BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (557 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_Q48082 30S ribosomal protein S1 n=129 Tax=Proteobacteri... 863 0.0 UniRef50_Q89AJ3 30S ribosomal protein S1 n=296 Tax=Proteobacteri... 813 0.0 UniRef50_Q6NDP1 30S ribosomal protein S1 n=165 Tax=Proteobacteri... 545 e-153 UniRef50_B8FI70 Ribosomal protein S1 n=14 Tax=Proteobacteria Rep... 520 e-146 UniRef50_C4XQS6 30S ribosomal protein S1 n=3 Tax=Desulfovibrio R... 514 e-144 UniRef50_Q1MQB8 Ribosomal protein S1 n=2 Tax=Desulfovibrionaceae... 492 e-137 UniRef50_A8ZTA2 Ribosomal protein S1 n=22 Tax=Deltaproteobacteri... 491 e-137 UniRef50_Q1IHI9 SSU ribosomal protein S1P n=6 Tax=Bacteria RepID... 488 e-136 UniRef50_D0LJ72 Ribosomal protein S1 n=1 Tax=Haliangium ochraceu... 481 e-134 UniRef50_C1FAB9 Ribosomal protein S1 n=2 Tax=Bacteria RepID=C1FA... 474 e-132 UniRef50_B3E440 Ribosomal protein S1 n=3 Tax=Deltaproteobacteria... 470 e-131 UniRef50_B6AR90 Ribosomal protein S1 n=1 Tax=Leptospirillum sp. ... 466 e-130 UniRef50_Q1RJH1 30S ribosomal protein S1 n=16 Tax=Alphaproteobac... 457 e-127 UniRef50_Q9Z8M3 30S ribosomal protein S1 n=18 Tax=Chlamydiae/Ver... 446 e-124 UniRef50_D1N749 Ribosomal protein S1 n=1 Tax=Victivallis vadensi... 443 e-123 UniRef50_C9RMY1 Ribosomal protein S1 n=1 Tax=Fibrobacter succino... 440 e-122 UniRef50_C1A406 30S ribosomal protein S1 n=1 Tax=Gemmatimonas au... 436 e-121 UniRef50_B3QSU3 Ribosomal protein S1 n=1 Tax=Chloroherpeton thal... 436 e-120 UniRef50_B2UME1 Ribosomal protein S1 n=6 Tax=Chlamydiae/Verrucom... 424 e-117 UniRef50_B0VI92 30S ribosomal subunit protein S1 (Modular protei... 422 e-116 UniRef50_B3TCT6 Putative S1 RNA binding domain protein n=2 Tax=r... 419 e-115 UniRef50_Q2S1M7 Ribosomal protein S1, putative n=2 Tax=Rhodother... 416 e-114 UniRef50_D2R4L6 Ribosomal protein S1 n=7 Tax=Planctomycetales Re... 411 e-113 UniRef50_Q8KTS5 Ribosomal protein S1 n=1 Tax=Candidatus Tremblay... 409 e-112 UniRef50_Q0EYT6 Ribosomal protein S1 n=1 Tax=Mariprofundus ferro... 404 e-111 UniRef50_A4SGB6 SSU ribosomal protein S1P n=12 Tax=Chlorobiaceae... 399 e-109 UniRef50_C6XS49 RNA binding S1 domain protein n=62 Tax=Bacteroid... 393 e-107 UniRef50_B5YH71 30S ribosomal protein S1 n=1 Tax=Thermodesulfovi... 389 e-106 UniRef50_Q3YRK4 SSU ribosomal protein S1P n=21 Tax=Rickettsiales... 379 e-103 UniRef50_Q027A8 SSU ribosomal protein S1P n=2 Tax=Acidobacteria ... 364 4e-99 UniRef50_A5CF24 30S ribosomal protein S1 n=2 Tax=Orientia tsutsu... 348 3e-94 UniRef50_Q2GE01 Ribosomal protein S1 n=2 Tax=Neorickettsia RepID... 342 3e-92 UniRef50_D0J9D1 30S ribosomal protein S1 n=25 Tax=Bacteria RepID... 332 2e-89 UniRef50_C1SLB2 4-hydroxy-3-methylbut-2-enyl diphosphate reducta... 327 9e-88 UniRef50_Q1IY12 RNA binding S1 n=9 Tax=Deinococci RepID=Q1IY12_D... 326 1e-87 UniRef50_C7LJY0 Putative ribosomal protein S1 n=1 Tax=Candidatus... 320 1e-85 UniRef50_B0SDL5 30S Ribosomal protein S1 n=6 Tax=Leptospira RepI... 319 2e-85 UniRef50_Q0PQN6 30S ribosomal subunit protein S1 (Fragment) n=2 ... 317 1e-84 UniRef50_B2S2M7 Ribosomal protein S1 n=5 Tax=Bacteria RepID=B2S2... 315 4e-84 UniRef50_C0QZM2 30S ribosomal protein S1 n=2 Tax=Brachyspira Rep... 296 2e-78 UniRef50_P46836 30S ribosomal protein S1 n=166 Tax=Actinobacteri... 295 3e-78 UniRef50_D0RRD0 30S ribosomal protein S1 n=1 Tax=alpha proteobac... 294 5e-78 UniRef50_Q1V1Q4 30S ribosomal protein S1 n=3 Tax=Candidatus Pela... 294 7e-78 UniRef50_UPI0001C3232B RNA binding S1 domain protein n=1 Tax=Con... 289 2e-76 UniRef50_Q67NT8 30S ribosomal protein S1 n=1 Tax=Symbiobacterium... 283 9e-75 UniRef50_B1I3Y7 Hydroxymethylbutenyl pyrophosphate reductase n=3... 283 1e-74 UniRef50_Q30ZT8 SSU ribosomal protein S1P n=1 Tax=Desulfovibrio ... 278 4e-73 UniRef50_A4J3N5 Hydroxymethylbutenyl pyrophosphate reductase n=3... 273 9e-72 UniRef50_C0GDV0 Hydroxymethylbutenyl pyrophosphate reductase n=1... 273 2e-71 UniRef50_D1B5G8 RNA binding S1 domain protein n=3 Tax=Synergista... 272 2e-71 UniRef50_C7RHT6 Hydroxymethylbutenyl pyrophosphate reductase n=8... 267 1e-69 UniRef50_A1HTW2 Hydroxymethylbutenyl pyrophosphate reductase n=4... 266 1e-69 UniRef50_C3XIZ7 30s ribosomal protein s1 n=6 Tax=Campylobacteral... 265 4e-69 UniRef50_Q2RIU7 Hydroxymethylbutenyl pyrophosphate reductase n=1... 263 9e-69 UniRef50_Q7VJV6 Ribosomal protein S1 n=3 Tax=Helicobacter RepID=... 262 2e-68 UniRef50_C6BYI5 RNA binding S1 domain protein n=4 Tax=Desulfovib... 261 4e-68 UniRef50_B8DPH9 RNA binding S1 domain protein n=4 Tax=Desulfovib... 259 1e-67 UniRef50_C5CIV0 RNA binding S1 domain protein n=1 Tax=Kosmotoga ... 258 3e-67 UniRef50_C5S7U3 RNA binding S1 domain protein n=1 Tax=Allochroma... 257 9e-67 UniRef50_Q9ZKF6 30S ribosomal protein S1 n=44 Tax=Epsilonproteob... 256 1e-66 UniRef50_C0QM45 RpsA1 n=2 Tax=Desulfobacteraceae RepID=C0QM45_DESAH 255 3e-66 UniRef50_B8J034 RNA binding S1 domain protein n=2 Tax=Desulfovib... 253 1e-65 UniRef50_B8CWY2 4-hydroxy-3-methylbut-2-enyl diphosphate reducta... 251 6e-65 UniRef50_A8ZTZ3 RNA binding S1 domain protein n=1 Tax=Desulfococ... 249 2e-64 UniRef50_A8F7S1 RNA binding S1 domain protein n=1 Tax=Thermotoga... 247 1e-63 UniRef50_C0GUF0 RNA binding S1 domain protein n=1 Tax=Desulfonat... 245 3e-63 UniRef50_B8G2Q3 Hydroxymethylbutenyl pyrophosphate reductase n=2... 245 3e-63 UniRef50_A9AV75 RNA binding S1 domain protein n=5 Tax=Chloroflex... 243 1e-62 UniRef50_A6CB07 30S ribosomal protein S1 n=1 Tax=Planctomyces ma... 242 3e-62 UniRef50_D1C7V0 RNA binding S1 domain protein n=2 Tax=Chloroflex... 241 7e-62 UniRef50_D1AGH2 RNA binding S1 domain protein n=1 Tax=Sebaldella... 241 8e-62 UniRef50_B0VFT2 Putative Ribosomal protein S1 n=1 Tax=Candidatus... 240 9e-62 UniRef50_D1Y3S9 30S ribosomal protein S1 n=1 Tax=Pyramidobacter ... 240 1e-61 UniRef50_C7NE91 RNA binding S1 domain protein n=3 Tax=Leptotrich... 237 7e-61 UniRef50_A1QYS7 SSU ribosomal protein S1P n=23 Tax=Borrelia RepI... 237 1e-60 UniRef50_D1VSI0 4-hydroxy-3-methylbut-2-enyl diphosphate reducta... 237 1e-60 UniRef50_A7G2Q4 Ribosomal protein S1 n=13 Tax=Clostridium RepID=... 236 2e-60 UniRef50_B9L032 30S ribosomal protein S1 n=1 Tax=Thermomicrobium... 236 2e-60 UniRef50_A3DDC0 Hydroxymethylbutenyl pyrophosphate reductase n=7... 235 3e-60 UniRef50_A6TRF8 RNA binding S1 domain protein n=2 Tax=Alkaliphil... 234 5e-60 UniRef50_C6PXA3 RNA binding S1 domain protein n=1 Tax=Clostridiu... 234 8e-60 UniRef50_B7IE33 4-hydroxy-3-methylbut-2-enyl diphosphate reducta... 231 4e-59 UniRef50_Q8RI52 4-hydroxy-3-methylbut-2-enyl diphosphate reducta... 231 5e-59 UniRef50_B5Y9T3 Ribosomal protein S1 n=1 Tax=Coprothermobacter p... 230 9e-59 UniRef50_A8Z6B9 Putative ribosomal protein S1 n=1 Tax=Candidatus... 230 9e-59 UniRef50_A7HME7 Hydroxymethylbutenyl pyrophosphate reductase n=1... 230 9e-59 UniRef50_B2A4N7 Hydroxymethylbutenyl pyrophosphate reductase n=1... 229 2e-58 UniRef50_A6DP56 30S ribosomal protein S1 n=1 Tax=Lentisphaera ar... 228 3e-58 UniRef50_C7H149 4-hydroxy-3-methylbut-2-enyl diphosphate reducta... 228 3e-58 UniRef50_C9LUH9 Hydroxymethylbutenyl pyrophosphate reductase n=1... 228 6e-58 UniRef50_D2L2R4 RNA binding S1 domain protein n=1 Tax=Desulfovib... 227 7e-58 UniRef50_Q0AXA2 Hydroxymethylbutenyl pyrophosphate reductase n=1... 226 2e-57 UniRef50_B3WE79 30S Ribosomal protein S1 n=52 Tax=Firmicutes Rep... 225 3e-57 UniRef50_A2ID48 RpsA n=1 Tax=Pasteuria ramosa RepID=A2ID48_9BACL 225 4e-57 UniRef50_P38494 30S ribosomal protein S1 homolog n=22 Tax=Bacill... 223 1e-56 UniRef50_Q0TNG2 Ribosomal protein S1 family n=9 Tax=Clostridium ... 221 6e-56 UniRef50_B1LBI3 RNA binding S1 domain protein n=5 Tax=Thermotoga... 220 9e-56 UniRef50_B1C7U3 Putative uncharacterized protein n=1 Tax=Anaerof... 220 1e-55 UniRef50_A9BGS2 RNA binding S1 domain protein n=1 Tax=Petrotoga ... 220 1e-55 UniRef50_C8WX93 RNA binding S1 domain protein n=2 Tax=Alicycloba... 218 4e-55 UniRef50_UPI00016C0B56 30S ribosomal protein S1 n=1 Tax=Epulopis... 216 2e-54 UniRef50_B0MQU3 Putative uncharacterized protein n=2 Tax=Bacteri... 215 4e-54 UniRef50_A4IQA6 30S ribosomal protein S1 n=10 Tax=Bacillaceae Re... 214 5e-54 UniRef50_O67462 Ribosomal protein S01 n=2 Tax=Aquificaceae RepID... 213 1e-53 UniRef50_B5YEY5 Ribosomal protein S1, putative n=2 Tax=Dictyoglo... 213 2e-53 UniRef50_C4V2L6 Possible 30S ribosomal protein S1 n=2 Tax=Seleno... 213 2e-53 UniRef50_A9B766 RNA binding S1 domain protein n=6 Tax=Chloroflex... 209 2e-52 UniRef50_P50889 40S ribosomal protein S1 n=37 Tax=Bacilli RepID=... 209 2e-52 UniRef50_B3T9S8 Putative S1 RNA binding domain protein n=1 Tax=u... 209 2e-52 UniRef50_C0QT24 Ribosomal protein S01 n=1 Tax=Persephonella mari... 209 2e-52 UniRef50_C1ZHL8 Ribosomal protein S1 n=1 Tax=Planctomyces limnop... 209 2e-52 UniRef50_Q1NY10 RNA binding S1 n=3 Tax=Deltaproteobacteria RepID... 209 3e-52 UniRef50_O06000 30S ribosomal protein S1 homolog n=76 Tax=Bacill... 207 7e-52 UniRef50_D1CBU2 RNA binding S1 domain protein n=1 Tax=Thermobacu... 205 4e-51 UniRef50_Q49XT0 30S ribosomal protein S1 n=6 Tax=Staphylococcace... 204 6e-51 UniRef50_Q5M0R3 30S ribosomal protein S1 n=88 Tax=Bacilli RepID=... 202 3e-50 UniRef50_Q1D6H1 Ribosomal protein S1 family protein n=2 Tax=Cyst... 201 5e-50 UniRef50_Q5HFU7 30S ribosomal protein S1 n=61 Tax=Staphylococcus... 201 7e-50 UniRef50_A8YV34 30S ribosomal protein S1 n=29 Tax=Lactobacillus ... 199 2e-49 UniRef50_A5N6D1 30S ribosomal protein S1 n=2 Tax=Clostridium klu... 199 2e-49 UniRef50_C8R0E8 RNA binding S1 domain protein n=1 Tax=Desulfuriv... 198 4e-49 UniRef50_A1AM10 SSU ribosomal protein S1P n=10 Tax=Desulfuromona... 196 2e-48 UniRef50_D1PP74 4-hydroxy-3-methylbut-2-enyl diphosphate reducta... 196 3e-48 UniRef50_D0LLG7 RNA binding S1 domain protein n=1 Tax=Haliangium... 195 4e-48 UniRef50_UPI00017435B0 LytB protein n=1 Tax=candidate division T... 195 4e-48 UniRef50_B0KVD5 30S ribosomal protein S1 n=1 Tax=uncultured cand... 194 6e-48 UniRef50_A9KLR6 Hydroxymethylbutenyl pyrophosphate reductase n=5... 192 4e-47 UniRef50_Q7X2Y7 Putative 30S ribosomal protein S1 (Fragment) n=1... 191 9e-47 UniRef50_C5NX49 30S ribosomal protein S1 n=1 Tax=Gemella haemoly... 189 3e-46 UniRef50_C1DT56 Ribosomal protein S01 n=3 Tax=Sulfurihydrogenibi... 188 4e-46 UniRef50_D1BMA5 Hydroxymethylbutenyl pyrophosphate reductase n=3... 188 5e-46 UniRef50_C9LMR5 Hydroxymethylbutenyl pyrophosphate reductase/rib... 186 2e-45 UniRef50_D2R2F1 RNA binding S1 domain protein n=1 Tax=Pirellula ... 184 1e-44 UniRef50_D1AVV2 RNA binding S1 domain protein n=1 Tax=Streptobac... 183 1e-44 UniRef50_Q7UWH7 30S ribosomal protein S1 n=1 Tax=Rhodopirellula ... 183 2e-44 UniRef50_UPI00016B22D3 RNA binding S1 domain protein n=2 Tax=can... 183 2e-44 UniRef50_A3ZTD7 30S ribosomal protein S1 n=2 Tax=Bacteria RepID=... 