BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (158 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P52140 UPF0758 protein yfjY n=148 Tax=Enterobacteriacea... 244 8e-64 UniRef50_B1IPT7 DNA repair protein RadC n=3 Tax=Enterobacteriace... 196 2e-49 UniRef50_C8U0Q3 Predicted DNA repair protein n=21 Tax=Enterobact... 184 1e-45 UniRef50_Q8VR59 Putative intergenic-region protein n=24 Tax=Esch... 180 1e-44 UniRef50_B3HA66 DNA repair protein RadC n=3 Tax=Enterobacteriace... 176 2e-43 UniRef50_C6DAT0 DNA repair protein RadC n=5 Tax=Enterobacteriace... 154 8e-37 UniRef50_Q6TFX1 ORF25 n=3 Tax=Enterobacteriaceae RepID=Q6TFX1_ERWAM 152 2e-36 UniRef50_A6SWN0 DNA repair protein RadC n=14 Tax=Proteobacteria ... 150 8e-36 UniRef50_B4Y2Y7 RadC n=1 Tax=Aquabacterium sp. PL1F5 RepID=B4Y2Y... 146 2e-34 UniRef50_A7FEQ9 DNA repair protein, RadC family n=4 Tax=Yersinia... 144 8e-34 UniRef50_C9Y8Q3 DNA repair protein radC homolog n=1 Tax=Curvibac... 143 2e-33 UniRef50_C4SWK5 DNA repair protein n=1 Tax=Yersinia intermedia A... 143 2e-33 UniRef50_A9AE97 DNA repair protein n=8 Tax=Bacteria RepID=A9AE97... 140 1e-32 UniRef50_Q0AJV4 DNA repair protein RadC n=18 Tax=Proteobacteria ... 140 1e-32 UniRef50_A1TJG0 DNA repair protein RadC n=1 Tax=Acidovorax citru... 140 1e-32 UniRef50_D2NHT0 Putative phage DNA repair protein n=1 Tax=Escher... 140 2e-32 UniRef50_Q46XP0 UPF0758 protein Reut_A2732 n=12 Tax=Proteobacter... 139 3e-32 UniRef50_Q7VMM9 Conserved possible DNA repair protein n=1 Tax=Ha... 139 4e-32 UniRef50_Q9KUK8 UPF0758 protein VC_0510 n=11 Tax=Gammaproteobact... 137 1e-31 UniRef50_A7MQ95 UPF0758 protein ESA_04094 n=32 Tax=Bacteria RepI... 137 1e-31 UniRef50_C5V0A3 DNA repair protein RadC n=1 Tax=Gallionella ferr... 137 1e-31 UniRef50_Q47ZW8 DNA repair protein, RadC family protein n=20 Tax... 135 3e-31 UniRef50_B0UUW7 UPF0758 protein HSM_0009 n=10 Tax=Pasteurellacea... 135 4e-31 UniRef50_Q5E054 DNA repair protein RadC n=3 Tax=Gammaproteobacte... 135 4e-31 UniRef50_Q9KR57 UPF0758 protein VC_1786 n=59 Tax=Proteobacteria ... 135 5e-31 UniRef50_Q21TE2 UPF0758 protein Rfer_3252 n=12 Tax=cellular orga... 134 1e-30 UniRef50_B5EXE3 UPF0758 protein yicR n=116 Tax=Enterobacteriacea... 133 1e-30 UniRef50_C5SDF8 DNA repair protein RadC n=1 Tax=Allochromatium v... 133 1e-30 UniRef50_Q0ACW7 DNA repair protein RadC n=2 Tax=Proteobacteria R... 131 6e-30 UniRef50_C4LDH2 DNA repair protein RadC n=2 Tax=Aeromonadaceae R... 131 6e-30 UniRef50_Q4UPP0 UPF0758 protein XC_3944 n=35 Tax=Proteobacteria ... 130 2e-29 UniRef50_Q2S8K4 DNA repair protein n=1 Tax=Hahella chejuensis KC... 129 3e-29 UniRef50_Q2SAN5 DNA repair protein n=2 Tax=Hahella chejuensis KC... 129 3e-29 UniRef50_A4W511 UPF0758 protein Ent638_0101 n=3 Tax=Enterobacter... 129 4e-29 UniRef50_Q3JDF2 DNA repair protein RadC n=4 Tax=Gammaproteobacte... 128 6e-29 UniRef50_B2UAP0 UPF0758 protein Rpic_2712 n=3 Tax=Burkholderiace... 127 1e-28 UniRef50_A5UDB6 UPF0758 protein CGSHiEE_07200 n=30 Tax=Gammaprot... 127 1e-28 UniRef50_B0T9F0 DNA repair protein RadC n=1 Tax=Caulobacter sp. ... 126 2e-28 UniRef50_D1AWS8 DNA repair protein RadC n=1 Tax=Streptobacillus ... 126 3e-28 UniRef50_B0T9R6 DNA repair protein RadC n=4 Tax=Alphaproteobacte... 125 6e-28 UniRef50_B1HKP9 DNA repair protein n=1 Tax=Burkholderia pseudoma... 124 1e-27 UniRef50_B8KQ45 DNA repair protein RadC n=1 Tax=gamma proteobact... 123 2e-27 UniRef50_B0RXB0 DNA repair protein radC homolog n=3 Tax=Xanthomo... 123 2e-27 UniRef50_D1JB12 Probable DNA repair protein radC homolog n=2 Tax... 122 5e-27 UniRef50_B2FJW1 UPF0758 protein Smlt0399 n=129 Tax=Proteobacteri... 121 6e-27 UniRef50_A1SR15 UPF0758 protein Ping_0056 n=2 Tax=Gammaproteobac... 121 7e-27 UniRef50_C3WF45 Putative uncharacterized protein n=1 Tax=Fusobac... 120 1e-26 UniRef50_Q3BQ28 RadC family DNA repair protein n=5 Tax=Xanthomon... 120 1e-26 UniRef50_B7C9V0 Putative uncharacterized protein n=1 Tax=Eubacte... 119 3e-26 UniRef50_Q47CZ3 DNA repair protein RadC n=2 Tax=Dechloromonas ar... 118 5e-26 UniRef50_A4SUN7 DNA repair protein n=2 Tax=Aeromonas salmonicida... 118 7e-26 UniRef50_C7NDB9 DNA repair protein RadC n=4 Tax=Fusobacteriaceae... 117 9e-26 UniRef50_B4S9N8 DNA repair protein RadC n=1 Tax=Prosthecochloris... 117 1e-25 UniRef50_A1B4F1 UPF0758 protein Pden_2304 n=44 Tax=Alphaproteoba... 117 1e-25 UniRef50_B4X5D3 DNA repair protein RadC n=4 Tax=Alcanivorax sp. ... 117 1e-25 UniRef50_Q2J299 UPF0758 protein RPB_0700 n=15 Tax=Alphaproteobac... 117 2e-25 UniRef50_B1JAY7 DNA repair protein RadC n=4 Tax=Pseudomonas RepI... 116 2e-25 UniRef50_Q5WTW4 UPF0758 protein lpl2409 n=6 Tax=Legionella RepID... 116 3e-25 UniRef50_A1K759 DNA repair protein n=2 Tax=Rhodocyclaceae RepID=... 115 3e-25 UniRef50_Q31EB6 UPF0758 protein Tcr_1917 n=5 Tax=Gammaproteobact... 115 3e-25 UniRef50_UPI0000E0FF1E DNA repair protein RadC n=1 Tax=Rhodobact... 115 4e-25 UniRef50_B8KU95 DNA repair protein RadC n=1 Tax=gamma proteobact... 112 5e-24 UniRef50_A9IU27 UPF0758 protein Bpet3149 n=5 Tax=Bordetella RepI... 112 5e-24 UniRef50_Q2LSS5 DNA repair protein n=1 Tax=Syntrophus aciditroph... 112 5e-24 UniRef50_A8R890 Putative uncharacterized protein n=1 Tax=Eubacte... 111 7e-24 UniRef50_C2E2B4 DNA repair protein RadC n=8 Tax=Lactobacillus je... 111 7e-24 UniRef50_Q5DY97 DNA repair protein RadC n=17 Tax=Proteobacteria ... 111 8e-24 UniRef50_B9Y7M6 Putative uncharacterized protein n=1 Tax=Holdema... 111 9e-24 UniRef50_C9NPT2 DNA repair protein RadC n=1 Tax=Vibrio coralliil... 110 1e-23 UniRef50_A1UT15 DNA repair protein, RadC family n=3 Tax=Bartonel... 110 2e-23 UniRef50_Q1RK76 DNA repair protein RadC n=11 Tax=Rickettsia RepI... 109 2e-23 UniRef50_C5SK46 DNA repair protein RadC n=1 Tax=Asticcacaulis ex... 109 3e-23 UniRef50_D2BJ47 DNA repair protein n=5 Tax=Dehalococcoides RepID... 109 3e-23 UniRef50_UPI0001BC61BD DNA repair protein radC n=3 Tax=Fusobacte... 108 4e-23 UniRef50_Q02HM7 Putative uncharacterized protein n=1 Tax=Pseudom... 108 5e-23 UniRef50_Q4QPE3 Putative DNA repair radC-like protein n=5 Tax=Ha... 108 6e-23 UniRef50_Q0BRK0 DNA repair protein radC n=5 Tax=Alphaproteobacte... 108 8e-23 UniRef50_A0Z2T6 DNA repair protein RadC n=1 Tax=marine gamma pro... 107 1e-22 UniRef50_UPI000196B4AA hypothetical protein CATMIT_00107 n=1 Tax... 107 1e-22 UniRef50_B1C9I2 Putative uncharacterized protein n=1 Tax=Anaerof... 107 2e-22 UniRef50_C0Q9Z9 RadC3 n=1 Tax=Desulfobacterium autotrophicum HRM... 106 3e-22 UniRef50_C6J5M2 DNA repair protein RadC n=1 Tax=Paenibacillus sp... 105 4e-22 UniRef50_C7JGI7 DNA repair protein RadC n=8 Tax=Acetobacter past... 105 5e-22 UniRef50_A9IEU5 Putative DNA repair protein n=1 Tax=Bordetella p... 105 5e-22 UniRef50_C6XNR3 DNA repair protein RadC n=1 Tax=Hirschia baltica... 105 6e-22 UniRef50_Q3A6E7 DNA repair protein, RadC-like n=3 Tax=Desulfurom... 104 8e-22 UniRef50_C1SJ65 DNA repair protein radc n=1 Tax=Denitrovibrio ac... 104 9e-22 UniRef50_C0BM81 DNA repair protein RadC n=2 Tax=Bacteroidetes Re... 104 1e-21 UniRef50_Q5FNC4 DNA repair protein RadC n=1 Tax=Gluconobacter ox... 103 1e-21 UniRef50_A4J365 DNA repair protein RadC n=1 Tax=Desulfotomaculum... 103 1e-21 UniRef50_D2MNQ5 Putative DNA repair protein RadC n=1 Tax=Bulleid... 102 3e-21 UniRef50_Q04B84 DNA repair protein n=2 Tax=Lactobacillus delbrue... 102 3e-21 UniRef50_C7RDS9 DNA repair protein RadC n=3 Tax=Anaerococcus Rep... 102 3e-21 UniRef50_Q2QJL1 DNA repair protein RadC n=1 Tax=Acetobacter acet... 102 4e-21 UniRef50_A9HJN5 DNA repair protein RadC n=1 Tax=Gluconacetobacte... 102 4e-21 UniRef50_Q1AVT6 UPF0758 protein Rxyl_1530 n=3 Tax=Bacteria RepID... 102 4e-21 UniRef50_A9I305 DNA repair protein radC homolog n=3 Tax=Proteoba... 102 5e-21 UniRef50_D1U9S4 DNA repair protein RadC n=1 Tax=Desulfovibrio ae... 102 5e-21 UniRef50_A9VIS8 UPF0758 protein BcerKBAB4_4299 n=107 Tax=Firmicu... 101 6e-21 UniRef50_Q8UEZ6 UPF0758 protein Atu1607 n=100 Tax=Alphaproteobac... 101 7e-21 UniRef50_D1VVJ8 DNA repair protein RadC-like protein n=1 Tax=Pep... 101 8e-21 UniRef50_Q0AWG3 UPF0758 protein Swol_1642 n=12 Tax=Firmicutes Re... 100 1e-20 UniRef50_B8FHA4 DNA repair protein RadC n=1 Tax=Desulfatibacillu... 100 1e-20 UniRef50_B4CZF8 DNA repair protein RadC n=2 Tax=Verrucomicrobia ... 100 1e-20 UniRef50_Q1WT78 DNA repair protein n=3 Tax=Lactobacillus RepID=Q... 100 2e-20 UniRef50_A5IM26 UPF0758 protein Tpet_1235 n=7 Tax=Thermotogaceae... 100 2e-20 UniRef50_Q38XC8 UPF0758 protein LCA_0852 n=1 Tax=Lactobacillus s... 100 2e-20 UniRef50_C0R2T1 DNA repair protein RadC n=7 Tax=Wolbachia RepID=... 100 2e-20 UniRef50_B6J212 DNA repair protein n=1 Tax=Coxiella burnetii Cbu... 100 2e-20 UniRef50_A0L491 DNA repair protein RadC n=4 Tax=Bacteria RepID=A... 100 2e-20 UniRef50_C6E4Z0 DNA repair protein RadC n=3 Tax=Geobacter RepID=... 100 3e-20 UniRef50_C6VI64 DNA repair protein n=3 Tax=Lactobacillus plantar... 100 3e-20 UniRef50_C8VVH2 DNA repair protein RadC n=1 Tax=Desulfotomaculum... 100 3e-20 UniRef50_C8NZ93 DNA repair protein RadC n=1 Tax=Erysipelothrix r... 99 3e-20 UniRef50_Q3JV52 UPF0758 protein BURPS1710b_1139 n=75 Tax=Proteob... 99 4e-20 UniRef50_B9MPC4 DNA repair protein RadC n=2 Tax=Clostridia RepID... 99 4e-20 UniRef50_A0R7V6 DNA repair protein RadC n=5 Tax=Desulfuromonadal... 99 4e-20 UniRef50_Q2G8R8 DNA repair protein RadC n=5 Tax=Sphingomonadales... 99 4e-20 UniRef50_C4XRP2 DNA repair protein RadC n=4 Tax=Desulfovibrional... 99 5e-20 UniRef50_Q46A65 UPF0758 protein Mbar_A2303 n=2 Tax=Methanosarcin... 99 6e-20 UniRef50_C3WLA1 DNA repair protein radC n=2 Tax=Fusobacterium Re... 98 7e-20 UniRef50_C1QC41 DNA repair protein n=2 Tax=Brachyspira RepID=C1Q... 98 7e-20 UniRef50_C6BYC2 DNA repair protein RadC n=1 Tax=Desulfovibrio sa... 98 9e-20 UniRef50_B1YJT0 DNA repair protein RadC n=2 Tax=Exiguobacterium ... 98 1e-19 UniRef50_C9L5T8 DNA repair protein RadC n=4 Tax=Clostridiales Re... 97 1e-19 UniRef50_C0BG63 DNA repair protein RadC n=1 Tax=Flavobacteria ba... 97 1e-19 UniRef50_Q2GL92 DNA repair protein RadC n=12 Tax=Rickettsiales R... 97 2e-19 UniRef50_A8ZYJ4 DNA repair protein RadC n=1 Tax=Desulfococcus ol... 97 2e-19 UniRef50_B9XSW5 DNA repair protein RadC n=1 Tax=bacterium Ellin5... 97 2e-19 UniRef50_B0S3Y4 UPF0758 protein FMG_0357 n=2 Tax=Finegoldia magn... 97 2e-19 UniRef50_Q1GQ77 DNA repair protein RadC n=1 Tax=Sphingopyxis ala... 96 3e-19 UniRef50_C0QCU0 RadC2 n=2 Tax=Desulfobacterium autotrophicum HRM... 96 3e-19 UniRef50_C8PDJ9 DNA repair protein RadC n=1 Tax=Lactobacillus in... 96 3e-19 UniRef50_C6LCB9 DNA repair protein RadC n=3 Tax=Clostridiales Re... 96 3e-19 UniRef50_B9QT39 DNA repair protein RadC n=1 Tax=Labrenzia alexan... 96 3e-19 UniRef50_B5YL92 DNA repair protein RadC n=1 Tax=Thermodesulfovib... 96 3e-19 UniRef50_D1N9M0 DNA repair protein RadC n=1 Tax=Victivallis vade... 96 3e-19 UniRef50_Q03R16 DNA repair protein n=1 Tax=Lactobacillus brevis ... 96 3e-19 UniRef50_A9KL05 DNA repair protein RadC n=7 Tax=Clostridiales Re... 96 4e-19 UniRef50_B2V090 UPF0758 protein CLH_0547 n=18 Tax=Clostridium Re... 96 4e-19 UniRef50_A5ZRS6 Putative uncharacterized protein n=5 Tax=Clostri... 96 4e-19 UniRef50_C5D8D2 DNA repair protein RadC n=4 Tax=Firmicutes RepID... 96 5e-19 UniRef50_Q82ZX1 UPF0758 protein EF_2926 n=40 Tax=Firmicutes RepI... 96 5e-19 UniRef50_Q6AQC9 Related to DNA repair protein RadC n=4 Tax=Delta... 96 5e-19 UniRef50_Q8RF15 UPF0758 protein FN0909 n=11 Tax=Fusobacterium Re... 96 5e-19 UniRef50_C2BCF6 DNA repair protein RadC n=2 Tax=Anaerococcus Rep... 96 5e-19 UniRef50_A6DS55 DNA repair protein RadC n=1 Tax=Lentisphaera ara... 95 6e-19 UniRef50_A1B298 DNA repair protein RadC n=7 Tax=Bacteria RepID=A... 95 7e-19 UniRef50_A5FMW5 UPF0758 protein Fjoh_0413 n=33 Tax=Bacteroidetes... 95 8e-19 UniRef50_A1BHA1 UPF0758 protein Cpha266_1761 n=11 Tax=Chlorobiac... 95 8e-19 UniRef50_B5YIR9 DNA repair protein n=1 Tax=Thermodesulfovibrio y... 95 9e-19 UniRef50_Q3A8G4 UPF0758 protein Pcar_0065 n=2 Tax=Bacteria RepID... 95 9e-19 UniRef50_B1I0K4 DNA repair protein radC-like protein n=1 Tax=Lys... 94 1e-18 UniRef50_Q0F0W4 DNA repair protein RadC n=1 Tax=Mariprofundus fe... 94 1e-18 UniRef50_Q042N7 DNA repair protein n=7 Tax=Lactobacillus RepID=Q... 94 1e-18 UniRef50_C5TNC6 DNA repair protein RadC n=3 Tax=Neisseria RepID=... 94 1e-18 UniRef50_Q6F7Z8 UPF0758 protein ACIAD3126 n=19 Tax=Proteobacteri... 94 1e-18 UniRef50_Q4FQM6 UPF0758 protein Psyc_1834 n=3 Tax=Moraxellaceae ... 94 1e-18 UniRef50_B6AT60 DNA repair protein RadC n=1 Tax=Rhodobacterales ... 94 1e-18 UniRef50_C0GE80 DNA repair protein RadC n=1 Tax=Dethiobacter alk... 94 1e-18 UniRef50_Q9LAI3 RadC (Fragment) n=2 Tax=Firmicutes RepID=Q9LAI3_... 94 1e-18 UniRef50_B3JIE2 Putative uncharacterized protein n=10 Tax=Bacter... 94 1e-18 UniRef50_B9E733 DNA repair protein RadC homolog n=1 Tax=Macrococ... 94 2e-18 UniRef50_A0LNF4 DNA repair protein RadC n=1 Tax=Syntrophobacter ... 94 2e-18 UniRef50_B5V5B9 RadC n=5 Tax=Firmicutes RepID=B5V5B9_BACCE 93 2e-18 UniRef50_B5CP31 Putative uncharacterized protein n=2 Tax=Clostri... 93 2e-18 UniRef50_A6TQH8 UPF0758 protein Amet_2289 n=54 Tax=cellular orga... 93 3e-18 UniRef50_A6QHJ5 UPF0758 protein NWMN_1555 n=52 Tax=Staphylococcu... 93 3e-18 UniRef50_A8YUM9 DNA repair protein RadC n=9 Tax=Lactobacillus Re... 93 3e-18 UniRef50_B4RM65 UPF0758 protein NGK_1225 n=25 Tax=Neisseriaceae ... 93 3e-18 UniRef50_A2RLC4 UPF0758 protein llmg_1515 n=4 Tax=Lactococcus la... 92 4e-18 UniRef50_B3E339 UPF0758 protein Glov_0523 n=8 Tax=Desulfuromonad... 92 5e-18 UniRef50_B2A699 DNA repair protein RadC n=1 Tax=Natranaerobius t... 92 5e-18 UniRef50_Q93MC6 DNA repair protein RadC n=1 Tax=Clostridium perf... 92 5e-18 UniRef50_A5FRP1 DNA repair protein RadC n=6 Tax=cellular organis... 92 6e-18 UniRef50_C0R372 DNA repair protein RadC, putative n=11 Tax=Wolba... 92 7e-18 UniRef50_Q0FHF8 DNA repair protein RadC n=1 Tax=Roseovarius sp. ... 92 7e-18 UniRef50_Q2B8H5 Putative uncharacterized protein n=1 Tax=Bacillu... 91 1e-17 UniRef50_C0GR82 DNA repair protein RadC n=2 Tax=Desulfonatronosp... 91 1e-17 UniRef50_B4RG10 DNA repair protein RadC n=1 Tax=Phenylobacterium... 91 1e-17 UniRef50_D2QCL1 DNA repair protein RadC n=1 Tax=Spirosoma lingua... 91 1e-17 UniRef50_A4W1K3 UPF0758 protein SSU98_1084 n=76 Tax=Streptococcu... 91 2e-17 UniRef50_Q6MR78 Putative DNA repair protein n=1 Tax=Bdellovibrio... 90 2e-17 UniRef50_C0GMV6 DNA repair protein RadC n=1 Tax=Desulfonatronosp... 90 2e-17 UniRef50_C4V569 DNA repair protein RadC n=2 Tax=Selenomonas RepI... 90 2e-17 UniRef50_Q1LP02 DNA repair protein RadC n=2 Tax=Burkholderiales ... 90 3e-17 UniRef50_C7M9C6 DNA repair protein RadC n=1 Tax=Capnocytophaga o... 90 3e-17 UniRef50_D2EK65 DNA repair protein n=1 Tax=Pediococcus acidilact... 89 3e-17 UniRef50_B2V8J4 DNA repair protein RadC n=5 Tax=Aquificales RepI... 89 5e-17 UniRef50_Q2GEH3 DNA repair protein RadC n=2 Tax=Neorickettsia Re... 89 5e-17 UniRef50_C7VI58 DNA repair protein RadC n=3 Tax=Bacilli RepID=C7... 89 6e-17 UniRef50_B0MUL4 Putative uncharacterized protein n=1 Tax=Alistip... 89 6e-17 UniRef50_A5VEU8 DNA repair protein RadC n=4 Tax=Sphingomonadales... 89 6e-17 UniRef50_C4FYP9 Putative uncharacterized protein n=1 Tax=Abiotro... 89 6e-17 UniRef50_Q64AS5 DNA repair proteins n=1 Tax=uncultured archaeon ... 89 7e-17 UniRef50_C9KJC8 DNA repair protein RadC n=1 Tax=Mitsuokella mult... 88 8e-17 UniRef50_A5URD0 UPF0758 protein RoseRS_0767 n=7 Tax=Bacteria Rep... 88 9e-17 UniRef50_C7GE95 DNA repair protein RadC n=2 Tax=Roseburia RepID=... 88 9e-17 UniRef50_C8WXL6 DNA repair protein RadC n=3 Tax=Alicyclobacillus... 88 1e-16 UniRef50_Q7UL21 DNA repair protein n=4 Tax=Bacteria RepID=Q7UL21... 88 1e-16 UniRef50_C8N8A0 DNA repair protein RadC n=1 Tax=Cardiobacterium ... 88 1e-16 UniRef50_A9NF52 DNA repair protein n=1 Tax=Acholeplasma laidlawi... 87 1e-16 UniRef50_Q4EGF4 DNA repair protein RadC n=7 Tax=Bacilli RepID=Q4... 87 1e-16 UniRef50_A8ZUS2 DNA repair protein RadC n=1 Tax=Desulfococcus ol... 87 1e-16 UniRef50_B9ECC3 Putative uncharacterized protein n=1 Tax=Macroco... 87 2e-16 UniRef50_B0MF12 Putative uncharacterized protein n=3 Tax=Clostri... 87 2e-16 UniRef50_A9BIK5 DNA repair protein RadC n=1 Tax=Petrotoga mobili... 87 2e-16 UniRef50_D0MFA0 DNA repair protein RadC n=1 Tax=Rhodothermus mar... 87 2e-16 UniRef50_C9LCX8 DNA repair protein RadC n=1 Tax=Prevotella tanne... 87 2e-16 UniRef50_Q8DI83 UPF0758 protein tlr1707 n=31 Tax=Cyanobacteria R... 87 2e-16 UniRef50_Q6MAB0 UPF0758 protein pc1765 n=1 Tax=Candidatus Protoc... 87 3e-16 UniRef50_UPI0001C34E02 DNA repair protein RadC n=1 Tax=Clostridi... 86 3e-16 UniRef50_Q1DAY3 DNA repair protein RadC n=1 Tax=Myxococcus xanth... 86 3e-16 UniRef50_A6GHT1 DNA repair protein RadC n=1 Tax=Plesiocystis pac... 86 3e-16 UniRef50_A7HJG0 DNA repair protein RadC n=3 Tax=Thermotogaceae R... 86 3e-16 UniRef50_Q03EP2 DNA repair protein n=1 Tax=Pediococcus pentosace... 86 3e-16 UniRef50_Q3AF80 UPF0758 protein CHY_0341 n=1 Tax=Carboxydothermu... 86 4e-16 UniRef50_UPI0001BC32AB DNA repair protein RadC n=1 Tax=Butyrivib... 86 5e-16 UniRef50_C2KVW9 Possible DNA repair protein RadC n=1 Tax=Oribact... 86 5e-16 UniRef50_B7RA56 DNA repair protein RadC n=1 Tax=Carboxydibrachiu... 85 6e-16 UniRef50_Q1Q559 Similar to DNA repair protein RadC n=1 Tax=Candi... 85 6e-16 UniRef50_A6Q5Q5 DNA repair protein RadC n=2 Tax=unclassified Eps... 85 7e-16 UniRef50_C3DWR5 DNA repair protein RadC n=1 Tax=Bacillus thuring... 85 7e-16 UniRef50_B2KEG6 DNA repair protein RadC n=1 Tax=Elusimicrobium m... 85 7e-16 UniRef50_C2MB02 DNA repair protein RadC n=1 Tax=Porphyromonas ue... 85 8e-16 UniRef50_C0R3D5 DNA repair protein RadC n=2 Tax=Wolbachia RepID=... 85 9e-16 UniRef50_Q7UT53 RadC n=1 Tax=Rhodopirellula baltica RepID=Q7UT53... 85 9e-16 UniRef50_C7TC16 DNA repair protein n=8 Tax=Lactobacillus RepID=C... 84 1e-15 UniRef50_C5NXB5 DNA repair protein RadC homolog n=1 Tax=Gemella ... 84 1e-15 UniRef50_B5YDI9 DNA repair protein n=2 Tax=Dictyoglomus RepID=B5... 84 1e-15 UniRef50_C7GYN9 DNA repair protein RadC n=1 Tax=Eubacterium saph... 84 2e-15 UniRef50_Q7MVX9 UPF0758 protein PG_0894 n=24 Tax=Bacteroidales R... 84 2e-15 UniRef50_O67541 UPF0758 protein aq_1610 n=2 Tax=Aquificaceae Rep... 84 2e-15 UniRef50_A4ITX8 DNA repair protein RadC n=1 Tax=Geobacillus ther... 84 2e-15 UniRef50_A3ER13 DNA repair protein (RadC) n=3 Tax=Leptospirillum... 83 2e-15 UniRef50_A5EYF9 Response regulator receiver domain protein-DNA r... 83 2e-15 UniRef50_A9IG14 Putative DNA repair protein RadC n=1 Tax=Bordete... 83 2e-15 UniRef50_D2RM81 DNA repair protein RadC n=2 Tax=Acidaminococcus ... 83 3e-15 UniRef50_A5KLJ1 Putative uncharacterized protein n=5 Tax=Clostri... 83 3e-15 UniRef50_A1BGW3 DNA repair protein RadC n=2 Tax=Chlorobium RepID... 83 3e-15 UniRef50_C1A4H3 DNA repair protein RadC n=1 Tax=Gemmatimonas aur... 83 3e-15 UniRef50_D1R5B1 Putative uncharacterized protein n=1 Tax=Parachl... 83 3e-15 UniRef50_A6L552 DNA repair protein n=5 Tax=Bacteroidales RepID=A... 83 3e-15 UniRef50_Q65R62 RadC protein n=1 Tax=Mannheimia succiniciproduce... 83 4e-15 UniRef50_UPI00016B261F DNA repair protein RadC n=2 Tax=candidate... 83 4e-15 UniRef50_A8RIH3 Putative uncharacterized protein n=2 Tax=Clostri... 82 4e-15 UniRef50_C5VLA8 DNA repair protein n=1 Tax=Prevotella melaninoge... 82 4e-15 UniRef50_UPI000185C66E DNA repair protein RadC n=1 Tax=Capnocyto... 82 4e-15 UniRef50_C9LLN8 DNA repair protein RadC n=1 Tax=Dialister invisu... 82 4e-15 UniRef50_B2URH1 DNA repair protein RadC n=1 Tax=Akkermansia muci... 82 5e-15 >UniRef50_P52140 UPF0758 protein yfjY n=148 Tax=Enterobacteriaceae RepID=YFJY_ECOLI Length = 160 Score = 244 bits (622), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 117/143 (81%), Positives = 129/143 (90%) Query: 16 RRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHET 75 +R ++RAL LDRHL E GVAFTST A R+WL+L MA LEREEF +LYL+ QNQLIAHET Sbjct: 18 QRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHET 77 Query: 76 LFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVD 135 LF G+I+ TEVHPREVVKRAL+FNAAAVILAHNHPSG+TTPSQADKT+TQRLVQ LQLVD Sbjct: 78 LFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVD 137 Query: 136 IRVPDHLIVGGRQIYSFAEHGLL 158 IRVPDHLIVGGRQIYSFAEHGLL Sbjct: 138 IRVPDHLIVGGRQIYSFAEHGLL 160 >UniRef50_B1IPT7 DNA repair protein RadC n=3 Tax=Enterobacteriaceae RepID=B1IPT7_ECOLC Length = 159 Score = 196 bits (498), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 94/157 (59%), Positives = 121/157 (77%) Query: 2 KQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRV 61 +QL E+ P D++ +++AL L+ L E G +FTS+HAVR+WLRL +A+LEREEF Sbjct: 3 QQLPLFARELAPADQQTVRKALSLLECQLRETGASFTSSHAVRDWLRLQLASLEREEFTA 62 Query: 62 LYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADK 121 L+LDNQ++LIAHETLFTGTIN T+VHPREVVK L N AAVI+AH+HPSGE PS+AD+ Sbjct: 63 LFLDNQHRLIAHETLFTGTINHTQVHPREVVKAGLKHNCAAVIVAHSHPSGEAEPSKADR 122 Query: 122 TLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +T R+ Q L LVDIR+ DHL+VGG +I SFA+ G L Sbjct: 123 QVTTRIQQALDLVDIRLLDHLVVGGMEITSFADRGWL 159 >UniRef50_C8U0Q3 Predicted DNA repair protein n=21 Tax=Enterobacteriaceae RepID=C8U0Q3_ECO10 Length = 180 Score = 184 bits (466), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 87/148 (58%), Positives = 113/148 (76%) Query: 11 MTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQL 70 +TP +R I+RA+ LD++L +PG+AFTS+ A R+WLRLH+A ERE F VLYLDNQ++L Sbjct: 33 LTPYAQRTIRRAMNLLDKYLRQPGIAFTSSTAARDWLRLHLARQEREVFMVLYLDNQHRL 92 Query: 71 IAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQV 130 + ETLF G++N +VH REVVK AL FNAAAV+LAHNHPSG+ PSQ D+ +T RL + Sbjct: 93 LESETLFAGSVNHVQVHSREVVKSALRFNAAAVVLAHNHPSGDPEPSQCDRNITGRLKEA 152 Query: 131 LQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 L+LVD++ DHL+VG I SFAE G L Sbjct: 153 LELVDVKTLDHLVVGRDGIVSFAERGWL 180 >UniRef50_Q8VR59 Putative intergenic-region protein n=24 Tax=Escherichia RepID=Q8VR59_ECOLX Length = 260 Score = 180 bits (457), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 93/155 (60%), Positives = 118/155 (76%), Gaps = 3/155 (1%) Query: 7 LPGEMTPQDRRLIQR-ALRALDRHLHE-PGVAFTSTHAVREW-LRLHMAALEREEFRVLY 63 + G + P + Q+ RA++ + + P + + H++ E + + A R EFRVLY Sbjct: 106 INGNLIPTSQMCNQQTGFRAVEVEVGQAPEMVKKAVHSIAERDVSVLQAFGVRMEFRVLY 165 Query: 64 LDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTL 123 L+NQN+LIA ETLFTGTINRTEVHPREV+KRAL+ NAAAV+LAHNHPSGE TPS+AD+ + Sbjct: 166 LNNQNKLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLI 225 Query: 124 TQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 T+RLVQ L LVDIRVPDHLIVGG Q++SFAEHGLL Sbjct: 226 TERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 260 >UniRef50_B3HA66 DNA repair protein RadC n=3 Tax=Enterobacteriaceae RepID=B3HA66_ECOLX Length = 157 Score = 176 bits (447), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 87/158 (55%), Positives = 114/158 (72%), Gaps = 1/158 (0%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 M +L P + ++R+I+RA+R L+++ PG +F S+ A + WL+LH+A ERE F Sbjct: 1 MSELMLTP-VFSVSEQRVIRRAMRLLEKYQRNPGESFLSSDATKTWLQLHLARQEREMFV 59 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 VLYLDNQN+L+ HETLF GTIN TEVHPRE+VK AL NAAAVILAHNHPSG PS+AD Sbjct: 60 VLYLDNQNRLLEHETLFLGTINSTEVHPREIVKSALRHNAAAVILAHNHPSGVAEPSRAD 119 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 + +T +V+ L LV++RV DH I+G + SFAE G L Sbjct: 120 RLITTNIVKTLDLVNVRVLDHFIIGAGDVLSFAERGWL 157 >UniRef50_C6DAT0 DNA repair protein RadC n=5 Tax=Enterobacteriaceae RepID=C6DAT0_PECCP Length = 157 Score = 154 bits (389), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 75/152 (49%), Positives = 103/152 (67%) Query: 7 LPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDN 66 L G + +++R+IQ AL L++ + + F ++ + WL L ++ LERE F VLYLDN Sbjct: 6 LAGRVASREQRIIQMALCLLEKRVRKNARQFKTSEDTKSWLMLELSNLEREVFMVLYLDN 65 Query: 67 QNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQR 126 Q++LI E + G IN TEVHPRE++K +L NAAAVILAHNHPSG PSQAD+ +T R Sbjct: 66 QHRLIEKEVIALGGINSTEVHPREILKASLRHNAAAVILAHNHPSGWAEPSQADRNITDR 125 Query: 127 LVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 L L +D++V DHL+VG ++ SFAE G L Sbjct: 126 LKDSLSQLDVKVLDHLVVGSTEVVSFAERGWL 157 >UniRef50_Q6TFX1 ORF25 n=3 Tax=Enterobacteriaceae RepID=Q6TFX1_ERWAM Length = 149 Score = 152 bits (385), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 74/121 (61%), Positives = 88/121 (72%) Query: 38 TSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALH 97 T A R LR +AA RE F +L+ N +IA E LF GTI+ VHPR V++RALH Sbjct: 29 TGADAARSLLRFRLAAEPRESFCAFFLNCHNGVIAFEELFKGTISSVTVHPRIVLQRALH 88 Query: 98 FNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGL 157 NAAAV+LAHNHPS TTPSQADK +T+RL QVL +VD++V DHLIVGG IYSFAEHGL Sbjct: 89 HNAAAVVLAHNHPSANTTPSQADKLITERLAQVLGMVDVKVLDHLIVGGSDIYSFAEHGL 148 Query: 158 L 158 + Sbjct: 149 I 149 >UniRef50_A6SWN0 DNA repair protein RadC n=14 Tax=Proteobacteria RepID=A6SWN0_JANMA Length = 190 Score = 150 bits (380), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 72/149 (48%), Positives = 107/149 (71%) Query: 10 EMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQ 69 ++T D ++ RA+ LD H+ + G TS V+++LRL + +RE F V+++D Q++ Sbjct: 41 DLTAVDTWIVHRAIEILDEHVIKHGPKLTSPKDVKDYLRLQLLNEKREVFAVVFMDTQHR 100 Query: 70 LIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQ 129 ++A+E LF GTI++T V+PR +V+RA+ NAA++ILAHNHPSG T PS+ADK LT RL Sbjct: 101 VLAYEPLFFGTIHQTSVYPRAIVQRAMSLNAASMILAHNHPSGSTHPSEADKQLTNRLKS 160 Query: 130 VLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +L+ +D+RV DH I+G +SFAEHGLL Sbjct: 161 LLESIDVRVLDHFIIGEEGTFSFAEHGLL 189 >UniRef50_B4Y2Y7 RadC n=1 Tax=Aquabacterium sp. PL1F5 RepID=B4Y2Y7_9BURK Length = 198 Score = 146 bits (368), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 78/143 (54%), Positives = 98/143 (68%), Gaps = 4/143 (2%) Query: 16 RRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHET 75 R L+ R +R+ + L P +A S V++WL ++ A LE E F VLYLD Q LI E Sbjct: 60 RELLLRNMRS--KMLEGPVMA--SPKVVKDWLSMYCAGLEHEVFLVLYLDAQQVLIEAEE 115 Query: 76 LFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVD 135 LF GT+ +T V+PREVVK AL NAAAV+LAHNHPSG+ +PS AD+ LTQ L L +VD Sbjct: 116 LFRGTLTQTSVYPREVVKNALAHNAAAVLLAHNHPSGQLSPSGADELLTQTLKSSLMMVD 175 Query: 136 IRVPDHLIVGGRQIYSFAEHGLL 158 +RV DH IVGG ++ SFAE GLL Sbjct: 176 VRVLDHFIVGGDRVLSFAEQGLL 198 >UniRef50_A7FEQ9 DNA repair protein, RadC family n=4 Tax=Yersinia RepID=A7FEQ9_YERP3 Length = 162 Score = 144 bits (363), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 75/143 (52%), Positives = 99/143 (69%) Query: 16 RRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHET 75 +++I +AL L+ L TS AV+ WL+LH+ RE F VL+LDN+++L+A ET Sbjct: 18 QQIISQALAILEIQLRHRPYTLTSPEAVKAWLQLHLRPQGRECFMVLFLDNRHRLMASET 77 Query: 76 LFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVD 135 + GT N T V+PREVV RALH AAV++AHNHP+G+ TPSQAD+TLT +LV L +VD Sbjct: 78 VSVGTFNATTVYPREVVIRALHHRCAAVVIAHNHPAGDPTPSQADRTLTAQLVNALNMVD 137 Query: 136 IRVPDHLIVGGRQIYSFAEHGLL 158 IRV DHLI+G + S AE G L Sbjct: 138 IRVLDHLIIGESEPVSLAELGWL 160 >UniRef50_C9Y8Q3 DNA repair protein radC homolog n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y8Q3_9BURK Length = 239 Score = 143 bits (361), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 77/141 (54%), Positives = 99/141 (70%), Gaps = 1/141 (0%) Query: 18 LIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLF 77 +++ A RA+ + L E V F AV+ +L+LH+AA E F VL+LD+QN+L+A E LF Sbjct: 100 VLELARRAMAQRLQEREV-FADPQAVKHYLQLHLAAKGHEVFAVLFLDSQNKLLAMEELF 158 Query: 78 TGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIR 137 GT+ +T V+PREVV RALH AAAV+LAHNHPSG PS+AD+ LTQ L L LVD+R Sbjct: 159 RGTLTQTSVYPREVVIRALHHGAAAVVLAHNHPSGSVQPSRADEALTQTLKAALALVDVR 218 Query: 138 VPDHLIVGGRQIYSFAEHGLL 158 V DH+IVG Q S AE GL+ Sbjct: 219 VLDHIIVGPGQALSMAETGLI 239 >UniRef50_C4SWK5 DNA repair protein n=1 Tax=Yersinia intermedia ATCC 29909 RepID=C4SWK5_YERIN Length = 152 Score = 143 bits (360), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 68/125 (54%), Positives = 90/125 (72%) Query: 34 GVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVK 93 G ST AVRE+L+ +A LE E F VL LDNQ++++A+E LF GT+N ++PRE+VK Sbjct: 28 GDKMFSTEAVREYLKFKLAPLEHEVFSVLLLDNQHRILAYEELFRGTLNAVSIYPREIVK 87 Query: 94 RALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFA 153 +L +NA A+IL HNHPSGE PS ADK +T +L VL L+D++V DHLIV G Q+ S A Sbjct: 88 LSLRYNAGAIILVHNHPSGEPEPSHADKEITNKLKSVLGLLDVQVLDHLIVAGTQVVSLA 147 Query: 154 EHGLL 158 E GL+ Sbjct: 148 ERGLV 152 >UniRef50_A9AE97 DNA repair protein n=8 Tax=Bacteria RepID=A9AE97_BURM1 Length = 169 Score = 140 bits (353), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 70/142 (49%), Positives = 97/142 (68%), Gaps = 1/142 (0%) Query: 17 RLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETL 76 ++++ A + +D+ + G FTS AV+++LR +A E E F VL+LD +++LI + + Sbjct: 29 QILEAARQVIDQKMQR-GDEFTSPAAVKDYLRAKLAGFEHEVFAVLFLDTRHRLIDYAEM 87 Query: 77 FTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDI 136 F GTI+ EVHPREVVK AL NAAAVI++HNHPSG PS AD+ +T +L Q L LVD+ Sbjct: 88 FRGTIDSAEVHPREVVKEALRLNAAAVIISHNHPSGNPEPSAADRAMTSQLRQALALVDV 147 Query: 137 RVPDHLIVGGRQIYSFAEHGLL 158 R DH+IV G SFAE GL+ Sbjct: 148 RTLDHIIVAGGTTTSFAERGLI 169 >UniRef50_Q0AJV4 DNA repair protein RadC n=18 Tax=Proteobacteria RepID=Q0AJV4_NITEC Length = 167 Score = 140 bits (353), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 67/145 (46%), Positives = 97/145 (66%) Query: 14 QDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAH 73 QD R+IQ+A+ L+ + + G AVR++LRL + A E F ++L++Q+Q++A Sbjct: 22 QDDRIIQQAIALLEHRVFKAGPTLDGPKAVRDYLRLKLMAEPNEVFVAVFLNSQHQVLAC 81 Query: 74 ETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQL 133 E LF GT++ V+PR VV+RAL NA+A+I +H HPSG PS AD+ +T RL +L + Sbjct: 82 ECLFKGTVSEASVYPRVVVQRALELNASALIFSHQHPSGVAEPSMADRAITNRLKFILSM 141 Query: 134 VDIRVPDHLIVGGRQIYSFAEHGLL 158 +DIRV DH I+G + YSFAE GLL Sbjct: 142 IDIRVVDHFIIGKGEPYSFAESGLL 166 >UniRef50_A1TJG0 DNA repair protein RadC n=1 Tax=Acidovorax citrulli AAC00-1 RepID=A1TJG0_ACIAC Length = 167 Score = 140 bits (353), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 71/148 (47%), Positives = 99/148 (66%) Query: 11 MTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQL 70 +T Q+ RL+ RAL L++ + A ++ + ++LRL +A E F V++LD QN+ Sbjct: 20 LTVQESRLVHRALHVLEQRMFHREAAISTPRELYDYLRLKLAGELHEVFGVVFLDCQNRA 79 Query: 71 IAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQV 130 IA E LF GTIN+ V+PR +VKRA+ NA++VIL HNHPSG + S AD+ LT+R+ Sbjct: 80 IAFEALFRGTINQAVVYPRVIVKRAMDLNASSVILVHNHPSGTSQCSDADRGLTERICAS 139 Query: 131 LQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 L L+D+RV DH+IVG YSFAE GLL Sbjct: 140 LGLIDVRVVDHVIVGSGTPYSFAEAGLL 167 >UniRef50_D2NHT0 Putative phage DNA repair protein n=1 Tax=Escherichia coli SE15 RepID=D2NHT0_ECOLX Length = 156 Score = 140 bits (352), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 70/147 (47%), Positives = 99/147 (67%), Gaps = 1/147 (0%) Query: 12 TPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLI 71 T ++ R++ +A + R+ ++ GV S VR + + +A LE EEF ++ LDNQNQL+ Sbjct: 11 TQRETRILDQARDIISRY-YQRGVQLCSPDDVRRCVMVELAPLEHEEFGIILLDNQNQLL 69 Query: 72 AHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVL 131 E LF GT+N VHPREV+KR L NAAAVIL HNHPSGE PS+ D LT++L ++L Sbjct: 70 HREILFRGTLNSVSVHPREVIKRVLKHNAAAVILVHNHPSGEPEPSRCDIQLTKKLQELL 129 Query: 132 QLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +++D+R+ DH IV G + S AE GL+ Sbjct: 130 EILDVRLLDHFIVAGTETVSMAERGLV 156 >UniRef50_Q46XP0 UPF0758 protein Reut_A2732 n=12 Tax=Proteobacteria RepID=Y2732_RALEJ Length = 228 Score = 139 bits (350), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 71/137 (51%), Positives = 94/137 (68%), Gaps = 1/137 (0%) Query: 22 ALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTI 81 A R L L P S AVR +LRL +A L +E F L+LD +N++IA E LF GT+ Sbjct: 89 ARRMLAESLELPS-GLDSPAAVRSYLRLTLAPLAQEVFVCLFLDTRNRMIASEELFRGTL 147 Query: 82 NRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDH 141 N+T V+PREV +RAL NAA+VI+AHNHPSG TPSQ+D +T+ L + L L+D+R+ DH Sbjct: 148 NQTAVYPREVARRALAHNAASVIVAHNHPSGCCTPSQSDLQMTRMLARALDLIDVRLLDH 207 Query: 142 LIVGGRQIYSFAEHGLL 158 +V G ++SFAEHG L Sbjct: 208 FVVAGTHVHSFAEHGEL 224 >UniRef50_Q7VMM9 Conserved possible DNA repair protein n=1 Tax=Haemophilus ducreyi RepID=Q7VMM9_HAEDU Length = 157 Score = 139 bits (349), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 68/156 (43%), Positives = 93/156 (59%) Query: 3 QLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVL 62 QLS +M Q + L + LR + +F E+ ++ + ERE F VL Sbjct: 2 QLSTQHQDMLNQAKALYENVLRETGIRSYASNPSFGDEKEASEYCQMQLGFEEREVFGVL 61 Query: 63 YLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKT 122 + D QN+LI E LF GTIN+ +HPRE+VK+AL N++AVIL HNHPSG+ TPSQ+DK Sbjct: 62 FWDTQNRLIRFEKLFFGTINQASIHPREIVKKALELNSSAVILTHNHPSGQVTPSQSDKQ 121 Query: 123 LTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 T ++ Q QL+D+ V DH+IV YSF H L+ Sbjct: 122 TTAKIKQACQLIDVNVLDHIIVSATDTYSFCMHQLM 157 >UniRef50_Q9KUK8 UPF0758 protein VC_0510 n=11 Tax=Gammaproteobacteria RepID=Y510_VIBCH Length = 157 Score = 137 bits (345), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 69/125 (55%), Positives = 87/125 (69%), Gaps = 1/125 (0%) Query: 34 GVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVK 93 G A T+ A +E++R + + ERE F +L LDNQN+LI + LF GT++ V+PREVVK Sbjct: 34 GDALTNPDATKEYVRCKLGSYEREVFALLLLDNQNRLIEFKELFQGTVDAASVYPREVVK 93 Query: 94 RALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFA 153 L NAAAVI AHNHPSG++TPSQAD+ +T+RL L LVD+RV DH IV G SFA Sbjct: 94 AVLEVNAAAVIFAHNHPSGDSTPSQADRRITERLKDTLALVDVRVLDH-IVTGDTCTSFA 152 Query: 154 EHGLL 158 E G L Sbjct: 153 ERGWL 157 >UniRef50_A7MQ95 UPF0758 protein ESA_04094 n=32 Tax=Bacteria RepID=Y4094_ENTS8 Length = 230 Score = 137 bits (345), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 65/123 (52%), Positives = 88/123 (71%) Query: 36 AFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRA 95 A S R++L +A ERE F V++LD+QN++I TLFTGT++ EVHPRE+V+ A Sbjct: 108 ALLSPTITRDFLESQLAEQEREVFLVIFLDSQNRIIRQNTLFTGTLSHVEVHPREIVREA 167 Query: 96 LHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEH 155 + NAA +ILAHNHPSG PS+ADK +T+R+V+ QLVDIRV DHL++G + SFAE Sbjct: 168 VRLNAAGIILAHNHPSGRAEPSRADKMVTERIVKSCQLVDIRVLDHLVIGRGEYVSFAER 227 Query: 156 GLL 158 G + Sbjct: 228 GWI 230 >UniRef50_C5V0A3 DNA repair protein RadC n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V0A3_9PROT Length = 205 Score = 137 bits (345), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 73/157 (46%), Positives = 100/157 (63%), Gaps = 3/157 (1%) Query: 2 KQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRV 61 KQ + P + + L+ +RAL + + + + V+++L+L + ++E F V Sbjct: 52 KQPHYAPAAIISAAKELV---MRALSEDITQNPINLNNPVEVKKYLKLLLGGRQQEVFVV 108 Query: 62 LYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADK 121 L+LD Q++LIA E LF GT+ +T V+PREVVKRAL NAAAV+LAHNHPSG PSQAD+ Sbjct: 109 LFLDTQHRLIAAEELFHGTLTQTSVYPREVVKRALMHNAAAVLLAHNHPSGLAEPSQADQ 168 Query: 122 TLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 LT L Q L LVD+R DH I+G SFAE GL+ Sbjct: 169 LLTNALKQALALVDVRALDHFIIGDESALSFAERGLI 205 >UniRef50_Q47ZW8 DNA repair protein, RadC family protein n=20 Tax=Gammaproteobacteria RepID=Q47ZW8_COLP3 Length = 158 Score = 135 bits (341), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 69/123 (56%), Positives = 89/123 (72%), Gaps = 1/123 (0%) Query: 36 AFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRA 95 AFTS+ A +++LR +A E E F V+ LDNQ+Q+I LF GTI+ + V+PREVVK Sbjct: 37 AFTSSQATKDFLRFKLANKEHEIFAVMLLDNQHQMIDFVELFRGTIDASAVYPREVVKTV 96 Query: 96 LHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEH 155 L NAAAVIL HNHPSG +PS ADK +T+RL + L L+D+RV DH+I+ G YSFAE+ Sbjct: 97 LLENAAAVILTHNHPSGLNSPSIADKDITKRLQEALALIDVRVLDHIII-GEGTYSFAEN 155 Query: 156 GLL 158 GLL Sbjct: 156 GLL 158 >UniRef50_B0UUW7 UPF0758 protein HSM_0009 n=10 Tax=Pasteurellaceae RepID=Y009_HAES2 Length = 222 Score = 135 bits (340), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 63/120 (52%), Positives = 87/120 (72%) Query: 37 FTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRAL 96 FTS VR +L+ + +RE F VL+LDNQ++LI E +F GTIN+ V+PRE++K AL Sbjct: 101 FTSPDTVRMYLQTELENKDREIFMVLFLDNQHRLIKKEEMFLGTINQANVYPREIIKTAL 160 Query: 97 HFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHG 156 NAAA+ILAHNHPSG +TPS AD+ +T+ + Q+ +L++IRV DH I+G +SFAE G Sbjct: 161 FCNAAALILAHNHPSGVSTPSMADRKMTENIKQLSELMEIRVLDHFIIGKGNYFSFAEQG 220 >UniRef50_Q5E054 DNA repair protein RadC n=3 Tax=Gammaproteobacteria RepID=Q5E054_VIBF1 Length = 157 Score = 135 bits (340), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 68/125 (54%), Positives = 89/125 (71%), Gaps = 1/125 (0%) Query: 34 GVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVK 93 G AF++ A + +LR + ERE F VL LDNQ++LI + LF GT++ V+PREVVK Sbjct: 34 GDAFSNPTATQNYLRYKLGHYEREVFAVLLLDNQHRLIEFKELFQGTVDAASVYPREVVK 93 Query: 94 RALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFA 153 L NAAAVI AHNHPSGE+TPSQADK +T RL + L L+D++V DH++VG + SFA Sbjct: 94 AVLEVNAAAVIFAHNHPSGESTPSQADKRITTRLKEALALIDVQVLDHIVVGETCV-SFA 152 Query: 154 EHGLL 158 E GL+ Sbjct: 153 ERGLI 157 >UniRef50_Q9KR57 UPF0758 protein VC_1786 n=59 Tax=Proteobacteria RepID=Y1786_VIBCH Length = 158 Score = 135 bits (339), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 69/125 (55%), Positives = 86/125 (68%), Gaps = 1/125 (0%) Query: 34 GVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVK 93 G F T E+LR +A E E F VL+LDNQ++LI + LF GT++ V+PREV+K Sbjct: 35 GETFARTENTTEYLRCKLAGYEHEIFAVLFLDNQHRLIEFKELFRGTVDAASVYPREVLK 94 Query: 94 RALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFA 153 AL+ NAAAVI AHNHPSG+ PSQAD+ +TQRL L LVDIRV DH++VG + SFA Sbjct: 95 EALNVNAAAVIFAHNHPSGDPEPSQADRRITQRLKDALSLVDIRVLDHVVVGKSSV-SFA 153 Query: 154 EHGLL 158 E G L Sbjct: 154 ERGWL 158 >UniRef50_Q21TE2 UPF0758 protein Rfer_3252 n=12 Tax=cellular organisms RepID=Y3252_RHOFD Length = 234 Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 72/135 (53%), Positives = 94/135 (69%), Gaps = 1/135 (0%) Query: 24 RALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINR 83 RAL + L E + F + AV+ +L+LH+AA E F VL+LD QN+L+A E LF GT+ + Sbjct: 101 RALAQQLKERTI-FATPDAVKHYLQLHLAAKPHEVFAVLFLDVQNRLLALEELFRGTLTQ 159 Query: 84 TEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLI 143 T V+PREVV RALH A++V+LAHNHPSG PS+AD+ LTQ L L L+D+RV DH+I Sbjct: 160 TSVYPREVVLRALHHQASSVVLAHNHPSGTVQPSRADEMLTQTLKTTLALIDVRVLDHVI 219 Query: 144 VGGRQIYSFAEHGLL 158 V + S AE GLL Sbjct: 220 VAPGEALSMAERGLL 234 >UniRef50_B5EXE3 UPF0758 protein yicR n=116 Tax=Enterobacteriaceae RepID=YICR_SALA4 Length = 221 Score = 133 bits (335), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 62/121 (51%), Positives = 86/121 (71%) Query: 36 AFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRA 95 A S RE+L+ + ERE F V++LD Q++++ H LF+GT+N EVHPRE+V+ A Sbjct: 99 ALLSPEMTREFLQSQLTGEEREIFLVIFLDAQHRVLQHSRLFSGTLNHVEVHPREIVREA 158 Query: 96 LHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEH 155 + NA+AVILAHNHPSG PS+ADK +T+R+++ Q +DIRV DHLI+G + SFAE Sbjct: 159 IKLNASAVILAHNHPSGCAEPSKADKLITERVIKCCQFMDIRVLDHLIIGRGEYVSFAER 218 Query: 156 G 156 G Sbjct: 219 G 219 >UniRef50_C5SDF8 DNA repair protein RadC n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SDF8_CHRVI Length = 167 Score = 133 bits (335), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 69/144 (47%), Positives = 96/144 (66%) Query: 15 DRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHE 74 +R L+ A+ L+RH A TS A R++L+L + L E F VL LDN+++++ ++ Sbjct: 24 ERTLVAEAIDCLERHYRVAQEALTSPDATRDYLKLRLYGLTYEVFAVLLLDNRHRVLRYQ 83 Query: 75 TLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLV 134 LF GTI+ VHPREVV+ + AAAVI AHNHPSG + PSQAD+TLT++L L L+ Sbjct: 84 ELFRGTIDTAYVHPREVVRLVIESGAAAVIFAHNHPSGSSDPSQADRTLTRKLQDALALI 143 Query: 135 DIRVPDHLIVGGRQIYSFAEHGLL 158 ++RV DH+IVG + SFAE G L Sbjct: 144 EVRVLDHIIVGEGRGMSFAEQGWL 167 >UniRef50_Q0ACW7 DNA repair protein RadC n=2 Tax=Proteobacteria RepID=Q0ACW7_NITEC Length = 173 Score = 131 bits (330), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 66/152 (43%), Positives = 91/152 (59%) Query: 7 LPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDN 66 L G T +I A RA + A T ++ + + E E F +++L++ Sbjct: 22 LEGRYTVASDEMIFTATRAAIERKYPANTAMTKPEIAADYFKNKLNGFEHEVFSIIFLNS 81 Query: 67 QNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQR 126 Q +LIA+ +F GT+ V+PREVVK A+ +NAAAVILAH HPS ET PSQADK +T+R Sbjct: 82 QYRLIAYREMFQGTLTCASVYPREVVKAAISYNAAAVILAHCHPSKETEPSQADKAITKR 141 Query: 127 LVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 L + L L+D+ V DH+IVGG S AE GL+ Sbjct: 142 LKEALDLIDVCVLDHIIVGGNTTKSMAEMGLV 173 >UniRef50_C4LDH2 DNA repair protein RadC n=2 Tax=Aeromonadaceae RepID=C4LDH2_TOLAT Length = 165 Score = 131 bits (330), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 70/143 (48%), Positives = 90/143 (62%), Gaps = 8/143 (5%) Query: 16 RRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHET 75 RRL + L A + P AF +L+ M E E F L+LDNQ+++I E Sbjct: 31 RRLAKNRL-AKGCSIERPSSAFI-------YLQALMGNYENEVFGSLFLDNQHRIICFEE 82 Query: 76 LFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVD 135 LF GT+N T +HPREVVKRAL NAAAVI HNHPSGE PS+ADK +T +L + L L+D Sbjct: 83 LFRGTLNVTNIHPREVVKRALAVNAAAVIFVHNHPSGEPEPSEADKKITVQLRETLNLID 142 Query: 136 IRVPDHLIVGGRQIYSFAEHGLL 158 +RV DH++VG + S AE GL+ Sbjct: 143 VRVLDHIVVGAKACISMAERGLV 165 >UniRef50_Q4UPP0 UPF0758 protein XC_3944 n=35 Tax=Proteobacteria RepID=Y3944_XANC8 Length = 225 Score = 130 bits (326), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 73/158 (46%), Positives = 99/158 (62%), Gaps = 4/158 (2%) Query: 2 KQLSFLPGEMTPQDRRLIQRALRALDRHLH---EPGVAFTSTHAVREWLRLHMAALEREE 58 K L+ LPG + P + AL +RHL E G A + +V + + A E Sbjct: 66 KALARLPG-LGPASACKLSAALELANRHLLSDLERGEALSDPSSVGRYFSQRLRARNYEV 124 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 F L+LD++++ IA E LFTGTI+ E+HPREVV+RAL NAAAV++ HNHPSG PS+ Sbjct: 125 FAALFLDSRHRAIAFEELFTGTIDAAEIHPREVVRRALLHNAAAVVVGHNHPSGNPEPSE 184 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHG 156 AD+ +TQRL+Q L LVDIR+ DH ++G + S AE G Sbjct: 185 ADRAVTQRLLQALGLVDIRLLDHFVIGDGRPVSLAERG 222 >UniRef50_Q2S8K4 DNA repair protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S8K4_HAHCH Length = 207 Score = 129 bits (324), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 65/127 (51%), Positives = 87/127 (68%), Gaps = 3/127 (2%) Query: 34 GVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVK 93 G AF A + +L L +A E+E F ++LDNQN+LI+ E LF GTI++ V+PRE+VK Sbjct: 80 GKAFCDPDATKYYLVLQLAEHEQEVFACMFLDNQNRLISFEKLFYGTIDQASVYPREIVK 139 Query: 94 RALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVG--GRQIYS 151 RAL NAAAVILAHNHPSG + PS AD +T+ + L L+D+RV DH++VG G + S Sbjct: 140 RALMLNAAAVILAHNHPSGMSEPSVADIAMTKTVKSSLALIDVRVLDHIVVGSDGSSV-S 198 Query: 152 FAEHGLL 158 F E G + Sbjct: 199 FIERGYM 205 >UniRef50_Q2SAN5 DNA repair protein n=2 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SAN5_HAHCH Length = 183 Score = 129 bits (324), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 70/154 (45%), Positives = 94/154 (61%), Gaps = 4/154 (2%) Query: 9 GEMT---PQDRRLIQRAL-RALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYL 64 GE T P D ++ +A RAL + V+E+L +H+A RE F L+L Sbjct: 18 GEFTLSAPLDSDIVLKAAKRALAQRFKRHSCHMDDPGKVKEYLMMHLAPEPRETFVGLFL 77 Query: 65 DNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLT 124 D QN+LIA+E LF G I+ ++PREVVK AL NAA VI+AHNHPSG+ PS D+ +T Sbjct: 78 DTQNRLIAYEVLFRGAIDEAHIYPREVVKAALRHNAAKVIVAHNHPSGDPKPSVNDQLIT 137 Query: 125 QRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 RL+Q L LV+I + DH +VGG Q+ S A G+ Sbjct: 138 YRLLQALMLVEIPLIDHFVVGGDQVVSMAAQGIF 171 >UniRef50_A4W511 UPF0758 protein Ent638_0101 n=3 Tax=Enterobacteriaceae RepID=Y101_ENT38 Length = 221 Score = 129 bits (323), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 57/120 (47%), Positives = 85/120 (70%) Query: 39 STHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHF 98 S +++L+ ++ ERE F V++LDNQ++++ H +F+GT+ EVHPRE+V+ A+ Sbjct: 102 SPEMTKDFLQSQLSDAEREVFMVIFLDNQHRVVKHSRMFSGTLRHVEVHPREIVREAIKV 161 Query: 99 NAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 NAAAVILAHNHPSG PS+ADK +T+R+++ Q +DI V DH I+G + SFAE G + Sbjct: 162 NAAAVILAHNHPSGCAEPSKADKDITERIIKCCQFMDIHVLDHFIIGRGEYVSFAEQGWI 221 >UniRef50_Q3JDF2 DNA repair protein RadC n=4 Tax=Gammaproteobacteria RepID=Q3JDF2_NITOC Length = 171 Score = 128 bits (322), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 69/146 (47%), Positives = 95/146 (65%), Gaps = 1/146 (0%) Query: 13 PQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIA 72 P+ + L++ A L LH+PGV S + R++LR+ +A + E F LYLDN++++I Sbjct: 27 PEKQSLLELAFAVL-HDLHQPGVELPSPNHTRDFLRMLLAERKAEVFGCLYLDNRHRVIE 85 Query: 73 HETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQ 132 LF GTI+ V+PR VV++AL NAAAV+ HNHPSG PS AD+ +T+RL + L Sbjct: 86 TVELFQGTIDGASVYPRVVVQQALSVNAAAVMFFHNHPSGVAEPSNADEAITRRLKEALA 145 Query: 133 LVDIRVPDHLIVGGRQIYSFAEHGLL 158 LVDIRV DH +V + SFAE GLL Sbjct: 146 LVDIRVLDHFVVTAGESISFAERGLL 171 >UniRef50_B2UAP0 UPF0758 protein Rpic_2712 n=3 Tax=Burkholderiaceae RepID=Y2712_RALPJ Length = 224 Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 66/139 (47%), Positives = 91/139 (65%), Gaps = 1/139 (0%) Query: 18 LIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLF 77 L++ A RAL + G F S +V+++LRL + E F +LD +++LIA E LF Sbjct: 85 LLEVARRALKEDFTQ-GQTFESAQSVKDFLRLTLGHRPHEVFACFFLDVRHRLIAWEELF 143 Query: 78 TGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIR 137 GT+ V+PRE+ KRALH NAAAVILAHNHP+G T PS++D LT+ L + L ++D+ Sbjct: 144 RGTLTEARVYPREIAKRALHHNAAAVILAHNHPTGNTEPSESDVILTRELCRALAMLDVI 203 Query: 138 VPDHLIVGGRQIYSFAEHG 156 V DH+IVG +Y F EHG Sbjct: 204 VLDHMIVGRNHVYGFLEHG 222 >UniRef50_A5UDB6 UPF0758 protein CGSHiEE_07200 n=30 Tax=Gammaproteobacteria RepID=Y7200_HAEIE Length = 221 Score = 127 bits (318), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 60/104 (57%), Positives = 79/104 (75%) Query: 55 EREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGET 114 ERE F VL+LDNQ++LI E LF GTIN + V+PRE++K AL+ NAAA+ILAHNHPSG T Sbjct: 118 EREVFMVLFLDNQHRLIKKERLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGVT 177 Query: 115 TPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 PS +D+ +T+++ +L++I V DHLIVG YSFAE+ LL Sbjct: 178 EPSYSDQLITKKIQDAAELMEICVLDHLIVGKSDCYSFAENCLL 221 >UniRef50_B0T9F0 DNA repair protein RadC n=1 Tax=Caulobacter sp. K31 RepID=B0T9F0_CAUSK Length = 223 Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 66/157 (42%), Positives = 98/157 (62%) Query: 2 KQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRV 61 QL GE+ D +L++ A R + R TS V ++LR MA L REEF V Sbjct: 67 SQLHLAVGELAAMDLKLLREAARRVTRADLAQRQLLTSFSQVADYLRALMAGLPREEFWV 126 Query: 62 LYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADK 121 L+LD +NQL++ E L G+++ V+PREV++RAL N +A+ILAHNHPSG+ PSQ D Sbjct: 127 LFLDRRNQLLSAERLGVGSVDHAPVYPREVMRRALELNCSAMILAHNHPSGDPQPSQPDI 186 Query: 122 TLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +T+ L++ + + I++ DH+IV G + SF +GL+ Sbjct: 187 EMTKTLIEAGKALQIQIHDHMIVAGGAVVSFRANGLI 223 >UniRef50_D1AWS8 DNA repair protein RadC n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AWS8_STRM9 Length = 211 Score = 126 bits (316), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 49/112 (43%), Positives = 79/112 (70%) Query: 45 EWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVI 104 ++L+ +ERE F+VLY + +N LI E +F GTI+++ V+ RE+VK L +NA ++I Sbjct: 98 KYLKFQYVDMEREVFKVLYFNTKNVLIKDENIFYGTIDKSVVYVREIVKNILKYNAKSII 157 Query: 105 LAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHG 156 + HNHPSG PS D+ LT++++ VL+L+D+R+ DH+I+ + YSF E+G Sbjct: 158 IVHNHPSGNLEPSNDDRCLTKKIIDVLKLIDVRLSDHIIISNKGYYSFLENG 209 >UniRef50_B0T9R6 DNA repair protein RadC n=4 Tax=Alphaproteobacteria RepID=B0T9R6_CAUSK Length = 253 Score = 125 bits (313), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 64/127 (50%), Positives = 88/127 (69%), Gaps = 1/127 (0%) Query: 33 PG-VAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREV 91 PG +S A+ ++L+L MA ERE FRVL+LD +NQLIA E L GT++ V+PREV Sbjct: 127 PGRCVVSSWTALIDYLKLTMAHCEREAFRVLFLDKKNQLIADEILNHGTVDHAPVYPREV 186 Query: 92 VKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYS 151 V+RAL +A+AVIL HNHPSG+ TPS AD +T+++V + + I V DH+IVG ++ S Sbjct: 187 VRRALEVSASAVILVHNHPSGDQTPSSADIEMTKKVVDAARTLGIAVHDHVIVGRAEVAS 246 Query: 152 FAEHGLL 158 F GL+ Sbjct: 247 FKALGLI 253 >UniRef50_B1HKP9 DNA repair protein n=1 Tax=Burkholderia pseudomallei S13 RepID=B1HKP9_BURPS Length = 165 Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 65/148 (43%), Positives = 96/148 (64%) Query: 11 MTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQL 70 +T + +LI A+ L+R L + G A TS ++LRL M +RE F V++LD +++ Sbjct: 18 LTSAEHQLIHDAIAVLERRLFQRGPALTSPQNAIDYLRLTMTREDREVFTVIFLDTHHRV 77 Query: 71 IAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQV 130 IA E LF G I+ + R ++ RA+ N+ A+I+AHNHPSGET PS AD+ LT L + Sbjct: 78 IAVEPLFYGGIDGAHISSRVILHRAILLNSTAIIVAHNHPSGETQPSPADQRLTAELAAL 137 Query: 131 LQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 L+LVD+R+ DH I+G + +SFA+ GLL Sbjct: 138 LRLVDMRLLDHFIIGRGEPFSFAQAGLL 165 >UniRef50_B8KQ45 DNA repair protein RadC n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KQ45_9GAMM Length = 177 Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 68/153 (44%), Positives = 93/153 (60%), Gaps = 1/153 (0%) Query: 6 FLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLD 65 F P TP +R+I++AL L+ L A TS VR++ +L + E F L+L Sbjct: 26 FQPDAWTPAQQRIIEKALALLESRLINSD-ALTSPVRVRQYCQLQLGHERDEHFACLFLT 84 Query: 66 NQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQ 125 Q+ I+ E F G+I+ V+PR +V+R L NAAAVIL HNHPSG + PS AD+ +T Sbjct: 85 AQHHAISFEIQFRGSIDGAAVYPRVIVRRCLELNAAAVILVHNHPSGVSEPSPADRQITV 144 Query: 126 RLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 RL + L+L+D+RV DHLIV SFA+ GLL Sbjct: 145 RLQRALELIDVRVVDHLIVSAGDATSFAQAGLL 177 >UniRef50_B0RXB0 DNA repair protein radC homolog n=3 Tax=Xanthomonas campestris pv. campestris str. B100 RepID=B0RXB0_XANCB Length = 159 Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 61/111 (54%), Positives = 79/111 (71%) Query: 46 WLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVIL 105 +L A L E F V++LDNQ+ ++A E LF+GTI+ E+HPR V KRAL NAAAVIL Sbjct: 47 YLVARCAHLSHEIFGVVFLDNQHHILAAEHLFSGTIDGCEIHPRVVAKRALELNAAAVIL 106 Query: 106 AHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHG 156 HNHPSG PS+AD+ +TQRL + L L+DIRV DHL++GG++ S A G Sbjct: 107 FHNHPSGNPEPSEADRKVTQRLQEALGLLDIRVLDHLVIGGQKSVSLAARG 157 >UniRef50_D1JB12 Probable DNA repair protein radC homolog n=2 Tax=uncultured archaeon RepID=D1JB12_9ARCH Length = 330 Score = 122 bits (305), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 56/120 (46%), Positives = 83/120 (69%) Query: 39 STHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHF 98 ++ V ++L L M L+ E F+V++LD+ NQ I E LF GT+N + V+PRE+VK A++ Sbjct: 192 NSKEVFDYLYLTMRDLKIEIFKVIFLDSANQTIDDENLFEGTLNASSVYPREIVKSAVNK 251 Query: 99 NAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 NAA++I HNHPSG+ TPS +D+ +T+ L+ LV I V DH+I+G +SFA+ GLL Sbjct: 252 NAASLIFVHNHPSGDPTPSGSDRAITEDLIYACNLVQITVLDHIIIGDNVYFSFADEGLL 311 >UniRef50_B2FJW1 UPF0758 protein Smlt0399 n=129 Tax=Proteobacteria RepID=Y399_STRMK Length = 234 Score = 121 bits (304), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 64/117 (54%), Positives = 81/117 (69%) Query: 42 AVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAA 101 AV +L+ + RE F L+LDN+++LIA E LF GTIN V+PREVV+RAL NAA Sbjct: 109 AVGRYLQHRLRGQAREVFMALFLDNRHRLIACEELFHGTINAAPVYPREVVRRALLHNAA 168 Query: 102 AVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 AVIL+HNHPSG+ PS AD +T L Q L +VD+R+ DH +VG + SFAE GLL Sbjct: 169 AVILSHNHPSGDPEPSSADTRITDELQQALAMVDVRLLDHFVVGEGRPVSFAERGLL 225 >UniRef50_A1SR15 UPF0758 protein Ping_0056 n=2 Tax=Gammaproteobacteria RepID=Y056_PSYIN Length = 225 Score = 121 bits (304), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 62/143 (43%), Positives = 89/143 (62%), Gaps = 3/143 (2%) Query: 19 IQRALRALDRHLHEP---GVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHET 75 +Q L R+L EP G A TS + +L M L E F + LD Q+++I Sbjct: 83 LQAVLEMSSRYLQEPLSKGNALTSAAQTKAFLIAKMHNLPYEVFAAILLDTQHRIIRFHE 142 Query: 76 LFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVD 135 F G+I+ VHPR + ++ L NAAA+IL HNHPSG+ + S+ADK +TQ++V LQL+D Sbjct: 143 FFFGSIDCATVHPRIIAQKVLSENAAAIILVHNHPSGDPSASEADKMITQKIVSALQLID 202 Query: 136 IRVPDHLIVGGRQIYSFAEHGLL 158 +RV DHL+VG ++ SFAE+G + Sbjct: 203 VRVLDHLVVGHKKCTSFAENGWI 225 >UniRef50_C3WF45 Putative uncharacterized protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WF45_FUSMR Length = 154 Score = 120 bits (302), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 52/114 (45%), Positives = 85/114 (74%) Query: 45 EWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVI 104 E+L+++++ EEF++L+L+N N+LIA +TLF GTI+++ V+PR V++ L +N+A VI Sbjct: 41 EFLKINLSPRNNEEFKILFLNNANKLIAEKTLFYGTIDKSAVYPRVVLEEVLRYNSAGVI 100 Query: 105 LAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 LAHNHPSG PS+ D LT+ L ++L+ +++ V DH+I+G + +SF E GL+ Sbjct: 101 LAHNHPSGNLRPSKQDIQLTEALQELLEKINVMVLDHMIIGDDEYFSFREEGLI 154 >UniRef50_Q3BQ28 RadC family DNA repair protein n=5 Tax=Xanthomonas RepID=Q3BQ28_XANC5 Length = 187 Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 62/112 (55%), Positives = 79/112 (70%) Query: 45 EWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVI 104 ++L A L E F V++LD ++Q++A E LF GTI+ EVHPR V KRAL NAAAVI Sbjct: 74 DYLISRCAHLPHEVFGVVFLDIKHQILATEHLFFGTIDGCEVHPRVVAKRALDLNAAAVI 133 Query: 105 LAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHG 156 L HNHPSG PS+AD+ +T+RL + L L+DIRV DHL++GGRQ S A G Sbjct: 134 LFHNHPSGNPEPSEADRKVTERLQKALSLLDIRVLDHLVIGGRQHISLAARG 185 >UniRef50_B7C9V0 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9V0_9FIRM Length = 224 Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 54/116 (46%), Positives = 75/116 (64%) Query: 43 VREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAA 102 V EW + + +E F LYLD +++LI+H LF GT+N + VHPREV K A NA + Sbjct: 108 VIEWFKFEYGTMSQECFIALYLDTKSKLISHRVLFKGTLNESVVHPREVFKEAFLQNANS 167 Query: 103 VILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 V++AHNHPSG+ TPS+AD +T ++V V + + + DH+IV Q YSF EH L Sbjct: 168 VLIAHNHPSGDCTPSKADFEVTYKMVHVAMTMGVCLVDHIIVCKNQYYSFKEHKYL 223 >UniRef50_Q47CZ3 DNA repair protein RadC n=2 Tax=Dechloromonas aromatica RCB RepID=Q47CZ3_DECAR Length = 193 Score = 118 bits (296), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 76/143 (53%), Positives = 97/143 (67%), Gaps = 4/143 (2%) Query: 16 RRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHET 75 R L+ R LR ++ P +A S +R+WLRLH A L+ E F V+YLD ++LI E Sbjct: 55 RELLLRDLR--EQMCDSPVMA--SPQVLRDWLRLHCAGLQHEVFLVIYLDAHHRLIEAEE 110 Query: 76 LFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVD 135 LF GT+ +T V+PREVVK AL NAAA+ LAHNHPSGE PS+AD+ LTQ L L LVD Sbjct: 111 LFRGTLTQTSVYPREVVKGALTRNAAALALAHNHPSGEAEPSRADELLTQTLKSALSLVD 170 Query: 136 IRVPDHLIVGGRQIYSFAEHGLL 158 +R+ DH IV G ++ SFAE GL+ Sbjct: 171 VRIIDHFIVAGDKVVSFAELGLI 193 >UniRef50_A4SUN7 DNA repair protein n=2 Tax=Aeromonas salmonicida subsp. salmonicida A449 RepID=A4SUN7_AERS4 Length = 296 Score = 118 bits (295), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 63/122 (51%), Positives = 79/122 (64%) Query: 36 AFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRA 95 + S V E+L+ A LE E F ++ LDNQ+++I L GTI+ V+PREVVK A Sbjct: 41 SLNSPEMVVEYLKTRFATLEHETFAMILLDNQHRVINAVDLSHGTIDSAAVYPREVVKTA 100 Query: 96 LHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEH 155 L NAAAVILAHNHPSG PS+AD+ +T+RL L LVDIRV DH++V G SFA Sbjct: 101 LKHNAAAVILAHNHPSGVAEPSRADRQITERLQAALDLVDIRVLDHIVVAGENSMSFAVR 160 Query: 156 GL 157 G Sbjct: 161 GF 162 >UniRef50_C7NDB9 DNA repair protein RadC n=4 Tax=Fusobacteriaceae RepID=C7NDB9_LEPBD Length = 240 Score = 117 bits (294), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 51/134 (38%), Positives = 88/134 (65%) Query: 25 ALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRT 84 L + +H ++ TS + +L+ + + E F+VL+L+ QN+L+ E LF GTI+R+ Sbjct: 107 GLYKKIHNKKISITSNIKLLNYLKCSLLKRDIEVFKVLFLNTQNELMKEEELFYGTIDRS 166 Query: 85 EVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIV 144 ++ RE++K+ L +NA +VIL HNHP+G PS +D LT+++ +V + ++IR+ DHLI+ Sbjct: 167 TIYIRELIKKILEYNAKSVILVHNHPAGSLKPSDSDILLTKKVKEVFESMEIRLLDHLII 226 Query: 145 GGRQIYSFAEHGLL 158 + +SF E G+L Sbjct: 227 SEQGYFSFLEGGIL 240 >UniRef50_B4S9N8 DNA repair protein RadC n=1 Tax=Prosthecochloris aestuarii DSM 271 RepID=B4S9N8_PROA2 Length = 165 Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 55/113 (48%), Positives = 77/113 (68%) Query: 46 WLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVIL 105 + ++ + EEF LYLD +N++I E + GT+N + VHPREV K A NA +++L Sbjct: 53 FCKIGLQDKASEEFYALYLDTKNKIIGLEMISRGTLNASLVHPREVFKGAFLANANSIML 112 Query: 106 AHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 AHNHPSG T PS ADK +T RLV+ +L+D++V DH+IVG + YSF E GL+ Sbjct: 113 AHNHPSGNTEPSSADKLVTSRLVKAGKLLDLQVLDHIIVGDKGYYSFRESGLI 165 >UniRef50_A1B4F1 UPF0758 protein Pden_2304 n=44 Tax=Alphaproteobacteria RepID=Y2304_PARDP Length = 263 Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 66/152 (43%), Positives = 95/152 (62%), Gaps = 4/152 (2%) Query: 9 GEMTPQDRRLIQRALRALDRH--LHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDN 66 G Q+ ++++ A + L R +H P TS A+ ++ MA E E+FRVLYLD Sbjct: 114 GPAVLQELKIVEAAAQRLARSRVMHRP--VLTSWDALLDYCHTAMAHGEIEQFRVLYLDR 171 Query: 67 QNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQR 126 +N LIA E GT++ V+PRE+++RAL +A+A+IL HNHPSG+ TPSQAD +T R Sbjct: 172 KNVLIADEEQARGTVDHVPVYPREIMRRALELSASALILVHNHPSGDPTPSQADIGMTNR 231 Query: 127 LVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +V +++ I V DHLI+G + SF GLL Sbjct: 232 IVAAAEVMGIAVHDHLIIGRSRELSFRSEGLL 263 >UniRef50_B4X5D3 DNA repair protein RadC n=4 Tax=Alcanivorax sp. DG881 RepID=B4X5D3_9GAMM Length = 164 Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 57/123 (46%), Positives = 84/123 (68%) Query: 36 AFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRA 95 A T+ V ++L++ +A + E F ++L+N++++++ E LF+GTI+ V+PR VV++A Sbjct: 42 ALTAPTDVAQFLQMALAQEKNEVFAAIFLNNKHKVLSFEPLFSGTIDGAAVYPRVVVQQA 101 Query: 96 LHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEH 155 L NAAAVI AHNHPSG PSQAD+T+T RL L L+D+RV DH +V + S AE Sbjct: 102 LACNAAAVIFAHNHPSGCCEPSQADRTITTRLKDALALIDVRVLDHFVVSRSEWVSLAER 161 Query: 156 GLL 158 G L Sbjct: 162 GWL 164 >UniRef50_Q2J299 UPF0758 protein RPB_0700 n=15 Tax=Alphaproteobacteria RepID=Y700_RHOP2 Length = 250 Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 61/145 (42%), Positives = 94/145 (64%), Gaps = 1/145 (0%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 ++++S L GE + +L+ A + + + +S AV ++ R MA +RE+FR Sbjct: 94 LREVSGL-GEAAITEIKLVAAAAARVTKGQVKSRTVLSSWSAVIDYCRTTMAFADREQFR 152 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 +L+LD +NQLIA E GT++ T V+PRE+VKRAL +A AVI+ HNHPSG+ TPSQAD Sbjct: 153 ILFLDKRNQLIADELQQVGTVDHTPVYPREIVKRALELSATAVIMVHNHPSGDPTPSQAD 212 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVG 145 +T+ +V + + + + V DH+IVG Sbjct: 213 IQMTKTIVAIAEPLGVAVHDHIIVG 237 >UniRef50_B1JAY7 DNA repair protein RadC n=4 Tax=Pseudomonas RepID=B1JAY7_PSEPW Length = 164 Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 65/142 (45%), Positives = 92/142 (64%), Gaps = 2/142 (1%) Query: 18 LIQRALRALD-RHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETL 76 LI AL+ LD RH V T A +L+L +A E F +L LD+++++++ + L Sbjct: 24 LITGALQLLDQRHFQRGEVLITPADAA-AYLKLQLAPYHHEVFALLCLDSRHRVLSFDIL 82 Query: 77 FTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDI 136 FTG+I+ V+PR+VV +AL NAAAVI +HNHPSG + PS AD+ LT RL + L LV++ Sbjct: 83 FTGSIDGASVYPRQVVIKALERNAAAVIFSHNHPSGCSEPSGADRVLTTRLTEALALVEV 142 Query: 137 RVPDHLIVGGRQIYSFAEHGLL 158 RV DH+IVG S AE+G + Sbjct: 143 RVLDHIIVGEGTPLSLAEYGWM 164 >UniRef50_Q5WTW4 UPF0758 protein lpl2409 n=6 Tax=Legionella RepID=Y2409_LEGPL Length = 227 Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 55/122 (45%), Positives = 83/122 (68%), Gaps = 1/122 (0%) Query: 35 VAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKR 94 + ++T +L+ + + E F L+LDNQ+++IA+E LF+GTIN V+PR +V+R Sbjct: 101 IRLSNTQQTYAFLKKRLRDYKNETFAALFLDNQHRIIAYEELFSGTINTATVYPRPIVER 160 Query: 95 ALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYS-FA 153 L NAAA+ILAHNHPSG + SQ D +T+R+ L LVD R+ DH+++G ++YS FA Sbjct: 161 VLQLNAAALILAHNHPSGLSDASQQDLAITERIRDALDLVDARLLDHIVIGDNEVYSIFA 220 Query: 154 EH 155 E+ Sbjct: 221 EN 222 >UniRef50_A1K759 DNA repair protein n=2 Tax=Rhodocyclaceae RepID=A1K759_AZOSB Length = 196 Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 62/129 (48%), Positives = 79/129 (61%), Gaps = 7/129 (5%) Query: 30 LHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPR 89 L PGV VR++LR E F VLYLD QN+LI E F GT+ +T V+PR Sbjct: 75 LDSPGV-------VRQFLRTFFEGKPYEIFVVLYLDAQNRLIRAEEAFRGTLTQTSVYPR 127 Query: 90 EVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQI 149 E+++R+L +AA VI +H HPSG PS AD+ LT L L LVD+RV DH++V G + Sbjct: 128 EILRRSLELHAAGVIFSHQHPSGVCEPSSADEVLTNMLKSALTLVDVRVLDHIVVAGDRA 187 Query: 150 YSFAEHGLL 158 SFAE G L Sbjct: 188 VSFAETGRL 196 >UniRef50_Q31EB6 UPF0758 protein Tcr_1917 n=5 Tax=Gammaproteobacteria RepID=Y1917_THICR Length = 225 Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 65/129 (50%), Positives = 84/129 (65%), Gaps = 3/129 (2%) Query: 32 EPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREV 91 + G A T V L+ H+ RE F ++ LD QNQ I LFTGTIN+ VH REV Sbjct: 98 KKGEALTQPEKVARLLQHHIGHQSREIFGLVLLDQQNQFIQFVPLFTGTINQATVHIREV 157 Query: 92 VKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVG--GRQI 149 +K L +AAAVILAHNHPSG+ TPSQ+D+ LT ++ Q LQL++ R DH+I+G GR Sbjct: 158 LKTVLDHHAAAVILAHNHPSGDPTPSQSDRDLTHQIQQGLQLIETRCLDHIILGDHGR-W 216 Query: 150 YSFAEHGLL 158 YSF + G+L Sbjct: 217 YSFTQQGIL 225 >UniRef50_UPI0000E0FF1E DNA repair protein RadC n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0FF1E Length = 213 Score = 115 bits (288), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 54/103 (52%), Positives = 73/103 (70%) Query: 56 REEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETT 115 +E F V L+NQ++ + ++ LF+GTIN V+PRE+VK AL +NAA VILAHNHPSG Sbjct: 110 QERFAVALLNNQHEFLHYKELFSGTINAASVYPREIVKYALDYNAANVILAHNHPSGTPE 169 Query: 116 PSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 PSQAD +TQR+ Q L L+D++V DH++VG S A+ G L Sbjct: 170 PSQADIAITQRIRQALDLIDVQVLDHIVVGAGNAVSLAQRGCL 212 >UniRef50_B8KU95 DNA repair protein RadC n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KU95_9GAMM Length = 223 Score = 112 bits (279), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 59/120 (49%), Positives = 74/120 (61%) Query: 37 FTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRAL 96 S R +L+ + RE F LYLD++N+LI E LF GTI+ V PREVV+ AL Sbjct: 102 IASAVECRRFLQRRLGKQRREVFSALYLDSRNRLIVAEDLFAGTIDGAAVFPREVVRGAL 161 Query: 97 HFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHG 156 +AA+VI+AHNHPSG PS+ D+ LT+RL L LVDIR+ DH IVG S A G Sbjct: 162 LHDAASVIVAHNHPSGALAPSEQDRQLTRRLSSALSLVDIRLLDHFIVGFGDSVSLASLG 221 >UniRef50_A9IU27 UPF0758 protein Bpet3149 n=5 Tax=Bordetella RepID=Y3149_BORPD Length = 225 Score = 112 bits (279), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 59/123 (47%), Positives = 77/123 (62%) Query: 36 AFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRA 95 A + +V+ + + +A E LYLD+Q LI L GT+ R V+PREVV+ A Sbjct: 103 AMSEPGSVKRYFKTALANCAVEHCLALYLDSQLNLITSGELARGTLARASVYPREVVREA 162 Query: 96 LHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEH 155 L +AAA+ILAHNHPSG PSQAD+ T+ + Q L LV+IR+ DHLIV G + S AE Sbjct: 163 LRHHAAALILAHNHPSGSAQPSQADRDFTRHMQQALALVEIRLLDHLIVAGDTVVSMAEL 222 Query: 156 GLL 158 GLL Sbjct: 223 GLL 225 >UniRef50_Q2LSS5 DNA repair protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LSS5_SYNAS Length = 308 Score = 112 bits (279), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 52/121 (42%), Positives = 80/121 (66%) Query: 38 TSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALH 97 + T + ++ + + L+ E F VLYLD QN++IA ET+ G +N+ V+PR+V++RAL Sbjct: 186 SCTGELLDFCKTALGGLKDENFCVLYLDTQNRIIAFETIQKGIVNQAVVYPRQVIERALS 245 Query: 98 FNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGL 157 ++A+IL HNHPSG PS AD LT+ + +L+DI V DHLI+G + +SF E G+ Sbjct: 246 HKSSALILVHNHPSGFVKPSDADIRLTRTITDTAKLLDIMVHDHLIIGENRFFSFREEGI 305 Query: 158 L 158 + Sbjct: 306 M 306 >UniRef50_A8R890 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8R890_9FIRM Length = 227 Score = 111 bits (278), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 50/123 (40%), Positives = 77/123 (62%) Query: 36 AFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRA 95 A +S + EWL + ++E F V++L+ +NQ++A++TLF GT+ VHPRE+ K A Sbjct: 102 AISSPQKLSEWLMQQIGFQQQEHFLVVFLNQRNQILAYKTLFVGTLTSANVHPREIFKEA 161 Query: 96 LHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEH 155 + A +I AHNHPSG S AD +TQ++++ QLV I + DH++VGG + S E Sbjct: 162 MRIGCAKIICAHNHPSGNPQVSDADIAITQQIMECGQLVSIPLLDHIVVGGNRYVSLREE 221 Query: 156 GLL 158 G + Sbjct: 222 GYM 224 >UniRef50_C2E2B4 DNA repair protein RadC n=8 Tax=Lactobacillus jensenii RepID=C2E2B4_9LACO Length = 207 Score = 111 bits (277), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 48/124 (38%), Positives = 79/124 (63%) Query: 35 VAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKR 94 + F S+H V ++L +E+E+ V+YLDN+N+++ LF GT+NR+ VHPR++ + Sbjct: 84 IQFVSSHEVGKYLIDRFLGVEQEQLVVIYLDNKNKVLGERLLFQGTVNRSVVHPRDIFRW 143 Query: 95 ALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAE 154 A+ +N+ +++AHNHPSG+ PSQ D T+++ + L+ I DH+IV R SF E Sbjct: 144 AVFYNSVGILIAHNHPSGDANPSQKDIEFTKQINKASDLMGINFLDHIIVADRSYLSFKE 203 Query: 155 HGLL 158 L+ Sbjct: 204 EQLI 207 >UniRef50_Q5DY97 DNA repair protein RadC n=17 Tax=Proteobacteria RepID=Q5DY97_VIBF1 Length = 165 Score = 111 bits (277), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 52/104 (50%), Positives = 71/104 (68%) Query: 55 EREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGET 114 ERE F +L LDNQ++LI G+I+ V+PREV+K LH+NAAAVI AHNHPSG Sbjct: 62 EREVFAILMLDNQHRLIKFVEHSVGSISSASVYPREVLKSVLHYNAAAVIFAHNHPSGVA 121 Query: 115 TPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 PS AD+ +T RL L+L+D++V DH ++G + SFA+ G + Sbjct: 122 EPSDADRRITARLSSALELIDVKVLDHFVIGVGETVSFAKRGWI 165 >UniRef50_B9Y7M6 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y7M6_9FIRM Length = 228 Score = 111 bits (277), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 54/117 (46%), Positives = 76/117 (64%) Query: 42 AVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAA 101 A+ WL + ++E F +YLD +N ++ H LF GT++ + VHPREV K AL +A Sbjct: 111 ALMAWLGREIGGKQQEHFLAIYLDAKNHILEHRLLFKGTLDASIVHPREVFKEALLASAC 170 Query: 102 AVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 V++ HNHPS + TPS AD+ +TQRL + +L+ I + DHLIVG Q +SF HGLL Sbjct: 171 RVLVVHNHPSQDLTPSLADRIITQRLKETGELIGIELLDHLIVGTTQYFSFRAHGLL 227 >UniRef50_C9NPT2 DNA repair protein RadC n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NPT2_9VIBR Length = 224 Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 59/151 (39%), Positives = 88/151 (58%), Gaps = 3/151 (1%) Query: 10 EMTPQDRRLIQRALRALDRHL--HEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQ 67 + D+ ++Q A + R+ P V + + V+ + + H+A ++RE F L+LDN Sbjct: 75 SFSAHDQAVLQEAKDIIARYWAARSPNV-LNAPNLVKMYCQCHLAHVDREVFGALWLDNG 133 Query: 68 NQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRL 127 + + LF G++N VH REV++ L NAAAVI HNHPSG+ +PSQAD+ LT L Sbjct: 134 LRALGTVDLFAGSLNHAAVHTREVLRSGLRLNAAAVIFYHNHPSGDPSPSQADRQLTNHL 193 Query: 128 VQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 VL ++IRV DH++V + SFAE G Sbjct: 194 KDVLGQIEIRVLDHMVVSLSGVVSFAERGWC 224 >UniRef50_A1UT15 DNA repair protein, RadC family n=3 Tax=Bartonella RepID=A1UT15_BARBK Length = 265 Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 54/116 (46%), Positives = 76/116 (65%) Query: 37 FTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRAL 96 F+S V + + MA RE+FR+L+LD ++ L++ E TGTI+RT V+PREVV RAL Sbjct: 144 FSSWDKVLAYCKAVMAHETREQFRILFLDKKHGLLSDEVQQTGTIDRTPVYPREVVSRAL 203 Query: 97 HFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSF 152 +A+ +IL HNHPSG+ +PSQ D ++T RL V +DI + DHLI+ SF Sbjct: 204 ELSASGIILVHNHPSGDASPSQEDISMTYRLKDVANALDITLHDHLIIARNDYISF 259 >UniRef50_Q1RK76 DNA repair protein RadC n=11 Tax=Rickettsia RepID=Q1RK76_RICBR Length = 249 Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 93/143 (65%), Gaps = 4/143 (2%) Query: 16 RRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHET 75 R LI RAL+ + +++ +A S ++ ++L+++M + E+FRVL+L+ +N LIA E Sbjct: 111 RELINRALKQ--KIINKNIIA--SWGSLIDYLKVNMGNMRLEQFRVLFLNKKNILIADEV 166 Query: 76 LFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVD 135 L GTI++ V+PRE++KRAL A+ +IL HNHPSG PS+A +T +V + + ++ Sbjct: 167 LSQGTIDQAAVYPREIIKRALFNEASNIILVHNHPSGSPDPSKAGIDMTNIIVDMCKTIN 226 Query: 136 IRVPDHLIVGGRQIYSFAEHGLL 158 I V DH+I+ + +SF + LL Sbjct: 227 IIVHDHVIISNNKYFSFKSNMLL 249 >UniRef50_C5SK46 DNA repair protein RadC n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SK46_9CAUL Length = 244 Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 58/150 (38%), Positives = 89/150 (59%), Gaps = 3/150 (2%) Query: 10 EMTPQDRRLIQRALRALDRHLHEP---GVAFTSTHAVREWLRLHMAALEREEFRVLYLDN 66 +MTP +Q A R + EP +S A+ +LR+ +A RE+FR+L+LD Sbjct: 93 KMTPDIALDLQLMFEATRRLMAEPLKRSTVISSWQALLSYLRVTLAHEPREQFRLLFLDK 152 Query: 67 QNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQR 126 +NQLIA E + GT++ +PRE+++RAL +A++VIL HNHPSG+ PSQ D +T+ Sbjct: 153 KNQLIADEIMNYGTVDHAPAYPREIMRRALELSASSVILVHNHPSGDPMPSQGDIDMTKA 212 Query: 127 LVQVLQLVDIRVPDHLIVGGRQIYSFAEHG 156 + + + I + DHLIVG + S + G Sbjct: 213 NIAAGKPLKIAIHDHLIVGREGVLSMKQVG 242 >UniRef50_D2BJ47 DNA repair protein n=5 Tax=Dehalococcoides RepID=D2BJ47_DEHSV Length = 275 Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 59/151 (39%), Positives = 91/151 (60%), Gaps = 2/151 (1%) Query: 9 GEMTPQDRRLIQR-ALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQ 67 GE+ LI+ + R L + E V T+ V ++L M L++E F+V+YLD+Q Sbjct: 93 GEVNSMALTLIREVSRRYLKDGIMEKPVCNTAQQ-VFDYLYCAMRGLKKEVFKVIYLDSQ 151 Query: 68 NQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRL 127 ++++ LFTGT+ + PREV+ A+ NA+A+I HNHPSG+ PSQADK +T+ L Sbjct: 152 HRVLELADLFTGTVASGSIVPREVIAAAISQNASALIFVHNHPSGKIEPSQADKDVTREL 211 Query: 128 VQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 V ++ IR DH+I+G +SFA G++ Sbjct: 212 VYAAMVMKIRALDHIIIGDNCYFSFAAAGIM 242 >UniRef50_UPI0001BC61BD DNA repair protein radC n=3 Tax=Fusobacterium RepID=UPI0001BC61BD Length = 227 Score = 108 bits (271), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 48/113 (42%), Positives = 75/113 (66%) Query: 46 WLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVIL 105 ++R + RE+F VL+L+ NQL+ E LF G+I+R+ V+PRE++++ L + A +VI Sbjct: 115 YVRAQIGFENREKFFVLFLNTANQLLCSEELFQGSIDRSAVYPREILEKVLKYKAKSVIF 174 Query: 106 AHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 AHNHPSG T PS+ D LT+ + L++ D+ + +H+IV +SF E GLL Sbjct: 175 AHNHPSGNTQPSRQDIALTKEMKDALRMFDVLLIEHIIVSKHSYFSFLEEGLL 227 >UniRef50_Q02HM7 Putative uncharacterized protein n=1 Tax=Pseudomonas aeruginosa UCBPP-PA14 RepID=Q02HM7_PSEAB Length = 202 Score = 108 bits (270), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 59/141 (41%), Positives = 82/141 (58%), Gaps = 5/141 (3%) Query: 18 LIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLF 77 L+QRA+ L+R + G S +R++LRL + E F ++LD Q LF Sbjct: 67 LVQRAIAVLERRMFRRGQELLSPRGLRQYLRLRLVGKSEEVFAAVFLDAQ-----WRALF 121 Query: 78 TGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIR 137 GT+N ++ R VVKRAL NA V++AHNHPSG TPSQAD T++L L LVDI Sbjct: 122 RGTVNAAPMYARVVVKRALRHNAVGVVVAHNHPSGLATPSQADIAATRQLKAALNLVDIE 181 Query: 138 VPDHLIVGGRQIYSFAEHGLL 158 + DH ++G + +SF + LL Sbjct: 182 LLDHFVIGRGEPFSFFDAQLL 202 >UniRef50_Q4QPE3 Putative DNA repair radC-like protein n=5 Tax=Haemophilus influenzae RepID=Q4QPE3_HAEI8 Length = 156 Score = 108 bits (269), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 48/132 (36%), Positives = 82/132 (62%) Query: 27 DRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEV 86 ++ ++ FT + + + + ERE F VL+LD ++LI E +F G+++ T V Sbjct: 25 EKPFYQGAQEFTEPSIAKLYFQTIIGNEERENFVVLFLDRIHRLIKSEVMFQGSVSETSV 84 Query: 87 HPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGG 146 RE++++AL NA+A+I+ HNHP+G PS ADK +T+RL + +L+DI++ DH IV G Sbjct: 85 SIREIIRQALKLNASAIIIGHNHPTGNVEPSDADKYITKRLKEACELMDIKLLDHFIVSG 144 Query: 147 RQIYSFAEHGLL 158 + F ++ L+ Sbjct: 145 SASFCFTDNHLI 156 >UniRef50_Q0BRK0 DNA repair protein radC n=5 Tax=Alphaproteobacteria RepID=Q0BRK0_GRABC Length = 271 Score = 108 bits (269), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 55/113 (48%), Positives = 77/113 (68%) Query: 46 WLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVIL 105 +L +A + E+FRVL+LDN+NQLIA E L GT+N V+PREVVKRAL +A A+I+ Sbjct: 159 YLNASLAREKNEQFRVLFLDNRNQLIADEILAHGTVNHAPVYPREVVKRALELHATALIV 218 Query: 106 AHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 HNHPSG+ TPS D +T+ L + +L+ + + DH+I+G SF + GLL Sbjct: 219 VHNHPSGDPTPSAEDIRMTRELREAGRLLSLDLHDHVIIGRHGWSSFRKQGLL 271 >UniRef50_A0Z2T6 DNA repair protein RadC n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z2T6_9GAMM Length = 223 Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 57/128 (44%), Positives = 75/128 (58%), Gaps = 7/128 (5%) Query: 30 LHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPR 89 L +PG + ++L+ H RE F L+LD Q QL+A +F GT+N V+PR Sbjct: 99 LKDPGSCY-------KYLQHHYLLQSREVFTCLFLDTQRQLLACRDMFFGTLNTAPVYPR 151 Query: 90 EVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQI 149 E+V AL A+A+I+AHNHPSG PS AD LT RL + L L+DI + DHLIV + Sbjct: 152 EIVAMALKMGASAIIVAHNHPSGCLAPSVADIQLTDRLRRALGLIDIDLLDHLIVAQGRY 211 Query: 150 YSFAEHGL 157 S A GL Sbjct: 212 LSMASEGL 219 >UniRef50_UPI000196B4AA hypothetical protein CATMIT_00107 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B4AA Length = 226 Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 46/106 (43%), Positives = 72/106 (67%) Query: 47 LRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILA 106 L M+ L +E F ++ LDN N+LIA +TLF G++N + V RE+ + AL FN ++I Sbjct: 111 LETKMSHLSQEHFLIMILDNHNRLIAEKTLFIGSVNMSIVSAREIFREALAFNGVSIICV 170 Query: 107 HNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSF 152 HNHPSG+ PS D ++TQ+LV + +++++ + DH+I+G Q YSF Sbjct: 171 HNHPSGDAHPSSEDISMTQKLVDLGKMMNVDIVDHIIIGRNQYYSF 216 >UniRef50_B1C9I2 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C9I2_9FIRM Length = 224 Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 51/122 (41%), Positives = 77/122 (63%) Query: 37 FTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRAL 96 T + + L M+ L+ E F+V+ L+ +N +I E + GTIN + VH REV + A+ Sbjct: 103 ITCVMDIVDLLSYDMSFLDEEHFKVILLNTKNMVIETELISIGTINTSLVHVREVFRNAI 162 Query: 97 HFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHG 156 NA ++ILAHNHPSG++TPS D+ LT+RL +L+ I+V DH+I+G +SF E Sbjct: 163 KKNANSIILAHNHPSGDSTPSIEDEHLTKRLKDAGELIGIKVIDHVIIGKDNYFSFMEEN 222 Query: 157 LL 158 +L Sbjct: 223 ML 224 >UniRef50_C0Q9Z9 RadC3 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0Q9Z9_DESAH Length = 279 Score = 106 bits (264), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 55/135 (40%), Positives = 84/135 (62%), Gaps = 3/135 (2%) Query: 27 DRHLHE---PGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINR 83 DR+L + ++H + +L + RE F ++LD +N+++A E LF G+++ Sbjct: 133 DRYLEQRIRSKTVLKNSHDLCAFLGHAIGHRPREVFVGIFLDAKNRVLASEILFEGSLSS 192 Query: 84 TEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLI 143 + V+PREV+ +AL AAA+I AHNHPSGET+PS D +T+RL L I V +HLI Sbjct: 193 SAVYPREVIAKALEHRAAALIFAHNHPSGETSPSPEDLAITRRLFFALAHAGITVHEHLI 252 Query: 144 VGGRQIYSFAEHGLL 158 GG + YSFA+ G++ Sbjct: 253 TGGERFYSFADQGII 267 >UniRef50_C6J5M2 DNA repair protein RadC n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J5M2_9BACL Length = 162 Score = 105 bits (263), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 54/160 (33%), Positives = 90/160 (56%), Gaps = 11/160 (6%) Query: 3 QLSFLPGEMTPQDRRLIQRALRAL----DRHLHEPGVAFTSTHAVREWLRLHMAALEREE 58 QL+ LP Q +L++ + + D ++H P F + + + L++E Sbjct: 10 QLNALPPRRRKQAEKLLELIRKVMEGEKDHYIHTPADVF-------QAVATDLVGLDKEH 62 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 F +L L+ +N++++ E + GT+N VHPREV K A+ AA++I HNHPSG+ PS Sbjct: 63 FMILILNTKNRILSKEVISIGTLNSAIVHPREVFKPAIIKGAASIICVHNHPSGDPAPSS 122 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 DK LT+RL+Q +++ I V DH+++G S E G++ Sbjct: 123 EDKKLTERLIQAGEIIGIDVLDHVVIGTEGYVSLKEQGMI 162 >UniRef50_C7JGI7 DNA repair protein RadC n=8 Tax=Acetobacter pasteurianus RepID=C7JGI7_ACEP3 Length = 249 Score = 105 bits (262), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 55/140 (39%), Positives = 86/140 (61%), Gaps = 7/140 (5%) Query: 19 IQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFT 78 IQRA L G+ ST + +LR M +RE+ RVL+L+++++L+A + + Sbjct: 117 IQRA------RLRRSGILADSTQ-LYAYLRAVMGPEKREQVRVLFLNDKHELLADDVMGQ 169 Query: 79 GTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRV 138 GT++ T V+PRE+V RAL NA ++L HNHPSG+ TPS D +T ++ ++++I V Sbjct: 170 GTVDHTPVYPREIVARALQLNATMLVLVHNHPSGDPTPSADDVVMTTQICGAAKIMNIHV 229 Query: 139 PDHLIVGGRQIYSFAEHGLL 158 DH+IV G ++ S E G L Sbjct: 230 WDHIIVAGEKLLSMREAGFL 249 >UniRef50_A9IEU5 Putative DNA repair protein n=1 Tax=Bordetella petrii DSM 12804 RepID=A9IEU5_BORPD Length = 174 Score = 105 bits (262), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 62/153 (40%), Positives = 91/153 (59%), Gaps = 6/153 (3%) Query: 9 GEMTPQDRR---LIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLD 65 G M P R + R L ++D LH G ++ + +L+L +A LE E ++ LD Sbjct: 25 GAMRPAQRAEILAVARELVSIDT-LH--GEDLSNPDKAKAFLQLRLAGLEHEVCALMLLD 81 Query: 66 NQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQ 125 Q +LI + F GT+++ V+PRE++K AL NAA +++AHNHPSG SQAD+ LTQ Sbjct: 82 VQLRLITYLEPFRGTLSQAPVYPREILKLALRHNAAGLMMAHNHPSGLAEASQADRQLTQ 141 Query: 126 RLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 + Q L L+D+R+ DH IV G + S A+ G L Sbjct: 142 AVQQALALIDVRLLDHFIVAGTTVVSMAQRGQL 174 >UniRef50_C6XNR3 DNA repair protein RadC n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XNR3_HIRBI Length = 272 Score = 105 bits (261), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 51/102 (50%), Positives = 72/102 (70%) Query: 57 EEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTP 116 E+FRVL+LD++NQLIA E GTIN V+PRE+ KRAL +A+A+IL HNHPSG+ TP Sbjct: 171 EQFRVLFLDHKNQLIADERQSQGTINHAPVYPRELAKRALELSASALILVHNHPSGDPTP 230 Query: 117 SQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 S+AD +T+ ++ + ++I + DHLIVG + I S L+ Sbjct: 231 SRADIDVTREIMDAFEPLEITIHDHLIVGKKGITSLKAKNLI 272 >UniRef50_Q3A6E7 DNA repair protein, RadC-like n=3 Tax=Desulfuromonadales RepID=Q3A6E7_PELCD Length = 166 Score = 104 bits (260), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 56/123 (45%), Positives = 81/123 (65%), Gaps = 2/123 (1%) Query: 36 AFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRA 95 AFTS V E L + A +E F L+LDN+N+L+ + + G+++ + VHPREV K A Sbjct: 46 AFTSPRKVAEMLAF-LKAESKEYFMALHLDNKNRLLCLDRVSVGSLSASIVHPREVFKSA 104 Query: 96 LHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEH 155 L +AA ++L HNHPSG+T PS D+ +T RLV+ +++ I V DH+I+G +SFAE Sbjct: 105 LLSSAAGLVLVHNHPSGQTEPSHEDEEVTTRLVKAGEMLGIHVLDHIILGD-GFFSFAEQ 163 Query: 156 GLL 158 GLL Sbjct: 164 GLL 166 >UniRef50_C1SJ65 DNA repair protein radc n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SJ65_9BACT Length = 221 Score = 104 bits (259), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 46/108 (42%), Positives = 72/108 (66%) Query: 45 EWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVI 104 ++L+ +A ++E F L+LD +L+ E LF GT++R V+PRE+ +RA+ A VI Sbjct: 108 QFLKYKIAYDKKEHFVALFLDVNKKLLGFENLFKGTVDRLAVYPREIAERAITSKATHVI 167 Query: 105 LAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSF 152 +AHNHPSG +PS+ D TLT +L++ L +DI + DH+I+ + YSF Sbjct: 168 VAHNHPSGNMSPSETDITLTDKLIKALAALDINLADHIIITTKGFYSF 215 >UniRef50_C0BM81 DNA repair protein RadC n=2 Tax=Bacteroidetes RepID=C0BM81_9BACT Length = 231 Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 52/124 (41%), Positives = 78/124 (62%) Query: 35 VAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKR 94 ++ +S+ A L+ + L EEF VLYLDN N LI L G T V R V+++ Sbjct: 108 LSLSSSGAAFSILKPVLIGLTYEEFWVLYLDNSNVLIERSLLGKGGFTATVVDIRLVLQQ 167 Query: 95 ALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAE 154 A+ + A A+I+AHNHP+G PS +DK LTQ+L + +++DI++ DH+IVG + +SFA+ Sbjct: 168 AIRWGATAMIVAHNHPTGNLKPSHSDKALTQKLKEAAKVLDIKLLDHIIVGKNEYFSFAD 227 Query: 155 HGLL 158 LL Sbjct: 228 QNLL 231 >UniRef50_Q5FNC4 DNA repair protein RadC n=1 Tax=Gluconobacter oxydans RepID=Q5FNC4_GLUOX Length = 216 Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 58/158 (36%), Positives = 91/158 (57%), Gaps = 1/158 (0%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 ++ +S + M P R L + ALR +R P + + ++L +A E+FR Sbjct: 60 LESISDMGMHMLPMIRVLQEAALR-YNRARLPPEDVLDNEQKLLDYLTARLARENIEQFR 118 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 +L+L+ +N LIA E GT+N T V+PREV +RA+ A A++L HNHPSG+ TPS+AD Sbjct: 119 ILFLNEKNSLIADEAQARGTVNHTPVYPREVARRAVEIGATALVLVHNHPSGDPTPSEAD 178 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +T ++ L++V + + DH I+G + SF LL Sbjct: 179 LQMTMQVQAALEVVGVTIADHFIIGNGRHTSFRRSNLL 216 >UniRef50_A4J365 DNA repair protein RadC n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J365_DESRM Length = 231 Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 47/105 (44%), Positives = 73/105 (69%) Query: 54 LEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGE 113 L++E F L L+ +N +I ET+ GT+N + VHPRE+ K+A+ +AAAVIL HNHPSG+ Sbjct: 127 LDKEYFSALLLNTKNHVIGKETISIGTLNSSMVHPRELFKQAIRRSAAAVILVHNHPSGD 186 Query: 114 TTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 TPS+ D +LT+RL++ +++ I V DH+++G + S GL+ Sbjct: 187 PTPSREDISLTKRLIEAGEIIGIDVLDHIVLGFDKFTSLKSKGLI 231 >UniRef50_D2MNQ5 Putative DNA repair protein RadC n=1 Tax=Bulleidia extructa W1219 RepID=D2MNQ5_9FIRM Length = 223 Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 45/113 (39%), Positives = 75/113 (66%) Query: 45 EWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVI 104 +WL+ + +E+F V++L + ++++++ LF GTIN + V PRE+ K AL N+ +I Sbjct: 110 DWLKQEIGTSLQEKFLVVFLASDQRVLSYKILFVGTINASMVFPREIFKEALLLNSPNII 169 Query: 105 LAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGL 157 L HNHPSG +PSQ D +LT+R+ + QL+ ++V DH+IV +SF + G+ Sbjct: 170 LVHNHPSGNLSPSQEDISLTKRIKEAGQLMGVKVLDHIIVTQSDYFSFVQEGI 222 >UniRef50_Q04B84 DNA repair protein n=2 Tax=Lactobacillus delbrueckii subsp. bulgaricus RepID=Q04B84_LACDB Length = 204 Score = 102 bits (254), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 54/156 (34%), Positives = 84/156 (53%), Gaps = 1/156 (0%) Query: 4 LSFLPGEMTPQDRRL-IQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVL 62 L + G P D L I+ A+ L R + + + +L + ++E+F VL Sbjct: 49 LDYASGPDCPNDLSLTIEVAMDRLRRTDMRRSSDWAGSSKIGNYLANKLLGQKQEQFWVL 108 Query: 63 YLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKT 122 Y D Q L+ + LF GT++R+ VHPRE+ + A+ + A++I+AHNHPSG TPS D Sbjct: 109 YFDQQQNLLGEKMLFQGTLDRSWVHPREIFRWAVVYGCASIIVAHNHPSGALTPSDNDLE 168 Query: 123 LTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 LT+ L + +++ I DH I+GG + S E L Sbjct: 169 LTKGLKKASKIMKITFLDHFIIGGGEYLSLRERELF 204 >UniRef50_C7RDS9 DNA repair protein RadC n=3 Tax=Anaerococcus RepID=C7RDS9_ANAPD Length = 228 Score = 102 bits (254), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 50/135 (37%), Positives = 80/135 (59%), Gaps = 4/135 (2%) Query: 24 RALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINR 83 R LD+ + + TS+ V + + ++ L++E F + LD++N +IA E + G + Sbjct: 98 RVLDKKIEK----ITSSKDVYDIMSPRLSNLKKEYFYAILLDSKNVIIAKEVISIGDLGS 153 Query: 84 TEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLI 143 T V+PREV K A+ +A ++IL HNHPSG PS D +T RL + ++DI+V DH++ Sbjct: 154 TVVNPREVFKPAIKKSAKSMILVHNHPSGNPKPSTEDFLITDRLAEAGDILDIKVLDHIV 213 Query: 144 VGGRQIYSFAEHGLL 158 +G YSF + G L Sbjct: 214 IGNSSYYSFKKEGNL 228 >UniRef50_Q2QJL1 DNA repair protein RadC n=1 Tax=Acetobacter aceti RepID=Q2QJL1_ACEAC Length = 147 Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 47/113 (41%), Positives = 74/113 (65%) Query: 46 WLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVIL 105 +LR M +RE+ RVL+L++Q+QL+A + + GT++ T V+PRE+V RAL A ++L Sbjct: 35 YLRAIMGPEKREQVRVLFLNDQHQLLADDIMGQGTVDHTPVYPREIVARALQLKATLLVL 94 Query: 106 AHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 HNHPSG+ TPS D +T ++ ++++I V DH+IV G ++ E G L Sbjct: 95 VHNHPSGDPTPSADDVVMTNQICGAAKIMNIHVWDHIIVAGEKLLCMREAGFL 147 >UniRef50_A9HJN5 DNA repair protein RadC n=1 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=A9HJN5_GLUDA Length = 221 Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 53/125 (42%), Positives = 78/125 (62%) Query: 34 GVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVK 93 G + A+ +L+ +A E+FRVL+LD +LIA E L GTI++T V+PREV++ Sbjct: 97 GDLLSCHDALMAYLQASLARDTVEQFRVLFLDRGTRLIADEVLAQGTIDQTPVYPREVMR 156 Query: 94 RALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFA 153 RA+ A+ +IL HNHP TPS+ D +T+RL Q+ ++ + V DH+IVG SF Sbjct: 157 RAIQLKASELILVHNHPGWNPTPSREDIAMTRRLAQIATVLGLTVRDHVIVGNGASISFR 216 Query: 154 EHGLL 158 + GLL Sbjct: 217 QAGLL 221 >UniRef50_Q1AVT6 UPF0758 protein Rxyl_1530 n=3 Tax=Bacteria RepID=Y1530_RUBXD Length = 227 Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 55/127 (43%), Positives = 81/127 (63%), Gaps = 2/127 (1%) Query: 33 PGVAFTSTHA-VREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREV 91 PG S+ A V LR +A L+RE F V+ L+ +N++I T+ GT++ + VHPREV Sbjct: 102 PGRPVISSPADVDGLLRGRIANLDREHFVVVLLNTKNEVIEAPTISVGTLSSSLVHPREV 161 Query: 92 VKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYS 151 K A+ +AA+V+LAHNHPSG PS+ D+ +T R+ + ++ I V DH+IV G +S Sbjct: 162 FKPAIRASAASVVLAHNHPSGRVEPSREDREVTGRVAEAGGIIGIEVLDHVIV-GEGYFS 220 Query: 152 FAEHGLL 158 EHG+L Sbjct: 221 MKEHGML 227 >UniRef50_A9I305 DNA repair protein radC homolog n=3 Tax=Proteobacteria RepID=A9I305_BORPD Length = 177 Score = 102 bits (253), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 50/116 (43%), Positives = 77/116 (66%) Query: 41 HAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNA 100 +AV+ + + ++ + E VLYL++Q ++I + + GT+ + V+PRE+VK AL +A Sbjct: 60 NAVKHYFQAKLSGMGHEVAAVLYLNSQFKVIRYMEMSHGTLTQASVYPREIVKTALRLDA 119 Query: 101 AAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHG 156 AA+I++HNHPSG PS+AD LT+ L L LVD+R+ DH+IV G+ S AE G Sbjct: 120 AAIIMSHNHPSGIPEPSEADLALTRHLKHALALVDVRLVDHIIVTGQNTTSLAERG 175 >UniRef50_D1U9S4 DNA repair protein RadC n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U9S4_9DELT Length = 227 Score = 102 bits (253), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 49/102 (48%), Positives = 69/102 (67%) Query: 57 EEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTP 116 EEF ++D++N++IA E + GT++ T V PRE++ AL AAA+ILAHNHP G+ TP Sbjct: 126 EEFWAAFMDSKNRVIAWEQVSKGTVDATPVFPREIMVTALRLEAAALILAHNHPGGDPTP 185 Query: 117 SQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 S+ D LT+R+ Q + IR+ DH+IV + YSF EHG L Sbjct: 186 SREDLDLTRRIRDTAQGLGIRILDHIIVTDHEYYSFNEHGRL 227 >UniRef50_A9VIS8 UPF0758 protein BcerKBAB4_4299 n=107 Tax=Firmicutes RepID=Y4299_BACWK Length = 225 Score = 101 bits (252), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 47/111 (42%), Positives = 72/111 (64%) Query: 46 WLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVIL 105 ++ M L++E F LYL+ +NQ+I +T+F G++N + VHPREV K A AA++I Sbjct: 113 YMMEEMRFLQQEHFVCLYLNTKNQVIHRQTIFIGSLNTSIVHPREVFKEAFRRAAASIIC 172 Query: 106 AHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHG 156 HNHPSG+ PS+ D +T+RLV+ +++ I V DH+I+G + S E G Sbjct: 173 LHNHPSGDPAPSREDIEVTKRLVECGRIIGIEVLDHIIIGDHKFVSLKEKG 223 >UniRef50_Q8UEZ6 UPF0758 protein Atu1607 n=100 Tax=Alphaproteobacteria RepID=Y1607_AGRT5 Length = 280 Score = 101 bits (252), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 59/148 (39%), Positives = 89/148 (60%), Gaps = 8/148 (5%) Query: 9 GEMTPQDRRLI----QRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYL 64 GE D +L+ QR L++ R+ G S +V ++ MA RE+FR+L+L Sbjct: 131 GEAVALDLKLVASVSQRMLKSEIRNKQVLG----SWSSVIDYCHAAMAHETREQFRILFL 186 Query: 65 DNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLT 124 D +N LIA E GT++ T V+PRE+V+RAL ++ A+IL HNHPSG+ TPS+AD +T Sbjct: 187 DKRNVLIADEVQGQGTVDHTPVYPREIVRRALELSSTALILIHNHPSGDPTPSRADIEMT 246 Query: 125 QRLVQVLQLVDIRVPDHLIVGGRQIYSF 152 + ++ + + I V DH+I+G SF Sbjct: 247 KTIIDTAKPLGITVHDHIIIGKDGHASF 274 >UniRef50_D1VVJ8 DNA repair protein RadC-like protein n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VVJ8_9FIRM Length = 236 Score = 101 bits (251), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 48/122 (39%), Positives = 77/122 (63%) Query: 37 FTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRAL 96 TS +++ M LE E FR++ L+ + ++ + G IN T VHPREV ++A+ Sbjct: 114 ITSPEDAAKYVMASMRDLETEVFRIIILNTKKEIKYIREISHGIINMTVVHPREVFRQAI 173 Query: 97 HFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHG 156 A ++IL HNHP+G+ +PSQ D+ LT+RLV+V ++V I + DH+I+G +SF + G Sbjct: 174 SDGAHSIILLHNHPTGDPSPSQEDRNLTRRLVEVSKIVGIDICDHIIIGDNTFFSFLKEG 233 Query: 157 LL 158 +L Sbjct: 234 IL 235 >UniRef50_Q0AWG3 UPF0758 protein Swol_1642 n=12 Tax=Firmicutes RepID=Y1642_SYNWW Length = 235 Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 51/117 (43%), Positives = 74/117 (63%) Query: 42 AVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAA 101 AVRE M +RE FRVLYLD + LI + + G ++ + VHPREV K A+ +AA Sbjct: 119 AVRELAMEEMRHYDREHFRVLYLDRKGGLITMQDISIGGLHSSIVHPREVFKTAVKKSAA 178 Query: 102 AVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 ++IL HNHPSG+ TPSQ D +T+RL++ +++ I + DH+I+G S GL+ Sbjct: 179 SMILVHNHPSGDPTPSQEDIEITRRLIEAGKIMGIEILDHVIIGEINYCSLKARGLI 235 >UniRef50_B8FHA4 DNA repair protein RadC n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FHA4_DESAA Length = 265 Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 51/124 (41%), Positives = 78/124 (62%), Gaps = 1/124 (0%) Query: 36 AFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRA 95 A +S+ + L + E F ++YLD QN+++ ET F G++N + V+ RE++ +A Sbjct: 127 AVSSSEELYNLLNFQFENKKNECFFIVYLDVQNRILNMETPFEGSLNASHVYTRELIDKA 186 Query: 96 LHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGR-QIYSFAE 154 L A+AV+LAHNHPSG T PS+ D LT L + V+I + +HLI+G + + YSFA+ Sbjct: 187 LKTGASAVLLAHNHPSGNTKPSKNDIQLTYTLFTAFRSVEIHLLEHLIIGKQGEYYSFAD 246 Query: 155 HGLL 158 HG L Sbjct: 247 HGYL 250 >UniRef50_B4CZF8 DNA repair protein RadC n=2 Tax=Verrucomicrobia RepID=B4CZF8_9BACT Length = 231 Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 58/127 (45%), Positives = 79/127 (62%), Gaps = 5/127 (3%) Query: 37 FTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRAL 96 S + + L M AL RE R++ LD + LI E + G++N + HPREV + AL Sbjct: 105 LDSPELINDLLGPEMRALGRESLRLVLLDTKYLLIRVEEISHGSLNESIAHPREVFRPAL 164 Query: 97 HFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVG----GRQIY-S 151 ++A AVIL HNHPSG+ TPS AD LT+RLVQ +L+ IR+ DH+I+G GR Y S Sbjct: 165 IYSAYAVILVHNHPSGDPTPSSADHQLTRRLVQGAELLQIRLLDHVILGTGDNGRLPYFS 224 Query: 152 FAEHGLL 158 F E G++ Sbjct: 225 FKEAGII 231 >UniRef50_Q1WT78 DNA repair protein n=3 Tax=Lactobacillus RepID=Q1WT78_LACS1 Length = 225 Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 54/167 (32%), Positives = 93/167 (55%), Gaps = 9/167 (5%) Query: 1 MKQLSFLPGE----MTPQDRRL-IQRALRAL-DRHLHEPGVAFT---STHAVREWLRLHM 51 + +L F E + D ++ I RALR +R+ + G+ S+ ++ + Sbjct: 57 LNELQFFSDEGLKNLCKDDEKVAIIRALREFSERYKEKEGLVLGQIFSSCMFGNYMIDKI 116 Query: 52 AALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPS 111 ++E + LD +NQ+++ + +F GT+N VHPRE+ K AL+F+ A +++AHNHPS Sbjct: 117 GDSKQELLVCVCLDTKNQVLSEKVIFKGTLNSATVHPREIFKHALNFSCARILVAHNHPS 176 Query: 112 GETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 G PS+ D LT+RL+ +++ I + DH+IVG S AE ++ Sbjct: 177 GNVEPSENDIQLTKRLINAGKMIGIELIDHVIVGSEVYLSLAEEKIV 223 >UniRef50_A5IM26 UPF0758 protein Tpet_1235 n=7 Tax=Thermotogaceae RepID=Y1235_THEP1 Length = 222 Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 47/109 (43%), Positives = 71/109 (65%) Query: 50 HMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNH 109 M LERE +V+ LD + +I TL GT +R+ +HPR+V + A+ NA+ VI+ HNH Sbjct: 114 EMVYLEREIVKVICLDTKLNVIGENTLTVGTSDRSLIHPRDVFRTAIRANASGVIVVHNH 173 Query: 110 PSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 PSG+ TPS+ D+ +T+RL Q +++ + + DH+IV R +SF E G L Sbjct: 174 PSGDPTPSKEDRLITERLKQAGEILGVSLVDHVIVSRRGYFSFREEGEL 222 >UniRef50_Q38XC8 UPF0758 protein LCA_0852 n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=Y852_LACSS Length = 224 Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 50/120 (41%), Positives = 71/120 (59%) Query: 39 STHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHF 98 S+ V + + +A +E+ +YLD +NQ+I + L+ GT+N + HPREV K A+ + Sbjct: 103 SSQMVGQRMIESLAGETQEQLLAVYLDVKNQIIQIKQLYLGTLNSSVAHPREVFKWAVQY 162 Query: 99 NAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +AA IL HNHPSG+ PS D T+R+V QL+ I DHLI+G Q S E G L Sbjct: 163 SAAKFILVHNHPSGQLAPSTQDINFTKRIVNCGQLMGITCLDHLIIGSSQYLSLREEGYL 222 >UniRef50_C0R2T1 DNA repair protein RadC n=7 Tax=Wolbachia RepID=C0R2T1_WOLWR Length = 224 Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 42/114 (36%), Positives = 79/114 (69%) Query: 45 EWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVI 104 ++LR+ + +L +E FRV+Y++ + +LIA + GT+++T ++ RE++KRAL + +++ Sbjct: 111 DYLRISIGSLNKENFRVIYMNKKYRLIAEDLQNIGTVDQTPLYVREIIKRALLIGSTSIV 170 Query: 105 LAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 ++HNHPS +T PS +D +LT++L + Q + I + DH+I+ +SF E+ LL Sbjct: 171 ISHNHPSRDTQPSNSDISLTRQLAEACQSIGIELIDHIIITFSSYFSFKENRLL 224 >UniRef50_B6J212 DNA repair protein n=1 Tax=Coxiella burnetii CbuG_Q212 RepID=B6J212_COXB2 Length = 158 Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 44/81 (54%), Positives = 61/81 (75%) Query: 78 TGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIR 137 + + N+ VHPRE++KRAL+ N+AA+I+AHNHPSG PSQAD+ T L + L L+D+R Sbjct: 78 SKSFNQASVHPREIIKRALYHNSAALIVAHNHPSGVLDPSQADRAATTHLKEALALIDVR 137 Query: 138 VPDHLIVGGRQIYSFAEHGLL 158 + DH+I+G R +SFAE GLL Sbjct: 138 LLDHIIIGDRNSFSFAESGLL 158 >UniRef50_A0L491 DNA repair protein RadC n=4 Tax=Bacteria RepID=A0L491_MAGSM Length = 241 Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 53/116 (45%), Positives = 72/116 (62%) Query: 43 VREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAA 102 VR++L MA E F VL LD Q +L+ + GTI + VHPR+VV+ + AA Sbjct: 120 VRDYLVPLMAGRTEEVFYVLCLDAQCRLLFPALVTEGTIRQAHVHPRQVVELVIRHKAAH 179 Query: 103 VILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 VILAHNHPSG SQ D LT L+Q L +D++V DHLI+ G +++SFA G++ Sbjct: 180 VILAHNHPSGNPKASQDDILLTSHLMQALNPIDVQVLDHLIIAGEKVFSFASAGMM 235 >UniRef50_C6E4Z0 DNA repair protein RadC n=3 Tax=Geobacter RepID=C6E4Z0_GEOSM Length = 167 Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 49/101 (48%), Positives = 72/101 (71%), Gaps = 1/101 (0%) Query: 56 REEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETT 115 +E F L+LD +N+++ + + TG++N++ VHPRE+ K AL +AAAVIL HNHP+G+ T Sbjct: 66 KEHFIALHLDGKNRIVCIDMVSTGSLNQSIVHPRELFKTALLSSAAAVILLHNHPTGDPT 125 Query: 116 PSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHG 156 PS D T+T+RL + +L+ IRV DH+I+G YSF E G Sbjct: 126 PSTEDLTITRRLQEAGELIGIRVLDHIIIGD-NYYSFTERG 165 >UniRef50_C6VI64 DNA repair protein n=3 Tax=Lactobacillus plantarum RepID=C6VI64_LACPJ Length = 211 Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 46/108 (42%), Positives = 69/108 (63%) Query: 51 MAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHP 110 A LE+E+ ++L LD +NQ+I + +F GT+N PRE++K AL A V++AHNHP Sbjct: 98 FANLEQEQLQLLCLDTKNQVIKRQVVFQGTLNSCPAQPREIIKVALTTPTARVVIAHNHP 157 Query: 111 SGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 SG+ TPS+ D T+RL +L+ + + D I+G +SFAE G+L Sbjct: 158 SGDVTPSKKDVEFTKRLQLACELMGLPLLDSFIIGVNDYFSFAEQGVL 205 >UniRef50_C8VVH2 DNA repair protein RadC n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VVH2_DESAS Length = 227 Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 46/113 (40%), Positives = 74/113 (65%) Query: 46 WLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVIL 105 ++ M ++RE F+ L L+ +N++I+ E + GT+N + VHPRE+ K A+ +AAA+IL Sbjct: 115 YVMEEMRYMDREHFKALLLNTKNRVISLEAISVGTLNSSNVHPRELFKVAIKRSAAAIIL 174 Query: 106 AHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 HNHPSG+ TPS+ D +T+RL + ++V I V DH+++G + S GL Sbjct: 175 IHNHPSGDPTPSREDIDVTERLGEAGKIVGIDVLDHIVIGDGKFVSLKAKGLF 227 >UniRef50_C8NZ93 DNA repair protein RadC n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8NZ93_ERYRH Length = 235 Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 47/114 (41%), Positives = 72/114 (63%), Gaps = 2/114 (1%) Query: 33 PG--VAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPRE 90 PG + +S + WL L + E+E FRVL+L QN LI + LF GT +++ VHPR+ Sbjct: 104 PGEKIKLSSCDRIVRWLNLEIGFEEQELFRVLFLSTQNNLIRYLDLFKGTADKSLVHPRD 163 Query: 91 VVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIV 144 V + A+ NA+ ++L HNHP G + S+AD +T+ L++V ++ I V DH+IV Sbjct: 164 VFREAVRCNASRIVLVHNHPGGSLSASEADVEVTRALIEVGMMIGIEVVDHIIV 217 >UniRef50_Q3JV52 UPF0758 protein BURPS1710b_1139 n=75 Tax=Proteobacteria RepID=Y1139_BURP1 Length = 278 Score = 99.4 bits (246), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 56/120 (46%), Positives = 79/120 (65%) Query: 39 STHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHF 98 S AV ++LRL + RE F L+LD +++L+ E G++ R V+PRE+V+RAL Sbjct: 159 SPGAVDDYLRLLIGTRPREVFVCLFLDARHRLVQTEETAHGSLTRMAVYPREIVRRALAL 218 Query: 99 NAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 NAAA+I+AHNHPSG PS AD+ LT+ L L LVDI++ DH +VG +SFA+ G + Sbjct: 219 NAAALIVAHNHPSGAVRPSAADRRLTRVLRDALALVDIKLIDHFVVGASDTFSFAQAGWI 278 >UniRef50_B9MPC4 DNA repair protein RadC n=2 Tax=Clostridia RepID=B9MPC4_ANATD Length = 232 Score = 99.0 bits (245), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 47/120 (39%), Positives = 70/120 (58%) Query: 39 STHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHF 98 + A E+++ + E F V+ LD Q +I LF GT+ V+PR+VV+ + + Sbjct: 108 NVEAAAEYIKSLFVGRKNEVFYVICLDTQLNVIYSVPLFEGTVKEAVVYPRKVVECVIRY 167 Query: 99 NAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 NA++VILAHNHP G PS D TQ++V L + + V DH IV + YSFA++G+L Sbjct: 168 NASSVILAHNHPGGSVRPSMDDIKTTQKIVNALSTIGVAVNDHFIVAKDEYYSFAQNGML 227 >UniRef50_A0R7V6 DNA repair protein RadC n=5 Tax=Desulfuromonadales RepID=A0R7V6_PELPD Length = 168 Score = 99.0 bits (245), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 56/154 (36%), Positives = 89/154 (57%), Gaps = 8/154 (5%) Query: 12 TPQDRRLIQRALRALDRH--LHEPG-----VAFTSTHAVREWLRLHMAALEREEFRVLYL 64 TP +R++ +++ A R + E FTS V E + + +E F L+L Sbjct: 16 TPATKRIVLKSIEARYRKEAVREDAPEWVTTRFTSPKQVFELFK-DLIYETKEHFITLHL 74 Query: 65 DNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLT 124 D +N+++ + + G++N++ VHPREV K AL NAAA+I H HPSG+ PS D ++T Sbjct: 75 DGKNRIMCMDRVSIGSLNQSIVHPREVFKTALLSNAAAIICVHQHPSGDPNPSSEDLSIT 134 Query: 125 QRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +RL + +++ IRV DH++VG SF E GL+ Sbjct: 135 KRLKEAGEIMGIRVLDHIVVGHEDYISFVEKGLM 168 >UniRef50_Q2G8R8 DNA repair protein RadC n=5 Tax=Sphingomonadales RepID=Q2G8R8_NOVAD Length = 245 Score = 99.0 bits (245), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 53/150 (35%), Positives = 89/150 (59%) Query: 9 GEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQN 68 GE + R++ A R L R + ++ A+ ++L + MA L E RVLYL++QN Sbjct: 96 GETSAAALRIVALAARRLARTVVREQPILSNWQALLDYLHIDMAHLTVERVRVLYLNSQN 155 Query: 69 QLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLV 128 LI + GT++ + ++ REV+++A+ AAA+IL HNHPSG PS+AD +TQ+++ Sbjct: 156 MLILDHLVSEGTLDESPIYTREVIRKAMDVGAAAMILVHNHPSGSPKPSRADIQVTQKVM 215 Query: 129 QVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 + +L+ + V DH+++G S GL+ Sbjct: 216 EAARLMGMTVHDHIVIGREGHTSLKAQGLI 245 >UniRef50_C4XRP2 DNA repair protein RadC n=4 Tax=Desulfovibrionales RepID=C4XRP2_DESMR Length = 228 Score = 99.0 bits (245), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 47/120 (39%), Positives = 71/120 (59%) Query: 39 STHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHF 98 S V E R + E EEF + +D +N+L+ E + GT+++ V+PREV+ AL + Sbjct: 109 SPDVVAEMARARIGVKEHEEFWMALVDTKNRLVGWERVSKGTVDQAAVYPREVIAMALRY 168 Query: 99 NAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 NA+ VIL HNHP + PS D T+R+V + +DIRV DHL+V + +SF G++ Sbjct: 169 NASGVILVHNHPGADPKPSAEDMAFTRRIVAAAREMDIRVLDHLVVTENRFFSFQAEGMI 228 >UniRef50_Q46A65 UPF0758 protein Mbar_A2303 n=2 Tax=Methanosarcinaceae RepID=Y2303_METBF Length = 229 Score = 98.6 bits (244), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 49/135 (36%), Positives = 81/135 (60%) Query: 24 RALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINR 83 R L+ + EP S V + M ++E+F L LD +NQ++ E + G++N Sbjct: 94 RRLETFVEEPKRKVCSPKDVYTLMYPKMREQKKEKFITLCLDTKNQILKEEVVSIGSLNA 153 Query: 84 TEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLI 143 + VHPREV K AL ++A+VI+ HNHPSG+ +PS+ D +T+++V+ +L+ I V DH+I Sbjct: 154 SIVHPREVFKSALMESSASVIMIHNHPSGDPSPSREDIMVTEKMVEGGKLLGIDVLDHII 213 Query: 144 VGGRQIYSFAEHGLL 158 +G + S + G + Sbjct: 214 IGEGRYVSLKDEGFV 228 >UniRef50_C3WLA1 DNA repair protein radC n=2 Tax=Fusobacterium RepID=C3WLA1_9FUSO Length = 242 Score = 98.2 bits (243), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 44/121 (36%), Positives = 76/121 (62%) Query: 38 TSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALH 97 T A+ ++LR + + E+F V+YL + N++IA E +GT++R+ ++PRE+ KR + Sbjct: 122 TDKEALLKFLRNKIGYEDVEKFYVIYLSSSNEVIAFEESSSGTLDRSSIYPREIYKRVIM 181 Query: 98 FNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGL 157 NA ++I+AHNHPSG T PS+ D +T + + L+ + +H+I+ +SF E GL Sbjct: 182 ENAKSIIIAHNHPSGNTCPSKCDIDITNEIAKGLKNFGALLLEHIIITRDSYFSFLEEGL 241 Query: 158 L 158 + Sbjct: 242 I 242 >UniRef50_C1QC41 DNA repair protein n=2 Tax=Brachyspira RepID=C1QC41_9SPIR Length = 227 Score = 98.2 bits (243), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 40/114 (35%), Positives = 71/114 (62%) Query: 45 EWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVI 104 +L + + L+ E F ++ LD + I+ E +F GTI+ ++PR++V+++L ++ VI Sbjct: 105 NYLIIKLGKLKFETFSIVCLDVNKKFISMEHIFRGTIDSATIYPRDLVEKSLSLGSSYVI 164 Query: 105 LAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 ++HNHPSG PS+ D +T L + ++VDI++ DH+I+ YSF E G+ Sbjct: 165 VSHNHPSGIAKPSKEDINITNVLYKAFKMVDIKMLDHIIIAANSYYSFREDGMF 218 >UniRef50_C6BYC2 DNA repair protein RadC n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BYC2_DESAD Length = 225 Score = 97.8 bits (242), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 49/123 (39%), Positives = 74/123 (60%) Query: 36 AFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRA 95 A +S V + + L +EEF + ++N+N++I E L GT+++T V+PREVV A Sbjct: 103 AISSPDVVYKAAMARIGNLSKEEFWIALVNNRNKVICWERLSEGTVDKTAVYPREVVALA 162 Query: 96 LHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEH 155 L NA+ VIL HNHP G+ +PS D T + + Q ++IR+ DH+IV + +SF E Sbjct: 163 LRHNASGVILTHNHPGGDPSPSPEDTERTMEIAALCQDMEIRLLDHVIVTADRFHSFKEA 222 Query: 156 GLL 158 G L Sbjct: 223 GYL 225 >UniRef50_B1YJT0 DNA repair protein RadC n=2 Tax=Exiguobacterium RepID=B1YJT0_EXIS2 Length = 217 Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 44/114 (38%), Positives = 73/114 (64%) Query: 45 EWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVI 104 E L M ++E F LYL+ +N++I+ +TLF G +N + VHPR++ + A+ +AA+ I Sbjct: 104 ELLMEEMRLYQQEHFICLYLNTKNEVISKKTLFIGGLNTSIVHPRDIFREAIRCSAASFI 163 Query: 105 LAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 HNHPSG+ TPS+ D +++R+V+ +L+ I DHL++G Q S + G + Sbjct: 164 AVHNHPSGDPTPSREDIEVSERMVEAGRLIGISCIDHLVIGHGQFISMKQRGFM 217 >UniRef50_C9L5T8 DNA repair protein RadC n=4 Tax=Clostridiales RepID=C9L5T8_RUMHA Length = 231 Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 44/125 (35%), Positives = 75/125 (60%) Query: 34 GVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVK 93 G++F ++ ++ + E+E + LD +N L+ E +F GT+N + +PRE+ Sbjct: 107 GLSFRHPASIADYYMEQLRHEEQELLICMMLDTKNHLLGDEMIFKGTVNSSLANPREIFL 166 Query: 94 RALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFA 153 A+ ++A ++L HNHPSG+ TPSQAD TQR+ + +L+ I + DH+I+G + SF Sbjct: 167 SAVSYHAVGILLVHNHPSGDCTPSQADVDFTQRVKEAGELLGIPLLDHIIIGDCKYLSFR 226 Query: 154 EHGLL 158 E G+ Sbjct: 227 EQGIF 231 >UniRef50_C0BG63 DNA repair protein RadC n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BG63_9BACT Length = 232 Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 50/122 (40%), Positives = 70/122 (57%) Query: 37 FTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRAL 96 S+ V E + + + L EEF +LYL+ N+L+ L G I +T V R KRA Sbjct: 111 LNSSKIVYESIYMDLDTLPHEEFWILYLNQSNRLLEKYRLSKGGITQTTVDLRLAFKRAF 170 Query: 97 HFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHG 156 A +ILAHNHPSG TPS +D+ +T++ VD+R+ DHLIV + +SFA+ G Sbjct: 171 EVGATGLILAHNHPSGGLTPSSSDEQITRKFKLAAASVDLRILDHLIVSKKGYFSFADEG 230 Query: 157 LL 158 LL Sbjct: 231 LL 232 >UniRef50_Q2GL92 DNA repair protein RadC n=12 Tax=Rickettsiales RepID=Q2GL92_ANAPZ Length = 232 Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 46/114 (40%), Positives = 73/114 (64%) Query: 45 EWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVI 104 ++L++ + E F VLYL+ + LIA E TGT++ T ++ REV+++AL A ++ Sbjct: 119 DYLKVKIGNSTIENFLVLYLNKRYSLIADEVQSTGTVDETPLYIREVIRKALLCGAVYIV 178 Query: 105 LAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 ++HNHPSG+ PS+AD +T +L +DI + DH+IV ++ YSF HGLL Sbjct: 179 ISHNHPSGDPKPSKADINVTNKLRIACNSMDIELVDHVIVTSKRHYSFKTHGLL 232 >UniRef50_A8ZYJ4 DNA repair protein RadC n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZYJ4_DESOH Length = 167 Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 42/102 (41%), Positives = 71/102 (69%), Gaps = 1/102 (0%) Query: 57 EEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTP 116 E LYLD +N+++A E +FTG+++ T V+PRE++KR + ++AV++ HNHP+G+ P Sbjct: 50 ETLYCLYLDTKNRILAMEKMFTGSLSSTAVYPREIIKRVIALKSSAVVITHNHPTGDPGP 109 Query: 117 SQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 S D +T RL+ L+ +++ + DH+IV G YSFA+ G++ Sbjct: 110 SVEDTRITIRLLVALKSMNVDLHDHIIV-GEGYYSFADAGVI 150 >UniRef50_B9XSW5 DNA repair protein RadC n=1 Tax=bacterium Ellin514 RepID=B9XSW5_9BACT Length = 244 Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 49/124 (39%), Positives = 77/124 (62%) Query: 24 RALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINR 83 R + L G + A+ + LR + E E F+V+ L+ + +LI E + GT++ Sbjct: 103 RRMAAELKPEGTVLDNPEAIADLLREENRSYEVENFQVVLLNTRRKLIRVENITQGTLDT 162 Query: 84 TEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLI 143 +HPREV K A+ NA+A++LAHNHPSG+ TPS+AD +T+ L++ QL+ I + DH+I Sbjct: 163 LLIHPREVFKSAISANASAIVLAHNHPSGDPTPSEADIKVTRDLIRAGQLLKIEILDHII 222 Query: 144 VGGR 147 +G R Sbjct: 223 LGRR 226 >UniRef50_B0S3Y4 UPF0758 protein FMG_0357 n=2 Tax=Finegoldia magna RepID=Y357_FINM2 Length = 223 Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 56/138 (40%), Positives = 79/138 (57%), Gaps = 10/138 (7%) Query: 16 RRLIQRALRALDR-HLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHE 74 RRL R +A+D L++P +V E + + + E F L LD +N++I+ E Sbjct: 89 RRLSLR--KAMDSFSLNDP-------DSVAEIFCNEIGSCDVENFYALLLDTKNRIISKE 139 Query: 75 TLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLV 134 + GTIN++ VHPREV K A+ A ++IL HNHPSG PS AD +T+RL +V LV Sbjct: 140 LISKGTINQSIVHPREVFKSAIKKGANSIILVHNHPSGSLIPSNADIEVTKRLDKVGDLV 199 Query: 135 DIRVPDHLIVGGRQIYSF 152 I+V DH+IV S Sbjct: 200 GIQVLDHIIVSSNDSLSM 217 >UniRef50_Q1GQ77 DNA repair protein RadC n=1 Tax=Sphingopyxis alaskensis RepID=Q1GQ77_SPHAL Length = 354 Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 51/126 (40%), Positives = 80/126 (63%), Gaps = 1/126 (0%) Query: 22 ALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTI 81 A+++L L + G+ + +R +L+L M AL E RVL+LD +LIA E L GTI Sbjct: 85 AIQSLRADLDDRGIDPANPKLLR-YLKLSMGALPHETLRVLFLDPARRLIADEQLQQGTI 143 Query: 82 NRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDH 141 ++PR + +RA+ +AAA+IL HNHPSG+ TPS+AD T RL + + ++I++ +H Sbjct: 144 GHVAIYPRTIFRRAVELDAAAIILVHNHPSGDPTPSEADVATTARLAAIGRALEIQLLEH 203 Query: 142 LIVGGR 147 ++V R Sbjct: 204 IVVALR 209 >UniRef50_C0QCU0 RadC2 n=2 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QCU0_DESAH Length = 187 Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 45/106 (42%), Positives = 72/106 (67%), Gaps = 2/106 (1%) Query: 55 EREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGET 114 +RE+F +L L+ +N++I + TG+++ VHPREV+K A+ N++A+IL HNHPSG Sbjct: 74 DREQFCILMLNAKNKIIGLNIVSTGSLSSATVHPREVLKPAILANSSAMILCHNHPSGTL 133 Query: 115 TPSQADKTLTQRLVQVLQLVDIRVPDHLIVG--GRQIYSFAEHGLL 158 TPS D +T+R++Q ++ I V +HLI+ YSF+E+GL+ Sbjct: 134 TPSPEDIAITKRIIQASDIMGITVHEHLIINMDDDSFYSFSENGLI 179 >UniRef50_C8PDJ9 DNA repair protein RadC n=1 Tax=Lactobacillus iners DSM 13335 RepID=C8PDJ9_9LACO Length = 205 Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 48/141 (34%), Positives = 82/141 (58%), Gaps = 3/141 (2%) Query: 18 LIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLF 77 L+ ++A+ R E +F S+ + +L ++ +E +Y+D +N++IA + +F Sbjct: 68 LLLNRVKAIKREKME---SFCSSSQIGYYLSNVLSGCYQEHLMAVYVDVKNKIIAEKVIF 124 Query: 78 TGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIR 137 GT+N+ +HPR++ + A+ +NAA LAHNHPS + TPS+ D +T+++ V + + IR Sbjct: 125 KGTLNQAIIHPRDIFRWAIIYNAAGFFLAHNHPSEDLTPSEQDIQVTKKISSVSECMGIR 184 Query: 138 VPDHLIVGGRQIYSFAEHGLL 158 DH IV SF E LL Sbjct: 185 FLDHFIVNTGNYLSFKEMELL 205 >UniRef50_C6LCB9 DNA repair protein RadC n=3 Tax=Clostridiales RepID=C6LCB9_9FIRM Length = 231 Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 48/135 (35%), Positives = 79/135 (58%) Query: 24 RALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINR 83 R + + + G FTS A+ ++ L++E +L D + +L++ +T+ GT+N+ Sbjct: 96 RRIAKSVASEGNTFTSAQAIADYYMEDFRHLQQERVFLLSFDTKGELLSEKTISVGTVNQ 155 Query: 84 TEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLI 143 + V PRE+ AL A VIL HNHPSG PS D+ LT R+ + +L++I + DH+I Sbjct: 156 SCVSPREIFLEALSCRAVYVILLHNHPSGNPQPSPEDRLLTMRVHESGKLLEIPLMDHII 215 Query: 144 VGGRQIYSFAEHGLL 158 +G R+ +SF E G + Sbjct: 216 LGDRRYFSFREEGFI 230 >UniRef50_B9QT39 DNA repair protein RadC n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QT39_9RHOB Length = 228 Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 48/116 (41%), Positives = 76/116 (65%) Query: 43 VREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAA 102 V ++++ M LE E+FR L+L+ ++ +IA E + GT++ T V+PRE+++RAL A+A Sbjct: 113 VIDYIQATMGYLEIEQFRCLFLNKKHGVIADEVMQEGTVDHTPVYPRELMRRALILQASA 172 Query: 103 VILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +IL HNHPSG+ TPS+ D +T +LV + + + I + DH+IV SF LL Sbjct: 173 LILVHNHPSGDPTPSRPDIEMTAQLVDIAKPLGIEINDHIIVARGLAVSFKGMNLL 228 >UniRef50_B5YL92 DNA repair protein RadC n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YL92_THEYD Length = 222 Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 50/140 (35%), Positives = 78/140 (55%), Gaps = 1/140 (0%) Query: 19 IQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFT 78 I A+ R L + G+ + V + + ++E F L LD + LI T+F Sbjct: 81 IMAAIEFSKRFLLKEGIKIKNVDDVLKITE-ELKDKKQEYFLSLTLDGASNLIQKRTVFI 139 Query: 79 GTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRV 138 GT+N + VHPRE+ A+ AA +I HNHPSG++ PS+ D +T+RLV++ +++ I V Sbjct: 140 GTLNHSIVHPREIFADAISDRAAGIIFVHNHPSGDSEPSKQDIEITKRLVEIGKMLGIEV 199 Query: 139 PDHLIVGGRQIYSFAEHGLL 158 DH+I+ YSF G+L Sbjct: 200 IDHIIISKNGYYSFQAEGML 219 >UniRef50_D1N9M0 DNA repair protein RadC n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N9M0_9BACT Length = 227 Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 50/120 (41%), Positives = 76/120 (63%), Gaps = 1/120 (0%) Query: 39 STHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHF 98 +T + +LR+ + ++E F VL+L+ QN L+ + + GT++R V+ REV+++A++ Sbjct: 109 NTTKIVNFLRMKLGGGKKETFMVLFLNAQNHLLCFDVI-PGTVDRATVYAREVLEKAINT 167 Query: 99 NAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 A AVILAHNHP+G PS AD LT + QVLQ V I + DH+IV +SFA +L Sbjct: 168 KATAVILAHNHPTGICEPSPADIKLTNTIRQVLQPVGILLHDHIIVAPSCYFSFASRRML 227 >UniRef50_Q03R16 DNA repair protein n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03R16_LACBA Length = 220 Score = 95.9 bits (237), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 47/105 (44%), Positives = 67/105 (63%) Query: 54 LEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGE 113 L +E+ VL LD Q+++I +T+F GT+N VHPRE+ + A+ AA VI+AHNHPSG+ Sbjct: 102 LLQEQLEVLALDAQHRIIERQTVFQGTLNSCPVHPREIFRVAVMSGAATVIVAHNHPSGQ 161 Query: 114 TTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 PS +D+ QRL QL+ I + D +VG +SF E G+L Sbjct: 162 PQPSTSDRAFMQRLAACGQLMGIPLLDGFVVGLHSYFSFKEAGIL 206 >UniRef50_A9KL05 DNA repair protein RadC n=7 Tax=Clostridiales RepID=A9KL05_CLOPH Length = 232 Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 43/125 (34%), Positives = 77/125 (61%) Query: 34 GVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVK 93 G+ +T +V E+ M +L+ E+ R+L D +++L+ E + GT+N + + PREV Sbjct: 107 GIRYTDPSSVAEYYMQDMRSLKTEQSRLLMFDTKSKLLREEIISIGTVNASIMSPREVFL 166 Query: 94 RALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFA 153 A+ + A +IL HNHPSG+ TPS+ D +T+R+ + +L+ + + DH+I+G + S Sbjct: 167 LAVKYEAVYIILLHNHPSGDPTPSKEDIAVTKRMKEAGELLGVTLMDHIIIGDNRYISLK 226 Query: 154 EHGLL 158 E G++ Sbjct: 227 EQGII 231 >UniRef50_B2V090 UPF0758 protein CLH_0547 n=18 Tax=Clostridium RepID=Y547_CLOBA Length = 229 Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 42/138 (30%), Positives = 82/138 (59%), Gaps = 5/138 (3%) Query: 21 RALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGT 80 R ++ DR + S + + + M+ L++E +V++L+ +N +I + +F G+ Sbjct: 97 RTFKSADRD-----IKIMSPNDIAMLINGEMSLLKQEILKVIFLNTKNIVIGTKDVFKGS 151 Query: 81 INRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPD 140 +N + VHPRE+ K A++ ++ +I+ HNHPSG+ TPS+ D +T R+ + +++ I++ D Sbjct: 152 LNTSIVHPREIFKEAVNKSSTKIIICHNHPSGDPTPSKEDINITLRIKECGEIMGIQLLD 211 Query: 141 HLIVGGRQIYSFAEHGLL 158 H+I+G S E G + Sbjct: 212 HIIIGKNGFISLKEKGFI 229 >UniRef50_A5ZRS6 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=A5ZRS6_9FIRM Length = 236 Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 46/122 (37%), Positives = 70/122 (57%) Query: 37 FTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRAL 96 F S ++ + + E+E + LDNQN L+ L GT+N T + PREV AL Sbjct: 110 FNSPDSIAAYYMEQLRHQEQEIMICMMLDNQNHLLGDTMLSKGTVNATLITPREVYLEAL 169 Query: 97 HFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHG 156 ++A +IL HNHP G PS+ DK +T+R+ Q +++ I + DH+I+G + SF E G Sbjct: 170 RYHAVNLILIHNHPGGNPAPSKCDKEITERICQAGEMLGINLLDHIIIGDHRYISFREEG 229 Query: 157 LL 158 L+ Sbjct: 230 LM 231 >UniRef50_C5D8D2 DNA repair protein RadC n=4 Tax=Firmicutes RepID=C5D8D2_GEOSW Length = 169 Score = 95.5 bits (236), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 50/132 (37%), Positives = 78/132 (59%), Gaps = 7/132 (5%) Query: 27 DRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEV 86 +R + P A+ + L+ + +RE+F V+ LD +NQ A G++N + V Sbjct: 45 ERQIKSPEDAY-------KLLKPFLVEADREKFVVVCLDTKNQPTAINICHIGSLNSSIV 97 Query: 87 HPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGG 146 HPREV K A+ N+A++I+AHNHPS + TPS+ D +T+RLV+ ++V I + DHLIV Sbjct: 98 HPREVFKSAILSNSASIIVAHNHPSSDPTPSREDIEVTKRLVEAGRIVGIELLDHLIVCE 157 Query: 147 RQIYSFAEHGLL 158 + S E G + Sbjct: 158 EKFVSLKEKGYI 169 >UniRef50_Q82ZX1 UPF0758 protein EF_2926 n=40 Tax=Firmicutes RepID=Y2926_ENTFA Length = 232 Score = 95.5 bits (236), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 42/121 (34%), Positives = 74/121 (61%) Query: 38 TSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALH 97 TS+ V + L M L++E +YL+ +N +I +T+F G++N++ HPRE+ + A+ Sbjct: 109 TSSQQVAQRLLQEMKGLQQEHLICIYLNTKNDIIQQKTIFKGSLNQSIAHPREIFREAVK 168 Query: 98 FNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGL 157 +++A ++LAHNHPSG TPS D T+R+ + +++ I++ DH+I+G S E Sbjct: 169 YSSARILLAHNHPSGNPTPSPQDIQFTKRMEECGEMMGIQLLDHIILGDSGYISLREENF 228 Query: 158 L 158 Sbjct: 229 F 229 >UniRef50_Q6AQC9 Related to DNA repair protein RadC n=4 Tax=Deltaproteobacteria RepID=Q6AQC9_DESPS Length = 249 Score = 95.5 bits (236), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 49/120 (40%), Positives = 77/120 (64%), Gaps = 1/120 (0%) Query: 39 STHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHF 98 S+ V E+L M L++E F V++LD+ + +I E + G++ VHPRE++ +AL Sbjct: 114 SSTEVVEYLSYRMRGLKKEVFCVVFLDSSHGIICSEIIAEGSLTVNTVHPRELLVKALEH 173 Query: 99 NAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +AAA+I++HNHPSG PS D LT+ L + + I++ DH+I+G YSFA+HGL+ Sbjct: 174 HAAALIISHNHPSGALLPSPQDIQLTRLLYFLCSSMQIQLLDHIIIGD-GAYSFADHGLM 232 >UniRef50_Q8RF15 UPF0758 protein FN0909 n=11 Tax=Fusobacterium RepID=Y909_FUSNN Length = 232 Score = 95.5 bits (236), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 43/114 (37%), Positives = 72/114 (63%) Query: 45 EWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVI 104 ++LR + E E+F V+YL + N++I E GT++R+ V+PRE+ K+ ++ NA ++I Sbjct: 119 KYLRNKIGYEEIEKFYVIYLSSSNEVIEFEENSVGTLDRSSVYPREIYKKVINLNAKSII 178 Query: 105 LAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 LAHNHPS TPS++D LT + + L+ + +H+I+ +SF E GL+ Sbjct: 179 LAHNHPSDNITPSKSDIELTNEIAKGLKNFGALLIEHIIITKNSYFSFLEEGLI 232 >UniRef50_C2BCF6 DNA repair protein RadC n=2 Tax=Anaerococcus RepID=C2BCF6_9FIRM Length = 226 Score = 95.5 bits (236), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 46/127 (36%), Positives = 80/127 (62%) Query: 19 IQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFT 78 +Q R ++ L++ S E+++ ++ +RE F + L+N+N++I+ E + Sbjct: 87 LQFGKRIKEKILNKKKYQINSNEEAYEFIKDTISLKDREYFYTILLNNKNEVISKELISI 146 Query: 79 GTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRV 138 G ++ + V+PREV K A+ +A ++ILAHNHPSG +PS+AD +T RL+ +++DI V Sbjct: 147 GDLSSSIVNPREVFKPAIKKSAKSMILAHNHPSGNPSPSKADLLITHRLIDAGEILDITV 206 Query: 139 PDHLIVG 145 DHLI+G Sbjct: 207 LDHLIIG 213 >UniRef50_A6DS55 DNA repair protein RadC n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DS55_9BACT Length = 235 Score = 95.1 bits (235), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 45/114 (39%), Positives = 71/114 (62%), Gaps = 6/114 (5%) Query: 51 MAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHP 110 +A +EEF +L LD +N+L+ + G ++R+ VHPREV + AL + A +ILAHNHP Sbjct: 120 LAGKSKEEFHILLLDTKNRLMRSSQISIGLLDRSHVHPREVFREALRYGTAKIILAHNHP 179 Query: 111 SGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVG------GRQIYSFAEHGLL 158 SG+ +PS D T+ L++ +++ ++V DHLI+G RQ S + GL+ Sbjct: 180 SGDPSPSPQDIECTKNLIEAGEILGVKVVDHLIIGHKLPGDSRQFVSLRQLGLV 233 >UniRef50_A1B298 DNA repair protein RadC n=7 Tax=Bacteria RepID=A1B298_PARDP Length = 162 Score = 94.7 bits (234), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 55/151 (36%), Positives = 88/151 (58%), Gaps = 2/151 (1%) Query: 8 PGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQ 67 P + Q++ ++ A + L RHL++ V TS AV ++ L + + E F VLYLD + Sbjct: 14 PHRFSAQEQAVVYEARQILLRHLNQNPV-LTSWQAVLDYCALTIRG-DVERFHVLYLDRR 71 Query: 68 NQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRL 127 N+LI+ E L GT++ V+PREV++R L NA+A+I+ HNHP+G+ PS AD +T+ + Sbjct: 72 NRLISDECLAIGTVDHVPVYPREVLRRCLALNASALIIVHNHPAGDPEPSAADFAMTKEI 131 Query: 128 VQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 + + + DH+I G + S G L Sbjct: 132 RNASASLGVILHDHIITGAGRETSLRARGEL 162 >UniRef50_A5FMW5 UPF0758 protein Fjoh_0413 n=33 Tax=Bacteroidetes RepID=Y413_FLAJ1 Length = 229 Score = 94.7 bits (234), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 45/108 (41%), Positives = 66/108 (61%) Query: 51 MAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHP 110 + L EEF VL+L+N N++I+ L G I T V R V K L A +IL HNHP Sbjct: 122 IGELPHEEFWVLFLNNSNKVISKAQLSKGGIAGTIVDVRLVFKLGLENGATGLILCHNHP 181 Query: 111 SGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 SGE PSQADK +T+++ +++D+++ DHLI+ + YSF + G+ Sbjct: 182 SGELNPSQADKQITKKIKTAGEILDVKILDHLIITETKYYSFVDEGIF 229 >UniRef50_A1BHA1 UPF0758 protein Cpha266_1761 n=11 Tax=Chlorobiaceae RepID=Y1761_CHLPD Length = 223 Score = 94.7 bits (234), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 49/120 (40%), Positives = 74/120 (61%) Query: 39 STHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHF 98 S V E++ + + +E VL+L+ +NQ+I +E + GT+N + HPREV K A+ Sbjct: 103 SARDVFEYMAGRVPDITKEHLFVLHLNTKNQIIRNEQVTVGTLNASLAHPREVFKSAIRE 162 Query: 99 NAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +A A+IL HNHPSG+ PS AD+ +T+ L Q + I + DH+I+G +SF EH LL Sbjct: 163 SAHAIILVHNHPSGDVEPSNADRQVTEILRQAGSFLQIDLLDHVIIGVDTWFSFREHSLL 222 >UniRef50_B5YIR9 DNA repair protein n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIR9_THEYD Length = 224 Score = 94.7 bits (234), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 46/122 (37%), Positives = 76/122 (62%) Query: 37 FTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRAL 96 F S V + + L++E F L LD + +LI + GT+N++ +HPREV K A+ Sbjct: 103 FNSAEIVYNYFFPKLNGLKKEVFITLLLDTKLRLIREVKVSEGTLNQSLIHPREVFKDAV 162 Query: 97 HFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHG 156 +A AVIL HNHPSG+ TPS+ D +T++L + ++++I + DH+I+G + +S E G Sbjct: 163 KESAYAVILIHNHPSGDPTPSEQDIEITKKLKKASEILEIPILDHVIIGSGKYFSMKERG 222 Query: 157 LL 158 ++ Sbjct: 223 VV 224 >UniRef50_Q3A8G4 UPF0758 protein Pcar_0065 n=2 Tax=Bacteria RepID=Y065_PELCD Length = 227 Score = 94.7 bits (234), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 55/139 (39%), Positives = 82/139 (58%), Gaps = 8/139 (5%) Query: 24 RALDRHLHEPGVAFTSTHAV----REWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTG 79 R R+ PG +TS AV E LR H +RE F L LD++N+L+ + G Sbjct: 93 RRFGRNPLRPGDRYTSPQAVFAHFHERLRDH----KRERFIALLLDSKNRLLREVGISEG 148 Query: 80 TINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVP 139 ++ + VHPR+V + +AAAV+ HNHPSG+ +PS+ D +TQRL +V +L+ +RV Sbjct: 149 SLTASIVHPRDVFAPVVRESAAAVLFVHNHPSGDPSPSREDLDITQRLREVGELMGVRVL 208 Query: 140 DHLIVGGRQIYSFAEHGLL 158 DH+I+G S A+ G+L Sbjct: 209 DHIIIGDEGYVSLADRGVL 227 >UniRef50_B1I0K4 DNA repair protein radC-like protein n=1 Tax=Lysinibacillus sphaericus C3-41 RepID=B1I0K4_LYSSC Length = 204 Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 43/142 (30%), Positives = 83/142 (58%) Query: 17 RLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETL 76 R ++ L+ ++ + ++ E++ M L++E F L+LD ++++I ET+ Sbjct: 63 RAVKGLLKIMNSERQGKVKSISNASEAAEYVMDEMKNLKQEHFVCLFLDTRSRVIKKETI 122 Query: 77 FTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDI 136 F G++N + PRE+++ AL ++AA +I HNH SG++ PS D +T+RL + L+ + Sbjct: 123 FIGSLNSSIASPREIMRLALKYSAAGIICLHNHCSGDSEPSMQDLEVTRRLFEAGDLMGV 182 Query: 137 RVPDHLIVGGRQIYSFAEHGLL 158 + DH+++G + S E+ LL Sbjct: 183 ELIDHIVIGNNEFTSIRENNLL 204 >UniRef50_Q0F0W4 DNA repair protein RadC n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F0W4_9PROT Length = 261 Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 43/114 (37%), Positives = 71/114 (62%) Query: 43 VREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAA 102 VR +LRL + E F ++ D Q++L+ + LF GT++RT V+PR ++KRAL +A Sbjct: 146 VRAYLRLLVQGRGMECFGAMFTDQQHRLLTTQILFEGTVDRTAVYPRNLMKRALELDARG 205 Query: 103 VILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHG 156 +IL HNHP G S D LT+R+ + +++++ DH ++ +++ SF EHG Sbjct: 206 MILFHNHPGGTPHASNEDIELTRRMAEACAPLELKILDHFLIADKEVLSFREHG 259 >UniRef50_Q042N7 DNA repair protein n=7 Tax=Lactobacillus RepID=Q042N7_LACGA Length = 206 Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 45/123 (36%), Positives = 72/123 (58%) Query: 36 AFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRA 95 + S+ V ++ + +EE +YLD++N++IA + +F GT+NR HPR++ + A Sbjct: 84 SLYSSSQVGCYIADKLCGRPQEELYGIYLDSKNKIIAEKLIFQGTVNRAVAHPRDIFRWA 143 Query: 96 LHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEH 155 + +N+ A +AHNHPSG+ PSQ D T++LV+ + + I DH IV SF E Sbjct: 144 VIYNSTAFFVAHNHPSGDEQPSQHDLRFTKKLVEASKCMGIDFLDHFIVTDNTYLSFREM 203 Query: 156 GLL 158 LL Sbjct: 204 ELL 206 >UniRef50_C5TNC6 DNA repair protein RadC n=3 Tax=Neisseria RepID=C5TNC6_NEIFL Length = 224 Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 55/135 (40%), Positives = 76/135 (56%), Gaps = 1/135 (0%) Query: 24 RALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINR 83 R L L E + ++ +V ++LRLH+ + E L L+ QNQLIA L GT+ Sbjct: 91 RILGEDLQEQ-IILSNPKSVADYLRLHLGHEKIEVSVALLLNRQNQLIAVRELSRGTVAE 149 Query: 84 TEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLI 143 V+ RE+VK AL A ++ILAHNHP PS++D T+RL Q L LVDI + DH I Sbjct: 150 NTVYIREIVKLALDEYADSLILAHNHPGSSARPSESDVQFTERLKQALSLVDITLLDHFI 209 Query: 144 VGGRQIYSFAEHGLL 158 V ++ S E G + Sbjct: 210 VTAKETCSLREQGYM 224 >UniRef50_Q6F7Z8 UPF0758 protein ACIAD3126 n=19 Tax=Proteobacteria RepID=Y3126_ACIAD Length = 271 Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 47/135 (34%), Positives = 78/135 (57%) Query: 24 RALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINR 83 R L+ + H+ + S+ V ++LR + ++E F VL LD++ + + + LF G++N Sbjct: 108 RYLNHYFHQDALNLNSSRLVLDYLRYELLGEKQEVFAVLCLDSELRKLNFKKLFYGSLNA 167 Query: 84 TEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLI 143 + ++ AL +A +++AHNHP G+ PS AD LT +L Q QLV+I++ DH I Sbjct: 168 CNISINHTLRYALQQHACHIVIAHNHPFGKAEPSAADLDLTHQLYQACQLVEIKLLDHFI 227 Query: 144 VGGRQIYSFAEHGLL 158 + +SFAE LL Sbjct: 228 IAKDGTFSFAERALL 242 >UniRef50_Q4FQM6 UPF0758 protein Psyc_1834 n=3 Tax=Moraxellaceae RepID=Y1834_PSYA2 Length = 227 Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 52/134 (38%), Positives = 75/134 (55%), Gaps = 1/134 (0%) Query: 24 RALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINR 83 R LD L + G + V++++ H+ RE F VL LDN LI E LFTG I+ Sbjct: 91 RYLDSQL-KTGQGLGRSQMVKDYISTHLRGEPREVFAVLCLDNALNLINFEILFTGGISS 149 Query: 84 TEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLI 143 V + V++ AL + +I+AHNHP + TPS AD LT L + L+D+ + DH+I Sbjct: 150 CSVCIKHVLRHALSHATSQLIIAHNHPHTDATPSTADNLLTYELKKACDLIDLSLIDHVI 209 Query: 144 VGGRQIYSFAEHGL 157 VG + S+AE+ L Sbjct: 210 VGRNETLSYAENCL 223 >UniRef50_B6AT60 DNA repair protein RadC n=1 Tax=Rhodobacterales bacterium HTCC2083 RepID=B6AT60_9RHOB Length = 253 Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 67/158 (42%), Positives = 93/158 (58%), Gaps = 4/158 (2%) Query: 3 QLSFLPGEMTPQDRRLIQRALR--ALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 +L L G QD +L+ A + A R H P + +S AV + R +A E EEF Sbjct: 98 RLEALIGVSATQDLKLVFGASKRMAKARIAHRPLI--SSWDAVLTYCRTSLAHKETEEFH 155 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 VL+L+ +N LIA ETL GT++ V+PREV+KRAL N+ A+IL HNHPSG+ +PS +D Sbjct: 156 VLFLNRRNMLIADETLGVGTVDHVPVYPREVLKRALELNSCAIILVHNHPSGDPSPSSSD 215 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +T+ + Q + I + DHLI+G SF GLL Sbjct: 216 IEMTKLIKQAADSLSITLHDHLIIGATGETSFVSEGLL 253 >UniRef50_C0GE80 DNA repair protein RadC n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GE80_9FIRM Length = 189 Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 53/160 (33%), Positives = 93/160 (58%), Gaps = 6/160 (3%) Query: 2 KQLSFLPGEMTPQDRRLIQRALRALDRHLHEP---GVAFTSTHAVREWLRLHMAALEREE 58 K+L +PG + P+ + + +A+ L + L EP + S V E + ++A E E Sbjct: 33 KELLRVPG-LGPRKAKQL-KAVFDLSKALLEPDDTSITIQSPADVFENFK-YLALHEEEY 89 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 L+L+ +N+++ H T+ GT+N + +HPREV A+ A+V++ HNHPSG+ TPS+ Sbjct: 90 LVALFLNTKNKILQHTTISKGTLNTSLIHPREVFAPAIRIKCASVVILHNHPSGDPTPSR 149 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D +T+RL + +++ I + DH+++G + S E LL Sbjct: 150 EDIDITKRLKEAGKIIGIELLDHIVIGNKGFVSLREKSLL 189 >UniRef50_Q9LAI3 RadC (Fragment) n=2 Tax=Firmicutes RepID=Q9LAI3_BACSQ Length = 119 Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 43/108 (39%), Positives = 72/108 (66%) Query: 47 LRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILA 106 ++ + ++R+ F V+ LD +NQ A G++N + VHPREV+K A+ N+A+VI+A Sbjct: 8 VKCFLVDVDRDYFLVICLDTKNQPTAINICHVGSLNASLVHPREVMKPAILSNSASVIVA 67 Query: 107 HNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAE 154 HNHPS + TPS+ D +T+RL++ +++ I + DH++VGG + S E Sbjct: 68 HNHPSLDPTPSKEDINVTKRLIEAGRIMGIDILDHIVVGGNKYVSLKE 115 >UniRef50_B3JIE2 Putative uncharacterized protein n=10 Tax=Bacteroidales RepID=B3JIE2_9BACE Length = 220 Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 53/151 (35%), Positives = 86/151 (56%), Gaps = 4/151 (2%) Query: 11 MTPQDRRLIQRALRALDRHLHEPGV---AFTSTHAVREWLRLHMAALEREEFRVLYLDNQ 67 +TP +++ A+ L + L E V A S++ V + + + + EE VL L++ Sbjct: 68 LTPSRKKVAYAAIE-LYKRLKEGQVESPALLSSNNVYKMMHPVLCDIATEEMWVLLLNSS 126 Query: 68 NQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRL 127 ++LI + G IN V R ++K+AL++NA + I+ HNHPSG PS AD LT+ + Sbjct: 127 SKLIRKVRISCGGINTAPVDIRVIMKQALYYNAVSFIMVHNHPSGARKPSSADDRLTEAV 186 Query: 128 VQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 + + +DIR+ DH+IV G YS+A+ G L Sbjct: 187 KKAAETLDIRLVDHVIVAGNNYYSYADEGRL 217 >UniRef50_B9E733 DNA repair protein RadC homolog n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E733_MACCJ Length = 223 Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 51/141 (36%), Positives = 80/141 (56%), Gaps = 1/141 (0%) Query: 18 LIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLF 77 +I+ A+R + H E + S L + + +E F VL L+ +N ++ T+F Sbjct: 84 IIELAIR-MHTHTKETRIKVKSPACAANLLMERLRYMTQEHFIVLSLNTKNIVMHESTIF 142 Query: 78 TGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIR 137 G++N + VHPREV K A+ +AAA+I+ HNHPSG+ PS D T+RL++ ++ I Sbjct: 143 IGSLNASIVHPREVFKEAVKRSAAAIIVVHNHPSGDPEPSYEDIEATKRLIKCGEIFGID 202 Query: 138 VPDHLIVGGRQIYSFAEHGLL 158 V DH+I+G S E G+L Sbjct: 203 VLDHIIIGDGYYVSIKEKGIL 223 >UniRef50_A0LNF4 DNA repair protein RadC n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LNF4_SYNFM Length = 225 Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 57/122 (46%), Positives = 77/122 (63%) Query: 37 FTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRAL 96 F ST +L + E+F +L L++ N LI E + G++NRT V PR VV+ +L Sbjct: 103 FNSTRGAVSYLSALLCTERSEKFCILALNSTNDLIQMEEIQRGSVNRTAVFPRLVVEASL 162 Query: 97 HFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHG 156 A AVILAHNHP G+ PS AD+ LT+RL ++L +DI V DH+I+ G + YSFAEHG Sbjct: 163 KHRATAVILAHNHPGGDPNPSAADQQLTRRLKRILNDLDIIVHDHIIIAGPRYYSFAEHG 222 Query: 157 LL 158 L Sbjct: 223 GL 224 >UniRef50_B5V5B9 RadC n=5 Tax=Firmicutes RepID=B5V5B9_BACCE Length = 168 Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 48/112 (42%), Positives = 67/112 (59%) Query: 47 LRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILA 106 R + +RE F VL LD +NQ G++N + VHPREV+K A+ NAA++I+A Sbjct: 57 FRQFLDGADREYFIVLCLDIKNQPTTINVCHIGSLNSSIVHPREVLKPAIISNAASIIVA 116 Query: 107 HNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 HNHPS + TPS D +T+RL++ ++V I V DHLIV S E G + Sbjct: 117 HNHPSNDPTPSSEDLEVTKRLIEAGKVVGIEVLDHLIVCEESFVSLKEKGYM 168 >UniRef50_B5CP31 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B5CP31_9FIRM Length = 168 Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 55/152 (36%), Positives = 86/152 (56%), Gaps = 7/152 (4%) Query: 14 QDRRLIQRALRALD-RHLHEPGV----AFTSTHAVREWLRLHMAALEREEFRVLYLDNQN 68 Q+ R ++ L ++ R + EP + S AV E + ++ +RE F +L + N Sbjct: 6 QEIRTMENELEVVNIRLVREPSLYSEQILDSPQAVVELMAKELSQYDREVFCILNMKNNG 65 Query: 69 QLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLV 128 Q+I + GTIN + V PREV K ++ NA+A+I HNHPSG PS+ D +T++L Sbjct: 66 QVINMNLVSVGTINASLVIPREVFKSSILANASAIIGLHNHPSGNVKPSKEDMIVTRKLQ 125 Query: 129 QVLQLVDIRVPDHLIVGGR--QIYSFAEHGLL 158 + QL+ I + DH+IVGG ++ SF E +L Sbjct: 126 KCGQLLGIELLDHIIVGGTNGKMLSFREEKML 157 >UniRef50_A6TQH8 UPF0758 protein Amet_2289 n=54 Tax=cellular organisms RepID=Y2289_ALKMQ Length = 232 Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 46/122 (37%), Positives = 74/122 (60%) Query: 37 FTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRAL 96 S V L M L++E F + L+ ++++IA E + G++N + VHPREV A+ Sbjct: 111 IKSPDDVSNLLMEEMRYLKKEYFNIALLNTKHEVIAIENISIGSLNASIVHPREVFVVAI 170 Query: 97 HFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHG 156 +++A+IL HNHPSG+ +PS D +T+RLV+ +L+ I V DH+I+G YS E Sbjct: 171 KRSSSAIILVHNHPSGDPSPSGEDIRITKRLVEAGKLLGIEVLDHIIIGDNVYYSLKEKS 230 Query: 157 LL 158 ++ Sbjct: 231 MM 232 >UniRef50_A6QHJ5 UPF0758 protein NWMN_1555 n=52 Tax=Staphylococcus RepID=Y1555_STAAE Length = 228 Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 46/122 (37%), Positives = 70/122 (57%) Query: 35 VAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKR 94 + T V +++ M L +E F +L L+++N +I +F GT+N + VHPRE+ Sbjct: 101 IKITQPSDVADYMIPTMKDLTQEHFVILLLNSKNVVIKETCVFKGTLNSSIVHPREIFSI 160 Query: 95 ALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAE 154 A+ NA A+I HNHPSG+ TPSQ D T RL + ++ I + DH+I+G + S E Sbjct: 161 AVRENANAIIAVHNHPSGDVTPSQEDIITTMRLKECGLILGIDLLDHIIIGDNRFTSLVE 220 Query: 155 HG 156 G Sbjct: 221 AG 222 >UniRef50_A8YUM9 DNA repair protein RadC n=9 Tax=Lactobacillus RepID=A8YUM9_LACH4 Length = 207 Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 43/120 (35%), Positives = 72/120 (60%) Query: 39 STHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHF 98 S+ V +L + ++EE LY+DN N+++A + +F GT+N++ HPRE+ + A+ + Sbjct: 88 SSVEVGTYLADKLVGHKQEELWALYVDNGNRIVAEKKIFQGTLNKSVAHPREIFRWAVIY 147 Query: 99 NAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 + + + +AHNHPSG+ PS D LT+ L + +++ I + DH IVG Q S E L Sbjct: 148 DCSGIFIAHNHPSGKLIPSSNDFELTKDLYRAAKMMKIDLLDHFIVGQGQYLSMREKELF 207 >UniRef50_B4RM65 UPF0758 protein NGK_1225 n=25 Tax=Neisseriaceae RepID=Y1225_NEIG2 Length = 225 Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 49/116 (42%), Positives = 69/116 (59%) Query: 43 VREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAA 102 V ++LR H+ + E L L+ QNQLIA L GT+ ++ RE+VK AL A + Sbjct: 109 VADYLRFHLGQEKVEVSVALLLNRQNQLIAVRELSRGTVAENTIYIREIVKLALDEYADS 168 Query: 103 VILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +I+AHNHP G PSQ D T+RL Q + LVD+ + DH IV + + SF + GL+ Sbjct: 169 LIIAHNHPGGSPEPSQEDIMFTRRLAQAMSLVDVSLLDHFIVTSQTVRSFRQLGLM 224 >UniRef50_A2RLC4 UPF0758 protein llmg_1515 n=4 Tax=Lactococcus lactis RepID=Y1515_LACLM Length = 227 Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 43/108 (39%), Positives = 59/108 (54%) Query: 47 LRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILA 106 L M E+E YLD QNQ+I +T+F G N PRE++ A+ + +++A Sbjct: 114 LAFEMQNFEQEHLTATYLDGQNQIIEKKTIFIGAFNHATASPREILYHAVKNLSVGLLVA 173 Query: 107 HNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAE 154 HNHPSG PSQADK T+++ + I DH+IVG YSF E Sbjct: 174 HNHPSGNLQPSQADKIFTKKIKNACDNIGINFIDHIIVGAGNYYSFRE 221 >UniRef50_B3E339 UPF0758 protein Glov_0523 n=8 Tax=Desulfuromonadales RepID=Y523_GEOLS Length = 230 Score = 92.4 bits (228), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 53/143 (37%), Positives = 81/143 (56%), Gaps = 8/143 (5%) Query: 16 RRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHET 75 +R R L L+R FTS V ++ + +E F L LD +N++ Sbjct: 96 KRFQARRLETLER--------FTSPAQVFDFFHHELRDNRKELFLTLLLDGKNRITRKVQ 147 Query: 76 LFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVD 135 + G++N++ VHPREV A+ +AAAVI HNHPSG+ PS+ D +T+RL + +++ Sbjct: 148 VSEGSLNQSIVHPREVFAPAVRESAAAVIFIHNHPSGDPAPSREDHEITRRLNEAGEILG 207 Query: 136 IRVPDHLIVGGRQIYSFAEHGLL 158 I+V DH+I+G +SF E GLL Sbjct: 208 IKVLDHIIIGDGAYFSFVESGLL 230 >UniRef50_B2A699 DNA repair protein RadC n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A699_NATTJ Length = 241 Score = 92.0 bits (227), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 46/117 (39%), Positives = 68/117 (58%) Query: 37 FTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRAL 96 TS + + + RE F + L+ ++ L+ + + G++N T VHPREV RA+ Sbjct: 120 ITSPEDIFRLMNFRLKTETREHFLAVMLNTKSYLLKIDLISIGSLNATIVHPREVFNRAI 179 Query: 97 HFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFA 153 +A VIL HNHPSG+ PSQ D LT RLV L+ I + DH+I+G ++ YSF+ Sbjct: 180 RASACGVILVHNHPSGDPEPSQDDIKLTNRLVAAGDLLGIPIMDHVIIGHQKFYSFS 236 >UniRef50_Q93MC6 DNA repair protein RadC n=1 Tax=Clostridium perfringens RepID=Q93MC6_CLOPE Length = 145 Score = 92.0 bits (227), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 44/116 (37%), Positives = 72/116 (62%) Query: 43 VREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAA 102 V E ++ + ++RE V+ LD +N++ + GT+N + VHPREV K A+ N A+ Sbjct: 30 VFEVVKNFLGEVDREYLIVIVLDVKNKINSISVASVGTLNSSIVHPREVFKTAILANGAS 89 Query: 103 VILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +ILAHNHPSG+T+PS+ D +T R+ + L+ I + DH+I+G + S G++ Sbjct: 90 IILAHNHPSGDTSPSKDDINITTRIKECGVLMGIELLDHVILGDEKFISLKNEGII 145 >UniRef50_A5FRP1 DNA repair protein RadC n=6 Tax=cellular organisms RepID=A5FRP1_DEHSB Length = 228 Score = 91.7 bits (226), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 47/104 (45%), Positives = 66/104 (63%) Query: 55 EREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGET 114 ++E F L LD +++LI + G++ + VHPREV K AL +AA+VILAHNHPSG+T Sbjct: 125 KKEYFFCLMLDVKSRLIRVGHISVGSLEESVVHPREVFKEALSASAASVILAHNHPSGDT 184 Query: 115 TPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 PS D L+ RL + ++ I V DH+I+GG+ S GLL Sbjct: 185 EPSHDDIGLSARLREAGGIMGIEVLDHIIIGGQSFTSLKRQGLL 228 >UniRef50_C0R372 DNA repair protein RadC, putative n=11 Tax=Wolbachia RepID=C0R372_WOLWR Length = 218 Score = 91.7 bits (226), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 40/118 (33%), Positives = 72/118 (61%), Gaps = 1/118 (0%) Query: 41 HAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNA 100 + E+L + + ERE ++LYL+ + QLI E+ + G + + V+ +E+ ++AL NA Sbjct: 102 QGIVEYLNVSIGHSERECVKILYLNKRRQLIGEES-YIGEMEKAPVYIKEITRKALMKNA 160 Query: 101 AAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 ++I++HNHP G PS+ D+ +T+ L V +++ DH+I+ +SF E+GLL Sbjct: 161 TSIIMSHNHPGGSLEPSEEDQAVTKSLAAACSTVSVKLFDHIIITSGGYFSFRENGLL 218 >UniRef50_Q0FHF8 DNA repair protein RadC n=1 Tax=Roseovarius sp. HTCC2601 RepID=Q0FHF8_9RHOB Length = 168 Score = 91.7 bits (226), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 47/110 (42%), Positives = 74/110 (67%), Gaps = 1/110 (0%) Query: 45 EWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVI 104 ++L L+ E FRVL LD +N+LI + + G+I+ V+ EV++ AL +A+A+I Sbjct: 50 DYLALNAVRERVEVFRVLLLDRKNKLIRDKIMSRGSIDHVPVYVSEVMRSALVLDASALI 109 Query: 105 LAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVG-GRQIYSFA 153 L HNHPSG+ PSQAD +T+++V +++DI + DHLIVG GR+ +F+ Sbjct: 110 LCHNHPSGDPQPSQADIDMTRKIVDACRVMDITLHDHLIVGFGREQAAFS 159 >UniRef50_Q2B8H5 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B8H5_9BACI Length = 228 Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 47/116 (40%), Positives = 76/116 (65%), Gaps = 5/116 (4%) Query: 41 HAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNA 100 HAV+ ++ ++E F VL LD ++QLI+ + ++ GTI+ VHPREV + AL+ +A Sbjct: 116 HAVK-----YLTNEDQETFVVLALDTKHQLISRKEIYKGTIDAAIVHPREVFRFALNKSA 170 Query: 101 AAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHG 156 A +I+AH HPSG +PS+ D +T+RL +V + + I + DH+IVG + +S + G Sbjct: 171 AHIIVAHQHPSGNCSPSRDDIEVTKRLRKVGEEIGIPLSDHIIVGRNKYFSMKKQG 226 >UniRef50_C0GR82 DNA repair protein RadC n=2 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GR82_9DELT Length = 145 Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 39/102 (38%), Positives = 67/102 (65%) Query: 57 EEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTP 116 E F VL++DN+N++I + + GT+++ V PRE+++ A+ A+ +IL HNHP G + P Sbjct: 44 ENFVVLFVDNKNRMICKKVVAKGTVDQIPVFPREIIRHAILKQASGIILGHNHPGGASEP 103 Query: 117 SQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 S+ D+ LT ++ ++ + IRV DH+I+ +SF E+G L Sbjct: 104 SKQDRELTSKIKRIAMELGIRVLDHIIICDSGHFSFQENGYL 145 >UniRef50_B4RG10 DNA repair protein RadC n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RG10_PHEZH Length = 256 Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 46/114 (40%), Positives = 67/114 (58%) Query: 45 EWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVI 104 ++LR + RE FRV++LD + E L GT++ V+ REV++ AL +AAA++ Sbjct: 142 DYLRALLEFETRESFRVIFLDASGAWSSDEELGRGTVDHAPVYVREVMREALRRDAAALV 201 Query: 105 LAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 L HNHPSG+ TPS AD +T + + + V DHL+VG + SF GLL Sbjct: 202 LVHNHPSGDPTPSAADVQVTSEIAAAASALGMSVKDHLVVGSHGVASFQALGLL 255 >UniRef50_D2QCL1 DNA repair protein RadC n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QCL1_9SPHI Length = 157 Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 45/102 (44%), Positives = 62/102 (60%) Query: 57 EEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTP 116 E+F++L LD QN +A + TG + P+ + AL A +ILAHNHPSG P Sbjct: 54 EQFKILLLDQQNNCLAVSEIATGGTSACLADPKVIFATALKTRATGIILAHNHPSGNLAP 113 Query: 117 SQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 S+ADK+LT++L +L+DI V DHLIV SFA+ GL+ Sbjct: 114 SEADKSLTRKLKDGGKLLDIAVLDHLIVTSHNYRSFADDGLM 155 >UniRef50_A4W1K3 UPF0758 protein SSU98_1084 n=76 Tax=Streptococcus RepID=Y1084_STRS2 Length = 246 Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 40/102 (39%), Positives = 64/102 (62%) Query: 55 EREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGET 114 ++E LYL+ QNQ+I+ +T+F G++NR+ PRE++ A+ A ++I+ HNHPSG Sbjct: 122 KQEHLVALYLNTQNQIISQKTIFIGSVNRSIAEPREILHYAVKCMATSIIIVHNHPSGSV 181 Query: 115 TPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHG 156 PS+ D T+ L + + + + + DHLIVG + YSF E Sbjct: 182 QPSRNDLLFTENLKESCEKLGLVLLDHLIVGNKDYYSFREES 223 >UniRef50_Q6MR78 Putative DNA repair protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MR78_BDEBA Length = 170 Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 42/100 (42%), Positives = 64/100 (64%) Query: 57 EEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTP 116 EE V+ LD+Q L+ E LF GT++ +HPR++ + + NA++ ILAHNHPS P Sbjct: 55 EELWVIALDSQMNLVLKEMLFRGTVDFCMIHPRDIFRCLVQANASSFILAHNHPSQNVLP 114 Query: 117 SQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHG 156 S+ D LT+R+ Q+ Q+ +I + DHL+V +S A+HG Sbjct: 115 SEQDLILTRRIHQLAQMFEIPLNDHLVVCENNYFSMADHG 154 >UniRef50_C0GMV6 DNA repair protein RadC n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GMV6_9DELT Length = 226 Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 42/102 (41%), Positives = 65/102 (63%) Query: 57 EEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTP 116 EEF + +DN+N+LI E + GT+++ V PRE++ AL A+ VIL HNHP G+ P Sbjct: 125 EEFWAIMVDNKNRLIDFEKMSRGTVDQAPVFPREILTVALEKRASGVILLHNHPGGDPHP 184 Query: 117 SQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 S D+ LT+++ +V + +R+ DH+I+ +SF EHG L Sbjct: 185 SFQDRELTRKIREVSTALGVRLLDHVIISEDSFFSFQEHGFL 226 >UniRef50_C4V569 DNA repair protein RadC n=2 Tax=Selenomonas RepID=C4V569_9FIRM Length = 225 Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 48/103 (46%), Positives = 65/103 (63%) Query: 56 REEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETT 115 RE F VL L +N+++ + TGT+ T VHPREV + A+ +AA +I+AHNHPSG+ Sbjct: 123 REHFFVLPLSAKNEVLMIADVSTGTLTNTLVHPREVFEPAIRCSAAHIIIAHNHPSGDPA 182 Query: 116 PSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 PS D LT+ L + L+ I V DH+IV +SFAE GLL Sbjct: 183 PSAEDHRLTRSLHEAGALLGIPVADHVIVARDGFFSFAEAGLL 225 >UniRef50_Q1LP02 DNA repair protein RadC n=2 Tax=Burkholderiales RepID=Q1LP02_RALME Length = 138 Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 49/102 (48%), Positives = 64/102 (62%) Query: 9 GEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQN 68 G P D I A R + + G AFTS AV+++LR +A E E F VL+LD ++ Sbjct: 19 GRYRPADADQILEAARQVIEQKMQRGEAFTSPEAVKDYLRAKLAGFEHEVFAVLFLDTRH 78 Query: 69 QLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHP 110 +LI + +F GTI+ EVHPREVVK+AL NAAAVI+AH P Sbjct: 79 RLIDYVEMFHGTIDAAEVHPREVVKQALRLNAAAVIVAHYVP 120 >UniRef50_C7M9C6 DNA repair protein RadC n=1 Tax=Capnocytophaga ochracea DSM 7271 RepID=C7M9C6_CAPOD Length = 225 Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 52/127 (40%), Positives = 73/127 (57%) Query: 32 EPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREV 91 EP H V ++ + L EEF VLYL++ N++I LF+G I T V R + Sbjct: 99 EPQPKIEVAHNVFVLMQPLIGELPHEEFWVLYLNSTNRVIHKARLFSGGITHTTVDVRLL 158 Query: 92 VKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYS 151 K AL A A+IL HNHPSG TTPS+ D LTQR+ +++DI++ DH+IV ++ S Sbjct: 159 FKTALEQGAIALILVHNHPSGSTTPSKEDIELTQRVKTAGEMLDIKLLDHVIVTEKEYLS 218 Query: 152 FAEHGLL 158 F + L Sbjct: 219 FLDERLF 225 >UniRef50_D2EK65 DNA repair protein n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EK65_PEDAC Length = 225 Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 41/103 (39%), Positives = 63/103 (61%) Query: 56 REEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETT 115 +E +L LD +NQ+ +F G +N EVHPRE++ L +++ IL HNHPSG Sbjct: 120 QEHLVLLCLDTKNQIKQERVIFKGGLNSAEVHPREIMAEVLRYSSNGFILVHNHPSGNVE 179 Query: 116 PSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 PS D T+++ ++ L+ IR+ DHLIVG + +S AE+ +L Sbjct: 180 PSMNDVAFTKKMKKIGDLMGIRLIDHLIVGDQTYWSAAENRVL 222 >UniRef50_B2V8J4 DNA repair protein RadC n=5 Tax=Aquificales RepID=B2V8J4_SULSY Length = 229 Score = 89.0 bits (219), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 43/128 (33%), Positives = 72/128 (56%), Gaps = 1/128 (0%) Query: 31 HEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPRE 90 H + TS +L+ ++ +E LYL++ N LIA E + G++N V PR+ Sbjct: 103 HAEKIKITSVSDAFNYLKF-LSKETQEHMVALYLNSSNHLIAQEVIAKGSLNVVRVLPRD 161 Query: 91 VVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIY 150 ++ A+ N +I++HNHP+ + TPSQ D T++L + + + DH+IVG + Y Sbjct: 162 ILYYAIKHNCNGIIISHNHPNNDPTPSQEDIEFTKKLQTLANELGFDLLDHIIVGKKDFY 221 Query: 151 SFAEHGLL 158 SFA+ GL+ Sbjct: 222 SFAKAGLI 229 >UniRef50_Q2GEH3 DNA repair protein RadC n=2 Tax=Neorickettsia RepID=Q2GEH3_NEOSM Length = 236 Score = 88.6 bits (218), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 48/142 (33%), Positives = 79/142 (55%) Query: 17 RLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETL 76 R ++ +++A+ R S +V ++LRL + E RVL+L+ + LI Sbjct: 95 RTVRESMKAILRKDLTSRTTLKSWKSVVDYLRLSIGNKPVETIRVLFLNKKYTLIREYVQ 154 Query: 77 FTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDI 136 G + T + RE++K+ L A+A+++AHNHPSG PSQ D +T +L ++ Q VD+ Sbjct: 155 ELGAADHTPLCMREIIKKCLTCGASAMVIAHNHPSGNPLPSQEDLLITGKLKKICQKVDV 214 Query: 137 RVPDHLIVGGRQIYSFAEHGLL 158 ++ DH IV +SF +GLL Sbjct: 215 QLVDHFIVTPHDHFSFVVNGLL 236 >UniRef50_C7VI58 DNA repair protein RadC n=3 Tax=Bacilli RepID=C7VI58_ENTFA Length = 117 Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 46/105 (43%), Positives = 68/105 (64%), Gaps = 1/105 (0%) Query: 55 EREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGET 114 +RE F V+ L+ +N ++A G++N + VHPREV K A+ NAA+VI+AH HPS + Sbjct: 13 DREVFFVMCLNTRNNVVAVLRCHVGSLNASLVHPREVFKSAILNNAASVIVAHQHPSDDI 72 Query: 115 TPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIY-SFAEHGLL 158 TPS+ D +T+RLV+ +L+DI V DHL+V + S E G + Sbjct: 73 TPSKEDINVTKRLVEAGKLLDIEVLDHLVVNSDNGFTSLKERGYI 117 >UniRef50_B0MUL4 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MUL4_9BACT Length = 214 Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 47/122 (38%), Positives = 69/122 (56%) Query: 37 FTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRAL 96 S++ V R + ++ EE LYL+ N+++ + + G + T V R V+KRAL Sbjct: 92 IGSSNDVVRIFRPLLTEMKHEECWCLYLNTGNRIVERQRVSQGGVQATVVDHRLVIKRAL 151 Query: 97 HFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHG 156 A +IL HNHPSG PS+ DK LT+++ + L DIR+ DHLI+ YSF + G Sbjct: 152 ELLATQIILVHNHPSGAALPSEQDKILTKKIAEAAALFDIRLLDHLIIARGGEYSFRQSG 211 Query: 157 LL 158 LL Sbjct: 212 LL 213 >UniRef50_A5VEU8 DNA repair protein RadC n=4 Tax=Sphingomonadales RepID=A5VEU8_SPHWW Length = 230 Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 44/122 (36%), Positives = 75/122 (61%) Query: 37 FTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRAL 96 + A+ ++LR MA E RVL+L+++N L+ E + G++++ V+ RE+++RAL Sbjct: 109 LSDWQALADYLRADMAHRAVERVRVLHLNSKNVLVRDELVSEGSVDQAAVYVREIIRRAL 168 Query: 97 HFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHG 156 +AA+I+ HNHPSG+ PS+ D LT+ L+ + + I + DH++VG R S G Sbjct: 169 ELGSAALIIVHNHPSGDPQPSRQDVELTRELIAAAKPLGIAIHDHVVVGTRGQASLRALG 228 Query: 157 LL 158 L+ Sbjct: 229 LI 230 >UniRef50_C4FYP9 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4FYP9_ABIDE Length = 240 Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 45/108 (41%), Positives = 68/108 (62%) Query: 50 HMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNH 109 M + E +L LD + +LI T+ GTIN++ + PREV +AL + A ++L HNH Sbjct: 120 EMRHFKEEHVVLLLLDIKCRLIKELTISIGTINQSFLRPREVFIQALKYEAVNLVLIHNH 179 Query: 110 PSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGL 157 PSG+ TPS+AD +T ++++V +LV I + DH+I+G SF E GL Sbjct: 180 PSGDPTPSKADIIVTDKILEVSELVGIPLVDHIIIGDCCYVSFREKGL 227 >UniRef50_Q64AS5 DNA repair proteins n=1 Tax=uncultured archaeon GZfos29E12 RepID=Q64AS5_9ARCH Length = 403 Score = 88.6 bits (218), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 39/93 (41%), Positives = 64/93 (68%) Query: 55 EREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGET 114 ++E F L LD++N+LI + + GT++ + VHPREV K A+ +AA VIL HNHPSG+ Sbjct: 301 KKEHFYALLLDSKNKLIKKDLVSVGTLDNSLVHPREVFKEAIKNSAAGVILVHNHPSGDP 360 Query: 115 TPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGR 147 PS+ D +TQ++ + +++I+V DH+I+ + Sbjct: 361 EPSENDVEITQKIAKAGNILNIKVLDHVIIAEK 393 >UniRef50_C9KJC8 DNA repair protein RadC n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KJC8_9FIRM Length = 158 Score = 88.2 bits (217), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 50/129 (38%), Positives = 74/129 (57%), Gaps = 6/129 (4%) Query: 28 RHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVH 87 R LH P A +V + + E F V+ +D++++ + + GT+N + VH Sbjct: 27 RTLHSPEDAAEFIKSV-----IDFDTVPCELFIVVPIDSKSKPLCVTVVTKGTLNCSLVH 81 Query: 88 PREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGR 147 PREV + L NAAA + HNHPSG+ TPS+ DK +T+RLV+ ++D+ V DH+IVG Sbjct: 82 PREVFQPCLLANAAACFVFHNHPSGDVTPSREDKAITERLVKAGHILDVPVLDHIIVGD- 140 Query: 148 QIYSFAEHG 156 YSF G Sbjct: 141 NFYSFRTDG 149 >UniRef50_A5URD0 UPF0758 protein RoseRS_0767 n=7 Tax=Bacteria RepID=Y767_ROSS1 Length = 233 Score = 88.2 bits (217), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 38/113 (33%), Positives = 75/113 (66%) Query: 45 EWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVI 104 + +++ M+ L++E+ R + LD +N++ +T++ G+++ + V E+ K + N+A++I Sbjct: 116 QLMQIEMSHLDQEQLRAICLDTKNRVQKIQTVYIGSLHTSMVRIGEIFKEPIRLNSASII 175 Query: 105 LAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGL 157 + HNHPSG+ TPS D +T+++++ +L+DI V DHL++G + S E GL Sbjct: 176 VVHNHPSGDPTPSPEDVVVTRQIIEAGRLLDIDVLDHLVIGAGRFVSMRERGL 228 >UniRef50_C7GE95 DNA repair protein RadC n=2 Tax=Roseburia RepID=C7GE95_9FIRM Length = 243 Score = 87.8 bits (216), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 43/124 (34%), Positives = 69/124 (55%) Query: 33 PGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVV 92 P V T+ + ++ H+ +E V DN+ + + L G+ N T V PREV Sbjct: 116 PNVCMTNPRTIADYYMEHLRHENKEHLIVCMFDNKCHMKGDKLLSVGSANETIVSPREVF 175 Query: 93 KRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSF 152 + A++ +AA +IL HNHPSG PS AD +T+R++ QL+ I + DH+I+G +S+ Sbjct: 176 ETAINCHAAHLILVHNHPSGIPEPSHADDVVTKRILNCGQLMGIPLSDHVIIGDHSYFSY 235 Query: 153 AEHG 156 E+ Sbjct: 236 RENN 239 >UniRef50_C8WXL6 DNA repair protein RadC n=3 Tax=Alicyclobacillus acidocaldarius RepID=C8WXL6_ALIAD Length = 233 Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 38/105 (36%), Positives = 70/105 (66%) Query: 54 LEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGE 113 L++E F L LD +++++A +T G+++ + VHPRE+ +RA+ +A++++ HNHPSG+ Sbjct: 125 LKKEHFVTLLLDTKHRVLAEDTSSVGSLDASIVHPREIFRRAIRISASSILCIHNHPSGD 184 Query: 114 TTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +PS D +T+RLV+ +++ I V DH+++G + S G L Sbjct: 185 PSPSPEDIAVTKRLVEAGRVLGIEVLDHIVIGDGRFVSLRAEGYL 229 >UniRef50_Q7UL21 DNA repair protein n=4 Tax=Bacteria RepID=Q7UL21_RHOBA Length = 319 Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 49/126 (38%), Positives = 74/126 (58%), Gaps = 4/126 (3%) Query: 33 PGVAFTSTHAVREWLRLHMAALE----REEFRVLYLDNQNQLIAHETLFTGTINRTEVHP 88 P V TST E+ A L +EEF ++ LD +++ I + GT++ + VHP Sbjct: 193 PIVKITSTTEATEYCAQKFAYLAGDAVQEEFHIVTLDTKHKPIRTHRITVGTLDSSLVHP 252 Query: 89 REVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQ 148 REV + A+ AAAV+L HNHPSG+ TPS+ D +T+RL + +L+ I V DH++V ++ Sbjct: 253 REVFRPAIRDAAAAVLLVHNHPSGDPTPSREDHAVTERLTEAGKLIGITVLDHIVVAKQR 312 Query: 149 IYSFAE 154 S E Sbjct: 313 CLSLRE 318 >UniRef50_C8N8A0 DNA repair protein RadC n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N8A0_9GAMM Length = 224 Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 53/135 (39%), Positives = 77/135 (57%) Query: 22 ALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTI 81 A R + + +P +F + VR++L + E F VL+L+ Q+ IA E L G Sbjct: 88 ARRFMREEMRQPSWSFKTAADVRDYLLMQFKGQALEAFGVLFLNQQHGFIAFERLAAGAA 147 Query: 82 NRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDH 141 + V R+++ ALH +AAAVILAHNHP+G PS D+ +T+ L L L+DIR+ DH Sbjct: 148 AKVPVPVRQLIASALHHHAAAVILAHNHPAGSGAPSAEDRDVTRHLDDALALMDIRLLDH 207 Query: 142 LIVGGRQIYSFAEHG 156 IV G ++ S E G Sbjct: 208 FIVAGNEMVSMRERG 222 >UniRef50_A9NF52 DNA repair protein n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NF52_ACHLI Length = 217 Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 40/116 (34%), Positives = 70/116 (60%) Query: 37 FTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRAL 96 T + V L+ M+ L +E VL LD + L+ +ET++ GT + +V +++ K A+ Sbjct: 94 ITESSEVYHLLKEDMSYLRKEHLIVLCLDIKGNLLKNETIYMGTTSSIQVSVKDLFKSAV 153 Query: 97 HFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSF 152 A +I+ HNHPSG++TPSQAD LT+ + +++ I + DH+I+G + +S+ Sbjct: 154 RIGAFGIIVVHNHPSGDSTPSQADDKLTKLIKNAGEVLSIELIDHIIIGRNEFFSY 209 >UniRef50_Q4EGF4 DNA repair protein RadC n=7 Tax=Bacilli RepID=Q4EGF4_LISMO Length = 147 Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 46/105 (43%), Positives = 65/105 (61%), Gaps = 1/105 (0%) Query: 55 EREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGET 114 +RE F V+ L+ +N ++A G++N + VHPREV K A+ N A+VILAH HPSG+ Sbjct: 43 DREVFFVMCLNTKNNVVAVHRCHVGSLNSSIVHPREVFKSAILNNVASVILAHQHPSGDI 102 Query: 115 TPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIY-SFAEHGLL 158 PS D +T+RLV+ +L+ I V DHLIV + S E G + Sbjct: 103 KPSMEDINVTKRLVEAGKLLGIEVLDHLIVNSDNSFTSLKERGYI 147 >UniRef50_A8ZUS2 DNA repair protein RadC n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZUS2_DESOH Length = 253 Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 47/103 (45%), Positives = 71/103 (68%) Query: 56 REEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETT 115 RE F +++D +N++I ETL G++ + V+PREVV RAL +AAA+I HNHPSGE Sbjct: 126 RETFAAIFMDAKNRVIVVETLSEGSLTESPVYPREVVARALAHHAAALICCHNHPSGEPE 185 Query: 116 PSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 PS+ D +T++LV + + I V +H+IVG R +SFA++G + Sbjct: 186 PSRQDIAITRKLVMACKTMGITVHEHIIVGERGHFSFADNGYM 228 >UniRef50_B9ECC3 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9ECC3_MACCJ Length = 150 Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 45/131 (34%), Positives = 75/131 (57%) Query: 28 RHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVH 87 R + + S V ++ + + RE+F ++ L+ +N++ T+F GTIN + +H Sbjct: 20 RKTRDERIKVKSPDNVADFCKKLIGNSVREKFLLVGLNTKNEITFVYTVFIGTINMSPIH 79 Query: 88 PREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGR 147 PREV + A+ + A++ILAH HPS + TPS D+ T+R + +L+ I V DH+IV Sbjct: 80 PREVFQVAILNSCASIILAHCHPSDDPTPSSEDREATKRFEECGELLGIPVLDHIIVTES 139 Query: 148 QIYSFAEHGLL 158 +SF E+ L Sbjct: 140 SYFSFRENNLF 150 >UniRef50_B0MF12 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=B0MF12_9FIRM Length = 282 Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 44/106 (41%), Positives = 64/106 (60%) Query: 53 ALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSG 112 +++RE F VL L Q+I GT+N + PRE+ K ++ NAA+VIL HNHPSG Sbjct: 34 SVDRELFFVLNLKTNGQVINVNIASMGTLNSCILSPREIFKASILSNAASVILMHNHPSG 93 Query: 113 ETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 + TPS+ D +T+RLV +L+ I V DH+I+G S E ++ Sbjct: 94 DCTPSKQDVLMTKRLVACGELIGITVLDHVILGKETYLSMKEANMM 139 >UniRef50_A9BIK5 DNA repair protein RadC n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BIK5_PETMO Length = 222 Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 36/103 (34%), Positives = 65/103 (63%) Query: 51 MAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHP 110 M L E R ++LD++ +I + + GT+N + HPR++ + A+ +NA + IL HNHP Sbjct: 112 MIYLSTETVRAIFLDSKLHIITIKDISNGTVNMSIAHPRDIFREAIMYNAVSFILVHNHP 171 Query: 111 SGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFA 153 SG+ TPS D+ +T++++ +++ I + DH+I+G +SF Sbjct: 172 SGDPTPSMHDRDITKKIMDSGEILGINMNDHIIIGKDSYFSFT 214 >UniRef50_D0MFA0 DNA repair protein RadC n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MFA0_RHOM4 Length = 245 Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 44/105 (41%), Positives = 65/105 (61%) Query: 54 LEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGE 113 L+RE F+++ L+ N +IA T+ G + + V PR V +RA+ NAA +I HNHPSG Sbjct: 140 LKREVFKIVLLNTANYIIADYTISEGGLAASIVEPRAVFQRAILDNAAGIICLHNHPSGN 199 Query: 114 TTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 PS D +T++LV+ +L+ I V DH+I+ G S AE GL+ Sbjct: 200 PEPSAEDIRITRQLVEAGRLLGIPVHDHIIIAGTTYTSLAERGLM 244 >UniRef50_C9LCX8 DNA repair protein RadC n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LCX8_9BACT Length = 228 Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 42/102 (41%), Positives = 62/102 (60%) Query: 57 EEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTP 116 EEF ++L+ + QL++ + G + T V R + +AL A A+ + HNHPSG P Sbjct: 126 EEFHAMFLNRRLQLVSEALIGRGGLTETTVDVRLLFGKALEAKATALAICHNHPSGNPRP 185 Query: 117 SQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 SQAD LTQ++ Q +L+DIR+ DH+IV + YS+ E G L Sbjct: 186 SQADDRLTQKVAQAARLLDIRLVDHIIVADKCYYSYQEEGKL 227 >UniRef50_Q8DI83 UPF0758 protein tlr1707 n=31 Tax=Cyanobacteria RepID=Y1707_THEEB Length = 250 Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 44/98 (44%), Positives = 63/98 (64%) Query: 57 EEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTP 116 E F VL LD +++L+ + GT T HPRE+ + A+ NA+ +I+AHNHPSG +P Sbjct: 138 ERFAVLLLDVRHRLLGSHVITVGTATETLAHPREIFREAVRRNASRLIIAHNHPSGNLSP 197 Query: 117 SQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAE 154 SQAD LT++++Q QL++I V DHLI+G S E Sbjct: 198 SQADLDLTKQILQAGQLMEIPVLDHLILGNGDYQSLRE 235 >UniRef50_Q6MAB0 UPF0758 protein pc1765 n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Y1765_PARUW Length = 231 Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 43/103 (41%), Positives = 64/103 (62%) Query: 56 REEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETT 115 RE F ++ D + LI +E + G++++T VHPREV A+ AA++I+ HNHPSG+ Sbjct: 127 REIFMAIFQDTKGYLITYEVISIGSLSQTLVHPREVFYSAIRHKAASLIVVHNHPSGDPM 186 Query: 116 PSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 PS D LTQ L++ +L+ I + DHLI+G SF + LL Sbjct: 187 PSNQDLKLTQILLEGSRLLGIPLRDHLIIGKNSYVSFKDQNLL 229 >UniRef50_UPI0001C34E02 DNA repair protein RadC n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001C34E02 Length = 243 Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 40/123 (32%), Positives = 70/123 (56%) Query: 36 AFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRA 95 +F ++ + M +E+EE ++ + +N LI LF GT+N + RE+ A Sbjct: 121 SFDGPESIAAFYMEDMRHMEQEELHLMMFNTKNMLIRESCLFRGTVNASVASAREIFIEA 180 Query: 96 LHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEH 155 L ++A + L HNHPSG+ +PS D LT+++ Q +L+ + + DH+I+G +SF E Sbjct: 181 LRYHAVRLALVHNHPSGDPSPSGEDIRLTRQVAQAGELLGVTLLDHVIIGDNSYFSFKER 240 Query: 156 GLL 158 G++ Sbjct: 241 GII 243 >UniRef50_Q1DAY3 DNA repair protein RadC n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1DAY3_MYXXD Length = 241 Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 46/108 (42%), Positives = 64/108 (59%) Query: 51 MAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHP 110 + AL RE F VL + +N L+ + GT+N V PREV AL A +++LAHNHP Sbjct: 116 LGALRREVFHVLCFNARNVLVHDARVAEGTMNTCPVDPREVFAAALTSRATSIVLAHNHP 175 Query: 111 SGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 SG+ PS D LT+ LV QL++I+V DH+++G S E GL+ Sbjct: 176 SGDPEPSVQDLGLTRHLVAGAQLLNIKVLDHVVMGDGGYVSMLERGLM 223 >UniRef50_A6GHT1 DNA repair protein RadC n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GHT1_9DELT Length = 260 Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 43/113 (38%), Positives = 66/113 (58%) Query: 46 WLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVIL 105 +LR + ERE F ++ LD + +++ T+ G++ R EVHPREV + + A +L Sbjct: 132 FLRSLLGDAEREHFMIIGLDARQRVLLVRTIAVGSLTRVEVHPREVFRPLVRAGAHTCLL 191 Query: 106 AHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 HNHPSG+ PS+AD LT R+ + + + I V DH++V S AE GL+ Sbjct: 192 VHNHPSGDARPSEADIELTARMTDIGRFLGIPVLDHVVVSANGFVSLAELGLV 244 >UniRef50_A7HJG0 DNA repair protein RadC n=3 Tax=Thermotogaceae RepID=A7HJG0_FERNB Length = 225 Score = 85.9 bits (211), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 45/137 (32%), Positives = 78/137 (56%), Gaps = 9/137 (6%) Query: 16 RRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHET 75 +RL++ LD L P F + M + +E RV++LD + ++I + Sbjct: 86 KRLVKEETVILDPKLTSPENVFQYC--------IDMQSYPQEIVRVIFLDTKLKVIGSKD 137 Query: 76 LFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVD 135 + GTIN + HPR++ + A+ ++ +ILAHNHPSG+ TPS+ D LT+++ + +L+ Sbjct: 138 VSKGTINSSMAHPRDIFREAILRSSTGIILAHNHPSGDPTPSKDDIELTKKIKKAGELLG 197 Query: 136 IRVPDHLIVGGRQIYSF 152 I + DH+I+ G+ YS Sbjct: 198 INLHDHVII-GQTFYSL 213 >UniRef50_Q03EP2 DNA repair protein n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03EP2_PEDPA Length = 219 Score = 85.9 bits (211), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 42/99 (42%), Positives = 60/99 (60%) Query: 56 REEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETT 115 +E VL LD +NQ+ +F G +N EVHPRE++ L +A + +L HNHPSG Sbjct: 117 QEHLLVLCLDTKNQIKREIVVFKGGLNSAEVHPREIMVEVLRVSANSFVLIHNHPSGNIE 176 Query: 116 PSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAE 154 PS D T+++ +V L+ IR+ DHLIVG + +S AE Sbjct: 177 PSTNDLAFTKKMKKVGDLMGIRLIDHLIVGDQSYWSAAE 215 >UniRef50_Q3AF80 UPF0758 protein CHY_0341 n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Y341_CARHZ Length = 226 Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 40/116 (34%), Positives = 67/116 (57%) Query: 37 FTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRAL 96 F + V +LR + ++E+ VLYL+ +NQL + G +N V P ++ + A+ Sbjct: 105 FLNPDDVYNYLRYKIGHKKQEQVVVLYLNTKNQLCGENIVAIGGVNHAGVSPGDIFREAV 164 Query: 97 HFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSF 152 A AVI+AHNHPSG+ TPS+ D T R+ + +++ I++ DH+I+G + S Sbjct: 165 KIGAYAVIIAHNHPSGDPTPSKEDIDFTGRVKKASEILGIKLLDHIILGENKYISM 220 >UniRef50_UPI0001BC32AB DNA repair protein RadC n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC32AB Length = 227 Score = 85.5 bits (210), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 43/122 (35%), Positives = 69/122 (56%) Query: 37 FTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRAL 96 F ++ ++ + LE E F VL L+ + +LI + L GT+N T + REV + AL Sbjct: 106 FNTSKDAADYCMEELRHLEYECFMVLLLNTKCELINEKILSMGTVNYTCITSREVYRYAL 165 Query: 97 HFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHG 156 A +I+ HNHPSG+ TPS+ D T++L + +LV I + DH+I+G + S E Sbjct: 166 SKGAVYIIVVHNHPSGDPTPSREDSLCTKKLKEAGELVGIPLIDHIIIGDNRYISLKEQD 225 Query: 157 LL 158 ++ Sbjct: 226 MI 227 >UniRef50_C2KVW9 Possible DNA repair protein RadC n=1 Tax=Oribacterium sinus F0268 RepID=C2KVW9_9FIRM Length = 229 Score = 85.5 bits (210), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 46/135 (34%), Positives = 73/135 (54%) Query: 22 ALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTI 81 A R +R + E +F S +V ++ + + L EE VL+LD + QL+ L G+ Sbjct: 93 AKRIWNRKIREEVQSFRSPGSVLQYFKEELRHLSYEEVHVLFLDTKAQLLKDFLLSKGSS 152 Query: 82 NRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDH 141 N + + RE+ AL + IL HNHPSG+ PS+ D+ T+ + + + + I + DH Sbjct: 153 NASILSGREIFMEALRAASVCFILVHNHPSGDPHPSREDERATEEIYKAGEYLGIHLMDH 212 Query: 142 LIVGGRQIYSFAEHG 156 +I+G Q YSF E G Sbjct: 213 IIIGDNQYYSFKEQG 227 >UniRef50_B7RA56 DNA repair protein RadC n=1 Tax=Carboxydibrachium pacificum DSM 12653 RepID=B7RA56_9THEO Length = 208 Score = 85.1 bits (209), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 40/86 (46%), Positives = 60/86 (69%) Query: 71 IAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQV 130 IA ET+ G++N + VHPREV K A+ +A+++IL HNHPSG+ TPS+ D +T+RLV+ Sbjct: 118 IAIETISIGSLNTSIVHPREVFKAAIERSASSIILVHNHPSGDPTPSREDVEVTKRLVEA 177 Query: 131 LQLVDIRVPDHLIVGGRQIYSFAEHG 156 ++ I+V DH+I+G + S E G Sbjct: 178 GNILGIKVLDHVIIGDGRGISLKEKG 203 >UniRef50_Q1Q559 Similar to DNA repair protein RadC n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q559_9BACT Length = 137 Score = 85.1 bits (209), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 40/103 (38%), Positives = 66/103 (64%) Query: 56 REEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETT 115 +E F + L+N+N + E + GT+ + PREV + A+H A ++L HNHP+G+ Sbjct: 34 KEHFWTVGLNNKNVIQYIELVSLGTLTSAVLGPREVFRLAVHKAIANILLVHNHPAGDPE 93 Query: 116 PSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 PS+ D ++TQRL+ Q++ I+V DH+I+G + YSF E G++ Sbjct: 94 PSKEDVSVTQRLISAGQILGIQVLDHVIIGNPEYYSFKERGII 136 >UniRef50_A6Q5Q5 DNA repair protein RadC n=2 Tax=unclassified Epsilonproteobacteria RepID=A6Q5Q5_NITSB Length = 220 Score = 85.1 bits (209), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 48/140 (34%), Positives = 75/140 (53%), Gaps = 1/140 (0%) Query: 19 IQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFT 78 I A+ R+L + S + V E L+ + ++E F YLD N++ + Sbjct: 82 IVSAVELSKRYLFKQHKTVISANDVYEELKEYFDK-KQEYFIAFYLDGANRICEKRVITI 140 Query: 79 GTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRV 138 GT+N++ VHPREV A+ A++I+AHNHPS TPS+ D +TQ+L Q +++ I + Sbjct: 141 GTLNQSLVHPREVFAPAIESRCASIIVAHNHPSNNLTPSREDILVTQKLKQSGKILGIEL 200 Query: 139 PDHLIVGGRQIYSFAEHGLL 158 DH+I S E G+L Sbjct: 201 LDHIIFSKEGFVSLQEEGIL 220 >UniRef50_C3DWR5 DNA repair protein RadC n=1 Tax=Bacillus thuringiensis serovar sotto str. T04001 RepID=C3DWR5_BACTS Length = 154 Score = 85.1 bits (209), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 45/106 (42%), Positives = 66/106 (62%), Gaps = 3/106 (2%) Query: 55 EREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGET 114 +RE F V+ L+ QN+++A G++N + VHPR+V K A+ N+ ++++AH HPSG Sbjct: 49 DREIFLVMCLNTQNEVVAVHRCHVGSLNSSVVHPRDVFKSAILNNSFSIVVAHQHPSGMV 108 Query: 115 TPSQADKTLTQRLVQVLQLVDIRVPDHLIV--GGRQIYSFAEHGLL 158 PS ADK +++RL +L+ I V D LIV GR YS E G L Sbjct: 109 LPSDADKDVSKRLYDAGKLIGIEVLDSLIVNDAGR-FYSLREKGYL 153 >UniRef50_B2KEG6 DNA repair protein RadC n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KEG6_ELUMP Length = 228 Score = 84.7 bits (208), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 42/110 (38%), Positives = 63/110 (57%) Query: 43 VREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAA 102 V + R +A + E F V+YL +N +I E L G I+R + PR+VV+ AL A Sbjct: 113 VANYCRASLAEHKDEVFEVIYLTVRNTVIGTEVLSVGAIDRASISPRKVVEGALKAKAVG 172 Query: 103 VILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSF 152 ++L HNHPSG+ +PS D + T+ + Q +++ I V DH+IV YS Sbjct: 173 IVLVHNHPSGDPSPSMEDISFTKEVAQAARILGIMVHDHIIVVRGGYYSM 222 >UniRef50_C2MB02 DNA repair protein RadC n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2MB02_9PORP Length = 267 Score = 84.7 bits (208), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 49/123 (39%), Positives = 72/123 (58%), Gaps = 11/123 (8%) Query: 47 LRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILA 106 LR H+ +L+ EE R LYLD ++I E + +G ++ R ++ A+ A+A+ILA Sbjct: 142 LRRHLESLDHEELRCLYLDASGRVIKDELVSSGGVSHAVADLRLILAPAITHYASAIILA 201 Query: 107 HNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIV----------GGRQIY-SFAEH 155 HNHP+G PS D LT+R+ QV + +IR+ DHLI+ G R Y SFA++ Sbjct: 202 HNHPTGHLQPSAEDMDLTKRVKQVASVCNIRLNDHLILGRYHASVTSDGERSHYLSFADN 261 Query: 156 GLL 158 GLL Sbjct: 262 GLL 264 >UniRef50_C0R3D5 DNA repair protein RadC n=2 Tax=Wolbachia RepID=C0R3D5_WOLWR Length = 219 Score = 84.7 bits (208), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 39/114 (34%), Positives = 68/114 (59%) Query: 45 EWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVI 104 ++ + + +E RV+YLD LI GTI+R ++ RE++K+ L +A+++ Sbjct: 106 KYFKTAIGQSRKESLRVIYLDRSGHLIYEYIQDCGTIDRVPLYVREIIKQGLLIDASSIA 165 Query: 105 LAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 ++HNHPSG+T PS+ D+ T L + V +++ DH+IV + +SF + GLL Sbjct: 166 ISHNHPSGDTEPSKEDEDNTLTLAATCENVGMKLIDHIIVTQKSHFSFYDSGLL 219 >UniRef50_Q7UT53 RadC n=1 Tax=Rhodopirellula baltica RepID=Q7UT53_RHOBA Length = 208 Score = 84.7 bits (208), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 44/123 (35%), Positives = 72/123 (58%), Gaps = 4/123 (3%) Query: 37 FTSTHAVREWLRLHMAALE----REEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVV 92 TSTH + R H + L +EEF ++ LD ++++I + GT++ + VHPREV Sbjct: 84 LTSTHKAVAFCRSHFSRLIAEGLQEEFHIVTLDTKHRMIDSHRITVGTLDASLVHPREVF 143 Query: 93 KRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSF 152 + A+ + V+LAHNHPSG+ TPS+ D +TQ+L +V +++ I DH+++ S Sbjct: 144 RPAIRDACSCVLLAHNHPSGDPTPSREDFKVTQQLTEVGKVIGITALDHIVLARENCLSL 203 Query: 153 AEH 155 E Sbjct: 204 REQ 206 >UniRef50_C7TC16 DNA repair protein n=8 Tax=Lactobacillus RepID=C7TC16_LACRG Length = 222 Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 40/103 (38%), Positives = 61/103 (59%) Query: 51 MAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHP 110 A +E +L+LD +NQ+I + + GT++ PR V + AL +A +I+ HNHP Sbjct: 113 FAGANQESMLILFLDVKNQIITEQIVAIGTVDSALADPRVVFREALKLSATNLIMVHNHP 172 Query: 111 SGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFA 153 SG+ +PSQAD+ T R L+ + + DHLI+G + YSFA Sbjct: 173 SGDPSPSQADRDTTTRFQLAAALLGMHLLDHLIIGRQSYYSFA 215 >UniRef50_C5NXB5 DNA repair protein RadC homolog n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXB5_9BACL Length = 257 Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 40/118 (33%), Positives = 70/118 (59%) Query: 35 VAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKR 94 V S ++ +L+ + L +E F VL +D + ++I +F G+++ + VHPREV K Sbjct: 103 VKCDSPQSIANYLKSSLENLTQEVFVVLDIDTKGKIIEKREVFKGSLSMSVVHPREVFKL 162 Query: 95 ALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSF 152 A+ +A++++ HNHPSG+ TPS D T L++V ++V I + DH++V + S Sbjct: 163 AIKNSASSIVCVHNHPSGDATPSIEDIKTTINLMEVGEIVGIEMLDHIVVAKKGYVSI 220 >UniRef50_B5YDI9 DNA repair protein n=2 Tax=Dictyoglomus RepID=B5YDI9_DICT6 Length = 228 Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 39/108 (36%), Positives = 62/108 (57%) Query: 51 MAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHP 110 M L+ E +Y+D +N+ ++ + G +N PR++ K AL N+A +ILAHNHP Sbjct: 121 MFDLKEEHLFCIYMDIKNKCLSKRLIAKGDLNIVYASPRDIFKYALQENSAKIILAHNHP 180 Query: 111 SGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 SG+ TPS+ D T+RL++ +++ I V DHLI+ S E + Sbjct: 181 SGDLTPSEDDVIFTKRLIEAGKILGIEVLDHLIIHNEDYLSLKEKNFI 228 >UniRef50_C7GYN9 DNA repair protein RadC n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GYN9_9FIRM Length = 230 Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 46/133 (34%), Positives = 68/133 (51%), Gaps = 7/133 (5%) Query: 26 LDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTE 85 + R + P F H E LR ++E F + L+ +IA E + G + Sbjct: 99 IKRKIGNPEAIF---HLFHEKLRYE----KKENFYAVMLNTAKHVIAKERISIGGLACAY 151 Query: 86 VHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVG 145 HPREV K A+ A++VIL HNHPSG TPS D +T+RL+ +++ I V DH+I+G Sbjct: 152 AHPREVFKSAIKKAASSVILVHNHPSGCVTPSDEDVLITKRLINAGRIIGIEVIDHIIIG 211 Query: 146 GRQIYSFAEHGLL 158 S + G + Sbjct: 212 NENYLSMKKEGYI 224 >UniRef50_Q7MVX9 UPF0758 protein PG_0894 n=24 Tax=Bacteroidales RepID=Y894_PORGI Length = 227 Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 45/106 (42%), Positives = 65/106 (61%), Gaps = 1/106 (0%) Query: 54 LEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGE 113 L +EE VL L+ ++I+ E L G ++ T R ++ +A+ A+A+ILAHNHPSG Sbjct: 122 LPQEEMWVLLLNQSGKIISMENLSRGGVSETSADVRLIMHKAVSHLASAIILAHNHPSGT 181 Query: 114 TTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIY-SFAEHGLL 158 PS+ D LTQR+ + L+ R+ DHLI+G Y SFA+ GLL Sbjct: 182 VRPSEQDIQLTQRVQKAATLLGFRLNDHLIIGDDGAYFSFADEGLL 227 >UniRef50_O67541 UPF0758 protein aq_1610 n=2 Tax=Aquificaceae RepID=Y1610_AQUAE Length = 231 Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 38/103 (36%), Positives = 61/103 (59%) Query: 56 REEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETT 115 RE LYLD N+L+ E + G +N P++++ +A+ +A +I+AHNHP GE + Sbjct: 129 RESLIALYLDLSNRLLDWEVVAIGNVNTVFSKPKDILFKAVKLSANGIIIAHNHPQGEPS 188 Query: 116 PSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 PS D T+RL + +L+ + DHLI+ + +SF E G+L Sbjct: 189 PSNEDLNFTERLKKACELLGFELLDHLILSEGRYFSFREEGVL 231 >UniRef50_A4ITX8 DNA repair protein RadC n=1 Tax=Geobacillus thermodenitrificans NG80-2 RepID=A4ITX8_GEOTN Length = 126 Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 42/123 (34%), Positives = 71/123 (57%), Gaps = 8/123 (6%) Query: 37 FTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRAL 96 F +++WL ++ + L+ +N+++A G++N + VHPREV K A+ Sbjct: 10 FLCDRTLQKWLNFKLS-------NTMCLNTKNEVVAVHRCHIGSLNASIVHPREVFKAAI 62 Query: 97 HFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIY-SFAEH 155 NAA++I+AH HPSG+ TPS+ D +T+RL + +++ I V DHL++ + Y S E Sbjct: 63 LNNAASIIVAHQHPSGDVTPSKEDVEMTKRLAEAGRILGIEVLDHLVINYKAEYTSLKER 122 Query: 156 GLL 158 G Sbjct: 123 GFF 125 >UniRef50_A3ER13 DNA repair protein (RadC) n=3 Tax=Leptospirillum RepID=A3ER13_9BACT Length = 237 Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 43/104 (41%), Positives = 65/104 (62%) Query: 55 EREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGET 114 ++E F VL LD +++L + G+++ T VHPRE + A+ +AAAV+ HNHPSG+ Sbjct: 128 KKESFWVLLLDQRHRLQNAVRISEGSLSMTLVHPREAFQPAIRDSAAAVLFVHNHPSGDP 187 Query: 115 TPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 PS D +LT+RL + +L+ IRV DH+++G S E G L Sbjct: 188 EPSSDDWSLTERLKECGELLGIRVLDHVVLGDHAWVSLEERGGL 231 >UniRef50_A5EYF9 Response regulator receiver domain protein-DNA repair protein RadC n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EYF9_DICNV Length = 401 Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 47/136 (34%), Positives = 75/136 (55%), Gaps = 3/136 (2%) Query: 24 RALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETL---FTGT 80 R + L P F+S VR +L +H L EE +L L+ +NQ +A+E + F Sbjct: 264 RFIAADLQLPEWQFSSADDVRNFLLMHYKGLGFEEVAILLLNQKNQYLAYERIGQAFGSE 323 Query: 81 INRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPD 140 +++ V R++VK L +AAAV+L HNHP+ T S++D T+ + L+ + +R+ D Sbjct: 324 VSQVNVSCRKLVKSVLDSDAAAVVLVHNHPAQSTELSESDLQTTKFIENFLKPLGVRLLD 383 Query: 141 HLIVGGRQIYSFAEHG 156 H +V G Q+ S E G Sbjct: 384 HFVVAGNQVISLRETG 399 >UniRef50_A9IG14 Putative DNA repair protein RadC n=1 Tax=Bordetella petrii DSM 12804 RepID=A9IG14_BORPD Length = 148 Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 41/90 (45%), Positives = 61/90 (67%) Query: 18 LIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLF 77 +IQ+A+ L+R + + G + AVR++LRL + A E F ++LD+ +Q++A+E LF Sbjct: 24 IIQQAIALLERRIFKVGPCLSGPAAVRDYLRLKLVAEPNEVFAAVFLDSMHQVLAYEPLF 83 Query: 78 TGTINRTEVHPREVVKRALHFNAAAVILAH 107 GTIN T V+PR VV+R L AAAV+LAH Sbjct: 84 RGTINSTAVYPRVVVQRVLELKAAAVVLAH 113 >UniRef50_D2RM81 DNA repair protein RadC n=2 Tax=Acidaminococcus RepID=D2RM81_ACIFE Length = 220 Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 60/162 (37%), Positives = 91/162 (56%), Gaps = 6/162 (3%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGV-AFTSTHAVREWLRLHMAALEREE- 58 +++L+ + G + P +I AL L R L G F + H + L M L E Sbjct: 61 VRELTRISG-IGPAKATVILAALE-LGRRLAGAGTRPFRTIHCPEDGAMLVMPRLRYENH 118 Query: 59 --FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTP 116 F V+ L+++ ++I E + G++N + VHPRE AL +AAA++ HNHPSG+ TP Sbjct: 119 EHFLVVLLNSKGKVIGIEPVSEGSLNASVVHPREAFAPALLHHAAAILAVHNHPSGDPTP 178 Query: 117 SQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 S+ D+ LT+ L +++ I + DHLI+G YSF EHGLL Sbjct: 179 SREDRELTRTLWDTGKVMGIPLVDHLIIGDGVYYSFKEHGLL 220 >UniRef50_A5KLJ1 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=A5KLJ1_9FIRM Length = 233 Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 40/122 (32%), Positives = 67/122 (54%) Query: 37 FTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRAL 96 F+S + ++ M RE ++++L+ + +LI + GTI+ V PRE+ A Sbjct: 110 FSSPRTIADYYMEDMRHRTREILKLIFLNTRCRLIGECNVSEGTIDSALVSPRELFIEAF 169 Query: 97 HFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHG 156 NA +IL HNHP G+ TPS+ D +T+R+ + +L+ IR+ DH+++G S E G Sbjct: 170 KRNAYGIILLHNHPGGDPTPSREDVMITRRIYEAGELLGIRLFDHIVIGDNCFVSMKEKG 229 Query: 157 LL 158 Sbjct: 230 FF 231 >UniRef50_A1BGW3 DNA repair protein RadC n=2 Tax=Chlorobium RepID=A1BGW3_CHLPD Length = 166 Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 41/106 (38%), Positives = 63/106 (59%), Gaps = 1/106 (0%) Query: 54 LEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGE 113 L EE V +L +N + + + GT+N + +HPREV + A+ NA A+IL HNHPSG Sbjct: 60 LPHEELHVFFLSTKNYITGTQLVSRGTLNASLIHPREVFRGAILANANAIILVHNHPSGN 119 Query: 114 TTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQI-YSFAEHGLL 158 PS ADK +T+++ ++ I + DH+I+G +SF + GL Sbjct: 120 PEPSNADKQVTKQIRSSADIIGIELLDHVIIGSNGNHFSFRQEGLF 165 >UniRef50_C1A4H3 DNA repair protein RadC n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A4H3_GEMAT Length = 244 Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 52/102 (50%), Positives = 68/102 (66%) Query: 57 EEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTP 116 EEF V LD Q++L + G +N + VHPREV + A+ AAAVIL HNHPSG+ TP Sbjct: 143 EEFHVAILDAQHRLERDVLITRGLLNSSLVHPREVFREAIAERAAAVILVHNHPSGDPTP 202 Query: 117 SQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 S D+ +T++LV +L+DI V DH+IVG + SFAE GLL Sbjct: 203 SAEDRAVTEQLVAAGRLLDIPVHDHIIVGRGRYVSFAEAGLL 244 >UniRef50_D1R5B1 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R5B1_9CHLA Length = 238 Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 48/117 (41%), Positives = 67/117 (57%), Gaps = 4/117 (3%) Query: 41 HAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNA 100 H V++ L M +E F + D + +I T+ GT+ T VHPREV A+ A Sbjct: 118 HLVKDDLEKAM----QEHFLTILQDVKGYVICSPTVALGTLTATVVHPREVFYPAIRHRA 173 Query: 101 AAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGL 157 A++IL HNHPSG+ TPS+ D +T+ LV V +LV I V DH+I+G + S E G Sbjct: 174 ASLILVHNHPSGDPTPSKEDLDVTKTLVAVGRLVGICVNDHIIIGRDRYVSLREEGF 230 >UniRef50_A6L552 DNA repair protein n=5 Tax=Bacteroidales RepID=A6L552_BACV8 Length = 153 Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 42/103 (40%), Positives = 64/103 (62%) Query: 56 REEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETT 115 +E F+VL+L+ +Q++ + + G I T V R +++ AL N+ A+ILAHNHPSG Sbjct: 51 KEYFKVLFLNQSSQVLGYTLISEGGITDTTVDVRVILQAALLTNSVALILAHNHPSGNLK 110 Query: 116 PSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 PS+ D +T+++ QL+ I V DHLI+ YSFA+ G L Sbjct: 111 PSRQDMEITKQVKNAAQLMRITVIDHLILTDAGYYSFADEGQL 153 >UniRef50_Q65R62 RadC protein n=1 Tax=Mannheimia succiniciproducens MBEL55E RepID=Q65R62_MANSM Length = 111 Score = 82.8 bits (203), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 40/73 (54%), Positives = 52/73 (71%) Query: 37 FTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRAL 96 F ST R +L+ + ERE F VL+LDNQ++LI E +F GTIN +HPRE++K AL Sbjct: 16 FNSTDTARIYLQTALEQREREIFLVLFLDNQHRLIKQEEMFLGTINSAVIHPREIIKTAL 75 Query: 97 HFNAAAVILAHNH 109 + NAAA+ILAHNH Sbjct: 76 YCNAAAMILAHNH 88 >UniRef50_UPI00016B261F DNA repair protein RadC n=2 Tax=candidate division TM7 RepID=UPI00016B261F Length = 214 Score = 82.8 bits (203), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 41/90 (45%), Positives = 58/90 (64%) Query: 55 EREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGET 114 ++E F L LD N+LIA + GT+ + VHPREV A+ AA++I+AHNHPSG Sbjct: 116 KQEYFVCLTLDGANRLIAKRVVTIGTLTASLVHPREVFADAIADRAASIIVAHNHPSGSL 175 Query: 115 TPSQADKTLTQRLVQVLQLVDIRVPDHLIV 144 SQADK +T RL + +L+ I + DH+I+ Sbjct: 176 EASQADKDVTSRLAEAGRLLGITLNDHIII 205 >UniRef50_A8RIH3 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8RIH3_9CLOT Length = 178 Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 53/139 (38%), Positives = 76/139 (54%), Gaps = 9/139 (6%) Query: 21 RALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGT 80 RAL + R +PG+A A W MA +RE VL L+ + + A E G Sbjct: 40 RALYGMTR-FTDPGMA-----AEMVWPLFEMA--DREMALVLSLNTKLEPQALEIAAVGG 91 Query: 81 INRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPD 140 +N + R++ K A+ NAA +I HNHPSG+ PS D+ LT+RL + +++ I + D Sbjct: 92 LNACSIDCRDIFKHAVLNNAAFIICFHNHPSGDPKPSMEDRKLTKRLEECGKILGIPLID 151 Query: 141 HLIVG-GRQIYSFAEHGLL 158 H+IVG G YSF E G+L Sbjct: 152 HIIVGEGPCCYSFKEQGML 170 >UniRef50_C5VLA8 DNA repair protein n=1 Tax=Prevotella melaninogenica ATCC 25845 RepID=C5VLA8_9BACT Length = 147 Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 41/101 (40%), Positives = 60/101 (59%) Query: 56 REEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETT 115 RE +VLYL+ N++IA+ T+ G + T V R +++ AL NA +I AHNHP+G Sbjct: 44 REYAKVLYLNQANEVIAYNTISEGGLTETAVDVRIILQGALLTNATQIIFAHNHPTGNLK 103 Query: 116 PSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHG 156 PS D LT+ L + Q++ IR DH+I+ YS+ E G Sbjct: 104 PSPQDDMLTRELQKACQIMRIRFTDHIIMSVDSYYSYREEG 144 >UniRef50_UPI000185C66E DNA repair protein RadC n=1 Tax=Capnocytophaga sputigena ATCC 33612 RepID=UPI000185C66E Length = 221 Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 48/122 (39%), Positives = 69/122 (56%) Query: 31 HEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPRE 90 HEP + V ++ + L EEF VLYL++ N++I L +G I T V R Sbjct: 98 HEPQPKIEAPRHVFTLMQPLIGDLPHEEFWVLYLNSANRVIHKCRLSSGGITHTTVDIRL 157 Query: 91 VVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIY 150 + K AL A ++IL HNHPSG TTPS+ D LT+R+ +DI++ DH+IV ++ Y Sbjct: 158 LFKNALEQGAVSLILVHNHPSGSTTPSKEDLELTERVRNAGDTLDIKLLDHIIVTEKEYY 217 Query: 151 SF 152 S Sbjct: 218 SI 219 >UniRef50_C9LLN8 DNA repair protein RadC n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLN8_9FIRM Length = 227 Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 40/122 (32%), Positives = 70/122 (57%) Query: 37 FTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRAL 96 F+ AV + + ++E F V +L+ +N+L+ ++ + G+++ V +E ++ AL Sbjct: 106 FSFPEAVASYFMEKLRHEDQEHFIVCFLNTKNRLLGYKEICVGSLDAAPVDIKEAMRWAL 165 Query: 97 HFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHG 156 F A +IL HNHPSG PS AD LT++ + DIR+ DH+I+G + S ++G Sbjct: 166 RFKAHGMILVHNHPSGYPEPSDADINLTRQFRRATSFFDIRLLDHVIIGDGEFASLNKNG 225 Query: 157 LL 158 L+ Sbjct: 226 LV 227 >UniRef50_B2URH1 DNA repair protein RadC n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2URH1_AKKM8 Length = 246 Score = 82.0 bits (201), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 43/120 (35%), Positives = 68/120 (56%), Gaps = 6/120 (5%) Query: 43 VREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAA 102 V ++L M E+E VL LD + +LI + +GT+N + HPR++++ + NA Sbjct: 112 VYDYLTTAMRWKEKETVLVLLLDTKCRLIKPVEISSGTLNESIAHPRDILRPTVIHNAYG 171 Query: 103 VILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVG------GRQIYSFAEHG 156 ILAHNHPSG PS+ D LT+R+ + +L+ +R DH+I+G + YS+ G Sbjct: 172 FILAHNHPSGNPAPSRTDDLLTERVRECSKLLGVRFLDHVIIGKPTETTNKNYYSYNHPG 231 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_B1IPT7 DNA repair protein RadC n=3 Tax=Enterobacteriace... 193 2e-48 UniRef50_P52140 UPF0758 protein yfjY n=148 Tax=Enterobacteriacea... 193 2e-48 UniRef50_C8U0Q3 Predicted DNA repair protein n=21 Tax=Enterobact... 189 2e-47 UniRef50_B3HA66 DNA repair protein RadC n=3 Tax=Enterobacteriace... 183 1e-45 UniRef50_A6SWN0 DNA repair protein RadC n=14 Tax=Proteobacteria ... 182 3e-45 UniRef50_B0T9F0 DNA repair protein RadC n=1 Tax=Caulobacter sp. ... 181 8e-45 UniRef50_A9AE97 DNA repair protein n=8 Tax=Bacteria RepID=A9AE97... 181 8e-45 UniRef50_C6DAT0 DNA repair protein RadC n=5 Tax=Enterobacteriace... 179 2e-44 UniRef50_C5V0A3 DNA repair protein RadC n=1 Tax=Gallionella ferr... 177 1e-43 UniRef50_B2FJW1 UPF0758 protein Smlt0399 n=129 Tax=Proteobacteri... 175 3e-43 UniRef50_B0UUW7 UPF0758 protein HSM_0009 n=10 Tax=Pasteurellacea... 174 1e-42 UniRef50_C5SDF8 DNA repair protein RadC n=1 Tax=Allochromatium v... 173 1e-42 UniRef50_B8KQ45 DNA repair protein RadC n=1 Tax=gamma proteobact... 172 3e-42 UniRef50_A1TJG0 DNA repair protein RadC n=1 Tax=Acidovorax citru... 172 4e-42 UniRef50_A1B4F1 UPF0758 protein Pden_2304 n=44 Tax=Alphaproteoba... 172 4e-42 UniRef50_A7FEQ9 DNA repair protein, RadC family n=4 Tax=Yersinia... 171 6e-42 UniRef50_Q0AJV4 DNA repair protein RadC n=18 Tax=Proteobacteria ... 171 7e-42 UniRef50_Q9KUK8 UPF0758 protein VC_0510 n=11 Tax=Gammaproteobact... 170 1e-41 UniRef50_Q4UPP0 UPF0758 protein XC_3944 n=35 Tax=Proteobacteria ... 170 1e-41 UniRef50_B5EXE3 UPF0758 protein yicR n=116 Tax=Enterobacteriacea... 169 2e-41 UniRef50_Q0ACW7 DNA repair protein RadC n=2 Tax=Proteobacteria R... 169 2e-41 UniRef50_Q04B84 DNA repair protein n=2 Tax=Lactobacillus delbrue... 169 3e-41 UniRef50_A7MQ95 UPF0758 protein ESA_04094 n=32 Tax=Bacteria RepI... 168 4e-41 UniRef50_Q9KR57 UPF0758 protein VC_1786 n=59 Tax=Proteobacteria ... 168 5e-41 UniRef50_Q3A8G4 UPF0758 protein Pcar_0065 n=2 Tax=Bacteria RepID... 167 7e-41 UniRef50_A0R7V6 DNA repair protein RadC n=5 Tax=Desulfuromonadal... 167 7e-41 UniRef50_D2NHT0 Putative phage DNA repair protein n=1 Tax=Escher... 167 8e-41 UniRef50_Q2J299 UPF0758 protein RPB_0700 n=15 Tax=Alphaproteobac... 167 8e-41 UniRef50_A9VIS8 UPF0758 protein BcerKBAB4_4299 n=107 Tax=Firmicu... 167 9e-41 UniRef50_A4SUN7 DNA repair protein n=2 Tax=Aeromonas salmonicida... 167 1e-40 UniRef50_C9Y8Q3 DNA repair protein radC homolog n=1 Tax=Curvibac... 167 1e-40 UniRef50_Q5E054 DNA repair protein RadC n=3 Tax=Gammaproteobacte... 166 2e-40 UniRef50_Q46A65 UPF0758 protein Mbar_A2303 n=2 Tax=Methanosarcin... 166 2e-40 UniRef50_C9L5T8 DNA repair protein RadC n=4 Tax=Clostridiales Re... 166 3e-40 UniRef50_C8VVH2 DNA repair protein RadC n=1 Tax=Desulfotomaculum... 166 3e-40 UniRef50_C6J5M2 DNA repair protein RadC n=1 Tax=Paenibacillus sp... 165 3e-40 UniRef50_D1JB12 Probable DNA repair protein radC homolog n=2 Tax... 165 5e-40 UniRef50_Q47ZW8 DNA repair protein, RadC family protein n=20 Tax... 165 5e-40 UniRef50_Q46XP0 UPF0758 protein Reut_A2732 n=12 Tax=Proteobacter... 165 5e-40 UniRef50_Q3JDF2 DNA repair protein RadC n=4 Tax=Gammaproteobacte... 164 6e-40 UniRef50_B1HKP9 DNA repair protein n=1 Tax=Burkholderia pseudoma... 164 6e-40 UniRef50_C8WXL6 DNA repair protein RadC n=3 Tax=Alicyclobacillus... 164 8e-40 UniRef50_A4W511 UPF0758 protein Ent638_0101 n=3 Tax=Enterobacter... 164 8e-40 UniRef50_C6LCB9 DNA repair protein RadC n=3 Tax=Clostridiales Re... 164 9e-40 UniRef50_Q7VMM9 Conserved possible DNA repair protein n=1 Tax=Ha... 163 1e-39 UniRef50_B0T9R6 DNA repair protein RadC n=4 Tax=Alphaproteobacte... 163 1e-39 UniRef50_B3E339 UPF0758 protein Glov_0523 n=8 Tax=Desulfuromonad... 163 2e-39 UniRef50_Q8UEZ6 UPF0758 protein Atu1607 n=100 Tax=Alphaproteobac... 163 2e-39 UniRef50_Q3BQ28 RadC family DNA repair protein n=5 Tax=Xanthomon... 162 2e-39 UniRef50_Q2SAN5 DNA repair protein n=2 Tax=Hahella chejuensis KC... 162 2e-39 UniRef50_B2UAP0 UPF0758 protein Rpic_2712 n=3 Tax=Burkholderiace... 162 3e-39 UniRef50_Q2G8R8 DNA repair protein RadC n=5 Tax=Sphingomonadales... 162 3e-39 UniRef50_B1YJT0 DNA repair protein RadC n=2 Tax=Exiguobacterium ... 162 3e-39 UniRef50_B9E733 DNA repair protein RadC homolog n=1 Tax=Macrococ... 162 3e-39 UniRef50_A8R890 Putative uncharacterized protein n=1 Tax=Eubacte... 162 4e-39 UniRef50_B9ECC3 Putative uncharacterized protein n=1 Tax=Macroco... 161 6e-39 UniRef50_A6QHJ5 UPF0758 protein NWMN_1555 n=52 Tax=Staphylococcu... 160 1e-38 UniRef50_C7RDS9 DNA repair protein RadC n=3 Tax=Anaerococcus Rep... 160 1e-38 UniRef50_B4X5D3 DNA repair protein RadC n=4 Tax=Alcanivorax sp. ... 160 1e-38 UniRef50_B5YIR9 DNA repair protein n=1 Tax=Thermodesulfovibrio y... 160 1e-38 UniRef50_A5UDB6 UPF0758 protein CGSHiEE_07200 n=30 Tax=Gammaprot... 160 1e-38 UniRef50_A4J365 DNA repair protein RadC n=1 Tax=Desulfotomaculum... 160 1e-38 UniRef50_Q21TE2 UPF0758 protein Rfer_3252 n=12 Tax=cellular orga... 160 1e-38 UniRef50_A1UT15 DNA repair protein, RadC family n=3 Tax=Bartonel... 160 2e-38 UniRef50_C9NPT2 DNA repair protein RadC n=1 Tax=Vibrio coralliil... 160 2e-38 UniRef50_B4Y2Y7 RadC n=1 Tax=Aquabacterium sp. PL1F5 RepID=B4Y2Y... 160 2e-38 UniRef50_Q1AVT6 UPF0758 protein Rxyl_1530 n=3 Tax=Bacteria RepID... 160 2e-38 UniRef50_D0MFA0 DNA repair protein RadC n=1 Tax=Rhodothermus mar... 159 2e-38 UniRef50_Q82ZX1 UPF0758 protein EF_2926 n=40 Tax=Firmicutes RepI... 159 2e-38 UniRef50_A5ZRS6 Putative uncharacterized protein n=5 Tax=Clostri... 159 3e-38 UniRef50_Q2S8K4 DNA repair protein n=1 Tax=Hahella chejuensis KC... 159 3e-38 UniRef50_A5KLJ1 Putative uncharacterized protein n=5 Tax=Clostri... 159 3e-38 UniRef50_B4S9N8 DNA repair protein RadC n=1 Tax=Prosthecochloris... 159 3e-38 UniRef50_A6TQH8 UPF0758 protein Amet_2289 n=54 Tax=cellular orga... 159 4e-38 UniRef50_A1B298 DNA repair protein RadC n=7 Tax=Bacteria RepID=A... 158 5e-38 UniRef50_C5D8D2 DNA repair protein RadC n=4 Tax=Firmicutes RepID... 158 5e-38 UniRef50_C5SK46 DNA repair protein RadC n=1 Tax=Asticcacaulis ex... 158 6e-38 UniRef50_Q0BRK0 DNA repair protein radC n=5 Tax=Alphaproteobacte... 157 9e-38 UniRef50_Q2LSS5 DNA repair protein n=1 Tax=Syntrophus aciditroph... 157 1e-37 UniRef50_C4SWK5 DNA repair protein n=1 Tax=Yersinia intermedia A... 157 1e-37 UniRef50_C4LDH2 DNA repair protein RadC n=2 Tax=Aeromonadaceae R... 157 1e-37 UniRef50_B1I0K4 DNA repair protein radC-like protein n=1 Tax=Lys... 157 1e-37 UniRef50_B9Y7M6 Putative uncharacterized protein n=1 Tax=Holdema... 157 1e-37 UniRef50_C2E2B4 DNA repair protein RadC n=8 Tax=Lactobacillus je... 157 1e-37 UniRef50_A5IM26 UPF0758 protein Tpet_1235 n=7 Tax=Thermotogaceae... 157 1e-37 UniRef50_B1JAY7 DNA repair protein RadC n=4 Tax=Pseudomonas RepI... 156 2e-37 UniRef50_C4XRP2 DNA repair protein RadC n=4 Tax=Desulfovibrional... 156 2e-37 UniRef50_B2V090 UPF0758 protein CLH_0547 n=18 Tax=Clostridium Re... 156 2e-37 UniRef50_D1U9S4 DNA repair protein RadC n=1 Tax=Desulfovibrio ae... 156 2e-37 UniRef50_C6E4Z0 DNA repair protein RadC n=3 Tax=Geobacter RepID=... 156 2e-37 UniRef50_A1SR15 UPF0758 protein Ping_0056 n=2 Tax=Gammaproteobac... 156 3e-37 UniRef50_C4Z083 DNA repair protein RadC n=1 Tax=Eubacterium elig... 156 3e-37 UniRef50_C0GE80 DNA repair protein RadC n=1 Tax=Dethiobacter alk... 156 3e-37 UniRef50_A9KL05 DNA repair protein RadC n=7 Tax=Clostridiales Re... 155 3e-37 UniRef50_Q3AF80 UPF0758 protein CHY_0341 n=1 Tax=Carboxydothermu... 155 3e-37 UniRef50_B0RXB0 DNA repair protein radC homolog n=3 Tax=Xanthomo... 155 4e-37 UniRef50_B1C9I2 Putative uncharacterized protein n=1 Tax=Anaerof... 155 4e-37 UniRef50_B5YL92 DNA repair protein RadC n=1 Tax=Thermodesulfovib... 154 6e-37 UniRef50_Q5DY97 DNA repair protein RadC n=17 Tax=Proteobacteria ... 154 7e-37 UniRef50_C6BYC2 DNA repair protein RadC n=1 Tax=Desulfovibrio sa... 154 7e-37 UniRef50_Q2S042 UPF0758 protein SRU_2338 n=1 Tax=Salinibacter ru... 154 7e-37 UniRef50_UPI0001BC32AB DNA repair protein RadC n=1 Tax=Butyrivib... 154 8e-37 UniRef50_Q1WT78 DNA repair protein n=3 Tax=Lactobacillus RepID=Q... 154 9e-37 UniRef50_Q02HM7 Putative uncharacterized protein n=1 Tax=Pseudom... 154 9e-37 UniRef50_A9I305 DNA repair protein radC homolog n=3 Tax=Proteoba... 154 9e-37 UniRef50_A9IU27 UPF0758 protein Bpet3149 n=5 Tax=Bordetella RepI... 154 1e-36 UniRef50_A1K759 DNA repair protein n=2 Tax=Rhodocyclaceae RepID=... 153 2e-36 UniRef50_C7GE95 DNA repair protein RadC n=2 Tax=Roseburia RepID=... 153 2e-36 UniRef50_Q042N7 DNA repair protein n=7 Tax=Lactobacillus RepID=Q... 153 2e-36 UniRef50_Q0AWG3 UPF0758 protein Swol_1642 n=12 Tax=Firmicutes Re... 153 2e-36 UniRef50_Q8VR59 Putative intergenic-region protein n=24 Tax=Esch... 153 2e-36 UniRef50_B7ANR2 Putative uncharacterized protein n=1 Tax=Bactero... 152 2e-36 UniRef50_A9HJN5 DNA repair protein RadC n=1 Tax=Gluconacetobacte... 152 3e-36 UniRef50_Q38XC8 UPF0758 protein LCA_0852 n=1 Tax=Lactobacillus s... 152 3e-36 UniRef50_C2KVW9 Possible DNA repair protein RadC n=1 Tax=Oribact... 152 3e-36 UniRef50_B7C9V0 Putative uncharacterized protein n=1 Tax=Eubacte... 152 3e-36 UniRef50_Q2B8H5 Putative uncharacterized protein n=1 Tax=Bacillu... 152 3e-36 UniRef50_Q1DAY3 DNA repair protein RadC n=1 Tax=Myxococcus xanth... 152 3e-36 UniRef50_D2BJ47 DNA repair protein n=5 Tax=Dehalococcoides RepID... 152 4e-36 UniRef50_UPI0000E0FF1E DNA repair protein RadC n=1 Tax=Rhodobact... 152 4e-36 UniRef50_C9LLN8 DNA repair protein RadC n=1 Tax=Dialister invisu... 151 5e-36 UniRef50_B2A699 DNA repair protein RadC n=1 Tax=Natranaerobius t... 151 6e-36 UniRef50_A9IEU5 Putative DNA repair protein n=1 Tax=Bordetella p... 151 6e-36 UniRef50_C8PDJ9 DNA repair protein RadC n=1 Tax=Lactobacillus in... 151 6e-36 UniRef50_A0Z2T6 DNA repair protein RadC n=1 Tax=marine gamma pro... 151 7e-36 UniRef50_Q6TFX1 ORF25 n=3 Tax=Enterobacteriaceae RepID=Q6TFX1_ERWAM 151 7e-36 UniRef50_A7HJG0 DNA repair protein RadC n=3 Tax=Thermotogaceae R... 151 7e-36 UniRef50_A6Q5Q5 DNA repair protein RadC n=2 Tax=unclassified Eps... 151 8e-36 UniRef50_D2RM81 DNA repair protein RadC n=2 Tax=Acidaminococcus ... 151 9e-36 UniRef50_B4CZF8 DNA repair protein RadC n=2 Tax=Verrucomicrobia ... 151 9e-36 UniRef50_Q3A6E7 DNA repair protein, RadC-like n=3 Tax=Desulfurom... 151 1e-35 UniRef50_D1AWS8 DNA repair protein RadC n=1 Tax=Streptobacillus ... 151 1e-35 UniRef50_Q5FNC4 DNA repair protein RadC n=1 Tax=Gluconobacter ox... 150 1e-35 UniRef50_Q4QPE3 Putative DNA repair radC-like protein n=5 Tax=Ha... 150 1e-35 UniRef50_C2BCF6 DNA repair protein RadC n=2 Tax=Anaerococcus Rep... 150 1e-35 UniRef50_A5URD0 UPF0758 protein RoseRS_0767 n=7 Tax=Bacteria Rep... 150 1e-35 UniRef50_D2MNQ5 Putative DNA repair protein RadC n=1 Tax=Bulleid... 150 2e-35 UniRef50_Q31EB6 UPF0758 protein Tcr_1917 n=5 Tax=Gammaproteobact... 150 2e-35 UniRef50_C3WF45 Putative uncharacterized protein n=1 Tax=Fusobac... 149 2e-35 UniRef50_A5FRP1 DNA repair protein RadC n=6 Tax=cellular organis... 149 2e-35 UniRef50_C0BM81 DNA repair protein RadC n=2 Tax=Bacteroidetes Re... 149 2e-35 UniRef50_UPI000185C66E DNA repair protein RadC n=1 Tax=Capnocyto... 149 3e-35 UniRef50_C7NDB9 DNA repair protein RadC n=4 Tax=Fusobacteriaceae... 149 3e-35 UniRef50_C7M9C6 DNA repair protein RadC n=1 Tax=Capnocytophaga o... 149 3e-35 UniRef50_UPI0001C34E02 DNA repair protein RadC n=1 Tax=Clostridi... 149 3e-35 UniRef50_D1VVJ8 DNA repair protein RadC-like protein n=1 Tax=Pep... 149 4e-35 UniRef50_B5V5B9 RadC n=5 Tax=Firmicutes RepID=B5V5B9_BACCE 149 4e-35 UniRef50_C0Q9Z9 RadC3 n=1 Tax=Desulfobacterium autotrophicum HRM... 148 4e-35 UniRef50_C6XNR3 DNA repair protein RadC n=1 Tax=Hirschia baltica... 148 4e-35 UniRef50_C0GMV6 DNA repair protein RadC n=1 Tax=Desulfonatronosp... 148 4e-35 UniRef50_C0R2T1 DNA repair protein RadC n=7 Tax=Wolbachia RepID=... 148 6e-35 UniRef50_A5FMW5 UPF0758 protein Fjoh_0413 n=33 Tax=Bacteroidetes... 148 6e-35 UniRef50_A8YUM9 DNA repair protein RadC n=9 Tax=Lactobacillus Re... 147 7e-35 UniRef50_A7V531 Putative uncharacterized protein n=1 Tax=Bactero... 147 7e-35 UniRef50_Q6F7Z8 UPF0758 protein ACIAD3126 n=19 Tax=Proteobacteri... 147 8e-35 UniRef50_C7JGI7 DNA repair protein RadC n=8 Tax=Acetobacter past... 147 1e-34 UniRef50_Q7UL21 DNA repair protein n=4 Tax=Bacteria RepID=Q7UL21... 147 1e-34 UniRef50_Q2GL92 DNA repair protein RadC n=12 Tax=Rickettsiales R... 147 1e-34 UniRef50_B9MPC4 DNA repair protein RadC n=2 Tax=Clostridia RepID... 147 1e-34 UniRef50_B3JIE2 Putative uncharacterized protein n=10 Tax=Bacter... 147 1e-34 UniRef50_B2V8J4 DNA repair protein RadC n=5 Tax=Aquificales RepI... 147 1e-34 UniRef50_B0S3Y4 UPF0758 protein FMG_0357 n=2 Tax=Finegoldia magn... 147 2e-34 UniRef50_C0BG63 DNA repair protein RadC n=1 Tax=Flavobacteria ba... 146 2e-34 UniRef50_B2URH1 DNA repair protein RadC n=1 Tax=Akkermansia muci... 146 2e-34 UniRef50_Q64AS5 DNA repair proteins n=1 Tax=uncultured archaeon ... 146 2e-34 UniRef50_D1QST5 DNA repair protein RadC n=13 Tax=Bacteroidales R... 146 3e-34 UniRef50_C4FYP9 Putative uncharacterized protein n=1 Tax=Abiotro... 146 3e-34 UniRef50_Q9LAI3 RadC (Fragment) n=2 Tax=Firmicutes RepID=Q9LAI3_... 146 3e-34 UniRef50_Q03R16 DNA repair protein n=1 Tax=Lactobacillus brevis ... 145 3e-34 UniRef50_C7GYN9 DNA repair protein RadC n=1 Tax=Eubacterium saph... 145 4e-34 UniRef50_Q5WTW4 UPF0758 protein lpl2409 n=6 Tax=Legionella RepID... 145 4e-34 UniRef50_B0MF12 Putative uncharacterized protein n=3 Tax=Clostri... 145 4e-34 UniRef50_Q1RK76 DNA repair protein RadC n=11 Tax=Rickettsia RepI... 145 4e-34 UniRef50_C7PSZ0 DNA repair protein RadC n=1 Tax=Chitinophaga pin... 145 5e-34 UniRef50_C6VI64 DNA repair protein n=3 Tax=Lactobacillus plantar... 145 5e-34 UniRef50_C4V569 DNA repair protein RadC n=2 Tax=Selenomonas RepI... 145 5e-34 UniRef50_B5CP31 Putative uncharacterized protein n=2 Tax=Clostri... 144 7e-34 UniRef50_Q0FHF8 DNA repair protein RadC n=1 Tax=Roseovarius sp. ... 144 7e-34 UniRef50_UPI0001BC61BD DNA repair protein radC n=3 Tax=Fusobacte... 144 8e-34 UniRef50_B9XSW5 DNA repair protein RadC n=1 Tax=bacterium Ellin5... 144 8e-34 UniRef50_A3ER13 DNA repair protein (RadC) n=3 Tax=Leptospirillum... 144 9e-34 UniRef50_D2EK65 DNA repair protein n=1 Tax=Pediococcus acidilact... 144 9e-34 UniRef50_A1BHA1 UPF0758 protein Cpha266_1761 n=11 Tax=Chlorobiac... 144 1e-33 UniRef50_C5TNC6 DNA repair protein RadC n=3 Tax=Neisseria RepID=... 143 1e-33 UniRef50_Q8DI83 UPF0758 protein tlr1707 n=31 Tax=Cyanobacteria R... 143 1e-33 UniRef50_Q4V1K6 Possible DNA repair protein n=7 Tax=Bacillus cer... 143 2e-33 UniRef50_B2KEG6 DNA repair protein RadC n=1 Tax=Elusimicrobium m... 143 2e-33 UniRef50_A5VEU8 DNA repair protein RadC n=4 Tax=Sphingomonadales... 143 2e-33 UniRef50_UPI000196B4AA hypothetical protein CATMIT_00107 n=1 Tax... 142 2e-33 UniRef50_A6DS55 DNA repair protein RadC n=1 Tax=Lentisphaera ara... 142 2e-33 UniRef50_Q93MC6 DNA repair protein RadC n=1 Tax=Clostridium perf... 142 3e-33 UniRef50_C4ZA49 DNA repair protein RadC n=1 Tax=Eubacterium rect... 142 3e-33 UniRef50_B9QT39 DNA repair protein RadC n=1 Tax=Labrenzia alexan... 142 3e-33 UniRef50_Q3JV52 UPF0758 protein BURPS1710b_1139 n=75 Tax=Proteob... 142 3e-33 UniRef50_A8RIH3 Putative uncharacterized protein n=2 Tax=Clostri... 142 3e-33 UniRef50_C9LCX8 DNA repair protein RadC n=1 Tax=Prevotella tanne... 142 4e-33 UniRef50_O67541 UPF0758 protein aq_1610 n=2 Tax=Aquificaceae Rep... 142 4e-33 UniRef50_D1W0Q6 Putative DNA repair protein RadC n=2 Tax=Prevote... 141 5e-33 UniRef50_C0QCU0 RadC2 n=2 Tax=Desulfobacterium autotrophicum HRM... 141 6e-33 UniRef50_Q6AQC9 Related to DNA repair protein RadC n=4 Tax=Delta... 141 6e-33 UniRef50_C3WLA1 DNA repair protein radC n=2 Tax=Fusobacterium Re... 141 7e-33 UniRef50_A0L491 DNA repair protein RadC n=4 Tax=Bacteria RepID=A... 141 7e-33 UniRef50_Q2GEH3 DNA repair protein RadC n=2 Tax=Neorickettsia Re... 141 7e-33 UniRef50_A8ZUS2 DNA repair protein RadC n=1 Tax=Desulfococcus ol... 141 7e-33 UniRef50_Q8RF15 UPF0758 protein FN0909 n=11 Tax=Fusobacterium Re... 141 7e-33 UniRef50_B4RM65 UPF0758 protein NGK_1225 n=25 Tax=Neisseriaceae ... 141 8e-33 UniRef50_Q4EGF4 DNA repair protein RadC n=7 Tax=Bacilli RepID=Q4... 141 1e-32 UniRef50_B8KU95 DNA repair protein RadC n=1 Tax=gamma proteobact... 140 1e-32 UniRef50_B0MUL4 Putative uncharacterized protein n=1 Tax=Alistip... 140 1e-32 UniRef50_B8FHA4 DNA repair protein RadC n=1 Tax=Desulfatibacillu... 140 1e-32 UniRef50_C0GR82 DNA repair protein RadC n=2 Tax=Desulfonatronosp... 140 1e-32 UniRef50_C1A4H3 DNA repair protein RadC n=1 Tax=Gemmatimonas aur... 140 2e-32 UniRef50_Q0GNI5 Smu18B n=1 Tax=uncultured organism RepID=Q0GNI5_... 140 2e-32 UniRef50_Q4FQM6 UPF0758 protein Psyc_1834 n=3 Tax=Moraxellaceae ... 140 2e-32 UniRef50_Q7MVX9 UPF0758 protein PG_0894 n=24 Tax=Bacteroidales R... 140 2e-32 UniRef50_A6GHT1 DNA repair protein RadC n=1 Tax=Plesiocystis pac... 140 2e-32 UniRef50_A1BGW3 DNA repair protein RadC n=2 Tax=Chlorobium RepID... 140 2e-32 UniRef50_C5NXB5 DNA repair protein RadC homolog n=1 Tax=Gemella ... 139 2e-32 UniRef50_C7TC16 DNA repair protein n=8 Tax=Lactobacillus RepID=C... 139 2e-32 UniRef50_UPI00016C0069 DNA repair protein RadC n=1 Tax=Epulopisc... 139 3e-32 UniRef50_B6AT60 DNA repair protein RadC n=1 Tax=Rhodobacterales ... 139 3e-32 UniRef50_A4XMN4 DNA repair protein RadC n=2 Tax=Caldicellulosiru... 139 3e-32 UniRef50_C1SJ65 DNA repair protein radc n=1 Tax=Denitrovibrio ac... 139 3e-32 UniRef50_Q2QJL1 DNA repair protein RadC n=1 Tax=Acetobacter acet... 139 3e-32 UniRef50_Q03EP2 DNA repair protein n=1 Tax=Pediococcus pentosace... 139 4e-32 UniRef50_A2RLC4 UPF0758 protein llmg_1515 n=4 Tax=Lactococcus la... 138 6e-32 UniRef50_Q6MAB0 UPF0758 protein pc1765 n=1 Tax=Candidatus Protoc... 138 7e-32 UniRef50_A8ZYJ4 DNA repair protein RadC n=1 Tax=Desulfococcus ol... 137 7e-32 UniRef50_A4W1K3 UPF0758 protein SSU98_1084 n=76 Tax=Streptococcu... 137 7e-32 UniRef50_C8N8A0 DNA repair protein RadC n=1 Tax=Cardiobacterium ... 137 9e-32 UniRef50_C3DWR5 DNA repair protein RadC n=1 Tax=Bacillus thuring... 137 9e-32 UniRef50_D1R5B1 Putative uncharacterized protein n=1 Tax=Parachl... 137 1e-31 UniRef50_Q47CZ3 DNA repair protein RadC n=2 Tax=Dechloromonas ar... 137 1e-31 UniRef50_C8NZ93 DNA repair protein RadC n=1 Tax=Erysipelothrix r... 137 1e-31 UniRef50_B5Y6A0 UPF0758 protein COPRO5265_1522 n=1 Tax=Coprother... 137 2e-31 UniRef50_B0G8S0 Putative uncharacterized protein n=5 Tax=Firmicu... 136 2e-31 UniRef50_A9B8G6 DNA repair protein RadC n=1 Tax=Herpetosiphon au... 136 2e-31 UniRef50_D1N9M0 DNA repair protein RadC n=1 Tax=Victivallis vade... 136 2e-31 UniRef50_A8ZTW3 DNA repair protein RadC n=5 Tax=Bacteria RepID=A... 136 2e-31 UniRef50_C7VI58 DNA repair protein RadC n=3 Tax=Bacilli RepID=C7... 136 2e-31 UniRef50_Q1MS20 DNA repair proteins n=3 Tax=Desulfovibrionaceae ... 136 2e-31 UniRef50_A9BIK5 DNA repair protein RadC n=1 Tax=Petrotoga mobili... 136 2e-31 UniRef50_B1H050 DNA repair protein RadC n=1 Tax=uncultured Termi... 136 2e-31 UniRef50_B5YDI9 DNA repair protein n=2 Tax=Dictyoglomus RepID=B5... 136 3e-31 UniRef50_A6L552 DNA repair protein n=5 Tax=Bacteroidales RepID=A... 136 3e-31 UniRef50_B4RG10 DNA repair protein RadC n=1 Tax=Phenylobacterium... 135 4e-31 UniRef50_C1QC41 DNA repair protein n=2 Tax=Brachyspira RepID=C1Q... 135 4e-31 UniRef50_B9L1S0 DNA repair protein radC homolog n=4 Tax=Bacteria... 135 5e-31 UniRef50_UPI0001BC305A putative DNA primase n=1 Tax=Butyrivibrio... 134 9e-31 UniRef50_Q2FT43 UPF0758 protein Mhun_2739 n=5 Tax=Archaea RepID=... 134 1e-30 Sequences not found previously or not previously below threshold: >UniRef50_B1IPT7 DNA repair protein RadC n=3 Tax=Enterobacteriaceae RepID=B1IPT7_ECOLC Length = 159 Score = 193 bits (491), Expect = 2e-48, Method: Composition-based stats. Identities = 94/157 (59%), Positives = 121/157 (77%) Query: 2 KQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRV 61 +QL E+ P D++ +++AL L+ L E G +FTS+HAVR+WLRL +A+LEREEF Sbjct: 3 QQLPLFARELAPADQQTVRKALSLLECQLRETGASFTSSHAVRDWLRLQLASLEREEFTA 62 Query: 62 LYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADK 121 L+LDNQ++LIAHETLFTGTIN T+VHPREVVK L N AAVI+AH+HPSGE PS+AD+ Sbjct: 63 LFLDNQHRLIAHETLFTGTINHTQVHPREVVKAGLKHNCAAVIVAHSHPSGEAEPSKADR 122 Query: 122 TLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +T R+ Q L LVDIR+ DHL+VGG +I SFA+ G L Sbjct: 123 QVTTRIQQALDLVDIRLLDHLVVGGMEITSFADRGWL 159 >UniRef50_P52140 UPF0758 protein yfjY n=148 Tax=Enterobacteriaceae RepID=YFJY_ECOLI Length = 160 Score = 193 bits (490), Expect = 2e-48, Method: Composition-based stats. Identities = 117/145 (80%), Positives = 129/145 (88%) Query: 14 QDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAH 73 +R ++RAL LDRHL E GVAFTST A R+WL+L MA LEREEF +LYL+ QNQLIAH Sbjct: 16 TAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAH 75 Query: 74 ETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQL 133 ETLF G+I+ TEVHPREVVKRAL+FNAAAVILAHNHPSG+TTPSQADKT+TQRLVQ LQL Sbjct: 76 ETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQL 135 Query: 134 VDIRVPDHLIVGGRQIYSFAEHGLL 158 VDIRVPDHLIVGGRQIYSFAEHGLL Sbjct: 136 VDIRVPDHLIVGGRQIYSFAEHGLL 160 >UniRef50_C8U0Q3 Predicted DNA repair protein n=21 Tax=Enterobacteriaceae RepID=C8U0Q3_ECO10 Length = 180 Score = 189 bits (482), Expect = 2e-47, Method: Composition-based stats. Identities = 87/148 (58%), Positives = 113/148 (76%) Query: 11 MTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQL 70 +TP +R I+RA+ LD++L +PG+AFTS+ A R+WLRLH+A ERE F VLYLDNQ++L Sbjct: 33 LTPYAQRTIRRAMNLLDKYLRQPGIAFTSSTAARDWLRLHLARQEREVFMVLYLDNQHRL 92 Query: 71 IAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQV 130 + ETLF G++N +VH REVVK AL FNAAAV+LAHNHPSG+ PSQ D+ +T RL + Sbjct: 93 LESETLFAGSVNHVQVHSREVVKSALRFNAAAVVLAHNHPSGDPEPSQCDRNITGRLKEA 152 Query: 131 LQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 L+LVD++ DHL+VG I SFAE G L Sbjct: 153 LELVDVKTLDHLVVGRDGIVSFAERGWL 180 >UniRef50_B3HA66 DNA repair protein RadC n=3 Tax=Enterobacteriaceae RepID=B3HA66_ECOLX Length = 157 Score = 183 bits (466), Expect = 1e-45, Method: Composition-based stats. Identities = 87/158 (55%), Positives = 114/158 (72%), Gaps = 1/158 (0%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 M +L P + ++R+I+RA+R L+++ PG +F S+ A + WL+LH+A ERE F Sbjct: 1 MSELMLTP-VFSVSEQRVIRRAMRLLEKYQRNPGESFLSSDATKTWLQLHLARQEREMFV 59 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 VLYLDNQN+L+ HETLF GTIN TEVHPRE+VK AL NAAAVILAHNHPSG PS+AD Sbjct: 60 VLYLDNQNRLLEHETLFLGTINSTEVHPREIVKSALRHNAAAVILAHNHPSGVAEPSRAD 119 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 + +T +V+ L LV++RV DH I+G + SFAE G L Sbjct: 120 RLITTNIVKTLDLVNVRVLDHFIIGAGDVLSFAERGWL 157 >UniRef50_A6SWN0 DNA repair protein RadC n=14 Tax=Proteobacteria RepID=A6SWN0_JANMA Length = 190 Score = 182 bits (462), Expect = 3e-45, Method: Composition-based stats. Identities = 73/158 (46%), Positives = 110/158 (69%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 ++ S ++T D ++ RA+ LD H+ + G TS V+++LRL + +RE F Sbjct: 32 LRHWSEFLHDLTAVDTWIVHRAIEILDEHVIKHGPKLTSPKDVKDYLRLQLLNEKREVFA 91 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 V+++D Q++++A+E LF GTI++T V+PR +V+RA+ NAA++ILAHNHPSG T PS+AD Sbjct: 92 VVFMDTQHRVLAYEPLFFGTIHQTSVYPRAIVQRAMSLNAASMILAHNHPSGSTHPSEAD 151 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 K LT RL +L+ +D+RV DH I+G +SFAEHGLL Sbjct: 152 KQLTNRLKSLLESIDVRVLDHFIIGEEGTFSFAEHGLL 189 >UniRef50_B0T9F0 DNA repair protein RadC n=1 Tax=Caulobacter sp. K31 RepID=B0T9F0_CAUSK Length = 223 Score = 181 bits (459), Expect = 8e-45, Method: Composition-based stats. Identities = 66/157 (42%), Positives = 98/157 (62%) Query: 2 KQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRV 61 QL GE+ D +L++ A R + R TS V ++LR MA L REEF V Sbjct: 67 SQLHLAVGELAAMDLKLLREAARRVTRADLAQRQLLTSFSQVADYLRALMAGLPREEFWV 126 Query: 62 LYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADK 121 L+LD +NQL++ E L G+++ V+PREV++RAL N +A+ILAHNHPSG+ PSQ D Sbjct: 127 LFLDRRNQLLSAERLGVGSVDHAPVYPREVMRRALELNCSAMILAHNHPSGDPQPSQPDI 186 Query: 122 TLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +T+ L++ + + I++ DH+IV G + SF +GL+ Sbjct: 187 EMTKTLIEAGKALQIQIHDHMIVAGGAVVSFRANGLI 223 >UniRef50_A9AE97 DNA repair protein n=8 Tax=Bacteria RepID=A9AE97_BURM1 Length = 169 Score = 181 bits (459), Expect = 8e-45, Method: Composition-based stats. Identities = 72/150 (48%), Positives = 93/150 (62%) Query: 9 GEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQN 68 G I A R + + G FTS AV+++LR +A E E F VL+LD ++ Sbjct: 20 GRYRQASADQILEAARQVIDQKMQRGDEFTSPAAVKDYLRAKLAGFEHEVFAVLFLDTRH 79 Query: 69 QLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLV 128 +LI + +F GTI+ EVHPREVVK AL NAAAVI++HNHPSG PS AD+ +T +L Sbjct: 80 RLIDYAEMFRGTIDSAEVHPREVVKEALRLNAAAVIISHNHPSGNPEPSAADRAMTSQLR 139 Query: 129 QVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 Q L LVD+R DH+IV G SFAE GL+ Sbjct: 140 QALALVDVRTLDHIIVAGGTTTSFAERGLI 169 >UniRef50_C6DAT0 DNA repair protein RadC n=5 Tax=Enterobacteriaceae RepID=C6DAT0_PECCP Length = 157 Score = 179 bits (455), Expect = 2e-44, Method: Composition-based stats. Identities = 75/152 (49%), Positives = 103/152 (67%) Query: 7 LPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDN 66 L G + +++R+IQ AL L++ + + F ++ + WL L ++ LERE F VLYLDN Sbjct: 6 LAGRVASREQRIIQMALCLLEKRVRKNARQFKTSEDTKSWLMLELSNLEREVFMVLYLDN 65 Query: 67 QNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQR 126 Q++LI E + G IN TEVHPRE++K +L NAAAVILAHNHPSG PSQAD+ +T R Sbjct: 66 QHRLIEKEVIALGGINSTEVHPREILKASLRHNAAAVILAHNHPSGWAEPSQADRNITDR 125 Query: 127 LVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 L L +D++V DHL+VG ++ SFAE G L Sbjct: 126 LKDSLSQLDVKVLDHLVVGSTEVVSFAERGWL 157 >UniRef50_C5V0A3 DNA repair protein RadC n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V0A3_9PROT Length = 205 Score = 177 bits (449), Expect = 1e-43, Method: Composition-based stats. Identities = 73/157 (46%), Positives = 100/157 (63%), Gaps = 3/157 (1%) Query: 2 KQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRV 61 KQ + P + + L+ +RAL + + + + V+++L+L + ++E F V Sbjct: 52 KQPHYAPAAIISAAKELV---MRALSEDITQNPINLNNPVEVKKYLKLLLGGRQQEVFVV 108 Query: 62 LYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADK 121 L+LD Q++LIA E LF GT+ +T V+PREVVKRAL NAAAV+LAHNHPSG PSQAD+ Sbjct: 109 LFLDTQHRLIAAEELFHGTLTQTSVYPREVVKRALMHNAAAVLLAHNHPSGLAEPSQADQ 168 Query: 122 TLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 LT L Q L LVD+R DH I+G SFAE GL+ Sbjct: 169 LLTNALKQALALVDVRALDHFIIGDESALSFAERGLI 205 >UniRef50_B2FJW1 UPF0758 protein Smlt0399 n=129 Tax=Proteobacteria RepID=Y399_STRMK Length = 234 Score = 175 bits (445), Expect = 3e-43, Method: Composition-based stats. Identities = 75/160 (46%), Positives = 98/160 (61%), Gaps = 5/160 (3%) Query: 3 QLSFLPGEMTPQDRRLIQRALRALDRHLH---EPGVAF-TSTHAVREWLRLHMAALEREE 58 +L+ LPG + P + L R+L E G A + AV +L+ + RE Sbjct: 67 ELARLPG-LGPARSCTLAAGLELAHRYLAAELEHGEAVGNNPAAVGRYLQHRLRGQAREV 125 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 F L+LDN+++LIA E LF GTIN V+PREVV+RAL NAAAVIL+HNHPSG+ PS Sbjct: 126 FMALFLDNRHRLIACEELFHGTINAAPVYPREVVRRALLHNAAAVILSHNHPSGDPEPSS 185 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 AD +T L Q L +VD+R+ DH +VG + SFAE GLL Sbjct: 186 ADTRITDELQQALAMVDVRLLDHFVVGEGRPVSFAERGLL 225 >UniRef50_B0UUW7 UPF0758 protein HSM_0009 n=10 Tax=Pasteurellaceae RepID=Y009_HAES2 Length = 222 Score = 174 bits (441), Expect = 1e-42, Method: Composition-based stats. Identities = 66/143 (46%), Positives = 94/143 (65%), Gaps = 3/143 (2%) Query: 19 IQRALRALDRHLHEP---GVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHET 75 +Q R+L + FTS VR +L+ + +RE F VL+LDNQ++LI E Sbjct: 80 LQACTEMTKRYLLQELQFAQEFTSPDTVRMYLQTELENKDREIFMVLFLDNQHRLIKKEE 139 Query: 76 LFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVD 135 +F GTIN+ V+PRE++K AL NAAA+ILAHNHPSG +TPS AD+ +T+ + Q+ +L++ Sbjct: 140 MFLGTINQANVYPREIIKTALFCNAAALILAHNHPSGVSTPSMADRKMTENIKQLSELME 199 Query: 136 IRVPDHLIVGGRQIYSFAEHGLL 158 IRV DH I+G +SFAE G + Sbjct: 200 IRVLDHFIIGKGNYFSFAEQGWI 222 >UniRef50_C5SDF8 DNA repair protein RadC n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SDF8_CHRVI Length = 167 Score = 173 bits (440), Expect = 1e-42, Method: Composition-based stats. Identities = 69/145 (47%), Positives = 96/145 (66%) Query: 14 QDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAH 73 +R L+ A+ L+RH A TS A R++L+L + L E F VL LDN+++++ + Sbjct: 23 TERTLVAEAIDCLERHYRVAQEALTSPDATRDYLKLRLYGLTYEVFAVLLLDNRHRVLRY 82 Query: 74 ETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQL 133 + LF GTI+ VHPREVV+ + AAAVI AHNHPSG + PSQAD+TLT++L L L Sbjct: 83 QELFRGTIDTAYVHPREVVRLVIESGAAAVIFAHNHPSGSSDPSQADRTLTRKLQDALAL 142 Query: 134 VDIRVPDHLIVGGRQIYSFAEHGLL 158 +++RV DH+IVG + SFAE G L Sbjct: 143 IEVRVLDHIIVGEGRGMSFAEQGWL 167 >UniRef50_B8KQ45 DNA repair protein RadC n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KQ45_9GAMM Length = 177 Score = 172 bits (437), Expect = 3e-42, Method: Composition-based stats. Identities = 68/154 (44%), Positives = 93/154 (60%), Gaps = 1/154 (0%) Query: 5 SFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYL 64 F P TP +R+I++AL L+ L A TS VR++ +L + E F L+L Sbjct: 25 PFQPDAWTPAQQRIIEKALALLESRLIN-SDALTSPVRVRQYCQLQLGHERDEHFACLFL 83 Query: 65 DNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLT 124 Q+ I+ E F G+I+ V+PR +V+R L NAAAVIL HNHPSG + PS AD+ +T Sbjct: 84 TAQHHAISFEIQFRGSIDGAAVYPRVIVRRCLELNAAAVILVHNHPSGVSEPSPADRQIT 143 Query: 125 QRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 RL + L+L+D+RV DHLIV SFA+ GLL Sbjct: 144 VRLQRALELIDVRVVDHLIVSAGDATSFAQAGLL 177 >UniRef50_A1TJG0 DNA repair protein RadC n=1 Tax=Acidovorax citrulli AAC00-1 RepID=A1TJG0_ACIAC Length = 167 Score = 172 bits (436), Expect = 4e-42, Method: Composition-based stats. Identities = 71/149 (47%), Positives = 99/149 (66%) Query: 10 EMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQ 69 +T Q+ RL+ RAL L++ + A ++ + ++LRL +A E F V++LD QN+ Sbjct: 19 ALTVQESRLVHRALHVLEQRMFHREAAISTPRELYDYLRLKLAGELHEVFGVVFLDCQNR 78 Query: 70 LIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQ 129 IA E LF GTIN+ V+PR +VKRA+ NA++VIL HNHPSG + S AD+ LT+R+ Sbjct: 79 AIAFEALFRGTINQAVVYPRVIVKRAMDLNASSVILVHNHPSGTSQCSDADRGLTERICA 138 Query: 130 VLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 L L+D+RV DH+IVG YSFAE GLL Sbjct: 139 SLGLIDVRVVDHVIVGSGTPYSFAEAGLL 167 >UniRef50_A1B4F1 UPF0758 protein Pden_2304 n=44 Tax=Alphaproteobacteria RepID=Y2304_PARDP Length = 263 Score = 172 bits (436), Expect = 4e-42, Method: Composition-based stats. Identities = 64/150 (42%), Positives = 92/150 (61%) Query: 9 GEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQN 68 G Q+ ++++ A + L R TS A+ ++ MA E E+FRVLYLD +N Sbjct: 114 GPAVLQELKIVEAAAQRLARSRVMHRPVLTSWDALLDYCHTAMAHGEIEQFRVLYLDRKN 173 Query: 69 QLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLV 128 LIA E GT++ V+PRE+++RAL +A+A+IL HNHPSG+ TPSQAD +T R+V Sbjct: 174 VLIADEEQARGTVDHVPVYPREIMRRALELSASALILVHNHPSGDPTPSQADIGMTNRIV 233 Query: 129 QVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +++ I V DHLI+G + SF GLL Sbjct: 234 AAAEVMGIAVHDHLIIGRSRELSFRSEGLL 263 >UniRef50_A7FEQ9 DNA repair protein, RadC family n=4 Tax=Yersinia RepID=A7FEQ9_YERP3 Length = 162 Score = 171 bits (434), Expect = 6e-42, Method: Composition-based stats. Identities = 77/157 (49%), Positives = 101/157 (64%), Gaps = 1/157 (0%) Query: 3 QLSFLPGEMTP-QDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRV 61 Q P +++I +AL L+ L TS AV+ WL+LH+ RE F V Sbjct: 4 QPMRASLPTLPFAQQQIISQALAILEIQLRHRPYTLTSPEAVKAWLQLHLRPQGRECFMV 63 Query: 62 LYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADK 121 L+LDN+++L+A ET+ GT N T V+PREVV RALH AAV++AHNHP+G+ TPSQAD+ Sbjct: 64 LFLDNRHRLMASETVSVGTFNATTVYPREVVIRALHHRCAAVVIAHNHPAGDPTPSQADR 123 Query: 122 TLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 TLT +LV L +VDIRV DHLI+G + S AE G L Sbjct: 124 TLTAQLVNALNMVDIRVLDHLIIGESEPVSLAELGWL 160 >UniRef50_Q0AJV4 DNA repair protein RadC n=18 Tax=Proteobacteria RepID=Q0AJV4_NITEC Length = 167 Score = 171 bits (434), Expect = 7e-42, Method: Composition-based stats. Identities = 67/145 (46%), Positives = 97/145 (66%) Query: 14 QDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAH 73 QD R+IQ+A+ L+ + + G AVR++LRL + A E F ++L++Q+Q++A Sbjct: 22 QDDRIIQQAIALLEHRVFKAGPTLDGPKAVRDYLRLKLMAEPNEVFVAVFLNSQHQVLAC 81 Query: 74 ETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQL 133 E LF GT++ V+PR VV+RAL NA+A+I +H HPSG PS AD+ +T RL +L + Sbjct: 82 ECLFKGTVSEASVYPRVVVQRALELNASALIFSHQHPSGVAEPSMADRAITNRLKFILSM 141 Query: 134 VDIRVPDHLIVGGRQIYSFAEHGLL 158 +DIRV DH I+G + YSFAE GLL Sbjct: 142 IDIRVVDHFIIGKGEPYSFAESGLL 166 >UniRef50_Q9KUK8 UPF0758 protein VC_0510 n=11 Tax=Gammaproteobacteria RepID=Y510_VIBCH Length = 157 Score = 170 bits (432), Expect = 1e-41, Method: Composition-based stats. Identities = 72/145 (49%), Positives = 95/145 (65%), Gaps = 2/145 (1%) Query: 14 QDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAH 73 Q+ +++ A L + G A T+ A +E++R + + ERE F +L LDNQN+LI Sbjct: 15 QENEILEHAAEILANR-YVRGDALTNPDATKEYVRCKLGSYEREVFALLLLDNQNRLIEF 73 Query: 74 ETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQL 133 + LF GT++ V+PREVVK L NAAAVI AHNHPSG++TPSQAD+ +T+RL L L Sbjct: 74 KELFQGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADRRITERLKDTLAL 133 Query: 134 VDIRVPDHLIVGGRQIYSFAEHGLL 158 VD+RV DH IV G SFAE G L Sbjct: 134 VDVRVLDH-IVTGDTCTSFAERGWL 157 >UniRef50_Q4UPP0 UPF0758 protein XC_3944 n=35 Tax=Proteobacteria RepID=Y3944_XANC8 Length = 225 Score = 170 bits (431), Expect = 1e-41, Method: Composition-based stats. Identities = 73/160 (45%), Positives = 100/160 (62%), Gaps = 4/160 (2%) Query: 2 KQLSFLPGEMTPQDRRLIQRALRALDRHLH---EPGVAFTSTHAVREWLRLHMAALEREE 58 K L+ LPG + P + AL +RHL E G A + +V + + A E Sbjct: 66 KALARLPG-LGPASACKLSAALELANRHLLSDLERGEALSDPSSVGRYFSQRLRARNYEV 124 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 F L+LD++++ IA E LFTGTI+ E+HPREVV+RAL NAAAV++ HNHPSG PS+ Sbjct: 125 FAALFLDSRHRAIAFEELFTGTIDAAEIHPREVVRRALLHNAAAVVVGHNHPSGNPEPSE 184 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 AD+ +TQRL+Q L LVDIR+ DH ++G + S AE G + Sbjct: 185 ADRAVTQRLLQALGLVDIRLLDHFVIGDGRPVSLAERGWV 224 >UniRef50_B5EXE3 UPF0758 protein yicR n=116 Tax=Enterobacteriaceae RepID=YICR_SALA4 Length = 221 Score = 169 bits (430), Expect = 2e-41, Method: Composition-based stats. Identities = 66/146 (45%), Positives = 96/146 (65%), Gaps = 1/146 (0%) Query: 13 PQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIA 72 Q + + + A R ++E A S RE+L+ + ERE F V++LD Q++++ Sbjct: 77 AQLKGIAELARRYYSVRMNEES-ALLSPEMTREFLQSQLTGEEREIFLVIFLDAQHRVLQ 135 Query: 73 HETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQ 132 H LF+GT+N EVHPRE+V+ A+ NA+AVILAHNHPSG PS+ADK +T+R+++ Q Sbjct: 136 HSRLFSGTLNHVEVHPREIVREAIKLNASAVILAHNHPSGCAEPSKADKLITERVIKCCQ 195 Query: 133 LVDIRVPDHLIVGGRQIYSFAEHGLL 158 +DIRV DHLI+G + SFAE G + Sbjct: 196 FMDIRVLDHLIIGRGEYVSFAERGWI 221 >UniRef50_Q0ACW7 DNA repair protein RadC n=2 Tax=Proteobacteria RepID=Q0ACW7_NITEC Length = 173 Score = 169 bits (430), Expect = 2e-41, Method: Composition-based stats. Identities = 66/152 (43%), Positives = 91/152 (59%) Query: 7 LPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDN 66 L G T +I A RA + A T ++ + + E E F +++L++ Sbjct: 22 LEGRYTVASDEMIFTATRAAIERKYPANTAMTKPEIAADYFKNKLNGFEHEVFSIIFLNS 81 Query: 67 QNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQR 126 Q +LIA+ +F GT+ V+PREVVK A+ +NAAAVILAH HPS ET PSQADK +T+R Sbjct: 82 QYRLIAYREMFQGTLTCASVYPREVVKAAISYNAAAVILAHCHPSKETEPSQADKAITKR 141 Query: 127 LVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 L + L L+D+ V DH+IVGG S AE GL+ Sbjct: 142 LKEALDLIDVCVLDHIIVGGNTTKSMAEMGLV 173 >UniRef50_Q04B84 DNA repair protein n=2 Tax=Lactobacillus delbrueckii subsp. bulgaricus RepID=Q04B84_LACDB Length = 204 Score = 169 bits (428), Expect = 3e-41, Method: Composition-based stats. Identities = 54/156 (34%), Positives = 84/156 (53%), Gaps = 1/156 (0%) Query: 4 LSFLPGEMTPQDRRL-IQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVL 62 L + G P D L I+ A+ L R + + + +L + ++E+F VL Sbjct: 49 LDYASGPDCPNDLSLTIEVAMDRLRRTDMRRSSDWAGSSKIGNYLANKLLGQKQEQFWVL 108 Query: 63 YLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKT 122 Y D Q L+ + LF GT++R+ VHPRE+ + A+ + A++I+AHNHPSG TPS D Sbjct: 109 YFDQQQNLLGEKMLFQGTLDRSWVHPREIFRWAVVYGCASIIVAHNHPSGALTPSDNDLE 168 Query: 123 LTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 LT+ L + +++ I DH I+GG + S E L Sbjct: 169 LTKGLKKASKIMKITFLDHFIIGGGEYLSLRERELF 204 >UniRef50_A7MQ95 UPF0758 protein ESA_04094 n=32 Tax=Bacteria RepID=Y4094_ENTS8 Length = 230 Score = 168 bits (427), Expect = 4e-41, Method: Composition-based stats. Identities = 68/145 (46%), Positives = 92/145 (63%) Query: 14 QDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAH 73 + I R R A S R++L +A ERE F V++LD+QN++I Sbjct: 86 AQLKAIGELARRYYRSRPCEETALLSPTITRDFLESQLAEQEREVFLVIFLDSQNRIIRQ 145 Query: 74 ETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQL 133 TLFTGT++ EVHPRE+V+ A+ NAA +ILAHNHPSG PS+ADK +T+R+V+ QL Sbjct: 146 NTLFTGTLSHVEVHPREIVREAVRLNAAGIILAHNHPSGRAEPSRADKMVTERIVKSCQL 205 Query: 134 VDIRVPDHLIVGGRQIYSFAEHGLL 158 VDIRV DHL++G + SFAE G + Sbjct: 206 VDIRVLDHLVIGRGEYVSFAERGWI 230 >UniRef50_Q9KR57 UPF0758 protein VC_1786 n=59 Tax=Proteobacteria RepID=Y1786_VIBCH Length = 158 Score = 168 bits (426), Expect = 5e-41, Method: Composition-based stats. Identities = 72/147 (48%), Positives = 95/147 (64%), Gaps = 2/147 (1%) Query: 12 TPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLI 71 + R+++ A L++ + G F T E+LR +A E E F VL+LDNQ++LI Sbjct: 14 RAYEHRVLEEAAEILEQR-YVRGETFARTENTTEYLRCKLAGYEHEIFAVLFLDNQHRLI 72 Query: 72 AHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVL 131 + LF GT++ V+PREV+K AL+ NAAAVI AHNHPSG+ PSQAD+ +TQRL L Sbjct: 73 EFKELFRGTVDAASVYPREVLKEALNVNAAAVIFAHNHPSGDPEPSQADRRITQRLKDAL 132 Query: 132 QLVDIRVPDHLIVGGRQIYSFAEHGLL 158 LVDIRV DH++VG SFAE G L Sbjct: 133 SLVDIRVLDHVVVGKSS-VSFAERGWL 158 >UniRef50_Q3A8G4 UPF0758 protein Pcar_0065 n=2 Tax=Bacteria RepID=Y065_PELCD Length = 227 Score = 167 bits (425), Expect = 7e-41, Method: Composition-based stats. Identities = 52/150 (34%), Positives = 83/150 (55%) Query: 9 GEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQN 68 G + + + R R+ PG +TS AV + +RE F L LD++N Sbjct: 78 GPAKAAELQAVFELARRFGRNPLRPGDRYTSPQAVFAHFHERLRDHKRERFIALLLDSKN 137 Query: 69 QLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLV 128 +L+ + G++ + VHPR+V + +AAAV+ HNHPSG+ +PS+ D +TQRL Sbjct: 138 RLLREVGISEGSLTASIVHPRDVFAPVVRESAAAVLFVHNHPSGDPSPSREDLDITQRLR 197 Query: 129 QVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +V +L+ +RV DH+I+G S A+ G+L Sbjct: 198 EVGELMGVRVLDHIIIGDEGYVSLADRGVL 227 >UniRef50_A0R7V6 DNA repair protein RadC n=5 Tax=Desulfuromonadales RepID=A0R7V6_PELPD Length = 168 Score = 167 bits (425), Expect = 7e-41, Method: Composition-based stats. Identities = 56/154 (36%), Positives = 88/154 (57%), Gaps = 8/154 (5%) Query: 12 TPQDRRLIQRALRALDRHLHEPGVA-------FTSTHAVREWLRLHMAALEREEFRVLYL 64 TP +R++ +++ A R A FTS V E + + +E F L+L Sbjct: 16 TPATKRIVLKSIEARYRKEAVREDAPEWVTTRFTSPKQVFELFKDLI-YETKEHFITLHL 74 Query: 65 DNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLT 124 D +N+++ + + G++N++ VHPREV K AL NAAA+I H HPSG+ PS D ++T Sbjct: 75 DGKNRIMCMDRVSIGSLNQSIVHPREVFKTALLSNAAAIICVHQHPSGDPNPSSEDLSIT 134 Query: 125 QRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +RL + +++ IRV DH++VG SF E GL+ Sbjct: 135 KRLKEAGEIMGIRVLDHIVVGHEDYISFVEKGLM 168 >UniRef50_D2NHT0 Putative phage DNA repair protein n=1 Tax=Escherichia coli SE15 RepID=D2NHT0_ECOLX Length = 156 Score = 167 bits (425), Expect = 8e-41, Method: Composition-based stats. Identities = 70/148 (47%), Positives = 99/148 (66%), Gaps = 1/148 (0%) Query: 11 MTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQL 70 T ++ R++ +A + R+ ++ GV S VR + + +A LE EEF ++ LDNQNQL Sbjct: 10 FTQRETRILDQARDIISRY-YQRGVQLCSPDDVRRCVMVELAPLEHEEFGIILLDNQNQL 68 Query: 71 IAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQV 130 + E LF GT+N VHPREV+KR L NAAAVIL HNHPSGE PS+ D LT++L ++ Sbjct: 69 LHREILFRGTLNSVSVHPREVIKRVLKHNAAAVILVHNHPSGEPEPSRCDIQLTKKLQEL 128 Query: 131 LQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 L+++D+R+ DH IV G + S AE GL+ Sbjct: 129 LEILDVRLLDHFIVAGTETVSMAERGLV 156 >UniRef50_Q2J299 UPF0758 protein RPB_0700 n=15 Tax=Alphaproteobacteria RepID=Y700_RHOP2 Length = 250 Score = 167 bits (425), Expect = 8e-41, Method: Composition-based stats. Identities = 62/153 (40%), Positives = 95/153 (62%), Gaps = 1/153 (0%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 ++++S L GE + +L+ A + + + +S AV ++ R MA +RE+FR Sbjct: 94 LREVSGL-GEAAITEIKLVAAAAARVTKGQVKSRTVLSSWSAVIDYCRTTMAFADREQFR 152 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 +L+LD +NQLIA E GT++ T V+PRE+VKRAL +A AVI+ HNHPSG+ TPSQAD Sbjct: 153 ILFLDKRNQLIADELQQVGTVDHTPVYPREIVKRALELSATAVIMVHNHPSGDPTPSQAD 212 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFA 153 +T+ +V + + + + V DH+IVG S Sbjct: 213 IQMTKTIVAIAEPLGVAVHDHIIVGKNGHASLK 245 >UniRef50_A9VIS8 UPF0758 protein BcerKBAB4_4299 n=107 Tax=Firmicutes RepID=Y4299_BACWK Length = 225 Score = 167 bits (424), Expect = 9e-41, Method: Composition-based stats. Identities = 52/158 (32%), Positives = 89/158 (56%), Gaps = 2/158 (1%) Query: 1 MKQLSFLPGEMTPQDRRLIQ--RALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREE 58 ++++ + G + +L+ R + R ++ + S ++ M L++E Sbjct: 66 LEEMMSIHGVGIAKASQLMAAFELGRRMVRLEYQNRYSIRSPEDCASYMMEEMRFLQQEH 125 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 F LYL+ +NQ+I +T+F G++N + VHPREV K A AA++I HNHPSG+ PS+ Sbjct: 126 FVCLYLNTKNQVIHRQTIFIGSLNTSIVHPREVFKEAFRRAAASIICLHNHPSGDPAPSR 185 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHG 156 D +T+RLV+ +++ I V DH+I+G + S E G Sbjct: 186 EDIEVTKRLVECGRIIGIEVLDHIIIGDHKFVSLKEKG 223 >UniRef50_A4SUN7 DNA repair protein n=2 Tax=Aeromonas salmonicida subsp. salmonicida A449 RepID=A4SUN7_AERS4 Length = 296 Score = 167 bits (424), Expect = 1e-40, Method: Composition-based stats. Identities = 68/147 (46%), Positives = 89/147 (60%), Gaps = 1/147 (0%) Query: 11 MTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQL 70 T +++R+I A + R + S V E+L+ A LE E F ++ LDNQ+++ Sbjct: 17 FTEREKRIIALAHSIIARRFTR-LDSLNSPEMVVEYLKTRFATLEHETFAMILLDNQHRV 75 Query: 71 IAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQV 130 I L GTI+ V+PREVVK AL NAAAVILAHNHPSG PS+AD+ +T+RL Sbjct: 76 INAVDLSHGTIDSAAVYPREVVKTALKHNAAAVILAHNHPSGVAEPSRADRQITERLQAA 135 Query: 131 LQLVDIRVPDHLIVGGRQIYSFAEHGL 157 L LVDIRV DH++V G SFA G Sbjct: 136 LDLVDIRVLDHIVVAGENSMSFAVRGF 162 >UniRef50_C9Y8Q3 DNA repair