17 c2pjrF_ Probab=99.69   E-value=1.9e-15  Score=119.53  Aligned_columns=252  Identities=19%

Q ss_pred             HHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHC----
Q ss_conf             7654540699899999999960898079997287988127899999999851000794699980417999999986----
Q batch____       961 VPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA---- 1036 (1756)
Q Consensus       961 ~~~~~~~~Lt~~Q~~Av~~ilts~dr~~~i~G~AGTGKTT~L~av~~~l~~~~~~~g~~V~~lAPT~kAA~~L~~~---- 1036 (1756)
                      +....+.+||++|++||.    +.+...+|+|+||||||+++...+..+-......+.+|+.++||++|+++|.+.    
T Consensus         1 ~~~~~~~~L~~~Q~~av~----~~~~~~lI~g~aGsGKT~~l~~~~~~ll~~~~~~~~~iL~~t~t~~A~~~l~~rl~~~   76 (544)
T c2pjrF_           1 LSEQLLAHLNKEQQEAVR----TTEGPLLIMAGAGSGKTRVLTHRIAYLMAEKHVAPWNILAITFTNKAAREMRERVQSL   76 (544)
T ss_dssp             CTTTTTTTSCHHHHHHHH----CCSSCEEEEECTTSCHHHHHHHTHHHHTTTSCCCGGGEEEEESCHHHHTHHHHHHTTT
T ss_pred             CCHHHHHCCCHHHHHHHH----CCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHEEEECCCHHHHHHHHHHHHHH
T ss_conf             971765055889999995----7899889983899867799999999999828999777779756989999999999996


Q ss_pred             ------CCCCHHHHHHHHCCCCCCCCCC----------------------------------------------------
Q ss_conf             ------9960118988521101234555----------------------------------------------------
Q batch____      1037 ------GVDAQTLASFLHDTQLQQRSGE---------------------------------------------------- 1058 (1756)
Q Consensus      1037 ------Gi~a~Tias~L~~~~~~~~~~~---------------------------------------------------- 1058 (1756)
                            .+...|+|||............                                                    
T Consensus        77 l~~~~~~~~i~T~h~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~k~~~~~~~  156 (544)
T c2pjrF_          77 LGGAAEDVWISTFHSMCVRILRRDIDRIGINRNFSILDPTDQLSVMKTILKEKNIDPKKFEPRTILGTISAAKNELLPPE  156 (544)
T ss_dssp             SCTTSTTSEEEEHHHHHHHHHHHHGGGGTCCTTCEECCHHHHHHHHHHHHTTSCCSSSSSCHHHHHHHHHHHHTTTCCHH
T ss_pred             HHHHHCCCEEEEHHHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHH
T ss_conf             20002166897527999999998488749897880658889999999999862988021798999999999984268966


Q ss_pred             ----------------------------------------------------CCCCCCCEEEEECCCCCCHHHHHHHHHH
Q ss_conf             ----------------------------------------------------5466787899956231898899999999
Q batch____      1059 ----------------------------------------------------TPDFSNTLFLLDESSMVGNTDMARAYAL 1086 (1756)
Q Consensus      1059 ----------------------------------------------------~~~~~~~vlIVDEAsMv~~~~~~~Ll~~ 1086 (1756)
                                                                          ....+.+.++|||+--.+..+..-+..+
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~~~~~v~iDe~qd~~~~q~~il~~L  236 (544)
T c2pjrF_         157 QFAKRASTYYEKVVSDVYQEYQQRLLRNHSLDFDDLIMTTIQLFDRVPDVLHYYQYKFQYIHIDEYQDTNRAQYTLVKKL  236 (544)
T ss_dssp             HHHHSCCSSHHHHHHHHHHHHHHHHHHTTEECHHHHHHHHHHHHHHSHHHHHHHHHHCSEEEESCGGGCBHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEECCHHHCCHHHHHHHHHH
T ss_conf             75552002233689999999999988768989689999999996049899997420398899535543998999999997


Q ss_pred             HHHCCCEEEEECCHHHCCCCCCCCHHHHH----HHHCCCCEEEEHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCC
Q ss_conf             75159879995283461821268147889----84028861530224302277899899864475256887754113332
Q batch____      1087 IAAGGGRAVASGDTDQLQAIAPGQPFRLQ----QTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQ 1162 (1756)
Q Consensus      1087 a~~~garvVlvGD~~QL~aVeaG~~f~~l----~~~~~~~~~~L~ei~RQ~~~l~~av~~~~~~~~~~al~~l~~~~~~~ 1162 (1756)
                      +.. +.+++++||++|...--.|.-...+    ..........|+..+|..+++...+..+......             
T Consensus       237 ~~~-~~~l~~vGD~~Q~i~~~~g~~~~~~~~~~~~~~~~~~~~L~~~yRs~~~I~~~~n~~~~~~~~-------------  302 (544)
T c2pjrF_         237 AER-FQNICAVGDADQSIYRWRGADIQNILSFERDYPNAKVILLEQNYRSTKRILQAANEVIEHNVN-------------  302 (544)
T ss_dssp             TTT-TCCEEEEECGGGCCCTTTTBCTHHHHTHHHHCTTCEEEEECEESSSCHHHHHHHHHHHTTCSS-------------
T ss_pred             HCC-CCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCC-------------
T ss_conf             258-984999814454642225899899999997458967998288768868999999999620455-------------


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHCCCCEEEEECCHHHHHHHHH
Q ss_conf             22221100011234554322322100000000123444454457899999987750361015643897056466899999
Q batch____      1163 VPRQEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNS 1242 (1756)
Q Consensus      1163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~y~~~~~~~~~~tliia~tn~~~~~iN~ 1242 (1756)
                                      ..............................+......++........+..|++++|.....+..
T Consensus       303 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~i~~~i~~~~~~~~~~~~dIaVL~r~~~~~~~i~~  366 (544)
T c2pjrF_         303 ----------------RKPKRIWTENPEGKPILYYEAMNEADEAQFVAGRIREAVERGERRYRDFAVLYRTNAQSRVMEE  366 (544)
T ss_dssp             ----------------SCCCCCEESSCCCCCCCCCCCSSHHHHHHHHHHHHHHHHTTSSCCGGGCCCCCSSGGGSHHHHH
T ss_pred             ----------------CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHH
T ss_conf             ----------------2212331000378742442227979999999999999997589883007788178789999999


Q ss_pred             HHHH
Q ss_conf             9999
Q batch____      1243 MIHD 1246 (1756)
Q Consensus      1243 ~iR~ 1246 (1756)
                      ..+.
T Consensus       367 ~L~~  370 (544)
T c2pjrF_         367 MLLK  370 (544)
T ss_dssp             HHHH
T ss_pred             HHHH
T ss_conf             9996