13 c1pjrA_ Probab=99.87   E-value=5.2e-21  Score=156.64  Aligned_columns=418  Identities=19%

Q ss_pred             HHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHC----
Q ss_conf             7654540699899999999960898079997287988127899999999851000794699980417999999986----
Q batch____       961 VPGELMEKLTSGQRAATRMILETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA---- 1036 (1756)
Q Consensus       961 ~~~~~~~~Lt~~Q~~Av~~ilts~dr~~~i~G~AGTGKTT~L~av~~~l~~~~~~~g~~V~~lAPT~kAA~~L~~~---- 1036 (1756)
                      .+...+.+||++|++||+    +.++.++|+|+|||||||++-..+..+-........+|+.++||+.|++++.+.    
T Consensus         4 ~~~~i~~~L~~~Q~~ai~----~~~~~~lV~GppGTGKT~~l~~~i~~ll~~~~~~~~~ILv~s~tn~A~d~~~~ri~~~   79 (623)
T c1pjrA_           4 LSEQLLAHLNKEQQEAVR----TTEGPLLIMAGAGSGKTRVLTHRIAYLMAEKHVAPWNILAITFTNKAAREMRERVQSL   79 (623)
T ss_dssp             HHHHHHTTSCHHHHHHHH----CCSSCEEEEECTTSCHHHHHHHHHHHHHHTTCCCGGGEEEEESSHHHHHHHHHHHHHH
T ss_pred             HHHHHHHCCCHHHHHHHH----CCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHEEEECCCHHHHHHHHHHHHHH
T ss_conf             678987203889899995----8899789994889867799999999999808999778789746989999999999996


Q ss_pred             ------CCCCHHHHHHHHCCCCCCCCCC----------------------------------------------------
Q ss_conf             ------9960118988521101234555----------------------------------------------------
Q batch____      1037 ------GVDAQTLASFLHDTQLQQRSGE---------------------------------------------------- 1058 (1756)
Q Consensus      1037 ------Gi~a~Tias~L~~~~~~~~~~~---------------------------------------------------- 1058 (1756)
                            ++...|+|||............                                                    
T Consensus        80 ~~~~~~~~~i~T~~sf~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  159 (623)
T c1pjrA_          80 LGGAAEDVWISTFHSMCVRILRRDIDRIGINRNFSILDPTDQLSVMKTILKEKNIDPKKFEPRTILGTISAAKNELLPPE  159 (623)
T ss_dssp             HGGGGTTSEEEEHHHHHHHHHHHHGGGGTCCTTCEECCHHHHHHHHHHHHHTTSCTTTTCCHHHHHHHHHHHHHTTCCHH
T ss_pred             HCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHH
T ss_conf             10110276897527999999987288749898972779899999999999863989000788999999999975189978


Q ss_pred             -------------------------------------------------CCCCCCCEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf             -------------------------------------------------5466787899956231898899999999751
Q batch____      1059 -------------------------------------------------TPDFSNTLFLLDESSMVGNTDMARAYALIAA 1089 (1756)
Q Consensus      1059 -------------------------------------------------~~~~~~~vlIVDEAsMv~~~~~~~Ll~~a~~ 1089 (1756)
                                                                       ........+++||.......+..-+..+...
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  239 (623)
T c1pjrA_         160 QFAKRYYEKVVSDVYQEYQQRLLRNHSLDFDDLIMTTIQLFDRVPDVLHYYQYKFQYIHIDEYQDTNRAQYTLVKKLAER  239 (623)
T ss_dssp             HHTTCCHHHHHHHHHHHHHHHHHHTTEECTTHHHHHHHHHHHHCHHHHHHHHHHCSEEEESSGGGCCHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEHHHHCCCHHHHHHHHHHHCC
T ss_conf             96310268999999999999988569876014899999994159899985002487154211222998999999987156


Q ss_pred             CCCEEEEECCHHHCCCCCCCCHHHHHHHHC----CCCEEEEHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCC
Q ss_conf             598799952834618212681478898402----8861530224302277899899864475256887754113332222
Q batch____      1090 GGGRAVASGDTDQLQAIAPGQPFRLQQTRS----AADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPR 1165 (1756)
Q Consensus      1090 ~garvVlvGD~~QL~aVeaG~~f~~l~~~~----~~~~~~L~ei~RQ~~~l~~av~~~~~~~~~~al~~l~~~~~~~~~~ 1165 (1756)
                       +..+.++||+.|......+.....+....    ......|++.+|...++......................       
T Consensus       240 -~~~~~~~g~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~r~~~~i~~~~~~~~~~~~~~~~~~~~~~-------  311 (623)
T c1pjrA_         240 -FQNICAVGDADQSIYRWRGADIQNILSFERDYPNAKVILLEQNYRSTKRILQAANEVIEHNVNRKPKRIWTE-------  311 (623)
T ss_dssp             -TCCEEEEECGGGCCCGGGTCCTHHHHTHHHHSTTCEEEEECBCSSSCHHHHHHHHHHHTTCSSCCCCCCBCS-------
T ss_pred             -CCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCC-------
T ss_conf             -985999822442731114689899999997358975998063348857999985222100201000000013-------


