G V +L G LP Sbjct: 4 TVSAIKTAGVAAEYYAQTDDYYRDRGHAPTAWQGKGAEALGLRGEVTPAQAEAILNGILP 63 Query: 62 DGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEAL- 120 +G + G HRPG+D TFSAPKSVS+ A + GD RLI AH++AV+ A++ +E Sbjct: 64 NGERV-----GGGDHRPGWDATFSAPKSVSVAAYVRGDDRLIAAHDRAVNAAIQYLEREV 118 Query: 121 ASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ-HNGEWKTLSSDK 179 A+TR+ +G+ T TGNLV A + HD SR+ EP LHTH+V+AN+TQ +G+W++L S Sbjct: 119 AATRIREEGEVRTEATGNLVAATYRHDVSREGEPDLHTHSVIANITQSADGQWRSLESRP 178 Query: 180 VGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVV--GKHGMWEMPGVPV---EAF 234 +Y Q G +YR L + E LGY TE G+H +E+ V + + Sbjct: 179 ---------LYRLQTDAGAVYRAALARECERLGYATERTRAGEHPSFELRQVSQAERDMW 229 Query: 235 SGRSQTIREAVG------EDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDI 288 S RS+ + + E A+ + + AAL TR++K ++ + ++ W + ++ G ++ Sbjct: 230 STRSRQVEAELAKMGLSRETATAEQKQAAALATRQAKGNIGRDNLLSNWREQSRQAGHEM 289 Query: 289 RAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILP 348 A A + A + + AV QA+ LSER+ ++T ++ L Sbjct: 290 PALPQAQEIDAG----------EYRRRAEAAVRQAVEHLSERESRYTERQIVTEARK-LG 338 Query: 349 PENGVIERARAGIDEAISREQLIPLDR-----------EKGLFTSGIHVLDELSVRALSR 397 + RA + + R +L+ E+ +T+ E + + Sbjct: 339 MGGIDDQDIRAAVADLHRRGELVETQTRQHDAITGQRLEQAGYTTREAQRIERHMLDTAS 398 Query: 398 DIMKQNRVTVHPEKSV------------PRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQ 445 + + E + +A L + +V G G A Sbjct: 399 RAAGAIKPAMSIEAADAAISAQVAKTGHAFNTAQVEATKALLTGTDRITLVQGYAGTAKT 458 Query: 446 RERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGSTV 505 +A ++QG V +A S + + + ++ P Sbjct: 459 TSVLAVSSAALQQQGYGVIALAPTHSSAKTLGDAIGAESQTVAKFLNSRPEVSSQPR-IY 517 Query: 506 IVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTG---TGSALMAMKDAG------VN 556 +VD+ LS ++ LL +V++ ++ G G+A ++ G ++ Sbjct: 518 MVDEASMLSARDMDKLLSRTQ--GGRVVMVGDVKQLGSVEAGAAFRQLQTDGDLKTQVLD 575 Query: 557 TYRWQGGEQRPATII-----------------SEPDRNVRYARLAGDFAASVKAGEESVA 599 Q ++ A + R R +A D+A + + Sbjct: 576 YIVRQRSDELRAAVYDAIRGDVQSALSKIDVRELDTRESRVGAIAADYAGMSRDDRDRTI 635 Query: 600 QVSGVR-EQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQ 658 ++ R ++ + A+R +L +G LG VT+ AL + + Y G ++ Sbjct: 636 IIAPGRDDRRQINDAVREQLAARGELGG-SVTIQALDSRDMTAVESRRAGSYAVGHQVQA 694 Query: 659 WNP----ETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVAD 714 + D + V + +TL G + + S + + + F M VA Sbjct: 695 GRDYASLGLKRGDFARVVAVDVDCNRITLETVTGHQKEIDPSRV-TKLAAFEQRDMAVAV 753 Query: 715 GERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGW 774 G++L + G L V ++E + V + L Sbjct: 754 GDKLVNRVN--TQTLKNGTPLTVEKIAEGQIHVRDAAGK---LHRLDAGAMHRLDHGYAQ 808 Query: 775 VETPGHSVSDSATVFASVTQMAM---DNATLNGLARSGRDVRLYSSLDETRTAEKLARHP 831 + + + + + L+R+ D R+Y+ A+ Sbjct: 809 TGHESQGRTCTRVLIHAESARTNLQTQQNMYVALSRATDDARVYTDNRGALAAQIERESG 868 Query: 832 SFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKL 880 + + L + A ++ AI + P + + Sbjct: 869 QKETALAEPEPPPPALELPMPGPAIEPAPWETSEPAIDVRTPDILEIET 917 Score = 261 bits (665), Expect = 3e-67, Method: Composition-based stats. Identities = 151/708 (21%), Positives = 259/708 (36%), Gaps = 94/708 (13%) Query: 783 SDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKT 842 + S V A + +M + T A + L + + + Sbjct: 231 TRSRQVEAELAKMGLSRET--ATAEQKQAAALATRQAKGNIGRDNLLSNWREQSRQAGHE 288 Query: 843 RAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFT 902 + + + A + A+ + ++ ++ ++TEA+ G Sbjct: 289 MPALPQAQEIDAGEYRRRAEAA---VRQAVEHLSERESRYTERQIVTEARKLGMGGIDDQ 345 Query: 903 ELGGEINAQIKRGDLLYVDVAKGY-------GTGLLVSRASYEAEKSILRHILEGKEAVM 955 ++ + +RG+L+ + +R + E+ +L A+ Sbjct: 346 DIRAAVADLHRRGELVETQTRQHDAITGQRLEQAGYTTREAQRIERHMLDTASRAAGAIK 405 Query: 956 PLMERVPGELMEK---------LTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVM 1006 P M + + Q AT+ +L +DR T+VQGYAG KTT AV Sbjct: 406 PAMSIEAADAAISAQVAKTGHAFNTAQVEATKALLTGTDRITLVQGYAGTAKTTSVLAVS 465 Query: 1007 SAVNMLPESERPRVVGLGPTHRAVGEMRSA-GVDAQTLASFLHDTQLQQRSGETPDFSNT 1065 SA + + V+ L PTH + + A G ++QT+A FL+ Sbjct: 466 SA---ALQQQGYGVIALAPTHSSAKTLGDAIGAESQTVAKFLNSRPEVSSQPR------- 515 Query: 1066 LFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAI 1125 ++++DE+SM+ DM + + GGR V GD QL ++ G FR QT + Sbjct: 516 IYMVDEASMLSARDMDKLLSRTQ--GGRVVMVGDVKQLGSVEAGAAFRQLQTDGDLKTQV 573 Query: 1126 MKEIVRQT-PELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQE 1184 + IVRQ ELR AVY I DV+ ALS ++ Sbjct: 574 LDYIVRQRSDELRAAVYDAIRGDVQSALSKID---------------------------- 605 Query: 1185 AKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMI 1244 D + AI DY G + + R++T+I+ +DRR +N + Sbjct: 606 --------------VRELDTRESRVGAIAADYAGMSRDDRDRTIIIAPGRDDRRQINDAV 651 Query: 1245 HDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDAL--------VLVDNVYHR 1296 + GELG V + L++ ++ E RR ++ L + R Sbjct: 652 REQLAARGELGG-SVTIQALDSRDMTAVESRRAGSYAVGHQVQAGRDYASLGLKRGDFAR 710 Query: 1297 IAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGY 1356 + + D ITL+ G+ + I P + + + V GD++ + + Sbjct: 711 VVAVDVDCNRITLETVTGHQKEIDPSR--VTKLAAFEQRDMAVAVGDKLVNRVN--TQTL 766 Query: 1357 VANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIAL 1416 + TV ++ + + D + A +D YA T H +QG + T L Sbjct: 767 KNGTPLTVEKIAEGQIHVRDAAGK--LHRLDAGAMHRLDHGYAQTGHESQGRTCTRV--L 822 Query: 1417 EGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKG 1464 E R + ++ YVALSR +VYTDNR I + Sbjct: 823 IHAESARTNLQTQQNMYVALSRATDDARVYTDNRGALAAQIERESGQK 870 >UniRef50_A6Q5N5 Putative uncharacterized protein n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q5N5_NITSB Length = 961 Score = 441 bits (1134), Expect = e-122, Method: Composition-based stats. Identities = 175/1000 (17%), Positives = 361/1000 (36%), Gaps = 109/1000 (10%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQG--SVDKDVFTRLLEG 58 M+SI++ ++ A +YY ++NYY S + G A +G++ V KD F LL Sbjct: 1 MISISKFQNKDQASSYY-QEENYYQKNSENGFFHGAAAPAVGVKNGQEVTKDTFQSLLNN 59 Query: 59 RLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMA----MLGGDKR---LIDAHNQAVD 111 + ++ + R G+D+TFSAPKSVS+M G + L +AH +A Sbjct: 60 THAITGEALT-KNTTANKRAGFDVTFSAPKSVSVMMEALQANGLTEEALKLREAHERATQ 118 Query: 112 FAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSR-----DQEPQLHTHAVVANVT 166 A+ ++ A TR+ + + +V A F HDT+R + +PQLHTH + NV Sbjct: 119 KAMEEIGKYALTRIRNEAGEIERIKAGIVYASFQHDTTRITPSGNIDPQLHTHNFIFNVV 178 Query: 167 QHNGEWKTLSSDKVGKTGFIE--NVYANQIAFGRLYREKLKEQVEALGYETEVVG-KHGM 223 + + + KTG IE +Y N++ FG+LYR +L ++ LGY+ E K+G Sbjct: 179 SY------VDKNGEFKTGAIENFGIYKNKMYFGQLYRNELANNLKELGYKIEFTDAKNGF 232 Query: 224 WEMPGVPVE---AFSGRSQTIREAVGED-------ASLKSRDVAALDTRKSKQHVDPEIK 273 +E+ E FSGRS+++R + E K ++ D + KQ V+ E Sbjct: 233 FELQDFKKEELKEFSGRSKSMRALIEEYREKYPNTNESKLLEIINQDIKPPKQEVEREEI 292 Query: 274 MAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQ 333 + + L+ G + R + + ++E Sbjct: 293 LNKNKNRLENIGITKERIEELLHNR------EKESEGLKQAKADEFIELTARAITETNST 346 Query: 334 FTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVR 393 F+ ++ + + E I +++I LD ++T+ + E + Sbjct: 347 FSKEEIHKDAMKLGLKHGITKEELEEAIK---FNDKIIQLD--NDIYTTIDVLAAEKYII 401 Query: 394 ALSRDIMKQNRVTVHPEKSV------PRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRE 447 + D Q ++ T G + S + ++ G G G+ Sbjct: 402 SKVMDKTGQLYKDRGKIENFIKNNYDNMTVGQKEMFSKILISDSQFMVIQGDAG-TGKTY 460 Query: 448 RVAELVMMAREQ--GREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFT--PGS 503 + L + RE+ ++ ++ +++D + I F Sbjct: 461 SMKALKEFLEAEQPNREIIGLSFTGKAAAGLEEDSGIKSSTIHSFLYSEAKDEFKESKER 520 Query: 504 TVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR---TGTGSALMAMKDAGVNTYR- 559 +IVD+ + ++ ++ A ++N +V+ ++ G M+ G T Sbjct: 521 LIIVDEAGLVGSRQIAKIIKIAKKNNDKVVFVGDVKQFKAIAAGDIFAEMQRRGAETITL 580 Query: 560 ----WQGGEQRPATIISEPDRN--------------------VRYARLAGDFAASVKAGE 595 Q E + D+ Y ++ D+ + Sbjct: 581 GETLRQKTEFTKEVVRLTKDQEFDQLFSLLLNSNKLLEEDKGELYQQIVNDY---FEKKG 637 Query: 596 ESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMV 655 + + S ++ I+ Q +K + + +T +++ Y + Sbjct: 638 DLLIIASKNEDRKIINQ----IIKKKNNNSNKSIKITINEMQSFSGINKFFAYSYLNTTI 693 Query: 656 MEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADG 715 P ++ + + T H+L +R + E + + + +F+ + G Sbjct: 694 NIGKIPNFKNGEIVEVVD-TKDEHTLIVRTERREEKELDLKKYADDIVVFKKVEKEFVVG 752 Query: 716 ERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWV 775 E++ T + G+ + + ED + ++ G+ S ++G+ Sbjct: 753 EKIVFTKNSKE--IKNGEIDYIKEIKEDGIILLKSGK--------SFYCHHYNYFDHGYA 802 Query: 776 ET--PGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSF 833 T V+ + +Q+A N+ + R+ D+++Y+ E A +++ Sbjct: 803 ITDYKAQGVTARNVAILADSQIASFNSFYTQVTRAKEDLKIYTQNKEELRA-NVSKKAHK 861 Query: 834 TVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLT--EA 891 + + +K E A +KS + + + + ++L F + + E Sbjct: 862 SSTLQYLKGEKNEHKRNAAGDFEKSGSYKKSISEHKREIGNIRKERLRFKEL-IYRSIEG 920 Query: 892 KSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLL 931 + + + LL ++ + LL Sbjct: 921 LKSIIQFFSQRPQQQQPKIETTTKQLLKENIRQQRFQELL 960 Score = 278 bits (709), Expect = 2e-72, Method: Composition-based stats. Identities = 115/630 (18%), Positives = 225/630 (35%), Gaps = 77/630 (12%) Query: 863 PAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAE-GTGFTELGGEINAQIKRGDLLYVD 921 A + I L + FS ++ +A + G EL I + D Sbjct: 328 KADEFIELTARAITETNSTFSKEEIHKDAMKLGLKHGITKEELEEAIK---------FND 378 Query: 922 VAKGYGTGLLVSRASYEAEKSILRHILEGKEAV---MPLMERVPGELMEKLTSGQRAATR 978 + + AEK I+ +++ + +E + +T GQ+ Sbjct: 379 KIIQLDNDIYTTIDVLAAEKYIISKVMDKTGQLYKDRGKIENFIKNNYDNMTVGQKEMFS 438 Query: 979 MILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRS-AG 1037 IL + +F V+QG AG GKT +A+ + E ++GL T +A + +G Sbjct: 439 KILISDSQFMVIQGDAGTGKTYSMKALKEFLE--AEQPNREIIGLSFTGKAAAGLEEDSG 496 Query: 1038 VDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVAS 1097 + + T+ SFL+ + L ++DE+ +VG+ +A+ + + V Sbjct: 497 IKSSTIHSFLYSEAKDEFKESKER----LIIVDEAGLVGSRQIAKIIKIAKKNNDKVVFV 552 Query: 1098 GDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLES 1157 GD Q +AIA G F Q R A + + E +RQ E + V L Sbjct: 553 GDVKQFKAIAAGDIFAEMQRRGA-ETITLGETLRQKTEFTKEVVRL-------------- 597 Query: 1158 VKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYT 1217 +++ + + + + + LY+ IV DY Sbjct: 598 ------------------------TKDQEFDQLFSLLLNSNKLLEEDKGELYQQIVNDYF 633 Query: 1218 GRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRL 1277 + + LI+ NEDR+++N +I + + K + + + L Sbjct: 634 EK----KGDLLIIASKNEDRKIINQIIKKKNNNSNKSIKITINEMQSFSGINKFFAYSYL 689 Query: 1278 STWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTI 1337 +T + + + LI + L + A+ + ++ Sbjct: 690 NTTINIGKIPNFKNGEIVEVVDTKDEHTLIVRTERREEKELDL--KKYADDIVVFKKVEK 747 Query: 1338 RVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLA 1397 G+++ FTK+ +E + + + D + L ++ + D Sbjct: 748 EFVVGEKIVFTKNSKE--IKNGEIDYIKEIKEDGIILLKSGKSFYCHH-----YNYFDHG 800 Query: 1398 YAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAI 1457 YAIT + AQG + L ++ +A F S Y ++R K+ +++YT N++ + Sbjct: 801 YAITDYKAQGVTARNVAILADSQ-----IASFNSFYTQVTRAKEDLKIYTQNKEELRANV 855 Query: 1458 NNAVQKGTAHDVFEPKPDREVMNAERLFST 1487 + K + + + + NA F Sbjct: 856 SKKAHKSSTLQYLKGEKNEHKRNAAGDFEK 885 >UniRef50_B1X2J5 Putative TrwC/TraI protein n=1 Tax=Cyanothece sp. ATCC 51142 RepID=B1X2J5_CYAA5 Length = 1053 Score = 440 bits (1132), Expect = e-121, Method: Composition-based stats. Identities = 183/881 (20%), Positives = 339/881 (38%), Gaps = 124/881 (14%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGS--------------------MGERWAGRGAEQ 40 M++I ++S +K+ YY W G+GA + Sbjct: 1 MLTITTIKSGIR------EKEEYYTQDESLEQQPLQQQNQPLNRNNKLTQAVWYGQGASE 54 Query: 41 LGLQGSVDKDVFTRLLEGRLPDGADLSRMQDGS-NRHRPGYDLTFSAPKSVSMMAMLGGD 99 LGL G + ++ F + G P+ + R ++ R G DLTFSAPKSVS+ +G D Sbjct: 55 LGLSGPIQQEDFKSVFYGFQPNADETIRRKNNRFGTERLGDDLTFSAPKSVSIALHVGND 114 Query: 100 KRLIDAHNQAVDFAVRQVE-ALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHT 158 R+ DAH AV + +VE A TR+ G E V T NL +A+ H TSRD +PQLHT Sbjct: 115 LRIFDAHTDAVKEVLDEVEKRYAQTRISKKGNREIVNTNNLTVAMIPHHTSRDGDPQLHT 174 Query: 159 HAVVANVTQ-HNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEV 217 HA V N T+ +G+W++L + ++ G LYR+KL +++ +GYE Sbjct: 175 HAFVMNGTKGPDGKWRSLYHEG----------MSHSQWLGSLYRQKLATKLQDIGYELRE 224 Query: 218 VGKHGMWEMPGVP---VEAFSGRSQTIREAVGEDA---SLKSRDVAALDTRKSKQ-HVDP 270 +E+ G+ ++ FS RSQ I +++ + + +RDVA L TRKSKQ Sbjct: 225 T--KDSFELAGINKQQIQGFSKRSQQIIKSIQKRGLEVTPSNRDVATLTTRKSKQRTATL 282 Query: 271 EIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSER 330 + +W + G + +TL P G Q+A+ AIA L ++ Sbjct: 283 QAFQTQWKAESIKMGIKVPQ----------AKTLNPSSYLGYGSS-QEALDSAIANLEQK 331 Query: 331 KVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDEL 390 +V F+ D+ + + + I + I+ ++L+ ++ FT+ + +E Sbjct: 332 QVSFSREDIYRDSFSRI--QRFDIAQLDQSIN---GHDKLLGIEDN---FTTLTAIKNES 383 Query: 391 SVRALSRDIMKQNRVTVHPE--KSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRER 448 ++R + + H E + G ++A+ + IV G + Sbjct: 384 NLRQQWDEGQHSVQPLSHNEMKEIENLNPGQTEALRQTLASEDAYQIVQGIR----FKPF 439 Query: 449 VAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGSTVIVD 508 + ELV ++ +V++ + + +++ + + + + F ++D Sbjct: 440 IGELVNQLKDSQIKVEVYSPTETGAVTLQKGYSIDADTVD---NAGDSDNFGNHQLWVID 496 Query: 509 QGEKLSLKETLTLLDGAARHNVQVLITDSGQR-TGTGSALMAMKDAGVNTYRWQGG---- 563 + E L L + LL A ++++ GS L ++ D G T+ + Sbjct: 497 EAESLDLSQMRDLLKRANSEQARLVLVGGNNSDIKRGSPLRSLMDHGAKTHSLKEIIKES 556 Query: 564 -----------------------------EQRPATIISEPDRNVRYARLAGDFAASVKAG 594 + T + E R + +A ++ A Sbjct: 557 KTDIEQAACLINDGHRSDAVELLNNNGYVHEVEETALHEAHRFADLSEIASEYLALSPTE 616 Query: 595 EESVAQVSGV-REQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPG 653 + ++ ++ + Q IRS++K G LG VT+ L P L R Y+ G Sbjct: 617 QAQTLIITDSDEDKDAIIQEIRSQMKASGQLG-ESVTVAQLIPKNLSKEQRQDISNYQEG 675 Query: 654 MVMEQWNPETRSH--DRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMP 711 ++ + + + + L + G S +F + Sbjct: 676 DYFRLKRDYKKTPLIKDKLYQVLEVRENDLQVSSLGGRLYNFDPSEYK-DIEVFGSSSVE 734 Query: 712 VADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLE 771 +A G+R++ T +S + V ++ + M + E + P + Sbjct: 735 IAIGDRIQATANDKTSGLS-KKQFTVKAIDDGNMVLRDYKDNEQSISLSHPLPIERIDAG 793 Query: 772 NG--------WVETPGHSVSDSATVFASVTQMAMDNATLNG 804 + + + S S+ ++ V+Q D + Sbjct: 794 SETPKKATKVILASTRQSNSNPDSLLGKVSQFVKDVSLYVP 834 Score = 179 bits (453), Expect = 1e-42, Method: Composition-based stats. Identities = 108/612 (17%), Positives = 218/612 (35%), Gaps = 81/612 (13%) Query: 864 AQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVA 923 +Q+A+ A+ +E K+++FS D+ ++ S + +L IN D Sbjct: 317 SQEALDSAIANLEQKQVSFSREDIYRDSFSRI-QRFDIAQLDQSINGH---------DKL 366 Query: 924 KGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILET 983 G + + + E ++ + EG+ +V PL E+ E L GQ A R L + Sbjct: 367 LGIEDN-FTTLTAIKNESNLRQQWDEGQHSVQPLSHNEMKEI-ENLNPGQTEALRQTLAS 424 Query: 984 SDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRS-AGVDAQT 1042 D + +VQG +F+ + + + + +V PT ++ +DA T Sbjct: 425 EDAYQIVQGI-------RFKPFIGELVNQLKDSQIKVEVYSPTETGAVTLQKGYSIDADT 477 Query: 1043 LASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQ 1102 + ++ L+++DE+ + + M + R V G + Sbjct: 478 V---------DNAGDSDNFGNHQLWVIDEAESLDLSQMRDLLKRANSEQARLVLVGGNN- 527 Query: 1103 LQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQ 1162 I G P R A +KEI++++ E LIN L + Sbjct: 528 -SDIKRGSPLRSLMDHGA-KTHSLKEIIKESKTDIEQAACLINDGHRSDAVELLNNNGYV 585 Query: 1163 VPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPE 1222 +E A H + S I +Y +P Sbjct: 586 HEVEETALHEAHRFADLS------------------------------EIASEYLALSPT 615 Query: 1223 AREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWET 1282 + QTLI+T +ED+ + I + +G+LG E V V L N+ + + +S ++ Sbjct: 616 EQAQTLIITDSDEDKDAIIQEIRSQMKASGQLG-ESVTVAQLIPKNLSKEQRQDISNYQE 674 Query: 1283 HRDALVLVDNVYHRIAGISKDDGLITLQDAEGNT-----RLISPREAVAEGVTLYTPDTI 1337 D L + K ++ +++ + RL + + + + ++ ++ Sbjct: 675 G-DYFRLKRDYKKTPLIKDKLYQVLEVRENDLQVSSLGGRLYNFDPSEYKDIEVFGSSSV 733 Query: 1338 RVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAE-QHIDL 1396 + GDR++ T +D+ G +TV A+ ++ L D + + + ID Sbjct: 734 EIAIGDRIQATANDKTSGLSKKQ-FTVKAIDDGNMVLRDYKDNEQSISLSHPLPIERIDA 792 Query: 1397 AYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDA 1456 G+ R+ + +S +S+ + V +Y + + Sbjct: 793 ----------GSETPKKATKVILASTRQSNSNPDSLLGKVSQFVKDVSLYVPDFSEFKSW 842 Query: 1457 INNAVQKGTAHD 1468 + + Q + Sbjct: 843 LKSFEQSSQTTE 854 >UniRef50_Q2NBK6 TrwC protein n=7 Tax=Sphingomonadales RepID=Q2NBK6_ERYLH Length = 970 Score = 436 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 204/979 (20%), Positives = 355/979 (36%), Gaps = 126/979 (12%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSM--GERWAGRGAEQLGLQGSVDKDVFTRLLEG 58 M+S+A VRS +A +Y+ DNYY +W G GA +LGL G V+ VF LL+G Sbjct: 1 MLSVANVRSPSAAASYFAS-DNYYASADADRSGQWVGEGARRLGLDGKVEAAVFDALLQG 59 Query: 59 RLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVE 118 LPDG+ + + HRPG DLTFS PKS S++A++G D+R+I A+ +AV A+ E Sbjct: 60 ELPDGSSVG---NPGQTHRPGTDLTFSVPKSWSLLALVGKDERIIAAYREAVLEALHWAE 116 Query: 119 ALAS-TRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ-HNGEWKTLS 176 A+ TR++ G+ T TG+L + LF HDT+R+QEP LH HAV+ANVTQ +G+W+TL Sbjct: 117 KNAAETRMVEKGKIVTQATGSLAIGLFQHDTNRNQEPNLHFHAVIANVTQGKDGKWRTLK 176 Query: 177 SDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVE---A 233 +D++ + + + + VE LGYE KHG +E G+ E A Sbjct: 177 NDRLWQLNT---------TLNSIAMARFRVAVEKLGYEPGPTLKHGNFEARGITREQVMA 227 Query: 234 FSGRSQTIREAVGEDASLKSRDVAALDTRKSKQH-VDPEIKMAEWMQTLKETGFDIRAYR 292 FS R Q + +A L++ +AALDTR SK D E W +T K G D+ Sbjct: 228 FSSRRQEVLDAR-RGPGLEAGRIAALDTRASKDTIEDRETLGKLWSETAKSIGLDLAPLV 286 Query: 293 DAADQRADLRTLTPG----------------------------------PASQDGPDVQQ 318 + A R +++ G ++ Q Sbjct: 287 ERARIRTLKQSIETGRFGSLVERGRAWLGRFAAHVRGDPADPLVPKSVLRQDRETIAAAQ 346 Query: 319 AVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQL-IPLDREK 377 AV A+ LS+R+ F T + + P I + L + K Sbjct: 347 AVASAVRHLSQREAAFERTALYKAALDFGLP--ATIADIEKRTRALVRSGDLIVGKGDHK 404 Query: 378 GLFTSGIHVLDELSVRALSRDIMK-------------QNRVTVHPEKSVPRTAGYSDAVS 424 G S V+ E + + + + + G A Sbjct: 405 GWLASRDAVIAEQRILSEVAAGKGASSSAVETGSATARVQAAAMAGQGFRLNEGQLGAAK 464 Query: 425 VLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSG 484 ++ V G G AG+ + + + R +GR V +A +++D ++ Sbjct: 465 LILTSEDRTIAVQGIAG-AGKSSVLKPVAEVLRAEGRPVIGLAIQNTLVQMLERDTGIAS 523 Query: 485 ELITGRR--------------QLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHN- 529 + + LE A +++D+ +S ++ L+ A Sbjct: 524 QTLARFLGGWNKLLDDPGNAVLRLEAKAALKDHVLVLDEASMISNEDKEKLVRLANLAGV 583 Query: 530 VQVLITDSGQRTG---TGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAG- 585 ++++ ++ G G ++ G+ + +I E + + Sbjct: 584 HRLVLMGDRKQLGAVDAGKPFALLQRTGMARAEMATNLRARDPVIREAQAAAQAGDVRTA 643 Query: 586 ----------------------DFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGV 623 A + SG ++ + AI+ L G Sbjct: 644 LRHLQPHTVEAKGDGALVAADIWLALDKDDRARTSIYASGRAIRSAVNAAIQQGLLANGE 703 Query: 624 LGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSH---DRYVIDRVTAQSHS 680 +G + + L V Y+PG V+E + Y + + Sbjct: 704 IGPGKAELGVLDRVNTTREELRHLSAYQPGRVLEVSRKQQALGLSAGEYRVLGQDRKGRQ 763 Query: 681 LTLRDAQGETQVVRI-----SSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRL 735 + + D +G+ D + +L P K+ + +G+R+R T + D+ Sbjct: 764 VEVADKRGKRFRFDPARIRAGKGDQNLTLHEPRKLEIHEGDRIRWTRNDHRRGLFNADQA 823 Query: 736 QVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQ- 794 +V +V +T + + L D + L ++ + ++ Sbjct: 824 RVVAVVGGKVTFETS-KGDQVELKKDDPMLKRIDLAYALNAHMAQGLTSDRGIAVMDSRE 882 Query: 795 --MAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETA 852 ++ L + R + L + A E Sbjct: 883 RNLSNQKTFLVTITRLRDHLTLVVDSSDRLGAVVARNKGEKASALEVTAQLTPTEKKNGE 942 Query: 853 ISHQKSALHTPAQQAIHLA 871 + K A++ + + Sbjct: 943 LDQLKPEEANKAEKELARS 961 Score = 283 bits (722), Expect = 5e-74, Method: Composition-based stats. Identities = 156/686 (22%), Positives = 250/686 (36%), Gaps = 84/686 (12%) Query: 856 QKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRG 915 ++ A QA+ A+ + ++ AF L A F ++ A ++ G Sbjct: 336 RQDRETIAAAQAVASAVRHLSQREAAFERTALYKAALDFGL-PATIADIEKRTRALVRSG 394 Query: 916 DLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLME----------RVPGEL 965 DL+ V KG G L SR + AE+ IL + GK A +E Sbjct: 395 DLI---VGKGDHKGWLASRDAVIAEQRILSEVAAGKGASSSAVETGSATARVQAAAMAGQ 451 Query: 966 MEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGP 1025 +L GQ A ++IL + DR VQG AG GK++ + V + +E V+GL Sbjct: 452 GFRLNEGQLGAAKLILTSEDRTIAVQGIAGAGKSSVLKPVAEVLR----AEGRPVIGLAI 507 Query: 1026 THRAVGEM-RSAGVDAQTLASFLHDTQLQQRSGETPDFS--------NTLFLLDESSMVG 1076 + V + R G+ +QTLA FL + + +LDE+SM+ Sbjct: 508 QNTLVQMLERDTGIASQTLARFLGGWNKLLDDPGNAVLRLEAKAALKDHVLVLDEASMIS 567 Query: 1077 NTDMARAYALIAAGGG-RAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPE 1135 N D + L G R V GD QL A+ G+PF L Q A + + + P Sbjct: 568 NEDKEKLVRLANLAGVHRLVLMGDRKQLGAVDAGKPFALLQRTGMARAEMATNLRARDPV 627 Query: 1136 LREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAM 1195 +REA + DV AL L+ Sbjct: 628 IREAQAAAQAGDVRTALRHLQP-------------------------------------- 649 Query: 1196 LKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELG 1255 + + + R +T I R +N+ I GE+G Sbjct: 650 ----HTVEAKGDGALVAADIWLALDKDDRARTSIYASGRAIRSAVNAAIQQGLLANGEIG 705 Query: 1256 KEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNV-------YHRIAGISKDDGLIT 1308 + + VL+ N ELR LS ++ R V +R+ G + + Sbjct: 706 PGKAELGVLDRVNTTREELRHLSAYQPGRVLEVSRKQQALGLSAGEYRVLGQDRKGRQVE 765 Query: 1309 LQDAEGNTRLISPRE----AVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTV 1364 + D G P + +TL+ P + + GDR+R+T++D RG V Sbjct: 766 VADKRGKRFRFDPARIRAGKGDQNLTLHEPRKLEIHEGDRIRWTRNDHRRGLFNADQARV 825 Query: 1365 TAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRK 1424 AV G VT + + + + IDLAYA+ AH AQG + IA+ + Sbjct: 826 VAVVGGKVTFETSKGDQVELKKDDPMLKRIDLAYALNAHMAQGLTSDRGIAVMD--SRER 883 Query: 1425 LMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNA-VQKGTAHDVFEPKPDREVMNAER 1483 ++ ++ V ++R++ H+ + D+ + +K +A +V E N E Sbjct: 884 NLSNQKTFLVTITRLRDHLTLVVDSSDRLGAVVARNKGEKASALEVTAQLTPTEKKNGEL 943 Query: 1484 LFSTARELRDVAAGRAVLRQAGLAGG 1509 E A + L G Sbjct: 944 DQLKPEEANKAEKELARSKSKTLDFG 969 >UniRef50_UPI00016C3594 TrwC protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3594 Length = 896 Score = 435 bits (1118), Expect = e-120, Method: Composition-based stats. Identities = 191/912 (20%), Positives = 334/912 (36%), Gaps = 92/912 (10%) Query: 2 MSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRLP 61 + + VRS+ A YY+ D Y + W G GA LGL G+V++ F R+ + P Sbjct: 9 LRVMVVRSSKGAKQYYSAGDYYSAGQELPGEWGGIGAAHLGLTGTVERGEFARMCDNFHP 68 Query: 62 DGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEALA 121 ++ +R +DL + PKS+S++ L L+ A QAV+ +R++E A Sbjct: 69 RTGQRFTLRTNVSRRVA-FDLNWHVPKSLSVLFGLTQSAELLAAFRQAVEETMRELELRA 127 Query: 122 STRVMTDGQSETVLTGNLVMALFNHDTSRD----QEPQLHTHAVVANVTQH--NGEWKTL 175 TRV G ++ TGNL A + H T+R +P LH HAVV N T G WK L Sbjct: 128 QTRVRIKGANQVRTTGNLTWASYVHTTARPVGGVPDPHLHCHAVVFNATFDPIEGRWKAL 187 Query: 176 SSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPV---E 232 +V + F + +L ++ LGY+T K WE+ GVP E Sbjct: 188 DLCQVKRA---------APYFEATFHARLAAKLRHLGYDTVRTSKG--WELAGVPRRVLE 236 Query: 233 AFSGRSQTIREAVGED--ASLKSRDVAALDTRKSKQHV-DPEIKMAEWMQTLKETGFDIR 289 FS R++ I E + ++D TR+ K A W + TG ++R Sbjct: 237 EFSRRTKLIERVAEEQEITNAHAKDAIGALTRERKSTALSLSKLRARWRA--RITGDELR 294 Query: 290 AYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPP 349 A A + D V+ A+ A+ ER+ + +LA + Sbjct: 295 ALELVAAKALDRPPRNLNA-------VRDALHYAVEHCFERESAVSVDRLLAVALRRGVG 347 Query: 350 ENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHP 409 E + RA L+ T+ + +E+ + A +RD V Sbjct: 348 E-VAVNEIRAAFKGL---GLLVQERDGVEYATAREVLAEEIRMLAFARDGRGICARLVPN 403 Query: 410 EKSVP---RTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQII 466 + + AV+ + + ++ G G G+ + E V + G V + Sbjct: 404 HSPIAREWLSNEQKAAVAHVLGSHDRVTLLRGAAGV-GKTALMIEAVEAIEKSGTRVIPL 462 Query: 467 AADRRSQMNMKQDERLS-GELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGA 525 A + + + E S + + E G + VD+ L L D A Sbjct: 463 APSAAASRGVLRAEGFSSADTVARFLVDAEFQERARGHVIWVDEAGLLGTVALAALFDTA 522 Query: 526 ARHNVQVLITDSGQR---TGTGSALMAMK-DAGVNT-----YRWQGGEQRPAT------- 569 R + +V++ ++ G+AL ++ +AG+ R Q G R A Sbjct: 523 GRLDARVVLVGDTRQHSGVARGTALKLLECEAGLAPFAVTGIRRQHGRYREAVGLLSEGR 582 Query: 570 ------------IISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSE 617 + E D +A ++ + + G+ + E +T+ IR+E Sbjct: 583 AVDALDVLDRLGWVRECDHEAGAQLIAAEYLLAHREGKSVLVVSPTHAEGERVTRTIRTE 642 Query: 618 LKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWN--PETRSHDRYVIDRVT 675 L + VL L R Y PGMV++ + P RS R+V+ V+ Sbjct: 643 LLSAQVLSGEPRFFPQLVAANFTIAERSDAANYEPGMVLQFFRHAPGFRSASRWVV--VS 700 Query: 676 AQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPG---LRVSGG 732 A + L ++DA G+ ++ + + + +F ++ + G+R+R+T R+ G Sbjct: 701 AAPNVLRVQDASGDDALLPL-HFANRFQVFESRELELRIGDRVRLTSNERTRDGHRLDNG 759 Query: 733 DRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSAT-VFAS 791 V + + + G + P+ + +G+ T S + V S Sbjct: 760 AHGVVKRFTSNGDIQLESG---------AVVPYDVGHVAHGYCVTSHASQGRTVDQVLVS 810 Query: 792 VTQMAMDN----ATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGET 847 + + ++R V L + P + + Sbjct: 811 QSAESFAASSVEQLYVSVSRGRERVLLITDDKAGLRLAAERSDPRPAATEIFAPSALWRS 870 Query: 848 SLETAISHQKSA 859 + I + Sbjct: 871 WAQRRIVREPQP 882 Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats. Identities = 142/752 (18%), Positives = 248/752 (32%), Gaps = 88/752 (11%) Query: 768 LKLENGWVETP--GHSVSDSATVFASVTQMAMDNATLNG----LARSGRDVRLYSSLDET 821 L V T V ++ + +D + + Sbjct: 212 RHLGYDTVRTSKGWELAGVPRRVLEEFSRRTKLIERVAEEQEITNAHAKDAIGALTRERK 271 Query: 822 RTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLA 881 TA L++ + + + + A+H A+ ++ A Sbjct: 272 STALSLSKLRARWRARITGDELRALELVAAKALDRPPRNLNAVRDALHYAVEHCFERESA 331 Query: 882 FSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEK 941 S+ LL A E+ G L+ Y +R E Sbjct: 332 VSVDRLLAVALRRGVGEVAVNEIRAAFKGL---GLLVQERDGVEYA----TAREVLAEEI 384 Query: 942 SILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQ 1001 +L +G+ L+ E L++ Q+AA +L + DR T+++G AGVGKT Sbjct: 385 RMLAFARDGRGICARLVPNHSPIAREWLSNEQKAAVAHVLGSHDRVTLLRGAAGVGKTAL 444 Query: 1002 FRAVMSAVNMLPESERPRVVGLGPTHRAVG-EMRSAGVD-AQTLASFLHDTQLQQRSGET 1059 + A+ E RV+ L P+ A +R+ G A T+A FL D + Q+R+ Sbjct: 445 MIEAVEAI----EKSGTRVIPLAPSAAASRGVLRAEGFSSADTVARFLVDAEFQERA--- 497 Query: 1060 PDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRS 1119 + +DE+ ++G +A + R V GDT Q +A G +L + + Sbjct: 498 ---RGHVIWVDEAGLLGTVALAALFDTAGRLDARVVLVGDTRQHSGVARGTALKLLECEA 554 Query: 1120 AADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEF 1179 + I RQ REAV L AL L+ + Sbjct: 555 GLAPFAVTGIRRQHGRYREAVGLLSEGRAVDALDVLDRL--------------------- 593 Query: 1180 SHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRV 1239 G + I +Y + L+V+ + + Sbjct: 594 ------------------GWVRECDHEAGAQLIAAEYL-LAHREGKSVLVVSPTHAEGER 634 Query: 1240 LNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVD----NVYH 1295 + I A L E P L AN E + +E Sbjct: 635 VTRTIRTELLSAQVLSGEPRFFPQLVAANFTIAERSDAANYEPGMVLQFFRHAPGFRSAS 694 Query: 1296 RIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERG 1355 R +S ++ +QDA G+ L+ A ++ + + GDR+R T ++R R Sbjct: 695 RWVVVSAAPNVLRVQDASGDDALLPLHFAN--RFQVFESRELELRIGDRVRLTSNERTRD 752 Query: 1356 ---YVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETF 1412 + V + S+G E H+ Y +T+H +QG + Sbjct: 753 GHRLDNGAHGVVKRFT------SNGDIQLESGAVVPYDVGHVAHGYCVTSHASQGRTVDQ 806 Query: 1413 AIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEP 1472 + + E + E YV++SR ++ V + TD++ G A + + A ++F P Sbjct: 807 VLVSQSAESFAA--SSVEQLYVSVSRGRERVLLITDDKAGLRLAAERSDPRPAATEIFAP 864 Query: 1473 K------PDREVMNAERLFSTARELRDVAAGR 1498 R ++ + AR + +V GR Sbjct: 865 SALWRSWAQRRIVREPQPNKRARGVAEVLVGR 896 >UniRef50_A8ZLG3 Putative uncharacterized protein n=3 Tax=Acaryochloris marina MBIC11017 RepID=A8ZLG3_ACAM1 Length = 1317 Score = 434 bits (1114), Expect = e-119, Method: Composition-based stats. Identities = 160/919 (17%), Positives = 305/919 (33%), Gaps = 101/919 (10%) Query: 1 MMSIAQVRSA-GSAGNYYTDKDNYYVLGS-----MGERWAGRGAEQLGLQGSVDKDVFTR 54 M++I + S YYT +++YY W G A ++FT Sbjct: 1 MLNITTINSNIKDGAKYYTKEESYYSQNKEIQSMTQTEWFGSMAP----DEHYSAELFTE 56 Query: 55 LLEGRLPDGADLSRMQDGSNRHRPGYDLTFSAP-KSVSM-MAMLGGDKRLIDAHNQAVDF 112 + G LP+G + G + R YDLTFS P KS+SM + GDKRL +AH + + Sbjct: 57 MFYGNLPNGGRMRNEVKGKGQERLAYDLTFSVPGKSLSMSIHGPNGDKRLWNAHVETIKE 116 Query: 113 AVRQVE-ALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVT-QHNG 170 + VE A+ R+ + + V T ++ AL +H +R +P +HTH V+ N T +G Sbjct: 117 VLAIVEERYAAARIQANNDRQVVKTSSIAAALVHHHETRAGDPHVHTHVVLFNGTLCPDG 176 Query: 171 EWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP 230 E++ + + + ++G G LY +K+ +V+ LGYE +++ G Sbjct: 177 EYRAMYIEPLIRSGI----------LGDLYDQKMALKVQELGYEIRETKTG--FDLAGAT 224 Query: 231 VE---AFSGRSQTIREAVGEDA---SLKSRDVAALDTRKSKQ-HVDPEIKMAEWMQTLKE 283 E FS RS I + + E + K+R A +TR K E K W + + Sbjct: 225 DEQIKKFSKRSTEIEDYLKEKGWSNTPKNRQKATFETRIGKDITESLEQKQERWGEEMAS 284 Query: 284 TGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLART 343 GF L + ++ + AI L+E + F D+ Sbjct: 285 VGFH------------GLTPSDQPIKPESQETPRELLDAAIEHLTEHQSSFNAEDIQRFV 332 Query: 344 VGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALS--RDIMK 401 L + L L G T+ V + + + +D Sbjct: 333 FSHLRSFDEKPLNTEIS-----KHPDL--LTAWDGRLTTQTAVDRDQRILDIVLFKDSKV 385 Query: 402 QNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGR 461 + +G ++A+ L I+ G G G+ + Sbjct: 386 EPLNPTADFSDTMLNSGQAEAMKRLLSFSDQYQILKGLAG-TGKTTALGLAREQLPPD-V 443 Query: 462 EVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTL 521 ++++ A ++ + + L G I ++ I D+ + + Sbjct: 444 DIKVFAPTHNAKHQISEAFGLKGATIASF--VVSPPPEGANQLWIFDEAGMFGSADMEKI 501 Query: 522 LDGAARHNVQVLITDSGQR---TGTGSALMAMKDAGVNTYRWQGGEQRPAT--------- 569 L A + + + G+ + + + GV +R ++ Sbjct: 502 LQKAEQVGARCWFVGDTGQNASISAGAPVRMLMNRGVTVHRLDQIIRQQNKEQLRAVELI 561 Query: 570 -----------------IISEPDRNVRYARLAGDFAASVKAGEESVAQVS-GVREQAILT 611 I D + + K + V E+ T Sbjct: 562 ADGHGVEALRALEKNGNIREVEDSETKLTSAVAYYMEKPKHRRDKTLVVVGTNAERFGFT 621 Query: 612 QAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNP---ETRSHDR 668 + +R+EL +G L T L L + + Y G ++ T+ Sbjct: 622 KLLRAELIKEGQL-TKNTEFTQLQRRNLSKAQKKRAENYNKGDLLVLHKKHRLYTQLQTH 680 Query: 669 YVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLR 728 + + L ++ G + + + + + + +A G++LR T Sbjct: 681 VPYKVLAVEGKKLKVQSLGGRNFTINPAEHELT-QAYTTRRNQIAVGDKLRFTSTNMKKD 739 Query: 729 VSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDS--- 785 + L + + TV L ++ L++++ W T S + Sbjct: 740 IHNNAFLTCTDIKDQIATV-KDKHGRVHHLDLTKP----LQIDHDWATTTYRSQGSTNSE 794 Query: 786 ATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAG 845 AS+ + + G++R+ + D ++ E +A+ + E + Sbjct: 795 TLYIASLNPTSARESFYVGISRNKTKYLTVFTEDLSKLQEWVAQSNAQENALEILFDPHA 854 Query: 846 ETSLETAISHQKSALHTPA 864 S + L Sbjct: 855 GWSPTYDKEERPFGLDEDT 873 Score = 280 bits (716), Expect = 3e-73, Method: Composition-based stats. Identities = 154/921 (16%), Positives = 302/921 (32%), Gaps = 121/921 (13%) Query: 868 IHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYG 927 + A+ + + +F+ D+ S + + ++ Sbjct: 309 LDAAIEHLTEHQSSFNAEDIQRFVFSHL----------RSFDEKPLNTEISKHPDLLTAW 358 Query: 928 TGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRF 987 G L ++ + + ++ IL +L V PL L SGQ A + +L SD++ Sbjct: 359 DGRLTTQTAVDRDQRILDIVLFKDSKVEPLNPTADFSDTM-LNSGQAEAMKRLLSFSDQY 417 Query: 988 TVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA-GVDAQTLASF 1046 +++G AG GKTT + + PTH A ++ A G+ T+ASF Sbjct: 418 QILKGLAGTGKTTALGLAREQLP-----PDVDIKVFAPTHNAKHQISEAFGLKGATIASF 472 Query: 1047 LHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAI 1106 + P+ +N L++ DE+ M G+ DM + G R GDT Q +I Sbjct: 473 VVSPP--------PEGANQLWIFDEAGMFGSADMEKILQKAEQVGARCWFVGDTGQNASI 524 Query: 1107 APGQPFRLQQTRSAADVAIMKEIVRQ-TPELREAVYSLINRDVERALSGLESVKPSQVPR 1165 + G P R+ R V + +I+RQ E AV + + AL LE + Sbjct: 525 SAGAPVRMLMNR-GVTVHRLDQIIRQQNKEQLRAVELIADGHGVEALRALEKNGNIR--- 580 Query: 1166 QEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEARE 1225 + T + V Y + R+ Sbjct: 581 -----------------------------------EVEDSETKLTSAVAYYMEKPKHRRD 605 Query: 1226 QTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRD 1285 +TL+V N +R ++ K G+L K L N+ + +R + Sbjct: 606 KTLVVVGTNAERFGFTKLLRAELIKEGQLTKN-TEFTQLQRRNLSKAQKKRAENYNKGDL 664 Query: 1286 ALVLVDNVYHRIAGISKDDGLITLQDAE-------GNTRLISPREAVAEGVTLYTPDTIR 1338 ++ + + ++ ++ + G I+P E E YT + Sbjct: 665 LVLHKKHRLYTQLQTHVPYKVLAVEGKKLKVQSLGGRNFTINPAE--HELTQAYTTRRNQ 722 Query: 1339 VGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAY 1398 + GD++RFT ++ ++ N+ T T + T+ D + ID + Sbjct: 723 IAVGDKLRFTSTNMKKDIHNNAFLTCTDIKDQIATVKDKHGRVHHLDLTKPL--QIDHDW 780 Query: 1399 AITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMK-QHVQVYTDNRQGWTDAI 1457 A T + +QG++ + + + + ES YV +SR K +++ V+T++ + + Sbjct: 781 ATTTYRSQGSTNSETLYIASL----NPTSARESFYVGISRNKTKYLTVFTEDLSKLQEWV 836 Query: 1458 NNAVQKGTAHD-VFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPARFI 1516 + + A + +F+P + + ++ +G+ + + Sbjct: 837 AQSNAQENALEILFDPHAGWSPTYDKEERPFGLDEDTWTE----MKGSGIHPNLLTSNHL 892 Query: 1517 APGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGEGRVKGSGDAQFVALQG 1576 + P PY ++ N A + T + +G+ + ++G Sbjct: 893 RS--EAPDPYGSI---RDNPLVAALLEAEFTKSKYGKGQEVTGKMKQYL---HGASTVEG 944 Query: 1577 SRNGESLLADNMQDGVRIARDNPDSGVVVRIAGEGR---------PWNPGAITGGRVWGD 1627 + + ++ + P P G + Sbjct: 945 -HTVYDHEKEYGRIAQGGGWIGYGGVDLLSVIEGNPQPSQYCQVKPKTPRIFDGKENKYE 1003 Query: 1628 IPDNSVQPGAGNGEPVTAEVLAQRQAEEAIRRETERRADEIVRKMAE----------NKP 1677 P Q + E+ + I E R I + K Sbjct: 1004 TPKGVDQQV--FLPHIPHEIEERIYQRNGISPTAEERTKGIWSVADKYNLPLVITEGLKK 1061 Query: 1678 DLPDGKTEQAVREIAGQERDRAAITEREAALPEGVLREPQRVREAV-REIA---RENLLQ 1733 + G A E + LP+ L E + R+I ++ Sbjct: 1062 TWASLSQGHLTVGLPGVTALYRAKNEHDERLPQRELTEYGKALAKPGRQITLAFDQDTKV 1121 Query: 1734 ERLQQMERDMVRDLQKEKTLG 1754 + + RD+VR ++ +T G Sbjct: 1122 SSILNVRRDLVRTIELMQTRG 1142 >UniRef50_A8ZL36 Putative uncharacterized protein n=2 Tax=Acaryochloris marina MBIC11017 RepID=A8ZL36_ACAM1 Length = 1861 Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats. Identities = 185/901 (20%), Positives = 323/901 (35%), Gaps = 99/901 (10%) Query: 29 MGERWAGRGAEQLGLQGSVDKDVFTRLLEGRLPD------GADLSRMQ----DGSNRHRP 78 W G A L V ++ F L G LP+ G + R++ + ++ R Sbjct: 2 STAVWVGSNAIVQKLGTYVKREDFKALSRGFLPEALKSVAGGAVQRIRGKKPNEEDKERH 61 Query: 79 GYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEA-LASTRVMTDGQSETVLTG 137 +D+ SAPKSVSM L GD R+ DAH +AV +E A TR+ +G V TG Sbjct: 62 AHDVVLSAPKSVSMALHLEGDNRIFDAHMEAVLETFELLEREYAQTRIQVNGVRSVVDTG 121 Query: 138 NLVMALFNHDTSRDQEPQLHTHAVVANVTQ-HNGEWKTLSSDKVGKTGFIENVYANQIAF 196 N++ AL H TSRD + QLHTH ++ N TQ +G W++LS +K+ A Sbjct: 122 NMIAALMPHHTSRDGDMQLHTHMLIMNGTQGPDGRWRSLSHEKL----------AQAKWI 171 Query: 197 GRLYREKLKEQVEALGYETEVVGKHGMWEMPGV---PVEAFSGRSQTIREAVGEDA---S 250 G YR+KL E+V+ LGY +E+ G VE FS R + I +AV ++ + Sbjct: 172 GSFYRQKLAEKVQRLGYRIYQT--KDAFELVGYDRSDVEVFSKRHRAIVKAVRDEGLEVT 229 Query: 251 LKSRDVAALDTRKSKQHVD--PEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGP 308 +++ + L TRK+K+ V EI W + + G P Sbjct: 230 PENKKLKVLPTRKAKRGVGKKLEIIQDHWREEARSQGVGHPVL------------AEPLA 277 Query: 309 ASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISRE 368 D + V AI +E F D+ A L + +E+ I + + Sbjct: 278 VLPDPGRARYEVESAIRHYAEWSSIFEKDDIYAYVFKTLKRQGMAMEQVDEAIKQ---SK 334 Query: 369 QLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVH----PEKSVPRTAGYSDAVS 424 +LIP+DR FT+ V +E + Q + V SV + + Sbjct: 335 ELIPVDRG---FTTVTAVEEEAQIHQRWMAGQGQAQPMVAHPSLAGISVKLNEDQAKTIL 391 Query: 425 VLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSG 484 I G G G+ + L + G ++ + + ++ + ++ Sbjct: 392 NTLTSTDHYQIWQGFPGV-GKSRTLGVLKTLLNGSGFTIRGFSPTIPAAKKLQDELGITT 450 Query: 485 ELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR---T 541 + +L + +P ++D+ +S ++ +L+ A QV+ + Sbjct: 451 NTV--EHLVLHQVDDSPNQVWLIDEAGMMSRRQMKVILEKAEAVKAQVIFVGDAGQNSSI 508 Query: 542 GTGSALMAMKDAGVNTYRWQGGEQRPATIISEP--------------------------D 575 G+ M+ G T+R + ++ + + Sbjct: 509 EAGNPFKFMQANGATTHRIEEIIRQKVDVQKQAVELIARGRGIAALELLDANGYVIESGC 568 Query: 576 RNVRYARLAGDFAASV-KAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTAL 634 + A + A K EE++ E+ QAIR K G LG + L Sbjct: 569 KAEMAQAAADQYLALPLKEQEETLIIAGTNEERLDTEQAIRRGEKQAGRLG-ESSKIVQL 627 Query: 635 SPVWLDSRSRYLRDMYRPGMVMEQWNP----ETRSHDRYVIDRVTAQSHSLTLRDAQGET 690 L + D YR G + + + Y +++ + L + G Sbjct: 628 KSRNLSIEQKRRVDWYRKGDYVRLLQTSHTASIKRGELYKVEK--REGDELVVSSFGGRL 685 Query: 691 QVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVP 750 + + ++ K VA G++LR T I G +L V ++ M V Sbjct: 686 YRFKPAKYKLK-EVYSAHKFDVAVGDKLRWTTTIKENNWINGQQLTVTALDGLNMKVR-D 743 Query: 751 GRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNA-TLNGLARSG 809 +P++ AL+ + W S S T+ + L ++R Sbjct: 744 HEGRSHDVPLTQPL--ALEYDRVWTSYRSQSGSKKRTIVITTNDRTSSREPFLVDISRQE 801 Query: 810 RDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIH 869 ++ +Y+ + + + T + + S + + H Sbjct: 802 HELTVYTESLNKLRNRVAKSNAQKSALDLIEGTYGNQRTTTADHQRASSPVSPTHGRDHH 861 Query: 870 L 870 L Sbjct: 862 L 862 Score = 312 bits (798), Expect = 8e-83, Method: Composition-based stats. Identities = 140/868 (16%), Positives = 283/868 (32%), Gaps = 106/868 (12%) Query: 834 TVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKS 893 + G A A+ + A+ F D+ Sbjct: 255 QDHWREEARSQGVGHPVLAEPLAVLPDPGRARYEVESAIRHYAEWSSIFEKDDIYAYVFK 314 Query: 894 FA-AEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKE 952 +G ++ I + +L+ VD + + E E I + + G+ Sbjct: 315 TLKRQGMAMEQVDEAIK---QSKELIPVDRG-------FTTVTAVEEEAQIHQRWMAGQG 364 Query: 953 AVMPLM-ERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNM 1011 P++ + KL Q L ++D + + QG+ GVGK+ + Sbjct: 365 QAQPMVAHPSLAGISVKLNEDQAKTILNTLTSTDHYQIWQGFPGVGKSRTLG----VLKT 420 Query: 1012 LPESERPRVVGLGPTHRAVGEMR-SAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLD 1070 L + G PT A +++ G+ T+ + + D N ++L+D Sbjct: 421 LLNGSGFTIRGFSPTIPAAKKLQDELGITTNTVEHLVL--------HQVDDSPNQVWLID 472 Query: 1071 ESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIV 1130 E+ M+ M A + + GD Q +I G PF+ + A ++EI+ Sbjct: 473 EAGMMSRRQMKVILEKAEAVKAQVIFVGDAGQNSSIEAGNPFK-FMQANGATTHRIEEII 531 Query: 1131 RQTPELR-EAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAE 1189 RQ +++ +AV + AL L++ Sbjct: 532 RQKVDVQKQAVELIARGRGIAALELLDANG------------------------------ 561 Query: 1190 AQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVRE 1249 + +A Y + +E+TLI+ NE+R I + Sbjct: 562 --------YVIESGCKAEMAQAAADQYLALPLKEQEETLIIAGTNEERLDTEQAIRRGEK 613 Query: 1250 KAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALV--------LVDNVYHRIAGIS 1301 +AG LG+ +V + + N+ + RR+ + + + +++ Sbjct: 614 QAGRLGESSKIVQLK-SRNLSIEQKRRVDWYRKGDYVRLLQTSHTASIKRGELYKVEKRE 672 Query: 1302 KDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSV 1361 D+ ++ + RL + A + +Y+ V GD++R+T + +E ++ Sbjct: 673 GDELVV----SSFGGRLYRFKPAKYKLKEVYSAHKFDVAVGDKLRWTTTIKENNWINGQQ 728 Query: 1362 WTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEG 1421 TVTA+ G ++ + D + P + ++ T++ +Q S+ I + Sbjct: 729 LTVTALDGLNMKVRDHEGRSHDVPLTQPLA--LEYDRVWTSYRSQSGSKKRTIVI----T 782 Query: 1422 NRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNA 1481 + E V +SR + + VYT++ + + + + +A D+ E + Sbjct: 783 TNDRTSSREPFLVDISRQEHELTVYTESLNKLRNRVAKSNAQKSALDLIEGTYGNQRTTT 842 Query: 1482 ERLFSTARELRDVAAGRAVLRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGI 1541 + + L Q+ G ++ P NG + Sbjct: 843 ADHQRASSPVSPTHGRDHHLDQSSRRGPSPEPTHPRREQRTQVPSQGADQHHSNGSQSR- 901 Query: 1542 WLNPLTTDDGNGLRGFSGEGRVKGSGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDS 1601 + G++G G G QG+R G L + R+A D+ Sbjct: 902 -----SQPVHPGIQGGDGIQETLGYER----VDQGTRQGNGQLKVENRGYQRLAVDDERQ 952 Query: 1602 GVVVRIA-----GEGRPWNPGAITGGRVWGDIPDNSVQ-------PGAGNGEPVTAEVLA 1649 G+ R G+ P WG + + +LA Sbjct: 953 GIGGRRGDHADQGQAPPTRTTQDGRSTEWGATSSDIANWVMHWSEENELAASGLEDHLLA 1012 Query: 1650 QRQAEEAIRRETERRADEIVRKMAENKP 1677 + E++ + E + E + ++AE Sbjct: 1013 LDKDIESLTQSLEPYSFEGLEELAEIVE 1040 >UniRef50_B8GZQ5 DNA relaxase/conjugal transfer nickase-helicase trwC n=3 Tax=Alphaproteobacteria RepID=B8GZQ5_CAUCN Length = 936 Score = 430 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 225/896 (25%), Positives = 342/896 (38%), Gaps = 89/896 (9%) Query: 16 YYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRLPDGADLSRMQDGSNR 75 YY D + G+ RW G GA LGL+G VD + F +LL+G L D L +D + Sbjct: 39 YYEADDYHAEGGAAPSRWQGSGAAALGLEGEVDPERFRQLLDGVLSDHVALGARRDEGRQ 98 Query: 76 HRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEALA-STRVMTDGQSETV 134 HRPG+DLT SAPKS+S+MA++ GD+RL AH AV+ A+ E A TR+ + V Sbjct: 99 HRPGWDLTLSAPKSISIMALVAGDRRLHAAHAAAVEAALAFTERHAGGTRIRDGERVAHV 158 Query: 135 LTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH-NGEWKTLSSDKVGKTGFIENVYANQ 193 TG L MA F H+TSR Q+PQLHTHAV+ N+T+ G W++L S +Y Q Sbjct: 159 RTGALAMATFQHETSRAQDPQLHTHAVILNMTRDLEGTWRSLDS---------RALYQLQ 209 Query: 194 IAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP---VEAFSGRSQTIREAVG---- 246 G +YR++L V ALGY E VGK M+E+ VP EAFS R++ + + Sbjct: 210 KTIGEVYRQELAGAVRALGYAIE-VGKESMFEISDVPASVREAFSERARQVEAHLATKGL 268 Query: 247 --EDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTL 304 A+ + + A L TR SK+ D W GF A R + D Sbjct: 269 TRATATAEEKQAATLYTRASKKAADRAELSRAWRVEADGLGFSSEARRSLLTEALDRAEA 328 Query: 305 TPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEA 364 + + Q AV A L ER+ F+ ++ G A +D+ Sbjct: 329 SKAIRDRGAVLAQDAVRFAAEKLGERQAIFSRAELEREA-GRKAIGLATRTEIMAAVDKR 387 Query: 365 ISREQL--------IPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHP------- 409 QL I LD E FT+ + E + + R+ V P Sbjct: 388 QQSHQLEARALRSPIGLDLEG--FTTDRAIAHEKRLLEIEREGRNALAPIVPPIEASRII 445 Query: 410 --------EKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGR 461 E+ + + A + R ++ V G G A +A L A EQG Sbjct: 446 NAASLAASERGLAWSDDQRRATKAVLTSRSAVVGVQGFAGTAKTTTVLATLAKAAAEQGY 505 Query: 462 EVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTL 521 +V+ +A + + + + L G I + IVD+ +S ++ L Sbjct: 506 QVKALAPSASAAITLGEALDLEGRTIARHLVERPNARPSARELWIVDEASLVSARDMARL 565 Query: 522 LDGAARHNVQVLITDSGQR---TGTGSALMAMKDAGVNTYRWQGGEQRPA---------- 568 LD A R + L+ + G G+A ++DAG+ T ++ Sbjct: 566 LDEAQRRGARTLLVGDAHQLGSVGAGAAFRQLQDAGLETAHLTKIVRQSNTLTLEAVEAT 625 Query: 569 -----------------TIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVRE-QAIL 610 II R A +A FA A + RE + L Sbjct: 626 LAGHARRAFDALDRGGGQIIEAQSVEDRQALIAAHFAQLDSAQRRRTLIIDPSREGREQL 685 Query: 611 TQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWN----PETRSH 666 T IR+EL G LG VT+T+L L R Y PG ++ Sbjct: 686 TARIRAELIAAGHLGKAAVTVTSLVAKDLTQAERKEAGSYAPGDIVTFARTLTGKAVAKD 745 Query: 667 DRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPG 726 Y + V A+ ++TL D + S F P + G+R+ T Sbjct: 746 TAYEVQAVDARRRTVTLSDGRDARIDWAPHRWGS-AEAFEPVDRELRQGDRIEFTRNNMR 804 Query: 727 LRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVET--PGHSVSD 784 L G + ++ S+ +A V + + + +V+T + Sbjct: 805 LHQVNGLQGEIVSLDVEARKAQV-RTDRGHIRTLDLNALQDRHFRHAYVQTAFAAQGRTT 863 Query: 785 SATVFASVTQMAM---DNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVS 837 +F + +Q + ++R+ + + AR Sbjct: 864 DHVLFHAESQRSNLIDQATLYVAISRARHGATIVTDDRAKVIRGVEARSGRRLTAL 919 Score = 252 bits (643), Expect = 9e-65, Method: Composition-based stats. Identities = 137/719 (19%), Positives = 237/719 (32%), Gaps = 81/719 (11%) Query: 789 FASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETS 848 T A + R+ + + L E S + Sbjct: 268 LTRATATAEEKQAATLYTRASKKAADRAELSRAWRVEADGLGFSSEARRSLLTEALDRAE 327 Query: 849 LETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEI 908 AI + + L A + A + ++ FS +L EA A TE+ + Sbjct: 328 ASKAIRDRGAVLAQDA---VRFAAEKLGERQAIFSRAELEREAGRKAIGLATRTEIMAAV 384 Query: 909 NAQIKRGDL--LYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPG--- 963 + + + L + G + + EK +L EG+ A+ P++ + Sbjct: 385 DKRQQSHQLEARALRSPIGLDLEGFTTDRAIAHEKRLLEIEREGRNALAPIVPPIEASRI 444 Query: 964 ---------ELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPE 1014 E + QR AT+ +L + VQG+AG KTT V++ + Sbjct: 445 INAASLAASERGLAWSDDQRRATKAVLTSRSAVVGVQGFAGTAKTTT---VLATLAKAAA 501 Query: 1015 SERPRVVGLGPTHRAVGEMRSA-GVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESS 1073 + +V L P+ A + A ++ +T+A L + + L+++DE+S Sbjct: 502 EQGYQVKALAPSASAAITLGEALDLEGRTIARHLVERP------NARPSARELWIVDEAS 555 Query: 1074 MVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQT 1133 +V DMAR G R + GD QL ++ G FR Q + + A + +IVRQ+ Sbjct: 556 LVSARDMARLLDEAQRRGARTLLVGDAHQLGSVGAGAAFRQLQD-AGLETAHLTKIVRQS 614 Query: 1134 PEL-REAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQ 1192 L EAV + + RA L+ + Q Sbjct: 615 NTLTLEAVEATLAGHARRAFDALDRGGGQIIEAQS------------------------- 649 Query: 1193 KAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAG 1252 I + R +TLI+ E R L + I AG Sbjct: 650 ------------VEDRQALIAAHFAQLDSAQRRRTLIIDPSREGREQLTARIRAELIAAG 697 Query: 1253 ELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLV--------DNVYHRIAGISKDD 1304 LGK V V L ++ E + ++ + + + + Sbjct: 698 HLGKAAVTVTSLVAKDLTQAERKEAGSYAPGDIVTFARTLTGKAVAKDTAYEVQAVDARR 757 Query: 1305 GLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTV 1364 +TL D +P + P + GDR+ FT+++ V + Sbjct: 758 RTVTLSDGRDARIDWAPHR--WGSAEAFEPVDRELRQGDRIEFTRNNMRLHQVNGLQGEI 815 Query: 1365 TAVSGDSVTLSDGQQTREIRPGQEQAEQ--HIDLAYAITAHGAQGASETFAIALEGTEGN 1422 ++ ++ IR A Q H AY TA AQG + L E Sbjct: 816 VSLDVEARKAQVRTDRGHIRTLDLNALQDRHFRHAYVQTAFAAQGRTTDHV--LFHAESQ 873 Query: 1423 RKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAI-NNAVQKGTAHDVFEPKPDREVMN 1480 R + + YVA+SR + + TD+R + + ++ TA + + Sbjct: 874 RSNLIDQATLYVAISRARHGATIVTDDRAKVIRGVEARSGRRLTALGAEGSGREAGLDQ 932 >UniRef50_Q0KJG8 DNA helicase n=3 Tax=Sphingomonadaceae RepID=Q0KJG8_9SPHN Length = 1014 Score = 427 bits (1097), Expect = e-117, Method: Composition-based stats. Identities = 220/974 (22%), Positives = 350/974 (35%), Gaps = 151/974 (15%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMG--ERWAGRGAEQLGLQGSVDKDVFTRLLEG 58 M SIA VRS+G A +Y+ + DNYY WAG GA LGL+G+V +D F +L G Sbjct: 1 MHSIAAVRSSGGAADYFAN-DNYYTAQESAQAGVWAGEGARALGLEGTVGRDAFEAILNG 59 Query: 59 RLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQV- 117 LPDG + +++ R G DLTFS PKS S++A++ GD+R++DAH AV + Q+ Sbjct: 60 HLPDGDKVGQVEG----RRLGLDLTFSMPKSASILALVSGDRRILDAHMAAVRSTMSQLV 115 Query: 118 -EALASTRVMTDGQS-ETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH-NGEWKT 174 + LA R +S E TGNLV ALF HDTSR +PQ H HAVVAN+T+ G WK Sbjct: 116 EKQLAEGRNYERSRSGEPEKTGNLVYALFAHDTSRALDPQGHIHAVVANLTRDLKGNWKA 175 Query: 175 LSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP---V 231 L + ++ K N G+ Y + Q++ LGYETE GKHG +E+ GVP + Sbjct: 176 LWNGEIWK---------NNTTIGQFYHAAFRAQLQKLGYETEASGKHGAFEIKGVPTAVI 226 Query: 232 EAFSGRSQTIREAVGEDASLKS--RDVAALDTRKSKQH-VDPEIKMAEWMQTLKETGFDI 288 +AFS R+ I + E + + + L TR K D W E GFD Sbjct: 227 KAFSTRANEIEAKIAETGATRLATKKQITLYTRDPKLAVEDRAALAEGWKTRAAELGFDG 286 Query: 289 RAYRDAADQRADLR---------------------------------TLTPGPASQDGPD 315 + A RA + S + Sbjct: 287 KPLIAEAMARAAHQVRPTLRETASQAFAEVAERISAAMRPPSALAVSGPAALFLSAETIK 346 Query: 316 VQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIP--- 372 Q A AI LSER+ F+ +L+ +G + I E + LIP Sbjct: 347 AQHATASAIRHLSEREAAFSPQAILSAALG-FQIKGLEGGAVALRIGELVREGHLIPGKS 405 Query: 373 --LDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPE-------------------- 410 LD L T+ + E + + RV + PE Sbjct: 406 DRLDGHYDLVTTPAALGREQQILDRIDAGAGKGRVFMAPEVAMVRLQAAARELGIERAGS 465 Query: 411 KSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADR 470 AG A + + + G G AG+ + L + +G ++ +A Sbjct: 466 DGWQLNAGQLAAGVAVLSGKDRFLNIQGVAG-AGKSTLLGALDKVLSAEGVKLVGLAFQN 524 Query: 471 RSQMNMK------------QDERLSGELITGRRQLLEGMAFT-------------PGSTV 505 + +++ ++ + I G A + + Sbjct: 525 KMVADLRGGGSGMMTAEQMREAGIEAWTIASFVNRYAGPAAQGQGERFETARTALQNTVI 584 Query: 506 IVDQGEKLSLKETLTLLDGAARHN-VQVLITDSGQRTGT---GSALMAMKDAGVNTYRWQ 561 I D+ +S ++ +L A R + + Q+ G + AG T R Sbjct: 585 ITDESSMVSSRDMASLTMIAERLDLAKAPFIGDRQQLSAIEQGKMFAVSQAAGQATVRMD 644 Query: 562 GGEQRP-------------------------ATIISEPDRNVRYARLAGDFAASVKAGEE 596 ++ A D+ A A + + Sbjct: 645 ENIRQKGSPLLLAVAGLSNEGHAGLALDLLAAHGRVIEDKADHIAAAADLWLSLAPEERA 704 Query: 597 SVAQ-VSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMV 655 A +G ++ + ++ L +G L P V + L YRPG V Sbjct: 705 RTAIFTAGRDDRTRINGLVQQGLLKEGSLAGPGVPFSTLQSANATREEMRFASTYRPGQV 764 Query: 656 MEQWNPETRSH-DRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWS-----LFRPEK 709 +E R D V + G+ +V+ +D L+ + Sbjct: 765 LEARMDVRELGLRRGEYDVVAIGRDGKVTLERDGKRKVIDPDRIDPQHRFDRIGLYDRKD 824 Query: 710 MPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALK 769 + + GE + K ++ +V S + A+T+ + TLP SD L Sbjct: 825 ITLHGGETVFWREKDGPRDIAKSTYAKVVSATGQAVTLELAD-KRQITLPSSDPMLRRLD 883 Query: 770 LENGWVETPGHSVSDSATVFASVTQM---AMDNATLNGLARSGRDVRLYSSLDETRTAEK 826 L ++ + + ++ A R+ D+R+ ++ E + Sbjct: 884 LGYALNAHMAQGMTQAQAIEVISSRQRNLATQRTQNVLNTRATDDMRVVTNDLEALKFQL 943 Query: 827 LARHPSFTVVSEQI 840 + T E + Sbjct: 944 DRTPGNKTSALETV 957 Score = 257 bits (656), Expect = 3e-66, Method: Composition-based stats. Identities = 149/721 (20%), Positives = 262/721 (36%), Gaps = 100/721 (13%) Query: 858 SALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDL 917 SA AQ A A+ + ++ AFS +L+ A F +G + I ++ G L Sbjct: 341 SAETIKAQHATASAIRHLSEREAAFSPQAILSAALGFQIKGLEGGAVALRIGELVREGHL 400 Query: 918 LY-VDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPG------------- 963 + L+ + A+ E+ IL I G M Sbjct: 401 IPGKSDRLDGHYDLVTTPAALGREQQILDRIDAGAGKGRVFMAPEVAMVRLQAAARELGI 460 Query: 964 ----ELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPR 1019 +L +GQ AA +L DRF +QG AG GK+T A++ + +E + Sbjct: 461 ERAGSDGWQLNAGQLAAGVAVLSGKDRFLNIQGVAGAGKSTLLG----ALDKVLSAEGVK 516 Query: 1020 VVGLGPTHRA-------------VGEMRSAGVDAQTLASFLHDTQLQQRSGETPD----- 1061 +VGL ++ +MR AG++A T+ASF++ G+ Sbjct: 517 LVGLAFQNKMVADLRGGGSGMMTAEQMREAGIEAWTIASFVNRYAGPAAQGQGERFETAR 576 Query: 1062 --FSNTLFLLDESSMVGNTDMARAYALIAAGG-GRAVASGDTDQLQAIAPGQPFRLQQTR 1118 NT+ + DESSMV + DMA + +A GD QL AI G+ F + Q Sbjct: 577 TALQNTVIITDESSMVSSRDMASLTMIAERLDLAKAPFIGDRQQLSAIEQGKMFAVSQAA 636 Query: 1119 SAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTE 1178 A V + + I ++ L AV L N Sbjct: 637 GQATVRMDENIRQKGSPLLLAVAGLSN--------------------------------- 663 Query: 1179 FSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRR 1238 A + + A + PE R +T I T +DR Sbjct: 664 ------EGHAGLALDLLAAHGRVIEDKADHIAAAADLWLSLAPEERARTAIFTAGRDDRT 717 Query: 1239 VLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHR-------DALVLVD 1291 +N ++ K G L V L +AN E+R ST+ + + + Sbjct: 718 RINGLVQQGLLKEGSLAGPGVPFSTLQSANATREEMRFASTYRPGQVLEARMDVRELGLR 777 Query: 1292 NVYHRIAGISKDDGLITLQDAEGNTRLISP--REAVAEGVTLYTPDTIRVGTGDRMRFTK 1349 + + I +D + +D + + + + LY I + G+ + + + Sbjct: 778 RGEYDVVAIGRDGKVTLERDGKRKVIDPDRIDPQHRFDRIGLYDRKDITLHGGETVFWRE 837 Query: 1350 SDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGAS 1409 D R ++ V + +G +VTL + + P + + +DL YA+ AH AQG + Sbjct: 838 KDGPRDIAKSTYAKVVSATGQAVTLELADKRQITLPSSDPMLRRLDLGYALNAHMAQGMT 897 Query: 1410 ETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINN-AVQKGTAHD 1468 + AI + ++ +A + V +R ++V T++ + ++ K +A + Sbjct: 898 QAQAIEVI--SSRQRNLATQRTQNVLNTRATDDMRVVTNDLEALKFQLDRTPGNKTSALE 955 Query: 1469 VFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPARFIAPGRKYPQPYVA 1528 + + + A + R+L ++ + + A G A R+ P P + Sbjct: 956 TV-GRLEVDARPANPI--EPRQLPELRMSPELKAKLDAALGPVAA---PAVRQLPVPEKS 1009 Query: 1529 L 1529 L Sbjct: 1010 L 1010 >UniRef50_Q1N8W9 TrwC protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N8W9_9SPHN Length = 1075 Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats. Identities = 204/1055 (19%), Positives = 358/1055 (33%), Gaps = 156/1055 (14%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMG--ERWAGRGAEQLGLQGSVDKDVFTRLLEG 58 M++++ +RS+ A +Y+ DNYY +W G GAE+LGL+G V D + +G Sbjct: 1 MLTVSAIRSSSGASSYFA-ADNYYSQPDTSISNQWHGAGAERLGLEGEVAPDALEAIFDG 59 Query: 59 RLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVE 118 P D ++ R G DLTF+APK VS++A+ GGD RL+ A AV + +E Sbjct: 60 INPGTGDRITPENTV---RKGVDLTFNAPKGVSLLALEGGDARLLKAQETAVMRTMAYIE 116 Query: 119 AL-ASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ-HNGEWKTLS 176 A RVM DG + V T NL A F HDT+R+QE LHTH +AN+TQ +G WK L Sbjct: 117 KYFAQARVMKDGVRQVVNTKNLTYAAFTHDTNRNQEEHLHTHVTIANMTQMPDGSWKALH 176 Query: 177 SDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPV---EA 233 +D + K N FG Y +L + V LGY+T G + +++ G+P E Sbjct: 177 NDAIWK---------NNTLFGSRYNAELNQLVRDLGYQTHATGNYAQFDITGIPQNITEL 227 Query: 234 FSGRSQTIREAVGEDASLKS--RDVAALDTRKSKQH-VDPEIKMAEWMQTLKETGFDIRA 290 S R+ I E R + LDTR K+ D + + GFD+RA Sbjct: 228 NSTRAGEIMARSAELGIKDRAGRGIVILDTRNPKEPISDRGAWLQAAYEKNLAAGFDVRA 287 Query: 291 YRDAADQRADLRTLTPGPASQDGPDVQQ-------------------------------- 318 + ++A + + R+ + + Sbjct: 288 FAESAREASQERSTILDRVVDMAHRLGERLGPNVDLSDPRMSHSISDRLFMPIEKLRTEW 347 Query: 319 AVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREK- 377 AV AI LSER+ FT +DV+ +G ER + E ++ ++ +R+ Sbjct: 348 AVASAINKLSEREAVFTQSDVIKTALG-FREPGVTPERVDQRLAELHEQKLVLHNERDDP 406 Query: 378 ----GLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEK-----------------SVPRT 416 T+ +L E V A + ++ P + + Sbjct: 407 NHPSTQITTPESLLREQQVIAGFMRGRGEGEASLSPAEAQERLLDRQAQQAGVAGGIVLN 466 Query: 417 AGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMM-------AREQGREVQIIAAD 469 AG A V G G G+ V + + + + V +A+ Sbjct: 467 AGQMVAARHALSSPDRFVAVQGDAG-TGKSTMVQAVSEVQQMVAASLPDTNKTVVGLASY 525 Query: 470 RRSQMNMKQDERLSGELITGRRQLLEGMAF-------------TPGSTVIVDQGEKLSLK 516 ++ + ++ I E +A IVD+ + + Sbjct: 526 NAMVKDLGESAKIESHTIQSFLHAYENIARYGSEDRQAEARVELADKIFIVDESSVVGTR 585 Query: 517 ETLTLLDGAARHNV-QVLITDSGQRTGT---GSALMAMKDAGVNTYRWQGGEQRPATII- 571 L+ A + + +++ + G +D+ ++T R ++ Sbjct: 586 AMHGLVTIAEKLGIEKMVFMGDRYQLAAIAQGKLFAVGQDSALDTRRMSENIRQAGNPAL 645 Query: 572 ---------------------SEPDRNVRYARLAGDFAASVKAGEESV-AQVSGVREQAI 609 + + AR + + A V G + Sbjct: 646 VEVAALAREGEFSQAFDLLGANFREDKDFVARGVEHYLSMPAADRLQTMLIVPGRALKDE 705 Query: 610 LTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSH--- 666 + + L+ +G L PE ++ L + YR GMV E + Sbjct: 706 VNITAQQLLRAEGALTGPERQVSVLEQISKTREDLRYTSSYREGMVFENARDNAGTGLPA 765 Query: 667 DRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDS-----SWSLFRPEKMPVADGERLRVT 721 Y + V+ +L R G + + L+ +++ + +GE++R T Sbjct: 766 GSYDVADVSKTEVTLVDRS-DGTIHTINPRGFSTNDDRFQAGLYIAKEISIHEGEKIRWT 824 Query: 722 GKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVS---DSPFTALKLENGWVETP 778 + + + D MTV + D L Sbjct: 825 NNDHKEGLFRSTEATITKLDGDVMTVNHKVDGVDVEKSIDLTQDKMGEYFDLAYAINADQ 884 Query: 779 GHSVSDSATVF---ASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTV 835 + + + A + +A + R ++ +Y+ + A P T Sbjct: 885 AQGATATNVIALMTAEIRALASRANAYVMMTREKDNLWIYTDDRDRLEKTLEASQPEKTS 944 Query: 836 VSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFA 895 E + L A + + +L + +++ S+ +L Sbjct: 945 SVELMNG---------------GPLDRTAAEELRQSLDDAKLEEIDRSLKELEPTPPPTP 989 Query: 896 AEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGL 930 G G T E+ + ++ D Sbjct: 990 NPGDGKTPEDRELTQPRDQREVASSDRPAPADEPR 1024 Score = 262 bits (669), Expect = 9e-68, Method: Composition-based stats. Identities = 152/784 (19%), Positives = 272/784 (34%), Gaps = 113/784 (14%) Query: 868 IHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRG-DLLYVDVAKGY 926 + A+ + ++ F+ D++ A F G + + ++ L + Sbjct: 349 VASAINKLSEREAVFTQSDVIKTALGFREPGVTPERVDQRLAELHEQKLVLHNERDDPNH 408 Query: 927 GTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGEL--------------MEKLTSG 972 + + + S E+ ++ + G+ + + L +G Sbjct: 409 PSTQITTPESLLREQQVIAGFMRGRGEGEASLSPAEAQERLLDRQAQQAGVAGGIVLNAG 468 Query: 973 QRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLP---ESERPRVVGLGPTHRA 1029 Q A R L + DRF VQG AG GK+T +AV M+ VVGL + Sbjct: 469 QMVAARHALSSPDRFVAVQGDAGTGKSTMVQAVSEVQQMVAASLPDTNKTVVGLASYNAM 528 Query: 1030 VGEMRSAG-VDAQTLASFLHDTQLQQRSGETPD-------FSNTLFLLDESSMVGNTDMA 1081 V ++ + +++ T+ SFLH + R G ++ +F++DESS+VG M Sbjct: 529 VKDLGESAKIESHTIQSFLHAYENIARYGSEDRQAEARVELADKIFIVDESSVVGTRAMH 588 Query: 1082 RAYALIAAGGG-RAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQ--TPELRE 1138 + G + V GD QL AIA G+ F + Q + D M E +RQ P L E Sbjct: 589 GLVTIAEKLGIEKMVFMGDRYQLAAIAQGKLFAVGQDSA-LDTRRMSENIRQAGNPALVE 647 Query: 1139 AVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKG 1198 + +A L + Sbjct: 648 VAALAREGEFSQAFDLLGANFRED------------------------------------ 671 Query: 1199 EAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQ 1258 V Y R QT+++ + +N + G L + Sbjct: 672 -------KDFVARGVEHYLSMPAADRLQTMLIVPGRALKDEVNITAQQLLRAEGALTGPE 724 Query: 1259 VMVPVLNTANIRDGELRRLSTWETHRDALVLVDNV-------YHRIAGISKDDGLITLQD 1311 V VL + +LR S++ DN + +A +SK + + + Sbjct: 725 RQVSVLEQISKTREDLRYTSSYREGMVFENARDNAGTGLPAGSYDVADVSKTEVTLVDR- 783 Query: 1312 AEGNTRLISPR----EAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAV 1367 ++G I+PR LY I + G+++R+T +D + G ++ T+T + Sbjct: 784 SDGTIHTINPRGFSTNDDRFQAGLYIAKEISIHEGEKIRWTNNDHKEGLFRSTEATITKL 843 Query: 1368 SGDSVTLSDGQQ----TREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNR 1423 GD +T++ + I Q++ ++ DLAYAI A AQGA+ T IAL E Sbjct: 844 DGDVMTVNHKVDGVDVEKSIDLTQDKMGEYFDLAYAINADQAQGATATNVIALMTAEI-- 901 Query: 1424 KLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQ-KGTAHDVFEPKPDREVMNAE 1482 + +A +AYV ++R K ++ +YTD+R + + K ++ ++ P Sbjct: 902 RALASRANAYVMMTREKDNLWIYTDDRDRLEKTLEASQPEKTSSVELMNGGP-------- 953 Query: 1483 RLFSTARELRDVAAGRAVLRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIW 1542 R + + D+ I K +P +GK+ Sbjct: 954 -------------LDRTAAEELRQSLDDAKLEEIDRSLKELEPTPPPTPNPGDGKTPEDR 1000 Query: 1543 LNPLTTDDGNGLRGFSGEGRVKGSGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDSG 1602 D + + +R + D I ++P Sbjct: 1001 ELTQPRDQREVASSDRPAPADEPRAPERGDTTAPAREPAASPDPTPTDAFDIGHNDPFIK 1060 Query: 1603 VVVR 1606 V+R Sbjct: 1061 EVLR 1064 >UniRef50_B6ASB0 Conjugal transfer protein, TraA n=6 Tax=Leptospirillum RepID=B6ASB0_9BACT Length = 976 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 168/888 (18%), Positives = 332/888 (37%), Gaps = 125/888 (14%) Query: 1 MMSIA-----QVRSAGSAGNYYTDK----------DNYYVLGS--MGERWAGRGAEQLGL 43 M+SI + +Y + ++YY GS RW G A +LGL Sbjct: 1 MLSITVKKGQTAKDLAGVADYPDENRNKEKQVGAVEDYYSQGSEATPSRWLGGAAAELGL 60 Query: 44 QGSVDKDVFTRLLEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDK--- 100 G+V++D L+G P + + G +R R +DLTFSAPKSVS+ +G ++ Sbjct: 61 SGAVNRDHLLATLQGFDPRTGEALVQKAGVDR-RYAFDLTFSAPKSVSIAWAVGTEEVKR 119 Query: 101 RLIDAHNQAVDFAVRQVEALASTRVMTDGQSETVLTG--NLVMALFNHDTSRDQEPQLHT 158 + DA ++AV+ + +E + + T+ L+ A++ H +SR+ +PQ+H+ Sbjct: 120 GIEDAQDRAVERTLAFIEEKFALARRGSSKEGTITKEHVKLLSAVYRHGSSRELDPQIHS 179 Query: 159 HAVVANV-TQHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEA-LGYETE 216 HA++ N+ + +G W L+ ++ ++A G +YR +L ++ LG+ E Sbjct: 180 HAMLQNMGLRADGTWGALNEK---------ELFEWKLALGAVYRAELSSEISKNLGFGIE 230 Query: 217 VVGKHGMWEMPGVP---VEAFSGRSQTIREAVGEDA--SLKSRDVAALDTRKSKQHVDPE 271 + +PG+P E FS R I +A+ E K+ +VAALDTRK K+ V+ E Sbjct: 231 AD--REYFRLPGIPKELEEEFSKRRVQIEKALKEKGLSGGKAAEVAALDTRKGKEVVEAE 288 Query: 272 IKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERK 331 I EW + E G + + R R S D P++ + L+ + Sbjct: 289 ILSEEWKKIAGEYGITAESLQGL---RGMERESNHDSFSLDRPEL-------LRKLTTME 338 Query: 332 VQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKG--LFTSGIHVLDE 389 F D+ ++ +A + + +++ L + G +T+ + E Sbjct: 339 AVFQEKDLFRVAGVACSQNGRGLDDVKAEVAACLKDPEIVKLRGKDGEIYYTTQEMLALE 398 Query: 390 LSVRALSRDIMKQNRVTVHPE------------KSVPRTAGYSDAVSVLAQDRPSLAIVS 437 +++++R + R V PE K + +A+ L + I+ Sbjct: 399 QEIQSMARAGKEDARHVVFPEATKAGIARYEFEKGFKLSDEQHNAIEHLTTQAGRIRILE 458 Query: 438 GQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGM 497 G G AG+ + + G EV + + +++D + + + + L+G Sbjct: 459 GHAG-AGKSTALVPVRYALEASGFEVIGASLQGKKAAGLQKDTGIRSQTLASLLRELQGY 517 Query: 498 A------------FTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRT---G 542 + + V+VD+ + L+ + ++++ + Sbjct: 518 EREDGEKVPPTRILSEKTVVVVDEAAMNDTRLMAGLIRETEKAGAKLILVGDESQVPPVA 577 Query: 543 TGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVS 602 G+ +K + ++ + + R +R ++ ++A S+A Sbjct: 578 AGNPFKTLKKE-LGYAELTENRRQRSDWQKDASREIRSGQVKEGLQKYLEANMISIA--- 633 Query: 603 GVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSR-SRYLRDMYRPGMVMEQWNP 661 +++ + T+ A S ++ S ++ L YR V E + Sbjct: 634 --QDRDEAIK----------------KTVEAWSDHFVTSEPTKTLLTAYRREDVRELNDR 675 Query: 662 ETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVT 721 + +T T+RD +G + K GERL Sbjct: 676 ARAEMKTFG--SLTGPRVETTVRDREGNS----------------EGKREFQAGERLYFK 717 Query: 722 GKIPGLRVSGGDRLQVASVS--EDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPG 779 L V G+ +A++ D V + P +++ G+ T Sbjct: 718 KNDRKLGVMNGETGTLANIDVTSDGKDCVFTV-KMDNGKEIRFDPRDYAQIDYGYAVTIH 776 Query: 780 HSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKL 827 S ++ +++ NA L R ++ + D+ + Sbjct: 777 KSQGETVDFSSNLVTGMGLNALYVQLTRHRDGTQIVLTEDQIDKMAQN 824 Score = 202 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 92/532 (17%), Positives = 183/532 (34%), Gaps = 67/532 (12%) Query: 879 KLAFSMVDLLTEA-KSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASY 937 + F DL A + + G G ++ E+ A +K +++ + G ++ Sbjct: 338 EAVFQEKDLFRVAGVACSQNGRGLDDVKAEVAACLKDPEIVKLRGKDG--EIYYTTQEML 395 Query: 938 EAEKSILRHILEGKE---------AVMPLMERVPGELMEKLTSGQRAATRMILETSDRFT 988 E+ I GKE A + R E KL+ Q A + + R Sbjct: 396 ALEQEIQSMARAGKEDARHVVFPEATKAGIARYEFEKGFKLSDEQHNAIEHLTTQAGRIR 455 Query: 989 VVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHR-AVGEMRSAGVDAQTLASFL 1047 +++G+AG GK+T V A+ E+ V+G + A G + G+ +QTLAS L Sbjct: 456 ILEGHAGAGKSTALVPVRYAL----EASGFEVIGASLQGKKAAGLQKDTGIRSQTLASLL 511 Query: 1048 HDTQLQQRSGETPDFS------NTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTD 1101 + Q +R T+ ++DE++M MA G + + GD Sbjct: 512 RELQGYEREDGEKVPPTRILSEKTVVVVDEAAMNDTRLMAGLIRETEKAGAKLILVGDES 571 Query: 1102 QLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELRE-AVYSLINRDVERALSGLESVKP 1160 Q+ +A G PF+ + A + E RQ + ++ A + + V+ L Sbjct: 572 QVPPVAAGNPFKTLKKELG--YAELTENRRQRSDWQKDASREIRSGQVKEGLQKY----- 624 Query: 1161 SQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRT 1220 + + + + EA + Sbjct: 625 -----------------------------LEANMISIAQDRDEAIKKTVEAWSDHFVTSE 655 Query: 1221 PEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTW 1280 P +TL+ + ED R LN + G L +V V + +G+ + Sbjct: 656 PT---KTLLTAYRREDVRELNDRARAEMKTFGSLTGPRVETTVRDREGNSEGKR----EF 708 Query: 1281 ETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVG 1340 + ++ + ++G + + + + + D ++ Sbjct: 709 QAGERLYFKKNDRKLGVMNGETGTLANIDVTSDGKDCVFTVKMDNGKEIRFDPRDYAQID 768 Query: 1341 TGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQ 1392 G + KS E ++++ T ++ V L+ + +I ++Q ++ Sbjct: 769 YGYAVTIHKSQGETVDFSSNLVTGMGLNALYVQLTRHRDGTQIVLTEDQIDK 820 Score = 89.3 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 52/359 (14%), Positives = 110/359 (30%), Gaps = 28/359 (7%) Query: 1152 LSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEA 1211 L G E +VP V + + + +L + K A + + Sbjct: 514 LQGYEREDGEKVPPTRILSEKTVVVVDEAAMNDTRLMAGLIRETEKAGAKLILVGDESQV 573 Query: 1212 --IVRDYTGRTPEAREQTLIVTHLNEDR----RVLNSMIHDVREKAGELGKEQVMVPVLN 1265 + +T + +T R + + I + K G L K + Sbjct: 574 PPVAAGNPFKTLKKELGYAELTENRRQRSDWQKDASREIRSGQVKEG-LQKYLEANMISI 632 Query: 1266 TANIRDGELRRLSTWETHRDALVLVDNVY--HRIAGISKDDGLITLQDAEGNTRLISPRE 1323 + + + + W H + +R + + + + + E Sbjct: 633 AQDRDEAIKKTVEAWSDHFVTSEPTKTLLTAYRREDVRELNDRARAEMKTFGSLTGPRVE 692 Query: 1324 AVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVS----GDSVTLSDGQQ 1379 + G+R+ F K+DR+ G + T+ + G + Sbjct: 693 TTVRDREGNSEGKREFQAGERLYFKKNDRKLGVMNGETGTLANIDVTSDGKDCVFTVKMD 752 Query: 1380 TREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRM 1439 + + ID YA+T H +QG + F N G + YV L+R Sbjct: 753 NGKEIRFDPRDYAQIDYGYAVTIHKSQGETVDF-------SSNLVTGMGLNALYVQLTRH 805 Query: 1440 KQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGR 1498 + Q+ T+ + + + + ++ DR + E+L + ++L + Sbjct: 806 RDGTQIV------LTEDQIDKMAQNSGVEL--EPTDRMIDFTEQLLAKQQKLAPLLPED 856 >UniRef50_D0KZB2 Conjugative relaxase domain protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KZB2_HALNC Length = 943 Score = 421 bits (1082), Expect = e-115, Method: Composition-based stats. Identities = 169/967 (17%), Positives = 309/967 (31%), Gaps = 117/967 (12%) Query: 1 MMSIAQVRS--------AGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVF 52 M+ I ++ A + N+ K YY W G A LGL GSV Sbjct: 1 MLRIKNLKGDPSAIIDYAENKKNHPDQKSGYYDAKGAPSAWGGALAADLGLSGSVQAADL 60 Query: 53 TRLLEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDF 112 +LL G L DG R R G D++FSAPKSVS+ A++GGD+R+I AH+ AV Sbjct: 61 KKLLSGELSDGT---RFAKEDPDRRLGIDMSFSAPKSVSLAALVGGDERIIQAHDAAVRT 117 Query: 113 AVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRD----QEPQLHTHAVVANVTQH 168 A+ +E +T V +G LV A + H+ +R +PQLHTH +V+N+T Sbjct: 118 AMSMIEQEYATARFGHAGRNVVCSGKLVYAAYRHEDARTVDDIADPQLHTHCIVSNITID 177 Query: 169 NGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKH-GMWEMP 227 K S D I G +YR +L +++ +GYE + + ++ Sbjct: 178 PETGKPRSIDFAWGQDGI-------KLAGAMYRAELARRLKEMGYELRKSEEGFELAQIS 230 Query: 228 GVPVEAFSGRSQTIREAVG------EDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTL 281 VE FS R + +A+ E AS + + L TR+ K + E + EW Q Sbjct: 231 DEQVETFSRRRVQVDQALEQQGTDREHASSELKTAVTLATRQGKAQLSAEDQYEEWQQRA 290 Query: 282 KETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLA 341 E D+ Q R P + LSER V Sbjct: 291 AEAELDLS-------QPVGPRVSVTPPEID--------LDHTFEHLSERASVINKDAVRL 335 Query: 342 RTVGILPPENGVIERARAGIDEAISREQLIPL-DREKGLFTSGIHVLDELSVRALSRDIM 400 + E + I A + + D K + + E + L++ Sbjct: 336 DALINHMSEGATLSTVDKAIQGAAVTGDVFEIEDGIKRKIITRETLKREQQILLLAQQGR 395 Query: 401 KQNRVT------------VHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRER 448 N V + + G A+++ A ++ + G G AG+ Sbjct: 396 GVNSVLIGVGDTKHLIEDAEQAQGFRFSEGQRRAINLTATTTDQVSGIVGAAG-AGKTTA 454 Query: 449 VAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGSTVIVD 508 + + +A+ QG V IA + +K + E +I+D Sbjct: 455 MKTVADLAKSQGLTVVGIAPSSAAADELKSAGADDTMTLATFNLKGEAAGPR---LLILD 511 Query: 509 QGEKLSLKETLTLLDGAARHNVQVLITDSGQR--TGTGSALMAMKDAGVNTYRWQGGEQR 566 + +S ++ LL + + + + D Q GS + +G Y R Sbjct: 512 EAGMVSARDGEALLKKLGKEDRLIFVGDPKQLAAVEAGSPFAQLMRSGAIQYAEITEINR 571 Query: 567 P----------------------------------------ATIISEPDRNVRYARL--- 583 I + R + Sbjct: 572 QKDQKLLDIAQHFAKGKAEEAVALATKYVTEVPVTLPDKPEHKITRQAKTEARRLAIASA 631 Query: 584 -AGDFAASVKAGEESVAQVS-GVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDS 641 A + + + +S + + + +R L +G + T++ L + Sbjct: 632 TAKRYLELSQEERATTLVLSGTNAVRKQVNEQVRKGLIDKGEINGESFTVSTLDKADMTR 691 Query: 642 RSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLD-S 700 Y+PG V+ + ++ + V + + ++ + G + + S D Sbjct: 692 AKMRKAGNYKPGQVI---KTAGKQAEQSEVVAVNLDQNLIQVKLSDGTLKSIDASRFDVK 748 Query: 701 SWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPV 760 +F P ++ +A G+++ T + + + + G + + Sbjct: 749 KTQVFNPRQIDIAAGDKIIFTNNDQATETKNNQIGLIEEIKDGKAIINSNGAK----VEI 804 Query: 761 SDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNA-TLNGLARSGRDVRLYSSLD 819 + + + + A R + + + Sbjct: 805 DIQRKLHIDHAYCITIHRSQGQTVDSVIVAGEASRTTTAEAAYVACTRERYKLEIITDNT 864 Query: 820 ETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKK 879 E + + T + L+ + L ++ + + Sbjct: 865 ERLSKNWVRYADRQTAAEALKSSEEKYPHLDEIREELRRELQQELERQEPTNITPELEIE 924 Query: 880 LAFSMVD 886 + SM D Sbjct: 925 MERSMFD 931 Score = 306 bits (782), Expect = 7e-81, Method: Composition-based stats. Identities = 145/777 (18%), Positives = 272/777 (35%), Gaps = 65/777 (8%) Query: 741 SEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNA 800 ++ + + E G+ + A + + Sbjct: 182 KPRSIDFAWGQDGIKLAGAMYRAELARRLKEMGYELRKSEEGFELAQISDEQVETFSRRR 241 Query: 801 TLNGLARSGRDVRLYSSLDETRTA-----EKLARHPSFTVVSEQIKTRAGETSLETAISH 855 A + + E +TA + S E+ + RA E L+ + Sbjct: 242 VQVDQALEQQGTDREHASSELKTAVTLATRQGKAQLSAEDQYEEWQQRAAEAELDLSQPV 301 Query: 856 QKSALHTPAQQAIHLALPVVESKKLAFSMVDL-LTEAKSFAAEGTGFTELGGEINAQIKR 914 TP + + + + + + L + +EG + + I Sbjct: 302 GPRVSVTPPEIDLDHTFEHLSERASVINKDAVRLDALINHMSEGATLSTVDKAIQGAAVT 361 Query: 915 GDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKE---------AVMPLMERVPGEL 965 GD+ ++ +++R + + E+ IL +G+ L+E Sbjct: 362 GDVFEIEDGI---KRKIITRETLKREQQILLLAQQGRGVNSVLIGVGDTKHLIEDAEQAQ 418 Query: 966 MEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGP 1025 + + GQR A + T+D+ + + G AG GKTT + V L +S+ VVG+ P Sbjct: 419 GFRFSEGQRRAINLTATTTDQVSGIVGAAGAGKTTAMKTVAD----LAKSQGLTVVGIAP 474 Query: 1026 THRAVGEMRSAGVD-AQTLASF-LHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARA 1083 + A E++SAG D TLA+F L R L +LDE+ MV D Sbjct: 475 SSAAADELKSAGADDTMTLATFNLKGEAAGPR----------LLILDEAGMVSARDGEAL 524 Query: 1084 YALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPE-LREAVYS 1142 + R + GD QL A+ G PF A A + EI RQ + L + Sbjct: 525 LKKLGKED-RLIFVGDPKQLAAVEAGSPFAQLMRSGAIQYAEITEINRQKDQKLLDIAQH 583 Query: 1143 LINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFP 1202 E A+ T++ L + + + + Sbjct: 584 FAKGKAEEAV---------------------ALATKYVTEVPVTLPDKPEHKITRQAKTE 622 Query: 1203 DVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVP 1262 + + A + Y + E R TL+++ N R+ +N + GE+ E V Sbjct: 623 ARRLAIASATAKRYLELSQEERATTLVLSGTNAVRKQVNEQVRKGLIDKGEINGESFTVS 682 Query: 1263 VLNTANIRDGELRRLSTWETHRDALVLVDNVYHRI-AGISKDDGLITLQDAEGNTRLISP 1321 L+ A++ ++R+ ++ + ++ D LI ++ ++G + I Sbjct: 683 TLDKADMTRAKMRKAGNYKPGQVIKTAGKQAEQSEVVAVNLDQNLIQVKLSDGTLKSIDA 742 Query: 1322 REAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTR 1381 + ++ P I + GD++ FT +D+ N + + + ++ Sbjct: 743 SRFDVKKTQVFNPRQIDIAAGDKIIFTNNDQATETKNNQIGLIEEIKDGKAIINSNGAKV 802 Query: 1382 EIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQ 1441 EI ++ HID AY IT H +QG + I G E+AYVA +R + Sbjct: 803 EIDIQRKL---HIDHAYCITIHRSQGQTVDSVIVA----GEASRTTTAEAAYVACTRERY 855 Query: 1442 HVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGR 1498 +++ TDN + + + TA + + ++ E REL+ + Sbjct: 856 KLEIITDNTERLSKNWVRYADRQTAAEALKSSEEKYPHLDEIREELRRELQQELERQ 912 >UniRef50_A3ZVN0 Putative uncharacterized protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZVN0_9PLAN Length = 967 Score = 421 bits (1081), Expect = e-115, Method: Composition-based stats. Identities = 180/965 (18%), Positives = 325/965 (33%), Gaps = 115/965 (11%) Query: 1 MMSIAQVRSAGSAGNYYTD---KDNYYVLGSMGERWAGRGAEQLGLQG--SVDKDVFTRL 55 M+ Q +S Y+ + +YY+ + W GRGAE LGL V K+ F L Sbjct: 1 MLIATQGKSVSGTQQYFDQVLTRGDYYLGQEVAGHWHGRGAEVLGLGAGSQVKKEEFNAL 60 Query: 56 LEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVR 115 LEG+ P ++ +R RPG DLTFS PKSVS+ + D+R+++ AV +R Sbjct: 61 LEGKHPTTGKRLTQRNRKDR-RPGMDLTFSVPKSVSLAWAINEDERILEMLQAAVQETMR 119 Query: 116 -QVEALASTRVMTDGQS---ETVLTGNLVMALFNHDTSR----DQEPQLHTHAVVANVTQ 167 VE L RV T + + TG L+ A F H TSR +P LH HA V N T+ Sbjct: 120 RDVEPLMQRRVRTGRHAFTQQKEATGKLIYADFLHKTSRPVEGAADPHLHIHAFVVNWTE 179 Query: 168 HNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVE-ALGYETEVV------GK 220 +G+ G E + + + + +L +++ LGYE E V Sbjct: 180 QDGK---------HFAGEFEEIVRQRPSLQAKFEARLARKMQHELGYEVEHVHYAQGGKL 230 Query: 221 HGMWEMPGV---PVEAFSGRSQTIREAVGEDASLKSRDVAALD--TRKSKQH-VDPEIKM 274 WE+ GV +E FS R+ + + E A + L TR+ K + Sbjct: 231 KWGWELRGVERATIEKFSRRTTQVEQYAEEHAIHDAERKGKLGKLTREKKDTGQSIDQLR 290 Query: 275 AEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQF 334 ++W L + A L+T + + +V A+ R+ Sbjct: 291 SQWRARLTP--------EERAAFAGLLQTTERADGKSEQAAARNSVQYALEHHLYRQSTV 342 Query: 335 TYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLF-TSGIHVLDELSVR 393 V+ + E A ID ++ + D K F T+ + E + Sbjct: 343 ERHQVVGAALEHGLT--LSPEAVEAEIDRMDLIQRTLDADGTKRQFITTKEVLNAEREMI 400 Query: 394 ALSRDIMKQNRVTVHPEKSVP---RTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVA 450 A +RD + E DAV + + R ++ V+G G G+ + Sbjct: 401 AYARDGRGTRKSISSTEHEFQREWLNEQQRDAVCFVLESRDAVLAVAGGAG-TGKSSLME 459 Query: 451 ELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGSTVIVDQG 510 E V ++ G+EV A ++ +++ + + + + + +D+ Sbjct: 460 EAVDAIQQNGKEVFTFAPSTGAREVLEEKGFRKAQTVEHLLRNSKLHPELKDQVIWIDEA 519 Query: 511 EKLSLKETLTLLDGAARHNVQVLITDSGQRTGT---GSALMAMKDAGVNTYRWQGGEQRP 567 L ++ + A N +V+++ ++ + G A+ ++ QR Sbjct: 520 GLLDVRSMNGVFRIAKEQNARVVLSGDTRQHASPRRGEAMRLLEQEAGLNVARVEAIQRQ 579 Query: 568 ATIISEPDR------------------------------------NVRYARLAGDFAASV 591 + RY LA ++ S Sbjct: 580 QGRYRQAVEMISRGQEVVDARTGKTGLLAGFDLLDAMGKIKEVATADRYQLLADNYLKSE 639 Query: 592 KAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMY- 650 G+ ++ RE A +T IR LK G L E + L + Y Sbjct: 640 ANGKSTLVVAPTHREAAAVTSEIRDRLKQDGKLATEERAFVQYRSLNLSEAEKGDAKTYS 699 Query: 651 -RPGMVMEQWNP---ETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFR 706 + +V++ + +RY + + + + L G + + ++ Sbjct: 700 EQTDLVVQFHQNVKGGFQRGERYRVTGLN--NGEVQLVPLSGGEMKKLPQAASDRFEVYA 757 Query: 707 PEKMPVADGERLRV----TGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSD 762 ++ VA G++LR T K R+S G +V V+ G D Sbjct: 758 ERELRVAAGDKLRFSLGGTTKNGKGRISNGRLDEVKGFDASGNIVLKNGWTI-------D 810 Query: 763 SPFTALKLENGWVETPGHSVSDSATVFASVT---QMAMDNATLNGLARSGRDVRLYSSLD 819 S + L L + A + ++R DV +Y Sbjct: 811 SSYAHLDLGYVVTSHASQGKDRHVAIAAMGSESLPAINAKQFYVTVSRGREDVAIYVDDK 870 Query: 820 ETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAI----HLALPVV 875 + + + + + + ++ + + + Sbjct: 871 ARVRKAIERSGEQLSATQMLSRAASETMATTSRQAERQHKQTIERRSLLGSFRDRVVRWW 930 Query: 876 ESKKL 880 ++ Sbjct: 931 RERQA 935 Score = 268 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 118/658 (17%), Positives = 233/658 (35%), Gaps = 72/658 (10%) Query: 863 PAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVD- 921 A+ ++ AL ++ ++ A + + A+I R DL+ Sbjct: 323 AARNSVQYALEHHLYRQSTVERHQVVGAALEHGLTLSP-----EAVEAEIDRMDLIQRTL 377 Query: 922 VAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMIL 981 A G + ++ AE+ ++ + +G+ + E L QR A +L Sbjct: 378 DADGTKRQFITTKEVLNAEREMIAYARDGRGTRKSISSTEHEFQREWLNEQQRDAVCFVL 437 Query: 982 ETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGV-DA 1040 E+ D V G AG GK++ + A+ V P+ A + G A Sbjct: 438 ESRDAVLAVAGGAGTGKSSLMEEAVDAIQQ----NGKEVFTFAPSTGAREVLEEKGFRKA 493 Query: 1041 QTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDT 1100 QT+ L +++L P+ + + +DE+ ++ M + + R V SGDT Sbjct: 494 QTVEHLLRNSKL------HPELKDQVIWIDEAGLLDVRSMNGVFRIAKEQNARVVLSGDT 547 Query: 1101 DQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKP 1160 Q + G+ RL + + +VA ++ I RQ R+AV + Sbjct: 548 RQHASPRRGEAMRLLEQEAGLNVARVEAIQRQQGRYRQAVEMISRGQE------------ 595 Query: 1161 SQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRT 1220 + + + L G+ Y+ + +Y ++ Sbjct: 596 ----------------VVDARTGKTGLLAGFDLLDAMGKIKEVATADRYQLLADNYL-KS 638 Query: 1221 PEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTW 1280 + TL+V + + + S I D ++ G+L E+ + N+ + E T+ Sbjct: 639 EANGKSTLVVAPTHREAAAVTSEIRDRLKQDGKLATEERAFVQYRSLNLSEAEKGDAKTY 698 Query: 1281 ETHRDALV---------LVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTL 1331 D +V +R+ G++ + + + +A ++ + Sbjct: 699 SEQTDLVVQFHQNVKGGFQRGERYRVTGLNNGEVQLVPLSGG---EMKKLPQAASDRFEV 755 Query: 1332 YTPDTIRVGTGDRMRF----TKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQ 1387 Y +RV GD++RF T + + + V + T Sbjct: 756 YAERELRVAAGDKLRFSLGGTTKNGKGRISNGRLDEVKGFDASGNIVLKNGWTI------ 809 Query: 1388 EQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYT 1447 + + H+DL Y +T+H +QG AIA G+E + YV +SR ++ V +Y Sbjct: 810 DSSYAHLDLGYVVTSHASQGKDRHVAIAAMGSESLPA--INAKQFYVTVSRGREDVAIYV 867 Query: 1448 DNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAG 1505 D++ AI + ++ +A + A R+ + R++L Sbjct: 868 DDKARVRKAIERSGEQLSATQML--SRAASETMATTSRQAERQHKQTIERRSLLGSFR 923 >UniRef50_A3VN00 TrwC protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VN00_9PROT Length = 994 Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats. Identities = 202/936 (21%), Positives = 345/936 (36%), Gaps = 129/936 (13%) Query: 20 KDNYYVLGS---MGERWAGRGAEQLGLQGSVDKDVFTRLLEGRLPDGADLSRMQDGSNR- 75 KDNYY G W G+GA LGL+G V+ + F R+L G DG + + + + Sbjct: 20 KDNYYAKGGDAPEPSSWFGKGAASLGLKGGVETETFERVLNGETLDGRRVGQREGETAEQ 79 Query: 76 -----HRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEAL-ASTRVMTD- 128 HRPG DLTFS PK VS++ +GGDKR++ AH AVD ++ E A TR+ T Sbjct: 80 AQARAHRPGIDLTFSPPKDVSLLLYIGGDKRILGAHRAAVDQTLKWAERNLAGTRIRTGP 139 Query: 129 GQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ-HNGEWKTLSSDKVGKTGFIE 187 + V TGNLV+A F HD SRD++PQLHTHAV+AN+T+ +G W+ L +D Sbjct: 140 SATPAVKTGNLVIARFEHDISRDKDPQLHTHAVIANITKTDDGRWRALHNDPF------- 192 Query: 188 NVYANQIAFGRLYREKLKEQVEALGYETE-VVGKHGMWEMPGVP---VEAFSGRSQTIRE 243 +A++ Y L+ + LGY + GK G + + GVP FS I Sbjct: 193 --FAHRKTLSLAYDATLRNALRELGYRVKLEDGKSGRYSVDGVPDGARAEFSKGKDRIDS 250 Query: 244 AV--GEDASLKSRDVAALDTRKSKQHVDPEIKMA-------EWMQ----------TLKET 284 A + + +RD A+ TR +K + E ++A W + Sbjct: 251 AAVGLKHPTPSARDKLAVKTRPAKDELRQEERVALRETRGAPWKATLEHTVAVSVERQAQ 310 Query: 285 GFDIRAYRDAADQRADLRTLTPG------------------------PASQDGPDVQQAV 320 G R D A R + L AS+ G + AV Sbjct: 311 GHLQRPLDDRAVGRVGMEGLARRMAQNLFRPTKTLRLSENDPYKLERAASEKGYSARAAV 370 Query: 321 TQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLF 380 + + ER+ F+ V + + + R +R+ L+ Sbjct: 371 SFGLRHHEEREAAFSLHHVRRTALEHAADGVTLRDIDRELRFLRANRKLLVNAKDPNAES 430 Query: 381 TSGIHVLDELSVRALSRDIMKQNRVTVH-----PEKSVPRTAGYSDAVSVLAQDRPSLAI 435 T+ + E +L +D + + +S T G A+ ++ L Sbjct: 431 TTKRSLTHEERTLSLLQDAGRTGPLVPEQTLRSALESTHLTGGQKAAIGLILGGPNRLVG 490 Query: 436 VSGQGGAAGQRERVAELVMMARE-------QGREVQIIAADRRSQMNMKQDERLSGELIT 488 V G G G+ + + +AR+ G +V +A ++ +++ ++ Sbjct: 491 VQGYAG-TGKTTMMRQTAALARDLAPLAKKDGYKVLGLAPTHSARKTLEESGGFDSRTVS 549 Query: 489 GRRQLLEGMAFTP---GSTVIVDQGEKLSLKETLTLLDGAARHN-VQVLITDSGQRTGT- 543 + G P + V++D+ LS + LL+ +++++ ++ G Sbjct: 550 AFLREAGGGTLPPDIKNTIVLIDEASFLSTRNMNALLERLIALKPAKIVLSGDRRQHGAV 609 Query: 544 --GSALMAMKDAGVNTYRWQGGEQ---------------------------RPATIISEP 574 G + AG+ T + + R I E Sbjct: 610 EAGRPFDIAQRAGLPTAIMKDIVRLPKDEGHRDQRAAVEAAAQGKVAVAMKRLGANIVER 669 Query: 575 DRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTAL 634 N+ + A ++++ R + + Q IRSEL G L +T++ L Sbjct: 670 PGNLAGGAVEAWRALPKDKQDKALLVAPSHRLREAINQGIRSELIANGRLSAETMTISVL 729 Query: 635 SPVWLDSRSRYLRDMYRPGMVMEQWNP----ETRSHDRYVIDRVTAQSHSLTLRDAQGET 690 L Y G +++ + + R ++ V + LTLR+A+G+ Sbjct: 730 RSKNLTRAEAMSPRSYAAGDILQFHARLDAINAKKNTRRLVTAVDEERGRLTLRNARGKD 789 Query: 691 QVVRISSLDSSWS-----LFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAM 745 Q V +S L + L R E + + G+ + T P +S D +V ++ + Sbjct: 790 QTVPLSRLQGRYENTPYSLHREEPLELRRGDSVMFTRSNPDAGLSAMDAAKVVGWDQERV 849 Query: 746 TVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVT---QMAMDNATL 802 ++ V G D +L + V + + Sbjct: 850 SLNVSGTQRQFGR--DDPALRSLTHGYAMTSHAAQGRTAKDVVAVMDSKERALTSQVGFY 907 Query: 803 NGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSE 838 ++RS + L + E + T E Sbjct: 908 VSISRSADTLALIVNDKERVLNTMQRQTGLKTSAME 943 Score = 272 bits (695), Expect = 8e-71, Method: Composition-based stats. Identities = 144/691 (20%), Positives = 257/691 (37%), Gaps = 80/691 (11%) Query: 813 RLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTP---AQQAIH 869 L LD+ + + + E + A A+ A+ Sbjct: 312 HLQRPLDDRAVGRVGMEGLARRMAQNLFRPTKTLRLSENDPYKLERAASEKGYSARAAVS 371 Query: 870 LALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTG 929 L E ++ AFS+ + A AA+G ++ E+ LL + Sbjct: 372 FGLRHHEEREAAFSLHHVRRTALEHAADGVTLRDIDRELRFLRANRKLLVNAKDPNAES- 430 Query: 930 LLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELME--KLTSGQRAATRMILETSDRF 987 ++ S E+ L + + + E+ +E LT GQ+AA +IL +R Sbjct: 431 --TTKRSLTHEERTLSLLQDAGRTGPLVPEQTLRSALESTHLTGGQKAAIGLILGGPNRL 488 Query: 988 TVVQGYAGVGKTTQFRAVMSAVNM---LPESERPRVVGLGPTHRAVGEMRSA-GVDAQTL 1043 VQGYAG GKTT R + L + + +V+GL PTH A + + G D++T+ Sbjct: 489 VGVQGYAGTGKTTMMRQTAALARDLAPLAKKDGYKVLGLAPTHSARKTLEESGGFDSRTV 548 Query: 1044 ASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAY-ALIAAGGGRAVASGDTDQ 1102 ++FL + PD NT+ L+DE+S + +M LIA + V SGD Q Sbjct: 549 SAFLREAGGGTLP---PDIKNTIVLIDEASFLSTRNMNALLERLIALKPAKIVLSGDRRQ 605 Query: 1103 LQAIAPGQPFRLQQTRSAADVAIMKEIVRQTP-----ELREAVYSLINRDVERALSGLES 1157 A+ G+PF R+ AIMK+IVR + R AV + V A+ L Sbjct: 606 HGAVEAGRPF-DIAQRAGLPTAIMKDIVRLPKDEGHRDQRAAVEAAAQGKVAVAMKRL-- 662 Query: 1158 VKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYT 1217 G + P L V + Sbjct: 663 ----------------------------------------GANIVERPGNLAGGAVEAWR 682 Query: 1218 GRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRL 1277 + +++ L+V + R +N I G L E + + VL + N+ E Sbjct: 683 ALPKDKQDKALLVAPSHRLREAINQGIRSELIANGRLSAETMTISVLRSKNLTRAEAMSP 742 Query: 1278 STWETHR--------DALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPR----EAV 1325 ++ DA+ N + + ++ G +TL++A G + + Sbjct: 743 RSYAAGDILQFHARLDAINAKKNTRRLVTAVDEERGRLTLRNARGKDQTVPLSRLQGRYE 802 Query: 1326 AEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRP 1385 +L+ + + + GD + FT+S+ + G A V + V+L+ R+ Sbjct: 803 NTPYSLHREEPLELRRGDSVMFTRSNPDAGLSAMDAAKVVGWDQERVSLNVSGTQRQF-G 861 Query: 1386 GQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQV 1445 + A + + YA+T+H AQG + +A+ + + YV++SR + + Sbjct: 862 RDDPALRSLTHGYAMTSHAAQGRTAKDVVAVMD--SKERALTSQVGFYVSISRSADTLAL 919 Query: 1446 YTDNRQGWTDAINNAVQ-KGTAHDVFEPKPD 1475 ++++ + + K +A + D Sbjct: 920 IVNDKERVLNTMQRQTGLKTSAMETEGRIGD 950 >UniRef50_B6ALF3 Putative mobilization protein TraA n=1 Tax=Leptospirillum sp. Group II '5-way CG' RepID=B6ALF3_9BACT Length = 899 Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats. Identities = 175/947 (18%), Positives = 321/947 (33%), Gaps = 106/947 (11%) Query: 1 MMSIAQVRSAGSAGNYYT--------DKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVF 52 M+SI + SA YY + ++YY RW GRGA+ LGL G V K+ F Sbjct: 1 MLSIVTRGNGTSAQAYYEHLIEGRDREIEDYYAKREK-GRWLGRGADALGLSGPVRKEAF 59 Query: 53 TRLLEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDK---RLIDAHNQA 109 L G P + N HR G+DLTFSAPKSVS++ LG D+ R+ AH++A Sbjct: 60 RDLAFGFDPQTGKPLVQ-NPGNNHRFGWDLTFSAPKSVSLVWALGDDETQKRIAAAHDRA 118 Query: 110 VDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ-H 168 V+ A+ +E AS G E + LV+A + H TSR+Q+PQLH+H V NV Sbjct: 119 VEAALSYMERHASFSRKGHGGQEEIRAD-LVVATYRHYTSREQDPQLHSHGFVFNVAMGE 177 Query: 169 NGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKH-GMWEMP 227 +G+ +TL + + ++A G YR L ++++ GY GK + E+ Sbjct: 178 DGKTRTLEGS---------HFFEWKMAGGAAYRVALAKELQEQGYTVLRDGKSFRLGEID 228 Query: 228 GVPVEAFSGRSQTIREAVGEDA--SLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETG 285 + FS R + I ++ E K+ +VA L TRKSKQ DPE EW + Sbjct: 229 RELEDLFSTRRRQIEASLSERGVRGAKASEVATLTTRKSKQERDPEELRIEWRERAGRFL 288 Query: 286 FDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVG 345 +R G D ++++ L++ + FT T AR + Sbjct: 289 -----ESGIFREREHALGQDLSRIIGHGLDSKKSLELLPESLTQERSTFTETQAHARILQ 343 Query: 346 ILPPENGVIERARAGIDEAISREQLIPL--DREKGLFTSGIHVLDELSVRALSRDIMKQN 403 L + A +D +SR +++PL + + +T E + + D+ K+ Sbjct: 344 ELQ-GAEDLSVAERSVDAILSRPEVVPLVSNPGRDRYTILEMQRLEREMVETALDLGKRL 402 Query: 404 RVTVHPEKSVP------RTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAR 457 V + V + SL V G G G+ + + + Sbjct: 403 NHHVRQKSLEEVLSRSGLPTEQKTMVRSI-THETSLVAVQGWAG-TGKSTALKAALEIWE 460 Query: 458 EQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGM---AFTPGSTVIVDQGEKLS 514 + G V+ A ++ + + + + + + + + T ++VD+ + Sbjct: 461 KNGFRVRGAALSGKAALGLSEGSGIVSKTLAALEREIGEDGILPLTSHDILVVDEAGMVG 520 Query: 515 LKETLTLLDGAARHNVQVLITDSGQRTG---TGSALMAMKDAGVNTYRWQGGEQRPATII 571 + +L ++++ ++ G+A A+ + ++ +R Sbjct: 521 SRTMERILSKVHESGAKLVLVGDVRQLPAIEAGAAFRAILERVGSS--ELSHIRRQTLEE 578 Query: 572 SEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTM 631 A ++ A + A SG + + +A+ +L +G + + Sbjct: 579 DRQAIRDLALGKAEKALENLSARDRIHAYDSGRLTKDGIGEAVSRDLF-EGKISI----- 632 Query: 632 TALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQ 691 V + + + ++ L D G Sbjct: 633 ----AVSATREEARDINEWA-----------------------RIHAQAMGLSDKNGIQV 665 Query: 692 VVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPG 751 + ++ G+R+ T L V GD V + + + + Sbjct: 666 ------------ATVHGERELSRGDRILCTRNNRRLEVMNGDFGTVREIRNGHLRIELDR 713 Query: 752 RAEPATLPVSDSPFTALKLENGWVETPGHSVSDSA---TVFASVTQMAMDNATLNGLARS 808 P L+ G+ T + ++A M+ +R+ Sbjct: 714 GG-----FREVDPLVYSHLDYGYAATCHKLQGATVERCHIYAPENGMSGREWAYVAASRA 768 Query: 809 GRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAI 868 ++ R + + + A+ + Sbjct: 769 RESFYIHVERLTLRELAPAWSASRAKDTTLDYEGDKRHERGLQEDLRTSRRTLSTAEDFV 828 Query: 869 HLALPV--VESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIK 913 K+ L + + E I+ Sbjct: 829 RRLDETLGHPGKRCGIRRTLSLRYLERAHQKDRSLDRDRAEKELVIE 875 Score = 176 bits (445), Expect = 8e-42, Method: Composition-based stats. Identities = 77/427 (18%), Positives = 148/427 (34%), Gaps = 26/427 (6%) Query: 863 PAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDV 922 +++++ L + ++ F+ + ++A + R +++ + Sbjct: 313 DSKKSLELLPESLTQERSTFTETQAHARILQELQGAEDLSVAERSVDAILSRPEVV--PL 370 Query: 923 AKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEK---LTSGQRAATRM 979 G E+ ++ L+ + + + + E + L + Q+ R Sbjct: 371 VSNPGRDRYTILEMQRLEREMVETALDLGKRLNHHVRQKSLEEVLSRSGLPTEQKTMVRS 430 Query: 980 ILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRS-AGV 1038 I VQG+AG GK+T +A + + E RV G + +A + +G+ Sbjct: 431 I-THETSLVAVQGWAGTGKSTALKAALE----IWEKNGFRVRGAALSGKAALGLSEGSGI 485 Query: 1039 DAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASG 1098 ++TLA+ + G P S+ + ++DE+ MVG+ M R + + G + V G Sbjct: 486 VSKTLAAL---EREIGEDGILPLTSHDILVVDEAGMVGSRTMERILSKVHESGAKLVLVG 542 Query: 1099 DTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQT-PELREAVYSLINRDVERALSGLES 1157 D QL AI G FR R + + I RQT E R+A+ L E+AL L + Sbjct: 543 DVRQLPAIEAGAAFRAILERVG--SSELSHIRRQTLEEDRQAIRDLALGKAEKALENLSA 600 Query: 1158 VKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYT 1217 E K++ A + + + I Sbjct: 601 RDRIHAYDSGRLTKDGIGEAVSRDLFEGKISIAVSATREEARDINE-----WARIHAQAM 655 Query: 1218 GRTPEAREQTLIVTH----LNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGE 1273 G + + Q V DR + + G+ G + + + G Sbjct: 656 GLSDKNGIQVATVHGERELSRGDRILCTRNNRRLEVMNGDFGTVREIRNGHLRIELDRGG 715 Query: 1274 LRRLSTW 1280 R + Sbjct: 716 FREVDPL 722 Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats. Identities = 41/281 (14%), Positives = 86/281 (30%), Gaps = 20/281 (7%) Query: 1244 IHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHR-----DALVLVDNVYHRIA 1298 I + + + A R+ +++ R + +++ Sbjct: 571 IRRQTLEEDRQAIRDLALGKAEKALENLSARDRIHAYDSGRLTKDGIGEAVSRDLFEGKI 630 Query: 1299 GISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTP---DTIRVGTGDRMRFTKSDRERG 1355 I+ +D R+ + +++ + + GDR+ T+++R Sbjct: 631 SIAVSATREEARDINEWARIHAQAMGLSDKNGIQVATVHGERELSRGDRILCTRNNRRLE 690 Query: 1356 YVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIA 1415 + TV + + + + R H+D YA T H QGA+ Sbjct: 691 VMNGDFGTVREIRNGHLRIELDRGG--FREVDPLVYSHLDYGYAATCHKLQGATVERCHI 748 Query: 1416 LEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDN--RQGWTDAINNAVQKGTAHDVFEPK 1473 M+G E AYVA SR ++ ++ + + A + + K T D Sbjct: 749 YAP----ENGMSGREWAYVAASRARESFYIHVERLTLRELAPAWSASRAKDTTLDY---- 800 Query: 1474 PDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPAR 1514 + R ++ +R+ G R Sbjct: 801 EGDKRHERGLQEDLRTSRRTLSTAEDFVRRLDETLGHPGKR 841 >UniRef50_Q1NH26 Putative uncharacterized protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NH26_9SPHN Length = 981 Score = 419 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 183/927 (19%), Positives = 330/927 (35%), Gaps = 72/927 (7%) Query: 8 RSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRLPDGADLS 67 S G+ YY D Y + W G A +L L G VD + F LL G++ G L Sbjct: 9 GSPGNIARYYAIGDYYTKGEAEHSSWGGSLAGELDLSGDVDPETFRSLLAGKV-AGQQLG 67 Query: 68 RMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEALASTRVMT 127 R + H PG+D SAPKSVSMMA+ GD+R++ H +AVD + +E A R Sbjct: 68 RHRAEGIEHHPGWDFAISAPKSVSMMALAMGDERIVQLHERAVDVTLAYLEEHAQRRKRD 127 Query: 128 DGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDKVGKTGFIE 187 +G+ TG L+ A F SR+ +P LHTH VV N+T + + Sbjct: 128 EGKIVHETTGRLLWARFTEHASRELDPHLHTHVVVLNMT-------SGQEGDPMASLETR 180 Query: 188 NVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP---VEAFSGRSQTIREA 244 +YA Q+ G++YR +L + LGYE + + G++E+ GVP +E S R+Q I E Sbjct: 181 AMYAVQMTSGQIYRNELAHGLRELGYEIDFDPRRGLFEIRGVPKALIEEMSQRAQQINEH 240 Query: 245 VGEDA--SLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLR 302 + +R + TR +K + + + +W L + A R A+Q Sbjct: 241 AQQHGLSGQAARRQSFYATRGAKVKIGIDELLIQWRGRLGPHEKPLEAVRGGAEQVG--- 297 Query: 303 TLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGID 362 D D +A I ++ + + E + R I+ Sbjct: 298 ---EHAVPVDRVDAARAALFGIRQSEGKEAVNALDRLFTTGLASHVGE-VRFQDLRPLIE 353 Query: 363 EAISREQLIPLDREKGL------FTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVP-- 414 R +L+ + G TS V E S+ + R ++ +P Sbjct: 354 AHEERRKLLATRGQTGDEILTRGRTSRRTVRLEQSLAMHLALAVGDGRPVASADRLLPVL 413 Query: 415 ----RTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADR 470 + A+ +A R + + G G AG+ V L A G + +A Sbjct: 414 EQAGLSPEQERALVDMATSRDRVTGLHGVAG-AGKSTLVRSLKDAALP-GTTLIALAPTS 471 Query: 471 RSQMNMKQDERLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNV 530 + + + ++ + G + +++D+ +L ++ L +L+ + Sbjct: 472 AAAAELGEKAQIESRTVASLL-AGGGYGISGNHVLVLDEAGQLGNRQALRVLEISRATGA 530 Query: 531 QVLITDSGQRTGT---GSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYAR----- 582 +V++ ++TG G A M+ G+ T ++ + E + R Sbjct: 531 RVILLGDNKQTGAIEQGKAFWLMQKLGMQTAELTESRRQQTEAMQEAVAHARAENYAASI 590 Query: 583 -------------------LAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGV 623 +A S ++ + V + I+ IR L+ +GV Sbjct: 591 GRLDKVVSGEDAATLAKGVVAEWTRLSPRSRAATNILVLDNASRLIVNSKIREVLQREGV 650 Query: 624 LGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNP----ETRSHDRYVIDRVTAQ-- 677 + E ++ L+P + + L Y G V+ Y + V Sbjct: 651 VAAEETRLSVLTPGGHSGQEKRLARFYSGGQVVTFSRNQTGAGLERDAEYRVVGVVRDAQ 710 Query: 678 -SHSLTLRDAQGETQVVRISSLD-SSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRL 735 + L D QG T + S ++F E+ +++G+R++ L++ +R Sbjct: 711 GRQRVRLVDEQGRTHLWDPRMAKSSQVNVFVDEQRDLSEGDRIQWRLASRELKLKNAERG 770 Query: 736 QVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQM 795 V + T+ T+ +S + + + + Sbjct: 771 TVEKIEGSLATIRWDRGKRVQTVDLSKHKTWDHGYSETVYSAQSKTYDRVYVLAPVGSPL 830 Query: 796 AMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAI-- 853 + R+ V+L++ E + R T E + + A Sbjct: 831 VNGQNFYTAITRARYGVKLWTQDPEKLVEKLELRSGEKTSGLEGLGRLERDHRDRLATRH 890 Query: 854 SHQKSALHTPAQQAIHLALPVVESKKL 880 L ++ L ++L Sbjct: 891 MRHLQQLKEDQERERRLRADRQLERQL 917 Score = 236 bits (602), Expect = 4e-60, Method: Composition-based stats. Identities = 152/850 (17%), Positives = 280/850 (32%), Gaps = 83/850 (9%) Query: 724 IPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVS 783 P + V S + + P L G + +S Sbjct: 172 DPMASLETRAMYAVQMTSGQIYRNELAHGLRELGYEIDFDPRRGLFEIRGVPKALIEEMS 231 Query: 784 DSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTR 843 A Q L+G A + ++L + + Sbjct: 232 QRAQQINEHAQQHG----LSGQAARRQSFYATRGAKVKIGIDELLIQWRGRLGPHEKPLE 287 Query: 844 AGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTE 903 A E H A +A + E K+ ++ L T + F + Sbjct: 288 AVRGGAEQVGEHAVPVDRVDAARAALFGIRQSEGKEAVNALDRLFTTGLASHVGEVRFQD 347 Query: 904 LGGEINAQIKRGDLLYVDVAKGYG--TGLLVSRASYEAEKSILRHILEGKEAVMPLMER- 960 L I A +R LL G T SR + E+S+ H+ P+ Sbjct: 348 LRPLIEAHEERRKLLATRGQTGDEILTRGRTSRRTVRLEQSLAMHLALAVGDGRPVASAD 407 Query: 961 --VPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERP 1018 +P L+ Q A + + DR T + G AG GK+T R++ A Sbjct: 408 RLLPVLEQAGLSPEQERALVDMATSRDRVTGLHGVAGAGKSTLVRSLKDAAL-----PGT 462 Query: 1019 RVVGLGPTHRAVGEMRS-AGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGN 1077 ++ L PT A E+ A ++++T+AS L N + +LDE+ +GN Sbjct: 463 TLIALAPTSAAAAELGEKAQIESRTVASLLAGGGYG-------ISGNHVLVLDEAGQLGN 515 Query: 1078 TDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVR-QTPEL 1136 R + A G R + GD Q AI G+ F + A + E R QT + Sbjct: 516 RQALRVLEISRATGARVILLGDNKQTGAIEQGKAF-WLMQKLGMQTAELTESRRQQTEAM 574 Query: 1137 REAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAML 1196 +EAV + ++ L+ V Sbjct: 575 QEAVAHARAENYAASIGRLDKVVSG----------------------------------- 599 Query: 1197 KGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGK 1256 + TL + +V ++T +P +R T I+ N R ++NS I +V ++ G + Sbjct: 600 ------EDAATLAKGVVAEWTRLSPRSRAATNILVLDNASRLIVNSKIREVLQREGVVAA 653 Query: 1257 EQVMVPVLNTANIRDGELRRLSTWETHRDALV--------LVDNVYHRIAGISKD---DG 1305 E+ + VL E R + + L + +R+ G+ +D Sbjct: 654 EETRLSVLTPGGHSGQEKRLARFYSGGQVVTFSRNQTGAGLERDAEYRVVGVVRDAQGRQ 713 Query: 1306 LITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVT 1365 + L D +G T L PR A + V ++ + + GDR+++ + RE TV Sbjct: 714 RVRLVDEQGRTHLWDPRMAKSSQVNVFVDEQRDLSEGDRIQWRLASRELKLKNAERGTVE 773 Query: 1366 AVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKL 1425 + G T+ + + ++ + D Y+ T + AQ + L Sbjct: 774 KIEGSLATIR-WDRGKRVQTVDLSKHKTWDHGYSETVYSAQSKTYDRVYVLAPVGS---P 829 Query: 1426 MAGFESAYVALSRMKQHVQVYTDNRQGWTDAIN-NAVQKGTAHDVFE--PKPDREVMNAE 1482 + ++ Y A++R + V+++T + + + + + +K + + + R+ + Sbjct: 830 LVNGQNFYTAITRARYGVKLWTQDPEKLVEKLELRSGEKTSGLEGLGRLERDHRDRLATR 889 Query: 1483 RLFSTARELRDVAAGRAVLRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIW 1542 + + D R + L G A AF+ + + Sbjct: 890 HMRHLQQLKEDQERERRLRADRQLERQLRAQGSRERGVADRLADRAQKAFEALDRHLQSF 949 Query: 1543 LNPLTTDDGN 1552 L ++ + Sbjct: 950 LKGRESERAD 959 >UniRef50_B1ZY28 Conjugative relaxase domain protein n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZY28_OPITP Length = 910 Score = 416 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 190/940 (20%), Positives = 340/940 (36%), Gaps = 100/940 (10%) Query: 1 MMSIAQVRSAGSAGNYYTDK---DNYYVLGSM-GERWAGRGAEQLGLQGSVDKDVFTRLL 56 M+ + +A Y+ D +YY G W G AE+LGL G+V + F L Sbjct: 1 MLRPKPQLNLQNAREYFRDHLRVGDYYSEGQTIAGDWLGLAAERLGLTGAVTEKEFLALC 60 Query: 57 EGRLPDGADLSRMQDGSNRH---------RPGYDLTFSAPKSVSMMAMLGGDKRLIDAHN 107 EG P+ + + R R +D T S PKSVS++A D R++DAH Sbjct: 61 EGLHPETGKRLTARMNTARRVDGKLAANRRIFHDFTISPPKSVSIVARC-QDSRIVDAHR 119 Query: 108 QAVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ 167 AV A+ ++E A TR+ Q+ +TGN+V A F HDTSR +P LHTH VV N T Sbjct: 120 DAVRLAMIELEKFAETRIRKSKQNAERVTGNIVAACFQHDTSRALDPHLHTHCVVFNATF 179 Query: 168 H--NGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWE 225 WK L + +Y Q LY +L +++ +LGY E ++ +E Sbjct: 180 DPVENRWKALQT---------VGMYRAQKFAENLYFHELSKRLRSLGYGIENNARN--FE 228 Query: 226 MPGVP---VEAFSGRSQTIREAVGED-ASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTL 281 + VP +E FS R I A+ D+ AL R + +H D +IK A Sbjct: 229 ISRVPAALIERFSKRHAQIAAEAERYVANGYDGDIGALRRRLAHEHRDRKIKGATAELLR 288 Query: 282 KETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLA 341 + ++ + D A LR + PA D++ V A L + +++A Sbjct: 289 EH--WNRQLSPDEARALTGLRGV---PAITQRADLRSIVGWADEHLFTHRAVVNDYELIA 343 Query: 342 RTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMK 401 + EN ++ R+ +++ + S + EL + ++D K Sbjct: 344 TALARGRGENFDLDALRSAVEQHGYLRE-----DGTRKLISAELLRCELDIVLAAQDGRK 398 Query: 402 QNRVT-VHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQG 460 ++R + S ++ A + R + + G G G+ + E+ + Sbjct: 399 RHRALNPNYHPSPSLSSEQERAARRILTSRDFITLFRGGAG-TGKSHTLKEVALGLAAAE 457 Query: 461 REVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLT 520 R V ++A R+ ++ D L E + G+ VI+D+ ++ ++ Sbjct: 458 RPVVVLAPQRQQVHALETD-GLPAETLARTLAT---GRLDHGAVVILDEAGQVGGRDLHA 513 Query: 521 LLDGAARHNVQVLITDSGQRTGTGSALMAMKD---------AGVNTYRWQGGEQRPAT-- 569 L+ H +++++ ++ G +A A++ A + T R Q + Sbjct: 514 LIRLVQAHGGRLILSGDTRQHGAVAASDALRAIEQHAKPRVAVLRTIRRQNPALARTSEE 573 Query: 570 ------------------------------IISEPDRNVRYARLAGDFAASVKAGEESVA 599 + E VR +AG++ +++ GE V Sbjct: 574 RRFIRRYRAVVKKASEGKQAESFDLLDQLGCVRELPDEVRGVAVAGEYLTAMERGESVVV 633 Query: 600 QVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQW 659 E + A+R+ L + G LG P PV + Y PG Sbjct: 634 VAQTWNEVHAVNDAVRTALHSAGKLG-PGTPTVTYQPVDRSESQKRDPRFYEPGQAAHFL 692 Query: 660 NPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLR 719 R + A + L + V + + + M +A G+RL+ Sbjct: 693 RSYGRFKKGDTCEIAEANDRGVVLVKDGRRSTVGY--RHAERFIVTKRTDMEIAPGDRLQ 750 Query: 720 VTGKIPG---LRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVE 776 + R+ G+ + VA+V +V R TL S Sbjct: 751 LKANGRSVEGTRLHNGELVTVANVDSSGALIVTDERGATKTLTSSQRLLVR---GYAVTS 807 Query: 777 TPGHSVSDSATVFASVTQMAMDN--ATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFT 834 + +FA + A N ++R + V +++ D+ + ++ Sbjct: 808 YGSQGKTVDTVLFADAGERAATNAQQWYVTISRGRKRVVVFTP-DKDQLRTRVESPGERE 866 Query: 835 VVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPV 874 + +E + + + + + + Sbjct: 867 LATEGERLALALRWTQQHRQELWATQRPRQEMHLREGQRM 906 Score = 229 bits (582), Expect = 1e-57, Method: Composition-based stats. Identities = 121/717 (16%), Positives = 233/717 (32%), Gaps = 68/717 (9%) Query: 792 VTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLET 851 Q+A + G L L K+ + + + + + + Sbjct: 244 HAQIAAEAERYVANGYDGDIGALRRRLAHEHRDRKIKGATAELLREHWNRQLSPDEARAL 303 Query: 852 AISHQKSALHTPA--QQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEIN 909 A+ A + + A + + + + +L+ A + +L + Sbjct: 304 TGLRGVPAITQRADLRSIVGWADEHLFTHRAVVNDYELIATALARGRGENF--DLDALRS 361 Query: 910 AQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKL 969 A + G L + GT L+S E I+ +G++ L L Sbjct: 362 AVEQHGYL------REDGTRKLISAELLRCELDIVLAAQDGRKRHRALNPNYHPS--PSL 413 Query: 970 TSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRA 1029 +S Q A R IL + D T+ +G AG GK+ + V + + VV L P + Sbjct: 414 SSEQERAARRILTSRDFITLFRGGAGTGKSHTLKEVALGLA----AAERPVVVLAPQRQQ 469 Query: 1030 VGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAA 1089 V + + G+ A+TLA L + +LDE+ VG D+ L+ A Sbjct: 470 VHALETDGLPAETLARTLATG---------RLDHGAVVILDEAGQVGGRDLHALIRLVQA 520 Query: 1090 GGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVE 1149 GGR + SGDT Q A+A R + + VA+++ I RQ P L Sbjct: 521 HGGRLILSGDTRQHGAVAASDALRAIEQHAKPRVAVLRTIRRQNPAL------------- 567 Query: 1150 RALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLY 1209 R + + ++P + Sbjct: 568 --------------ARTSEERRFIRRYRAVVKKASEGKQAESFDLLDQLGCVRELPDEVR 613 Query: 1210 EAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANI 1269 V E E ++V + +N + AG+LG V + Sbjct: 614 GVAVAGEYLTAMERGESVVVVAQTWNEVHAVNDAVRTALHSAGKLGPGTPTVT-YQPVDR 672 Query: 1270 RDGELRRLSTWETHRDALVLV---DNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVA 1326 + + R +E + A L I++ + + +G + R A Sbjct: 673 SESQKRDPRFYEPGQAAHFLRSYGRFKKGDTCEIAEANDRGVVLVKDGRRSTVGYRHA-- 730 Query: 1327 EGVTLYTPDTIRVGTGDRMRFTKSDR---ERGYVANSVWTVTAVSGDSVTLSDGQQTREI 1383 E + + + GDR++ + R + TV V + ++ Sbjct: 731 ERFIVTKRTDMEIAPGDRLQLKANGRSVEGTRLHNGELVTVANVDSSGALIVTDERGATK 790 Query: 1384 RPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHV 1443 Q + YA+T++G+QG + + + + + YV +SR ++ V Sbjct: 791 TLTSSQRL--LVRGYAVTSYGSQGKTVDTVLF---ADAGERAATNAQQWYVTISRGRKRV 845 Query: 1444 QVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMN--AERLFSTARELRDVAAGR 1498 V+T ++ + + ++ A + + L++T R +++ Sbjct: 846 VVFTPDKDQLRTRVESPGERELATEGERLALALRWTQQHRQELWATQRPRQEMHLRE 902 >UniRef50_B6AM13 Putative uncharacterized protein n=1 Tax=Leptospirillum sp. Group II '5-way CG' RepID=B6AM13_9BACT Length = 1140 Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats. Identities = 163/1040 (15%), Positives = 340/1040 (32%), Gaps = 121/1040 (11%) Query: 2 MSIAQVRSAGSAGNYYTDKDNYYVLGSMGER----WAGRGAEQLGLQGSVDKDVFTRLLE 57 M++ + S G YY KD+YY+ G+ W G+ A +LGL G + + L Sbjct: 1 MALGKNISPGQGETYY-RKDDYYLEREGGDEHKLEWGGKLAPELGLSGKAGAEDWKNALN 59 Query: 58 GRLPD-----GADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDA----HNQ 108 G PD G + G R G D APK++SM+ ++ + D + Sbjct: 60 GHFPDRIEIKGGSFKDPETGELLKRAGTDFVIEAPKTISMLYAATDNQEIKDWIMETQTE 119 Query: 109 AVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH 168 +E+ +R DG++ TG + H +R+ E +H H V N+T++ Sbjct: 120 VAKLTFDYLESQIGSRQGKDGKN-WETTGKALYGHTRHLLNREGECHIHDHGVFLNLTKN 178 Query: 169 NG-EWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMP 227 +G ++K +++D++ + + ++ G+E V GK+G ++ Sbjct: 179 SGGKYKAMTNDRMMQYQRPAKEMGD---------AHWAKRARERGFEI-VRGKYGEVQLA 228 Query: 228 GVP---VEAFSGRSQTIREAVGEDASLK--------------SRDVAALDTRKSKQHVDP 270 G +EA S RS+ I + + + L+ D A TRK+K+ + Sbjct: 229 GFTREQIEAASSRSRDIEQYIKDKWGLEWSKLPREERNEKRSMHDEAWERTRKAKKVHEL 288 Query: 271 EIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSER 330 + W + K G+D A R +Q + + ++ AI +ER Sbjct: 289 DRLEDRWKEEAKVIGYD-EAVRSLEEQFEKGIKPKYLSPEKRLEAARDSLKFAIEHHTER 347 Query: 331 KVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDRE-----KGLFTSGIH 385 + +++ + +E + IDEA LI + + L TS Sbjct: 348 ESAVKEGELIRTALQD-GRGKITMEDLKKAIDEAKDSGVLIRQADDLAKSKQNLVTSHEA 406 Query: 386 VLDELSVRALSRDIMKQNRVTVHPEK------------SVPRTAGYSDAVSVLAQDRPSL 433 + E + + + ++P + + A A ++ Sbjct: 407 LEREKRILSFEKAGRGSVEPVLNPLQAENALEAIQEKEGLILNAEQKAAARMILTTDNRY 466 Query: 434 AIVSGQGGAAGQRERVAELVM---------MAREQGREVQIIAADRRSQMNMKQDERLSG 484 + ++G G G+ + + + G +V + + +K + Sbjct: 467 SGINGYAGV-GKTTMLKPAIESLQNGAAFSVLTNAGYKVIGLGPQHSAVHALKDAGIIES 525 Query: 485 ELITGRRQ-LLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR--- 540 + + G + V++D+ + K+ + + + + ++ ++ Sbjct: 526 QTLQSWLADRQAGKTLNGKTVVVIDEAGLTNAKDMESAMKRIEKAGARAVLVGDIKQYES 585 Query: 541 TGTGSALMAMKDAGVNTYRWQGGEQRPAT-----------------------IISEPDRN 577 G A ++ AG+ T +++ I + Sbjct: 586 VAAGPAFAMLQKAGMETVYVTEMQRQNKAAENVKEAARLSVESPEKALEKMEIREIRNAE 645 Query: 578 VRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPV 637 RY +A ++ S E++ + + + +R L L T Sbjct: 646 ERYRAMADEYLKSKDP-RETLCLTGTHEARKAVNENVRESL----GLSGKGHGFTRYEAG 700 Query: 638 WLDSRSRYLRDMYRPGMVMEQWNP----ETRSHDRYVIDRVTAQSHSLTLRDAQGETQVV 693 + D Y G + +S + ++ V ++ ++ LR G + Sbjct: 701 DFTEAQKKRIDSYEEGQDIRFGKDYRSLGVKSGEIGKVEDVDKENGTVRLRMEDGRDVTM 760 Query: 694 RISSL-DSSWSLFRPEKMPVADGERLRVTGK-IPGLRVSGGDRLQVASVSEDAMTVVVPG 751 + + + E++ + GER+R+TG ++ G R +V + D++ + + Sbjct: 761 TPREMSGKGHEIGKVEEIEFSKGERIRITGNEHKKEGITNGMRGEVIESNPDSLRIRLDN 820 Query: 752 RAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRD 811 + P S G S +Q + L R+ + Sbjct: 821 GKDFEMKPGSRPVEIDHGYAQTGHSAQGLGAETVVLDLPSDSQTLNRRSFYTNLTRTKGE 880 Query: 812 VRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLA 871 V+ + + D R A ++R T+ + K E Q+ + Sbjct: 881 VKAF-TDDRERLAGAVSREKDKTMALDVEKESREERRAVEKERKDLGEEREREQKTMEQG 939 Query: 872 LPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLL 931 + + K + E E I +R + Sbjct: 940 KEEGPER----------RQEKERSPENDRSREKDRNIANNGEREEKTMDRERDEEKEKEN 989 Query: 932 VSRASYEAEKSILRHILEGK 951 + E++ L EG+ Sbjct: 990 RWSDLTDRERNRLETWKEGQ 1009 Score = 323 bits (826), Expect = 5e-86, Method: Composition-based stats. Identities = 183/1062 (17%), Positives = 361/1062 (33%), Gaps = 122/1062 (11%) Query: 664 RSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGK 723 + + H+ L + +GE + + + K +R+ + Sbjct: 138 KDGKNWETTGKALYGHTRHLLNREGECHIHDHGVFL-NLTKNSGGKYKAMTNDRMMQYQR 196 Query: 724 IPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKL-ENGWVETPGHSV 782 GD E +V E + A + Sbjct: 197 PAKEM---GDAHWAKRARERGFEIVRGKYGEVQLAGFTREQIEAASSRSRDIEQYIKDKW 253 Query: 783 SDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKT 842 + + + R+ + +++ ++ A+ + ++ Sbjct: 254 GLEWSKLPREERNEKRSMHDEAWERTRKAKKVHELDRLEDRWKEEAKVIGYDEAVRSLEE 313 Query: 843 RAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFT 902 + + +S +K A+ ++ A+ ++ A +L+ A Sbjct: 314 QFEKGIKPKYLSPEKRL--EAARDSLKFAIEHHTERESAVKEGELIRTALQDGRGKITME 371 Query: 903 ELGGEINAQIKRGDLL-YVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERV 961 +L I+ G L+ D L+ S + E EK IL G+ +V P++ + Sbjct: 372 DLKKAIDEAKDSGVLIRQADDLAKSKQNLVTSHEALEREKRILSFEKAGRGSVEPVLNPL 431 Query: 962 PGELMEK---------LTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMS----- 1007 E + L + Q+AA RMIL T +R++ + GYAGVGKTT + + Sbjct: 432 QAENALEAIQEKEGLILNAEQKAAARMILTTDNRYSGINGYAGVGKTTMLKPAIESLQNG 491 Query: 1008 AVNMLPESERPRVVGLGPTHRAVGEMRSAGV-DAQTLASFLHDTQLQQRSGETPDFSNTL 1066 A + + +V+GLGP H AV ++ AG+ ++QTL S+L D R T+ Sbjct: 492 AAFSVLTNAGYKVIGLGPQHSAVHALKDAGIIESQTLQSWLAD-----RQAGKTLNGKTV 546 Query: 1067 FLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIM 1126 ++DE+ + DM A I G RAV GD Q +++A G F + ++ + + Sbjct: 547 VVIDEAGLTNAKDMESAMKRIEKAGARAVLVGDIKQYESVAAGPAFAML-QKAGMETVYV 605 Query: 1127 KEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAK 1186 E+ RQ E V VE LE ++ Sbjct: 606 TEMQRQNKA-AENVKEAARLSVESPEKALEKME--------------------------- 637 Query: 1187 LAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHD 1246 Y A+ +Y + +TL +T +E R+ +N + + Sbjct: 638 ------------IREIRNAEERYRAMADEYLKS--KDPRETLCLTGTHEARKAVNENVRE 683 Query: 1247 VREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALV--------LVDNVYHRIA 1298 L + + + + +R+ ++E +D + ++ Sbjct: 684 SL----GLSGKGHGFTRYEAGDFTEAQKKRIDSYEEGQDIRFGKDYRSLGVKSGEIGKVE 739 Query: 1299 GISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRER-GYV 1357 + K++G + L+ +G ++PRE +G + + I G+R+R T ++ ++ G Sbjct: 740 DVDKENGTVRLRMEDGRDVTMTPREMSGKGHEIGKVEEIEFSKGERIRITGNEHKKEGIT 799 Query: 1358 ANSVWTVTAVSGDSVTLS-DGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIAL 1416 V + DS+ + D + E++PG ID YA T H AQG + Sbjct: 800 NGMRGEVIESNPDSLRIRLDNGKDFEMKPGSRPV--EIDHGYAQTGHSAQGLGAETVVLD 857 Query: 1417 EGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPD- 1475 ++ S Y L+R K V+ +TD+R+ A++ K A DV + + Sbjct: 858 LPSDSQ---TLNRRSFYTNLTRTKGEVKAFTDDRERLAGAVSREKDKTMALDVEKESREE 914 Query: 1476 -REVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDR 1534 R V + RE + G + Q P DR Sbjct: 915 RRAVEKERKDLGEEREREQKTMEQGK----------------EEGPERRQEKERSPENDR 958 Query: 1535 NGKSAGIWLNPLTTDDGNGLRGFSGEGRVKGSGDAQFVALQGSRNGESLLADNMQDGVRI 1594 + + N + + + + + E + ++G ++ Sbjct: 959 SREKDRNIAN--NGEREEKTMDRERDEEKEKENRWSDLTDR-----ERNRLETWKEGQKL 1011 Query: 1595 ARDNPDSGVVVRIAGEGRPWNPGAITGGRVWGDIPDNSVQPGAGNGEPVTAEVLAQRQAE 1654 + + + ++ E R TG + G + E + + + + Sbjct: 1012 RFPSENKELGIQAGEEARVEKMDRQTG-------QIDLKMQKDGRDVSLEPEYMKREREK 1064 Query: 1655 EAIRRETERRADEIVRKMAENKPDLPDGKTEQAVREIAGQER 1696 +A+ + ER+ E + E K + + +E A ++ Sbjct: 1065 KALEIDPERKTMEQKEQRKEEKAASKEKSPPEKEQEHAQEKD 1106 >UniRef50_UPI00016C4B0F TrwC protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4B0F Length = 882 Score = 407 bits (1044), Expect = e-111, Method: Composition-based stats. Identities = 182/925 (19%), Positives = 309/925 (33%), Gaps = 95/925 (10%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRL 60 M+ I Q A +A YY D Y + W GRGA LGL G V ++ F L + Sbjct: 1 MLRIVQQSHANAAKGYYAQSDYYVDGAELPGAWGGRGAALLGLSGEVQREDFHALCDNHD 60 Query: 61 PDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEAL 120 P + S R YD +F PK+VS++ LGGD+R++D AV + ++E Sbjct: 61 PRSGRQLTARTKSERTVL-YDWSFDVPKAVSLLYELGGDERILDVFRGAVQDTMNEIEPE 119 Query: 121 ASTRVMTDGQSETVLTGNLVMALFNHDTSRD------QEPQLHTHAVVANVT--QHNGEW 172 TRV G +E TGN+ A+F H TSR +PQLH H V N T + G W Sbjct: 120 TQTRVRKGGAAEDRTTGNMAWAMFVHRTSRPSKEDLKPDPQLHAHVTVFNATWDRDEGRW 179 Query: 173 KTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP-- 230 K ++ + + + +L + LGY E GK W + G+ Sbjct: 180 KA---------TQHRDLKRDAPYWQEAFHARLAAGLGDLGYGIERRGKD--WSIAGISPT 228 Query: 231 -VEAFSGRSQTIREAVGEDASLKSRDVAALD--TRKSKQHVDPEIKMAEWMQTLKETGFD 287 + FS R I + A L +R +K E + W L Sbjct: 229 LEKKFSRRRTEIDALAEKLGMTDPAQRATLGATSRLNKVDDGIESLRSYWRGRLDG---- 284 Query: 288 IRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGIL 347 ++ A+ + G A V+ AV ++A ER +LA + Sbjct: 285 ----KEQAELDGVRKAAEGGLAPSRAVSVEDAVRYSMAHHFERDAVVPEKRLLAEALR-Y 339 Query: 348 PPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTV 407 E RA EA + L + + TS + +E + + +RD Sbjct: 340 GIGVVRPEGLRA---EAERQGALTTTLDGQRVTTSRAVLAEEQKLLSFARDGRGTCVPIA 396 Query: 408 --HPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQI 465 H + +A AV + + + G G AG+ + E V R G V + Sbjct: 397 ANHRLRRDWLSAEQQGAVRHVLGSSDRVVLARGVAG-AGKTTLIQEAVEEIRAAGLPVAV 455 Query: 466 IAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGA 525 +A + ++ ++ + + + A G + VD+ L + + + + A Sbjct: 456 LAPTALAARDVLREHFAESDTVAAFLTDEKAQARMRGGVIWVDEAGLLGVHDLAQVFEVA 515 Query: 526 ARHNVQVLITDSGQRTGT---GSALMAMKDAGVNTYRWQGGEQRPATIISEP-------- 574 + +V++ ++ + G AL ++ +R + Sbjct: 516 REQDARVVLMGDTRQHRSVARGPALSLLESHAGLPVAEVKDIRRQKAAYKQAVEHLAAGR 575 Query: 575 ----------------DRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSEL 618 R A +A D+ + G+ ++ +E +T AIR Sbjct: 576 TEDGFAALDVLGWVREAGEDRNATIATDYMVATGGGQTALVVAPTHKEGEAVTAAIRERR 635 Query: 619 KTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQS 678 K G LG E L P+ L R R YR G V++ + ++ Sbjct: 636 KAAGQLG-EERAFNRLVPLNLTEAERADRHAYRGGEVLQFVRGAKGHVAGSRLAVTEPEA 694 Query: 679 HSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVA 738 SL + +R ++ VA G+ +R+T Sbjct: 695 ---------------VPVSLAGRFQAYRRAELKVAVGDVIRLTAGGKASD------GSRL 733 Query: 739 SVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQ---- 794 S + P L +G+ T S + Sbjct: 734 SNGTTFTVTGFTATGDLQLDTGKILPAGFGHLAHGYASTSHASQGRTVDRVLIAQPADTF 793 Query: 795 -MAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAI 853 + ++R+ R +Y + D+ E + R ++ I R + Sbjct: 794 VASTREQFYVSVSRARRLATIY-TDDKNALREAVQRAECRVSATDLIAFRGPKQLNRRVT 852 Query: 854 SHQKSALHTPAQQAIHLALPVVESK 878 Q+ A A+Q + + Sbjct: 853 FLQRLASLARARQFEAELAHARDER 877 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 120/648 (18%), Positives = 225/648 (34%), Gaps = 81/648 (12%) Query: 868 IHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYG 927 + ++ + LL EA + L E Q G Sbjct: 313 VRYSMAHHFERDAVVPEKRLLAEALRYGIGVVRPEGLRAEAERQGAL-------TTTLDG 365 Query: 928 TGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRF 987 + SRA E+ +L +G+ +P + + L++ Q+ A R +L +SDR Sbjct: 366 QRVTTSRAVLAEEQKLLSFARDGRGTCVP-IAANHRLRRDWLSAEQQGAVRHVLGSSDRV 424 Query: 988 TVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVG-EMRSAGVDAQTLASF 1046 + +G AG GKTT + + + + V L PT A +R ++ T+A+F Sbjct: 425 VLARGVAGAGKTTLIQEAVEEIR----AAGLPVAVLAPTALAARDVLREHFAESDTVAAF 480 Query: 1047 LHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAI 1106 L D + Q R + +DE+ ++G D+A+ + + R V GDT Q +++ Sbjct: 481 LTDEKAQAR------MRGGVIWVDEAGLLGVHDLAQVFEVAREQDARVVLMGDTRQHRSV 534 Query: 1107 APGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQ 1166 A G L ++ + VA +K+I RQ ++AV L E + L+ + Sbjct: 535 ARGPALSLLESHAGLPVAEVKDIRRQKAAYKQAVEHLAAGRTEDGFAALDVLGW------ 588 Query: 1167 EGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQ 1226 + I DY T + Sbjct: 589 ----------------------------------VREAGEDRNATIATDYMVAT-GGGQT 613 Query: 1227 TLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDA 1286 L+V +++ + + I + R+ AG+LG E+ L N+ + E + Sbjct: 614 ALVVAPTHKEGEAVTAAIRERRKAAGQLG-EERAFNRLVPLNLTEAERADRHAYRGGEVL 672 Query: 1287 LVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMR 1346 + + T + ++A Y ++V GD +R Sbjct: 673 QFV------------RGAKGHVAGSRLAVTEPEAVPVSLAGRFQAYRRAELKVAVGDVIR 720 Query: 1347 FTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQ 1406 T S + + + G + H+ YA T+H +Q Sbjct: 721 LTA---GGKASDGSRLSNGTTFTVTGFTATGDLQLDTGKILPAGFGHLAHGYASTSHASQ 777 Query: 1407 GASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTA 1466 G + + + + + + E YV++SR ++ +YTD++ +A+ A + +A Sbjct: 778 GRTVDRVLIAQPADTF--VASTREQFYVSVSRARRLATIYTDDKNALREAVQRAECRVSA 835 Query: 1467 HDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPAR 1514 D+ R R + + L +A R + A + R Sbjct: 836 TDLI---AFRGPKQLNRRVTFLQRLASLARARQFEAELAHARDERTGR 880 >UniRef50_C7HYW1 Conjugative relaxase domain protein n=1 Tax=Thiomonas intermedia K12 RepID=C7HYW1_THIIN Length = 945 Score = 405 bits (1039), Expect = e-110, Method: Composition-based stats. Identities = 196/960 (20%), Positives = 324/960 (33%), Gaps = 135/960 (14%) Query: 1 MMSIAQVRSAGSAGNYYTDKD---NYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLE 57 M+S +++ + G A YYTD+ YY + W G+ AEQLGL G VD T +L+ Sbjct: 1 MISKSEITNPGGAAGYYTDQQSAAEYYSGEQVPSAWHGKAAEQLGLTGPVDAAALTGILQ 60 Query: 58 GR----LPDGADLSRMQDGSNR-----------HRPGYDLTFSAPKSVSMMAMLGGDKRL 102 GR P+ + Q G R HR G+D T SAPKSVS+ A++ GD R Sbjct: 61 GRVIESDPETGEARERQLGRTRIDPDTGERSTEHRAGWDFTISAPKSVSVQALVHGDDRA 120 Query: 103 IDAHNQAVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVV 162 + AH A A+ +E + ++ G T L +A F H +SR +PQLHTHA++ Sbjct: 121 LQAHRAATTAALDYLERHGAQTRISSGN--FAKTDGLAVATFEHVSSRAGDPQLHTHALI 178 Query: 163 ANVTQHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHG 222 ANVT +G +LS+ E ++ ++ A +Y L +++ G+ + K G Sbjct: 179 ANVTTRDGRACSLSN---------EKLFQHRAAADAVYHNTLSRELQRAGFAVQHDSK-G 228 Query: 223 MWEMPGVPVEA---FSGRSQTIREAVGEDASLKS------RDVAALDTRKSKQHVDPEIK 273 E+ +A FS RS I A+ E ++ R AALDTR K+ + Sbjct: 229 HVEIASYSKDALRDFSTRSAEIEAALAERGQTRADSTALSRQAAALDTRHDKELPETRAA 288 Query: 274 MAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQ 333 A+ Q E + + A+ T T A D + AV +AIA LSER+ Sbjct: 289 HADRWQAQAE---------ALSVKPAERSTATAAAARMTRSDPEAAVDKAIAHLSEREAV 339 Query: 334 FTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREK-GLFTSGIHVLDELSV 392 F D+ + IE+ ID L+ K L+TS + E Sbjct: 340 FGKHDLHREAAR-FSAGSATIEQIEKEIDRRERSGDLVQQPGHKADLYTSRDALEAERDT 398 Query: 393 RALSRDIMKQNRVTVHP------------EKSVPRTAGYSDAVSVLAQDRPSLAIVSGQG 440 ++ + P +K + A + V G Sbjct: 399 AKRLDAGRGEHEQIMTPREFDTALRQFEKQKGFSLSDEQRAASRQILTGDDRFQGVQGLA 458 Query: 441 GAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITG--------RRQ 492 G G+ + + A +G V + M+++ + R Sbjct: 459 G-TGKTTMLQFVREAAEAKGWTVAGHSNGSEQAATMERESGIKSTTTASHLIDQQKTLRD 517 Query: 493 LLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDS---GQRTGTGSALMA 549 + A I+D+ + ++ + + + Q G A Sbjct: 518 APDRPAAPARELRIMDEASMSGQRNFRDVIKTTEQSGARTVFLGDKLQHQSVEAGRAFER 577 Query: 550 MKDA------GVNTYRWQGGEQRPATIIS------------------------------- 572 + G + R Q E A + Sbjct: 578 AQKHMPTATLGEASIRRQTTEHMKAAVSDVLARRHGDALRKIQTVEVRPERDKLAPGATR 637 Query: 573 -------EPDRNVRYARLAGDFAASVKAGEESVA-QVSGVREQAILTQAIRSELKTQGVL 624 D R+A D+ A + ++ L AIR+ELK G L Sbjct: 638 EQHRDAARADNAHLVQRIAKDYTALPADQRAKTLVITATNADRKALNNAIRAELKASGAL 697 Query: 625 GLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRS----HDRYVIDRVTAQSHS 680 T+ AL + + Y PG V++ R+ + + +++++ Sbjct: 698 A-DGKTVNALRSADMTKVEAKRAENYAPGQVVQLQQDAKRAPYAKGAQLEVVATDSRTNT 756 Query: 681 LTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIP-------GLRVSGGD 733 LT RD QG + + + + E A G+R+R T GL V G Sbjct: 757 LTCRDVQGREVRLDPAR--EKLTAYTRETREFAQGDRIRFTENHKLPTRDGEGLAVRNGQ 814 Query: 734 RLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSAT--VFAS 791 V D +T+ + + + + ++ + Sbjct: 815 SAIVEKTRGDQITLRIGEGKTAQRIEIDAKANLKAEHNYVTTSHSAQGLTYDKVFIHHNT 874 Query: 792 VTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLET 851 D T + R+ + LY+ + A + Q + Sbjct: 875 EGGRHGDRETYVNITRAREEATLYTQDVGKAEKQAGAELQKTAALDLQPERSPAPDRQPE 934 Score = 276 bits (705), Expect = 6e-72, Method: Composition-based stats. Identities = 176/804 (21%), Positives = 295/804 (36%), Gaps = 72/804 (8%) Query: 720 VTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPG 779 T +S Q + ++ + + A V +++ + + Sbjct: 182 TTRDGRACSLSNEKLFQHRAAADAVYHNTLSRELQRAGFAVQHDSKGHVEIASYSKDALR 241 Query: 780 HSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQ 839 + SA + A++ + A L+R + + T A + Sbjct: 242 DFSTRSAEIEAALAERGQTRADSTALSRQAAALDTRHDKELPETRAAHADRWQAQAEALS 301 Query: 840 IKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGT 899 +K T+ A +S + A+ + ++ F DL EA F+A Sbjct: 302 VKPAERSTATAAAARMTRSDPEAA----VDKAIAHLSEREAVFGKHDLHREAARFSAGSA 357 Query: 900 GFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLME 959 ++ EI+ + + GDL+ G+ L SR + EAE+ + + G+ +M Sbjct: 358 TIEQIEKEIDRRERSGDLVQQP---GHKADLYTSRDALEAERDTAKRLDAGRGEHEQIMT 414 Query: 960 ---------RVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVN 1010 + + L+ QRAA+R IL DRF VQG AG GKTT + V A Sbjct: 415 PREFDTALRQFEKQKGFSLSDEQRAASRQILTGDDRFQGVQGLAGTGKTTMLQFVREA-- 472 Query: 1011 MLPESERPRVVGLGP-THRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPD--FSNTLF 1067 E++ V G + +A R +G+ + T AS L D Q R + L Sbjct: 473 --AEAKGWTVAGHSNGSEQAATMERESGIKSTTTASHLIDQQKTLRDAPDRPAAPARELR 530 Query: 1068 LLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMK 1127 ++DE+SM G + G R V GD Q Q++ G+ F Q Sbjct: 531 IMDEASMSGQRNFRDVIKTTEQSGARTVFLGDKLQHQSVEAGRAFERAQKHMPTATLGEA 590 Query: 1128 EIVRQTPE-LREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAK 1186 I RQT E ++ AV ++ R AL +++V+ + A + + + A Sbjct: 591 SIRRQTTEHMKAAVSDVLARRHGDALRKIQTVEVRPERDKLAPGATREQHRDAARADNAH 650 Query: 1187 LAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHD 1246 L + I +DYT + R +TL++T N DR+ LN+ I Sbjct: 651 ---------------------LVQRIAKDYTALPADQRAKTLVITATNADRKALNNAIRA 689 Query: 1247 VREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLV--------DNVYHRIA 1298 + +G L V L +A++ E +R + + + + Sbjct: 690 ELKASGALADG-KTVNALRSADMTKVEAKRAENYAPGQVVQLQQDAKRAPYAKGAQLEVV 748 Query: 1299 GISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDR------ 1352 +T +D +G + P E +T YT +T GDR+RFT++ + Sbjct: 749 ATDSRTNTLTCRDVQGREVRLDPAR---EKLTAYTRETREFAQGDRIRFTENHKLPTRDG 805 Query: 1353 -ERGYVANSVWTVTAVSGDSVTLSDGQQT-REIRPGQEQAEQHIDLAYAITAHGAQGASE 1410 V GD +TL G+ + +A + Y T+H AQG + Sbjct: 806 EGLAVRNGQSAIVEKTRGDQITLRIGEGKTAQRIEIDAKANLKAEHNYVTTSHSAQGLTY 865 Query: 1411 TFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDV- 1469 TEG R E YV ++R ++ +YT + +QK A D+ Sbjct: 866 DKVFIHHNTEGGRHG--DRE-TYVNITRAREEATLYTQDVGKAEKQAGAELQKTAALDLQ 922 Query: 1470 --FEPKPDREVMNAERLFSTAREL 1491 P PDR+ ER + REL Sbjct: 923 PERSPAPDRQP-EPERERTLEREL 945 >UniRef50_A3EUE2 Probable TrwC protein n=2 Tax=Leptospirillum sp. Group II RepID=A3EUE2_9BACT Length = 1128 Score = 403 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 148/936 (15%), Positives = 319/936 (34%), Gaps = 107/936 (11%) Query: 2 MSIAQVRSAGSAGNYYTDKDNYYVLGSMGE----RWAGRGAEQLGLQGSVDKDVFTRLLE 57 M++ + S G YY KD+YY+ GE W G+ A ++GL G VD + + L Sbjct: 1 MALGKNISPGQGKTYY-RKDDYYLEREGGEDHKLEWGGKLASEMGLSGKVDAEDWKNALN 59 Query: 58 GRLPDGADLSR-----MQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDA----HNQ 108 G PDG + G R G D +PK+VSM+ ++ L D + Sbjct: 60 GHFPDGTRIKGGSFKDPDTGELLKRAGTDFVIESPKTVSMLYAATDNQDLKDWIVKTQAE 119 Query: 109 AVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH 168 + +E+ R DG++ TG + H T+R+ E +H H V NVT++ Sbjct: 120 VEKLSFDYLESQIGARRGKDGKT-WETTGQALYGHVRHFTNREGECFIHAHGVFLNVTRN 178 Query: 169 -NGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMP 227 +G+++ +++D++ + + + ++ GK+G ++ Sbjct: 179 SDGKYQAMTNDRMMQYQRLVKEMGD---------AHWARRLSEK-GIGIGKGKYGEVQIA 228 Query: 228 GVP---VEAFSGRSQTIREAVGED-------ASLKSRDVAALDTRKSKQHVDPEIKMAEW 277 +E S R + I + + E A+ +D A TRK+K+ + + W Sbjct: 229 DFSREQIEFSSSRGRNIEKYIREKWGVGREEATQAMKDEAWERTRKAKKVHELDGLETRW 288 Query: 278 MQTLKETGFD--IRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFT 335 + KE G D +R + ++ + L+P + ++A+ AI +ER+ Sbjct: 289 KEEGKEAGIDGVVRKIEQSFEKGIGQKYLSPSSRLEI---AREALKFAIEHHTERESAVK 345 Query: 336 YTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDR-----EKGLFTSGIHVLDEL 390 +++ + +E + ++EA + LI ++ L TS + E Sbjct: 346 GGELIRTALRD-GRGKITMEDMKKAVEEAKAEGSLIRQADALAGSKQNLVTSREALEREK 404 Query: 391 SVRALSRDIMKQNRVT------------VHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSG 438 + + + + + A A ++ ++G Sbjct: 405 RILKFEKAGRGAIDPVMNIFQAEATLRAIQEREGLTLNAEQKAAAMMILTTGNRYVGING 464 Query: 439 QGGAAGQRERVAELVM---------MAREQGREVQIIAADRRSQMNMKQDERLSGELITG 489 G G+ + + + G EV + + ++ + + Sbjct: 465 YAG-TGKTTMLKPAIESLQNGAAFSALKNAGYEVIGLGPQHSAVHALRDAGIIESRTLQS 523 Query: 490 RRQ-LLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR---TGTGS 545 G A T + V++D+ + K+ + + + + ++ ++ G Sbjct: 524 WLADRQAGKALTEKTVVVIDEAGLTNAKDLESAMKRIEKAGARAVLVGDIKQYESVAAGP 583 Query: 546 ALMAMKDAGVNTYRWQGGEQRPAT-----------------------IISEPDRNVRYAR 582 A ++ AG+ T +++ I + R+ Sbjct: 584 AFAMLQKAGMETVYVTEMQRQRNAPENVREAARLSIESPEKALEKLSIREIRNPQERFKA 643 Query: 583 LAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSR 642 L+ ++ S+ +E++ + + + IR L L + Sbjct: 644 LSEEYLKSLDK-KETLVLTGTHEARKAVNENIREAL----NLKGKGEEFSRFEAGDFTEA 698 Query: 643 SRYLRDMYRPGMVMEQWNP----ETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSL 698 + D Y G + ++ + + V + ++ L G + V+ L Sbjct: 699 RKKRIDSYEVGQDVRFGKDYRSMGVQAGEVGKVADVDREKGTVLLEMEDGRSVVLTPREL 758 Query: 699 -DSSWSLFRPEKMPVADGERLRVTGKI-PGLRVSGGDRLQVASVSEDAMTVVVPGRAEPA 756 + + E + + G+R+R+TG ++ G R +V D + V + E Sbjct: 759 SGKGHEIGQLETVELTKGDRIRITGNELKQEGITNGMRGEVIESKHDTLLVRLDNGKEFD 818 Query: 757 TLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYS 816 P S G S ++ + + L R+ +V ++ Sbjct: 819 LKPGSRPVEIDHGYAQTGHSAQGLGAETVILDLPSDSRTLNERSFYTNLTRTKGEVVAFT 878 Query: 817 SLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETA 852 E + ++ + + ++R E + Sbjct: 879 DDQERLSGAVTRKNDKTMALDVEKQSREKTRQREQS 914 Score = 306 bits (782), Expect = 6e-81, Method: Composition-based stats. Identities = 169/931 (18%), Positives = 331/931 (35%), Gaps = 95/931 (10%) Query: 794 QMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAI 853 + A R+ + +++ ++ + V +I+ + + + Sbjct: 258 EEATQAMKDEAWERTRKAKKVHELDGLETRWKEEGKEAGIDGVVRKIEQSFEKGIGQKYL 317 Query: 854 SHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIK 913 S A++A+ A+ ++ A +L+ A ++ + Sbjct: 318 SPSSRL--EIAREALKFAIEHHTERESAVKGGELIRTALRDGRGKITMEDMKKAVEEAKA 375 Query: 914 RGDLL-YVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGEL------- 965 G L+ D G L+ SR + E EK IL+ G+ A+ P+M E Sbjct: 376 EGSLIRQADALAGSKQNLVTSREALEREKRILKFEKAGRGAIDPVMNIFQAEATLRAIQE 435 Query: 966 --MEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMS-----AVNMLPESERP 1018 L + Q+AA MIL T +R+ + GYAG GKTT + + A ++ Sbjct: 436 REGLTLNAEQKAAAMMILTTGNRYVGINGYAGTGKTTMLKPAIESLQNGAAFSALKNAGY 495 Query: 1019 RVVGLGPTHRAVGEMRSAGV-DAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGN 1077 V+GLGP H AV +R AG+ +++TL S+L D R T+ ++DE+ + Sbjct: 496 EVIGLGPQHSAVHALRDAGIIESRTLQSWLAD-----RQAGKALTEKTVVVIDEAGLTNA 550 Query: 1078 TDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELR 1137 D+ A I G RAV GD Q +++A G F + ++ + + E+ RQ Sbjct: 551 KDLESAMKRIEKAGARAVLVGDIKQYESVAAGPAFAML-QKAGMETVYVTEMQRQRNA-P 608 Query: 1138 EAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLK 1197 E V +E LE + Sbjct: 609 ENVREAARLSIESPEKALEKLS-------------------------------------- 630 Query: 1198 GEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKE 1257 P ++A+ +Y +++TL++T +E R+ +N I + L + Sbjct: 631 -IREIRNPQERFKALSEEYLKSLD--KKETLVLTGTHEARKAVNENIREALN----LKGK 683 Query: 1258 QVMVPVLNTANIRDGELRRLSTWETHRDA--------LVLVDNVYHRIAGISKDDGLITL 1309 + + +R+ ++E +D + + ++A + ++ G + L Sbjct: 684 GEEFSRFEAGDFTEARKKRIDSYEVGQDVRFGKDYRSMGVQAGEVGKVADVDREKGTVLL 743 Query: 1310 QDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSD-RERGYVANSVWTVTAVS 1368 + +G + +++PRE +G + +T+ + GDR+R T ++ ++ G V Sbjct: 744 EMEDGRSVVLTPRELSGKGHEIGQLETVELTKGDRIRITGNELKQEGITNGMRGEVIESK 803 Query: 1369 GDSVTLS-DGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMA 1427 D++ + D + +++PG ID YA T H AQG I ++ Sbjct: 804 HDTLLVRLDNGKEFDLKPGSRPV--EIDHGYAQTGHSAQGLGAETVILDLPSDS---RTL 858 Query: 1428 GFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFST 1487 S Y L+R K V +TD+++ + A+ K A DV + ++ +R S+ Sbjct: 859 NERSFYTNLTRTKGEVVAFTDDQERLSGAVTRKNDKTMALDVEKQSREKT---RQREQSS 915 Query: 1488 ARELRDVAAGRAVLRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLT 1547 E ++ AG R+ A + +A + + Sbjct: 916 GLEKENIVAGYEKEREERKERTGREAIPESRDVAEKDQILA------ENEQKEALTSKEW 969 Query: 1548 TDDGNGLRGFSGEGRVKGSGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRI 1607 + EG V + + +++ ++ + R + + Sbjct: 970 LQKTKSGMDTTHEGPVPDHSRIRDAETPNGKE-KTMERTGEKEFEYLTRQERERFERWEV 1028 Query: 1608 AGEGRPWNPGAITGGRVWGDIPDNSVQPGAGNGEPVTAEVLAQRQAEEAIRRETERRADE 1667 + R G + + + G + E +RE ER+ Sbjct: 1029 GQKLRFPQENRDLGMKAGEVVQVEEMDRKTGIITLRKENGEEAKLVPEHTKREMERQKSM 1088 Query: 1668 IVRKMAENKPDLPDGKTEQAVREIAGQERDR 1698 R + + ++ +E+ ER R Sbjct: 1089 EERSPERKTMEQGKEERKEERKEVPRIERQR 1119 >UniRef50_C5SIG5 Conjugative relaxase domain protein n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SIG5_9CAUL Length = 1047 Score = 388 bits (996), Expect = e-106, Method: Composition-based stats. Identities = 182/1020 (17%), Positives = 354/1020 (34%), Gaps = 155/1020 (15%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGE---RWAGRGAEQLGLQGSVDKDVFTRLLE 57 M+ I +++SA +G+YY KD+YYV G RW G GA QLGL G + F +LL+ Sbjct: 1 MLKITRLKSASRSGDYY-GKDDYYVTGEANTPNLRWGGEGAAQLGLVGEANSLDFKKLLK 59 Query: 58 GR--LPDGADLSRMQDGSN----------------RHRPGYDLTFSAPKSVSMMAMLGGD 99 G PDG+ LS+ + +H PG+D+TFSA KS S+MA++ GD Sbjct: 60 GINPDPDGSALSKADEALREQAGASGETDPERTIPKHAPGWDMTFSATKSASIMALVAGD 119 Query: 100 KRLIDAHNQAVDFAVRQVEAL-ASTRVMTDGQS-ETVLTGNLVMALFNHDTSRDQEPQLH 157 R+ A N++V + E A TR TDG + + +LTGNL A +H SR +P++H Sbjct: 120 DRIQAAFNRSVQSTMDYAEKHFAITRQRTDGGAPKQILTGNLTYATTSHSMSRAGDPEMH 179 Query: 158 THAVVANVTQ-HNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETE 216 H V+AN T+ +G W+ L + +Y +Q G + + + +++ LGY Sbjct: 180 NHVVLANATRMEDGTWRALETAP---------LYKHQQFLGNVQKAEFAHELKKLGYNLV 230 Query: 217 VVGKHGMWEMPGVP------------------VEAFSGRSQTI-------REAVGEDASL 251 G WE+ ++ FS R I G + S Sbjct: 231 QGKTQGTWEIAEFSAAYRGENDKAGIGPADLLIDTFSKRHVEIMGKIAAAEADKGRELSK 290 Query: 252 KSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPA-- 309 R L R K D +++ A W + ++ G D+ AA R + LTP Sbjct: 291 GERQTLILKDRPQKLLTDRDVQQALWKEVARDAGVDLDQIVSAAKTREVGQDLTPQRKGD 350 Query: 310 -----------------SQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENG 352 + ++ + + FT V+ + + Sbjct: 351 IGLAGKVMAYIDEKVLGRTRDLSAEASLALGLRSQERQSTIFTPYAVIFDAMLANGNRHR 410 Query: 353 VIERARAGIDEAISREQLIPLDREKGLF-TSGIHVLDELSVRALSRDIMKQNRV------ 405 + + G + R +++ DREK T+ + E ++ +++ Sbjct: 411 IQDYQATG---FLQRPEIVKADREKLAHITTQRAITMEDAIVERVIRSQARSKAFTPDVS 467 Query: 406 ------TVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRER---VAELVMMA 456 V K++ + V + D +++ G G G+ V + + Sbjct: 468 DRAMYGIVADGKALAPNTQQAAVVQHVLTDGARYSVIHGSAG-TGKTTTFDLVRQTLDRL 526 Query: 457 REQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFT----------PGSTVI 506 E+ +A +++ + ++ E + + + G ++ Sbjct: 527 SAGQIEIVALAPTHKAKGELADRAGIATETVQMFLLQQQKGSTQTAPSSQMANLKGKWLL 586 Query: 507 VDQGEKLSLKETLTLLDGAARHNV-QVLITDSGQRTG---TGSALMAMKDAGVNTYRWQG 562 VD+G LS + ++D A R V +V+ + ++ G+ AG +T + Sbjct: 587 VDEGSMLSNVQMDRIIDVAERSGVDKVIFSFDERQLAAMEAGAPTRLAMHAGASTVYLKD 646 Query: 563 GEQRPAT------------------------IISEPDRNVRYARLAGDFAASVKAGEESV 598 ++ ++E N A + G ++ Sbjct: 647 NVRQAQMPVLRAGIMKMADGKPWEALPSIRPYVTETRSNDDQILARAAVAKWREMGPDTK 706 Query: 599 AQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQ 658 V + + + IR+EL+ G++G +V + Y G + Sbjct: 707 VVVGTNKMRGLANAMIRTELQGMGLVGREDVAHKTYVSENRSPEQLGMITAYALGQRIIF 766 Query: 659 WNPETRS----HDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSS-----WSLFRPEK 709 + + H + + + +++ LTL+ + + ++ L S + ++R + Sbjct: 767 HKADEANRIGRHTVHSVVGIDMRTNRLTLQSTEYGKRSYNLAGLTSGRDEPTFGVYREQT 826 Query: 710 MPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPAT-----LPVSDSP 764 + ++ G++L V+ D VA++ + + + ++ Sbjct: 827 IKLSVGDQLAWNITDKKAGVTNNDAFTVAAIKGSKLATQREVEIDGVRTLKTQVFDLEND 886 Query: 765 FTALKLENGWVET----PGHSVSDSATVFASV-TQMAMDNATLNGLARSGRDVRLYSSLD 819 A + +G+ T G S V S + A +R ++ + + Sbjct: 887 PVARFMSHGYSLTANRAQGASFGKVVAVLGSYMGEFANQARGYVMASRPRQEFQWVTDDL 946 Query: 820 ETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKK 879 ++ I + P + + Sbjct: 947 KSLFRRLAENDGINPSALNHIDRAMDLADKADRVKPAPQPDKAPEIPKPEPVTAKAKETE 1006 Score = 224 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 130/693 (18%), Positives = 242/693 (34%), Gaps = 93/693 (13%) Query: 864 AQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVA 923 A+ ++ L L E + F+ ++ +A + ++R +++ D Sbjct: 374 AEASLALGLRSQERQSTIFTPYAVIFDAMLANGNRHRIQDYQA--TGFLQRPEIVKADRE 431 Query: 924 KGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKL---------TSGQR 974 K + ++ + E +I+ ++ + V M + + Q Sbjct: 432 KLAH---ITTQRAITMEDAIVERVIRSQARSKAFTPDVSDRAMYGIVADGKALAPNTQQA 488 Query: 975 AATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMR 1034 A + +L R++V+ G AG GKTT F V ++ L + +V L PTH+A GE+ Sbjct: 489 AVVQHVLTDGARYSVIHGSAGTGKTTTFDLVRQTLDRLSAGQ-IEIVALAPTHKAKGELA 547 Query: 1035 S-AGVDAQTLASFLHDTQLQ----QRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAA 1089 AG+ +T+ FL Q S + + L+DE SM+ N M R + Sbjct: 548 DRAGIATETVQMFLLQQQKGSTQTAPSSQMANLKGKWLLVDEGSMLSNVQMDRIIDVAER 607 Query: 1090 GGG-RAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQT--PELREAVYSLINR 1146 G + + S D QL A+ G P RL + A +K+ VRQ P LR + + + Sbjct: 608 SGVDKVIFSFDERQLAAMEAGAPTRLAM-HAGASTVYLKDNVRQAQMPVLRAGIMKMADG 666 Query: 1147 DVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPM 1206 AL + + Sbjct: 667 KPWEALPSIRPY------------------------------------------VTETRS 684 Query: 1207 TLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNT 1266 + + R + E T +V N+ R + N+MI + G +G+E V + Sbjct: 685 NDDQILARAAVAKWREMGPDTKVVVGTNKMRGLANAMIRTELQGMGLVGREDVAHKTYVS 744 Query: 1267 ANIRDGELRRLSTWETHRDALVLV--------DNVYHRIAGISKDDGLITLQDAEGNTRL 1318 N +L ++ + + + + H + GI +TLQ E R Sbjct: 745 ENRSPEQLGMITAYALGQRIIFHKADEANRIGRHTVHSVVGIDMRTNRLTLQSTEYGKRS 804 Query: 1319 ISPREAVAEGVTL----YTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTL 1374 + + Y TI++ GD++ + +D++ G N +TV A+ G + Sbjct: 805 YNLAGLTSGRDEPTFGVYREQTIKLSVGDQLAWNITDKKAGVTNNDAFTVAAIKGSKLAT 864 Query: 1375 SDGQQ--------TREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLM 1426 + T+ + + + Y++TA+ AQGAS +A+ G+ Sbjct: 865 QREVEIDGVRTLKTQVFDLENDPVARFMSHGYSLTANRAQGASFGKVVAVLGSYMGEFAN 924 Query: 1427 AGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQ-KGTAHDVFEPKPD----REVMNA 1481 YV SR +Q Q TD+ + + +A + + D + + Sbjct: 925 QARG--YVMASRPRQEFQWVTDDLKSLFRRLAENDGINPSALNHIDRAMDLADKADRVKP 982 Query: 1482 ERLFSTARELRDVAAGRAVLRQAGLAGGDSPAR 1514 A E+ A ++ + Sbjct: 983 APQPDKAPEIPKPEPVTAKAKETEKEKSEVANP 1015 >UniRef50_Q3SI89 Putative ATP-dependent exoDNAse (Exonuclease V) alpha subunit n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SI89_THIDA Length = 907 Score = 382 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 149/861 (17%), Positives = 295/861 (34%), Gaps = 121/861 (14%) Query: 1 MMSIAQVRSAGSAGNY--Y-------TDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDV 51 M+S++ + + A Y Y +++YY RW G+ A+++ L G + Sbjct: 1 MLSVSVIGAGSEAAGYAAYQENEVAAAQREDYYAGEGDVGRWVGKAAQEMSLAGELKPGQ 60 Query: 52 FTRLLEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDK---RLIDAHNQ 108 L+G P+ + ++ +H+ G+DLTFSAPKSVS + + + + DA N Sbjct: 61 LLAGLQGFHPETGEAL-SKNAGEKHKGGWDLTFSAPKSVSCVWAVADPETRGAIEDAQNA 119 Query: 109 AVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH 168 A A++ +E + + ++E + A++ H TSR+ +PQLHTH V N Q Sbjct: 120 AAARALQFLEESGAFTSRS--RNEPGPVEGVAAAMYQHGTSREADPQLHTHVAVLN-VQP 176 Query: 169 NGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKH-GMWEMP 227 +G + D K +A G +YR +L +++ LG E GK + ++P Sbjct: 177 DGT--AMDFDTRWK-----------MAAGAVYRAELAAEMQKLGLRVEADGKSFRVVDVP 223 Query: 228 GVPVEAFSGRSQTIREAVGEDA--SLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETG 285 + FS R I EA+ S K+ +VAAL TRK K+ + A+W E G Sbjct: 224 AAVEKEFSTRRGQIEEALAAKGLKSAKAAEVAALSTRKGKEPTTRDELFADWKTRAAEHG 283 Query: 286 FDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVG 345 F + + + Q ++ + + + L+E+ FT + A Sbjct: 284 FSLESIQAL-----------RNAPRQQAEELD--LDEILGKLTEQASTFTPQQLAAAVAV 330 Query: 346 ILPPENGVIERARAGIDEAISREQLIPLDREK-----------GLFTSGIHVLDELSVRA 394 + G + + + + L+ L+ +K +T+ + E + Sbjct: 331 EMQGRGG-ADAIQKALRDLTKHPDLVRLESDKPRHLMRGEPTETRYTTREMLGIEQGILD 389 Query: 395 LSRDIMKQNRVTVHPEKSV----PRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVA 450 S ++ T A+ + +D ++ I+ G G G+ + Sbjct: 390 KSMARQTDMSHRADIAAAIAARPTMTDEQKAALKHVCEDPGAVKIIEGMAG-TGKSYLMD 448 Query: 451 ELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLE--GMAFTPGSTVIVD 508 G EV+ A ++ ++ ++ + I L+ S +++D Sbjct: 449 AARESWEAAGFEVEGAALAGKAASGLESGADINSKTIHSLLFQLDSGQRQLHSKSILVID 508 Query: 509 QGEKLSLKETLTLLDGAARHNVQVLITDSGQRTG---TGSALMAMKDAGVNTYRWQGGEQ 565 +G + ++ +LD + + ++ + G A + + + + R + + Sbjct: 509 EGGMVGSRQLARVLDHVHKAGAKAVMVGDSWQLQPIDAGGAFRLLSER-LGSARLENIVR 567 Query: 566 RPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLG 625 + + V + + L ++ +G+L Sbjct: 568 QKHEV-----------------------DRRVVRLFADGKAAEAL-----ESMRERGLLK 599 Query: 626 LPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRD 685 E A+ + D +PG + + A + + Sbjct: 600 TAETRAQAMQEMVRDWAQARDPS--KPGESIM----------------LAATRSEVAHLN 641 Query: 686 AQGETQVVRISSLDSSWSLFRPEKM-PVADGERLRVTGKIPGLRVSGGDRLQVASV---- 740 + L + M A G+R+ V G+ V SV Sbjct: 642 NSARQILKAEGRLAGGLQVPTAGGMKEFAVGDRIIFGKNNSVFGVKNGELGTVESVRFNK 701 Query: 741 -SEDAMTVVVPGRAEPA-TLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMD 798 + +T T+ F V+ M+ Sbjct: 702 TGQVEITARHDNGKAVKFTVGEEKGQFEVFDYGYAMTVHKAQGVTVDRAFVLPSDSMSSR 761 Query: 799 NATLNGLARSGRDVRLYSSLD 819 T ++R + R+Y + D Sbjct: 762 EWTYVAMSRHRLEARMYITRD 782 Score = 210 bits (534), Expect = 4e-52, Method: Composition-based stats. Identities = 102/653 (15%), Positives = 195/653 (29%), Gaps = 129/653 (19%) Query: 856 QKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRG 915 + + + + L + + F+ L G + + K Sbjct: 293 RNAPRQQAEELDLDEILGKLTEQASTFTPQQLAAAVAVEMQGRGGADAIQKALRDLTKHP 352 Query: 916 DLLYVDVAK-------GYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELME- 967 DL+ ++ K +R E+ IL + + + + Sbjct: 353 DLVRLESDKPRHLMRGEPTETRYTTREMLGIEQGILDKSMARQTDMSHRADIAAAIAARP 412 Query: 968 KLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTH 1027 +T Q+AA + + E +++G AG GK+ A E+ V G Sbjct: 413 TMTDEQKAALKHVCEDPGAVKIIEGMAGTGKSYLM----DAARESWEAAGFEVEGAALAG 468 Query: 1028 RAVGEMRS-AGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYAL 1086 +A + S A ++++T+ S L Q SG+ S ++ ++DE MVG+ +AR Sbjct: 469 KAASGLESGADINSKTIHSLL----FQLDSGQRQLHSKSILVIDEGGMVGSRQLARVLDH 524 Query: 1087 IAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPE-LREAVYSLIN 1145 + G +AV GD+ QLQ I G FRL R A ++ IVRQ E R V + Sbjct: 525 VHKAGAKAVMVGDSWQLQPIDAGGAFRLLSERLG--SARLENIVRQKHEVDRRVVRLFAD 582 Query: 1146 RDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVP 1205 AL + + + Sbjct: 583 GKAAEALESMRERGLLKT--------------------------------------AETR 604 Query: 1206 MTLYEAIVRDYT-GRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVL 1264 + +VRD+ R P +++++ + LN+ + + G L + V Sbjct: 605 AQAMQEMVRDWAQARDPSKPGESIMLAATRSEVAHLNNSARQILKAEGRLAGG---LQVP 661 Query: 1265 NTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREA 1324 +++ + + + + + + + + G + + + Sbjct: 662 TAGGMKEFAVGDRIIFGKNNSVFGVKNGELGTVESVRF--------NKTGQVEITARHDN 713 Query: 1325 VAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIR 1384 + + D TV G Sbjct: 714 GKAVKFTVGEEKGQFEVFDY--------------GYAMTVHKAQG--------------- 744 Query: 1385 PGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQ 1444 +T A L + E YVA+SR + + Sbjct: 745 ---------------VTVDRA--------FVLPSDSMS-----SREWTYVAMSRHRLEAR 776 Query: 1445 VYT--DNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVA 1495 +Y D+ + T ++ A K T+ D + E S RE + + Sbjct: 777 MYITRDSVEALTKTMSRAQGKETSLDFKLAATSEKTDAPESTTSLDREATEAS 829 >UniRef50_B1ZQ33 Conjugative relaxase domain protein n=2 Tax=Opitutus terrae PB90-1 RepID=B1ZQ33_OPITP Length = 907 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 179/932 (19%), Positives = 332/932 (35%), Gaps = 70/932 (7%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMG--ERWAGRGAEQLGLQGSVDKDVFTRLLEG 58 M+++ +R+ + + + K++Y+ G W G+GA+ LGL+G V VF L Sbjct: 1 MITVGVIRNGATYLSRHLCKNDYWTEGEKRIEGEWIGKGAKALGLEGGVQTKVFDALRRN 60 Query: 59 RLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVE 118 R P+ + ++ +R +D+ SAPK VS++AMLGGD+R++ A + +V A+ ++E Sbjct: 61 RHPETGEQLTAREDKDR-VAFFDVQLSAPKDVSVLAMLGGDQRIVAAFHDSVKIALEEME 119 Query: 119 ALASTRVMTDGQSETVL---TGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTL 175 A+ R + TGN ALF HDTSRD +PQLH HAV++N T Sbjct: 120 RFAAVRERRGESRSSEDFRLTGNFAGALFFHDTSRDLDPQLHAHAVLSNATWD------- 172 Query: 176 SSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP--VEA 233 + + ++ +L ++ LGYET + G + + GV E Sbjct: 173 AERGEWFALQPAEMLRASGYLRQVLYRELAGRLRELGYETYGMNSTG-FSVRGVEHLRER 231 Query: 234 FSGRSQTIREAVGEDASLKSRDVAALDT----RKSKQHVDPEIKMAEWMQTLKETGFDIR 289 FS R++ I++ E A K R + R+S+ + P + E + + Sbjct: 232 FSKRTRHIQQLAEEFAQKKGRKPTKREVEVLVRESRANKLPNVSTREVRARQRAE-LNPD 290 Query: 290 AYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPP 349 AD R PG G V + A+ + ER +VL + + P Sbjct: 291 EAAALADLVRTARAKAPGQRISHGQVV-TVLEAALRHVFERSSVVREGEVLNAALELHPD 349 Query: 350 ENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHP 409 + E A + + + E + IH + ++R + + + Sbjct: 350 FSRWRELREAL------QGRTDAIRSEGEMSLRPIHREETATIRRVVEGRNTRFPLGDAT 403 Query: 410 EKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQI-IAA 468 T G A L ++ L+++ G G G+ + + R G + + + Sbjct: 404 LLPERLTRGQLAAARALLANKDFLSVLVGDAG-TGKTTVLTAIQDAHRAAGGQPFLPLTP 462 Query: 469 DRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARH 528 R++ + + + A ++VD+ LS ++ L A Sbjct: 463 TTRAREALVDAGFERADTVQRFLVSETLQAEAVRRVLLVDEAGLLSTEQLDRLTRIAQER 522 Query: 529 NVQVLITDSGQRTGT---GSALMAMKDAGVNTYRWQGGEQRPAT---------------- 569 +VL+ ++ + G A+ + R Sbjct: 523 RARVLLVGDTKQHYSVQRGDAMRNVIRNSGTPVVRLSEVLRQREEKDRHFSRLLAAGNVS 582 Query: 570 -----------IISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSEL 618 + D + A +A +V G E++ + + + R+ L Sbjct: 583 DALLYAERRGMMRELGDDETLFTSAAEHYAENVAKGTETLVVIPFWEDIDRFSVHARTAL 642 Query: 619 KTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQS 678 + +G+LG EV A+ P+ + D YR G + TR R V Sbjct: 643 RRRGLLGDAEVVREAVRPLTWTEEQKAHWDQYRVGDRLLFVRD-TRFFKRGSAAVVKKIL 701 Query: 679 HSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVA 738 + + E S+ + R + +PVA G+RL + G+ + GD VA Sbjct: 702 PDGLHVEGENERYAKITRKQRGSFDVGRAQMLPVAAGDRLLMRGREEEQGFANGDFRDVA 761 Query: 739 SVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFA---SVTQM 795 +V A V + E + F A + + ++ Q Sbjct: 762 AVDPIANRVFLSDGKEL------PADFRAWTYGHALTSYRSQGSTAEESLLVLGEVAEQA 815 Query: 796 AMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISH 855 M G R +Y S + P + +E ++ + A+ Sbjct: 816 LMRRQFYVGNTRYRGAHHIYVSHRDAIITRLARPDPGRQLATEFVRRHRIFPAERIAMGR 875 Query: 856 QKSALHTPAQQAIHLALPVVESKKLAFSMVDL 887 + +A E++++ +++ Sbjct: 876 LHRMGARMRDAWLSIAARWQETREVVREKMEI 907 Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 114/642 (17%), Positives = 203/642 (31%), Gaps = 74/642 (11%) Query: 861 HTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYV 920 H + AL V + ++L A + + + EL + + Sbjct: 313 HGQVVTVLEAALRHVFERSSVVREGEVLNAALELHPDFSRWRELREALQGR--------- 363 Query: 921 DVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMI 980 G + R + E + +R ++EG+ PL + L E+LT GQ AA R + Sbjct: 364 -TDAIRSEGEMSLRPIHREETATIRRVVEGRNTRFPLGDATL--LPERLTRGQLAAARAL 420 Query: 981 LETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVD- 1039 L D +V+ G AG