94 c3ly5A_ Probab=97.49   E-value=0.0022  Score=39.02  Aligned_columns=136  Identities=18%

Q ss_pred             HHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHH-HHHHHHHHH--HHHHCCCCEEEEEECCHHHHH--
Q ss_conf             787776545406998999999999608980799972879881278-999999998--510007946999804179999--
Q batch____       957 LMERVPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQ-FRAVMSAVN--MLPESERPRVVGLGPTHRAVG-- 1031 (1756)
Q Consensus       957 l~~~~~~~~~~~Lt~~Q~~Av~~ilts~dr~~~i~G~AGTGKTT~-L~av~~~l~--~~~~~~g~~V~~lAPT~kAA~-- 1031 (1756)
                      +.......-...+++-|..|+..++.+.|  ++|+++.|+|||.. +-+++..+.  ......+..++.++||..-+.  
T Consensus        15 il~~L~~~g~~~~~~~Q~~ai~~ll~g~~--viv~a~tgsGKT~~~~l~~l~~l~~~~~~~~~~~~~iii~P~~~L~~q~   92 (211)
T c3ly5A_          15 TLKAIKEMGFTNMTEIQHKSIRPLLEGRD--LLAAAKTGSGKTLAFLIPAVELIVKLRFMPRNGTGVLILSPTRELAMQT   92 (211)
T ss_dssp             HHHHHHHTTCCBCCHHHHHHHHHHHHTCC--CEECCCTTSCHHHHHHHHHHHHHHHTTCCGGGCCCEEEECSSHHHHHHH
T ss_pred             HHHHHHHCCCCCCCHHHHHHHHHHHCCCC--EEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHH
T ss_conf             99999977899889899999999967997--9999779972258999999999973000013587427971530328999


Q ss_pred             ------------------------------HHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHH
Q ss_conf             ------------------------------99986996011898852110123455554667878999562318988999
Q batch____      1032 ------------------------------EMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMA 1081 (1756)
Q Consensus      1032 ------------------------------~L~~~Gi~a~Tias~L~~~~~~~~~~~~~~~~~~vlIVDEAsMv~~~~~~ 1081 (1756)
                                                    ......+--.|..+++...............   .+|+||+-++....+.
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~tp~~l~~~l~~~~~~~~~~l~---~iViDE~~~l~~~~~~  169 (211)
T c3ly5A_          93 FGVLKELMTHHVHTYGLIMGGSNRSAEAQKLGNGINIIVATPGRLLDHMQNTPGFMYKNLQ---CLVIDEADRILDVGFE  169 (211)
T ss_dssp             HHHHHHHTTTCCSCEEEECSSSCHHHHHHHHHHCCSEEEECHHHHHHHHHHCTTCCCTTCC---EEEECSHHHHHHTTCH
T ss_pred             HHHHHHHHHHCCCEEEEEEECCCHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCCCCC---EEEEEEHHHHCCCCHH
T ss_conf             9999998645396068887337715888840278827984668999999612532005421---8997305883245869


Q ss_pred             HHHHHHHH---CCCEEEEE
Q ss_conf             99999751---59879995
Q batch____      1082 RAYALIAA---GGGRAVAS 1097 (1756)
Q Consensus      1082 ~Ll~~a~~---~garvVlv 1097 (1756)
                      ..+..+-.   ...++|++
T Consensus       170 ~~~~~i~~~l~~~~q~v~~  188 (211)
T c3ly5A_         170 EELKQIIKLLPTRRQTMLF  188 (211)
T ss_dssp             HHHHHHHHHSCSSSEEEEE
T ss_pred             HHHHHHHHHCCCCCCEEEE
T ss_conf             9999999975999979999