182 3e-44 UniRef50_UPI00016C5864 30S ribosomal protein S1 n=1 Tax=Gemmata ... 182 3e-44 UniRef50_B0K198 RNA binding S1 domain protein n=7 Tax=Thermoanae... 181 7e-44 UniRef50_Q4EP69 Ribosomal protein S1, putative (Fragment) n=1 Ta... 179 2e-43 UniRef50_C6P7Z4 RNA binding S1 domain protein n=1 Tax=Thermoanae... 179 3e-43 UniRef50_A6LQP2 RNA binding S1 domain protein n=7 Tax=Clostridiu... 179 3e-43 UniRef50_Q6MNP5 30S ribosomal protein S1 n=1 Tax=Bdellovibrio ba... 175 4e-42 UniRef50_A6GGH5 Ribosomal protein S1 n=1 Tax=Plesiocystis pacifi... 173 1e-41 UniRef50_A9ESM2 RpsA3 protein n=1 Tax=Sorangium cellulosum 'So c... 171 7e-41 UniRef50_D2RKJ8 Hydroxymethylbutenyl pyrophosphate reductase n=3... 169 3e-40 UniRef50_C9XMD9 Putative 30S ribosomal protein S1 n=7 Tax=Clostr... 157 1e-36 UniRef50_A4N3Y6 30S ribosomal protein S1 n=2 Tax=Haemophilus inf... 149 2e-34 UniRef50_A8V2R4 Ribosomal protein S01 n=1 Tax=Hydrogenivirga sp.... 144 7e-33 UniRef50_A5V0B5 RNA binding S1 domain protein n=3 Tax=Chloroflex... 143 2e-32 UniRef50_C6JH83 Putative uncharacterized protein n=2 Tax=Clostri... 142 4e-32 UniRef50_UPI000169A712 ribosomal protein S1 n=1 Tax=Yersinia pes... 139 2e-31 UniRef50_B9L9K6 30S ribosomal protein S1 n=2 Tax=Nautiliaceae Re... 138 5e-31 UniRef50_B2KCI0 RNA binding S1 domain protein n=1 Tax=Elusimicro... 138 7e-31 UniRef50_B4UDY4 RNA binding S1 domain protein n=4 Tax=Anaeromyxo... 138 7e-31 UniRef50_A9NGK8 Small subunit ribosomal protein S1 n=1 Tax=Achol... 137 7e-31 UniRef50_A9KQA3 RNA binding S1 domain protein n=1 Tax=Clostridiu... 134 1e-29 UniRef50_P73530 30S ribosomal protein S1 homolog A n=61 Tax=cell... 130 1e-28 UniRef50_C4FZ56 Putative uncharacterized protein n=1 Tax=Abiotro... 126 3e-27 UniRef50_A9WBG5 RNA binding S1 domain protein n=2 Tax=Chloroflex... 124 1e-26 UniRef50_A9B5U0 RNA binding S1 domain protein n=1 Tax=Herpetosip... 123 2e-26 UniRef50_D1A3N7 RNA binding S1 domain protein n=1 Tax=Thermomono... 123 2e-26 UniRef50_A9WG06 RNA binding S1 domain protein n=3 Tax=Chloroflex... 121 9e-26 UniRef50_B0MBX8 Putative uncharacterized protein n=7 Tax=Clostri... 120 2e-25 UniRef50_A4XKP1 Hydroxymethylbutenyl pyrophosphate reductase n=1... 119 3e-25 UniRef50_B4U6I5 RNA binding S1 domain protein n=1 Tax=Hydrogenob... 116 2e-24 UniRef50_A4RTM3 Plastid ribosomal protein S1, imported to chloro... 114 7e-24 UniRef50_C5RED5 RNA binding S1 domain protein n=1 Tax=Clostridiu... 114 1e-23 UniRef50_C1EEV9 Predicted protein n=2 Tax=Micromonas RepID=C1EEV... 112 4e-23 UniRef50_B8C8K9 RS1, ribosomal protein 1 (Fragment) n=1 Tax=Thal... 111 9e-23 UniRef50_D1X7G9 RNA binding S1 domain protein n=1 Tax=Streptomyc... 110 1e-22 UniRef50_B0SDD9 30S Ribosomal protein S1 n=6 Tax=Leptospira RepI... 108 5e-22 UniRef50_C4G9K7 Putative uncharacterized protein n=1 Tax=Shuttle... 108 6e-22 UniRef50_UPI00018545D5 30S ribosomal protein S1 n=2 Tax=Helicoba... 108 6e-22 UniRef50_C9NIQ1 RNA binding S1 domain protein n=2 Tax=Streptomyc... 108 8e-22 UniRef50_B4WRF0 S1 RNA binding domain protein n=1 Tax=Synechococ... 107 1e-21 UniRef50_B7FU58 Predicted protein (Fragment) n=1 Tax=Phaeodactyl... 105 4e-21 UniRef50_D2AQV7 30S ribosomal protein S1 n=5 Tax=Actinomycetales... 104 9e-21 UniRef50_P29344 30S ribosomal protein S1, chloroplastic n=21 Tax... 104 9e-21 UniRef50_B9MRX3 Hydroxymethylbutenyl pyrophosphate reductase n=1... 103 2e-20 UniRef50_C9LAT8 Ribosomal protein S1 n=10 Tax=Clostridiales RepI... 102 3e-20 UniRef50_Q5KH56 RRNA processing-related protein, putative n=2 Ta... 102 4e-20 UniRef50_B1XJQ5 30S ribosomal protein S1 like protein n=1 Tax=Sy... 102 6e-20 UniRef50_UPI0001913427 30S ribosomal protein S1 n=1 Tax=Salmonel... 101 9e-20 UniRef50_Q70DX8 Plastid ribosomal protein S1 n=6 Tax=Viridiplant... 101 9e-20 UniRef50_B8HSI0 RNA binding S1 domain protein n=1 Tax=Cyanothece... 100 1e-19 UniRef50_C6LB27 Putative S1 RNA binding domain protein n=2 Tax=C... 100 2e-19 UniRef50_C5ES10 RNA binding S1 domain-containing protein n=2 Tax... 99 3e-19 UniRef50_O33698 30S ribosomal protein S1 n=12 Tax=Cyanobacteria ... 97 2e-18 UniRef50_A2R624 Function: RRP5 is required for formation of both... 96 3e-18 UniRef50_C1N2E8 Elongation factor Ts n=2 Tax=cellular organisms ... 95 7e-18 UniRef50_A8J2S3 RNA binding protein n=1 Tax=Chlamydomonas reinha... 95 7e-18 UniRef50_Q14690 Protein RRP5 homolog n=24 Tax=Metazoa RepID=RRP5... 94 1e-17 UniRef50_A9SNI7 Predicted protein n=3 Tax=Embryophyta RepID=A9SN... 92 4e-17 UniRef50_C0DB62 Putative uncharacterized protein n=1 Tax=Clostri... 92 5e-17 UniRef50_A7SBJ3 Predicted protein n=2 Tax=Nematostella vectensis... 91 1e-16 UniRef50_C1E1D5 Predicted protein n=3 Tax=Mamiellales RepID=C1E1... 91 1e-16 UniRef50_UPI0001AEEEF1 30S ribosomal protein S1 n=1 Tax=Streptom... 90 3e-16 UniRef50_P74142 30S ribosomal protein S1 homolog B n=14 Tax=Cyan... 89 4e-16 UniRef50_P51345 30S ribosomal protein S1, chloroplastic n=2 Tax=... 89 4e-16 UniRef50_UPI0000F2B0DB PREDICTED: similar to KIAA0185 n=1 Tax=Mo... 87 1e-15 UniRef50_C1G573 rRNA biogenesis protein RRP5 n=4 Tax=Onygenales ... 86 4e-15 UniRef50_A4S384 Predicted protein n=2 Tax=Ostreococcus RepID=A4S... 85 7e-15 UniRef50_Q6BJC7 DEHA2G03410p n=4 Tax=Saccharomycetales RepID=Q6B... 85 8e-15 UniRef50_Q0PQD3 30S ribosomal protein S1 (Fragment) n=2 Tax=Endo... 85 8e-15 UniRef50_B1L330 Ribosomal protein S1 n=2 Tax=Clostridium botulin... 84 1e-14 UniRef50_B5HYS5 30S ribosomal protein S1 n=1 Tax=Streptomyces sv... 84 1e-14 UniRef50_B1MZ34 Transcriptional accessory protein n=12 Tax=Bacil... 84 2e-14 UniRef50_C5DF89 KLTH0D13156p n=2 Tax=Saccharomycetaceae RepID=C5... 84 2e-14 UniRef50_C1ECK5 Predicted protein n=1 Tax=Micromonas sp. RCC299 ... 84 2e-14 UniRef50_Q7XYL3 Ribosomal protein rpS1 n=1 Tax=Bigelowiella nata... 83 3e-14 UniRef50_Q05022 rRNA biogenesis protein RRP5 n=10 Tax=Saccharomy... 82 6e-14 UniRef50_Q31C04 SSU ribosomal protein S1P n=6 Tax=Prochlorococcu... 81 1e-13 UniRef50_C6J336 Ribosomal protein S1 n=1 Tax=Paenibacillus sp. o... 81 1e-13 UniRef50_C7RH14 RNA binding S1 domain protein n=4 Tax=Anaerococc... 81 1e-13 UniRef50_C1DZB9 Elongation factor Ts n=1 Tax=Micromonas sp. RCC2... 81 1e-13 UniRef50_C9KQS8 Protein YhgF n=1 Tax=Mitsuokella multacida DSM 2... 81 1e-13 UniRef50_B8BUB4 Predicted protein n=1 Tax=Thalassiosira pseudona... 81 1e-13 UniRef50_Q9LK47 Similarity to 30s ribosomal protein s1 n=5 Tax=M... 80 2e-13 UniRef50_B2A6S4 RNA binding S1 domain protein n=1 Tax=Natranaero... 80 2e-13 UniRef50_D1J1D7 Whole genome shotgun sequence of line PN40024, s... 80 3e-13 UniRef50_A9SPX0 Predicted protein n=2 Tax=cellular organisms Rep... 79 4e-13 UniRef50_B9WAR4 rRNA biogenesis protein, putative n=5 Tax=Saccha... 79 5e-13 UniRef50_C9SZ75 rRNA biogenesis protein RRP5 n=5 Tax=Sordariomyc... 79 5e-13 UniRef50_B8D058 RNA binding S1 domain protein n=60 Tax=cellular ... 79 6e-13 UniRef50_B2XT45 30S ribosomal protein S1 n=2 Tax=Heterosigma aka... 79 6e-13 UniRef50_UPI000194C80A PREDICTED: programmed cell death 11 n=2 T... 79 7e-13 UniRef50_A8PVH2 Putative uncharacterized protein n=1 Tax=Malasse... 78 8e-13 UniRef50_D1B1Y3 Tex-like protein protein-like protein n=2 Tax=de... 78 8e-13 UniRef50_B8PP03 Predicted protein (Fragment) n=1 Tax=Postia plac... 78 9e-13 UniRef50_Q4PGT5 Putative uncharacterized protein n=1 Tax=Ustilag... 78 1e-12 UniRef50_D1Z6Q4 Whole genome shotgun sequence assembly, scaffold... 78 1e-12 UniRef50_B0CR68 Predicted protein n=3 Tax=Agaricales RepID=B0CR6... 77 2e-12 UniRef50_O31489 Uncharacterized protein ydcI n=35 Tax=cellular o... 77 2e-12 UniRef50_D2MLP5 S1 RNA binding domain protein n=1 Tax=Bulleidia ... 77 2e-12 UniRef50_A3ZZ79 Ribosomal protein S1-like RNA-binding domain pro... 77 2e-12 UniRef50_A6C5P8 Ribosomal protein S1-like RNA-binding domain n=2... 77 2e-12 UniRef50_A9NHV1 Tex protein-related transcription accessory prot... 77 3e-12 UniRef50_C4L139 RNA binding S1 domain protein n=2 Tax=Exiguobact... 76 3e-12 UniRef50_D1ZWZ1 Whole genome shotgun sequence assembly, contig_1... 76 3e-12 UniRef50_A5GJG3 30S ribosomal protein S1 n=1 Tax=Synechococcus s... 76 4e-12 UniRef50_C1CRY7 S1 RNA binding domain protein n=174 Tax=Bacteria... 76 4e-12 UniRef50_D0LLY3 Tex-like protein protein-like protein n=9 Tax=Ba... 75 6e-12 UniRef50_C8NGU9 Histidine triad domain-containing protein n=1 Ta... 75 6e-12 UniRef50_A6NVV1 Putative uncharacterized protein n=1 Tax=Bactero... 75 7e-12 UniRef50_B1VKK5 Putative uncharacterized protein n=1 Tax=Strepto... 75 9e-12 UniRef50_Q9LHM6 Pre-rRNA processing protein RRP5 n=6 Tax=rosids ... 74 1e-11 UniRef50_D0NSW6 rRNA biogenesis protein rrp5 n=1 Tax=Phytophthor... 74 1e-11 UniRef50_C5XCN3 Putative uncharacterized protein Sb02g006000 n=1... 74 2e-11 UniRef50_O74835 rRNA biogenesis protein rrp5 n=1 Tax=Schizosacch... 74 2e-11 >UniRef50_Q48082 30S ribosomal protein S1 n=129 Tax=Proteobacteria RepID=RS1_HAEIN Length = 549 Score = 863 bits (2230), Expect = 0.0, Method: Compositional matrix adjust. Identities = 435/557 (78%), Positives = 491/557 (88%), Gaps = 8/557 (1%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL 60 M+ESFAQLFEESLK +ETR GSIV G VVAI K VLVDAGLKSESAIP +F NAQGEL Sbjct: 1 MSESFAQLFEESLKVLETRQGSIVSGTVVAIQKGFVLVDAGLKSESAIPVAEFLNAQGEL 60 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 EIQVGD V+VALDAVEDGFGET LSREKA RHE+WI LEKAYE+ TV G+I GKVKGGF Sbjct: 61 EIQVGDTVNVALDAVEDGFGETKLSREKAVRHESWIELEKAYEEKATVIGLIXGKVKGGF 120 Query: 121 TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 TVELNG+RAFLPGSLVD RP R+ HL GKELEFKVIKLDQKRNNVVVSRRAVIESENS Sbjct: 121 TVELNGVRAFLPGSLVDTRPAREADHLLGKELEFKVIKLDQKRNNVVVSRRAVIESENSQ 180 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 ER+Q+LENL EG EVKG+VKNLT+YGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE Sbjct: 181 EREQVLENLVEGSEVKGVVKNLTEYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 Query: 241 ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV 300 +TVKVLKFD++RTRVSLGLKQLG+DPW AIA+ +P +KLTG+VTNLTDYGCFVEI +GV Sbjct: 241 VTVKVLKFDKDRTRVSLGLKQLGQDPWAAIAENHPVNSKLTGKVTNLTDYGCFVEILDGV 300 Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAET 360 EGLVHVSEMDWTNKNIHPSKVV++GD VEVMVL+IDEERRRISLGLKQCKANPW QFA+T Sbjct: 301 EGLVHVSEMDWTNKNIHPSKVVSLGDTVEVMVLEIDEERRRISLGLKQCKANPWTQFADT 360 Query: 361 HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL 420 HNKGD+V GKIKSITDFGIFIGL+GGIDGLVHLSDISW+++GEEAVR+YKKGDE++AVVL Sbjct: 361 HNKGDKVTGKIKSITDFGIFIGLEGGIDGLVHLSDISWSISGEEAVRQYKKGDEVSAVVL 420 Query: 421 QVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRA 480 VDA +ERISLG+KQL EDPFNN+VA+NKKGA+V+ V DAKGA VELA GVEGY+R+ Sbjct: 421 AVDAVKERISLGIKQLEEDPFNNFVAINKKGAVVSATVVEADAKGAKVELAGGVEGYIRS 480 Query: 481 SEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDA 540 + D T ++VGD