Phyre 2 alignment of P0CF64 with d1l3la1

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Job Description | P0CF64
Confidence | 92.78% | Date | Thu Jan 5 11:31:22 GMT 2012
Rank | 61 | Aligned Residues | 37
% Identity | 24% | Template | d1l3la1
SCOP info | DNA/RNA-binding 3-helical bundle | C-terminal effector domain of the bipartite response regulators | GerE-like (LuxR/UhpA family of transcriptional regulators)
Resolution | 1.66

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | W | T | G | K | K | V | D | S | A | R | A | L | I | A | R | G | W | G | V | S | L | V | S | R | C | L | R | V | S | R | A | Q | L | H | V | I | L | R
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | D | P | K | E | A | T | Y | L | R | . | W | I | A | V | G | K | T | X | E | E | I | A | D | V | E | G | V | K | Y | N | S | V | R | V | K | L | R
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  | . |  |  | T | T | T |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 174 | . | . | . | . | . | 180 | . | . | . |  | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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