GKTT A+ A + + L PT RA + AG + Sbjct: 421 LANKDFLSVLVGDAGTGKTTVLTAIQDAHRA---AGGQPFLPLTPTTRAREALVDAGFER 477 Query: 1040 AQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGD 1099 A T+ FL LQ + + L+DE+ ++ + R + R + GD Sbjct: 478 ADTVQRFLVSETLQAEAVRR------VLLVDEAGLLSTEQLDRLTRIAQERRARVLLVGD 531 Query: 1100 TDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPE-LREAVYSLINRDVERALSGLESV 1158 T Q ++ G R S V + E++RQ E R L +V AL Sbjct: 532 TKQHYSVQRGDAMRNVIRNSGTPVVRLSEVLRQREEKDRHFSRLLAAGNVSDAL------ 585 Query: 1159 KPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTG 1218 A +G ++ Sbjct: 586 ---------------------------------LYAERRGMMRELGDDETLFTSAAEHYA 612 Query: 1219 RTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLS 1278 +TL+V ED + + G LG +V+ + + + Sbjct: 613 ENVAKGTETLVVIPFWEDIDRFSVHARTALRRRGLLGDAEVVREAVRPLTWTEEQKAHWD 672 Query: 1279 TWETHRDALVLVDNVYHRIAGISKDDGLI--TLQDAEGNTRLISPREAVAEGVTLYTPDT 1336 + L + D + + + ++ L N R + Sbjct: 673 QYRVGDRLLFVRDTRFFKRGSAAVVKKILPDGLHVEGENERYAKITRKQRGSFDVGRAQM 732 Query: 1337 IRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDL 1396 + V GDR+ + E+G+ V AV + + + Sbjct: 733 LPVAAGDRLLMRGREEEQGFANGDFRDVAAVDPIANRVFLSDGKE-----LPADFRAWTY 787 Query: 1397 AYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDA 1456 +A+T++ +QG++ ++ + G + LM YV +R + +Y +R Sbjct: 788 GHALTSYRSQGSTAEESLLVLGEVAEQALM--RRQFYVGNTRYRGAHHIYVSHRDAIITR 845 Query: 1457 INNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGR 1498 + + R + + R R A R Sbjct: 846 LARPDP---GRQLATEFVRRHRIFPAERIAMGRLHRMGARMR 884 >UniRef50_A9I2Z2 Conjugal transfer protein n=1 Tax=Bordetella petrii DSM 12804 RepID=A9I2Z2_BORPD Length = 908 Score = 363 bits (932), Expect = 3e-98, Method: Composition-based stats. Identities = 151/925 (16%), Positives = 309/925 (33%), Gaps = 137/925 (14%) Query: 55 LLEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAV 114 +L+G G R + R DLTF APKS+++ A++GGD+RLI A+++AV A+ Sbjct: 1 MLQGDFGRGVAAGRSIRKDAKARAALDLTFGAPKSITLQALIGGDERLIHANDKAVASAL 60 Query: 115 RQVEAL-ASTRVMTDGQSETVLTGNLVMALFNHDTSR-----DQEPQLHTHAVVANVTQH 168 VE R +G+S TGNL++A F H+T+R +P LH HA++ N+TQ Sbjct: 61 VYVEQHLTMGRRKVNGKSRVEHTGNLIIAKFRHETARPTEGAAPDPHLHIHALLMNLTQR 120 Query: 169 -NGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKH-GMWEM 226 +G W LS+ E ++ +Y+ +L+ V ALGY H + + Sbjct: 121 VDGSWVALSN---------EEIFKLLRVTDSIYQAELERNVRALGYAVRHEKSHIELAHI 171 Query: 227 PGVPVEAFSGRSQTIREAVGEDASLKSRDVAALD---TRKSKQHVDPEIKMAEWMQTLKE 283 +E FS RS I + + + AL T ++Q E+ + + ++ Sbjct: 172 SREQIEFFSKRSTGIAAELSARGTSREEAPHALRQGITLANRQQKTQELSRTDLHRQWRD 231 Query: 284 TGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLART 343 IR D A Q+AD++ + Q ++ AI L+ER+ D+L Sbjct: 232 AAAGIRMQFDHAWQQADIQPTKE-LEHRSDLVAQASLNWAIQHLAERESVMPLADLLQNA 290 Query: 344 VGILPPENGVIERARAGIDEAISREQLI-------------------------------- 371 V + I + I + LI Sbjct: 291 VRH-AGGHTDITAIQTAIQSQVDSGTLIREAPHYRSTQDMQSRPMAREGWATEVIRLRGL 349 Query: 372 ----------------PLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVP- 414 L E + + E + A + T+ + Sbjct: 350 PQDTALQLVDQAIAEGRLLMESPRYATRKSFEAESRILAAEQAGRGAWHATISDASAESN 409 Query: 415 ----RTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADR 470 T G +AV ++A D + + G G G+ + M+ + QG + +A Sbjct: 410 LDTHLTPGQREAVMLIATDSDQITGIQGLAG-TGKSFALQNTQMILQRQGHTMAALAPYG 468 Query: 471 RSQMNMKQDERLSGELITGRRQLLEGMAF----TPGSTVIVDQGEKLSLKETLTLLDGAA 526 N+++D + I + F P + V++D+ + +++ LL Sbjct: 469 NMVRNLRED-GIPANTIASVLSASDKRPFIDTLGPKTIVVIDEAGVVPVRQMDKLLALIQ 527 Query: 527 RHNVQVLITDSGQR---TGTGSALMAMKDAGVNTYRWQGGEQRPATIISE---------- 573 +V++ + G A ++++G+ T +++ + + + Sbjct: 528 PTGAKVVLLGDTAQTKAIEAGRAFAMLQESGMKTVLMADIQRQRSERLRQAVQLAAEGQA 587 Query: 574 --------------------------PDRNVRYARLAGDFAASVKAGEESVAQVS-GVRE 606 D + RY +A + A + V+ Sbjct: 588 SQSLPLLDQVLTIPDQFSTDEHGHKNRDSSARYEAIAQAYTRLSAADQAGTIVVTGTNAS 647 Query: 607 QAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVM---EQWNPET 663 + + + + L +G L+ R + Y G ++ + Sbjct: 648 RLAINERTHALLGLEG----KGHRCQLLTRHDTTRAERSVARYYTVGDIVVPERDYQCGL 703 Query: 664 RSHDRYVIDRVTAQSHSLTLRDAQGE---TQVVRISSLDSSWSLFRPEKMPVADGERLRV 720 + + Y + T + + I S S++ + ++ G+R+R+ Sbjct: 704 KRGEMYRVTGSTRHDRLTVESIQSDQSPTQAMEIIPKTMSKLSVYHLSRAELSVGDRVRI 763 Query: 721 TGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGH 780 T + G +VA++ ++T+ GR + + + Sbjct: 764 TRNDAHNDLVNGQLAKVAAIDASSVTIETNGRH----VQLPTDRPLNMDYAYATTVHSAQ 819 Query: 781 SVSDSATVFAS--VTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSE 838 ++ ++ + ++ + ++R + +++ + Sbjct: 820 GLTCDRVIYNAESFSRTTSQDTYYVSISRERHEAIVFTDDAKKLPERVDRLTYKGLARDL 879 Query: 839 QIKTRAGETSLETAISHQKSALHTP 863 Q + + + + Sbjct: 880 QPMVSKHLGHGQNELGPLPQRVESE 904 Score = 291 bits (744), Expect = 2e-76, Method: Composition-based stats. Identities = 155/800 (19%), Positives = 279/800 (34%), Gaps = 107/800 (13%) Query: 729 VSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATV 788 +S + ++ V++ + V + ++L + E S + Sbjct: 128 LSNEEIFKLLRVTDSIYQAELERNVRALGYAV-RHEKSHIELAHISREQIEFFSKRSTGI 186 Query: 789 FASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETS 848 A ++ + + L + +T+ + H + + I+ + Sbjct: 187 AAELSARGTSRE--EAPHALRQGITLANRQQKTQELSRTDLHRQWRDAAAGIRMQFDHAW 244 Query: 849 LETAISHQKSALHT---PAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELG 905 + I K H AQ +++ A+ + ++ + DLL A A T T + Sbjct: 245 QQADIQPTKELEHRSDLVAQASLNWAIQHLAERESVMPLADLLQNAVRHAGGHTDITAIQ 304 Query: 906 GEINAQIKRGDLLYV--------------------------------------------D 921 I +Q+ G L+ + Sbjct: 305 TAIQSQVDSGTLIREAPHYRSTQDMQSRPMAREGWATEVIRLRGLPQDTALQLVDQAIAE 364 Query: 922 VAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGE--LMEKLTSGQRAATRM 979 + +R S+EAE IL G+ A + E L LT GQR A + Sbjct: 365 GRLLMESPRYATRKSFEAESRILAAEQAGRGAWHATISDASAESNLDTHLTPGQREAVML 424 Query: 980 ILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVD 1039 I SD+ T +QG AG GK+ + M+ + + + L P V +R G+ Sbjct: 425 IATDSDQITGIQGLAGTGKSFALQNT----QMILQRQGHTMAALAPYGNMVRNLREDGIP 480 Query: 1040 AQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGD 1099 A T+AS L + +R T+ ++DE+ +V M + ALI G + V GD Sbjct: 481 ANTIASVL--SASDKRPFIDTLGPKTIVVIDEAGVVPVRQMDKLLALIQPTGAKVVLLGD 538 Query: 1100 TDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPE-LREAVYSLINRDVERALSGLESV 1158 T Q +AI G+ F + Q +M +I RQ E LR+AV ++L L+ V Sbjct: 539 TAQTKAIEAGRAFAMLQES-GMKTVLMADIQRQRSERLRQAVQLAAEGQASQSLPLLDQV 597 Query: 1159 KPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTG 1218 L Q + + YEAI + YT Sbjct: 598 ----------------------------LTIPDQFSTDEHGHKNRDSSARYEAIAQAYTR 629 Query: 1219 RTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLS 1278 + + T++VT N R +N H + G+ + Q++ + E Sbjct: 630 LSAADQAGTIVVTGTNASRLAINERTHALLGLEGKGHRCQLL----TRHDTTRAERSVAR 685 Query: 1279 TWETH-------RDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRL--ISPREAVAEGV 1329 + L +R+ G ++ D L + + + Sbjct: 686 YYTVGDIVVPERDYQCGLKRGEMYRVTGSTRHDRLTVESIQSDQSPTQAMEIIPKTMSKL 745 Query: 1330 TLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQ 1389 ++Y + GDR+R T++D V + V A+ SVT+ + ++ + Sbjct: 746 SVYHLSRAELSVGDRVRITRNDAHNDLVNGQLAKVAAIDASSVTIETNGRHVQLPTDRPL 805 Query: 1390 AEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDN 1449 ++D AYA T H AQG + I + ++ YV++SR + V+TD+ Sbjct: 806 ---NMDYAYATTVHSAQGLTCDRVI---YNAESFSRTTSQDTYYVSISRERHEAIVFTDD 859 Query: 1450 RQGWTDAINNAVQKGTAHDV 1469 + + ++ KG A D+ Sbjct: 860 AKKLPERVDRLTYKGLARDL 879 >UniRef50_C0E195 Putative uncharacterized protein n=1 Tax=Corynebacterium matruchotii ATCC 33806 RepID=C0E195_9CORY Length = 1433 Score = 359 bits (920), Expect = 7e-97, Method: Composition-based stats. Identities = 149/1011 (14%), Positives = 287/1011 (28%), Gaps = 154/1011 (15%) Query: 66 LSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKR---LIDAHNQAVDFAVRQVEALAS 122 +++ Q + G+D TFS KSVS++ L K + + H++AV A+ E Sbjct: 170 INKQQSKVRQAAAGFDWTFSPTKSVSVLWALADKKTANKIEECHHKAVQEALSWAEKNVI 229 Query: 123 TRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH-NGEWKTLSSDKVG 181 + + V T L+ A F H +R +P LH+H +V+N Q +G W TL S Sbjct: 230 YTRIGTNGIQQVTTQGLIAAEFTHFDTRTGDPDLHSHVLVSNKVQAPDGRWLTLDS---- 285 Query: 182 KTGFIENVYANQIAFGRLYREKLKEQV-EALGYETEVVGKHG----MWEMPGVP---VEA 233 + V+ N + Y L E + +G E + G +WE+ GVP + Sbjct: 286 -----QEVFRNAQSISARYDTALMEILSREMGLTFEPSQREGESTPVWEIAGVPQYLISL 340 Query: 234 FSGRSQTIR---------------EAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWM 278 FS R + R + + +K + A L TR +K+ ++ E Sbjct: 341 FSSRREQARPVFDQLVADYSKQHDKQPDKITKIKLWEKAILQTRDAKKPAQSLGQLRENW 400 Query: 279 QTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQ----AIAGLSERKVQF 334 + + DG Q++V Q A+A ++ ++ F Sbjct: 401 AIRVQGLDHGDELLQQIQEVVANPEGDQRQVFGDGKKWQESVEQVAEIALANVTSKRGVF 460 Query: 335 TYTDVL------------ARTVGILPPENGVIERARAGIDEAISREQLIPLDRE------ 376 V + E +++ ++S +++ L Sbjct: 461 GDHHVRTAVFTELKGWKFHNAAELAKAETQIVDYILEQKVVSLSPGEVLDLPSRLLGDNA 520 Query: 377 --------KGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVP---------RTAGY 419 + +T+ + E V + +K++ G Sbjct: 521 LGVDRRVGRNRYTTQEILNAEQLVLDSCTEPTPYTAPNRDIDKALAGHEKAHGWTLNEGQ 580 Query: 420 SDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQD 479 L ++ G G G+ + + + + QGR V +A ++ + ++ Sbjct: 581 EAMARSLLTTGALVSCGVGPAG-TGKTTSMQIVSKVWKNQGRNVIGLAPSAQAASVLGEE 639 Query: 480 ERLSGELITGRRQLLEGM--------------AFTPGSTVIVDQGEKLSLKETLTLLDGA 525 I G PG ++VD+ S + L++ A Sbjct: 640 IGCEATTIDKLTFTWRGQHSKLPGHDLDALEIKIQPGDMLLVDEAGMASTQNLAALVEIA 699 Query: 526 ARHNVQVLITDSGQRTGTGSALMAMKDA-GVNTYRWQGGEQR------------------ 566 V + + + A + R Sbjct: 700 KESGAVVRMIGDPHQLSAVGSGGLFNSACQITDAVELTEVMRFSGGKDTEQADASLKIRK 759 Query: 567 ----------PATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRS 616 +S R D+ + G +S+ S + + Q +R+ Sbjct: 760 GDKSGLDVYEQREWVSGGTRQDMVDSAVADYLNDIARGRKSLIVASTNADVDRMNQQVRA 819 Query: 617 ELKTQGVLGLPEVTMTALSPVWLDSR---SRYLRDMYRPGMVMEQWNPETRSHDRYVIDR 673 + G + V +R + YR + + + + Sbjct: 820 YRISIGEVDDKHHMRVGRGDVIGVGDIVITRQNKQFYRKVQGKNTVIGKVMNGQLFTVVG 879 Query: 674 VTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGD 733 + G+ QV+ + L + A G + V + V Sbjct: 880 LQRDGDVEVKDLKTGKRQVIPADYAAENMHLGYAATVHRAQGATVDVCRAVVDQAV---- 935 Query: 734 RLQVASVSEDAMTVVVPGRAEPATLP-VSDSPFTALKLENGWVETPG-HSVSDSATVFAS 791 + V + + V+++ F + + V Sbjct: 936 -------DRAGLYVALSRGKKENRAYCVTEADFDFDAEDMHYHMGGHDDGELTPRKVLEQ 988 Query: 792 V---------TQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKT 842 + ++R D R+A S Sbjct: 989 ALAKDNRSRSATEIAQQELADSMSRDRVQALYVHGCDLARSALAEHVRTSLVDALPN--- 1045 Query: 843 RAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFT 902 G + A +AL + I + ++ K FS D+ E S Sbjct: 1046 --GVSLDADATWRIDTALKRVIENGIDVQNLTLDELKPDFSADDMGAEIASCINRQYNQE 1103 Query: 903 ELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEA 953 + + I RG L D A+ + R + ++ R G A Sbjct: 1104 AVISAVRDNIVRG--LPDDTAQKLASE---DRGVAHIDAALARMADAGVHA 1149 Score = 176 bits (445), Expect = 9e-42, Method: Composition-based stats. Identities = 107/830 (12%), Positives = 215/830 (25%), Gaps = 133/830 (16%) Query: 871 ALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGL 930 + +LA + ++ E+ + + L V + G Sbjct: 475 GWKFHNAAELAKAETQIVDYILEQKVVSLSPGEVLDLPSRLLGDNAL---GVDRRVGRNR 531 Query: 931 LVSRASYEAEKSILRHILEG------KEAVMPLMERVPGELMEKLTSGQRAATRMILETS 984 ++ AE+ +L E + + L GQ A R +L T Sbjct: 532 YTTQEILNAEQLVLDSCTEPTPYTAPNRDIDKALAGHEKAHGWTLNEGQEAMARSLLTTG 591 Query: 985 DRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM-RSAGVDAQTL 1043 + G AG GKTT V+ + +++ V+GL P+ +A + G +A T+ Sbjct: 592 ALVSCGVGPAGTGKTTSM----QIVSKVWKNQGRNVIGLAPSAQAASVLGEEIGCEATTI 647 Query: 1044 ASFLHDTQLQQRSGETPDF--------SNTLFLLDESSMVGNTDMARAYALIAAGGGRAV 1095 + Q D + L+DE+ M ++A + G Sbjct: 648 DKLTFTWRGQHSKLPGHDLDALEIKIQPGDMLLVDEAGMASTQNLAALVEIAKESGAVVR 707 Query: 1096 ASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGL 1155 GD QL A+ G F D + E++R + Sbjct: 708 MIGDPHQLSAVGSGGLFNSACQ--ITDAVELTEVMRFSG--------------------- 744 Query: 1156 ESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRD 1215 + + S + + ++ V D Sbjct: 745 ---------------GKDTEQADASLKIRKGDKSGLDVYEQREWVSGGTRQDMVDSAVAD 789 Query: 1216 YTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLN---TANIRDG 1272 Y R+ IV N D +N + R GE+ + M Sbjct: 790 YLNDIARGRKSL-IVASTNADVDRMNQQVRAYRISIGEVDDKHHMRVGRGDVIGVGDIVI 848 Query: 1273 ELRRLSTWETHRDAL----VLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEG 1328 + + + +++ + G+ + DG + ++D + R + P + AE Sbjct: 849 TRQNKQFYRKVQGKNTVIGKVMNGQLFTVVGLQR-DGDVEVKDLKTGKRQVIPADYAAEN 907 Query: 1329 VTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQE 1388 + L T+ G + ++ ++ ++ + Sbjct: 908 MHLGYAATVHRAQGATVDVCRAVVDQAVDRAGLYVALSRGKKENR--------------- 952 Query: 1389 QAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTD 1448 AY +T F E + E Sbjct: 953 --------AYCVT-------EADFDFDAEDMHYHMGGHDDGEL----------------T 981 Query: 1449 NRQGWTDAINNAVQKGTAHDVFEPKPDREVMN----------------AERLFSTARELR 1492 R+ A+ + +A ++ + + + A + Sbjct: 982 PRKVLEQALAKDNRSRSATEIAQQELADSMSRDRVQALYVHGCDLARSALAEHVRTSLVD 1041 Query: 1493 DVAAGRAVLRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGN 1552 + G ++ A + R I G + D + G + N Sbjct: 1042 ALPNGVSLDADATWRIDTALKRVIENGIDVQNLTLDELKPDFSADDMGAEIASCINRQYN 1101 Query: 1553 GLRGFSGEGRVKGSGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIAGEGR 1612 R Q + E ++ + D ++ + Sbjct: 1102 Q-EAVISAVRDNIVRGLPDDTAQKLAS-EDRGVAHIDAALARMADAGVHADMIIPLLCEQ 1159 Query: 1613 PWNPGAITGGRVWGDIPDNSVQPGAGNGEPVTAEVLAQRQAEEAIRRETE 1662 W+ G + I D + + P A V + +R E Sbjct: 1160 DWDAAGSVGEAIATRIDDYAADAASTIPSPPPAWVGEDTELATWLRETYE 1209 >UniRef50_C5A9A9 Putative ATP-dependent exoDNAse (Exonuclease V) alpha subunit n=1 Tax=Burkholderia glumae BGR1 RepID=C5A9A9_BURGB Length = 1131 Score = 354 bits (908), Expect = 2e-95, Method: Composition-based stats. Identities = 173/1124 (15%), Positives = 345/1124 (30%), Gaps = 156/1124 (13%) Query: 1 MMSIAQV------RSAGSAGNYYTDKDN-YYVLG-----SMGERWAGRGAEQLGLQGSVD 48 M+++ + ++ + NY+ K+ YYV W G+GAE LGL+G V Sbjct: 1 MLTMIALSPKGHDKNGNNIINYFLAKEARYYVNEVTGKIENQTTWMGKGAEALGLKGEVS 60 Query: 49 KDVFTRLLEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGD-----KRLI 103 ++V LL G+LPDGA G R +D+ +A K+VSM+ + + +I Sbjct: 61 EEVLLNLLNGKLPDGAK-GVQNVGRGGRRAAFDMCATAEKTVSMLMADPTNTPEEREAII 119 Query: 104 DAHNQAVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVA 163 AH +A ++ VE+ RV G +E V ++ A H ++RD +P LH+H +V Sbjct: 120 QAHKRAARMMIKFVESELYARVGAQG-NEIVRNVGMIAAEVTHYSNRDLDPNLHSHYIVM 178 Query: 164 NVTQHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYET-------- 215 N+ G + T + A + A G +YR +L +++ LG++ Sbjct: 179 NMVHSIGP----DGKERVTTFENSTLMAIKHAAGAIYRNQLAHEIQELGFQVNKHIQLNA 234 Query: 216 -EVVGKHGMWEMPGVPVE---AFSGRSQTIREAVGEDASLKSRDVAALDTRKSKQHVDPE 271 + + G+ E A S R I + + D AA TRK K + Sbjct: 235 KGRETGDVFFRVAGIDEESRNAHSKRRMDILAYMEAHPEVTE-DQAAERTRKDKDEPSIQ 293 Query: 272 IKMAEWMQTLKETGF-DIRAYRDAADQRADLRTLTPGPASQDGPDVQQ--------AVTQ 322 W + +E + AY+ A + G + Q+ + + Sbjct: 294 ELREIWKREFEERRQRNPNAYQSVAALKNPEVVSNLGHKDMEPVKGQEKQQDMTPKSDDE 353 Query: 323 AIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREK----G 378 + + FT +++ + + ++++ + + Sbjct: 354 ILKTVHVASSLFTRYELMKQVAFEYVGRLDMRGVLEKTNAILDDAKRVLAFEHDPKTGVA 413 Query: 379 LFTSGIHVLDELSVRALSRDIMKQNRVTVHPEK-------------SVPRTAGYSDAVSV 425 + S V E + + + + + E+ + A +V Sbjct: 414 RYASQAMVDLEAGIIKKAAARADEQSIRLTKEQVDAGLAKFQQKNPHLKLNAEQEGSVRY 473 Query: 426 LAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSG- 484 + D AI+SG+ G G+ + E G ++ ++ ++ ++ + + Sbjct: 474 ICSDTGGCAIISGRAG-TGKTTSFIATKITWEEAGGKLIGVSESWKAAKKLQSESGVESY 532 Query: 485 ---ELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSG--- 538 + + + + +I+D+ + + + D + ++++ Sbjct: 533 STRTTLHRIKN--GKLPLDSKTMLIIDEAGMQTSQSIAEMQDLCDKAGAKLVLMGDHLQL 590 Query: 539 QRTGTGSALMAMK----DAGVNTYRWQGGEQRPATIISEPDRNVRY-------------- 580 Q G GS M+ D + R Q E+ T D Sbjct: 591 QPVGAGSGFRIMQARIKDHALKEIRRQREERDRVTANMLYDERDGQKIFERYLANGHIRT 650 Query: 581 --------ARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSEL------KTQGVLGL 626 A L D+ + GE ++ E + ++R ++ K G+ Sbjct: 651 SETELEARAALVRDYFKTEGQGEPETVKLMVGGELREVDMSVRDKVVFSAGDKALGIHAN 710 Query: 627 PEVTMTA----------LSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTA 676 + A L V + + + + VI Sbjct: 711 DIGVVKAMELNENGEGFLIEVEVTPADLNQKKHTVSIDTSQFNDFNRDYAQTIVICGTNR 770 Query: 677 QSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMP--VADGERLRVTGKIPGLRVSGGDR 734 + + +G + + + E VA G+++ T K L VS G+ Sbjct: 771 EVQQMNEDIRKGFKERGLLGEDQRVRLIVNDEWRQEIVATGDKVLFTEKHDDLGVSNGEG 830 Query: 735 LQVASVSEDA-------MTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSAT 787 + + +V E VS + + T S S Sbjct: 831 GVITQLRPSDDKQSHIMTIRLVSEIPEQNGRYVSFDTKDCPDVMLAYAGTVHKSQGQSID 890 Query: 788 VF-----ASVTQMAMDNATLNGLARSGRDVRLYSSLDE----------------TRTAEK 826 + M + + L + R + +Y ++ E+ Sbjct: 891 KVLHFVGPAGLHMVNNQSALVAMTRMKTEYGVYGLDEDLLGRIDEDGTRRGGIAQALTEQ 950 Query: 827 LARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVD 886 + V + + S + + PA LA E ++ A Sbjct: 951 ALNVTTMDVKQITREAAKEIRPQQRGASRRLEPIKIPAHLEAELATSRTEERE-ALKARG 1009 Query: 887 LLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLL-----------VSRA 935 + A+S A R + + +RA Sbjct: 1010 IAQAAESEEASRRRLAGDPQHAADLRARAAVNEREATAAQAQSGFVASMTQLNARKAARA 1069 Query: 936 SYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRM 979 +YEA + + + A + L Q+ Sbjct: 1070 AYEARQKAEAQAVAKRAAEQAAQQAATRALPPTPAQEQQRKLEA 1113 Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 123/818 (15%), Positives = 247/818 (30%), Gaps = 83/818 (10%) Query: 815 YSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPV 874 + ++ + + + + + ++ L Sbjct: 298 IWKREFEERRQRNPNAYQSVAALKNPEVVSNLGHKDMEPVKGQEKQQDMTPKSDDEILKT 357 Query: 875 VESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYV-DVAKGYGTGLLVS 933 V F+ +L+ + + + NA + + + G S Sbjct: 358 VHVASSLFTRYELMKQVAFEYVGRLDMRGVLEKTNAILDDAKRVLAFEHDPKTGVARYAS 417 Query: 934 RASYEAEKSILRHILEGKEAVMPLMERVPGELME----------KLTSGQRAATRMILET 983 +A + E I++ + + + + KL + Q + R I Sbjct: 418 QAMVDLEAGIIKKAAARADEQSIRLTKEQVDAGLAKFQQKNPHLKLNAEQEGSVRYICSD 477 Query: 984 SDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMR-SAGVDAQ- 1041 + ++ G AG GKTT F A + E +++G+ + +A +++ +GV++ Sbjct: 478 TGGCAIISGRAGTGKTTSFI----ATKITWEEAGGKLIGVSESWKAAKKLQSESGVESYS 533 Query: 1042 ---TLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASG 1098 TL ++G+ P S T+ ++DE+ M + +A L G + V G Sbjct: 534 TRTTLHR--------IKNGKLPLDSKTMLIIDEAGMQTSQSIAEMQDLCDKAGAKLVLMG 585 Query: 1099 DTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESV 1158 D QLQ + G FR+ Q R +KEI RQ E +++ + + + Sbjct: 586 DHLQLQPVGAGSGFRIMQAR--IKDHALKEIRRQREERDRVTANMLYDERDGQKIFERYL 643 Query: 1159 KPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTG 1218 + E ++ E + K M+ GE Sbjct: 644 ANGHIRTSETELEARAALVRDYFKTEGQGEPETVKLMVGGELREVDM------------- 690 Query: 1219 RTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLS 1278 R++ + N + + E G+ ++ + A++ + Sbjct: 691 ---SVRDKVVFSAGDKALGIHANDIGVVKAMELNENGEGFLIEVEVTPADLNQKKHTVSI 747 Query: 1279 TWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISP----REAVAEGVTLYTP 1334 D + Y + I + + + + + + Sbjct: 748 DTSQFNDF----NRDYAQTIVICGTNREVQQMNEDIRKGFKERGLLGEDQRVRLIVNDEW 803 Query: 1335 DTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHI 1394 V TGD++ FT+ + G +T + S R + EQ +++ Sbjct: 804 RQEIVATGDKVLFTEKHDDLGVSNGEGGVITQLRPSDDKQSHIMTIRLVSEIPEQNGRYV 863 Query: 1395 D----------LAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQ 1444 LAYA T H +QG S + G G M +SA VA++RMK Sbjct: 864 SFDTKDCPDVMLAYAGTVHKSQGQSIDKVLHFVGPAGLH--MVNNQSALVAMTRMKTEYG 921 Query: 1445 VYTDNRQGW-------------TDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTAREL 1491 VY + A+ T DV + + + +R L Sbjct: 922 VYGLDEDLLGRIDEDGTRRGGIAQALTEQALNVTTMDVKQITREAAKEIRPQQRGASRRL 981 Query: 1492 RDVAAGRAVLRQAGLAGGD----SPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLT 1547 + + + + + AR IA + + A D + + Sbjct: 982 EPIKIPAHLEAELATSRTEEREALKARGIAQAAESEEASRRRLAGDPQHAADLRARAAVN 1041 Query: 1548 TDDGNGLRGFSGEGRVKGSGDAQFVALQGSRNGESLLA 1585 + + SG +A+ A + A Sbjct: 1042 EREATAAQAQSGFVASMTQLNARKAARAAYEARQKAEA 1079 >UniRef50_D0YT16 DNA primase catalytic core n=1 Tax=Mobiluncus mulieris 28-1 RepID=D0YT16_9ACTO Length = 1125 Score = 353 bits (904), Expect = 5e-95, Method: Composition-based stats. Identities = 124/806 (15%), Positives = 246/806 (30%), Gaps = 106/806 (13%) Query: 64 ADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKR---LIDAHNQAVDFAVRQVEAL 120 + + ++ +R G+DLTF+ K +S++ L + + H +A++ + +E Sbjct: 125 QQVEKSKEKQSRAVHGFDLTFAPSKDISVLWALSDEDTRAVMEQCHREAIEQTLAMLEDK 184 Query: 121 ASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ-HNGEWKTLSSDK 179 A G E V TG L+ A F+H +R+ +P LHTH VV N Q +G+W+T+ S Sbjct: 185 ALFTRRGKGGVEQVKTGGLIAAGFDHWDTREGDPHLHTHVVVVNRVQGPDGKWRTIDSR- 243 Query: 180 VGKTGFIENVYANQIAFGRLYREKLKEQV-EALGYETEVVGK----HGMWEMPGVPVE-- 232 + + Y + +++ E LG++ V +W + G+ + Sbjct: 244 -------HGLMPAVVGLSEAYDSAIMDRLTERLGFDWTEVSTTVSGKPVWGINGLNRDLV 296 Query: 233 -AFSGRSQTIREAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAY 291 FS R I G+ A+ + A DTRK K H +W + A+ Sbjct: 297 KEFSTRRGQILRERGDGATREDDKKAWSDTRKDKHHHQLGELTRQWRERALRILGKNPAF 356 Query: 292 RDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPEN 351 + + + I L + + + ++ A +L Sbjct: 357 TPIQATATGV------------ASIDEIAVMVIDNLQKERATWGIWNMQAEAHRLLRKYR 404 Query: 352 GVIERARAGIDEAISREQLIPLDREKG----------------------LFTSGIHVLDE 389 ++ +A +D+ + + + + + G +T+ + E Sbjct: 405 YHYDQRQAVVDQVVDKARELTVQITGGDTRPVTETFQQENTAPAVSAADRYTTRRILDAE 464 Query: 390 LSVR---------ALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQG 440 + AL D Q E + A + ++ I+ G Sbjct: 465 RLLLNGNDSPQGPALQYDQANQALEAWVSEDGFKLDSEQIGAAFEIVTSGRAVDILVGPA 524 Query: 441 GAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFT 500 G AG+ ++ LV + G V A + + + I ++ AF Sbjct: 525 G-AGKTTTLSALVAAWKTAGVPVAGFAPSAAAAKVLAEATG-QAATIASW--TVKPQAFQ 580 Query: 501 PGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGT---GSALMAMKDAGVNT 557 PG VIVD+ + + L ++L+ + G A + T Sbjct: 581 PGQLVIVDEAAMSATLDLAALAQATREAGAKLLLVGDHHQLSAVEAGGAFSMLVRHNTTT 640 Query: 558 YRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSE 617 R + S+ G +E A++ Sbjct: 641 IR-------DGDTGRVITQKTPPTLEGVRRFRQPWEAGASLLLREGKKE------AVKDY 687 Query: 618 LKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQ 677 L + G + + A + + Y G + Sbjct: 688 LLNDRIKGGGDTSQVAQA------ILKAWWADYTAGKTS---------------LMLAHD 726 Query: 678 SHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQV 737 + S+ + +++ +D+S G+ + L V G V Sbjct: 727 NTSVNTLNEGARELMIQAGIVDTSKETTLRGDQAAGAGDTIVTRLNDKTLGVINGQVFTV 786 Query: 738 ASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAM 797 ++ D + LP ++ ++L + TV VT+ Sbjct: 787 TRINRDGGIDARDQQGFTHRLP-AEYVKKNVELGYAGTVHRAQGRTVD-TVHTMVTETMT 844 Query: 798 DNATLNGLARSGRDVRLYSSLDETRT 823 + R + + Sbjct: 845 RQQLYVAMTRGRANNTAWCVTQAPDI 870 Score = 154 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 136/887 (15%), Positives = 245/887 (27%), Gaps = 106/887 (11%) Query: 790 ASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSL 849 S T+ + L L R R+ L A + E Sbjct: 323 WSDTRKDKHHHQLGELTRQWRERALRILGKNPAFTPIQATATGVASIDEIAVMVIDNLQK 382 Query: 850 ETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEIN 909 E A + A + + + ++ D + + + Sbjct: 383 ERATWGIWNM-QAEAHRLLRKYRYHYDQRQAVV---DQVVDKARELTVQITGGDTRPVTE 438 Query: 910 AQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKE------AVMPLMERVPG 963 + +R +AE+ +L + +E Sbjct: 439 TFQQEN-----TAPAVSAADRYTTRRILDAERLLLNGNDSPQGPALQYDQANQALEAWVS 493 Query: 964 ELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNML-------PESE 1016 E KL S Q A I+ + ++ G AG GKTT A+++A S Sbjct: 494 EDGFKLDSEQIGAAFEIVTSGRAVDILVGPAGAGKTTTLSALVAAWKTAGVPVAGFAPSA 553 Query: 1017 RPRVVGLGPTHRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVG 1076 V T +A T+AS+ Q Q L ++DE++M Sbjct: 554 AAAKVLAEATGQAA-----------TIASWTVKPQAFQ--------PGQLVIVDEAAMSA 594 Query: 1077 NTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPEL 1136 D+A G + + GD QL A+ G F + Sbjct: 595 TLDLAALAQATREAGAKLLLVGDHHQLSAVEAGGAFSMLVRH------------------ 636 Query: 1137 REAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAML 1196 ++ + D R ++ V R W S+ +EA + Sbjct: 637 --NTTTIRDGDTGRVITQKTPPTLEGVRRFRQPWEAGASLLLREGKKEAVKDYLLNDRIK 694 Query: 1197 KGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGK 1256 G V + +A DYT + +L++ H N LN ++ +AG + Sbjct: 695 GGGDTSQVAQAILKAWWADYTA-----GKTSLMLAHDNTSVNTLNEGARELMIQAGIVDT 749 Query: 1257 EQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNT 1316 + + A + L +++ + I++ DG I +D +G Sbjct: 750 SKETTLRGDQA----AGAGDTIVTRLNDKTLGVINGQVFTVTRINR-DGGIDARDQQG-F 803 Query: 1317 RLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSD 1376 P E V + V L T+ G + + ++ + T Sbjct: 804 THRLPAEYVKKNVELGYAGTVHRAQGRTVDTVHTMVTETMTRQQLYVAMTRGRANNTAWC 863 Query: 1377 GQQTREIRPGQEQAEQHID--LAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESA-- 1432 Q +I +D A A ++ G ++ +E T+ + + Sbjct: 864 VTQAPDIDGNPTGQLDTLDVFTAVATSS----GGEKSATEIMELTQNENQGKSYRILLGE 919 Query: 1433 Y---VALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTAR 1489 Y A+ R K + V+K T + E + TA Sbjct: 920 YEKMCAIERAKYWAKTIAP-----AGVSPENVRKLTGI----------LTTPEWTWRTAA 964 Query: 1490 ELRDVAAGRAVLRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTD 1549 + V GR GG++P +I P P + L + Sbjct: 965 MDQAVTEGRKPEELVPRKGGETPQEWIRRLDALPPAPGVSPIPQECSEPDRQVLATRRQE 1024 Query: 1550 DGNGLRGFSGEGRVKGSGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIAG 1609 G+ + A + A G R S + +++ +G Sbjct: 1025 LGDRKTKAYTDA-----ISAPWWANTGGRAPISQHPAWQRAMMQVIEWRLAAG--WENPN 1077 Query: 1610 EGRPWNPGAITGGRVWGD-IPDNSVQPGAGNGEPVTAEVLAQRQAEE 1655 + P + + AG G+P +Q E Sbjct: 1078 QALPHASTQPGYLQATQALATAKRLNEMAGGGQPTMVPTTSQTTGLE 1124 Score = 95.8 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 96/643 (14%), Positives = 178/643 (27%), Gaps = 41/643 (6%) Query: 1075 VGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTP 1134 + + + A+ ++ +G + G G+ L +A A + Sbjct: 499 LDSEQIGAAFEIVTSGRAVDILVG------PAGAGKTTTLSALVAAWKTAGVPVAGFAPS 552 Query: 1135 ELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKA 1194 V + S + Q + S T + EA K Sbjct: 553 AAAAKVLAEATGQAATIASWTVKPQAFQPGQLVIVDEAAMSATLDLAALAQATREAGAKL 612 Query: 1195 MLKGEAFPDVPMTLYEA--IVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAG 1252 +L G+ + A ++ + T + ++T E Sbjct: 613 LLVGDHHQLSAVEAGGAFSMLVRHNTTTIRDGDTGRVITQKTPPTLEGVRRFRQPWEAGA 672 Query: 1253 ELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVY--HRIAGISKDDGLITLQ 1310 L + + + D T + + L Y + + + D Sbjct: 673 SLLLREGKKEAVKDYLLNDRIKGGGDTSQVAQAILKAWWADYTAGKTSLMLAHDNTSVNT 732 Query: 1311 DAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGD 1370 EG L+ V G GD + +D+ G + V+TVT ++ D Sbjct: 733 LNEGARELMIQAGIVDTSKETTLRGDQAAGAGDTIVTRLNDKTLGVINGQVFTVTRINRD 792 Query: 1371 SVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFE 1430 + QQ R E +++++L YA T H AQG + + + Sbjct: 793 GGIDARDQQGFTHRLPAEYVKKNVELGYAGTVHRAQGRTVDTVHTMVTETM------TRQ 846 Query: 1431 SAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARE 1490 YVA++R + + + + D N + DVF V + +A E Sbjct: 847 QLYVAMTRGRANNTAWCVTQAPDID--GNPTGQLDTLDVFTA-----VATSSGGEKSATE 899 Query: 1491 LRDVAAGRAVLRQAGLAGGDSPARFIAPGRKYPQPYVALP--AFDRNGKSAGIWLNPLTT 1548 + ++ + + G+ KY +A + + K GI P T Sbjct: 900 IMELTQNENQGKSYRILLGEYEKMCAIERAKYWAKTIAPAGVSPENVRKLTGILTTPEWT 959 Query: 1549 DDGNGLRGFSGEGRVKGSGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIA 1608 + EGR V +G + + R+ P GV Sbjct: 960 WRTAAMDQAVTEGRKPEE----LVPRKGGETPQEWI-------RRLDALPPAPGVSPIPQ 1008 Query: 1609 GEGRPWNPGAITGGRVWGDIPDNSVQPG--AGNGEPVTAEVLAQRQAE--EAIRRETERR 1664 P T + GD + A + A+ + E R Sbjct: 1009 ECSEPDRQVLATRRQELGDRKTKAYTDAISAPWWANTGGRAPISQHPAWQRAMMQVIEWR 1068 Query: 1665 ADEIVRKMAENKPDLPDGKTE-QAVREIAGQERDRAAITEREA 1706 + P QA + +A +R + Sbjct: 1069 LAAGWENPNQALPHASTQPGYLQATQALATAKRLNEMAGGGQP 1111 >UniRef50_C6DZ94 Conjugative relaxase domain protein n=1 Tax=Geobacter sp. M21 RepID=C6DZ94_GEOSM Length = 1351 Score = 352 bits (902), Expect = 9e-95, Method: Composition-based stats. Identities = 166/974 (17%), Positives = 312/974 (32%), Gaps = 202/974 (20%) Query: 1 MMSIAQVR-SAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGR 59 M+S++ +A AG Y+ ++YY+ G RW G+ +L L G V ++ F L G+ Sbjct: 1 MLSLSNGGMTASQAGKYFA-AEDYYLKGGESSRWLGKTTAELKLAGKVGEEEFRNLCAGK 59 Query: 60 LPDGADLS-------RMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDF 112 PDGA + + HR G DLTFSAPKS+S+ G+ L + +QAV+ Sbjct: 60 TPDGAAQLVAPKVVRKEGEPQELHRAGNDLTFSAPKSLSIGYA-AGNHELKEIWDQAVEN 118 Query: 113 AVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ-HNGE 171 +R VE S G GNL+ A F+H TSR +P +H+H + N+ +G Sbjct: 119 TMRYVEEHYSQYRTPHGIR---NAGNLLAAKFDHVTSRALDPDVHSHVFLLNMVHTPDGR 175 Query: 172 WKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHG-MWEMPGVP 230 W +++Y ++I+ G L R++ + GY+ + ++E+ GV Sbjct: 176 WLA---------NEPKSIYQDKISIGMLARQESICLLRQAGYQVYFTDREKFLFEIEGVS 226 Query: 231 VEA---FSGRSQTIREAVGED---------ASLKSRDVAALDTRKSKQHVDPEIKMAEWM 278 E FS R I E V E + + AA TR K + + +W Sbjct: 227 PEEIEFFSKRGAAIEEQVAEWQQEGKYPGVSETLLKQWAAFGTRDHKLKITIQEIRQKWD 286 Query: 279 QTLKETGFDIRAYRDAADQ--------------RADLRTLTPGPASQDGPDVQQAVTQAI 324 Q E G + R+ + + + + LTP + ++ + A Sbjct: 287 QWFVEVGGTAQEVRERIEATKQLGQEADAGNSGKTESQPLTPTHSFPPEKTAREVLKDAS 346 Query: 325 AGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDR----EKGLF 380 + L++++V F ++ V I E+ I + + E L R + F Sbjct: 347 SFLTDKEVIFDRAQLIKTAVRISGGEH-DIRQIENALKEKREVHFLGQEPRGPQAGREFF 405 Query: 381 TSGIHVLDELSVRALSRDIMKQNRVTVHPEKS---------------------------- 412 T+ + E + VT + E Sbjct: 406 TTREMLKLEARNVEALEYLGAFAPVTSNSEVEAYLKGLAGAGEGTLTREEASFTEAFEAG 465 Query: 413 ---------VPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELV----MMAREQ 459 + T G + V + G G G+ + + + Sbjct: 466 AASAAPTGFLNLTPGQREYVLNELAGDKGFTVTQGDPG-TGKTFAAGVVERFNDEVLQPS 524 Query: 460 GREVQI--IAADRRSQMNMKQDERLSGELITGRRQL------------LEGMAFTPGSTV 505 GR +A ++ + M+Q + +E A Sbjct: 525 GRAHHTLNLAYTGKAALEMEQASGKEAFTVDSFLNRYRKSPDLSAFPGMERPAPRGAQVA 584 Query: 506 I-VDQGEKLSLKETLTLLDGAAR-----HNVQVLITDSGQRTGTGSA------------- 546 + +D+ + ++ LL V++ + ++ + A Sbjct: 585 LKLDEASFVGGRQAEHLLRVVQDLKSKGVQVKLSMIGDTKQLQSIQASPFFSHASELARQ 644 Query: 547 ----LMAM------KDAGVNTYRW------------------QGGEQRPATIISEPDRNV 578 M KDAG+ ++ + P + Sbjct: 645 ELGDFALMKEITRQKDAGLLDVAESLNLEGEQRLLGKNATDALKLLEQQGRVREIPTYDA 704 Query: 579 RYARLAGDF------------AASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGL 626 + AA+ + + ++ L IR+ +G LG Sbjct: 705 LMQAAVECYVEEAAKPSRDPAAAAAGEKQSVLIVTPLNADRQELNAKIRATKMEKGELG- 763 Query: 627 PEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSH-----------DRYVIDRVT 675 V + PV Y PGM + + + + V Sbjct: 764 QGVAVQVYVPV----EQGVTASSYHPGMNIVFTGKRAKDGAMEVPEGVALNQQGEVLSVD 819 Query: 676 AQSHSLTLRDAQGE----TQVVRISSLDSSWSLFRPEKMPVADGERLRVT---------- 721 + + + T+ S L + +L+R E+ A G+ + Sbjct: 820 PVRNRVAVVFQGDRGGTTTKTFEASGLANKSALYRVEEREFAAGDIVVCNKTTFDRSTVS 879 Query: 722 -GKIPGLRVSGGDRLQVASVS-EDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPG 779 +++ G+R + ++ + +V + + V+ F +E+G+ T Sbjct: 880 ARSGKTIKLRNGERGVIEAMEAAEKGSVALIRFPGDRVVKVNLDRFGPQHIEHGYAVTAH 939 Query: 780 HSVSDSATVFASVT 793 + ++ S Sbjct: 940 KAEGETVDSVISFN 953 Score = 189 bits (478), Expect = 1e-45, Method: Composition-based stats. Identities = 130/718 (18%), Positives = 212/718 (29%), Gaps = 100/718 (13%) Query: 779 GHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSE 838 G S T+ + L + R ++ TA+++ T Sbjct: 251 GKYPGVSETLLKQWAAFGTRDHKLKITIQEIRQKWDQWFVEVGGTAQEVRERIEATKQLG 310 Query: 839 QIKT--RAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAA 896 Q +G+T + A++ + A + K++ F L+ A + Sbjct: 311 QEADAGNSGKTESQPLTPTHSFPPEKTAREVLKDASSFLTDKEVIFDRAQLIKTAVRISG 370 Query: 897 EGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKS-------------- 942 ++ + + + L G +R + E Sbjct: 371 GEHDIRQIENALKEKREVHFLGQEPRGPQAGREFFTTREMLKLEARNVEALEYLGAFAPV 430 Query: 943 -----ILRHILEGKEAVMPLMERVPGELME---------------KLTSGQRAATRMILE 982 + ++ A + R E LT GQR L Sbjct: 431 TSNSEVEAYLKGLAGAGEGTLTREEASFTEAFEAGAASAAPTGFLNLTPGQREYVLNELA 490 Query: 983 TSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESER--PRVVGLGPTHRAVGEMRSA-GVD 1039 FTV QG G GKT V + + + + L T +A EM A G + Sbjct: 491 GDKGFTVTQGDPGTGKTFAAGVVERFNDEVLQPSGRAHHTLNLAYTGKAALEMEQASGKE 550 Query: 1040 AQTLASFLHDTQL------QQRSGETPDFSNTL-FLLDESSMVGNTDMARAYALIAA--- 1089 A T+ SFL+ + + LDE+S VG ++ Sbjct: 551 AFTVDSFLNRYRKSPDLSAFPGMERPAPRGAQVALKLDEASFVGGRQAEHLLRVVQDLKS 610 Query: 1090 --GGGRAVASGDTDQLQAIAPGQPF---RLQQTRSAADVAIMKEIVRQTPELREAVYSLI 1144 + GDT QLQ+I F + D A+MKEI RQ V + Sbjct: 611 KGVQVKLSMIGDTKQLQSIQASPFFSHASELARQELGDFALMKEITRQKDAGLLDVAESL 670 Query: 1145 NRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDV 1204 N + E+ L G + ++ Q+G + + E K Sbjct: 671 NLEGEQRLLGKNATDALKLLEQQGRVREIPTYDALMQAAVECYVEEAAKPS--------- 721 Query: 1205 PMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKE---QVMV 1261 RD ++ LIVT LN DR+ LN+ I + + GELG+ QV V Sbjct: 722 ---------RDPAAAAAGEKQSVLIVTPLNADRQELNAKIRATKMEKGELGQGVAVQVYV 772 Query: 1262 PVLNTANIR----------DGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQD 1311 PV G+ + E + + + ++ D Sbjct: 773 PVEQGVTASSYHPGMNIVFTGKRAKDGAMEVPEGVALNQQGEVLSVDPVRNRVAVVFQGD 832 Query: 1312 AEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERG-----------YVANS 1360 G T +A LY + GD + K+ +R Sbjct: 833 RGGTTTKTFEASGLANKSALYRVEEREFAAGDIVVCNKTTFDRSTVSARSGKTIKLRNGE 892 Query: 1361 VWTVTAVS----GDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAI 1414 + A+ G + QHI+ YA+TAH A+G + I Sbjct: 893 RGVIEAMEAAEKGSVALIRFPGDRVVKVNLDRFGPQHIEHGYAVTAHKAEGETVDSVI 950 Score = 43.8 bits (101), Expect = 0.061, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 37/116 (31%), Gaps = 2/116 (1%) Query: 1410 ETFAIALEGTEGN--RKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAH 1467 A + + R A + VAL+R + V+T++ +G A+ QK T+ Sbjct: 1235 SPTVHAEIDSTIDVERYGRASYNLLNVALTRSRYQTTVFTNSLEGLDQAVQTVDQKTTSI 1294 Query: 1468 DVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPARFIAPGRKYP 1523 + + +R+ + A + A RK P Sbjct: 1295 TSAMLQRKPPSLPTRSQERPSRQHQKKADKARSVPPASPVKAPDRELAKELIRKKP 1350 >UniRef50_C0QEU8 RecD1 n=2 Tax=Desulfobacterales RepID=C0QEU8_DESAH Length = 826 Score = 349 bits (894), Expect = 7e-94, Method: Composition-based stats. Identities = 114/761 (14%), Positives = 234/761 (30%), Gaps = 64/761 (8%) Query: 728 RVSGGDRLQVASVSEDAMT-VVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSA 786 R L V S + +T V R T+ + A++ ++++ G S + Sbjct: 113 RHFNDQTLDVFEQSIERLTEVPGIARKRLKTIEKAWIEHRAIRNVMMFLQSHGISTLFAV 172 Query: 787 TVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGE 846 ++ A+D + + + D + A + Sbjct: 173 KIYKLYGDSAIDTVSRDPY-QLANDFYGIGFFSADKVALSIGLSLDSPQRIMAGIEHVLA 231 Query: 847 TSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGG 906 + + +DL + Sbjct: 232 AGRNFGHCFL--------------TFSQINQQASELLQLDLTHGLTRLLDQ--------M 269 Query: 907 EINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILE-------GKEAVMPLME 959 E + + L+ + SR+ Y E+ + + + ++ V + Sbjct: 270 EQDRLVMVRHLVIDNKV---AEPCYYSRSLYFDERYVAKRVKASIGPCPVDRQRVTAWIH 326 Query: 960 RVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPR 1019 R +L+ Q A+ I+ + F+V+ G G GKTT R ++ + + Sbjct: 327 RYCRVNAMELSLEQAASVEGIV--GEPFSVLTGGPGCGKTTTTRVLVELIR----AMGRS 380 Query: 1020 VVGLGPTHRAVGEMRSA-GVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNT 1078 V+ PT RA M G +A+T+ L R E ++DE SM+ T Sbjct: 381 VLLAAPTGRAAQRMEELIGQEAKTIHRLLGWQNGSFRKNEKSPLDCDFLIVDECSMLDIT 440 Query: 1079 DMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELRE 1138 A + + V GD+DQL ++ G + ++ + EI RQ E Sbjct: 441 LTASLLKAV-PAACQVVFIGDSDQLPSVGAGNVLKDIIASNSVACFRLTEIFRQARESLI 499 Query: 1139 AVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKG 1198 Y+ E + +ES Q+ E + Q + ++ Sbjct: 500 IKYAHKINQGE--IPWIESPFKRPDAWQQRVDCLFVDADEATREQLTFINRVKRLVDDPR 557 Query: 1199 EAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQ 1258 E +E V D + + I +++ ++ Sbjct: 558 ENQTSRVSNPFEFGVNDPGLHGNPITIPKKFQHVDLQQVCGAKTEIEELKAVLKKVHPWS 617 Query: 1259 VMVPVLNTANIRDGELRR-LSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTR 1317 + + + + + + ++ + G + +I Sbjct: 618 SLRYGYTALDTVKMLFQHWIPKYYGSSSEIQILTPMTRGTLGTINLNRVIQ--------- 668 Query: 1318 LISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVT--LS 1375 + + G GDR+ K++ + G + + ++ +T +S Sbjct: 669 --AAVNPLTHGTAQLKVGERIFRVGDRVIHRKNNYDLGVFNGDIGRIVSIDNVELTCVVS 726 Query: 1376 DGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVA 1435 RE+ +E+ + +DLAYA+T H +QG+ I + M Y Sbjct: 727 FFPDGREVIYQKEEVIE-LDLAYAVTIHKSQGSEFE--IVIIPVMTQHYKMLFRNLIYTG 783 Query: 1436 LSRMKQHVQVYTDNRQGWTDAINNAV--QKGTAHDVFEPKP 1474 L+R + + ++ R+ A+ N Q+ TA + +P Sbjct: 784 LTRART-LALFVGTRKALAMAVMNQDTGQRQTALEQLLAQP 823 Score = 200 bits (507), Expect = 6e-49, Method: Composition-based stats. Identities = 96/733 (13%), Positives = 186/733 (25%), Gaps = 100/733 (13%) Query: 194 IAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVEAFSGRSQTIREAVGEDASLKS 253 G +K+ + + E+PG+ R +TI +A E ++++ Sbjct: 101 KGVGPKTAKKIVRHFNDQTLDVFEQSIERLTEVPGIAR----KRLKTIEKAWIEHRAIRN 156 Query: 254 ----------RDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRT 303 + A+ K + + Q + AD Sbjct: 157 VMMFLQSHGISTLFAVKIYKLYGDSAIDTVSRDPYQL-------ANDFYGIGFFSADKVA 209 Query: 304 LTPGPASQDGPDVQQAVTQAIAGLSERKVQF-TYTDVLARTVGILPPE---NGVIERARA 359 L+ G + + + +A F T++ + + +L + + Sbjct: 210 LSIGLSLDSPQRIMAGIEHVLAAGRNFGHCFLTFSQINQQASELLQLDLTHGLTRLLDQM 269 Query: 360 GIDEAI-SREQLIPLDREKGLFTSGIHVLDELSVRALS----------RDIMKQNRVTVH 408 D + R +I + + S DE V R + Sbjct: 270 EQDRLVMVRHLVIDNKVAEPCYYSRSLYFDERYVAKRVKASIGPCPVDRQRVTAWIHRYC 329 Query: 409 PEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAA 468 ++ + + +V + ++++G G G+ LV + R GR V + A Sbjct: 330 RVNAMELSLEQAASVEGIV--GEPFSVLTGGPGC-GKTTTTRVLVELIRAMGRSVLLAAP 386 Query: 469 DRRSQMNMKQDERLSGELITGRRQLLEG------MAFTPGSTVIVDQGEKLSLKETLTLL 522 R+ M++ + I G + +IVD+ L + T +LL Sbjct: 387 TGRAAQRMEELIGQEAKTIHRLLGWQNGSFRKNEKSPLDCDFLIVDECSMLDITLTASLL 446 Query: 523 DGAARHNVQVLITDSGQR--TGTGSALMAMKDAGVNTYRWQGGEQRP-------ATIISE 573 V I DS Q G G+ L + + R Sbjct: 447 KAVPAACQVVFIGDSDQLPSVGAGNVLKDIIASNSVACFRLTEIFRQARESLIIKYAHKI 506 Query: 574 PDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIR------------------ 615 + + + + + + + + LT R Sbjct: 507 NQGEIPWIESPFKRPDAWQQRVDCLFVDADEATREQLTFINRVKRLVDDPRENQTSRVSN 566 Query: 616 -------------------------SELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMY 650 + G E L V S RY Sbjct: 567 PFEFGVNDPGLHGNPITIPKKFQHVDLQQVCGAKTEIEELKAVLKKVHPWSSLRYGYTAL 626 Query: 651 RPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKM 710 ++ Q I +T + ++ L + + + Sbjct: 627 DTVKMLFQHWIPKYYGSSSEIQILTPMTRGTLGTINLNRVIQAAVNPLTHGTAQLKVGER 686 Query: 711 PVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKL 770 G+R+ L V GD ++ S+ +T VV + + L L Sbjct: 687 IFRVGDRVIHRKNNYDLGVFNGDIGRIVSIDNVELTCVVSFFPDGREVIYQKEEVIELDL 746 Query: 771 ENGWVETPGHSVSDSATVFASVTQ---MAMDNATLNGLARSGRDVRLYSSLDETRTAEKL 827 + +TQ M N GL R+ + A Sbjct: 747 AYAVTIHKSQGSEFEIVIIPVMTQHYKMLFRNLIYTGLTRARTLALFVGTRKALAMAVMN 806 Query: 828 ARHPSFTVVSEQI 840 EQ+ Sbjct: 807 QDTGQRQTALEQL 819 >UniRef50_B9MIL4 Conjugative relaxase domain protein n=1 Tax=Diaphorobacter sp. TPSY RepID=B9MIL4_DIAST Length = 1093 Score = 348 bits (891), Expect = 1e-93, Method: Composition-based stats. Identities = 174/1002 (17%), Positives = 318/1002 (31%), Gaps = 114/1002 (11%) Query: 1 MMSIAQVRSAGSA---GNYY------TDKDNYYVLGSMGERWAGRGAEQLGLQGS-VDKD 50 M+S+ ++S G YY + N +W G +E+LG + S V + Sbjct: 1 MLSMKSIKSGGGVSKVAAYYEGYQLGAEDPNAKQHDEPNGKWIGAFSERLGFKDSIVHRG 60 Query: 51 VFTRLLEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDK---RLIDAHN 107 L+G P + G RH+PGYDLTFSAPKSVS+ + + AH Sbjct: 61 EIESALKGYDPKTGNPFSNNAGDERHKPGYDLTFSAPKSVSVAWASASPELQREISAAHQ 120 Query: 108 QAVDFAVRQVEALASTRVMTDG--QSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANV 165 +A++ A+ E + +G + V + A F H ++R EP LHTH VV N+ Sbjct: 121 RAIESAIEYAEQTGGAFIQREGHAGAIKVPHHEIAAATFEHSSNRAGEPHLHTHCVVMNI 180 Query: 166 TQHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWE 225 +++ GK + YA+ G YR + ++E LG++ E GK + Sbjct: 181 SEN------------GKRVDFDTRYAH--TIGTAYRAEFAHELEKLGFQIEKDGKS--FR 224 Query: 226 MPGVPVEA---FSGRSQTIREAVGEDA--SLKSRDVAALDTRKSKQHVDPEIKMAEWMQT 280 + G P E S R+ I E + S K+R++ L TR+ K E + Sbjct: 225 LDGFPKELEQQLSTRAAQIAERQAQTGMKSDKAREMHQLATREMKGERPRETAFNAAREA 284 Query: 281 LKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVL 340 E GF++ + RD + Q + + + Q + + Sbjct: 285 AAENGFNVESLRDQSHQASQGK---------------EPPAQLHETAFSEASTLSRAQLE 329 Query: 341 ARTVGILPPENGVIERARAGIDEAISREQLIPLDREKG--LFTSGIHVLDELSVRALSR- 397 I+ A + + E +L+ L ++G FTS + E + ++ Sbjct: 330 RAAFERAQVNGQDIKAALSELRELEQSGELVRLKDKEGNDRFTSREMLEIETGLAQYAKA 389 Query: 398 ------DIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAE 451 D +R + + + A+ + R S A+V G G AG+ + Sbjct: 390 AAHTPTDARADSRNVEDLIQKKGLSNDQAQAMRHITDSRNSFAVVEGTAG-AGKSYMLGA 448 Query: 452 LVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGM--AFTPGSTVIVDQ 509 G V A ++ +++ + + I G Q +E + V+VD+ Sbjct: 449 AREAWEASGSRVVGCALAGKAASGLEEGSGIKSDTIHGTLQRIERGELQLDKQTVVVVDE 508 Query: 510 GEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSALMAM--------KDAGVNTYRWQ 561 + L D A + +V++ ++ A AM + A + R Q Sbjct: 509 AGMAGSRLMSRLCDQAQQAGAKVVLVGDTRQLQPVDAGGAMRSMKTAAGQAAEMTEIRRQ 568 Query: 562 GGE---------------------QRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQ 600 E Q + +A + ++ G+ S++ Sbjct: 569 HHEADRQMVTDLKNGEAGKALQTMQERGYLREHATPEHMREAIARNVVNDLREGKTSISL 628 Query: 601 VSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWN 660 + +E + QA R++ + G+L P+ T T R++ R + + Sbjct: 629 AARRQEVQAINQAARAQARDAGLLHGPDRTFTTQRTPESAERAQAFAVGDRVITLKNDRS 688 Query: 661 PETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLF--RPEKMPVADGERL 718 + ++ + + RD G+ Q + + + K +R Sbjct: 689 LDLKNGQTWTVTAAQ-DGRLTLKRDGDGKEQSISQKQYKALDHAYCATVHKSQGVTVDRA 747 Query: 719 RVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETP 778 V V E + +++ L E Sbjct: 748 HVAHDSAMS-------------DRSLSYVAASRHREAMSYHHTNAQRDELHKEMSRARDK 794 Query: 779 GHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSE 838 S + ++ ++ AE+ H ++ Sbjct: 795 DTSADYERAQPPGHDGPGPEGGAAAKGKQAEQEHDDEQPRRPQTDAERRQEHEAWADRDR 854 Query: 839 QIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEG 898 E A + P + P DL A Sbjct: 855 DRAQDYQRDQAERAAERRPQQAQQPRELIRDRRTPEQREHDA-----DLARAALKTGGTM 909 Query: 899 TGFTELGGEINAQIKRGDLLYV-DVAKGYGTGLLVSRASYEA 939 ++ +I R + D Y G R + Sbjct: 910 PQAAKINRDIEKGRARWEYNSQGDRFLQYRDGRTYHRDLHAR 951 Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 87/459 (18%), Positives = 151/459 (32%), Gaps = 19/459 (4%) Query: 736 QVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETP-GHSVSDSATVFASVTQ 794 V ++SE+ V R + F + G+ G S Q Sbjct: 176 VVMNISENGKRVDFDTRYAHTIGTAYRAEFAHELEKLGFQIEKDGKSFRLDGFPKELEQQ 235 Query: 795 MAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAIS 854 ++ A + + ++ + A E Sbjct: 236 LSTRAAQIAERQAQTGMKSDKAREMHQLATREMKGERPRETAFNAAREAAAENGFNVESL 295 Query: 855 HQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEA-KSFAAEGTGFTELGGEINAQIK 913 +S + ++ S+ S L A + G E+ + Sbjct: 296 RDQSHQASQGKEPPAQLHETAFSEASTLSRAQLERAAFERAQVNGQDIKAALSELRELEQ 355 Query: 914 RGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEA-VMPLMERVPGELMEK---L 969 G+L+ + G SR E E + ++ + E + + L Sbjct: 356 SGELVRL--KDKEGNDRFTSREMLEIETGLAQYAKAAAHTPTDARADSRNVEDLIQKKGL 413 Query: 970 TSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRA 1029 ++ Q A R I ++ + F VV+G AG GK+ A A E+ RVVG +A Sbjct: 414 SNDQAQAMRHITDSRNSFAVVEGTAGAGKSYMLGAAREA----WEASGSRVVGCALAGKA 469 Query: 1030 VGEMRS-AGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIA 1088 + +G+ + T+ L + GE T+ ++DE+ M G+ M+R Sbjct: 470 ASGLEEGSGIKSDTIHGTL----QRIERGELQLDKQTVVVVDEAGMAGSRLMSRLCDQAQ 525 Query: 1089 AGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPE-LREAVYSLINRD 1147 G + V GDT QLQ + G R +T + A M EI RQ E R+ V L N + Sbjct: 526 QAGAKVVLVGDTRQLQPVDAGGAMRSMKTAAG-QAAEMTEIRRQHHEADRQMVTDLKNGE 584 Query: 1148 VERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAK 1186 +AL ++ + + + +E K Sbjct: 585 AGKALQTMQERGYLREHATPEHMREAIARNVVNDLREGK 623 Score = 96.6 bits (238), Expect = 7e-18, Method: Composition-based stats. Identities = 86/606 (14%), Positives = 157/606 (25%), Gaps = 33/606 (5%) Query: 1155 LESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVR 1214 L+ ++ ++ + ++L + Q+A K D Sbjct: 488 LQRIERGELQLDKQTVVVVDEAGMAGSRLMSRLCDQAQQAGAKVVLVGDTRQLQPVDAGG 547 Query: 1215 DYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGEL 1274 A + + + M+ D++ + + + + Sbjct: 548 AMRSMKTAAGQAAEMTEIRRQHHEADRQMVTDLKNGEAGKALQTMQERGYLREHATPEHM 607 Query: 1275 RRLSTWETHRDALVLVDN--VYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLY 1332 R D + + R + + Q + R + Sbjct: 608 REAIARNVVNDLREGKTSISLAARRQEVQAINQAARAQARDAGLLHGPDRTFTTQRTPES 667 Query: 1333 TPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQ 1392 GDR+ K+DR WTVTA +TL +E + ++ + Sbjct: 668 AERAQAFAVGDRVITLKNDRSLDLKNGQTWTVTAAQDGRLTLKRDGDGKE-QSISQKQYK 726 Query: 1393 HIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDN--R 1450 +D AY T H +QG + A + M+ +YVA SR ++ + + N R Sbjct: 727 ALDHAYCATVHKSQGVTVDRAHVAHDSA-----MSDRSLSYVAASRHREAMSYHHTNAQR 781 Query: 1451 QGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGD 1510 ++ A K T+ D +P + A+ +QA D Sbjct: 782 DELHKEMSRARDKDTSADYERAQPPGHDGPGPEGGAAAKG-----------KQAEQEHDD 830 Query: 1511 SPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGEGRVKGSGDAQ 1570 R + Q + A DR+ + + Sbjct: 831 EQPRRPQTDAERRQEHEAWADRDRDRAQDYQRDQA-ERAAERRPQQAQQPRELIRDRRTP 889 Query: 1571 FVALQGSRNGESLLAD--NMQDGVRIARDNPDSGVVVRIAGEGRP--WNPGAITGGRVWG 1626 + + L M +I RD +G T R Sbjct: 890 EQREHDADLARAALKTGGTMPQAAKINRDIEKGRARWEYNSQGDRFLQYRDGRTYHRDLH 949 Query: 1627 DIPDNSVQPGAGNGEPVTAEVLAQRQAEEAIRRETERRADEIVRKMAENKPDLPDG--KT 1684 SV+ +T ++A R + E A P P + Sbjct: 950 ARGPQSVELRQAATLGLTT-----KRATIVTRGGADMANPESQHAAANAGPRAPSAGERW 1004 Query: 1685 EQAVREIAGQERDRAAITEREAALPEGVLREPQRVREAVREIARENLLQERLQQMERDMV 1744 A R+ Q + A R A Q R + + Sbjct: 1005 IMAARDDYKQNKQPAFQDGRGRAEAGDDGARHQFQRGRPASPGEPKHAGSGVTGGHLQLD 1064 Query: 1745 RDLQKE 1750 R Q+E Sbjct: 1065 RPGQRE 1070 >UniRef50_D1BL70 TrwC relaxase n=1 Tax=Veillonella parvula DSM 2008 RepID=D1BL70_VEIPT Length = 861 Score = 345 bits (884), Expect = 9e-93, Method: Composition-based stats. Identities = 150/931 (16%), Positives = 301/931 (32%), Gaps = 188/931 (20%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGER-WAGRGAEQLGLQGSVDKD-------VF 52 M++ + V S AG YY +KD+YY E W G GL S+ D Sbjct: 1 MVTTSNV-STIQAGQYY-NKDDYYSRTITQEDFWFGN-----GLLSSIGDDIPNPYKSTI 53 Query: 53 TRLLEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDK-RLIDAHNQAVD 111 T L + + + + + + DLTFS PKS+S+ + K L+DAHNQAV Sbjct: 54 TPLSQDNYEQKVNTLKDELTPDAKKLAIDLTFSPPKSISIAMLNPALKYDLLDAHNQAVK 113 Query: 112 FAVRQVEA-LASTRVM--TDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH 168 + VE+ R D ++E + T N + A H SR+Q+PQLHTH ++ T Sbjct: 114 NVLTFVESNYVVWRKHTNKDNRTENIKTKNALFACLQHRVSREQDPQLHTHCLLFRKTMI 173 Query: 169 NGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEV----VGKHGMW 224 N + T+ +++NQ F +Y +L + ++ K+ + Sbjct: 174 NSKIMTIEDRF---------IHSNQYLFSLMYDNELSKALQEKRIPLRESLSKDQKNIHF 224 Query: 225 EMPGVP---VEAFSGRSQTIREAVGEDASLKSRD---VAALDTRKSKQHVDPEIKMAEWM 278 E+ G+ ++ FS R I++ + D A L +R+ K D EW Sbjct: 225 EIEGINDTLIDYFSKRKHQIQDYQANQGFSDTWDGAHAAGLASRRPKPPEDLATLEKEWR 284 Query: 279 QTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTD 338 +T+ G + + T + + + ++I L E+ F+ +D Sbjct: 285 KTIDNLGGFV------------INKSTHNKDTSRPLKLNDILKKSIDNLQEKSYAFSKSD 332 Query: 339 VLARTVGILPPENGVIERARAGIDEAISREQLI---PLDREKGLFTSGIHVLDELSV--- 392 ++ + + + + + FT+ ++ + Sbjct: 333 LMIEVYKQGIMLGVTVSEFENIFEHHLQSTLIQVGFRQLNNEIYFTTPKNLARAKYIDSL 392 Query: 393 -------------RALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQ 439 + + + + + + G +A++++ V G Sbjct: 393 LLGPKIENYSTLDQNDANTKIDILSNNLKLSQGWELSKGQKEAINLMLSSSNKYIAVEGI 452 Query: 440 GGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAF 499 G +G+ + + ++ QG V +A ++ ++ + +S + I L Sbjct: 453 AG-SGKTTMLEQAKLLYESQGVNVIGMAFTGKATEALESEAAISSQTIHKYLNHLSPTTP 511 Query: 500 TPG------------STVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR---TGTG 544 IVD+ L+ +L+ + R N +V+ + GTG Sbjct: 512 HNFWDFSSVKKAETPEVWIVDESSMLTDHLLSNILEASERRNAKVVFLGDPNQLLPIGTG 571 Query: 545 SALMAMKDAG---VNTYRWQGGEQRP-----------------------------ATIIS 572 +A M V T R + ++ +I Sbjct: 572 NAFARMTRKDNEQVPTVRMREINRQEEGSNLRKTVEALSGKFENIEKQSPLSYIDNSIKE 631 Query: 573 EPDRNVRYARLAGDFAA-SVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTM 631 P R R + ++ +++ ++S V+ ++ L I L +G L + Sbjct: 632 IPQRQYRLNSVIHEYCNYTLEQQDKSAILVARNNDRNELNSEIHKRLIEKGTLKNENL-- 689 Query: 632 TALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQ 691 L+ V + Y G + + + D Sbjct: 690 --LTSVNQYGIE--SSNPYAIGEKVIFTKNDYKLKDT----------------------- 722 Query: 692 VVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPG 751 GE + + G ++ +++ +TV Sbjct: 723 ----------------------TGETV---------GIKNGQLGKIININGPKVTVQTNT 751 Query: 752 RAEPATLPVSDSPFTALKLENGWVET----PGHSVSDSATVFASVTQMAMDNAT-LNGLA 806 V + G+ T G +V ++ V S + + ++ Sbjct: 752 NQ-----NVIFDTREYKHFDYGYAMTTFKAQGITVDNALIVHDSTQKNSNTRNKIYVDVS 806 Query: 807 RSGRDVRLYSSLDETRTAEKLARHPSFTVVS 837 R+ + V++++ E + T + Sbjct: 807 RAKKSVKIFTDDKEALIKQAKRFQQKITSST 837 Score = 268 bits (684), Expect = 2e-69, Method: Composition-based stats. Identities = 113/669 (16%), Positives = 212/669 (31%), Gaps = 124/669 (18%) Query: 845 GETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTEL 904 G + + ++ ++ + ++ ++ K AFS DL+ E Sbjct: 291 GGFVINKSTHNKDTSRPLKLNDILKKSIDNLQEKSYAFSKSDLMIEVYKQGIMLGVTVSE 350 Query: 905 GGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPG- 963 I + L+ V + + + K I +L K +++ Sbjct: 351 FENIFEHHLQSTLIQVGFRQLNNEIYFTTPKNLARAKYIDSLLLGPKIENYSTLDQNDAN 410 Query: 964 ------------ELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNM 1011 +L+ GQ+ A ++L +S+++ V+G AG GKTT + Sbjct: 411 TKIDILSNNLKLSQGWELSKGQKEAINLMLSSSNKYIAVEGIAGSGKTTML----EQAKL 466 Query: 1012 LPESERPRVVGLGPTHRAVGEMR-SAGVDAQTLASFLHDTQLQQRSGETPDFS------N 1064 L ES+ V+G+ T +A + A + +QT+ +L+ S Sbjct: 467 LYESQGVNVIGMAFTGKATEALESEAAISSQTIHKYLNHLSPTTPHNFWDFSSVKKAETP 526 Query: 1065 TLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQ--QTRSAAD 1122 ++++DESSM+ + ++ + V GD +QL I G F + Sbjct: 527 EVWIVDESSMLTDHLLSNILEASERRNAKVVFLGDPNQLLPIGTGNAFARMTRKDNEQVP 586 Query: 1123 VAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHS 1182 M+EI RQ E +V S Sbjct: 587 TVRMREINRQ----------------------------------EEGSNLRKTVEALSGK 612 Query: 1183 QEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNS 1242 E ++ + +++ +Y T E ++++ I+ N DR LNS Sbjct: 613 FENIEKQSPLSYIDNSIKEIPQRQYRLNSVIHEYCNYTLEQQDKSAILVARNNDRNELNS 672 Query: 1243 MIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISK 1302 IH + G L E ++ V + N Y + Sbjct: 673 EIHKRLIEKGTLKNENLLTSVN--------------------QYGIESSNPYAIGEKVIF 712 Query: 1303 DDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVW 1362 L+D G T G + Sbjct: 713 TKNDYKLKDTTGETV-------------------------------------GIKNGQLG 735 Query: 1363 TVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGN 1422 + ++G VT+ I +E +H D YA+T AQG + A+ + + Sbjct: 736 KIININGPKVTVQTNTNQNVIFDTRE--YKHFDYGYAMTTFKAQGITVDNALIVHDSTQK 793 Query: 1423 RKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTA---HDVFEPKPDREVM 1479 YV +SR K+ V+++TD+++ QK T+ +R+ + Sbjct: 794 NSN--TRNKIYVDVSRAKKSVKIFTDDKEALIKQAKRFQQKITSSTFTPYIAKGKERKPI 851 Query: 1480 NAERLFSTA 1488 + + S Sbjct: 852 HVSKEKSKE 860 >UniRef50_C9CRW2 TraI n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9CRW2_9RHOB Length = 822 Score = 345 bits (883), Expect = 1e-92, Method: Composition-based stats. Identities = 174/876 (19%), Positives = 311/876 (35%), Gaps = 128/876 (14%) Query: 483 SGELITGRR---QLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNV-QVLITDSG 538 S + + S ++VD+ LS K+ + +D A R +V++ Sbjct: 10 SAATVASIVSSERYYPQKVDNSRSILLVDEASMLSAKDMRSFMDYAERTKAARVVLVGDT 69 Query: 539 QR---TGTGSALMAMKDAGVNTYRWQGGEQRPATI---------------------ISEP 574 ++ G M++AG+ T +++ S Sbjct: 70 KQLDAVSAGQPFAQMQEAGMRTAVMDEIQRQRDRNLKAAVYDAVRGDIAGAFDKLQDSIE 129 Query: 575 DRNVRYARLAGDFAASVKAGEESVAQVSGVRE-QAILTQAIRSELKTQGVLGLPEVTMTA 633 + A + A ++ +A + A+R LK +G L V + Sbjct: 130 KADNPRQAAADKYLALSPEDRSETRILTLNNTSRAEINSAVREGLKAEGTLLRDGVVIEG 189 Query: 634 LSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSH----DRYVIDRVTAQSHSLTLRDA-QG 688 L P + S + Y PG V++ + Y I+RV +++L++ G Sbjct: 190 LVPRPMTSVEKSDSHNYAPGEVVQPIVDNREAGLQRNTLYRIERVDHATNTLSVERETDG 249 Query: 689 ETQVVRISS------LDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSE 742 E + +++ L +S ++ E ++ GE +RV ++ G R V S Sbjct: 250 ERISIPLAAQAGHQPLGASLVAYQNEAREISTGEAVRVRITDKDQGLTNGTRATVTSTEN 309 Query: 743 DAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPG----HSVSDSATVFASVTQMAMD 798 +T+ + ++ + A LE+ + T +V S +MA Sbjct: 310 GVITL---STRDGRSVEIEPQSLGARGLEHDYAATAHSVQGETVDRVIVSMNSGDRMATQ 366 Query: 799 NATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKS 858 ++R+ + L + + + Sbjct: 367 KGFYVEISRARDEAVLITDNRVALARKIAENTGVQVNALS------------NKLDGFFQ 414 Query: 859 ALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLL 918 A +A+ A+ + ++ A+ DL T A +F+ + F ++ EINA+I+ G L Sbjct: 415 KPEVDAVRAVSRAVEHISERESAYLRTDLATAALTFSIG-SSFEDVDKEINARIEDGRL- 472 Query: 919 YVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELME----------- 967 G +L +AS E E+SI+ E +++ + G E Sbjct: 473 ---FVSGKDNRVLTDKASVELERSIIATWKESEQSEGLSIPSEQGRNGESLLIRRLSVVR 529 Query: 968 KLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTH 1027 LT GQR++ L + R+ VQG+AG GKT + V G+ P+H Sbjct: 530 TLTDGQRSSIETALTGTGRYVGVQGFAGTGKTHML----ERLAHYAHGAGYEVKGMAPSH 585 Query: 1028 RAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALI 1087 +AV E+ S A+TLA +T ++ E D S T+ ++DE+SM +M Sbjct: 586 QAVHELASVLGSAETLAK---NTTAERHHPEDVDNSKTILVVDEASMASAKEMRDLMGYA 642 Query: 1088 AAGGG-RAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTP-ELREAVYSLIN 1145 R V GDT QL A+A GQPF ++ A+M +I RQ +L+EAVY I Sbjct: 643 ERTRSPRVVFVGDTQQLDAVAAGQPFAQL-QKAGMRTAVMDDIRRQRDVDLKEAVYHSIR 701 Query: 1146 RDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVP 1205 +++ AL L+ + A Sbjct: 702 GEIQPALDRLDGNVLEVDDPRAEA------------------------------------ 725 Query: 1206 MTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLN 1265 Y PE R+ T I+T N R +N + + K G L E+V V L+ Sbjct: 726 -------ADRYLSLPPEVRDTTRILTLTNVARSEINEAVREGMWKEGTLTGEEVTVQGLS 778 Query: 1266 TANIRDGELRRLSTWETHRDALVLVDNVYHRIAGIS 1301 + + +L ++ + + + + Sbjct: 779 NQQLTESQLADARSYAVGTRVMPVATSEKFSLVKTY 814 Score = 190 bits (482), Expect = 4e-46, Method: Composition-based stats. Identities = 144/735 (19%), Positives = 237/735 (32%), Gaps = 83/735 (11%) Query: 1040 AQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAG-GGRAVASG 1098 A T+AS + + + + S ++ L+DE+SM+ DM R V G Sbjct: 11 AATVASIVSSERYYPQKVDN---SRSILLVDEASMLSAKDMRSFMDYAERTKAARVVLVG 67 Query: 1099 DTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTP-ELREAVYSLINRDVERALSGLES 1157 DT QL A++ GQPF Q + A+M EI RQ L+ AVY + D+ A L+ Sbjct: 68 DTKQLDAVSAGQPFAQMQE-AGMRTAVMDEIQRQRDRNLKAAVYDAVRGDIAGAFDKLQ- 125 Query: 1158 VKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYT 1217 + +A Y Sbjct: 126 ------------------------------------------DSIEKADNPRQAAADKYL 143 Query: 1218 GRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRL 1277 +PE R +T I+T N R +NS + + + G L ++ V++ L + E Sbjct: 144 ALSPEDRSETRILTLNNTSRAEINSAVREGLKAEGTLLRDGVVIEGLVPRPMTSVEKSDS 203 Query: 1278 STWETHRDAL--------VLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGV 1329 + L N +RI + ++++ R+ P A A Sbjct: 204 HNYAPGEVVQPIVDNREAGLQRNTLYRIERVDHATNTLSVERETDGERISIPLAAQAGHQ 263 Query: 1330 T------LYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREI 1383 Y + + TG+ +R +D+++G + TVT+ +TLS Sbjct: 264 PLGASLVAYQNEAREISTGEAVRVRITDKDQGLTNGTRATVTSTENGVITLSTRDGRSVE 323 Query: 1384 RPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHV 1443 Q + ++ YA TAH QG + I + + MA + YV +SR + Sbjct: 324 IEPQSLGARGLEHDYAATAHSVQGETVDRVIV---SMNSGDRMATQKGFYVEISRARDEA 380 Query: 1444 QVYTDNRQGWTDAINNAV-----QKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGR 1498 + TDNR I D F KP+ + + A R+ A R Sbjct: 381 VLITDNRVALARKIAENTGVQVNALSNKLDGFFQKPEVDAVRAVSRAVEHISERESAYLR 440 Query: 1499 AVLRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFS 1558 L A L I + + D +G LT L Sbjct: 441 TDLATAALTFS------IGSSFEDVDKEINARIEDGRLFVSGKDNRVLTDKASVELERSI 494 Query: 1559 GEGRVKGSGDAQFVA-LQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPG 1617 + + RNGESLL + VR D S + + G GR Sbjct: 495 IATWKESEQSEGLSIPSEQGRNGESLLIRRLS-VVRTLTDGQRSSIETALTGTGRYVGVQ 553 Query: 1618 AITGGRVWGDIPDNSVQPGAGNGEPVTAEVLAQRQAEEAIRRETERRADEIVRKMAENKP 1677 G + + E Q E A + + + Sbjct: 554 GFAGTGKTHMLERLAHYAHGAGYEVKGMAPSHQAVHELASVLGSAETLAKNTTAERHHPE 613 Query: 1678 DLPDGKT----EQAVREIAGQERDRAAITEREAALPEGVLREPQRVREAVREIARENLLQ 1733 D+ + KT ++A A + RD ER + + + Q++ L + Sbjct: 614 DVDNSKTILVVDEASMASAKEMRDLMGYAERTRSPRVVFVGDTQQLDAVAAGQPFAQLQK 673 Query: 1734 ERLQQMERDMVRDLQ 1748 ++ D +R + Sbjct: 674 AGMRTAVMDDIRRQR 688 Score = 169 bits (428), Expect = 8e-40, Method: Composition-based stats. Identities = 63/401 (15%), Positives = 128/401 (31%), Gaps = 47/401 (11%) Query: 307 GPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAIS 366 G + D +AV++A+ +SER+ + TD+ + E I+ I Sbjct: 411 GFFQKPEVDAVRAVSRAVEHISERESAYLRTDLATAALTFSI--GSSFEDVDKEINARIE 468 Query: 367 REQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSV------------- 413 +L ++ + T V E S+ A ++ + +++ E+ Sbjct: 469 DGRLFVSGKDNRVLTDKASVELERSIIATWKESEQSEGLSIPSEQGRNGESLLIRRLSVV 528 Query: 414 -PRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRS 472 T G ++ V G G G+ + L A G EV+ +A ++ Sbjct: 529 RTLTDGQRSSIETALTGTGRYVGVQGFAG-TGKTHMLERLAHYAHGAGYEVKGMAPSHQA 587 Query: 473 QMNMKQDERLSGELITGRRQLLEGMAFT---PGSTVIVDQGEKLSLKETLTLLDGAARHN 529 + S E + + ++VD+ S KE L+ A R Sbjct: 588 VHELASVLG-SAETLAKNTTAERHHPEDVDNSKTILVVDEASMASAKEMRDLMGYAERTR 646 Query: 530 V-QVLITDSGQR---TGTGSALMAMKDAGVNTYRWQGGEQRPATIISEP----------- 574 +V+ Q+ G ++ AG+ T ++ + E Sbjct: 647 SPRVVFVGDTQQLDAVAAGQPFAQLQKAGMRTAVMDDIRRQRDVDLKEAVYHSIRGEIQP 706 Query: 575 ----------DRNVRYARLAGDFAASVKAGEESVAQVS-GVREQAILTQAIRSELKTQGV 623 + + A A + + ++ ++ ++ + +A+R + +G Sbjct: 707 ALDRLDGNVLEVDDPRAEAADRYLSLPPEVRDTTRILTLTNVARSEINEAVREGMWKEGT 766 Query: 624 LGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETR 664 L EVT+ LS L Y G + + Sbjct: 767 LTGEEVTVQGLSNQQLTESQLADARSYAVGTRVMPVATSEK 807 >UniRef50_A9KH87 DNA helicase n=9 Tax=Coxiella burnetii RepID=A9KH87_COXBN Length = 875 Score = 337 bits (863), Expect = 3e-90, Method: Composition-based stats. Identities = 159/636 (25%), Positives = 278/636 (43%), Gaps = 47/636 (7%) Query: 856 QKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRG 915 + ++A++ + V+ S++ F+ ++ ++ S+ F + ++ ++K G Sbjct: 34 PYQEEPSMTKKAVNYGISVIASREATFTYQSVVEKSLSYGNANVSFKAVQIDLRERVKSG 93 Query: 916 DLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLM---ERVPGELMEKLTSG 972 +L+ G LL ++ + E++I+ I GK V P + E LT G Sbjct: 94 ELMTRQSPSG--DVLLATKETVALEQTIIDQIKSGKNTVTPFLLKDEIQHKLDASSLTEG 151 Query: 973 QRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGE 1032 Q+AA ++ T DRF +VQGYAG GK+T + + A++ + ++ L PTH+AV E Sbjct: 152 QKAACTLLATTQDRFVMVQGYAGTGKSTMLQTLQDALSQSNIINKESIIALAPTHKAVKE 211 Query: 1033 MRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAG-G 1091 ++S G++AQT+ SFL + N L LLDESSMVGN D + +++ Sbjct: 212 LQSKGIEAQTVKSFLVGEAHLSLNN-YRHLDNKLILLDESSMVGNRDFQQLQSIVEKAKN 270 Query: 1092 GRAVASGDTDQLQAIAPGQPFRL--QQTRSAADVAIMKEIVRQT-PELREAVYSLINRDV 1148 GD QL ++ G+P + + A M E++RQ PEL++ L+ Sbjct: 271 CHCAYIGDKAQLLSVEDGKPAEIAYLSREADIATATMSEVLRQKDPELKKITQELMMSTP 330 Query: 1149 ERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTL 1208 E L +K + +E + + +++ Sbjct: 331 ESVDRALTQLKQNGWVIEESSVDRKGPISDS----------------------------- 361 Query: 1209 YEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTAN 1268 + I Y + E R T+I NE+R+ +N I +R+ GEL E V +L + Sbjct: 362 VQKIAEHYCALSLEERTNTVIAAATNENRQTINEAIRVIRQGKGELQGEFVTTTLLMDSR 421 Query: 1269 IRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPR-EAVAE 1327 + D EL + ++N Y ++ + D + L+D + ++++ E Sbjct: 422 LTDAELHHSPNYTVGDVVR--LNNQYLTVSKTNHDKNTLILEDGDKQNKVLNLDLMPKRE 479 Query: 1328 GVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDS--VTLSDGQQTREIRP 1385 V L+ +T + +GD +++TKSD+ERG VA+ VT V+ +T + Sbjct: 480 TVELFHRETTHIQSGDILKWTKSDKERGLVAHESLRVTHVNKAEHTITALSEKSEHLSID 539 Query: 1386 GQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQV 1445 + QHID YA T HG QGA+ + L + L YVA++R V++ Sbjct: 540 LNQPQNQHIDYNYAPTVHGLQGATAQSILILLD--SHNSLSNTMRLLYVAVTRSTHQVRI 597 Query: 1446 YTDNRQGWT-DAINNAVQKGTAHDVFEPKPDREVMN 1480 +TDN + I+ K +A + RE Sbjct: 598 FTDNLEAVRFQIIHEKGDKKSALETIGLLTMREEQP 633 Score = 220 bits (559), Expect = 5e-55, Method: Composition-based stats. Identities = 78/648 (12%), Positives = 191/648 (29%), Gaps = 75/648 (11%) Query: 297 QRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIER 356 ++ LT P ++ ++AV I+ ++ R+ FTY V+ +++ N + Sbjct: 23 KKPLASELTRLPYQEEPSMTKKAVNYGISVIASREATFTYQSVVEKSLS-YGNANVSFKA 81 Query: 357 ARAGIDEAISREQLIPLDREKG--LFTSGIHVLDELSVRALSRDIMKQNRV------TVH 408 + + E + +L+ G L + V E ++ + H Sbjct: 82 VQIDLRERVKSGELMTRQSPSGDVLLATKETVALEQTIIDQIKSGKNTVTPFLLKDEIQH 141 Query: 409 PEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGR----EVQ 464 + T G A ++LA + +V G G G+ + L + + Sbjct: 142 KLDASSLTEGQKAACTLLATTQDRFVMVQGYAG-TGKSTMLQTLQDALSQSNIINKESII 200 Query: 465 IIAADRRSQMNMKQDERLSGELITGRR-----QLLEGMAFTPGSTVIVDQGEKLSLKETL 519 +A ++ ++ + + + L +++D+ + ++ Sbjct: 201 ALAPTHKAVKELQSK-GIEAQTVKSFLVGEAHLSLNNYRHLDNKLILLDESSMVGNRDFQ 259 Query: 520 TLLDGAARH--NVQVLITDSGQRTGT--GSA--------LMAMKDAGVNTYRWQGGEQ-- 565 L + I D Q G + A ++ Q + Sbjct: 260 QLQSIVEKAKNCHCAYIGDKAQLLSVEDGKPAEIAYLSREADIATATMSEVLRQKDPELK 319 Query: 566 ----------------------------RPATIISEPDRNVRYARLAGDFAASVKAGEES 597 +++ + + ++A + A + Sbjct: 320 KITQELMMSTPESVDRALTQLKQNGWVIEESSVDRKGPISDSVQKIAEHYCALSLEERTN 379 Query: 598 VAQVSGVRE-QAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVM 656 + E + + +AIR + +G L VT T L L + Y G V+ Sbjct: 380 TVIAAATNENRQTINEAIRVIRQGKGELQGEFVTTTLLMDSRLTDAELHHSPNYTVGDVV 439 Query: 657 EQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSS--WSLFRPEKMPVAD 714 N + + ++L L D + +V+ + + LF E + Sbjct: 440 RLNN------QYLTVSKTNHDKNTLILEDGDKQNKVLNLDLMPKRETVELFHRETTHIQS 493 Query: 715 GERLRVTGKIPGLRVSGGDRLQVASVSEDAMTV-VVPGRAEPATLPVSDSPFTALKLENG 773 G+ L+ T + + L+V V++ T+ + ++E ++ ++ + Sbjct: 494 GDILKWTKSDKERGLVAHESLRVTHVNKAEHTITALSEKSEHLSIDLNQPQNQHIDYNYA 553 Query: 774 WVETPGHSVSDSATVFASVTQMAMD---NATLNGLARSGRDVRLYSSLDETRTAEKLARH 830 + + + + ++ + RS VR+++ E + + Sbjct: 554 PTVHGLQGATAQSILILLDSHNSLSNTMRLLYVAVTRSTHQVRIFTDNLEAVRFQIIHEK 613 Query: 831 PSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESK 878 E I + + + + + Sbjct: 614 GDKKSALETIGLLTMREEQPLSPDSKNVNANATSSNHYFKKASHKSER 661 >UniRef50_A4JFK5 ATP-dependent exoDNAse (Exonuclease V) alpha subunit-helicase superfamily I member-like protein n=1 Tax=Burkholderia vietnamiensis G4 RepID=A4JFK5_BURVG Length = 1749 Score = 333 bits (852), Expect = 6e-89, Method: Composition-based stats. Identities = 145/898 (16%), Positives = 291/898 (32%), Gaps = 109/898 (12%) Query: 17 YTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLE-------GRLPDGADLSRM 69 Y + + +W G+ A++LGLQ D ++ E G P+ Sbjct: 104 YLQVEGAPFDAELLPQWHGKVAQRLGLQDPTDSASLEKMFEQVDQLAKGFAPNTGGEGVH 163 Query: 70 QDGSNRHRPGYDLTFSAPKSVSMMAMLGGD---KRLIDAHNQAVDFAVRQVEALASTRVM 126 G++ H G+D+TFS K S+M + GGD K + D H++AV + +E Sbjct: 164 GAGAD-HMIGWDVTFSMIKPPSIMMVNGGDAIKKEIYDIHHEAVTLVMEFIEKHVIMTRF 222 Query: 127 TDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDKVGKTGFI 186 G + A+F+H SRD +PQLHTH V+ N + V +T Sbjct: 223 GQGGKIKSKVEGIAAAMFSHRASRDWDPQLHTHVVLFNAVSA----INPDGEHVWRTIDA 278 Query: 187 ENVYANQIAFGRLYREKLKEQVEALGYETEVVG-KHGMWEMPGVPVEAF---SGRSQTIR 242 + +YA ++A G LYR + ++ LG+ E G K + + G P EA S R+ I Sbjct: 279 KTLYAMKMATGALYRSHVAKRFAELGFIIERTGKKQDTFTLAGFPTEAVEQASKRAAAID 338 Query: 243 EAVGEDAS----LKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQR 298 + + E K + +A L TRK K + W G+ ++ + Sbjct: 339 KLLDEKGLTDAHAKQKSLAKLATRKPKDEPPYPELLQHWRDVEGNYGWSPEKTQELLAES 398 Query: 299 ADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERAR 358 R P + + ++E + F +D++ + I + I++ Sbjct: 399 RARREAGEVPPFKYDRAA------ILERVTEHEAAFLESDLIH-AIAIESVGHWGIDQVV 451 Query: 359 AGIDEAISREQLIPLDRE---KGLFTSGIHVLDELSVRALSRDIMKQNRVTV-------- 407 A S +IPL ++ + LFT+ + E ++ + R V Sbjct: 452 AEAKAIQSHINVIPLQQDAYGRKLFTTPKMLGMEKFIQNRVGVGLADRRHHVPKSLALAH 511 Query: 408 ----HPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREV 463 ++ + +A D ++AI+ G G G+ + G V Sbjct: 512 LREYEKKEGLTLKIEQREAAVKALSDSGTVAIIKGAAG-TGKTTVAKGIARTFELAGSNV 570 Query: 464 QIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTP------------GSTVIVDQGE 511 A + + ++ + + LE S + VD+ Sbjct: 571 FGTAISSGAAAILGKEAGIESFTVADLLSRLERGEHKAQGTEPPKLPLGDKSVLFVDESG 630 Query: 512 KLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSALMA----------MKDAGVNTYRWQ 561 + + L+ +++ ++ +A + A ++ Q Sbjct: 631 MIDTRSMHKLMGYQKEIGFKMVWFGDTRQLAPVAAGNVQLTTEANYGHLNSASMSEITRQ 690 Query: 562 GGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESV----------AQVSGVREQAILT 611 E T++ + R ++ G+ ++ + + ++ + Sbjct: 691 KEEWMRQTVLRSMNAPQRAFKINARGETIDSKGQPTINPAEKIPLYRSLLLTPEQRKAIA 750 Query: 612 QAIRSELKTQGVLGLPEVTMTALSPVWLDSR-----SRYLRDMYRPGMVMEQWNPETRSH 666 ++ V + A++P ++ P E Sbjct: 751 DLESGAVERYLAQHDAAVQLVAVAPGGALDAGAELTAKARARALAPVDAPAAQRKEKLPA 810 Query: 667 DRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEK------MPVADGERLRV 720 D R+ + ++ ++ + A+GER+R Sbjct: 811 DPESAARINGAIRAKLREQGHLGAVDFALTVEKAAPGISDDTSWDGALVRQFAEGERIRF 870 Query: 721 TGKIPGLRVSGGDRLQVASVSEDAM------------TVVVPGRAEPATLPVSDSPFTAL 768 T I L ++ + S+ E+++ TV + RA A + T Sbjct: 871 THPIKELGIARDAMAVIRSLREESISDGRENTTKLIATVQLDARAGVAAQVLDIDLTTHH 930 Query: 769 KLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEK 826 +++G+ A++ + + + + E A + Sbjct: 931 DIDHGYCVRANPKELAE--------SQAVNADLVVEALHRKGRLHIINQKREDEIARR 980 Score = 159 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 81/477 (16%), Positives = 139/477 (29%), Gaps = 44/477 (9%) Query: 826 KLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLA--LPVVESKKLAFS 883 + V +T A S + A L V + AF Sbjct: 370 YPELLQHWRDVEGNYGWSPEKTQELLAESRARREAGEVPPFKYDRAAILERVTEHEAAFL 429 Query: 884 MVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSI 943 DL+ + G ++ E A +++ + YG L + EK I Sbjct: 430 ESDLIHAIAIESVGHWGIDQVVAEAKAIQSHINVIPLQ-QDAYGRKLFTTPKMLGMEKFI 488 Query: 944 LRH----ILEGKEAVMP-----LMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYA 994 + + + V + + L QR A L S +++G A Sbjct: 489 QNRVGVGLADRRHHVPKSLALAHLREYEKKEGLTLKIEQREAAVKALSDSGTVAIIKGAA 548 Query: 995 GVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM-RSAGVDAQTLASFLHDTQLQ 1053 G GKTT + + + V G + A + + AG+++ T+A L + Sbjct: 549 GTGKTTVAKGIARTFELA----GSNVFGTAISSGAAAILGKEAGIESFTVADLLSRLERG 604 Query: 1054 QRSGET------PDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIA 1107 + + P ++ +DES M+ M + G + V GDT QL +A Sbjct: 605 EHKAQGTEPPKLPLGDKSVLFVDESGMIDTRSMHKLMGYQKEIGFKMVWFGDTRQLAPVA 664 Query: 1108 PGQP-FRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERAL-------------- 1152 G + + A M EI RQ E +RA Sbjct: 665 AGNVQLTTEANYGHLNSASMSEITRQKEEWMRQTVLRSMNAPQRAFKINARGETIDSKGQ 724 Query: 1153 ------SGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPM 1206 + + + ++ + A Q A+ G A Sbjct: 725 PTINPAEKIPLYRSLLLTPEQRKAIADLESGAVERYLAQHDAAVQLVAVAPGGALDAGAE 784 Query: 1207 TLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPV 1263 +A R A ++ + E +N I + G LG + V Sbjct: 785 LTAKARARALAPVDAPAAQRKEKLPADPESAARINGAIRAKLREQGHLGAVDFALTV 841 Score = 60.4 bits (144), Expect = 7e-07, Method: Composition-based stats. Identities = 79/683 (11%), Positives = 159/683 (23%), Gaps = 66/683 (9%) Query: 1122 DVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSH 1181 D + +VRQ E ++ +++ A + ++ + + Sbjct: 851 DTSWDGALVRQFAEGERIRFTHPIKELGIARDAMAVIRSLREESISDGRENTTKLIATVQ 910 Query: 1182 SQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLN 1241 AQ + D+ + ++ + R + Sbjct: 911 LDARAGVAAQVLDIDLT-THHDIDHGYCVRANPKELAESQAVNADLVVEALHRKGRLHII 969 Query: 1242 SMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGIS 1301 + + + + V + + G + ++ +N + Sbjct: 970 NQKREDEIARRLVT--DWLDAVQDWPGAKPGPDGKPQRVAMRDKLMLAGENRSVSLLNEI 1027 Query: 1302 KDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSV 1361 + L + G + ++ V + TK + Sbjct: 1028 AREELKKRGELRGKDFQFLRPDDGSDLVDRVRSLAVGERIVFTKPLTKRAVGHRITNGAR 1087 Query: 1362 WTVTAVSGD---------SVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETF 1412 T+ + + + D + + ID Y T H AQGA+ Sbjct: 1088 ATIEDLRLNAKGDVLMRARLDPIDPKAASAVVTINLSEHNAIDHGYGSTIHRAQGATADK 1147 Query: 1413 AIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQ--------------------- 1451 A AL + M YV LSR + Q Y ++ Sbjct: 1148 AFALHSSA-----MGDSRWCYVTLSRARFGTQFYAAAQEIGEMREDLGLKEAVYKSLKRK 1202 Query: 1452 ------------GWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRA 1499 + + K +A D +V+ + G Sbjct: 1203 EQWEIDQVVQRMALAEVVGRDGVKHSAIDYPLENAADDVIPLIDRYEPVYPDGWTHEGPM 1262 Query: 1500 VLRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSG 1559 A G S + IAP Q L + G Sbjct: 1263 AAEAGASAHGASQTQSIAP----AQDVRTGADVVAAVADTAAQDRALAAVGEPLVLVAHG 1318 Query: 1560 EGRVKGSGDAQFVALQGSRNGESLLADNMQDGVRIARDN---PDSGVVVRIAGEGRPWNP 1616 D R+ + + V+ +G P Sbjct: 1319 AAPHHNRPDGAPSYFVMLRDAQGHERTEWGPALERVVAECGLQPGDVLGANSGANISKRP 1378 Query: 1617 GAITGGRVWGDIPDNSVQ-----PGAGNGEPVTAEVLAQRQAEEAIRRETERRADEIVRK 1671 +I P+ V + AQ + ++ + + Sbjct: 1379 VSIRVKVRDTADPERIVDKLVGVQPQELLRAARETLRAQGLLSLSSAAPVDQAPVDAMAV 1438 Query: 1672 MAENKPDLPDGKTEQAVREIAGQERDRAAITEREAALPEGVLREPQRVREAVREIARENL 1731 A P D Q V E E + A V EP+ + A R++ + Sbjct: 1439 FAPIVPVKNDAFGGQRVCEALATEAPVTVQIKGHDAADLIVGIEPRELLRAARQVLGDAP 1498 Query: 1732 LQERLQQMERDMVRDLQKEKTLG 1754 + L + E+++ Sbjct: 1499 ARALLS----AAQTQPESEQSIA 1517 >UniRef50_Q84GD9 TraA n=5 Tax=Corynebacterium glutamicum RepID=Q84GD9_CORGL Length = 1164 Score = 329 bits (843), Expect = 6e-88, Method: Composition-based stats. Identities = 173/1071 (16%), Positives = 337/1071 (31%), Gaps = 135/1071 (12%) Query: 1 MMSIAQVRSAGSAGNYY-----------TDKDNYYVLG--SMGERWAGR--------GAE 39 M++IA++ G + YY + D+YY W A Sbjct: 1 MLTIAKMH--GESVAYYESTVTTSDDKISSPDDYYSEDGTQPATAWIQARTEAQATTVAT 58 Query: 40 QLGLQ--GSVDKDVFTRLL-EGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAML 96 LG++ V+ + + P G L R S PG+DLTF APKSVS++ L Sbjct: 59 ALGVKNGAQVNGADVGQWFNQAIAPSGHKLGRAPKSSG--VPGFDLTFCAPKSVSLIWGL 116 Query: 97 GGDKRLID----AHNQAVDFAVRQVEALASTRVMTDGQSETV----LTGNLVMALFNHDT 148 D + AH++AV A+ + A D ++ L + H T Sbjct: 117 TDDTDVRSTVDRAHHRAVTTALSYLSEHAGYTRRADDHDRSMMIIDRVEALSGVRYEHRT 176 Query: 149 SRDQEPQLHTHAVVANV-TQHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQ 207 SR +P LH H ++AN +G+W+TL ++Y A G +Y+ L+E+ Sbjct: 177 SRAGDPHLHAHVLLANKQLCRDGKWRTLDG---------VSLYHEARAAGTIYQAVLREE 227 Query: 208 V-EALGYETEVVGKHGMWEMPGVP----VEAFSGRSQTIREAVGEDASLKSRDVAALDTR 262 + LG HG E+ G+ +E FS R++ I + ++ + + Sbjct: 228 LSRTLGVAW-ADTVHGCAEIIGLDDRGLIEDFSTRAREIDQWAADNGVGSDAAFERMGQK 286 Query: 263 KSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQ 322 K++Q D ++ ++E Q K R + L+P S + V + Sbjct: 287 KTRQVKDLDMPLSELEQNWKAR-------VAETSARKFVEALSPHSHSPQSVALP-TVDE 338 Query: 323 AIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAI---------------SR 367 + ++ + FT DV+ +LP E ++ Sbjct: 339 VLDAVTCERSTFTRADVVEAATELLPVGAVTAEEIYDTVERLADQVCGGQVAWTVTPEKD 398 Query: 368 EQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVP--RTAGYSDAVSV 425 Q+ RE + V++E++ + V V +A ++A+ Sbjct: 399 RQVDRSAREGSQRFTSEAVVEEVNRGIDLATTVTGRGVDASMIAPVEGQLSADQAEAMRA 458 Query: 426 LAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNM-KQDERLSG 484 + R ++V G AG+ + + G++V +A ++ M +D S Sbjct: 459 VVSSRYLASVVIAPAG-AGKTSSLKAARAAWEQAGKQVVGLAPTGKAADVMVGEDVAHSS 517 Query: 485 ELITGRRQLLEGMAFTP---------GSTVIVDQGEKLSLKETLTLLDGAARHNVQVLIT 535 + + +E ++VD+ +S E + +L+ A + +V++ Sbjct: 518 STLARVLRRVEDQDVEQAVATLGWSTDHVIVVDEAGMVSTPEMVRVLELAHAADARVVLV 577 Query: 536 DSGQRTGT----GSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAG------ 585 + G G L + + + ++ + +R L Sbjct: 578 GDPYQYGAVKARGGLLATLAHEVPDAVELREVFRQHDEKERAASKRLRTGVLPDVERAAD 637 Query: 586 ----------------------DFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGV 623 + V AG++S+ S L +A + + GV Sbjct: 638 FYAGAGRLHAGSVTAMLDDALAGWRGDVAAGKDSLLVASTHDYVDALNRAAQQSMIAAGV 697 Query: 624 LGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTL 683 + E +L + R + R+ R+ ++ + L Sbjct: 698 VDGAEAIELSLGQYAHVGDTILTRRNDYE--LTTSSGDVVRNGQRWQVEAIEGDGFVLAR 755 Query: 684 R-DAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSE 742 R D T + + L L A G + V RV G V + Sbjct: 756 RLDDTAATVRLHPAYLAEHVQLGYASTGHAAQGATVDV------ARVVAG----VGQIDR 805 Query: 743 DAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPG--HSVSDSATVFASVTQMAMDNA 800 + V + E L +++S + +G V S + + + + Sbjct: 806 AGVYVPLTRGREANYLYMAESMPGDSETGHGVVTATQRRESAQYARDLLVQAATRSHSDQ 865 Query: 801 TLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSAL 860 + + + R R S + + + + ++ + + Sbjct: 866 SPHEVHRQARLDWGLSRMSRNVPTGESPFRGTRMAQVADQRAAQRLERVQEFYATTNATA 925 Query: 861 HTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYV 920 + + + + S EL ++ QI Sbjct: 926 RVKQAAKEAAQQRQSRKRTDTLTSTSGVDQPFSADYLSMSPEELSETMHKQIHESAQRKK 985 Query: 921 DVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTS 971 + L +E E S LR + E +R + ++ Sbjct: 986 TPHEEERERLTAKIEHFEQEVSDLRVQVSELERARRDADRELSQANVRMND 1036 Score = 159 bits (402), Expect = 8e-37, Method: Composition-based stats. Identities = 139/871 (15%), Positives = 249/871 (28%), Gaps = 113/871 (12%) Query: 851 TAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAA-EGTGFTELGGEIN 909 A+S + + A + L V ++ F+ D++ A E+ + Sbjct: 319 EALSPHSHSPQSVALPTVDEVLDAVTCERSTFTRADVVEAATELLPVGAVTAEEIYDTVE 378 Query: 910 AQIKR------------GDLLYVDVAKGYGTGLLVSRASYEAEKSILRHI--LEGKEAVM 955 + VD + G+ S A E + + G+ Sbjct: 379 RLADQVCGGQVAWTVTPEKDRQVDRSAREGSQRFTSEAVVEEVNRGIDLATTVTGRGVDA 438 Query: 956 PLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPES 1015 ++ V G+ L++ Q A R ++ + +VV AG GKT+ +A +A E Sbjct: 439 SMIAPVEGQ----LSADQAEAMRAVVSSRYLASVVIAPAGAGKTSSLKAARAA----WEQ 490 Query: 1016 ERPRVVGLGPTHRAVGEM--RSAGVDAQTLASFLHDTQLQQRSGETP---DFSNTLFLLD 1070 +VVGL PT +A M + TLA L + Q ++ + ++D Sbjct: 491 AGKQVVGLAPTGKAADVMVGEDVAHSSSTLARVLRRVEDQDVEQAVATLGWSTDHVIVVD 550 Query: 1071 ESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIV 1130 E+ MV +M R L A R V GD Q A+ D ++E+ Sbjct: 551 EAGMVSTPEMVRVLELAHAADARVVLVGDPYQYGAVKARGGLLATLAHEVPDAVELREVF 610 Query: 1131 RQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEA 1190 RQ E A + V + A Sbjct: 611 RQHDEKERAASKRLRTGVLPDVER-----------------------------------A 635 Query: 1191 QQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREK 1250 G + + + + G ++ +V ++ LN Sbjct: 636 ADFYAGAGRLHAGSVTAMLDDALAGWRGDVAAGKDSL-LVASTHDYVDALNRAAQQSMIA 694 Query: 1251 AGEL-GKEQVMVPVLNTANIRDGELRRLSTWE-THRDALVLVDNVYHRIAGISKDDGLIT 1308 AG + G E + + + A++ D L R + +E T V+ + ++ I D ++ Sbjct: 695 AGVVDGAEAIELSLGQYAHVGDTILTRRNDYELTTSSGDVVRNGQRWQVEAIEGDGFVLA 754 Query: 1309 LQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVS 1368 + + + +AE V L T G + + V V + Sbjct: 755 RRLDDTAATVRLHPAYLAEHVQLGYASTGHAAQGATVDVAR----------VVAGVGQID 804 Query: 1369 GDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAG 1428 V + + ++ + R+ Sbjct: 805 RAGVYVPLTRGREANYLYMAESMP---------------GDSETGHGVVTATQRRESAQY 849 Query: 1429 FESAYV-ALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLF-- 1485 V A +R +D + V + D + R V E F Sbjct: 850 ARDLLVQAATR-------------SHSDQSPHEVHRQARLDWGLSRMSRNVPTGESPFRG 896 Query: 1486 -STARELRDVAAGRAVLRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLN 1544 A+ AA R Q A ++ AR ++ Q + D ++G+ Sbjct: 897 TRMAQVADQRAAQRLERVQEFYATTNATARVKQAAKEAAQQRQSRKRTDTLTSTSGVDQP 956 Query: 1545 PLTTDDGNGLRGFSGEGRVKGSGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVV 1604 S + AQ E L A ++ + Sbjct: 957 FSADYLSMSPEELSETMHKQIHESAQRKKTPHEEERERLTAKIEHFEQEVSDLRVQVSEL 1016 Query: 1605 VRIAGEGRPWNPGAITGGRVWGDI----PDNSVQPGAGNGEPVTAEVLAQRQAEEAIRRE 1660 R + A + Q G E L Q + R + Sbjct: 1017 ERARRDADRELSQANVRMNDLDNRIHAKEVEREQRGFLAKAFKPREGLEQIEQLLIERDQ 1076 Query: 1661 TERRADEIVRKMAENKPDLPDGK-TEQAVRE 1690 + D+ K+AE K DL + QA ++ Sbjct: 1077 QQVHRDQCEHKVAEVKADLDQARVAYQAAQD 1107 >UniRef50_Q8RMJ7 TraA n=3 Tax=Corynebacterium RepID=Q8RMJ7_CORDI Length = 1116 Score = 326 bits (835), Expect = 5e-87, Method: Composition-based stats. Identities = 142/899 (15%), Positives = 277/899 (30%), Gaps = 137/899 (15%) Query: 1 MMSIAQVRSAGSAGNYYTDK-------DNYYVLG--SMGERW--AGRGAEQLGLQGS--- 46 M++IA++ + A YY D+YY W + +E G+ Sbjct: 1 MLTIAKMGAHSVA--YYQSTVDENRGPDSYYSEDGKQPASVWLRGEKLSEVSAFLGTDNG 58 Query: 47 --VDKDVFTRLLE-GRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLI 103 V P GA L + PG+DLTF APKSVS++ +G D + Sbjct: 59 AIVSGKTVENWFNKAVAPSGAGLGNAPRKDS--VPGFDLTFCAPKSVSLLWGMGADSDVR 116 Query: 104 ----DAHNQAVDFAVRQVEALASTRVM-----TDGQSETVLTGNLVMALFNHDTSRDQEP 154 +AH AV A+ + A + + + H TSR +P Sbjct: 117 GIVDEAHQAAVSQALDYLSEHAGYTRKQVKEPAGKRLVVEKLAGISGVKYEHRTSRAGDP 176 Query: 155 QLHTHAVVANV-TQHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQV-EALG 212 +H+H ++AN +G+ +TL ++Y A G +Y+ ++E + + LG Sbjct: 177 HVHSHVLLANKQLCRDGKVRTLDG---------VSLYHEARAAGMVYQATVREILSQKLG 227 Query: 213 YETEVVGKHGMWEMPGVP----VEAFSGRSQTIREAVGEDA---SLKSRDVAALDTRKSK 265 E V +G E+ G+ + ++S R++ I + ++ +A TR++K Sbjct: 228 VEFGDV-VNGCAEIVGLDDPELIASYSTRAREIDQWQADNGLETRAAYERIAQKITRRTK 286 Query: 266 QHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIA 325 P ++ E G +R + A L A + D +Q +A Sbjct: 287 DTDTPLEELEIEWAR-AEHGAQVREFV------AGLEPKNEADARESSEDFLPKPSQILA 339 Query: 326 GLSERKVQFTYTDVLARTVGILPPENGVIER----ARAGIDEAI-----------SREQL 370 ++ + FT DV + ++ P E +D A+ +L Sbjct: 340 EVAAERSTFTRADVAEKVAELIRPGAISPEDMTVTVEGLVDAALAAHGTWSVTPEKSREL 399 Query: 371 IPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVP--RTAGYSDAVSVLAQ 428 RE + + V+DE+ + VT + V + +DA+ + Sbjct: 400 DSTQREGSQKYTTVEVVDEVERGVDMATARVERGVTAESIQPVEGELSPAQADAMRAVVG 459 Query: 429 DRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNM-KQDERLSGELI 487 ++V G AG+ + G+ V +A ++ M ++ I Sbjct: 460 SDYLASVVVAPAG-AGKTSSLKSAHHAWNMAGKHVIGLAPTGKAADVMVGENVADESMTI 518 Query: 488 TGRR---------QLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSG 538 + + + V+VD+ +S +T+ +L+ A +V+ Sbjct: 519 ARAFVGTDDLIPEHTAVKLGWNRDTVVVVDEAGMVSNPDTIRVLETATAAGARVVFVGDP 578 Query: 539 QRTGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESV 598 ++ A + + + D R Sbjct: 579 EQYSAVKARSGLLA---TLSHELPDAVELREVFRQRDAGERE------------------ 617 Query: 599 AQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRP--GMVM 656 L E + + W R + Sbjct: 618 ---------------------ASKWLRGGEEADVSRAAEWYMQNKRLHAGSVTAMMDDAL 656 Query: 657 EQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGE 716 W +T + + ++ T +T +A + ++ L + + G+ Sbjct: 657 AGWRDDTAAGKQSLLVAATRD--QVTALNAAAQKIRAERGEINPEHRLGLSDGLTAGVGD 714 Query: 717 RLRVTGKIPGL------RVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTAL-K 769 + L V G R V S+ +D + AT+ ++ + Sbjct: 715 VILTRRNDAKLVTSNGDVVRNGQRWVVDSIGKDGSITARRCDDDLATVTLNRDYLDKHTQ 774 Query: 770 LENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLA 828 L + + ++ + R LY + + E Sbjct: 775 LGYAATGHSSQGATVDVARVVAGVGNLDKSSVYVPMTRGREGNFLYIAETQPGDTETGH 833 Score = 153 bits (386), Expect = 6e-35, Method: Composition-based stats. Identities = 82/462 (17%), Positives = 152/462 (32%), Gaps = 60/462 (12%) Query: 876 ESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRA 935 + + ++ L+ A + + E E+++ + G Y V V A Sbjct: 367 SPEDMTVTVEGLVDAALAAHGTWSVTPEKSRELDSTQREGSQKYTTVEVVDEVERGVDMA 426 Query: 936 SYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAG 995 + E+ + ++ V GE L+ Q A R ++ + +VV AG Sbjct: 427 TARVERGV----------TAESIQPVEGE----LSPAQADAMRAVVGSDYLASVVVAPAG 472 Query: 996 VGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGV--DAQTLASFLHDTQLQ 1053 GKT+ ++ A NM V+GL PT +A M V ++ T+A T Sbjct: 473 AGKTSSLKSAHHAWNMA----GKHVIGLAPTGKAADVMVGENVADESMTIARAFVGTDDL 528 Query: 1054 QRSG---ETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQ 1110 + +T+ ++DE+ MV N D R A G R V GD +Q A+ Sbjct: 529 IPEHTAVKLGWNRDTVVVVDEAGMVSNPDTIRVLETATAAGARVVFVGDPEQYSAVKARS 588 Query: 1111 PFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAW 1170 + D ++E+ RQ + Sbjct: 589 GLLATLSHELPDAVELREVFRQRDAGEREASKWLRGG----------------------- 625 Query: 1171 APEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIV 1230 +EA ++ A + M + + + + T ++ +V Sbjct: 626 ------------EEADVSRAAEWYMQNKRLHAGSVTAMMDDALAGWRDDTAAGKQSL-LV 672 Query: 1231 THLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLN-TANIRDGELRRLSTWETHRDALVL 1289 + LN+ +R + GE+ E + TA + D L R + + + Sbjct: 673 AATRDQVTALNAAAQKIRAERGEINPEHRLGLSDGLTAGVGDVILTRRNDAKLVTSNGDV 732 Query: 1290 VDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTL 1331 V N + DG IT + + + ++ + T Sbjct: 733 VRNGQRWVVDSIGKDGSITARRCDDDLATVTLNRDYLDKHTQ 774 Score = 72.3 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 56/399 (14%), Positives = 109/399 (27%), Gaps = 22/399 (5%) Query: 1334 PDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAV-SGDSVTLSDGQQT-REIRPGQEQAE 1391 D I D T + W V ++ S+T + ++ + Sbjct: 713 GDVILTRRNDAKLVTSN--GDVVRNGQRWVVDSIGKDGSITARRCDDDLATVTLNRDYLD 770 Query: 1392 QHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVY----- 1446 +H L YA T H +QGA+ A + G S YV ++R ++ +Y Sbjct: 771 KHTQLGYAATGHSSQGATVDVARVVAGV-----GNLDKSSVYVPMTRGREGNFLYIAETQ 825 Query: 1447 ---TDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQ 1503 T+ G I A D+ RE + + +D + V + Sbjct: 826 PGDTETGHGQVSQIIRRESDEYARDLLVSAGMREQGDKTPQALFGQAKQDWELTKLVNQP 885 Query: 1504 AGLAGGDSP--ARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGEG 1561 + + R + A A A + GN Sbjct: 886 SQTDTDNPFFGTDMGEYMRSFAAKREARFADFHARAQANNADEVPEPESGNEYSVTPSND 945 Query: 1562 RVKGSGDAQFVALQGSRN--GESLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPGAI 1619 V+ GE A+ + + D+ V + G + Sbjct: 946 AVERIDAEIERVNTQLETLRGEYDQANQQVEQLGQQYSKQDAVVREFEDTKNSRGFFGRL 1005 Query: 1620 TGGRVWGDIPDNSVQPGAGNGEPVTAEVLAQRQAEEAIRRETERRADEIVRKMAENKPDL 1679 G + D ++ V R + R+ + DE+ + ++ + Sbjct: 1006 RHGNNDQALLDEAITVRDKVAASYDQAV-DYRDSFTDPIRQLKTELDELRSQRSDEQALQ 1064 Query: 1680 PDGKTEQAVREIAGQERDRAAITEREAALPEGVLREPQR 1718 ++ + + A ++AA + Sbjct: 1065 NTLDVLDSLGISTTADDEMLARFHQQAATDSDYDSDQDN 1103 >UniRef50_B3GW66 TraA Protein n=3 Tax=Corynebacterium RepID=B3GW66_9CORY Length = 1492 Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats. Identities = 138/845 (16%), Positives = 252/845 (29%), Gaps = 122/845 (14%) Query: 39 EQLGLQGSVDKDVFTRLLEGRLPDGAD-----LSRMQDGSNRHRPGYDLTFSAPKSVSMM 93 E+ L ++ ++ F G P ++ ++D + G+DLTFS KSVS++ Sbjct: 132 ERAELVQNIGREFFIE-EHGVEPQSGREIVNWVNGLKDNVRQSVSGFDLTFSPAKSVSVV 190 Query: 94 AMLGGDK---RLIDAHNQAVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSR 150 L ++ R+ H+QAV A+ E E V T ++ + F H +R Sbjct: 191 WALSDEETARRIEKLHHQAVKEAMAWAEDNVFFTRSGKQGREQVKTKGVIASEFKHYDTR 250 Query: 151 DQEPQLHTHAVVANVTQH-NGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVE 209 +P LH+H +V+N Q +G W +L S + K A Y L + Sbjct: 251 AGDPDLHSHVLVSNKVQAEDGRWLSLDSKALHK---------QAQAISHRYDSILNTLLS 301 Query: 210 -ALGYETEVVG----KHGMWEMPGVPV---EAFSGRSQT--------IREAVGEDASL-- 251 +GY K WE+ GV E+FS R + + E V + Sbjct: 302 NDMGYSFTARDHGVNKEPTWEIEGVSESLMESFSKRRRGAEPVYKRLVDEFVAARGTTPN 361 Query: 252 -----KSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTP 306 + A L+TR +K+ + ++ + + + + Q + Sbjct: 362 SVEVGRLWQQAILETRDAKREPESLSELRAGWKNEVSARDNGQEELASIAQLSANSGHDE 421 Query: 307 GPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGV----IERARAGID 362 P + + +A ++ R+ F + V G L + A + Sbjct: 422 RPLFDAHEHLSGLIDDVLATVTRRRSYFRTSHVATAAGGKLQGYRFASLAERDLIHATVV 481 Query: 363 EAISREQLIPLDR----------------------EKGLFTSGIHVLDELSVRALS---- 396 EAI R++ I L+ + LFT+ + E A Sbjct: 482 EAIVRDKAIALNDFDVLELPESLKNTAGQARDTRADSELFTTQDILDTEDKALAALNEPV 541 Query: 397 -----RDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAE 451 + + E AG L A G G G+ + Sbjct: 542 AAFAPSRAIDEALDGHEREAGFRLNAGQESMARYLLTCGTLAATGVGPAG-TGKTASMRL 600 Query: 452 LVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTP---------- 501 + + +GR V +A ++ + +D I G T Sbjct: 601 VANVWANEGRNVIGLAPSAQAADVLSEDLGFDAFTIDKLTYTWRGNHPTKPGHSLKDLPV 660 Query: 502 ----GSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGT---GSALMAMKDAG 554 G +IVD+ S +LL+ A V ++ G G AM +A Sbjct: 661 SINAGDMIIVDEAGMASTPNIGSLLEIAEEAGAVVRFIGDHKQLGAVENGGLFGAMVNAA 720 Query: 555 VNTYRWQGGEQR--------------------------PATIISEPDRNVRYARLAGDFA 588 T R ++ R+ + A D+ Sbjct: 721 ERTDNQLSEVVRFGGDREQSATSLRLREGDRSTFDFYSERGWVNGGARSDMLDKAAADYL 780 Query: 589 ASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRD 648 A + +G+ S+ + R+ A L + IR+ V+ + + R Sbjct: 781 ADISSGKTSLLIAATNRDVAELNETIRAHYIAHSVVDTTVEAQLSRGEKAGLGDTILARK 840 Query: 649 MYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPE 708 + + + + G+ + + + L Sbjct: 841 NQTFYDDETATSTRINNGTLMTVTGIAENGSITARNQTTGDELCLPADYVHDNVQLGYAA 900 Query: 709 KMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTAL 768 + A G + T + V L VA + D + Sbjct: 901 TVHRAQGSTVDCTRAVIDHHVDRAG-LYVALTRGKIANHIYAVTEHQLDELAEDGHYHYQ 959 Query: 769 KLENG 773 +++ Sbjct: 960 GIDHA 964 Score = 224 bits (570), Expect = 3e-56, Method: Composition-based stats. Identities = 129/875 (14%), Positives = 250/875 (28%), Gaps = 167/875 (19%) Query: 923 AKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPL------MERVPGELMEKLTSGQRAA 976 + L ++ + E L + E A P ++ E +L +GQ + Sbjct: 513 DTRADSELFTTQDILDTEDKALAALNEPVAAFAPSRAIDEALDGHEREAGFRLNAGQESM 572 Query: 977 TRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA 1036 R +L G AG GKT R V + +E V+GL P+ +A + Sbjct: 573 ARYLLTCGTLAATGVGPAGTGKTASMRLVANV----WANEGRNVIGLAPSAQAADVLSED 628 Query: 1037 -GVDAQTLASFLHDTQLQQRSGETPDF--------SNTLFLLDESSMVGNTDMARAYALI 1087 G DA T+ + + + + + ++DE+ M ++ + Sbjct: 629 LGFDAFTIDKLTYTWRGNHPTKPGHSLKDLPVSINAGDMIIVDEAGMASTPNIGSLLEIA 688 Query: 1088 AAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRD 1147 G GD QL A+ G F + + E+VR + ++ SL R+ Sbjct: 689 EEAGAVVRFIGDHKQLGAVENGGLFGAMVNAAERTDNQLSEVVRFGGDREQSATSLRLRE 748 Query: 1148 VERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMT 1207 +R+ +G Sbjct: 749 GDRS--------------------------------------TFDFYSERGWVNGGARSD 770 Query: 1208 LYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELG---KEQVMVPVL 1264 + + DY + + +L++ N D LN I + + Q+ Sbjct: 771 MLDKAAADYLADI-SSGKTSLLIAATNRDVAELNETIRAHYIAHSVVDTTVEAQLSRGEK 829 Query: 1265 NTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREA 1324 + + ++ ++N ++G IT ++ L P + Sbjct: 830 AGLGDTILARKNQTFYDDETATSTRINNGTLMTVTGIAENGSITARNQTTGDELCLPADY 889 Query: 1325 VAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSG--DSVTLSDGQQTRE 1382 V + V L T+ G + T++ + ++ + + Q E Sbjct: 890 VHDNVQLGYAATVHRAQGSTVDCTRAVIDHHVDRAGLYVALTRGKIANHIYAVTEHQLDE 949 Query: 1383 IRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQH 1442 + Q ID A R Sbjct: 950 LAEDGHYHYQGIDHA----------------------PSAR------------------- 968 Query: 1443 VQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLR 1502 + AI+ A +V A + + + ++ Sbjct: 969 --------DVFDKAISRDTTPKAAREVI-----------------AEVVDEQTSPDRMMG 1003 Query: 1503 QAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGEGR 1562 + ++ FI P LP G + T D G + Sbjct: 1004 LWLMGKDEATNDFIDA--YLPDWIDTLP---------GDLSRKIETSDDGTEPIRHGWVK 1052 Query: 1563 VKGSG-------DAQFVALQGSRNGESLLADNMQDGVRI----ARDN--PDSGV-VVRIA 1608 + +G DA + + + L+ + + +R+ R+ P SG + + Sbjct: 1053 LIDAGIDPRTVMDAATRDIDNAHDPARLIRYRLDEQLRLRDTGKRNQLPPVSGQTDIELD 1112 Query: 1609 GEGRPWNP------GAITGGRVWGDIPDNSVQPGAGNGEPVTAEVLAQRQAEEAIRRETE 1662 R NP +TG + + SV E L ++A R + Sbjct: 1113 TWLRTHNPYDRAETTRLTGKEHNLNRLNQSVLVEHARFASSKVESLTWQEASITTRLHED 1172 Query: 1663 RRADEIVRKMAENKPDLPDGKT---EQAVREIAG---QERDRAAITEREAALPEGVLREP 1716 + A + + L G+ EQA+ + + +E A E + L E R P Sbjct: 1173 KDAAANEVQADYQQVVLDAGRIRAYEQAMADHSAALREEETARADIEHQRLLAEDYTR-P 1231 Query: 1717 QRVREAVREIARENLLQERLQQMERDMVRDLQKEK 1751 R ++ Q+R+ + + + Q+ K Sbjct: 1232 VAERAYDHDVDGYGTYQQRINHAHKRLEQAQQRRK 1266 >UniRef50_Q0ZKG3 Putative uncharacterized protein n=1 Tax=Corynebacterium sp. L2-79-05 RepID=Q0ZKG3_9CORY Length = 1346 Score = 317 bits (811), Expect = 3e-84, Method: Composition-based stats. Identities = 146/991 (14%), Positives = 302/991 (30%), Gaps = 141/991 (14%) Query: 70 QDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKR---LIDAHNQAVDFAVRQVEALASTRVM 126 ++ + G DLTFS KSVS++ LG D+ + H QAV+ +++VE Sbjct: 172 KNRVKQPTSGVDLTFSPAKSVSLVWALGDDETRQTIEKIHQQAVEDTLKEVEEEFLFTRT 231 Query: 127 TDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDK--VGKTG 184 + ++ + F H +R +P LHTH +++N Q + L D+ ++ Sbjct: 232 GGRGERVIKARGMIASTFMHYDTRAGDPDLHTHCLISNKVQAARGQQGLDDDQADKWRSL 291 Query: 185 FIENVYANQIAFGRLYREKLKEQV-EALGYETEVV----GKHGMWEMPGVPVEAF---SG 236 + N G+ Y+ K+ + + + L E GK +WE+ G+ E S Sbjct: 292 DARYLLKNSARIGQRYQVKMAQALGQELDLEFYERESDEGKAPVWEVAGIDEELINSASQ 351 Query: 237 RSQTIREAVGEDAS---------------LKSRDVAALDTRKSKQH-VDPEIKMAEWMQ- 279 R R E A K A L+TR +K+ EW + Sbjct: 352 RRAGARPVYEEYAEKYRATHGHYPDMRTRNKLWQAAILETRDAKKPARSLAEHREEWKEL 411 Query: 280 TLKETGFDIRAYRDAADQRADLRTLTPGPAS-QDGPDVQQAVTQAIAGLSERKVQFT--- 335 D+ + R A S + + + +A+ +R+ +F Sbjct: 412 LGGGQELDLDSLRQRGKAYASRSAFPADVLSDEYVFAIAELAEKAVEDTRQRRAEFNIRH 471 Query: 336 -----------------------YTDVLARTVGILPPENGVIERARAGIDEAISREQLIP 372 +VL L E GV++ + QLI Sbjct: 472 LETSVSMHLTNWKFDNETHSDHVRQEVLEYAKKHLLTELGVVDSSHLPAALVREDGQLIT 531 Query: 373 LDREKGLFTSGIHVLDELSVRALSRDIMK---------QNRVTVHPEKSVPRTAGYSDAV 423 + + + + + +E V A ++ Q + G + Sbjct: 532 AEHDGITYAAHATLEEEHKVLASLNELTGYTISDEAVDQALQRNVEKHGFALNDGQAKMA 591 Query: 424 SVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLS 483 L LA G G G+ +A + + +G +V +A R+ + QD ++ Sbjct: 592 HSLLVTGEKLACAVGPAG-TGKTASMAVVADAWKNEGHKVLGLAPSARAAQQLGQDANIT 650 Query: 484 GELITGRRQLLE-------------GMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNV 530 + + G+ G ++VD+ + + L + A Sbjct: 651 AQTLAALTYRWRGVIGDSPRDINNLGVEINAGDMLLVDEAGMATTADLAALTEIADETGA 710 Query: 531 QVLITDSGQRTGT---GSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDF 587 + + + G + + R +++ D + R + Sbjct: 711 VIRLVGDPHQLDAVETGGLFRTLVRQ--SNAVELDTVMRMGADVAQADSSTRLRHGDVNA 768 Query: 588 AASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLR 647 + V G ++ +A+ + L G + + + + + + Sbjct: 769 LDLYRERG----WVHGGNRHDMIAEAVEAHLGDLGA-EIDSIVIASRKEDVNTANTLIQS 823 Query: 648 DMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRP 707 ++ G+V S + Sbjct: 824 ELIERGIV------------------------------------------EGFSPGVAVS 841 Query: 708 EKMPVADGERLRVTGKIP---GLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSP 764 V G+ + G RV G+R +VA + +D V + T+ + + Sbjct: 842 GDARVHVGDTILTRKNDTLPSGRRVLNGERFEVAGLLDDGSLAVKELNGKNKTMVL-PAD 900 Query: 765 FTALKLENGWVETPGHSVSDSATVFASV-TQMAMDNATLNGLARSGRDVRLYSSLDETRT 823 + ++ G+ T + + ++ A + R+ +Y + D Sbjct: 901 YVREHVQLGYASTVYRAQGITVENARAIVGAETDRRALYVAMTRAKWQNHVYVADDLPF- 959 Query: 824 AEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFS 883 + A + + E + + ++ ++ A + ++L + Sbjct: 960 -DFDAEQAHWHMSGEDKPDYNDILERIVLRDSGQRSASDQHRELVNKAESTQQRRELFST 1018 Query: 884 MVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYE--AEK 941 D+L GE+ A + G V + + +++A E Sbjct: 1019 AADMLHTDYRHEVVEPAVIRALGELPATMTNGLDHDQAVERISTSIQRLNQAGVNGLREL 1078 Query: 942 SILRHILEGKEAVMPLMERVPGELMEKLTSG 972 S LEG E V +++ + + T Sbjct: 1079 SFATDGLEGAEDVGAVIQHRLEQQRPEATPE 1109 Score = 160 bits (404), Expect = 5e-37, Method: Composition-based stats. Identities = 92/473 (19%), Positives = 165/473 (34%), Gaps = 64/473 (13%) Query: 884 MVDLLTEAKSFAAEGTGFTELGGEINAQI-KRGDLLYVDVAKGYGTGLLVSRASYEAEKS 942 ++L AK G + A + + G L+ + + + A+ E E Sbjct: 495 RQEVLEYAKKHLLTELGVVDSSHLPAALVREDGQLITAE----HDGITYAAHATLEEEHK 550 Query: 943 ILRHILEG------KEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGV 996 +L + E EAV ++R + L GQ +L T ++ G AG Sbjct: 551 VLASLNELTGYTISDEAVDQALQRNVEKHGFALNDGQAKMAHSLLVTGEKLACAVGPAGT 610 Query: 997 GKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM-RSAGVDAQTLASF-------LH 1048 GKT V A ++E +V+GL P+ RA ++ + A + AQTLA+ + Sbjct: 611 GKTASMAVVADA----WKNEGHKVLGLAPSARAAQQLGQDANITAQTLAALTYRWRGVIG 666 Query: 1049 DTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAP 1108 D+ + + + L+DE+ M D+A + G GD QL A+ Sbjct: 667 DSPRDINNLGVEINAGDMLLVDEAGMATTADLAALTEIADETGAVIRLVGDPHQLDAVET 726 Query: 1109 GQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEG 1168 G FR +S + + ++R ++ +A Sbjct: 727 GGLFRTLVRQS--NAVELDTVMRMGADVAQA----------------------------- 755 Query: 1169 AWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTL 1228 S T H L +++ + G D+ EA + D A ++ Sbjct: 756 -----DSSTRLRHGDVNALDLYRERGWVHGGNRHDMIAEAVEAHLGD-----LGAEIDSI 805 Query: 1229 IVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALV 1288 ++ ED N++I + G + V V A + G+ +T Sbjct: 806 VIASRKEDVNTANTLIQSELIERGIVEGFSPGVAVSGDARVHVGDTILTRKNDTLPSGRR 865 Query: 1289 LVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGT 1341 +++ +AG+ D L + N ++ P + V E V L T+ Sbjct: 866 VLNGERFEVAGLLDDGSLAVKELNGKNKTMVLPADYVREHVQLGYASTVYRAQ 918 Score = 88.5 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 64/551 (11%), Positives = 138/551 (25%), Gaps = 64/551 (11%) Query: 1110 QPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLI----------NRDVERALSGLESVK 1159 V + R +L + + + + ++ Sbjct: 617 AVVADAWKNEGHKVLGLAPSARAAQQLGQDANITAQTLAALTYRWRGVIGDSPRDINNLG 676 Query: 1160 PSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGR 1219 T + ++A+ + + + R + Sbjct: 677 VEINAGDMLLVDEAGMATTADLAALTEIADETGAVIRLVGDPHQLDAVETGGLFRTLVRQ 736 Query: 1220 TPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLST 1279 + T++ + + ++ + A +L +E+ V N ++ + Sbjct: 737 SNAVELDTVMRMGADVAQADSSTRLRHGDVNALDLYRERGWVHGGNRHDMIAEAV----- 791 Query: 1280 WETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRV 1339 +A + I+ + + + LI + RV Sbjct: 792 -----EAHLGDLGAEIDSIVIASRKEDVNTANTLIQSELIERGIVEGFSPGVAVSGDARV 846 Query: 1340 GTGDRMRFTKSDR---ERGYVANSVWTVTAV--SGDSVTLSDGQQTREIRPGQEQAEQHI 1394 GD + K+D R + + V + G + + + + +H+ Sbjct: 847 HVGDTILTRKNDTLPSGRRVLNGERFEVAGLLDDGSLAVKELNGKNKTMVLPADYVREHV 906 Query: 1395 DLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNR---- 1450 L YA T + AQG + A A+ G E + YVA++R K VY + Sbjct: 907 QLGYASTVYRAQGITVENARAIVGAE------TDRRALYVAMTRAKWQNHVYVADDLPFD 960 Query: 1451 -------------------QGWTDAINNAVQKGTAHDVFEP---KPDREVMNAERLFSTA 1488 + + +A D K + E + A Sbjct: 961 FDAEQAHWHMSGEDKPDYNDILERIVLRDSGQRSASDQHRELVNKAESTQQRRELFSTAA 1020 Query: 1489 RELRDVAAGRAVLRQAGLAGGDSPARFIA------PGRKYPQPYVALPAFDRNG-KSAGI 1541 L V A G+ PA + L NG + Sbjct: 1021 DMLHTDYRHEVVEPAVIRALGELPATMTNGLDHDQAVERISTSIQRLNQAGVNGLRELSF 1080 Query: 1542 WLNPLTTDDGNGLRGFSGEGRVKGSGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDS 1601 + L + G + + + V L + + + + RI Sbjct: 1081 ATDGLEGAEDVGAVIQHRLEQQRPEATPELVVLPPRHDSDDGQLYDWAEAARIDLAEDKP 1140 Query: 1602 GVVVRIAGEGR 1612 + + Sbjct: 1141 RQLRPVDLPLP 1151 >UniRef50_A5ESN8 Putative ATP-dependent exoDNAse n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5ESN8_BRASB Length = 918 Score = 315 bits (806), Expect = 1e-83, Method: Composition-based stats. Identities = 156/880 (17%), Positives = 279/880 (31%), Gaps = 95/880 (10%) Query: 3 SIAQVRSAGSAGNYYTDKDNYYVL-GSMGERWAG-RGAEQLGLQGSVDKDVFTRLLEGRL 60 S+ + ++ YY YY+ W RG +V + F RL EG Sbjct: 9 SVVATWNVAASSAYYVRGAEYYLGSREPEGVWYAPRGDLGRRDAATVQRQEFARLYEGLG 68 Query: 61 PDGADLSRMQDGSN-RHRPGYDLTFSAPKSVSMMAMLGGD---KRLIDAHNQAVDFAVRQ 116 +G L G R P +DLTFSAP+SVS+ + + L A +AV + Sbjct: 69 ENGQSLITNSGGKAIRRVPAFDLTFSAPRSVSLAWAFADEDLRRNLEAAQERAVRATLAT 128 Query: 117 VEALASTRVMTDGQSETVLTGNLVMALFNHDTSRD---------QEPQLHTHAVVANV-T 166 +E A + L ALF H SR +P LHTHAVV N+ T Sbjct: 129 IEQEAIYARRGKDGAYVEKVA-LTAALFQHGESRPAEHADGRLFGDPNLHTHAVVLNMAT 187 Query: 167 QHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEM 226 + +G L S + ++A G +Y L ++ LG+ + VG++G +E+ Sbjct: 188 RADGTVGALHSTVLRDW---------KMAAGAVYHAALANEMTDLGFGIDRVGRNGTFEL 238 Query: 227 PGVPVEA---FSGRSQTIREAVGEDASLKSRDVAALDTRK---SKQHVDPEIKMAEWMQT 280 G+ +A FS R Q I + + E + A + W + Sbjct: 239 AGIGDQAITYFSARRQEIEKELAEAGTTSGSSAALASAVAKSTRHAKELDADRETVWREA 298 Query: 281 LKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVL 340 + G D R+ G + V A L++ + +++ Sbjct: 299 AQSAGLDGD-----IRAALQQRSAREFVVGDAGRIFAERVATLPAELTQHESVVDRRELV 353 Query: 341 ARTVGILPPENGVIERARAGIDEAISREQLIPLDRE---KGLFTSGIHVLDELSVRALSR 397 + R +D+ ++ + + R+ + +++ + E + A + Sbjct: 354 RSVHAASVGLGLPLSRVDGEVDQLVTSGTFVEIGRDAIGQVRYSTPEMIAIERDLVATAS 413 Query: 398 DIMKQNRVTVHPEKSVPRTAGY----SDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELV 453 + + V + P R+A + A P+ +V +G+ +A +V Sbjct: 414 RLADRRGVGIDPADIKARSAAQGLSAEQTFAAEAATGPNAIVVIEGAPGSGKTTTLAPIV 473 Query: 454 MMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMA--FTPGSTVIVDQGE 511 + G V A R ++QD + + L+ S +IVD+ Sbjct: 474 GAYQAAGHRVIGTATAWRVARAIQQDLNIEARATASWVERLKKGERFLDDKSVLIVDEAG 533 Query: 512 KLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMKDAGVNTYRWQGGEQRPATII 571 LS +E LL R + ++ ++ A G++ R TI+ Sbjct: 534 LLSSREMHALLSEVERAQAKAILVGDRRQLQAIGAG-----PGLDLVVRSVEATRVDTIV 588 Query: 572 SEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTM 631 + D R A DF Q G E+A R+ L+ L Sbjct: 589 RQRDAWARQA--VTDFGTGRANEALDAFQAHGCFEEA---PTYRATLQRIVELRNHARAE 643 Query: 632 TALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQ 691 S L +R+ + E ++ VT + Sbjct: 644 HPDSFTLLIARTNKQVADISRAVRAELKREGVIHSAEASVEAVTPSGQT----------- 692 Query: 692 VVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSED-------- 743 ++ +A G+++R + L V G V +V D Sbjct: 693 ----------------TRIEIAAGDQIRFQLRNDQLGVVNGTVATVTAVHPDPSKEPSTP 736 Query: 744 ---AMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSA-TVFASVTQMAMDN 799 + V+ R +L + T + + + + Sbjct: 737 GNIRIEAVIDRRRISFVPADIADERGRARLGWAYASTVHGAQGMTVDRAVVLLDPRFDRH 796 Query: 800 ATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQ 839 A +R+ + RL + T +E Sbjct: 797 AAYVAASRARDETRLVVDRSQIEALLSSRLPLDRTQQAEP 836 Score = 182 bits (460), Expect = 2e-43, Method: Composition-based stats. Identities = 105/757 (13%), Positives = 228/757 (30%), Gaps = 121/757 (15%) Query: 781 SVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQI 840 + D A + S + ++ SG L S++ ++ K TV E Sbjct: 240 GIGDQAITYFSARRQEIEKELAEAGTTSGSSAALASAVAKSTRHAKELDADRETVWREAA 299 Query: 841 KTRAGETSLETAISHQKSALH------TPAQQAIHLALPVVESKKLAFSMVDLLTEAKSF 894 ++ + + A+ + + + + + + +L+ + Sbjct: 300 QSAGLDGDIRAALQQRSAREFVVGDAGRIFAERVATLPAELTQHESVVDRRELVRSVHAA 359 Query: 895 AAE-GTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSI---LRHILEG 950 + G + + GE++ + G + + G + E+ + + + Sbjct: 360 SVGLGLPLSRVDGEVDQLVTSGTFVEI-GRDAIGQVRYSTPEMIAIERDLVATASRLADR 418 Query: 951 KEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVN 1010 + + + + L++ Q A + V++G G GKTT ++ A Sbjct: 419 RGVGIDPADIKARSAAQGLSAEQTFAAEAA-TGPNAIVVIEGAPGSGKTTTLAPIVGA-- 475 Query: 1011 MLPESERPRVVGLGPTHRAVGEMRSA-GVDAQTLASFLHDTQLQQRSGETPDFSNTLFLL 1069 ++ RV+G R ++ ++A+ AS++ + + GE ++ ++ Sbjct: 476 --YQAAGHRVIGTATAWRVARAIQQDLNIEARATASWVE----RLKKGERFLDDKSVLIV 529 Query: 1070 DESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEI 1129 DE+ ++ + +M + + +A+ GD QLQAI G L + + I Sbjct: 530 DEAGLLSSREMHALLSEVERAQAKAILVGDRRQLQAIGAGPGLDLVVRS--VEATRVDTI 587 Query: 1130 VRQTPEL-REAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLA 1188 VRQ R+AV AL ++ Sbjct: 588 VRQRDAWARQAVTDFGTGRANEALDAFQAHGCF--------------------------- 620 Query: 1189 EAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVR 1248 E P TL + R TL++ N+ ++ + Sbjct: 621 ----------EEAPTYRATLQRIVELRNHARAEHPDSFTLLIARTNKQVADISRAVRAEL 670 Query: 1249 EKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLIT 1308 ++ G + + V + G+ R+ + L ++ ++ +T Sbjct: 671 KREGVIHSAEASVEAVTP----SGQTTRIEIAAGDQIRFQLRNDQLGV---VNGTVATVT 723 Query: 1309 LQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVS 1368 + + +P ++ + Sbjct: 724 AVHPDPSKEPSTP-------------------------------------GNIRIEAVID 746 Query: 1369 GDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAG 1428 ++ E+ + AYA T HGAQG + A+ L +R Sbjct: 747 RRRISFVPADI------ADERGRARLGWAYASTVHGAQGMTVDRAVVLLDPRFDRH---- 796 Query: 1429 FESAYVALSRMKQHVQVYTDNRQGWTDAINN-AVQKGTAHDVFEPKPDREVMNAERLFST 1487 +AYVA SR + ++ D Q + + + + + R + Sbjct: 797 --AAYVAASRARDETRLVVDRSQIEALLSSRLPLDRTQQAEPASAEDRRAQLAGRLSSGH 854 Query: 1488 ARELRDVAAGRAVLR---QAGLAGGDSPARFIAPGRK 1521 + +A L L S R + P K Sbjct: 855 TKTSTIAVIEQAALPVKHADRLHSRPSADRAMQPPTK 891 >UniRef50_D2S894 TrwC relaxase n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S894_9ACTO Length = 1836 Score = 311 bits (796), Expect = 2e-82, Method: Composition-based stats. Identities = 130/779 (16%), Positives = 230/779 (29%), Gaps = 117/779 (15%) Query: 39 EQLGLQGSVDKDVFTRLLEGRLPD-----GADLSRMQDGSNRHRPGYDLTFSAPKSVSMM 93 E+ ++G V + +FT GR P L+R + R GYDLTFS KSVS + Sbjct: 144 ERARIRGEVARGMFTEAY-GRPPADARELSGFLARASRLATRAVAGYDLTFSPVKSVSAL 202 Query: 94 AMLGG---DKRLIDAHNQAVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSR 150 L +R+ AH AV + +E A + G + V T L+ A+F H SR Sbjct: 203 WALAPREVAERVETAHAAAVADTLAWLEKHACFTRLGAGGARQVETTGLIAAVFTHRDSR 262 Query: 151 DQEPQLHTHAVVANVTQ-HNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQV- 208 +P LHTH V+N Q +G W+ + +Y +A Y +L+ + Sbjct: 263 AGDPDLHTHVAVSNKVQTDDGRWRAVDGRV---------LYKANVAASEHYNTRLEAHLV 313 Query: 209 EALGYETEVV-----GKHGMWEMPGVP---VEAFSGRSQTIREAVGEDASL--------- 251 LG GK + E+ GV + +S R Q I G+ A+ Sbjct: 314 AGLGVHFAERPGREPGKRTVREVVGVDSGLLTTWSSRRQAIDVRRGQLAAGFQAEHGRPP 373 Query: 252 ------KSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLT 305 A L+TR++K + + + A R R Sbjct: 374 TTSEAIALAQQATLETREAKHEPRSLAEQRAAWRKQALGVLGSPSDLAAMLDRVLGRAPA 433 Query: 306 PGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGI---- 361 P P+ V+ A +A +S ++ + + V A ++ + Sbjct: 434 PRPSGVPEVWVRSAAATVLATVSGQRASWQFWHVCAEAERLVRAAGLAPGDVDRAVSRVT 493 Query: 362 ---------------DEAISREQLIPLDREK-------GLFTSGIHVLDELSVRALSRDI 399 D + +L D +TS + E + + Sbjct: 494 ETALSPALSVPLGAPDAVVEPPELRRSDGASVYTVAGAQRYTSRAVLDAEALLVTAAGRT 553 Query: 400 MKQNRVTVHPE--------KSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAE 451 + E G + V LA + + G AG+ +A Sbjct: 554 DGRRADPAVVELALLEATANGTELNPGQAQLVRDLAGSGARVQLAVAPAG-AGKTTALAT 612 Query: 452 LVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFT-------PGST 504 L G V +A + ++ + + L+ PG+ Sbjct: 613 LARAWTAGGGTVLGLAPSAVAAAVLRSALAGRCDTLAKLSWSLDAGTPPDWVAGIGPGTL 672 Query: 505 VIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMKD----AGVNTYRW 560 V+VD+ E ++ R V + Q+ +A + + G T Sbjct: 673 VVVDEAGMAGTVELARAVEHILRRGGSVRLVGDPQQLTAVAAGGVLGEIAATHGAVTLTQ 732 Query: 561 QGGEQRPATIISEPDRNVRYARLAGDFAASVK----------------------AGEESV 598 PA + G + + AG++++ Sbjct: 733 LVRFAEPAEAAATVALRDGDTTGLGFYLDVGRVHVGDLVTCAEQAYAAWAADRAAGKDAL 792 Query: 599 AQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQ 658 + A L + R ++ P + + R Sbjct: 793 LLAATREVVARLNERAR----ADRLVHSPGPPGPEVVLADGTRAGAGDAVITRRNDRTLP 848 Query: 659 WN--PETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADG 715 ++ DR+ + V + + + + L + A G Sbjct: 849 LGASDWVKNGDRFTVHAVGGDGALAVVHTGTKRRLTLPAAYVGEHVRLGYAATVHGAQG 907 Score = 130 bits (327), Expect = 4e-28, Method: Composition-based stats. Identities = 71/459 (15%), Positives = 114/459 (24%), Gaps = 25/459 (5%) Query: 770 LENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLAR 829 L G+ G + S + + + + Sbjct: 361 LAAGFQAEHGRPPTTSEAIALAQQATLETREAKHEPRSLAEQRAAWRKQALGVLGSPSDL 420 Query: 830 HPS--FTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDL 887 + +G + + Q+A V + L Sbjct: 421 AAMLDRVLGRAPAPRPSGVPEVWVRSAAATVLATVSGQRASWQFWHVCAEAERLVRAAGL 480 Query: 888 LTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTG----------LLVSRASY 937 A T L ++ + D + G SRA Sbjct: 481 APGDVDRAVSRVTETALSPALSVPLGAPDAVVEPPELRRSDGASVYTVAGAQRYTSRAVL 540 Query: 938 EAEKSILRHI-----LEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQG 992 +AE ++ AV+ L +L GQ R + + R + Sbjct: 541 DAEALLVTAAGRTDGRRADPAVVELALLEATANGTELNPGQAQLVRDLAGSGARVQLAVA 600 Query: 993 YAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGV-DAQTLASFLHDTQ 1051 AG GKTT + A + V+GL P+ A +RSA TLA Sbjct: 601 PAGAGKTTALATLARA----WTAGGGTVLGLAPSAVAAAVLRSALAGRCDTLAKLSWSLD 656 Query: 1052 LQQRSGETP-DFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQ 1110 TL ++DE+ M G ++ARA I GG GD QL A+A G Sbjct: 657 AGTPPDWVAGIGPGTLVVVDEAGMAGTVELARAVEHILRRGGSVRLVGDPQQLTAVAAGG 716 Query: 1111 PFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAW 1170 A + ++VR A + L V V Sbjct: 717 VLGEIAATHGA--VTLTQLVRFAEPAEAAATVALRDGDTTGLGFYLDVGRVHVGDLVTCA 774 Query: 1171 APEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLY 1209 ++ + + Sbjct: 775 EQAYAAWAADRAAGKDALLLAATREVVARLNERARADRL 813 Score = 93.5 bits (230), Expect = 7e-17, Method: Composition-based stats. Identities = 71/463 (15%), Positives = 118/463 (25%), Gaps = 54/463 (11%) Query: 1302 KDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRER------G 1355 + + E G + D R G GD + ++DR Sbjct: 795 AATREVVARLNERARADRLVHSPGPPGPEVVLADGTRAGAGDAVITRRNDRTLPLGASDW 854 Query: 1356 YVANSVWTVTAVSGDS-VTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAI 1414 +TV AV GD + + R + +H+ L YA T HGAQG + Sbjct: 855 VKNGDRFTVHAVGGDGALAVVHTGTKRRLTLPAAYVGEHVRLGYAATVHGAQGVTADTCH 914 Query: 1415 ALEGTEGNRKLMAGFESAYVALSRMKQHVQVY---TDNRQGWTDAINNAVQKGTAHDVFE 1471 + + YVALSR + +Y + + AV TA D+ Sbjct: 915 TVLTGAE------SRQLLYVALSRGRSANHLYLSTVGDGDPHSIITPAAVHPPTATDLLV 968 Query: 1472 PKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPARFIAPGRKYPQPYVALPA 1531 R+ A A A D + +Y Sbjct: 969 AMLARDDAQASAT------------------GARRALADPAGQLRTAAVRYADAL----R 1006 Query: 1532 FDRNGKSAGIWLNPLTTDDGNGLRGFSGEGRVKGSGDAQFVALQGSRNGESLLADNMQDG 1591 F + L G + + + + L Sbjct: 1007 FAAEHRLGPEVAEELEGAAEYLRPGLTAAPAWPTLRGHLALLALSDTDPVAALTTAAGMR 1066 Query: 1592 VRIARDNPDSGVVVRIAGE-------GRPWNPGAITGGRVWGD-------IPDNSVQPGA 1637 + +P + + R+ P P A+ WG + + A Sbjct: 1067 ELDSAADPTAVLDWRLPATGPPGPLPWLPAVPAALAEDPHWGPYLAARAALLTDCAARVA 1126 Query: 1638 GNGEPVTAEVLAQRQAEEAIRRETERRADEIVRKMAENKPDLPDGKTEQAVREIAGQERD 1697 +T RAD V + A + P D + R + Sbjct: 1127 ATAATMTPATAPGWARSLLADDRASLRADLAVWRAATDIPA-DDRRPTGPPRFPTAERSH 1185 Query: 1698 RAAITEREAALPEG-VLREPQRVREAVREIARENLLQERLQQM 1739 +A + + A P I R+ +Q+ Sbjct: 1186 QAQLDQALAVTPTAGRSVWAALADSLDPRIRRDTHWPALAEQL 1228 >UniRef50_B2FKA4 Putative conjugal transfer protein TraA n=1 Tax=Stenotrophomonas maltophilia K279a RepID=B2FKA4_STRMK Length = 926 Score = 311 bits (795), Expect = 2e-82, Method: Composition-based stats. Identities = 133/781 (17%), Positives = 246/781 (31%), Gaps = 150/781 (19%) Query: 23 YYVLGSMGER----WAGRGAEQLGLQG-SVDKDVFTRLLEGRLPDGADLSRMQDGSNR-- 75 YY R W G A +L L+G V ++V +L +G P G L + R Sbjct: 19 YYAGSGPDPRQTLNWGGSLAAELCLEGQPVTREVMEKLGKGFSPTGRPLCKNAGKEARLV 78 Query: 76 ------------------------HRPGYDLTFSAPKSVSMMAMLGGDKR---LIDAHNQ 108 HR G+DLT SAP VS+ L ++ +++AH Q Sbjct: 79 IKTDRWGNVRLDDDGKPMEKWEGGHRVGFDLTISAPGDVSVAFALADEREKLAILEAHRQ 138 Query: 109 AVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ- 167 A A+R +E+ R G+ + T LV A +H ++R+ + LHTH +V V++ Sbjct: 139 ACAVAMRYIESKVEARRGRAGKD-VIDTQGLVWAAADHTSNRNVQCDLHTHHLVFGVSKG 197 Query: 168 HNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGK------- 220 +G W T +Y ++ A LY+ +L ++ALGY + + Sbjct: 198 EDGRWGTFD---------AIEIYRHRHAADHLYKAELYSAMKALGYGIQREREVDVIGRE 248 Query: 221 --HGMWEMPGVPVEAF---SGRSQTIREAVGEDASLKSRDVAALDTRKSKQHVDPEIKMA 275 + + G+ E R Q I + V E + S D A TRK K+ E + Sbjct: 249 TGQILTTIAGIDRELVLQTKTRRQEILDYVKEHPN-ASHDEACKATRKKKEEPPFEQVVK 307 Query: 276 EWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFT 335 +W QT + + P + + + E + F Sbjct: 308 DWQQTFANIARERPDLVPTTQSLKQTQGQHLDP---------HTFDEVLQRMHENEAMFC 358 Query: 336 YTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDRE----------------KGL 379 D++ +G+ E + E ++ L+ + E + Sbjct: 359 EHDLVRE-LGMEFAGQKNAEEILKMVKEFTEQDDLVRVKAEHLHKDDRGTRLARKHREDR 417 Query: 380 FTSGIHVLDELSVRALSRDI------------MKQNRVTVHPEKSVPRTAGYSDAVSVLA 427 F + V E + S++ + + K T A+ L Sbjct: 418 FCATWMVEWEAEIIRRSKERENETDLKLFRSTVDREIAAYEKRKGFTLTEEQKAAIGHLT 477 Query: 428 QDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELI 487 + ++SG G G+ +G+++ +A ++ ++++ + + Sbjct: 478 HGTAGVGVMSGLAG-TGKTTVAEVYKQCFEAEGKQLMGLAVSGKAAAKLEEESGMLCMSV 536 Query: 488 TGR--RQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSG---QRTG 542 + +A T V++D+ ++ +TL L+ ++++ Q Sbjct: 537 AKFFSQLRQGKVALTKNVVVVLDEAGMVATDDTLKLMTYCQGVGAKLVMQGDSDQLQPIA 596 Query: 543 TGSALMA----MKDAGVNTYRWQGGE---------------------------------- 564 G+ + D + R Q Sbjct: 597 AGNGFELAKIALGDTKLTEIRRQKNAGDLITANSFYERDHQGKVKDMRRGHRSRQGTLDM 656 Query: 565 --------QRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRS 616 + I L D+ +E + E LT IR Sbjct: 657 GAQTLRNLKERNCIDDFGTEKQAIKALVDDYLKDPTPMDEKLVLAHTRSEVKALTTGIRK 716 Query: 617 ELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTA 676 L+ QGVL E T ++ L R + + ++ + Sbjct: 717 GLQEQGVLDKEEFTFRSIVKGQ--WEDLTLSRRDRVMFTATNNDLGVINGTEGTVESIRK 774 Query: 677 Q 677 Sbjct: 775 D 775 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 124/696 (17%), Positives = 213/696 (30%), Gaps = 117/696 (16%) Query: 816 SSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIH-----L 870 T +K P VV + +T A + +L Q + Sbjct: 286 HDEACKATRKKKEEPPFEQVVKDWQQTFANIARERPDLVPTTQSLKQTQGQHLDPHTFDE 345 Query: 871 ALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYV---------- 920 L + + F DL+ E A E+ + ++ DL+ V Sbjct: 346 VLQRMHENEAMFCEHDLVRELGMEFAGQKNAEEILKMVKEFTEQDDLVRVKAEHLHKDDR 405 Query: 921 --DVAKGYGTGLLVSRASYEAEKSILRHILEG---------KEAVMPLMERVPGELMEKL 969 +A+ + + E E I+R E + V + L Sbjct: 406 GTRLARKHREDRFCATWMVEWEAEIIRRSKERENETDLKLFRSTVDREIAAYEKRKGFTL 465 Query: 970 TSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRA 1029 T Q+AA + + V+ G AG GKTT V E+E +++GL + +A Sbjct: 466 TEEQKAAIGHLTHGTAGVGVMSGLAGTGKTT----VAEVYKQCFEAEGKQLMGLAVSGKA 521 Query: 1030 VGEMRS-AGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIA 1088 ++ +G+ ++A F Q R G+ N + +LDE+ MV D + Sbjct: 522 AAKLEEESGMLCMSVAKFF----SQLRQGKVALTKNVVVVLDEAGMVATDDTLKLMTYCQ 577 Query: 1089 AGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDV 1148 G + V GD+DQLQ IA G F L + + EI RQ Sbjct: 578 GVGAKLVMQGDSDQLQPIAAGNGFELAKIALGD--TKLTEIRRQKN-------------- 621 Query: 1149 ERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTL 1208 A + + + Q + + + Sbjct: 622 --AGDLITANSFYERDHQGKVKDMRRGHRSRQGTLDMGAQTLRNLKERNCIDDFGTEKQA 679 Query: 1209 YEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTAN 1268 +A+V DY + P ++ L++ H + + L + I ++ G L KE+ + Sbjct: 680 IKALVDDYL-KDPTPMDEKLVLAHTRSEVKALTTGIRKGLQEQGVLDKEEFTFRSIV--- 735 Query: 1269 IRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEG 1328 G+ L+ R +N I G I Sbjct: 736 --KGQWEDLTLSRRDRVMFTATNNDLGVINGTEGTVESI--------------------- 772 Query: 1329 VTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQE 1388 + D+ GY V + S+ ++ I Sbjct: 773 --------------------RKDKSGGYD-----LVVRIDS-----SNPKEDGRILKFNT 802 Query: 1389 QAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSR-MKQHVQVYT 1447 + YA+T H AQG ++ L G M +SA VA +R K ++YT Sbjct: 803 SEHNALAHRYAMTVHKAQGQGKSEVYHLATNMG----MLDQQSALVAFTRLTKGSYRMYT 858 Query: 1448 DNR--QGWTDAINNAVQKGTAHDVFEPKPDREVMNA 1481 + + + + K A V + + Sbjct: 859 TDEMMERMAERLGTERHKEMALSVGLSETQAAPVRN 894 >UniRef50_C8NSP3 Putative uncharacterized protein n=3 Tax=Corynebacterium RepID=C8NSP3_COREF Length = 1135 Score = 310 bits (793), Expect = 4e-82, Method: Composition-based stats. Identities = 170/1073 (15%), Positives = 331/1073 (30%), Gaps = 141/1073 (13%) Query: 2 MSIAQVRSAGSAGNYYTDK-------DNYYVLGS--MGERW-----AGRGAEQLGLQG-- 45 ++IA++ + +YY DNYY + W A LG++ Sbjct: 16 LTIAKL--GAHSVSYYDSTVAEGIGPDNYYSEAGSAPAQVWSRSDRVAECAAFLGVEQGQ 73 Query: 46 SVDKDVFTRLLEGR-LPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLI- 103 S+D D + P G L ++ GYDLTFSAPKSVS++ L G + Sbjct: 74 SLDGDQVKKWFNHTTAPSGNRLGQVMREDGVR--GYDLTFSAPKSVSVLWGLSGRDEVRQ 131 Query: 104 ---DAHNQAVDFAVRQVEALASTRVMTDGQSETV--LTGNLVMALFNHDTSRDQEPQLHT 158 +AH AV A+ +E AS D + T L + H TSR +P +H+ Sbjct: 132 VVDEAHAMAVARALDYLETHASYTRRRDENKTLIVDKTVGLSGVKYEHRTSRAGDPHVHS 191 Query: 159 HAVVANV-TQHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQV-EALGYETE 216 H ++AN +G+ +++ ++Y A G LY+ L+E++ LG E Sbjct: 192 HVLLANRQLCPDGQVRSVDGK---------SLYHEARAAGMLYQAVLREELTRQLGVEWG 242 Query: 217 VVGKHGMWEMPGVP----VEAFSGRSQTIREAVGEDA---SLKSRDVAALDTRKSKQHVD 269 V K G ++ G+ + AFS R+ I + E+A + + + VA TR++K Sbjct: 243 EVTK-GQADIKGLNDPAVLTAFSTRTTEIGQWEAENALTTNYQLQRVAQKKTRQTKNVDA 301 Query: 270 PEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSE 329 + + + + + P P + + + Sbjct: 302 VLSDLETQWAQQRAAQQVAQFAAGLGAGATEEKKNLPTPEA------------VLTEVIA 349 Query: 330 RKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISR--------------EQLIPLDR 375 + FT DV+ + ++P + ++ + ++ R Sbjct: 350 ERSTFTRADVVEKCAEMIPVGTLSPDEILGFVEATATHALESVALSVTPDRAREVDNTQR 409 Query: 376 EKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVP--RTAGYSDAVSVLAQDRPSL 433 E + V+ E++ N V+ V + ++A++ + Sbjct: 410 EGSQRFTTDAVIQEVNKGIDLATTKTHNAVSADSIVPVEGTLSPAQAEAMAAVVSSDFLA 469 Query: 434 AIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNM-KQDERLSGELITGRR- 491 ++V G AG+ + G+ V +A ++ M + I Sbjct: 470 SVVVAPAG-AGKTSSLKAARQAWEHAGKTVIGLAPTGKAADVMVGEHVAHESSTIARALY 528 Query: 492 --------QLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGT 543 Q+ + + + V+VD+ ++ + + LL+ ++++ + Sbjct: 529 GTEDLAPAQVAARLGWNRDTVVVVDEAGMVATPDVVRLLEITRAAQAKIVLVGDPHQYAA 588 Query: 544 GSALMAMKDAGV----------NTYRWQGGEQRPATIISEPDRNVRYARLAGDFA----- 588 A M +R + +R A+I R A + Sbjct: 589 VKARSGMLATLAYELPDAVELTEVFRQRDVAEREASIQLRSGDKDSIKRAAHWYMLQGRL 648 Query: 589 -----------------ASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTM 631 + AG++S+ + + L + +G L L E Sbjct: 649 EAGSTTAMLDDALAGWTSDTAAGKDSLLVAATGEQVQALNAGAQKIRADRGELYLSEAR- 707 Query: 632 TALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSH-SLTLRDAQGET 690 LS L ++ R+ R+ +D++ S T D T Sbjct: 708 -ELSTGQWLHAGDVLLTRKNDYDLLTSAGDVVRNGQRWRVDQLHGDGSISATRLDDTQAT 766 Query: 691 QVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVP 750 + S L S L A G + V + G V ++ V + Sbjct: 767 ATIPASYLKESGQLGYASTGHSAQGATVDVARVVAGAG----------QVDRASVYVPLT 816 Query: 751 GRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSA---TVFASVTQMAMDNATLNGLAR 807 E L +++S +G V + A+ + D Sbjct: 817 RGREGNYLYLTESMPGDTDTGHGGVTPTKRREGAEYARDLLIAAAARDGADQTPHQVWGT 876 Query: 808 SGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQA 867 + D L + + + + + Sbjct: 877 ARADWALTRLAASGEFINYSPFTGTRMGEVMAEREAQRAERFSEFFTLTQIPPKQKSALP 936 Query: 868 IHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYG 927 + + ++ S D E K + + ++ AQ + +A Sbjct: 937 SEPDVSEKCATEVNASPQD---EVKRYQHRAGEYAAALEQVRAQQAQAQAQLDAMAGEKT 993 Query: 928 TGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMI 980 R E +K + +G+ +++R E Q A + Sbjct: 994 QLESALRE-LEQKKRQVTAESQGRGFFAKMIKRSEDERRL----DQLEAALVA 1041 Score = 152 bits (384), Expect = 1e-34, Method: Composition-based stats. Identities = 77/461 (16%), Positives = 139/461 (30%), Gaps = 60/461 (13%) Query: 871 ALPVVESKKLAFSMVDLLTEAKS------------FAAEGTGFTELGGEINAQIKRGDLL 918 L V +++ F+ D++ + T + + Sbjct: 343 VLTEVIAERSTFTRADVVEKCAEMIPVGTLSPDEILGFVEATATHALESVALSVTPDRAR 402 Query: 919 YVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATR 978 VD + G+ + A + + + VP E L+ Q A Sbjct: 403 EVDNTQREGSQRFTTDAVIQEVNKGIDLATTKTHNAVSADSIVPVEG--TLSPAQAEAMA 460 Query: 979 MILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM--RSA 1036 ++ + +VV AG GKT+ + A E V+GL PT +A M Sbjct: 461 AVVSSDFLASVVVAPAGAGKTSSLK----AARQAWEHAGKTVIGLAPTGKAADVMVGEHV 516 Query: 1037 GVDAQTLASFLH---DTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGR 1093 ++ T+A L+ D Q + +T+ ++DE+ MV D+ R + A + Sbjct: 517 AHESSTIARALYGTEDLAPAQVAARLGWNRDTVVVVDEAGMVATPDVVRLLEITRAAQAK 576 Query: 1094 AVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALS 1153 V GD Q A+ D + E+ RQ Sbjct: 577 IVLVGDPHQYAAVKARSGMLATLAYELPDAVELTEVFRQRDVAEREAS------------ 624 Query: 1154 GLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIV 1213 + + + A ML+G + + + Sbjct: 625 -----------------------IQLRSGDKDSIKRAAHWYMLQGRLEAGSTTAMLDDAL 661 Query: 1214 RDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELG-KEQVMVPVLNTANIRDG 1272 +T T ++ +V E + LN+ +R GEL E + + D Sbjct: 662 AGWTSDTAAGKDSL-LVAATGEQVQALNAGAQKIRADRGELYLSEARELSTGQWLHAGDV 720 Query: 1273 ELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAE 1313 L R + ++ A +V N DG I+ + Sbjct: 721 LLTRKNDYDLLTSAGDVVRNGQRWRVDQLHGDGSISATRLD 761 Score = 72.7 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 84/611 (13%), Positives = 164/611 (26%), Gaps = 30/611 (4%) Query: 1110 QPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGA 1169 + R + V + + + + + + RAL G E + P+QV + G Sbjct: 485 KAARQAWEHAGKTVIGLAPTGKAADVMVGEHVAHESSTIARALYGTEDLAPAQVAARLGW 544 Query: 1170 WAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYE-AIVRDYTGRTPEAREQTL 1228 V + + + +A + ++ A V+ +G + Sbjct: 545 NRDTVVVVDEAGMVATPDVVRLLEITRAAQAKIVLVGDPHQYAAVKARSGMLATLAYELP 604 Query: 1229 IVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALV 1288 L E R + + + K+ + E + A Sbjct: 605 DAVELTEVFRQRDVAEREASIQLRSGDKDSIKRAAHWYMLQGRLEAGSTTAMLDDALAGW 664 Query: 1289 LVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFT 1348 D + + + G G ++ + R + + GD + Sbjct: 665 TSDTAAGKDSLLVAATGEQVQALNAGAQKIRADRGELYLSEARELSTGQWLHAGDVLLTR 724 Query: 1349 KSDRERG------YVANSVWTVTAVSGDSVT--LSDGQQTREIRPGQEQAEQHIDLAYAI 1400 K+D + W V + GD ++ L YA Sbjct: 725 KNDYDLLTSAGDVVRNGQRWRVDQLHGDGSISATRLDDTQATATIPASYLKESGQLGYAS 784 Query: 1401 TAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVY-TDNRQGWTDAINN 1459 T H AQGA+ A + G S YV L+R ++ +Y T++ G TD + Sbjct: 785 TGHSAQGATVDVARVVAGAGQ-----VDRASVYVPLTRGREGNYLYLTESMPGDTDTGHG 839 Query: 1460 AVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPARFIAPG 1519 V + E D + A R + + RA LA + Sbjct: 840 GVTPTKRREGAEYARDLLIAAAARDGADQTPHQVWGTARADWALTRLAASGEFINYSPFT 899 Query: 1520 RKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGEGRVKGSGDAQFVALQGSRN 1579 + +R + A + T + + S ++ Sbjct: 900 GT----RMGEVMAEREAQRAERFSEFFTLTQIPPKQKSALPSEPDVSEKCATEVNASPQD 955 Query: 1580 GES---LLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPGAITGGRVWGDIPDNSVQPG 1636 A + R A G + + G Sbjct: 956 EVKRYQHRAGEYAAALEQVRAQQAQAQAQLDAMAGEKTQLESALRELEQKKRQVTAESQG 1015 Query: 1637 AGNGEPVTAEVLAQRQAEEAIRRETERRADEIVRKMAENKPDLPDGKTEQAVREIAGQER 1696 G + + R ++ +V E + +P + +AV G + Sbjct: 1016 RGFFAKMIKRSEDE--------RRLDQLEAALVAGRGEVEKFMPGYRQVEAVVSDLGVQA 1067 Query: 1697 DRAAITEREAA 1707 + A+ E++A Sbjct: 1068 HKLAVQEKQAR 1078 >UniRef50_D0SGZ5 TrwC protein n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SGZ5_ACIJO Length = 1076 Score = 310 bits (792), Expect = 4e-82, Method: Composition-based stats. Identities = 136/676 (20%), Positives = 253/676 (37%), Gaps = 94/676 (13%) Query: 858 SALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDL 917 S ++A+ A+ + + + ++ A + + ++ E++ +K G L Sbjct: 451 SDRERAIREAVFYAVGHHTERDMLVTRSNIEATALNKSKAMFKIDDVNNELDRLLKNGIL 510 Query: 918 LYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEK--------- 968 + D TG L ++ +E + H+ E + +V ++ + K Sbjct: 511 VQSD------TGKLTTKRLAHSEIWSIDHVREERHSVDKILTEEQIKDDLKEREQFNKFD 564 Query: 969 LTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHR 1028 T GQR + I T R+ V G AG GKTT SA+N + + V G+ T Sbjct: 565 YTEGQRNSIYSIFTTDSRYHAVDGLAGTGKTTML----SALNKIADKNGFIVKGMAGTGV 620 Query: 1029 AVGEMRS-AGVDAQTLASFLHDTQLQQRS----GETPDFSNTLFLLDESSMVGNTDMARA 1083 A + G+ + T A F ++ Q + G D N ++++DESS G Sbjct: 621 AAKTLEEETGIPSTTTAMFKYNESKLQNNLNQSGNNFDRKNEIWIVDESSFAGQESFVDV 680 Query: 1084 YALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSL 1143 L + R V GD +QLQ+I G+PF L Q + M+ I RQ + + V SL Sbjct: 681 LKLAKSADARVVFLGDKNQLQSIEAGKPFELLQKE--MSFSSMQNINRQKTQELKDVVSL 738 Query: 1144 INRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPD 1203 I + L A+A +G Sbjct: 739 ITAKNAKGEITLSEN-----------------------------AKAFDLLDKQGSVKEY 769 Query: 1204 VPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPV 1263 + L+E +V+ Y E R +T+I+T N DR++LN ++ + GEL E+ Sbjct: 770 DQLDLHEEVVKSYMSNDLEKRNKTMIITPFNSDRKILNDLVRQAKIDKGELQGEEHAFTT 829 Query: 1264 LNTANIRDGELRRLSTWETHRDALV----------LVDNVYHRIAGISKDDG-----LIT 1308 N+ + + + + Y+ + K +G + Sbjct: 830 YANKNLTRAQQGEILEYSKGDVLRFNKTYSPEGVSFKKDEYYTVIETYKQNGGKKEEGLV 889 Query: 1309 LQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVS 1368 LQD +G + + + + +Y + + GD ++ +S+ E + +T + Sbjct: 890 LQDKDGLQQKWNSKNKN--QIEVYEKEQKELRKGDLIKINRSNGE--FKNGEKYTFKEIQ 945 Query: 1369 GDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGT--------- 1419 G+ + L D + + P E H D YA T + +QG ++T + L + Sbjct: 946 GNEIVLIDDKNQEKRMPKDE--FNHWDHGYANTIYSSQGLTKTNVLMLINSNKLSNTQNS 1003 Query: 1420 ---EGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDR 1476 N + G + YV +R ++++T ++ A+ K + + Sbjct: 1004 EQAIKNLGKIFGNRAFYVGATRASHDLKIFTHDKNVARGAVGYEQDKSSY------AQET 1057 Query: 1477 EVMNAERLFSTARELR 1492 ++ N E+ F + L Sbjct: 1058 QLGNNEKQFDQGKGLD 1073 Score = 284 bits (725), Expect = 3e-74, Method: Composition-based stats. Identities = 114/318 (35%), Positives = 157/318 (49%), Gaps = 30/318 (9%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGE-----RWAGRGAEQLGLQGS-VDKDVFTR 54 MMS+ ++S+ A YY+ KDNYY E W G+GAE LGL D D F Sbjct: 1 MMSMTTLKSSSQASTYYS-KDNYYTKEPTAESLEKAEWYGKGAEVLGLVDQDFDPDKFKE 59 Query: 55 LLEGRLPDGADLSRMQDGSN----RHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAV 110 LLEG + + + R+ +HRPG DLTFSAPKSVS+++ + D + +AH AV Sbjct: 60 LLEGTIDEDNKIGRVTYEDGVAVTQHRPGVDLTFSAPKSVSIISEVFKDDDVRNAHEDAV 119 Query: 111 DFAVRQVEA-LASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHN 169 + VE A TR+ DG + V T NLV ALF+H+ SRD +PQ HTHAVV N T Sbjct: 120 KATLDFVEKKYAQTRISVDGSMQKVDTENLVAALFSHNNSRDLDPQTHTHAVVMNAT--- 176 Query: 170 GEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGV 229 L+S E +Y NQ G +Y +L ++ LGY+ + +G +E+ G+ Sbjct: 177 -----LNSKGEWSAMSNEQIYQNQKLIGAIYNSELAVNLKDLGYDLDFKA-NGNFEISGI 230 Query: 230 P---VEAFSGRSQTIREAVGED------ASLKSRDVAALDTRKSKQHVDPEIKMAEWMQT 280 ++ FS R + + E E AS R+V ALDTR K+ V E +W + Sbjct: 231 SQDVIDEFSQRRKAMLENAEERGVDLSTASASVREVIALDTRTRKKDVTQESLDNDWSER 290 Query: 281 LKETGFDIRAYRDAADQR 298 G D R Sbjct: 291 AASFGLTKEYIETLVDPR 308 Score = 242 bits (616), Expect = 1e-61, Method: Composition-based stats. Identities = 68/651 (10%), Positives = 182/651 (27%), Gaps = 97/651 (14%) Query: 287 DIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGI 346 D ++ + + + S +++AV A+ +ER + T +++ A + Sbjct: 428 DQQSVPGNTNAALNQKVQDVEELSDRERAIREAVFYAVGHHTERDMLVTRSNIEATALNK 487 Query: 347 LPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVT 406 I+ +D + L+ + G T+ E+ R+ Sbjct: 488 SKA-MFKIDDVNNELDRLLKNGILV--QSDTGKLTTKRLAHSEIWSIDHVREERHSVDKI 544 Query: 407 VHPEK------------SVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVM 454 + E+ T G +++ + V G G G+ ++ L Sbjct: 545 LTEEQIKDDLKEREQFNKFDYTEGQRNSIYSIFTTDSRYHAVDGLAG-TGKTTMLSALNK 603 Query: 455 MAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMA----------FTPGST 504 +A + G V+ +A + ++++ + + + Sbjct: 604 IADKNGFIVKGMAGTGVAAKTLEEETGIPSTTTAMFKYNESKLQNNLNQSGNNFDRKNEI 663 Query: 505 VIVDQGEKLSLKETLTLLDGAARHNVQVLITDSG---QRTGTGSALMAMKD----AGVNT 557 IVD+ + + +L A + +V+ Q G ++ + + Sbjct: 664 WIVDESSFAGQESFVDVLKLAKSADARVVFLGDKNQLQSIEAGKPFELLQKEMSFSSMQN 723 Query: 558 YRWQGGEQRPATII-----------------------------SEPDRNVRYARLAGDFA 588 Q ++ + E D+ + + + Sbjct: 724 INRQKTQELKDVVSLITAKNAKGEITLSENAKAFDLLDKQGSVKEYDQLDLHEEVVKSYM 783 Query: 589 ASVKAGEESVAQVSG-VREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLR 647 ++ ++ ++ IL +R +G L E T + L + Sbjct: 784 SNDLEKRNKTMIITPFNSDRKILNDLVRQAKIDKGELQGEEHAFTTYANKNLTRAQQGEI 843 Query: 648 DMYRPGMVMEQWNPET------RSHDRYVIDRVTAQSH-----SLTLRDAQGETQVVRIS 696 Y G V+ + + + Y + Q+ L L+D G Q S Sbjct: 844 LEYSKGDVLRFNKTYSPEGVSFKKDEYYTVIETYKQNGGKKEEGLVLQDKDGLQQKWN-S 902 Query: 697 SLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPA 756 + ++ E+ + G+ +++ G++ + + + ++ E Sbjct: 903 KNKNQIEVYEKEQKELRKGDLIKINRSNGE--FKNGEKYTFKEIQGNEIVLIDDKNQEKR 960 Query: 757 TLPVSDSPFTALKLENGWVETPGHSVSDSATVFA-----------------SVTQMAMDN 799 + F ++ + + ++ ++ + Sbjct: 961 ---MPKDEFNHWDHGYANTIYSSQGLTKTNVLMLINSNKLSNTQNSEQAIKNLGKIFGNR 1017 Query: 800 ATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLE 850 A G R+ D+++++ + E + + Sbjct: 1018 AFYVGATRASHDLKIFTHDKNVARGAVGYEQDKSSYAQETQLGNNEKQFDQ 1068 >UniRef50_A1SIX0 DNA primase catalytic core, N-terminal domain n=3 Tax=Nocardioides sp. JS614 RepID=A1SIX0_NOCSJ Length = 1976 Score = 308 bits (789), Expect = 1e-81, Method: Composition-based stats. Identities = 132/875 (15%), Positives = 249/875 (28%), Gaps = 146/875 (16%) Query: 28 SMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRLPDGAD-----LSRMQDGSNRHRPGYDL 82 + W A++ ++ V + F GR P A +++ GYDL Sbjct: 140 GLPGDWPVPAADRAKVRTEVGTEFFRA-EHGREPADARELAAAIAKHSRPKTNAVAGYDL 198 Query: 83 TFSAPKSVSMMAMLGGDKR---LIDAHNQAVDFAVRQVEALASTRVMTDGQSETVLTGNL 139 TFS KSVS++ + K + AH A+ A+ +E+ A V L Sbjct: 199 TFSPVKSVSVLWAISDPKTAAVIERAHQAAIKDALGFIESKALFTRRGTNGVRQVDVRGL 258 Query: 140 VMALFNHDTSRDQEPQLHTHAVVANVTQH-NGEWKTLSSDKVGKTGFIENVYANQIAFGR 198 V F H SR +P LHTH VAN Q +G+W + + K ++ Sbjct: 259 VATAFTHRDSRAGDPDLHTHVAVANKVQTLDGKWLAIDGRPLHKAV---------VSASE 309 Query: 199 LYREKLKEQV-EALGYETEVV-----GKHGMWEMPGVPVE---AFSGRSQTIREAVGEDA 249 Y L+ + +ALG E K + E+ GV E FS R ++ + A Sbjct: 310 TYNTALERHLVDALGVRFEERPNEDARKRPVREIVGVDPELNRRFSKRRASVEDRRKVLA 369 Query: 250 ---------------SLKSRDVAALDTRKS-KQHVDPEIKMAEWMQTLKETGFDIRAYRD 293 +++ A L+TR++ + + W + E + Sbjct: 370 AAFQATHGRPPTPVETIQLSQQATLETREAKHEPRSLAEQRETWSREAIEVLGTPQRVEH 429 Query: 294 AADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGV 353 + + D + + +A + + + + V A + N Sbjct: 430 MVHGALNPKGAARS--LADSAWFAKTTDRIVATMEGARSTWQFWHVYAEAQRQVRGANVP 487 Query: 354 IERARAGIDEAI--------------------------SREQLIPLDREKGLFTSGIHVL 387 + +D + + + LFTSG + Sbjct: 488 TNQVPHVVDLLVSEVLDGRSVSMARAWDAISEPVELRRADGTSVYTQSGAELFTSGKVLA 547 Query: 388 DELSVRALSRDIMKQN--------RVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQ 439 E + ++ + + AG + V +A L + Sbjct: 548 AEQRLVEVAGRHDGYAVTTDSVDLALLESTANGITLNAGQATLVREMATSSARLQLAIAP 607 Query: 440 GGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEG--- 496 G +G+ + L + G + +A + ++ + + LE Sbjct: 608 AG-SGKTTAMRALASAWADGGGTIIGLAPSAAAADALRSQIDTQTDTLAKLTHSLEQARE 666 Query: 497 ---------MAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSAL 547 + V++D+ + V + Q+ A Sbjct: 667 SGAAMPAWVARIDSSTLVVIDEAGMADTLSLDAAVSYILERGGSVRLIGDDQQLSAIGAG 726 Query: 548 MAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQ 607 ++D R G + ++ D A LA ++ G+ R++ Sbjct: 727 GVLRD-----IRATHGALQLTELVRFKDPAEGAASLA------LREGKPESLGFYLDRDR 775 Query: 608 AILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHD 667 + + E A + R ++ + N + R+H Sbjct: 776 VHVGDLA----------TMTEDVFAAWQADRAAGLDSIMLAPTR--DLVSELNQQARAHR 823 Query: 668 RYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGL 727 I+ + R A G + GE + L Sbjct: 824 LEGIEPADVAASGPVRRLADGN---------------------EASIGELIITRENDRRL 862 Query: 728 R------VSGGDRLQVASVSEDA-MTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGH 780 R V GDR V + +D +TV LP ++ +L Sbjct: 863 RTSATDWVKNGDRWNVLEIHDDGDLTVQHTQHGRTVRLPADYVARSS-ELGYACTVHTAQ 921 Query: 781 SVSDSATVFASVTQMAMDNATLNGLARSGRDVRLY 815 V+ + + + R +Y Sbjct: 922 GVTADTMHGLATGSES-RQQLYTMMTRGVHANHVY 955 Score = 152 bits (382), Expect = 2e-34, Method: Composition-based stats. Identities = 148/988 (14%), Positives = 266/988 (26%), Gaps = 145/988 (14%) Query: 789 FASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETS 848 A + A + ++ +L+ A LA F +++I Sbjct: 406 LAEQRETWSREAIEVLGTPQRVEHMVHGALNPKGAARSLADSAWFAKTTDRIVATMEGAR 465 Query: 849 LETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEI 908 H ++ AQ+ + A + L++E I Sbjct: 466 STWQFWH----VYAEAQRQVRGANVPTNQVPHVVDL--LVSEVLD--GRSVSMARAWDAI 517 Query: 909 NAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHI--LEGKEAVMPLMERVPGE-- 964 + ++ V G L S AE+ ++ +G ++ E Sbjct: 518 SEPVELRRADGTSVYTQSGAELFTSGKVLAAEQRLVEVAGRHDGYAVTTDSVDLALLEST 577 Query: 965 -LMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGL 1023 L +GQ R + +S R + AG GKTT RA+ SA ++GL Sbjct: 578 ANGITLNAGQATLVREMATSSARLQLAIAPAGSGKTTAMRALASA----WADGGGTIIGL 633 Query: 1024 GPTHRAVGEMRSA-GVDAQTLASFLHDTQLQQRSGET------PDFSNTLFLLDESSMVG 1076 P+ A +RS TLA H + + SG S+TL ++DE+ M Sbjct: 634 APSAAAADALRSQIDTQTDTLAKLTHSLEQARESGAAMPAWVARIDSSTLVVIDEAGMAD 693 Query: 1077 NTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPEL 1136 + A + I GG GD QL AI G R R+ + E+VR Sbjct: 694 TLSLDAAVSYILERGGSVRLIGDDQQLSAIGAGGVLRDI--RATHGALQLTELVRFKDPA 751 Query: 1137 REAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAML 1196 A + +L + + Sbjct: 752 EGAASLALREGKPESLGFY-----------------------------------LDRDRV 776 Query: 1197 KGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGK 1256 + ++ A D ++++ + LN R + E Sbjct: 777 HVGDLATMTEDVFAAWQADRAA-----GLDSIMLAPTRDLVSELNQQARAHRLEGIEPAD 831 Query: 1257 EQVMVPVLNTANIRDGEL------RRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQ 1310 PV A+ + + R + + + I DDG +T+Q Sbjct: 832 VAASGPVRRLADGNEASIGELIITRENDRRLRTSATDWVKNGDRWNVLEI-HDDGDLTVQ 890 Query: 1311 DAEGNTRLISPREAVAEGVTLYTPDTIRVGT-----GDRMRFTKSDRERGYVANSVWTVT 1365 + + P + VA L T+ T S+ + V Sbjct: 891 HTQHGRTVRLPADYVARSSELGYACTVHTAQGVTADTMHGLATGSESRQQLYTMMTRGVH 950 Query: 1366 AVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKL 1425 A + DG I P + D + + R Sbjct: 951 ANHVYLEVVGDGDPHSVIHPTLVRPLTPTD--------------------ILESMLARDN 990 Query: 1426 MAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLF 1485 M + T+ + P + A + + Sbjct: 991 M----------------------------------QRSATSLLREQADPATRLGEAAQRY 1016 Query: 1486 STARELRDVAAGRAVLRQAGLAGGDSP-ARFIAPGRKYPQPYVALPAFDRNGKSAGIWLN 1544 + + R G + + + P ++ A ++ + L Sbjct: 1017 LDSLYVAAEDFLRHDDVGQDANGAPTNVVDALDNAVETLVPGLSEEAAWPTLRAHLLLLG 1076 Query: 1545 PLTTDDGNGLRGFSGEGRVKGSGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVV 1604 + + LR +G+ ++ + D V A P V Sbjct: 1077 AAGQNPVDALRAAAGDRELETAHDRAAVLDWRLDASGLRNAGAGPL--------PWMPAV 1128 Query: 1605 VRIAGEGRPWNPGAITGGRVWGDIPDNSVQPGAGNGEPVTAEVLAQRQAEEAIRRETERR 1664 + W ++ + + V+ A + + A + E A E Sbjct: 1129 PARLAKDPHW-GAYLSQRAHLVEQLADQVRTRATDQAALPAWAQNGLRPEAATVANVEVW 1187 Query: 1665 ADEIVRKMAENKPDLPDGKTEQAVREIAGQERDRAAITEREAALPEGVLREPQRVREAVR 1724 + + + +P Q + +RA + AL E VR Sbjct: 1188 RAAMQVLVDDRRPT--GAPQLQKASATWQRRLNRAVTGDHTPALKEWRQLLYSLAP-QVR 1244 Query: 1725 EIARENLLQERLQQMERDMVRDLQKEKT 1752 + LL ERL M R V + +T Sbjct: 1245 DDEFTPLLAERLAAMSRAGVTAHELLRT 1272 >UniRef50_A1RCJ2 Putative TraA-like conjugal transfer protein n=1 Tax=Arthrobacter aurescens TC1 RepID=A1RCJ2_ARTAT Length = 1158 Score = 308 bits (789), Expect = 1e-81, Method: Composition-based stats. Identities = 152/902 (16%), Positives = 264/902 (29%), Gaps = 175/902 (19%) Query: 20 KDNYYVLGSMGERWAGRGAEQLGLQG-SVDKDVFTRLL-EGRLPDGADLSRMQ------- 70 + Y G+ W GRGAEQLGL G V +D L GR PDG Sbjct: 33 AEYYVARGNPPGVWTGRGAEQLGLAGTEVSEDQMRALFGAGRHPDGVHRLGAAYPSYATL 92 Query: 71 -----------------------------------DGSNRHRPGYDLTFSAPKSVSMMAM 95 R G+DL F+ KS S++ Sbjct: 93 APYQQRVAERLAEWESLNGRPPSAAERNRIAAVEARRGRRAVAGFDLVFTPVKSASVLWA 152 Query: 96 LGGDK---RLIDAHNQAVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQ 152 LGG + + DAH++AV ++ +E+ A+ + G + L+ A+F+H SR Sbjct: 153 LGGAEVRGAVEDAHHEAVLSSLGWLESHAAYTRVGRGGVAQIDATGLICAMFDHRESRAG 212 Query: 153 EPQLHTHAVVANVTQH-NGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQV-EA 210 +P LHTH VAN +G+W++L +YA +A Y + ++ + Sbjct: 213 DPDLHTHVAVANKVCGVDGKWRSLD---------ARGLYALGVAASERYNTRFEDALARR 263 Query: 211 LGYET-----EVVGKHGMWEMPGVPVE---AFSGRSQTIREAVGED-------------- 248 LG E + E+ GVP E FS R I + E Sbjct: 264 LGVEFVERPSNRRDLRPVREIDGVPAELLRHFSQRRAAIEDRYAELRRNYRATHGREPDR 323 Query: 249 -ASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPG 307 ++ A L+TR++K + T R A +D Sbjct: 324 ATQIQLAQQATLETREAKGAARSLAEQVTDWTTQARQLIGARRLDRLA---SDCMGRERS 380 Query: 308 PASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISR 367 + D PDV + +Q + ++E++ +T +V A T L R + A+ Sbjct: 381 AGAADVPDVDELASQIVGTIAEQRSTWTVWNVHAETERTLRRYWFATADERELVTRAVVD 440 Query: 368 --------------------EQLIPL--------DREKGLFTSGIHVLDELSVRALSRDI 399 +LI +T+ ++ E + A +R Sbjct: 441 RATGSHHSIRITEPEFVREAPELIRASDGVSMFRAHGSDRYTTSEVMIAEDELIAAARST 500 Query: 400 ---------MKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVA 450 ++ + G V A + + G G AG+ + Sbjct: 501 DGPRVDPHSLQAGLAIHEARTGLVLDRGQRGLVEAFACSSARIVVGIGPAG-AGKTTAMR 559 Query: 451 ELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEG-------------M 497 + G V +A R+ + + + E + Sbjct: 560 AFAATWQADGGRVIPLATSSRAAHVLGAELEMRAENLHKFLFEHHRANDRESSDLADRWF 619 Query: 498 AFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTG---TGSALMAMKDAG 554 G V+VD+ LL A V + + G AL +++ Sbjct: 620 QLGAGDVVLVDEAGMAGTLHLHQLLRIATEAGATVRLLGDPAQLAAVDAGGALNLLEEET 679 Query: 555 ----VNTYRWQGGEQRPATIISEP----------DRNVRYARLAGD---------FAASV 591 + T ++ D R A + D +A V Sbjct: 680 GATYLTTLHRFTDPAEGDATLALRRGNPKAVTFYDDRDRIAAGSRDAMLEAAYDHWACDV 739 Query: 592 KAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYR 651 +AG+ SV + + L R E G + V L L ++ Sbjct: 740 RAGKRSVLIAATTGDVNALNARARLERALAGQIEADGV---VLHDGNLAGVGDWVVTRTN 796 Query: 652 PGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMP 711 + + + D + + G + + + + L Sbjct: 797 ARTLRYGRSRWVHNGDAWRVTGRHRDGSLTVRHLEHGSSVRLPRDYVADAVELGYACTAH 856 Query: 712 VADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLE 771 A G + L ++ + + V + V+ L + Sbjct: 857 RAQGATVDT-----------AHALVTTEMTREGLYVASTRGRDSNRWYVASDEPVTLDCD 905 Query: 772 NG 773 + Sbjct: 906 HE 907 Score = 158 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 123/925 (13%), Positives = 235/925 (25%), Gaps = 103/925 (11%) Query: 766 TALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRT-A 824 +L + T G + + + V +++ A Sbjct: 305 RYAELRRNYRATHGREPDRATQIQLAQQATLETREAKGAARSLAEQVTDWTTQARQLIGA 364 Query: 825 EKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKK----- 879 +L R S + E+ A ++ S + + + Sbjct: 365 RRLDRLASDCMGRERSAGAADVPDVDELASQIVGTIAEQRSTWTVWNVHAETERTLRRYW 424 Query: 880 -LAFSMVDLLTEAK------SFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLV 932 +L+T A S + E E I+ D + + A +G+ Sbjct: 425 FATADERELVTRAVVDRATGSHHSIRITEPEFVREAPELIRASDGVSMFRA--HGSDRYT 482 Query: 933 SRASYEAEKSILRHILE------GKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDR 986 + AE ++ ++ + L GQR +S R Sbjct: 483 TSEVMIAEDELIAAARSTDGPRVDPHSLQAGLAIHEARTGLVLDRGQRGLVEAFACSSAR 542 Query: 987 FTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM-RSAGVDAQTLAS 1045 V G AG GKTT RA + +++ RV+ L + RA + + A+ L Sbjct: 543 IVVGIGPAGAGKTTAMRAFAAT----WQADGGRVIPLATSSRAAHVLGAELEMRAENLHK 598 Query: 1046 FLHDTQLQQRSGET-------PDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASG 1098 FL + + + + L+DE+ M G + + + G G Sbjct: 599 FLFEHHRANDRESSDLADRWFQLGAGDVVLVDEAGMAGTLHLHQLLRIATEAGATVRLLG 658 Query: 1099 DTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESV 1158 D QL A+ G L + + A + + R T + R +A++ + Sbjct: 659 DPAQLAAVDAGGALNLLEEETGA--TYLTTLHRFTDPAEGDATLALRRGNPKAVTFYDDR 716 Query: 1159 KPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTG 1218 ++ D+ Sbjct: 717 DRIAAGSRDAML----------------------------------------EAAYDHWA 736 Query: 1219 RTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLS 1278 A ++++++ D LN+ R AG++ + V++ N A + D + R + Sbjct: 737 CDVRAGKRSVLIAATTGDVNALNARARLERALAGQIEADGVVLHDGNLAGVGDWVVTRTN 796 Query: 1279 TWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIR 1338 V N DG +T++ E + + PR+ VA+ V L T Sbjct: 797 ARTLRYGRSRWVHNGDAWRVTGRHRDGSLTVRHLEHGSSVRLPRDYVADAVELGYACTAH 856 Query: 1339 VGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAY 1398 G + + ++ + DS + E Sbjct: 857 RAQGATVDTAHALVTTEMTREGLYVASTRGRDSNRWYVASDEPVTLDCDHEPEPPRT--- 913 Query: 1399 AITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAIN 1458 + A+ G Q ++ T + Sbjct: 914 ----------TYEVLDAVLRRTGAELS-------------ATQTLRETTGEATRLRSLVG 950 Query: 1459 NAVQK--GTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPARFI 1516 A D + R +A A G+ G R + Sbjct: 951 RYEHARDRAAMDALRLAVAELPEPEQTRILGDRGAPHLARVLADAVARGIDGPVLVRRAL 1010 Query: 1517 APGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGEGRVKGSGDAQFVALQG 1576 AL R P DG+ G + Sbjct: 1011 DLDSTDNTRSPALVLASRITDHPRTLGIPDRPADGSPNARPLPWLHAPSVGHPGWDPYLK 1070 Query: 1577 SRNGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPGAITGGRVWGDIPDNSVQPG 1636 R + A G P PG + + ++ P Sbjct: 1071 MRAALIADRAAELGSLVDAYREQYDITTTNAGPLGEPPQPGTRREAAYRAALAELALTPP 1130 Query: 1637 AGNGEPVTAEVLAQRQAEEAIRRET 1661 P + + + + + + Sbjct: 1131 RPAPAPQSTPAPSPTRRPDHQQSHS 1155 Score = 94.3 bits (232), Expect = 4e-17, Method: Composition-based stats. Identities = 93/621 (14%), Positives = 163/621 (26%), Gaps = 43/621 (6%) Query: 1111 PFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAW 1170 F V + R L A + ++ + L + W Sbjct: 560 AFAATWQADGGRVIPLATSSRAAHVL-GAELEMRAENLHKFLFEHHRANDRESSDLADRW 618 Query: 1171 APEHS-----VTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEARE 1225 + V E + L + + A G + A V E Sbjct: 619 FQLGAGDVVLVDEAGMAGTLHLHQLLRIATEAGATVRLLGDPAQLAAVDAGGALNLLEEE 678 Query: 1226 Q-----TLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTW 1280 T + + + KA ++ + + + + + Sbjct: 679 TGATYLTTLHRFTDPAEGDATLALRRGNPKAVTFYDDRDRIAAGSRDAMLEAAYDHWACD 738 Query: 1281 ETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVG 1340 VL+ + ++ L + + + GV + V Sbjct: 739 VRAGKRSVLIAATTGDVNALNARARLERALAGQIEADGVVLHDGNLAGVGDW------VV 792 Query: 1341 TGDRMRFTKSDRERGYVANSVWTVTAV-SGDSVTLSDGQQTREIRPGQEQAEQHIDLAYA 1399 T R + R R W VT S+T+ + +R ++ ++L YA Sbjct: 793 TRTNARTLRYGRSRWVHNGDAWRVTGRHRDGSLTVRHLEHGSSVRLPRDYVADAVELGYA 852 Query: 1400 ITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYT-DNRQGWTDAIN 