69 c1a1vA_ Probab=97.69   E-value=0.00076  Score=42.04  Aligned_columns=102  Identities=20%

Q ss_pred             HCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHC----------------------CC
Q ss_conf             60898079997287988127899999999851000794699980417999999986----------------------99
Q batch____       981 LETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSA----------------------GV 1038 (1756)
Q Consensus       981 lts~dr~~~i~G~AGTGKTT~L~av~~~l~~~~~~~g~~V~~lAPT~kAA~~L~~~----------------------Gi 1038 (1756)
                      +..++++.+|+++-|+|||+.+...+.       ..|.+|+.++|+..++..+.+.                      -|
T Consensus         4 ~~~~~q~~il~apTGsGKT~~~~~~~~-------~~g~~vlvl~P~r~La~~~~~~l~~~~g~~~~~~~~~~~~~~~~~I   76 (429)
T c1a1vA_           4 VPQSFQVAHLHAPTGSGKSTKVPAAYA-------AQGYKVLVLNPSVAATLGFGAYMSKAHGVDPNIRTGVRTITTGSPI   76 (429)
T ss_dssp             CCSSCEEEEEECCTTSCTTTHHHHHHH-------TTTCCEEEEESCHHHHHHHHHHHHHHHSCCCEEECSSCEECCCCSE
T ss_pred             CCCCCCEEEEECCCCCCHHHHHHHHHH-------HCCCEEEEECCHHHHHHHHHHHHHHHHCCCHHHHCCCEEEECCCCE
T ss_conf             400197699985898878899999999-------7797799984638998999999997518450122164761479868


Q ss_pred             CCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECC---CCCCHHHHHHHHHHHHHCC-CEEEEE
Q ss_conf             6011898852110123455554667878999562---3189889999999975159-879995
Q batch____      1039 DAQTLASFLHDTQLQQRSGETPDFSNTLFLLDES---SMVGNTDMARAYALIAAGG-GRAVAS 1097 (1756)
Q Consensus      1039 ~a~Tias~L~~~~~~~~~~~~~~~~~~vlIVDEA---sMv~~~~~~~Ll~~a~~~g-arvVlv 1097 (1756)
                      .-.|...++.        ........+++||||+   +..+...+..+.......+ .++|++
T Consensus        77 ~v~T~~~ll~--------~~~~l~~~~~VIiDEaH~~~~~~~~~~~~~~~~~~~~~~~~~i~~  131 (429)
T c1a1vA_          77 TYSTYGKFLA--------DGGSGGAYDIIICDECHSTDATSILGIGTVLDQAETAGARLVVLA  131 (429)
T ss_dssp             EEEEHHHHHH--------TTCCCCCCSEEEEETTTCCSHHHHHHHHHHHHHTTTTTCSEEEEE
T ss_pred             EEECCCHHHC--------CCCCCCCCCEEEECHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEE
T ss_conf             9997118743--------742026731798304520342221256888876311888379998