161 c3hr8A_ Probab=96.89   E-value=0.026  Score=31.77  Aligned_columns=106  Identities=15%

Q ss_pred             CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCC--------CCHHHHHHHHCCCCCCC
Q ss_conf             9807999728798812789999999985100079469998041799999998699--------60118988521101234
Q batch____       984 SDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGV--------DAQTLASFLHDTQLQQR 1055 (1756)
Q Consensus       984 ~dr~~~i~G~AGTGKTT~L~av~~~l~~~~~~~g~~V~~lAPT~kAA~~L~~~Gi--------~a~Tias~L~~~~~~~~ 1055 (1756)
                      ..+++.|.|++|+||||+.-.++.....   .++..+..-+........++..|+        ...+.-..+........
T Consensus        57 ~g~iteI~G~~gsGKTtl~l~~~~~~~~---~g~~~~yid~E~~~~~~~~~~lg~d~~~il~~~~~~~e~~l~~~~~~i~  133 (342)
T c3hr8A_          57 RGRIVEIFGQESSGKTTLALHAIAEAQK---MGGVAAFIDAEHALDPVYAKNLGVDLKSLLISQPDHGEQALEIVDELVR  133 (342)
T ss_dssp             TTEEEEEEESTTSSHHHHHHHHHHHHHH---TTCCEEEEESSCCCCHHHHHHHTCCGGGCEEECCSSHHHHHHHHHHHHH
T ss_pred             CCEEEEEECCCCCCHHHHHHHHHHHHHH---CCCEEEEEECCCCCCHHHHHHHCCCHHHEEEEECCCHHHHHHHHHHHHH
T ss_conf             6607999638887789999999999984---6985999968887798889860599346789705998999999999841


Q ss_pred             CCCCCCCCCCEEEEECCCCCC---------------------HHHHHHHHHHHHHCCCEEEEE
Q ss_conf             555546678789995623189---------------------889999999975159879995
Q batch____      1056 SGETPDFSNTLFLLDESSMVG---------------------NTDMARAYALIAAGGGRAVAS 1097 (1756)
Q Consensus      1056 ~~~~~~~~~~vlIVDEAsMv~---------------------~~~~~~Ll~~a~~~garvVlv 1097 (1756)
                      .     ....++|||-.+-+.                     .+.+..|...+...++-||++
T Consensus       134 ~-----~~~~liviDSi~al~~~~~~~~~~~~~~~~~~ar~l~~~l~~L~~~a~~~~~~vi~i  191 (342)
T c3hr8A_         134 S-----GVVDLIVVDSVAALVPRAEIEGAMGDMQVGLQARLMSQALRKIAGSVNKSKAVVIFT  191 (342)
T ss_dssp             T-----SCCSEEEEECTTTCCCHHHHTTCCCSSCSSHHHHHHHHHHHHHHHHHHTSSCEEEEE
T ss_pred             C-----CCCCEEEEECHHCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_conf             0-----598389981200027310003443201468999999999999999988739739998