protein radC homolog n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y8Q3_9BURK Length = 239 Score = 167 bits (423), Expect = 1e-40, Method: Composition-based stats. Identities = 79/158 (50%), Positives = 104/158 (65%), Gaps = 1/158 (0%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 +K + L + +++ A RA+ + L E V F AV+ +L+LH+AA E F Sbjct: 83 LKHVKGLGPAKRAEIVAVLELARRAMAQRLQEREV-FADPQAVKHYLQLHLAAKGHEVFA 141 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 VL+LD+QN+L+A E LF GT+ +T V+PREVV RALH AAAV+LAHNHPSG PS+AD Sbjct: 142 VLFLDSQNKLLAMEELFRGTLTQTSVYPREVVIRALHHGAAAVVLAHNHPSGSVQPSRAD 201 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 + LTQ L L LVD+RV DH+IVG Q S AE GL+ Sbjct: 202 EALTQTLKAALALVDVRVLDHIIVGPGQALSMAETGLI 239 >UniRef50_Q5E054 DNA repair protein RadC n=3 Tax=Gammaproteobacteria RepID=Q5E054_VIBF1 Length = 157 Score = 166 bits (422), Expect = 2e-40, Method: Composition-based stats. Identities = 71/145 (48%), Positives = 96/145 (66%), Gaps = 2/145 (1%) Query: 14 QDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAH 73 Q+ +++ A L + G AF++ A + +LR + ERE F VL LDNQ++LI Sbjct: 15 QENEILEHAAEILANR-YVRGDAFSNPTATQNYLRYKLGHYEREVFAVLLLDNQHRLIEF 73 Query: 74 ETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQL 133 + LF GT++ V+PREVVK L NAAAVI AHNHPSGE+TPSQADK +T RL + L L Sbjct: 74 KELFQGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGESTPSQADKRITTRLKEALAL 133 Query: 134 VDIRVPDHLIVGGRQIYSFAEHGLL 158 +D++V DH++VG SFAE GL+ Sbjct: 134 IDVQVLDHIVVG-ETCVSFAERGLI 157 >UniRef50_Q46A65 UPF0758 protein Mbar_A2303 n=2 Tax=Methanosarcinaceae RepID=Y2303_METBF Length = 229 Score = 166 bits (421), Expect = 2e-40, Method: Composition-based stats. Identities = 50/150 (33%), Positives = 84/150 (56%) Query: 9 GEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQN 68 G+ + R L+ + EP S V + M ++E+F L LD +N Sbjct: 79 GKAKAAQIAAVFELARRLETFVEEPKRKVCSPKDVYTLMYPKMREQKKEKFITLCLDTKN 138 Query: 69 QLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLV 128 Q++ E + G++N + VHPREV K AL ++A+VI+ HNHPSG+ +PS+ D +T+++V Sbjct: 139 QILKEEVVSIGSLNASIVHPREVFKSALMESSASVIMIHNHPSGDPSPSREDIMVTEKMV 198 Query: 129 QVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 + +L+ I V DH+I+G + S + G + Sbjct: 199 EGGKLLGIDVLDHIIIGEGRYVSLKDEGFV 228 >UniRef50_C9L5T8 DNA repair protein RadC n=4 Tax=Clostridiales RepID=C9L5T8_RUMHA Length = 231 Score = 166 bits (420), Expect = 3e-40, Method: Composition-based stats. Identities = 46/150 (30%), Positives = 83/150 (55%) Query: 9 GEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQN 68 G++ + I + + + G++F ++ ++ + E+E + LD +N Sbjct: 82 GKVKAIQIKCIGELSKRIATATAKKGLSFRHPASIADYYMEQLRHEEQELLICMMLDTKN 141 Query: 69 QLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLV 128 L+ E +F GT+N + +PRE+ A+ ++A ++L HNHPSG+ TPSQAD TQR+ Sbjct: 142 HLLGDEMIFKGTVNSSLANPREIFLSAVSYHAVGILLVHNHPSGDCTPSQADVDFTQRVK 201 Query: 129 QVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 + +L+ I + DH+I+G + SF E G+ Sbjct: 202 EAGELLGIPLLDHIIIGDCKYLSFREQGIF 231 >UniRef50_C8VVH2 DNA repair protein RadC n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VVH2_DESAS Length = 227 Score = 166 bits (420), Expect = 3e-40, Method: Composition-based stats. Identities = 47/150 (31%), Positives = 81/150 (54%) Query: 9 GEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQN 68 G + + + + + + ++ M ++RE F+ L L+ +N Sbjct: 78 GNSKALALKAAVEIGQRIAKTKAMECPSVKTPDDAVNYVMEEMRYMDREHFKALLLNTKN 137 Query: 69 QLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLV 128 ++I+ E + GT+N + VHPRE+ K A+ +AAA+IL HNHPSG+ TPS+ D +T+RL Sbjct: 138 RVISLEAISVGTLNSSNVHPRELFKVAIKRSAAAIILIHNHPSGDPTPSREDIDVTERLG 197 Query: 129 QVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 + ++V I V DH+++G + S GL Sbjct: 198 EAGKIVGIDVLDHIVIGDGKFVSLKAKGLF 227 >UniRef50_C6J5M2 DNA repair protein RadC n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J5M2_9BACL Length = 162 Score = 165 bits (419), Expect = 3e-40, Method: Composition-based stats. Identities = 52/157 (33%), Positives = 88/157 (56%), Gaps = 3/157 (1%) Query: 2 KQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRV 61 QL+ LP Q +L++ + ++ E + V + + + L++E F + Sbjct: 9 SQLNALPPRRRKQAEKLLELIRKVME---GEKDHYIHTPADVFQAVATDLVGLDKEHFMI 65 Query: 62 LYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADK 121 L L+ +N++++ E + GT+N VHPREV K A+ AA++I HNHPSG+ PS DK Sbjct: 66 LILNTKNRILSKEVISIGTLNSAIVHPREVFKPAIIKGAASIICVHNHPSGDPAPSSEDK 125 Query: 122 TLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 LT+RL+Q +++ I V DH+++G S E G++ Sbjct: 126 KLTERLIQAGEIIGIDVLDHVVIGTEGYVSLKEQGMI 162 >UniRef50_D1JB12 Probable DNA repair protein radC homolog n=2 Tax=uncultured archaeon RepID=D1JB12_9ARCH Length = 330 Score = 165 bits (418), Expect = 5e-40, Method: Composition-based stats. Identities = 58/150 (38%), Positives = 89/150 (59%) Query: 9 GEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQN 68 G + +Q + + ++ V ++L L M L+ E F+V++LD+ N Sbjct: 162 GAAKVAQIKAVQALAEEYLKESMKSVSKVRNSKEVFDYLYLTMRDLKIEIFKVIFLDSAN 221 Query: 69 QLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLV 128 Q I E LF GT+N + V+PRE+VK A++ NAA++I HNHPSG+ TPS +D+ +T+ L+ Sbjct: 222 QTIDDENLFEGTLNASSVYPREIVKSAVNKNAASLIFVHNHPSGDPTPSGSDRAITEDLI 281 Query: 129 QVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 LV I V DH+I+G +SFA+ GLL Sbjct: 282 YACNLVQITVLDHIIIGDNVYFSFADEGLL 311 >UniRef50_Q47ZW8 DNA repair protein, RadC family protein n=20 Tax=Gammaproteobacteria RepID=Q47ZW8_COLP3 Length = 158 Score = 165 bits (418), Expect = 5e-40, Method: Composition-based stats. Identities = 70/145 (48%), Positives = 95/145 (65%), Gaps = 2/145 (1%) Query: 14 QDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAH 73 + +++ A L + AFTS+ A +++LR +A E E F V+ LDNQ+Q+I Sbjct: 16 TENQILDAAAEILACK-YVRKDAFTSSQATKDFLRFKLANKEHEIFAVMLLDNQHQMIDF 74 Query: 74 ETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQL 133 LF GTI+ + V+PREVVK L NAAAVIL HNHPSG +PS ADK +T+RL + L L Sbjct: 75 VELFRGTIDASAVYPREVVKTVLLENAAAVILTHNHPSGLNSPSIADKDITKRLQEALAL 134 Query: 134 VDIRVPDHLIVGGRQIYSFAEHGLL 158 +D+RV DH+I+G SFAE+GLL Sbjct: 135 IDVRVLDHIIIGEGTY-SFAENGLL 158 >UniRef50_Q46XP0 UPF0758 protein Reut_A2732 n=12 Tax=Proteobacteria RepID=Y2732_RALEJ Length = 228 Score = 165 bits (418), Expect = 5e-40, Method: Composition-based stats. Identities = 72/145 (49%), Positives = 98/145 (67%), Gaps = 1/145 (0%) Query: 14 QDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAH 73 Q + + + A R L L P S AVR +LRL +A L +E F L+LD +N++IA Sbjct: 81 QLQAVPELARRMLAESLELPS-GLDSPAAVRSYLRLTLAPLAQEVFVCLFLDTRNRMIAS 139 Query: 74 ETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQL 133 E LF GT+N+T V+PREV +RAL NAA+VI+AHNHPSG TPSQ+D +T+ L + L L Sbjct: 140 EELFRGTLNQTAVYPREVARRALAHNAASVIVAHNHPSGCCTPSQSDLQMTRMLARALDL 199 Query: 134 VDIRVPDHLIVGGRQIYSFAEHGLL 158 +D+R+ DH +V G ++SFAEHG L Sbjct: 200 IDVRLLDHFVVAGTHVHSFAEHGEL 224 >UniRef50_Q3JDF2 DNA repair protein RadC n=4 Tax=Gammaproteobacteria RepID=Q3JDF2_NITOC Length = 171 Score = 164 bits (417), Expect = 6e-40, Method: Composition-based stats. Identities = 69/146 (47%), Positives = 95/146 (65%), Gaps = 1/146 (0%) Query: 13 PQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIA 72 P+ + L++ A L LH+PGV S + R++LR+ +A + E F LYLDN++++I Sbjct: 27 PEKQSLLELAFAVL-HDLHQPGVELPSPNHTRDFLRMLLAERKAEVFGCLYLDNRHRVIE 85 Query: 73 HETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQ 132 LF GTI+ V+PR VV++AL NAAAV+ HNHPSG PS AD+ +T+RL + L Sbjct: 86 TVELFQGTIDGASVYPRVVVQQALSVNAAAVMFFHNHPSGVAEPSNADEAITRRLKEALA 145 Query: 133 LVDIRVPDHLIVGGRQIYSFAEHGLL 158 LVDIRV DH +V + SFAE GLL Sbjct: 146 LVDIRVLDHFVVTAGESISFAERGLL 171 >UniRef50_B1HKP9 DNA repair protein n=1 Tax=Burkholderia pseudomallei S13 RepID=B1HKP9_BURPS Length = 165 Score = 164 bits (417), Expect = 6e-40, Method: Composition-based stats. Identities = 65/156 (41%), Positives = 97/156 (62%) Query: 3 QLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVL 62 + +T + +LI A+ L+R L + G A TS ++LRL M +RE F V+ Sbjct: 10 RPPLTSSTLTSAEHQLIHDAIAVLERRLFQRGPALTSPQNAIDYLRLTMTREDREVFTVI 69 Query: 63 YLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKT 122 +LD +++IA E LF G I+ + R ++ RA+ N+ A+I+AHNHPSGET PS AD+ Sbjct: 70 FLDTHHRVIAVEPLFYGGIDGAHISSRVILHRAILLNSTAIIVAHNHPSGETQPSPADQR 129 Query: 123 LTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 LT L +L+LVD+R+ DH I+G + +SFA+ GLL Sbjct: 130 LTAELAALLRLVDMRLLDHFIIGRGEPFSFAQAGLL 165 >UniRef50_C8WXL6 DNA repair protein RadC n=3 Tax=Alicyclobacillus acidocaldarius RepID=C8WXL6_ALIAD Length = 233 Score = 164 bits (416), Expect = 8e-40, Method: Composition-based stats. Identities = 46/161 (28%), Positives = 89/161 (55%), Gaps = 4/161 (2%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEP---GVAFTSTHAVREWLRLHMAALERE 57 + +L +PG + P I A+ R +P + +++ + L++E Sbjct: 70 VAELLSVPG-IGPAKAVQIAAAVELGRRVARKPPGEKRQIRTAEDAAKYVMDRLRYLKKE 128 Query: 58 EFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPS 117 F L LD +++++A +T G+++ + VHPRE+ +RA+ +A++++ HNHPSG+ +PS Sbjct: 129 HFVTLLLDTKHRVLAEDTSSVGSLDASIVHPREIFRRAIRISASSILCIHNHPSGDPSPS 188 Query: 118 QADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D +T+RLV+ +++ I V DH+++G + S G L Sbjct: 189 PEDIAVTKRLVEAGRVLGIEVLDHIVIGDGRFVSLRAEGYL 229 >UniRef50_A4W511 UPF0758 protein Ent638_0101 n=3 Tax=Enterobacteriaceae RepID=Y101_ENT38 Length = 221 Score = 164 bits (416), Expect = 8e-40, Method: Composition-based stats. Identities = 59/145 (40%), Positives = 88/145 (60%) Query: 14 QDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAH 73 + I R S +++L+ ++ ERE F V++LDNQ++++ H Sbjct: 77 AQLKGIAELARRYHSVRVLGDNPLLSPEMTKDFLQSQLSDAEREVFMVIFLDNQHRVVKH 136 Query: 74 ETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQL 133 +F+GT+ EVHPRE+V+ A+ NAAAVILAHNHPSG PS+ADK +T+R+++ Q Sbjct: 137 SRMFSGTLRHVEVHPREIVREAIKVNAAAVILAHNHPSGCAEPSKADKDITERIIKCCQF 196 Query: 134 VDIRVPDHLIVGGRQIYSFAEHGLL 158 +DI V DH I+G + SFAE G + Sbjct: 197 MDIHVLDHFIIGRGEYVSFAEQGWI 221 >UniRef50_C6LCB9 DNA repair protein RadC n=3 Tax=Clostridiales RepID=C6LCB9_9FIRM Length = 231 Score = 164 bits (416), Expect = 9e-40, Method: Composition-based stats. Identities = 50/150 (33%), Positives = 84/150 (56%) Query: 9 GEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQN 68 G++ + I R + + + G FTS A+ ++ L++E +L D + Sbjct: 81 GKVKAVQIQCITELSRRIAKSVASEGNTFTSAQAIADYYMEDFRHLQQERVFLLSFDTKG 140 Query: 69 QLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLV 128 +L++ +T+ GT+N++ V PRE+ AL A VIL HNHPSG PS D+ LT R+ Sbjct: 141 ELLSEKTISVGTVNQSCVSPREIFLEALSCRAVYVILLHNHPSGNPQPSPEDRLLTMRVH 200 Query: 129 QVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 + +L++I + DH+I+G R+ +SF E G + Sbjct: 201 ESGKLLEIPLMDHIILGDRRYFSFREEGFI 230 >UniRef50_Q7VMM9 Conserved possible DNA repair protein n=1 Tax=Haemophilus ducreyi RepID=Q7VMM9_HAEDU Length = 157 Score = 163 bits (414), Expect = 1e-39, Method: Composition-based stats. Identities = 68/156 (43%), Positives = 93/156 (59%) Query: 3 QLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVL 62 QLS +M Q + L + LR + +F E+ ++ + ERE F VL Sbjct: 2 QLSTQHQDMLNQAKALYENVLRETGIRSYASNPSFGDEKEASEYCQMQLGFEEREVFGVL 61 Query: 63 YLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKT 122 + D QN+LI E LF GTIN+ +HPRE+VK+AL N++AVIL HNHPSG+ TPSQ+DK Sbjct: 62 FWDTQNRLIRFEKLFFGTINQASIHPREIVKKALELNSSAVILTHNHPSGQVTPSQSDKQ 121 Query: 123 LTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 T ++ Q QL+D+ V DH+IV YSF H L+ Sbjct: 122 TTAKIKQACQLIDVNVLDHIIVSATDTYSFCMHQLM 157 >UniRef50_B0T9R6 DNA repair protein RadC n=4 Tax=Alphaproteobacteria RepID=B0T9R6_CAUSK Length = 253 Score = 163 bits (414), Expect = 1e-39, Method: Composition-based stats. Identities = 70/158 (44%), Positives = 96/158 (60%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 + LS D +LI A R L +S A+ ++L+L MA ERE FR Sbjct: 96 LAALSTFVDTRVGIDLQLIYDAARRLAAAELPGRCVVSSWTALIDYLKLTMAHCEREAFR 155 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 VL+LD +NQLIA E L GT++ V+PREVV+RAL +A+AVIL HNHPSG+ TPS AD Sbjct: 156 VLFLDKKNQLIADEILNHGTVDHAPVYPREVVRRALEVSASAVILVHNHPSGDQTPSSAD 215 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +T+++V + + I V DH+IVG ++ SF GL+ Sbjct: 216 IEMTKKVVDAARTLGIAVHDHVIVGRAEVASFKALGLI 253 >UniRef50_B3E339 UPF0758 protein Glov_0523 n=8 Tax=Desulfuromonadales RepID=Y523_GEOLS Length = 230 Score = 163 bits (413), Expect = 2e-39, Method: Composition-based stats. Identities = 53/161 (32%), Positives = 85/161 (52%), Gaps = 4/161 (2%) Query: 1 MKQLSFLPGEMTPQDRRLIQRAL---RALDRHLHEPGVAFTSTHAVREWLRLHMAALERE 57 + +L + G + I+ A + E FTS V ++ + +E Sbjct: 71 LNELQQIKG-LGLAKAASIKAAFTLGKRFQARRLETLERFTSPAQVFDFFHHELRDNRKE 129 Query: 58 EFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPS 117 F L LD +N++ + G++N++ VHPREV A+ +AAAVI HNHPSG+ PS Sbjct: 130 LFLTLLLDGKNRITRKVQVSEGSLNQSIVHPREVFAPAVRESAAAVIFIHNHPSGDPAPS 189 Query: 118 QADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 + D +T+RL + +++ I+V DH+I+G +SF E GLL Sbjct: 190 REDHEITRRLNEAGEILGIKVLDHIIIGDGAYFSFVESGLL 230 >UniRef50_Q8UEZ6 UPF0758 protein Atu1607 n=100 Tax=Alphaproteobacteria RepID=Y1607_AGRT5 Length = 280 Score = 163 bits (413), Expect = 2e-39, Method: Composition-based stats. Identities = 55/150 (36%), Positives = 86/150 (57%) Query: 9 GEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQN 68 GE D +L+ + + + S +V ++ MA RE+FR+L+LD +N Sbjct: 131 GEAVALDLKLVASVSQRMLKSEIRNKQVLGSWSSVIDYCHAAMAHETREQFRILFLDKRN 190 Query: 69 QLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLV 128 LIA E GT++ T V+PRE+V+RAL ++ A+IL HNHPSG+ TPS+AD +T+ ++ Sbjct: 191 VLIADEVQGQGTVDHTPVYPREIVRRALELSSTALILIHNHPSGDPTPSRADIEMTKTII 250 Query: 129 QVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 + + I V DH+I+G SF L+ Sbjct: 251 DTAKPLGITVHDHIIIGKDGHASFKGLRLI 280 >UniRef50_Q3BQ28 RadC family DNA repair protein n=5 Tax=Xanthomonas RepID=Q3BQ28_XANC5 Length = 187 Score = 162 bits (412), Expect = 2e-39, Method: Composition-based stats. Identities = 67/140 (47%), Positives = 88/140 (62%), Gaps = 1/140 (0%) Query: 18 LIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLF 77 ++ A L++ L G S ++L A L E F V++LD ++Q++A E LF Sbjct: 48 ILLAAATILEQRLQRQG-KIHSPDQAGDYLISRCAHLPHEVFGVVFLDIKHQILATEHLF 106 Query: 78 TGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIR 137 GTI+ EVHPR V KRAL NAAAVIL HNHPSG PS+AD+ +T+RL + L L+DIR Sbjct: 107 FGTIDGCEVHPRVVAKRALDLNAAAVILFHNHPSGNPEPSEADRKVTERLQKALSLLDIR 166 Query: 138 VPDHLIVGGRQIYSFAEHGL 157 V DHL++GGRQ S A G Sbjct: 167 VLDHLVIGGRQHISLAARGW 186 >UniRef50_Q2SAN5 DNA repair protein n=2 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SAN5_HAHCH Length = 183 Score = 162 bits (412), Expect = 2e-39, Method: Composition-based stats. Identities = 71/159 (44%), Positives = 96/159 (60%), Gaps = 4/159 (2%) Query: 4 LSFLPGEMT---PQDRRLIQRAL-RALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEF 59 L+ GE T P D ++ +A RAL + V+E+L +H+A RE F Sbjct: 13 LNRRTGEFTLSAPLDSDIVLKAAKRALAQRFKRHSCHMDDPGKVKEYLMMHLAPEPRETF 72 Query: 60 RVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQA 119 L+LD QN+LIA+E LF G I+ ++PREVVK AL NAA VI+AHNHPSG+ PS Sbjct: 73 VGLFLDTQNRLIAYEVLFRGAIDEAHIYPREVVKAALRHNAAKVIVAHNHPSGDPKPSVN 132 Query: 120 DKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D+ +T RL+Q L LV+I + DH +VGG Q+ S A G+ Sbjct: 133 DQLITYRLLQALMLVEIPLIDHFVVGGDQVVSMAAQGIF 171 >UniRef50_B2UAP0 UPF0758 protein Rpic_2712 n=3 Tax=Burkholderiaceae RepID=Y2712_RALPJ Length = 224 Score = 162 bits (412), Expect = 3e-39, Method: Composition-based stats. Identities = 67/146 (45%), Positives = 93/146 (63%), Gaps = 1/146 (0%) Query: 13 PQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIA 72 Q L++ A RAL + G F S +V+++LRL + E F +LD +++LIA Sbjct: 80 AQLHALLEVARRALKEDFTQ-GQTFESAQSVKDFLRLTLGHRPHEVFACFFLDVRHRLIA 138 Query: 73 HETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQ 132 E LF GT+ V+PRE+ KRALH NAAAVILAHNHP+G T PS++D LT+ L + L Sbjct: 139 WEELFRGTLTEARVYPREIAKRALHHNAAAVILAHNHPTGNTEPSESDVILTRELCRALA 198 Query: 133 LVDIRVPDHLIVGGRQIYSFAEHGLL 158 ++D+ V DH+IVG +Y F EHG + Sbjct: 199 MLDVIVLDHMIVGRNHVYGFLEHGKM 224 >UniRef50_Q2G8R8 DNA repair protein RadC n=5 Tax=Sphingomonadales RepID=Q2G8R8_NOVAD Length = 245 Score = 162 bits (412), Expect = 3e-39, Method: Composition-based stats. Identities = 53/150 (35%), Positives = 89/150 (59%) Query: 9 GEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQN 68 GE + R++ A R L R + ++ A+ ++L + MA L E RVLYL++QN Sbjct: 96 GETSAAALRIVALAARRLARTVVREQPILSNWQALLDYLHIDMAHLTVERVRVLYLNSQN 155 Query: 69 QLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLV 128 LI + GT++ + ++ REV+++A+ AAA+IL HNHPSG PS+AD +TQ+++ Sbjct: 156 MLILDHLVSEGTLDESPIYTREVIRKAMDVGAAAMILVHNHPSGSPKPSRADIQVTQKVM 215 Query: 129 QVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 + +L+ + V DH+++G S GL+ Sbjct: 216 EAARLMGMTVHDHIVIGREGHTSLKAQGLI 245 >UniRef50_B1YJT0 DNA repair protein RadC n=2 Tax=Exiguobacterium RepID=B1YJT0_EXIS2 Length = 217 Score = 162 bits (411), Expect = 3e-39, Method: Composition-based stats. Identities = 53/158 (33%), Positives = 84/158 (53%), Gaps = 4/158 (2%) Query: 4 LSFLPGEMTPQDRRLIQRALRALDRHLHEPGVA---FTSTHAVREWLRLHMAALEREEFR 60 L PG + I L R + EP S E L M ++E F Sbjct: 61 LEKAPG-VGKAKALQIMAGLELGRRLVTEPKWVRPVVRSPDDAAELLMEEMRLYQQEHFI 119 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 LYL+ +N++I+ +TLF G +N + VHPR++ + A+ +AA+ I HNHPSG+ TPS+ D Sbjct: 120 CLYLNTKNEVISKKTLFIGGLNTSIVHPRDIFREAIRCSAASFIAVHNHPSGDPTPSRED 179 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +++R+V+ +L+ I DHL++G Q S + G + Sbjct: 180 IEVSERMVEAGRLIGISCIDHLVIGHGQFISMKQRGFM 217 >UniRef50_B9E733 DNA repair protein RadC homolog n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E733_MACCJ Length = 223 Score = 162 bits (411), Expect = 3e-39, Method: Composition-based stats. Identities = 51/147 (34%), Positives = 80/147 (54%), Gaps = 1/147 (0%) Query: 12 TPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLI 71 +I+ A+R + H E + S L + + +E F VL L+ +N ++ Sbjct: 78 AAMILAIIELAIR-MHTHTKETRIKVKSPACAANLLMERLRYMTQEHFIVLSLNTKNIVM 136 Query: 72 AHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVL 131 T+F G++N + VHPREV K A+ +AAA+I+ HNHPSG+ PS D T+RL++ Sbjct: 137 HESTIFIGSLNASIVHPREVFKEAVKRSAAAIIVVHNHPSGDPEPSYEDIEATKRLIKCG 196 Query: 132 QLVDIRVPDHLIVGGRQIYSFAEHGLL 158 ++ I V DH+I+G S E G+L Sbjct: 197 EIFGIDVLDHIIIGDGYYVSIKEKGIL 223 >UniRef50_A8R890 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8R890_9FIRM Length = 227 Score = 162 bits (410), Expect = 4e-39, Method: Composition-based stats. Identities = 56/162 (34%), Positives = 92/162 (56%), Gaps = 6/162 (3%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLH----EPGVAFTSTHAVREWLRLHMAALER 56 + +L + G Q + + +A AL + + + A +S + EWL + ++ Sbjct: 65 LTELMEIDG--IKQAKAIELQAAFALGKRIAFDVLKESEAISSPQKLSEWLMQQIGFQQQ 122 Query: 57 EEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTP 116 E F V++L+ +NQ++A++TLF GT+ VHPRE+ K A+ A +I AHNHPSG Sbjct: 123 EHFLVVFLNQRNQILAYKTLFVGTLTSANVHPREIFKEAMRIGCAKIICAHNHPSGNPQV 182 Query: 117 SQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 S AD +TQ++++ QLV I + DH++VGG + S E G + Sbjct: 183 SDADIAITQQIMECGQLVSIPLLDHIVVGGNRYVSLREEGYM 224 >UniRef50_B9ECC3 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9ECC3_MACCJ Length = 150 Score = 161 bits (408), Expect = 6e-39, Method: Composition-based stats. Identities = 45/136 (33%), Positives = 77/136 (56%) Query: 23 LRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTIN 82 ++ R + + S V ++ + + RE+F ++ L+ +N++ T+F GTIN Sbjct: 15 VKQYYRKTRDERIKVKSPDNVADFCKKLIGNSVREKFLLVGLNTKNEITFVYTVFIGTIN 74 Query: 83 RTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHL 142 + +HPREV + A+ + A++ILAH HPS + TPS D+ T+R + +L+ I V DH+ Sbjct: 75 MSPIHPREVFQVAILNSCASIILAHCHPSDDPTPSSEDREATKRFEECGELLGIPVLDHI 134 Query: 143 IVGGRQIYSFAEHGLL 158 IV +SF E+ L Sbjct: 135 IVTESSYFSFRENNLF 150 >UniRef50_A6QHJ5 UPF0758 protein NWMN_1555 n=52 Tax=Staphylococcus RepID=Y1555_STAAE Length = 228 Score = 160 bits (406), Expect = 1e-38, Method: Composition-based stats. Identities = 47/135 (34%), Positives = 72/135 (53%) Query: 24 RALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINR 83 + R + T V +++ M L +E F +L L+++N +I +F GT+N Sbjct: 90 ERMGRRAENNRIKITQPSDVADYMIPTMKDLTQEHFVILLLNSKNVVIKETCVFKGTLNS 149 Query: 84 TEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLI 143 + VHPRE+ A+ NA A+I HNHPSG+ TPSQ D T RL + ++ I + DH+I Sbjct: 150 SIVHPREIFSIAVRENANAIIAVHNHPSGDVTPSQEDIITTMRLKECGLILGIDLLDHII 209 Query: 144 VGGRQIYSFAEHGLL 158 +G + S E G Sbjct: 210 IGDNRFTSLVEAGYF 224 >UniRef50_C7RDS9 DNA repair protein RadC n=3 Tax=Anaerococcus RepID=C7RDS9_ANAPD Length = 228 Score = 160 bits (406), Expect = 1e-38, Method: Composition-based stats. Identities = 55/161 (34%), Positives = 91/161 (56%), Gaps = 3/161 (1%) Query: 1 MKQLSFLPGEMTPQDRRLI---QRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALERE 57 +K+L+ + G + R++ Q R +R L + TS+ V + + ++ L++E Sbjct: 68 VKELTDIKGIKQAKATRVVAGLQLGKRINERVLDKKIEKITSSKDVYDIMSPRLSNLKKE 127 Query: 58 EFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPS 117 F + LD++N +IA E + G + T V+PREV K A+ +A ++IL HNHPSG PS Sbjct: 128 YFYAILLDSKNVIIAKEVISIGDLGSTVVNPREVFKPAIKKSAKSMILVHNHPSGNPKPS 187 Query: 118 QADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D +T RL + ++DI+V DH+++G YSF + G L Sbjct: 188 TEDFLITDRLAEAGDILDIKVLDHIVIGNSSYYSFKKEGNL 228 >UniRef50_B4X5D3 DNA repair protein RadC n=4 Tax=Alcanivorax sp. DG881 RepID=B4X5D3_9GAMM Length = 164 Score = 160 bits (406), Expect = 1e-38, Method: Composition-based stats. Identities = 57/125 (45%), Positives = 84/125 (67%) Query: 34 GVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVK 93 A T+ V ++L++ +A + E F ++L+N++++++ E LF+GTI+ V+PR VV+ Sbjct: 40 REALTAPTDVAQFLQMALAQEKNEVFAAIFLNNKHKVLSFEPLFSGTIDGAAVYPRVVVQ 99 Query: 94 RALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFA 153 +AL NAAAVI AHNHPSG PSQAD+T+T RL L L+D+RV DH +V + S A Sbjct: 100 QALACNAAAVIFAHNHPSGCCEPSQADRTITTRLKDALALIDVRVLDHFVVSRSEWVSLA 159 Query: 154 EHGLL 158 E G L Sbjct: 160 ERGWL 164 >UniRef50_B5YIR9 DNA repair protein n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIR9_THEYD Length = 224 Score = 160 bits (406), Expect = 1e-38, Method: Composition-based stats. Identities = 51/160 (31%), Positives = 86/160 (53%), Gaps = 3/160 (1%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHL--HEPGVAFTSTHAVREWLRLHMAALEREE 58 + +L G + I+ + R L F S V + + L++E Sbjct: 66 ISELKSFKG-LGIAKIAQIKASFELGKRALCEKSQEQFFNSAEIVYNYFFPKLNGLKKEV 124 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 F L LD + +LI + GT+N++ +HPREV K A+ +A AVIL HNHPSG+ TPS+ Sbjct: 125 FITLLLDTKLRLIREVKVSEGTLNQSLIHPREVFKDAVKESAYAVILIHNHPSGDPTPSE 184 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D +T++L + ++++I + DH+I+G + +S E G++ Sbjct: 185 QDIEITKKLKKASEILEIPILDHVIIGSGKYFSMKERGVV 224 >UniRef50_A5UDB6 UPF0758 protein CGSHiEE_07200 n=30 Tax=Gammaproteobacteria RepID=Y7200_HAEIE Length = 221 Score = 160 bits (406), Expect = 1e-38, Method: Composition-based stats. Identities = 63/144 (43%), Positives = 88/144 (61%) Query: 15 DRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHE 74 + I + + V+ +L + ERE F VL+LDNQ++LI E Sbjct: 78 QLQAITEMTKRYLKQEMLSTPIINDPETVKLFLLTELQHEEREVFMVLFLDNQHRLIKKE 137 Query: 75 TLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLV 134 LF GTIN + V+PRE++K AL+ NAAA+ILAHNHPSG T PS +D+ +T+++ +L+ Sbjct: 138 RLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGVTEPSYSDQLITKKIQDAAELM 197 Query: 135 DIRVPDHLIVGGRQIYSFAEHGLL 158 +I V DHLIVG YSFAE+ LL Sbjct: 198 EICVLDHLIVGKSDCYSFAENCLL 221 >UniRef50_A4J365 DNA repair protein RadC n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J365_DESRM Length = 231 Score = 160 bits (405), Expect = 1e-38, Method: Composition-based stats. Identities = 53/159 (33%), Positives = 86/159 (54%), Gaps = 2/159 (1%) Query: 2 KQLSFLPGEMTPQDRRLIQR--ALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEF 59 ++L PG RL+ + L + ++ L++E F Sbjct: 73 EELMTYPGIGPSMAARLMAAFALTKKLASAGASENTVIRCPEDIFYLMKNEAKLLDKEYF 132 Query: 60 RVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQA 119 L L+ +N +I ET+ GT+N + VHPRE+ K+A+ +AAAVIL HNHPSG+ TPS+ Sbjct: 133 SALLLNTKNHVIGKETISIGTLNSSMVHPRELFKQAIRRSAAAVILVHNHPSGDPTPSRE 192 Query: 120 DKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D +LT+RL++ +++ I V DH+++G + S GL+ Sbjct: 193 DISLTKRLIEAGEIIGIDVLDHIVLGFDKFTSLKSKGLI 231 >UniRef50_Q21TE2 UPF0758 protein Rfer_3252 n=12 Tax=cellular organisms RepID=Y3252_RHOFD Length = 234 Score = 160 bits (405), Expect = 1e-38, Method: Composition-based stats. Identities = 74/158 (46%), Positives = 103/158 (65%), Gaps = 1/158 (0%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 +K++ L + +++ + RAL + L E F + AV+ +L+LH+AA E F Sbjct: 78 LKRIKGLGPAKRAELVAVLELSRRALAQQLKER-TIFATPDAVKHYLQLHLAAKPHEVFA 136 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 VL+LD QN+L+A E LF GT+ +T V+PREVV RALH A++V+LAHNHPSG PS+AD Sbjct: 137 VLFLDVQNRLLALEELFRGTLTQTSVYPREVVLRALHHQASSVVLAHNHPSGTVQPSRAD 196 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 + LTQ L L L+D+RV DH+IV + S AE GLL Sbjct: 197 EMLTQTLKTTLALIDVRVLDHVIVAPGEALSMAERGLL 234 >UniRef50_A1UT15 DNA repair protein, RadC family n=3 Tax=Bartonella RepID=A1UT15_BARBK Length = 265 Score = 160 bits (405), Expect = 2e-38, Method: Composition-based stats. Identities = 59/150 (39%), Positives = 85/150 (56%) Query: 9 GEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQN 68 G + D ++I R F+S V + + MA RE+FR+L+LD ++ Sbjct: 116 GPASAIDLKIISAVAGRFARAQLSKRDIFSSWDKVLAYCKAVMAHETREQFRILFLDKKH 175 Query: 69 QLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLV 128 L++ E TGTI+RT V+PREVV RAL +A+ +IL HNHPSG+ +PSQ D ++T RL Sbjct: 176 GLLSDEVQQTGTIDRTPVYPREVVSRALELSASGIILVHNHPSGDASPSQEDISMTYRLK 235 Query: 129 QVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 V +DI + DHLI+ SF L+ Sbjct: 236 DVANALDITLHDHLIIARNDYISFKALKLI 265 >UniRef50_C9NPT2 DNA repair protein RadC n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NPT2_9VIBR Length = 224 Score = 160 bits (405), Expect = 2e-38, Method: Composition-based stats. Identities = 57/152 (37%), Positives = 86/152 (56%), Gaps = 1/152 (0%) Query: 7 LPGEMTPQDRRLIQRALRALDRHLHEPGV-AFTSTHAVREWLRLHMAALEREEFRVLYLD 65 + D+ ++Q A + R+ + + V+ + + H+A ++RE F L+LD Sbjct: 72 QSSSFSAHDQAVLQEAKDIIARYWAARSPNVLNAPNLVKMYCQCHLAHVDREVFGALWLD 131 Query: 66 NQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQ 125 N + + LF G++N VH REV++ L NAAAVI HNHPSG+ +PSQAD+ LT Sbjct: 132 NGLRALGTVDLFAGSLNHAAVHTREVLRSGLRLNAAAVIFYHNHPSGDPSPSQADRQLTN 191 Query: 126 RLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGL 157 L VL ++IRV DH++V + SFAE G Sbjct: 192 HLKDVLGQIEIRVLDHMVVSLSGVVSFAERGW 223 >UniRef50_B4Y2Y7 RadC n=1 Tax=Aquabacterium sp. PL1F5 RepID=B4Y2Y7_9BURK Length = 198 Score = 160 bits (405), Expect = 2e-38, Method: Composition-based stats. Identities = 74/146 (50%), Positives = 91/146 (62%) Query: 13 PQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIA 72 + + L R G S V++WL ++ A LE E F VLYLD Q LI Sbjct: 53 AHKLSIARELLLRNMRSKMLEGPVMASPKVVKDWLSMYCAGLEHEVFLVLYLDAQQVLIE 112 Query: 73 HETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQ 132 E LF GT+ +T V+PREVVK AL NAAAV+LAHNHPSG+ +PS AD+ LTQ L L Sbjct: 113 AEELFRGTLTQTSVYPREVVKNALAHNAAAVLLAHNHPSGQLSPSGADELLTQTLKSSLM 172 Query: 133 LVDIRVPDHLIVGGRQIYSFAEHGLL 158 +VD+RV DH IVGG ++ SFAE GLL Sbjct: 173 MVDVRVLDHFIVGGDRVLSFAEQGLL 198 >UniRef50_Q1AVT6 UPF0758 protein Rxyl_1530 n=3 Tax=Bacteria RepID=Y1530_RUBXD Length = 227 Score = 160 bits (405), Expect = 2e-38, Method: Composition-based stats. Identities = 59/161 (36%), Positives = 91/161 (56%), Gaps = 5/161 (3%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRH--LHEPG-VAFTSTHAVREWLRLHMAALERE 57 + +L + G + ++ AL R PG +S V LR +A L+RE Sbjct: 69 VHELKQVKG-IGEAKACILLAALELARRLSVARNPGRPVISSPADVDGLLRGRIANLDRE 127 Query: 58 EFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPS 117 F V+ L+ +N++I T+ GT++ + VHPREV K A+ +AA+V+LAHNHPSG PS Sbjct: 128 HFVVVLLNTKNEVIEAPTISVGTLSSSLVHPREVFKPAIRASAASVVLAHNHPSGRVEPS 187 Query: 118 QADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 + D+ +T R+ + ++ I V DH+IVG +S EHG+L Sbjct: 188 REDREVTGRVAEAGGIIGIEVLDHVIVG-EGYFSMKEHGML 227 >UniRef50_D0MFA0 DNA repair protein RadC n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MFA0_RHOM4 Length = 245 Score = 159 bits (403), Expect = 2e-38, Method: Composition-based stats. Identities = 51/161 (31%), Positives = 83/161 (51%), Gaps = 4/161 (2%) Query: 1 MKQLSFLPGEMTPQDRRLIQRAL---RALDRHLHEPGVAFTSTHAVREWLRLHMAALERE 57 +K+L+ + G + P + A R ++ + + V + L+RE Sbjct: 85 LKELTRVAG-VGPAKAVQLVAAFEIGRRVEAQRPGRRIQVRTPADVAACYGPLLRDLKRE 143 Query: 58 EFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPS 117 F+++ L+ N +IA T+ G + + V PR V +RA+ NAA +I HNHPSG PS Sbjct: 144 VFKIVLLNTANYIIADYTISEGGLAASIVEPRAVFQRAILDNAAGIICLHNHPSGNPEPS 203 Query: 118 QADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D +T++LV+ +L+ I V DH+I+ G S AE GL+ Sbjct: 204 AEDIRITRQLVEAGRLLGIPVHDHIIIAGTTYTSLAERGLM 244 >UniRef50_Q82ZX1 UPF0758 protein EF_2926 n=40 Tax=Firmicutes RepID=Y2926_ENTFA Length = 232 Score = 159 bits (403), Expect = 2e-38, Method: Composition-based stats. Identities = 47/161 (29%), Positives = 87/161 (54%), Gaps = 4/161 (2%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAF---TSTHAVREWLRLHMAALERE 57 + +L + G + ++ A+ R + F TS+ V + L M L++E Sbjct: 70 LNELMAIKG-IGQVKAIELRAAIELGCRIYQSSQIKFGKVTSSQQVAQRLLQEMKGLQQE 128 Query: 58 EFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPS 117 +YL+ +N +I +T+F G++N++ HPRE+ + A+ +++A ++LAHNHPSG TPS Sbjct: 129 HLICIYLNTKNDIIQQKTIFKGSLNQSIAHPREIFREAVKYSSARILLAHNHPSGNPTPS 188 Query: 118 QADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D T+R+ + +++ I++ DH+I+G S E Sbjct: 189 PQDIQFTKRMEECGEMMGIQLLDHIILGDSGYISLREENFF 229 >UniRef50_A5ZRS6 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=A5ZRS6_9FIRM Length = 236 Score = 159 bits (403), Expect = 3e-38, Method: Composition-based stats. Identities = 48/150 (32%), Positives = 77/150 (51%) Query: 9 GEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQN 68 G + + I + + + F S ++ + + E+E + LDNQN Sbjct: 82 GTVKAVQLKCIGELSKRIASTAARISLDFNSPDSIAAYYMEQLRHQEQEIMICMMLDNQN 141 Query: 69 QLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLV 128 L+ L GT+N T + PREV AL ++A +IL HNHP G PS+ DK +T+R+ Sbjct: 142 HLLGDTMLSKGTVNATLITPREVYLEALRYHAVNLILIHNHPGGNPAPSKCDKEITERIC 201 Query: 129 QVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 Q +++ I + DH+I+G + SF E GL+ Sbjct: 202 QAGEMLGINLLDHIIIGDHRYISFREEGLM 231 >UniRef50_Q2S8K4 DNA repair protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S8K4_HAHCH Length = 207 Score = 159 bits (403), Expect = 3e-38, Method: Composition-based stats. Identities = 68/143 (47%), Positives = 91/143 (63%), Gaps = 2/143 (1%) Query: 17 RLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETL 76 ++I A LD G AF A + +L L +A E+E F ++LDNQN+LI+ E L Sbjct: 64 KIISIAKHILDGRFFR-GKAFCDPDATKYYLVLQLAEHEQEVFACMFLDNQNRLISFEKL 122 Query: 77 FTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDI 136 F GTI++ V+PRE+VKRAL NAAAVILAHNHPSG + PS AD +T+ + L L+D+ Sbjct: 123 FYGTIDQASVYPREIVKRALMLNAAAVILAHNHPSGMSEPSVADIAMTKTVKSSLALIDV 182 Query: 137 RVPDHLIVG-GRQIYSFAEHGLL 158 RV DH++VG SF E G + Sbjct: 183 RVLDHIVVGSDGSSVSFIERGYM 205 >UniRef50_A5KLJ1 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=A5KLJ1_9FIRM Length = 233 Score = 159 bits (402), Expect = 3e-38, Method: Composition-based stats. Identities = 43/150 (28%), Positives = 75/150 (50%) Query: 9 GEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQN 68 G++ + + L R + F+S + ++ M RE ++++L+ + Sbjct: 82 GKVKAIQLVCLSELSKRLARTSTVGKLDFSSPRTIADYYMEDMRHRTREILKLIFLNTRC 141 Query: 69 QLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLV 128 +LI + GTI+ V PRE+ A NA +IL HNHP G+ TPS+ D +T+R+ Sbjct: 142 RLIGECNVSEGTIDSALVSPRELFIEAFKRNAYGIILLHNHPGGDPTPSREDVMITRRIY 201 Query: 129 QVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 + +L+ IR+ DH+++G S E G Sbjct: 202 EAGELLGIRLFDHIVIGDNCFVSMKEKGFF 231 >UniRef50_B4S9N8 DNA repair protein RadC n=1 Tax=Prosthecochloris aestuarii DSM 271 RepID=B4S9N8_PROA2 Length = 165 Score = 159 bits (402), Expect = 3e-38, Method: Composition-based stats. Identities = 57/125 (45%), Positives = 80/125 (64%), Gaps = 1/125 (0%) Query: 35 VAFTSTHAVREW-LRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVK 93 A T ++ ++ + EEF LYLD +N++I E + GT+N + VHPREV K Sbjct: 41 PAITRCDIAYDFFCKIGLQDKASEEFYALYLDTKNKIIGLEMISRGTLNASLVHPREVFK 100 Query: 94 RALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFA 153 A NA +++LAHNHPSG T PS ADK +T RLV+ +L+D++V DH+IVG + YSF Sbjct: 101 GAFLANANSIMLAHNHPSGNTEPSSADKLVTSRLVKAGKLLDLQVLDHIIVGDKGYYSFR 160 Query: 154 EHGLL 158 E GL+ Sbjct: 161 ESGLI 165 >UniRef50_A6TQH8 UPF0758 protein Amet_2289 n=54 Tax=cellular organisms RepID=Y2289_ALKMQ Length = 232 Score = 159 bits (402), Expect = 4e-38, Method: Composition-based stats. Identities = 52/161 (32%), Positives = 86/161 (53%), Gaps = 4/161 (2%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVA---FTSTHAVREWLRLHMAALERE 57 +++L + G + I A+ R V S V L M L++E Sbjct: 73 IEELQQIKG-VGIAKASQILAAVELGKRISLTSRVNHYRIKSPDDVSNLLMEEMRYLKKE 131 Query: 58 EFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPS 117 F + L+ ++++IA E + G++N + VHPREV A+ +++A+IL HNHPSG+ +PS Sbjct: 132 YFNIALLNTKHEVIAIENISIGSLNASIVHPREVFVVAIKRSSSAIILVHNHPSGDPSPS 191 Query: 118 QADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D +T+RLV+ +L+ I V DH+I+G YS E ++ Sbjct: 192 GEDIRITKRLVEAGKLLGIEVLDHIIIGDNVYYSLKEKSMM 232 >UniRef50_A1B298 DNA repair protein RadC n=7 Tax=Bacteria RepID=A1B298_PARDP Length = 162 Score = 158 bits (401), Expect = 5e-38, Method: Composition-based stats. Identities = 55/155 (35%), Positives = 89/155 (57%), Gaps = 2/155 (1%) Query: 4 LSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLY 63 + P + Q++ ++ A + L RHL++ V TS AV ++ L + + E F VLY Sbjct: 10 IEAQPHRFSAQEQAVVYEARQILLRHLNQNPV-LTSWQAVLDYCALTIRG-DVERFHVLY 67 Query: 64 LDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTL 123 LD +N+LI+ E L GT++ V+PREV++R L NA+A+I+ HNHP+G+ PS AD + Sbjct: 68 LDRRNRLISDECLAIGTVDHVPVYPREVLRRCLALNASALIIVHNHPAGDPEPSAADFAM 127 Query: 124 TQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 T+ + + + + DH+I G + S G L Sbjct: 128 TKEIRNASASLGVILHDHIITGAGRETSLRARGEL 162 >UniRef50_C5D8D2 DNA repair protein RadC n=4 Tax=Firmicutes RepID=C5D8D2_GEOSW Length = 169 Score = 158 bits (400), Expect = 5e-38, Method: Composition-based stats. Identities = 55/160 (34%), Positives = 84/160 (52%), Gaps = 3/160 (1%) Query: 2 KQLSFLPGEM---TPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREE 58 +QL L E+ P R I + + S + L+ + +RE+ Sbjct: 10 QQLELLEREVPVKQPAKRVNIVSLKLVRESSVLYRERQIKSPEDAYKLLKPFLVEADREK 69 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 F V+ LD +NQ A G++N + VHPREV K A+ N+A++I+AHNHPS + TPS+ Sbjct: 70 FVVVCLDTKNQPTAINICHIGSLNSSIVHPREVFKSAILSNSASIIVAHNHPSSDPTPSR 129 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D +T+RLV+ ++V I + DHLIV + S E G + Sbjct: 130 EDIEVTKRLVEAGRIVGIELLDHLIVCEEKFVSLKEKGYI 169 >UniRef50_C5SK46 DNA repair protein RadC n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SK46_9CAUL Length = 244 Score = 158 bits (400), Expect = 6e-38, Method: Composition-based stats. Identities = 55/146 (37%), Positives = 87/146 (59%) Query: 13 PQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIA 72 D +L+ A R L + +S A+ +LR+ +A RE+FR+L+LD +NQLIA Sbjct: 99 ALDLQLMFEATRRLMAEPLKRSTVISSWQALLSYLRVTLAHEPREQFRLLFLDKKNQLIA 158 Query: 73 HETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQ 132 E + GT++ +PRE+++RAL +A++VIL HNHPSG+ PSQ D +T+ + + Sbjct: 159 DEIMNYGTVDHAPAYPREIMRRALELSASSVILVHNHPSGDPMPSQGDIDMTKANIAAGK 218 Query: 133 LVDIRVPDHLIVGGRQIYSFAEHGLL 158 + I + DHLIVG + S + G + Sbjct: 219 PLKIAIHDHLIVGREGVLSMKQVGAI 244 >UniRef50_Q0BRK0 DNA repair protein radC n=5 Tax=Alphaproteobacteria RepID=Q0BRK0_GRABC Length = 271 Score = 157 bits (398), Expect = 9e-38, Method: Composition-based stats. Identities = 57/134 (42%), Positives = 81/134 (60%) Query: 25 ALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRT 84 L R + + +L +A + E+FRVL+LDN+NQLIA E L GT+N Sbjct: 138 RLLRADAVAQPVLNNWERLIAYLNASLAREKNEQFRVLFLDNRNQLIADEILAHGTVNHA 197 Query: 85 EVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIV 144 V+PREVVKRAL +A A+I+ HNHPSG+ TPS D +T+ L + +L+ + + DH+I+ Sbjct: 198 PVYPREVVKRALELHATALIVVHNHPSGDPTPSAEDIRMTRELREAGRLLSLDLHDHVII 257 Query: 145 GGRQIYSFAEHGLL 158 G SF + GLL Sbjct: 258 GRHGWSSFRKQGLL 271 >UniRef50_Q2LSS5 DNA repair protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LSS5_SYNAS Length = 308 Score = 157 bits (398), Expect = 1e-37, Method: Composition-based stats. Identities = 55/160 (34%), Positives = 92/160 (57%), Gaps = 2/160 (1%) Query: 1 MKQLSFLPG--EMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREE 58 +++L+ + G R+++ + + T + ++ + + L+ E Sbjct: 147 LEELTAVRGISAHAAGLVRMVKEMSALYLQEKAREKPQISCTGELLDFCKTALGGLKDEN 206 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 F VLYLD QN++IA ET+ G +N+ V+PR+V++RAL ++A+IL HNHPSG PS Sbjct: 207 FCVLYLDTQNRIIAFETIQKGIVNQAVVYPRQVIERALSHKSSALILVHNHPSGFVKPSD 266 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 AD LT+ + +L+DI V DHLI+G + +SF E G++ Sbjct: 267 ADIRLTRTITDTAKLLDIMVHDHLIIGENRFFSFREEGIM 306 >UniRef50_C4SWK5 DNA repair protein n=1 Tax=Yersinia intermedia ATCC 29909 RepID=C4SWK5_YERIN Length = 152 Score = 157 bits (398), Expect = 1e-37, Method: Composition-based stats. Identities = 70/142 (49%), Positives = 98/142 (69%) Query: 17 RLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETL 76 LI + +++ + + G ST AVRE+L+ +A LE E F VL LDNQ++++A+E L Sbjct: 11 DLILQQAQSIIENRYIRGDKMFSTEAVREYLKFKLAPLEHEVFSVLLLDNQHRILAYEEL 70 Query: 77 FTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDI 136 F GT+N ++PRE+VK +L +NA A+IL HNHPSGE PS ADK +T +L VL L+D+ Sbjct: 71 FRGTLNAVSIYPREIVKLSLRYNAGAIILVHNHPSGEPEPSHADKEITNKLKSVLGLLDV 130 Query: 137 RVPDHLIVGGRQIYSFAEHGLL 158 +V DHLIV G Q+ S AE GL+ Sbjct: 131 QVLDHLIVAGTQVVSLAERGLV 152 >UniRef50_C4LDH2 DNA repair protein RadC n=2 Tax=Aeromonadaceae RepID=C4LDH2_TOLAT Length = 165 Score = 157 bits (398), Expect = 1e-37, Method: Composition-based stats. Identities = 67/147 (45%), Positives = 91/147 (61%) Query: 12 TPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLI 71 +P + I R L ++ G + + +L+ M E E F L+LDNQ+++I Sbjct: 19 SPVTEKDILIMARRLAKNRLAKGCSIERPSSAFIYLQALMGNYENEVFGSLFLDNQHRII 78 Query: 72 AHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVL 131 E LF GT+N T +HPREVVKRAL NAAAVI HNHPSGE PS+ADK +T +L + L Sbjct: 79 CFEELFRGTLNVTNIHPREVVKRALAVNAAAVIFVHNHPSGEPEPSEADKKITVQLRETL 138 Query: 132 QLVDIRVPDHLIVGGRQIYSFAEHGLL 158 L+D+RV DH++VG + S AE GL+ Sbjct: 139 NLIDVRVLDHIVVGAKACISMAERGLV 165 >UniRef50_B1I0K4 DNA repair protein radC-like protein n=1 Tax=Lysinibacillus sphaericus C3-41 RepID=B1I0K4_LYSSC Length = 204 Score = 157 bits (398), Expect = 1e-37, Method: Composition-based stats. Identities = 43/146 (29%), Positives = 83/146 (56%) Query: 13 PQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIA 72 R ++ L+ ++ + ++ E++ M L++E F L+LD ++++I Sbjct: 59 ALRIRAVKGLLKIMNSERQGKVKSISNASEAAEYVMDEMKNLKQEHFVCLFLDTRSRVIK 118 Query: 73 HETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQ 132 ET+F G++N + PRE+++ AL ++AA +I HNH SG++ PS D +T+RL + Sbjct: 119 KETIFIGSLNSSIASPREIMRLALKYSAAGIICLHNHCSGDSEPSMQDLEVTRRLFEAGD 178 Query: 133 LVDIRVPDHLIVGGRQIYSFAEHGLL 158 L+ + + DH+++G + S E+ LL Sbjct: 179 LMGVELIDHIVIGNNEFTSIRENNLL 204 >UniRef50_B9Y7M6 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y7M6_9FIRM Length = 228 Score = 157 bits (397), Expect = 1e-37, Method: Composition-based stats. Identities = 58/160 (36%), Positives = 88/160 (55%), Gaps = 2/160 (1%) Query: 1 MKQLSFLPGEMTPQDRRLIQ--RALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREE 58 +K+L + G + ++ R + + A+ WL + ++E Sbjct: 68 LKELMQIKGISQVRGLEILACFELARRISEEQTREIDVVANPDALMAWLGREIGGKQQEH 127 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 F +YLD +N ++ H LF GT++ + VHPREV K AL +A V++ HNHPS + TPS Sbjct: 128 FLAIYLDAKNHILEHRLLFKGTLDASIVHPREVFKEALLASACRVLVVHNHPSQDLTPSL 187 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 AD+ +TQRL + +L+ I + DHLIVG Q +SF HGLL Sbjct: 188 ADRIITQRLKETGELIGIELLDHLIVGTTQYFSFRAHGLL 227 >UniRef50_C2E2B4 DNA repair protein RadC n=8 Tax=Lactobacillus jensenii RepID=C2E2B4_9LACO Length = 207 Score = 157 bits (397), Expect = 1e-37, Method: Composition-based stats. Identities = 50/136 (36%), Positives = 82/136 (60%) Query: 23 LRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTIN 82 L+ L + F S+H V ++L +E+E+ V+YLDN+N+++ LF GT+N Sbjct: 72 LKRLKAVRTRKLIQFVSSHEVGKYLIDRFLGVEQEQLVVIYLDNKNKVLGERLLFQGTVN 131 Query: 83 RTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHL 142 R+ VHPR++ + A+ +N+ +++AHNHPSG+ PSQ D T+++ + L+ I DH+ Sbjct: 132 RSVVHPRDIFRWAVFYNSVGILIAHNHPSGDANPSQKDIEFTKQINKASDLMGINFLDHI 191 Query: 143 IVGGRQIYSFAEHGLL 158 IV R SF E L+ Sbjct: 192 IVADRSYLSFKEEQLI 207 >UniRef50_A5IM26 UPF0758 protein Tpet_1235 n=7 Tax=Thermotogaceae RepID=Y1235_THEP1 Length = 222 Score = 157 bits (397), Expect = 1e-37, Method: Composition-based stats. Identities = 53/150 (35%), Positives = 83/150 (55%), Gaps = 1/150 (0%) Query: 9 GEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQN 68 G + + + L R L S+ V + + M LERE +V+ LD + Sbjct: 74 GMVKAITLKAALELGKRLHRELERIPEKLDSSVKVYRYCQ-EMVYLEREIVKVICLDTKL 132 Query: 69 QLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLV 128 +I TL GT +R+ +HPR+V + A+ NA+ VI+ HNHPSG+ TPS+ D+ +T+RL Sbjct: 133 NVIGENTLTVGTSDRSLIHPRDVFRTAIRANASGVIVVHNHPSGDPTPSKEDRLITERLK 192 Query: 129 QVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 Q +++ + + DH+IV R +SF E G L Sbjct: 193 QAGEILGVSLVDHVIVSRRGYFSFREEGEL 222 >UniRef50_B1JAY7 DNA repair protein RadC n=4 Tax=Pseudomonas RepID=B1JAY7_PSEPW Length = 164 Score = 156 bits (396), Expect = 2e-37, Method: Composition-based stats. Identities = 61/147 (41%), Positives = 93/147 (63%) Query: 12 TPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLI 71 ++ LI AL+ LD+ + G + +L+L +A E F +L LD++++++ Sbjct: 18 RAREDALITGALQLLDQRHFQRGEVLITPADAAAYLKLQLAPYHHEVFALLCLDSRHRVL 77 Query: 72 AHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVL 131 + + LFTG+I+ V+PR+VV +AL NAAAVI +HNHPSG + PS AD+ LT RL + L Sbjct: 78 SFDILFTGSIDGASVYPRQVVIKALERNAAAVIFSHNHPSGCSEPSGADRVLTTRLTEAL 137 Query: 132 QLVDIRVPDHLIVGGRQIYSFAEHGLL 158 LV++RV DH+IVG S AE+G + Sbjct: 138 ALVEVRVLDHIIVGEGTPLSLAEYGWM 164 >UniRef50_C4XRP2 DNA repair protein RadC n=4 Tax=Desulfovibrionales RepID=C4XRP2_DESMR Length = 228 Score = 156 bits (396), Expect = 2e-37, Method: Composition-based stats. Identities = 52/160 (32%), Positives = 81/160 (50%), Gaps = 4/160 (2%) Query: 2 KQLSFLPGEMTPQDRRLIQRALRALDRHLHEP---GVAFTSTHAVREWLRLHMAALEREE 58 ++L +PG + R +P S V E R + E EE Sbjct: 70 EELRGVPG-FGAGAEEFLTLWREVWARFHEQPMRDRAVLGSPDVVAEMARARIGVKEHEE 128 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 F + +D +N+L+ E + GT+++ V+PREV+ AL +NA+ VIL HNHP + PS Sbjct: 129 FWMALVDTKNRLVGWERVSKGTVDQAAVYPREVIAMALRYNASGVILVHNHPGADPKPSA 188 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D T+R+V + +DIRV DHL+V + +SF G++ Sbjct: 189 EDMAFTRRIVAAAREMDIRVLDHLVVTENRFFSFQAEGMI 228 >UniRef50_B2V090 UPF0758 protein CLH_0547 n=18 Tax=Clostridium RepID=Y547_CLOBA Length = 229 Score = 156 bits (396), Expect = 2e-37, Method: Composition-based stats. Identities = 42/147 (28%), Positives = 82/147 (55%) Query: 12 TPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLI 71 Q L + R + + S + + + M+ L++E +V++L+ +N +I Sbjct: 83 ASQILALAELFRRFRTFKSADRDIKIMSPNDIAMLINGEMSLLKQEILKVIFLNTKNIVI 142 Query: 72 AHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVL 131 + +F G++N + VHPRE+ K A++ ++ +I+ HNHPSG+ TPS+ D +T R+ + Sbjct: 143 GTKDVFKGSLNTSIVHPREIFKEAVNKSSTKIIICHNHPSGDPTPSKEDINITLRIKECG 202 Query: 132 QLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +++ I++ DH+I+G S E G + Sbjct: 203 EIMGIQLLDHIIIGKNGFISLKEKGFI 229 >UniRef50_D1U9S4 DNA repair protein RadC n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U9S4_9DELT Length = 227 Score = 156 bits (396), Expect = 2e-37, Method: Composition-based stats. Identities = 56/158 (35%), Positives = 81/158 (51%), Gaps = 2/158 (1%) Query: 3 QLSFLPG--EMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 QL + G L Q + G + V + + EEF Sbjct: 70 QLEAISGIGPAAVAHWALTQELFARMGEARTRSGAPLSDPAEVARAAMARIGSKGVEEFW 129 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 ++D++N++IA E + GT++ T V PRE++ AL AAA+ILAHNHP G+ TPS+ D Sbjct: 130 AAFMDSKNRVIAWEQVSKGTVDATPVFPREIMVTALRLEAAALILAHNHPGGDPTPSRED 189 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 LT+R+ Q + IR+ DH+IV + YSF EHG L Sbjct: 190 LDLTRRIRDTAQGLGIRILDHIIVTDHEYYSFNEHGRL 227 >UniRef50_C6E4Z0 DNA repair protein RadC n=3 Tax=Geobacter RepID=C6E4Z0_GEOSM Length = 167 Score = 156 bits (395), Expect = 2e-37, Method: Composition-based stats. Identities = 53/125 (42%), Positives = 80/125 (64%), Gaps = 2/125 (1%) Query: 32 EPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREV 91 +P +TS V + + +E F L+LD +N+++ + + TG++N++ VHPRE+ Sbjct: 43 KPNTRYTSASQVFDTF-TFLRHETKEHFIALHLDGKNRIVCIDMVSTGSLNQSIVHPREL 101 Query: 92 VKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYS 151 K AL +AAAVIL HNHP+G+ TPS D T+T+RL + +L+ IRV DH+I+G YS Sbjct: 102 FKTALLSSAAAVILLHNHPTGDPTPSTEDLTITRRLQEAGELIGIRVLDHIIIGDN-YYS 160 Query: 152 FAEHG 156 F E G Sbjct: 161 FTERG 165 >UniRef50_A1SR15 UPF0758 protein Ping_0056 n=2 Tax=Gammaproteobacteria RepID=Y056_PSYIN Length = 225 Score = 156 bits (394), Expect = 3e-37, Method: Composition-based stats. Identities = 62/143 (43%), Positives = 89/143 (62%), Gaps = 3/143 (2%) Query: 19 IQRALRALDRHLHEP---GVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHET 75 +Q L R+L EP G A TS + +L M L E F + LD Q+++I Sbjct: 83 LQAVLEMSSRYLQEPLSKGNALTSAAQTKAFLIAKMHNLPYEVFAAILLDTQHRIIRFHE 142 Query: 76 LFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVD 135 F G+I+ VHPR + ++ L NAAA+IL HNHPSG+ + S+ADK +TQ++V LQL+D Sbjct: 143 FFFGSIDCATVHPRIIAQKVLSENAAAIILVHNHPSGDPSASEADKMITQKIVSALQLID 202 Query: 136 IRVPDHLIVGGRQIYSFAEHGLL 158 +RV DHL+VG ++ SFAE+G + Sbjct: 203 VRVLDHLVVGHKKCTSFAENGWI 225 >UniRef50_C4Z083 DNA repair protein RadC n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z083_EUBE2 Length = 230 Score = 156 bits (394), Expect = 3e-37, Method: Composition-based stats. Identities = 42/150 (28%), Positives = 77/150 (51%) Query: 9 GEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQN 68 G+ I R + + + F++ + + M LE+E ++ LDN+ Sbjct: 80 GKAKAVQICCILELSRRIAKQKARERLDFSNAETIAGYYMEDMRHLEKEHLVLVMLDNRC 139 Query: 69 QLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLV 128 +LI + L GT + V RE+ K AL AA+V+L HNHPSG +PS+ D +T+ ++ Sbjct: 140 RLIRDKVLSVGTSTGSMVSVREIFKEALDNRAASVVLLHNHPSGNPSPSREDMKVTRSVM 199 Query: 129 QVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 + +++ I + DH+++G +SF + + Sbjct: 200 EAGKIIGIELLDHIVIGDNSYFSFKQMQYI 229 >UniRef50_C0GE80 DNA repair protein RadC n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GE80_9FIRM Length = 189 Score = 156 bits (394), Expect = 3e-37, Method: Composition-based stats. Identities = 53/160 (33%), Positives = 93/160 (58%), Gaps = 6/160 (3%) Query: 2 KQLSFLPGEMTPQDRRLIQRALRALDRHLHEP---GVAFTSTHAVREWLRLHMAALEREE 58 K+L +PG + P+ + + +A+ L + L EP + S V E + ++A E E Sbjct: 33 KELLRVPG-LGPRKAKQL-KAVFDLSKALLEPDDTSITIQSPADVFENFK-YLALHEEEY 89 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 L+L+ +N+++ H T+ GT+N + +HPREV A+ A+V++ HNHPSG+ TPS+ Sbjct: 90 LVALFLNTKNKILQHTTISKGTLNTSLIHPREVFAPAIRIKCASVVILHNHPSGDPTPSR 149 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D +T+RL + +++ I + DH+++G + S E LL Sbjct: 150 EDIDITKRLKEAGKIIGIELLDHIVIGNKGFVSLREKSLL 189 >UniRef50_A9KL05 DNA repair protein RadC n=7 Tax=Clostridiales RepID=A9KL05_CLOPH Length = 232 Score = 155 bits (393), Expect = 3e-37, Method: Composition-based stats. Identities = 44/150 (29%), Positives = 82/150 (54%) Query: 9 GEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQN 68 G + + + + G+ +T +V E+ M +L+ E+ R+L D ++ Sbjct: 82 GRVKAIQLLCLTELSIRMAKATFADGIRYTDPSSVAEYYMQDMRSLKTEQSRLLMFDTKS 141 Query: 69 QLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLV 128 +L+ E + GT+N + + PREV A+ + A +IL HNHPSG+ TPS+ D +T+R+ Sbjct: 142 KLLREEIISIGTVNASIMSPREVFLLAVKYEAVYIILLHNHPSGDPTPSKEDIAVTKRMK 201 Query: 129 QVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 + +L+ + + DH+I+G + S E G++ Sbjct: 202 EAGELLGVTLMDHIIIGDNRYISLKEQGII 231 >UniRef50_Q3AF80 UPF0758 protein CHY_0341 n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Y341_CARHZ Length = 226 Score = 155 bits (393), Expect = 3e-37, Method: Composition-based stats. Identities = 43/135 (31%), Positives = 71/135 (52%) Query: 24 RALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINR 83 R E + F + V +LR + ++E+ VLYL+ +NQL + G +N Sbjct: 92 RRYYELTGENKLNFLNPDDVYNYLRYKIGHKKQEQVVVLYLNTKNQLCGENIVAIGGVNH 151 Query: 84 TEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLI 143 V P ++ + A+ A AVI+AHNHPSG+ TPS+ D T R+ + +++ I++ DH+I Sbjct: 152 AGVSPGDIFREAVKIGAYAVIIAHNHPSGDPTPSKEDIDFTGRVKKASEILGIKLLDHII 211 Query: 144 VGGRQIYSFAEHGLL 158 +G + S L Sbjct: 212 LGENKYISMKAERLF 226 >UniRef50_B0RXB0 DNA repair protein radC homolog n=3 Tax=Xanthomonas campestris pv. campestris str. B100 RepID=B0RXB0_XANCB Length = 159 Score = 155 bits (393), Expect = 4e-37, Method: Composition-based stats. Identities = 66/140 (47%), Positives = 88/140 (62%), Gaps = 1/140 (0%) Query: 18 LIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLF 77 ++ A L++ L G S +L A L E F V++LDNQ+ ++A E LF Sbjct: 20 ILLAAATILEQRLQRQGR-IHSPDQAGSYLVARCAHLSHEIFGVVFLDNQHHILAAEHLF 78 Query: 78 TGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIR 137 +GTI+ E+HPR V KRAL NAAAVIL HNHPSG PS+AD+ +TQRL + L L+DIR Sbjct: 79 SGTIDGCEIHPRVVAKRALELNAAAVILFHNHPSGNPEPSEADRKVTQRLQEALGLLDIR 138 Query: 138 VPDHLIVGGRQIYSFAEHGL 157 V DHL++GG++ S A G Sbjct: 139 VLDHLVIGGQKSVSLAARGW 158 >UniRef50_B1C9I2 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C9I2_9FIRM Length = 224 Score = 155 bits (392), Expect = 4e-37, Method: Composition-based stats. Identities = 58/159 (36%), Positives = 88/159 (55%), Gaps = 2/159 (1%) Query: 2 KQLSFLPGEMTPQDRRLIQRALRALDRH--LHEPGVAFTSTHAVREWLRLHMAALEREEF 59 ++L MT +I +L R E T + + L M+ L+ E F Sbjct: 66 EELKNDNPGMTDLKCDMILASLEIGRRAYLKKEKQKIITCVMDIVDLLSYDMSFLDEEHF 125 Query: 60 RVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQA 119 +V+ L+ +N +I E + GTIN + VH REV + A+ NA ++ILAHNHPSG++TPS Sbjct: 126 KVILLNTKNMVIETELISIGTINTSLVHVREVFRNAIKKNANSIILAHNHPSGDSTPSIE 185 Query: 120 DKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D+ LT+RL +L+ I+V DH+I+G +SF E +L Sbjct: 186 DEHLTKRLKDAGELIGIKVIDHVIIGKDNYFSFMEENML 224 >UniRef50_B5YL92 DNA repair protein RadC n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YL92_THEYD Length = 222 Score = 154 bits (391), Expect = 6e-37, Method: Composition-based stats. Identities = 50/145 (34%), Positives = 79/145 (54%), Gaps = 1/145 (0%) Query: 14 QDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAH 73 I A+ R L + G+ + V + + + ++E F L LD + LI Sbjct: 76 AKACQIMAAIEFSKRFLLKEGIKIKNVDDVLK-ITEELKDKKQEYFLSLTLDGASNLIQK 134 Query: 74 ETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQL 133 T+F GT+N + VHPRE+ A+ AA +I HNHPSG++ PS+ D +T+RLV++ ++ Sbjct: 135 RTVFIGTLNHSIVHPREIFADAISDRAAGIIFVHNHPSGDSEPSKQDIEITKRLVEIGKM 194 Query: 134 VDIRVPDHLIVGGRQIYSFAEHGLL 158 + I V DH+I+ YSF G+L Sbjct: 195 LGIEVIDHIIISKNGYYSFQAEGML 219 >UniRef50_Q5DY97 DNA repair protein RadC n=17 Tax=Proteobacteria RepID=Q5DY97_VIBF1 Length = 165 Score = 154 bits (391), Expect = 7e-37, Method: Composition-based stats. Identities = 58/148 (39%), Positives = 85/148 (57%), Gaps = 1/148 (0%) Query: 11 MTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQL 70 T ++ ++ A ++ + A TS E + ERE F +L LDNQ++L Sbjct: 19 FTENEKMILAEAASIIEVKIRNTS-ALTSPDLAAELCVNRLVHQEREVFAILMLDNQHRL 77 Query: 71 IAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQV 130 I G+I+ V+PREV+K LH+NAAAVI AHNHPSG PS AD+ +T RL Sbjct: 78 IKFVEHSVGSISSASVYPREVLKSVLHYNAAAVIFAHNHPSGVAEPSDADRRITARLSSA 137 Query: 131 LQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 L+L+D++V DH ++G + SFA+ G + Sbjct: 138 LELIDVKVLDHFVIGVGETVSFAKRGWI 165 >UniRef50_C6BYC2 DNA repair protein RadC n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BYC2_DESAD Length = 225 Score = 154 bits (391), Expect = 7e-37, Method: Composition-based stats. Identities = 49/134 (36%), Positives = 75/134 (55%) Query: 25 ALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRT 84 + A +S V + + L +EEF + ++N+N++I E L GT+++T Sbjct: 92 RIAEEPMNGKEAISSPDVVYKAAMARIGNLSKEEFWIALVNNRNKVICWERLSEGTVDKT 151 Query: 85 EVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIV 144 V+PREVV AL NA+ VIL HNHP G+ +PS D T + + Q ++IR+ DH+IV Sbjct: 152 AVYPREVVALALRHNASGVILTHNHPGGDPSPSPEDTERTMEIAALCQDMEIRLLDHVIV 211 Query: 145 GGRQIYSFAEHGLL 158 + +SF E G L Sbjct: 212 TADRFHSFKEAGYL 225 >UniRef50_Q2S042 UPF0758 protein SRU_2338 n=1 Tax=Salinibacter ruber DSM 13855 RepID=Y2338_SALRD Length = 233 Score = 154 bits (390), Expect = 7e-37, Method: Composition-based stats. Identities = 50/161 (31%), Positives = 83/161 (51%), Gaps = 5/161 (3%) Query: 2 KQLSFLPGEMTPQDRRLIQRALRALDR----HLHEPGVAFTSTHAVREWLRLHMAALERE 57 K+L+ G + P + A A R + + T V + + L++E Sbjct: 73 KELTRTRG-VGPAKATKLAAAFEAGRRVESQRQQDERMQVTCPADVADVYGPLLRDLDKE 131 Query: 58 EFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPS 117 F+V++L+ N +I T+ G ++ + V PR V ++A+ +AAAVI HNHPSG PS Sbjct: 132 VFKVVHLNTANVIIGDYTVSEGGLSSSVVEPRGVFEQAILDDAAAVICLHNHPSGNPEPS 191 Query: 118 QADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 + D +T++L + + I V DHLI+ G + S AE G++ Sbjct: 192 REDIRITRQLAEAGGTMGIPVHDHLIIAGTKHTSLAERGVI 232 >UniRef50_UPI0001BC32AB DNA repair protein RadC n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC32AB Length = 227 Score = 154 bits (390), Expect = 8e-37, Method: Composition-based stats. Identities = 43/134 (32%), Positives = 71/134 (52%) Query: 25 ALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRT 84 + + F ++ ++ + LE E F VL L+ + +LI + L GT+N T Sbjct: 94 RISKATMAKRTVFNTSKDAADYCMEELRHLEYECFMVLLLNTKCELINEKILSMGTVNYT 153 Query: 85 EVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIV 144 + REV + AL A +I+ HNHPSG+ TPS+ D T++L + +LV I + DH+I+ Sbjct: 154 CITSREVYRYALSKGAVYIIVVHNHPSGDPTPSREDSLCTKKLKEAGELVGIPLIDHIII 213 Query: 145 GGRQIYSFAEHGLL 158 G + S E ++ Sbjct: 214 GDNRYISLKEQDMI 227 >UniRef50_Q1WT78 DNA repair protein n=3 Tax=Lactobacillus RepID=Q1WT78_LACS1 Length = 225 Score = 154 bits (390), Expect = 9e-37, Method: Composition-based stats. Identities = 50/167 (29%), Positives = 90/167 (53%), Gaps = 9/167 (5%) Query: 1 MKQLSFLPGE----MTPQDRR--LIQRALRALDRHLHEPGVAFT---STHAVREWLRLHM 51 + +L F E + D + +I+ +R+ + G+ S+ ++ + Sbjct: 57 LNELQFFSDEGLKNLCKDDEKVAIIRALREFSERYKEKEGLVLGQIFSSCMFGNYMIDKI 116 Query: 52 AALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPS 111 ++E + LD +NQ+++ + +F GT+N VHPRE+ K AL+F+ A +++AHNHPS Sbjct: 117 GDSKQELLVCVCLDTKNQVLSEKVIFKGTLNSATVHPREIFKHALNFSCARILVAHNHPS 176 Query: 112 GETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 G PS+ D LT+RL+ +++ I + DH+IVG S AE ++ Sbjct: 177 GNVEPSENDIQLTKRLINAGKMIGIELIDHVIVGSEVYLSLAEEKIV 223 >UniRef50_Q02HM7 Putative uncharacterized protein n=1 Tax=Pseudomonas aeruginosa UCBPP-PA14 RepID=Q02HM7_PSEAB Length = 202 Score = 154 bits (390), Expect = 9e-37, Method: Composition-based stats. Identities = 59/144 (40%), Positives = 84/144 (58%), Gaps = 5/144 (3%) Query: 15 DRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHE 74 + +L+QRA+ L+R + G S +R++LRL + E F ++LD Q Sbjct: 64 EDQLVQRAIAVLERRMFRRGQELLSPRGLRQYLRLRLVGKSEEVFAAVFLDAQ-----WR 118 Query: 75 TLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLV 134 LF GT+N ++ R VVKRAL NA V++AHNHPSG TPSQAD T++L L LV Sbjct: 119 ALFRGTVNAAPMYARVVVKRALRHNAVGVVVAHNHPSGLATPSQADIAATRQLKAALNLV 178 Query: 135 DIRVPDHLIVGGRQIYSFAEHGLL 158 DI + DH ++G + +SF + LL Sbjct: 179 DIELLDHFVIGRGEPFSFFDAQLL 202 >UniRef50_A9I305 DNA repair protein radC homolog n=3 Tax=Proteobacteria RepID=A9I305_BORPD Length = 177 Score = 154 bits (390), Expect = 9e-37, Method: Composition-based stats. Identities = 54/149 (36%), Positives = 83/149 (55%) Query: 8 PGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQ 67 G + A R L + +AV+ + + ++ + E VLYL++Q Sbjct: 27 SGRYQAATDSHVLAAARVAAESLIGDRADMGNPNAVKHYFQAKLSGMGHEVAAVLYLNSQ 86 Query: 68 NQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRL 127 ++I + + GT+ + V+PRE+VK AL +AAA+I++HNHPSG PS+AD LT+ L Sbjct: 87 FKVIRYMEMSHGTLTQASVYPREIVKTALRLDAAAIIMSHNHPSGIPEPSEADLALTRHL 146 Query: 128 VQVLQLVDIRVPDHLIVGGRQIYSFAEHG 156 L LVD+R+ DH+IV G+ S AE G Sbjct: 147 KHALALVDVRLVDHIIVTGQNTTSLAERG 175 >UniRef50_A9IU27 UPF0758 protein Bpet3149 n=5 Tax=Bordetella RepID=Y3149_BORPD Length = 225 Score = 154 bits (390), Expect = 1e-36, Method: Composition-based stats. Identities = 67/160 (41%), Positives = 92/160 (57%), Gaps = 4/160 (2%) Query: 2 KQLSFLPGEMTPQD---RRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREE 58 ++L LPG + +++ A RA + L A + +V+ + + +A E Sbjct: 67 QELMSLPGLGAAKAGTLAAILELARRAAEERLMRQ-QAMSEPGSVKRYFKTALANCAVEH 125 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 LYLD+Q LI L GT+ R V+PREVV+ AL +AAA+ILAHNHPSG PSQ Sbjct: 126 CLALYLDSQLNLITSGELARGTLARASVYPREVVREALRHHAAALILAHNHPSGSAQPSQ 185 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 AD+ T+ + Q L LV+IR+ DHLIV G + S AE GLL Sbjct: 186 ADRDFTRHMQQALALVEIRLLDHLIVAGDTVVSMAELGLL 225 >UniRef50_A1K759 DNA repair protein n=2 Tax=Rhodocyclaceae RepID=A1K759_AZOSB Length = 196 Score = 153 bits (388), Expect = 2e-36, Method: Composition-based stats. Identities = 63/140 (45%), Positives = 81/140 (57%), Gaps = 3/140 (2%) Query: 22 ALRALDRHLHEP---GVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFT 78 A+ L R E S VR++LR E F VLYLD QN+LI E F Sbjct: 57 AIEILHRSFAEQLSARNVLDSPGVVRQFLRTFFEGKPYEIFVVLYLDAQNRLIRAEEAFR 116 Query: 79 GTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRV 138 GT+ +T V+PRE+++R+L +AA VI +H HPSG PS AD+ LT L L LVD+RV Sbjct: 117 GTLTQTSVYPREILRRSLELHAAGVIFSHQHPSGVCEPSSADEVLTNMLKSALTLVDVRV 176 Query: 139 PDHLIVGGRQIYSFAEHGLL 158 DH++V G + SFAE G L Sbjct: 177 LDHIVVAGDRAVSFAETGRL 196 >UniRef50_C7GE95 DNA repair protein RadC n=2 Tax=Roseburia RepID=C7GE95_9FIRM Length = 243 Score = 153 bits (387), Expect = 2e-36, Method: Composition-based stats. Identities = 45/150 (30%), Positives = 77/150 (51%) Query: 9 GEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQN 68 G + + I + + + P V T+ + ++ H+ +E V DN+ Sbjct: 92 GPIKAIQLKCIAELSKRIAQTKSAPNVCMTNPRTIADYYMEHLRHENKEHLIVCMFDNKC 151 Query: 69 QLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLV 128 + + L G+ N T V PREV + A++ +AA +IL HNHPSG PS AD +T+R++ Sbjct: 152 HMKGDKLLSVGSANETIVSPREVFETAINCHAAHLILVHNHPSGIPEPSHADDVVTKRIL 211 Query: 129 QVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 QL+ I + DH+I+G +S+ E+ + Sbjct: 212 NCGQLMGIPLSDHVIIGDHSYFSYRENNRI 241 >UniRef50_Q042N7 DNA repair protein n=7 Tax=Lactobacillus RepID=Q042N7_LACGA Length = 206 Score = 153 bits (387), Expect = 2e-36, Method: Composition-based stats. Identities = 47/141 (33%), Positives = 79/141 (56%) Query: 18 LIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLF 77 ++Q L + ++ + S+ V ++ + +EE +YLD++N++IA + +F Sbjct: 66 VLQLMLERVKGVNNKEIESLYSSSQVGCYIADKLCGRPQEELYGIYLDSKNKIIAEKLIF 125 Query: 78 TGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIR 137 GT+NR HPR++ + A+ +N+ A +AHNHPSG+ PSQ D T++LV+ + + I Sbjct: 126 QGTVNRAVAHPRDIFRWAVIYNSTAFFVAHNHPSGDEQPSQHDLRFTKKLVEASKCMGID 185 Query: 138 VPDHLIVGGRQIYSFAEHGLL 158 DH IV SF E LL Sbjct: 186 FLDHFIVTDNTYLSFREMELL 206 >UniRef50_Q0AWG3 UPF0758 protein Swol_1642 n=12 Tax=Firmicutes RepID=Y1642_SYNWW Length = 235 Score = 153 bits (387), Expect = 2e-36, Method: Composition-based stats. Identities = 54/133 (40%), Positives = 78/133 (58%), Gaps = 3/133 (2%) Query: 26 LDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTE 85 L R + P AVRE M +RE FRVLYLD + LI + + G ++ + Sbjct: 106 LRRIIKSPEDV---QEAVRELAMEEMRHYDREHFRVLYLDRKGGLITMQDISIGGLHSSI 162 Query: 86 VHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVG 145 VHPREV K A+ +AA++IL HNHPSG+ TPSQ D +T+RL++ +++ I + DH+I+G Sbjct: 163 VHPREVFKTAVKKSAASMILVHNHPSGDPTPSQEDIEITRRLIEAGKIMGIEILDHVIIG 222 Query: 146 GRQIYSFAEHGLL 158 S GL+ Sbjct: 223 EINYCSLKARGLI 235 >UniRef50_Q8VR59 Putative intergenic-region protein n=24 Tax=Escherichia RepID=Q8VR59_ECOLX Length = 260 Score = 153 bits (387), Expect = 2e-36, Method: Composition-based stats. Identities = 93/155 (60%), Positives = 118/155 (76%), Gaps = 3/155 (1%) Query: 7 LPGEMTPQDRRLIQR-ALRALDRHLHE-PGVAFTSTHAVREW-LRLHMAALEREEFRVLY 63 + G + P + Q+ RA++ + + P + + H++ E + + A R EFRVLY Sbjct: 106 INGNLIPTSQMCNQQTGFRAVEVEVGQAPEMVKKAVHSIAERDVSVLQAFGVRMEFRVLY 165 Query: 64 LDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTL 123 L+NQN+LIA ETLFTGTINRTEVHPREV+KRAL+ NAAAV+LAHNHPSGE TPS+AD+ + Sbjct: 166 LNNQNKLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLI 225 Query: 124 TQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 T+RLVQ L LVDIRVPDHLIVGG Q++SFAEHGLL Sbjct: 226 TERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 260 >UniRef50_B7ANR2 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7ANR2_9BACE Length = 246 Score = 152 bits (386), Expect = 2e-36, Method: Composition-based stats. Identities = 41/150 (27%), Positives = 75/150 (50%) Query: 9 GEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQN 68 G + + R + + + F + ++ ++ + E E ++ LD + Sbjct: 93 GSVKALQIMAVIELSRRISKSCAYRRLDFRNPVSIADYYMEDLRHAECERLVLVMLDTKL 152 Query: 69 QLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLV 128 +LI E + TGT+N + V PRE+ AL A +++ HNHPSG+ PS D +T+R+ Sbjct: 153 RLIKDEIISTGTVNASIVSPREIFVAALRAGAVFIVMLHNHPSGDAEPSSNDIAITRRVQ 212 Query: 129 QVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +++ I + DH+I+G + S E GL+ Sbjct: 213 LAGEMLGISLIDHIIIGDNRFVSLKESGLM 242 >UniRef50_A9HJN5 DNA repair protein RadC n=1 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=A9HJN5_GLUDA Length = 221 Score = 152 bits (386), Expect = 3e-36, Method: Composition-based stats. Identities = 57/141 (40%), Positives = 84/141 (59%) Query: 18 LIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLF 77 L++ A L R G + A+ +L+ +A E+FRVL+LD +LIA E L Sbjct: 81 LLREAAIRLMRARIRQGDLLSCHDALMAYLQASLARDTVEQFRVLFLDRGTRLIADEVLA 140 Query: 78 TGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIR 137 GTI++T V+PREV++RA+ A+ +IL HNHP TPS+ D +T+RL Q+ ++ + Sbjct: 141 QGTIDQTPVYPREVMRRAIQLKASELILVHNHPGWNPTPSREDIAMTRRLAQIATVLGLT 200 Query: 138 VPDHLIVGGRQIYSFAEHGLL 158 V DH+IVG SF + GLL Sbjct: 201 VRDHVIVGNGASISFRQAGLL 221 >UniRef50_Q38XC8 UPF0758 protein LCA_0852 n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=Y852_LACSS Length = 224 Score = 152 bits (385), Expect = 3e-36, Method: Composition-based stats. Identities = 54/158 (34%), Positives = 83/158 (52%), Gaps = 1/158 (0%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 ++Q+ + G + + + I R + S+ V + + +A +E+ Sbjct: 66 LRQIEGI-GPVKAIELQAICELSRRIQNQRTLRFGVVASSQMVGQRMIESLAGETQEQLL 124 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 +YLD +NQ+I + L+ GT+N + HPREV K A+ ++AA IL HNHPSG+ PS D Sbjct: 125 AVYLDVKNQIIQIKQLYLGTLNSSVAHPREVFKWAVQYSAAKFILVHNHPSGQLAPSTQD 184 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 T+R+V QL+ I DHLI+G Q S E G L Sbjct: 185 INFTKRIVNCGQLMGITCLDHLIIGSSQYLSLREEGYL 222 >UniRef50_C2KVW9 Possible DNA repair protein RadC n=1 Tax=Oribacterium sinus F0268 RepID=C2KVW9_9FIRM Length = 229 Score = 152 bits (385), Expect = 3e-36, Method: Composition-based stats. Identities = 49/151 (32%), Positives = 81/151 (53%), Gaps = 1/151 (0%) Query: 9 GEMTPQDRRLI-QRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQ 67 GE + ++I + A R +R + E +F S +V ++ + + L EE VL+LD + Sbjct: 79 GETKALELQVIGELAKRIWNRKIREEVQSFRSPGSVLQYFKEELRHLSYEEVHVLFLDTK 138 Query: 68 NQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRL 127 QL+ L G+ N + + RE+ AL + IL HNHPSG+ PS+ D+ T+ + Sbjct: 139 AQLLKDFLLSKGSSNASILSGREIFMEALRAASVCFILVHNHPSGDPHPSREDERATEEI 198 Query: 128 VQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 + + + I + DH+I+G Q YSF E G + Sbjct: 199 YKAGEYLGIHLMDHIIIGDNQYYSFKEQGKI 229 >UniRef50_B7C9V0 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9V0_9FIRM Length = 224 Score = 152 bits (385), Expect = 3e-36, Method: Composition-based stats. Identities = 58/161 (36%), Positives = 89/161 (55%), Gaps = 5/161 (3%) Query: 1 MKQLSFLPGEMTPQDRRL---IQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALERE 57 + L + G + +L ++ + R + ++ V EW + + +E Sbjct: 65 VNTLMQIQGIREVKALQLLASVELSKRVIKSKVY--HAPILKPEDVIEWFKFEYGTMSQE 122 Query: 58 EFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPS 117 F LYLD +++LI+H LF GT+N + VHPREV K A NA +V++AHNHPSG+ TPS Sbjct: 123 CFIALYLDTKSKLISHRVLFKGTLNESVVHPREVFKEAFLQNANSVLIAHNHPSGDCTPS 182 Query: 118 QADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +AD +T ++V V + + + DH+IV Q YSF EH L Sbjct: 183 KADFEVTYKMVHVAMTMGVCLVDHIIVCKNQYYSFKEHKYL 223 >UniRef50_Q2B8H5 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B8H5_9BACI Length = 228 Score = 152 bits (385), Expect = 3e-36, Method: Composition-based stats. Identities = 46/135 (34%), Positives = 79/135 (58%), Gaps = 1/135 (0%) Query: 24 RALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINR 83 + ++ S ++ ++ ++E F VL LD ++QLI+ + ++ GTI+ Sbjct: 95 KKINSMFMPEVECLRSPEDAYHAVK-YLTNEDQETFVVLALDTKHQLISRKEIYKGTIDA 153 Query: 84 TEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLI 143 VHPREV + AL+ +AA +I+AH HPSG +PS+ D +T+RL +V + + I + DH+I Sbjct: 154 AIVHPREVFRFALNKSAAHIIVAHQHPSGNCSPSRDDIEVTKRLRKVGEEIGIPLSDHII 213 Query: 144 VGGRQIYSFAEHGLL 158 VG + +S + G L Sbjct: 214 VGRNKYFSMKKQGHL 228 >UniRef50_Q1DAY3 DNA repair protein RadC n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1DAY3_MYXXD Length = 241 Score = 152 bits (385), Expect = 3e-36, Method: Composition-based stats. Identities = 47/120 (39%), Positives = 68/120 (56%) Query: 39 STHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHF 98 + + +L + AL RE F VL + +N L+ + GT+N V PREV AL Sbjct: 104 TPKEIAAYLAPVLGALRREVFHVLCFNARNVLVHDARVAEGTMNTCPVDPREVFAAALTS 163 Query: 99 NAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 A +++LAHNHPSG+ PS D LT+ LV QL++I+V DH+++G S E GL+ Sbjct: 164 RATSIVLAHNHPSGDPEPSVQDLGLTRHLVAGAQLLNIKVLDHVVMGDGGYVSMLERGLM 223 >UniRef50_D2BJ47 DNA repair protein n=5 Tax=Dehalococcoides RepID=D2BJ47_DEHSV Length = 275 Score = 152 bits (384), Expect = 4e-36, Method: Composition-based stats. Identities = 55/150 (36%), Positives = 86/150 (57%) Query: 9 GEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQN 68 GE+ LI+ R + + V ++L M L++E F+V+YLD+Q+ Sbjct: 93 GEVNSMALTLIREVSRRYLKDGIMEKPVCNTAQQVFDYLYCAMRGLKKEVFKVIYLDSQH 152 Query: 69 QLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLV 128 +++ LFTGT+ + PREV+ A+ NA+A+I HNHPSG+ PSQADK +T+ LV Sbjct: 153 RVLELADLFTGTVASGSIVPREVIAAAISQNASALIFVHNHPSGKIEPSQADKDVTRELV 212 Query: 129 QVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 ++ IR DH+I+G +SFA G++ Sbjct: 213 YAAMVMKIRALDHIIIGDNCYFSFAAAGIM 242 >UniRef50_UPI0000E0FF1E DNA repair protein RadC n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0FF1E Length = 213 Score = 152 bits (384), Expect = 4e-36, Method: Composition-based stats. Identities = 56/127 (44%), Positives = 79/127 (62%) Query: 32 EPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREV 91 E + S + + + +E F V L+NQ++ + ++ LF+GTIN V+PRE+ Sbjct: 86 ERMMKLDSVDESKAFFISQLQYYPQERFAVALLNNQHEFLHYKELFSGTINAASVYPREI 145 Query: 92 VKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYS 151 VK AL +NAA VILAHNHPSG PSQAD +TQR+ Q L L+D++V DH++VG S Sbjct: 146 VKYALDYNAANVILAHNHPSGTPEPSQADIAITQRIRQALDLIDVQVLDHIVVGAGNAVS 205 Query: 152 FAEHGLL 158 A+ G L Sbjct: 206 LAQRGCL 212 >UniRef50_C9LLN8 DNA repair protein RadC n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLN8_9FIRM Length = 227 Score = 151 bits (383), Expect = 5e-36, Method: Composition-based stats. Identities = 42/140 (30%), Positives = 75/140 (53%) Query: 19 IQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFT 78 ++ R H + F+ AV + + ++E F V +L+ +N+L+ ++ + Sbjct: 88 VELGRRLAQFHNKKQLENFSFPEAVASYFMEKLRHEDQEHFIVCFLNTKNRLLGYKEICV 147 Query: 79 GTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRV 138 G+++ V +E ++ AL F A +IL HNHPSG PS AD LT++ + DIR+ Sbjct: 148 GSLDAAPVDIKEAMRWALRFKAHGMILVHNHPSGYPEPSDADINLTRQFRRATSFFDIRL 207 Query: 139 PDHLIVGGRQIYSFAEHGLL 158 DH+I+G + S ++GL+ Sbjct: 208 LDHVIIGDGEFASLNKNGLV 227 >UniRef50_B2A699 DNA repair protein RadC n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A699_NATTJ Length = 241 Score = 151 bits (383), Expect = 6e-36, Method: Composition-based stats. Identities = 53/161 (32%), Positives = 83/161 (51%), Gaps = 5/161 (3%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPG---VAFTSTHAVREWLRLHMAALERE 57 + +L +PG + ++ A +R + TS + + + RE Sbjct: 82 ISELCEIPG-IGYAKSIKLKAAFELANRCMAREQLTMDKITSPEDIFRLMNFRLKTETRE 140 Query: 58 EFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPS 117 F + L+ ++ L+ + + G++N T VHPREV RA+ +A VIL HNHPSG+ PS Sbjct: 141 HFLAVMLNTKSYLLKIDLISIGSLNATIVHPREVFNRAIRASACGVILVHNHPSGDPEPS 200 Query: 118 QADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSF-AEHGL 157 Q D LT RLV L+ I + DH+I+G ++ YSF E+ L Sbjct: 201 QDDIKLTNRLVAAGDLLGIPIMDHVIIGHQKFYSFSRENHL 241 >UniRef50_A9IEU5 Putative DNA repair protein n=1 Tax=Bordetella petrii DSM 12804 RepID=A9IEU5_BORPD Length = 174 Score = 151 bits (382), Expect = 6e-36, Method: Composition-based stats. Identities = 60/152 (39%), Positives = 86/152 (56%) Query: 7 LPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDN 66 G M P R I R L G ++ + +L+L +A LE E ++ LD Sbjct: 23 ADGAMRPAQRAEILAVARELVSIDTLHGEDLSNPDKAKAFLQLRLAGLEHEVCALMLLDV 82 Query: 67 QNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQR 126 Q +LI + F GT+++ V+PRE++K AL NAA +++AHNHPSG SQAD+ LTQ Sbjct: 83 QLRLITYLEPFRGTLSQAPVYPREILKLALRHNAAGLMMAHNHPSGLAEASQADRQLTQA 142 Query: 127 LVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 + Q L L+D+R+ DH IV G + S A+ G L Sbjct: 143 VQQALALIDVRLLDHFIVAGTTVVSMAQRGQL 174 >UniRef50_C8PDJ9 DNA repair protein RadC n=1 Tax=Lactobacillus iners DSM 13335 RepID=C8PDJ9_9LACO Length = 205 Score = 151 bits (382), Expect = 6e-36, Method: Composition-based stats. Identities = 48/143 (33%), Positives = 82/143 (57%), Gaps = 3/143 (2%) Query: 16 RRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHET 75 L+ ++A+ R E +F S+ + +L ++ +E +Y+D +N++IA + Sbjct: 66 AELLLNRVKAIKREKME---SFCSSSQIGYYLSNVLSGCYQEHLMAVYVDVKNKIIAEKV 122 Query: 76 LFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVD 135 +F GT+N+ +HPR++ + A+ +NAA LAHNHPS + TPS+ D +T+++ V + + Sbjct: 123 IFKGTLNQAIIHPRDIFRWAIIYNAAGFFLAHNHPSEDLTPSEQDIQVTKKISSVSECMG 182 Query: 136 IRVPDHLIVGGRQIYSFAEHGLL 158 IR DH IV SF E LL Sbjct: 183 IRFLDHFIVNTGNYLSFKEMELL 205 >UniRef50_A0Z2T6 DNA repair protein RadC n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z2T6_9GAMM Length = 223 Score = 151 bits (382), Expect = 7e-36, Method: Composition-based stats. Identities = 60/154 (38%), Positives = 82/154 (53%), Gaps = 1/154 (0%) Query: 4 LSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLY 63 L+ + + Q + A R + L E + ++L+ H RE F L+ Sbjct: 67 LTGVGRQRRYQLSCALLLATRLAEEELFERSP-LKDPGSCYKYLQHHYLLQSREVFTCLF 125 Query: 64 LDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTL 123 LD Q QL+A +F GT+N V+PRE+V AL A+A+I+AHNHPSG PS AD L Sbjct: 126 LDTQRQLLACRDMFFGTLNTAPVYPREIVAMALKMGASAIIVAHNHPSGCLAPSVADIQL 185 Query: 124 TQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGL 157 T RL + L L+DI + DHLIV + S A GL Sbjct: 186 TDRLRRALGLIDIDLLDHLIVAQGRYLSMASEGL 219 >UniRef50_Q6TFX1 ORF25 n=3 Tax=Enterobacteriaceae RepID=Q6TFX1_ERWAM Length = 149 Score = 151 bits (382), Expect = 7e-36, Method: Composition-based stats. Identities = 76/149 (51%), Positives = 99/149 (66%), Gaps = 1/149 (0%) Query: 10 EMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQ 69 + + ++ +I++A + + T A R LR +AA RE F +L+ N Sbjct: 2 KFSAEELNIIRQADAIIAGKITTT-DFITGADAARSLLRFRLAAEPRESFCAFFLNCHNG 60 Query: 70 LIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQ 129 +IA E LF GTI+ VHPR V++RALH NAAAV+LAHNHPS TTPSQADK +T+RL Q Sbjct: 61 VIAFEELFKGTISSVTVHPRIVLQRALHHNAAAVVLAHNHPSANTTPSQADKLITERLAQ 120 Query: 130 VLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 VL +VD++V DHLIVGG IYSFAEHGL+ Sbjct: 121 VLGMVDVKVLDHLIVGGSDIYSFAEHGLI 149 >UniRef50_A7HJG0 DNA repair protein RadC n=3 Tax=Thermotogaceae RepID=A7HJG0_FERNB Length = 225 Score = 151 bits (382), Expect = 7e-36, Method: Composition-based stats. Identities = 46/142 (32%), Positives = 81/142 (57%), Gaps = 6/142 (4%) Query: 18 LIQRALRALDRHLHEPGV----AFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAH 73 + AL R + E V TS V ++ + M + +E RV++LD + ++I Sbjct: 77 TLMAALELAKRLVKEETVILDPKLTSPENVFQYC-IDMQSYPQEIVRVIFLDTKLKVIGS 135 Query: 74 ETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQL 133 + + GTIN + HPR++ + A+ ++ +ILAHNHPSG+ TPS+ D LT+++ + +L Sbjct: 136 KDVSKGTINSSMAHPRDIFREAILRSSTGIILAHNHPSGDPTPSKDDIELTKKIKKAGEL 195 Query: 134 VDIRVPDHLIVGGRQIYSFAEH 155 + I + DH+I+G + YS + Sbjct: 196 LGINLHDHVIIG-QTFYSLRQK 216 >UniRef50_A6Q5Q5 DNA repair protein RadC n=2 Tax=unclassified Epsilonproteobacteria RepID=A6Q5Q5_NITSB Length = 220 Score = 151 bits (382), Expect = 8e-36, Method: Composition-based stats. Identities = 49/149 (32%), Positives = 77/149 (51%), Gaps = 1/149 (0%) Query: 10 EMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQ 69 E+ I A+ R+L + S + V E L+ + ++E F YLD N+ Sbjct: 73 ELGIAKAAQIVSAVELSKRYLFKQHKTVISANDVYEELKEYF-DKKQEYFIAFYLDGANR 131 Query: 70 LIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQ 129 + + GT+N++ VHPREV A+ A++I+AHNHPS TPS+ D +TQ+L Q Sbjct: 132 ICEKRVITIGTLNQSLVHPREVFAPAIESRCASIIVAHNHPSNNLTPSREDILVTQKLKQ 191 Query: 130 VLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +++ I + DH+I S E G+L Sbjct: 192 SGKILGIELLDHIIFSKEGFVSLQEEGIL 220 >UniRef50_D2RM81 DNA repair protein RadC n=2 Tax=Acidaminococcus RepID=D2RM81_ACIFE Length = 220 Score = 151 bits (381), Expect = 9e-36, Method: Composition-based stats. Identities = 54/161 (33%), Positives = 85/161 (52%), Gaps = 4/161 (2%) Query: 1 MKQLSFLPGEMTPQDRRLIQRAL---RALDRHLHEPGVAFTSTHAVREWLRLHMAALERE 57 +++L+ + G + P +I AL R L P + + E Sbjct: 61 VRELTRISG-IGPAKATVILAALELGRRLAGAGTRPFRTIHCPEDGAMLVMPRLRYENHE 119 Query: 58 EFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPS 117 F V+ L+++ ++I E + G++N + VHPRE AL +AAA++ HNHPSG+ TPS Sbjct: 120 HFLVVLLNSKGKVIGIEPVSEGSLNASVVHPREAFAPALLHHAAAILAVHNHPSGDPTPS 179 Query: 118 QADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 + D+ LT+ L +++ I + DHLI+G YSF EHGLL Sbjct: 180 REDRELTRTLWDTGKVMGIPLVDHLIIGDGVYYSFKEHGLL 220 >UniRef50_B4CZF8 DNA repair protein RadC n=2 Tax=Verrucomicrobia RepID=B4CZF8_9BACT Length = 231 Score = 151 bits (381), Expect = 9e-36, Method: Composition-based stats. Identities = 63/165 (38%), Positives = 90/165 (54%), Gaps = 8/165 (4%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEP--GVAFTSTHAVREWLRLHMAALEREE 