BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (130 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_Q46755 Protein sirB2 n=63 Tax=Enterobacteriaceae RepID=... 254 4e-67 UniRef50_P0A238 Protein sirB2 n=80 Tax=Gammaproteobacteria RepID... 171 8e-42 UniRef50_C9XTV6 Protein sirB2 n=4 Tax=Enterobacteriaceae RepID=C... 143 2e-33 UniRef50_Q3J8K9 Invasion gene expression up-regulator, SirB n=2 ... 70 2e-11 UniRef50_B5FBX2 Transcriptional regulator n=49 Tax=Vibrionales R... 65 9e-10 UniRef50_Q2Y7A0 Invasion gene expression up-regulator, SirB n=4 ... 62 6e-09 UniRef50_Q47Y96 SirB family protein n=1 Tax=Colwellia psychreryt... 61 1e-08 UniRef50_Q2SBR9 Uncharacterized protein conserved in bacteria n=... 60 2e-08 UniRef50_Q5P0W4 Predicted Invasion gene expression up-regulator,... 59 4e-08 UniRef50_A1WZQ3 Invasion gene expression up-regulator, SirB n=1 ... 58 8e-08 UniRef50_B1Y4A7 Invasion gene expression up-regulator SirB n=2 T... 57 2e-07 UniRef50_UPI0000E0E158 invasion gene expression up-regulator, Si... 55 7e-07 UniRef50_Q15SR2 Invasion gene expression up-regulator, SirB n=1 ... 55 8e-07 UniRef50_A4BQT9 Putative uncharacterized protein n=1 Tax=Nitroco... 55 9e-07 UniRef50_Q2BLP8 Putative membrane protein n=1 Tax=Neptuniibacter... 54 2e-06 UniRef50_A0KT91 Invasion gene expression up-regulator, SirB n=28... 54 2e-06 UniRef50_B4S0W7 Invasion gene expression up-regulator, SirB n=1 ... 54 2e-06 UniRef50_C7RNU8 Invasion gene expression up-regulator SirB n=1 T... 52 5e-06 UniRef50_C6P0M9 Invasion gene expression up-regulator SirB n=1 T... 51 1e-05 UniRef50_Q5QV01 Uncharacterized conserved membrane protein n=2 T... 51 1e-05 UniRef50_B4RK15 Regulator n=25 Tax=Neisseria RepID=B4RK15_NEIG2 50 2e-05 UniRef50_A4SSR6 Membrane protein n=4 Tax=Gammaproteobacteria Rep... 49 3e-05 UniRef50_B4RSV2 Invasion gene expression up-regulator, SirB n=2 ... 49 3e-05 UniRef50_C4GIH0 Putative uncharacterized protein n=1 Tax=Kingell... 49 4e-05 UniRef50_C1D4W3 Invasion gene expression up-regulator, SirB n=1 ... 49 5e-05 UniRef50_C0DTE2 Putative uncharacterized protein n=1 Tax=Eikenel... 48 9e-05 UniRef50_Q21X92 Invasion gene expression up-regulator, SirB n=2 ... 48 1e-04 UniRef50_Q1N6F9 Invasion gene expression up-regulator, SirB n=1 ... 47 1e-04 UniRef50_Q21KQ5 Invasion gene expression up-regulator, SirB n=1 ... 46 4e-04 UniRef50_D0KXB0 Invasion gene expression up-regulator SirB n=1 T... 46 4e-04 UniRef50_C7R602 Invasion gene expression up-regulator SirB n=1 T... 45 7e-04 UniRef50_B3PJ86 Putative membrane protein n=1 Tax=Cellvibrio jap... 45 8e-04 UniRef50_A1U5E9 Invasion gene expression up-regulator, SirB n=2 ... 45 8e-04 UniRef50_Q0F0D8 Putative uncharacterized protein n=1 Tax=Maripro... 44 0.001 UniRef50_Q7MFW3 Uncharacterized protein conserved in bacteria n=... 43 0.003 UniRef50_B0BP11 Putative uncharacterized protein n=6 Tax=Pasteur... 42 0.005 UniRef50_A4SK66 Transcriptional regulator n=2 Tax=Aeromonas RepI... 42 0.005 UniRef50_C5BLU0 Protein SirB n=1 Tax=Teredinibacter turnerae T79... 42 0.006 UniRef50_A2SGG2 Putative uncharacterized protein n=1 Tax=Methyli... 42 0.007 UniRef50_Q3IK93 Putative uncharacterized protein n=2 Tax=Alterom... 42 0.008 UniRef50_B9YZ33 Invasion gene expression up-regulator SirB n=2 T... 41 0.013 UniRef50_A6FEA7 Putative membrane protein n=1 Tax=Moritella sp. ... 40 0.030 UniRef50_A4BIA2 Putative uncharacterized protein n=1 Tax=Reineke... 40 0.032 UniRef50_Q65SI4 Putative uncharacterized protein n=1 Tax=Mannhei... 39 0.039 >UniRef50_Q46755 Protein sirB2 n=63 Tax=Enterobacteriaceae RepID=SIRB2_ECOLI Length = 130 Score = 254 bits (650), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 130/130 (100%), Positives = 130/130 (100%) Query: 1 MTSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALM 60 MTSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALM Sbjct: 1 MTSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALM 60 Query: 61 AKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIK 120 AKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIK Sbjct: 61 AKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIK 120 Query: 121 LATTKVPLLG 130 LATTKVPLLG Sbjct: 121 LATTKVPLLG 130 >UniRef50_P0A238 Protein sirB2 n=80 Tax=Gammaproteobacteria RepID=SIRB2_SALTI Length = 129 Score = 171 bits (432), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 94/128 (73%), Positives = 105/128 (82%) Query: 3 SFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAK 62 + + LL++HLI +ALSV L R+W RY H A ARWTRIVPPV+DTLLLLSGI L+ K Sbjct: 2 TIAMLLTLHLICVALSVSLFVARYWWRYCGHALAAARWTRIVPPVIDTLLLLSGIGLIVK 61 Query: 63 AHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLA 122 HILPF+ WLTEKLFGVIIYIVLGFIALDYR+ SQQAR IAFPLALVVLYIIIKLA Sbjct: 62 THILPFTESGSWLTEKLFGVIIYIVLGFIALDYRQARSQQARFIAFPLALVVLYIIIKLA 121 Query: 123 TTKVPLLG 130 TTK+PLLG Sbjct: 122 TTKIPLLG 129 >UniRef50_C9XTV6 Protein sirB2 n=4 Tax=Enterobacteriaceae RepID=C9XTV6_CROTZ Length = 131 Score = 143 bits (360), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 75/130 (57%), Positives = 95/130 (73%), Gaps = 1/130 (0%) Query: 1 MTSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALM 60 M ++ + +H++++ +S+ L LR+W +Y+ P + RW RIVP V DT+LL SG+AL+ Sbjct: 1 MAAYFAVKHLHILTVVISISLFILRYWWQYRSSPMSSKRWVRIVPHVNDTVLLGSGVALV 60 Query: 61 AKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIK 120 H PF+ Q WLTEKLFGVIIYIVLGFIAL RR SQQ R IAF L LVVLYII+K Sbjct: 61 LITHFYPFTPQGAWLTEKLFGVIIYIVLGFIALG-RRPRSQQVRWIAFLLGLVVLYIIVK 119 Query: 121 LATTKVPLLG 130 LATTK+PLLG Sbjct: 120 LATTKIPLLG 129 >UniRef50_Q3J8K9 Invasion gene expression up-regulator, SirB n=2 Tax=Nitrosococcus oceani RepID=Q3J8K9_NITOC Length = 129 Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 49/128 (38%), Positives = 70/128 (54%), Gaps = 6/128 (4%) Query: 1 MTSFSTLLSVHLISIALSVGLLTLR-FWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIAL 59 MT + TL +HL S+ ++ L R W+ H RW R+VPP+VDT+LL S I L Sbjct: 2 MTVYLTLKYIHLTSVVTTLVLFVGRGLWMLSSSHYLQ-RRWVRLVPPIVDTVLLASAIGL 60 Query: 60 MAKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIII 119 H PF WLT K+ +I YIV G IAL Y R ++ RI A +A+++ ++ Sbjct: 61 TLVLHQYPFVN--DWLTAKILALIGYIVFGSIALKYGR--TRSVRIGAGCIAMILFTYMV 116 Query: 120 KLATTKVP 127 +A +K P Sbjct: 117 WVARSKTP 124 >UniRef50_B5FBX2 Transcriptional regulator n=49 Tax=Vibrionales RepID=B5FBX2_VIBFM Length = 127 Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 40/124 (32%), Positives = 69/124 (55%), Gaps = 2/124 (1%) Query: 4 FSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKA 63 ++ + +HL+ +A SV +R+ L + + VP VVD+ +LLSGI L+ Sbjct: 2 YTAVKHIHLLLVACSVLFFVVRYCLMMANSDIRNNGFFKRVPHVVDSAMLLSGIWLIFIT 61 Query: 64 HILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLAT 123 +PF+ A WLTEK+ +++Y+ LG + L+ + ++ + AF A+ L + K+A Sbjct: 62 GFIPFTSSAPWLTEKITCIMVYLALGVVTLNNGK--NKVFKTFAFLGAMGWLMVAAKIAV 119 Query: 124 TKVP 127 TKVP Sbjct: 120 TKVP 123 >UniRef50_Q2Y7A0 Invasion gene expression up-regulator, SirB n=4 Tax=Nitrosomonadaceae RepID=Q2Y7A0_NITMU Length = 129 Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 43/125 (34%), Positives = 68/125 (54%), Gaps = 4/125 (3%) Query: 3 SFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAK 62 S++ + +H+ S+ +S L +LR Q RW +I P VVDT+LL S +AL + Sbjct: 2 SYAVIKMIHVGSVIISYLLFSLRSIWMIQGSADLKRRWVKITPHVVDTVLLASAVALAVR 61 Query: 63 AHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLA 122 H P WL+ K+ G+++YI LG AL + + +++A+I A A V I+ +A Sbjct: 62 IHQDPV--HDSWLSAKVVGLLLYIGLGMTALRFGK--TRKAKISACVAAQFVFIYIVLVA 117 Query: 123 TTKVP 127 TK P Sbjct: 118 LTKNP 122 >UniRef50_Q47Y96 SirB family protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47Y96_COLP3 Length = 121 Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 39/116 (33%), Positives = 60/116 (51%), Gaps = 4/116 (3%) Query: 10 VHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKAHILPFS 69 +H+ LS+ L T RF L +W +I P V+DT LL++GI+L K H+ P Sbjct: 4 LHITLAVLSISLFTYRFILTLMASKNLDRKWLKISPHVIDTFLLIAGISLAVKLHLNPM- 62 Query: 70 GQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLATTK 125 + WL EK+ + YI G+ L R Q I+ F A+ + +I++LA T+ Sbjct: 63 -EQMWLAEKILALFAYIFTGYYTLKLARNRPMQ--ILGFLGAMGWVMLIVRLAITR 115 >UniRef50_Q2SBR9 Uncharacterized protein conserved in bacteria n=3 Tax=Proteobacteria RepID=Q2SBR9_HAHCH Length = 127 Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 43/123 (34%), Positives = 65/123 (52%), Gaps = 4/123 (3%) Query: 3 SFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAK 62 S+ L +H+ +AL+ TLRF P + ++++P ++DTLLLLS I L K Sbjct: 2 SYMLLKHIHMTCVALTFASFTLRFIWMILGSPLLQHKLSKVLPHIIDTLLLLSAIGLALK 61 Query: 63 AHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLA 122 PF WLT K+ G+IIYI LG AL +R +++ R++ A I+ +A Sbjct: 62 LQQYPF--HNGWLTAKVVGLIIYIALGVFAL--KRGKTKRTRVLFGLGAYTAFAYIVMVA 117 Query: 123 TTK 125 TK Sbjct: 118 LTK 120 >UniRef50_Q5P0W4 Predicted Invasion gene expression up-regulator, SirB n=2 Tax=Rhodocyclaceae RepID=Q5P0W4_AZOSE Length = 131 Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 45/123 (36%), Positives = 68/123 (55%), Gaps = 6/123 (4%) Query: 4 FSTLLSVHLISIALS-VGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAK 62 ++ + +H++ LS G L W+ ++ P R TR+VP VVDT+ L S I L Sbjct: 2 YAAIKHLHILCAMLSGSGFLLQGIWMM-RRSPLLDHRATRVVPHVVDTVFLASAITLAVL 60 Query: 63 AHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLA 122 + PF A W+T K+ G+++Y+VLG+IAL R + RI A AL+V I+ +A Sbjct: 61 SAQYPF--VAPWVTAKVIGLVVYVVLGYIAL--RGGATMGIRIFALICALLVFSWIVSVA 116 Query: 123 TTK 125 TK Sbjct: 117 LTK 119 >UniRef50_A1WZQ3 Invasion gene expression up-regulator, SirB n=1 Tax=Halorhodospira halophila SL1 RepID=A1WZQ3_HALHL Length = 128 Score = 58.2 bits (139), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 44/123 (35%), Positives = 64/123 (52%), Gaps = 4/123 (3%) Query: 7 LLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKAHIL 66 LLS H+++ S+GL R L ++ + R+ P V DT+LLL+ + LM Sbjct: 5 LLSTHVLAAVASLGLFIARGILMFRGSAALDHKVLRVAPRVADTVLLLTAVVLMVMIAQY 64 Query: 67 PFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLATTKV 126 PF WLT KL G+I YI LG +AL R + R+ AF +VV+ + + T+ Sbjct: 65 PFVD--GWLTVKLLGLIAYIALGVVALG--RSRPRPIRMAAFVGGIVVIGYLYLYSVTRE 120 Query: 127 PLL 129 PLL Sbjct: 121 PLL 123 >UniRef50_B1Y4A7 Invasion gene expression up-regulator SirB n=2 Tax=Burkholderiales RepID=B1Y4A7_LEPCP Length = 133 Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 41/125 (32%), Positives = 63/125 (50%), Gaps = 4/125 (3%) Query: 3 SFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAK 62 + TL +H ++ LS+G LR W R + +P ++D++LL S I L Sbjct: 5 DYLTLKLIHQSAVVLSIGGFVLRGWASLNGQAWVRGRAAKTLPHLIDSVLLASAITLAWL 64 Query: 63 AHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLA 122 A ++P+ WL K+ G+++YI LG IAL R + R A+ ALV I+ +A Sbjct: 65 AGLVPW--HTPWLMSKIVGLLVYIGLGMIALKPGR--DLRLRWAAWLGALVTFGFIVSVA 120 Query: 123 TTKVP 127 TK P Sbjct: 121 ITKQP 125 >UniRef50_UPI0000E0E158 invasion gene expression up-regulator, SirB n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E0E158 Length = 123 Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 38/125 (30%), Positives = 69/125 (55%), Gaps = 4/125 (3%) Query: 4 FSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKA 63 + L +HL ++ALS+ LTL+ A+W +++P ++ T+L+++ I+L Sbjct: 2 YEGLKHLHLTAVALSLLFLTLQVIAHIFDTKMKDAKWLKVLPHIIHTVLIVTAISLCVIL 61 Query: 64 HILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLAT 123 PF W+T KL G++ YI+L +A+ + R + R+ AF A+ L + K+A Sbjct: 62 AQYPFVHD--WVTSKLIGLVAYILLAVLAVKWAR--TNAMRVFAFLGAVAWLGLTAKVAF 117 Query: 124 TKVPL 128 +K+PL Sbjct: 118 SKMPL 122 >UniRef50_Q15SR2 Invasion gene expression up-regulator, SirB n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15SR2_PSEA6 Length = 125 Score = 55.1 bits (131), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 4/120 (3%) Query: 10 VHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKAHILPFS 69 +HL IALSV L +RF+ +W +I P +VDTLL+LS L PF Sbjct: 8 IHLTCIALSVLLFVIRFFWTMTSSSMLQKKWVKITPHIVDTLLILSAATLCVMISQYPFV 67 Query: 70 GQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLATTKVPLL 129 W+TEK G+++Y+ + +AL + + R++ AL + +A +K P+L Sbjct: 68 --TPWVTEKFVGLLMYVFM--VALALKMARTNFMRVVGLVGALSWIAFTALVAISKQPIL 123 >UniRef50_A4BQT9 Putative uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BQT9_9GAMM Length = 96 Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 3/89 (3%) Query: 39 RWTRIVPPVVDTLLLLSGIALMAKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRM 98 RW R++P +D ++L SG+ L + P + W+ KL G++ Y+VLG IAL RR Sbjct: 11 RWVRVLPHAIDAVVLASGLYLAVAFYEFPLTYH-PWIIAKLTGLLAYVVLGAIAL--RRG 67 Query: 99 HSQQARIIAFPLALVVLYIIIKLATTKVP 127 +++ R+ AF +L++ I+ +A TK+P Sbjct: 68 RTKRVRVAAFVGSLLLFGYIVFVAVTKMP 96 >UniRef50_Q2BLP8 Putative membrane protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BLP8_9GAMM Length = 125 Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 41/121 (33%), Positives = 62/121 (51%), Gaps = 8/121 (6%) Query: 10 VHLISIALSVGLLTLR-FWLRYQ-KHPQAFARWTRIVPPVVDTLLLLSGIALMAKAHILP 67 +HL I LS+ L LR +W + H Q +W ++VP +DTLLL+S I L A P Sbjct: 8 IHLTCIVLSLSLFLLRGYWALFSPSHLQR--KWVKVVPHCIDTLLLISAITLAALLQQYP 65 Query: 68 FSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLATTKVP 127 F WLT K+ ++ YI GF +R ++ ++ + LAL+ I+ +A P Sbjct: 66 FID--HWLTAKVVALLAYI--GFGTFAIKRGKTRSSKALFLVLALLCFGYIVVVAINHNP 121 Query: 128 L 128 L Sbjct: 122 L 122 >UniRef50_A0KT91 Invasion gene expression up-regulator, SirB n=28 Tax=Gammaproteobacteria RepID=A0KT91_SHESA Length = 131 Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 45/119 (37%), Positives = 61/119 (51%), Gaps = 4/119 (3%) Query: 11 HLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKAHILPFSG 70 HL IA+SV +RF L ++ + +I P V+DT LLLSG+ L PF Sbjct: 15 HLTLIAVSVLFFVVRFVLHLRQSALMGKKVFKIAPHVIDTFLLLSGLTLCFMIKQYPFVD 74 Query: 71 QAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLATTKVPLL 129 WLTEK+ V+ YI LG IA+ R ++ ++ AF AL L KLA K +L Sbjct: 75 --PWLTEKIGAVLAYIALGVIAIKANR--NKLFKVFAFLGALGWLVYAAKLAHFKQAVL 129 >UniRef50_B4S0W7 Invasion gene expression up-regulator, SirB n=1 Tax=Alteromonas macleodii 'Deep ecotype' RepID=B4S0W7_ALTMD Length = 112 Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 34/88 (38%), Positives = 53/88 (60%), Gaps = 4/88 (4%) Query: 38 ARWTRIVPPVVDTLLLLSGIALMAKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRR 97 ++W + +P V+DTLLL S +ALM P+ W+ K+ +++YIVLG IAL +R Sbjct: 26 SKWVKTIPHVIDTLLLSSAVALMIMTGFYPW--ILDWVAAKILLLLLYIVLGTIAL--KR 81 Query: 98 MHSQQARIIAFPLALVVLYIIIKLATTK 125 ++ RI AF AL+ + +I K A +K Sbjct: 82 GKTKAQRIAAFIAALICIGLIFKSALSK 109 >UniRef50_C7RNU8 Invasion gene expression up-regulator SirB n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNU8_9PROT Length = 130 Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 14/111 (12%) Query: 20 GLLTLR--FWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKAHILPFSGQAQWLTE 77 G+ TLR WLR R+ P V+DT+LL S +A+ + PFS A WLT Sbjct: 25 GVWTLRQSSWLRRPA--------VRVWPHVIDTVLLASAVAMAVMSTQYPFS--ANWLTA 74 Query: 78 KLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLATTKVPL 128 KL G++IYI G +AL R ++Q R F AL+ I+ +A T+ PL Sbjct: 75 KLIGLLIYIGCGTMALKRARHNAQ--RAAFFAAALLAFAYIVSVALTRNPL 123 >UniRef50_C6P0M9 Invasion gene expression up-regulator SirB n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P0M9_9PROT Length = 139 Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 64/119 (53%), Gaps = 4/119 (3%) Query: 10 VHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKAHILPFS 69 VH+ + LS L LR + W ++ P +VDT L+LS I L + I P + Sbjct: 20 VHIGCVILSYSLFFLRGVWMLRDSSSLQQHWVKVAPHIVDTALILSAITLAWQLGISPLA 79 Query: 70 GQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLATTKVPL 128 A WL K+ +++YI +G +AL + +++ R+I++ +A ++ + ++ +A T PL Sbjct: 80 --APWLAAKIVALLLYIAVGMMALKLGK--TKRVRLISWLMAQLLFFYMVSVAVTHDPL 134 >UniRef50_Q5QV01 Uncharacterized conserved membrane protein n=2 Tax=Idiomarina RepID=Q5QV01_IDILO Length = 124 Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 5/90 (5%) Query: 40 WTRIVPPVVDTLLLLSGIALMAKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMH 99 W +IVP V DTLLLLS + +M + P Q WLT+K+ GVI YI G +A+ + Sbjct: 38 WLKIVPHVNDTLLLLSAVGIMVTLSMYPI--QVPWLTDKVIGVIAYIGFGVLAMKGK--- 92 Query: 100 SQQARIIAFPLALVVLYIIIKLATTKVPLL 129 + AR + F A + ++ +A +K L+ Sbjct: 93 TAGARWLGFIGACGWIAFLLHVAVSKQALI 122 >UniRef50_B4RK15 Regulator n=25 Tax=Neisseria RepID=B4RK15_NEIG2 Length = 124 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 33/116 (28%), Positives = 62/116 (53%), Gaps = 4/116 (3%) Query: 11 HLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKAHILPFSG 70 H I + +++ + +RF+L ++ + + + +P + DT+LL +G+ LM H PF+ Sbjct: 10 HQIFVTITILVFNIRFFLLWKNPEKPLVGFWKALPHLNDTMLLFTGLWLMKITHFSPFN- 68 Query: 71 QAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLATTKV 126 A WL K+ + YI LG + + R ++ + + LA+ + I+ LA TKV Sbjct: 69 -APWLGTKILLLFAYIALGMVMMRARPRSTKFYTV--YLLAMCCIACIVYLAKTKV 121 >UniRef50_A4SSR6 Membrane protein n=4 Tax=Gammaproteobacteria RepID=A4SSR6_AERS4 Length = 128 Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 40/116 (34%), Positives = 58/116 (50%), Gaps = 5/116 (4%) Query: 10 VHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKAHILPFS 69 +H+ +S+ L R+ L P+ RW +I P V DT LLL G+ L + P Sbjct: 11 LHMTLAIVSLLLFVYRWMLSLNASPRLQQRWLKIAPHVNDTFLLLFGVLLAVTLQMSP-- 68 Query: 70 GQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLATTK 125 Q WL KL +++YI LG +AL R SQ +++A AL V ++ A TK Sbjct: 69 SQQPWLMAKLIALVVYIGLGVMALK-RPARSQ--KLMAGVAALAVFGYMVGAAMTK 121 >UniRef50_B4RSV2 Invasion gene expression up-regulator, SirB n=2 Tax=Alteromonas macleodii RepID=B4RSV2_ALTMD Length = 114 Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 6/119 (5%) Query: 12 LISIALSVGLLTLRF-WLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKAHILPFSG 70 + ++ LS+ RF W ++ + +W +I+P ++DT+LL S I L P Sbjct: 1 MTAVGLSILFFIFRFIWSQFDATALS-KKWVKILPHIIDTVLLASAIWLCFILSQYPIVN 59 Query: 71 QAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLATTKVPLL 129 WLT K+ GV++YIV G AL ++ + A+ F AL VL +A TK PL Sbjct: 60 P--WLTFKVIGVVLYIVFGLFAL--KKAKTALAKWGFFVAALAVLMATAMVAVTKQPLF 114 >UniRef50_C4GIH0 Putative uncharacterized protein n=1 Tax=Kingella oralis ATCC 51147 RepID=C4GIH0_9NEIS Length = 125 Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 1/83 (1%) Query: 11 HLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKAHILPFSG 70 H+ +A+++ L LRFWLR + + R++P + D++LL +G+ +M PF G Sbjct: 12 HMFFVAITIILFNLRFWLRTMQPEKPLPVILRVLPHINDSMLLFTGMLMMQIVPWQPF-G 70 Query: 71 QAQWLTEKLFGVIIYIVLGFIAL 93 ++WL KL V+ YI +G L Sbjct: 71 ASKWLGVKLLLVLTYIFVGAFCL 93 >UniRef50_C1D4W3 Invasion gene expression up-regulator, SirB n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D4W3_LARHH Length = 126 Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 36/88 (40%), Positives = 50/88 (56%), Gaps = 4/88 (4%) Query: 38 ARWTRIVPPVVDTLLLLSGIALMAKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRR 97 AR TRIVP V+DT LL+ GI L A P WL K+ +++Y+ LG +AL R Sbjct: 37 ARLTRIVPHVIDTALLVLGIWLAWSARFNPL--NEPWLMAKIVLLLVYVGLGSVAL--RP 92 Query: 98 MHSQQARIIAFPLALVVLYIIIKLATTK 125 S+ R A+ ++L V+ II +A TK Sbjct: 93 GRSKAVRTAAYVISLAVVVSIIIIAKTK 120 >UniRef50_C0DTE2 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DTE2_EIKCO Length = 123 Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 41/116 (35%), Positives = 62/116 (53%), Gaps = 5/116 (4%) Query: 11 HLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKAHILPFSG 70 HL+ + ++V L LRFW+R + R VP + DTLLL +G+ LM +PF G Sbjct: 9 HLVFVVITVVLFNLRFWMRTILPSSPVPKVLRFVPHINDTLLLFTGMMLMTITRYVPF-G 67 Query: 71 QAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQAR-IIAFPLALVVLYIIIKLATTK 125 A WL KL V++Y+++G L + + A+ I + L++ L I LAT K Sbjct: 68 NADWLGVKLILVVLYVLVGMFCL---KSPPRSAKWWIGYALSIGCLCTIYWLATYK 120 >UniRef50_Q21X92 Invasion gene expression up-regulator, SirB n=2 Tax=Betaproteobacteria RepID=Q21X92_RHOFD Length = 127 Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 40/121 (33%), Positives = 59/121 (48%), Gaps = 4/121 (3%) Query: 10 VHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKAHILPFS 69 +H+ + LSV L LR L P R ++ P V+DT LL + + L + PF Sbjct: 9 LHVTCVVLSVSLFVLRGSLELLAQPWRQWRLLKVAPHVIDTTLLTAALWLAWRIGQYPFV 68 Query: 70 GQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLATTKVPLL 129 WLT K+ ++ YI+LG AL R Q+ R+ F AL+ + I+ +A T P Sbjct: 69 N--GWLTAKVLALLAYILLGMRALGKRT--PQEQRLPFFLGALLSVGYIVGVALTHSPSW 124 Query: 130 G 130 G Sbjct: 125 G 125 >UniRef50_Q1N6F9 Invasion gene expression up-regulator, SirB n=1 Tax=Bermanella marisrubri RepID=Q1N6F9_9GAMM Length = 130 Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 5/118 (4%) Query: 11 HLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKAHILPFSG 70 HL+ +ALS+ +R + +W +I P ++DT LL +GIAL H P S Sbjct: 12 HLLLVALSLSFFVIRGIALLMQAGWLQKKWAKISPHIIDTFLLATGIALTVITHQYPISD 71 Query: 71 QAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLATTKVPL 128 WLT K+ ++ YI+ G + + + R F A++ + +++ +A T PL Sbjct: 72 --HWLTAKMVFLVGYILFG---IKMMKTDNVMLRRSFFAAAIICIIMMVTIARTHHPL 124 >UniRef50_Q21KQ5 Invasion gene expression up-regulator, SirB n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21KQ5_SACD2 Length = 120 Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 40/122 (32%), Positives = 58/122 (47%), Gaps = 5/122 (4%) Query: 4 FSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKA 63 F+ + +H+ + LS+G +RF + R +I P V+DTLLL++G+ L Sbjct: 2 FAVIKHIHVWLVLLSIGGFAVRFLWLMGNSSKLQLRAVKIAPHVIDTLLLVTGVTLAVML 61 Query: 64 HILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLAT 123 PF W + KL VI YI LG A H + I+ AL+ II LAT Sbjct: 62 RYSPF--DYSWFSIKLLLVITYIGLGITAFKIPHKHLRAIFGIS---ALLTACAIIILAT 116 Query: 124 TK 125 +K Sbjct: 117 SK 118 >UniRef50_D0KXB0 Invasion gene expression up-regulator SirB n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KXB0_HALNC Length = 140 Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 39/118 (33%), Positives = 64/118 (54%), Gaps = 7/118 (5%) Query: 10 VHLISIALS-VGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKAHIL-P 67 +H +++ LS +G + W+ + P+ ARW +I P +VDT+LL+S AL+A + Sbjct: 10 IHGLAVVLSLIGFILRGIWM-LKDSPRLKARWVKITPHIVDTVLLVS--ALIASYLMFWR 66 Query: 68 FSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLATTK 125 + ++T + G+I+YIVLG AL R ++ R A+ LA+ V I T K Sbjct: 67 YGVNPDYVTVMIVGLIVYIVLGLFAL--RLGKTKAIRASAWVLAIAVFLYISAAGTLK 122 >UniRef50_C7R602 Invasion gene expression up-regulator SirB n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R602_KANKD Length = 121 Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 9/89 (10%) Query: 42 RIVPPVVDTLLLLSGIALMAKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQ 101 +I+P V+DT LL SGI LM + + P WLT K+ ++ YI+ G + H+ Sbjct: 39 KILPHVIDTFLLASGIVLMVQTKMYP--HHQPWLTVKILLIVTYILFGI-----KMFHAT 91 Query: 102 QA--RIIAFPLALVVLYIIIKLATTKVPL 128 ++ R+ F LAL + ++ LA K PL Sbjct: 92 ESKKRLTFFALALASVLAVLYLARVKPPL 120 >UniRef50_B3PJ86 Putative membrane protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PJ86_CELJU Length = 127 Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 5/90 (5%) Query: 39 RWTRIVPPVVDTLLLLSGIALMAKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRM 98 + +I+P +++T+L+LSGI L ++ P G WL K+ G+++YI LG A ++ Sbjct: 37 KLVKILPHIINTILILSGIVLAVYLNMSP--GSQPWLLAKIIGLVVYITLGVFAF---KV 91 Query: 99 HSQQARIIAFPLALVVLYIIIKLATTKVPL 128 S R+ + ALVV I +A K PL Sbjct: 92 ASPTLRLGLWLAALVVFVQITSMAVHKNPL 121 >UniRef50_A1U5E9 Invasion gene expression up-regulator, SirB n=2 Tax=Marinobacter RepID=A1U5E9_MARAV Length = 123 Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 42/125 (33%), Positives = 61/125 (48%), Gaps = 4/125 (3%) Query: 1 MTSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALM 60 MTS+ L +H+ + L++ L LR L P R +P + DT+LL++ IAL+ Sbjct: 1 MTSYIILKHLHMTTAYLTITLFALRLLLDAVGRPGWRQTPLRFIPHINDTILLVAAIALV 60 Query: 61 AKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIK 120 A S WL K+ + YI+ G AL + + ARI+A LALV + I Sbjct: 61 FVAGYA--SAMPGWLITKIVLLFGYIIAGVFAL--KTTVGKPARIVAAVLALVQVSAIFH 116 Query: 121 LATTK 125 LA K Sbjct: 117 LAMAK 121 >UniRef50_Q0F0D8 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F0D8_9PROT Length = 124 Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust. Identities = 42/123 (34%), Positives = 64/123 (52%), Gaps = 4/123 (3%) Query: 5 STLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKAH 64 + LL +H+ + LS+ L T R +Q P R VP VDT+LL SGI L Sbjct: 3 TWLLPLHISLVGLSLVLFTWRGVRTWQGRPINGRLLHRYVPDTVDTMLLASGIFLAWSLQ 62 Query: 65 ILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLATT 124 ++P+ A WL KL +++YI+LGF+ YR + +F +AL+ + I+ +A T Sbjct: 63 VMPW--HAAWLAAKLIAILLYILLGFVVFRYR--GAIWINRASFVIALIAVVYIVAVAHT 118 Query: 125 KVP 127 P Sbjct: 119 MQP 121 >UniRef50_Q7MFW3 Uncharacterized protein conserved in bacteria n=2 Tax=Vibrio vulnificus RepID=Q7MFW3_VIBVY Length = 127 Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust. Identities = 37/129 (28%), Positives = 60/129 (46%), Gaps = 4/129 (3%) Query: 1 MTSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALM 60 M + LL H+ I LS LR + ++ W V V+ ++L+S IAL Sbjct: 1 MMMYLLLLKAHIGLIVLSFLSFALRAYWGFKASTWLMKEWPLKVHKVITLVMLISAIALC 60 Query: 61 AKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIK 120 PF+ WLTEKL + Y+ GF L ++ ++Q R + + ++ +I Sbjct: 61 LTISQYPFAD--TWLTEKLLLLAAYV--GFAMLAFKPQLNRQLRTVFTSVTCILFVMIFY 116 Query: 121 LATTKVPLL 129 +A T VP+L Sbjct: 117 IAKTHVPIL 125 >UniRef50_B0BP11 Putative uncharacterized protein n=6 Tax=Pasteurellaceae RepID=B0BP11_ACTPJ Length = 123 Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust. Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 11/81 (13%) Query: 42 RIVPPVVDTLLLLSGIALMAKAHILPFSG-----QAQWLTEKLFGVIIYIVLGFIALDYR 96 RI P +VDTLLL+SGIAL+A IL +G + QWL K+ +++YIV A Sbjct: 42 RIAPHIVDTLLLVSGIALLA---ILLSNGIYALNEMQWLIPKIAFLVLYIVFSVKAFKKS 98 Query: 97 RMHSQQARIIA---FPLALVV 114 ++ S + I+A F LA++V Sbjct: 99 QLFSLKNFILAVVSFMLAMLV 119 >UniRef50_A4SK66 Transcriptional regulator n=2 Tax=Aeromonas RepID=A4SK66_AERS4 Length = 147 Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 58/116 (50%), Gaps = 2/116 (1%) Query: 10 VHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKAHILPFS 69 +HL+ IA +V + LRF+ +A++ V ++ L++LSG+ L + P + Sbjct: 28 LHLVLIASAVLMFMLRFYWVQTGSGRAYSDQIMKVSGWLNGLVVLSGVLLCMVLDLNPLN 87 Query: 70 GQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLATTK 125 WL+EKL +++ L +AL R + R AF A+ ++ I KLA K Sbjct: 88 NGTPWLSEKLTAILVVAFLAMMAL--RLACNNGIRWFAFLGAIGWVFFIAKLAVYK 141 >UniRef50_C5BLU0 Protein SirB n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BLU0_TERTT Length = 123 Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust. Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 4/87 (4%) Query: 39 RWTRIVPPVVDTLLLLSGIALMAKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRM 98 RW +I+P + DT LL+SG+ L PF+ W KL + +YIVLG L +R Sbjct: 39 RWVKILPHINDTGLLISGVTLAIFFGYSPFA--VFWFGVKLALIALYIVLG--VLLFRTH 94 Query: 99 HSQQARIIAFPLALVVLYIIIKLATTK 125 ++ +I F ++ + + II + TK Sbjct: 95 QNRLYQITLFSMSFITYFFIIIVVLTK 121 >UniRef50_A2SGG2 Putative uncharacterized protein n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SGG2_METPP Length = 140 Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust. Identities = 41/125 (32%), Positives = 59/125 (47%), Gaps = 6/125 (4%) Query: 1 MTSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALM 60 ++ + L S H+ SVGL T R + R ++D+LLL +G AL Sbjct: 4 LSQYPALKSAHMALAGASVGLFTARGLGVQWRAAWPLRAGVRRASVLIDSLLLAAGGALW 63 Query: 61 AKAHILPFS-GQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIII 119 A +L S A WL KL ++ YIVLG AL +R + + R +AF AL + I+ Sbjct: 64 A---MLGLSLAHAPWLLVKLALIVAYIVLGSFAL--KRARTPRGRGLAFAGALACVLAIV 118 Query: 120 KLATT 124 A T Sbjct: 119 ATALT 123 >UniRef50_Q3IK93 Putative uncharacterized protein n=2 Tax=Alteromonadales RepID=Q3IK93_PSEHT Length = 124 Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust. Identities = 41/119 (34%), Positives = 57/119 (47%), Gaps = 5/119 (4%) Query: 11 HLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKAHILPFSG 70 H+ LSV L +R + R A + I +DTLLL+S + LM A I PF Sbjct: 10 HMAIAMLSVILFYVRSFSRMGSGKLAKNKLVFIGSHGIDTLLLVSALMLMGIAKINPF-- 67 Query: 71 QAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLATTKVPLL 129 + WL EK+ V+IYI +G ++ + + A I L V+ I LAT K LL Sbjct: 68 EQYWLLEKIVLVVIYIAVGIVSSKQTKTAPKVAYTIFNTL---VILAIGYLATAKSALL 123 >UniRef50_B9YZ33 Invasion gene expression up-regulator SirB n=2 Tax=Chromobacterium group RepID=B9YZ33_9NEIS Length = 126 Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust. Identities = 47/126 (37%), Positives = 68/126 (53%), Gaps = 4/126 (3%) Query: 1 MTSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALM 60 M +++ + H+ LS+ L T+R L P A+ RI+P VVDTLLL GI L Sbjct: 1 MPTYTFIKHAHMGCAYLSILLFTVRGGLMLADSPLLRAKPLRILPHVVDTLLLTLGITLA 60 Query: 61 AKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIK 120 AH LP Q WL K+ +++YI LG +AL +R ++ R AF AL + I+ Sbjct: 61 VLAHFLP--TQQDWLMAKIVLLLVYIGLGTVAL--KRGRTKAIRTTAFAAALATVLWIVL 116 Query: 121 LATTKV 126 +A TK+ Sbjct: 117 IAKTKM 122 >UniRef50_A6FEA7 Putative membrane protein n=1 Tax=Moritella sp. PE36 RepID=A6FEA7_9GAMM Length = 129 Score = 39.7 bits (91), Expect = 0.030, Method: Compositional matrix adjust. Identities = 22/52 (42%), Positives = 33/52 (63%), Gaps = 2/52 (3%) Query: 42 RIVPPVVDTLLLLSGIALMAKAHILPFSGQAQWLTEKLFGVIIYIVLGFIAL 93 +I+P ++D+LL+L LM PF+ WLT KL G+I YI++G IA+ Sbjct: 41 KILPHIIDSLLILLAGHLMMTIQQYPFADA--WLTAKLIGLIAYIIVGTIAI 90 >UniRef50_A4BIA2 Putative uncharacterized protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BIA2_9GAMM Length = 124 Score = 39.7 bits (91), Expect = 0.032, Method: Compositional matrix adjust. Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 4/97 (4%) Query: 31 QKHPQAFARWTRIVPPVVDTLLLLSGIALMAKAHILPFSGQAQWLTEKLFGVIIYIVLGF 90 +H +W RI+P ++DT L+++ I L + P + WL K+ +++YIVLG Sbjct: 29 NQHSIMQQKWIRILPHIIDTGLIVAAIYLAWFLRLNPIT--QPWLAVKIVALVVYIVLG- 85 Query: 91 IALDYRRMHSQQARIIAFPLALVVLYIIIKLATTKVP 127 A +R S +A+ + + A+ I +A T+ P Sbjct: 86 -ARVIKRRGSVKAQWVTYAAAIATFAYIGAVAMTRSP 121 >UniRef50_Q65SI4 Putative uncharacterized protein n=1 Tax=Mannheimia succiniciproducens MBEL55E RepID=Q65SI4_MANSM Length = 116 Score = 39.3 bits (90), Expect = 0.039, Method: Compositional matrix adjust. Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 9/109 (8%) Query: 5 STLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKAH 64 +TLL H+ LS+ LL +R +++ Q + +I P + DTLL+LSG+AL Sbjct: 3 TTLLQTHITFAFLSLMLLIVRGYMQLQGKDWRTVKLLKITPHLADTLLVLSGVAL----- 57 Query: 65 ILPFS-GQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLAL 112 + F G WL K+ +++Y F + + + ++ ++ I+ LAL Sbjct: 58 VFVFGYGLQMWLIGKVLLLVLY---AFFSAKFFQKNAVKSNILFLILAL 103 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_C9XTV6 Protein sirB2 n=4 Tax=Enterobacteriaceae RepID=C... 118 4e-26 UniRef50_Q46755 Protein sirB2 n=63 Tax=Enterobacteriaceae RepID=... 