VEAK+TGVDRK+R + LSV+AKD+A+E A+A+VN +++ Sbjct: 481 A--------DLTSEVAVGDVVEAKYTGVDRKSRIVHLSVKAKDQAEEAAAVASVNNKQED 532 Query: 541 NFSNNAMAEAFKAAKGE 557 NAMAEAFKAAKGE Sbjct: 533 IVIPNAMAEAFKAAKGE 549 >UniRef50_Q89AJ3 30S ribosomal protein S1 n=296 Tax=Proteobacteria RepID=RS1_BUCBP Length = 566 Score = 813 bits (2100), Expect = 0.0, Method: Compositional matrix adjust. Identities = 402/564 (71%), Positives = 472/564 (83%), Gaps = 10/564 (1%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL 60 MTESFAQLFEESLK I+TRPGSI++G VVAI KD +LVDA LKSES IP +QFKN+QGEL Sbjct: 1 MTESFAQLFEESLKNIKTRPGSIIQGTVVAITKDTILVDAKLKSESKIPIDQFKNSQGEL 60 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 E++VGD++DVALDA+EDGFGETLLSREKAKRHEAW+TLE+AY+D++TV G+INGKVKGGF Sbjct: 61 EVKVGDQIDVALDAIEDGFGETLLSREKAKRHEAWLTLEQAYKDSKTVVGLINGKVKGGF 120 Query: 121 TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 TVEL IRAFLPGSLVD+RPVR+T+HLEGKELEFKVIKLDQKRNNVVVSRRAVIESE +A Sbjct: 121 TVELEDIRAFLPGSLVDIRPVRETMHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEYNA 180 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 ER+ LLE LQEG+ V GIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVN+GDE Sbjct: 181 ERNLLLETLQEGLIVSGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNIGDE 240 Query: 241 ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV 300 + +K+LKFDRE+ RVSLGLKQL +DPW I++RYPE TK+TGRVTNLTDYGCFVEIEEGV Sbjct: 241 VKIKILKFDREKIRVSLGLKQLSDDPWTKISERYPEKTKITGRVTNLTDYGCFVEIEEGV 300 Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAET 360 EGLVHVSEMDWTNKNIHPSK+V V VV+VM+LDIDEERRRISLGLKQCK NPW +F++ Sbjct: 301 EGLVHVSEMDWTNKNIHPSKMVQVNSVVKVMILDIDEERRRISLGLKQCKNNPWMEFSKK 360 Query: 361 HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL 420 +NKG V GKIKSITDFGIFIGL+G IDGLVHLSDISWN++GEE+V++YKKG+E+ AVVL Sbjct: 361 YNKGSHVVGKIKSITDFGIFIGLEGSIDGLVHLSDISWNISGEESVKKYKKGEEVLAVVL 420 Query: 421 QVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRA 480 QVD +RERISLG+KQL EDPF +V+ +KKG++V+G + +D V L++ ++G ++ Sbjct: 421 QVDPDRERISLGIKQLQEDPFAKYVSSHKKGSLVSGTIKKIDNNVIVVSLSEHIDGLIKF 480 Query: 481 SEASRD--RVEDATL--VLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVN- 535 S + V D +G+ VE K +D+K R I LS+ K E + I N Sbjct: 481 LNISDEIMNVHDNKPWNKAKIGEIVEVKLNSIDKKERIIYLSILEKQELKISNDIKKNNS 540 Query: 536 -KQE---DANFSNNAMAEAFKAAK 555 KQE D NFS NAM EAFKAAK Sbjct: 541 HKQEIDKDKNFS-NAMTEAFKAAK 563 >UniRef50_Q6NDP1 30S ribosomal protein S1 n=165 Tax=Proteobacteria RepID=RS1_RHOPA Length = 565 Score = 545 bits (1405), Expect = e-153, Method: Compositional matrix adjust. Identities = 265/551 (48%), Positives = 383/551 (69%), Gaps = 2/551 (0%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEI 62 + FA + +ES + S+++G VVAI+KD+ ++D GLK+E +P +F + EI Sbjct: 12 DDFAAMLDESFAGGNLQESSVIKGKVVAIEKDMAVIDVGLKTEGRVPLREFAGPGRDNEI 71 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 +VGD V+V LD +E+ GE +LSR+KA+R E+W LEKA+++ E V GVI +VKGGFTV Sbjct: 72 KVGDTVEVFLDRIENALGEAVLSRDKARREESWGKLEKAFQNNEKVFGVIFNQVKGGFTV 131 Query: 123 ELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 +L+G AFLP S VD+RP+RD L F+++K+D++R N+VVSRR V+E + +R Sbjct: 132 DLDGAVAFLPRSQVDIRPIRDVAPLMNNSQPFQILKMDRRRGNIVVSRRTVLEETRAEQR 191 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 +L++NL+EG + G+VKN+TDYGAFVDLGG+DGLLH+TD+AW+RV HP+E++ +G + Sbjct: 192 QELVQNLEEGQVIDGVVKNITDYGAFVDLGGIDGLLHVTDIAWRRVNHPTEVLTIGQTVK 251 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 VK++K + E R+SLG+KQL +DPW I +YP + TGRVTN+TDYG FVE+E G+EG Sbjct: 252 VKIIKINHETHRISLGMKQLLDDPWQGIEAKYPLNARFTGRVTNITDYGAFVELEPGIEG 311 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHN 362 L+HVSEM WT KN+HP K+V+ VEV VL++D +RRISLGLKQ NPW+ F E H Sbjct: 312 LIHVSEMSWTKKNMHPGKIVSTSQEVEVQVLEVDSVKRRISLGLKQTMRNPWEVFVEKHP 371 Query: 363 KGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQV 422 G VEG++K+ T+FG+F+GLDG +DG+VHLSD+ W + GE+ + +KKGD + AVVL V Sbjct: 372 VGSTVEGEVKNKTEFGLFLGLDGDVDGMVHLSDLDWKLPGEQVIDNFKKGDMVKAVVLDV 431 Query: 423 DAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVEL-ADGVEGYLRAS 481 D E+ERISLGVKQL DPF + KKGA+VT +V V G V++ +++ S Sbjct: 432 DVEKERISLGVKQLEGDPFAEPGDV-KKGAVVTCEVLDVKESGIDVQIVGTDFNTFIKRS 490 Query: 482 EASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDAN 541 E +RDR + + +VG++V+A+ D+K R + +S++A + A+EK+AIA + Sbjct: 491 ELARDRNDQRSDRFAVGEKVDARVIQFDKKARKVQVSIKALEVAEEKEAIAQYGSSDSGA 550 Query: 542 FSNNAMAEAFK 552 + + A K Sbjct: 551 TLGDILGTALK 561 >UniRef50_B8FI70 Ribosomal protein S1 n=14 Tax=Proteobacteria RepID=B8FI70_DESAA Length = 616 Score = 520 bits (1338), Expect = e-146, Method: Compositional matrix adjust. Identities = 270/551 (49%), Positives = 370/551 (67%), Gaps = 7/551 (1%) Query: 5 FAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQV 64 F L+EES K E G +V G ++ IDKD VLVD G KSE IP +F G + ++ Sbjct: 57 FMALYEESFKRFEE--GEVVTGKIIQIDKDYVLVDIGYKSEGLIPIREFIEPDGTVAAEI 114 Query: 65 GDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL 124 GDEV+V ++ ++ ++S+EKA + + W ++ AYE+ V G I +VKGGF+V++ Sbjct: 115 GDEVEVMVERLDSEDEGVMVSKEKASKIKVWEEIKVAYEEEGIVEGTITHRVKGGFSVDI 174 Query: 125 NGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQ 184 G+ AFLPGS VD+RPVRD + GK FKV+K ++KR+N+V+SRR ++E E +R Sbjct: 175 -GVPAFLPGSQVDLRPVRDLDSMVGKVFTFKVLKYNRKRSNIVLSRRVILEKEREEQRSS 233 Query: 185 LLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 L+N+ EG V+G+VKN+T+YG FVDLGG+DGLLHITD++W RVKHPSE+ VG ITVK Sbjct: 234 TLQNIHEGKVVEGVVKNITEYGVFVDLGGIDGLLHITDISWGRVKHPSELFGVGQTITVK 293 Query: 245 VLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLV 304 VL D ER RVSLG+KQL EDPW + RYP G +++G+V +LTDYG FVE+EEG+EGL+ Sbjct: 294 VLDLDLERERVSLGMKQLKEDPWTTASDRYPVGERVSGKVVSLTDYGAFVELEEGIEGLI 353 Query: 305 HVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKG 364 HVSEM WT K HPSKVV+VGD +E +VLDI RR+SLG+KQ NPW E + G Sbjct: 354 HVSEMSWTRKIRHPSKVVSVGDDLEAVVLDIKPSNRRVSLGMKQVAPNPWDVIGEKYPIG 413 Query: 365 DRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDA 424 +EG+IK+ITDFG+FIG+D GIDGLVH+SDISW YKKGDE+ A+VL +D Sbjct: 414 TTIEGRIKNITDFGMFIGIDEGIDGLVHISDISWTKRINHPGDVYKKGDEVRAIVLHIDR 473 Query: 425 ERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEAS 484 E ER SLG+KQL DP+ + G V G +T+V G VEL +G+EG + SE + Sbjct: 474 ENERFSLGIKQLEPDPWETISERYQVGTKVNGLITSVTDFGIFVELEEGIEGLVHVSEVA 533 Query: 485 RDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDAN-FS 543 +++V+ +VGD VE ++ K R I LS++ + E DE++ N+ +N + Sbjct: 534 KEKVKTPVGQFNVGDTVETVVVNINPKERRIGLSIK-RLEEDEQEGY--FNEYMASNKPA 590 Query: 544 NNAMAEAFKAA 554 ++A+ EAF+ A Sbjct: 591 SSALGEAFQRA 601 >UniRef50_C4XQS6 30S ribosomal protein S1 n=3 Tax=Desulfovibrio RepID=C4XQS6_DESMR Length = 576 Score = 514 bits (1325), Expect = e-144, Method: Compositional matrix adjust. Identities = 253/501 (50%), Positives = 356/501 (71%) Query: 21 GSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGFG 80 GSI GVVV I K+ VLVD KSE IP +F +A GELE++VGD++DV + + + G Sbjct: 37 GSITPGVVVRIGKEHVLVDVNFKSEGQIPVSEFMDALGELEVKVGDQIDVYVVSKNESEG 96 Query: 81 ETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRP 140 ++SRE+AKR + + LE+ E + ++G I ++KGG+TV+L G+ AFLPGS VD+RP Sbjct: 97 TIIMSRERAKRMQLFDKLEEIQEKDDVISGKIVRRIKGGYTVDLGGVEAFLPGSHVDLRP 156 Query: 141 VRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVK 200 V D L G+E EF+V+K++++R+NV+VSRR ++E + R LL+ L+EG V G VK Sbjct: 157 VPDMDALVGQEFEFRVLKINRRRSNVIVSRRVLLEERRDSMRKDLLKTLEEGQTVTGRVK 216 Query: 201 NLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLK 260 N+T+YG FVDLGG+DGL+HITDM+WKR+KHP E+V++GDE+ +KVL FD+++ +VSLG+K Sbjct: 217 NITEYGVFVDLGGLDGLMHITDMSWKRIKHPKELVHLGDELELKVLSFDQDKQKVSLGMK 276 Query: 261 QLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSK 320 QL DPW IA +YPE T+++G+VTNL DYG FVE+E GVEGLVH+SEM WT K HPS+ Sbjct: 277 QLIADPWENIAGKYPEDTRMSGKVTNLVDYGAFVELEPGVEGLVHISEMSWTRKLRHPSQ 336 Query: 321 VVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIF 380 +V+VGD VEV+VL +D +++RISLG+KQ + NPW AE + +G +EG +K+IT+FGIF Sbjct: 337 MVHVGDEVEVVVLSVDPDKKRISLGMKQVRPNPWDIVAEKYPEGTILEGSVKNITEFGIF 396 Query: 381 IGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDP 440 IG++ GIDGL+H+SDISW +K GD + A VL VD E E+ +LG+KQL+EDP Sbjct: 397 IGIEDGIDGLIHVSDISWTKKVRHPGEMFKSGDIVMAKVLTVDKENEKFTLGIKQLSEDP 456 Query: 441 FNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDE 500 + GA+V G VT + G VE+ +G+EG + SE SR +V+ + GDE Sbjct: 457 WTRVPDTYPVGAMVKGTVTNITDFGLFVEVEEGIEGLVHVSEISRKKVKTPAEIYKEGDE 516 Query: 501 VEAKFTGVDRKNRAISLSVRA 521 +EAK V R + LS+++ Sbjct: 517 IEAKVIHVSADERRLGLSIKS 537 Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 55/206 (26%), Positives = 105/206 (50%), Gaps = 10/206 (4%) Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 + VGDEV+V + +V+ L ++ R W + + Y + + G + + G Sbjct: 338 VHVGDEVEVVVLSVDPDKKRISLGMKQV-RPNPWDIVAEKYPEGTILEGSVKNITEFGIF 396 Query: 122 VEL-NGIRAFLPGSLVD-VRPVRDT--LHLEGKELEFKVIKLDQKRNNVVVSRRAVIESE 177 + + +GI + S + + VR + G + KV+ +D++ + + + SE Sbjct: 397 IGIEDGIDGLIHVSDISWTKKVRHPGEMFKSGDIVMAKVLTVDKENEKFTLGIKQL--SE 454 Query: 178 NSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVN 236 + R + + G VKG V N+TD+G FV++ G++GL+H+++++ K+VK P+EI Sbjct: 455 DPWTR--VPDTYPVGAMVKGTVTNITDFGLFVEVEEGIEGLVHVSEISRKKVKTPAEIYK 512 Query: 237 VGDEITVKVLKFDRERTRVSLGLKQL 262 GDEI KV+ + R+ L +K + Sbjct: 513 EGDEIEAKVIHVSADERRLGLSIKSI 538 >UniRef50_Q1MQB8 Ribosomal protein S1 n=2 Tax=Desulfovibrionaceae RepID=Q1MQB8_LAWIP Length = 574 Score = 492 bits (1266), Expect = e-137, Method: Compositional matrix adjust. Identities = 244/507 (48%), Positives = 349/507 (68%) Query: 21 GSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGFG 80 G+IV+G +V ID D VLVD KSE IP +F+N G + +VGD++DV + + G Sbjct: 36 GTIVKGEIVRIDDDNVLVDVNFKSEGQIPTIEFQNTDGNITAKVGDKIDVFVVRKNEQEG 95 Query: 81 ETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRP 140 +LS EKAKR + + LE E + G I ++KGG+T++L G+ AFLPGS VD+RP Sbjct: 96 TIILSFEKAKRMQLFDQLEDLQEKNGIIKGRIVRRIKGGYTIDLRGVEAFLPGSHVDLRP 155 Query: 141 VRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVK 200 V D L +E EF+V+K++++R+NV+VSRR ++E E ++R LL+ + EG V G VK Sbjct: 156 VPDMDMLVNQEYEFRVLKINRRRSNVIVSRRVLLEEERDSKRQDLLQTISEGQVVVGKVK 215 Query: 201 NLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLK 260 N+T+YG FVDLGG+DGLLHITDM+WKR++HP E+VN+G E+ +KVL FD+E +VSLGLK Sbjct: 216 NVTEYGVFVDLGGLDGLLHITDMSWKRIRHPREMVNLGQELELKVLSFDKENQKVSLGLK 275 Query: 261 QLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSK 320 QL DPW I +R+PE + G+VTNL DYG FVE+E GVEGLVH+SEM WT K HPS+ Sbjct: 276 QLVPDPWQDITERFPETSHHVGKVTNLVDYGVFVELESGVEGLVHISEMSWTRKLRHPSQ 335 Query: 321 VVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIF 380 +V+ GD VEV++L ID++++RISLG+KQ K NPW+ E + +G +EG +K+IT+FG+F Sbjct: 336 MVHQGDEVEVVILGIDQDKKRISLGMKQVKPNPWELVGEKYPEGTILEGVVKNITEFGMF 395 Query: 381 IGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDP 440 IG++ GIDGL+H+SDISW +K GD + A VL VD E E+ +LG+KQL EDP Sbjct: 396 IGIEDGIDGLIHVSDISWTKKVRHPNELFKVGDTVQAKVLTVDQENEKFTLGIKQLTEDP 455 Query: 441 FNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDE 500 ++N ++ G IV G +T + G VE+ +G+EG + SE S +++ + + G+E Sbjct: 456 WSNAPSVYPVGGIVKGIITNITDFGLFVEVEEGIEGLVHVSELSSKKIKSPSEIYKDGEE 515 Query: 501 VEAKFTGVDRKNRAISLSVRAKDEADE 527 ++AK V + R + LS++ E +E Sbjct: 516 IQAKIIHVSAEERRLGLSIKQLKEDEE 542 >UniRef50_A8ZTA2 Ribosomal protein S1 n=22 Tax=Deltaproteobacteria RepID=A8ZTA2_DESOH Length = 604 Score = 491 bits (1264), Expect = e-137, Method: Compositional matrix adjust. Identities = 245/521 (47%), Positives = 364/521 (69%), Gaps = 3/521 (0%) Query: 8 LFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDE 67 +++ + K+ G +V G V+A+DKD VLVD G KSE I +FKN +GE+ +++ D+ Sbjct: 29 MYDHTFKQF--TEGEVVVGKVIAVDKDYVLVDIGYKSEGQININEFKNEKGEVNVKIYDD 86 Query: 68 VDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGI 127 V+V ++ ++ + +LS++KA++ + W T++ +++ V+GVI +VKGGF+V++ G+ Sbjct: 87 VEVMIEFWDEEHEKLVLSKDKAEKDKIWETIKDTFDNDGVVSGVIINRVKGGFSVDV-GL 145 Query: 128 RAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLE 187 +AFLPGS D+RP+R+ + G+ +FKV+K +++RNN+V+SRR ++E + +R +L+E Sbjct: 146 QAFLPGSQADLRPIRNFDEMVGQTYDFKVLKYNRRRNNIVLSRRVLLEETLATKRAELME 205 Query: 188 NLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLK 247 L +G V+GIVKN+T+YG FVDLGG+DGLLHITD++W RV+HPSE+ VGD +T+KVL Sbjct: 206 TLADGQVVEGIVKNITEYGVFVDLGGIDGLLHITDISWGRVRHPSELFTVGDNVTLKVLS 265 Query: 248 FDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVS 307 FD ++ ++SLG+KQL DPW + A++YP G K TG+V ++T+YG FVE+EEGVEGL+HVS Sbjct: 266 FDLDKKKISLGMKQLTPDPWESAAEKYPVGVKTTGKVVSITNYGIFVELEEGVEGLIHVS 325 Query: 308 EMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRV 367 E+ WT K HPSKVVN+G+ V+ +VLDI RRISLG+KQ + NPW+ +E + G + Sbjct: 326 EISWTRKIRHPSKVVNIGEEVDAVVLDIQPGNRRISLGMKQVEPNPWEVISEKYPVGTVI 385 Query: 368 EGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERE 427 EG+IK+ITDFG+FIG+D IDGLVH+SDISW + YKKGD + AVVL++D E Sbjct: 386 EGRIKNITDFGLFIGIDDDIDGLVHISDISWTKRIKHPSEIYKKGDLVRAVVLEIDKANE 445 Query: 428 RISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDR 487 R S+G+KQL DP+ + G V+G VT V G VEL +G+EG + SE S +R Sbjct: 446 RFSMGIKQLESDPWESVRDRYPIGTKVSGVVTNVTDFGIFVELEEGIEGLVHVSEVSTER 505 Query: 488 VEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEK 528 ++ VG E+ A+ V+ R I LS++ D D+K Sbjct: 506 IKTPVGQYEVGAELTARVMNVNADERKIGLSIKRLDVEDDK 546 Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 58/91 (63%), Gaps = 1/91 (1%) Query: 192 GMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDR 250 G +V G+V N+TD+G FV+L G++GL+H+++++ +R+K P VG E+T +V+ + Sbjct: 469 GTKVSGVVTNVTDFGIFVELEEGIEGLVHVSEVSTERIKTPVGQYEVGAELTARVMNVNA 528 Query: 251 ERTRVSLGLKQLGEDPWVAIAKRYPEGTKLT 281 + ++ L +K+L + + K Y + ++ T Sbjct: 529 DERKIGLSIKRLDVEDDKTLLKDYVDNSRGT 559 >UniRef50_Q1IHI9 SSU ribosomal protein S1P n=6 Tax=Bacteria RepID=Q1IHI9_ACIBL Length = 609 Score = 488 bits (1256), Expect = e-136, Method: Compositional matrix adjust. Identities = 249/524 (47%), Positives = 352/524 (67%), Gaps = 5/524 (0%) Query: 1 MTESFA---QLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ 57 MTE FA + FE+ E ++ G V++I V+VD GLKSE +P E+ K+ Sbjct: 50 MTEDFATALESFEQEQSEQALNEDRVLVGRVLSITPQYVVVDVGLKSEGVVPIEEVKDHD 109 Query: 58 GELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVK 117 G + Q G+E+ V + G LS +KA+R +AW +EKAY D ++ ++K Sbjct: 110 GNVSFQPGEEIAVMQEKGHTEEGYVHLSHQKAQRLKAWDEIEKAYNDKSSIKARAIDRIK 169 Query: 118 GGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESE 177 GG TV++ G RAFLPGS VD+RPVR+ L+G ELE ++IKL++KR N+VVSR+ ++E E Sbjct: 170 GGLTVDIMGARAFLPGSQVDLRPVRNLDALKGHELEVRIIKLNKKRGNIVVSRKQILEEE 229 Query: 178 NSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNV 237 + ++ + LE+L E + G VKNLTDYGAFVDLGG+DGLLHITDM+W R+ HP ++V V Sbjct: 230 QNDKKSKTLEHLNEDAVLTGTVKNLTDYGAFVDLGGIDGLLHITDMSWGRLTHPRDLVQV 289 Query: 238 GDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE 297 GD+I VKVLKFDR++ RVSLG KQL DPW+ ++RYP G ++ GRV ++TDYG F+E+E Sbjct: 290 GDQIQVKVLKFDRDKQRVSLGFKQLTPDPWLDASERYPIGARVHGRVISVTDYGAFIELE 349 Query: 298 EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQF 357 +G+EGLVHVSEM W+ + HPSK+VNVGD V+ +VL+++ + RRISLGLKQ + NPW+ Sbjct: 350 QGIEGLVHVSEMTWSKRMKHPSKIVNVGDQVDAVVLNVNPQERRISLGLKQLETNPWESL 409 Query: 358 AETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAA 417 E G VEGK++++TDFG FI ++ GIDGLVH+S++SW + KKGD++ A Sbjct: 410 HEKFPVGGVVEGKVRNLTDFGAFIEIEDGIDGLVHVSNLSWTKRVKHPSEVLKKGDKVKA 469 Query: 418 VVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGY 477 VVL ++ + R+SLGVKQL D + + ++ G I+ GKV + + GA +E+ADGVEG Sbjct: 470 VVLAIEPDNRRLSLGVKQLQPDVWETFFETHRVGDIIHGKVLRLASFGAFIEIADGVEGL 529 Query: 478 LRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRA 521 SEAS + A L L G E + K ++ + + LS+RA Sbjct: 530 CHNSEASDEH--GAPLKLEPGQEFDFKIIKMNPDEKKVGLSLRA 571 >UniRef50_D0LJ72 Ribosomal protein S1 n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LJ72_HALO1 Length = 608 Score = 481 bits (1238), Expect = e-134, Method: Compositional matrix adjust. Identities = 258/529 (48%), Positives = 362/529 (68%), Gaps = 4/529 (0%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEI 62 ESFA LFEESL + E + G I++G V+++ KD +VD G KSE I ++F+ A G + + Sbjct: 13 ESFAALFEESLNQEEVKEGDILQGTVISVGKDYAIVDIGYKSEGQIAIDEFRQADGGILV 72 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 GD +DV L++ E+ G +LS+EKA R + W + A E E + G I +VKGG +V Sbjct: 73 TPGDVIDVLLESRENEAGMCVLSKEKADRFKVWDEISAACERDELIEGTITQRVKGGLSV 132 Query: 123 EL-NGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 + G++AFLPGS VD+RPVR+ G+ +FKVIK ++KR N+V+SRR ++E E +A Sbjct: 133 TIRGGVKAFLPGSQVDLRPVRNLDAFIGQSYKFKVIKFNKKRGNIVLSRRVLLEKERAAL 192 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEI 241 ++ LE L+EG EV+GIVKNLT+YGAF+DLGG+DGLLHITDM+W RV HPSE+ VGD + Sbjct: 193 KESTLERLKEGQEVEGIVKNLTEYGAFIDLGGIDGLLHITDMSWGRVNHPSELFQVGDHV 252 Query: 242 TVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVE 301 VKVLKF+ + RVSLGLKQ+ EDPW ++Y GT + G+V +L DYG F+E+EEG+E Sbjct: 253 RVKVLKFNADTERVSLGLKQISEDPWSKAQEKYIPGTVVRGKVVSLKDYGAFIELEEGIE 312 Query: 302 GLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETH 361 GLVH+SEM WT + HPSK+V VGDVV+ +VLD+D + RISLG+KQ + NP++Q E + Sbjct: 313 GLVHISEMSWTRRVKHPSKMVAVGDVVDAVVLDVDVKNNRISLGMKQLEPNPYEQLNEKY 372 Query: 362 NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQ 421 G V+GK+++I DFGIF+ ++ GIDGLVH+SD+SW + ++KGDE+ AV+L Sbjct: 373 PPGTVVKGKVRNIADFGIFVEIEEGIDGLVHVSDMSWTQRVKHPSEMFQKGDEVEAVLLN 432 Query: 422 V---DAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYL 478 + D E+ +ISLG+KQL DP++ G IV KV V GA VE+ G+EG + Sbjct: 433 IDTADGEKPKISLGIKQLNTDPWDRIPFDFPPGKIVDAKVLKVLDFGAFVEIEKGIEGLV 492 Query: 479 RASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADE 527 SE S + V+D VL+ G E++ + VD + R I LSV++ + A E Sbjct: 493 HVSEISDEHVDDPRKVLTPGQELKVQILSVDPQERKIGLSVKSANRATE 541 Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 78/185 (42%), Positives = 119/185 (64%), Gaps = 10/185 (5%) Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAW-KRVKHPSEIVNVGDE 240 +QL E G VKG V+N+ D+G FV++ G+DGL+H++DM+W +RVKHPSE+ GDE Sbjct: 366 EQLNEKYPPGTVVKGKVRNIADFGIFVEIEEGIDGLVHVSDMSWTQRVKHPSEMFQKGDE 425 Query: 241 ITVKVLKFDR---ERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE 297 + +L D E+ ++SLG+KQL DPW I +P G + +V + D+G FVEIE Sbjct: 426 VEAVLLNIDTADGEKPKISLGIKQLNTDPWDRIPFDFPPGKIVDAKVLKVLDFGAFVEIE 485 Query: 298 EGVEGLVHVSEMDWTNKNIH-PSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQ 356 +G+EGLVHVSE+ +++++ P KV+ G ++V +L +D + R+I L +K AN + Sbjct: 486 KGIEGLVHVSEI--SDEHVDDPRKVLTPGQELKVQILSVDPQERKIGLSVKS--ANRATE 541 Query: 357 FAETH 361 AE Sbjct: 542 MAEAQ 546 Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 33/124 (26%), Positives = 63/124 (50%), Gaps = 4/124 (3%) Query: 174 IESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPS 232 I+ N+ D++ + G V V + D+GAFV++ G++GL+H+++++ + V P Sbjct: 447 IKQLNTDPWDRIPFDFPPGKIVDAKVLKVLDFGAFVEIEKGIEGLVHVSEISDEHVDDPR 506 Query: 233 EIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRY---PEGTKLTGRVTNLTD 289 +++ G E+ V++L D + ++ L +K +A A+ Y GT G V Sbjct: 507 KVLTPGQELKVQILSVDPQERKIGLSVKSANRATEMAEAQGYNSPTAGTATLGDVMRAQL 566 Query: 290 YGCF 293 G F Sbjct: 567 AGAF 570 >UniRef50_C1FAB9 Ribosomal protein S1 n=2 Tax=Bacteria RepID=C1FAB9_ACIC5 Length = 637 Score = 474 bits (1220), Expect = e-132, Method: Compositional matrix adjust. Identities = 241/499 (48%), Positives = 342/499 (68%), Gaps = 4/499 (0%) Query: 23 IVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGFGET 82 +V G V+ + V+VD GLKSE IP +Q + + ++Q GD V+V ++ E+ G Sbjct: 108 VVNGTVIKLTDKHVVVDVGLKSEGLIPLDQVLDHNQQPKVQPGDTVEVVIER-EEAEGGF 166 Query: 83 LLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVR 142 LLS EKA R W T+EKA + VTG++ G+VKGG TV++ GI+AFLPGS +++RPVR Sbjct: 167 LLSYEKALRLRVWDTIEKAANEKTPVTGIVAGRVKGGLTVDI-GIKAFLPGSQLEIRPVR 225 Query: 143 DTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNL 202 + G+ +E +VIKL++KR NVVVSR+ ++E E +A+R + LE+L+EG + G VKNL Sbjct: 226 NLDAYIGQPIEVRVIKLNKKRGNVVVSRKEILEEEQTAKRSETLEHLEEGSILTGTVKNL 285 Query: 203 TDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQL 262 TDYGAFVD+GG+DGLLHITDM+W R+ HP ++VNVGDEI VKVLKFDR++ RVSLG KQL Sbjct: 286 TDYGAFVDMGGIDGLLHITDMSWGRLTHPRDLVNVGDEIQVKVLKFDRDKQRVSLGFKQL 345 Query: 263 GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVV 322 DPW+ +RYP G ++ GRV ++TDYG FVE+E+G+EGLVHVSEM W+ + HPSK++ Sbjct: 346 TPDPWLDATERYPVGARVRGRVLSVTDYGSFVELEQGIEGLVHVSEMTWSKRMKHPSKML 405 Query: 323 NVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIG 382 GD VE +VL ++ RRISLG+KQ + NPW+ + + G VEG+++++TDFG FI Sbjct: 406 KPGDEVETVVLSVNPTDRRISLGMKQLQDNPWETLGDKYPTGATVEGRVRNLTDFGAFIE 465 Query: 383 LDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFN 442 ++ GIDGLVH+S++SW + KKG+++ AVVL V+ E R+SLG+KQL D + Sbjct: 466 IEDGIDGLVHVSNLSWTKRVKHPSEVLKKGEKVRAVVLGVEPENRRLSLGIKQLQPDVWE 525 Query: 443 NWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVE 502 + ++ G +V GKV GA +E+A+GVEG SEA+ A + L G E + Sbjct: 526 TFFEQHRTGDVVHGKVLRTAQFGAFIEIAEGVEGLCHVSEATDQH--GAPVNLEQGQEYD 583 Query: 503 AKFTGVDRKNRAISLSVRA 521 K ++ + + LS+RA Sbjct: 584 FKIIKMNPDEKKVGLSLRA 602 >UniRef50_B3E440 Ribosomal protein S1 n=3 Tax=Deltaproteobacteria RepID=B3E440_GEOLS Length = 573 Score = 470 bits (1209), Expect = e-131, Method: Compositional matrix adjust. Identities = 252/522 (48%), Positives = 346/522 (66%), Gaps = 7/522 (1%) Query: 2 TESFAQLFEESLKEIETRP--GSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE 59 + FA+LF SLKE E RP I+ G VV +D D VLVD G KSE +P +F++A+G Sbjct: 20 SNEFAELFSASLKEQE-RPERDKILEGTVVRVDPDTVLVDVGRKSEGFVPISEFRDAEGN 78 