58 +K+LS + G + P + A R E S + + L M AL RE Sbjct: 68 VKELSKIKG-VGPAKAVQLVAAFGLASRLARETLARQRLDSPELINDLLGPEMRALGRES 126 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 R++ LD + LI E + G++N + HPREV + AL ++A AVIL HNHPSG+ TPS Sbjct: 127 LRLVLLDTKYLLIRVEEISHGSLNESIAHPREVFRPALIYSAYAVILVHNHPSGDPTPSS 186 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQ-----IYSFAEHGLL 158 AD LT+RLVQ +L+ IR+ DH+I+G +SF E G++ Sbjct: 187 ADHQLTRRLVQGAELLQIRLLDHVILGTGDNGRLPYFSFKEAGII 231 >UniRef50_Q3A6E7 DNA repair protein, RadC-like n=3 Tax=Desulfuromonadales RepID=Q3A6E7_PELCD Length = 166 Score = 151 bits (381), Expect = 1e-35, Method: Composition-based stats. Identities = 61/161 (37%), Positives = 91/161 (56%), Gaps = 5/161 (3%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPG---VAFTSTHAVREWLRLHMAALERE 57 + + L P ++I+ L G AFTS V E L + A +E Sbjct: 8 LSEPLSLIRRKLPLRLKVIRPVFETLKVKELPAGYLDEAFTSPRKVAEMLAF-LKAESKE 66 Query: 58 EFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPS 117 F L+LDN+N+L+ + + G+++ + VHPREV K AL +AA ++L HNHPSG+T PS Sbjct: 67 YFMALHLDNKNRLLCLDRVSVGSLSASIVHPREVFKSALLSSAAGLVLVHNHPSGQTEPS 126 Query: 118 QADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D+ +T RLV+ +++ I V DH+I+G +SFAE GLL Sbjct: 127 HEDEEVTTRLVKAGEMLGIHVLDHIILGD-GFFSFAEQGLL 166 >UniRef50_D1AWS8 DNA repair protein RadC n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AWS8_STRM9 Length = 211 Score = 151 bits (381), Expect = 1e-35, Method: Composition-based stats. Identities = 49/126 (38%), Positives = 82/126 (65%) Query: 33 PGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVV 92 + + ++L+ +ERE F+VLY + +N LI E +F GTI+++ V+ RE+V Sbjct: 86 EEKKISCFEDLVKYLKFQYVDMEREVFKVLYFNTKNVLIKDENIFYGTIDKSVVYVREIV 145 Query: 93 KRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSF 152 K L +NA ++I+ HNHPSG PS D+ LT++++ VL+L+D+R+ DH+I+ + YSF Sbjct: 146 KNILKYNAKSIIIVHNHPSGNLEPSNDDRCLTKKIIDVLKLIDVRLSDHIIISNKGYYSF 205 Query: 153 AEHGLL 158 E+G + Sbjct: 206 LENGQI 211 >UniRef50_Q5FNC4 DNA repair protein RadC n=1 Tax=Gluconobacter oxydans RepID=Q5FNC4_GLUOX Length = 216 Score = 150 bits (380), Expect = 1e-35, Method: Composition-based stats. Identities = 58/158 (36%), Positives = 91/158 (57%), Gaps = 1/158 (0%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 ++ +S + M P R L + ALR +R P + + ++L +A E+FR Sbjct: 60 LESISDMGMHMLPMIRVLQEAALRY-NRARLPPEDVLDNEQKLLDYLTARLARENIEQFR 118 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 +L+L+ +N LIA E GT+N T V+PREV +RA+ A A++L HNHPSG+ TPS+AD Sbjct: 119 ILFLNEKNSLIADEAQARGTVNHTPVYPREVARRAVEIGATALVLVHNHPSGDPTPSEAD 178 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +T ++ L++V + + DH I+G + SF LL Sbjct: 179 LQMTMQVQAALEVVGVTIADHFIIGNGRHTSFRRSNLL 216 >UniRef50_Q4QPE3 Putative DNA repair radC-like protein n=5 Tax=Haemophilus influenzae RepID=Q4QPE3_HAEI8 Length = 156 Score = 150 bits (380), Expect = 1e-35, Method: Composition-based stats. Identities = 51/154 (33%), Positives = 92/154 (59%), Gaps = 5/154 (3%) Query: 10 EMTPQDRRLIQRALRAL-----DRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYL 64 ++ Q + ++++A L ++ ++ FT + + + + ERE F VL+L Sbjct: 3 KLNEQQQAILEQAQVILTKVMEEKPFYQGAQEFTEPSIAKLYFQTIIGNEERENFVVLFL 62 Query: 65 DNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLT 124 D ++LI E +F G+++ T V RE++++AL NA+A+I+ HNHP+G PS ADK +T Sbjct: 63 DRIHRLIKSEVMFQGSVSETSVSIREIIRQALKLNASAIIIGHNHPTGNVEPSDADKYIT 122 Query: 125 QRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +RL + +L+DI++ DH IV G + F ++ L+ Sbjct: 123 KRLKEACELMDIKLLDHFIVSGSASFCFTDNHLI 156 >UniRef50_C2BCF6 DNA repair protein RadC n=2 Tax=Anaerococcus RepID=C2BCF6_9FIRM Length = 226 Score = 150 bits (380), Expect = 1e-35, Method: Composition-based stats. Identities = 49/161 (30%), Positives = 93/161 (57%), Gaps = 3/161 (1%) Query: 1 MKQLSFLPGEMTPQDRRLI---QRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALERE 57 +++L+ + G + +++ Q R ++ L++ S E+++ ++ +RE Sbjct: 66 VEELTKINGIKEAKASKIVASLQFGKRIKEKILNKKKYQINSNEEAYEFIKDTISLKDRE 125 Query: 58 EFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPS 117 F + L+N+N++I+ E + G ++ + V+PREV K A+ +A ++ILAHNHPSG +PS Sbjct: 126 YFYTILLNNKNEVISKELISIGDLSSSIVNPREVFKPAIKKSAKSMILAHNHPSGNPSPS 185 Query: 118 QADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +AD +T RL+ +++DI V DHLI+G S + + Sbjct: 186 KADLLITHRLIDAGEILDITVLDHLIIGHGTYVSLKKDNYI 226 >UniRef50_A5URD0 UPF0758 protein RoseRS_0767 n=7 Tax=Bacteria RepID=Y767_ROSS1 Length = 233 Score = 150 bits (380), Expect = 1e-35, Method: Composition-based stats. Identities = 45/150 (30%), Positives = 84/150 (56%), Gaps = 3/150 (2%) Query: 11 MTPQDRRLIQRALRALDRHLHEPGVA---FTSTHAVREWLRLHMAALEREEFRVLYLDNQ 67 M ++ AL R L G S + +++ M+ L++E+ R + LD + Sbjct: 79 MGEAKTAQLKAALEIGRRLLLAGGDERFLIRSPTDAAQLMQIEMSHLDQEQLRAICLDTK 138 Query: 68 NQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRL 127 N++ +T++ G+++ + V E+ K + N+A++I+ HNHPSG+ TPS D +T+++ Sbjct: 139 NRVQKIQTVYIGSLHTSMVRIGEIFKEPIRLNSASIIVVHNHPSGDPTPSPEDVVVTRQI 198 Query: 128 VQVLQLVDIRVPDHLIVGGRQIYSFAEHGL 157 ++ +L+DI V DHL++G + S E GL Sbjct: 199 IEAGRLLDIDVLDHLVIGAGRFVSMRERGL 228 >UniRef50_D2MNQ5 Putative DNA repair protein RadC n=1 Tax=Bulleidia extructa W1219 RepID=D2MNQ5_9FIRM Length = 223 Score = 150 bits (379), Expect = 2e-35, Method: Composition-based stats. Identities = 50/158 (31%), Positives = 88/158 (55%), Gaps = 2/158 (1%) Query: 2 KQLSFLPG--EMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEF 59 ++L +PG ++ + I +R + +WL+ + +E+F Sbjct: 65 QELIQIPGISQIKALELLAIFEIVRRSSAAKLPTLPRVQHPSVLFDWLKQEIGTSLQEKF 124 Query: 60 RVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQA 119 V++L + ++++++ LF GTIN + V PRE+ K AL N+ +IL HNHPSG +PSQ Sbjct: 125 LVVFLASDQRVLSYKILFVGTINASMVFPREIFKEALLLNSPNIILVHNHPSGNLSPSQE 184 Query: 120 DKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGL 157 D +LT+R+ + QL+ ++V DH+IV +SF + G+ Sbjct: 185 DISLTKRIKEAGQLMGVKVLDHIIVTQSDYFSFVQEGI 222 >UniRef50_Q31EB6 UPF0758 protein Tcr_1917 n=5 Tax=Gammaproteobacteria RepID=Y1917_THICR Length = 225 Score = 150 bits (379), Expect = 2e-35, Method: Composition-based stats. Identities = 66/146 (45%), Positives = 91/146 (62%), Gaps = 2/146 (1%) Query: 14 QDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAH 73 Q + +++ + R + L + G A T V L+ H+ RE F ++ LD QNQ I Sbjct: 81 QLKAVLEMSRRHFESGLKK-GEALTQPEKVARLLQHHIGHQSREIFGLVLLDQQNQFIQF 139 Query: 74 ETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQL 133 LFTGTIN+ VH REV+K L +AAAVILAHNHPSG+ TPSQ+D+ LT ++ Q LQL Sbjct: 140 VPLFTGTINQATVHIREVLKTVLDHHAAAVILAHNHPSGDPTPSQSDRDLTHQIQQGLQL 199 Query: 134 VDIRVPDHLIVGGRQ-IYSFAEHGLL 158 ++ R DH+I+G YSF + G+L Sbjct: 200 IETRCLDHIILGDHGRWYSFTQQGIL 225 >UniRef50_C3WF45 Putative uncharacterized protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WF45_FUSMR Length = 154 Score = 149 bits (378), Expect = 2e-35, Method: Composition-based stats. Identities = 55/144 (38%), Positives = 95/144 (65%), Gaps = 6/144 (4%) Query: 21 RALRALDRHLHEPGVA------FTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHE 74 L+ L ++ + G+ + + E+L+++++ EEF++L+L+N N+LIA + Sbjct: 11 EELKELIHYISKEGIKRRDLTTIKNKENLLEFLKINLSPRNNEEFKILFLNNANKLIAEK 70 Query: 75 TLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLV 134 TLF GTI+++ V+PR V++ L +N+A VILAHNHPSG PS+ D LT+ L ++L+ + Sbjct: 71 TLFYGTIDKSAVYPRVVLEEVLRYNSAGVILAHNHPSGNLRPSKQDIQLTEALQELLEKI 130 Query: 135 DIRVPDHLIVGGRQIYSFAEHGLL 158 ++ V DH+I+G + +SF E GL+ Sbjct: 131 NVMVLDHMIIGDDEYFSFREEGLI 154 >UniRef50_A5FRP1 DNA repair protein RadC n=6 Tax=cellular organisms RepID=A5FRP1_DEHSB Length = 228 Score = 149 bits (378), Expect = 2e-35, Method: Composition-based stats. Identities = 55/161 (34%), Positives = 84/161 (52%), Gaps = 4/161 (2%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRH---LHEPGVAFTSTHAVREWLRLHMAALERE 57 +++LS L G + ++ A R E + V + + + ++E Sbjct: 69 VEELSKLKG-IGLAKACQLKAAFELAKRAGGIKGEYQPCIKTPEDVFQIIYPLVCDEKKE 127 Query: 58 EFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPS 117 F L LD +++LI + G++ + VHPREV K AL +AA+VILAHNHPSG+T PS Sbjct: 128 YFFCLMLDVKSRLIRVGHISVGSLEESVVHPREVFKEALSASAASVILAHNHPSGDTEPS 187 Query: 118 QADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D L+ RL + ++ I V DH+I+GG+ S GLL Sbjct: 188 HDDIGLSARLREAGGIMGIEVLDHIIIGGQSFTSLKRQGLL 228 >UniRef50_C0BM81 DNA repair protein RadC n=2 Tax=Bacteroidetes RepID=C0BM81_9BACT Length = 231 Score = 149 bits (378), Expect = 2e-35, Method: Composition-based stats. Identities = 52/123 (42%), Positives = 77/123 (62%) Query: 36 AFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRA 95 + +S+ A L+ + L EEF VLYLDN N LI L G T V R V+++A Sbjct: 109 SLSSSGAAFSILKPVLIGLTYEEFWVLYLDNSNVLIERSLLGKGGFTATVVDIRLVLQQA 168 Query: 96 LHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEH 155 + + A A+I+AHNHP+G PS +DK LTQ+L + +++DI++ DH+IVG + +SFA+ Sbjct: 169 IRWGATAMIVAHNHPTGNLKPSHSDKALTQKLKEAAKVLDIKLLDHIIVGKNEYFSFADQ 228 Query: 156 GLL 158 LL Sbjct: 229 NLL 231 >UniRef50_UPI000185C66E DNA repair protein RadC n=1 Tax=Capnocytophaga sputigena ATCC 33612 RepID=UPI000185C66E Length = 221 Score = 149 bits (377), Expect = 3e-35, Method: Composition-based stats. Identities = 52/153 (33%), Positives = 78/153 (50%), Gaps = 2/153 (1%) Query: 1 MKQLSFLPGEMTPQDRRLIQ--RALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREE 58 + QL+ G + ++ R HEP + V ++ + L EE Sbjct: 66 LAQLTTFKGIGEAKAITILAATEMGRRRAAETHEPQPKIEAPRHVFTLMQPLIGDLPHEE 125 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 F VLYL++ N++I L +G I T V R + K AL A ++IL HNHPSG TTPS+ Sbjct: 126 FWVLYLNSANRVIHKCRLSSGGITHTTVDIRLLFKNALEQGAVSLILVHNHPSGSTTPSK 185 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYS 151 D LT+R+ +DI++ DH+IV ++ YS Sbjct: 186 EDLELTERVRNAGDTLDIKLLDHIIVTEKEYYS 218 >UniRef50_C7NDB9 DNA repair protein RadC n=4 Tax=Fusobacteriaceae RepID=C7NDB9_LEPBD Length = 240 Score = 149 bits (377), Expect = 3e-35, Method: Composition-based stats. Identities = 54/150 (36%), Positives = 94/150 (62%), Gaps = 1/150 (0%) Query: 10 EMTPQDRRLIQRALR-ALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQN 68 E T +L+ + L + +H ++ TS + +L+ + + E F+VL+L+ QN Sbjct: 91 ERTVVFLKLLSEIIENGLYKKIHNKKISITSNIKLLNYLKCSLLKRDIEVFKVLFLNTQN 150 Query: 69 QLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLV 128 +L+ E LF GTI+R+ ++ RE++K+ L +NA +VIL HNHP+G PS +D LT+++ Sbjct: 151 ELMKEEELFYGTIDRSTIYIRELIKKILEYNAKSVILVHNHPAGSLKPSDSDILLTKKVK 210 Query: 129 QVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +V + ++IR+ DHLI+ + +SF E G+L Sbjct: 211 EVFESMEIRLLDHLIISEQGYFSFLEGGIL 240 >UniRef50_C7M9C6 DNA repair protein RadC n=1 Tax=Capnocytophaga ochracea DSM 7271 RepID=C7M9C6_CAPOD Length = 225 Score = 149 bits (376), Expect = 3e-35, Method: Composition-based stats. Identities = 58/161 (36%), Positives = 82/161 (50%), Gaps = 4/161 (2%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHE---PGVAFTSTHAVREWLRLHMAALERE 57 ++QL G + I A R E P H V ++ + L E Sbjct: 66 LQQLQAFKG-IGQAKAITILAATEMGRRRAAETPEPQPKIEVAHNVFVLMQPLIGELPHE 124 Query: 58 EFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPS 117 EF VLYL++ N++I LF+G I T V R + K AL A A+IL HNHPSG TTPS Sbjct: 125 EFWVLYLNSTNRVIHKARLFSGGITHTTVDVRLLFKTALEQGAIALILVHNHPSGSTTPS 184 Query: 118 QADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 + D LTQR+ +++DI++ DH+IV ++ SF + L Sbjct: 185 KEDIELTQRVKTAGEMLDIKLLDHVIVTEKEYLSFLDERLF 225 >UniRef50_UPI0001C34E02 DNA repair protein RadC n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001C34E02 Length = 243 Score = 149 bits (376), Expect = 3e-35, Method: Composition-based stats. Identities = 42/145 (28%), Positives = 76/145 (52%) Query: 14 QDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAH 73 Q + + + R + +F ++ + M +E+EE ++ + +N LI Sbjct: 99 QLLCIGELSRRIWKTLAQKEIKSFDGPESIAAFYMEDMRHMEQEELHLMMFNTKNMLIRE 158 Query: 74 ETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQL 133 LF GT+N + RE+ AL ++A + L HNHPSG+ +PS D LT+++ Q +L Sbjct: 159 SCLFRGTVNASVASAREIFIEALRYHAVRLALVHNHPSGDPSPSGEDIRLTRQVAQAGEL 218 Query: 134 VDIRVPDHLIVGGRQIYSFAEHGLL 158 + + + DH+I+G +SF E G++ Sbjct: 219 LGVTLLDHVIIGDNSYFSFKERGII 243 >UniRef50_D1VVJ8 DNA repair protein RadC-like protein n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VVJ8_9FIRM Length = 236 Score = 149 bits (376), Expect = 4e-35, Method: Composition-based stats. Identities = 55/161 (34%), Positives = 90/161 (55%), Gaps = 4/161 (2%) Query: 1 MKQLSFLPGEMTPQDRRLIQRAL---RALDRHLHEPGVAFTSTHAVREWLRLHMAALERE 57 M +L+ + G + +I AL L+ TS +++ M LE E Sbjct: 76 MDKLTAIKG-VGQAKAAMIMAALTLAERLNSSSIYDKKKITSPEDAAKYVMASMRDLETE 134 Query: 58 EFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPS 117 FR++ L+ + ++ + G IN T VHPREV ++A+ A ++IL HNHP+G+ +PS Sbjct: 135 VFRIIILNTKKEIKYIREISHGIINMTVVHPREVFRQAISDGAHSIILLHNHPTGDPSPS 194 Query: 118 QADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 Q D+ LT+RLV+V ++V I + DH+I+G +SF + G+L Sbjct: 195 QEDRNLTRRLVEVSKIVGIDICDHIIIGDNTFFSFLKEGIL 235 >UniRef50_B5V5B9 RadC n=5 Tax=Firmicutes RepID=B5V5B9_BACCE Length = 168 Score = 149 bits (376), Expect = 4e-35, Method: Composition-based stats. Identities = 53/147 (36%), Positives = 74/147 (50%) Query: 12 TPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLI 71 P R I + + L S R + +RE F VL LD +NQ Sbjct: 22 RPAKRVDIVKLKMIKESSLLYKERRVKSPEDASLLFRQFLDGADREYFIVLCLDIKNQPT 81 Query: 72 AHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVL 131 G++N + VHPREV+K A+ NAA++I+AHNHPS + TPS D +T+RL++ Sbjct: 82 TINVCHIGSLNSSIVHPREVLKPAIISNAASIIVAHNHPSNDPTPSSEDLEVTKRLIEAG 141 Query: 132 QLVDIRVPDHLIVGGRQIYSFAEHGLL 158 ++V I V DHLIV S E G + Sbjct: 142 KVVGIEVLDHLIVCEESFVSLKEKGYM 168 >UniRef50_C0Q9Z9 RadC3 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0Q9Z9_DESAH Length = 279 Score = 148 bits (375), Expect = 4e-35, Method: Composition-based stats. Identities = 54/142 (38%), Positives = 83/142 (58%) Query: 17 RLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETL 76 +LI+ ++H + +L + RE F ++LD +N+++A E L Sbjct: 126 KLIKAVSDRYLEQRIRSKTVLKNSHDLCAFLGHAIGHRPREVFVGIFLDAKNRVLASEIL 185 Query: 77 FTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDI 136 F G+++ + V+PREV+ +AL AAA+I AHNHPSGET+PS D +T+RL L I Sbjct: 186 FEGSLSSSAVYPREVIAKALEHRAAALIFAHNHPSGETSPSPEDLAITRRLFFALAHAGI 245 Query: 137 RVPDHLIVGGRQIYSFAEHGLL 158 V +HLI GG + YSFA+ G++ Sbjct: 246 TVHEHLITGGERFYSFADQGII 267 >UniRef50_C6XNR3 DNA repair protein RadC n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XNR3_HIRBI Length = 272 Score = 148 bits (375), Expect = 4e-35, Method: Composition-based stats. Identities = 53/127 (41%), Positives = 81/127 (63%) Query: 32 EPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREV 91 + ++ A+ +R+ + E+FRVL+LD++NQLIA E GTIN V+PRE+ Sbjct: 146 KARPIISNWGALLSHVRIALQHETEEQFRVLFLDHKNQLIADERQSQGTINHAPVYPREL 205 Query: 92 VKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYS 151 KRAL +A+A+IL HNHPSG+ TPS+AD +T+ ++ + ++I + DHLIVG + I S Sbjct: 206 AKRALELSASALILVHNHPSGDPTPSRADIDVTREIMDAFEPLEITIHDHLIVGKKGITS 265 Query: 152 FAEHGLL 158 L+ Sbjct: 266 LKAKNLI 272 >UniRef50_C0GMV6 DNA repair protein RadC n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GMV6_9DELT Length = 226 Score = 148 bits (375), Expect = 4e-35, Method: Composition-based stats. Identities = 47/132 (35%), Positives = 71/132 (53%) Query: 27 DRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEV 86 DR S V R + EEF + +DN+N+LI E + GT+++ V Sbjct: 95 DRSGLSTRSTLDSPEKVARLARSRLQFKSIEEFWAIMVDNKNRLIDFEKMSRGTVDQAPV 154 Query: 87 HPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGG 146 PRE++ AL A+ VIL HNHP G+ PS D+ LT+++ +V + +R+ DH+I+ Sbjct: 155 FPREILTVALEKRASGVILLHNHPGGDPHPSFQDRELTRKIREVSTALGVRLLDHVIISE 214 Query: 147 RQIYSFAEHGLL 158 +SF EHG L Sbjct: 215 DSFFSFQEHGFL 226 >UniRef50_C0R2T1 DNA repair protein RadC n=7 Tax=Wolbachia RepID=C0R2T1_WOLWR Length = 224 Score = 148 bits (374), Expect = 6e-35, Method: Composition-based stats. Identities = 46/160 (28%), Positives = 93/160 (58%), Gaps = 2/160 (1%) Query: 1 MKQLSFLPGEMTPQDRRL--IQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREE 58 ++ L + G + +++A R + + + ++LR+ + +L +E Sbjct: 65 LEALQNVDGVSNAAISAIFCVKQAFVRSAREEIKDLPIIDNWEKLLDYLRISIGSLNKEN 124 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 FRV+Y++ + +LIA + GT+++T ++ RE++KRAL + +++++HNHPS +T PS Sbjct: 125 FRVIYMNKKYRLIAEDLQNIGTVDQTPLYVREIIKRALLIGSTSIVISHNHPSRDTQPSN 184 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +D +LT++L + Q + I + DH+I+ +SF E+ LL Sbjct: 185 SDISLTRQLAEACQSIGIELIDHIIITFSSYFSFKENRLL 224 >UniRef50_A5FMW5 UPF0758 protein Fjoh_0413 n=33 Tax=Bacteroidetes RepID=Y413_FLAJ1 Length = 229 Score = 148 bits (374), Expect = 6e-35, Method: Composition-based stats. Identities = 55/161 (34%), Positives = 82/161 (50%), Gaps = 4/161 (2%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAF---TSTHAVREWLRLHMAALERE 57 + QL G + I AL R E + TS+ ++ + L E Sbjct: 70 VSQLIKFKG-IGEAKAVSIVAALELGRRQRAEDILKLKKITSSKDAFTIMQPIIGELPHE 128 Query: 58 EFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPS 117 EF VL+L+N N++I+ L G I T V R V K L A +IL HNHPSGE PS Sbjct: 129 EFWVLFLNNSNKVISKAQLSKGGIAGTIVDVRLVFKLGLENGATGLILCHNHPSGELNPS 188 Query: 118 QADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 QADK +T+++ +++D+++ DHLI+ + YSF + G+ Sbjct: 189 QADKQITKKIKTAGEILDVKILDHLIITETKYYSFVDEGIF 229 >UniRef50_A8YUM9 DNA repair protein RadC n=9 Tax=Lactobacillus RepID=A8YUM9_LACH4 Length = 207 Score = 147 bits (373), Expect = 7e-35, Method: Composition-based stats. Identities = 46/156 (29%), Positives = 81/156 (51%), Gaps = 1/156 (0%) Query: 4 LSFLPGEMTPQDRRL-IQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVL 62 + F+ G + + + L + S+ V +L + ++EE L Sbjct: 52 VQFITGPNCSSSLAITAEEVMDRLRMASSKRKPVLASSVEVGTYLADKLVGHKQEELWAL 111 Query: 63 YLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKT 122 Y+DN N+++A + +F GT+N++ HPRE+ + A+ ++ + + +AHNHPSG+ PS D Sbjct: 112 YVDNGNRIVAEKKIFQGTLNKSVAHPREIFRWAVIYDCSGIFIAHNHPSGKLIPSSNDFE 171 Query: 123 LTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 LT+ L + +++ I + DH IVG Q S E L Sbjct: 172 LTKDLYRAAKMMKIDLLDHFIVGQGQYLSMREKELF 207 >UniRef50_A7V531 Putative uncharacterized protein n=1 Tax=Bacteroides uniformis ATCC 8492 RepID=A7V531_BACUN Length = 196 Score = 147 bits (373), Expect = 7e-35, Method: Composition-based stats. Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 2/157 (1%) Query: 4 LSFLPGEMTPQDRRLIQRALRALDRHLHEP--GVAFTSTHAVREWLRLHMAALEREEFRV 61 L L +TP RR+ A+ R L + + V E + + L EEF V Sbjct: 40 LEKLFSSLTPGRRRVAVAAVEMYKRQLSQQVERRQIRMSKDVYELMEPLIGDLPNEEFWV 99 Query: 62 LYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADK 121 + ++ ++I + G I++T R +++ + A HNHPSG + PS DK Sbjct: 100 VSINQAGRIIKKVRISVGGIDQTSADIRLIMRVLIDTGAVQFAAVHNHPSGNSRPSNEDK 159 Query: 122 TLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 LT++L + L +IR+ DH+I+ YSF + GL+ Sbjct: 160 RLTEQLKKAAGLFNIRMIDHVIITNGGYYSFGDEGLI 196 >UniRef50_Q6F7Z8 UPF0758 protein ACIAD3126 n=19 Tax=Proteobacteria RepID=Y3126_ACIAD Length = 271 Score = 147 bits (373), Expect = 8e-35, Method: Composition-based stats. Identities = 52/161 (32%), Positives = 89/161 (55%), Gaps = 3/161 (1%) Query: 1 MKQLSFLPGEMTPQDRRLI---QRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALERE 57 +++LS G T + L+ + R L+ + H+ + S+ V ++LR + ++E Sbjct: 82 LQELSHFHGIGTTKYAHLMAVKELGRRYLNHYFHQDALNLNSSRLVLDYLRYELLGEKQE 141 Query: 58 EFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPS 117 F VL LD++ + + + LF G++N + ++ AL +A +++AHNHP G+ PS Sbjct: 142 VFAVLCLDSELRKLNFKKLFYGSLNACNISINHTLRYALQQHACHIVIAHNHPFGKAEPS 201 Query: 118 QADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 AD LT +L Q QLV+I++ DH I+ +SFAE LL Sbjct: 202 AADLDLTHQLYQACQLVEIKLLDHFIIAKDGTFSFAERALL 242 >UniRef50_C7JGI7 DNA repair protein RadC n=8 Tax=Acetobacter pasteurianus RepID=C7JGI7_ACEP3 Length = 249 Score = 147 bits (372), Expect = 1e-34, Method: Composition-based stats. Identities = 56/157 (35%), Positives = 90/157 (57%), Gaps = 1/157 (0%) Query: 2 KQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRV 61 K + LP + + LR L G+ ST + +LR M +RE+ RV Sbjct: 94 KSIKALPEAVRVLLMLAREAGLRIQRARLRRSGILADSTQ-LYAYLRAVMGPEKREQVRV 152 Query: 62 LYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADK 121 L+L+++++L+A + + GT++ T V+PRE+V RAL NA ++L HNHPSG+ TPS D Sbjct: 153 LFLNDKHELLADDVMGQGTVDHTPVYPREIVARALQLNATMLVLVHNHPSGDPTPSADDV 212 Query: 122 TLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +T ++ ++++I V DH+IV G ++ S E G L Sbjct: 213 VMTTQICGAAKIMNIHVWDHIIVAGEKLLSMREAGFL 249 >UniRef50_Q7UL21 DNA repair protein n=4 Tax=Bacteria RepID=Q7UL21_RHOBA Length = 319 Score = 147 bits (372), Expect = 1e-34, Method: Composition-based stats. Identities = 53/164 (32%), Positives = 83/164 (50%), Gaps = 10/164 (6%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHE------PGVAFTSTHAVREWLRLHMAAL 54 + +L + +T I + R P V TST E+ A L Sbjct: 155 VSELRHITKAVTKASYCQIMAGIELGRRATEAARERPVPIVKITSTTEATEYCAQKFAYL 214 Query: 55 E----REEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHP 110 +EEF ++ LD +++ I + GT++ + VHPREV + A+ AAAV+L HNHP Sbjct: 215 AGDAVQEEFHIVTLDTKHKPIRTHRITVGTLDSSLVHPREVFRPAIRDAAAAVLLVHNHP 274 Query: 111 SGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAE 154 SG+ TPS+ D +T+RL + +L+ I V DH++V ++ S E Sbjct: 275 SGDPTPSREDHAVTERLTEAGKLIGITVLDHIVVAKQRCLSLRE 318 >UniRef50_Q2GL92 DNA repair protein RadC n=12 Tax=Rickettsiales RepID=Q2GL92_ANAPZ Length = 232 Score = 147 bits (372), Expect = 1e-34, Method: Composition-based stats. Identities = 51/150 (34%), Positives = 84/150 (56%) Query: 9 GEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQN 68 G+ + ++ AL + R V + ++L++ + E F VLYL+ + Sbjct: 83 GDSSVAMLVCVREALIRVMRGNITSCVMLDKWPKLIDYLKVKIGNSTIENFLVLYLNKRY 142 Query: 69 QLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLV 128 LIA E TGT++ T ++ REV+++AL A ++++HNHPSG+ PS+AD +T +L Sbjct: 143 SLIADEVQSTGTVDETPLYIREVIRKALLCGAVYIVISHNHPSGDPKPSKADINVTNKLR 202 Query: 129 QVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +DI + DH+IV ++ YSF HGLL Sbjct: 203 IACNSMDIELVDHVIVTSKRHYSFKTHGLL 232 >UniRef50_B9MPC4 DNA repair protein RadC n=2 Tax=Clostridia RepID=B9MPC4_ANATD Length = 232 Score = 147 bits (372), Expect = 1e-34, Method: Composition-based stats. Identities = 52/150 (34%), Positives = 78/150 (52%) Query: 9 GEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQN 68 GE + LI + R + + A E+++ + E F V+ LD Q Sbjct: 78 GENSAILISLISQISRRYLADKNRKTFQLRNVEAAAEYIKSLFVGRKNEVFYVICLDTQL 137 Query: 69 QLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLV 128 +I LF GT+ V+PR+VV+ + +NA++VILAHNHP G PS D TQ++V Sbjct: 138 NVIYSVPLFEGTVKEAVVYPRKVVECVIRYNASSVILAHNHPGGSVRPSMDDIKTTQKIV 197 Query: 129 QVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 L + + V DH IV + YSFA++G+L Sbjct: 198 NALSTIGVAVNDHFIVAKDEYYSFAQNGML 227 >UniRef50_B3JIE2 Putative uncharacterized protein n=10 Tax=Bacteroidales RepID=B3JIE2_9BACE Length = 220 Score = 147 bits (371), Expect = 1e-34, Method: Composition-based stats. Identities = 52/157 (33%), Positives = 85/157 (54%), Gaps = 2/157 (1%) Query: 4 LSFLPGEMTPQDRRLIQRALRALDRHLHEP--GVAFTSTHAVREWLRLHMAALEREEFRV 61 LS + +TP +++ A+ R A S++ V + + + + EE V Sbjct: 61 LSDVLETLTPSRKKVAYAAIELYKRLKEGQVESPALLSSNNVYKMMHPVLCDIATEEMWV 120 Query: 62 LYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADK 121 L L++ ++LI + G IN V R ++K+AL++NA + I+ HNHPSG PS AD Sbjct: 121 LLLNSSSKLIRKVRISCGGINTAPVDIRVIMKQALYYNAVSFIMVHNHPSGARKPSSADD 180 Query: 122 TLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 LT+ + + + +DIR+ DH+IV G YS+A+ G L Sbjct: 181 RLTEAVKKAAETLDIRLVDHVIVAGNNYYSYADEGRL 217 >UniRef50_B2V8J4 DNA repair protein RadC n=5 Tax=Aquificales RepID=B2V8J4_SULSY Length = 229 Score = 147 bits (371), Expect = 1e-34, Method: Composition-based stats. Identities = 48/158 (30%), Positives = 83/158 (52%), Gaps = 4/158 (2%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 +K++ + Q +I+ A R H + TS +L+ ++ +E Sbjct: 76 LKKIKGIGEAKALQILAIIEIAKRM---DDHAEKIKITSVSDAFNYLKF-LSKETQEHMV 131 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 LYL++ N LIA E + G++N V PR+++ A+ N +I++HNHP+ + TPSQ D Sbjct: 132 ALYLNSSNHLIAQEVIAKGSLNVVRVLPRDILYYAIKHNCNGIIISHNHPNNDPTPSQED 191 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 T++L + + + DH+IVG + YSFA+ GL+ Sbjct: 192 IEFTKKLQTLANELGFDLLDHIIVGKKDFYSFAKAGLI 229 >UniRef50_B0S3Y4 UPF0758 protein FMG_0357 n=2 Tax=Finegoldia magna RepID=Y357_FINM2 Length = 223 Score = 147 bits (371), Expect = 2e-34, Method: Composition-based stats. Identities = 52/155 (33%), Positives = 79/155 (50%), Gaps = 2/155 (1%) Query: 1 MKQLSFLPGEMTPQDRRLIQ--RALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREE 58 +++L + G + ++ R L + +V E + + + E Sbjct: 64 VEELMKIKGIGMAKATSILAGIEIGRRLSLRKAMDSFSLNDPDSVAEIFCNEIGSCDVEN 123 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 F L LD +N++I+ E + GTIN++ VHPREV K A+ A ++IL HNHPSG PS Sbjct: 124 FYALLLDTKNRIISKELISKGTINQSIVHPREVFKSAIKKGANSIILVHNHPSGSLIPSN 183 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFA 153 AD +T+RL +V LV I+V DH+IV S Sbjct: 184 ADIEVTKRLDKVGDLVGIQVLDHIIVSSNDSLSMR 218 >UniRef50_C0BG63 DNA repair protein RadC n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BG63_9BACT Length = 232 Score = 146 bits (370), Expect = 2e-34, Method: Composition-based stats. Identities = 52/150 (34%), Positives = 78/150 (52%) Query: 9 GEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQN 68 GE+ + + + + + S+ V E + + + L EEF +LYL+ N Sbjct: 83 GEVKAIKLKAVVELSKRFQKQQPDKTTVLNSSKIVYESIYMDLDTLPHEEFWILYLNQSN 142 Query: 69 QLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLV 128 +L+ L G I +T V R KRA A +ILAHNHPSG TPS +D+ +T++ Sbjct: 143 RLLEKYRLSKGGITQTTVDLRLAFKRAFEVGATGLILAHNHPSGGLTPSSSDEQITRKFK 202 Query: 129 QVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 VD+R+ DHLIV + +SFA+ GLL Sbjct: 203 LAAASVDLRILDHLIVSKKGYFSFADEGLL 232 >UniRef50_B2URH1 DNA repair protein RadC n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2URH1_AKKM8 Length = 246 Score = 146 bits (369), Expect = 2e-34, Method: Composition-based stats. Identities = 46/147 (31%), Positives = 73/147 (49%), Gaps = 8/147 (5%) Query: 14 QDRRLIQRALRALDRHLHE--PGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLI 71 + A R L E + V ++L M E+E VL LD + +LI Sbjct: 81 AKAATLSAAFELGARALRETLSRQPIQTPEDVYDYLTTAMRWKEKETVLVLLLDTKCRLI 140 Query: 72 AHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVL 131 + +GT+N + HPR++++ + NA ILAHNHPSG PS+ D LT+R+ + Sbjct: 141 KPVEISSGTLNESIAHPRDILRPTVIHNAYGFILAHNHPSGNPAPSRTDDLLTERVRECS 200 Query: 132 QLVDIRVPDHLIVGG------RQIYSF 152 +L+ +R DH+I+G + YS+ Sbjct: 201 KLLGVRFLDHVIIGKPTETTNKNYYSY 227 >UniRef50_Q64AS5 DNA repair proteins n=1 Tax=uncultured archaeon GZfos29E12 RepID=Q64AS5_9ARCH Length = 403 Score = 146 bits (369), Expect = 2e-34, Method: Composition-based stats. Identities = 46/153 (30%), Positives = 78/153 (50%), Gaps = 5/153 (3%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRH----LHEPGVAFTSTHAVREWLRLHMAALER 56 + +L + G + I RH + V V + + ++ Sbjct: 244 LNELQEIKG-IGFAKACQIIALFEFNKRHNKAVKTKEIVTIEKPEDVYNYFVDELKDKKK 302 Query: 57 EEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTP 116 E F L LD++N+LI + + GT++ + VHPREV K A+ +AA VIL HNHPSG+ P Sbjct: 303 EHFYALLLDSKNKLIKKDLVSVGTLDNSLVHPREVFKEAIKNSAAGVILVHNHPSGDPEP 362 Query: 117 SQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQI 149 S+ D +TQ++ + +++I+V DH+I+ + Sbjct: 363 SENDVEITQKIAKAGNILNIKVLDHVIIAEKGW 395 >UniRef50_D1QST5 DNA repair protein RadC n=13 Tax=Bacteroidales RepID=D1QST5_9BACT Length = 234 Score = 146 bits (368), Expect = 3e-34, Method: Composition-based stats. Identities = 52/161 (32%), Positives = 76/161 (47%), Gaps = 4/161 (2%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRH---LHEPGVAFTSTHAVREWLRLHMAALERE 57 ++QL G + P I A R E + S+ A+ E+L M L+ E Sbjct: 75 IRQLEQYKG-VGPAKAITILAACELGKRRAMEKAEERQSIDSSKAIYEYLHPRMQDLDVE 133 Query: 58 EFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPS 117 E V+ L+ +LI + G I+ T V R ++K AL NA + LAHNHPS PS Sbjct: 134 EAWVMLLNQHYKLIKALRISHGGISETAVDVRIILKEALLCNATVLALAHNHPSNHAQPS 193 Query: 118 QADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D LTQR+ + + + I DH+I+ YS+ + G L Sbjct: 194 GPDDQLTQRVKKACEALRIYFLDHVIITDGTYYSYHDSGRL 234 >UniRef50_C4FYP9 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4FYP9_ABIDE Length = 240 Score = 146 bits (368), Expect = 3e-34, Method: Composition-based stats. Identities = 50/149 (33%), Positives = 79/149 (53%) Query: 9 GEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQN 68 G + + I R + R H + + + M + E +L LD + Sbjct: 79 GPVKAVEIICICELARRIARTRHSYDEPLDTAAKISKRYMEEMRHFKEEHVVLLLLDIKC 138 Query: 69 QLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLV 128 +LI T+ GTIN++ + PREV +AL + A ++L HNHPSG+ TPS+AD +T +++ Sbjct: 139 RLIKELTISIGTINQSFLRPREVFIQALKYEAVNLVLIHNHPSGDPTPSKADIIVTDKIL 198 Query: 129 QVLQLVDIRVPDHLIVGGRQIYSFAEHGL 157 +V +LV I + DH+I+G SF E GL Sbjct: 199 EVSELVGIPLVDHIIIGDCCYVSFREKGL 227 >UniRef50_Q9LAI3 RadC (Fragment) n=2 Tax=Firmicutes RepID=Q9LAI3_BACSQ Length = 119 Score = 146 bits (368), Expect = 3e-34, Method: Composition-based stats. Identities = 43/119 (36%), Positives = 73/119 (61%) Query: 40 THAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFN 99 ++ + ++R+ F V+ LD +NQ A G++N + VHPREV+K A+ N Sbjct: 1 PEDAYNLVKCFLVDVDRDYFLVICLDTKNQPTAINICHVGSLNASLVHPREVMKPAILSN 60 Query: 100 AAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +A+VI+AHNHPS + TPS+ D +T+RL++ +++ I + DH++VGG + S E + Sbjct: 61 SASVIVAHNHPSLDPTPSKEDINVTKRLIEAGRIMGIDILDHIVVGGNKYVSLKEKRYI 119 >UniRef50_Q03R16 DNA repair protein n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03R16_LACBA Length = 220 Score = 145 bits (367), Expect = 3e-34, Method: Composition-based stats. Identities = 53/160 (33%), Positives = 86/160 (53%), Gaps = 6/160 (3%) Query: 2 KQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFT---STHAVREWLRLHMAALEREE 58 +Q +++ G + R+ + A+ P ++ + + L + L +E+ Sbjct: 50 QQRAYISGN---RQRQALLTAIELGRWAEKAPRPILGEVLASSQLGQVLMDDLRYLLQEQ 106 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 VL LD Q+++I +T+F GT+N VHPRE+ + A+ AA VI+AHNHPSG+ PS Sbjct: 107 LEVLALDAQHRIIERQTVFQGTLNSCPVHPREIFRVAVMSGAATVIVAHNHPSGQPQPST 166 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +D+ QRL QL+ I + D +VG +SF E G+L Sbjct: 167 SDRAFMQRLAACGQLMGIPLLDGFVVGLHSYFSFKEAGIL 206 >UniRef50_C7GYN9 DNA repair protein RadC n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GYN9_9FIRM Length = 230 Score = 145 bits (367), Expect = 4e-34, Method: Composition-based stats. Identities = 48/161 (29%), Positives = 74/161 (45%), Gaps = 4/161 (2%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEP---GVAFTSTHAVREWLRLHMAALERE 57 ++ L G + RLI AL R + A+ + ++E Sbjct: 65 LEDLMNFNGIGEAKAMRLI-AALELGKRQSEISVNIKRKIGNPEAIFHLFHEKLRYEKKE 123 Query: 58 EFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPS 117 F + L+ +IA E + G + HPREV K A+ A++VIL HNHPSG TPS Sbjct: 124 NFYAVMLNTAKHVIAKERISIGGLACAYAHPREVFKSAIKKAASSVILVHNHPSGCVTPS 183 Query: 118 QADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D +T+RL+ +++ I V DH+I+G S + G + Sbjct: 184 DEDVLITKRLINAGRIIGIEVIDHIIIGNENYLSMKKEGYI 224 >UniRef50_Q5WTW4 UPF0758 protein lpl2409 n=6 Tax=Legionella RepID=Y2409_LEGPL Length = 227 Score = 145 bits (367), Expect = 4e-34, Method: Composition-based stats. Identities = 58/150 (38%), Positives = 90/150 (60%), Gaps = 1/150 (0%) Query: 9 GEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQN 68 GE+ + + D + + ++T +L+ + + E F L+LDNQ+ Sbjct: 75 GEVRYAQLQAAKEICHRSDFIDLQKEIRLSNTQQTYAFLKKRLRDYKNETFAALFLDNQH 134 Query: 69 QLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLV 128 ++IA+E LF+GTIN V+PR +V+R L NAAA+ILAHNHPSG + SQ D +T+R+ Sbjct: 135 RIIAYEELFSGTINTATVYPRPIVERVLQLNAAALILAHNHPSGLSDASQQDLAITERIR 194 Query: 129 QVLQLVDIRVPDHLIVGGRQIYS-FAEHGL 157 L LVD R+ DH+++G ++YS FAE+ Sbjct: 195 DALDLVDARLLDHIVIGDNEVYSIFAENKW 224 >UniRef50_B0MF12 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=B0MF12_9FIRM Length = 282 Score = 145 bits (367), Expect = 4e-34, Method: Composition-based stats. Identities = 47/137 (34%), Positives = 73/137 (53%) Query: 22 ALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTI 81 ++R +D + + + L +++RE F VL L Q+I GT+ Sbjct: 3 SIRLVDDPPIYSEDKIQNPNDAVQLLLKEFDSVDRELFFVLNLKTNGQVINVNIASMGTL 62 Query: 82 NRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDH 141 N + PRE+ K ++ NAA+VIL HNHPSG+ TPS+ D +T+RLV +L+ I V DH Sbjct: 63 NSCILSPREIFKASILSNAASVILMHNHPSGDCTPSKQDVLMTKRLVACGELIGITVLDH 122 Query: 142 LIVGGRQIYSFAEHGLL 158 +I+G S E ++ Sbjct: 123 VILGKETYLSMKEANMM 139 >UniRef50_Q1RK76 DNA repair protein RadC n=11 Tax=Rickettsia RepID=Q1RK76_RICBR Length = 249 Score = 145 bits (367), Expect = 4e-34, Method: Composition-based stats. Identities = 55/143 (38%), Positives = 91/143 (63%), Gaps = 4/143 (2%) Query: 16 RRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHET 75 R LI RAL+ + +++ S ++ ++L+++M + E+FRVL+L+ +N LIA E Sbjct: 111 RELINRALK--QKIINKN--IIASWGSLIDYLKVNMGNMRLEQFRVLFLNKKNILIADEV 166 Query: 76 LFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVD 135 L GTI++ V+PRE++KRAL A+ +IL HNHPSG PS+A +T +V + + ++ Sbjct: 167 LSQGTIDQAAVYPREIIKRALFNEASNIILVHNHPSGSPDPSKAGIDMTNIIVDMCKTIN 226 Query: 136 IRVPDHLIVGGRQIYSFAEHGLL 158 I V DH+I+ + +SF + LL Sbjct: 227 IIVHDHVIISNNKYFSFKSNMLL 249 >UniRef50_C7PSZ0 DNA repair protein RadC n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PSZ0_CHIPD Length = 237 Score = 145 bits (366), Expect = 5e-34, Method: Composition-based stats. Identities = 47/160 (29%), Positives = 73/160 (45%), Gaps = 2/160 (1%) Query: 1 MKQLSFLPGEMTPQDRRLIQ--RALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREE 58 ++QL + G T + ++I R + + + E Sbjct: 77 LEQLKKIQGIGTAKATKIIAVMELARRRQAGCMLQKKTIRQGRDAALYFKPLLGDAALES 136 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 F VLYL++ ++++ H + G I T V P+ + + AL A VIL HNHPSG PS Sbjct: 137 FHVLYLNHASRVLQHRCISIGGITGTIVDPKVIFREALELGATQVILCHNHPSGNLRPST 196 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 AD +T++L +L+DI V DH+IV S E G + Sbjct: 197 ADIQITEKLKAAGRLLDISVLDHIIVSEAGYCSMVEEGFI 236 >UniRef50_C6VI64 DNA repair protein n=3 Tax=Lactobacillus plantarum RepID=C6VI64_LACPJ Length = 211 Score = 145 bits (366), Expect = 5e-34, Method: Composition-based stats. Identities = 47/119 (39%), Positives = 72/119 (60%) Query: 40 THAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFN 99 + + L A LE+E+ ++L LD +NQ+I + +F GT+N PRE++K AL Sbjct: 87 SEQLGAVLARDFANLEQEQLQLLCLDTKNQVIKRQVVFQGTLNSCPAQPREIIKVALTTP 146 Query: 100 AAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 A V++AHNHPSG+ TPS+ D T+RL +L+ + + D I+G +SFAE G+L Sbjct: 147 TARVVIAHNHPSGDVTPSKKDVEFTKRLQLACELMGLPLLDSFIIGVNDYFSFAEQGVL 205 >UniRef50_C4V569 DNA repair protein RadC n=2 Tax=Selenomonas RepID=C4V569_9FIRM Length = 225 Score = 145 bits (366), Expect = 5e-34, Method: Composition-based stats. Identities = 56/158 (35%), Positives = 78/158 (49%), Gaps = 3/158 (1%) Query: 3 QLSFLPGEMTPQDRRLIQRALRALDRHLHEPG--VAFTSTHAVREWLRLHMAALEREEFR 60 + + +PG + + AL R V L A RE F Sbjct: 69 EFARIPG-IGSAKAATVLAALELGRRAYAGTRGMPRMNEAADVAALLSARCQAERREHFF 127 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 VL L +N+++ + TGT+ T VHPREV + A+ +AA +I+AHNHPSG+ PS D Sbjct: 128 VLPLSAKNEVLMIADVSTGTLTNTLVHPREVFEPAIRCSAAHIIIAHNHPSGDPAPSAED 187 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 LT+ L + L+ I V DH+IV +SFAE GLL Sbjct: 188 HRLTRSLHEAGALLGIPVADHVIVARDGFFSFAEAGLL 225 >UniRef50_B5CP31 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B5CP31_9FIRM Length = 168 Score = 144 bits (365), Expect = 7e-34, Method: Composition-based stats. Identities = 53/152 (34%), Positives = 82/152 (53%), Gaps = 7/152 (4%) Query: 14 QDRRLIQRALRALDRHLHEP-----GVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQN 68 Q+ R ++ L ++ L S AV E + ++ +RE F +L + N Sbjct: 6 QEIRTMENELEVVNIRLVREPSLYSEQILDSPQAVVELMAKELSQYDREVFCILNMKNNG 65 Query: 69 QLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLV 128 Q+I + GTIN + V PREV K ++ NA+A+I HNHPSG PS+ D +T++L Sbjct: 66 QVINMNLVSVGTINASLVIPREVFKSSILANASAIIGLHNHPSGNVKPSKEDMIVTRKLQ 125 Query: 129 QVLQLVDIRVPDHLIVGG--RQIYSFAEHGLL 158 + QL+ I + DH+IVGG ++ SF E +L Sbjct: 126 KCGQLLGIELLDHIIVGGTNGKMLSFREEKML 157 >UniRef50_Q0FHF8 DNA repair protein RadC n=1 Tax=Roseovarius sp. HTCC2601 RepID=Q0FHF8_9RHOB Length = 168 Score = 144 bits (365), Expect = 7e-34, Method: Composition-based stats. Identities = 54/151 (35%), Positives = 84/151 (55%), Gaps = 4/151 (2%) Query: 11 MTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQL 70 + + I A L RH V S + ++L L+ E FRVL LD +N+L Sbjct: 17 FSEAEIETIDAARDILRRHARATAV-LQSWTMLTDYLALNAVRERVEVFRVLLLDRKNKL 75 Query: 71 IAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQV 130 I + + G+I+ V+ EV++ AL +A+A+IL HNHPSG+ PSQAD +T+++V Sbjct: 76 IRDKIMSRGSIDHVPVYVSEVMRSALVLDASALILCHNHPSGDPQPSQADIDMTRKIVDA 135 Query: 131 LQLVDIRVPDHLIVGGRQ---IYSFAEHGLL 158 +++DI + DHLIVG + +S G+L Sbjct: 136 CRVMDITLHDHLIVGFGREQAAFSMRAAGML 166 >UniRef50_UPI0001BC61BD DNA repair protein radC n=3 Tax=Fusobacterium RepID=UPI0001BC61BD Length = 227 Score = 144 bits (365), Expect = 8e-34, Method: Composition-based stats. Identities = 48/118 (40%), Positives = 76/118 (64%) Query: 41 HAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNA 100 + ++R + RE+F VL+L+ NQL+ E LF G+I+R+ V+PRE++++ L + A Sbjct: 110 EDLISYVRAQIGFENREKFFVLFLNTANQLLCSEELFQGSIDRSAVYPREILEKVLKYKA 169 Query: 101 AAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +VI AHNHPSG T PS+ D LT+ + L++ D+ + +H+IV +SF E GLL Sbjct: 170 KSVIFAHNHPSGNTQPSRQDIALTKEMKDALRMFDVLLIEHIIVSKHSYFSFLEEGLL 227 >UniRef50_B9XSW5 DNA repair protein RadC n=1 Tax=bacterium Ellin514 RepID=B9XSW5_9BACT Length = 244 Score = 144 bits (364), Expect = 8e-34, Method: Composition-based stats. Identities = 51/141 (36%), Positives = 80/141 (56%), Gaps = 6/141 (4%) Query: 24 RALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINR 83 R + L G + A+ + LR + E E F+V+ L+ + +LI E + GT++ Sbjct: 103 RRMAAELKPEGTVLDNPEAIADLLREENRSYEVENFQVVLLNTRRKLIRVENITQGTLDT 162 Query: 84 TEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLI 143 +HPREV K A+ NA+A++LAHNHPSG+ TPS+AD +T+ L++ QL+ I + DH+I Sbjct: 163 LLIHPREVFKSAISANASAIVLAHNHPSGDPTPSEADIKVTRDLIRAGQLLKIEILDHII 222 Query: 144 VGG------RQIYSFAEHGLL 158 +G + S E G Sbjct: 223 LGRRTNERPKDYASLRELGYF 243 >UniRef50_A3ER13 DNA repair protein (RadC) n=3 Tax=Leptospirillum RepID=A3ER13_9BACT Length = 237 Score = 144 bits (364), Expect = 9e-34, Method: Composition-based stats. Identities = 51/158 (32%), Positives = 79/158 (50%), Gaps = 1/158 (0%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 + LS + Q I+ R + S V + L + ++E F Sbjct: 75 LSSLSGMGLAKAAQIMAGIELGRRVSGKA-RSFRPEIRSARDVYDILGARLRDEKKESFW 133 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 VL LD +++L + G+++ T VHPRE + A+ +AAAV+ HNHPSG+ PS D Sbjct: 134 VLLLDQRHRLQNAVRISEGSLSMTLVHPREAFQPAIRDSAAAVLFVHNHPSGDPEPSSDD 193 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +LT+RL + +L+ IRV DH+++G S E G L Sbjct: 194 WSLTERLKECGELLGIRVLDHVVLGDHAWVSLEERGGL 231 >UniRef50_D2EK65 DNA repair protein n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EK65_PEDAC Length = 225 Score = 144 bits (364), Expect = 9e-34, Method: Composition-based stats. Identities = 47/150 (31%), Positives = 76/150 (50%), Gaps = 5/150 (3%) Query: 13 PQDRRLIQRALRALDRHLHEP----GVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQN 68 P + ++ A+ R +P G S + + +E +L LD +N Sbjct: 74 PAESLALEAAIELGRRVQRQPIHLLGKVLGSAQ-IGNLMVARFQKNPQEHLVLLCLDTKN 132 Query: 69 QLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLV 128 Q+ +F G +N EVHPRE++ L +++ IL HNHPSG PS D T+++ Sbjct: 133 QIKQERVIFKGGLNSAEVHPREIMAEVLRYSSNGFILVHNHPSGNVEPSMNDVAFTKKMK 192 Query: 129 QVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 ++ L+ IR+ DHLIVG + +S AE+ +L Sbjct: 193 KIGDLMGIRLIDHLIVGDQTYWSAAENRVL 222 >UniRef50_A1BHA1 UPF0758 protein Cpha266_1761 n=11 Tax=Chlorobiaceae RepID=Y1761_CHLPD Length = 223 Score = 144 bits (364), Expect = 1e-33, Method: Composition-based stats. Identities = 55/161 (34%), Positives = 90/161 (55%), Gaps = 5/161 (3%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPG---VAFTSTHAVREWLRLHMAALERE 57 + +L + G + ++I A+ L++ +H S V E++ + + +E Sbjct: 64 LSELQEIKGIGQAKAMQII--AVFELNKRIHYSRNLQRKVLSARDVFEYMAGRVPDITKE 121 Query: 58 EFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPS 117 VL+L+ +NQ+I +E + GT+N + HPREV K A+ +A A+IL HNHPSG+ PS Sbjct: 122 HLFVLHLNTKNQIIRNEQVTVGTLNASLAHPREVFKSAIRESAHAIILVHNHPSGDVEPS 181 Query: 118 QADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 AD+ +T+ L Q + I + DH+I+G +SF EH LL Sbjct: 182 NADRQVTEILRQAGSFLQIDLLDHVIIGVDTWFSFREHSLL 222 >UniRef50_C5TNC6 DNA repair protein RadC n=3 Tax=Neisseria RepID=C5TNC6_NEIFL Length = 224 Score = 143 bits (362), Expect = 1e-33, Method: Composition-based stats. Identities = 55/136 (40%), Positives = 76/136 (55%), Gaps = 1/136 (0%) Query: 23 LRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTIN 82 R L L E + ++ +V ++LRLH+ + E L L+ QNQLIA L GT+ Sbjct: 90 RRILGEDLQEQ-IILSNPKSVADYLRLHLGHEKIEVSVALLLNRQNQLIAVRELSRGTVA 148 Query: 83 RTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHL 142 V+ RE+VK AL A ++ILAHNHP PS++D T+RL Q L LVDI + DH Sbjct: 149 ENTVYIREIVKLALDEYADSLILAHNHPGSSARPSESDVQFTERLKQALSLVDITLLDHF 208 Query: 143 IVGGRQIYSFAEHGLL 158 IV ++ S E G + Sbjct: 209 IVTAKETCSLREQGYM 224 >UniRef50_Q8DI83 UPF0758 protein tlr1707 n=31 Tax=Cyanobacteria RepID=Y1707_THEEB Length = 250 Score = 143 bits (362), Expect = 1e-33, Method: Composition-based stats. Identities = 55/156 (35%), Positives = 80/156 (51%), Gaps = 4/156 (2%) Query: 2 KQLSFLPGEMTPQDRRLIQRALRALDRHLH-EPGVA--FTSTHAVREWLRLHMAALEREE 58 ++L +PG + P I A+ R PG S L + E Sbjct: 81 EELMAIPG-VGPAKATTILAAVELGKRVFQSRPGEQTIIDSPALAAAVLAADLMWQATER 139 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 F VL LD +++L+ + GT T HPRE+ + A+ NA+ +I+AHNHPSG +PSQ Sbjct: 140 FAVLLLDVRHRLLGSHVITVGTATETLAHPREIFREAVRRNASRLIIAHNHPSGNLSPSQ 199 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAE 154 AD LT++++Q QL++I V DHLI+G S E Sbjct: 200 ADLDLTKQILQAGQLMEIPVLDHLILGNGDYQSLRE 235 >UniRef50_Q4V1K6 Possible DNA repair protein n=7 Tax=Bacillus cereus group RepID=Q4V1K6_BACCZ Length = 151 Score = 143 bits (361), Expect = 2e-33, Method: Composition-based stats. Identities = 39/138 (28%), Positives = 70/138 (50%), Gaps = 2/138 (1%) Query: 23 LRALDRHLHEPGVAFTSTHAVREWLRLHMA--ALEREEFRVLYLDNQNQLIAHETLFTGT 80 ++ ++ T + R + + E F V L+ +N++I + G+ Sbjct: 13 VKESNKIYDVERKRITCPDDINILARAVLCIDEMPHEVFGVFNLNTKNEIIGCSIVSQGS 72 Query: 81 INRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPD 140 IN + VHPRE + A+ NAA+++ HNHPSG S D+ +T+RL + +++ I + D Sbjct: 73 INSSVVHPRETFRTAILNNAASIVCFHNHPSGNPDASPEDREVTKRLAECGKILGIELLD 132 Query: 141 HLIVGGRQIYSFAEHGLL 158 H+I+G + S E G + Sbjct: 133 HVIIGEHRFVSLREKGCI 150 >UniRef50_B2KEG6 DNA repair protein RadC n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KEG6_ELUMP Length = 228 Score = 143 bits (361), Expect = 2e-33, Method: Composition-based stats. Identities = 44/150 (29%), Positives = 74/150 (49%) Query: 9 GEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQN 68 G+ T ++++ + + + V + R +A + E F V+YL +N Sbjct: 79 GKETALFLKVVRGVYKKYAFSKLKKADIIRTPEDVANYCRASLAEHKDEVFEVIYLTVRN 138 Query: 69 QLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLV 128 +I E L G I+R + PR+VV+ AL A ++L HNHPSG+ +PS D + T+ + Sbjct: 139 TVIGTEVLSVGAIDRASISPRKVVEGALKAKAVGIVLVHNHPSGDPSPSMEDISFTKEVA 198 Query: 129 QVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 Q +++ I V DH+IV YS + Sbjct: 199 QAARILGIMVHDHIIVVRGGYYSMRAKSQI 228 >UniRef50_A5VEU8 DNA repair protein RadC n=4 Tax=Sphingomonadales RepID=A5VEU8_SPHWW Length = 230 Score = 143 bits (361), Expect = 2e-33, Method: Composition-based stats. Identities = 46/145 (31%), Positives = 82/145 (56%) Query: 14 QDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAH 73 ++ + + L R + + A+ ++LR MA E RVL+L+++N L+ Sbjct: 86 AALKIAEASALRLLRSKVQDRPILSDWQALADYLRADMAHRAVERVRVLHLNSKNVLVRD 145 Query: 74 ETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQL 133 E + G++++ V+ RE+++RAL +AA+I+ HNHPSG+ PS+ D LT+ L+ + Sbjct: 146 ELVSEGSVDQAAVYVREIIRRALELGSAALIIVHNHPSGDPQPSRQDVELTRELIAAAKP 205 Query: 134 VDIRVPDHLIVGGRQIYSFAEHGLL 158 + I + DH++VG R S GL+ Sbjct: 206 LGIAIHDHVVVGTRGQASLRALGLI 230 >UniRef50_UPI000196B4AA hypothetical protein CATMIT_00107 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B4AA Length = 226 Score = 142 bits (360), Expect = 2e-33, Method: Composition-based stats. Identities = 47/121 (38%), Positives = 75/121 (61%) Query: 35 VAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKR 94 + + V L M+ L +E F ++ LDN N+LIA +TLF G++N + V RE+ + Sbjct: 99 EVYDNPTKVFYHLETKMSHLSQEHFLIMILDNHNRLIAEKTLFIGSVNMSIVSAREIFRE 158 Query: 95 ALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAE 154 AL FN ++I HNHPSG+ PS D ++TQ+LV + +++++ + DH+I+G Q YSF Sbjct: 159 ALAFNGVSIICVHNHPSGDAHPSSEDISMTQKLVDLGKMMNVDIVDHIIIGRNQYYSFKA 218 Query: 155 H 155 Sbjct: 219 E 219 >UniRef50_A6DS55 DNA repair protein RadC n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DS55_9BACT Length = 235 Score = 142 bits (360), Expect = 2e-33, Method: Composition-based stats. Identities = 49/156 (31%), Positives = 79/156 (50%), Gaps = 6/156 (3%) Query: 9 GEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQN 68 G R + R L + +L +A +EEF +L LD +N Sbjct: 78 GPAKATSLRAVFALARKLVAEEAMEQFTIHRPESAAPYLIQLLAGKSKEEFHILLLDTKN 137 Query: 69 QLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLV 128 +L+ + G ++R+ VHPREV + AL + A +ILAHNHPSG+ +PS D T+ L+ Sbjct: 138 RLMRSSQISIGLLDRSHVHPREVFREALRYGTAKIILAHNHPSGDPSPSPQDIECTKNLI 197 Query: 129 QVLQLVDIRVPDHLIVGGR------QIYSFAEHGLL 158 + +++ ++V DHLI+G + Q S + GL+ Sbjct: 198 EAGEILGVKVVDHLIIGHKLPGDSRQFVSLRQLGLV 233 >UniRef50_Q93MC6 DNA repair protein RadC n=1 Tax=Clostridium perfringens RepID=Q93MC6_CLOPE Length = 145 Score = 142 bits (360), Expect = 3e-33, Method: Composition-based stats. Identities = 45/140 (32%), Positives = 77/140 (55%) Query: 19 IQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFT 78 + + ++ L V E ++ + ++RE V+ LD +N++ + Sbjct: 6 VVKVYVKKEQSLQIEKDIIKKPEQVFEVVKNFLGEVDREYLIVIVLDVKNKINSISVASV 65 Query: 79 GTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRV 138 GT+N + VHPREV K A+ N A++ILAHNHPSG+T+PS+ D +T R+ + L+ I + Sbjct: 66 GTLNSSIVHPREVFKTAILANGASIILAHNHPSGDTSPSKDDINITTRIKECGVLMGIEL 125 Query: 139 PDHLIVGGRQIYSFAEHGLL 158 DH+I+G + S G++ Sbjct: 126 LDHVILGDEKFISLKNEGII 145 >UniRef50_C4ZA49 DNA repair protein RadC n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZA49_EUBR3 Length = 229 Score = 142 bits (360), Expect = 3e-33, Method: Composition-based stats. Identities = 39/159 (24%), Positives = 80/159 (50%), Gaps = 2/159 (1%) Query: 2 KQLSFLPG--EMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEF 59 ++L +PG ++ + I + + + + + ++ M L E Sbjct: 71 EELLSIPGIGQIKAIQLKAIAELSLRIAKTKKVQSIRMNNPQTIADYYMEQMRHLTNEVV 130 Query: 60 RVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQA 119 Y D +++ + + + G+++ + V +++ AL NA+ ++L HNHPSG+ TPS+ Sbjct: 131 ICAYFDVKSRFLGDKFISKGSLSSSVVDIGSIIRTALDKNASKLVLLHNHPSGDCTPSRN 190 Query: 120 DKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D +T RL++ + I + DH+I+G + YSF E+ L+ Sbjct: 191 DIAVTDRLIEGSGIFSIELCDHIIIGDNEYYSFYENKLI 229 >UniRef50_B9QT39 DNA repair protein RadC n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QT39_9RHOB Length = 228 Score = 142 bits (359), Expect = 3e-33, Method: Composition-based stats. Identities = 51/150 (34%), Positives = 83/150 (55%) Query: 9 GEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQN 68 G + I++ + R V ++++ M LE E+FR L+L+ ++ Sbjct: 79 GPVLADTLSAIRQCIVRSARAEITERRVLDCWSEVIDYIQATMGYLEIEQFRCLFLNKKH 138 Query: 69 QLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLV 128 +IA E + GT++ T V+PRE+++RAL A+A+IL HNHPSG+ TPS+ D +T +LV Sbjct: 139 GVIADEVMQEGTVDHTPVYPRELMRRALILQASALILVHNHPSGDPTPSRPDIEMTAQLV 198 Query: 129 QVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 + + + I + DH+IV SF LL Sbjct: 199 DIAKPLGIEINDHIIVARGLAVSFKGMNLL 228 >UniRef50_Q3JV52 UPF0758 protein BURPS1710b_1139 n=75 Tax=Proteobacteria RepID=Y1139_BURP1 Length = 278 Score = 142 bits (359), Expect = 3e-33, Method: Composition-based stats. Identities = 64/157 (40%), Positives = 92/157 (58%), Gaps = 1/157 (0%) Query: 2 KQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRV 61 K L + T +++ A RAL E + S AV ++LRL + RE F Sbjct: 123 KGLRGIGPARTAILVAVVELARRALAEKARERPLV-DSPGAVDDYLRLLIGTRPREVFVC 181 Query: 62 LYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADK 121 L+LD +++L+ E G++ R V+PRE+V+RAL NAAA+I+AHNHPSG PS AD+ Sbjct: 182 LFLDARHRLVQTEETAHGSLTRMAVYPREIVRRALALNAAALIVAHNHPSGAVRPSAADR 241 Query: 122 TLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 LT+ L L LVDI++ DH +VG +SFA+ G + Sbjct: 242 RLTRVLRDALALVDIKLIDHFVVGASDTFSFAQAGWI 278 >UniRef50_A8RIH3 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8RIH3_9CLOT Length = 178 Score = 142 bits (359), Expect = 3e-33, Method: Composition-based stats. Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 1/123 (0%) Query: 37 FTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRAL 96 FT E + +RE VL L+ + + A E G +N + R++ K A+ Sbjct: 48 FTDPGMAAEMVWPLFEMADREMALVLSLNTKLEPQALEIAAVGGLNACSIDCRDIFKHAV 107 Query: 97 HFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGR-QIYSFAEH 155 NAA +I HNHPSG+ PS D+ LT+RL + +++ I + DH+IVG YSF E Sbjct: 108 LNNAAFIICFHNHPSGDPKPSMEDRKLTKRLEECGKILGIPLIDHIIVGEGPCCYSFKEQ 167 Query: 156 GLL 158 G+L Sbjct: 168 GML 170 >UniRef50_C9LCX8 DNA repair protein RadC n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LCX8_9BACT Length = 228 Score = 142 bits (359), Expect = 4e-33, Method: Composition-based stats. Identities = 51/161 (31%), Positives = 77/161 (47%), Gaps = 4/161 (2%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVA---FTSTHAVREWLRLHMAALERE 57 ++ L G + P I A R EP + + R + E Sbjct: 68 IQSLCRYAG-IGPAKAITILAACELGRRRAEEPAEQRPLMDGPQKIYSFFRQRLEDTPHE 126 Query: 58 EFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPS 117 EF ++L+ + QL++ + G + T V R + +AL A A+ + HNHPSG PS Sbjct: 127 EFHAMFLNRRLQLVSEALIGRGGLTETTVDVRLLFGKALEAKATALAICHNHPSGNPRPS 186 Query: 118 QADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 QAD LTQ++ Q +L+DIR+ DH+IV + YS+ E G L Sbjct: 187 QADDRLTQKVAQAARLLDIRLVDHIIVADKCYYSYQEEGKL 227 >UniRef50_O67541 UPF0758 protein aq_1610 n=2 Tax=Aquificaceae RepID=Y1610_AQUAE Length = 231 Score = 142 bits (358), Expect = 4e-33, Method: Composition-based stats. Identities = 44/145 (30%), Positives = 76/145 (52%), Gaps = 3/145 (2%) Query: 16 RRLIQRALRALDRHLH--EPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAH 73 + L +AL L + + ++ + E+L+ RE LYLD N+L+ Sbjct: 88 KALQVKALVELSKRFKGGKSRISIRNPQEAFEFLKDKF-DERRESLIALYLDLSNRLLDW 146 Query: 74 ETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQL 133 E + G +N P++++ +A+ +A +I+AHNHP GE +PS D T+RL + +L Sbjct: 147 EVVAIGNVNTVFSKPKDILFKAVKLSANGIIIAHNHPQGEPSPSNEDLNFTERLKKACEL 206 Query: 134 VDIRVPDHLIVGGRQIYSFAEHGLL 158 + + DHLI+ + +SF E G+L Sbjct: 207 LGFELLDHLILSEGRYFSFREEGVL 231 >UniRef50_D1W0Q6 Putative DNA repair protein RadC n=2 Tax=Prevotella RepID=D1W0Q6_9BACT Length = 259 Score = 141 bits (357), Expect = 5e-33, Method: Composition-based stats. Identities = 48/159 (30%), Positives = 78/159 (49%), Gaps = 4/159 (2%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRH---LHEPGVAFTSTHAVREWLRLHMAALERE 57 +++L+ G + P I A R E +S A+ E++ M L+ E Sbjct: 99 IQELTNYKG-IGPAKAITILAACELGKRRAMEKAEERADLSSALAIYEYMHPRMQDLDVE 157 Query: 58 EFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPS 117 E +L ++ + +LI + G I+ T V R +++ A+ NA + L HNHPS + PS Sbjct: 158 EAWILLMNQRYKLIKAMRISHGGISETAVDVRVIMREAVLSNATVLALCHNHPSNQAFPS 217 Query: 118 QADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHG 156 D LT+R+ + QL+ I DH+IV + YS+ E G Sbjct: 218 TEDDRLTKRIHEASQLMRIYFLDHIIVTDGRYYSYREEG 256 >UniRef50_C0QCU0 RadC2 n=2 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QCU0_DESAH Length = 187 Score = 141 bits (357), Expect = 6e-33, Method: Composition-based stats. Identities = 47/145 (32%), Positives = 84/145 (57%), Gaps = 5/145 (3%) Query: 19 IQRALRALDRHLHEPGVAFTSTHAVREWLRLHM---AALEREEFRVLYLDNQNQLIAHET 75 + R D+ + + + ++ ++ + +RE+F +L L+ +N++I Sbjct: 35 VYRVSLVRDKGIKFGRESLSGPKQAQKIMKSLIEMQGQPDREQFCILMLNAKNKIIGLNI 94 Query: 76 LFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVD 135 + TG+++ VHPREV+K A+ N++A+IL HNHPSG TPS D +T+R++Q ++ Sbjct: 95 VSTGSLSSATVHPREVLKPAILANSSAMILCHNHPSGTLTPSPEDIAITKRIIQASDIMG 154 Query: 136 IRVPDHLIVG--GRQIYSFAEHGLL 158 I V +HLI+ YSF+E+GL+ Sbjct: 155 ITVHEHLIINMDDDSFYSFSENGLI 179 >UniRef50_Q6AQC9 Related to DNA repair protein RadC n=4 Tax=Deltaproteobacteria RepID=Q6AQC9_DESPS Length = 249 Score = 141 bits (357), Expect = 6e-33, Method: Composition-based stats. Identities = 53/137 (38%), Positives = 81/137 (59%), Gaps = 2/137 (1%) Query: 22 ALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTI 81 A R L L E S+ V E+L M L++E F V++LD+ + +I E + G++ Sbjct: 98 AARYLQLRL-EGKSYLHSSTEVVEYLSYRMRGLKKEVFCVVFLDSSHGIICSEIIAEGSL 156 Query: 82 NRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDH 141 VHPRE++ +AL +AAA+I++HNHPSG PS D LT+ L + + I++ DH Sbjct: 157 TVNTVHPRELLVKALEHHAAALIISHNHPSGALLPSPQDIQLTRLLYFLCSSMQIQLLDH 216 Query: 142 LIVGGRQIYSFAEHGLL 158 +I+G SFA+HGL+ Sbjct: 217 IIIGDGAY-SFADHGLM 232 >UniRef50_C3WLA1 DNA repair protein radC n=2 Tax=Fusobacterium RepID=C3WLA1_9FUSO Length = 242 Score = 141 bits (356), Expect = 7e-33, Method: Composition-based stats. Identities = 51/164 (31%), Positives = 89/164 (54%), Gaps = 7/164 (4%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDR------HLHEPGVAFTSTHAVREWLRLHMAAL 54 +K+L + G + P LI+ L + T A+ ++LR + Sbjct: 80 IKELEKIKG-IGPISAILIKFVGELLTELYGENLKIETKADKITDKEALLKFLRNKIGYE 138 Query: 55 EREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGET 114 + E+F V+YL + N++IA E +GT++R+ ++PRE+ KR + NA ++I+AHNHPSG T Sbjct: 139 DVEKFYVIYLSSSNEVIAFEESSSGTLDRSSIYPREIYKRVIMENAKSIIIAHNHPSGNT 198 Query: 115 TPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 PS+ D +T + + L+ + +H+I+ +SF E GL+ Sbjct: 199 CPSKCDIDITNEIAKGLKNFGALLLEHIIITRDSYFSFLEEGLI 242 >UniRef50_A0L491 DNA repair protein RadC n=4 Tax=Bacteria RepID=A0L491_MAGSM Length = 241 Score = 141 bits (356), Expect = 7e-33, Method: Composition-based stats. Identities = 56/151 (37%), Positives = 77/151 (50%), Gaps = 1/151 (0%) Query: 9 GEMTPQDRRLIQRALRALDRHLH-EPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQ 67 GE ++ R VR++L MA E F VL LD Q Sbjct: 85 GETAALFITMLPALTRRYQHDAATRNKTPLNRADNVRDYLVPLMAGRTEEVFYVLCLDAQ 144 Query: 68 NQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRL 127 +L+ + GTI + VHPR+VV+ + AA VILAHNHPSG SQ D LT L Sbjct: 145 CRLLFPALVTEGTIRQAHVHPRQVVELVIRHKAAHVILAHNHPSGNPKASQDDILLTSHL 204 Query: 128 VQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +Q L +D++V DHLI+ G +++SFA G++ Sbjct: 205 MQALNPIDVQVLDHLIIAGEKVFSFASAGMM 235 >UniRef50_Q2GEH3 DNA repair protein RadC n=2 Tax=Neorickettsia RepID=Q2GEH3_NEOSM Length = 236 Score = 141 bits (356), Expect = 7e-33, Method: Composition-based stats. Identities = 48/142 (33%), Positives = 79/142 (55%) Query: 17 RLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETL 76 R ++ +++A+ R S +V ++LRL + E RVL+L+ + LI Sbjct: 95 RTVRESMKAILRKDLTSRTTLKSWKSVVDYLRLSIGNKPVETIRVLFLNKKYTLIREYVQ 154 Query: 77 FTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDI 136 G + T + RE++K+ L A+A+++AHNHPSG PSQ D +T +L ++ Q VD+ Sbjct: 155 ELGAADHTPLCMREIIKKCLTCGASAMVIAHNHPSGNPLPSQEDLLITGKLKKICQKVDV 214 Query: 137 RVPDHLIVGGRQIYSFAEHGLL 158 ++ DH IV +SF +GLL Sbjct: 215 QLVDHFIVTPHDHFSFVVNGLL 236 >UniRef50_A8ZUS2 DNA repair protein RadC n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZUS2_DESOH Length = 253 Score = 141 bits (356), Expect = 7e-33, Method: Composition-based stats. Identities = 53/143 (37%), Positives = 86/143 (60%), Gaps = 1/143 (0%) Query: 16 RRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHET 75 R + A R L++ L + ++ + +L + RE F +++D +N++I ET Sbjct: 87 RLVKAVADRCLEKELVGRPL-LANSTDLLNYLNHTLRDRHRETFAAIFMDAKNRVIVVET 145 Query: 76 LFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVD 135 L G++ + V+PREVV RAL +AAA+I HNHPSGE PS+ D +T++LV + + Sbjct: 146 LSEGSLTESPVYPREVVARALAHHAAALICCHNHPSGEPEPSRQDIAITRKLVMACKTMG 205 Query: 136 IRVPDHLIVGGRQIYSFAEHGLL 158 I V +H+IVG R +SFA++G + Sbjct: 206 ITVHEHIIVGERGHFSFADNGYM 228 >UniRef50_Q8RF15 UPF0758 protein FN0909 n=11 Tax=Fusobacterium RepID=Y909_FUSNN Length = 232 Score = 141 bits (356), Expect = 7e-33, Method: Composition-based stats. Identities = 43/132 (32%), Positives = 79/132 (59%) Query: 27 DRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEV 86 + + + + ++ + ++LR + E E+F V+YL + N++I E GT++R+ V Sbjct: 101 KKLIDKETLKISNKDILLKYLRNKIGYEEIEKFYVIYLSSSNEVIEFEENSVGTLDRSSV 160 Query: 87 HPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGG 146 +PRE+ K+ ++ NA ++ILAHNHPS TPS++D LT + + L+ + +H+I+ Sbjct: 161 YPREIYKKVINLNAKSIILAHNHPSDNITPSKSDIELTNEIAKGLKNFGALLIEHIIITK 220 Query: 147 RQIYSFAEHGLL 158 +SF E GL+ Sbjct: 221 NSYFSFLEEGLI 232 >UniRef50_B4RM65 UPF0758 protein NGK_1225 n=25 Tax=Neisseriaceae RepID=Y1225_NEIG2 Length = 225 Score = 141 bits (356), Expect = 8e-33, Method: Composition-based stats. Identities = 50/141 (35%), Positives = 77/141 (54%) Query: 18 LIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLF 77 +++ R + + + + V ++LR H+ + E L L+ QNQLIA L Sbjct: 84 VVREIGRRILEEELQEEITLSDPDTVADYLRFHLGQEKVEVSVALLLNRQNQLIAVRELS 143 Query: 78 TGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIR 137 GT+ ++ RE+VK AL A ++I+AHNHP G PSQ D T+RL Q + LVD+ Sbjct: 144 RGTVAENTIYIREIVKLALDEYADSLIIAHNHPGGSPEPSQEDIMFTRRLAQAMSLVDVS 203 Query: 138 VPDHLIVGGRQIYSFAEHGLL 158 + DH IV + + SF + GL+ Sbjct: 204 LLDHFIVTSQTVRSFRQLGLM 224 >UniRef50_Q4EGF4 DNA repair protein RadC n=7 Tax=Bacilli RepID=Q4EGF4_LISMO Length = 147 Score = 141 bits (355), Expect = 1e-32, Method: Composition-based stats. Identities = 47/123 (38%), Positives = 67/123 (54%), Gaps = 1/123 (0%) Query: 37 FTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRAL 96 S + + +RE F V+ L+ +N ++A G++N + VHPREV K A+ Sbjct: 25 IRSPEDGAKIASRFIGRDDREVFFVMCLNTKNNVVAVHRCHVGSLNSSIVHPREVFKSAI 84 Query: 97 HFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIV-GGRQIYSFAEH 155 N A+VILAH HPSG+ PS D +T+RLV+ +L+ I V DHLIV S E Sbjct: 85 LNNVASVILAHQHPSGDIKPSMEDINVTKRLVEAGKLLGIEVLDHLIVNSDNSFTSLKER 144 Query: 156 GLL 158 G + Sbjct: 145 GYI 147 >UniRef50_B8KU95 DNA repair protein RadC n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KU95_9GAMM Length = 223 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 59/124 (47%), Positives = 74/124 (59%) Query: 33 PGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVV 92 S R +L+ + RE F LYLD++N+LI E LF GTI+ V PREVV Sbjct: 98 QRDLIASAVECRRFLQRRLGKQRREVFSALYLDSRNRLIVAEDLFAGTIDGAAVFPREVV 157 Query: 93 KRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSF 152 + AL +AA+VI+AHNHPSG PS+ D+ LT+RL L LVDIR+ DH IVG S Sbjct: 158 RGALLHDAASVIVAHNHPSGALAPSEQDRQLTRRLSSALSLVDIRLLDHFIVGFGDSVSL 217 Query: 153 AEHG 156 A G Sbjct: 218 ASLG 221 >UniRef50_B0MUL4 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MUL4_9BACT Length = 214 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 50/149 (33%), Positives = 77/149 (51%), Gaps = 1/149 (0%) Query: 10 EMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQ 69 + + + ++ R L P S++ V R + ++ EE LYL+ N+ Sbjct: 66 KRAARIQAAVELGRRVLAARELGP-DPIGSSNDVVRIFRPLLTEMKHEECWCLYLNTGNR 124 Query: 70 LIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQ 129 ++ + + G + T V R V+KRAL A +IL HNHPSG PS+ DK LT+++ + Sbjct: 125 IVERQRVSQGGVQATVVDHRLVIKRALELLATQIILVHNHPSGAALPSEQDKILTKKIAE 184 Query: 130 VLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 L DIR+ DHLI+ YSF + GLL Sbjct: 185 AAALFDIRLLDHLIIARGGEYSFRQSGLL 213 >UniRef50_B8FHA4 DNA repair protein RadC n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FHA4_DESAA Length = 265 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 51/125 (40%), Positives = 77/125 (61%), Gaps = 1/125 (0%) Query: 35 VAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKR 94 A +S+ + L + E F ++YLD QN+++ ET F G++N + V+ RE++ + Sbjct: 126 EAVSSSEELYNLLNFQFENKKNECFFIVYLDVQNRILNMETPFEGSLNASHVYTRELIDK 185 Query: 95 ALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGG-RQIYSFA 153 AL A+AV+LAHNHPSG T PS+ D LT L + V+I + +HLI+G + YSFA Sbjct: 186 ALKTGASAVLLAHNHPSGNTKPSKNDIQLTYTLFTAFRSVEIHLLEHLIIGKQGEYYSFA 245 Query: 154 EHGLL 158 +HG L Sbjct: 246 DHGYL 250 >UniRef50_C0GR82 DNA repair protein RadC n=2 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GR82_9DELT Length = 145 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 46/144 (31%), Positives = 78/144 (54%), Gaps = 1/144 (0%) Query: 15 DRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHE 74 +R + L L P +S A L + E F VL++DN+N++I + Sbjct: 3 EREKAKTLLDQLYAMESSPDYVLSSPEAAVIQLLP-FRKKKTENFVVLFVDNKNRMICKK 61 Query: 75 TLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLV 134 + GT+++ V PRE+++ A+ A+ +IL HNHP G + PS+ D+ LT ++ ++ + Sbjct: 62 VVAKGTVDQIPVFPREIIRHAILKQASGIILGHNHPGGASEPSKQDRELTSKIKRIAMEL 121 Query: 135 DIRVPDHLIVGGRQIYSFAEHGLL 158 IRV DH+I+ +SF E+G L Sbjct: 122 GIRVLDHIIICDSGHFSFQENGYL 145 >UniRef50_C1A4H3 DNA repair protein RadC n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A4H3_GEMAT Length = 244 Score = 140 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 56/135 (41%), Positives = 75/135 (55%) Query: 24 RALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINR 83 R + E G+ V + EEF V LD Q++L + G +N Sbjct: 110 RRMAGEAREAGLPLRGPRDVAAAFAPRLQDAPVEEFHVAILDAQHRLERDVLITRGLLNS 169 Query: 84 TEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLI 143 + VHPREV + A+ AAAVIL HNHPSG+ TPS D+ +T++LV +L+DI V DH+I Sbjct: 170 SLVHPREVFREAIAERAAAVILVHNHPSGDPTPSAEDRAVTEQLVAAGRLLDIPVHDHII 229 Query: 144 VGGRQIYSFAEHGLL 158 VG + SFAE GLL Sbjct: 230 VGRGRYVSFAEAGLL 244 >UniRef50_Q0GNI5 Smu18B n=1 Tax=uncultured organism RepID=Q0GNI5_9ZZZZ Length = 154 Score = 140 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 56/146 (38%), Positives = 84/146 (57%) Query: 13 PQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIA 72 P R+++ A +R + + S L +A E E F V+ L+ Q+++IA Sbjct: 9 PAWCRIVRERPEAFEREVLAENLHVRSPRDAVVALAPRLAREEVEVFLVIALNAQHRMIA 68 Query: 73 HETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQ 132 + + G N + VHPREV + A+ AAA+I+AHNHPSG+ PS D+ +T++LV + Sbjct: 69 LQEVTRGIQNCSLVHPREVFRIAIAIGAAAIIVAHNHPSGDPAPSADDRAVTEQLVAAGR 128 Query: 133 LVDIRVPDHLIVGGRQIYSFAEHGLL 158 L+D+ V DH+IVG SFAE GLL Sbjct: 129 LLDLPVHDHIIVGAGSYTSFAEAGLL 154 >UniRef50_Q4FQM6 UPF0758 protein Psyc_1834 n=3 Tax=Moraxellaceae RepID=Y1834_PSYA2 Length = 227 Score = 140 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 56/167 (33%), Positives = 84/167 (50%), Gaps = 10/167 (5%) Query: 1 MKQLSFLPGE-------MTPQDRRLIQRALRALDRHLH---EPGVAFTSTHAVREWLRLH 50 + +L P E + P I +L R+L + G + V++++ H Sbjct: 57 LAELLAAPQETVLACHGIGPAKYAQILASLEIGRRYLDSQLKTGQGLGRSQMVKDYISTH 116 Query: 51 MAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHP 110 + RE F VL LDN LI E LFTG I+ V + V++ AL + +I+AHNHP Sbjct: 117 LRGEPREVFAVLCLDNALNLINFEILFTGGISSCSVCIKHVLRHALSHATSQLIIAHNHP 176 Query: 111 SGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGL 157 + TPS AD LT L + L+D+ + DH+IVG + S+AE+ L Sbjct: 177 HTDATPSTADNLLTYELKKACDLIDLSLIDHVIVGRNETLSYAENCL 223 >UniRef50_Q7MVX9 UPF0758 protein PG_0894 n=24 Tax=Bacteroidales RepID=Y894_PORGI Length = 227 Score = 140 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 50/162 (30%), Positives = 82/162 (50%), Gaps = 4/162 (2%) Query: 1 MKQLSFLPGEMTPQDRRLIQRAL---RALDRHLHEPGVAFTSTHAVREWLRLHMAALERE 57 +++L+ M P + A+ R + + T + + + L +E Sbjct: 66 IQELTGSFRGMGPAKAVTVMAAMELSRRIPSQEMPRRESITDSRMAYRTISPFLTDLPQE 125 Query: 58 EFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPS 117 E VL L+ ++I+ E L G ++ T R ++ +A+ A+A+ILAHNHPSG PS Sbjct: 126 EMWVLLLNQSGKIISMENLSRGGVSETSADVRLIMHKAVSHLASAIILAHNHPSGTVRPS 185 Query: 118 QADKTLTQRLVQVLQLVDIRVPDHLIVGGRQ-IYSFAEHGLL 158 + D LTQR+ + L+ R+ DHLI+G +SFA+ GLL Sbjct: 186 EQDIQLTQRVQKAATLLGFRLNDHLIIGDDGAYFSFADEGLL 227 >UniRef50_A6GHT1 DNA repair protein RadC n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GHT1_9DELT Length = 260 Score = 140 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 47/135 (34%), Positives = 70/135 (51%) Query: 24 RALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINR 83 R LDR +LR + ERE F ++ LD + +++ T+ G++ R Sbjct: 110 RRLDRLDLPMRRPLRHPREAERFLRSLLGDAEREHFMIIGLDARQRVLLVRTIAVGSLTR 169 Query: 84 TEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLI 143 EVHPREV + + A +L HNHPSG+ PS+AD LT R+ + + + I V DH++ Sbjct: 170 VEVHPREVFRPLVRAGAHTCLLVHNHPSGDARPSEADIELTARMTDIGRFLGIPVLDHVV 229 Query: 144 VGGRQIYSFAEHGLL 158 V S AE GL+ Sbjct: 230 VSANGFVSLAELGLV 244 >UniRef50_A1BGW3 DNA repair protein RadC n=2 Tax=Chlorobium RepID=A1BGW3_CHLPD Length = 166 Score = 140 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 41/109 (37%), Positives = 64/109 (58%), Gaps = 1/109 (0%) Query: 51 MAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHP 110 + L EE V +L +N + + + GT+N + +HPREV + A+ NA A+IL HNHP Sbjct: 57 LPDLPHEELHVFFLSTKNYITGTQLVSRGTLNASLIHPREVFRGAILANANAIILVHNHP 116 Query: 111 SGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQ-IYSFAEHGLL 158 SG PS ADK +T+++ ++ I + DH+I+G +SF + GL Sbjct: 117 SGNPEPSNADKQVTKQIRSSADIIGIELLDHVIIGSNGNHFSFRQEGLF 165 >UniRef50_C5NXB5 DNA repair protein RadC homolog n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXB5_9BACL Length = 257 Score = 139 bits (352), Expect = 2e-32, Method: Composition-based stats. Identities = 43/135 (31%), Positives = 77/135 (57%), Gaps = 2/135 (1%) Query: 19 IQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFT 78 I+ A R ++ + V S ++ +L+ + L +E F VL +D + ++I +F Sbjct: 89 IEFARRIYATNVLD--VKCDSPQSIANYLKSSLENLTQEVFVVLDIDTKGKIIEKREVFK 146 Query: 79 GTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRV 138 G+++ + VHPREV K A+ +A++++ HNHPSG+ TPS D T L++V ++V I + Sbjct: 147 GSLSMSVVHPREVFKLAIKNSASSIVCVHNHPSGDATPSIEDIKTTINLMEVGEIVGIEM 206 Query: 139 PDHLIVGGRQIYSFA 153 DH++V + S Sbjct: 207 LDHIVVAKKGYVSIR 221 >UniRef50_C7TC16 DNA repair protein n=8 Tax=Lactobacillus RepID=C7TC16_LACRG Length = 222 Score = 139 bits (351), Expect = 2e-32, Method: Composition-based stats. Identities = 44/146 (30%), Positives = 73/146 (50%), Gaps = 3/146 (2%) Query: 11 MTPQDRRLIQRALRALDRHLHEPGV---AFTSTHAVREWLRLHMAALEREEFRVLYLDNQ 67 + R I + R + V ++ + + + A +E +L+LD + Sbjct: 70 LGAAKRASILAGVELGRRVMRRQSVRYGQIKNSEQLGKTMVSRFAGANQESMLILFLDVK 129 Query: 68 NQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRL 127 NQ+I + + GT++ PR V + AL +A +I+ HNHPSG+ +PSQAD+ T R Sbjct: 130 NQIITEQIVAIGTVDSALADPRVVFREALKLSATNLIMVHNHPSGDPSPSQADRDTTTRF 189 Query: 128 VQVLQLVDIRVPDHLIVGGRQIYSFA 153 L+ + + DHLI+G + YSFA Sbjct: 190 QLAAALLGMHLLDHLIIGRQSYYSFA 215 >UniRef50_UPI00016C0069 DNA repair protein RadC n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0069 Length = 225 Score = 139 bits (351), Expect = 3e-32, Method: Composition-based stats. Identities = 46/147 (31%), Positives = 75/147 (51%), Gaps = 4/147 (2%) Query: 16 RRLIQRALRALDRHLHEPG----VAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLI 71 + + A+ + + LH P + + V +E F LYLD++ LI Sbjct: 72 KAIQLVAIVEIAKRLHVPKPMQLIDLKNPEDVAGLFVEEFENKFQEMFYALYLDSKLGLI 131 Query: 72 AHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVL 131 + GT+N T VH R+V + A+ A ++I+ HNHPSG+ PS+ D T+T+ L V Sbjct: 132 KKHCISIGTLNMTIVHARDVFRPAIEVCANSLIVVHNHPSGDPEPSKQDITITRDLQFVG 191 Query: 132 QLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +++ I + DH+IVG S + G+L Sbjct: 192 EVIKIPLLDHVIVGDGDFRSLRQMGIL 218 >UniRef50_B6AT60 DNA repair protein RadC n=1 Tax=Rhodobacterales bacterium HTCC2083 RepID=B6AT60_9RHOB Length = 253 Score = 139 bits (351), Expect = 3e-32, Method: Composition-based stats. Identities = 63/156 (40%), Positives = 90/156 (57%) Query: 3 QLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVL 62 +L L G QD +L+ A + + + +S AV + R +A E EEF VL Sbjct: 98 RLEALIGVSATQDLKLVFGASKRMAKARIAHRPLISSWDAVLTYCRTSLAHKETEEFHVL 157 Query: 63 YLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKT 122 +L+ +N LIA ETL GT++ V+PREV+KRAL N+ A+IL HNHPSG+ +PS +D Sbjct: 158 FLNRRNMLIADETLGVGTVDHVPVYPREVLKRALELNSCAIILVHNHPSGDPSPSSSDIE 217 Query: 123 LTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +T+ + Q + I + DHLI+G SF GLL Sbjct: 218 MTKLIKQAADSLSITLHDHLIIGATGETSFVSEGLL 253 >UniRef50_A4XMN4 DNA repair protein RadC n=2 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XMN4_CALS8 Length = 163 Score = 139 bits (351), Expect = 3e-32, Method: Composition-based stats. Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 4/161 (2%) Query: 2 KQLSFLPGEMTPQDRRLIQRALRA--LDRHLHEPGVAFTSTHAVREWLRLHMAA--LERE 57 QLSF ++ + R I + R + + ++L+ H+ E Sbjct: 3 NQLSFFDRKVYAPEPRCIAQKYRISLIKEESFAYNFQLANVRLAVDFLKKHLKLHLEPEE 62 Query: 58 EFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPS 117 VL LD Q L A + GT++ + RE+ KR L N ++I+AHNHP G PS Sbjct: 63 VLVVLCLDVQLNLNAIFEVSRGTLDMAPANTREIFKRVLLTNCHSIIIAHNHPGGSAKPS 122 Query: 118 QADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D T+++ + QL+DIR+ DH+IV YSF++ G+L Sbjct: 123 MDDIKTTEKIKEAAQLLDIRLNDHIIVTEEDYYSFSQAGIL 163 >UniRef50_C1SJ65 DNA repair protein radc n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SJ65_9BACT Length = 221 Score = 139 bits (350), Expect = 3e-32, Method: Composition-based stats. Identities = 48/135 (35%), Positives = 77/135 (57%) Query: 24 RALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINR 83 R + V ++L+ +A ++E F L+LD +L+ E LF GT++R Sbjct: 87 RLGYEDIDREAVIIDKPEKAAQFLKYKIAYDKKEHFVALFLDVNKKLLGFENLFKGTVDR 146 Query: 84 TEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLI 143 V+PRE+ +RA+ A VI+AHNHPSG +PS+ D TLT +L++ L +DI + DH+I Sbjct: 147 LAVYPREIAERAITSKATHVIVAHNHPSGNMSPSETDITLTDKLIKALAALDINLADHII 206 Query: 144 VGGRQIYSFAEHGLL 158 + + YSF ++ Sbjct: 207 ITTKGFYSFKREQVI 221 >UniRef50_Q2QJL1 DNA repair protein RadC n=1 Tax=Acetobacter aceti RepID=Q2QJL1_ACEAC Length = 147 Score = 139 bits (350), Expect = 3e-32, Method: Composition-based stats. Identities = 49/141 (34%), Positives = 82/141 (58%) Query: 18 LIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLF 77 L++ + + R + + +LR M +RE+ RVL+L++Q+QL+A + + Sbjct: 7 LVRESGLRIQRARLQHSGILAEQQQLYAYLRAIMGPEKREQVRVLFLNDQHQLLADDIMG 66 Query: 78 TGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIR 137 GT++ T V+PRE+V RAL A ++L HNHPSG+ TPS D +T ++ ++++I Sbjct: 67 QGTVDHTPVYPREIVARALQLKATLLVLVHNHPSGDPTPSADDVVMTNQICGAAKIMNIH 126 Query: 138 VPDHLIVGGRQIYSFAEHGLL 158 V DH+IV G ++ E G L Sbjct: 127 VWDHIIVAGEKLLCMREAGFL 147 >UniRef50_Q03EP2 DNA repair protein n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03EP2_PEDPA Length = 219 Score = 139 bits (350), Expect = 4e-32, Method: Composition-based stats. Identities = 47/140 (33%), Positives = 72/140 (51%), Gaps = 1/140 (0%) Query: 19 IQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFT 78 I+ R + +H G S + + + +E VL LD +NQ+ +F Sbjct: 81 IELGRRIQKQPIHLLGKVLGSAQ-LGQMMVSRFQKEPQEHLLVLCLDTKNQIKREIVVFK 139 Query: 79 GTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRV 138 G +N EVHPRE++ L +A + +L HNHPSG PS D T+++ +V L+ IR+ Sbjct: 140 GGLNSAEVHPREIMVEVLRVSANSFVLIHNHPSGNIEPSTNDLAFTKKMKKVGDLMGIRL 199 Query: 139 PDHLIVGGRQIYSFAEHGLL 158 DHLIVG + +S AE + Sbjct: 200 IDHLIVGDQSYWSAAEKRFI 219 >UniRef50_A2RLC4 UPF0758 protein llmg_1515 n=4 Tax=Lactococcus lactis RepID=Y1515_LACLM Length = 227 Score = 138 bits (348), Expect = 6e-32, Method: Composition-based stats. Identities = 51/158 (32%), Positives = 77/158 (48%), Gaps = 7/158 (4%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREW---LRLHMAALERE 57 +K++S + + R +I+ R G +S +E+ L M E+E Sbjct: 69 LKEISGIGQTKAIELRAMIELGKRIQTTTRKRYGQVLSS----KEYGMSLAFEMQNFEQE 124 Query: 58 EFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPS 117 YLD QNQ+I +T+F G N PRE++ A+ + +++AHNHPSG PS Sbjct: 125 HLTATYLDGQNQIIEKKTIFIGAFNHATASPREILYHAVKNLSVGLLVAHNHPSGNLQPS 184 Query: 118 QADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEH 155 QADK T+++ + I DH+IVG YSF E Sbjct: 185 QADKIFTKKIKNACDNIGINFIDHIIVGAGNYYSFRER 222 >UniRef50_Q6MAB0 UPF0758 protein pc1765 n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Y1765_PARUW Length = 231 Score = 138 bits (348), Expect = 7e-32, Method: Composition-based stats. Identities = 44/131 (33%), Positives = 71/131 (54%) Query: 28 RHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVH 87 R + + + ++ + RE F ++ D + LI +E + G++++T VH Sbjct: 99 RQQIKSRYLIEHSSHAYQLVKDELENENREIFMAIFQDTKGYLITYEVISIGSLSQTLVH 158 Query: 88 PREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGR 147 PREV A+ AA++I+ HNHPSG+ PS D LTQ L++ +L+ I + DHLI+G Sbjct: 159 PREVFYSAIRHKAASLIVVHNHPSGDPMPSNQDLKLTQILLEGSRLLGIPLRDHLIIGKN 218 Query: 148 QIYSFAEHGLL 158 SF + LL Sbjct: 219 SYVSFKDQNLL 229 >UniRef50_A8ZYJ4 DNA repair protein RadC n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZYJ4_DESOH Length = 167 Score = 137 bits (347), Expect = 7e-32, Method: Composition-based stats. Identities = 46/127 (36%), Positives = 79/127 (62%), Gaps = 2/127 (1%) Query: 33 PGVAFTSTHAVREWLRLHMA-ALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREV 91 G +S V ++ A + E LYLD +N+++A E +FTG+++ T V+PRE+ Sbjct: 25 RGQEISSAQEVYNIMKPVFAETDDVETLYCLYLDTKNRILAMEKMFTGSLSSTAVYPREI 84 Query: 92 VKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYS 151 +KR + ++AV++ HNHP+G+ PS D +T RL+ L+ +++ + DH+IVG YS Sbjct: 85 IKRVIALKSSAVVITHNHPTGDPGPSVEDTRITIRLLVALKSMNVDLHDHIIVG-EGYYS 143 Query: 152 FAEHGLL 158 FA+ G++ Sbjct: 144 FADAGVI 150 >UniRef50_A4W1K3 UPF0758 protein SSU98_1084 n=76 Tax=Streptococcus RepID=Y1084_STRS2 Length = 246 Score = 137 bits (347), Expect = 7e-32, Method: Composition-based stats. Identities = 46/155 (29%), Positives = 81/155 (52%), Gaps = 1/155 (0%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 ++ L+ + + + +I+ R L S R+ + + ++E Sbjct: 69 LQSLTGIGRVKAIEIKAMIELGKRINQSELLLNERILGSEKLGRK-MIHEIGHKKQEHLV 127 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 LYL+ QNQ+I+ +T+F G++NR+ PRE++ A+ A ++I+ HNHPSG PS+ D Sbjct: 128 ALYLNTQNQIISQKTIFIGSVNRSIAEPREILHYAVKCMATSIIIVHNHPSGSVQPSRND 187 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEH 155 T+ L + + + + + DHLIVG + YSF E Sbjct: 188 LLFTENLKESCEKLGLVLLDHLIVGNKDYYSFREE 222 >UniRef50_C8N8A0 DNA repair protein RadC n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N8A0_9GAMM Length = 224 Score = 137 bits (347), Expect = 9e-32, Method: Composition-based stats. Identities = 55/156 (35%), Positives = 85/156 (54%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 ++ + L T + + + A R + + +P +F + VR++L + E F Sbjct: 67 LQAVRGLGKAKTAEILAVTELARRFMREEMRQPSWSFKTAADVRDYLLMQFKGQALEAFG 126 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 VL+L+ Q+ IA E L G + V R+++ ALH +AAAVILAHNHP+G PS D Sbjct: 127 VLFLNQQHGFIAFERLAAGAAAKVPVPVRQLIASALHHHAAAVILAHNHPAGSGAPSAED 186 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHG 156 + +T+ L L L+DIR+ DH IV G ++ S E G Sbjct: 187 RDVTRHLDDALALMDIRLLDHFIVAGNEMVSMRERG 222 >UniRef50_C3DWR5 DNA repair protein RadC n=1 Tax=Bacillus thuringiensis serovar sotto str. T04001 RepID=C3DWR5_BACTS Length = 154 Score = 137 bits (347), Expect = 9e-32, Method: Composition-based stats. Identities = 47/137 (34%), Positives = 73/137 (53%), Gaps = 1/137 (0%) Query: 23 LRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTIN 82 +R + + P T E + +RE F V+ L+ QN+++A G++N Sbjct: 17 IRQVREEVDIPRKKITGPDTAAEIATYFIGDDDREIFLVMCLNTQNEVVAVHRCHVGSLN 76 Query: 83 RTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHL 142 + VHPR+V K A+ N+ ++++AH HPSG PS ADK +++RL +L+ I V D L Sbjct: 77 SSVVHPRDVFKSAILNNSFSIVVAHQHPSGMVLPSDADKDVSKRLYDAGKLIGIEVLDSL 136 Query: 143 IVGG-RQIYSFAEHGLL 158 IV + YS E G L Sbjct: 137 IVNDAGRFYSLREKGYL 153 >UniRef50_D1R5B1 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R5B1_9CHLA Length = 238 Score = 137 bits (346), Expect = 1e-31, Method: Composition-based stats. Identities = 47/149 (31%), Positives = 70/149 (46%) Query: 9 GEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQN 68 G + + L R + ++ + +E F + D + Sbjct: 82 GTAKAIQLKAALNLGKRLSRTQVSAKFQIRTPLHAYHLVKDDLEKAMQEHFLTILQDVKG 141 Query: 69 QLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLV 128 +I T+ GT+ T VHPREV A+ AA++IL HNHPSG+ TPS+ D +T+ LV Sbjct: 142 YVICSPTVALGTLTATVVHPREVFYPAIRHRAASLILVHNHPSGDPTPSKEDLDVTKTLV 201 Query: 129 QVLQLVDIRVPDHLIVGGRQIYSFAEHGL 157 V +LV I V DH+I+G + S E G Sbjct: 202 AVGRLVGICVNDHIIIGRDRYVSLREEGF 230 >UniRef50_Q47CZ3 DNA repair protein RadC n=2 Tax=Dechloromonas aromatica RCB RepID=Q47CZ3_DECAR Length = 193 Score = 137 bits (346), Expect = 1e-31, Method: Composition-based stats. Identities = 74/143 (51%), Positives = 92/143 (64%), Gaps = 3/143 (2%) Query: 19 IQRALRALDRHLHEP---GVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHET 75 + A L R L E S +R+WLRLH A L+ E F V+YLD ++LI E Sbjct: 51 LDVARELLLRDLREQMCDSPVMASPQVLRDWLRLHCAGLQHEVFLVIYLDAHHRLIEAEE 110 Query: 76 LFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVD 135 LF GT+ +T V+PREVVK AL NAAA+ LAHNHPSGE PS+AD+ LTQ L L LVD Sbjct: 111 LFRGTLTQTSVYPREVVKGALTRNAAALALAHNHPSGEAEPSRADELLTQTLKSALSLVD 170 Query: 136 IRVPDHLIVGGRQIYSFAEHGLL 158 +R+ DH IV G ++ SFAE GL+ Sbjct: 171 VRIIDHFIVAGDKVVSFAELGLI 193 >UniRef50_C8NZ93 DNA repair protein RadC n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8NZ93_ERYRH Length = 235 Score = 137 bits (346), Expect = 1e-31, Method: Composition-based stats. Identities = 52/154 (33%), Positives = 80/154 (51%), Gaps = 2/154 (1%) Query: 2 KQLSFLPGEMTP--QDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEF 59 QLS + G + LR + + +S + WL L + E+E F Sbjct: 73 SQLSKIKGMKQAKCTTLLAVHELLRRIVMPFPGEKIKLSSCDRIVRWLNLEIGFEEQELF 132 Query: 60 RVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQA 119 RVL+L QN LI + LF GT +++ VHPR+V + A+ NA+ ++L HNHP G + S+A Sbjct: 133 RVLFLSTQNNLIRYLDLFKGTADKSLVHPRDVFREAVRCNASRIVLVHNHPGGSLSASEA 192 Query: 120 DKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFA 153 D +T+ L++V ++ I V DH+IV S Sbjct: 193 DVEVTRALIEVGMMIGIEVVDHIIVTSTNSVSLR 226 >UniRef50_B5Y6A0 UPF0758 protein COPRO5265_1522 n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=Y1522_COPPD Length = 235 Score = 137 bits (345), Expect = 2e-31, Method: Composition-based stats. Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 4/130 (3%) Query: 33 PGVAFTSTHAVREW----LRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHP 88 T+ E+ + +E F +L LD +N+ I H + G+ +T V P Sbjct: 106 EEARITTPEDAIEYAARYFSSMLMNEGKEHFWILLLDRKNRPIKHVEISVGSSIQTTVDP 165 Query: 89 REVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQ 148 +E++K+ +A A+IL HNHPSG+ +PS+ D +T++L Q +LV ++ DH+IVG Q Sbjct: 166 KEILKQVSLTSAQALILIHNHPSGDPSPSREDVAVTKQLKQACELVGAQLLDHIIVGKNQ 225 Query: 149 IYSFAEHGLL 158 S A L+ Sbjct: 226 HVSLAREKLI 235 >UniRef50_B0G8S0 Putative uncharacterized protein n=5 Tax=Firmicutes RepID=B0G8S0_9FIRM Length = 860 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 1/144 (0%) Query: 14 QDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAH 73 +L Q A+R +++ + + ++ ++RE F ++ L I Sbjct: 1 MADKLEQVAIRMVEQPPLYSNEPMNNPDVAIRVMNEFLSQMDRELFCIVNLQADLTPINM 60 Query: 74 ETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQL 133 + G++N ++PRE+ K A+ NA +++L HNHPSG TPS +D T R+ ++ +L Sbjct: 61 NIVSVGSLNEALINPREIFKSAILSNAHSMMLIHNHPSGNLTPSTSDIQTTARMQELGEL 120 Query: 134 VDIRVPDHLIVGGRQ-IYSFAEHG 156 + I + DH+I G YSF + G Sbjct: 121 MGISLVDHIITGRNGNYYSFRDKG 144 >UniRef50_A9B8G6 DNA repair protein RadC n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B8G6_HERA2 Length = 204 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 55/158 (34%), Positives = 77/158 (48%), Gaps = 5/158 (3%) Query: 2 KQLSFLPGEMTPQDRRLIQRALRALDRHLHE--PGVAFTSTHAVREWLRLHMAALEREEF 59 ++L+ L G R A L E G T+ V L+ M+ LE+EE Sbjct: 46 EELTPLVGRAHAIRLRT---AFAIGHAKLAEAVTGEPITTPMQVVALLQAEMSHLEQEEL 102 Query: 60 RVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQA 119 RV+ L Q +I T+ GT+N ++ + L NAA+VILAHNHPSG S Sbjct: 103 RVISLSTQAHIIGMHTVVVGTLNTAYCRMADLFREPLRRNAASVILAHNHPSGMVWASPE 162 Query: 120 DKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGL 157 D LT++ +Q QL++I + DHLI+G S E L Sbjct: 163 DILLTKQAIQAGQLLEIELLDHLIIGKGGYTSMRERRL 200 >UniRef50_D1N9M0 DNA repair protein RadC n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N9M0_9BACT Length = 227 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 53/150 (35%), Positives = 81/150 (54%), Gaps = 1/150 (0%) Query: 9 GEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQN 68 GE L ++ +T + +LR+ + ++E F VL+L+ QN Sbjct: 79 GEAAVTLLALHKQLCTKYLEQKARDVDVLDNTTKIVNFLRMKLGGGKKETFMVLFLNAQN 138 Query: 69 QLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLV 128 L+ + + GT++R V+ REV+++A++ A AVILAHNHP+G PS AD LT + Sbjct: 139 HLLCFDVI-PGTVDRATVYAREVLEKAINTKATAVILAHNHPTGICEPSPADIKLTNTIR 197 Query: 129 QVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 QVLQ V I + DH+IV +SFA +L Sbjct: 198 QVLQPVGILLHDHIIVAPSCYFSFASRRML 227 >UniRef50_A8ZTW3 DNA repair protein RadC n=5 Tax=Bacteria RepID=A8ZTW3_DESOH Length = 223 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 44/133 (33%), Positives = 69/133 (51%), Gaps = 1/133 (0%) Query: 23 LRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTIN 82 + R + G+ V L H A ++E F + ++ N++++ + G IN Sbjct: 89 FEFVRRRVKPQGLKIKFPADVLP-LIHHYADRKQEHFLCVSINGANEVMSVRVVSIGLIN 147 Query: 83 RTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHL 142 +T+VHPREV L A+AVI+AHNHP G+ PS+ D +T++L Q + + DH+ Sbjct: 148 KTQVHPREVFADVLAERASAVIVAHNHPHGDLAPSREDIQVTRQLKDAAQTLGLTFLDHI 207 Query: 143 IVGGRQIYSFAEH 155 I YSFAE Sbjct: 208 IFNTTGYYSFAEQ 220 >UniRef50_C7VI58 DNA repair protein RadC n=3 Tax=Bacilli RepID=C7VI58_ENTFA Length = 117 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 46/109 (42%), Positives = 68/109 (62%), Gaps = 1/109 (0%) Query: 51 MAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHP 110 + +RE F V+ L+ +N ++A G++N + VHPREV K A+ NAA+VI+AH HP Sbjct: 9 IGRDDREVFFVMCLNTRNNVVAVLRCHVGSLNASLVHPREVFKSAILNNAASVIVAHQHP 68 Query: 111 SGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIV-GGRQIYSFAEHGLL 158 S + TPS+ D +T+RLV+ +L+DI V DHL+V S E G + Sbjct: 69 SDDITPSKEDINVTKRLVEAGKLLDIEVLDHLVVNSDNGFTSLKERGYI 117 >UniRef50_Q1MS20 DNA repair proteins n=3 Tax=Desulfovibrionaceae RepID=Q1MS20_LAWIP Length = 226 Score = 136 bits (343), Expect = 2e-31, Method: Composition-based stats. Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 2/158 (1%) Query: 3 QLSFLP--GEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 +L +P GE +LI+ + + V E + EE Sbjct: 69 ELETIPQFGEALSAFWKLIREIFARYAETPVREKIQLCTPKIVAEIAKARFTGCPHEEVW 128 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 + +D QN+LI+ E L GTI + ++PR+ ++ L A+ IL HNHP G + S D Sbjct: 129 IATVDTQNRLISWERLSKGTIGSSPLYPRDTIEIVLKRKASGFILVHNHPGGSSNASSFD 188 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +T+ L + Q +++R+ DH+IV + YS GLL Sbjct: 189 IEITRHLEHIAQSINLRLIDHIIVTEKNCYSIRNDGLL 226 >UniRef50_A9BIK5 DNA repair protein RadC n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BIK5_PETMO Length = 222 Score = 136 bits (343), Expect = 2e-31, Method: Composition-based stats. Identities = 40/137 (29%), Positives = 74/137 (54%), Gaps = 1/137 (0%) Query: 16 RRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHET 75 + ++ R + L + TS M L E R ++LD++ +I + Sbjct: 78 KAALEIGKRYHLQKLRQKYQKVTSPEEAYHVC-EDMIYLSTETVRAIFLDSKLHIITIKD 136 Query: 76 LFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVD 135 + GT+N + HPR++ + A+ +NA + IL HNHPSG+ TPS D+ +T++++ +++ Sbjct: 137 ISNGTVNMSIAHPRDIFREAIMYNAVSFILVHNHPSGDPTPSMHDRDITKKIMDSGEILG 196 Query: 136 IRVPDHLIVGGRQIYSF 152 I + DH+I+G +SF Sbjct: 197 INMNDHIIIGKDSYFSF 213 >UniRef50_B1H050 DNA repair protein RadC n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1H050_UNCTG Length = 229 Score = 136 bits (343), Expect = 2e-31, Method: Composition-based stats. Identities = 37/127 (29%), Positives = 73/127 (57%) Query: 32 EPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREV 91 + +S V+++L ++ E+F + L++ N++ + +GT+N++ + PR++ Sbjct: 103 KEKDRLSSPKNVKDYLISTLSGENIEKFYAILLNSGNRVTDCLEIESGTVNKSLLIPRKI 162 Query: 92 VKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYS 151 + AL AA+V++AHNHP G PSQ D T + + L+ ++I + DH+I+ +S Sbjct: 163 AEIALKCRAASVVIAHNHPGGTLKPSQNDINATVAVKKALESIEISLLDHIIISNNNYFS 222 Query: 152 FAEHGLL 158 F E+ L+ Sbjct: 223 FKEYSLI 229 >UniRef50_B5YDI9 DNA repair protein n=2 Tax=Dictyoglomus RepID=B5YDI9_DICT6 Length = 228 Score = 136 bits (342), Expect = 3e-31, Method: Composition-based stats. Identities = 43/145 (29%), Positives = 73/145 (50%) Query: 14 QDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAH 73 Q + I+ R G + ++ + + M L+ E +Y+D +N+ ++ Sbjct: 84 QIKASIELGRRIFSEKKSYFGESISNPYDAFLIFKEDMFDLKEEHLFCIYMDIKNKCLSK 143 Query: 74 ETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQL 133 + G +N PR++ K AL N+A +ILAHNHPSG+ TPS+ D T+RL++ ++ Sbjct: 144 RLIAKGDLNIVYASPRDIFKYALQENSAKIILAHNHPSGDLTPSEDDVIFTKRLIEAGKI 203 Query: 134 VDIRVPDHLIVGGRQIYSFAEHGLL 158 + I V DHLI+ S E + Sbjct: 204 LGIEVLDHLIIHNEDYLSLKEKNFI 228 >UniRef50_A6L552 DNA repair protein n=5 Tax=Bacteroidales RepID=A6L552_BACV8 Length = 153 Score = 136 bits (342), Expect = 3e-31, Method: Composition-based stats. Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 3/139 (2%) Query: 23 LRALDRHLHEPGVAFTSTHAVREWLRLHMAALE---REEFRVLYLDNQNQLIAHETLFTG 79 + + + S+ ++L +E F+VL+L+ +Q++ + + G Sbjct: 15 VELTYKSTSKSRNKIYSSEDAYKYLLPTYKEGTICYKEYFKVLFLNQSSQVLGYTLISEG 74 Query: 80 TINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVP 139 I T V R +++ AL N+ A+ILAHNHPSG PS+ D +T+++ QL+ I V Sbjct: 75 GITDTTVDVRVILQAALLTNSVALILAHNHPSGNLKPSRQDMEITKQVKNAAQLMRITVI 134 Query: 140 DHLIVGGRQIYSFAEHGLL 158 DHLI+ YSFA+ G L Sbjct: 135 DHLILTDAGYYSFADEGQL 153 >UniRef50_B4RG10 DNA repair protein RadC n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RG10_PHEZH Length = 256 Score = 135 bits (341), Expect = 4e-31, Method: Composition-based stats. Identities = 52/156 (33%), Positives = 77/156 (49%) Query: 3 QLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVL 62 +L G RL++ A R + ++LR + RE FRV+ Sbjct: 100 RLERQIGAEACLQLRLVREASIRTTRGAVISRRFDANAKRTHDYLRALLEFETRESFRVI 159 Query: 63 YLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKT 122 +LD + E L GT++ V+ REV++ AL +AAA++L HNHPSG+ TPS AD Sbjct: 160 FLDASGAWSSDEELGRGTVDHAPVYVREVMREALRRDAAALVLVHNHPSGDPTPSAADVQ 219 Query: 123 LTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +T + + + V DHL+VG + SF GLL Sbjct: 220 VTSEIAAAASALGMSVKDHLVVGSHGVASFQALGLL 255 >UniRef50_C1QC41 DNA repair protein n=2 Tax=Brachyspira RepID=C1QC41_9SPIR Length = 227 Score = 135 bits (341), Expect = 4e-31, Method: Composition-based stats. Identities = 40/118 (33%), Positives = 72/118 (61%) Query: 41 HAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNA 100 + +L + + L+ E F ++ LD + I+ E +F GTI+ ++PR++V+++L + Sbjct: 101 RDLINYLIIKLGKLKFETFSIVCLDVNKKFISMEHIFRGTIDSATIYPRDLVEKSLSLGS 160 Query: 101 AAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 + VI++HNHPSG PS+ D +T L + ++VDI++ DH+I+ YSF E G+ Sbjct: 161 SYVIVSHNHPSGIAKPSKEDINITNVLYKAFKMVDIKMLDHIIIAANSYYSFREDGMF 218 >UniRef50_B9L1S0 DNA repair protein radC homolog n=4 Tax=Bacteria RepID=B9L1S0_THERP Length = 261 Score = 135 bits (340), Expect = 5e-31, Method: Composition-based stats. Identities = 46/134 (34%), Positives = 70/134 (52%) Query: 24 RALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINR 83 R L E + V MA LE+E+ RV+ LD +N+++ T+ G +N Sbjct: 123 RRLALAQPEERPVIRTPEDVYAIAGAEMATLEQEQLRVVLLDTRNRVVRTVTVAQGHVNG 182 Query: 84 TEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLI 143 +V E+ + A+ N A++L HNHPSG+ TPS+ D LT+ V+ L+ I V DHL+ Sbjct: 183 AQVRIAELFREAIRANTPALVLLHNHPSGDPTPSRQDIELTESAVEAGTLLGIEVVDHLV 242 Query: 144 VGGRQIYSFAEHGL 157 +G + S GL Sbjct: 243 IGHGRFCSLRRLGL 256 >UniRef50_UPI0001BC305A putative DNA primase n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC305A Length = 717 Score = 134 bits (338), Expect = 9e-31, Method: Composition-based stats. Identities = 46/143 (32%), Positives = 72/143 (50%), Gaps = 1/143 (0%) Query: 17 RLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETL 76 RL Q A+R ++ A + + +RE V+ L + I Sbjct: 28 RLNQVAIRMVEMPPLFSEEPMNGPAAAVKVMADTFRDYDREVVAVVNLRADMRPININIA 87 Query: 77 FTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDI 136 G ++++ HPRE++K + NAAA+IL HNHPSG PS D LT R+ ++ L+ + Sbjct: 88 SIGALDQSIAHPREILKSTILSNAAAIILVHNHPSGRLAPSVEDIGLTDRMNKICDLIGV 147 Query: 137 RVPDHLIVG-GRQIYSFAEHGLL 158 ++ DH+IVG G + YSF E + Sbjct: 148 KLVDHIIVGPGNEFYSFQEKNQM 170 >UniRef50_Q2FT43 UPF0758 protein Mhun_2739 n=5 Tax=Archaea RepID=Y2739_METHJ Length = 225 Score = 134 bits (337), Expect = 1e-30, Method: Composition-based stats. Identities = 44/159 (27%), Positives = 76/159 (47%), Gaps = 5/159 (3%) Query: 4 LSFLPGEMTPQDRRLIQRALRALDRH---LHEPGVAFTSTHAVREWLR-LHMAALEREEF 59 L + G + P ++ +R+ + + T + + ++ +E F Sbjct: 68 LLRING-IGPTKAAVLMACFELANRYGTPAEKERIRITEPDHILKISEVTDLSGKSQEHF 126 Query: 60 RVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQA 119 V L+ +++I T+ G +N + VHPREV A+ AAA+I HNHPSG PS Sbjct: 127 LVTTLNGASEVICTRTITMGLLNHSLVHPREVFADAITDRAAAIICIHNHPSGNPEPSSE 186 Query: 120 DKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D T+T++L + +++ I + DHLI ++ S G L Sbjct: 187 DITVTRQLSEAGKILGISLLDHLIYTKGKVTSLRSLGYL 225 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_A1B4F1 UPF0758 protein Pden_2304 n=44 Tax=Alphaproteoba... 183 1e-45 UniRef50_B0UUW7 UPF0758 protein HSM_0009 n=10 Tax=Pasteurellacea... 181 7e-45 UniRef50_B0T9F0 DNA repair protein RadC n=1 Tax=Caulobacter sp. ... 181 9e-45 UniRef50_C9L5T8 DNA repair protein RadC n=4 Tax=Clostridiales Re... 180 1e-44 UniRef50_B1IPT7 DNA repair protein RadC n=3 Tax=Enterobacteriace... 179 3e-44 UniRef50_C8VVH2 DNA repair protein RadC n=1 Tax=Desulfotomaculum... 179 3e-44 UniRef50_P52140 UPF0758 protein yfjY n=148 Tax=Enterobacteriacea... 179 3e-44 UniRef50_A6SWN0 DNA repair protein RadC n=14 Tax=Proteobacteria ... 178 4e-44 UniRef50_B2FJW1 UPF0758 protein Smlt0399 n=129 Tax=Proteobacteri... 178 4e-44 UniRef50_B5EXE3 UPF0758 protein yicR n=116 Tax=Enterobacteriacea... 178 6e-44 UniRef50_Q2J299 UPF0758 protein RPB_0700 n=15 Tax=Alphaproteobac... 178 6e-44 UniRef50_A9AE97 DNA repair protein n=8 Tax=Bacteria RepID=A9AE97... 178 7e-44 UniRef50_C8WXL6 DNA repair protein RadC n=3 Tax=Alicyclobacillus... 177 9e-44 UniRef50_D1JB12 Probable DNA repair protein radC homolog n=2 Tax... 177 1e-43 UniRef50_C8U0Q3 Predicted DNA repair protein n=21 Tax=Enterobact... 177 1e-43 UniRef50_B3HA66 DNA repair protein RadC n=3 Tax=Enterobacteriace... 177 1e-43 UniRef50_Q8UEZ6 UPF0758 protein Atu1607 n=100 Tax=Alphaproteobac... 176 1e-43 UniRef50_A9VIS8 UPF0758 protein BcerKBAB4_4299 n=107 Tax=Firmicu... 176 2e-43 UniRef50_A7MQ95 UPF0758 protein ESA_04094 n=32 Tax=Bacteria RepI... 176 2e-43 UniRef50_Q46A65 UPF0758 protein Mbar_A2303 n=2 Tax=Methanosarcin... 176 3e-43 UniRef50_A4W511 UPF0758 protein Ent638_0101 n=3 Tax=Enterobacter... 176 3e-43 UniRef50_Q3A8G4 UPF0758 protein Pcar_0065 n=2 Tax=Bacteria RepID... 175 4e-43 UniRef50_C4Z083 DNA repair protein RadC n=1 Tax=Eubacterium elig... 175 4e-43 UniRef50_Q2LSS5 DNA repair protein n=1 Tax=Syntrophus aciditroph... 173 1e-42 UniRef50_Q46XP0 UPF0758 protein Reut_A2732 n=12 Tax=Proteobacter... 173 1e-42 UniRef50_C9Y8Q3 DNA repair protein radC homolog n=1 Tax=Curvibac... 173 2e-42 UniRef50_B5YIR9 DNA repair protein n=1 Tax=Thermodesulfovibrio y... 173 2e-42 UniRef50_C5V0A3 DNA repair protein RadC n=1 Tax=Gallionella ferr... 173 2e-42 UniRef50_B3E339 UPF0758 protein Glov_0523 n=8 Tax=Desulfuromonad... 173 3e-42 UniRef50_A8R890 Putative uncharacterized protein n=1 Tax=Eubacte... 172 3e-42 UniRef50_C6DAT0 DNA repair protein RadC n=5 Tax=Enterobacteriace... 172 3e-42 UniRef50_C7RDS9 DNA repair protein RadC n=3 Tax=Anaerococcus Rep... 172 3e-42 UniRef50_A1UT15 DNA repair protein, RadC family n=3 Tax=Bartonel... 172 3e-42 UniRef50_C6LCB9 DNA repair protein RadC n=3 Tax=Clostridiales Re... 172 3e-42 UniRef50_Q1AVT6 UPF0758 protein Rxyl_1530 n=3 Tax=Bacteria RepID... 172 4e-42 UniRef50_A6TQH8 UPF0758 protein Amet_2289 n=54 Tax=cellular orga... 171 6e-42 UniRef50_A7FEQ9 DNA repair protein, RadC family n=4 Tax=Yersinia... 171 7e-42 UniRef50_A5KLJ1 Putative uncharacterized protein n=5 Tax=Clostri... 171 9e-42 UniRef50_A6QHJ5 UPF0758 protein NWMN_1555 n=52 Tax=Staphylococcu... 171 9e-42 UniRef50_Q04B84 DNA repair protein n=2 Tax=Lactobacillus delbrue... 170 1e-41 UniRef50_A5ZRS6 Putative uncharacterized protein n=5 Tax=Clostri... 170 1e-41 UniRef50_A5UDB6 UPF0758 protein CGSHiEE_07200 n=30 Tax=Gammaprot... 170 2e-41 UniRef50_D0MFA0 DNA repair protein RadC n=1 Tax=Rhodothermus mar... 169 2e-41 UniRef50_A4J365 DNA repair protein RadC n=1 Tax=Desulfotomaculum... 169 2e-41 UniRef50_C5SDF8 DNA repair protein RadC n=1 Tax=Allochromatium v... 169 2e-41 UniRef50_Q4UPP0 UPF0758 protein XC_3944 n=35 Tax=Proteobacteria ... 169 2e-41 UniRef50_Q38XC8 UPF0758 protein LCA_0852 n=1 Tax=Lactobacillus s... 169 3e-41 UniRef50_B1YJT0 DNA repair protein RadC n=2 Tax=Exiguobacterium ... 169 4e-41 UniRef50_Q2G8R8 DNA repair protein RadC n=5 Tax=Sphingomonadales... 168 4e-41 UniRef50_C5SK46 DNA repair protein RadC n=1 Tax=Asticcacaulis ex... 168 4e-41 UniRef50_B9Y7M6 Putative uncharacterized protein n=1 Tax=Holdema... 168 4e-41 UniRef50_Q0AJV4 DNA repair protein RadC n=18 Tax=Proteobacteria ... 168 5e-41 UniRef50_B9E733 DNA repair protein RadC homolog n=1 Tax=Macrococ... 168 5e-41 UniRef50_Q21TE2 UPF0758 protein Rfer_3252 n=12 Tax=cellular orga... 168 6e-41 UniRef50_B0T9R6 DNA repair protein RadC n=4 Tax=Alphaproteobacte... 167 9e-41 UniRef50_Q0BRK0 DNA repair protein radC n=5 Tax=Alphaproteobacte... 167 1e-40 UniRef50_C7GE95 DNA repair protein RadC n=2 Tax=Roseburia RepID=... 166 1e-40 UniRef50_Q9KUK8 UPF0758 protein VC_0510 n=11 Tax=Gammaproteobact... 166 2e-40 UniRef50_Q82ZX1 UPF0758 protein EF_2926 n=40 Tax=Firmicutes RepI... 166 2e-40 UniRef50_B2UAP0 UPF0758 protein Rpic_2712 n=3 Tax=Burkholderiace... 166 2e-40 UniRef50_C0Q9Z9 RadC3 n=1 Tax=Desulfobacterium autotrophicum HRM... 166 2e-40 UniRef50_Q0ACW7 DNA repair protein RadC n=2 Tax=Proteobacteria R... 166 2e-40 UniRef50_Q9KR57 UPF0758 protein VC_1786 n=59 Tax=Proteobacteria ... 165 4e-40 UniRef50_B4Y2Y7 RadC n=1 Tax=Aquabacterium sp. PL1F5 RepID=B4Y2Y... 165 4e-40 UniRef50_Q2S042 UPF0758 protein SRU_2338 n=1 Tax=Salinibacter ru... 165 4e-40 UniRef50_C5D8D2 DNA repair protein RadC n=4 Tax=Firmicutes RepID... 164 6e-40 UniRef50_A0R7V6 DNA repair protein RadC n=5 Tax=Desulfuromonadal... 164 6e-40 UniRef50_A4SUN7 DNA repair protein n=2 Tax=Aeromonas salmonicida... 164 7e-40 UniRef50_B9ECC3 Putative uncharacterized protein n=1 Tax=Macroco... 164 7e-40 UniRef50_A1TJG0 DNA repair protein RadC n=1 Tax=Acidovorax citru... 164 9e-40 UniRef50_B7ANR2 Putative uncharacterized protein n=1 Tax=Bactero... 164 1e-39 UniRef50_D2BJ47 DNA repair protein n=5 Tax=Dehalococcoides RepID... 164 1e-39 UniRef50_A5IM26 UPF0758 protein Tpet_1235 n=7 Tax=Thermotogaceae... 163 1e-39 UniRef50_C4XRP2 DNA repair protein RadC n=4 Tax=Desulfovibrional... 163 1e-39 UniRef50_UPI0001BC32AB DNA repair protein RadC n=1 Tax=Butyrivib... 163 1e-39 UniRef50_C6XNR3 DNA repair protein RadC n=1 Tax=Hirschia baltica... 163 1e-39 UniRef50_C6BYC2 DNA repair protein RadC n=1 Tax=Desulfovibrio sa... 163 2e-39 UniRef50_D1U9S4 DNA repair protein RadC n=1 Tax=Desulfovibrio ae... 163 2e-39 UniRef50_A9IU27 UPF0758 protein Bpet3149 n=5 Tax=Bordetella RepI... 163 2e-39 UniRef50_B2A699 DNA repair protein RadC n=1 Tax=Natranaerobius t... 163 3e-39 UniRef50_Q47ZW8 DNA repair protein, RadC family protein n=20 Tax... 163 3e-39 UniRef50_Q2SAN5 DNA repair protein n=2 Tax=Hahella chejuensis KC... 163 3e-39 UniRef50_C0R2T1 DNA repair protein RadC n=7 Tax=Wolbachia RepID=... 162 3e-39 UniRef50_Q64AS5 DNA repair proteins n=1 Tax=uncultured archaeon ... 162 3e-39 UniRef50_Q5E054 DNA repair protein RadC n=3 Tax=Gammaproteobacte... 162 3e-39 UniRef50_Q3BQ28 RadC family DNA repair protein n=5 Tax=Xanthomon... 162 3e-39 UniRef50_Q7VMM9 Conserved possible DNA repair protein n=1 Tax=Ha... 162 3e-39 UniRef50_A5FRP1 DNA repair protein RadC n=6 Tax=cellular organis... 162 4e-39 UniRef50_B8KQ45 DNA repair protein RadC n=1 Tax=gamma proteobact... 162 4e-39 UniRef50_B2V090 UPF0758 protein CLH_0547 n=18 Tax=Clostridium Re... 162 4e-39 UniRef50_Q3AF80 UPF0758 protein CHY_0341 n=1 Tax=Carboxydothermu... 161 5e-39 UniRef50_C6J5M2 DNA repair protein RadC n=1 Tax=Paenibacillus sp... 161 6e-39 UniRef50_D2NHT0 Putative phage DNA repair protein n=1 Tax=Escher... 161 7e-39 UniRef50_B7C9V0 Putative uncharacterized protein n=1 Tax=Eubacte... 161 8e-39 UniRef50_A5URD0 UPF0758 protein RoseRS_0767 n=7 Tax=Bacteria Rep... 160 1e-38 UniRef50_B4X5D3 DNA repair protein RadC n=4 Tax=Alcanivorax sp. ... 160 1e-38 UniRef50_B1C9I2 Putative uncharacterized protein n=1 Tax=Anaerof... 160 1e-38 UniRef50_A9KL05 DNA repair protein RadC n=7 Tax=Clostridiales Re... 160 1e-38 UniRef50_A1BHA1 UPF0758 protein Cpha266_1761 n=11 Tax=Chlorobiac... 160 1e-38 UniRef50_A7HJG0 DNA repair protein RadC n=3 Tax=Thermotogaceae R... 160 1e-38 UniRef50_D2RM81 DNA repair protein RadC n=2 Tax=Acidaminococcus ... 160 1e-38 UniRef50_B4CZF8 DNA repair protein RadC n=2 Tax=Verrucomicrobia ... 160 1e-38 UniRef50_B9MPC4 DNA repair protein RadC n=2 Tax=Clostridia RepID... 160 2e-38 UniRef50_B0S3Y4 UPF0758 protein FMG_0357 n=2 Tax=Finegoldia magn... 160 2e-38 UniRef50_A0Z2T6 DNA repair protein RadC n=1 Tax=marine gamma pro... 159 2e-38 UniRef50_B5YL92 DNA repair protein RadC n=1 Tax=Thermodesulfovib... 159 2e-38 UniRef50_C7M9C6 DNA repair protein RadC n=1 Tax=Capnocytophaga o... 159 2e-38 UniRef50_D2MNQ5 Putative DNA repair protein RadC n=1 Tax=Bulleid... 159 2e-38 UniRef50_UPI000185C66E DNA repair protein RadC n=1 Tax=Capnocyto... 159 2e-38 UniRef50_B2KEG6 DNA repair protein RadC n=1 Tax=Elusimicrobium m... 159 2e-38 UniRef50_C2KVW9 Possible DNA repair protein RadC n=1 Tax=Oribact... 159 2e-38 UniRef50_Q0AWG3 UPF0758 protein Swol_1642 n=12 Tax=Firmicutes Re... 159 3e-38 UniRef50_Q2GL92 DNA repair protein RadC n=12 Tax=Rickettsiales R... 159 3e-38 UniRef50_A1B298 DNA repair protein RadC n=7 Tax=Bacteria RepID=A... 159 3e-38 UniRef50_C4FYP9 Putative uncharacterized protein n=1 Tax=Abiotro... 159 3e-38 UniRef50_C7PSZ0 DNA repair protein RadC n=1 Tax=Chitinophaga pin... 159 3e-38 UniRef50_UPI0001C34E02 DNA repair protein RadC n=1 Tax=Clostridi... 159 4e-38 UniRef50_Q2S8K4 DNA repair protein n=1 Tax=Hahella chejuensis KC... 159 4e-38 UniRef50_A8YUM9 DNA repair protein RadC n=9 Tax=Lactobacillus Re... 159 4e-38 UniRef50_D1R5B1 Putative uncharacterized protein n=1 Tax=Parachl... 158 4e-38 UniRef50_Q5FNC4 DNA repair protein RadC n=1 Tax=Gluconobacter ox... 158 4e-38 UniRef50_D1VVJ8 DNA repair protein RadC-like protein n=1 Tax=Pep... 158 4e-38 UniRef50_C4LDH2 DNA repair protein RadC n=2 Tax=Aeromonadaceae R... 158 4e-38 UniRef50_B4S9N8 DNA repair protein RadC n=1 Tax=Prosthecochloris... 158 4e-38 UniRef50_C9LLN8 DNA repair protein RadC n=1 Tax=Dialister invisu... 158 5e-38 UniRef50_C2BCF6 DNA repair protein RadC n=2 Tax=Anaerococcus Rep... 158 5e-38 UniRef50_C7GYN9 DNA repair protein RadC n=1 Tax=Eubacterium saph... 158 5e-38 UniRef50_A9I305 DNA repair protein radC homolog n=3 Tax=Proteoba... 158 6e-38 UniRef50_B1HKP9 DNA repair protein n=1 Tax=Burkholderia pseudoma... 158 6e-38 UniRef50_A3ER13 DNA repair protein (RadC) n=3 Tax=Leptospirillum... 157 7e-38 UniRef50_C0GE80 DNA repair protein RadC n=1 Tax=Dethiobacter alk... 157 7e-38 UniRef50_A1K759 DNA repair protein n=2 Tax=Rhodocyclaceae RepID=... 157 9e-38 UniRef50_B1I0K4 DNA repair protein radC-like protein n=1 Tax=Lys... 157 1e-37 UniRef50_B1JAY7 DNA repair protein RadC n=4 Tax=Pseudomonas RepI... 157 1e-37 UniRef50_C2E2B4 DNA repair protein RadC n=8 Tax=Lactobacillus je... 157 1e-37 UniRef50_Q042N7 DNA repair protein n=7 Tax=Lactobacillus RepID=Q... 156 1e-37 UniRef50_A5FMW5 UPF0758 protein Fjoh_0413 n=33 Tax=Bacteroidetes... 156 2e-37 UniRef50_Q2B8H5 Putative uncharacterized protein n=1 Tax=Bacillu... 156 2e-37 UniRef50_Q3JDF2 DNA repair protein RadC n=4 Tax=Gammaproteobacte... 156 2e-37 UniRef50_C0BM81 DNA repair protein RadC n=2 Tax=Bacteroidetes Re... 156 2e-37 UniRef50_Q1WT78 DNA repair protein n=3 Tax=Lactobacillus RepID=Q... 156 2e-37 UniRef50_C9NPT2 DNA repair protein RadC n=1 Tax=Vibrio coralliil... 156 2e-37 UniRef50_A6DS55 DNA repair protein RadC n=1 Tax=Lentisphaera ara... 156 2e-37 UniRef50_C7JGI7 DNA repair protein RadC n=8 Tax=Acetobacter past... 156 2e-37 UniRef50_A1SR15 UPF0758 protein Ping_0056 n=2 Tax=Gammaproteobac... 156 2e-37 UniRef50_Q1DAY3 DNA repair protein RadC n=1 Tax=Myxococcus xanth... 156 3e-37 UniRef50_Q31EB6 UPF0758 protein Tcr_1917 n=5 Tax=Gammaproteobact... 156 3e-37 UniRef50_A9HJN5 DNA repair protein RadC n=1 Tax=Gluconacetobacte... 156 3e-37 UniRef50_D1QST5 DNA repair protein RadC n=13 Tax=Bacteroidales R... 156 3e-37 UniRef50_C4ZA49 DNA repair protein RadC n=1 Tax=Eubacterium rect... 156 3e-37 UniRef50_B5V5B9 RadC n=5 Tax=Firmicutes RepID=B5V5B9_BACCE 155 3e-37 UniRef50_C0GMV6 DNA repair protein RadC n=1 Tax=Desulfonatronosp... 155 3e-37 UniRef50_Q8DI83 UPF0758 protein tlr1707 n=31 Tax=Cyanobacteria R... 155 3e-37 UniRef50_UPI0000E0FF1E DNA repair protein RadC n=1 Tax=Rhodobact... 155 4e-37 UniRef50_UPI00016C0069 DNA repair protein RadC n=1 Tax=Epulopisc... 155 4e-37 UniRef50_C0BG63 DNA repair protein RadC n=1 Tax=Flavobacteria ba... 155 4e-37 UniRef50_Q7UL21 DNA repair protein n=4 Tax=Bacteria RepID=Q7UL21... 155 4e-37 UniRef50_B0RXB0 DNA repair protein radC homolog n=3 Tax=Xanthomo... 155 5e-37 UniRef50_B9XSW5 DNA repair protein RadC n=1 Tax=bacterium Ellin5... 154 6e-37 UniRef50_Q3A6E7 DNA repair protein, RadC-like n=3 Tax=Desulfurom... 154 6e-37 UniRef50_A9IEU5 Putative DNA repair protein n=1 Tax=Bordetella p... 154 7e-37 UniRef50_D1W0Q6 Putative DNA repair protein RadC n=2 Tax=Prevote... 154 7e-37 UniRef50_B2V8J4 DNA repair protein RadC n=5 Tax=Aquificales RepI... 154 8e-37 UniRef50_A6Q5Q5 DNA repair protein RadC n=2 Tax=unclassified Eps... 154 8e-37 UniRef50_Q1RK76 DNA repair protein RadC n=11 Tax=Rickettsia RepI... 154 9e-37 UniRef50_C6E4Z0 DNA repair protein RadC n=3 Tax=Geobacter RepID=... 154 1e-36 UniRef50_C4V569 DNA repair protein RadC n=2 Tax=Selenomonas RepI... 154 1e-36 UniRef50_Q6F7Z8 UPF0758 protein ACIAD3126 n=19 Tax=Proteobacteri... 153 1e-36 UniRef50_C3WLA1 DNA repair protein radC n=2 Tax=Fusobacterium Re... 153 1e-36 UniRef50_Q6AQC9 Related to DNA repair protein RadC n=4 Tax=Delta... 153 1e-36 UniRef50_B3JIE2 Putative uncharacterized protein n=10 Tax=Bacter... 153 1e-36 UniRef50_C3WF45 Putative uncharacterized protein n=1 Tax=Fusobac... 153 2e-36 UniRef50_B9QT39 DNA repair protein RadC n=1 Tax=Labrenzia alexan... 153 2e-36 UniRef50_Q6TFX1 ORF25 n=3 Tax=Enterobacteriaceae RepID=Q6TFX1_ERWAM 153 2e-36 UniRef50_C9LCX8 DNA repair protein RadC n=1 Tax=Prevotella tanne... 152 3e-36 UniRef50_Q03R16 DNA repair protein n=1 Tax=Lactobacillus brevis ... 152 3e-36 UniRef50_Q6MAB0 UPF0758 protein pc1765 n=1 Tax=Candidatus Protoc... 152 3e-36 UniRef50_Q5DY97 DNA repair protein RadC n=17 Tax=Proteobacteria ... 152 3e-36 UniRef50_Q8VR59 Putative intergenic-region protein n=24 Tax=Esch... 152 3e-36 UniRef50_B2URH1 DNA repair protein RadC n=1 Tax=Akkermansia muci... 152 4e-36 UniRef50_Q3JV52 UPF0758 protein BURPS1710b_1139 n=75 Tax=Proteob... 152 4e-36 UniRef50_Q5WTW4 UPF0758 protein lpl2409 n=6 Tax=Legionella RepID... 151 8e-36 UniRef50_O67541 UPF0758 protein aq_1610 n=2 Tax=Aquificaceae Rep... 151 8e-36 UniRef50_D1AWS8 DNA repair protein RadC n=1 Tax=Streptobacillus ... 151 1e-35 UniRef50_C8PDJ9 DNA repair protein RadC n=1 Tax=Lactobacillus in... 151 1e-35 UniRef50_C4SWK5 DNA repair protein n=1 Tax=Yersinia intermedia A... 150 1e-35 UniRef50_Q02HM7 Putative uncharacterized protein n=1 Tax=Pseudom... 150 1e-35 UniRef50_D1N9M0 DNA repair protein RadC n=1 Tax=Victivallis vade... 150 1e-35 UniRef50_A5VEU8 DNA repair protein RadC n=4 Tax=Sphingomonadales... 150 1e-35 UniRef50_C5TNC6 DNA repair protein RadC n=3 Tax=Neisseria RepID=... 150 1e-35 UniRef50_C7TC16 DNA repair protein n=8 Tax=Lactobacillus RepID=C... 150 2e-35 UniRef50_Q7MVX9 UPF0758 protein PG_0894 n=24 Tax=Bacteroidales R... 149 2e-35 UniRef50_B4RM65 UPF0758 protein NGK_1225 n=25 Tax=Neisseriaceae ... 149 2e-35 UniRef50_B6AT60 DNA repair protein RadC n=1 Tax=Rhodobacterales ... 149 2e-35 UniRef50_C8NZ93 DNA repair protein RadC n=1 Tax=Erysipelothrix r... 149 2e-35 UniRef50_UPI0001BC61BD DNA repair protein radC n=3 Tax=Fusobacte... 149 2e-35 UniRef50_A7V531 Putative uncharacterized protein n=1 Tax=Bactero... 149 3e-35 UniRef50_B5YDI9 DNA repair protein n=2 Tax=Dictyoglomus RepID=B5... 149 4e-35 UniRef50_Q9LAI3 RadC (Fragment) n=2 Tax=Firmicutes RepID=Q9LAI3_... 148 4e-35 UniRef50_B8FHA4 DNA repair protein RadC n=1 Tax=Desulfatibacillu... 148 4e-35 UniRef50_A0L491 DNA repair protein RadC n=4 Tax=Bacteria RepID=A... 148 6e-35 UniRef50_UPI000196B4AA hypothetical protein CATMIT_00107 n=1 Tax... 148 6e-35 UniRef50_A8ZUS2 DNA repair protein RadC n=1 Tax=Desulfococcus ol... 148 6e-35 UniRef50_A2RLC4 UPF0758 protein llmg_1515 n=4 Tax=Lactococcus la... 147 7e-35 UniRef50_B0MF12 Putative uncharacterized protein n=3 Tax=Clostri... 147 7e-35 UniRef50_A4W1K3 UPF0758 protein SSU98_1084 n=76 Tax=Streptococcu... 147 8e-35 UniRef50_C5NXB5 DNA repair protein RadC homolog n=1 Tax=Gemella ... 147 8e-35 UniRef50_C3DWR5 DNA repair protein RadC n=1 Tax=Bacillus thuring... 147 9e-35 UniRef50_C6VI64 DNA repair protein n=3 Tax=Lactobacillus plantar... 147 9e-35 UniRef50_Q4QPE3 Putative DNA repair radC-like protein n=5 Tax=Ha... 147 9e-35 UniRef50_B4RG10 DNA repair protein RadC n=1 Tax=Phenylobacterium... 147 1e-34 UniRef50_A6GHT1 DNA repair protein RadC n=1 Tax=Plesiocystis pac... 147 1e-34 UniRef50_Q2FT43 UPF0758 protein Mhun_2739 n=5 Tax=Archaea RepID=... 147 1e-34 UniRef50_B5Y6A0 UPF0758 protein COPRO5265_1522 n=1 Tax=Coprother... 147 1e-34 UniRef50_B9L1S0 DNA repair protein radC homolog n=4 Tax=Bacteria... 146 2e-34 UniRef50_B5CP31 Putative uncharacterized protein n=2 Tax=Clostri... 146 2e-34 UniRef50_D2EK65 DNA repair protein n=1 Tax=Pediococcus acidilact... 146 2e-34 UniRef50_C1SJ65 DNA repair protein radc n=1 Tax=Denitrovibrio ac... 146 2e-34 UniRef50_Q0F0W4 DNA repair protein RadC n=1 Tax=Mariprofundus fe... 146 2e-34 UniRef50_Q1MS20 DNA repair proteins n=3 Tax=Desulfovibrionaceae ... 146 2e-34 UniRef50_B0G8S0 Putative uncharacterized protein n=5 Tax=Firmicu... 146 3e-34 UniRef50_Q4EGF4 DNA repair protein RadC n=7 Tax=Bacilli RepID=Q4... 145 3e-34 UniRef50_C7NDB9 DNA repair protein RadC n=4 Tax=Fusobacteriaceae... 145 4e-34 UniRef50_B1H050 DNA repair protein RadC n=1 Tax=uncultured Termi... 145 4e-34 UniRef50_C1A4H3 DNA repair protein RadC n=1 Tax=Gemmatimonas aur... 145 4e-34 UniRef50_Q4V1K6 Possible DNA repair protein n=7 Tax=Bacillus cer... 145 4e-34 UniRef50_Q8RF15 UPF0758 protein FN0909 n=11 Tax=Fusobacterium Re... 145 4e-34 UniRef50_A9BIK5 DNA repair protein RadC n=1 Tax=Petrotoga mobili... 145 5e-34 UniRef50_Q2QJL1 DNA repair protein RadC n=1 Tax=Acetobacter acet... 145 6e-34 UniRef50_Q03EP2 DNA repair protein n=1 Tax=Pediococcus pentosace... 144 6e-34 UniRef50_A6L552 DNA repair protein n=5 Tax=Bacteroidales RepID=A... 144 6e-34 UniRef50_B0MUL4 Putative uncharacterized protein n=1 Tax=Alistip... 144 7e-34 UniRef50_B8KU95 DNA repair protein RadC n=1 Tax=gamma proteobact... 144 8e-34 UniRef50_C0QCU0 RadC2 n=2 Tax=Desulfobacterium autotrophicum HRM... 144 9e-34 UniRef50_Q2GEH3 DNA repair protein RadC n=2 Tax=Neorickettsia Re... 144 1e-33 UniRef50_Q0FHF8 DNA repair protein RadC n=1 Tax=Roseovarius sp. ... 144 1e-33 UniRef50_C0R372 DNA repair protein RadC, putative n=11 Tax=Wolba... 142 2e-33 UniRef50_Q93MC6 DNA repair protein RadC n=1 Tax=Clostridium perf... 142 3e-33 UniRef50_C0GR82 DNA repair protein RadC n=2 Tax=Desulfonatronosp... 142 3e-33 UniRef50_C8N8A0 DNA repair protein RadC n=1 Tax=Cardiobacterium ... 142 3e-33 UniRef50_A9B8G6 DNA repair protein RadC n=1 Tax=Herpetosiphon au... 142 4e-33 UniRef50_A9NF52 DNA repair protein n=1 Tax=Acholeplasma laidlawi... 142 4e-33 UniRef50_B8J197 DNA repair protein RadC n=4 Tax=Desulfovibrio Re... 142 4e-33 UniRef50_Q4FQM6 UPF0758 protein Psyc_1834 n=3 Tax=Moraxellaceae ... 141 5e-33 UniRef50_Q0GNI5 Smu18B n=1 Tax=uncultured organism RepID=Q0GNI5_... 141 8e-33 UniRef50_C7GIB3 DNA repair protein RadC n=9 Tax=Bacteria RepID=C... 141 9e-33 UniRef50_A8RIH3 Putative uncharacterized protein n=2 Tax=Clostri... 141 1e-32 UniRef50_A1BGW3 DNA repair protein RadC n=2 Tax=Chlorobium RepID... 140 1e-32 UniRef50_A4XMN4 DNA repair protein RadC n=2 Tax=Caldicellulosiru... 140 2e-32 UniRef50_Q73P26 DNA repair protein RadC n=2 Tax=Treponema RepID=... 139 2e-32 Sequences not found previously or not previously below threshold: >UniRef50_A1B4F1 UPF0758 protein Pden_2304 n=44 Tax=Alphaproteobacteria RepID=Y2304_PARDP Length = 263 Score = 183 bits (466), Expect = 1e-45, Method: Composition-based stats. Identities = 66/158 (41%), Positives = 97/158 (61%), Gaps = 1/158 (0%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 + ++S L G Q+ ++++ A + L R TS A+ ++ MA E E+FR Sbjct: 107 LAEVSGL-GPAVLQELKIVEAAAQRLARSRVMHRPVLTSWDALLDYCHTAMAHGEIEQFR 165 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 VLYLD +N LIA E GT++ V+PRE+++RAL +A+A+IL HNHPSG+ TPSQAD Sbjct: 166 VLYLDRKNVLIADEEQARGTVDHVPVYPREIMRRALELSASALILVHNHPSGDPTPSQAD 225 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +T R+V +++ I V DHLI+G + SF GLL Sbjct: 226 IGMTNRIVAAAEVMGIAVHDHLIIGRSRELSFRSEGLL 263 >UniRef50_B0UUW7 UPF0758 protein HSM_0009 n=10 Tax=Pasteurellaceae RepID=Y009_HAES2 Length = 222 Score = 181 bits (460), Expect = 7e-45, Method: Composition-based stats. Identities = 66/151 (43%), Positives = 95/151 (62%), Gaps = 3/151 (1%) Query: 11 MTPQDRRLIQRALRALDRHLHEP---GVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQ 67 + +Q R+L + FTS VR +L+ + +RE F VL+LDNQ Sbjct: 72 LGITQFVQLQACTEMTKRYLLQELQFAQEFTSPDTVRMYLQTELENKDREIFMVLFLDNQ 131 Query: 68 NQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRL 127 ++LI E +F GTIN+ V+PRE++K AL NAAA+ILAHNHPSG +TPS AD+ +T+ + Sbjct: 132 HRLIKKEEMFLGTINQANVYPREIIKTALFCNAAALILAHNHPSGVSTPSMADRKMTENI 191 Query: 128 VQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 Q+ +L++IRV DH I+G +SFAE G + Sbjct: 192 KQLSELMEIRVLDHFIIGKGNYFSFAEQGWI 222 >UniRef50_B0T9F0 DNA repair protein RadC n=1 Tax=Caulobacter sp. K31 RepID=B0T9F0_CAUSK Length = 223 Score = 181 bits (459), Expect = 9e-45, Method: Composition-based stats. Identities = 66/157 (42%), Positives = 98/157 (62%) Query: 2 KQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRV 61 QL GE+ D +L++ A R + R TS V ++LR MA L REEF V Sbjct: 67 SQLHLAVGELAAMDLKLLREAARRVTRADLAQRQLLTSFSQVADYLRALMAGLPREEFWV 126 Query: 62 LYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADK 121 L+LD +NQL++ E L G+++ V+PREV++RAL N +A+ILAHNHPSG+ PSQ D Sbjct: 127 LFLDRRNQLLSAERLGVGSVDHAPVYPREVMRRALELNCSAMILAHNHPSGDPQPSQPDI 186 Query: 122 TLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +T+ L++ + + I++ DH+IV G + SF +GL+ Sbjct: 187 EMTKTLIEAGKALQIQIHDHMIVAGGAVVSFRANGLI 223 >UniRef50_C9L5T8 DNA repair protein RadC n=4 Tax=Clostridiales RepID=C9L5T8_RUMHA Length = 231 Score = 180 bits (457), Expect = 1e-44, Method: Composition-based stats. Identities = 48/160 (30%), Positives = 87/160 (54%), Gaps = 2/160 (1%) Query: 1 MKQLSFLPG--EMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREE 58 + QL + G ++ + I + + + G++F ++ ++ + E+E Sbjct: 72 LAQLQAVKGIGKVKAIQIKCIGELSKRIATATAKKGLSFRHPASIADYYMEQLRHEEQEL 131 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 + LD +N L+ E +F GT+N + +PRE+ A+ ++A ++L HNHPSG+ TPSQ Sbjct: 132 LICMMLDTKNHLLGDEMIFKGTVNSSLANPREIFLSAVSYHAVGILLVHNHPSGDCTPSQ 191 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 AD TQR+ + +L+ I + DH+I+G + SF E G+ Sbjct: 192 ADVDFTQRVKEAGELLGIPLLDHIIIGDCKYLSFREQGIF 231 >UniRef50_B1IPT7 DNA repair protein RadC n=3 Tax=Enterobacteriaceae RepID=B1IPT7_ECOLC Length = 159 Score = 179 bits (455), Expect = 3e-44, Method: Composition-based stats. Identities = 94/157 (59%), Positives = 121/157 (77%) Query: 2 KQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRV 61 +QL E+ P D++ +++AL L+ L E G +FTS+HAVR+WLRL +A+LEREEF Sbjct: 3 QQLPLFARELAPADQQTVRKALSLLECQLRETGASFTSSHAVRDWLRLQLASLEREEFTA 62 Query: 62 LYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADK 121 L+LDNQ++LIAHETLFTGTIN T+VHPREVVK L N AAVI+AH+HPSGE PS+AD+ Sbjct: 63 LFLDNQHRLIAHETLFTGTINHTQVHPREVVKAGLKHNCAAVIVAHSHPSGEAEPSKADR 122 Query: 122 TLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +T R+ Q L LVDIR+ DHL+VGG +I SFA+ G L Sbjct: 123 QVTTRIQQALDLVDIRLLDHLVVGGMEITSFADRGWL 159 >UniRef50_C8VVH2 DNA repair protein RadC n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VVH2_DESAS Length = 227 Score = 179 bits (455), Expect = 3e-44, Method: Composition-based stats. Identities = 49/160 (30%), Positives = 87/160 (54%), Gaps = 2/160 (1%) Query: 1 MKQLSFLPGEM--TPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREE 58 ++QL+ + G + + + + + + ++ M ++RE Sbjct: 68 VEQLAEVKGVGNSKALALKAAVEIGQRIAKTKAMECPSVKTPDDAVNYVMEEMRYMDREH 127 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 F+ L L+ +N++I+ E + GT+N + VHPRE+ K A+ +AAA+IL HNHPSG+ TPS+ Sbjct: 128 FKALLLNTKNRVISLEAISVGTLNSSNVHPRELFKVAIKRSAAAIILIHNHPSGDPTPSR 187 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D +T+RL + ++V I V DH+++G + S GL Sbjct: 188 EDIDVTERLGEAGKIVGIDVLDHIVIGDGKFVSLKAKGLF 227 >UniRef50_P52140 UPF0758 protein yfjY n=148 Tax=Enterobacteriaceae RepID=YFJY_ECOLI Length = 160 Score = 179 bits (454), Expect = 3e-44, Method: Composition-based stats. Identities = 118/157 (75%), Positives = 132/157 (84%) Query: 2 KQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRV 61 + L + +R ++RAL LDRHL E GVAFTST A R+WL+L MA LEREEF + Sbjct: 4 QSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMM 63 Query: 62 LYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADK 121 LYL+ QNQLIAHETLF G+I+ TEVHPREVVKRAL+FNAAAVILAHNHPSG+TTPSQADK Sbjct: 64 LYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADK 123 Query: 122 TLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 T+TQRLVQ LQLVDIRVPDHLIVGGRQIYSFAEHGLL Sbjct: 124 TITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL 160 >UniRef50_A6SWN0 DNA repair protein RadC n=14 Tax=Proteobacteria RepID=A6SWN0_JANMA Length = 190 Score = 178 bits (453), Expect = 4e-44, Method: Composition-based stats. Identities = 73/158 (46%), Positives = 110/158 (69%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 ++ S ++T D ++ RA+ LD H+ + G TS V+++LRL + +RE F Sbjct: 32 LRHWSEFLHDLTAVDTWIVHRAIEILDEHVIKHGPKLTSPKDVKDYLRLQLLNEKREVFA 91 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 V+++D Q++++A+E LF GTI++T V+PR +V+RA+ NAA++ILAHNHPSG T PS+AD Sbjct: 92 VVFMDTQHRVLAYEPLFFGTIHQTSVYPRAIVQRAMSLNAASMILAHNHPSGSTHPSEAD 151 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 K LT RL +L+ +D+RV DH I+G +SFAEHGLL Sbjct: 152 KQLTNRLKSLLESIDVRVLDHFIIGEEGTFSFAEHGLL 189 >UniRef50_B2FJW1 UPF0758 protein Smlt0399 n=129 Tax=Proteobacteria RepID=Y399_STRMK Length = 234 Score = 178 bits (453), Expect = 4e-44, Method: Composition-based stats. Identities = 70/158 (44%), Positives = 93/158 (58%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 + +L L + ++ A R L L + AV +L+ + RE F Sbjct: 68 LARLPGLGPARSCTLAAGLELAHRYLAAELEHGEAVGNNPAAVGRYLQHRLRGQAREVFM 127 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 L+LDN+++LIA E LF GTIN V+PREVV+RAL NAAAVIL+HNHPSG+ PS AD Sbjct: 128 ALFLDNRHRLIACEELFHGTINAAPVYPREVVRRALLHNAAAVILSHNHPSGDPEPSSAD 187 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +T L Q L +VD+R+ DH +VG + SFAE GLL Sbjct: 188 TRITDELQQALAMVDVRLLDHFVVGEGRPVSFAERGLL 225 >UniRef50_B5EXE3 UPF0758 protein yicR n=116 Tax=Enterobacteriaceae RepID=YICR_SALA4 Length = 221 Score = 178 bits (452), Expect = 6e-44, Method: Composition-based stats. Identities = 66/158 (41%), Positives = 93/158 (58%), Gaps = 2/158 (1%) Query: 3 QLSFLPGEMTP--QDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 Q + G + I R A S RE+L+ + ERE F Sbjct: 64 QFRGVNGIGLAKFAQLKGIAELARRYYSVRMNEESALLSPEMTREFLQSQLTGEEREIFL 123 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 V++LD Q++++ H LF+GT+N EVHPRE+V+ A+ NA+AVILAHNHPSG PS+AD Sbjct: 124 VIFLDAQHRVLQHSRLFSGTLNHVEVHPREIVREAIKLNASAVILAHNHPSGCAEPSKAD 183 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 K +T+R+++ Q +DIRV DHLI+G + SFAE G + Sbjct: 184 KLITERVIKCCQFMDIRVLDHLIIGRGEYVSFAERGWI 221 >UniRef50_Q2J299 UPF0758 protein RPB_0700 n=15 Tax=Alphaproteobacteria RepID=Y700_RHOP2 Length = 250 Score = 178 bits (451), Expect = 6e-44, Method: Composition-based stats. Identities = 62/153 (40%), Positives = 95/153 (62%), Gaps = 1/153 (0%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 ++++S L GE + +L+ A + + + +S AV ++ R MA +RE+FR Sbjct: 94 LREVSGL-GEAAITEIKLVAAAAARVTKGQVKSRTVLSSWSAVIDYCRTTMAFADREQFR 152 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 +L+LD +NQLIA E GT++ T V+PRE+VKRAL +A AVI+ HNHPSG+ TPSQAD Sbjct: 153 ILFLDKRNQLIADELQQVGTVDHTPVYPREIVKRALELSATAVIMVHNHPSGDPTPSQAD 212 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFA 153 +T+ +V + + + + V DH+IVG S Sbjct: 213 IQMTKTIVAIAEPLGVAVHDHIIVGKNGHASLK 245 >UniRef50_A9AE97 DNA repair protein n=8 Tax=Bacteria RepID=A9AE97_BURM1 Length = 169 Score = 178 bits (451), Expect = 7e-44, Method: Composition-based stats. Identities = 73/155 (47%), Positives = 94/155 (60%) Query: 4 LSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLY 63 L G I A R + + G FTS AV+++LR +A E E F VL+ Sbjct: 15 LRDSRGRYRQASADQILEAARQVIDQKMQRGDEFTSPAAVKDYLRAKLAGFEHEVFAVLF 74 Query: 64 LDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTL 123 LD +++LI + +F GTI+ EVHPREVVK AL NAAAVI++HNHPSG PS AD+ + Sbjct: 75 LDTRHRLIDYAEMFRGTIDSAEVHPREVVKEALRLNAAAVIISHNHPSGNPEPSAADRAM 134 Query: 124 TQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 T +L Q L LVD+R DH+IV G SFAE GL+ Sbjct: 135 TSQLRQALALVDVRTLDHIIVAGGTTTSFAERGLI 169 >UniRef50_C8WXL6 DNA repair protein RadC n=3 Tax=Alicyclobacillus acidocaldarius RepID=C8WXL6_ALIAD Length = 233 Score = 177 bits (450), Expect = 9e-44, Method: Composition-based stats. Identities = 43/160 (26%), Positives = 84/160 (52%), Gaps = 2/160 (1%) Query: 1 MKQLSFLPG--EMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREE 58 + +L +PG R + R + +++ + L++E Sbjct: 70 VAELLSVPGIGPAKAVQIAAAVELGRRVARKPPGEKRQIRTAEDAAKYVMDRLRYLKKEH 129 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 F L LD +++++A +T G+++ + VHPRE+ +RA+ +A++++ HNHPSG+ +PS Sbjct: 130 FVTLLLDTKHRVLAEDTSSVGSLDASIVHPREIFRRAIRISASSILCIHNHPSGDPSPSP 189 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D +T+RLV+ +++ I V DH+++G + S G L Sbjct: 190 EDIAVTKRLVEAGRVLGIEVLDHIVIGDGRFVSLRAEGYL 229 >UniRef50_D1JB12 Probable DNA repair protein radC homolog n=2 Tax=uncultured archaeon RepID=D1JB12_9ARCH Length = 330 Score = 177 bits (449), Expect = 1e-43, Method: Composition-based stats. Identities = 59/157 (37%), Positives = 91/157 (57%), Gaps = 2/157 (1%) Query: 4 LSFLPGEMTP--QDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRV 61 L + G + +Q + + ++ V ++L L M L+ E F+V Sbjct: 155 LMDIEGVGAAKVAQIKAVQALAEEYLKESMKSVSKVRNSKEVFDYLYLTMRDLKIEIFKV 214 Query: 62 LYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADK 121 ++LD+ NQ I E LF GT+N + V+PRE+VK A++ NAA++I HNHPSG+ TPS +D+ Sbjct: 215 IFLDSANQTIDDENLFEGTLNASSVYPREIVKSAVNKNAASLIFVHNHPSGDPTPSGSDR 274 Query: 122 TLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +T+ L+ LV I V DH+I+G +SFA+ GLL Sbjct: 275 AITEDLIYACNLVQITVLDHIIIGDNVYFSFADEGLL 311 >UniRef50_C8U0Q3 Predicted DNA repair protein n=21 Tax=Enterobacteriaceae RepID=C8U0Q3_ECO10 Length = 180 Score = 177 bits (449), Expect = 1e-43, Method: Composition-based stats. Identities = 87/148 (58%), Positives = 113/148 (76%) Query: 11 MTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQL 70 +TP +R I+RA+ LD++L +PG+AFTS+ A R+WLRLH+A ERE F VLYLDNQ++L Sbjct: 33 LTPYAQRTIRRAMNLLDKYLRQPGIAFTSSTAARDWLRLHLARQEREVFMVLYLDNQHRL 92 Query: 71 IAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQV 130 + ETLF G++N +VH REVVK AL FNAAAV+LAHNHPSG+ PSQ D+ +T RL + Sbjct: 93 LESETLFAGSVNHVQVHSREVVKSALRFNAAAVVLAHNHPSGDPEPSQCDRNITGRLKEA 152 Query: 131 LQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 L+LVD++ DHL+VG I SFAE G L Sbjct: 153 LELVDVKTLDHLVVGRDGIVSFAERGWL 180 >UniRef50_B3HA66 DNA repair protein RadC n=3 Tax=Enterobacteriaceae RepID=B3HA66_ECOLX Length = 157 Score = 177 bits (449), Expect = 1e-43, Method: Composition-based stats. Identities = 87/158 (55%), Positives = 114/158 (72%), Gaps = 1/158 (0%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 M +L P + ++R+I+RA+R L+++ PG +F S+ A + WL+LH+A ERE F Sbjct: 1 MSELMLTP-VFSVSEQRVIRRAMRLLEKYQRNPGESFLSSDATKTWLQLHLARQEREMFV 59 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 VLYLDNQN+L+ HETLF GTIN TEVHPRE+VK AL NAAAVILAHNHPSG PS+AD Sbjct: 60 VLYLDNQNRLLEHETLFLGTINSTEVHPREIVKSALRHNAAAVILAHNHPSGVAEPSRAD 119 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 + +T +V+ L LV++RV DH I+G + SFAE G L Sbjct: 120 RLITTNIVKTLDLVNVRVLDHFIIGAGDVLSFAERGWL 157 >UniRef50_Q8UEZ6 UPF0758 protein Atu1607 n=100 Tax=Alphaproteobacteria RepID=Y1607_AGRT5 Length = 280 Score = 176 bits (448), Expect = 1e-43, Method: Composition-based stats. Identities = 55/158 (34%), Positives = 91/158 (57%), Gaps = 1/158 (0%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 ++++ + GE D +L+ + + + S +V ++ MA RE+FR Sbjct: 124 LQEVKGV-GEAVALDLKLVASVSQRMLKSEIRNKQVLGSWSSVIDYCHAAMAHETREQFR 182 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 +L+LD +N LIA E GT++ T V+PRE+V+RAL ++ A+IL HNHPSG+ TPS+AD Sbjct: 183 ILFLDKRNVLIADEVQGQGTVDHTPVYPREIVRRALELSSTALILIHNHPSGDPTPSRAD 242 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +T+ ++ + + I V DH+I+G SF L+ Sbjct: 243 IEMTKTIIDTAKPLGITVHDHIIIGKDGHASFKGLRLI 280 >UniRef50_A9VIS8 UPF0758 protein BcerKBAB4_4299 n=107 Tax=Firmicutes RepID=Y4299_BACWK Length = 225 Score = 176 bits (448), Expect = 2e-43, Method: Composition-based stats. Identities = 51/160 (31%), Positives = 86/160 (53%), Gaps = 2/160 (1%) Query: 1 MKQLSFLPG--EMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREE 58 ++++ + G R + R ++ + S ++ M L++E Sbjct: 66 LEEMMSIHGVGIAKASQLMAAFELGRRMVRLEYQNRYSIRSPEDCASYMMEEMRFLQQEH 125 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 F LYL+ +NQ+I +T+F G++N + VHPREV K A AA++I HNHPSG+ PS+ Sbjct: 126 FVCLYLNTKNQVIHRQTIFIGSLNTSIVHPREVFKEAFRRAAASIICLHNHPSGDPAPSR 185 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D +T+RLV+ +++ I V DH+I+G + S E G + Sbjct: 186 EDIEVTKRLVECGRIIGIEVLDHIIIGDHKFVSLKEKGHI 225 >UniRef50_A7MQ95 UPF0758 protein ESA_04094 n=32 Tax=Bacteria RepID=Y4094_ENTS8 Length = 230 Score = 176 bits (447), Expect = 2e-43, Method: Composition-based stats. Identities = 69/150 (46%), Positives = 93/150 (62%) Query: 9 GEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQN 68 G + I R R A S R++L +A ERE F V++LD+QN Sbjct: 81 GMAKYAQLKAIGELARRYYRSRPCEETALLSPTITRDFLESQLAEQEREVFLVIFLDSQN 140 Query: 69 QLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLV 128 ++I TLFTGT++ EVHPRE+V+ A+ NAA +ILAHNHPSG PS+ADK +T+R+V Sbjct: 141 RIIRQNTLFTGTLSHVEVHPREIVREAVRLNAAGIILAHNHPSGRAEPSRADKMVTERIV 200 Query: 129 QVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 + QLVDIRV DHL++G + SFAE G + Sbjct: 201 KSCQLVDIRVLDHLVIGRGEYVSFAERGWI 230 >UniRef50_Q46A65 UPF0758 protein Mbar_A2303 n=2 Tax=Methanosarcinaceae RepID=Y2303_METBF Length = 229 Score = 176 bits (446), Expect = 3e-43, Method: Composition-based stats. Identities = 51/160 (31%), Positives = 88/160 (55%), Gaps = 2/160 (1%) Query: 1 MKQLSFLPG--EMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREE 58 + +L + G + + R L+ + EP S V + M ++E+ Sbjct: 69 VSRLMKVHGVGKAKAAQIAAVFELARRLETFVEEPKRKVCSPKDVYTLMYPKMREQKKEK 128 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 F L LD +NQ++ E + G++N + VHPREV K AL ++A+VI+ HNHPSG+ +PS+ Sbjct: 129 FITLCLDTKNQILKEEVVSIGSLNASIVHPREVFKSALMESSASVIMIHNHPSGDPSPSR 188 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D +T+++V+ +L+ I V DH+I+G + S + G + Sbjct: 189 EDIMVTEKMVEGGKLLGIDVLDHIIIGEGRYVSLKDEGFV 228 >UniRef50_A4W511 UPF0758 protein Ent638_0101 n=3 Tax=Enterobacteriaceae RepID=Y101_ENT38 Length = 221 Score = 176 bits (446), Expect = 3e-43, Method: Composition-based stats. Identities = 60/160 (37%), Positives = 93/160 (58%), Gaps = 2/160 (1%) Query: 1 MKQLSFLPGEMTP--QDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREE 58 + + ++ G + I R S +++L+ ++ ERE Sbjct: 62 LDEFRYVEGIGLAKYAQLKGIAELARRYHSVRVLGDNPLLSPEMTKDFLQSQLSDAEREV 121 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 F V++LDNQ++++ H +F+GT+ EVHPRE+V+ A+ NAAAVILAHNHPSG PS+ Sbjct: 122 FMVIFLDNQHRVVKHSRMFSGTLRHVEVHPREIVREAIKVNAAAVILAHNHPSGCAEPSK 181 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 ADK +T+R+++ Q +DI V DH I+G + SFAE G + Sbjct: 182 ADKDITERIIKCCQFMDIHVLDHFIIGRGEYVSFAEQGWI 221 >UniRef50_Q3A8G4 UPF0758 protein Pcar_0065 n=2 Tax=Bacteria RepID=Y065_PELCD Length = 227 Score = 175 bits (445), Expect = 4e-43, Method: Composition-based stats. Identities = 53/159 (33%), Positives = 86/159 (54%), Gaps = 2/159 (1%) Query: 2 KQLSFLPG--EMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEF 59 +L + G + + + R R+ PG +TS AV + +RE F Sbjct: 69 SELQAIKGIGPAKAAELQAVFELARRFGRNPLRPGDRYTSPQAVFAHFHERLRDHKRERF 128 Query: 60 RVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQA 119 L LD++N+L+ + G++ + VHPR+V + +AAAV+ HNHPSG+ +PS+ Sbjct: 129 IALLLDSKNRLLREVGISEGSLTASIVHPRDVFAPVVRESAAAVLFVHNHPSGDPSPSRE 188 Query: 120 DKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D +TQRL +V +L+ +RV DH+I+G S A+ G+L Sbjct: 189 DLDITQRLREVGELMGVRVLDHIIIGDEGYVSLADRGVL 227 >UniRef50_C4Z083 DNA repair protein RadC n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z083_EUBE2 Length = 230 Score = 175 bits (445), Expect = 4e-43, Method: Composition-based stats. Identities = 43/160 (26%), Positives = 81/160 (50%), Gaps = 2/160 (1%) Query: 1 MKQLSFLPG--EMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREE 58 + +L + G + I R + + + F++ + + M LE+E Sbjct: 70 VSELMQIKGIGKAKAVQICCILELSRRIAKQKARERLDFSNAETIAGYYMEDMRHLEKEH 129 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 ++ LDN+ +LI + L GT + V RE+ K AL AA+V+L HNHPSG +PS+ Sbjct: 130 LVLVMLDNRCRLIRDKVLSVGTSTGSMVSVREIFKEALDNRAASVVLLHNHPSGNPSPSR 189 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D +T+ +++ +++ I + DH+++G +SF + + Sbjct: 190 EDMKVTRSVMEAGKIIGIELLDHIVIGDNSYFSFKQMQYI 229 >UniRef50_Q2LSS5 DNA repair protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LSS5_SYNAS Length = 308 Score = 173 bits (440), Expect = 1e-42, Method: Composition-based stats. Identities = 55/160 (34%), Positives = 92/160 (57%), Gaps = 2/160 (1%) Query: 1 MKQLSFLPGEMT--PQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREE 58 +++L+ + G R+++ + + T + ++ + + L+ E Sbjct: 147 LEELTAVRGISAHAAGLVRMVKEMSALYLQEKAREKPQISCTGELLDFCKTALGGLKDEN 206 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 F VLYLD QN++IA ET+ G +N+ V+PR+V++RAL ++A+IL HNHPSG PS Sbjct: 207 FCVLYLDTQNRIIAFETIQKGIVNQAVVYPRQVIERALSHKSSALILVHNHPSGFVKPSD 266 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 AD LT+ + +L+DI V DHLI+G + +SF E G++ Sbjct: 267 ADIRLTRTITDTAKLLDIMVHDHLIIGENRFFSFREEGIM 306 >UniRef50_Q46XP0 UPF0758 protein Reut_A2732 n=12 Tax=Proteobacteria RepID=Y2732_RALEJ Length = 228 Score = 173 bits (440), Expect = 1e-42, Method: Composition-based stats. Identities = 70/150 (46%), Positives = 96/150 (64%) Query: 9 GEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQN 68 GE + + R + E S AVR +LRL +A L +E F L+LD +N Sbjct: 75 GEAKYTQLQAVPELARRMLAESLELPSGLDSPAAVRSYLRLTLAPLAQEVFVCLFLDTRN 134 Query: 69 QLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLV 128 ++IA E LF GT+N+T V+PREV +RAL NAA+VI+AHNHPSG TPSQ+D +T+ L Sbjct: 135 RMIASEELFRGTLNQTAVYPREVARRALAHNAASVIVAHNHPSGCCTPSQSDLQMTRMLA 194 Query: 129 QVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 + L L+D+R+ DH +V G ++SFAEHG L Sbjct: 195 RALDLIDVRLLDHFVVAGTHVHSFAEHGEL 224 >UniRef50_C9Y8Q3 DNA repair protein radC homolog n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y8Q3_9BURK Length = 239 Score = 173 bits (439), Expect = 2e-42, Method: Composition-based stats. Identities = 77/158 (48%), Positives = 103/158 (65%), Gaps = 1/158 (0%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 +K + L + +++ A RA+ + L + F AV+ +L+LH+AA E F Sbjct: 83 LKHVKGLGPAKRAEIVAVLELARRAMAQRL-QEREVFADPQAVKHYLQLHLAAKGHEVFA 141 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 VL+LD+QN+L+A E LF GT+ +T V+PREVV RALH AAAV+LAHNHPSG PS+AD Sbjct: 142 VLFLDSQNKLLAMEELFRGTLTQTSVYPREVVIRALHHGAAAVVLAHNHPSGSVQPSRAD 201 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 + LTQ L L LVD+RV DH+IVG Q S AE GL+ Sbjct: 202 EALTQTLKAALALVDVRVLDHIIVGPGQALSMAETGLI 239 >UniRef50_B5YIR9 DNA repair protein n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIR9_THEYD Length = 224 Score = 173 bits (438), Expect = 2e-42, Method: Composition-based stats. Identities = 51/160 (31%), Positives = 86/160 (53%), Gaps = 3/160 (1%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHL--HEPGVAFTSTHAVREWLRLHMAALEREE 58 + +L G + I+ + R L F S V + + L++E Sbjct: 66 ISELKSFKG-LGIAKIAQIKASFELGKRALCEKSQEQFFNSAEIVYNYFFPKLNGLKKEV 124 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 F L LD + +LI + GT+N++ +HPREV K A+ +A AVIL HNHPSG+ TPS+ Sbjct: 125 FITLLLDTKLRLIREVKVSEGTLNQSLIHPREVFKDAVKESAYAVILIHNHPSGDPTPSE 184 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D +T++L + ++++I + DH+I+G + +S E G++ Sbjct: 185 QDIEITKKLKKASEILEIPILDHVIIGSGKYFSMKERGVV 224 >UniRef50_C5V0A3 DNA repair protein RadC n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V0A3_9PROT Length = 205 Score = 173 bits (438), Expect = 2e-42, Method: Composition-based stats. Identities = 69/147 (46%), Positives = 93/147 (63%) Query: 12 TPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLI 71 + +RAL + + + + V+++L+L + ++E F VL+LD Q++LI Sbjct: 59 AAIISAAKELVMRALSEDITQNPINLNNPVEVKKYLKLLLGGRQQEVFVVLFLDTQHRLI 118 Query: 72 AHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVL 131 A E LF GT+ +T V+PREVVKRAL NAAAV+LAHNHPSG PSQAD+ LT L Q L Sbjct: 119 AAEELFHGTLTQTSVYPREVVKRALMHNAAAVLLAHNHPSGLAEPSQADQLLTNALKQAL 178 Query: 132 QLVDIRVPDHLIVGGRQIYSFAEHGLL 158 LVD+R DH I+G SFAE GL+ Sbjct: 179 ALVDVRALDHFIIGDESALSFAERGLI 205 >UniRef50_B3E339 UPF0758 protein Glov_0523 n=8 Tax=Desulfuromonadales RepID=Y523_GEOLS Length = 230 Score = 173 bits (438), Expect = 3e-42, Method: Composition-based stats. Identities = 53/161 (32%), Positives = 85/161 (52%), Gaps = 4/161 (2%) Query: 1 MKQLSFLPGEMTPQDRRLIQRAL---RALDRHLHEPGVAFTSTHAVREWLRLHMAALERE 57 + +L + G + I+ A + E FTS V ++ + +E Sbjct: 71 LNELQQIKG-LGLAKAASIKAAFTLGKRFQARRLETLERFTSPAQVFDFFHHELRDNRKE 129 Query: 58 EFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPS 117 F L LD +N++ + G++N++ VHPREV A+ +AAAVI HNHPSG+ PS Sbjct: 130 LFLTLLLDGKNRITRKVQVSEGSLNQSIVHPREVFAPAVRESAAAVIFIHNHPSGDPAPS 189 Query: 118 QADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 + D +T+RL + +++ I+V DH+I+G +SF E GLL Sbjct: 190 REDHEITRRLNEAGEILGIKVLDHIIIGDGAYFSFVESGLL 230 >UniRef50_A8R890 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8R890_9FIRM Length = 227 Score = 172 bits (437), Expect = 3e-42, Method: Composition-based stats. Identities = 52/160 (32%), Positives = 88/160 (55%), Gaps = 2/160 (1%) Query: 1 MKQLSFLPGE--MTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREE 58 + +L + G + + + + + + A +S + EWL + ++E Sbjct: 65 LTELMEIDGIKQAKAIELQAAFALGKRIAFDVLKESEAISSPQKLSEWLMQQIGFQQQEH 124 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 F V++L+ +NQ++A++TLF GT+ VHPRE+ K A+ A +I AHNHPSG S Sbjct: 125 FLVVFLNQRNQILAYKTLFVGTLTSANVHPREIFKEAMRIGCAKIICAHNHPSGNPQVSD 184 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 AD +TQ++++ QLV I + DH++VGG + S E G + Sbjct: 185 ADIAITQQIMECGQLVSIPLLDHIVVGGNRYVSLREEGYM 224 >UniRef50_C6DAT0 DNA repair protein RadC n=5 Tax=Enterobacteriaceae RepID=C6DAT0_PECCP Length = 157 Score = 172 bits (437), Expect = 3e-42, Method: Composition-based stats. Identities = 75/153 (49%), Positives = 103/153 (67%) Query: 6 FLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLD 65 L G + +++R+IQ AL L++ + + F ++ + WL L ++ LERE F VLYLD Sbjct: 5 SLAGRVASREQRIIQMALCLLEKRVRKNARQFKTSEDTKSWLMLELSNLEREVFMVLYLD 64 Query: 66 NQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQ 125 NQ++LI E + G IN TEVHPRE++K +L NAAAVILAHNHPSG PSQAD+ +T Sbjct: 65 NQHRLIEKEVIALGGINSTEVHPREILKASLRHNAAAVILAHNHPSGWAEPSQADRNITD 124 Query: 126 RLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 RL L +D++V DHL+VG ++ SFAE G L Sbjct: 125 RLKDSLSQLDVKVLDHLVVGSTEVVSFAERGWL 157 >UniRef50_C7RDS9 DNA repair protein RadC n=3 Tax=Anaerococcus RepID=C7RDS9_ANAPD Length = 228 Score = 172 bits (437), Expect = 3e-42, Method: Composition-based stats. Identities = 55/161 (34%), Positives = 91/161 (56%), Gaps = 3/161 (1%) Query: 1 MKQLSFLPGEMTPQDRRLI---QRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALERE 57 +K+L+ + G + R++ Q R +R L + TS+ V + + ++ L++E Sbjct: 68 VKELTDIKGIKQAKATRVVAGLQLGKRINERVLDKKIEKITSSKDVYDIMSPRLSNLKKE 127 Query: 58 EFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPS 117 F + LD++N +IA E + G + T V+PREV K A+ +A ++IL HNHPSG PS Sbjct: 128 YFYAILLDSKNVIIAKEVISIGDLGSTVVNPREVFKPAIKKSAKSMILVHNHPSGNPKPS 187 Query: 118 QADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D +T RL + ++DI+V DH+++G YSF + G L Sbjct: 188 TEDFLITDRLAEAGDILDIKVLDHIVIGNSSYYSFKKEGNL 228 >UniRef50_A1UT15 DNA repair protein, RadC family n=3 Tax=Bartonella RepID=A1UT15_BARBK Length = 265 Score = 172 bits (437), Expect = 3e-42, Method: Composition-based stats. Identities = 59/158 (37%), Positives = 89/158 (56%), Gaps = 1/158 (0%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 ++++ G + D ++I R F+S V + + MA RE+FR Sbjct: 109 LQEIEGC-GPASAIDLKIISAVAGRFARAQLSKRDIFSSWDKVLAYCKAVMAHETREQFR 167 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 +L+LD ++ L++ E TGTI+RT V+PREVV RAL +A+ +IL HNHPSG+ +PSQ D Sbjct: 168 ILFLDKKHGLLSDEVQQTGTIDRTPVYPREVVSRALELSASGIILVHNHPSGDASPSQED 227 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 ++T RL V +DI + DHLI+ SF L+ Sbjct: 228 ISMTYRLKDVANALDITLHDHLIIARNDYISFKALKLI 265 >UniRef50_C6LCB9 DNA repair protein RadC n=3 Tax=Clostridiales RepID=C6LCB9_9FIRM Length = 231 Score = 172 bits (436), Expect = 3e-42, Method: Composition-based stats. Identities = 50/150 (33%), Positives = 84/150 (56%) Query: 9 GEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQN 68 G++ + I R + + + G FTS A+ ++ L++E +L D + Sbjct: 81 GKVKAVQIQCITELSRRIAKSVASEGNTFTSAQAIADYYMEDFRHLQQERVFLLSFDTKG 140 Query: 69 QLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLV 128 +L++ +T+ GT+N++ V PRE+ AL A VIL HNHPSG PS D+ LT R+ Sbjct: 141 ELLSEKTISVGTVNQSCVSPREIFLEALSCRAVYVILLHNHPSGNPQPSPEDRLLTMRVH 200 Query: 129 QVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 + +L++I + DH+I+G R+ +SF E G + Sbjct: 201 ESGKLLEIPLMDHIILGDRRYFSFREEGFI 230 >UniRef50_Q1AVT6 UPF0758 protein Rxyl_1530 n=3 Tax=Bacteria RepID=Y1530_RUBXD Length = 227 Score = 172 bits (436), Expect = 4e-42, Method: Composition-based stats. Identities = 58/158 (36%), Positives = 88/158 (55%), Gaps = 2/158 (1%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 +KQ+ + GE R L + +S V LR +A L+RE F Sbjct: 72 LKQVKGI-GEAKACILLAALELARRLSVARNPGRPVISSPADVDGLLRGRIANLDREHFV 130 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 V+ L+ +N++I T+ GT++ + VHPREV K A+ +AA+V+LAHNHPSG PS+ D Sbjct: 131 VVLLNTKNEVIEAPTISVGTLSSSLVHPREVFKPAIRASAASVVLAHNHPSGRVEPSRED 190 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 + +T R+ + ++ I V DH+IVG +S EHG+L Sbjct: 191 REVTGRVAEAGGIIGIEVLDHVIVGEG-YFSMKEHGML 227 >UniRef50_A6TQH8 UPF0758 protein Amet_2289 n=54 Tax=cellular organisms RepID=Y2289_ALKMQ Length = 232 Score = 171 bits (435), Expect = 6e-42, Method: Composition-based stats. Identities = 52/161 (32%), Positives = 86/161 (53%), Gaps = 4/161 (2%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGV---AFTSTHAVREWLRLHMAALERE 57 +++L + G + I A+ R V S V L M L++E Sbjct: 73 IEELQQIKG-VGIAKASQILAAVELGKRISLTSRVNHYRIKSPDDVSNLLMEEMRYLKKE 131 Query: 58 EFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPS 117 F + L+ ++++IA E + G++N + VHPREV A+ +++A+IL HNHPSG+ +PS Sbjct: 132 YFNIALLNTKHEVIAIENISIGSLNASIVHPREVFVVAIKRSSSAIILVHNHPSGDPSPS 191 Query: 118 QADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D +T+RLV+ +L+ I V DH+I+G YS E ++ Sbjct: 192 GEDIRITKRLVEAGKLLGIEVLDHIIIGDNVYYSLKEKSMM 232 >UniRef50_A7FEQ9 DNA repair protein, RadC family n=4 Tax=Yersinia RepID=A7FEQ9_YERP3 Length = 162 Score = 171 bits (434), Expect = 7e-42, Method: Composition-based stats. Identities = 75/145 (51%), Positives = 99/145 (68%) Query: 14 QDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAH 73 +++I +AL L+ L TS AV+ WL+LH+ RE F VL+LDN+++L+A Sbjct: 16 AQQQIISQALAILEIQLRHRPYTLTSPEAVKAWLQLHLRPQGRECFMVLFLDNRHRLMAS 75 Query: 74 ETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQL 133 ET+ GT N T V+PREVV RALH AAV++AHNHP+G+ TPSQAD+TLT +LV L + Sbjct: 76 ETVSVGTFNATTVYPREVVIRALHHRCAAVVIAHNHPAGDPTPSQADRTLTAQLVNALNM 135 Query: 134 VDIRVPDHLIVGGRQIYSFAEHGLL 158 VDIRV DHLI+G + S AE G L Sbjct: 136 VDIRVLDHLIIGESEPVSLAELGWL 160 >UniRef50_A5KLJ1 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=A5KLJ1_9FIRM Length = 233 Score = 171 bits (433), Expect = 9e-42, Method: Composition-based stats. Identities = 44/160 (27%), Positives = 79/160 (49%), Gaps = 2/160 (1%) Query: 1 MKQLSFLPG--EMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREE 58 + +L + G ++ + + L R + F+S + ++ M RE Sbjct: 72 LDELIQIKGIGKVKAIQLVCLSELSKRLARTSTVGKLDFSSPRTIADYYMEDMRHRTREI 131 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 ++++L+ + +LI + GTI+ V PRE+ A NA +IL HNHP G+ TPS+ Sbjct: 132 LKLIFLNTRCRLIGECNVSEGTIDSALVSPRELFIEAFKRNAYGIILLHNHPGGDPTPSR 191 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D +T+R+ + +L+ IR+ DH+++G S E G Sbjct: 192 EDVMITRRIYEAGELLGIRLFDHIVIGDNCFVSMKEKGFF 231 >UniRef50_A6QHJ5 UPF0758 protein NWMN_1555 n=52 Tax=Staphylococcus RepID=Y1555_STAAE Length = 228 Score = 171 bits (433), Expect = 9e-42, Method: Composition-based stats. Identities = 49/160 (30%), Positives = 77/160 (48%), Gaps = 2/160 (1%) Query: 1 MKQLSFLPGEM--TPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREE 58 + L + G + + R + T V +++ M L +E Sbjct: 65 INDLIKVKGIGLQKAITLKAAFELGERMGRRAENNRIKITQPSDVADYMIPTMKDLTQEH 124 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 F +L L+++N +I +F GT+N + VHPRE+ A+ NA A+I HNHPSG+ TPSQ Sbjct: 125 FVILLLNSKNVVIKETCVFKGTLNSSIVHPREIFSIAVRENANAIIAVHNHPSGDVTPSQ 184 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D T RL + ++ I + DH+I+G + S E G Sbjct: 185 EDIITTMRLKECGLILGIDLLDHIIIGDNRFTSLVEAGYF 224 >UniRef50_Q04B84 DNA repair protein n=2 Tax=Lactobacillus delbrueckii subsp. bulgaricus RepID=Q04B84_LACDB Length = 204 Score = 170 bits (431), Expect = 1e-41, Method: Composition-based stats. Identities = 54/156 (34%), Positives = 84/156 (53%), Gaps = 1/156 (0%) Query: 4 LSFLPGEMTPQDRRL-IQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVL 62 L + G P D L I+ A+ L R + + + +L + ++E+F VL Sbjct: 49 LDYASGPDCPNDLSLTIEVAMDRLRRTDMRRSSDWAGSSKIGNYLANKLLGQKQEQFWVL 108 Query: 63 YLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKT 122 Y D Q L+ + LF GT++R+ VHPRE+ + A+ + A++I+AHNHPSG TPS D Sbjct: 109 YFDQQQNLLGEKMLFQGTLDRSWVHPREIFRWAVVYGCASIIVAHNHPSGALTPSDNDLE 168 Query: 123 LTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 LT+ L + +++ I DH I+GG + S E L Sbjct: 169 LTKGLKKASKIMKITFLDHFIIGGGEYLSLRERELF 204 >UniRef50_A5ZRS6 Putative uncharacterized protein n=5 Tax=Clostridiales RepID=A5ZRS6_9FIRM Length = 236 Score = 170 bits (431), Expect = 1e-41, Method: Composition-based stats. Identities = 49/158 (31%), Positives = 82/158 (51%), Gaps = 1/158 (0%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 +K++ + G + + I + + + F S ++ + + E+E Sbjct: 75 LKKIHGI-GTVKAVQLKCIGELSKRIASTAARISLDFNSPDSIAAYYMEQLRHQEQEIMI 133 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 + LDNQN L+ L GT+N T + PREV AL ++A +IL HNHP G PS+ D Sbjct: 134 CMMLDNQNHLLGDTMLSKGTVNATLITPREVYLEALRYHAVNLILIHNHPGGNPAPSKCD 193 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 K +T+R+ Q +++ I + DH+I+G + SF E GL+ Sbjct: 194 KEITERICQAGEMLGINLLDHIIIGDHRYISFREEGLM 231 >UniRef50_A5UDB6 UPF0758 protein CGSHiEE_07200 n=30 Tax=Gammaproteobacteria RepID=Y7200_HAEIE Length = 221 Score = 170 bits (431), Expect = 2e-41, Method: Composition-based stats. Identities = 64/150 (42%), Positives = 89/150 (59%) Query: 9 GEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQN 68 G + I + + V+ +L + ERE F VL+LDNQ+ Sbjct: 72 GITQFIQLQAITEMTKRYLKQEMLSTPIINDPETVKLFLLTELQHEEREVFMVLFLDNQH 131 Query: 69 QLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLV 128 +LI E LF GTIN + V+PRE++K AL+ NAAA+ILAHNHPSG T PS +D+ +T+++ Sbjct: 132 RLIKKERLFLGTINVSAVYPREIIKEALYCNAAALILAHNHPSGVTEPSYSDQLITKKIQ 191 Query: 129 QVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +L++I V DHLIVG YSFAE+ LL Sbjct: 192 DAAELMEICVLDHLIVGKSDCYSFAENCLL 221 >UniRef50_D0MFA0 DNA repair protein RadC n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MFA0_RHOM4 Length = 245 Score = 169 bits (430), Expect = 2e-41, Method: Composition-based stats. Identities = 51/161 (31%), Positives = 82/161 (50%), Gaps = 4/161 (2%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEP---GVAFTSTHAVREWLRLHMAALERE 57 +K+L+ + G + P + A R + + + V + L+RE Sbjct: 85 LKELTRVAG-VGPAKAVQLVAAFEIGRRVEAQRPGRRIQVRTPADVAACYGPLLRDLKRE 143 Query: 58 EFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPS 117 F+++ L+ N +IA T+ G + + V PR V +RA+ NAA +I HNHPSG PS Sbjct: 144 VFKIVLLNTANYIIADYTISEGGLAASIVEPRAVFQRAILDNAAGIICLHNHPSGNPEPS 203 Query: 118 QADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D +T++LV+ +L+ I V DH+I+ G S AE GL+ Sbjct: 204 AEDIRITRQLVEAGRLLGIPVHDHIIIAGTTYTSLAERGLM 244 >UniRef50_A4J365 DNA repair protein RadC n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J365_DESRM Length = 231 Score = 169 bits (429), Expect = 2e-41, Method: Composition-based stats. Identities = 51/159 (32%), Positives = 83/159 (52%), Gaps = 2/159 (1%) Query: 2 KQLSFLPG--EMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEF 59 ++L PG + L + ++ L++E F Sbjct: 73 EELMTYPGIGPSMAARLMAAFALTKKLASAGASENTVIRCPEDIFYLMKNEAKLLDKEYF 132 Query: 60 RVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQA 119 L L+ +N +I ET+ GT+N + VHPRE+ K+A+ +AAAVIL HNHPSG+ TPS+ Sbjct: 133 SALLLNTKNHVIGKETISIGTLNSSMVHPRELFKQAIRRSAAAVILVHNHPSGDPTPSRE 192 Query: 120 DKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D +LT+RL++ +++ I V DH+++G + S GL+ Sbjct: 193 DISLTKRLIEAGEIIGIDVLDHIVLGFDKFTSLKSKGLI 231 >UniRef50_C5SDF8 DNA repair protein RadC n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SDF8_CHRVI Length = 167 Score = 169 bits (429), Expect = 2e-41, Method: Composition-based stats. Identities = 69/145 (47%), Positives = 96/145 (66%) Query: 14 QDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAH 73 +R L+ A+ L+RH A TS A R++L+L + L E F VL LDN+++++ + Sbjct: 23 TERTLVAEAIDCLERHYRVAQEALTSPDATRDYLKLRLYGLTYEVFAVLLLDNRHRVLRY 82 Query: 74 ETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQL 133 + LF GTI+ VHPREVV+ + AAAVI AHNHPSG + PSQAD+TLT++L L L Sbjct: 83 QELFRGTIDTAYVHPREVVRLVIESGAAAVIFAHNHPSGSSDPSQADRTLTRKLQDALAL 142 Query: 134 VDIRVPDHLIVGGRQIYSFAEHGLL 158 +++RV DH+IVG + SFAE G L Sbjct: 143 IEVRVLDHIIVGEGRGMSFAEQGWL 167 >UniRef50_Q4UPP0 UPF0758 protein XC_3944 n=35 Tax=Proteobacteria RepID=Y3944_XANC8 Length = 225 Score = 169 bits (429), Expect = 2e-41, Method: Composition-based stats. Identities = 73/160 (45%), Positives = 100/160 (62%), Gaps = 4/160 (2%) Query: 2 KQLSFLPGEMTPQDRRLIQRALRALDRHLH---EPGVAFTSTHAVREWLRLHMAALEREE 58 K L+ LPG + P + AL +RHL E G A + +V + + A E Sbjct: 66 KALARLPG-LGPASACKLSAALELANRHLLSDLERGEALSDPSSVGRYFSQRLRARNYEV 124 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 F L+LD++++ IA E LFTGTI+ E+HPREVV+RAL NAAAV++ HNHPSG PS+ Sbjct: 125 FAALFLDSRHRAIAFEELFTGTIDAAEIHPREVVRRALLHNAAAVVVGHNHPSGNPEPSE 184 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 AD+ +TQRL+Q L LVDIR+ DH ++G + S AE G + Sbjct: 185 ADRAVTQRLLQALGLVDIRLLDHFVIGDGRPVSLAERGWV 224 >UniRef50_Q38XC8 UPF0758 protein LCA_0852 n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=Y852_LACSS Length = 224 Score = 169 bits (428), Expect = 3e-41, Method: Composition-based stats. Identities = 54/158 (34%), Positives = 83/158 (52%), Gaps = 1/158 (0%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 ++Q+ + G + + + I R + S+ V + + +A +E+ Sbjct: 66 LRQIEGI-GPVKAIELQAICELSRRIQNQRTLRFGVVASSQMVGQRMIESLAGETQEQLL 124 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 +YLD +NQ+I + L+ GT+N + HPREV K A+ ++AA IL HNHPSG+ PS D Sbjct: 125 AVYLDVKNQIIQIKQLYLGTLNSSVAHPREVFKWAVQYSAAKFILVHNHPSGQLAPSTQD 184 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 T+R+V QL+ I DHLI+G Q S E G L Sbjct: 185 INFTKRIVNCGQLMGITCLDHLIIGSSQYLSLREEGYL 222 >UniRef50_B1YJT0 DNA repair protein RadC n=2 Tax=Exiguobacterium RepID=B1YJT0_EXIS2 Length = 217 Score = 169 bits (428), Expect = 4e-41, Method: Composition-based stats. Identities = 53/158 (33%), Positives = 85/158 (53%), Gaps = 4/158 (2%) Query: 4 LSFLPGEMTPQDRRLIQRALRALDRHLHEP---GVAFTSTHAVREWLRLHMAALEREEFR 60 L PG + + I L R + EP S E L M ++E F Sbjct: 61 LEKAPGVGKAKALQ-IMAGLELGRRLVTEPKWVRPVVRSPDDAAELLMEEMRLYQQEHFI 119 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 LYL+ +N++I+ +TLF G +N + VHPR++ + A+ +AA+ I HNHPSG+ TPS+ D Sbjct: 120 CLYLNTKNEVISKKTLFIGGLNTSIVHPRDIFREAIRCSAASFIAVHNHPSGDPTPSRED 179 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +++R+V+ +L+ I DHL++G Q S + G + Sbjct: 180 IEVSERMVEAGRLIGISCIDHLVIGHGQFISMKQRGFM 217 >UniRef50_Q2G8R8 DNA repair protein RadC n=5 Tax=Sphingomonadales RepID=Q2G8R8_NOVAD Length = 245 Score = 168 bits (427), Expect = 4e-41, Method: Composition-based stats. Identities = 53/150 (35%), Positives = 89/150 (59%) Query: 9 GEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQN 68 GE + R++ A R L R + ++ A+ ++L + MA L E RVLYL++QN Sbjct: 96 GETSAAALRIVALAARRLARTVVREQPILSNWQALLDYLHIDMAHLTVERVRVLYLNSQN 155 Query: 69 QLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLV 128 LI + GT++ + ++ REV+++A+ AAA+IL HNHPSG PS+AD +TQ+++ Sbjct: 156 MLILDHLVSEGTLDESPIYTREVIRKAMDVGAAAMILVHNHPSGSPKPSRADIQVTQKVM 215 Query: 129 QVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 + +L+ + V DH+++G S GL+ Sbjct: 216 EAARLMGMTVHDHIVIGREGHTSLKAQGLI 245 >UniRef50_C5SK46 DNA repair protein RadC n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SK46_9CAUL Length = 244 Score = 168 bits (427), Expect = 4e-41, Method: Composition-based stats. Identities = 55/146 (37%), Positives = 87/146 (59%) Query: 13 PQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIA 72 D +L+ A R L + +S A+ +LR+ +A RE+FR+L+LD +NQLIA Sbjct: 99 ALDLQLMFEATRRLMAEPLKRSTVISSWQALLSYLRVTLAHEPREQFRLLFLDKKNQLIA 158 Query: 73 HETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQ 132 E + GT++ +PRE+++RAL +A++VIL HNHPSG+ PSQ D +T+ + + Sbjct: 159 DEIMNYGTVDHAPAYPREIMRRALELSASSVILVHNHPSGDPMPSQGDIDMTKANIAAGK 218 Query: 133 LVDIRVPDHLIVGGRQIYSFAEHGLL 158 + I + DHLIVG + S + G + Sbjct: 219 PLKIAIHDHLIVGREGVLSMKQVGAI 244 >UniRef50_B9Y7M6 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y7M6_9FIRM Length = 228 Score = 168 bits (427), Expect = 4e-41, Method: Composition-based stats. Identities = 58/160 (36%), Positives = 88/160 (55%), Gaps = 2/160 (1%) Query: 1 MKQLSFLPGEMTPQDRRLIQ--RALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREE 58 +K+L + G + ++ R + + A+ WL + ++E Sbjct: 68 LKELMQIKGISQVRGLEILACFELARRISEEQTREIDVVANPDALMAWLGREIGGKQQEH 127 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 F +YLD +N ++ H LF GT++ + VHPREV K AL +A V++ HNHPS + TPS Sbjct: 128 FLAIYLDAKNHILEHRLLFKGTLDASIVHPREVFKEALLASACRVLVVHNHPSQDLTPSL 187 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 AD+ +TQRL + +L+ I + DHLIVG Q +SF HGLL Sbjct: 188 ADRIITQRLKETGELIGIELLDHLIVGTTQYFSFRAHGLL 227 >UniRef50_Q0AJV4 DNA repair protein RadC n=18 Tax=Proteobacteria RepID=Q0AJV4_NITEC Length = 167 Score = 168 bits (426), Expect = 5e-41, Method: Composition-based stats. Identities = 67/145 (46%), Positives = 97/145 (66%) Query: 14 QDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAH 73 QD R+IQ+A+ L+ + + G AVR++LRL + A E F ++L++Q+Q++A Sbjct: 22 QDDRIIQQAIALLEHRVFKAGPTLDGPKAVRDYLRLKLMAEPNEVFVAVFLNSQHQVLAC 81 Query: 74 ETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQL 133 E LF GT++ V+PR VV+RAL NA+A+I +H HPSG PS AD+ +T RL +L + Sbjct: 82 ECLFKGTVSEASVYPRVVVQRALELNASALIFSHQHPSGVAEPSMADRAITNRLKFILSM 141 Query: 134 VDIRVPDHLIVGGRQIYSFAEHGLL 158 +DIRV DH I+G + YSFAE GLL Sbjct: 142 IDIRVVDHFIIGKGEPYSFAESGLL 166 >UniRef50_B9E733 DNA repair protein RadC homolog n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E733_MACCJ Length = 223 Score = 168 bits (426), Expect = 5e-41, Method: Composition-based stats. Identities = 53/160 (33%), Positives = 86/160 (53%), Gaps = 4/160 (2%) Query: 2 KQLSFLPG---EMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREE 58 ++L + G + +I+ A+R + H E + S L + + +E Sbjct: 65 QELITIKGIGQKKAAMILAIIELAIR-MHTHTKETRIKVKSPACAANLLMERLRYMTQEH 123 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 F VL L+ +N ++ T+F G++N + VHPREV K A+ +AAA+I+ HNHPSG+ PS Sbjct: 124 FIVLSLNTKNIVMHESTIFIGSLNASIVHPREVFKEAVKRSAAAIIVVHNHPSGDPEPSY 183 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D T+RL++ ++ I V DH+I+G S E G+L Sbjct: 184 EDIEATKRLIKCGEIFGIDVLDHIIIGDGYYVSIKEKGIL 223 >UniRef50_Q21TE2 UPF0758 protein Rfer_3252 n=12 Tax=cellular organisms RepID=Y3252_RHOFD Length = 234 Score = 168 bits (426), Expect = 6e-41, Method: Composition-based stats. Identities = 71/158 (44%), Positives = 97/158 (61%), Gaps = 1/158 (0%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 +K++ L G + + R + F + AV+ +L+LH+AA E F Sbjct: 78 LKRIKGL-GPAKRAELVAVLELSRRALAQQLKERTIFATPDAVKHYLQLHLAAKPHEVFA 136 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 VL+LD QN+L+A E LF GT+ +T V+PREVV RALH A++V+LAHNHPSG PS+AD Sbjct: 137 