113 1e-24 UniRef50_B5FBX2 Transcriptional regulator n=49 Tax=Vibrionales R... 106 2e-22 UniRef50_Q2BLP8 Putative membrane protein n=1 Tax=Neptuniibacter... 105 5e-22 UniRef50_Q2Y7A0 Invasion gene expression up-regulator, SirB n=4 ... 104 1e-21 UniRef50_Q21X92 Invasion gene expression up-regulator, SirB n=2 ... 102 3e-21 UniRef50_P0A238 Protein sirB2 n=80 Tax=Gammaproteobacteria RepID... 102 4e-21 UniRef50_Q2SBR9 Uncharacterized protein conserved in bacteria n=... 101 5e-21 UniRef50_A0KT91 Invasion gene expression up-regulator, SirB n=28... 100 2e-20 UniRef50_B1Y4A7 Invasion gene expression up-regulator SirB n=2 T... 99 4e-20 UniRef50_C7RNU8 Invasion gene expression up-regulator SirB n=1 T... 98 8e-20 UniRef50_Q3J8K9 Invasion gene expression up-regulator, SirB n=2 ... 97 1e-19 UniRef50_Q15SR2 Invasion gene expression up-regulator, SirB n=1 ... 97 2e-19 UniRef50_Q5P0W4 Predicted Invasion gene expression up-regulator,... 93 2e-18 UniRef50_Q47Y96 SirB family protein n=1 Tax=Colwellia psychreryt... 93 3e-18 UniRef50_Q1N6F9 Invasion gene expression up-regulator, SirB n=1 ... 92 5e-18 UniRef50_C6P0M9 Invasion gene expression up-regulator SirB n=1 T... 92 6e-18 UniRef50_UPI0000E0E158 invasion gene expression up-regulator, Si... 90 2e-17 UniRef50_A4SSR6 Membrane protein n=4 Tax=Gammaproteobacteria Rep... 90 3e-17 UniRef50_B4RK15 Regulator n=25 Tax=Neisseria RepID=B4RK15_NEIG2 89 3e-17 UniRef50_B4RSV2 Invasion gene expression up-regulator, SirB n=2 ... 87 2e-16 UniRef50_A1WZQ3 Invasion gene expression up-regulator, SirB n=1 ... 87 2e-16 UniRef50_D0KXB0 Invasion gene expression up-regulator SirB n=1 T... 84 2e-15 UniRef50_B3PJ86 Putative membrane protein n=1 Tax=Cellvibrio jap... 84 2e-15 UniRef50_C1D4W3 Invasion gene expression up-regulator, SirB n=1 ... 83 2e-15 UniRef50_C7R602 Invasion gene expression up-regulator SirB n=1 T... 82 4e-15 UniRef50_Q21KQ5 Invasion gene expression up-regulator, SirB n=1 ... 81 1e-14 UniRef50_Q5QV01 Uncharacterized conserved membrane protein n=2 T... 81 1e-14 UniRef50_C0DTE2 Putative uncharacterized protein n=1 Tax=Eikenel... 79 4e-14 UniRef50_A4BQT9 Putative uncharacterized protein n=1 Tax=Nitroco... 78 6e-14 UniRef50_A1U5E9 Invasion gene expression up-regulator, SirB n=2 ... 78 7e-14 UniRef50_C4GIH0 Putative uncharacterized protein n=1 Tax=Kingell... 77 1e-13 UniRef50_B4S0W7 Invasion gene expression up-regulator, SirB n=1 ... 75 8e-13 UniRef50_Q0F0D8 Putative uncharacterized protein n=1 Tax=Maripro... 72 8e-12 Sequences not found previously or not previously below threshold: UniRef50_A1VLW7 Invasion gene expression up-regulator, SirB n=4 ... 94 1e-18 UniRef50_A4BIA2 Putative uncharacterized protein n=1 Tax=Reineke... 80 2e-14 UniRef50_A6FEA7 Putative membrane protein n=1 Tax=Moritella sp. ... 78 8e-14 UniRef50_B9YZ33 Invasion gene expression up-regulator SirB n=2 T... 77 2e-13 UniRef50_A4SK66 Transcriptional regulator n=2 Tax=Aeromonas RepI... 68 7e-11 UniRef50_C5BLU0 Protein SirB n=1 Tax=Teredinibacter turnerae T79... 68 7e-11 UniRef50_Q0ACI6 Invasion gene expression up-regulator, SirB n=1 ... 67 2e-10 UniRef50_A2SGG2 Putative uncharacterized protein n=1 Tax=Methyli... 65 9e-10 UniRef50_B2JWA9 Putative uncharacterized protein n=1 Tax=Burkhol... 64 1e-09 UniRef50_Q3IK93 Putative uncharacterized protein n=2 Tax=Alterom... 62 4e-09 UniRef50_A7HRU5 Conserved hypothetical membrane protein n=1 Tax=... 60 3e-08 UniRef50_Q7MFW3 Uncharacterized protein conserved in bacteria n=... 58 7e-08 UniRef50_Q9CMI4 Putative uncharacterized protein n=1 Tax=Pasteur... 56 3e-07 UniRef50_A1SV91 Putative uncharacterized protein n=2 Tax=Psychro... 56 4e-07 UniRef50_A6F6L3 Uncharacterized protein conserved in bacteria n=... 51 1e-05 UniRef50_B0BP11 Putative uncharacterized protein n=6 Tax=Pasteur... 51 1e-05 UniRef50_Q65SI4 Putative uncharacterized protein n=1 Tax=Mannhei... 50 3e-05 UniRef50_P44139 Uncharacterized protein HI1253 n=20 Tax=Pasteure... 49 4e-05 UniRef50_A7JTS0 Putative uncharacterized protein n=2 Tax=Mannhei... 47 2e-04 UniRef50_Q2BGW5 Invasion gene expression up-regulator, SirB n=1 ... 47 2e-04 UniRef50_A4C9H2 Tryptophanyl-tRNA synthetase n=1 Tax=Pseudoalter... 44 0.001 UniRef50_C5S2A3 Putative uncharacterized protein n=2 Tax=Actinob... 44 0.001 UniRef50_A6V035 Invasion gene expression up-regulator, SirB n=3 ... 44 0.002 UniRef50_Q12MT8 Putative uncharacterized protein n=1 Tax=Shewane... 41 0.014 UniRef50_Q1Q912 Putative uncharacterized protein n=3 Tax=Psychro... 41 0.015 UniRef50_UPI0001699E53 hypothetical protein Epers_14047 n=1 Tax=... 41 0.016 >UniRef50_C9XTV6 Protein sirB2 n=4 Tax=Enterobacteriaceae RepID=C9XTV6_CROTZ Length = 131 Score = 118 bits (297), Expect = 4e-26, Method: Composition-based stats. Identities = 75/130 (57%), Positives = 95/130 (73%), Gaps = 1/130 (0%) Query: 1 MTSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALM 60 M ++ + +H++++ +S+ L LR+W +Y+ P + RW RIVP V DT+LL SG+AL+ Sbjct: 1 MAAYFAVKHLHILTVVISISLFILRYWWQYRSSPMSSKRWVRIVPHVNDTVLLGSGVALV 60 Query: 61 AKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIK 120 H PF+ Q WLTEKLFGVIIYIVLGFIAL RR SQQ R IAF L LVVLYII+K Sbjct: 61 LITHFYPFTPQGAWLTEKLFGVIIYIVLGFIALG-RRPRSQQVRWIAFLLGLVVLYIIVK 119 Query: 121 LATTKVPLLG 130 LATTK+PLLG Sbjct: 120 LATTKIPLLG 129 >UniRef50_Q46755 Protein sirB2 n=63 Tax=Enterobacteriaceae RepID=SIRB2_ECOLI Length = 130 Score = 113 bits (284), Expect = 1e-24, Method: Composition-based stats. Identities = 130/130 (100%), Positives = 130/130 (100%) Query: 1 MTSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALM 60 MTSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALM Sbjct: 1 MTSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALM 60 Query: 61 AKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIK 120 AKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIK Sbjct: 61 AKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIK 120 Query: 121 LATTKVPLLG 130 LATTKVPLLG Sbjct: 121 LATTKVPLLG 130 >UniRef50_B5FBX2 Transcriptional regulator n=49 Tax=Vibrionales RepID=B5FBX2_VIBFM Length = 127 Score = 106 bits (265), Expect = 2e-22, Method: Composition-based stats. Identities = 40/126 (31%), Positives = 68/126 (53%), Gaps = 2/126 (1%) Query: 4 FSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKA 63 ++ + +HL+ +A SV +R+ L + + VP VVD+ +LLSGI L+ Sbjct: 2 YTAVKHIHLLLVACSVLFFVVRYCLMMANSDIRNNGFFKRVPHVVDSAMLLSGIWLIFIT 61 Query: 64 HILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLAT 123 +PF+ A WLTEK+ +++Y+ LG + L+ ++ + AF A+ L + K+A Sbjct: 62 GFIPFTSSAPWLTEKITCIMVYLALGVVTLNN--GKNKVFKTFAFLGAMGWLMVAAKIAV 119 Query: 124 TKVPLL 129 TKVP Sbjct: 120 TKVPTF 125 >UniRef50_Q2BLP8 Putative membrane protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BLP8_9GAMM Length = 125 Score = 105 bits (262), Expect = 5e-22, Method: Composition-based stats. Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 4/125 (3%) Query: 4 FSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKA 63 + + +HL I LS+ L LR + +W ++VP +DTLLL+S I L A Sbjct: 2 YLAIKHIHLTCIVLSLSLFLLRGYWALFSPSHLQRKWVKVVPHCIDTLLLISAITLAALL 61 Query: 64 HILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLAT 123 PF WLT K+ ++ YI G A+ R ++ ++ + LAL+ I+ +A Sbjct: 62 QQYPFIDH--WLTAKVVALLAYIGFGTFAIK--RGKTRSSKALFLVLALLCFGYIVVVAI 117 Query: 124 TKVPL 128 PL Sbjct: 118 NHNPL 122 >UniRef50_Q2Y7A0 Invasion gene expression up-regulator, SirB n=4 Tax=Nitrosomonadaceae RepID=Q2Y7A0_NITMU Length = 129 Score = 104 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 43/125 (34%), Positives = 67/125 (53%), Gaps = 4/125 (3%) Query: 3 SFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAK 62 S++ + +H+ S+ +S L +LR Q RW +I P VVDT+LL S +AL + Sbjct: 2 SYAVIKMIHVGSVIISYLLFSLRSIWMIQGSADLKRRWVKITPHVVDTVLLASAVALAVR 61 Query: 63 AHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLA 122 H P WL+ K+ G+++YI LG AL + +++A+I A A V I+ +A Sbjct: 62 IHQDPV--HDSWLSAKVVGLLLYIGLGMTALRF--GKTRKAKISACVAAQFVFIYIVLVA 117 Query: 123 TTKVP 127 TK P Sbjct: 118 LTKNP 122 >UniRef50_Q21X92 Invasion gene expression up-regulator, SirB n=2 Tax=Betaproteobacteria RepID=Q21X92_RHOFD Length = 127 Score = 102 bits (255), Expect = 3e-21, Method: Composition-based stats. Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 4/128 (3%) Query: 3 SFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAK 62 + + +H+ + LSV L LR L P R ++ P V+DT LL + + L + Sbjct: 2 DYLFVKYLHVTCVVLSVSLFVLRGSLELLAQPWRQWRLLKVAPHVIDTTLLTAALWLAWR 61 Query: 63 AHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLA 122 PF WLT K+ ++ YI+LG AL R Q+ R+ F AL+ + I+ +A Sbjct: 62 IGQYPFVN--GWLTAKVLALLAYILLGMRALGKRT--PQEQRLPFFLGALLSVGYIVGVA 117 Query: 123 TTKVPLLG 130 T P G Sbjct: 118 LTHSPSWG 125 >UniRef50_P0A238 Protein sirB2 n=80 Tax=Gammaproteobacteria RepID=SIRB2_SALTI Length = 129 Score = 102 bits (254), Expect = 4e-21, Method: Composition-based stats. Identities = 94/128 (73%), Positives = 105/128 (82%) Query: 3 SFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAK 62 + + LL++HLI +ALSV L R+W RY H A ARWTRIVPPV+DTLLLLSGI L+ K Sbjct: 2 TIAMLLTLHLICVALSVSLFVARYWWRYCGHALAAARWTRIVPPVIDTLLLLSGIGLIVK 61 Query: 63 AHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLA 122 HILPF+ WLTEKLFGVIIYIVLGFIALDYR+ SQQAR IAFPLALVVLYIIIKLA Sbjct: 62 THILPFTESGSWLTEKLFGVIIYIVLGFIALDYRQARSQQARFIAFPLALVVLYIIIKLA 121 Query: 123 TTKVPLLG 130 TTK+PLLG Sbjct: 122 TTKIPLLG 129 >UniRef50_Q2SBR9 Uncharacterized protein conserved in bacteria n=3 Tax=Proteobacteria RepID=Q2SBR9_HAHCH Length = 127 Score = 101 bits (253), Expect = 5e-21, Method: Composition-based stats. Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 4/123 (3%) Query: 3 SFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAK 62 S+ L +H+ +AL+ TLRF P + ++++P ++DTLLLLS I L K Sbjct: 2 SYMLLKHIHMTCVALTFASFTLRFIWMILGSPLLQHKLSKVLPHIIDTLLLLSAIGLALK 61 Query: 63 AHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLA 122 PF WLT K+ G+IIYI LG AL R +++ R++ A I+ +A Sbjct: 62 LQQYPF--HNGWLTAKVVGLIIYIALGVFALK--RGKTKRTRVLFGLGAYTAFAYIVMVA 117 Query: 123 TTK 125 TK Sbjct: 118 LTK 120 >UniRef50_A0KT91 Invasion gene expression up-regulator, SirB n=28 Tax=Gammaproteobacteria RepID=A0KT91_SHESA Length = 131 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 45/126 (35%), Positives = 64/126 (50%), Gaps = 4/126 (3%) Query: 4 FSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKA 63 + + +HL IA+SV +RF L ++ + +I P V+DT LLLSG+ L Sbjct: 8 YPAVKHLHLTLIAVSVLFFVVRFVLHLRQSALMGKKVFKIAPHVIDTFLLLSGLTLCFMI 67 Query: 64 HILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLAT 123 PF WLTEK+ V+ YI LG IA+ R ++ ++ AF AL L KLA Sbjct: 68 KQYPFVD--PWLTEKIGAVLAYIALGVIAIKANR--NKLFKVFAFLGALGWLVYAAKLAH 123 Query: 124 TKVPLL 129 K +L Sbjct: 124 FKQAVL 129 >UniRef50_B1Y4A7 Invasion gene expression up-regulator SirB n=2 Tax=Burkholderiales RepID=B1Y4A7_LEPCP Length = 133 Score = 99.3 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 40/125 (32%), Positives = 62/125 (49%), Gaps = 4/125 (3%) Query: 3 SFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAK 62 + TL +H ++ LS+G LR W R + +P ++D++LL S I L Sbjct: 5 DYLTLKLIHQSAVVLSIGGFVLRGWASLNGQAWVRGRAAKTLPHLIDSVLLASAITLAWL 64 Query: 63 AHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLA 122 A ++P+ WL K+ G+++YI LG IAL + R A+ ALV I+ +A Sbjct: 65 AGLVPW--HTPWLMSKIVGLLVYIGLGMIALK--PGRDLRLRWAAWLGALVTFGFIVSVA 120 Query: 123 TTKVP 127 TK P Sbjct: 121 ITKQP 125 >UniRef50_C7RNU8 Invasion gene expression up-regulator SirB n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNU8_9PROT Length = 130 Score = 98.1 bits (243), Expect = 8e-20, Method: Composition-based stats. Identities = 41/126 (32%), Positives = 63/126 (50%), Gaps = 4/126 (3%) Query: 3 SFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAK 62 ++ L +H+ + LS LR ++ R+ P V+DT+LL S +A+ Sbjct: 2 TYLILKQIHISCVVLSGSGFVLRGVWTLRQSSWLRRPAVRVWPHVIDTVLLASAVAMAVM 61 Query: 63 AHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLA 122 + PFS WLT KL G++IYI G +AL R ++Q R F AL+ I+ +A Sbjct: 62 STQYPFSAN--WLTAKLIGLLIYIGCGTMALKRARHNAQ--RAAFFAAALLAFAYIVSVA 117 Query: 123 TTKVPL 128 T+ PL Sbjct: 118 LTRNPL 123 >UniRef50_Q3J8K9 Invasion gene expression up-regulator, SirB n=2 Tax=Nitrosococcus oceani RepID=Q3J8K9_NITOC Length = 129 Score = 97.3 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 47/127 (37%), Positives = 67/127 (52%), Gaps = 4/127 (3%) Query: 1 MTSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALM 60 MT + TL +HL S+ ++ L R RW R+VPP+VDT+LL S I L Sbjct: 2 MTVYLTLKYIHLTSVVTTLVLFVGRGLWMLSSSHYLQRRWVRLVPPIVDTVLLASAIGLT 61 Query: 61 AKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIK 120 H PF WLT K+ +I YIV G IAL Y R ++ RI A +A+++ ++ Sbjct: 62 LVLHQYPFVN--DWLTAKILALIGYIVFGSIALKYGR--TRSVRIGAGCIAMILFTYMVW 117 Query: 121 LATTKVP 127 +A +K P Sbjct: 118 VARSKTP 124 >UniRef50_Q15SR2 Invasion gene expression up-regulator, SirB n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15SR2_PSEA6 Length = 125 Score = 96.6 bits (239), Expect = 2e-19, Method: Composition-based stats. Identities = 38/126 (30%), Positives = 62/126 (49%), Gaps = 4/126 (3%) Query: 4 FSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKA 63 ++ + +HL IALSV L +RF+ +W +I P +VDTLL+LS L Sbjct: 2 YTAVKHIHLTCIALSVLLFVIRFFWTMTSSSMLQKKWVKITPHIVDTLLILSAATLCVMI 61 Query: 64 HILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLAT 123 PF W+TEK G+++Y+ +AL + + R++ AL + +A Sbjct: 62 SQYPFV--TPWVTEKFVGLLMYVF--MVALALKMARTNFMRVVGLVGALSWIAFTALVAI 117 Query: 124 TKVPLL 129 +K P+L Sbjct: 118 SKQPIL 123 >UniRef50_A1VLW7 Invasion gene expression up-regulator, SirB n=4 Tax=Betaproteobacteria RepID=A1VLW7_POLNA Length = 155 Score = 93.9 bits (232), Expect = 1e-18, Method: Composition-based stats. Identities = 39/127 (30%), Positives = 58/127 (45%), Gaps = 4/127 (3%) Query: 4 FSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKA 63 + + +H+ LS LR P RW ++VP VDTLLL S + L+ + Sbjct: 25 YLAIKHLHITFAVLSGSFFLLRGLWMLADSPMLQRRWVKVVPHAVDTLLLASALVLVFWS 84 Query: 64 HILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLAT 123 PF WLT K+ ++ YIVLG +AL R ++ R A AL I+ +A Sbjct: 85 GQYPFV--QPWLTAKVLALVAYIVLGTVALK--RGKTKGVRAFALLAALATFAYIVAVAL 140 Query: 124 TKVPLLG 130 T+ + Sbjct: 141 TRQAAIA 147 >UniRef50_Q5P0W4 Predicted Invasion gene expression up-regulator, SirB n=2 Tax=Rhodocyclaceae RepID=Q5P0W4_AZOSE Length = 131 Score = 93.5 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 43/124 (34%), Positives = 66/124 (53%), Gaps = 4/124 (3%) Query: 4 FSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKA 63 ++ + +H++ LS L+ ++ P R TR+VP VVDT+ L S I L + Sbjct: 2 YAAIKHLHILCAMLSGSGFLLQGIWMMRRSPLLDHRATRVVPHVVDTVFLASAITLAVLS 61 Query: 64 HILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLAT 123 PF A W+T K+ G+++Y+VLG+IAL R + RI A AL+V I+ +A Sbjct: 62 AQYPFV--APWVTAKVIGLVVYVVLGYIAL--RGGATMGIRIFALICALLVFSWIVSVAL 117 Query: 124 TKVP 127 TK Sbjct: 118 TKNA 121 >UniRef50_Q47Y96 SirB family protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47Y96_COLP3 Length = 121 Score = 92.7 bits (229), Expect = 3e-18, Method: Composition-based stats. Identities = 39/123 (31%), Positives = 62/123 (50%), Gaps = 4/123 (3%) Query: 7 LLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKAHIL 66 + +H+ LS+ L T RF L +W +I P V+DT LL++GI+L K H+ Sbjct: 1 MKHLHITLAVLSISLFTYRFILTLMASKNLDRKWLKISPHVIDTFLLIAGISLAVKLHLN 60 Query: 67 PFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLATTKV 126 P + WL EK+ + YI G+ L R Q I+ F A+ + +I++LA T+ Sbjct: 61 PM--EQMWLAEKILALFAYIFTGYYTLKLARNRPMQ--ILGFLGAMGWVMLIVRLAITRE 116 Query: 127 PLL 129 + Sbjct: 117 AMF 119 >UniRef50_Q1N6F9 Invasion gene expression up-regulator, SirB n=1 Tax=Bermanella marisrubri RepID=Q1N6F9_9GAMM Length = 130 Score = 92.3 bits (228), Expect = 5e-18, Method: Composition-based stats. Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 5/127 (3%) Query: 2 TSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMA 61 T + + HL+ +ALS+ +R + +W +I P ++DT LL +GIAL Sbjct: 3 TLYIAMKHSHLLLVALSLSFFVIRGIALLMQAGWLQKKWAKISPHIIDTFLLATGIALTV 62 Query: 62 KAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKL 121 H P S WLT K+ ++ YI+ G + + + R F A++ + +++ + Sbjct: 63 ITHQYPISDH--WLTAKMVFLVGYILFG---IKMMKTDNVMLRRSFFAAAIICIIMMVTI 117 Query: 122 ATTKVPL 128 A T PL Sbjct: 118 ARTHHPL 124 >UniRef50_C6P0M9 Invasion gene expression up-regulator SirB n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P0M9_9PROT Length = 139 Score = 91.9 bits (227), Expect = 6e-18, Method: Composition-based stats. Identities = 36/123 (29%), Positives = 64/123 (52%), Gaps = 4/123 (3%) Query: 6 TLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKAHI 65 L VH+ + LS L LR + W ++ P +VDT L+LS I L + I Sbjct: 16 LLKLVHIGCVILSYSLFFLRGVWMLRDSSSLQQHWVKVAPHIVDTALILSAITLAWQLGI 75 Query: 66 LPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLATTK 125 P + A WL K+ +++YI +G +AL +++ R+I++ +A ++ + ++ +A T Sbjct: 76 SPLA--APWLAAKIVALLLYIAVGMMALKL--GKTKRVRLISWLMAQLLFFYMVSVAVTH 131 Query: 126 VPL 128 PL Sbjct: 132 DPL 134 >UniRef50_UPI0000E0E158 invasion gene expression up-regulator, SirB n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E0E158 Length = 123 Score = 90.0 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 38/126 (30%), Positives = 69/126 (54%), Gaps = 4/126 (3%) Query: 4 FSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKA 63 + L +HL ++ALS+ LTL+ A+W +++P ++ T+L+++ I+L Sbjct: 2 YEGLKHLHLTAVALSLLFLTLQVIAHIFDTKMKDAKWLKVLPHIIHTVLIVTAISLCVIL 61 Query: 64 HILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLAT 123 PF W+T KL G++ YI+L +A+ + R + R+ AF A+ L + K+A Sbjct: 62 AQYPFVH--DWVTSKLIGLVAYILLAVLAVKWAR--TNAMRVFAFLGAVAWLGLTAKVAF 117 Query: 124 TKVPLL 129 +K+PL Sbjct: 118 SKMPLF 123 >UniRef50_A4SSR6 Membrane protein n=4 Tax=Gammaproteobacteria RepID=A4SSR6_AERS4 Length = 128 Score = 89.6 bits (221), Expect = 3e-17, Method: Composition-based stats. Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 5/125 (4%) Query: 1 MTSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALM 60 + + L +H+ +S+ L R+ L P+ RW +I P V DT LLL G+ L Sbjct: 2 IAYYPLLKHLHMTLAIVSLLLFVYRWMLSLNASPRLQQRWLKIAPHVNDTFLLLFGVLLA 61 Query: 61 AKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIK 120 + P Q WL KL +++YI LG +AL ++ +++A AL V ++ Sbjct: 62 VTLQMSP--SQQPWLMAKLIALVVYIGLGVMALK---RPARSQKLMAGVAALAVFGYMVG 116 Query: 121 LATTK 125 A TK Sbjct: 117 AAMTK 121 >UniRef50_B4RK15 Regulator n=25 Tax=Neisseria RepID=B4RK15_NEIG2 Length = 124 Score = 89.2 bits (220), Expect = 3e-17, Method: Composition-based stats. Identities = 33/123 (26%), Positives = 63/123 (51%), Gaps = 4/123 (3%) Query: 4 FSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKA 63 + + H I + +++ + +RF+L ++ + + + +P + DT+LL +G+ LM Sbjct: 3 YLIVKYSHQIFVTITILVFNIRFFLLWKNPEKPLVGFWKALPHLNDTMLLFTGLWLMKIT 62 Query: 64 HILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLAT 123 H PF A WL K+ + YI LG + + R ++ + + LA+ + I+ LA Sbjct: 63 HFSPF--NAPWLGTKILLLFAYIALGMVMMRARPRSTKFYTV--YLLAMCCIACIVYLAK 118 Query: 124 TKV 126 TKV Sbjct: 119 TKV 121 >UniRef50_B4RSV2 Invasion gene expression up-regulator, SirB n=2 Tax=Alteromonas macleodii RepID=B4RSV2_ALTMD Length = 114 Score = 86.9 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 38/118 (32%), Positives = 55/118 (46%), Gaps = 4/118 (3%) Query: 12 LISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKAHILPFSGQ 71 + ++ LS+ RF +W +I+P ++DT+LL S I L P Sbjct: 1 MTAVGLSILFFIFRFIWSQFDATALSKKWVKILPHIIDTVLLASAIWLCFILSQYPIVN- 59 Query: 72 AQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLATTKVPLL 129 WLT K+ GV++YIV G AL + + A+ F AL VL +A TK PL Sbjct: 60 -PWLTFKVIGVVLYIVFGLFALK--KAKTALAKWGFFVAALAVLMATAMVAVTKQPLF 114 >UniRef50_A1WZQ3 Invasion gene expression up-regulator, SirB n=1 Tax=Halorhodospira halophila SL1 RepID=A1WZQ3_HALHL Length = 128 Score = 86.9 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 4/124 (3%) Query: 6 TLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKAHI 65 LLS H+++ S+GL R L ++ + R+ P V DT+LLL+ + LM Sbjct: 4 VLLSTHVLAAVASLGLFIARGILMFRGSAALDHKVLRVAPRVADTVLLLTAVVLMVMIAQ 63 Query: 66 LPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLATTK 125 PF WLT KL G+I YI LG +AL R + R+ AF +VV+ + + T+ Sbjct: 64 YPFVD--GWLTVKLLGLIAYIALGVVAL--GRSRPRPIRMAAFVGGIVVIGYLYLYSVTR 119 Query: 126 VPLL 129 PLL Sbjct: 120 EPLL 123 >UniRef50_D0KXB0 Invasion gene expression up-regulator SirB n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KXB0_HALNC Length = 140 Score = 83.8 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 38/127 (29%), Positives = 63/127 (49%), Gaps = 3/127 (2%) Query: 1 MTSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALM 60 MT + +H +++ LS+ LR + P+ ARW +I P +VDT+LL+S + + Sbjct: 1 MTIAQISVHIHGLAVVLSLIGFILRGIWMLKDSPRLKARWVKITPHIVDTVLLVSAL-IA 59 Query: 61 AKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIK 120 + + ++T + G+I+YIVLG AL R ++ R A+ LA+ V I Sbjct: 60 SYLMFWRYGVNPDYVTVMIVGLIVYIVLGLFAL--RLGKTKAIRASAWVLAIAVFLYISA 117 Query: 121 LATTKVP 127 T K Sbjct: 118 AGTLKTA 124 >UniRef50_B3PJ86 Putative membrane protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PJ86_CELJU Length = 127 Score = 83.8 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 5/125 (4%) Query: 4 FSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKA 63 + L +H+ + LS LR + + +I+P +++T+L+LSGI L Sbjct: 2 YLLLKHLHMTFVVLSFITFLLRGIWMLRGSRLLERKLVKILPHIINTILILSGIVLAVYL 61 Query: 64 HILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLAT 123 ++ P G WL K+ G+++YI LG A S R+ + ALVV I +A Sbjct: 62 NMSP--GSQPWLLAKIIGLVVYITLGVFAFKVA---SPTLRLGLWLAALVVFVQITSMAV 116 Query: 124 TKVPL 128 K PL Sbjct: 117 HKNPL 121 >UniRef50_C1D4W3 Invasion gene expression up-regulator, SirB n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D4W3_LARHH Length = 126 Score = 83.5 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 42/125 (33%), Positives = 60/125 (48%), Gaps = 4/125 (3%) Query: 3 SFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAK 62 S+ L H L++ T+R AR TRIVP V+DT LL+ GI L Sbjct: 2 SYLALKGAHAGFAYLTLLSFTIRGIWMLTDSRLLTARLTRIVPHVIDTALLVLGIWLAWS 61 Query: 63 AHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLA 122 A P WL K+ +++Y+ LG +AL R S+ R A+ ++L V+ II +A Sbjct: 62 ARFNPL--NEPWLMAKIVLLLVYVGLGSVAL--RPGRSKAVRTAAYVISLAVVVSIIIIA 117 Query: 123 TTKVP 127 TK Sbjct: 118 KTKPA 122 >UniRef50_C7R602 Invasion gene expression up-regulator SirB n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R602_KANKD Length = 121 Score = 82.3 bits (202), Expect = 4e-15, Method: Composition-based stats. Identities = 36/125 (28%), Positives = 55/125 (44%), Gaps = 5/125 (4%) Query: 5 STLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKAH 64 L H+ AL+V +R ++ + +I+P V+DT LL SGI LM + Sbjct: 2 LALKHFHMSLAALTVLGFLIRSVWLFRGSQLLQKKVVKILPHVIDTFLLASGIVLMVQTK 61 Query: 65 ILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLATT 124 + P WLT K+ ++ YI+ G R+ F LAL + ++ LA Sbjct: 62 MYP--HHQPWLTVKILLIVTYILFGIKMFHATESKK---RLTFFALALASVLAVLYLARV 116 Query: 125 KVPLL 129 K PL Sbjct: 117 KPPLW 121 >UniRef50_Q21KQ5 Invasion gene expression up-regulator, SirB n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21KQ5_SACD2 Length = 120 Score = 80.8 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 41/123 (33%), Positives = 57/123 (46%), Gaps = 5/123 (4%) Query: 4 FSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKA 63 F+ + +H+ + LS+G +RF + R +I P V+DTLLL++G+ L Sbjct: 2 FAVIKHIHVWLVLLSIGGFAVRFLWLMGNSSKLQLRAVKIAPHVIDTLLLVTGVTLAVML 61 Query: 64 HILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLAT 123 PF W + KL VI YI LG A H R I AL+ II LAT Sbjct: 62 RYSPF--DYSWFSIKLLLVITYIGLGITAFKIPHKH---LRAIFGISALLTACAIIILAT 116 Query: 124 TKV 126 +K Sbjct: 117 SKP 119 >UniRef50_Q5QV01 Uncharacterized conserved membrane protein n=2 Tax=Idiomarina RepID=Q5QV01_IDILO Length = 124 Score = 80.8 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 40/127 (31%), Positives = 65/127 (51%), Gaps = 5/127 (3%) Query: 4 FSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKA 63 ++ +H++ + +S+ L RF L P +W +IVP V DTLLLLS + +M Sbjct: 2 YAAFKHLHVLFVLISISLFLFRFVLLLLDSPLLKKKWLKIVPHVNDTLLLLSAVGIMVTL 61 Query: 64 HILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLAT 123 + P Q WLT+K+ GVI YI G +A+ + AR + F A + ++ +A Sbjct: 62 SMYPI--QVPWLTDKVIGVIAYIGFGVLAMK---GKTAGARWLGFIGACGWIAFLLHVAV 116 Query: 124 TKVPLLG 130 +K L+ Sbjct: 117 SKQALIA 123 >UniRef50_A4BIA2 Putative uncharacterized protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BIA2_9GAMM Length = 124 Score = 80.0 bits (196), Expect = 2e-14, Method: Composition-based stats. Identities = 32/124 (25%), Positives = 61/124 (49%), Gaps = 4/124 (3%) Query: 4 FSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKA 63 + + +H+ +S+ +R L +H +W RI+P ++DT L+++ I L Sbjct: 2 YLMIKHLHMTLALISILGFIVRGALAINQHSIMQQKWIRILPHIIDTGLIVAAIYLAWFL 61 Query: 64 HILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLAT 123 + P + WL K+ +++YIVLG A +R S +A+ + + A+ I +A Sbjct: 62 RLNPIT--QPWLAVKIVALVVYIVLG--ARVIKRRGSVKAQWVTYAAAIATFAYIGAVAM 117 Query: 124 TKVP 127 T+ P Sbjct: 118 TRSP 121 >UniRef50_C0DTE2 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DTE2_EIKCO Length = 123 Score = 79.2 bits (194), Expect = 4e-14, Method: Composition-based stats. Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 3/123 (2%) Query: 4 FSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKA 63 + + HL+ + ++V L LRFW+R + R VP + DTLLL +G+ LM Sbjct: 2 YLIVKHSHLVFVVITVVLFNLRFWMRTILPSSPVPKVLRFVPHINDTLLLFTGMMLMTIT 61 Query: 64 HILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLAT 123 +PF G A WL KL V++Y+++G L ++ I + L++ L I LAT Sbjct: 62 RYVPF-GNADWLGVKLILVVLYVLVGMFCLKSPPRSAKW--WIGYALSIGCLCTIYWLAT 118 Query: 124 TKV 126 K Sbjct: 119 YKP 121 >UniRef50_A4BQT9 Putative uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BQT9_9GAMM Length = 96 Score = 78.5 bits (192), Expect = 6e-14, Method: Composition-based stats. Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 3/99 (3%) Query: 29 RYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKAHILPFSGQAQWLTEKLFGVIIYIVL 88 P RW R++P +D ++L SG+ L + P + W+ KL G++ Y+VL Sbjct: 1 MLYDSPLLSRRWVRVLPHAIDAVVLASGLYLAVAFYEFPLTYH-PWIIAKLTGLLAYVVL 59 Query: 89 GFIALDYRRMHSQQARIIAFPLALVVLYIIIKLATTKVP 127 G IAL RR +++ R+ AF +L++ I+ +A TK+P Sbjct: 60 GAIAL--RRGRTKRVRVAAFVGSLLLFGYIVFVAVTKMP 96 >UniRef50_A1U5E9 Invasion gene expression up-regulator, SirB n=2 Tax=Marinobacter RepID=A1U5E9_MARAV Length = 123 Score = 78.5 bits (192), Expect = 7e-14, Method: Composition-based stats. Identities = 42/126 (33%), Positives = 60/126 (47%), Gaps = 4/126 (3%) Query: 1 MTSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALM 60 MTS+ L +H+ + L++ L LR L P R +P + DT+LL++ IAL+ Sbjct: 1 MTSYIILKHLHMTTAYLTITLFALRLLLDAVGRPGWRQTPLRFIPHINDTILLVAAIALV 60 Query: 61 AKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIK 120 A S WL K+ + YI+ G AL + ARI+A LALV + I Sbjct: 61 FVAGYA--SAMPGWLITKIVLLFGYIIAGVFALK--TTVGKPARIVAAVLALVQVSAIFH 116 Query: 121 LATTKV 126 LA K Sbjct: 117 LAMAKP 122 >UniRef50_A6FEA7 Putative membrane protein n=1 Tax=Moritella sp. PE36 RepID=A6FEA7_9GAMM Length = 129 Score = 78.1 bits (191), Expect = 8e-14, Method: Composition-based stats. Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 4/124 (3%) Query: 3 SFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAK 62 ++ + +H+ LS+ R L + + +I+P ++D+LL+L LM Sbjct: 2 DYAFVKHMHMGMAYLSITFFIFRSVLSVTESALLQNKVIKILPHIIDSLLILLAGHLMMT 61 Query: 63 AHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLA 122 PF+ WLT KL G+I YI++G IA+ R + R+ + A+ + I+ +A Sbjct: 62 IQQYPFAD--AWLTAKLIGLIAYIIVGTIAIK--RGKTAIIRLWSSVAAVAIFAYILGVA 117 Query: 123 TTKV 126 Sbjct: 118 KNHD 121 >UniRef50_C4GIH0 Putative uncharacterized protein n=1 Tax=Kingella oralis ATCC 51147 RepID=C4GIH0_9NEIS Length = 125 Score = 77.3 bits (189), Expect = 1e-13, Method: Composition-based stats. Identities = 33/123 (26%), Positives = 60/123 (48%), Gaps = 3/123 (2%) Query: 4 FSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKA 63 + + H+ +A+++ L LRFWLR + + R++P + D++LL +G+ +M Sbjct: 5 YLPIKHTHMFFVAITIILFNLRFWLRTMQPEKPLPVILRVLPHINDSMLLFTGMLMMQIV 64 Query: 64 HILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLAT 123 PF G ++WL KL V+ YI +G L + + ++++ II LA Sbjct: 65 PWQPF-GASKWLGVKLLLVLTYIFVGAFCLRATPRSGKWF--GLYGAGMLIVLTIIYLAH 121 Query: 124 TKV 126 K Sbjct: 122 WKP 124 >UniRef50_B9YZ33 Invasion gene expression up-regulator SirB n=2 Tax=Chromobacterium group RepID=B9YZ33_9NEIS Length = 126 Score = 76.9 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 47/126 (37%), Positives = 67/126 (53%), Gaps = 4/126 (3%) Query: 1 MTSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALM 60 M +++ + H+ LS+ L T+R L P A+ RI+P VVDTLLL GI L Sbjct: 1 MPTYTFIKHAHMGCAYLSILLFTVRGGLMLADSPLLRAKPLRILPHVVDTLLLTLGITLA 60 Query: 61 AKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIK 120 AH LP Q WL K+ +++YI LG +AL R ++ R AF AL + I+ Sbjct: 61 VLAHFLP--TQQDWLMAKIVLLLVYIGLGTVALK--RGRTKAIRTTAFAAALATVLWIVL 116 Query: 121 LATTKV 126 +A TK+ Sbjct: 117 IAKTKM 122 >UniRef50_B4S0W7 Invasion gene expression up-regulator, SirB n=1 Tax=Alteromonas macleodii 'Deep ecotype' RepID=B4S0W7_ALTMD Length = 112 Score = 74.6 bits (182), Expect = 8e-13, Method: Composition-based stats. Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 4/112 (3%) Query: 14 SIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKAHILPFSGQAQ 73 ++ +R + ++W + +P V+DTLLL S +ALM P+ Sbjct: 2 LAVTTLINFVIRGYWMIIDSSLLHSKWVKTIPHVIDTLLLSSAVALMIMTGFYPWI--LD 59 Query: 74 WLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLATTK 125 W+ K+ +++YIVLG IAL R ++ RI AF AL+ + +I K A +K Sbjct: 60 WVAAKILLLLLYIVLGTIALK--RGKTKAQRIAAFIAALICIGLIFKSALSK 109 >UniRef50_Q0F0D8 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F0D8_9PROT Length = 124 Score = 71.5 bits (174), Expect = 8e-12, Method: Composition-based stats. Identities = 42/123 (34%), Positives = 64/123 (52%), Gaps = 4/123 (3%) Query: 5 STLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKAH 64 + LL +H+ + LS+ L T R +Q P R VP VDT+LL SGI L Sbjct: 3 TWLLPLHISLVGLSLVLFTWRGVRTWQGRPINGRLLHRYVPDTVDTMLLASGIFLAWSLQ 62 Query: 65 ILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLATT 124 ++P+ A WL KL +++YI+LGF+ YR + +F +AL+ + I+ +A T Sbjct: 63 VMPW--HAAWLAAKLIAILLYILLGFVVFRYR--GAIWINRASFVIALIAVVYIVAVAHT 118 Query: 125 KVP 127 P Sbjct: 119 MQP 121 >UniRef50_A4SK66 Transcriptional regulator n=2 Tax=Aeromonas RepID=A4SK66_AERS4 Length = 147 Score = 68.4 bits (166), Expect = 7e-11, Method: Composition-based stats. Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 2/126 (1%) Query: 4 FSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKA 63 + L +HL+ IA +V + LRF+ +A++ V ++ L++LSG+ L Sbjct: 22 YFALKHLHLVLIASAVLMFMLRFYWVQTGSGRAYSDQIMKVSGWLNGLVVLSGVLLCMVL 81 Query: 64 HILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLAT 123 + P + WL+EKL +++ L +AL R + R AF A+ ++ I KLA Sbjct: 82 DLNPLNNGTPWLSEKLTAILVVAFLAMMAL--RLACNNGIRWFAFLGAIGWVFFIAKLAV 139 Query: 124 TKVPLL 129 K L Sbjct: 140 YKQASL 145 >UniRef50_C5BLU0 Protein SirB n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BLU0_TERTT Length = 123 Score = 68.4 bits (166), Expect = 7e-11, Method: Composition-based stats. Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 4/126 (3%) Query: 1 MTSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALM 60 M +H+ L+ +LRF + RW +I+P + DT LL+SG+ L Sbjct: 1 MPYILVAKHLHVWFALLTFVGFSLRFLWLIGRSDLLHKRWVKILPHINDTGLLISGVTLA 60 Query: 61 AKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIK 120 PF+ W KL + +YIVLG L +R ++ +I F ++ + + II Sbjct: 61 IFFGYSPFAVF--WFGVKLALIALYIVLGV--LLFRTHQNRLYQITLFSMSFITYFFIII 116 Query: 121 LATTKV 126 + TK Sbjct: 117 VVLTKP 122 >UniRef50_Q0ACI6 Invasion gene expression up-regulator, SirB n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0ACI6_ALHEH Length = 131 Score = 66.9 bits (162), Expect = 2e-10, Method: Composition-based stats. Identities = 44/125 (35%), Positives = 67/125 (53%), Gaps = 4/125 (3%) Query: 4 FSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKA 63 + L H++ +S+ L LR L K + RIVP + DT+LLL+ + L+A Sbjct: 7 YFPLKHTHMLMAIISIALFVLRGLLLPIKPELLANKAVRIVPHIFDTVLLLTALGLLAVL 66 Query: 64 HILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLAT 123 + PF+ W+ K+ G+I+YIVLG IAL RR + A+ +AF A+ I +A Sbjct: 67 SLNPFAH--GWIMAKIIGLILYIVLGTIAL--RRGRTPVAKAVAFFAAVFTFAYIYAVAL 122 Query: 124 TKVPL 128 T+ PL Sbjct: 123 TRTPL 127 >UniRef50_A2SGG2 Putative uncharacterized protein n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SGG2_METPP Length = 140 Score = 64.6 bits (156), Expect = 9e-10, Method: Composition-based stats. Identities = 40/128 (31%), Positives = 57/128 (44%), Gaps = 4/128 (3%) Query: 1 MTSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALM 60 ++ + L S H+ SVGL T R + R ++D+LLL +G AL Sbjct: 4 LSQYPALKSAHMALAGASVGLFTARGLGVQWRAAWPLRAGVRRASVLIDSLLLAAGGALW 63 Query: 61 AKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIK 120 A + A WL KL ++ YIVLG AL R + + R +AF AL + I+ Sbjct: 64 AMLGLS--LAHAPWLLVKLALIVAYIVLGSFALK--RARTPRGRGLAFAGALACVLAIVA 119 Query: 121 LATTKVPL 128 A T L Sbjct: 120 TALTHDVL 127 >UniRef50_B2JWA9 Putative uncharacterized protein n=1 Tax=Burkholderia phymatum STM815 RepID=B2JWA9_BURP8 Length = 126 Score = 64.2 bits (155), Expect = 1e-09, Method: Composition-based stats. Identities = 31/122 (25%), Positives = 50/122 (40%), Gaps = 4/122 (3%) Query: 6 TLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKAHI 65 L H+ + S L R + R + V+DTLLL +G +L + Sbjct: 1 MLKFAHVTLVTASGMLFAARSIASLNDYAWPMRDAWRRLSYVIDTLLLAAGASLWLLLRL 60 Query: 66 LPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLATTK 125 P WL KL V+ Y++ G +A+ R R+ + AL++ +I +A T Sbjct: 61 NPIRD--AWLGTKLLLVVAYVIAGTLAMK--RGRPWGTRVASLGCALLLFALIASVAATH 116 Query: 126 VP 127 P Sbjct: 117 NP 118 >UniRef50_Q3IK93 Putative uncharacterized protein n=2 Tax=Alteromonadales RepID=Q3IK93_PSEHT Length = 124 Score = 62.3 bits (150), Expect = 4e-09, Method: Composition-based stats. Identities = 39/127 (30%), Positives = 59/127 (46%), Gaps = 5/127 (3%) Query: 3 SFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAK 62 + + H+ LSV L +R + R A + I +DTLLL+S + LM Sbjct: 2 DYLAVKHSHMAIAMLSVILFYVRSFSRMGSGKLAKNKLVFIGSHGIDTLLLVSALMLMGI 61 Query: 63 AHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLA 122 A I PF + WL EK+ V+IYI +G ++ + + A I L ++ + LA Sbjct: 62 AKINPF--EQYWLLEKIVLVVIYIAVGIVSSKQTKTAPKVAYTIFNTLVILAIGY---LA 116 Query: 123 TTKVPLL 129 T K LL Sbjct: 117 TAKSALL 123 >UniRef50_A7HRU5 Conserved hypothetical membrane protein n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HRU5_PARL1 Length = 136 Score = 59.6 bits (143), Expect = 3e-08, Method: Composition-based stats. Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 9/129 (6%) Query: 4 FSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARW-----TRIVPPVVDTLLLLSGIA 58 ++ + VH+ S+ S L +R + R R++ +DT+LL + + Sbjct: 5 YAEIRLVHIWSVIASGSLFAMRGLALFAGAGGTGERLAMAAPVRLLSYTIDTVLLTAALM 64 Query: 59 LMAKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYII 118 LM PF WLT K+ +++YI LG +A + R ++ RI AF AL V I Sbjct: 65 LMTIVQQYPFIDH--WLTVKVVLLVVYIALGMMAFRFGR--TRGQRIGAFAAALAVFLYI 120 Query: 119 IKLATTKVP 127 + +A P Sbjct: 121 VSVALAHDP 129 >UniRef50_Q7MFW3 Uncharacterized protein conserved in bacteria n=2 Tax=Vibrio vulnificus RepID=Q7MFW3_VIBVY Length = 127 Score = 58.4 bits (140), Expect = 7e-08, Method: Composition-based stats. Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 4/129 (3%) Query: 1 MTSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALM 60 M + LL H+ I LS LR + ++ W V V+ ++L+S IAL Sbjct: 1 MMMYLLLLKAHIGLIVLSFLSFALRAYWGFKASTWLMKEWPLKVHKVITLVMLISAIALC 60 Query: 61 AKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIK 120 PF+ WLTEKL + Y+ +A + ++Q R + + ++ +I Sbjct: 61 LTISQYPFADT--WLTEKLLLLAAYVGFAMLAFKPQL--NRQLRTVFTSVTCILFVMIFY 116 Query: 121 LATTKVPLL 129 +A T VP+L Sbjct: 117 IAKTHVPIL 125 >UniRef50_Q9CMI4 Putative uncharacterized protein n=1 Tax=Pasteurella multocida RepID=Q9CMI4_PASMU Length = 122 Score = 56.5 bits (135), Expect = 3e-07, Method: Composition-based stats. Identities = 30/122 (24%), Positives = 50/122 (40%), Gaps = 7/122 (5%) Query: 7 LLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKAHIL 66 L+ +H+ LS+ L +R ++ + +I+P + DTLL SGI L Sbjct: 5 LIYLHIACAFLSLSLFIIRGMMQLTGKNWRDRKVLKILPHLSDTLLFCSGIGLFLLFQQS 64 Query: 67 PFSGQAQWLTEKLFGVIIYIVLGFIALDYRR---MHSQQARIIAFPLALVVLYIIIKLAT 123 W K+ + +YIV+ I +R SQ+ F AL+ + +A Sbjct: 65 ----VTTWFIYKMLFIALYIVVATIFFSRKRLTSPFSQKKNRFYFITALIFFLSTMVIAY 120 Query: 124 TK 125 K Sbjct: 121 LK 122 >UniRef50_A1SV91 Putative uncharacterized protein n=2 Tax=Psychromonas RepID=A1SV91_PSYIN Length = 128 Score = 55.7 bits (133), Expect = 4e-07, Method: Composition-based stats. Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 4/127 (3%) Query: 4 FSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTR-IVPPVVDTLLLLSGIALMAK 62 +S L HL I +++ L L F+ H A + I+ T+ L+ G+ LM Sbjct: 2 YSFLKHTHLTLILIAIVLFILCFYWIVTGHKNAQKVIFKKILLHTHLTIALI-GLGLMGV 60 Query: 63 AHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLA 122 I PF Q WL EK+ I Y++L +AL+ + + R +AF + I +L Sbjct: 61 LQINPFESQNYWLIEKIGAFIGYLILVSVALNEKTR--KGMRFLAFVGVFGWIVYIGQLV 118 Query: 123 TTKVPLL 129 +K ++ Sbjct: 119 FSKQAMI 125 >UniRef50_A6F6L3 Uncharacterized protein conserved in bacteria n=1 Tax=Moritella sp. PE36 RepID=A6F6L3_9GAMM Length = 153 Score = 50.7 bits (120), Expect = 1e-05, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 43/105 (40%), Gaps = 4/105 (3%) Query: 25 RFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKAHILPFSGQAQWLTEKLFGVII 84 R + + + V++ +L+LSG AL + PF W+TEK + + Sbjct: 52 RTFWAIKGSEYINNVILFKIHKVLNLVLILSGFALCVTINQYPFVD--AWVTEKFVLLFV 109 Query: 85 YIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLATTKVPLL 129 Y+ +A + + + R + +V I +A TKV L Sbjct: 110 YVGFAMLAFKPQM--NLKVRQFCIAVTMVFFVTIFYIAKTKVALF 152 >UniRef50_B0BP11 Putative uncharacterized protein n=6 Tax=Pasteurellaceae RepID=B0BP11_ACTPJ Length = 123 Score = 50.7 bits (120), Expect = 1e-05, Method: Composition-based stats. Identities = 40/127 (31%), Positives = 60/127 (47%), Gaps = 6/127 (4%) Query: 1 MTSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALM 60 M F L+ H+ +S+ LL R L + + RI P +VDTLLL+SGIAL+ Sbjct: 1 MEFFPQLVLGHVGFAYISLILLLTRGVLASKMVDWRQYKVLRIAPHIVDTLLLVSGIALL 60 Query: 61 AKAHILPF--SGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYII 118 A + QWL K+ +++YIV A SQ + F LA+V + Sbjct: 61 AILLSNGIYALNEMQWLIPKIAFLVLYIVFSVKAFK----KSQLFSLKNFILAVVSFMLA 116 Query: 119 IKLATTK 125 + +AT + Sbjct: 117 MLVATLR 123 >UniRef50_Q65SI4 Putative uncharacterized protein n=1 Tax=Mannheimia succiniciproducens MBEL55E RepID=Q65SI4_MANSM Length = 116 Score = 50.0 bits (118), Expect = 3e-05, Method: Composition-based stats. Identities = 29/114 (25%), Positives = 50/114 (43%), Gaps = 4/114 (3%) Query: 5 STLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKAH 64 +TLL H+ LS+ LL +R +++ Q + +I P + DTLL+LSG+AL+ Sbjct: 3 TTLLQTHITFAFLSLMLLIVRGYMQLQGKDWRTVKLLKITPHLADTLLVLSGVALVFVFG 62 Query: 65 ILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYII 118 G WL K+ +++Y + S +I A + + Sbjct: 63 Y----GLQMWLIGKVLLLVLYAFFSAKFFQKNAVKSNILFLILALSAFLAAMYL 112 >UniRef50_P44139 Uncharacterized protein HI1253 n=20 Tax=Pasteurellaceae RepID=Y1253_HAEIN Length = 127 Score = 49.2 bits (116), Expect = 4e-05, Method: Composition-based stats. Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 7/121 (5%) Query: 5 STLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKAH 64 L+ +H+ LS+ LL +R ++ + +I+P + DTLL++SG+ ++ Sbjct: 14 IMLVHLHIFFAFLSLALLVIRGAMQLNGKNWRSIKLLKILPHLSDTLLIVSGVVILYLFA 73 Query: 65 ILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLATT 124 G WL K +I+YIV + + F LA V + +A Sbjct: 74 F----GIEWWLVAKFALLILYIVFAAKFFSKKVSQPKSI---FFWLACVSFIGAMLIAYL 126 Query: 125 K 125 K Sbjct: 127 K 127 >UniRef50_A7JTS0 Putative uncharacterized protein n=2 Tax=Mannheimia haemolytica RepID=A7JTS0_PASHA Length = 123 Score = 46.9 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 38/127 (29%), Positives = 57/127 (44%), Gaps = 6/127 (4%) Query: 1 MTSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALM 60 M ST+L H+ +S+ LL R +L + + RI P VDT LL++GIA + Sbjct: 1 MEYLSTILKAHIGLAYISLILLLTRGFLSSKMVDWRQYKILRIAPHAVDTFLLITGIAAV 60 Query: 61 AKAHILPF--SGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYII 118 A F Q WL KL +++YIV A Q + + LA+V ++ Sbjct: 61 AIFLAYDFFTLAQFSWLLPKLLFLVLYIVFATKAFK----KGQPFSLKFYLLAVVSFLLM 116 Query: 119 IKLATTK 125 + AT Sbjct: 117 MLTATFH 123 >UniRef50_Q2BGW5 Invasion gene expression up-regulator, SirB n=1 Tax=Neptuniibacter caesariensis RepID=Q2BGW5_9GAMM Length = 124 Score = 46.9 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 2/119 (1%) Query: 6 TLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKAHI 65 LL VH+ ++ LS+ + R L + A + ++ L++L+ L Sbjct: 4 ILLKVHMAAVVLSLLVFLGRAVLTFAGSELARKKAVLMLAMATMVLVVLTAAGLAVSLGQ 63 Query: 66 LPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLATT 124 PF WLTEK FG+++YIVL +L ++ +I LA L + + + T Sbjct: 64 FPFVD--GWLTEKFFGLLVYIVLAIASLKPGVATLKRIPMIILSLAGFALAMSVAVTRT 120 >UniRef50_A4C9H2 Tryptophanyl-tRNA synthetase n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C9H2_9GAMM Length = 119 Score = 44.2 bits (103), Expect = 0.001, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 43/97 (44%), Gaps = 3/97 (3%) Query: 30 YQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKAHILPFSGQAQWLTEKLFGVIIYIVLG 89 + + + +I P ++ TL + + I L+A + + W T KL G + Y++ Sbjct: 1 MKGSDKVNNKLLKIGPHILYTLFVCTFIYLVAVNPLNLYPFTNGWATSKLAGFVFYVLSI 60 Query: 90 FIALDYRRMHSQQARIIAFPLALVVLYIIIKLATTKV 126 +AL ++ RI+ F A+ L + +LA Sbjct: 61 TLALKSKKT---LWRIVGFISAIFWLAMTGRLAFAHH 94 >UniRef50_C5S2A3 Putative uncharacterized protein n=2 Tax=Actinobacillus minor RepID=C5S2A3_9PAST Length = 124 Score = 44.2 bits (103), Expect = 0.001, Method: Composition-based stats. Identities = 31/121 (25%), Positives = 50/121 (41%), Gaps = 6/121 (4%) Query: 7 LLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKAHIL 66 L+ H LS+ LL R L + + I P +VDTLLLLSG +++ Sbjct: 8 LIHSHAGFAYLSLILLLTRGALSAKGVNWRKVKVLLIAPHLVDTLLLLSGAIVVSVYLSN 67 Query: 67 PF--SGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLATT 124 + WL K +++YIV A +Q + + LA+V + + +A Sbjct: 68 GIYTLSELSWLLGKFLFIVLYIVFSAKAFK----KTQPFSLKFYLLAVVSFMMAMMIAVM 123 Query: 125 K 125 Sbjct: 124 H 124 >UniRef50_A6V035 Invasion gene expression up-regulator, SirB n=3 Tax=Pseudomonas aeruginosa RepID=A6V035_PSEA7 Length = 118 Score = 43.8 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 30/116 (25%), Positives = 45/116 (38%), Gaps = 5/116 (4%) Query: 4 FSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKA 63 + L ++H+ S L R + + R R P +VDTLLLLS + L+ A Sbjct: 2 YLWLKTLHITFALSSAALFAWRLAWNWSGRKNSGIR--RWGPHLVDTLLLLSALGLVHLA 59 Query: 64 HILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIII 119 P WL KL ++ YIV AL R + L ++ + Sbjct: 60 MPWPL---PLWLQAKLGLLLGYIVCAAFALRMARGIGKGLLSALSLALLGGIFYLA 112 >UniRef50_Q12MT8 Putative uncharacterized protein n=1 Tax=Shewanella denitrificans OS217 RepID=Q12MT8_SHEDO Length = 124 Score = 40.7 bits (94), Expect = 0.014, Method: Composition-based stats. Identities = 35/126 (27%), Positives = 54/126 (42%), Gaps = 4/126 (3%) Query: 4 FSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKA 63 ++ LL HLI + LS+ LR Y +V LLLLS + L Sbjct: 2 YAMLLKTHLILVGLSMFSFILRSSWAYYYPHLLANEIALKSHKIVTLLLLLSALLLCISL 61 Query: 64 HILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLAT 123 PF WLTEKL +++Y+ +A + R + R + A V L +++ +A Sbjct: 62 GQYPFVD--AWLTEKLVLLVLYVAAALMAFNSRLAP--KVRGLVIMTACVSLVLMVIIAK 117 Query: 124 TKVPLL 129 T L+ Sbjct: 118 THSSLV 123 >UniRef50_Q1Q912 Putative uncharacterized protein n=3 Tax=Psychrobacter RepID=Q1Q912_PSYCK Length = 119 Score = 40.7 bits (94), Expect = 0.015, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 50/120 (41%), Gaps = 5/120 (4%) Query: 7 LLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKAHIL 66 + +H++ L + L + +L + QA R +I ++ +++LSG+ + ++ Sbjct: 1 MKHLHMLMAVLLIVLFLYQSYLVLSANKQA-PRVVKISSHILYAVMILSGVGM--LMQLM 57 Query: 67 PFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLATTKV 126 + QW+ K+ ++ I A + + R +A I+ LA TK Sbjct: 58 SANAPVQWVFAKIILLVAAISASIKAFNN--TATPSQRKTGILIAGAAYVGIVILAFTKP 115 >UniRef50_UPI0001699E53 hypothetical protein Epers_14047 n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001699E53 Length = 63 Score = 40.7 bits (94), Expect = 0.016, Method: Composition-based stats. Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 2/53 (3%) Query: 76 TEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLATTKVPL 128 T KL + YIV+G IAL R S+ RI A P+A+ II + T+ PL Sbjct: 1 TAKLLALFAYIVIGSIALK--RGPSRTIRIFAGPIAIACYLYIIAVGLTRQPL 51 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_C9XTV6 Protein sirB2 n=4 Tax=Enterobacteriaceae RepID=C... 118 9e-26 UniRef50_Q2BLP8 Putative membrane protein n=1 Tax=Neptuniibacter... 110 1e-23 UniRef50_C7RNU8 Invasion gene expression up-regulator SirB n=1 T... 107 9e-23 UniRef50_Q2Y7A0 Invasion gene expression up-regulator, SirB n=4 ... 106 2e-22 UniRef50_A1VLW7 Invasion gene expression up-regulator, SirB n=4 ... 106 3e-22 UniRef50_Q21X92 Invasion gene expression up-regulator, SirB n=2 ... 106 3e-22 UniRef50_Q46755 Protein sirB2 n=63 Tax=Enterobacteriaceae RepID=... 105 4e-22 UniRef50_Q2SBR9 Uncharacterized protein conserved in bacteria n=... 105 5e-22 UniRef50_B5FBX2 Transcriptional regulator n=49 Tax=Vibrionales R... 104 7e-22 UniRef50_A0KT91 Invasion gene expression up-regulator, SirB n=28... 102 3e-21 UniRef50_Q3J8K9 Invasion gene expression up-regulator, SirB n=2 ... 102 3e-21 UniRef50_Q15SR2 Invasion gene expression up-regulator, SirB n=1 ... 99 4e-20 UniRef50_B1Y4A7 Invasion gene expression up-regulator SirB n=2 T... 99 5e-20 UniRef50_P0A238 Protein sirB2 n=80 Tax=Gammaproteobacteria RepID... 97 1e-19 UniRef50_Q1N6F9 Invasion gene expression up-regulator, SirB n=1 ... 97 1e-19 UniRef50_Q5P0W4 Predicted Invasion gene expression up-regulator,... 97 2e-19 UniRef50_C6P0M9 Invasion gene expression up-regulator SirB n=1 T... 96 5e-19 UniRef50_Q47Y96 SirB family protein n=1 Tax=Colwellia psychreryt... 96 5e-19 UniRef50_A4BIA2 Putative uncharacterized protein n=1 Tax=Reineke... 94 2e-18 UniRef50_C1D4W3 Invasion gene expression up-regulator, SirB n=1 ... 