1458 TAH AQGA+ A AL TE E YVA +R + + Y + D + Sbjct: 853 CTAHRAQGATVDTAHALVTTEM------TREGLYVASTRGRDSNRWYVASDEPVTLDCDH 906 Query: 1459 NAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPARFIAP 1518 T ++V + R S + LR+ LR + R Sbjct: 907 EPEPPRTTYEVLDAVLRRT----GAELSATQTLRETTGEATRLRSLVGRYEHARDRAAMD 962 Query: 1519 GRKYPQPYVALPAFDRN-GKSAGIWLNPLTTDDGNGLRGFSGEGRVKGSGDAQFVALQGS 1577 + + P R G L + D +G V + + Sbjct: 963 ALRLAVAELPEPEQTRILGDRGAPHLARVLADAVARGI----DGPVLVRRALDLDSTDNT 1018 Query: 1578 RNGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPGAITGGRVWGDIPDNSVQPGA 1637 R+ +LA + D R PD PW G W A Sbjct: 1019 RSPALVLASRITDHPRTLGI-PDRPADGSPNARPLPWLHAPSVGHPGWDPYLKMRAALIA 1077 Query: 1638 GNGEPVTAEVLAQRQAEEAIRRETERR--------ADEIVRKMAENKPDLPDGKTEQAVR 1689 + + V A R+ + E + A + L + A + Sbjct: 1078 DRAAELGSLVDAYREQYDITTTNAGPLGEPPQPGTRREAAYRAALAELALTPPRPAPAPQ 1137 Query: 1690 EIAGQERDRAAITEREAALPE 1710 R ++ +L Sbjct: 1138 STPAPSPTRRPDHQQSHSLTR 1158 >UniRef50_C3JH47 DNA primase catalytic core domain protein n=1 Tax=Rhodococcus erythropolis SK121 RepID=C3JH47_RHOER Length = 1568 Score = 306 bits (782), Expect = 6e-81, Method: Composition-based stats. Identities = 164/933 (17%), Positives = 284/933 (30%), Gaps = 115/933 (12%) Query: 66 LSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDK---RLIDAHNQAVDFAVRQVEALAS 122 ++ + + GYDL F+ KSVS++ LG D+ + AH AV+ + +E+ A+ Sbjct: 168 MAAQESKIRQPVAGYDLVFTPVKSVSVLWGLGDDEVRTAIEQAHKDAVNETLAWIESEAA 227 Query: 123 TRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH-NGEWKTLSSDKVG 181 E + T LV+A F+H +R+ +P LHTH V+N + +G W +L + + Sbjct: 228 LTRRGTAGVEQIDTHGLVIAQFDHFDNRNGDPNLHTHCAVSNKVRGIDGNWSSLDARVLH 287 Query: 182 KTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVEA---FSGRS 238 + N+I ++ R L E + K + E+ GVP E FS R Sbjct: 288 RIAVAGAARYNRIVADKISRA-LPVAFED---RSRGENKQPVREIAGVPQELLDGFSRRP 343 Query: 239 QTIREAVGEDASLKSR--------------DVAALDTRKSKQHVDPEIKMAEWMQTLKET 284 Q + A A ++ A L+TR KQ +A + +E Sbjct: 344 QIMERANELMAEYRAEHGKNPSKVVQISLVQRATLETRSGKQTP---KSLAAMREEWREQ 400 Query: 285 GFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTV 344 ++ + A + D Q + A+ +S ++ +T +V Sbjct: 401 AVNMLGADGIDNLLATALSQDEPFIDVTEFDADQVASAAVERVSLQRSTWTEANVRTVAE 460 Query: 345 GILPPENGVIERARAGIDEAI-------------------------SREQLIPLDREKGL 379 +L E E + + + D +K Sbjct: 461 DMLSRVKFPSEEQANAAVELVVNRALHRDSLLVDISLDQMPEAMTRANGESTLTDHQKAR 520 Query: 380 FTSGIHVLDELSVRALSRD---------IMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDR 430 +TS + E + + + + P G LA Sbjct: 521 YTSTAMLDAEQRLLGAAHTPTVFTVSDSAFETALAYRENLEGRPFNKGQIALARHLATSE 580 Query: 431 PSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGR 490 LA+ G G G+ + + + QGR+V + + + +D + G I Sbjct: 581 ALLAVGIGPAG-TGKTTSMKAVTDAWQAQGRDVIALGPSAAAATVLGEDIGVRGRTIDDI 639 Query: 491 RQLLE---GMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSAL 547 A G+ ++VD+ S + L+ AA H V + + +A Sbjct: 640 LTRHRLGIDAAINRGAMLLVDESGMASTHQLDALVQIAAEHGAVVRLIGDPAQLSAVNAG 699 Query: 548 MAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQ 607 A+ ++ D + R D + +++ GE S + E+ Sbjct: 700 GAL-----GLLARDTRAPELEEVVRFSDDDER------DISLALRKGEHS--VIEWYEER 746 Query: 608 AILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHD 667 A L R EL LD R G P T Sbjct: 747 ARLIGGSRDEL--------------------LDKILRDHLADTAAGSTSVMLAPTTADAA 786 Query: 668 RYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGL 727 + TL D + + R + + V G G Sbjct: 787 SLNQGAQAIHLVNGTLTDGARTALTAGDHAYVGDIIVTRRNQNNITA-----VGGTRAGQ 841 Query: 728 RVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSAT 787 RV GD V +V+E + V TLP + + E G+ T + + Sbjct: 842 RVENGDLWTVQAVTEHGIIAVHKRHGGTVTLP---NWYLTQHTELGYAHTIHRAQGMTVD 898 Query: 788 VFASVTQMAMDNAT-LNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGE 846 V S+ ++ L R Y DE + + + S + Sbjct: 899 VARSLLGASVTREAGYVALTRGRHGNYAYLVTDELPDGDLDHQPDPVSTRSGVLAEILDR 958 Query: 847 TSLETAISHQKSALHTPAQQAIHL-------ALPVVESKKLAFSMVDLLTEAKSFAAEGT 899 E + + Q A A + L L + A + Sbjct: 959 RGEEISATEQLREALDRASDPARFQTYYDVAAAKLGTDYALHLLDRSLPATILATAKKQD 1018 Query: 900 GFTELGGEINAQIKRGDLLYVDVAKGYGTGLLV 932 GF L + G + +A L Sbjct: 1019 GFDSLVARVRELATHGADIAPILAAATDRELAT 1051 Score = 148 bits (374), Expect = 2e-33, Method: Composition-based stats. Identities = 118/992 (11%), Positives = 241/992 (24%), Gaps = 59/992 (5%) Query: 766 TALKLENGWVETPGHSVSDSATV-FASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTA 824 A +L + G + S + + + + + A Sbjct: 348 RANELMAEYRAEHGKNPSKVVQISLVQRATLETRSGKQTPKSLAAMREEWREQAVNMLGA 407 Query: 825 EKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIH---LALPVVESKKLA 881 + + + + ++ E + S + + ++ Sbjct: 408 DGIDNLLATALSQDEPFIDVTEFDADQVASAAVERVSLQRSTWTEANVRTVAEDMLSRVK 467 Query: 882 FSMVDLLTEAKSFAAEGTGFTE---LGGEINAQIKRGDLLY-VDVAKGYGTGLLVSRASY 937 F + A + + ++ + + S A Sbjct: 468 FPSEEQANAAVELVVNRALHRDSLLVDISLDQMPEAMTRANGESTLTDHQKARYTSTAML 527 Query: 938 EAEKSILRHILE------GKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQ 991 +AE+ +L A + GQ A R + + V Sbjct: 528 DAEQRLLGAAHTPTVFTVSDSAFETALAYRENLEGRPFNKGQIALARHLATSEALLAVGI 587 Query: 992 GYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA-GVDAQTLASFLHDT 1050 G AG GKTT +AV A +++ V+ LGP+ A + GV +T+ L Sbjct: 588 GPAGTGKTTSMKAVTDA----WQAQGRDVIALGPSAAAATVLGEDIGVRGRTIDDILTRH 643 Query: 1051 QLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQ 1110 +L + + L+DES M + + A G GD QL A+ G Sbjct: 644 RLGI---DAAINRGAMLLVDESGMASTHQLDALVQIAAEHGAVVRLIGDPAQLSAVNAGG 700 Query: 1111 PFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGL-ESVKPSQVPRQEGA 1169 L + A ++E+VR + + + + + + E + R E Sbjct: 701 ALGLLARDTRAP--ELEEVVRFSDDDERDISLALRKGEHSVIEWYEERARLIGGSRDELL 758 Query: 1170 WAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLI 1229 + + + A A + L + D A + + Sbjct: 759 DKILRDHLADTAAGSTSVMLAPTTADAASLNQGAQAIHLVNGTLTDGARTALTAGDHAYV 818 Query: 1230 VTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVL 1289 + R N + + T + +R T + + Sbjct: 819 GDIIVTRRNQNNITAVGGTRAGQRVENGDLWTVQAVTEHGIIAVHKRHGGTVTLPNWYLT 878 Query: 1290 VDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTK 1349 I + G+ ++ + + T + Sbjct: 879 QHTELGYAHTIHRAQGMTVDVARSLLGASVTREAGYVALTRGRHGNYAYLVTDELPDGDL 938 Query: 1350 SDRERGY--VANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQ-HIDLAYAITAHGAQ 1406 + + + + G+ ++ ++ + R Q + D+A A Sbjct: 939 DHQPDPVSTRSGVLAEILDRRGEEISATEQLREALDRASDPARFQTYYDVAAAK------ 992 Query: 1407 GASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTA 1466 +A+ L ++A K+ D + + A Sbjct: 993 -LGTDYALHLLDRSLPATILAT----------AKKQ-----DGFDSLVARV-----RELA 1031 Query: 1467 HDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPARFIAPGRKYPQPY 1526 + P L + + GR + D A R Q Sbjct: 1032 THGADIAPILAAATDRELATVGN-IPGALLGRLKAIETPALADDQQAILPPVHRGSDQTL 1090 Query: 1527 VALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGEGRVKGSGDAQFVALQGSRN--GESLL 1584 R + + D + + A +G E+ L Sbjct: 1091 REFATRMREQIGSSPTVTAADFDGLRPVDLEYTHPQQSAYDAALARIAEGDAATLLEAAL 1150 Query: 1585 ADNMQDGVRIARD-NPDSGVVVRIAGEGRPWNPGAITGGRVWGDIPDNSVQPGAGNGEPV 1643 +++ D +R P V G + G Sbjct: 1151 PEHVVDAIRDDGQWTPLLAAVADAEIHGGRDPYSVVATITEQGPERLAGYGTALLERLRT 1210 Query: 1644 TAEVLAQRQAEEAIRRETERRADEIVRKMAENKPDLPDGKTEQAVREIAGQERDRAAITE 1703 E A R + E + L + + E A + T Sbjct: 1211 LDETTPADSALPDTREPIAPTGRALAAYATELRDYLDTLDSPTSRPETAQPQETARTTTP 1270 Query: 1704 REAALPEGVLREPQRVREAVREIARENLLQER 1735 P + R + E ++ R Sbjct: 1271 ARTIEPSPITRREKTRPEIPQQQTEPRPAITR 1302 Score = 43.8 bits (101), Expect = 0.057, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%) Query: 20 KDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLL-EGRLPD 62 D Y G+ W GRG + LGL G V ++ L EG P+ Sbjct: 34 ADYYVAEGTPPGLWIGRGIDDLGLTGQVSEEQMRALFGEGLHPN 77 >UniRef50_A1SH09 DNA primase catalytic core, N-terminal domain n=1 Tax=Nocardioides sp. JS614 RepID=A1SH09_NOCSJ Length = 1797 Score = 305 bits (781), Expect = 8e-81, Method: Composition-based stats. Identities = 157/1047 (14%), Positives = 283/1047 (27%), Gaps = 139/1047 (13%) Query: 39 EQLGLQGSVDKDVFTRLLEGRLPD-----GADLSRMQDGSNRHRPGYDLTFSAPKSVSMM 93 E+ ++ + +F GR P +++ G+DLTFS KSVS + Sbjct: 166 ERARIRTQIGTAMFVEG-HGREPQDARELSGFIAKASRQPTSAVAGFDLTFSPVKSVSAL 224 Query: 94 AMLGGDK---RLIDAHNQAVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSR 150 L + + AH+ AV + +E + + G V LV A F H SR Sbjct: 225 WALAPKEVAADIRAAHDAAVVDTLTWLEREVAHTRVGSGGVRQVKVRGLVAAAFTHRDSR 284 Query: 151 DQEPQLHTHAVVANVTQH-NGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQV- 208 +P LHTH V+N Q +G W L +YA ++ Y +++ ++ Sbjct: 285 AGDPDLHTHVAVSNKVQAEDGHWLALDG---------RLLYAAKVTASEHYNTRVEAELV 335 Query: 209 EALGYETEVVG-----KHGMWEMPGVPVEA---FSGRSQTIREAVGEDA----------- 249 LG E K + E+ GV +S R I E A Sbjct: 336 ARLGVEFADRDDTVGGKVPVREIRGVSTTLTRWWSRRRVAIEARQAEIAAEFQGRFGRPP 395 Query: 250 ----SLKSRDVAALDTRKSKQHVDPE-IKMAEWMQTLKETGFDIRAYRDAADQRADLRTL 304 + D A L+TR +K E + EW + D + + R Sbjct: 396 TAIEAKSLADQATLETRDAKHGRRSEREQRDEWRAEADDVLGDPAEVDEMYSRAVGRRNG 455 Query: 305 TPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEA 364 DV A IA + E + + +LA + +D+ Sbjct: 456 GRTATRDWVEDVAAA---TIAFVEESRATWNVWHLLAEAQRQARRAGIARDDVDRAVDQV 512 Query: 365 IS------------------------REQLIPLDREKGLFTSGIHVLDELSVRALSRDIM 400 + + L+TS +L E + L+ Sbjct: 513 VDAAISRSVRLGVDDPISEPPPLQRPDGASVYDVHGATLYTSAKVLLAEEEILNLAGRTG 572 Query: 401 KQNRVTVHPE--------KSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAEL 452 V E + LA + + G G+ ++ L Sbjct: 573 GHALADVRVEVAIAGAAANGFELNDAQAAMARDLATSGAVVQLALAPAG-TGKTTTMSVL 631 Query: 453 VMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEG----------MAFTPG 502 G +V +A ++ + Q + + L P Sbjct: 632 ADAWAAGGGQVIGLAPSAQAAHELGQAVSGYTDTLAKLTWTLANEPSVAWPRWIRDIGPQ 691 Query: 503 STVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMKD-------AGV 555 S VIVD+ + + E + A V + Q+ A ++D + + Sbjct: 692 SLVIVDEAGQAATTELAAAVRFVAERGGAVRLIGDDQQLAAVGAGGVLRDIQQQYGASTL 751 Query: 556 NTYRWQGGE-------------------QRPATIISEPDRNVRYARLAGDFAASVKAGEE 596 + R I D + + +A+ AG + Sbjct: 752 SEVRRFDDPAEAAATLAVREGDAAALGFYADNARIHVGDLSAVADQAYDSWASDRAAGLD 811 Query: 597 SVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVM 656 SV L R++ T PEV + + + R+ R ++ Sbjct: 812 SVLLAPTRELVCQLNARARADRLTATATVGPEVDLADGNRGSVGDVIVTRRNSRR---LV 868 Query: 657 EQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGE 716 + ++ DR+ I++V L G T + + + L + A G Sbjct: 869 VSRSNWVKNGDRWRIEKVLGDGGLLARHLELGRTVELPLDYVAQHVHLGYATTVHGAQGM 928 Query: 717 RLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVE 776 T + L V + P Sbjct: 929 TAD-TAHLVAAGEETRQTLYVGISRGRQANHIYLDTGYDGDPHSLIDPKALR-------- 979 Query: 777 TPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVV 836 + + A + + + + R Y++ Sbjct: 980 -----PPTAIDILAEILERDGSDRSATTTQREASA---YTTQFHDAVMRYHDALGYAAED 1031 Query: 837 SEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAA 896 + A AI ++ HLAL V+ +++D + Sbjct: 1032 VLGADSLASTNREVEAIWPGLTSEPAYPTLRGHLALRTVDGADPVATLLD--AANERELG 1089 Query: 897 EGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAE-KSILRHILEGKEAVM 955 + + G L ++D + + I + Sbjct: 1090 TSDDRAAVLDWRLGKAAAGPLPWLDGVPERLADHATWGPYLRSRFERITTLAGAVRGEAE 1149 Query: 956 PLMERVPGELMEKLTSGQRAATRMILE 982 LT+ + +A R L Sbjct: 1150 AWTPTATPPWASGLTAAEHSALRGDLS 1176 Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats. Identities = 142/968 (14%), Positives = 245/968 (25%), Gaps = 175/968 (18%) Query: 807 RSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLET---AISHQKSALHTP 863 R RD + D ++ S V A +E A Sbjct: 422 REQRDEWRAEADDVLGDPAEVDEMYSRAVGRRNGGRTATRDWVEDVAAATIAFVEESRAT 481 Query: 864 AQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVA 923 LA ++++ + D + A + + ++ I L Sbjct: 482 WNVWHLLAEAQRQARRAGIARDD-VDRAVDQVVDAAISRSVRLGVDDPISEPPPLQRPDG 540 Query: 924 ----KGYGTGLLVSRASYEAEKSILRHI-----LEGKEAVMPLMERVPGELMEKLTSGQR 974 +G L S AE+ IL + + + +L Q Sbjct: 541 ASVYDVHGATLYTSAKVLLAEEEILNLAGRTGGHALADVRVEVAIAGAAANGFELNDAQA 600 Query: 975 AATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMR 1034 A R + + + AG GKTT + A + +V+GL P+ +A E+ Sbjct: 601 AMARDLATSGAVVQLALAPAGTGKTTTMSVLADA----WAAGGGQVIGLAPSAQAAHELG 656 Query: 1035 SA-GVDAQTLASF---LHDTQL-QQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAA 1089 A TLA L + +L ++DE+ T++A A +A Sbjct: 657 QAVSGYTDTLAKLTWTLANEPSVAWPRWIRDIGPQSLVIVDEAGQAATTELAAAVRFVAE 716 Query: 1090 GGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVE 1149 GG GD QL A+ G R Q + A + E+ R A + Sbjct: 717 RGGAVRLIGDDQQLAAVGAGGVLRDIQQQYGAST--LSEVRRFDDPAEAAATLAVREGDA 774 Query: 1150 RALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLY 1209 AL A + V Y Sbjct: 775 AALGFY-----------------------------------ADNARIHVGDLSAVADQAY 799 Query: 1210 EAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANI 1269 ++ D ++++ E LN+ R A +V + N ++ Sbjct: 800 DSWASDRAA-----GLDSVLLAPTRELVCQLNARARADRLTATATVGPEVDLADGNRGSV 854 Query: 1270 RDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGV 1329 D + R ++ V N DG + + E + P + VA+ V Sbjct: 855 GDVIVTRRNSRRLVVSRSNWVKNGDRWRIEKVLGDGGLLARHLELGRTVELPLDYVAQHV 914 Query: 1330 TLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQ 1389 L T+ +G A++ V A TL G Sbjct: 915 HLGYATTVHGA-------------QGMTADTAHLVAAGEETRQTLYVGI----------- 950 Query: 1390 AEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAY--VALSRMKQHVQVYT 1447 ++G G +G+ + ++ A+ Sbjct: 951 ---------------SRGRQANHIYLDTGYDGDPHSLIDPKALRPPTAI----------- 984 Query: 1448 DNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLA 1507 + + +A RE F A A G A G Sbjct: 985 ---DILAEILERDGSDRSAT-----TTQREASAYTTQFHDAVMRYHDALGYAAEDVLGAD 1036 Query: 1508 GGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGEGRVKGSG 1567 S R + A P G Sbjct: 1037 SLASTNREVEAIWPGLTSEPAYPTL---------------------------------RG 1063 Query: 1568 DAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIAG------EGRPWNPGAITG 1621 + G+ +LL + + + D+ + + R+ P + Sbjct: 1064 HLALRTVDGADPVATLLDAANERELGTS-DDRAAVLDWRLGKAAAGPLPWLDGVPERLAD 1122 Query: 1622 GRVWGDIPDNSVQ-------PGAGNGEPVTAEVLAQRQAEEAIRRETERRADEIVRKMAE 1674 WG + + G E T + + R D V + A Sbjct: 1123 HATWGPYLRSRFERITTLAGAVRGEAEAWTPTATPPWASGLTAAEHSALRGDLSVWRAAF 1182 Query: 1675 NKP---DLPDGKTEQAVREIAGQERDRAAITEREAALPEGVLREPQRVREAVREIARENL 1731 + P G + Q+ + + + + E VR A Sbjct: 1183 DVPEDHARATGPVQPGASTAPHQQDLERRV-RSVLGVHRADDELLELMPEEVRTDAEFGR 1241 Query: 1732 LQERLQQM 1739 L ERL + Sbjct: 1242 LSERLGAL 1249 >UniRef50_B3DCU7 Relaxase n=2 Tax=Burkholderia multivorans ATCC 17616 RepID=B3DCU7_BURM1 Length = 1156 Score = 301 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 131/569 (23%), Positives = 225/569 (39%), Gaps = 87/569 (15%) Query: 1 MMSIAQVRSAGSAGNYYTD---------KDNYYVLGSMGERWAGRGAEQLGLQGS-VDKD 50 M+S +RS A Y+ DNYYV W GRGA+ LG++G V K+ Sbjct: 1 MISKEPIRSVADAARYHDKSFNKDAGKKADNYYVNEKATAHWQGRGADFLGIRGKAVTKE 60 Query: 51 VFTRLLEGR--LPDGADLSRMQD--GSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAH 106 F + L GR PD + + + ++ R G D T + PKSVS+ A++G D R+I AH Sbjct: 61 EFIQFLSGRMPHPDTGKIQNLANNSKGDKRRAGIDFTIAPPKSVSIAALVGKDDRVIAAH 120 Query: 107 NQAVDFAVRQVEALASTRVMTD--GQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVAN 164 A + E AS + D G++ + GNL+ A H+T+R+ EPQLH H V+ + Sbjct: 121 LAANARTMEWFEKHASLIRVKDEKGRNRPEVAGNLLYATVLHETNRENEPQLHNHNVIVS 180 Query: 165 VTQHNGE--WKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHG 222 W++L++D +Y + +Y+ +L + LGY+ Sbjct: 181 AVYDGARHSWRSLTNDL---------LYTLRARGDIIYKAELAAALRHLGYQLVYAENGI 231 Query: 223 MWEMPGVPVEA---FSGRSQTIREAVGED------ASLKSRDVAALDTRKSKQHVDPEIK 273 +E+ G + FS R+ +REA+ + AS +R VA LD+R +KQ EI Sbjct: 232 DFELKGFSRDHVDTFSTRAVQVREALLKHGIDPGEASFDARRVAKLDSRAAKQEHPREIL 291 Query: 274 MAEWMQTLKETGFDIRAYRDAADQR-------------------------ADLRTLTPGP 308 + W +T KE D+ + + A + R Sbjct: 292 QSVWEETAKEANLDVASIVERAREAFADRQVPRRGVERTVEHGAAMGQDSGPSRGAAVSV 351 Query: 309 ASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISRE 368 ++ + +AV+ AI L+ER+ FT D+ + I ID+ + Sbjct: 352 SNDARANALRAVSWAIEHLTEREQAFTLVDLEVTALKFSRG---SISEIEWAIDQHVRNH 408 Query: 369 QLIP---LDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPE--------------- 410 L+ + +T+ + +EL + Q V + E Sbjct: 409 MLVDRGITVGGQIQYTTHKAIDNELKLAEHILAGRGQGNVVLDAEDQFDAAVAAFEAKKT 468 Query: 411 ----KSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQII 466 + + A + S+ + G+ G G+ +A + +A+ G EV + Sbjct: 469 AEIGEQFKLSGEQIQAARNVLMHEDSIQGIQGEAG-TGKTAALAMVKDVAQAMGWEVIGV 527 Query: 467 AADRRSQMNMKQDERLSGELITGRRQLLE 495 A + ++ + + + G + Sbjct: 528 ATSAAAAKELEASSGIQSDTVAGYFAKRD 556 Score = 159 bits (402), Expect = 8e-37, Method: Composition-based stats. Identities = 90/490 (18%), Positives = 157/490 (32%), Gaps = 56/490 (11%) Query: 1040 AQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGD 1099 A+T A R D TL ++DESS+ G D + G R V GD Sbjct: 708 ARTQAKL-----ENLRRYGNVDGKKTLIVMDESSLTGVDDTEKLLRFAREIGARTVLQGD 762 Query: 1100 TDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVK 1159 Q ++A G+ F + +V+I++E R + +L + + + Sbjct: 763 VKQHGSVAAGRAFEQA-QIAGMNVSILEETRRFRDATAQTRQALADMKAGNYAQAIARLD 821 Query: 1160 PSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGR 1219 +V + A E AK +A + Sbjct: 822 TLRVAESDLAKTVAERYLENLQELTAKGVDAPKVG------------------------- 856 Query: 1220 TPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLST 1279 +V N DR+++N+ +H G + P L+ + E R S Sbjct: 857 ---------VVAITNSDRKLINAAVHQALTDVGIISGPHFEKPHLDDPKMTGAEQRYASM 907 Query: 1280 WETHRDALVLVDNVYHRI----------AGISKDDGLITLQDAEGNTRLISPREAVAEGV 1329 +R ++ Y I G I +A+G + I+P+ Sbjct: 908 LSRNRVDALIYRKSYREIGVEKGDVLTVTGYDVQKNRIYALNAKGKSVEINPQRQDYFSP 967 Query: 1330 TLYTPDTIRV--GTGDRMRFTKSDRERG-YVANSVWTVTAVSGDSVTLSDGQQTREIRPG 1386 + V R +E + + A+ + + +E Sbjct: 968 AIQESRVFAVGDRVETRAIIRLPGQELNRLDNGTQGVIVAIDSLGAKIRWYRDGKESDLK 1027 Query: 1387 QEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVY 1446 + + +D AYA T++ QGA+ I G R + E+AYVA SR K + ++ Sbjct: 1028 ND-DLRFVDHAYAHTSYKEQGATNHREIVAVSKIGAR--VFNREAAYVAASRAKDNTEII 1084 Query: 1447 TDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGL 1506 T + V K TA + + + + A +VA R+V + L Sbjct: 1085 TSDLDTLLRNAGREVGKTTAVEFERAESSLDQSADQGAKHGATRSIEVAPTRSVETERTL 1144 Query: 1507 AGGDSPARFI 1516 P + Sbjct: 1145 ERSPDPGNLL 1154 >UniRef50_UPI00005104AE conjugative relaxase domain protein, TrwC/TraI family n=1 Tax=Brevibacterium linens BL2 RepID=UPI00005104AE Length = 1183 Score = 300 bits (768), Expect = 3e-79, Method: Composition-based stats. Identities = 158/1053 (15%), Positives = 296/1053 (28%), Gaps = 204/1053 (19%) Query: 22 NYYVLGSMGERWAGRGAEQLGLQ--------GSVDKDVFTRLL-EGRLPDGADLSRMQ-- 70 Y GS W G G L +V ++ RLL +G P Sbjct: 30 YYTESGSPPGTWLGTGLASLDDGTGTGVDEGSTVTEEHLARLLGQGVHPVTGAKLGHAYP 89 Query: 71 --------------------------------------DGSNRHRPGYDLTFSAPKSVSM 92 G+DLTFS PKS+S Sbjct: 90 SLRPPRERIADRVAKLAPDMPAAQREVMIQDIRDEEAARKPKSAIAGFDLTFSPPKSLST 149 Query: 93 MAMLGGD---KRLIDAHNQAVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTS 149 + + + L AH+ A+ V +E ++ + G + ++ F+H S Sbjct: 150 LWGVADAPMQELLAQAHHAAMRDTVAMLEERVASTRVGKGGIARMPITGVIATAFDHYDS 209 Query: 150 RDQEPQLHTHAVVANVTQ-HNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQV 208 R +PQLHTH VV+N Q +G+W++L S ++ K +A Y L + Sbjct: 210 RAADPQLHTHLVVSNKVQGEDGKWRSLDSRRLHKA---------TVALSASYNAYLIDHT 260 Query: 209 EA-LGYETEVV----GKHGMWEMPGVPVE---AFSGRSQT---------------IREAV 245 LG E V ++ WE+ G+P E FS RS IR+ Sbjct: 261 ADLLGLTWEPVDRGKDRNTGWEITGIPAELIAEFSRRSTGSSGGVEGIEQAKNRLIRDYR 320 Query: 246 GEDA-------SLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQR 298 + R A L+TR K+ A+W + Sbjct: 321 DAHGHAPSPDTIARLRQQATLETRPEKELHSLAELTADWRERATRLLGTDATTWAQDVLT 380 Query: 299 ADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGIL-PPENGVIERA 357 V+ + +++R+ +T ++ A + L Sbjct: 381 RTPDASRLRAEDLGAQQVEDLAAVVVMTVADRRSTWTRWNLHAEAMRQLMSTRFTTPAER 440 Query: 358 RAGIDEAISREQLIPLD-----------------------REKGLFTSGIHVLDELSVRA 394 A +D+ ++ + L ++ ++S + E + Sbjct: 441 TAVLDQIVAGAEAQSLRLTPEYDRAVPGHYVDGSGNRFQSSDQVAYSSQEILDAEHRLLK 500 Query: 395 LSRDI-------MKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRE 447 + D R + V + AV+ +A SL ++ G G AG+ Sbjct: 501 HADDTSAPRLPSRMVARHVSRKIQGVRLADDQAAAVTRIACSGRSLDLLVGPAG-AGKTT 559 Query: 448 RVAELVMMA--REQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGM--AFTPGS 503 + L R V +A + + + + E E F PG Sbjct: 560 ALRGLHRAWTARHGQGSVIGLAPSAAAAEVLGESLGVQAENTAKFLYEHERGRWDFQPGQ 619 Query: 504 TVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGT---GSALMAMKDAGVNTYRW 560 +++D+ + + A + ++++ + + G A + Sbjct: 620 LILLDEASLAGTLTLDRIAEHAGQAGAKLVLVGDPAQLSSVETGGAFGMLVRHRPGPPTL 679 Query: 561 QGGEQRPATIISEPDRNVRYARLA------------------------GDFAASVKAGEE 596 + ++R + A + G Sbjct: 680 TDARRFVHEWEKTASLDLRRGKTAVLEDYENHGRLVDGSIERMLDAAYTAWQQDRDEGLA 739 Query: 597 SVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVM 656 ++ A L R +L G + + + + L R + Sbjct: 740 TLMIAGNAEMVAELNTRAREDLIADGRVERDGIGLH----DGTTAGVGDLVVTRRNDRQL 795 Query: 657 EQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGE 716 ++ DR+ + R R G V R+ D G Sbjct: 796 SLGRSWVKNGDRWSVAR----------RLENGALAVRRLGPGDQP------------AGA 833 Query: 717 RLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVE 776 L + + V G V ++ V + D + +L Sbjct: 834 ELVLPAEYVAEDVELGYATTVHRAQGASVDTVH---------ALVDPETASRELFY-VAM 883 Query: 777 TPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTA-----EKLARHP 831 T G + + + ++ T L R + R+ + D +A ++ RH Sbjct: 884 TRGKQNNTAYIIQPDPHEIEPHLETAEPLTRIEQLHRVLARSDADLSATETLKHEVDRHA 943 Query: 832 SFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVD----- 886 S + + A E +E + ++ A A P E + A + + Sbjct: 944 SLATLVHEYDVLAREAQVERSAAYLDVAPFPEAVADDVFTSPHYEQLEAAITRHEATGHS 1003 Query: 887 ---LLTEAKSFAAEGTGFTELGGEINAQIKRGD 916 +LT + + + + I Sbjct: 1004 PTRVLTALAPRLQPTSDEADPAAHLASMIDTAT 1036 Score = 173 bits (437), Expect = 6e-41, Method: Composition-based stats. Identities = 163/1241 (13%), Positives = 340/1241 (27%), Gaps = 167/1241 (13%) Query: 507 VDQGEKLSLKETLTLLDGA--ARHNVQVLITDSGQRTGTGSALMAMKDAGVNTYRWQGGE 564 VD+G ++ + LL ++ R + + Q Sbjct: 57 VDEGSTVTEEHLARLLGQGVHPVTGAKLGHAYPSLRPPRERIADRVAKLAPDMPAAQREV 116 Query: 565 QRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVL 624 E R + A D S ++ V+ Q +L QA + ++ + Sbjct: 117 MIQDIRDEEAARKPKSAIAGFDLTFSPPKSLSTLWGVADAPMQELLAQAHHAAMRDTVAM 176 Query: 625 GLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLR 684 V T + + + V ++V + R Sbjct: 177 LEERVASTRVGKGGIARMPITGVIATAFDHYDSRAADPQLHTHLVVSNKVQGEDGK--WR 234 Query: 685 DAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDA 744 +L +S++ + + + L +T + ++ + + Sbjct: 235 SLDSRRLHKATVALSASYNAYLID----HTADLLGLTWEPVDRGKDRNTGWEITGIPAE- 289 Query: 745 MTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNG 804 + R+ ++ V +L + + GH+ + + Sbjct: 290 LIAEFSRRSTGSSGGVEGIEQAKNRLIRDYRDAHGHAP----------SPDTIARLRQQA 339 Query: 805 LARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPA 864 + + L+S + T + A T + + T + + + Sbjct: 340 TLETRPEKELHSLAELTADWRERATRLLGTDATTWAQDVLTRTPDASRL-RAEDLGAQQV 398 Query: 865 QQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEG--TGFTELGGEINAQIKRGDLLYVDV 922 + + + V ++ ++ +L EA T E ++ + + + + Sbjct: 399 EDLAAVVVMTVADRRSTWTRWNLHAEAMRQLMSTRFTTPAERTAVLDQIVAGAEAQSLRL 458 Query: 923 AKGYGTGL-------------------LVSRASYEAEKSILRHILEGKEAVMPLM----E 959 Y + S+ +AE +L+H + +P Sbjct: 459 TPEYDRAVPGHYVDGSGNRFQSSDQVAYSSQEILDAEHRLLKHADDTSAPRLPSRMVARH 518 Query: 960 RVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPR 1019 +L Q AA I + ++ G AG GKTT R + A + Sbjct: 519 VSRKIQGVRLADDQAAAVTRIACSGRSLDLLVGPAGAGKTTALRGLHRAWT--ARHGQGS 576 Query: 1020 VVGLGPTHRAVGEMRSA-GVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNT 1078 V+GL P+ A + + GV A+ A FL++ + G L LLDE+S+ G Sbjct: 577 VIGLAPSAAAAEVLGESLGVQAENTAKFLYEHE----RGRWDFQPGQLILLDEASLAGTL 632 Query: 1079 DMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELRE 1138 + R G + V GD QL ++ G F + + + R E + Sbjct: 633 TLDRIAEHAGQAGAKLVLVGDPAQLSSVETGGAFGMLVRHRPGP-PTLTDARRFVHEWEK 691 Query: 1139 AVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKG 1198 + + A L + + L Sbjct: 692 TASL-----------------------------------DLRRGKTAVLEDYENHGRLVD 716 Query: 1199 EAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQ 1258 + + Y A +D + TL++ E LN+ + G + ++ Sbjct: 717 GSIERMLDAAYTAWQQDR-----DEGLATLMIAGNAEMVAELNTRAREDLIADGRVERDG 771 Query: 1259 VMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRL 1318 + + TA + D + R + + + + +A ++ L + G+ Sbjct: 772 IGLHDGTTAGVGDLVVTRRNDRQLSLGRSWVKNGDRWSVARRLENGALAVRRLGPGDQ-- 829 Query: 1319 ISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQ 1378 P A Y + + + TV G SV Sbjct: 830 --PAGAELVLPAEYVAEDVEL-------------------GYATTVHRAQGASV------ 862 Query: 1379 QTREIRPGQEQAEQHIDLAY-AITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVA-- 1435 + + +L Y A+T +G A ++ + A Sbjct: 863 --DTVHALVDPETASRELFYVAMT----RGKQNNTAYIIQPDPHEIEPHLE-----TAEP 911 Query: 1436 LSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVA 1495 L+R + + + +A + + + DR A + R+ Sbjct: 912 LTR-----------IEQLHRVLARSDADLSATETLKHEVDRHASLATLVHEYDVLAREAQ 960 Query: 1496 AGRAVLRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLT-------- 1547 R+ ++ A + Y Q A+ + G S L L Sbjct: 961 VERSAAYLDVAPFPEAVADDVFTSPHYEQLEAAITRHEATGHSPTRVLTALAPRLQPTSD 1020 Query: 1548 ----TDDGNGLRGFSGEGRVKGSGDAQFVALQGSRNGESLLADNMQDGVRIAR------- 1596 + + G L ++M+ +R Sbjct: 1021 EADPAAHLASMIDTATAQMTHGRTSTPGRVGGLIARPAEPLDEDMRTALRQREALIDAAA 1080 Query: 1597 -DNPDSGVVVRIAGEGRPWNPGAITGGRVWGDIPDNSVQPGAGNGEPVTAEVLAQRQAEE 1655 D V ++ + PG T R W ++ + +A L + E Sbjct: 1081 GAALDEAVDHKVGWATQLGAPGPSTREREWWRAHAVTIALYRQRYDIQSAAPLGSDKDVE 1140 Query: 1656 AIRRETERRADEIVRKMAENKPDLPDGKTEQAVREIAGQER 1696 + ++ ERR ++ + + ER Sbjct: 1141 SPQQADERRTAQVAYSRLRTQHSSSSLPRPERTSARRTSER 1181 >UniRef50_B8KYV8 Putative trwC protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8KYV8_9GAMM Length = 975 Score = 300 bits (767), Expect = 4e-79, Method: Composition-based stats. Identities = 139/816 (17%), Positives = 248/816 (30%), Gaps = 143/816 (17%) Query: 2 MSIAQVRSAGSAG--------NYYTDKDNYYVLGSMGERWAGRGAEQLGL-QGSVDKDVF 52 ++ S A YY DKD W G+ A L L +V ++ Sbjct: 7 LTAQGTDSKSGAAVVEYLMLTEYYLDKDG---NAQDTMAWGGKMAAHLNLLSTAVTRESM 63 Query: 53 TRLLEGRLPDGADLSRMQDGSNRHRP---------------------------GYDLTFS 85 ++L EG P G GYD+T S Sbjct: 64 SKLAEGFDPQTGRALCQNAGQKGKVRPKVDKNGDPVLDAQGKPEVVVVGGHRVGYDVTVS 123 Query: 86 APKSVSMMAMLGGDKR---LIDAHNQAVDFAVRQVEALASTRVMTDGQSETVLTGNLVMA 142 APK V ++ + +R ++ AH A A+ ++E + TR G+ + LV + Sbjct: 124 APKDVGILFAMESPERRDAVLKAHQAASAEAMNRLEQMVETRRGKGGKD-VIGVKGLVWS 182 Query: 143 LFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYRE 202 H RD + LHTH +V V L +D T +Y + A +Y+ Sbjct: 183 SHQHFAGRDLDMDLHTHHLVYGV--------ALGADGKESTFDAVEIYRHARAMDEIYKL 234 Query: 203 KLKEQVEALGYETEVVGK---------HGMWEMPGVP---VEAFSGRSQTIREAVGEDAS 250 +L + ++ LGY+ E V + + G+ ++ FS R + + E + Sbjct: 235 ELYKNLQGLGYQVEHVRELDDDGKETNRSYARLAGIDQDVIDHFSKRRKALLEYAEQHGV 294 Query: 251 LKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPAS 310 A TRK K + W + LK AA D Sbjct: 295 ST--QQANKATRKHKNEPTYTELVEHWQEALKGFDLTPETL-KAAQGNLDKVEHKSDAEL 351 Query: 311 QDGPDVQQAVTQAIAGL----SERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAIS 366 + +AV I + E + + AR V+ A DE Sbjct: 352 LELLHENEAVFNDIDLVRVLGMEYAGKLDAAGLHARIEQFKQDNGLVLVNAERLADE--D 409 Query: 367 REQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTV------------HPEKSVP 414 R Q + + F + + E +V ++ + + K Sbjct: 410 RGQTLARKHTEDRFCAPWMLQAEQAVVDIANRRANETQHHASQATVDRVIEDYQKAKGFQ 469 Query: 415 RTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQM 474 + AV+ + + +A +SG G G+ +G + + ++ Sbjct: 470 LSQEQLVAVNHICRGSGGVANLSGLAG-TGKTTISELYKEALESEGMVLLGVCVSNKAAQ 528 Query: 475 NMKQDERLSGELITGRRQ--LLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQV 532 ++ + + + P +++D+ + ++T LL A + +V Sbjct: 529 KLEGESGMPSVSMAQMLHDLAEGKRELQPNDVLVIDEAGMVDTRDTRALLAYAEKAKSKV 588 Query: 533 LITDSG---QRTGTGSALMAMKDA----GVNTYRWQGGEQRP------------------ 567 ++ Q G GS K A + R Q ++ Sbjct: 589 ILQGDAEQLQPIGAGSGFQLTKQAVGDVKLTEIRRQARQEDRETAMGFYAKNENGEVVDL 648 Query: 568 ----------------------ATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVR 605 +I+ + RL D+ + A ++ + Sbjct: 649 KKGTRSRRETLELGDEQKERLMDSIVEAHSQEKCIERLVNDYFKNPAALDDKLVLAHSRA 708 Query: 606 EQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRS 665 E L IR LK +G +G EV + R G + +S Sbjct: 709 EVGALNAGIRKGLKERGEIGTDEVVVEGRVNG------RKFDLALVEGDRVMFT---AKS 759 Query: 666 HDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSS 701 D V++ A S+ + G V + S + Sbjct: 760 KDLGVVNGTQATIQSIKASRSGGYDIVGALRSENPK 795 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 132/781 (16%), Positives = 240/781 (30%), Gaps = 139/781 (17%) Query: 804 GLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTP 863 L + + T + +V + G + + L Sbjct: 284 ALLEYAEQHGVSTQQANKATRKHKNEPTYTELVEHWQEALKGFDLTPETLKAAQGNLDKV 343 Query: 864 AQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYV--- 920 ++ L ++ + F+ +DL+ A L I + L+ V Sbjct: 344 EHKSDAELLELLHENEAVFNDIDLVRVLGMEYAGKLDAAGLHARIEQFKQDNGLVLVNAE 403 Query: 921 ---------DVAKGYGTGLLVSRASYEAEKSILRHILEGKE---------AVMPLMERVP 962 +A+ + + +AE++++ V ++E Sbjct: 404 RLADEDRGQTLARKHTEDRFCAPWMLQAEQAVVDIANRRANETQHHASQATVDRVIEDYQ 463 Query: 963 GELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVG 1022 +L+ Q A I S + G AG GKTT + ESE ++G Sbjct: 464 KAKGFQLSQEQLVAVNHICRGSGGVANLSGLAGTGKTT----ISELYKEALESEGMVLLG 519 Query: 1023 LGPTHRAVGEMR-SAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMA 1081 + +++A ++ +G+ + ++A LHD G+ N + ++DE+ MV D Sbjct: 520 VCVSNKAAQKLEGESGMPSVSMAQMLHDL----AEGKRELQPNDVLVIDEAGMVDTRDTR 575 Query: 1082 RAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVY 1141 A + + GD +QLQ I G F+L + + EI RQ Sbjct: 576 ALLAYAEKAKSKVILQGDAEQLQPIGAGSGFQLTKQAVGD--VKLTEIRRQA-------- 625 Query: 1142 SLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAF 1201 D E A+ + +V + E Q+ +L ++ +A + Sbjct: 626 --RQEDRETAMGFYAKNENGEVVDLKKGTRSRRETLELGDEQKERLMDSIVEAHSQ---- 679 Query: 1202 PDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMV 1261 E +V DY + P A + L++ H + LN+ I ++ GE+G ++V+V Sbjct: 680 ----EKCIERLVNDYF-KNPAALDDKLVLAHSRAEVGALNAGIRKGLKERGEIGTDEVVV 734 Query: 1262 PVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISP 1321 G L+ E R + G I + G + + Sbjct: 735 EGRVN-----GRKFDLALVEGDRVMFTAKSKDLGVVNGTQATIQSIKASRSGGYDIVGAL 789 Query: 1322 REAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTR 1381 R + +G V + + Sbjct: 790 RSENPKE---------------------------------------NGRKVVWNTHEHKA 810 Query: 1382 EIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSR-MK 1440 + YA+T H +QG + L M S+ VA +R K Sbjct: 811 VVHD------------YAVTVHKSQGQGKREVFHLM-----NLGMMDNASSLVAFTRLTK 853 Query: 1441 QHVQVYT--DNRQGWTDAINNAVQKGTAHD-----------------VFEPKPDREVMNA 1481 H ++Y D+ + + K T D V P R Sbjct: 854 GHYRLYGTYDDVEQLNTRLGLERLKATVLDAGLKDDPQRPVVQRPGAVARPTTQRPAAQR 913 Query: 1482 ERLFSTARELRDVAAGRAVLRQAGLAGGDSPARF----IAPGRKYPQPYVALPAFDRNGK 1537 R+ L A R + ++ G+ AR+ + P R+ Q LPA N + Sbjct: 914 TRIQGKLDALLKEHAERP---KPQMSEGERKARWLLEVLEPLRRARQASPKLPAQSPNHR 970 Query: 1538 S 1538 Sbjct: 971 Q 971 >UniRef50_A3TJZ6 Transfer protein Tra-like n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TJZ6_9MICO Length = 1920 Score = 296 bits (756), Expect = 7e-78, Method: Composition-based stats. Identities = 149/949 (15%), Positives = 261/949 (27%), Gaps = 138/949 (14%) Query: 39 EQLGLQGSVDKDVFTRLLEGRLPDGAD----LSRMQDGSNRHRPGYDLTFSAPKSVSMMA 94 E+ ++ V + FT D + +++ GYDLTFS KS+S + Sbjct: 148 ERAQIRTQVAVEFFTAEHNRPPADAREVAATIAKRSRQRTTAVAGYDLTFSPVKSISTLW 207 Query: 95 MLGGDK---RLIDAHNQAVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRD 151 + + ++ AH++AV A+ +E A V V F H SR Sbjct: 208 AVAPREVAAQIELAHHEAVGDALAFIEKHALYTREGARGVRQVDVTGFVATAFTHRDSRS 267 Query: 152 QEPQLHTHAVVANVTQH-NGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVE- 209 +P LHTH VAN Q G+W + + K + Y +++ + Sbjct: 268 GDPDLHTHVAVANKVQTLAGKWLAIDGRVLFKAN---------VTASETYNTAIEKHLRT 318 Query: 210 ALGYETEVVG-----KHGMWEMPGVPV---EAFSGRSQTIREAVGEDASL---------- 251 LG K + E+ GV E +S R +I+ E A+ Sbjct: 319 RLGLTFTERACTDRSKRPIREVVGVDPRLNERWSTRRASIQARRSELATAFQSDHGRPPT 378 Query: 252 -----KSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTP 306 A L+TR +K + + A A T TP Sbjct: 379 VIESIHLAQQATLETRDAKHEPRTLTEQRTTWAREAQVVLGGPDAVTAMVTAALSSTTTP 438 Query: 307 GPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAI- 365 D V+ + + L + + V A + + E+ A +D + Sbjct: 439 ATPGVDAAWVRSTASTILDTLQGGRSTWQVWHVRAEAQREVRAVDLPPEQVEAVVDLLVG 498 Query: 366 -------------------------SREQLIPLDREKGLFTSGIHVLDELSVRALSRDIM 400 + LFT+ + E + + Sbjct: 499 EVLTARSVRITRPQDDVVEPEELRRRDGSSVYEAAGSALFTAAAILAAEQRLVETAGRCD 558 Query: 401 KQN--------RVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAEL 452 + + V AG + V +A L + G G+ + L Sbjct: 559 GRRAGEDAVAIALLEQAANRVTLNAGQTALVRGMATSGARLQLAIAPAG-TGKTTAMQAL 617 Query: 453 VMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFT-------PGSTV 505 E G V +A + +++ + + + G+ V Sbjct: 618 AAAWAEDGGTVIGLAPSAAAAAVLREQLGAGTDTLAKLTWSIADHDLPDWAENIGAGTLV 677 Query: 506 IVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMKDAGVNTYRWQGGEQ 565 +VD+ +D V + Q+ A ++D G Sbjct: 678 MVDEAGMADTLSLAAAVDFVVGRGGSVRLIGDDQQLAAIGAGGVLRD-----IVATHGAL 732 Query: 566 RPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLG 625 + ++ D A LA ++ G R++ + Sbjct: 733 HLSELMRFVDPAEGAASLA------LRDGHPEALGFYLDRDRIHVGD------------- 773 Query: 626 LPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRD 685 + ++ + +R + M+ + + R R+ + +R Sbjct: 774 -----LAVVTHDVFTAWARDRGNGLDSIMLAPTRELVSELNQRAQAHRLNNTNSGAGVRL 828 Query: 686 AQGETQVVRISSLDSSWSLFRPEKMPVADGE-RLRVTGKIPGLRVSGGDRLQVASVSEDA 744 A G T + E++ E RLRV+ V GDR V + D Sbjct: 829 ADGNT-------------AYVGEQVITRTNERRLRVSATDW---VKNGDRWTVLAAGVDG 872 Query: 745 MTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNG 804 V R A +L VS T+ T Sbjct: 873 SLRVRHARHGRVITLPRTYVTGATELGYATTVHGAQGVSAD-TMHGLATGTESRQQLYTM 931 Query: 805 LARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPA 864 L R L+ + + R P I G + + + + L A Sbjct: 932 LTRGRHANHLHLQVVGDGDPHAVIR-PENLHPQTAIDLLQGILARDNSPISASTMLREQA 990 Query: 865 QQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIK 913 A LA VD L A + L + + Sbjct: 991 DPATRLA-------DATARYVDALHVAAEHHLGRSTIAGLDAGADRVVD 1032 Score = 132 bits (330), Expect = 2e-28, Method: Composition-based stats. Identities = 158/1253 (12%), Positives = 279/1253 (22%), Gaps = 185/1253 (14%) Query: 542 GTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQV 601 G S + G R + + +R F A Sbjct: 116 GDVSVFRLEVAQRLEELAASQGHPRDYPLTVDERAQIRTQVAVEFFTAEHNRPP-----A 170 Query: 602 SGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDS-----RSRYLRDMYRPGMVM 656 A + + R L + ++S +W + L G + Sbjct: 171 DAREVAATIAKRSRQRTTAVAGYDLTFSPVKSISTLWAVAPREVAAQIELAHHEAVGDAL 230 Query: 657 EQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGE 716 D + K+ G+ Sbjct: 231 AFIEKHALYTREGARGVRQVDVTGFVATAFTHRDSRS--GDPDLHTHVAVANKVQTLAGK 288 Query: 717 ------RLRVTGK-----------IPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLP 759 R+ LR G + ++ + + L Sbjct: 289 WLAIDGRVLFKANVTASETYNTAIEKHLRTRLGLTFTERACTDRSKRPIREVVGVDPRLN 348 Query: 760 VSDSPFTAL------KLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVR 813 S A +L + G + ++ + + Sbjct: 349 ERWSTRRASIQARRSELATAFQSDHGRPPTVIESIHLAQQATLETRDAKHEPRTLTEQRT 408 Query: 814 LYSSLDETRTAEKLARHPSFTVVS--EQIKTRAGETSLETAISHQKSALHTPAQQAIHLA 871 ++ + A T G + + ++ Sbjct: 409 TWAREAQVVLGGPDAVTAMVTAALSSTTTPATPGVDAAWVRSTASTILDTLQGGRSTWQV 468 Query: 872 LPVVESKKLAFSMVDL----LTEAKSFAAEGTGFTE---LGGEINAQIKRGDLLYVDVAK 924 V + VDL + + + ++ +L D + Sbjct: 469 WHVRAEAQREVRAVDLPPEQVEAVVDLLVGEVLTARSVRITRPQDDVVEPEELRRRDGSS 528 Query: 925 GY---GTGLLVSRASYEAEKSILRHI-----LEGKEAVMPLMERVPGELMEKLTSGQRAA 976 Y G+ L + A AE+ ++ E + + L +GQ A Sbjct: 529 VYEAAGSALFTAAAILAAEQRLVETAGRCDGRRAGEDAVAIALLEQAANRVTLNAGQTAL 588 Query: 977 TRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA 1036 R + + R + AG GKTT M A+ + V+GL P+ A +R Sbjct: 589 VRGMATSGARLQLAIAPAGTGKTTA----MQALAAAWAEDGGTVIGLAPSAAAAAVLREQ 644 Query: 1037 -GVDAQTLASFLHDTQLQQRSG-ETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRA 1094 G TLA + TL ++DE+ M +A A + GG Sbjct: 645 LGAGTDTLAKLTWSIADHDLPDWAENIGAGTLVMVDEAGMADTLSLAAAVDFVVGRGGSV 704 Query: 1095 VASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSG 1154 GD QL AI G R A + E++R A + AL Sbjct: 705 RLIGDDQQLAAIGAGGVLRDIVATHGA--LHLSELMRFVDPAEGAASLALRDGHPEALGF 762 Query: 1155 LESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVR 1214 + + V ++ A R Sbjct: 763 Y-----------------------------------LDRDRIHVGDLAVVTHDVFTAWAR 787 Query: 1215 DYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGEL 1274 D ++++ E LN R G + Sbjct: 788 DR-----GNGLDSIMLAPTRELVSELNQRAQAHRLNNTNSGAGVRLADGNTAYVGEQVIT 842 Query: 1275 RRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTP 1334 R + + + DG + ++ A + PR V L Sbjct: 843 RTNERRLRVSATDWVKNGDRWTVLAAGV-DGSLRVRHARHGRVITLPRTYVTGATELGYA 901 Query: 1335 DTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHI 1394 T+ G +D G + +Q + + H+ Sbjct: 902 TTVHGAQG-----VSADTMHGLATGTE---------------SRQQLYTMLTRGRHANHL 941 Query: 1395 DLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAY--VALSRMKQHVQVYTDNRQG 1452 +G+ + E+ + A+ Sbjct: 942 -------------------HLQVVGDGDPHAVIRPENLHPQTAI--------------DL 968 Query: 1453 WTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSP 1512 + +A + + D A+ L VAA + R Sbjct: 969 LQGILARDNSPISASTMLREQADPATRLADATARYVDALH-VAAEHHLGRSTIAGLDAGA 1027 Query: 1513 ARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGEGRVKGSGDAQFV 1572 R + P G G L L T G+ +G+ Sbjct: 1028 DRVVDGITDDPAWPTLRARLILLGAHGGDPLTHLQTAVGSRELDTAGDRAAVLDWRLDDT 1087 Query: 1573 ALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPGAITGGRVWGDIPDNS 1632 L + G + +R +P T ++ + Sbjct: 1088 GLGNAGPGPLPWLPGIPAALRT--------------------HPTWGTYLAARANLVTDL 1127 Query: 1633 VQPGAGNGEPVTAEVLAQRQAEEAIRRETERRADEIVRKMAENKPDLP----DGKTEQAV 1688 V A + R + AD V + A P K Sbjct: 1128 ATQVHDRSHTAPPPVWACQG---RGRLDARTLADITVWRAATGVPGTDHRPTGPKQPAKA 1184 Query: 1689 REIAGQERDRAAITEREAALPEGVLREPQRVREAVREIARENLLQERLQQMER 1741 + D AL E VR A +L ERL + R Sbjct: 1185 AALWQHTLDARVTDGHSPALAEWGPLLEAIAP-TVRSDAFTPVLAERLAAISR 1236 >UniRef50_B2TH74 Conjugative relaxase domain protein n=1 Tax=Burkholderia phytofirmans PsJN RepID=B2TH74_BURPP Length = 1486 Score = 294 bits (752), Expect = 2e-77, Method: Composition-based stats. Identities = 152/648 (23%), Positives = 248/648 (38%), Gaps = 91/648 (14%) Query: 896 AEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVM 955 EG + I+ G L+ + +R + E IL G+ V Sbjct: 907 VEGYSPERAQRTVEESIRNGRLVETE-------QRFTTREMRQTESEILWMERTGRGTVE 959 Query: 956 PLMERVPGELME---KLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVN-- 1010 PL E M L GQ+ A +++L + +RF +QGYAGVGK+ V+ + Sbjct: 960 PLRTAEQAEAMLASTGLNPGQKEAAQLVLTSPNRFIGIQGYAGVGKSHLMSTVVQEIKME 1019 Query: 1011 --MLPESERPRVVGLGPTHRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFL 1068 E+ +VVGL P ++ G+++QTLASFL T+ Sbjct: 1020 AAQQAETLGYKVVGLAPYGSQNKALQELGMESQTLASFLVREP-----DPELLGPKTIIF 1074 Query: 1069 LDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKE 1128 LDE+S+V M A + G R V GD Q QA+ G+PF Q +A + E Sbjct: 1075 LDEASVVSAHQMKDLMARVEQSGARLVMIGDRKQTQAVEAGKPFEQLQD-GGMALAHVTE 1133 Query: 1129 IVRQTP-ELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKL 1187 I RQ L+ AV N ++ ++ LE + Sbjct: 1134 IQRQKDATLKAAVEKAANNNIGGSVKLLEKNTVQLKKEK--------------------- 1172 Query: 1188 AEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDV 1247 + + DY E R+ TLIV NE RR +N ++ D Sbjct: 1173 -------------------ARHGRLADDYVKMPEEQRDGTLIVVGTNETRRKINELVRDK 1213 Query: 1248 REKAGELGKEQVMVPVLNTANIRDGELRRLSTWETH-------RDALVLVDNVYHRIAGI 1300 + E +V L + ++ E ++ S+++ L V++ + Sbjct: 1214 LKL-----PEGELVRALESYDMSRAEHKQASSYQQGVVLIAERPGEHGLDRGVHYTVRSA 1268 Query: 1301 SKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANS 1360 +T+ DA GN R + GV+ YT I + GD +R T++D +G Sbjct: 1269 DARGNTLTVSDAAGNVRSLDATHLS--GVSTYTLTDIPIVKGDWLRITRNDNRQGVFNGE 1326 Query: 1361 VWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTE 1420 V +V DSV L +G + + H YA T H AQG + + T Sbjct: 1327 RHRVLSVDKDSVVLENGAK------LSRASAIHAQHGYAQTVHSAQGLTRHGVLIEADT- 1379 Query: 1421 GNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMN 1480 R L + YVA+SR + +++YTD+ G + +K A ++ + + ++ + + Sbjct: 1380 --RSLTSNRAVWYVAISRAQHALKIYTDDAGGLARVMAREPKKYAALELRDERREKVIFD 1437 Query: 1481 AERLFSTARELRDVAAGRAVLRQAGLAGGDSPARFIAPGRKYPQPYVA 1528 A S +R L+ + G + L + R P + Q + Sbjct: 1438 A---LSASRTLQQQSRGAV---KKTLHADATKPRA-RPTHQARQSHQR 1478 Score = 266 bits (679), Expect = 6e-69, Method: Composition-based stats. Identities = 109/317 (34%), Positives = 157/317 (49%), Gaps = 27/317 (8%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRL 60 M++ V S+ A NYY + D+YY W G GA+ LGL+G VD+ +F LL+GRL Sbjct: 1 MLTFDFVGSSAEAANYYEETDDYYTKPGHRGEWDGEGAKALGLEGGVDRQIFMDLLDGRL 60 Query: 61 PDGADLSRM------QDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAV 114 PDG + + R G D TF+APKSVS++A++ D+R+I+AH+ AV A+ Sbjct: 61 PDGRQARKSMPHTQKDGSKSAPRLGIDFTFNAPKSVSIVALVKNDRRVIEAHDAAVKDAL 120 Query: 115 RQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ-HNGEWK 173 +E+ A R G S TG L++A F HD SRDQ+P LHTHAV N+TQ +G W Sbjct: 121 AMMESRAIARQKYRGISFREKTGKLIVAKFQHDLSRDQDPHLHTHAVTMNLTQRRDGRWV 180 Query: 174 TLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVEA 233 L++ E++ + G YR +L + + +GY+ +EM VP EA Sbjct: 181 ALAN---------EDMLKSVKVVGAYYRAQLAQYLTNMGYDIRATRNG--FEMASVPDEA 229 Query: 234 ---FSGRSQTIREAVG------EDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKET 284 FS RS+TI E + E A+ + + DTR K + EW L Sbjct: 230 IKLFSQRSRTIEEELAKSGLTRETATGELKQNITKDTRAEKTDANRAALRQEWANALAAA 289 Query: 285 GFDIRAYRDAADQRADL 301 G D+ + Sbjct: 290 GIDLGPMMADHEAAPVP 306 Score = 230 bits (585), Expect = 4e-58, Method: Composition-based stats. Identities = 89/625 (14%), Positives = 202/625 (32%), Gaps = 71/625 (11%) Query: 278 MQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQ--AIAGLSERKVQFT 335 ++ G + A+ D R + P Q + V Q + + Sbjct: 832 RAYMRSLGATEEVNDELANAVEDGRLVAELPLFQSAKSFSRDVHQQTIDPHFDKFRHDND 891 Query: 336 YTDVLA--RTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVR 393 + ++ E ERA+ ++E+I +L+ + FT+ E + Sbjct: 892 IHKLTKESWVSLLVNVEGYSPERAQRTVEESIRNGRLVETE---QRFTTREMRQTESEIL 948 Query: 394 ALSRDIMKQNRVTVHPEKSVP------RTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRE 447 + R E++ G +A ++ + G G G+ Sbjct: 949 WMERTGRGTVEPLRTAEQAEAMLASTGLNPGQKEAAQLVLTSPNRFIGIQGYAGV-GKSH 1007 Query: 448 RVAELVM--------MAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAF 499 ++ +V A G +V +A +++ + + + Sbjct: 1008 LMSTVVQEIKMEAAQQAETLGYKVVGLAPYGSQNKALQE-LGMESQTLASFLVREPDPEL 1066 Query: 500 T-PGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR---TGTGSALMAMKDAGV 555 P + + +D+ +S + L+ + ++++ ++ G ++D G+ Sbjct: 1067 LGPKTIIFLDEASVVSAHQMKDLMARVEQSGARLVMIGDRKQTQAVEAGKPFEQLQDGGM 1126 Query: 556 NTYRWQGGEQRPAT------------------------IISEPDRNVRYARLAGDFAASV 591 +++ + R+ RLA D+ Sbjct: 1127 ALAHVTEIQRQKDATLKAAVEKAANNNIGGSVKLLEKNTVQLKKEKARHGRLADDYVKMP 1186 Query: 592 KAGEESVAQVSGVRE-QAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMY 650 + + V G E + + + +R +LK + AL + Y Sbjct: 1187 EEQRDGTLIVVGTNETRRKINELVRDKLK-----LPEGELVRALESYDMSRAEHKQASSY 1241 Query: 651 RPGMVMEQWNPETRSHDR---YVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRP 707 + G+V+ P DR Y + A+ ++LT+ DA G + + + L S S + Sbjct: 1242 QQGVVLIAERPGEHGLDRGVHYTVRSADARGNTLTVSDAAGNVRSLDATHL-SGVSTYTL 1300 Query: 708 EKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTA 767 +P+ G+ LR+T V G+R +V SV +D++ + + +S + Sbjct: 1301 TDIPIVKGDWLRITRNDNRQGVFNGERHRVLSVDKDSVVLENGAK-------LSRASAIH 1353 Query: 768 LKLENGWVETPGHSVSDSATVFASVTQ--MAMDNATLNGLARSGRDVRLYSSLDETRTAE 825 + ++ + + T+ + ++R+ +++Y + D A Sbjct: 1354 AQHGYAQTVHSAQGLTRHGVLIEADTRSLTSNRAVWYVAISRAQHALKIY-TDDAGGLAR 1412 Query: 826 KLARHPSFTVVSEQIKTRAGETSLE 850 +AR P E R + + Sbjct: 1413 VMAREPKKYAALELRDERREKVIFD 1437 >UniRef50_A5CLM4 Putative conjugal transfer protein, Dtr system n=1 Tax=Clavibacter michiganensis subsp. michiganensis NCPPB 382 RepID=A5CLM4_CLAM3 Length = 1492 Score = 293 bits (750), Expect = 3e-77, Method: Composition-based stats. Identities = 165/963 (17%), Positives = 284/963 (29%), Gaps = 132/963 (13%) Query: 38 AEQLGLQGSVDKDVFTRLLEGRLPDGADLSR-----MQDGSNRHRPGYDLTFSAPKSVSM 92 AE+ L + + R +GR P + G+DL S KSVS+ Sbjct: 141 AEERRLIRAREGAQAFRDAKGREPADKEELGKFITAATRPDQTAVAGFDLVCSPSKSVSV 200 Query: 93 MAMLGGDK---RLIDAHNQAVDFAVRQVEALA-STRVMTDGQSETVLTGNLVMALFNHDT 148 + LG + + A QAV + +E A +TR T+G ++ + G + +F H Sbjct: 201 LWALGDTETRKAIEAAQEQAVRDTIGYLEREAIATRAGTNGVAQIEVEGGIAATVFRHYD 260 Query: 149 SRDQEPQLHTHAVVANVTQH-NGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQ 207 SR+ +PQLH H VVAN + +G+W+T+ S + + + + N + R Sbjct: 261 SRNGDPQLHDHVVVANKVKGVDGKWRTIDSKLLHRMNVPASEFYNAAVMSEVCR------ 314 Query: 208 VEALGYETEVV----GKHGMWEMPGVP---VEAFSGRSQTIRE---------------AV 245 LG T GK + E+ GV ++ FS RS +IR A Sbjct: 315 --RLGVTTTARVPSPGKRPVMEIAGVDPDLIDTFSSRSASIRATTERLVEEYQRDHGRAP 372 Query: 246 GEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLT 305 + A L+TR K V + E G AA R L Sbjct: 373 DAKTLIAIAQQATLETRPQKDDVRSPQAIHEAAVARVGAG-------RAAGLVDAARALA 425 Query: 306 PGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAI 365 P +V + + + E + + A L A + + Sbjct: 426 PTNKEAASVEVDEITAHVLRTVEEHHAVWGAHVIEAEARRHLAALIPDQSVAEPLVQQVT 485 Query: 366 S------------------------REQLIPLDREKGLFTSGIHVLDELSVRALSRDIMK 401 I + K LFTS + E + +R Sbjct: 486 RAALGGSVTLTPPSPHGAFTPLTRSDGSSIYDHKGKTLFTSTRILDAEDQLLDAARTRTV 545 Query: 402 QNRVTVHPEKSV-----PRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMA 456 E++ P AG D A L + G G AG+ + Sbjct: 546 SPISRDTFERTAAQHTGPLDAGQRDLAREFATSDRELVVGIGPAG-AGKTTALRLAATAL 604 Query: 457 REQGREVQIIAADRRSQMNMKQDERLSGELITGRR------QLLEGMAFTPGSTVIVDQG 510 + GR + +A + + + + I G +L G ++VD+ Sbjct: 605 EDGGRRMIGLAPSAPAASVIAEAVGIEATTIHGFLTAHAQAELPAKYEVRAGDVLVVDEA 664 Query: 511 EKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSALMA--MKDAGVNTYRWQGGEQRPA 568 + L A + V + ++ A A + D V + R + + Sbjct: 665 GMAGTQRLAALHTIAREYGAHVRLIGDDRQLSAVEAGGALRLIDREVGSVRLEHVHRFQD 724 Query: 569 TIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPE 628 +E ++R GD A +A + + + +T A+ + +T +GL Sbjct: 725 ADEAEASLHLRDPLRPGDPFAWYQANDRVI-----GGDVDRMTDAVFAGWQTDTDVGLRS 779 Query: 629 VTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQG 688 + + + +R G V + + R Sbjct: 780 LMLAPTGATVTELNARAQAHRIAAGTVTGTRSVKLR------------------------ 815 Query: 689 ETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVV 748 S + + E L RV GD QV + D V Sbjct: 816 -----------DDLSAHVGDVIATRRNESLLRIQNGRD-RVKNGDLWQVTRIGADGSLDV 863 Query: 749 VPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARS 808 V + ++L + ++ + M GL R Sbjct: 864 VHRDHAAPVTLPAGYVREHVELGYARTISRSQGLTADTSHVLGDESMT-RETAYTGLTRG 922 Query: 809 GRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAI 868 + RLY A+ A + ++ + A + L T Q Sbjct: 923 KQSNRLY-----LEVADGAAVGDALEQIATRSDAMLSAHETIRAEQDRVDDLVTLIDQHA 977 Query: 869 HLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGT 928 +A E + + V L T + + + + G + Y Sbjct: 978 DVAERAGEIRYGRIAEVALGTRLATTLQSQESWGAVAAALRHAEDYGFSPVETLRVAYEQ 1037 Query: 929 GLL 931 L Sbjct: 1038 REL 1040 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 78/569 (13%), Positives = 149/569 (26%), Gaps = 30/569 (5%) Query: 769 KLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLA 828 L + + + + + + L + L + + A Sbjct: 341 DLIDTFSSRSASIRATTERLVEEYQRDHGRAPDAKTLIAIAQQATLETRPQKDDVRSPQA 400 Query: 829 RHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLL 888 H + + + K A + L VE + + Sbjct: 401 IHEAAVARVGAGRAAGLVDAARALAPTNKEAASVEVDEITAHVLRTVEEHHAVWGAHVIE 460 Query: 889 TEAKSFAAEGTGFTELGGEINAQIKRGDL---------------------LYVDVAKGYG 927 EA+ A + + Q+ R L + G Sbjct: 461 AEARRHLAALIPDQSVAEPLVQQVTRAALGGSVTLTPPSPHGAFTPLTRSDGSSIYDHKG 520 Query: 928 TGLLVSRASYEAEKSILRHILEGKEA--VMPLMERVPGELMEKLTSGQRAATRMILETSD 985 L S +AE +L + ER + L +GQR R + Sbjct: 521 KTLFTSTRILDAEDQLLDAARTRTVSPISRDTFERTAAQHTGPLDAGQRDLAREFATSDR 580 Query: 986 RFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA-GVDAQTLA 1044 V G AG GKTT R +A+ E R++GL P+ A + A G++A T+ Sbjct: 581 ELVVGIGPAGAGKTTALRLAATAL----EDGGRRMIGLAPSAPAASVIAEAVGIEATTIH 636 Query: 1045 SFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQ 1104 FL + + + + ++DE+ M G +A + + G GD QL Sbjct: 637 GFLTAHAQAELPAKYEVRAGDVLVVDEAGMAGTQRLAALHTIAREYGAHVRLIGDDRQLS 696 Query: 1105 AIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVP 1164 A+ G RL ++ + R + + +V Sbjct: 697 AVEAGGALRLIDREVG--SVRLEHVHRFQDADEAEASLHLRDPLRPGDPFAWYQANDRVI 754 Query: 1165 RQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAR 1224 + + + + L + + TG Sbjct: 755 GGDVDRMTDAVFAGWQTDTDVGLRSLMLAPTGATVTELNARAQAHRIAAGTVTGTRSVKL 814 Query: 1225 EQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHR 1284 L + N + ++ + + A+ + R Sbjct: 815 RDDLSAHVGDVIATRRNESLLRIQNGRDRVKNGDLWQVTRIGADGSLDVVHRDHAAPVTL 874 Query: 1285 DALVLVDNVYHRIAGISKDDGLITLQDAE 1313 A + ++V A +T + Sbjct: 875 PAGYVREHVELGYARTISRSQGLTADTSH 903 Score = 79.3 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 54/414 (13%), Positives = 109/414 (26%), Gaps = 19/414 (4%) Query: 1333 TPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAV-SGDSVTLSDGQQTREIRPGQEQAE 1391 + + + +W VT + + S+ + + Sbjct: 821 HVGDVIATRRNESLLRIQNGRDRVKNGDLWQVTRIGADGSLDVVHRDHAAPVTLPAGYVR 880 Query: 1392 QHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNR- 1450 +H++L YA T +QG + + L E+AY L+R KQ ++Y + Sbjct: 881 EHVELGYARTISRSQGLTADTSHVLGDESM------TRETAYTGLTRGKQSNRLYLEVAD 934 Query: 1451 -----QGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAG 1505 + +AH+ + DR + ++ + A R A Sbjct: 935 GAAVGDALEQIATRSDAMLSAHETIRAEQDRVDDLVTLI-DQHADVAERAGEIRYGRIAE 993 Query: 1506 LAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGEGRVKG 1565 +A G A + + AL + G S L G Sbjct: 994 VALGTRLATTLQSQESWGAVAAALRHAEDYGFSPVETLRVAYEQRELGTADDVPAVLSWR 1053 Query: 1566 SGDAQFVALQGSRNGESLLADNMQDG-VRIARDNPDSGVVVRIAGEGRPWNPGAITGGRV 1624 A R+ L + + AR + V + R + Sbjct: 1054 IERALEKIDAPRRSVMDLPDVDGVAAWIADARLQENDLV----PADWREHLQERHHYIGI 1109 Query: 1625 WGDIPDNSVQPGAGNGEPVTAEVLAQRQAEEAIRRETERRADEIVRKMAENKPDLPDGKT 1684 ++ V + + A + + + + T Sbjct: 1110 RLKERGAALAAERPAWSDALGAVPSHPKRMIAWHQLAAEVDVLRAKYRIDPAEAMAIPAT 1169 Query: 1685 EQAVREIAGQERDRAAITEREAALPEGVLREPQRVREAVREIARENLLQERLQQ 1738 + ++ A+ + L + R R A AR ++ L + Sbjct: 1170 LRGNEIADRLQQRVTAMHKASLLLTAEPIALDIRQRYAAHFTARVGAVRATLGR 1223 Score = 52.7 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 15/80 (18%) Query: 1 MMSIAQVRSAGSAGNYYTDK-------------DNYYVLGSMGERWAGRGAEQLGLQGSV 47 MM++ V SAG YYT + D Y V G+ RW GRGA+ LG+ G+V Sbjct: 8 MMTMH-VLSAGDGYTYYTSEVATGDAKRDRELGDYYTVDGNPPGRWMGRGADVLGVSGTV 66 Query: 48 DKDVFTRLL-EGRLPDGADL 66 ++ L EG PD + Sbjct: 67 TEEQMKALYGEGLHPDADRI 86 >UniRef50_D2Q9V3 TrwC relaxase n=2 Tax=Bifidobacterium dentium RepID=D2Q9V3_9BIFI Length = 1394 Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats. Identities = 141/1020 (13%), Positives = 285/1020 (27%), Gaps = 198/1020 (19%) Query: 22 NYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLL-----EGRLPDGAD-----LSRMQD 71 Y G+ RW G GA+ LG GSV + ++ + + R P D Sbjct: 34 YYTAKGNPPGRWIGSGAKLLG--GSVGRTASSKTVRSLINDSRDPSTGRFLGDVKLTKGD 91 Query: 72 GSNRHRPGYDLTFSAPKSVSMMAMLGGDKR---LIDAHNQAVDFAVRQVEALASTRVMTD 128 G+D T PKSVS++ G + + + +A D + +E ++ Sbjct: 92 DGEPPVAGWDYTTRQPKSVSILWAFGDAETRRGIDECLQKATDMTIAYLEDEYASTRAGQ 151 Query: 129 GQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH--NGEWKTLSSDKVGKTGFI 186 G +V + +F+H +RD +PQ H H ++N + +G W L Sbjct: 152 GGVASVACDGVAGFVFDHFDTRDGDPQPHKHITISNRVRRSSDGVWTALDG--------- 202 Query: 187 ENVYANQIAFGRLYREKLKEQV-EALGYET-----EVVGKHGMWEMPGVP---VEAFSGR 237 +Y++ + ++ L++ + + G+ E K + E+ GVP +EAFSGR Sbjct: 203 RKLYSSMVEISEIHENLLQDLLTQRFGWTWTTKVNEQGTKSVINEVDGVPAELIEAFSGR 262 Query: 238 SQTIREAVGEDASLKSRD---------------VAALDTRKSKQHVDP--EIKMAEWMQT 280 I + V + + TRK+K + P K W + Sbjct: 263 HSEIAKQVEQRVQQEEAQTGRPVSFQRRAQIDLEVWQATRKAKPEIQPSLAEKQRHWWKK 322 Query: 281 LKETGFDIRA---------------------YRDAADQRADLRTLTPGPASQDGPDVQQA 319 L +T DI D + D ++ Sbjct: 323 LGQTAPDIDIRHVWDTVNSRKTSMLHIDSTCQEDISRLLLDQIADMSRTGRNGLQLEREL 382 Query: 320 VTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIER--------ARAGIDEAIS----- 366 V + +S+ + + T+V A +L E+ A + + Sbjct: 383 VDLSYRNVSKGRTTWKKTNVRAEAERLLRSVRIDPEQRIIVANRIADLALARCVKLTPGR 442 Query: 367 ----------------REQLIPLDREKGLFTSGIHVLDELSVRAL-------------SR 397 + D + L+TS + E + +R Sbjct: 443 YRIPQDVKDSPTLTNGNGVSVFDDDKLDLYTSREILDAEHYMIEQAGKPAVTGFTADEAR 502 Query: 398 DIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAR 457 ++ P A +A + + V G G G+ + + R Sbjct: 503 IWLQGWNEHAGRNGGYPLAADQFEAAVYALSNPRMVGAVIGPAG-TGKTTTMRAVADAWR 561 Query: 458 EQ--GREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMA----------------- 498 + V +A RR+ ++ + I + Sbjct: 562 AKYGPDSVLGLATSRRAVGELRNSIGCNSITIAKLLYHNDIDQIERHRRDIAVLDQQIRS 621 Query: 499 -------------------------FTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVL 533 P VI+D+ + + + A +V Sbjct: 622 TPDPVQRLACRMRLSRILAEESTYSIRPNQLVIIDEAGMVDTRHMAQVSRMAELMGAKVT 681 Query: 534 ITDSGQRT----GTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAA 589 +T + G G L M+ G+ R+ A + Sbjct: 682 LTGDPLQLDSVSGAGGMLGWMERHGM---------------YQMLSSLWRFTSKADKWDG 726 Query: 590 SVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTM--TALSPVWLDSRSRYLR 647 G +S+ + G + EL+ G PE L ++D + Sbjct: 727 DPHGGRDSIRRWEGEGRATL-------ELRKGGDRADPESVAACERLVQRYVDHDRLHWG 779 Query: 648 DMY--RPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLF 705 + ++ + + +I Q + R + S D + ++ Sbjct: 780 EDVQLEEESYVQCIEWQDQGKSTLLIAGTRDQVRDINRRFILERRSKGQ-SEADPAKTVA 838 Query: 706 RPEKMPVADGERLRVTGKIPGLR-----VSGGDRLQVASVSEDAMTVVVPGRAEPATLPV 760 + + V G+++ + + G ++ +V ++ V +P Sbjct: 839 LRDGLDVGRGDQIVCRKNEDDITSDGKSMENGMTFRIENVGRRDVSCVSLVDGSRWEIPR 898 Query: 761 SDSPFTALKLENGWVETPGHSVS-DSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLD 819 + ++ D V N +R + Y + Sbjct: 899 EFLETGC-EAGYACTVHRCQGMTVDRCAVLFPSDANTPCNLQYVAGSRGKEENHFYYACP 957 Query: 820 ETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKK 879 + + + + I + L + ++ + L + + Sbjct: 958 DEEQRKVRHQLSGVETDPKAIAMSRMKAGLLNHPDAATATETLERERTDRMDLKRLMREH 1017 Score = 267 bits (681), Expect = 3e-69, Method: Composition-based stats. Identities = 169/1204 (14%), Positives = 313/1204 (25%), Gaps = 210/1204 (17%) Query: 659 WNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERL 718 + + + H I +S G + + + + G Sbjct: 173 RDGDPQPHKHITISNRVRRSSDGVWTALDGRKLYSSMVEISEIHENLLQDLLTQRFGWTW 232 Query: 719 RVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETP 778 G + + V ++ + + + Sbjct: 233 TTKVNEQ------GTKSVINEVDGVPAELIEAFSGRHSEIAKQVEQRVQQEEAQ---TGR 283 Query: 779 GHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSL----DETRTAEKLARHPSFT 834 S A + V Q + + + + L + S Sbjct: 284 PVSFQRRAQIDLEVWQATRKAKPEIQPSLAEKQRHWWKKLGQTAPDIDIRHVWDTVNSRK 343 Query: 835 VVSEQIKTRAGETSLETAISHQKSALH------TPAQQAIHLALPVVESKKLAFSMVDLL 888 I + E + ++ + L+ V + + ++ Sbjct: 344 TSMLHIDSTCQEDISRLLLDQIADMSRTGRNGLQLERELVDLSYRNVSKGRTTWKKTNVR 403 Query: 889 TEAKSFAAEGTGFTELGGEINAQIKRGDLLY--------------------------VDV 922 EA+ E + +I L V V Sbjct: 404 AEAERLLRSVRIDPEQRIIVANRIADLALARCVKLTPGRYRIPQDVKDSPTLTNGNGVSV 463 Query: 923 AKGYGTGLLVSRASYEAEKSILRHI----------LEGKEAVMPLMERVPGELMEKLTSG 972 L SR +AE ++ E + + E L + Sbjct: 464 FDDDKLDLYTSREILDAEHYMIEQAGKPAVTGFTADEARIWLQGWNEHAGRNGGYPLAAD 523 Query: 973 QRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGE 1032 Q A L V G AG GKTT RAV A + V+GL + RAVGE Sbjct: 524 QFEAAVYALSNPRMVGAVIGPAGTGKTTTMRAVADAWR--AKYGPDSVLGLATSRRAVGE 581 Query: 1033 MRSA-GVDAQTLASFLHDTQLQQRSGETPD------------------------------ 1061 +R++ G ++ T+A L+ + Q D Sbjct: 582 LRNSIGCNSITIAKLLYHNDIDQIERHRRDIAVLDQQIRSTPDPVQRLACRMRLSRILAE 641 Query: 1062 ------FSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAI-APGQPFRL 1114 N L ++DE+ MV MA+ + G + +GD QL ++ G Sbjct: 642 ESTYSIRPNQLVIIDEAGMVDTRHMAQVSRMAELMGAKVTLTGDPLQLDSVSGAGGMLGW 701 Query: 1115 QQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEH 1174 + ++ + R T + + D + + E + Sbjct: 702 MERHGM--YQMLSSLWRFTSK-----ADKWDGDPHGGRDSIRRWEGEGRATLELRKGGDR 754 Query: 1175 SVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLN 1234 + E + E + L + Y + + + TL++ Sbjct: 755 ADPESVAACERLVQRYVDHDRLHWGEDVQLEEESYVQCIE-----WQDQGKSTLLIAGTR 809 Query: 1235 EDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVY 1294 + R +N R G+ + + LR + + Sbjct: 810 DQVRDINRRFILERRSKGQSEADP----------AKTVALRDGLDVGRGDQIVCRKNEDD 859 Query: 1295 HRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRER 1354 G S ++G+ + G + + + G R + E Sbjct: 860 ITSDGKSMENGMTFRIENVGRRDVSC----------------VSLVDGSRWEIPREFLET 903 Query: 1355 GYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAI 1414 G A TV H QG + Sbjct: 904 GCEAGYACTV--------------------------------------HRCQGMTVDRCA 925 Query: 1415 ALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNA------VQKGTAHD 1468 L ++ N YVA SR K+ Y + + K A Sbjct: 926 VLFPSDANTPC----NLQYVAGSRGKEENHFYYACPDEEQRKVRHQLSGVETDPKAIAMS 981 Query: 1469 VFEPKPDREVMNAERLFSTAREL-RDVAAGRAVLRQA---GLAGGDSPARFIAPG--RKY 1522 + A + RE + R + GL G +A K Sbjct: 982 RMKAGLLNHPDAATATETLERERTDRMDLKRLMREHDYAAGLISGPHLNAMLARRHDPKT 1041 Query: 1523 PQPYVALPAFDRNGKSAGIWLNPLTTDD-------GNGLRGFSGEGRVKGSGDAQFVALQ 1575 P+++ G+W TD G L +GR ++ Sbjct: 1042 VDKITRSPSYEW---LRGVWSRAYMTDAKRALAIIGQPLDPDRLKGRRPDRDQLVGKIVR 1098 Query: 1576 GSR--NGESLLADNMQDGVRIARDNPDSGVVVRIAGEG--RPWNPGAITGGRVWGDIPDN 1631 +R + + + + + ++RD+ + V I A+ G + D+ + Sbjct: 1099 TARVLHPDRMDDTTYRIDMDVSRDSEQARYVTEILERSDIPYALSDALDGKAITIDVDRS 1158 Query: 1632 SVQPGAGNGEPVTAEVLAQRQAE----EAIRRETERRADEIVRKMAENKPDLPDGKTEQA 1687 + + + V Q+ +RRE R E +++P PD A Sbjct: 1159 CIPAVKTILDGLCQTVKGFDQSLFPRWRELRREEGRIFKENPDMRRQSRPVEPDWAATIA 1218 Query: 1688 VREIAG-QERDRAAITEREAA--LPEGVLREPQRVREAVREIARENLLQERLQQMERDMV 1744 R AG +R A+ E A +P + VR+ E L++ ++ ++ RD Sbjct: 1219 GRLNAGLLDRVNGAVHEEWCAGVIPRIRASRHGSELDIVRQ--NERLIELKVGELVRDAQ 1276 Query: 1745 RDLQ 1748 Q Sbjct: 1277 ASNQ 1280 >UniRef50_C7CNC3 Putative uncharacterized protein n=1 Tax=Methylobacterium extorquens DM4 RepID=C7CNC3_METED Length = 1117 Score = 290 bits (742), Expect = 3e-76, Method: Composition-based stats. Identities = 167/839 (19%), Positives = 289/839 (34%), Gaps = 103/839 (12%) Query: 14 GNYYTDKDN------YYVLGSMGERWAGRGAEQLGL---QGSVDKDVFTRLLEGRLPDGA 64 YYTD ++ GS E GR + L G VD V L GR P+ Sbjct: 82 VAYYTDNGAGEANGVWWTRGSGSEVGPGRFGDPFRLCPDGGDVDGRVLRDLAAGRDPESL 141 Query: 65 DLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDK---RLIDAHNQAVDFAVRQVEALA 121 + + GYDL F+APKSVS++A G + R++ AH++AV A+ A Sbjct: 142 EPLVRASANGGRSVGYDLQFAAPKSVSVLAAFAGPEERARILAAHDRAVHRALDYA--HA 199 Query: 122 S---TRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANV-TQHNGEWKTLSS 177 + + A++ H TSR Q+PQLH+HAV+ N+ + +G L + Sbjct: 200 AGLIVTRTGAQGRHHAPAAGVSAAVYRHFTSRAQDPQLHSHAVLLNLCVRADGSTGGLDN 259 Query: 178 DKVGKTGFIENVYANQIAFGRLYREKLKEQVEA-LGYETEVVGKHGMWEMPGVPV---EA 233 + N LYR +L + + LGYE G++ +E+ GV E Sbjct: 260 ---------RAILKNAGGIAALYRSELASGLRSGLGYEAVRAGRN--FEIAGVAEPVLEL 308 Query: 234 FSGRSQTIREAVGEDASLKSRD-----VAALDTRKSK-QHVDPEIKMAEWMQTLKETGFD 287 FS R I E S+D AA DTR K + + AEW + L + G+ Sbjct: 309 FSKRRAAIERVARERGFETSKDRAAAQAAAFDTRARKNREMPLAALEAEWERQLVQAGWA 368 Query: 288 IRAYRDAADQRAD-LRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGI 346 A + AD +R GPA++ + +A + G + D++ R Sbjct: 369 RGAVFEGVRIAADGIREARVGPAAERRQRLAEA---GLTGALAMQAVVEERDLVRRVAEA 425 Query: 347 LPPENGVIERARAGIDEAISREQLIPLDRE---KGLFTSGIHVLDELSVRALSRDIMKQN 403 L E G + ++ ++ + R + ++ + + E + + + Sbjct: 426 LQCEAG-ADAVLDEVERLCRDGGVVAVGRTAEGEAVYATPEMIEAERGMLRRAYGRQDER 484 Query: 404 RVTVHP------EKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAR 457 + A AV +R ++++ G G +G+ +A + R Sbjct: 485 AFVPEAVVRRVLLERPSLRAEQRAAVRHAL-NRDGVSVIEGSAG-SGKSYAMASVAEAVR 542 Query: 458 EQGREVQIIAADRRSQMNMKQDERLS---GELITGRRQLLEGMAFT--PGSTVIVDQGEK 512 G EV +IA ++ ++ D + +TG ++ T P +TVI D+ Sbjct: 543 ACGGEVWVIAPSWKAVDVIRTDTATAEAMARAVTGFLGRIDKGEITLGPETTVIADEAGM 602 Query: 513 LSLKETLTLLDGAARHNVQVLITDSGQRTG---TGSALMAMKD----------------- 552 + ++ L++ +++++ ++ G+ + + Sbjct: 603 IGTRDLAALVEATGAAGAKLVLSGDTRQLAPVVAGAPMRLLVRALGAARMDEIQRQRGRS 662 Query: 553 --------------AGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVK----AG 594 A T R R I DR L +A S + A Sbjct: 663 ESEGAWMRAASIDFAAGRTARALEAYDRGGAITWGGDREATIQALVDAYAVSRRDPEGAE 722 Query: 595 EESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRS---RYLRDMYR 651 ++ L IR LK G+L A P + D Sbjct: 723 RTRAVLTGWNKDVRALNARIRDRLKQDGLLPEGADVEIAAIPRGGSQAEPVSLTVGDEVM 782 Query: 652 PGMVMEQWNPETRSHDRYVIDRV--TAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEK 709 G +E R+ D I+ + LTLR A+ ++ +S + + Sbjct: 783 FGESVEVEGQMIRNADLARIEALSGDPDDPMLTLRLAKSGARLSVRASALVGFREPGEPR 842 Query: 710 MPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTAL 768 +P T G+ V + +A V + + L V Sbjct: 843 VPRLQHSYAMTTHASQGVTVDEAFVADLRGTGAEATYVAMTRHRRSSRLFVDTDRIRER 901 Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 134/781 (17%), Positives = 230/781 (29%), Gaps = 102/781 (13%) Query: 879 KLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYE 938 + DL+ G + E+ + G ++ V G + + E Sbjct: 410 QAVVEERDLVRRVAEALQCEAGADAVLDEVERLCRDGGVVAV-GRTAEGEAVYATPEMIE 468 Query: 939 AEKSILRHILEGKEAVMPLMERVPGELMEK---LTSGQRAATRMILETSDRFTVVQGYAG 995 AE+ +LR ++ + E V ++ + L + QRAA R L D +V++G AG Sbjct: 469 AERGMLRRAYGRQDERAFVPEAVVRRVLLERPSLRAEQRAAVRHALN-RDGVSVIEGSAG 527 Query: 996 VGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVDAQTLASFLHDTQLQQR 1055 GK+ +V AV V + P+ +AV +R+ A+ +A + + Sbjct: 528 SGKSYAMASVAEAVRAC----GGEVWVIAPSWKAVDVIRTDTATAEAMARAVTGFLGRID 583 Query: 1056 SGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQ 1115 GE T + DE+ M+G D+A A G + V SGDT QL + G P RL Sbjct: 584 KGEITLGPETTVIADEAGMIGTRDLAALVEATGAAGAKLVLSGDTRQLAPVVAGAPMRLL 643 Query: 1116 QTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHS 1175 A A M EI RQ EGAW S Sbjct: 644 VRALGA--ARMDEIQRQRGRSES----------------------------EGAWMRAAS 673 Query: 1176 VTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNE 1235 + + L + + + + A ++T N+ Sbjct: 674 IDFAAGRTARALEAYDRGGAITWGGDREATIQALVDAYAVSRRDPEGAERTRAVLTGWNK 733 Query: 1236 DRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYH 1295 D R LN+ I D ++ G L + + E Sbjct: 734 DVRALNARIRDRLKQDGLLPEGADVEIAAIPRGGSQAE---------------------- 771 Query: 1296 RIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERG 1355 + + + D R + Sbjct: 772 ---------------------PVSLTVGDEVMFGESVEVEGQMIRNADLARIEALSGDPD 810 Query: 1356 YVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIA 1415 ++ + + SV S RE E + +YA+T H +QG + A Sbjct: 811 DPMLTLRLAKSGARLSVRASALVGFRE---PGEPRVPRLQHSYAMTTHASQGVTVDEAFV 867 Query: 1416 LEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDN---RQGWTDAINNAVQKGTAHDVFEP 1472 G E+ YVA++R ++ +++ D R+ A + + Sbjct: 868 ------ADLRGTGAEATYVAMTRHRRSSRLFVDTDRIRERLEAARSGIRPEERGLTSGRG 921 Query: 1473 KPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPARFIAPGRKYPQPYVALPAF 1532 E+ L + A+ A AG D AP R Y P P Sbjct: 922 AARAELTPLGHSEIRQAYLAESASSGGKTNIADFAGSDLRGWCGAPVRSYDVPVP--PGG 979 Query: 1533 DRNGKSAGIWLNPLTT-----DDGNGLRGFSGEGRVKGSGDAQF-VALQGSRNGESLLAD 1586 + G W + D L + R+ A + E ++ Sbjct: 980 RMGLRHEGAWREAIAGIAPLPDREPSLVAQALRQRIGERLRAPAYYPIPRPNGSERAISR 1039 Query: 1587 NMQDGVRIARDNPDSGVVVRIAGEGRPWNPGAITGGRVWGDIPDNSVQPGAGNGEPVTAE 1646 + R + ++ + + GD +++ P+ Sbjct: 1040 ALDALRWRDRFRRLTAILGQGLRRQAQGIAATLQVALPRGDSAKDAMNVSQARMPPIDEP 1099 Query: 1647 V 1647 V Sbjct: 1100 V 1100 >UniRef50_C7NLP0 TrwC relaxase n=9 Tax=Actinomycetales RepID=C7NLP0_KYTSD Length = 1184 Score = 289 bits (739), Expect = 7e-76, Method: Composition-based stats. Identities = 181/1171 (15%), Positives = 315/1171 (26%), Gaps = 193/1171 (16%) Query: 22 NYYVLGSMGERWAGRGAEQLG-----LQGSVDKDVFTRLLE-GRLPDGADLSRM------ 69 Y G+ +W G G LG + V + L+ GR P D Sbjct: 38 YYLEAGTPRGQWLGSGVASLGKGQLAVGNRVSEAQLQLLMGMGRDPITGDPLGHAFPAYR 97 Query: 70 ----------------------------------QDGSNRHRPGYDLTFSAPKSVSMMAM 95 + G R G+D TFS PKS S + Sbjct: 98 SVSEKIEARIVDLDPDLSPGVKGEAVARIEAEESERGRRRAVAGFDFTFSVPKSASALWA 157 Query: 96 LGGDKR---LIDAHNQAVDFAVRQVEALASTRVMT----DGQSETVLTGNLVMALFNHDT 148 + + +AH+ AV V +E + DG V V F+H Sbjct: 158 VADAGTQALIGEAHHAAVAEVVAFMEREVAATRTGATAGDGAVAQVDVTGFVATAFDHFD 217 Query: 149 SRDQEPQLHTHAVVANVTQH--NGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKE 206 SR +P LHTH V++N Q +G+W++L + A +A L+ + Sbjct: 218 SRAGDPHLHTHVVISNKVQTAFDGKWRSLDGRPMH---------AAVVALSELHEAVFAD 268 Query: 207 QVEA-LGYETEV----VGKHGMWEMPGVPVE---AFSGRSQTIR--------EAVGEDAS 250 + G E E ++ W + VP E FS R++ I E V Sbjct: 269 HMTRTFGVEWEARDMGRDRNPAWAISTVPEELVQEFSTRARHIDAEKNRLIAEYVARHGR 328 Query: 251 L-------KSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADL-R 302 K R A L TR K ++W + TG + A D + Sbjct: 329 QPSTATIIKLRAQATLATRPEKAVRSLADLTSDWRT--RATGVLGQDATGWARTITDNDQ 386 Query: 303 TLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPP------------- 349 L + + + + E++ + +++A Sbjct: 387 PLLLRADDVPLDAIGELGQTVVEVVGEKRSTWRRWNLMAEASRQTMGWRFATMHDREAVV 446 Query: 350 ------------ENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSR 397 + A + + + +F+S + + E + SR Sbjct: 447 AMVADAAEQASLRLTPPDLATSPATFRRGDGTSVFRPKHSTVFSSELLLAAEERLLDRSR 506 Query: 398 DIMKQNRVT--------VHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERV 449 + + +D + +A L ++ G G AG+ + Sbjct: 507 TLTAPTVPVTTVEKITNKPDHEGRMLGEDQTDVLMKIAVSGRMLDVLVGPAG-AGKTTAM 565 Query: 450 AELVMMA--REQGREVQIIAADRRSQMNMKQDERLSGELITGR--RQLLEGMAFTPGSTV 505 + L V +A + + D + E L++G F G V Sbjct: 566 SALRRAWEKEHGSGSVVGLAPSAVAAQVLADDLGIRCENTAKWWQNHLIDGTDFEAGQLV 625 Query: 506 IVDQGEKLSLKETLTLLDGAARHNVQVLITDSG---QRTGTGSALMAM-----KDAGVNT 557 I+D+ + A R +VL+ Q G A + + + Sbjct: 626 IIDEASLAGTLSLDRITHLAERAGAKVLLVGDYGQLQSVDAGGAFGLLVGDRNEAPELVD 685 Query: 558 YRWQGGEQ-----------RPATIISEPDRNVRYARLAG--------DFAASVKAGEESV 598 E R I + D + + A + G SV Sbjct: 686 VHRFTHEWEKTASLALRHGRTQVIDTYLDHDRIHEGEAEAMTDAAYTAWRTDRDRGLVSV 745 Query: 599 AQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQ 658 + + L Q R++L G L + + R R + Sbjct: 746 LVAETRDDVSALNQRARADLILDGTLTPGQEVELTDGTTAGIGDTIITRRNDRR---LRN 802 Query: 659 WNPETRSHDRYVIDRVTAQSHSLTLRDAQ--GETQVVRISSLDSSWSLFRPEKMPVADG- 715 R+ D + I V + + G T V+ + + L A G Sbjct: 803 GKDWVRNGDTWTITGVRDDGSVTIRKTGRRFGGTIVLPTTYVADHVDLGYAITAHRAQGV 862 Query: 716 --ERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENG 773 + V + R + + S A ++ P + TA + G Sbjct: 863 TVDTAHVLVEPTTTRENFYVAMTRGKHSNRAYVILDRADEHAYPHPGDNPDATAHSVLYG 922 Query: 774 WVETPGHSVSDSATVFA------SVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKL 827 ++ G +S T+ A S+ Q+A + T+ A+ R L + T Sbjct: 923 VLQHVGAELSAHETITAEQERWGSIAQLAAEYETIAAAAQHDRWAILIRNAGLTAEQADA 982 Query: 828 ARHPSFTVVSEQIKTRAGETSLETA------ISHQKSALHTPAQQAIHLALPVVESKKLA 881 RA + ++ + A +H + ++ Sbjct: 983 TIESEAFGALTAELRRAEANHHDLDTLLPRLVTARGFADADDIASVLHYRVARATARPAG 1042 Query: 882 FSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYE--- 938 + A +R +L+ T A Sbjct: 1043 SGRTHKAPRLIAGLIPSADGPMTDDMRQALDERRELIEARADAVLDTARDAGEAWTRPLG 1102 Query: 939 ---AEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAG 995 + V +R L A + I R Sbjct: 1103 DPPRDPRKTAAWRRHARTVAAYRDRYGITDDTPLGPAPENAAQKIDAARAR--------- 1153 Query: 996 VGKTTQFRAVMSAVNMLPESERPRVVGLGPT 1026 + RA A ++ER V PT Sbjct: 1154 ---SALVRARDIAQERPRDAERRPVEQAAPT 1181 Score = 135 bits (339), Expect = 2e-29, Method: Composition-based stats. Identities = 113/740 (15%), Positives = 189/740 (25%), Gaps = 101/740 (13%) Query: 953 AVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNML 1012 + + P L Q I + V+ G AG GKTT A+ A Sbjct: 516 TTVEKITNKPDHEGRMLGEDQTDVLMKIAVSGRMLDVLVGPAGAGKTTAMSALRRAWEK- 574 Query: 1013 PESERPRVVGLGPTHRAVGEMRSA-GVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDE 1071 E VVGL P+ A + G+ + A + + + E + L ++DE Sbjct: 575 -EHGSGSVVGLAPSAVAAQVLADDLGIRCENTAKWWQNHLIDGTDFE----AGQLVIIDE 629 Query: 1072 SSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVR 1131 +S+ G + R L G + + GD QLQ++ G F L + + ++ R Sbjct: 630 ASLAGTLSLDRITHLAERAGAKVLLVGDYGQLQSVDAGGAFGLLV-GDRNEAPELVDVHR 688 Query: 1132 QTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQ 1191 T E + + + + Sbjct: 689 FTHEWEKTASLALRHGRTQVIDTY------------------------------------ 712 Query: 1192 QKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKA 1251 L + + + +++V +D LN Sbjct: 713 ----LDHDRIHEGEAEAMTDAAYTAWRTDRDRGLVSVLVAETRDDVSALNQRARADLILD 768 Query: 1252 GELGKEQ---VMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLIT 1308 G L Q + R +D + + I G+ +DDG +T Sbjct: 769 GTLTPGQEVELTDGTTAGIGDTIITRRNDRRLRNGKD--WVRNGDTWTITGV-RDDGSVT 825 Query: 1309 LQDAEGNT------RLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVW 1362 ++ + V G + V + R ++ Sbjct: 826 IRKTGRRFGGTIVLPTTYVADHVDLGYAITAHRAQGVTVDTAHVLVEPTTTRENFYVAMT 885 Query: 1363 TVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGN 1422 + V L + PG TAH + + G E + Sbjct: 886 RGKHSNRAYVILDRADEHAYPHPGDNPDA---------TAH----SVLYGVLQHVGAELS 932 Query: 1423 RKLMAGFESAYVALSR--------MKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKP 1474 E R + W I NA D Sbjct: 933 AHETITAEQE-----RWGSIAQLAAEYETIAAAAQHDRWAILIRNAGLTAEQADATIESE 987 Query: 1475 DREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDR 1534 + AE + A ++ G A D A + A PA Sbjct: 988 AFGALTAELRRAEANHHDLDTLLPRLVTARGFADADDIASVLHYRVARA---TARPAGSG 1044 Query: 1535 NGKSAGIWLNPLTTDDGNGLRGFSGE---GRVKGSGDAQFVALQGSRNGESLLADNMQDG 1591 A + L + + R + L +R+ + D Sbjct: 1045 RTHKAPRLIAGLIPSADGPMTDDMRQALDERRELIEARADAVLDTARDAGEAWTRPLGDP 1104 Query: 1592 VRIARDNPDSGVVVRIAGEGRPWNPGA--ITGGRVWGDIPDNSVQ---PGAGNGEPVTAE 1646 R +P R IT G P+N+ Q V A Sbjct: 1105 PR----DPRKTAAWRRHARTVAAYRDRYGITDDTPLGPAPENAAQKIDAARARSALVRAR 1160 Query: 1647 VLAQRQAEEAIRRETERRAD 1666 +AQ + +A RR E+ A Sbjct: 1161 DIAQERPRDAERRPVEQAAP 1180 Score = 94.7 bits (233), Expect = 3e-17, Method: Composition-based stats. Identities = 87/645 (13%), Positives = 168/645 (26%), Gaps = 42/645 (6%) Query: 1108 PGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQE 1167 G+ + + A +R+ E S++ + + + Sbjct: 546 SGRMLDVLVGPAGAGKTTAMSALRRAWEKEHGSGSVVGLAPSAVAAQVLADDLGIRCENT 605 Query: 1168 GAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQT 1227 W H + Q + + + + + + + Sbjct: 606 AKWWQNHLI------DGTDFEAGQLVIIDEASLAGTLSLDRITHLAERAGAKVLLVGDYG 659 Query: 1228 LIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDAL 1287 + + L + + ++ + + +R G + + T+ H Sbjct: 660 QLQSVDAGGAFGLLVGDRNEAPELVDVHRFTHEWEKTASLALRHGRTQVIDTYLDHDRIH 719 Query: 1288 V----LVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVA----------EGVTLYT 1333 + + + +D GL+++ AE + + + G + Sbjct: 720 EGEAEAMTDAAYTAWRTDRDRGLVSVLVAETRDDVSALNQRARADLILDGTLTPGQEVEL 779 Query: 1334 PDTIRVGTGDRMRFTKSDRERG-----YVANSVWTVTAVSGDSVTLSDGQQTR---EIRP 1385 D G GD + ++DR WT+T V D R I Sbjct: 780 TDGTTAGIGDTIITRRNDRRLRNGKDWVRNGDTWTITGVRDDGSVTIRKTGRRFGGTIVL 839 Query: 1386 GQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQV 1445 H+DL YAITAH AQG + A L + E+ YVA++R K + Sbjct: 840 PTTYVADHVDLGYAITAHRAQGVTVDTAHVLV------EPTTTRENFYVAMTRGKHSNRA 893 Query: 1446 YTDNRQGWTDAINNAVQKG--TAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQ 1503 Y + A + TAH V + E + + + Sbjct: 894 YVILDRADEHAYPHPGDNPDATAHSVLYGVLQHVGAELSAHETITAEQERWGSIAQLAAE 953 Query: 1504 AGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGEGRV 1563 + A + ++ G L + N + R+ Sbjct: 954 YETIAAAAQHDRWAILIRNAGLTAEQADATIESEAFGALTAELRRAEANHHDLDTLLPRL 1013 Query: 1564 KGSGDAQFVALQGS---RNGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPGAIT 1620 + S A G +G++ G A+ Sbjct: 1014 VTARGFADADDIASVLHYRVARATARPAGSGRTHKAPRLIAGLIPSADGPMTDDMRQALD 1073 Query: 1621 GGRVWGDIPDNSV-QPGAGNGEPVTAEV-LAQRQAEEAIRRETERRADEIVRKMAENKPD 1678 R + ++V GE T + R + R R D Sbjct: 1074 ERRELIEARADAVLDTARDAGEAWTRPLGDPPRDPRKTAAWRRHARTVAAYRDRYGITDD 1133 Query: 1679 LPDGKTEQAVREIAGQERDRAAITEREAALPEGVLREPQRVREAV 1723 P G + + R R+A+ E R+ +R Sbjct: 1134 TPLGPAPENAAQKIDAARARSALVRARDIAQE-RPRDAERRPVEQ 1177 >UniRef50_UPI0001AF46AC exonuclease V subunit alpha n=1 Tax=Mycobacterium kansasii ATCC 12478 RepID=UPI0001AF46AC Length = 1941 Score = 288 bits (735), Expect = 2e-75, Method: Composition-based stats. Identities = 155/966 (16%), Positives = 281/966 (29%), Gaps = 157/966 (16%) Query: 40 QLGLQGSVDKDVFTRLLEGRLPDGADLSRM----QDGSNRHRPGYDLTFSAPKSVSMMAM 95 + ++ ++ +++FT D +LS + GYDLTF+ KSVS + Sbjct: 160 KARIRTALAREMFTETYSRPPADERELSGFIASNSRAATTAVAGYDLTFTPVKSVSALWA 219 Query: 96 LGG---DKRLIDAHNQAVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQ 152 + + + + H QAV + +E A+ M V + L++A F+H SR Sbjct: 220 IAPTPIAQGIEECHRQAVAETLEFLEDQAAFARMGAHGVAQVNSTGLIVAAFDHRDSRAG 279 Query: 153 EPQLHTHAVVANVTQHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQV-EAL 211 +P LHTHA V+N Q G ++ +A Y +++ + L Sbjct: 280 DPNLHTHAAVSNKVQVIGP----DGVPRWLALDGTPLHHATVAASEFYNTRIEALLIAKL 335 Query: 212 GYETEV----VGKHGMWEMPGVP---VEAFSGRSQTIREAVGEDASL------------- 251 G GK + E+ G+ +E FS RS I VGE A Sbjct: 336 GVRFAETPAKRGKRPVREIVGMATALIEKFSSRSAAIDHRVGELAKQFQVDHGREPTVVE 395 Query: 252 --KSRDVAALDTRKS-KQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGP 308 A L+TR++ + + W E RA + Sbjct: 396 MLALSQRATLETRQAKHEPRSLGEQRHVWRVQAVEVLGSQRALTAMVADVTNQAVSQR-- 453 Query: 309 ASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGV--IERARAGIDEAI- 365 V + IA +SE + +T V A L N E + A+ Sbjct: 454 VEITDKWVHEHAAAIIATVSESRATWTINHVRAEAQRELRYANHPGGPELVNRLVASALS 513 Query: 366 ----------------------SREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQ- 402 + + +++S + E + A + + Sbjct: 514 EHSVALTTDADAEKNEPAALRRRDGSSVYTRHDTTVYSSADILSAERRILAAAGLRDGRT 573 Query: 403 --------NRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVM 454 + + V AG V +A + + G G+ +A L Sbjct: 574 VDDTSIGLALLEYQANQDVELNAGQVALVREMASSGARVQLALAPAG-TGKTTAMAALAG 632 Query: 455 MAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGM----------------A 498 R G V +A + + D + I QL E A Sbjct: 633 AWRNAGGNVIGLAPTAGAAEVLNTDLNAPTDTIAKLVQLTETRAGEPAPADDPARKWFTA 692 Query: 499 FTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMKDAGVNTY 558 + +I+D+ S + ++ A V + Q+ + SA ++D Sbjct: 693 IDSDTLLIIDEAGMASTLDLDIVIAHALARGASVRLIGDDQQLASISAGGILRD------ 746 Query: 559 RWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSEL 618 LA + + + +A + AIR+ Sbjct: 747 ------------------------LADRYETVTLSTVVRFTHPETGQAEAAASLAIRAGD 782 Query: 619 KTQ-GVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQ 677 G D R G + + ++ + + Sbjct: 783 PAGIGFYIDHHRVHVGADATAADMAYRAWSADIAAG-----RDSILLAPTNELVAELNER 837 Query: 678 SHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLR-------VS 730 + L + +S + ++ + + + G+ + LR V Sbjct: 838 ARLDRLA-----QTTSQPTSPADATTVTLADGLTASAGDWIATRKNARWLRTAQRGKWVK 892 Query: 731 GGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSA---- 786 G R + +V ED VVP R + + + + G+ T + +A Sbjct: 893 NGHRWIIRTVHEDGSLTVVPLRGRATPVRL-PARYVGTHTTLGYASTINAAQGMTAGRRD 951 Query: 787 ---TVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTR 843 T ++ L R + Y S E LA + + I + Sbjct: 952 IEGTCHTVLSDRLTRQQLYVALTRGRTENHCYGSTAEADPHRILAPKATHPPTAVDILSA 1011 Query: 844 AGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTE 903 +H +A H +H D+ T+A + AE Sbjct: 1012 ILARDGAQLSAHSAAAAHIDPFNRLHRV-------------ADMYTDALTAGAEHHAGPA 1058 Query: 904 LGGEIN 909 + I+ Sbjct: 1059 VMARID 1064 Score = 139 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 133/984 (13%), Positives = 243/984 (24%), Gaps = 142/984 (14%) Query: 769 KLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLA 828 +L + G + + S + G ++ + A Sbjct: 378 ELAKQFQVDHGREPTVVEMLALSQRATLETRQAKHEPRSLGEQRHVWRVQAVEVLGSQRA 437 Query: 829 RHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVE---SKKLAFSMV 885 V+ Q ++ E + + H + + T ++ + V ++L ++ Sbjct: 438 LTAMVADVTNQAVSQRVEITDKWVHEHAAAIIATVSESRATWTINHVRAEAQRELRYANH 497 Query: 886 ----DLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAK---GYGTGLLVSRASYE 938 +L+ + A + + L D + + T + S Sbjct: 498 PGGPELVNRLVASALSEHSVALTTDADAEKNEPAALRRRDGSSVYTRHDTTVYSSADILS 557 Query: 939 AEKSILRHILEGKEAVMPLME------RVPGELMEKLTSGQRAATRMILETSDRFTVVQG 992 AE+ IL + +L +GQ A R + + R + Sbjct: 558 AERRILAAAGLRDGRTVDDTSIGLALLEYQANQDVELNAGQVALVREMASSGARVQLALA 617 Query: 993 YAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM-RSAGVDAQTLASFLHDTQ 1051 AG GKTT A+ A + V+GL PT A + T+A + T+ Sbjct: 618 PAGTGKTTAMAALAGA----WRNAGGNVIGLAPTAGAAEVLNTDLNAPTDTIAKLVQLTE 673 Query: 1052 LQQRSGETPDFS----------NTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTD 1101 + D +TL ++DE+ M D+ A A G GD Sbjct: 674 TRAGEPAPADDPARKWFTAIDSDTLLIIDEAGMASTLDLDIVIAHALARGASVRLIGDDQ 733 Query: 1102 QLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPS 1161 QL +I+ G R R + + +VR T + + Sbjct: 734 QLASISAGGILRDLADRY--ETVTLSTVVRFTHPETGQAEAAAS---------------- 775 Query: 1162 QVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTP 1221 A + + A Y A D Sbjct: 776 ---------------LAIRAGDPAGIGFYIDHHRVHVGADATAADMAYRAWSADIAA--- 817 Query: 1222 EAREQTLIVTHLNEDRRVLNSMIH----DVREKAGELGKEQVMVPVLNTANIRDGEL--- 1274 ++++ NE LN + V + + G+ Sbjct: 818 --GRDSILLAPTNELVAELNERARLDRLAQTTSQPTSPADATTVTLADGLTASAGDWIAT 875 Query: 1275 RRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGN-TRLISPREAVAEGVTLYT 1333 R+ + W V N + I +DG +T+ G T + P V TL Sbjct: 876 RKNARWLRTAQRGKWVKNGHRWIIRTVHEDGSLTVVPLRGRATPVRLPARYVGTHTTLGY 935 Query: 1334 PDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQH 1393 TI + G T+ + TR+ + Sbjct: 936 ASTINAAQ-----------------GMTAGRRDIEGTCHTVLSDRLTRQQLYVALTRGRT 978 Query: 1394 IDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGW 1453 + Y T A L + A+ Sbjct: 979 ENHCYGST------AEADPHRILAPKATHPP---------TAV---------------DI 1008 Query: 1454 TDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPA 1513 AI A D + F+ + D+ AG A Sbjct: 1009 LSAI-------LARDGAQLSAHSAAAAHIDPFNRLHRVADMYTDALTAGAEHHAGPAVMA 1061 Query: 1514 RFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGEGRVKGSGDAQFVA 1573 R P+ A + L + D + ++ + D V Sbjct: 1062 RI--DTTAAALPHQVTEAQAWPVLRRHLALLAIEGHDPIAALHDAAATQLGDAHDPAAVL 1119 Query: 1574 LQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPGAITGGRVWGDIPDNSV 1633 A ++ + P V+ P + ++ Sbjct: 1120 DWRLPAPIGNTAADLGPLRWL----PAIPDVLAAD----PTWATCLQQRAQLVGELAENI 1171 Query: 1634 QPGAGNGEPVTAEVLAQRQAEEAIRRETERRADEIVRKMAENKPDLPDGKTEQAVREIAG 1693 + A + TA A+ ++ E + G + A R Sbjct: 1172 RTTARGWDAATAPAWARPLLDDHRNLLAEIAVFRAA-HNVDPADTRITGPHQNATRSAIV 1230 Query: 1694 QERDRAAITEREAALPEGVLREPQ 1717 Q+ + + R Q Sbjct: 1231 QQAIHTRLDDALTRAGADTTRWRQ 1254 Score = 51.5 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 63/415 (15%), Positives = 122/415 (29%), Gaps = 32/415 (7%) Query: 242 REAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADL 301 R A+ +R V A DT + + + +++ A T + Y+ +Q + Sbjct: 1535 RPYQQALAAAHTRWVHAEDTAELHRQLLTQLEAAITAATERGEHDAADRYQQHHNQASAQ 1594 Query: 302 RTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGI 361 + +A + IA + T + R L + + AR Sbjct: 1595 TERVDTAVRTARARLDEARAELIATVGGAAGIVTEQHLHDRRAYALRADTETLNAARRQA 1654 Query: 362 DEAISREQLIPLDREKGLFTSGIH----------VLDELSVRALSRDIMKQNRVTVHPEK 411 + + L + H + E+ A + + P Sbjct: 1655 RALDDQLARAEAAAARALAQTPAHTYDLGADLDQLHAEVDFLAAASAASPAAMYSPPPAA 1714 Query: 412 SVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRR 471 + AV+ + + S+ ++ G A + +A L A + + Sbjct: 1715 LEALDDKHRRAVTAITTNIHSVQLLHVHPG-ADKTAALAALAATAHHHNKPAIAVTDTES 1773 Query: 472 SQMNMKQDERLSGELITGRR--QLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHN 529 ++ I R + GS +IVD L+ + L AA N Sbjct: 1774 AERTYADAT----TTIDAYRDDVTSKHRTLPLGSLLIVDDDHALTADQLRWLAHSAAATN 1829 Query: 530 VQVLITDSGQRTGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAA 589 ++L+ + L+ + + + G D R R A D AA Sbjct: 1830 TKLLLIATPGEQQPDHTLLTVLANDLPHAQQLGVP----------DPEYRQTRTAIDRAA 1879 Query: 590 SVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSR 644 A + E++ Q +R + G L + L + R+R Sbjct: 1880 HHVAATNT-----PSTERSRAEQLLRQRDQVLGQLADIATSTARLDAIAARDRAR 1929 >UniRef50_Q6X3G0 TraA n=4 Tax=Gammaproteobacteria RepID=Q6X3G0_PSEAE Length = 1173 Score = 287 bits (734), Expect = 2e-75, Method: Composition-based stats. Identities = 153/988 (15%), Positives = 294/988 (29%), Gaps = 110/988 (11%) Query: 803 NGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHT 862 L R+G R+ + E + + ++ + + Sbjct: 247 EALERAGISARVDHRSYADQGVELTPTKHIGSDAVAMDRRGLEADRIDIH-NADRQEQAR 305 Query: 863 PAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDV 922 + + L + + + F+ D+ E + + F L + K L+ ++ Sbjct: 306 QIVERPEIILDKLTATQAVFTRRDIAAELNRYIDDADQFQGLLARLE---KSPLLVEMEP 362 Query: 923 AKGYGTGLLVSRASYEAEKSIL----RHILEGKEAVMPLMERVPGELMEKLTSGQRAATR 978 A G +R + E+ ++ R G+ V + + L++ Q+ A R Sbjct: 363 ANGRDPAKFSTREMIDTERGMVDSAERLARTGRHGVSGPITNAAIDGAGTLSAEQQNAVR 422 Query: 979 MILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMR-SAG 1037 +L+ VV G AG GK+ + A +++ V G +A E++ +G Sbjct: 423 HVLK-PGSLAVVIGDAGTGKSFSMKVAREA----WQAQGFNVRGAALAGKAADELQAGSG 477 Query: 1038 VDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVAS 1097 +D++TLAS + ++G+ S + ++DE+ M+G+ + R G + V Sbjct: 478 IDSRTLASL----EFAWKNGKDKLTSRDVLVIDEAGMIGSRQLGRVLKAAEQAGAKVVLL 533 Query: 1098 GDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAV-YSLINRDVERALSGLE 1156 GD QL AI G FR A A + E+ RQ A L V L+ Sbjct: 534 GDDKQLAAIEAGAAFRGVVQHVGA--AEITEVRRQKEAWARAAGQELARGSVADGLAAY- 590 Query: 1157 SVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDY 1216 A D +++ Y Sbjct: 591 -------------------------------------AERGHVKIHDSRDAARDSLAAAY 613 Query: 1217 TGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRR 1276 G + + +I+ H N+D + LN + + R++ GEL + G+ Sbjct: 614 VGD--QGKGSQIILAHSNKDVQALNEAVREARKERGELRGTARFMTERGGREFAPGDRIV 671 Query: 1277 LSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDT 1336 + + L + + + + L E + AV G + Sbjct: 672 ---FLKNDRDLGVKNGTLGTVERAEDGSLAVRLDSGEARRFQAAQYAAVDHGYAVTIHKA 728 Query: 1337 IRVGTGDRMRFTKSDRER-----GYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAE 1391 V +R G + D T + + + + Sbjct: 729 QGVTVDRAYLLATPGMDRSLAYVGMTRHREAATLFAGADDFTDRRAGRLVDHGAAPYENK 788 Query: 1392 QHIDLAYAITA-------HGAQGASETFAIALEGTEGNRKLMAGFESAYV-----ALS-- 1437 +Y T H G AIA G + ++ + + Sbjct: 789 PENRASYFATLENDNGERHTIWGVDLERAIAASGAKRGDRIGLEHGGSETVRLPDGTTAE 848 Query: 1438 RMKQHVQVYTD-NRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAA 1496 R HV+ + + K + D + + R R A Sbjct: 849 RNTWHVRGAAELAAGKLAQVLGRERPKESTLDFADRRGFDGESVVRRWLERGRAKVAELA 908 Query: 1497 G-------RAVLRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTD 1549 G R + R + P + PQ P ++ ++A I Sbjct: 909 GKMRDGLRRNLERHGRPDLMPATDIAGTPTVQRPQQNERTPEDEKKRRAAEIAAKFRQQV 968 Query: 1550 DGNGLRGFSGEGRVKGSGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIAG 1609 + + R + A E A + +A+ AG Sbjct: 969 SEERGEQAAPQQRPQAERPAPDPLAGFRAGVERAEAAGGGLALDVAKAQLAVAQEFHAAG 1028 Query: 1610 EGRPWNPGAITGGRVWGDIPDNSVQPGAGNGEPVTAEVLAQRQAEEAIRRETERRADEIV 1669 + + AI + AG +P A+ +R A + + +RA+ Sbjct: 1029 KDPRHHSAAIMQEGQQ--------RAFAGLAQPSQAKAEPERLAAVQVSEQDRKRAEMNA 1080 Query: 1670 RKMAENKPDLPDG----------KTEQAVREIAGQERDRAAITEREAALPEGVLREPQRV 1719 R+ L G ++ + + G+ R+R + V + + Sbjct: 1081 RQEVSRFKTLAAGRRNGIAGYTDRSPSKWQALPGELRERIERFNAMPKERQAVELDKMQR 1140 Query: 1720 REAVREIAR-ENLLQERLQQMERDMVRD 1746 A R + + + R QQ E++ RD Sbjct: 1141 ELADRYARNPQEITRSRQQQREQERGRD 1168 Score = 157 bits (396), Expect = 4e-36, Method: Composition-based stats. Identities = 90/779 (11%), Positives = 208/779 (26%), Gaps = 79/779 (10%) Query: 240 TIREAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRA 299 IR+ E + ++ + A + R + + K G D A + A Sbjct: 236 EIRQQWAEL-TNEALERAGISARVDHRSYADQGVELTP---TKHIGSDAVAMDRRGLE-A 290 Query: 300 DLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARA 359 D + + + + + L+ + FT D+ A + ++ + Sbjct: 291 DRIDIHNADRQEQARQIVERPEIILDKLTATQAVFTRRDIAAELNRYIDD----ADQFQG 346 Query: 360 GIDEAISREQLIPLDREKGL----FTSGIHVLDELSVRALSRDIMKQNRVTVH------- 408 + L+ ++ G F++ + E + + + + R V Sbjct: 347 LLARLEKSPLLVEMEPANGRDPAKFSTREMIDTERGMVDSAERLARTGRHGVSGPITNAA 406 Query: 409 PEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAA 468 + + +A +AV + + SLA+V G G G+ + + QG V+ A Sbjct: 407 IDGAGTLSAEQQNAVRHVLK-PGSLAVVIGDAG-TGKSFSMKVAREAWQAQGFNVRGAAL 464 Query: 469 DRRSQMNMKQDERLSGELITGRR--QLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAA 526 ++ ++ + + T +++D+ + ++ +L A Sbjct: 465 AGKAADELQAGSGIDSRTLASLEFAWKNGKDKLTSRDVLVIDEAGMIGSRQLGRVLKAAE 524 Query: 527 RHNVQVLITDSGQRTGTGSALMAMK-------DAGVNTYRWQGGEQRPAT---------- 569 + +V++ ++ A A + A + R Q A Sbjct: 525 QAGAKVVLLGDDKQLAAIEAGAAFRGVVQHVGAAEITEVRRQKEAWARAAGQELARGSVA 584 Query: 570 -----------IISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSEL 618 + R+ LA + G + ++ L +A+R Sbjct: 585 DGLAAYAERGHVKIHDSRDAARDSLAAAYVGDQGKG-SQIILAHSNKDVQALNEAVREAR 643 Query: 619 KTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQS 678 K +G L MT R R + + ++ ++R A+ Sbjct: 644 KERGELRGTARFMTE-------RGGREFAPGDRIVFLKNDRDLGVKNGTLGTVER--AED 694 Query: 679 HSLTLRDAQGETQVVRISSLDSSWSLF--RPEKMPVADGERLRVTGKIPGLRVSGGDRLQ 736 SL +R GE + + + + + K +R + R + Sbjct: 695 GSLAVRLDSGEARRFQAAQYAAVDHGYAVTIHKAQGVTVDRAYLLATPGMDRSLAYVGMT 754 Query: 737 VASVSEDAMTVVVP--GRAEPATLPVSDSPFTALKLENG-WVETPGHSVSDSATVFASVT 793 + R + +P+ + T + + T++ Sbjct: 755 RHREAATLFAGADDFTDRRAGRLVDHGAAPYENKPENRASYFATLENDNGERHTIWGVDL 814 Query: 794 QMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAI 853 + A+ + R G + ++ +E + + Sbjct: 815 ERAIAASGAKRGDRIGLEHGGSETVRLPDGTTAERNTWHVRGAAELAAGKLAQVLGRERP 874 Query: 854 SHQKSALHTPAQQAIHLALPVVESK------KLAFSMVDLLTEAKSFAAEGTGFTELGGE 907 + + +LA M D L Sbjct: 875 KESTLDFADRRGFDGESVVRRWLERGRAKVAELAGKMRDGLRRNLERHGRPDLMPATDIA 934 Query: 908 INAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELM 966 ++R R + E + + E + +R E Sbjct: 935 GTPTVQRPQQNERTPEDEKK------RRAAEIAAKFRQQVSEERGEQAAPQQRPQAERP 987 Score = 111 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 106/707 (14%), Positives = 198/707 (28%), Gaps = 41/707 (5%) Query: 1069 LDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKE 1128 +D + + A + G AV GD G+ F ++ R A Sbjct: 407 IDGAGTLSAEQ-QNAVRHVLKPGSLAVVIGDA------GTGKSFSMKVAREAWQAQGF-- 457 Query: 1129 IVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLA 1188 VR +A L + + + + + + E +L Sbjct: 458 NVRGAALAGKAADELQAGSGIDSRTLASLEFAWKNGKDKLTSRDVLVIDEAGMIGSRQLG 517 Query: 1189 EAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVR 1248 + A G + + + G Q + + E RR + Sbjct: 518 RVLKAAEQAGAKVVLLGDD--KQLAAIEAGAAFRGVVQHVGAAEITEVRRQKEAWARAAG 575 Query: 1249 EKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLIT 1308 ++ + +++ + R + A + D ++ + + Sbjct: 576 QELARGSVADGLAAYAERGHVKIHDSRDAA--RDSLAAAYVGDQGKGSQIILAHSNKDVQ 633 Query: 1309 LQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVS 1368 + E + GDR+ F K+DR+ G ++ TV Sbjct: 634 ALNEAVREARKERGELRGTARFMTERGGREFAPGDRIVFLKNDRDLGVKNGTLGTVERAE 693 Query: 1369 GDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAG 1428 S+ + Q +D YA+T H AQG + A L +R Sbjct: 694 DGSLAVRLDSGEARR--FQAAQYAAVDHGYAVTIHKAQGVTVDRAYLLATPGMDRS---- 747 Query: 1429 FESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTA--------HDVFEPKPDREVMN 1480 AYV ++R ++ ++ V G A + + + Sbjct: 748 --LAYVGMTRHREAATLFAGADDFTDRRAGRLVDHGAAPYENKPENRASYFATLENDNGE 805 Query: 1481 AERLFSTARELRDVAAGRAVLRQAGLAGGDSPARFIAPGRKYP--QPYVALPAFDRNGKS 1538 ++ E A+G + GL G S + G +V A GK Sbjct: 806 RHTIWGVDLERAIAASGAKRGDRIGLEHGGSETVRLPDGTTAERNTWHVRGAAELAAGKL 865 Query: 1539 AGIWLNP------LTTDDGNGLRGFSGEGRVKGSGDAQFVALQG--SRNGESLLADNMQD 1590 A + L D G G S R G A+ L G L + + Sbjct: 866 AQVLGRERPKESTLDFADRRGFDGESVVRRWLERGRAKVAELAGKMRDGLRRNLERHGRP 925 Query: 1591 GVRIARDNPDSGVVVRIAGEGRPWNPGAITGGRVWGDIPDNSVQPGAGNGEPVTAEVLAQ 1650 + A D + V R R V G A+ Sbjct: 926 DLMPATDIAGTPTVQRPQQNERTPEDEKKRRAAEIAAKFRQQVSEERGEQAAPQQRPQAE 985 Query: 1651 RQAEEAIR--RETERRADEIVRKMAENKPDLPDGKTEQAVREIAGQERDRAAITEREAAL 1708 R A + + R RA+ +A + ++ AAI + Sbjct: 986 RPAPDPLAGFRAGVERAEAAGGGLALDVAKAQLAVAQEFHAAGKDPRHHSAAIMQEGQQR 1045 Query: 1709 PEGVLREPQRVREAVREIARENLLQERLQQMERDMVRDLQKEKTLGG 1755 L +P + + +A + ++ ++ E + +++ + KTL Sbjct: 1046 AFAGLAQPSQAKAEPERLAAVQVSEQDRKRAEMNARQEVSRFKTLAA 1092 >UniRef50_C4DRT0 TrwC relaxase n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DRT0_9ACTO Length = 1623 Score = 287 bits (733), Expect = 4e-75, Method: Composition-based stats. Identities = 121/783 (15%), Positives = 235/783 (30%), Gaps = 129/783 (16%) Query: 61 PDGADLSRMQDGSNRH--RPGYDLTFSAPKSVSMMAMLGGDKRLID----AHNQAVDFAV 114 P ++ Q+ + + G+DL F+ KS +++ L D R+ AH+ AVD + Sbjct: 146 PAEIKQAKQQEAAKQRCGVAGFDLVFAPVKSAALVWALHPDVRVRQQVKAAHDAAVDSVM 205 Query: 115 RQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ-HNGEWK 173 +E A+ G + T L+ A F+H SR +P LHTH VAN +G+W+ Sbjct: 206 ELLEEHAAHTRAGTGGVAQLDTKGLIAARFDHFDSRAGDPNLHTHIPVANKVLGRDGKWR 265 Query: 174 TLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQV-EALGYETEVVG----KHGMWEMPG 228 +L +YA +A Y + + ++ LG K + E+ G Sbjct: 266 SLD---------ARGIYAMTVAASEHYNTRFETEMVHRLGVTFTDREAAGSKRPVREIDG 316 Query: 229 VP---VEAFSGRS--------QTIREAVGEDASL-------KSRDVAALDTRKSKQHVDP 270 +P ++ FS R Q I + + K A LDTR K + Sbjct: 317 IPAAMIKHFSRRRLDLEARYKQLIAAYRADHGTDPPAAICHKLARQATLDTRPDKPTLRS 376 Query: 271 EIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSER 330 +M + + F +A R + + + + + ++ + Sbjct: 377 LKQMRQEWEADLIHTFGGKALRHITSAVPTRSAVAEAVSL-STDEAETIAASVVRTVASQ 435 Query: 331 KVQFTYTDVLARTVGILP------------------------PENGVIERARAGIDE--- 363 +T ++ A L P + + A + +DE Sbjct: 436 HSTWTRWNLHAEAERTLRAAFRFPTREAHDHAVEVVMALATSPAHSIRIDAPSLVDEPDV 495 Query: 364 -AISREQLIPLDREKGLFTSGIHVLDELSVRALSRD--------IMKQNRVTVHPEKSVP 414 + + + +TS + E + ++ + S Sbjct: 496 LRRADGESVFHQHGSTRYTSQAVLDAEQRLLGAAKTPTDKGLSAGFVTGVLDGFDTTSHQ 555 Query: 415 RTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQM 474 G + A LA+ G GG AG+ + G + +A S Sbjct: 556 LDPGQRHLAAGFATTDRLLAVGIGPGG-AGKTTAMKAYAHTLTTAGHRLIPLATSANSAA 614 Query: 475 NMKQDERLSGELITGRRQLLEG-------------------MAFTPGSTVIVDQGEKLSL 515 + D + + A PG V+VD+ + Sbjct: 615 VLAADLDTPADNLHKFLWEHSRGHHANALKHGDPVPESAQFFALKPGDVVLVDEAGQAGT 674 Query: 516 KETLTLLDGAARHNVQVLITDSGQRTGT---GSALMAMKDA----GVNTYRWQGGEQRPA 568 L+ A RH QV + ++ G AL + ++T Sbjct: 675 FALDQLITIAKRHGAQVRLLGDHRQLSAVESGGALRLIAAEAGAFELDTLHRFSDPAEAR 734 Query: 569 TIISEPD-------------------RNVRYARLAGDFAASVKAGEESVAQVSGVREQAI 609 + + ++ + + + G SV + + Sbjct: 735 ATLKLREGDASGLDHYEIAGRIFGGSKDAMIEKAYTAWHRDLSTGRTSVMIAATNADVTA 794 Query: 610 LTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRY 669 L R++ G + V + + + + G+ + + R+ D + Sbjct: 795 LAARARTDRIRAGHVKTTGVDLHDGNTAGVGDWVITRHNH--RGLRLNRGKDFVRNGDIW 852 Query: 670 VIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWS----LFRPEKMPVADGERLRVTGKIP 725 + R + SL+LR V + + + ++ A + Sbjct: 853 TVIR-HHRDGSLSLRHHDHRGTVRIPADYVAEYVELAYATTATRIQGATVDTAHALVTDD 911 Query: 726 GLR 728 R Sbjct: 912 MAR 914 Score = 135 bits (339), Expect = 2e-29, Method: Composition-based stats. Identities = 140/1000 (14%), Positives = 249/1000 (24%), Gaps = 151/1000 (15%) Query: 821 TRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKL 880 + ++ T + ++ +A++ S A+ + V S+ Sbjct: 378 KQMRQEWEADLIHTFGGKALRHITSAVPTRSAVAEAVSLSTDEAETIAASVVRTVASQHS 437 Query: 881 AFSMVDLLTEAKSFAAEGTGFTELGGEINA---------------QIKRGDLLYVDVA-- 923 ++ +L EA+ F +A +I L+ Sbjct: 438 TWTRWNLHAEAERTLRAAFRFPTREAHDHAVEVVMALATSPAHSIRIDAPSLVDEPDVLR 497 Query: 924 --------KGYGTGLLVSRASYEAEKSILRHILE-----GKEAVMPLMERVPGELMEKLT 970 +G+ S+A +AE+ +L + + +L Sbjct: 498 RADGESVFHQHGSTRYTSQAVLDAEQRLLGAAKTPTDKGLSAGFVTGVLDGFDTTSHQLD 557 Query: 971 SGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAV 1030 GQR T V G G GKTT +A + R++ L + + Sbjct: 558 PGQRHLAAGFATTDRLLAVGIGPGGAGKTTAMKAYAHTLTTA----GHRLIPLATSANSA 613 Query: 1031 GEMR-SAGVDAQTLASFLHDTQLQQRSGE-------------TPDFSNTLFLLDESSMVG 1076 + A L FL + + + L+DE+ G Sbjct: 614 AVLAADLDTPADNLHKFLWEHSRGHHANALKHGDPVPESAQFFALKPGDVVLVDEAGQAG 673 Query: 1077 NTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPEL 1136 + + + G + GD QL A+ G RL + A + + R + Sbjct: 674 TFALDQLITIAKRHGAQVRLLGDHRQLSAVESGGALRLIAAEAGA--FELDTLHRFSDPA 731 Query: 1137 REAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAML 1196 + L E + Sbjct: 732 EARATLKLREGDASGLDHYE-----------------------------------IAGRI 756 Query: 1197 KGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGK 1256 G + + Y A RD ++++ N D L + R +AG + Sbjct: 757 FGGSKDAMIEKAYTAWHRD-----LSTGRTSVMIAATNADVTALAARARTDRIRAGHVKT 811 Query: 1257 EQVMVPVLNTANIRD--GELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEG 1314 V + NTA + D +R + + + DG ++L+ + Sbjct: 812 TGVDLHDGNTAGVGDWVITRHNHRGLRLNRGKDFVRNGDIWTVIR-HHRDGSLSLRHHDH 870 Query: 1315 NTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSG----- 1369 + P + VAE V L T G + + ++ + + Sbjct: 871 RGTVRIPADYVAEYVELAYATTATRIQGATVDTAHALVTDDMAREHLYVAASRARHNTSL 930 Query: 1370 ---DSVTLSDGQQTREIRPGQEQAE----QHIDLAYAI---------TAHGAQGASETFA 1413 V L + R RP + + ++ A T AQ Sbjct: 931 YAVTHVNLPVDEDDRLFRPDFDPDATAAREILETVVARESAERSATETIRDAQ-NDAESL 989 Query: 1414 IALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPK 1473 L G A E Y T A+ +D P Sbjct: 990 ATLVPQYGYALEQATREH-YTG----------------QLTTALGPDGAAMITNDGLSPL 1032 Query: 1474 PDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPARFIAPGRKY-PQPYVALPAF 1532 + + +A L DSPA +A +Y + A P Sbjct: 1033 IAALLAAETAGWK---PHDIIALA---ADDGPLELADSPAALLAWRIRYITDHHPAPPPI 1086 Query: 1533 DRNGKSAGIWLNPLTTDDGNGLRGFSGEGRVKGSGDAQFVALQG---SRNGESLLADNMQ 1589 + + L+ G S + A+ + Sbjct: 1087 AQPTAADARRYARALARIYPRLKPDPDTALTPPPPRTPSDQQPGPTISASQVHAWANAIA 1146 Query: 1590 DGVRIARDNPDSGVVVRIAGEGRPWNPGAITGGRVWGDIPDNSVQPGAGNGEPVTAEVLA 1649 + + + ++ P + G G+ + P T Sbjct: 1147 EHLGVDSAEIETHRAW-------PQLATTLAGHHAAGNDVHQLITTATRT--PSTDLTTV 1197 Query: 1650 QRQAEEAIRRETERRADEIVRKMAENKPDLPDGKTEQAVREIAGQERDRAAITEREAALP 1709 R A T R I A PD + E+ P Sbjct: 1198 VRTARRLATPATVRMPAAIRHHQAAITTMGPDLAHRARISAAWPAVITALTRAEQLGRGP 1257 Query: 1710 EGVLREPQRVREAVREIARENLLQERLQQMERDMVRDLQK 1749 E LR RE LL R+ + R D Sbjct: 1258 ETALRCAISQREFRGARDISQLLAWRIGRQNRIAHTDPSL 1297 Score = 46.2 bits (107), Expect = 0.013, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 41/119 (34%), Gaps = 8/119 (6%) Query: 21 DNYYVLGSMGERWAGRGAEQLGLQGS-VDKDVFTRLL-EGRLPDGADLSRMQDGSNRHRP 78 D Y G+ RW GRGA LGL G V +D L G P+ + + Sbjct: 34 DYYTQEGNPPGRWIGRGAHLLGLDGQTVTEDQMKNLFGHGAHPNAEAIIDKYIADHTRPG 93 Query: 79 GYD-----LTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVEALASTRVMTDGQSE 132 D LT +A K + G +RL + +Q V + + + Sbjct: 94 MTDAQIRFLTAAAEKHAQLGRRFGAYRRL-EPFDQRVADRLDAIAERTGRAATPAEIKQ 151 >UniRef50_A4T240 ATP-dependent exoDNAse (Exonuclease V) alpha subunit-helicase superfamily I member-like protein n=5 Tax=Mycobacterium RepID=A4T240_MYCGI Length = 1955 Score = 285 bits (729), Expect = 9e-75, Method: Composition-based stats. Identities = 131/854 (15%), Positives = 242/854 (28%), Gaps = 130/854 (15%) Query: 57 EGRLPDGAD-----LSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGG---DKRLIDAHNQ 108 GR P ++R GYDLTFS KSVS + + +++ AH+ Sbjct: 176 YGRPPADDRELSGFIARNTRAKTTAVAGYDLTFSPVKSVSALWAIAPLPVAEQIEAAHDA 235 Query: 109 AVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANV--- 165 AV + ++ A+ G V T L+ A+F H SR +P LHTH ++N Sbjct: 236 AVADVLEWLQEQAAFTRTGAGGVAQVDTEGLIAAVFTHRDSRAGDPDLHTHVAISNKVSY 295 Query: 166 TQHNG--EWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQV-EALGYET----EVV 218 NG W L + + +A LY +L+ + LG Sbjct: 296 VDANGVRRWLALDGQPLHRV---------TVAASELYNTRLEAHLIARLGVRFAEQSRGR 346 Query: 219 GKHGMWEMPGVP---VEAFSGRSQTIREAVGEDA---------------SLKSRDVAALD 260 GK + E+ G+ +E +S R I+ E A + A L+ Sbjct: 347 GKRPVREIVGMSARLMERWSSRRAAIKARTAELAKQFQADHGREPTNVEIIALAQHATLE 406 Query: 261 TRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAV 320 +R++K + + +T R T + D Sbjct: 407 SREAKHEPRSLGEQRQEWRTQAVEVLGERGVNQMLSDTLAAPQTTREAVTIDEEWFASRA 466 Query: 321 TQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAG-------------------- 360 + IA ++E + + V A + + + + A Sbjct: 467 GELIATVAESRSTWQRHHVRAEALRMARGHDVAHDVALVERLTDTALGEGFSVPHARVED 526 Query: 361 ------IDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVP 414 + + L+TS + E + + E ++ Sbjct: 527 AELGEPVALRRRDGASVYRRHGVALYTSQETLAAEQRILDAVHRGDGRVASAADVEMALA 586 Query: 415 --------RTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQII 466 G + V+ +A +A+ G G+ +A L R G V + Sbjct: 587 DSTARGRTLNPGQAALVTEMATAGRRVALALAPAG-TGKTTAMAALAHAWRSSGGHVIGL 645 Query: 467 AADRRSQMNMKQDERLSGELITGRRQLLEGMAFT------------PGSTVIVDQGEKLS 514 A + + + +D + + + + P + ++VD+ K + Sbjct: 646 APTADAAIVLGEDLGATTDTLDKYVWSADPAKAATSHVPDWFSRVGPDTLIVVDEAGKAA 705 Query: 515 LKETLTLLDGAARHNVQVLITDSGQR---TGTGSALMAMKDA----GVNTYRWQGGEQRP 567 ++ A + V + + G L + +A ++ Sbjct: 706 TAGLDAMIRDALKKGASVRLVGDDGQLSSISAGGILRDIAEATDALTLSEVVRFKSPAEA 765 Query: 568 ATIISEPD-------------------RNVRYARLAGDFAASVKAGEESVAQVSGVREQA 608 A ++ D + A + AG +S+ Sbjct: 766 AAGLALHDADPAGIGFYIDHHRIHVGTDETAADMAYQAWRADLAAGGDSILLAPTNDVIN 825 Query: 609 ILTQAIR-SELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHD 667 L R L + A + R R + N R+ Sbjct: 826 ELNARARIDRLAADPEAAKSPTVVLAEQLHASVGDTIRTRKNNRR--IGIGRNDFVRNGY 883 Query: 668 RYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGL 727 RY I V A G + + +L + A G +T Sbjct: 884 RYTITEVLADGGVKARHLRSGRIVTLPADYIAEHVTLGYAATIDSAQG----LTSGSRDT 939 Query: 728 RVSGGDRLQVAS--VSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDS 785 R G V S ++ + V + + L +S + +L + P +V Sbjct: 940 R---GTCHIVGSDMLTRQHLYVALTRGTDENHLYLSTAEGDPHRLLSPKATHPDTAVDVL 996 Query: 786 ATVFASVTQMAMDN 799 + A Sbjct: 997 TRILARNGAQVSAT 1010 Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats. Identities = 139/959 (14%), Positives = 249/959 (25%), Gaps = 134/959 (13%) Query: 813 RLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLAL 872 R + + A + T+ E +RAGE A S H +A+ +A Sbjct: 435 RGVNQMLSDTLAAPQTTREAVTIDEEWFASRAGELIATVAESRSTWQRHHVRAEALRMAR 494 Query: 873 PVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLV 932 + +A L A E+ + V + +G L Sbjct: 495 GHDVAHDVALVER-LTDTALGEGFSVPHARVEDAELGEPVALRRRDGASVYRRHGVALYT 553 Query: 933 SRASYEAEKSILRHILEGKEAVMPLMERVPG-----ELMEKLTSGQRAATRMILETSDRF 987 S+ + AE+ IL + G V + L GQ A + R Sbjct: 554 SQETLAAEQRILDAVHRGDGRVASAADVEMALADSTARGRTLNPGQAALVTEMATAGRRV 613 Query: 988 TVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA-GVDAQTLASF 1046 + AG GKTT +A+ S V+GL PT A + G TL + Sbjct: 614 ALALAPAGTGKTTAM----AALAHAWRSSGGHVIGLAPTADAAIVLGEDLGATTDTLDKY 669 Query: 1047 LHDTQLQQRSGETPDF------SNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDT 1100 + + + +TL ++DE+ + G GD Sbjct: 670 VWSADPAKAATSHVPDWFSRVGPDTLIVVDEAGKAATAGLDAMIRDALKKGASVRLVGDD 729 Query: 1101 DQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKP 1160 QL +I+ G R A D + E+VR A ++ + Sbjct: 730 GQLSSISAGGILRDIAE--ATDALTLSEVVRFKSPAEAAAGLALHDADPAGIGFY----- 782 Query: 1161 SQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRT 1220 + Y+A D Sbjct: 783 ------------------------------IDHHRIHVGTDETAADMAYQAWRAD----- 807 Query: 1221 PEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGE--LRRLS 1278 A ++++ N+ LN+ R A + V + + G+ R + Sbjct: 808 LAAGGDSILLAPTNDVINELNARARIDRLAADPEAAKSPTVVLAEQLHASVGDTIRTRKN 867 Query: 1279 TWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIR 1338 V N Y DG + + + P + +AE VTL Sbjct: 868 NRRIGIGRNDFVRNGYRYTITEVLADGGVKARHLRSGRIVTLPADYIAEHVTL------- 920 Query: 1339 VGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAY 1398 T+ + G + D + T I QH+ Y Sbjct: 921 --------------------GYAATIDSAQGLTSGSRDTRGTCHIVGSDMLTRQHL---Y 957 Query: 1399 -AITAHGAQGASETFAIALEGTEGNRKLMAGFESAY--VALSRMKQHVQVYTDNRQGWTD 1455 A+T ++ + L EG+ + ++ + A+ T Sbjct: 958 VALTR-----GTDENHLYLSTAEGDPHRLLSPKATHPDTAV--------------DVLTR 998 Query: 1456 AINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPARF 1515 + + +A R+ + A ++ A G A + G+ D Sbjct: 999 ILARNGAQVSAT-----TAARQAADPAARLQAAADMYYDALGAAAENRLGVGARDRLDAI 1053 Query: 1516 IAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGEGRVKGSGDAQFVALQ 1575 A P RN + + L D L + L Sbjct: 1054 ADEVIPQLSQREAWPVLRRN-----LSVLALRGADPRELLTEALAKGSVSDAADPAAVLD 1108 Query: 1576 GSRNGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPGAITGGRVWGDIPDNSVQP 1635 + A G+ + R P + P + + ++ Sbjct: 1109 HRIDP----AGTHSSGIGVLRWLPAVPEALAED----PQWGAYLARREKLVEDLAGEIRE 1160 Query: 1636 GAGNGEPVTAEVLAQRQAEEAIRRETERRADEIVRKMAENKPDLPDGKT-EQAVREIAGQ 1694 A TA A+ E +AE + + R + Sbjct: 1161 RARGWTNATAPAWARPLITVNPVLTAESAVFRAATGVAEADTRITGARQFPVRSRGVQAA 1220 Query: 1695 ERDRAAITEREAALPEGVLREPQRVREAVREIARENLLQERLQQMERDMVRDLQKEKTL 1753 + +AA + R + + + + Q+ + Q + + Sbjct: 1221 LQRQAAADIGRHSADTS--RWNDVIDGIDPRLRSDAYWPQLADQLVKAARITPQLRQII 1277 >UniRef50_A1RCJ6 Toprim domain n=5 Tax=Actinomycetales RepID=A1RCJ6_ARTAT Length = 2109 Score = 283 bits (724), Expect = 3e-74, Method: Composition-based stats. Identities = 139/997 (13%), Positives = 263/997 (26%), Gaps = 181/997 (18%) Query: 40 QLGLQGSVDKDVFTRLLEGRLP-----DGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMA 94 + ++ + + F R GR P GA +++ GYDLTF+ KSVS + Sbjct: 275 RAKIRTELGNEHFLR-EHGRAPIDDRERGAFMAKATRQQTTAVAGYDLTFAPVKSVSTLW 333 Query: 95 MLGG---DKRLIDAHNQAVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRD 151 L K + AH+ AV+ ++ +E G + V L+ +F H +R Sbjct: 334 ALADRDVAKEIEAAHHAAVEATLKWLEKEVLFTRRGRGGLQQVKAKGLIAGMFTHRDARS 393 Query: 152 QEPQLHTHAVVANVTQHN-GEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQV-E 209 +P LHTH V+N Q G W + +Y + +Y ++ ++ Sbjct: 394 SDPHLHTHVAVSNKVQDETGRWLAVDGRV---------LYKANVTLAEMYNTLIESELIA 444 Query: 210 ALGYETE--------VVGKHGMWEMPGVPVEA---FSGRSQTIREAVGEDASL------- 251 LG E V K + E+ GV +S R I E A+ Sbjct: 445 RLGVRFENRRSGLNKGVDKRPVREIVGVDERLAKSWSKRHSAIEARRRELAAAFQAEHGR 504 Query: 252 --------KSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRT 303 + A TR++K E D D Sbjct: 505 PPTEGEAVTLAEKAWDQTRQAKHAPRAEADQRAAWLAEAAAIIGSEQAVR--DMVEDCLG 562 Query: 304 LTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDE 363 P V + Q +A ++E + + + A + +D Sbjct: 563 HRPDAQDVTDQWVAETAQQVVARVAEDRATWQVWHLRAEAQRQARAHGIRLTELDDAVDR 622 Query: 364 ----AISREQLIPLDREK------------------------------------------ 377 AI + D + Sbjct: 623 VVATAIREHSIAFNDPDPLTRETTAAEQDVTIPAPLQRTDRPAEGGVDAEEVVSAYSLAG 682 Query: 378 -GLFTSGIHVLDELSVRALSRDIMKQNRVTVH--------PEKSVPRTAGYSDAVSVLAQ 428 +TS + E + +R + V + A V +A Sbjct: 683 ARQYTSRAVIEAERRIVESARHTGGRTISEVRVGIAIAEAAANELQLNAAQQSLVREMAT 742 Query: 429 DRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLS----- 483 ++ + G G+ + L ++ G V +A + + L Sbjct: 743 SGRAVQLALAPAG-TGKTTAMQVLTRAWQDSGGTVIGLAPSAVAAQELGASINLENPDTN 801 Query: 484 ---------------------GELITGRRQLLEGMA-------FTPGSTVIVDQGEKLSL 515 + + + + V++D+ + Sbjct: 802 TAGTSKNLLNGPWRPGRKKVRADTLAKLVWHAKHGDAPAWMEKINSKTLVLIDEAGMAAT 861 Query: 516 KETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPD 575 + +D QV + ++ + +A ++D Q G + + + Sbjct: 862 TDLAAAIDYITSRGGQVRLVGDDRQLASVAAGGVLRD-----IAHQIGAVTLSEVHRFRN 916 Query: 576 RNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALS 635 + +++ G+ S R G LG A + Sbjct: 917 PDGSLNHAEAAATLALRDGDPSAIAFYADR-----------GRIHVGDLG--ACADQAYA 963 Query: 636 PVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRI 695 D + P + +DR LTL D + RI Sbjct: 964 AWAADRADGTDSVLIAPTRDLVAELNTRARNDRLAGQPDKEIGRVLTLADGTKVSAGDRI 1023 Query: 696 SSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEP 755 + ++ L V +G+R V ++TV+ + Sbjct: 1024 ITRENDRRLRISRTNWVKNGDRWHVKNVNTD----------------GSLTVIHDKLGKT 1067 Query: 756 ATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLY 815 TLP +D ++L ++ N L+R LY Sbjct: 1068 ITLP-ADYVSKTVQLGYATTVHGAQGITTGTCHVVLTGDED-RNLLYVALSRGKFANHLY 1125 Query: 816 SSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVV 875 ++ L R + + + T + + + + P Sbjct: 1126 LNVASDGDPHNLIRPEALIPPTALDRI--------TEMLRRDGSPVSATTALRDQTNPHQ 1177 Query: 876 ESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQI 912 +A D +T G ++ A + Sbjct: 1178 LLGDMAARYHDAVTAGAENLIGPVGMDKIDAHAEALL 1214 Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 144/1000 (14%), Positives = 265/1000 (26%), Gaps = 192/1000 (19%) Query: 810 RDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIH 869 D + + T + +A V + A + +++ H + Sbjct: 558 EDCLGHRPDAQDVTDQWVAETAQQVVARVAEDRATWQVWHLRAEAQRQARAHGIRLTELD 617 Query: 870 LALPV-----VESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAK 924 A+ + +AF+ D LT + A + + + G V+ Sbjct: 618 DAVDRVVATAIREHSIAFNDPDPLTRETTAAEQDVTIPAPLQRTDRPAEGGVDAEEVVSA 677 Query: 925 GY--GTGLLVSRASYEAEKSILRHILEGKEAVMPLM-----ERVPGELMEKLTSGQRAAT 977 G SRA EAE+ I+ + + +L + Q++ Sbjct: 678 YSLAGARQYTSRAVIEAERRIVESARHTGGRTISEVRVGIAIAEAAANELQLNAAQQSLV 737 Query: 978 RMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA- 1036 R + + + AG GKTT + + V+GL P+ A E+ ++ Sbjct: 738 REMATSGRAVQLALAPAGTGKTTAM----QVLTRAWQDSGGTVIGLAPSAVAAQELGASI 793 Query: 1037 --------------------------GVDAQTLASFLHDTQLQQRSG-ETPDFSNTLFLL 1069 V A TLA + + S TL L+ Sbjct: 794 NLENPDTNTAGTSKNLLNGPWRPGRKKVRADTLAKLVWHAKHGDAPAWMEKINSKTLVLI 853 Query: 1070 DESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEI 1129 DE+ M TD+A A I + GG+ GD QL ++A G R + E+ Sbjct: 854 DEAGMAATTDLAAAIDYITSRGGQVRLVGDDRQLASVAAGGVLRDIAH--QIGAVTLSEV 911 Query: 1130 VRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAE 1189 R P A + + +A Sbjct: 912 HRFRN-----------------------------PDGSLNHAEAAATLALRDGDPSAIAF 942 Query: 1190 AQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVRE 1249 + + ++++ + LN+ + R Sbjct: 943 YADRGRIHVGDLG-----ACADQAYAAWAADRADGTDSVLIAPTRDLVAELNTRARNDRL 997 Query: 1250 KAGELGKEQVMVPVLNTANIRDGEL---RRLSTWETHRDALVLVDNVYHRIAGISKDDGL 1306 + ++ + + + G+ R + + + ++ DG Sbjct: 998 AGQPDKEIGRVLTLADGTKVSAGDRIITRENDRRLRISRTNWVKNGDRWHVKNVN-TDGS 1056 Query: 1307 ITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTA 1366 +T+ + + P + V++ V L T+ +G + V Sbjct: 1057 LTVIHDKLGKTITLPADYVSKTVQLGYATTVHGA-------------QGITTGTCHVVLT 1103 Query: 1367 VSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLM 1426 D L ++G ++G+ + Sbjct: 1104 GDEDRNLLYVAL--------------------------SRGKFANHLYLNVASDGDPHNL 1137 Query: 1427 AGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFS 1486 E+ TA D R+ + Sbjct: 1138 IRPEAL-----------------------------IPPTALDRITEMLRRDGSPVSATTA 1168 Query: 1487 TARELRDVAAGRAVLRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPL 1546 + GD AR+ + + D+ A L L Sbjct: 1169 LRDQTNP-----------HQLLGDMAARYHDAVTAGAENLIGPVGMDKIDAHAEALLTGL 1217 Query: 1547 TTDDG--------NGLRGFSGEGRVKGSGDAQFVALQGSRNGESLLADNMQDGV-RIARD 1597 T + + +L +R+ ++L + D V + Sbjct: 1218 TEAPAWPTLRSHLALIALDDHSPLKLLTAAVGVGSLADARDPAAVLDARIDDLVADLNAA 1277 Query: 1598 NPDSGVVVRIAGEGRPWNPG---AITGGRVWGD----------IPDNSVQPGAGNGEPVT 1644 P PW PG + WG ++V+ A N T Sbjct: 1278 RPHDPDTPPATDAPLPWLPGIPARLADAHDWGPFAGAYHQLVREQIDAVRDAARNWTGAT 1337 Query: 1645 AEVLAQRQAEEAIRRETERRADEIVRKM---AENKPDLPDGKTEQAVREIAGQERDRAAI 1701 A AQ E+ +TE RAD V + ++ P G A Q + A+ Sbjct: 1338 APAWAQPFLED---EDTELRADLAVWRAVAGTDDNDLRPTGDRTIGAPG-AYQAKLNRAV 1393 Query: 1702 TEREAALPEGVLREPQRVREAVREIARENLLQERLQQMER 1741 E + P Q + E VR L +RL ++ER Sbjct: 1394 REARPSYPFSQRTWYQVLPETVRADPWITPLCQRLARLER 1433 >UniRef50_C8XHE2 TrwC relaxase n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XHE2_NAKMY Length = 1231 Score = 283 bits (723), Expect = 5e-74, Method: Composition-based stats. Identities = 151/1009 (14%), Positives = 287/1009 (28%), Gaps = 123/1009 (12%) Query: 70 QDGSNRHRPGYDLTFSAPKSVSMMAMLGGD---KRLIDAHNQAVDFAVRQVEALASTRVM 126 + + G+DLTFS PKSVS + L ++L AH A+ + +E A + Sbjct: 127 ETKTRTAVAGFDLTFSVPKSVSALWALAPAPVQEQLYLAHRAALAATLELIEGEAVFTRL 186 Query: 127 TDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ-HNGEWKTLSSDKVGKTGF 185 V T LV A F+H SR +PQLHTH VAN Q +G W+TL S + + Sbjct: 187 GHNGVRRVRTAGLVAAAFDHWDSRRGDPQLHTHVTVANRVQGPDGRWRTLDSATLHQA-- 244 Query: 186 IENVYANQIAFGRLYREKLKEQV-EALGYETEVVGKHG------MWEMPGVP---VEAFS 235 +A+ Y L +++ G + + E+ VP + AFS Sbjct: 245 -------AVAYSETYDLLLADEITRRTGLTWDRRERQAGSNRRIGRELAPVPDALIAAFS 297 Query: 236 GRSQTIREAVGE---------------DASLKSRDVAALDTRKSKQHVDPEIKMAEWMQT 280 RS I AV +A + R L TR K + + +W T Sbjct: 298 QRSADIEAAVDTAIAQAVLRTGRRPDVNAINRIRQHLTLATRDRKHAPNLAESVQQWRAT 357 Query: 281 LKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVL 340 + GPA D + + + ++ + +T ++ Sbjct: 358 AEHVLDRDPTDWATTATTTGQAGPLLGPADLDDIETEAIALGVVDAVAAARPTWTRWNLT 417 Query: 341 ARTVGILPPENGVIE-------------RARAGIDEAISREQLIPLDREKG--------- 378 A T+ L A + A++ +L P+ Sbjct: 418 AETMRQLAARGLQFTIPADAVAVRDRVVAAAQRLSVALTPPELAPIPDALRDADGASPFT 477 Query: 379 ---LFTSGIHVLDELSVRALSRDI----------MKQNRVTVHPEKSVPRTAGYSDAVSV 425 +FTS + E + L +D + + A Sbjct: 478 PPEVFTSTAVLAAEDQLLRLGQDRSGPAVDPDRARRVAGQDLPGRDHALAAEDQRPAAVQ 537 Query: 426 LAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQ--GREVQIIAADRRSQMNMKQDERLS 483 + + ++ G G G+ +A + + + V +A + + D + Sbjct: 538 IVTSGRVVDVLVGPAG-TGKTTTMAGVRAIWEAEYGPGTVVGLAPSAMAAQVLAADVGIV 596 Query: 484 GELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGT 543 + + ++ ++ E + G +V R Sbjct: 597 TDNTAQWIAQQDQQTRREHRIRLLTDA--ITTPENPNRIQGLRAARGRVQGEYDQWRLRP 654 Query: 544 GSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSG 603 G L+ + T+ + A ++ +L + V+ G + Sbjct: 655 GQLLIVDEAGMCGTFTLARLAGQAAKAGAKLLLVGDPCQL-----SPVETGGAFGLLCAR 709 Query: 604 VREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRD-MYRPGMVMEQWNPE 662 + A LTQ R E L + + Y R G + + Sbjct: 710 HPDPATLTQVRRFTDPDGTRRAWEEQAADRLRSGDSTALAEYDAHGRVRSGDQDQMADNA 769 Query: 663 T-----RSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGER 717 +HD + A + ++ + + T ++ +D++ + + V G+ Sbjct: 770 YTAWLSDTHDGLTSVLIAADNDTVVELNQRARTDLISTGQVDNTATAPVRNGLSVGRGDV 829 Query: 718 LRVTGKIPGL-------------RVSGGDRLQVASVSEDAMTVVV----PGRAEPATLPV 760 + V G R +V D V Sbjct: 830 IVTRRIDRTQPDGTPRTADSGDGFVRNGQRWRVERAHRDGSLTVRLHTSDDTGTTPIRLS 889 Query: 761 SDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDE 820 + + L ++ + + + A + R Y LD Sbjct: 890 ATYVHDHVDLGYATTAHRAQGLTVDTSHVLA-DALTQREAFYVAMTRGRYRNTAYLVLDP 948 Query: 821 TRTAEKLARHPSFTVVSEQ----------IKTRAGETSLETAISHQKSALHTPAQQAIHL 870 T + HP + I + + + H + Sbjct: 949 AATVRGIVDHPIGGSADQDSWTTQQVAESISDHSSADTSAHETIRTEQDRHASIRTLADE 1008 Query: 871 ALPVVESKKLAFSMVDLL-----TEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKG 925 A + + LL A + F EL I G + ++ + Sbjct: 1009 ADAIAAYAHEIAAAELLLTVFGDRPAIRRLLDDEHFPELVLAIRQAYHTGMNIAGELPRI 1068 Query: 926 YGTGLLVSRASYEAEKSILRHILEG-KEAVMPLMERVPGELMEKLTSGQ 973 + S + + +I H+ + L+ + + L+ Q Sbjct: 1069 VPAYSIESMTAQQLTTAIRVHLRTRPRNGGAELVAGIIVDATVGLSDLQ 1117 Score = 157 bits (397), Expect = 3e-36, Method: Composition-based stats. Identities = 103/625 (16%), Positives = 168/625 (26%), Gaps = 147/625 (23%) Query: 881 AFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAE 940 A ++ D + A + EL +A + + S A AE Sbjct: 437 AVAVRDRVVAAAQRLSVALTPPELAPIPDALRD-----ADGASPFTPPEVFTSTAVLAAE 491 Query: 941 KSILRHILEGKEAVMPLMERVPGELMEKL--------TSGQRAATRMILETSDRFTVVQG 992 +LR + + + +R + L QR A I+ + V+ G Sbjct: 492 DQLLR-LGQDRSGPAVDPDRARRVAGQDLPGRDHALAAEDQRPAAVQIVTSGRVVDVLVG 550 Query: 993 YAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM-RSAGVDAQTLASFLHDTQ 1051 AG GKTT V + E VVGL P+ A + G+ A ++ Sbjct: 551 PAGTGKTTTMAGVRAIWE--AEYGPGTVVGLAPSAMAAQVLAADVGIVTDNTAQWIAQQD 608 Query: 1052 LQQRSGET----------------------------------PDFSNTLFLLDESSMVGN 1077 Q R L ++DE+ M G Sbjct: 609 QQTRREHRIRLLTDAITTPENPNRIQGLRAARGRVQGEYDQWRLRPGQLLIVDEAGMCGT 668 Query: 1078 TDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELR 1137 +AR A G + + GD QL + G F L R A + ++ R T Sbjct: 669 FTLARLAGQAAKAGAKLLLVGDPCQLSPVETGGAFGLLCARHPDP-ATLTQVRRFTD--- 724 Query: 1138 EAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLK 1197 P E + LAE ++ Sbjct: 725 --------------------------PDGTRRAWEEQAADRLRSGDSTALAEYDAHGRVR 758 Query: 1198 GEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKE 1257 + Y A + D ++++ N+ LN G++ Sbjct: 759 SGDQDQMADNAYTAWLSD-----THDGLTSVLIAADNDTVVELNQRARTDLISTGQVDNT 813 Query: 1258 QVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTR 1317 R+ L + I + T + A+ Sbjct: 814 AT---------------------APVRNGLSVGRGDVIVTRRIDRTQPDGTPRTAD---- 848 Query: 1318 LISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDG 1377 V G R R ++ R+ + SD Sbjct: 849 ----------------SGDGFVRNGQRWRVERAHRDGSLTV------------RLHTSDD 880 Query: 1378 QQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALS 1437 T IR H+DL YA TAH AQG + + L + E+ YVA++ Sbjct: 881 TGTTPIRLSATYVHDHVDLGYATTAHRAQGLTVDTSHVLADA------LTQREAFYVAMT 934 Query: 1438 RMKQH--VQVYTDNRQGWTDAINNA 1460 R + + D +++ Sbjct: 935 RGRYRNTAYLVLDPAATVRGIVDHP 959 >UniRef50_A9KS02 Helicase, RecD/TraA family n=32 Tax=Bacteria RepID=A9KS02_CLOPH Length = 742 Score = 282 bits (720), Expect = 1e-73, Method: Composition-based stats. Identities = 99/759 (13%), Positives = 204/759 (26%), Gaps = 148/759 (19%) Query: 727 LRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSA 786 + + + E V + S ++ +++ G S++ + Sbjct: 102 RKFKEKTFVIIEEEPERLSEVKGISDKLAREIYRQFSEKREMRSAMLFLQQYGISLNLAV 161 Query: 787 TVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGE 846 ++ + + N R D+ A ++ + Sbjct: 162 KIYKQYGERMYEVIKENPY-RLAEDISGVGFKIADEIASRIGIRTDSDYRVK-------- 212 Query: 847 TSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGG 906 ++ L + + M L+ + + Sbjct: 213 ------------------AGILYNLLLASGNGHVYLPMHSLVGKTCEMLMVEADT--VKR 252 Query: 907 EINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILE-------GKEAVMPLME 959 I + L+ + + + S + Y E ++ + + V + Sbjct: 253 HITSLALEKKLVVKESGEEQH---VYSTSFYYMELNVANMLSDLSISYDISPAQVETRLA 309 Query: 960 RVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPR 1019 ++ E +L QR A + + T ++ + E+E Sbjct: 310 KIEQETNLELDEMQRYAVMEAVRSGLLIITGGPG------TGKTTTINTILRFFEAEGMD 363 Query: 1020 VVGLGPTHRAVGEMRSA-GVDAQTLASFLH--------DTQLQQRSGETPDFSNTLFLLD 1070 ++ PT RA M+ G +A T+ L D ++ E + ++D Sbjct: 364 MLLAAPTGRAAKRMKETTGYEASTIHRLLELTKGMDDKDGRMSFERNELNPLEADVIIID 423 Query: 1071 ESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIV 1130 E SMV + M I G R + GD +QL ++ PG R A V ++K+I Sbjct: 424 EMSMVDISLMHSLLKAIT-VGTRIILVGDVNQLPSVGPGNVLRDMIESKAFPVVMLKKIF 482 Query: 1131 RQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEA 1190 RQ E V + E ++ K + +++ + Sbjct: 483 RQASESDIIVNAHKINSGEH-ITLDNKSKDFFLLKRDDVNVIISVIISLVR--------- 532 Query: 1191 QQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREK 1250 D A V D TP + + Sbjct: 533 ------------DKMPKYVNASVYDIQVLTPMRKG------------------------E 556 Query: 1251 AGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQ 1310 G QV+ LN ++ E D ++ V N Y G+ Sbjct: 557 LGVERLNQVLQQYLNPSSQEKKEKEHFGGIFREGDKVMQVKNNYQIAWETKSRYGITI-- 614 Query: 1311 DAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGD 1370 D G + ++ Sbjct: 615 ----------------------------------------DSGTGVFNGDTGVIKEINLF 634 Query: 1371 SVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFE 1430 + L+ + + ++LAYA+T H +QG+ + +++ Sbjct: 635 AEELTVEFDEGRLVTYPFSQLEELELAYAVTIHKSQGSEYPAV--VLPIYSGPRMLFNRN 692 Query: 1431 SAYVALSRMKQHVQVYTDNRQGWTDAINNAVQ--KGTAH 1467 Y A++R KQ V + + I+N + + + Sbjct: 693 LLYTAVTRAKQCVTIVGSD-NMVQSMIDNESELKRYSGL 730 Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats. Identities = 75/677 (11%), Positives = 178/677 (26%), Gaps = 105/677 (15%) Query: 194 IAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVEAFSGRSQTIREAVGEDASLKS 253 G ++ + + + + E+ G+ ++ I E ++S Sbjct: 90 KGVGTALAARIVRKFKEKTFVIIEEEPERLSEVKGISD----KLAREIYRQFSEKREMRS 145 Query: 254 RDV--AALDTRKSKQHVDPEIKMAEWMQTLKETGFDI-RAYRDAADQRADLRTLTPGPAS 310 + + + + +KE + + + AD G + Sbjct: 146 AMLFLQQYGISLNLAVKIYKQYGERMYEVIKENPYRLAEDISGVGFKIADEIASRIGIRT 205 Query: 311 QDGPDVQQ-AVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQ 369 V+ + + V ++ +T +L E ++ R A+ ++ Sbjct: 206 DSDYRVKAGILYNLLLASGNGHVYLPMHSLVGKTCEMLMVEADTVK--RHITSLALEKKL 263 Query: 370 LIPLDREKGLFTSGIHVLDELSVRALSRDI----------MKQNRVTVHPEKSVPRTAGY 419 ++ E+ S EL+V + D+ ++ + E ++ Sbjct: 264 VVKESGEEQHVYSTSFYYMELNVANMLSDLSISYDISPAQVETRLAKIEQETNLELDEMQ 323 Query: 420 SDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQD 479 AV + + G + ++ +G ++ + A R+ MK+ Sbjct: 324 RYAVMEAVRSGLLIITGGPGTGKT---TTINTILRFFEAEGMDMLLAAPTGRAAKRMKET 380 Query: 480 ERLSGELITGRRQLLEGMAFTPG--------------STVIVDQGEKLSLKETLTLLDGA 525 I +L +GM G +I+D+ + + +LL Sbjct: 381 TGYEASTIHRLLELTKGMDDKDGRMSFERNELNPLEADVIIIDEMSMVDISLMHSLLKAI 440 Query: 526 ARHNVQVLITDSGQR--TGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARL 583 +L+ D Q G G+ L M ++ R A+ + Sbjct: 441 TVGTRIILVGDVNQLPSVGPGNVLRDMIESKAFPVVMLKKIFRQASESDIIVNAHKINSG 500 Query: 584 AGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRS 643 + + + +++ +R ++ V + L Sbjct: 501 EHITLDNKSKDFFLLKRDDVNVIISVIISLVRDKMPKY-------VNASVYDIQVLTPMR 553 Query: 644 RYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWS 703 + + R V++Q+ S Sbjct: 554 KGELGVERLNQVLQQYLN--------------------------------PSSQEKKEKE 581 Query: 704 LFRPEKMPVADGERLRVTGKIPG----------------LRVSGGDRLQVASVS--EDAM 745 F +G+++ V GD + ++ + + Sbjct: 582 HFGG---IFREGDKVMQVKNNYQIAWETKSRYGITIDSGTGVFNGDTGVIKEINLFAEEL 638 Query: 746 TVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQ---MAMDNATL 802 TV E + S L+L A V + + N Sbjct: 639 TVEFD---EGRLVTYPFSQLEELELAYAVTIHKSQGSEYPAVVLPIYSGPRMLFNRNLLY 695 Query: 803 NGLARSGRDVRLYSSLD 819 + R+ + V + S + Sbjct: 696 TAVTRAKQCVTIVGSDN 712 >UniRef50_A3ZP08 Putative uncharacterized protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZP08_9PLAN Length = 697 Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats. Identities = 127/672 (18%), Positives = 245/672 (36%), Gaps = 85/672 (12%) Query: 859 ALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLL 918 + A+ A+ + L+TEA E+ + Sbjct: 104 RPSPGERSAVDHAVEHSFVRDAVVPERKLMTEALKRGLGAVTVDRTEQELKRR------- 156 Query: 919 YVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATR 978 + ++ + +R E I+ EG+ PL + + GQ+AA R Sbjct: 157 PLIRSQVDDRDMATTREMLALESKIVSFAREGRGRCRPLGDPKRPLTRDWFNEGQQAAVR 216 Query: 979 MILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM--RSA 1036 +L + DR +++G AG GKTT + + A+ VV L + +A E+ + A Sbjct: 217 HVLGSRDRVMMIRGVAGTGKTTLEQEIGEALAE----TGKPVVALAQSVKASREVLRQEA 272 Query: 1037 GV-DAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAV 1095 G +A T+A FL D ++Q + N + L+DE+S +G DM + + + R + Sbjct: 273 GFAEADTVARFLKDAEMQASA------KNGVILVDEASQLGTRDMHAVFTVAESVNARVL 326 Query: 1096 ASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGL 1155 GD Q +++ G+P +L + R+ VA + EI+RQ + ++ L V A L Sbjct: 327 LVGDRRQHKSVTAGEPLKLLEERAGLPVAEVTEILRQQGDYKKVAEHLSEGRVGPAFDEL 386 Query: 1156 ESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRD 1215 + + + + + S + +++ + Sbjct: 387 DKLGWIRQVADDQRYQELASAYLAAINEQDRHG--------------------------- 419 Query: 1216 YTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELR 1275 R+ L+V+ + + + I +G L E+ V +A++ D + + Sbjct: 420 -------KRKTALVVSPTHAEASRVTDAIRKSLHASGLLQ-EERTVTTYVSAHLTDAQKQ 471 Query: 1276 RLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPD 1335 + +E + G +K L+ + P +A+ +Y Sbjct: 472 DATEYELGDLIQFHQN-----APGFTKGTRLVVDET--------PPPTDLADRFEVYRAK 518 Query: 1336 TIRVGTGDRMRFTK----SDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAE 1391 + + GDR+R T D + +++TV + G + Sbjct: 519 PLALAVGDRIRITAGGKTKDGKHRLSNGALFTVEGFTA------HGDLCVNNDWIIDHDF 572 Query: 1392 QHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQ 1451 H+ Y T+H +QGA+ +E +AYVA++R K+ ++TD+ Sbjct: 573 GHLAHGYVTTSHASQGATVNKVFVAIDSES--MKATDQRTAYVAVTRGKEQAVIFTDDHL 630 Query: 1452 GWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDS 1511 A A + +A ++ EPKP+ + AE + R R+V + + Sbjct: 631 DLLKAAARADKSLSAMELAEPKPETKPTPAEVFANRRRR-----GARSVSSEYSPIVPSA 685 Query: 1512 PARFIAPGRKYP 1523 P R + Sbjct: 686 PERPTREPDRAR 697 Score = 247 bits (629), Expect = 4e-63, Method: Composition-based stats. Identities = 105/673 (15%), Positives = 215/673 (31%), Gaps = 101/673 (15%) Query: 203 KLKEQVEALGYETEVVGKHGMWEMPGVPVE---AFSGRSQTIREAVGEDASLKSRDVAAL 259 +L +++ LG+ V K +E+ G+P + FS R++ I + E + A L Sbjct: 2 RLANRLQELGFSV--VRKRDDFEIAGMPQDILGRFSRRTERIEQIAQEKGITDADRKAEL 59 Query: 260 D--TRKSK-QHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDV 316 TR+ K +++ EW L D A + + + Sbjct: 60 GAETRERKGKNLSLAALQKEWRSRLTRDEQDWIAEVHRREAKPVRPSPGERS-------- 111 Query: 317 QQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDRE 376 AV A+ R ++ + ++R + R + + Sbjct: 112 --AVDHAVEHSFVRDAVVPERKLMTEALKR-GLGAVTVDRTEQELKR---RPLIRSQVDD 165 Query: 377 KGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPR---TAGYSDAVSVLAQDRPSL 433 + + T+ + E + + +R+ + R P++ + R G AV + R + Sbjct: 166 RDMATTREMLALESKIVSFAREGRGRCRPLGDPKRPLTRDWFNEGQQAAVRHVLGSRDRV 225 Query: 434 AIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQM-NMKQDERL-SGELITGRR 491 ++ G G G+ E+ E G+ V +A ++ ++Q+ + + Sbjct: 226 MMIRGVAG-TGKTTLEQEIGEALAETGKPVVALAQSVKASREVLRQEAGFAEADTVARFL 284 Query: 492 QLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTG---TGSALM 548 + E A ++VD+ +L ++ + A N +VL+ ++ G L Sbjct: 285 KDAEMQASAKNGVILVDEASQLGTRDMHAVFTVAESVNARVLLVGDRRQHKSVTAGEPLK 344 Query: 549 AMKDAGVNTYRWQGGEQRPA-------------------------TIISEPDRNVRYARL 583 +++ R I + + RY L Sbjct: 345 LLEERAGLPVAEVTEILRQQGDYKKVAEHLSEGRVGPAFDELDKLGWIRQVADDQRYQEL 404 Query: 584 AGDFAASVKAGEE------SVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPV 637 A + A++ + ++ E + +T AIR L G+L E T+T Sbjct: 405 ASAYLAAINEQDRHGKRKTALVVSPTHAEASRVTDAIRKSLHASGLL-QEERTVTTYVSA 463 Query: 638 WLDSRSRYLRDMYRPGMVMEQWNP--ETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRI 695 L + Y G +++ R V+D Sbjct: 464 HLTDAQKQDATEYELGDLIQFHQNAPGFTKGTRLVVDE------------------TPPP 505 Query: 696 SSLDSSWSLFRPEKMPVADGERLRVTG----KIPGLRVSGGDRLQVASVSEDAMTVVVPG 751 + L + ++R + + +A G+R+R+T K R+S G V + V Sbjct: 506 TDLADRFEVYRAKPLALAVGDRIRITAGGKTKDGKHRLSNGALFTVEGFTAHGDLCVNND 565 Query: 752 RAEPATLPVSDSPFTALKLENGWVETPGHSVSDSA-TVFASVTQMAM----DNATLNGLA 806 L +G+V T S + VF ++ +M + Sbjct: 566 WIIDH---------DFGHLAHGYVTTSHASQGATVNKVFVAIDSESMKATDQRTAYVAVT 616 Query: 807 RSGRDVRLYSSLD 819 R +++ Sbjct: 617 RGKEQAVIFTDDH 629 >UniRef50_B1MAE8 TraA/ATP-dependent exoDNAse/relaxase n=9 Tax=Mycobacterium RepID=B1MAE8_MYCA9 Length = 1110 Score = 279 bits (712), Expect = 8e-73, Method: Composition-based stats. Identities = 161/855 (18%), Positives = 281/855 (32%), Gaps = 86/855 (10%) Query: 10 AGSAGNYYTDKDN----YYVLGSMGERWAGRGAEQLGLQGS-VDKDVFTRLLE-GRLPDG 63 G G YY++ + ++ G RG G G D D TR L+ G P G Sbjct: 33 GGGLGEYYSESETRLPVWFSAGRDTTA--ARGLTGAGRAGENADLDAVTRWLDDGESPCG 90 Query: 64 ADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGD---KRLIDAHNQAVDFAVRQVEAL 120 A Q + H GYDLTF APKSVS+M LG D K + DAH A+ A+ + Sbjct: 91 ASGRAFQKRAGVH--GYDLTFCAPKSVSLMRGLGNDVTVKAVADAHAFAITEAMEYLAEH 148 Query: 121 ASTRVMTD---GQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANV-TQHNGEWKTLS 176 + + G+ + V +V A F H+TSR +P LHTH +V N + +G +L Sbjct: 149 GGYTRVHNPRTGEKDLVRLPGIVAAGFQHETSRAGDPHLHTHVLVPNRQARADGRLVSLD 208 Query: 177 SDKVGKTGFIENVYANQIAFGRLYREKLKEQV-EALGYETEVVGKH-GMWEMPGV---PV 231 ++Y A G +Y+ L+ ++ ++G E V H GM ++ G + Sbjct: 209 G---------TSLYHEAKAAGIIYQATLRRELTRSIGVEWNDVDPHTGMADIAGADRGDL 259 Query: 232 EAFSGRSQTIREAVGEDASLKSRDV-AALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRA 290 ++S RS +RE ++ ++ AA K + + W D R Sbjct: 260 RSWSTRSTQLREWASGHLRVECDELSAAQLATAQKATRPRKPEGVAWASLRVAWADDTRT 319 Query: 291 YRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPE 350 +R + R V++AV+ + RK FT D++ +P + Sbjct: 320 FRVDETVQQAARDARRAAGVDYAEVVRRAVSHGL-----RKAAFTRADLIEAIGARMPVD 374 Query: 351 NGV-------IERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQN 403 + IER G+ I E+ +T+ V +E ++ + + + Sbjct: 375 DADGPSPREVIERLADGVALRIGDERAAHQREGSIRYTAADLVAEERAIIEVM--GRRHS 432 Query: 404 RVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREV 463 + + + + AV+ +A + +S G AG+ + L A + G+ V Sbjct: 433 AAVLPSVDTAGLSPDQARAVTAIATSERLVQPLSAPAG-AGKTHSLRALRAAAHDAGKRV 491 Query: 464 QIIAADRRSQMN-MKQDERLSGELITGRRQLLEGMA--FTPGSTVIVDQGEKLSLKETLT 520 + A R+ +++ G + LE + V+VD+ + + Sbjct: 492 LVAAPTGRAVDVAVREQAGDHGATLDALLGRLERGQEVLDADTVVVVDEAGMVGTQHLRR 551 Query: 521 LLDGAARHNVQVLITDSGQRTGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRY 580 LL+ A +V++ + + V W QR + + D + R Sbjct: 552 LLERATAAGTKVVLVGDEHQLAPVAQRGGTFAQLVTDLPW---AQRLSQVWRMHDHDERN 608 Query: 581 ARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLD 640 A LA G ++ + G + L + + + + A + Sbjct: 609 ASLA-----VRDGGPAALRRAVGWYRRH-------DRLHIGDQVTMADDAVAAWTADVAA 656 Query: 641 SRS-RYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLD 699 R + D + + R D I + Sbjct: 657 GRDGLLIADRWEMADALNIRIHSERISDDAPTVAAARGHRVAAGDVVITRQNTTDIPTRT 716 Query: 700 SSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLP 759 + P+ +G+R V P RL + Sbjct: 717 DR----GADADPIRNGQRWEVLAVDPDAGRIAARRL----------------DDRAVAVL 756 Query: 760 VSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLD 819 D L V+ + A + GL R + Sbjct: 757 SGDYLRQYTHLGYAVTVHAAQGVTADTCHTLLSAEAATRSIAYVGLTRGRHTNTVRLYDT 816 Query: 820 ETRTAEKLARHPSFT 834 A+ P T Sbjct: 817 RAGEADHEHADPIAT 831 Score = 142 bits (358), Expect = 9e-32, Method: Composition-based stats. Identities = 82/531 (15%), Positives = 152/531 (28%), Gaps = 59/531 (11%) Query: 820 ETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKK 879 R E +A ++ +T + +++ A + A + + A+ +K Sbjct: 297 RPRKPEGVAWASLRVAWADDTRTFRVDETVQQAARDARRAAGVDYAEVVRRAVSH-GLRK 355 Query: 880 LAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTG----LLVSRA 935 AF+ DL+ + E+ ++ G L + + + Sbjct: 356 AAFTRADLIEAIGARMPVDDADGPSPREVIERLADGVALRIGDERAAHQREGSIRYTAAD 415 Query: 936 SYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAG 995 E++I+ + +P L+ Q A I + + AG Sbjct: 416 LVAEERAIIEVM-----GRRHSAAVLPSVDTAGLSPDQARAVTAIATSERLVQPLSAPAG 470 Query: 996 VGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM--RSAGVDAQTLASFLHDTQLQ 1053 GKT RA+ +A RV+ PT RAV AG TL + L + Sbjct: 471 AGKTHSLRALRAA----AHDAGKRVLVAAPTGRAVDVAVREQAGDHGATLDALLGRLE-- 524 Query: 1054 QRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFR 1113 G+ ++T+ ++DE+ MVG + R A G + V GD QL +A Sbjct: 525 --RGQEVLDADTVVVVDEAGMVGTQHLRRLLERATAAGTKVVLVGDEHQLAPVAQRGGTF 582 Query: 1114 LQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPE 1173 Q + ++ R + AL Sbjct: 583 AQLVTDLPWAQRLSQVWRMHDHDERNASLAVRDGGPAALRR------------------- 623 Query: 1174 HSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHL 1233 A +T+ + V +T R+ ++ Sbjct: 624 ----------------AVGWYRRHDRLHIGDQVTMADDAVAAWTADVAAGRDGL-LIADR 666 Query: 1234 NEDRRVLNSMIHDVREKAGE---LGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLV 1290 E LN IH R V + R + + DA + Sbjct: 667 WEMADALNIRIHSERISDDAPTVAAARGHRVAAGDVVITRQNTTDIPTRTDRGADADPIR 726 Query: 1291 DNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGT 1341 + + + D G I + + + + + + L T+ Sbjct: 727 NGQRWEVLAVDPDAGRIAARRLDDRAVAVLSGDYLRQYTHLGYAVTVHAAQ 777 Score = 71.2 bits (172), Expect = 4e-10, Method: Composition-based stats. Identities = 78/620 (12%), Positives = 140/620 (22%), Gaps = 31/620 (5%) Query: 1139 AVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKG 1198 AV + L ++ Q +L E A K Sbjct: 504 AVREQAGDHGATLDALLGRLERGQEVLDADTVVVVDEAGMVGTQHLRRLLERATAAGTKV 563 Query: 1199 EAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQ 1258 D A + ++ + G + Sbjct: 564 VLVGDEHQLAPVAQRGGTFAQLVTDLPWAQRLSQVWRMHDHDERNASLAVRDGGPAALRR 623 Query: 1259 VMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDD-GLITLQDAEGNTR 1317 + + G+ ++ + + + + ++ Sbjct: 624 AVGWYRRHDRLHIGDQVTMADDAVAAWTADVAAGRDGLLIADRWEMADALNIRIHSERIS 683 Query: 1318 LISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERG---YVANSVWTVTAVSGD--SV 1372 +P A A G + D + T++DR W V AV D + Sbjct: 684 DDAPTVAAARGHRVAAGDVVITRQNTTDIPTRTDRGADADPIRNGQRWEVLAVDPDAGRI 743 Query: 1373 TLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESA 1432 + Q+ L YA+T H AQG + L E A Sbjct: 744 AARRLDDRAVAVLSGDYLRQYTHLGYAVTVHAAQGVTADTCHTLLSAEAA-----TRSIA 798 Query: 1433 YVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELR 1492 YV L+R + V + + +A T + A R R+ R Sbjct: 799 YVGLTRGRHTNTVRLYDTRAGEADHEHADPIATGVHTARRGTPAQAATALRSV-LGRDDR 857 Query: 1493 DVAAGRAVLRQAGLAGGDSP----ARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTT 1548 A + L + R + + A DR+ ++ L + Sbjct: 858 AATITAAAADEDRLPDQVADLRRHHRTVTARLRREHRIDRHAAHDRSAHASDRALVEVLA 917 Query: 1549 DDGNGLRGFSGEGRVKGSGDAQFVALQGSRNGESLLADNM-QDGVRIARDNPDSGVVVRI 1607 Q S L+ + R PD VR Sbjct: 918 ATHRYGTPLPSSQ-------------QRSDPVAVALSAPYVVTTLAADRYTPDLADTVRQ 964 Query: 1608 AGEGRPWNPGAITGGRVWGDIPDNSVQPGAGNGEPVTAEVLAQRQAEEAIRRETERRADE 1667 A G I D P + + + A Sbjct: 965 AAAGTDRRYVQIAAAPSRPDQRRLDQFAERLTAHPPSPREVVVVEDAAAADPAHLAAVAT 1024 Query: 1668 IVRKMAENKPDLPDGKTEQAVREIAGQERDRAAITEREAALPEGVLREPQRVREAVREIA 1727 + + G+ R + G + + + L A + + Sbjct: 1025 ALVPARGRLLLIDSGEPGPGRRLLDGLALPWSENARPTPDVADPALAALADSHRAAADRS 1084 Query: 1728 RENLLQERLQQMERDMVRDL 1747 +L + R+ RD Sbjct: 1085 W-RILNPPHRDRGRERTRDQ 1103 >UniRef50_Q6SK28 TraA-like protein n=2 Tax=Arthrobacter aurescens RepID=Q6SK28_ARTAU Length = 1484 Score = 277 bits (707), Expect = 3e-72, Method: Composition-based stats. Identities = 151/1064 (14%), Positives = 291/1064 (27%), Gaps = 148/1064 (13%) Query: 36 RGAEQLGLQGSVDKDVFTRLLEGRLPDGADLSR-----MQDGSNRHRPGYDLTFSAPKSV 90 AE+ ++ + +F GR P + GYDLTF+ KS+ Sbjct: 139 NAAERHRIRATAGAVMFREG-HGRPPASKEELGRYITAQLRPQQNAVAGYDLTFTPVKSI 197 Query: 91 SMMAMLGGDKR---LIDAHNQAVDFAVRQVEALA-STRVMTDGQSETVLTGNLVMALFNH 146 S++ LG + DA A++ ++ +E A +TR+ T+G +++ + G L F H Sbjct: 198 SVLWALGDADTRRLVEDAQQAALNDSIEYLETHALATRLGTNGIAQSSVKGGLTATAFRH 257 Query: 147 DTSRDQEPQLHTHAVVANVTQH-NGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLK 205 SR +P LHTH VV+N Q G WK++ + ++ +A Y +++ Sbjct: 258 HDSRLGDPNLHTHVVVSNKVQDLAGNWKSIDGKLLHRS---------AVAVSEHYNTRIQ 308 Query: 206 EQVEALGYETEVV----GKHGMWEMPGVPVE---AFSGRSQTIREAVGEDASLKSRD--- 255 +E G E K + E+ VP E FS RS+ IR ++ E Sbjct: 309 AHLEDHGVRFEARTVNGSKQPVMEIASVPRELISLFSKRSEGIRTSLTELRQAYEEQHGH 368 Query: 256 ---------VAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTP 306 +A T ++ + +AE + + D A Sbjct: 369 SPDRAALIKLAQAATLDTRPDKEAPKTLAEQATMWRHEAGTLYTEDDLARITGTRTNTIR 428 Query: 307 GPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLART---VGILPPEN------------ 351 A+ G DV A + I +S+++ +T +V+A E+ Sbjct: 429 PIAA--GIDVDAAARRIIDAVSDKRSTWTAQNVMAEANRWAKEYAAEHGPVPHGTVASVV 486 Query: 352 ----------GVIERARAGIDEAISREQLIPL-DREKGLFTSGIHVLDE----------- 389 ++ + R +TS + DE Sbjct: 487 SRSLGTASVRITPDQVHGRFEALTRNAGTADFNHRTDTRYTSTKILEDENLLLRAGHKDV 546 Query: 390 ---LSVRALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQR 446 S++ + N+ EKS P G D A L++ G G G+ Sbjct: 547 IPAASMQDFDAAVAAYNQAVATGEKSHPLDTGQIDLAREFATSSKLLSVGIGAAG-TGKS 605 Query: 447 ERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPG---- 502 + + G V +A + N+ ++ P Sbjct: 606 SSMGLVRAAITHAGGRVIGLAPSAVAAANLGGQLGVAAATTDKFLHTNRYPDHDPDRGTA 665 Query: 503 ---------STVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTG---TGSALMAM 550 + VIVD+ + ++ V + ++ G AL + Sbjct: 666 AGPFRVTPGTVVIVDEAGMQGTGKLADVVRVVEAGGGLVRLIGDDRQLSAVQAGGALRLL 725 Query: 551 K----DAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAA----------------- 589 + T A + A + A Sbjct: 726 INEIGATELETIHRFTSPDEAAASLLLRTPTAHEADPFAWYKANGRIQAGNIDTVEGLAF 785 Query: 590 -----SVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSR 644 + G+ +V L++ ++ G + V + + Sbjct: 786 GLWQTRLNQGDAAVMMAPTNESSQRLSERAQAYRIQTGEVAGAGVAVQLRDGSRAWAGDH 845 Query: 645 YLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSL 704 + + +++ ++ D + +++ G + + L Sbjct: 846 IVTRSNDSELKVKRGRDVVKNGDMWTVEQAHEDGSLSVSHLDHGGKIRLPAEYVSGHVHL 905 Query: 705 FRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSP 764 A G + G + A+ S + V + L V+ Sbjct: 906 GYALTTHRAQG-----------MTRDAGIPILDAATSRENAYVAATRGRDENVLFVAVEE 954 Query: 765 FTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRD------VRLYSSL 818 + S + A+ TL R D + + Sbjct: 955 GQDRDTVLAAIAGNHSQDSSAHETLATEYDRINSPLTLADQYRYVNDEANNIRMAAMARD 1014 Query: 819 DETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESK 878 AE S+ V+ + + + A+ + Sbjct: 1015 VLGPDAEMFITAESWGAVATHLAGAEHGGWDPAGLLQTAAGQRDFDSADDQSAVLAWRLE 1074 Query: 879 KLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKG--YGTGLLVSRAS 936 K+ +LL + + +L +R Sbjct: 1075 KIMAKAPELLAQTGERPLQQLTDDQLAKLRTDAEAAARTAREAATGDGPKPAEHWTNRRH 1134 Query: 937 -----YEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRA 975 E E+ I +E ++L + Q Sbjct: 1135 GKLTDAELERRIFTTRFSAREQTSINDPAAARHAHQQLRALQDE 1178 Score = 141 bits (354), Expect = 3e-31, Method: Composition-based stats. Identities = 143/1062 (13%), Positives = 267/1062 (25%), Gaps = 129/1062 (12%) Query: 696 SSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEP 755 L ++ E L G R G + V ++ ++ Sbjct: 289 GKLLHRSAVAVSEHYNTRIQAHLEDHGVRFEARTVNGSKQPVMEIASVPRELISLFSKRS 348 Query: 756 ATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLY 815 + + +L + E GHS +A + + ++ Sbjct: 349 EGIR-----TSLTELRQAYEEQHGHSPDRAALIKLAQAATLDTRPDKEAPKTLAEQATMW 403 Query: 816 SSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVV 875 + + I+ A ++ A A+ + Sbjct: 404 RHEAG-TLYTEDDLARITGTRTNTIRPIAAGIDVDAAARRIIDAVSDKRSTWTAQNVMAE 462 Query: 876 ESK-------KLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGT 928 ++ + + S + +++ + + + T Sbjct: 463 ANRWAKEYAAEHGPVPHGTVASVVSRSLGTASVRITPDQVHGRFEALTRNAGTADFNHRT 522 Query: 929 G-LLVSRASYEAEKSILRH----------ILEGKEAVMPLMERVP-GELMEKLTSGQRAA 976 S E E +LR + + AV + V GE L +GQ Sbjct: 523 DTRYTSTKILEDENLLLRAGHKDVIPAASMQDFDAAVAAYNQAVATGEKSHPLDTGQIDL 582 Query: 977 TRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMR-S 1035 R +S +V G AG GK++ V +A+ RV+GL P+ A + Sbjct: 583 AREFATSSKLLSVGIGAAGTGKSSSMGLVRAAITHA----GGRVIGLAPSAVAAANLGGQ 638 Query: 1036 AGVDAQTLASFLHDTQLQQRS-------GETPDFSNTLFLLDESSMVGNTDMARAYALIA 1088 GV A T FLH + G T+ ++DE+ M G +A ++ Sbjct: 639 LGVAAATTDKFLHTNRYPDHDPDRGTAAGPFRVTPGTVVIVDEAGMQGTGKLADVVRVVE 698 Query: 1089 AGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDV 1148 AGGG GD QL A+ G RL A ++ I R T A L+ Sbjct: 699 AGGGLVRLIGDDRQLSAVQAGGALRLLINEIGA--TELETIHRFTSPDEAAASLLLR--- 753 Query: 1149 ERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTL 1208 + Sbjct: 754 ----------------------------------TPTAHEADPFAWYKANGRIQAGNIDT 779 Query: 1209 YEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTAN 1268 E + + +++ NE + L+ R + GE+ V V + + + Sbjct: 780 VEGLAFGLWQTRLNQGDAAVMMAPTNESSQRLSERAQAYRIQTGEVAGAGVAVQLRDGSR 839 Query: 1269 IRDGEL---RRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAV 1325 G+ R + + +V N + +DG +++ + ++ P E V Sbjct: 840 AWAGDHIVTRSNDSELKVKRGRDVVKNGDMWTVEQAHEDGSLSVSHLDHGGKIRLPAEYV 899 Query: 1326 AEGVTLYTPDTIRVGTGDRMR--FTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREI 1383 + V L T G D V + + ++ + Sbjct: 900 SGHVHLGYALTTHRAQGMTRDAGIPILDAATSRENAYVAATRGRDENVLFVAVEEGQDRD 959 Query: 1384 RPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHV 1443 A H +Q +S +A E N L + YV Sbjct: 960 TVLAAIAGNH-----------SQDSSAHETLATEYDRINSPLTLADQYRYV--------- 999 Query: 1444 QVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQ 1503 D NN A DV P + + AE + A Sbjct: 1000 ----------NDEANNIRMAAMARDVLGPDAE-MFITAESWGAVA--------------- 1033 Query: 1504 AGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGEGRV 1563 LAG + A + + D L + L Sbjct: 1034 THLAGAEHGGWDPAGLLQTAAGQRDFDSADDQSAVLAWRLEKIMAKAPELLAQTGERPLQ 1093 Query: 1564 KGSGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIAGE--GRPWNPGAITG 1621 + + D + + ++ + ++ R + Sbjct: 1094 QLTDDQLAKLRTDAEAAARTAREAATGDGPKPAEHWTNRRHGKLTDAELERRIFTTRFSA 1153 Query: 1622 GRVWGDIPDNSVQPGAGNGEPVTAEVLAQRQAEEAIRRETERRADEIVRKMAENKPDLPD 1681 + + + E + Q + RR E + + P + Sbjct: 1154 REQTSINDPAAARHAHQQLRALQDEHRIRTQQLKETRRAAEAAERGSRTQYGTSDPVIAA 1213 Query: 1682 GKTEQAVREIAGQERDRAAITEREAALPEGVLREPQRVREAV 1723 ++ P P R+ E + Sbjct: 1214 SNQRARGHDVIAARARAEERLRALTPRPVSASDAPDRLPEWL 1255 Score = 51.5 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 17/90 (18%) Query: 1 MMSIAQVRSAGSAGNYYTDK---------------DNYYVLGSMGERWAGRGAEQLGLQG 45 MMS+ V SAG+ YYT + D Y + G +W G+GA LG+ G Sbjct: 1 MMSLH-VLSAGTGYLYYTQETASGDELRAGDRQLGDYYTLKGLPPGQWLGQGAAALGVTG 59 Query: 46 SVDKDVFTRLL-EGRLPDGADLSRMQDGSN 74 +V + L +GR P+ + + + S Sbjct: 60 NVTEAQMANLFGKGRHPEYEAILQTKTASG 89 >UniRef50_UPI0000E0F58B exodeoxyribonuclease V, alpha subunit n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0F58B Length = 674 Score = 277 bits (707), Expect = 4e-72, Method: Composition-based stats. Identities = 89/601 (14%), Positives = 168/601 (27%), Gaps = 81/601 (13%) Query: 895 AAEGTGFTELGGEINAQIKR---GDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGK 951 A+ T + E+ I A I G LL +D L SR YE E+ I + I + Sbjct: 105 GAQCTSYEEIEMSIQALIAHPIHGQLLVID------KQRLFSRKVYEYEQFISQQISQKI 158 Query: 952 EAVMPLMERVPGELMEKLTSGQR----AATRMILETSDRFTVVQGYAGVGKTTQFRAVMS 1007 + + E+L A + + F ++ G G GKT + Sbjct: 159 TTSNERLNPNVKTVFEQLYPSPIKNIWQAIASVTALNQSFFIINGGPGTGKTYTVIRTL- 217 Query: 1008 AVNMLPESERPRVVGLGPTHRAVGEMRSA-----------GV----------DAQTLASF 1046 +++ +R PT +A M + G+ A T+ Sbjct: 218 LLHLAQADKRLNFALCAPTGKAAQRMSESIVNEVQHLSRQGIAPELLANIPTTASTVHRL 277 Query: 1047 LHD--TQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQ 1104 L + + + + + ++DE+SM+ M R + + R + GDT QL Sbjct: 278 LGLGYHRNYAKYHQGNPLPHDVLVIDEASMLDTRLMFRILSAVKPS-TRILLIGDTAQLP 336 Query: 1105 AIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVP 1164 ++ G + V + Q E + S + G S Sbjct: 337 SVESGNILKDVM---PVHVNQFSSTMMQWVESVSSELSSQYLTSCAEIPGENSQWNDYAA 393 Query: 1165 RQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAR 1224 H V E +++ A+ + P+ Sbjct: 394 TLLTNMRSTHHVNELANAIYQNNVNGAITALDNVITRWSTSSPKLSNLASSTLLYRPDEV 453 Query: 1225 EQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHR 1284 ++ + + N + ++ + E Sbjct: 454 DEQQVKQNFNALIKTMSDA--------------------YFKPLLSMLEPTDALALLRQF 493 Query: 1285 DALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDR 1344 L + + I GI+K + + G Sbjct: 494 RILSPIRHSAMGIEGINKAIDQLLDPSTN-----------------KSADSDRHLYHGKA 536 Query: 1345 MRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHG 1404 + T++D + G + +T + + AYA+T H Sbjct: 537 ILITQNDMQLGIYNGDSGVILRNEAQQLTAYIDRGDQAPLAISPYRIAKFQSAYAMTIHK 596 Query: 1405 AQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKG 1464 QG+ + + + + E Y ++R KQ+V T + AI + Sbjct: 597 TQGSEFDQVLIVLPSGLIHPM--SKELLYTGITRAKQYVA-VTGAAPDFVKAIYTTHARH 653 Query: 1465 T 1465 T Sbjct: 654 T 654 Score = 156 bits (394), Expect = 