116 c1vciA_ Probab=97.20   E-value=0.00016  Score=47.61  Aligned_columns=164  Identities=12%

Q ss_pred             CHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCC----HHHHH
Q ss_conf             91687775088778707999576644267999999999998569948999888998999999999862999----77963
Q batch____       210 GYDDLNKKTAGLQPSDLIIVAARPSMGKTTFAMNLVENAAMLQDKPVLIFSLEMPSEQIMMRSLASLSRVD----QTKIR  285 (471)
Q Consensus       210 g~~~LD~~~gG~~~G~l~vi~g~pg~GKT~l~l~ia~~~a~~~~~~vl~~slEm~~~~~~~Rl~a~~~~v~----~~~i~  285 (471)
                      +.+.|+.+.--+.+|+++.|.|++|+|||+++.-++ .........+.+..-+.+......|.++......    .....
T Consensus        18 ~~~~L~~isl~i~~Ge~~~l~G~nGsGKsTll~~l~-g~~~p~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~n~~~~   96 (353)
T c1vciA_          18 NFTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIA-GLEEPTEGRIYFGDRDVTYLPPKDRNISMVFQHMTVYENIAFP   96 (353)
T ss_dssp             TEEEEEEEEEEECTTCEEEEECCTTSSHHHHHHHHH-TSSCCSEEEEEETTEECTTSCGGGTTEEEECCCCCHHHHHHTT
T ss_pred             CEEEEECCEEEECCCCEEEEECCCCCCHHHHHHHHH-CCCCCCCCEEEECCEECCCCCHHHCEEECCCCCCEEEECCCCC
T ss_conf             889863232468899789998799988889999996-6874760079988888745783230220233320000012112


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCC--HHHHHHHHHHHHHHCCCCCEEEEECHHHCCCCCCCCCHHHHHHH
Q ss_conf             3799989999999999998511896997089889--89999999999961179988999166651267888898999999
Q batch____       286 TGQLDDEDWARISGTMGILLEKRNIYIDDSSGLT--PTEVRSRARRIAREHGGIGLIMIDYLQLMRVPALSDNRTLEIAE  363 (471)
Q Consensus       286 ~~~~~~~~~~~~~~a~~~~~~~~~l~i~d~~~~t--~~~i~~~ir~~~~~~~~~~lvvID~L~~i~~~~~~~~~~~~~~~  363 (471)
                      .......+.............-..+.-.....+|  --+..+.+|.+..   +++++++|       .-...=.......
T Consensus        97 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~LSgGq~qrv~iaral~~---~p~llllD-------EP~s~LD~~~~~~  166 (353)
T c1vciA_          97 LKKFPKDEIDKRVRWAAELLQIEELLNRYPAQLSGGQRQRVAVARAIVV---EPDVLLMD-------EPLSNLDAKLRVA  166 (353)
T ss_dssp             CCCCCHHHHHHHHHHHHHHTTCGGGTTCCGGGCCSSCHHHHHHHHHHTT---CCSEEEEE-------STTTTSCHHHHHH
T ss_pred             CHHHHHHHCCHHHHHHHHHCCCCEEECCCCEECCCCHHHHHHHHHHHCC---CCEEEEEE-------CCCCCCCHHHHHH
T ss_conf             1000011000025787631385101102520357661576888898507---86599995-------6101988899999


Q ss_pred             HHHHHHHHHHHHCCEEEEEEC
Q ss_conf             999999999981894999950
Q batch____       364 ISRSLKALAKELNVPVVALSQ  384 (471)
Q Consensus       364 i~~~Lk~lA~~~~i~ii~lsq  384 (471)
                      +...|+.+.++.+++|++++|
T Consensus       167 ~~~~l~~~~~~~g~tvi~vtH  187 (353)
T c1vciA_         167 MRAEIKKLQQKLKVTTIYVTH  187 (353)
T ss_dssp             HHHHHHHHHHHHCCEEEEEES
T ss_pred             HHHHHHHHHHHCCCEEEEEEE
T ss_conf             999999999973982467730