93 2e-18 UniRef50_A4SK66 Transcriptional regulator n=2 Tax=Aeromonas RepI... 93 4e-18 UniRef50_A4SSR6 Membrane protein n=4 Tax=Gammaproteobacteria Rep... 92 4e-18 UniRef50_A6FEA7 Putative membrane protein n=1 Tax=Moritella sp. ... 92 6e-18 UniRef50_C7R602 Invasion gene expression up-regulator SirB n=1 T... 91 1e-17 UniRef50_B4RK15 Regulator n=25 Tax=Neisseria RepID=B4RK15_NEIG2 90 3e-17 UniRef50_B3PJ86 Putative membrane protein n=1 Tax=Cellvibrio jap... 89 4e-17 UniRef50_D0KXB0 Invasion gene expression up-regulator SirB n=1 T... 89 5e-17 UniRef50_B4RSV2 Invasion gene expression up-regulator, SirB n=2 ... 87 1e-16 UniRef50_A1WZQ3 Invasion gene expression up-regulator, SirB n=1 ... 86 3e-16 UniRef50_UPI0000E0E158 invasion gene expression up-regulator, Si... 86 3e-16 UniRef50_B9YZ33 Invasion gene expression up-regulator SirB n=2 T... 86 3e-16 UniRef50_Q21KQ5 Invasion gene expression up-regulator, SirB n=1 ... 85 1e-15 UniRef50_C4GIH0 Putative uncharacterized protein n=1 Tax=Kingell... 83 2e-15 UniRef50_C5BLU0 Protein SirB n=1 Tax=Teredinibacter turnerae T79... 83 3e-15 UniRef50_Q5QV01 Uncharacterized conserved membrane protein n=2 T... 83 4e-15 UniRef50_Q3IK93 Putative uncharacterized protein n=2 Tax=Alterom... 83 4e-15 UniRef50_B2JWA9 Putative uncharacterized protein n=1 Tax=Burkhol... 81 1e-14 UniRef50_C0DTE2 Putative uncharacterized protein n=1 Tax=Eikenel... 81 1e-14 UniRef50_A2SGG2 Putative uncharacterized protein n=1 Tax=Methyli... 80 3e-14 UniRef50_A1U5E9 Invasion gene expression up-regulator, SirB n=2 ... 80 3e-14 UniRef50_A1SV91 Putative uncharacterized protein n=2 Tax=Psychro... 80 3e-14 UniRef50_B4S0W7 Invasion gene expression up-regulator, SirB n=1 ... 79 4e-14 UniRef50_Q7MFW3 Uncharacterized protein conserved in bacteria n=... 79 4e-14 UniRef50_Q9CMI4 Putative uncharacterized protein n=1 Tax=Pasteur... 78 1e-13 UniRef50_A4BQT9 Putative uncharacterized protein n=1 Tax=Nitroco... 76 5e-13 UniRef50_Q0ACI6 Invasion gene expression up-regulator, SirB n=1 ... 75 7e-13 UniRef50_B0BP11 Putative uncharacterized protein n=6 Tax=Pasteur... 73 2e-12 UniRef50_A6F6L3 Uncharacterized protein conserved in bacteria n=... 71 9e-12 UniRef50_Q0F0D8 Putative uncharacterized protein n=1 Tax=Maripro... 70 2e-11 UniRef50_A7HRU5 Conserved hypothetical membrane protein n=1 Tax=... 68 9e-11 UniRef50_P44139 Uncharacterized protein HI1253 n=20 Tax=Pasteure... 68 1e-10 UniRef50_A4C9H2 Tryptophanyl-tRNA synthetase n=1 Tax=Pseudoalter... 67 1e-10 UniRef50_C5S2A3 Putative uncharacterized protein n=2 Tax=Actinob... 67 2e-10 UniRef50_A7JTS0 Putative uncharacterized protein n=2 Tax=Mannhei... 66 4e-10 UniRef50_Q65SI4 Putative uncharacterized protein n=1 Tax=Mannhei... 65 8e-10 UniRef50_Q2BGW5 Invasion gene expression up-regulator, SirB n=1 ... 61 1e-08 UniRef50_A6V035 Invasion gene expression up-regulator, SirB n=3 ... 59 3e-08 Sequences not found previously or not previously below threshold: UniRef50_Q12MT8 Putative uncharacterized protein n=1 Tax=Shewane... 52 8e-06 UniRef50_Q1Q912 Putative uncharacterized protein n=3 Tax=Psychro... 48 7e-05 UniRef50_UPI0001699E53 hypothetical protein Epers_14047 n=1 Tax=... 40 0.019 UniRef50_B0V6Q2 Putative uncharacterized protein n=17 Tax=Acinet... 40 0.020 UniRef50_B5JTU7 Putative uncharacterized protein n=1 Tax=gamma p... 40 0.025 UniRef50_A6F6J6 Putative uncharacterized protein n=1 Tax=Moritel... 40 0.030 >UniRef50_C9XTV6 Protein sirB2 n=4 Tax=Enterobacteriaceae RepID=C9XTV6_CROTZ Length = 131 Score = 118 bits (295), Expect = 9e-26, Method: Composition-based stats. Identities = 75/130 (57%), Positives = 95/130 (73%), Gaps = 1/130 (0%) Query: 1 MTSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALM 60 M ++ + +H++++ +S+ L LR+W +Y+ P + RW RIVP V DT+LL SG+AL+ Sbjct: 1 MAAYFAVKHLHILTVVISISLFILRYWWQYRSSPMSSKRWVRIVPHVNDTVLLGSGVALV 60 Query: 61 AKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIK 120 H PF+ Q WLTEKLFGVIIYIVLGFIAL RR SQQ R IAF L LVVLYII+K Sbjct: 61 LITHFYPFTPQGAWLTEKLFGVIIYIVLGFIALG-RRPRSQQVRWIAFLLGLVVLYIIVK 119 Query: 121 LATTKVPLLG 130 LATTK+PLLG Sbjct: 120 LATTKIPLLG 129 >UniRef50_Q2BLP8 Putative membrane protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BLP8_9GAMM Length = 125 Score = 110 bits (276), Expect = 1e-23, Method: Composition-based stats. Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 4/126 (3%) Query: 3 SFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAK 62 + + +HL I LS+ L LR + +W ++VP +DTLLL+S I L A Sbjct: 1 MYLAIKHIHLTCIVLSLSLFLLRGYWALFSPSHLQRKWVKVVPHCIDTLLLISAITLAAL 60 Query: 63 AHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLA 122 PF WLT K+ ++ YI G A+ R ++ ++ + LAL+ I+ +A Sbjct: 61 LQQYPFIDH--WLTAKVVALLAYIGFGTFAIK--RGKTRSSKALFLVLALLCFGYIVVVA 116 Query: 123 TTKVPL 128 PL Sbjct: 117 INHNPL 122 >UniRef50_C7RNU8 Invasion gene expression up-regulator SirB n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNU8_9PROT Length = 130 Score = 107 bits (268), Expect = 9e-23, Method: Composition-based stats. Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 4/127 (3%) Query: 2 TSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMA 61 ++ L +H+ + LS LR ++ R+ P V+DT+LL S +A+ Sbjct: 1 MTYLILKQIHISCVVLSGSGFVLRGVWTLRQSSWLRRPAVRVWPHVIDTVLLASAVAMAV 60 Query: 62 KAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKL 121 + PFS WLT KL G++IYI G +AL R ++Q R F AL+ I+ + Sbjct: 61 MSTQYPFSAN--WLTAKLIGLLIYIGCGTMALKRARHNAQ--RAAFFAAALLAFAYIVSV 116 Query: 122 ATTKVPL 128 A T+ PL Sbjct: 117 ALTRNPL 123 >UniRef50_Q2Y7A0 Invasion gene expression up-regulator, SirB n=4 Tax=Nitrosomonadaceae RepID=Q2Y7A0_NITMU Length = 129 Score = 106 bits (265), Expect = 2e-22, Method: Composition-based stats. Identities = 43/126 (34%), Positives = 67/126 (53%), Gaps = 4/126 (3%) Query: 2 TSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMA 61 S++ + +H+ S+ +S L +LR Q RW +I P VVDT+LL S +AL Sbjct: 1 MSYAVIKMIHVGSVIISYLLFSLRSIWMIQGSADLKRRWVKITPHVVDTVLLASAVALAV 60 Query: 62 KAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKL 121 + H P WL+ K+ G+++YI LG AL + +++A+I A A V I+ + Sbjct: 61 RIHQDP--VHDSWLSAKVVGLLLYIGLGMTALRF--GKTRKAKISACVAAQFVFIYIVLV 116 Query: 122 ATTKVP 127 A TK P Sbjct: 117 ALTKNP 122 >UniRef50_A1VLW7 Invasion gene expression up-regulator, SirB n=4 Tax=Betaproteobacteria RepID=A1VLW7_POLNA Length = 155 Score = 106 bits (264), Expect = 3e-22, Method: Composition-based stats. Identities = 39/127 (30%), Positives = 58/127 (45%), Gaps = 4/127 (3%) Query: 4 FSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKA 63 + + +H+ LS LR P RW ++VP VDTLLL S + L+ + Sbjct: 25 YLAIKHLHITFAVLSGSFFLLRGLWMLADSPMLQRRWVKVVPHAVDTLLLASALVLVFWS 84 Query: 64 HILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLAT 123 PF WLT K+ ++ YIVLG +AL R ++ R A AL I+ +A Sbjct: 85 GQYPFV--QPWLTAKVLALVAYIVLGTVALK--RGKTKGVRAFALLAALATFAYIVAVAL 140 Query: 124 TKVPLLG 130 T+ + Sbjct: 141 TRQAAIA 147 >UniRef50_Q21X92 Invasion gene expression up-regulator, SirB n=2 Tax=Betaproteobacteria RepID=Q21X92_RHOFD Length = 127 Score = 106 bits (264), Expect = 3e-22, Method: Composition-based stats. Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 4/129 (3%) Query: 2 TSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMA 61 + + +H+ + LSV L LR L P R ++ P V+DT LL + + L Sbjct: 1 MDYLFVKYLHVTCVVLSVSLFVLRGSLELLAQPWRQWRLLKVAPHVIDTTLLTAALWLAW 60 Query: 62 KAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKL 121 + PF WLT K+ ++ YI+LG AL R Q+ R+ F AL+ + I+ + Sbjct: 61 RIGQYPFVN--GWLTAKVLALLAYILLGMRALGKRT--PQEQRLPFFLGALLSVGYIVGV 116 Query: 122 ATTKVPLLG 130 A T P G Sbjct: 117 ALTHSPSWG 125 >UniRef50_Q46755 Protein sirB2 n=63 Tax=Enterobacteriaceae RepID=SIRB2_ECOLI Length = 130 Score = 105 bits (263), Expect = 4e-22, Method: Composition-based stats. Identities = 130/130 (100%), Positives = 130/130 (100%) Query: 1 MTSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALM 60 MTSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALM Sbjct: 1 MTSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALM 60 Query: 61 AKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIK 120 AKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIK Sbjct: 61 AKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIK 120 Query: 121 LATTKVPLLG 130 LATTKVPLLG Sbjct: 121 LATTKVPLLG 130 >UniRef50_Q2SBR9 Uncharacterized protein conserved in bacteria n=3 Tax=Proteobacteria RepID=Q2SBR9_HAHCH Length = 127 Score = 105 bits (262), Expect = 5e-22, Method: Composition-based stats. Identities = 43/125 (34%), Positives = 64/125 (51%), Gaps = 4/125 (3%) Query: 2 TSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMA 61 S+ L +H+ +AL+ TLRF P + ++++P ++DTLLLLS I L Sbjct: 1 MSYMLLKHIHMTCVALTFASFTLRFIWMILGSPLLQHKLSKVLPHIIDTLLLLSAIGLAL 60 Query: 62 KAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKL 121 K PF WLT K+ G+IIYI LG AL R +++ R++ A I+ + Sbjct: 61 KLQQYPF--HNGWLTAKVVGLIIYIALGVFALK--RGKTKRTRVLFGLGAYTAFAYIVMV 116 Query: 122 ATTKV 126 A TK Sbjct: 117 ALTKS 121 >UniRef50_B5FBX2 Transcriptional regulator n=49 Tax=Vibrionales RepID=B5FBX2_VIBFM Length = 127 Score = 104 bits (261), Expect = 7e-22, Method: Composition-based stats. Identities = 40/127 (31%), Positives = 68/127 (53%), Gaps = 2/127 (1%) Query: 3 SFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAK 62 ++ + +HL+ +A SV +R+ L + + VP VVD+ +LLSGI L+ Sbjct: 1 MYTAVKHIHLLLVACSVLFFVVRYCLMMANSDIRNNGFFKRVPHVVDSAMLLSGIWLIFI 60 Query: 63 AHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLA 122 +PF+ A WLTEK+ +++Y+ LG + L+ ++ + AF A+ L + K+A Sbjct: 61 TGFIPFTSSAPWLTEKITCIMVYLALGVVTLNN--GKNKVFKTFAFLGAMGWLMVAAKIA 118 Query: 123 TTKVPLL 129 TKVP Sbjct: 119 VTKVPTF 125 >UniRef50_A0KT91 Invasion gene expression up-regulator, SirB n=28 Tax=Gammaproteobacteria RepID=A0KT91_SHESA Length = 131 Score = 102 bits (255), Expect = 3e-21, Method: Composition-based stats. Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 4/128 (3%) Query: 2 TSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMA 61 + + + +HL IA+SV +RF L ++ + +I P V+DT LLLSG+ L Sbjct: 6 SLYPAVKHLHLTLIAVSVLFFVVRFVLHLRQSALMGKKVFKIAPHVIDTFLLLSGLTLCF 65 Query: 62 KAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKL 121 PF WLTEK+ V+ YI LG IA+ R ++ ++ AF AL L KL Sbjct: 66 MIKQYPFVD--PWLTEKIGAVLAYIALGVIAIKANR--NKLFKVFAFLGALGWLVYAAKL 121 Query: 122 ATTKVPLL 129 A K +L Sbjct: 122 AHFKQAVL 129 >UniRef50_Q3J8K9 Invasion gene expression up-regulator, SirB n=2 Tax=Nitrosococcus oceani RepID=Q3J8K9_NITOC Length = 129 Score = 102 bits (255), Expect = 3e-21, Method: Composition-based stats. Identities = 46/127 (36%), Positives = 66/127 (51%), Gaps = 4/127 (3%) Query: 1 MTSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALM 60 MT + TL +HL S+ ++ L R RW R+VPP+VDT+LL S I L Sbjct: 2 MTVYLTLKYIHLTSVVTTLVLFVGRGLWMLSSSHYLQRRWVRLVPPIVDTVLLASAIGLT 61 Query: 61 AKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIK 120 H PF WLT K+ +I YIV G IAL Y ++ RI A +A+++ ++ Sbjct: 62 LVLHQYPFVN--DWLTAKILALIGYIVFGSIALKY--GRTRSVRIGAGCIAMILFTYMVW 117 Query: 121 LATTKVP 127 +A +K P Sbjct: 118 VARSKTP 124 >UniRef50_Q15SR2 Invasion gene expression up-regulator, SirB n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15SR2_PSEA6 Length = 125 Score = 99.1 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 38/127 (29%), Positives = 62/127 (48%), Gaps = 4/127 (3%) Query: 3 SFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAK 62 ++ + +HL IALSV L +RF+ +W +I P +VDTLL+LS L Sbjct: 1 MYTAVKHIHLTCIALSVLLFVIRFFWTMTSSSMLQKKWVKITPHIVDTLLILSAATLCVM 60 Query: 63 AHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLA 122 PF W+TEK G+++Y+ +AL + + R++ AL + +A Sbjct: 61 ISQYPFV--TPWVTEKFVGLLMYVF--MVALALKMARTNFMRVVGLVGALSWIAFTALVA 116 Query: 123 TTKVPLL 129 +K P+L Sbjct: 117 ISKQPIL 123 >UniRef50_B1Y4A7 Invasion gene expression up-regulator SirB n=2 Tax=Burkholderiales RepID=B1Y4A7_LEPCP Length = 133 Score = 98.8 bits (245), Expect = 5e-20, Method: Composition-based stats. Identities = 40/126 (31%), Positives = 62/126 (49%), Gaps = 4/126 (3%) Query: 2 TSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMA 61 + TL +H ++ LS+G LR W R + +P ++D++LL S I L Sbjct: 4 MDYLTLKLIHQSAVVLSIGGFVLRGWASLNGQAWVRGRAAKTLPHLIDSVLLASAITLAW 63 Query: 62 KAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKL 121 A ++P+ WL K+ G+++YI LG IAL + R A+ ALV I+ + Sbjct: 64 LAGLVPW--HTPWLMSKIVGLLVYIGLGMIALK--PGRDLRLRWAAWLGALVTFGFIVSV 119 Query: 122 ATTKVP 127 A TK P Sbjct: 120 AITKQP 125 >UniRef50_P0A238 Protein sirB2 n=80 Tax=Gammaproteobacteria RepID=SIRB2_SALTI Length = 129 Score = 97.2 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 94/129 (72%), Positives = 105/129 (81%) Query: 2 TSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMA 61 + + LL++HLI +ALSV L R+W RY H A ARWTRIVPPV+DTLLLLSGI L+ Sbjct: 1 MTIAMLLTLHLICVALSVSLFVARYWWRYCGHALAAARWTRIVPPVIDTLLLLSGIGLIV 60 Query: 62 KAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKL 121 K HILPF+ WLTEKLFGVIIYIVLGFIALDYR+ SQQAR IAFPLALVVLYIIIKL Sbjct: 61 KTHILPFTESGSWLTEKLFGVIIYIVLGFIALDYRQARSQQARFIAFPLALVVLYIIIKL 120 Query: 122 ATTKVPLLG 130 ATTK+PLLG Sbjct: 121 ATTKIPLLG 129 >UniRef50_Q1N6F9 Invasion gene expression up-regulator, SirB n=1 Tax=Bermanella marisrubri RepID=Q1N6F9_9GAMM Length = 130 Score = 97.2 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 5/127 (3%) Query: 2 TSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMA 61 T + + HL+ +ALS+ +R + +W +I P ++DT LL +GIAL Sbjct: 3 TLYIAMKHSHLLLVALSLSFFVIRGIALLMQAGWLQKKWAKISPHIIDTFLLATGIALTV 62 Query: 62 KAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKL 121 H P S WLT K+ ++ YI+ G + + R F A++ + +++ + Sbjct: 63 ITHQYPISDH--WLTAKMVFLVGYILFGIKMMK---TDNVMLRRSFFAAAIICIIMMVTI 117 Query: 122 ATTKVPL 128 A T PL Sbjct: 118 ARTHHPL 124 >UniRef50_Q5P0W4 Predicted Invasion gene expression up-regulator, SirB n=2 Tax=Rhodocyclaceae RepID=Q5P0W4_AZOSE Length = 131 Score = 96.8 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 43/125 (34%), Positives = 66/125 (52%), Gaps = 4/125 (3%) Query: 3 SFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAK 62 ++ + +H++ LS L+ ++ P R TR+VP VVDT+ L S I L Sbjct: 1 MYAAIKHLHILCAMLSGSGFLLQGIWMMRRSPLLDHRATRVVPHVVDTVFLASAITLAVL 60 Query: 63 AHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLA 122 + PF A W+T K+ G+++Y+VLG+IAL R + RI A AL+V I+ +A Sbjct: 61 SAQYPFV--APWVTAKVIGLVVYVVLGYIAL--RGGATMGIRIFALICALLVFSWIVSVA 116 Query: 123 TTKVP 127 TK Sbjct: 117 LTKNA 121 >UniRef50_C6P0M9 Invasion gene expression up-regulator SirB n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P0M9_9PROT Length = 139 Score = 95.7 bits (237), Expect = 5e-19, Method: Composition-based stats. Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 4/124 (3%) Query: 5 STLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKAH 64 L VH+ + LS L LR + W ++ P +VDT L+LS I L + Sbjct: 15 PLLKLVHIGCVILSYSLFFLRGVWMLRDSSSLQQHWVKVAPHIVDTALILSAITLAWQLG 74 Query: 65 ILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLATT 124 I P + A WL K+ +++YI +G +AL +++ R+I++ +A ++ + ++ +A T Sbjct: 75 ISPLA--APWLAAKIVALLLYIAVGMMALK--LGKTKRVRLISWLMAQLLFFYMVSVAVT 130 Query: 125 KVPL 128 PL Sbjct: 131 HDPL 134 >UniRef50_Q47Y96 SirB family protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47Y96_COLP3 Length = 121 Score = 95.7 bits (237), Expect = 5e-19, Method: Composition-based stats. Identities = 38/123 (30%), Positives = 64/123 (52%), Gaps = 4/123 (3%) Query: 7 LLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKAHIL 66 + +H+ LS+ L T RF L +W +I P V+DT LL++GI+L K H+ Sbjct: 1 MKHLHITLAVLSISLFTYRFILTLMASKNLDRKWLKISPHVIDTFLLIAGISLAVKLHLN 60 Query: 67 PFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLATTKV 126 P + WL EK+ + YI G+ L R ++ +I+ F A+ + +I++LA T+ Sbjct: 61 PM--EQMWLAEKILALFAYIFTGYYTLKLAR--NRPMQILGFLGAMGWVMLIVRLAITRE 116 Query: 127 PLL 129 + Sbjct: 117 AMF 119 >UniRef50_A4BIA2 Putative uncharacterized protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BIA2_9GAMM Length = 124 Score = 93.8 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 31/125 (24%), Positives = 60/125 (48%), Gaps = 4/125 (3%) Query: 3 SFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAK 62 + + +H+ +S+ +R L +H +W RI+P ++DT L+++ I L Sbjct: 1 MYLMIKHLHMTLALISILGFIVRGALAINQHSIMQQKWIRILPHIIDTGLIVAAIYLAWF 60 Query: 63 AHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLA 122 + P + WL K+ +++YIVLG + R S +A+ + + A+ I +A Sbjct: 61 LRLNPIT--QPWLAVKIVALVVYIVLGARVIK--RRGSVKAQWVTYAAAIATFAYIGAVA 116 Query: 123 TTKVP 127 T+ P Sbjct: 117 MTRSP 121 >UniRef50_C1D4W3 Invasion gene expression up-regulator, SirB n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D4W3_LARHH Length = 126 Score = 93.4 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 42/126 (33%), Positives = 60/126 (47%), Gaps = 4/126 (3%) Query: 2 TSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMA 61 S+ L H L++ T+R AR TRIVP V+DT LL+ GI L Sbjct: 1 MSYLALKGAHAGFAYLTLLSFTIRGIWMLTDSRLLTARLTRIVPHVIDTALLVLGIWLAW 60 Query: 62 KAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKL 121 A P WL K+ +++Y+ LG +AL R S+ R A+ ++L V+ II + Sbjct: 61 SARFNPL--NEPWLMAKIVLLLVYVGLGSVAL--RPGRSKAVRTAAYVISLAVVVSIIII 116 Query: 122 ATTKVP 127 A TK Sbjct: 117 AKTKPA 122 >UniRef50_A4SK66 Transcriptional regulator n=2 Tax=Aeromonas RepID=A4SK66_AERS4 Length = 147 Score = 92.6 bits (229), Expect = 4e-18, Method: Composition-based stats. Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 2/127 (1%) Query: 3 SFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAK 62 + L +HL+ IA +V + LRF+ +A++ V ++ L++LSG+ L Sbjct: 21 MYFALKHLHLVLIASAVLMFMLRFYWVQTGSGRAYSDQIMKVSGWLNGLVVLSGVLLCMV 80 Query: 63 AHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLA 122 + P + WL+EKL +++ L +AL R + R AF A+ ++ I KLA Sbjct: 81 LDLNPLNNGTPWLSEKLTAILVVAFLAMMAL--RLACNNGIRWFAFLGAIGWVFFIAKLA 138 Query: 123 TTKVPLL 129 K L Sbjct: 139 VYKQASL 145 >UniRef50_A4SSR6 Membrane protein n=4 Tax=Gammaproteobacteria RepID=A4SSR6_AERS4 Length = 128 Score = 92.2 bits (228), Expect = 4e-18, Method: Composition-based stats. Identities = 38/127 (29%), Positives = 60/127 (47%), Gaps = 5/127 (3%) Query: 1 MTSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALM 60 + + L +H+ +S+ L R+ L P+ RW +I P V DT LLL G+ L Sbjct: 2 IAYYPLLKHLHMTLAIVSLLLFVYRWMLSLNASPRLQQRWLKIAPHVNDTFLLLFGVLLA 61 Query: 61 AKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIK 120 + P Q WL KL +++YI LG +AL ++ +++A AL V ++ Sbjct: 62 VTLQMSP--SQQPWLMAKLIALVVYIGLGVMALK---RPARSQKLMAGVAALAVFGYMVG 116 Query: 121 LATTKVP 127 A TK Sbjct: 117 AAMTKSA 123 >UniRef50_A6FEA7 Putative membrane protein n=1 Tax=Moritella sp. PE36 RepID=A6FEA7_9GAMM Length = 129 Score = 91.8 bits (227), Expect = 6e-18, Method: Composition-based stats. Identities = 32/127 (25%), Positives = 59/127 (46%), Gaps = 4/127 (3%) Query: 2 TSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMA 61 ++ + +H+ LS+ R L + + +I+P ++D+LL+L LM Sbjct: 1 MDYAFVKHMHMGMAYLSITFFIFRSVLSVTESALLQNKVIKILPHIIDSLLILLAGHLMM 60 Query: 62 KAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKL 121 PF+ WLT KL G+I YI++G IA+ R + R+ + A+ + I+ + Sbjct: 61 TIQQYPFAD--AWLTAKLIGLIAYIIVGTIAIK--RGKTAIIRLWSSVAAVAIFAYILGV 116 Query: 122 ATTKVPL 128 A + Sbjct: 117 AKNHDVM 123 >UniRef50_C7R602 Invasion gene expression up-regulator SirB n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R602_KANKD Length = 121 Score = 91.1 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 36/125 (28%), Positives = 55/125 (44%), Gaps = 5/125 (4%) Query: 5 STLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKAH 64 L H+ AL+V +R ++ + +I+P V+DT LL SGI LM + Sbjct: 2 LALKHFHMSLAALTVLGFLIRSVWLFRGSQLLQKKVVKILPHVIDTFLLASGIVLMVQTK 61 Query: 65 ILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLATT 124 + P WLT K+ ++ YI+ G R+ F LAL + ++ LA Sbjct: 62 MYP--HHQPWLTVKILLIVTYILFGIKMFHATESKK---RLTFFALALASVLAVLYLARV 116 Query: 125 KVPLL 129 K PL Sbjct: 117 KPPLW 121 >UniRef50_B4RK15 Regulator n=25 Tax=Neisseria RepID=B4RK15_NEIG2 Length = 124 Score = 89.5 bits (221), Expect = 3e-17, Method: Composition-based stats. Identities = 33/125 (26%), Positives = 63/125 (50%), Gaps = 4/125 (3%) Query: 2 TSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMA 61 + + H I + +++ + +RF+L ++ + + + +P + DT+LL +G+ LM Sbjct: 1 MQYLIVKYSHQIFVTITILVFNIRFFLLWKNPEKPLVGFWKALPHLNDTMLLFTGLWLMK 60 Query: 62 KAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKL 121 H PF A WL K+ + YI LG + + R ++ + + LA+ + I+ L Sbjct: 61 ITHFSPF--NAPWLGTKILLLFAYIALGMVMMRARPRSTKFYTV--YLLAMCCIACIVYL 116 Query: 122 ATTKV 126 A TKV Sbjct: 117 AKTKV 121 >UniRef50_B3PJ86 Putative membrane protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PJ86_CELJU Length = 127 Score = 89.1 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 5/126 (3%) Query: 3 SFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAK 62 + L +H+ + LS LR + + +I+P +++T+L+LSGI L Sbjct: 1 MYLLLKHLHMTFVVLSFITFLLRGIWMLRGSRLLERKLVKILPHIINTILILSGIVLAVY 60 Query: 63 AHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLA 122 ++ P G WL K+ G+++YI LG A S R+ + ALVV I +A Sbjct: 61 LNMSP--GSQPWLLAKIIGLVVYITLGVFAFKVA---SPTLRLGLWLAALVVFVQITSMA 115 Query: 123 TTKVPL 128 K PL Sbjct: 116 VHKNPL 121 >UniRef50_D0KXB0 Invasion gene expression up-regulator SirB n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KXB0_HALNC Length = 140 Score = 88.7 bits (219), Expect = 5e-17, Method: Composition-based stats. Identities = 38/127 (29%), Positives = 63/127 (49%), Gaps = 3/127 (2%) Query: 1 MTSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALM 60 MT + +H +++ LS+ LR + P+ ARW +I P +VDT+LL+S + + Sbjct: 1 MTIAQISVHIHGLAVVLSLIGFILRGIWMLKDSPRLKARWVKITPHIVDTVLLVSAL-IA 59 Query: 61 AKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIK 120 + + ++T + G+I+YIVLG AL R ++ R A+ LA+ V I Sbjct: 60 SYLMFWRYGVNPDYVTVMIVGLIVYIVLGLFAL--RLGKTKAIRASAWVLAIAVFLYISA 117 Query: 121 LATTKVP 127 T K Sbjct: 118 AGTLKTA 124 >UniRef50_B4RSV2 Invasion gene expression up-regulator, SirB n=2 Tax=Alteromonas macleodii RepID=B4RSV2_ALTMD Length = 114 Score = 87.2 bits (215), Expect = 1e-16, Method: Composition-based stats. Identities = 38/118 (32%), Positives = 55/118 (46%), Gaps = 4/118 (3%) Query: 12 LISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKAHILPFSGQ 71 + ++ LS+ RF +W +I+P ++DT+LL S I L P Sbjct: 1 MTAVGLSILFFIFRFIWSQFDATALSKKWVKILPHIIDTVLLASAIWLCFILSQYPIVN- 59 Query: 72 AQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLATTKVPLL 129 WLT K+ GV++YIV G AL + + A+ F AL VL +A TK PL Sbjct: 60 -PWLTFKVIGVVLYIVFGLFALK--KAKTALAKWGFFVAALAVLMATAMVAVTKQPLF 114 >UniRef50_A1WZQ3 Invasion gene expression up-regulator, SirB n=1 Tax=Halorhodospira halophila SL1 RepID=A1WZQ3_HALHL Length = 128 Score = 86.4 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 4/124 (3%) Query: 6 TLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKAHI 65 LLS H+++ S+GL R L ++ + R+ P V DT+LLL+ + LM Sbjct: 4 VLLSTHVLAAVASLGLFIARGILMFRGSAALDHKVLRVAPRVADTVLLLTAVVLMVMIAQ 63 Query: 66 LPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLATTK 125 PF WLT KL G+I YI LG +AL R + R+ AF +VV+ + + T+ Sbjct: 64 YPFVD--GWLTVKLLGLIAYIALGVVAL--GRSRPRPIRMAAFVGGIVVIGYLYLYSVTR 119 Query: 126 VPLL 129 PLL Sbjct: 120 EPLL 123 >UniRef50_UPI0000E0E158 invasion gene expression up-regulator, SirB n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E0E158 Length = 123 Score = 86.1 bits (212), Expect = 3e-16, Method: Composition-based stats. Identities = 38/127 (29%), Positives = 69/127 (54%), Gaps = 4/127 (3%) Query: 3 SFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAK 62 + L +HL ++ALS+ LTL+ A+W +++P ++ T+L+++ I+L Sbjct: 1 MYEGLKHLHLTAVALSLLFLTLQVIAHIFDTKMKDAKWLKVLPHIIHTVLIVTAISLCVI 60 Query: 63 AHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLA 122 PF W+T KL G++ YI+L +A+ + R + R+ AF A+ L + K+A Sbjct: 61 LAQYPFVH--DWVTSKLIGLVAYILLAVLAVKWAR--TNAMRVFAFLGAVAWLGLTAKVA 116 Query: 123 TTKVPLL 129 +K+PL Sbjct: 117 FSKMPLF 123 >UniRef50_B9YZ33 Invasion gene expression up-regulator SirB n=2 Tax=Chromobacterium group RepID=B9YZ33_9NEIS Length = 126 Score = 86.1 bits (212), Expect = 3e-16, Method: Composition-based stats. Identities = 47/126 (37%), Positives = 67/126 (53%), Gaps = 4/126 (3%) Query: 1 MTSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALM 60 M +++ + H+ LS+ L T+R L P A+ RI+P VVDTLLL GI L Sbjct: 1 MPTYTFIKHAHMGCAYLSILLFTVRGGLMLADSPLLRAKPLRILPHVVDTLLLTLGITLA 60 Query: 61 AKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIK 120 AH LP Q WL K+ +++YI LG +AL R ++ R AF AL + I+ Sbjct: 61 VLAHFLP--TQQDWLMAKIVLLLVYIGLGTVALK--RGRTKAIRTTAFAAALATVLWIVL 116 Query: 121 LATTKV 126 +A TK+ Sbjct: 117 IAKTKM 122 >UniRef50_Q21KQ5 Invasion gene expression up-regulator, SirB n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21KQ5_SACD2 Length = 120 Score = 84.5 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 40/124 (32%), Positives = 57/124 (45%), Gaps = 5/124 (4%) Query: 3 SFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAK 62 F+ + +H+ + LS+G +RF + R +I P V+DTLLL++G+ L Sbjct: 1 MFAVIKHIHVWLVLLSIGGFAVRFLWLMGNSSKLQLRAVKIAPHVIDTLLLVTGVTLAVM 60 Query: 63 AHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLA 122 PF W + KL VI YI LG A + R I AL+ II LA Sbjct: 61 LRYSPF--DYSWFSIKLLLVITYIGLGITAFKIPH---KHLRAIFGISALLTACAIIILA 115 Query: 123 TTKV 126 T+K Sbjct: 116 TSKP 119 >UniRef50_C4GIH0 Putative uncharacterized protein n=1 Tax=Kingella oralis ATCC 51147 RepID=C4GIH0_9NEIS Length = 125 Score = 83.4 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 33/125 (26%), Positives = 61/125 (48%), Gaps = 3/125 (2%) Query: 2 TSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMA 61 + + + H+ +A+++ L LRFWLR + + R++P + D++LL +G+ +M Sbjct: 3 SLYLPIKHTHMFFVAITIILFNLRFWLRTMQPEKPLPVILRVLPHINDSMLLFTGMLMMQ 62 Query: 62 KAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKL 121 PF G ++WL KL V+ YI +G L + + ++++ II L Sbjct: 63 IVPWQPF-GASKWLGVKLLLVLTYIFVGAFCLRATPRSGKWF--GLYGAGMLIVLTIIYL 119 Query: 122 ATTKV 126 A K Sbjct: 120 AHWKP 124 >UniRef50_C5BLU0 Protein SirB n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BLU0_TERTT Length = 123 Score = 83.0 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 4/126 (3%) Query: 1 MTSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALM 60 M +H+ L+ +LRF + RW +I+P + DT LL+SG+ L Sbjct: 1 MPYILVAKHLHVWFALLTFVGFSLRFLWLIGRSDLLHKRWVKILPHINDTGLLISGVTLA 60 Query: 61 AKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIK 120 PF+ W KL + +YIVLG + R ++ +I F ++ + + II Sbjct: 61 IFFGYSPFAVF--WFGVKLALIALYIVLGVLLF--RTHQNRLYQITLFSMSFITYFFIII 116 Query: 121 LATTKV 126 + TK Sbjct: 117 VVLTKP 122 >UniRef50_Q5QV01 Uncharacterized conserved membrane protein n=2 Tax=Idiomarina RepID=Q5QV01_IDILO Length = 124 Score = 82.6 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 5/128 (3%) Query: 3 SFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAK 62 ++ +H++ + +S+ L RF L P +W +IVP V DTLLLLS + +M Sbjct: 1 MYAAFKHLHVLFVLISISLFLFRFVLLLLDSPLLKKKWLKIVPHVNDTLLLLSAVGIMVT 60 Query: 63 AHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLA 122 + P Q WLT+K+ GVI YI G +A+ + AR + F A + ++ +A Sbjct: 61 LSMYPI--QVPWLTDKVIGVIAYIGFGVLAMK---GKTAGARWLGFIGACGWIAFLLHVA 115 Query: 123 TTKVPLLG 130 +K L+ Sbjct: 116 VSKQALIA 123 >UniRef50_Q3IK93 Putative uncharacterized protein n=2 Tax=Alteromonadales RepID=Q3IK93_PSEHT Length = 124 Score = 82.6 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 39/128 (30%), Positives = 59/128 (46%), Gaps = 5/128 (3%) Query: 2 TSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMA 61 + + H+ LSV L +R + R A + I +DTLLL+S + LM Sbjct: 1 MDYLAVKHSHMAIAMLSVILFYVRSFSRMGSGKLAKNKLVFIGSHGIDTLLLVSALMLMG 60 Query: 62 KAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKL 121 A I PF + WL EK+ V+IYI +G ++ + + A I L ++ + L Sbjct: 61 IAKINPF--EQYWLLEKIVLVVIYIAVGIVSSKQTKTAPKVAYTIFNTLVILAIGY---L 115 Query: 122 ATTKVPLL 129 AT K LL Sbjct: 116 ATAKSALL 123 >UniRef50_B2JWA9 Putative uncharacterized protein n=1 Tax=Burkholderia phymatum STM815 RepID=B2JWA9_BURP8 Length = 126 Score = 81.0 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 31/122 (25%), Positives = 50/122 (40%), Gaps = 4/122 (3%) Query: 6 TLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKAHI 65 L H+ + S L R + R + V+DTLLL +G +L + Sbjct: 1 MLKFAHVTLVTASGMLFAARSIASLNDYAWPMRDAWRRLSYVIDTLLLAAGASLWLLLRL 60 Query: 66 LPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLATTK 125 P WL KL V+ Y++ G +A+ R R+ + AL++ +I +A T Sbjct: 61 NPIRD--AWLGTKLLLVVAYVIAGTLAMK--RGRPWGTRVASLGCALLLFALIASVAATH 116 Query: 126 VP 127 P Sbjct: 117 NP 118 >UniRef50_C0DTE2 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DTE2_EIKCO Length = 123 Score = 81.0 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 40/124 (32%), Positives = 62/124 (50%), Gaps = 3/124 (2%) Query: 3 SFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAK 62 + + HL+ + ++V L LRFW+R + R VP + DTLLL +G+ LM Sbjct: 1 MYLIVKHSHLVFVVITVVLFNLRFWMRTILPSSPVPKVLRFVPHINDTLLLFTGMMLMTI 60 Query: 63 AHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLA 122 +PF G A WL KL V++Y+++G L ++ I + L++ L I LA Sbjct: 61 TRYVPF-GNADWLGVKLILVVLYVLVGMFCLKSPPRSAKW--WIGYALSIGCLCTIYWLA 117 Query: 123 TTKV 126 T K Sbjct: 118 TYKP 121 >UniRef50_A2SGG2 Putative uncharacterized protein n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SGG2_METPP Length = 140 Score = 79.5 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 40/128 (31%), Positives = 57/128 (44%), Gaps = 4/128 (3%) Query: 1 MTSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALM 60 ++ + L S H+ SVGL T R + R ++D+LLL +G AL Sbjct: 4 LSQYPALKSAHMALAGASVGLFTARGLGVQWRAAWPLRAGVRRASVLIDSLLLAAGGALW 63 Query: 61 AKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIK 120 A + A WL KL ++ YIVLG AL R + + R +AF AL + I+ Sbjct: 64 AMLGLS--LAHAPWLLVKLALIVAYIVLGSFALK--RARTPRGRGLAFAGALACVLAIVA 119 Query: 121 LATTKVPL 128 A T L Sbjct: 120 TALTHDVL 127 >UniRef50_A1U5E9 Invasion gene expression up-regulator, SirB n=2 Tax=Marinobacter RepID=A1U5E9_MARAV Length = 123 Score = 79.5 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 42/126 (33%), Positives = 60/126 (47%), Gaps = 4/126 (3%) Query: 1 MTSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALM 60 MTS+ L +H+ + L++ L LR L P R +P + DT+LL++ IAL+ Sbjct: 1 MTSYIILKHLHMTTAYLTITLFALRLLLDAVGRPGWRQTPLRFIPHINDTILLVAAIALV 60 Query: 61 AKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIK 120 A S WL K+ + YI+ G AL + ARI+A LALV + I Sbjct: 61 FVAGYA--SAMPGWLITKIVLLFGYIIAGVFALKTTVG--KPARIVAAVLALVQVSAIFH 116 Query: 121 LATTKV 126 LA K Sbjct: 117 LAMAKP 122 >UniRef50_A1SV91 Putative uncharacterized protein n=2 Tax=Psychromonas RepID=A1SV91_PSYIN Length = 128 Score = 79.5 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 4/128 (3%) Query: 3 SFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTR-IVPPVVDTLLLLSGIALMA 61 +S L HL I +++ L L F+ H A + I+ T+ L+ G+ LM Sbjct: 1 MYSFLKHTHLTLILIAIVLFILCFYWIVTGHKNAQKVIFKKILLHTHLTIALI-GLGLMG 59 Query: 62 KAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKL 121 I PF Q WL EK+ I Y++L +AL+ + + R +AF + I +L Sbjct: 60 VLQINPFESQNYWLIEKIGAFIGYLILVSVALNEKTR--KGMRFLAFVGVFGWIVYIGQL 117 Query: 122 ATTKVPLL 129 +K ++ Sbjct: 118 VFSKQAMI 125 >UniRef50_B4S0W7 Invasion gene expression up-regulator, SirB n=1 Tax=Alteromonas macleodii 'Deep ecotype' RepID=B4S0W7_ALTMD Length = 112 Score = 79.1 bits (194), Expect = 4e-14, Method: Composition-based stats. Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 4/112 (3%) Query: 14 SIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKAHILPFSGQAQ 73 ++ +R + ++W + +P V+DTLLL S +ALM P+ Sbjct: 2 LAVTTLINFVIRGYWMIIDSSLLHSKWVKTIPHVIDTLLLSSAVALMIMTGFYPWI--LD 59 Query: 74 WLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLATTK 125 W+ K+ +++YIVLG IAL R ++ RI AF AL+ + +I K A +K Sbjct: 60 WVAAKILLLLLYIVLGTIALK--RGKTKAQRIAAFIAALICIGLIFKSALSK 109 >UniRef50_Q7MFW3 Uncharacterized protein conserved in bacteria n=2 Tax=Vibrio vulnificus RepID=Q7MFW3_VIBVY Length = 127 Score = 79.1 bits (194), Expect = 4e-14, Method: Composition-based stats. Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 4/129 (3%) Query: 1 MTSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALM 60 M + LL H+ I LS LR + ++ W V V+ ++L+S IAL Sbjct: 1 MMMYLLLLKAHIGLIVLSFLSFALRAYWGFKASTWLMKEWPLKVHKVITLVMLISAIALC 60 Query: 61 AKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIK 120 PF+ WLTEKL + Y+ +A + ++Q R + + ++ +I Sbjct: 61 LTISQYPFADT--WLTEKLLLLAAYVGFAMLAFKPQL--NRQLRTVFTSVTCILFVMIFY 116 Query: 121 LATTKVPLL 129 +A T VP+L Sbjct: 117 IAKTHVPIL 125 >UniRef50_Q9CMI4 Putative uncharacterized protein n=1 Tax=Pasteurella multocida RepID=Q9CMI4_PASMU Length = 122 Score = 78.0 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 30/128 (23%), Positives = 50/128 (39%), Gaps = 9/128 (7%) Query: 1 MTSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALM 60 M + +H+ LS+ L +R ++ + +I+P + DTLL SGI L Sbjct: 1 MAYYLI--YLHIACAFLSLSLFIIRGMMQLTGKNWRDRKVLKILPHLSDTLLFCSGIGLF 58 Query: 61 AKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRR---MHSQQARIIAFPLALVVLYI 117 W K+ + +YIV+ I +R SQ+ F AL+ Sbjct: 59 LLFQQS----VTTWFIYKMLFIALYIVVATIFFSRKRLTSPFSQKKNRFYFITALIFFLS 114 Query: 118 IIKLATTK 125 + +A K Sbjct: 115 TMVIAYLK 122 >UniRef50_A4BQT9 Putative uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BQT9_9GAMM Length = 96 Score = 75.7 bits (185), Expect = 5e-13, Method: Composition-based stats. Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 3/99 (3%) Query: 29 RYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKAHILPFSGQAQWLTEKLFGVIIYIVL 88 P RW R++P +D ++L SG+ L + P + W+ KL G++ Y+VL Sbjct: 1 MLYDSPLLSRRWVRVLPHAIDAVVLASGLYLAVAFYEFPLTYH-PWIIAKLTGLLAYVVL 59 Query: 89 GFIALDYRRMHSQQARIIAFPLALVVLYIIIKLATTKVP 127 G IAL RR +++ R+ AF +L++ I+ +A TK+P Sbjct: 60 GAIAL--RRGRTKRVRVAAFVGSLLLFGYIVFVAVTKMP 96 >UniRef50_Q0ACI6 Invasion gene expression up-regulator, SirB n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0ACI6_ALHEH Length = 131 Score = 74.9 bits (183), Expect = 7e-13, Method: Composition-based stats. Identities = 44/127 (34%), Positives = 67/127 (52%), Gaps = 4/127 (3%) Query: 2 TSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMA 61 + L H++ +S+ L LR L K + RIVP + DT+LLL+ + L+A Sbjct: 5 ELYFPLKHTHMLMAIISIALFVLRGLLLPIKPELLANKAVRIVPHIFDTVLLLTALGLLA 64 Query: 62 KAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKL 121 + PF+ W+ K+ G+I+YIVLG IAL RR + A+ +AF A+ I + Sbjct: 65 VLSLNPFAH--GWIMAKIIGLILYIVLGTIAL--RRGRTPVAKAVAFFAAVFTFAYIYAV 120 Query: 122 ATTKVPL 128 A T+ PL Sbjct: 121 ALTRTPL 127 >UniRef50_B0BP11 Putative uncharacterized protein n=6 Tax=Pasteurellaceae RepID=B0BP11_ACTPJ Length = 123 Score = 73.3 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 40/127 (31%), Positives = 60/127 (47%), Gaps = 6/127 (4%) Query: 1 MTSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALM 60 M F L+ H+ +S+ LL R L + + RI P +VDTLLL+SGIAL+ Sbjct: 1 MEFFPQLVLGHVGFAYISLILLLTRGVLASKMVDWRQYKVLRIAPHIVDTLLLVSGIALL 60 Query: 61 AKAHILPF--SGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYII 118 A + QWL K+ +++YIV A SQ + F LA+V + Sbjct: 61 AILLSNGIYALNEMQWLIPKIAFLVLYIVFSVKAFK----KSQLFSLKNFILAVVSFMLA 116 Query: 119 IKLATTK 125 + +AT + Sbjct: 117 MLVATLR 123 >UniRef50_A6F6L3 Uncharacterized protein conserved in bacteria n=1 Tax=Moritella sp. PE36 RepID=A6F6L3_9GAMM Length = 153 Score = 71.4 bits (174), Expect = 9e-12, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 43/105 (40%), Gaps = 4/105 (3%) Query: 25 RFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKAHILPFSGQAQWLTEKLFGVII 84 R + + + V++ +L+LSG AL + PF W+TEK + + Sbjct: 52 RTFWAIKGSEYINNVILFKIHKVLNLVLILSGFALCVTINQYPFVD--AWVTEKFVLLFV 109 Query: 85 YIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLATTKVPLL 129 Y+ +A + + + R + +V I +A TKV L Sbjct: 110 YVGFAMLAFKPQM--NLKVRQFCIAVTMVFFVTIFYIAKTKVALF 152 >UniRef50_Q0F0D8 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F0D8_9PROT Length = 124 Score = 70.3 bits (171), Expect = 2e-11, Method: Composition-based stats. Identities = 42/125 (33%), Positives = 64/125 (51%), Gaps = 4/125 (3%) Query: 3 SFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAK 62 + LL +H+ + LS+ L T R +Q P R VP VDT+LL SGI L Sbjct: 1 MITWLLPLHISLVGLSLVLFTWRGVRTWQGRPINGRLLHRYVPDTVDTMLLASGIFLAWS 60 Query: 63 AHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLA 122 ++P+ A WL KL +++YI+LGF+ YR + +F +AL+ + I+ +A Sbjct: 61 LQVMPW--HAAWLAAKLIAILLYILLGFVVFRYR--GAIWINRASFVIALIAVVYIVAVA 116 Query: 123 TTKVP 127 T P Sbjct: 117 HTMQP 121 >UniRef50_A7HRU5 Conserved hypothetical membrane protein n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HRU5_PARL1 Length = 136 Score = 67.9 bits (165), Expect = 9e-11, Method: Composition-based stats. Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 9/132 (6%) Query: 1 MTSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARW-----TRIVPPVVDTLLLLS 55 + ++ + VH+ S+ S L +R + R R++ +DT+LL + Sbjct: 2 IEFYAEIRLVHIWSVIASGSLFAMRGLALFAGAGGTGERLAMAAPVRLLSYTIDTVLLTA 61 Query: 56 GIALMAKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVL 115 + LM PF WLT K+ +++YI LG +A + ++ RI AF AL V Sbjct: 62 ALMLMTIVQQYPFIDH--WLTVKVVLLVVYIALGMMAFRF--GRTRGQRIGAFAAALAVF 117 Query: 116 YIIIKLATTKVP 127 I+ +A P Sbjct: 118 LYIVSVALAHDP 129 >UniRef50_P44139 Uncharacterized protein HI1253 n=20 Tax=Pasteurellaceae RepID=Y1253_HAEIN Length = 127 Score = 67.6 bits (164), Expect = 1e-10, Method: Composition-based stats. Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 7/121 (5%) Query: 5 STLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKAH 64 L+ +H+ LS+ LL +R ++ + +I+P + DTLL++SG+ ++ Sbjct: 14 IMLVHLHIFFAFLSLALLVIRGAMQLNGKNWRSIKLLKILPHLSDTLLIVSGVVILYLFA 73 Query: 65 ILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLATT 124 G WL K +I+YIV + + F LA V + +A Sbjct: 74 F----GIEWWLVAKFALLILYIVFAAKFFSKKVSQPKSI---FFWLACVSFIGAMLIAYL 126 Query: 125 K 125 K Sbjct: 127 K 127 >UniRef50_A4C9H2 Tryptophanyl-tRNA synthetase n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C9H2_9GAMM Length = 119 Score = 67.2 bits (163), Expect = 1e-10, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 43/97 (44%), Gaps = 3/97 (3%) Query: 30 YQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKAHILPFSGQAQWLTEKLFGVIIYIVLG 89 + + + +I P ++ TL + + I L+A + + W T KL G + Y++ Sbjct: 1 MKGSDKVNNKLLKIGPHILYTLFVCTFIYLVAVNPLNLYPFTNGWATSKLAGFVFYVLSI 60 Query: 90 FIALDYRRMHSQQARIIAFPLALVVLYIIIKLATTKV 126 +AL ++ RI+ F A+ L + +LA Sbjct: 61 TLALKSKKT---LWRIVGFISAIFWLAMTGRLAFAHH 94 >UniRef50_C5S2A3 Putative uncharacterized protein n=2 Tax=Actinobacillus minor RepID=C5S2A3_9PAST Length = 124 Score = 67.2 bits (163), Expect = 2e-10, Method: Composition-based stats. Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 6/127 (4%) Query: 1 MTSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALM 60 + L+ H LS+ LL R L + + I P +VDTLLLLSG ++ Sbjct: 2 LEILPKLIHSHAGFAYLSLILLLTRGALSAKGVNWRKVKVLLIAPHLVDTLLLLSGAIVV 61 Query: 61 AKAHILPF--SGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYII 118 + + WL K +++YIV A +Q + + LA+V + Sbjct: 62 SVYLSNGIYTLSELSWLLGKFLFIVLYIVFSAKAFK----KTQPFSLKFYLLAVVSFMMA 117 Query: 119 IKLATTK 125 + +A Sbjct: 118 MMIAVMH 124 >UniRef50_A7JTS0 Putative uncharacterized protein n=2 Tax=Mannheimia haemolytica RepID=A7JTS0_PASHA Length = 123 Score = 66.0 bits (160), Expect = 4e-10, Method: Composition-based stats. Identities = 38/127 (29%), Positives = 57/127 (44%), Gaps = 6/127 (4%) Query: 1 MTSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALM 60 M ST+L H+ +S+ LL R +L + + RI P VDT LL++GIA + Sbjct: 1 MEYLSTILKAHIGLAYISLILLLTRGFLSSKMVDWRQYKILRIAPHAVDTFLLITGIAAV 60 Query: 61 AKAHILPF--SGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYII 118 A F Q WL KL +++YIV A Q + + LA+V ++ Sbjct: 61 AIFLAYDFFTLAQFSWLLPKLLFLVLYIVFATKAFK----KGQPFSLKFYLLAVVSFLLM 116 Query: 119 IKLATTK 125 + AT Sbjct: 117 MLTATFH 123 >UniRef50_Q65SI4 Putative uncharacterized protein n=1 Tax=Mannheimia succiniciproducens MBEL55E RepID=Q65SI4_MANSM Length = 116 Score = 64.9 bits (157), Expect = 8e-10, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 4/116 (3%) Query: 5 STLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKAH 64 +TLL H+ LS+ LL +R +++ Q + +I P + DTLL+LSG+AL+ Sbjct: 3 TTLLQTHITFAFLSLMLLIVRGYMQLQGKDWRTVKLLKITPHLADTLLVLSGVALVFVFG 62 Query: 65 ILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIK 120 G WL K+ +++Y + S +I A + + Sbjct: 63 Y----GLQMWLIGKVLLLVLYAFFSAKFFQKNAVKSNILFLILALSAFLAAMYLGY 114 >UniRef50_Q2BGW5 Invasion gene expression up-regulator, SirB n=1 Tax=Neptuniibacter caesariensis RepID=Q2BGW5_9GAMM Length = 124 Score = 61.0 bits (147), Expect = 1e-08, Method: Composition-based stats. Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 2/122 (1%) Query: 3 SFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAK 62 LL VH+ ++ LS+ + R L + A + ++ L++L+ L Sbjct: 1 MHPILLKVHMAAVVLSLLVFLGRAVLTFAGSELARKKAVLMLAMATMVLVVLTAAGLAVS 60 Query: 63 AHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLA 122 PF WLTEK FG+++YIVL +L ++ +I LA L + + + Sbjct: 61 LGQFPFVD--GWLTEKFFGLLVYIVLAIASLKPGVATLKRIPMIILSLAGFALAMSVAVT 118 Query: 123 TT 124 T Sbjct: 119 RT 120 >UniRef50_A6V035 Invasion gene expression up-regulator, SirB n=3 Tax=Pseudomonas aeruginosa RepID=A6V035_PSEA7 Length = 118 Score = 59.5 bits (143), Expect = 3e-08, Method: Composition-based stats. Identities = 30/118 (25%), Positives = 45/118 (38%), Gaps = 5/118 (4%) Query: 3 SFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAK 62 + L ++H+ S L R + + R R P +VDTLLLLS + L+ Sbjct: 1 MYLWLKTLHITFALSSAALFAWRLAWNWSGRKNSGIR--RWGPHLVDTLLLLSALGLVHL 58 Query: 63 AHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIK 120 A P WL KL ++ YIV AL R + L ++ + Sbjct: 59 AMPWPL---PLWLQAKLGLLLGYIVCAAFALRMARGIGKGLLSALSLALLGGIFYLAL 113 >UniRef50_Q12MT8 Putative uncharacterized protein n=1 Tax=Shewanella denitrificans OS217 RepID=Q12MT8_SHEDO Length = 124 Score = 51.8 bits (123), Expect = 8e-06, Method: Composition-based stats. Identities = 35/127 (27%), Positives = 54/127 (42%), Gaps = 4/127 (3%) Query: 3 SFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAK 62 ++ LL HLI + LS+ LR Y +V LLLLS + L Sbjct: 1 MYAMLLKTHLILVGLSMFSFILRSSWAYYYPHLLANEIALKSHKIVTLLLLLSALLLCIS 60 Query: 63 AHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLA 122 PF WLTEKL +++Y+ +A + R + R + A V L +++ +A Sbjct: 61 LGQYPFVD--AWLTEKLVLLVLYVAAALMAFNSRLA--PKVRGLVIMTACVSLVLMVIIA 116 Query: 123 TTKVPLL 129 T L+ Sbjct: 117 KTHSSLV 123 >UniRef50_Q1Q912 Putative uncharacterized protein n=3 Tax=Psychrobacter RepID=Q1Q912_PSYCK Length = 119 Score = 48.3 bits (114), Expect = 7e-05, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 48/120 (40%), Gaps = 5/120 (4%) Query: 7 LLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKAHIL 66 + +H++ L + L + +L + R +I ++ +++LSG+ ++ + Sbjct: 1 MKHLHMLMAVLLIVLFLYQSYLVL-SANKQAPRVVKISSHILYAVMILSGVGMLMQLMSA 59 Query: 67 PFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLATTKV 126 + QW+ K+ ++ I A + + R +A I+ LA TK Sbjct: 60 --NAPVQWVFAKIILLVAAISASIKAFNN--TATPSQRKTGILIAGAAYVGIVILAFTKP 115 >UniRef50_UPI0001699E53 hypothetical protein Epers_14047 n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001699E53 Length = 63 Score = 40.2 bits (93), Expect = 0.019, Method: Composition-based stats. Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 2/53 (3%) Query: 76 TEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLATTKVPL 128 T KL + YIV+G IAL R S+ RI A P+A+ II + T+ PL Sbjct: 1 TAKLLALFAYIVIGSIALK--RGPSRTIRIFAGPIAIACYLYIIAVGLTRQPL 51 >UniRef50_B0V6Q2 Putative uncharacterized protein n=17 Tax=Acinetobacter RepID=B0V6Q2_ACIBY Length = 130 Score = 40.2 bits (93), Expect = 0.020, Method: Composition-based stats. Identities = 17/131 (12%), Positives = 42/131 (32%), Gaps = 9/131 (6%) Query: 1 MTSFSTLLSVHLISIALSVGLLTLRFWLRYQK-----HPQAFARWTRIVPPVVDTLLLLS 55 M + +H+ ++A ++ + LR + A + + + T++ ++ Sbjct: 1 MEAHLLTKIIHMTAVAAALMVFVLRASTLFIGVQGEQPNPAGRKALVALQHLSFTVVFIT 60 Query: 56 GIALMAKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVL 115 G L+ + W K+ ++ + A R ++ + Sbjct: 61 GAILLVMKNF----QVQPWFYAKIILFLVLLSSLMKAFKKDDTILLAQRRAGLVISAITF 116 Query: 116 YIIIKLATTKV 126 II L K Sbjct: 117 VAIIILVIVKP 127 >UniRef50_B5JTU7 Putative uncharacterized protein n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JTU7_9GAMM Length = 124 Score = 39.8 bits (92), Expect = 0.025, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 46/125 (36%), Gaps = 4/125 (3%) Query: 3 SFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAK 62 + + VH + +L + R L P + + +D L G+AL + Sbjct: 1 MYEPIKIVHALFGSLVGLAIVSRLLLLATDAPLLNRKPLVLTFMGIDVATFLLGVALALQ 60 Query: 63 AHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLA 122 + WL K+ + + G + + + RI+ + L++ I+ LA Sbjct: 61 LPE--LANANGWLHAKVVAWLA--LFGSVFYGIKVAQVKSRRILWVSIGLMIYLYIMALA 116 Query: 123 TTKVP 127 +K P Sbjct: 117 HSKQP 121 >UniRef50_A6F6J6 Putative uncharacterized protein n=1 Tax=Moritella sp. PE36 RepID=A6F6J6_9GAMM Length = 124 Score = 39.8 bits (92), Expect = 0.030, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 50/124 (40%), Gaps = 4/124 (3%) Query: 6 TLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKAHI 65 ++ +H+ ++ LSV + + F ++ P V+D + ++ + + Sbjct: 3 IVIPLHIATLLLSVLMYFVNFAFSVKQSPYLEHAGFIKSRKVIDMITVMMIALVCMVSGQ 62 Query: 66 LPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLATTK 125 +PF TEKL + + + + ++ + R +AF ++ L+ + LA Sbjct: 63 VPFVDTVM--TEKLVSTLA--ITFMVFMSLQQGKNLFFRCVAFAGSIGWLFYVFSLAVYG 118 Query: 126 VPLL 129 L Sbjct: 119 EAYL 122 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.323 0.156 0.498 Lambda K H 0.267 0.0475 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 910,206,859 Number of Sequences: 3077464 Number of extensions: 38499487 Number of successful extensions: 273324 Number of sequences better than 1.0e-01: 162 Number of HSP's better than 0.1 without gapping: 134 Number of HSP's successfully gapped in prelim test: 197 Number of HSP's that attempted gapping in prelim test: 272799 Number of HSP's gapped (non-prelim): 378 length of query: 130 length of database: 1,040,396,356 effective HSP length: 95 effective length of query: 35 effective length of database: 748,037,276 effective search space: 26181304660 effective search space used: 26181304660 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 39 (20.8 bits) S2: 88 (38.3 bits)