16/01/2012 04:25:56 : INFO  : Run start: Mon Jan 16 04:25:54 GMT 2012
16/01/2012 04:26:05 : INFO  : Initialised job
16/01/2012 04:26:08 : INFO  : Renaming log file 'phyre2_20120116_042553.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/ec1d332d9030e7e6/phyre_20120116_042553.log'
16/01/2012 04:26:10 : INFO  : Initialised job:
Sequence
>batch____
MWTGKKVDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLL
RIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKR
AHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQD
VMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAE
SFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLS
DNRCLEI

16/01/2012 04:26:12 : INFO  : Checked sequence
16/01/2012 04:26:18 : INFO  : Finding homologues with PSI-BLAST
16/01/2012 04:26:19 : INFO  : PSI-BLAST 3 iterations
16/01/2012 04:28:04 : INFO  : PSI-BLAST 5 iterations
16/01/2012 04:31:54 : INFO  : Finished PSI-BLAST
16/01/2012 04:32:01 : INFO  : Running Buildali to generate a3m file
16/01/2012 04:44:20 : INFO  : Converting to HMM
16/01/2012 04:44:26 : INFO  : Calibrating HMM
16/01/2012 04:44:48 : INFO  : Searching HMM database
16/01/2012 04:50:28 : INFO  : Finished buildali
16/01/2012 04:50:32 : INFO  : Predicting secondary structure
16/01/2012 04:50:48 : INFO  : Predicted secondary structure (PSI-Pred)
16/01/2012 04:50:51 : INFO  : Predicting Disordered regions
16/01/2012 04:50:58 : INFO  : Predicted Disorder (Disopred)
16/01/2012 04:51:01 : INFO  : Running memsat_svm check
16/01/2012 04:54:39 : INFO  : Globular protein
16/01/2012 04:54:41 : INFO  : Predicted Transmembrane (memsat_svm) ID 'ec1d332d9030e7e6'
16/01/2012 04:54:45 : INFO  : Initialising fold library search
16/01/2012 04:54:51 : INFO  : Initialised search input
16/01/2012 04:54:56 : INFO  : Building Ensemble models
16/01/2012 04:55:02 : INFO  : Building hh.c3f9kV_.model.1.pdb
16/01/2012 04:55:32 : INFO  : Building hh.d1asua_.model.2.pdb
16/01/2012 04:55:56 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/ec1d332d9030e7e6/hh.d1asua_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/ec1d332d9030e7e6/d1asua_.2.pdb
16/01/2012 04:56:04 : INFO  : Building hh.c1c0mA_.model.3.pdb
16/01/2012 04:56:27 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/ec1d332d9030e7e6/hh.c1c0mA_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/ec1d332d9030e7e6/c1c0mA_.3.pdb
16/01/2012 04:56:35 : INFO  : Building hh.d1c0ma2.model.4.pdb
16/01/2012 04:56:59 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/ec1d332d9030e7e6/hh.d1c0ma2.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/ec1d332d9030e7e6/d1c0ma2.4.pdb
16/01/2012 04:57:07 : INFO  : Building hh.d1bcoa2.model.5.pdb
16/01/2012 04:57:30 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/ec1d332d9030e7e6/hh.d1bcoa2.model.5.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/ec1d332d9030e7e6/d1bcoa2.5.pdb
16/01/2012 04:57:37 : INFO  : Building hh.c3nf9A_.model.6.pdb
16/01/2012 04:57:58 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/ec1d332d9030e7e6/hh.c3nf9A_.model.6.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/ec1d332d9030e7e6/c3nf9A_.6.pdb
16/01/2012 04:58:06 : INFO  : Building hh.c3hosA_.model.7.pdb
16/01/2012 04:58:30 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/ec1d332d9030e7e6/hh.c3hosA_.model.7.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/ec1d332d9030e7e6/c3hosA_.17.pdb
16/01/2012 04:58:38 : INFO  : Building hh.c2elhA_.model.8.pdb
16/01/2012 04:59:03 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/ec1d332d9030e7e6/hh.c2elhA_.model.8.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/ec1d332d9030e7e6/c2elhA_.35.pdb
16/01/2012 04:59:10 : INFO  : Building c3f9kV_.1.pdb
16/01/2012 04:59:40 : INFO  : Building d1asua_.2.pdb
16/01/2012 05:00:06 : INFO  : Building c1c0mA_.3.pdb
16/01/2012 05:00:34 : INFO  : Building d1c0ma2.4.pdb
16/01/2012 05:01:00 : INFO  : Building d1bcoa2.5.pdb
16/01/2012 05:01:26 : INFO  : Building c3nf9A_.6.pdb
16/01/2012 05:01:53 : INFO  : Building d1exqa_.7.pdb
16/01/2012 05:02:20 : INFO  : Building c1ex4A_.8.pdb
16/01/2012 05:02:48 : INFO  : Building c3kksB_.9.pdb
16/01/2012 05:03:16 : INFO  : Building d1cxqa_.10.pdb
16/01/2012 05:03:43 : INFO  : Building c1bcoA_.11.pdb
16/01/2012 05:04:13 : INFO  : Building d1hyva_.12.pdb
16/01/2012 05:04:40 : INFO  : Building c1k6yB_.13.pdb
16/01/2012 05:05:10 : INFO  : Building c3hpgC_.14.pdb
16/01/2012 05:05:38 : INFO  : Building d1c6va_.15.pdb
16/01/2012 05:06:04 : INFO  : Building c3l2tB_.16.pdb
16/01/2012 05:06:33 : INFO  : Building c3hosA_.17.pdb
16/01/2012 05:07:00 : INFO  : Building c3dlrA_.18.pdb
16/01/2012 05:07:28 : INFO  : Building c6paxA_.19.pdb
16/01/2012 05:07:55 : INFO  : Building d1pdnc_.20.pdb
16/01/2012 05:12:17 : INFO  : Finished HH model building
16/01/2012 05:12:21 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
16/01/2012 05:14:04 : INFO  : html domain output complete ID 'ec1d332d9030e7e6'
16/01/2012 05:46:21 : INFO  : Run end  : Mon Jan 16 05:46:18 GMT 2012