VLFLDVQNRLLALEELFRGTLTQTSVYPREVVLRALHHQASSVVLAHNHPSGTVQPSRAD 196 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 + LTQ L L L+D+RV DH+IV + S AE GLL Sbjct: 197 EMLTQTLKTTLALIDVRVLDHVIVAPGEALSMAERGLL 234 >UniRef50_B0T9R6 DNA repair protein RadC n=4 Tax=Alphaproteobacteria RepID=B0T9R6_CAUSK Length = 253 Score = 167 bits (424), Expect = 9e-41, Method: Composition-based stats. Identities = 70/158 (44%), Positives = 96/158 (60%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 + LS D +LI A R L +S A+ ++L+L MA ERE FR Sbjct: 96 LAALSTFVDTRVGIDLQLIYDAARRLAAAELPGRCVVSSWTALIDYLKLTMAHCEREAFR 155 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 VL+LD +NQLIA E L GT++ V+PREVV+RAL +A+AVIL HNHPSG+ TPS AD Sbjct: 156 VLFLDKKNQLIADEILNHGTVDHAPVYPREVVRRALEVSASAVILVHNHPSGDQTPSSAD 215 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +T+++V + + I V DH+IVG ++ SF GL+ Sbjct: 216 IEMTKKVVDAARTLGIAVHDHVIVGRAEVASFKALGLI 253 >UniRef50_Q0BRK0 DNA repair protein radC n=5 Tax=Alphaproteobacteria RepID=Q0BRK0_GRABC Length = 271 Score = 167 bits (423), Expect = 1e-40, Method: Composition-based stats. Identities = 57/134 (42%), Positives = 81/134 (60%) Query: 25 ALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRT 84 L R + + +L +A + E+FRVL+LDN+NQLIA E L GT+N Sbjct: 138 RLLRADAVAQPVLNNWERLIAYLNASLAREKNEQFRVLFLDNRNQLIADEILAHGTVNHA 197 Query: 85 EVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIV 144 V+PREVVKRAL +A A+I+ HNHPSG+ TPS D +T+ L + +L+ + + DH+I+ Sbjct: 198 PVYPREVVKRALELHATALIVVHNHPSGDPTPSAEDIRMTRELREAGRLLSLDLHDHVII 257 Query: 145 GGRQIYSFAEHGLL 158 G SF + GLL Sbjct: 258 GRHGWSSFRKQGLL 271 >UniRef50_C7GE95 DNA repair protein RadC n=2 Tax=Roseburia RepID=C7GE95_9FIRM Length = 243 Score = 166 bits (422), Expect = 1e-40, Method: Composition-based stats. Identities = 46/158 (29%), Positives = 82/158 (51%), Gaps = 1/158 (0%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 M+++ + G + + I + + + P V T+ + ++ H+ +E Sbjct: 85 MQKIRGI-GPIKAIQLKCIAELSKRIAQTKSAPNVCMTNPRTIADYYMEHLRHENKEHLI 143 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 V DN+ + + L G+ N T V PREV + A++ +AA +IL HNHPSG PS AD Sbjct: 144 VCMFDNKCHMKGDKLLSVGSANETIVSPREVFETAINCHAAHLILVHNHPSGIPEPSHAD 203 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +T+R++ QL+ I + DH+I+G +S+ E+ + Sbjct: 204 DVVTKRILNCGQLMGIPLSDHVIIGDHSYFSYRENNRI 241 >UniRef50_Q9KUK8 UPF0758 protein VC_0510 n=11 Tax=Gammaproteobacteria RepID=Y510_VIBCH Length = 157 Score = 166 bits (422), Expect = 2e-40, Method: Composition-based stats. Identities = 72/145 (49%), Positives = 94/145 (64%), Gaps = 2/145 (1%) Query: 14 QDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAH 73 Q+ +++ A L G A T+ A +E++R + + ERE F +L LDNQN+LI Sbjct: 15 QENEILEHAAEILANRYVR-GDALTNPDATKEYVRCKLGSYEREVFALLLLDNQNRLIEF 73 Query: 74 ETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQL 133 + LF GT++ V+PREVVK L NAAAVI AHNHPSG++TPSQAD+ +T+RL L L Sbjct: 74 KELFQGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGDSTPSQADRRITERLKDTLAL 133 Query: 134 VDIRVPDHLIVGGRQIYSFAEHGLL 158 VD+RV DH IV G SFAE G L Sbjct: 134 VDVRVLDH-IVTGDTCTSFAERGWL 157 >UniRef50_Q82ZX1 UPF0758 protein EF_2926 n=40 Tax=Firmicutes RepID=Y2926_ENTFA Length = 232 Score = 166 bits (421), Expect = 2e-40, Method: Composition-based stats. Identities = 48/161 (29%), Positives = 86/161 (53%), Gaps = 4/161 (2%) Query: 1 MKQLSFLPGE---MTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALERE 57 + +L + G + R I+ R + G TS+ V + L M L++E Sbjct: 70 LNELMAIKGIGQVKAIELRAAIELGCRIYQSSQIKFG-KVTSSQQVAQRLLQEMKGLQQE 128 Query: 58 EFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPS 117 +YL+ +N +I +T+F G++N++ HPRE+ + A+ +++A ++LAHNHPSG TPS Sbjct: 129 HLICIYLNTKNDIIQQKTIFKGSLNQSIAHPREIFREAVKYSSARILLAHNHPSGNPTPS 188 Query: 118 QADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D T+R+ + +++ I++ DH+I+G S E Sbjct: 189 PQDIQFTKRMEECGEMMGIQLLDHIILGDSGYISLREENFF 229 >UniRef50_B2UAP0 UPF0758 protein Rpic_2712 n=3 Tax=Burkholderiaceae RepID=Y2712_RALPJ Length = 224 Score = 166 bits (421), Expect = 2e-40, Method: Composition-based stats. Identities = 64/159 (40%), Positives = 92/159 (57%), Gaps = 2/159 (1%) Query: 2 KQLSFLPG--EMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEF 59 ++ S + G + R + G F S +V+++LRL + E F Sbjct: 66 QEFSSINGMGPAKYAQLHALLEVARRALKEDFTQGQTFESAQSVKDFLRLTLGHRPHEVF 125 Query: 60 RVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQA 119 +LD +++LIA E LF GT+ V+PRE+ KRALH NAAAVILAHNHP+G T PS++ Sbjct: 126 ACFFLDVRHRLIAWEELFRGTLTEARVYPREIAKRALHHNAAAVILAHNHPTGNTEPSES 185 Query: 120 DKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D LT+ L + L ++D+ V DH+IVG +Y F EHG + Sbjct: 186 DVILTRELCRALAMLDVIVLDHMIVGRNHVYGFLEHGKM 224 >UniRef50_C0Q9Z9 RadC3 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0Q9Z9_DESAH Length = 279 Score = 166 bits (421), Expect = 2e-40, Method: Composition-based stats. Identities = 56/160 (35%), Positives = 89/160 (55%), Gaps = 2/160 (1%) Query: 1 MKQLSFLPG--EMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREE 58 +++L + G +LI+ ++H + +L + RE Sbjct: 108 VEELCRVNGVGPSNVLGIKLIKAVSDRYLEQRIRSKTVLKNSHDLCAFLGHAIGHRPREV 167 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 F ++LD +N+++A E LF G+++ + V+PREV+ +AL AAA+I AHNHPSGET+PS Sbjct: 168 FVGIFLDAKNRVLASEILFEGSLSSSAVYPREVIAKALEHRAAALIFAHNHPSGETSPSP 227 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D +T+RL L I V +HLI GG + YSFA+ G++ Sbjct: 228 EDLAITRRLFFALAHAGITVHEHLITGGERFYSFADQGII 267 >UniRef50_Q0ACW7 DNA repair protein RadC n=2 Tax=Proteobacteria RepID=Q0ACW7_NITEC Length = 173 Score = 166 bits (420), Expect = 2e-40, Method: Composition-based stats. Identities = 66/155 (42%), Positives = 92/155 (59%) Query: 4 LSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLY 63 + L G T +I A RA + A T ++ + + E E F +++ Sbjct: 19 VKDLEGRYTVASDEMIFTATRAAIERKYPANTAMTKPEIAADYFKNKLNGFEHEVFSIIF 78 Query: 64 LDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTL 123 L++Q +LIA+ +F GT+ V+PREVVK A+ +NAAAVILAH HPS ET PSQADK + Sbjct: 79 LNSQYRLIAYREMFQGTLTCASVYPREVVKAAISYNAAAVILAHCHPSKETEPSQADKAI 138 Query: 124 TQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 T+RL + L L+D+ V DH+IVGG S AE GL+ Sbjct: 139 TKRLKEALDLIDVCVLDHIIVGGNTTKSMAEMGLV 173 >UniRef50_Q9KR57 UPF0758 protein VC_1786 n=59 Tax=Proteobacteria RepID=Y1786_VIBCH Length = 158 Score = 165 bits (419), Expect = 4e-40, Method: Composition-based stats. Identities = 72/147 (48%), Positives = 94/147 (63%), Gaps = 2/147 (1%) Query: 12 TPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLI 71 + R+++ A L++ G F T E+LR +A E E F VL+LDNQ++LI Sbjct: 14 RAYEHRVLEEAAEILEQRYVR-GETFARTENTTEYLRCKLAGYEHEIFAVLFLDNQHRLI 72 Query: 72 AHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVL 131 + LF GT++ V+PREV+K AL+ NAAAVI AHNHPSG+ PSQAD+ +TQRL L Sbjct: 73 EFKELFRGTVDAASVYPREVLKEALNVNAAAVIFAHNHPSGDPEPSQADRRITQRLKDAL 132 Query: 132 QLVDIRVPDHLIVGGRQIYSFAEHGLL 158 LVDIRV DH++VG SFAE G L Sbjct: 133 SLVDIRVLDHVVVGKSS-VSFAERGWL 158 >UniRef50_B4Y2Y7 RadC n=1 Tax=Aquabacterium sp. PL1F5 RepID=B4Y2Y7_9BURK Length = 198 Score = 165 bits (418), Expect = 4e-40, Method: Composition-based stats. Identities = 74/146 (50%), Positives = 91/146 (62%) Query: 13 PQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIA 72 + + L R G S V++WL ++ A LE E F VLYLD Q LI Sbjct: 53 AHKLSIARELLLRNMRSKMLEGPVMASPKVVKDWLSMYCAGLEHEVFLVLYLDAQQVLIE 112 Query: 73 HETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQ 132 E LF GT+ +T V+PREVVK AL NAAAV+LAHNHPSG+ +PS AD+ LTQ L L Sbjct: 113 AEELFRGTLTQTSVYPREVVKNALAHNAAAVLLAHNHPSGQLSPSGADELLTQTLKSSLM 172 Query: 133 LVDIRVPDHLIVGGRQIYSFAEHGLL 158 +VD+RV DH IVGG ++ SFAE GLL Sbjct: 173 MVDVRVLDHFIVGGDRVLSFAEQGLL 198 >UniRef50_Q2S042 UPF0758 protein SRU_2338 n=1 Tax=Salinibacter ruber DSM 13855 RepID=Y2338_SALRD Length = 233 Score = 165 bits (418), Expect = 4e-40, Method: Composition-based stats. Identities = 48/160 (30%), Positives = 81/160 (50%), Gaps = 3/160 (1%) Query: 2 KQLSFL--PGEMTPQDRRLIQRALRALDRHLHE-PGVAFTSTHAVREWLRLHMAALEREE 58 K+L+ G A R ++ + + T V + + L++E Sbjct: 73 KELTRTRGVGPAKATKLAAAFEAGRRVESQRQQDERMQVTCPADVADVYGPLLRDLDKEV 132 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 F+V++L+ N +I T+ G ++ + V PR V ++A+ +AAAVI HNHPSG PS+ Sbjct: 133 FKVVHLNTANVIIGDYTVSEGGLSSSVVEPRGVFEQAILDDAAAVICLHNHPSGNPEPSR 192 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D +T++L + + I V DHLI+ G + S AE G++ Sbjct: 193 EDIRITRQLAEAGGTMGIPVHDHLIIAGTKHTSLAERGVI 232 >UniRef50_C5D8D2 DNA repair protein RadC n=4 Tax=Firmicutes RepID=C5D8D2_GEOSW Length = 169 Score = 164 bits (417), Expect = 6e-40, Method: Composition-based stats. Identities = 55/160 (34%), Positives = 84/160 (52%), Gaps = 3/160 (1%) Query: 2 KQLSFLPGEM---TPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREE 58 +QL L E+ P R I + + S + L+ + +RE+ Sbjct: 10 QQLELLEREVPVKQPAKRVNIVSLKLVRESSVLYRERQIKSPEDAYKLLKPFLVEADREK 69 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 F V+ LD +NQ A G++N + VHPREV K A+ N+A++I+AHNHPS + TPS+ Sbjct: 70 FVVVCLDTKNQPTAINICHIGSLNSSIVHPREVFKSAILSNSASIIVAHNHPSSDPTPSR 129 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D +T+RLV+ ++V I + DHLIV + S E G + Sbjct: 130 EDIEVTKRLVEAGRIVGIELLDHLIVCEEKFVSLKEKGYI 169 >UniRef50_A0R7V6 DNA repair protein RadC n=5 Tax=Desulfuromonadales RepID=A0R7V6_PELPD Length = 168 Score = 164 bits (417), Expect = 6e-40, Method: Composition-based stats. Identities = 55/154 (35%), Positives = 87/154 (56%), Gaps = 8/154 (5%) Query: 12 TPQDRRLIQRALRALDRHLHEPGV-------AFTSTHAVREWLRLHMAALEREEFRVLYL 64 TP +R++ +++ A R FTS V E + + +E F L+L Sbjct: 16 TPATKRIVLKSIEARYRKEAVREDAPEWVTTRFTSPKQVFELFKDLI-YETKEHFITLHL 74 Query: 65 DNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLT 124 D +N+++ + + G++N++ VHPREV K AL NAAA+I H HPSG+ PS D ++T Sbjct: 75 DGKNRIMCMDRVSIGSLNQSIVHPREVFKTALLSNAAAIICVHQHPSGDPNPSSEDLSIT 134 Query: 125 QRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +RL + +++ IRV DH++VG SF E GL+ Sbjct: 135 KRLKEAGEIMGIRVLDHIVVGHEDYISFVEKGLM 168 >UniRef50_A4SUN7 DNA repair protein n=2 Tax=Aeromonas salmonicida subsp. salmonicida A449 RepID=A4SUN7_AERS4 Length = 296 Score = 164 bits (417), Expect = 7e-40, Method: Composition-based stats. Identities = 68/147 (46%), Positives = 89/147 (60%), Gaps = 1/147 (0%) Query: 11 MTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQL 70 T +++R+I A + R + S V E+L+ A LE E F ++ LDNQ+++ Sbjct: 17 FTEREKRIIALAHSIIARRFTR-LDSLNSPEMVVEYLKTRFATLEHETFAMILLDNQHRV 75 Query: 71 IAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQV 130 I L GTI+ V+PREVVK AL NAAAVILAHNHPSG PS+AD+ +T+RL Sbjct: 76 INAVDLSHGTIDSAAVYPREVVKTALKHNAAAVILAHNHPSGVAEPSRADRQITERLQAA 135 Query: 131 LQLVDIRVPDHLIVGGRQIYSFAEHGL 157 L LVDIRV DH++V G SFA G Sbjct: 136 LDLVDIRVLDHIVVAGENSMSFAVRGF 162 >UniRef50_B9ECC3 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9ECC3_MACCJ Length = 150 Score = 164 bits (416), Expect = 7e-40, Method: Composition-based stats. Identities = 45/136 (33%), Positives = 77/136 (56%) Query: 23 LRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTIN 82 ++ R + + S V ++ + + RE+F ++ L+ +N++ T+F GTIN Sbjct: 15 VKQYYRKTRDERIKVKSPDNVADFCKKLIGNSVREKFLLVGLNTKNEITFVYTVFIGTIN 74 Query: 83 RTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHL 142 + +HPREV + A+ + A++ILAH HPS + TPS D+ T+R + +L+ I V DH+ Sbjct: 75 MSPIHPREVFQVAILNSCASIILAHCHPSDDPTPSSEDREATKRFEECGELLGIPVLDHI 134 Query: 143 IVGGRQIYSFAEHGLL 158 IV +SF E+ L Sbjct: 135 IVTESSYFSFRENNLF 150 >UniRef50_A1TJG0 DNA repair protein RadC n=1 Tax=Acidovorax citrulli AAC00-1 RepID=A1TJG0_ACIAC Length = 167 Score = 164 bits (415), Expect = 9e-40, Method: Composition-based stats. Identities = 71/149 (47%), Positives = 99/149 (66%) Query: 10 EMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQ 69 +T Q+ RL+ RAL L++ + A ++ + ++LRL +A E F V++LD QN+ Sbjct: 19 ALTVQESRLVHRALHVLEQRMFHREAAISTPRELYDYLRLKLAGELHEVFGVVFLDCQNR 78 Query: 70 LIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQ 129 IA E LF GTIN+ V+PR +VKRA+ NA++VIL HNHPSG + S AD+ LT+R+ Sbjct: 79 AIAFEALFRGTINQAVVYPRVIVKRAMDLNASSVILVHNHPSGTSQCSDADRGLTERICA 138 Query: 130 VLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 L L+D+RV DH+IVG YSFAE GLL Sbjct: 139 SLGLIDVRVVDHVIVGSGTPYSFAEAGLL 167 >UniRef50_B7ANR2 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7ANR2_9BACE Length = 246 Score = 164 bits (415), Expect = 1e-39, Method: Composition-based stats. Identities = 41/150 (27%), Positives = 75/150 (50%) Query: 9 GEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQN 68 G + + R + + + F + ++ ++ + E E ++ LD + Sbjct: 93 GSVKALQIMAVIELSRRISKSCAYRRLDFRNPVSIADYYMEDLRHAECERLVLVMLDTKL 152 Query: 69 QLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLV 128 +LI E + TGT+N + V PRE+ AL A +++ HNHPSG+ PS D +T+R+ Sbjct: 153 RLIKDEIISTGTVNASIVSPREIFVAALRAGAVFIVMLHNHPSGDAEPSSNDIAITRRVQ 212 Query: 129 QVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +++ I + DH+I+G + S E GL+ Sbjct: 213 LAGEMLGISLIDHIIIGDNRFVSLKESGLM 242 >UniRef50_D2BJ47 DNA repair protein n=5 Tax=Dehalococcoides RepID=D2BJ47_DEHSV Length = 275 Score = 164 bits (415), Expect = 1e-39, Method: Composition-based stats. Identities = 56/158 (35%), Positives = 89/158 (56%), Gaps = 2/158 (1%) Query: 3 QLSFLPG--EMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 +L + G E+ LI+ R + + V ++L M L++E F+ Sbjct: 85 ELLSIKGIGEVNSMALTLIREVSRRYLKDGIMEKPVCNTAQQVFDYLYCAMRGLKKEVFK 144 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 V+YLD+Q++++ LFTGT+ + PREV+ A+ NA+A+I HNHPSG+ PSQAD Sbjct: 145 VIYLDSQHRVLELADLFTGTVASGSIVPREVIAAAISQNASALIFVHNHPSGKIEPSQAD 204 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 K +T+ LV ++ IR DH+I+G +SFA G++ Sbjct: 205 KDVTRELVYAAMVMKIRALDHIIIGDNCYFSFAAAGIM 242 >UniRef50_A5IM26 UPF0758 protein Tpet_1235 n=7 Tax=Thermotogaceae RepID=Y1235_THEP1 Length = 222 Score = 163 bits (414), Expect = 1e-39, Method: Composition-based stats. Identities = 53/160 (33%), Positives = 89/160 (55%), Gaps = 3/160 (1%) Query: 1 MKQLSFLPGE--MTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREE 58 +++++ + G + + + L R L S+ V + + M LERE Sbjct: 64 LEEIASVEGVGMVKAITLKAALELGKRLHRELERIPEKLDSSVKVYRYCQ-EMVYLEREI 122 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 +V+ LD + +I TL GT +R+ +HPR+V + A+ NA+ VI+ HNHPSG+ TPS+ Sbjct: 123 VKVICLDTKLNVIGENTLTVGTSDRSLIHPRDVFRTAIRANASGVIVVHNHPSGDPTPSK 182 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D+ +T+RL Q +++ + + DH+IV R +SF E G L Sbjct: 183 EDRLITERLKQAGEILGVSLVDHVIVSRRGYFSFREEGEL 222 >UniRef50_C4XRP2 DNA repair protein RadC n=4 Tax=Desulfovibrionales RepID=C4XRP2_DESMR Length = 228 Score = 163 bits (414), Expect = 1e-39, Method: Composition-based stats. Identities = 51/159 (32%), Positives = 80/159 (50%), Gaps = 2/159 (1%) Query: 2 KQLSFLPGEMTPQD--RRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEF 59 ++L +PG + L + S V E R + E EEF Sbjct: 70 EELRGVPGFGAGAEEFLTLWREVWARFHEQPMRDRAVLGSPDVVAEMARARIGVKEHEEF 129 Query: 60 RVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQA 119 + +D +N+L+ E + GT+++ V+PREV+ AL +NA+ VIL HNHP + PS Sbjct: 130 WMALVDTKNRLVGWERVSKGTVDQAAVYPREVIAMALRYNASGVILVHNHPGADPKPSAE 189 Query: 120 DKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D T+R+V + +DIRV DHL+V + +SF G++ Sbjct: 190 DMAFTRRIVAAAREMDIRVLDHLVVTENRFFSFQAEGMI 228 >UniRef50_UPI0001BC32AB DNA repair protein RadC n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC32AB Length = 227 Score = 163 bits (414), Expect = 1e-39, Method: Composition-based stats. Identities = 45/150 (30%), Positives = 76/150 (50%) Query: 9 GEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQN 68 G++ + I + + F ++ ++ + LE E F VL L+ + Sbjct: 78 GKVKSIMFQCIGELSSRISKATMAKRTVFNTSKDAADYCMEELRHLEYECFMVLLLNTKC 137 Query: 69 QLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLV 128 +LI + L GT+N T + REV + AL A +I+ HNHPSG+ TPS+ D T++L Sbjct: 138 ELINEKILSMGTVNYTCITSREVYRYALSKGAVYIIVVHNHPSGDPTPSREDSLCTKKLK 197 Query: 129 QVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 + +LV I + DH+I+G + S E ++ Sbjct: 198 EAGELVGIPLIDHIIIGDNRYISLKEQDMI 227 >UniRef50_C6XNR3 DNA repair protein RadC n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XNR3_HIRBI Length = 272 Score = 163 bits (414), Expect = 1e-39, Method: Composition-based stats. Identities = 56/158 (35%), Positives = 90/158 (56%), Gaps = 1/158 (0%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 +K++ + GE + + + ++ A+ +R+ + E+FR Sbjct: 116 LKEVDGI-GETCATYIQATHLLNQRCSLEEVKARPIISNWGALLSHVRIALQHETEEQFR 174 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 VL+LD++NQLIA E GTIN V+PRE+ KRAL +A+A+IL HNHPSG+ TPS+AD Sbjct: 175 VLFLDHKNQLIADERQSQGTINHAPVYPRELAKRALELSASALILVHNHPSGDPTPSRAD 234 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +T+ ++ + ++I + DHLIVG + I S L+ Sbjct: 235 IDVTREIMDAFEPLEITIHDHLIVGKKGITSLKAKNLI 272 >UniRef50_C6BYC2 DNA repair protein RadC n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BYC2_DESAD Length = 225 Score = 163 bits (413), Expect = 2e-39, Method: Composition-based stats. Identities = 53/159 (33%), Positives = 82/159 (51%), Gaps = 2/159 (1%) Query: 2 KQLSFLPG--EMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEF 59 +QL G L++ + A +S V + + L +EEF Sbjct: 67 EQLKKFKGIGPGVLIFFTLMREFWTRIAEEPMNGKEAISSPDVVYKAAMARIGNLSKEEF 126 Query: 60 RVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQA 119 + ++N+N++I E L GT+++T V+PREVV AL NA+ VIL HNHP G+ +PS Sbjct: 127 WIALVNNRNKVICWERLSEGTVDKTAVYPREVVALALRHNASGVILTHNHPGGDPSPSPE 186 Query: 120 DKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D T + + Q ++IR+ DH+IV + +SF E G L Sbjct: 187 DTERTMEIAALCQDMEIRLLDHVIVTADRFHSFKEAGYL 225 >UniRef50_D1U9S4 DNA repair protein RadC n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U9S4_9DELT Length = 227 Score = 163 bits (413), Expect = 2e-39, Method: Composition-based stats. Identities = 55/158 (34%), Positives = 83/158 (52%), Gaps = 1/158 (0%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 ++ +S + G L Q + G + V + + EEF Sbjct: 71 LEAISGI-GPAAVAHWALTQELFARMGEARTRSGAPLSDPAEVARAAMARIGSKGVEEFW 129 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 ++D++N++IA E + GT++ T V PRE++ AL AAA+ILAHNHP G+ TPS+ D Sbjct: 130 AAFMDSKNRVIAWEQVSKGTVDATPVFPREIMVTALRLEAAALILAHNHPGGDPTPSRED 189 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 LT+R+ Q + IR+ DH+IV + YSF EHG L Sbjct: 190 LDLTRRIRDTAQGLGIRILDHIIVTDHEYYSFNEHGRL 227 >UniRef50_A9IU27 UPF0758 protein Bpet3149 n=5 Tax=Bordetella RepID=Y3149_BORPD Length = 225 Score = 163 bits (413), Expect = 2e-39, Method: Composition-based stats. Identities = 65/159 (40%), Positives = 86/159 (54%), Gaps = 2/159 (1%) Query: 2 KQLSFLPGEMTPQD--RRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEF 59 ++L LPG + I R A + +V+ + + +A E Sbjct: 67 QELMSLPGLGAAKAGTLAAILELARRAAEERLMRQQAMSEPGSVKRYFKTALANCAVEHC 126 Query: 60 RVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQA 119 LYLD+Q LI L GT+ R V+PREVV+ AL +AAA+ILAHNHPSG PSQA Sbjct: 127 LALYLDSQLNLITSGELARGTLARASVYPREVVREALRHHAAALILAHNHPSGSAQPSQA 186 Query: 120 DKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D+ T+ + Q L LV+IR+ DHLIV G + S AE GLL Sbjct: 187 DRDFTRHMQQALALVEIRLLDHLIVAGDTVVSMAELGLL 225 >UniRef50_B2A699 DNA repair protein RadC n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A699_NATTJ Length = 241 Score = 163 bits (412), Expect = 3e-39, Method: Composition-based stats. Identities = 53/161 (32%), Positives = 84/161 (52%), Gaps = 5/161 (3%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPG---VAFTSTHAVREWLRLHMAALERE 57 + +L +PG + + ++ A +R + TS + + + RE Sbjct: 82 ISELCEIPGIGYAKSIK-LKAAFELANRCMAREQLTMDKITSPEDIFRLMNFRLKTETRE 140 Query: 58 EFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPS 117 F + L+ ++ L+ + + G++N T VHPREV RA+ +A VIL HNHPSG+ PS Sbjct: 141 HFLAVMLNTKSYLLKIDLISIGSLNATIVHPREVFNRAIRASACGVILVHNHPSGDPEPS 200 Query: 118 QADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSF-AEHGL 157 Q D LT RLV L+ I + DH+I+G ++ YSF E+ L Sbjct: 201 QDDIKLTNRLVAAGDLLGIPIMDHVIIGHQKFYSFSRENHL 241 >UniRef50_Q47ZW8 DNA repair protein, RadC family protein n=20 Tax=Gammaproteobacteria RepID=Q47ZW8_COLP3 Length = 158 Score = 163 bits (412), Expect = 3e-39, Method: Composition-based stats. Identities = 70/145 (48%), Positives = 95/145 (65%), Gaps = 2/145 (1%) Query: 14 QDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAH 73 + +++ A L + AFTS+ A +++LR +A E E F V+ LDNQ+Q+I Sbjct: 16 TENQILDAAAEILA-CKYVRKDAFTSSQATKDFLRFKLANKEHEIFAVMLLDNQHQMIDF 74 Query: 74 ETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQL 133 LF GTI+ + V+PREVVK L NAAAVIL HNHPSG +PS ADK +T+RL + L L Sbjct: 75 VELFRGTIDASAVYPREVVKTVLLENAAAVILTHNHPSGLNSPSIADKDITKRLQEALAL 134 Query: 134 VDIRVPDHLIVGGRQIYSFAEHGLL 158 +D+RV DH+I+G SFAE+GLL Sbjct: 135 IDVRVLDHIIIGEGTY-SFAENGLL 158 >UniRef50_Q2SAN5 DNA repair protein n=2 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SAN5_HAHCH Length = 183 Score = 163 bits (412), Expect = 3e-39, Method: Composition-based stats. Identities = 65/141 (46%), Positives = 89/141 (63%) Query: 18 LIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLF 77 +++ A RAL + V+E+L +H+A RE F L+LD QN+LIA+E LF Sbjct: 31 VLKAAKRALAQRFKRHSCHMDDPGKVKEYLMMHLAPEPRETFVGLFLDTQNRLIAYEVLF 90 Query: 78 TGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIR 137 G I+ ++PREVVK AL NAA VI+AHNHPSG+ PS D+ +T RL+Q L LV+I Sbjct: 91 RGAIDEAHIYPREVVKAALRHNAAKVIVAHNHPSGDPKPSVNDQLITYRLLQALMLVEIP 150 Query: 138 VPDHLIVGGRQIYSFAEHGLL 158 + DH +VGG Q+ S A G+ Sbjct: 151 LIDHFVVGGDQVVSMAAQGIF 171 >UniRef50_C0R2T1 DNA repair protein RadC n=7 Tax=Wolbachia RepID=C0R2T1_WOLWR Length = 224 Score = 162 bits (411), Expect = 3e-39, Method: Composition-based stats. Identities = 46/160 (28%), Positives = 93/160 (58%), Gaps = 2/160 (1%) Query: 1 MKQLSFLPGEMTPQDRRL--IQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREE 58 ++ L + G + +++A R + + + ++LR+ + +L +E Sbjct: 65 LEALQNVDGVSNAAISAIFCVKQAFVRSAREEIKDLPIIDNWEKLLDYLRISIGSLNKEN 124 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 FRV+Y++ + +LIA + GT+++T ++ RE++KRAL + +++++HNHPS +T PS Sbjct: 125 FRVIYMNKKYRLIAEDLQNIGTVDQTPLYVREIIKRALLIGSTSIVISHNHPSRDTQPSN 184 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +D +LT++L + Q + I + DH+I+ +SF E+ LL Sbjct: 185 SDISLTRQLAEACQSIGIELIDHIIITFSSYFSFKENRLL 224 >UniRef50_Q64AS5 DNA repair proteins n=1 Tax=uncultured archaeon GZfos29E12 RepID=Q64AS5_9ARCH Length = 403 Score = 162 bits (411), Expect = 3e-39, Method: Composition-based stats. Identities = 46/153 (30%), Positives = 78/153 (50%), Gaps = 5/153 (3%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRH----LHEPGVAFTSTHAVREWLRLHMAALER 56 + +L + G + I RH + V V + + ++ Sbjct: 244 LNELQEIKG-IGFAKACQIIALFEFNKRHNKAVKTKEIVTIEKPEDVYNYFVDELKDKKK 302 Query: 57 EEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTP 116 E F L LD++N+LI + + GT++ + VHPREV K A+ +AA VIL HNHPSG+ P Sbjct: 303 EHFYALLLDSKNKLIKKDLVSVGTLDNSLVHPREVFKEAIKNSAAGVILVHNHPSGDPEP 362 Query: 117 SQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQI 149 S+ D +TQ++ + +++I+V DH+I+ + Sbjct: 363 SENDVEITQKIAKAGNILNIKVLDHVIIAEKGW 395 >UniRef50_Q5E054 DNA repair protein RadC n=3 Tax=Gammaproteobacteria RepID=Q5E054_VIBF1 Length = 157 Score = 162 bits (411), Expect = 3e-39, Method: Composition-based stats. Identities = 71/145 (48%), Positives = 95/145 (65%), Gaps = 2/145 (1%) Query: 14 QDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAH 73 Q+ +++ A L G AF++ A + +LR + ERE F VL LDNQ++LI Sbjct: 15 QENEILEHAAEILANRYVR-GDAFSNPTATQNYLRYKLGHYEREVFAVLLLDNQHRLIEF 73 Query: 74 ETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQL 133 + LF GT++ V+PREVVK L NAAAVI AHNHPSGE+TPSQADK +T RL + L L Sbjct: 74 KELFQGTVDAASVYPREVVKAVLEVNAAAVIFAHNHPSGESTPSQADKRITTRLKEALAL 133 Query: 134 VDIRVPDHLIVGGRQIYSFAEHGLL 158 +D++V DH++VG SFAE GL+ Sbjct: 134 IDVQVLDHIVVG-ETCVSFAERGLI 157 >UniRef50_Q3BQ28 RadC family DNA repair protein n=5 Tax=Xanthomonas RepID=Q3BQ28_XANC5 Length = 187 Score = 162 bits (411), Expect = 3e-39, Method: Composition-based stats. Identities = 67/140 (47%), Positives = 88/140 (62%), Gaps = 1/140 (0%) Query: 18 LIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLF 77 ++ A L++ L G S ++L A L E F V++LD ++Q++A E LF Sbjct: 48 ILLAAATILEQRLQRQG-KIHSPDQAGDYLISRCAHLPHEVFGVVFLDIKHQILATEHLF 106 Query: 78 TGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIR 137 GTI+ EVHPR V KRAL NAAAVIL HNHPSG PS+AD+ +T+RL + L L+DIR Sbjct: 107 FGTIDGCEVHPRVVAKRALDLNAAAVILFHNHPSGNPEPSEADRKVTERLQKALSLLDIR 166 Query: 138 VPDHLIVGGRQIYSFAEHGL 157 V DHL++GGRQ S A G Sbjct: 167 VLDHLVIGGRQHISLAARGW 186 >UniRef50_Q7VMM9 Conserved possible DNA repair protein n=1 Tax=Haemophilus ducreyi RepID=Q7VMM9_HAEDU Length = 157 Score = 162 bits (411), Expect = 3e-39, Method: Composition-based stats. Identities = 68/156 (43%), Positives = 93/156 (59%) Query: 3 QLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVL 62 QLS +M Q + L + LR + +F E+ ++ + ERE F VL Sbjct: 2 QLSTQHQDMLNQAKALYENVLRETGIRSYASNPSFGDEKEASEYCQMQLGFEEREVFGVL 61 Query: 63 YLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKT 122 + D QN+LI E LF GTIN+ +HPRE+VK+AL N++AVIL HNHPSG+ TPSQ+DK Sbjct: 62 FWDTQNRLIRFEKLFFGTINQASIHPREIVKKALELNSSAVILTHNHPSGQVTPSQSDKQ 121 Query: 123 LTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 T ++ Q QL+D+ V DH+IV YSF H L+ Sbjct: 122 TTAKIKQACQLIDVNVLDHIIVSATDTYSFCMHQLM 157 >UniRef50_A5FRP1 DNA repair protein RadC n=6 Tax=cellular organisms RepID=A5FRP1_DEHSB Length = 228 Score = 162 bits (410), Expect = 4e-39, Method: Composition-based stats. Identities = 55/161 (34%), Positives = 84/161 (52%), Gaps = 4/161 (2%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRH---LHEPGVAFTSTHAVREWLRLHMAALERE 57 +++LS L G + ++ A R E + V + + + ++E Sbjct: 69 VEELSKLKG-IGLAKACQLKAAFELAKRAGGIKGEYQPCIKTPEDVFQIIYPLVCDEKKE 127 Query: 58 EFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPS 117 F L LD +++LI + G++ + VHPREV K AL +AA+VILAHNHPSG+T PS Sbjct: 128 YFFCLMLDVKSRLIRVGHISVGSLEESVVHPREVFKEALSASAASVILAHNHPSGDTEPS 187 Query: 118 QADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D L+ RL + ++ I V DH+I+GG+ S GLL Sbjct: 188 HDDIGLSARLREAGGIMGIEVLDHIIIGGQSFTSLKRQGLL 228 >UniRef50_B8KQ45 DNA repair protein RadC n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KQ45_9GAMM Length = 177 Score = 162 bits (410), Expect = 4e-39, Method: Composition-based stats. Identities = 67/152 (44%), Positives = 92/152 (60%), Gaps = 1/152 (0%) Query: 7 LPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDN 66 P TP +R+I++AL L+ L A TS VR++ +L + E F L+L Sbjct: 27 QPDAWTPAQQRIIEKALALLESRLINS-DALTSPVRVRQYCQLQLGHERDEHFACLFLTA 85 Query: 67 QNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQR 126 Q+ I+ E F G+I+ V+PR +V+R L NAAAVIL HNHPSG + PS AD+ +T R Sbjct: 86 QHHAISFEIQFRGSIDGAAVYPRVIVRRCLELNAAAVILVHNHPSGVSEPSPADRQITVR 145 Query: 127 LVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 L + L+L+D+RV DHLIV SFA+ GLL Sbjct: 146 LQRALELIDVRVVDHLIVSAGDATSFAQAGLL 177 >UniRef50_B2V090 UPF0758 protein CLH_0547 n=18 Tax=Clostridium RepID=Y547_CLOBA Length = 229 Score = 162 bits (410), Expect = 4e-39, Method: Composition-based stats. Identities = 42/158 (26%), Positives = 85/158 (53%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 + + + Q L + R + + S + + + M+ L++E + Sbjct: 72 ITSIKGIKEGKASQILALAELFRRFRTFKSADRDIKIMSPNDIAMLINGEMSLLKQEILK 131 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 V++L+ +N +I + +F G++N + VHPRE+ K A++ ++ +I+ HNHPSG+ TPS+ D Sbjct: 132 VIFLNTKNIVIGTKDVFKGSLNTSIVHPREIFKEAVNKSSTKIIICHNHPSGDPTPSKED 191 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +T R+ + +++ I++ DH+I+G S E G + Sbjct: 192 INITLRIKECGEIMGIQLLDHIIIGKNGFISLKEKGFI 229 >UniRef50_Q3AF80 UPF0758 protein CHY_0341 n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Y341_CARHZ Length = 226 Score = 161 bits (409), Expect = 5e-39, Method: Composition-based stats. Identities = 47/159 (29%), Positives = 79/159 (49%), Gaps = 2/159 (1%) Query: 2 KQLSFLPGEMTPQDRRLIQRAL--RALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEF 59 +QL G + +L+ R E + F + V +LR + ++E+ Sbjct: 68 EQLKSFKGIGQAKAAKLLAALELARRYYELTGENKLNFLNPDDVYNYLRYKIGHKKQEQV 127 Query: 60 RVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQA 119 VLYL+ +NQL + G +N V P ++ + A+ A AVI+AHNHPSG+ TPS+ Sbjct: 128 VVLYLNTKNQLCGENIVAIGGVNHAGVSPGDIFREAVKIGAYAVIIAHNHPSGDPTPSKE 187 Query: 120 DKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D T R+ + +++ I++ DH+I+G + S L Sbjct: 188 DIDFTGRVKKASEILGIKLLDHIILGENKYISMKAERLF 226 >UniRef50_C6J5M2 DNA repair protein RadC n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J5M2_9BACL Length = 162 Score = 161 bits (409), Expect = 6e-39, Method: Composition-based stats. Identities = 52/157 (33%), Positives = 88/157 (56%), Gaps = 3/157 (1%) Query: 2 KQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRV 61 QL+ LP Q +L++ + ++ E + V + + + L++E F + Sbjct: 9 SQLNALPPRRRKQAEKLLELIRKVME---GEKDHYIHTPADVFQAVATDLVGLDKEHFMI 65 Query: 62 LYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADK 121 L L+ +N++++ E + GT+N VHPREV K A+ AA++I HNHPSG+ PS DK Sbjct: 66 LILNTKNRILSKEVISIGTLNSAIVHPREVFKPAIIKGAASIICVHNHPSGDPAPSSEDK 125 Query: 122 TLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 LT+RL+Q +++ I V DH+++G S E G++ Sbjct: 126 KLTERLIQAGEIIGIDVLDHVVIGTEGYVSLKEQGMI 162 >UniRef50_D2NHT0 Putative phage DNA repair protein n=1 Tax=Escherichia coli SE15 RepID=D2NHT0_ECOLX Length = 156 Score = 161 bits (408), Expect = 7e-39, Method: Composition-based stats. Identities = 70/148 (47%), Positives = 99/148 (66%), Gaps = 1/148 (0%) Query: 11 MTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQL 70 T ++ R++ +A + R+ ++ GV S VR + + +A LE EEF ++ LDNQNQL Sbjct: 10 FTQRETRILDQARDIISRY-YQRGVQLCSPDDVRRCVMVELAPLEHEEFGIILLDNQNQL 68 Query: 71 IAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQV 130 + E LF GT+N VHPREV+KR L NAAAVIL HNHPSGE PS+ D LT++L ++ Sbjct: 69 LHREILFRGTLNSVSVHPREVIKRVLKHNAAAVILVHNHPSGEPEPSRCDIQLTKKLQEL 128 Query: 131 LQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 L+++D+R+ DH IV G + S AE GL+ Sbjct: 129 LEILDVRLLDHFIVAGTETVSMAERGLV 156 >UniRef50_B7C9V0 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9V0_9FIRM Length = 224 Score = 161 bits (407), Expect = 8e-39, Method: Composition-based stats. Identities = 57/160 (35%), Positives = 84/160 (52%), Gaps = 3/160 (1%) Query: 1 MKQLSFLPG--EMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREE 58 + L + G E+ + + + V EW + + +E Sbjct: 65 VNTLMQIQGIREVKALQLLASVELSKRVIKSKVYHAPILK-PEDVIEWFKFEYGTMSQEC 123 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 F LYLD +++LI+H LF GT+N + VHPREV K A NA +V++AHNHPSG+ TPS+ Sbjct: 124 FIALYLDTKSKLISHRVLFKGTLNESVVHPREVFKEAFLQNANSVLIAHNHPSGDCTPSK 183 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 AD +T ++V V + + + DH+IV Q YSF EH L Sbjct: 184 ADFEVTYKMVHVAMTMGVCLVDHIIVCKNQYYSFKEHKYL 223 >UniRef50_A5URD0 UPF0758 protein RoseRS_0767 n=7 Tax=Bacteria RepID=Y767_ROSS1 Length = 233 Score = 160 bits (406), Expect = 1e-38, Method: Composition-based stats. Identities = 43/149 (28%), Positives = 82/149 (55%) Query: 9 GEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQN 68 GE + R L + S + +++ M+ L++E+ R + LD +N Sbjct: 80 GEAKTAQLKAALEIGRRLLLAGGDERFLIRSPTDAAQLMQIEMSHLDQEQLRAICLDTKN 139 Query: 69 QLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLV 128 ++ +T++ G+++ + V E+ K + N+A++I+ HNHPSG+ TPS D +T++++ Sbjct: 140 RVQKIQTVYIGSLHTSMVRIGEIFKEPIRLNSASIIVVHNHPSGDPTPSPEDVVVTRQII 199 Query: 129 QVLQLVDIRVPDHLIVGGRQIYSFAEHGL 157 + +L+DI V DHL++G + S E GL Sbjct: 200 EAGRLLDIDVLDHLVIGAGRFVSMRERGL 228 >UniRef50_B4X5D3 DNA repair protein RadC n=4 Tax=Alcanivorax sp. DG881 RepID=B4X5D3_9GAMM Length = 164 Score = 160 bits (406), Expect = 1e-38, Method: Composition-based stats. Identities = 57/125 (45%), Positives = 84/125 (67%) Query: 34 GVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVK 93 A T+ V ++L++ +A + E F ++L+N++++++ E LF+GTI+ V+PR VV+ Sbjct: 40 REALTAPTDVAQFLQMALAQEKNEVFAAIFLNNKHKVLSFEPLFSGTIDGAAVYPRVVVQ 99 Query: 94 RALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFA 153 +AL NAAAVI AHNHPSG PSQAD+T+T RL L L+D+RV DH +V + S A Sbjct: 100 QALACNAAAVIFAHNHPSGCCEPSQADRTITTRLKDALALIDVRVLDHFVVSRSEWVSLA 159 Query: 154 EHGLL 158 E G L Sbjct: 160 ERGWL 164 >UniRef50_B1C9I2 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C9I2_9FIRM Length = 224 Score = 160 bits (406), Expect = 1e-38, Method: Composition-based stats. Identities = 57/159 (35%), Positives = 88/159 (55%), Gaps = 2/159 (1%) Query: 2 KQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVA--FTSTHAVREWLRLHMAALEREEF 59 ++L MT +I +L R + T + + L M+ L+ E F Sbjct: 66 EELKNDNPGMTDLKCDMILASLEIGRRAYLKKEKQKIITCVMDIVDLLSYDMSFLDEEHF 125 Query: 60 RVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQA 119 +V+ L+ +N +I E + GTIN + VH REV + A+ NA ++ILAHNHPSG++TPS Sbjct: 126 KVILLNTKNMVIETELISIGTINTSLVHVREVFRNAIKKNANSIILAHNHPSGDSTPSIE 185 Query: 120 DKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D+ LT+RL +L+ I+V DH+I+G +SF E +L Sbjct: 186 DEHLTKRLKDAGELIGIKVIDHVIIGKDNYFSFMEENML 224 >UniRef50_A9KL05 DNA repair protein RadC n=7 Tax=Clostridiales RepID=A9KL05_CLOPH Length = 232 Score = 160 bits (406), Expect = 1e-38, Method: Composition-based stats. Identities = 44/150 (29%), Positives = 82/150 (54%) Query: 9 GEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQN 68 G + + + + G+ +T +V E+ M +L+ E+ R+L D ++ Sbjct: 82 GRVKAIQLLCLTELSIRMAKATFADGIRYTDPSSVAEYYMQDMRSLKTEQSRLLMFDTKS 141 Query: 69 QLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLV 128 +L+ E + GT+N + + PREV A+ + A +IL HNHPSG+ TPS+ D +T+R+ Sbjct: 142 KLLREEIISIGTVNASIMSPREVFLLAVKYEAVYIILLHNHPSGDPTPSKEDIAVTKRMK 201 Query: 129 QVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 + +L+ + + DH+I+G + S E G++ Sbjct: 202 EAGELLGVTLMDHIIIGDNRYISLKEQGII 231 >UniRef50_A1BHA1 UPF0758 protein Cpha266_1761 n=11 Tax=Chlorobiaceae RepID=Y1761_CHLPD Length = 223 Score = 160 bits (405), Expect = 1e-38, Method: Composition-based stats. Identities = 53/160 (33%), Positives = 85/160 (53%), Gaps = 3/160 (1%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEP--GVAFTSTHAVREWLRLHMAALEREE 58 + +L + G + ++I R + S V E++ + + +E Sbjct: 64 LSELQEIKGIGQAKAMQII-AVFELNKRIHYSRNLQRKVLSARDVFEYMAGRVPDITKEH 122 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 VL+L+ +NQ+I +E + GT+N + HPREV K A+ +A A+IL HNHPSG+ PS Sbjct: 123 LFVLHLNTKNQIIRNEQVTVGTLNASLAHPREVFKSAIRESAHAIILVHNHPSGDVEPSN 182 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 AD+ +T+ L Q + I + DH+I+G +SF EH LL Sbjct: 183 ADRQVTEILRQAGSFLQIDLLDHVIIGVDTWFSFREHSLL 222 >UniRef50_A7HJG0 DNA repair protein RadC n=3 Tax=Thermotogaceae RepID=A7HJG0_FERNB Length = 225 Score = 160 bits (405), Expect = 1e-38, Method: Composition-based stats. Identities = 45/154 (29%), Positives = 81/154 (52%), Gaps = 2/154 (1%) Query: 2 KQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRV 61 K + L ++ A R + TS V ++ M + +E RV Sbjct: 65 KSIKGLGDVKIVTLMAALELAKRLVKEETVILDPKLTSPENVFQYCID-MQSYPQEIVRV 123 Query: 62 LYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADK 121 ++LD + ++I + + GTIN + HPR++ + A+ ++ +ILAHNHPSG+ TPS+ D Sbjct: 124 IFLDTKLKVIGSKDVSKGTINSSMAHPRDIFREAILRSSTGIILAHNHPSGDPTPSKDDI 183 Query: 122 TLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEH 155 LT+++ + +L+ I + DH+I+G + YS + Sbjct: 184 ELTKKIKKAGELLGINLHDHVIIG-QTFYSLRQK 216 >UniRef50_D2RM81 DNA repair protein RadC n=2 Tax=Acidaminococcus RepID=D2RM81_ACIFE Length = 220 Score = 160 bits (405), Expect = 1e-38, Method: Composition-based stats. Identities = 53/161 (32%), Positives = 84/161 (52%), Gaps = 4/161 (2%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHL---HEPGVAFTSTHAVREWLRLHMAALERE 57 +++L+ + G + P +I AL R P + + E Sbjct: 61 VRELTRISG-IGPAKATVILAALELGRRLAGAGTRPFRTIHCPEDGAMLVMPRLRYENHE 119 Query: 58 EFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPS 117 F V+ L+++ ++I E + G++N + VHPRE AL +AAA++ HNHPSG+ TPS Sbjct: 120 HFLVVLLNSKGKVIGIEPVSEGSLNASVVHPREAFAPALLHHAAAILAVHNHPSGDPTPS 179 Query: 118 QADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 + D+ LT+ L +++ I + DHLI+G YSF EHGLL Sbjct: 180 REDRELTRTLWDTGKVMGIPLVDHLIIGDGVYYSFKEHGLL 220 >UniRef50_B4CZF8 DNA repair protein RadC n=2 Tax=Verrucomicrobia RepID=B4CZF8_9BACT Length = 231 Score = 160 bits (405), Expect = 1e-38, Method: Composition-based stats. Identities = 63/165 (38%), Positives = 90/165 (54%), Gaps = 8/165 (4%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEP--GVAFTSTHAVREWLRLHMAALEREE 58 +K+LS + G + P + A R E S + + L M AL RE Sbjct: 68 VKELSKIKG-VGPAKAVQLVAAFGLASRLARETLARQRLDSPELINDLLGPEMRALGRES 126 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 R++ LD + LI E + G++N + HPREV + AL ++A AVIL HNHPSG+ TPS Sbjct: 127 LRLVLLDTKYLLIRVEEISHGSLNESIAHPREVFRPALIYSAYAVILVHNHPSGDPTPSS 186 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQ-----IYSFAEHGLL 158 AD LT+RLVQ +L+ IR+ DH+I+G +SF E G++ Sbjct: 187 ADHQLTRRLVQGAELLQIRLLDHVILGTGDNGRLPYFSFKEAGII 231 >UniRef50_B9MPC4 DNA repair protein RadC n=2 Tax=Clostridia RepID=B9MPC4_ANATD Length = 232 Score = 160 bits (405), Expect = 2e-38, Method: Composition-based stats. Identities = 54/159 (33%), Positives = 82/159 (51%), Gaps = 2/159 (1%) Query: 2 KQLSFLPG--EMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEF 59 K+L + G E + LI + R + + A E+++ + E F Sbjct: 69 KELQKVKGVGENSAILISLISQISRRYLADKNRKTFQLRNVEAAAEYIKSLFVGRKNEVF 128 Query: 60 RVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQA 119 V+ LD Q +I LF GT+ V+PR+VV+ + +NA++VILAHNHP G PS Sbjct: 129 YVICLDTQLNVIYSVPLFEGTVKEAVVYPRKVVECVIRYNASSVILAHNHPGGSVRPSMD 188 Query: 120 DKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D TQ++V L + + V DH IV + YSFA++G+L Sbjct: 189 DIKTTQKIVNALSTIGVAVNDHFIVAKDEYYSFAQNGML 227 >UniRef50_B0S3Y4 UPF0758 protein FMG_0357 n=2 Tax=Finegoldia magna RepID=Y357_FINM2 Length = 223 Score = 160 bits (405), Expect = 2e-38, Method: Composition-based stats. Identities = 52/156 (33%), Positives = 80/156 (51%), Gaps = 2/156 (1%) Query: 1 MKQLSFLPGEMTPQDRRLIQ--RALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREE 58 +++L + G + ++ R L + +V E + + + E Sbjct: 64 VEELMKIKGIGMAKATSILAGIEIGRRLSLRKAMDSFSLNDPDSVAEIFCNEIGSCDVEN 123 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 F L LD +N++I+ E + GTIN++ VHPREV K A+ A ++IL HNHPSG PS Sbjct: 124 FYALLLDTKNRIISKELISKGTINQSIVHPREVFKSAIKKGANSIILVHNHPSGSLIPSN 183 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAE 154 AD +T+RL +V LV I+V DH+IV S + Sbjct: 184 ADIEVTKRLDKVGDLVGIQVLDHIIVSSNDSLSMRK 219 >UniRef50_A0Z2T6 DNA repair protein RadC n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z2T6_9GAMM Length = 223 Score = 159 bits (404), Expect = 2e-38, Method: Composition-based stats. Identities = 60/154 (38%), Positives = 82/154 (53%), Gaps = 1/154 (0%) Query: 4 LSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLY 63 L+ + + Q + A R + L E + ++L+ H RE F L+ Sbjct: 67 LTGVGRQRRYQLSCALLLATRLAEEELFERSP-LKDPGSCYKYLQHHYLLQSREVFTCLF 125 Query: 64 LDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTL 123 LD Q QL+A +F GT+N V+PRE+V AL A+A+I+AHNHPSG PS AD L Sbjct: 126 LDTQRQLLACRDMFFGTLNTAPVYPREIVAMALKMGASAIIVAHNHPSGCLAPSVADIQL 185 Query: 124 TQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGL 157 T RL + L L+DI + DHLIV + S A GL Sbjct: 186 TDRLRRALGLIDIDLLDHLIVAQGRYLSMASEGL 219 >UniRef50_B5YL92 DNA repair protein RadC n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YL92_THEYD Length = 222 Score = 159 bits (404), Expect = 2e-38, Method: Composition-based stats. Identities = 50/148 (33%), Positives = 79/148 (53%), Gaps = 1/148 (0%) Query: 11 MTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQL 70 + I A+ R L + G+ + V + + ++E F L LD + L Sbjct: 73 VGLAKACQIMAAIEFSKRFLLKEGIKIKNVDDVLKI-TEELKDKKQEYFLSLTLDGASNL 131 Query: 71 IAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQV 130 I T+F GT+N + VHPRE+ A+ AA +I HNHPSG++ PS+ D +T+RLV++ Sbjct: 132 IQKRTVFIGTLNHSIVHPREIFADAISDRAAGIIFVHNHPSGDSEPSKQDIEITKRLVEI 191 Query: 131 LQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +++ I V DH+I+ YSF G+L Sbjct: 192 GKMLGIEVIDHIIISKNGYYSFQAEGML 219 >UniRef50_C7M9C6 DNA repair protein RadC n=1 Tax=Capnocytophaga ochracea DSM 7271 RepID=C7M9C6_CAPOD Length = 225 Score = 159 bits (404), Expect = 2e-38, Method: Composition-based stats. Identities = 56/160 (35%), Positives = 82/160 (51%), Gaps = 2/160 (1%) Query: 1 MKQLSFLPGEMTPQDRRLIQ--RALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREE 58 ++QL G + ++ R EP H V ++ + L EE Sbjct: 66 LQQLQAFKGIGQAKAITILAATEMGRRRAAETPEPQPKIEVAHNVFVLMQPLIGELPHEE 125 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 F VLYL++ N++I LF+G I T V R + K AL A A+IL HNHPSG TTPS+ Sbjct: 126 FWVLYLNSTNRVIHKARLFSGGITHTTVDVRLLFKTALEQGAIALILVHNHPSGSTTPSK 185 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D LTQR+ +++DI++ DH+IV ++ SF + L Sbjct: 186 EDIELTQRVKTAGEMLDIKLLDHVIVTEKEYLSFLDERLF 225 >UniRef50_D2MNQ5 Putative DNA repair protein RadC n=1 Tax=Bulleidia extructa W1219 RepID=D2MNQ5_9FIRM Length = 223 Score = 159 bits (403), Expect = 2e-38, Method: Composition-based stats. Identities = 50/158 (31%), Positives = 87/158 (55%), Gaps = 2/158 (1%) Query: 2 KQLSFLPGE--MTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEF 59 ++L +PG + + I +R + +WL+ + +E+F Sbjct: 65 QELIQIPGISQIKALELLAIFEIVRRSSAAKLPTLPRVQHPSVLFDWLKQEIGTSLQEKF 124 Query: 60 RVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQA 119 V++L + ++++++ LF GTIN + V PRE+ K AL N+ +IL HNHPSG +PSQ Sbjct: 125 LVVFLASDQRVLSYKILFVGTINASMVFPREIFKEALLLNSPNIILVHNHPSGNLSPSQE 184 Query: 120 DKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGL 157 D +LT+R+ + QL+ ++V DH+IV +SF + G+ Sbjct: 185 DISLTKRIKEAGQLMGVKVLDHIIVTQSDYFSFVQEGI 222 >UniRef50_UPI000185C66E DNA repair protein RadC n=1 Tax=Capnocytophaga sputigena ATCC 33612 RepID=UPI000185C66E Length = 221 Score = 159 bits (403), Expect = 2e-38, Method: Composition-based stats. Identities = 52/153 (33%), Positives = 78/153 (50%), Gaps = 2/153 (1%) Query: 1 MKQLSFLPGEMTPQDRRLIQ--RALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREE 58 + QL+ G + ++ R HEP + V ++ + L EE Sbjct: 66 LAQLTTFKGIGEAKAITILAATEMGRRRAAETHEPQPKIEAPRHVFTLMQPLIGDLPHEE 125 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 F VLYL++ N++I L +G I T V R + K AL A ++IL HNHPSG TTPS+ Sbjct: 126 FWVLYLNSANRVIHKCRLSSGGITHTTVDIRLLFKNALEQGAVSLILVHNHPSGSTTPSK 185 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYS 151 D LT+R+ +DI++ DH+IV ++ YS Sbjct: 186 EDLELTERVRNAGDTLDIKLLDHIIVTEKEYYS 218 >UniRef50_B2KEG6 DNA repair protein RadC n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KEG6_ELUMP Length = 228 Score = 159 bits (403), Expect = 2e-38, Method: Composition-based stats. Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 2/159 (1%) Query: 2 KQLSFLPGEM--TPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEF 59 ++L + G T ++++ + + + V + R +A + E F Sbjct: 70 QELMEVKGVGKETALFLKVVRGVYKKYAFSKLKKADIIRTPEDVANYCRASLAEHKDEVF 129 Query: 60 RVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQA 119 V+YL +N +I E L G I+R + PR+VV+ AL A ++L HNHPSG+ +PS Sbjct: 130 EVIYLTVRNTVIGTEVLSVGAIDRASISPRKVVEGALKAKAVGIVLVHNHPSGDPSPSME 189 Query: 120 DKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D + T+ + Q +++ I V DH+IV YS + Sbjct: 190 DISFTKEVAQAARILGIMVHDHIIVVRGGYYSMRAKSQI 228 >UniRef50_C2KVW9 Possible DNA repair protein RadC n=1 Tax=Oribacterium sinus F0268 RepID=C2KVW9_9FIRM Length = 229 Score = 159 bits (403), Expect = 2e-38, Method: Composition-based stats. Identities = 50/161 (31%), Positives = 85/161 (52%), Gaps = 3/161 (1%) Query: 1 MKQLSFLPG--EMTPQDRRLI-QRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALERE 57 ++ L + G E + ++I + A R +R + E +F S +V ++ + + L E Sbjct: 69 LEDLQAIKGVGETKALELQVIGELAKRIWNRKIREEVQSFRSPGSVLQYFKEELRHLSYE 128 Query: 58 EFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPS 117 E VL+LD + QL+ L G+ N + + RE+ AL + IL HNHPSG+ PS Sbjct: 129 EVHVLFLDTKAQLLKDFLLSKGSSNASILSGREIFMEALRAASVCFILVHNHPSGDPHPS 188 Query: 118 QADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 + D+ T+ + + + + I + DH+I+G Q YSF E G + Sbjct: 189 REDERATEEIYKAGEYLGIHLMDHIIIGDNQYYSFKEQGKI 229 >UniRef50_Q0AWG3 UPF0758 protein Swol_1642 n=12 Tax=Firmicutes RepID=Y1642_SYNWW Length = 235 Score = 159 bits (403), Expect = 3e-38, Method: Composition-based stats. Identities = 56/164 (34%), Positives = 88/164 (53%), Gaps = 7/164 (4%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHL--HEPGVAFTSTHAV----REWLRLHMAAL 54 +++L+ G + I+ A+ R + + S V RE M Sbjct: 73 LEELTAEKG-IGMAKAVSIKAAIEMGRRVVGNIQLRRIIKSPEDVQEAVRELAMEEMRHY 131 Query: 55 EREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGET 114 +RE FRVLYLD + LI + + G ++ + VHPREV K A+ +AA++IL HNHPSG+ Sbjct: 132 DREHFRVLYLDRKGGLITMQDISIGGLHSSIVHPREVFKTAVKKSAASMILVHNHPSGDP 191 Query: 115 TPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 TPSQ D +T+RL++ +++ I + DH+I+G S GL+ Sbjct: 192 TPSQEDIEITRRLIEAGKIMGIEILDHVIIGEINYCSLKARGLI 235 >UniRef50_Q2GL92 DNA repair protein RadC n=12 Tax=Rickettsiales RepID=Q2GL92_ANAPZ Length = 232 Score = 159 bits (403), Expect = 3e-38, Method: Composition-based stats. Identities = 52/160 (32%), Positives = 88/160 (55%), Gaps = 2/160 (1%) Query: 1 MKQLSFLP--GEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREE 58 + +L + G+ + ++ AL + R V + ++L++ + E Sbjct: 73 INELRKVKDMGDSSVAMLVCVREALIRVMRGNITSCVMLDKWPKLIDYLKVKIGNSTIEN 132 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 F VLYL+ + LIA E TGT++ T ++ REV+++AL A ++++HNHPSG+ PS+ Sbjct: 133 FLVLYLNKRYSLIADEVQSTGTVDETPLYIREVIRKALLCGAVYIVISHNHPSGDPKPSK 192 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 AD +T +L +DI + DH+IV ++ YSF HGLL Sbjct: 193 ADINVTNKLRIACNSMDIELVDHVIVTSKRHYSFKTHGLL 232 >UniRef50_A1B298 DNA repair protein RadC n=7 Tax=Bacteria RepID=A1B298_PARDP Length = 162 Score = 159 bits (402), Expect = 3e-38, Method: Composition-based stats. Identities = 54/155 (34%), Positives = 88/155 (56%), Gaps = 2/155 (1%) Query: 4 LSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLY 63 + P + Q++ ++ A + L RHL++ TS AV ++ L + + E F VLY Sbjct: 10 IEAQPHRFSAQEQAVVYEARQILLRHLNQ-NPVLTSWQAVLDYCALTIRG-DVERFHVLY 67 Query: 64 LDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTL 123 LD +N+LI+ E L GT++ V+PREV++R L NA+A+I+ HNHP+G+ PS AD + Sbjct: 68 LDRRNRLISDECLAIGTVDHVPVYPREVLRRCLALNASALIIVHNHPAGDPEPSAADFAM 127 Query: 124 TQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 T+ + + + + DH+I G + S G L Sbjct: 128 TKEIRNASASLGVILHDHIITGAGRETSLRARGEL 162 >UniRef50_C4FYP9 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4FYP9_ABIDE Length = 240 Score = 159 bits (402), Expect = 3e-38, Method: Composition-based stats. Identities = 52/158 (32%), Positives = 83/158 (52%), Gaps = 2/158 (1%) Query: 2 KQLSFLPG--EMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEF 59 K+L + G + + I R + R H + + + M + E Sbjct: 70 KELCNIQGVGPVKAVEIICICELARRIARTRHSYDEPLDTAAKISKRYMEEMRHFKEEHV 129 Query: 60 RVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQA 119 +L LD + +LI T+ GTIN++ + PREV +AL + A ++L HNHPSG+ TPS+A Sbjct: 130 VLLLLDIKCRLIKELTISIGTINQSFLRPREVFIQALKYEAVNLVLIHNHPSGDPTPSKA 189 Query: 120 DKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGL 157 D +T ++++V +LV I + DH+I+G SF E GL Sbjct: 190 DIIVTDKILEVSELVGIPLVDHIIIGDCCYVSFREKGL 227 >UniRef50_C7PSZ0 DNA repair protein RadC n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PSZ0_CHIPD Length = 237 Score = 159 bits (402), Expect = 3e-38, Method: Composition-based stats. Identities = 47/160 (29%), Positives = 73/160 (45%), Gaps = 2/160 (1%) Query: 1 MKQLSFLPGEMTPQDRRLI--QRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREE 58 ++QL + G T + ++I R + + + E Sbjct: 77 LEQLKKIQGIGTAKATKIIAVMELARRRQAGCMLQKKTIRQGRDAALYFKPLLGDAALES 136 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 F VLYL++ ++++ H + G I T V P+ + + AL A VIL HNHPSG PS Sbjct: 137 FHVLYLNHASRVLQHRCISIGGITGTIVDPKVIFREALELGATQVILCHNHPSGNLRPST 196 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 AD +T++L +L+DI V DH+IV S E G + Sbjct: 197 ADIQITEKLKAAGRLLDISVLDHIIVSEAGYCSMVEEGFI 236 >UniRef50_UPI0001C34E02 DNA repair protein RadC n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001C34E02 Length = 243 Score = 159 bits (402), Expect = 4e-38, Method: Composition-based stats. Identities = 42/158 (26%), Positives = 79/158 (50%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 + + + Q + + + R + +F ++ + M +E+EE Sbjct: 86 LTAVKGIGRVKGLQLLCIGELSRRIWKTLAQKEIKSFDGPESIAAFYMEDMRHMEQEELH 145 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 ++ + +N LI LF GT+N + RE+ AL ++A + L HNHPSG+ +PS D Sbjct: 146 LMMFNTKNMLIRESCLFRGTVNASVASAREIFIEALRYHAVRLALVHNHPSGDPSPSGED 205 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 LT+++ Q +L+ + + DH+I+G +SF E G++ Sbjct: 206 IRLTRQVAQAGELLGVTLLDHVIIGDNSYFSFKERGII 243 >UniRef50_Q2S8K4 DNA repair protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S8K4_HAHCH Length = 207 Score = 159 bits (402), Expect = 4e-38, Method: Composition-based stats. Identities = 68/143 (47%), Positives = 91/143 (63%), Gaps = 2/143 (1%) Query: 17 RLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETL 76 ++I A LD G AF A + +L L +A E+E F ++LDNQN+LI+ E L Sbjct: 64 KIISIAKHILDGRFFR-GKAFCDPDATKYYLVLQLAEHEQEVFACMFLDNQNRLISFEKL 122 Query: 77 FTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDI 136 F GTI++ V+PRE+VKRAL NAAAVILAHNHPSG + PS AD +T+ + L L+D+ Sbjct: 123 FYGTIDQASVYPREIVKRALMLNAAAVILAHNHPSGMSEPSVADIAMTKTVKSSLALIDV 182 Query: 137 RVPDHLIVG-GRQIYSFAEHGLL 158 RV DH++VG SF E G + Sbjct: 183 RVLDHIVVGSDGSSVSFIERGYM 205 >UniRef50_A8YUM9 DNA repair protein RadC n=9 Tax=Lactobacillus RepID=A8YUM9_LACH4 Length = 207 Score = 159 bits (402), Expect = 4e-38, Method: Composition-based stats. Identities = 46/156 (29%), Positives = 81/156 (51%), Gaps = 1/156 (0%) Query: 4 LSFLPGEMTPQDRRL-IQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVL 62 + F+ G + + + L + S+ V +L + ++EE L Sbjct: 52 VQFITGPNCSSSLAITAEEVMDRLRMASSKRKPVLASSVEVGTYLADKLVGHKQEELWAL 111 Query: 63 YLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKT 122 Y+DN N+++A + +F GT+N++ HPRE+ + A+ ++ + + +AHNHPSG+ PS D Sbjct: 112 YVDNGNRIVAEKKIFQGTLNKSVAHPREIFRWAVIYDCSGIFIAHNHPSGKLIPSSNDFE 171 Query: 123 LTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 LT+ L + +++ I + DH IVG Q S E L Sbjct: 172 LTKDLYRAAKMMKIDLLDHFIVGQGQYLSMREKELF 207 >UniRef50_D1R5B1 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R5B1_9CHLA Length = 238 Score = 158 bits (401), Expect = 4e-38, Method: Composition-based stats. Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 2/159 (1%) Query: 1 MKQLSFLPG--EMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREE 58 +++L + G + + L R + ++ + +E Sbjct: 72 IEELCQIKGLGTAKAIQLKAALNLGKRLSRTQVSAKFQIRTPLHAYHLVKDDLEKAMQEH 131 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 F + D + +I T+ GT+ T VHPREV A+ AA++IL HNHPSG+ TPS+ Sbjct: 132 FLTILQDVKGYVICSPTVALGTLTATVVHPREVFYPAIRHRAASLILVHNHPSGDPTPSK 191 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGL 157 D +T+ LV V +LV I V DH+I+G + S E G Sbjct: 192 EDLDVTKTLVAVGRLVGICVNDHIIIGRDRYVSLREEGF 230 >UniRef50_Q5FNC4 DNA repair protein RadC n=1 Tax=Gluconobacter oxydans RepID=Q5FNC4_GLUOX Length = 216 Score = 158 bits (401), Expect = 4e-38, Method: Composition-based stats. Identities = 55/159 (34%), Positives = 88/159 (55%), Gaps = 2/159 (1%) Query: 2 KQLSFLP--GEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEF 59 ++L + G R++Q A +R P + + ++L +A E+F Sbjct: 58 RELESISDMGMHMLPMIRVLQEAALRYNRARLPPEDVLDNEQKLLDYLTARLARENIEQF 117 Query: 60 RVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQA 119 R+L+L+ +N LIA E GT+N T V+PREV +RA+ A A++L HNHPSG+ TPS+A Sbjct: 118 RILFLNEKNSLIADEAQARGTVNHTPVYPREVARRAVEIGATALVLVHNHPSGDPTPSEA 177 Query: 120 DKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D +T ++ L++V + + DH I+G + SF LL Sbjct: 178 DLQMTMQVQAALEVVGVTIADHFIIGNGRHTSFRRSNLL 216 >UniRef50_D1VVJ8 DNA repair protein RadC-like protein n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VVJ8_9FIRM Length = 236 Score = 158 bits (401), Expect = 4e-38, Method: Composition-based stats. Identities = 52/160 (32%), Positives = 88/160 (55%), Gaps = 2/160 (1%) Query: 1 MKQLSFLPGEMTPQDRRLIQRA--LRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREE 58 M +L+ + G + ++ L+ TS +++ M LE E Sbjct: 76 MDKLTAIKGVGQAKAAMIMAALTLAERLNSSSIYDKKKITSPEDAAKYVMASMRDLETEV 135 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 FR++ L+ + ++ + G IN T VHPREV ++A+ A ++IL HNHP+G+ +PSQ Sbjct: 136 FRIIILNTKKEIKYIREISHGIINMTVVHPREVFRQAISDGAHSIILLHNHPTGDPSPSQ 195 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D+ LT+RLV+V ++V I + DH+I+G +SF + G+L Sbjct: 196 EDRNLTRRLVEVSKIVGIDICDHIIIGDNTFFSFLKEGIL 235 >UniRef50_C4LDH2 DNA repair protein RadC n=2 Tax=Aeromonadaceae RepID=C4LDH2_TOLAT Length = 165 Score = 158 bits (401), Expect = 4e-38, Method: Composition-based stats. Identities = 67/148 (45%), Positives = 91/148 (61%) Query: 11 MTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQL 70 +P + I R L ++ G + + +L+ M E E F L+LDNQ+++ Sbjct: 18 ASPVTEKDILIMARRLAKNRLAKGCSIERPSSAFIYLQALMGNYENEVFGSLFLDNQHRI 77 Query: 71 IAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQV 130 I E LF GT+N T +HPREVVKRAL NAAAVI HNHPSGE PS+ADK +T +L + Sbjct: 78 ICFEELFRGTLNVTNIHPREVVKRALAVNAAAVIFVHNHPSGEPEPSEADKKITVQLRET 137 Query: 131 LQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 L L+D+RV DH++VG + S AE GL+ Sbjct: 138 LNLIDVRVLDHIVVGAKACISMAERGLV 165 >UniRef50_B4S9N8 DNA repair protein RadC n=1 Tax=Prosthecochloris aestuarii DSM 271 RepID=B4S9N8_PROA2 Length = 165 Score = 158 bits (401), Expect = 4e-38, Method: Composition-based stats. Identities = 57/125 (45%), Positives = 80/125 (64%), Gaps = 1/125 (0%) Query: 35 VAFTSTHAVREWL-RLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVK 93 A T ++ ++ + EEF LYLD +N++I E + GT+N + VHPREV K Sbjct: 41 PAITRCDIAYDFFCKIGLQDKASEEFYALYLDTKNKIIGLEMISRGTLNASLVHPREVFK 100 Query: 94 RALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFA 153 A NA +++LAHNHPSG T PS ADK +T RLV+ +L+D++V DH+IVG + YSF Sbjct: 101 GAFLANANSIMLAHNHPSGNTEPSSADKLVTSRLVKAGKLLDLQVLDHIIVGDKGYYSFR 160 Query: 154 EHGLL 158 E GL+ Sbjct: 161 ESGLI 165 >UniRef50_C9LLN8 DNA repair protein RadC n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLN8_9FIRM Length = 227 Score = 158 bits (401), Expect = 5e-38, Method: Composition-based stats. Identities = 42/155 (27%), Positives = 78/155 (50%) Query: 4 LSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLY 63 + + + ++ R H + F+ AV + + ++E F V + Sbjct: 73 VKGVGQDKAITVCAAVELGRRLAQFHNKKQLENFSFPEAVASYFMEKLRHEDQEHFIVCF 132 Query: 64 LDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTL 123 L+ +N+L+ ++ + G+++ V +E ++ AL F A +IL HNHPSG PS AD L Sbjct: 133 LNTKNRLLGYKEICVGSLDAAPVDIKEAMRWALRFKAHGMILVHNHPSGYPEPSDADINL 192 Query: 124 TQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 T++ + DIR+ DH+I+G + S ++GL+ Sbjct: 193 TRQFRRATSFFDIRLLDHVIIGDGEFASLNKNGLV 227 >UniRef50_C2BCF6 DNA repair protein RadC n=2 Tax=Anaerococcus RepID=C2BCF6_9FIRM Length = 226 Score = 158 bits (400), Expect = 5e-38, Method: Composition-based stats. Identities = 49/161 (30%), Positives = 93/161 (57%), Gaps = 3/161 (1%) Query: 1 MKQLSFLPGEMTPQDRRLI---QRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALERE 57 +++L+ + G + +++ Q R ++ L++ S E+++ ++ +RE Sbjct: 66 VEELTKINGIKEAKASKIVASLQFGKRIKEKILNKKKYQINSNEEAYEFIKDTISLKDRE 125 Query: 58 EFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPS 117 F + L+N+N++I+ E + G ++ + V+PREV K A+ +A ++ILAHNHPSG +PS Sbjct: 126 YFYTILLNNKNEVISKELISIGDLSSSIVNPREVFKPAIKKSAKSMILAHNHPSGNPSPS 185 Query: 118 QADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +AD +T RL+ +++DI V DHLI+G S + + Sbjct: 186 KADLLITHRLIDAGEILDITVLDHLIIGHGTYVSLKKDNYI 226 >UniRef50_C7GYN9 DNA repair protein RadC n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GYN9_9FIRM Length = 230 Score = 158 bits (400), Expect = 5e-38, Method: Composition-based stats. Identities = 48/161 (29%), Positives = 74/161 (45%), Gaps = 4/161 (2%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEP---GVAFTSTHAVREWLRLHMAALERE 57 ++ L G + RLI AL R + A+ + ++E Sbjct: 65 LEDLMNFNGIGEAKAMRLI-AALELGKRQSEISVNIKRKIGNPEAIFHLFHEKLRYEKKE 123 Query: 58 EFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPS 117 F + L+ +IA E + G + HPREV K A+ A++VIL HNHPSG TPS Sbjct: 124 NFYAVMLNTAKHVIAKERISIGGLACAYAHPREVFKSAIKKAASSVILVHNHPSGCVTPS 183 Query: 118 QADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D +T+RL+ +++ I V DH+I+G S + G + Sbjct: 184 DEDVLITKRLINAGRIIGIEVIDHIIIGNENYLSMKKEGYI 224 >UniRef50_A9I305 DNA repair protein radC homolog n=3 Tax=Proteobacteria RepID=A9I305_BORPD Length = 177 Score = 158 bits (400), Expect = 6e-38, Method: Composition-based stats. Identities = 54/149 (36%), Positives = 83/149 (55%) Query: 8 PGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQ 67 G + A R L + +AV+ + + ++ + E VLYL++Q Sbjct: 27 SGRYQAATDSHVLAAARVAAESLIGDRADMGNPNAVKHYFQAKLSGMGHEVAAVLYLNSQ 86 Query: 68 NQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRL 127 ++I + + GT+ + V+PRE+VK AL +AAA+I++HNHPSG PS+AD LT+ L Sbjct: 87 FKVIRYMEMSHGTLTQASVYPREIVKTALRLDAAAIIMSHNHPSGIPEPSEADLALTRHL 146 Query: 128 VQVLQLVDIRVPDHLIVGGRQIYSFAEHG 156 L LVD+R+ DH+IV G+ S AE G Sbjct: 147 KHALALVDVRLVDHIIVTGQNTTSLAERG 175 >UniRef50_B1HKP9 DNA repair protein n=1 Tax=Burkholderia pseudomallei S13 RepID=B1HKP9_BURPS Length = 165 Score = 158 bits (400), Expect = 6e-38, Method: Composition-based stats. Identities = 65/149 (43%), Positives = 96/149 (64%) Query: 10 EMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQ 69 +T + +LI A+ L+R L + G A TS ++LRL M +RE F V++LD ++ Sbjct: 17 TLTSAEHQLIHDAIAVLERRLFQRGPALTSPQNAIDYLRLTMTREDREVFTVIFLDTHHR 76 Query: 70 LIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQ 129 +IA E LF G I+ + R ++ RA+ N+ A+I+AHNHPSGET PS AD+ LT L Sbjct: 77 VIAVEPLFYGGIDGAHISSRVILHRAILLNSTAIIVAHNHPSGETQPSPADQRLTAELAA 136 Query: 130 VLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +L+LVD+R+ DH I+G + +SFA+ GLL Sbjct: 137 LLRLVDMRLLDHFIIGRGEPFSFAQAGLL 165 >UniRef50_A3ER13 DNA repair protein (RadC) n=3 Tax=Leptospirillum RepID=A3ER13_9BACT Length = 237 Score = 157 bits (399), Expect = 7e-38, Method: Composition-based stats. Identities = 51/158 (32%), Positives = 79/158 (50%), Gaps = 1/158 (0%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 + LS + Q I+ R + S V + L + ++E F Sbjct: 75 LSSLSGMGLAKAAQIMAGIELG-RRVSGKARSFRPEIRSARDVYDILGARLRDEKKESFW 133 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 VL LD +++L + G+++ T VHPRE + A+ +AAAV+ HNHPSG+ PS D Sbjct: 134 VLLLDQRHRLQNAVRISEGSLSMTLVHPREAFQPAIRDSAAAVLFVHNHPSGDPEPSSDD 193 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +LT+RL + +L+ IRV DH+++G S E G L Sbjct: 194 WSLTERLKECGELLGIRVLDHVVLGDHAWVSLEERGGL 231 >UniRef50_C0GE80 DNA repair protein RadC n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GE80_9FIRM Length = 189 Score = 157 bits (399), Expect = 7e-38, Method: Composition-based stats. Identities = 50/159 (31%), Positives = 88/159 (55%), Gaps = 4/159 (2%) Query: 2 KQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFT--STHAVREWLRLHMAALEREEF 59 K+L +PG + P+ + ++ L + T S V E + ++A E E Sbjct: 33 KELLRVPG-LGPRKAKQLKAVFDLSKALLEPDDTSITIQSPADVFENFK-YLALHEEEYL 90 Query: 60 RVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQA 119 L+L+ +N+++ H T+ GT+N + +HPREV A+ A+V++ HNHPSG+ TPS+ Sbjct: 91 VALFLNTKNKILQHTTISKGTLNTSLIHPREVFAPAIRIKCASVVILHNHPSGDPTPSRE 150 Query: 120 DKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D +T+RL + +++ I + DH+++G + S E LL Sbjct: 151 DIDITKRLKEAGKIIGIELLDHIVIGNKGFVSLREKSLL 189 >UniRef50_A1K759 DNA repair protein n=2 Tax=Rhodocyclaceae RepID=A1K759_AZOSB Length = 196 Score = 157 bits (398), Expect = 9e-38, Method: Composition-based stats. Identities = 62/156 (39%), Positives = 81/156 (51%) Query: 3 QLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVL 62 +L+ P L S VR++LR E F VL Sbjct: 41 ELAREPRTPAWDALACAIEILHRSFAEQLSARNVLDSPGVVRQFLRTFFEGKPYEIFVVL 100 Query: 63 YLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKT 122 YLD QN+LI E F GT+ +T V+PRE+++R+L +AA VI +H HPSG PS AD+ Sbjct: 101 YLDAQNRLIRAEEAFRGTLTQTSVYPREILRRSLELHAAGVIFSHQHPSGVCEPSSADEV 160 Query: 123 LTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 LT L L LVD+RV DH++V G + SFAE G L Sbjct: 161 LTNMLKSALTLVDVRVLDHIVVAGDRAVSFAETGRL 196 >UniRef50_B1I0K4 DNA repair protein radC-like protein n=1 Tax=Lysinibacillus sphaericus C3-41 RepID=B1I0K4_LYSSC Length = 204 Score = 157 bits (398), Expect = 1e-37, Method: Composition-based stats. Identities = 44/157 (28%), Positives = 86/157 (54%), Gaps = 1/157 (0%) Query: 3 QLSFLP-GEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRV 61 +L + R ++ L+ ++ + ++ E++ M L++E F Sbjct: 48 ELQDIGLSRKEALRIRAVKGLLKIMNSERQGKVKSISNASEAAEYVMDEMKNLKQEHFVC 107 Query: 62 LYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADK 121 L+LD ++++I ET+F G++N + PRE+++ AL ++AA +I HNH SG++ PS D Sbjct: 108 LFLDTRSRVIKKETIFIGSLNSSIASPREIMRLALKYSAAGIICLHNHCSGDSEPSMQDL 167 Query: 122 TLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +T+RL + L+ + + DH+++G + S E+ LL Sbjct: 168 EVTRRLFEAGDLMGVELIDHIVIGNNEFTSIRENNLL 204 >UniRef50_B1JAY7 DNA repair protein RadC n=4 Tax=Pseudomonas RepID=B1JAY7_PSEPW Length = 164 Score = 157 bits (397), Expect = 1e-37, Method: Composition-based stats. Identities = 61/147 (41%), Positives = 93/147 (63%) Query: 12 TPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLI 71 ++ LI AL+ LD+ + G + +L+L +A E F +L LD++++++ Sbjct: 18 RAREDALITGALQLLDQRHFQRGEVLITPADAAAYLKLQLAPYHHEVFALLCLDSRHRVL 77 Query: 72 AHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVL 131 + + LFTG+I+ V+PR+VV +AL NAAAVI +HNHPSG + PS AD+ LT RL + L Sbjct: 78 SFDILFTGSIDGASVYPRQVVIKALERNAAAVIFSHNHPSGCSEPSGADRVLTTRLTEAL 137 Query: 132 QLVDIRVPDHLIVGGRQIYSFAEHGLL 158 LV++RV DH+IVG S AE+G + Sbjct: 138 ALVEVRVLDHIIVGEGTPLSLAEYGWM 164 >UniRef50_C2E2B4 DNA repair protein RadC n=8 Tax=Lactobacillus jensenii RepID=C2E2B4_9LACO Length = 207 Score = 157 bits (397), Expect = 1e-37, Method: Composition-based stats. Identities = 50/137 (36%), Positives = 82/137 (59%) Query: 22 ALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTI 81 L+ L + F S+H V ++L +E+E+ V+YLDN+N+++ LF GT+ Sbjct: 71 LLKRLKAVRTRKLIQFVSSHEVGKYLIDRFLGVEQEQLVVIYLDNKNKVLGERLLFQGTV 130 Query: 82 NRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDH 141 NR+ VHPR++ + A+ +N+ +++AHNHPSG+ PSQ D T+++ + L+ I DH Sbjct: 131 NRSVVHPRDIFRWAVFYNSVGILIAHNHPSGDANPSQKDIEFTKQINKASDLMGINFLDH 190 Query: 142 LIVGGRQIYSFAEHGLL 158 +IV R SF E L+ Sbjct: 191 IIVADRSYLSFKEEQLI 207 >UniRef50_Q042N7 DNA repair protein n=7 Tax=Lactobacillus RepID=Q042N7_LACGA Length = 206 Score = 156 bits (396), Expect = 1e-37, Method: Composition-based stats. Identities = 47/144 (32%), Positives = 79/144 (54%) Query: 15 DRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHE 74 ++Q L + ++ + S+ V ++ + +EE +YLD++N++IA + Sbjct: 63 IAVVLQLMLERVKGVNNKEIESLYSSSQVGCYIADKLCGRPQEELYGIYLDSKNKIIAEK 122 Query: 75 TLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLV 134 +F GT+NR HPR++ + A+ +N+ A +AHNHPSG+ PSQ D T++LV+ + + Sbjct: 123 LIFQGTVNRAVAHPRDIFRWAVIYNSTAFFVAHNHPSGDEQPSQHDLRFTKKLVEASKCM 182 Query: 135 DIRVPDHLIVGGRQIYSFAEHGLL 158 I DH IV SF E LL Sbjct: 183 GIDFLDHFIVTDNTYLSFREMELL 206 >UniRef50_A5FMW5 UPF0758 protein Fjoh_0413 n=33 Tax=Bacteroidetes RepID=Y413_FLAJ1 Length = 229 Score = 156 bits (396), Expect = 2e-37, Method: Composition-based stats. Identities = 55/161 (34%), Positives = 81/161 (50%), Gaps = 4/161 (2%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHE---PGVAFTSTHAVREWLRLHMAALERE 57 + QL G + I AL R E TS+ ++ + L E Sbjct: 70 VSQLIKFKG-IGEAKAVSIVAALELGRRQRAEDILKLKKITSSKDAFTIMQPIIGELPHE 128 Query: 58 EFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPS 117 EF VL+L+N N++I+ L G I T V R V K L A +IL HNHPSGE PS Sbjct: 129 EFWVLFLNNSNKVISKAQLSKGGIAGTIVDVRLVFKLGLENGATGLILCHNHPSGELNPS 188 Query: 118 QADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 QADK +T+++ +++D+++ DHLI+ + YSF + G+ Sbjct: 189 QADKQITKKIKTAGEILDVKILDHLIITETKYYSFVDEGIF 229 >UniRef50_Q2B8H5 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B8H5_9BACI Length = 228 Score = 156 bits (396), Expect = 2e-37, Method: Composition-based stats. Identities = 51/160 (31%), Positives = 87/160 (54%), Gaps = 4/160 (2%) Query: 1 MKQLSFLPGEMTPQDR--RLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREE 58 + +L L +R I A + ++ S ++ ++ ++E Sbjct: 71 IDELIELGLTKQVAERFFATILFAKK-INSMFMPEVECLRSPEDAYHAVK-YLTNEDQET 128 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 F VL LD ++QLI+ + ++ GTI+ VHPREV + AL+ +AA +I+AH HPSG +PS+ Sbjct: 129 FVVLALDTKHQLISRKEIYKGTIDAAIVHPREVFRFALNKSAAHIIVAHQHPSGNCSPSR 188 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D +T+RL +V + + I + DH+IVG + +S + G L Sbjct: 189 DDIEVTKRLRKVGEEIGIPLSDHIIVGRNKYFSMKKQGHL 228 >UniRef50_Q3JDF2 DNA repair protein RadC n=4 Tax=Gammaproteobacteria RepID=Q3JDF2_NITOC Length = 171 Score = 156 bits (396), Expect = 2e-37, Method: Composition-based stats. Identities = 69/146 (47%), Positives = 95/146 (65%), Gaps = 1/146 (0%) Query: 13 PQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIA 72 P+ + L++ A L LH+PGV S + R++LR+ +A + E F LYLDN++++I Sbjct: 27 PEKQSLLELAFAVL-HDLHQPGVELPSPNHTRDFLRMLLAERKAEVFGCLYLDNRHRVIE 85 Query: 73 HETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQ 132 LF GTI+ V+PR VV++AL NAAAV+ HNHPSG PS AD+ +T+RL + L Sbjct: 86 TVELFQGTIDGASVYPRVVVQQALSVNAAAVMFFHNHPSGVAEPSNADEAITRRLKEALA 145 Query: 133 LVDIRVPDHLIVGGRQIYSFAEHGLL 158 LVDIRV DH +V + SFAE GLL Sbjct: 146 LVDIRVLDHFVVTAGESISFAERGLL 171 >UniRef50_C0BM81 DNA repair protein RadC n=2 Tax=Bacteroidetes RepID=C0BM81_9BACT Length = 231 Score = 156 bits (396), Expect = 2e-37, Method: Composition-based stats. Identities = 59/161 (36%), Positives = 90/161 (55%), Gaps = 4/161 (2%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVA---FTSTHAVREWLRLHMAALERE 57 +++L G + + I+ +L R LH +S+ A L+ + L E Sbjct: 72 IEKLMDFKGVGKVKAIK-IKASLDFGYRLLHVNATVPLSLSSSGAAFSILKPVLIGLTYE 130 Query: 58 EFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPS 117 EF VLYLDN N LI L G T V R V+++A+ + A A+I+AHNHP+G PS Sbjct: 131 EFWVLYLDNSNVLIERSLLGKGGFTATVVDIRLVLQQAIRWGATAMIVAHNHPTGNLKPS 190 Query: 118 QADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +DK LTQ+L + +++DI++ DH+IVG + +SFA+ LL Sbjct: 191 HSDKALTQKLKEAAKVLDIKLLDHIIVGKNEYFSFADQNLL 231 >UniRef50_Q1WT78 DNA repair protein n=3 Tax=Lactobacillus RepID=Q1WT78_LACS1 Length = 225 Score = 156 bits (396), Expect = 2e-37, Method: Composition-based stats. Identities = 49/167 (29%), Positives = 88/167 (52%), Gaps = 9/167 (5%) Query: 1 MKQLSFLPGEMTP------QDRRLIQRALRALDRHLHEPGVAFT---STHAVREWLRLHM 51 + +L F E + +I+ +R+ + G+ S+ ++ + Sbjct: 57 LNELQFFSDEGLKNLCKDDEKVAIIRALREFSERYKEKEGLVLGQIFSSCMFGNYMIDKI 116 Query: 52 AALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPS 111 ++E + LD +NQ+++ + +F GT+N VHPRE+ K AL+F+ A +++AHNHPS Sbjct: 117 GDSKQELLVCVCLDTKNQVLSEKVIFKGTLNSATVHPREIFKHALNFSCARILVAHNHPS 176 Query: 112 GETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 G PS+ D LT+RL+ +++ I + DH+IVG S AE ++ Sbjct: 177 GNVEPSENDIQLTKRLINAGKMIGIELIDHVIVGSEVYLSLAEEKIV 223 >UniRef50_C9NPT2 DNA repair protein RadC n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NPT2_9VIBR Length = 224 Score = 156 bits (395), Expect = 2e-37, Method: Composition-based stats. Identities = 57/148 (38%), Positives = 86/148 (58%), Gaps = 1/148 (0%) Query: 11 MTPQDRRLIQRALRALDRHLHEPGV-AFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQ 69 + D+ ++Q A + R+ + + V+ + + H+A ++RE F L+LDN + Sbjct: 76 FSAHDQAVLQEAKDIIARYWAARSPNVLNAPNLVKMYCQCHLAHVDREVFGALWLDNGLR 135 Query: 70 LIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQ 129 + LF G++N VH REV++ L NAAAVI HNHPSG+ +PSQAD+ LT L Sbjct: 136 ALGTVDLFAGSLNHAAVHTREVLRSGLRLNAAAVIFYHNHPSGDPSPSQADRQLTNHLKD 195 Query: 130 VLQLVDIRVPDHLIVGGRQIYSFAEHGL 157 VL ++IRV DH++V + SFAE G Sbjct: 196 VLGQIEIRVLDHMVVSLSGVVSFAERGW 223 >UniRef50_A6DS55 DNA repair protein RadC n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DS55_9BACT Length = 235 Score = 156 bits (395), Expect = 2e-37, Method: Composition-based stats. Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 8/166 (4%) Query: 1 MKQLSFLPG--EMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREE 58 ++ L + G R + R L + +L +A +EE Sbjct: 68 LEDLETIHGVGPAKATSLRAVFALARKLVAEEAMEQFTIHRPESAAPYLIQLLAGKSKEE 127 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 F +L LD +N+L+ + G ++R+ VHPREV + AL + A +ILAHNHPSG+ +PS Sbjct: 128 FHILLLDTKNRLMRSSQISIGLLDRSHVHPREVFREALRYGTAKIILAHNHPSGDPSPSP 187 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGR------QIYSFAEHGLL 158 D T+ L++ +++ ++V DHLI+G + Q S + GL+ Sbjct: 188 QDIECTKNLIEAGEILGVKVVDHLIIGHKLPGDSRQFVSLRQLGLV 233 >UniRef50_C7JGI7 DNA repair protein RadC n=8 Tax=Acetobacter pasteurianus RepID=C7JGI7_ACEP3 Length = 249 Score = 156 bits (395), Expect = 2e-37, Method: Composition-based stats. Identities = 53/157 (33%), Positives = 88/157 (56%), Gaps = 1/157 (0%) Query: 2 KQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRV 61 K + LP + L + A + R + + +LR M +RE+ RV Sbjct: 94 KSIKALPEAVR-VLLMLAREAGLRIQRARLRRSGILADSTQLYAYLRAVMGPEKREQVRV 152 Query: 62 LYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADK 121 L+L+++++L+A + + GT++ T V+PRE+V RAL NA ++L HNHPSG+ TPS D Sbjct: 153 LFLNDKHELLADDVMGQGTVDHTPVYPREIVARALQLNATMLVLVHNHPSGDPTPSADDV 212 Query: 122 TLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +T ++ ++++I V DH+IV G ++ S E G L Sbjct: 213 VMTTQICGAAKIMNIHVWDHIIVAGEKLLSMREAGFL 249 >UniRef50_A1SR15 UPF0758 protein Ping_0056 n=2 Tax=Gammaproteobacteria RepID=Y056_PSYIN Length = 225 Score = 156 bits (395), Expect = 2e-37, Method: Composition-based stats. Identities = 57/150 (38%), Positives = 86/150 (57%) Query: 9 GEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQN 68 G+ + + + G A TS + +L M L E F + LD Q+ Sbjct: 76 GQAKYVQLQAVLEMSSRYLQEPLSKGNALTSAAQTKAFLIAKMHNLPYEVFAAILLDTQH 135 Query: 69 QLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLV 128 ++I F G+I+ VHPR + ++ L NAAA+IL HNHPSG+ + S+ADK +TQ++V Sbjct: 136 RIIRFHEFFFGSIDCATVHPRIIAQKVLSENAAAIILVHNHPSGDPSASEADKMITQKIV 195 Query: 129 QVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 LQL+D+RV DHL+VG ++ SFAE+G + Sbjct: 196 SALQLIDVRVLDHLVVGHKKCTSFAENGWI 225 >UniRef50_Q1DAY3 DNA repair protein RadC n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1DAY3_MYXXD Length = 241 Score = 156 bits (394), Expect = 3e-37, Method: Composition-based stats. Identities = 47/120 (39%), Positives = 68/120 (56%) Query: 39 STHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHF 98 + + +L + AL RE F VL + +N L+ + GT+N V PREV AL Sbjct: 104 TPKEIAAYLAPVLGALRREVFHVLCFNARNVLVHDARVAEGTMNTCPVDPREVFAAALTS 163 Query: 99 NAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 A +++LAHNHPSG+ PS D LT+ LV QL++I+V DH+++G S E GL+ Sbjct: 164 RATSIVLAHNHPSGDPEPSVQDLGLTRHLVAGAQLLNIKVLDHVVMGDGGYVSMLERGLM 223 >UniRef50_Q31EB6 UPF0758 protein Tcr_1917 n=5 Tax=Gammaproteobacteria RepID=Y1917_THICR Length = 225 Score = 156 bits (394), Expect = 3e-37, Method: Composition-based stats. Identities = 65/151 (43%), Positives = 88/151 (58%), Gaps = 1/151 (0%) Query: 9 GEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQN 68 G+ + + R + G A T V L+ H+ RE F ++ LD QN Sbjct: 75 GQAKYVQLKAVLEMSRRHFESGLKKGEALTQPEKVARLLQHHIGHQSREIFGLVLLDQQN 134 Query: 69 QLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLV 128 Q I LFTGTIN+ VH REV+K L +AAAVILAHNHPSG+ TPSQ+D+ LT ++ Sbjct: 135 QFIQFVPLFTGTINQATVHIREVLKTVLDHHAAAVILAHNHPSGDPTPSQSDRDLTHQIQ 194 Query: 129 QVLQLVDIRVPDHLIVGG-RQIYSFAEHGLL 158 Q LQL++ R DH+I+G + YSF + G+L Sbjct: 195 QGLQLIETRCLDHIILGDHGRWYSFTQQGIL 225 >UniRef50_A9HJN5 DNA repair protein RadC n=1 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=A9HJN5_GLUDA Length = 221 Score = 156 bits (394), Expect = 3e-37, Method: Composition-based stats. Identities = 57/141 (40%), Positives = 84/141 (59%) Query: 18 LIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLF 77 L++ A L R G + A+ +L+ +A E+FRVL+LD +LIA E L Sbjct: 81 LLREAAIRLMRARIRQGDLLSCHDALMAYLQASLARDTVEQFRVLFLDRGTRLIADEVLA 140 Query: 78 TGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIR 137 GTI++T V+PREV++RA+ A+ +IL HNHP TPS+ D +T+RL Q+ ++ + Sbjct: 141 QGTIDQTPVYPREVMRRAIQLKASELILVHNHPGWNPTPSREDIAMTRRLAQIATVLGLT 200 Query: 138 VPDHLIVGGRQIYSFAEHGLL 158 V DH+IVG SF + GLL Sbjct: 201 VRDHVIVGNGASISFRQAGLL 221 >UniRef50_D1QST5 DNA repair protein RadC n=13 Tax=Bacteroidales RepID=D1QST5_9BACT Length = 234 Score = 156 bits (394), Expect = 3e-37, Method: Composition-based stats. Identities = 52/161 (32%), Positives = 76/161 (47%), Gaps = 4/161 (2%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRH---LHEPGVAFTSTHAVREWLRLHMAALERE 57 ++QL G + P I A R E + S+ A+ E+L M L+ E Sbjct: 75 IRQLEQYKG-VGPAKAITILAACELGKRRAMEKAEERQSIDSSKAIYEYLHPRMQDLDVE 133 Query: 58 EFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPS 117 E V+ L+ +LI + G I+ T V R ++K AL NA + LAHNHPS PS Sbjct: 134 EAWVMLLNQHYKLIKALRISHGGISETAVDVRIILKEALLCNATVLALAHNHPSNHAQPS 193 Query: 118 QADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D LTQR+ + + + I DH+I+ YS+ + G L Sbjct: 194 GPDDQLTQRVKKACEALRIYFLDHVIITDGTYYSYHDSGRL 234 >UniRef50_C4ZA49 DNA repair protein RadC n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZA49_EUBR3 Length = 229 Score = 156 bits (394), Expect = 3e-37, Method: Composition-based stats. Identities = 39/159 (24%), Positives = 79/159 (49%), Gaps = 2/159 (1%) Query: 2 KQLSFLPGE--MTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEF 59 ++L +PG + + I + + + + + ++ M L E Sbjct: 71 EELLSIPGIGQIKAIQLKAIAELSLRIAKTKKVQSIRMNNPQTIADYYMEQMRHLTNEVV 130 Query: 60 RVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQA 119 Y D +++ + + + G+++ + V +++ AL NA+ ++L HNHPSG+ TPS+ Sbjct: 131 ICAYFDVKSRFLGDKFISKGSLSSSVVDIGSIIRTALDKNASKLVLLHNHPSGDCTPSRN 190 Query: 120 DKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D +T RL++ + I + DH+I+G + YSF E+ L+ Sbjct: 191 DIAVTDRLIEGSGIFSIELCDHIIIGDNEYYSFYENKLI 229 >UniRef50_B5V5B9 RadC n=5 Tax=Firmicutes RepID=B5V5B9_BACCE Length = 168 Score = 155 bits (393), Expect = 3e-37, Method: Composition-based stats. Identities = 53/147 (36%), Positives = 74/147 (50%) Query: 12 TPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLI 71 P R I + + L S R + +RE F VL LD +NQ Sbjct: 22 RPAKRVDIVKLKMIKESSLLYKERRVKSPEDASLLFRQFLDGADREYFIVLCLDIKNQPT 81 Query: 72 AHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVL 131 G++N + VHPREV+K A+ NAA++I+AHNHPS + TPS D +T+RL++ Sbjct: 82 TINVCHIGSLNSSIVHPREVLKPAIISNAASIIVAHNHPSNDPTPSSEDLEVTKRLIEAG 141 Query: 132 QLVDIRVPDHLIVGGRQIYSFAEHGLL 158 ++V I V DHLIV S E G + Sbjct: 142 KVVGIEVLDHLIVCEESFVSLKEKGYM 168 >UniRef50_C0GMV6 DNA repair protein RadC n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GMV6_9DELT Length = 226 Score = 155 bits (393), Expect = 3e-37, Method: Composition-based stats. Identities = 50/158 (31%), Positives = 78/158 (49%), Gaps = 1/158 (0%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 ++ + + G RL DR S V R + EEF Sbjct: 70 LQAIDGI-GPGIITFFRLWGEFWARTDRSGLSTRSTLDSPEKVARLARSRLQFKSIEEFW 128 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 + +DN+N+LI E + GT+++ V PRE++ AL A+ VIL HNHP G+ PS D Sbjct: 129 AIMVDNKNRLIDFEKMSRGTVDQAPVFPREILTVALEKRASGVILLHNHPGGDPHPSFQD 188 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 + LT+++ +V + +R+ DH+I+ +SF EHG L Sbjct: 189 RELTRKIREVSTALGVRLLDHVIISEDSFFSFQEHGFL 226 >UniRef50_Q8DI83 UPF0758 protein tlr1707 n=31 Tax=Cyanobacteria RepID=Y1707_THEEB Length = 250 Score = 155 bits (393), Expect = 3e-37, Method: Composition-based stats. Identities = 53/156 (33%), Positives = 78/156 (50%), Gaps = 4/156 (2%) Query: 2 KQLSFLPGEMTPQDRRLIQRALRALDR---HLHEPGVAFTSTHAVREWLRLHMAALEREE 58 ++L +PG + P I A+ R S L + E Sbjct: 81 EELMAIPG-VGPAKATTILAAVELGKRVFQSRPGEQTIIDSPALAAAVLAADLMWQATER 139 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 F VL LD +++L+ + GT T HPRE+ + A+ NA+ +I+AHNHPSG +PSQ Sbjct: 140 FAVLLLDVRHRLLGSHVITVGTATETLAHPREIFREAVRRNASRLIIAHNHPSGNLSPSQ 199 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAE 154 AD LT++++Q QL++I V DHLI+G S E Sbjct: 200 ADLDLTKQILQAGQLMEIPVLDHLILGNGDYQSLRE 235 >UniRef50_UPI0000E0FF1E DNA repair protein RadC n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0FF1E Length = 213 Score = 155 bits (393), Expect = 4e-37, Method: Composition-based stats. Identities = 57/150 (38%), Positives = 84/150 (56%) Query: 9 GEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQN 68 G + + + + E + S + + + +E F V L+NQ+ Sbjct: 63 GPQKYKRCQAVVELHKRTGAQHVERMMKLDSVDESKAFFISQLQYYPQERFAVALLNNQH 122 Query: 69 QLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLV 128 + + ++ LF+GTIN V+PRE+VK AL +NAA VILAHNHPSG PSQAD +TQR+ Sbjct: 123 EFLHYKELFSGTINAASVYPREIVKYALDYNAANVILAHNHPSGTPEPSQADIAITQRIR 182 Query: 129 QVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 Q L L+D++V DH++VG S A+ G L Sbjct: 183 QALDLIDVQVLDHIVVGAGNAVSLAQRGCL 212 >UniRef50_UPI00016C0069 DNA repair protein RadC n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0069 Length = 225 Score = 155 bits (393), Expect = 4e-37, Method: Composition-based stats. Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 1/158 (0%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 +K + + G+M I + L + + V +E F Sbjct: 62 LKSIKGI-GKMKAIQLVAIVEIAKRLHVPKPMQLIDLKNPEDVAGLFVEEFENKFQEMFY 120 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 LYLD++ LI + GT+N T VH R+V + A+ A ++I+ HNHPSG+ PS+ D Sbjct: 121 ALYLDSKLGLIKKHCISIGTLNMTIVHARDVFRPAIEVCANSLIVVHNHPSGDPEPSKQD 180 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 T+T+ L V +++ I + DH+IVG S + G+L Sbjct: 181 ITITRDLQFVGEVIKIPLLDHVIVGDGDFRSLRQMGIL 218 >UniRef50_C0BG63 DNA repair protein RadC n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BG63_9BACT Length = 232 Score = 155 bits (393), Expect = 4e-37, Method: Composition-based stats. Identities = 52/158 (32%), Positives = 81/158 (51%), Gaps = 1/158 (0%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 + + + GE+ + + + + + S+ V E + + + L EEF Sbjct: 76 LVEFKGI-GEVKAIKLKAVVELSKRFQKQQPDKTTVLNSSKIVYESIYMDLDTLPHEEFW 134 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 +LYL+ N+L+ L G I +T V R KRA A +ILAHNHPSG TPS +D Sbjct: 135 ILYLNQSNRLLEKYRLSKGGITQTTVDLRLAFKRAFEVGATGLILAHNHPSGGLTPSSSD 194 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 + +T++ VD+R+ DHLIV + +SFA+ GLL Sbjct: 195 EQITRKFKLAAASVDLRILDHLIVSKKGYFSFADEGLL 232 >UniRef50_Q7UL21 DNA repair protein n=4 Tax=Bacteria RepID=Q7UL21_RHOBA Length = 319 Score = 155 bits (393), Expect = 4e-37, Method: Composition-based stats. Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 10/164 (6%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGV------AFTSTHAVREWLRLHMAAL 54 + +L + +T I + R TST E+ A L Sbjct: 155 VSELRHITKAVTKASYCQIMAGIELGRRATEAARERPVPIVKITSTTEATEYCAQKFAYL 214 Query: 55 E----REEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHP 110 +EEF ++ LD +++ I + GT++ + VHPREV + A+ AAAV+L HNHP Sbjct: 215 AGDAVQEEFHIVTLDTKHKPIRTHRITVGTLDSSLVHPREVFRPAIRDAAAAVLLVHNHP 274 Query: 111 SGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAE 154 SG+ TPS+ D +T+RL + +L+ I V DH++V ++ S E Sbjct: 275 SGDPTPSREDHAVTERLTEAGKLIGITVLDHIVVAKQRCLSLRE 318 >UniRef50_B0RXB0 DNA repair protein radC homolog n=3 Tax=Xanthomonas campestris pv. campestris str. B100 RepID=B0RXB0_XANCB Length = 159 Score = 155 bits (392), Expect = 5e-37, Method: Composition-based stats. Identities = 66/140 (47%), Positives = 88/140 (62%), Gaps = 1/140 (0%) Query: 18 LIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLF 77 ++ A L++ L G S +L A L E F V++LDNQ+ ++A E LF Sbjct: 20 ILLAAATILEQRLQRQG-RIHSPDQAGSYLVARCAHLSHEIFGVVFLDNQHHILAAEHLF 78 Query: 78 TGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIR 137 +GTI+ E+HPR V KRAL NAAAVIL HNHPSG PS+AD+ +TQRL + L L+DIR Sbjct: 79 SGTIDGCEIHPRVVAKRALELNAAAVILFHNHPSGNPEPSEADRKVTQRLQEALGLLDIR 138 Query: 138 VPDHLIVGGRQIYSFAEHGL 157 V DHL++GG++ S A G Sbjct: 139 VLDHLVIGGQKSVSLAARGW 158 >UniRef50_B9XSW5 DNA repair protein RadC n=1 Tax=bacterium Ellin514 RepID=B9XSW5_9BACT Length = 244 Score = 154 bits (391), Expect = 6e-37, Method: Composition-based stats. Identities = 53/166 (31%), Positives = 85/166 (51%), Gaps = 8/166 (4%) Query: 1 MKQLSFLPGEM--TPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREE 58 + L + G + R + L G + A+ + LR + E E Sbjct: 78 LADLCKVKGIGRDKAIALKSAFTLARRMAAELKPEGTVLDNPEAIADLLREENRSYEVEN 137 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 F+V+ L+ + +LI E + GT++ +HPREV K A+ NA+A++LAHNHPSG+ TPS+ Sbjct: 138 FQVVLLNTRRKLIRVENITQGTLDTLLIHPREVFKSAISANASAIVLAHNHPSGDPTPSE 197 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGG------RQIYSFAEHGLL 158 AD +T+ L++ QL+ I + DH+I+G + S E G Sbjct: 198 ADIKVTRDLIRAGQLLKIEILDHIILGRRTNERPKDYASLRELGYF 243 >UniRef50_Q3A6E7 DNA repair protein, RadC-like n=3 Tax=Desulfuromonadales RepID=Q3A6E7_PELCD Length = 166 Score = 154 bits (391), Expect = 6e-37, Method: Composition-based stats. Identities = 61/161 (37%), Positives = 91/161 (56%), Gaps = 5/161 (3%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPG---VAFTSTHAVREWLRLHMAALERE 57 + + L P ++I+ L G AFTS V E L + A +E Sbjct: 8 LSEPLSLIRRKLPLRLKVIRPVFETLKVKELPAGYLDEAFTSPRKVAEML-AFLKAESKE 66 Query: 58 EFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPS 117 F L+LDN+N+L+ + + G+++ + VHPREV K AL +AA ++L HNHPSG+T PS Sbjct: 67 YFMALHLDNKNRLLCLDRVSVGSLSASIVHPREVFKSALLSSAAGLVLVHNHPSGQTEPS 126 Query: 118 QADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D+ +T RLV+ +++ I V DH+I+G +SFAE GLL Sbjct: 127 HEDEEVTTRLVKAGEMLGIHVLDHIILGDG-FFSFAEQGLL 166 >UniRef50_A9IEU5 Putative DNA repair protein n=1 Tax=Bordetella petrii DSM 12804 RepID=A9IEU5_BORPD Length = 174 Score = 154 bits (391), Expect = 7e-37, Method: Composition-based stats. Identities = 60/155 (38%), Positives = 87/155 (56%) Query: 4 LSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLY 63 + G M P R I R L G ++ + +L+L +A LE E ++ Sbjct: 20 VREADGAMRPAQRAEILAVARELVSIDTLHGEDLSNPDKAKAFLQLRLAGLEHEVCALML 79 Query: 64 LDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTL 123 LD Q +LI + F GT+++ V+PRE++K AL NAA +++AHNHPSG SQAD+ L Sbjct: 80 LDVQLRLITYLEPFRGTLSQAPVYPREILKLALRHNAAGLMMAHNHPSGLAEASQADRQL 139 Query: 124 TQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 TQ + Q L L+D+R+ DH IV G + S A+ G L Sbjct: 140 TQAVQQALALIDVRLLDHFIVAGTTVVSMAQRGQL 174 >UniRef50_D1W0Q6 Putative DNA repair protein RadC n=2 Tax=Prevotella RepID=D1W0Q6_9BACT Length = 259 Score = 154 bits (391), Expect = 7e-37, Method: Composition-based stats. Identities = 48/159 (30%), Positives = 78/159 (49%), Gaps = 4/159 (2%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRH---LHEPGVAFTSTHAVREWLRLHMAALERE 57 +++L+ G + P I A R E +S A+ E++ M L+ E Sbjct: 99 IQELTNYKG-IGPAKAITILAACELGKRRAMEKAEERADLSSALAIYEYMHPRMQDLDVE 157 Query: 58 EFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPS 117 E +L ++ + +LI + G I+ T V R +++ A+ NA + L HNHPS + PS Sbjct: 158 EAWILLMNQRYKLIKAMRISHGGISETAVDVRVIMREAVLSNATVLALCHNHPSNQAFPS 217 Query: 118 QADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHG 156 D LT+R+ + QL+ I DH+IV + YS+ E G Sbjct: 218 TEDDRLTKRIHEASQLMRIYFLDHIIVTDGRYYSYREEG 256 >UniRef50_B2V8J4 DNA repair protein RadC n=5 Tax=Aquificales RepID=B2V8J4_SULSY Length = 229 Score = 154 bits (390), Expect = 8e-37, Method: Composition-based stats. Identities = 48/158 (30%), Positives = 83/158 (52%), Gaps = 4/158 (2%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 +K++ + Q +I+ A R H + TS +L+ ++ +E Sbjct: 76 LKKIKGIGEAKALQILAIIEIAKRM---DDHAEKIKITSVSDAFNYLK-FLSKETQEHMV 131 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 LYL++ N LIA E + G++N V PR+++ A+ N +I++HNHP+ + TPSQ D Sbjct: 132 ALYLNSSNHLIAQEVIAKGSLNVVRVLPRDILYYAIKHNCNGIIISHNHPNNDPTPSQED 191 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 T++L + + + DH+IVG + YSFA+ GL+ Sbjct: 192 IEFTKKLQTLANELGFDLLDHIIVGKKDFYSFAKAGLI 229 >UniRef50_A6Q5Q5 DNA repair protein RadC n=2 Tax=unclassified Epsilonproteobacteria RepID=A6Q5Q5_NITSB Length = 220 Score = 154 bits (390), Expect = 8e-37, Method: Composition-based stats. Identities = 50/158 (31%), Positives = 82/158 (51%), Gaps = 2/158 (1%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 +++L + E+ I A+ R+L + S + V E L+ + ++E F Sbjct: 65 IEKLLQIH-ELGIAKAAQIVSAVELSKRYLFKQHKTVISANDVYEELKEYF-DKKQEYFI 122 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 YLD N++ + GT+N++ VHPREV A+ A++I+AHNHPS TPS+ D Sbjct: 123 AFYLDGANRICEKRVITIGTLNQSLVHPREVFAPAIESRCASIIVAHNHPSNNLTPSRED 182 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +TQ+L Q +++ I + DH+I S E G+L Sbjct: 183 ILVTQKLKQSGKILGIELLDHIIFSKEGFVSLQEEGIL 220 >UniRef50_Q1RK76 DNA repair protein RadC n=11 Tax=Rickettsia RepID=Q1RK76_RICBR Length = 249 Score = 154 bits (390), Expect = 9e-37, Method: Composition-based stats. Identities = 51/159 (32%), Positives = 90/159 (56%), Gaps = 2/159 (1%) Query: 2 KQLSFLPGEMTPQDR--RLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEF 59 ++L + G +++ + + S ++ ++L+++M + E+F Sbjct: 91 ERLLSISGTNENLYINFAIVRELINRALKQKIINKNIIASWGSLIDYLKVNMGNMRLEQF 150 Query: 60 RVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQA 119 RVL+L+ +N LIA E L GTI++ V+PRE++KRAL A+ +IL HNHPSG PS+A Sbjct: 151 RVLFLNKKNILIADEVLSQGTIDQAAVYPREIIKRALFNEASNIILVHNHPSGSPDPSKA 210 Query: 120 DKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +T +V + + ++I V DH+I+ + +SF + LL Sbjct: 211 GIDMTNIIVDMCKTINIIVHDHVIISNNKYFSFKSNMLL 249 >UniRef50_C6E4Z0 DNA repair protein RadC n=3 Tax=Geobacter RepID=C6E4Z0_GEOSM Length = 167 Score = 154 bits (389), Expect = 1e-36, Method: Composition-based stats. Identities = 53/128 (41%), Positives = 81/128 (63%), Gaps = 2/128 (1%) Query: 31 HEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPRE 90 +P +TS V + + +E F L+LD +N+++ + + TG++N++ VHPRE Sbjct: 42 LKPNTRYTSASQVFDTF-TFLRHETKEHFIALHLDGKNRIVCIDMVSTGSLNQSIVHPRE 100 Query: 91 VVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIY 150 + K AL +AAAVIL HNHP+G+ TPS D T+T+RL + +L+ IRV DH+I+G Y Sbjct: 101 LFKTALLSSAAAVILLHNHPTGDPTPSTEDLTITRRLQEAGELIGIRVLDHIIIGDN-YY 159 Query: 151 SFAEHGLL 158 SF E G + Sbjct: 160 SFTERGNI 167 >UniRef50_C4V569 DNA repair protein RadC n=2 Tax=Selenomonas RepID=C4V569_9FIRM Length = 225 Score = 154 bits (389), Expect = 1e-36, Method: Composition-based stats. Identities = 56/158 (35%), Positives = 78/158 (49%), Gaps = 3/158 (1%) Query: 3 QLSFLPGEMTPQDRRLIQRALRALDRHLHEPG--VAFTSTHAVREWLRLHMAALEREEFR 60 + + +PG + + AL R V L A RE F Sbjct: 69 EFARIPG-IGSAKAATVLAALELGRRAYAGTRGMPRMNEAADVAALLSARCQAERREHFF 127 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 VL L +N+++ + TGT+ T VHPREV + A+ +AA +I+AHNHPSG+ PS D Sbjct: 128 VLPLSAKNEVLMIADVSTGTLTNTLVHPREVFEPAIRCSAAHIIIAHNHPSGDPAPSAED 187 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 LT+ L + L+ I V DH+IV +SFAE GLL Sbjct: 188 HRLTRSLHEAGALLGIPVADHVIVARDGFFSFAEAGLL 225 >UniRef50_Q6F7Z8 UPF0758 protein ACIAD3126 n=19 Tax=Proteobacteria RepID=Y3126_ACIAD Length = 271 Score = 153 bits (388), Expect = 1e-36, Method: Composition-based stats. Identities = 51/161 (31%), Positives = 87/161 (54%), Gaps = 3/161 (1%) Query: 1 MKQLSFLPGEMT---PQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALERE 57 +++LS G T + + R L+ + H+ + S+ V ++LR + ++E Sbjct: 82 LQELSHFHGIGTTKYAHLMAVKELGRRYLNHYFHQDALNLNSSRLVLDYLRYELLGEKQE 141 Query: 58 EFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPS 117 F VL LD++ + + + LF G++N + ++ AL +A +++AHNHP G+ PS Sbjct: 142 VFAVLCLDSELRKLNFKKLFYGSLNACNISINHTLRYALQQHACHIVIAHNHPFGKAEPS 201 Query: 118 QADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 AD LT +L Q QLV+I++ DH I+ +SFAE LL Sbjct: 202 AADLDLTHQLYQACQLVEIKLLDHFIIAKDGTFSFAERALL 242 >UniRef50_C3WLA1 DNA repair protein radC n=2 Tax=Fusobacterium RepID=C3WLA1_9FUSO Length = 242 Score = 153 bits (388), Expect = 1e-36, Method: Composition-based stats. Identities = 51/164 (31%), Positives = 89/164 (54%), Gaps = 7/164 (4%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDR------HLHEPGVAFTSTHAVREWLRLHMAAL 54 +K+L + G + P LI+ L + T A+ ++LR + Sbjct: 80 IKELEKIKG-IGPISAILIKFVGELLTELYGENLKIETKADKITDKEALLKFLRNKIGYE 138 Query: 55 EREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGET 114 + E+F V+YL + N++IA E +GT++R+ ++PRE+ KR + NA ++I+AHNHPSG T Sbjct: 139 DVEKFYVIYLSSSNEVIAFEESSSGTLDRSSIYPREIYKRVIMENAKSIIIAHNHPSGNT 198 Query: 115 TPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 PS+ D +T + + L+ + +H+I+ +SF E GL+ Sbjct: 199 CPSKCDIDITNEIAKGLKNFGALLLEHIIITRDSYFSFLEEGLI 242 >UniRef50_Q6AQC9 Related to DNA repair protein RadC n=4 Tax=Deltaproteobacteria RepID=Q6AQC9_DESPS Length = 249 Score = 153 bits (388), Expect = 1e-36, Method: Composition-based stats. Identities = 51/158 (32%), Positives = 85/158 (53%), Gaps = 2/158 (1%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 ++++ + G I + E S+ V E+L M L++E F Sbjct: 77 LQEVKGV-GPKNSFAISFIHAVAARYLQLRLEGKSYLHSSTEVVEYLSYRMRGLKKEVFC 135 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 V++LD+ + +I E + G++ VHPRE++ +AL +AAA+I++HNHPSG PS D Sbjct: 136 VVFLDSSHGIICSEIIAEGSLTVNTVHPRELLVKALEHHAAALIISHNHPSGALLPSPQD 195 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 LT+ L + + I++ DH+I+G SFA+HGL+ Sbjct: 196 IQLTRLLYFLCSSMQIQLLDHIIIGDGAY-SFADHGLM 232 >UniRef50_B3JIE2 Putative uncharacterized protein n=10 Tax=Bacteroidales RepID=B3JIE2_9BACE Length = 220 Score = 153 bits (388), Expect = 1e-36, Method: Composition-based stats. Identities = 52/157 (33%), Positives = 85/157 (54%), Gaps = 2/157 (1%) Query: 4 LSFLPGEMTPQDRRLIQRALRALDRHLHE--PGVAFTSTHAVREWLRLHMAALEREEFRV 61 LS + +TP +++ A+ R A S++ V + + + + EE V Sbjct: 61 LSDVLETLTPSRKKVAYAAIELYKRLKEGQVESPALLSSNNVYKMMHPVLCDIATEEMWV 120 Query: 62 LYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADK 121 L L++ ++LI + G IN V R ++K+AL++NA + I+ HNHPSG PS AD Sbjct: 121 LLLNSSSKLIRKVRISCGGINTAPVDIRVIMKQALYYNAVSFIMVHNHPSGARKPSSADD 180 Query: 122 TLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 LT+ + + + +DIR+ DH+IV G YS+A+ G L Sbjct: 181 RLTEAVKKAAETLDIRLVDHVIVAGNNYYSYADEGRL 217 >UniRef50_C3WF45 Putative uncharacterized protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WF45_FUSMR Length = 154 Score = 153 bits (387), Expect = 2e-36, Method: Composition-based stats. Identities = 53/149 (35%), Positives = 95/149 (63%), Gaps = 2/149 (1%) Query: 12 TPQDRRLIQRALRALDRHLHEPGV--AFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQ 69 Q+ ++ + + + + + + E+L+++++ EEF++L+L+N N+ Sbjct: 6 GTQEIEELKELIHYISKEGIKRRDLTTIKNKENLLEFLKINLSPRNNEEFKILFLNNANK 65 Query: 70 LIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQ 129 LIA +TLF GTI+++ V+PR V++ L +N+A VILAHNHPSG PS+ D LT+ L + Sbjct: 66 LIAEKTLFYGTIDKSAVYPRVVLEEVLRYNSAGVILAHNHPSGNLRPSKQDIQLTEALQE 125 Query: 130 VLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +L+ +++ V DH+I+G + +SF E GL+ Sbjct: 126 LLEKINVMVLDHMIIGDDEYFSFREEGLI 154 >UniRef50_B9QT39 DNA repair protein RadC n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QT39_9RHOB Length = 228 Score = 153 bits (387), Expect = 2e-36, Method: Composition-based stats. Identities = 51/150 (34%), Positives = 83/150 (55%) Query: 9 GEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQN 68 G + I++ + R V ++++ M LE E+FR L+L+ ++ Sbjct: 79 GPVLADTLSAIRQCIVRSARAEITERRVLDCWSEVIDYIQATMGYLEIEQFRCLFLNKKH 138 Query: 69 QLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLV 128 +IA E + GT++ T V+PRE+++RAL A+A+IL HNHPSG+ TPS+ D +T +LV Sbjct: 139 GVIADEVMQEGTVDHTPVYPRELMRRALILQASALILVHNHPSGDPTPSRPDIEMTAQLV 198 Query: 129 QVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 + + + I + DH+IV SF LL Sbjct: 199 DIAKPLGIEINDHIIVARGLAVSFKGMNLL 228 >UniRef50_Q6TFX1 ORF25 n=3 Tax=Enterobacteriaceae RepID=Q6TFX1_ERWAM Length = 149 Score = 153 bits (387), Expect = 2e-36, Method: Composition-based stats. Identities = 76/149 (51%), Positives = 99/149 (66%), Gaps = 1/149 (0%) Query: 10 EMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQ 69 + + ++ +I++A + + T A R LR +AA RE F +L+ N Sbjct: 2 KFSAEELNIIRQADAIIAGKITTT-DFITGADAARSLLRFRLAAEPRESFCAFFLNCHNG 60 Query: 70 LIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQ 129 +IA E LF GTI+ VHPR V++RALH NAAAV+LAHNHPS TTPSQADK +T+RL Q Sbjct: 61 VIAFEELFKGTISSVTVHPRIVLQRALHHNAAAVVLAHNHPSANTTPSQADKLITERLAQ 120 Query: 130 VLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 VL +VD++V DHLIVGG IYSFAEHGL+ Sbjct: 121 VLGMVDVKVLDHLIVGGSDIYSFAEHGLI 149 >UniRef50_C9LCX8 DNA repair protein RadC n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LCX8_9BACT Length = 228 Score = 152 bits (386), Expect = 3e-36, Method: Composition-based stats. Identities = 51/161 (31%), Positives = 77/161 (47%), Gaps = 4/161 (2%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEP---GVAFTSTHAVREWLRLHMAALERE 57 ++ L G + P I A R EP + + R + E Sbjct: 68 IQSLCRYAG-IGPAKAITILAACELGRRRAEEPAEQRPLMDGPQKIYSFFRQRLEDTPHE 126 Query: 58 EFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPS 117 EF ++L+ + QL++ + G + T V R + +AL A A+ + HNHPSG PS Sbjct: 127 EFHAMFLNRRLQLVSEALIGRGGLTETTVDVRLLFGKALEAKATALAICHNHPSGNPRPS 186 Query: 118 QADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 QAD LTQ++ Q +L+DIR+ DH+IV + YS+ E G L Sbjct: 187 QADDRLTQKVAQAARLLDIRLVDHIIVADKCYYSYQEEGKL 227 >UniRef50_Q03R16 DNA repair protein n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03R16_LACBA Length = 220 Score = 152 bits (385), Expect = 3e-36, Method: Composition-based stats. Identities = 53/160 (33%), Positives = 85/160 (53%), Gaps = 6/160 (3%) Query: 2 KQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTS---THAVREWLRLHMAALEREE 58 +Q +++ G + R+ + A+ P + + + L + L +E+ Sbjct: 50 QQRAYISGN---RQRQALLTAIELGRWAEKAPRPILGEVLASSQLGQVLMDDLRYLLQEQ 106 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 VL LD Q+++I +T+F GT+N VHPRE+ + A+ AA VI+AHNHPSG+ PS Sbjct: 107 LEVLALDAQHRIIERQTVFQGTLNSCPVHPREIFRVAVMSGAATVIVAHNHPSGQPQPST 166 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +D+ QRL QL+ I + D +VG +SF E G+L Sbjct: 167 SDRAFMQRLAACGQLMGIPLLDGFVVGLHSYFSFKEAGIL 206 >UniRef50_Q6MAB0 UPF0758 protein pc1765 n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Y1765_PARUW Length = 231 Score = 152 bits (385), Expect = 3e-36, Method: Composition-based stats. Identities = 46/160 (28%), Positives = 77/160 (48%), Gaps = 2/160 (1%) Query: 1 MKQLSFLPGE--MTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREE 58 + +L + G + R + + + ++ + RE Sbjct: 70 LTELLEVQGIGFAKAIQLKAALNLGFRATRQQIKSRYLIEHSSHAYQLVKDELENENREI 129 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 F ++ D + LI +E + G++++T VHPREV A+ AA++I+ HNHPSG+ PS Sbjct: 130 FMAIFQDTKGYLITYEVISIGSLSQTLVHPREVFYSAIRHKAASLIVVHNHPSGDPMPSN 189 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D LTQ L++ +L+ I + DHLI+G SF + LL Sbjct: 190 QDLKLTQILLEGSRLLGIPLRDHLIIGKNSYVSFKDQNLL 229 >UniRef50_Q5DY97 DNA repair protein RadC n=17 Tax=Proteobacteria RepID=Q5DY97_VIBF1 Length = 165 Score = 152 bits (385), Expect = 3e-36, Method: Composition-based stats. Identities = 58/148 (39%), Positives = 85/148 (57%), Gaps = 1/148 (0%) Query: 11 MTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQL 70 T ++ ++ A ++ + A TS E + ERE F +L LDNQ++L Sbjct: 19 FTENEKMILAEAASIIEVKIRNTS-ALTSPDLAAELCVNRLVHQEREVFAILMLDNQHRL 77 Query: 71 IAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQV 130 I G+I+ V+PREV+K LH+NAAAVI AHNHPSG PS AD+ +T RL Sbjct: 78 IKFVEHSVGSISSASVYPREVLKSVLHYNAAAVIFAHNHPSGVAEPSDADRRITARLSSA 137 Query: 131 LQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 L+L+D++V DH ++G + SFA+ G + Sbjct: 138 LELIDVKVLDHFVIGVGETVSFAKRGWI 165 >UniRef50_Q8VR59 Putative intergenic-region protein n=24 Tax=Escherichia RepID=Q8VR59_ECOLX Length = 260 Score = 152 bits (385), Expect = 3e-36, Method: Composition-based stats. Identities = 84/103 (81%), Positives = 95/103 (92%) Query: 56 REEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETT 115 R EFRVLYL+NQN+LIA ETLFTGTINRTEVHPREV+KRAL+ NAAAV+LAHNHPSGE T Sbjct: 158 RMEFRVLYLNNQNKLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVT 217 Query: 116 PSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 PS+AD+ +T+RLVQ L LVDIRVPDHLIVGG Q++SFAEHGLL Sbjct: 218 PSKADRLITERLVQALGLVDIRVPDHLIVGGSQVFSFAEHGLL 260 >UniRef50_B2URH1 DNA repair protein RadC n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2URH1_AKKM8 Length = 246 Score = 152 bits (385), Expect = 4e-36, Method: Composition-based stats. Identities = 46/158 (29%), Positives = 78/158 (49%), Gaps = 8/158 (5%) Query: 3 QLSFLPGEMTPQDRRLIQRALRALDRHLHE--PGVAFTSTHAVREWLRLHMAALEREEFR 60 +++ + + + A R L E + V ++L M E+E Sbjct: 70 EIANICKGIGMAKAATLSAAFELGARALRETLSRQPIQTPEDVYDYLTTAMRWKEKETVL 129 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 VL LD + +LI + +GT+N + HPR++++ + NA ILAHNHPSG PS+ D Sbjct: 130 VLLLDTKCRLIKPVEISSGTLNESIAHPRDILRPTVIHNAYGFILAHNHPSGNPAPSRTD 189 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGG------RQIYSF 152 LT+R+ + +L+ +R DH+I+G + YS+ Sbjct: 190 DLLTERVRECSKLLGVRFLDHVIIGKPTETTNKNYYSY 227 >UniRef50_Q3JV52 UPF0758 protein BURPS1710b_1139 n=75 Tax=Proteobacteria RepID=Y1139_BURP1 Length = 278 Score = 152 bits (384), Expect = 4e-36, Method: Composition-based stats. Identities = 63/157 (40%), Positives = 90/157 (57%), Gaps = 1/157 (0%) Query: 2 KQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRV 61 K L + T +++ A RAL S AV ++LRL + RE F Sbjct: 123 KGLRGIGPARTAILVAVVELARRALAEK-ARERPLVDSPGAVDDYLRLLIGTRPREVFVC 181 Query: 62 LYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADK 121 L+LD +++L+ E G++ R V+PRE+V+RAL NAAA+I+AHNHPSG PS AD+ Sbjct: 182 LFLDARHRLVQTEETAHGSLTRMAVYPREIVRRALALNAAALIVAHNHPSGAVRPSAADR 241 Query: 122 TLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 LT+ L L LVDI++ DH +VG +SFA+ G + Sbjct: 242 RLTRVLRDALALVDIKLIDHFVVGASDTFSFAQAGWI 278 >UniRef50_Q5WTW4 UPF0758 protein lpl2409 n=6 Tax=Legionella RepID=Y2409_LEGPL Length = 227 Score = 151 bits (382), Expect = 8e-36, Method: Composition-based stats. Identities = 58/160 (36%), Positives = 93/160 (58%), Gaps = 3/160 (1%) Query: 1 MKQLSFLPG--EMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREE 58 ++ + G E+ + + D + + ++T +L+ + + E Sbjct: 65 LQSFKSIHGLGEVRYAQLQAAKEICHRSDFIDLQKEIRLSNTQQTYAFLKKRLRDYKNET 124 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 F L+LDNQ+++IA+E LF+GTIN V+PR +V+R L NAAA+ILAHNHPSG + SQ Sbjct: 125 FAALFLDNQHRIIAYEELFSGTINTATVYPRPIVERVLQLNAAALILAHNHPSGLSDASQ 184 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYS-FAEHGL 157 D +T+R+ L LVD R+ DH+++G ++YS FAE+ Sbjct: 185 QDLAITERIRDALDLVDARLLDHIVIGDNEVYSIFAENKW 224 >UniRef50_O67541 UPF0758 protein aq_1610 n=2 Tax=Aquificaceae RepID=Y1610_AQUAE Length = 231 Score = 151 bits (382), Expect = 8e-36, Method: Composition-based stats. Identities = 43/159 (27%), Positives = 80/159 (50%), Gaps = 3/159 (1%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLH-EPGVAFTSTHAVREWLRLHMAALEREEF 59 +++L + G + ++ + R + ++ + E+L+ RE Sbjct: 75 VEELLKVRG-LGLVKALQVKALVELSKRFKGGKSRISIRNPQEAFEFLKDKF-DERRESL 132 Query: 60 RVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQA 119 LYLD N+L+ E + G +N P++++ +A+ +A +I+AHNHP GE +PS Sbjct: 133 IALYLDLSNRLLDWEVVAIGNVNTVFSKPKDILFKAVKLSANGIIIAHNHPQGEPSPSNE 192 Query: 120 DKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D T+RL + +L+ + DHLI+ + +SF E G+L Sbjct: 193 DLNFTERLKKACELLGFELLDHLILSEGRYFSFREEGVL 231 >UniRef50_D1AWS8 DNA repair protein RadC n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AWS8_STRM9 Length = 211 Score = 151 bits (381), Expect = 1e-35, Method: Composition-based stats. Identities = 49/126 (38%), Positives = 82/126 (65%) Query: 33 PGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVV 92 + + ++L+ +ERE F+VLY + +N LI E +F GTI+++ V+ RE+V Sbjct: 86 EEKKISCFEDLVKYLKFQYVDMEREVFKVLYFNTKNVLIKDENIFYGTIDKSVVYVREIV 145 Query: 93 KRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSF 152 K L +NA ++I+ HNHPSG PS D+ LT++++ VL+L+D+R+ DH+I+ + YSF Sbjct: 146 KNILKYNAKSIIIVHNHPSGNLEPSNDDRCLTKKIIDVLKLIDVRLSDHIIISNKGYYSF 205 Query: 153 AEHGLL 158 E+G + Sbjct: 206 LENGQI 211 >UniRef50_C8PDJ9 DNA repair protein RadC n=1 Tax=Lactobacillus iners DSM 13335 RepID=C8PDJ9_9LACO Length = 205 Score = 151 bits (381), Expect = 1e-35, Method: Composition-based stats. Identities = 46/139 (33%), Positives = 78/139 (56%) Query: 20 QRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTG 79 + L + E +F S+ + +L ++ +E +Y+D +N++IA + +F G Sbjct: 67 ELLLNRVKAIKREKMESFCSSSQIGYYLSNVLSGCYQEHLMAVYVDVKNKIIAEKVIFKG 126 Query: 80 TINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVP 139 T+N+ +HPR++ + A+ +NAA LAHNHPS + TPS+ D +T+++ V + + IR Sbjct: 127 TLNQAIIHPRDIFRWAIIYNAAGFFLAHNHPSEDLTPSEQDIQVTKKISSVSECMGIRFL 186 Query: 140 DHLIVGGRQIYSFAEHGLL 158 DH IV SF E LL Sbjct: 187 DHFIVNTGNYLSFKEMELL 205 >UniRef50_C4SWK5 DNA repair protein n=1 Tax=Yersinia intermedia ATCC 29909 RepID=C4SWK5_YERIN Length = 152 Score = 150 bits (380), Expect = 1e-35, Method: Composition-based stats. Identities = 70/141 (49%), Positives = 98/141 (69%) Query: 18 LIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLF 77 LI + +++ + + G ST AVRE+L+ +A LE E F VL LDNQ++++A+E LF Sbjct: 12 LILQQAQSIIENRYIRGDKMFSTEAVREYLKFKLAPLEHEVFSVLLLDNQHRILAYEELF 71 Query: 78 TGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIR 137 GT+N ++PRE+VK +L +NA A+IL HNHPSGE PS ADK +T +L VL L+D++ Sbjct: 72 RGTLNAVSIYPREIVKLSLRYNAGAIILVHNHPSGEPEPSHADKEITNKLKSVLGLLDVQ 131 Query: 138 VPDHLIVGGRQIYSFAEHGLL 158 V DHLIV G Q+ S AE GL+ Sbjct: 132 VLDHLIVAGTQVVSLAERGLV 152 >UniRef50_Q02HM7 Putative uncharacterized protein n=1 Tax=Pseudomonas aeruginosa UCBPP-PA14 RepID=Q02HM7_PSEAB Length = 202 Score = 150 bits (380), Expect = 1e-35, Method: Composition-based stats. Identities = 59/144 (40%), Positives = 84/144 (58%), Gaps = 5/144 (3%) Query: 15 DRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHE 74 + +L+QRA+ L+R + G S +R++LRL + E F ++LD Q Sbjct: 64 EDQLVQRAIAVLERRMFRRGQELLSPRGLRQYLRLRLVGKSEEVFAAVFLDAQ-----WR 118 Query: 75 TLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLV 134 LF GT+N ++ R VVKRAL NA V++AHNHPSG TPSQAD T++L L LV Sbjct: 119 ALFRGTVNAAPMYARVVVKRALRHNAVGVVVAHNHPSGLATPSQADIAATRQLKAALNLV 178 Query: 135 DIRVPDHLIVGGRQIYSFAEHGLL 158 DI + DH ++G + +SF + LL Sbjct: 179 DIELLDHFVIGRGEPFSFFDAQLL 202 >UniRef50_D1N9M0 DNA repair protein RadC n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N9M0_9BACT Length = 227 Score = 150 bits (380), Expect = 1e-35, Method: Composition-based stats. Identities = 53/150 (35%), Positives = 81/150 (54%), Gaps = 1/150 (0%) Query: 9 GEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQN 68 GE L ++ +T + +LR+ + ++E F VL+L+ QN Sbjct: 79 GEAAVTLLALHKQLCTKYLEQKARDVDVLDNTTKIVNFLRMKLGGGKKETFMVLFLNAQN 138 Query: 69 QLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLV 128 L+ + + GT++R V+ REV+++A++ A AVILAHNHP+G PS AD LT + Sbjct: 139 HLLCFDVI-PGTVDRATVYAREVLEKAINTKATAVILAHNHPTGICEPSPADIKLTNTIR 197 Query: 129 QVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 QVLQ V I + DH+IV +SFA +L Sbjct: 198 QVLQPVGILLHDHIIVAPSCYFSFASRRML 227 >UniRef50_A5VEU8 DNA repair protein RadC n=4 Tax=Sphingomonadales RepID=A5VEU8_SPHWW Length = 230 Score = 150 bits (380), Expect = 1e-35, Method: Composition-based stats. Identities = 47/149 (31%), Positives = 83/149 (55%) Query: 10 EMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQ 69 E ++ + + L R + + A+ ++LR MA E RVL+L+++N Sbjct: 82 EGVVAALKIAEASALRLLRSKVQDRPILSDWQALADYLRADMAHRAVERVRVLHLNSKNV 141 Query: 70 LIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQ 129 L+ E + G++++ V+ RE+++RAL +AA+I+ HNHPSG+ PS+ D LT+ L+ Sbjct: 142 LVRDELVSEGSVDQAAVYVREIIRRALELGSAALIIVHNHPSGDPQPSRQDVELTRELIA 201 Query: 130 VLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 + + I + DH++VG R S GL+ Sbjct: 202 AAKPLGIAIHDHVVVGTRGQASLRALGLI 230 >UniRef50_C5TNC6 DNA repair protein RadC n=3 Tax=Neisseria RepID=C5TNC6_NEIFL Length = 224 Score = 150 bits (380), Expect = 1e-35, Method: Composition-based stats. Identities = 53/150 (35%), Positives = 80/150 (53%) Query: 9 GEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQN 68 G + +++ R + + + ++ +V ++LRLH+ + E L L+ QN Sbjct: 75 GLASYTQFAVVKEIGRRILGEDLQEQIILSNPKSVADYLRLHLGHEKIEVSVALLLNRQN 134 Query: 69 QLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLV 128 QLIA L GT+ V+ RE+VK AL A ++ILAHNHP PS++D T+RL Sbjct: 135 QLIAVRELSRGTVAENTVYIREIVKLALDEYADSLILAHNHPGSSARPSESDVQFTERLK 194 Query: 129 QVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 Q L LVDI + DH IV ++ S E G + Sbjct: 195 QALSLVDITLLDHFIVTAKETCSLREQGYM 224 >UniRef50_C7TC16 DNA repair protein n=8 Tax=Lactobacillus RepID=C7TC16_LACRG Length = 222 Score = 150 bits (379), Expect = 2e-35, Method: Composition-based stats. Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 1/153 (0%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 + + L ++ R + R G ++ + + + A +E Sbjct: 64 LDHIRGLGAAKRASILAGVELGRRVMRRQSVRYG-QIKNSEQLGKTMVSRFAGANQESML 122 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 +L+LD +NQ+I + + GT++ PR V + AL +A +I+ HNHPSG+ +PSQAD Sbjct: 123 ILFLDVKNQIITEQIVAIGTVDSALADPRVVFREALKLSATNLIMVHNHPSGDPSPSQAD 182 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFA 153 + T R L+ + + DHLI+G + YSFA Sbjct: 183 RDTTTRFQLAAALLGMHLLDHLIIGRQSYYSFA 215 >UniRef50_Q7MVX9 UPF0758 protein PG_0894 n=24 Tax=Bacteroidales RepID=Y894_PORGI Length = 227 Score = 149 bits (378), Expect = 2e-35, Method: Composition-based stats. Identities = 50/162 (30%), Positives = 82/162 (50%), Gaps = 4/162 (2%) Query: 1 MKQLSFLPGEMTPQDRRLIQRAL---RALDRHLHEPGVAFTSTHAVREWLRLHMAALERE 57 +++L+ M P + A+ R + + T + + + L +E Sbjct: 66 IQELTGSFRGMGPAKAVTVMAAMELSRRIPSQEMPRRESITDSRMAYRTISPFLTDLPQE 125 Query: 58 EFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPS 117 E VL L+ ++I+ E L G ++ T R ++ +A+ A+A+ILAHNHPSG PS Sbjct: 126 EMWVLLLNQSGKIISMENLSRGGVSETSADVRLIMHKAVSHLASAIILAHNHPSGTVRPS 185 Query: 118 QADKTLTQRLVQVLQLVDIRVPDHLIVGGRQ-IYSFAEHGLL 158 + D LTQR+ + L+ R+ DHLI+G +SFA+ GLL Sbjct: 186 EQDIQLTQRVQKAATLLGFRLNDHLIIGDDGAYFSFADEGLL 227 >UniRef50_B4RM65 UPF0758 protein NGK_1225 n=25 Tax=Neisseriaceae RepID=Y1225_NEIG2 Length = 225 Score = 149 bits (378), Expect = 2e-35, Method: Composition-based stats. Identities = 54/157 (34%), Positives = 81/157 (51%), Gaps = 2/157 (1%) Query: 4 LSFLPGEMTP--QDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRV 61 LS G T +++ R + + + + V ++LR H+ + E Sbjct: 68 LSAYKGMGTASFTQFAVVREIGRRILEEELQEEITLSDPDTVADYLRFHLGQEKVEVSVA 127 Query: 62 LYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADK 121 L L+ QNQLIA L GT+ ++ RE+VK AL A ++I+AHNHP G PSQ D Sbjct: 128 LLLNRQNQLIAVRELSRGTVAENTIYIREIVKLALDEYADSLIIAHNHPGGSPEPSQEDI 187 Query: 122 TLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 T+RL Q + LVD+ + DH IV + + SF + GL+ Sbjct: 188 MFTRRLAQAMSLVDVSLLDHFIVTSQTVRSFRQLGLM 224 >UniRef50_B6AT60 DNA repair protein RadC n=1 Tax=Rhodobacterales bacterium HTCC2083 RepID=B6AT60_9RHOB Length = 253 Score = 149 bits (378), Expect = 2e-35, Method: Composition-based stats. Identities = 63/155 (40%), Positives = 89/155 (57%) Query: 4 LSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLY 63 L L G QD +L+ A + + + +S AV + R +A E EEF VL+ Sbjct: 99 LEALIGVSATQDLKLVFGASKRMAKARIAHRPLISSWDAVLTYCRTSLAHKETEEFHVLF 158 Query: 64 LDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTL 123 L+ +N LIA ETL GT++ V+PREV+KRAL N+ A+IL HNHPSG+ +PS +D + Sbjct: 159 LNRRNMLIADETLGVGTVDHVPVYPREVLKRALELNSCAIILVHNHPSGDPSPSSSDIEM 218 Query: 124 TQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 T+ + Q + I + DHLI+G SF GLL Sbjct: 219 TKLIKQAADSLSITLHDHLIIGATGETSFVSEGLL 253 >UniRef50_C8NZ93 DNA repair protein RadC n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8NZ93_ERYRH Length = 235 Score = 149 bits (378), Expect = 2e-35, Method: Composition-based stats. Identities = 52/154 (33%), Positives = 80/154 (51%), Gaps = 2/154 (1%) Query: 2 KQLSFLPGEMTP--QDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEF 59 QLS + G + LR + + +S + WL L + E+E F Sbjct: 73 SQLSKIKGMKQAKCTTLLAVHELLRRIVMPFPGEKIKLSSCDRIVRWLNLEIGFEEQELF 132 Query: 60 RVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQA 119 RVL+L QN LI + LF GT +++ VHPR+V + A+ NA+ ++L HNHP G + S+A Sbjct: 133 RVLFLSTQNNLIRYLDLFKGTADKSLVHPRDVFREAVRCNASRIVLVHNHPGGSLSASEA 192 Query: 120 DKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFA 153 D +T+ L++V ++ I V DH+IV S Sbjct: 193 DVEVTRALIEVGMMIGIEVVDHIIVTSTNSVSLR 226 >UniRef50_UPI0001BC61BD DNA repair protein radC n=3 Tax=Fusobacterium RepID=UPI0001BC61BD Length = 227 Score = 149 bits (377), Expect = 2e-35, Method: Composition-based stats. Identities = 54/161 (33%), Positives = 89/161 (55%), Gaps = 4/161 (2%) Query: 2 KQLSFLPG--EMTPQDRRLIQRALRALDRHLHEPGVAFT--STHAVREWLRLHMAALERE 57 ++L + G E T + + L R+ + + ++R + RE Sbjct: 67 EELQSIKGIKENTSILLHFVGDLQKELFRNSLQEEKNIHIQRKEDLISYVRAQIGFENRE 126 Query: 58 EFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPS 117 +F VL+L+ NQL+ E LF G+I+R+ V+PRE++++ L + A +VI AHNHPSG T PS Sbjct: 127 KFFVLFLNTANQLLCSEELFQGSIDRSAVYPREILEKVLKYKAKSVIFAHNHPSGNTQPS 186 Query: 118 QADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 + D LT+ + L++ D+ + +H+IV +SF E GLL Sbjct: 187 RQDIALTKEMKDALRMFDVLLIEHIIVSKHSYFSFLEEGLL 227 >UniRef50_A7V531 Putative uncharacterized protein n=1 Tax=Bacteroides uniformis ATCC 8492 RepID=A7V531_BACUN Length = 196 Score = 149 bits (377), Expect = 3e-35, Method: Composition-based stats. Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 2/157 (1%) Query: 4 LSFLPGEMTPQDRRLIQRALRALDRHLHE--PGVAFTSTHAVREWLRLHMAALEREEFRV 61 L L +TP RR+ A+ R L + + V E + + L EEF V Sbjct: 40 LEKLFSSLTPGRRRVAVAAVEMYKRQLSQQVERRQIRMSKDVYELMEPLIGDLPNEEFWV 99 Query: 62 LYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADK 121 + ++ ++I + G I++T R +++ + A HNHPSG + PS DK Sbjct: 100 VSINQAGRIIKKVRISVGGIDQTSADIRLIMRVLIDTGAVQFAAVHNHPSGNSRPSNEDK 159 Query: 122 TLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 LT++L + L +IR+ DH+I+ YSF + GL+ Sbjct: 160 RLTEQLKKAAGLFNIRMIDHVIITNGGYYSFGDEGLI 196 >UniRef50_B5YDI9 DNA repair protein n=2 Tax=Dictyoglomus RepID=B5YDI9_DICT6 Length = 228 Score = 149 bits (376), Expect = 4e-35, Method: Composition-based stats. Identities = 46/159 (28%), Positives = 77/159 (48%), Gaps = 3/159 (1%) Query: 3 QLSFLPGE---MTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEF 59 +L PG Q + I+ R G + ++ + + M L+ E Sbjct: 70 ELIKYPGIGVTKAIQIKASIELGRRIFSEKKSYFGESISNPYDAFLIFKEDMFDLKEEHL 129 Query: 60 RVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQA 119 +Y+D +N+ ++ + G +N PR++ K AL N+A +ILAHNHPSG+ TPS+ Sbjct: 130 FCIYMDIKNKCLSKRLIAKGDLNIVYASPRDIFKYALQENSAKIILAHNHPSGDLTPSED 189 Query: 120 DKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D T+RL++ +++ I V DHLI+ S E + Sbjct: 190 DVIFTKRLIEAGKILGIEVLDHLIIHNEDYLSLKEKNFI 228 >UniRef50_Q9LAI3 RadC (Fragment) n=2 Tax=Firmicutes RepID=Q9LAI3_BACSQ Length = 119 Score = 148 bits (375), Expect = 4e-35, Method: Composition-based stats. Identities = 43/119 (36%), Positives = 73/119 (61%) Query: 40 THAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFN 99 ++ + ++R+ F V+ LD +NQ A G++N + VHPREV+K A+ N Sbjct: 1 PEDAYNLVKCFLVDVDRDYFLVICLDTKNQPTAINICHVGSLNASLVHPREVMKPAILSN 60 Query: 100 AAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +A+VI+AHNHPS + TPS+ D +T+RL++ +++ I + DH++VGG + S E + Sbjct: 61 SASVIVAHNHPSLDPTPSKEDINVTKRLIEAGRIMGIDILDHIVVGGNKYVSLKEKRYI 119 >UniRef50_B8FHA4 DNA repair protein RadC n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FHA4_DESAA Length = 265 Score = 148 bits (375), Expect = 4e-35, Method: Composition-based stats. Identities = 56/163 (34%), Positives = 88/163 (53%), Gaps = 10/163 (6%) Query: 4 LSFLPGEMTPQDRRLIQRALRALDRHLHEPG-------VAFTSTHAVREWLRLHMAALER 56 L + G ++ +RA+ + E A +S+ + L + Sbjct: 90 LQKVKGLGPANILGIL--LMRAVAKKHLESEAVLASLQEAVSSSEELYNLLNFQFENKKN 147 Query: 57 EEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTP 116 E F ++YLD QN+++ ET F G++N + V+ RE++ +AL A+AV+LAHNHPSG T P Sbjct: 148 ECFFIVYLDVQNRILNMETPFEGSLNASHVYTRELIDKALKTGASAVLLAHNHPSGNTKP 207 Query: 117 SQADKTLTQRLVQVLQLVDIRVPDHLIVGG-RQIYSFAEHGLL 158 S+ D LT L + V+I + +HLI+G + YSFA+HG L Sbjct: 208 SKNDIQLTYTLFTAFRSVEIHLLEHLIIGKQGEYYSFADHGYL 250 >UniRef50_A0L491 DNA repair protein RadC n=4 Tax=Bacteria RepID=A0L491_MAGSM Length = 241 Score = 148 bits (374), Expect = 6e-35, Method: Composition-based stats. Identities = 56/151 (37%), Positives = 77/151 (50%), Gaps = 1/151 (0%) Query: 9 GEMTPQDRRLIQRALRALDRHLH-EPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQ 67 GE ++ R VR++L MA E F VL LD Q Sbjct: 85 GETAALFITMLPALTRRYQHDAATRNKTPLNRADNVRDYLVPLMAGRTEEVFYVLCLDAQ 144 Query: 68 NQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRL 127 +L+ + GTI + VHPR+VV+ + AA VILAHNHPSG SQ D LT L Sbjct: 145 CRLLFPALVTEGTIRQAHVHPRQVVELVIRHKAAHVILAHNHPSGNPKASQDDILLTSHL 204 Query: 128 VQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +Q L +D++V DHLI+ G +++SFA G++ Sbjct: 205 MQALNPIDVQVLDHLIIAGEKVFSFASAGMM 235 >UniRef50_UPI000196B4AA hypothetical protein CATMIT_00107 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B4AA Length = 226 Score = 148 bits (374), Expect = 6e-35, Method: Composition-based stats. Identities = 53/154 (34%), Positives = 81/154 (52%), Gaps = 3/154 (1%) Query: 4 LSFLPGEMTPQDRRLIQRALRALDRHLHEPG--VAFTSTHAVREWLRLHMAALEREEFRV 61 L G I AL R + + V L M+ L +E F + Sbjct: 67 LLSFKGINKA-KAIGIMAALEFSKRINIHTNINEVYDNPTKVFYHLETKMSHLSQEHFLI 125 Query: 62 LYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADK 121 + LDN N+LIA +TLF G++N + V RE+ + AL FN ++I HNHPSG+ PS D Sbjct: 126 MILDNHNRLIAEKTLFIGSVNMSIVSAREIFREALAFNGVSIICVHNHPSGDAHPSSEDI 185 Query: 122 TLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEH 155 ++TQ+LV + +++++ + DH+I+G Q YSF Sbjct: 186 SMTQKLVDLGKMMNVDIVDHIIIGRNQYYSFKAE 219 >UniRef50_A8ZUS2 DNA repair protein RadC n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZUS2_DESOH Length = 253 Score = 148 bits (374), Expect = 6e-35, Method: Composition-based stats. Identities = 53/160 (33%), Positives = 89/160 (55%), Gaps = 4/160 (2%) Query: 2 KQLSFLPGEMTPQDR---RLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREE 58 + L + G + P++ RL++ ++ + +L + RE Sbjct: 70 EALCRIDG-IGPKNLFGIRLVKAVADRCLEKELVGRPLLANSTDLLNYLNHTLRDRHRET 128 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 F +++D +N++I ETL G++ + V+PREVV RAL +AAA+I HNHPSGE PS+ Sbjct: 129 FAAIFMDAKNRVIVVETLSEGSLTESPVYPREVVARALAHHAAALICCHNHPSGEPEPSR 188 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D +T++LV + + I V +H+IVG R +SFA++G + Sbjct: 189 QDIAITRKLVMACKTMGITVHEHIIVGERGHFSFADNGYM 228 >UniRef50_A2RLC4 UPF0758 protein llmg_1515 n=4 Tax=Lactococcus lactis RepID=Y1515_LACLM Length = 227 Score = 147 bits (373), Expect = 7e-35, Method: Composition-based stats. Identities = 48/155 (30%), Positives = 75/155 (48%), Gaps = 1/155 (0%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 +K++S + G+ + R + + + + S+ L M E+E Sbjct: 69 LKEISGI-GQTKAIELRAMIELGKRIQTTTRKRYGQVLSSKEYGMSLAFEMQNFEQEHLT 127 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 YLD QNQ+I +T+F G N PRE++ A+ + +++AHNHPSG PSQAD Sbjct: 128 ATYLDGQNQIIEKKTIFIGAFNHATASPREILYHAVKNLSVGLLVAHNHPSGNLQPSQAD 187 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEH 155 K T+++ + I DH+IVG YSF E Sbjct: 188 KIFTKKIKNACDNIGINFIDHIIVGAGNYYSFRER 222 >UniRef50_B0MF12 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=B0MF12_9FIRM Length = 282 Score = 147 bits (373), Expect = 7e-35, Method: Composition-based stats. Identities = 47/136 (34%), Positives = 72/136 (52%) Query: 23 LRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTIN 82 +R +D + + + L +++RE F VL L Q+I GT+N Sbjct: 4 IRLVDDPPIYSEDKIQNPNDAVQLLLKEFDSVDRELFFVLNLKTNGQVINVNIASMGTLN 63 Query: 83 RTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHL 142 + PRE+ K ++ NAA+VIL HNHPSG+ TPS+ D +T+RLV +L+ I V DH+ Sbjct: 64 SCILSPREIFKASILSNAASVILMHNHPSGDCTPSKQDVLMTKRLVACGELIGITVLDHV 123 Query: 143 IVGGRQIYSFAEHGLL 158 I+G S E ++ Sbjct: 124 ILGKETYLSMKEANMM 139 >UniRef50_A4W1K3 UPF0758 protein SSU98_1084 n=76 Tax=Streptococcus RepID=Y1084_STRS2 Length = 246 Score = 147 bits (373), Expect = 8e-35, Method: Composition-based stats. Identities = 42/155 (27%), Positives = 82/155 (52%), Gaps = 1/155 (0%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 ++ L+ + G + + + + + +++ + + + + ++E Sbjct: 69 LQSLTGI-GRVKAIEIKAMIELGKRINQSELLLNERILGSEKLGRKMIHEIGHKKQEHLV 127 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 LYL+ QNQ+I+ +T+F G++NR+ PRE++ A+ A ++I+ HNHPSG PS+ D Sbjct: 128 ALYLNTQNQIISQKTIFIGSVNRSIAEPREILHYAVKCMATSIIIVHNHPSGSVQPSRND 187 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEH 155 T+ L + + + + + DHLIVG + YSF E Sbjct: 188 LLFTENLKESCEKLGLVLLDHLIVGNKDYYSFREE 222 >UniRef50_C5NXB5 DNA repair protein RadC homolog n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXB5_9BACL Length = 257 Score = 147 bits (373), Expect = 8e-35, Method: Composition-based stats. Identities = 45/157 (28%), Positives = 83/157 (52%), Gaps = 5/157 (3%) Query: 1 MKQLS---FLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALERE 57 + +L + E I+ A R ++ + V S ++ +L+ + L +E Sbjct: 68 LTELMKHKGIGQEKAIHILANIEFARRIYATNVLD--VKCDSPQSIANYLKSSLENLTQE 125 Query: 58 EFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPS 117 F VL +D + ++I +F G+++ + VHPREV K A+ +A++++ HNHPSG+ TPS Sbjct: 126 VFVVLDIDTKGKIIEKREVFKGSLSMSVVHPREVFKLAIKNSASSIVCVHNHPSGDATPS 185 Query: 118 QADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAE 154 D T L++V ++V I + DH++V + S + Sbjct: 186 IEDIKTTINLMEVGEIVGIEMLDHIVVAKKGYVSIRK 222 >UniRef50_C3DWR5 DNA repair protein RadC n=1 Tax=Bacillus thuringiensis serovar sotto str. T04001 RepID=C3DWR5_BACTS Length = 154 Score = 147 bits (373), Expect = 9e-35, Method: Composition-based stats. Identities = 48/153 (31%), Positives = 77/153 (50%), Gaps = 1/153 (0%) Query: 7 LPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDN 66 + G + + +R + + P T E + +RE F V+ L+ Sbjct: 1 MKGAVKAMETTYEIVKIRQVREEVDIPRKKITGPDTAAEIATYFIGDDDREIFLVMCLNT 60 Query: 67 QNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQR 126 QN+++A G++N + VHPR+V K A+ N+ ++++AH HPSG PS ADK +++R Sbjct: 61 QNEVVAVHRCHVGSLNSSVVHPRDVFKSAILNNSFSIVVAHQHPSGMVLPSDADKDVSKR 120 Query: 127 LVQVLQLVDIRVPDHLIVGG-RQIYSFAEHGLL 158 L +L+ I V D LIV + YS E G L Sbjct: 121 LYDAGKLIGIEVLDSLIVNDAGRFYSLREKGYL 153 >UniRef50_C6VI64 DNA repair protein n=3 Tax=Lactobacillus plantarum RepID=C6VI64_LACPJ Length = 211 Score = 147 bits (372), Expect = 9e-35, Method: Composition-based stats. Identities = 47/119 (39%), Positives = 72/119 (60%) Query: 40 THAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFN 99 + + L A LE+E+ ++L LD +NQ+I + +F GT+N PRE++K AL Sbjct: 87 SEQLGAVLARDFANLEQEQLQLLCLDTKNQVIKRQVVFQGTLNSCPAQPREIIKVALTTP 146 Query: 100 AAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 A V++AHNHPSG+ TPS+ D T+RL +L+ + + D I+G +SFAE G+L Sbjct: 147 TARVVIAHNHPSGDVTPSKKDVEFTKRLQLACELMGLPLLDSFIIGVNDYFSFAEQGVL 205 >UniRef50_Q4QPE3 Putative DNA repair radC-like protein n=5 Tax=Haemophilus influenzae RepID=Q4QPE3_HAEI8 Length = 156 Score = 147 bits (372), Expect = 9e-35, Method: Composition-based stats. Identities = 51/150 (34%), Positives = 90/150 (60%), Gaps = 5/150 (3%) Query: 14 QDRRLIQRALRAL-----DRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQN 68 Q + ++++A L ++ ++ FT + + + + ERE F VL+LD + Sbjct: 7 QQQAILEQAQVILTKVMEEKPFYQGAQEFTEPSIAKLYFQTIIGNEERENFVVLFLDRIH 66 Query: 69 QLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLV 128 +LI E +F G+++ T V RE++++AL NA+A+I+ HNHP+G PS ADK +T+RL Sbjct: 67 RLIKSEVMFQGSVSETSVSIREIIRQALKLNASAIIIGHNHPTGNVEPSDADKYITKRLK 126 Query: 129 QVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 + +L+DI++ DH IV G + F ++ L+ Sbjct: 127 EACELMDIKLLDHFIVSGSASFCFTDNHLI 156 >UniRef50_B4RG10 DNA repair protein RadC n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RG10_PHEZH Length = 256 Score = 147 bits (372), Expect = 1e-34, Method: Composition-based stats. Identities = 52/155 (33%), Positives = 76/155 (49%) Query: 4 LSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLY 63 L G RL++ A R + ++LR + RE FRV++ Sbjct: 101 LERQIGAEACLQLRLVREASIRTTRGAVISRRFDANAKRTHDYLRALLEFETRESFRVIF 160 Query: 64 LDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTL 123 LD + E L GT++ V+ REV++ AL +AAA++L HNHPSG+ TPS AD + Sbjct: 161 LDASGAWSSDEELGRGTVDHAPVYVREVMREALRRDAAALVLVHNHPSGDPTPSAADVQV 220 Query: 124 TQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 T + + + V DHL+VG + SF GLL Sbjct: 221 TSEIAAAASALGMSVKDHLVVGSHGVASFQALGLL 255 >UniRef50_A6GHT1 DNA repair protein RadC n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GHT1_9DELT Length = 260 Score = 147 bits (371), Expect = 1e-34, Method: Composition-based stats. Identities = 48/158 (30%), Positives = 77/158 (48%), Gaps = 1/158 (0%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 ++++ + G+ R LDR +LR + ERE F Sbjct: 88 LREVIGI-GDAGATALAAAVELHRRLDRLDLPMRRPLRHPREAERFLRSLLGDAEREHFM 146 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 ++ LD + +++ T+ G++ R EVHPREV + + A +L HNHPSG+ PS+AD Sbjct: 147 IIGLDARQRVLLVRTIAVGSLTRVEVHPREVFRPLVRAGAHTCLLVHNHPSGDARPSEAD 206 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 LT R+ + + + I V DH++V S AE GL+ Sbjct: 207 IELTARMTDIGRFLGIPVLDHVVVSANGFVSLAELGLV 244 >UniRef50_Q2FT43 UPF0758 protein Mhun_2739 n=5 Tax=Archaea RepID=Y2739_METHJ Length = 225 Score = 147 bits (371), Expect = 1e-34, Method: Composition-based stats. Identities = 44/159 (27%), Positives = 76/159 (47%), Gaps = 5/159 (3%) Query: 4 LSFLPGEMTPQDRRLIQRALRALDRH---LHEPGVAFTSTHAVREWLR-LHMAALEREEF 59 L + G + P ++ +R+ + + T + + ++ +E F Sbjct: 68 LLRING-IGPTKAAVLMACFELANRYGTPAEKERIRITEPDHILKISEVTDLSGKSQEHF 126 Query: 60 RVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQA 119 V L+ +++I T+ G +N + VHPREV A+ AAA+I HNHPSG PS Sbjct: 127 LVTTLNGASEVICTRTITMGLLNHSLVHPREVFADAITDRAAAIICIHNHPSGNPEPSSE 186 Query: 120 DKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D T+T++L + +++ I + DHLI ++ S G L Sbjct: 187 DITVTRQLSEAGKILGISLLDHLIYTKGKVTSLRSLGYL 225 >UniRef50_B5Y6A0 UPF0758 protein COPRO5265_1522 n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=Y1522_COPPD Length = 235 Score = 147 bits (371), Expect = 1e-34, Method: Composition-based stats. Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 6/164 (3%) Query: 1 MKQLSFLPG--EMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREW----LRLHMAAL 54 +++L + G + + + ++ T+ E+ + Sbjct: 72 VEELLQIKGMGKAKAAQVKAALEIGKRFLQNETVEEARITTPEDAIEYAARYFSSMLMNE 131 Query: 55 EREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGET 114 +E F +L LD +N+ I H + G+ +T V P+E++K+ +A A+IL HNHPSG+ Sbjct: 132 GKEHFWILLLDRKNRPIKHVEISVGSSIQTTVDPKEILKQVSLTSAQALILIHNHPSGDP 191 Query: 115 TPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +PS+ D +T++L Q +LV ++ DH+IVG Q S A L+ Sbjct: 192 SPSREDVAVTKQLKQACELVGAQLLDHIIVGKNQHVSLAREKLI 235 >UniRef50_B9L1S0 DNA repair protein radC homolog n=4 Tax=Bacteria RepID=B9L1S0_THERP Length = 261 Score = 146 bits (370), Expect = 2e-34, Method: Composition-based stats. Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 2/159 (1%) Query: 1 MKQLSFLPG--EMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREE 58 + L G E + R L E + V MA LE+E+ Sbjct: 98 LASLRRFHGLGEAKAAKLKAALELGRRLALAQPEERPVIRTPEDVYAIAGAEMATLEQEQ 157 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 RV+ LD +N+++ T+ G +N +V E+ + A+ N A++L HNHPSG+ TPS+ Sbjct: 158 LRVVLLDTRNRVVRTVTVAQGHVNGAQVRIAELFREAIRANTPALVLLHNHPSGDPTPSR 217 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGL 157 D LT+ V+ L+ I V DHL++G + S GL Sbjct: 218 QDIELTESAVEAGTLLGIEVVDHLVIGHGRFCSLRRLGL 256 >UniRef50_B5CP31 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B5CP31_9FIRM Length = 168 Score = 146 bits (370), Expect = 2e-34, Method: Composition-based stats. Identities = 50/138 (36%), Positives = 76/138 (55%), Gaps = 2/138 (1%) Query: 23 LRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTIN 82 +R + S AV E + ++ +RE F +L + N Q+I + GTIN Sbjct: 20 IRLVREPSLYSEQILDSPQAVVELMAKELSQYDREVFCILNMKNNGQVINMNLVSVGTIN 79 Query: 83 RTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHL 142 + V PREV K ++ NA+A+I HNHPSG PS+ D +T++L + QL+ I + DH+ Sbjct: 80 ASLVIPREVFKSSILANASAIIGLHNHPSGNVKPSKEDMIVTRKLQKCGQLLGIELLDHI 139 Query: 143 IVGG--RQIYSFAEHGLL 158 IVGG ++ SF E +L Sbjct: 140 IVGGTNGKMLSFREEKML 157 >UniRef50_D2EK65 DNA repair protein n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EK65_PEDAC Length = 225 Score = 146 bits (370), Expect = 2e-34, Method: Composition-based stats. Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 3/149 (2%) Query: 13 PQDRRLIQRALRALDRHLHEPGV---AFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQ 69 P + ++ A+ R +P + + + +E +L LD +NQ Sbjct: 74 PAESLALEAAIELGRRVQRQPIHLLGKVLGSAQIGNLMVARFQKNPQEHLVLLCLDTKNQ 133 Query: 70 LIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQ 129 + +F G +N EVHPRE++ L +++ IL HNHPSG PS D T+++ + Sbjct: 134 IKQERVIFKGGLNSAEVHPREIMAEVLRYSSNGFILVHNHPSGNVEPSMNDVAFTKKMKK 193 Query: 130 VLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 + L+ IR+ DHLIVG + +S AE+ +L Sbjct: 194 IGDLMGIRLIDHLIVGDQTYWSAAENRVL 222 >UniRef50_C1SJ65 DNA repair protein radc n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SJ65_9BACT Length = 221 Score = 146 bits (369), Expect = 2e-34, Method: Composition-based stats. Identities = 49/157 (31%), Positives = 81/157 (51%), Gaps = 3/157 (1%) Query: 5 SFLPGEMTPQDR---RLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRV 61 + G + + R + V ++L+ +A ++E F Sbjct: 65 KNIKGLGEEAQMFFGAIREFFARLGYEDIDREAVIIDKPEKAAQFLKYKIAYDKKEHFVA 124 Query: 62 LYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADK 121 L+LD +L+ E LF GT++R V+PRE+ +RA+ A VI+AHNHPSG +PS+ D Sbjct: 125 LFLDVNKKLLGFENLFKGTVDRLAVYPREIAERAITSKATHVIVAHNHPSGNMSPSETDI 184 Query: 122 TLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 TLT +L++ L +DI + DH+I+ + YSF ++ Sbjct: 185 TLTDKLIKALAALDINLADHIIITTKGFYSFKREQVI 221 >UniRef50_Q0F0W4 DNA repair protein RadC n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F0W4_9PROT Length = 261 Score = 146 bits (369), Expect = 2e-34, Method: Composition-based stats. Identities = 48/158 (30%), Positives = 82/158 (51%), Gaps = 1/158 (0%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 +K++ + GE LI++ VR +LRL + E F Sbjct: 105 LKEVHGI-GEGGALFLTLIRQVEVRYLASDLPGRQLLYRPERVRAYLRLLVQGRGMECFG 163 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 ++ D Q++L+ + LF GT++RT V+PR ++KRAL +A +IL HNHP G S D Sbjct: 164 AMFTDQQHRLLTTQILFEGTVDRTAVYPRNLMKRALELDARGMILFHNHPGGTPHASNED 223 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 LT+R+ + +++++ DH ++ +++ SF EHG Sbjct: 224 IELTRRMAEACAPLELKILDHFLIADKEVLSFREHGWF 261 >UniRef50_Q1MS20 DNA repair proteins n=3 Tax=Desulfovibrionaceae RepID=Q1MS20_LAWIP Length = 226 Score = 146 bits (369), Expect = 2e-34, Method: Composition-based stats. Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 2/158 (1%) Query: 3 QLSFLP--GEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 +L +P GE +LI+ + + V E + EE Sbjct: 69 ELETIPQFGEALSAFWKLIREIFARYAETPVREKIQLCTPKIVAEIAKARFTGCPHEEVW 128 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 + +D QN+LI+ E L GTI + ++PR+ ++ L A+ IL HNHP G + S D Sbjct: 129 IATVDTQNRLISWERLSKGTIGSSPLYPRDTIEIVLKRKASGFILVHNHPGGSSNASSFD 188 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +T+ L + Q +++R+ DH+IV + YS GLL Sbjct: 189 IEITRHLEHIAQSINLRLIDHIIVTEKNCYSIRNDGLL 226 >UniRef50_B0G8S0 Putative uncharacterized protein n=5 Tax=Firmicutes RepID=B0G8S0_9FIRM Length = 860 Score = 146 bits (368), Expect = 3e-34, Method: Composition-based stats. Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 1/144 (0%) Query: 14 QDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAH 73 +L Q A+R +++ + + ++ ++RE F ++ L I Sbjct: 1 MADKLEQVAIRMVEQPPLYSNEPMNNPDVAIRVMNEFLSQMDRELFCIVNLQADLTPINM 60 Query: 74 ETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQL 133 + G++N ++PRE+ K A+ NA +++L HNHPSG TPS +D T R+ ++ +L Sbjct: 61 NIVSVGSLNEALINPREIFKSAILSNAHSMMLIHNHPSGNLTPSTSDIQTTARMQELGEL 120 Query: 134 VDIRVPDHLIVGGRQ-IYSFAEHG 156 + I + DH+I G YSF + G Sbjct: 121 MGISLVDHIITGRNGNYYSFRDKG 144 >UniRef50_Q4EGF4 DNA repair protein RadC n=7 Tax=Bacilli RepID=Q4EGF4_LISMO Length = 147 Score = 145 bits (367), Expect = 3e-34, Method: Composition-based stats. Identities = 49/147 (33%), Positives = 71/147 (48%), Gaps = 4/147 (2%) Query: 16 RRLIQRALRA---LDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIA 72 I +R + S + + +RE F V+ L+ +N ++A Sbjct: 1 METILEVVRIEQIIREAEEGVDYIIRSPEDGAKIASRFIGRDDREVFFVMCLNTKNNVVA 60 Query: 73 HETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQ 132 G++N + VHPREV K A+ N A+VILAH HPSG+ PS D +T+RLV+ + Sbjct: 61 VHRCHVGSLNSSIVHPREVFKSAILNNVASVILAHQHPSGDIKPSMEDINVTKRLVEAGK 120 Query: 133 LVDIRVPDHLIV-GGRQIYSFAEHGLL 158 L+ I V DHLIV S E G + Sbjct: 121 LLGIEVLDHLIVNSDNSFTSLKERGYI 147 >UniRef50_C7NDB9 DNA repair protein RadC n=4 Tax=Fusobacteriaceae RepID=C7NDB9_LEPBD Length = 240 Score = 145 bits (367), Expect = 4e-34, Method: Composition-based stats. Identities = 54/150 (36%), Positives = 94/150 (62%), Gaps = 1/150 (0%) Query: 10 EMTPQDRRLIQRALRA-LDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQN 68 E T +L+ + L + +H ++ TS + +L+ + + E F+VL+L+ QN Sbjct: 91 ERTVVFLKLLSEIIENGLYKKIHNKKISITSNIKLLNYLKCSLLKRDIEVFKVLFLNTQN 150 Query: 69 QLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLV 128 +L+ E LF GTI+R+ ++ RE++K+ L +NA +VIL HNHP+G PS +D LT+++ Sbjct: 151 ELMKEEELFYGTIDRSTIYIRELIKKILEYNAKSVILVHNHPAGSLKPSDSDILLTKKVK 210 Query: 129 QVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +V + ++IR+ DHLI+ + +SF E G+L Sbjct: 211 EVFESMEIRLLDHLIISEQGYFSFLEGGIL 240 >UniRef50_B1H050 DNA repair protein RadC n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1H050_UNCTG Length = 229 Score = 145 bits (367), Expect = 4e-34, Method: Composition-based stats. Identities = 40/158 (25%), Positives = 83/158 (52%), Gaps = 2/158 (1%) Query: 3 QLSFLPGEM--TPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 QL + G + + +++ + + +S V+++L ++ E+F Sbjct: 72 QLKGIKGISDYSAEFLLFLKKFISLYLSLDIKEKDRLSSPKNVKDYLISTLSGENIEKFY 131 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 + L++ N++ + +GT+N++ + PR++ + AL AA+V++AHNHP G PSQ D Sbjct: 132 AILLNSGNRVTDCLEIESGTVNKSLLIPRKIAEIALKCRAASVVIAHNHPGGTLKPSQND 191 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 T + + L+ ++I + DH+I+ +SF E+ L+ Sbjct: 192 INATVAVKKALESIEISLLDHIIISNNNYFSFKEYSLI 229 >UniRef50_C1A4H3 DNA repair protein RadC n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A4H3_GEMAT Length = 244 Score = 145 bits (367), Expect = 4e-34, Method: Composition-based stats. Identities = 56/139 (40%), Positives = 75/139 (53%) Query: 20 QRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTG 79 R + E G+ V + EEF V LD Q++L + G Sbjct: 106 LELGRRMAGEAREAGLPLRGPRDVAAAFAPRLQDAPVEEFHVAILDAQHRLERDVLITRG 165 Query: 80 TINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVP 139 +N + VHPREV + A+ AAAVIL HNHPSG+ TPS D+ +T++LV +L+DI V Sbjct: 166 LLNSSLVHPREVFREAIAERAAAVILVHNHPSGDPTPSAEDRAVTEQLVAAGRLLDIPVH 225 Query: 140 DHLIVGGRQIYSFAEHGLL 158 DH+IVG + SFAE GLL Sbjct: 226 DHIIVGRGRYVSFAEAGLL 244 >UniRef50_Q4V1K6 Possible DNA repair protein n=7 Tax=Bacillus cereus group RepID=Q4V1K6_BACCZ Length = 151 Score = 145 bits (367), Expect = 4e-34, Method: Composition-based stats. Identities = 40/150 (26%), Positives = 73/150 (48%), Gaps = 2/150 (1%) Query: 11 MTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMA--ALEREEFRVLYLDNQN 68 M + + ++ ++ T + R + + E F V L+ +N Sbjct: 1 MGKRIMVQSVKLVKESNKIYDVERKRITCPDDINILARAVLCIDEMPHEVFGVFNLNTKN 60 Query: 69 QLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLV 128 ++I + G+IN + VHPRE + A+ NAA+++ HNHPSG S D+ +T+RL Sbjct: 61 EIIGCSIVSQGSINSSVVHPRETFRTAILNNAASIVCFHNHPSGNPDASPEDREVTKRLA 120 Query: 129 QVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 + +++ I + DH+I+G + S E G + Sbjct: 121 ECGKILGIELLDHVIIGEHRFVSLREKGCI 150 >UniRef50_Q8RF15 UPF0758 protein FN0909 n=11 Tax=Fusobacterium RepID=Y909_FUSNN Length = 232 Score = 145 bits (367), Expect = 4e-34, Method: Composition-based stats. Identities = 43/132 (32%), Positives = 79/132 (59%) Query: 27 DRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEV 86 + + + + ++ + ++LR + E E+F V+YL + N++I E GT++R+ V Sbjct: 101 KKLIDKETLKISNKDILLKYLRNKIGYEEIEKFYVIYLSSSNEVIEFEENSVGTLDRSSV 160 Query: 87 HPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGG 146 +PRE+ K+ ++ NA ++ILAHNHPS TPS++D LT + + L+ + +H+I+ Sbjct: 161 YPREIYKKVINLNAKSIILAHNHPSDNITPSKSDIELTNEIAKGLKNFGALLIEHIIITK 220 Query: 147 RQIYSFAEHGLL 158 +SF E GL+ Sbjct: 221 NSYFSFLEEGLI 232 >UniRef50_A9BIK5 DNA repair protein RadC n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BIK5_PETMO Length = 222 Score = 145 bits (366), Expect = 5e-34, Method: Composition-based stats. Identities = 40/155 (25%), Positives = 78/155 (50%), Gaps = 4/155 (2%) Query: 1 MKQLSFLPG--EMTPQDRRLIQRALRALDRHLHEPG-VAFTSTHAVREWLRLHMAALERE 57 ++++S G ++ + + + TS M L E Sbjct: 60 LEEISKEKGVGKVGAINLKAALEIGKRYHLQKLRQKYQKVTSPEEAYHVC-EDMIYLSTE 118 Query: 58 EFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPS 117 R ++LD++ +I + + GT+N + HPR++ + A+ +NA + IL HNHPSG+ TPS Sbjct: 119 TVRAIFLDSKLHIITIKDISNGTVNMSIAHPRDIFREAIMYNAVSFILVHNHPSGDPTPS 178 Query: 118 QADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSF 152 D+ +T++++ +++ I + DH+I+G +SF Sbjct: 179 MHDRDITKKIMDSGEILGINMNDHIIIGKDSYFSF 213 >UniRef50_Q2QJL1 DNA repair protein RadC n=1 Tax=Acetobacter aceti RepID=Q2QJL1_ACEAC Length = 147 Score = 145 bits (366), Expect = 6e-34, Method: Composition-based stats. Identities = 49/145 (33%), Positives = 82/145 (56%) Query: 14 QDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAH 73 L++ + + R + + +LR M +RE+ RVL+L++Q+QL+A Sbjct: 3 VLLMLVRESGLRIQRARLQHSGILAEQQQLYAYLRAIMGPEKREQVRVLFLNDQHQLLAD 62 Query: 74 ETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQL 133 + + GT++ T V+PRE+V RAL A ++L HNHPSG+ TPS D +T ++ ++ Sbjct: 63 DIMGQGTVDHTPVYPREIVARALQLKATLLVLVHNHPSGDPTPSADDVVMTNQICGAAKI 122 Query: 134 VDIRVPDHLIVGGRQIYSFAEHGLL 158 ++I V DH+IV G ++ E G L Sbjct: 123 MNIHVWDHIIVAGEKLLCMREAGFL 147 >UniRef50_Q03EP2 DNA repair protein n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03EP2_PEDPA Length = 219 Score = 144 bits (365), Expect = 6e-34, Method: Composition-based stats. Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 2/154 (1%) Query: 5 SFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYL 64 +P + + R + + + + + + +E VL L Sbjct: 68 KNIPDATVALEAGI--ELGRRIQKQPIHLLGKVLGSAQLGQMMVSRFQKEPQEHLLVLCL 125 Query: 65 DNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLT 124 D +NQ+ +F G +N EVHPRE++ L +A + +L HNHPSG PS D T Sbjct: 126 DTKNQIKREIVVFKGGLNSAEVHPREIMVEVLRVSANSFVLIHNHPSGNIEPSTNDLAFT 185 Query: 125 QRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +++ +V L+ IR+ DHLIVG + +S AE + Sbjct: 186 KKMKKVGDLMGIRLIDHLIVGDQSYWSAAEKRFI 219 >UniRef50_A6L552 DNA repair protein n=5 Tax=Bacteroidales RepID=A6L552_BACV8 Length = 153 Score = 144 bits (365), Expect = 6e-34, Method: Composition-based stats. Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 3/139 (2%) Query: 23 LRALDRHLHEPGVAFTSTHAVREWLRLHMAALE---REEFRVLYLDNQNQLIAHETLFTG 79 + + + S+ ++L +E F+VL+L+ +Q++ + + G Sbjct: 15 VELTYKSTSKSRNKIYSSEDAYKYLLPTYKEGTICYKEYFKVLFLNQSSQVLGYTLISEG 74 Query: 80 TINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVP 139 I T V R +++ AL N+ A+ILAHNHPSG PS+ D +T+++ QL+ I V Sbjct: 75 GITDTTVDVRVILQAALLTNSVALILAHNHPSGNLKPSRQDMEITKQVKNAAQLMRITVI 134 Query: 140 DHLIVGGRQIYSFAEHGLL 158 DHLI+ YSFA+ G L Sbjct: 135 DHLILTDAGYYSFADEGQL 153 >UniRef50_B0MUL4 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MUL4_9BACT Length = 214 Score = 144 bits (365), Expect = 7e-34, Method: Composition-based stats. Identities = 50/153 (32%), Positives = 78/153 (50%), Gaps = 1/153 (0%) Query: 6 FLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLD 65 + + + + ++ R L P S++ V R + ++ EE LYL+ Sbjct: 62 GIGLKRAARIQAAVELGRRVLAARELGP-DPIGSSNDVVRIFRPLLTEMKHEECWCLYLN 120 Query: 66 NQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQ 125 N+++ + + G + T V R V+KRAL A +IL HNHPSG PS+ DK LT+ Sbjct: 121 TGNRIVERQRVSQGGVQATVVDHRLVIKRALELLATQIILVHNHPSGAALPSEQDKILTK 180 Query: 126 RLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 ++ + L DIR+ DHLI+ YSF + GLL Sbjct: 181 KIAEAAALFDIRLLDHLIIARGGEYSFRQSGLL 213 >UniRef50_B8KU95 DNA repair protein RadC n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KU95_9GAMM Length = 223 Score = 144 bits (364), Expect = 8e-34, Method: Composition-based stats. Identities = 60/136 (44%), Positives = 75/136 (55%) Query: 21 RALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGT 80 L S R +L+ + RE F LYLD++N+LI E LF GT Sbjct: 86 ELGDLLAEAGLYQRDLIASAVECRRFLQRRLGKQRREVFSALYLDSRNRLIVAEDLFAGT 145 Query: 81 INRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPD 140 I+ V PREVV+ AL +AA+VI+AHNHPSG PS+ D+ LT+RL L LVDIR+ D Sbjct: 146 IDGAAVFPREVVRGALLHDAASVIVAHNHPSGALAPSEQDRQLTRRLSSALSLVDIRLLD 205 Query: 141 HLIVGGRQIYSFAEHG 156 H IVG S A G Sbjct: 206 HFIVGFGDSVSLASLG 221 >UniRef50_C0QCU0 RadC2 n=2 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QCU0_DESAH Length = 187 Score = 144 bits (364), Expect = 9e-34, Method: Composition-based stats. Identities = 45/130 (34%), Positives = 79/130 (60%), Gaps = 5/130 (3%) Query: 34 GVAFTSTHAVREWLRLHMAAL---EREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPRE 90 + + ++ ++ + +RE+F +L L+ +N++I + TG+++ VHPRE Sbjct: 50 RESLSGPKQAQKIMKSLIEMQGQPDREQFCILMLNAKNKIIGLNIVSTGSLSSATVHPRE 109 Query: 91 VVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVG--GRQ 148 V+K A+ N++A+IL HNHPSG TPS D +T+R++Q ++ I V +HLI+ Sbjct: 110 VLKPAILANSSAMILCHNHPSGTLTPSPEDIAITKRIIQASDIMGITVHEHLIINMDDDS 169 Query: 149 IYSFAEHGLL 158 YSF+E+GL+ Sbjct: 170 FYSFSENGLI 179 >UniRef50_Q2GEH3 DNA repair protein RadC n=2 Tax=Neorickettsia RepID=Q2GEH3_NEOSM Length = 236 Score = 144 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 2/157 (1%) Query: 4 LSFLPGEMTP--QDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRV 61 L + G R ++ +++A+ R S +V ++LRL + E RV Sbjct: 80 LRSVNGVSDAVVALIRTVRESMKAILRKDLTSRTTLKSWKSVVDYLRLSIGNKPVETIRV 139 Query: 62 LYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADK 121 L+L+ + LI G + T + RE++K+ L A+A+++AHNHPSG PSQ D Sbjct: 140 LFLNKKYTLIREYVQELGAADHTPLCMREIIKKCLTCGASAMVIAHNHPSGNPLPSQEDL 199 Query: 122 TLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 +T +L ++ Q VD+++ DH IV +SF +GLL Sbjct: 200 LITGKLKKICQKVDVQLVDHFIVTPHDHFSFVVNGLL 236 >UniRef50_Q0FHF8 DNA repair protein RadC n=1 Tax=Roseovarius sp. HTCC2601 RepID=Q0FHF8_9RHOB Length = 168 Score = 144 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 53/151 (35%), Positives = 83/151 (54%), Gaps = 4/151 (2%) Query: 11 MTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQL 70 + + I A L RH S + ++L L+ E FRVL LD +N+L Sbjct: 17 FSEAEIETIDAARDILRRHARATA-VLQSWTMLTDYLALNAVRERVEVFRVLLLDRKNKL 75 Query: 71 IAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQV 130 I + + G+I+ V+ EV++ AL +A+A+IL HNHPSG+ PSQAD +T+++V Sbjct: 76 IRDKIMSRGSIDHVPVYVSEVMRSALVLDASALILCHNHPSGDPQPSQADIDMTRKIVDA 135 Query: 131 LQLVDIRVPDHLIVGGRQ---IYSFAEHGLL 158 +++DI + DHLIVG + +S G+L Sbjct: 136 CRVMDITLHDHLIVGFGREQAAFSMRAAGML 166 >UniRef50_C0R372 DNA repair protein RadC, putative n=11 Tax=Wolbachia RepID=C0R372_WOLWR Length = 218 Score = 142 bits (360), Expect = 2e-33, Method: Composition-based stats. Identities = 44/158 (27%), Positives = 81/158 (51%), Gaps = 3/158 (1%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 +K + + + + R L L + E+L + + ERE + Sbjct: 64 LKVIEGVTDSAVAMIMCVKETLERVLKEKLKSE--PIMDLQGIVEYLNVSIGHSERECVK 121 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 +LYL+ + QLI E+ + G + + V+ +E+ ++AL NA ++I++HNHP G PS+ D Sbjct: 122 ILYLNKRRQLIGEES-YIGEMEKAPVYIKEITRKALMKNATSIIMSHNHPGGSLEPSEED 180 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 + +T+ L V +++ DH+I+ +SF E+GLL Sbjct: 181 QAVTKSLAAACSTVSVKLFDHIIITSGGYFSFRENGLL 218 >UniRef50_Q93MC6 DNA repair protein RadC n=1 Tax=Clostridium perfringens RepID=Q93MC6_CLOPE Length = 145 Score = 142 bits (360), Expect = 3e-33, Method: Composition-based stats. Identities = 45/132 (34%), Positives = 75/132 (56%) Query: 27 DRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEV 86 ++ L V E ++ + ++RE V+ LD +N++ + GT+N + V Sbjct: 14 EQSLQIEKDIIKKPEQVFEVVKNFLGEVDREYLIVIVLDVKNKINSISVASVGTLNSSIV 73 Query: 87 HPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGG 146 HPREV K A+ N A++ILAHNHPSG+T+PS+ D +T R+ + L+ I + DH+I+G Sbjct: 74 HPREVFKTAILANGASIILAHNHPSGDTSPSKDDINITTRIKECGVLMGIELLDHVILGD 133 Query: 147 RQIYSFAEHGLL 158 + S G++ Sbjct: 134 EKFISLKNEGII 145 >UniRef50_C0GR82 DNA repair protein RadC n=2 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GR82_9DELT Length = 145 Score = 142 bits (359), Expect = 3e-33, Method: Composition-based stats. Identities = 45/137 (32%), Positives = 75/137 (54%), Gaps = 1/137 (0%) Query: 22 ALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTI 81 L L P +S A L + E F VL++DN+N++I + + GT+ Sbjct: 10 LLDQLYAMESSPDYVLSSPEAAVIQLLP-FRKKKTENFVVLFVDNKNRMICKKVVAKGTV 68 Query: 82 NRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDH 141 ++ V PRE+++ A+ A+ +IL HNHP G + PS+ D+ LT ++ ++ + IRV DH Sbjct: 69 DQIPVFPREIIRHAILKQASGIILGHNHPGGASEPSKQDRELTSKIKRIAMELGIRVLDH 128 Query: 142 LIVGGRQIYSFAEHGLL 158 +I+ +SF E+G L Sbjct: 129 IIICDSGHFSFQENGYL 145 >UniRef50_C8N8A0 DNA repair protein RadC n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N8A0_9GAMM Length = 224 Score = 142 bits (359), Expect = 3e-33, Method: Composition-based stats. Identities = 55/156 (35%), Positives = 85/156 (54%) Query: 1 MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFR 60 ++ + L T + + + A R + + +P +F + VR++L + E F Sbjct: 67 LQAVRGLGKAKTAEILAVTELARRFMREEMRQPSWSFKTAADVRDYLLMQFKGQALEAFG 126 Query: 61 VLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQAD 120 VL+L+ Q+ IA E L G + V R+++ ALH +AAAVILAHNHP+G PS D Sbjct: 127 VLFLNQQHGFIAFERLAAGAAAKVPVPVRQLIASALHHHAAAVILAHNHPAGSGAPSAED 186 Query: 121 KTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHG 156 + +T+ L L L+DIR+ DH IV G ++ S E G Sbjct: 187 RDVTRHLDDALALMDIRLLDHFIVAGNEMVSMRERG 222 >UniRef50_A9B8G6 DNA repair protein RadC n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B8G6_HERA2 Length = 204 Score = 142 bits (359), Expect = 4e-33, Method: Composition-based stats. Identities = 55/158 (34%), Positives = 77/158 (48%), Gaps = 5/158 (3%) Query: 2 KQLSFLPGEMTPQDRRLIQRALRALDRHLHE--PGVAFTSTHAVREWLRLHMAALEREEF 59 ++L+ L G R A L E G T+ V L+ M+ LE+EE Sbjct: 46 EELTPLVGRAHAIRLRT---AFAIGHAKLAEAVTGEPITTPMQVVALLQAEMSHLEQEEL 102 Query: 60 RVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQA 119 RV+ L Q +I T+ GT+N ++ + L NAA+VILAHNHPSG S Sbjct: 103 RVISLSTQAHIIGMHTVVVGTLNTAYCRMADLFREPLRRNAASVILAHNHPSGMVWASPE 162 Query: 120 DKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGL 157 D LT++ +Q QL++I + DHLI+G S E L Sbjct: 163 DILLTKQAIQAGQLLEIELLDHLIIGKGGYTSMRERRL 200 >UniRef50_A9NF52 DNA repair protein n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NF52_ACHLI Length = 217 Score = 142 bits (358), Expect = 4e-33, Method: Composition-based stats. Identities = 45/157 (28%), Positives = 80/157 (50%), Gaps = 2/157 (1%) Query: 1 MKQLSFLPGEMTPQDRRLIQ--RALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREE 58 ++ L + G + +I R L T + V L+ M+ L +E Sbjct: 56 VEDLLTIYGISDAKATTIIAAVELGRRLSDRKKPVRKMITESSEVYHLLKEDMSYLRKEH 115 Query: 59 FRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQ 118 VL LD + L+ +ET++ GT + +V +++ K A+ A +I+ HNHPSG++TPSQ Sbjct: 116 LIVLCLDIKGNLLKNETIYMGTTSSIQVSVKDLFKSAVRIGAFGIIVVHNHPSGDSTPSQ 175 Query: 119 ADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEH 155 AD LT+ + +++ I + DH+I+G + +S+ Sbjct: 176 ADDKLTKLIKNAGEVLSIELIDHIIIGRNEFFSYRRQ 212 >UniRef50_B8J197 DNA repair protein RadC n=4 Tax=Desulfovibrio RepID=B8J197_DESDA Length = 229 Score = 142 bits (358), Expect = 4e-33, Method: Composition-based stats. Identities = 45/152 (29%), Positives = 67/152 (44%), Gaps = 4/152 (2%) Query: 3 QLSFLPGEMTPQDRRLIQRALRALDRH---LHEPGVAFTSTHAVREWLRLHMAALEREEF 59 +L +PG P R+ + AV + +A EE Sbjct: 72 ELLAVPG-FGPGLMTFFTALRETYSRYTDSAVRKREVLATPQAVARMAQSRLAGCPHEEC 130 Query: 60 RVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQA 119 + +D +N+L A E L G + V PR+V + AL A+ +I+ HNHP G PS+A Sbjct: 131 WLALVDQRNRLTAWERLRQGGVAEVPVQPRDVFEAALLRKASGIIVVHNHPGGNPAPSEA 190 Query: 120 DKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYS 151 DKT T L ++ + +R DH+IV YS Sbjct: 191 DKTFTAELQRLAPQLGLRFLDHVIVTEGDCYS 222 >UniRef50_Q4FQM6 UPF0758 protein Psyc_1834 n=3 Tax=Moraxellaceae RepID=Y1834_PSYA2 Length = 227 Score = 141 bits (357), Expect = 5e-33, Method: Composition-based stats. Identities = 56/167 (33%), Positives = 84/167 (50%), Gaps = 10/167 (5%) Query: 1 MKQLSFLPGE-------MTPQDRRLIQRALRALDRHL---HEPGVAFTSTHAVREWLRLH 50 + +L P E + P I +L R+L + G + V++++ H Sbjct: 57 LAELLAAPQETVLACHGIGPAKYAQILASLEIGRRYLDSQLKTGQGLGRSQMVKDYISTH 116 Query: 51 MAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHP 110 + RE F VL LDN LI E LFTG I+ V + V++ AL + +I+AHNHP Sbjct: 117 LRGEPREVFAVLCLDNALNLINFEILFTGGISSCSVCIKHVLRHALSHATSQLIIAHNHP 176 Query: 111 SGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGL 157 + TPS AD LT L + L+D+ + DH+IVG + S+AE+ L Sbjct: 177 HTDATPSTADNLLTYELKKACDLIDLSLIDHVIVGRNETLSYAENCL 223 >UniRef50_Q0GNI5 Smu18B n=1 Tax=uncultured organism RepID=Q0GNI5_9ZZZZ Length = 154 Score = 141 bits (356), Expect = 8e-33, Method: Composition-based stats. Identities = 56/146 (38%), Positives = 84/146 (57%) Query: 13 PQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIA 72 P R+++ A +R + + S L +A E E F V+ L+ Q+++IA Sbjct: 9 PAWCRIVRERPEAFEREVLAENLHVRSPRDAVVALAPRLAREEVEVFLVIALNAQHRMIA 68 Query: 73 HETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQ 132 + + G N + VHPREV + A+ AAA+I+AHNHPSG+ PS D+ +T++LV + Sbjct: 69 LQEVTRGIQNCSLVHPREVFRIAIAIGAAAIIVAHNHPSGDPAPSADDRAVTEQLVAAGR 128 Query: 133 LVDIRVPDHLIVGGRQIYSFAEHGLL 158 L+D+ V DH+IVG SFAE GLL Sbjct: 129 LLDLPVHDHIIVGAGSYTSFAEAGLL 154 >UniRef50_C7GIB3 DNA repair protein RadC n=9 Tax=Bacteria RepID=C7GIB3_9FIRM Length = 179 Score = 141 bits (355), Expect = 9e-33, Method: Composition-based stats. Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 2/138 (1%) Query: 23 LRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTIN 82 +R + F + + + M +RE V+ L + + I G++N Sbjct: 14 VRLVKDAPIYSEHTFNNPADIAAVMGDCMCQFDREVVCVVNLRSDLKPINVHFASVGSLN 73 Query: 83 RTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHL 142 HPRE+ K ++ NAA+++L H HPSG PS+AD +T R+ ++ +L+ I + DH+ Sbjct: 74 EAMAHPRELFKSSILSNAASMMLIHCHPSGNVFPSKADTMMTDRMNKLCELMGIPLIDHI 133 Query: 143 IVGGR--QIYSFAEHGLL 158 IVGG + +SF E G++ Sbjct: 134 IVGGDNREFFSFREKGMI 151 >UniRef50_A8RIH3 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8RIH3_9CLOT Length = 178 Score = 141 bits (355), Expect = 1e-32, Method: Composition-based stats. Identities = 44/150 (29%), Positives = 71/150 (47%), Gaps = 7/150 (4%) Query: 10 EMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQ 69 ++ ++++ FT E + +RE VL L+ + + Sbjct: 27 KVGIVHLQMVREGRALYGM------TRFTDPGMAAEMVWPLFEMADREMALVLSLNTKLE 80 Query: 70 LIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQ 129 A E G +N + R++ K A+ NAA +I HNHPSG+ PS D+ LT+RL + Sbjct: 81 PQALEIAAVGGLNACSIDCRDIFKHAVLNNAAFIICFHNHPSGDPKPSMEDRKLTKRLEE 140 Query: 130 VLQLVDIRVPDHLIVGGR-QIYSFAEHGLL 158 +++ I + DH+IVG YSF E G+L Sbjct: 141 CGKILGIPLIDHIIVGEGPCCYSFKEQGML 170 >UniRef50_A1BGW3 DNA repair protein RadC n=2 Tax=Chlorobium RepID=A1BGW3_CHLPD Length = 166 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 42/134 (31%), Positives = 68/134 (50%), Gaps = 2/134 (1%) Query: 27 DRHLHEPGVAFTSTHAVREWLRLH-MAALEREEFRVLYLDNQNQLIAHETLFTGTINRTE 85 + + T + + L EE V +L +N + + + GT+N + Sbjct: 32 ESQVLYDNKKITVAADICSICNTIGLPDLPHEELHVFFLSTKNYITGTQLVSRGTLNASL 91 Query: 86 VHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVG 145 +HPREV + A+ NA A+IL HNHPSG PS ADK +T+++ ++ I + DH+I+G Sbjct: 92 IHPREVFRGAILANANAIILVHNHPSGNPEPSNADKQVTKQIRSSADIIGIELLDHVIIG 151 Query: 146 GRQ-IYSFAEHGLL 158 +SF + GL Sbjct: 152 SNGNHFSFRQEGLF 165 >UniRef50_A4XMN4 DNA repair protein RadC n=2 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XMN4_CALS8 Length = 163 Score = 140 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 4/161 (2%) Query: 2 KQLSFLPGEMTPQDRRLIQRALRA--LDRHLHEPGVAFTSTHAVREWLRLHMAA--LERE 57 QLSF ++ + R I + R + + ++L+ H+ E Sbjct: 3 NQLSFFDRKVYAPEPRCIAQKYRISLIKEESFAYNFQLANVRLAVDFLKKHLKLHLEPEE 62 Query: 58 EFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPS 117 VL LD Q L A + GT++ + RE+ KR L N ++I+AHNHP G PS Sbjct: 63 VLVVLCLDVQLNLNAIFEVSRGTLDMAPANTREIFKRVLLTNCHSIIIAHNHPGGSAKPS 122 Query: 118 QADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL 158 D T+++ + QL+DIR+ DH+IV YSF++ G+L Sbjct: 123 MDDIKTTEKIKEAAQLLDIRLNDHIIVTEEDYYSFSQAGIL 163 >UniRef50_Q73P26 DNA repair protein RadC n=2 Tax=Treponema RepID=Q73P26_TREDE Length = 225 Score = 139 bits (352), Expect = 2e-32, Method: Composition-based stats. Identities = 54/154 (35%), Positives = 78/154 (50%), Gaps = 3/154 (1%) Query: 4 LSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLY 63 L + G M + A+ R+ + V L+ H A +RE F + Sbjct: 69 LRSIRG-MGDSKISTVLAAMELGRRYYDNKNRTISHPTDVVPLLQ-HYADRDREHFICVS 126 Query: 64 LDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTL 123 L+ N++IA + GTINRT VHPREV L AAA+I AHNHPSG PS D L Sbjct: 127 LNGANEIIATRVVSVGTINRTIVHPREVYSDPLKDRAAAIIAAHNHPSGNLEPSSEDMEL 186 Query: 124 TQRLVQVLQLVDIRVPDHLI-VGGRQIYSFAEHG 156 T+R+ + +++ I++ DH+I V +SF + G Sbjct: 187 TKRIYEAGKILGIKLLDHIILVPNGNFFSFVQSG 220 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.313 0.166 0.467 Lambda K H 0.267 0.0507 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,100,231,700 Number of Sequences: 3077464 Number of extensions: 49381612 Number of successful extensions: 166254 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 1127 Number of HSP's successfully gapped in prelim test: 23 Number of HSP's that attempted gapping in prelim test: 164927 Number of HSP's gapped (non-prelim): 1166 length of query: 158 length of database: 1,040,396,356 effective HSP length: 118 effective length of query: 40 effective length of database: 677,255,604 effective search space: 27090224160 effective search space used: 27090224160 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (20.6 bits) S2: 88 (38.2 bits)