7e-36, Method: Composition-based stats. Identities = 72/581 (12%), Positives = 161/581 (27%), Gaps = 80/581 (13%) Query: 345 GILPPENGVIERARAGIDEAISR---EQLIPLDREKGLFTSGIHVLDELSVRALSR---- 397 + + E I I+ QL+ +D K S E + Sbjct: 102 SLTGAQCTSYEEIEMSIQALIAHPIHGQLLVID--KQRLFSRKVYEYEQFISQQISQKIT 159 Query: 398 ---DIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVM 454 + + N TV + A++ + S I++G G + L++ Sbjct: 160 TSNERLNPNVKTVFEQLYPSPIKNIWQAIASVTALNQSFFIINGGPGTGKTYTVIRTLLL 219 Query: 455 MAREQGREV--QIIAADRRSQMNMKQD----------ERLS----------GELITGRRQ 492 + + + + A ++ M + + ++ + Sbjct: 220 HLAQADKRLNFALCAPTGKAAQRMSESIVNEVQHLSRQGIAPELLANIPTTASTVHRLLG 279 Query: 493 L--------LEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGT- 543 L P +++D+ L + +L +LI D+ Q Sbjct: 280 LGYHRNYAKYHQGNPLPHDVLVIDEASMLDTRLMFRILSAVKPSTRILLIGDTAQLPSVE 339 Query: 544 -GSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLA-------GDFAASVKAGE 595 G+ L + VN + + + + + D+AA++ Sbjct: 340 SGNILKDVMPVHVNQFSSTMMQWVESVSSELSSQYLTSCAEIPGENSQWNDYAATLLTNM 399 Query: 596 ESVAQV---SGVREQAILTQAIRSE----------------LKTQGVLGLPEVTMTALSP 636 S V + Q + AI + L + +L P+ Sbjct: 400 RSTHHVNELANAIYQNNVNGAITALDNVITRWSTSSPKLSNLASSTLLYRPDEVDEQQVK 459 Query: 637 VWLDSRSRYLRDMY-RPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRI 695 ++ + + D Y +P + M + ++ I S + Q++ Sbjct: 460 QNFNALIKTMSDAYFKPLLSMLEPTDALALLRQFRILSPIRHSAMGIEGINKAIDQLLDP 519 Query: 696 SSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEP 755 S+ S+ S + G+ + +T L + GD + +T + R + Sbjct: 520 STNKSADS-----DRHLYHGKAILITQNDMQLGIYNGDSGVILRNEAQQLTAYID-RGDQ 573 Query: 756 ATLPVSDSPFTALKLENGWVETPGHSVSDSATVFA---SVTQMAMDNATLNGLARSGRDV 812 A L +S + + + G+ R+ + V Sbjct: 574 APLAISPYRIAKFQSAYAMTIHKTQGSEFDQVLIVLPSGLIHPMSKELLYTGITRAKQYV 633 Query: 813 RLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAI 853 + + + A +V E K + + E + Sbjct: 634 AVTGAAPDFVKAIYTTHARHTNIVIEPNKPCLTQITDEKRV 674 >UniRef50_Q1HG56 TraA n=1 Tax=Rhodococcus erythropolis RepID=Q1HG56_RHOER Length = 1506 Score = 277 bits (707), Expect = 4e-72, Method: Composition-based stats. Identities = 153/1000 (15%), Positives = 284/1000 (28%), Gaps = 148/1000 (14%) Query: 38 AEQLGLQGSVDKDVFTRLLEGRLPDGADL----SRMQDGSNRHRPGYDLTFSAPKSVSMM 93 AE L V +F + D +L S ++ + G+DL F+ PKSVS M Sbjct: 151 AESGALMEKVGTALFEETHQRSAQDPQELWSWISAQKNRVRQPVAGFDLVFTPPKSVSTM 210 Query: 94 AMLGGD---KRLIDAHNQAVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSR 150 L D +++ H++ V + +E A E T +V L++H SR Sbjct: 211 WALADDDLRRQIERIHHETVKDTLGWIEKEACFTRTGATSQEHQDTTGVVATLYDHYDSR 270 Query: 151 DQEPQLHTHAVVANV--TQHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQV 208 +P LHTHAV++ T+ +G+W+ L S + + G + N +L +L + Sbjct: 271 AGDPNLHTHAVLSVKVCTEKDGKWRALFSSTLHRYGVPASQRYNAAIMSKL-HTELGFGL 329 Query: 209 EALGYETEVVGKHGMWEMPGVP---VEAFSGRSQTIREAVGE---------------DAS 250 + G+ + E+ VP E FS R I + A Sbjct: 330 TE---RSTGRGRQNVVEIAEVPQQLCEMFSSRRTQIETRRDQLVAEYRQKHDRMPSAKAM 386 Query: 251 LKSRDVAALDTRKSKQHV-DPEIKMAEWMQTLKETGFDIRAYRDAAD-----QRADLRTL 304 A LDTR KQ W+ + D A A+ QR + Sbjct: 387 YALYQQANLDTRAGKQEPQTLREMQNNWITRSAQILGDDTAVGALAEQWRGVQREHAAGV 446 Query: 305 TPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPP--------------- 349 + + + + L + + T V + Sbjct: 447 REHQTMRKAGTPAEEAKRVVEHLENGRATWAITHVHSAVDANFAAVSFPDEAARAAAVKA 506 Query: 350 ----------ENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRA----- 394 E A + I + L TS + E + Sbjct: 507 VTEHVLGASVHLPAAELPPAPEALRRRDGEFILTNHGTALHTSASIITAEQFMLDATRTP 566 Query: 395 ----LSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVA 450 ++ + + + P AG + LA+ G G G+ + Sbjct: 567 TAYIAAQAGLDKVVEKIARTSDHPLNAGQRELAEHFVGSGTLLAVGVGPAG-TGKTTSMK 625 Query: 451 ELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGR------------RQLLEGMA 498 + R G EV +A + + ++ ++ + R L E + Sbjct: 626 AVTDTWRATGHEVIALAPSAVAAETLGEEIDVTAHTLATLTYPWRGLEGHEPRSLPEHIE 685 Query: 499 FTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGT---GSALMAMKDAGV 555 G+ ++VD+ S K+ + + AA V + + G AL + + Sbjct: 686 IPAGAMLLVDEASLASTKDLAAITEIAAAKGAVVRLLGDPNQLDAVETGGALRLLAE--- 742 Query: 556 NTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIR 615 + + D LA ++ GEES ++ R Sbjct: 743 ----ETNAPELTVVVRFGKDTEQAENSLA------LRHGEESSLELFYAR---------- 782 Query: 616 SELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVT 675 +G + + + M + + N ++ Y Sbjct: 783 -GWVHEGTAAEMKDAAATAYLADI-GAGKTSIVMLSTRDDVREVNLAIQA--HYRAAGTA 838 Query: 676 AQSHSLTLRDAQ----GETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSG 731 +++TL D G+ + R + + M V +G+ VT Sbjct: 839 KAGNTVTLSDELDAGVGDIVLTRKNKRRLRTKGGKRRNMFVRNGDLWTVTAVN-----EN 893 Query: 732 GDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFAS 791 G + E +T+ + +L ++ + + Sbjct: 894 GSLNLRSKTHEGTITL------------PARYVKRNTELGYAATVHRSQGITVDTS-HTT 940 Query: 792 VTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLET 851 V R + LY ++ T + H + + + Sbjct: 941 VGHSTNRPGLYVATTRGRTENHLYVPVEPGVTQDTEGMHLGSINNPASREVLEKILANDN 1000 Query: 852 AISHQKSAL-----HTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAA-------EGT 899 + + H + + + A S+ + D+L A A Sbjct: 1001 GHKAAITEIREALEHARSPERLREAYHAAHSRLRDRWLDDVLDRALPAALLATIAAENPG 1060 Query: 900 GFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEA 939 EL + RGD +G L + Sbjct: 1061 SLAELRTTLGQAHDRGDSARRIFNDALASGELHTARDVAR 1100 Score = 136 bits (341), Expect = 9e-30, Method: Composition-based stats. Identities = 78/435 (17%), Positives = 141/435 (32%), Gaps = 65/435 (14%) Query: 926 YGTGLLVSRASYEAEKSILRHIL------EGKEAVMPLMERVPGELMEKLTSGQRAATRM 979 +GT L S + AE+ +L + + ++E++ L +GQR Sbjct: 542 HGTALHTSASIITAEQFMLDATRTPTAYIAAQAGLDKVVEKIARTSDHPLNAGQRELAEH 601 Query: 980 ILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM-RSAGV 1038 + + V G AG GKTT +AV + V+ L P+ A + V Sbjct: 602 FVGSGTLLAVGVGPAGTGKTTSMKAVTDT----WRATGHEVIALAPSAVAAETLGEEIDV 657 Query: 1039 DAQTLASF------LHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGG 1092 A TLA+ L + + + + L+DE+S+ D+A + AA G Sbjct: 658 TAHTLATLTYPWRGLEGHEPRSLPEHIEIPAGAMLLVDEASLASTKDLAAITEIAAAKGA 717 Query: 1093 RAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERAL 1152 GD +QL A+ G RL + A + +VR + +A SL R E + Sbjct: 718 VVRLLGDPNQLDAVETGGALRLLAEETNAP--ELTVVVRFGKDTEQAENSLALRHGEES- 774 Query: 1153 SGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAI 1212 + + +G + +A Sbjct: 775 -------------------------------------SLELFYARGWVHEGTAAEMKDAA 797 Query: 1213 VRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKE------QVMVPVLNT 1266 Y A + ++++ +D R +N I AG + + Sbjct: 798 ATAYLADI-GAGKTSIVMLSTRDDVREVNLAIQAHYRAAGTAKAGNTVTLSDELDAGVGD 856 Query: 1267 ANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVA 1326 + RRL T R + + + + ++ ++G + L+ + P V Sbjct: 857 IVLTRKNKRRLRTKGGKRRNMFVRNGDLWTVTAVN-ENGSLNLRSKTHEGTITLPARYVK 915 Query: 1327 EGVTLYTPDTIRVGT 1341 L T+ Sbjct: 916 RNTELGYAATVHRSQ 930 Score = 86.2 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 67/386 (17%), Positives = 113/386 (29%), Gaps = 41/386 (10%) Query: 1356 YVANSVWTVTAVSGD-SVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAI 1414 +WTVTAV+ + S+ L I +++ +L YA T H +QG + + Sbjct: 879 VRNGDLWTVTAVNENGSLNLRSKTHEGTITLPARYVKRNTELGYAATVHRSQGITVDTSH 938 Query: 1415 ALEGTEGNRKLMAGFESAYVALSRMKQHVQVYT--------DNRQGWTDAINNAVQKGTA 1466 G NR YVA +R + +Y D +INN + Sbjct: 939 TTVGHSTNRPG------LYVATTRGRTENHLYVPVEPGVTQDTEGMHLGSINNPASR--- 989 Query: 1467 HDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPARFIAP--GRKYPQ 1524 +V E + + + L + + A R++ R P Sbjct: 990 -EVLEKILANDNGHKAAITEIREALEHARSPERLREAYHAAHSRLRDRWLDDVLDRALPA 1048 Query: 1525 PYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGEGRVKGSGDAQFVALQGSRNGESLL 1584 +A A + G A + D R + L +R+ +L Sbjct: 1049 ALLATIAAENPGSLAELRTTLGQAHDRGDSA------RRIFNDALASGELHTARDVARVL 1102 Query: 1585 ADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPGAITGGRVWGDIPDNSVQPGAGNGEPVT 1644 + + + A + + D+ + A Sbjct: 1103 NSRIIEATQAAAEAATERADTALPPLPPRTTST--------DKELDDYARIVADRYATAR 1154 Query: 1645 AEVLAQRQAEEAIRRETERRADEIVRKMAENKPDLPDGKTEQAVREIAGQERDRAAITER 1704 E IRR E R + ++P + E A R ++ R R Sbjct: 1155 PEHERTDGIGATIRRYDETRVQ--LDTTRIHRPVREAFEPEIAERILSEAGVQRLGRHLR 1212 Query: 1705 EAA----LPEGVLREPQRVREAVREI 1726 +AA PE VL + A E Sbjct: 1213 KAALAGIAPEAVLSWHAQQLAARGED 1238 >UniRef50_C5EA62 ATP-dependent exoDNAse n=2 Tax=Bifidobacterium longum subsp. infantis RepID=C5EA62_BIFLO Length = 1308 Score = 277 bits (707), Expect = 4e-72, Method: Composition-based stats. Identities = 142/1065 (13%), Positives = 279/1065 (26%), Gaps = 191/1065 (17%) Query: 20 KDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLL-----EGRLPDGADLS-----RM 69 Y G+ RW G + LG G + + E R P+ R Sbjct: 74 AAYYNAEGNPPGRWIGSASRLLG--GETGRQAGAETVRMLINERRNPETGRSLDQAGIRA 131 Query: 70 QDGSNRHRPGYDLTFSAPKSVSMMAMLGGD---KRLIDAHNQAVDFAVRQVEALASTRVM 126 + GYDLT + PKSVS++ + + + +QA D + EA + Sbjct: 132 DNDGQPPIAGYDLTQTVPKSVSILWAFADQDTRRAIDECLHQAADMTIGYFEAEYAATRA 191 Query: 127 TDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH--NGEWKTLSSDKVGKTG 184 G + + F+H SRD +P HTH V++N + +G+W L V Sbjct: 192 GAGGVASTACDGVAGFAFDHWDSRDGDPHPHTHLVISNRVRRTTDGQWTALDGRAVYGAT 251 Query: 185 FIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMW-------EMPGVPVE---AF 234 + Y + L + LG+ + E+ GVP E AF Sbjct: 252 VELSEYNANLVKDLL--------TQRLGWAWHEPARARGRGTRAVAGEVQGVPEELIDAF 303 Query: 235 SGRSQTIREAV---------------GEDASLKSRDVAALDTRKSKQHVDP--EIKMAEW 277 SGR + I + G + L+TRK K P W Sbjct: 304 SGRDREIETRLAAIIDEEERRTGHTIGWKRRAELHKQVWLETRKPKTDARPGLAELTRRW 363 Query: 278 MQTLKET--GFDIRAYRDAADQRADL----------------RTLTPGPASQDGPDVQQA 319 L+ G I A A D D + ++++ Sbjct: 364 HGKLRAEAPGTSIDAMWQAVDSHRDRTIELGQTASRAAGIRLAGQLADHQTPGRTELERL 423 Query: 320 VTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIER--------ARAGIDEAIS----- 366 A+A + +T +++ A +L A I + Sbjct: 424 ADAAMAHTERTRATWTLSNIRAEAERLLADIRLDPTARADTANQVAELAIRRCVKITPTR 483 Query: 367 ---------------REQLIPLDREKGLFTSGIHVLDELSVRALSRD--------IMKQN 403 + D +TS + E V A Sbjct: 484 YRAGQAGDDPALVSRAGRSTFDDPTLDRYTSQTILDMEKRVMATFGRTDPLAWGPGEGTR 543 Query: 404 RVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGRE- 462 + + + A + L ++ + + + G G G+ + + + Sbjct: 544 LIQSMRAGGNRLSDDQAKAAAYLLENPHAASALIGPAG-TGKTTTMRAVARAWETRHGRG 602 Query: 463 -VQIIAADRRSQMNMKQDERLSGELITGRR------------------------------ 491 V + R++ + + I Sbjct: 603 SVLGLTLSVRARDELADSIGTNAITIARLLDNVSERHRAQIDDLRREYRCRLAAARTPAE 662 Query: 492 ------------QLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQ 539 + PG VIVD+ + E + + R ++++T Sbjct: 663 RDRIRRAISESDAREQAGLIHPGQLVIVDEAGMVGTPELDAIAELCERAGARLVLTGDPM 722 Query: 540 RTGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVA 599 + +A + +R ++ +A A ++ Sbjct: 723 QLDAPAAPGGLLAWAEREHRCAT----LTSLWRFRSDPGLWANDPDGGRARWADEGKATL 778 Query: 600 QVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQW 659 ++ ++A K V + + L + M ++ Sbjct: 779 RLRAGGDRA----------KPDSVEACRRLVAEYAAHHRLHWGEDRECEEEAYRMTLQWQ 828 Query: 660 NPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLR 719 + + + T+ E +V+ +S D S + + + G+R+ Sbjct: 829 KTGKTTLLVAGTNEQVRAMNQRTIL----ERRVLGLSDGDPSRLATLSDGLKIGAGDRIV 884 Query: 720 VTGKIPG------LRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENG 773 R+ G V + DA+ T+P + + Sbjct: 885 SRANDHQVRGPDGHRIENGMAFTVTRIDTDAI-ACRDADGRQWTIPRDWAKTNC-EAGYA 942 Query: 774 WVETPGHSVS-DSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPS 832 ++ D N R + L + + +T + A Sbjct: 943 TTIHKSQGMTVDRCAAMFPSDARVPCNLQYVAATRGREENHLLYACKDEKTRQTEAMLSG 1002 Query: 833 FTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAK 892 E + + + + +S+ LL E Sbjct: 1003 SDT------------DPEAIARQRMLSTLLTRPDTRTATETRINEHEERYSLTRLLRE-H 1049 Query: 893 SFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASY 937 +AA L ++ G + + + + + ++ Sbjct: 1050 DYAAGLIAGPHLEAKLRQCHNPGIVSMITRSPNWEWLRALWSRAW 1094 Score = 143 bits (359), Expect = 8e-32, Method: Composition-based stats. Identities = 149/1064 (14%), Positives = 282/1064 (26%), Gaps = 135/1064 (12%) Query: 735 LQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQ 794 +V V E+ + E T + + + V+ + Sbjct: 290 GEVQGVPEELIDAFSGRDREIETRLAAIIDEEERRTGH--TIGWKRRAELHKQVWLETRK 347 Query: 795 MAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAIS 854 D +L + T S + ++ A + Sbjct: 348 PKTDARPGLAELTRRWHGKLRAEAPGTSIDAMWQAVDSHRDRTIELGQTASRAAGIRLAG 407 Query: 855 HQKSALHT---PAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQ 911 ++ A+ E + +++ ++ EA+ A+ + Q Sbjct: 408 QLADHQTPGRTELERLADAAMAHTERTRATWTLSNIRAEAERLLADIRLDPTARADTANQ 467 Query: 912 IKRGDLLY-------------------------VDVAKGYGTGLLVSRASYEAEKSILRH 946 + + S+ + EK ++ Sbjct: 468 VAELAIRRCVKITPTRYRAGQAGDDPALVSRAGRSTFDDPTLDRYTSQTILDMEKRVMAT 527 Query: 947 ILEGKEAVMPLME-----RVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQ 1001 E + +L+ Q A +LE + + G AG GKTT Sbjct: 528 FGRTDPLAWGPGEGTRLIQSMRAGGNRLSDDQAKAAAYLLENPHAASALIGPAGTGKTTT 587 Query: 1002 FRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA-GVDAQTLASFLHDTQLQQRSGETP 1060 RAV A R V+GL + RA E+ + G +A T+A L + + R+ Sbjct: 588 MRAVARAWET--RHGRGSVLGLTLSVRARDELADSIGTNAITIARLLDNVSERHRAQIDD 645 Query: 1061 DF------------------------------------SNTLFLLDESSMVGNTDMARAY 1084 L ++DE+ MVG ++ Sbjct: 646 LRREYRCRLAAARTPAERDRIRRAISESDAREQAGLIHPGQLVIVDEAGMVGTPELDAIA 705 Query: 1085 ALIAAGGGRAVASGDTDQL-QAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSL 1143 L G R V +GD QL APG + A + + R + Sbjct: 706 ELCERAGARLVLTGDPMQLDAPAAPGGLLAWAEREHR--CATLTSLWRFRSDP----GLW 759 Query: 1144 INRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPD 1203 N + K + R G A SV A + E + Sbjct: 760 ANDPDGGRARWADEGKATLRLRAGGDRAKPDSVEACRRLVAEYAAHHRLHWGEDRECEEE 819 Query: 1204 VPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPV 1263 + + + TL+V NE R +N R G + + Sbjct: 820 AYRMTLQ---------WQKTGKTTLLVAGTNEQVRAMNQRTILERRVLGLSDGDPSRLAT 870 Query: 1264 LNTANIRDGELRRLSTWETHR----DALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLI 1319 L+ R +S H+ D + + + + I D I +DA+G I Sbjct: 871 LSDGLKIGAGDRIVSRANDHQVRGPDGHRIENGMAFTVTRIDTD--AIACRDADGRQWTI 928 Query: 1320 SPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQ 1379 PR+ TI G + DR + + V + G++ Sbjct: 929 -PRDWAKTNCEAGYATTIHKSQGMTV-----DRCAAMFPSDAR--VPCNLQYVAATRGRE 980 Query: 1380 TREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRM 1439 + + + L G++ + + +A L+R Sbjct: 981 ENHLLYACKDE-----------------KTRQTEAMLSGSDTDPEAIARQRMLSTLLTRP 1023 Query: 1440 KQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAE-RLFSTARELRDVAAGR 1498 D R IN ++ + + + A L + R+ + Sbjct: 1024 --------DTRTATETRINEHEERYSLTRLLREHDYAAGLIAGPHLEAKLRQCHNPGIVS 1075 Query: 1499 AVLRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGK-SAGIWLNPLTTDDGNGLRGF 1557 + R A + P+ +A+ + D + K G +P G G Sbjct: 1076 MITRSPNWEW--LRALWSRAWMTDPKRAMAIVSRDISPKDEHGNRQDPAAVMAGRLSSGL 1133 Query: 1558 SGEGRVKGSGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPG 1617 D + + + A ++ + + + A +PW+ Sbjct: 1134 LDRLNGAVRDDWTAGIIPPIKASRNTAALDLVRQNELLITQRADALARQAATGEQPWSRT 1193 Query: 1618 AI-TGGRVWGDIPDNSVQPGAGNGEPVTAEVLAQRQAEEAIRRETERRADEIVRKMAENK 1676 + T + V + ++ R+ + + R + Sbjct: 1194 VMETARKHGDHNLLRDVAIYRDMWHIDDPDQPIGQRPPGRSGRQEQHWCNLDARITGQGS 1253 Query: 1677 PDLPDGKTEQAVREIAGQERDRAAITEREAALPEGVLREPQRVR 1720 + GKT +A R + T AA+ E + R Sbjct: 1254 GVVNPGKTRKANRNRP-ENPTPRVETPNPAAMEERNPQWKTRQE 1296 >UniRef50_B8I4C3 Exonuclease V subunit alpha n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I4C3_CLOCE Length = 813 Score = 276 bits (706), Expect = 4e-72, Method: Composition-based stats. Identities = 106/693 (15%), Positives = 203/693 (29%), Gaps = 97/693 (13%) Query: 779 GHSVSDSATVFASVTQMAMDNATLNGLAR----SGRDVRLYSSLDETRTAEKLARHPSFT 834 G S + + S + + R S + +++Y++ T A F Sbjct: 166 GISPDKARVIHDSYMENMEYQNVMIFFQRFGVSSAKAMKIYNNFKGTSIAIAEQNPYMFA 225 Query: 835 VVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSF 894 + E + + I A +++ LL Sbjct: 226 DIRGFGFKSCDEIARKLGIDPHSVFRLEAALKSV--LQTAEADGNCYLLKAKLLEMTAKA 283 Query: 895 AAEG---TGFTELGGEINAQIKRGDLLYVDVAKGYGT-GLLVSRASYEAEKSILRHILEG 950 + EL N +K G L+ + ++ + + ++ Y+ E I E Sbjct: 284 LSNPDVTVTTDELEDAYNRMLKSGSLVNITFSEDQQSFEAVYTKEMYKIEYETALAIKEI 343 Query: 951 KE--------AVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQF 1002 +V L+E L S Q+ A + + T+ ++ G AG GKTT Sbjct: 344 ARCQPDVPMFSVDKLIEEFEAMRGFNLESMQKEAVKAVFNTN--MLILTGSAGSGKTTTV 401 Query: 1003 RAVMSAVNMLPESER-PRVVGLGPTHRAVGEMRS-AGVDAQTLASFLH--DTQLQQRSGE 1058 ++ + E + + PT +A + G +A TL L + Sbjct: 402 ECMIYVLQRYFEKQEEMSFMLAAPTGKAAKRLTEITGFEAMTLHRLLQFSYENKGFFYRQ 461 Query: 1059 TPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTR 1118 + L ++DESSM+ + I+ G V GDT Q+ ++ G Sbjct: 462 GNELPYDLIVVDESSMLSIDLAHALFTAISP-GTTVVLIGDTQQIPSVGAGNVLDDMIKS 520 Query: 1119 SAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTE 1178 + I RQ + + E Sbjct: 521 GVIPTVKLNVIKRQEDGSGIIFNANRIINGE----------------------------- 551 Query: 1179 FSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRR 1238 + + +++ + V EA+ R ++T N Sbjct: 552 ----MPEIINANKDFFIVEEDDKNRVIKRTLEALNR--------------LMTGYNYTID 593 Query: 1239 VLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIA 1298 + + + G + + ++N A E++R ++ D ++ ++N Y Sbjct: 594 DVQVICPQKTSELGTYEMNKAIQEMVNPAAAGKAEVKRGNSVFRQGDKVIHLNNNYEA-- 651 Query: 1299 GISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVA 1358 T + T E I + + D E Sbjct: 652 ---------THYHKDAKTGRYIADEGS-GVFNGDIGRIIEISKIGEIDQESEDGEAAGDN 701 Query: 1359 NSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEG 1418 N+ V + + + Q + IDLAY++T H QG+ AI L Sbjct: 702 NTEEKVAVQYDEFIII-----------YQINELEEIDLAYSLTVHKMQGSQCEAAIFLCH 750 Query: 1419 TEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQ 1451 +M Y A++R K+ + + Sbjct: 751 L--RNYIMLNRNLGYTAVTRAKRMACIIGQRKA 781 Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats. Identities = 64/652 (9%), Positives = 156/652 (23%), Gaps = 125/652 (19%) Query: 255 DVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGP 314 A+ + + I GF ++ + A + G Sbjct: 199 SAKAMKIYNNFKGTSIAIAEQNPYMFADIRGFGFKSCDEIARK--------LGIDPHSVF 250 Query: 315 DVQQAVTQAIAGLS-ERKVQFTYTDVLARTVGILPPENGVI--ERARAGIDEAISREQLI 371 ++ A+ + + +L T L + + + + + L+ Sbjct: 251 RLEAALKSVLQTAEADGNCYLLKAKLLEMTAKALSNPDVTVTTDELEDAYNRMLKSGSLV 310 Query: 372 PLD--REKGLF---TSGIHVLDELSVRALSRDIMK-----------QNRVTVHPEKSVPR 415 + ++ F + E ++I + + + Sbjct: 311 NITFSEDQQSFEAVYTKEMYKIEYETALAIKEIARCQPDVPMFSVDKLIEEFEAMRGFNL 370 Query: 416 TAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAR-----EQGREVQIIAADR 470 + +AV + ++ I++G G +G+ V ++ + + ++ + A Sbjct: 371 ESMQKEAVKAVFNT--NMLILTGSAG-SGKTTTVECMIYVLQRYFEKQEEMSFMLAAPTG 427 Query: 471 RSQMNMKQDERLSGELITGRRQL--------LEGMAFTPGSTVIVDQGEKLSLKETLTLL 522 ++ + + + Q P ++VD+ LS+ L Sbjct: 428 KAAKRLTEITGFEAMTLHRLLQFSYENKGFFYRQGNELPYDLIVVDESSMLSIDLAHALF 487 Query: 523 DGAARHNVQVLITDSGQ--RTGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRY 580 + VLI D+ Q G G+ L M +GV +R R Sbjct: 488 TAISPGTTVVLIGDTQQIPSVGAGNVLDDMIKSGVIPTVKLNVIKRQEDGSGIIFNANRI 547 Query: 581 ARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLD 640 + G+ + A ++ E+ + I+ L+ L Sbjct: 548 --INGEMPEIINANKDFFIV-----EEDDKNRVIKRTLEALNRL---------------- 584 Query: 641 SRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDS 700 Y V +T Y + ++ + Sbjct: 585 ----MTGYNYTIDDVQVICPQKTSELGTY----------------EMNKAIQEMVNPAAA 624 Query: 701 SWSLFRPEKMPVADGERLRVTGKIPGL------------------RVSGGDRLQVASVSE 742 + + G+++ V GD ++ +S+ Sbjct: 625 GKAEVKRGNSVFRQGDKVIHLNNNYEATHYHKDAKTGRYIADEGSGVFNGDIGRIIEISK 684 Query: 743 DAMTVVVPGRA----------------EPATLPVSDSPFTALKLENGWVETPGHSVSDSA 786 + + + + L A Sbjct: 685 IGEIDQESEDGEAAGDNNTEEKVAVQYDEFIIIYQINELEEIDLAYSLTVHKMQGSQCEA 744 Query: 787 TVFASVTQ---MAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTV 835 +F + M N + R+ R + + + Sbjct: 745 AIFLCHLRNYIMLNRNLGYTAVTRAKRMACIIGQRKAISVMVQNVKVTQRNT 796 >UniRef50_Q70K35 Putative TraA protein n=1 Tax=Gordonia westfalica RepID=Q70K35_9ACTO Length = 2072 Score = 276 bits (706), Expect = 4e-72, Method: Composition-based stats. Identities = 129/991 (13%), Positives = 252/991 (25%), Gaps = 181/991 (18%) Query: 39 EQLGLQGSVDKDVFTRLLEGRLPDGADLSRMQDGSNRHR----PGYDLTFSAPKSVSMMA 94 + L+ + ++ FT+ D +LS +R R GYD+TFS KSVS + Sbjct: 162 TRAALRTELGRERFTKTYRRPPRDSRELSGFIAQESRRRQSAVAGYDMTFSPVKSVSALW 221 Query: 95 MLGG---DKRLIDAHNQAVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRD 151 + +++ AH QAV A+ +E A + V T L+ A F H SR Sbjct: 222 AVAPLPMAEKIEAAHRQAVADALAFIEREACLSRLGTDGIAQVDTDGLIAAAFTHRDSRA 281 Query: 152 QEPQLHTHAVVANVTQHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEA- 210 +P LHTH ++N + + + ++ ++ +Y +++ ++ Sbjct: 282 GDPDLHTHVAISNKVRV----RDAAGITRWMALDGTPLFKATVSASEVYNSRIELYLQRD 337 Query: 211 LGYETEVV-----GKHGMWEMPGVPVE---AFSGRSQTIREAVGEDAS------------ 250 LG K + E+ GV E +S R I E + E + Sbjct: 338 LGVSFSERFSADVRKRPVREIDGVSAELMARWSSRRAAIEERIDELSKQFLADHGREPTT 397 Query: 251 ---LKSRDVAALDTRKS-KQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTP 306 A LDTR++ + + W + RA D + R T Sbjct: 398 GEAFDLAQQATLDTREAKHEPRSYAEQRQAWRADARRILGGDRAISDLVHEATHPRPRTR 457 Query: 307 GPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENG----VIERARAGID 362 + I +S + ++ + A L + + A ++ Sbjct: 458 EHPEFTDELCTELAANCIENISATRARWQRPHLRAEAERQLRARDFAGITDTDELAAAVE 517 Query: 363 EAI-----------------------------SREQLIPLDREKGLFTSGIHVLDELSVR 393 + + + + + + L TS + E + Sbjct: 518 RIVDTALAADTSVAVSSDALDGDLNEPEVLRRANGESVFVRHDVALHTSTDILAAEHRIV 577 Query: 394 ALSRDIMKQN--------RVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQ 445 A ++ + + AG + V LA + +V G G+ Sbjct: 578 AAAKRTDGRRLDETTVDIALLEQAANGRELNAGQAAMVRELATSGRRVQLVLAPAG-TGK 636 Query: 446 RERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGM-------- 497 + L + G + +A + ++ + + + QL Sbjct: 637 TTAMRTLARAWTDSGGTLIGLAPTAAAAAVLRDELDTTTDTAAKLVQLATAERELAQTRA 696 Query: 498 -----------------------------------------AFTPGSTVIVDQGEKLSLK 516 P + V+VD+ S Sbjct: 697 LAATPRWRTIGKPELANKVAAAKKTLADPTYQNLTLPDWYTQIGPDTLVVVDEAGMASTS 756 Query: 517 ETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDR 576 + ++ A V + Q+ + SA ++D + G + ++ D Sbjct: 757 DLDEVIRCVAARGGSVRLVGDDQQLASISAGGVLRD-----VAHETGALTLSQVVRFSDA 811 Query: 577 NVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSP 636 A LA +R + S Sbjct: 812 AEGAASLA-----------------------------LRDGDPAALGFYADHGRIHVESD 842 Query: 637 VWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRIS 696 + + D +I ++L R + Sbjct: 843 AAAADDAYRAWA-----------RDRAQGRDTVMIAATRDTVNALNERARADRLAAIDPH 891 Query: 697 SLDSSWSLFRPEKMPVADGERLRVTGKIPGLR------VSGGDRLQVASVSEDAMTVVVP 750 L + + + G+ + LR V GDR +V + D Sbjct: 892 LHGPELRL--SDGLSASVGDIISTRSNRRDLRVSATDWVRNGDRWRVTHIGADGTLTAQH 949 Query: 751 GRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGR 810 +D L ++ + + R Sbjct: 950 LDLNRHVQLPADYVAEHTTLGYASTIHAAQGMTADTC-HVIGSDALDRQLLYVAMTRGRH 1008 Query: 811 DVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHL 870 +Y ET + + + Sbjct: 1009 GNHIYLPTTETDPHNATTPKARHPQTGLETLAAILGRDGAQQSATTAQRDAVDPFLRLSR 1068 Query: 871 ALPVVESKKLAFSMVDLLTEAKSFAAEGTGF 901 A + A + L +A Sbjct: 1069 AAAAYDHALGAAAEHTLGAKALRDLEHDADA 1099 Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 98/723 (13%), Positives = 180/723 (24%), Gaps = 76/723 (10%) Query: 552 DAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILT 611 ++ + Q +R + + ++ +A + E + L Sbjct: 186 SRELSGFIAQESRRRQSAVAGYDMTFSPVKSVSALWAVAPLPMAEKIEAAHRQAVADALA 245 Query: 612 QAIRSE-LKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYV 670 R L G G+ +V L R D V R D Sbjct: 246 FIEREACLSRLGTDGIAQVDTDGLIAAAFTHRDSRAGDPDLHTHVAISNKVRVR--DAAG 303 Query: 671 IDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVS 730 I R A + + V +S L+ + V+ ER + +R Sbjct: 304 ITRWMALDGTPLF-----KATVSASEVYNSRIELYLQRDLGVSFSERFSADVRKRPVREI 358 Query: 731 GGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFA 790 G ++ + + R + + + ++ A Sbjct: 359 DGVSAELM-ARWSSRRAAIEERIDELSKQFLADHGREPTTGEAFDLAQQATLDTRE---A 414 Query: 791 SVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLE 850 + A + R + ++ + R + + + Sbjct: 415 KHEPRSYAEQRQAWRADARRILGGDRAISDLVHEATHPRPRTREHPEFTDELCTELAANC 474 Query: 851 TAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINA 910 A + + D L A + + +++ Sbjct: 475 IENISATRARWQRPHLRAEAERQLRARDFAGITDTDELAAAVERIVDTALAADTSVAVSS 534 Query: 911 QIKRGDLLYVDVAKG---------YGTGLLVSRASYEAEKSILRHI-----LEGKEAVMP 956 GDL +V + + L S AE I+ E + Sbjct: 535 DALDGDLNEPEVLRRANGESVFVRHDVALHTSTDILAAEHRIVAAAKRTDGRRLDETTVD 594 Query: 957 LMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESE 1016 + +L +GQ A R + + R +V AG GKTT R + A Sbjct: 595 IALLEQAANGRELNAGQAAMVRELATSGRRVQLVLAPAGTGKTTAMRTLARA----WTDS 650 Query: 1017 RPRVVGLGPTHRAVGEMR-SAGVDAQTLASFLHDTQLQQRSGETPDF------------- 1062 ++GL PT A +R T A + ++ +T Sbjct: 651 GGTLIGLAPTAAAAAVLRDELDTTTDTAAKLVQLATAERELAQTRALAATPRWRTIGKPE 710 Query: 1063 ------------------------------SNTLFLLDESSMVGNTDMARAYALIAAGGG 1092 +TL ++DE+ M +D+ +AA GG Sbjct: 711 LANKVAAAKKTLADPTYQNLTLPDWYTQIGPDTLVVVDEAGMASTSDLDEVIRCVAARGG 770 Query: 1093 RAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERAL 1152 GD QL +I+ G R + A + ++VR + A + AL Sbjct: 771 SVRLVGDDQQLASISAGGVLRDVAHETGALT--LSQVVRFSDAAEGAASLALRDGDPAAL 828 Query: 1153 SGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAI 1212 V A + +Q AI Sbjct: 829 GFYADHGRIHVESDAAAADDAYRAWARDRAQGRDTVMIAATRDTVNALNERARADRLAAI 888 Query: 1213 VRD 1215 Sbjct: 889 DPH 891 Score = 99.3 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 54/417 (12%), Positives = 103/417 (24%), Gaps = 51/417 (12%) Query: 1339 VGTGDRMRFTKSDRERGYVANSVWTVTAV-SGDSVTLSDGQQTREIRPGQEQAEQHIDLA 1397 + T R + W VT + + ++T R ++ + +H L Sbjct: 911 ISTRSNRRDLRVSATDWVRNGDRWRVTHIGADGTLTAQHLDLNRHVQLPADYVAEHTTLG 970 Query: 1398 YAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAI 1457 YA T H AQG + + + YVA++R + +Y + Sbjct: 971 YASTIHAAQGMTADTCHVIGSDA------LDRQLLYVAMTRGRHGNHIYLPTTETDPHNA 1024 Query: 1458 NNAVQK--GTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPARF 1515 + T + R+ + + A G + Sbjct: 1025 TTPKARHPQTGLETLAAILGRDGAQQSATTAQRDAVDPFLRLSRAAAAYDHALGAAAEHT 1084 Query: 1516 IAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGEGRVKGSGDAQFVALQ 1575 + + A + L + G + L Sbjct: 1085 LGAKALRDLEHDA---------------DALYSTHTGTPAGTLTACAAWPTLRTHLATLA 1129 Query: 1576 -GSRNGESLLADNMQDGVRIARDNPDSGVVVRIA--------GEGRPWNPGA-------- 1618 G + + L + +P + + R+ G PW P Sbjct: 1130 LGGDDPIARLQAAITHRELATAADPAAVLDWRLDPTQQHSAGGGPLPWLPRVPAGFDDPQ 1189 Query: 1619 ----ITGGRVWGDIPDNSVQPGAGNGEPVTAEVLAQRQAEEAIRRETERRADEIVRKMA- 1673 +T +V A + TA + A+ R E A+ V + A Sbjct: 1190 WAPYLTRRDALVTDLAAAVTERATAWDATTAPMWARPLLLADPDRGRELVAELAVFRAAR 1249 Query: 1674 -----ENKPDLPDGKTEQAVREIAGQERDRAAITEREAALPEGVLREPQRVREAVRE 1725 + +P P + R A A+ A + + Sbjct: 1250 GVDDTDRRPAGPRPDSIALARRHAALTERADALITTTAEAARYADLARDLDPHLLAD 1306 >UniRef50_Q9ETQ3 Conjugal transfer protein n=5 Tax=cellular organisms RepID=Q9ETQ3_COREQ Length = 1367 Score = 276 bits (706), Expect = 5e-72, Method: Composition-based stats. Identities = 125/870 (14%), Positives = 250/870 (28%), Gaps = 121/870 (13%) Query: 74 NRHRPGYDLTFSAPKSVSMMAMLGGD---KRLIDAHNQAVDFAVRQVEALASTRVMTDGQ 130 + GYDL F+ KS+S++ LG + + +AH QAVD A+ +E G Sbjct: 124 RQPVAGYDLVFTPVKSISLLWGLGDAQVKEAVEEAHKQAVDEALAWIEDEVIYTRRGAGG 183 Query: 131 SETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDKVGKTGFIENVY 190 + V L++A F+H +R +P LHTH+ + N G+W T+ +Y Sbjct: 184 ARKVKAEGLLIARFDHFDNRVGDPNLHTHSAILNRVLAEGKWTTIDGQV---------LY 234 Query: 191 ANQIAFGRLYREKLKEQV-EALGYETEVV-----GKHGMWEMPGVPV---EAFSGRSQTI 241 +A Y ++ + V LG GK ++E+ G+PV E FS R I Sbjct: 235 KANVAASERYNTRVADLVARKLGVTFAPRPDTAVGKQPVYEVEGIPVGLLEEFS-RRAQI 293 Query: 242 REAVGEDA---------------SLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGF 286 + E A A LDTR +K ++ + Sbjct: 294 EDRQAELAREYKDKYGKNPPKKVQYAQAQQATLDTRNAKNPPRSLAELRAEWRERASAIL 353 Query: 287 DIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGI 346 D+ R P + P + Q VT ++ F+ + R + Sbjct: 354 AGSDPSTLVDEVQSGRDRRPAFYAPQLPALVQEVTDDLSRKVGSWTVFSLQAEIQRRLRE 413 Query: 347 --LPPENGVIERARAGIDEAISR------------------------EQLIPLDREKGLF 380 E V E +D A+ +++ +DR + + Sbjct: 414 FSFAGEMDVNEYVSDAVDLAVRDYCLPTFTEVYDAPESVSERVERGLRRMVDVDRAEMRY 473 Query: 381 TSGIHVLDELSVRAL---------SRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRP 431 T+ + E +R + ++++ + + V + Sbjct: 474 TAQAVLDAEEFMRDNAEIDDEHTVAERVIRRQIRRAEKKAGHTLGSDQIAMVEHFLTAKK 533 Query: 432 SLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRR 491 +A+ G GA + + +V + R+ + ++ + G I Sbjct: 534 KVAVAVGAAGAGKTTAA-TVIARAWEDTNGKVVALGPSARAAEVLGEEISVEGRTIADVL 592 Query: 492 QLLE---GMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTG---TGS 545 G ++VD+ S ++ L A V + Q+ G Sbjct: 593 TRARVGIPTGIDSGDLLLVDEAGMASARDLADLTRIATEAGAVVRLLGDPQQLASVEAGG 652 Query: 546 ALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVR 605 L + + + Q + A A D+ + + Sbjct: 653 VLRDLAERTDAPFLEQVHRFKTEGEAEASLLLRSGAGNALDWYERRDRIRDGM------- 705 Query: 606 EQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRS 665 + L + + + + + + + G V Sbjct: 706 -RHELPDMVFDAYVADVEADKVALMVAPTNDLVRELNIKAAAYYRANGTV--------TG 756 Query: 666 HDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIP 725 + D + A + + VV+ + + + + V++ G+ Sbjct: 757 PGVVLADGLEAAVGDVVVTRKNNSKYVVKDADGQRAGRVKNGDLWTVSE------IGEDG 810 Query: 726 GLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDS 785 LR+ +VS+ +TV + L ++ Sbjct: 811 SLRLRN-------NVSDGEVTVAADYITDNVQL------------GYATTVHRSQGMTVG 851 Query: 786 ATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAG 845 + + M + + R +Y++ DE + R + + Sbjct: 852 SCHVLAAANMD-RQSLYVAMTRGKNTNIVYAANDELPDWDFEHRPDEHPAAIDLLNKIVA 910 Query: 846 ETSLETAISHQKSALHTPAQQAIHLALPVV 875 + + A L Sbjct: 911 RDGSQRTVHQMIEDEQRQAASWDRLRSTHN 940 Score = 164 bits (415), Expect = 3e-38, Method: Composition-based stats. Identities = 143/1013 (14%), Positives = 257/1013 (25%), Gaps = 153/1013 (15%) Query: 769 KLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGL-ARSGRDVRLYSSLDETRTAEKL 827 +L + + G + + N + + Sbjct: 299 ELAREYKDKYGKNPPKKVQYAQAQQATLDTRNAKNPPRSLAELRAEWRERASAILAGSDP 358 Query: 828 ARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKL------- 880 + + L + L +L ++L Sbjct: 359 STLVDEVQSGRDRRPAFYAPQLPALVQEVTDDLSRKVGSWTVFSLQAEIQRRLREFSFAG 418 Query: 881 AFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAK----GYGTGLLVSRAS 936 + + +++A A +A + + + + ++A Sbjct: 419 EMDVNEYVSDAVDLAVRDYCLPTFTEVYDAPESVSERVERGLRRMVDVDRAEMRYTAQAV 478 Query: 937 YEAEKSILRHILEGKEA------VMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVV 990 +AE+ + + E + + R + L S Q A L + V Sbjct: 479 LDAEEFMRDNAEIDDEHTVAERVIRRQIRRAEKKAGHTLGSDQIAMVEHFLTAKKKVAVA 538 Query: 991 QGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM-RSAGVDAQTLASFLHD 1049 G AG + + E +VV LGP+ RA + V+ +T+A L Sbjct: 539 VGAAGA----GKTTAATVIARAWEDTNGKVVALGPSARAAEVLGEEISVEGRTIADVLTR 594 Query: 1050 TQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPG 1109 ++ +G S L L+DE+ M D+A + G GD QL ++ G Sbjct: 595 ARVGIPTG---IDSGDLLLVDEAGMASARDLADLTRIATEAGAVVRLLGDPQQLASVEAG 651 Query: 1110 QPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGA 1169 R R+ A ++++ R E L+ AL E + Sbjct: 652 GVLRDLAERTDAPF--LEQVHRFKTEGEAEASLLLRSGAGNALDWYERRDRIR------- 702 Query: 1170 WAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLI 1229 ++P +++A V D + L+ Sbjct: 703 ----------------------------DGMRHELPDMVFDAYVADVEAD-----KVALM 729 Query: 1230 VTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVL 1289 V N+ R LN G + V++ A+ + + + + V+ Sbjct: 730 VAPTNDLVRELNIKAAAYYRANGTVTGPGVVL-----ADGLEAAVGDVVVTRKNNSKYVV 784 Query: 1290 VDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTK 1349 D R + D + E Sbjct: 785 KDADGQRAGRVKNGDLWTVSEIGE------------------------------------ 808 Query: 1350 SDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGAS 1409 D N V+ D +T ++ L YA T H +QG + Sbjct: 809 -DGSLRLRNNVSDGEVTVAADYIT------------------DNVQLGYATTVHRSQGMT 849 Query: 1410 ETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAI--NNAVQKGTAH 1467 L + +S YVA++R K VY N D + + A Sbjct: 850 VGSCHVLAAANMD------RQSLYVAMTRGKNTNIVYAAN-DELPDWDFEHRPDEHPAAI 902 Query: 1468 DVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPARFIAPGRKYPQPYV 1527 D+ R+ E R A+ + LA G + Sbjct: 903 DLLNKIVARDGSQRTVHQMIEDEQRQAASWDRLRSTHNLAVGALYENLTENL----LGEI 958 Query: 1528 ALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGEGRVKGSGDAQFVALQGSRNGESLLADN 1587 G W + + G DA + GE L Sbjct: 959 LTERQFSWVHQLGGWDKIVEIVAQSE---TFGWDSRALLTDAAGAMRAAGKAGE--LDSE 1013 Query: 1588 MQDGVRIARDNPDSGVVVRIAGEGRPWNPGAITGGRVWGDIPDNSVQPGAGNGEPVTAEV 1647 + R+ D + + A+ G + Sbjct: 1014 NRAPGRVMADALQAATSRENSTPLPRTRTDAVAGYS--VPALSEAAAETDPILAAYVQSQ 1071 Query: 1648 LAQRQAEEAIRRETERRADEIVRKMAENKPDLPDGKT---EQAVREIA-GQERDRAAITE 1703 Q A T A+ A P K E+AVRE+A + ++ A E Sbjct: 1072 QQQMHAFVDAY-TTAAIAENAAWVTAMGDPGTDSRKIAMWEKAVREVALSRVKNSAPADE 1130 Query: 1704 REAALPEGVLREPQRVREAVREIARENLLQERLQQMERDMVRDLQKEKTLGGD 1756 + R Q R R + ++ + K G+ Sbjct: 1131 ADPVAYLTATRAEQITRVIGRVQSAPARRSPYADHTAAELAAARESSKRRIGE 1183 >UniRef50_Q2LTC7 Exodeoxyribonuclease V alpha chain n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LTC7_SYNAS Length = 670 Score = 276 bits (706), Expect = 5e-72, Method: Composition-based stats. Identities = 85/586 (14%), Positives = 166/586 (28%), Gaps = 100/586 (17%) Query: 926 YGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLT--------------- 970 L + E +++R I R + L+ Sbjct: 128 DDKSRLYLYRYWSYEDTLVRFIKSCGNPAESEDFRKISNVSLDLSGLGHNLQTFFPEDAG 187 Query: 971 -------------SGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESER 1017 Q+ A +L +R V+ G G GKTT ++ + +L + Sbjct: 188 QFRFEDDKSKIFPDWQKIAALAVL--RNRLVVISGSPGTGKTTTAARALALLQILSRGPK 245 Query: 1018 PRVVGLGPTHRAVGEMRSA--------GV-----DAQTLASFLH--DTQLQQRSGETPDF 1062 R+ PT +A + A G+ A T+ L R G Sbjct: 246 LRIALAAPTGKAAVRLDEAMNSAYARVGLNDQQGKAMTVHRLLGTVAGSPYFRHGPGNPL 305 Query: 1063 SNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAAD 1122 + ++DE+SMV MA+ ++ R + GD DQL ++ G A Sbjct: 306 PYDVIVVDEASMVDLPLMAKLVQALSPA-SRLILLGDRDQLASVEAGAVLGDLCGPDDAG 364 Query: 1123 VAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHS 1182 + RQ + E L + VP + + V + Sbjct: 365 NFF-SQAFRQ---------EIRRMTGESCLPPVPFRHLPPVPFRHLPPVSDSMVQLQKNY 414 Query: 1183 QEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNS 1242 + + + Q R ++ + + LN R Sbjct: 415 RFDENSGIGQ------------------------LSRAVNRGDKDRVFSILNSSRC---- 446 Query: 1243 MIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISK 1302 ++ E + P+ I E + + + ++ DN + Sbjct: 447 ---------SDIAWENLPDPLGLPRLI---EENLIHYFRKYMQMVINNDNPEVIFDYFER 494 Query: 1303 DDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVW 1362 L L+ ++ + R G + ++D G V Sbjct: 495 FRILCALRRGPFGVVYVNALLESMLRSERLIAGSGRWYPGRPIMINRNDYSLGLFNGDVG 554 Query: 1363 -TVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEG 1421 T+ G +++ R + YA+T H +QG+ + + Sbjct: 555 LTLPEHGGSGLSVFFRDSEGNFRRFAPFRLPEHETVYAMTVHKSQGSEFDEVLMILSD-- 612 Query: 1422 NRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAH 1467 + E Y +SR K+ + ++ AI+ +++ + Sbjct: 613 RDSPLLTRELIYTGVSRAKKGLLLW-GREDIIRQAISRRIKRTSGL 657 Score = 139 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 56/456 (12%), Positives = 125/456 (27%), Gaps = 64/456 (14%) Query: 421 DAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGR----EVQIIAADRRSQMNM 476 ++ LA R L ++SG G G+ A + + + R + + A ++ + + Sbjct: 203 QKIAALAVLRNRLVVISGSPG-TGKTTTAARALALLQILSRGPKLRIALAAPTGKAAVRL 261 Query: 477 KQ------------DERLSGELITGRRQ--------LLEGMAFTPGSTVIVDQGEKLSLK 516 + D++ + P ++VD+ + L Sbjct: 262 DEAMNSAYARVGLNDQQGKAMTVHRLLGTVAGSPYFRHGPGNPLPYDVIVVDEASMVDLP 321 Query: 517 ETLTLLDGAARHNVQVLITDSGQR--TGTGSALMAM---KDAG-------VNTYRWQGGE 564 L+ + + +L+ D Q G+ L + DAG R GE Sbjct: 322 LMAKLVQALSPASRLILLGDRDQLASVEAGAVLGDLCGPDDAGNFFSQAFRQEIRRMTGE 381 Query: 565 QRPATIISE----------PDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAI 614 + P + +L ++ +G +++ ++ + + Sbjct: 382 SCLPPVPFRHLPPVPFRHLPPVSDSMVQLQKNYRFDENSGIGQLSRAVNRGDKDRVFSIL 441 Query: 615 RSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRV 674 S + + + P + L +R M M N Y Sbjct: 442 NSSRCSD--IAWENLPDPLGLPRLI---EENLIHYFRKYMQMVINNDNPEVIFDY----- 491 Query: 675 TAQSHSLTLRDAQGETQVVRISSLDSSWSLFRP---EKMPVADGERLRVTGKIPGLRVSG 731 + + +G VV +++L S G + + L + Sbjct: 492 -FERFRILCALRRGPFGVVYVNALLESMLRSERLIAGSGRWYPGRPIMINRNDYSLGLFN 550 Query: 732 GDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFAS 791 GD + V +E + + + Sbjct: 551 GDVGLTLPEHGGSGLSVFFRDSEGNFRRFAPFRLPEHETVYAMTVHKSQGSEFDEVLMIL 610 Query: 792 ---VTQMAMDNATLNGLARSGRDVRLYSSLDETRTA 824 + + G++R+ + + L+ D R A Sbjct: 611 SDRDSPLLTRELIYTGVSRAKKGLLLWGREDIIRQA 646 >UniRef50_C2AI56 TrwC relaxase n=1 Tax=Tsukamurella paurometabola DSM 20162 RepID=C2AI56_TSUPA Length = 948 Score = 274 bits (699), Expect = 3e-71, Method: Composition-based stats. Identities = 117/785 (14%), Positives = 223/785 (28%), Gaps = 160/785 (20%) Query: 67 SRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKR---LIDAHNQAVDFAVRQVEALAST 123 ++ + + GYDLTF+ KSVS+M L + + AH AV A+ +E A Sbjct: 173 AKEKGKVRQPVAGYDLTFTPVKSVSVMWALADPETRAKIETAHQAAVGDALSWLEDNAVF 232 Query: 124 RVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ-HNGEWKTLSSDKVGK 182 + + T L +A F+H +R +P LHTH V+N +G W ++S Sbjct: 233 TKRGARGEQQLSTAGLTVAQFDHYDTRAGDPNLHTHCAVSNKVLGSDGRWGAINSLPF-- 290 Query: 183 TGFIENVYANQIAFGRLYREKLKEQVE-ALGYETEV----VGKHGMWEMPGVP---VEAF 234 + N +A + Y L E + LG E GK + E+ G+ ++ F Sbjct: 291 -------FNNAVAASQRYNAVLAETLRAELGVEFVARQVGRGKQPIMEIAGIDTALLDGF 343 Query: 235 SGRSQTIREAV---------------GEDASLKSRDVAALDTRK-----SKQHVDPEIKM 274 S R +R G+ A A L+TR+ + ++ Sbjct: 344 STRRAQVRARHEQLLAQYIADHGHTPGKHAEYALFQQATLETREGKDVGPEGSGSLGKQL 403 Query: 275 AEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDV--------QQAVTQAIAG 326 W + + Q S D A + + Sbjct: 404 TAWQSKARALAPEQAQGEQLLAQCRIAGREALAAISNDPDAAPDRAWHGPAAAAEEVLHK 463 Query: 327 LSERKVQFTYTDVLAR-----TVGILPPENGVIERARAGIDEAIS--------------- 366 + E++ + T + +LP + E ++ A++ Sbjct: 464 VCEQRSVWRETHLRTAAEAIIAAKLLPSGSDRRELVDTVVERALAESMIVGPGHELLDTT 523 Query: 367 -----------REQLIPLDREKGLFTSGIHVLDELSVRALSRD---------IMKQNRVT 406 + + + L TS V E ++ + ++ + Sbjct: 524 TGEIPERLRRDNGEHVLTNPGGPLLTSSRIVDAENTILDAAATPTAHVATNAVIDAGIAS 583 Query: 407 VHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQ------- 459 V + P AG ++ V +A G G G+ + V Sbjct: 584 VEENEPFPLNAGQAELVRHFCGSGALVAAGVGPAG-TGKTTSMKATVAAWTADANRLPGA 642 Query: 460 --GREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMA-----FTPGSTV------- 505 R+V +A + + + L+G I M T + Sbjct: 643 AVNRQVIPLAPSAVAATKLGDEIELTGNTIDSFTYWWTAMGGRETYLTAHQVLADPDAGF 702 Query: 506 -------------------IVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGT--- 543 +VD+ S + ++D A + V + Sbjct: 703 LARRDARDALKRCPTGAMYLVDEAGMASTRNLAIMVDIAEQTGGVVRFLGDPYQLDAVTT 762 Query: 544 GSALMAMKDA----GVNTYRW---------------------QGGEQRPATIISEPDRNV 578 G A + A + ++ Sbjct: 763 GGAFAMLARATDAPELTDVVRFGTDTQQAENSLALRAGDEAALDLYEQRGWTHHHNTAGE 822 Query: 579 RYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQG--VLGLPEVTMTALSP 636 + A +G S+ S E A + I++ ++ G G L+ Sbjct: 823 AIDEMVAAHLADTASGRNSIVLASTREEVAAINAQIQAHHRSGGRAQAGRTVDLSDGLAA 882 Query: 637 VWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRIS 696 D D + ++ N + D + ++++ + G + S Sbjct: 883 GVGDRIVTRDNDSDYRQIGGKRANSRVLNGDLWNVEKIHSDGSLTARHIEDGGRIHLPAS 942 Query: 697 SLDSS 701 L ++ Sbjct: 943 YLTAN 947 Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats. Identities = 89/576 (15%), Positives = 161/576 (27%), Gaps = 86/576 (14%) Query: 791 SVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLE 850 ++ L R L + ++ A A H E + + S+ Sbjct: 412 ALAPEQAQGEQLLAQCRIAGREALAAISNDPDAAPDRAWHGPAAAAEEVLHKVCEQRSVW 471 Query: 851 TAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINA 910 + +A A + + E L E+ GEI Sbjct: 472 RETHLRTAAEAIIAAKLLPSGSDRRELVDTVVERA--LAESMIVGPGHELLDTTTGEIPE 529 Query: 911 QIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHIL------EGKEAVMPLMERVPGE 964 +++R + V G LL S +AE +IL + + V Sbjct: 530 RLRRDN--GEHVLTNPGGPLLTSSRIVDAENTILDAAATPTAHVATNAVIDAGIASVEEN 587 Query: 965 LMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLP-----ESERPR 1019 L +GQ R + G AG GKTT +A ++A + + Sbjct: 588 EPFPLNAGQAELVRHFCGSGALVAAGVGPAGTGKTTSMKATVAAWTADANRLPGAAVNRQ 647 Query: 1020 VVGLGPTHRAVGEMRSA-------------------GVDAQ-TLASFLHDTQLQQRSGET 1059 V+ L P+ A ++ G + T L D + Sbjct: 648 VIPLAPSAVAATKLGDEIELTGNTIDSFTYWWTAMGGRETYLTAHQVLADPDAGFLARRD 707 Query: 1060 PDFS------NTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFR 1113 + ++L+DE+ M ++A + GG GD QL A+ G F Sbjct: 708 ARDALKRCPTGAMYLVDEAGMASTRNLAIMVDIAEQTGGVVRFLGDPYQLDAVTTGGAFA 767 Query: 1114 LQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPE 1173 + + A + ++VR + ++A SL R + A L + Sbjct: 768 MLARATDAP--ELTDVVRFGTDTQQAENSLALRAGDEAALDLYEQRG------------- 812 Query: 1174 HSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHL 1233 + + +V + T R ++++ Sbjct: 813 ------------------------WTHHHNTAGEAIDEMVAAHLADTASGRN-SIVLAST 847 Query: 1234 NEDRRVLNSMIHDVREKAGELGKEQVM---VPVLNTANIRDGELRRLSTWET--HRDALV 1288 E+ +N+ I G + + + R S + + A Sbjct: 848 REEVAAINAQIQAHHRSGGRAQAGRTVDLSDGLAAGVGDRIVTRDNDSDYRQIGGKRANS 907 Query: 1289 LVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREA 1324 V N DG +T + E R+ P Sbjct: 908 RVLNGDLWNVEKIHSDGSLTARHIEDGGRIHLPASY 943 >UniRef50_A6TL79 Helicase, RecD/TraA family n=35 Tax=Bacteria RepID=A6TL79_ALKMQ Length = 754 Score = 273 bits (697), Expect = 5e-71, Method: Composition-based stats. Identities = 104/749 (13%), Positives = 208/749 (27%), Gaps = 147/749 (19%) Query: 736 QVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQM 795 + E V GRA+ T+ + L+ ++ + + + + Sbjct: 118 VIQYAPERLREVEGIGRAKAETITETFRDQKELREIILFLSEYHITPNYAVKIHKKYGDK 177 Query: 796 AMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISH 855 + N R ++ A + HP T Sbjct: 178 TIATIQENPY-RLADEIVGIGFKRADAIARNMGVHPHSKYRIHSGIKYMLNTFQ------ 230 Query: 856 QKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRG 915 V L+ A+ G ++ G I Sbjct: 231 --------------------GEGHTYAPGVKLIQRAEELLRVEEG--QVEGAIQELALNQ 268 Query: 916 DLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKE--------AVMPLMERVPGELME 967 ++ + ++ S Y AE ++ + ++ + + ++++ Sbjct: 269 EIQLERIDDEI---IVYSMPYYYAESNVCKKLISLAQVELDPIEMDIDEELQKIEQAEEM 325 Query: 968 KLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTH 1027 L Q+ A + +E + +V+ G T ++++ + E +++ PT Sbjct: 326 TLAKQQKEAIKEAIE--NGISVITGGP----GTGKTTTINSLIKVFEKLELKMLLAAPTG 379 Query: 1028 RAVGEMRSA-GVDAQTLASFLHDTQLQQRSG------ETPDFSNTLFLLDESSMVGNTDM 1080 RA M A G +++T+ L R G E + ++DE SMV M Sbjct: 380 RASKRMTEATGKESKTIHRLLELGFGDDREGMLFQRNEDNPLDCHVIIIDEVSMVDIILM 439 Query: 1081 ARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAV 1140 IA G R V GD DQL ++ G R + EI RQ E V Sbjct: 440 NSLMKSIAR-GTRVVLVGDVDQLPSVGAGNVLRDIIDSKVVKTIRLTEIFRQAQESMIVV 498 Query: 1141 YSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEA 1200 + E K ++ +V E + K + Sbjct: 499 NAHRINQGLYP-QLNEKQKDFYFMKRNAKEDVLATVVELVRDRLPKHYQFD--------- 548 Query: 1201 FPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVM 1260 +RD TP + +T G L + + Sbjct: 549 -----------ALRDIQVLTPMKKGET------------------------GTLNLNKEL 573 Query: 1261 VPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLIS 1320 LN N+ E D ++ + N Y Sbjct: 574 QAALNPPNVSKAEKDLKEKIFREGDKVMQIKNNY-------------------------- 607 Query: 1321 PREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQT 1380 T++ D M + + G + V ++ ++ L Sbjct: 608 ---------------TLKWRCLDPM--AEEQKGEGVFNGDIGYVQSIDTEAEELVILFDD 650 Query: 1381 REIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMK 1440 ++ ++LAY++T H +QG+ + + ++ Y A++R + Sbjct: 651 QKQVNYSFTQLDELELAYSVTIHKSQGSEFP--VVVIPITWGPPMLLTRNLLYTAVTRAR 708 Query: 1441 QHVQVYTDNRQGWTDAINNAV--QKGTAH 1467 V + ++N ++ + Sbjct: 709 SLVVLV-GVESYLKKMVDNNKIIERYSGL 736 Score = 175 bits (442), Expect = 2e-41, Method: Composition-based stats. Identities = 77/682 (11%), Positives = 180/682 (26%), Gaps = 86/682 (12%) Query: 213 YETEVVGKHGMWEMPGVPV-------EAFSGRS--QTIREAVGEDASLKSRDVAALDTRK 263 E + E+ G+ E F + + I + E + A+ K Sbjct: 116 LEVIQYAPERLREVEGIGRAKAETITETFRDQKELREIILFLSEYHITPNY---AVKIHK 172 Query: 264 SKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQA 323 + E +RAD G + + Sbjct: 173 KYGDKTIATIQENPYRLADE-------IVGIGFKRADAIARNMGVHPHSKYRIHSGIKYM 225 Query: 324 IAGLSERKVQFTYT-DVLARTVGILPPENGVIERARAGIDEAISREQ--LIPLDREKGLF 380 + + ++ R +L E G + I E ++ L +D E ++ Sbjct: 226 LNTFQGEGHTYAPGVKLIQRAEELLRVEEG---QVEGAIQELALNQEIQLERIDDEIIVY 282 Query: 381 TSGIHVLD----------ELSVRALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDR 430 + + + + + + + + +A+ ++ Sbjct: 283 SMPYYYAESNVCKKLISLAQVELDPIEMDIDEELQKIEQAEEMTLAKQQKEAIKEAIENG 342 Query: 431 PSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGR 490 S+ G + L+ + + ++ + A R+ M + + I Sbjct: 343 ISVITGGPGTGKT---TTINSLIKVFEKLELKMLLAAPTGRASKRMTEATGKESKTIHRL 399 Query: 491 RQL------------LEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSG 538 +L +I+D+ + + +L+ AR VL+ D Sbjct: 400 LELGFGDDREGMLFQRNEDNPLDCHVIIIDEVSMVDIILMNSLMKSIARGTRVVLVGDVD 459 Query: 539 QR--TGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEE 596 Q G G+ L + D+ V R A R + G + + ++ Sbjct: 460 QLPSVGAGNVLRDIIDSKVVKTIRLTEIFRQAQESMIVVNAHRINQ--GLYPQLNEKQKD 517 Query: 597 SVAQVSGVREQ--AILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGM 654 +E A + + +R L + L+P Sbjct: 518 FYFMKRNAKEDVLATVVELVRDRLPKHYQFDALRD-IQVLTP------------------ 558 Query: 655 VMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVAD 714 M++ T + ++ + + + + A+ + + D + + Sbjct: 559 -MKKGETGTLNLNKELQAALNPPN----VSKAEKDLKEKIFREGDKVMQIKNNYTLKWRC 613 Query: 715 GERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGW 774 + + + G V GD V S+ +A +V+ + + S + L+L Sbjct: 614 LDPM--AEEQKGEGVFNGDIGYVQSIDTEAEELVILFD-DQKQVNYSFTQLDELELAYSV 670 Query: 775 VETPGHSVSDSATVFASV---TQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHP 831 V + N + R+ V L + + Sbjct: 671 TIHKSQGSEFPVVVIPITWGPPMLLTRNLLYTAVTRARSLVVLVGVESYLKKMVDNNKII 730 Query: 832 SFTVVSEQIKTRAGETSLETAI 853 + + E ++ Sbjct: 731 ERYSGLGRRLGKYFEMQIKDET 752 >UniRef50_B2I3X3 TrwC protein n=1 Tax=Acinetobacter baumannii ACICU RepID=B2I3X3_ACIBC Length = 716 Score = 271 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 134/465 (28%), Positives = 201/465 (43%), Gaps = 42/465 (9%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSM---GERWAGRGAEQLGLQGS-VDKDVFTRLL 56 M+S+ V +G A +YY DNYY W GRGA+ LG+ G ++ ++F LL Sbjct: 1 MLSVNNVVESGKALSYY-QLDNYYTNEQQSLDQTEWYGRGAQVLGINGEQIEANIFKDLL 59 Query: 57 EGRLPDGADLSRMQDGSNR-----HRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVD 111 EGR+ D L R++ N HR G DLTFSAPKSVS+MA + ++ ++ AH AV Sbjct: 60 EGRVED-QQLGRVRKDENGQSYIDHRAGIDLTFSAPKSVSIMAEVFENQDVLQAHLDAVK 118 Query: 112 FAVRQVEAL-ASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHN- 169 + +E TR+ DG + + NLV+ALFNH+TSR +PQ HTHAVV N+T ++ Sbjct: 119 DTISAIEDHYTQTRISVDGTIQKSESDNLVVALFNHNTSRALDPQTHTHAVVMNMTLNDK 178 Query: 170 GEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGV 229 W LS+ E +Y NQ G +Y L + + A+G + EV G +E+ G Sbjct: 179 DSWTALSN---------EVIYDNQATIGSIYNSNLAQNLRAIGLDVEVKDNQGNFEIAGF 229 Query: 230 PVE---AFSGRSQTIREAVG------EDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQT 280 E FS R I E++ EDA R+ AAL TR+ KQ + W + Sbjct: 230 TPEMIQEFSQRRTQIIESLKSRGIDIEDAPASLREQAALKTRERKQAFNEAELRQVWKER 289 Query: 281 LKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAV----TQAIAGLSERKVQFTY 336 E G D+ + S+ I L ++ +F Sbjct: 290 ASELGITQSFVDKLEDKIKTNQMNADPQPSEKTKKTYGKPDPQKMIRIYHLKGKR-KFLA 348 Query: 337 TDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALS 396 +++ E ++R I + Q P + G H+ DE + Sbjct: 349 INLITLIKKHQINELTTLKRKIRAIAPLSGKSQKEPETQNMGQ---EAHIQDEGRLGKKQ 405 Query: 397 RDIMKQN---RVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSG 438 + N TV E+ R S V + + + ++ G Sbjct: 406 TEPKASNNSKDQTVPRERPYQRKNRESQQVLISQKTKEAVYYAIG 450 Score = 194 bits (491), Expect = 4e-47, Method: Composition-based stats. Identities = 76/433 (17%), Positives = 157/433 (36%), Gaps = 36/433 (8%) Query: 716 ERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWV 775 ++++ + S + M + + + L ++ Sbjct: 305 DKIKTNQMNADPQPSEKTKKTYGKPDPQKMIRIYHLKGKRKFLAINLITL--------IK 356 Query: 776 ETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTV 835 + + ++ ++ ++ + G++ + + + + Sbjct: 357 KHQINELTTLKRKIRAIAPLSGKSQKEPETQNMGQEAHIQDEGRLGKKQTEPKASNNSKD 416 Query: 836 VSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFA 895 + Q+ + ++A++ A+ +++ +L A F Sbjct: 417 QTVP----RERPYQRKNRESQQVLISQKTKEAVYYAIGHHTEREMMIPETKILNTAMKFD 472 Query: 896 AEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVM 955 + ++ E+N K ++ VD G L ++ +E L+HI +++V Sbjct: 473 IQEVTHEQVRAELNRLEKEKIIVRVD-------GKLTTQRLAHSEVWSLQHIQNEQKSVS 525 Query: 956 P---------LMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVM 1006 P +++ K T GQRA+ I + R+ V G AG GKTT Sbjct: 526 PIVDESQVKTRLDQEEQLRGRKFTPGQRASLETIFSSESRYIGVDGLAGTGKTTMLHT-- 583 Query: 1007 SAVNMLPESERPRVVGLGPTHRAVGEMR-SAGVDAQTLASF-LHDTQLQQR--SGETPDF 1062 +N + V G+ T A + G+ ++T+A F + + +LQ+ + Sbjct: 584 --LNKVASENGFIVKGMAATGVAAKNLELETGIPSKTMAMFQIKENELQKEIEKNGGVNR 641 Query: 1063 SNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAAD 1122 N ++++DESS V T+ L R V GD QLQ+I+ G+PF L Q R Sbjct: 642 KNEIWIVDESSFVSQTNFKDILTLAKQANSRVVFLGDKLQLQSISAGKPFELVQNRGVLK 701 Query: 1123 VAIMKEIVRQTPE 1135 + M +I+RQ Sbjct: 702 TSQMHDIIRQKKP 714 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 47/333 (14%), Positives = 103/333 (30%), Gaps = 29/333 (8%) Query: 260 DTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQA 319 +T+ Q + + + + + + +R R ++A Sbjct: 385 ETQNMGQEAHIQDEGRLGKKQTEPKASNNSKDQTVPRERPYQRKNRESQQVLISQKTKEA 444 Query: 320 VTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGL 379 V AI +ER++ T +L + + E+ RA ++ + ++ +D + Sbjct: 445 VYYAIGHHTEREMMIPETKILNTAMK-FDIQEVTHEQVRAELNRLEKEKIIVRVDGK--- 500 Query: 380 FTSGIHVLDELSVRALSRDIMKQNRVTVHPEK------------SVPRTAGYSDAVSVLA 427 T+ E+ ++ K V + T G ++ + Sbjct: 501 LTTQRLAHSEVWSLQHIQNEQKSVSPIVDESQVKTRLDQEEQLRGRKFTPGQRASLETIF 560 Query: 428 QDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELI 487 V G G G+ + L +A E G V+ +AA + N++ + + + + Sbjct: 561 SSESRYIGVDGLAG-TGKTTMLHTLNKVASENGFIVKGMAATGVAAKNLELETGIPSKTM 619 Query: 488 TGRRQLLEGMAF---------TPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSG 538 + + IVD+ +S +L A + N +V+ Sbjct: 620 AMFQIKENELQKEIEKNGGVNRKNEIWIVDESSFVSQTNFKDILTLAKQANSRVVFLGDK 679 Query: 539 ---QRTGTGSALMAMKDAGVNTYRWQGGEQRPA 568 Q G +++ GV R Sbjct: 680 LQLQSISAGKPFELVQNRGVLKTSQMHDIIRQK 712 >UniRef50_Q3HKI6 TraI n=2 Tax=Rhodobacteraceae RepID=Q3HKI6_RHOS4 Length = 1111 Score = 269 bits (688), Expect = 5e-70, Method: Composition-based stats. Identities = 130/650 (20%), Positives = 221/650 (34%), Gaps = 86/650 (13%) Query: 905 GGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGE 964 I +R D + L A+ E+ +L + + Sbjct: 501 AEVIERASERSDRSNGPQPQRETIRLYSDDATLALERMVLGEYRAARRQGGVELPARLRV 560 Query: 965 LM----------------EKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSA 1008 LT GQ+ A + L RF VQGYAG GKT Sbjct: 561 TGGIKMSGEALLRDRLDKTTLTEGQKEAVALGLTGRGRFVGVQGYAGTGKTHMV----ET 616 Query: 1009 VNMLPESERPRVVGLGPTHRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFL 1068 + E V G PT++A E+ SA A T+A FL + ++ + Sbjct: 617 LRRYAERAGFTVEGAAPTNKAAAELASAVPAAGTVARFLLADAPGDKKR-------SILV 669 Query: 1069 LDESSMVGNTDMARAYALIAA-GGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMK 1127 +DE+ M+ DM R + GD QL ++ G PF ++ AIM Sbjct: 670 VDEAGMISTRDMHALMTKANELRYARVILVGDVKQLDPVSAGSPFAQL-QKAGMPTAIMA 728 Query: 1128 EIVRQTPEL-REAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAK 1186 +I RQ E R+AV I +V A S +E ++ + + Sbjct: 729 DIQRQRNEDARKAVLHAIRGEVRAAFSRIEDLRTPEKNQSFTG----------------- 771 Query: 1187 LAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHD 1246 + R + G RE+T IV N R +N+ I D Sbjct: 772 ------------------------EVARAWLGLHSSVRERTGIVVLTNRVRGEVNAAIRD 807 Query: 1247 VREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLV------DNVYHRIAGI 1300 ++ LG + V V L ++ E R ++++ + + + +R+ Sbjct: 808 ELKREHRLGAQDVTVASLTPLSLTRAEAREAASYKAGDVVISVRSVEGLERDKLYRVTST 867 Query: 1301 SKDDGLITLQDAEGNTRLISPREAVAEGVTL---YTPDTIRVGTGDRMRFTKSDRERGYV 1357 ITL+ G + ++ + GD ++F +D++ G + Sbjct: 868 LPYQNSITLRPEGGGAEVALTLGHGSKAAGSLAAFEVGKREFAAGDEVKFAITDKDCGAI 927 Query: 1358 ANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALE 1417 + +T V+ + ++ + P A + +D AYA TAH QGA+ I Sbjct: 928 NGARGRITKVTEAQIDVTLHGGRKLSVPTDSLAARGLDHAYAATAHDFQGATVDRIIVGM 987 Query: 1418 GTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAV-QKGTAHDVFEPKPDR 1476 + + +S YV +SR + HV + T + D I ++ A D + + Sbjct: 988 TPDEQ---LTSQKSFYVNISRARDHVTLVTTDPGKLADRIQRETGERPAALDAYAQRLSD 1044 Query: 1477 EVMNAERLFSTA--RELRDVAAGRAVLRQAGLAGGDSPARFIAPGRKYPQ 1524 E A ++ RD +LR+ + R+ Q Sbjct: 1045 ERNAAGKVPQNEPPSPARDPDRVPQILREQAQKLRQAEPPQERTDRQVEQ 1094 Score = 266 bits (678), Expect = 7e-69, Method: Composition-based stats. Identities = 142/525 (27%), Positives = 223/525 (42%), Gaps = 62/525 (11%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSM----GERWAGRGAEQL------GLQGSVDKD 50 MMS++ V + +A YY + YYV GS W G A++L G VD Sbjct: 1 MMSVSNVSAGAAASGYY-QAEGYYVAGSPEAEAAASWFGSAADELVAMGQEEFAGRVDDA 59 Query: 51 VFTRLLEGRLP-----------DGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGD 99 F+ +L+G P +G L R+ DG +HRPG DLTFSA KSVS++ ++ GD Sbjct: 60 AFSAMLDGHAPPTQRDAEGHWKEGQTLGRVVDGERQHRPGIDLTFSASKSVSIIGLVAGD 119 Query: 100 KRLIDAHNQAVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTH 159 +R+I AH++AV A+ VE + G +V LF HDTSR +PQLHTH Sbjct: 120 ERVIAAHDEAVKAAMSYVEEKFVRTRREVNGEIVAVPGKMVAGLFRHDTSRALDPQLHTH 179 Query: 160 AVVANVTQ-HNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVV 218 AV+ N+ +G+W LS+ E +Y N++ G +YR +L + +E GY E V Sbjct: 180 AVIQNMVLGEDGKWTALSN---------EEIYRNKMLIGAIYRNELAQNLERAGYAVERV 230 Query: 219 GKHGMWEMPGVPVEA---FSGRSQTIREAVGEDA---SLKSRDVAALDTRKSKQH-VDPE 271 G G+ E+ GVP E FS R + I A+ E + +AAL TR++KQ +D Sbjct: 231 GHDGITEIKGVPRELMDGFSKRRKEIEAALDERGIERTAVDSALAALATRRNKQKGIDRA 290 Query: 272 IKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQ-------AI 324 W + + G + R+ ++DG + AI Sbjct: 291 ELREAWEKEAQSMGVSLDQLRELRQTATLTAATRLPGVTRDGIAAPSPADRAAAAVEFAI 350 Query: 325 AGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGI 384 A +SER ++ ++++ + I + I +L+P+ Sbjct: 351 AHVSERNAVYSGSELVRVALSRAKD--VGIRQIEGAIATKEETGRLVPVHVH-------- 400 Query: 385 HVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAG 444 ++ S A++R + D+ V + R V G G A Sbjct: 401 AWNEKRSPDAMTRGEGFSGTLKAMGTAPYQNDPRNRDSFFVTIETRNGEQTVWGAGLQAA 460 Query: 445 QRERVA---ELVMMAREQGREVQIIAADRR---SQMNMKQDERLS 483 + A LV + + + V +I AD + + N+ E + Sbjct: 461 LERQEASPGSLVHLTVQGQKPVTVIGADGKPVSAHRNLWTAEVIE 505 Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 89/572 (15%), Positives = 165/572 (28%), Gaps = 63/572 (11%) Query: 353 VIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQN--------- 403 E + + P L++ + E V R +Q Sbjct: 500 TAEVIERASERSDRSNGPQPQRETIRLYSDDATLALERMVLGEYRAARRQGGVELPARLR 559 Query: 404 ----------RVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELV 453 + T G +AV++ R V G G G+ V L Sbjct: 560 VTGGIKMSGEALLRDRLDKTTLTEGQKEAVALGLTGRGRFVGVQGYAG-TGKTHMVETLR 618 Query: 454 MMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGSTVIVDQGEKL 513 A G V+ A ++ + + + S ++VD+ + Sbjct: 619 RYAERAGFTVEGAAPTNKAAAELASAV-PAAGTVARFLLADAPGDKKR-SILVVDEAGMI 676 Query: 514 SLKETLTLLDGAARHN-VQVLITDSGQR---TGTGSALMAMKDAGVNT-----YRWQGGE 564 S ++ L+ A +V++ ++ GS ++ AG+ T + Q E Sbjct: 677 STRDMHALMTKANELRYARVILVGDVKQLDPVSAGSPFAQLQKAGMPTAIMADIQRQRNE 736 Query: 565 QRPATIISEPDRNVRYA------------------RLAGDFAASVKA-GEESVAQVSGVR 605 ++ VR A +A + + E + V R Sbjct: 737 DARKAVLHAIRGEVRAAFSRIEDLRTPEKNQSFTGEVARAWLGLHSSVRERTGIVVLTNR 796 Query: 606 EQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWN--PET 663 + + AIR ELK + LG +VT+ +L+P+ L Y+ G V+ Sbjct: 797 VRGEVNAAIRDELKREHRLGAQDVTVASLTPLSLTRAEAREAASYKAGDVVISVRSVEGL 856 Query: 664 RSHDRYVIDRVTAQSHSLTLRDAQGETQVV----RISSLDSSWSLFRPEKMPVADGERLR 719 Y + +S+TLR G +V S S + F K A G+ ++ Sbjct: 857 ERDKLYRVTSTLPYQNSITLRPEGGGAEVALTLGHGSKAAGSLAAFEVGKREFAAGDEVK 916 Query: 720 VTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPG 779 G R ++ V+E + V + G + L V A L++ + T Sbjct: 917 FAITDKDCGAINGARGRITKVTEAQIDVTLHGGRK---LSVPTDSLAARGLDHAYAATAH 973 Query: 780 HSVSDSA----TVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTV 835 + Q+ + ++R+ V L ++ Sbjct: 974 DFQGATVDRIIVGMTPDEQLTSQKSFYVNISRARDHVTLVTTDPGKLADRIQRETGERPA 1033 Query: 836 VSEQIKTRAGETSLETAISHQKSALHTPAQQA 867 + R + Q Sbjct: 1034 ALDAYAQRLSDERNAAGKVPQNEPPSPARDPD 1065 >UniRef50_B4VXL3 Putative uncharacterized protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VXL3_9CYAN Length = 777 Score = 269 bits (688), Expect = 6e-70, Method: Composition-based stats. Identities = 100/654 (15%), Positives = 192/654 (29%), Gaps = 123/654 (18%) Query: 853 ISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQI 912 + + Q I +L+ A + + Q+ Sbjct: 144 LGMPPDSPLRYEQGIIQTLQDARNQGHCFLPSSELIEAALGLLSCPGHTPNPR--LLNQV 201 Query: 913 KRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHIL----------EGKEAVMPLMERVP 962 L V +G + L + Y AE ++ + IL E + + +E V Sbjct: 202 LENALTQKIVVEGRLSESLYLKPIYRAEVNVAQLILYFASRSQLPIEPLKEWLQKLEAVE 261 Query: 963 GELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVG 1022 + L QR A +++ G AG GKT + +++ + R +V Sbjct: 262 WRESDLLAPEQRQALLKSYAQP--ISIITGGAGRGKTHILKYLINWLTEC----RFKVAL 315 Query: 1023 LGPTHRAVGEMRSA-GVDAQTLASFLHDTQLQ--QRSGETPDFSNTLFLLDESSMVGNTD 1079 PT +A M++A G+DAQT+ L + ++DE SMV Sbjct: 316 AAPTGKAATRMKNATGLDAQTIHRLLQWRGYGQKFEFNQDNPLPIDWLIIDEFSMVDIFL 375 Query: 1080 MARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELRE- 1138 + R V GD +QL ++ G R + +K+I RQ E Sbjct: 376 FNSLLKALEPH-TRIVLVGDHNQLPSVGAGMVLRDLLISEVVPCSRLKKIYRQPEESPII 434 Query: 1139 -AVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLK 1197 A +I V + S Q ++++ Sbjct: 435 YAAEDVIRGVVP------------------------NLQRFNSPLQWQEVSDCALLCRHT 470 Query: 1198 GEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKE 1257 EA D + L + RD ++Q +++ + G Sbjct: 471 PEAIADTIVELVAQMQRDQVNL----KDQVMVLAPQKKGV-------------VGVQALN 513 Query: 1258 QVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTR 1317 + + P+ N E+ D ++ + N Y I + +G G Sbjct: 514 KRLQPLFNPKQPEQPEVETGEVVYRVGDRVIQLKNRYDTIPAVMNGEG--------GWVI 565 Query: 1318 LISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDG 1377 + P+ A G +V Sbjct: 566 EVHPKSQPERVK-----------------------------------VAFEGGAVV---- 586 Query: 1378 QQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALS 1437 + PG + H ++ +T H AQG+ + I M + Y ++ Sbjct: 587 ----DYVPGIFEQIMH---SFCLTCHKAQGSEFQYVIMPLSPS--NHRMLSRQLLYTTMT 637 Query: 1438 RMKQHVQVYTDNRQGWTDAIN--NAVQKGTAHDVFEPKPDREVMNAERLFSTAR 1489 R + + A++ +++ T + + ++ +++A T + Sbjct: 638 RASYGGFIAVGRPETLKFAVSVDKPMRRYTQLPLLLSESEQTLIDALNQVRTMQ 691 Score = 176 bits (446), Expect = 6e-42, Method: Composition-based stats. Identities = 85/696 (12%), Positives = 172/696 (24%), Gaps = 89/696 (12%) Query: 288 IRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQF-TYTDVLARTVGI 346 I + AD L G +Q + Q + + F ++++ +G+ Sbjct: 126 INEIDGIGFKIADSLALKLGMPPDSPLRYEQGIIQTLQDARNQGHCFLPSSELIEAALGL 185 Query: 347 LPPENGVIE-RARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRV 405 L R + E ++++ R E++V L ++++ Sbjct: 186 LSCPGHTPNPRLLNQVLENALTQKIVVEGRLSESLYLKPIYRAEVNVAQLILYFASRSQL 245 Query: 406 TVHP-------------EKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAEL 452 + P +S A L + + G G+ + L Sbjct: 246 PIEPLKEWLQKLEAVEWRESDLLAPEQRQA---LLKSYAQPISIITGGAGRGKTHILKYL 302 Query: 453 VMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQL--------LEGMAFTPGST 504 + E +V + A ++ MK L + I Q P Sbjct: 303 INWLTECRFKVALAAPTGKAATRMKNATGLDAQTIHRLLQWRGYGQKFEFNQDNPLPIDW 362 Query: 505 VIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR--TGTGSALMAMKDAGVNTYRWQG 562 +I+D+ + + +LL H VL+ D Q G G L + + V Sbjct: 363 LIIDEFSMVDIFLFNSLLKALEPHTRIVLVGDHNQLPSVGAGMVLRDLLISEVVPCSRLK 422 Query: 563 GEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQG 622 R EES + IR + Sbjct: 423 KIYRQP--------------------------EESPIIYAAE-------DVIRGVVPNLQ 449 Query: 623 VLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLT 682 P L + +V + + D+ ++ + Q + Sbjct: 450 RFNSPLQWQEVSDCALLCRHTPEAIADTIVELVAQMQRDQVNLKDQVMV--LAPQKKGVV 507 Query: 683 LRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGL--RVSGGDRLQVASV 740 A + + ++ G+R+ V G+ V V Sbjct: 508 GVQALNKRLQPLFNPKQPEQPEVETGEVVYRVGDRVIQLKNRYDTIPAVMNGEGGWVIEV 567 Query: 741 SEDA----MTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVT--- 793 + + V G A + F + + Sbjct: 568 HPKSQPERVKVAFEGG---AVVDYVPGIFEQIMHSFCLTCHKAQGSEFQYVIMPLSPSNH 624 Query: 794 QMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAI 853 +M + R+ + ET P + E +L A+ Sbjct: 625 RMLSRQLLYTTMTRASYGGFIAVGRPETLKFAVSVDKPMRRYTQLPLLLSESEQTLIDAL 684 Query: 854 SHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIK 913 + ++ A P + +A + +L +A + T L ++ Sbjct: 685 NQVRTMQVP--------ASPNQQFVSVAMRLRELNIDATK--GQKTSIGSLALQLYQSHY 734 Query: 914 RGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILE 949 G +Y E + + Sbjct: 735 NRRPSKRPEVIESGQKF----KTYHYENEAIELLDR 766 >UniRef50_B1M9U8 Conjugative relaxase domain protein n=5 Tax=Alphaproteobacteria RepID=B1M9U8_METRJ Length = 981 Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats. Identities = 151/774 (19%), Positives = 257/774 (33%), Gaps = 87/774 (11%) Query: 11 GSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRLPDGADLSRMQ 70 +D YY+ G G + ++D F L G P Sbjct: 22 SQREARPDKRDEYYLSDGGGVW-WSSGGTIVRHGAAIDAASFRDLCAGLHPGTGKPLVRG 80 Query: 71 DGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQA---VDFAVRQVEALASTRVMT 127 G H G D T + KSVS++ M G ++ V+ A+ V A V T Sbjct: 81 AGPG-HWAGVDCTMTPGKSVSVLWMAGTPEQRAAIEAAHRAAVERALSFVTAEGLVTVRT 139 Query: 128 D-GQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKT-LSSDKVGKTGF 185 G +E +L++ F+H T+R+ +P +HTH V NV + T Sbjct: 140 GAGGTEQHRPRDLIVGRFDHYTTREGDPNIHTHCVFINVAGAPENAGAGRYKSRTHLTIE 199 Query: 186 IENVYANQIAFGRLYREKLKEQVEA-LGYETEVVGKHGMWEMPGVPVE---AFSGRSQTI 241 E +YA Q+ G YR L E + G + G+ G WE+ VP AFS RS+ I Sbjct: 200 PERLYAAQLGVGAAYRAALAEGLREQFGLQYREAGR-GQWEVACVPEALLAAFSKRSEQI 258 Query: 242 REAVGEDASLKSRDVAALDTRKSKQH-VDPEIKMAEWMQTLKETGFDI-RAYRDAADQRA 299 G AS R++AAL TR+ K+ A W + L D A R A Sbjct: 259 LAYAGAGASSAQREIAALATRRGKEELPTGPELEARWRKELAACAIDPWLAARHPERDPA 318 Query: 300 DLRTLTPGPASQDGPDVQQAVTQ-----AIAGLSERKVQFTYTDVLARTVGILPPENGVI 354 + + D + A + L + D+L R + + + Sbjct: 319 FVMAAERDREREAPFDPPEIPGDSPMARAASALFRHESVVARKDLLQRALEVAGVAGIGV 378 Query: 355 ERARAGIDEAISREQLIP------LDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVH 408 + A + + L+ + +TS E ++ + +++ +T Sbjct: 379 DAVEAELAQFERDGALLLLADAELVPGASACWTSPGIAACEAAMLRAADRPLERTWITPE 438 Query: 409 PEKSV-----PRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREV 463 ++ + +AV A R +A++ G G+ A LV AR G V Sbjct: 439 AVEAALADAPHLSPEQGEAVRHAA-GRDGVALLQAGAG-TGKTTTAAALVAAARGSGLRV 496 Query: 464 QIIAADRRSQMNMKQDERLSGELITGRRQLLEGMA-------------FTPGSTVIVDQG 510 +A + + + + + I RQ A + V+VD+ Sbjct: 497 IGLAPSWVAADELGRSTGIPAQAIARWRQDQTQAAGPDAIHHPDRSAVLDADTLVMVDEA 556 Query: 511 EKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMKD--------AGVNTYRWQG 562 ++ ++ +L A +V++ ++ + A++ A + R Q Sbjct: 557 GMVATRDMEAVLSAARSVGAKVVLIGDRRQLASVGGASALRAVADVVGRSAVLEQVRRQT 616 Query: 563 GEQRPATIISEP----------------------DRNVRYARLAGDFAASVKAGEESVAQ 600 E + A + + LA GE+ + Sbjct: 617 VEWQRAASVLMARGEVEAALRAYAARDRIELVAGAEAAQVRALAVWSEQRAAHGEDVLIV 676 Query: 601 VSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWN 660 + A L R+ L+ +G LG +T+ A D R + G + Sbjct: 677 TRRNADAAALNVQARAVLRGEGRLGPDLITLPAR-----DRDDRPVPLALAVGDALRFGE 731 Query: 661 P----ETRSHDRYVIDRVTAQSH---SLTLRDAQGETQVVRISSLDSSWSLFRP 707 R+ +R ++ +TA+ L L G V S L R Sbjct: 732 SLPHLGLRNGNRARVEAITAEPERGVRLRLALEDGRALEVAWSDLAQQPRFGRK 785 Score = 178 bits (451), Expect = 2e-42, Method: Composition-based stats. Identities = 126/749 (16%), Positives = 218/749 (29%), Gaps = 123/749 (16%) Query: 849 LETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKS-FAAEGTGFTELGGE 907 + P + A + + + DLL A G G + E Sbjct: 325 RDREREAPFDPPEIPGDSPMARAASALFRHESVVARKDLLQRALEVAGVAGIGVDAVEAE 384 Query: 908 INAQIKRGDLLYVDVAKG--YGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGEL 965 + + G LL + A+ + S E ++LR E E V L Sbjct: 385 LAQFERDGALLLLADAELVPGASACWTSPGIAACEAAMLRAADRPLERTWITPEAVEAAL 444 Query: 966 ME--KLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGL 1023 + L+ Q A R D ++Q AG GK +A+ RV+GL Sbjct: 445 ADAPHLSPEQGEAVRHA-AGRDGVALLQAGAGTGK----TTTAAALVAAARGSGLRVIGL 499 Query: 1024 GPTHRAVGEM-RSAGVDAQTLASFLHDTQL-------QQRSGETPDFSNTLFLLDESSMV 1075 P+ A E+ RS G+ AQ +A + D ++TL ++DE+ MV Sbjct: 500 APSWVAADELGRSTGIPAQAIARWRQDQTQAAGPDAIHHPDRSAVLDADTLVMVDEAGMV 559 Query: 1076 GNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPE 1135 DM + + G + V GD QL ++ R A+++++ RQT E Sbjct: 560 ATRDMEAVLSAARSVGAKVVLIGDRRQLASVGGASALRAVADVVG-RSAVLEQVRRQTVE 618 Query: 1136 LREAVY-SLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKA 1194 + A + +VE AL + ++ A Sbjct: 619 WQRAASVLMARGEVEAALRAYAARDRIELVAGAEAAQVRALAV----------------- 661 Query: 1195 MLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGEL 1254 ++ + E LIVT N D LN V G L Sbjct: 662 ---------------------WSEQRAAHGEDVLIVTRRNADAAALNVQARAVLRGEGRL 700 Query: 1255 GKEQVMVPVLNTANIRDG---ELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQD 1311 G + + +P + + + + L L + R+ I+ + Sbjct: 701 GPDLITLPARDRDDRPVPLALAVGDALRFGESLPHLGLRNGNRARVEAITAEPER----- 755 Query: 1312 AEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDS 1371 + G + Sbjct: 756 -----------------------------------------------GVRLRLALEDGRA 768 Query: 1372 VTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFES 1431 + ++ ++ R G++ + I AYA T + AQG + + A+ G + + Sbjct: 769 LEVAWSDLAQQPRFGRKWPQPRIVHAYAGTVYAAQGRTSSAAVMYVGAATDARE------ 822 Query: 1432 AYVALSRMKQHVQVYTD-NRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARE 1490 YV L+R + +V + +R A + A D +R A Sbjct: 823 LYVGLTRHRHEARVVVERDRLDALCRQRQADARMPATDAMV--LERLFREARTYSEKVNV 880 Query: 1491 LRDVAAGRAVLRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNG-KSAGIWLNPLTTD 1549 + A A +R L + + I R + A G + + L Sbjct: 881 VDHAADRVAFVRDGSLGTRELVGQGIDVRRMMCAARLLREAMAWLGVEQLIVPTWRLVDA 940 Query: 1550 DGNGLRGFSGEGRVKGSGDAQFVALQGSR 1578 G L G+ + Sbjct: 941 YGRRLTQAPARVTRALVGELASRLGRPDA 969 >UniRef50_C7IID4 Exonuclease V subunit alpha n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IID4_9CLOT Length = 819 Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats. Identities = 105/702 (14%), Positives = 202/702 (28%), Gaps = 103/702 (14%) Query: 778 PGHSVSDSATVFASVTQMAMDNATLNGLAR----SGRDVRLYSSLDETRTAEKLARHPSF 833 G S + + S + + + S + +++Y++ T A F Sbjct: 184 KGISADKARLIHDSYMENMEYQNVMIFFQKFGVSSAKAMKIYNTFKGTAIAIAEQNPYMF 243 Query: 834 TVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTE--- 890 T + E + + I A +++ LL Sbjct: 244 TNIKGFGFRTCDEIAKKLGIDSHSIFRMEAALKSVLETAE--TEGHCYLYRQQLLQATSK 301 Query: 891 AKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGT-GLLVSRASYEAEKSILRHILE 949 A S A+ EL IK G L+ + + + +R ++ E I Sbjct: 302 ALSDNADKISEDELDEAYKRMIKTGLLVNITYTENEDRYEAVYTRDMHKLEYETALAIKN 361 Query: 950 --------GKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQ 1001 V L+ +L Q+ + R + ET+ ++ G AG GKTT Sbjct: 362 IVRCQPDISVAHVDKLIAEFEELKGFELEDMQKESVRAVFETN--MLILTGSAGSGKTTT 419 Query: 1002 FRAVMSAVNMLPES-ERPRVVGLGPTHRAVGEMRS-AGVDAQTLASFLH--DTQLQQRSG 1057 ++ + + E+ + + PT +A + G +A T+ L Sbjct: 420 VECMIYVLQRVFENRQEMSFMLAAPTGKAAKRLTEITGFEAMTIHRLLQFSYENKGFFYR 479 Query: 1058 ETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQT 1117 + + L ++DESSM+ + I+ G V GDT QL ++ G Sbjct: 480 QGNELPYDLIVIDESSMLSIDLAHALFTAISP-GTTVVMIGDTQQLPSVGAGNVLDDMIK 538 Query: 1118 RSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVT 1177 + I RQ + + E Sbjct: 539 SGVIPTVKLNVIKRQADGSGIISNANRIINGE---------------------------- 570 Query: 1178 EFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDR 1237 + + + +++ + V EA+ R ++T N Sbjct: 571 -----MPEIINQNKDFFVIEEDDKYRVVKKTQEALNR--------------LMTAYNHTI 611 Query: 1238 RVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRI 1297 + + + G + + ++N A E++R ++ D ++ + N Y Sbjct: 612 DDIQIICPQKSSEIGTYELNKAIQEMVNPAAENKQEIKRGNSVFREGDKVIHLSNNYE-- 669 Query: 1298 AGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYV 1357 T + I + + +E Sbjct: 670 ----------TPHYRREPDTGRYFAQESCGIFNGDIGRIIEIS---------NIKEVEAE 710 Query: 1358 ANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALE 1417 T V + I + IDLAY +T H QG+ AI L Sbjct: 711 DEDANT----PEKKVAVQYDD---FIIIYHINELEEIDLAYCLTVHKMQGSQCEAAIILC 763 Query: 1418 GTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINN 1459 +M Y A++R K+ + ++ ++N Sbjct: 764 H--MRNYVMLNRNLGYTAVTRAKKMACII-GQKKAIKLMVSN 802 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 69/623 (11%), Positives = 165/623 (26%), Gaps = 72/623 (11%) Query: 255 DVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGP 314 A+ + + I GF R + A + G S Sbjct: 218 SAKAMKIYNTFKGTAIAIAEQNPYMFTNIKGFGFRTCDEIAKK--------LGIDSHSIF 269 Query: 315 DVQQAVTQAIAGL-SERKVQFTYTDVLARTVGILPPENGVI--ERARAGIDEAISREQLI 371 ++ A+ + +E +L T L I + I L+ Sbjct: 270 RMEAALKSVLETAETEGHCYLYRQQLLQATSKALSDNADKISEDELDEAYKRMIKTGLLV 329 Query: 372 PL---------------DREKGLFTSGIHVLDELSVRALSR-DIMKQNRVTVHPEKSVPR 415 + D K + + + + + + + + + K Sbjct: 330 NITYTENEDRYEAVYTRDMHKLEYETALAIKNIVRCQPDISVAHVDKLIAEFEELKGFEL 389 Query: 416 TAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMARE-----QGREVQIIAADR 470 ++V + + ++ I++G G +G+ V ++ + + Q + A Sbjct: 390 EDMQKESVRAVFET--NMLILTGSAG-SGKTTTVECMIYVLQRVFENRQEMSFMLAAPTG 446 Query: 471 RSQMNMKQDERLSGELITGRRQL--------LEGMAFTPGSTVIVDQGEKLSLKETLTLL 522 ++ + + I Q P +++D+ LS+ L Sbjct: 447 KAAKRLTEITGFEAMTIHRLLQFSYENKGFFYRQGNELPYDLIVIDESSMLSIDLAHALF 506 Query: 523 DGAARHNVQVLITDSGQR--TGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRY 580 + V+I D+ Q G G+ L M +GV +R A R Sbjct: 507 TAISPGTTVVMIGDTQQLPSVGAGNVLDDMIKSGVIPTVKLNVIKRQADGSGIISNANRI 566 Query: 581 ARLAGDFAASVKAGEESVAQVSGVREQAI-LTQAIRSELKTQGVLGLPEVTMTALSPVWL 639 + G+ + ++ + + + TQ + L T + ++ + + Sbjct: 567 --INGEMPEIINQNKDFFVIEEDDKYRVVKKTQEALNRLMTAYNHTIDDIQI-------I 617 Query: 640 DSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLD 699 + Y +++ + + + + + + Sbjct: 618 CPQKSSEIGTYELNKAIQEMVNPAAENKQEIKRGNSVFREGDKVIHLSNNYETPHYRREP 677 Query: 700 SSWSLFRPEKMPVADGE--RLRVTGKIPGLRVSGGDRLQVASVSEDAMTVV--VPGRAEP 755 + F E + +G+ R+ I V + EDA T V + + Sbjct: 678 DTGRYFAQESCGIFNGDIGRIIEISNIKE----------VEAEDEDANTPEKKVAVQYDD 727 Query: 756 ATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQ---MAMDNATLNGLARSGRDV 812 + + + L A + + M N + R+ + Sbjct: 728 FIIIYHINELEEIDLAYCLTVHKMQGSQCEAAIILCHMRNYVMLNRNLGYTAVTRAKKMA 787 Query: 813 RLYSSLDETRTAEKLARHPSFTV 835 + + + Sbjct: 788 CIIGQKKAIKLMVSNVKINERNS 810 >UniRef50_Q3AB49 Helicase, RecD/TraA family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AB49_CARHZ Length = 745 Score = 268 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 100/856 (11%), Positives = 226/856 (26%), Gaps = 173/856 (20%) Query: 643 SRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSW 702 R ++ +ID + + + + V + + Sbjct: 14 EVKYIKFSRENFIIAGAKILEGERQGEIIDILGEIINCRVGERYRVSGKFVNNPNYGLQF 73 Query: 703 SL-FRPEKMPVADGERLRVTGKIPGLRVSGGDRL-QVASVSEDAMTVVVPGR---AEPAT 757 + + + P + + + + + V D++TV++ + Sbjct: 74 QVKYYERERPNSPEQLISYLSNLGVKGIGEKTAAKIVERFGMDSLTVILKDFSQLTKIRG 133 Query: 758 LPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSS 817 + + KL+ ++ L L ++ Sbjct: 134 ISFEKAESLYQKLKEEYL-------------------FEEAFNLLAPLNLEPHQIKTLLK 174 Query: 818 LDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVES 877 E L +P + A L + L+ +++ +E Sbjct: 175 FYRESLIEHLKENPYKPIHELYGFAFAPFDKLAKDWHFPPNHLYRIKASIVYVLKEALEQ 234 Query: 878 KKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASY 937 + + ++ + + EG G L ++ ++ G++ L + Y Sbjct: 235 GHVYLPLAEVYNKGLALLGEGIGPETLDEGLSVLLRTGEVCLE-------RDRLYLKKLY 287 Query: 938 EAEKSILRH------ILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFT--- 988 +AEK++ R I + K + + V +L Q+ A ++ F Sbjct: 288 DAEKTVARKVAFLLTITDKKINIKKPLNEVEKKLGISYDPLQKEALSLMFAEKKLFILTG 347 Query: 989 --------VVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRS-AGVD 1039 V++G + ++ PT RA + G+ Sbjct: 348 GPGTGKTTVIKG------------FIELYQRFFPKN--KIALAAPTGRAAKRLSESTGMP 393 Query: 1040 AQTLASFLHDTQLQ------QRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGR 1093 A T+ L R + L ++DE SM+ A + I R Sbjct: 394 AATIHRLLEPEGETRSGELLFRYNKYEPLPYDLIIIDEVSMLDLPLAAALFEAITPE-CR 452 Query: 1094 AVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALS 1153 V GD +QL + PGQ + +K + RQ + + + +R + S Sbjct: 453 LVLVGDPNQLPPVGPGQLLKDLLAVEEIPRISLKTVFRQGED--AGIIEVAHRVLTGDWS 510 Query: 1154 GLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIV 1213 LE + L + E ++ + + + + Sbjct: 511 ELERL-----------------------LGRRILEDVFFLPAKDTENITNLLLKVVKKLW 547 Query: 1214 RDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGE 1273 +Y G +PE + LN ++ + Sbjct: 548 ENY-GYSPEDIAVLSPMRKGALGVENLNVLLQKLFNGFE-----------------TQEV 589 Query: 1274 LRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYT 1333 ++++ + + + +N G+ + + Sbjct: 590 KFFGTSFKVNDKVMQIKNNYERGEDGVFNGETGFIKK----------------------- 626 Query: 1334 PDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQH 1393 D E + + G ++ + Sbjct: 627 ------------IIKSGDEEE--------IIVSFDGKNIKYRKTD------------LEE 654 Query: 1394 IDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGW 1453 + L+YA T H AQG I + + Y A++R K+ + + Sbjct: 655 LTLSYATTVHKAQGMEYPVVILVLHN--YHYPLLKRNLLYTAVTRAKKML-IVIGTPWAL 711 Query: 1454 TDAINN--AVQKGTAH 1467 A+ N + ++ Sbjct: 712 RQAVENIKEETRYSSL 727 Score = 144 bits (362), Expect = 4e-32, Method: Composition-based stats. Identities = 73/673 (10%), Positives = 175/673 (26%), Gaps = 90/673 (13%) Query: 205 KEQVEALG---YETEVVGKHGMWEMPGVPVEAFSGRSQTI-REAVGEDAS----LKSRDV 256 + VE G + + ++ G+ E Q + E + E+A + + Sbjct: 107 AKIVERFGMDSLTVILKDFSQLTKIRGISFEKAESLYQKLKEEYLFEEAFNLLAPLNLEP 166 Query: 257 AALDTRKSKQHVDPEIKMAE--WMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGP 314 + T + E + + GF + A + Sbjct: 167 HQIKTLLKFYRESLIEHLKENPYKPIHELYGFAFAPFDKLAKDWHFPPNHLYRIKASIVY 226 Query: 315 DVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLD 374 +++A+ Q V +V + + +L E E G+ + ++ Sbjct: 227 VLKEALEQ-------GHVYLPLAEVYNKGLALL-GEGIGPETLDEGLSVLLRTGEVCLER 278 Query: 375 RE---KGLFTSGIHVLDELSVRALSRDIM---KQNRVTVHPEKSVPRTAGYSDAVSVLAQ 428 K L+ + V +++ D K+ V + + +A+S++ Sbjct: 279 DRLYLKKLYDAEKTVARKVAFLLTITDKKINIKKPLNEVEKKLGISYDPLQKEALSLMFA 338 Query: 429 DRPSLAIVSGQGGAAGQRERVAELVMMAREQ--GREVQIIAADRRSQMNMKQDERLSGEL 486 ++ + G G + + + + + ++ + A R+ + + + Sbjct: 339 EKKLFILTGGPGTG--KTTVIKGFIELYQRFFPKNKIALAAPTGRAAKRLSESTGMPAAT 396 Query: 487 ITGRRQ------------LLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLI 534 I + P +I+D+ L L L + VL+ Sbjct: 397 IHRLLEPEGETRSGELLFRYNKYEPLPYDLIIIDEVSMLDLPLAAALFEAITPECRLVLV 456 Query: 535 TDSGQR--TGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVK 592 D Q G G L + R + R L GD++ + Sbjct: 457 GDPNQLPPVGPGQLLKDLLAVEEIPRISLKTVFRQGEDAGIIEVAHRV--LTGDWSELER 514 Query: 593 ---AGEESVAQVSGVREQAILTQAIRSELKTQGVL-GLPEVTMTALSPVWLDSRSRYLRD 648 ++ +T + +K G + LSP+ R Sbjct: 515 LLGRRILEDVFFLPAKDTENITNLLLKVVKKLWENYGYSPEDIAVLSPM------RKGAL 568 Query: 649 MYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPE 708 V+ Q + + + ++ + Sbjct: 569 GVENLNVLLQKLFNGFETQEVKFFGTSFKVNDKVMQIKNN----------------YERG 612 Query: 709 KMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTAL 768 + V +GE G ++ ++ +V + + L Sbjct: 613 EDGVFNGET--------------GFIKKIIKSGDEEEIIVSFDGK---NIKYRKTDLEEL 655 Query: 769 KLENGWVETPGHSVSDSATVFASVT---QMAMDNATLNGLARSGRDVRLYSSLDETRTAE 825 L + + + N + R+ + + + + R A Sbjct: 656 TLSYATTVHKAQGMEYPVVILVLHNYHYPLLKRNLLYTAVTRAKKMLIVIGTPWALRQAV 715 Query: 826 KLARHPSFTVVSE 838 + + + Sbjct: 716 ENIKEETRYSSLP 728 >UniRef50_D0LFJ6 TrwC relaxase n=1 Tax=Gordonia bronchialis DSM 43247 RepID=D0LFJ6_GORB4 Length = 2090 Score = 267 bits (682), Expect = 3e-69, Method: Composition-based stats. Identities = 136/982 (13%), Positives = 268/982 (27%), Gaps = 179/982 (18%) Query: 43 LQGSVDKDVFTRLLEGRLPDGADL----SRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGG 98 ++ + ++ F D +L ++ GYD+TFS KSVS + + Sbjct: 185 IRTQLAREWFDADYHRPARDERELSGYIAQQTRQRQSAVAGYDMTFSPVKSVSTLWAIAP 244 Query: 99 ---DKRLIDAHNQAVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQ 155 + DAH AV A+ +E A + V T L+ A F H SR +P Sbjct: 245 IDMASTIEDAHRAAVSDAIAFIEREACYSRLGTNGVAQVDTDGLIAAAFTHRDSRAGDPD 304 Query: 156 LHTHAVVANVTQHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQV-EALGYE 214 LHTH ++N + + + +Y ++ +Y +L+ + ++LG Sbjct: 305 LHTHVAISNKVRV----RDAAGIARWMALDGRPLYKATVSASEVYNSRLELYLHQSLGVT 360 Query: 215 TEVV-----GKHGMWEMPGVPVE---AFSGRSQTIREAVGEDA---------------SL 251 K + E+ G+P + +S R + I V E + + Sbjct: 361 FSERAQPDLRKRAVREIDGIPTDLMQRWSSRREAIEARVAELSAQFHTDHGREPTTGEAF 420 Query: 252 KSRDVAALDTR-KSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPAS 310 A LDTR K + + W ++ + A R + P + Sbjct: 421 DLAQQATLDTREKKHEPRSYAEQRRTWRAEAEQVLGGESGLKGVIADAAVGRPVRPHRGT 480 Query: 311 QDGPDV-QQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENG----VIERARAGIDEAI 365 + D Q+ + I +S + ++ + A L + A +++ + Sbjct: 481 ELDLDTCQEVASDIITVVSATRARWQRPHLRAEAERQLRDRDFAGLDDPATISAAVEQIV 540 Query: 366 -----------------------------SREQLIPLDREKGLFTSGIHVLDELSVRALS 396 + + + + L TS + E + A + Sbjct: 541 DTALSSSDSVRVAGDDLDGALNEPHVLRRANGESVFTRHDTDLHTSRTILAAEARIVAAA 600 Query: 397 RDIMKQN--------RVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRER 448 R + + + G S V +A + +V G G+ Sbjct: 601 RRVDGRTIDGDAVSLALLEQAANGRELNDGQSAMVREMATSGRRVQLVLAPAG-TGKTTA 659 Query: 449 VAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFT-------- 500 + L + G +A + ++++ + + QL+ Sbjct: 660 LRTLARAWNDSGGTTVGLAPTAAAAAVLREELDTTTDTAAKLVQLVATERLQALAATPRW 719 Query: 501 -----------------------------------PGSTVIVDQGEKLSLKETLTLLDGA 525 P + V+VD+ S + T++ Sbjct: 720 RTATNPRLARQVRAARAELSRSRPPTIPDWFTAIGPNTLVVVDEAGLASTADLDTVIRFV 779 Query: 526 ARHNVQVLITDSGQRTGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAG 585 V + Q+ + SA ++D + G + ++ D A LA Sbjct: 780 CARGGSVRLVGDDQQLASISAGGVLRD-----IAHETGALTLSQVVRFSDPAEGAASLA- 833 Query: 586 DFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRY 645 ++ G+ + G A V ++ Sbjct: 834 -----LRDGDPAAL----------------------GFYADAGRVHVAADTVAVEQAYTA 866 Query: 646 LRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLF 705 G + A ++ + + + ++ Sbjct: 867 WAHDRDTGRD---------------TVMLAATRDTVNALNERARADRLAADPAAPHAAVQ 911 Query: 706 RPEKMPVADGERLRVTGKIPGLR------VSGGDRLQVASVSEDA-MTVVVPGRAEPATL 758 + + + G+ + LR V GDR QV ++ D +T TL Sbjct: 912 LSDGLQASIGDLICTRSNRRDLRLSATDWVRNGDRWQVTALGADGALTAQHLDTGRLITL 971 Query: 759 PVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSL 818 P +D L ++ + L R +Y + Sbjct: 972 P-ADYVADNTTLGYASTIHAAQGMTADTCHVVGSDALT-RQLLYVALTRGRHANHIYLAT 1029 Query: 819 DETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESK 878 ET + E + + T +HLA Sbjct: 1030 AETDPHNATTPKARHPNTGLETLAAILERDGAQQSATTAAREATDPATRLHLAAGAYAHA 1089 Query: 879 KLAFSMVDLLTEAKSFAAEGTG 900 A + L EA Sbjct: 1090 VGAAAEDALGAEALQALERDAD 1111 Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats. Identities = 125/836 (14%), Positives = 203/836 (24%), Gaps = 184/836 (22%) Query: 961 VPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRV 1020 +L GQ A R + + R +V AG GKTT R + A N Sbjct: 619 EQAANGRELNDGQSAMVREMATSGRRVQLVLAPAGTGKTTALRTLARAWN----DSGGTT 674 Query: 1021 VGLGPTHRAVGEMRSA-GVDAQTLASFLH----------DTQLQQRSGETPDF------- 1062 VGL PT A +R T A + + R+ P Sbjct: 675 VGLAPTAAAAAVLREELDTTTDTAAKLVQLVATERLQALAATPRWRTATNPRLARQVRAA 734 Query: 1063 --------------------SNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQ 1102 NTL ++DE+ + D+ + A GG GD Q Sbjct: 735 RAELSRSRPPTIPDWFTAIGPNTLVVVDEAGLASTADLDTVIRFVCARGGSVRLVGDDQQ 794 Query: 1103 LQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQ 1162 L +I+ G R + A + ++VR + A + AL Sbjct: 795 LASISAGGVLRDIAHETGALT--LSQVVRFSDPAEGAASLALRDGDPAALGFY------- 845 Query: 1163 VPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPE 1222 + A Y A D + Sbjct: 846 ----------------------------ADAGRVHVAADTVAVEQAYTAWAHDR-----D 872 Query: 1223 AREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELR--RLSTW 1280 T+++ + LN A + V + + G+L R + Sbjct: 873 TGRDTVMLAATRDTVNALNERARA-DRLAADPAAPHAAVQLSDGLQASIGDLICTRSNRR 931 Query: 1281 ETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVG 1340 + A V N DG +T Q + + P + VA+ TL TI Sbjct: 932 DLRLSATDWVRNGDRWQVTALGADGALTAQHLDTGRLITLPADYVADNTTLGYASTIHAA 991 Query: 1341 TGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAI 1400 G V TR++ +H + Y Sbjct: 992 QGMTA--------------DTCHVVGSDA---------LTRQLLYVALTRGRHANHIY-- 1026 Query: 1401 TAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNA 1460 L E + + + + + Sbjct: 1027 ---------------LATAETDPHNATTPK--------ARHPNT----GLETLAAILERD 1059 Query: 1461 VQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPARFIAPGR 1520 + +A + + L + A AA L L + A + R Sbjct: 1060 GAQQSAT--TAAREATDPATRLHLAAGAYAHAVGAAAEDALGAEALQALERDADNLYSTR 1117 Query: 1521 KYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGEGRVKGSGDAQFVALQ-GSRN 1579 G + LQ + Sbjct: 1118 TGR------------------------------PIGTLTDAPAWPVLRHHLATLQLRGAD 1147 Query: 1580 GESLLADNMQDGVRIARDNPDSGVVVRIAGE--------GRPWNPGAITGGRVWGDIPDN 1631 LA + D+P + + RI PW P A TG D Sbjct: 1148 PLHRLATAIDMRELDTADDPAAVLDWRIDDTQNHSAGTGPLPWLPQAPTG---LDDTWRT 1204 Query: 1632 SVQPGAGNGEPVTAEVLAQRQAEEAIRRETERRADEIVRKMAENKPDLPDGKTEQAVREI 1691 + A + EV AQ ++ + + D +A + Sbjct: 1205 YLTARADCTRDLATEVAAQTATWTPETAP-RWARPLLLADPDRGQQLVADLAVWRASHAV 1263 Query: 1692 AGQERDRAAITEREAALPEGVLREPQRVREAVREIARENLLQERLQQMERDMVRDL 1747 A +R A T A L R ++ A + E ++ ++ D Sbjct: 1264 ADTDRRPAGPTPPAARLARHHRTLTDRATALIQATADIHRWSELAASIDNHLLADP 1319 >UniRef50_Q0QW05 Putative uncharacterized protein n=1 Tax=Neisseria lactamica RepID=Q0QW05_NEILA Length = 831 Score = 267 bits (681), Expect = 3e-69, Method: Composition-based stats. Identities = 121/735 (16%), Positives = 247/735 (33%), Gaps = 152/735 (20%) Query: 31 ERWAGRGAEQL-----GLQ---------GSVDKDVFTRLLEG----RLPDGADLSRMQDG 72 G GAE+L GL+ + D+++F LL+G P+ ++ ++G Sbjct: 33 GTLFGNGAEELFRQYGGLEKHGNLKFGQNAKDRNLFHALLKGEVPIFDPETKEIIGFKEG 92 Query: 73 SNRHRPG-YDLTFSAPKSVSMMAMLGGD------------KRLIDAHNQAVDFAVRQVEA 119 + + G YD TFSAPKSVS++ L + + L A +A D V ++ Sbjct: 93 AKNRKTGAYDFTFSAPKSVSLLYALAEERSESDQAARKLSRALKTAFKEANDIVVAHMQE 152 Query: 120 LASTRVMTDGQSETVLTGNLVMALFNHDTSRDQ-----EPQLHTHAVVANVTQH--NGEW 172 DG+++ V ++A F HD +R +P LH H V N + Sbjct: 153 KVLMNNFVDGKNQKVFNNQAIIAQFLHDDARRNKDGFVDPSLHCHNVFFNEVIAGYDENG 212 Query: 173 KTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVG-KHGM-WEM---- 226 + + K+ + + + A+G+ +R LK++++ LG E K+G +E+ Sbjct: 213 QAI-----FKSIDNLALISMRNAYGQFFRNILKQKIKDLGIEIVETEIKNGTSFEIVLTD 267 Query: 227 ----PGVPVEAFSGRSQTIREA---VGEDASLKSRDVAALDT-------RKSKQHVDPEI 272 ++ FS R + I ++ K++ A L R Sbjct: 268 NEVEQREILDFFSSRKKEIDAEFKKQKKNPENKNKSEAQLRDEINQRIKRPKSDKYPRAD 327 Query: 273 KMAEWMQTLKET--GFDIRAYRDAADQRADLRTLTPG---------------------PA 309 + + D + + + R Sbjct: 328 WLKALSNRFEARFGNIDFEKFAEQPHETTFSRMAKEAKSFFKNFFSSSKEKETEEIKLKQ 387 Query: 310 SQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQ 369 +++ + + + S + D+L + + N ++ A ID+ + E Sbjct: 388 QAALKNMKLRLFEILENQSRQSSLVQKGDLLTAVL-MDGDLNFDLDEAEKYIDDFLK-EN 445 Query: 370 LIPLDREKGLFTSGIHVLDELSVRALSRD-----------IMKQNRVTVHPEKSVPRTAG 418 + + K ++ S I + +EL ++ +N + + ++ + Sbjct: 446 CQVVGKTKEVYVSNIVIAEELEIQEKIEKLKNEQIKSSLLGADENIMHIEKIRNSGCSLE 505 Query: 419 YSDAVSVLAQDRPSLAIVSGQGGAAGQRE---RVAELVMMAREQGR-------------- 461 + + ++ + + +A V G G G+ V + + E+ R Sbjct: 506 QLNLIDLIVRGKSKIACVQGDAG-TGKSYAASLVKTVSEIYAERRRATNAAIASVKDSVP 564 Query: 462 --EVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPG---STVIVDQGEKLSLK 516 + +A ++ +++ + + I E + VI+D+ +S Sbjct: 565 ELNLMGMAFMGKTAKDLEDGTGIKSQTIAKFLLNWEKNGKEVNNDFNLVIIDEASMISAA 624 Query: 517 ETLTLLDGAA--RHNVQVLITDSGQ--RTGTGSALMAMKDAGVNT-----YRWQGGEQRP 567 + L + + + + D Q G G+ M+ AGV T R Q + Sbjct: 625 DARRLFEYIDLCPNTRCIFMGDVNQFSSVGRGTIFDQMQKAGVETTKLGNIRRQKTRESK 684 Query: 568 ATIISEPDRNVRY---------------------ARLAGDFAASVKAGEESVAQVSGVRE 606 + + +++ D+ KAGEE +A Sbjct: 685 VVVQRFKKGQINKMFDFAERRKIFEEVPNIDNLISKMVQDYTDKFKAGEEVIALSGTNAV 744 Query: 607 QAILTQAIRSELKTQ 621 + L + IR EL Sbjct: 745 RNELNRRIRDELFKD 759 Score = 159 bits (402), Expect = 9e-37, Method: Composition-based stats. Identities = 85/671 (12%), Positives = 197/671 (29%), Gaps = 62/671 (9%) Query: 545 SALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGV 604 + A+ V + + E + R G + + A + + Sbjct: 66 NLFHALLKGEVPIFDPETKEI-------IGFKEGAKNRKTGAYDFTFSAPKSVSLLYALA 118 Query: 605 REQ-------AILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVME 657 E+ L++A+++ K + + + L ++D +++ + + + + Sbjct: 119 EERSESDQAARKLSRALKTAFKEANDIVVAHMQEKVLMNNFVDGKNQKVFNN-QAIIAQF 177 Query: 658 QWNPETRSHDRYVIDRVT----AQSHSLTLRDAQGETQVVRISSLD--SSWSLFRPEKMP 711 + R+ D +V + + + D G+ I +L S + + Sbjct: 178 LHDDARRNKDGFVDPSLHCHNVFFNEVIAGYDENGQAIFKSIDNLALISMRNAYGQFFRN 237 Query: 712 VADGERLRVTG-KIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKL 770 + ++++ G +I + G ++ + + + K Sbjct: 238 ILK-QKIKDLGIEIVETEIKNGTSFEIVLTDNEVEQREILDFFSSRKKEIDAEFKKQKKN 296 Query: 771 ENGWVETPGHSVSD-SATVFASVTQMAMDNATLNGLA---RSGRDVRLYSSLDETRTAEK 826 ++ + + + + L L+ + + E Sbjct: 297 PENKNKSEAQLRDEINQRIKRPKSDKYPRADWLKALSNRFEARFGNIDFEKFAEQPHETT 356 Query: 827 LARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVD 886 +R + + + I ++ A + + L + D Sbjct: 357 FSRMAKEAKSFFKNFFSSSKEKETEEIKLKQQAALKNMKLRLFEILENQSRQSSLVQKGD 416 Query: 887 LLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRH 946 LLT E I+ +K + G + VS E I Sbjct: 417 LLTAVLMDGDLNFDLDEAEKYIDDFLKENCQVV-----GKTKEVYVSNIVIAEELEIQEK 471 Query: 947 ILEGKE--------AVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGK 998 I + K + + + Q +I+ + VQG AG GK Sbjct: 472 IEKLKNEQIKSSLLGADENIMHIEKIRNSGCSLEQLNLIDLIVRGKSKIACVQGDAGTGK 531 Query: 999 TT---QFRAVMSAVNMLPESERPRVV------------GLGPTHRAVGEMRS-AGVDAQT 1042 + + V + + G+ + ++ G+ +QT Sbjct: 532 SYAASLVKTVSEIYAERRRATNAAIASVKDSVPELNLMGMAFMGKTAKDLEDGTGIKSQT 591 Query: 1043 LASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAA-GGGRAVASGDTD 1101 +A FL + + ++G+ + L ++DE+SM+ D R + I R + GD + Sbjct: 592 IAKFLLNWE---KNGKEVNNDFNLVIIDEASMISAADARRLFEYIDLCPNTRCIFMGDVN 648 Query: 1102 QLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTP-ELREAVYSLINRDVERALSGLESVKP 1160 Q ++ G F Q ++ + + I RQ E + V + + E K Sbjct: 649 QFSSVGRGTIF-DQMQKAGVETTKLGNIRRQKTRESKVVVQRFKKGQINKMFDFAERRKI 707 Query: 1161 SQVPRQEGAWA 1171 + Sbjct: 708 FEEVPNIDNLI 718 >UniRef50_UPI00016C0EC6 helicase, RecD/TraA family protein n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0EC6 Length = 740 Score = 261 bits (667), Expect = 2e-67, Method: Composition-based stats. Identities = 111/798 (13%), Positives = 215/798 (26%), Gaps = 133/798 (16%) Query: 697 SLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSG-GDR-----LQVASVSEDAMTVVVP 750 +D LF M + G++ +V+ + G R ++ V E +V Sbjct: 41 KVDDEVKLFGEYMMHPSYGKQFKVSSFVKLESKKNCGIRKILSSGLISGVGEKLAKKIVD 100 Query: 751 GRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGR 810 E T + D + L G + +S+S+ + + + Sbjct: 101 KFGE-KTFEIIDQEPSKLTQIPGISKEKAYSISEQYKSEYELKNVMLALNEYE----FSA 155 Query: 811 DVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHL 870 + + + + + + + + + + I Sbjct: 156 VMAIKIYDKYKEKTLDVLKENPYALARDIEGVGFTKADELAKKIGVEREHWGRIKAGILF 215 Query: 871 ALPV-VESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTG 929 L S V L E + + L+ Sbjct: 216 VLNAIKSDGHTCCSKVFLEQEVMRLLD--VDIELVNNAMEMLNLERKLVI---KVYDSEV 270 Query: 930 LLVSRASYEAEKSILRHILEGKEA---------VMPLMERVPGELMEKLTSGQRAATRMI 980 ++ + A Y E+ I + ++ A V M + EL L QR A Sbjct: 271 MVCNIALYYKEQEIAKRLMTLASAEKKLNANFDVRKEMAQTERELKIDLVKEQREAIINS 330 Query: 981 LETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMR-SAGVD 1039 + TV+ G T ++ A+ + V+ PT RA M + + Sbjct: 331 MV--KGVTVITGG----PGTGKTTIIKALIHMVAKLDETVLLAAPTGRAAKRMEIATQAE 384 Query: 1040 AQTLASFLHD--------TQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGG 1091 +T+ L E + ++DE SMV M Sbjct: 385 TKTIHRLLEIAFNKDKSFESQFFCRNEDNPLETDVLIVDEISMVDIYLMDSILK-ALRCN 443 Query: 1092 GRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERA 1151 R V GDTDQL ++ G R V ++++ RQ E + + E Sbjct: 444 QRLVLIGDTDQLPSVGAGNILRDIIKSGKIKVIRLEQVFRQAKESAIIINAHKINHGEEI 503 Query: 1152 LSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEA 1211 ++ E + + V + AK + ++ Sbjct: 504 IANKEKSDFFIIDEKTQNDVKNTLVDLMTKRLPAKYEDLDVMKDVQ-------------- 549 Query: 1212 IVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRD 1271 + + EL VM LN + Sbjct: 550 ----------------------------ILVPMRKGLLGVHEL--NGVMQNALNLKSDDK 579 Query: 1272 GELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTL 1331 E +T D ++ N Y+ I + GL+ Sbjct: 580 EEYEYRNTLYRVGDKVMQTKNNYNLIWKVPAGSGLVV----------------------- 616 Query: 1332 YTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAE 1391 D + + + + ++ ++ + Sbjct: 617 -----------DEGMGVYN--------GDMGVIKEIDKYEKVITVEFDGKKRVDYEYANL 657 Query: 1392 QHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQ 1451 +DL+Y T H +QG+ I + ++ Y A++R K+ V + NR+ Sbjct: 658 GELDLSYVTTIHKSQGSEYP--IVILPLFSGPTVLLSRNLLYTAVTRAKKMV-IIVGNRE 714 Query: 1452 GWTDAINN--AVQKGTAH 1467 I+N V++ T+ Sbjct: 715 TIRKMISNNKEVERDTSL 732 Score = 177 bits (447), Expect = 4e-42, Method: Composition-based stats. Identities = 69/698 (9%), Positives = 173/698 (24%), Gaps = 109/698 (15%) Query: 197 GRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVEAFSGRSQTIREAVGEDA------S 250 G +K+ ++ +E + ++PG+ E S+ + Sbjct: 91 GEKLAKKIVDKFGEKTFEIIDQEPSKLTQIPGISKEKAYSISEQYKSEYELKNVMLALNE 150 Query: 251 LKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPAS 310 + V A+ + ++ ++ +AD G Sbjct: 151 YEFSAVMAIKIYDKYKEKTLDVLKENPYALARD-------IEGVGFTKADELAKKIGVER 203 Query: 311 QDGPDVQQAVTQAIAGL-SERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQ 369 + ++ + + + S+ + + + +L + IE ++ + Sbjct: 204 EHWGRIKAGILFVLNAIKSDGHTCCSKVFLEQEVMRLL---DVDIELVNNAMEMLNLERK 260 Query: 370 LIPLDREK-------GLFTSGIHVLDELSVRALSRDIM------KQNRVTVHPEKSVPRT 416 L+ + L+ + L A + + ++ E + Sbjct: 261 LVIKVYDSEVMVCNIALYYKEQEIAKRLMTLASAEKKLNANFDVRKEMAQTERELKIDLV 320 Query: 417 AGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNM 476 +A + V G G+ + L+ M + V + A R+ M Sbjct: 321 KEQREA---IINSMVKGVTVITGGPGTGKTTIIKALIHMVAKLDETVLLAAPTGRAAKRM 377 Query: 477 KQDERLSGELITGRRQL--------------LEGMAFTPGSTVIVDQGEKLSLKETLTLL 522 + + + I ++ +IVD+ + + ++L Sbjct: 378 EIATQAETKTIHRLLEIAFNKDKSFESQFFCRNEDNPLETDVLIVDEISMVDIYLMDSIL 437 Query: 523 DGAARHNVQVLITDSGQR--TGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRY 580 + VLI D+ Q G G+ L + +G R A + + Sbjct: 438 KALRCNQRLVLIGDTDQLPSVGAGNILRDIIKSGKIKVIRLEQVFRQAKESAIIINAHKI 497 Query: 581 ARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLD 640 + A+ + + + E T + +D Sbjct: 498 NH-GEEIIANKEKSDFFII---------------------------DEKTQNDVKNTLVD 529 Query: 641 SRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDS 700 ++ L Y VM+ + + L ++ Sbjct: 530 LMTKRLPAKYEDLDVMKD------------VQILVPMRKGLLGVHELNGVMQNALNLKSD 577 Query: 701 SWSLFRPEKMPVADGERLRVTGKIPGL----------------RVSGGDRLQVASVSEDA 744 + G+++ T L V GD + + + Sbjct: 578 DKEEYEYRNTLYRVGDKVMQTKNNYNLIWKVPAGSGLVVDEGMGVYNGDMGVIKEIDKYE 637 Query: 745 MTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQ---MAMDNAT 801 + V + + + L L + + + N Sbjct: 638 KVITVEFDGK-KRVDYEYANLGELDLSYVTTIHKSQGSEYPIVILPLFSGPTVLLSRNLL 696 Query: 802 LNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQ 839 + R+ + V + + + R + Sbjct: 697 YTAVTRAKKMVIIVGNRETIRKMISNNKEVERDTSLLH 734 >UniRef50_C4DCY8 TrwC relaxase n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DCY8_9ACTO Length = 1471 Score = 261 bits (666), Expect = 2e-67, Method: Composition-based stats. Identities = 119/826 (14%), Positives = 243/826 (29%), Gaps = 103/826 (12%) Query: 79 GYDLTFSAPKSVSMMAMLGGD---KRLIDAHNQAVDFAVRQVEALASTRVMT----DGQS 131 G+DLT PKS S++ L + +L +AV V +E + + ++ Sbjct: 185 GFDLTLDMPKSFSIVQALAPEPVATQLDAVFQEAVRETVAALETWTAYGLKGHHGDGKKA 244 Query: 132 ETVLTGNLVMALFNHDTSR-----DQEPQLHTHAVVANVTQH-NGEWKTLSSDKVGKTGF 185 V L+ + H T+R +P LH H + N+ + +W+T++S Sbjct: 245 RRVDADGLISWVATHRTARPVATAAPDPHLHAHVQILNMVHCSDDKWRTVASGG------ 298 Query: 186 IENVYANQIAFGRLYREKLKEQV-EALGYETEVVGKHGMWEMPGVPVEA---FSGRSQTI 241 +++ + A + +++ LG + WE+ G+ + FS R + Sbjct: 299 -RDIFRHAHAADAYIKARIRHYTSTQLGIQWHRDPVTRQWEITGITPDMRGVFSKRQHQV 357 Query: 242 REAVGE------DASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAA 295 AV A+ + A TR+ D + +W + TG D+ + Sbjct: 358 LAAVAANWVQEPHATPRQSKACAAATRQPAAPWDIAALLQDWHRQAALTGADVDQLLRSI 417 Query: 296 DQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIE 355 A + G + + S RK T D+LA LP +E Sbjct: 418 TAEASPPSARQGLRPTIVEIADEVFHPDVGVTSHRKSV-TRADILAAVAEALPAGVDCLE 476 Query: 356 RARAGIDEAIS-REQLIPLDREKG-------LFTSGIHVLDELSVRALSRDIMKQNRVTV 407 R D+ ++ + L R+ G +T+ V E+++ + + V Sbjct: 477 RLEHLTDQVLAVDGYAVRLKRDAGATLSNAQRYTTADIVASEIAIFNAASKRLNGAYPRV 536 Query: 408 HPE------------KSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMM 455 + + LA + V G G +G+ + L Sbjct: 537 DASLVAEVVADFETSAGFHLSQQQRAVIDRLATSGHGVDAVIGVPG-SGKTTIMRVLAEA 595 Query: 456 AREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLL-EGMAFTPGSTVIVDQGEKLS 514 G +V + + + ++ + + + G ++VD+ Sbjct: 596 HARAGHQVWGASTAAVAALRLRHATAIPSRTVAYWLHRITSGPGLEGVDVLVVDEAGMAD 655 Query: 515 LKETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMKDAGVNTYRWQGGEQRPATIISEP 574 ++ TLL A R Q++ + + D G Q + Sbjct: 656 DRQKATLLSAAERSGTQIIGIGDTFQLRSPGVGSTFGD-----VHTIVGGQVLTDFRRQR 710 Query: 575 DRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTAL 634 R+A A F E++ + + T+ + Sbjct: 711 YETHRHALSAWRF----DHRRETLHMFADTGAIHATNSL--------------DDTLAGM 752 Query: 635 SPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVR 694 + W + + P ++Q + I AQ+ L T Sbjct: 753 TAAWW----ARFQHITNPHDAIDQIMVLAGHNSDVTILNAAAQATRLAAGHLDAGTGFTY 808 Query: 695 ISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLR-----VSGGDRLQVASVSEDAMTVVV 749 ++ + L+ G+ + R + G R V ++ + + Sbjct: 809 TTAPGQAMRLY--------AGDVVVTRANDYRPRGQGPDILNGIRAHVVTIDAATGQLRL 860 Query: 750 PGRA--------EPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNAT 801 R T+ + L V + +A Sbjct: 861 EWRETTPCGAILRQQTVSRDYIDAGNVSLGYAMVVHKDQGGQAEHVIVNLTG--MSPDAA 918 Query: 802 LNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGET 847 L+R V + + + A++ R + + ++ Sbjct: 919 YAALSRHMEHVDAFLAREVVEHADRATRLGAARDGQDLLQRAIDAY 964 Score = 171 bits (432), Expect = 3e-40, Method: Composition-based stats. Identities = 141/1023 (13%), Positives = 249/1023 (24%), Gaps = 166/1023 (16%) Query: 779 GHSVSDSATVFASVTQMAMDNATLNGL----ARSGRDVRLYSSLDETRTAEKLARHPSFT 834 G V A+V + + + + Sbjct: 348 GVFSKRQHQVLAAVAANWVQEPHATPRQSKACAAATRQPAAPWDIAALLQDWHRQAALTG 407 Query: 835 VVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSF 894 +Q+ + + + V S + + + D+L Sbjct: 408 ADVDQLLRSITAEASPPSARQGLRPTIVEIADEVFHPDVGVTSHRKSVTRADILAAVAEA 467 Query: 895 AAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGT-----GLLVSRASYEAEKSILRHILE 949 G E + Q+ D V + + G + +E +I + Sbjct: 468 LPAGVDCLERLEHLTDQVLAVDGYAVRLKRDAGATLSNAQRYTTADIVASEIAIFNAASK 527 Query: 950 GKEAVMPLME---------RVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTT 1000 P ++ L+ QRA + + V G G GKTT Sbjct: 528 RLNGAYPRVDASLVAEVVADFETSAGFHLSQQQRAVIDRLATSGHGVDAVIGVPGSGKTT 587 Query: 1001 QFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAG-VDAQTLASFLHDTQLQQRSGET 1059 R + A +V G A +R A + ++T+A +LH Sbjct: 588 IMRVLAEAHARA----GHQVWGASTAAVAALRLRHATAIPSRTVAYWLHRITSG-----P 638 Query: 1060 PDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRS 1119 + ++DE+ M + A + G + + GDT QL++ G F T Sbjct: 639 GLEGVDVLVVDEAGMADDRQKATLLSAAERSGTQIIGIGDTFQLRSPGVGSTFGDVHTIV 698 Query: 1120 AADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEF 1179 V + + RQ E S F Sbjct: 699 GGQV--LTDFRRQRYETHRHAL---------------------------------SAWRF 723 Query: 1180 SHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVR--DYTGRTPEAREQTLIVTHLNEDR 1237 H +E A A+ + D + A + +A +Q +++ N D Sbjct: 724 DHRRETLHMFADTGAIHATNSLDDTLAGMTAAWWARFQHITNPHDAIDQIMVLAGHNSDV 783 Query: 1238 RVLNSMIHDVREKAGELGKEQVMVPVLNTANIR-----DGELRRLSTWETHRDALVLVDN 1292 +LN+ R AG L D + R + + +++ Sbjct: 784 TILNAAAQATRLAAGHLDAGTGFTYTTAPGQAMRLYAGDVVVTRANDYRPRGQGPDILNG 843 Query: 1293 VYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDR 1352 + + I G + L+ + ++ Sbjct: 844 IRAHVVTIDAATGQLRLE------------------------------------WRETTP 867 Query: 1353 ERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETF 1412 + + + +V+ L YA+ H QG Sbjct: 868 CGAILRQQTVSRDYIDAGNVS----------------------LGYAMVVHKDQGGQAEH 905 Query: 1413 AIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNR-QGWTDAINNAVQKGTAHDVFE 1471 I ++AY ALSR +HV + D D+ + Sbjct: 906 VIVNLTGM-------SPDAAYAALSRHMEHVDAFLAREVVEHADRATRLGAARDGQDLLQ 958 Query: 1472 PKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPAR----------FIAPGRK 1521 D ER L +VA L S A Sbjct: 959 RAIDAYADYLERPDPEPVALAEVAGYEEYLDHRTWPQPTSTTDPFRHHHQSDDPAAATPA 1018 Query: 1522 YPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGEGRVKGSGDAQFVALQGSRNGE 1581 + P D+ + SG+ S A A G R Sbjct: 1019 DAASDIEAPRLDQPWWQRRLGAFTTDELQTQRAALESGDAAAPESDLAHIEAELGLRRSM 1078 Query: 1582 SLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPGAITGGRVWGDIPDNSVQPGAG--- 1638 + + + R + V R A P P + D Sbjct: 1079 RIDVRDAESRDRTQARTTAARAVSRSAEPDDPDRPTPAPRLQAAIDAERTLPNTMLPVPS 1138 Query: 1639 --------NGEPVTAEVLAQRQAEEA---IRRETERRADEIVRKMAENKPDLPDGKTE-- 1685 + Q R E R E+ + + +L +T Sbjct: 1139 TPTTGTTGAAAIGEKPLWDQWWQRRHGAFTRAELTDRLRELDATIDYVEHELATARTLSD 1198 Query: 1686 QAVREIAGQERDRAAITEREA----ALPEGVLREPQRVREAVREIARENLLQERLQQMER 1741 Q + + + D +A A ++ Q RE A Q R+ + R Sbjct: 1199 QRAQAMPQRLADARNGDGPQACSLIAHRRALVATAQASARVDREHAAAQAAQARMDSLHR 1258 Query: 1742 DMV 1744 Sbjct: 1259 RAQ 1261 >UniRef50_A4XG10 ATP-dependent DNA helicase, RecD/TraA family n=2 Tax=Clostridia RepID=A4XG10_CALS8 Length = 741 Score = 261 bits (665), Expect = 3e-67, Method: Composition-based stats. Identities = 85/619 (13%), Positives = 171/619 (27%), Gaps = 118/619 (19%) Query: 877 SKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRAS 936 + L+ + ++ +++ IK ++ D G L Sbjct: 226 EGHICLPKEKLILFVSKALEQ--DTEKVEEALDSLIKAKRVVI-DTVDGLEMVFLY--GF 280 Query: 937 YEAEKSILRHILEGKE------AVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVV 990 +E E+ I I + + + + + Q+ A +M L Sbjct: 281 FECERYIAEKIASMLKEYDDILDIDERISEFEKKNSIVFSQNQKKAIKMALTQGVSVITG 340 Query: 991 QGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRS-AGVDAQTLASFLH- 1048 T ++ + + E E +V PT RA M+ +A+T+ L Sbjct: 341 GPG------TGKTTIIKCIIEIFEQEGKKVFLCAPTGRAAKRMQQQCEKEAKTIHRLLEM 394 Query: 1049 ---DTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQA 1105 D+Q+ + G + ++DE SMV + M + R V GD DQL + Sbjct: 395 TVTDSQVFFQKGPNNPLRCDVIIVDEMSMVDSYIMYYLLS-ATKDTTRLVLVGDKDQLPS 453 Query: 1106 IAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPR 1165 + G + + E+ RQ+ + + + + E L+ Sbjct: 454 VGAGNILKDLIRSDVVPYVRLTEVYRQSEDSFIVLNAHRINNGE--FPYLQKN------- 504 Query: 1166 QEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEARE 1225 ++ E + L + +Y P Sbjct: 505 ----------------------SDFYFIQKNSPEEILKTIVELVTKKLPNYLSADPLT-- 540 Query: 1226 QTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRD 1285 ++ + G +V+ LN + E+ D Sbjct: 541 DIQVLCPSKKGV-------------VGMYNINRVLQQYLNPKDGSKKEVVYKENTFRVGD 587 Query: 1286 ALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRM 1345 ++ + N Y I + + + GD Sbjct: 588 KVMQIKNNYSLEFTIIEG--------------------------EEKGKVSTGIFNGDIG 621 Query: 1346 RFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGA 1405 DR A S + + ++L+YA+T H + Sbjct: 622 VIKDIDR-----AGSAMEIVFDDDK------------LVFYDFSLLDDLELSYAMTVHKS 664 Query: 1406 QGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQ--K 1463 QG+ + ++ Y A++R K+ V + + I N + + Sbjct: 665 QGSEFRC--IVMPVVETYPILMTRNLLYTAVTRAKELVVLV-GKKSALEYMIANQKEAMR 721 Query: 1464 GTAH-DVFEPKPDREVMNA 1481 +A D + K + A Sbjct: 722 YSALYDFLKRKLKDTQLQA 740 Score = 193 bits (489), Expect = 7e-47, Method: Composition-based stats. Identities = 66/611 (10%), Positives = 157/611 (25%), Gaps = 93/611 (15%) Query: 286 FDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSE--RKVQFTYTDVLART 343 F + + + ++ D G + D + + + S + ++ Sbjct: 181 FLLDVFPELDFKKVDRLAFDLGVSPDDMRRISAKIVNLLNMGSNNEGHICLPKEKLILFV 240 Query: 344 VGILPPENGVIERARAGIDEAISREQLIPLDREK-------GLFTSGIHVLDELSVRALS 396 L E+ +D I ++++ + G F ++ ++++ Sbjct: 241 SKALE---QDTEKVEEALDSLIKAKRVVIDTVDGLEMVFLYGFFECERYIAEKIASMLKE 297 Query: 397 RDIM---KQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELV 453 D + + + S+ + A+ + S+ G + ++ Sbjct: 298 YDDILDIDERISEFEKKNSIVFSQNQKKAIKMALTQGVSVITGGPGTGKT---TIIKCII 354 Query: 454 MMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQ----------LLEGMAFTPGS 503 + ++G++V + A R+ M+Q + I + Sbjct: 355 EIFEQEGKKVFLCAPTGRAAKRMQQQCEKEAKTIHRLLEMTVTDSQVFFQKGPNNPLRCD 414 Query: 504 TVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR--TGTGSALMAMKDAGVNTYRWQ 561 +IVD+ + LL VL+ D Q G G+ L + + V Y Sbjct: 415 VIIVDEMSMVDSYIMYYLLSATKDTTRLVLVGDKDQLPSVGAGNILKDLIRSDVVPYVRL 474 Query: 562 GGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQ-AILTQAIRSELKT 620 R + R G+F K + Q + E + + + +L Sbjct: 475 TEVYRQSEDSFIVLNAHRIN--NGEFPYLQKNSDFYFIQKNSPEEILKTIVELVTKKLPN 532 Query: 621 QGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHS 680 + P + L P + + MY V++Q+ Sbjct: 533 Y-LSADPLTDIQVLCP-----SKKGVVGMYNINRVLQQY--------------------- 565 Query: 681 LTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGL------------- 727 + +++ G+++ L Sbjct: 566 ------------LNPKDGSKKEVVYKENT--FRVGDKVMQIKNNYSLEFTIIEGEEKGKV 611 Query: 728 --RVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDS 785 + GD + + + + + + S L+L Sbjct: 612 STGIFNGDIGVIKDIDRAGSAMEIVFD-DDKLVFYDFSLLDDLELSYAMTVHKSQGSEFR 670 Query: 786 ATVFA---SVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKT 842 V + + N + R+ V L + Sbjct: 671 CIVMPVVETYPILMTRNLLYTAVTRAKELVVLVGKKSALEYMIANQKEAMRYSALYDFLK 730 Query: 843 RAGETSLETAI 853 R + + A+ Sbjct: 731 RKLKDTQLQAL 741 >UniRef50_Q58IS3 Putative uncharacterized protein n=2 Tax=Streptomyces RepID=Q58IS3_9ACTO Length = 1379 Score = 261 bits (665), Expect = 3e-67, Method: Composition-based stats. Identities = 150/959 (15%), Positives = 298/959 (31%), Gaps = 109/959 (11%) Query: 74 NRHRPGYDLTFSAPKSVSMMAMLGG---DKRLIDAHNQAVDFAVRQVEALASTRVM-TDG 129 + G+DL PKS S++ L ++ L D +QA RQ+E A V DG Sbjct: 199 DDRVRGWDLVLDLPKSDSVLQGLMDALSEQELRDLVHQAKRDTFRQLEKWAGYAVGSKDG 258 Query: 130 QSETVLTGNLVMALFNHDTSRD------QEPQLHTHAVVANVT-QHNGEWKTLSSDKVGK 182 + + TG L+ H ++R +P LH H +AN+ +G W+++++ Sbjct: 259 EPVRLATGGLLAWSVEHQSARPIRAGEPGDPHLHLHVTIANMALCSDGAWRSIANSG--- 315 Query: 183 TGFIENVYANQIAFGRLYREKLKEQV-EALGYETEVVGKHGMWEMPGVPVEA---FSGRS 238 ++++ + A ++ +++ E G E G WE+ GVP E FS R+ Sbjct: 316 ----QDLHRHASAADAYFKARVRYLTYERFGVRRERNESTGGWEVRGVPEELRDVFSRRA 371 Query: 239 QTIREAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQR 298 + E G DAS + A+++T++ K VD W + ++ D+ A DAA Sbjct: 372 AIVEEKAGADASRTEKQAASMETKRDKVDVDATTMRDSWRRRAEQVVGDVDAMVDAAAPG 431 Query: 299 ADLR-------TLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPE- 350 GP D+ V GL+ F+ +LA L Sbjct: 432 PPGPDGGAGIDGPGTGPRVPPPGDIAAVVFDPKTGLTANDKTFSRAQLLAAVANALEFGI 491 Query: 351 NGVIERARAGIDEAISREQLIPLDREKG--------LFTSGIHVLDELSVRALSRDIMKQ 402 + + D+ ++ E G +T+ + E VR + + Sbjct: 492 DADPDSLELLCDDVLAVEGYAVRVPTIGSTVMSSVDRYTTQDILEAEEGVRTEALERFDS 551 Query: 403 NRVTVHPEK------------SVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVA 450 + + ++ + AV+ + + + G G AG+ + Sbjct: 552 GALQLTADQAAAAIDVFQVAAGFELSEEQRAAVTRVLTAGHGIDAIVGVAG-AGKSTLME 610 Query: 451 ELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPG-STVIVDQ 509 + G + N+ + + +E G ++VD+ Sbjct: 611 ACRIGWDATGTTYAGATLAAVAAKNLTDASGIPARTVAAWLGEIENGNGLRGIDVLVVDE 670 Query: 510 GEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMKDAGVNTYRWQGGEQRPAT 569 + + L+ AAR +V+ + ++ Sbjct: 671 ATMVDDRAAAVLVTEAARTGTKVVGIGDHLQLQAIGPGGWFRE-----VHRLVHGLTLTE 725 Query: 570 IISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEV 629 + D R A + G+ +A L G L E Sbjct: 726 NRRQEDAAERAA------LEVWRTGDHELAL---------------RMLAEGGRLHPAET 764 Query: 630 TMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGE 689 A S + + L++ P ++ + V+ + +L L Sbjct: 765 AEEARSQILMAWDELRLQEWADPHDLI---------ANMVVLAARNSDVDALNLGAQAIR 815 Query: 690 TQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLR------VSGGDRLQVASVSED 743 + + + +++L + + +A G+ +RV R + G R + ++ + Sbjct: 816 REAGELGD-EHTYALPGGDTLTLAVGDIVRVRENDYRSRRGEGPDMLNGYRAVITAMDDH 874 Query: 744 AMTVVVPGRAEPATL--------PVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQM 795 + + V+ T L G+ T S + Sbjct: 875 HRVEITWRVKDAKAPGGYRHESGWVTPQKVTGGALSLGYAMTIAASQGLTCNTSLMYGHG 934 Query: 796 AMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISH 855 A AT G+ R+ R L+ L + AR E+++ + S Sbjct: 935 ANAFATYPGITRARRQNHLWLPLAVLENEQTRARLGEARTEKERLERAIDAFARFLGQSR 994 Query: 856 QKSAL-----HTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINA 910 + PA + + + A S L + + + + Sbjct: 995 PDGMVSDLLQEPPAPAPLPRQRDLSAEEARAESERRLRQSHMARHGRAKSVSLSHRQAQS 1054 Query: 911 QIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKL 969 + +R + A+ LL + E+++ P ++L Sbjct: 1055 EGQREE--QARRAEEKAKQLLARLRAGAEERAVPSWTKRIYGTASPQELNRLIAEGDRL 1111 Score = 156 bits (393), Expect = 9e-36, Method: Composition-based stats. Identities = 133/884 (15%), Positives = 234/884 (26%), Gaps = 138/884 (15%) Query: 881 AFSMVDLLTEAKSFAAEGTGFTELGGEI---NAQIKRGDLLYVDVAKGY---GTGLLVSR 934 FS LL + G E+ + G + V ++ Sbjct: 473 TFSRAQLLAAVANALEFGIDADPDSLELLCDDVLAVEGYAVRVPTIGSTVMSSVDRYTTQ 532 Query: 935 ASYEAEKSILRHILEG---------KEAVMPLMERVPGELMEKLTSGQRAATRMILETSD 985 EAE+ + LE + ++ +L+ QRAA +L Sbjct: 533 DILEAEEGVRTEALERFDSGALQLTADQAAAAIDVFQVAAGFELSEEQRAAVTRVLTAGH 592 Query: 986 RFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA-GVDAQTLA 1044 + G AG GK+T A + ++ G A + A G+ A+T+A Sbjct: 593 GIDAIVGVAGAGKSTLM----EACRIGWDATGTTYAGATLAAVAAKNLTDASGIPARTVA 648 Query: 1045 SFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQ 1104 ++L + + + ++DE++MV + A A G + V GD QLQ Sbjct: 649 AWLGEIE-----NGNGLRGIDVLVVDEATMVDDRAAAVLVTEAARTGTKVVGIGDHLQLQ 703 Query: 1105 AIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLIN-RDVERALSGLESVKPSQV 1163 AI PG FR + E RQ A + D E AL L Sbjct: 704 AIGPGGWFREV--HRLVHGLTLTENRRQEDAAERAALEVWRTGDHELALRMLAEGGR--- 758 Query: 1164 PRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEA 1223 E + ++ + + Sbjct: 759 ----------------------------LHPAETAEEARSQILMAWDELRLQEWADPHDL 790 Query: 1224 REQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETH 1283 +++ N D LN +R +AGELG E Sbjct: 791 IANMVVLAARNSDVDALNLGAQAIRREAGELGDEHT-------------------YALPG 831 Query: 1284 RDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGD 1343 D L L + + + EG L + AV + + I D Sbjct: 832 GDTLTLAVGDI-----VRVRENDYRSRRGEGPDML-NGYRAVITAMDDHHRVEITWRVKD 885 Query: 1344 RMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAH 1403 E G+V T A + L YA+T Sbjct: 886 AKAPGGYRHESGWVTPQKVTGGA---------------------------LSLGYAMTIA 918 Query: 1404 GAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVY----TDNRQGWTDAINN 1459 +QG + ++ Y ++R ++ ++ + + Sbjct: 919 ASQGLTCNTSLMYGHGANAFAT-------YPGITRARRQNHLWLPLAVLENEQTRARLGE 971 Query: 1460 AVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPARFIAPG 1519 A + + R + + + L++ A + RQ L+ ++ A Sbjct: 972 ARTEKERLERAIDAFARFLGQSRPDGMVSDLLQEPPAPAPLPRQRDLSAEEARA---ESE 1028 Query: 1520 RKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGEGRVKGSGDAQFVALQGSRN 1579 R+ Q ++A G + + G E + A L R Sbjct: 1029 RRLRQSHMA---------RHGRAKSVSLSHRQAQSEGQREEQARRAEEKA-KQLLARLRA 1078 Query: 1580 GESLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPGAITGGRVWGDIPDNSVQPGAGN 1639 G A +P + G+ + AI + Sbjct: 1079 GAEERAVPSWTKRIYGTASPQELNRLIAEGDRLAADAEAIAAEAETRARELAARLDHEKA 1138 Query: 1640 GEPVTAEVLAQRQAEEAIRRETERRADEIVRKMAENKPDLPDGKTEQAVREIAGQERDRA 1699 +T QR A EA + A + G + R++A Sbjct: 1139 TGQLTR---GQRFAAEAGEVLDQADARVATAREHLQTVFAAAGHVDDRARQLAKLAESEG 1195 Query: 1700 AITEREAALPEGVLREPQRVREAVREIARENLLQERLQQMERDM 1743 + + E A ++ ++ R Sbjct: 1196 KGRIALRLAGTSRKEYRELTQRLSAERAGYLQMEADAKRDARQA 1239 >UniRef50_C2KY21 Possible exodeoxyribonuclease V alpha subunit n=1 Tax=Oribacterium sinus F0268 RepID=C2KY21_9FIRM Length = 759 Score = 260 bits (664), Expect = 3e-67, Method: Composition-based stats. Identities = 111/835 (13%), Positives = 226/835 (27%), Gaps = 162/835 (19%) Query: 669 YVIDRVTAQSHSLTL------------RDAQGETQVVRISSLDSSWSLFRPEKMPVADG- 715 Y + +T + TL A+G + + S ++ E G Sbjct: 26 YTVCSITDKGEEFTLVGSFSHISVSEKIKAKGRWKEHPVYGKQFSVEEYQLEVPDSLFGI 85 Query: 716 ERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWV 775 E+ +G I G+ + R V ED++ ++ A + S A+ + Sbjct: 86 EQYLASGAIKGIGKAIAAR-IVKKFKEDSLRIMEEEPERLAEIH-GISMQKAMDIA---- 139 Query: 776 ETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTV 835 T + +F + + + + + L ++ + + + Sbjct: 140 -TNLSGQREQQDIFLLLQGYGISLNLSYKIYQHFQGETL-----------QVLQENPYRI 187 Query: 836 VSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLL-TEAKSF 894 E + + + I+ L E + +L EA+ Sbjct: 188 AEELEGVGFKKCDELAKRVGVEKESPFRMRAGINYTLLQGEWHGHCYLPFSILKREAERI 247 Query: 895 AAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGK--- 951 E + K G + + Y E + +L+ Sbjct: 248 LEMPLEDLEEQLLELQLQGK--------VKVKGENVYRASTYYR-EMRVASRLLQLNVEE 298 Query: 952 -----EAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVM 1006 ++ ++++ L QR A + + T + Sbjct: 299 EEAHVDSWEKAIDKLLDREKITLDPLQRKAVSLAASSGVLVITGGPG------TGKTTTI 352 Query: 1007 SAVNMLPESERPRVVGLGPTHRAVGEMRSAG-VDAQTLASFLHDTQLQ-----------Q 1054 + L + + PT RA M A A+TL L + Sbjct: 353 KTILQLFTGQGKSIALAAPTGRAAKRMGEATDYPAKTLHRLLEYMGREDQEQEDRDFSLF 412 Query: 1055 RSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRL 1114 + E + ++DE SMV M I G R + GD++QL ++ G + Sbjct: 413 QRNEENPLEYDVLIVDEMSMVDLYLMDALLRAI-PVGCRLILVGDSEQLPSVGAGNVLKD 471 Query: 1115 QQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEH 1174 +K+I RQ E V + G +S + QE E+ Sbjct: 472 IIASQCMKTISLKKIFRQAMESDIVVNAHKINQGIEPDLGKKSKDFFFIRGQEPKQILEN 531 Query: 1175 SVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLN 1234 + Y P + + Sbjct: 532 IAILMKEK------------------------------LPKYLSTDPLSIQVMSPQKKGL 561 Query: 1235 EDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVY 1294 LN + + G+ E D ++ + N Y Sbjct: 562 LGVENLNRFLQERLNPPGKNKP----------------EYEGSGNIFRLGDKVMQIKNDY 605 Query: 1295 HRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRER 1354 I + + ++ EG Sbjct: 606 QLAWEI-PGNFNLPIESGEG---------------------------------------- 624 Query: 1355 GYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAI 1414 + +T ++ T++ + R++ Q ++++LAYAIT H +QG+ Sbjct: 625 -VFNGDIGKITEINAYQKTVTVFFEERKVVY-SFQDLENLELAYAITIHKSQGSEYPAV- 681 Query: 1415 ALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQ--KGTAH 1467 L K++ Y A++R K V + + + + ++N + + + Sbjct: 682 -LLPMYPGPKMLMSRNILYTAITRAKSCVCLLGQPK-VFLEMLHNEQELKRYSGL 734 Score = 185 bits (468), Expect = 2e-44, Method: Composition-based stats. Identities = 77/754 (10%), Positives = 182/754 (24%), Gaps = 134/754 (17%) Query: 158 THAVVANVTQHNGEWKTLSSDKVGKTGFIENVYA-----------------NQIAFGRLY 200 +H V+ + G WK V F Y G+ Sbjct: 45 SHISVSEKIKAKGRWK---EHPVYGKQFSVEEYQLEVPDSLFGIEQYLASGAIKGIGKAI 101 Query: 201 REKLKEQVEALGYETEVVGKHGMWEMPGVPVEA-------FSGRSQTIREAVGEDASLKS 253 ++ ++ + + E+ G+ ++ SG+ + + Sbjct: 102 AARIVKKFKEDSLRIMEEEPERLAEIHGISMQKAMDIATNLSGQREQQDIFLLLQG-YGI 160 Query: 254 RDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDG 313 + + Q ++ + +E ++ D G + Sbjct: 161 SLNLSYKIYQHFQGETLQVLQENPYRIAEE-------LEGVGFKKCDELAKRVGVEKESP 213 Query: 314 PDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPL 373 ++ + + + +L R + + + + + + Sbjct: 214 FRMRAGINYTLLQGEWHGHCYLPFSILKREAERILEMPLEDLEEQLLELQLQGK---VKV 270 Query: 374 DREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKS---------VPRTAGYSDAVS 424 E S + ++ R L ++ ++ EK+ + AVS Sbjct: 271 KGENVYRASTYYREMRVASRLLQLNVEEEEAHVDSWEKAIDKLLDREKITLDPLQRKAVS 330 Query: 425 VLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSG 484 + A + G + ++ + QG+ + + A R+ M + Sbjct: 331 LAASSGVLVITGGPGTGKT---TTIKTILQLFTGQGKSIALAAPTGRAAKRMGEATDYPA 387 Query: 485 ELITGRRQLLEGMA-----------------FTPGSTVIVDQGEKLSLKETLTLLDGAAR 527 + + + + +IVD+ + L LL Sbjct: 388 KTLHRLLEYMGREDQEQEDRDFSLFQRNEENPLEYDVLIVDEMSMVDLYLMDALLRAI-P 446 Query: 528 HNVQVLITDSGQR---TGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLA 584 ++++ ++ G G+ L + + R A Sbjct: 447 VGCRLILVGDSEQLPSVGAGNVLKDIIASQCMKTISLKKIFRQAMESDIVVNA------- 499 Query: 585 GDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSR 644 + Q I +L G + P + Sbjct: 500 -----------------------HKINQGIEPDL---GKKSKDFFFIRGQEP-------K 526 Query: 645 YLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSL 704 + + +M++ P+ S D I ++ Q L + R++ + Sbjct: 527 QILENIAI--LMKEKLPKYLSTDPLSIQVMSPQKKGLLGVENLNRFLQERLNPPGKNKPE 584 Query: 705 FRPEKMPVADGERLRVTGKIPGL----------------RVSGGDRLQVASVSEDAMTVV 748 + G+++ L V GD ++ ++ TV Sbjct: 585 YEGSGNIFRLGDKVMQIKNDYQLAWEIPGNFNLPIESGEGVFNGDIGKITEINAYQKTVT 644 Query: 749 VPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQ---MAMDNATLNGL 805 V E + S L+L A + + N + Sbjct: 645 V--FFEERKVVYSFQDLENLELAYAITIHKSQGSEYPAVLLPMYPGPKMLMSRNILYTAI 702 Query: 806 ARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQ 839 R+ V L + Q Sbjct: 703 TRAKSCVCLLGQPKVFLEMLHNEQELKRYSGLAQ 736 >UniRef50_C7Q5H7 TrwC relaxase n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q5H7_CATAD Length = 1386 Score = 260 bits (664), Expect = 3e-67, Method: Composition-based stats. Identities = 136/868 (15%), Positives = 244/868 (28%), Gaps = 150/868 (17%) Query: 58 GRLPDGADLSRMQDGSNRH----RPGYDLTFSAPKSVSMMAMLGGDKR------LIDAHN 107 GR P A++ ++ +R G+DL F+ KS +++ L D+R + +AH Sbjct: 141 GRAPTEAEIKKIHTEESRRARAAVAGFDLVFAPVKSAALVWAL--DERPEVRAAVREAHE 198 Query: 108 QAVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ 167 A D A+ +E A+ G + T LV A F+H SR +P LHTH +++ Q Sbjct: 199 AARDAALEILETHAAYTRTGRGGIAQIETRGLVAARFDHFDSRAGDPNLHTHVAISSKVQ 258 Query: 168 H-NGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQV-EALGYETEVV-----GK 220 +G W++L +Y +A Y + + ++ G + Sbjct: 259 GVDGIWRSLD---------ARALYKMTVAVSEFYNTRFETELTTRTGVSWTERPDTTGKR 309 Query: 221 HGMWEMPGVPVE---AFSGRSQTIREAVGEDASL---------------KSRDVAALDTR 262 + E+ G+ + FS R I + A L+TR Sbjct: 310 EPVREIAGIDPKMVAHFSSRRTEIEARYEQLLRGFRREHGYDPSRAVCHDLARQANLETR 369 Query: 263 KSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQ 322 + K+ +M E + F +A RD D DV Sbjct: 370 EGKKAPRSLAEMREDWRVSLTDTFGRKAVRDLMAAVPGT-AAEQAAKKADPVDVDAIAAA 428 Query: 323 AIAGLSERKVQFTYTDVLARTVGILPPENGVIERAR------------------------ 358 + + + + +T ++ A E+GV A Sbjct: 429 VVDRVGQNRSTWTVWNLRAEAERAARIEHGVSTPAEHQELVSAIVAAAVSPAHSIRVDAP 488 Query: 359 AGIDE----AISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTV------- 407 A +DE + + + + FTS + E + + Sbjct: 489 ALLDEPASLRRADRESVFTEHGAAKFTSAAILAAETRLVEAATTRTAFGATAARVGAVLD 548 Query: 408 --HPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQI 465 V AG + A D + G G +G+ + G+ + Sbjct: 549 GFEARSGVRLDAGQHHMATAFAVDDRLVVAGIGPAG-SGKTTAMRAYAEAVAASGQRLIP 607 Query: 466 IAADRRSQMNMKQDERLSGELITGRRQ----------------------LLEGMAFTPGS 503 +A + + +D E + G A PG Sbjct: 608 LATSSAAADVLARDLGAKAENLHKFLHEYSDAPTAGASKALWNGTGIPAWARGFALRPGD 667 Query: 504 TVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMKDAGVNTYRWQGG 563 V+VD+ L+ AA V + ++ G + A++ Q G Sbjct: 668 VVLVDEAGMAGTFNLDRLVQIAAHRGAVVRLLGDYRQLGAVESGGALR-----LIANQAG 722 Query: 564 EQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGV 623 +T+ + A L S + A + +A + KT + Sbjct: 723 AVELSTLHRFNNPREAEATLKVRVGDSSALDFYADAGRIRSGSAQGMIEAAYAGWKTDML 782 Query: 624 LGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTL 683 G + A + ++ D G V R + + + Sbjct: 783 AGKKTIMAAATTADVTALSAQARLDRIEAGHV-------EADGARLRDGNLAGRGDWIVT 835 Query: 684 RDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSED 743 RD + +V R V GD V D Sbjct: 836 RDNDRKNKVSRGRDW------------------------------VKNGDAWTVTKRHRD 865 Query: 744 AMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLN 803 V + ++ ++L + T +T Sbjct: 866 GSLTVKNIEHQGTVRLSAEYVSAHVELLYATTTNRAQGSTVD-TAHPLITAEMSRENLYV 924 Query: 804 GLARSGRDVRLYSSLDETRTAEKLARHP 831 L+R+ LY E ++ R Sbjct: 925 ILSRAQERTSLYVETHELLPFDEDDRLD 952 Score = 132 bits (332), Expect = 1e-28, Method: Composition-based stats. Identities = 166/1253 (13%), Positives = 319/1253 (25%), Gaps = 113/1253 (9%) Query: 567 PATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGL 626 A I R AR A V A +S A V + E+ + A+R + L Sbjct: 146 EAEIKKIHTEESRRARAAVAGFDLVFAPVKSAALVWALDERPEVRAAVREAHEAARDAAL 205 Query: 627 PEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSL--TLR 684 + A + + ++ + + ++++ + R Sbjct: 206 EILETHAAYTRTGRGGIAQIETRGLVAARFDHFDSRAGDPNLHTHVAISSKVQGVDGIWR 265 Query: 685 DAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDA 744 ++ ++ ++ G + T + G R V ++ Sbjct: 266 SLDARALYKMTVAVSEFYNTRFETELTTRTG--VSWTERPDTT----GKREPVREIAGID 319 Query: 745 MTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNG 804 +V + + L G+ G+ S + + Sbjct: 320 PKMVAHFSSRRTEIEARYEQ-----LLRGFRREHGYDPSRAVCHDLARQANLETREGKKA 374 Query: 805 L---ARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALH 861 A D R+ + R A + +EQ +A ++ + + Sbjct: 375 PRSLAEMREDWRVSLTDTFGRKAVRDLMAAVPGTAAEQAAKKADPVDVDAIAAAVVDRVG 434 Query: 862 TPAQQAIHLALPVVESKKLAFSM--------VDLLTEAKSFAAEGTGFTELGG--EINAQ 911 L + +L++ + A + ++ Sbjct: 435 QNRSTWTVWNLRAEAERAARIEHGVSTPAEHQELVSAIVAAAVSPAHSIRVDAPALLDEP 494 Query: 912 IKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHIL------EGKEAVMPLMERVPGEL 965 V +G S A AE ++ V +++ Sbjct: 495 ASLRRADRESVFTEHGAAKFTSAAILAAETRLVEAATTRTAFGATAARVGAVLDGFEARS 554 Query: 966 MEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGP 1025 +L +GQ G AG GKTT RA AV + R++ L Sbjct: 555 GVRLDAGQHHMATAFAVDDRLVVAGIGPAGSGKTTAMRAYAEAVA----ASGQRLIPLAT 610 Query: 1026 THRAVGEM-RSAGVDAQTLASFLHDTQLQQRSGET----------------PDFSNTLFL 1068 + A + R G A+ L FLH+ +G + + L Sbjct: 611 SSAAADVLARDLGAKAENLHKFLHEYSDAPTAGASKALWNGTGIPAWARGFALRPGDVVL 670 Query: 1069 LDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKE 1128 +DE+ M G ++ R + A G GD QL A+ G RL ++ A + Sbjct: 671 VDEAGMAGTFNLDRLVQIAAHRGAVVRLLGDYRQLGAVESGGALRLIANQAGA--VELST 728 Query: 1129 IVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPE----HSVTEFSHSQE 1184 + R + AL + +G + Sbjct: 729 LHRFNNPREAEATLKVRVGDSSALDFYADAGRIRSGSAQGMIEAAYAGWKTDMLAGKKTI 788 Query: 1185 AKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMI 1244 A L +A D + A IVT N+ + ++ Sbjct: 789 MAAATTADVTALSAQARLDRIEAGHVEADGARLRDGNLAGRGDWIVTRDNDRKNKVSRGR 848 Query: 1245 HDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAG--ISK 1302 V+ ++ L NI RLS +L +R G + Sbjct: 849 DWVKNGDAWTVTKRHRDGSLTVKNIEHQGTVRLSAEYVSAHVELLYATTTNRAQGSTVDT 908 Query: 1303 DDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVW 1362 LIT + + N +I R + + T + + DR+ K+D + + Sbjct: 909 AHPLITAEMSRENLYVILSRAQERTSLYVETHELLPFDEDDRLDRVKNDPRQFAAREVLT 968 Query: 1363 TVTAVSGDSVTLSDGQQTREIRPGQE----QAEQH-----IDLAYAITAHGAQGASE--- 1410 + G+ ++ ++ + G QH + AY + + Sbjct: 969 AILNREGNEISATEAIAASQQAAGSLATIAPRFQHALETAVRPAYKELVYK----TFTVD 1024 Query: 1411 ------TFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKG 1464 +I G + N + Sbjct: 1025 DGTETGDTSIPDAIATGPGYAKLRRTLL------ASDQA---GHSPAALLARAANDI--- 1072 Query: 1465 TAHDVFEPKPDREVMNAERLFSTARELRDVAAGRA-VLRQAGLAGGDSPARFIAPGRKYP 1523 D + ++ + AR + + R + PA + P Sbjct: 1073 -------GITDADSLSEQPAADLARRINTLLDLRHTAAPEQDRRPARLPAWYSIPTAADV 1125 Query: 1524 QPYVALPAF--DRNGKSAGIWLNPLTTDDGNGLRGFSGEGRVKGSGDAQFVALQGSRNGE 1581 +P + A + G V A + Sbjct: 1126 SAAADIPPYLRHAQDVIASRVDQLADIALAERPAWLTALGPVPDDEHAVTDWRR-----H 1180 Query: 1582 SLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPGAITGGRVWGDIPDNSVQPGAGNGE 1641 +D +I D+P + + P V N + + E Sbjct: 1181 VAAVAAYRDQHQITSDDPRQVLGSHSDADDVSGTPYRHALQAVLAARDINHLDDHSDPRE 1240 Query: 1642 PVTAEVLAQRQAEEAIRRETERRADEIVRKMAENKPDLPDGKTEQ---AVREIAGQERDR 1698 RQ + ++ + A+ +P L E A+ + Sbjct: 1241 IYRTLPQGARQRVDLTLTDSLGALFLVAGASAQERPALLPEHVEHLRLALLAHGHLGQRE 1300 Query: 1699 AAITEREAALPEGVLREPQRVREAVREIARENLLQERLQQMERDMVRDLQKEK 1751 + + P V R A R+ R + L D Q+ + Sbjct: 1301 QSQADDGTPSPRPVEMSLADRRRATRDAERAARRERVLSGQGPDRTSSRQQRR 1353 >UniRef50_B9NXA5 Putative MobA/MobL protein n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NXA5_9RHOB Length = 3238 Score = 259 bits (661), Expect = 6e-67, Method: Composition-based stats. Identities = 230/1621 (14%), Positives = 432/1621 (26%), Gaps = 260/1621 (16%) Query: 242 REAVGEDASLK--SRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRA 299 R E A+ + + A L R + ++ + + D A ++ Sbjct: 186 RSWRMEWANAANIALERAGLHQRIDHRTLEEQGIELKPDTYNPHVAEHAEQSGDLAREK- 244 Query: 300 DLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARA 359 + ++ + +S + F+ D+ L +N + + Sbjct: 245 ---DRITQVRRDNAAYLRAHPEHVLTVVSAKATIFSEQDIKNEFKRRL--DNAAPDEIMS 299 Query: 360 GIDEAISREQLIPLD--------REKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEK 411 +D A++ +L+ LD + T+ E ++ ++ + +Q+ ++ Sbjct: 300 LVDAAMASRELVQLDCTIEDRAGEKWPGLTTRARAYRERNLVLDAKVLARQSLNVDGSDR 359 Query: 412 SVPRTAGYSDAVSVLA---QDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAA 468 + G + A L++V+G GG G+ + + + + +G EV A Sbjct: 360 LDLLSEGLRETQRNAALEMVSPDRLSLVTGYGGV-GKTYTIGQAAKVWKARGYEVLGGAI 418 Query: 469 DRRSQMNMKQDERLSGELITGR--RQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAA 526 ++ + + + R + +D+ + + +L + Sbjct: 419 SGKATQELSTIPEMEIASLAAWESRWARGALPVQGKFVFFLDEIGMVGGDTLVRVLKRVS 478 Query: 527 RHNVQVLITDSGQRTGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGD 586 +++++ G L + D+ + + E P + + RY R A Sbjct: 479 DMGGKLIVSGD------GEQLQPVMDSSIVDALLEVKE--PVLMDQIVRQKNRYQREASR 530 Query: 587 FAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYL 646 A G L R L E T AL + D+ Sbjct: 531 QLAQ-----------GGKHIDHALDYYSREGHIHF--LENNEETFAALVQRYFDTP---- 573 Query: 647 RDMYRPGMVMEQWNPETRSHDRYVIDRVTAQS--HSLTLRDAQGETQVVRISSLDSSWSL 704 G E+ + D + + + + L + + E + + Sbjct: 574 -----VGHSSERIAGAVSNRDVWALQDLLRAEAINRGVLGEREQELGEIIRIDHRGLRDV 628 Query: 705 FRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSP 764 + V +GERL T L + V ++ A+ +++ P + + Sbjct: 629 RLKLPLLVREGERLIFTASHRELGIPKSSMGTVVAMPYKALDILLDDTDTPVRVHLE--A 686 Query: 765 FTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTA 824 F + +S + +M + R V LY S T Sbjct: 687 FNSFDYAYAATIHKMQGMSKERIHILAHPRM-NRYLGNVAMTRHEEGVDLYVSETRIETL 745 Query: 825 EKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAI---------------- 868 E L + + +S L I Sbjct: 746 EDLKDLFGTKSHLWIDGSETPDELRRAGTGLAESGLAKDRLDLIPASETVQKLVRERFIG 805 Query: 869 -------------------------------------HLALPVVESKKLAFSMVDLLTEA 891 + + ++ F D+ Sbjct: 806 DPHLSGIASRVGGLLSAEFVDGDPILEEDPQGYAQDPWRVIDEMMERQAVFRATDVADAL 865 Query: 892 KSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLV-SRASYEAEKSILRH---- 946 + F ++ DL+ +D G G + +R E +L Sbjct: 866 SQITKDPETF---LRLFKQAMEHPDLVILDEGGRNGEGRIYSTRTQVAQEMDVLDRGVRL 922 Query: 947 ----------------ILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVV 990 + + LT Q AA R ++ ++V Sbjct: 923 SLLEHLPHAGTDRSKAFGQSLHGIGEEALLSAEIQTSDLTPEQEAAFRAAIDQP-GLSLV 981 Query: 991 QGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVDAQTLASFLHDT 1050 G +G GKT A+ V + PT V +R G D A + Sbjct: 982 SGPSGSGKTRVAGALARVYRAAGV---KEVNAIAPTSAGVDRLRRTGEDG---AMSIRQF 1035 Query: 1051 QLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQ 1110 + + G ++ +LD++ +VG R L G + VA DT Q A+ Sbjct: 1036 EERVADGRIALMPRSVIVLDDAGLVGAETADRLIGLAETHGSKIVALRDTHQFAALEASP 1095 Query: 1111 PFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAW 1170 FR+ + R + + +RQ R+ + L +G Sbjct: 1096 IFRMLEDRVGG--HRLGDSLRQVDPARK-----------QMLEEFRQAPTGVPGDPQGEG 1142 Query: 1171 APEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIV 1230 E + + E + AM + ++Y ++ L+V Sbjct: 1143 PAERGLATLMTEGVFQAGETRDLAM--------------NRVAQNYVRDAVASK---LVV 1185 Query: 1231 THLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLV 1290 D LN +I + + E+ + + E S +L+ Sbjct: 1186 AQTRSDVNELNRLIREKMDAR---YPERTIKASPFGTTDKLAEAPVGSIAALRPGDRILL 1242 Query: 1291 DNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKS 1350 Y + +G + D G L++ + Sbjct: 1243 SGGYFGANLPAGSEGEVLRHDDNGVALLMAAPDGTERH---------------------- 1280 Query: 1351 DRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASE 1410 +T S + R +A T HGA G Sbjct: 1281 ---------------------LTFSVEDRDFRYRF-----------GFASTVHGADGRGH 1308 Query: 1411 TFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYT----DNRQGWTDAINNAVQKGTA 1466 L R ++ A+S + + V DN AI T Sbjct: 1309 GSVHVLATPGMTRHVLDA------AMSLHQTALNVVLPVPEDNLGRAVRAIQRKDG--TG 1360 Query: 1467 HDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPARFIAPGRKYPQPY 1526 + D + E L A ELR+ A R A G ++ ++P P Sbjct: 1361 RGALDYGFDVSLAAREALRGQAVELREDAIVEGAERLALWMGPET----VSPETDIPD-- 1414 Query: 1527 VALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGEGRVKGSGDAQFVALQGSRNGESLLAD 1586 PA + G + L G ++ +G A A+ + Sbjct: 1415 --TPAPELIGPTDVPPARALPHGIGGEAMAELIGAQILETGAAPTNAVHSALIDMVRHVA 1472 Query: 1587 NMQDGVRIARDNPDSGVVVRIAGEGRPWNPGAITGGRVWGDIPDNSVQPGAGNGEPVTAE 1646 + R P PG+ V GE AE Sbjct: 1473 EEDGWQILRRRLPPGAEARADQLALDRVGPGSDGRSLPAALALARGVVAAEALGEDALAE 1532 Query: 1647 VLAQRQAEEAIRRETERRADEIVRKMAENKPDLPDGKTEQAVR--EIAGQERDRAAITE- 1703 + R E RR I +LPD ++ E RAA Sbjct: 1533 RFQRGLDLYGARAEEARRGPGIEGLEPRLVDELPDPWSQAPAPVLESPASVEIRAANAAF 1592 Query: 1704 ---------REAALPEGVLREPQRVREAVREIARENLLQERLQQMERDMVRDLQKEKTLG 1754 A + E + VR A + L ++ DM +Q +T Sbjct: 1593 LRAHPEHMLSLVAAERAIFTEEELVRSAGSYLEAGRGEARDLAELVLDMPEVVQIAQTGP 1652 Query: 1755 G 1755 G Sbjct: 1653 G 1653 Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats. Identities = 143/1180 (12%), Positives = 329/1180 (27%), Gaps = 136/1180 (11%) Query: 198 RLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVEAFSGRSQTIREAVGEDASLK--SRD 255 ++ R +L EA + + + +P R EA+GEDA + R Sbjct: 1478 QILRRRLPPGAEARADQLALDRVGPGSDGRSLPAALALARGVVAAEALGEDALAERFQRG 1537 Query: 256 VAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPD 315 + R + P I+ E + + A + + + Sbjct: 1538 LDLYGARAEEARRGPGIEGLEPRLVDE-----LPDPWSQAPAPVLESPASVEIRAANAAF 1592 Query: 316 VQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPL-- 373 ++ ++ ++ + FT +++ L G AR + + +++ + Sbjct: 1593 LRAHPEHMLSLVAAERAIFTEEELVRSAGSYLEAGRG---EARDLAELVLDMPEVVQIAQ 1649 Query: 374 --DREKGLFTSGIHVLDELSVR----ALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLA 427 + +++G E+ + A++ D + S T G + Sbjct: 1650 TGPGGQAQYSTGARSAVEMDLISRGVAMATDRFDVDEQAHLDLLSPSLTKGQRPGALAML 1709 Query: 428 QDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDE-RLSGEL 486 + L +V+G G AG+ + E + + +G EV A+ ++ D + Sbjct: 1710 DAK-RLTLVTGDPG-AGKSYVIGEAAKVWQARGYEVIGGASSGPITQDLATDVKHMDVAT 1767 Query: 487 ITGRRQLLEG--MAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVL-ITDSGQRTGT 543 + E + +D+ + + +++ + GQ T Sbjct: 1768 LAAWEARWERGWRPASGRFVFFMDEAGMVGGDTWARVQKRIDALGGKLVAVGGPGQLQPT 1827 Query: 544 G--SALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQV 601 SA + + + + R + + +A ++ + Sbjct: 1828 SESSAQLVLMEQEQIGFTAMYEVIRQENHLERHASKQLEEGGSEAISALRFYHDKGDIRF 1887 Query: 602 SGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNP 661 + + I +G + + + Y V Sbjct: 1888 --TEDVSGAIAQIAQRYFERG------------------APDKRIALAYTNRDVWALNAA 1927 Query: 662 ET-RSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRV 720 + R + + GE + L + G+R+ Sbjct: 1928 LRSEAGQRGELQGPERDCGEIVRILRDGERERKIHLPLK------------LRTGDRIMF 1975 Query: 721 TGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGH 780 T GL + V ++ + +++ P T+ ++ F++ Sbjct: 1976 TASHRGLGIPKSSFGTVQAIRAQQVDILIDKHTRPVTVDLN--EFSSFDYGYATTVHKSQ 2033 Query: 781 SVSDSAT------------VFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLA 828 +S + T+ R L +++ + Sbjct: 2034 GMSKDYVYGLGHGYMNRHVLTVMATRHHQAFELYAPKDRLEDMAALEAAMLRSAYLRLDD 2093 Query: 829 RHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIH----------LALPVVESK 878 T + + + + + + L + +A + Sbjct: 2094 PDADPTSPALSPRRSSPGLATPGVVEPRADLLPEDTPAPVVAFEADAHLSGVANRISGLL 2153 Query: 879 KLAFSM--------------------VDLLTE---------AKSFAAEGTGFTELGGEIN 909 K F+ DLL + A + Sbjct: 2154 KAEFTQGQALVGEDPWGYTSSPAKVVDDLLKQQSTLRAADVAGALTRVTQHPATFLRLFR 2213 Query: 910 AQIKRGDLLYVDVAKGYGTGLLV-SRASYEAEKSILRHILE--------GKEAVMPLMER 960 ++ DL+ + G G + +++ E ++ L G++ +P + Sbjct: 2214 EAMQHPDLIIISDEGIGGEGRIYSTKSQVAFEAGVVDQGLRLGLSTHLPGRDVKVPRPDG 2273 Query: 961 VPGELMEK---LTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESER 1017 + + + + L Q A R + S R ++V+G +G GKT + Sbjct: 2274 ILLDQLVRRHGLDEQQAKALRDVANGS-RLSLVRGASGSGKTRLASTLAKGYREAGSD-- 2330 Query: 1018 PRVVGLGPTHRAVGEMRSAG-VDAQTLASF--LHDTQLQQRSGETPDFSNTLFLLDESSM 1074 V L PT +G +R AG ++ F L + + ++ +LD++ Sbjct: 2331 -HVYTLAPTGAGLGALREAGERRVFSVRHFTELASAGPKGADPVLSLTAGSMIVLDDAGQ 2389 Query: 1075 VGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTP 1134 + R + L+ G + V D +Q G +++ + R + + RQ+ Sbjct: 2390 LDVEAANRLFDLVDKSGAQLVLLADPEQPGPFGAGSVWQMLEARMG--SIALGDSHRQSD 2447 Query: 1135 ELREAV--YSLINRDVERALSGLESVKPSQVPRQEG-AWAPEHSVTEFSHSQEAKLAEAQ 1191 ERA GL++++ + V + G + A ++ + + A Sbjct: 2448 PGLAKALFDLAAPEQGERAAQGLKALEAAGVFQAGGTSHATIETLARDYVADGSGTKSAL 2507 Query: 1192 QKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKA 1251 + + E + I+ + A+ + DR L Sbjct: 2508 AWSGAEVEKLNTAIRAELDEIMPERAAFKDTAQHAGPVAALQVGDRIALTEYYDAAALGP 2567 Query: 1252 GELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVD 1291 G +G +R D Sbjct: 2568 GSIGDVVARDAERVRIRLRRPGGAEKEVVFKGEDEAFRYR 2607 Score = 180 bits (455), Expect = 6e-43, Method: Composition-based stats. Identities = 139/884 (15%), Positives = 258/884 (29%), Gaps = 139/884 (15%) Query: 740 VSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDN 799 + G + A +L V S A + + +A + Sbjct: 1465 IDMVRHVAEEDGWQILRRRLPPGAEARADQLALDRVGPGSDGRSLPAALALARGVVAAEA 1524 Query: 800 ATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSA 859 + LA + + +++ + S Sbjct: 1525 LGEDALAERFQRGLDLYGARAEEARRGPGIEGLEPRLVDELPDPWSQAPAPVLESPASVE 1584 Query: 860 LHTPAQQAIHLALPVVES----KKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRG 915 + + + S ++ F+ +L+ A S+ G G E+ + Sbjct: 1585 IRAANAAFLRAHPEHMLSLVAAERAIFTEEELVRSAGSYLEAGRGEARDLAEL--VLDMP 1642 Query: 916 DLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGK-EAVMPLMERVPGELMEKLTSGQR 974 +++ + G + A E ++ + + + L LT GQR Sbjct: 1643 EVVQIAQTGPGGQAQYSTGARSAVEMDLISRGVAMATDRFDVDEQAHLDLLSPSLTKGQR 1702 Query: 975 AATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMR 1034 +L+ R T+V G G GK+ ++ V+G + ++ Sbjct: 1703 PGALAMLDAK-RLTLVTGDPGAGKSYVIGEAAKV----WQARGYEVIGGASSGPITQDLA 1757 Query: 1035 SAG--VDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGG 1092 + +D TLA++ + R +F +DE+ MVG AR I A GG Sbjct: 1758 TDVKHMDVATLAAWEARWERGWRPASGRF----VFFMDEAGMVGGDTWARVQKRIDALGG 1813 Query: 1093 RAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERAL 1152 + VA G QLQ + + + M E++RQ L + A+ Sbjct: 1814 KLVAVGGPGQLQPTSESSAQLVLMEQEQIGFTAMYEVIRQENHLERHASKQLEEGGSEAI 1873 Query: 1153 SGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAI 1212 S L F + I Sbjct: 1874 SALR-----------------------------------FYHDKGDIRFTEDVSGAIAQI 1898 Query: 1213 VRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDG 1272 + Y R + + + N D LN+ + + GEL + + Sbjct: 1899 AQRYFERGAPDKRIA--LAYTNRDVWALNAALRSEAGQRGELQGPERDCGEIVR------ 1950 Query: 1273 ELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLY 1332 L+D E ++ P Sbjct: 1951 -----------------------------------ILRDGERERKIHLP----------- 1964 Query: 1333 TPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQ 1392 +++ TGDR+ FT S R G +S TV A+ V + + TR + Sbjct: 1965 ----LKLRTGDRIMFTASHRGLGIPKSSFGTVQAIRAQQVDILIDKHTRPVT-VDLNEFS 2019 Query: 1393 HIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTD-NRQ 1451 D YA T H +QG S+ + L NR ++ V +R Q ++Y +R Sbjct: 2020 SFDYGYATTVHKSQGMSKDYVYGLGHGYMNRHVLT------VMATRHHQAFELYAPKDRL 2073 Query: 1452 GWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDS 1511 A+ A+ + + +P D S R +A V +A L D+ Sbjct: 2074 EDMAALEAAMLRSAYLRLDDPDAD----PTSPALSPRRSSPGLATPGVVEPRADLLPEDT 2129 Query: 1512 PARFIAPGRKYPQPYVALPAFDRNGKSAGIW--LNPLTTDDGNGLRGFSGEGRVKGSGDA 1569 PA + AF+ + +G+ ++ L + + GE + Sbjct: 2130 PAPVV--------------AFEADAHLSGVANRISGLLKAEFTQGQALVGEDPWGYTSSP 2175 Query: 1570 QFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRP 1613 V + +L A ++ + +P + + + P Sbjct: 2176 AKVVDDLLKQQSTLRAADVAGALTRVTQHPATFLRLFREAMQHP 2219 Score = 50.0 bits (117), Expect = 8e-04, Method: Composition-based stats. Identities = 48/319 (15%), Positives = 89/319 (27%), Gaps = 18/319 (5%) Query: 1320 SPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQ 1379 P A + + + GDR+ T+ S+ V A + V + + Sbjct: 2529 MPERAAFKDTAQHAGPVAALQVGDRIALTEYYDAAALGPGSIGDVVARDAERVRIRLRRP 2588 Query: 1380 ---TREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVAL 1436 +E+ E A+A T HGA+ L E + Sbjct: 2589 GGAEKEVVFKGEDEAFRYRFAFASTVHGARCLDHGSVHLLVNPAM------SREVLNTGM 2642 Query: 1437 SRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAA 1496 + K + V + ++ + + + A R + LR + Sbjct: 2643 ALHKDRLNVMVPASEDRHISVVRKILQTDGRARGALDYGFDPALAMRQAAGGETLRLEGS 2702 Query: 1497 GRAVLRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRG 1556 A G+ A I P P D K G + +GLR Sbjct: 2703 DGLPAGVGAEAIGEVMAGAIRETGTAPAP-------DIRHKLDGFVRQAIRLQRKSGLRQ 2755 Query: 1557 FSGEGRVKGSGDAQFVALQGSRNGESLLAD-NMQDGVRIARDNPDSGVVVR-IAGEGRPW 1614 + + + R+G++L A + V +A ++ +V +G Sbjct: 2756 RGTKDLLARAEHLALSTAGPGRDGKALPAALVLARAVELAETQGEADLVTHFRSGLDLYA 2815 Query: 1615 NPGAITGGRVWGDIPDNSV 1633 I + + V Sbjct: 2816 EQAHIARAGPGIETLEARV 2834 >UniRef50_A6YFT0 Putative TraA n=1 Tax=Arthrobacter sp. Chr15 RepID=A6YFT0_9MICC Length = 1097 Score = 259 bits (661), Expect = 6e-67, Method: Composition-based stats. Identities = 119/911 (13%), Positives = 238/911 (26%), Gaps = 136/911 (14%) Query: 8 RSAGSAGNY----YTDKDNYYVLGSMGERWAGRGAEQL--GLQGSVDKDV------FTRL 55 + SA Y + D YY+ G+ AE+ G GS+D + Sbjct: 34 GTGASATAYLESDHHRADEYYLEED------GQLAERFVYGPSGSLDATDSLDAARYKLW 87 Query: 56 LEGRLPDGADLSRMQDGSNRHR-------------PGYDLTFSAPKSVSMMAMLGGD--K 100 ++ PD ++ G R R ++T + KS+S+ A L Sbjct: 88 VDWVDPDTGEVRGKPKGQARLRQDDGVVRDLPASPRFAEMTVNCDKSLSVAAALNPAVIA 147 Query: 101 RLIDAHNQAVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHA 160 L +A +A V A TRV V H TSR +P H H Sbjct: 148 ALDEAQREAAQAMSDFVAENAVTRVGPMRNQRLVKVERFESVAVVHKTSRAGDPHRHIHV 207 Query: 161 VVANVTQHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGK 220 G+W+ L + K E L+ + G+ + Sbjct: 208 QWNTRVFAEGKWRGLWTTPTLKQQGALRGIGESTIRS---HEGLRTALAQAGFTFD-TAT 263 Query: 221 HGMWEMPGVPVEAFSGRSQTIRE------------AVGEDASLKSRDV----AALDTRKS 264 + E+ E S R ++E G++ S + R + A R Sbjct: 264 GKVVELSA-HAELLSKRRAQVQENIARLEAAWRENHPGQEPSPEQRRIFDFQAWALDRPG 322 Query: 265 KQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAI 324 K+ + E+ A W++ L+ G + + + LR L + V + + A Sbjct: 323 KKAKNREVSQAGWIEELRAAGLPVAGFDGGSSAVRFLRDLDQEQIAAAAIAVCEGKSSAW 382 Query: 325 AGLSERKVQFTYTDVLARTVGILPPENGVIERARAGI--DEAISREQLIPLDREKGLFTS 382 + + + AR +IS + + TS Sbjct: 383 SLHQLQAAVADQVAEAGVIAERAELNAFISATARNAAQGARSISDPRDGHMPDHVRHITS 442 Query: 383 GIHVLDELSVRALSRDIMKQN-RVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGG 441 + E ++A + V + P + G + + V Sbjct: 443 ERVIAVEDELKARFTARVVAGEEVHLDPGAFAATSLGQAQKHAAQIVASGCGLGVVEGAA 502 Query: 442 AAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQL-------- 493 +G+ + E + +GR++ ++A + + + + Sbjct: 503 GSGKTTMLREAKKLLDAEGRQLVVLAPTLKGAQEAARSLEAAAFSVHKLLHANGFRWDEN 562 Query: 494 ----------------------LEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQ 531 T + V+VD+ L L L A ++ Sbjct: 563 GRYTRLKPGETDPNTGKMYRGPQGDYRLTKEARVVVDEAGMLDQDTALALTQLADQYGAG 622 Query: 532 VLITDSGQRTGT---GSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFA 588 +++ + G L V + +E +R + + Sbjct: 623 LVLMGDRAQLPAVGRGGVLDHAAKIAVERADIDVVHRFTDAQYAELSLRMRSRQKPAELF 682 Query: 589 ASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRD 648 + +T ++T G + + + + + Sbjct: 683 NDLYTRGHVRIHTGVEEAVEAMTADAAQTIRTGGTVA-------------MATPTNEMAT 729 Query: 649 MYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPE 708 M + + R+ I V Sbjct: 730 QINAVMQQQMSDAGRTREARFKIAGVD--------------------------------- 756 Query: 709 KMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTAL 768 + + G+ + L V+ + V + D V G+ + + + Sbjct: 757 GLTLRHGDTIMTRNNDTMLGVANRETYTVHTTHSDGSITVNQGKGKDMIRLPKEYVTQYV 816 Query: 769 KLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLA 828 L E +++ + T R L+ T A+ Sbjct: 817 HLGYASTEYGAQGATETTGGGLLDATSSSAGGTYVAATRGREANTLHMVAASTEDAQAQF 876 Query: 829 RHPSFTVVSEQ 839 +++ Sbjct: 877 VDIMGRDTADR 887 Score = 123 bits (307), Expect = 8e-26, Method: Composition-based stats. Identities = 89/513 (17%), Positives = 143/513 (27%), Gaps = 81/513 (15%) Query: 863 PAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELG---------GEINAQIK 913 +Q A+ V E K A+S+ L AE E AQ Sbjct: 363 DQEQIAAAAIAVCEGKSSAWSLHQLQAAVADQVAEAGVIAERAELNAFISATARNAAQGA 422 Query: 914 RGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQ 973 R D + S E + A + L Q Sbjct: 423 RSISDPRDGHMPDHVRHITSERVIAVEDELKARFTARVVAGEEVHLDPGAFAATSLGQAQ 482 Query: 974 RAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM 1033 + A I+ + VV+G AG GKTT R L ++E ++V L PT + E Sbjct: 483 KHAA-QIVASGCGLGVVEGAAGSGKTTMLRE----AKKLLDAEGRQLVVLAPTLKGAQEA 537 Query: 1034 RSAG-VDAQTLASFLHDTQLQQR------------------------SGETPDFSNTLFL 1068 + A ++ LH + G+ + Sbjct: 538 ARSLEAAAFSVHKLLHANGFRWDENGRYTRLKPGETDPNTGKMYRGPQGDYRLTKEARVV 597 Query: 1069 LDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKE 1128 +DE+ M+ L G V GD QL A+ G Sbjct: 598 VDEAGMLDQDTALALTQLADQYGAGLVLMGDRAQLPAVGRGGVL---------------- 641 Query: 1129 IVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLA 1188 A +E V R A E S+ S++ Sbjct: 642 -------------------DHAAKIAVERADIDVVHRFTDAQYAELSLR--MRSRQKPAE 680 Query: 1189 EAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVR 1248 EA+ D +T + T NE +N+++ Sbjct: 681 LFNDLYTRGHVRIHTGVEEAVEAMTAD-AAQTIRTGGTVAMATPTNEMATQINAVMQQQM 739 Query: 1249 EKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLIT 1308 AG + + + ++ +R G+ + + D ++ V N + DG IT Sbjct: 740 SDAGRTREARFKIAGVDGLTLRHGD----TIMTRNNDTMLGVANRETYTVHTTHSDGSIT 795 Query: 1309 LQDAEGNTRLISPREAVAEGVTLYTPDTIRVGT 1341 + +G + P+E V + V L T Sbjct: 796 VNQGKGKDMIRLPKEYVTQYVHLGYASTEYGAQ 828 Score = 69.3 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 64/514 (12%), Positives = 139/514 (27%), Gaps = 36/514 (7%) Query: 1172 PEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVT 1231 + + + +LA+ ++ +P ++ E + ++ Sbjct: 600 EAGMLDQDTALALTQLADQYGAGLVLMGDRAQLPAVGRGGVLDHAAKIAVERADIDVVHR 659 Query: 1232 HLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVD 1291 + L+ + ++ A + + E T + + Sbjct: 660 FTDAQYAELSLRMRSRQKPAELF--NDLYTRGHVRIHTGVEEAVEAMTADAAQTIRTG-- 715 Query: 1292 NVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSD 1351 +A + + + T +A ++ + D + + GD + +D Sbjct: 716 ---GTVAMATPTNEMATQINAVMQQQMSDAGRTREARFKIAGVDGLTLRHGDTIMTRNND 772 Query: 1352 RERGYVANSVWTVTAV-SGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASE 1410 G +TV S S+T++ G+ IR +E Q++ L YA T +GAQGA+E Sbjct: 773 TMLGVANRETYTVHTTHSDGSITVNQGKGKDMIRLPKEYVTQYVHLGYASTEYGAQGATE 832 Query: 1411 TFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVF 1470 T L + YVA +R ++ ++ A + + D+ Sbjct: 833 TTGGGLLDATSSSAGGT-----YVAATRGREANTLHM-------VAASTEDAQAQFVDIM 880 Query: 1471 EPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPARFIAPGRKYPQPYVALP 1530 + A + A+E+ + + A + P Sbjct: 881 GRDTADRGIEAATE-ALAKEIEGLDLSMPPAPAGLPLRTEETAENLPKAPSRPLEEAGAQ 939 Query: 1531 AFDRNGKSAGIWLNPLTTDDGNGLRGFSGEGRVKGSGDAQFVALQGSRNGESLLADNMQD 1590 K T + DA ++NG S + Sbjct: 940 EQPEVDKQLRERRVASETRTYERKLAA-----WQSRRDA-----YQAKNGHSPEEWQQLN 989 Query: 1591 GVRIARDNPDSGVVVRIAGEGRPWNPGAITGGRVWGDIPDNSVQPGAGNGEPVTAEVLAQ 1650 + + N + + D S + A + + Sbjct: 990 AQAVTAHHDAKSFRETTE-----HNVASRAEQALRSDHARLSADVTTARQDLDQAGLFGK 1044 Query: 1651 RQAEEAIRRETERRADEIVRKMAENKPDLPDGKT 1684 A + R + A+ P + Sbjct: 1045 NSARRILTDAEARYEAAFGIQPAQELPLSLPWNS 1078 >UniRef50_A0R7T4 ATPase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A0R7T4_PELPD Length = 686 Score = 259 bits (661), Expect = 7e-67, Method: Composition-based stats. Identities = 102/687 (14%), Positives = 202/687 (29%), Gaps = 92/687 (13%) Query: 801 TLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSAL 860 L+ S + + E R + +P I + + + Sbjct: 71 FLSPYGLSPGLITRVYNHFEDRAIVIIKGNPYSLTHVNGIGFKKADDVALRLGTDPHDPF 130 Query: 861 HTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYV 920 A +A +S D++++A G E+ ++++ + Sbjct: 131 RLAACLQFVMASMADDSGNTLVKPEDVISQAAKELDSENGSNIERIELAGELEQMEGREE 190 Query: 921 DVAKGYGTGLLVSRASYEAEKSILRHILEGKE----------AVMPLMERVPGELMEKLT 970 V G +L + + EK I + E +E + ++ + Sbjct: 191 IVRLG---DMLALKRHHATEKRICEALRRRVELPPVPIKSPSETQRFIESIEQKIGITFS 247 Query: 971 SGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAV 1030 Q + +M+ R V GYAG GK+T +A++ + + + +V + + A Sbjct: 248 EEQVDSIKMVAA-GHRTIAVTGYAGTGKSTVSKALIQLLLSKFDED--QVCCMALSGIAS 304 Query: 1031 GEMRS-AGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAA 1089 +R+ +G ++ T+ S L + G + +LDE SMV + M + Sbjct: 305 DRIRTLSGFNSFTIHSALGWRGQEFEHGPDNQLGYQVIVLDEGSMVNSFIMRNLIEAVDR 364 Query: 1090 GGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPE--LREAVYSLINRD 1147 + GD QL I G PFR VA + I RQ+ + L + Sbjct: 365 -DAVLILMGDPGQLPPIGAGDPFRNIIESGIIPVARLTRIYRQSDDSVLSFFANDIRRGV 423 Query: 1148 VERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMT 1207 V +G + + + P + + E Q+ + EA Sbjct: 424 VP---TGYLQEEGFKDFQFVQKNLPGNYFRLSDKDKVPLREENSQRIIEFIEAKMRAISP 480 Query: 1208 LYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTA 1267 + + D+ +P + LN + V G+ + + + Sbjct: 481 YIKNPILDFQLLSPIRKGPLGTEA--------LNDVAQRVFNP----GEHEGRAVQVGSV 528 Query: 1268 NIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAE 1327 + G+ + + + YH Sbjct: 529 TFKPGDKVVHTLNRDMQIVKAHSLSDYHNNID---------------------------- 560 Query: 1328 GVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQ 1387 S + SV + D+ L I Sbjct: 561 ----------------------SSETKRVFNGSVGVILDGDSDNRELLVAYPEGFIAKYD 598 Query: 1388 EQAEQH--IDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQV 1445 +++AYA+T H QG+ F + +M + Y A++R KQ V + Sbjct: 599 SLLLSAGVLEMAYALTTHKCQGSEYRFVLIPI--SSAHTIMLTAQWLYTAVTRAKQKV-L 655 Query: 1446 YTDNRQGWTDAIN--NAVQKGTAHDVF 1470 + + A ++ T + Sbjct: 656 MVGQKYMFERACKSLTETRRTTVLEKL 682 Score = 153 bits (385), Expect = 7e-35, Method: Composition-based stats. Identities = 76/621 (12%), Positives = 174/621 (28%), Gaps = 90/621 (14%) Query: 259 LDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQ 318 L TR D I + +K + + ++AD L G D + Sbjct: 81 LITRVYNHFEDRAIVI------IKGNPYSLTHVNGIGFKKADDVALRLGTDPHDPFRLAA 134 Query: 319 AVTQAIAGLSE--RKVQFTYTDVLARTVGILPPENGV-IERARAG--IDEAISREQLIPL 373 + +A +++ DV+++ L ENG IER +++ RE+++ L Sbjct: 135 CLQFVMASMADDSGNTLVKPEDVISQAAKELDSENGSNIERIELAGELEQMEGREEIVRL 194 Query: 374 DREKGLFTSGIHVLDELSVRALSRDIMKQNRV-------------TVHPEKSVPRTAGYS 420 + H E + R ++ V ++ + + + Sbjct: 195 ---GDMLALKRHHATEKRICEALRRRVELPPVPIKSPSETQRFIESIEQKIGITFSEEQV 251 Query: 421 DAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMA--REQGREVQIIAADRRSQMNMKQ 478 D++ ++A V+G G G+ L+ + + +V +A + ++ Sbjct: 252 DSIKMVAA-GHRTIAVTGYAG-TGKSTVSKALIQLLLSKFDEDQVCCMALSGIASDRIRT 309 Query: 479 DERLSGELITGRR-QLLEGMAFTPG-----STVIVDQGEKLSLKETLTLLDGAARHNVQV 532 + I + P +++D+G ++ L++ R V + Sbjct: 310 LSGFNSFTIHSALGWRGQEFEHGPDNQLGYQVIVLDEGSMVNSFIMRNLIEAVDRDAVLI 369 Query: 533 LITDSGQR--TGTGSALMAMKDAGVNTYRWQGGEQRP--ATIISEPDRNVRYARLAGDFA 588 L+ D GQ G G + ++G+ R +++S ++R + + Sbjct: 370 LMGDPGQLPPIGAGDPFRNIIESGIIPVARLTRIYRQSDDSVLSFFANDIRRGVVPTGYL 429 Query: 589 ASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRD 648 + Q + L+ + L+ + + E Sbjct: 430 QEEGFKDFQFVQKNLPGNYFRLSDKDKVPLREENSQRIIEFI----------EAKMRAIS 479 Query: 649 MYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPE 708 Y +++ + + + + + + + Sbjct: 480 PYIKNPILDFQLLSPIRKGPLGTEALNDVAQRV-------------FNPGEHEGRAVQVG 526 Query: 709 KMPVADGERLRVTGK--------------------IPGLRVSGGDRLQVASVSEDAMTVV 748 + G+++ T RV G + D ++ Sbjct: 527 SVTFKPGDKVVHTLNRDMQIVKAHSLSDYHNNIDSSETKRVFNGSVGVILDGDSDNRELL 586 Query: 749 VPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFA-----SVTQMAMDNATLN 803 V E +A LE + T + T M Sbjct: 587 VAY-PEGFIAKYDSLLLSAGVLEMAYALTTHKCQGSEYRFVLIPISSAHTIMLTAQWLYT 645 Query: 804 GLARSGRDVRLYSSLDETRTA 824 + R+ + V + A Sbjct: 646 AVTRAKQKVLMVGQKYMFERA 666 >UniRef50_Q0RC71 Putative uncharacterized protein n=2 Tax=Frankia alni ACN14a RepID=Q0RC71_FRAAA Length = 1471 Score = 259 bits (660), Expect = 9e-67, Method: Composition-based stats. Identities = 166/936 (17%), Positives = 274/936 (29%), Gaps = 126/936 (13%) Query: 47 VDKDVFTRLLEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGD---KRLI 103 V +D R LE R P G+D+T SAPKSVS++ G D + L Sbjct: 219 VHRDELARFLEEREPPTV------------VLGFDVTASAPKSVSLLWAFGDDDLRRDLA 266 Query: 104 DAHNQAVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVA 163 +A N AVD A+ +E A ++ L F HD SR +EP LH H V+A Sbjct: 267 EAMNVAVDAAIGYLERQAGVGLVDG---HNRPGVGLAGVSFLHDISRAEEPHLHIHTVLA 323 Query: 164 NVT-----QHNG---EWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQV-EALGYE 214 N +G V +T E ++A+ G + L+ ++ G + Sbjct: 324 NAVPIPLLDEDGEPLRDGAGRPRMVWRTVDSELLHAHVKTAGYVAAAVLRHELSARRGLQ 383 Query: 215 TEVVGKHGMWEMPGVPVEA---FSGRSQTIREAVGEDA------SLKSRDVAALDTRKSK 265 V ++G+ E+ G+P + FS R I + E R+ TR K Sbjct: 384 WGPV-RNGVAELAGLPADLLAVFSSRRAQIDAELAELVASGATDGPALREAVQRGTRAPK 442 Query: 266 QHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIA 325 + L+ G+ A + P D + Sbjct: 443 RAQADAEIRTAQHARLEAAGWTAADVLAAGARTDYR----PTAIGPDDLAELAELLTGPD 498 Query: 326 GLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGL------ 379 GL+ R FT DV A+ V + ++ +L +D + Sbjct: 499 GLTARSATFTARDV-AQAVAAWGVDRLDATDIDRLTAHILADARLAMVDEDTPRRRRDPE 557 Query: 380 --FTSGIHVLDELSVRALSRDIMKQNRVTVHPE-------------------------KS 412 +T+ + E +V AL H + Sbjct: 558 PIYTTLDLLDAEDNVLALCEAGRTAYAGREHRLIGPDELEAALAGHLDPRREYGAGHVEP 617 Query: 413 VPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRS 472 DAV L + ++ G G +G+ E + LV + R+ GR V A R Sbjct: 618 AVLAVEQVDAVRALLTSTDLVRVLVGPAG-SGKTEAMRLLVAVLRDAGRTVLGAAHGGRQ 676 Query: 473 QMNMKQDERLSGELITGRRQLLEGMA-----FTPGSTVIVDQGEKLSLKETLTLLDGAAR 527 + + G ++ G LL+ + PG+ +I+D+ ++ + LL A Sbjct: 677 TEELTGRLGIDGRVVAGWLTLLDHADRPADIWPPGTMLILDEATHVTTRNAARLLRYATD 736 Query: 528 HNVQVLITDSGQRTGTGSALMAMKD--------AGVNTYRWQGGEQRPATIISEPDR--- 576 +L + G A + T Q G + Sbjct: 737 TGTVILALGDPAQLGAIGPGGWFAHLAATLPDVATLTTVHRQAGAGMNGVRAALAGLRAG 796 Query: 577 -----NVRYARLAGDFAASVKAGEESVA--QVSGVREQAILTQAIRSELKTQGVLGLPEV 629 ARLA D S+ V ++ ++ + V Sbjct: 797 APDQVRRAMARLAADGRLHRFHDRPSLLAAIVEDWHDERSTVRSAATGANRARVDANRAR 856 Query: 630 TMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGE 689 A RSR D R + P + D ++ + + L A Sbjct: 857 VGAASGADHAPGRSRRGADHSRHVDL-----PRMMAGDHGTVEWLNRAAQ-LRRMQAGEL 910 Query: 690 TQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVV 749 + + + + G L G+ + G V ++ T Sbjct: 911 DPDLFLEVAGRRFHVGDEVITLTQAGHTLIPAGRPASAYIRTGTIGTVLAIDSGPAT--- 967 Query: 750 PGRAEPATLPVS-----------------DSPFTALKLENGWVETPGHSVSDS-ATVFAS 791 R E TL V L + + T + + AT Sbjct: 968 DDRPEGRTLTVDFPGKGVVSIGWDYLTHVFPDGRDGGLTHAYAITAHKAQGSTMATARPV 1027 Query: 792 VTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLET 851 VT L+R+ D+ Y + A V + L Sbjct: 1028 VTDRTSRPGLYVMLSRARTDLAAYLIDSDELAAPGDTEDLLPVVPTRGDPLDRLAGRLAA 1087 Query: 852 AISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDL 887 + + + PA A+ +L L Sbjct: 1088 SRTDRLVQALDPAAAAVAQLRREYTLAELTALRRQL 1123 Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats. Identities = 133/837 (15%), Positives = 239/837 (28%), Gaps = 86/837 (10%) Query: 783 SDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKT 842 S A + A + ++ AT R + AE + + Sbjct: 407 SRRAQIDAELAELVASGATDGPALREAVQRGTRAPKRAQADAEIRTAQHARLEAAGWTAA 466 Query: 843 RAGETSLETAISHQKSALHTPAQ-QAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGF 901 T A+ + + ++ F+ D+ ++ + Sbjct: 467 DVLAAGARTDYRPTAIGPDDLAELAELLTGPDGLTARSATFTARDVAQAVAAWGVDRLDA 526 Query: 902 TELGGEINAQIKRGDLLYVDVA----KGYGTGLLVSRASYEAEKSIL------RHILEGK 951 T++ + L VD + + + +AE ++L R G+ Sbjct: 527 TDIDRLTAHILADARLAMVDEDTPRRRRDPEPIYTTLDLLDAEDNVLALCEAGRTAYAGR 586 Query: 952 EAVMPLMERVPGELMEKLTS----------------GQRAATRMILETSDRFTVVQGYAG 995 E + + + L L Q A R +L ++D V+ G AG Sbjct: 587 EHRLIGPDELEAALAGHLDPRREYGAGHVEPAVLAVEQVDAVRALLTSTDLVRVLVGPAG 646 Query: 996 VGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA-GVDAQTLASFLHDTQLQQ 1054 GKT R +++ + V+G R E+ G+D + +A +L Sbjct: 647 SGKTEAMRLLVAVLR----DAGRTVLGAAHGGRQTEELTGRLGIDGRVVAGWLTLLDHAD 702 Query: 1055 RSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRL 1114 R + T+ +LDE++ V + AR G +A GD QL AI PG F Sbjct: 703 RPADI-WPPGTMLILDEATHVTTRNAARLLRYATDTGTVILALGDPAQLGAIGPGGWFAH 761 Query: 1115 QQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEH 1174 + DVA + + RQ V + + + Sbjct: 762 L-AATLPDVATLTTVHRQAGAGMNGVRA----------------ALAGLRAGAPDQVRRA 804 Query: 1175 SVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLN 1234 + + + + E + D T+ A R R + + + Sbjct: 805 MARLAADGRLHRFHDRPSLLAAIVEDWHDERSTVRSAATGANRARVDANRARVGAASGAD 864 Query: 1235 EDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVY 1294 R + G V +P + + E + A L +++ Sbjct: 865 HAP---------GRSRRGADHSRHVDLPRMMAGDHGTVEWLNRAAQLRRMQAGELDPDLF 915 Query: 1295 HRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRER 1354 +AG + +I+ +A + P + + TG D Sbjct: 916 LEVAG----------RRFHVGDEVITLTQAGHTLIPAGRPASAYIRTGTIGTVLAIDSGP 965 Query: 1355 GYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAI 1414 V + + + + AYAITAH AQG++ A Sbjct: 966 ATDDRPEGRTLTVDFPGKGVVSIGWDYLTHVFPDGRDGGLTHAYAITAHKAQGSTMATAR 1025 Query: 1415 ALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKP 1474 + +R YV LSR + + Y + V + Sbjct: 1026 PVVTDRTSRPG------LYVMLSRARTDLAAYLIDSDELAA----PGDTEDLLPVVPTRG 1075 Query: 1475 DREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDR 1534 D A RL ++ + A A A L + A A R+ PA Sbjct: 1076 DPLDRLAGRLAASRTDRLVQALDPAAAAVAQLRREYTLAELTALRRQLR------PATGG 1129 Query: 1535 NGKSAGIWLNPLTTDDGNGLRGFSGEGRVKGSGDAQFVA-LQGSRNGESLLADNMQD 1590 S +GL G G+ + + + NG A++ D Sbjct: 1130 GQSSRTPSFRSRPGAHNSGLLGADGDPIIGAVSAGRGAVEVDRGANGARPGANSAGD 1186 >UniRef50_A8ZPA5 TrwC protein, putative n=1 Tax=Acaryochloris marina MBIC11017 RepID=A8ZPA5_ACAM1 Length = 657 Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats. Identities = 96/357 (26%), Positives = 162/357 (45%), Gaps = 35/357 (9%) Query: 1 MMSIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRL 60 M+S ++V S G+Y+ +D W G+GA++LGL G V + + G Sbjct: 1 MISNSKV-SGRGLGHYHARED----GQEAPGHWIGQGAKELGLNGEVKRADLEAVAHGTA 55 Query: 61 PDGADLS------RMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAV 114 P+G L R N HR G D TFS PKSVS++ ++GGDKR+I+AH AV + Sbjct: 56 PNGMRLKAKRSQWRQGSYRNGHRAGTDATFSPPKSVSIIGLVGGDKRVIEAHEHAVLDTL 115 Query: 115 RQVEALAS-TRVMTDGQSETVLTGNLVMALFNHDTSRDQE-----PQLHTHAVVANVTQH 168 +++E S ++ T G +TG L++A F+H T+R + PQ+HTH+++ N T+ Sbjct: 116 KEIEETCSIAKIRTGGIRRNEVTGKLIIAKFDHRTTRPNDQGIPMPQIHTHSLIFNSTKC 175 Query: 169 -NGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMP 227 +G+W++L + K +T ++ R Y L E+++ +GY + +++ Sbjct: 176 KDGKWRSLENWKFFRT--------DKKRLRRHYINGLGERLKEIGYRIKSERDGLHFQVE 227 Query: 228 GVPVE---AFSGRSQTIREAVGEDAS---LKSRDVAALDTRKSKQHVDPEIKMAEWMQTL 281 G+ A+S R++ I +GE A+ K AAL TR K + E +W + Sbjct: 228 GITRSQELAYSERTKEIERELGESANGVRYKKGRFAALKTRNPKVPFEHERVHKQWKEMA 287 Query: 282 KETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTD 338 G + + + Q + A +S + T Sbjct: 288 YREGIAFDRVPGLVR---TPKEIPLPTRVRLELKCLQISHRIKAQVSRVHEVWDKTH 341 >UniRef50_Q5QUQ9 ATP-dependent exoDNAse (Exonuclease V), alpha subunit, superfamily I helicase n=1 Tax=Idiomarina loihiensis RepID=Q5QUQ9_IDILO Length = 647 Score = 257 bits (656), Expect = 3e-66, Method: Composition-based stats. Identities = 81/602 (13%), Positives = 161/602 (26%), Gaps = 108/602 (17%) Query: 901 FTELGGEINAQIKRGDLLYVDVAKGYG----TGLLVSRASYEAEKSILRHILEGKEAVMP 956 F + G ++ A + + + VD G L R ++ E I + Sbjct: 93 FRQFGTDVEAALIQSHCVDVDGKGNQPLVLSDGKLYLRRYWQYEAFIENDLQARMSDRPV 152 Query: 957 LMERVPGELMEKLTS-----------GQRAATRMILETSDRFTVVQGYAGVGKTTQFRAV 1005 + + + KL QR A + +RF+V+ G G GKT + Sbjct: 153 TNDDLLKSTLAKLFDKPDGDKAEEINWQRVACANTV--RNRFSVITGGPGTGKTYTVVRL 210 Query: 1006 MSAVNMLPESERP---RVVGLGPTHRAVGEMRSAGV------------------------ 1038 ++A+ RV PT +A + + Sbjct: 211 LTALQHQTLFLGLPPLRVSLAAPTGKAAARLTESIESELNRLRGDAKLATLKDALDAIKP 270 Query: 1039 DAQTLASFLHDTQ--LQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVA 1096 + +TL L + + ++DE+SM+ M R V Sbjct: 271 EGKTLHRLLGVKPNSRAFKHHADNPLRTDVVIVDEASMIDIEMMTALLK-ATPKNARLVL 329 Query: 1097 SGDTDQLQAIAPGQPFRLQQT--RSAADVAIMKEIVRQTPELREAVYSLINRDVERALS- 1153 GD DQL ++ G + ++ + LI+ + E+ L Sbjct: 330 IGDKDQLASVEAGAVLGNLCEGADQGHYHTETAQWLQHVADTPVLPAELIDNNGEQRLQH 389 Query: 1154 --GLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEA 1211 P + A A + + K A + + + +EA Sbjct: 390 VVKFRKSYRFHGPIADLANAINRQDNAATKQELEKAKVADEDYPVSLYEVSSLDDPAFEA 449 Query: 1212 IVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRD 1271 +V+ + N + + + L + Sbjct: 450 LVKRNLTTSGSLTLHVRNNADTNSNVTKTANAEDINKLAQEALQNLSNFQILT------- 502 Query: 1272 GELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTL 1331 + V+ I G++ + Sbjct: 503 -------ALREGPWGVKAVNQKVGEILGVNANT--------------------------- 528 Query: 1332 YTPDTIRVGTGDRMRFTKSDRERGYVANSVW-TVTAVSGDSVTLSDGQQ-----TREIRP 1385 G + TK+D + T + ++ Q + +R Sbjct: 529 -------WYEGRPVMVTKNDYGLKLNNGDIGLTFKDPEHGHLRVAFPDQTNKSENKGVRW 581 Query: 1386 GQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQV 1445 HI+ YA+T H +QG+ + + + + E Y ++R K+ + + Sbjct: 582 VLPSRLTHIETVYAMTVHKSQGSEFKHTVMVLPD--HDSPVLSKELLYTGITRAKERLSL 639 Query: 1446 YT 1447 Sbjct: 640 VG 641 Score = 129 bits (324), Expect = 8e-28, Method: Composition-based stats. Identities = 61/544 (11%), Positives = 132/544 (24%), Gaps = 92/544 (16%) Query: 361 IDEAISREQLIPLDREK--------GLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKS 412 ++ A+ + + +D + G + E + + M VT Sbjct: 100 VEAALIQSHCVDVDGKGNQPLVLSDGKLYLRRYWQYEAFIENDLQARMSDRPVTNDDLLK 159 Query: 413 VPRT------------AGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQ- 459 V+ R ++++G G G+ V L+ + Q Sbjct: 160 STLAKLFDKPDGDKAEEINWQRVACANTVRNRFSVITGGPG-TGKTYTVVRLLTALQHQT 218 Query: 460 ------GREVQIIAADRRSQMNMKQDERLS-----------------------GELITGR 490 V + A ++ + + G+ + Sbjct: 219 LFLGLPPLRVSLAAPTGKAAARLTESIESELNRLRGDAKLATLKDALDAIKPEGKTLHRL 278 Query: 491 RQLLE--------GMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR-- 540 + VIVD+ + ++ LL ++ VLI D Q Sbjct: 279 LGVKPNSRAFKHHADNPLRTDVVIVDEASMIDIEMMTALLKATPKNARLVLIGDKDQLAS 338 Query: 541 TGTGSALMAMKDAGVNTYRWQGGEQRPATIISEP---------DRNVRYARLAGDFAASV 591 G+ L + + + Q + P + R + + Sbjct: 339 VEAGAVLGNLCEGADQGHYHTETAQWLQHVADTPVLPAELIDNNGEQRLQHVVKFRKSYR 398 Query: 592 KAGEESVAQVSGVREQAILTQAIRSELKTQGVL---------GLPEVTMTALSPVWLDSR 642 G + + R+ T+ + K L + AL L + Sbjct: 399 FHGPIADLANAINRQDNAATKQELEKAKVADEDYPVSLYEVSSLDDPAFEALVKRNLTTS 458 Query: 643 SRYLRDMYRPGMV---MEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLD 699 + + + + + + +G V ++ Sbjct: 459 GSLTLHVRNNADTNSNVTKTANAEDINKLAQEALQNLSNFQILTALREGPWGVKAVNQKV 518 Query: 700 SSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRL-QVASVSEDAMTVVVPGRAEPA-- 756 +G + VT GL+++ GD + V P + + Sbjct: 519 GEILGVNANT--WYEGRPVMVTKNDYGLKLNNGDIGLTFKDPEHGHLRVAFPDQTNKSEN 576 Query: 757 --TLPVSDSPFTALKLENGWVETPGHSVSDSATVFA---SVTQMAMDNATLNGLARSGRD 811 V S T ++ TV + + G+ R+ Sbjct: 577 KGVRWVLPSRLTHIETVYAMTVHKSQGSEFKHTVMVLPDHDSPVLSKELLYTGITRAKER 636 Query: 812 VRLY 815 + L Sbjct: 637 LSLV 640 >UniRef50_UPI0001C37B34 RecD/TraA family helicase n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37B34 Length = 732 Score = 257 bits (656), Expect = 3e-66, Method: Composition-based stats. Identities = 107/819 (13%), Positives = 223/819 (27%), Gaps = 134/819 (16%) Query: 665 SHDRYVIDRVTAQSHSLTLRDAQGETQVVR---ISSLDSSWSLFRPEKMPVADGERLRVT 721 + YV+ + A +T+ G+ + + + F + +L T Sbjct: 20 EANGYVVLDLDAGGELITVVGEIGDIEEGEGLILEGYYDTHRRFGTQFRAEYCERKLPDT 79 Query: 722 GKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHS 781 + G V + +V E + P+ +++ G Sbjct: 80 VVNIEKYLGSGA---VKGIGPGLAKKIVAVFGEKTLDIMEHDPYRLSEIK-GISAQKCED 135 Query: 782 VSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIK 841 +++ A S+ + + + E L +P Sbjct: 136 IANEARKLFSLRCIMSYLSGYGVKS---GIAMRTYQKYGPDAMELLKLNPYLLCGENIDL 192 Query: 842 TRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGF 901 ++ + K++ ++ + LLT+A++ G Sbjct: 193 EFKKADTIAHDLHIPKNSDKRVIAGLQYILRANTTLGHSCLPLDVLLTKAENAL--GISE 250 Query: 902 TELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPL---- 957 + NA + +L + Y AE I I K+ P Sbjct: 251 KDFYSSYNAALDDDELFEY---IKNEREYVYLPDYYYAESFIADRIKVLKDFTSPEDFDF 307 Query: 958 ---MERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPE 1014 ++ E + QR A + T ++A+ + E Sbjct: 308 DALIDIEQEEHGIEYEELQRRAITSAVSRGLMILTGGPG------TGKTTTLNAIISIFE 361 Query: 1015 SERPRVVGLGPTHRAVGEMRS-AGVDAQTLASFLH-----DTQLQQRSGETPDFSNTLFL 1068 RV+ PT RA M G +A+T+ L +L E + + Sbjct: 362 KRGLRVLLTAPTGRAAKRMSDLTGYEAKTIHRLLEVVYDKGGRLTFAHNENNPLDCDVIV 421 Query: 1069 LDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKE 1128 +DE SMV + G + + GD+DQL ++ G A V ++E Sbjct: 422 IDEMSMVDVLLFEKLLR-ALRLGCKLIMVGDSDQLPSVGAGNLLGDLIASQAVTVIKLQE 480 Query: 1129 IVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLA 1188 I RQ + + +L Sbjct: 481 IFRQARKSCIVTNAHKI-------------------------------------VSGELP 503 Query: 1189 EAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVR 1248 + +K + P + E +V R P+A + + + + Sbjct: 504 DLSRKDSDFFFFKRNSPEAVCELLVDLARTRLPKAYNYSP--------VDDIQIIAPSRK 555 Query: 1249 EKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLIT 1308 G + +++ +N + + E++ D ++ N Y I ++ G Sbjct: 556 GTLGTVEMNKLLQEKINPHDDKKPEVKGKLFTFRLGDKVMQTRNNYDIIWKKDEEQGTGV 615 Query: 1309 LQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVS 1368 G + T++ + Sbjct: 616 FNGDIGKII-------------------------NINMMTRN------------VIIDFD 638 Query: 1369 GDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAG 1428 G + I+LAYA+T H +QG I G+ + + Sbjct: 639 G------------RLTAYPFDTLDQIELAYAVTVHKSQGCEFEAVI--MPLLGSFEKLCY 684 Query: 1429 FESAYVALSRMKQHVQVYTDNRQGWTDAIN--NAVQKGT 1465 Y A++R ++ + + + + + + ++ T Sbjct: 685 RNLLYTAVTRARKLLIII-GSEEDISRMVENNRRTRRYT 722 Score = 192 bits (486), Expect = 2e-46, Method: Composition-based stats. Identities = 67/704 (9%), Positives = 171/704 (24%), Gaps = 112/704 (15%) Query: 192 NQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVE-----------AFSGRSQT 240 G +K+ + + + E+ G+ + FS R Sbjct: 91 AVKGIGPGLAKKIVAVFGEKTLDIMEHDPYRLSEIKGISAQKCEDIANEARKLFSLRC-- 148 Query: 241 IREAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRAD 300 I + + A+ T + E+ E D ++AD Sbjct: 149 IMSYLSGYG---VKSGIAMRTYQKYGPDAMELLKLNPYLLCGEN-------IDLEFKKAD 198 Query: 301 LRTLTPGPASQDGPDVQQAVTQAIAGLSE-RKVQFTYTDVLARTVGILPPENGVIERARA 359 V + + + +L + L + + Sbjct: 199 TIAHDLHIPKNSDKRVIAGLQYILRANTTLGHSCLPLDVLLTKAENAL---GISEKDFYS 255 Query: 360 GIDEAISREQLIP-LDREKGLFTSGIHVLDELSVRALSRDIMKQNRV----------TVH 408 + A+ ++L + E+ + E + + + Sbjct: 256 SYNAALDDDELFEYIKNEREYVYLPDYYYAESFIADRIKVLKDFTSPEDFDFDALIDIEQ 315 Query: 409 PEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAA 468 E + A++ + G + ++ + ++G V + A Sbjct: 316 EEHGIEYEELQRRAITSAVSRGLMILTGGPGTGKT---TTLNAIISIFEKRGLRVLLTAP 372 Query: 469 DRRSQMNMKQDERLSGELITGRRQL-----------LEGMAFTPGSTVIVDQGEKLSLKE 517 R+ M + I ++ +++D+ + + Sbjct: 373 TGRAAKRMSDLTGYEAKTIHRLLEVVYDKGGRLTFAHNENNPLDCDVIVIDEMSMVDVLL 432 Query: 518 TLTLLDGAARHNVQVLITDSGQR---TGTGSALMAMKDAGVNTYRWQGGEQRPATIISEP 574 LL A R ++++ + G G+ L + + T R A Sbjct: 433 FEKLLR-ALRLGCKLIMVGDSDQLPSVGAGNLLGDLIASQAVTVIKLQEIFRQARKSCIV 491 Query: 575 DRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTAL 634 + ++G+ + + E A+ L Sbjct: 492 TNAHKI--VSGELPDLSRKDSDFFFFKRNSPE------AVCELL---------------- 527 Query: 635 SPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVR 694 V L Y P ++ P +R ++ + + Sbjct: 528 --VDLARTRLPKAYNYSPVDDIQIIAP-SRKGTLGTVEM--------------NKLLQEK 570 Query: 695 ISSLDSSWSLFRPEKMPVADGERLRVTGKIPG----------LRVSGGDRLQVASVSEDA 744 I+ D + + G+++ T V GD ++ +++ Sbjct: 571 INPHDDKKPEVKGKLFTFRLGDKVMQTRNNYDIIWKKDEEQGTGVFNGDIGKIININMMT 630 Query: 745 MTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAM---DNAT 801 V++ P ++L A + + N Sbjct: 631 RNVIIDFDGRLTAYP--FDTLDQIELAYAVTVHKSQGCEFEAVIMPLLGSFEKLCYRNLL 688 Query: 802 LNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAG 845 + R+ + + + S ++ + R +++ + Sbjct: 689 YTAVTRARKLLIIIGSEEDISRMVENNRRTRRYTCLKKMLSTDQ 732 >UniRef50_B0MLK7 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MLK7_9FIRM Length = 753 Score = 257 bits (655), Expect = 4e-66, Method: Composition-based stats. Identities = 86/681 (12%), Positives = 178/681 (26%), Gaps = 128/681 (18%) Query: 825 EKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSM 884 E + T + + + V + Sbjct: 176 EHDSIKQIKTNPYILCTSGIDIDFRSVDRMAADLGFDAENSDRVRAGIVYVLHENANAGH 235 Query: 885 VDLLTEAKSFAAE---GTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEK 941 L TE + G + ++ ++ ++ + + K + Y AE Sbjct: 236 TCLPTEKLRESVCDNLGIERRQFESCLDDCEEKDWVVRITLGKR---EFVYLPEYYLAET 292 Query: 942 SILRHILEGKEAVMPL-------MERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYA 994 I + + + V + QRAA L S Sbjct: 293 YIAKKLAFMLRTSAQYEKDYSDEIRGVEFSENIQYEDLQRAAISACLTGSVFILTGGPG- 351 Query: 995 GVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRS-AGVDAQTLASFLH----- 1048 T ++ V + ++++ R++ PT RA M G A+T+ L Sbjct: 352 -----TGKTTTLNGVIKILKAQKKRILLCAPTGRAAKRMSDLTGEPARTIHRLLEVDFTA 406 Query: 1049 DTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAP 1108 +L+ + ET + + DE SMV M I + + GD++QL ++ Sbjct: 407 KGELKFKRNETNPLPADVVIADEMSMVDALLMCSLVRAIKPT-SKFIMVGDSNQLPSVGA 465 Query: 1109 GQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEG 1168 G + +KEI RQ + + Sbjct: 466 GNVLKDLIASHYIPSVELKEIFRQAAQSLIVTNAH------------------------- 500 Query: 1169 AWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTP--EAREQ 1226 + + L + Q ++ L + + T + Sbjct: 501 ---------RIVNGEFPVLDDRQNDFFFMNKSLESDIAGLVIQLAKQRLPDTYGFSPIDD 551 Query: 1227 TLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDA 1286 ++ AG + + LN + EL+ D Sbjct: 552 IQVLCPTKMGM-------------AGTKELNKQLQSALNPPSQNKAELKFFDVIFRTGDK 598 Query: 1287 LVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMR 1346 ++ N Y + + + G Sbjct: 599 VMQTKNDYDVLWTKNNEKGS---------------------------------------- 618 Query: 1347 FTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQ 1406 G + + +V S ++ + R E + ++ AYAIT H +Q Sbjct: 619 --------GIFNGDIGIIRSVDRFSQNVTIDFEGRVAIYTSE-MLRRLEHAYAITIHKSQ 669 Query: 1407 GASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTA 1466 G+ I + Y ++R K+ + V + + + +K Sbjct: 670 GSEYDAVIIPITAFT--HNLLYRNLLYTGVTRAKKMIIVIGT--KELVKTMVDNNRKMLR 725 Query: 1467 HDVFEPKPDREVMNAERLFST 1487 + + P ++E+ + + Sbjct: 726 YSLLRPLLEKEMNRKDTEETD 746 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 61/587 (10%), Positives = 148/587 (25%), Gaps = 89/587 (15%) Query: 293 DAADQRADLRTLTPGPASQDGPDVQQAVTQAI-AGLSERKVQFTYTDVLARTVGILPPEN 351 D + D G +++ V+ + + + + L E Sbjct: 196 DIDFRSVDRMAADLGFDAENSDRVRAGIVYVLHENANAGHTCLPTEKLRESVCDNLGIER 255 Query: 352 GVIERARAGIDEAISREQLIPLDREKGLFTS-GIHVLDELSVRALSRDIMKQNRV----- 405 + + +D+ ++ ++ + K F + L E + +++ + Sbjct: 256 ---RQFESCLDDCEEKDWVVRITLGKREFVYLPEYYLAETYIAKKLAFMLRTSAQYEKDY 312 Query: 406 -----TVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQG 460 V +++ A+S + G G+ + ++ + + Q Sbjct: 313 SDEIRGVEFSENIQYEDLQRAAISACLTGS---VFILTGGPGTGKTTTLNGVIKILKAQK 369 Query: 461 REVQIIAADRRSQMNMKQDERLSGELITGRRQL-----------LEGMAFTPGSTVIVDQ 509 + + + A R+ M I ++ P VI D+ Sbjct: 370 KRILLCAPTGRAAKRMSDLTGEPARTIHRLLEVDFTAKGELKFKRNETNPLPADVVIADE 429 Query: 510 GEKLSLKETLTLLDGAARHNVQVLITDSGQR--TGTGSALMAMKDAGVNTYRWQGGEQRP 567 + +L+ + +++ DS Q G G+ L + + R Sbjct: 430 MSMVDALLMCSLVRAIKPTSKFIMVGDSNQLPSVGAGNVLKDLIASHYIPSVELKEIFRQ 489 Query: 568 ATIISEPDRNVRYARLAGDFAASVKAGEESVAQ-VSGVREQAILTQAIRSELKTQGVLGL 626 A R + G+F + S + A L + + Sbjct: 490 AAQSLIVTNAHRI--VNGEFPVLDDRQNDFFFMNKSLESDIAGLVIQLAKQRLPDTYGFS 547 Query: 627 PEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDA 686 P + L P + + Sbjct: 548 PIDDIQVLCPTKMGMAGTKE-------------------------------------LNK 570 Query: 687 QGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPG----------LRVSGGDRLQ 736 Q ++ + S + F + G+++ T + GD Sbjct: 571 QLQSALNPPSQNKAELKFF---DVIFRTGDKVMQTKNDYDVLWTKNNEKGSGIFNGDIGI 627 Query: 737 VASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVT--- 793 + SV + V + A + L+ A + Sbjct: 628 IRSVDRFSQNVTIDFEGRVAI--YTSEMLRRLEHAYAITIHKSQGSEYDAVIIPITAFTH 685 Query: 794 QMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQI 840 + N G+ R+ + + + + + +T R + + Sbjct: 686 NLLYRNLLYTGVTRAKKMIIVIGTKELVKTMVDNNRKMLRYSLLRPL 732 >UniRef50_Q58IP1 Putative uncharacterized protein n=1 Tax=Streptomyces sp. FQ1 RepID=Q58IP1_9ACTO Length = 1430 Score = 255 bits (651), Expect = 9e-66, Method: Composition-based stats. Identities = 171/1266 (13%), Positives = 345/1266 (27%), Gaps = 156/1266 (12%) Query: 79 GYDLTFSAPKSVSMMAMLGGDK---RLIDAHNQAVDFAVRQVEALASTRV----MTDGQS 131 GYD+T K+ S L G++ L + + +E A+ + + Sbjct: 192 GYDVTLDLSKTYSAAVALAGEEMSEALRETFLEVARETFGAMEGWAAYAMAGEHGNGKTA 251 Query: 132 ETVLTGNLVMALFNHDTSRD-----QEPQLHTHAVVANVT-QHNGEWKTLSSDKVGKTGF 185 + V T + + H ++R +P LH H +AN+ +G+W+T+ + Sbjct: 252 DRVDTSGFLGWMTVHYSARPVGGEVGDPHLHVHGNLANMALAADGKWRTVGAGG------ 305 Query: 186 IENVYANQIAFGRLYREKLKEQV-EALGYETEVVGKHGMWEMPGVPV---EAFSGRSQTI 241 ++ + A + +L++ E G E + G WE+ G+ FS R+ I Sbjct: 306 -RDILRHAHAADAFVKARLRQVTGERFGMRWERHAETGAWEVVGIDEGLRRHFSRRNAQI 364 Query: 242 -REAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAA----- 295 A + + + + +A + A W +E D+ A A Sbjct: 365 VAAAADDATTGEQKLIARQLAEGKDTTITRADVRAAWRARAEEVVDDVDAMIRRAIPGPE 424 Query: 296 -DQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVI 354 + GP ++ + + GL+E + T DVLA + P + Sbjct: 425 GPDGPSVAGPGGGPVMPFPEEIAAFIWRREGGLTESRKSVTRADVLAHVIDACPFGVPDL 484 Query: 355 ERARAGIDEAIS-REQLIPLDREK-------GLFTSGIHVLDELSVRALSRDIMKQNRVT 406 A A D ++ + + L +T + E ++ + + + Sbjct: 485 AAAEALTDAVLAVDGEAVALPSGGMTHLTNPQRYTHASILAAEQTIAGSVAERLNEGAAQ 544 Query: 407 V------------------HPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRER 448 + P + + A + ++ G+ G G+ Sbjct: 545 LTTEAAELAITTFETARTTDPLRPFVMSDEQRAATLRFLTAGHGVDVLRGKAG-TGKTTI 603 Query: 449 VAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQ--LLEGMAFTPGSTVI 506 ++ M G V A + ++ + ++ + G ++ Sbjct: 604 MSAARMGWEAAGLRVAGAATAAVAASKLQAESGITSATVATWLMDIRDGGRRMADTDVLV 663 Query: 507 VDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMKDAGVNTYRWQGGEQR 566 +++ + ++ LL AA H V+V+ + G Sbjct: 664 LEEAAMVDDRDVADLLTAAAEHGVKVVQIGDWAQLKAIGVG-----GGFKRAHEIVDGLE 718 Query: 567 PATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGL 626 + + D R A A + G + S L G + Sbjct: 719 LSENRRQKDAVERAALEA-----WLDGGRRTAL----------------SMLAEHGRVHA 757 Query: 627 PEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDA 686 A + + + R +E D V+ A L L Sbjct: 758 VRTPDEAYAAMLGAWKDTVDRLEGDVHDQIE---------DLVVLAARNADVEVLNLGAR 808 Query: 687 QGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLR------VSGGDRLQVASV 740 + + ++ +++L E++ +A G+ +R+ R V G R QV Sbjct: 809 ELRKKAGELT-GGHTFALAGGERLELAAGDVIRIKRNDYRTRRGGDVDVLNGYRGQVTYA 867 Query: 741 SEDAMTVVV-----PGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQM 795 S+ + V G ++ L++G+ T + + Sbjct: 868 SKGGVAVEWRRPADDGGYAIERAWITADQIADGALQHGYAMTIAAAQGLTCDYTLVYGVG 927 Query: 796 AMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGET------SL 849 A N+ L+R L+ D + E R E + Sbjct: 928 ADANSLYPALSRDRIATHLWLPADVVESDETRRRLGEAQSDQELLDRAVAAYADSLERDN 987 Query: 850 ETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEIN 909 + + + A A A+ + V + + + + + Sbjct: 988 DDRMVSDELAAAPEAHPAVPIPHQVQPEHERVVDETEQHPVPEPADVTEQHSAAVREDAG 1047 Query: 910 AQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKL 969 G + + A+ A +E E S + + L ER+ G+ +L Sbjct: 1048 DDGTEGARAHPEAAQEAAQA----AAEHEVEPSAEDRAAARQAQLGVLRERLQGDGAPEL 1103 Query: 970 TSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRA 1029 T Q+A +L G T++ VG T R Sbjct: 1104 TGEQKARLEKLLA-------------AGFTSRAEQQPEPEFEAWRDRPYGHVG---TQRL 1147 Query: 1030 VGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAA 1089 + A+ D Q + + ++A Sbjct: 1148 TSLIAERTAQARRAERLAADLARQAEAKREALAAPVT-----PGQERAREVAEVLDRADQ 1202 Query: 1090 GGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVE 1149 AV R+ + R+ + +E++RQ E + + Sbjct: 1203 LAQNAV---------------AERVAEQRAREALRHAQEVLRQLEEAKTKSRLALRLAGT 1247 Query: 1150 RALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLY 1209 L + + A + + Sbjct: 1248 SRKETLALAAEYDQRETAAYREILRANRAAETAHREAWATIRSPETVGWFEQQGSRREAP 1307 Query: 1210 EAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANI 1269 + T I N + +AGE KE + Sbjct: 1308 STVEELQTRLAEMRERLPDIERITNNGV---ARAAANAERQAGEHQKEATRLTAAAAKLQ 1364 Query: 1270 RDGELR 1275 + LR Sbjct: 1365 EEKALR 1370 Score = 189 bits (479), Expect = 1e-45, Method: Composition-based stats. Identities = 149/934 (15%), Positives = 254/934 (27%), Gaps = 184/934 (19%) Query: 868 IHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIK--RGDLLYVDVAKG 925 I + + + + D+L G + + G+ + + Sbjct: 450 IWRREGGLTESRKSVTRADVLAHVIDACPFGVPDLAAAEALTDAVLAVDGEAVALPSGGM 509 Query: 926 YG---TGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEK-------------- 968 + AE++I + E + EL Sbjct: 510 THLTNPQRYTHASILAAEQTIAGSVAERLNEGAAQLTTEAAELAITTFETARTTDPLRPF 569 Query: 969 -LTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTH 1027 ++ QRAAT L V++G AG GKTT SA M E+ RV G Sbjct: 570 VMSDEQRAATLRFLTAGHGVDVLRGKAGTGKTTIM----SAARMGWEAAGLRVAGAATAA 625 Query: 1028 RAVGEMR-SAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYAL 1086 A +++ +G+ + T+A++L D R G + +L+E++MV + D+A Sbjct: 626 VAASKLQAESGITSATVATWLMDI----RDGGRRMADTDVLVLEEAAMVDDRDVADLLTA 681 Query: 1087 IAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAV-YSLIN 1145 A G + V GD QL+AI G F+ D + E RQ + A + ++ Sbjct: 682 AAEHGVKVVQIGDWAQLKAIGVGGGFKRA--HEIVDGLELSENRRQKDAVERAALEAWLD 739 Query: 1146 RDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVP 1205 ALS L R Sbjct: 740 GGRRTALSMLAEHGRVHAVRTPDEAYAA-------------------------------M 768 Query: 1206 MTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLN 1265 + ++ V G + E +++ N D VLN ++R+KAGEL Sbjct: 769 LGAWKDTVDRLEGDVHDQIEDLVVLAARNADVEVLNLGARELRKKAGELTGGHTFALAGG 828 Query: 1266 TANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAV 1325 D + + N Y G D ++ E Sbjct: 829 ERLELAA-----------GDVIRIKRNDYRTRRGGDVDVLNGYRGQVTYASKGGVAVEWR 877 Query: 1326 AEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRP 1385 T D++ Sbjct: 878 RPADDGGYAIERAWITADQI---------------------------------------- 897 Query: 1386 GQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQV 1445 A+ + YA+T AQG + + + + A S Y ALSR + Sbjct: 898 ----ADGALQHGYAMTIAAAQGLTCDYTLVY-------GVGADANSLYPALSRDR----- 941 Query: 1446 YTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAG 1505 A ++ P E R A+ +++ Sbjct: 942 -------------------IATHLWLPADVVESDETRRRLGEAQSDQELLDRAVAAYADS 982 Query: 1506 LAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGEGRVKG 1565 L + P+ + A+P + ++ + + Sbjct: 983 LERDNDDRMVSDELAAAPEAHPAVPIPHQVQPEHERVVDETEQHPVPEPADVTEQHSAAV 1042 Query: 1566 SGDAQFVALQGSRN-----------GESLLADNMQDGVRIARDNPDSGVVVRIAGEGRPW 1614 DA +G+R + + AR + R+ G+G P Sbjct: 1043 REDAGDDGTEGARAHPEAAQEAAQAAAEHEVEPSAEDRAAARQAQLGVLRERLQGDGAPE 1102 Query: 1615 NPGA------------ITGGRVWGDIPDNSVQPGAGNGEPVTAEVLAQRQAEEAIRRETE 1662 G T P+ G T + + A R E Sbjct: 1103 LTGEQKARLEKLLAAGFTSRAEQQPEPEFEAWRDRPYGHVGTQRLTSLIAERTAQARRAE 1162 Query: 1663 RRADEIVRKMAENKPDLPDGKTE--QAVREIAGQERDRAAITEREAALPEGVLREPQRVR 1720 R A ++ R+ + L T + RE+A + DRA + A Sbjct: 1163 RLAADLARQAEAKREALAAPVTPGQERAREVA-EVLDRADQLAQNAVAERVAE------- 1214 Query: 1721 EAVREIARENLLQERLQQMERDMVRDLQKEKTLG 1754 R QE L+Q+E + + G Sbjct: 1215 --QRAREALRHAQEVLRQLEEAKTKSRLALRLAG 1246 >UniRef50_Q1WTZ7 Exodeoxyribonuclease V alpha chain n=2 Tax=Lactobacillus salivarius RepID=Q1WTZ7_LACS1 Length = 824 Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 111/862 (12%), Positives = 240/862 (27%), Gaps = 187/862 (21%) Query: 649 MYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPE 708 Y+ V+ + R + A + +L +G + ++ E Sbjct: 32 FYKVLQVLIKETNFDWDDQRITVTGSFANIQTDSLYRFEGNVVEHQRYGKQFQAESYQLE 91 Query: 709 KMPVADGERLRVTGKIPGLRV-SGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTA 767 DG + + + V + DA+ V+ + L +S+ + Sbjct: 92 LPSTKDG-VIAYLSSDEFVGIGKKTAEKIVKKLGVDAIDVLNNDMDKLEELGLSEKQKDS 150 Query: 768 ----LKLENGW------VETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSS 817 LK G + + G + + + ++ + T ++ + R D+ S Sbjct: 151 IKKVLKENYGIDKIIIELNSLGFTSTMAGRIYNNYTNSTLEIIHEDPY-RLSVDIDGISF 209 Query: 818 LDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPV-VE 876 + A++ + R +++ + + L + Sbjct: 210 TKADQIAQQFGF-----ASDSPGRIRGAIFQSLYDLTYATGNTYVELNPLVTETLKLLES 264 Query: 877 SKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRAS 936 ++ A + + + + SR Sbjct: 265 NRNEAIDPQLVADQLIKL------------------------TEEDKIKSDDNKVYSRTF 300 Query: 937 YEAEKSILRHILEGKEAVMPLME-----------RVPGELMEKLTSGQRAATRMILETSD 985 + AE +I ++ ++ + + +L S Q+ A + +++ Sbjct: 301 FNAEWNIAENLYRLLKSGNSDLPNNDALLDKLLIKAEDQLGIDYDSEQKRAIKDAIKSPV 360 Query: 986 RFT----------VVQGYAGVGKTTQFRAVMSAVNMLP-------ESERPRVVGLGPTHR 1028 ++ G AV + +N + + ++ PT R Sbjct: 361 FLLTGGPGTGKTTIING---------IVAVYALLNDIDLDIGKYDKDNPFPILLAAPTGR 411 Query: 1029 AVGEMRS-AGVDAQTLASFLHDTQLQQR-SGETPDFSNTLFLLDESSMVGNTDMARAYAL 1086 A M G+ A T+ L + + + L ++DE+SMV M Sbjct: 412 AAKRMAESTGLPASTIHRMLGINAHDDKLPEDIQELEGALLIVDETSMVDTLIMDLLLNS 471 Query: 1087 IAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINR 1146 I + + + GD +QL ++ PGQ F A + +I RQ Sbjct: 472 IPSH-MQVIFVGDRNQLPSVQPGQVFSDLLVSDALPKKELTKIYRQ-------------G 517 Query: 1147 DVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPM 1206 + ++ S+K ++P + + Q E KA L D Sbjct: 518 EGSSIINLAHSIKNGELPADFTKAQSDRAFIPCEAGQLTSAVEQVVKAALNKGNSKDD-- 575 Query: 1207 TLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNT 1266 + + Y G N LN+++ ++ A KE + + Sbjct: 576 --IQVLAPMYRG---------------NVGINRLNTILQELLNPANPRQKEVIFNEQVFR 618 Query: 1267 ANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVA 1326 R L + + + +I GI+ Sbjct: 619 IGDRVLHL-------VNDPENNVFNGDIGKIVGINIPK---------------------- 649 Query: 1327 EGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPG 1386 TK D++ + G+ VT Sbjct: 650 ---------------------TKKDKKG------EQIIADFDGNEVTFDKKDWI------ 676 Query: 1387 QEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVY 1446 ++ LAY ++ H +QG+ I + + M Y ++R KQ + + Sbjct: 677 ------NLTLAYCMSIHKSQGSEFP--IVVLAMLPQYQRMFARNLLYTGITRAKQKLVLL 728 Query: 1447 TDNRQGWTDAIN-NAVQKGTAH 1467 N + + ++ + T Sbjct: 729 -GNVSSFRQSAEIISLNRKTGL 749 Score = 161 bits (406), Expect = 3e-37, Method: Composition-based stats. Identities = 72/646 (11%), Positives = 167/646 (25%), Gaps = 109/646 (16%) Query: 290 AYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSE--RKVQFTYTDVLARTVGIL 347 + +AD G AS ++ A+ Q++ L+ ++ T+ +L Sbjct: 203 DIDGISFTKADQIAQQFGFASDSPGRIRGAIFQSLYDLTYATGNTYVELNPLVTETLKLL 262 Query: 348 PPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQN---- 403 + D+ I + + + S E ++ ++K Sbjct: 263 ESNRNEAIDPQLVADQLIKLTEEDKIKSDDNKVYSRTFFNAEWNIAENLYRLLKSGNSDL 322 Query: 404 ----------RVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELV 453 + + + + A+ + + G G+ + +V Sbjct: 323 PNNDALLDKLLIKAEDQLGIDYDSEQKRAIKDAIKSP---VFLLTGGPGTGKTTIINGIV 379 Query: 454 MMA--------------REQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAF 499 + ++ + + A R+ M + L I + Sbjct: 380 AVYALLNDIDLDIGKYDKDNPFPILLAAPTGRAAKRMAESTGLPASTIHRMLGINAHDDK 439 Query: 500 TPGST-------VIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTG--TGSALMAM 550 P +IVD+ + LL+ H + + D Q G + Sbjct: 440 LPEDIQELEGALLIVDETSMVDTLIMDLLLNSIPSHMQVIFVGDRNQLPSVQPGQVFSDL 499 Query: 551 KDAGVNTYRWQGGEQRPATIISEPD--RNVRYARLAGDFAASVKAGEESVAQVSGVREQA 608 + + R S + +++ L DF + E Sbjct: 500 LVSDALPKKELTKIYRQGEGSSIINLAHSIKNGELPADFTKAQSDR------AFIPCEAG 553 Query: 609 ILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDR 668 LT A+ +K G + + L+P++ Sbjct: 554 QLTSAVEQVVKAALNKGNSKDDIQVLAPMY---------------------------RGN 586 Query: 669 YVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLR 728 I+R+ L ++ +F + G+R+ P Sbjct: 587 VGINRLNTILQELL-----------NPANPRQKEVIFNEQ--VFRIGDRVLHLVNDPENN 633 Query: 729 VSGGDRLQVASVS-----EDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVS 783 V GD ++ ++ +D + + + + L L Sbjct: 634 VFNGDIGKIVGINIPKTKKDKKGEQIIADFDGNEVTFDKKDWINLTLAYCMSIHKSQGSE 693 Query: 784 DSATV---FASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQI 840 V +M N G+ R+ + + L ++ R + ++ T + ++I Sbjct: 694 FPIVVLAMLPQYQRMFARNLLYTGITRAKQKLVLLGNVSSFRQSAEIISLNRKTGLLKRI 753 Query: 841 KTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVD 886 + G +A+ + + D Sbjct: 754 RMEFGVEGKP-----------VEKTDNEEVAVNNNKEQDSIVEEQD 788 >UniRef50_C6AF24 Conjugal transfer protein TraA n=2 Tax=Bartonella grahamii as4aup RepID=C6AF24_BARGA Length = 1236 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 93/617 (15%), Positives = 197/617 (31%), Gaps = 117/617 (18%) Query: 851 TAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINA 910 A K ++ + L ++ +K F+ DL + F ++ + Sbjct: 263 QANEKIKQRSVEKIKENPNEVLKLISFEKSTFNRGDLAKIINRYVDNANDFNDI---MVR 319 Query: 911 QIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVM------------PLM 958 + +L+ + + ++ + E + R ++ + + Sbjct: 320 LEQSNNLIKIKDHSNPHKVIYSTKEILKTEYDMERSVVSLSQTTGHGVKDRQVLEAIKSV 379 Query: 959 ERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERP 1018 E K + Q+ A + I V GYAG GK+T ++ A N+ + Sbjct: 380 ENKDKSNRFKFSEEQKLAVQHI-TDDKGIAAVVGYAGAGKST----LLEAANIAWVNSGK 434 Query: 1019 RVVGLGPTHRAVGEMRSAG-VDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGN 1077 RV G +A + + + ++TLA++ +L ++ + +F++DE+ MV + Sbjct: 435 RVFGAALAGKAAEGLEESSKIKSKTLAAW----ELAWKNKKDELRVGDVFVIDEAGMVSS 490 Query: 1078 TDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPEL- 1136 ++ + G + V GD QLQ I G FR + I RQ E Sbjct: 491 KQLSHFVQKVEKAGAKIVLVGDNMQLQPIEAGAAFRAVVDN--IGYVELSGIRRQKEEWG 548 Query: 1137 REAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAML 1196 ++A V+ AL ++ + + A V ++ +++ + +++ Sbjct: 549 QDASRQFARGQVKEALDHYKNRGFVRETKTRDQ-AINTLVKDWMNTRRKVEQKCEEEGKT 607 Query: 1197 KGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGK 1256 ++ L++ H N + LN I + A L Sbjct: 608 L-------------------------RGDELLVLAHTNASVKKLNEEIRTALKDARLLKS 642 Query: 1257 EQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNT 1316 E +A++ + + R D ++ ++N Sbjct: 643 ED-------SASVTNFDTLRGHREFVVGDRIIFLENAQFE-------------------- 675 Query: 1317 RLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVT--L 1374 R+ ++ + TV + + L Sbjct: 676 ----------------------------ERYATELGKQKVKNGMLGTVLSTQNERGKPLL 707 Query: 1375 SDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYV 1434 + + Q Q++D YA T H +QG + L + ++ +YV Sbjct: 708 KVRLDSGQEVVFSNQTYQNVDHGYAATVHKSQGVTVDNVFVLASSSMDQH------LSYV 761 Query: 1435 ALSRMKQHVQVYTDNRQ 1451 A+SR + +Y Sbjct: 762 AMSRHRHQSHLYVAEED 778 Score = 202 bits (514), Expect = 9e-50, Method: Composition-based stats. Identities = 69/643 (10%), Positives = 178/643 (27%), Gaps = 82/643 (12%) Query: 242 REAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQR--- 298 +G +LK + D + KE G I Sbjct: 194 ENVIGHKDALKDLRNSWGDIATRHLTFAGYDIKVDMRSY-KERGLSIEPTIHLGQSAHAM 252 Query: 299 ------ADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENG 352 ++ + +++ + + +S K F D+ A+ + Sbjct: 253 SKKGLASNAVQANEKIKQRSVEKIKENPNEVLKLISFEKSTFNRGDL-AKIINRYVDNAN 311 Query: 353 VIERARAGIDEAISREQLIPLDRE----KGLFTSGIHVLDELSVRALSRDIMKQNRVTV- 407 +++ LI + K ++++ + E + + + V Sbjct: 312 DFNDIMVRLEQ---SNNLIKIKDHSNPHKVIYSTKEILKTEYDMERSVVSLSQTTGHGVK 368 Query: 408 --------------HPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELV 453 + AV + D +A V G G AG+ + Sbjct: 369 DRQVLEAIKSVENKDKSNRFKFSEEQKLAVQHI-TDDKGIAAVVGYAG-AGKSTLLEAAN 426 Query: 454 MMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRR--QLLEGMAFTPGSTVIVDQGE 511 + G+ V A ++ +++ ++ + + + G ++D+ Sbjct: 427 IAWVNSGKRVFGAALAGKAAEGLEESSKIKSKTLAAWELAWKNKKDELRVGDVFVIDEAG 486 Query: 512 KLSLKETLTLLDGAARHNVQVLITDSG---QRTGTGSALMAMKDAGVNTYRWQGGEQRPA 568 +S K+ + + ++++ Q G+A A+ D Y G +R Sbjct: 487 MVSSKQLSHFVQKVEKAGAKIVLVGDNMQLQPIEAGAAFRAVVDN--IGYVELSGIRRQK 544 Query: 569 TIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPE 628 G+++ Q + + + L + + Sbjct: 545 EEW----------------------GQDASRQFARGQVKEALDHYKNRGFVRETK--TRD 580 Query: 629 VTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQG 688 + L W+++R + + G + +H + ++ + + Sbjct: 581 QAINTLVKDWMNTRRKVEQKCEEEGKTLRGDELLVLAHTNASVKKLNEEIRT---ALKDA 637 Query: 689 ETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIP----------GLRVSGGDRLQVA 738 S+ +++ G+R+ +V G V Sbjct: 638 RLLKSEDSASVTNFD-TLRGHREFVVGDRIIFLENAQFEERYATELGKQKVKNGMLGTVL 696 Query: 739 SVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSAT-VFASVTQMAM 797 S + ++ R + V S T +++G+ T S + VF + Sbjct: 697 STQNERGKPLLKVRLDSGQ-EVVFSNQTYQNVDHGYAATVHKSQGVTVDNVFVLASSSMD 755 Query: 798 DNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQI 840 + + ++R LY + ++ + ++ ++ Sbjct: 756 QHLSYVAMSRHRHQSHLYVAEEDFKNVRLHEHKQVKGTITGEL 798 >UniRef50_Q0BRZ0 TraI protein (DNA helicase I) n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BRZ0_GRABC Length = 571 Score = 254 bits (648), Expect = 3e-65, Method: Composition-based stats. Identities = 140/502 (27%), Positives = 206/502 (41%), Gaps = 54/502 (10%) Query: 1 MM--SIAQVRSAGSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEG 58 MM +I+ + SAG A +YY D Y G W G+GA+ L L G+VD + F RLLEG Sbjct: 1 MMVATISALTSAGQAASYYEADDYYAEGGLAPSEWLGQGAQVLDLAGAVDHEQFARLLEG 60 Query: 59 RLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAVRQVE 118 + G L M++G HRPG+D+TFSAPKSVS+MA + GD+RLI H +AV A+ E Sbjct: 61 HV-AGQSLGTMREGEWEHRPGWDVTFSAPKSVSIMAEVAGDRRLIAVHERAVKTALGLAE 119 Query: 119 AL-ASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH-NGEWKTLS 176 +TR+ DG TGNLV+A F H TSR +PQLHTH V+ N+T+ G+W++L Sbjct: 120 QHFTATRLREDGSIRREATGNLVIASFRHGTSRALDPQLHTHNVILNMTRDKAGQWRSL- 178 Query: 177 SDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGV---PVEA 233 Y Q G +YR++L +V+ LGY E GK +E+ G+ +EA Sbjct: 179 --------EPRAFYQMQKLMGAVYRQELAAEVQRLGYAIE-RGKDSTFEIAGIGTETLEA 229 Query: 234 FSGRSQTIREAVGED------ASLKSRDVAAL----------DTRKS--------KQHVD 269 FS RS I + E AS + VAAL DTR++ +D Sbjct: 230 FSQRSAAIEARLAERGKSRDQASAAEKQVAALDAGGGRVIECDTREARFAQIAQDYASLD 289 Query: 270 PEIKMAEWMQTLKETGFDI---RAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAG 326 + + + G D+ A+ A + A + Sbjct: 290 TKERRKALVIEPSREGRDVLTKEIRHRLAENGALHGPTVETARLVPRDLTRAEAKDAHSY 349 Query: 327 LSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLD------REKGLF 380 ++F I+ +A + A I F Sbjct: 350 AIGDTIRFAKDYADKGVSKAQAYRVVGIDTKKAALTLADQHGGAIDWRLRQWGASHSQAF 409 Query: 381 TSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQG 440 TS + L +R+ R+ + + +A LA+ + + Sbjct: 410 TSEVIELRAGDQVQFTRNDRVLGRINGQQGEVIAVDPATREAKVQLARGKIETLALDNP- 468 Query: 441 GAAGQRERVAELVMMAREQGRE 462 Q + + QGR Sbjct: 469 --RDQHIAHSYVATAFAAQGRT 488 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 82/384 (21%), Positives = 130/384 (33%), Gaps = 20/384 (5%) Query: 1126 MKEIVRQ--TPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQ 1183 M + RQ E++ Y++ + + Q A Sbjct: 190 MGAVYRQELAAEVQRLGYAIERGKDSTFEIAGIGTETLEAFSQRSAAIEARLAERGKSRD 249 Query: 1184 EAKLAEAQQKAMLKGEAFP---DVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVL 1240 +A AE Q A+ G D + I +DY + R + L++ E R VL Sbjct: 250 QASAAEKQVAALDAGGGRVIECDTREARFAQIAQDYASLDTKERRKALVIEPSREGRDVL 309 Query: 1241 NSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLV--------DN 1292 I + G L V L ++ E + ++ Sbjct: 310 TKEIRHRLAENGALHGPTVETARLVPRDLTRAEAKDAHSYAIGDTIRFAKDYADKGVSKA 369 Query: 1293 VYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDR 1352 +R+ GI +TL D G R+ A +T + I + GD+++FT++DR Sbjct: 370 QAYRVVGIDTKKAALTLADQHGGAIDWRLRQWGASHSQAFTSEVIELRAGDQVQFTRNDR 429 Query: 1353 ERGYVANSVWTVTAVSG--DSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASE 1410 G + V AV + + E +QHI +Y TA AQG + Sbjct: 430 VLGRINGQQGEVIAVDPATREAKVQLARGKIETLALDNPRDQHIAHSYVATAFAAQGRTA 489 Query: 1411 TFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDA-INNAVQKGTAH-- 1467 + + +S YVALSR K VYT++R A + A K TA Sbjct: 490 ERTFI--HADSAATNLLDQKSFYVALSRAKDTTAVYTNDRGKLVGALLERAGLKQTALAP 547 Query: 1468 DVFEPKPDREVMNAERLFSTAREL 1491 + P R N + + S L Sbjct: 548 QLTGGMPSRAEQNRKAVASHGVAL 571 Score = 110 bits (274), Expect = 6e-22, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 88/280 (31%), Gaps = 10/280 (3%) Query: 570 IISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVRE-QAILTQAIRSELKTQGVLGLPE 628 +I R R+A++A D+A+ + RE + +LT+ IR L G L P Sbjct: 268 VIECDTREARFAQIAQDYASLDTKERRKALVIEPSREGRDVLTKEIRHRLAENGALHGPT 327 Query: 629 VTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSH----DRYVIDRVTAQSHSLTLR 684 V L P L Y G + Y + + + +LTL Sbjct: 328 VETARLVPRDLTRAEAKDAHSYAIGDTIRFAKDYADKGVSKAQAYRVVGIDTKKAALTLA 387 Query: 685 DAQGETQVVRISSLDSSW-SLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSED 743 D G R+ +S F E + + G++++ T L G + +V +V Sbjct: 388 DQHGGAIDWRLRQWGASHSQAFTSEVIELRAGDQVQFTRNDRVLGRINGQQGEVIAVDPA 447 Query: 744 AMTV-VVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAM---DN 799 V R + TL + + + + T + + Sbjct: 448 TREAKVQLARGKIETLALDNPRDQHIAHSYVATAFAAQGRTAERTFIHADSAATNLLDQK 507 Query: 800 ATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQ 839 + L+R+ +Y++ L R Sbjct: 508 SFYVALSRAKDTTAVYTNDRGKLVGALLERAGLKQTALAP 547 >UniRef50_B9M4M2 Exodeoxyribonuclease V, alpha subunit n=8 Tax=Desulfuromonadales RepID=B9M4M2_GEOSF Length = 609 Score = 254 bits (647), Expect = 3e-65, Method: Composition-based stats. Identities = 89/662 (13%), Positives = 188/662 (28%), Gaps = 102/662 (15%) Query: 837 SEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSF-A 895 +E + + + S+ A LA V + + + D+ A + Sbjct: 11 AEIMPFSDMDRHFAAFMCRLASSDDKELWLAAALASQAVSNGNVCLDLTDVCQSAAGYEI 70 Query: 896 AEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVM 955 + ++ E+ GD + + L + E + R +L + Sbjct: 71 DDPAAWSARLRELPVVGAPGDFTPLVL---DSANRLYLHRYWSYESDLARALLRLADNKP 127 Query: 956 PLMERVPGELMEKLTSG---------QRAATRMILETSDRFTVVQGYAGVGKTTQFRAVM 1006 + E M +L Q AA + S + TV+ G G GKT+ V+ Sbjct: 128 VFDRELLREGMSRLFPEGNAGETDWQQLAALACV---SRQITVIAGGPGTGKTSTVFRVL 184 Query: 1007 SAVNMLPESERPRVVGLGPTHRAVGEMRSAGVDAQ------------------TLASFLH 1048 + + + + PT +A G + + + A+ T+ L Sbjct: 185 ILLIEQATAGKCHIALAAPTGKAAGRLGESIISARSGMPVSEHVLQQIPNQVTTIHRLLG 244 Query: 1049 DTQL--QQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAI 1106 + R + ++DE+SMV MA+ R + GD DQL ++ Sbjct: 245 HVPGSSRFRYNRDNPLPFDVVVVDEASMVSLPLMAKLVD-ALRDTTRLILLGDRDQLASV 303 Query: 1107 APGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQ 1166 G + + L +A L + + + Sbjct: 304 EAGAVLGDICNTGS------------SQRLSKAFRDLAEEVIGPGAAIEYADDADVHHLN 351 Query: 1167 EGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQ 1226 + S + S +L + + + R+ TG E ++ Sbjct: 352 DSIIVLRKSYRFGADSGIGELGRLVNEGNGAAALELLSGQKYADLLFRENTGM--EKLQE 409 Query: 1227 TLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDA 1286 L VT + R L + + L +++ + + R ++ + Sbjct: 410 ALAVTITDGFRPYLMAKTAESAFA--SLADFRILCALRQGPFGTEAVNRLVAKILAEKGL 467 Query: 1287 LVLVDNVY-HRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRM 1345 + Y + ++++D + L + + L P Sbjct: 468 IRPHGRWYAGQPVMVTRNDYNLRLFNGDIGIILPDP------------------------ 503 Query: 1346 RFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGA 1405 + + + +R + A+A+T H + Sbjct: 504 ---------------------AADNELRAFFTTTDGSLRSILPLRLPEHETAFAMTVHKS 542 Query: 1406 QGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGT 1465 QG+ + + L + E Y AL+R K V+ + + + + Sbjct: 543 QGSEFSRILLLLPD--RHSEVLTRELIYTALTRAKTGVE-VCGPGDVFVKSSARRTLRKS 599 Query: 1466 AH 1467 Sbjct: 600 GL 601 Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats. Identities = 68/556 (12%), Positives = 138/556 (24%), Gaps = 66/556 (11%) Query: 319 AVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPL--DRE 376 A A +S V TDV G + + + PL D Sbjct: 41 AAALASQAVSNGNVCLDLTDVCQSAAGYEIDDPAAWSARLRELPVVGAPGDFTPLVLDSA 100 Query: 377 KGLFT----------SGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVL 426 L+ + + + R+++++ + PE + T A L Sbjct: 101 NRLYLHRYWSYESDLARALLRLADNKPVFDRELLREGMSRLFPEGNAGETDWQQLAA--L 158 Query: 427 AQDRPSLAIVSGQGGAAGQRERVAELVMMAREQ--GR-EVQIIAADRRSQMNMKQD---- 479 A + +++G G L+++ + G+ + + A ++ + + Sbjct: 159 ACVSRQITVIAGGPGTGKTSTVFRVLILLIEQATAGKCHIALAAPTGKAAGRLGESIISA 218 Query: 480 -ERLSG------------ELITGRRQ--------LLEGMAFTPGSTVIVDQGEKLSLKET 518 + I P V+VD+ +SL Sbjct: 219 RSGMPVSEHVLQQIPNQVTTIHRLLGHVPGSSRFRYNRDNPLPFDVVVVDEASMVSLPLM 278 Query: 519 LTLLDGAARHNVQVLITDSGQR--TGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDR 576 L+D +L+ D Q G+ L + + G QR + + Sbjct: 279 AKLVDALRDTTRLILLGDRDQLASVEAGAVLGDICNTG--------SSQRLSKAFRDLAE 330 Query: 577 NVRYARLAGDFAASVKAGE-ESVAQVSGVREQAILTQAIRS--ELKTQG------VLGLP 627 V A ++A V + I L +G L Sbjct: 331 EVIGPGAAIEYADDADVHHLNDSIIVLRKSYRFGADSGIGELGRLVNEGNGAAALELLSG 390 Query: 628 EVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQ 687 + L + + + +L Sbjct: 391 QKYADLLFRENTGMEKLQEALAVTITDGFRPYLMAKTAESAFASLADFRILCALRQGPFG 450 Query: 688 GETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVA-SVSEDAMT 746 E ++ + + L RP G+ + VT LR+ GD + + D Sbjct: 451 TEAVNRLVAKILAEKGLIRPHGR-WYAGQPVMVTRNDYNLRLFNGDIGIILPDPAADNEL 509 Query: 747 VVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFAS---VTQMAMDNATLN 803 + + + + S + +++ Sbjct: 510 RAFFTTTDGSLRSILPLRLPEHETAFAMTVHKSQGSEFSRILLLLPDRHSEVLTRELIYT 569 Query: 804 GLARSGRDVRLYSSLD 819 L R+ V + D Sbjct: 570 ALTRAKTGVEVCGPGD 585 >UniRef50_B3E889 Exodeoxyribonuclease V n=2 Tax=Bacteria RepID=B3E889_GEOLS Length = 1214 Score = 253 bits (644), Expect = 7e-65, Method: Composition-based stats. Identities = 105/705 (14%), Positives = 209/705 (29%), Gaps = 70/705 (9%) Query: 874 VVESKKLAFSMVDLLTEAKSFAAEGTGFTELG--GEINAQIKRGDLLYVDVAKGYGTGLL 931 E+K + +L + + + + + + + Sbjct: 463 KFETKHTFLTCGQMLQDVNRRLSYLPDWKRVEFTARYLEVDRTNLEFAMVFRREGERDYA 522 Query: 932 VSRASYEAEKSILRHILEGKEAVM-----PLMERVPGELMEK----LTSGQR-------- 974 R +YEAE+ I I + P+ ER +L+ + L R Sbjct: 523 YLRGAYEAEREIEDRIRKLAGYSDITFRSPVTERHWKDLLFEAKSPLAEKSRHDYEVAIE 582 Query: 975 -AATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM 1033 A + +VV G AG GKTT R+++ A+ + L PT +A + Sbjct: 583 AQAAVCAKIFNRPISVVCGAAGTGKTTIIRSIIQAIEK-AHGTDATFLLLAPTGKAADRI 641 Query: 1034 RS-AGVDAQTLASFLHDTQLQ------QRSGETPDFSNTLFLLDESSMVGNTDMARAYAL 1086 R G +A T+ SFL + SG + T F++DE+SM+ +A + Sbjct: 642 REKTGKEASTIHSFLARRGWLNPNLTLKHSGGQREDQVTTFVIDEASMLDLELLAAVFRA 701 Query: 1087 IA-AGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVA----IMKEIVRQTPELREAVY 1141 I + R + GD +QL I G+ F + + +RQ Sbjct: 702 INWSAVQRIILVGDPNQLPPIGRGKVFADIIEWLRKNHPASIGELTVNLRQMEN-----R 756 Query: 1142 SLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAF 1201 L+ + P++ + E + + + ++ + Sbjct: 757 LTGKGTGILDLASIYVRNPNRDQKDEEESIRAELMLQRLQDLPPDGTVDKDLRVIYWKGA 816 Query: 1202 PDVPMTLYEAIVRDYTGRTPE----AREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKE 1257 D+ + IV D + E L + + H V Sbjct: 817 DDLLSKIVNRIVADMEEDSGEKFNPEAAHALWLAATRGKEKNPRPDYHQVISPYRHEDFG 876 Query: 1258 QVMVPVLNTANIRDGELRRL---STWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEG 1314 + + R +RR+ + + + + + + Sbjct: 877 TEAINLRIQQEARGVGMRRVGLLAGLTLFDKVIQVRNRGASDAIWAYNHQTRQNERSSVF 936 Query: 1315 NTRLISPREAVAEGVTLYTPDTIRVG-TGDRMRFTKSDRERGYVANSVWTVTAVSGDSVT 1373 N L +G P+ ++RF++ + + + Sbjct: 937 NGELGFVVPHALDGSKWQVPEKTYYRIKRFQVRFSRKEHLAFAYGKELGYAMEGTKKR-- 994 Query: 1374 LSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAY 1433 E+ E +++LAYAI+ H +QG+ + + + E Y Sbjct: 995 ----------YLPDEKPEDNLELAYAISVHKSQGSEFERVYFVLP--KQKTALLSPELFY 1042 Query: 1434 VALSRMKQHVQ-VYTDNRQGWTDAINNAVQKG------TAHDVFEPKPDREVMNAERLFS 1486 ++R +H + ++ I+ + + E++ E F Sbjct: 1043 TGITRATRHCTVLIEEDIAPLLK-IHRPESSHLVGINCSLFEFTPAPDGFELIRREGFFE 1101 Query: 1487 TARELRDVAAGRAVLRQAGLAGGDSPARFIAPGRKYPQPYVALPA 1531 R R +A A++R + Y +P A Sbjct: 1102 EGRIHRTLA--EAMVRSKSEVIIANMLFDRDISFLYEKPLYAPDG 1144 Score = 126 bits (316), Expect = 7e-27, Method: Composition-based stats. Identities = 63/731 (8%), Positives = 170/731 (23%), Gaps = 96/731 (13%) Query: 322 QAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFT 381 Q + ++ R + T L + +E A + L +G + Sbjct: 475 QMLQDVNRRLSYLPDWKRVEFTARYLEVDRTNLEFAM--VFRREGERDYAYL---RGAYE 529 Query: 382 SGIHVLDELSVRA--------------LSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLA 427 + + D + A +D++ + + + + +V A Sbjct: 530 AEREIEDRIRKLAGYSDITFRSPVTERHWKDLLFEAKSPLAEKSRHDYEVAIEAQAAVCA 589 Query: 428 QDRPSLAIVSGQGGAAGQRERVAELVMMAREQGRE---VQIIAADRRSQMNMKQDERLSG 484 + V G+ + ++ + ++A ++ +++ Sbjct: 590 KIFNRPISVVCGAAGTGKTTIIRSIIQAIEKAHGTDATFLLLAPTGKAADRIREKTGKEA 649 Query: 485 ELITGRRQLL------------EGMAFTPGSTVIVDQGEKLSLKETLTLLDGAA-RHNVQ 531 I G +T ++D+ L L+ + + Sbjct: 650 STIHSFLARRGWLNPNLTLKHSGGQREDQVTTFVIDEASMLDLELLAAVFRAINWSAVQR 709 Query: 532 VLITDSGQRTGT---GSALMAMKD----------AGVNTYRWQGGEQRPATIISEPD--- 575 +++ + G + + + Q + D Sbjct: 710 IILVGDPNQLPPIGRGKVFADIIEWLRKNHPASIGELTVNLRQMENRLTGKGTGILDLAS 769 Query: 576 --------------RNVRYARLAGDFAASVKAGE-ESVAQVSGVREQAILTQAIRSELKT 620 ++R + G + +V + L I + + Sbjct: 770 IYVRNPNRDQKDEEESIRAELMLQRLQDLPPDGTVDKDLRVIYWKGADDLLSKIVNRIVA 829 Query: 621 QGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPG--MVMEQWNPETRSHDRYVIDRVTAQS 678 E + + +R RP V+ + E + R+ ++ Sbjct: 830 DMEEDSGEKFNPEAAHALWLAATRGKEKNPRPDYHQVISPYRHEDF-GTEAINLRIQQEA 888 Query: 679 HSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVA 738 + +R G + + A + T + V G+ V Sbjct: 889 RGVGMRRV-GLLAGLTLFDKVIQVRNRGASDAIWAYNHQ---TRQNERSSVFNGELGFVV 944 Query: 739 SVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMD 798 + D VP + L + + G+++ + + + + Sbjct: 945 PHALDGSKWQVPEKTYYRIKRFQVRFSRKEHLAFAYGKELGYAMEGTKKRYLPDEKPEDN 1004 Query: 799 NATLNGLARSG---RDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISH 855 ++ + + + L+ +T ++ + + A Sbjct: 1005 LELAYAISVHKSQGSEFERVYFVLPKQKTALLSPELFYTGITRATRHCTVLIEEDIAPLL 1064 Query: 856 QKSALHTPAQQAIHLALPVVE---------SKKLAFSMVDLLTEAKSFAAEGTGFTELGG 906 + + I+ +L ++ F + + Sbjct: 1065 KIHRPESSHLVGINCSLFEFTPAPDGFELIRREGFFEEGRIHRTLAEAMVRSKSEVIIA- 1123 Query: 907 EINAQIKRGDLLYVDVAKGYGTGLLVSRA---SYEAEKSILRHI-----LEGKEAVMPLM 958 N R + G + E+ H+ E K Sbjct: 1124 --NMLFDRDISFLYEKPLYAPDGSFYLPDFTIVWRGEQFYWEHLGLLERDEYKRHWDTKK 1181 Query: 959 ERVPGELMEKL 969 +L Sbjct: 1182 AWYEKHFPGRL 1192 >UniRef50_Q7CW18 Conjugation protein n=8 Tax=Bacteria RepID=Q7CW18_AGRT5 Length = 1266 Score = 252 bits (643), Expect = 9e-65, Method: Composition-based stats. Identities = 157/983 (15%), Positives = 302/983 (30%), Gaps = 149/983 (15%) Query: 804 GLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTP 863 + + + L P+ + + R ++E ++A Sbjct: 189 ANRQLQHEGLDVRIDHRSHIERGLELSPTEHMGVHASQMRQQGMAVERGRLDDEAARQNA 248 Query: 864 A--QQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVD 921 A +Q L ++ +K F D+ + + A + L+ + Sbjct: 249 ALIRQKPEQVLTLISHEKSVFDRHDIAKTLHRYIND--DAQTFQNAFAAVLASSALVELQ 306 Query: 922 VAKGYG------TGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEK------- 968 + +R + E ++ R + +A ++ + + Sbjct: 307 AERIDPGTGKVSNARYSTREMIDLELAMARSAVRLHQAQSHGVDPRHVDRAIERQDRSLR 366 Query: 969 ---------------LTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLP 1013 L+ QR A + I S+R VV G+AG GK+T A Sbjct: 367 RSSGGMLAASDPSAGLSDEQRHAIKHI-TGSERIAVVVGFAGAGKSTMLT----AARKAW 421 Query: 1014 ESERPRVVGLGPTHRAVGEMRSA-GVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDES 1072 E++ +V G + +A + + G++++TLAS+ G S+ LF++DE+ Sbjct: 422 EAQGYQVHGAALSGKAAEGLEESSGIESRTLASW----SYSWDQGRNLIGSSDLFVIDEA 477 Query: 1073 SMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQ 1132 MVG+ +AR G + V GD +QLQAI G PFR + + I RQ Sbjct: 478 GMVGSRQLARFIGEAEERGAKIVLVGDHEQLQAIGAGAPFRAIAEQIGH--VELSGIRRQ 535 Query: 1133 TPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQ 1192 + + SV +H LA + Sbjct: 536 RHDWQRQA----------------------------------SVAFATHKTAEGLAAYRD 561 Query: 1193 KAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLI-VTHLNEDRRVLNSMIHDVREKA 1251 + + IVRDY + + T + + H D R LN+ I + Sbjct: 562 HGDIHF---AESRDAAMAQIVRDYIDDNEKRPDGTRVAMAHRRADVRALNATIRSELQNR 618 Query: 1252 GELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQD 1311 L + + + + D E R G S D +T Q Sbjct: 619 QRLERSLGLSDGPDRGDRGDVEDR-----------------------GNSGDVAELTFQT 655 Query: 1312 AEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDS 1371 + G +GDR+ F +++R+ G + TV V Sbjct: 656 SNGK---------------------RAFASGDRIIFLENNRDLGVKNGMLGTVEDVEKGR 694 Query: 1372 VTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFES 1431 + + + + Q ID YA T H QGA+ A L + +R Sbjct: 695 IVARLDGRGGDSVSIPTDSYQAIDHGYATTIHKNQGATVDRAFVLASSTMDRH------L 748 Query: 1432 AYVALSRMKQHVQVYTDNRQ------GWTDAINNAVQKGTAHDVFEPKPDREVMNAERLF 1485 AYVA++R + VQ+Y D ++ + A + + + + ++ Sbjct: 749 AYVAMTRHRDSVQLYADIKEFTSAGRLVDHGVAPYEHNRRARENYFVTLENDKGERHTVW 808 Query: 1486 STARELRDVAAGRAVLRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNP 1545 A A+ + GL + + G K + + + Sbjct: 809 GVDLNRAMRDASPAIGDKIGLQHVGATPVTLPDGTKAERNAWRVVKGEELAYQKLASRLS 868 Query: 1546 LTTDDGNGLRGFSG-EGRVKGSGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVV 1604 + L S R + D + QG + ++ + +A D V Sbjct: 869 RSGAKETTLDYISEFAERRGIASDPRIAGDQGIADQL-----GLKSEIELASARKDRQEV 923 Query: 1605 VRIAGEGRPWNPGAITGGRVWGDIPDNSVQPGAGNGEPVTAEVLAQRQAEEAIRRETERR 1664 + A + + + + + G P + + ++ R E R Sbjct: 924 LSRAAHLQREQQDRPSERQQVYEERAGDLAGPVRRGHPRSPFARDIDEGQQDDRAEETNR 983 Query: 1665 ADEIVRKMAENKPDLPDGKTEQAVREIAGQERDRAAITEREAALPEGVLREPQRVREAVR 1724 I ++ TE ++ + + + + Q+ R Sbjct: 984 YRRIRWSDLMSQDGAVPPPTETVGQQSSLETGRPTPLVPAITRYQRSIEEVAQQ-----R 1038 Query: 1725 EIARENLLQERLQQMERDMVRDL 1747 ++ + + ++ + R + RD Sbjct: 1039 ALSVIDQQFDTVESLVRRVFRDP 1061 Score = 189 bits (478), Expect = 1e-45, Method: Composition-based stats. Identities = 80/635 (12%), Positives = 181/635 (28%), Gaps = 62/635 (9%) Query: 281 LKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVL 340 + G R R L A Q+ ++Q Q + +S K F D+ Sbjct: 217 TEHMGVHASQMRQQGMAVERGR-LDDEAARQNAALIRQKPEQVLTLISHEKSVFDRHDIA 275 Query: 341 ARTVGILPPENGVIERARAGIDEAISREQLIPLDREKG-------LFTSGIHVLDELSVR 393 + + + A A + + + +L + G +++ + EL++ Sbjct: 276 KTLHRYINDDAQTFQNAFAAVLASSALVELQAERIDPGTGKVSNARYSTREMIDLELAMA 335 Query: 394 ALSRDIMKQNRVTVHP-------------------------EKSVPRTAGYSDAVSVLAQ 428 + + + V P + S + A+ + Sbjct: 336 RSAVRLHQAQSHGVDPRHVDRAIERQDRSLRRSSGGMLAASDPSAGLSDEQRHAIKHITG 395 Query: 429 DRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELIT 488 +A+V G G AG+ + QG +V A ++ +++ + + Sbjct: 396 S-ERIAVVVGFAG-AGKSTMLTAARKAWEAQGYQVHGAALSGKAAEGLEESSGIESRTLA 453 Query: 489 GRRQLLEGMA--FTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSG---QRTGT 543 + ++D+ + ++ + A ++++ Q G Sbjct: 454 SWSYSWDQGRNLIGSSDLFVIDEAGMVGSRQLARFIGEAEERGAKIVLVGDHEQLQAIGA 513 Query: 544 GSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSG 603 G+ A+ + + G ++ + + A AA G+ Sbjct: 514 GAPFRAIAE-QIGHVELSGIRRQRHDWQRQASVAFATHKTAEGLAAYRDHGD----IHFA 568 Query: 604 VREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPET 663 A + Q +R + A + + + +R + +E+ + Sbjct: 569 ESRDAAMAQIVRDYIDDNEKRPDGTRVAMAHRRADVRALNATIRSELQNRQRLERSLGLS 628 Query: 664 RSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGK 723 DR V + +S + K A G+R+ Sbjct: 629 DGPDRGDRGDVEDRGNS---------------GDVAELTFQTSNGKRAFASGDRIIFLEN 673 Query: 724 IPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVS 783 L V G V V + + + GR ++ + + A+ + Sbjct: 674 NRDLGVKNGMLGTVEDVEKGRIVARLDGRG-GDSVSIPTDSYQAIDHGYATTIHKNQGAT 732 Query: 784 DSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTR 843 F + + + R V+LY+ + E +A +L H + Sbjct: 733 VD-RAFVLASSTMDRHLAYVAMTRHRDSVQLYADIKEFTSAGRLVDHGVAPYEHNRRARE 791 Query: 844 AGETSLETAISHQKSALHTPAQQAIHLALPVVESK 878 +LE + + +A+ A P + K Sbjct: 792 NYFVTLENDKGERHTVWGVDLNRAMRDASPAIGDK 826 >UniRef50_A8ZX10 Exodeoxyribonuclease V, alpha subunit n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZX10_DESOH Length = 609 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 90/628 (14%), Positives = 178/628 (28%), Gaps = 103/628 (16%) Query: 872 LPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKG----YG 927 L + F + + +G + + + + G Sbjct: 44 LWHTRRGHVCFDLNR-ADAFLTDGLDGVSLPDGRQWADILSRSAVVARPGGDPAPLVLDG 102 Query: 928 TGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQ---------RAATR 978 G L + ++ + I + + E + + GQ R A Sbjct: 103 EGRLYLHRYWAYQEQLADFIRSRAGIIRKVDAHRLKEGLTRWFPGQGPGNGPDMQRVAAV 162 Query: 979 MILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA-- 1036 L F+V+ G G GKT +++ + E+ V PT +A + A Sbjct: 163 SALTHD--FSVITGGPGTGKTLTAARILALLAEQAENRPLAAVLTAPTGKAAARLGEAMS 220 Query: 1037 ---------------GVDAQTLASFLHDTQLQ--QRSGETPDFSNTLFLLDESSMVGNTD 1079 V A T+ L R + + ++DE+SM Sbjct: 221 TLRGAVPGPASENRLEVRACTIHRLLGALPGTTVFRHHRHNPIAADVVVVDEASMADVAL 280 Query: 1080 MARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREA 1139 MA+ R + GD DQL ++A G F + + R + + +A Sbjct: 281 MAKMVD-ALPDHCRLILVGDKDQLASVAAGSVFADICGAAGRN--------RFSADFLQA 331 Query: 1140 VYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGE 1199 + + L+G P+ R G +V F H ++ + GE Sbjct: 332 LEAA------GVLTGGMKAFPAGTARLAGNVVHLETVYRFEHRGGMEMVSRLVREGAAGE 385 Query: 1200 AFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQV 1259 + T ++D Sbjct: 386 IVE-------------------------ALATPGHQDVTW-------------------- 400 Query: 1260 MVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLI 1319 + R+ R ++ W +D L + N + + L L++ + Sbjct: 401 --TAPDQEEWRERLARTVTAW--VKDCLSVSANPEMVLDRLGSFRVLCALREGPAGALAL 456 Query: 1320 SPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQ 1379 + + G + K+D V +T GD +++ Sbjct: 457 NRSVEHSLQRAGVVASGRLWYAGRPVMVLKNDYSLELFNGDVG-ITLWDGDRLSVFFKDD 515 Query: 1380 TREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRM 1439 +R + YA+T H QG+ + + + E Y AL+R Sbjct: 516 RGGVRKFHPGRIPEHETVYAMTVHKGQGSEFEKVVFVMPDRDG--PVLTRELVYTALTRA 573 Query: 1440 KQHVQVYTDNRQGWTDAINNAVQKGTAH 1467 + H+++ + A++ +V + + Sbjct: 574 RSHIEII-GKKDIIEAAVSRSVSRRSGL 600 Score = 116 bits (289), Expect = 1e-23, Method: Composition-based stats. Identities = 63/558 (11%), Positives = 126/558 (22%), Gaps = 54/558 (9%) Query: 305 TPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEA 364 G D +T + G+S + + D+L+R+ + P G Sbjct: 48 RRGHVCFDLNRADAFLTDGLDGVSLPDGR-QWADILSRSAVVARPGGDPAPLVLDGEGRL 106 Query: 365 ISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYSDAVS 424 ++ S ++ ++ + + + + A Sbjct: 107 YLHRYWAYQEQLADFIRSRAGIIRKVD----AHRLKEGLTRWFPGQGPGNGPDMQRVAAV 162 Query: 425 VLAQDRPSLAIVSGQGGAAGQR----ERVAELVMMAREQGREVQIIAADRRSQMNMKQD- 479 S+ G G+ +A L A + + A ++ + + Sbjct: 163 SALTHDFSVIT---GGPGTGKTLTAARILALLAEQAENRPLAAVLTAPTGKAAARLGEAM 219 Query: 480 ---------------ERLSGELITGRRQLLEGMAFTPG--------STVIVDQGEKLSLK 516 + I L G V+VD+ + Sbjct: 220 STLRGAVPGPASENRLEVRACTIHRLLGALPGTTVFRHHRHNPIAADVVVVDEASMADVA 279 Query: 517 ETLTLLDGAARHNVQVLITDSGQR--TGTGSALMAMK-DAGVNTYRWQGGEQRPATIISE 573 ++D H +L+ D Q GS + AG N + + A + Sbjct: 280 LMAKMVDALPDHCRLILVGDKDQLASVAAGSVFADICGAAGRNRFSADFLQALEAAGVLT 339 Query: 574 PDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELK--TQGVLGLPEVTM 631 A A AG + E + + ++ G + T Sbjct: 340 GGMKAFPAGTAR------LAGNVVHLETVYRFEHRGGMEMVSRLVREGAAGEIVEALATP 393 Query: 632 TALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDA--QGE 689 W R+ + + + S + ++ L G Sbjct: 394 GHQDVTWTAPDQEEWRERLARTVTAWVKDCLSVSANPEMVLDRLGSFRVLCALREGPAGA 453 Query: 690 TQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVV 749 + R + G + V L + GD + Sbjct: 454 LALNRSVEHSLQRAGVVASGRLWYAGRPVMVLKNDYSLELFNGDVGITLWDGDRLSVFFK 513 Query: 750 PGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFAS---VTQMAMDNATLNGLA 806 R P + G VF + L Sbjct: 514 DDRGGVRKFHPGRIP--EHETVYAMTVHKGQGSEFEKVVFVMPDRDGPVLTRELVYTALT 571 Query: 807 RSGRDVRLYSSLDETRTA 824 R+ + + D A Sbjct: 572 RARSHIEIIGKKDIIEAA 589 >UniRef50_A1SFN3 ATP-dependent exoDNAse (Exonuclease V) alpha subunit-helicase superfamily I member-like n=2 Tax=Nocardioides sp. JS614 RepID=A1SFN3_NOCSJ Length = 872 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 136/916 (14%), Positives = 246/916 (26%), Gaps = 125/916 (13%) Query: 10 AGSAGNYY-----TDKDNYYVLGSMG--ERWAGRGAEQLGLQGSVDKDVFTRLLEGRLPD 62 A A Y + D+YY+ G ER A G GS+D D + + + G D Sbjct: 11 AAKAARAYVERDCSRADDYYLGEGTGVAERLTATPAGVAG-AGSMDGDEYEQWVAGIDID 69 Query: 63 GADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGD--KRLIDAHNQAVDFAVRQVEAL 120 ++T + PK+ S+ A L + + L A ++A + V + Sbjct: 70 TGCKKGRVREDANALRFVEVTVNGPKTWSLAAALHPEVSEALDGAQDRAAEQIVGWLALH 129 Query: 121 ASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDKV 180 A+TRV G+ V + A+ H TSR +P H H V G W+ L S V Sbjct: 130 ATTRVGPRGRQVQVPVERIEAAVIRHYTSRAGDPHRHLHLQVNARVFAAGAWRGLHSVGV 189 Query: 181 GKTGF-IENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVEAFSGRSQ 239 I + +A +R L + G+ + + G E V AFS R+ Sbjct: 190 RDMIEAINGIGHAAVATDPEFRAVLAAR----GFTLDP--ETGEIEQLAPYVGAFSARTS 243 Query: 240 TI------------REAVGEDASLKSRDV----AALDTRKSK-QHVDPEIKMAEWMQTLK 282 I RE GE+ + R+ A D R K +A W L+ Sbjct: 244 QIHRNIDRYEAEWRREHPGEEPGPRLREAWDRRAWADARPDKVVPTGGADLVARWNDELR 303 Query: 283 ETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLAR 342 G+ R D A ++ L ++ + D+ + Sbjct: 304 ALGY-----------RDPAAPAVLETTQVGRIDRDGAAEWVVSQLGAKRSAWNTADIRGK 352 Query: 343 TVGILPPENGVI----------ERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSV 392 +L N V + + L TS V E V Sbjct: 353 VELLLAQTNLVTTPAARIELAEDVTARAAARCVRLLATPDLPEHVRSLTSQQVVNVEADV 412 Query: 393 RALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAEL 452 ++ V + + A V A +V AG+ + Sbjct: 413 VGRLARRAEKPARRVRLQGRGLVRVDPTQAAVVGALAGDGQLVVVEGAAGAGKTTALRAT 472 Query: 453 VMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLE----------------- 495 + G + ++ ++ + G Sbjct: 473 RELLARHGHRLVVVTPTLKAAEVAAAETGADGRSAAWLIHQHGWRWDADGHWARRPDTTP 532 Query: 496 --GMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMKDA 553 PG +++D+ L LL A +V + + + A Sbjct: 533 DAAARLRPGDLLLIDEAGMLDQDTARALLTIADEAGARVALVGDRHQLPAVGRGGVLDHA 592 Query: 554 GVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQA 613 ++ + D D+AA A Sbjct: 593 LAWSH--PTSVVSLQKVHRFTDP---------DYAALSLRMRTGNHPA-----------A 630 Query: 614 IRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDR 673 + L +G + + + + + R + Sbjct: 631 VFDALHRRGSILIHPSEAERTAALAEAGA----------------AGDLVLADTREHVAS 674 Query: 674 VTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGD 733 + A + + S R E++ V G+R+ P L V+ Sbjct: 675 LNAAIRD--------QRRADPARDPAESMVTARGERIGV--GDRVATRRNDPDLGVANRQ 724 Query: 734 RLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVT 793 ED V+ + + ++ ++L + ++ Sbjct: 725 TWTAIGFGEDGSLVLRGRGRD--RVVPTEYANRFVELAYATTVHGAQGETVD-RAHVAIG 781 Query: 794 QMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAI 853 A + R D + + A KL ++ A ++E Sbjct: 782 DTTGAAAAYVAMTRGRLDNTAHLVAESVEDARKLWVEVFGRDRADLGPAHAKRQAIEAVD 841 Query: 854 SHQKSALHTPAQQAIH 869 + Q+ + Sbjct: 842 RYGTQKRRLSRQETVE 857 Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats. Identities = 68/471 (14%), Positives = 127/471 (26%), Gaps = 28/471 (5%) Query: 804 GLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTP 863 G R + +++++ A+ Sbjct: 266 GPRLREAWDRRAWADARPDKVVPTGGADLVARWNDELRALGYRDPAAPAVLETTQVGRID 325 Query: 864 AQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEIN-------AQIKRGD 916 A + + +K+ A++ D+ + + A+ T I R Sbjct: 326 RDGAAEWVVSQLGAKRSAWNTADIRGKVELLLAQTNLVTTPAARIELAEDVTARAAARCV 385 Query: 917 LLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAA 976 L L S+ E ++ + E + R+ G + ++ Q AA Sbjct: 386 RLLATPDLPEHVRSLTSQQVVNVEADVVGRLARRAEKPARRV-RLQGRGLVRVDPTQ-AA 443 Query: 977 TRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMR-S 1035 L + VV+G AG GKTT RA + R+V + PT +A Sbjct: 444 VVGALAGDGQLVVVEGAAGAGKTTALRATRELLAR----HGHRLVVVTPTLKAAEVAAAE 499 Query: 1036 AGVDAQTLASFLHDTQLQQRSGET-------------PDFSNTLFLLDESSMVGNTDMAR 1082 G D ++ A +H + + L L+DE+ M+ Sbjct: 500 TGADGRSAAWLIHQHGWRWDADGHWARRPDTTPDAAARLRPGDLLLIDEAGMLDQDTARA 559 Query: 1083 AYALIAAGGGRAVASGDTDQLQAIAPGQPF-RLQQTRSAADVAIMKEIVRQTPELREAVY 1141 + G R GD QL A+ G V ++++ R T A+ Sbjct: 560 LLTIADEAGARVALVGDRHQLPAVGRGGVLDHALAWSHPTSVVSLQKVHRFTDPDYAALS 619 Query: 1142 SLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAF 1201 + A + + ++ E + + LA+ ++ A Sbjct: 620 LRMRTGNHPAAVFDALHRRGSILIHPSEAERTAALAEAGAAGDLVLADTREHVASLNAAI 679 Query: 1202 PDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAG 1252 D + R + L G Sbjct: 680 RDQRRADPARDPAESMVTARGERIGVGDRVATRRNDPDLGVANRQTWTAIG 730 Score = 75.8 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 69/462 (14%), Positives = 119/462 (25%), Gaps = 42/462 (9%) Query: 1082 RAYALIAAGGGRAVASG------DTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPE 1135 R R G D Q + A A +R T E Sbjct: 415 RLARRAEKPARRVRLQGRGLVRVDPTQAAVVGALAGDGQLVVVEGAAGAGKTTALRATRE 474 Query: 1136 L----------------REAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEF 1179 L V + R+ + L + + + Sbjct: 475 LLARHGHRLVVVTPTLKAAEVAAAETGADGRSAAWLIHQHGWRWDADGHWARRPDTTPDA 534 Query: 1180 SHSQEAKLAEAQQKAMLKGEAFPDVPMTLYE------AIVRDYTGRTPEAREQTLIVTHL 1233 + +A + + +T+ + A+V D R L Sbjct: 535 AARLRPGDLLLIDEAGMLDQDTARALLTIADEAGARVALVGDRHQLPAVGRGGVLDHALA 594 Query: 1234 NED---RRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLV 1290 L + L + + + + Sbjct: 595 WSHPTSVVSLQKVHRFTDPDYAALSLRMRTGNHPAAVFDALHRRGSILIHPSEAERTAAL 654 Query: 1291 DNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKS 1350 + D A ++ T R+G GDR+ ++ Sbjct: 655 AEAGAAGDLVLADTREHVASLNAAIRDQRRADPARDPAESMVTARGERIGVGDRVATRRN 714 Query: 1351 DRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASE 1410 D + G WT D + G+ + P E A + ++LAYA T HGAQG + Sbjct: 715 DPDLGVANRQTWTAIGFGEDGSLVLRGRGRDRVVPT-EYANRFVELAYATTVHGAQGETV 773 Query: 1411 TFAIALEGTEGNRKLMAGFESAYVALSRMK--QHVQVYTDNRQGWTDAINNAVQKGTAHD 1468 A G G +AYVA++R + + ++ + + A D Sbjct: 774 DRAHVAIGD------TTGAAAAYVAMTRGRLDNTAHLVAESVEDARKLWVEVFGRDRA-D 826 Query: 1469 VFEPKPDREVMNAERLFSTA-RELRDVAAGRAVLRQAGLAGG 1509 + R+ + A + T R L R A +GG Sbjct: 827 LGPAHAKRQAIEAVDRYGTQKRRLSRQETVEEPRRPAPASGG 868 >UniRef50_C8PVE9 Exodeoxyribonuclease V, alpha subunit n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PVE9_9GAMM Length = 653 Score = 250 bits (637), Expect = 5e-64, Method: Composition-based stats. Identities = 72/567 (12%), Positives = 160/567 (28%), Gaps = 96/567 (16%) Query: 933 SRASYEAEKSILRHILEGKEAVMPLMERVPG----ELMEKLTSGQRAATRMILETSDRFT 988 + AE+S+ + +++ + + + + Q+ A + + Sbjct: 144 LHRQWHAEQSLAKQLMKIAHRKVAAFSGISASQDIDNGLAPNAMQQLAIEK--SSQHALS 201 Query: 989 VVQGYAGVGKTTQFRAVMSAVNMLPESERPR--------VVGLGPTHRAVGEMRSAGV-- 1038 ++ G G GKT +++ + E +R + + PT +A M+ + Sbjct: 202 IIIGGPGTGKTFTVAKLVTTLQKEHEHKRKQDPNLPPLSITLTAPTGKAAQRMQQSLRIS 261 Query: 1039 -------------DAQTLASFLH-DTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAY 1084 +A+TL L + R + L ++DE+SM+G ++ Sbjct: 262 LQKSLQDEEITLDNAKTLHRLLGIGSDGTPRYHAKNPLPDDLIIVDEASMLGLELASQLV 321 Query: 1085 ALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQT--RSAADVAIMKEIVRQTPELREAVYS 1142 I G R + GD +QL A+ G R + + E R ++ Sbjct: 322 DAIKPTG-RLILLGDANQLAAVDAGSVLSDLCAVTRLQPYITELTESKRFDSNSVVGQFA 380 Query: 1143 LINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFP 1202 L + L + +K Q Q + A + Sbjct: 381 LAIQQN---LPAPKKIKLIQRLLQPIDLQAIKPSQSENPPDLAGKTQQTANIPFYPIDAS 437 Query: 1203 DVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVP 1262 + ++ + + Y ++ Sbjct: 438 SSLLAVFNQLAKPY--------------------------------------HPFFALMQ 459 Query: 1263 VLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPR 1322 + + D+ ++ + G + ++L E Sbjct: 460 QWYSQPVNIFAADNRKGLFEVFDSYRILCAGHQGQLGTQSINQKMSLAFTE--------- 510 Query: 1323 EAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTRE 1382 + T G + +D + G + G + Sbjct: 511 ------FSKITRTKAYFYHGLPIIIQNNDYQLGLFNGDIAICLLYQGQLYACFAEK---- 560 Query: 1383 IRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQH 1442 + P Q + + D AYA+T H +QG+ + Y A++R K Sbjct: 561 VIPIQRLSRESCDYAYAMTIHKSQGSEFHTVAICID--KAHTRLLSQALIYTAVTRSKSA 618 Query: 1443 VQVYTDNRQGWTDAINNAVQKGTAHDV 1469 + +Y+ ++ + A+ + T + Sbjct: 619 LSIYSA-KENFELAVTQKAVRQTGLQL 644 Score = 151 bits (380), Expect = 3e-34, Method: Composition-based stats. Identities = 61/509 (11%), Positives = 133/509 (26%), Gaps = 85/509 (16%) Query: 378 GLFTSGIHVLDELSVRALSRDIMKQNR-VTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIV 436 + + + +L A + + + + A A+ + +L+I+ Sbjct: 146 RQWHAEQSLAKQLMKIAHRKVAAFSGISASQDIDNGLAPNAMQQLAIEK--SSQHALSII 203 Query: 437 SGQGGAAGQRERVAELVMMAREQG------------REVQIIAADRRSQMNMKQDERLS- 483 G G G+ VA+LV +++ + + A ++ M+Q R+S Sbjct: 204 IGGPG-TGKTFTVAKLVTTLQKEHEHKRKQDPNLPPLSITLTAPTGKAAQRMQQSLRISL 262 Query: 484 -------------GELITGRRQ-------LLEGMAFTPGSTVIVDQGEKLSLKETLTLLD 523 + + P +IVD+ L L+ L+D Sbjct: 263 QKSLQDEEITLDNAKTLHRLLGIGSDGTPRYHAKNPLPDDLIIVDEASMLGLELASQLVD 322 Query: 524 GAARHNVQVLITDSGQRTGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARL 583 ++++ + A + D T + + + + V L Sbjct: 323 AIKPTG-RLILLGDANQLAAVDAGSVLSDLCAVTRLQPYITELTESKRFDSNSVVGQFAL 381 Query: 584 AGDFAASVKAGEESVAQVSGVREQAIL-------------------------TQAIRSEL 618 A + + ++ + + A S L Sbjct: 382 AIQQNLPAPKKIKLIQRLLQPIDLQAIKPSQSENPPDLAGKTQQTANIPFYPIDASSSLL 441 Query: 619 KTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQS 678 L P AL W R G D Y I Q Sbjct: 442 AVFNQLAKPYHPFFALMQQWYSQPVNIFAADNRKG--------LFEVFDSYRILCAGHQG 493 Query: 679 HSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVA 738 T ++ ++S + +S K G + + L + GD Sbjct: 494 QLGT------QSINQKMSLAFTEFSKITRTKAYFYHGLPIIIQNNDYQLGLFNGDIAICL 547 Query: 739 SVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHS---VSDSATVFASVTQM 795 + + + +P+ + + + + + T++ Sbjct: 548 -LYQGQLYACF----AEKVIPIQRLSRESCDYAYAMTIHKSQGSEFHTVAICIDKAHTRL 602 Query: 796 AMDNATLNGLARSGRDVRLYSSLDETRTA 824 + RS + +YS+ + A Sbjct: 603 LSQALIYTAVTRSKSALSIYSAKENFELA 631 >UniRef50_UPI00016C53CF TrwC protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C53CF Length = 818 Score = 249 bits (636), Expect = 6e-64, Method: Composition-based stats. Identities = 121/853 (14%), Positives = 243/853 (28%), Gaps = 150/853 (17%) Query: 139 LVMALFNHDTSRDQ------EPQLHTHAVVANVTQH--NGEWKTLSSDKVGKTGFIENVY 190 +V H +R + LH H V N T G+WK + + Sbjct: 1 MVAYAVTHRDTRINADDSMPDMNLHKHCFVFNATYDADEGKWKA---------AEVGQLK 51 Query: 191 ANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVEA---FSGRSQTIREAVGE 247 + + +Y +L V+ LGY E GK +E+ G+ E FS R Q I + Sbjct: 52 KDAPYYEAIYANRLAANVKDLGYGIERRGKS--FEITGISQELRDKFSRRKQYIDMVAKK 109 Query: 248 DAS--LKSRDVAALDTRKSKQHVDPEIK------MAEWMQTLKETGFDIRAYRDAADQRA 299 +SR TR K + + + + + R + A Sbjct: 110 LGITNPESRAKLGATTRLQKSKELADDLQPYYSSRLAPQEKQQLASLEGKLSRATTTEAA 169 Query: 300 DLRTLTPGPASQDGPDVQQAVTQAIAGL-----------SERKVQFTYTDVLARTVGILP 348 + Q + ++ AI ++ + A T G+L Sbjct: 170 VAFAIGHMFERQSVVNEKRLYETAIRHGIGWVTPEEVQQEAKRQGLLVRNGEATTRGVLA 229 Query: 349 PENGVIERARAGIDEAISREQLIPLD--------------------REKGLFTSGIHVLD 388 E+ VI AR G LD G + VLD Sbjct: 230 EESRVIAFARDGKGTCRPMGAATRLDESPNNTRIMVGMQGPGRGDPGHTGADVAIPAVLD 289 Query: 389 EL---------SVRALSRDIMKQNRVTVHPEK----------SVPRTAGYSDAVSVLAQD 429 + R + T+ PE+ S + + + Sbjct: 290 QQQKGRPDESKRPMPALRQGFISDTATLSPEQQAGFDKDIHVSSKLSPEQASIARHVWNS 349 Query: 430 RPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLS-GELIT 488 + ++ G G G+ + R V ++A + + + E + + + Sbjct: 350 PDRVILIRGAAG-TGKTHTMKTTFAGID---RPVVVLAPSADASRGVLRKEGFTNADTVA 405 Query: 489 GRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGT---GS 545 E + VD+ L +++T + D A + N +V++ Q+ G+ G+ Sbjct: 406 RFLIDQEFQHKAKNGVIWVDEAGLLGMRQTRQVFDLAEKLNARVVLQGDKQQHGSIERGT 465 Query: 546 ALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAG----------- 594 L ++ +R E + ++ + G Sbjct: 466 TLRVLEQFAGLPVAQLTDIRRQKGRYKEAVTALSKGKMLAGYDTLNDLGWVKSTTGNTPL 525 Query: 595 ------------------EESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSP 636 + +A E A +T AIR L+ +G++ E + L P Sbjct: 526 VDEYMEAIDTKRADQDITDRVLAIAPTHAEAAEVTDAIRLRLQERGIVAKEEHEIQTLVP 585 Query: 637 VWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRIS 696 + R Y V++ + + Sbjct: 586 LHWTEAERGDLSRYEGTEVVQYHRNGGTQKAGQRVAIADFKPGMRL-------------- 631 Query: 697 SLDSSWSLFRPEKMPVADGERLRVTG----KIPGLRVSGGDRLQVASVSEDAMTVVVPGR 752 S++S++ + +A G+R+R+T ++ G +V E V+ Sbjct: 632 GPASTFSVYGKNTIKLAAGDRIRITAPGKSADTKHKLDNGTLYEVKGFDEKGGIVLNNDW 691 Query: 753 AEPATLPVSDSPFTALKLENGWVETPGHSVSDSA-TVFASVTQMAM----DNATLNGLAR 807 L +G+V T S + V ++ Q ++ ++R Sbjct: 692 ---------TLAPDFAHLTHGYVTTSHASQGKTVDKVLIAMGQESLPAISAEQFYVSVSR 742 Query: 808 SGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQA 867 +++ + E + + + +E + + A + Sbjct: 743 GRDKATIFTDVPTPELREAIQKADTRKSATELFNPLPRNRMYAI-LKRAREAFQALRTRH 801 Query: 868 IHLALPVVESKKL 880 + + ++L Sbjct: 802 VTATHERDKQREL 814 Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 104/539 (19%), Positives = 190/539 (35%), Gaps = 79/539 (14%) Query: 968 KLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTH 1027 KL+ Q + R + + DR +++G AG GKT + + ++ VV L P+ Sbjct: 334 KLSPEQASIARHVWNSPDRVILIRGAAGTGKTHTMKTTFAGIDR-------PVVVLAPSA 386 Query: 1028 RAVG-EMRSAGVD-AQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYA 1085 A +R G A T+A FL D + Q ++ N + +DE+ ++G + + Sbjct: 387 DASRGVLRKEGFTNADTVARFLIDQEFQHKA------KNGVIWVDEAGLLGMRQTRQVFD 440 Query: 1086 LIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLIN 1145 L R V GD Q +I G R+ + + VA + +I RQ +EAV +L Sbjct: 441 LAEKLNARVVLQGDKQQHGSIERGTTLRVLEQFAGLPVAQLTDIRRQKGRYKEAVTALSK 500 Query: 1146 RDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVP 1205 + L + + + L + +A+ A D+ Sbjct: 501 GKMLAGYDTLNDLGWVKST-----------------TGNTPLVDEYMEAIDTKRADQDIT 543 Query: 1206 MTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLN 1265 + + + + + I ++ G + KE+ + L Sbjct: 544 DRVLA-------------------IAPTHAEAAEVTDAIRLRLQERGIVAKEEHEIQTLV 584 Query: 1266 TANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAV 1325 + + E LS +E + G K + + D + RL Sbjct: 585 PLHWTEAERGDLSRYEGTEVVQYHRNG------GTQKAGQRVAIADFKPGMRL-----GP 633 Query: 1326 AEGVTLYTPDTIRVGTGDRMRFTK----SDRERGYVANSVWTVTAVSGDSVTLSDGQQTR 1381 A ++Y +TI++ GDR+R T +D + +++ V + + Sbjct: 634 ASTFSVYGKNTIKLAAGDRIRITAPGKSADTKHKLDNGTLYEVKGFDEKGGIVLNNDW-- 691 Query: 1382 EIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQ 1441 H+ Y T+H +QG + + G E E YV++SR + Sbjct: 692 ----TLAPDFAHLTHGYVTTSHASQGKTVDKVLIAMGQESLPA--ISAEQFYVSVSRGRD 745 Query: 1442 HVQVYTD-NRQGWTDAINNAVQKGTAHDVFEPKPDRE----VMNAERLFSTARELRDVA 1495 ++TD +AI A + +A ++F P P + A F R A Sbjct: 746 KATIFTDVPTPELREAIQKADTRKSATELFNPLPRNRMYAILKRAREAFQALRTRHVTA 804 >UniRef50_P55418 Probable conjugal transfer protein traA n=16 Tax=Rhizobiaceae RepID=TRAA_RHISN Length = 1102 Score = 249 bits (636), Expect = 6e-64, Method: Composition-based stats. Identities = 146/873 (16%), Positives = 252/873 (28%), Gaps = 166/873 (19%) Query: 861 HTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYV 920 Q+ + L ++ +K F D+ + + F L I K L Sbjct: 267 ARRIQRRPEIVLDLITREKSVFDERDVAKILHRYIDDPGVFHSLMARILQSPKTLRLERE 326 Query: 921 DVAKGYGTG---LLVSRASYEAEKSILRHI----LEGKEAVMPLMERVPGELMEKLTSGQ 973 +A G +R E + V + +L+ Q Sbjct: 327 RIAFATGIRAPAKYTTRELIRLEAEMGSRAIWLSRRSSHGVRKEVLEAAFSRHSRLSDEQ 386 Query: 974 RAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM 1033 + A + ++R V G AG GKTT +A A E+ RVVG +A + Sbjct: 387 KTAIEHV-AGAERIAAVIGRAGAGKTTMMKAAREA----WEAAGYRVVGGALAGKAAEGL 441 Query: 1034 R-SAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGG 1092 AG+ ++TL+S+ +L+ G T+F+LDE+ MV + MA G Sbjct: 442 EKEAGIASRTLSSW----ELRWNEGRKQLDDKTIFVLDEAGMVSSRQMALFVETATKAGA 497 Query: 1093 RAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPEL-REAVYSLINRDVERA 1151 + V GD +QLQ I G FR R A ++ I RQ + +A L +V + Sbjct: 498 KLVLVGDPEQLQPIEAGAAFRAIADR--IGYAELETIYRQREQWMCDASLDLARGNVGKV 555 Query: 1152 LSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEA 1211 + + M++ E + L Sbjct: 556 VDTYRANGR----------------------------------MMRSELKAEAVQNLIAD 581 Query: 1212 IVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRD 1271 RDY + + TLI+ HL D R+LN M + G + Sbjct: 582 WDRDY-----DPTKTTLILAHLRRDVRMLNQMARAKLVERGIVDAGFSFKAEDGNRRFAP 636 Query: 1272 GELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTL 1331 G+ + + AL + + + ++ + I + E R E+ Sbjct: 637 GDQIV---FLKNEGALGVKNGMRGKV--VEAAQNRIVAEIGEVEHRRQVMVESRFYNNLD 691 Query: 1332 YTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAE 1391 + T+ G +V R + Sbjct: 692 H--------------------------GYATTIHKSQGATV-------DRVKVLASLSLD 718 Query: 1392 QHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNR- 1450 +H+ A+T R ++ + VY R Sbjct: 719 RHLTYV-AMT------------------------------------RHREDLGVYYGARS 741 Query: 1451 ----QGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLR---- 1502 G ++ K T D + R+ + F+ AR + V R + R Sbjct: 742 FAKSGGLIQILSQKNSKETTLDYEKATFYRQAL----RFAEARGMHLVNVARTIARDRLE 797 Query: 1503 ---QAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPL-------TTDDGN 1552 + D R +A G ++ A +N K + + + Sbjct: 798 WTVRQKQKLADLTQRLVAIGARFGLAVGAKTTNSQNLKETRPMVAGIATFPKSMEQAVAD 857 Query: 1553 GLRGFSGEGRVKGSGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIAGEGR 1612 L G + +F + E D + S + Sbjct: 858 RLEVDPGLKKQWEDVSTRFHLVYT--QPEVAFKAVNVDAMLKDETVAKSALSNMANQPES 915 Query: 1613 PWNPGAITG--GRVWGDIPDNSVQPGAGNGEPVTAEVLAQRQAEEAIRRETERRADEIVR 1670 + TG + ++ + QR E + E R Sbjct: 916 YGSLKGKTGLLASRADKQDRERAERNVPALAQSLSDYMRQRSRAEQCYQADELAVR---R 972 Query: 1671 KMAENKPDLPDG--KTEQAVREIAGQERDRAAI 1701 K+A P L G +T + VR+ + AA+ Sbjct: 973 KVAIEIPALSPGARQTLERVRDAIDRNDLPAAL 1005 Score = 164 bits (413), Expect = 4e-38, Method: Composition-based stats. Identities = 79/759 (10%), Positives = 219/759 (28%), Gaps = 71/759 (9%) Query: 285 GFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTV 344 + +A D + L +++ +Q+ + ++ K F DV A+ + Sbjct: 239 AIERKATTDDQAVSLERLELQEEKRAENARRIQRRPEIVLDLITREKSVFDERDV-AKIL 297 Query: 345 GILPPENGVIERARAGIDEAISREQLIPLDREK----------GLFTSGIHVLDELSVRA 394 + GV A I + + + L+RE+ +T+ + E + + Sbjct: 298 HRYIDDPGVFHSLMARI---LQSPKTLRLERERIAFATGIRAPAKYTTRELIRLEAEMGS 354 Query: 395 LSRDIMKQNRVTVHPE-------KSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRE 447 + + +++ V E + + A+ +A +A V G+ G AG+ Sbjct: 355 RAIWLSRRSSHGVRKEVLEAAFSRHSRLSDEQKTAIEHVAGA-ERIAAVIGRAG-AGKTT 412 Query: 448 RVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGR--RQLLEGMAFTPGSTV 505 + G V A ++ ++++ ++ ++ R + Sbjct: 413 MMKAAREAWEAAGYRVVGGALAGKAAEGLEKEAGIASRTLSSWELRWNEGRKQLDDKTIF 472 Query: 506 IVDQGEKLSLKETLTLLDGAARHNVQVLITDSG---QRTGTGSALMAMKD----AGVNTY 558 ++D+ +S ++ ++ A + ++++ Q G+A A+ D A + T Sbjct: 473 VLDEAGMVSSRQMALFVETATKAGAKLVLVGDPEQLQPIEAGAAFRAIADRIGYAELETI 532 Query: 559 RWQGGEQRPAT---------------------IISEPDRNVRYARLAGDFAASVKAGEES 597 Q + ++ + L D+ + + Sbjct: 533 YRQREQWMCDASLDLARGNVGKVVDTYRANGRMMRSELKAEAVQNLIADWDRDYDPTKTT 592 Query: 598 VAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVME 657 + R+ +L Q R++L +G++ + A + +R + + Sbjct: 593 LILAHLRRDVRMLNQMARAKLVERGIVD-AGFSFKA------EDGNRRFAPGDQIVFLKN 645 Query: 658 QWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADG-- 715 + ++ R + + + + QV+ S ++ + + G Sbjct: 646 EGALGVKNGMRGKVVEAAQNRIVAEIGEVEHRRQVMVESRFYNNLDHGYATTIHKSQGAT 705 Query: 716 -ERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATL-PVSDSPFTALKLENG 773 +R++V + R + + +S L+ Sbjct: 706 VDRVKVLASLSLDRHLTYVAMTRHREDLGVYYGARSFAKSGGLIQILSQKNSKETTLDYE 765 Query: 774 WVETPGH--SVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHP 831 +++ + + L R + + + A Sbjct: 766 KATFYRQALRFAEARGMHLVNVARTIARDRLEWTVRQKQKLADLTQRLVAIGARFGLAVG 825 Query: 832 SFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESK----KLAFSMVDL 887 + T S+ +K + + E L ++ ++ Sbjct: 826 AKTTNSQNLKETRPMVAGIATFPKSMEQAVADRLEVDPGLKKQWEDVSTRFHLVYTQPEV 885 Query: 888 LTEAKSFAAEGTGFTELGGEINAQIKRGDLL-YVDVAKGYGTGLLVSRASYEAEKSILRH 946 +A + A T ++ + + + G + AE+++ Sbjct: 886 AFKAVNVDAMLKDETVAKSALSNMANQPESYGSLKGKTGLLASRADKQDRERAERNVPAL 945 Query: 947 ILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSD 985 + + ++L ++ A + + Sbjct: 946 AQSLSDYMRQRSRAEQCYQADELAVRRKVAIEIPALSPG 984 >UniRef50_B9QRK8 Ti-type conjugative transfer relaxase TraA, putative n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QRK8_9RHOB Length = 1091 Score = 249 bits (636), Expect = 6e-64, Method: Composition-based stats. Identities = 150/917 (16%), Positives = 280/917 (30%), Gaps = 177/917 (19%) Query: 850 ETAISHQKSALHT--PAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGE 907 E ++ H +S L + + + + +K F D+ + + F +L Sbjct: 226 ERSVWHAESRLENVRRITRRPEIVIDAITREKSVFDERDIAKYLHRYVDDEAKFQDLLAR 285 Query: 908 INAQIKRGDLLYV---DVAKGYGTGLLVSRASYEAEKSILRHILE----GKEAVMPLMER 960 + L SR E + R V + Sbjct: 286 VLNSPDVVILAVEAVDPETDEMEPAKFTSREMMRLEAEMARRADHLVSVSSHGVDARLRD 345 Query: 961 VPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRV 1020 ++KL+ QR A I +R V G AG GKTT + A + E+ +V Sbjct: 346 RMLSSVQKLSDEQRVAIERI-TGEERMASVVGRAGAGKTTMMK----AAREVWEANGYQV 400 Query: 1021 VGLGPTHRAVGEMR-SAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTD 1079 VG +A + AG+ ++TLAS+ QL GE ++F++DE+ MV + Sbjct: 401 VGAALAGKAAEGLEKEAGIASRTLASW----QLSWGRGEGLPDKKSVFVIDEAGMVDSRQ 456 Query: 1080 MARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPEL-RE 1138 M+ IA G + V GD +QLQ I G FR R+ A + I RQ + R+ Sbjct: 457 MSVFVETIAKAGAKLVLVGDAEQLQPIEAGAAFRSLTDRTG--YAELGTIYRQREQWMRD 514 Query: 1139 AVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKG 1198 A L DV A+ +S + Sbjct: 515 ASMDLARGDVVTAIRAYQSNGHVINMPLKDQVF--------------------------- 547 Query: 1199 EAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQ 1258 L + RDY + + L++ HL ED LN M V + G + + Sbjct: 548 -------GKLIDDWSRDY-----DPSKSMLMLAHLREDVYRLNRMARLVLIERGVIETGE 595 Query: 1259 VMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRL 1318 G+ + + + + + + R+ + L Sbjct: 596 KFRTEEGYRFFAVGDQIV---FLKNDRDMNVKNGMLGRVIEAGEGRIL------------ 640 Query: 1319 ISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQ 1378 + +G+ R + ++ Y T + D Sbjct: 641 ---------------AEIGDIGSDQIRRVEVN--QKTYRNVDHGYATTIHKSQGATVDKV 683 Query: 1379 QTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSR 1438 + ++H+ A+T R Sbjct: 684 K----VLATLSLDRHLTYV-AMT------------------------------------R 702 Query: 1439 MKQHVQVYTDNR-----QGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRD 1493 ++ V++Y G T+ ++ K T D + + ++ ++ +R L Sbjct: 703 HREDVKLYHGALSFAKNGGLTEVLSRKGAKDTTLDYAGSELYAQALS----YANSRGLYG 758 Query: 1494 VAAGRAVLRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNG 1553 + RA+++ + A+ G + G+ GI L L G Sbjct: 759 LRVARAMVQNQRRWFAEQKAKLSELGERL----------LSLGEKLGIGLTGL----ERG 804 Query: 1554 LRGFSGEGRVKGSGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRP 1613 L + + + Q G + A ++ D V ++ Sbjct: 805 LAEETNTVQRQSREHP--ATSQPWIAGVKMWAMSIPDAVET---------RLQSDATLTT 853 Query: 1614 WNPGAITGGRVWGDIPDNSVQPGAGNGEPVTAEVLAQRQAEEAIRRETERRADEIVRKMA 1673 R+ + P+ +V+ + + + AQ A + + + ++ Sbjct: 854 HWAEVQNRARLVYERPEQAVKA-MRIKDILKLDGEAQTTARDRLTEDLANTPEQFG--AL 910 Query: 1674 ENKPDLPDGKT-----EQAVREIAGQERDRAAITEREAALPEGVLREPQRVREAVR-EIA 1727 K + G+T EQA+ + D A + + E +R R+ R +I Sbjct: 911 RGKTGMLAGRTAREDREQALNNVPQLSDDVKTYIRLRAEIGDLRTVELERERDLSRIDIP 970 Query: 1728 RENLLQERLQQMERDMV 1744 + + E + RD + Sbjct: 971 ALSPVAETVLSRIRDAI 987 Score = 193 bits (489), Expect = 6e-47, Method: Composition-based stats. Identities = 79/697 (11%), Positives = 187/697 (26%), Gaps = 101/697 (14%) Query: 240 TIREAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKE---------TGFDIRA 290 R G+ +LK + + + G R Sbjct: 152 QYRAWAGDKETLKQWRELWSIHANKSLELAGHDARIDHRSYEAQGIELLPTSKIGVQARN 211 Query: 291 YRDAADQRADLRTLTP-----GPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVG 345 A + L ++ + + I ++ K F D+ Sbjct: 212 ISSQAKVQGREPGLERSVWHAESRLENVRRITRRPEIVIDAITREKSVFDERDIAKYLHR 271 Query: 346 ILPPENGVIERARAGIDEAISREQLIPL----------DREKGLFTSGIHVLDELSVRAL 395 + E + + + ++ ++ L + E FTS + E + Sbjct: 272 YVDDEA----KFQDLLARVLNSPDVVILAVEAVDPETDEMEPAKFTSREMMRLEAEMARR 327 Query: 396 SRDIMKQNRVTVHP-------EKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRER 448 + ++ + V + A+ + +A V G+ G AG+ Sbjct: 328 ADHLVSVSSHGVDARLRDRMLSSVQKLSDEQRVAIERI-TGEERMASVVGRAG-AGKTTM 385 Query: 449 VAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMA--FTPGSTVI 506 + + G +V A ++ ++++ ++ + + S + Sbjct: 386 MKAAREVWEANGYQVVGAALAGKAAEGLEKEAGIASRTLASWQLSWGRGEGLPDKKSVFV 445 Query: 507 VDQGEKLSLKETLTLLDGAARHNVQVLITDSG---QRTGTGSALMAMKD----AGVNTYR 559 +D+ + ++ ++ A+ ++++ Q G+A ++ D A + T Sbjct: 446 IDEAGMVDSRQMSVFVETIAKAGAKLVLVGDAEQLQPIEAGAAFRSLTDRTGYAELGTIY 505 Query: 560 WQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELK 619 Q + + + G+ A + ++ ++ + Sbjct: 506 RQREQWMRDASM------------------DLARGDVVTAIRAYQSNGHVINMPLKD--Q 545 Query: 620 TQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSH 679 G L Y P M R + R+ + Sbjct: 546 VFGKLIDD------------------WSRDYDPSKSMLMLAHL-----REDVYRLNRMAR 582 Query: 680 SLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVAS 739 + + ET + + A G+++ + V G +V Sbjct: 583 LVLIERGVIETGEKFRTEEGYRF---------FAVGDQIVFLKNDRDMNVKNGMLGRVIE 633 Query: 740 VSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDN 799 E + + V + T +++G+ T S + + +++D Sbjct: 634 AGEGRILAEIGDIGSDQIRRVEVNQKTYRNVDHGYATTIHKSQGATVDKVKVLATLSLDR 693 Query: 800 -ATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKS 858 T + R DV+LY L S + AG A+S+ S Sbjct: 694 HLTYVAMTRHREDVKLYHGALSFAKNGGLTEVLSRKGAKDTTLDYAGSELYAQALSYANS 753 Query: 859 ALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFA 895 + A+ + + A L + Sbjct: 754 R--GLYGLRVARAMVQNQRRWFAEQKAKLSELGERLL 788 >UniRef50_B4V4K9 Putative uncharacterized protein n=1 Tax=Streptomyces sp. Mg1 RepID=B4V4K9_9ACTO Length = 1359 Score = 249 bits (634), Expect = 1e-63, Method: Composition-based stats. Identities = 142/914 (15%), Positives = 272/914 (29%), Gaps = 124/914 (13%) Query: 79 GYDLTFSAPKSVSMMAMLGGDK---RLIDAHNQAVDFAVRQVEALASTRV----MTDGQS 131 G D+T PKS+S L G + R+ + +V AVR +E A+ + Q+ Sbjct: 247 GVDITLDLPKSISAAYGLAGAELAGRIEEDWLASVSEAVRALEEWAAYGMAGHHGDGQQA 306 Query: 132 ETVLTGNLVMALFNHDTSRD-----QEPQLHTHAVVANVTQH-NGEWKTLSSDKVGKTGF 185 E V T L+ H ++R +P LH H +A++ + +G+W+T++ Sbjct: 307 ERVATSGLIGWTTLHRSARPVDGSPGDPHLHVHVNIAHLAKCVDGKWRTIAGGG------ 360 Query: 186 IENVYANQIAFGRLYREKLKEQV-EALGYETEVVGKHGMWEMPGVPV---EAFSGRSQTI 241 E+++ + +L+ ++ E G E G G WE+ GV EAFS R + + Sbjct: 361 -EDLHRYAHLINEIAEGRLRARLIEGYGARFERSGSTGAWELAGVDEGLREAFSRRHRQV 419 Query: 242 REAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQR--- 298 + VGE A+ + + AA + ++K+ PE W A Sbjct: 420 IDLVGEGATRERQKTAARRSAETKEDAGPEAPREAWRTRAAAELGGEGAVDAMVAAALPG 479 Query: 299 ----ADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVI 354 A + GP D+ + + A GL+ + ++T V+A V LP Sbjct: 480 PDGSAPPLSAGGGPRMPGPADIAERIWDAAHGLTASRKTVSHTHVMAAVVRTLPYLLSTR 539 Query: 355 ERARAGIDEAISREQLIPLDR-------EKGLFTSGIHVLDELSVRALSRDIMKQNRVTV 407 + A + + L + +T V E +V + + ++ + Sbjct: 540 QLASLADEALAVGGHAVRLTDSNRGHHTHRQRYTHTTVVAAERTVIECATAGLGRHAARL 599 Query: 408 H-----------------PEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVA 450 ++ +A V L + V G G AG+ + Sbjct: 600 TVDAAEMTLASVEVANSTADRPFAFSAEQRAVVMRLLTAGHAADAVIGVAG-AGKTTLMQ 658 Query: 451 ELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGR-RQLLEGMAFTPGSTVIVDQ 509 G V + + N+ + + + R++ G +++D+ Sbjct: 659 AARTGWEAAGLSVVGASTAAVAAANLAAEAGIESRTVAAWTREISGGRGLHGVGVLVIDE 718 Query: 510 GEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMKDAGVNTYRWQGGEQRPAT 569 + + LL AA +V+ + G Sbjct: 719 AAMVDDRALAALLRHAAGTGTKVVAVGDPLQLRAVGIG-----GGFARVHQLVDGLTLTE 773 Query: 570 IISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEV 629 + D R A + G + A G + + Sbjct: 774 NRRQRDVVERAA------LQDWRTGARTGALA---------------AFAAHGRVHADDT 812 Query: 630 TMTALSPVWLDSRSRYLRDMYRP-GMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQG 688 AL+ + R P G V + R D ++ + +G Sbjct: 813 ATEALTSMLAAWNQARGRWSGDPHGQVSQLLLLAIRRADVATLNAGARAVLVASGELEEG 872 Query: 689 ETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLR-------VSGGDRLQVASVS 741 T + ++ A G+ + + R V G R V +V Sbjct: 873 RTYA-----------VAGGGRLRFAAGDLVHIRRNDYRSRRDRYAVDVLNGFRGVVLAVD 921 Query: 742 EDAMTVVVPGRAEP------ATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQM 795 +V R P +S +L + + T G + +A V + Sbjct: 922 ARQGVLVQWRRPRPAGGFVLREAWMSARDIAEGRLTHAYAMTIGSAQGLTAEVAIAYGLH 981 Query: 796 AMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISH 855 A + + ++R+ ++ LY LDE A + + ++ Sbjct: 982 ADSHTLYSAMSRARQESHLYLPLDELEDHPTRATLGAVRTDAGRLDRAVAAYGRILEADR 1041 Query: 856 QKSALHTPA----------------QQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGT 899 + + + + + L D A+ Sbjct: 1042 EDTMVTDELARIPDSRTGVRGKPVVTPWQQRPYGHLPEQHLTVRAADETAAAERAEQLAA 1101 Query: 900 GFTELGGEINAQIK 913 E + Sbjct: 1102 QHERRADEQQELLD 1115 Score = 61.6 bits (147), Expect = 3e-07, Method: Composition-based stats. Identities = 97/684 (14%), Positives = 164/684 (23%), Gaps = 59/684 (8%) Query: 1107 APGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQ 1166 G+ +Q R+ + A + + T + A + R ++ Sbjct: 650 GAGKTTLMQAARTGWEAAGLSVVGASTAAVAAANLAAEAGIESRTVAAWTREISGGRGLH 709 Query: 1167 EGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQ 1226 A L K A D I + Sbjct: 710 GVGVLVIDEAAMVDDRALAALLRHAAGTGTKVVAVGDPLQLRAVGIGGGFARVHQLVDGL 769 Query: 1227 TLIVTHLNEDRRVLNSMIHDVRE---KAGELGKEQVMVPVLNTANIRDGELRRLSTWETH 1283 T +T R V+ + G L V + L+ W Sbjct: 770 T--LTENRRQRDVVERAALQDWRTGARTGALAAFAAHGRVHADDTATEALTSMLAAWNQA 827 Query: 1284 RDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPD--TIRVGT 1341 R + + G ++ + EG T +R Sbjct: 828 RGRWSGDPHGQVSQLLLLAIRRADVATLNAGARAVLVASGELEEGRTYAVAGGGRLRFAA 887 Query: 1342 GDRMRFTKSDRER-------GYVANSVWTVTAVSGDSVTLSDGQQTR---------EIRP 1385 GD + ++D + V AV L ++ R Sbjct: 888 GDLVHIRRNDYRSRRDRYAVDVLNGFRGVVLAVDARQGVLVQWRRPRPAGGFVLREAWMS 947 Query: 1386 GQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQV 1445 ++ AE + AYA+T AQG + AIA + Y A+SR +Q + Sbjct: 948 ARDIAEGRLTHAYAMTIGSAQGLTAEVAIAYGLHADSHT-------LYSAMSRARQESHL 1000 Query: 1446 Y--TDNRQGWTDAINNAVQKGTA--HDVFEPKPDREVMNAERLFSTARELRDVAAGRAVL 1501 Y D + + A D R + EL + R + Sbjct: 1001 YLPLDELEDHPTRATLGAVRTDAGRLDRAVAAYGRILEADREDTMVTDELARIPDSRTGV 1060 Query: 1502 RQA------------GLAGGDSPARFIAPGRKYPQPYVALPAFDRN-GKSAGIWLNPLTT 1548 R L R + +R + + PL+ Sbjct: 1061 RGKPVVTPWQQRPYGHLPEQHLTVRAADETAAAERAEQLAAQHERRADEQQELLDAPLSP 1120 Query: 1549 DDGNGLRGFSGEGRVKGSGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIA 1608 + + + E Q I + S V+R+A Sbjct: 1121 GGAFAAEAYELLTQAGAWTETARQEAARRAAAERHAHSVRQSLEPIEQSARKSRFVLRLA 1180 Query: 1609 GEGRPWNPGAITGGRVWGDIPDNSVQPGAGNGEPVTAEVLAQRQ----------AEEAIR 1658 G R R + + A E + AE A+ Sbjct: 1181 GTSRKETLKITARYRREHAAAVDEARRAARACAQALREGWRTLKGYRHVSLLGPAEAAVP 1240 Query: 1659 RETERRADEIVRKMAENKPDLPDGKTEQAVREIAGQERDRAAITEREAALPE--GVLREP 1716 AD + M P L G + +I AA + R+ Sbjct: 1241 PVDVEAADLALETMRRRVPALSAGLDTRIGEDIQQLRDMAAAQRATASHHRTVAAATRDE 1300 Query: 1717 QRVREAVREIARENLLQERLQQME 1740 +RE +R A +E ++ Sbjct: 1301 ATLREEMRSAAPAAHAREVTERAA 1324 >UniRef50_B8FB95 Exodeoxyribonuclease V, alpha subunit n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FB95_DESAA Length = 589 Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 83/571 (14%), Positives = 163/571 (28%), Gaps = 107/571 (18%) Query: 926 YGTGLLVSRASYEA---------EKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAA 976 G L YE E S+ ++ + ++R+ L T Q+AA Sbjct: 89 DQAGRLYLHRYYEDQALTAKKILEWSVPDPAYTDQDRLAQELDRLFTPLPNSETDWQKAA 148 Query: 977 TRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA 1036 + +F+V+ G G GKTT ++ + L + P + PT +A + + Sbjct: 149 AATAVL--RKFSVISGGPGTGKTTIAARIIRLLLSLADGRAPSIAITAPTGKAAARLLES 206 Query: 1037 ------------GVD------AQTLASFLHD--TQLQQRSGETPDFSNTLFLLDESSMVG 1076 G++ A+T+ + Q + + ++DE+SMV Sbjct: 207 LGKELSRLGVPPGMEDAIPKRAKTIHRLMGARFNSSQFIHNADNPINADILIVDEASMVE 266 Query: 1077 NTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPEL 1136 + MAR + G + + GD DQL ++ PG + + + Sbjct: 267 LSLMARLLEALPDHG-KLILLGDKDQLASVGPGSVMGDICSGPGSQAFSPEWARVLAKAA 325 Query: 1137 REAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAML 1196 +A+ S N A + VK + + G V + A E+ + + Sbjct: 326 GQAIPS-ENGLAPIADGIVHLVKNYRFAKDSGIGELADCVVRGDAAGAAASLESGGEIIY 384 Query: 1197 KGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGK 1256 + P L E L + Sbjct: 385 EPVNNPRTLPALLEE-----------------------------------------PLRE 403 Query: 1257 EQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNT 1316 + R +++ + I DGLI L++ Sbjct: 404 GFLPFITAKNPAQALEAFGGFRVLCGVRQGPWGMNSANSLVEDIFARDGLILLRNYPW-- 461 Query: 1317 RLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSD 1376 + ++D E + Sbjct: 462 -----------------------YEKRPVVVNRNDAEMNLFNGDHGVYMD-----GKAAF 493 Query: 1377 GQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVAL 1436 E+R D A+A+T H +QG+ + + E + E Y A+ Sbjct: 494 PGLQEELRHYARSMLPAHDTAFAMTVHKSQGSEFESVLLILPGE--NSPVLTRELLYTAV 551 Query: 1437 SRMKQHVQVYTDNRQGWTDAINNAVQKGTAH 1467 +R + +++ A+ + ++ + Sbjct: 552 TRTRSRLRIV-GAMPSIKKAVLSPTRRPSGL 581 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 53/490 (10%), Positives = 118/490 (24%), Gaps = 61/490 (12%) Query: 376 EKGLFTSGIHVLDEL-SVRALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLA 434 E T+ + + +D + Q + T A + + S+ Sbjct: 101 EDQALTAKKILEWSVPDPAYTDQDRLAQELDRLFTPLPNSETDWQKAAAATAVLRKFSVI 160 Query: 435 IVSGQGGAAGQRER----VAELVMMAREQGREVQIIAADRRSQMNMKQDERLS------- 483 G G+ + L+ +A + + I A ++ + + Sbjct: 161 S---GGPGTGKTTIAARIIRLLLSLADGRAPSIAITAPTGKAAARLLESLGKELSRLGVP 217 Query: 484 ----------GELITGRRQ--------LLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGA 525 + I + +IVD+ + L LL+ Sbjct: 218 PGMEDAIPKRAKTIHRLMGARFNSSQFIHNADNPINADILIVDEASMVELSLMARLLEAL 277 Query: 526 ARHNVQVLITDSGQR--TGTGSALMAMKDA--------GVNTYRWQGGEQRPATIISEPD 575 H +L+ D Q G GS + + + Q + Sbjct: 278 PDHGKLILLGDKDQLASVGPGSVMGDICSGPGSQAFSPEWARVLAKAAGQAIPSENGLAP 337 Query: 576 RNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALS 635 L ++ + +G +A + A + L++ G + V Sbjct: 338 IADGIVHLVKNYRFAKDSGIGELADCVVRGDAAG----AAASLESGGEIIYEPVNNPRTL 393 Query: 636 PVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRI 695 P L+ R + + NP + ++ Sbjct: 394 PALLEEPLREGFLPF-----ITAKNPAQALEAFGGFRVLCGVRQGPWGMNSANSLVE--- 445 Query: 696 SSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEP 755 + + L P + + V + + GD D + E Sbjct: 446 -DIFARDGLILLRNYPWYEKRPVVVNRNDAEMNLFNGDHGVYM----DGKAAFPGLQEEL 500 Query: 756 ATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNA-TLNGLARSGRDVRL 814 S P ++ G + + + R+ +R+ Sbjct: 501 RHYARSMLPAHDTAFAMTVHKSQGSEFESVLLILPGENSPVLTRELLYTAVTRTRSRLRI 560 Query: 815 YSSLDETRTA 824 ++ + A Sbjct: 561 VGAMPSIKKA 570 >UniRef50_UPI0001AEC2FF exodeoxyribonuclease V, alpha subunit n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC2FF Length = 735 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 87/641 (13%), Positives = 174/641 (27%), Gaps = 93/641 (14%) Query: 889 TEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHIL 948 +A + T L + + + + + V Y G L SR YE E+ + R+++ Sbjct: 109 EKAPKAGVDVPQLTPLLRIVKSALSNEQVAQLFV---YSNGKLYSRRYYEFEQEVARNVV 165 Query: 949 EGKEAVMPLMERVPGELMEKLT----------SGQRAATRMILETSDRFTVVQGYAGVGK 998 + E Q+ A L RF V+ G G GK Sbjct: 166 KRAALTPLSDEASEKVKQLWPAIFPTETTDRQDWQQIAVAKSLM--QRFCVINGGPGTGK 223 Query: 999 TTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGV-------------------- 1038 T ++ A+ E+ ++V PT +A M + + Sbjct: 224 TYTVLRLLLALQACDEN--LKIVLAAPTGKAQQRMTESIMNSIDGLRGKLDDAVLNNVPT 281 Query: 1039 DAQTLASFLHDTQLQ--QRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVA 1096 DA TL L + + + + + ++DE+SMV M R R Sbjct: 282 DAVTLHRLLGLREHGVSTKFNQHNQLAADVLIVDEASMVDLALMTRIVR-ALPDHARLYF 340 Query: 1097 SGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLE 1156 GD DQL A+ G + AA + T L + V + Sbjct: 341 IGDADQLPAVELGNVLEQLVSTEAASFDENANVPNGTNSLNSNDNAFSLGGVPSLMRQHI 400 Query: 1157 SVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDY 1216 + +P + V Q K A+ ++ + + + Sbjct: 401 ATLCPHLPLLPVDEQAKSYVATLQAPQRFKGQVAKVATAIQRGDASGALAAITDKASDND 460 Query: 1217 TGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRR 1276 + + +V+ L S +H ++ + + + + Sbjct: 461 ETAGLNSNIDSTLVSKT---ASRLQSGVH--LWPEHQVSGRDLHQLAKES-FLPIFDAGS 514 Query: 1277 LSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDT 1336 + + + V G+ + L+ Sbjct: 515 AEEALNRLNVVRWLTPVRKGGMGVEGLNNLV-----------------FDAIKHKIRKRE 557 Query: 1337 IRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQ----------------- 1379 G + K+ + V + S + Q Sbjct: 558 GHFYQGQPIMIVKNHHPQRLSNGEVGVIWPDSKGKLYAWFYQDSQASGQNGSSQKASANA 617 Query: 1380 ----------TREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRK--LMA 1427 + +R + YA+T H +QG+ + + + K + Sbjct: 618 GDSADKTLAQKQALRSISLSRVPQFETVYAMTIHKSQGSEFNQVVLILPKPDSEKAANLF 677 Query: 1428 GFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHD 1468 Y L+R K + +D ++ + ++ + Sbjct: 678 HRGLVYTGLTRAKDGCLIISDT-ATFSHMVQRVDKRYSGMS 717 Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 74/675 (10%), Positives = 165/675 (24%), Gaps = 123/675 (18%) Query: 270 PEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSE 329 + E + + L+ + ++ Q+AV A + Sbjct: 32 IDELEQEEQFIWAGILAYLSYMQRNGHSCIYLKDIAGTTLFKEVVAEQEAVLAAETNVHS 91 Query: 330 RKVQF-----TYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPL-DREKGLFTSG 383 + + + A+S EQ+ L G S Sbjct: 92 NNGAVGASKSPVEQTEQEKAPKAGVDVPQLTPLLRIVKSALSNEQVAQLFVYSNGKLYSR 151 Query: 384 IHVLDELSVRALSRDIMKQNRVTVHPEK----------SVPRTAGYSDAVSVLAQDRPSL 433 + E V ++ + T +A+ Sbjct: 152 RYYEFEQEVARNVVKRAALTPLSDEASEKVKQLWPAIFPTETTDRQDWQQIAVAKSLMQR 211 Query: 434 AIVSGQGGAAGQRERVAELVMMARE--QGREVQIIAADRRSQMNMKQDER---------- 481 V G G+ V L++ + + ++ + A ++Q M + Sbjct: 212 FCVINGGPGTGKTYTVLRLLLALQACDENLKIVLAAPTGKAQQRMTESIMNSIDGLRGKL 271 Query: 482 ---------LSGELITGRRQLLEGM--------AFTPGSTVIVDQGEKLSLKETLTLLDG 524 + L E +IVD+ + L ++ Sbjct: 272 DDAVLNNVPTDAVTLHRLLGLREHGVSTKFNQHNQLAADVLIVDEASMVDLALMTRIVRA 331 Query: 525 AARHNVQVLITDSGQRTGT--GSALMAMKD----------------------------AG 554 H I D+ Q G+ L + G Sbjct: 332 LPDHARLYFIGDADQLPAVELGNVLEQLVSTEAASFDENANVPNGTNSLNSNDNAFSLGG 391 Query: 555 VNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQ------- 607 V + Q + P + +A + + + VA+V+ ++ Sbjct: 392 VPSLMRQHIATLCPHLPLLPVDEQAKSYVAT--LQAPQRFKGQVAKVATAIQRGDASGAL 449 Query: 608 AILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSH- 666 A +T +T G+ + T+ + + L S + G + Q E+ Sbjct: 450 AAITDKASDNDETAGLNSNIDSTLVSKTASRLQSGVHLWPEHQVSGRDLHQLAKESFLPI 509 Query: 667 -DRYVIDRVTAQSHSLTLRD--AQGETQVVRISSL--DSSWSLFRPEKMPVADGERLRVT 721 D + + + + +G V +++L D+ R + G+ + + Sbjct: 510 FDAGSAEEALNRLNVVRWLTPVRKGGMGVEGLNNLVFDAIKHKIRKREGHFYQGQPIMIV 569 Query: 722 GKIPGLRVSGGDRLQVA----------------------------SVSEDAMTVVVPGRA 753 R+S G+ + + + D+ + + Sbjct: 570 KNHHPQRLSNGEVGVIWPDSKGKLYAWFYQDSQASGQNGSSQKASANAGDSADKTLAQKQ 629 Query: 754 EPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNAT-----LNGLARS 808 ++ +S P ++ G + + N GL R+ Sbjct: 630 ALRSISLSRVPQFETVYAMTIHKSQGSEFNQVVLILPKPDSEKAANLFHRGLVYTGLTRA 689 Query: 809 GRDVRLYSSLDETRT 823 + S Sbjct: 690 KDGCLIISDTATFSH 704 >UniRef50_A3WKH6 ATP-dependent exoDNAse (Exonuclease V), alpha subunit, superfamily I helicase n=1 Tax=Idiomarina baltica OS145 RepID=A3WKH6_9GAMM Length = 633 Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats. Identities = 70/586 (11%), Positives = 160/586 (27%), Gaps = 97/586 (16%) Query: 914 RGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLT--- 970 D + + K L R + E +++ + + + + ++ L Sbjct: 109 NSDSSPLVLNKSSDGERLYLRRYWYCEHYNSQNLEMRMDNTLEVNDDQLNMTLDALFGDT 168 Query: 971 ----SGQRAATRMILETSDRFTVVQGYAGVGKTTQF---RAVMSAVNMLPESERPRVVGL 1023 QR A + F+V+ G G GKT V+ R+ Sbjct: 169 SKQLDWQRMACANAARS--AFSVITGGPGTGKTYTVVRLLVVLQQQFQQAHGRPLRIKLA 226 Query: 1024 GPTHRAVGEMRSA-----------------------GVDAQTLASFLH--DTQLQQRSGE 1058 PT +A + + ++A T+ L + R E Sbjct: 227 APTGKAAARLSESINEALSELQTKLPETLQPLLATIQIEASTVHKLLGVIANSRRYRHHE 286 Query: 1059 TPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTR 1118 L ++DE+SM+ M + V GD DQL ++ G Sbjct: 287 KNPVRADLIVIDEASMLDIEMMTALLQ-ATPTQAQLVLLGDKDQLASVEAGAVLGNLCEG 345 Query: 1119 SAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTE 1178 + + + SL + +R L + P++ Sbjct: 346 A-----------EKGGYWSSTINSLASTHAQR--DALIQYQDEAGPKRLQHVVMLRQTRR 392 Query: 1179 FSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRR 1238 F + + E F P++ Y++ + + + ++ ++ Sbjct: 393 FEQAIADVANSINDQNTRAIEHFFSAPVSEYDSNIVTWLMLEHDRQDSFDLL-------- 444 Query: 1239 VLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIA 1298 + + + + L+ ++ + Sbjct: 445 -IKQGFSHYLRALEQWREAPAEQRDTAAVLDAYATFQLLTGLRNGPWGAHALNRYVADVL 503 Query: 1299 GISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVA 1358 G+ D G + TK+D Sbjct: 504 GVEADR----------------------------------WYEGRPVMVTKNDYGLRLNN 529 Query: 1359 NSVW-TVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALE 1417 + T + ++ +++ H++ Y +T H +QG+ A + Sbjct: 530 GDIGVTFRMPETGRLRVAFFDSHGKVKWVLPSRLNHVETVYVMTVHKSQGSEF--AHTVL 587 Query: 1418 GTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQK 1463 T + + E Y ++R K+ + + + + +A++ + + Sbjct: 588 VTPQHDSPVLTKELLYTGVTRAKKKLTLVVSKKSVFLNAVSKRINR 633 Score = 127 bits (318), Expect = 4e-27, Method: Composition-based stats. Identities = 54/529 (10%), Positives = 123/529 (23%), Gaps = 71/529 (13%) Query: 366 SREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTA-------- 417 S ++ + + E M + ++ A Sbjct: 112 SSPLVLNKSSDGERLYLRRYWYCEHYNSQNLEMRMDNTLEVNDDQLNMTLDALFGDTSKQ 171 Query: 418 --GYSDAVSVLAQDRPSLAIVSGQGGAAGQRERV-------AELVMMAREQGREVQIIAA 468 A + A+ S+ G G+ V + A + +++ A Sbjct: 172 LDWQRMACANAARSAFSVIT---GGPGTGKTYTVVRLLVVLQQQFQQAHGRPLRIKLAAP 228 Query: 469 DRRSQMNMKQDER----------------------LSGELITGRR--------QLLEGMA 498 ++ + + + + Sbjct: 229 TGKAAARLSESINEALSELQTKLPETLQPLLATIQIEASTVHKLLGVIANSRRYRHHEKN 288 Query: 499 FTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTG---TGSALMAMKDAGV 555 +++D+ L ++ LL A Q+++ + G+ L + + Sbjct: 289 PVRADLIVIDEASMLDIEMMTALLQ-ATPTQAQLVLLGDKDQLASVEAGAVLGNLCEGAE 347 Query: 556 NTYRWQGGEQRPATIISEPDRNVRYARLAG-----DFAASVKAGEESVAQVSGVREQAIL 610 W A+ ++ D ++Y AG + A Sbjct: 348 KGGYWSSTINSLASTHAQRDALIQYQDEAGPKRLQHVVMLRQTRRFEQAIADVANSINDQ 407 Query: 611 TQAIRSELKTQGVLGLPE-----VTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRS 665 + V + + D + Y + + Sbjct: 408 NTRAIEHFFSAPVSEYDSNIVTWLMLEHDRQDSFDLLIKQGFSHYLRA-LEQWREAPAEQ 466 Query: 666 HDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIP 725 D + A LT G ++ + ++ +G + VT Sbjct: 467 RDTAAVLDAYATFQLLTGL-RNGPWGAHALNRYVADVLGVEADR--WYEGRPVMVTKNDY 523 Query: 726 GLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDS 785 GLR++ GD + E V + V S ++ + Sbjct: 524 GLRLNNGDIGVTFRMPETGRLRVAFFDSHGKVKWVLPSRLNHVETVYVMTVHKSQGSEFA 583 Query: 786 ATVFAS---VTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHP 831 TV + + + G+ R+ + + L S R Sbjct: 584 HTVLVTPQHDSPVLTKELLYTGVTRAKKKLTLVVSKKSVFLNAVSKRIN 632 >UniRef50_B5YII1 Putative uncharacterized protein n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YII1_THEYD Length = 1843 Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats. Identities = 86/533 (16%), Positives = 187/533 (35%), Gaps = 60/533 (11%) Query: 118 EALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ-HNGEWKTLS 176 E R +G++ + + N + + H R +PQ+H H N T+ NG+WK ++ Sbjct: 8 EGYIQYRETVNGETISKSSDNATVLVNTHLCGR-LDPQIHNHISFFNFTRTENGDWKAIN 66 Query: 177 SDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVG----KHGMWEMPGVPVE 232 SD +Y+N+ F +L Q++ G TE+V K + ++ G+ E Sbjct: 67 SD---------AIYSNKYMFEAYLENQLAYQLKQQGINTELVKEGNSKEYVTKIAGLNEE 117 Query: 233 AFSG--RSQT-IREAVGED-----------ASLKSRDVAALDTRKSKQHVDPEIKMAEWM 278 + G R+ I + + + + R+ A L+ R+SKQ + Sbjct: 118 HWKGIARTSELIDKYLEQHKEELLQKYPNATESQLREYAYLEIRQSKQSKTIGELFKQVE 177 Query: 279 QTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTD 338 +LKE G + ++ + T A+++ ++ + +AI + +R F+ +D Sbjct: 178 DSLKEQGLTQQDIIKLVSEKRENLTQELNQANKEEL-AKEIINKAIDEVIDRNSTFSQSD 236 Query: 339 VLARTVGILPPENGVIERARAGID-EAISREQLIPLDREKG--------LFTSGIHVLDE 389 + I +A + E + + + FTS + E Sbjct: 237 LFKAAFQISAGRVDSDTLVQAVKENERLIEMGYVQDKQHNRANATYQEKYFTSQEVIAWE 296 Query: 390 LSVRALSRDIMKQNRVTVHPE-KSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRER 448 ++ + ++ T +A++ + Q V G G Sbjct: 297 HNILKSIEEGKGSVEKITEQRYENEKLTKSQLEAINHILQSTDRYTAVVGWAGVGKTTFV 356 Query: 449 ------VAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMA-FTP 501 + ++ +A+E G + ++ + +K+ + + + Sbjct: 357 GEMSKELGKINEIAKEAGYRLIGVSNTNTAVNELKE-VGIEAMTTAKFLNSAKALQSLDS 415 Query: 502 GSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTG---TGSALMAMKDAG---- 554 + +IVD+ LS K+ T+LD +++ ++ GS A+ Sbjct: 416 KTILIVDEASFLSTKDMSTILDKTRESGCRIVFIGDDRQLPGVQAGSPFAALIRENKINH 475 Query: 555 --VNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVR 605 + Q E+ + + +N+ A F +S +++ Sbjct: 476 VKMTDIVRQRNEELKSAVYDIYHKNIESALNKITFKTI---ERDSALEIATHA 525 Score = 216 bits (548), Expect = 8e-54, Method: Composition-based stats. Identities = 87/302 (28%), Positives = 141/302 (46%), Gaps = 17/302 (5%) Query: 864 AQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVA 923 A++ I+ A+ V + FS DL A +A L + + ++ YV Sbjct: 214 AKEIINKAIDEVIDRNSTFSQSDLFKAAFQISAGRVDSDTLVQAVKENERLIEMGYVQDK 273 Query: 924 KG------YGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAAT 977 + Y S+ E +IL+ I EGK +V + E+ EKLT Q A Sbjct: 274 QHNRANATYQEKYFTSQEVIAWEHNILKSIEEGKGSVEKITEQRYEN--EKLTKSQLEAI 331 Query: 978 RMILETSDRFTVVQGYAGVGKTTQFRAV---MSAVNMLPESERPRVVGLGPTHRAVGEMR 1034 IL+++DR+T V G+AGVGKTT + + +N + + R++G+ T+ AV E++ Sbjct: 332 NHILQSTDRYTAVVGWAGVGKTTFVGEMSKELGKINEIAKEAGYRLIGVSNTNTAVNELK 391 Query: 1035 SAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRA 1094 G++A T A FL+ S T+ ++DE+S + DM+ G R Sbjct: 392 EVGIEAMTTAKFLNS-----AKALQSLDSKTILIVDEASFLSTKDMSTILDKTRESGCRI 446 Query: 1095 VASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQT-PELREAVYSLINRDVERALS 1153 V GD QL + G PF + + M +IVRQ EL+ AVY + ++++E AL+ Sbjct: 447 VFIGDDRQLPGVQAGSPFAALIRENKINHVKMTDIVRQRNEELKSAVYDIYHKNIESALN 506 Query: 1154 GL 1155 + Sbjct: 507 KI 508 Score = 89.3 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 47/273 (17%), Positives = 111/273 (40%), Gaps = 28/273 (10%) Query: 1209 YEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTAN 1268 I ++Y + + + I N+D ++LNS+I + G + + V V N Sbjct: 670 LREIAKEYIS---QGYKNSAISVATNQDAKILNSLISEELRNGELKGAKSIEVNVWVNKN 726 Query: 1269 IRDGELRRLSTWETHRDALVLVDNV--------YHRIAGISKDDGLITLQDAEGNTRLIS 1320 + + E + S++ LV+ + + I K+ + +G + Sbjct: 727 LDNVERLKASSYNVGDKLLVMSSGGGVSVGKELFVKEVDIVKNTLKVEYTTKKGEVKERV 786 Query: 1321 PR-EAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLS---- 1375 E + + V + ++I++ G+++ F + R + + + V +++ + +++ Sbjct: 787 FNIEKLGDKVQAFQNESIQIAEGEKLIFNNTYRNKNFANSEFAYVKSINNEDGSITIVSK 846 Query: 1376 -DGQQTREIRPGQEQAEQ--HIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESA 1432 D + + +E+ Q H YA+TA QG + IA +E+ Sbjct: 847 LDSDKAKTTTFTKEELAQGVHFQHGYAVTADHMQGKTTQNVIAF--------ETRNYENF 898 Query: 1433 YVALSRMKQHVQVY-TDNRQGWTDAINNAVQKG 1464 V+++R KQ+ +Y T +++ + + + K Sbjct: 899 LVSITRAKQNATIYSTMSKERFIEKASEEATKE 931 >UniRef50_A5WER9 Exodeoxyribonuclease V, alpha subunit n=3 Tax=Psychrobacter RepID=A5WER9_PSYWF Length = 787 Score = 247 bits (629), Expect = 4e-63, Method: Composition-based stats. Identities = 70/576 (12%), Positives = 173/576 (30%), Gaps = 92/576 (15%) Query: 931 LVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVV 990 +++AE ++ + I + + ++ + + + L + Q A + + + F+++ Sbjct: 266 FWLHRTWQAEFNLAKTI---QNILNQPIKPLDIHIPDNLNAQQVQAVK--VANENAFSII 320 Query: 991 QGYAGVGKTTQFRAVMSAVNMLPESERPR-----------------VVGLGPTHRAVGEM 1033 G G GKT ++ A+ + + + PT +A M Sbjct: 321 TGGPGTGKTYTVAQLVIALQQAQANSDAQQALGEGSTIRFSTDSAGLALSAPTGKAAQRM 380 Query: 1034 RSAGV-------------DAQTLASFLH-DTQLQQRSGETPDFSNTLFLLDESSMVGNTD 1079 + + +A+T+ L + R + ++DE+SM+G Sbjct: 381 QESLQAALDNAQVEVQLQEAKTIHRLLGIGRDGRPRYHAGNPLGEDIIIVDEASMLGVEL 440 Query: 1080 MARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAAD--VAIMKEIVRQTPELR 1137 + I G R + GD +QL A+ G A + E R + Sbjct: 441 ANYLVSAIKP-GARLILLGDANQLAAVDAGAVLADLCRIDVLQPIHAQLTESRRFHADSG 499 Query: 1138 EAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLK 1197 + + + + E ++ S + + + + + Sbjct: 500 IGKLATQINTTPTDMQQV----WQLLTHDEALQFQSVNIQLGSDATDREADDVETAVFNH 555 Query: 1198 GEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKE 1257 + + ++Y + IH + + Sbjct: 556 QLINSLSNKKIISKLSQNYL---------------------PYLNKIHQLIK-HPIAKSV 593 Query: 1258 QVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTR 1317 V + + + R+ T + + N Y +++ + Sbjct: 594 PEAVSLTVSELMSKFNRFRILTAGHNGEWGDHNINDYLTRWHMTQLKLPLGK-------- 645 Query: 1318 LISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDG 1377 SP + L + + GD ++ ++ + + + Sbjct: 646 --SPWFHGRPVMVLQNNYELGLFNGDIGICLQTQQK-----GEGGRLEVFFENKI----- 693 Query: 1378 QQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALS 1437 + ++ I AYA+T H +QG+ + + + E Y A++ Sbjct: 694 ----QGIAVNLLNDELIATAYAMTIHKSQGSEFDHVAV--TFDNSNSRLLSKELIYTAVT 747 Query: 1438 RMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPK 1473 R K+ V +++ ++ A+ Q+ T + + Sbjct: 748 RAKKKVSIFST-KRALQKAVQTPTQRYTGLALQFEQ 782 Score = 160 bits (405), Expect = 4e-37, Method: Composition-based stats. Identities = 62/542 (11%), Positives = 147/542 (27%), Gaps = 91/542 (16%) Query: 373 LDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPS 432 +K F E ++ ++I+ Q + A AV V + + Sbjct: 259 ETDKKITFWLHRTWQAEFNLAKTIQNILNQPIKPLDIHIPDNLNAQQVQAVKVA--NENA 316 Query: 433 LAIVSGQGGAAGQRERVAELVMMAREQ------------GREVQ---------IIAADRR 471 +I++G G G+ VA+LV+ ++ G ++ + A + Sbjct: 317 FSIITGGPG-TGKTYTVAQLVIALQQAQANSDAQQALGEGSTIRFSTDSAGLALSAPTGK 375 Query: 472 SQMNMKQDERL------------SGELITGRRQLLEGMAFTPG-------STVIVDQGEK 512 + M++ + + I + +IVD+ Sbjct: 376 AAQRMQESLQAALDNAQVEVQLQEAKTIHRLLGIGRDGRPRYHAGNPLGEDIIIVDEASM 435 Query: 513 LSLKETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMKD----AGVNTYRWQGGEQRPA 568 L ++ L+ ++++ + A + D + Q E R Sbjct: 436 LGVELANYLVSAIKP-GARLILLGDANQLAAVDAGAVLADLCRIDVLQPIHAQLTESRRF 494 Query: 569 TIIS------------EPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRS 616 S D + L D A ++ + + RE + A+ Sbjct: 495 HADSGIGKLATQINTTPTDMQQVWQLLTHDEALQFQSVNIQLGSDATDREADDVETAV-- 552 Query: 617 ELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRP------GMVMEQWNPETRSHDRYV 670 ++ + L Y P ++ Sbjct: 553 ------------FNHQLINSLSNKKIISKLSQNYLPYLNKIHQLIKHPIAKSVPEAVSLT 600 Query: 671 IDRVTAQSHSLTLRD--AQGETQVVRISSLDSSWSLFR----PEKMPVADGERLRVTGKI 724 + + ++ + + GE I+ + W + + K P G + V Sbjct: 601 VSELMSKFNRFRILTAGHNGEWGDHNINDYLTRWHMTQLKLPLGKSPWFHGRPVMVLQNN 660 Query: 725 PGLRVSGGDRLQVASVSEDA----MTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGH 780 L + GD + + V + + + + + A ++ G Sbjct: 661 YELGLFNGDIGICLQTQQKGEGGRLEVFFENKIQGIAVNLLNDELIATAYAMTIHKSQGS 720 Query: 781 SVSDSATVFASVTQMAMDNAT-LNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQ 839 A F + + + R+ + V ++S+ + A + + + Sbjct: 721 EFDHVAVTFDNSNSRLLSKELIYTAVTRAKKKVSIFSTKRALQKAVQTPTQRYTGLALQF 780 Query: 840 IK 841 + Sbjct: 781 EQ 782 >UniRef50_C3CUT3 Helicase, RecD/TraA n=1 Tax=Bacillus thuringiensis Bt407 RepID=C3CUT3_BACTU Length = 871 Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats. Identities = 102/803 (12%), Positives = 217/803 (27%), Gaps = 111/803 (13%) Query: 718 LRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALK-------- 769 +R + GL+ D V M + P + A K Sbjct: 117 VRYLRTLKGLKNRAEDIYSVFGDKSIDMLIENPEEVVSRIKGIGKKSVEAWKKQLESLTN 176 Query: 770 --LENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKL 827 ++ G S S ++++ + + N + + Y + A+ + Sbjct: 177 SQYTLSYLLDIGLSFEQSKSLYSEYKDDIIRLISENPYLLAR-KIPGYGFKKCDKIAKDI 235 Query: 828 ARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDL 887 ++ + + + + I SK+ + + Sbjct: 236 HFDMLSDERIQEGIIHGLDEATKEGHCFLHKDDLIEKTREILRVTL--PSKESERLLKET 293 Query: 888 LTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGY--------------------- 926 + E S+ E+NA +R K Sbjct: 294 IDEKISYYFGTIQVMIPRDELNAYYERWKSARYKNEKEKCLYPLFDIPYELIEEEIENLL 353 Query: 927 -------GTGLLVSRASYEAEKSILRHILEGKEAVMPL--------MERVPGELMEKLTS 971 + + AE + + + +++ +L Sbjct: 354 TFERIVIEQDRVYLEYIHSAEVRVAEELYRLSDTQEWKNQIDIKAELDKYLSAEGIELEE 413 Query: 972 GQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPR--VVGLGPTHRA 1029 Q A + F V+ G AG GKT + ++ N++ +S + L PT +A Sbjct: 414 KQEEAILTFTKRRGGFYVLNGSAGCGKTFVLKIILKIFNIVCKSNGITPYLQLLAPTGKA 473 Query: 1030 VGEMRSAGVD-AQTLASFLH-DTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALI 1087 + + + T+ L + + +LDESS + I Sbjct: 474 AKVAKKSTNEICLTVHRGLEFRGGEGFTFNASNPLPGNIIVLDESSFLDVELSKDLLQAI 533 Query: 1088 AAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRD 1147 G + GD QL +I PG + V + + RQ + A + D Sbjct: 534 KR-GATVIWMGDIKQLPSIGPGSVLKDIIESGVLPVVTLDVVKRQGKQSGIAKNAKKIID 592 Query: 1148 VERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMT 1207 E + ++ V R ++ + Sbjct: 593 GEMIETCEDTKDSYAVFRDSPKVILKNILESVKRVLTFP--------------------- 631 Query: 1208 LYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTA 1267 + + D +P+ ++N ++ + + + V LN Sbjct: 632 --DYTLDDIQVLSPQKTGILGTY--------MINLLMQEAFNE------TESTVTSLNKE 675 Query: 1268 NIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAE 1327 D E R ++ + + +N + ++ +D+ +P + Sbjct: 676 FTVDNE-RFSLYFKEGDKVINMRNND----LKVWYKKSYVSTEDSNVLLTQYTPNKDAKG 730 Query: 1328 GVTLYTPDTIR-VGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPG 1386 G+ I + K + V A + + + + I Sbjct: 731 GIANGETGVIEAIRKIKEPVDNKETIK--------GAVPAKTKEIIRIIVKYDDGYIFYD 782 Query: 1387 QEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVY 1446 ++ + +D AYA + H +QG+ I M Y +R ++ V Sbjct: 783 NKEK-EDLDHAYAFSIHKSQGSQWRACIMPI--SMLHYRMLDNSLFYTGFTRAQEFNVVI 839 Query: 1447 TDNRQGWTDAIN--NAVQKGTAH 1467 + R AI + ++ T Sbjct: 840 GEER-AIKHAIKTYKSRERNTTL 861 Score = 140 bits (353), Expect = 4e-31, Method: Composition-based stats. Identities = 62/504 (12%), Positives = 162/504 (32%), Gaps = 55/504 (10%) Query: 379 LFTSGIHVLDELSVRALSRDIMKQNRVTVHPE-----KSVPRTAGYSDAVSVLAQDRPSL 433 + ++ + V +EL + +++ Q + + + + +A+ + R Sbjct: 370 IHSAEVRVAEELYRLSDTQEWKNQIDIKAELDKYLSAEGIELEEKQEEAILTFTKRRGGF 429 Query: 434 AIVSGQGGAAGQRERVAELVMMA----REQGRE--VQIIAADRRSQMNMKQDERLSGELI 487 +++G G G+ + ++ + + G +Q++A ++ K+ + Sbjct: 430 YVLNGSAGC-GKTFVLKIILKIFNIVCKSNGITPYLQLLAPTGKAAKVAKKSTNEICLTV 488 Query: 488 TGRRQLLEGMAFT-------PGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR 540 + G FT PG+ +++D+ L ++ + LL R + + D Q Sbjct: 489 HRGLEFRGGEGFTFNASNPLPGNIIVLDESSFLDVELSKDLLQAIKRGATVIWMGDIKQL 548 Query: 541 --TGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESV 598 G GS L + ++GV +R + + G+ + + ++S Sbjct: 549 PSIGPGSVLKDIIESGVLPVVTLDVVKRQGKQSGIAKNAKKI--IDGEMIETCEDTKDSY 606 Query: 599 AQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQ 658 A ++ + I +K VL P+ T+ L + + Y ++M++ Sbjct: 607 AVFRDSP--KVILKNILESVKR--VLTFPDYTL--DDIQVLSPQKTGILGTYMINLLMQE 660 Query: 659 WNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERL 718 ET S + T + +L +G+ + ++ W ++ + D L Sbjct: 661 AFNETESTVTSLNKEFTVDNERFSLYFKEGDKVINMRNNDLKVW--YKKSYVSTEDSNVL 718 Query: 719 RVT---GKIPGLRVSGGDRLQVASVS------------------EDAMTVVVPGRAEPAT 757 K ++ G+ + ++ + + + + + Sbjct: 719 LTQYTPNKDAKGGIANGETGVIEAIRKIKEPVDNKETIKGAVPAKTKEIIRIIVKYDDGY 778 Query: 758 LPVSDSPFTALKLENGWVETPGHSVSDSATVFA---SVTQMAMDNATLNGLARSGRDVRL 814 + + L + A + +M ++ G R+ + Sbjct: 779 IFYDNKEKEDLDHAYAFSIHKSQGSQWRACIMPISMLHYRMLDNSLFYTGFTRAQEFNVV 838 Query: 815 YSSLDETRTAEKLARHPSFTVVSE 838 + A K + + Sbjct: 839 IGEERAIKHAIKTYKSRERNTTLK 862 >UniRef50_Q3IJ15 Exonuclease V, alpha chain with recC and recD: 5' and 3' nuclease, ATPase, recombinase, helicase n=3 Tax=Alteromonadales RepID=Q3IJ15_PSEHT Length = 671 Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 77/593 (12%), Positives = 182/593 (30%), Gaps = 88/593 (14%) Query: 906 GEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGEL 965 ++ + ++ + + L E+++ ++ E + + + L Sbjct: 130 EQVLSYLQNHTSVGANKPLQLFNQRLYFARLAGYEQTLASRLITMSERTLNINNELLAAL 189 Query: 966 MEKL--------TSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESER 1017 + + T Q+ A + F+V+ G G GKTT +++ + L ++ Sbjct: 190 LNEYFTPDANIATDWQKVACAIAAT--KGFSVITGGPGTGKTTTVTKLLAILQSLYKTAP 247 Query: 1018 PRVVGLGPTHRAVGEMRS---------AGVD----------AQTLASFLHDTQ--LQQRS 1056 + + PT +A + + AQT+ L + R Sbjct: 248 LSIKLVAPTGKAAARLSESILGAKDKLTNIPADIRTLIPESAQTIHRLLGVKPFTNKFRH 307 Query: 1057 GETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQ 1116 + + ++DE+SMV + MA+ R + GD DQL ++ G Sbjct: 308 NKANPLHLDVLIIDEASMVDLSLMAKLIE-ALPAHARLILLGDKDQLASVDTGSVMSDLC 366 Query: 1117 TRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSV 1176 QTP A +N + L + S + +HS Sbjct: 367 QGLVLG---------QTPGYSPARCDELNNLCFNGEAKLIAQSNSAFKLADCIAFLQHSY 417 Query: 1177 TEFSHSQEAKLAEAQ--QKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLN 1234 + S +LA A + + ++ ++ DY Sbjct: 418 RFDAQSGIGQLALAVNTNNTGVLNYVEQESVEGRFKDVILDY------------------ 459 Query: 1235 EDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVY 1294 + I + + A K + ++ + +++ + + + Y Sbjct: 460 ---DFIAKPIEKLVKSA--ASKYTHYLSLIAQGASVAEVHKAFASY---QLLAAVREGDY 511 Query: 1295 HRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRER 1354 G++ + I + +SP + G+ + +++D + Sbjct: 512 ----GVNSLNQRIERVLQQQGLITLSPNQRHYTGM--------------PIMVSQNDYQL 553 Query: 1355 GYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAI 1414 + + + + R D Y +T H +QG+ ++ Sbjct: 554 KLFNGDIGILMPDESGQLKALFIDEQGNQRAFSPARLPAHDKVYVMTIHKSQGSEFSYTA 613 Query: 1415 ALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAH 1467 + ++ + Y ++R K ++ D ++ A+N +V + + Sbjct: 614 MVLPPLKQARMGINRQLVYTGITRAKNTFELVAD-KKVLLLAMNKSVSRASGL 665 Score = 115 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 54/538 (10%), Positives = 134/538 (24%), Gaps = 71/538 (13%) Query: 350 ENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHP 409 E E+ + + S PL E ++ + + ++ + Sbjct: 125 EGFNYEQVLSYLQNHTSVGANKPLQLFNQRLYFARLAGYEQTLASRLITMSERTLNINNE 184 Query: 410 EKSVPRTA-----------GYSDAVSVLAQDRPSLAIVSGQGGAAGQR-ERVAELVMMAR 457 + A ++ A S+ G + +A L + + Sbjct: 185 LLAALLNEYFTPDANIATDWQKVACAIAATKGFSVITGGPGTGKTTTVTKLLAILQSLYK 244 Query: 458 EQGREVQIIAADRRSQMNMKQD--------ERLSGE----------LITGRRQ------- 492 ++++A ++ + + + + I Sbjct: 245 TAPLSIKLVAPTGKAAARLSESILGAKDKLTNIPADIRTLIPESAQTIHRLLGVKPFTNK 304 Query: 493 -LLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGT--GSALMA 549 +I+D+ + L L++ H +L+ D Q GS + Sbjct: 305 FRHNKANPLHLDVLIIDEASMVDLSLMAKLIEALPAHARLILLGDKDQLASVDTGSVMSD 364 Query: 550 MKDAGVNTYRWQGGEQRPATIISEPDR---------------NVRYARLAGDFAASVKAG 594 + V R + + A L + ++G Sbjct: 365 LCQGLVLGQTPGYSPARCDELNNLCFNGEAKLIAQSNSAFKLADCIAFLQHSYRFDAQSG 424 Query: 595 EESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMY---- 650 +A +L + ++ + + + A L + Y Sbjct: 425 IGQLALAVNTNNTGVLNYVEQESVEGRFKDVILDYDFIAKPIEKLVKSAASKYTHYLSLI 484 Query: 651 RPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKM 710 G + + + S ++ V + + + + E + + P + Sbjct: 485 AQGASVAEVHKAFAS--YQLLAAVREGDYGVNSLNQRIERVLQQ-----QGLITLSPNQR 537 Query: 711 PVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVV-PGRAEPATLPVSDSPFTALK 769 G + V+ L++ GD + + + + + P Sbjct: 538 HY-TGMPIMVSQNDYQLKLFNGDIGILMPDESGQLKALFIDEQGNQRAFSPARLPAHDKV 596 Query: 770 LENGWVETPGHSVSDSATVFASVTQM---AMDNATLNGLARSGRDVRLYSSLDETRTA 824 ++ G S +A V + Q G+ R+ L + A Sbjct: 597 YVMTIHKSQGSEFSYTAMVLPPLKQARMGINRQLVYTGITRAKNTFELVADKKVLLLA 654 >UniRef50_UPI000050FF73 TrwC relaxase n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050FF73 Length = 1152 Score = 244 bits (621), Expect = 3e-62, Method: Composition-based stats. Identities = 126/906 (13%), Positives = 249/906 (27%), Gaps = 130/906 (14%) Query: 4 IAQVRSAGSAGNYYTD-----KDNYYVLGSMG------ERWAGRGAEQLGLQGSVDKDVF 52 + R G+A Y + D+YY+ G G GL D + + Sbjct: 8 VTLFRGPGTAARRYLESDRSTADDYYLEGGTALADFTITNSRGEVVANTGL----DPEQY 63 Query: 53 TRLLEGRLPDGADLSRMQDGSNRHRPGY----DLTFSAPKSVSMMAMLGGD--KRLIDAH 106 ++ P + + + R G ++ + PKS+S+ A L + L A Sbjct: 64 AGWVDWTHPLTGEQMGIPREAGEIRKGSPRFAEMVVNTPKSLSIAAALHPEVSDALDAAQ 123 Query: 107 NQAVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVT 166 AV R + A TRV GQ E + ++ H TSR +P H H + Sbjct: 124 QDAVAEIRRWLAQHAYTRVGPRGQQEIIPAESVQTVAVVHRTSRAGDPHRHVHFQIGTRV 183 Query: 167 QHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEM 226 G+W+ L + + K + +L ++ G + V + E+ Sbjct: 184 PAAGKWRALDTAVLFKQQGAIRALGAAVIAA---NPQLAATLDRHGLTLDSV-TGEVTEL 239 Query: 227 PGVPVEAFSGRSQTIREAVG------EDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQT 280 S R+ + + E A + R + E + Sbjct: 240 EAFNP-VMSKRAHQVERNLKRLEAEWEAAHPGEEAGPVVRARLLHKAWAHERPNKKPSDL 298 Query: 281 LKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVL 340 E + + + R P S D VQ+ +A+ + +T + Sbjct: 299 GDEDAWKQELVEAGYEPKTLTRAPAPERVSVDDLSVQEVANRALDRSAAGGSTWTVHTIR 358 Query: 341 ARTVGILPPENG------VIERARAGIDEAISR-----EQLIPLDREKGLFTSGIHVLDE 389 I + E + D AI TS V E Sbjct: 359 EHVTRITTDHGVQATPAELREFVQLATDLAIGDCFSVLPPGAVHPEHVAHLTSLRVVEAE 418 Query: 390 LSVRALSRDIMKQNRVTVHPEKSVPRTAGY---SDAVSVLAQDRPSLAIVSGQGGAAGQR 446 +R + G + R L +V G G +G+ Sbjct: 419 TQLRDRLEAQAPNREPPRPDLTELAAEHGLDAGQAEAAAAVASRDPLVVVEGAAG-SGKT 477 Query: 447 ERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQL------------- 493 +A + GR V+++ +++ + ++ + + Sbjct: 478 TMLATAIEALDHDGRSVRVVTPTKKAAQVAAETLKVPADSVAALVYAHGFRWNDDGVWTR 537 Query: 494 -----------------LEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITD 536 +G G VIVD+ L L LL V + Sbjct: 538 LNPGDADPATGQTYTGPRKGARLVRGERVIVDEAGMLDQDTALALLTIIREAKASVALVG 597 Query: 537 SGQRTGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEE 596 + + D+ D + + + Sbjct: 598 DRAQLPAVGRGGVL------------------------DKAAHIRGATVDMSELHRFAND 633 Query: 597 SVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVM 656 A ++ AI L+ G++ ++ M Sbjct: 634 QYAALTLRMRDGRNPAAIFDVLQAMGLV-----------------------RLHADDDAM 670 Query: 657 EQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGE 716 + + + V ++ T + + T + +D++ ++ + + + G+ Sbjct: 671 REHIAQNTIPEDAVTVATNDEA---TALNERIRTVRIEAGEVDNARTVTGSDGLAIGVGD 727 Query: 717 RLRVTGKIPGLRVSGGDRLQVASVSEDA-MTVVVPGRAEPATLPVSDSP-FTALKLENGW 774 ++ LRV+ V +SED + + G + V+ P + A + + Sbjct: 728 LVQARQNDAELRVANRQTFTVQQISEDGTVHAIETGTDRKHNVTVTLPPGYVAEHVHLAY 787 Query: 775 VETPGHSVSDSAT-VFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSF 833 T + ++ A GL R L+ + A Sbjct: 788 AATAYGVQGITVDSAHTVLSDALDAAAVYVGLTRGSGRNELHVIAADLAEARGQFVEAMG 847 Query: 834 TVVSEQ 839 +++ Sbjct: 848 RDRADR 853 Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 102/959 (10%), Positives = 218/959 (22%), Gaps = 76/959 (7%) Query: 752 RAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRD 811 TL T L+ N + H V + + + A + R+ Sbjct: 223 DRHGLTLDSVTGEVTELEAFNPVMSKRAHQVERNLKRLEAEWEAAHPGEEAGPVVRARLL 282 Query: 812 VRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLA 871 + ++ + L ++ + + A Q+ + A Sbjct: 283 HKAWAHERPNKKPSDLGDEDAWKQELVEAGYEPKTLTRAPAPERVSVD-DLSVQEVANRA 341 Query: 872 LPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVD--------VA 923 L + +++ + + DL D Sbjct: 342 LDRSAAGGSTWTVHTIREHVTRITTDHGVQATPAELREFVQLATDLAIGDCFSVLPPGAV 401 Query: 924 KGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILET 983 L S EAE + + P + E +A + + Sbjct: 402 HPEHVAHLTSLRVVEAETQLRDRLEAQAPNREPPRPDLTELAAEHGLDAGQAEAAAAVAS 461 Query: 984 SDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAG-VDAQT 1042 D VV+G AG GKTT + A+ + + V + PT +A V A + Sbjct: 462 RDPLVVVEGAAGSGKTTMLATAIEAL----DHDGRSVRVVTPTKKAAQVAAETLKVPADS 517 Query: 1043 LASFLHDTQLQQRSGE------------------------TPDFSNTLFLLDESSMVGNT 1078 +A+ ++ + ++DE+ M+ Sbjct: 518 VAALVYAHGFRWNDDGVWTRLNPGDADPATGQTYTGPRKGARLVRGERVIVDEAGMLDQD 577 Query: 1079 DMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELRE 1138 +I GD QL A+ G + M E+ R + Sbjct: 578 TALALLTIIREAKASVALVGDRAQLPAVGRGGVL-DKAAHIRGATVDMSELHRFANDQYA 636 Query: 1139 AVYSLIN--RDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAML 1196 A+ + R+ L+++ ++ + A + + A+ Sbjct: 637 ALTLRMRDGRNPAAIFDVLQAMGLVRLHADDDAMREHIAQNTIPEDAVTVATNDEATALN 696 Query: 1197 KGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGK 1256 + + + RT + I R ++ + + + + Sbjct: 697 ERIRTVRIEAGEVDN------ARTVTGSDGLAIGVGDLVQARQNDAELRVANRQTFTVQQ 750 Query: 1257 EQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNT 1316 V D + T A + G+ Sbjct: 751 ISEDGTVHAIETGTDRKHNVTVTLPPGYVAEHVHLAYAATAYGVQGITVDSAHTVLSDAL 810 Query: 1317 RLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSD 1376 + + G I + R + TA + +++ Sbjct: 811 DAAAVYVGLTRGSGRNELHVIAADLAEARGQFVEAMGRDRADRGLTEATARANEAIAGLV 870 Query: 1377 GQQTREIRPGQEQAEQHI------DLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFE 1430 + + + A+ R E Sbjct: 871 KNGPISMVSEELARLDGLAEKAEQRAAW-----------WENVGDQLTGLSARHRDETDE 919 Query: 1431 SAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARE 1490 S AL+ ++H + + A + V E + F R Sbjct: 920 ST-TALTTAEEHATTVRADTLAPLETRAKAEGREYLDAVGEEAQAAGRLATAGWFGKRRA 978 Query: 1491 LRDVAAGRAVLRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKS----AGIWLNPL 1546 R+ R + G + + A AG + Sbjct: 979 QREHDTAREHAQALRGRLSSEWGTLPRHGGDLDEWVGRVAAQRAEESPEVVEAGEAVVEA 1038 Query: 1547 TTDDGNGLRGFSGEGRVKGSGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVR 1606 + + ++ R+ + L + + R A S R Sbjct: 1039 RQARTGLQERQRRDRLTLLARLHGVDNVR--RDPDRYLRTSPR---REAAKWSASAEQAR 1093 Query: 1607 IAGEGRPWNPGAITGGRVWGDIPDNSVQPGAGNGEPVTAEVLAQRQAEEAIRRETERRA 1665 P +I + + ++ ++ + R Sbjct: 1094 ADAAELRGLP--PDQAADLIEIKRATAEAHETALRERQRQLPDEQDPARSTPRREGPAR 1150 Score = 76.2 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 83/629 (13%), Positives = 155/629 (24%), Gaps = 36/629 (5%) Query: 1147 DVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPM 1206 + + + L Q + + A + Sbjct: 530 NDDGVWTRLNPGDADPATGQTYTGPRKGARLVRGERVIVDEAGMLDQDTALALLTIIREA 589 Query: 1207 TLYEAIVRDYTGRTPEARE-QTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLN 1265 A+V D R H+ ++ + ++ L Sbjct: 590 KASVALVGDRAQLPAVGRGGVLDKAAHIRGATVDMSELHRFANDQYAALTLRMRDGRNPA 649 Query: 1266 TANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAV 1325 + + + ++ E + V Sbjct: 650 AIFDVLQAMGLVRLHADDDAMREHIAQNTIPEDAVTVATNDEATALNERIRTVRIEAGEV 709 Query: 1326 AEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDS-----VTLSDGQQT 1380 T+ D + +G GD ++ ++D E +TV +S D T +D + Sbjct: 710 DNARTVTGSDGLAIGVGDLVQARQNDAELRVANRQTFTVQQISEDGTVHAIETGTDRKHN 769 Query: 1381 REIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSR-- 1438 + +H+ LAYA TA+G QG + A + + YV L+R Sbjct: 770 VTVTLPPGYVAEHVHLAYAATAYGVQGITVDSAHTVLSDA------LDAAAVYVGLTRGS 823 Query: 1439 MKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGR 1498 + + V + A+ + A R A + V+ Sbjct: 824 GRNELHVIAADLAEARGQFVEAMGRDRADRGLTEATAR-ANEAIAGLVKNGPISMVSEEL 882 Query: 1499 AVLRQAGLAGGDSPARFIAPGRKY-PQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGF 1557 A L A + G + D + + TT + L Sbjct: 883 ARLDGLAEKAEQRAAWWENVGDQLTGLSARHRDETDESTTALTTAEEHATTVRADTLAPL 942 Query: 1558 SGEGRVKGSGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPG 1617 + +G + ++ L R R++ + + G Sbjct: 943 ETRAKAEGRE-YLDAVGEEAQAAGRLATAGWFGKRRAQREHDTAREHAQALRGRLSSEWG 1001 Query: 1618 AITGGRVWGDIPDNSVQPGAGNGEPVTAEVLAQRQAEEAIRRETERRAD----------- 1666 + D V P E R + R Sbjct: 1002 TLPRHGGDLDEWVGRVAAQRAEESPEVVEAGEAVVEARQARTGLQERQRRDRLTLLARLH 1061 Query: 1667 --EIVRKMAENKPDLPDGKTEQAVREIAGQERDRAAITEREAALPEGVLREPQRVREAVR 1724 + VR+ + + A Q R AA L E +R Sbjct: 1062 GVDNVRRDPDRYLRTSPRREAAKWSASAEQARADAAELRGLPPDQAADLIEIKRATAEAH 1121 Query: 1725 EIARENLLQERLQQM--ERDMVRDLQKEK 1751 E A L+ER +Q+ E+D R + + Sbjct: 1122 ETA----LRERQRQLPDEQDPARSTPRRE 1146 >UniRef50_B4RTM2 Exodeoxyribonuclease V, alpha subunit n=1 Tax=Alteromonas macleodii 'Deep ecotype' RepID=B4RTM2_ALTMD Length = 731 Score = 244 bits (621), Expect = 3e-62, Method: Composition-based stats. Identities = 89/646 (13%), Positives = 181/646 (28%), Gaps = 103/646 (15%) Query: 889 TEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHIL 948 +A E T L + + + L + V Y G L SR YE E+ + R ++ Sbjct: 112 EKAPKTGFEVPELTPLLKIVKSALGNEQLAKLFV---YDNGRLYSRRYYEFEQEVARSVV 168 Query: 949 EGK------EAVMPLMERVPGELMEKLTSGQRA----ATRMILETSDRFTVVQGYAGVGK 998 E + V ++ + + T+ Q+ A L RF V+ G G GK Sbjct: 169 ERAVLHPLHDDVADNVKALWPAIFPTTTTDQQDWQQIAVAKSLM--QRFCVINGGPGTGK 226 Query: 999 TTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGV-------------------- 1038 T ++ A+ E ++V PT +A M + + Sbjct: 227 TYTVLRLLLALQACDEE--LKIVLAAPTGKAQQRMTESIMNSVEGLRGKVSDTALDSVPT 284 Query: 1039 DAQTLASFLHDTQLQ--QRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVA 1096 +A TL L + + + S + ++DE+SMV M R R Sbjct: 285 EAVTLHRLLGLREHGVATKYNQHNKLSADVLIVDEASMVDLALMTRIVR-ALPDHARLYF 343 Query: 1097 SGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLE 1156 GD DQL A+ G + D + + N + Sbjct: 344 IGDADQLPAVELGNVLEQLVS----DETALDFSH---ENPLAGGENSSNERTLGGVPSSM 396 Query: 1157 SVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDY 1216 + + + + +A Q A + AI + Sbjct: 397 RQHIATLCPHLPLLPVNEQAKSYVATLQAPQRFKGQVARVATAIQRGDANGALAAIAQ-- 454 Query: 1217 TGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGEL-----GKEQVMVPVLNTANIRD 1271 + +++ + D + +N+ + L + + + + + Sbjct: 455 --KNSGSKQGDNASQPKSADEKSINTNSRSRLQPGVHLWPESQLGGRELQQLAKESFLPL 512 Query: 1272 GELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTL 1331 E + + + + + G+ + L+ Sbjct: 513 FEAQSAEEALNRLNYVRWLTPIRKGAMGVEGLNNLV-----------------FDAIKHK 555 Query: 1332 YTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSD--------------- 1376 G + K+ + V + S + Sbjct: 556 IRRREGHFYQGQPIMIVKNHHPQRLSNGEVGVIWPDSTGKLYAWFYQDTYVEGQQAGKSL 615 Query: 1377 ------------GQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRK 1424 GQQ + +R + YA+T H +QG+ + + + K Sbjct: 616 NDSSNNSSAQNLGQQKQALRSISLSRVPQFETVYAMTIHKSQGSEFNHVVLILPKPESEK 675 Query: 1425 --LMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHD 1468 + Y L+R K + +D+ ++ + ++ + Sbjct: 676 AANLFHRGLVYTGLTRAKDGCLIISDS-NTFSGMVATVDKRYSGLS 720 Score = 109 bits (272), Expect = 1e-21, Method: Composition-based stats. Identities = 66/557 (11%), Positives = 139/557 (24%), Gaps = 115/557 (20%) Query: 377 KGLFTSGIHVLD---ELSVRALSRDIMKQNRVTVHPEKSVPRTAGYS--DAVSVLAQDRP 431 + + V E +V D + N + P T ++V Sbjct: 154 RRYYEFEQEVARSVVERAVLHPLHDDVADNVKALWPAIFPTTTTDQQDWQQIAVAKSLMQ 213 Query: 432 SLAIVSGQGGAAGQRERVAELVMMAREQG--REVQIIAADRRSQMNMKQD-----ERL-- 482 +++G G G+ V L++ + ++ + A ++Q M + E L Sbjct: 214 RFCVINGGPG-TGKTYTVLRLLLALQACDEELKIVLAAPTGKAQQRMTESIMNSVEGLRG 272 Query: 483 ------------SGELITGRRQLLEGMAFTPG--------STVIVDQGEKLSLKETLTLL 522 + L E T +IVD+ + L ++ Sbjct: 273 KVSDTALDSVPTEAVTLHRLLGLREHGVATKYNQHNKLSADVLIVDEASMVDLALMTRIV 332 Query: 523 DGAARHNVQVLITDSGQRTGT--GSALMAMKD-------------------------AGV 555 H I D+ Q G+ L + GV Sbjct: 333 RALPDHARLYFIGDADQLPAVELGNVLEQLVSDETALDFSHENPLAGGENSSNERTLGGV 392 Query: 556 NTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAI- 614 + Q + P + +A + + + VA+V+ ++ A+ Sbjct: 393 PSSMRQHIATLCPHLPLLPVNEQAKSYVAT--LQAPQRFKGQVARVATAIQRGDANGALA 450 Query: 615 ---------RSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRS 665 + E ++ S L + G ++Q E+ Sbjct: 451 AIAQKNSGSKQGDNASQPKSADEKSINTNSRSRLQPGVHLWPESQLGGRELQQLAKESFL 510 Query: 666 HDRYVIDRVTAQSHSLTLRD-----AQGETQVVRISSL--DSSWSLFRPEKMPVADGERL 718 + + L +G V +++L D+ R + G+ + Sbjct: 511 P-LFEAQSAEEALNRLNYVRWLTPIRKGAMGVEGLNNLVFDAIKHKIRRREGHFYQGQPI 569 Query: 719 RVTGKIPGLRVSGGDRLQVASVSEDAM--------------------------TVVVPGR 752 + R+S G+ + S + + G+ Sbjct: 570 MIVKNHHPQRLSNGEVGVIWPDSTGKLYAWFYQDTYVEGQQAGKSLNDSSNNSSAQNLGQ 629 Query: 753 AEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAM-------DNATLNGL 805 + A +S S + + V + GL Sbjct: 630 QKQALRSISLSRVPQFETVYAMTIHKSQGSEFNHVVLILPKPESEKAANLFHRGLVYTGL 689 Query: 806 ARSGRDVRLYSSLDETR 822 R+ + S + Sbjct: 690 TRAKDGCLIISDSNTFS 706 >UniRef50_A3ZSA6 Possible Viral (Superfamily 1) RNA helicase