Query: 60 LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGG 119 + + VGD+V V V G S+++A + AW T+ +A + + G I K GG Sbjct: 79 VSVSVGDKVKV----VSSRDGGNKFSKKRADQMAAWETIHEAGGEGAVLEGTIIAKTNGG 134 Query: 120 FTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 FTV + GI AFLP S VD RP + G +FKVI L+QKR N+V+SRRA++E E + Sbjct: 135 FTVAIGGINAFLPASQVDTRPSGNGDAYIGVAGQFKVISLNQKRGNIVLSRRALLEEERA 194 Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGD 239 R LE L EG ++G+VKNLT+YGAFVDLGGVDGLLH+TD++W RV P++++ G Sbjct: 195 ESRKATLEKLSEGQIMQGVVKNLTEYGAFVDLGGVDGLLHVTDISWGRVGKPADVLKPGQ 254 Query: 240 EITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEG 299 E+ VK+LKFDRE+ +VS+G+KQ DPW IA R+PEGT+++G+V +L DYG F+E+E G Sbjct: 255 EVNVKILKFDREKGKVSVGIKQTLPDPWQDIANRFPEGTRVSGKVVSLMDYGAFIELESG 314 Query: 300 VEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAE 359 +EGLVHVSEM WT + + ++NVGD V+V+VL +D + R+ISLGLKQ NPWQ AE Sbjct: 315 IEGLVHVSEMSWTKRVRKAADMLNVGDQVDVVVLGVDLQNRKISLGLKQVNDNPWQSIAE 374 Query: 360 THNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVV 419 + G ++EG+IK++TDFG+FIG++ GIDGLVH+SDISW + Y KGD + AVV Sbjct: 375 RYPVGTKLEGQIKNMTDFGMFIGIEEGIDGLVHVSDISWTKRVKHPGDVYSKGDLVQAVV 434 Query: 420 LQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLR 479 L+VD + ER+SLG+KQL DP++ G + GKV + G VE+ +G+EG + Sbjct: 435 LKVDPQNERVSLGIKQLTPDPWSLVPQKYAPGTRLVGKVASTTDFGVFVEIEEGIEGLIH 494 Query: 480 ASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRA 521 SE SR++V A VGD +EA D + R ISLSV++ Sbjct: 495 VSELSREKVPSAKDFAIVGDSIEAVVLNADSRERRISLSVKS 536 >UniRef50_B6AR90 Ribosomal protein S1 n=1 Tax=Leptospirillum sp. Group II '5-way CG' RepID=B6AR90_9BACT Length = 591 Score = 466 bits (1200), Expect = e-130, Method: Compositional matrix adjust. Identities = 245/554 (44%), Positives = 359/554 (64%), Gaps = 8/554 (1%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEI 62 E +L+ ++L+ ++ GS+V G V+ I + V+VD G KSE I +F + + + Sbjct: 31 EEMDRLYADTLRNLDE--GSVVEGRVIEIYPNEVVVDIGYKSEGHISKSEFSEEEIQ-AL 87 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 +V D + V L+ ED G +LS+EKA R + W +E+ + ++ + G I ++KGG TV Sbjct: 88 KVDDIIHVYLEEREDVNGNLVLSKEKADRMKVWDAIEEQFNRSDVIEGRIISRIKGGMTV 147 Query: 123 ELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 ++ G++AFLPGS +D+RPVRD L G+ ++ ++IK+++KR N++VSRR ++E + Sbjct: 148 DV-GLKAFLPGSQIDLRPVRDMDRLIGQTIQVRIIKMNKKRGNIIVSRRVLLEEWRDRRK 206 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 ++ L+EG ++GIVKN+TDYGAF+DLGG+DGLLHITDM+W RV +P E +NVGD++ Sbjct: 207 KVTMDALKEGEILEGIVKNITDYGAFIDLGGIDGLLHITDMSWGRVTNPQEFMNVGDKVN 266 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 V VLK D+E RVSLGLKQL DPW + RYPEGT++ RV ++TDYG F+EIE G+EG Sbjct: 267 VVVLKHDKETGRVSLGLKQLTPDPWTTVGTRYPEGTRVNARVVSITDYGAFLEIEPGIEG 326 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHN 362 L+HV+EM W ++ HPSK+++VGD +EV VL IDE+ R+ISLGLKQ NPW + Sbjct: 327 LMHVTEMSWNHEVKHPSKIMSVGDTIEVQVLKIDEKNRKISLGLKQLGPNPWDDVETKYP 386 Query: 363 KGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQV 422 G V GKIKS+TDFG F+GLD GIDGL+H+SD+SW +KKG ++ VVL++ Sbjct: 387 VGAVVSGKIKSLTDFGAFVGLDEGIDGLIHISDMSWTKHVRHPSEVFKKGQKVEVVVLKI 446 Query: 423 DAERERISLGVKQLAEDPFNNWVALN-KKGAIVTGKVTAVDAKGATVELADGVEGYLRAS 481 + ER+R+SLG KQ++EDP+++ + G+ + G VT V G VELA+G+EG + S Sbjct: 447 EKERQRLSLGFKQVSEDPWDSDIPSRFPVGSFLDGVVTKVMDFGFFVELAEGIEGLVHVS 506 Query: 482 EASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDAN 541 E + + V G + + +D R I LS++A +A VN Q Sbjct: 507 EVDLESGQRLDQVYQPGMSLPVRVIKLDPAERKIGLSMKAVSADSPLEAAPAVNAQP--- 563 Query: 542 FSNNAMAEAFKAAK 555 NAM EA K+A+ Sbjct: 564 APGNAMEEALKSAR 577 >UniRef50_Q1RJH1 30S ribosomal protein S1 n=16 Tax=Alphaproteobacteria RepID=RS1_RICBR Length = 572 Score = 457 bits (1176), Expect = e-127, Method: Compositional matrix adjust. Identities = 236/554 (42%), Positives = 355/554 (64%), Gaps = 5/554 (0%) Query: 5 FAQLFEESLKEIET---RPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE 61 F F + L+ ++T +PG++V+G VV +VV+VD GLK+E IP +F + Sbjct: 20 FEDDFSKMLETVDTSHIKPGTVVKGQVVD-INEVVVVDVGLKNEGRIPKSEFLLSPAHKL 78 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 ++GD VDV ++ E G+TL SREKA + E W LE E V G I G+VKGGFT Sbjct: 79 PEIGDLVDVYIEKTEGHSGKTL-SREKAIKEELWGQLELICSKGEFVDGTIFGRVKGGFT 137 Query: 122 VELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 V+L+G+ AFLPGS VDVRP++D + FK++ +D+K N+VVSRRA++E S Sbjct: 138 VDLSGVVAFLPGSQVDVRPIKDPSSIMNIRQPFKILSMDKKLGNIVVSRRAILEESRSEA 197 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEI 241 RD++L ++EGM ++G VKN+TDYGAF+DLG VDGLLH+TD++W RV HPSE++ ++ Sbjct: 198 RDEMLSKIKEGMILEGTVKNITDYGAFIDLGSVDGLLHLTDISWARVNHPSEVLEFNQKV 257 Query: 242 TVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVE 301 V V+KF+ E R+SLG+KQL +PW I + +P G K+TG+VTN DYG F+E+++G+E Sbjct: 258 KVMVIKFNEETKRISLGMKQLDYNPWEKIKEEFPVGKKMTGKVTNFADYGVFIELKDGLE 317 Query: 302 GLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETH 361 GLVH SE+ W N +P K + +G VE MVL++D E+ R+SL +KQC+ NP +FAET+ Sbjct: 318 GLVHSSEISWLKSNQNPRKTLTIGQEVEFMVLEVDTEKHRVSLSIKQCQQNPLIKFAETN 377 Query: 362 NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQ 421 G ++ I++ITDFGIF+ L +DG++H DI+W G E ++ YKKGDE+ VL Sbjct: 378 PVGTVIKAPIRNITDFGIFVALSDNLDGMIHEGDITWEDNGNELLKTYKKGDEVECKVLT 437 Query: 422 VDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRAS 481 ++ E+E+ISLG+KQL +P+ KKG +V VTA+ G V + D G+++ S Sbjct: 438 INIEKEQISLGIKQLTPNPYQGIADEYKKGTVVKAVVTAIKDDGLEVLVNDKAAGFIKKS 497 Query: 482 EASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDAN 541 + S ++ E + +V E+EAK +++ I LS++A A+ + A+ ++ Sbjct: 498 DLSDEKEEQKPEMFAVDQEIEAKVASIEKSTNKILLSIKAYKIAERQKALKEYGSSDNTT 557 Query: 542 FSNNAMAEAFKAAK 555 + +A A + +K Sbjct: 558 NMGDILANALEDSK 571 >UniRef50_Q9Z8M3 30S ribosomal protein S1 n=18 Tax=Chlamydiae/Verrucomicrobia group RepID=RS1_CHLPN Length = 580 Score = 446 bits (1148), Expect = e-124, Method: Compositional matrix adjust. Identities = 226/504 (44%), Positives = 334/504 (66%), Gaps = 3/504 (0%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVE 76 E +PG+I++G VV I+KD V+VD GLKSE IP +F ++ L +G EV+V LD E Sbjct: 48 EIQPGAILKGTVVDINKDFVVVDVGLKSEGVIPMSEFIDSSEGL--VLGAEVEVYLDQAE 105 Query: 77 DGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLV 136 D G+ +LSREKA R W + E+ V G I KVKGG V++ G+ AFLPGS + Sbjct: 106 DEEGKVVLSREKATRQRQWEYILAHCEEGSIVKGQITRKVKGGLIVDI-GMEAFLPGSQI 164 Query: 137 DVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVK 196 D + +++ GK EFK++K++ +R N+VVSRR ++E+E +++ +L+E + G K Sbjct: 165 DNKKIKNLDDYVGKVCEFKILKINVERRNIVVSRRELLEAERISKKAELIEQISIGEYRK 224 Query: 197 GIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVS 256 G+VKN+TD+G F+DL G+DGLLHITDM WKR++HPSE+V + E+ V +L D+E+ RV+ Sbjct: 225 GVVKNITDFGVFLDLDGIDGLLHITDMTWKRIRHPSEMVELNQELEVIILSVDKEKGRVA 284 Query: 257 LGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNI 316 LGLKQ +PW I K+YP G ++ G++ L YG F+EIEEG+EGL+H+SEM W + Sbjct: 285 LGLKQKEHNPWEDIEKKYPPGKRVLGKIVKLLPYGAFIEIEEGIEGLIHISEMSWVKNIV 344 Query: 317 HPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITD 376 PS+VVN GD VE +VL I ++ +ISLGLKQ + NPW E + G V +IK++T+ Sbjct: 345 DPSEVVNKGDEVEAIVLSIQKDEGKISLGLKQTERNPWDNIEEKYPIGLHVNAEIKNLTN 404 Query: 377 FGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQL 436 +G F+ L+ GI+GL+H+SD+SW +KKG+ + AV+L VD E ++I+LGVKQL Sbjct: 405 YGAFVELEPGIEGLIHISDMSWIKKVSHPSELFKKGNSVEAVILSVDKESKKITLGVKQL 464 Query: 437 AEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLS 496 + +P+N A+ G +++G VT + A GA VEL +G+EG + SE S ++S Sbjct: 465 SSNPWNEIEAMFPAGTVISGVVTKITAFGAFVELQNGIEGLIHVSELSDKPFAKIEDIIS 524 Query: 497 VGDEVEAKFTGVDRKNRAISLSVR 520 +G+ V AK +D ++ +SLSV+ Sbjct: 525 IGENVSAKVIKLDPDHKKVSLSVK 548 >UniRef50_D1N749 Ribosomal protein S1 n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N749_9BACT Length = 607 Score = 443 bits (1140), Expect = e-123, Method: Compositional matrix adjust. Identities = 231/521 (44%), Positives = 333/521 (63%), Gaps = 3/521 (0%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL 60 + S +L + S G IV G +VA D LVD G K+E +PA +F Sbjct: 45 IPSSMDELLQSSESTNAFTKGKIVEGKIVAKRPDGALVDIGYKAEGFVPASEFLKFD--- 101 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 E +GD++DV L+ +E+ +S EKA +AW + Y + V G + +VKGG Sbjct: 102 EANIGDKIDVYLEEIENRNNMPEISLEKAYSIKAWNRITTEYGEGHVVKGFMRHRVKGGI 161 Query: 121 TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 V++ G AFLPGS +DV PV + GKE + K+IK++ R N+VVSRR ++E Sbjct: 162 MVDVEGFPAFLPGSQLDVGPVHNMDDYIGKEFDVKIIKINLDRRNIVVSRRELLEETLKD 221 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 +R +LL ++ KG+VKN+TD+GAF+DLGGVDGLLHITD++W R+ HPSE++ VG+E Sbjct: 222 QRSKLLGEMKVDELRKGVVKNITDFGAFIDLGGVDGLLHITDISWGRISHPSEVLKVGEE 281 Query: 241 ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV 300 I V ++ D+E+ RVSLGLKQ +PW + +YP+G+K+ G+V N+ YG FVEIE GV Sbjct: 282 IEVVIIGIDKEKERVSLGLKQKTRNPWDDVVSKYPKGSKINGKVVNIMPYGAFVEIETGV 341 Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAET 360 EGL+HVSEM WT + S V+++G+ VE +VLDID + R+ISLGL+Q + NPW+ AE Sbjct: 342 EGLIHVSEMSWTKRVSKASDVLSIGEEVEAVVLDIDRDSRKISLGLRQKERNPWEVLAEK 401 Query: 361 HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL 420 + G R+ GK++++T +G F+ ++ IDG++H+SD+SW K G E+ A++L Sbjct: 402 YPVGRRITGKVRNMTSYGAFVEIENDIDGMIHVSDMSWTRKINNPNEVLKPGQEVEAIIL 461 Query: 421 QVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRA 480 ++ E++RISLG+KQ DP+ N L K G +V GKVT + A GA VEL + ++G + Sbjct: 462 DINPEQQRISLGLKQAETDPWANINDLYKVGDVVKGKVTKIAAFGAFVELTNKIDGLIHI 521 Query: 481 SEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRA 521 S+ SRDRVE VL+VGDEVEA+ VD R I LS++A Sbjct: 522 SQLSRDRVEKVKDVLNVGDEVEARVIKVDTDERRIGLSIKA 562 Score = 224 bits (571), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 123/337 (36%), Positives = 208/337 (61%), Gaps = 15/337 (4%) Query: 110 GVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLE----GKELEFKVIKLDQKRNN 165 GV+ G ++L G+ L + D+ R + E G+E+E +I +D+++ Sbjct: 238 GVVKNITDFGAFIDLGGVDGLL--HITDISWGRISHPSEVLKVGEEIEVVIIGIDKEKER 295 Query: 166 VVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMA 224 V + ++ + D ++ +G ++ G V N+ YGAFV++ GV+GL+H+++M+ Sbjct: 296 VSLG----LKQKTRNPWDDVVSKYPKGSKINGKVVNIMPYGAFVEIETGVEGLIHVSEMS 351 Query: 225 W-KRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGR 283 W KRV S+++++G+E+ VL DR+ ++SLGL+Q +PW +A++YP G ++TG+ Sbjct: 352 WTKRVSKASDVLSIGEEVEAVVLDIDRDSRKISLGLRQKERNPWEVLAEKYPVGRRITGK 411 Query: 284 VTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRIS 343 V N+T YG FVEIE ++G++HVS+M WT K +P++V+ G VE ++LDI+ E++RIS Sbjct: 412 VRNMTSYGAFVEIENDIDGMIHVSDMSWTRKINNPNEVLKPGQEVEAIILDINPEQQRIS 471 Query: 344 LGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGE 403 LGLKQ + +PW + + GD V+GK+ I FG F+ L IDGL+H+S +S + Sbjct: 472 LGLKQAETDPWANINDLYKVGDVVKGKVTKIAAFGAFVELTNKIDGLIHISQLSRDRV-- 