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHCCCCEEEEECCHHHHHHHHHHHH
Q ss_conf             21100011234554322322100000000123444454457899999987750361015643897056466899999999
Q batch____      1166 QEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIH 1245 (1756)
Q Consensus      1166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~y~~~~~~~~~~tliia~tn~~~~~iN~~iR 1245 (1756)
                                            ............................+............++...+.....+.....
T Consensus       312 ----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~~~~~~i~~~l~  369 (623)
T c1pjrA_         312 ----------------------NPEGKPILYYEAMNEADEAQFVAGRIREAVERGERRYRDFAVLYRTNAQSRVMEEMLL  369 (623)
T ss_dssp             ----------------------SCCCCCEEEEEEEEHHHHHHHHHHHHHHHHTTTSCCGGGEEEEESSGGGHHHHHHHHH
T ss_pred             ----------------------CCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHH
T ss_conf             ----------------------5555772002479967899999999899998549990218998258678999999999


Q ss_pred             HHHHHCCCCCCCCCCEEHHCCCCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCC
Q ss_conf             98885676455652000010233787886424441025513430277520252025777458884056641102420013
Q batch____      1246 DVREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAV 1325 (1756)
Q Consensus      1246 ~~l~~~G~L~~~~~~~~~l~~~~~~~~~~~~~~~y~~g~~~~~~~~~~~~~v~~~~~~~~~v~~~~~~g~~~~~~~~~~~ 1325 (1756)
                      ..-...................................-.-...........................-...........
T Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  449 (623)
T c1pjrA_         370 KANIPYQIVGGLKFYDRKEIKDILAYLRVIANPDDDLSLLRIINVPKRGIGASTIDLFEALGELEMIGLGAKAAGALAAF  449 (623)
T ss_dssp             HTTCCEEEETSCCGGGSHHHHHHHHHHHHHHCTTCHHHHHHHTTSSCCTTTSCCCCCTTTTTSHHHHCCTTTTTTTTHHH
T ss_pred             HCCCCEEECCCCCHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf             75994897177323219999999999976337899789999983230389988999999632211023572257899999


Q ss_pred             CCCCCCCCCCCCEECCCCEEEEECCCHH---------------------------------------------CCCCCCC
Q ss_conf             4542122455310036975477313021---------------------------------------------5877771
Q batch____      1326 AEGVTLYTPDTIRVGTGDRMRFTKSDRE---------------------------------------------RGYVANS 1360 (1756)
Q Consensus      1326 ~~~~~~~~~~~~~l~~GD~i~~~~nd~~---------------------------------------------~g~~ng~ 1360 (1756)
                      ...+.-+..........+.+.....+..                                             ....+++
T Consensus       450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  529 (623)
T c1pjrA_         450 RSQLEQWTQLQEYVSVTELVEEVLDKSGYREMLKAERTIEAQSRLENLDEFLSVTKHFENVSDDKSLIAFLTDLALISGD  529 (623)
T ss_dssp             HHHHHHHHHHTTTSCHHHHHHHHHHHTSHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHCSCCCHHHHHHHTTTCCCC
T ss_pred             HHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
T ss_conf             99999999730138889999999986292878852036325889999999999999986204611489999863115798


Q ss_pred             EEEEEEECCCEEEEEECCCCEEEECCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCC----------HH
Q ss_conf             69999714983899976880577315542222611245543200044853479999507766310148----------77
Q batch____      1361 VWTVTAVSGDSVTLSDGQQTREIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGNRKLMAG----------FE 1430 (1756)
Q Consensus      1361 ~~~V~~i~~~~i~~~~~~~~~~~~~~~~~~~~~ld~aYA~TvHkaQG~T~d~Vi~~~~~~~~~~~l~~----------~~ 1430 (1756)
                      ...|.                                   |||++||.++|.||++...++......+          ++
T Consensus       530 ~V~v~-----------------------------------Tvh~~kG~E~D~Vii~~~~~~~~p~~~~~~~~~~l~eerR  574 (623)
T c1pjrA_         530 AVMLM-----------------------------------TLHAAKGLEFPVVFLIGMEEGIFPHNRSLEDDDEMEEERR  574 (623)
T ss_dssp             CEEEE-----------------------------------EGGGGTTCCEEEEEECCCBTBTTTBGGGGTCHHHHHHHHH
T ss_pred             CEEEE-----------------------------------ECCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHH
T ss_conf             38999-----------------------------------5233275758878994375573753111499678888998


Q ss_pred             HHHHHHHHCCEEEEEEE
Q ss_conf             87776642232379997
Q batch____      1431 SAYVALSRMKQHVQVYT 1447 (1756)
Q Consensus      1431 ~~YVaiTRar~~~~iyt 1447 (1756)
                      +|||||||||+++.|++
T Consensus       575 LlYVAiTRAk~~L~i~~  591 (623)
T c1pjrA_         575 LAYVGITRAEEELVLTS  591 (623)
T ss_dssp             HHHHHHTTEEEEEEEEE
T ss_pred             HHHHHHCCHHCEEEEEE
T ss_conf             99995111001489981