n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZSA6_9PLAN Length = 1276 Score = 243 bits (620), Expect = 4e-62, Method: Composition-based stats. Identities = 162/1056 (15%), Positives = 297/1056 (28%), Gaps = 113/1056 (10%) Query: 524 GAARHNVQVLIT-DSGQRTG----------TGSALMAMKDAGVNTYRW----QGGEQRPA 568 +VLI + G G L +M + T+ G P Sbjct: 201 LVEDVGRRVLIGVGRVKHLGKFTEYKYDGDPGDQLRSMLWECMVTHSIRPDCTDGFLLPY 260 Query: 569 TIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPE 628 R A A S + + AI + L + L Sbjct: 261 HEALIKSDEGRAFNPADAVAFSPDDRFNEFSYGTEHVSNDA---AISALLSIRDALQRSS 317 Query: 629 VTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQG 688 +S R L WN + T +TL + Sbjct: 318 ELFGYVSDAHEKWVDRELG---------RLWNKRGPFPGIGSVLTAT----GVTLGNFVA 364 Query: 689 ETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVV 748 + + ++ DS W + + + +I R+ S + Sbjct: 365 QALIDKVGEKDSPWPAWFAALEDPSSHLPAELARRIDKTIAKSWKRMGTGRRSFLELLSR 424 Query: 749 VPGRAEPATLPVSDSPFTALKL---ENGWVETPGHSVSDSATVFASVTQMAMDN-ATLNG 804 + + A++ VS ++ ++ +V P + V+ +D N Sbjct: 425 LDLTQDQASVLVSPEEREDWEINCTDDDFVANPYLIYETTRLAADPVSIGIVDRGLFPNA 484 Query: 805 LARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPA 864 + RS + E + ++ + A + Sbjct: 485 MIRSK------FPIPEPSIVKTAVDTRRLRALTIRNLEDAAQNGDTLRQRADVIRDLRRH 538 Query: 865 QQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAK 924 V + + + +L + ++ GDL+ V Sbjct: 539 AGDDDEQKAQVTADLMTVAEEELFKDEIRIVKMADDRAAY--QLERLGAAGDLIRRTVEN 596 Query: 925 GYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETS 984 S + + L LE V+P V +E+L ++ A L +S Sbjct: 597 RIDGKRHESTTDW---RKSLNSFLESNGVVLPG--DVGEREIEELARKEKTAALEELASS 651 Query: 985 DRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRS----AGV-- 1038 RF+V+ G AG GKTT + + + E V+ L PT +A M AG+ Sbjct: 652 -RFSVLIGRAGTGKTTLLSVLCAQPRISKEG----VLLLAPTGKARVRMEDVARKAGIKN 706 Query: 1039 -DAQTLASFLHDTQLQQRS--------GETPDFSNTLFLLDESSMVGNTDMARAYALIAA 1089 A TLA L + R+ + T+ ++DE SM+ MA + Sbjct: 707 SQAFTLAQHLSQSGRYDRNTQRYLLTGKRGDPLAKTV-IVDECSMLTEEMMAALIESLIK 765 Query: 1090 GGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVE 1149 R + GD QL I G+PF TR DV E + E Sbjct: 766 VD-RLIFVGDYRQLPPIGAGRPFIDIVTRLQPDVFPADE------------PHVAPGYTE 812 Query: 1150 RALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLY 1209 + RQ + + + S E + Q +L G+ + + Sbjct: 813 LMIPR----------RQGAGERDDLLLASWFGSGETSAGDDQVFEILSGKRKSETVEFVT 862 Query: 1210 EAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANI 1269 + + P+ +TL NED + + + + +G + + Sbjct: 863 WETPDELERKLPKVLRETLEFKAENEDWQAFSISLGGNPDDSGSI----WFNGKWGKFDG 918 Query: 1270 RDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGV 1329 R V+ + I K+ + ++ +G + SP Sbjct: 919 AGVAAEAWQILSPVRQKPWGVETLNRLIHRYYKERTIEQARNFKGRRSIPSPMGEHQIVY 978 Query: 1330 TLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTA--------VSGDSVTLSDGQQTR 1381 + + + D++ + V + + Q Sbjct: 979 GDKVINNRNQRMYKKRMYPTPDKDGYLANGEIGVVIGHRRTKKKSWDPKYLEIEFSTQQG 1038 Query: 1382 EIR-----PGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVAL 1436 +E+ E ++LAYA+T H AQG+ + LM E Y AL Sbjct: 1039 TSFKFYPSDFKEEGEASLELAYALTVHKAQGSEFKKVFLVLPRSP---LMVTRELLYTAL 1095 Query: 1437 SRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAA 1496 +R K+ V V ++ A + + + F R + + Sbjct: 1096 TRQKEKVVVLLQGSATDLHRFSSERFSAAACRLTNLFGPPRPIEIKGAFLEERLIHNTTR 1155 Query: 1497 GRAVLRQAGLAGGDSP-ARFIAPGRKYPQPYVALPA 1531 G V ++ + + A+ I + P Sbjct: 1156 GELVRSKSEVIIANLLHAKKIEYDYEVELTLDGEPQ 1191 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 80/764 (10%), Positives = 172/764 (22%), Gaps = 109/764 (14%) Query: 265 KQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAI 324 K VD A ++ L++ + R AD DLR Q +T A Sbjct: 499 KTAVDTRRLRALTIRNLEDAAQNGDTLRQRADVIRDLRRHAGDDDEQKAQVTADLMTVAE 558 Query: 325 AGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGI 384 L + ++ R V + + I R +D ++ T+ Sbjct: 559 EELFKDEI---------RIVKMADDRAAYQLERLGAAGDLIRRTVENRIDGKRHESTTDW 609 Query: 385 HVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAG 444 + + + E + A+ LA +++ G+ G G Sbjct: 610 RKSLNSFL---ESNGVVLPGDVGEREIEELARKEKTAALEELASS--RFSVLIGRAG-TG 663 Query: 445 QRERVAELVMMAREQGREVQIIAADRRSQMNMK---QDERL---SGELITGRRQLLEGMA 498 + ++ L R V ++A ++++ M+ + + + Sbjct: 664 KTTLLSVLCAQPRISKEGVLLLAPTGKARVRMEDVARKAGIKNSQAFTLAQHLSQSGRYD 723 Query: 499 F---------TPGS----TVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR--TGT 543 G TVIVD+ L+ + L++ + + + + D Q G Sbjct: 724 RNTQRYLLTGKRGDPLAKTVIVDECSMLTEEMMAALIESLIKVDRLIFVGDYRQLPPIGA 783 Query: 544 GSALMAM------------KDAGVNTYRWQGGEQRPATIISEP-------DRNVRYARLA 584 G + + + Y +R + A Sbjct: 784 GRPFIDIVTRLQPDVFPADEPHVAPGYTELMIPRRQGAGERDDLLLASWFGSGETSAGDD 843 Query: 585 GDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSR 644 F + + L + + L+ A S + Sbjct: 844 QVFEILSGKRKSETVEFVTWETPDELERKLPKVLRETLEFKAENEDWQAFSISLGGNPDD 903 Query: 645 YLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSL 704 + + + TL R ++ Sbjct: 904 SGSIWFNGKWGKFDGAGVAAEAWQILSPVRQKPWGVETLNRLIHRYYKERTIEQARNFKG 963 Query: 705 FRP-----EKMPVADGERLRVTGK------------IPGLRVSGGDRLQVAS-------- 739 R + + G+++ ++ G+ V Sbjct: 964 RRSIPSPMGEHQIVYGDKVINNRNQRMYKKRMYPTPDKDGYLANGEIGVVIGHRRTKKKS 1023 Query: 740 VSEDAMTVVVPGRAEPATLPVSDSPFTA----LKLENGWVETPGHSVSDSAT--VFASVT 793 + + + + L+L V Sbjct: 1024 WDPKYLEIEFSTQQGTSFKFYPSDFKEEGEASLELAYALTVHKAQGSEFKKVFLVLPRSP 1083 Query: 794 QMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAI 853 M L R V + T + S T + Sbjct: 1084 LMVTRELLYTALTRQKEKVVVLLQGSATDLHRFSSERFSAAA------------CRLTNL 1131 Query: 854 SHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIK 913 + + +L S +++ A + E+ ++ + + Sbjct: 1132 FGPPRPIEIKGAFLEERLIHNTTRGELVRSKSEVIIANLLHAKKIEYDYEVELTLDGEPQ 1191 Query: 914 RGDLLYVDVAKGYGTGLL-----------VSRASYEAEKSILRH 946 + G SR E E+ H Sbjct: 1192 NKFPDFTIEDDDSGKKYYWEHLGMLGNQDYSRRWVEKEQWYRDH 1235 >UniRef50_Q480P0 Exodeoxyribonuclease V, alpha subunit n=1 Tax=Colwellia psychrerythraea 34H RepID=Q480P0_COLP3 Length = 769 Score = 243 bits (620), Expect = 4e-62, Method: Composition-based stats. Identities = 88/673 (13%), Positives = 183/673 (27%), Gaps = 136/673 (20%) Query: 893 SFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSI-----LRHI 947 + G F L + L L R ++ E + R + Sbjct: 128 ELSHAGFVFAPLTQLQVMLSELNILASDQQLLVLQHDKLYLRRYFQFESDLGEAIHARLL 187 Query: 948 LEGKEA-----------VMPLMERVPGELMEKLT-SGQRAATRMILETSDRFTVVQGYAG 995 + + + +V + +E L Q+ A + + F+V+ G G Sbjct: 188 QQCQYDNDSIGQCIGKLFPNDLAQVEAQDVESLEIDWQKVAVANAI--NKNFSVIAGGPG 245 Query: 996 VGKTTQFRAVMSAVNML-----------------PESER---PRVVGLGPTHRAVGEMRS 1035 GKT +++A+ ML + + + + PT +A + Sbjct: 246 TGKTYTVTKLLAALVMLEQMGLAKTGKQQAEVAQQKQQGTAVLNIALVAPTGKAAQRLSE 305 Query: 1036 AGV--------------------DAQTLASFLHDTQL--QQRSGETPDFSNTLFLLDESS 1073 + V AQTL L R + + L+DE S Sbjct: 306 SIVNAISGFKNLIDDKVLAEIPTQAQTLHRLLGVLPNSPNFRHHQDNRLPYDIVLIDEVS 365 Query: 1074 MVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTR-SAADVAIMKEIVRQ 1132 MV M R + + + GD DQL ++A G R ++ + Q Sbjct: 366 MVDLPLMTRVFR-ALKDTAKVILLGDADQLPSVAAGSVLADIAPRPHGGFSLENEQYLAQ 424 Query: 1133 TPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQ 1192 +L A + R A + S + +++ + + Sbjct: 425 VCQLLPA----------------QVSDYFSAHRLPSQSAEQSSFDYLTFLVKSRRFDGKG 468 Query: 1193 KAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAG 1252 L + + ++ D ++ + I +AG Sbjct: 469 GIGLIANSVIKGDVKRSWRLLNDSLSQSTQEG------------------FIQGDYLQAG 510 Query: 1253 ELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDA 1312 L ++ + + G+L + + A + + Sbjct: 511 YLQGDKSQKQQPSQLTLAQGDLTTWLAPLVKQYYQPIEHCSTVSDAFVLLSQFRVLCATR 570 Query: 1313 EGNTRLISPRE----AVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAV- 1367 +G+ + E + + Y + G + ++D G + + V Sbjct: 571 QGDYGVERLNEVIKSYLGKNNAPYQQHQQTLYHGQPIMINENDYRLGLYNGDIGIIWKVI 630 Query: 1368 ---------------------SGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQ 1406 + V S IR + YA+T H Q Sbjct: 631 DQAGKTHLMACFEDTTLESKSAESKVDESTETSQLTIRQILPSRLPQFESVYAMTIHKTQ 690 Query: 1407 GASETFAIALEGTEGNR------------KLMAGFESAYVALSRMKQHVQVYTDNRQGWT 1454 G+ + + + + E Y ++R K+ + + N++ W Sbjct: 691 GSEFSHVAMVISATQSEQQTLQQGKQQGGSRLLSRELLYTGITRAKKQLTI-AANQRVWQ 749 Query: 1455 DAINNAVQKGTAH 1467 + V++ + Sbjct: 750 QGVTAQVKRHSGL 762 Score = 107 bits (265), Expect = 6e-21, Method: Composition-based stats. Identities = 62/627 (9%), Positives = 143/627 (22%), Gaps = 139/627 (22%) Query: 325 AGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGI 384 LS F L + L + D+ R + + Sbjct: 127 QELSHAGFVFAPLTQLQVMLSELNILASDQQLLVLQHDKLYLRRYFQFESDLGEAIHARL 186 Query: 385 HVL---DELSVRALSRDIMKQNRVTVHPEKSVPRTAG-YSDAVSVLAQDRPSLAIVSGQG 440 D S+ + + V + AV+ S+ G Sbjct: 187 LQQCQYDNDSIGQCIGKLFPNDLAQVEAQDVESLEIDWQKVAVANAINKNFSVIA---GG 243 Query: 441 GAAGQRERVAELVMMA---REQGR---------------------EVQIIAADRRSQMNM 476 G+ V +L+ + G + ++A ++ + Sbjct: 244 PGTGKTYTVTKLLAALVMLEQMGLAKTGKQQAEVAQQKQQGTAVLNIALVAPTGKAAQRL 303 Query: 477 KQD-----ERL--------------SGELITGRRQLLE--------GMAFTPGSTVIVDQ 509 + + + +L P V++D+ Sbjct: 304 SESIVNAISGFKNLIDDKVLAEIPTQAQTLHRLLGVLPNSPNFRHHQDNRLPYDIVLIDE 363 Query: 510 GEKLSLKETLTLLDGAARHNVQVLITDSGQR--TGTGSALMAMKDAGVNTYRWQGGEQRP 567 + L + +L+ D+ Q GS L + + + + Sbjct: 364 VSMVDLPLMTRVFRALKDTAKVILLGDADQLPSVAAGSVLADIAPRPHGGFSLENEQYLA 423 Query: 568 ATIISEPDRN-----------VRYARLAGDFAASVKAGEE------------SVAQVSGV 604 P + + + D+ + SV + Sbjct: 424 QVCQLLPAQVSDYFSAHRLPSQSAEQSSFDYLTFLVKSRRFDGKGGIGLIANSVIKGDVK 483 Query: 605 REQAILTQAIRSELKT---------QGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMV 655 R +L ++ + G L + P L L P + Sbjct: 484 RSWRLLNDSLSQSTQEGFIQGDYLQAGYLQGDKS--QKQQPSQLTLAQGDLTTWLAP--L 539 Query: 656 MEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSL-----FRPEKM 710 ++Q+ V + QG+ V R++ + S+ ++ + Sbjct: 540 VKQYYQPIEHCSTVSDAFVLLSQFRVLCATRQGDYGVERLNEVIKSYLGKNNAPYQQHQQ 599 Query: 711 PVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLP----------- 759 + G+ + + L + GD + V + A + E TL Sbjct: 600 TLYHGQPIMINENDYRLGLYNGDIGIIWKVIDQAGKTHLMACFEDTTLESKSAESKVDES 659 Query: 760 ----------VSDSPFTALKLENGWVETPGHSVSDSATVFA-----------------SV 792 + S + S Sbjct: 660 TETSQLTIRQILPSRLPQFESVYAMTIHKTQGSEFSHVAMVISATQSEQQTLQQGKQQGG 719 Query: 793 TQMAMDNATLNGLARSGRDVRLYSSLD 819 +++ G+ R+ + + + ++ Sbjct: 720 SRLLSRELLYTGITRAKKQLTIAANQR 746 >UniRef50_C2AVA8 TrwC relaxase n=1 Tax=Tsukamurella paurometabola DSM 20162 RepID=C2AVA8_TSUPA Length = 1024 Score = 242 bits (618), Expect = 6e-62, Method: Composition-based stats. Identities = 122/861 (14%), Positives = 227/861 (26%), Gaps = 171/861 (19%) Query: 67 SRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGD---KRLIDAHNQAVDFAVRQVEALAST 123 R + + + GYDLTF+ KSVS++ LG + + + H +A D ++R +E A Sbjct: 173 GRQRAATRQPVAGYDLTFTPVKSVSVLWSLGDEDTRRTIEACHREAADESIRYLEDNALV 232 Query: 124 RVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQ-HNGEWKTLSSDKVGK 182 + G LV+A F+H +RD EP LHTH V+N +G W ++ K Sbjct: 233 TRRGGKGEAQIDAGGLVIAAFDHYDNRDGEPNLHTHYAVSNKVLGSDGRWSSIDGTPWFK 292 Query: 183 TGFIENVYANQIAFGRLYREKLKEQVE-ALGYETEVV----GKHGMWEMPGVPVEAFSG- 236 Y L +++ LG E K + E+ G+ + Sbjct: 293 A---------ASTASARYNAALADKLTDRLGVEFRSRSKGADKEPVLEIAGITDTRIASH 343 Query: 237 --RSQTIREAVGED---------------ASLKSRDVAALDTRKSKQHVDPEIKMAEWMQ 279 R+ TI + E A + R A LDTR++K + Sbjct: 344 AGRTATIEQRYAELEADYIDRHQRAPGRAARYQLRQKANLDTRRAKAALATGSAADRGDG 403 Query: 280 TLKETGF----------DIRAYRDAADQRADLRTLTPGPASQDGPDV-------QQAVTQ 322 G D+ A+ DAA RA L A + Sbjct: 404 AAVVHGLGATLERARKVDVAAHPDAARGRALLEHCQAEAARLTDFRADTARLSVDELADL 463 Query: 323 AIAGLSERKVQFT--------------------------YTDVLARTVGILPPENGVIER 356 A L +R ++ D++ + + ++ I+ Sbjct: 464 TTAKLEQRFNSWSPTTVTRWATIVVAQQATEGTLPDGVARADLIEQVTAAVTRDSLRIDA 523 Query: 357 ARAGIDEAI---------SREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTV 407 +D + + I L TS V E ++ S + Sbjct: 524 VHPVLDTSTGLIPEAMQRRNGEHILTPVGSTLLTSTRVVESEHNLILASETVTSTVATDA 583 Query: 408 H---------PEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMARE 458 E G + V LA+ G G G+ + + Sbjct: 584 AVKAAIAAVGEETGFALNEGQARLVEHFCSSGALLAVGVGPAG-TGKTTSMKATIAAWEN 642 Query: 459 --------QGREVQIIAADRRSQMNMKQDERL--------SGELIT-------------- 488 QGR+V +A + M + + + + I Sbjct: 643 TTGLPQSVQGRKVIALAPSAAAAMKLGDELGMGTSGDPADAARTIDTEVVFFTANMKALA 702 Query: 489 -----------GRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDS 537 R + GS ++VD+ S +L A V + Sbjct: 703 AAREAGDTTQVKRLRERMTRRIPRGSMLLVDEAGMASTANLHEILRIAKATGSVVRLLGD 762 Query: 538 GQRTGT---GSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAG 594 + G AL + + + ++ ++ D Sbjct: 763 PLQLDAVDRGGALELLAKHTDAPTLTKVVRFVQSERAADGTLAAATTQVVEDGVEKTVKK 822 Query: 595 EESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGM 654 + +G AL+ Sbjct: 823 GLDTIAAENSLRMRDGHHDSLTMFDERGWTHHHSAKEAALT------------------D 864 Query: 655 VMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVAD 714 V+ + + ++ T + + + + + ++ + + Sbjct: 865 VVAAHLADQQRGSNAMVVATTRAD--VKTLNEMLQAHHRETGTDRTDRTVSLSDGLTAGR 922 Query: 715 GERLRVTGKIPGLR---------VSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPF 765 G+ + I R ++ G+ V + D +D Sbjct: 923 GDIIVTRDNIKIKRRGGSHDRMPIANGELWTVEKIDRDGGITARNIDDGGRIELPADYLR 982 Query: 766 TALKLENGWVETPGHSVSDSA 786 +L + Sbjct: 983 ANTELGYALTIHRSQGATVDT 1003 Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 92/613 (15%), Positives = 185/613 (30%), Gaps = 64/613 (10%) Query: 773 GWVETPGHSVSDSATV-FASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHP 831 V G ++ + V A+ A A L + + + + ++LA Sbjct: 405 AVVHGLGATLERARKVDVAAHPDAARGRALLEHCQAEAARLTDFRADTARLSVDELADLT 464 Query: 832 SFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEA 891 + + + I + A + A ++E A + L +A Sbjct: 465 TAKLEQRFNSWSPTTVTRWATIVVAQQATEGTLPDGVARA-DLIEQVTAAVTRDSLRIDA 523 Query: 892 KSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSIL------R 945 + + Q + G+ + V G+ LL S E+E +++ Sbjct: 524 VHPVLDTSTGLIPEA---MQRRNGEHILTPV----GSTLLTSTRVVESEHNLILASETVT 576 Query: 946 HILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAV 1005 + AV + V E L GQ + V G AG GKTT +A Sbjct: 577 STVATDAAVKAAIAAVGEETGFALNEGQARLVEHFCSSGALLAVGVGPAGTGKTTSMKAT 636 Query: 1006 MSAVNML----PESERPRVV----------------GLGPTHRAVGEMRS---------A 1036 ++A + +V+ G+G + R+ A Sbjct: 637 IAAWENTTGLPQSVQGRKVIALAPSAAAAMKLGDELGMGTSGDPADAARTIDTEVVFFTA 696 Query: 1037 GVDAQTLASFLHDTQLQQRSGET---PDFSNTLFLLDESSMVGNTDMARAYALIAAGGGR 1093 + A A DT +R E ++ L+DE+ M ++ + A G Sbjct: 697 NMKALAAAREAGDTTQVKRLRERMTRRIPRGSMLLVDEAGMASTANLHEILRIAKATGSV 756 Query: 1094 AVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALS 1153 GD QL A+ G L + A + ++VR R A + + A + Sbjct: 757 VRLLGDPLQLDAVDRGGALELLAKHTDAPT--LTKVVRFVQSERAA-----DGTLAAATT 809 Query: 1154 GLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIV 1213 + + ++ + L ++ + + +V Sbjct: 810 QVVEDGVEKTVKKGLDTIAAENSLRMRDGHHDSLTMFDERGWTHHHSAKE---AALTDVV 866 Query: 1214 RDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVM-----VPVLNTAN 1268 + + ++V D + LN M+ + G ++ + + Sbjct: 867 AAHLA-DQQRGSNAMVVATTRADVKTLNEMLQAHHRETGTDRTDRTVSLSDGLTAGRGDI 925 Query: 1269 IRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEG 1328 I + ++ D + + + + I + DG IT ++ + R+ P + + Sbjct: 926 IVTRDNIKIKRRGGSHDRMPIANGELWTVEKIDR-DGGITARNIDDGGRIELPADYLRAN 984 Query: 1329 VTLYTPDTIRVGT 1341 L TI Sbjct: 985 TELGYALTIHRSQ 997 >UniRef50_A5N3G4 Predicted exodeoxyribonuclease n=26 Tax=Clostridium RepID=A5N3G4_CLOK5 Length = 750 Score = 242 bits (617), Expect = 1e-61, Method: Composition-based stats. Identities = 105/649 (16%), Positives = 190/649 (29%), Gaps = 130/649 (20%) Query: 859 ALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLL 918 Q I + S+ + +D+L + G EL I G + Sbjct: 205 DSPFRVQSGIKYLINKFCSRGNTYVPIDVLIR-NGMSILGVSQKELEKNIYESSLNGKIK 263 Query: 919 YVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLME--------RVPGELMEKLT 970 K + S Y E S+ + IL ++ K Sbjct: 264 VE---KYGDKICVFSMTYYYCELSVTKKILTLAFNKCKDIDLNIYEEIKNFEKANNIKFA 320 Query: 971 SGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAV 1030 Q+ A + +E S T +++ + L E +V+ PT RA Sbjct: 321 FSQKEAIKGSVENSVEIITGGPG------TGKTTIINCMIQLFEKSNLKVLMAAPTGRAA 374 Query: 1031 GEMRSAG-VDAQTLASFLH------DTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARA 1083 M A +A+T+ L D L GE + ++DE+SM+ M Sbjct: 375 KRMSEATKREAKTIHRLLEIGVESDDEALFFSRGEESPLQCDVVIIDEASMIDIVMMNNL 434 Query: 1084 YALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSL 1143 I + R + GD++QL ++ PG R V +KEI RQ+ E V + Sbjct: 435 LKAI-SLKTRLIIVGDSEQLPSVGPGNVLRDLIDSRCIKVVRLKEIFRQSRESMIIVNAH 493 Query: 1144 INRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPD 1203 E + KL + L+ + Sbjct: 494 KINLGEMPI------------------------------LNKKLKDFYFIKALEFSNILN 523 Query: 1204 VPMTLYEAIVRDYTGRTPEAREQTLIVTHLNE---DRRVLNSMIHDVREKAGELGKEQVM 1260 + + L + + G + + I++ + + LN + + Sbjct: 524 LLVELANKRLPAFNGHW-DKMKHIQILSPMRKGILGVSNLNRKLQEALNPKS-------- 574 Query: 1261 VPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLIS 1320 N + + R + + + +N + IS + Sbjct: 575 -------NNKKEKYFRDMIFRVGDKVMQIKNNYTLKWTVISGEKE--------------- 612 Query: 1321 PREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQT 1380 + + GD D E+ TVT + + + Sbjct: 613 -------------EKGMGIFNGDFGYIEDIDEEKD-------TVTVIFDEEKRVV----- 647 Query: 1381 REIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMK 1440 +DLAY IT H +QG+ I L+ Y A++R K Sbjct: 648 -----YDSICLDELDLAYGITIHKSQGSEFPVIIVPMF--MGPVLLMNRNLLYTAITRAK 700 Query: 1441 QHVQVYTDNRQGWTDAINNAV--QKGTAH-----DVFEPKPDREVMNAE 1482 + V + + + T I+N ++ + D+ E + D + E Sbjct: 701 EMVVLV-GDLRALTFMISNNKSFERYSLLKYRIMDIMESEVDVTLEQNE 748 Score = 160 bits (403), Expect = 5e-37, Method: Composition-based stats. Identities = 65/610 (10%), Positives = 148/610 (24%), Gaps = 89/610 (14%) Query: 289 RAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILP 348 + AD G VQ + I R + DVL R + Sbjct: 183 EEISGIGFKIADKIARGLGIEKDSPFRVQSGIKYLINKFCSRGNTYVPIDVLIR--NGMS 240 Query: 349 PENGVIERARAGIDEAISREQL-IPLDREKGLFTSGIHVLDELSVRALSRDIMK------ 401 + I E+ ++ + +K S + ELSV + Sbjct: 241 ILGVSQKELEKNIYESSLNGKIKVEKYGDKICVFSMTYYYCELSVTKKILTLAFNKCKDI 300 Query: 402 -----QNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMA 456 + ++ +A+ ++ + G + ++ + Sbjct: 301 DLNIYEEIKNFEKANNIKFAFSQKEAIKGSVENSVEIITGGPGTGKT---TIINCMIQLF 357 Query: 457 REQGREVQIIAADRRSQMNMKQDERLSGELITGRRQL------------LEGMAFTPGST 504 + +V + A R+ M + + + I ++ + Sbjct: 358 EKSNLKVLMAAPTGRAAKRMSEATKREAKTIHRLLEIGVESDDEALFFSRGEESPLQCDV 417 Query: 505 VIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR--TGTGSALMAMKDAGVNTYRWQG 562 VI+D+ + + LL + +++ DS Q G G+ L + D+ Sbjct: 418 VIIDEASMIDIVMMNNLLKAISLKTRLIIVGDSEQLPSVGPGNVLRDLIDSRCIKVVRLK 477 Query: 563 GEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQG 622 R + + + + +L + L Sbjct: 478 EIFRQSRESMIIVNAHKINLGEMPILNKKLKDFYFIKALEFSNILNLLVELANKRLPAFN 537 Query: 623 VLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLT 682 + LSP M + + +R + + + +S++ Sbjct: 538 GHWDKMKHIQILSP-------------------MRKGILGVSNLNRKLQEALNPKSNN-- 576 Query: 683 LRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGL--------------R 728 + + + G+++ L Sbjct: 577 ------------------KKEKYFRDMI-FRVGDKVMQIKNNYTLKWTVISGEKEEKGMG 617 Query: 729 VSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATV 788 + GD + + E+ TV V E + L L G + Sbjct: 618 IFNGDFGYIEDIDEEKDTVTVIFD-EEKRVVYDSICLDELDLAYGITIHKSQGSEFPVII 676 Query: 789 FASVTQ---MAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAG 845 + N + R+ V L L + + + Sbjct: 677 VPMFMGPVLLMNRNLLYTAITRAKEMVVLVGDLRALTFMISNNKSFERYSLLKYRIMDIM 736 Query: 846 ETSLETAISH 855 E+ ++ + Sbjct: 737 ESEVDVTLEQ 746 >UniRef50_A8SRT9 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SRT9_9FIRM Length = 797 Score = 242 bits (616), Expect = 1e-61, Method: Composition-based stats. Identities = 91/771 (11%), Positives = 197/771 (25%), Gaps = 141/771 (18%) Query: 736 QVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQM 795 + E + + + VS + ++ ++ V+ + ++ Sbjct: 109 IIEEEPERLAEIRGISERKAREIAVSYNEKKEMQDALMFLSGLNIPVNLAVKIYNEYGDR 168 Query: 796 AMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISH 855 D N + D+ A++L A + + Sbjct: 169 LYDVVRTNPY-KIAEDITGIGFKTADEIADRLGIGKDSDFRVRAAIMYALSGANRLGHMY 227 Query: 856 QKSA------------LHTPAQQAIHLALPVVESKKLAFSM------------VDLLTEA 891 + P + + + + D+ +E+ Sbjct: 228 LPQKMLVDKTYDLLMNEYMPYDPELEMTICNQILELSVAGKIIVKELGLNGESRDVGSES 287 Query: 892 KSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSR-ASYEAEKSILRHILEG 950 + EG + ++ + +D T +V R Y E + R + Sbjct: 288 EKAGIEG-SESMFDDGFDSVFDTQAEVQIDAPPETHTENIVYRVGDYYTELNSARMLTAL 346 Query: 951 -------KEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFR 1003 K + +++ V E +L QR A + T Sbjct: 347 DIDFSKAKLNIDKVIKTVEDEEKIQLADAQRQAVEKAVGHGVAVITGGPG------TGKT 400 Query: 1004 AVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA-GVDAQTLASFLHDTQLQQRSG----- 1057 +++ + + ES R +V PT RA + A G AQT+ L G Sbjct: 401 TIINVLIRIYESLRMNIVLAAPTGRAAKRITEATGYAAQTIHRLLELNGGVDDDGDSVYV 460 Query: 1058 ----ETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFR 1113 E+ + ++DE SMV + + G R V GD++QL ++ PG + Sbjct: 461 FARNESNPLEADVIIIDEMSMVDSGIFYSLLKAVTP-GTRLVLVGDSNQLPSVGPGNVLK 519 Query: 1114 LQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPE 1173 V+++ I RQ + + +S +PR Sbjct: 520 DIIASGVFHVSVLDRIYRQGKDSDIIGNAHKINAGVHIEIKNKSEDFFFIPRNGYNEIIS 579 Query: 1174 HSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHL 1233 + + + + + Sbjct: 580 ELKVLMTKQ------------------------------LPSFFKVNSSDIQVLTPMRKF 609 Query: 1234 NEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNV 1293 + LN + ++ +G+ E V R + + + +N Sbjct: 610 DLGIENLNRQLQEILNPSGKGKPEYV---------------RGDVVFRQGDKVMQVKNNY 654 Query: 1294 YHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRE 1353 + T D + Sbjct: 655 KQEWKIMDPTGR------------------------FAKEEGVGVFNGDIGFVRTVDDYD 690 Query: 1354 RGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFA 1413 + + + + P + ++ A+AIT H +QG+ Sbjct: 691 Q----------------KIIVEFDDGRQSEYPY--NQLEELEHAFAITIHKSQGSEYP-- 730 Query: 1414 IALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKG 1464 + + + Y A++R ++ V + N I+N ++ Sbjct: 731 VVVLPLLRCPPKLLNRNLLYTAVTRARRCVVIV-GNIGLANAMIDNEDEQK 780 Score = 166 bits (419), Expect = 9e-39, Method: Composition-based stats. Identities = 55/502 (10%), Positives = 123/502 (24%), Gaps = 86/502 (17%) Query: 356 RARAGIDEAISREQLIPLDREKGLFT---SGIHVLDELSVRALSRDIMKQNRVTVHPEKS 412 +A ID + R +T S + + ++ + + TV E+ Sbjct: 310 QAEVQIDAPPETHTENIVYRVGDYYTELNSARMLTALDIDFSKAKLNIDKVIKTVEDEEK 369 Query: 413 VPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRS 472 + AV ++ G + L+ + + + A R+ Sbjct: 370 IQLADAQRQAVEKAVGHGVAVITGGPGTGKT---TIINVLIRIYESLRMNIVLAAPTGRA 426 Query: 473 QMNMKQDERLSGELITGRRQLLEGMAFTPG---------------STVIVDQGEKLSLKE 517 + + + + I +L G+ +I+D+ + Sbjct: 427 AKRITEATGYAAQTIHRLLELNGGVDDDGDSVYVFARNESNPLEADVIIIDEMSMVDSGI 486 Query: 518 TLTLLDGAARHNVQVLITDSGQR--TGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPD 575 +LL VL+ DS Q G G+ L + +GV R Sbjct: 487 FYSLLKAVTPGTRLVLVGDSNQLPSVGPGNVLKDIIASGVFHVSVLDRIYRQGKDSDIIG 546 Query: 576 RNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALS 635 + AG E+ + + I + L Sbjct: 547 NAHKIN--AGVHIEIKNKSEDFFFIP-----RNGYNEIISE--------------LKVLM 585 Query: 636 PVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRI 695 L S + + M +++ + +R + + + Sbjct: 586 TKQLPSFFKVNSSDIQVLTPMRKFDLGIENLNRQLQEILNP------------------- 626 Query: 696 SSLDSSWSLFRPEKMPVADGERLRVTGKIPGL-----------------RVSGGDRLQVA 738 + + G+++ V GD V Sbjct: 627 --SGKGKPEYVRGDVVFRQGDKVMQVKNNYKQEWKIMDPTGRFAKEEGVGVFNGDIGFVR 684 Query: 739 SVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASV---TQM 795 +V + ++V + + L+ V + ++ Sbjct: 685 TVDDYDQKIIVEFD-DGRQSEYPYNQLEELEHAFAITIHKSQGSEYPVVVLPLLRCPPKL 743 Query: 796 AMDNATLNGLARSGRDVRLYSS 817 N + R+ R V + + Sbjct: 744 LNRNLLYTAVTRARRCVVIVGN 765 >UniRef50_C8NA26 Probable exonuclease V, alpha subunit n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NA26_9GAMM Length = 606 Score = 242 bits (616), Expect = 1e-61, Method: Composition-based stats. Identities = 91/593 (15%), Positives = 162/593 (27%), Gaps = 41/593 (6%) Query: 888 LTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGL---LVSRASYEAEKSIL 944 L A + + LL D T L +Y+ E + Sbjct: 28 LQNAHDNGDTLIQLNDAQRAAADTLAATPLLADDDRAAPLTRRGDRLWISRNYQQEARLA 87 Query: 945 RHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRA 1004 + E A E +P + L + Q+ A R L S R ++ G G GKT Sbjct: 88 AMLRERLHAADTPAEPIPAD---GLRAEQQNAIR--LARSRRLALINGGPGTGKTYTIAR 142 Query: 1005 VMSAVNMLPESERPRVVGLGPTHRAVGEMRSA-------GVDAQTLASFLH-DTQLQQRS 1056 ++ A + R+ PT +A M + + AQTL L T Q R Sbjct: 143 LIHAEQQA--DPKIRIALAAPTGKAAKRMEESLAAAGVQDLPAQTLHRLLGIGTDGQARY 200 Query: 1057 GETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQ 1116 + + L ++DE+SM+ A R + GD DQL A+ PG Sbjct: 201 HMSRHLPHDLIIIDEASMLSLELAHALI-AATATDTRLILLGDADQLAAVEPGAILHDLS 259 Query: 1117 TRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSV 1176 A + E + + L+G + ++ + E Sbjct: 260 HHPALQNHRIT-----LRESQRFRADSGIGQLAAILNGDDGQHGERLLEALAPYKKEQLP 314 Query: 1177 TEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNED 1236 S +L A K FP V V+ D Sbjct: 315 LFCRESDGLRLQTAGAKTSADSHPFPCVAGEGRGGGVKTSRSDNTVTATSFDAGQPPVTD 374 Query: 1237 RRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHR 1296 + + + + L A ++ ++ + + L Sbjct: 375 KNAGHKNLRSQNSDEKTIHWYPTPDANLYRA--------LIAPYQPYLEKLQDAAANPQE 426 Query: 1297 IAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGD--RMRFTKSDRER 1354 + ++ G A+ + + + ++D + Sbjct: 427 LLNTYDQYRIL-CAGHHGALGTRRINAALRQLHQRAQGADPSLAYYHGLPLMILENDHRQ 485 Query: 1355 GYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAI 1414 L E P + AYA++ H +QG+ Sbjct: 486 QLYNGDTGICFEDDNG---LQLHLPGHEPVPLARLNPATLTDAYALSIHKSQGSEYPHVA 542 Query: 1415 ALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAH 1467 R + E Y ++R K + +Y + +A ++ T Sbjct: 543 LALDEHAER--LLSRELLYTGITRSKGRLDIYA-SADALKNAAATPTRRHTGL 592 Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats. Identities = 43/388 (11%), Positives = 107/388 (27%), Gaps = 23/388 (5%) Query: 332 VQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELS 391 T+ L A ++ PL R + E Sbjct: 26 TALQNAHDNGDTLIQLNDAQRAAADTLAATPLLADDDRAAPLTRRGDRLWISRNYQQEAR 85 Query: 392 VRALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAE 451 + A+ R+ + P + A +A+ LA+++G G G+ +A Sbjct: 86 LAAMLRERLHAADTPAEPIPADGLRAEQQNAIR--LARSRRLALINGGPG-TGKTYTIAR 142 Query: 452 LVMMAREQGREVQ--IIAADRRSQMNMKQD------ERLSGELITGRRQLLEGMAFT--- 500 L+ ++ +++ + A ++ M++ + L + + + Sbjct: 143 LIHAEQQADPKIRIALAAPTGKAAKRMEESLAAAGVQDLPAQTLHRLLGIGTDGQARYHM 202 Query: 501 ----PGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMKDAGVN 556 P +I+D+ LSL+ L+ A + ++++ + + D + Sbjct: 203 SRHLPHDLIIIDEASMLSLELAHALI-AATATDTRLILLGDADQLAAVEPGAILHDLSHH 261 Query: 557 TYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRS 616 + D +LA E + + ++ L R Sbjct: 262 PALQNHRITLRESQRFRADS--GIGQLAAILNGDDGQHGERLLEALAPYKKEQLPLFCRE 319 Query: 617 ELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTA 676 L +A S + + + + + A Sbjct: 320 S--DGLRLQTAGAKTSADSHPFPCVAGEGRGGGVKTSRSDNTVTATSFDAGQPPVTDKNA 377 Query: 677 QSHSLTLRDAQGETQVVRISSLDSSWSL 704 +L +++ +T + + + Sbjct: 378 GHKNLRSQNSDEKTIHWYPTPDANLYRA 405 >UniRef50_A8ZLV4 Helicase, RecD/TraA family n=18 Tax=Cyanobacteria RepID=A8ZLV4_ACAM1 Length = 753 Score = 241 bits (615), Expect = 2e-61, Method: Composition-based stats. Identities = 96/571 (16%), Positives = 179/571 (31%), Gaps = 62/571 (10%) Query: 736 QVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQM 795 + + E + V + + + A+K +++ G S + + +F Sbjct: 124 IIETHIERLIEVPGIAKKRVKLIQTALDSQKAIKEVMVFLQGHGVSTTYAVKIFKQYGDE 183 Query: 796 AMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISH 855 +++ T N R DV + A L P Sbjct: 184 SIETVTHNPY-RLATDVYGIGFVTADEIARSLGISPHSEYRYRSGL-------------- 228 Query: 856 QKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAE---GTGFTELGGEINAQI 912 +H+ E +L+ A A ++ I+A I Sbjct: 229 ------------LHVLSESAEEGHCYLPQPELIDRAVKRLALPDYQPKPDQVEYLIHAMI 276 Query: 913 KRGDLLYVDVAKGYGTGLL-VSRASYEAEKSILRHILE--------GKEAVMPLMERVPG 963 +L+ + T LL + ++AE + R +L+ E V ++R Sbjct: 277 SDAELIVERLTHEGSTKLLCYAPPFFQAEFHLSRRVLQLLASSLVVDNERVRAWLDRFMA 336 Query: 964 ELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGL 1023 + L+ Q+ A M R ++ G G GKT R +++ L ++ +V Sbjct: 337 QTDVSLSKQQQQAVEMAAS--QRVVILTGGPGTGKTFTTRTIVA----LWKAMGKDIVLA 390 Query: 1024 GPTHRAVGEMRS-AGVDAQTLASFLHDTQL--QQRSGETPDFSNTLFLLDESSMVGNTDM 1080 PT RA + G +A+T+ L + + ++DE+SM+ Sbjct: 391 SPTGRAAQRLSEVTGHEAKTIHRLLEFDPKTMKFQRNSDNPIPADAVVIDEASMLDLFLA 450 Query: 1081 ARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAV 1140 I + + GDTDQL ++ PG T + + E+ RQ Sbjct: 451 NSLIKAID-TNAQLLLVGDTDQLPSVGPGNVLLDLITSGRIPIIELTEVFRQAQASHIIR 509 Query: 1141 YSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQK------- 1193 + + S P GA PE+ V L E + Sbjct: 510 NAHRINQGQFPNLESVSPSPKTDCLWLGAPEPENGVQAIQELINDLLPELGFQPARDVQV 569 Query: 1194 --AMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKA 1251 M +GE + +A++ PE LI+ + + +N +V Sbjct: 570 LCPMTRGEVGTRKLNQVLQALINPPCPDKPELTRGGLILRVGDRVLQQVNDYNREVFNGD 629 Query: 1252 ----GELGKEQVMVPVLNTANIRDGELRRLS 1278 ++ E++ V V +L L+ Sbjct: 630 MGVIEDINLEEIEVTVHYAERSVSYDLADLN 660 Score = 205 bits (520), Expect = 2e-50, Method: Composition-based stats. Identities = 71/583 (12%), Positives = 154/583 (26%), Gaps = 83/583 (14%) Query: 293 DAADQRADLRTLTPGPASQDGPDVQQAVTQAI-AGLSERKVQFTYTDVLARTVGILPPEN 351 AD + G + + + + E +++ R V L + Sbjct: 201 GIGFVTADEIARSLGISPHSEYRYRSGLLHVLSESAEEGHCYLPQPELIDRAVKRLALPD 260 Query: 352 G--VIERARAGIDEAISREQLI--PLDREKG--------------LFTSGIHVLDELSVR 393 ++ I IS +LI L E S + S Sbjct: 261 YQPKPDQVEYLIHAMISDAELIVERLTHEGSTKLLCYAPPFFQAEFHLSRRVLQLLASSL 320 Query: 394 ALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELV 453 + + ++ + V + AV + A R ++ G G+ +V Sbjct: 321 VVDNERVRAWLDRFMAQTDVSLSKQQQQAVEMAASQR---VVILTGGPGTGKTFTTRTIV 377 Query: 454 MMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEG--------MAFTPGSTV 505 + + G+++ + + R+ + + + I + P V Sbjct: 378 ALWKAMGKDIVLASPTGRAAQRLSEVTGHEAKTIHRLLEFDPKTMKFQRNSDNPIPADAV 437 Query: 506 IVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR--TGTGSALMAMKDAGVNTYRWQGG 563 ++D+ L L +L+ + +L+ D+ Q G G+ L+ + +G Sbjct: 438 VIDEASMLDLFLANSLIKAIDTNAQLLLVGDTDQLPSVGPGNVLLDLITSGRIPIIELTE 497 Query: 564 EQRPATIISEPDRNVRYA--RLAGDFAASVKAGEESVAQVSGVRE--QAILTQAIRSELK 619 R A R + + S + + + E + + I L Sbjct: 498 VFRQAQASHIIRNAHRINQGQFPNLESVSPSPKTDCLWLGAPEPENGVQAIQELINDLLP 557 Query: 620 TQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSH 679 G P + L P M + TR ++ + + Sbjct: 558 ELGF--QPARDVQVLCP-------------------MTRGEVGTRKLNQVLQALINPPC- 595 Query: 680 SLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVAS 739 + + G+R+ V GD + Sbjct: 596 --------------------PDKPELTRGGLILRVGDRVLQQVNDYNREVFNGDMGVIED 635 Query: 740 VSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQ---MA 796 ++ + + V V ++ + + L + Q M Sbjct: 636 INLEEIEVTV--HYAERSVSYDLADLNEIGLAWAVTIHKSQGSEYPVVILPLYMQHYIML 693 Query: 797 MDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQ 839 N GL R+ + L + A + + + E+ Sbjct: 694 SRNLLYTGLTRAKKLAILVGPKNAISMAIRQIKDRQRYTLLER 736 Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats. Identities = 46/389 (11%), Positives = 106/389 (27%), Gaps = 26/389 (6%) Query: 1094 AVASGDTDQLQAIAPGQPFR----LQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVE 1149 + +G G+ F + ++ ++ + + V + + Sbjct: 359 VILTGGP------GTGKTFTTRTIVALWKAMGKDIVLASPTGRAAQRLSEVTGHEAKTIH 412 Query: 1150 RALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLY 1209 R L Q A + E S + + Sbjct: 413 RLLEFDPKTMKFQRNSDNPIPADAVVIDEASMLDLFLANSLIKAIDTNAQLLLVGDTDQL 472 Query: 1210 EAIVRDYTGRTPEAREQTLIVTHLNEDRR-VLNSMIHDVREKAGELGKEQVMVPVLNTAN 1268 ++ + I+ R+ + +I + G+ + V + Sbjct: 473 PSVGPGNVLLDLITSGRIPIIELTEVFRQAQASHIIRNAHRINQ--GQFPNLESVSPSPK 530 Query: 1269 IRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEG-------NTRLISP 1321 L + L++++ + D + G N L + Sbjct: 531 TDCLWLGAPEPENGVQAIQELINDLLPELGFQPARDVQVLCPMTRGEVGTRKLNQVLQAL 590 Query: 1322 REAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTR 1381 T + + GDR+ +D R + + ++ + + ++ R Sbjct: 591 INPPCPDKPELTRGGLILRVGDRVLQQVNDYNREVFNGDMGVIEDINLEEIEVTVHYAER 650 Query: 1382 EIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQ 1441 + I LA+A+T H +QG+ I +M Y L+R K+ Sbjct: 651 SVSY-DLADLNEIGLAWAVTIHKSQGSEYPVVI--LPLYMQHYIMLSRNLLYTGLTRAKK 707 Query: 1442 HVQVYTDNRQGWTDAIN--NAVQKGTAHD 1468 + + + + AI Q+ T + Sbjct: 708 -LAILVGPKNAISMAIRQIKDRQRYTLLE 735 >UniRef50_C7NFC4 TrwC relaxase n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NFC4_KYTSD Length = 1160 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 139/999 (13%), Positives = 280/999 (28%), Gaps = 151/999 (15%) Query: 11 GSAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGRLPDGADL---- 66 A YY DN + + G+G + D + ++ P + Sbjct: 31 SGADEYYLRADN---AIAEYVAFDGKGEVTAARS--LSPDEYEGWVDWHDPITGEPMGTP 85 Query: 67 SRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGD--KRLIDAHNQAVDFAVRQVEALASTR 124 + +G+ D+T +PKS+S+ A L + + L A A+ R + + TR Sbjct: 86 RKPAEGTKGSPLFCDMTTDSPKSLSVAAALHPEVSEALDQAQQDALGEIRRWLGQHSVTR 145 Query: 125 VMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDKVGKTG 184 V E V + + H TSR +P H H + G+W+ L + + K Sbjct: 146 VGPREAREIVPIEQMQVVGIGHKTSRAGDPHRHIHMQIGTRIWAAGKWRALDTAALFKQQ 205 Query: 185 FIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVEAFSGRSQTIR-- 242 + + +L E + G + V + E+ S RS I Sbjct: 206 GAIHAMGTAVIAA---HPELAETLSRHGLTLDPV-SGEVAELEPFNA-VMSKRSAQINRN 260 Query: 243 ------EAVGEDA--------SLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDI 288 E E + + + A R K+ D + + W Q L + G+D Sbjct: 261 LDHLEAEWQTEHPGETPGPVVTARMQGTAWAHQRPGKKPADLKNE-QWWQQELTDAGYDP 319 Query: 289 RAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILP 348 R + D VQ+ ++A+ + +T V I Sbjct: 320 ENL---------GRRAVQFSIALDALLVQEVASRALDRCAAGASAWTRHTVQEHVTRITT 370 Query: 349 PENG--VIERARA--GIDEAISREQL-------IPLDREKGLFTSGIHVLDELSVRALSR 397 E R + ++ E +P TS V E ++R Sbjct: 371 EAGVQAAPEELREFIAVATGLATEDCFSVLPPGVPTPEHVAHLTSLGVVAAETALRDQLT 430 Query: 398 DIMKQNRVTV----HPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELV 453 + + ++ G + A + +A P + + +G+ + + Sbjct: 431 ASIPEQEPERPDVTEAAQAAGLDEGQTLAAAAVASTDPLV--IVEDAAGSGKTTMLRTAI 488 Query: 454 MMAREQGREVQIIAADRRSQMNMKQDERLSGELI------TGRRQLLEG----------- 496 +A E GR +++A +R+ +++ + + G R +G Sbjct: 489 EVAAEHGRSTRVVAPTKRAAQIAQEELGIPATSVAALAYAHGWRWNADGVWTRLNRGDTD 548 Query: 497 -------------MAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGT 543 + G V+VD+ L LL A + V + + Sbjct: 549 PMTGGIYTGPPPEAVLSRGGRVVVDEVGMLDQDTAHALLTITAEASATVALVGDRAQLPA 608 Query: 544 ---GSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQ 600 G L TY + + +R GD + Sbjct: 609 VGRGGVLDMAAQIRGRTYDMSELHRFTDAEYAALTLAMRDRSSPGDVFDRLATMHLVTLH 668 Query: 601 VSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWN 660 + +T R Sbjct: 669 ADDDAAREHITDHARDG------------------------------------------- 685 Query: 661 PETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRV 720 + ++ +L R G + ++S ++ + + + G+ ++ Sbjct: 686 -------EAITVATNDEATALNERIRAGRVEAGKVSDT---VTVTGSDGLSIGAGDLIQT 735 Query: 721 TGKIPGLRVSGGDRLQVASVSEDAMTV----VVPGRAEPATLPVSDSPFTALKLENGWVE 776 + V+ + V V+ + TV V GR P T+ + + Sbjct: 736 RRNDSDVGVANRQQWIVQHVNSEDGTVYAREVGSGRKNPRTVALPVEYVGENAHLSYAAT 795 Query: 777 TPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVV 836 G + ++ ++++ G+ R RL+ ++ A Sbjct: 796 AYGVQGATVSSSHTALSEATSAAGVYVGMTRGRHTNRLHIVAEDMADARAQFIEAMKRDP 855 Query: 837 SEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAA 896 +++ A + E + + E + A + A F A Sbjct: 856 ADRGLDHATAQAAEAVRGFVADGPVRLVTEELARLDHEAEQAERAAERWE--QTAARFDA 913 Query: 897 EGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRA 935 + + A +++ + V T L Sbjct: 914 QRATHQAEDNQSAAVLRKAEDSSEQVRAEVATPLTTQAE 952 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 131/1014 (12%), Positives = 241/1014 (23%), Gaps = 135/1014 (13%) Query: 753 AEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDV 812 TL L+ N + ++ + + Q T + + Sbjct: 228 RHGLTLDPVSGEVAELEPFNAVMSKRSAQINRNLDHLEAEWQTEHPGETPGPVVTARMQG 287 Query: 813 RLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLAL 872 ++ + L + A+ + Q+ AL Sbjct: 288 TAWAHQRPGKKPADLKNEQWWQQELTDAGYDPENL-GRRAVQFSIALDALLVQEVASRAL 346 Query: 873 PVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEIN--------AQIKRGDLLYVDVAK 924 + A++ + E A +L V Sbjct: 347 DRCAAGASAWTRHTVQEHVTRITTEAGVQAAPEELREFIAVATGLATEDCFSVLPPGVPT 406 Query: 925 GYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERV-PGELMEKLTSGQRAATRMILET 983 L S AE ++ + P V L GQ A + + Sbjct: 407 PEHVAHLTSLGVVAAETALRDQLTASIPEQEPERPDVTEAAQAAGLDEGQTLAAA-AVAS 465 Query: 984 SDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA-GVDAQT 1042 +D +V+ AG GKTT R + + PT RA + G+ A + Sbjct: 466 TDPLVIVEDAAGSGKTTMLRTAIEV----AAEHGRSTRVVAPTKRAAQIAQEELGIPATS 521 Query: 1043 LASFLHDTQLQQR---------SGETPDFSNTL---------------FLLDESSMVGNT 1078 +A+ + + G+T + + ++DE M+ Sbjct: 522 VAALAYAHGWRWNADGVWTRLNRGDTDPMTGGIYTGPPPEAVLSRGGRVVVDEVGMLDQD 581 Query: 1079 DMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELRE 1138 + A GD QL A+ G + M E+ R T Sbjct: 582 TAHALLTITAEASATVALVGDRAQLPAVGRGGVL-DMAAQIRGRTYDMSELHRFTDA-EY 639 Query: 1139 AVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKG 1198 A +L RD + + + Sbjct: 640 AALTLAMRDRSSPGDVFDRLATMHLVTLHADDDAAREHI--------------------- 678 Query: 1199 EAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQ 1258 T AR+ I N++ LN I R +AG++ Sbjct: 679 ---------------------TDHARDGEAITVATNDEATALNERIRAGRVEAGKVSD-- 715 Query: 1259 VMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRL 1318 V V + + G + T D V + S+D + + G Sbjct: 716 -TVTVTGSDGLSIGAGDLIQTRRNDSDVGVANRQQWIVQHVNSEDGTVYAREVGSGRKNP 774 Query: 1319 ISPREAVAEGVTLYTPDTIRVGTG-DRMRFTKSDRERGYVANSVWTVTAVSGDSVT---- 1373 + V G + S ++ ++ T Sbjct: 775 RTVALPVEYVGENAHLSYAATAYGVQGATVSSSHTALSEATSAAGVYVGMTRGRHTNRLH 834 Query: 1374 -----LSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAG 1428 ++D + ++ A++ +D A AQ A +G Sbjct: 835 IVAEDMADARAQFIEAMKRDPADRGLDHA------TAQAAEAVRGFVADGP--------- 879 Query: 1429 FESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTA 1488 V++ T+ A + + + D A+R A Sbjct: 880 --------------VRLVTEELARLDHEAEQAERAAERWEQTAARFD-----AQRATHQA 920 Query: 1489 RELRDVAAGRAVLRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTT 1548 + + A R + + Y+ A + + + Sbjct: 921 EDNQSAAVLRKAEDSSEQVRAEVATPLTTQAETDGAAYLDAVADEAAARGRLATVGRFGR 980 Query: 1549 DDGNGLRGFSGEGRVKGSGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIA 1608 + E G N + L Q A +P VV Sbjct: 981 RRARIEHQAATERAQSLRGHVSGEWGTTPANPDRLPEWAGQVAATRAEADPRVTEVVETV 1040 Query: 1609 GEGRPWNPGAITGGRVWGDIPDNSVQPGAGNGEPVTAEVLAQRQAEEAIRRETERRADEI 1668 I R + V + + + R+ + RA Sbjct: 1041 DAATAGR--EIMRKRHRQERTALLVSEYGAEHAQAARYGMRRTTNPDRQARDAKNRAAAT 1098 Query: 1669 VRKMAENK--PDLPDGKTEQAVREIAGQERDRAAITEREAALPEGVLREPQRVR 1720 + E + P + + Q R+RAA ER+ P +R Sbjct: 1099 RAEADELRSLPITEAARLIETKHAAQEQARERAAQRERQLHDPFEHDLHRHELR 1152 Score = 82.4 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 88/614 (14%), Positives = 173/614 (28%), Gaps = 26/614 (4%) Query: 1147 DVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPM 1206 + + + L + P +V + Sbjct: 534 NADGVWTRLNRGDTDPMTGGIYTGPPPEAVLSRGGRVVVDEVGMLDQDTAHALLTITAEA 593 Query: 1207 TLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRV-LNSMIHDVREKAGELGKEQVMVPVLN 1265 + A+V D R L + R ++ + + L Sbjct: 594 SATVALVGDRAQLPAVGRGGVLDMAAQIRGRTYDMSELHRFTDAEYAALTLAMRDRSSPG 653 Query: 1266 TANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAV 1325 R + ++ A + + I+ E V Sbjct: 654 DVFDRLATMHLVTLHADDDAAREHITDHARDGEAITVATNDEATALNERIRAGRVEAGKV 713 Query: 1326 AEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTL------SDGQQ 1379 ++ VT+ D + +G GD ++ ++D + G W V V+ + T+ S + Sbjct: 714 SDTVTVTGSDGLSIGAGDLIQTRRNDSDVGVANRQQWIVQHVNSEDGTVYAREVGSGRKN 773 Query: 1380 TREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRM 1439 R + E ++ L+YA TA+G QGA+ + + + YV ++R Sbjct: 774 PRTVALPVEYVGENAHLSYAATAYGVQGATVSSSHTALSEATSAAG------VYVGMTRG 827 Query: 1440 KQ--HVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAG 1497 + + + ++ A+++ A + + A R F +R V Sbjct: 828 RHTNRLHIVAEDMADARAQFIEAMKRDPADRGLDHAT-AQAAEAVRGFVADGPVRLVTEE 886 Query: 1498 RAVLRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGF 1557 A L + R+ ++ A + N +A + +++ Sbjct: 887 LARLDHEAEQAERAAERWEQTAARF-DAQRATHQAEDNQSAAVLRKAEDSSEQVRAEVAT 945 Query: 1558 SGEGRVKGSGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDSG------VVVRIAGEG 1611 + + G A A+ LA + G R AR + + ++GE Sbjct: 946 PLTTQAETDGAAYLDAVADEAAARGRLATVGRFGRRRARIEHQAATERAQSLRGHVSGEW 1005 Query: 1612 --RPWNPGAITGGRVWGDIPDNSVQPGAGNGEPVTAEVLAQRQAEEAIRRETERRADEIV 1669 P NP + P A R+ R+ Sbjct: 1006 GTTPANPDRLPEWAGQVAATRAEADPRVTEVVETVDAATAGREIMRKRHRQERTALLVSE 1065 Query: 1670 RKMAENKPDLPDGKTEQAVREIAGQERDRAAITEREAALPEGVLREPQRVREAVREIARE 1729 + + A ++RAA T EA L + R + A + Sbjct: 1066 YGAEHAQAARYGMRRTTNPDRQARDAKNRAAATRAEADELRS-LPITEAARLIETKHAAQ 1124 Query: 1730 NLLQERLQQMERDM 1743 +ER Q ER + Sbjct: 1125 EQARERAAQRERQL 1138 >UniRef50_Q6MDD6 Putative exodeoxyribonuclease V n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MDD6_PARUW Length = 721 Score = 240 bits (611), Expect = 5e-61, Method: Composition-based stats. Identities = 89/671 (13%), Positives = 187/671 (27%), Gaps = 81/671 (12%) Query: 736 QVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQM 795 + + + + G + +++ +++ G S + + +F Sbjct: 112 IIEESPQRLLEIEGLGTKRVEKIQACWIEQKSIRDVMIFLQGHGVSPAFAQKIFKKYGSQ 171 Query: 796 AMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISH 855 ++ N + D+ A+K+ Sbjct: 172 SILKLKDNPYCLAR-DIFGVGFKTADTVAQKMGISKDSEQRIG----------------- 213 Query: 856 QKSALHTPAQQAIHLALPVVE-SKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKR 914 I L + + + + + L EA++ + + Sbjct: 214 ----------AGIEYVLSQLSGDGHVCYPVDEFLKEAETHLEVKADL--IEKRLEGLQSE 261 Query: 915 GDLLYVD-VAKGYGTGLLVSRASYEAEKSILRHILEGKEAV--------MPLMERVPGEL 965 ++ + +G + + + AE I R + K V +E V +L Sbjct: 262 ERIILAQLIHEGKKRDFIWIKPLFIAETGIARELKRLKNGVSTFRSINKEKAVEWVQAQL 321 Query: 966 MEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGP 1025 +L Q+ A + T + ++ G G GK+T A++ +L + +++ P Sbjct: 322 KIELAPNQKEAVAKAIST--KLHIITGGPGTGKSTITNAILQITAILTQ----KILLAAP 375 Query: 1026 THRAVGEMRS-AGVDAQTLASFLH---DTQLQQRSGETPDFSNTLFLLDESSMVGNTDMA 1081 T RA M A T+ S L + + L ++DE+SM+ M Sbjct: 376 TGRAAKRMSEITKRKASTIHSLLEYDFKSTGGFKRNRENPLDCDLIIIDEASMIDTFLMY 435 Query: 1082 RAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVY 1141 R + GD QL ++ PG T V +KEI RQ Sbjct: 436 SLLK-ALPDHTRVIFVGDIHQLPSVGPGNVLSDMITSLTISVTTLKEIFRQAAGSHIITN 494 Query: 1142 SLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAF 1201 + P + E ++E + + + Sbjct: 495 AHRVNKGM-------------FPSLYNGQNSDFFFIECQENEEVLNTIVKLVSQRLPNRY 541 Query: 1202 PDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMV 1261 P + + G + LN L K QV Sbjct: 542 GFNPNQDIQVLAPMKKGLIGTEHLNQSLQMILNPKEHALFRGGQ----------KFQVGD 591 Query: 1262 PVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISP 1321 V+ N E+ +L + + I +D + + + +++ Sbjct: 592 KVMQIRNDYQKEV------FNGDIGYILNIDSEEQQVLIQFEDKEVVYDYTDLDELILAY 645 Query: 1322 REAVAEGVTLYTPD-TIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQT 1380 +V + P + V T M ++ G V + ++ ++ + Sbjct: 646 AISVHKFQGSECPCVVMPVHTSHFMLLHRNLLYTGITRGKKLVVLVGTKKALAIAVKKDD 705 Query: 1381 REIRPGQEQAE 1391 + R Q Sbjct: 706 VQKRYTSLQNA 716 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 87/729 (11%), Positives = 197/729 (27%), Gaps = 113/729 (15%) Query: 167 QHNGEWKT--LSSDKV----GKTGFIENVYANQIA--------FGRLYREKLKEQVEALG 212 + NG WKT + + + ++ + G Y ++ + Sbjct: 50 RCNGNWKTHLIHGRQFEISSFRVEAPADILGIKKYLGSGLIKGIGPKYATRIVDIFGIDT 109 Query: 213 YETEVVGKHGMWEMPGVPVEAFSGRSQTIRE-AVGEDASLKSRDVA-------ALDTRKS 264 + + E+ G+ R + I+ + + + A + Sbjct: 110 LKIIEESPQRLLEIEGLGT----KRVEKIQACWIEQKSIRDVMIFLQGHGVSPAFAQKIF 165 Query: 265 KQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAI 324 K++ I + R + AD G + + + + Sbjct: 166 KKYGSQSILKLKDNPYCLA-----RDIFGVGFKTADTVAQKMGISKDSEQRIGAGIEYVL 220 Query: 325 AGLS-ERKVQFTYTDVLARTVGILPPENGVIERARAGI--DEAISREQLIPLDREKG--- 378 + LS + V + + L L + +IE+ G+ +E I QLI +++ Sbjct: 221 SQLSGDGHVCYPVDEFLKEAETHLEVKADLIEKRLEGLQSEERIILAQLIHEGKKRDFIW 280 Query: 379 ---LFTSGIHVLDELSVRALSRDI-----MKQNRVTVHPEKSVPRTAGYSDAVSVLAQDR 430 LF + + EL ++ V + + +AV+ + Sbjct: 281 IKPLFIAETGIARELKRLKNGVSTFRSINKEKAVEWVQAQLKIELAPNQKEAVAKAISTK 340 Query: 431 PSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGR 490 + G G+ ++ + +++ + A R+ M + + I Sbjct: 341 LHIIT---GGPGTGKSTITNAILQITAILTQKILLAAPTGRAAKRMSEITKRKASTIHSL 397 Query: 491 RQL---------LEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR- 540 + +I+D+ + +LL H + + D Q Sbjct: 398 LEYDFKSTGGFKRNRENPLDCDLIIIDEASMIDTFLMYSLLKALPDHTRVIFVGDIHQLP 457 Query: 541 -TGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVA 599 G G+ L M + + R A R + G F + Sbjct: 458 SVGPGNVLSDMITSLTISVTTLKEIFRQAAGSHIITNAHRVNK--GMFPSLYNGQNSDFF 515 Query: 600 QVSGVREQAILT---QAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVM 656 + + +L + + L + P + L+P M Sbjct: 516 FIECQENEEVLNTIVKLVSQRLPNRYG-FNPNQDIQVLAP-------------------M 555 Query: 657 EQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGE 716 ++ T ++ + + + H+L +G + + + ++ E V +G+ Sbjct: 556 KKGLIGTEHLNQSLQMILNPKEHAL----FRGGQKFQVGDKVMQIRNDYQKE---VFNGD 608 Query: 717 RLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVE 776 + ++ + V++ + +D L L Sbjct: 609 -----------------IGYILNIDSEEQQVLIQFEDKEVVYDYTD--LDELILAYAISV 649 Query: 777 TPGHSVSDSATVFASVTQMAM---DNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSF 833 V T M N G+ R + V L + A K Sbjct: 650 HKFQGSECPCVVMPVHTSHFMLLHRNLLYTGITRGKKLVVLVGTKKALAIAVKKDDVQKR 709 Query: 834 TVVSEQIKT 842 + Sbjct: 710 YTSLQNALM 718 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 17/140 (12%), Positives = 48/140 (34%), Gaps = 4/140 (2%) Query: 1333 TPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQ 1392 + GD++ ++D ++ + + + + + + +E+ Sbjct: 581 FRGGQKFQVGDKVMQIRNDYQKEVFNGDIGYILNIDSEEQQVLIQFEDKEVVY-DYTDLD 639 Query: 1393 HIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQG 1452 + LAYAI+ H QG+ + + ++ Y ++R K+ V + ++ Sbjct: 640 ELILAYAISVHKFQGSECPCV--VMPVHTSHFMLLHRNLLYTGITRGKKLVVLV-GTKKA 696 Query: 1453 WTDAINNAVQKGTAHDVFEP 1472 A+ + + Sbjct: 697 LAIAVKKDDVQKRYTSLQNA 716 >UniRef50_A3FG49 ORF16 n=1 Tax=Amycolatopsis benzoatilytica RepID=A3FG49_9PSEU Length = 1558 Score = 240 bits (611), Expect = 5e-61, Method: Composition-based stats. Identities = 137/849 (16%), Positives = 239/849 (28%), Gaps = 156/849 (18%) Query: 12 SAGNYYTDKDNYYVLGSMGERWAGRGAEQLGLQG--SVDKDVFTRLL-EGRLPDGADLSR 68 A Y+ G RW G G + LG++ + D ++ E + P+ + Sbjct: 47 DAAGYFLSAQ---QHGEAAGRWYGNGLDMLGMKAGSAATADDVRKVFGELKDPNSGEYLG 103 Query: 69 M----------------------------------QDGSNRHRPGYDLTFSAPKSVSMMA 94 + + YD TFS KSVS+ Sbjct: 104 RAPRQFKDYDARVAAAVKREPNATPERLKEIQDAARTDGRKAVAYYDFTFSPVKSVSVYY 163 Query: 95 -------MLGGDKRLIDAHNQAVDFAVRQVEAL-ASTRVMTDGQSE-------TVLTGNL 139 +++ AH +AVD A+ +E A R G++ L Sbjct: 164 TALVSAGAHEAADKVLKAHREAVDVALGYLEKHGAYVRTGYHGKTVNGRSVGKYERATGL 223 Query: 140 VMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDKVGKTGFIENVYANQIAFGRL 199 + F+H TSR EPQLH HA V N Q SD V + + + A Sbjct: 224 NVIKFDHSTSRANEPQLHCHAAVLNRVQTE-------SDGVIRALDAKGFRPIKEAVSVA 276 Query: 200 YREKLKEQV-EALGYETEVVGKHGMWEMPGVP---VEAFSGRSQTIREAVGED------- 248 Y L++++ LG E+ GV S R + E E Sbjct: 277 YERALEDKLTAELGVRFAQRPDGKAREILGVDPTLCTEASSRRAQVEERSAELIEAYVDR 336 Query: 249 --------ASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRAD 300 A +A LDTR++K + W D +AA + + Sbjct: 337 HGREPSAAARKAIAQMATLDTREAKGPEAGPQALRAWGDERAGRLADTLDQVEAAAAKIE 396 Query: 301 LRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAG 360 D D Q + A+ + + +T +++A + E A Sbjct: 397 REGHPDAKVMPDQRDRQAILRAAVEDVQAQYPTWTLGNLVAAVDRQVISLPCTPEERPAY 456 Query: 361 ID------------------------------EAISREQLIPLDREKGLFTSGIHVLDEL 390 I+ + +LI ++T+ H+ E Sbjct: 457 IEGMAREALAAGNDYGVLTLTAPDPVAVPTPLQRPDDGRLIYRPHMDEVYTTEKHLDTER 516 Query: 391 SVRALSRDIMKQNRVTVHPE------KSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAG 444 + +R E + T AV + + ++ G G G Sbjct: 517 RIVVGARQQTAPAISGPELEMLKVELSATTLTEDQRAAVLGIVSSGRAADVLIGPAG-TG 575 Query: 445 QRERVAELVMMA-REQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLL--------E 495 + VA L + G V +A +R+ + E L + + Sbjct: 576 KSYTVATLTQAWSQNTGGRVMGLATSQRATDVL-NSEGLDSINTSQFLKRFTPDETTGEA 634 Query: 496 GMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMK---- 551 PG +VD+ E + + ++L T ++ A ++ Sbjct: 635 RDQVRPGDLFVVDEAGMSGTDELARISALVEQGGGKLLYTGDHRQLAAVKAGGMLELLAN 694 Query: 552 ---DAGVNTYRWQGGEQRPATIISEP-------------------DRNVRYARLAGDFAA 589 + + R + I + A Sbjct: 695 DNGAYELESVRRFEADWEKQASIRLRVGDTSVLSEYDDRGRLRGGTMEEMREAAVRGYVA 754 Query: 590 SVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDM 649 G +S+ V + L+ IR++L G + EV A + Sbjct: 755 DTLEGLDSLLIVRSNDDATDLSAEIRAQLVELGKVD-SEVLTQARDGNLISVGDVIQARK 813 Query: 650 YRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEK 709 + ++ + + Y + V L A G T + S +D +L Sbjct: 814 NNYDIEVQGGRGMVVNREVYTVRGVD-DRGRLIAETADGATAYLPDSYVDQHVTLAYAST 872 Query: 710 MPVADGERL 718 A G + Sbjct: 873 KHAAQGRTV 881 Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats. Identities = 142/883 (16%), Positives = 253/883 (28%), Gaps = 112/883 (12%) Query: 910 AQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSIL--RHILEGKEAVMPLMERVPGEL-M 966 + G L+Y + + + + E+ I+ P +E + EL Sbjct: 489 QRPDDGRLIYRP----HMDEVYTTEKHLDTERRIVVGARQQTAPAISGPELEMLKVELSA 544 Query: 967 EKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPT 1026 LT QRAA I+ + V+ G AG GK+ + A ++ RV+GL + Sbjct: 545 TTLTEDQRAAVLGIVSSGRAADVLIGPAGTGKSYTVATLTQAW---SQNTGGRVMGLATS 601 Query: 1027 HRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPD--FSNTLFLLDESSMVGNTDMARAY 1084 RA + S G+D+ + FL + +GE D LF++DE+ M G ++AR Sbjct: 602 QRATDVLNSEGLDSINTSQFLKRFTPDETTGEARDQVRPGDLFVVDEAGMSGTDELARIS 661 Query: 1085 ALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLI 1144 AL+ GGG+ + +GD QL A+ G L + A ++ + R + + + Sbjct: 662 ALVEQGGGKLLYTGDHRQLAAVKAGGMLELLANDNGA--YELESVRRFEADWEKQASIRL 719 Query: 1145 NRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDV 1204 LS + +G Sbjct: 720 RVGDTSVLSEYDD---------------------------------------RGRLRGGT 740 Query: 1205 PMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVL 1264 + EA VR Y T E + ++ N+D L++ I + G++ E + Sbjct: 741 MEEMREAAVRGYVADTLEGLDSL-LIVRSNDDATDLSAEIRAQLVELGKVDSEVLTQARD 799 Query: 1265 N---TANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISP 1321 + + E ++V+ + + G+ LI L Sbjct: 800 GNLISVGDVIQARKNNYDIEVQGGRGMVVNREVYTVRGVDDRGRLIAETADGATAYLPDS 859 Query: 1322 REAVA----EGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDG 1377 T + V TG + RG N+ + VT D Sbjct: 860 YVDQHVTLAYASTKHAAQGRTVDTGHTLSPDYVSMTRGKQCNTAYLVTERPADEH--EPE 917 Query: 1378 QQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIAL-----EGTEGNRKLMAGFESA 1432 + + D +Q A A G + + E A Sbjct: 918 RLAVTPVAAMAAELESFDP--------SQAAELEHRAAAEEGRSLSWIGTQWDLVSGEWA 969 Query: 1433 -YVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKP------DREVMNAERLF 1485 Y R + +A G D+ + A Sbjct: 970 EY----RHSDTLAGLLGEAGEPVEAAQAEHGWGRLMRTLREAELAGHDVDKVLTEAVHAR 1025 Query: 1486 STARELRDVAAGRAVLRQAGLAG------GDSPARFIAPGRKYPQ-------PYVALPAF 1532 R +R+A +AP + P +A Sbjct: 1026 GFGDAESVTDVLRYRVRKATAERVPEQQVDARDWTTLAPPTEGPVGQWLQEMAVLASDRQ 1085 Query: 1533 DRNGKSAGIWLNPLTTDDGNGLRGFSGEGRVKGSGDAQFVALQGSRNGESLLADNMQDGV 1592 G+ L + G+ + R ++ D G Sbjct: 1086 HALGEQVADELPQWAVEHLGTPPAEPGQREEWVRR---AGVVAAYRELSAVPEDQASIGA 1142 Query: 1593 RIARDNPDSGVVVRIAGEGRPWNPGAITGGRVWGDIPDNSVQPGAGNGEPVTAEVLAQRQ 1652 AR+ + + A A+ A V + Q Sbjct: 1143 APAREQEFRRALWQQAHAALGRPVDALDLATASDAELREMQARWTREQTWAPAYVADEMQ 1202 Query: 1653 AEEAIRRETERRADEIVRKMAENKPDLPDGKTEQAVREIAGQERDRAAITEREAALPEGV 1712 + + A ++ P+ + +A ++ ER A TER L Sbjct: 1203 RNYTVAEGYRQDAAIYAAQLETLTEGTPEYEATRA--DVERVERLAADFTERSRQLEAI- 1259 Query: 1713 LREPQRVREAVREIARENLLQERLQ--QMERDMVRDLQKEKTL 1753 + R+ E + ++++L ++ER V D E+ Sbjct: 1260 ----HQARQQWHETTEDARVRDQLAREELERRGVADQPAEQAR 1298 Score = 72.3 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 64/456 (14%), Positives = 114/456 (25%), Gaps = 51/456 (11%) Query: 1334 PDTIRVGTGDRMRFTKSDRERGYV-------ANSVWTVTAVSGDSVTLSDGQQTREIRPG 1386 D + GD ++ K++ + V+TV V +++ Sbjct: 798 RDGNLISVGDVIQARKNNYDIEVQGGRGMVVNREVYTVRGVDDRGRLIAETADGATAYLP 857 Query: 1387 QEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVY 1446 +QH+ LAYA T H AQG + L YV+++R KQ Y Sbjct: 858 DSYVDQHVTLAYASTKHAAQGRTVDTGHTLSPD-------------YVSMTRGKQCNTAY 904 Query: 1447 ------TDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELR------DV 1494 D + A+ + F+P E+ R L D+ Sbjct: 905 LVTERPADEHEPERLAVTPVAAMAAELESFDPSQAAEL-EHRAAAEEGRSLSWIGTQWDL 963 Query: 1495 AAGRAVLRQAGLAGGDSPARFIAPGRKYPQPYV------ALPAFDRNGKSAGIWLNPLTT 1548 +G + P + L + G L Sbjct: 964 VSGEWAEYRHSDTLAGLLGEAGEPVEAAQAEHGWGRLMRTLREAELAGHDVDKVLTEAVH 1023 Query: 1549 DDGNGLRGFSGEGRVKGSGDAQFVALQ----------GSRNGESLLADNMQDGVRIARDN 1598 G G + A + + + + Sbjct: 1024 ARGFGDAESVTDVLRYRVRKATAERVPEQQVDARDWTTLAPPTEGPVGQWLQEMAVLASD 1083 Query: 1599 PDSGVVVRIAGEGRPWNPGAITGGRVWGDIPDNSVQPGAGNGEPVTAEVLAQRQAEEAIR 1658 + ++A E W + + V+ + + QA Sbjct: 1084 RQHALGEQVADELPQWAVEHLGTPPAEPGQREEWVRRAGVVAAYRELSAVPEDQASIGAA 1143 Query: 1659 RETERRADEIVRKMAENKPDLPDGKTEQAVREIAGQERDRAAITEREAALPEGVLREPQR 1718 E+ + + A P + A A +A T + P V E QR Sbjct: 1144 PAREQEFRRALWQQAHAALGRPVDALDLATASDAELREMQARWTREQTWAPAYVADEMQR 1203 Query: 1719 VREAVREIARENLLQERLQQMERDMVRDLQKEKTLG 1754 ++ + Q+E + E T Sbjct: 1204 NYTVAEGYRQDAAIYA--AQLETLTEGTPEYEATRA 1237 >UniRef50_Q04YR4 Exodeoxyribonuclease V, alpha subunit n=4 Tax=Leptospira RepID=Q04YR4_LEPBL Length = 616 Score = 239 bits (608), Expect = 1e-60, Method: Composition-based stats. Identities = 84/592 (14%), Positives = 173/592 (29%), Gaps = 95/592 (16%) Query: 920 VDVAKGYGTGLLVSRASYEAEKSILRHILEG-KEAVMPLMERVPGELM--------EKLT 970 + V K + ++ ++ + + E + V P ++R E + L Sbjct: 72 LVVDKFENQEWVYFEKTHRSKTDLESLLKERIQNDVPPKVDRHRAEKILKNLESKSFPLK 131 Query: 971 SGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPE-SERPRVVGLGPTHRA 1029 Q L +S F +V G G GKTT ++ +N L + + + PT RA Sbjct: 132 EAQVKTILSCLNSS--FHIVSGGPGTGKTTVVAFLLEILNQLGQLPSPEEIALVAPTGRA 189 Query: 1030 VGEMRSAGVD---------------AQTLASFL--HDTQLQQRSGETPDFSNTLFLLDES 1072 + + + QT+ L + + L ++DE Sbjct: 190 AQRLTESIQENLKKISEMKGSDFLRGQTVHGLLSYKSSLGGFYYNRERYLPHRLIIVDEV 249 Query: 1073 SMVGNTDMARAYALIAAGGG--------RAVASGDTDQLQAIAPGQPFRL----QQTRSA 1120 SMV M + I R + GD QL ++ G +++ A Sbjct: 250 SMVDLNLMLSLWNAIPRDTKKDDRKIPLRFILIGDPHQLPSVEKGAVLSDFLSVLESKKA 309 Query: 1121 ADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFS 1180 + ++ RQ +V + + E + + S + + Sbjct: 310 NFASRLEGSNRQK----------SKGNVSKIVVLAEEILGYSPENLNLGTKIDDSFPKTT 359 Query: 1181 HSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVL 1240 E E++ + ++ E + + +T + I T +D L Sbjct: 360 TIGENSKYESEVVWLQNPANKTSDHLSRDEVVEKLWTEI--FHPGISKIGTWKVKDSFDL 417 Query: 1241 NSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGI 1300 N ++ + EL++ + N Y + I Sbjct: 418 NEAGFILKFQE---------------------ELKKFRCLT-------VFRNGYWGVEAI 449 Query: 1301 SKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANS 1360 + QD R+ G + T++D+ R Sbjct: 450 QTKIMNLAAQDL-------FHRKDQKPDFFAKRLSKRLYFIGLPILITQNDKNRKLFNGD 502 Query: 1361 VWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTE 1420 + V + + ++ P + A+ ++ H +QG+ + Sbjct: 503 IGIVLRMESTGELRAVFPIEGKLLPFALDTLPKHEPAFVMSIHKSQGSEYDTILIYIPDH 562 Query: 1421 G------NRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTA 1466 + + Y ++R K V + N + W I N+ ++ T Sbjct: 563 PESQEKERSHRLLNRQILYTGITRAKNQVIL-AGNPKTWEIGIANSQKRNTG 613 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 68/580 (11%), Positives = 157/580 (27%), Gaps = 94/580 (16%) Query: 316 VQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDR 375 + + + + + E + + + PP +D+ ++E + Sbjct: 37 LLEILNSIWSSMEEGSLCVPVKKEWRDVLKLKPPGLV--------VDKFENQEWVYFEKT 88 Query: 376 EKGLFTSGIHVLDEL---SVRALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPS 432 + T +L E V + + KS P V + S Sbjct: 89 HRSK-TDLESLLKERIQNDVPPKVDRHRAEKILKNLESKSFPLKEAQ---VKTILSCLNS 144 Query: 433 LAIVSGQGGAAGQRERVAELVMMAREQGR-----EVQIIAADRRSQMNMKQDER------ 481 + G G+ VA L+ + + G+ E+ ++A R+ + + + Sbjct: 145 SFHIVSGGPGTGKTTVVAFLLEILNQLGQLPSPEEIALVAPTGRAAQRLTESIQENLKKI 204 Query: 482 --------LSGELITGRRQL--------LEGMAFTPGSTVIVDQGEKLSLKETLTLLDGA 525 L G+ + G + P +IVD+ + L L+L + Sbjct: 205 SEMKGSDFLRGQTVHGLLSYKSSLGGFYYNRERYLPHRLIIVDEVSMVDLNLMLSLWNAI 264 Query: 526 ARHNVQ---------VLITDSGQRTGT--GSALMA----MKDAGVNTYRWQGGEQRPATI 570 R + +LI D Q G+ L ++ N G R + Sbjct: 265 PRDTKKDDRKIPLRFILIGDPHQLPSVEKGAVLSDFLSVLESKKANFASRLEGSNRQKSK 324 Query: 571 ISEPDRNVRYARL-------AGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGV 623 + V + + ++ + ++ + KT Sbjct: 325 GNVSKIVVLAEEILGYSPENLNLGTKIDDSFPKTTTIGENSKYESEVVWLQNPANKTSDH 384 Query: 624 LGLPEVTMTALSPVWL-------DSRSRYLRDMYRPGMVMEQWNPETR-------SHDRY 669 L EV + ++ + + D+ G +++ + + + Sbjct: 385 LSRDEVVEKLWTEIFHPGISKIGTWKVKDSFDLNEAGFILKFQEELKKFRCLTVFRNGYW 444 Query: 670 VIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRV 729 ++ + + +L +D + + R K G + +T ++ Sbjct: 445 GVEAIQTKIMNLAAQD------LFHRKDQKPDFFAKRLSKRLYFIGLPILITQNDKNRKL 498 Query: 730 SGGDRLQVASVSEDA-MTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATV 788 GD V + + V P + + P ++ G Sbjct: 499 FNGDIGIVLRMESTGELRAVFPIEGKLLPFALDTLPKHEPAFVMSIHKSQGSEYDTILIY 558 Query: 789 FASVT---------QMAMDNATLNGLARSGRDVRLYSSLD 819 ++ G+ R+ V L + Sbjct: 559 IPDHPESQEKERSHRLLNRQILYTGITRAKNQVILAGNPK 598 >UniRef50_Q30PF5 ATPase n=2 Tax=Campylobacterales RepID=Q30PF5_SULDN Length = 745 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 77/596 (12%), Positives = 173/596 (29%), Gaps = 79/596 (13%) Query: 861 HTPAQQAIHLALPVVESKK--LAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLL 918 A+ L ++ + L E + ++ G ++ Sbjct: 204 ENRISSAMDYVLLNYCEQQGNSCVAKEILFFELDELLTFSDKSYLYEASLVERVSEGSIV 263 Query: 919 YVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATR 978 + + L + E R ++ E KL Q+ A + Sbjct: 264 LMKNERVSPARLYDAEKYLYDEFK--RRAKLDNGGFTKDLDLFLSEHDLKLGDEQKEALK 321 Query: 979 MILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA-G 1037 I E S + GYAG GK+T R+++ +N + ++ + A + G Sbjct: 322 KINEGSS-ILFLVGYAGTGKSTTSRSILDLLNTKYDK--KEIITCALSGIASQRIADTTG 378 Query: 1038 VDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVAS 1097 ++ T+ S L + + F ++ L+DE+SM+ ++ AR ++ + Sbjct: 379 YESATIQSLLVKFEERDE------FPYSVVLIDEASMINSSLFARLVRKVSKS-ALLIVV 431 Query: 1098 GDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLES 1157 GD QL I G T A + + +I RQ+ + +A+ + N + + Sbjct: 432 GDDAQLPPIGAGNVLSDVLTLCLAPIVKLTKIYRQSED--KAITVIANDIRLGVVPEYKR 489 Query: 1158 VKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYT 1217 + + ++ + E ++ + E+I + Sbjct: 490 EYEDFEFVDVSMQNYYALKNQLTQAELSSQREENSAQIVAVI-----AHKVVESIEKARY 544 Query: 1218 GRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRL 1277 + + ++ LN K G LG + + + N Sbjct: 545 RLSNKQIKE------------YLNYFQVITPMKGGTLGSNNLNIVLQN------------ 580 Query: 1278 STWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTI 1337 + + + + + + + Sbjct: 581 --YFNPNPKKCVKKG-------------GVEFRLMDKVVHTKNENMTSWSSEGFKNSED- 624 Query: 1338 RVGTGDRMRFTKSDRERGYVANSVWTVTAV--SGDSVTLSDGQQTREIRPGQEQAEQHID 1395 +R + + + + + + E+ H+ Sbjct: 625 -------------SAQRRIFNGMSGLLFKIEEDDEQAFVFYPNEDVVVVYEYEELRSHLM 671 Query: 1396 LAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQ 1451 L+YA+T H QG I + + +M + Y A++R K + ++ Sbjct: 672 LSYALTIHKVQGMEYD--IVVIPMSFSHYIMHNTKLIYTAVTRAKHKCILVGESMA 725 Score = 167 bits (421), Expect = 5e-39, Method: Composition-based stats. Identities = 73/604 (12%), Positives = 181/604 (29%), Gaps = 33/604 (5%) Query: 242 REAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADL 301 +GE + A L T + E +K + + + +RAD Sbjct: 138 MREIGEFLTPYDVTPAFLTTIA-----TAMRDVEEPCAKIKNNPYILTSINSIGFKRADE 192 Query: 302 RTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYT-DVLARTVGILPPENGVIERARAG 360 L G D + A+ + E++ ++L + L + A Sbjct: 193 LALKMGVKKDDENRISSAMDYVLLNYCEQQGNSCVAKEILFFELDELLTFSDKSYLYEAS 252 Query: 361 IDEAISREQLIPLDREK----GLFTSGIHVLDELSVRALSRDIMKQNRVTVH-PEKSVPR 415 + E +S ++ + E+ L+ + ++ DE RA + + + E + Sbjct: 253 LVERVSEGSIVLMKNERVSPARLYDAEKYLYDEFKRRAKLDNGGFTKDLDLFLSEHDLKL 312 Query: 416 TAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQ--GREVQIIAADRRSQ 473 +A+ + + S+ + G G G+ ++ + + +E+ A + Sbjct: 313 GDEQKEALKKINEGS-SILFLVGYAG-TGKSTTSRSILDLLNTKYDKKEIITCALSGIAS 370 Query: 474 MNMKQDERLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVL 533 + I E P S V++D+ ++ L+ ++ + ++ Sbjct: 371 QRIADTTGYESATIQSLLVKFEERDEFPYSVVLIDEASMINSSLFARLVRKVSKSALLIV 430 Query: 534 ITDSGQR--TGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYAR-LAGDFAAS 590 + D Q G G+ L + + R + + + ++ Sbjct: 431 VGDDAQLPPIGAGNVLSDVLTLCLAPIVKLTKIYRQSEDKAITVIANDIRLGVVPEY--K 488 Query: 591 VKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMY 650 + + VS A+ Q ++EL +Q ++ + ++ ++S + Sbjct: 489 REYEDFEFVDVSMQNYYALKNQLTQAELSSQREENSAQI-VAVIAHKVVESIEK--ARYR 545 Query: 651 RPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSL------ 704 ++++ + + + + ++ L++ + + L Sbjct: 546 LSNKQIKEYLNYFQVITPMKGGTLGSNNLNIVLQNYFNPNPKKCVKKGGVEFRLMDKVVH 605 Query: 705 FRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTV-VVPGRAEPATLPVSDS 763 + E M E + + R+ G + + ED V + + + Sbjct: 606 TKNENMTSWSSEGFKNSEDSAQRRIFNGMSGLLFKIEEDDEQAFVFYPNEDVVVVYEYEE 665 Query: 764 PFTALKLENGWVETPGHSVSDSATVFA---SVTQMAMDNATLNGLARSGRDVRLYSSLDE 820 + L L + V S M + R+ L Sbjct: 666 LRSHLMLSYALTIHKVQGMEYDIVVIPMSFSHYIMHNTKLIYTAVTRAKHKCILVGESMA 725 Query: 821 TRTA 824 +A Sbjct: 726 FESA 729 >UniRef50_Q6FF15 Exonuclease V, alpha subunit n=11 Tax=Acinetobacter RepID=Q6FF15_ACIAD Length = 592 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 84/647 (12%), Positives = 182/647 (28%), Gaps = 94/647 (14%) Query: 844 AGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTE 903 + ++ + L S ++ + L+ + + + Sbjct: 1 MDKQNISKDTDLAWLETWSKYLVQTPFNLGERNSAQITAMLQALIEASVQGDSGLVVSSS 60 Query: 904 LGGEINAQIKRGDLLYVDVAK-GYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVP 962 + E+ + VA Y LL + E+ + ++ + V+P +E +P Sbjct: 61 IVAELGNYVLDEAQAQTQVAPMIYDGELLALYRYWMLEQRLAIQVVRLSQQVIPPVEVMP 120 Query: 963 GELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVG 1022 + Q+AA M+ F+++ G G GKT +++ +N + R+ Sbjct: 121 HLDLLT-DPHQQAAMSMVAT--QAFSLITGGPGTGKTYTLARIIAVLNQAIPN--IRIAM 175 Query: 1023 LGPTHRAVGEMRSAGVDA---------------------QTLASFLHDTQLQQ-RSGETP 1060 PT +A M+ A + QTL L Q R Sbjct: 176 AAPTGKAAQRMQEALQASFNDEKLTASGLLSHELKQQTTQTLHRLLGLGHQQLPRFHAKQ 235 Query: 1061 DFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSA 1120 + ++DE+SM+ A G R + GD +QL ++ G Q Sbjct: 236 PLPYDVIVVDEASMLDLKL-ATLLFEAVPAGCRLILLGDANQLASVDVGSVLADLQQ--- 291 Query: 1121 ADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFS 1180 V +++ R + + + L+ W P+ + EF Sbjct: 292 --VEALEQNRVNLVTSRRFREGAKIGEFAQFIQCLDVT-----------WDPQQILHEFE 338 Query: 1181 HSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVL 1240 H A + + + +Y + L Sbjct: 339 HQIAVPQALQPVSLLHDRDDMVQL----------EYL--------------PPKVNLEHL 374 Query: 1241 NSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGI 1300 + + ++ + + A + + + Y + I Sbjct: 375 TPYYQKLMQGFETFAQQLKHYRLHDYAESEVAAVIQAF-------------DDYRILVAI 421 Query: 1301 SKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANS 1360 D + + L + Y + + D + G Sbjct: 422 RFGDFGLEHINKMVEQWLTQYL-GILPVGGWYIGRPVMMTYNDY--------QLGLSNGD 472 Query: 1361 VWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTE 1420 + + + + ++I A+A+T H +QG+ + Sbjct: 473 IGICFRHRTQYDQFEVYFPSLDKWIAANRLPKNIQTAFALTIHKSQGSEFRHTAIVFDHM 532 Query: 1421 GNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAH 1467 + + E Y A++R KQ V + D + ++ + + Sbjct: 533 AQK--VLSQELIYTAITRAKQAVSLLVD-QDALLQSLIIRTTRKSGL 576 Score = 147 bits (369), Expect = 5e-33, Method: Composition-based stats. Identities = 73/523 (13%), Positives = 158/523 (30%), Gaps = 64/523 (12%) Query: 345 GILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNR 404 G++ + V E +DEA ++ Q+ P+ + L + + E + + +Q Sbjct: 54 GLVVSSSIVAELGNYVLDEAQAQTQVAPMIYDGELLALYRYWMLEQRLAIQVVRLSQQVI 113 Query: 405 VTVHPEKSVPR--TAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQ--G 460 V + A+S++A SL G G+ +A ++ + + Sbjct: 114 PPVEVMPHLDLLTDPHQQAAMSMVATQAFSLIT---GGPGTGKTYTLARIIAVLNQAIPN 170 Query: 461 REVQIIAADRRSQMNMKQDERLS--------------------GELITGRRQL------- 493 + + A ++ M++ + S + + L Sbjct: 171 IRIAMAAPTGKAAQRMQEALQASFNDEKLTASGLLSHELKQQTTQTLHRLLGLGHQQLPR 230 Query: 494 LEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMKDA 553 P ++VD+ L LK TLL A ++++ + + + D Sbjct: 231 FHAKQPLPYDVIVVDEASMLDLK-LATLLFEAVPAGCRLILLGDANQLASVDVGSVLAD- 288 Query: 554 GVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESV--AQVSGVREQAILT 611 Q + R R G+FA ++ + + Q+ E I Sbjct: 289 -----LQQVEALEQNRVNLVTSRRFREGAKIGEFAQFIQCLDVTWDPQQILHEFEHQI-- 341 Query: 612 QAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVI 671 A+ L+ +L + + L + +L Y+ +M+ + + Y + Sbjct: 342 -AVPQALQPVSLLHDRDDMVQ-LEYLPPKVNLEHLTPYYQK--LMQGFETFAQQLKHYRL 397 Query: 672 DRVTA----------QSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMP---VADGERL 718 + + + G+ + I+ + W +P G + Sbjct: 398 HDYAESEVAAVIQAFDDYRILVAIRFGDFGLEHINKMVEQWLTQYLGILPVGGWYIGRPV 457 Query: 719 RVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFT-ALKLENGWVET 777 +T L +S GD V + + + P ++ Sbjct: 458 MMTYNDYQLGLSNGDIGICFRHRTQYDQFEVYFPSLDKWIAANRLPKNIQTAFALTIHKS 517 Query: 778 PGHSVSDSATVFASVTQMAMDNAT-LNGLARSGRDVRLYSSLD 819 G +A VF + Q + + R+ + V L D Sbjct: 518 QGSEFRHTAIVFDHMAQKVLSQELIYTAITRAKQAVSLLVDQD 560 >UniRef50_C7RK95 Helicase, RecD/TraA family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RK95_9PROT Length = 752 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 105/669 (15%), Positives = 202/669 (30%), Gaps = 82/669 (12%) Query: 736 QVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQM 795 + E + G + + + ++ ++ G S + + +F + Q Sbjct: 120 VIEQSPERLREIPGIGAVRASRITAGWADQKIIRGIMVFLHAHGVSTARAVRIFKTYGQG 179 Query: 796 AMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISH 855 A+D N R +D+R L A+K+ + Sbjct: 180 AVDVVRENPY-RLAQDIRGIGFLSADTIAQKVGIAKDSPLR------------------- 219 Query: 856 QKSALHTPAQQAIHLALPVVE-SKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKR 914 AQ I AL +L+ A + + I +I Sbjct: 220 --------AQAGISYALTEASAQGHCGLPYAELVPLAVKLLD--IPESIIETAIAQEIAD 269 Query: 915 GDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEG--------KEAVMPLMERVPGELM 966 L+ V G + Y AE+S+ + A + V +L Sbjct: 270 EVLVPDTV---EGQPSVFLAPLYYAEQSLAAQVRRLTTAASTLPDFAADKAIPWVEQKLA 326 Query: 967 EKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPT 1026 +L Q+ A R+ L + V+ G GVGKTT ++++ +++ + + + PT Sbjct: 327 IELADSQKEAIRLALSA--KLLVITGGPGVGKTTLVNSILTIMSV----KGVKPLLCAPT 380 Query: 1027 HRAVGEMRS-AGVDAQTLASFLHDTQ--LQQRSGETPDFSNTLFLLDESSMVGNTDMARA 1083 RA + G++A+T+ L Q + + + DE SM+ + Sbjct: 381 GRAAKRLGESTGLEAKTIHRLLEVNPLNGQFKRNADNPLECDVLIADECSMIDVPLANQL 440 Query: 1084 YALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREA-VYS 1142 + A + GD DQL ++ PGQ + V + E+ RQ R Sbjct: 441 LKAV-ATSTVMILVGDVDQLPSVGPGQFLADLIDSGSVPVIRLTEVFRQAASSRIVRSAH 499 Query: 1143 LINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFP 1202 INR V +L G + E +V + ++ Sbjct: 500 QINRGVFPSLPGKGEASDFYLVAAEEPEVIAQTVVDLVQTR------------------- 540 Query: 1203 DVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVP 1262 +P + VRD P R T R +N + GE ++ Sbjct: 541 -LPRKFHVDPVRDIQVLCPMNRGIT--------GARGINQALQAALNPPGEHSVDKFGNR 591 Query: 1263 VLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPR 1322 + E V + ++ D ++T E + ++ Sbjct: 592 FSVGDKVMQIENNYDRDVFNGDIGFVTGIDRDDEELAVTFDGRVVTYPFGELDELVLCYA 651 Query: 1323 EAVAEGVTLYTP-DTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTR 1381 + + P + + T M ++ G V ++ ++ + Sbjct: 652 TTIHKAQGSEYPVVVMPISTQHYMMLKRNLIYTGITRGKTLVVLVGQKRALAMAVKGKEV 711 Query: 1382 EIRPGQEQA 1390 E R + + Sbjct: 712 ERRWSKLKE 720 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 96/696 (13%), Positives = 186/696 (26%), Gaps = 94/696 (13%) Query: 192 NQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVEAFSGRS---------QTIR 242 G +Y KL + A ++ + E+PG+ S + + I Sbjct: 97 MVRGIGPIYAGKLVKSFGAAVFDVIEQSPERLREIPGIGAVRASRITAGWADQKIIRGIM 156 Query: 243 EAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLR 302 + +R V T + D R AD Sbjct: 157 VFLHAHGVSTARAVRIFKTYGQGAVDVV-------RENPYRLAQD---IRGIGFLSADTI 206 Query: 303 TLTPGPASQDGPDVQQAVTQAI-AGLSERKVQFTYTDVLARTVGILPPENGVIERARAGI 361 G A Q ++ A+ ++ Y +++ V +L +IE I Sbjct: 207 AQKVGIAKDSPLRAQAGISYALTEASAQGHCGLPYAELVPLAVKLLDIPESIIE---TAI 263 Query: 362 DEAISREQLIPLDREKG-------LFTSGIHVLDELSVRALSRDIM-----KQNRVTVHP 409 + I+ E L+P E L+ + + ++ + + + V Sbjct: 264 AQEIADEVLVPDTVEGQPSVFLAPLYYAEQSLAAQVRRLTTAASTLPDFAADKAIPWVEQ 323 Query: 410 EKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAAD 469 + ++ +A+ + + +V G G+ V ++ + +G + + A Sbjct: 324 KLAIELADSQKEAIRLALSAK---LLVITGGPGVGKTTLVNSILTIMSVKGVKPLLCAPT 380 Query: 470 RRSQMNMKQDERLSGELITGRRQLLE-GMAFTPG-------STVIVDQGEKLSLKETLTL 521 R+ + + L + I ++ F +I D+ + + L Sbjct: 381 GRAAKRLGESTGLEAKTIHRLLEVNPLNGQFKRNADNPLECDVLIADECSMIDVPLANQL 440 Query: 522 LDGAARHNVQVLITDSGQR--TGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVR 579 L A V +L+ D Q G G L + D+G R A + Sbjct: 441 LKAVATSTVMILVGDVDQLPSVGPGQFLADLIDSGSVPVIRLTEVFRQAASSRIVRSAHQ 500 Query: 580 YARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWL 639 R F + GE S + E ++ Q + ++T+ Sbjct: 501 INRGV--FPSLPGKGEASDFYLVAAEEPEVIAQTVVDLVQTR------------------ 540 Query: 640 DSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLD 699 ++ D R V+ + + + + Sbjct: 541 -LPRKFHVDPVRDIQVL---------------CPMNRGITGARGINQALQAALNPPGEHS 584 Query: 700 SSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLP 759 + G+++ V GD V + D + V T P Sbjct: 585 VDKF-----GNRFSVGDKVMQIENNYDRDVFNGDIGFVTGIDRDDEELAVTFDGRVVTYP 639 Query: 760 VSDSPFTALKLENGWVETPGHSVSDSATVFASVTQ---MAMDNATLNGLARSGRDVRLYS 816 L L V TQ M N G+ R V L Sbjct: 640 --FGELDELVLCYATTIHKAQGSEYPVVVMPISTQHYMMLKRNLIYTGITRGKTLVVLVG 697 Query: 817 SLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETA 852 A K ++ + G+ S + Sbjct: 698 QKRALAMAVKGKEVERRWSKLKERLSMPGKCSCDVG 733 Score = 112 bits (279), Expect = 2e-22, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 47/120 (39%), Gaps = 4/120 (3%) Query: 1338 RVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLA 1397 R GD++ +++ +R + VT + D L+ R + + ++ + L Sbjct: 591 RFSVGDKVMQIENNYDRDVFNGDIGFVTGIDRDDEELAVTFDGRVVTYPFGELDE-LVLC 649 Query: 1398 YAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAI 1457 YA T H AQG+ + + +M Y ++R K V + ++ A+ Sbjct: 650 YATTIHKAQGSEYP--VVVMPISTQHYMMLKRNLIYTGITRGKTLVVLVGQ-KRALAMAV 706 >UniRef50_A4JFN0 AAA ATPase n=1 Tax=Burkholderia vietnamiensis G4 RepID=A4JFN0_BURVG Length = 858 Score = 237 bits (603), Expect = 4e-60, Method: Composition-based stats. Identities = 106/704 (15%), Positives = 186/704 (26%), Gaps = 106/704 (15%) Query: 884 MVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSI 943 + + A G + R L D G ++ S ++AE+ Sbjct: 205 EQKVCHFLGANGAMGAPEARGRAPTALHMARQKGLLKDATDEQGRPMVFSADFFDAEEQC 264 Query: 944 LRHILEGKEAVMPL--------MERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAG 995 +L + P + KL Q+ A ++ E R ++ G G Sbjct: 265 AHILLRMAKDQSPYHALDRKQALADAQEITGLKLLEQQQQAVEVLFEG--RVAIISGKPG 322 Query: 996 VGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA-GVDAQTLASFLHDTQLQQ 1054 GKTT + V + E + V PT +A MR + T+ L + Sbjct: 323 AGKTTLLKCVAPIL----EKDGRAVHYAAPTGKAAKRMRQSIERPTSTIHRMLGLGRGGA 378 Query: 1055 R---SGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQP 1111 + E P + + ++DE+SM+ I V GD QL +I G+ Sbjct: 379 KARPDDENPLKTASAVVIDEASMLDAKLTLAILRSIGPK-TLLVLVGDPGQLPSIRAGKV 437 Query: 1112 FRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWA 1171 +A A + +VRQ + V RA+ ES + P Sbjct: 438 LADLMDSNAFPTARLTNVVRQGAQSDIV-------KVARAIDSGESPDFTLHPDSPPERK 490 Query: 1172 PEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVT 1231 V + + P+ + I G Sbjct: 491 KSDCVFLEEPNAQRLGDRIANMLRNAQVDAKMDPLRDAQVIAASNVG------------- 537 Query: 1232 HLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVD 1291 G + + N EL T + + L Sbjct: 538 ------------------PTGAVALNATLQAAFNPPEPNKPELHVKRTVKGVDQSFALR- 578 Query: 1292 NVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSD 1351 D ++ + P + Sbjct: 579 ----------FGDKVMQTSNEASKALFDGPSDRSKPL----------------------- 605 Query: 1352 RERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASET 1411 E+G V + A+ V++ ++A + + L+YA T H QG+ Sbjct: 606 EEKGIFNGDVGYIVAMD--RVSMWVQFDNGHAHFSNDEARKSLTLSYANTVHKFQGSESP 663 Query: 1412 FAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNA--VQKGTAHDV 1469 E K + AY A++R + + + + +A + T Sbjct: 664 LIFFAMH-ESTPKPLLTRNLAYTAITRARTKC-IVIGSERRLNEAAGRDALATRHTRLKG 721 Query: 1470 FEPKPDREVMNAE------RLFSTARELRDVAAGRAVLRQAGLAGGDSPARFIAPGRKYP 1523 V + + R L A G +R S A A + Sbjct: 722 LLSGAIAPVSAPKDVVAIFASKAVERALAPNAPGADAVRSTAPVAQSSAAPASASQVSHV 781 Query: 1524 QPYVAL---PAFDRNGKSAGIWLNPLTTDDGNGLRGFSGEGRVK 1564 A+ + AG N + + D S + + Sbjct: 782 VATEAIGQAANPVASQSRAGQATNAIASPDATQSERASAPSQPR 825 Score = 157 bits (396), Expect = 4e-36, Method: Composition-based stats. Identities = 95/736 (12%), Positives = 197/736 (26%), Gaps = 61/736 (8%) Query: 244 AVGEDASLKSRDVAALDTRKSKQHVDP-----EIKMAEWMQTLKETGFDIRAYRDAADQR 298 +G +A+ R + +++ + + + + + G D A + Sbjct: 111 ELGANATTIGRAIEWAVDAENENAGEGPAVYFDAVLKDPHLLTEAPGIGFFKADDLALRA 170 Query: 299 ADLRTLTPGPASQDGPDVQQAVTQA-----IAGLSERKVQF-TYTDVLARTVGILPPENG 352 + + +A A + + ++ F + Sbjct: 171 GVATASEQRQLACARAALTEACDNAGGGARLGDVEQKVCHFLGANGAMGAPEARGRAPTA 230 Query: 353 VIERARAGIDEAISREQLIPLDREKGLFTSGI-----HVLDELSVRALSRDIMKQNRVTV 407 + + G+ + + EQ P+ F + + KQ Sbjct: 231 LHMARQKGLLKDATDEQGRPMVFSADFFDAEEQCAHILLRMAKDQSPYHALDRKQALADA 290 Query: 408 HPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIA 467 + AV VL + +AI+SG+ G AG+ + + + + GR V A Sbjct: 291 QEITGLKLLEQQQQAVEVLFEG--RVAIISGKPG-AGKTTLLKCVAPILEKDGRAVHYAA 347 Query: 468 ADRRSQMNMKQDERLSGELITGRRQL---------LEGMAFTPGSTVIVDQGEKLSLKET 518 ++ M+Q I L + S V++D+ L K T Sbjct: 348 PTGKAAKRMRQSIERPTSTIHRMLGLGRGGAKARPDDENPLKTASAVVIDEASMLDAKLT 407 Query: 519 LTLLDGAARHNVQVLITDSGQRTG--TGSALMAMKDAGVNTYRWQGGEQRPATIISEPDR 576 L +L + VL+ D GQ G L + D+ R Sbjct: 408 LAILRSIGPKTLLVLVGDPGQLPSIRAGKVLADLMDSNAFPTARLTNVVRQGAQSDIVKV 467 Query: 577 NVRYAR-LAGDFA---ASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMT 632 + DF S ++S L I + L+ V + Sbjct: 468 ARAIDSGESPDFTLHPDSPPERKKSDCVFLEEPNAQRLGDRIANMLRNAQVDAKMD---- 523 Query: 633 ALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQV 692 L P + + + ++ R +G Q Sbjct: 524 -----PLRDAQVIAASNVGPTGAVALNATLQAAFNPPEPNKPELHVK----RTVKGVDQS 574 Query: 693 VRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGR 752 + D + DG R + + + GD + ++ +M V Sbjct: 575 FALRFGDKVMQTSNEASKALFDGPSDR-SKPLEEKGIFNGDVGYIVAMDRVSMWVQFDNG 633 Query: 753 AEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASV----TQMAMDNATLNGLARS 808 +D +L L FA + N + R+ Sbjct: 634 ---HAHFSNDEARKSLTLSYANTVHKFQGSESPLIFFAMHESTPKPLLTRNLAYTAITRA 690 Query: 809 GRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAI 868 + S A + + + + +S K + A +A+ Sbjct: 691 RTKCIVIGSERRLNEAAGRDALATRHTRLKGLLSG-----AIAPVSAPKDVVAIFASKAV 745 Query: 869 HLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGT 928 AL A + ++ + A + + + A + + + G T Sbjct: 746 ERALAPNAPGADAVRSTAPVAQSSAAPASASQVSHVVAT-EAIGQAANPVASQSRAGQAT 804 Query: 929 GLLVSRASYEAEKSIL 944 + S + ++E++ Sbjct: 805 NAIASPDATQSERASA 820 >UniRef50_D1GQF3 Phage protein n=2 Tax=Staphylococcus RepID=D1GQF3_STAA0 Length = 761 Score = 236 bits (601), Expect = 7e-60, Method: Composition-based stats. Identities = 103/733 (14%), Positives = 220/733 (30%), Gaps = 108/733 (14%) Query: 730 SGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVF 789 + + L+V A ++ + L + E G + + ++ Sbjct: 97 ANEEFLRVILTDNQAEAIIDEFG------YSDELVKDILNDKVDITEVKGIKSATALSIK 150 Query: 790 ASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSL 849 +T+M+ + + LA G ++ SL + + + G Sbjct: 151 EKLTEMSKYSKAVIELAPLGASIKAVVSLADHY-GSVEKLLHIIENNIYDLTSAGGFGFK 209 Query: 850 ETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEIN 909 K + + Q I V + +A L F E+ + Sbjct: 210 RIDEYGLKKGISIDSPQRIRAGALYVIEQMVALGDTKL--SIDKFEENLCDILEIDEVDD 267 Query: 910 AQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAV--------MPLMERV 961 L+ D Y G + + E+ I+ H+ +++ +++ Sbjct: 268 ETF---SLIINDPNVYYDNGYISLKKYRREEELIVEHLRRIRDSFTSYDTNELEDIIKMN 324 Query: 962 PGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVV 1021 L Q+ A R + + ++ G AG GKT+ + + + V Sbjct: 325 EDRLGFTFNEQQKEAIRKAVS--NGVFILDGLAGSGKTSSLKTAIDII-------GLPHV 375 Query: 1022 GLGPTHRAVGEMRSAGVDAQTLASFLHDTQ--LQQRSGETPDFSNTLFLLDESSMVGNTD 1079 + +A + G+ A+T+ L E S + +LDE+SMV N Sbjct: 376 ACALSGKAANVLSQNGLKAKTIHRTLRFDPVNFGFLHNEENPLSEKVVILDEASMVDNKL 435 Query: 1080 MARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREA 1139 + G + + GD+ QL +I+ G F + + + E+ RQ E Sbjct: 436 FLDLIKAVE-SGSQLMIVGDSGQLPSISRGAVFDNLLDTTEFEHVTLTEVHRQAKESGTL 494 Query: 1140 VYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGE 1199 + R+ + ++ +T + +++ Q +A +K Sbjct: 495 QVANKIREGTQF-----------------NGYTDYGLTVYGDNKDFYYFGFQDRAAIKDN 537 Query: 1200 AFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQV 1259 V+ Y ++T L ++ GEL + Sbjct: 538 LLHT---------VKRYLSNKDMNPNDIQVITGL---------------KEKGELSVVNL 573 Query: 1260 MVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLI 1319 + N + ++ + + ++ K D +I + Sbjct: 574 NKELQELFNPQK----------------IVQNTLTGKVYEFRKGDRVIQQGNK------- 610 Query: 1320 SPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQ 1379 TL D V G + K+ E + + + L + Sbjct: 611 ------YTARTLGYSDFQDVANGFALLENKTFEETEVFNGTFGEIIECASGVGMLIKFEG 664 Query: 1380 TREIRPGQEQAEQH----IDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVA 1435 E+ + + + IDL YAI+ H +QG+ + + ++ + Y Sbjct: 665 VEELVFYEHTQKTNEIGIIDLGYAISCHRSQGSGFKT--LVGALSFSDYMLLSRQFLYTM 722 Query: 1436 LSRMKQHVQVYTD 1448 L+R ++ + Sbjct: 723 LTRTINQCFLFAE 735 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 74/661 (11%), Positives = 170/661 (25%), Gaps = 85/661 (12%) Query: 210 ALGYETEVV-----GKHGMWEMPGVP----------VEAFSGRSQTIREAVGEDASLKSR 254 GY E+V K + E+ G+ + S S+ + E AS+K+ Sbjct: 117 EFGYSDELVKDILNDKVDITEVKGIKSATALSIKEKLTEMSKYSKAVIELAPLGASIKA- 175 Query: 255 DVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGP 314 V +L I GF + D L G + Sbjct: 176 -VVSLADHYGSVEKLLHIIENNIYDLTSAGGFGFKRI--------DEYGLKKGISIDSPQ 226 Query: 315 DVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLD 374 ++ I + V T + + I+ I + + Sbjct: 227 RIRAGALYVIEQM----VALGDTKLSIDKFEENLCDILEIDEVDDETFSLIINDPNV--Y 280 Query: 375 REKGLFTSGIHVLDELSVRALSRDIM-----------KQNRVTVHPEKSVPRTAGYSDAV 423 + G + + +E + R I + +A+ Sbjct: 281 YDNGYISLKKYRREEELIVEHLRRIRDSFTSYDTNELEDIIKMNEDRLGFTFNEQQKEAI 340 Query: 424 SVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLS 483 + + I+ G G +G+ + + + G A ++ + Q+ L Sbjct: 341 RKAVSNG--VFILDGLAG-SGKTSSLKTAIDII---GLPHVACALSGKAANVLSQN-GLK 393 Query: 484 GELITGRRQLL--------EGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLIT 535 + I + VI+D+ + K L L+ Q++I Sbjct: 394 AKTIHRTLRFDPVNFGFLHNEENPLSEKVVILDEASMVDNKLFLDLIKAVE-SGSQLMIV 452 Query: 536 DSGQRTGT---GSALMAMKDAGVNTYRWQG--GEQRPATIISEPDRNVRYARLAGDFAA- 589 + + G+ + D + Q + + +R + Sbjct: 453 GDSGQLPSISRGAVFDNLLDTTEFEHVTLTEVHRQAKESGTLQVANKIREGTQFNGYTDY 512 Query: 590 -SVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRD 648 G+ G +++A + + +K LS ++ + Sbjct: 513 GLTVYGDNKDFYYFGFQDRAAIKDNLLHTVKRY------------LSNKDMNPNDIQVIT 560 Query: 649 MYRPGMVMEQWNPETRSHDRYVIDRVTAQS-HSLTLRDAQGETQVVRISSLDSSWSLFRP 707 + + N + + ++ + +G+ + + + + + Sbjct: 561 GLKEKGELSVVNLNKELQELFNPQKIVQNTLTGKVYEFRKGDRVIQQGNKYTARTLGY-S 619 Query: 708 EKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSED-AMTVVVPGRAEPATLPVSDSPFT 766 + VA+G L V G ++ + M + G E + Sbjct: 620 DFQDVANGFALLENKTFEETEVFNGTFGEIIECASGVGMLIKFEGVEELVFYEHTQKTNE 679 Query: 767 ALKLENGWVETPGHSVSDSATVFASVTQMA-----MDNATLNGLARSGRDVRLYSSLDET 821 ++ G+ + S + L R+ L++ Sbjct: 680 IGIIDLGYAISCHRSQGSGFKTLVGALSFSDYMLLSRQFLYTMLTRTINQCFLFAETSAV 739 Query: 822 R 822 Sbjct: 740 H 740 >UniRef50_C7IFQ7 AAA ATPase n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IFQ7_9CLOT Length = 1178 Score = 236 bits (600), Expect = 8e-60, Method: Composition-based stats. Identities = 111/665 (16%), Positives = 214/665 (32%), Gaps = 89/665 (13%) Query: 874 VVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVS 933 + + KK F+ + E + + EI +K ++ ++ G L + Sbjct: 485 MPDWKKAKFTQKYIEVE-EDVLDKQLELKRKDKEIYIYLK--EIYKLEDVIGSAVKELAA 541 Query: 934 RASYE-----AEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFT 988 R + + AEK +I + ++E+ K+ + + I + Sbjct: 542 RPNLKLKYPVAEKDWENYIYKK----DSIIEKRDPAKYRKIVDDRIEMCKRIFQKP--IC 595 Query: 989 VVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMR-SAGVDAQTLASFL 1047 V+ G AG GKTT A+++AV E L PT +A +R + G +A T+ SFL Sbjct: 596 VITGEAGTGKTTIVNAIINAVEK-STGEGTTFQLLAPTGKAAERLRLATGKNAATIHSFL 654 Query: 1048 HDTQL------QQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAG-GGRAVASGDT 1100 +R G D + ++DE SM+ + + I R + GD Sbjct: 655 VQRGWMNDNFTFKREGGVADETKKTIIIDECSMLDTVILGTLFKSINFNCVQRIIFVGDH 714 Query: 1101 DQLQAIAPGQPFRLQQTRSAADVA----IMKEIVRQTP------ELREAVYSLINRDVER 1150 +QL I G+PF I+ +R EL + N + E Sbjct: 715 NQLPPIGTGKPFAEIIDYLKKYYPDYIGILTPNIRLIEEGGISLELAQIFTENGNENEEG 774 Query: 1151 ALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYE 1210 L L+ + W E + E ++E K GE + ++ Sbjct: 775 ILQKLQYGGEIDKDLKVIFWKNESELKE------KVVSEIISKVRKDGEETEETVRYTFD 828 Query: 1211 AIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIR 1270 + + + + I++ + + G Q+M N N Sbjct: 829 RLFENQKSKFDRNPDNFQIISPYRNE-------------EYGTESVNQLMQQTFNNYNYE 875 Query: 1271 DGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVT 1330 T+ + Y A + L+ G + P A Sbjct: 876 KHGKLGGVTYFDKIIQYINRPKSYPYYAYNFSSRQVERLEVYNGEIGFMVPHAAD----- 930 Query: 1331 LYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQA 1390 + F S + + + + S + VT Sbjct: 931 ---------KLWSKPFFRLSKFQAKFKGKETFGIEFNSDNMVT----------------- 964 Query: 1391 EQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNR 1450 ++++LAYAI+ H AQG+ + + +R + E Y ++R K+H ++ ++ Sbjct: 965 -ENVELAYAISVHKAQGSDFDNVYFILPKKKSR--LLSKELFYTGITRAKKHTTLFIEDD 1021 Query: 1451 QGWTDAINNAVQKGTA---HDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLA 1507 G ++ + + E P E + + ++ A V ++ + Sbjct: 1022 IGALLSLRRKEASEVSKINSSIMEFNPIPEELLNINEWYEEGKIHRTLADFMVRSKSEVI 1081 Query: 1508 GGDSP 1512 + Sbjct: 1082 ISNML 1086 Score = 114 bits (284), Expect = 4e-23, Method: Composition-based stats. Identities = 63/723 (8%), Positives = 171/723 (23%), Gaps = 106/723 (14%) Query: 238 SQTIREAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQ 297 SQ I + + E R + + +P I E++ + Sbjct: 380 SQQISKILDE-----ERSKNGIYSSLEDIAENPYIICEEYIGDEPDDTISFSKIDHGIFP 434 Query: 298 RADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPP------EN 351 D + D ++ + A+ + + +L L Sbjct: 435 SPDFGVEALM-DTDDARRLRALLVDALKK-TAQHSFVNAKVLLGTINRKLEYMPDWKKAK 492 Query: 352 GVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTV---- 407 + D + +L D+E ++ E + + +++ + + + Sbjct: 493 FTQKYIEVEEDVLDKQLELKRKDKEIYIYL-KEIYKLEDVIGSAVKELAARPNLKLKYPV 551 Query: 408 -------------------HPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRER 448 P K + + Q + +++G+ G G+ Sbjct: 552 AEKDWENYIYKKDSIIEKRDPAKYRKIVDDRIEMCKRIFQ--KPICVITGEAG-TGKTTI 608 Query: 449 VAELVMMAREQ---GREVQIIAADRRSQMNMKQDERLSGELITGRR----QLLEGMAFTP 501 V ++ + G Q++A ++ ++ + I + + F Sbjct: 609 VNAIINAVEKSTGEGTTFQLLAPTGKAAERLRLATGKNAATIHSFLVQRGWMNDNFTFKR 668 Query: 502 --------GSTVIVDQGEKLSLKETLTLLDGAARHNV-QVLITDSGQR---TGTGSALMA 549 T+I+D+ L TL + V +++ + GTG Sbjct: 669 EGGVADETKKTIIIDECSMLDTVILGTLFKSINFNCVQRIIFVGDHNQLPPIGTGKPFAE 728 Query: 550 MKD----------AGVNTYRWQGGE-----QRPATIISEPDRNVRYARLAGDFAASVKAG 594 + D + E + + N + + Sbjct: 729 IIDYLKKYYPDYIGILTPNIRLIEEGGISLELAQIFTENGNENEEGILQKLQYGGEIDKD 788 Query: 595 EESVAQVSGVREQAILTQAIRSELKTQGVLGLP------EVTMTALSPVW---------L 639 + + + + + I S+++ G + + + Sbjct: 789 LKVIFWKNESELKEKVVSEIISKVRKDGEETEETVRYTFDRLFENQKSKFDRNPDNFQII 848 Query: 640 DSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLD 699 +M+Q + VT + + + Sbjct: 849 SPYRNEEYGTESVNQLMQQTFNNYNYEKHGKLGGVTYFDKIIQYIN-----RPKSYPYYA 903 Query: 700 SSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLP 759 ++S + E++ V +GE + ++ +++ E + Sbjct: 904 YNFSSRQVERLEVYNGE-IGFMVPHAADKLWSKPFFRLSKFQAK------FKGKETFGIE 956 Query: 760 VSDS--PFTALKLENGWVETPGHSVSDSAT--VFASVTQMAMDNA-TLNGLARSGRDVRL 814 + ++L + + G+ R+ + L Sbjct: 957 FNSDNMVTENVELAYAISVHKAQGSDFDNVYFILPKKKSRLLSKELFYTGITRAKKHTTL 1016 Query: 815 YSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPV 874 + D + S E ++ + + Sbjct: 1017 FIEDDIGALLSLRRKEASEVSKINSSIMEFNPIPEELLNINEWYEEGKIHRTLADFMVRS 1076 Query: 875 VES 877 Sbjct: 1077 KSE 1079 >UniRef50_C0QI06 RecD2 n=2 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QI06_DESAH Length = 665 Score = 236 bits (600), Expect = 9e-60, Method: Composition-based stats. Identities = 77/571 (13%), Positives = 155/571 (27%), Gaps = 79/571 (13%) Query: 928 TGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKL----TSGQ-------RAA 976 +G L R ++ + + I + + + L T + + Sbjct: 138 SGRLYLRRYWDCTRQVAEQIKRLSAKKIDVPHDLEQRLDGIFGAMRTPEENEKTEIHWQS 197 Query: 977 TRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLP--ESERPRVVGLGPTHRAVGEMR 1034 + ++ +++ G G GKTT ++ + L R+ PT +A + Sbjct: 198 VAAAIAATNALSIISGGPGTGKTTTVVQLLGILQTLAMEAGRGLRISLAAPTGKAAARLT 257 Query: 1035 SAGVDA----------------QTLASFLHDTQ--LQQRSGETPDFSNTLFLLDESSMVG 1076 + A TL L + L ++DE+SM+ Sbjct: 258 ESIAKAVDRLSLPVQEKMPKSVSTLHRLLGSRPDSRNFIHDQNNPLHVDLLVVDEASMID 317 Query: 1077 NTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPEL 1136 M I G R + GD DQL ++ G A T Sbjct: 318 LEMMNALLQAIPP-GARLILLGDKDQLASVEAGSVLGDLCESPA------------TACF 364 Query: 1137 REAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAML 1196 A + + + LS + S HS LA A + Sbjct: 365 LPATVAFLQQATGFDLSEF---SGPGREIDQQIVVLRKSHRFGEHSGIGALAGAVNQGDK 421 Query: 1197 KGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGK 1256 G + + + + + H N R++ K G G Sbjct: 422 NG-------------VAEVWRQGFSDIFQVRVPTCHDNRFHRLVLDGHSTTTGKEGPQGY 468 Query: 1257 EQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNT 1316 + + E L + ++ + G+ + I Sbjct: 469 RVFLETLSQGPGAFGSETDWLKAVLHGFNQFQVLTPLRRGEWGVEALNLAI--------- 519 Query: 1317 RLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSD 1376 A + T G + T++D G + + V + + + Sbjct: 520 -------ADVLYRSDLIDATQGWYPGRPVLVTRNDYSLGLMNGDMGIVAPTTRG-MRVVF 571 Query: 1377 GQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVAL 1436 ++ +++ YA+T H +QG+ + G + E Y + Sbjct: 572 PMGDGSLKLLLPSRLSNVETVYAMTVHKSQGSEFDHTAMVLP--GTVTPVITRELVYTGI 629 Query: 1437 SRMKQHVQVYTDNRQGWTDAINNAVQKGTAH 1467 +R + + + A+ Q+ + Sbjct: 630 TRARSWFTLVCPHEVILAAAVEQRTQRASGL 660 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 52/422 (12%), Positives = 115/422 (27%), Gaps = 50/422 (11%) Query: 459 QGREVQIIAADRRSQMNMKQDERLSGE---------------LITGRRQ--------LLE 495 +G + + A ++ + + + + + + + Sbjct: 239 RGLRISLAAPTGKAAARLTESIAKAVDRLSLPVQEKMPKSVSTLHRLLGSRPDSRNFIHD 298 Query: 496 GMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR--TGTGSALMAMKD- 552 ++VD+ + L+ LL +L+ D Q GS L + + Sbjct: 299 QNNPLHVDLLVVDEASMIDLEMMNALLQAIPPGARLILLGDKDQLASVEAGSVLGDLCES 358 Query: 553 --------AGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGV 604 A V + G + + + L +G ++A Sbjct: 359 PATACFLPATVAFLQQATGFDLSEFSGPGREIDQQIVVLRKSHRFGEHSGIGALAGAVNQ 418 Query: 605 REQAILTQAIRSELKTQGVLGLP---EVTMTALS-PVWLDSRSRYLRDMYRPGMVMEQWN 660 ++ + + R + +P + L + + YR + Sbjct: 419 GDKNGVAEVWRQGFSDIFQVRVPTCHDNRFHRLVLDGHSTTTGKEGPQGYRVFLETLSQG 478 Query: 661 PETRSHDRYVIDRVTAQSHSLTLRD--AQGETQVVRISSLDSSWSLFRPEKMP----VAD 714 P + + V + + +GE V ++ + L+R + + Sbjct: 479 PGAFGSETDWLKAVLHGFNQFQVLTPLRRGEWGVEALNLAIADV-LYRSDLIDATQGWYP 537 Query: 715 GERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGW 774 G + VT L + GD VA + M VV P + + + S + ++ Sbjct: 538 GRPVLVTRNDYSLGLMNGDMGIVA-PTTRGMRVVFP-MGDGSLKLLLPSRLSNVETVYAM 595 Query: 775 VETPGHSVSDSATVFA---SVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHP 831 T +VT + G+ R+ L + A R Sbjct: 596 TVHKSQGSEFDHTAMVLPGTVTPVITRELVYTGITRARSWFTLVCPHEVILAAAVEQRTQ 655 Query: 832 SF 833 Sbjct: 656 RA 657 >UniRef50_C0N790 Exodeoxyribonuclease V, alpha subunit n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N790_9GAMM Length = 578 Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats. Identities = 89/596 (14%), Positives = 191/596 (32%), Gaps = 97/596 (16%) Query: 886 DLLTEAKSFAAEG-TGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSIL 944 +++ + +F T + + E + K GD + + +GLL + E+ + Sbjct: 60 EIIHQLNAFLPNNATDWQQQLREAKSVGKPGDYTPLILT---ESGLLYLYRFWRDEQDVA 116 Query: 945 RHILEGKEAVMP-LMERVPGELMEKLTS-----GQRAATRMILETSDRFTVVQGYAGVGK 998 I++ + AV +E++ +L Q+ A M L V+ G G GK Sbjct: 117 HAIMQRRHAVDNVNLEQLQQDLANWHNPIAGVDWQKVAVAMALS--RHLAVISGGPGTGK 174 Query: 999 TTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA-----GVDAQTLASFLHDTQL- 1052 TT ++ + +S+ R+ PT +A ++ + + +TL L T+ Sbjct: 175 TTIVLKILQCLQN--QSDSLRIGLAAPTGKAAARLQQSISQQQTAEVKTLHRLLGITEHN 232 Query: 1053 -QQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQP 1111 Q R + ++DE+SM+ + MA+ R + GD+ QL ++ G Sbjct: 233 DQGRYNAERPLPLDVLIIDEASMIDISLMAKLMR-AMPAKARLILLGDSQQLASVESGAV 291 Query: 1112 FRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWA 1171 + V Q P L + N S + + ++ Sbjct: 292 LANLSESQQGTFT--ADFVAQFPALGLEDNTHQNETALLIDSFVRLQHSYRFDKESLVGQ 349 Query: 1172 PEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVT 1231 V +L Q +A+ + + + + I+ Sbjct: 350 LADHVNAADAETTLQLLNEQTEAIWFRTDERSL-LNVLTTGYNAFINAVENRLPPQDIIQ 408 Query: 1232 HLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVD 1291 ++ R V + + + V L + + R T+ + R ++ + Sbjct: 409 AFDQFR---------VLAALKQGPQSVMSVNRLMSRFLAQKGWRTNQTFYSGRPIMITQN 459 Query: 1292 NVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSD 1351 + + + D I L+DA+G+ + G+ +R+ Sbjct: 460 DYRQQ---LFNGDIGIILRDADGHLKAC-------------------FYFGEALRW---- 493 Query: 1352 RERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASET 1411 + + A + + +A+T H +QG+ Sbjct: 494 -------------------------------VSLNRLPAHETV---FAMTVHKSQGSEFD 519 Query: 1412 FAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAH 1467 L E + + E Y A++R ++ + + I+ Q+ + Sbjct: 520 AVSILLPDEIS--PILSRELLYTAITRARKTLTILAV-ENVLKHTIHRRHQRESGL 572 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 61/572 (10%), Positives = 154/572 (26%), Gaps = 45/572 (7%) Query: 289 RAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILP 348 + A Q A S +T+A++ +++ + LP Sbjct: 11 QGVSGLACQFATFIDRKEAGKSTVVSLTAGLLTEAMSQGHVCLNLANPPEIIHQLNAFLP 70 Query: 349 PENGVIERARAGIDEAISREQLIPL-DREKGLFTSGIHVLDELSVRALSRDIMKQ----- 402 ++ PL E GL DE V Sbjct: 71 NNATDWQQQLREAKSVGKPGDYTPLILTESGLLYLYRFWRDEQDVAHAIMQRRHAVDNVN 130 Query: 403 ----NRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMARE 458 + + + AV++ V G G+ V +++ + Sbjct: 131 LEQLQQDLANWHNPIAGVDWQKVAVAMALS---RHLAVISGGPGTGKTTIVLKILQCLQN 187 Query: 459 QG--REVQIIAADRRSQMNMKQD----ERLSGELITGRRQLLEGMA--------FTPGST 504 Q + + A ++ ++Q + + + + E P Sbjct: 188 QSDSLRIGLAAPTGKAAARLQQSISQQQTAEVKTLHRLLGITEHNDQGRYNAERPLPLDV 247 Query: 505 VIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTG---TGSALMAMKDAGVNTYRWQ 561 +I+D+ + + L+ A ++++ Q+ +G+ L + ++ T+ Sbjct: 248 LIIDEASMIDISLMAKLMR-AMPAKARLILLGDSQQLASVESGAVLANLSESQQGTFTAD 306 Query: 562 GGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQ 621 Q PA + + A L F + ++ L + + Sbjct: 307 FVAQFPALGLEDNTHQNETALLIDSFVRLQHSYRF---------DKESLVGQLADHVNAA 357 Query: 622 GVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSL 681 ++ +W + R L ++ G E R + +I + Sbjct: 358 DAETTLQLLNEQTEAIWFRTDERSLLNVLTTGYNAFINAVENRLPPQDIIQAFDQFR--V 415 Query: 682 TLRDAQGETQVVRISSLDSSWSLFR--PEKMPVADGERLRVTGKIPGLRVSGGDRLQVAS 739 QG V+ ++ L S + + G + +T ++ GD + Sbjct: 416 LAALKQGPQSVMSVNRLMSRFLAQKGWRTNQTFYSGRPIMITQNDYRQQLFNGDIGIILR 475 Query: 740 VSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDN 799 ++ + + ++ P ++ G + + + Sbjct: 476 DADGHLKACFYFGEALRWVSLNRLPAHETVFAMTVHKSQGSEFDAVSILLPDEISPILSR 535 Query: 800 A-TLNGLARSGRDVRLYSSLDETRTAEKLARH 830 + R+ + + + + + + Sbjct: 536 ELLYTAITRARKTLTILAVENVLKHTIHRRHQ 567 >UniRef50_D2SC15 TrwC relaxase n=4 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2SC15_9ACTO Length = 1223 Score = 235 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 158/1051 (15%), Positives = 273/1051 (25%), Gaps = 169/1051 (16%) Query: 10 AGSAGNYYTDK-----DNYYVLGSMG-----ERWAGRGAEQLGLQGSVDKDVFTRLLEGR 59 A +A +Y + D+YY+ G GR E L G D + + G Sbjct: 11 APAAARHYVEAGRGRADDYYLTEGAGLARRYTAGDGRVTELDVLAG----DGYEAWVAGL 66 Query: 60 LPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGD--KRLIDAHNQAVDFAVRQV 117 PD R ++ + PKS S+ A L D A ++A + + Sbjct: 67 DPDTGAARGRLRTDERAVRFVEVVINGPKSWSLAAALHPDIAAAYDAAQDRAAVQIIGWL 126 Query: 118 EALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSS 177 A+TRV G V L H TSR +P H H ++ G W+ L + Sbjct: 127 GEHATTRVGPRGGQVQVPVERLEAVTVRHYTSRAGDPHRHLHLQMSARVLAAGRWRGLHT 186 Query: 178 DKVGK-TGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVEAFSG 236 V I + +A +R L GY + G E+ V AFS Sbjct: 187 VGVRDFLAAINGIGHAAVACDPQFRAALAAH----GYTLDGTGDLP--ELADY-VGAFSA 239 Query: 237 RSQTI------------REAVGEDASLKSRDV----AALDTRKSKQHVDP-EIKMAEWMQ 279 R+ I E G+ R A + R K P A W+ Sbjct: 240 RAAQIGRNLDRYERQWTIEHPGQTPGPGLRRAWDRRAWAEGRPDKVTPQPGADLTARWVA 299 Query: 280 TLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDV 339 L G R R + P G D AV + ++ L+ + + DV Sbjct: 300 ELAALG-----------HRDPERPVALTPTPIGGVDRDGAVERVLSRLAAGRSAWNAADV 348 Query: 340 LARTVGILPPENGVIER-ARAGIDE-----------AISREQLIPLDREKGLFTSGIHVL 387 +L V++ R + E + + +T+ + Sbjct: 349 RGEIEQLLAASGVVVDAGVRIELAEDLTARAMARCVLLLDRDGAVVPEHIRAWTAQPVLD 408 Query: 388 DELSVRALSRDIMKQNRVTVHPEKSVPRTA--------GYSDAVSVLAQDRPSLAIVSGQ 439 E + E A G + AV+ LA DR IV Sbjct: 409 VEADLTDRLAARSTPAPADRRREHEPELLAVVRGRLDTGQAAAVTALASDRS--LIVLEG 466 Query: 440 GGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSG--------------- 484 AG+ +A + +GR + ++ ++ + + Sbjct: 467 AAGAGKTTTLAAARQLLEARGRRLLVVTPTLKAAKVAAAEVGTAAGSAAWLAFQHGWRWN 526 Query: 485 ---------------ELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHN 529 T G ++VD+ L LL A Sbjct: 527 RDGVWARLAVGDADPRTGAVYTGPEREAGLTSGDLLVVDEAGMLDQDTARALLTVADEAG 586 Query: 530 VQVLITDSGQRTGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAA 589 ++ + + + D R+ ++A Sbjct: 587 ARLALLGDRHQLAAVGRGGVL-DLAAGRVDPMAHLVLDGIHRFTCTDQDRHTSPDTEYAE 645 Query: 590 SVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDM 649 A A+ L +G + L L + Sbjct: 646 LTLAMRTG-----------ADPGAVFDALAARGRIRLHPDPAALQET--LATLVAAHHRD 692 Query: 650 YRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEK 709 P V+ + + DR+ A D + Sbjct: 693 GEPMAVVVDTREQAAELGAAIRDRLVADGRV------------------DDTRVAISGAG 734 Query: 710 MPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSD------- 762 + G+R+ L V+ D V ++ VV G P +D Sbjct: 735 QRIGVGDRIATRRNDRDLGVANRDTWTVTAIGSHDELVVRCGDPVPTDRAAADVTPSTVD 794 Query: 763 -------------SPFTALKLENGWVETPGHSVSDSA-TVFASVTQMAMDNATLNGLARS 808 + + +E +V T D+ V + A G+ R Sbjct: 795 GVTPAQAGQRVLPTEYVTAHVELAYVSTAHGVQGDTVPAAHLVVGEHTGAAAAYVGMTRG 854 Query: 809 GRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPA---Q 865 + + A + ++ A + + A + + Sbjct: 855 RTANTAHLVAEHLAEAREQWVAAFGRDRADLGPGHAAQLAAVEAARYATPRVVEQVLADL 914 Query: 866 QAIHLALPVVESKKLAFSMV-DLLTEAKSFAAEGTG------FTELGGEINAQIKRGDLL 918 Q + + D+L +A + A G + A + Sbjct: 915 QQVWTVEQRSLERLAVLQPWCDVLRQAVALEAPHVGELARLEAEHRQASLAAHQATQRVQ 974 Query: 919 YVDVAKGYGTGLLV--SRASYEAEKSILRHI 947 A + A+++AE+ R Sbjct: 975 AAGAALAAEADRIRGGLLAAWDAERGAARAA 1005 Score = 133 bits (335), Expect = 5e-29, Method: Composition-based stats. Identities = 152/990 (15%), Positives = 261/990 (26%), Gaps = 140/990 (14%) Query: 800 ATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSA 859 T R D R ++ + + + V+E + A++ Sbjct: 262 QTPGPGLRRAWDRRAWAEGRPDKVTPQPGADLTARWVAELAALGHRDPERPVALTPTPIG 321 Query: 860 LHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAA------EGTGFTELGGEINAQIK 913 A+ L + + + A++ D+ E + A + EL ++ A+ Sbjct: 322 -GVDRDGAVERVLSRLAAGRSAWNAADVRGEIEQLLAASGVVVDAGVRIELAEDLTARAM 380 Query: 914 RGDLLYVDVAKG---YGTGLLVSRASYEAEKSILRHILEG-----KEAVMPLMERVPGEL 965 +L +D ++ + E + + + + + Sbjct: 381 ARCVLLLDRDGAVVPEHIRAWTAQPVLDVEADLTDRLAARSTPAPADRRREHEPELLAVV 440 Query: 966 MEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGP 1025 +L +GQ AA L + V++G AG GKTT +A L E+ R++ + P Sbjct: 441 RGRLDTGQAAAV-TALASDRSLIVLEGAAGAGKTTTL----AAARQLLEARGRRLLVVTP 495 Query: 1026 T-HRAVGEMRSAGVDAQTLASFLHDTQLQQRS------------------------GETP 1060 T A G A + A + E Sbjct: 496 TLKAAKVAAAEVGTAAGSAAWLAFQHGWRWNRDGVWARLAVGDADPRTGAVYTGPEREAG 555 Query: 1061 DFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSA 1120 S L ++DE+ M+ + G R GD QL A+ G L Sbjct: 556 LTSGDLLVVDEAGMLDQDTARALLTVADEAGARLALLGDRHQLAAVGRGGVLDL------ 609 Query: 1121 ADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFS 1180 ++ L G+ + R +T Sbjct: 610 -------------------AAGRVDPMAHLVLDGIHRFTCTDQDRHTSPDTEYAELTLAM 650 Query: 1181 HSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVL 1240 + A A P L E + + E +V E L Sbjct: 651 RTGADPGAVFDALAARGRIRLHPDPAALQETLATLVAAHHRD-GEPMAVVVDTREQAAEL 709 Query: 1241 NSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGI 1300 + I D G + +V + A R G R++T RD + + + I Sbjct: 710 GAAIRDRLVADGRVDDTRVAIS---GAGQRIGVGDRIATRRNDRDL-GVANRDTWTVTAI 765 Query: 1301 SKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANS 1360 D L+ T +R + Sbjct: 766 GSHDELVVRCGDPVPT------------------------------------DRAAADVT 789 Query: 1361 VWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTE 1420 TV V+ + E H++LAY TAHG QG + A + G Sbjct: 790 PSTVDGVTPAQA--------GQRVLPTEYVTAHVELAYVSTAHGVQGDTVPAAHLVVGEH 841 Query: 1421 GNRKLMAGFESAYVALSRMK--QHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREV 1478 +AYV ++R + + ++ + A + A D+ + Sbjct: 842 TGAA------AAYVGMTRGRTANTAHLVAEHLAEAREQWVAAFGRDRA-DLGPGHAAQLA 894 Query: 1479 MNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKS 1538 ++T R + V A + + A Q A Sbjct: 895 AVEAARYATPRVVEQVLADLQQVWTVEQRSLERLAVLQPWCDVLRQ------AVALEAPH 948 Query: 1539 AGIWLNPLTTDDGNGLRGFSGEGRVKGSGDAQFVALQGSRNGESLLADNMQDGVRIARDN 1598 G L RV+ +G A R G D + R A Sbjct: 949 VGELARLEAEHRQASLAAHQATQRVQAAGAALAAEADRIRGGLLAAWDAERGAARAAPRV 1008 Query: 1599 PDSGVVVRIAGEGRPWNPGAITGG-----RVWGDIPDNSVQPGAGNGEPVTAEVLAQRQA 1653 G G G R + A + R Sbjct: 1009 VLDGPGWWGLKREPVTRAGEQLAGWAGRWRSHLPGLPTEPEQLAREADRGDDRPALWRSF 1068 Query: 1654 EEAIRRETERRADEIVRKMAENKPDLPDGKTEQAVREIAGQER-DRAAITEREAALPEGV 1712 + RR E++ E+ A + G+ QA A + R DR A P+ Sbjct: 1069 DTVARRAAEQQHPELAGLHAAAEAARRAGEQAQAALTDAHRRRADRLDPLGPTAWAPDPA 1128 Query: 1713 LREPQRVREAVREIARENLLQERLQQMERD 1742 R R + R+ ++ D Sbjct: 1129 GRLTVLERSVTTTRHELAAARARIADLQAD 1158 >UniRef50_Q83YK2 Putative uncharacterized protein n=1 Tax=Bifidobacterium longum RepID=Q83YK2_BIFLO Length = 1387 Score = 233 bits (593), Expect = 6e-59, Method: Composition-based stats. Identities = 146/978 (14%), Positives = 282/978 (28%), Gaps = 158/978 (16%) Query: 52 FTRLLEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGD--KRLIDAH--- 106 LL+GR PD +L + N Y++ + K + + +++ GD + + A Sbjct: 80 LEMLLDGRDPDSGELLKSFRAGNVR--AYEIPLNDSKDLDVASVVYGDVREARMKAQARG 137 Query: 107 NQAVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVT 166 +AV + E L DG+ V ++ H TSR +P+LH H + N Sbjct: 138 EEAVRRFLA--ERLTVRLRCGDGRRRWVRPDEVMFVSATHFTSRAGDPELHRHLELINRV 195 Query: 167 QHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEM 226 + EW ++ S ++ +G L + + A G ++ G+ Sbjct: 196 RVGDEWYSIDSSRLFGMYENIRSVYETTVYG---DAGLCDAMAAHGMTLDMQGRVPEL-- 250 Query: 227 PGVPVEAFSGRSQTIREAVG--------------------------------------ED 248 G + FS R I + E Sbjct: 251 -GNASDVFSKRRDAINARMAELVDEWRAAHADGMRRVRDPETGDVVGMVGYGTVAEPDER 309 Query: 249 ASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGP 308 ++ R A DTR++K + + W + L+ G+DI A D A R + G Sbjct: 310 TLMRLRLQAWADTRQAKGRWNTRVDYGAWNEELRAAGYDIPAMLDGAAADPRPRAVGFGA 369 Query: 309 ASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVG--ILPPENGVIERARAGID--EA 364 + V++ AIA L E ++ + L G + +A + Sbjct: 370 DA-----VRRCAVAAIAALREMNSAWSLEQLEVAAYDQVRLTGATGTRDELQALAEGIRD 424 Query: 365 ISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVP---------- 414 +RE + L + + L +V ++ + E + P Sbjct: 425 RARELCVMLSEDPRARAGWVKSLTCRAVVECEDELKGRLAARGVEETASPRLDDLAERYT 484 Query: 415 RTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQM 474 AG +AV + + LA+V G G AG+ + + RE G+ + I +++ + Sbjct: 485 LDAGQREAVETICK-GDPLAVVEGAAG-AGKTHMLNAVNDYCRENGKRLVIATPTQKAAL 542 Query: 475 NMKQDERLSGELITGRRQLL--------------------------------EGMAFTPG 502 ++ + + + Sbjct: 543 VAGEEVGTGTGTLMRLLEAYGWRHDETNPEHPWYRVAEGQSDHRGNTYRGVPDEYRLDRD 602 Query: 503 STVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMKDAGVNTYRWQG 562 + ++VD+ + + L LL A ++ + + M+ Sbjct: 603 TFLVVDEAGMMDQDQALALLRVADETGARLTLVGDTMQLNAVGRGGVMQ---------LA 653 Query: 563 GEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQG 622 + + D+AA E E+ R ++ Sbjct: 654 ERYTGNVVAMRDVHRFKDP----DYAAYTIRLRERT---PANAERLAGELFDRGMVRHW- 705 Query: 623 VLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLT 682 E T+ A++ W++ + + D V L Sbjct: 706 --DSDEATVNAIAAAWMEHPDTTISTV-----------------TNRQADEVNRAIQRLR 746 Query: 683 LRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSE 742 L L + + G+ + + V+ V + E Sbjct: 747 L----------DAGQLGDERCASMIDGQEIHVGDIVMTRRNDNHIGVANRQTFAVLGIDE 796 Query: 743 DAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATL 802 + +V G + ++ A++L V+ +F + + A Sbjct: 797 RSGMLV--GDGKRTYRLPAEYVAEAVQLGYASTTYGAQGVTSGHAIFYA-AEGASGADAY 853 Query: 803 NGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHT 862 L R +++ + A +++ A E Q + Sbjct: 854 VALTRGKTGNQVFMTAGGDEDARDTLTRIIARDKADKGLEAAANNLREQ--IGQMAEPVD 911 Query: 863 PAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKR-GDLLYVD 921 A + + L LL A A EL EI + +R G+L Sbjct: 912 AGLNAEESSELRDLDRWLHGRKAGLLQGADRRAWASEPLPELYAEIEREQRRAGELSERI 971 Query: 922 VAKGYGTGLLVSRASYEA 939 SRA + A Sbjct: 972 RDMRDQYDTARSRAEHVA 989 Score = 190 bits (481), Expect = 5e-46, Method: Composition-based stats. Identities = 148/929 (15%), Positives = 249/929 (26%), Gaps = 178/929 (19%) Query: 871 ALPVVESKKLAFSMVDLLTEA---KSFAAEGTGFTELGGEINAQIKRGD-----LLYVDV 922 A+ + A+S+ L A EL R L Sbjct: 379 AIAALREMNSAWSLEQLEVAAYDQVRLTGATGTRDELQALAEGIRDRARELCVMLSEDPR 438 Query: 923 AKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILE 982 A+ L RA E E + + L +GQR A I + Sbjct: 439 ARAGWVKSLTCRAVVECEDELKGRLAARGVEETASPRLDDLAERYTLDAGQREAVETICK 498 Query: 983 TSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM-RSAGVDAQ 1041 D VV+G AG GKT AV N R+V PT +A G Sbjct: 499 -GDPLAVVEGAAGAGKTHMLNAV----NDYCRENGKRLVIATPTQKAALVAGEEVGTGTG 553 Query: 1042 TLASFLHDTQLQQRS--------------------------GETPDFSNTLFLLDESSMV 1075 TL L + E +T ++DE+ M+ Sbjct: 554 TLMRLLEAYGWRHDETNPEHPWYRVAEGQSDHRGNTYRGVPDEYRLDRDTFLVVDEAGMM 613 Query: 1076 GNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPE 1135 + G R GDT QL A+ G +L + + +V M+++ R Sbjct: 614 DQDQALALLRVADETGARLTLVGDTMQLNAVGRGGVMQLAERYTG-NVVAMRDVHRFKDP 672 Query: 1136 LREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAM 1195 A + L A + Sbjct: 673 DYAAYTIRLRERTPANAERL----------------------------------AGELFD 698 Query: 1196 LKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELG 1255 D AI + T I T N +N I +R AG+LG Sbjct: 699 RGMVRHWDSDEATVNAIAAAWMEHPD-----TTISTVTNRQADEVNRAIQRLRLDAGQLG 753 Query: 1256 KEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGN 1315 E+ + + ++ + + + + + + + + GI + G++ +G Sbjct: 754 DERCA----SMIDGQEIHVGDIVMTRRNDNHIGVANRQTFAVLGIDERSGMLV---GDGK 806 Query: 1316 TRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLS 1375 P E VAE V L T G G + Sbjct: 807 RTYRLPAEYVAEAVQLGYASTTYGAQGVTSGHAIFYAAEGASGADAYV------------ 854 Query: 1376 DGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVA 1435 A+T +G + G + + + Sbjct: 855 -----------------------ALT----RGKTGNQVFMTAGGDEDARDTLTR------ 881 Query: 1436 LSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVA 1495 + D +A N +++ E ++A + ELRD+ Sbjct: 882 --------IIARDKADKGLEAAANNLREQIG-------QMAEPVDAGLNAEESSELRDLD 926 Query: 1496 AGRAVLRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTT------- 1548 + L G D A P + +R + AG + Sbjct: 927 RWLHGRKAGLLQGADRRAWASEPLPEL------YAEIEREQRRAGELSERIRDMRDQYDT 980 Query: 1549 --DDGNGLRGFSGEGRVKGSGDAQFVALQGSRNGESLLADNMQDGVR-IARDNPDSGVVV 1605 + + + S + E +AD+ +D R + R + D + Sbjct: 981 ARSRAEHVADDYRDCLRELSDKCGAALDAAAARLERDMADDWRDVHRLLERHHEDETERL 1040 Query: 1606 RIAGEGRPWNPGAITGGRVWGDIPDNSVQPGAGNGEPVTAEVLAQRQAEEAIRRETERRA 1665 R+ P G + G R + AE + R + Sbjct: 1041 RLTDRNEPGYRGFVMGRRRLAGEAAERANQSLMRYQAARAEFEDRWHIGYGEYRSSHELR 1100 Query: 1666 DEIVRKMAENKPDLPDGKTEQAVREIAGQERDRAAITEREAALPEGVLREPQRVREAVRE 1725 + R AE P + D + +R++ + + E + PE R RV+E E Sbjct: 1101 AALARSRAEETPAVTDLR--DRMRDLEHEREH-----DPEISAPE---RLRARVQELGHE 1150 Query: 1726 IARENLLQERLQQMERDMVRDLQKEKTLG 1754 + M D+++ +TLG Sbjct: 1151 YEEVLRANADRRSMA-----DIRQAETLG 1174 >UniRef50_D1R7Z3 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R7Z3_9CHLA Length = 727 Score = 233 bits (593), Expect = 6e-59, Method: Composition-based stats. Identities = 90/629 (14%), Positives = 185/629 (29%), Gaps = 71/629 (11%) Query: 642 RSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSS 701 R G + Q R+ D + + G+ + I Sbjct: 9 IERITFQNPETGYTVAQLKEAKRT-DLVCVVGIMPALQPGETVRCWGQWKRHLIHGNQFE 67 Query: 702 WSLFRPEKMPVADGERLRVTGK-----IPGLRVSGGDRLQ----------VASVSEDAMT 746 ++ E A + L +T I G+ R+ + Sbjct: 68 VERYQVE----APADILGITKYLGSGLIKGIGPKYAARIVEKFGTETLDMIDRFPNRLSE 123 Query: 747 VVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLA 806 + G T+ + +++ +++ G S + + +F + ++ N Sbjct: 124 IPGLGAKRIETIKTCWAEQKSIRDVMIFLQAHGVSPTYAQKIFKAYGTHSIAKVKENPFH 183 Query: 807 RSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQ-IKTRAGETSLETAISHQKSALHTPAQ 865 + D+ A+KL ++ ++ ++ E + + + + A Sbjct: 184 LAR-DIFGIGFKTADLIAQKLGIDSKSSIRTDAGVEFVLSELASDGNVCYPVDLFIEEAN 242 Query: 866 QAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKG 925 + + + + + +++ L+ G Sbjct: 243 KVLEIEQEKISERISVLKEQ------------------------GRVEHFKLI----HAG 274 Query: 926 YGTGLLVSRASYEAEKSILRHILEGKEA--------VMPLMERVPGELMEKLTSGQRAAT 977 + + + AE I R I A V ++ + E L Q+ A Sbjct: 275 EPLQFIWLKPLFVAEVGIAREIQRLLSAPVVLRDVDVDKALQWIQAEHCIDLAVNQKEAV 334 Query: 978 RMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRS-A 1036 L + ++ G G GK+T +A++ L +++ PT RA M Sbjct: 335 AQALF--QKMHIITGGPGTGKSTITKAILGITEKLTS----KILLAAPTGRAAKRMSEIT 388 Query: 1037 GVDAQTLASFLHD--TQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRA 1094 G A T+ S L + + L ++DESSM+ M I R Sbjct: 389 GKKASTIHSLLEYDFKGKGFKRNRSSPLVCDLLIIDESSMIDTFLMYSLLKAI-PDNARV 447 Query: 1095 VASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAV-YSLINRDVERALS 1153 + GD +QL ++ PG + V + EI RQ INR + + Sbjct: 448 IFVGDINQLPSVGPGNVLQDLIASQVVSVTTLNEIFRQAAGSFIITNAHRINRGMFPDIR 507 Query: 1154 GLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAK--LAEAQQKAMLKGEAFPDVPMTLYEA 1211 L V QE + V S K + +L ++ + A Sbjct: 508 NLSQSDFFFVEAQETEDVLKQIVALVSQRLPKKYDFHPSDDIQVLAPMKKGNIGIDNLNA 567 Query: 1212 IVRDYTGRTPEAREQTLIVTHLNEDRRVL 1240 ++++ + +N+ + Sbjct: 568 VLQETLNPNQTPLMRQGRKLMVNDKVMQI 596 Score = 216 bits (549), Expect = 7e-54, Method: Composition-based stats. Identities = 86/690 (12%), Positives = 185/690 (26%), Gaps = 110/690 (15%) Query: 194 IAFGRLYREKLKEQVEALGYET-EVVGKHGMW--EMPGVPVEAF-----------SGRSQ 239 G Y ++ VE G ET +++ + E+PG+ + S R Sbjct: 92 KGIGPKYAARI---VEKFGTETLDMIDRFPNRLSEIPGLGAKRIETIKTCWAEQKSIRDV 148 Query: 240 TI-REAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQR 298 I +A G + + A T + + +A R + Sbjct: 149 MIFLQAHGVSPTYAQKIFKAYGTHSIAKVKENPFHLA-------------RDIFGIGFKT 195 Query: 299 ADLRTLTPGPASQDGPDVQQAVTQAIAGL-SERKVQFTYTDVLARTVGILPPENGVI--- 354 ADL G S+ V ++ L S+ V + + +L E I Sbjct: 196 ADLIAQKLGIDSKSSIRTDAGVEFVLSELASDGNVCYPVDLFIEEANKVLEIEQEKISER 255 Query: 355 -----ERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMK-----QNR 404 E+ R + I + + K LF + + + E+ + +++ + Sbjct: 256 ISVLKEQGRVEHFKLIHAGEPLQFIWLKPLFVAEVGIAREIQRLLSAPVVLRDVDVDKAL 315 Query: 405 VTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQ 464 + E + +AV+ + + G G+ ++ + + ++ Sbjct: 316 QWIQAEHCIDLAVNQKEAVAQALFQK---MHIITGGPGTGKSTITKAILGITEKLTSKIL 372 Query: 465 IIAADRRSQMNMKQDERLSGELITGRRQL-LEGMAFTPG-------STVIVDQGEKLSLK 516 + A R+ M + I + +G F +I+D+ + Sbjct: 373 LAAPTGRAAKRMSEITGKKASTIHSLLEYDFKGKGFKRNRSSPLVCDLLIIDESSMIDTF 432 Query: 517 ETLTLLDGAARHNVQVLITDSGQR---TGTGSALMAMKDAGVNTYRWQGGEQRPATIISE 573 +LL N +V+ + G G+ L + + V + R A Sbjct: 433 LMYSLLKAIPD-NARVIFVGDINQLPSVGPGNVLQDLIASQVVSVTTLNEIFRQAAGSFI 491 Query: 574 PDRNVRYARLAGDFAASVKAGEESVAQVSGVREQ-AILTQAIRSELKTQGVLGLPEVTMT 632 R R ++ + + + + + L + P + Sbjct: 492 ITNAHRINRGMFPDIRNLSQSDFFFVEAQETEDVLKQIVALVSQRLPKKYDFH-PSDDIQ 550 Query: 633 ALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQV 692 L+P M++ N + + + + + L Sbjct: 551 VLAP-------------------MKKGNIGIDNLNAVLQETLNPNQTPLM---------- 581 Query: 693 VRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGR 752 + + +++ V GD ++ + VVV Sbjct: 582 --------------RQGRKLMVNDKVMQIRNNYSKEVFNGDIGRIVDIDHVEQQVVVKVE 627 Query: 753 AEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQ---MAMDNATLNGLARSG 809 + S + L V T + N + R Sbjct: 628 ERE--ICYEFSELDEIVLAYAVSIHKYQGSECPCVVIPVHTSHFKLLYRNLLYTAVTRGK 685 Query: 810 RDVRLYSSLDETRTAEKLARHPSFTVVSEQ 839 + V L + A + +Q Sbjct: 686 KLVVLVGTKKALSIAVRNDEIKKRYTGLKQ 715 Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats. Identities = 37/266 (13%), Positives = 84/266 (31%), Gaps = 22/266 (8%) Query: 1206 MTLYEAIVRDYTGRTPEAREQTLIVTHLNEDR--RVLNSMIHDVREKAGELGKEQVMVPV 1263 L + V T R+ N R R + I ++ + + Q V Sbjct: 466 QDLIASQVVSVTTLNEIFRQAAGSFIITNAHRINRGMFPDIRNLSQSDFFFVEAQETEDV 525 Query: 1264 LNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPRE 1323 L + D + ++ + GI + ++ T L+ Sbjct: 526 LKQIVALVSQRLPKKYDFHPSDDIQVLAPMKKGNIGIDNLNAVLQETLNPNQTPLM---- 581 Query: 1324 AVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREI 1383 ++ D++ +++ + + + + + + REI Sbjct: 582 ----------RQGRKLMVNDKVMQIRNNYSKEVFNGDIGRIVDIDHVEQQVVVKVEEREI 631 Query: 1384 RPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHV 1443 + ++ I LAYA++ H QG+ + T + Y A++R K+ V Sbjct: 632 CYEFSELDE-IVLAYAVSIHKYQGSECPCVVIPVHTS--HFKLLYRNLLYTAVTRGKKLV 688 Query: 1444 QVYTDNRQGWTDAINNAV--QKGTAH 1467 + ++ + A+ N ++ T Sbjct: 689 VLV-GTKKALSIAVRNDEIKKRYTGL 713 >UniRef50_C5CL22 Exodeoxyribonuclease V, alpha subunit n=3 Tax=Betaproteobacteria RepID=C5CL22_VARPS Length = 708 Score = 232 bits (591), Expect = 9e-59, Method: Composition-based stats. Identities = 79/600 (13%), Positives = 154/600 (25%), Gaps = 85/600 (14%) Query: 931 LVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTS--------------GQRAA 976 L R +E E+ + + + +P+ +++L Q+AA Sbjct: 151 LYLRRYWEDERRVAAQVDARSRSELPVDPVTVRMWLDRLFPADTHASPDSEAAIDWQKAA 210 Query: 977 TRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPES-ERPRVVGLGPTHRAVGEMRS 1035 + L + + +++ G G GKT +++ + + + ER R+ PT +A ++ Sbjct: 211 CAVALRS--KLSILTGGPGTGKTYTAARLLALLYAVDPAPERLRIALAAPTGKAAARLKQ 268 Query: 1036 AGVD------------------------AQTLASFLHDTQLQQRSGETP--DFSNTLFLL 1069 A A+TL + L + G + ++ Sbjct: 269 AIETSLTELQDRLGDSLSLGALAAHIGAARTLHALLGARPDTRAFGFDAAHPLDVDVVIV 328 Query: 1070 DESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEI 1129 DE+SM+ MA R + GD DQL ++ G + + + Sbjct: 329 DEASMIHLEMMAALLE-ALPTQARVILLGDKDQLASVEAGAVLGDLCRHAEHGLYRLSTA 387 Query: 1130 VRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAE 1189 + + + D P + S + LA Sbjct: 388 AYVEAASGQHIPAAYMGDGP--------------PLAQQTVMLRASKRFGGAIGQLALAA 433 Query: 1190 AQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVRE 1249 + + D + Q Sbjct: 434 NRGDSAAAEALLRDDSSPAVAWLDGGSASTAVRLALQGRDAAGEAGGVDDAVGAYGGYGV 493 Query: 1250 KAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITL 1309 L A LR + I + Sbjct: 494 YLTALQARPRGDEAPAHAGWTLAVLRAFERFRVLCAVREGEWGAMGLNQAIERALVAEGR 553 Query: 1310 QDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSG 1369 G P + T++D G + + Sbjct: 554 LTKAGEWYEGRP-----------------------VIVTRNDAGLGVFNGDIGITLKPAA 590 Query: 1370 DSVTLSDGQQTRE-IRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAG 1428 L E +R H++ A+A+T H +QG+ + E +R + Sbjct: 591 KGAPLRAYFLDGESVRSVAVSRLAHVETAFAMTVHKSQGSEFAHTALVLPREPSR--VLT 648 Query: 1429 FESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTA-HDVFEPKPDREVMNAERLFST 1487 E Y ++R + + T DA+ + + + + P ER S Sbjct: 649 RELVYTGITRARDAFTLVTGRTASLADALAHPTHRASGLLERLAPAEGSPPRAPERQRSL 708 Score = 100 bits (248), Expect = 6e-19, Method: Composition-based stats. Identities = 55/511 (10%), Positives = 117/511 (22%), Gaps = 69/511 (13%) Query: 392 VRALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAE 451 + D + P+ A +V + + S+ G G+ A Sbjct: 181 TVRMWLDRLFPADTHASPDSEAAIDW-QKAACAVALRSKLSILT---GGPGTGKTYTAAR 236 Query: 452 LVMMARE-----QGREVQIIAADRRSQMNMKQDERLS----------------------- 483 L+ + + + + A ++ +KQ S Sbjct: 237 LLALLYAVDPAPERLRIALAAPTGKAAARLKQAIETSLTELQDRLGDSLSLGALAAHIGA 296 Query: 484 GELITGRRQL--------LEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLIT 535 + + VIVD+ + L+ LL+ +L+ Sbjct: 297 ARTLHALLGARPDTRAFGFDAAHPLDVDVVIVDEASMIHLEMMAALLEALPTQARVILLG 356 Query: 536 DSGQR--TGTGSALMAMKDAGVNTYRWQGGE--------QRPATIISEPDRNVRYARLAG 585 D Q G+ L + + Q + + Sbjct: 357 DKDQLASVEAGAVLGDLCRHAEHGLYRLSTAAYVEAASGQHIPAAYMGDGPPLAQQTVML 416 Query: 586 DFAASVKAGEESVAQVSGVREQAILTQAIRSELKT-----QGVLGLPEVTMTALSPVWLD 640 + +A + + A +R + G V + Sbjct: 417 RASKRFGGAIGQLALAANRGDSAAAEALLRDDSSPAVAWLDGGSASTAVRLALQGRDAAG 476 Query: 641 SRSRYLRD--------MYRPGMVMEQWNPETRSHDRYVIDRVTAQSH-SLTLRDAQGETQ 691 +Y + E +H + + + A + +GE Sbjct: 477 EAGGVDDAVGAYGGYGVYLTALQARPRGDEAPAHAGWTLAVLRAFERFRVLCAVREGEWG 536 Query: 692 VVRISSLDSSWSLFRPEKM---PVADGERLRVTGKIPGLRVSGGDRLQVASVSEDA--MT 746 + ++ + +G + VT GL V GD + + Sbjct: 537 AMGLNQAIERALVAEGRLTKAGEWYEGRPVIVTRNDAGLGVFNGDIGITLKPAAKGAPLR 596 Query: 747 VVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLA 806 ++ VS ++ G + +A V + + Sbjct: 597 AYFLDGESVRSVAVSRLAHVETAFAMTVHKSQGSEFAHTALVLPREPSRVLTRELVYTGI 656 Query: 807 RSGRDVRLYSSLDETRTAEKLARHPSFTVVS 837 RD + A+ LA Sbjct: 657 TRARDAFTLVTGRTASLADALAHPTHRASGL 687 >UniRef50_Q1EQM4 Putative conjugal transfer protein n=1 Tax=Streptomyces kanamyceticus RepID=Q1EQM4_STRKN Length = 1481 Score = 232 bits (591), Expect = 1e-58, Method: Composition-based stats. Identities = 121/830 (14%), Positives = 255/830 (30%), Gaps = 117/830 (14%) Query: 79 GYDLTFSAPKSVSMMAMLGGDK---RLIDAHNQAVDFAVRQVEALASTRVMT----DGQS 131 G D+T KS S ++ ++ + A ++ +E + + ++ Sbjct: 352 GADVTLDLAKSKSAFLAYAPEEIAAQVEGIYTTAGRESIGALERWTAYAMRGHHGDGEEA 411 Query: 132 ETVLTGNLVMALFNHDTSRD------QEPQLHTHAVVANVTQ-HNGEWKTLSSDKVGKTG 184 E V T + H +R +P H H +AN+ + +G+W T++S Sbjct: 412 EIVKTSGFSGWMMVHRAARPVDGAPYGDPHFHLHFTLANMVKGADGKWSTMASGG----- 466 Query: 185 FIENVYANQIAFGRLYREKLKEQVEA-LGYETEVVGKHGMWEMPGVP---VEAFSGRSQT 240 +++ + A L +++ ++ G + G WE+ +P + FS R Sbjct: 467 --RDLHRHTRATQSLMNARIRRELTDTFGISFRREERTGAWEIAAIPEATIRLFSKRDSQ 524 Query: 241 IREAVGED------ASLKSRDVAALDTRKSKQHVDP----EIKMAEWMQTLKETGFDIRA 290 +R+ + + A+ + R A+ ++ +K ++ A W + G D A Sbjct: 525 VRDLLTKLGIDYDSATTRERTAASTASKAAKNGEAAGVGDDVLRAYWQAEGRAAGDDPDA 584 Query: 291 YRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPE 350 +A + + ++ V GL+ +FT+ +A + LP Sbjct: 585 IAASAME------QDRADQNPTLDELCAQVFDPKTGLTSHSKEFTHAAAIAAVLDALPYG 638 Query: 351 NGVIERARAGIDEAISREQLIPLDREKG--------LFTSGIHVLDELSVRALSRDIMKQ 402 A + + + KG +T+ V E + + + + + Sbjct: 639 VADAAEAEQLTNSVLRQAGYAVQLSPKGAQHFAHAERYTTADVVAAEALIVSEATNRLGT 698 Query: 403 NRVTVHPEK--------------SVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRER 448 V + S + + L + V G G AG+ Sbjct: 699 QAAVVSSDTVDMTLSTVEAQHGGSFTFSDEQRAVLERLLTAGHGIDAVVGIAG-AGKTTI 757 Query: 449 VAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQ--LLEGMAFTPGSTVI 506 + G + + + N+K + + + G T ++ Sbjct: 758 MDTARQAWEAHGLVIAGASTAAVAAANLKAEAGIESRTLASWLTGIRNGGSGLTGVDVLV 817 Query: 507 VDQGEKLSLKETLTLLDGAARHNVQVL-ITDSGQRTGTGSALMAMKDAGVNTYRWQGGEQ 565 VD+ ++ LL AA + +++ I D Q G G Sbjct: 818 VDEAAMCDDRDIAELLTHAAETDTKIVGIGDPKQLHSPG------IGGSFAAVHHIVGGL 871 Query: 566 RPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLG 625 + + D R A ES+ +G L Sbjct: 872 TLSQNFRQKDMVERRALE----LWRDDNRVESLRIFAGTGRVHA--------------LA 913 Query: 626 LPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRD 685 + T+ A+ VW D R+ + D ++ +++ + + +L + Sbjct: 914 DKDATLAAMLTVWADKRAAHTDDHTAVQQLLMLAATNE------IVEELNTGARALRKEN 967 Query: 686 AQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPG--------LRVSGGDRLQV 737 ++ + +++L ++ ++ G+++ + V G R V Sbjct: 968 GD-------LTGPEHAYALPGGGELTLSVGDQVLLRVNDYRGKKSRGASEDVLNGYRGIV 1020 Query: 738 ASVSEDAMTVV-----VPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASV 792 +V E+ +V + L G+ T S + Sbjct: 1021 RAVDEERRVLVEWREKTEDGHRDVAEWIDADYIAQGGLSLGYAITGHKSQGLTVQEALVY 1080 Query: 793 TQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKT 842 A NA ++R + L+ L T ARH EQ+ Sbjct: 1081 GPGAQANALYTMMSRDKAESHLFLPLSVYETDADRARHGDALTDQEQLDR 1130 Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats. Identities = 113/842 (13%), Positives = 212/842 (25%), Gaps = 143/842 (16%) Query: 927 GTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGEL-----------MEKLTSGQRA 975 + AE I+ ++ ++ + QRA Sbjct: 672 HAERYTTADVVAAEALIVSEATNRLGTQAAVVSSDTVDMTLSTVEAQHGGSFTFSDEQRA 731 Query: 976 ATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMR- 1034 +L V G AG GKTT E+ + G A ++ Sbjct: 732 VLERLLTAGHGIDAVVGIAGAGKTTIM----DTARQAWEAHGLVIAGASTAAVAAANLKA 787 Query: 1035 SAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRA 1094 AG++++TLAS+L R+G + + ++DE++M + D+A A + Sbjct: 788 EAGIESRTLASWL----TGIRNGGSGLTGVDVLVVDEAAMCDDRDIAELLTHAAETDTKI 843 Query: 1095 VASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSG 1154 V GD QL + G F + + RQ + L D Sbjct: 844 VGIGDPKQLHSPGIGGSFAAVHHIVGGLT--LSQNFRQKDMVERRALELWRDD------- 894 Query: 1155 LESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVR 1214 + E+ A + + Sbjct: 895 --------------------------NRVESLRIFAGTGRVHALADKDATLAAMLTVWAD 928 Query: 1215 DYTGRTPEAREQTLI--VTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDG 1272 T + + + NE LN+ +R++ G+L + + + Sbjct: 929 KRAAHTDDHTAVQQLLMLAATNEIVEELNTGARALRKENGDLTGPEHAYALPGGGELT-- 986 Query: 1273 ELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLY 1332 L+ V++ + + + +D L + Sbjct: 987 -------LSVGDQVLLRVNDYRGKKSRGASEDVLNGYRG--------------------- 1018 Query: 1333 TPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQ 1392 V D R + + D + A+ Sbjct: 1019 -----IVRAVDEERRVLVEWREKTEDGHRDVAEWIDADYI-----------------AQG 1056 Query: 1393 HIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQG 1452 + L YAIT H +QG + A+ A + Y +SR K ++ Sbjct: 1057 GLSLGYAITGHKSQGLTVQEALVYGPG-------AQANALYTMMSRDKAESHLF------ 1103 Query: 1453 WTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSP 1512 ++ + R R + + + + + P Sbjct: 1104 LPLSVYE----------TDADRARHGDALTDQEQLDRAVSGLIREIENGTEERMILTELP 1153 Query: 1513 ARFIAPGRKYPQ---PYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGEGRVKGSGDA 1569 + + P P D + + P D S A Sbjct: 1154 KNAVPAHVRQAVADLPIPRAPGADEHHDADTPEETPDHEDRPILANAEPTTESATRSEPA 1213 Query: 1570 QFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPGAITGGRVWGDIP 1629 + G S L + IA + R A G + Sbjct: 1214 PTADRPYAHLGNSALR-DAVRKAAIAARATTAAADKAEGAADRAEQEAAAGAGPKSLALQ 1272 Query: 1630 DNSVQPGAGNGEPVTAEVLAQRQAEEAIRRETERRADEIVRKMAENKPDLPDGKTEQAVR 1689 +L AE R + + G+ Sbjct: 1273 RRHQDVAERAVAIREVLLLDGTIAERTARLNGTEARIGGLEQQLAATGRF--GRAALRGD 1330 Query: 1690 EIAGQERDRAAITEREAALPEGVLREPQRVREAVREIARENLLQERLQQMERDMVRDLQK 1749 E A E DR A+ + + + R+++ R+ N + L++ + Q+ Sbjct: 1331 ERAAVEADREALLRTREETVQELEQMDTRLQDVTRQAGPVNEYEAVLREADM-----PQQ 1385 Query: 1750 EK 1751 EK Sbjct: 1386 EK 1387 >UniRef50_A3MYX5 Exodeoxyribonuclease V alpha chain n=11 Tax=Pasteurellaceae RepID=A3MYX5_ACTP2 Length = 645 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 79/566 (13%), Positives = 175/566 (30%), Gaps = 79/566 (13%) Query: 929 GLLVSRASYEAEKSILRHILEGKEAVMPLME-RVPGELMEKLTS------GQRAATRMIL 981 GLL ++AE +I ++++ E + + +++EKL Q+ A + Sbjct: 123 GLLYFYRYWQAENNIANYLVKAVEFPEQIANTALDKQILEKLFEKSDEVNWQKIAVATAI 182 Query: 982 ETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERP---RVVGLGPTHRAVGEMRSAGV 1038 +F+++ G G GKTT +++A+ V + PT +A ++ + Sbjct: 183 --KQKFSIISGGPGTGKTTTVAKLLAALQEKQLRSGKAMLNVALVAPTGKAAARLKESIT 240 Query: 1039 --------------DAQTLASFLHDTQLQQ--RSGETPDFSNTLFLLDESSMVGNTDMAR 1082 A T+ L R L ++DE+SM+ M + Sbjct: 241 LSLSVLNLNFEIPTTASTIHRLLGIRPQSDEPRYHSKNPLHIDLLVVDEASMIDLFLMEK 300 Query: 1083 AYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYS 1142 R + GD DQL ++ G + YS Sbjct: 301 LM-AALKPNTRLIILGDKDQLASVEAGAIMGEL------------------GAFLQQGYS 341 Query: 1143 LINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFP 1202 + D ++ + V + + F + E++ Sbjct: 342 RKHCDYLNQVTEYQLVPKGKSLPICDSLCHLKKSYRFDANSGIGQLAKLVNEKQAVESWQ 401 Query: 1203 DVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVP 1262 + + +Y + +Q I + + ++ ++ L K++ P Sbjct: 402 LFAKGSADLSLIEYAHTSDFPEKQQWIQ----NCVKQITDKAVELYKEYLTLVKQRYNNP 457 Query: 1263 VLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPR 1322 + N +++ R G+ + + I A Sbjct: 458 TKVSVNEIFEVFQKVRFLSALRI----------SELGVEQLNKRIETALAAAK------- 500 Query: 1323 EAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTL-SDGQQTR 1381 + + G + T++ + + + + + D + Sbjct: 501 -------LISLEQSKNYYIGKPLLITQNSPQNHIYSGDIGIILPDENGISRVYFDTKIDD 553 Query: 1382 EIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQ 1441 + AY +T H +QG+ + + + + E Y A++R K+ Sbjct: 554 GYLSLSLNRLPEFEPAYVMTVHKSQGSEFEHTLLITPL--HFAPVMSKELIYTAITRAKK 611 Query: 1442 HVQVYTDNRQGWTDAINNAVQKGTAH 1467 H ++ + +Q W A+NN +Q+ + Sbjct: 612 HFTLFGE-KQVWLQAVNNNLQRQSGL 636 Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats. Identities = 45/417 (10%), Positives = 117/417 (28%), Gaps = 45/417 (10%) Query: 448 RVAELVMMAREQGR---EVQIIAADRRSQMNMKQDERLS-------------GELITGRR 491 +A L G+ V ++A ++ +K+ LS I Sbjct: 204 LLAALQEKQLRSGKAMLNVALVAPTGKAAARLKESITLSLSVLNLNFEIPTTASTIHRLL 263 Query: 492 QLLEGMAFTPG--------STVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR--T 541 + ++VD+ + L L+ + +++ D Q Sbjct: 264 GIRPQSDEPRYHSKNPLHIDLLVVDEASMIDLFLMEKLMAALKPNTRLIILGDKDQLASV 323 Query: 542 GTGSALMAMKDAGVNTYRW-------QGGEQRPATIISEPDRNVRYARLAGDFAASVKAG 594 G+ + + Y Q E + L + +G Sbjct: 324 EAGAIMGELGAFLQQGYSRKHCDYLNQVTEYQLVPKGKSLPICDSLCHLKKSYRFDANSG 383 Query: 595 EESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWL----DSRSRYLRDMY 650 +A++ ++ Q ++ + W+ + ++Y Sbjct: 384 IGQLAKLVNEKQAVESWQLFAKGSADLSLIEYAHTSDFPEKQQWIQNCVKQITDKAVELY 443 Query: 651 RP--GMVMEQWNPETR--SHDRYVIDRVTAQSHSLTLRDAQGETQVVRI-SSLDSSWSLF 705 + +V +++N T+ ++ + + + +L + + E RI ++L ++ + Sbjct: 444 KEYLTLVKQRYNNPTKVSVNEIFEVFQKVRFLSALRISELGVEQLNKRIETALAAAKLIS 503 Query: 706 RPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPF 765 + G+ L +T P + GD + V + + L +S + Sbjct: 504 LEQSKNYYIGKPLLITQNSPQNHIYSGDIGIILPDENGISRVYFDTKIDDGYLSLSLNRL 563 Query: 766 TALKLENGWVETPGHSVSDSATVFAS---VTQMAMDNATLNGLARSGRDVRLYSSLD 819 + T+ + + + R+ + L+ Sbjct: 564 PEFEPAYVMTVHKSQGSEFEHTLLITPLHFAPVMSKELIYTAITRAKKHFTLFGEKQ 620 >UniRef50_A7K3N3 Exodeoxyribonuclease V alpha chain n=60 Tax=Gammaproteobacteria RepID=A7K3N3_VIBSE Length = 715 Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats. Identities = 59/490 (12%), Positives = 136/490 (27%), Gaps = 85/490 (17%) Query: 1005 VMSAVNMLPESERPRVVGLGPTHRAVGEMRSAG------------------VDAQTLASF 1046 + + + + + + PT +A + + ++ TL Sbjct: 278 LAALIEQATHEKNLTIKLVAPTGKAAARLTESIGKAVQELPVSPELKAKIPTESSTLHRL 337 Query: 1047 LHDTQL--QQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQ 1104 L + R + + ++DE+SMV M + + R + GD DQL Sbjct: 338 LGAIPNSAEFRHNKQNPLHLDILVIDEASMVDLPMMYKVVDALPKH-ARLILLGDKDQLA 396 Query: 1105 AIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVP 1164 ++ G + A E A+ L L S Sbjct: 397 SVEAGAVLGDICSFHALGY---------GKEQASAIAKL------TGFDTLAHTGNSASS 441 Query: 1165 RQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAR 1224 + + S + S +LA+A RD++ Sbjct: 442 IADSLCMLQKSYRFDARSGIGQLAKAVNSGSAASVD---------NVWARDFSD------ 486 Query: 1225 EQTLIVTHLNEDRRVLNSMIHDVREKAGE----LGKEQVMVPVLNTANIRDGELRRLSTW 1280 + H + N M+ + ++ G +G+++ ++ L T+ Sbjct: 487 -----IEHFALSSQHYNQMMQTLVQEYGRYLKRIGQQETDPKTGEPESLTHKAKAVLDTF 541 Query: 1281 ETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVG 1340 R + + + + + + + L Sbjct: 542 NQCRLLCAIREGDFGVAGLNQRIEKALAARK-------------------LIQVQDEIWY 582 Query: 1341 TGDRMRFTKSDRERGYVANSVWTVTAVSGDS---VTLSDGQQTREIRPGQEQAEQHIDLA 1397 G + T++D G + + + + ++ + A Sbjct: 583 HGRPVMVTRNDHGLGLYNGDIGICMRDDSEEEPRLKVFFELPDGSVKSVLPSRVPEHETA 642 Query: 1398 YAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAI 1457 YA+T H +QG+ + + + + + E Y ++R K+ + +Y + I Sbjct: 643 YAMTIHKSQGSEFDYTLMILPP--DFSPILTRELIYTGITRAKKRLALYAE-LNVLKRGI 699 Query: 1458 NNAVQKGTAH 1467 + + Sbjct: 700 KVKTTRASGL 709 Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats. Identities = 51/449 (11%), Positives = 121/449 (26%), Gaps = 50/449 (11%) Query: 419 YSDAVSVLAQDRPSLA-IVSGQGGAAGQRERVAELVMMA-REQGREVQIIAADRRSQMNM 476 A +V R ++ G G + +A L+ A E+ ++++A ++ + Sbjct: 247 QKVAAAVALTRRFAVISGGPGTGKTTTVTKLLAALIEQATHEKNLTIKLVAPTGKAAARL 306 Query: 477 KQDER-----------------LSGELITGRRQ--------LLEGMAFTPGSTVIVDQGE 511 + + +++D+ Sbjct: 307 TESIGKAVQELPVSPELKAKIPTESSTLHRLLGAIPNSAEFRHNKQNPLHLDILVIDEAS 366 Query: 512 KLSLKETLTLLDGAARHNVQVLITDSGQR--TGTGSALMAMKD-AGVNTYRWQGGEQRPA 568 + L ++D +H +L+ D Q G+ L + + + Q Sbjct: 367 MVDLPMMYKVVDALPKHARLILLGDKDQLASVEAGAVLGDICSFHALGYGKEQASAIAKL 426 Query: 569 TIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPE 628 T A D ++ A+ + + + + + Sbjct: 427 TGFDTLAHTGNSASSIADSLCMLQKSYRFDARSGIGQLAKAVNSGSAASVDNVWARDFSD 486 Query: 629 VTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQG 688 + ALS + + L Y G +++ + + +T ++ ++ Q Sbjct: 487 IEHFALSSQHYNQMMQTLVQEY--GRYLKRIGQQETDPKTGEPESLTHKAKAVLDTFNQC 544 Query: 689 ET-------------QVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRL 735 RI ++ L + + G + VT GL + GD Sbjct: 545 RLLCAIREGDFGVAGLNQRIEKALAARKLIQVQDEIWYHGRPVMVTRNDHGLGLYNGDIG 604 Query: 736 QVASVSEDA--MTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVF---A 790 + V + + V S + T+ Sbjct: 605 ICMRDDSEEEPRLKVFFELPDGSVKSVLPSRVPEHETAYAMTIHKSQGSEFDYTLMILPP 664 Query: 791 SVTQMAMDNATLNGLARSGRDVRLYSSLD 819 + + G+ R+ + + LY+ L+ Sbjct: 665 DFSPILTRELIYTGITRAKKRLALYAELN 693 >UniRef50_B3EIT2 Helicase, RecD/TraA family n=13 Tax=Bacteria RepID=B3EIT2_CHLL2 Length = 740 Score = 230 bits (585), Expect = 4e-58, Method: Composition-based stats. Identities = 95/667 (14%), Positives = 200/667 (29%), Gaps = 82/667 (12%) Query: 732 GDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFAS 791 G + S E + + GR + S A++ ++++ G ++ + ++ + Sbjct: 125 GVLDILDSNPERLLEIEGIGRKRLELITKSWEEQKAIREIMVFLQSHGVGIARAFRIYKT 184 Query: 792 VTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLET 851 Q A+ + N + D+ L A KL Sbjct: 185 YRQDAIKKVSENPYS-LSLDIDGIGFLTADTIASKLGI---------------------- 221 Query: 852 AISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQ 911 +L H+ + S A L+ E+ + + I + Sbjct: 222 ----AHDSLIRAEAGVRHVLQELASSGHCAVPKERLVQESAAMLD--ISAPIVEEAIAVE 275 Query: 912 IKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPL--------MERVPG 963 + +L+ + G + + AE+ + P + ++ Sbjct: 276 TGKFNLVRETI---DGAEIFYLAPLHRAEEKTAAALAALLRGRTPWKGIDLQKAVVQIAE 332 Query: 964 ELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGL 1023 E +L+ Q+ A ++L ++ TV+ G GVGKTT A++ + +++ Sbjct: 333 ETGLQLSPSQKEALALVLT--NKATVITGGPGVGKTTLVNAILRVIRKKTT----KILLC 386 Query: 1024 GPTHRAVGEMRS-AGVDAQTLASFLHDTQ--LQQRSGETPDFSNTLFLLDESSMVGNTDM 1080 PT RA + G++A+T+ L + + ++DE+SMV M Sbjct: 387 APTGRAAKRLSESTGMEAKTIHRLLEFDPNSGGFKRSSGNPLEADMVVVDETSMVDIVLM 446 Query: 1081 ARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAV 1140 ++ + + + GD DQL ++ PG A V + EI RQ + V Sbjct: 447 SKLLSAV-PAKAALLLVGDADQLPSVGPGAVLTDIIASDAVPVVRLTEIFRQAARSQIIV 505 Query: 1141 YSLI--NRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKG 1198 + N ++ R G E V Q + + A+ Sbjct: 506 NAHRINNGEIPRNAEGEELSDFYVVNSQTPENIHAKLMQMVTERIPARFGFHP------- 558 Query: 1199 EAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQ 1258 VRD TP R E ++ LN + G + Sbjct: 559 --------------VRDIQVLTPMNRGGLGSRALNAELQKALNGSAEPKVSRFGSIFSPG 604 Query: 1259 VMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRL 1318 V + ++ + + + D + + +E + Sbjct: 605 DKVIQMVNNYDKEV--------FNGDIGAITAIDTEESELTVDFDKRPVRYEFSELDELA 656 Query: 1319 ISPREAVAEGVTLYT-PDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDG 1377 ++ ++ + I + ++ V ++ L+ Sbjct: 657 LAYATSIHKSQGSEYLAVVIPLAMQHFTLLERNLIYTAVTRGKKLVVIIAQPKALALAVT 716 Query: 1378 QQTREIR 1384 + + R Sbjct: 717 NRKADRR 723 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 74/681 (10%), Positives = 180/681 (26%), Gaps = 94/681 (13%) Query: 192 NQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPV---EAFSGRS------QTIR 242 G Y +KL ++ + + E+ G+ E + + I Sbjct: 106 MVKGVGSFYAKKLVKKFGTGVLDILDSNPERLLEIEGIGRKRLELITKSWEEQKAIREIM 165 Query: 243 EAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLR 302 + +R T + + + + DI AD Sbjct: 166 VFLQSHGVGIARAFRIYKTY-------RQDAIKKVSENPYSLSLDIDGI---GFLTADTI 215 Query: 303 TLTPGPASQDGPDVQQAVTQAIAGL-SERKVQFTYTDVLARTVGILPPENGVIERARAGI 361 G A + V + L S ++ + +L ++E I Sbjct: 216 ASKLGIAHDSLIRAEAGVRHVLQELASSGHCAVPKERLVQESAAMLDISAPIVEE---AI 272 Query: 362 DEAISREQLIP--LDREKGLFTSGIHVLDELSVRALSRDIMKQ----------NRVTVHP 409 + L+ +D + + + +H +E + AL+ + + V + Sbjct: 273 AVETGKFNLVRETIDGAEIFYLAPLHRAEEKTAAALAALLRGRTPWKGIDLQKAVVQIAE 332 Query: 410 EKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAAD 469 E + + +A++++ ++ ++ G G+ V ++ + R++ ++ + A Sbjct: 333 ETGLQLSPSQKEALALVLTNKATVIT---GGPGVGKTTLVNAILRVIRKKTTKILLCAPT 389 Query: 470 RRSQMNMKQDERLSGELITGRRQLLE--------GMAFTPGSTVIVDQGEKLSLKETLTL 521 R+ + + + + I + V+VD+ + + L Sbjct: 390 GRAAKRLSESTGMEAKTIHRLLEFDPNSGGFKRSSGNPLEADMVVVDETSMVDIVLMSKL 449 Query: 522 LDGAARHNVQVLITDSGQR--TGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVR 579 L +L+ D+ Q G G+ L + + R A R Sbjct: 450 LSAVPAKAALLLVGDADQLPSVGPGAVLTDIIASDAVPVVRLTEIFRQAARSQIIVNAHR 509 Query: 580 YARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWL 639 I +G + + +P + Sbjct: 510 IN-----------------------------NGEIPR--NAEGEELSDFYVVNSQTPENI 538 Query: 640 DSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLD 699 + ++ + P +V + L ++ + + Sbjct: 539 ---------HAKLMQMVTERIPARFGFHPVRDIQVLTPMNRGGLGSRALNAELQKALNGS 589 Query: 700 SSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLP 759 + + R + + G+++ V GD + ++ + + V P + Sbjct: 590 AEPKVSRFGSI-FSPGDKVIQMVNNYDKEVFNGDIGAITAIDTEESELTVDFDKRP--VR 646 Query: 760 VSDSPFTALKLENGWVETPGHSVSDSATVFA---SVTQMAMDNATLNGLARSGRDVRLYS 816 S L L A V + N + R + V + + Sbjct: 647 YEFSELDELALAYATSIHKSQGSEYLAVVIPLAMQHFTLLERNLIYTAVTRGKKLVVIIA 706 Query: 817 SLDETRTAEKLARHPSFTVVS 837 A + Sbjct: 707 QPKALALAVTNRKADRRMTTL 727 Score = 108 bits (270), Expect = 2e-21, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 48/129 (37%), Gaps = 3/129 (2%) Query: 1339 VGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAY 1398 GD++ ++ ++ + +TA+ + L+ R +R + ++ + LAY Sbjct: 601 FSPGDKVIQMVNNYDKEVFNGDIGAITAIDTEESELTVDFDKRPVRYEFSELDE-LALAY 659 Query: 1399 AITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAIN 1458 A + H +QG+ + + + Y A++R K+ V + + N Sbjct: 660 ATSIHKSQGSE--YLAVVIPLAMQHFTLLERNLIYTAVTRGKKLVVIIAQPKALALAVTN 717 Query: 1459 NAVQKGTAH 1467 + Sbjct: 718 RKADRRMTT 726 >UniRef50_A7FFE8 Exodeoxyribonuclease V, alpha subunit n=30 Tax=Enterobacteriaceae RepID=A7FFE8_YERP3 Length = 657 Score = 230 bits (585), Expect = 4e-58, Method: Composition-based stats. Identities = 80/587 (13%), Positives = 175/587 (29%), Gaps = 80/587 (13%) Query: 921 DVAKGYGTGLLVSRASYEAEKSILRHI-------------LEGKEAVMPLMERVPGELME 967 L + ++ E +++ I + K + E + E ++ Sbjct: 101 PTPLVLQQERLYLQRMWQYEGDVVQFIASDSVFINRDSDFMTSKGIATSVDESLLRETLD 160 Query: 968 KLT-------SGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRV 1020 L Q+ A + R +V+ G G GKTT +++A+ + + +R R+ Sbjct: 161 ALFGYAGSEVDWQKVAAAVAAT--RRISVISGGPGTGKTTTVAKLLTALIRISQGQRLRI 218 Query: 1021 VGLGPTHRAVGEMRSAGV------------------DAQTLASFLHDTQ--LQQRSGETP 1060 PT +A + + A TL L + R Sbjct: 219 QLAAPTGKAAARLTESLGKAIRQFSLTDDERKLFPDQASTLHRLLGVQPNSQRLRYHRGN 278 Query: 1061 DFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSA 1120 + + ++DE+SMV MAR + + GD DQL ++ G Sbjct: 279 PLNLDVLVVDEASMVDLPMMARLI-AALPAKAKVIFLGDRDQLASVEAGAVLGDICR--- 334 Query: 1121 ADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFS 1180 A + ++ +L + L+ + + +V S V + +S Sbjct: 335 --FAELGYSEQRAQQLTQLTGYLLTNNALTS-----NVLASNVLTNKALANKAQPDETYS 387 Query: 1181 HSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVL 1240 S + + + + + + +Y L + + +R L Sbjct: 388 DSANVRDSLCLLRKSYRFDEKSGIGQLALAVNAGEY-----RQALSVLNSAYSDVERFPL 442 Query: 1241 NSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGI 1300 Q + + L ++ L + + ++G+ Sbjct: 443 ADEEDYQVLLEACAVGYQHYLERVAALAPAAEVLAAFGRYQ----LLCALRSGPFGVSGL 498 Query: 1301 SKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANS 1360 ++ + + + + + R G + +D G Sbjct: 499 NERIEQVLHRKG---------------FIIRPSGPSGRWYVGRPVMIELNDSALGLFNGD 543 Query: 1361 VWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTE 1420 + + + + I+ Q + AYA+T H +QG+ + Sbjct: 544 IGIALHDNEGELRVYFQLPDGNIKSVQPSRLPSHETAYAMTVHKSQGSEFEHTALVLPNT 603 Query: 1421 GNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAH 1467 + E Y A++R +QH+ +Y + + AI + + Sbjct: 604 --FMPVLTRELVYTAITRARQHLTLYCSD-AVLSHAIRTPTLRLSGL 647 Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats. Identities = 42/444 (9%), Positives = 105/444 (23%), Gaps = 77/444 (17%) Query: 448 RVAELVMMAREQGREVQIIAADRRSQMNMKQDER-----------------LSGELITGR 490 + L+ +++ Q +Q+ A ++ + + + Sbjct: 203 LLTALIRISQGQRLRIQLAAPTGKAAARLTESLGKAIRQFSLTDDERKLFPDQASTLHRL 262 Query: 491 RQLLEGMAFTPG--------STVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTG 542 + ++VD+ + L L+ A +V+ + Sbjct: 263 LGVQPNSQRLRYHRGNPLNLDVLVVDEASMVDLPMMARLI-AALPAKAKVIFLGDRDQLA 321 Query: 543 TGSALMAM------------------------------------KDAGVNTYRWQGGEQR 566 + A + + V T + + + Sbjct: 322 SVEAGAVLGDICRFAELGYSEQRAQQLTQLTGYLLTNNALTSNVLASNVLTNKALANKAQ 381 Query: 567 PATIISEPDR-NVRYARLAGDFAASVKAGEESVAQVSGVRE-QAILTQAIRSELKTQGVL 624 P S+ L + K+G +A E + L+ + + Sbjct: 382 PDETYSDSANVRDSLCLLRKSYRFDEKSGIGQLALAVNAGEYRQALSVLNSAYSDVERFP 441 Query: 625 GLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRY-VIDRVTAQSHSLTL 683 E L L++ + + + + RY ++ + + ++ Sbjct: 442 LADEEDYQVL----LEACAVGYQHYLERVAALAPAAEVLAAFGRYQLLCALRSGPFGVSG 497 Query: 684 RDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSED 743 + + E + R + G + + L + GD +E Sbjct: 498 LNERIEQVLHRKGFIIRPSGPSGR----WYVGRPVMIELNDSALGLFNGDIGIALHDNEG 553 Query: 744 AMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAM---DNA 800 + V + V S + + T Sbjct: 554 ELRVYF-QLPDGNIKSVQPSRLPSHETAYAMTVHKSQGSEFEHTALVLPNTFMPVLTREL 612 Query: 801 TLNGLARSGRDVRLYSSLDETRTA 824 + R+ + + LY S A Sbjct: 613 VYTAITRARQHLTLYCSDAVLSHA 636 >UniRef50_C6RJX0 Putative MobA/MobL protein n=1 Tax=Acinetobacter radioresistens SK82 RepID=C6RJX0_ACIRA Length = 972 Score = 230 bits (585), Expect = 4e-58, Method: Composition-based stats. Identities = 106/746 (14%), Positives = 207/746 (27%), Gaps = 161/746 (21%) Query: 751 GRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGR 810 + + + S ++ V+ + + + R Sbjct: 117 DGEQNPHIHLMFSERKLDGIDRDEVQHFKRYNPTNPEKGGAGKDRYFSSKVFVADIRLSW 176 Query: 811 DVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHL 870 + + ++ E + + Q + Sbjct: 177 ANHVNDFCENLGLDARIDHRSYKAQGLELSSQNFRADYVSNHKYFINENIKNIRHQNGEI 236 Query: 871 ALPVVES-------KKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVA 923 + + F+ DL + + A + + Sbjct: 237 IIERPSEVIRALTSNQSVFTARDLERFVMAHTDSQ------EQYLKAYEAVMTCPDMAML 290 Query: 924 KGYGTGLLVSRASYEAEKSILRHILEGKEAVM----------PLMERVPGELMEKLTSGQ 973 G + S+ E SI I E + V Q Sbjct: 291 FGKDKVVFSSKELVGIEDSITAFIYNANEQSRVQKPFNLTEKFTLNAVKIADKRTFNREQ 350 Query: 974 RAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM 1033 A L ++DR +++ G AG GK+ AV A ++ +V G+ + Sbjct: 351 -EAAYYTLTSTDRISLLNGSAGTGKSYVLSAVSEAF----KTSDYKVHGIALQAITARAI 405 Query: 1034 RS-AGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGG 1092 + + T+ASFL + SG + T+ +LDE+ MVG+ DM + ++ Sbjct: 406 SDDCNIPSSTIASFLA----RYESGNFEINNKTVLILDEAGMVGSRDMQKLLMIVEKHDA 461 Query: 1093 RAVASGDTDQLQAIAPGQPFRLQQTR-SAADVAIMKEIVRQT-----PELREAVYSLINR 1146 + GD+ QL A++ G F Q ++A +++I RQ ++ EA L Sbjct: 462 QIKLVGDSYQLSAVSAGSAFAHIQDNLDKKNIASLEDIQRQKYAKESEKMIEASKLLSKH 521 Query: 1147 DVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPM 1206 +V++AL +++ Sbjct: 522 EVDKALDIYKTINAVNEYESHDL------------------------------------- 544 Query: 1207 TLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGK-EQVMVPVLN 1265 A+ + + ++ + L++ H N D LN M +V K G+L + Sbjct: 545 ----ALAKTIKSWSEDSSKNKLMLAHSNNDVNELNRMARNVLIKNGQLSATGNHVKTAFG 600 Query: 1266 TANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAV 1325 I GE ++ + L + + ++ G KD+ Sbjct: 601 DIEITVGEKIV---FKQNDSKLKVSNGETAKVIGFDKDN--------------------- 636 Query: 1326 AEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRP 1385 + +SD+ N + V Sbjct: 637 --------------LNNIKFMMVQSDK-----NNEIIKV--------------------- 656 Query: 1386 GQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQV 1445 YA T H +QG + A + YVAL+R K +V++ Sbjct: 657 -DLNEYNKFKYGYANTIHSSQGMTVDNAYIVASENM------NANLTYVALTRHKYNVEI 709 Query: 1446 ------YTDNRQGWTDAINNAVQKGT 1465 +T N + + + K + Sbjct: 710 NYSAMSFTTNEKEF---VKRPDGKIS 732 Score = 183 bits (463), Expect = 7e-44, Method: Composition-based stats. Identities = 87/777 (11%), Positives = 219/777 (28%), Gaps = 116/777 (14%) Query: 233 AFSGR------SQTIREAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQT----LK 282 FS R ++ + + + A D R V W + Sbjct: 127 MFSERKLDGIDRDEVQHFKRYNPTNPEKGGAGKD-RYFSSKVFVADIRLSWANHVNDFCE 185 Query: 283 ETGFDIRAYRDAADQRADLRTLT------------------PGPASQDGPDVQQAVTQAI 324 G D R + + + Q+G + + ++ I Sbjct: 186 NLGLDARIDHRSYKAQGLELSSQNFRADYVSNHKYFINENIKNIRHQNGEIIIERPSEVI 245 Query: 325 AGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPL-DREKGLFTSG 383 L+ + FT D+ + + E+ + ++ + L ++K +F+S Sbjct: 246 RALTSNQSVFTARDLERFVMAHTDSQ----EQYLKAYEAVMTCPDMAMLFGKDKVVFSSK 301 Query: 384 IHVLDELSVRALSRDIMKQNRVTVH--PEKSVPRTA----------GYSDAVSVLAQDRP 431 V E S+ A + +Q+RV + A +A Sbjct: 302 ELVGIEDSITAFIYNANEQSRVQKPFNLTEKFTLNAVKIADKRTFNREQEAAYYTLTSTD 361 Query: 432 SLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRR 491 +++++G G G+ ++ + + +V IA + + D + I Sbjct: 362 RISLLNGSAG-TGKSYVLSAVSEAFKTSDYKVHGIALQAITARAISDDCNIPSSTIASFL 420 Query: 492 QLLEGMAFT--PGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR---TGTGSA 546 E F + +I+D+ + ++ LL +H+ Q+ + + GSA Sbjct: 421 ARYESGNFEINNKTVLILDEAGMVGSRDMQKLLMIVEKHDAQIKLVGDSYQLSAVSAGSA 480 Query: 547 LMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVRE 606 ++D + + E ++ + ++L E Sbjct: 481 FAHIQDNLDKKNIASLEDIQRQKYAKESEKMIEASKLLSKHEVDKALDIYKTINAVNEYE 540 Query: 607 QAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSH 666 L A+ +K+ M A S ++ Sbjct: 541 SHDL--ALAKTIKSWSEDSSKNKLMLAHSNNDVN-------------------------- 572 Query: 667 DRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPG 726 + + ++ +++ Q + + + E ++ Sbjct: 573 ------ELNRMARNVLIKNGQLSATGNHVKTAFGDIEITVGE--------KIVFKQNDSK 618 Query: 727 LRVSGGDRLQVASVSEDAMT----VVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSV 782 L+VS G+ +V +D + ++V + V + + K + Sbjct: 619 LKVSNGETAKVIGFDKDNLNNIKFMMVQSDKNNEIIKVDLNEYNKFKYGYANTIHSSQGM 678 Query: 783 SDSATVFASVTQMAMDNATLNGLARSGRDVRL------YSSLDETRTAEKLARHPSFTVV 836 + + ++ N T L R +V + +++ ++ + Sbjct: 679 TVDNAYIVA-SENMNANLTYVALTRHKYNVEINYSAMSFTTNEKEFVKRPDGKISYDQNY 737 Query: 837 SEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALP-----VVESKKLAFSMVDLL--- 888 + K + + + + + + + + + ++ Sbjct: 738 NPVEKEVTPFENFKKVLGRSEKKEFSTDFTLVDKQEKLIKAYLQDHRHHIEDKREIYGIN 797 Query: 889 --TEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSI 943 A + A E+ E+ A +K +L ++ G + + E+ + Sbjct: 798 SKIHALTSANRTFTKEEIVTEVRANLKSKSILGDEIGSIRGM-KIAKGELLKLEEGL 853 >UniRef50_B7KWK3 Helicase, RecD/TraA family n=16 Tax=Bacteria RepID=B7KWK3_METC4 Length = 750 Score = 229 bits (584), Expect = 6e-58, Method: Composition-based stats. Identities = 101/669 (15%), Positives = 199/669 (29%), Gaps = 79/669 (11%) Query: 736 QVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQM 795 + + + M V G + + A++ ++ G + + +F + Sbjct: 131 IIEAEPDRLMEVGGIGPKRAERIVRGWAEQKAVREIMLFLHAHGVGTARAVRIFKTYGHE 190 Query: 796 AMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISH 855 ++ T + R RD+R A KL Sbjct: 191 SIKVMTEDPY-RLARDIRGIGFKTADAIAMKLGLTKEAPQRLR----------------- 232 Query: 856 QKSALHTPAQQAIHLALPV-VESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKR 914 + AL ++ A + L A+ + + +I+R Sbjct: 233 ----------AGVSFALQTAMDEGHCALPVARLTELAQKLL--EVEAPLIRSAVAEEIER 280 Query: 915 GDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPL--------MERVPGELM 966 GD + D+ + R + AE+ I ++E P + V + Sbjct: 281 GDEVIQDIIGDQAC--VFLRGLHAAERGIADRLIERASGTPPWSEIDLGKALPWVEQKTG 338 Query: 967 EKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPT 1026 + L+ Q A R++L + + V+ G GVGKT+ +V+ + +++ V+ PT Sbjct: 339 KALSPSQAEAVRLLLAS--KLCVITGGPGVGKTSTLDSVLRIL----QAKGVHVLLAAPT 392 Query: 1027 HRAVGEMRS-AGVDAQTLASFLHDTQ--LQQRSGETPDFSNTLFLLDESSMVGNTDMARA 1083 RA M G++A+T+ L E + L ++DE+SMV M Sbjct: 393 GRAAKRMTEQTGLEAKTIHRLLEIDPKHGGFTRDEESPLNCDLLVIDETSMVDVPLMNAL 452 Query: 1084 YALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSL 1143 + + GD DQL ++ PGQ VA + E+ RQ E R V + Sbjct: 453 LKAVPPR-AGLLLVGDVDQLPSVGPGQVLADVIASERVPVARLTEVFRQAAESRIIVNAH 511 Query: 1144 INRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPD 1203 + R + + E + + F Sbjct: 512 RINHGQ------------MPERPRPGEKADFYLIEIDDPEVGVGKLIEIVTRRIPRTFGL 559 Query: 1204 VPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPV 1263 P+ + + TP R R LN + V E+ Sbjct: 560 DPLRDVQVL-------TPMQRGSLGS--------RNLNHELQRVLNPNPPAQVERFGWRF 604 Query: 1264 LNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPRE 1323 + + + +V + ++ DD + E +T + + Sbjct: 605 APGDRVMETQNDYDREVFNGDLGMVARIDDDEGAVIVTFDDREVIYPFGELDTLVPAFAT 664 Query: 1324 AVAEGVTLYTPD-TIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTRE 1382 + + P I + T ++ G V ++ ++ + Sbjct: 665 TIHKSQGSEYPAVVIPIVTQHFNMLARNLLYTGVTRGKQLVVLIGQRKAIGMAVRSGQTK 724 Query: 1383 IRPGQEQAE 1391 R + + Sbjct: 725 RRFTKLREW 733 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 92/683 (13%), Positives = 183/683 (26%), Gaps = 95/683 (13%) Query: 194 IAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVEAFSG--RS-------QTIREA 244 G +++ +E + E+ G+ + R + I Sbjct: 110 RGIGPAMAKRIVALFGESTFEIIEAEPDRLMEVGGIGPKRAERIVRGWAEQKAVREIMLF 169 Query: 245 VGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTL 304 + +R V T H ++ + + ++ R + AD + Sbjct: 170 LHAHGVGTARAVRIFKT---YGHESIKVMTEDPYRLARD-------IRGIGFKTADAIAM 219 Query: 305 TPGPASQDGPDVQQAVTQAIA-GLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDE 363 G + ++ V+ A+ + E + +L E + R+ + E Sbjct: 220 KLGLTKEAPQRLRAGVSFALQTAMDEGHCALPVARLTELAQKLLEVEAPL---IRSAVAE 276 Query: 364 AISREQLIPLDRE--------KGLFTSGIHVLDELSVRA-----LSRDIMKQNRVTVHPE 410 I R + D +GL + + D L RA S + + V + Sbjct: 277 EIERGDEVIQDIIGDQACVFLRGLHAAERGIADRLIERASGTPPWSEIDLGKALPWVEQK 336 Query: 411 KSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADR 470 + ++AV +L + V G G+ + ++ + + +G V + A Sbjct: 337 TGKALSPSQAEAVRLLLASK---LCVITGGPGVGKTSTLDSVLRILQAKGVHVLLAAPTG 393 Query: 471 RSQMNMKQDERLSGELITGRRQL--------LEGMAFTPGSTVIVDQGEKLSLKETLTLL 522 R+ M + L + I ++ + + +++D+ + + LL Sbjct: 394 RAAKRMTEQTGLEAKTIHRLLEIDPKHGGFTRDEESPLNCDLLVIDETSMVDVPLMNALL 453 Query: 523 DGAARHNVQVLITDSGQR--TGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRY 580 +L+ D Q G G L + + R A R Sbjct: 454 KAVPPRAGLLLVGDVDQLPSVGPGQVLADVIASERVPVARLTEVFRQAAESRIIVNAHRI 513 Query: 581 ARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLD 640 G + GE++ + + PEV + L + Sbjct: 514 NH--GQMPERPRPGEKADFYLI--------------------EIDDPEVGVGKLIEIVTR 551 Query: 641 SRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDS 700 R + + + S L + Sbjct: 552 RIPRTFG-------------LDPLRDVQVLTPMQRGSLGSRNLNHELQRVLNPNPPAQVE 598 Query: 701 SWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPV 760 + A G+R+ T V GD VA + +D V+V + + Sbjct: 599 RF------GWRFAPGDRVMETQNDYDREVFNGDLGMVARIDDDEGAVIV--TFDDREVIY 650 Query: 761 SDSPFTALKLENGWVETPGHSVSDSATVFASVTQ---MAMDNATLNGLARSGRDVRLYSS 817 L A V VTQ M N G+ R + V L Sbjct: 651 PFGELDTLVPAFATTIHKSQGSEYPAVVIPIVTQHFNMLARNLLYTGVTRGKQLVVLIGQ 710 Query: 818 LDETRTAEKLARHPSFTVVSEQI 840 A + + + Sbjct: 711 RKAIGMAVRSGQTKRRFTKLREW 733 Score = 110 bits (273), Expect = 7e-22, Method: Composition-based stats. Identities = 33/235 (14%), Positives = 67/235 (28%), Gaps = 16/235 (6%) Query: 1229 IVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWE------- 1281 ++ L + E + ++ + R GE E Sbjct: 483 VIASERVPVARLTEVFRQAAESRIIVNAHRINHGQM-PERPRPGEKADFYLIEIDDPEVG 541 Query: 1282 THRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDT----- 1336 + ++ + D + G+ + + + P Sbjct: 542 VGKLIEIVTRRIPRTFGLDPLRDVQVLTPMQRGSLGSRNLNHELQRVLNPNPPAQVERFG 601 Query: 1337 IRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDL 1396 R GDR+ T++D +R + V + D + RE+ + + Sbjct: 602 WRFAPGDRVMETQNDYDREVFNGDLGMVARIDDDEGAVIVTFDDREVIYPFGE-LDTLVP 660 Query: 1397 AYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQ 1451 A+A T H +QG+ + T M Y ++R KQ V + + Sbjct: 661 AFATTIHKSQGSEYPAVVIPIVT--QHFNMLARNLLYTGVTRGKQLVVLIGQRKA 713 >UniRef50_A1TWJ9 Exodeoxyribonuclease V, alpha subunit n=2 Tax=Marinobacter RepID=A1TWJ9_MARAV Length = 750 Score = 229 bits (583), Expect = 8e-58, Method: Composition-based stats. Identities = 112/746 (15%), Positives = 219/746 (29%), Gaps = 96/746 (12%) Query: 792 VTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLET 851 + A L ++G L + + S + + Sbjct: 38 LAHPDDTEALLGQWQQAGWIRPLDTGFARLIRELSEEQGDSPQPLVLLLAALTSHQVGRG 97 Query: 852 AISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQ 911 + + L A Q + ALP E S ++ + E +L + A Sbjct: 98 HVCIDLATLLADAGQTL--ALPPEEPANTGLSESEVANLQGRYPQELLSRVQLTDCLAAL 155 Query: 912 IKRGDLLY--VDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKL 969 + V L R + E+ I I + + A+ + + L Sbjct: 156 QGSLAVSDGSVPAPLVLNGTRLYLRRFWRYEQRIAEGIQQ-RLALPSPLADPQSAASQTL 214 Query: 970 T-------------SGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPES- 1015 + Q+ A L +RF V+ G G GKTT +++A+ + Sbjct: 215 STALSKLFRSTAPVDYQKLAC--ALAARNRFAVITGGPGTGKTTTVVNLLAALQAVAGES 272 Query: 1016 -----ERPRVVGLGPTHRAVGEMRSAGVDA----------------------QTLASFLH 1048 + R+ PT +A + + A TL L Sbjct: 273 PERAGRKYRIRLAAPTGKAAARLNESIGGAVSKLPLADLPGSVKLEDIPTKVTTLHRLLG 332 Query: 1049 DTQ--LQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAI 1106 Q R + ++DE+SMV MA + + + GD DQL ++ Sbjct: 333 SRPDTRQFRHHRDNPLLVDILVIDEASMVDVDLMASVFD-ALPASAQLILLGDKDQLASV 391 Query: 1107 APGQPFRLQQTRSAADVAIMKEIVR-----QTPELREAVYSLINRDVERALSGLESVKPS 1161 G R+ D + R ++ +++ + +++A++ L Sbjct: 392 DAGAVLGELCQRA-LDAHYTPDTARWLAAITGAQVPDSLVDNSGQPLDQAVAMLRKSYRF 450 Query: 1162 QVPRQEGAWAPEHSVTEFSHSQEAKLAEA--QQKAMLKGEAFPDVPMTLYEAIVRDYTGR 1219 A + +E + ++ +A L G+ P E I Sbjct: 451 GQDSGIRQLAESVNSSELTSQVLGQIRDAGFDDVIWLNGQTPKPDPDQTLELICHHAITG 510 Query: 1220 TPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLST 1279 +PEA + +N + + V+++ ++ G R + Sbjct: 511 SPEAFRNAGLGRVVNGEVLPTPVGYR-------------HYLEVIHSCDLTAGSPR--AA 555 Query: 1280 WETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRV 1339 W+ H ++ N + + + K + + A T Sbjct: 556 WDAHAAEVLEAFNDFQVLCALRKGPWGVEGLNQR---------IAQQLLAEKLIDKTEGW 606 Query: 1340 GTGDRMRFTKSDRERGYVANSVWTVTAVSGDS-----------VTLSDGQQTREIRPGQE 1388 G + T +D G + + V D V G T IR Sbjct: 607 YAGRPVLVTGNDYNLGLMNGDIGITFNVPWDRAANGEPKQTLRVAFPSGDSTGGIRWISP 666 Query: 1389 QAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTD 1448 Q ++ YA+T H +QG+ + + E Y ++R K + T Sbjct: 667 SRLQQLETVYAMTVHKSQGSEFNHTCLVLPDRL--SPVLTKELVYTGITRAKDWFSLITG 724 Query: 1449 NRQGWTDAINNAVQKGTAHDVFEPKP 1474 + Q + D++ V + + + + Sbjct: 725 DAQVFKDSVGQQVVRASGLALRLGEQ 750 Score = 95.1 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 61/563 (10%), Positives = 133/563 (23%), Gaps = 112/563 (19%) Query: 371 IPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYS---------- 420 PL E + + + P+ + +T + Sbjct: 168 APLVLNGTRLYLRRFWRYEQRIAEGIQQRLALPSPLADPQSAASQTLSTALSKLFRSTAP 227 Query: 421 ---DAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQG---------REVQIIAA 468 ++ R A+++G G V L + G +++ A Sbjct: 228 VDYQKLACALAARNRFAVITGGPGTGKTTTVVNLLAALQAVAGESPERAGRKYRIRLAAP 287 Query: 469 DRRSQMNMKQDER---------------------LSGELITGRRQLLEGMAFTPG----- 502 ++ + + + Sbjct: 288 TGKAAARLNESIGGAVSKLPLADLPGSVKLEDIPTKVTTLHRLLGSRPDTRQFRHHRDNP 347 Query: 503 ---STVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR--TGTGSALMAMKDAGV-- 555 +++D+ + + ++ D +L+ D Q G+ L + + Sbjct: 348 LLVDILVIDEASMVDVDLMASVFDALPASAQLILLGDKDQLASVDAGAVLGELCQRALDA 407 Query: 556 ----NTYRWQGGEQRPATIISEPDR-----NVRYARLAGDFAASVKAGEESVAQVSGVRE 606 +T RW S D + A L + +G +A+ E Sbjct: 408 HYTPDTARWLAAITGAQVPDSLVDNSGQPLDQAVAMLRKSYRFGQDSGIRQLAESVNSSE 467 Query: 607 -QAILTQAIRSE-------LKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQ 658 + + IR L Q P+ T+ + + R+ G V+ Sbjct: 468 LTSQVLGQIRDAGFDDVIWLNGQTPKPDPDQTLELICHHAITGSPEAFRNAG-LGRVVNG 526 Query: 659 WNPETRSHDRYVIDRVT-----------------------AQSHSLTLRDAQGETQVVRI 695 T R+ ++ + + +G V + Sbjct: 527 EVLPTPVGYRHYLEVIHSCDLTAGSPRAAWDAHAAEVLEAFNDFQVLCALRKGPWGVEGL 586 Query: 696 SSLDSSWSLFRP---EKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAM------- 745 + + L + G + VTG L + GD +V D Sbjct: 587 NQRIAQQLLAEKLIDKTEGWYAGRPVLVTGNDYNLGLMNGDIGITFNVPWDRAANGEPKQ 646 Query: 746 ---TVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFAS---VTQMAMDN 799 G + +S S L+ + T ++ + Sbjct: 647 TLRVAFPSGDSTGGIRWISPSRLQQLETVYAMTVHKSQGSEFNHTCLVLPDRLSPVLTKE 706 Query: 800 ATLNGLARSGRDVRLYSSLDETR 822 G+ R+ L + + Sbjct: 707 LVYTGITRAKDWFSLITGDAQVF 729 >UniRef50_A8EUL3 Exodeoxyribonuclease V, alpha subunit n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EUL3_ARCB4 Length = 775 Score = 229 bits (583), Expect = 8e-58, Method: Composition-based stats. Identities = 87/587 (14%), Positives = 169/587 (28%), Gaps = 88/587 (14%) Query: 882 FSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEK 941 F + LL E+ F+ + + I+ + +L + Y AEK Sbjct: 237 FHLYKLLDESLRFSNQELLY---ESAISKMLVDEELFVT------SENRVALSMLYYAEK 287 Query: 942 SILRHILEGKE--------AVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGY 993 IL K+ + + + L +L+ Q+ A +I + ++ + GY Sbjct: 288 RILEFFSRRKDEKNKKIIASFDEYLVKKQETLGFELSVEQKKAVELI-NSGEKTLFLIGY 346 Query: 994 AGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA-GVDAQTLASFLHDTQL 1052 AG GK+T RA++ + + + ++ + + A + G ++ T+ S L Sbjct: 347 AGTGKSTSSRAILELLEEIMSYDD--IMTIALSGIASQRISDTTGYNSSTIQSLLV---- 400 Query: 1053 QQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPF 1112 + E F LLDE+SMV + + + I + GD QL AI G Sbjct: 401 --KHKEKDFFPYKAILLDEASMVNSVTFYQIISKIDDDTI-FIIVGDDGQLPAIGAGNIL 457 Query: 1113 RLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAP 1172 A + + +I RQ AV + R E + + + Sbjct: 458 ADAIKYELAPICKLTKIYRQNENQAIAVIANDIRRGEIPSYKEDYEDFRFIDVSIANYYA 517 Query: 1173 EHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTH 1232 + + + + ++ Y+ I + + + + Sbjct: 518 MKNSVSSNDFADLRGENSEYILNNILNISSTYIQDYYDFIKKKKISKALTLFQVITPMKG 577 Query: 1233 LNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDN 1292 LN + + N G+ +E Sbjct: 578 GVLGVDNLNIQLQKLF-------------------NHTKGKAFASKIYEY---------- 608 Query: 1293 VYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDR 1352 +T + + + RV G K D Sbjct: 609 -------------KLTDKVIHIKNENMKAQTMSMYKSGSTDFLERRVYNGQLGLIIKLD- 654 Query: 1353 ERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETF 1412 + + + E + LAY +T H QG Sbjct: 655 --------------FEEEKCIVLYPNDDMVVFYDFENVHHLLSLAYCLTIHKTQGMEYDN 700 Query: 1413 AIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINN 1459 A L + +M + Y A++R K+ + + + + A Sbjct: 701 A--LIPMSFSHYIMHNTKLLYTAITRAKKMCFIVGE-EEAFKSACKK 744 Score = 143 bits (360), Expect = 6e-32, Method: Composition-based stats. Identities = 48/592 (8%), Positives = 141/592 (23%), Gaps = 61/592 (10%) Query: 273 KMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLS--ER 330 ++ ++ +K+ + + + +RAD + G + + + + Sbjct: 171 EVENLIEKIKQNPYILINIKGIGFKRADEIAKSLGIDPKSEFRIMACLNYTLREFCDNNG 230 Query: 331 KVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDEL 390 + L N + + I + + E+L + + E Sbjct: 231 NSSIDKFHLYKLLDESLRFSNQEL-LYESAISKMLVDEELFVTSENRVALSM--LYYAEK 287 Query: 391 SVRALSRDIMKQN-----------RVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQ 439 + + V + AV ++ +L ++ G Sbjct: 288 RILEFFSRRKDEKNKKIIASFDEYLVKKQETLGFELSVEQKKAVELINSGEKTLFLI-GY 346 Query: 440 GGAAGQRERVAELVMMARE-QGRE-VQIIAADRRSQMNMKQDERLSGELITGRRQLLEGM 497 G G+ ++ + E + + IA + + + I + Sbjct: 347 AG-TGKSTSSRAILELLEEIMSYDDIMTIALSGIASQRISDTTGYNSSTIQSLLVKHKEK 405 Query: 498 AFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR--TGTGSALMAMKDAGV 555 F P +++D+ ++ ++ + +++ D GQ G G+ L + Sbjct: 406 DFFPYKAILLDEASMVNSVTFYQIISKIDDDTIFIIVGDDGQLPAIGAGNILADAIKYEL 465 Query: 556 NTYRWQGGEQRPATIISEP--DRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQA 613 R + ++R + + + + + Sbjct: 466 APICKLTKIYRQNENQAIAVIANDIRRGEIPS-YKEDYEDFRF-------------IDVS 511 Query: 614 IRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDR 673 I + + + + + + + S + Sbjct: 512 IANYYAMKNSVSSNDFADLRGENSEYILNNILNISSTYIQDYYDFIKKKKISKALTLFQV 571 Query: 674 VTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIP-------- 725 +T + D + F + +++ Sbjct: 572 ITPMKGGVLGVDNLNIQLQKLFNHTKGK--AFASKIYEYKLTDKVIHIKNENMKAQTMSM 629 Query: 726 ---------GLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTA-LKLENGWV 775 RV G + + + +V + + L L Sbjct: 630 YKSGSTDFLERRVYNGQLGLIIKLDFEEEKCIVLYPNDDMVVFYDFENVHHLLSLAYCLT 689 Query: 776 ETPGHSVSDSATVFA---SVTQMAMDNATLNGLARSGRDVRLYSSLDETRTA 824 + + S M + R+ + + + ++A Sbjct: 690 IHKTQGMEYDNALIPMSFSHYIMHNTKLLYTAITRAKKMCFIVGEEEAFKSA 741 >UniRef50_A6DNF1 Exonuclease V (RecBCD complex), alpha chain n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DNF1_9BACT Length = 601 Score = 229 bits (583), Expect = 9e-58, Method: Composition-based stats. Identities = 96/637 (15%), Positives = 181/637 (28%), Gaps = 123/637 (19%) Query: 877 SKKLAFSMVDLLTE-------AKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTG 929 + + D+L E S + + + +GD + Sbjct: 47 QQHSVLPLRDILIEYRNEDGHIVSHNIDFELDEQALKIYRQVMGQGDETK-PLIVDLENQ 105 Query: 930 LLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTS-----------GQRAATR 978 L+ Y AE ++ R I + + + + G+L +KL Q+ A Sbjct: 106 LIYLNKYYRAEATVARFISKLADQT----QELDGQLTQKLNEVFPNQIAGKINWQKVAAF 161 Query: 979 MILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAG- 1037 M L + RF V+ G G GKTT +++ + + R+ L PT +A + + Sbjct: 162 MALRS--RFCVISGGPGTGKTTTVGKILALLLEQNPAT--RIDLLAPTGKAADRLGESIR 217 Query: 1038 ---------------------VDAQTLASFLH-DTQLQQRSGETPDFSNTLFLLDESSMV 1075 V AQT+ +L + + + + L+DESSMV Sbjct: 218 NFISSQSDEKAFSAATLAKIPVQAQTIHRYLGFAPGGGFKHHDKFKTPSDILLIDESSMV 277 Query: 1076 GNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPE 1135 T + + R + GD DQL A+ G + E Sbjct: 278 PLTLFRSVIQALQSH-CRVILLGDKDQLAAVETGNVLGDLTAGGQINSFSPT----FAKE 332 Query: 1136 LREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAM 1195 L+E LI + + S Q+ EHS S S +LA + Sbjct: 333 LKELSSELILNEDQSMGSL-----------QDIMVKLEHSFRFDSSSGIGQLARDVNEQP 381 Query: 1196 LKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELG 1255 + Y+ I E + + I + + Sbjct: 382 VPHPLEDTQYFKAYDDIAHQALPAKAEE---------------LFSGAIRQCFTEYKK-- 424 Query: 1256 KEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGN 1315 + + L+ L+ + R + + +I Q E Sbjct: 425 ----------SLRSPEEALKALNKF---RILCASRNGSFGASKLNQHISQIIFSQSDE-- 469 Query: 1316 TRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLS 1375 + G + T++D + + Sbjct: 470 ----------------------SLYKGRAIMITRNDYNIKLYNGDIGIILPDDSGLPKAW 507 Query: 1376 DGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVA 1435 +R A+A+T H +QG+ + + +R + E Y Sbjct: 508 FPGPDNSLRSFPPSMLPDYQSAFAMTIHKSQGSEYQNVHLILPDQADR--LLSKELIYTG 565 Query: 1436 LSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEP 1472 ++R K + +Y +R+ + + + Sbjct: 566 ITRAKSAIVIYA-SRKTLLSTCKRQTDRLSGLLLRMK 601 Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 64/588 (10%), Positives = 159/588 (27%), Gaps = 66/588 (11%) Query: 287 DIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLS-ERKVQFTYTDVLARTV- 344 + + + Q A + G S + + + ++ + ++ D+L Sbjct: 4 QLPIFSEIDRQFAQFISQRAGELSAHELETLEDICLVLSYYANQQHSVLPLRDILIEYRN 63 Query: 345 --GILPPENGVIERARAGI---DEAISREQL---IPLDREKGLFTSGIHVLDELSVRALS 396 G + N E + + + + + +D E L + E +V Sbjct: 64 EDGHIVSHNIDFELDEQALKIYRQVMGQGDETKPLIVDLENQLIYLNKYYRAEATVARFI 123 Query: 397 RDIMKQNRVT----------VHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQR 446 + Q + V P + + A + + R + G Sbjct: 124 SKLADQTQELDGQLTQKLNEVFPNQIAGKINWQKVAAFMALRSRFCVISGGPGTGKTTTV 183 Query: 447 ERVAELVMMAREQGREVQIIAADRRSQMNMKQDER---------------------LSGE 485 ++ L+ + + + ++A ++ + + R + + Sbjct: 184 GKILALL-LEQNPATRIDLLAPTGKAADRLGESIRNFISSQSDEKAFSAATLAKIPVQAQ 242 Query: 486 LITGRRQLLEGMAFTPGS-------TVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSG 538 I G F +++D+ + L +++ H +L+ D Sbjct: 243 TIHRYLGFAPGGGFKHHDKFKTPSDILLIDESSMVPLTLFRSVIQALQSHCRVILLGDKD 302 Query: 539 QR--TGTGSALMAMKDAGVNTYRWQG--GEQRPATIISEPDRNVRYARLAGDFAASVKAG 594 Q TG+ L + G E + + + + L + Sbjct: 303 QLAAVETGNVLGDLTAGGQINSFSPTFAKELKELSSELILNEDQSMGSLQDIMVKLEHSF 362 Query: 595 EESVAQVSGVREQAILTQAIRSEL-KTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPG 653 + G + + Q + L TQ ++ AL R Sbjct: 363 RFDSSSGIGQLARDVNEQPVPHPLEDTQYFKAYDDIAHQALPAK----AEELFSGAIR-- 416 Query: 654 MVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVA 713 ++ RS + + + G +++ S + ++ + Sbjct: 417 QCFTEYKKSLRSPEEALKAL---NKFRILCASRNGSFGASKLNQHISQIIFSQSDE-SLY 472 Query: 714 DGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPG-RAEPATLPVSDSPFTALKLEN 772 G + +T +++ GD + PG + P S P Sbjct: 473 KGRAIMITRNDYNIKLYNGDIGIILPDDSGLPKAWFPGPDNSLRSFPPSMLPDYQSAFAM 532 Query: 773 GWVETPGHSVSDSATVFASVTQMAMDNAT-LNGLARSGRDVRLYSSLD 819 ++ G + + + G+ R+ + +Y+S Sbjct: 533 TIHKSQGSEYQNVHLILPDQADRLLSKELIYTGITRAKSAIVIYASRK 580 >UniRef50_D0IXL7 Exodeoxyribonuclease V, alpha subunit n=2 Tax=Comamonas testosteroni RepID=D0IXL7_COMTE Length = 696 Score = 229 bits (582), Expect = 1e-57, Method: Composition-based stats. Identities = 87/590 (14%), Positives = 178/590 (30%), Gaps = 83/590 (14%) Query: 925 GYGTGLLVSRASYEAEKSILRHILEG-KEAVMPLMERVPGELMEKLT----------SGQ 973 LL R ++ E+S+ HI + + L E E + +L Q Sbjct: 151 DGAAPLLYLRRYWDYERSVAAHIAQRTAADAVALDEPRVREWLGRLFSSSAAAANAVDWQ 210 Query: 974 RAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNML-PESERPRVVGLGPTHRAVGE 1032 + A + L +V+ G G GKT +++ + P++ + RV PT +A Sbjct: 211 KLACALAL--RGHMSVITGGPGTGKTYTAARLLALLFATAPDAAQLRVALAAPTGKAAAR 268 Query: 1033 MRSA------------GVD------------AQTLASFLHDTQ--LQQRSGETPDFSNTL 1066 ++ + G + A+TL S L + + Sbjct: 269 LKQSIDSSLLELKEAVGRELDLEALVKRMGAARTLHSLLRARPDTRRFAHHAGNPLDVDV 328 Query: 1067 FLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIM 1126 ++DE+SM+ MA R + GD DQL ++ G + Sbjct: 329 LIVDEASMIHLEMMAALLQ-ALPPTARLILLGDKDQLASVEAGAVLGDLCRDA------- 380 Query: 1127 KEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAK 1186 Q + + R ++L + +H+V + Sbjct: 381 -----QRGNYAPDTAAYVERVTGQSLPA------QYLAPARALPLAQHTVMLRESRRFGG 429 Query: 1187 LAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHD 1246 +A+ G+A + + + + + + +++ Sbjct: 430 PIGLLAQAVNAGDAPSAMALLRTQTQAGLHAELWAREGGE-------------VEAVVRS 476 Query: 1247 VREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGL 1306 + G + VL G +T HR V +A + L Sbjct: 477 AVQGRGGMASYAAYAEVLAQHGQGKG--CGFATEAEHRQW------VREVLAAFDRYRLL 528 Query: 1307 ITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTA 1366 ++D ++ A G + T++D + G + Sbjct: 529 CAVRDGSWGVAGLNRAVEQALQAMGAIRKEGEWYMGRPVMVTRNDAQLGVFNGDIGMALP 588 Query: 1367 VSGDSVTLSDGQQTREI-RPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKL 1425 D L E+ H++ A+A+T H +QG+ + +G Sbjct: 589 SFADPARLRVYFMQGELLHHVSTARLAHVETAFAMTVHKSQGSEFEHTALVLAAQGGN-- 646 Query: 1426 MAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPD 1475 + E Y ++R ++ ++T+ A+ + Q+ + F + Sbjct: 647 VLSRELVYTGITRARKAFSLWTEVPGLLVSAMGSPTQRSSGLLGFMERAQ 696 Score = 99.7 bits (246), Expect = 1e-18, Method: Composition-based stats. Identities = 74/649 (11%), Positives = 149/649 (22%), Gaps = 81/649 (12%) Query: 249 ASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGP 308 A + + +A ++ A + + R + P Sbjct: 26 PGTTDWLAALERLADAGLLRRLDSALAAFVAAQDAEAGPALLVATAVLAQMEGRGHSCLP 85 Query: 309 ASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISRE 368 D Q + ++ + + V+ + G A + Sbjct: 86 LKALAGDPNQILAWPKEAERLQQSLWEQLPGRLADWLQALRRSPVVRVVQPGAPAADRGQ 145 Query: 369 QLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVP-------------- 414 L+ LD L + E SV A + V + + Sbjct: 146 PLVLLDGAAPLLYLRRYWDYERSVAAHIAQRTAADAVALDEPRVREWLGRLFSSSAAAAN 205 Query: 415 RTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMA-----REQGREVQIIAAD 469 A ++ + S+ G G+ A L+ + V + A Sbjct: 206 AVDWQKLACALALRGHMSVIT---GGPGTGKTYTAARLLALLFATAPDAAQLRVALAAPT 262 Query: 470 RRSQMNMKQDER-----------------------LSGELITGRRQLLEGMAFTPG---- 502 ++ +KQ + + + Sbjct: 263 GKAAARLKQSIDSSLLELKEAVGRELDLEALVKRMGAARTLHSLLRARPDTRRFAHHAGN 322 Query: 503 ----STVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR--TGTGSALMAM----KD 552 +IVD+ + L+ LL +L+ D Q G+ L + + Sbjct: 323 PLDVDVLIVDEASMIHLEMMAALLQALPPTARLILLGDKDQLASVEAGAVLGDLCRDAQR 382 Query: 553 AGVNT----YRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQA 608 Y + Q P R + A+ S + G V Sbjct: 383 GNYAPDTAAYVERVTGQSLPAQYLAPARALPLAQHTVMLRESRRFGGPIGLLAQAVNAGD 442 Query: 609 I------LTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPE 662 L ++ L + + Y + Sbjct: 443 APSAMALLRTQTQAGLHAELWAREGGEVEAVVRSAVQGRGGMASYAAYAEVLAQHGQGKG 502 Query: 663 -----TRSHDRYVIDRVTAQSH-SLTLRDAQGETQVVRISSLDSSWSL---FRPEKMPVA 713 H ++V + + A L G V ++ ++ Sbjct: 503 CGFATEAEHRQWVREVLAAFDRYRLLCAVRDGSWGVAGLNRAVEQALQAMGAIRKEGEWY 562 Query: 714 DGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENG 773 G + VT L V GD D + V VS + ++ Sbjct: 563 MGRPVMVTRNDAQLGVFNGDIGMALPSFADPARLRVYFMQGELLHHVSTARLAHVETAFA 622 Query: 774 WVETPGHSVSD--SATVFASVTQMAMDNAT-LNGLARSGRDVRLYSSLD 819 +A V A+ + G+ R+ + L++ + Sbjct: 623 MTVHKSQGSEFEHTALVLAAQGGNVLSRELVYTGITRARKAFSLWTEVP 671 >UniRef50_B1C665 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C665_9FIRM Length = 737 Score = 228 bits (581), Expect = 2e-57, Method: Composition-based stats. Identities = 97/832 (11%), Positives = 213/832 (25%), Gaps = 139/832 (16%) Query: 665 SHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKI 724 S + Y I V +T+ + D + E+L + Sbjct: 17 SDNLYTIADVDVNDILITIVGYFENLKPGIEIEADGEYINHIKYGEQFKV-EKLEIVIPT 75 Query: 725 PGLRVSGGDR-LQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVS 783 + + V + +V + + P ++ + Sbjct: 76 DTDSIYNYLKSGMVGGIGPKKAKEIVDHFGDKTLEILEKDPMRLSEV---------KGIG 126 Query: 784 DSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTR 843 + + N L S +++ + + + T I Sbjct: 127 KKTALLVGLEYKNQGNMRDIVLKLSKYNIKPNYAKKLYDEYKGDTLNIIQTNPYALIDDV 186 Query: 844 AGETSLETAISHQKSALHTPAQQAIHLALPV-----VESKKLAFSMVDLLTEAKSFAAEG 898 G + + I + +L + G Sbjct: 187 YGIGFKRADQIAMSVGIEMESPYRIISGIKYTLSSCYRDGNTYILKDELEEKVAKIL--G 244 Query: 899 TGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHI---------LE 949 + + ++ + YE E +++ Sbjct: 245 VNKDIISHNLANLFLDDSVILEVTED---EERCFLKELYECEIESAKNLMGLISYNEKDS 301 Query: 950 GKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAV 1009 + L+++ L Q+ A +++ + +++ G T +++A+ Sbjct: 302 EEIDFDKLIKKYEEINEINLDKTQKEAVISAIKS--KVSIITGG----PGTGKTTIINAI 355 Query: 1010 NMLPESERPRVVGLGPTHRAVGEMRSAGV-DAQTLASFLH-------DTQLQQRSGETPD 1061 + S + PT RA M + +A+T+ L D L E Sbjct: 356 IYILGSIGEKYTLTAPTGRAAKRMSESTKSEAKTIHRLLEYEYTLEDDHFLSFGKNEDNT 415 Query: 1062 FSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAA 1121 + ++DE SMV + + + GD DQL ++ G + Sbjct: 416 IDSDYIIIDEMSMVDISLFDAFLKAV-KNKTSLLFVGDIDQLPSVGAGNVLSDLISSEIF 474 Query: 1122 DVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSH 1181 V + I RQ E + + + E+ + + + + Sbjct: 475 PVTKLDTIYRQDKESLIITNAHRINKGKMPILKKEADDFYFINTITQEKIKRNILNIVYN 534 Query: 1182 SQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLN 1241 + L +++D+ +P + LN Sbjct: 535 YKNTPLKRYD--------------------LLKDFQIISPLKKGL--------AGVSELN 566 Query: 1242 SMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGIS 1301 + D +LN A+ E++ ST D ++ + N Y Sbjct: 567 KSVQD----------------ILNPAHNTKNEIQHGSTTFRENDKVMQIKNNYQI----- 605 Query: 1302 KDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSV 1361 + GD K D+E+ Sbjct: 606 -----------------------KWTDINTLKKGEGVF-NGDMGIIKKIDKEKQ------ 635 Query: 1362 WTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEG 1421 T+ + D + + + + ++L+YAIT H +QG+ I Sbjct: 636 -TLEIIFDDEKRVIYPK----------EQMEELNLSYAITVHKSQGSEFKAIIIPIF--S 682 Query: 1422 NRKLMAGFESAYVALSRMKQHVQVY--TDNRQGWTDAINNAVQKGTAHDVFE 1471 Y A++R K+ V + + + ++ +K T + Sbjct: 683 GYSGFLNRNLLYTAVTRAKEMVILIGEVNGLKSMIKSVQKNKRKTTLAERLH 734 Score = 159 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 57/668 (8%), Positives = 161/668 (24%), Gaps = 100/668 (14%) Query: 196 FGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVEAFSGRSQTIREAVGEDASLKSRD 255 G +++ + E + E+ G+ + + RD Sbjct: 92 IGPKKAKEIVDHFGDKTLEILEKDPMRLSEVKGIGK------KTALLVGLEYKNQGNMRD 145 Query: 256 VAALDTRKSKQHVDPEIKMAEWMQTLKETGFD-----IRAYRDAADQRADLRTLTPGPAS 310 + ++ + + + E+ I +RAD ++ G Sbjct: 146 IVLKLSKYNIKPNYAKKLYDEYKGDTLNIIQTNPYALIDDVYGIGFKRADQIAMSVGIEM 205 Query: 311 QDGPDVQQAVTQAIAGLSE-RKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQ 369 + + + ++ ++ + IL +I A + + Sbjct: 206 ESPYRIISGIKYTLSSCYRDGNTYILKDELEEKVAKILGVNKDIISHNLA--NLFLDDSV 263 Query: 370 LIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPE------------KSVPRTA 417 ++ + ++ E+ ++ N + Sbjct: 264 ILEVTEDEERCFLKELYECEIESAKNLMGLISYNEKDSEEIDFDKLIKKYEEINEINLDK 323 Query: 418 GYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMK 477 +AV + + S+ G + ++ + G + + A R+ M Sbjct: 324 TQKEAVISAIKSKVSIITGGPGTGK---TTIINAIIYILGSIGEKYTLTAPTGRAAKRMS 380 Query: 478 QDERLSGELITGRRQL-------------LEGMAFTPGSTVIVDQGEKLSLKETLTLLDG 524 + + + I + +I+D+ + + L Sbjct: 381 ESTKSEAKTIHRLLEYEYTLEDDHFLSFGKNEDNTIDSDYIIIDEMSMVDISLFDAFLKA 440 Query: 525 AARHNVQVLITDSGQR--TGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYAR 582 + + D Q G G+ L + + + R Sbjct: 441 VKNKTSLLFVGDIDQLPSVGAGNVLSDLISSEIFPVTKLDTIYRQ--------------- 485 Query: 583 LAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSR 642 +ES+ + R + + LK + + ++ + Sbjct: 486 -----------DKESLIITNAHR----INKGKMPILKKE---ADDFYFINTITQEKIKRN 527 Query: 643 SRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSW 702 + Y+ P R ++ L ++ ++ ++ Sbjct: 528 ILNIVYNYK-------NTPLKRYDLLKDFQIISPLKKGLAGVSELNKSVQDILNPAHNTK 580 Query: 703 SLFRPEKMPVADGERLRVTGKIPGL------------RVSGGDRLQVASVSEDAMTVVVP 750 + + + +++ + V GD + + ++ T+ + Sbjct: 581 NEIQHGSTTFRENDKVMQIKNNYQIKWTDINTLKKGEGVFNGDMGIIKKIDKEKQTLEII 640 Query: 751 GRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFA---SVTQMAMDNATLNGLAR 807 E + + L L A + + N + R Sbjct: 641 FDDEKRVIYPKEQM-EELNLSYAITVHKSQGSEFKAIIIPIFSGYSGFLNRNLLYTAVTR 699 Query: 808 SGRDVRLY 815 + V L Sbjct: 700 AKEMVILI 707 >UniRef50_A3YGD9 Exodeoxyribonuclease V alpha chain n=1 Tax=Marinomonas sp. MED121 RepID=A3YGD9_9GAMM Length = 668 Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 77/690 (11%), Positives = 169/690 (24%), Gaps = 102/690 (14%) Query: 814 LYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALP 873 L LD + L + + Sbjct: 38 LIRQLDLHTCLRLAGHCHEQRSEVLLAALVTSFYLGQGHSCLPLKRLFDSPFANVTQSQW 97 Query: 874 VVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVS 933 L +D L A + E I + + L Sbjct: 98 QSALHSLDVFSLDQLMCALKASP-LVQLVESKPLIPKHVTT-----LSKPFVLDGERLYL 151 Query: 934 RASYEAEKSILRHILEGKEAVM-----PLMERVPGELMEKLTS--GQRAATRMILETSDR 986 Y E ++ +I + + + ++ L Q+ A S Sbjct: 152 ARYYAFETQVIEYIQKAQSHASYAFDGAWLTQLFPSGETALNEFDWQKIAVANAALQS-- 209 Query: 987 FTVVQGYAGVGKTTQFRAVMSAVNMLPES--ERPRVVGLGPTHRAVGEMRSAGVDA---- 1040 F+V+ G G GKTT ++ + ++ + + PT +A + + + A Sbjct: 210 FSVISGGPGTGKTTTVTKLLVLLARQAQALSQGLTIELAAPTGKAAARLTQSIIQAKDKL 269 Query: 1041 ------------------QTLASFLHDT--QLQQRSGETPDFSNTLFLLDESSMVGNTDM 1080 TL L + + + L+DE+SMV M Sbjct: 270 RKSTDFNDAVFDLIPEQASTLHRLLGSEYGRSGFKHNAKNPLHLDVLLVDEASMVDLPMM 329 Query: 1081 ARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAV 1140 A+ R + GD DQL ++ G R + Sbjct: 330 AKLL-AALPPNARLILLGDKDQLASVEAGSVLADLTYGIEPIQFSETWAKRLGQLTQTDF 388 Query: 1141 YSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEA 1200 LI D A+S +S+ + + + + +A A++ G+ Sbjct: 389 TDLIQHDENHAVSIRQSLSLLVKSYRFDQNSGIGHLASAVNLGDA--AQSLSILNQSGDQ 446 Query: 1201 FPDVPMTLYEAIVRD-YTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQV 1259 +PD+ + + + + ++ + G L Sbjct: 447 YPDLAWQKLDQVEKGLDIAALAKGYDKYWLGV-------------------KGVLHDGAS 487 Query: 1260 MVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLI 1319 + + + ++ + Y ++ + Sbjct: 488 IQSL-------------FQLFSNYQILCAVRSGDYG-------------VESLNHQLQEH 521 Query: 1320 SPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVT--AVSGDSVTLSDG 1377 + + + T++D G + + + + Sbjct: 522 FYKRGRMLNPQGWYAGK-------AIIITRNDANLGLFNGDIGICLPDEQDKERMRVWFE 574 Query: 1378 QQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALS 1437 + + + +T H +QG+ + + E Y ++ Sbjct: 575 LPDGSFKAYLPSRLSENEAVFVMTVHKSQGSEFQHVELVLPP--YESPVMTKELIYTGIT 632 Query: 1438 RMKQHVQVYTDNRQGWTDAINNAVQKGTAH 1467 R K H ++ + I V + + Sbjct: 633 RAKSHFSLWA-SVDVIKTGIQTRVARHSGL 661 Score = 110 bits (273), Expect = 7e-22, Method: Composition-based stats. Identities = 57/493 (11%), Positives = 115/493 (23%), Gaps = 57/493 (11%) Query: 380 FTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTA--GYSDAVS-VLAQDRPSLAIV 436 F + + + + S + P AV+ Q ++ Sbjct: 157 FETQVIEYIQKAQSHASYAFDGAWLTQLFPSGETALNEFDWQKIAVANAALQSFSVISGG 216 Query: 437 SGQGGAAGQRERVAELVMMARE--QGREVQIIAADRRSQMNMKQDER------------- 481 G G + + L A+ QG +++ A ++ + Q Sbjct: 217 PGTGKTTTVTKLLVLLARQAQALSQGLTIELAAPTGKAAARLTQSIIQAKDKLRKSTDFN 276 Query: 482 --------LSGELITGRRQL-LEGMAFTPG-------STVIVDQGEKLSLKETLTLLDGA 525 + F ++VD+ + L LL Sbjct: 277 DAVFDLIPEQASTLHRLLGSEYGRSGFKHNAKNPLHLDVLLVDEASMVDLPMMAKLLAAL 336 Query: 526 ARHNVQVLITDSGQR--TGTGSALMAMKDAGVNTYR----------WQGGEQRPATIISE 573 + +L+ D Q GS L + G+ + I + Sbjct: 337 PPNARLILLGDKDQLASVEAGSVLADL-TYGIEPIQFSETWAKRLGQLTQTDFTDLIQHD 395 Query: 574 PDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTA 633 + V + S + + S S L G P++ Sbjct: 396 ENHAVSIRQSLSLLVKSYRFDQNSGIGHLASAVNLGDAAQSLSILNQSGD-QYPDLAWQK 454 Query: 634 LSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVV 693 L V L Y + ++ + G+ V Sbjct: 455 LDQVEKGLDIAALAKGYDKYWL--GVKGVLHDGASIQSLFQLFSNYQILCAVRSGDYGVE 512 Query: 694 RISSLDSSWSLFRPEKMP---VADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVP 750 ++ R + G+ + +T L + GD +D + V Sbjct: 513 SLNHQLQEHFYKRGRMLNPQGWYAGKAIIITRNDANLGLFNGDIGICLPDEQDKERMRVW 572 Query: 751 GR-AEPATLPVSDSPFTALKLENGWVETPGHSVSDSAT--VFASVTQMAMDNAT-LNGLA 806 + + S + + V M G+ Sbjct: 573 FELPDGSFKAYLPSRLSENEAVFVMTVHKSQGSEFQHVELVLPPYESPVMTKELIYTGIT 632 Query: 807 RSGRDVRLYSSLD 819 R+ L++S+D Sbjct: 633 RAKSHFSLWASVD 645 >UniRef50_A4AB31 Putative uncharacterized protein n=1 Tax=Congregibacter litoralis KT71 RepID=A4AB31_9GAMM Length = 1227 Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 121/680 (17%), Positives = 201/680 (29%), Gaps = 80/680 (11%) Query: 892 KSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGK 951 G I+A + + +A+ T L++R EK + R G Sbjct: 503 IDHDLLAVVIESFTGFIDAVQLKNGAPALQLAEYASTKQLIARTV---EKRLKRKRTAGD 559 Query: 952 EAVMPLMERVPGE--------LMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFR 1003 L+ GE + + Q A + +V+ G AG GK+T + Sbjct: 560 FDWDSLVADAIGEGVPSDPVLAASENKARQEKAAALEEIYQSGISVLTGSAGTGKSTLLK 619 Query: 1004 AVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAG---VDAQTLASFLHDTQLQ------- 1053 A+ +P E ++ L PT +A + A QT+A FL Sbjct: 620 ----ALCRIPGVEESGLLLLAPTGKARVRLEQATGMFKQGQTIAQFLLKYGRYDGETGRY 675 Query: 1054 -QRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPF 1112 S P ++DE SM+ +A + I R + GD QL I G+PF Sbjct: 676 LWVSAADPCRDRKTVIVDECSMLTEDQLAALLSGIKNVE-RLILVGDPQQLPPIGAGRPF 734 Query: 1113 RLQQTRSAAD------------VAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKP 1160 R D A + RQ + + L+ D L+ Sbjct: 735 VDIVERLRPDGESNYFPRVDAGYASLSIPRRQLSDGDKPREDLLFADYFSGGP-LDPAAD 793 Query: 1161 SQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRT 1220 R V +S + + Q G + +I + Sbjct: 794 EVWTRISSGSIDGLKVVSWSTPDDLQAKLVGQLVDELGLDSEEDEAGFEVSIGGVRWDKD 853 Query: 1221 PEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTW 1280 P+ + + +DRR D + L +V V +N R Sbjct: 854 PDR----VFFNNRWKDRRGAAESAED-WQILSPLRASEVGVEAINRLLQSRF-RERAQHM 907 Query: 1281 ETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVG 1340 R + R I D +I ++++ + Sbjct: 908 AAQRWPKIPKPMGPQR---ILWGDKVINVRNSSKRKVWPDIDSPYVANGDI--------- 955 Query: 1341 TGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQ-EQAEQHIDLAYA 1399 + K + +G + +TA +G + Q E A ++LAYA Sbjct: 956 ---GVVVGKYQKGKGVPKHLEVELTAQTGPQYSAGSPQYKYFASEFSGEDANPPLELAYA 1012 Query: 1400 ITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINN 1459 +T H QG+ + N + E Y AL+R K V V+ ++ Sbjct: 1013 LTVHKTQGSEFGTTFLIIP---NPCRLLSREMLYTALTRHKDRVVVFHQGDLRDIARFSS 1069 Query: 1460 AVQKGTAHDV----FEPKPDREVMNAERLFSTARELRDVAAGRAV-----------LRQA 1504 A + +P P + + +F A + A G V L Sbjct: 1070 PDYSEIARRLTNIFVDPDPVDIEIKSRHVFLDANRIHRTARGERVRSKSEVIIANQLHST 1129 Query: 1505 GLAGGDSPARFIAPGRKYPQ 1524 G+ P I +YP Sbjct: 1130 GIDYSYEPPVVINGRERYPD 1149 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 91/730 (12%), Positives = 185/730 (25%), Gaps = 101/730 (13%) Query: 337 TDVLARTVGILPPENGVIERARAG----IDEAISREQLIPLDREKGLFTSGIHVLDELSV 392 D+LA + ++ + E S +QLI EK L + Sbjct: 505 HDLLAVVIESFTGFIDAVQLKNGAPALQLAEYASTKQLIARTVEKRL--KRKRTAGDFDW 562 Query: 393 RALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAEL 452 +L D + + + + A A ++ + +++++G G G+ + L Sbjct: 563 DSLVADAIGEGVPSDPVLAASENKARQEKAAALEEIYQSGISVLTGSAG-TGKSTLLKAL 621 Query: 453 VMMAREQGREVQIIAADRRSQMNMKQDERL--SGELIT--------------GRRQLLEG 496 + + + ++A ++++ ++Q + G+ I + Sbjct: 622 CRIPGVEESGLLLLAPTGKARVRLEQATGMFKQGQTIAQFLLKYGRYDGETGRYLWVSAA 681 Query: 497 MAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR--TGTGSALMAMK--- 551 TVIVD+ L+ + LL G +L+ D Q G G + + Sbjct: 682 DPCRDRKTVIVDECSMLTEDQLAALLSGIKNVERLILVGDPQQLPPIGAGRPFVDIVERL 741 Query: 552 --DAGVNTYRWQGGEQRPATIISEP---DRNVRYARLAGDFAA----SVKAGEESVAQVS 602 D N + +I R L D+ + A E S Sbjct: 742 RPDGESNYFPRVDAGYASLSIPRRQLSDGDKPREDLLFADYFSGGPLDPAADEVWTRISS 801 Query: 603 GVRE-------------QAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDM 649 G + QA L + EL ++ W R + Sbjct: 802 GSIDGLKVVSWSTPDDLQAKLVGQLVDELGLDSEEDEAGFEVSIGGVRWDKDPDRVFFNN 861 Query: 650 YRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRP-- 707 + S + + I S + R + + + Sbjct: 862 -----RWKDRRGAAESAEDWQILSPLRASEVGVEAINRLLQSRFRERAQHMAAQRWPKIP 916 Query: 708 ---EKMPVADGERLRVTGKIPGLR---------VSGGDRLQVASVSEDAMTVVVPGRAEP 755 + G+++ + V+ GD V + V P E Sbjct: 917 KPMGPQRILWGDKVINVRNSSKRKVWPDIDSPYVANGDIGVVVGKYQKGKGV--PKHLEV 974 Query: 756 ATLPVSDSPFTA--------------------LKLENGWVETPGHS--VSDSATVFASVT 793 + ++A L+L + + + Sbjct: 975 ELTAQTGPQYSAGSPQYKYFASEFSGEDANPPLELAYALTVHKTQGSEFGTTFLIIPNPC 1034 Query: 794 QMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAI 853 ++ L R V ++ D A + + ++ I Sbjct: 1035 RLLSREMLYTALTRHKDRVVVFHQGDLRDIARFSS-PDYSEIARRLTNIFVDPDPVDIEI 1093 Query: 854 SHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQI- 912 + L V ++ + L + ++ E + Sbjct: 1094 KSRHVFLDANRIHRTARGERVRSKSEVIIANQ-LHSTGIDYSYEPPVVINGRERYPDFVI 1152 Query: 913 ---KRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHIL--EGKEAVMPLMERVPGELME 967 G+ Y + R S + E I IL E + + Sbjct: 1153 EDDDSGETYYWEHLGMMSDPQYRERWSRKYEDYIAEGILPVEDGGGDRGALITTEEHEGQ 1212 Query: 968 KLTSGQRAAT 977 L S A Sbjct: 1213 GLNSEAIQAI 1222 >UniRef50_Q0VNI0 Exodeoxyribonuclease V alpha chain n=1 Tax=Alcanivorax borkumensis SK2 RepID=Q0VNI0_ALCBS Length = 645 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 79/579 (13%), Positives = 159/579 (27%), Gaps = 98/579 (16%) Query: 930 LLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKL-------TSGQRAATRMILE 982 L R ++ E ++ I + PL E E + KL T Q+ A L Sbjct: 119 RLYLRRNWAREVAVADAIEQKLATANPLPEAPLREALAKLFPGSNNHTDWQQVAC--ALA 176 Query: 983 TSDRFTVVQGYAGVGKTTQFRAVMSAVNMLP--ESERPRVVGLGPTHRAVGEMRSAG--- 1037 + +++ G G GKTT ++ + L +++R R+ PT +A + + Sbjct: 177 SRSGISIITGGPGTGKTTTVVRLLGLLQSLAMADNQRLRIRLAAPTGKAAARLTESIGEQ 236 Query: 1038 ---------------VDAQTLASFLHDTQ--LQQRSGETPDFSNTLFLLDESSMVGNTDM 1080 + TL L R L ++DE+SM+ M Sbjct: 237 VGKLHVDATVRDAIPTEVTTLHRLLGTRPDSRHFRHHGDNPLHADLVVVDEASMIDMDMM 296 Query: 1081 ARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAV 1140 A ++ R + GD DQL ++ G R E R Sbjct: 297 ACLLEALSPH-TRLILLGDKDQLASVEAGAVMGDLC--------------RHAHEGRYKQ 341 Query: 1141 YSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEA 1200 ++ + + + Q P A T + + E + + Sbjct: 342 RTIEFVNNTCGADISDYQETDQNPGNALAQQTAMLRTNWRSKDSPGIGELARAVNEENLP 401 Query: 1201 FPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVM 1260 Y + + + +TL++ N + Sbjct: 402 QVRESFQRYPDSLYRQHLSSDSQQLETLLLNGSN---------------------GHTGL 440 Query: 1261 VPVLNTANIRDGELRRLSTWETHR----DALVLVDNVYHRIAGISKDDGLITLQDAEGNT 1316 + + + W L+ + G+ + + IT Sbjct: 441 RALFSAVATPPAQRHDFDDWAAGLLKQLTHQQLLSGLRSGPFGVEQLNQRIT-------- 492 Query: 1317 RLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVW-------TVTAVSG 1369 G + T++D + G + V T + Sbjct: 493 ---------HHLQQQDLAPEREWYPGRPVMMTRNDYQLGLMNGDVGLTLPLLETRKGTAE 543 Query: 1370 DSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGF 1429 + ++ I+ ++ YA+T H +QG+ + + + Sbjct: 544 LLLRVAFQLPDGRIKWVLPSRLDGVETVYAMTVHKSQGSEFKHTLLVLPD--APHPLLTR 601 Query: 1430 ESAYVALSRMKQHVQVYT-DNRQGWTDAINNAVQKGTAH 1467 E Y A++R + + A+ + + Sbjct: 602 ELIYTAVTRARDRFTLLEFGKSAVLDSAVKKRTWRASGL 640 Score = 111 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 56/557 (10%), Positives = 128/557 (22%), Gaps = 103/557 (18%) Query: 364 AISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPR-------- 415 +S+ PL + + E++V + Sbjct: 104 LVSQNGSTPLVLDGSRLYLRRNWAREVAVADAIEQKLATANPLPEAPLREALAKLFPGSN 163 Query: 416 TAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAEL-----VMMAREQGREVQIIAADR 470 V+ R ++I++G G V L + MA Q +++ A Sbjct: 164 NHTDWQQVACALASRSGISIITGGPGTGKTTTVVRLLGLLQSLAMADNQRLRIRLAAPTG 223 Query: 471 RSQMNMKQDER-----------------LSGELITGRRQLLE--------GMAFTPGSTV 505 ++ + + + G V Sbjct: 224 KAAARLTESIGEQVGKLHVDATVRDAIPTEVTTLHRLLGTRPDSRHFRHHGDNPLHADLV 283 Query: 506 IVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR--TGTGSALMAMKDAGVNTYRWQGG 563 +VD+ + + LL+ + H +L+ D Q G+ + + Q Sbjct: 284 VVDEASMIDMDMMACLLEALSPHTRLILLGDKDQLASVEAGAVMGDLCRHAHEGRYKQRT 343 Query: 564 E-------------QRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAIL 610 + + A L ++ + G +A+ Sbjct: 344 IEFVNNTCGADISDYQETDQNPGNALAQQTAMLRTNWRSKDSPGIGELARAVNEENL--- 400 Query: 611 TQAIRSELKT------QGVLGLPEVTMTAL---------------SPVWLDSRSRYLRDM 649 +R + + L + L S V R+ D Sbjct: 401 -PQVRESFQRYPDSLYRQHLSSDSQQLETLLLNGSNGHTGLRALFSAVATPPAQRHDFDD 459 Query: 650 YRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEK 709 + G++ + + + S R V + +T + Q + + Sbjct: 460 WAAGLLKQLTHQQLLSGLRSGPFGVEQLNQRIT---HHLQQQDLAP-------------E 503 Query: 710 MPVADGERLRVTGKIPGLRVSGGDRL------QVASVSEDAMTVVVPGRAEPATLPVSDS 763 G + +T L + GD + + + + V + V S Sbjct: 504 REWYPGRPVMMTRNDYQLGLMNGDVGLTLPLLETRKGTAELLLRVAFQLPDGRIKWVLPS 563 Query: 764 PFTALKLENGWVETPGHSVSDSATVFA---SVTQMAMDNATLNGLARSGRDVRLYSSLDE 820 ++ T+ + + + R+ L Sbjct: 564 RLDGVETVYAMTVHKSQGSEFKHTLLVLPDAPHPLLTRELIYTAVTRARDRFTLLEFGKS 623 Query: 821 TRTAEKLARHPSFTVVS 837 + + Sbjct: 624 AVLDSAVKKRTWRASGL 640 >UniRef50_B0P898 Putative uncharacterized protein n=3 Tax=Bacteria RepID=B0P898_9FIRM Length = 757 Score = 227 bits (577), Expect = 4e-57, Method: Composition-based stats. Identities = 69/303 (22%), Positives = 113/303 (37%), Gaps = 18/303 (5%) Query: 859 ALHTPAQQAIHLALPVVESK--KLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGD 916 + A+ AL +SK L S +L A E EL Sbjct: 219 HDPMRIKGAVFCALDEGKSKRGHLYISSEELEKSALKLLNEKIPVPELRLHQQEVRDMMQ 278 Query: 917 LLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGK------EAVMPLMERVPGELMEKLT 970 + ++ A + + E R I + E + P++E+V E+ +L+ Sbjct: 279 EMILNGAIVSVKDNIYLPRVFAQEDETARRIAQRLVTQMPVEHIAPVLEQVKVEMGLRLS 338 Query: 971 SGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAV 1030 + Q AA +V+ G G GKTT R ++ L ++ + PT RA Sbjct: 339 AQQEAAVYAAF--RHGLSVITGSPGTGKTTVLRTILEVYRRLHPD--GKIALMAPTGRAS 394 Query: 1031 GEMRSAG--VDAQTLASFLHDTQLQQ---RSGETPDFSNTLFLLDESSMVGNTDMARAYA 1085 M + DA+TL S L T + R+ ++ S L ++DE SMV + + Sbjct: 395 RRMSESTGFEDARTLHSGLGLTSEEDEGSRNRKSEPLSADLIIVDEFSMVDMWLAEKFFE 454 Query: 1086 LIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLIN 1145 R V GD DQL ++ G FR V ++ +I RQ+ + A + Sbjct: 455 R-MKANARIVLVGDPDQLPSVGAGNVFREIIETQIVPVTVLDQIFRQSKDSLIAYNAKFI 513 Query: 1146 RDV 1148 + Sbjct: 514 NEG 516 Score = 177 bits (448), Expect = 4e-42, Method: Composition-based stats. Identities = 84/705 (11%), Positives = 182/705 (25%), Gaps = 104/705 (14%) Query: 205 KEQVEALGYE---TEVVGKHGMWEMPGVPVEAFSGRSQTIREAVGEDASLKSRDVA---- 257 + VE G + + E+ G+ + E + Sbjct: 112 ADIVERFGVDTLDILEHQPERLLEIRGITENKLEDIKASYAENRMLQGIMTLLAPFKITP 171 Query: 258 --ALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPD 315 AL + EI + + +GF R + D Sbjct: 172 KTALKIYQYFGPTSVEILEKSPFELCQISGFGFRRVDAIVQKSGG--------DLHDPMR 223 Query: 316 VQQAVTQAIA--GLSERKVQFTYTDVLARTVGILPPENGVIE------RARAGIDEAISR 367 ++ AV A+ + + ++ + +L + V E R + E I Sbjct: 224 IKGAVFCALDEGKSKRGHLYISSEELEKSALKLLNEKIPVPELRLHQQEVRDMMQEMILN 283 Query: 368 EQLIPLDRE---KGLFTSGIHVLDELSVRALSRDIMKQNRVTVHP---EKSVPRTAGYSD 421 ++ + +F ++ R +++ ++ + E + +A Sbjct: 284 GAIVSVKDNIYLPRVFAQEDETARRIAQRLVTQMPVEHIAPVLEQVKVEMGLRLSAQQEA 343 Query: 422 AVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAR--EQGREVQIIAADRRSQMNMKQD 479 AV R L++++G G G+ + ++ + R ++ ++A R+ M + Sbjct: 344 AVYAAF--RHGLSVITGSPG-TGKTTVLRTILEVYRRLHPDGKIALMAPTGRASRRMSES 400 Query: 480 ERLS-GELITGRRQLLEGMA---------FTPGSTVIVDQGEKLSLKETLTLLDGAARHN 529 + L +IVD+ + + + + Sbjct: 401 TGFEDARTLHSGLGLTSEEDEGSRNRKSEPLSADLIIVDEFSMVDMWLAEKFFERMKANA 460 Query: 530 VQVLITDSGQR--TGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDF 587 VL+ D Q G G+ + + + R + + + Sbjct: 461 RIVLVGDPDQLPSVGAGNVFREIIETQIVPVTVLDQIFRQSKDSLIAYNA----KFINEG 516 Query: 588 AASVKAGEESVAQVSGVRE--QAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRY 645 + G + V +E +T+ E++ G+ + LSP Sbjct: 517 NTKLFYGPDFVFVSGDSQEDTAEKITERYCLEIQESGI-----ENVQILSP--------- 562 Query: 646 LRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLF 705 RS +++ L F Sbjct: 563 -----------------FRSEGAASSEQLNETIRELV-----------NPFRSAEEEIKF 594 Query: 706 RPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSE-DAMTVVVPGRAEPATLPVSDSP 764 P +R+ T +VS GD + + + D + TL Sbjct: 595 GP--RIFRVNDRIMQTKN--TEKVSNGDLGFIRYIKDTDQGKKIGMDFGAGRTLEYGVDD 650 Query: 765 FTALKLENGWVETPGHSVSDSATVFA---SVTQMAMDNATLNGLARSGRDVRLYSSLDET 821 + + L + + T M N G+ R+ + V L Sbjct: 651 LSNVDLAYATTIHKAMGSEYETVIMPLLKAHTIMMYRNLLYTGITRAKKRVVLIGQKQVL 710 Query: 822 RTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQ 866 A + + + A +AL + Sbjct: 711 FMAIHRNEIGKRNTLLGMRIQMYFKAYAKKAGIPIPAALEEQLKN 755 Score = 109 bits (272), Expect = 1e-21, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 45/159 (28%), Gaps = 8/159 (5%) Query: 1312 AEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAV--SG 1369 + N + DR+ TK+ + + + + + Sbjct: 572 EQLNETIRELVNPFRSAEEEIKFGPRIFRVNDRIMQTKNTEK--VSNGDLGFIRYIKDTD 629 Query: 1370 DSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGF 1429 + ++DLAYA T H A G+ I +M Sbjct: 630 QGKKIGMDFGAGRTLEYGVDDLSNVDLAYATTIHKAMGSEYETVI--MPLLKAHTIMMYR 687 Query: 1430 ESAYVALSRMKQHVQVYTDNRQGWTDAINN-AVQKGTAH 1467 Y ++R K+ V + +Q AI+ + K Sbjct: 688 NLLYTGITRAKKRVVLIGQ-KQVLFMAIHRNEIGKRNTL 725 >UniRef50_C4K847 Exonuclease V (RecBCD complex), alpha chain n=18 Tax=Enterobacteriaceae RepID=C4K847_HAMD5 Length = 628 Score = 227 bits (577), Expect = 4e-57, Method: Composition-based stats. Identities = 85/589 (14%), Positives = 180/589 (30%), Gaps = 110/589 (18%) Query: 921 DVAKGYGTGLLVSRASYEAEKSILRHILE---GKEAVMPLMERVPGELMEKLTSG----- 972 L + ++ E +++ I + K E +++++L + Sbjct: 101 PTPLVLEKERLYLQRMWKNEGQVIQFISDYSLEKMTYHKKDECRLKQILDQLFTSNESDI 160 Query: 973 --QRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAV 1030 Q+ A + + + + ++ G G GKTT +++A+ L R+ PT +A Sbjct: 161 NFQKVAAAVAITS--KVAIISGGPGTGKTTTVAKLLTALIRLAGERTLRIELAAPTGKAA 218 Query: 1031 GEMRSAG------------------VDAQTLASFLHD--TQLQQRSGETPDFSNTLFLLD 1070 + + A TL L Q R + + ++D Sbjct: 219 VRLTQSLGNAYRELSLSAGESRRLPEKACTLHRLLGAYSKGHQSRYHKNNPLDLDVLVVD 278 Query: 1071 ESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQT--RSAADVAIMKE 1128 E+SMV +AR + + GD DQL ++ G + +E Sbjct: 279 EASMVDLPMLARLID-ALPNSAQVIFLGDRDQLASVEAGSVLGEIGRFLSLGYSTSRAEE 337 Query: 1129 IVRQTPELREA--VYSLINRDVERALSGLESV-KPSQVPRQEGAWAPEHSVTEFSHSQEA 1185 + R T + + N V L + K + ++ G +V H + Sbjct: 338 LNRLTGYDLKGHPIEHFPNLCVAHVCDQLCLLNKNYRFDKKSGIGELAQAVNSGEHHKAH 397 Query: 1186 KLAEAQQKAMLKGEAFPDVPMTLYEAIVRD-------YTGRTPEAREQTLIVTHLNEDRR 1238 + K + Y+ +++D Y + ++ I+ N R Sbjct: 398 SILRDVNKKYVDIRQHALSDAKDYQKLLKDCVAAYQPYLELIKQGKDPETILHAFN--RY 455 Query: 1239 VLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIA 1298 L + L Q+ + ++ + + ++W + R ++ ++ Sbjct: 456 QLLCALRTGSFGLEGL-NTQIEKTLCHSGLLSLSQKPFNNSWYSGRPIMIECNDS---SL 511 Query: 1299 GISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVA 1358 G+ D +TL D G R+ Sbjct: 512 GLFNGDLGMTLYDHSGALRVYFQFSD---------------------------------- 537 Query: 1359 NSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEG 1418 + +V + AYA+T H +QG+ + Sbjct: 538 ---GHIKSVQPNR-------------------LPAHSTAYAMTVHKSQGSEFEHTALVLP 575 Query: 1419 TEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAH 1467 + + E Y A++R +Q + +Y+ ++ AI Q+ + Sbjct: 576 D--HFTPIVTRELVYTAITRARQKLTLYSTDK-VLNHAILTPTQRRSGL 621 Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats. Identities = 61/519 (11%), Positives = 131/519 (25%), Gaps = 77/519 (14%) Query: 372 PLDREKGLFTSGIHVLDELSVRALSRD---------IMKQNRVTVHPEKSVPRTAG---- 418 PL EK +E V D + R+ ++ Sbjct: 103 PLVLEKERLYLQRMWKNEGQVIQFISDYSLEKMTYHKKDECRLKQILDQLFTSNESDINF 162 Query: 419 YSDAVSVLAQDRPSLA---IVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMN 475 A +V + ++ +G+ + + L+ +A E+ +++ A ++ + Sbjct: 163 QKVAAAVAITSKVAIISGGPGTGKTTTVAK--LLTALIRLAGERTLRIELAAPTGKAAVR 220 Query: 476 MKQDER-----------------LSGELITGRRQLLEGMAFTPG--------STVIVDQG 510 + Q + + ++VD+ Sbjct: 221 LTQSLGNAYRELSLSAGESRRLPEKACTLHRLLGAYSKGHQSRYHKNNPLDLDVLVVDEA 280 Query: 511 EKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMKDAG-----------VNTYR 559 + L L+D A ++ QV+ + + A + + G Sbjct: 281 SMVDLPMLARLID-ALPNSAQVIFLGDRDQLASVEAGSVLGEIGRFLSLGYSTSRAEELN 339 Query: 560 WQGGEQRPATIISE------PDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQA 613 G I + L ++ K+G +AQ E Sbjct: 340 RLTGYDLKGHPIEHFPNLCVAHVCDQLCLLNKNYRFDKKSGIGELAQAVNSGEHHKAHSI 399 Query: 614 IRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPE----TRSHDRY 669 +R K + ++ + Y+P + + + + + +RY Sbjct: 400 LRDVNKKYVDIRQHALS----DAKDYQKLLKDCVAAYQPYLELIKQGKDPETILHAFNRY 455 Query: 670 -VIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLR 728 ++ + S L + Q E + L S F G + + L Sbjct: 456 QLLCALRTGSFGLEGLNTQIEKTLCHSGLLSLSQKPFNNS---WYSGRPIMIECNDSSLG 512 Query: 729 VSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATV 788 + GD A+ V + V + A T Sbjct: 513 LFNGDLGMTLYDHSGALRVYFQFS-DGHIKSVQPNRLPAHSTAYAMTVHKSQGSEFEHTA 571 Query: 789 FASVTQMAM---DNATLNGLARSGRDVRLYSSLDETRTA 824 + R+ + + LYS+ A Sbjct: 572 LVLPDHFTPIVTRELVYTAITRARQKLTLYSTDKVLNHA 610 >UniRef50_B5JRL2 Exodeoxyribonuclease V, alpha subunit n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JRL2_9GAMM Length = 672 Score = 226 bits (575), Expect = 6e-57, Method: Composition-based stats. Identities = 97/714 (13%), Positives = 192/714 (26%), Gaps = 99/714 (13%) Query: 804 GLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTP 863 R ++D + S + + I L T Sbjct: 8 PAVERARQQGWLRAIDVALVQFLQQQDDSADDSALAAAALVSQQLSLGHICLDLDRLFTE 67 Query: 864 AQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVA 923 + + A +L +E + L + A G+ D Sbjct: 68 QGECAQRMMGETPKHTSAAPHTNLASELYQLG-----WPALKAALQASQFVGE-KNDDKP 121 Query: 924 KGYGTGLLVSRASYEAEKSILRHILEG--KEAVMPLMERVPGELMEKL----------TS 971 L + + E + +H+ P ++++ L T+ Sbjct: 122 LVLDESRLYLHSQWRTEHRVAQHLASRIKNALKPPQTPATRSKILDALFPSSPNSEAATN 181 Query: 972 GQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVG 1031 Q+ A L F+V+ G G GKTT V+ A+ + + PT +A Sbjct: 182 WQKIACANAL--RGHFSVITGGPGTGKTTTVVKVLCALLAQQSDQTLHIYLAAPTGKAAA 239 Query: 1032 EMRSA--------------------------GVDAQTLASFLHDTQ--LQQRSGETPDFS 1063 M+ + V A+T+ L + R E Sbjct: 240 RMQESMNHALESHAIDPKLFDGQLDNWREQLQVKAKTIHRLLGVIPSSREFRHNERHPLR 299 Query: 1064 NTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADV 1123 + ++DE+SM+ M V GD DQL ++ G Sbjct: 300 CDVVIVDEASMIALDQMDSLLR-ALPESTHLVLLGDKDQLASVEAGAVMGDLCQG----- 353 Query: 1124 AIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQ 1183 A + Q E V + +A ++ P R + +HS ++S Sbjct: 354 ADDIDYQPQHAEWLSRVS----GETLKA----SAINPQGHDRLQCITLLQHSHRFDANSG 405 Query: 1184 EAKLAEAQQKAMLKGEAFPDVPMTLYEAIV-RDYTGRTPEAREQTLIVTHLNEDRRVLNS 1242 +LAEA + + + + D Sbjct: 406 IGQLAEAINGGHQNDIDPLFQRHSDIGLVALTQWRSLCRLGNAEL--------DATGYAH 457 Query: 1243 MIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISK 1302 + ++++ T R+ L+ + G+ Sbjct: 458 YLQQLQQQRPAADAAPADFDQW------------ALTLLKARNRFQLLCALRRGEWGVEA 505 Query: 1303 DDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVW 1362 + I +A+ + + PR+ + ++ + K+D G + Sbjct: 506 INQAI---EADLQRQHLLPRDDEQQPKAVWYEGR-------PIMIQKNDYPVGLMNGDTG 555 Query: 1363 TVTAVS----GDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEG 1418 V + + + + +R H++ A+A+T H +QG+ L Sbjct: 556 LVLSKPDANGDNRLYAVFPDADQGVRWIAPSRLSHVETAFAMTVHKSQGSEFEHTALLLP 615 Query: 1419 TEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEP 1472 E + E Y A++R K + + Q + + Sbjct: 616 PED--SPVLSRELVYTAVTRAKAQFSLCCADTQLLKQLSQRPTMRSSGLQRQLE 667 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 66/581 (11%), Positives = 150/581 (25%), Gaps = 82/581 (14%) Query: 318 QAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREK 377 + + + + +T++ + + P +A + E + L+ LD + Sbjct: 70 ECAQRMMGETPKHTSAAPHTNLASELYQLGWPALKAALQASQFVGEKNDDKPLV-LDESR 128 Query: 378 GLFTSGIHVLDELSVRALSRDIMKQNRV-------------TVHPEKSVPRTAGYSDAVS 424 S E V +K + P A ++ Sbjct: 129 LYLHSQWR--TEHRVAQHLASRIKNALKPPQTPATRSKILDALFPSSPNSEAATNWQKIA 186 Query: 425 VLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQG---REVQIIAADRRSQMNMKQD-- 479 R ++++G G V L + +Q + + A ++ M++ Sbjct: 187 CANALRGHFSVITGGPGTGKTTTVVKVLCALLAQQSDQTLHIYLAAPTGKAAARMQESMN 246 Query: 480 -----------------------ERLSGELITGRRQ--------LLEGMAFTPGSTVIVD 508 ++ + I VIVD Sbjct: 247 HALESHAIDPKLFDGQLDNWREQLQVKAKTIHRLLGVIPSSREFRHNERHPLRCDVVIVD 306 Query: 509 QGEKLSLKETLTLLDGAARHNVQVLITDSGQR--TGTGSALMAMKDAGVNTYRWQGGEQR 566 + ++L + +LL VL+ D Q G+ + + + + Sbjct: 307 EASMIALDQMDSLLRALPESTHLVLLGDKDQLASVEAGAVMGDLCQGADDIDYQPQHAEW 366 Query: 567 PATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGL 626 + + E + D + + S L +AI + Sbjct: 367 LSRVSGETLKASAINPQGHDRLQCITLLQHSHRF-DANSGIGQLAEAINGGHQNDIDPLF 425 Query: 627 PEVTMTALSP--VWLDSRSRYLRDMYRPG-----MVMEQWN----PETRSHDRYVIDRVT 675 + L W ++ G ++Q D++ + + Sbjct: 426 QRHSDIGLVALTQWRSLCRLGNAELDATGYAHYLQQLQQQRPAADAAPADFDQWALTLLK 485 Query: 676 AQSH-SLTLRDAQGETQVVRIS-----SLDSSWSLFRPEKMP----VADGERLRVTGKIP 725 A++ L +GE V I+ L L R ++ +G + + Sbjct: 486 ARNRFQLLCALRRGEWGVEAINQAIEADLQRQHLLPRDDEQQPKAVWYEGRPIMIQKNDY 545 Query: 726 GLRVSGGDRLQVAS---VSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSV 782 + + GD V S + D V A+ ++ S + ++ Sbjct: 546 PVGLMNGDTGLVLSKPDANGDNRLYAVFPDADQGVRWIAPSRLSHVETAFAMTVHKSQGS 605 Query: 783 SDSATVF---ASVTQMAMDNATLNGLARSGRDVRLYSSLDE 820 T + + + R+ L + + Sbjct: 606 EFEHTALLLPPEDSPVLSRELVYTAVTRAKAQFSLCCADTQ 646 >UniRef50_D1VA45 TrwC relaxase n=1 Tax=Frankia sp. EuI1c RepID=D1VA45_9ACTO Length = 1579 Score = 226 bits (575), Expect = 7e-57, Method: Composition-based stats. Identities = 142/920 (15%), Positives = 269/920 (29%), Gaps = 117/920 (12%) Query: 62 DGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGD---KRLIDAHNQAVDFAVRQVE 118 D + ++ G+D+ +APKSVS++ G + + A + AVD + +E Sbjct: 198 DEVERWVAARVASAAVLGFDVVCAAPKSVSLLWAFGDEVLRADVAAALDAAVDATIGYLE 257 Query: 119 ALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANV-TQHNGEWKTLSS 177 A+ + + L +A + HD SR E LH H +V N G+ + +S Sbjct: 258 RHAAFGKIGG---HNRPSRGLAVASYLHDVSRSVEAHLHVHNIVINAVVVAAGDDEPGAS 314 Query: 178 DKVGKTGFIENVYANQIAFGRLYREKLKEQVE-ALGYETEVVGKHGMWEMPGVPVE---A 233 + E + ++ G + L+ ++ G E V ++G+ E+ P + A Sbjct: 315 GWEWRAVDGEVLLSHVRTAGFVGAAVLRRELAVRRGLEWGPV-RNGVAELAAFPADLLAA 373 Query: 234 FSGRSQTIRE------AVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFD 287 FS R + + E A G + S + A +R K + E ++ L+E G+ Sbjct: 374 FSTRHREVAEEFAQIVAAGLEPSGATMTAAQRGSRAPKTVLADETVRRLQVERLEEAGWT 433 Query: 288 IRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGIL 347 + R A + + GL+E+ F +++ + Sbjct: 434 VGQVRQLAAGGEHRPPAIGDDDVAELFTLLAGP----KGLTEKATTFGRREIVRQIAAW- 488 Query: 348 PPENGVIERARAGIDEAISREQLIPLDRE----------KGLFTSGIHVLDELSVRALSR 397 + E D + +++ L + L+T + E +RA+ R Sbjct: 489 GGDRLDAEAIDRLADRFPADSRVVHLQAAAPGQRRRAQPEPLYTVEDMLDTEQRLRAVVR 548 Query: 398 DIMKQNRVTVHPEKSVP------------------------------------------- 414 + S Sbjct: 549 EGRVVAGAAPRVLASPRVVDAFLAAADGFAGSTRPAAAGRRGAFGAHTIGANGAGSADVV 608 Query: 415 RTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQM 474 +A ++ V L D+ + + G G G+ E + L + R +G V A R Sbjct: 609 LSAEQAELVRRLLADQDLVRVAVGAAG-TGKTEAMRVLTAIVRAEGHPVFATAHGGRQAE 667 Query: 475 NMKQDERLSGELITGRRQLLEGMAFTP----------GSTVIVDQGEKLSLKETLTLLDG 524 + + ++ LL+ + P GS +IVD+ ++ ++ LLD Sbjct: 668 QLADRIGVPARVVASWLTLLDAIDADPARQLADVWPAGSVLIVDEATQVGTRDAERLLDY 727 Query: 525 AARHNVQVLITDSGQRTGTGSALMAMKD--------AGVNTYRWQGGEQRPATIISEPDR 576 AAR V++ + G+ +A + T Q G + Sbjct: 728 AARTGTVVILLGDPAQLGSVAAGGWFLHLIETTPDVPTLTTVHRQAGADMAPIRAALDAL 787 Query: 577 NVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSP 636 AG+ + +T + G TA Sbjct: 788 RAETGTPIAALDRLATAGKIHLVDDPDTLFTQAVTDWYAERRRHLGT--------TAPQT 839 Query: 637 VWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRIS 696 D S P + + ++ + + TL A G ++ Sbjct: 840 QTADGSSGPDGARPPPARPPKPIKTHLMAERHRDVEALNRAAR--TLLTADGTLTGPALT 897 Query: 697 SLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDA-------MTVVV 749 + + G L G+ + G + + DA +TV Sbjct: 898 VAGRDFQVGDEVVTLTQAGHTLIPAGRPGSAYIRTGTIGVITDLHLDADNPPAQTVTVYF 957 Query: 750 PGRAEPAT----LPVSDSPFTALKLENGWVETPGHSVSDSATVFASV-TQMAMDNATLNG 804 P + L L + + T + ++ T Sbjct: 958 PSKGTVVVPWTYLTHQFDDGRDGGLAHAYALTAAKAQGSMMDTARALVTDDTSRAGLYVM 1017 Query: 805 LARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPA 864 L+R+ D+ Y + A + LE + +A P Sbjct: 1018 LSRARTDLAAYLIRRDDLAARDDDENWLPATAGPLDAISRLAGHLERSEPEHTAAARDPI 1077 Query: 865 QQAIHLALPVVESKKLAFSM 884 A H +L Sbjct: 1078 ATAAHQLRATHTLAELTALR 1097 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 117/820 (14%), Positives = 212/820 (25%), Gaps = 141/820 (17%) Query: 876 ESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVA------KGYGTG 929 K F +++ + ++ + + + ++++ A + Sbjct: 470 TEKATTFGRREIVRQIAAWGGDRLDAEAIDRLADRFPADSRVVHLQAAAPGQRRRAQPEP 529 Query: 930 LLVSRASYEAEKSILRHILEGK---------------------------EAVMPLMERVP 962 L + E+ + + EG+ + P Sbjct: 530 LYTVEDMLDTEQRLRAVVREGRVVAGAAPRVLASPRVVDAFLAAADGFAGSTRPAAAGRR 589 Query: 963 GELMEK-------------LTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAV 1009 G L++ Q R +L D V G AG GKT R + + V Sbjct: 590 GAFGAHTIGANGAGSADVVLSAEQAELVRRLLADQDLVRVAVGAAGTGKTEAMRVLTAIV 649 Query: 1010 NMLPESERPRVVGLGPTHRAVGEMRSA-GVDAQTLASFLHDTQLQQRSGETP----DFSN 1064 +E V R ++ GV A+ +AS+L + Sbjct: 650 R----AEGHPVFATAHGGRQAEQLADRIGVPARVVASWLTLLDAIDADPARQLADVWPAG 705 Query: 1065 TLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVA 1124 ++ ++DE++ VG D R A G + GD QL ++A G F + DV Sbjct: 706 SVLIVDEATQVGTRDAERLLDYAARTGTVVILLGDPAQLGSVAAGGWFLHLIETT-PDVP 764 Query: 1125 IMKEIVRQTPEL---REAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSH 1181 + + RQ A + + ++ L+ + + + Sbjct: 765 TLTTVHRQAGADMAPIRAALDALRAETGTPIAALDRLATAGKIHLVDDPDTLFTQAVTDW 824 Query: 1182 SQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLN 1241 E + + P P +T ++ + D LN Sbjct: 825 YAERRRHLGTTAPQTQTADGSSGPDGARPP------PARPPKPIKTHLMAERHRDVEALN 878 Query: 1242 SMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGIS 1301 + G L + V Sbjct: 879 RAARTLLTADGTLTGPALTVA--------------------------------------- 899 Query: 1302 KDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSV 1361 +D + +++ +A + P + + TG T D Sbjct: 900 -------GRDFQVGDEVVTLTQAGHTLIPAGRPGSAYIRTGTIGVIT--DLHLDADNPPA 950 Query: 1362 WTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEG 1421 TVT T+ T + + + AYA+TA AQG+ A AL + Sbjct: 951 QTVTVYFPSKGTVVVP-WTYLTHQFDDGRDGGLAHAYALTAAKAQGSMMDTARALVTDD- 1008 Query: 1422 NRKLMAGFESAYVALSRMKQHVQVY---------TDNRQGWTDAINNAVQKGTAHDVFEP 1472 YV LSR + + Y D+ + W A + + Sbjct: 1009 -----TSRAGLYVMLSRARTDLAAYLIRRDDLAARDDDENWLPATAGPLDAISRLAGHLE 1063 Query: 1473 KPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPARFIAPGRKYPQPYVALPAF 1532 + + E A R A + A + L + R+ P Sbjct: 1064 RSEPEHTAAARD-PIATAAHQLRATHTLAELTALRLSRRIPQPRPGPRRPAAPAPTTARR 1122 Query: 1533 DRNGKSAGIWLNPLTTDDGNGLRGFSGEGRVKGSGDAQFVALQGSRNGESLLADNMQDGV 1592 +G + + T + + A V Q Sbjct: 1123 AGSGSARTPGSSRQTAPNAPFEPSHTAPSAPFEPSRATPVEPQPRATPS----------- 1171 Query: 1593 RIARDNPDSGVVVRIAGEGRPWNPGAITGGRVWGDIPDNS 1632 R AR P+ G P A G G + Sbjct: 1172 RSARSAPNKPADTETGTAGPKAGPAATAGHPYRGGSARSR 1211 >UniRef50_Q46K41 DNA helicase/exodeoxyribonuclease V, alpha subunit n=2 Tax=Prochlorococcus marinus RepID=Q46K41_PROMT Length = 573 Score = 226 bits (575), Expect = 8e-57, Method: Composition-based stats. Identities = 84/624 (13%), Positives = 171/624 (27%), Gaps = 111/624 (17%) Query: 861 HTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYV 920 A I L S+ + + + E + + + + +GD + Sbjct: 30 SNEALIDIVNVLMDGLSRGDVYIDMKKIPENLELKYKDWPSYHMKALLESGWTKGDNSPI 89 Query: 921 DVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMI 980 + + E + IL L R+ + +E L Q A ++ Sbjct: 90 VLNGDLISWRRTHNEIVETIQKILLRNQPINHLSKELPVRIEAKNLEHLNIQQIDAVNLV 149 Query: 981 LETSDRFTVVQGYAGVGKT-TQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA--- 1036 S++ ++ G G GKT T + ++ A+ + + PT +A +++ Sbjct: 150 --KSEQIILLSGGPGTGKTSTILQMLLEALTR---NPTLSIAMAAPTGKAAKKLKDTIQA 204 Query: 1037 --------------GVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMAR 1082 + ++TL +L R L ++DE SMV + + Sbjct: 205 GIEDFDDPIKDKLSNIPSKTLHKWLEAGPNGFRRNSQRLLKLDLIVIDEMSMVDLSTING 264 Query: 1083 AYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYS 1142 + + + GD DQL I G +++ Q + + Q+ Sbjct: 265 LLDALTKS-CQIILVGDPDQLLPIGSGGIWQILQEKE-------TKTNFQS--------- 307 Query: 1143 LINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFP 1202 SVK ++ R +G A ++ + K + Sbjct: 308 -------------NSVKLTKSYRNKGDIALLRNI-------------LKDKGVDAFWQLL 341 Query: 1203 DVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVP 1262 + Y + ++ E + Sbjct: 342 SKKEDSTNTL--HYLSSIKSIPDP----------VVRTLVSYRKKLKELTENCINYIPDE 389 Query: 1263 VLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPR 1322 ++ I + + D L+++ + G+ K + + E Sbjct: 390 AWQSSMIEVDQSVEIQKLFKFIDNLLILCPQRYGPWGVKKIHEFLLGKRFEKEVHKW--- 446 Query: 1323 EAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDS---VTLSDGQQ 1379 G + + E G V + + +Q Sbjct: 447 -----------------GEATPIMAKSNQPEIGLANGDVGVIIGNGEKRRFLFNVFSEEQ 489 Query: 1380 TREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEG----------NRKLMAGF 1429 R D AYA+T H AQG+ + L T Sbjct: 490 RLVTRLINPSRLNRYDAAYAMTIHKAQGSEADQVLLLWPTTSKVSEEKTSNKFYSDDYEK 549 Query: 1430 ESAYVALSRMKQHVQVYTDNRQGW 1453 Y A++R K+ + V T+ + + Sbjct: 550 RMLYTAITRAKKQLMVITNKEEDF 573 Score = 131 bits (328), Expect = 3e-28, Method: Composition-based stats. Identities = 51/506 (10%), Positives = 132/506 (26%), Gaps = 70/506 (13%) Query: 365 ISREQLIPLDRE--KGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYSDA 422 + LI R + + T +L + LS+++ V + + DA Sbjct: 90 VLNGDLISWRRTHNEIVETIQKILLRNQPINHLSKEL----PVRIEAKNLEHLNIQQIDA 145 Query: 423 VSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQG-REVQIIAADRRSQMNMKQD-- 479 V+++ + ++SG G + L+ + + A ++ +K Sbjct: 146 VNLV--KSEQIILLSGGPGTGKTSTILQMLLEALTRNPTLSIAMAAPTGKAAKKLKDTIQ 203 Query: 480 --------------ERLSGELITGRRQ------LLEGMAFTPGSTVIVDQGEKLSLKETL 519 + + + + +++D+ + L Sbjct: 204 AGIEDFDDPIKDKLSNIPSKTLHKWLEAGPNGFRRNSQRLLKLDLIVIDEMSMVDLSTIN 263 Query: 520 TLLDGAARHNVQVLITDSGQR--TGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPD-- 575 LLD + +L+ D Q G+G +++ T + + ++ D Sbjct: 264 GLLDALTKSCQIILVGDPDQLLPIGSGGIWQILQEKETKTNFQSNSVKLTKSYRNKGDIA 323 Query: 576 --RNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTA 633 RN+ + F + E+S + + + + L + ++ Sbjct: 324 LLRNILKDKGVDAFWQLLSKKEDSTNTLHYLSSIKSIPDPVVRTLVS----YRKKLKELT 379 Query: 634 LSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVV 693 + + + M +E + ++ G V Sbjct: 380 ENCINYIPDEAWQSSMIEVDQSVEIQKLFKFIDNLLILCPQR-----------YGPWGVK 428 Query: 694 RISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTV--VVPG 751 +I F E + + P + ++ GD + E + V Sbjct: 429 KIHEFLLGKR-FEKEVHKWGEATPIMAKSNQPEIGLANGDVGVIIGNGEKRRFLFNVFSE 487 Query: 752 RAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFA---------------SVTQMA 796 T ++ S + + Sbjct: 488 EQRLVTRLINPSRLNRYDAAYAMTIHKAQGSEADQVLLLWPTTSKVSEEKTSNKFYSDDY 547 Query: 797 MDNATLNGLARSGRDVRLYSSLDETR 822 + R+ + + + ++ +E Sbjct: 548 EKRMLYTAITRAKKQLMVITNKEEDF 573 >UniRef50_C4L7B4 Exodeoxyribonuclease V, alpha subunit n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4L7B4_TOLAT Length = 632 Score = 226 bits (574), Expect = 1e-56, Method: Composition-based stats. Identities = 88/641 (13%), Positives = 176/641 (27%), Gaps = 102/641 (15%) Query: 869 HLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGT 928 LA + + A S + A + + + + + ++G L + Sbjct: 67 RLAQWQAQLSQAALSWPETTVAALDAKLQQSPLVRVITDPSDAEEQGQPLTLF------A 120 Query: 929 GLLVSRASYEAEKSILRHILEGKEAVMPLMERVP-GELMEKLTSGQ----RAATRMILET 983 G L + E+ + + + + + +L + Q A + Sbjct: 121 GRLYLSRYFRFEQQVACWLQQASLPADNAVNATELAAQLRQLFTPQPETDWQAVAVATAC 180 Query: 984 SDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA------- 1036 RFT++ G G GKTT +++ + E + PT +A + + Sbjct: 181 EGRFTLISGGPGTGKTTTVTKLLALLVAQSEQS-LLIRLAAPTGKAAARLTESIAKAKTE 239 Query: 1037 -----------GVD--AQTLASFLHDTQLQ--QRSGETPDFSNTLFLLDESSMVGNTDMA 1081 G+ A TL L Q R + ++DE+SM+ MA Sbjct: 240 LATQVNADWLEGIPTQASTLHRLLGVIPGQPEFRHHAQNPLPLDVLVVDEASMIDLPMMA 299 Query: 1082 RAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVY 1141 R R + GD DQL ++ G Sbjct: 300 RLL-AALPPQARLILLGDKDQLASVEAGAVLGDICRF----------------------- 335 Query: 1142 SLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAF 1201 + + L+ + + + A L Sbjct: 336 -VAQGISQPQAECLQQRTGYDLQPYVQVTGHPLCDRLCLLRKSWRFAADSGIGKLAEAVN 394 Query: 1202 PDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMV 1261 T RDY + EQ + Sbjct: 395 NGDEKTAQAVWTRDYRDIRLHSDEQ------------------RLEMAVKLAAEGYHAYL 436 Query: 1262 PVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISP 1321 +L+ +G + L + R L D GI+ + I + ++ Sbjct: 437 ALLDKPMSAEGAVALLQAFNQIRLLCALHDG----PWGINGMNQAIGQRLQTQGRLQMTA 492 Query: 1322 REAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTR 1381 + T++D G + + A G+ + + Sbjct: 493 DWFAGR----------------PVMITENDYGLGLYNGDIG-IAASDGERLRVWFVLPDG 535 Query: 1382 EIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQ 1441 + D A+A+T H +QG+ T + L E N + E Y ++R ++ Sbjct: 536 KAHGFLPSRLPAHDTAWAMTVHKSQGSEFTHTLLLLPPETN--PLLTRELLYTGITRARE 593 Query: 1442 HVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAE 1482 + ++ + + ++ + V + R + +AE Sbjct: 594 QLDLFAT-PEVLALMVRKQTERYSGL-VTMLETMRALHDAE 632 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 67/601 (11%), Positives = 147/601 (24%), Gaps = 83/601 (13%) Query: 283 ETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLAR 342 + + R RD Q A L S + + + + Sbjct: 13 QALLEARLLRDLDVQLAQLLARWDADESVQLAVALTSQELGRGHVCFDLSTWPER-LAQW 71 Query: 343 TVGILPPENGVIERARAGIDEAISREQLIPLDRE---------------KGLFTSGIH-- 385 + E A +D + + L+ + + L+ S Sbjct: 72 QAQLSQAALSWPETTVAALDAKLQQSPLVRVITDPSDAEEQGQPLTLFAGRLYLSRYFRF 131 Query: 386 -------VLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSG 438 + + + + P T + AV+ + R +L Sbjct: 132 EQQVACWLQQASLPADNAVNATELAAQLRQLFTPQPETDWQAVAVATACEGRFTLISGGP 191 Query: 439 QGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQD-----------------ER 481 G ++ L++ EQ +++ A ++ + + E Sbjct: 192 GTGKTTTVTKLLALLVAQSEQSLLIRLAAPTGKAAARLTESIAKAKTELATQVNADWLEG 251 Query: 482 LS--GELITGRRQLLEGMAFTPG--------STVIVDQGEKLSLKETLTLLDGAARHNVQ 531 + + ++ G ++VD+ + L LL Sbjct: 252 IPTQASTLHRLLGVIPGQPEFRHHAQNPLPLDVLVVDEASMIDLPMMARLLAALPPQARL 311 Query: 532 VLITDSGQR--TGTGSALMAMKDAGVNTY--------RWQGGEQRPATIISEPDR-NVRY 580 +L+ D Q G+ L + + + G + R Sbjct: 312 ILLGDKDQLASVEAGAVLGDICRFVAQGISQPQAECLQQRTGYDLQPYVQVTGHPLCDRL 371 Query: 581 ARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLD 640 L + + +G +A+ ++ QA+ + L E L+ Sbjct: 372 CLLRKSWRFAADSGIGKLAEAVNNGDEKT-AQAVWTRDYRDIRLHSDE--------QRLE 422 Query: 641 SRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDS 700 + + Y + + P + ++ L G + ++ Sbjct: 423 MAVKLAAEGYHAYLALLD-KPMSAEGAVALLQAFNQIR--LLCALHDGPWGINGMNQAIG 479 Query: 701 SWSLFRPE---KMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPAT 757 + G + +T GL + GD AS E V + Sbjct: 480 QRLQTQGRLQMTADWFAGRPVMITENDYGLGLYNGDIGIAASDGERLRVWFVLPDGKAHG 539 Query: 758 LPVSDSPFTALKLENGWVETPGHSVSDSATVF---ASVTQMAMDNATLNGLARSGRDVRL 814 S P A + T+ + G+ R+ + L Sbjct: 540 FLPSRLP--AHDTAWAMTVHKSQGSEFTHTLLLLPPETNPLLTRELLYTGITRAREQLDL 597 Query: 815 Y 815 + Sbjct: 598 F 598 >UniRef50_A8L8Y0 TrwC relaxase n=1 Tax=Frankia sp. EAN1pec RepID=A8L8Y0_FRASN Length = 1549 Score = 226 bits (574), Expect = 1e-56, Method: Composition-based stats. Identities = 146/910 (16%), Positives = 279/910 (30%), Gaps = 123/910 (13%) Query: 53 TRLLEGRLPDGADLSRMQDGSNR---------HRPGYDLTFSAPKSVSMMAMLGGDK--- 100 RL R PD +D R G+D+ + PKS+S++ + G D+ Sbjct: 252 ARLAAERDPDSGRWRVARDELIRFVEQREPPTVVIGFDVVCAVPKSLSLLWVFGDDELRR 311 Query: 101 RLIDAHNQAVDFAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHA 160 + ++ N AVD +E A+ ++ S L A + HD SR E LH H Sbjct: 312 DIENSMNAAVDAVFTYLERHAAQGMVG---SRNHPGLGLAAASYLHDVSRADEAHLHIHN 368 Query: 161 VVANVTQH---NGEWKT-----LSSDKVGKTGFIENVYANQIAFGRLYREKLKEQV-EAL 211 +VAN + + + + E A+ G + L+ ++ Sbjct: 369 IVANAVAIPVLDETGRPERDPVGGARVEWRALDSELFLAHARTAGFVGAAVLRHELARRR 428 Query: 212 GYETEVVGKHGMWEMPGVPVE---AFSGRSQTIREAVGED------ASLKSRDVAALDTR 262 G V ++G+ E+ P E AFS R ++E +G+ + ++ A +R Sbjct: 429 GVTWAPV-RNGVAELEDFPTELLAAFSTRHGQVQEELGQLVAQGMLSDGRTEAAAQRRSR 487 Query: 263 KSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQ 322 +K+ + A + L E G+ RD A +R + + D Sbjct: 488 AAKKVLADAEVHAVQERRLTEAGWHPSQVRDLARRRDRVPVQPTAVDLAELADRLMGP-- 545 Query: 323 AIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGL--- 379 GL+ + F DV +D+ ++ +++ ++ Sbjct: 546 --QGLTAKAPTFDRRDVYREVAAWACDR-LDAHAISTVVDQLLADPRIVRFEQHSARRRH 602 Query: 380 -----FTSGIHVLDELSVRALSRDIMKQNRVTVHP---------------------EKSV 413 F++ + E S+ +L R V Sbjct: 603 RGEETFSTEDLLDTEDSLLSLCRQGRVDRGGPPRTLIPPAAVEAALSGDGDGALGGIPGV 662 Query: 414 PRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQ 473 + D V L D + +V G G +G+ + + + +G V A R Sbjct: 663 RLSGEQQDLVRRLLTDDDLVRLVVGPAG-SGKTAAMRTVARVLAARGVTVLGAAHGGRQA 721 Query: 474 MNMKQDERLSGELITGRRQLLEGMA-----FTPGSTVIVDQGEKLSLKETLTLLDGAARH 528 + + +++G LL+ + + +IVD+ ++S ++ L A R Sbjct: 722 EQLAATLEVETRVVSGWLTLLDHTEDPASYWPDDTVLIVDEASQVSTRDAERFLRYATRT 781 Query: 529 NVQVLITDSGQR---TGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAG 585 V++ + G G + QR + A LAG Sbjct: 782 GTVVILVGDPAQLGSVGAGGWFAHLVTETTPPQLTGTHRQRGPGM------AEVRAALAG 835 Query: 586 DFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRY 645 +A +V S L G + L + LS D + Sbjct: 836 LRSALPAEAMAAV-----------------SSLARSGHVRLFDDRAALLSTAVSDWYTER 878 Query: 646 LRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLF 705 + M+ E +D + + A G +++ + Sbjct: 879 RQAGRATPMMAEHQRD---------VDALNTAARD--ALTADGTLTGPVLTAAGREYQTG 927 Query: 706 RPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASV-------SEDAMTVVVPGRA--EPA 756 G L G+ G + G ++ +V ++TV PG+ + Sbjct: 928 DEVITLTQAGHTLIPAGRPRGDYIRTGTIGRIVAVRIDPSRPQHQSVTVRFPGKGTVDVG 987 Query: 757 TLPVSDSPFTALK--LENGWVETPGHSVSDS-ATVFASVTQMAMDNATLNGLARSGRDVR 813 ++ L + + T + + +T + L+R+ + ++ Sbjct: 988 WDYLTHPFPDGRDGGLGHAYALTAHKAQGSTMSTARPLIVDDTSRPGLYVMLSRAQQRLQ 1047 Query: 814 LYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALP 873 Y A+ + + R E + L AQ A L Sbjct: 1048 AYLIRRPDLEADLDDEDWLPVLPIDSAVDRLAERLRTSRAERLAGDLDPIAQTAHRLGSS 1107 Query: 874 VVESKKLAFS 883 ++ LA Sbjct: 1108 HSLAELLALD 1117 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 149/1092 (13%), Positives = 277/1092 (25%), Gaps = 154/1092 (14%) Query: 709 KMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTA- 767 + G R+ L ++ + + A + + Sbjct: 386 ERDPVGGARVEWRALDSELFLAHARTAGFVGAAVLRHELARRRGVTWAPVRNGVAELEDF 445 Query: 768 -LKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEK 826 +L + G + + A L + + Sbjct: 446 PTELLAAFSTRHGQVQEELGQLVAQGMLSDGRTEAAAQRRSRAAKKVLADAEVHAVQERR 505 Query: 827 LARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVD 886 L + R ++ A K F D Sbjct: 506 LTEAGWHPSQVRDLARRRDRVPVQPTAVDLAELADRLMGPQGLTA------KAPTFDRRD 559 Query: 887 LLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVD----VAKGYGTGLLVSRASYEAEKS 942 + E ++A + + ++ + ++ + + G + + E S Sbjct: 560 VYREVAAWACDRLDAHAISTVVDQLLADPRIVRFEQHSARRRHRGEETFSTEDLLDTEDS 619 Query: 943 ILRHILEGK----EAVMPLMERVPGEL--------------MEKLTSGQRAATRMILETS 984 +L +G+ L+ E +L+ Q+ R +L Sbjct: 620 LLSLCRQGRVDRGGPPRTLIPPAAVEAALSGDGDGALGGIPGVRLSGEQQDLVRRLLTDD 679 Query: 985 DRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAG-VDAQTL 1043 D +V G AG GKT R V + + V+G R ++ + V+ + + Sbjct: 680 DLVRLVVGPAGSGKTAAMRTVARVLA----ARGVTVLGAAHGGRQAEQLAATLEVETRVV 735 Query: 1044 ASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQL 1103 + +L + +T+ ++DE+S V D R G + GD QL Sbjct: 736 SGWLTLLDHTEDPASY-WPDDTVLIVDEASQVSTRDAERFLRYATRTGTVVILVGDPAQL 794 Query: 1104 QAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQV 1163 ++ G F T + + RQ +V AL+GL S P++ Sbjct: 795 GSVGAGGWFAHLVTETTPP--QLTGTHRQRGPGMA--------EVRAALAGLRSALPAEA 844 Query: 1164 PRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEA 1223 + A V F D L V D+ +A Sbjct: 845 MAAVSSLARSGHVRLF-----------------------DDRAALLSTAVSDWYTERRQA 881 Query: 1224 REQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETH 1283 T ++ D LN+ D G L + Sbjct: 882 GRATPMMAEHQRDVDALNTAARDALTADGTLTGPVLTAA--------------------- 920 Query: 1284 RDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGD 1343 ++ + +I+ +A + P + TG Sbjct: 921 -------------------------GREYQTGDEVITLTQAGHTLIPAGRPRGDYIRTGT 955 Query: 1344 RMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAH 1403 R + + TV +V D P + + + AYA+TAH Sbjct: 956 IGRIVAVRIDPSRPQHQSVTVRFPGKGTV---DVGWDYLTHPFPDGRDGGLGHAYALTAH 1012 Query: 1404 GAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQK 1463 AQG++ + A L + +R YV LSR +Q +Q Y R +++ Sbjct: 1013 KAQGSTMSTARPLIVDDTSRPG------LYVMLSRAQQRLQAYLIRRPDLEADLDDEDWL 1066 Query: 1464 G-----TAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAG--LAGGDSPARFI 1516 +A D + AERL + A LA Sbjct: 1067 PVLPIDSAVDRLAERL--RTSRAERLAGDLDPIAQTAHRLGSSHSLAELLALDSPTGPRG 1124 Query: 1517 APGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGEGRVKGSGDAQFVALQG 1576 + + + + + + G + D AL Sbjct: 1125 SETERPGATVLRRAQIAAQARVTAAAVAAPEPALLARIGPRPEAGPHRLLWDRAVSALAT 1184 Query: 1577 SRNGESLLADNMQDGVRIARDNPDSG------VVVRIAGEGRPWNPGAITGGRVWGDIPD 1630 R + A G R + D+G + + W G + Sbjct: 1185 YRAAHAPAAPADDPGPRPEPGHQDTGAQRWKRLRGQATMLADAWATRLSAGAARRFATGE 1244 Query: 1631 NSVQPGAGNG--EPVTAEVLAQRQAEEAIRRETERRADEIVRKMAENKPDLPDGKTEQ-- 1686 +V + R + + + A + L Sbjct: 1245 EAVPRRRSVAGIHALLDAGWDARDLLAKLGEQEQTTARTGASVLDHRVAVLCARARLDIA 1304 Query: 1687 ----AVREIAGQERDRAAITEREAALPEGVLR-------EPQRVREAVREIARENLLQER 1735 + A + A A R E + + +R ++ L+ Sbjct: 1305 AFQLPAPQTAAEAWHAATTLLGSAESRYLATRPTADLAAEERLLGRVLRMTRNDDELRAH 1364 Query: 1736 LQQMERDMVRDL 1747 L R M D Sbjct: 1365 LLTRIRRMEADH 1376 >UniRef50_A6DHN1 ATP-dependent exoDNAse (Exonuclease V), alpha subunit-helicase superfamily I member n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DHN1_9BACT Length = 737 Score = 226 bits (574), Expect = 1e-56, Method: Composition-based stats. Identities = 70/381 (18%), Positives = 124/381 (32%), Gaps = 18/381 (4%) Query: 799 NATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKS 858 L GL + R L R+A + +P S + L + + + Sbjct: 166 KVFLQGLGLTARQCSLIMEQYGDRSAAIIKDNPYILAESIRGIGFIQADKLAQNLGIEAT 225 Query: 859 ALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLL 918 A +H + LL +A + + IK G ++ Sbjct: 226 NPFRTASGIVHTVKVQSQDGHTCMPREFLLNKASEML--KVDTANILEGLQRAIKDGSII 283 Query: 919 YVDVAKGYGTGLLVSRASYEAEKSILRHILE--GKEAVMPLMERVPGELMEKLTSGQRAA 976 L R + E+S+L H+L + P + L +L + Q+ A Sbjct: 284 EE---VHQEMSYLYERHLHNDEESLLDHLLGFIKLDKQYPHAQSEVDFLNSELNTEQKQA 340 Query: 977 TRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA 1036 + R +++ G GVGKTT + ++ ++ PT RA + A Sbjct: 341 VNTSF--NKRLSIITGGPGVGKTTTVKEIV----QQSRKHGKKIKLAAPTGRAAQRLGEA 394 Query: 1037 -GVDAQTLASFL---HDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGG 1092 G A T+ L +++ + E + ++DE SM+ + + +A I Sbjct: 395 SGARALTIHRLLMSDSESEGEFVFNEYKKLKCDILVVDEVSMLDISLARKLFAAIDHNET 454 Query: 1093 RAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAV-YSLINRDVERA 1151 V GD DQL ++ PG + + ++ RQ R IN E Sbjct: 455 HLVLVGDPDQLPSVGPGFVLNDLIESQLIPLTALHQVFRQASSSRIITNAHRINLGQEPD 514 Query: 1152 LSGLESVKPSQVPRQEGAWAP 1172 L +E + Sbjct: 515 LRQIEGDHNDFYFIHQDDPEK 535 Score = 209 bits (532), Expect = 7e-52, Method: Composition-based stats. Identities = 69/584 (11%), Positives = 158/584 (27%), Gaps = 71/584 (12%) Query: 289 RAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSE-RKVQFTYTDVLARTVGIL 347 + R +AD G + + + + S+ +L + +L Sbjct: 203 ESIRGIGFIQADKLAQNLGIEATNPFRTASGIVHTVKVQSQDGHTCMPREFLLNKASEML 262 Query: 348 PPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLD-ELSVRALSRDIMKQNRVT 406 G+ AI +I ++ + H+ + E S+ +K ++ Sbjct: 263 K---VDTANILEGLQRAIKDGSIIEEVHQEMSYLYERHLHNDEESLLDHLLGFIKLDKQY 319 Query: 407 VHPEKSV-----PRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGR 461 H + V AV+ L+I++G G G+ V E+V +R+ G+ Sbjct: 320 PHAQSEVDFLNSELNTEQKQAVN--TSFNKRLSIITGGPGV-GKTTTVKEIVQQSRKHGK 376 Query: 462 EVQIIAADRRSQMNMKQDERLSGELITGRR---------QLLEGMAFTPGSTVIVDQGEK 512 ++++ A R+ + + I + ++VD+ Sbjct: 377 KIKLAAPTGRAAQRLGEASGARALTIHRLLMSDSESEGEFVFNEYKKLKCDILVVDEVSM 436 Query: 513 LSLKETLTLLDGAARHNVQVLITDSGQR---TGTGSALMAMKDAGVNTYRWQGGEQRPAT 569 L + L + +++ + G G L + ++ + R A+ Sbjct: 437 LDISLARKLFAAIDHNETHLVLVGDPDQLPSVGPGFVLNDLIESQLIPLTALHQVFRQAS 496 Query: 570 IISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEV 629 R L + G+ + + L I +K + Sbjct: 497 SSRIITNAHRIN-LGQEPDLRQIEGDHNDFYFIHQDDPEKLFPMISKMIKER-------- 547 Query: 630 TMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGE 689 + + + M M + + + Y+ + + Sbjct: 548 ---------IPQKFDISAKDIQILMPMNRGKCGCEALNLYLQEDLN-------------- 584 Query: 690 TQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVV 749 D F K G+R+ T +V GD + + + + ++ Sbjct: 585 ---------DIHKKQFNFGKSRFILGDRVIQTVNNYTKKVFNGDMGYIVDIYNEEKSFII 635 Query: 750 PGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQ---MAMDNATLNGLA 806 + ++L A + T M N + Sbjct: 636 DFDG--LQVSYDFEEAEQIRLAYAITIHKSQGSEFPAVIVPMNTSHYIMLKKNLLYTAIT 693 Query: 807 RSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLE 850 R+ + L SS + + + T+ + Sbjct: 694 RAKELLVLCSSRQAISQCIANKGMSKRFTLLKYKLQISQITTCQ 737 Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats. Identities = 62/368 (16%), Positives = 112/368 (30%), Gaps = 33/368 (8%) Query: 1119 SAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTE 1178 +KEIV+Q+ + + + L A E+ + + S E Sbjct: 357 GVGKTTTVKEIVQQSRKHGKKI-KLAAPTGRAAQRLGEASGARALTIHRLLMSDSESEGE 415 Query: 1179 FSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRR 1238 F ++ KL + L+ AI + T L Sbjct: 416 FVFNEYKKLKCDILVVDEVSMLDISLARKLFAAIDHNETHLVLVGDPDQL---PSVGPGF 472 Query: 1239 VLNSMIHDVREKAGELG------------KEQVMVPVLNTANIRDGELRRLSTWETHRDA 1286 VLN +I L + + ++R E + H+D Sbjct: 473 VLNDLIESQLIPLTALHQVFRQASSSRIITNAHRINLGQEPDLRQIEGDHNDFYFIHQDD 532 Query: 1287 L--------VLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIR 1338 ++ + IS D I + G + + E + Sbjct: 533 PEKLFPMISKMIKERIPQKFDISAKDIQILMPMNRGKCGCEALNLYLQEDLNDIHKKQFN 592 Query: 1339 VGTG-----DRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQH 1393 G DR+ T ++ + + + + + + ++ E+AEQ Sbjct: 593 FGKSRFILGDRVIQTVNNYTKKVFNGDMGYIVDIYNEEKSFIIDFDGLQVSYDFEEAEQ- 651 Query: 1394 IDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGW 1453 I LAYAIT H +QG+ I T +M Y A++R K+ + + +RQ Sbjct: 652 IRLAYAITIHKSQGSEFPAVIVPMNTS--HYIMLKKNLLYTAITRAKELLVL-CSSRQAI 708 Query: 1454 TDAINNAV 1461 + I N Sbjct: 709 SQCIANKG 716 >UniRef50_Q3B2W0 Helicase RecD/TraA n=19 Tax=Bacteria RepID=Q3B2W0_PELLD Length = 739 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 92/596 (15%), Positives = 171/596 (28%), Gaps = 55/596 (9%) Query: 795 MAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAIS 854 M + G R+ + ++Y + R P ++ +I Sbjct: 168 MMFLQSHGVGTTRALKIYKVYGADSIGAI----NRDPYRLSRDIAGIGFRTADAIAQSIG 223 Query: 855 HQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKR 914 + + + LL A+ + L + + Sbjct: 224 IAADSPLRARAGMSWVLQELSSKGHCRVPEPMLLDAARQLL--QIPDSVLEEALQVECAA 281 Query: 915 GDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILE--------GKEAVMPLMERVPGELM 966 G ++ V ++AE+ ++ I G+ V + Sbjct: 282 GRIVAV---LEGEERYCYLEYLWKAEQGVVEGIRRIAGGKLPWGRLDVERSVTEAEERSR 338 Query: 967 EKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPT 1026 +L+ QR A R+ L ++ ++ G GVGKTT R ++S +PE +V+ PT Sbjct: 339 LELSVSQREAVRLALS--NKLLIITGGPGVGKTTIIRTLLS----IPEVFGLKVLLTAPT 392 Query: 1027 HRAVGEMRSA-GVDAQTLASFLHDTQLQQRSGE--TPDFSNTLFLLDESSMVGNTDMARA 1083 RA + A G + +T+ L L ++DE+SM+ M R Sbjct: 393 GRAAKRLSEATGREGRTIHRLLEFDPATFDFKRSAHNPLEADLVIVDEASMIDVVLMNRL 452 Query: 1084 YALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSL 1143 I + +GD DQL + PG + V + EI RQ + Sbjct: 453 LPAI-PKNAALILAGDVDQLPPVGPGAVLSDLISSGTVRVVRLTEIFRQAATSLIIQNAH 511 Query: 1144 INRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPD 1203 E L R EG + E S S + + Q A E F Sbjct: 512 RVNRGEGLL------------RHEGPGLGDFYFVESSSSDDIRRKLVQIVAERIPERFGL 559 Query: 1204 VPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPV 1263 P+ + + TP R LN ++ + G E+ V Sbjct: 560 DPLDDIQVL-------TPMNRGPL--------GAESLNVLLQERLNGGGGKRIERFGVAY 604 Query: 1264 LNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPRE 1323 + ++ + + D + Q E + + Sbjct: 605 GRGDKVIQTVNNYEKEVFNGDIGIISAIDHEEGELQVLFDGREVRYQTGELDEMAPAWAI 664 Query: 1324 AVAEGVTLYTPD-TIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQ 1378 + + P I + ++ + ++ L+ G+ Sbjct: 665 TIHKSQGSEYPAVVIPLSMLHYPMLERNLIYTALTRGRKLVMVIGEEKALRLAVGK 720 Score = 194 bits (492), Expect = 3e-47, Method: Composition-based stats. Identities = 80/711 (11%), Positives = 179/711 (25%), Gaps = 114/711 (16%) Query: 166 TQHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQ-VEALG------------ 212 + G W+ G+ E++ L ++ +G Sbjct: 69 VEALGRWQ--DDRNWGRQFKAESLSVIAPESREGMERYLASGMLKGVGPHLASLMMSAWG 126 Query: 213 ---YETEVVGKHGMWEMPGVPVEA----FSGRS-----QTIREAVGEDASLKSRDVAALD 260 ++ + ++PG+ + + I + +R AL Sbjct: 127 TDVFQIIETDPERLRDIPGIGPKKQALIVESWREHQAVREIMMFLQSHGVGTTR---ALK 183 Query: 261 TRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAV 320 K + + ++ + AD + G A+ + + Sbjct: 184 IYKVYGADSIGAINRDPYRLSRDIA-------GIGFRTADAIAQSIGIAADSPLRARAGM 236 Query: 321 TQAIAGLSER-KVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGL 379 + + LS + + +L +L + V+E A E + + L+ E+ Sbjct: 237 SWVLQELSSKGHCRVPEPMLLDAARQLLQIPDSVLEEALQV--ECAAGRIVAVLEGEERY 294 Query: 380 FTSGIHVLDELSVRALSRDIMK-----------QNRVTVHPEKSVPRTAGYSDAVSVLAQ 428 E V R I ++ + + +AV + Sbjct: 295 CYLEYLWKAEQGVVEGIRRIAGGKLPWGRLDVERSVTEAEERSRLELSVSQREAVRLALS 354 Query: 429 DRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELIT 488 ++ ++ G G+ + L+ + G +V + A R+ + + G I Sbjct: 355 NK---LLIITGGPGVGKTTIIRTLLSIPEVFGLKVLLTAPTGRAAKRLSEATGREGRTIH 411 Query: 489 GRRQLLEGM--------AFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR 540 + VIVD+ + + LL ++ +L D Q Sbjct: 412 RLLEFDPATFDFKRSAHNPLEADLVIVDEASMIDVVLMNRLLPAIPKNAALILAGDVDQL 471 Query: 541 --TGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESV 598 G G+ L + +G R A R R G + Sbjct: 472 PPVGPGAVLSDLISSGTVRVVRLTEIFRQAATSLIIQNAHRVNRGEGLLRHEGPGLGDFY 531 Query: 599 AQVSGVRE--QAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVM 656 S + + L Q + + + L + + L+P+ + + Sbjct: 532 FVESSSSDDIRRKLVQIVAERIPERFGLDPLDD-IQVLTPMNRGP---LGAESLNVLLQE 587 Query: 657 EQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGE 716 + +R+ + T+ + + V +G+ Sbjct: 588 RLNGGGGKRIERFGVAYGRGDKVIQTVNNY----------------------EKEVFNGD 625 Query: 717 RLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVE 776 ++++ + + V + + Sbjct: 626 -----------------IGIISAIDHEEGELQVLFDGRE--VRYQTGELDEMAPAWAITI 666 Query: 777 TPGHSVSDSATVFA---SVTQMAMDNATLNGLARSGRDVRLYSSLDETRTA 824 A V M N L R + V + R A Sbjct: 667 HKSQGSEYPAVVIPLSMLHYPMLERNLIYTALTRGRKLVMVIGEEKALRLA 717 Score = 106 bits (263), Expect = 9e-21, Method: Composition-based stats. Identities = 24/127 (18%), Positives = 51/127 (40%), Gaps = 6/127 (4%) Query: 1343 DRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITA 1402 D++ T ++ E+ + ++A+ + L RE+R + ++ + A+AIT Sbjct: 608 DKVIQTVNNYEKEVFNGDIGIISAIDHEEGELQVLFDGREVRYQTGELDE-MAPAWAITI 666 Query: 1403 HGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINN--A 1460 H +QG+ + M Y AL+R ++ V V + + A+ + Sbjct: 667 HKSQGSEYPAV--VIPLSMLHYPMLERNLIYTALTRGRKLVMVIGEEK-ALRLAVGKCSS 723 Query: 1461 VQKGTAH 1467 + T Sbjct: 724 KGRLTGL 730 >UniRef50_B0SIS5 Exodeoxyribonuclease V, alpha subunit n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SIS5_LEPBA Length = 600 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 71/545 (13%), Positives = 160/545 (29%), Gaps = 83/545 (15%) Query: 951 KEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVN 1010 + + ++ + E KL QR + ++ ++ F V+ G G GKTT ++ A + Sbjct: 106 ADQIKTIISGLETESKIKLAEEQRETIQDVITSN--FRVISGGPGTGKTTVVSFILMAFD 163 Query: 1011 MLPESERP-RVVGLGPTHRAVGEMRSA----------------GVDAQTLASFLHDTQ-- 1051 L R+ + PT RA + + QT+ + L Sbjct: 164 RLKLLPSMERIALVAPTGRASQRLTESIQRNLEKFQADPSLTSNFRGQTIHNLLKINPTT 223 Query: 1052 LQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQP 1111 Q + GE ++DE+SMV M ++ I + GD +QL ++ G+ Sbjct: 224 NQAKFGEKRYLPYDFIIMDETSMVDLKLMNLFFSAIHF-DTHIILLGDPNQLPSVGQGEV 282 Query: 1112 FRLQQTRSAAD---VAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEG 1168 T ++ + R + + +V++ I V+++ + KP +P+ Sbjct: 283 LTDLITTLKNKKEFLSELNSNHRFSNDSEFSVFAEI---VKQSFDTNSNTKPFPLPKMIT 339 Query: 1169 AWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTL 1228 + K + + + +T ++ Sbjct: 340 KSDLNLKHDFVWIQGDKKTKSTNGNHPEIHDWNIESMVPFLWETFYLHTA-NKTSKFHWE 398 Query: 1229 IVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALV 1288 + + + I + L + + +R + + + Sbjct: 399 PNALKDPKNKFIFESIVNEYRCLTILRNGYFGIEAIQGQILRYAKKQLTNPKNEFHLKYR 458 Query: 1289 LVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFT 1348 + ++ G + Sbjct: 459 QLSKSFY--------------------------------------------FEGMPIIIQ 474 Query: 1349 KSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGA 1408 +D R + V ++ + + R + H + A+ +T H +QG+ Sbjct: 475 SNDPMRKLFNGDIGLVVSIH-SELRAVFPIEDRLYSFALDTLPDH-EPAFFLTIHKSQGS 532 Query: 1409 SETFAIALEGTE-------GNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAV 1461 + N + Y A++R K+ V + + Q W + + Sbjct: 533 EYKSILLYLPPMNVLDVDSENNLSILNRRILYTAITRAKERVILL-GDFQTWEFGLQSFR 591 Query: 1462 QKGTA 1466 ++ T Sbjct: 592 KRYTG 596 Score = 111 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 51/502 (10%), Positives = 126/502 (25%), Gaps = 71/502 (14%) Query: 376 EKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAI 435 E LFT H ++ ++ D +K + E + + + + + Sbjct: 85 ESLLFTFLNHKTNQTKNTTITADQIKTIISGLETESKIKLAEEQRETIQDVITSNFRVIS 144 Query: 436 VSGQGGAAGQRERVAELVMMAREQGR-----EVQIIAADRRSQMNMKQD----------- 479 G G+ V+ ++M + ++A R+ + + Sbjct: 145 ---GGPGTGKTTVVSFILMAFDRLKLLPSMERIALVAPTGRASQRLTESIQRNLEKFQAD 201 Query: 480 ----ERLSGELITGRRQL--------LEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAAR 527 G+ I ++ + P +I+D+ + LK Sbjct: 202 PSLTSNFRGQTIHNLLKINPTTNQAKFGEKRYLPYDFIIMDETSMVDLKLMNLFFSAIHF 261 Query: 528 HNVQVLITDSGQRTGTGS--ALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAG 585 +L+ D Q G L + T + + + ++ A Sbjct: 262 DTHIILLGDPNQLPSVGQGEVLTDLI----TTLKNKKEFLSELNSNHRFSNDSEFSVFAE 317 Query: 586 DFAASVKAGEESVAQVSG---------------VREQAILTQAIRSELKTQGVLGLPEVT 630 S + + T++ + + Sbjct: 318 IVKQSFDTNSNTKPFPLPKMITKSDLNLKHDFVWIQGDKKTKSTNGNHPEIHDWNIESMV 377 Query: 631 MTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSH--DRYVIDRVTAQSHSLTLRDAQG 688 +L + ++ + + P + + N + Y + + + QG Sbjct: 378 PFLWETFYLHTANKTSKFHWEPNALKDPKNKFIFESIVNEYRCLTILR-NGYFGIEAIQG 436 Query: 689 ETQVVRISSLDSSWSLFRPEKMP-----VADGERLRVTGKIPGLRVSGGDRLQVASVSED 743 + L + + F + +G + + P ++ GD V S+ + Sbjct: 437 QILRYAKKQLTNPKNEFHLKYRQLSKSFYFEGMPIIIQSNDPMRKLFNGDIGLVVSIHSE 496 Query: 744 AMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVT---------- 793 + V P + + P ++ G + Sbjct: 497 -LRAVFPIEDRLYSFALDTLPDHEPAFFLTIHKSQGSEYKSILLYLPPMNVLDVDSENNL 555 Query: 794 QMAMDNATLNGLARSGRDVRLY 815 + + R+ V L Sbjct: 556 SILNRRILYTAITRAKERVILL 577 >UniRef50_A6W0A8 Exodeoxyribonuclease V, alpha subunit n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W0A8_MARMS Length = 639 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 91/676 (13%), Positives = 189/676 (27%), Gaps = 107/676 (15%) Query: 825 EKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKL---A 881 + AR + + I+ A + H AL + H+ + + Sbjct: 32 DWQARGVLRAIDCQWIEQLAHHAKEDHLAVHIAGALCSAYLGGGHICIDLESIWNRPPEG 91 Query: 882 FSMVDLLTEAKSF-AAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAE 940 + +L S + + + G + + L ++ E Sbjct: 92 IELEELRAVLASCKINNAADWCAVLQDSRLVSSAGKVNERPMVLAGT--RLYLYRYFQYE 149 Query: 941 KSILRHILEGKEAVMPLMERVPGELMEKLTS-------GQRAATRMILETSDRFTVVQGY 993 + +L ++ G+ +V P V L+ +L Q+ A F+V+ G Sbjct: 150 QQVLNYLK-GQFSVAPFA--VDAGLLMQLFPTQSEEVDWQKVAVANAASLP--FSVISGG 204 Query: 994 AGVGKTTQFRAVMSAVNMLPESERP--RVVGLGPTHRAVGEMRSAG-------------- 1037 G GKTT +++ + +E R+ PT +A + + Sbjct: 205 PGTGKTTTVTRLLALLVAQSLAEGKLLRIELAAPTGKAAARLTESISKAKADLPLSDDVK 264 Query: 1038 ----VDAQTLASFLHDT--QLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGG 1091 A TL L + + + + + LLDE SMV MA+ Sbjct: 265 FAIPEQASTLHRLLGSEFGRSRFKHNKDNPLHLDVLLLDEVSMVDLPMMAKLID-AMQPN 323 Query: 1092 GRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERA 1151 GR + GD DQL ++ G ++E+ Q Sbjct: 324 GRLILLGDKDQLASVEAGSVLGDL-------SYGIEEVYFQPEWAERLSQLTGEHLAPFG 376 Query: 1152 LSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEA 1211 S ++ S ++S LA+A + + ++ Sbjct: 377 NSSAPAISR-------ALTLLRTSYRFDANSGIGHLAKAMNAGNSQ------AVLRCLQS 423 Query: 1212 IVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRD 1271 D R PE + + L + + N+ Sbjct: 424 NYADVEWRAPEEGQTKADIATLAKGYDEYWEAVRQ---------------------NLDI 462 Query: 1272 GELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTL 1331 +L + + Y + + + + + +A+ Sbjct: 463 AKLYSVFS-------------RYQILTAVRQGEFGVEKVNAQLEHYFYQRGR-------- 501 Query: 1332 YTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAE 1391 D G + T++D G + + + Q Sbjct: 502 -VKDPHVWYPGKAVMLTRNDAALGLFNGDIGLCMPDEFQRLRVWFMQPDGSFTGLLPSRL 560 Query: 1392 QHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQ 1451 ++ +A+T H +QG+ L + E Y ++R K+ ++ + Sbjct: 561 SEFEVVFAMTVHKSQGSEFDQVALLLP--MAPSPVLTKELLYTGITRAKKMFILW-GSSG 617 Query: 1452 GWTDAINNAVQKGTAH 1467 A ++ +Q+ + Sbjct: 618 LIRSATSSRIQRDSGL 633 Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats. Identities = 74/637 (11%), Positives = 164/637 (25%), Gaps = 92/637 (14%) Query: 255 DVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGP 314 D T + +++W D + A Sbjct: 11 DFLNEKTLEENFPTATSFSLSDWQARGVLRAIDCQWIEQLA---------HHAKEDHLAV 61 Query: 315 DVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGID-----------E 363 + A+ A L + + R PPE +E RA + Sbjct: 62 HIAGALCSA--YLGGGHICIDLESIWNR-----PPEGIELEELRAVLASCKINNAADWCA 114 Query: 364 AISREQLI---------PLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVP 414 + +L+ P+ + E V + V + Sbjct: 115 VLQDSRLVSSAGKVNERPMVLAGTRLYLYRYFQYEQQVLNYLKGQFSVAPFAVDAGLLMQ 174 Query: 415 RTAGYSD-------AVSVLAQDRPSLA-IVSGQGGAAGQRERVAELVMMAREQGR--EVQ 464 S+ AV+ A S+ G G +A LV + +G+ ++ Sbjct: 175 LFPTQSEEVDWQKVAVANAASLPFSVISGGPGTGKTTTVTRLLALLVAQSLAEGKLLRIE 234 Query: 465 IIAADRRSQMNMKQDER-----------------LSGELITGRRQL-LEGMAFTPG---- 502 + A ++ + + + F Sbjct: 235 LAAPTGKAAARLTESISKAKADLPLSDDVKFAIPEQASTLHRLLGSEFGRSRFKHNKDNP 294 Query: 503 ---STVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR--TGTGSALMAMKDAGVNT 557 +++D+ + L L+D + +L+ D Q GS L + G+ Sbjct: 295 LHLDVLLLDEVSMVDLPMMAKLIDAMQPNGRLILLGDKDQLASVEAGSVLGDL-SYGIEE 353 Query: 558 YRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGV---REQAILTQAI 614 +Q + ++ A + ++ S + + Sbjct: 354 VYFQPEWAERLSQLTGEHLAPFGNSSAPAISRALTLLRTSYRFDANSGIGHLAKAMNAGN 413 Query: 615 RSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRV 674 + +V A + L Y E W ++ D + V Sbjct: 414 SQAVLRCLQSNYADVEWRAPEEGQTKADIATLAKGYD-----EYWEAVRQNLDIAKLYSV 468 Query: 675 TAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMP----VADGERLRVTGKIPGLRVS 730 ++ LT QGE V ++++ + ++ ++ G+ + +T L + Sbjct: 469 FSRYQILTAV-RQGEFGVEKVNAQLEHYF-YQRGRVKDPHVWYPGKAVMLTRNDAALGLF 526 Query: 731 GGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVF- 789 GD + V + + + + S + ++ Sbjct: 527 NGDIGLCMPDEFQRLRVWFM-QPDGSFTGLLPSRLSEFEVVFAMTVHKSQGSEFDQVALL 585 Query: 790 --ASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTA 824 + + + G+ R+ + L+ S R+A Sbjct: 586 LPMAPSPVLTKELLYTGITRAKKMFILWGSSGLIRSA 622 >UniRef50_Q21BL3 Putative ATP-dependent exoDNAse (Exonuclease V) alpha subunit n=1 Tax=Rhodopseudomonas palustris BisB18 RepID=Q21BL3_RHOPB Length = 379 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 106/371 (28%), Positives = 153/371 (41%), Gaps = 24/371 (6%) Query: 3 SIAQVRSAGSAGNYYT--DKDNYYV-LGSMGERWAGRGAEQLGLQGSVDKDVFTRLLEGR 59 SI+ +A SA YY +D+YY G RWAGRGAE+L L V + F L+G Sbjct: 4 SISARGNAASALRYYAHLQRDDYYSREGEPPGRWAGRGAERLSLVEPVTQGEFDAALQGV 63 Query: 60 LPDGADLSRMQDGSNR-HRPGYDLTFSAPKSVSMMAMLGGD---KRLIDAHNQAVDFAVR 115 P + G R H G+D+TFSAPKSVS++ L + + H AV A Sbjct: 64 DPKTGERLAQIGGRGREHSAGWDMTFSAPKSVSVLWALSDAHDREGIEQGHRSAVLAATA 123 Query: 116 QVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVT-QHNGEWKT 174 ++EA A G + T L+MA F+H TSR+ +PQLHTHA + N+ + +G W Sbjct: 124 RLEATAGWARRGRGGATRERTAGLLMAQFDHHTSRESDPQLHTHAFIFNLAPRRDGSWGA 183 Query: 175 LSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVE-- 232 + S +Y Q G YR+ L ++E G E + + +P + Sbjct: 184 ILS---------RELYKAQKHAGATYRQALASELERRGIRLERQ--KDTFRVAAIPRDVE 232 Query: 233 -AFSGRSQTIREAVGEDA--SLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIR 289 AFS R Q I EA + K ++A L TR+ KQ + W K GF++ Sbjct: 233 RAFSKRRQAIEEAARIHGYSTPKGMELATLRTRRPKQDARLGDLIKHWQAEAKALGFELD 292 Query: 290 AYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPP 349 R A D + + A A + + A +G Sbjct: 293 QDRQHTRAMATSSARPLRALLADLSNAASPIQSAAAPTAVAAAAASTDQQRAAQLGSRLG 352 Query: 350 ENGVIERARAG 360 + A Sbjct: 353 QAIRALDQPAA 363 >UniRef50_Q6N7J7 Possible Viral (Superfamily 1) RNA helicase n=1 Tax=Rhodopseudomonas palustris RepID=Q6N7J7_RHOPA Length = 1253 Score = 224 bits (570), Expect = 3e-56, Method: Composition-based stats. Identities = 141/826 (17%), Positives = 243/826 (29%), Gaps = 97/826 (11%) Query: 812 VRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLA 871 R D R L T ++ + RA + + + P + A Sbjct: 470 DRGVFPADVIREIAPLPAQARMTDGIDKRRVRALISDMLEHAVQNEGHTLLPRSWIVSRA 529 Query: 872 LPVVESKKLAFSMV--DLLTE--AKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYG 927 + D++ + A + T EL ++ + V K G Sbjct: 530 TGAPLDPRCVVDEDVIDMVADYLALTLETARTSDDELALKLRRYGASRTAITSAVHKRVG 589 Query: 928 TGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRF 987 SI+ +AV+P ME P +E+L +++ L RF Sbjct: 590 GKR----------HSIVHKWRALVDAVLPPMEAGPEAEVEELARREKSGALEQLACG-RF 638 Query: 988 TVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGV---DAQTLA 1044 +V+ G AG GKTT + + LPE ++ L PT +A + A + QTLA Sbjct: 639 SVLIGPAGSGKTTLLK----VLCDLPEISSGGILLLAPTGKARVRLEEATKRLGEGQTLA 694 Query: 1045 SFLHDTQLQQ----RSGETPDFSNTL----FLLDESSMVGNTDMARAYALIAAGGGRAVA 1096 FL + R P ++DE SM+ ++ I R + Sbjct: 695 QFLQRYERYDGASGRYFRNPKAPREKGYRSVIVDECSMLTEDQLSALIDAIEGVD-RLIL 753 Query: 1097 SGDTDQLQAIAPGQPFRLQQTRSAAD------------VAIMKEIVRQTPELREAVYSLI 1144 GD QL I G+PF + A A + I RQ R V L Sbjct: 754 VGDPRQLPPIGAGRPFVDICRKLAPSEETPQFPKVAPGYAELTIIGRQRGTDRGDV-LLA 812 Query: 1145 NRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDV 1204 + L + + + R + E +L + + + + Sbjct: 813 RQFSGEPLDA-GADEVWEALRSGTLSHVRTAHWALPSDLEPRLTDEIVRGLALADRSDQR 871 Query: 1205 PMTL------YEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQ 1258 L +E V + R + H + S + AG G E Sbjct: 872 GFELSIGGSEWEGHVLFWERRADQREGGAAEAAHD----WQILSPVR-----AGAPGVEA 922 Query: 1259 VMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRL 1318 + + + + E + GI D +I L++ Sbjct: 923 INLAIQRRFRNKVRERALTPNAKY---------PKPAGPQGILWGDKVINLRNNGRRRT- 972 Query: 1319 ISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQ 1378 + I + G R R R V S V + Sbjct: 973 -----YPRQEKPYVANGDIGIVVGGYKRGKMKFRPRDL------EVEFASQPGVKFTYYA 1021 Query: 1379 QTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSR 1438 E+ ++LAYA+T H QG+ + E Y AL+R Sbjct: 1022 GE----FSGEEGTPELELAYALTIHKTQGSQFERTFVVLP---RHCRPLSRELLYTALTR 1074 Query: 1439 MKQHVQVYTDNRQGWTDAINNAVQKGTA---HDVFE-PKPDREVMNAERLFSTARELRDV 1494 ++ + + ++ G ++ A D+F+ P P + F L Sbjct: 1075 HQEELNLLHEDDIGALRRYSDPSASEIARRMTDLFDAPGPVEVKTVSGPRFLDKHLLHRT 1134 Query: 1495 AAGRAVLRQAGLAGGD-SPARFIAPGRKYPQPY---VALPAFDRNGKSAGIWLNPLTTDD 1550 + G V ++ LA + I + P P F + +GI Sbjct: 1135 SRGEFVRSKSELAIAEKLNGMGIGYVYEQPLQLDGKTRWPDFTITDEDSGITYYWEHLGM 1194 Query: 1551 GNGLRGFSGEG-RVKGSGDAQFVALQGSRNGESLLADNMQDGVRIA 1595 + + + + A + +G+ L+ GV + Sbjct: 1195 LSDPQYAARWQIKRSAYLAAGIRPIGEQADGDVLIETREDAGVGLD 1240 Score = 155 bits (390), Expect = 2e-35, Method: Composition-based stats. Identities = 105/856 (12%), Positives = 229/856 (26%), Gaps = 106/856 (12%) Query: 207 QVEALGYETEVVGK-HGMWEMPGVPVEAFSGRSQTIREAVGEDASLKSRDVAALDTRKSK 265 Q E LG+ + K + + ++ + S + +A+ R V T + Sbjct: 387 QAEKLGFGSTYRDKWKSLAPLRRQLLDLVARCSLSADQALRAY-QPSQRGVFTEPTSDAD 445 Query: 266 QHVDPEIKMAEWMQTLKETGFDIRAY----RDAADQRADLRTLTPGPASQDGPDVQQAVT 321 +P + + F + D + A L D V+ ++ Sbjct: 446 LLANPYLLYERDETAAQRIAFGVVDRGVFPADVIREIAPLPAQARMTDGIDKRRVRALIS 505 Query: 322 QAIAGLSE--RKVQFTYTDVLARTVGILPPENGVIER----------ARAGIDEAISREQ 369 + + + +++R G V++ A S ++ Sbjct: 506 DMLEHAVQNEGHTLLPRSWIVSRATGAPLDPRCVVDEDVIDMVADYLALTLETARTSDDE 565 Query: 370 LIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVH---------PEKSVPRTAGYS 420 L R G + I V I+ + R V PE V A Sbjct: 566 LALKLRRYGASRTAITSAVHKRVGGKRHSIVHKWRALVDAVLPPMEAGPEAEVEELARRE 625 Query: 421 DAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDE 480 + ++ +++ G G +G+ + L + + ++A ++++ +++ Sbjct: 626 KSGALEQLACGRFSVLIGPAG-SGKTTLLKVLCDLPEISSGGILLLAPTGKARVRLEEAT 684 Query: 481 RL--SGELITGRRQLLEGMA--------------FTPGSTVIVDQGEKLSLKETLTLLDG 524 + G+ + Q E +VIVD+ L+ + L+D Sbjct: 685 KRLGEGQTLAQFLQRYERYDGASGRYFRNPKAPREKGYRSVIVDECSMLTEDQLSALIDA 744 Query: 525 AARHNVQVLITDSGQR--TGTGSALMAMKD------------------AGVNTYRWQGGE 564 + +L+ D Q G G + + A + Q G Sbjct: 745 IEGVDRLILVGDPRQLPPIGAGRPFVDICRKLAPSEETPQFPKVAPGYAELTIIGRQRGT 804 Query: 565 QRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVR----EQAILTQAIRSELKT 620 R +++ A + ++++G S + + + LT I L Sbjct: 805 DRGDVLLARQFSGEPLDAGADEVWEALRSGTLSHVRTAHWALPSDLEPRLTDEIVRGLAL 864 Query: 621 QGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHS 680 ++ W + R + + + + ++ + Sbjct: 865 ADRSDQRGFELSIGGSEWEGHVLFWERRADQREGGAAEAAHDWQILSPVRAGAPGVEAIN 924 Query: 681 LTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLR---------VSG 731 L ++ R + ++ + + G+++ R V+ Sbjct: 925 LAIQRRFRNKVRERALTPNAKYPK-PAGPQGILWGDKVINLRNNGRRRTYPRQEKPYVAN 983 Query: 732 GDRLQVASVSEDAMTVVVPGRAEPA-------------TLPVSDSPFTALKLENG--WVE 776 GD V + P E + L+L + Sbjct: 984 GDIGIVVGGYKRGKMKFRPRDLEVEFASQPGVKFTYYAGEFSGEEGTPELELAYALTIHK 1043 Query: 777 TPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVV 836 T G + V + L R ++ L D S Sbjct: 1044 TQGSQFERTFVVLPRHCRPLSRELLYTALTRHQEELNLLHEDDIGALRRYSDPSASEIAR 1103 Query: 837 SEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAA 896 A +S + L + S +L K Sbjct: 1104 RMTDLFDAPGPVEVKTVSGP--------RFLDKHLLHRTSRGEFVRSKSELAIAEKLNGM 1155 Query: 897 EGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGL----LVSRASYEAEKSILRHILEGKE 952 E +++ + + D D G ++S Y A I R Sbjct: 1156 GIGYVYEQPLQLDGKTRWPDFTITDEDSGITYYWEHLGMLSDPQYAARWQIKRSAY-LAA 1214 Query: 953 AVMPLMERVPGELMEK 968 + P+ E+ G+++ + Sbjct: 1215 GIRPIGEQADGDVLIE 1230 >UniRef50_Q44349 Conjugal transfer protein traA n=12 Tax=Rhizobiales RepID=TRAA_AGRT5 Length = 1100 Score = 224 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 145/862 (16%), Positives = 262/862 (30%), Gaps = 167/862 (19%) Query: 871 ALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTG- 929 L ++ +K F D+ + + F +L I + L + G Sbjct: 277 VLDLIMREKSVFDERDVAKVLHRYVDDPAVFQQLMLRIILNPEVLRLQRDTIEFATGEKV 336 Query: 930 --LLVSRASYEAEKSILRHI--LEGKEAVMPLMERVPGELME--KLTSGQRAATRMILET 983 +RA E ++ R L KE + +L+ Q+AA I Sbjct: 337 PARYSTRAMIRLEATMARQAMWLSDKETHAVSTAVLAATFGRHGRLSEEQKAAIECI-AG 395 Query: 984 SDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM-RSAGVDAQT 1042 R V G AG GKTT +A A E RVVG +A + + AG++++T Sbjct: 396 PARIAAVVGRAGAGKTTMMKAAREA----WELAGYRVVGGALAGKASEGLDKEAGIESRT 451 Query: 1043 LASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQ 1102 L+S+ +L+ G + T+F++DE+ MV + MA + G + V GD +Q Sbjct: 452 LSSW----ELRWNRGRDVLDNKTVFVMDEAGMVASKQMAGFVDAVVRAGAKIVLVGDPEQ 507 Query: 1103 LQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPEL-REAVYSLINRDVERALSGLESVKPS 1161 LQ I G FR R A ++ I RQ + R+A L +VE+AL+ + Sbjct: 508 LQPIEAGAAFRAIVDR--IGYAELETIYRQREDWMRKASLDLARGNVEKALALYNANARI 565 Query: 1162 QVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTP 1221 R + E ++ D+ R Sbjct: 566 VGERLK--------------------------------------AEAVERLIADW-NRDY 586 Query: 1222 EAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWE 1281 + + TLI+ HL D R+LN M + + G +G+ V G+ + Sbjct: 587 DQTKTTLILAHLRRDVRMLNVMAREKLVERGIVGEGHVFRTADGERRFHAGDQIV---FL 643 Query: 1282 THRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGT 1341 + L + + + + + + + D + + + Sbjct: 644 KNETLLGVKNGMIGHVVEAVPNRIVAVVGDRDHRRHV--------------VVEQRFYSN 689 Query: 1342 GDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAIT 1401 D T+ G +V R ++H+ A+T Sbjct: 690 LDH--------------GYATTIHKSQGATV-------DRVKVLASLSLDRHLTYV-AMT 727 Query: 1402 AHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNR-----QGWTDA 1456 R ++ +Q+Y R G Sbjct: 728 ------------------------------------RHREDLQLYYGCRSFAFNGGLAKV 751 Query: 1457 INNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLR-------QAGLAGG 1509 ++ K T D K RE + F+ R L + R +LR + Sbjct: 752 LSRKNAKETTLDYERGKLYREAL----RFAENRGLHIMQVARTMLRDRLDWTLRQKTKVS 807 Query: 1510 DSPARF--------IAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGEG 1561 D R + K A P +G + G+ L Sbjct: 808 DLVHRLRALGERLGLDQSPKTQTMKEAAPMVTGIKTFSG----SVADTVGDKLGADPTLK 863 Query: 1562 RVKGSGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPGAITG 1621 + A+F + + E+ D V ++ + + A TG Sbjct: 864 QQWEEVSARFRYV--FADPETAFRAVNFDTVLADKEAAKAVLQKLEAEPASIGALKGKTG 921 Query: 1622 GRVWGDIPDNSVQPGAGNGEPVTAEVLAQRQAEEAIRRETERRADEIVRKMAENKPDLPD 1681 + + + N + ++ + E + ++++ + P L Sbjct: 922 -ILASKTEREARRVAEVNVPALKRDLEQYLRMRETATLRIVTEEQALRQRVSIDIPALSP 980 Query: 1682 GKT--EQAVREIAGQERDRAAI 1701 + VR+ + AA+ Sbjct: 981 AARVVLERVRDAIDRNDLPAAL 1002 Score = 165 bits (417), Expect = 2e-38, Method: Composition-based stats. Identities = 69/564 (12%), Positives = 161/564 (28%), Gaps = 86/564 (15%) Query: 282 KETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLA 341 +A + + L S++ + + + + K F DV A Sbjct: 236 GAKAISRKAEQQGVRPELERIELNEERRSENTRRILKNPAIVLDLIMREKSVFDERDV-A 294 Query: 342 RTVGILPPENGVIERARAGIDEAISREQLIPLDREK----------GLFTSGIHVLDELS 391 + + + V ++ I I +++ L R+ +++ + E + Sbjct: 295 KVLHRYVDDPAVFQQLMLRI---ILNPEVLRLQRDTIEFATGEKVPARYSTRAMIRLEAT 351 Query: 392 VRALSRDIMKQNRVTVHPE-------KSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAG 444 + + + + V + + A+ +A +A V G+ G AG Sbjct: 352 MARQAMWLSDKETHAVSTAVLAATFGRHGRLSEEQKAAIECIA-GPARIAAVVGRAG-AG 409 Query: 445 QRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGR--RQLLEGMAFTPG 502 + + G V A ++ + ++ + ++ R Sbjct: 410 KTTMMKAAREAWELAGYRVVGGALAGKASEGLDKEAGIESRTLSSWELRWNRGRDVLDNK 469 Query: 503 STVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSG---QRTGTGSALMAMKD----AGV 555 + ++D+ ++ K+ +D R ++++ Q G+A A+ D A + Sbjct: 470 TVFVMDEAGMVASKQMAGFVDAVVRAGAKIVLVGDPEQLQPIEAGAAFRAIVDRIGYAEL 529 Query: 556 NTYRWQGGEQRPAT---------------------IISEPDRNVRYARLAGDFAASVKAG 594 T Q + I+ E + RL D+ Sbjct: 530 ETIYRQREDWMRKASLDLARGNVEKALALYNANARIVGERLKAEAVERLIADWNRDYDQT 589 Query: 595 EESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGM 654 + ++ R+ +L R +L +G++G V TA R + Sbjct: 590 KTTLILAHLRRDVRMLNVMAREKLVERGIVGEGHVFRTA-------DGERRFHAGDQIVF 642 Query: 655 VMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVAD 714 + + ++ + + D VV S+ + + Sbjct: 643 LKNETLLGVKNGMIGHVVEAVPNRIVAVVGDRDHRRHVVVEQRFYSNLDHGYATTIHKSQ 702 Query: 715 G---ERLRV---------------TGKIPGLRV--------SGGDRLQVASVSEDAMTVV 748 G +R++V T L++ G +V S T + Sbjct: 703 GATVDRVKVLASLSLDRHLTYVAMTRHREDLQLYYGCRSFAFNGGLAKVLSRKNAKETTL 762 Query: 749 VPGRAEPATLPVSDSPFTALKLEN 772 R + + + L + Sbjct: 763 DYERGKLYREALRFAENRGLHIMQ 786 >UniRef50_Q314D9 ATP-dependent DNA helicase, RecD/TraA family n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q314D9_DESDG Length = 740 Score = 223 bits (568), Expect = 4e-56, Method: Composition-based stats. Identities = 100/811 (12%), Positives = 211/811 (26%), Gaps = 163/811 (20%) Query: 646 LRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLF 705 +P +++ W + ++ +D + + +G + Sbjct: 45 FARENQPVVLLGTWATHPKYGRQFKVDAMEHDLD----LNPEGLIHYLANHPDIKGIGPA 100 Query: 706 RPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPF 765 + + G+ T ++ R +S DA + + ++ + Sbjct: 101 KARLIVEEFGDSFEETLIESPELIASKAR-----ISLDAANRLKDEWCKNRSVNAVLAWL 155 Query: 766 TALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAE 825 +A L + V T + + + R + + A Sbjct: 156 SAFGLTHHQVTTLVDKLGGNCLEILKADPYILIREL-----------RGFGFKKVDKIAR 204 Query: 826 KLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMV 885 KL T +L+ Sbjct: 205 KLGTPKDHTPRIRAGIQYCMHEALDQG--------------------------NCWVEYE 238 Query: 886 DLLTEAKSFAAEGTGFTEL--GGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSI 943 DL+ +A + + ++ I + G L+ + E+ I Sbjct: 239 DLVDQANLLLVMDNLDSRIRIEASLDNLISE---RLLSCESHAGRFLVALSDILKMEQDI 295 Query: 944 LRHILEGKEAVMPL-----MERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGK 998 + + ++++ E L Q A L+ S +++ G AG GK Sbjct: 296 AAIFTKADASNPHFKSTRNLQKLILRQAETLNEKQLEAVHSALQHS--ISLISGGAGSGK 353 Query: 999 TTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRS-AGVDAQTLASFLHDTQLQQRSG 1057 + + N + E VV PT +A + +G T+ L Sbjct: 354 SYTVSVI----NAVCEECDLEVVLSAPTGKAAKRLEEVSGRTGTTIHRLLGYDGKSFSKD 409 Query: 1058 ETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQT 1117 + ++DE SMV + + + V GD +QL + PG R Sbjct: 410 SNNPIDADILIIDEFSMVDVSLAWHLFNAVDFARTAIVIVGDHNQLPPVGPGNILRDLIH 469 Query: 1118 RSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVT 1177 +A I+ ++VRQ L+E +++ +V + W T Sbjct: 470 SNAIPTVILDKVVRQAGVLKENSTAILKGEVRKTSDASTQGCRD--------WYLADQFT 521 Query: 1178 EFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDR 1237 + ++ L ++ G +++D TP + Sbjct: 522 DPGAARNFLLDLFDKRLDALGFD-----------LIKDVQVLTPTHKGPLGT-------- 562 Query: 1238 RVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRI 1297 + LN + + +K L ++ + +L R S + H + +N + + Sbjct: 563 KSLNEDLQRLIQK------------RLWNVSVPETQLGRRSPFLKHDKVIQTRNN--YDL 608 Query: 1298 AGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYV 1357 ++ G + G + AV I++ Sbjct: 609 NVMNGAIGHVVDVLPNGTLLIDFEGVAVEIEKGSPNLQDIQLA----------------- 651 Query: 1358 ANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALE 1417 T+ G + H A Sbjct: 652 --YALTIHKTQGSEFPCAVVV-----------------------VHKA------------ 674 Query: 1418 GTEGNRKLMAGFESAYVALSRMKQHVQVYTD 1448 M Y ++R ++ V D Sbjct: 675 -----HSFMHHRNLLYTGVTRARKTAIVLGD 700 Score = 189 bits (479), Expect = 8e-46, Method: Composition-based stats. Identities = 82/612 (13%), Positives = 172/612 (28%), Gaps = 74/612 (12%) Query: 270 PEIKMAEWMQTLKE-TGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLS 328 EI A+ ++E GF + A + + TP + + +A+ Q Sbjct: 177 LEILKADPYILIRELRGFGFKKVDKIARKLGTPKDHTPRIRAGIQYCMHEALDQ------ 230 Query: 329 ERKVQFTYTDVLARTVGILPPENGVIE-RARAGIDEAISREQLIPLDREKGLF--TSGIH 385 Y D++ + +L +N R A +D I E+L+ + G F Sbjct: 231 -GNCWVEYEDLVDQANLLLVMDNLDSRIRIEASLDNLI-SERLLSCESHAGRFLVALSDI 288 Query: 386 VLDELSVRALSRDIMKQNRVTVHPE--------KSVPRTAGYSDAVSVLAQDRPSLAIVS 437 + E + A+ N ++ +AV Q S++++S Sbjct: 289 LKMEQDIAAIFTKADASNPHFKSTRNLQKLILRQAETLNEKQLEAVHSALQ--HSISLIS 346 Query: 438 GQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGM 497 G G +G+ V+ + + E EV + A ++ +++ +G I +G Sbjct: 347 GGAG-SGKSYTVSVINAVCEECDLEVVLSAPTGKAAKRLEEVSGRTGTTIHRLLGY-DGK 404 Query: 498 AFTPG-------STVIVDQGEKLSLKETLTLLDGAA-RHNVQVLITDSGQR--TGTGSAL 547 +F+ +I+D+ + + L + V++ D Q G G+ L Sbjct: 405 SFSKDSNNPIDADILIIDEFSMVDVSLAWHLFNAVDFARTAIVIVGDHNQLPPVGPGNIL 464 Query: 548 MAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQ 607 + + R A ++ E + + + Sbjct: 465 RDLIHSNAIPTVILDKVVRQAGVLKENSTAILKGEV--------------------RKTS 504 Query: 608 AILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHD 667 TQ R P L ++ D+ + V+ + Sbjct: 505 DASTQGCRDWYLAD-QFTDPGAARNFLLDLFDKRLDALGFDLIKDVQVLTPTHKG----- 558 Query: 668 RYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGL 727 + L + V + S F +++ T L Sbjct: 559 PLGTKSLNEDLQRLI---QKRLWNVSVPETQLGRRSPFLKH-------DKVIQTRNNYDL 608 Query: 728 RVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDS-- 785 V G V V + T+++ + ++L Sbjct: 609 NVMNGAIGHVVDVLPNG-TLLIDFEGVAVEIEKGSPNLQDIQLAYALTIHKTQGSEFPCA 667 Query: 786 -ATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRA 844 V + + M N G+ R+ + + R K + + Sbjct: 668 VVVVHKAHSFMHHRNLLYTGVTRARKTAIVLGDRWGIRNCAKKCQVDDRKTFLSILLNNL 727 Query: 845 GETSLETAISHQ 856 ++A + Sbjct: 728 NCPEEQSACAGA 739 >UniRef50_P04993 Exodeoxyribonuclease V alpha chain n=123 Tax=Enterobacteriaceae RepID=EX5A_ECOLI Length = 608 Score = 223 bits (568), Expect = 4e-56, Method: Composition-based stats. Identities = 95/617 (15%), Positives = 179/617 (29%), Gaps = 103/617 (16%) Query: 887 LLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRH 946 LL S E + E A + RGD L + E+++ R Sbjct: 67 LLATCVSEIGELQNWEECLLASQA-VSRGD---EPTPMILCGDRLYLNRMWCNERTVARF 122 Query: 947 ILEGKEAVMPLMERVPGELMEKLTS------GQRAATRMILETSDRFTVVQGYAGVGKTT 1000 E A+ E + + ++KL Q+ A + L R +V+ G G GKTT Sbjct: 123 FNEVNHAIEVD-EALLAQTLDKLFPVSDEINWQKVAAAVALT--RRISVISGGPGTGKTT 179 Query: 1001 QFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAG------------------VDAQT 1042 +++A+ + + ER R+ PT +A + + DA T Sbjct: 180 TVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLPLTDEQKKRIPEDAST 239 Query: 1043 LASFLHDTQL--QQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDT 1100 L L + R + ++DE+SM+ M+R R + GD Sbjct: 240 LHRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMSRLID-ALPDHARVIFLGDR 298 Query: 1101 DQLQAIAPGQPFRLQQTRS--AADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESV 1158 DQL ++ G + +++ R T A + +L L+ Sbjct: 299 DQLASVEAGAVLGDICAYANAGFTAERARQLSRLTGTHVPAGTGTEAASLRDSLCLLQKS 358 Query: 1159 KPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTG 1218 G A + + + + + DY Sbjct: 359 YRFGSDSGIGQLAAAINRGDKTAVKTVFQQDF------------TDIEKRLLQSGEDYIA 406 Query: 1219 RTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLS 1278 EA L + R + +I Sbjct: 407 MLEEALAGYGRYLDLLQARAEPDLIIQA-------------------------------- 434 Query: 1279 TWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIR 1338 + ++ L + + G++ + I + P EG Sbjct: 435 -FNEYQLLCALREGPF----GVAGLNERIEQFMQQKRKIHRHPHSRWYEGR--------- 480 Query: 1339 VGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAY 1398 + ++D G + + G + I+ Q + + Sbjct: 481 -----PVMIARNDSALGLFNGDIG-IALDRGQGTRVWFAMPDGNIKSVQPSRLPEHETTW 534 Query: 1399 AITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAIN 1458 A+T H +QG+ A + R + E Y A++R ++ + +Y D R + AI Sbjct: 535 AMTVHKSQGSEFDHAALILP--SQRTPVVTRELVYTAVTRARRRLSLYADER-ILSAAIA 591 Query: 1459 NAVQKGTAHDVFEPKPD 1475 ++ + + Sbjct: 592 TRTERRSGLAALFSSRE 608 Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats. Identities = 47/488 (9%), Positives = 115/488 (23%), Gaps = 61/488 (12%) Query: 382 SGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGG 441 + +E++ + + + S A L + ++ G G Sbjct: 118 TVARFFNEVNHAIEVDEALLAQTLDKLFPVSDEINWQKVAAAVALTRRISVISGGPGTGK 177 Query: 442 AAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDER-----------------LSG 484 + +A L+ MA + +++ A ++ + + Sbjct: 178 TTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLPLTDEQKKRIPEDA 237 Query: 485 ELITGRRQLLEGMAFTPG--------STVIVDQGEKLSLKETLTLLDGAARHNVQVLITD 536 + G ++VD+ + L L+D H +V+ Sbjct: 238 STLHRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMSRLIDALPDH-ARVIFLG 296 Query: 537 SGQRTGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDR------------NVRYARLA 584 + + A + D E+ L Sbjct: 297 DRDQLASVEAGAVLGDICAYANAGFTAERARQLSRLTGTHVPAGTGTEAASLRDSLCLLQ 356 Query: 585 GDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSR 644 + +G +A ++ + + + E + ++ Sbjct: 357 KSYRFGSDSGIGQLAAAINRGDKTAVKTVFQQDF------TDIEKRLLQSGEDYIAMLEE 410 Query: 645 YLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSL 704 L R +++ R+ +I L +G V ++ + Sbjct: 411 ALAGYGRYLDLLQ-----ARAEPDLIIQAFNEY--QLLCALREGPFGVAGLNERIEQFMQ 463 Query: 705 FRPE-----KMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLP 759 + + +G + + L + GD ++ T V + Sbjct: 464 QKRKIHRHPHSRWYEGRPVMIARNDSALGLFNGDIGI--ALDRGQGTRVWFAMPDGNIKS 521 Query: 760 VSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAM---DNATLNGLARSGRDVRLYS 816 V S + +Q + R+ R + LY+ Sbjct: 522 VQPSRLPEHETTWAMTVHKSQGSEFDHAALILPSQRTPVVTRELVYTAVTRARRRLSLYA 581 Query: 817 SLDETRTA 824 A Sbjct: 582 DERILSAA 589 >UniRef50_B5EPU7 Exodeoxyribonuclease V, alpha subunit n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EPU7_ACIF5 Length = 650 Score = 223 bits (568), Expect = 5e-56, Method: Composition-based stats. Identities = 82/593 (13%), Positives = 159/593 (26%), Gaps = 102/593 (17%) Query: 921 DVAKGYGTGLLVSRASYEAEKSILRHILEGK----------EAVMPLMERVPGELMEKLT 970 + L R + ++ I + + EA+ P +E++ E Sbjct: 123 ETPLVLSAARLYLRRYWRDQQFIAEALRQRAQQRVADAANPEALRPWLEQLFPASDEPGD 182 Query: 971 --SGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHR 1028 Q+ A + L + F+++ G G GKT M A+ M S R+V PT + Sbjct: 183 ALPWQKIACALALRS--HFSIITGGPGTGKTYTAARFM-ALLMATSSTPLRIVLAAPTGK 239 Query: 1029 AVGEMRSAG-----------------------VDAQTLASFLHDTQ--LQQRSGETPDFS 1063 A + + A+TL S L + R Sbjct: 240 AAVRIDESLQSAVGTLPQLSQIPDMTAAFARLRPARTLHSLLGARPDSRRFRHDAANPLE 299 Query: 1064 NTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADV 1123 + ++DE+SM+ MA + R + GD DQL ++ G Sbjct: 300 LDVLVVDEASMIHQEMMAALLRALPPA-ARLILLGDQDQLASVEAGAVLAEL-------- 350 Query: 1124 AIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQ 1183 SL + + PR + + Sbjct: 351 ------------------SLGSGKYDAETCHYMQASCGAAPRPGDNGPSPLAANIIRLQR 392 Query: 1184 EAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSM 1243 + T A I+ + S Sbjct: 393 SHRFNAEIGALADAVHGGHPETAVRILQTAHTGTLAWQPAPAIHRILELARPE-----SA 447 Query: 1244 IHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKD 1303 V + AG+ + ++ + L + + GI++ Sbjct: 448 YGRVWQAAGQPPPKDRQQ--------HSAWVKTILNDYAGFRILCALRQGPWGVTGINRA 499 Query: 1304 DGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWT 1363 + + + + L+ + T + S+ + G Sbjct: 500 IEDYLQR------------QGILQSRGLWYAGRPTLVTRNDPNLGLSNGDIGIALPD--- 544 Query: 1364 VTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNR 1423 + + R H + A+A+T H AQG+ + + E Sbjct: 545 ----PDKRLRVYFPNSEEAPRAILPSRLNHTESAWAMTVHKAQGSEFAHTVLILPPED-- 598 Query: 1424 KLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDR 1476 + E Y A++R ++ + R+ +AI ++ + P R Sbjct: 599 SPVLSRELLYTAITRARKCFTLIA-PRERLENAIQRQTRRMSGLHAALYDPRR 650 Score = 111 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 64/565 (11%), Positives = 138/565 (24%), Gaps = 60/565 (10%) Query: 330 RKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDE 389 Q+T T +R V + V + + F + Sbjct: 94 HAAQWTETLARSRCVQVTERNAPVPANGAETPLVLSAARLYLRRYWRDQQFIAEALRQRA 153 Query: 390 LSVRALSR--DIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRE 447 A + + ++ + P P A ++ R +I++G G G+ Sbjct: 154 QQRVADAANPEALRPWLEQLFPASDEPGDALPWQKIACALALRSHFSIITGGPG-TGKTY 212 Query: 448 RVA---ELVMMAREQGREVQIIAADRRSQMNMKQDER----------------------L 482 A L+M + + A ++ + + + + Sbjct: 213 TAARFMALLMATSSTPLRIVLAAPTGKAAVRIDESLQSAVGTLPQLSQIPDMTAAFARLR 272 Query: 483 SGELITGRRQLLEGMAFTPGS--------TVIVDQGEKLSLKETLTLLDGAARHNVQVLI 534 + ++VD+ + + LL +L+ Sbjct: 273 PARTLHSLLGARPDSRRFRHDAANPLELDVLVVDEASMIHQEMMAALLRALPPAARLILL 332 Query: 535 TDSGQR--TGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVK 592 D Q G+ L + + + + + + LA + + Sbjct: 333 GDQDQLASVEAGAVLAELSLGSGKYDAETCHYMQASCGAAPRPGDNGPSPLAANIIRLQR 392 Query: 593 AGEESVAQVSGVREQAILTQAIRSELKTQ--GVLGLPEVTMTALSPVWLDSRSRYLRDMY 650 + E L A+ +L A P R L Sbjct: 393 SHRF-------NAEIGALADAVHGGHPETAVRILQTAHTGTLAWQPAPAIHRILELARPE 445 Query: 651 RPGMVM-----EQWNPETRSHDRYVIDRVTAQSH-SLTLRDAQGETQVVRISSLDSSWSL 704 + + + + H +V + + + QG V I+ + Sbjct: 446 SAYGRVWQAAGQPPPKDRQQHSAWVKTILNDYAGFRILCALRQGPWGVTGINRAIEDYLQ 505 Query: 705 FR---PEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVS 761 + + G VT P L +S GD + + V P E A + Sbjct: 506 RQGILQSRGLWYAGRPTLVTRNDPNLGLSNGDIGIALPDPDKRLRVYFPNS-EEAPRAIL 564 Query: 762 DSPFTALKLENGWVETPGHSVSDSATVF---ASVTQMAMDNATLNGLARSGRDVRLYSSL 818 S + + TV + + + R+ + L + Sbjct: 565 PSRLNHTESAWAMTVHKAQGSEFAHTVLILPPEDSPVLSRELLYTAITRARKCFTLIAPR 624 Query: 819 DETRTAEKLARHPSFTVVSEQIKTR 843 + A + + + R Sbjct: 625 ERLENAIQRQTRRMSGLHAALYDPR 649 >UniRef50_C6NU54 Exodeoxyribonuclease V alpha chain n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NU54_9GAMM Length = 654 Score = 223 bits (567), Expect = 6e-56, Method: Composition-based stats. Identities = 90/580 (15%), Positives = 162/580 (27%), Gaps = 98/580 (16%) Query: 921 DVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTS--------G 972 + + L R + E I R + + L G Sbjct: 129 ETPLVWDGRRLYLRRHFRDEWEIDRQLQSRVGTTVAYFSEGSATLTRLFGPASSSSAGDG 188 Query: 973 QRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGE 1032 QR A L FT++ G G GKT + + +L ++ RV PT +A Sbjct: 189 QRLAC--ALAAERGFTLITGGPGSGKTYT---IARLLVLLMQAAPRRVALAAPTGKAALR 243 Query: 1033 MRSAGV----------------------DAQTLASFLHDTQL--QQRSGETPDFSNTLFL 1068 M +A AQTL L + R + L + Sbjct: 244 MDTALRQSVDDFVRRGDDDLADLLRQVPPAQTLHRLLGARPGTRRLRHDAHRPLNFDLLV 303 Query: 1069 LDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKE 1128 +DE+SM+ + MA + + GD DQL ++ G + E Sbjct: 304 VDEASMIQHDLMAALLR-ATPARSQLILLGDPDQLASVEAGAV--------------LAE 348 Query: 1129 IVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLA 1188 I R A + R AL+ +S++ +E S AKLA Sbjct: 349 ICRGRAVYSPATAEDLKRRWGIALAA-DSLRDDASALEEAVVRLSSSYRF--DGPIAKLA 405 Query: 1189 EAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVR 1248 A + + T E + A + +R ++ + Sbjct: 406 TAIRSGDAECVIDLLAASTTVEGSALGWIDPRAGAGRANFLELA---ERTWRSTQARLEQ 462 Query: 1249 EKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLIT 1308 +GE + + R+ + +AGI+ Sbjct: 463 VPSGE-----TEHATWVRELLAAADTFRIL---------CALREGPWGVAGIN------- 501 Query: 1309 LQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVS 1368 A + G + ++D G + V + Sbjct: 502 ---------------AQMAAQLRPPGYSGDWYPGRPVLVQRNDPIAGVYNGDLGLVLPDT 546 Query: 1369 GDSVTLSDGQQTREIRP-GQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMA 1427 + + + + Q AYA+T H AQG+ + + E + Sbjct: 547 QGRLQVYFPRGPQLAPLRLHPQRLGDATSAYALTVHKAQGSEFQRVLLILPPED--SPVL 604 Query: 1428 GFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAH 1467 E Y A++R ++ T + + + ++ + Sbjct: 605 SRELLYTAVTRARREFIAVT-PLETLSRILGRHGRRMSGL 643 Score = 121 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 63/534 (11%), Positives = 135/534 (25%), Gaps = 57/534 (10%) Query: 366 SREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVH-----------PEKSVP 414 R PL + H DE + + + P S Sbjct: 125 QRGPETPLVWDGRRLYLRRHFRDEWEIDRQLQSRVGTTVAYFSEGSATLTRLFGPASSSS 184 Query: 415 RTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQM 474 G A ++ A+ +++G G+ LV++ + R V + A ++ + Sbjct: 185 AGDGQRLACALAAE--RGFTLITGGPGSGKTYTIARLLVLLMQAAPRRVALAAPTGKAAL 242 Query: 475 NMKQDERL---------------------SGELITGRRQLLEGMAFTPGS--------TV 505 M R + + G + Sbjct: 243 RMDTALRQSVDDFVRRGDDDLADLLRQVPPAQTLHRLLGARPGTRRLRHDAHRPLNFDLL 302 Query: 506 IVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR--TGTGSALMAMKDAGVNTYRWQGG 563 +VD+ + LL + +L+ D Q G+ L + Sbjct: 303 VVDEASMIQHDLMAALLRATPARSQLILLGDPDQLASVEAGAVLAEICRGRAVYSPATAE 362 Query: 564 EQRPATIISEPDRNVRYARLAGDFAA-------SVKAGEESVAQVSGVREQAILTQAIRS 616 + + I+ ++R A + A +A + + + + Sbjct: 363 DLKRRWGIALAADSLRDDASALEEAVVRLSSSYRFDGPIAKLATAIRSGDAECVIDLLAA 422 Query: 617 ELKTQG-VLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVT 675 +G LG + A +L+ R R + E + R ++ Sbjct: 423 STTVEGSALGWIDPRAGAGRANFLELAERTWRSTQARLEQVPSGETEHATWVRELLAA-- 480 Query: 676 AQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRL 735 A + + +G V I++ ++ G + V P V GD Sbjct: 481 ADTFRILCALREGPWGVAGINAQMAAQLRPPGYSGDWYPGRPVLVQRNDPIAGVYNGDLG 540 Query: 736 QVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVF---ASV 792 V ++ + V P + A L + + Sbjct: 541 LVLPDTQGRLQVYFPRGPQLAPLRLHPQRLGDATSAYALTVHKAQGSEFQRVLLILPPED 600 Query: 793 TQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGE 846 + + + R+ R+ + L+ + + +G Sbjct: 601 SPVLSRELLYTAVTRARREFIAVTPLETLSRILGRHGRRMSGLATRLFPEVSGH 654 >UniRef50_D1T987 Exodeoxyribonuclease V, alpha subunit n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1T987_9BURK Length = 696 Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats. Identities = 95/586 (16%), Positives = 164/586 (27%), Gaps = 46/586 (7%) Query: 926 YGTGLLVSRASYEAEKSILRHILEGK----EAVMPLMERVPGELMEKL-----------T 970 G L Y+ E+ + ++ + P L E+L Sbjct: 122 DAQGRLYLARYYDYERRLAHALVAQATADGSTANVDADTAPAALRERLLRYFGPPRDDEV 181 Query: 971 SGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAV 1030 QR A M L R T+V G G GKTT V++ + R+ PT +A Sbjct: 182 DWQRVAAVMALSG--RLTIVSGGPGTGKTTTVVGVLACLLDARAD--LRIALAAPTGKAA 237 Query: 1031 GEMRSAGV----------------DAQTLASFLHDTQL-QQRSGETPDFSNTLFLLDESS 1073 M+ A + + TL L + R + ++DE+S Sbjct: 238 QRMQEALLARAGELPAELAERLPQTSYTLHRLLGSGPGGRFRHHRDNPLPYDVVVIDEAS 297 Query: 1074 MVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQT 1133 M+ I R V GD DQL A+ G F R A + + R Sbjct: 298 MIDVAMATHLLDAIG-AQTRLVMLGDKDQLAAVEAGAVFAELSARPALSASGL---RRVA 353 Query: 1134 PELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQK 1193 L L + G E+ E E + + A A +Q Sbjct: 354 QALDINEARLARALPRASRQGDEAPSDDFFVPPEALQTFEADASGDLFAGVATAAGDEQP 413 Query: 1194 AMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGE 1253 A P+ + E+ L V N ++ + Sbjct: 414 DRDARSANEHNPLADCVVWLERNYRFGLESPIGRLSVAIRNGSPSAALDVLRTDPTEVCA 473 Query: 1254 LGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAE 1313 + L + + L + ++ Sbjct: 474 AALHEDAHTTLTERTMTRLAAGFAPYADALAATLASDTPDPLPLFDALNRFRILCATRLG 533 Query: 1314 GNTRLI---SPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGD 1370 + V + + G + T++D G + +G Sbjct: 534 PRGVDQVNAAIAAQVRRAAGVTLAVGAQWFAGRPVMVTRNDYALGLFNGDIGIALPGAGG 593 Query: 1371 SVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFE 1430 ++ + +R A D A+A+T H +QG+ A+ + + E Sbjct: 594 ALRVYFRTGDGGVRAVSPAALPPHDTAFALTVHKSQGSEFEHAVLVLP--SAFSRVLSRE 651 Query: 1431 SAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDR 1476 Y A++R ++ V+V R AI Q+ + + R Sbjct: 652 LVYTAITRARERVEVI-GARAVLAQAIATPTQRDSGLAARIAEASR 696 Score = 80.8 bits (197), Expect = 5e-13, Method: Composition-based stats. Identities = 71/646 (10%), Positives = 146/646 (22%), Gaps = 113/646 (17%) Query: 290 AYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLART------ 343 A + +R + G +++ + A +E V + R Sbjct: 33 ALAEGFARRIGMLARRGGASTEVVKWAARGAFAASRATAEGHVCVPLAALARRFDASSAE 92 Query: 344 VGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQN 403 V +G+ A A + L+ + + L+ +++ + Sbjct: 93 VRAALLASGMASDGAADTAGAAALRPLVIDAQGRLYLARYYDYERRLAHALVAQATADGS 152 Query: 404 RVTVHPEKSVPRTAGYS--------------DAVSVLAQDRPSLAIVSGQGGAAGQRERV 449 V + + V+ + L IVSG G V Sbjct: 153 TANVDADTAPAALRERLLRYFGPPRDDEVDWQRVAAVMALSGRLTIVSGGPGTGKTTTVV 212 Query: 450 AELVMMARE-QGREVQIIAADRRSQMNMKQDERLSG---------------ELITGRRQL 493 L + + + A ++ M++ + Sbjct: 213 GVLACLLDARADLRIALAAPTGKAAQRMQEALLARAGELPAELAERLPQTSYTLHRLLGS 272 Query: 494 LEGMAFT-------PGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR--TGTG 544 G F P V++D+ + + LLD V++ D Q G Sbjct: 273 GPGGRFRHHRDNPLPYDVVVIDEASMIDVAMATHLLDAIGAQTRLVMLGDKDQLAAVEAG 332 Query: 545 SALM------AMKDAGVNTYRW-QGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEES 597 + A+ +G+ + + DF +A + Sbjct: 333 AVFAELSARPALSASGLRRVAQALDINEARLARALPRASRQGDEAPSDDFFVPPEALQTF 392 Query: 598 VAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSR--------YLRDM 649 A SG + T A E + E A VWL+ R L Sbjct: 393 EADASGDLFAGVATAA-GDEQPDRDARSANEHNPLADCVVWLERNYRFGLESPIGRLSVA 451 Query: 650 YRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVV---------------- 693 R G + + +H+ Sbjct: 452 IRNGSPSAALDVLRTDPTEVCAAALHEDAHTTLTERTMTRLAAGFAPYADALAATLASDT 511 Query: 694 ----RISSLDSSWSLFRPEKMPVADGER----------------------------LRVT 721 + + + + ++ ++ + VT Sbjct: 512 PDPLPLFDALNRFRILCATRLGPRGVDQVNAAIAAQVRRAAGVTLAVGAQWFAGRPVMVT 571 Query: 722 GKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHS 781 L + GD +A V + VS + Sbjct: 572 RNDYALGLFNGDIG-IALPGAGGALRVYFRTGDGGVRAVSPAALPPHDTAFALTVHKSQG 630 Query: 782 VSDSATVFA---SVTQMAMDNATLNGLARSGRDVRLYSSLDETRTA 824 V + +++ + R+ V + + A Sbjct: 631 SEFEHAVLVLPSAFSRVLSRELVYTAITRARERVEVIGARAVLAQA 676 >UniRef50_D0LWH5 Exodeoxyribonuclease V n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LWH5_HALO1 Length = 749 Score = 222 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 98/537 (18%), Positives = 155/537 (28%), Gaps = 90/537 (16%) Query: 969 LTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHR 1028 L+ Q AA R T RF V+ G G GKT ++ + L ES + PT + Sbjct: 264 LSDEQAAAVRAA--TRQRFCVISGGPGTGKTAIVVTILRTLARLGESPE-SALLAAPTGK 320 Query: 1029 AVGEMRSAGVDA---------------------QTLASFLHDTQ--LQQRSGETPDFSNT 1065 A M S+ A QTL L + R E Sbjct: 321 AANRMGSSIRSALLAVPDPDPVDRQLLERASEPQTLHRLLGYVPVLDRFRQHENNPLRAR 380 Query: 1066 LFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAI 1125 ++DE+SM+ M R + R V GD DQL ++ G R D Sbjct: 381 TVIVDEASMIDAELMERLLRAV-PSETRLVLLGDADQLPSVDAGAVLRDLVAAGTGDDGG 439 Query: 1126 MKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEA 1185 R T R V R + A + G A + + + Sbjct: 440 FA--RRLTHSYRMDVRDPAGRAILGAAQAMNR----------GETALALPIRRAAKELQW 487 Query: 1186 KLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIH 1245 E G A V D+ + R Sbjct: 488 HGIELLDTVGATGATEGTTAPAADIAAVNDFVDHWYDKRI-------------------- 527 Query: 1246 DVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLV-DNVYHRIAGISKDD 1304 A+ R+ T++ H DA + I + Sbjct: 528 ---------------------ASDREFARLSTKTFQRHDDAFTPEDAADLRALMSIYERS 566 Query: 1305 GLIT-LQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWT 1363 L+T + + I+ R G+ + ++D ERG Sbjct: 567 RLLTVTRRYDTGAEAINRRLHRRVITAASVDYGPDFYPGEPVMMRRNDYERGLFNGDQGV 626 Query: 1364 VTAV----SGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGT 1419 V V L+ + + H++LA+A+T H +QG+ + + Sbjct: 627 VVRVSENGEPQRFRLAFARGEEFAVFSLDALRMHVELAFAMTVHKSQGSEFSEVALVLPL 686 Query: 1420 EGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAH-DVFEPKPD 1475 E +A E Y ++R ++ V + AI ++ + D P PD Sbjct: 687 EA--IPLATREMLYTGVTRARRAVVLV-GAPALLRTAIAQRGERFSGLADKLAPAPD 740 Score = 117 bits (293), Expect = 4e-24, Method: Composition-based stats. Identities = 82/552 (14%), Positives = 140/552 (25%), Gaps = 65/552 (11%) Query: 327 LSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHV 386 + + ++ + + AR L A A R G + Sbjct: 180 IYQHRMLWCEDQLAARLRERLGGARDDTSMA----GRAAPRTTAGTAAGAAGDSAGAVAG 235 Query: 387 LDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQR 446 A + R + +V + + AV A R ++SG G G+ Sbjct: 236 DAASEDAASAALAAVLARPAMVGADAVVLSDEQAAAVR--AATRQRFCVISGGPG-TGKT 292 Query: 447 ERVAELVMMAREQGRE---VQIIAADRRSQMNMKQDERL--------------------S 483 V ++ G + A ++ M R Sbjct: 293 AIVVTILRTLARLGESPESALLAAPTGKAANRMGSSIRSALLAVPDPDPVDRQLLERASE 352 Query: 484 GELITGRRQL--------LEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLIT 535 + + TVIVD+ + + LL VL+ Sbjct: 353 PQTLHRLLGYVPVLDRFRQHENNPLRARTVIVDEASMIDAELMERLLRAVPSETRLVLLG 412 Query: 536 DSGQRTG--TGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKA 593 D+ Q G+ L + AG + + D R A Sbjct: 413 DADQLPSVDAGAVLRDLVAAGTGDDGGFARRLTHSYRMDVRDPAGRAILGAAQAM----N 468 Query: 594 GEESVAQVSGVREQAILTQAIRSELKTQGVLGLPE---------VTMTALSPVWLDSRSR 644 E+ + R L L T G G E + W D R Sbjct: 469 RGETALALPIRRAAKELQWHGIELLDTVGATGATEGTTAPAADIAAVNDFVDHWYDKRIA 528 Query: 645 YLRDMYRPGMVMEQWNPETRSHDRYVIDRV------TAQSHSLTLRDAQGETQVVRISSL 698 R+ R Q + + + + R ++ ++T R G + R Sbjct: 529 SDREFARLSTKTFQRHDDAFTPEDAADLRALMSIYERSRLLTVTRRYDTGAEAINRRLHR 588 Query: 699 DSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVP---GRAEP 755 + GE + + + GD+ V VSE+ R E Sbjct: 589 RVITAASVDYGPDFYPGEPVMMRRNDYERGLFNGDQGVVVRVSENGEPQRFRLAFARGEE 648 Query: 756 ATLPVSDSPFTALKLENGWVETPGHSVSDSATVFAS---VTQMAMDNATLNGLARSGRDV 812 + D+ ++L S +A G+ R+ R V Sbjct: 649 FAVFSLDALRMHVELAFAMTVHKSQGSEFSEVALVLPLEAIPLATREMLYTGVTRARRAV 708 Query: 813 RLYSSLDETRTA 824 L + RTA Sbjct: 709 VLVGAPALLRTA 720 >UniRef50_B1XZ26 Exodeoxyribonuclease V, alpha subunit n=4 Tax=cellular organisms RepID=B1XZ26_LEPCP Length = 739 Score = 222 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 97/647 (14%), Positives = 181/647 (27%), Gaps = 107/647 (16%) Query: 883 SMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLY--VDVAKGYGTGLLVSRASYEAE 940 + L + ++ + + A G+++ + L R + E Sbjct: 130 AQAALARQLRALGTDPGEWRAALLCSGAVAAAGEIVATGLASPLILSGSRLYLRRHFRDE 189 Query: 941 KSILRHILEGKEAVMPLMERVP-------------GELMEKLT------------SGQRA 975 +++ + ++ A MP+ E P ++ L QR+ Sbjct: 190 QAVAQAVVGRAAAAMPVAEGAPQAQPHAGTEPPDAAQVRLWLDRLFGGPPAPDRFDWQRS 249 Query: 976 ATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPES-ERPRVVGLGPTHRAVGEMR 1034 A + L R ++ G G GKT +++ V + + R+ PT +A ++ Sbjct: 250 ACAIAL--RGRLALITGGPGTGKTYTVARLLALVMAVHPQPQALRIALAAPTGKAAARLK 307 Query: 1035 SA------------------GV------DAQTLASFLHDTQLQQRSGETP--DFSNTLFL 1068 + G+ + TL L +R G L + Sbjct: 308 QSIDSALQQLAAALPGALDWGLLQQRLSQSLTLHKLLGARPDTRRFGRDARHPLEVDLLV 367 Query: 1069 LDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKE 1128 +DE+SMV MA R V GD DQL ++ G +A Sbjct: 368 VDEASMVHLEMMAA-LLAALPPASRLVLLGDKDQLASVEAGAVLGDLCVDAA-------- 418 Query: 1129 IVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLA 1188 E + I V +AL Q+ E E A Sbjct: 419 ----AGGYDEDTAAWIQACVGQALPQPFRCGQPGPLAQQTVMLRESRRFEGPIGALALAV 474 Query: 1189 EAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVR 1248 A + VP + +R TG TP A V Sbjct: 475 NAGDVTAARRLLGLGVPAPADDGSLRAPTGVTPAAVCDL------------------AVH 516 Query: 1249 EKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLIT 1308 +AG V L +R+G RR VL + L Sbjct: 517 GRAGNDASATGFVNYL--RLLREGAPRRADGPSPDGVRAVLQA--------FERCRVLCA 566 Query: 1309 LQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVS 1368 +++ E ++ + G + T++D G + Sbjct: 567 VREGEWGVAGLNAAIERQLRQQGWIARQGEWYEGRPVMVTRNDPALGVFNGDIGLALRGP 626 Query: 1369 GDSVTLSDGQQTREIRPGQEQAEQHI--------DLAYAITAHGAQGASETFAIALEGTE 1420 + + + + + AYA+T H +QG+ + + Sbjct: 627 AQPGGAQGAGGPLRVWFLDGEQPRSVLASRLAAVETAYAMTVHKSQGSEFEHTVLVLPPH 686 Query: 1421 GNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAH 1467 N + E Y ++R ++ + + A+ ++ + Sbjct: 687 AN--PVLTRELVYTGITRARRAFTLVAPEPAVFDLALQRRTRRASGL 731 Score = 93.1 bits (229), Expect = 8e-17, Method: Composition-based stats. Identities = 72/634 (11%), Positives = 149/634 (23%), Gaps = 91/634 (14%) Query: 282 KETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLA 341 E + P D Q A+ + + L ++ + + Sbjct: 96 DEWLASVDEAAAPTAPGGSHARPLTEPWLDGPADAQAALARQLRALGTDPGEWRAALLCS 155 Query: 342 RTVGILP-------PENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRA 394 V ++ +R + EQ + + + E + +A Sbjct: 156 GAVAAAGEIVATGLASPLILSGSRLYLRRHFRDEQAVAQAVVGR--AAAAMPVAEGAPQA 213 Query: 395 LSRDIMK-----QNRVTVHPEKSVPRTAG----YSDAVSVLAQDRPSLAIVSGQGGAAGQ 445 + Q R+ + P A ++ + R + G G+ Sbjct: 214 QPHAGTEPPDAAQVRLWLDRLFGGPPAPDRFDWQRSACAIALRGR---LALITGGPGTGK 270 Query: 446 RERVAELVMMA-----REQGREVQIIAADRRSQMNMKQDERL------------------ 482 VA L+ + + Q + + A ++ +KQ Sbjct: 271 TYTVARLLALVMAVHPQPQALRIALAAPTGKAAARLKQSIDSALQQLAAALPGALDWGLL 330 Query: 483 -----SGELITGRRQLL--------EGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHN 529 + + ++VD+ + L+ LL + Sbjct: 331 QQRLSQSLTLHKLLGARPDTRRFGRDARHPLEVDLLVVDEASMVHLEMMAALLAALPPAS 390 Query: 530 VQVLITDSGQR--TGTGSALMAM-KDAGVNTYRWQGGEQRPATIISEPDRNVR---YARL 583 VL+ D Q G+ L + DA Y A + + R L Sbjct: 391 RLVLLGDKDQLASVEAGAVLGDLCVDAAAGGYDEDTAAWIQACVGQALPQPFRCGQPGPL 450 Query: 584 AGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEV-------------- 629 A ++ + L GV + Sbjct: 451 AQQTVMLRESRRFEGPIGALALAVNAGDVTAARRLLGLGVPAPADDGSLRAPTGVTPAAV 510 Query: 630 -TMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQG 688 + D+ + + R + S D + + +G Sbjct: 511 CDLAVHGRAGNDASATGFVNYLRLLREGAPRRADGPSPDGVRAVLQAFERCRVLCAVREG 570 Query: 689 ETQVVRISSLDS---SWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVAS------ 739 E V +++ + + +G + VT P L V GD Sbjct: 571 EWGVAGLNAAIERQLRQQGWIARQGEWYEGRPVMVTRNDPALGVFNGDIGLALRGPAQPG 630 Query: 740 ---VSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMA 796 + + V +P ++ S ++ G + V Sbjct: 631 GAQGAGGPLRVWFLDGEQPRSVLASRLAAVETAYAMTVHKSQGSEFEHTVLVLPPHANPV 690 Query: 797 MDNAT-LNGLARSGRDVRLYSSLDETRTAEKLAR 829 + G+ R+ R L + R Sbjct: 691 LTRELVYTGITRARRAFTLVAPEPAVFDLALQRR 724 >UniRef50_A2C8A4 Possible exodeoxyribonuclease V 67 kD polypeptide n=2 Tax=Prochlorococcus marinus RepID=A2C8A4_PROM3 Length = 576 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 77/580 (13%), Positives = 142/580 (24%), Gaps = 119/580 (20%) Query: 905 GGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPL----MER 960 A + G L L R + ++++ ++ V Sbjct: 70 EAHCQALLASGWLEGAASPMVLNGNQLSWRRWHGDMDAVIKELINRSNVVQATSICTTPS 129 Query: 961 VPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRV 1020 L++ L Q+AA I + ++ G G GKT+ +++ L R+ Sbjct: 130 HHPALLDGLNPEQQAAVEAI--DNHGVVLLSGGPGTGKTSTIVQMLARAVTLRP--GLRI 185 Query: 1021 VGLGPTHRAVGEMRSA-----------------GVDAQTLASFLHDTQLQQRSGETPDFS 1063 PT +A + A + TL +L + Sbjct: 186 GLAAPTGKAARRLEEAVRKGLEAIPPTQRQALTSLPCSTLHRWLQARPGGFGRHQQHPLM 245 Query: 1064 NTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADV 1123 L ++DE SMV + M + + V GD DQL + G + Q Sbjct: 246 LDLLVIDEMSMVELSLMQALLS-ALPIDSQLVMIGDPDQLPPVGSGAVWHQLQQ------ 298 Query: 1124 AIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQ 1183 +I +Q ++ L +L+ L V Q + Sbjct: 299 ---ADIRQQFNHGAIHLHQLYRNRG--SLATLSRVLCDQGLSAFWQQLSLLPKSANVEQH 353 Query: 1184 EAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSM 1243 + + + + L Sbjct: 354 Q------------------------------------------CNLSSMPRFLVQHLQEH 371 Query: 1244 IHDVREKAGELG---KEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGI 1300 ++ EL + + N+ L + E G+ Sbjct: 372 SRTLQRLTAELMLELPDDAYTSTMLNTNLAVAAESLLDSLERLMVLCPKRRG----FWGV 427 Query: 1301 SKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANS 1360 + Q E + ++ E G Sbjct: 428 DDVHRALLGQSLEAGVMRWPLGT--------------------PVMCCENQAELGLANGD 467 Query: 1361 VWTVTAVSGDS---VTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALE 1417 V V + + Q R ++ A A+T H +QG+ I L Sbjct: 468 VGLVVGQGDNLRILFRVISEQGGLTTRFIHPARLSVVEPALALTVHKSQGSEADHVILLW 527 Query: 1418 GTEGNRKLM----------AGFESAYVALSRMKQHVQVYT 1447 + Y A++R +Q V + T Sbjct: 528 PEIKAVSATSADGFESASSFERKLLYTAITRARQRVDLVT 567 Score = 113 bits (282), Expect = 7e-23, Method: Composition-based stats. Identities = 52/454 (11%), Positives = 115/454 (25%), Gaps = 58/454 (12%) Query: 408 HPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAR-EQGREVQII 466 HP AV + D + ++SG G V L G + + Sbjct: 131 HPALLDGLNPEQQAAVEAI--DNHGVVLLSGGPGTGKTSTIVQMLARAVTLRPGLRIGLA 188 Query: 467 AADRRSQMNMKQDER----------------LSGELITGRRQLLEGMAFTPG------ST 504 A ++ +++ R L + Q G Sbjct: 189 APTGKAARRLEEAVRKGLEAIPPTQRQALTSLPCSTLHRWLQARPGGFGRHQQHPLMLDL 248 Query: 505 VIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR--TGTGSALMAMKDAGVNTYRWQG 562 +++D+ + L LL + V+I D Q G+G+ ++ A + G Sbjct: 249 LVIDEMSMVELSLMQALLSALPIDSQLVMIGDPDQLPPVGSGAVWHQLQQADIRQQFNHG 308 Query: 563 GEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQA-ILTQAIRSELKTQ 621 + L ++ + + + V + L+ R ++ Sbjct: 309 AIHLHQLYRNRGSLATLSRVLCDQGLSAFWQQLSLLPKSANVEQHQCNLSSMPRFLVQ-- 366 Query: 622 GVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSL 681 L T+ L+ + + P T + + + Sbjct: 367 -HLQEHSRTLQRLTAELM---------LELPDDAYTSTMLNTNLAVAAESLLDSLERLMV 416 Query: 682 TLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVS 741 +G V + SL M G + L ++ GD V Sbjct: 417 LCPKRRGFWGVDDVHRALLGQSL-EAGVMRWPLGTPVMCCENQAELGLANGDVGLVVGQG 475 Query: 742 EDAMTV--VVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFA--------- 790 ++ + V+ + T + + + ++ + Sbjct: 476 DNLRILFRVISEQGGLTTRFIHPARLSVVEPALALTVHKSQGSEADHVILLWPEIKAVSA 535 Query: 791 ------SVTQMAMDNATLNGLARSGRDVRLYSSL 818 + R+ + V L +++ Sbjct: 536 TSADGFESASSFERKLLYTAITRARQRVDLVTAM 569 >UniRef50_A8QYS1 TraA protein n=1 Tax=Fluoribacter dumoffii RepID=A8QYS1_9GAMM Length = 889 Score = 221 bits (561), Expect = 3e-55, Method: Composition-based stats. Identities = 108/724 (14%), Positives = 217/724 (29%), Gaps = 137/724 (18%) Query: 818 LDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVES 877 + + +A P + + + + R + I+ + L + A+ Sbjct: 190 DHRSYKEQGIALEPQYKIGPKDAQERMARLADHQRIARENGQLIFEQPEIALDAITRC-- 247 Query: 878 KKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASY 937 + F+ DL F + + +L+Y+ G ++ Sbjct: 248 -QSTFTHQDLARFINRHTENAAQFNLVFERVK---LSSELVYL-GLDKDGKQRFSTQNML 302 Query: 938 EAEKSILRHILEGKEAVMPLMER---VPGELMEKLTSGQRAATRMILETSDRFTVVQGYA 994 E S++ + + + + L+ Q +A + ++ D +++ GYA Sbjct: 303 HIESSMMHQSDMLHHRLGHEVCEKTVLLAQSSRTLSEEQESALCYLTQSGDLKSLL-GYA 361 Query: 995 GVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA-GVDAQTLASFLHDTQLQ 1053 G GK+ A + E RV G + A +R + G++++T+AS + Sbjct: 362 GTGKSYLLG----AAREIWEQSGYRVHGAALSGIAALNLRDSSGIESRTIASLFYRLDKG 417 Query: 1054 QRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFR 1113 S + ++DE+ M+G+ M R +A G + V GD QLQAI G FR Sbjct: 418 MFH----FTSRDILVVDEAGMLGSRTMERLTREVAQAGAKLVLVGDWQQLQAIEAGASFR 473 Query: 1114 