529 Query: 404 EAVRE-YKKGDEIAAVVLQVDAERERISLGVKQLAED 439 E V++ GDE+ A V++VD + RI L +K + E+ Sbjct: 530 EKVKDVLNVGDEVEARVIKVDTDERRIGLSIKAVGEN 566 Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 93/302 (30%), Positives = 155/302 (51%), Gaps = 22/302 (7%) Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTG-VINGKVKGGF 120 ++VG+E++V + + D E + K K W + Y + G V+N G F Sbjct: 276 LKVGEEIEVVIIGI-DKEKERVSLGLKQKTRNPWDDVVSKYPKGSKINGKVVNIMPYGAF 334 Query: 121 TVELNGIRAFLPGSLVD----VRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIES 176 G+ + S + V D L + G+E+E V+ +D+ + + R Sbjct: 335 VEIETGVEGLIHVSEMSWTKRVSKASDVLSI-GEEVEAVVLDIDRDSRKISLGLR----- 388 Query: 177 ENSAERDQ---LLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKR-VKHP 231 ER+ L E G + G V+N+T YGAFV++ +DG++H++DM+W R + +P Sbjct: 389 --QKERNPWEVLAEKYPVGRRITGKVRNMTSYGAFVEIENDIDGMIHVSDMSWTRKINNP 446 Query: 232 SEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYG 291 +E++ G E+ +L + E+ R+SLGLKQ DPW I Y G + G+VT + +G Sbjct: 447 NEVLKPGQEVEAIILDINPEQQRISLGLKQAETDPWANINDLYKVGDVVKGKVTKIAAFG 506 Query: 292 CFVEIEEGVEGLVHVSEMDWTNKNIHPSK-VVNVGDVVEVMVLDIDEERRRISLGLKQCK 350 FVE+ ++GL+H+S++ + + K V+NVGD VE V+ +D + RRI L +K Sbjct: 507 AFVELTNKIDGLIHISQL--SRDRVEKVKDVLNVGDEVEARVIKVDTDERRIGLSIKAVG 564 Query: 351 AN 352 N Sbjct: 565 EN 566 Score = 55.1 bits (131), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 59/273 (21%), Positives = 119/273 (43%), Gaps = 17/273 (6%) Query: 274 YPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVL 333 + +G + G++ G V+I EG V SE ++ N+GD ++V + Sbjct: 62 FTKGKIVEGKIVAKRPDGALVDIGYKAEGFVPASEFLKFDE-------ANIGDKIDVYLE 114 Query: 334 DIDEERRRISLGLKQCKA-NPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVH 392 +I+ + L++ + W + + +G V+G ++ GI + ++G Sbjct: 115 EIENRNNMPEISLEKAYSIKAWNRITTEYGEGHVVKGFMRHRVKGGIMVDVEGF---PAF 171 Query: 393 LSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAE----DPFNNWVALN 448 L +V + +Y G E +++++ +R I + ++L E D + + Sbjct: 172 LPGSQLDVGPVHNMDDYI-GKEFDVKIIKINLDRRNIVVSRRELLEETLKDQRSKLLGEM 230 Query: 449 KKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGV 508 K + G V + GA ++L GV+G L ++ S R+ + VL VG+E+E G+ Sbjct: 231 KVDELRKGVVKNITDFGAFIDLG-GVDGLLHITDISWGRISHPSEVLKVGEEIEVVIIGI 289 Query: 509 DRKNRAISLSVRAKDEADEKDAIATVNKQEDAN 541 D++ +SL ++ K D ++ K N Sbjct: 290 DKEKERVSLGLKQKTRNPWDDVVSKYPKGSKIN 322 >UniRef50_C9RMY1 Ribosomal protein S1 n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RMY1_FIBSS Length = 590 Score = 440 bits (1131), Expect = e-122, Method: Compositional matrix adjust. Identities = 224/499 (44%), Positives = 327/499 (65%), Gaps = 3/499 (0%) Query: 21 GSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGFG 80 G +V G + ++ VLVD KSE I +FK+ +++G E++V ++ +ED G Sbjct: 44 GKLVTGKISQVNDQEVLVDVNYKSEGVIDRAEFKDTDS---LELGSEIEVFVEKLEDEDG 100 Query: 81 ETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRP 140 +LS++KA W + A+E+ E V G + ++KGG V+L GI AFLPGS +D+R Sbjct: 101 RLILSKQKADFVRVWDRIHAAFENNEVVRGTLTKRIKGGVVVDLFGIDAFLPGSQIDLRQ 160 Query: 141 VRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVK 200 + D L G+E + KVIK+++ R N+VVSRR V+E E + +R +LE L++ KGIVK Sbjct: 161 IPDINALIGQEFDLKVIKVNKARRNIVVSRRVVLEEERNKQRGDVLETLEKNQVRKGIVK 220 Query: 201 NLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLK 260 N+TD+GAF+DLGGVDGLLHITDM++KR+ HPSE++ +G E+ V VL F+ ++ R+SLG+K Sbjct: 221 NITDFGAFIDLGGVDGLLHITDMSYKRINHPSEMLQLGQEVEVMVLDFNDKKERISLGMK 280 Query: 261 QLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSK 320 QL PW IA+RYPEG + G+V ++TDYG FVE++ GVEGL+HVSEM WT HPSK Sbjct: 281 QLKPHPWKDIAERYPEGAIVKGKVVSITDYGAFVELDSGVEGLIHVSEMSWTQHVKHPSK 340 Query: 321 VVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIF 380 ++ VG VE +VL ++E+ RISLG+KQ +++PW G RV G+I++I FG F Sbjct: 341 ILTVGQEVEAVVLKVEEDAERISLGMKQLESDPWDSIETELPPGARVVGEIRNIASFGAF 400 Query: 381 IGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDP 440 + + G+DGL+H+SD+SW KKGD++ VVL VD E+ RISL +K L EDP Sbjct: 401 VEIKEGVDGLIHVSDMSWTKKITHPNEMVKKGDKVECVVLAVDKEKRRISLSMKHLTEDP 460 Query: 441 FNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDE 500 +++ + + V GK+ + +G VELADG+EG++ S+ + + ++ VGDE Sbjct: 461 WDSIDSTYPVDSEVKGKIVRMLDRGVVVELADGIEGFIPVSKLTAEYIKVPADAFKVGDE 520 Query: 501 VEAKFTGVDRKNRAISLSV 519 V A T +D+ NR I LSV Sbjct: 521 VPAVVTEIDQNNRKIYLSV 539 Score = 43.1 bits (100), Expect = 0.029, Method: Compositional matrix adjust. Identities = 56/251 (22%), Positives = 109/251 (43%), Gaps = 19/251 (7%) Query: 276 EGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDI 335 +G +TG+++ + D V++ EG++ +E T+ + +G +EV V + Sbjct: 43 QGKLVTGKISQVNDQEVLVDVNYKSEGVIDRAEFKDTDS-------LELGSEIEVFVEKL 95 Query: 336 DEERRRISLGLKQCK-ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLS 394 ++E R+ L ++ W + + V G + G+ + L GID + S Sbjct: 96 EDEDGRLILSKQKADFVRVWDRIHAAFENNEVVRGTLTKRIKGGVVVDL-FGIDAFLPGS 154 Query: 395 DISW-NVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFN----NWVALNK 449 I + A+ G E V++V+ R I + + + E+ N + + + Sbjct: 155 QIDLRQIPDINAL----IGQEFDLKVIKVNKARRNIVVSRRVVLEEERNKQRGDVLETLE 210 Query: 450 KGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVD 509 K + G V + GA ++L GV+G L ++ S R+ + +L +G EVE + Sbjct: 211 KNQVRKGIVKNITDFGAFIDLG-GVDGLLHITDMSYKRINHPSEMLQLGQEVEVMVLDFN 269 Query: 510 RKNRAISLSVR 520 K ISL ++ Sbjct: 270 DKKERISLGMK 280 >UniRef50_C1A406 30S ribosomal protein S1 n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A406_GEMAT Length = 585 Score = 436 bits (1122), Expect = e-121, Method: Compositional matrix adjust. Identities = 214/480 (44%), Positives = 324/480 (67%), Gaps = 5/480 (1%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEI 62 E +L+ +L IE G IV+ V+ I +++V++D G KSE IP E+FK+ ++ Sbjct: 47 ERMLELYNGTLASIEE--GEIVKAHVLEIRENLVVLDIGFKSEGTIPLEEFKDMP---DL 101 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 + GDEV+V L+ +ED G +LS++KA W + AYE + V G + K+KGG V Sbjct: 102 KAGDEVEVLLEHLEDQEGSVVLSKKKADFMRVWERIRVAYESDQPVEGTLVKKIKGGVVV 161 Query: 123 ELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 +L G+ AFLPGS + +R V + L G++ EFK+IKL+++R N+VVSRR ++E+E + +R Sbjct: 162 DLMGVDAFLPGSQIALRRVPNIDELLGQKYEFKIIKLNKRRRNIVVSRRVILETERAGKR 221 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 ++L++ L + KG+VKN+TD+GAF+DLGGVDGLLHITDM+W R+ HPSE+V +G E+ Sbjct: 222 EKLMKELAKDQVRKGVVKNITDFGAFIDLGGVDGLLHITDMSWGRISHPSEMVQIGMELE 281 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 +KVL D ER R+SLGLKQL PW +A +YP GT+++G+V ++T+YG F+E+E G+EG Sbjct: 282 IKVLDIDWERERISLGLKQLQSYPWKDVAAKYPVGTRVSGKVVSITNYGAFIELEPGIEG 341 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHN 362 LVH+SEM WT HPSK+V++G+ +E +VL +DE +ISLG+KQ + +PW + Sbjct: 342 LVHISEMSWTRNVRHPSKIVSIGEAIEAVVLKVDETEEKISLGMKQTEQDPWVILPLKYP 401 Query: 363 KGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQV 422 G R+ GK++++T FG F+ ++ GIDGL+H+SD+SW + KKGD + V+L + Sbjct: 402 VGTRINGKVRNLTSFGAFVEIEPGIDGLIHISDMSWTKRVQHPSEVVKKGDAVDVVILNI 461 Query: 423 DAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASE 482 D+E +RISLG+KQ EDP+ G + GKV + KG V+L + +EG++ S+ Sbjct: 462 DSENKRISLGLKQAEEDPWLRIGETYPVGTELPGKVVRLMDKGVVVDLGNDIEGFVPVSQ 521 Score = 221 bits (563), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 115/293 (39%), Positives = 178/293 (60%), Gaps = 6/293 (2%) Query: 149 GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAF 208 G ELE KV+ +D +R + + + + S + G V G V ++T+YGAF Sbjct: 277 GMELEIKVLDIDWERERISLGLKQL----QSYPWKDVAAKYPVGTRVSGKVVSITNYGAF 332 Query: 209 VDL-GGVDGLLHITDMAWKR-VKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDP 266 ++L G++GL+HI++M+W R V+HPS+IV++G+ I VLK D ++SLG+KQ +DP Sbjct: 333 IELEPGIEGLVHISEMSWTRNVRHPSKIVSIGEAIEAVVLKVDETEEKISLGMKQTEQDP 392 Query: 267 WVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGD 326 WV + +YP GT++ G+V NLT +G FVEIE G++GL+H+S+M WT + HPS+VV GD Sbjct: 393 WVILPLKYPVGTRINGKVRNLTSFGAFVEIEPGIDGLIHISDMSWTKRVQHPSEVVKKGD 452 Query: 327 VVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGG 386 V+V++L+ID E +RISLGLKQ + +PW + ET+ G + GK+ + D G+ + L Sbjct: 453 AVDVVILNIDSENKRISLGLKQAEEDPWLRIGETYPVGTELPGKVVRLMDKGVVVDLGND 512 Query: 387 IDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAED 439 I+G V +S ++ + VL+VD RI L V + E+ Sbjct: 513 IEGFVPVSQLNPEGTVTNPADFTYEAMNFVMRVLEVDPIHRRIVLAVTSIPEE 565 Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 134/388 (34%), Positives = 218/388 (56%), Gaps = 26/388 (6%) Query: 149 GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGME----VKGIVKNLTD 204 G E+E + L+ + +VV+S++ A+ ++ E ++ E V+G + Sbjct: 104 GDEVEVLLEHLEDQEGSVVLSKK-------KADFMRVWERIRVAYESDQPVEGTLVKKIK 156 Query: 205 YGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGE 264 G VDL GVD L + +A +RV + E++ G + K++K ++ R + + + + E Sbjct: 157 GGVVVDLMGVDAFLPGSQIALRRVPNIDELL--GQKYEFKIIKLNKRRRNIVVSRRVILE 214 Query: 265 DPWVA----IAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSK 320 + K + G V N+TD+G F+++ GV+GL+H+++M W + HPS+ Sbjct: 215 TERAGKREKLMKELAKDQVRKGVVKNITDFGAFIDLG-GVDGLLHITDMSWGRIS-HPSE 272 Query: 321 VVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIF 380 +V +G +E+ VLDID ER RISLGLKQ ++ PW+ A + G RV GK+ SIT++G F Sbjct: 273 MVQIGMELEIKVLDIDWERERISLGLKQLQSYPWKDVAAKYPVGTRVSGKVVSITNYGAF 332 Query: 381 IGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDP 440 I L+ GI+GLVH+S++SW + G+ I AVVL+VD E+ISLG+KQ +DP Sbjct: 333 IELEPGIEGLVHISEMSWTRNVRHPSKIVSIGEAIEAVVLKVDETEEKISLGMKQTEQDP 392 Query: 441 FNNWVALNKK---GAIVTGKVTAVDAKGATVELADGVEGYLRASEAS-RDRVEDATLVLS 496 WV L K G + GKV + + GA VE+ G++G + S+ S RV+ + V+ Sbjct: 393 ---WVILPLKYPVGTRINGKVRNLTSFGAFVEIEPGIDGLIHISDMSWTKRVQHPSEVVK 449 Query: 497 VGDEVEAKFTGVDRKNRAISLSVRAKDE 524 GD V+ +D +N+ ISL ++ +E Sbjct: 450 KGDAVDVVILNIDSENKRISLGLKQAEE 477 >UniRef50_B3QSU3 Ribosomal protein S1 n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QSU3_CHLT3 Length = 616 Score = 436 bits (1120), Expect = e-120, Method: Compositional matrix adjust. Identities = 228/542 (42%), Positives = 338/542 (62%), Gaps = 12/542 (2%) Query: 5 FAQLFEESLKEIETRPGS---------IVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN 55 FA E LKE+E S IV+G VV+I + V +D GLKSE + +F+N Sbjct: 27 FADYGEAELKEMEALYSSTLNELNEEEIVKGRVVSISEKDVTIDVGLKSEGIVQLIEFQN 86 Query: 56 AQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGK 115 + E++ GD+V+V L+++ED G+ +LS+ KA W + + E ++G I + Sbjct: 87 PE---ELKEGDDVEVFLESIEDKMGQLILSKRKADVMRIWEKIYDSLEKGTIISGKIIAR 143 Query: 116 VKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIE 175 VKGG TV L+G+ AFLPGS +DV+PVRD L G+ ++F+V+K++ N+VVS + ++E Sbjct: 144 VKGGMTVSLSGVEAFLPGSQIDVKPVRDFDALVGQTMDFRVVKINPLTQNIVVSHKVILE 203 Query: 176 SENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIV 235 E A R ++L N++ GM ++G VKN+TD+G FVDLGG+DGL+HITD+ W R+ HPSE V Sbjct: 204 EEYEARRKEMLANIKVGMVLEGTVKNITDFGIFVDLGGLDGLVHITDITWGRISHPSEAV 