LQQTRSAADVAIMKEIVRQTPELR-EAVYSLINRDVERALSGLESVKPSQVPRQEGAWAP 1172 + +I RQT + +A L V++AL ++ Sbjct: 474 AIAENY--QYVELNQIRRQTTPWQVDASLDLAQGAVDKALLAYDAHD------------- 518 Query: 1173 EHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTH 1232 + + + D L E R + +I+ + Sbjct: 519 ---------------------HVHRFISTHDAKHALIEQWND---VRIASPSDSQIILAY 554 Query: 1233 LNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDN 1292 +D + LN M ++ K G+LG++ V R + + D+L +++ Sbjct: 555 TRKDVKELNEMARVMKRKDGQLGEDVVF---NMERGERAFAVNDRVYFLKREDSLSVING 611 Query: 1293 VYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDR 1352 I GI+ G+IT+ + + T ++ ++ Sbjct: 612 TLGTIQGINAKSGIITVALDGDD-----------------------LKTKPQIVQVNTNY 648 Query: 1353 ERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETF 1412 + TV + AQG + Sbjct: 649 YKHMEHGYAATV--------------------------------------YKAQGVTVDR 670 Query: 1413 AIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNR-----QGWTDAINNAVQKGTAH 1467 A L + YVA++R + V+ + A++ K Sbjct: 671 AYVLPTAHYDAHST------YVAMTRHRNSCDVFVSREIFAYDKALIQALSRNRAKDITL 724 Query: 1468 DVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPARFIAPGRKYPQPYV 1527 D + + + L +++ +K Q Sbjct: 725 DYTQMQGEFARQ--RGLILDKSPTLSISSKEHFKTSERSLESLLNQVMGRDLQKEQQKLD 782 Query: 1528 ALPA 1531 A Sbjct: 783 AFEQ 786 Score = 180 bits (456), Expect = 5e-43, Method: Composition-based stats. Identities = 76/609 (12%), Positives = 176/609 (28%), Gaps = 76/609 (12%) Query: 242 REAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADL 301 E A+ ++R +A +D ++ + + + A +R Sbjct: 166 EHWREEWANCENRHLAL-------HGIDQKVDHRSYKEQGIALEPQYKIGPKDAQERMAR 218 Query: 302 RTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGI 361 A ++G + + A+ ++ + FT+ D+ + Sbjct: 219 LADHQRIARENGQLIFEQPEIALDAITRCQSTFTHQDLARFINRHTEN----AAQFNLVF 274 Query: 362 DEAISREQLIPL---DREKGLFTSGIHVLDELSVRALSRDIMKQNRVTV------HPEKS 412 + +L+ L K F++ + E S+ S + + V + S Sbjct: 275 ERVKLSSELVYLGLDKDGKQRFSTQNMLHIESSMMHQSDMLHHRLGHEVCEKTVLLAQSS 334 Query: 413 VPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRS 472 + A+ L Q +++ G G G+ + + + G V A + Sbjct: 335 RTLSEEQESALCYLTQSGDLKSLL-GYAG-TGKSYLLGAAREIWEQSGYRVHGAALSGIA 392 Query: 473 QMNMKQDERLSGELITGRRQLLEG--MAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNV 530 +N++ + I L+ FT ++VD+ L + L A+ Sbjct: 393 ALNLRDSSGIESRTIASLFYRLDKGMFHFTSRDILVVDEAGMLGSRTMERLTREVAQAGA 452 Query: 531 QVLITDSGQR---TGTGSALMAMKDA----GVNTYRWQGGEQRPATIISEPDRNVRYARL 583 ++++ Q+ G++ A+ + +N R Q + + V A L Sbjct: 453 KLVLVGDWQQLQAIEAGASFRAIAENYQYVELNQIRRQTTPWQVDASLDLAQGAVDKALL 512 Query: 584 AGDF-----------------------AASVKAGEESVAQVSGVREQAILTQAIRSELKT 620 A D + + ++ L + R + Sbjct: 513 AYDAHDHVHRFISTHDAKHALIEQWNDVRIASPSDSQIILAYTRKDVKELNEMARVMKRK 572 Query: 621 QGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHS 680 G LG V ++ R R + + + + I + A+S Sbjct: 573 DGQLGEDVVF-------NMERGERAFAVNDRVYFLKREDSLSVINGTLGTIQGINAKSGI 625 Query: 681 LTLRDAQGETQVVR-----------ISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRV 729 +T+ + + + ++++ + + V +R V Sbjct: 626 ITVALDGDDLKTKPQIVQVNTNYYKHMEHGYAATVYKAQGVTV---DRAYVLPTAHYDAH 682 Query: 730 SGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVF 789 S + S D + V A L + S A + + + G + Sbjct: 683 STYVAMTRHRNSCD-VFVSREIFAYDKALIQALSRNRAKDITLDYTQMQGEFARQRGLIL 741 Query: 790 ASVTQMAMD 798 +++ Sbjct: 742 DKSPTLSIS 750 >UniRef50_B2IL44 TrwC relaxase n=9 Tax=Alphaproteobacteria RepID=B2IL44_BEII9 Length = 1068 Score = 220 bits (560), Expect = 4e-55, Method: Composition-based stats. Identities = 122/820 (14%), Positives = 240/820 (29%), Gaps = 158/820 (19%) Query: 23 YYVLGSMGERWAGRGAEQLGLQGSVDK------DVFTRLLEGRLPDGADLSRMQDGSNRH 76 YY W +D + RL EG+ D + + R Sbjct: 48 YYTGRDSRATWRPDITPAFAKAAGIDPSQMPTSEALDRLFEGKRGDNGERWSQHE---RT 104 Query: 77 RPGYDLTFSAPKSVSMMAMLG----GDKRLIDAHNQAVDFAVRQVEALASTRVMTDGQSE 132 G+D TFS KSV++ A + +A ++A D A+R G E Sbjct: 105 LSGFDFTFSPHKSVTIAAEFAVTPAESAAIWNAIDRANDAAMRYAAGRLGFARRGKGGEE 164 Query: 133 TVLTGNLVMALFNHDTSR--------------------DQEPQLHTHAVVANV-TQHNGE 171 V G++ F H +R +PQ H H + N+ +G Sbjct: 165 GVDPGDVGWVSFRHHVARPTVELQDGKSGATYLVEAKTAGDPQAHIHNFLMNMVVTADGR 224 Query: 172 WKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVP- 230 +L++ ++ E G ++ +L +++ LG E K + +P Sbjct: 225 VGSLNTKELTSDLTHE--------LGGYFQARLADELRRLGAEIGYDKKDEAVVLEAIPQ 276 Query: 231 --VEAFSGRSQTIREAVGEDASLKSRDVAAL------------DTRKSKQHVDPEIKMAE 276 V+ FS R Q + + A + D L D + + Sbjct: 277 KAVDTFSKRRQQVLRSAKAFAKSQGLDWDELSIERKQTILNESSVVSRYAKQDGKGEKEA 336 Query: 277 WMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTY 336 W + G+ + A T ++ + Sbjct: 337 WKAQAEAIGWRHETVLNGVRHEA--LTDAERYDKAYDFAAKRLAEDFKTAAVLNHDRLRV 394 Query: 337 TDVLARTVGILPPENGVIERARAGIDE--AISREQLIPL------DREKGLFTSGIHVLD 388 V + I++ +++ + + + L D+ + T+ I + Sbjct: 395 HAVRGLIGAGIAHGRDDIDKVVTLLEQRGLTLQGEHVALITSRMEDKVRITNTAQIRIET 454 Query: 389 ELSVRALSRDIMKQNRVTVHPEKSVPRTAGY-----------SDAVSVLAQDRPSLAIVS 437 EL+ +A + K ++ K+ +G A + L +++ Sbjct: 455 ELANKARAVARDKDGALSAQTVKAAINASGLDFTTEPEHGAAQRAAIHALGEGGRLTLLT 514 Query: 438 GQGGAAGQRERVAELVMMAR------EQGREVQIIAADRRSQMNMKQD------------ 479 G G +G+ + LV + GREV +A R +K Sbjct: 515 GVAG-SGKTTLLQPLVAAWKADTRYDAGGREVIGVATAWRQADALKDAGIDKTVALQPFL 573 Query: 480 -----ERLSGEL------------ITGRRQLLEGMAFTP--GSTVIVDQGEKLSLKETLT 520 E + Q ++ P + +++D+ ++ + L Sbjct: 574 QSLGVEGQPDTTTLANAGIEKTAGVEALLQAIDKGTVKPTHNTVIVIDEVSQIGPRAMLK 633 Query: 521 LLDGAARHNVQVLITDSG---QRTGTGSALMAMKD--------AGVNTYRWQGGEQRPAT 569 LL+ A + + Q G + +K A + T R + R Sbjct: 634 LLEVQAETGMTIKALGDREQAQSIEAGDTIEILKRVLPKEALPALLTTVRQRTRRDRDIA 693 Query: 570 IISEP---------------------DRNVRYARLAGDFAASV------KAGEESVAQVS 602 + D++ ++A + + Sbjct: 694 NLFREGKAGEALGMKIEDGTARLLGGDQDQVIGQIADLYMQRRDILRAEDPKKSITVSAL 753 Query: 603 GVREQAILTQAIRSELKTQGVLGLPEVTMTALSPV----WLDSRSRYLRDMYRPGMVMEQ 658 ++ A ++QAIR LK +G +G E A+ L + +YR Sbjct: 754 TNQDAADISQAIRERLKARGEIGADEKLYKAIDQRGETYDLRIATGDKLRLYRRTWATID 813 Query: 659 WNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSL 698 + + +++ V + T +D +G V + L Sbjct: 814 GKGGSIGDNGDIVEVVGRSADGFTFKDKKGRIGSVEMRRL 853 Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats. Identities = 129/990 (13%), Positives = 263/990 (26%), Gaps = 170/990 (17%) Query: 525 AARHNVQVLITDSGQRTGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLA 584 + D Q + + + + +R + + +A Sbjct: 62 ITPAFAKAAGIDPSQMPTSEALDRLFEGKRGDNGERWSQHERTLSGFDFTFSPHKSVTIA 121 Query: 585 GDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSR 644 +FA + + + A+ A R +G G V + V Sbjct: 122 AEFAVTPAESAAIWNAIDRANDAAMRYAAGRLGFARRGKGGEEGVDPGDVGWVSFRHHVA 181 Query: 645 YLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSL 704 + G + E ++ + + A G + L S + Sbjct: 182 RPTVELQDGKSGATYLVEAKTAGDPQAHIHNFLMNMVV--TADGRVGSLNTKELTSDLTH 239 Query: 705 FRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSP 764 + LR G + VV+ + A S Sbjct: 240 ELGGYFQARLADELRRLGAE-------------IGYDKKDEAVVLEAIPQKAVDTFSKRR 286 Query: 765 FTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTA 824 L+ + ++ G + + + + N + + +D + E A Sbjct: 287 QQVLRSAKAFAKSQGLDWDE----LSIERKQTILNESSVVSRYAKQDGKG---EKEAWKA 339 Query: 825 EKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSM 884 + A V ++ A + ++ +A L + A Sbjct: 340 QAEAIGWRHETVLNGVRHEALTDAERYDKAYDFAAKRLAEDFKTAAVLNHDRLRVHAV-- 397 Query: 885 VDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSIL 944 L+ + + E +G+ + + ++ + + A E + Sbjct: 398 RGLIGAGIAHGRDDIDKVVTLLEQRGLTLQGEHVALITSRMEDKVRITNTAQIRIETELA 457 Query: 945 RHILEGKEAVMPLMERVPGELMEKLT-----------SGQRAATRMILETSDRFTVVQGY 993 + + + + QRAA L R T++ G Sbjct: 458 NKARAVARDKDGALSAQTVKAAINASGLDFTTEPEHGAAQRAAI-HALGEGGRLTLLTGV 516 Query: 994 AGVGKTTQFRAVMSAVNM--LPESERPRVVGLGPTHRAVGEMRSAGVD------------ 1039 AG GKTT + +++A ++ V+G+ R ++ AG+D Sbjct: 517 AGSGKTTLLQPLVAAWKADTRYDAGGREVIGVATAWRQADALKDAGIDKTVALQPFLQSL 576 Query: 1040 -------AQTLASF-------LHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYA 1085 TLA+ + G NT+ ++DE S +G M + Sbjct: 577 GVEGQPDTTTLANAGIEKTAGVEALLQAIDKGTVKPTHNTVIVIDEVSQIGPRAMLKLLE 636 Query: 1086 LIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADV--AIMKEIVRQTPELREAVYSL 1143 + A G A GD +Q Q+I G + + + A++ + ++T R+ Sbjct: 637 VQAETGMTIKALGDREQAQSIEAGDTIEILKRVLPKEALPALLTTVRQRTRRDRDIANLF 696 Query: 1144 INRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPD 1203 AL G + + Q+ + + M + + Sbjct: 697 REGKAGEAL---------------GMKIEDGTARLLGGDQDQVIGQIADLYMQRRDIL-- 739 Query: 1204 VPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPV 1263 R + ++ + N+D ++ I + + GE+G ++ Sbjct: 740 ---------------RAEDPKKSITVSALTNQDAADISQAIRERLKARGEIGADEK---- 780 Query: 1264 LNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPRE 1323 + +R T++ + A I G I Sbjct: 781 -----LYKAIDQRGETYDLRIATGDKLRLYRRTWATIDGKGGSIG--------------- 820 Query: 1324 AVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQT--- 1380 + V S D T D + Sbjct: 821 ---------------------------------DNGDIVEVVGRSADGFTFKDKKGRIGS 847 Query: 1381 REIRPGQEQAEQHIDLAY--AITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSR 1438 E+R + Q + L Y A+T AQG + I YVA SR Sbjct: 848 VEMRRLIDPKTQRLMLGYGHALTIDAAQGLTSEEHINALPRGSAGISSFKG---YVAESR 904 Query: 1439 MKQHV-QVYTDNRQGWTDAINNAVQKGTAH 1467 + + + A++ A ++ A Sbjct: 905 SRGATWTLVSG------AAVHEAEKRSRAL 928 >UniRef50_Q5HXP7 Conjugal transfer protein TraA n=1 Tax=Gluconobacter oxydans RepID=Q5HXP7_GLUOX Length = 1067 Score = 220 bits (560), Expect = 4e-55, Method: Composition-based stats. Identities = 151/1019 (14%), Positives = 282/1019 (27%), Gaps = 118/1019 (11%) Query: 23 YYVLGSMGERWAG----RGAEQLGLQGSVDK--DVFTRLLEGRLPDGADLSRMQDGSNRH 76 YY WA R A QLG+ + + RL EG+ D + +NR Sbjct: 51 YYTGRDARGSWAPDMSERIASQLGIDVTTRPTDEALARLFEGKRADTGE-KWAGAHANRE 109 Query: 77 RPGYDLTFSAPKSVSMMAMLGGDKR----LIDAHNQAVDFAVRQVEALASTRVMTDGQSE 132 G D T + KSV++ A K + A +QA D A+ + G Sbjct: 110 ISGIDFTAAPDKSVTLAAEFASTKAEEALIWSAIHQANDRAMAFIAKEIGIARRGKGGVS 169 Query: 133 TVLTGNLVMALFNHDTSR--------------------DQEPQLHTHAVVANVTQHN-GE 171 G++ F H T+R +PQ H H ++ N G Sbjct: 170 YNEGGDVGWVSFRHYTARPVMKIQDGAQGPTAAVEVLVPGDPQAHIHNIMFNAVATESGH 229 Query: 172 WKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPV 231 +L S +V FG ++ +L ++ LG +V + + G+P Sbjct: 230 LGSLDSKRVTGMTS--------HMFGGYFQAELASELRKLGIRVDVDARGKAVVLNGIPE 281 Query: 232 EA---FSGRSQTIREAVGEDASLKSRDVAALDTRKSKQHVDPEIK------------MAE 276 EA FS RS+ + D A+ + + + Sbjct: 282 EARELFSKRSKQAERMAKAFVKRQGGDWKAMSAEQKFKILHQANLTYRSNKYTGRNERDI 341 Query: 277 WMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTY 336 W + E G+ D++ L + G + + + F Sbjct: 342 WREEADEIGWHHDTV--LTDEKTVLLSQAERFEKAYGIAAKMLADEFRTAAVIDRDAF-R 398 Query: 337 TDVLARTVGILPPENGVIERARAGIDEA--ISREQLI----PLDREKGLFTSGIHVLDEL 390 T + +ER I E QL+ + + + E Sbjct: 399 THAAHGLIAAGIEGMEDVERVADMIQERGIEIDGQLVRFLEREQDGRLRVATSAQIALEK 458 Query: 391 SVR------ALSRDIMKQNRVTVHPEKSVPRT--------AGYSDAVSVLAQDRPSLAIV 436 + A +RD + A A++ L Q ++ Sbjct: 459 DMARLAGLSARTRDGALSDEQIAAAVARSGLDFTREPAHGAAQLAAINALGQAGGLGFLI 518 Query: 437 SGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRR--QLL 494 G +G+ + LV +E GR V A R +K +T Sbjct: 519 GVAG--SGKTTLLKPLVDAWQEDGRTVIGAAIAWRQADALKDAGISQTYAMTPLLDGLAQ 576 Query: 495 EGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSG---QRTGTGSALMAMK 551 + S +++D+ ++S ++ L +L + + Q G A+ + Sbjct: 577 GKIDLDRQSVLVLDEVSQVSPRQLLEILQLQQEKGFALRVVGDREQAQAIEAGDAVELLL 636 Query: 552 DAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILT 611 R + + D + + +++ R + + Sbjct: 637 RVMPKEARPELLSTIRQKSARGRQIASMFRSPGRDLSQTEDEQKKADI----ARAREAI- 691 Query: 612 QAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVME-QWNPETRSHDRYV 670 R + + V G + + ++ ++L R + G+ M N + R V Sbjct: 692 DMKRKDGTIRLVGGDHDQVVEQIADLYLRRRDMLTQAGSERGITMSAPTNEDVMDLSRAV 751 Query: 671 IDRVTAQSH------SLTLRDAQGETQVVRISSLDS-SWSLFRPEKMPVADGERLRVTGK 723 DR+ + D +G T + ++ D +M A G R R G Sbjct: 752 RDRLRKRGEIGQAEIVKAAIDQRGVTYELPLAVGDRVRLFAKTSVRMETAHGRRWRDLG- 810 Query: 724 IPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSP----FTALKLENGWVETPG 779 S GD V S++ + + E + L + Sbjct: 811 ------SNGDFTTVKGWSDEGLVLQNAKGREGLVPWTRLADPKTGRVRLGFGHAMTVDAA 864 Query: 780 HSVSDSATV--FASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVS 837 V+ + + + +R S R AE +R Sbjct: 865 QGVTSDEHINAMPRGSSAMTGFTSYVAESRHVHRCWTAVSEGSLREAETFSR------AL 918 Query: 838 EQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAE 897 I+ + S + + A E + + + E + Sbjct: 919 GDIRPVTVNDLYDRLASDMGRHPYKSLAVDLAKARLAHEEANTRWIRQNHVNERTRQKGQ 978 Query: 898 GTGFTELGGEINAQIKRGDLLYVDVAKGYGTGL-LVSRASYEAEKSILRHILEGKEAVM 955 G A I+ D ++ + A + + + Sbjct: 979 SPGGQVRRQVEEAPIRDVPRAQWDDVSRKLRKAGYAAQDALNAARRVEDLQERRRTQQA 1037 Score = 124 bits (310), Expect = 4e-26, Method: Composition-based stats. Identities = 115/828 (13%), Positives = 216/828 (26%), Gaps = 127/828 (15%) Query: 733 DRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASV 792 V VV+ G E A S A ++ +V+ G + ++ Sbjct: 260 KLGIRVDVDARGKAVVLNGIPEEARELFSKRSKQAERMAKAFVKRQGGD-------WKAM 312 Query: 793 TQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETA 852 + + + + E V KT + Sbjct: 313 SAEQKFKILHQANLTYRSNKYTGRNERDIWREEADEIGWHHDTVLTDEKTVLLSQAERFE 372 Query: 853 ISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQI 912 ++ +A + + + A L+ + ++ E +I Sbjct: 373 KAYGIAAKMLADEFRTAAVIDRDAFRTHAA--HGLIAAGIEGMEDVERVADMIQERGIEI 430 Query: 913 KRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHI-----LEGKEAVMPLMERVPGELME 967 G L+ + G + + A EK + R + Sbjct: 431 -DGQLVRFLEREQDGRLRVATSAQIALEKDMARLAGLSARTRDGALSDEQIAAAVARSGL 489 Query: 968 KLTSGQRA-----ATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVG 1022 T A L + + G AG GKTT + ++ A + + V+G Sbjct: 490 DFTREPAHGAAQLAAINALGQAGGLGFLIGVAGSGKTTLLKPLVDA----WQEDGRTVIG 545 Query: 1023 LGPTHRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMAR 1082 R ++ AG+ +QT A G+ ++ +LDE S V + Sbjct: 546 AAIAWRQADALKDAGI-SQTYAM--TPLLDGLAQGKIDLDRQSVLVLDEVSQVSPRQLLE 602 Query: 1083 AYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVA-IMKEIVRQTPELREAVY 1141 L G GD +Q QAI G L + + +RQ + Sbjct: 603 ILQLQQEKGFALRVVGDREQAQAIEAGDAVELLLRVMPKEARPELLSTIRQKSARGRQIA 662 Query: 1142 SLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAF 1201 S+ P + Q + + + + K + + + Sbjct: 663 SMFR-------------SPGRDLSQTEDEQKKADIARAREAIDMKRKDGTIRLVGGDHDQ 709 Query: 1202 PDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMV 1261 + RD + R T + NED L+ + D K GE+G+ +++ Sbjct: 710 VVEQIADLYLRRRDMLTQAGSERGIT-MSAPTNEDVMDLSRAVRDRLRKRGEIGQAEIVK 768 Query: 1262 PVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISP 1321 + + Sbjct: 769 AAI------------------------------------------------DQRGVTYEL 780 Query: 1322 REAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTR 1381 AV + V L+ ++R+ T R+ TV S + + L + + Sbjct: 781 PLAVGDRVRLFAKTSVRMETAHGRRWR-----DLGSNGDFTTVKGWSDEGLVLQNAKGRE 835 Query: 1382 EIRPGQEQAEQ-----HIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVAL 1436 + P A+ + +A+T AQG + I + YVA Sbjct: 836 GLVPWTRLADPKTGRVRLGFGHAMTVDAAQGVTSDEHINAMPRGSSAMTGFTS---YVAE 892 Query: 1437 SRMKQHV------------------------QVYTDNRQGWTDAINNAVQKGTAHDVFEP 1472 SR D + K A D+ + Sbjct: 893 SRHVHRCWTAVSEGSLREAETFSRALGDIRPVTVNDLYDRLASDMGRHPYKSLAVDLAKA 952 Query: 1473 KPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPARFIAPGR 1520 + E N + R G++ Q ++P R + + Sbjct: 953 RLAHEEANTRWIRQNHVNERTRQKGQSPGGQVRRQVEEAPIRDVPRAQ 1000 >UniRef50_C5RAF5 Exodeoxyribonuclease V alpha subunit n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RAF5_WEIPA Length = 834 Score = 219 bits (557), Expect = 7e-55, Method: Composition-based stats. Identities = 101/928 (10%), Positives = 233/928 (25%), Gaps = 157/928 (16%) Query: 649 MYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPE 708 Y+ + D + + +G+ + + + + Sbjct: 34 FYKVLRITILEKNFDFDDDEMTVTGNFGDIQIGASYEFKGQLKKHARYGIQFVAMNYHRQ 93 Query: 709 KMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTAL 768 G + + V ++ DA+ +++ + + +S+ T + Sbjct: 94 ATSSVSGLVAYFSSEKFPGVGKATATKIVDTLGTDAIDLILDNSKVLSNIGLSEKVQTVI 153 Query: 769 KLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLA 828 + + + + +Y + Sbjct: 154 VDQLA----KSDGMERAIIALNDFGFGSN------------LATTIYQKYQQETLTILKN 197 Query: 829 RHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLL 888 + + + + + A + L ES + DLL Sbjct: 198 NPYQLVIDIDGVSFKRIDQFALQQGIDALDDRRVSAGVIAAINLKTFESGDTYMVLPDLL 257 Query: 889 TEAKSFA----AEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSIL 944 K + + + + G ++ L R +E+E I Sbjct: 258 ATTKHLLEHAQRIEVDESLIKQALLTLTQEGVVVA-------DGSYLYIREIFESENQIA 310 Query: 945 RHILEG---------KEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFT------- 988 + +++ ++ V+ ++ V K + QR A L Sbjct: 311 KELIDLTERKQQTYSRKDVVKYLDEVESANDFKYDATQREAIIAALTNQLFILTGGPGTG 370 Query: 989 ---VVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRS-AGVDAQTLA 1044 ++ G + ++ + + V + PT RA ++ G+ A T+ Sbjct: 371 KTTIISGVVAT-----LKKLLRQDGIKSDEIDQGVHLVAPTGRAAKRLQESTGMAASTIH 425 Query: 1045 SFLHDTQLQQRSGETPD--FSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQ 1102 L T + + + L ++DE SMV A + + + + GD DQ Sbjct: 426 HLLGITGREANLDDVDIEELTGQLLVVDEMSMVDTQLFATLLSAVR-ADMQVILVGDKDQ 484 Query: 1103 LQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQ 1162 L ++ PG+ F + ++ I RQ +S VK + Sbjct: 485 LPSVGPGRVFYDLLASGILNYRELETIHRQ-------------GKGSTIISLANDVKNGR 531 Query: 1163 VPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPE 1222 +P + S Q L E + K + + + Y Sbjct: 532 LPDDFTDQKIDRSFFSAELRQVPNLVEKIATSWQKKGN----SVADMQILAPMYR----- 582 Query: 1223 AREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWET 1282 LN + ++ + Sbjct: 583 ----------TQAGVNHLNEIAQNI-----------------------------FNPITN 603 Query: 1283 HRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTG 1342 + +++ + + T + + + + E + TI + Sbjct: 604 KKKTILVKNGDF-----------TFTFRVGDKVMQTTNDPENNVFNGDIGYISTILLA-- 650 Query: 1343 DRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITA 1402 + V VS D+ + ++ + + A T Sbjct: 651 -----------KDKANTDKKDVITVSFDTGEVIYTRENW--------QQLTLAYA--TTI 689 Query: 1403 HGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQ 1462 H +QG + + M Y L+R + + + + V Sbjct: 690 HKSQGTEYK--LVIMPLVNAFSRMLQRNLLYTGLTRASESLVLLGQESAYQQAVLTTGVN 747 Query: 1463 KGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPARFIAPGRKY 1522 + T + + + + + L L+ D+ Sbjct: 748 RQTTLQ---ARIMQYANQQVGSRENQQLVDESKNEADSLASQPLSHDDTD--LPTATAAK 802 Query: 1523 PQPYVALPAFDRNGKSAGIWLNPLTTDD 1550 + + + N S I L+ LT D Sbjct: 803 DNYILTVDLINSNKISPNIGLDGLTPAD 830 Score = 172 bits (434), Expect = 2e-40, Method: Composition-based stats. Identities = 87/638 (13%), Positives = 179/638 (28%), Gaps = 105/638 (16%) Query: 290 AYRDAADQRADLRTLTPGPASQDGPDVQQAVTQA--IAGLSERKVQFTYTDVLARTVGIL 347 + +R D L G + D V V A + D+LA T L Sbjct: 205 DIDGVSFKRIDQFALQQGIDALDDRRVSAGVIAAINLKTFESGDTYMVLPDLLATT-KHL 263 Query: 348 PPENGVIERARAGIDEAI---SREQLIPLDR----EKGLFTSGIHVL------DELSVRA 394 IE + I +A+ ++E ++ D + +F S + E + Sbjct: 264 LEHAQRIEVDESLIKQALLTLTQEGVVVADGSYLYIREIFESENQIAKELIDLTERKQQT 323 Query: 395 LSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLA----------IVSGQGGAAG 444 SR + + V A +A+ ++ + I+SG Sbjct: 324 YSRKDVVKYLDEVESANDFKYDATQREAIIAALTNQLFILTGGPGTGKTTIISG------ 377 Query: 445 QRERVAELVMMAREQGRE-------VQIIAADRRSQMNMKQDERLSGELITGRRQLLEGM 497 VA L + R+ G + V ++A R+ +++ ++ I + Sbjct: 378 ---VVATLKKLLRQDGIKSDEIDQGVHLVAPTGRAAKRLQESTGMAASTIHHLLGITGRE 434 Query: 498 --------AFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR--TGTGSAL 547 G ++VD+ + + TLL +L+ D Q G G Sbjct: 435 ANLDDVDIEELTGQLLVVDEMSMVDTQLFATLLSAVRADMQVILVGDKDQLPSVGPGRVF 494 Query: 548 MAMKDAGVNTYRWQGGEQRPATIISEPD--RNVRYARLAGDFAASVKAGEESVAQVSGVR 605 + +G+ YR R + +V+ RL DF + + +R Sbjct: 495 YDLLASGILNYRELETIHRQGKGSTIISLANDVKNGRLPDDF---TDQKIDRSFFSAELR 551 Query: 606 EQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRS 665 + L + I + + +G M L+P++ + Sbjct: 552 QVPNLVEKIATSWQKKG---NSVADMQILAPMYRTQAGVNHLNEIAQN------------ 596 Query: 666 HDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIP 725 + + +T + ++ +++ G+++ T P Sbjct: 597 ----IFNPITNKKKTILVKNGD--------------------FTFTFRVGDKVMQTTNDP 632 Query: 726 GLRVSGGDRLQVASVSEDAMTVVVPGRA------EPATLPVSDSPFTALKLENGWVETPG 779 V GD ++++ + + + + + L L Sbjct: 633 ENNVFNGDIGYISTILLAKDKANTDKKDVITVSFDTGEVIYTRENWQQLTLAYATTIHKS 692 Query: 780 HSVSDSATVFA---SVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVV 836 + + ++M N GL R+ + L + A T + Sbjct: 693 QGTEYKLVIMPLVNAFSRMLQRNLLYTGLTRASESLVLLGQESAYQQAVLTTGVNRQTTL 752 Query: 837 SEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPV 874 +I A + A L Sbjct: 753 QARIMQYANQQVGSRENQQLVDESKNEADSLASQPLSH 790 >UniRef50_D0L8X2 Exodeoxyribonuclease V, alpha subunit n=2 Tax=Corynebacterineae RepID=D0L8X2_GORB4 Length = 641 Score = 219 bits (557), Expect = 8e-55, Method: Composition-based stats. Identities = 94/586 (16%), Positives = 168/586 (28%), Gaps = 103/586 (17%) Query: 915 GDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSG-- 972 G L + + LL + + E++I + + ++ + Sbjct: 116 GPLRPLMLMGSDDGPLLYLQKYFRQEETIRTVLAARAATSPQVDPDRLRSAIDTVFGDVT 175 Query: 973 -------QRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGP 1025 QR A ++ TV+ G G GKT +++ + ++ RV P Sbjct: 176 SSETVDLQRLAAAVVAS--RWTTVLAGGPGTGKTYTVARILAVLQIVHGGS-LRVGLCAP 232 Query: 1026 THRAVGEMR-------SAGVD-----------AQTLASFLHDTQLQQ-RSGETPDFSNTL 1066 T RA +++ SAG+D A T+ S L R G + + Sbjct: 233 TGRAAAQLQASVSPGGSAGLDPTLITGAGALHAVTVHSLLGWYPGSNPRFGRGHTLPHDV 292 Query: 1067 FLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIM 1126 ++DE+SM+ T M+R R + GD QL ++ G R+ Sbjct: 293 IVVDETSMLSMTAMSRVLDAARP-DARVIFVGDPHQLASVDAGAVLADLVERTD------ 345 Query: 1127 KEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPR-QEGAWAPEHSVTEFSHSQEA 1185 + E A +L + E++ P + R G Sbjct: 346 TDPGPAAGESAHASIALQAAGIGPERVSAEAIGPGEAARISRGVITLRREYRFGGGIAAV 405 Query: 1186 KLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIH 1245 A A + D ++ E I D D Sbjct: 406 AAAVNAGDATRVIDLLTDPDVSDIELIAPDNIDA-------------TRPDVT------- 445 Query: 1246 DVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDG 1305 G+E + A+ L HR+ V R+A Sbjct: 446 -------AWGRELRTAALACDAHAAVEALDSHRVLCAHREGYWGVRGWSRRVAE------ 492 Query: 1306 LITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVT 1365 + D G + T +DR+ + Sbjct: 493 -----------------------WLGHDADRPGWFAGQPILVTANDRQTRTFNGDTGVII 529 Query: 1366 AV----SGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEG 1421 D + ++ + E+R + I YA+T H +QG+ + G Sbjct: 530 RDPHSGDPDDLRVAFRRG-GEVRLLRRTQLAEISTVYAMTIHRSQGSQFDRVTVVLPPSG 588 Query: 1422 NRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAH 1467 + + E Y A++R + V+V A+ VQ+ + Sbjct: 589 SE--LLTRELLYTAITRARTAVRVVAA-PDVVRAAVERRVQRASGL 631 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 67/508 (13%), Positives = 133/508 (26%), Gaps = 51/508 (10%) Query: 366 SREQLIPLDREKGLFTSGIHVLDELSVR--ALSRDIMKQNRVTVHPEKSVPRTAGYSDAV 423 L+ L + + VL + + D ++ TV + + T Sbjct: 127 DDGPLLYLQKYFRQEETIRTVLAARAATSPQVDPDRLRSAIDTVFGDVTSSETVDLQRLA 186 Query: 424 SVLAQDRPSLAIVSGQGGAAGQRERVA---ELVMMAREQGREVQIIAADRRSQMNMKQDE 480 + + R + + G G G+ VA ++ + V + A R+ ++ Sbjct: 187 AAVVASRWTTVLAGGPG--TGKTYTVARILAVLQIVHGGSLRVGLCAPTGRAAAQLQASV 244 Query: 481 -----------------RLSGELITGRRQLLEGMAFT-------PGSTVIVDQGEKLSLK 516 L + G P ++VD+ LS+ Sbjct: 245 SPGGSAGLDPTLITGAGALHAVTVHSLLGWYPGSNPRFGRGHTLPHDVIVVDETSMLSMT 304 Query: 517 ETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDR 576 +LD A + +V+ + + A + D R A + Sbjct: 305 AMSRVLDAARP-DARVIFVGDPHQLASVDAGAVLAD---LVERTDTDPGPAAGESAHASI 360 Query: 577 NVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSP 636 ++ A + + ++ G A++S R L + R V Sbjct: 361 ALQAAGIGPERVSAEAIGPGEAARIS--RGVITLRREYRFGGGIAAVAAAVNAGDATRVI 418 Query: 637 VWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTA---------QSHSLTLRDAQ 687 L ++ P + T + SH + + Sbjct: 419 DLLTDPDVSDIELIAPDNIDATRPDVTAWGRELRTAALACDAHAAVEALDSHRVLCAHRE 478 Query: 688 GETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASV----SED 743 G V S + W ++ G+ + VT R GD + D Sbjct: 479 GYWGVRGWSRRVAEWLGHDADRPGWFAGQPILVTANDRQTRTFNGDTGVIIRDPHSGDPD 538 Query: 744 AMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNA-TL 802 + V E L + + + G V + Sbjct: 539 DLRVAFRRGGEVRLLRRTQLAEISTVYAMTIHRSQGSQFDRVTVVLPPSGSELLTRELLY 598 Query: 803 NGLARSGRDVRLYSSLDETRTAEKLARH 830 + R+ VR+ ++ D R A + Sbjct: 599 TAITRARTAVRVVAAPDVVRAAVERRVQ 626 >UniRef50_A9L0I2 Exodeoxyribonuclease V, alpha subunit n=12 Tax=Shewanella RepID=A9L0I2_SHEB9 Length = 740 Score = 219 bits (557), Expect = 8e-55, Method: Composition-based stats. Identities = 72/631 (11%), Positives = 158/631 (25%), Gaps = 118/631 (18%) Query: 926 YGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMI----L 981 + G L + ++ E S+ ++ +V + T+ R+ + + Sbjct: 133 FDNGRLYLQRYHQFETSVAASLIRLSGSVSKHFSEEVNHQEQTQTAKLRSLLDQLFPATV 192 Query: 982 ETSDRF-------TVVQGYAGVGKT-----------TQFRAVMSAVNMLPE--------- 1014 +V+ T T ++ + P Sbjct: 193 SDPHSLTTNVLTTSVITKSDSTQSTAPIDWQKVATATALGKKLAVITGGPGTGKTTTVTK 252 Query: 1015 -------SERPRVVGLGPTHRAVGEMRSAGV----------------------------- 1038 + + + PT +A + + Sbjct: 253 LLLLLQMESQQEIRLVAPTGKAAARLSESIKASKARLAKELSAHTDVVDEARNRNNQDFL 312 Query: 1039 --------DAQTLASFLHDTQL--QQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIA 1088 +A TL L R + L ++DE+SMV M + + + Sbjct: 313 TALGRIPEEASTLHRLLGVIPNSPHFRHHQGNPLRLDLLIVDEASMVDLPMMYKLLSALP 372 Query: 1089 AGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDV 1148 + GD DQL ++ G V + Q R Sbjct: 373 EH-ASLILLGDQDQLASVEAGAVLADICAGLKMPVEP--NNLAQNNTASNNSALWQMRYS 429 Query: 1149 ERALSGLESVKPSQVPRQEGAWAPE--------HSVTEFSHSQEAKLAEAQQKAMLKGEA 1200 + L ++ ++ HS + +LA A +A L+G Sbjct: 430 KEQAERLSALTGFELTPYISDAPKLGDSLCMLMHSHRFKGDAGIGQLASAVNRADLQGIL 489 Query: 1201 FPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVM 1260 + + + + + N LN ++ ++ G Sbjct: 490 QVWQQGPAELSWLEHSMALSQTQAKVSE---PANNM--GLNLLLEQACQQYGIYLSALNS 544 Query: 1261 VPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLIS 1320 + + R + ++ +R + Y G+ + +T A Sbjct: 545 DENHSDLSKRPSTAEIIESFNQYRILCAMRSGDY----GVEGINQYVTQALANAKLIKPL 600 Query: 1321 PREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGD--SVTLSDGQ 1378 G + +D G + + + + Sbjct: 601 ----------------QEFYLGRPIIIQSNDYNLGLFNGDIGLILQDEDKPERLMAHFIK 644 Query: 1379 QTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEG--TEGNRKLMAGFESAYVAL 1436 + + YA+T H +QG+ + + + + E Y A+ Sbjct: 645 ADGSLLKVLPARLPSHETCYAMTVHKSQGSEFSRVALVLPPNPSLAQWQLLTKELVYTAI 704 Query: 1437 SRMKQHVQVYTDNRQGWTDAINNAVQKGTAH 1467 +R K H + + A + A Q+ + Sbjct: 705 TRAKVHFT-CLGTQHVFERASSQATQRASGL 734 Score = 98.2 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 42/481 (8%), Positives = 109/481 (22%), Gaps = 99/481 (20%) Query: 458 EQGREVQIIAADRRSQMNMKQDER------------------------------------ 481 E +E++++A ++ + + + Sbjct: 260 ESQQEIRLVAPTGKAAARLSESIKASKARLAKELSAHTDVVDEARNRNNQDFLTALGRIP 319 Query: 482 LSGELITGRRQLLEGMAFTPG--------STVIVDQGEKLSLKETLTLLDGAARHNVQVL 533 + ++ +IVD+ + L LL H +L Sbjct: 320 EEASTLHRLLGVIPNSPHFRHHQGNPLRLDLLIVDEASMVDLPMMYKLLSALPEHASLIL 379 Query: 534 ITDSGQR--TGTGSALMAMKDA--------GVNTYRWQGGEQRPATIISEPDRNVRYARL 583 + D Q G+ L + + + ++ R + L Sbjct: 380 LGDQDQLASVEAGAVLADICAGLKMPVEPNNLAQNNTASNNSALWQMRYSKEQAERLSAL 439 Query: 584 AGD----FAASVKAGEESVAQVSGVRE------QAILTQAI-RSELKTQGVLGLPEVTMT 632 G + + +S+ + L A+ R++L+ + Sbjct: 440 TGFELTPYISDAPKLGDSLCMLMHSHRFKGDAGIGQLASAVNRADLQGILQVWQQGPAEL 499 Query: 633 ALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVI--DRVTAQSH----------- 679 + + + P M ++ +Y I + + + Sbjct: 500 SWLEHSMALSQ-TQAKVSEPANNMGLNLLLEQACQQYGIYLSALNSDENHSDLSKRPSTA 558 Query: 680 ---------SLTLRDAQGETQVVRISSLDSSWSL---FRPEKMPVADGERLRVTGKIPGL 727 + G+ V I+ + G + + L Sbjct: 559 EIIESFNQYRILCAMRSGDYGVEGINQYVTQALANAKLIKPLQEFYLGRPIIIQSNDYNL 618 Query: 728 RVSGGDRLQVASVSED-AMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSA 786 + GD + + + +A+ + L V + + + S Sbjct: 619 GLFNGDIGLILQDEDKPERLMAHFIKADGSLLKVLPARLPSHETCYAMTVHKSQGSEFSR 678 Query: 787 TVFA-------SVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQ 839 + Q+ + R+ + A A + + Sbjct: 679 VALVLPPNPSLAQWQLLTKELVYTAITRAKVHFTCLGTQHVFERASSQATQRASGLADRL 738 Query: 840 I 840 Sbjct: 739 W 739 >UniRef50_C4WLD2 Ti-type conjugative transfer relaxase TraA n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WLD2_9RHIZ Length = 1322 Score = 219 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 146/1026 (14%), Positives = 276/1026 (26%), Gaps = 148/1026 (14%) Query: 774 WVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSF 833 V T ++ + D R ++ A++ Sbjct: 185 IVYTVWAGNRETMKAWKIAWAQTASRYLALAGRDIRLDGRSHAEQGLDGIAQRHLGPGKS 244 Query: 834 TVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKS 893 ++ + ++ L L P L + +++ F D+ Sbjct: 245 AMMRKGVEMYFAPADLARRRKMTARLLADPEPL-----LRQLGNERSTFDEKDIARVIHR 299 Query: 894 FAAEGTGFTELGGEINAQIK----------------RGDLLYVDVAKGYGTGLLVSRASY 937 + + F + + A +G + + + +R Sbjct: 300 YVDDPADFANIRARLMASPDLVLLKPQQSGALTDPIKGRVNGRVKGEATEPAIFTTRKIL 359 Query: 938 EAEKSILRHIL------------EGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSD 985 E +++R G+ A + +E +L Q A + + Sbjct: 360 RTEHNMMRSADILSGRKGFGISDAGRAAALRFVEEDNPLKPFRLDLEQIEAIQHV-TGDS 418 Query: 986 RFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAG-VDAQTLA 1044 V G AG GK+T +++A + ES RV+G + +A + + + ++TLA Sbjct: 419 GIAAVVGLAGTGKST----LLAAARLAWESGHHRVLGAALSGKAAEGLEESSAIRSRTLA 474 Query: 1045 SFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQ 1104 ++ + +G + ++DE+ MV + MAR + G + V GD QLQ Sbjct: 475 AW----EHAWNNGRDQLMRGDILVIDEAGMVSSLQMARVLDAVEKAGAKVVLVGDAMQLQ 530 Query: 1105 AIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVP 1164 I G FR R A + + RQ E L R A Sbjct: 531 PIGAGAAFRAISER--ISSAELAGVRRQQDEWARDASKLFARGDTAA------------- 575 Query: 1165 RQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAR 1224 + A + L +VRD+T Sbjct: 576 ------------------------GLEIYARRGHLVEAETRDALIGRLVRDWTDA----- 606 Query: 1225 EQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHR 1284 + ++T R V G+L + ++V +R Sbjct: 607 -RRKLITPSQTGRGVQPGTGIAAPNGGGQLPGDALLVLAHT-----------------NR 648 Query: 1285 DALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDR 1344 D L + + + DG + G + + + Sbjct: 649 DVHRLNEALRKVMREEGALDGARRFRTERGMREFAAGDRIIFLENARFLEPR-------- 700 Query: 1345 MRFTKSDRERGYVANSVWTVTAVSG--DSVTLSDGQQTREIRPGQEQAEQHIDLAYAITA 1402 + +R + TV + + LS + E + ++ID YA+T Sbjct: 701 ---ARGNRPQYVRNGMFGTVVSTGNAFRAPLLSVRLDSGNEIVLSEDSYRNIDHGYAVTI 757 Query: 1403 HGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAV- 1461 H +QGA+ + L +R L V+++R + +Y + + + Sbjct: 758 HKSQGATVDRTLVLASGMMDRHLTC------VSMTRHRHRADLYAAREDFRPEREDRSRI 811 Query: 1462 --QKGTAHDVFE----------------PKPDREVMNAERLFSTARELRDVAAGRAVLRQ 1503 KG ++ E P D +V + L + + Sbjct: 812 DYAKGITGELVETGVTKFRSWDEDTNDTPYADLKVEGGKVHRLRGVGLPAALSAAGASKG 871 Query: 1504 AGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGEGRV 1563 + ++ P F+ +W L G + GE Sbjct: 872 DTVTLRKDGVETVSVKIAVPDAQGGERRFEERTVERNVWTARLHEATGVRRKSIEGESHT 931 Query: 1564 KGSGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPGAITGGR 1623 L S + L + G + + R G G R Sbjct: 932 PELFRQLAKRLGRSGAKTTTLDFAGEAGY---QAHVRDFARRRGIDTLAGIVAGTGAGAR 988 Query: 1624 VWGDIPDNSVQPGAGNGEPVTAEVLAQRQAEEAIRRETER--RADEIVRKMAENKPDLPD 1681 Q A E A + E + + R + Sbjct: 989 RQLAWLSQKRQQVAMLWERAGAALGLAIDRERRVSYHERQSGRFPMQNPTAPMSLDRNSP 1048 Query: 1682 GKTEQAVREIAGQERDRAAITEREAALPEGVLREPQRVREAVREIARENLLQERLQQMER 1741 G + + GQ I AA+ E RE + A + L + Sbjct: 1049 GSSRTRPTDNIGQGSKACNIPPLLAAVTEFTTPVEVEARERASKAALHVHNRSLLAETAM 1108 Query: 1742 DMVRDL 1747 + R+ Sbjct: 1109 RIWREP 1114 Score = 184 bits (465), Expect = 4e-44, Method: Composition-based stats. Identities = 74/658 (11%), Positives = 174/658 (26%), Gaps = 92/658 (13%) Query: 244 AVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRAD--- 300 G ++K+ +A T + + E G D A R ++ Sbjct: 190 WAGNRETMKAWKIAWAQTASRYLALAGRDIRLDGRSH-AEQGLDGIAQRHLGPGKSAMMR 248 Query: 301 ------LRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVI 354 + + + L + F D+ AR + + Sbjct: 249 KGVEMYFAPADLARRRKMTARLLADPEPLLRQLGNERSTFDEKDI-ARVIHRYVDDPADF 307 Query: 355 ERARAGIDEAISREQLIPLDR-----------------------EKGLFTSGIHVLDELS 391 RA ++ L+ L E +FT+ + E + Sbjct: 308 ANIRA---RLMASPDLVLLKPQQSGALTDPIKGRVNGRVKGEATEPAIFTTRKILRTEHN 364 Query: 392 VRALSRDIMKQNR---------------VTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIV 436 + + + + +P K +A+ + +A V Sbjct: 365 MMRSADILSGRKGFGISDAGRAAALRFVEEDNPLKPFRLDLEQIEAIQHV-TGDSGIAAV 423 Query: 437 SGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRR--QLL 494 G G G+ +A + V A ++ +++ + + Sbjct: 424 VGLAG-TGKSTLLAAARLAWESGHHRVLGAALSGKAAEGLEESSAIRSRTLAAWEHAWNN 482 Query: 495 EGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSG---QRTGTGSALMAMK 551 G +++D+ +S + +LD + +V++ Q G G+A A+ Sbjct: 483 GRDQLMRGDILVIDEAGMVSSLQMARVLDAVEKAGAKVVLVGDAMQLQPIGAGAAFRAIS 542 Query: 552 DAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILT 611 + +++ G ++ A D + G+ + R ++ Sbjct: 543 ER-ISSAELAGVRRQQDEW-------------ARDASKLFARGDTAAGLEIYARRGHLVE 588 Query: 612 QAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVI 671 R L + V + ++P +PG + N + ++ Sbjct: 589 AETRDALIGRLVRDWTDARRKLITPS-------QTGRGVQPGTGIAAPNGGGQLPGDALL 641 Query: 672 DRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGK-------- 723 L +A + + + A G+R+ Sbjct: 642 VLAHTNRDVHRLNEALRKVMREEGALDGARRFRTERGMREFAAGDRIIFLENARFLEPRA 701 Query: 724 --IPGLRVSGGDRLQVASVSEDAMTVVVPGRAE-PATLPVSDSPFTALKLENGWVETPGH 780 V G V S ++ R + + +S+ + + Sbjct: 702 RGNRPQYVRNGMFGTVVSTGNAFRAPLLSVRLDSGNEIVLSEDSYRNIDHGYAVTIHKSQ 761 Query: 781 SVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSE 838 + T+ + + M + T + R LY++ ++ R + + Sbjct: 762 GATVDRTLVLA-SGMMDRHLTCVSMTRHRHRADLYAAREDFRPEREDRSRIDYAKGIT 818 >UniRef50_D1N1Q4 Exodeoxyribonuclease V, alpha subunit n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N1Q4_9BACT Length = 635 Score = 218 bits (555), Expect = 2e-54, Method: Composition-based stats. Identities = 82/611 (13%), Positives = 164/611 (26%), Gaps = 93/611 (15%) Query: 896 AEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVM 955 E L ++ D + G L + E + + ++ Sbjct: 86 LERLSAPALAAAVSRYPACRDAGFPTPLAIDDAGRLYLQRYLVYELQVAQAVMHRARRPE 145 Query: 956 PLMERVPGELMEKL-----------TSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRA 1004 E PG QR A FTV+ G G GKTT A Sbjct: 146 HPPELPPGAFDALFINYRNGAAEDRPDFQRLAALAAASRD--FTVISGGPGTGKTTVVAA 203 Query: 1005 VMSAVNMLPESERPRVVGLGPTHRAVGEMRSA---------GVDA----------QTLAS 1045 +++ + RV PT +A + A +A T+ Sbjct: 204 LLAL--EFARAPELRVALCAPTGKAQARLGEALREDGLKIGTAEAIRRRILELAPSTIDR 261 Query: 1046 FLHDTQ--LQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQL 1103 + + + L ++DESSMV MAR +A R + GD +QL Sbjct: 262 LIGSAPLTHRTKYHAGNPLPFDLVIVDESSMVSLPLMARLMQALAPE-TRLILLGDPNQL 320 Query: 1104 QAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQV 1163 ++ G + + +REA L + Sbjct: 321 ASVESGAVLADICDSGKRNA--------FSGAIREA--------------YLRQSPGVFL 358 Query: 1164 PRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEA 1223 + A ++ E +H+ A A + + D + D+ Sbjct: 359 AEPDDARPLTGALAELTHNFRFDTAPAIGEVSSAIKLLQDGATPEKIEGLTDFIHHQQND 418 Query: 1224 REQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETH 1283 +T+ VT R L++ + + + + L Sbjct: 419 DFRTIAVT-----RDQLSARLRQELARELPGKRGCFLRLAELAEAGTAEALTEAFGLLNA 473 Query: 1284 RDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGD 1343 L V + +++ + ++ + Sbjct: 474 FKVLAAVRRGPFGVEELNRLIRELFHWKSDDTPGM------------------------- 508 Query: 1344 RMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAH 1403 + +DR G + S + E + +H + +A+T H Sbjct: 509 PVMILANDRLTGLSNGDIGLFWKDLAGSGAIRIYFPGFERSFLAAELPEH-EPVFAMTIH 567 Query: 1404 GAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQK 1463 +QG+ + A+ + + E Y ++R + V +++ + ++ Sbjct: 568 KSQGSGFSRALLVLPD--GDSPVLTRELLYTGITRASKEVVLWST-PAVTRLMLERRTRR 624 Query: 1464 GTAHDVFEPKP 1474 + + Sbjct: 625 ASGLQARLAEA 635 Score = 123 bits (307), Expect = 7e-26, Method: Composition-based stats. Identities = 75/513 (14%), Positives = 145/513 (28%), Gaps = 69/513 (13%) Query: 371 IPLDREKGLFTSGIHVLDELSVRALS--RDIMKQNRVTVHPEKSVPRTAGYSDAVSV--- 425 + +D L+ +++ EL V R ++ + P Y + + Sbjct: 113 LAIDDAGRLYL-QRYLVYELQVAQAVMHRARRPEHPPELPPGAFDALFINYRNGAAEDRP 171 Query: 426 ------LAQDRPSLAIVSGQGGAAGQRERVAELVMM--AREQGREVQIIAADRRSQMNMK 477 V G G+ VA L+ + AR V + A ++Q + Sbjct: 172 DFQRLAALAAASRDFTVISGGPGTGKTTVVAALLALEFARAPELRVALCAPTGKAQARLG 231 Query: 478 QDERLSG------------------ELITGRRQLLE--------GMAFTPGSTVIVDQGE 511 + R G I P VIVD+ Sbjct: 232 EALREDGLKIGTAEAIRRRILELAPSTIDRLIGSAPLTHRTKYHAGNPLPFDLVIVDESS 291 Query: 512 KLSLKETLTLLDGAARHNVQVLITDSGQR--TGTGSALMAMKDAGVNT-----YRWQGGE 564 +SL L+ A +L+ D Q +G+ L + D+G R Sbjct: 292 MVSLPLMARLMQALAPETRLILLGDPNQLASVESGAVLADICDSGKRNAFSGAIREAYLR 351 Query: 565 QRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVL 624 Q P ++EPD L G A A G E + + ++ + + Sbjct: 352 QSPGVFLAEPDDA---RPLTGALAELTHNFRFDTAPAIG--EVSSAIKLLQDGATPEKIE 406 Query: 625 GLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRS--------HDRYVIDRVTA 676 GL + + + + R + + P R + + +T Sbjct: 407 GLTDFIHHQQNDDFRTIAVTRDQLSARLRQELARELPGKRGCFLRLAELAEAGTAEALTE 466 Query: 677 QSHSLTLRD-----AQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSG 731 L +G V ++ L ++ + G + + +S Sbjct: 467 AFGLLNAFKVLAAVRRGPFGVEELNRLIRELFHWKSDDT---PGMPVMILANDRLTGLSN 523 Query: 732 GDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFAS 791 GD + + + + ++ P ++ G S + V Sbjct: 524 GDIGLFWKDLAGSGAIRIYFPGFERSFLAAELPEHEPVFAMTIHKSQGSGFSRALLVLPD 583 Query: 792 VTQMAMDNA-TLNGLARSGRDVRLYSSLDETRT 823 + G+ R+ ++V L+S+ TR Sbjct: 584 GDSPVLTRELLYTGITRASKEVVLWSTPAVTRL 616 >UniRef50_Q140W3 Exodeoxyribonuclease V, alpha subunit n=3 Tax=Burkholderia RepID=Q140W3_BURXL Length = 704 Score = 217 bits (551), Expect = 4e-54, Method: Composition-based stats. Identities = 100/644 (15%), Positives = 184/644 (28%), Gaps = 61/644 (9%) Query: 871 ALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGL 930 A + + L ++ AE L A + G G Sbjct: 63 ASRATAEGHVCVPLALLARRFEASGAEVR--AALFASGMASDGSQSAAALRPLVVDGQGR 120 Query: 931 LVSRASYEAEKSILRHILEGKEAVMPLMERVPGELM---EKLTS---------------G 972 L Y+ E+ + R ++ A + E + L Sbjct: 121 LYLARYYDYERRLARALVAHAGAGVGTRAAPGAEAGGNAQTLHERLLRYFGTPKDNEVDW 180 Query: 973 QRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGE 1032 QR A M L + T+V G G GKTT V++ + R+ PT +A Sbjct: 181 QRVAAVMALSG--QLTIVSGGPGTGKTTTVVGVLACLLDARAD--LRIALGAPTGKAAQR 236 Query: 1033 MRSAGV----------------DAQTLASFLHDTQL-QQRSGETPDFSNTLFLLDESSMV 1075 M+ A + + TL L + R + ++DE+SM+ Sbjct: 237 MQEALLARAGDLPPELAARLPQTSYTLHRLLGSGPGGRFRHHRDNPLPYDVVVIDEASMI 296 Query: 1076 GNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPE 1135 A +A R V GD DQL A+ G F R A +E VR+ E Sbjct: 297 DVAMAAHLLDALAP-QTRLVMLGDKDQLAAVEAGAVFAELSARPAFT----QEGVRRLAE 351 Query: 1136 LREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAM 1195 + + + + A L + P+ E + ++ + A Sbjct: 352 ALGIDETRLTQALPHASRSLGEEQAGSFPQSNAPHGFEARPDDLFAYADSPEVFNEPLAG 411 Query: 1196 LKGEAFPDVPMTLYEAIVRD-----YTGRTPEAREQTLI----VTHLNEDRRVLNSMIHD 1246 E P A+ + R ++ I + N ++ Sbjct: 412 ELSEGAASSPGPAPHALNPLADCVVWLERNYRFGLESPIGRLSLAIRNGSSSAALDVLRI 471 Query: 1247 VREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGL 1306 ++ + L + + AL + + Sbjct: 472 DPAESCAAALYEDTHATLAERTVARLAAGFAPYADALAAALAADTPDPLPLFDALNRFRI 531 Query: 1307 ITLQDAEGNTRLI---SPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWT 1363 + + + V + + G + T++D G + Sbjct: 532 LCATRSGPRGVDQVNAAMAAQVRRSAGVTLAVGAQWFAGRPVMVTRNDYALGLFNGDIGI 591 Query: 1364 VTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNR 1423 + ++ + +R A D A+A+T H +QG+ A+ + Sbjct: 592 ALPGASGALRVHFRTGDGGLRAVSPAALPPHDTAFALTVHKSQGSEFEHAVLMLP--SAF 649 Query: 1424 KLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAH 1467 + E Y A++R ++ V+V R AI Q+ + Sbjct: 650 SRVLSRELVYTAITRARERVEVV-GARAVLAQAIATPTQRDSGL 692 Score = 71.2 bits (172), Expect = 4e-10, Method: Composition-based stats. Identities = 41/331 (12%), Positives = 85/331 (25%), Gaps = 44/331 (13%) Query: 290 AYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPP 349 A + +R G +++ + A +E V + R Sbjct: 30 ALAEGFARRIGTLARRGGASAEAVKWAARGAFAASRATAEGHVCVPLALLARRFEASGAE 89 Query: 350 ENGVIERARAGIDEAISREQLIPL--DREKGLFTSGIH---VLDELSVRALSRDIMKQNR 404 + + D + S L PL D + L+ + + ++ A + + Sbjct: 90 VRAALFASGMASDGSQSAAALRPLVVDGQGRLYLARYYDYERRLARALVAHAGAGVGTRA 149 Query: 405 VTVHPEKSVPRTAGYS---------------DAVSVLAQDRPSLAIVSGQGGAAGQRERV 449 +T V+ + L IVSG G V Sbjct: 150 APGAEAGGNAQTLHERLLRYFGTPKDNEVDWQRVAAVMALSGQLTIVSGGPGTGKTTTVV 209 Query: 450 AELVMMARE-QGREVQIIAADRRSQMNMKQDERLSG---------------ELITGRRQL 493 L + + + A ++ M++ + Sbjct: 210 GVLACLLDARADLRIALGAPTGKAAQRMQEALLARAGDLPPELAARLPQTSYTLHRLLGS 269 Query: 494 LEGMAFT-------PGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSA 546 G F P V++D+ + + LLD A ++++ + A Sbjct: 270 GPGGRFRHHRDNPLPYDVVVIDEASMIDVAMAAHLLDALAPQT-RLVMLGDKDQLAAVEA 328 Query: 547 LMAMKDAGVNTYRWQGGEQRPATIISEPDRN 577 + Q G +R A + + Sbjct: 329 GAVFAELSARPAFTQEGVRRLAEALGIDETR 359 Score = 51.5 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 15/145 (10%), Positives = 32/145 (22%), Gaps = 4/145 (2%) Query: 704 LFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDS 763 + G + VT L + GD +A V + VS + Sbjct: 559 VTLAVGAQWFAGRPVMVTRNDYALGLFNGDIG-IALPGASGALRVHFRTGDGGLRAVSPA 617 Query: 764 PFTALKLENGWVETPGHSVSDSATVFA---SVTQMAMDNATLNGLARSGRDVRLYSSLDE 820 V + +++ + R+ V + + Sbjct: 618 ALPPHDTAFALTVHKSQGSEFEHAVLMLPSAFSRVLSRELVYTAITRARERVEVVGARAV 677 Query: 821 TRTAEKLARHPSFTVVSEQIKTRAG 845 A + + + G Sbjct: 678 LAQAIATPTQRDSGLAARIAEAWHG 702 >UniRef50_B2A8J3 Helicase, RecD/TraA family n=2 Tax=Clostridia RepID=B2A8J3_NATTJ Length = 726 Score = 216 bits (549), Expect = 6e-54, Method: Composition-based stats. Identities = 83/664 (12%), Positives = 183/664 (27%), Gaps = 103/664 (15%) Query: 736 QVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQM 795 + + E V G+ + A + +K +++ G S + + ++ Sbjct: 114 VIENTPEKLQEVPGIGKEKAAQISRGFQEHKQIKDIMVFLQEFGVSPAFALKIYRRFGDN 173 Query: 796 AMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISH 855 + + N + + +V + A ++ Sbjct: 174 TIQKVSENPYSLAR-EVFGIGFKTADKIAREMGVSV------------------------ 208 Query: 856 QKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRG 915 A+ A+ L F + L EA + + Sbjct: 209 ---DSEERAKAAVVYLLEEKSQDGNTFLKREELIEALK----ELEVENVNLNSVLEELVE 261 Query: 916 DLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQRA 975 + V L+ + AE+ I + K+ V + ++ EK Q Sbjct: 262 EKEIVVENIPEAGELIYPAPFFFAEQGIASRLKRLKDGVDRELFPRIQKIAEKYLEEQAN 321 Query: 976 ATRMILETSDRFTVVQGYAGVGKTTQF----------RAVMSAVNMLPESERPRVVGLGP 1025 + ++ V++ G V+ + + + +V+ P Sbjct: 322 LVL----SPEQHQVIKQVPETG---LMVVTGGPGTGKTTVIKCLMDIFQKAGQKVMLAAP 374 Query: 1026 THRAVGEMRSA-GVDAQTLASFLH-----DTQLQQRSGETPDFSNTLFLLDESSMVGNTD 1079 T RA M A G +A+T+ L + ++ + + L ++DE+SM+ Sbjct: 375 TGRAAKRMSEATGDEAKTIHRLLEFTYDKEEGMKFQRNQDRPLKGDLLIVDEASMIDTIL 434 Query: 1080 MARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREA 1139 M I+ G R V GDTDQL ++ G + + +K + RQ E Sbjct: 435 MNNLLKAISP-GTRLVLVGDTDQLPSVGAGNVLQDIIESGRIPLVRLKRVFRQARESMVV 493 Query: 1140 VYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGE 1199 V + + + + + +PR+E + ++ + Sbjct: 494 VNAHRINEGKFPILNAKGKDFYFLPREEPEDVVKTIISLCAKRLPNYNGYHP-------- 545 Query: 1200 AFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQV 1259 V D +P R T LN + V + E Sbjct: 546 -------------VNDIQVLSPMRRTVT--------GVENLNQSLQKVLNPPQKNKAEIN 584 Query: 1260 MVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGN---- 1315 + +++ + + + + + ++ ++ ++ G Sbjct: 585 FGGACYRTGDKVMQVK-------NDYEKNVFNGDTGIVTKVDAEENVVNVRYGHGEEIAY 637 Query: 1316 --TRLISPREAVAEGVTLYTPDTIRVG-----TGDRMRFTKSDRERGYVANSVWTVTAVS 1368 L + A V V T + ++ V + Sbjct: 638 EGRELDALVHAYCISVHKSQGSEYPVVVLPVTTQHYIMLQRNLLYTAVTRAKSLVVLVGT 697 Query: 1369 GDSV 1372 S+ Sbjct: 698 KKSI 701 Score = 193 bits (489), Expect = 6e-47, Method: Composition-based stats. Identities = 92/642 (14%), Positives = 174/642 (27%), Gaps = 86/642 (13%) Query: 194 IAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVEAFSGRSQTIREAVGEDASLKS 253 G E L E + + E+PG+ E + I E +K Sbjct: 93 KGIGPKTAESLVEHFGKEVLQVIENTPEKLQEVPGIGKEK----AAQISRGFQEHKQIKD 148 Query: 254 RDV----------AALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRT 303 V AL + + +E + AD Sbjct: 149 IMVFLQEFGVSPAFALKIYRRFGDNTIQKVSENPYSLARE-------VFGIGFKTADKIA 201 Query: 304 LTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDE 363 G + + AV + S+ F + L + L EN + + E Sbjct: 202 REMGVSVDSEERAKAAVVYLLEEKSQDGNTFLKREELIEALKELEVENVNLNSVLEELVE 261 Query: 364 AISREQL-IPLDREKGL----FTSGIHVLDELSVRALSRDI------MKQNRVTVHPEKS 412 IP E F + + L D K + + + Sbjct: 262 EKEIVVENIPEAGELIYPAPFFFAEQGIASRLKRLKDGVDRELFPRIQKIAEKYLEEQAN 321 Query: 413 VPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRS 472 + + + + + + G + L+ + ++ G++V + A R+ Sbjct: 322 LVLSPEQHQVIKQVPETGLMVVTGGPGTGKT---TVIKCLMDIFQKAGQKVMLAAPTGRA 378 Query: 473 QMNMKQDERLSGELITGRRQL-----------LEGMAFTPGSTVIVDQGEKLSLKETLTL 521 M + + I + G +IVD+ + L Sbjct: 379 AKRMSEATGDEAKTIHRLLEFTYDKEEGMKFQRNQDRPLKGDLLIVDEASMIDTILMNNL 438 Query: 522 LDGAARHNVQVLITDSGQR--TGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVR 579 L + VL+ D+ Q G G+ L + ++G R A R Sbjct: 439 LKAISPGTRLVLVGDTDQLPSVGAGNVLQDIIESGRIPLVRLKRVFRQARESMVVVNAHR 498 Query: 580 Y--------ARLAGDFAASVKAGEESVAQV---------------SGVREQAILTQAIRS 616 DF + E V + V + +L+ R+ Sbjct: 499 INEGKFPILNAKGKDFYFLPREEPEDVVKTIISLCAKRLPNYNGYHPVNDIQVLSPMRRT 558 Query: 617 ELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDM-YRPGMVMEQ----WNPETRSHDRYVI 671 GV L + L+P + YR G + Q + + D ++ Sbjct: 559 V---TGVENLNQSLQKVLNPPQKNKAEINFGGACYRTGDKVMQVKNDYEKNVFNGDTGIV 615 Query: 672 DRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLF----RPEKMPVADGERLRVTGKIPGL 727 +V A+ + + +R GE LD+ + + L VT + + Sbjct: 616 TKVDAEENVVNVRYGHGEEIAYEGRELDALVHAYCISVHKSQGSEYPVVVLPVTTQHYIM 675 Query: 728 RVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALK 769 L +V+ VV+ G + + +S+ Sbjct: 676 LQRN---LLYTAVTRAKSLVVLVGTKKSIGIAISNKKTDERN 714 Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats. Identities = 56/423 (13%), Positives = 116/423 (27%), Gaps = 39/423 (9%) Query: 1075 VGNTDMARAYALIAA---GGGRAVASGDTDQLQAI----APGQPFRLQQTRSAADVAI-- 1125 V R + V S +Q Q I G + I Sbjct: 300 VDRELFPRIQKIAEKYLEEQANLVLS--PEQHQVIKQVPETGLMVVTGGPGTGKTTVIKC 357 Query: 1126 MKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEA 1185 + +I ++ ++ + + + +S + + R + +F +Q+ Sbjct: 358 LMDIFQKAG--QKVMLAAPTGRAAKRMSEATGDEAKTIHRLLEFTYDKEEGMKFQRNQDR 415 Query: 1186 KLAEAQQKAMLKGEAFPDVPMTLYEAIVR----------DYTGRTPEAREQTLIVTHLNE 1235 L + L +AI D I+ Sbjct: 416 PLKGDLLIVDEASMIDTILMNNLLKAISPGTRLVLVGDTDQLPSVGAGNVLQDIIESGRI 475 Query: 1236 DRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVD---- 1291 L + RE + ++ N + + L E ++ Sbjct: 476 PLVRLKRVFRQARESMVVVNAHRINEGKFPILNAKGKDFYFLPREEPEDVVKTIISLCAK 535 Query: 1292 --NVYHRIAGISKDDGLITLQD-----AEGNTRLISPREAVAEGVTLYTPDTIRVGTGDR 1344 Y+ ++ L ++ N L + TGD+ Sbjct: 536 RLPNYNGYHPVNDIQVLSPMRRTVTGVENLNQSLQKVLNPPQKNKAEINFGGACYRTGDK 595 Query: 1345 MRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHG 1404 + K+D E+ VT V + ++ E + + + AY I+ H Sbjct: 596 VMQVKNDYEKNVFNGDTGIVTKVDAEENVVNVRYGHGEEIAYEGRELDALVHAYCISVHK 655 Query: 1405 AQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNA--VQ 1462 +QG+ + + +M Y A++R K V + ++ AI+N + Sbjct: 656 SQGSEYP--VVVLPVTTQHYIMLQRNLLYTAVTRAKSLVVLV-GTKKSIGIAISNKKTDE 712 Query: 1463 KGT 1465 + T Sbjct: 713 RNT 715 >UniRef50_P45158 Exodeoxyribonuclease V alpha chain n=19 Tax=Pasteurellaceae RepID=EX5A_HAEIN Length = 640 Score = 216 bits (549), Expect = 8e-54, Method: Composition-based stats. Identities = 106/694 (15%), Positives = 215/694 (30%), Gaps = 101/694 (14%) Query: 808 SGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQA 867 S + A+ +A T +E +K A + + + + + + Sbjct: 6 HKLKELRILSQGDYYFAKLIADKQCHTDYAEPVKNLAILLAALCSWRYTQGNTCSQLDRY 65 Query: 868 IHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYG 927 + L + + + D L E D + + Sbjct: 66 LEHNLFGLAYRT---TEEDYLAEIHEKIGYLPVEDWQNALCGHMAFTQDPVNQIAPMAFQ 122 Query: 928 TGLLVSRASYEAEKSILRHILE----------GKEAVMPLMERVPGELMEKLTSGQRAAT 977 G L +++ E I+++I + + +E+ E EK T Q+ A Sbjct: 123 FGALYFYRAWQDEYRIVQYIKNTLKKYRTLAFSYDEIHQKLEKYFPEKQEK-TDWQKVAV 181 Query: 978 RMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA- 1036 +++ F+++ G G GKTT ++ + L + + + + PT +A + + Sbjct: 182 ATAIKSP--FSIITGGPGTGKTTTVTRLLLVLQELFDCK-LHIKLVAPTGKAASRLEESI 238 Query: 1037 ----GV-----------------DAQTLASFLHDTQLQQ--RSGETPDFSNTLFLLDESS 1073 G A TL S L R + ++DE+S Sbjct: 239 KNALGFMQEKMNVSHSLFNAIPQKASTLHSLLGVNAFNDYTRYNSHNPLQLDVLVVDETS 298 Query: 1074 MVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQT 1133 M+ MA+ + R + GD QL ++ G + + V Q Sbjct: 299 MIDLPMMAKLINALKPE-TRLILLGDQAQLASVEAGAVLG-----------ELAQFVTQP 346 Query: 1134 PELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQK 1193 +A Y L + P ++ S S KL+E QK Sbjct: 347 YSHEQAAYLLATTGYK------VEGSDCSNPIRDCLCHLTESRRFDKDSGIGKLSEFIQK 400 Query: 1194 AMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGE 1253 D + L+ D+ + +N+ + + + Sbjct: 401 G------KADDSLELF-----DHYPQELHFNSLNDEGDAVNQVVKSAVENYRTFLKMLDD 449 Query: 1254 LGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAE 1313 L K+++ N I E + +++ + + + G+ + I L Sbjct: 450 LRKQKIDPNAKNEQGISYAE-----AIQVQFNSVRFLTALRNNNLGVENLNKEIAL---- 500 Query: 1314 GNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVT 1373 A+ E L+ + G + T++D + A Sbjct: 501 ----------ALREQKLLWFRNEQDWYIGKPIMITENDHNVRLYNGDIGLCLANGK---- 546 Query: 1374 LSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAY 1433 RE+ + A + A+ +T H +QG+ + + TE N + E + Sbjct: 547 --VWFGNREVLTNRIPAH---EPAFMMTIHKSQGSEFKHTVMVLPTEVN--PVLSRELVF 599 Query: 1434 VALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAH 1467 ++R K+ + V+ D + W AI V++ + Sbjct: 600 TGVTRAKKELTVFADEK-IWKTAIRQTVKRQSGL 632 Score = 104 bits (258), Expect = 4e-20, Method: Composition-based stats. Identities = 57/569 (10%), Positives = 150/569 (26%), Gaps = 67/569 (11%) Query: 315 DVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLD 374 + + + + GL+ R + Y + +G LP E+ Q+ P+ Sbjct: 61 QLDRYLEHNLFGLAYRTTEEDYLAEIHEKIGYLPVEDWQNALCGHMAFTQDPVNQIAPMA 120 Query: 375 REKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSV------------PRTAGYSDA 422 + G DE + ++ +K+ R + +T A Sbjct: 121 FQFGALYFYRAWQDEYRIVQYIKNTLKKYRTLAFSYDEIHQKLEKYFPEKQEKTDWQKVA 180 Query: 423 VSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDER- 481 V+ + S+ G R+ ++ + ++++A ++ +++ + Sbjct: 181 VATAIKSPFSIITGGPGTGKTTTVTRLLLVLQELFDCKLHIKLVAPTGKAASRLEESIKN 240 Query: 482 --------------------LSGELITGRRQLLEGMAFTPG--------STVIVDQGEKL 513 + + +T ++VD+ + Sbjct: 241 ALGFMQEKMNVSHSLFNAIPQKASTLHSLLGVNAFNDYTRYNSHNPLQLDVLVVDETSMI 300 Query: 514 SLKETLTLLDGAARHNVQVLITDSGQR--TGTGSALMAMKDAGVNTYRWQGGEQRPATII 571 L L++ +L+ D Q G+ L + Y + AT Sbjct: 301 DLPMMAKLINALKPETRLILLGDQAQLASVEAGAVLGELAQFVTQPYSHEQAAYLLATTG 360 Query: 572 SEPDRNVRYARLAGDFAASVKAGEE----------SVAQVSGVREQAILTQAIRSELKTQ 621 + + + + ++ Q + L EL Sbjct: 361 YKVEGSDCSNPIRDCLCHLTESRRFDKDSGIGKLSEFIQKGKADDSLELFDHYPQELHFN 420 Query: 622 GVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSL 681 + + + + R+ ++ + +V S Sbjct: 421 SLNDEGDAVNQVVKSAVENYRTFLKMLDDLRKQKIDPNAKNEQGISYAEAIQVQFNSVRF 480 Query: 682 TLRDAQGETQVVRISS-----LDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQ 736 V ++ L L+ + G+ + +T +R+ GD Sbjct: 481 LTALRNNNLGVENLNKEIALALREQKLLWFRNEQDWYIGKPIMITENDHNVRLYNGDIGL 540 Query: 737 VASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASV-TQM 795 + + + + P ++ G + V + + Sbjct: 541 CLANGK--------VWFGNREVLTNRIPAHEPAFMMTIHKSQGSEFKHTVMVLPTEVNPV 592 Query: 796 AMDNATLNGLARSGRDVRLYSSLDETRTA 824 G+ R+ +++ +++ +TA Sbjct: 593 LSRELVFTGVTRAKKELTVFADEKIWKTA 621 >UniRef50_Q2J7P7 Putative uncharacterized protein n=1 Tax=Frankia sp. CcI3 RepID=Q2J7P7_FRASC Length = 1520 Score = 216 bits (548), Expect = 1e-53, Method: Composition-based stats. Identities = 136/913 (14%), Positives = 253/913 (27%), Gaps = 131/913 (14%) Query: 77 RPGYDLTFSAPKSVSMMAMLGGDK---RLIDAHNQAVDFAVRQVEALASTRVMTDGQSET 133 GYD+T SAPKSVS++ G ++ + A + V+ + +E A+ + Sbjct: 237 VLGYDVTCSAPKSVSLLWAFGDEEIRRDVAAAMDAGVEAVLGYLERHATVGTVAG---RN 293 Query: 134 VLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH---NGEWKTLS-----SDKVGKTGF 185 + + H+ SR E LH H++V N T + + + ++ + Sbjct: 294 RPGVGVAAVSYPHEVSRSDEAHLHVHSIVVNATAVPDLDEQGRPVADEQGRGRVDWRALD 353 Query: 186 IENVYANQIAFGRLYREKLKEQV-EALGYETEVVGKHGMWEMPGVPVE---AFSGRSQTI 241 E ++ G + L+ ++ G V ++G+ E+ P + AFS R + Sbjct: 354 GEVFLSHVKTAGYVGAAALRHELSRRRGLAWGPV-RNGVAELAAFPAQLLAAFSTRHGEV 412 Query: 242 REAVGE------DASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAA 295 + + + A +R +K+ + + L G+ + R A Sbjct: 413 QAEYAQLVADGLTPGGVTEAAAQRGSRAAKKVLADAQVRRIQHERLTAAGWTPQRVRALA 472 Query: 296 DQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIE 355 + R G D+ AGL+E F V+ R + Sbjct: 473 APASRNRAPVDGEDLAGLCDLLTGP----AGLTEHDSTFDRRAVVRRVAAWAADR-LPAD 527 Query: 356 RARAGIDEAISREQLIPLDREKGL--------FTSGIHVLDELSVRALSRDIMKQNRVTV 407 D+ ++ +++ L +T+ + E ++ AL R + Sbjct: 528 EVDRLTDQVLADRRIVLLGHSAARARQQPEPVYTTQELLEVEDTLLALCRQGRVEAGAQP 587 Query: 408 HPE-------------------------------------------KSVPRTAGYSDAVS 424 +A V Sbjct: 588 RILVDPATLEAHLAAAQQRPSSDGPGGVGGEDGGGQGNGGQGSGGPSGPALSAEQITLVR 647 Query: 425 VLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSG 484 L + V G G +G+ E + L + G +V A R + ++G Sbjct: 648 RLLTSGDLVRPVVGPAG-SGKTEAMRLLTRIVHAGGGQVFAAAHGGRQTEELTGRIGVAG 706 Query: 485 ELITGRRQLLEGMA-----FTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQ 539 +++G LL+ + GS VIVD+ ++S ++ L A+R +++ Sbjct: 707 RVVSGWLTLLDHTEDPGRVWPAGSVVIVDEATQVSTRDAARLARYASRTGTVLILLGDPA 766 Query: 540 RTGTGSALMAMKDAGVNT--------YRWQGGEQRPATIISEPDRNVRYARLAGDFAASV 591 + G A +T Q G + A + Sbjct: 767 QLGAVGAGGWYAHLVASTPDVPALGSLHRQTGAALAPVRAALGALRAEGGASARKALELL 826 Query: 592 KAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYR 651 A S + L + ++ T+ P A P Sbjct: 827 AADGRIRLFDS----REALLAQVVNDWYTERTAPHPR---GATDPDSATDPGSVDGAGST 879 Query: 652 PGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQ---------------GETQVVRIS 696 G P R V R A H + R G ++ Sbjct: 880 EGDGWTAAGPGRRRSGGTVRPRPAAALHMMAERTRDVEILARAARDRLAADGTLTGPVLT 939 Query: 697 SLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASV-------SEDAMTVVV 749 + G L GK + G +V +V A+TV Sbjct: 940 VAGRDFQAGDEVITLTQTGHTLIPAGKPASAYIRTGTLGRVTAVHLDPDHPDRQALTVRF 999 Query: 750 PGRA------EPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLN 803 P + E T +D L S + Sbjct: 1000 PRKGSVRVPWEYLTHRFTDGRTGGLGYAYAITAAKAEGSSLPTARAVA-PDDTSRAGLYV 1058 Query: 804 GLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTP 863 L+R+ D+ Y A+ + L + + + ++ + P Sbjct: 1059 MLSRARTDLAAYVIRRADLEADLDEEDWLPVLRDPTGPLERFADHLAQSRTERLASEYDP 1118 Query: 864 AQQAIHLALPVVE 876 A H Sbjct: 1119 LAHAAHRLRRTHT 1131 Score = 164 bits (413), Expect = 4e-38, Method: Composition-based stats. Identities = 139/1000 (13%), Positives = 261/1000 (26%), Gaps = 118/1000 (11%) Query: 775 VETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFT 834 + + V A Q+ D T G+ + ++ A+ Sbjct: 399 AQLLAAFSTRHGEVQAEYAQLVADGLTPGGVTEAAAQRGSRAAKKVLADAQVRRIQHERL 458 Query: 835 VVSEQIKTRAGETSLETAISHQKSALHTPAQQA-IHLALPVVESKKLAFSMVDLLTEAKS 893 + R + + + A + + F ++ + Sbjct: 459 TAAGWTPQRVRALAAPASRNRAPVDGEDLAGLCDLLTGPAGLTEHDSTFDRRAVVRRVAA 518 Query: 894 FAAEGTGFTELGGEINAQIKRGDLLYVD----VAKGYGTGLLVSRASYEAEKSILRHILE 949 +AA+ E+ + + ++ + A+ + ++ E E ++L + Sbjct: 519 WAADRLPADEVDRLTDQVLADRRIVLLGHSAARARQQPEPVYTTQELLEVEDTLLALCRQ 578 Query: 950 GKEAV---------MPLMERVPGELMEK-------------------------------L 969 G+ +E ++ L Sbjct: 579 GRVEAGAQPRILVDPATLEAHLAAAQQRPSSDGPGGVGGEDGGGQGNGGQGSGGPSGPAL 638 Query: 970 TSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRA 1029 ++ Q R +L + D V G AG GKT R + + + +V R Sbjct: 639 SAEQITLVRRLLTSGDLVRPVVGPAGSGKTEAMR----LLTRIVHAGGGQVFAAAHGGRQ 694 Query: 1030 VGEMRSA-GVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIA 1088 E+ GV + ++ +L + G + ++ ++DE++ V D AR + Sbjct: 695 TEELTGRIGVAGRVVSGWLTLLDHTEDPGRV-WPAGSVVIVDEATQVSTRDAARLARYAS 753 Query: 1089 AGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPE----LREAVYSLI 1144 G + GD QL A+ G + + DV + + RQT +R A+ +L Sbjct: 754 RTGTVLILLGDPAQLGAVGAGGWYAHLVAST-PDVPALGSLHRQTGAALAPVRAALGALR 812 Query: 1145 NRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDV 1204 A LE + R + + E + P Sbjct: 813 AEGGASARKALELLAADGRIRLFDSREALLAQVVNDWYTERTAPHPRGATDPDSATDPGS 872 Query: 1205 PMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDR-RVLNSMIHDVREKAGELGKEQVMVPV 1263 +T P R V ++ DV A Sbjct: 873 VDGAGSTEGDGWTAAGPGRRRSGGTVRPRPAAALHMMAERTRDVEILARAARDRLAADGT 932 Query: 1264 LNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPRE 1323 L + + +D + +I+ + Sbjct: 933 LTGPVLT------------------------------------VAGRDFQAGDEVITLTQ 956 Query: 1324 AVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREI 1383 + P + + TG R T + + TV SV + T Sbjct: 957 TGHTLIPAGKPASAYIRTGTLGRVTAVHLDPDHPDRQALTVRFPRKGSVRVPWEYLTHRF 1016 Query: 1384 RPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHV 1443 G+ + AYAITA A+G+S A A+ + YV LSR + + Sbjct: 1017 TDGRT---GGLGYAYAITAAKAEGSSLPTARAVAPDD------TSRAGLYVMLSRARTDL 1067 Query: 1444 QVYTDNRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAE-RLFSTARELRDVAAGRAVLR 1502 Y R ++ D P A+ R A E +A LR Sbjct: 1068 AAYVIRRADLEADLDEEDWLPVLRDPTGPLERFADHLAQSRTERLASEYDPLAHAAHRLR 1127 Query: 1503 QAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGEGR 1562 + G + P + A PA Sbjct: 1128 RTHTLAGLARLPAPPPSGGAHRAAGAPPAPPAPPAVLRRAELAAEAALRTAAVANPPADL 1187 Query: 1563 VKGSGDAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPGAITGG 1622 V A+ + + L D + + V G A T Sbjct: 1188 V-----ARIGPRPAAAGADRALWDRAVGALAVHHARYRPAVPPHDPGPPLSSGEPAGTLR 1242 Query: 1623 RVWGDIPDNSVQPGAGNGEPVTAEVLAQRQAEEAIRRETERRADEIVRKMAENKPDLPDG 1682 W D + + + + R RA++I R A Sbjct: 1243 ARWMLHHDQATRLARTWADVLP----------RRARARFHSRAEQIPRARAIAGLHALLD 1292 Query: 1683 KTEQAVREIAGQERDRAAITEREAALPEGVLREPQRVREA 1722 Q + R+ + AA+ + + + + + Sbjct: 1293 NGHQPADLLVALTREDQSSVRTGAAVLDHRVTDLCQQQGL 1332 >UniRef50_Q2BKD7 Exodeoxyribonuclease V alpha chain n=1 Tax=Neptuniibacter caesariensis RepID=Q2BKD7_9GAMM Length = 614 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 74/574 (12%), Positives = 154/574 (26%), Gaps = 101/574 (17%) Query: 926 YGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTS-------GQRAATR 978 + + +E E +I ++ + V + E + +L Q+ A Sbjct: 107 FDQERFYLKRYWEYESAIASQLINRAQTVDVDRA-LLKEGLAELFPMANQEIDWQKVAAA 165 Query: 979 MILETSDRFTVVQGYAGVGKTTQFRAVMSA--VNMLPESERPRVVGLGPTHRAVGEMRSA 1036 + ++ RF+V+ G G GKTT +++ S + + PT +A + + Sbjct: 166 VAVQ--KRFSVISGGPGTGKTTTVIKLLALYIAQAKAHSRNINIKLVAPTGKAAARLGES 223 Query: 1037 G------------------VDAQTLASFLHDTQL--QQRSGETPDFSNTLFLLDESSMVG 1076 A TL L + + + L +LDE+SMV Sbjct: 224 ISSAKQRLSLDADIAELIPEQAGTLHRLLGVIPNSIRFKHSQENPLHLDLLVLDEASMVD 283 Query: 1077 NTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPEL 1136 M R R + GD DQL ++ G + + +Q +L Sbjct: 284 LPMMCRLL-AALPAEARLILLGDRDQLASVEAGSVLGDICSWPG----QLDYGPKQADQL 338 Query: 1137 REAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAML 1196 + + + + + + + + + + KA Sbjct: 339 FDLCQLPEVLPISEGTPFADCLALLRKSYRFDESSGIGQLARAVNLGNKQAVSCVLKAGY 398 Query: 1197 KGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGK 1256 ++ YE L+++ L I L Sbjct: 399 SDLQQHNLSADSYE-----------------LMISETVNFHAKLLRDIAQGLTPEQSLD- 440 Query: 1257 EQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNT 1316 ++ L + Y + + + + Sbjct: 441 ----------------------YLSNYQLLCALREGPYGVVGLNDRIRQGLQSRGLIKEE 478 Query: 1317 RLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSD 1376 L P + + + + D V Sbjct: 479 GLWYPGRPIMITRNDQNLG--LFNGDIGIAYREPDGRIKVFFEQQGEV------------ 524 Query: 1377 GQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVAL 1436 R + P + Q + YA+T H +QG+ T L + E Y + Sbjct: 525 ----RSVLPSRLPEHQTV---YAMTVHKSQGSEFTRVALLLPPVD--SPLMTRELLYTGI 575 Query: 1437 SRMKQHVQVYTDNRQGWTDAINNAVQKGTAHDVF 1470 +R ++ + ++T + T A ++ + Sbjct: 576 TRARESLALFTT-KGILTAATERKTERAGGLALR 608 Score = 125 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 63/619 (10%), Positives = 167/619 (26%), Gaps = 65/619 (10%) Query: 272 IKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERK 331 I + W + D + + A+Q+ L A V L K Sbjct: 9 IDLKGWAENGLIRNVDFQFAKLVAEQKPSQPQLIYLAALVSFELASGNVCLPKLRLLSAK 68 Query: 332 VQFTYTDVLARTVGILPPENGVIERARAGIDEAISREQLIPLDRE---KGLFTSGIHVL- 387 + + + + E G E S L+ K + + Sbjct: 69 GYWDEE--IESVINQQDWSSLKAEAFILGQPELDSNTLLLFDQERFYLKRYWEYESAIAS 126 Query: 388 ---DELSVRALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAG 444 + + R ++K+ + P + A + + ++ G G Sbjct: 127 QLINRAQTVDVDRALLKEGLAELFPMANQEIDWQKVAAAVAVQKRFSVISGGPGTGKTTT 186 Query: 445 QRERVAELVMMAREQGREV--QIIAADRRSQMNMKQDER-----------------LSGE 485 + +A + A+ R + +++A ++ + + Sbjct: 187 VIKLLALYIAQAKAHSRNINIKLVAPTGKAAARLGESISSAKQRLSLDADIAELIPEQAG 246 Query: 486 LITGRRQLLE--------GMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDS 537 + ++ +++D+ + L LL +L+ D Sbjct: 247 TLHRLLGVIPNSIRFKHSQENPLHLDLLVLDEASMVDLPMMCRLLAALPAEARLILLGDR 306 Query: 538 GQR--TGTGSALMAM------KDAGVNTYRWQGGEQRPATIISEPDR---NVRYARLAGD 586 Q GS L + D G + ++ + A L Sbjct: 307 DQLASVEAGSVLGDICSWPGQLDYGPKQADQLFDLCQLPEVLPISEGTPFADCLALLRKS 366 Query: 587 FAASVKAGEESVAQVSGVREQAILTQAIRSE---LKTQGVLGLPEVTMTALSPVWLDSRS 643 + +G +A+ + + ++ +++ L+ + M + + + Sbjct: 367 YRFDESSGIGQLARAVNLGNKQAVSCVLKAGYSDLQQHNLSADSYELMISETVNFHAKLL 426 Query: 644 RYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWS 703 R + P ++ + ++ + + + + + + + Sbjct: 427 RDIAQGLTPEQSLDYLSNYQ------LLCALREGPYGVVGLNDRIRQGLQSRGLIK---- 476 Query: 704 LFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDS 763 E+ G + +T L + GD + + V + E ++ S Sbjct: 477 ----EEGLWYPGRPIMITRNDQNLGLFNGDIGIAYREPDGRIKVFFEQQGEVRSVLPSRL 532 Query: 764 PFTALKLENGWVETPGHSVSDSATVFAS-VTQMAMDNATLNGLARSGRDVRLYSSLDETR 822 P ++ G + A + + + G+ R+ + L+++ Sbjct: 533 PEHQTVYAMTVHKSQGSEFTRVALLLPPVDSPLMTRELLYTGITRARESLALFTTKGILT 592 Query: 823 TAEKLARHPSFTVVSEQIK 841 A + + + K Sbjct: 593 AATERKTERAGGLALRLWK 611 >UniRef50_D1N4L7 Conjugative relaxase domain protein n=2 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N4L7_9BACT Length = 295 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 80/289 (27%), Positives = 131/289 (45%), Gaps = 36/289 (12%) Query: 1 MMSIAQVRSAGSA-----GNYYTDKDNYYVLGSMGERWAGRGAEQLGLQGSV-DKDVFTR 54 M ++ ++R+ + N+ + D Y + W G A+ GL+ V + F+ Sbjct: 1 MFNMTKIRATNGSGKSFYANHLSSNDYYSEHEKVQGYWRGELADTFGLRDKVVTSEEFSL 60 Query: 55 LLEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRLIDAHNQAVDFAV 114 P ++ R +D +APKSVS+M+M D+RL++AH ++V A+ Sbjct: 61 FQRNVNPKTPGKLTQKNMPGGPR-FFDFQVAAPKSVSVMSMF--DERLVEAHRESVRIAM 117 Query: 115 RQVEALASTRVMTDGQSE---TVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQH-NG 170 ++E LA+ RV TG LV A F HDTSR +PQLHTH VV NVT+ +G Sbjct: 118 AELERLAAVRVRDGENVRTNNYETTGKLVYAEFMHDTSRALDPQLHTHNVVCNVTRAGDG 177 Query: 171 EWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYE-TEVVGKHGM---WEM 226 +K L + ++ + G++Y ++ + LGYE E + G +++ Sbjct: 178 RYKALETLEMCRAIR---------YAGKVYHNEMAARCRELGYETVETRDRKGNVIWYDL 228 Query: 227 PGVP---VEAFSGRSQTIR-------EAVGEDASLKSRDVAALDTRKSK 265 VP +E FS R + I G +L + + TR +K Sbjct: 229 ACVPADVMERFSKRRRQIEKAEAEFIAEHGRKPTLSENNYLSTSTRTNK 277 >UniRef50_C1MI09 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MI09_9CHLO Length = 1068 Score = 215 bits (546), Expect = 2e-53, Method: Composition-based stats. Identities = 116/809 (14%), Positives = 215/809 (26%), Gaps = 124/809 (15%) Query: 751 GRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGR 810 G L + + ++E G + + V A + + Sbjct: 330 GAKTAEKLKKNWDVTRGRRGATAFLEEHGVYPALAQRVAAKYGANTEEEVKKDPFEALYM 389 Query: 811 DVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHL 870 + A ++ + + + + Sbjct: 390 LRGATFHRADALAARLGKSADDPARLAAAMLQVLNVNASSEGHVYLHWREMRDG-----V 444 Query: 871 ALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGTGL 930 A + + L+ A A+ + A A G+ Sbjct: 445 ARLLGPKQAAGLQKGALVAAADELLAKKRINRIVAPAKGADEAASASDDEHDASWARYGV 504 Query: 931 LVSRASYEAE----KSILRHILEGKEAVM-PLMERVPGELMEK-----LTSGQRAATRMI 980 + Y+AE K I R + K A P + R E+ L+ Q A + Sbjct: 505 FAAV-LYDAEAHVAKDIARRLKMQKRAPDVPRVRRWLKAAAEREGWRLLSPAQEAFLDLA 563 Query: 981 LETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRS----- 1035 L + +V+ G G GKT L + +V+ PT RA + Sbjct: 564 L--REPISVLTGGPGTGKTFAV----HIAVRLWRAMGRKVLMCAPTGRAAQRLAEIASAG 617 Query: 1036 ----AGVDAQTLASFLHD----------------------TQLQQRSGETPDFSNTLFLL 1069 + V + T+ L + + + + ++ Sbjct: 618 RSMSSPVQSSTIHRLLEQRAGKRGGAGEEDDDPSDALEFAWKGKFARCKASPLDADVVVV 677 Query: 1070 DESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEI 1129 DESSM+ A + + V GD DQL ++ PG R A + E+ Sbjct: 678 DESSMLDLPLCAALLDAVKP-DAQVVFVGDADQLPSVGPGSVLRDVLQSRAVPAVQLSEV 736 Query: 1130 VRQTPE--LREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKL 1187 RQ + + A +S+ + + + S + Sbjct: 737 FRQAEQSGIIRAAHSMNAGRIPEVPTRRWDDATRTIVGPGPGGGGGSSSNANQSGPLSYQ 796 Query: 1188 AEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDV 1247 E + A P+ YE + A + T L + + Sbjct: 797 TETWEGADCVWVTVPEDGENAYEGALAALFDGALPALDGLNPTTDL-----QVLTPFRRG 851 Query: 1248 REKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLI 1307 +L + LN + E + D ++ N Y + + D G + Sbjct: 852 VASTSQL--NVFLQERLNPPSDGRLETKAGEITFREGDRVLQQRNDYVKEV-FNGDLGTV 908 Query: 1308 TLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAV 1367 + +G +V V Sbjct: 909 DAVNGDG------------------------------------------------SVRVV 920 Query: 1368 SGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMA 1427 G + + RE+ + + + + A+A+T H AQG+ + N + + Sbjct: 921 FGGAAAAAALVPAREVTYSRSE-LRDLLPAWALTVHKAQGSEYKAVVLCL--AENHRPLL 977 Query: 1428 GFESAYVALSRMKQHVQVYTDNRQGWTDAINN--AVQKGTAHDVFEPKPDREVMNAERLF 1485 E Y A SR K+ V V + A+ + T+ R + R Sbjct: 978 RRELVYTAASRAKE-VLVILSPERALRTAVQTVGNNSRNTSL------ARRLSPHGRRAP 1030 Query: 1486 STARELRDVAAGRAVLRQAGLAGGDSPAR 1514 S E AAG ++ A + R Sbjct: 1031 SCPSEAAIAAAGEVKAKREAAAAAAAAGR 1059 Score = 143 bits (360), Expect = 6e-32, Method: Composition-based stats. Identities = 101/773 (13%), Positives = 199/773 (25%), Gaps = 111/773 (14%) Query: 167 QHNGEWKT----------LSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYET- 215 + + +W T L+ G++ E+L A +E Sbjct: 255 RDDEKWGTQFVLNASPEELAPPTDEPAMLRYLSGGALPGCGKVTAERLVTHFGARTFEVL 314 Query: 216 -EVVGKHGMWEMPGVPVEAFSGRSQTIREAVGEDASLKSRDVAALDTRKSKQHVDPEIKM 274 + PGV + + G + + + Sbjct: 315 DSPDATRELTRCPGVGAKTAEKLKKNWDVTRGRRGATAFLEEH--GVYPALAQRVAAKYG 372 Query: 275 AEWMQTLKETGFD-IRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIA--GLSERK 331 A + +K+ F+ + R A RAD G ++ D + A+ Q + SE Sbjct: 373 ANTEEEVKKDPFEALYMLRGATFHRADALAARLGKSADDPARLAAAMLQVLNVNASSEGH 432 Query: 332 VQFTYTDVLARTVGILPPENGVIER---ARAGIDEAISREQLIPL--------------- 373 V + ++ +L P+ + A DE ++++++ + Sbjct: 433 VYLHWREMRDGVARLLGPKQAAGLQKGALVAAADELLAKKRINRIVAPAKGADEAASASD 492 Query: 374 DREKG-----------LFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVP-------R 415 D L+ + HV +++ R + K+ Sbjct: 493 DEHDASWARYGVFAAVLYDAEAHVAKDIARRLKMQKRAPDVPRVRRWLKAAAEREGWRLL 552 Query: 416 TAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMN 475 + + + R +++++G G G+ V V + R GR+V + A R+ Sbjct: 553 SPAQEAFLDLAL--REPISVLTGGPG-TGKTFAVHIAVRLWRAMGRKVLMCAPTGRAAQR 609 Query: 476 MKQ--------DERLSGELITGRRQLLEGMAFTPG------------------------- 502 + + + I + G G Sbjct: 610 LAEIASAGRSMSSPVQSSTIHRLLEQRAGKRGGAGEEDDDPSDALEFAWKGKFARCKASP 669 Query: 503 ---STVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR---TGTGSALMAMKDAGVN 556 V+VD+ L L LLD + QV+ + G GS L + + Sbjct: 670 LDADVVVVDESSMLDLPLCAALLDAVKP-DAQVVFVGDADQLPSVGPGSVLRDVLQSRAV 728 Query: 557 TYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRS 616 R A + + + + V + + + Sbjct: 729 PAVQLSEVFRQAEQSGIIRAAHSMNAGRIPEVPTRRWDDATRTIVGPGPGGGGGSSSNAN 788 Query: 617 ELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVID--RV 674 G L T VW+ + D + Sbjct: 789 ---QSGPLSYQTETWEGADCVWVTVPEDGENAYEGALAALFDGALPALDGLNPTTDLQVL 845 Query: 675 TAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDR 734 T + R++ + ++ +G+R+ V GD Sbjct: 846 TPFRRGVASTSQLNVFLQERLNPPSDGRLETKAGEITFREGDRVLQQRNDYVKEVFNGDL 905 Query: 735 LQVASVSEDAMTVVVPGRAE-------PATLPVSDSPFTALKLENGWVETPGHSVSDSAT 787 V +V+ D VV G A + S S L A Sbjct: 906 GTVDAVNGDGSVRVVFGGAAAAAALVPAREVTYSRSELRDLLPAWALTVHKAQGSEYKAV 965 Query: 788 VF---ASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVS 837 V + + +R+ + + S RTA + + S Sbjct: 966 VLCLAENHRPLLRRELVYTAASRAKEVLVILSPERALRTAVQTVGNNSRNTSL 1018 >UniRef50_Q036N8 ATP-dependent DNA helicase, RecD/TraA family n=9 Tax=Lactobacillus RepID=Q036N8_LACC3 Length = 860 Score = 214 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 104/681 (15%), Positives = 186/681 (27%), Gaps = 86/681 (12%) Query: 871 ALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRG-DLLYVDVAKGYGTG 929 A + + F + + + L G Sbjct: 232 AGLQYIFRTAVLTQGLTYITITWFRQQAATLLAVREADLKMFADPQEALQYGFLLNEQYG 291 Query: 930 LLVSRASYEAEKSILRHILEGKEAVMP---------LMERVPGELMEKLTSGQRAATRMI 980 L+ S + E S+ R I ++ P +++ + QRAA + + Sbjct: 292 LVTSCDMFATEGSVARIIKVAQKTAEPLMAPDELDDALDQFLDRFHLTINDQQRAAFQNV 351 Query: 981 LETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVD- 1039 +V+ G AG GKT ++ N +++ V L PT RA + + Sbjct: 352 --NHHGLSVLNGSAGTGKTWLTDLLVRFFN--AQAKGKSV-LLAPTGRAAKVLAKYTHEP 406 Query: 1040 AQTLASFLHDTQLQ---QRSGETPD---FSNTLFLLDESSMVGNTDMARAYALIAAGGGR 1093 A T+ ++LH + Q + L ++DESSM+ + Sbjct: 407 AATIHAYLHLLPGEETGQFDADADWETFGDARLIVVDESSMLTTPLAYTVLKNVNFKKAH 466 Query: 1094 AVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALS 1153 + GD QL I PG + + + RQ + + RD Sbjct: 467 VLFVGDVFQLPPIGPGNFLKDCLDDEQVAATTLTRVYRQDSQSGVLALANRIRD------ 520 Query: 1154 GLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIV 1213 + + + +V ++ ++ +A KA + IV Sbjct: 521 -----RLALPFGPDDDRYVSGNVALYNQRNAGRVFDAGVKAYQDALVKSGQQIDAQLLIV 575 Query: 1214 RDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGE 1273 G T G L + ++N A + E Sbjct: 576 NKNIGAT-------------------------------GRLRFNAELQALVNPAKNGEPE 604 Query: 1274 LRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYT 1333 L N I K L+ + E A Sbjct: 605 YISSYVDPVTNQKHHLRLNDRVMILKNDKHVPLVDPKT----------WERRAVLGENGL 654 Query: 1334 PDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQH 1393 T GT ++ + G V + + + + Sbjct: 655 QQTDDFGTKRWRETIVANGDTGV-------VAHIDTKRHFVVVQIGKQYCYYSFGSVPRD 707 Query: 1394 IDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGW 1453 + LAYAIT H AQG IA+ +M +S Y AL+R +Q + D R Sbjct: 708 LTLAYAITVHKAQGGQADTVIAIVN---GADMMLNAQSFYTALTRTQQQFIFFGDFRVLL 764 Query: 1454 TDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPA 1513 + HD+ ++ T ++ R R + ++ Sbjct: 765 ARTKIYPIDAR--HDLLGSFLSGQLTVDTFSRYTFDQVLAWLDKRHAERLSTRPALEAEE 822 Query: 1514 RFIAPGRKYPQPYVALPAFDR 1534 + + L D+ Sbjct: 823 VIPSEQPFAVRYAEQLDILDQ 843 Score = 142 bits (358), Expect = 9e-32, Method: Composition-based stats. Identities = 110/778 (14%), Positives = 211/778 (27%), Gaps = 51/778 (6%) Query: 174 TLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVEA 233 L + + I+ + +Q R E + L + +PG+ Sbjct: 91 GLPKEPRRQWQLIDTLLVHQPTVRRRLHEHFADDTPIL--TVFSTDQVKPDSVPGIGPAT 148 Query: 234 FSGRSQTIREAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRD 293 + IR + E A L + AL + ++ MQ++ + + + Sbjct: 149 IKKIATAIRGKL-EIAVLANHWGKALSSMTYEKIWLAYKDANLAMQSIDANPYLLMSVAQ 207 Query: 294 AADQRADLRTLTPGPASQDGPDVQQAVTQAIAG--LSERKVQFTYTDVLARTVGILPPEN 351 ++ D T G A+ D + + L++ T T + +L Sbjct: 208 LDFKKVDTFAKTRGIAANDPHRLTAGLQYIFRTAVLTQGLTYITITWFRQQAATLLAVRE 267 Query: 352 GVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEK 411 ++ EA+ L L+ + GL TS E SV + + K + P++ Sbjct: 268 ADLKMFADP-QEALQYGFL--LNEQYGLVTSCDMFATEGSVARIIKVAQKTAEPLMAPDE 324 Query: 412 ------------SVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQ 459 + A + + L++++G G G+ LV Q Sbjct: 325 LDDALDQFLDRFHLTINDQQRAAFQNV--NHHGLSVLNGSAG-TGKTWLTDLLVRFFNAQ 381 Query: 460 --GREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMA------------FTPGSTV 505 G+ V ++A R+ + + I LL G F + Sbjct: 382 AKGKSV-LLAPTGRAAKVLAKYTHEPAATIHAYLHLLPGEETGQFDADADWETFGDARLI 440 Query: 506 IVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR---TGTGSALMAMKDAGVNTYRWQG 562 +VD+ L+ T+L VL + G G+ L D Sbjct: 441 VVDESSMLTTPLAYTVLKNVNFKKAHVLFVGDVFQLPPIGPGNFLKDCLDDEQVAATTLT 500 Query: 563 GEQRPATIISEPDRNVRYA-RLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQ 621 R + R RLA F + R + A + Sbjct: 501 RVYRQDSQSGVLALANRIRDRLALPFGPDDDRYVSGNVALYNQRNAGRVFDAGVKAYQDA 560 Query: 622 GVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSL 681 V ++ L + LR ++ + +D VT Q H L Sbjct: 561 LVKSGQQIDAQLLIVNKNIGATGRLRFNAELQALVNPAKNGEPEYISSYVDPVTNQKHHL 620 Query: 682 TLRDA---QGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVA 738 L D + V + + + + + T + V+ GD VA Sbjct: 621 RLNDRVMILKNDKHVPLVDPKTWERRAVLGENGLQQTDDF-GTKRWRETIVANGDTGVVA 679 Query: 739 SVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSAT--VFASVTQMA 796 + VVV + P L L + M Sbjct: 680 HIDTKRHFVVVQIGKQYCYYSFGSVPRD-LTLAYAITVHKAQGGQADTVIAIVNGADMML 738 Query: 797 MDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQ 856 + L R+ + + K+ + + + + + Sbjct: 739 NAQSFYTALTRTQQQFIFFGDFRVLLARTKIYPIDARHDLLGSFLSGQLTVDTFSRYTFD 798 Query: 857 KSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKR 914 + + A L+ + A +A + ++ E+ R Sbjct: 799 QVLAWLDKRHAERLSTRPALEAEEVIPSEQ--PFAVRYAEQLDILDQIVDEVAQLPAR 854 >UniRef50_A7ABF9 Putative uncharacterized protein n=2 Tax=Bacteroidales RepID=A7ABF9_9PORP Length = 1171 Score = 213 bits (542), Expect = 5e-53, Method: Composition-based stats. Identities = 113/770 (14%), Positives = 221/770 (28%), Gaps = 125/770 (16%) Query: 726 GLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDS 785 + +V +A ++ +S + +++S+ Sbjct: 321 EQDLRNNGYCRVKDNPWEAFDKLMKD-------ELSLPDSVYKSELTHYRILWKNTLSNQ 373 Query: 786 ATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAG 845 V +++ +++ + S + + E L + Sbjct: 374 RQVLELLSRFEINSEVIKWWFDSPGCYDELLNNPYIISEESLIENYLPVTTEMIDLGIMA 433 Query: 846 ETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKS---FAAEGTGFT 902 + ++ + + +L + ++ + S D L A + + Sbjct: 434 DPKIQGKWTPKAPSLVESVIDNRRIRSFIISKLVASLSDGDTLISANEIELYIKDCLAAD 493 Query: 903 ELGGEINAQIKRGDLLYVDVAKGYGTGLL------------VSRASY--EAEKSILRHIL 948 N + + + R + A K + + Sbjct: 494 NHQLPYNYLMSNKEFIEEKTIYLNTDDRCALQLKEYKEIDDYLRKIFKGRASKDVKSPLK 553 Query: 949 EGKEAVMPLMERVPGELMEK---LTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAV 1005 E ++ E E+ + Q A M R +V+ G AG GKTT +A Sbjct: 554 EDWNTIVKASIDGYNEANERCRNAVADQVKALEMFCS--KRLSVLAGPAGTGKTTVVKAF 611 Query: 1006 MSAVNMLPESERPRVVGLGPTHRAVGEMR--SAGVDAQTLASFLHDTQLQQRSGETPDFS 1063 + + + E + L PT +A + SA + A T+A FL TP Sbjct: 612 LKSPQIKAEGT----LLLAPTGKARVRLGNMSADIQALTIAQFLTRQGFFDWDTMTPCVP 667 Query: 1064 NTL----------FLLDESSMVGNTDMARAYALIAAGGG-RAVASGDTDQLQAIAPGQPF 1112 ++DE SM+ D + R + GD QL I PG+PF Sbjct: 668 EDAEKRKYCGAKNVIIDECSMLTCKDFYVLMKALDLKNINRIILIGDPFQLPPIGPGRPF 727 Query: 1113 RLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAP 1172 + E +R V IN L+ L S + P + Sbjct: 728 ADLFNYLKDNK---DEYLRSAITKLRYVVRTINTGDSDILT-LASWFSGEKPAKNSDLIF 783 Query: 1173 EHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTH 1232 E K + D+ L EAI + E + Sbjct: 784 EQVA---------KGNLNNDLVVYTWNDENDLKDCLKEAIEK---ELPEEEGKS------ 825 Query: 1233 LNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDN 1292 L+ I +G + V + + + + + LS + +++ Sbjct: 826 -------LSDKIRK------SIGLDDVNKALNDP--SKVEKFQVLSPVKNPVWGTFQINS 870 Query: 1293 VYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDR 1352 + GI+K+ I + D++ K++R Sbjct: 871 YFQEWVGINKN--------------------------FSIEIAPITISALDKVIQLKNER 904 Query: 1353 ERG-------YVANSVWTV---TAVSGDSVTLSDGQQTREIRPG---QEQAEQHIDLAYA 1399 ++ + V S + G + ++A+ IDLAYA Sbjct: 905 KKSTSKEECQLSNGQIGFVNYANKREKKSTVVFTGLPNKRFSYYSSKSDEADNTIDLAYA 964 Query: 1400 ITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDN 1449 IT H +QG+ + + G + E Y AL+R ++ + + + Sbjct: 965 ITIHKSQGSDFDTVLVVLPKSG---RILSRELIYTALTRARKKLILLIQD 1011 Score = 121 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 59/490 (12%), Positives = 136/490 (27%), Gaps = 45/490 (9%) Query: 417 AGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNM 476 A A+ + L++++G G G+ V + + + ++A ++++ + Sbjct: 579 ADQVKALEMFCS--KRLSVLAGPAG-TGKTTVVKAFLKSPQIKAEGTLLLAPTGKARVRL 635 Query: 477 KQ-DERLSGELITGRRQLL----------------EGMAFTPGSTVIVDQGEKLSLKETL 519 + I E + VI+D+ L+ K+ Sbjct: 636 GNMSADIQALTIAQFLTRQGFFDWDTMTPCVPEDAEKRKYCGAKNVIIDECSMLTCKDFY 695 Query: 520 TLLDG--AARHNVQVLITDSGQR--TGTGSALMAM---KDAGVNTYRWQGGEQRPATIIS 572 L+ N +LI D Q G G + + Y + + + Sbjct: 696 VLMKALDLKNINRIILIGDPFQLPPIGPGRPFADLFNYLKDNKDEYLRSAITKLRYVVRT 755 Query: 573 EPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMT 632 + LA F+ A + S V + + + + L + Sbjct: 756 INTGDSDILTLASWFSGEKPA-KNSDLIFEQVAKGNLNNDLVVYTWNDENDL--KDCLKE 812 Query: 633 ALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQV 692 A+ + + L D R + ++ N + +V + + Q + Sbjct: 813 AIEKELPEEEGKSLSDKIRKSIGLDDVNKALNDPSKVEKFQVLSPVKNPVWGTFQINSYF 872 Query: 693 VRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGL-------RVSGGDRLQVASVS--ED 743 ++ ++S+ + ++ +++ ++S G V + E Sbjct: 873 QEWVGINKNFSI-EIAPITISALDKVIQLKNERKKSTSKEECQLSNGQIGFVNYANKREK 931 Query: 744 AMTVVVPGRAEPATLPV---SDSPFTALKLENGWVETPGHSVSDSA--TVFASVTQMAMD 798 TVV G SD + L V ++ Sbjct: 932 KSTVVFTGLPNKRFSYYSSKSDEADNTIDLAYAITIHKSQGSDFDTVLVVLPKSGRILSR 991 Query: 799 NATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKS 858 L R+ + + L + + E S + I + + Sbjct: 992 ELIYTALTRARKKLILLIQDNISWLIEYTKPQMSVLAKRNTNLFSTSVREDISNIPYVEG 1051 Query: 859 ALHTPAQQAI 868 +HT + + Sbjct: 1052 LIHTTLKPGL 1061 >UniRef50_C3QZL9 ATP-dependent exoDNAse n=20 Tax=Bacteroidales RepID=C3QZL9_9BACE Length = 472 Score = 213 bits (541), Expect = 5e-53, Method: Composition-based stats. Identities = 94/524 (17%), Positives = 173/524 (33%), Gaps = 92/524 (17%) Query: 954 VMPLMERVPGE-LMEKLTSGQRAATR-----MILETSDRFTVVQGYAGVGKTTQFRAVMS 1007 + +ER E + T Q A + ++ +D +++GYAG GKT+ A++ Sbjct: 2 INNYLERQIKENFPYQPTLEQEIAVKSLSKFLLSTLADEVFILRGYAGTGKTSLVGALVK 61 Query: 1008 AVNMLPESERPRVVGLGPTHRAVGEMRS-AGVDAQTLASFLHDTQLQ-----QRSGETPD 1061 ++ L + V L PT RA + AG A T+ ++ Q S Sbjct: 62 TMDQLQQKS----VLLAPTGRAAKVFSAYAGHPAFTIHKKIYRQQSFSNELSNFSINDNL 117 Query: 1062 FSNTLFLLDESSMVGN-----------TDMARAYALIAAG-GGRAVASGDTDQLQAIA-- 1107 +NTLF++DE+SM+ N + + +G G R + GDT QL + Sbjct: 118 ATNTLFIVDEASMISNEGLSGSMFGTGRLLDDLVQFVYSGQGCRLLLMGDTAQLPPVGEE 177 Query: 1108 -PGQPFRLQQTRSAADVAI--MKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVP 1164 F +V + ++VRQ E + Sbjct: 178 LSPALFADALKGYGLEVREIDLTQVVRQVQES-------------------------GIL 212 Query: 1165 RQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAR 1224 + + + K+ ++ G + Y+ + Sbjct: 213 WNATQLRQLIAEDDCYSLPKIKITGFPDIKLVPGIELIEELTNCYD----------HDGM 262 Query: 1225 EQTLIVTHLNEDRRVLNSMIHDVR-EKAGELGKEQVMVPVLNTANIRDGELRRLSTWETH 1283 ++T++V N+ + N+ I + EL +++ N E + Sbjct: 263 DETIVVCRSNKRANLYNNGIRAQILWREDELNTGDMLMIAKNNYYWT----------EKY 312 Query: 1284 RDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGD 1343 ++ + + + + + + + AE L P + E DT+ D Sbjct: 313 KEMDFIANGEIAVVRRVRRTREIYGFRFAE--VTLRFPDQNDFELDANLLLDTLH---SD 367 Query: 1344 RMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAH 1403 K D +R + +TV D D + + P + AYAIT H Sbjct: 368 SPALPKEDNDRLF-----YTVLEDYIDIPNKRDRMKKMKADP--HYNALQVKYAYAITCH 420 Query: 1404 GAQGASETFAIALEGTEGNRKLMAG-FESAYVALSRMKQHVQVY 1446 AQG +G + L F Y A +R + + + Sbjct: 421 KAQGGQWQNVFLDQGYMTDEYLTPDYFRWLYTAFTRATKTLYLV 464 Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats. Identities = 56/485 (11%), Positives = 119/485 (24%), Gaps = 104/485 (21%) Query: 412 SVPRTAGYSDAVS-----VLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQII 466 T AV +L+ + I+ G G G+ V LV + ++ ++ Sbjct: 15 PYQPTLEQEIAVKSLSKFLLSTLADEVFILRGYAG-TGKTSLVGALVKTMDQLQQKSVLL 73 Query: 467 AADRRSQMNMKQDERLSGELITGRRQLLEGM-----------AFTPGSTVIVDQGEKLSL 515 A R+ I + + + IVD+ +S Sbjct: 74 APTGRAAKVFSAYAGHPAFTIHKKIYRQQSFSNELSNFSINDNLATNTLFIVDEASMISN 133 Query: 516 -----------KETLTLLDGA-ARHNVQVLITDSGQRTGTG------SALMAMKDAGVNT 557 + L+ + ++L+ + + Sbjct: 134 EGLSGSMFGTGRLLDDLVQFVYSGQGCRLLLMGDTAQLPPVGEELSPALFADALKGYGLE 193 Query: 558 YRW----QGGEQRPATIISEPDRNVRYARLAGDFAASVK--------------------- 592 R Q Q + I +R D + K Sbjct: 194 VREIDLTQVVRQVQESGILWNATQLRQLIAEDDCYSLPKIKITGFPDIKLVPGIELIEEL 253 Query: 593 ------AGEESVAQVSGVREQAIL-TQAIRSE-LKTQGVLGLPEVTMTALSPVWLDSRSR 644 G + V ++A L IR++ L + L ++ M A + + + Sbjct: 254 TNCYDHDGMDETIVVCRSNKRANLYNNGIRAQILWREDELNTGDMLMIAKNNYYWTEK-- 311 Query: 645 YLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSL 704 Y+ + R + + +TLR + + L + Sbjct: 312 -----YKEMDFIANGEIAVVRRVRRTREIYGFRFAEVTLRFPDQNDFELDANLLLDTLH- 365 Query: 705 FRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSP 764 +P D +RL T + + + + +D Sbjct: 366 SDSPALPKEDNDRLFYTVLEDYIDIPN--------------------KRDRMKKMKADPH 405 Query: 765 FTALKLENGWVETPGHSVSDSATVFASVTQMAMD--------NATLNGLARSGRDVRLYS 816 + AL+++ + T + D R+ + + L + Sbjct: 406 YNALQVKYAYAITCHKAQGGQWQNVFLDQGYMTDEYLTPDYFRWLYTAFTRATKTLYLVN 465 Query: 817 SLDET 821 E Sbjct: 466 YPKEQ 470 >UniRef50_B1I2W6 Helicase, RecD/TraA family n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I2W6_DESAP Length = 688 Score = 212 bits (540), Expect = 7e-53, Method: Composition-based stats. Identities = 95/527 (18%), Positives = 165/527 (31%), Gaps = 36/527 (6%) Query: 704 LFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSE---------------DAMTVV 748 + + V +G+RL VTG G +L+V + + V Sbjct: 28 VALGDVAGVREGDRLTVTGS-WQEHPKYGRQLRVEHWEKPVPSTEEAAADFLSSGLIKGV 86 Query: 749 VPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARS 808 P AE + + +A+ + ++ + + + + + L R Sbjct: 87 GPVLAERIVSVLGPNAVSAILEDPDVLKKVKGIGKKAPEIRRQLQETYQVQQVVAELIRL 146 Query: 809 GRDVRLYSSLD---ETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQ 865 G ++ AE + R+P + I + A S+ A Sbjct: 147 GLTLKTAMKAYMKFGRPAAEYVRRNPYCLTELDLIGFHRADDIARRAGLAPDSSFRVKAG 206 Query: 866 QAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKG 925 L + + +L++ + + + ++ I +L + G Sbjct: 207 ILYVLNESLWDEGHAYLPRDELISRSLTLLN------HVEKSVSLDIVEKELSRLKGVHG 260 Query: 926 YGTGLLVSRASYEAE-KSILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETS 984 L YE E ++ + + V PL + +LT Q AA + LE+ Sbjct: 261 SAEVSLAWAREYEEEIARDVKRLARQRFDVPPLPRDLIR--GIELTPDQNAAVKTALESG 318 Query: 985 DRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRS-AGVDAQTL 1043 F+++ G GVGKT RAV+ A + V PT RA + G A T+ Sbjct: 319 --FSILTGGPGVGKTQTVRAVIRAFELQNPWGG--VFLCAPTGRAARRLSEVTGRQAHTV 374 Query: 1044 ASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQL 1103 L L +LDE+SM R + R + GD DQL Sbjct: 375 HKLLGLRNGHADRNRKNPLECDLLILDEASMACLVLTKRLLEAV-PNNARILFVGDADQL 433 Query: 1104 QAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQV 1163 ++ PG R + + EI RQ E + + + L + Sbjct: 434 PSVGPGNILRDLLDK--VPTVRLTEIFRQAAESQIVTNAHRINRGQMPLIDRSKTDFIFL 491 Query: 1164 PRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYE 1210 R++ + T S L M KG L + Sbjct: 492 EREDPEDIAKCVATCASGMGYDPLDVQVLSPMRKGPVGTAELNKLIQ 538 Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats. Identities = 75/672 (11%), Positives = 167/672 (24%), Gaps = 99/672 (14%) Query: 194 IAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVEAFSGRSQ-----TIREAVGED 248 G + E++ + + + ++ G+ +A R Q +++ V E Sbjct: 84 KGVGPVLAERIVSVLGPNAVSAILEDPDVLKKVKGIGKKAPEIRRQLQETYQVQQVVAEL 143 Query: 249 ASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGP 308 L A+ E + D A + + Sbjct: 144 IRLGLTLKTAMKAYMKFGRPAAEYVRRNPYCLTELDLIGFHRADDIARRAGLAPDSSFRV 203 Query: 309 ASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGIDEAISRE 368 + + +++ E ++++R++ +L + I + Sbjct: 204 KAGILYVLNESLWD------EGHAYLPRDELISRSLTLL-------NHVEKSVSLDIVEK 250 Query: 369 QLIPLDREKG------LFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYSDA 422 +L L G + V+ L+R + + + T + A Sbjct: 251 ELSRLKGVHGSAEVSLAWAREYEEEIARDVKRLARQRFDVPPLPRDLIRGIELTPDQNAA 310 Query: 423 VSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQG--REVQIIAADRRSQMNMKQDE 480 V + +I++G G G+ + V ++ Q V + A R+ + + Sbjct: 311 VKTALESG--FSILTGGPGV-GKTQTVRAVIRAFELQNPWGGVFLCAPTGRAARRLSEVT 367 Query: 481 RLSGELITGRRQLLE------GMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLI 534 + L +I+D+ L T LL+ +N ++L Sbjct: 368 GRQAHTVHKLLGLRNGHADRNRKNPLECDLLILDEASMACLVLTKRLLEAV-PNNARILF 426 Query: 535 TDSGQR---TGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASV 591 + G G+ L + D R A R + Sbjct: 427 VGDADQLPSVGPGNILRDLLDK--VPTVRLTEIFRQAAESQIVTNAHRI----NRGQMPL 480 Query: 592 KAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYR 651 ++ + + + + + +G + + LSP+ Sbjct: 481 IDRSKTDFIFLEREDPEDIAKCVAT---CASGMGYDPLDVQVLSPMRKGP---------- 527 Query: 652 PGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMP 711 TA+ + L G + Sbjct: 528 ---------------------VGTAELNKLIQGGMSGPRVKY--------------GQYV 552 Query: 712 VADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLE 771 G+++ T V GD + + +V + S L+ Sbjct: 553 FHVGDKVIHTKNNYDKGVFNGDIGIIKKIKMQHDVLVQYSSG---LVSYSGDDLRELEPA 609 Query: 772 NGWVETPGHSVSDSATVFASVTQ---MAMDNATLNGLARSGRDVRLYSSLDETRTAEKLA 828 A + T M N + R+ V L + A + Sbjct: 610 WAVTVHKAQGSEFKAVIIPVTTSHYVMLHRNLIYTAVTRAREKVILVGTKKALAIAVRNN 669 Query: 829 RHPSFTVVSEQI 840 + + Sbjct: 670 KPIQRYTALSGL 681 Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats. Identities = 53/393 (13%), Positives = 110/393 (27%), Gaps = 24/393 (6%) Query: 1100 TDQLQAIAPG--QPFRLQQTRSAA-DVAIMKEIVRQTPELREAVYSLINRDVERALSGLE 1156 DQ A+ F + ++ ++R + RA L Sbjct: 305 PDQNAAVKTALESGFSILTGGPGVGKTQTVRAVIRAFELQNPWGGVFLCAPTGRAARRLS 364 Query: 1157 SVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDY 1216 V Q + + +++ L A + L EA+ + Sbjct: 365 EVTGRQAHTVHKLLGLRNGHAD--RNRKNPLECDLLILDEASMACLVLTKRLLEAVPNNA 422 Query: 1217 TGRTPEAREQTLIVTHLNEDRR--------VLNSMIHDVREKAGELGKEQVMVPVLNTAN 1268 +Q V N R L + E ++ + + Sbjct: 423 RILFVGDADQLPSVGPGNILRDLLDKVPTVRLTEIFRQAAESQIVTNAHRINRGQMPLID 482 Query: 1269 IRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEG 1328 + L + A + G D + +G + + G Sbjct: 483 RSKTDFIFLEREDPEDIAKCVATCASGM--GYDPLDVQVLSPMRKGPVGTAELNKLIQGG 540 Query: 1329 VTLYTP--DTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPG 1386 ++ GD++ TK++ ++G + + + L + Sbjct: 541 MSGPRVKYGQYVFHVGDKVIHTKNNYDKGVFNGDIGIIKKIKMQHDVLVQYSSG--LVSY 598 Query: 1387 QEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVY 1446 + ++ A+A+T H AQG+ I T +M Y A++R ++ V + Sbjct: 599 SGDDLRELEPAWAVTVHKAQGSEFKAVIIPVTTS--HYVMLHRNLIYTAVTRAREKVILV 656 Query: 1447 TDNRQGWTDAINN--AVQKGTAHDVFEPKPDRE 1477 ++ A+ N +Q+ TA R Sbjct: 657 -GTKKALAIAVRNNKPIQRYTALSGLLRDAPRR 688 >UniRef50_B1VNB9 Putative exodeoxyribonuclease-like protein n=1 Tax=Streptomyces griseus subsp. griseus NBRC 13350 RepID=B1VNB9_STRGG Length = 1303 Score = 212 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 117/679 (17%), Positives = 198/679 (29%), Gaps = 89/679 (13%) Query: 915 GDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQR 974 L VD+A G L S A I + + ++ + + ++ SG Sbjct: 595 SQLRRVDLASGKAAYKLASAALRR--DFIRERLNQLRDGKPHCVPADLAKTLDTALSGLV 652 Query: 975 AATRMILETS--------------DRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRV 1020 AA LE R T+V G AG GKTT ++ A+ E R + Sbjct: 653 AAADSDLEARARVEKAAAFSEIFHRRVTIVNGPAGTGKTT----LIQALAKRSEVTRRGL 708 Query: 1021 VGLGPTHRAVGEMRSA-GVDAQTLASFL-HDTQLQQRSGETPDFSNT------LFLLDES 1072 + L PT +A ++ G A TLA FL H + G + ++DE+ Sbjct: 709 LLLAPTGKARVQLEQKVGYQALTLAQFLRHSDRYDDVHGRYLTLPDGRRISVGTVVVDEA 768 Query: 1073 SMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQ 1132 SM+ +A + R + GD QL I G+PF + R D R Sbjct: 769 SMLTEDMLAALLDAVE-ITERLILVGDPRQLPPIGAGRPFVDLERRRRPDH---SNWPRV 824 Query: 1133 TPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQ 1192 P E + R + + + + V E ++ Sbjct: 825 APGWAELTVLHRQQGHTR-----DDLALAHWYSGDKRSDDAEEVWEKLRTRAPMATLKAV 879 Query: 1193 KAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAG 1252 + A + E V D T T NE ++ R +A Sbjct: 880 HWNGRPAARVLDDVLREEFTVTDELSFTHSYGATTRTDAKGNEYPNYTHASGSCDRWQAL 939 Query: 1253 ELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDA 1312 + Q V ++ RR L+ + + + ++ + Sbjct: 940 SPTRGQTHGTVELNRYLKQTYRRRALADAQ------LIKSRRRVPQPLGPEQIVVGDKVV 993 Query: 1313 EGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGD-- 1370 + + K++ + VT Sbjct: 994 NTRNQYLRAYRPSTG---------------------KTEDRSYVANGELGVVTGQLKSKK 1032 Query: 1371 --------SVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGN 1422 V S R + ++LA+A+T H +QG+ + + Sbjct: 1033 MTGAPWQTQVEFSSQPDLRFAAQRGLDDDPGLELAWALTVHKSQGSEFGTVVLMLP---A 1089 Query: 1423 RKLMAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTA---HDVFEPKPDREVM 1479 E Y AL+R + V + + + TA D+ P V Sbjct: 1090 HVSGISRELLYTALTRQTRKVIICHEGPLEDLRELAQPTASDTARRLTDLTRPPEPVVVH 1149 Query: 1480 NAERLFS---TARELRDVAAGRAVLRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNG 1536 + + A + G V + + D R +Y QP R+G Sbjct: 1150 DRQGRRIGCFDANLIHITHFGLPVSSKNEVIIADLLHRLARGRFEYEQPLTG-----RDG 1204 Query: 1537 KSAGIWLNPLTTDDGNGLR 1555 K+ +TTDD + Sbjct: 1205 KTKFPDFT-ITTDDPDRPI 1222 Score = 139 bits (349), Expect = 1e-30, Method: Composition-based stats. Identities = 86/678 (12%), Positives = 177/678 (26%), Gaps = 92/678 (13%) Query: 280 TLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKV--QFTYT 337 +E G + A++ L P + +A+ ++ Sbjct: 538 RAQEEGHTLLPVEQMAERLGQLTVAVPLATDETILRPLGLAPEALLDSDSHDEPEVWSQL 597 Query: 338 DVLARTVGILPPENGVIERARAGIDEAISR-----EQLIPLDREKGLFTSGIHVLDELSV 392 + G + R I E +++ +P D K L T+ ++ Sbjct: 598 RRVDLASGKAAYKLASAALRRDFIRERLNQLRDGKPHCVPADLAKTLDTALSGLVAAADS 657 Query: 393 RALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAEL 452 +R +++ A + + IV+G G G+ + L Sbjct: 658 DLEARARVEK-------------------AAAFSEIFHRRVTIVNGPAG-TGKTTLIQAL 697 Query: 453 VMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPGS--------- 503 + R + ++A ++++ ++Q + + + G Sbjct: 698 AKRSEVTRRGLLLLAPTGKARVQLEQKVGYQALTLAQFLRHSDRYDDVHGRYLTLPDGRR 757 Query: 504 ----TVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR--TGTGSALMAMKDAGVNT 557 TV+VD+ L+ LLD +L+ D Q G G + ++ Sbjct: 758 ISVGTVVVDEASMLTEDMLAALLDAVEITERLILVGDPRQLPPIGAGRPFVDLERRRRPD 817 Query: 558 YRWQGGEQRPATIISEPDRNVRYAR----LAGDFAASVKAGEESVAQVSGVREQAILTQA 613 + ++ R + R LA ++ ++ + + + T+A Sbjct: 818 HSNWPRVAPGWAELTVLHRQQGHTRDDLALAHWYSGDKRSDDAEEVW------EKLRTRA 871 Query: 614 IRSELKTQGVLGLPEVTMT--ALSPVWLDSRSRYLRDMY-------RPGMVMEQWNPETR 664 + LK G P + L + + Y G + + Sbjct: 872 PMATLKAVHWNGRPAARVLDDVLREEFTVTDELSFTHSYGATTRTDAKGNEYPNYTHASG 931 Query: 665 SHDRYVIDRVTAQSHSLTLRDAQ------GETQVVRISSLDSSWSLFRP-EKMPVADGER 717 S DR+ T T+ + + + S + +P + G++ Sbjct: 932 SCDRWQALSPTRGQTHGTVELNRYLKQTYRRRALADAQLIKSRRRVPQPLGPEQIVVGDK 991 Query: 718 LRVTGKIP-------------GLRVSGGDRLQVASVSEDAMT--------VVVPGRAEPA 756 + T V+ G+ V + V + + Sbjct: 992 VVNTRNQYLRAYRPSTGKTEDRSYVANGELGVVTGQLKSKKMTGAPWQTQVEFSSQPDLR 1051 Query: 757 ---TLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVR 813 + D P L ++ G + + L R R V Sbjct: 1052 FAAQRGLDDDPGLELAWALTVHKSQGSEFGTVVLMLPAHVSGISRELLYTALTRQTRKVI 1111 Query: 814 LYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALP 873 + E S T TR E + ++ I Sbjct: 1112 ICHEGPLEDLRELAQPTASDTARRLTDLTRPPEPVVVHDRQGRRIGCFDANLIHITHFGL 1171 Query: 874 VVESKKLAFSMVDLLTEA 891 V SK L A Sbjct: 1172 PVSSKNEVIIADLLHRLA 1189 >UniRef50_C0VHS0 Exonuclease V alpha subunit n=7 Tax=Acinetobacter RepID=C0VHS0_9GAMM Length = 601 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 90/640 (14%), Positives = 179/640 (27%), Gaps = 96/640 (15%) Query: 850 ETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEIN 909 + + + + + + + +L + Sbjct: 27 DQSEQMTWINMWSRYLTQAPFSQSAQADSAAHVLQQLIEASLNGDSCIQVDLVQLEALGD 86 Query: 910 AQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKL 969 I Y L ++ E+ + + I K + P+++ E + + Sbjct: 87 LAIPSEKAATQVAPCVYDQQGLALYRYWQLEQRLAQQICRLKRQMTPVIDISEYESLLE- 145 Query: 970 TSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRA 1029 Q+AA +M+L+ +++ G G GKT +++A+N + R+ PT +A Sbjct: 146 DEFQQAALKMVLQ--QWVSIITGGPGTGKTYTLARIIAALNQMIPD--IRIAMAAPTGKA 201 Query: 1030 VGEMRSA---------------------GVDAQTLASFLH-DTQLQQRSGETPDFSNTLF 1067 M+ A QTL L + R + Sbjct: 202 AQRMQEALQNSFNDPKLIASGLVTDELRNQSTQTLHRLLGMGNRQIPRFNVKQPLPYDVI 261 Query: 1068 LLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMK 1127 ++DE+SM+ + + R + GD +QL ++ G Q + Sbjct: 262 VVDEASMLDLNLATALFEAV-PDSCRIILLGDANQLASVDVGSVLADLQQVEG-----LA 315 Query: 1128 EIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKL 1187 E Q R + R + ++ S + + E + E S S+E Sbjct: 316 ENRVQLQNSRRFSDKAKIGQLARFIQAQQASSESVLTQLEHEIVKPAPLQEMSLSKEMPD 375 Query: 1188 AEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDV 1247 A + + + + DY ++ + RV + Sbjct: 376 AIQLEYLPEQLDIEIEQYQQKLMYGFNDYAEILKSYLHADQPEQYIQDVIRVFDDYRILA 435 Query: 1248 REKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLI 1307 K G LG EQ+ N + ++ W R ++ ++ GIS D I Sbjct: 436 AVKHGALGIEQLNRYAERWLNQQLKQIAVAE-WYVGRPVMMTYND---YQLGISNGDIGI 491 Query: 1308 TLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAV 1367 + + ++ + + + R T+ Sbjct: 492 CFKHRTQAQQFEVFFPSLNKWIAAHR------------------LPRNMQTAFALTIHKS 533 Query: 1368 SGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMA 1427 G T H AI L + N K + Sbjct: 534 QGSEFT-----------------------------H--------TAIVL---DANAKKLL 553 Query: 1428 GFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAH 1467 E Y A++R K+ V + D A+ + + Sbjct: 554 SQELIYTAVTRAKKVVTLLAD-PNALLQALTVRTVRRSGL 592 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 63/560 (11%), Positives = 161/560 (28%), Gaps = 57/560 (10%) Query: 302 RTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLARTVGILPPENGVIERARAGI 361 T P S + Q I V +G L + E+A + Sbjct: 42 LTQAPFSQSAQADSAAHVLQQLIEASLNGDSCIQVDLVQLEALGDLAIPS---EKAATQV 98 Query: 362 DEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYSD 421 + +Q + L R + E + + +Q + + Sbjct: 99 APCVYDQQGLALYR---------YWQLEQRLAQQICRLKRQMTPVIDISEYESLLEDEFQ 149 Query: 422 AVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQ--GREVQIIAADRRSQMNMKQD 479 ++ + ++I++G G G+ +A ++ + + + A ++ M++ Sbjct: 150 QAALKMVLQQWVSIITGGPG-TGKTYTLARIIAALNQMIPDIRIAMAAPTGKAAQRMQEA 208 Query: 480 E--------------------RLSGELITGRRQLLEGM-------AFTPGSTVIVDQGEK 512 S + + + P ++VD+ Sbjct: 209 LQNSFNDPKLIASGLVTDELRNQSTQTLHRLLGMGNRQIPRFNVKQPLPYDVIVVDEASM 268 Query: 513 LSLKETLTLLDGAARHNVQVLITDSGQR--TGTGSALMAMKD-AGVNTYRWQGGEQRPAT 569 L L L + +L+ D+ Q GS L ++ G+ R Q R + Sbjct: 269 LDLNLATALFEAVPDSCRIILLGDANQLASVDVGSVLADLQQVEGLAENRVQLQNSRRFS 328 Query: 570 IISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEV 629 ++ + R+ + + SV E ++ L++ + ++ + + ++ Sbjct: 329 DKAKIGQLARFIQAQQASSESVLTQLEHEIVKPAPLQEMSLSKEMPDAIQLEYLPEQLDI 388 Query: 630 TMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGE 689 + + + Y +++ + + + + G Sbjct: 389 EIEQYQQKLMYGF-----NDYAE--ILKSYLHADQPEQYIQDVIRVFDDYRILAAVKHGA 441 Query: 690 TQVVRISSLDSSWSLFRPEKM---PVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMT 746 + +++ W + +++ G + +T L +S GD A Sbjct: 442 LGIEQLNRYAERWLNQQLKQIAVAEWYVGRPVMMTYNDYQLGISNGDIGICFKHRTQAQQ 501 Query: 747 VVVPGRAEPATLPVSDSPFT-ALKLENGWVETPGHSVSDSATVFASVTQMAMDNAT-LNG 804 V + + P ++ G + +A V + + + Sbjct: 502 FEVFFPSLNKWIAAHRLPRNMQTAFALTIHKSQGSEFTHTAIVLDANAKKLLSQELIYTA 561 Query: 805 LARSGRDVRLYSSLDETRTA 824 + R+ + V L + + A Sbjct: 562 VTRAKKVVTLLADPNALLQA 581 >UniRef50_D1A5Y8 Helicase, RecD/TraA family n=15 Tax=Bacteria RepID=D1A5Y8_THECD Length = 762 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 97/725 (13%), Positives = 199/725 (27%), Gaps = 95/725 (13%) Query: 643 SRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSW 702 R G + + E ++ + + +G Sbjct: 30 ERITFVNEETGYTIARIATERSGNELLTVVGPLHGAQVGESLRLRGRWTSHAKYGRQFQV 89 Query: 703 SLFRPEKMPVADGER----------LRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVP-G 751 F G R + T + G D L+V + +T V G Sbjct: 90 HSFTTVLPATVQGLRRYLGSGLIKGIGPTMAERMVDHFGTDILRVIEEEPERLTEVYGLG 149 Query: 752 RAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRD 811 + + A+K ++ G S S + ++ + A++ R D Sbjct: 150 PKRMRRIAEAWEEQKAIKEVMVFLSEVGVSTSLAVRIYKTYGDDAIEVVRKEPY-RLAAD 208 Query: 812 VRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLA 871 V A+ + + + + Sbjct: 209 VWGIGFKTADTIAQAVGIPHDSPERIKAGLRYTLSQAADAG------------------- 249 Query: 872 LPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGYGT--G 929 +LL+E ++G + + ++ V G Sbjct: 250 -------HCYLPEPNLLSETAKIL--QVDAEQVGPCLEELVAEEGVVRETVRTTGGNQVP 300 Query: 930 LLVSRASYEAE-----------KSILRHILE-GKEAVMPLMERVPGELMEKLTSGQRAAT 977 + Y AE + + G + + ++L QR A Sbjct: 301 AVYLLPFYRAECSLAAALLGLLRCDADRLAAFGDVDWEAALGWLARRTGQQLADEQRQAV 360 Query: 978 RMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRS-A 1036 ++ L + V+ G G GK+ R+V+ L ++++ V+ + PT RA + Sbjct: 361 QLALT--RKVAVLTGGPGCGKSFTVRSVVE----LAKAKKATVLLVAPTGRAAKRLAELT 414 Query: 1037 GVDAQTLASFLHDTQLQQ-RSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAV 1095 G +A T+ L + L ++DE SM+ + I G + Sbjct: 415 GHEASTVHRLLELQPGGDPKYDRDHPLQADLVVVDECSMLDLVLANKLVKAIPP-GAHLL 473 Query: 1096 ASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGL 1155 GD DQL ++ G+ R + +I RQ + V + Sbjct: 474 LVGDVDQLPSVGAGEVLRDLLAADVIPHVRLTKIFRQAQQSGIVVNAHKINAGRPP---- 529 Query: 1156 ESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRD 1215 ++T FS + E + + + + Sbjct: 530 -------------------ALTGFSDFFWFGCEPPADSGLNPAEETAKLVVDIVARRIPA 570 Query: 1216 YTGRTPEAREQTLIVTHLNE---DRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDG 1272 G P R ++T ++ LN+++ + E E+ + + Sbjct: 571 RFGLDP--RRDVQVLTPMHRGPAGAASLNALLQEALTPYREGVPERRHGGRVFRPGDKVT 628 Query: 1273 ELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLY 1332 +LR + ++ + + + + G+S +DG +T+ E T E Sbjct: 629 QLR--NNYDKGK--AGIFNGTVGVVTGLSLEDGTLTVVTDEDETVDYDFAELDELAHAYA 684 Query: 1333 TPDTI 1337 Sbjct: 685 VTIHR 689 Score = 166 bits (420), Expect = 7e-39, Method: Composition-based stats. Identities = 89/661 (13%), Positives = 180/661 (27%), Gaps = 102/661 (15%) Query: 194 IAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVEAFSGRSQTIREAVGEDASLKS 253 G E++ + + E+ G+ R + I EA E ++K Sbjct: 113 KGIGPTMAERMVDHFGTDILRVIEEEPERLTEVYGLGP----KRMRRIAEAWEEQKAIKE 168 Query: 254 RDVA--------ALDTRKSKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLT 305 V +L R K + D I++ + D + AD Sbjct: 169 VMVFLSEVGVSTSLAVRIYKTYGDDAIEVV--RKEPYRLAAD---VWGIGFKTADTIAQA 223 Query: 306 PGPASQDGPDVQQAVTQAIAGLSE-RKVQFTYTDVLARTVGILPPENGVIERARAGIDEA 364 G ++ + ++ ++ ++L+ T IL E+ ++E Sbjct: 224 VGIPHDSPERIKAGLRYTLSQAADAGHCYLPEPNLLSETAKILQ---VDAEQVGPCLEEL 280 Query: 365 ISREQLIPLDREKG------------LFTSGIHVL---------DELSVRALSRDIMKQN 403 ++ E ++ + + + D + A + Sbjct: 281 VAEEGVVRETVRTTGGNQVPAVYLLPFYRAECSLAAALLGLLRCDADRLAAFGDVDWEAA 340 Query: 404 RVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREV 463 + AV + + +A+++G G G+ V +V +A+ + V Sbjct: 341 LGWLARRTGQQLADEQRQAVQLALTRK--VAVLTGGPGC-GKSFTVRSVVELAKAKKATV 397 Query: 464 QIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPG-------STVIVDQGEKLSLK 516 ++A R+ + + + +L G V+VD+ L L Sbjct: 398 LLVAPTGRAAKRLAELTGHEASTVHRLLELQPGGDPKYDRDHPLQADLVVVDECSMLDLV 457 Query: 517 ETLTLLDGAARHNVQVLITDSGQR--TGTGSALMAMKDAGVNTYRWQGGEQRPATIISEP 574 L+ +L+ D Q G G L + A V + R A Sbjct: 458 LANKLVKAIPPGAHLLLVGDVDQLPSVGAGEVLRDLLAADVIPHVRLTKIFRQAQQSGIV 517 Query: 575 DRNVRYAR------------------------------LAGDFAASVKAGEESVAQVSGV 604 + A V + + Sbjct: 518 VNAHKINAGRPPALTGFSDFFWFGCEPPADSGLNPAEETAKLVVDIVARRIPARFGLDPR 577 Query: 605 REQAILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYL-RDMYRPGMVMEQWNPET 663 R+ +LT R G L + AL+P R ++RPG + Q Sbjct: 578 RDVQVLTPMHRG---PAGAASLNALLQEALTPYREGVPERRHGGRVFRPGDKVTQLRNNY 634 Query: 664 -------RSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLF----RPEKMPV 712 + V+ ++ + +LT+ + ET + LD + + Sbjct: 635 DKGKAGIFNGTVGVVTGLSLEDGTLTVVTDEDETVDYDFAELDELAHAYAVTIHRSQGSE 694 Query: 713 ADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLEN 772 + +T + L +V+ VV+ G + V Sbjct: 695 YPAVVVPITMSAWTMLQRN---LLYTAVTRARKLVVLVGSRRALAVAVRTPGTGRRHTAL 751 Query: 773 G 773 Sbjct: 752 A 752 Score = 111 bits (276), Expect = 3e-22, Method: Composition-based stats. Identities = 30/155 (19%), Positives = 57/155 (36%), Gaps = 8/155 (5%) Query: 1318 LISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERG---YVANSVWTVTAVSGDSVTL 1374 L EGV GD++ +++ ++G +V VT +S + TL Sbjct: 600 LQEALTPYREGVPERRHGGRVFRPGDKVTQLRNNYDKGKAGIFNGTVGVVTGLSLEDGTL 659 Query: 1375 SDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYV 1434 + E + AYA+T H +QG+ + + M Y Sbjct: 660 TVVTDEDETVDYDFAELDELAHAYAVTIHRSQGSEYPAVVVPI--TMSAWTMLQRNLLYT 717 Query: 1435 ALSRMKQHVQVYTDNRQGWTDAINNA--VQKGTAH 1467 A++R ++ V + +R+ A+ ++ TA Sbjct: 718 AVTRARKLVVLV-GSRRALAVAVRTPGTGRRHTAL 751 >UniRef50_Q15V09 DNA helicase/exodeoxyribonuclease V, alpha subunit n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15V09_PSEA6 Length = 737 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 94/675 (13%), Positives = 192/675 (28%), Gaps = 107/675 (15%) Query: 829 RHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLL 888 R + TR+ + ++ SA H PAQQ L ++++ L+ Sbjct: 128 RFNQASDAVAGSDTRSDTGNNTSSHDRYSSAQHLPAQQLSAKQLHTHQAQEHQSQSKPLI 187 Query: 889 TEAKSFAAEGTGFTELGGEINAQIKRGDLLYVDVAKGY---GTGLLVSRASYEAEKSILR 945 + + E+ G +D+ +G G + + E+ + Sbjct: 188 LQGHELYMQRYWQYEVQLAEKINSMTGRTSTLDIEQGRALLGQLFVSAPDDVGDERDLND 247 Query: 946 HILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAV 1005 + + Q+ A L S +V+ G G GKTT + Sbjct: 248 VNRQSGHGHAQREPEI---------DWQKVAV--CLAASQSVSVITGGPGTGKTTTVIRL 296 Query: 1006 MSAVNMLPESERPR--VVGLGPTHRAVGEMRSAGV----------------DAQTLASFL 1047 M+ + L + + + PT +A + + T+ L Sbjct: 297 MALLQGLARHKGKKLQIKLAAPTGKAAARLSQSISAAMDKLPDALKPDLPSQCSTIHRLL 356 Query: 1048 HDTQL--QQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQA 1105 R + + ++DE+SMV M++ + + V GD DQL + Sbjct: 357 GSIPNSPYFRFNQQHPLHVDVLIVDEASMVDLPLMSKLF-AALPRHAKIVLLGDKDQLAS 415 Query: 1106 IAPGQPFRLQQTRSAADVAIMKEIVRQTP-----------ELREAVYSLINRDVERALSG 1154 + G + + + + Q+P +L + ++ + + Sbjct: 416 VEAGSVLSDICSAA---LNFSPTVFNQSPPYSDQALGVVKDLCQIELNINTLNKAPISNS 472 Query: 1155 LESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVR 1214 L + S ++ AK + D P L ++ Sbjct: 473 LALLHKSYRFSEKSGIGRLARAINMGRLANAKALFSDDVYQDVVWQTSDDPKALVNRLLP 532 Query: 1215 DYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGEL 1274 DY R+ T + V + +++ +++ V + + EL Sbjct: 533 DYQRYFERVRQVCARGTLSTQGIEVFALL----QQQQVLCAQKEASWGVKQMNVLIESEL 588 Query: 1275 RRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTP 1334 + E RD ++ + +L G+ + P E + ++ Sbjct: 589 NKHGAIELGRD--------FYIGRPVMLKQNDHSLGLFNGDIGIAMPDEENEGLMKVWFV 640 Query: 1335 DTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHI 1394 +R Sbjct: 641 TEQN-------------------------------------------TLRGVLPSRLPPH 657 Query: 1395 DLAYAITAHGAQGASETFAIALEGTEGNRK--LMAGFESAYVALSRMKQHVQVYTDNRQG 1452 D YA+T H +QG+ R + E Y L+R K+ +Y+D Q Sbjct: 658 DTVYAMTIHKSQGSEFDHVYLCLPRIETRSQARLLSRELLYTGLTRAKKSFNLYSD-EQA 716 Query: 1453 WTDAINNAVQKGTAH 1467 + ++ Q+G+ Sbjct: 717 LSISVARRCQRGSGL 731 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 77/520 (14%), Positives = 135/520 (25%), Gaps = 52/520 (10%) Query: 356 RARAGIDEAISR--EQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSV 413 + + E I+ + LD E+G G + RD+ NR + H Sbjct: 200 QYEVQLAEKINSMTGRTSTLDIEQGRALLGQLFVSAPDDVGDERDLNDVNRQSGHGHAQR 259 Query: 414 PRTAG-YSDAVSVLAQDRPSLAIVSGQGGAAGQR-ERVAELVMMAREQGRE--VQIIAAD 469 AV + A S+ G +A L +AR +G++ +++ A Sbjct: 260 EPEIDWQKVAVCLAASQSVSVITGGPGTGKTTTVIRLMALLQGLARHKGKKLQIKLAAPT 319 Query: 470 RRSQMNMKQDERL---------------SGELITGRRQ--------LLEGMAFTPGSTVI 506 ++ + Q I +I Sbjct: 320 GKAAARLSQSISAAMDKLPDALKPDLPSQCSTIHRLLGSIPNSPYFRFNQQHPLHVDVLI 379 Query: 507 VDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR--TGTGSALMAMKDAGVN---TYRWQ 561 VD+ + L L RH VL+ D Q GS L + A +N T Q Sbjct: 380 VDEASMVDLPLMSKLFAALPRHAKIVLLGDKDQLASVEAGSVLSDICSAALNFSPTVFNQ 439 Query: 562 G---GEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSE- 617 +Q + + L ++ A + S L +AI Sbjct: 440 SPPYSDQALGVVKDLCQIELNINTLNKAPISNSLALLHKSYRFSEKSGIGRLARAINMGR 499 Query: 618 LKTQGVLGLPEVTMTALSPVWLDSRSR--YLRDMYRP--GMVMEQWNPETRSHDRYVIDR 673 L L +V + D ++ L Y+ V + T S + Sbjct: 500 LANAKALFSDDVYQDVVWQTSDDPKALVNRLLPDYQRYFERVRQVCARGTLSTQGIEVFA 559 Query: 674 VTAQSHSLTLRDAQ--GETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSG 731 + Q L + G Q+ + + + G + + L + Sbjct: 560 LLQQQQVLCAQKEASWGVKQMNVLIESELNKHGAIELGRDFYIGRPVMLKQNDHSLGLFN 619 Query: 732 GDRLQ-VASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVF- 789 GD + + + V + V S Sbjct: 620 GDIGIAMPDEENEGLMKVWFVTEQNTLRGVLPSRLPPHDTVYAMTIHKSQGSEFDHVYLC 679 Query: 790 ------ASVTQMAMDNATLNGLARSGRDVRLYSSLDETRT 823 S ++ GL R+ + LYS Sbjct: 680 LPRIETRSQARLLSRELLYTGLTRAKKSFNLYSDEQALSI 719 >UniRef50_A5FUA1 ATP-dependent exoDNAse (Exonuclease V) alpha subunit-helicase superfamily I member-like protein n=3 Tax=Acidiphilium cryptum JF-5 RepID=A5FUA1_ACICJ Length = 1699 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 138/891 (15%), Positives = 264/891 (29%), Gaps = 161/891 (18%) Query: 68 RMQDGSNRHRPGY-DLTFSAPKSVSMMAMLGGDK----RLIDAHNQAVDFAVRQVEALAS 122 R ++ GY D TFSA K++S+ + +L AH AV + ++E + Sbjct: 707 RNAVNRSKTPIGYVDFTFSADKTISLAWAFAPTEAERNQLAQAHKDAVAATMAEIEQVIG 766 Query: 123 TRVMTDGQSETVLTGNLVMALFNHDTSR-----------------------DQEPQLHTH 159 G E G + F+H T+R +PQLHTH Sbjct: 767 QARKGKGGKEATEQGRIGWITFDHYTARPTLEIARETADGRTETEIVSVKVAGDPQLHTH 826 Query: 160 AVVANV-TQHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVV 218 V NV +G +L++ ++ +G +Y+ L + + G E+ Sbjct: 827 VAVPNVIVTESGRVVSLNTLQMHGRI---------HEWGAIYQAHLAQNLRRAGASIELD 877 Query: 219 GKHGMWEMPGVPVE---AFSGRSQTIREAVGEDAS--LKSRDVAALDTR----------K 263 G + VP E AFS R++ A+ D D R Sbjct: 878 RTTGAARLSAVPEEIRAAFSKRTRDALSDAKAYAASVGAEWDRMTGDERIKLLKGGAFAS 937 Query: 264 SKQHVDPEIKMAEWMQTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQA 323 D A W + +E G+ ++ A +L +A + Sbjct: 938 RSAKADDMSDFASWRRQAEERGYQHKSVLQDAAPAENLTEAAR------LDRAYEAAARV 991 Query: 324 IAGLSERKVQFTYTD--------VLARTVGILPPENGVIERARA---------------- 359 + R+ D ++A + + VI R RA Sbjct: 992 LGEQFARRAVIKDEDERVAAARGLVAAGIKDGGDVDRVIARLRARGVVETGGAGGNGEPA 1051 Query: 360 -----GIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVP 414 ++ + T+ HV E ++ L+ + R T++P + Sbjct: 1052 RTQIIAVETVRDDPDNPDVKITTTRLTTRAHVEQESALVELAAQAGQDRRGTLNPAQVKR 1111 Query: 415 RTA------------GYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGRE 462 A + L V AG+ + LV R+QG + Sbjct: 1112 GIAASGLSFTGEHGVAQRRMIDHLGMSGR--FAVGIGAAGAGKTTLLKPLVAAWRDQGAD 1169 Query: 463 VQIIAADRRSQMNMK------QDERLSGELITGRRQLLE-----GMAFTPGSTVIVDQGE 511 + I+ R ++ + E + I + + + S V++D+ Sbjct: 1170 IHGISLGWRQARELREAGLNTEAETGGRDTIAAVSVFINRVESGRLDLSNRSVVVIDELG 1229 Query: 512 KLSLKETLTLLDGAARHNVQVLITDSG---QRTGTGSALMAMKDAGVNTYRWQGGEQRPA 568 + ++ L LL RH +++ Q G + ++ Sbjct: 1230 TIGTRQMLDLLRLQERHGFRMVAIGDPKQCQSIEAGQVIGLLEKG-------------LG 1276 Query: 569 TIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPE 628 + S + A + A ++ G + ++ T I V G P Sbjct: 1277 EVPSIESSVRQTNERAREIAGLLRKGGAEAVGKALDMKRQDGTAEI--------VAGGPS 1328 Query: 629 VTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQG 688 + + +W R + RP + P + D A G Sbjct: 1329 EVIARAAALW---DERRKANADRPRFTLSISTPTNQ-------DARAIGEAIRQRLLASG 1378 Query: 689 ETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRV--------SGGDRLQVASV 740 E R++ + MP+A E++R+ + + G L++ S+ Sbjct: 1379 ELGQSRMTLAAVDKNTGEHYAMPIATREKIRLFARTNAAMLDGGKGAIGDNGSILEITSI 1438 Query: 741 SEDAMTVVVPGRAEPATLP--VSDSPFTALKLENGWVETPG--HSVSDSATVFAS--VTQ 794 ++ + + E ++D ++L G+ T ++ + +F + +Q Sbjct: 1439 RDEGLVLRNDHGREGFVKWDTLADKETGRMRLAYGYAMTTNTAQGITTTEHIFVTPGGSQ 1498 Query: 795 MAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAG 845 T +R +S R R + Sbjct: 1499 TTDGFKTYVSGSRHRERDYWLTSEGAERQEIAGRRPLGDPRPIREHDIWTN 1549 Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats. Identities = 143/921 (15%), Positives = 235/921 (25%), Gaps = 161/921 (17%) Query: 738 ASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSD----------SAT 787 + + E S AL + + G Sbjct: 874 IELDRTTGAARLSAVPEEIRAAFSKRTRDALSDAKAYAASVGAEWDRMTGDERIKLLKGG 933 Query: 788 VFASVTQMAMDNATLNGLARSGRDVRLYSS--LDETRTAEKLARHPSFTVVSEQIKTRAG 845 FAS + A D + R + L + AE L E G Sbjct: 934 AFASRSAKADDMSDFASWRRQAEERGYQHKSVLQDAAPAENLTEAARLDRAYEAAARVLG 993 Query: 846 ETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELG 905 E A+ + A+ + + + + ++ A G G Sbjct: 994 EQFARRAVIKDEDERVAAARGLVAAGIKDGGDVDRVIARLRARGVVETGGAGGNGEPART 1053 Query: 906 GEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVMPLMERVPGEL 965 I + R D DV T L +RA E E +++ + + + + Sbjct: 1054 QIIAVETVRDDPDNPDVKI--TTTRLTTRAHVEQESALVELAAQAGQDRRGTLNPAQVKR 1111 Query: 966 MEKLTS---------GQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESE 1016 + QR L S RF V G AG GKTT + +++A + Sbjct: 1112 GIAASGLSFTGEHGVAQRRMIDH-LGMSGRFAVGIGAAGAGKTTLLKPLVAA----WRDQ 1166 Query: 1017 RPRVVGLGPTHRAVGEMRSAGVDA-------QTLASFLHDTQLQQRSGETPDFSNTLFLL 1069 + G+ R E+R AG++ T+A+ + + SG + ++ ++ Sbjct: 1167 GADIHGISLGWRQARELREAGLNTEAETGGRDTIAA-VSVFINRVESGRLDLSNRSVVVI 1225 Query: 1070 DESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEI 1129 DE +G M L G R VA GD Q Q+I GQ L + +I + Sbjct: 1226 DELGTIGTRQMLDLLRLQERHGFRMVAIGDPKQCQSIEAGQVIGLLEKGLGEVPSIESSV 1285 Query: 1130 VRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAE 1189 + RE L E L+ + E + E + A Sbjct: 1286 RQTNERAREIAGLLRKGGAEAVGKALDMKRQDGTAEIVAGGPSEVIARAAALWDERRKAN 1345 Query: 1190 AQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVRE 1249 A + R I T N+D R + I Sbjct: 1346 ADR------------------------------PRFTLSISTPTNQDARAIGEAIRQRLL 1375 Query: 1250 KAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITL 1309 +GELG+ ++ + N + ++T E R + G D+G I Sbjct: 1376 ASGELGQSRMTLAA-VDKNTGEHYAMPIATREKIRLFARTNAAMLDGGKGAIGDNGSILE 1434 Query: 1310 QDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSG 1369 D ++D R Sbjct: 1435 IT----------------------------SIRDEGLVLRNDHGRE-------------- 1452 Query: 1370 DSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGF 1429 G + +E + YA+T + AQG + T I + Sbjct: 1453 -------GFVKWDTLADKETGRMRLAYGYAMTTNTAQGITTTEHIFVTPGGSQTTDGFK- 1504 Query: 1430 ESAYVALSRMKQHVQVYTDNRQG------------------------WTDAINNAVQKGT 1465 YV+ SR ++ T WT I +K Sbjct: 1505 --TYVSGSRHRERDYWLTSEGAERQEIAGRRPLGDPRPIREHDIWTNWTRNIARQPEKTN 1562 Query: 1466 AHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPARFIAPGRKYPQP 1525 A D+ + + A R+A D RF + Sbjct: 1563 ALDLVKIGEEARRNAARAFLKGLAADEK--------REAAGLPSDLSQRFARTQARAGAQ 1614 Query: 1526 YVALPAFDRNGKSAGIWLNPLTTDDG----------NGLRGFSGEGRVKGSGDAQFVALQ 1575 R + G L + R R Q Sbjct: 1615 GSLTETMARAAEDKGQALARIERAAPAVRAAVAAGWERARPLIEAARRSARARLQSALEG 1674 Query: 1576 GSRNGESLLADNMQDGVRIAR 1596 R + + + R Sbjct: 1675 HRRQAQRQAEAHTDEQESRKR 1695 >UniRef50_Q310C7 ATP-dependent DNA helicase, RecD/TraA family n=4 Tax=Deltaproteobacteria RepID=Q310C7_DESDG Length = 698 Score = 211 bits (536), Expect = 3e-52, Method: Composition-based stats. Identities = 74/518 (14%), Positives = 151/518 (29%), Gaps = 65/518 (12%) Query: 646 LRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLF 705 +P +++ W + ++ +D + D +G + Sbjct: 2 FARENQPVVLLGSWATHPKYGRQFKVDGMEHDLE----LDPEGLIHYLANHPEIKGIGPA 57 Query: 706 RPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVSDSPF 765 + + + G+ T R++ RL DA + + ++ + Sbjct: 58 KARLIVESFGDAFEETLLNDPERIALKARL-----PLDAARRLRDEWLKNRSVNAVMAWL 112 Query: 766 TALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAE 825 +A L + V T + + + +R + + A Sbjct: 113 SAFGLTHHQVTTLVERLGGNCLDILKEDPYILIRE-----------IRGFGFKKVDKIAR 161 Query: 826 KLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALPVVESKKLAFSMV 885 KL T +L+ Sbjct: 162 KLGTPKDHTPRIRAGLNFCVREALDNG--------------------------HCWIEYE 195 Query: 886 DLLTEAKSFAAEGTGFTE--LGGEINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSI 943 DL+ +A + + ++A I+ L G ++ E+ + Sbjct: 196 DLVDQANLLLVMDALDSRVRIESALDALIEEQALA---CDSHGGRFVVALPEIVRMEREL 252 Query: 944 LRHILEGKEAVMPL------MERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVG 997 + E P ++ + L Q A R L+ S +++ G AG G Sbjct: 253 A-LLFGQAETPNPHFQSVKKLDALIRRCASTLNEKQLDAVRSALQHS--ISLISGGAGSG 309 Query: 998 KTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRS-AGVDAQTLASFLHDTQLQQRS 1056 K+ +S +N + E VV PT +A + +G T+ L Sbjct: 310 KSYT----ISVINTICEESDLEVVLAAPTGKAAKRLEEVSGRSGTTIHRLLGYDGKGFSR 365 Query: 1057 GETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQ 1116 + + ++DE SMV + + + GD +QL + PG R Sbjct: 366 SKENPIDADVLVVDEFSMVDVPLAWHLFEAVDLSRTTVLLVGDHNQLPPVGPGNILRDLI 425 Query: 1117 TRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSG 1154 A I+ ++VRQ L+E +++ +V + Sbjct: 426 QTRAIPTVILDKVVRQAGVLKENCTAVLKGEVRKTSEA 463 Score = 187 bits (473), Expect = 4e-45, Method: Composition-based stats. Identities = 90/686 (13%), Positives = 190/686 (27%), Gaps = 91/686 (13%) Query: 171 EWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVV---GKHGMWEMP 227 + + D + + AN + K + VE+ G E + Sbjct: 26 KVDGMEHDLELDPEGLIHYLANHPEIKGIGPAKARLIVESFGDAFEETLLNDPERIALKA 85 Query: 228 GVPVEAFSGRSQT---------IREAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWM 278 +P++A + + V L R +D + ++ Sbjct: 86 RLPLDAARRLRDEWLKNRSVNAVMAWLSAFGLT-HHQVTTLVERLGGNCLDILKE-DPYI 143 Query: 279 QTLKETGFDIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTD 338 + GF + A + + TP + V++A+ Y D Sbjct: 144 LIREIRGFGFKKVDKIARKLGTPKDHTPRIRAGLNFCVREALDN-------GHCWIEYED 196 Query: 339 VLARTVGILPPENGVIE-RARAGIDEAISREQLIPLDREKGLFTSG----IHVLDELSVR 393 ++ + +L + R + +D I + L D G F + + EL++ Sbjct: 197 LVDQANLLLVMDALDSRVRIESALDALIEEQAL-ACDSHGGRFVVALPEIVRMERELALL 255 Query: 394 ALSRDIMKQNRVTVHPEKSV------PRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRE 447 + + +V ++ DAV Q S++++SG G +G+ Sbjct: 256 FGQAETPNPHFQSVKKLDALIRRCASTLNEKQLDAVRSALQ--HSISLISGGAG-SGKSY 312 Query: 448 RVAELVMMAREQGREVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGMAFTPG----- 502 ++ + + E EV + A ++ +++ SG I Sbjct: 313 TISVINTICEESDLEVVLAAPTGKAAKRLEEVSGRSGTTIHRLLGYDGKGFSRSKENPID 372 Query: 503 -STVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR---TGTGSALMAMKDAGVNTY 558 ++VD+ + + L + VL+ + G G+ L + Sbjct: 373 ADVLVVDEFSMVDVPLAWHLFEAVDLSRTTVLLVGDHNQLPPVGPGNILRDLIQTRAIPT 432 Query: 559 RWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQ---VSGVREQAILTQAIR 615 R A ++ E V + ASV + + ++ L + + Sbjct: 433 VILDKVVRQAGVLKENCTAVLKGEVRKTSEASVSGCRDWYLVDQFTDPMAARSFLLELFQ 492 Query: 616 SELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVT 675 L T G + + + L+P Sbjct: 493 ERLDTLGFDIIKD--VQVLTPTHKGPLGTKE----------------------------- 521 Query: 676 AQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRL 735 + + + + R + + P +++ T L V G Sbjct: 522 --------LNEELQRLIQRKLWNTEVPPVAMGRRAPFLKHDKVIQTRNNYDLNVMNGAIG 573 Query: 736 QVASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDS---ATVFASV 792 V V + T+V+ P L L+L + + Sbjct: 574 YVVDVLANG-TLVIDFDGMPVELEKGSPDLQDLQLAYALTIHKTQGSEFPCAVVVIHKAH 632 Query: 793 TQMAMDNATLNGLARSGRDVRLYSSL 818 + M N G+ R+ R + Sbjct: 633 SFMHHRNLLYTGVTRARRTAIVLGDH 658 Score = 106 bits (264), Expect = 9e-21, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 49/141 (34%), Gaps = 2/141 (1%) Query: 1308 TLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAV 1367 T + E RLI + E + D++ T+++ + + ++ V V Sbjct: 519 TKELNEELQRLIQRKLWNTEVPPVAMGRRAPFLKHDKVIQTRNNYDLNVMNGAIGYVVDV 578 Query: 1368 SGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMA 1427 + + D Q + LAYA+T H QG+ A+ + M Sbjct: 579 LANGTLVIDFDGMPVELEKGSPDLQDLQLAYALTIHKTQGSEFPCAVVVIH--KAHSFMH 636 Query: 1428 GFESAYVALSRMKQHVQVYTD 1448 Y ++R ++ V D Sbjct: 637 HRNLLYTGVTRARRTAIVLGD 657 >UniRef50_B2JKV2 Exodeoxyribonuclease V, alpha subunit n=2 Tax=Burkholderia RepID=B2JKV2_BURP8 Length = 672 Score = 211 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 98/582 (16%), Positives = 176/582 (30%), Gaps = 56/582 (9%) Query: 918 LYVDVAKGYGTGLLVSRASYEAEKSILRHILEGK------EAVMPLMERVPGELMEKLT- 970 + G G L Y+ E+ + + +++ + E + + Sbjct: 102 YALRPLVVDGQGRLYLARYYDYERRLAQSLVDHARVEHEDGVSGEMSPHALRERLLRYFG 161 Query: 971 -------SGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGL 1023 QR A M L R T+V G G GKTT V++ + + RV Sbjct: 162 PPQDEQIDWQRVAAVMALSG--RLTIVSGGPGTGKTTTVVGVLACLLDARPA--LRVALA 217 Query: 1024 GPTHRAVGEMRSAG----------------VDAQTLASFLHDTQ-LQQRSGETPDFSNTL 1066 PT +A M+ A + TL L + R + Sbjct: 218 APTGKAAQRMQEALLARAGSLPPELAARLPHTSFTLHRLLGTGPDGRFRHHRENPLPYDV 277 Query: 1067 FLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIM 1126 ++DE+SM+ + A V GD DQL A+ G F + A Sbjct: 278 IVIDEASMIDVAMATHLFD-ALARDTHLVMLGDKDQLAAVEAGAVFGELSAQPAFTA--- 333 Query: 1127 KEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAK 1186 Q A + R + AL ++ Q + EAK Sbjct: 334 -----QGVGSIAAALGIGERSLRDALPA-TAICHDARSDQAEPLFDDLFAMSSGAPSEAK 387 Query: 1187 LAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHD 1246 A A + L AI R A ++ L V ++ + D Sbjct: 388 PARLAPLADCVVWLERNYRFGLESAIGRLSLAIRRGAAQEALDVMDIDPAVPCAAAFHED 447 Query: 1247 VREKAGELGKEQVMVPVLNTANIRDGELR-RLSTWETHRDALVLVDNVYHRIAGISKDDG 1305 + E ++ A+ L + +H AL N + + Sbjct: 448 MDAAPSEHTIHRLAAGFAAYADALTAALFSTSANAASHAPALFDALNRFRILCATRLGAR 507 Query: 1306 LITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVT 1365 + +A ++ + + T++D G + Sbjct: 508 GVDHMNAAMAAQVRRAARMPLAIGAQWFAGR-------PIMVTRNDYALGLFNGDIGIAL 560 Query: 1366 AVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKL 1425 + ++ + +R A D A+A+T H +QG+ A+ + + +R Sbjct: 561 PGADGALRVFFRGADGALRAVSPAALPPHDTAFALTVHKSQGSEFDHAVLMLPSTFSR-- 618 Query: 1426 MAGFESAYVALSRMKQHVQVYTDNRQGWTDAINNAVQKGTAH 1467 + E Y A++R ++ V+V +R AI Q+ + Sbjct: 619 VLSRELVYTAVTRARERVEVV-GSRAVLMRAIATPTQRDSGL 659 Score = 86.2 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 75/631 (11%), Positives = 142/631 (22%), Gaps = 95/631 (15%) Query: 287 DIRAYRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFTYTDVLAR---- 342 D R G AS+D + + + T D LA+ Sbjct: 20 DFSTALAEGFARRVSALALRGGASEDAVRWAARAAFSASRATSEGHVCTSLDELAQRYEA 79 Query: 343 TVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQ 402 V + A G+ A + L+ + + L+ + ++ Sbjct: 80 EVAHVRCALLASGVASDGMQPAYALRPLVVDGQGRLYLARYYDYERRLAQSLVDHARVEH 139 Query: 403 NRVTVHPEKSVPRTAG--------YSDA-----VSVLAQDRPSLAIVSGQGGAAGQRERV 449 + V+ + L IVSG G V Sbjct: 140 EDGVSGEMSPHALRERLLRYFGPPQDEQIDWQRVAAVMALSGRLTIVSGGPGTGKTTTVV 199 Query: 450 AELVMMAREQG-REVQIIAADRRSQMNMKQDERLSG---------------ELITGRRQL 493 L + + V + A ++ M++ + Sbjct: 200 GVLACLLDARPALRVALAAPTGKAAQRMQEALLARAGSLPPELAARLPHTSFTLHRLLGT 259 Query: 494 LEGMAFT-------PGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR--TGTG 544 F P +++D+ + + L D AR V++ D Q G Sbjct: 260 GPDGRFRHHRENPLPYDVIVIDEASMIDVAMATHLFDALARDTHLVMLGDKDQLAAVEAG 319 Query: 545 SALMAM-------------KDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASV 591 + + A + + PAT I R+ + L D A Sbjct: 320 AVFGELSAQPAFTAQGVGSIAAALGIGERSLRDALPATAICHDARSDQAEPLFDDLFAMS 379 Query: 592 KAGEESVAQVSGVREQAILTQAIR-------SELKTQGVLGLPEVTMTALSPVWLDSRSR 644 + R S + + AL + +D Sbjct: 380 SGAPSEAKPARLAPLADCVVWLERNYRFGLESAIGRLSLAIRRGAAQEALDVMDIDPA-V 438 Query: 645 YLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSL 704 + M A + +L A + + + + + Sbjct: 439 PCAAAFHEDMDAAPSEHTIHRLAAGFAAYADALTAALFSTSANAASHAPALFDALNRFRI 498 Query: 705 FRPEKM----------------------------PVADGERLRVTGKIPGLRVSGGDRLQ 736 ++ G + VT L + GD Sbjct: 499 LCATRLGARGVDHMNAAMAAQVRRAARMPLAIGAQWFAGRPIMVTRNDYALGLFNGDIG- 557 Query: 737 VASVSEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFA---SVT 793 +A D V A+ A VS + V + + Sbjct: 558 IALPGADGALRVFFRGADGALRAVSPAALPPHDTAFALTVHKSQGSEFDHAVLMLPSTFS 617 Query: 794 QMAMDNATLNGLARSGRDVRLYSSLDETRTA 824 ++ + R+ V + S A Sbjct: 618 RVLSRELVYTAVTRARERVEVVGSRAVLMRA 648 >UniRef50_C4XNH4 Conjugal transfer protein TraA n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XNH4_DESMR Length = 947 Score = 211 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 131/835 (15%), Positives = 247/835 (29%), Gaps = 153/835 (18%) Query: 858 SALHTPAQQAIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIKRGDL 917 L A+ L + ++ F++ DL K E E+ + A +K + Sbjct: 245 EELQNIARNDHPAILEALVYRQTTFNVRDLNKTLKKHGIEDDDEREVL--VEAILKNAEC 302 Query: 918 LYVDVAKGYGTGLLVSRASYEAEKSILR---HILEGKEAVMPLMERVPGELMEKLTSGQR 974 + + A G + SR E +IL ILEGK R + L + QR Sbjct: 303 VPLFNAFGEEANVYTSRKVRAEEAAILGNVGKILEGKGGAASAKSRAAALASKTLDTEQR 362 Query: 975 AATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMR 1034 A ++ +R V+QG AG GK+ A A E++ RVVGL PT+ +M Sbjct: 363 EAFD-VMTAENRLCVIQGRAGAGKSYTMGAAREAF----EADGWRVVGLAPTNAVSRDMA 417 Query: 1035 SAGV-DAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGR 1093 G +A TL S L + ++ P T+ +DE++M+ N+ + R G + Sbjct: 418 KDGFKEASTLHSELLKQENPKKKT-VPWDETTVVFVDEAAMMDNSILLRLTDHAERTGAK 476 Query: 1094 AVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPEL-REAVYSLINRDVERAL 1152 V GD QL ++ G + +TR++ + ++ RQ E +A +L + + A+ Sbjct: 477 LVLIGDDAQLSSVQRGGMYSEIRTRTSESLI--SQVRRQKEEWMIKASMNLADGRIGEAI 534 Query: 1153 SGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAI 1212 D L E Sbjct: 535 EAYNKNG-------------------------------------HIIPSNDPIKELLEQW 557 Query: 1213 VRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDG 1272 D R + N + +N + +AG + + + G Sbjct: 558 KTDALNNPSVNR---FVYAGTNAEVNAINDACSEAMREAGHVIGAFEFI-------CKKG 607 Query: 1273 ELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLY 1332 +L T+ + I+ G + + T L Sbjct: 608 DLAFQQTFGVGDRLQINATAKNINSDLINGSFGTVQNISDDEITVLFD------------ 655 Query: 1333 TPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQ 1392 T ++ T F G+ TV G + T Sbjct: 656 ---TGQIVTWKPSEFN------GFALGYAGTVYKGQGKTQTDV----------------- 689 Query: 1393 HIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTD---- 1448 YA+ H G++ + YV +R K + ++Y D Sbjct: 690 -----YAL--H---GSTWDN-----------------RTTYVGATRHKGNFRLYVDKNKV 722 Query: 1449 -NRQGWTDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLA 1507 + + ++ + GT ++ A ++ + + + + GL Sbjct: 723 KSLESLVKGMSRSKSSGTTQSYYD---------ANQILDRQQRVEKMNGKE--FEKFGLY 771 Query: 1508 GGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGEGRVKGSG 1567 + K P +A+ A + + + G+ + + + + + Sbjct: 772 SMLKTKHDVEIKHKEKLPRLAIVALELS--NYGLSKKDIAHCLEHDIDPTQVKKILAYLD 829 Query: 1568 DAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPGAITGGRVWGD 1627 + L S ++++A + S RI I R Sbjct: 830 SQEAKTLAASLQAQNIIAGPSHIKI--------SKWSKRITQTFSIAKKQLIKKRRQEHK 881 Query: 1628 IPDNSVQPGAGNGEPVTAEVLAQRQAEEAIRRETERRADEIVRKMAENKPDLPDG 1682 + EP + + E + + ++ + G Sbjct: 882 SWRQRWLEQMRDYEPTMTILDSSMHPETGAKAYVAADTEPTSVDHGTDQQTIEPG 936 Score = 190 bits (482), Expect = 4e-46, Method: Composition-based stats. Identities = 82/647 (12%), Positives = 177/647 (27%), Gaps = 82/647 (12%) Query: 293 DAADQRADLRTLTPGPASQDGPDVQQAVTQA-IAGLSERKVQFTYTDVLARTVGILPPEN 351 A + + ++ ++ + A + L R+ F D+ ++ Sbjct: 227 KARHIKNSAKVAENQTRLEELQNIARNDHPAILEALVYRQTTFNVRDLNKTLKKHGIEDD 286 Query: 352 GVIERARAGIDEAISREQLIPL----DREKGLFTSGIHVLDELSVRALS------RDIMK 401 + ++ + + +PL E ++TS +E ++ + Sbjct: 287 ---DEREVLVEAILKNAECVPLFNAFGEEANVYTSRKVRAEEAAILGNVGKILEGKGGAA 343 Query: 402 QNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGR 461 + S +A + L ++ G+ G AG+ + G Sbjct: 344 SAKSRAAALASKTLDTEQREAFD-VMTAENRLCVIQGRAG-AGKSYTMGAAREAFEADGW 401 Query: 462 EVQIIAADRRSQMNMKQDERLSGELITGRRQLLEGM-----AFTPGSTVIVDQGEKLSLK 516 V +A +M +D + E + + V VD+ + Sbjct: 402 RVVGLAPTNAVSRDMAKDGFKEASTLHSELLKQENPKKKTVPWDETTVVFVDEAAMMDNS 461 Query: 517 ETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDR 576 L L D A R ++++ + + ++ G+ Sbjct: 462 ILLRLTDHAERTGAKLVLIGDDAQLSS------VQRGGMY-------------------S 496 Query: 577 NVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGLPEVTMTALSP 636 +R + + EE + + S + +AI G + + L Sbjct: 497 EIRTRTSESLISQVRRQKEEWMIKASMNLADGRIGEAI-EAYNKNGHIIPSNDPIKELLE 555 Query: 637 VWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLT-----LRDAQGETQ 691 W S +R+V A+ +++ G Sbjct: 556 QWKTDA------------------LNNPSVNRFVYAGTNAEVNAINDACSEAMREAGHVI 597 Query: 692 VVRISSLDSSWSLFRPEKMPVADGERLRV--TGKIPGLRVSGGDRLQVASVSEDAMTVVV 749 F+ G+RL++ T K + G V ++S+D +TV+ Sbjct: 598 GAFEFICKKGDLAFQQT---FGVGDRLQINATAKNINSDLINGSFGTVQNISDDEITVLF 654 Query: 750 PGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSG 809 + S F L G + + V+A + T G R Sbjct: 655 DTGQ---IVTWKPSEFNGFALGYAGTVYKGQGKTQT-DVYALHGSTWDNRTTYVGATRHK 710 Query: 810 RDVRLYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETS---LETAISHQKSALHTPAQQ 866 + RLY ++ ++ E L + S + S ++ + + Sbjct: 711 GNFRLYVDKNKVKSLESLVKGMSRSKSSGTTQSYYDANQILDRQQRVEKMNGKEFEKFGL 770 Query: 867 AIHLALPVVESKKLAFSMVDLLTEAKSFAAEGTGFTELGGEINAQIK 913 L K + L A + G ++ + I Sbjct: 771 YSMLKTKHDVEIKHKEKLPRLAIVALELSNYGLSKKDIAHCLEHDID 817 >UniRef50_C1D6T5 Exonuclease V alpha subunit RecD n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D6T5_LARHH Length = 654 Score = 211 bits (535), Expect = 3e-52, Method: Composition-based stats. Identities = 73/569 (12%), Positives = 155/569 (27%), Gaps = 76/569 (13%) Query: 931 LVSRASYEAEKSILRHILEGKEAVMPLMERVPGELMEKLTSGQ-----------RAATRM 979 L R ++ E++++ I + + + + L L + + + Sbjct: 125 LYLRRYWQCEETVVEAIRARLPQRLAVPDDLSVRLDRLLADMRDADEAARRQTHWQSVAV 184 Query: 980 ILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPR---VVGLGPTHRAVGEMRSA 1036 L F ++ G G GKTT ++ + L + PT +A ++ + Sbjct: 185 ALAARLGFCIISGGPGTGKTTTVVRLLGLLQGLTLDAGRTPLAIRLAAPTGKAAARLQDS 244 Query: 1037 GVDA----------------QTLASFLHDTQ--LQQRSGETPDFSNTLFLLDESSMVGNT 1078 A TL L R + ++DE+SM+ Sbjct: 245 IRQAVARLDPAVREHVPAEVSTLHRLLGPLPDSRHFRHHAGQPLPLDVLVIDEASMIDLE 304 Query: 1079 DMARAYALIAAGGGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELRE 1138 MA + R + GD DQL ++ G S DV + Sbjct: 305 MMAAVLS-ALPAHARLILLGDKDQLASVEAGAVLGSLCAGSRVDV--------------Q 349 Query: 1139 AVYSLINRDVERALSGLESVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKG 1198 A G S + +H V + + + A Sbjct: 350 DPAQWAGSHEMAAWLGAASGYAVKADGLPAGALTDHVVVLKKSHRFGDDSGIGELARAVN 409 Query: 1199 EAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQ 1258 + T++ P +R + +A Sbjct: 410 DGDASRAATVWPRHADSIARLEPASRCIEQLALQGRSSGSP-------AGWQAASYRAYL 462 Query: 1259 VMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRL 1318 ++ + + + L + R L EG + + Sbjct: 463 EIMAAGDQGDPDGWARQVLEAFNRFRVLCALRQG-------------------EEGVSGV 503 Query: 1319 ISPREAVAEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQ 1378 + EA L G + K+D G + + ++ + Sbjct: 504 NAAIEASLRTAGLLPAGRSEWYAGRPVMVLKNDYGLGLMNGDTGIALPMPDATLRVCFAL 563 Query: 1379 QTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSR 1438 +R ++ A+A+T H +QG+ + + L + + E Y ++R Sbjct: 564 PDGRVRQVLPSRLTDVESAFAMTVHKSQGSEFSHTVLLLPQ--HDSPILTRELVYTGITR 621 Query: 1439 MKQHVQVYTDNRQGWTDAINNAVQKGTAH 1467 + + + + + A++ + + Sbjct: 622 ARDRLTLV-GSADIFRRAVSRRTVRHSGL 649 Score = 97.4 bits (240), Expect = 5e-18, Method: Composition-based stats. Identities = 60/510 (11%), Positives = 130/510 (25%), Gaps = 57/510 (11%) Query: 383 GIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGA 442 + L+V + + + R + +V+V R I+SG G Sbjct: 142 RARLPQRLAVPDDLSVRLDRLLADMRDADEAARRQTHWQSVAVALAARLGFCIISGGPGT 201 Query: 443 AGQRERVAELVMMAR---EQGRE---VQIIAADRRSQMNMKQDER--------------- 481 V L ++ + GR +++ A ++ ++ R Sbjct: 202 GKTTTVVRLLGLLQGLTLDAGRTPLAIRLAAPTGKAAARLQDSIRQAVARLDPAVREHVP 261 Query: 482 LSGELITGRRQLLEG--------MAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVL 533 + L P +++D+ + L+ +L H +L Sbjct: 262 AEVSTLHRLLGPLPDSRHFRHHAGQPLPLDVLVIDEASMIDLEMMAAVLSALPAHARLIL 321 Query: 534 ITDSGQR--TGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASV 591 + D Q G+ L ++ AG + + ++ + D + Sbjct: 322 LGDKDQLASVEAGAVLGSL-CAGSRVDVQDPAQWAGSHEMAAWLGAASGYAVKADGLPAG 380 Query: 592 KAGEESVAQVSGVR--EQAILTQAIR-----SELKTQGVLGLPEVTMTALSPVWLDSRSR 644 + V R + + + + R + V ++ L P Sbjct: 381 ALTDHVVVLKKSHRFGDDSGIGELARAVNDGDASRAATVWPRHADSIARLEPASRCIEQL 440 Query: 645 Y------------LRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQV 692 YR + + + + QGE V Sbjct: 441 ALQGRSSGSPAGWQAASYRAYLEIMAAGDQGDPDGWARQVLEAFNRFRVLCALRQGEEGV 500 Query: 693 VRISSLDS----SWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVV 748 +++ + L + G + V GL + GD + + + V Sbjct: 501 SGVNAAIEASLRTAGLLPAGRSEWYAGRPVMVLKNDYGLGLMNGDTGIALPMPDATLRVC 560 Query: 749 V-PGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNAT-LNGLA 806 + S ++ G S + + + G+ Sbjct: 561 FALPDGRVRQVLPSRLTDVESAFAMTVHKSQGSEFSHTVLLLPQHDSPILTRELVYTGIT 620 Query: 807 RSGRDVRLYSSLDETRTAEKLARHPSFTVV 836 R+ + L S D R A + Sbjct: 621 RARDRLTLVGSADIFRRAVSRRTVRHSGLA 650 >UniRef50_Q58914 Uncharacterized protein MJ1519 n=1 Tax=Methanocaldococcus jannaschii RepID=Y1519_METJA Length = 1175 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 88/553 (15%), Positives = 169/553 (30%), Gaps = 89/553 (16%) Query: 942 SILRHILEGKEAVMPLMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQ 1001 I + E P V E EK Q A +L +R ++ G AG GKTT Sbjct: 540 EIREKLRIKNENKKP--AGVDNEEYEKALDMQTEAVVNLL--KNRVGILTGPAGTGKTTV 595 Query: 1002 FRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA---GVDAQTLASFLHDTQLQQRSGE 1058 + +M + + ++ L PT ++ + A+T+ ++ + G+ Sbjct: 596 IKTIMELMKEVLGLN--KIYILTPTGKSAMVVNEKLNNLATAKTIHRYIAEEFKDYFEGD 653 Query: 1059 ------------TPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGR-AVASGDTDQLQA 1105 ++DESSMV M R I + + GD +QL Sbjct: 654 NYFILRLDKITGNDKKEIDALIIDESSMVDIETMGRLLGTIKLDNLKYLIFVGDINQLPP 713 Query: 1106 IAPGQPFRL----QQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPS 1161 + G+PF + + + ++ ++R + ++ V + + E +K Sbjct: 714 VGAGKPFYDIYNYLEKVNPQSICKLEIVLR--ADSKKIVELS---KLFLDIDKEERIKIL 768 Query: 1162 QVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTP 1221 + ++ + + E ++K E I+++ Sbjct: 769 NEMFKNKETLGDNEIYRIKENIGGIEKEIITIEVVKDGNIKKSLENAIETILKEN----- 823 Query: 1222 EAREQTLIVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWE 1281 E N K Q++VP GE Sbjct: 824 -NTEDFFDFAVFN--------------------DKLQILVPTK-----TKGEF------- 850 Query: 1282 THRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTIRVGT 1341 Y I ++ I + + + + + Sbjct: 851 ----------GSYMINLFIKQESKFIPDKYKNKMLENWFFGDGKVADKVIQIRNNYKKWV 900 Query: 1342 GDRMRFTKSDRERGYVANSVW---TVTAVSGDSVTLSDGQQTREIRPGQEQ--AEQHIDL 1396 D R K +E G + T + + R P E E+ ++ Sbjct: 901 YDTER-RKWVKEHGVFNGMMGFAYTFKKWNKYQKKYENKTIIRFYYPKIEAYTDEKEMEH 959 Query: 1397 AYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDN--RQGWT 1454 AYAIT H +QG+ I + N+ + E Y A++R K+ + V + + Sbjct: 960 AYAITIHKSQGSGFENVILIIPKGLNKFV--SKEMLYTAITRAKKRLYVIVEEELKNFLE 1017 Query: 1455 DAINNAVQKGTAH 1467 I++ ++ T Sbjct: 1018 TNISDLARRKTNL 1030 Score = 115 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 48/483 (9%), Positives = 125/483 (25%), Gaps = 70/483 (14%) Query: 401 KQNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMARE-Q 459 + V E+ ++AV L + + I++G G G+ + ++ + +E Sbjct: 551 NKKPAGVDNEEYEKALDMQTEAVVNLL--KNRVGILTGPAG-TGKTTVIKTIMELMKEVL 607 Query: 460 GR-EVQIIAADRRSQMNMKQDER--LSGELITG------------------RRQLLEGMA 498 G ++ I+ +S M + + + + I R + G Sbjct: 608 GLNKIYILTPTGKSAMVVNEKLNNLATAKTIHRYIAEEFKDYFEGDNYFILRLDKITGND 667 Query: 499 FTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQ-VLITDSGQRTGTGSALMAMKDAGVNT 557 +I+D+ + ++ LL N++ ++ + A D + Sbjct: 668 KKEIDALIIDESSMVDIETMGRLLGTIKLDNLKYLIFVGDINQLPPVGAGKPFYD--IYN 725 Query: 558 YRWQGGEQRPATIIS-EPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRS 616 Y + Q + + + L+ F K + ++ + I Sbjct: 726 YLEKVNPQSICKLEIVLRADSKKIVELSKLFLDIDKEERIKILNEMFKNKETLGDNEIYR 785 Query: 617 ELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTA 676 + G + +T+ + + + + +E E + D + Sbjct: 786 IKENIGGIEKEIITIEVVKDGNI----KKSLEN-----AIETILKENNTEDFFDFAVFND 836 Query: 677 QSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKM------PVADG-----ERLRVTGKIP 725 + L +GE I+ S F P+K G +++ Sbjct: 837 KLQILVPTKTKGEFGSYMINLFIKQESKFIPDKYKNKMLENWFFGDGKVADKVIQIRNNY 896 Query: 726 --------------GLRVSGGDRL---QVASVSEDAMTVVVPGRAEPATLPVS-DSPFTA 767 V G ++ + + Sbjct: 897 KKWVYDTERRKWVKEHGVFNGMMGFAYTFKKWNKYQKKYENKTIIRFYYPKIEAYTDEKE 956 Query: 768 LKLENGWVETPGHSVSDSATVF---ASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTA 824 ++ + + + + R+ + + + + Sbjct: 957 MEHAYAITIHKSQGSGFENVILIIPKGLNKFVSKEMLYTAITRAKKRLYVIVEEELKNFL 1016 Query: 825 EKL 827 E Sbjct: 1017 ETN 1019 >UniRef50_C3CTA5 Helicase RecD/TraA n=1 Tax=Bacillus thuringiensis Bt407 RepID=C3CTA5_BACTU Length = 750 Score = 210 bits (534), Expect = 4e-52, Method: Composition-based stats. Identities = 84/706 (11%), Positives = 204/706 (28%), Gaps = 64/706 (9%) Query: 711 PVADGERLRVTGKI-------PGLRVSGGDRLQVASVSEDAMTVVVPG----RAEPATLP 759 V G++ TG + ++++ + V + + + + A Sbjct: 54 TVHKGDKFEGTGVVQLHKVYGYSIKLTATPTATIPQVKKGLIDFIKKRVSRVGMKTAKKI 113 Query: 760 VSDSPFTALKL---ENGWVETPGHSVSDSATV---FASVTQMAMDNATLNGLARSGRDVR 813 V + A+ L + + G + + ++ + + Sbjct: 114 VDELGLEAISLIEKDYKVLVNIGLTEKRAKSIQNQLVEHKRFEELATFIQSFDLESSVAI 173 Query: 814 LYSSLDETRTAEKLARHPSFTVVSEQIKTRAGETSLETAISHQKSALHTPAQQAIHLALP 873 + K+ +P ++ + ++ Sbjct: 174 RIYEDLGDTSLVKVKGNPYVVCSISKLDFTHADKIAYALGKPSDGVERIKHAILFYIEHR 233 Query: 874 VVESKKLAFSMVDLLTEAKSFAAE----------GTGFTELGGEINAQIKRGDLLYVDVA 923 + + +LL + F ++ + G L+ + Sbjct: 234 MQSKGDICIFKDELLDSLEEFIVRVGAYPKNQMISVPIQKIDAILQGLFTSGALVTEE-- 291 Query: 924 KGYGTGLLVSRASYEAEKSILRHILEG----------KEAVMPLMERVPGELMEKLTSGQ 973 G + + E +I+ + E K + ++ L Q Sbjct: 292 NNDGKVCIYRADYHRIENNIVSGLKELVHSFKTPLCQKHHIDDFIQEYEK-AYFPLAEKQ 350 Query: 974 RAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEM 1033 A M L + +++ G G GKT ++ + + ++ L PT +A M Sbjct: 351 AEAVYMALL--NGISILTGGPGTGKTQTTNTIVQCIKKVNPKA--TILLLAPTGKASKRM 406 Query: 1034 RS-AGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGG 1092 +DA T+ L + E ++ ++DE SMV + I Sbjct: 407 TELTNMDASTIHRGLGLN-SFGGTKELNQLTSDFIVVDEFSMVDAYLANKLVNNIGE-NT 464 Query: 1093 RAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELRE--AVYSLINRDVER 1150 R + GD DQL ++ PG R V + ++ RQ + Y +I+ + Sbjct: 465 RILFVGDVDQLPSVGPGLILRDLIDSGKIPVTKLDKVFRQAENSQIVMNSYKVIHGKTTK 524 Query: 1151 ALSGLE----SVKPSQVPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPM 1206 G+ + + + + + + +L D+ Sbjct: 525 DPDGIRFDHTKGDEYFIQEKNSLVIRKKIIESIQRMIDKYHYKLDDICLLSPMRIGDLGT 584 Query: 1207 TLYEAIVRDYTGRTPEAREQTL-IVTHLNEDRRVLNSMIHDVREKAGELGKEQVMVPVLN 1265 ++ + + + T +V+++ +LG V V++ Sbjct: 585 DELNRAIQLHFNPPNSSMDYQRDEFTTFRTGDKVIHTE------NNKDLGVYNGEVGVVS 638 Query: 1266 TANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAV 1325 + +GE + + D + + ++ IT+ ++G+ I Sbjct: 639 SIYTYEGEFKVDVEYPDREDPVAYTEKDMEQLQLAYA----ITIHKSQGSEFPIVIMPFH 694 Query: 1326 AEGVTLYTPDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVSGDS 1371 +++ T + I G + S + + + V+ + +S Sbjct: 695 ESQLSMSTRNLIYTGRTRAKKILISIGDEETLNKGILKVSDTNRNS 740 Score = 168 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 68/628 (10%), Positives = 174/628 (27%), Gaps = 91/628 (14%) Query: 229 VPVEAFSGRSQTIREAVGEDASLKSRDVAALDTRKSKQHVDPEIKMAEWMQTLKETGFDI 288 V + R+++I+ + E + L T ++ + + + + + Sbjct: 133 VNIGLTEKRAKSIQNQLVEH-----KRFEELATFIQSFDLESSVAIRIYEDLGDTSLVKV 187 Query: 289 RA-------YRDAADQRADLRTLTPGPASQDGPDVQQAVTQAIAGLSERKVQFT-YTDVL 340 + AD G S ++ A+ I + K + D L Sbjct: 188 KGNPYVVCSISKLDFTHADKIAYALGKPSDGVERIKHAILFYIEHRMQSKGDICIFKDEL 247 Query: 341 ARTVGILPPE----------NGVIERARAGIDEAISREQLIPLDREKGL--FTSGIHVLD 388 ++ + I++ A + + L+ + G + Sbjct: 248 LDSLEEFIVRVGAYPKNQMISVPIQKIDAILQGLFTSGALVTEENNDGKVCIYRADYHRI 307 Query: 389 ELSVRALSRDIMK------------QNRVTVHPEKSVPRTAGYSDAVSVLAQDRPSLAIV 436 E ++ + ++++ + + + + P ++AV + + ++I+ Sbjct: 308 ENNIVSGLKELVHSFKTPLCQKHHIDDFIQEYEKAYFPLAEKQAEAVYMALLNG--ISIL 365 Query: 437 SGQGGAAGQRERVAELVMMAREQGR--EVQIIAADRRSQMNMKQDERLSGELITGRRQLL 494 +G G G+ + +V ++ + ++A ++ M + + I L Sbjct: 366 TGGPG-TGKTQTTNTIVQCIKKVNPKATILLLAPTGKASKRMTELTNMDASTIHRGLGLN 424 Query: 495 -----EGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQR--TGTGSAL 547 + + ++VD+ + L++ + + + D Q G G L Sbjct: 425 SFGGTKELNQLTSDFIVVDEFSMVDAYLANKLVNNIGENTRILFVGDVDQLPSVGPGLIL 484 Query: 548 MAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQ 607 + D+G R + + V ++ Sbjct: 485 RDLIDSGKIPVTKLDKVFRQ---------AENSQIVMNSY---------KVIHGKTTKDP 526 Query: 608 AILTQAIRSELKTQGVLGLPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHD 667 + E + + + + + + + + + D Sbjct: 527 DGI---------RFDHTKGDEYFIQEKNSLVI---RKKIIESIQ-----RMIDKYHYKLD 569 Query: 668 RYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIPGL 727 + T D + + +SS R E G+++ T L Sbjct: 570 DICLLSPMRIGDLGT--DELNRAIQLHFNPPNSSMDYQRDEFTTFRTGDKVIHTENNKDL 627 Query: 728 RVSGGDRLQVASV--SEDAMTVVVPGRAEPATLPVSDSPFTALKLENGWVETPGHSVSDS 785 V G+ V+S+ E V V + ++ L+L Sbjct: 628 GVYNGEVGVVSSIYTYEGEFKVDVEYPDREDPVAYTEKDMEQLQLAYAITIHKSQGSEFP 687 Query: 786 ATVFASVT---QMAMDNATLNGLARSGR 810 + M+ N G R+ + Sbjct: 688 IVIMPFHESQLSMSTRNLIYTGRTRAKK 715 Score = 109 bits (272), Expect = 9e-22, Method: Composition-based stats. Identities = 30/187 (16%), Positives = 64/187 (34%), Gaps = 17/187 (9%) Query: 1274 LRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYT 1333 R + + D + L+ + G + + I + Sbjct: 558 QRMIDKYHYKLDDICLLSPMRIGDLGTDELNRAIQ-----------LHFNPPNSSMDYQR 606 Query: 1334 PDTIRVGTGDRMRFTKSDRERGYVANSVWTVTAVS--GDSVTLSDGQQTREI-RPGQEQA 1390 + TGD++ T+++++ G V V+++ + RE E+ Sbjct: 607 DEFTTFRTGDKVIHTENNKDLGVYNGEVGVVSSIYTYEGEFKVDVEYPDREDPVAYTEKD 666 Query: 1391 EQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNR 1450 + + LAYAIT H +QG+ I + ++ M+ Y +R K+ + + Sbjct: 667 MEQLQLAYAITIHKSQGSEFP--IVIMPFHESQLSMSTRNLIYTGRTRAKKILISI-GDE 723 Query: 1451 QGWTDAI 1457 + I Sbjct: 724 ETLNKGI 730 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.304 0.107 0.256 Lambda K H 0.267 0.0328 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 6,724,369,432 Number of Sequences: 3077464 Number of extensions: 253535207 Number of successful extensions: 1063738 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 1688 Number of HSP's successfully gapped in prelim test: 8078 Number of HSP's that attempted gapping in prelim test: 1006321 Number of HSP's gapped (non-prelim): 42696 length of query: 1756 length of database: 1,040,396,356 effective HSP length: 143 effective length of query: 1613 effective length of database: 600,319,004 effective search space: 968314553452 effective search space used: 968314553452 T: 11 A: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.6 bits) S2: 100 (43.4 bits)