263 Query: 236 NVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVE 295 N+ D I V V+ +D ++ RVSLG+KQL PW I ++YP GT++TG+V ++TDYG FVE Sbjct: 264 NLDDPIKVVVIGYDADKQRVSLGMKQLTPHPWENIEEKYPAGTRVTGKVVSITDYGAFVE 323 Query: 296 IEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQ 355 IE+G+EGLVH+SEM WT HP++ V +G VE ++L+ID+E ++SL +KQ + +PW Sbjct: 324 IEKGIEGLVHISEMSWTQHIKHPNQFVTMGQEVECVILNIDKEHTKLSLSMKQTEEDPWI 383 Query: 356 QFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEI 415 AE + +G +++ITDFG+F+ L+ G+DGLVH+SD+SW KK E+ Sbjct: 384 VLAEKYPVDSEHKGIVRNITDFGVFVELESGVDGLVHISDLSWTKKIRHPSEIVKKNQEL 443 Query: 416 AAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVE 475 VL+ D + RI+LG KQ+ DP++++ G GK+ + KG VEL GV+ Sbjct: 444 DVKVLKFDVKARRIALGHKQIEPDPWSDFENDYAVGTETKGKIAQIIEKGVIVELPSGVD 503 Query: 476 GYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVN 535 G++ AS + V D VGDE+ K DR+N+ I LS + K+ I Sbjct: 504 GFVPASHLLQGGVRDINASFKVGDELPLKVIEFDRENKRIILSALEYFKGKSKEEIEEYM 563 Query: 536 KQ 537 KQ Sbjct: 564 KQ 565 >UniRef50_B2UME1 Ribosomal protein S1 n=6 Tax=Chlamydiae/Verrucomicrobia group RepID=B2UME1_AKKM8 Length = 562 Score = 424 bits (1090), Expect = e-117, Method: Compositional matrix adjust. Identities = 232/523 (44%), Positives = 338/523 (64%), Gaps = 13/523 (2%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE 61 T A+L + +E+ R GSIV G + I VVLVD G KSE AI +F++ E Sbjct: 3 TTELAELIDSKFREL--REGSIVTGTIQEIRPQVVLVDIGYKSEGAISISEFEDE----E 56 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 I+VGD+++V L+ +E+ G +LS+EKA + W + Y D V G + VKGG Sbjct: 57 IEVGDQIEVLLERLENDEGIVVLSKEKAAHKQNWDKIVGVYRDGGLVKGKVKSVVKGGLM 116 Query: 122 VELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 V + G+ AFLPGS VD+ P RD GK EFK++K++ R N+V+SRR VIE+E + + Sbjct: 117 VNV-GVEAFLPGSQVDIIPPRDLNEYVGKVYEFKIVKVNDDRKNIVLSRREVIEAERADQ 175 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEI 241 R + LE ++EG +V+GIVKN+TD+GAFVDL G+DGLLHITDM+W RV HPSE++++G + Sbjct: 176 RQRFLETVKEGDKVEGIVKNITDFGAFVDLRGMDGLLHITDMSWGRVNHPSEMLHIGQSL 235 Query: 242 TVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVE 301 V +L+ DRE+ RVSLGLKQ+ ++PW I ++YP + + GRVT L YG FVE+E+GVE Sbjct: 236 EVVILEVDREKERVSLGLKQMTDNPWADIERKYPINSHVKGRVTKLLPYGAFVELEKGVE 295 Query: 302 GLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETH 361 GLVHVSE+ W + PS V+ + +E +VL I + ++ISLG++Q + NPW Sbjct: 296 GLVHVSELSWVKRITRPSDVLKLDQEIEAVVLSISVKEQKISLGVRQLEDNPWADIESRF 355 Query: 362 NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQ 421 G ++G+++++T +G F+GL+ GIDG++H+SD+SW KKGDE+ A+VL+ Sbjct: 356 PIGTVIKGQVRNLTPYGAFVGLEEGIDGMIHVSDMSWTRKINHPSEVLKKGDEVEAIVLE 415 Query: 422 VDAERERISLGVKQLAEDPFNNWVALN---KKGAIVTGKVTAVDAKGATVELADGVEGYL 478 + E +R+SLG+KQL DP W ++N K G +VTG+V + + GA V L ++G + Sbjct: 416 IKKEDQRVSLGIKQLESDP---WESINDRFKVGDMVTGQVAKIASFGAFVNLDGDIDGLI 472 Query: 479 RASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRA 521 S+ S D VE V+ VGDE+ A+ VD R I LS++A Sbjct: 473 HISQLSEDHVERVKDVIKVGDEITARVIKVDSIERRIGLSIKA 515 Score = 222 bits (565), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 144/415 (34%), Positives = 238/415 (57%), Gaps = 21/415 (5%) Query: 36 VLVDAGLKSESAIPAEQFKN-AQGELEIQVGDEVDVALDAVEDGFGETLLSREK---AKR 91 ++V+ G+ E+ +P Q +L VG + + V D +LSR + A+R Sbjct: 115 LMVNVGV--EAFLPGSQVDIIPPRDLNEYVGKVYEFKIVKVNDDRKNIVLSRREVIEAER 172 Query: 92 HEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLP---GSLVDVRPVRDTLHLE 148 + + ++ + V G++ G V+L G+ L S V + LH+ Sbjct: 173 ADQRQRFLETVKEGDKVEGIVKNITDFGAFVDLRGMDGLLHITDMSWGRVNHPSEMLHI- 231 Query: 149 GKELEFKVIKLDQKRNNVVVSRRAVIESE-NSAERDQLLENLQEGMEVKGIVKNLTDYGA 207 G+ LE ++++D+++ V + + + ++ ER + + VKG V L YGA Sbjct: 232 GQSLEVVILEVDREKERVSLGLKQMTDNPWADIERKYPINS-----HVKGRVTKLLPYGA 286 Query: 208 FVDL-GGVDGLLHITDMAW-KRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGED 265 FV+L GV+GL+H+++++W KR+ PS+++ + EI VL + ++SLG++QL ++ Sbjct: 287 FVELEKGVEGLVHVSELSWVKRITRPSDVLKLDQEIEAVVLSISVKEQKISLGVRQLEDN 346 Query: 266 PWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVG 325 PW I R+P GT + G+V NLT YG FV +EEG++G++HVS+M WT K HPS+V+ G Sbjct: 347 PWADIESRFPIGTVIKGQVRNLTPYGAFVGLEEGIDGMIHVSDMSWTRKINHPSEVLKKG 406 Query: 326 DVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDG 385 D VE +VL+I +E +R+SLG+KQ +++PW+ + GD V G++ I FG F+ LDG Sbjct: 407 DEVEAIVLEIKKEDQRVSLGIKQLESDPWESINDRFKVGDMVTGQVAKIASFGAFVNLDG 466 Query: 386 GIDGLVHLSDISWNVAGEEAVRE-YKKGDEIAAVVLQVDAERERISLGVKQLAED 439 IDGL+H+S +S + E V++ K GDEI A V++VD+ RI L +K + D Sbjct: 467 DIDGLIHISQLSEDHV--ERVKDVIKVGDEITARVIKVDSIERRIGLSIKAVNYD 519 Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 101/288 (35%), Positives = 154/288 (53%), Gaps = 41/288 (14%) Query: 94 AWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLP-GSLVDV-RPVRDTLHLEGKE 151 W +E+ Y IN VKG T LP G+ V++ + V +H+ E Sbjct: 260 PWADIERKYP--------INSHVKGRVT-------KLLPYGAFVELEKGVEGLVHV--SE 302 Query: 152 LEF--------KVIKLDQKRNNVVVSRRAVIESENSAERDQLLEN--------LQEGMEV 195 L + V+KLDQ+ VV+S +V E + S QL +N G + Sbjct: 303 LSWVKRITRPSDVLKLDQEIEAVVLSI-SVKEQKISLGVRQLEDNPWADIESRFPIGTVI 361 Query: 196 KGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKR-VKHPSEIVNVGDEITVKVLKFDRERT 253 KG V+NLT YGAFV L G+DG++H++DM+W R + HPSE++ GDE+ VL+ +E Sbjct: 362 KGQVRNLTPYGAFVGLEEGIDGMIHVSDMSWTRKINHPSEVLKKGDEVEAIVLEIKKEDQ 421 Query: 254 RVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTN 313 RVSLG+KQL DPW +I R+ G +TG+V + +G FV ++ ++GL+H+S++ + Sbjct: 422 RVSLGIKQLESDPWESINDRFKVGDMVTGQVAKIASFGAFVNLDGDIDGLIHISQL--SE 479 Query: 314 KNIHPSK-VVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAET 360 ++ K V+ VGD + V+ +D RRI L +K + Q ET Sbjct: 480 DHVERVKDVIKVGDEITARVIKVDSIERRIGLSIKAVNYDTEQLRRET 527 >UniRef50_B0VI92 30S ribosomal subunit protein S1 (Modular protein) n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VI92_9BACT Length = 932 Score = 422 bits (1085), Expect = e-116, Method: Compositional matrix adjust. Identities = 221/521 (42%), Positives = 330/521 (63%), Gaps = 16/521 (3%) Query: 8 LFEESLKEIETRPGSIVRGVVVAI-DKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGD 66 ++EES + G I+ G VV I DKDV VD G KSE IP +F ++ Sbjct: 105 MYEESFSSF--KKGEIIEGTVVDITDKDV-RVDIGFKSEGIIPISEFAYTGIP---ELNS 158 Query: 67 EVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNG 126 + V ++ +E+G G+ LLS++KA +++A+ D +++G+I +VKGG V++ G Sbjct: 159 VIKVYINEIENGEGKLLLSKKKADYMINIERIKQAFADKSSLSGIIRRRVKGGMIVDVLG 218 Query: 127 IRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLL 186 I AFLPGS + ++P+ + GKEL FKV+ +D++ +N+++SRR V+E E +R +LL Sbjct: 219 IEAFLPGSQMSLKPIPNLDQFIGKELYFKVVNIDEEHHNIILSRRQVLEEEAEQKRQELL 278 Query: 187 ENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVL 246 +Q E+ G VKN+T YGAF+DLGG+DGLLH+TDM+W ++ HPSE++ +GD++ VKV+ Sbjct: 279 RKIQIDAELDGEVKNITQYGAFIDLGGIDGLLHLTDMSWGKLNHPSEMLQIGDKVKVKVI 338 Query: 247 KFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHV 306 FD E R+SLG+KQL PW I +YPEG+++TG+V NL +G FVE+E GVEGLVH+ Sbjct: 339 NFDPETNRISLGMKQLVPHPWENIEIKYPEGSRVTGKVVNLKPFGAFVELEPGVEGLVHI 398 Query: 307 SEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDR 366 SEM WT K K + +G+ + +VLDID+E +RISLG+KQ + NPW + + G Sbjct: 399 SEMSWTKKITDAHKFLKIGETINAIVLDIDKENKRISLGMKQMEPNPWLTIEDRYPIGTI 458 Query: 367 VEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAER 426 + KIKS+T FG F+ ++ GIDGL+H+SDISW YKK E+ AVVL +D + Sbjct: 459 LTRKIKSLTAFGAFVEIEEGIDGLIHISDISWTKRIYHPREVYKKNQEVEAVVLSIDRAQ 518 Query: 427 ERISLGVKQLAEDPFNNWVALNKKGAI---VTGKVTAVDAKGATVELA---DGVEGYLRA 480 R++LGVKQL DP W L++ I V GK+ + KG V++ D VEG++ Sbjct: 519 HRVALGVKQLVPDP---WETLDQSLPINTEVKGKIGKLIPKGVLVDIPVNNDVVEGFVPV 575 Query: 481 SEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRA 521 S + ++E + +G+E+ K +D +NR + LSV+A Sbjct: 576 SHLAIPKLEHSEDAFYIGEEIPLKVIELDMENRRLILSVKA 616 >UniRef50_B3TCT6 Putative S1 RNA binding domain protein n=2 Tax=root RepID=B3TCT6_9BACT Length = 571 Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust. Identities = 212/552 (38%), Positives = 343/552 (62%), Gaps = 31/552 (5%) Query: 1 MTESFAQLFEESLKEIET-----------RPGSIVRGVVVAIDKDVVLVDAGLKSESAIP 49 M E+ Q +S KE E + G I GVV + K+ + VD GLKSE AIP Sbjct: 1 MEETIKQYKSKSHKEFEKLLSQDWGNRKFKEGEITTGVVSKVGKNFIFVDLGLKSEGAIP 60 Query: 50 AEQFKNAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVT 109 E+FK + +I++G +++V L+ +E+ G ++SREKA++ +W +EKA+E+ E +T Sbjct: 61 VEEFKLTKEIDKIEIGSKIEVLLEKIENKTGNVVISREKARKAHSWKKMEKAFENQEKIT 120 Query: 110 GVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVS 169 GVI K KGGF V++ FLPGS +D++P+++ HL F+ +KLD++R N+V+S Sbjct: 121 GVIISKCKGGFIVDVESCLCFLPGSQIDLKPLKNFDHLMKVPQTFECVKLDKRRGNIVLS 180 Query: 170 RRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVK 229 RRA++E +RD+++ L+EG V G +KNLT++GAFVDL GVD LLHITD++W+R+ Sbjct: 181 RRAILEKILVRDRDKIISKLKEGDIVSGTIKNLTEWGAFVDLNGVDALLHITDISWRRIN 240 Query: 230 HPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTD 289 P++++++G I K++K + ++SLG+KQL EDP+ + Y G T +TN+ D Sbjct: 241 KPADLLSIGQSIKAKIIKIEEGTKKISLGVKQLTEDPYKKVIDSYEVGKNYTAIITNVQD 300 Query: 290 YGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC 349 YGCF ++EEG+EGL+H SE+ WT KNIHP KV++ ++V +L+ D E+RR+SL K Sbjct: 301 YGCFAKLEEGLEGLIHQSELSWTKKNIHPGKVLSTSQKIQVQILEKDMEKRRLSLSYKNT 360 Query: 350 KANPWQQFAETHNKGDRVEGKIKSITDFGIFIGL-DGGIDGLVHLSDISWNVAGEEAVRE 408 NPW +F + H G+ EG +K+ITD+G+FI + D +DG++H D++W+ E + + Sbjct: 361 LVNPWVKFTKNHKVGNEAEGVVKNITDYGLFISVKDSELDGMIHYKDLNWS-EKESELEK 419 Query: 409 YKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATV 468 YKK I +L+++ E+E+I LG+KQL +DPF + +NKK ++ VTA+ + Sbjct: 420 YKKNQLIKFKILEINQEKEKIRLGIKQLTQDPFKFF--MNKK---ISDVVTAIVVSSSN- 473 Query: 469 ELADGVEGY---------LRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSV 519 DG+ Y ++ S+ +++ + GD V+ +D++NR + LS+ Sbjct: 474 ---DGIHVYAGNKDLLLLIKRSQLAKEPENQRPSRWARGDRVDCMIIELDKENRKVVLSI 530 Query: 520 RAKDEADEKDAI 531 + +E ++K I Sbjct: 531 KVLEEQEQKITI 542 >UniRef50_Q2S1M7 Ribosomal protein S1, putative n=2 Tax=Rhodothermaceae RepID=Q2S1M7_SALRD Length = 871 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 219/508 (43%), Positives = 330/508 (64%), Gaps = 6/508 (1%) Query: 16 IETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAV 75 I+ R IV G V+ +++D V++D G KS+ + ++F GE EI GD V+V L+ Sbjct: 191 IDVREQDIVEGRVLRVNEDYVVIDIGYKSDGIVSRDEF----GEEEIHPGDTVEVYLERK 246 Query: 76 EDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL-NGIRAFLPGS 134 ED G+ +LS+E+A + W +E+ YE+ E + G I ++KGG VEL +G+ AFLPGS Sbjct: 247 EDRDGQLVLSKEQADKVRRWQRVEEIYENEEVIEGTIIRRIKGGMIVELFDGMEAFLPGS 306 Query: 135 LVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGME 194 +DVRPVRD +EFK++KL+ + N+VVS R +IE E +R ++LE L+ G Sbjct: 307 QIDVRPVRDFESYLETRMEFKIVKLNPENENIVVSHRELIEHELEEQRQEILEQLEVGQV 366 Query: 195 VKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTR 254 ++G VKN+ D+G F+DLGGVDGLLHITD++W RV HPSE+V + E+ V VL ++ ER R Sbjct: 367 LEGTVKNIVDFGVFIDLGGVDGLLHITDLSWGRVSHPSEVVELDQELEVVVLDYEEERQR 426 Query: 255 VSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNK 314 +SLGLKQL + PW I +Y EG + G+V ++T+YG FVEIE+G+EGLVH+SEM WT Sbjct: 427 ISLGLKQLRDHPWDQIGNKYDEGDVVEGKVVSITNYGAFVEIEKGIEGLVHISEMSWTRH 486 Query: 315 NIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSI 374 HPS++V++G VV+V +L+ID+E R+ISLG+KQ + +PW+ ++ + G + G +++I Sbjct: 487 IEHPSQMVSLGQVVDVKILNIDQEERKISLGMKQLEPDPWEGISDRYPAGTVLTGTVRNI 546 Query: 375 TDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVK 434 T+FG+F+ ++ GIDGLVH+SD+SW + E+ V+L +D ER RISLG K Sbjct: 547 TNFGVFVEIEPGIDGLVHVSDLSWTKKIRHPGDMVDEEQELDVVILNIDEERRRISLGHK 606 Query: 435 QLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLV 494 Q+ +P++ + ++G TG+V V+ KG V+L VE ++ SE ++ + Sbjct: 607 QVKTNPWDQFADAYEEGNDTTGEVVRVEDKGLVVQLPLDVEAFVPGSEL-KNGPKAFKNH 665 Query: 495 LSVGDEVEAKFTGVDRKNRAISLSVRAK 522 GDE+E + D+ + I LS AK Sbjct: 666 YHEGDELELQVIRFDKDQKDIVLSETAK 693 >UniRef50_D2R4L6 Ribosomal protein S1 n=7 Tax=Planctomycetales RepID=D2R4L6_9PLAN Length = 600 Score = 411 bits (1056), Expect = e-113, Method: Compositional matrix adjust. Identities = 217/504 (43%), Positives = 328/504 (65%), Gaps = 11/504 (2%) Query: 23 IVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALD-------AV 75 IV G V+ + +VLVD G KSE +IP ++++ +GE QVG V V ++ A Sbjct: 46 IVEGRVLRVADGMVLVDIGFKSEGSIPLDEWE--EGEEPPQVGQLVRVLIEDLEDETAAP 103 Query: 76 EDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSL 135 EDG G +S+ KAK+ +AW + ++ + VTG ++ K+KGG V++ G+ FLP S Sbjct: 104 EDG-GMVRISKRKAKKLDAWKEMMDRIKEGQVVTGTVSRKIKGGLLVDIEGVNVFLPASQ 162 Query: 136 VDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEV 195 VD+R D G+ ++ +V+K+D+ R N+VVSRR++IE + +R+ LL+ L+ G Sbjct: 163 VDIRRPADIGDYIGRTVQCEVLKIDEARRNIVVSRRSLIERQREEDREALLKELEIGQVR 222 Query: 196 KGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRV 255 KG+VKN+ ++GAFVDLGG+DGLLHITDM+W+R+ HPSE+V + EI V VL DRE+ ++ Sbjct: 223 KGVVKNIAEFGAFVDLGGIDGLLHITDMSWERIGHPSEMVAIDQEIEVMVLHIDREKKKI 282 Query: 256 SLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKN 315 +LGLKQ +PW + +YP GT + G V N+ YG FV++E G+EGLVH+SEM WT + Sbjct: 283 ALGLKQKEGNPWADVDTKYPVGTVVKGSVVNVMSYGAFVKLEPGIEGLVHISEMSWTRRV 342 Query: 316 IHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSIT 375 HPS++VN+GD + V++L +D++ +++SLG+KQ + NPW + AE + VEGK++++T Sbjct: 343 NHPSELVNIGDEISVVILGVDKDGQQLSLGMKQTQENPWTRVAEKYPVDTIVEGKVRNLT 402 Query: 376 DFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQ 435 ++G F+ L+ GIDGL+H+SD+SW +KG + +L VD ER RI+LG+KQ Sbjct: 403 NYGAFVELEEGIDGLLHVSDMSWTRKISHPSEMLEKGQPVRCKILSVDQERRRIALGLKQ 462 Query: 436 LAEDPF-NNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLV 494 L EDP+ + + G +V+G VT + G V L DG+EG L SE + +VE+ V Sbjct: 463 LDEDPWARDIPGKYQPGQVVSGAVTKITNFGVFVGLEDGLEGLLHISELADHKVENPEDV 522 Query: 495 LSVGDEVEAKFTGVDRKNRAISLS 518 + VGD+++ K VD R I LS Sbjct: 523 VKVGDKIDVKILRVDIDERKIGLS 546 >UniRef50_Q8KTS5 Ribosomal protein S1 n=1 Tax=Candidatus Tremblaya princeps RepID=Q8KTS5_TREPR Length = 518 Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust. Identities = 215/429 (50%), Positives = 283/429 (65%), Gaps = 11/429 (2%) Query: 7 QLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE-LEIQVG 65 +L E K + PGSIV VVAI + V++ AGLKS+S +P +F + QG+ LE++VG Sbjct: 6 RLLREYCKYYDAGPGSIVAARVVAISSNHVVLRAGLKSDSRVPLGEFVSPQGDRLEVKVG 65 Query: 66 DEVDVALDAVE-DGF--GETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 D V L VE D + G LSR KA+R AW L+ A+ T+ G + G+VKGG T Sbjct: 66 D---VTLAYVERDAYDEGTVRLSRSKARRRVAWGILDSAHRTRGTIMGTVVGRVKGGMTA 122 Query: 123 ELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 +NG+RAFLPGSL+D RPV+D EG+ L F VIKLD+KR NVV+SRR+VIE + R Sbjct: 123 VVNGMRAFLPGSLIDTRPVKDAERYEGRRLRFHVIKLDRKRGNVVLSRRSVIERRQAENR 182 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 ++LL +L +G V+G++KN+TDYGAF+DLGG+DGLLHITD++W+R++HPS++++VGD IT Sbjct: 183 NRLLASLGDGDVVQGVIKNITDYGAFIDLGGLDGLLHITDISWRRIRHPSQVLSVGDRIT 242 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 VKVLKFDR +TRVSLGLKQL DPW I RYP G+++ GRVTN+ DYG FVEIE G+EG Sbjct: 243 VKVLKFDRTKTRVSLGLKQLHPDPWAGIIGRYPAGSRVRGRVTNIADYGLFVEIERGIEG 302 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHN 362 L+HVSEM +K + VG V V VLD+ + RRRISLG+K NPW F + Sbjct: 303 LLHVSEMHQKSKGTISLRHFRVGQYVNVTVLDVSKTRRRISLGMKHGTLNPWLTFYKGFR 362 Query: 363 KGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQV 422 K DR+ I+S D GI + L G+ G+V +S G + A V+ V Sbjct: 363 KNDRMGAIIRSPVDVGILVDLPMGVHGVVCMSKDLRRRLLRALC----SGGVVEARVVGV 418 Query: 423 DAERERISL 431 D R RISL Sbjct: 419 DVNRGRISL 427 Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 94/289 (32%), Positives = 151/289 (52%), Gaps = 17/289 (5%) Query: 238 GDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRY----PEGTKLTGRVTNLTDYGCF 293 G + V+K DR+R V L + + E R +G + G + N+TDYG F Sbjct: 149 GRRLRFHVIKLDRKRGNVVLSRRSVIERRQAENRNRLLASLGDGDVVQGVIKNITDYGAF 208 Query: 294 VEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP 353 +++ G++GL+H++++ W HPS+V++VGD + V VL D + R+SLGLKQ +P Sbjct: 209 IDLG-GLDGLLHITDISWRRIR-HPSQVLSVGDRITVKVLKFDRTKTRVSLGLKQLHPDP 266 Query: 354 WQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGD 413 W + G RV G++ +I D+G+F+ ++ GI+GL+H+S++ G ++R ++ G Sbjct: 267 WAGIIGRYPAGSRVRGRVTNIADYGLFVEIERGIEGLLHVSEMHQKSKGTISLRHFRVGQ 326 Query: 414 EIAAVVLQVDAERERISLGVKQLAEDP----FNNWVALNKKGAIVTGKVTAVDAKGATVE 469 + VL V R RISLG+K +P + + ++ GAI+ V G V+ Sbjct: 327 YVNVTVLDVSKTRRRISLGMKHGTLNPWLTFYKGFRKNDRMGAIIRSPVDV----GILVD 382 Query: 470 LADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLS 518 L GV G + S+D L G VEA+ GVD ISL+ Sbjct: 383 LPMGVHGVV---CMSKDLRRRLLRALCSGGVVEARVVGVDVNRGRISLA 428 >UniRef50_Q0EYT6 Ribosomal protein S1 n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EYT6_9PROT Length = 621 Score = 404 bits (1038), Expect = e-111, Method: Compositional matrix adjust. Identities = 229/547 (41%), Positives = 335/547 (61%), Gaps = 8/547 (1%) Query: 3 ESFAQLFEESLKEI-ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE 61 +SF L+E SLKE E R G +V G+VV ++ DVV++D G K+E IP +F+ A G Sbjct: 71 DSFRLLYEASLKEKGEIRKGEMVTGMVVGLNADVVVIDVGTKAEGTIPLAEFEQA-GLPV 129 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 +G E+ + +V G +L S ++ EAW +E A D TV VI +VKGG+ Sbjct: 130 PAIGTEIKALIQSVGGSSGVSL-SVLAIRQREAWDAIEAAVADESTVDAVITSEVKGGYR 188 Query: 122 VELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 V L+G+ AF+P S D +L GK + V++ ++ N+VVSRR + + E Sbjct: 189 VSLSGLNAFMPRSEADTDIHVLPANLIGKACKVAVLEARRRPENIVVSRRRPLTAALEVE 248 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEI 241 R G + G VK L D+GAFVD+GGVD LLH++D++W+R+KHPSE+++VG + Sbjct: 249 RAAFFAQHAVGDRLSGEVKRLADFGAFVDIGGVDALLHVSDVSWRRIKHPSEMLSVGQSV 308 Query: 242 TVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVE 301 +V+++K + E +VS+ +K L DPW + Y G LTG V L D+G VE+E G+E Sbjct: 309 SVEIVKLNAETGKVSVSMKALQSDPWDNVEAIYEPGMGLTGTVRRLLDFGAVVELEPGIE 368 Query: 302 GLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETH 361 G++H SE+ WTN++++P+ V+ GDVV+V+VL++D RRI L LK NPWQQ+ H Sbjct: 369 GMIHRSELSWTNRDVNPAAVLAEGDVVDVVVLEVDASARRIRLSLKAVSENPWQQWMADH 428 Query: 362 NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQ 421 G V GKIK+ITDFG F+ + G+DGLVH+ ++SW +G A+ Y KG E+ AVVL Sbjct: 429 PIGTHVSGKIKNITDFGFFVHVADGMDGLVHMENLSWEKSGAAAMEPYSKGQEVEAVVLG 488 Query: 422 VDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRAS 481 VD E++RI+LG+KQL+ DPF ++A K+G V G V V G VELADGV+ ++ Sbjct: 489 VDVEKQRIALGIKQLSADPFELFLAGVKRGNSVNGTVVDVKPAGVVVELADGVQAFMPMR 548 Query: 482 EASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDAN 541 E RD E L VG EVEAK V+ K R ++LS+R +E++A+ ++Q Sbjct: 549 EVPRDHGE-----LKVGSEVEAKIVEVNNKRRQVTLSIRQHLIQEEREAMRNYSRQTAEE 603 Query: 542 FSNNAMA 548 + +A+A Sbjct: 604 SAPSALA 610 >UniRef50_A4SGB6 SSU ribosomal protein S1P n=12 Tax=Chlorobiaceae RepID=A4SGB6_PROVI Length = 602 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 209/512 (40%), Positives = 324/512 (63%), Gaps = 5/512 (0%) Query: 7 QLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGD 66 QL+ +L +I IV+G +V+I V +D G KSE + +F++ E EIQVGD Sbjct: 48 QLYTSTLNQINQ--DEIVKGRIVSISNKDVTIDVGYKSEGIVSLLEFRD---EDEIQVGD 102 Query: 67 EVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNG 126 +V+V L+ +ED G+ +LS++KA W + + E+ ++G I +VKGG TV L+G Sbjct: 103 DVEVYLENIEDKMGQLILSKKKADVLRIWDKIYDSIENDTIISGKIINRVKGGMTVSLSG 162 Query: 127 IRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLL 186 + AFLPGS +DV+PVRD L G+ ++F+V+K++ N+VVS + ++E E +A R+++L Sbjct: 163 VEAFLPGSQIDVKPVRDFDALVGQTMDFRVVKINPVTQNIVVSHKVILEEEYAARREEML 222 Query: 187 ENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVL 246 ++++ GM ++G VKN+TD+G FVDLGG+DGL+HITD+ W R+ HPSE+V++ I V V+ Sbjct: 223 DSIKVGMVLEGTVKNITDFGIFVDLGGLDGLVHITDITWGRINHPSEVVDLDQPIKVVVV 282 Query: 247 KFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHV 306 FD RVSLG+KQL PW I +YP G+K GRV ++TDYG FVEIE+G+EGLVH+ Sbjct: 283 GFDENTKRVSLGMKQLEAHPWENIELKYPVGSKAQGRVVSITDYGAFVEIEKGIEGLVHI 342 Query: 307 SEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDR 366 SEM WT HP + V +G VE ++L+ID++ ++SL +K+ +PW +E + + R Sbjct: 343 SEMSWTQHIKHPGQFVTLGQEVECVILNIDKDHTKLSLSMKRVNEDPWIALSEKYVENTR 402 Query: 367 VEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAER 426 +G + +ITDFG+F+ L+ G+DGLVH+SD+SW KK E+ VL+ D Sbjct: 403 HKGTVSNITDFGVFVELEPGVDGLVHISDLSWTKKIRHPSELVKKNQELEVKVLKFDVHA 462 Query: 427 ERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRD 486 RI+LG KQ+ DP+ + GA + +++ + KG V L V+G++ A+ + Sbjct: 463 RRIALGHKQMNPDPWGGFEQQYAVGAESSAEISQIIEKGVIVILPGDVDGFVPATHLLQG 522 Query: 487 RVEDATLVLSVGDEVEAKFTGVDRKNRAISLS 518 V+D +GD + + D++N+ I LS Sbjct: 523 GVKDIHSSFKIGDALPLRVIEFDKENKRIILS 554 >UniRef50_C6XS49 RNA binding S1 domain protein n=62 Tax=Bacteroidetes RepID=C6XS49_PEDHD Length = 644 Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust. Identities = 190/490 (38%), Positives = 318/490 (64%), Gaps = 8/490 (1%) Query: 5 FAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQV 64 F ++ ++ +I G I+ G VV+I+ V+++ G KS+ + +F++ +++V Sbjct: 74 FEDMYTDTFNQITQ--GEIISGTVVSINNKDVVLNVGFKSDGLVSTSEFRDTP---DLKV 128 Query: 65 GDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL 124 GD+VDV ++A ED G+ +LSR++AK +W ++ +A ++ + G + + KGG V++ Sbjct: 129 GDKVDVFVEAPEDANGQLILSRKRAKTQRSWESINEALDNDRIINGFVKSRTKGGLIVDI 188 Query: 125 NGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQ 184 G+ AFLPGS +D++P+RD GK +EFKV+K++ + NVVVS + +IE + +++ + Sbjct: 189 MGVEAFLPGSQIDIKPIRDYDVYVGKTMEFKVVKINHEFKNVVVSHKILIEDDLESQKVE 248 Query: 185 LLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 ++ L++G ++G VKN+TD+G F+DLGGVDGLLHITD++W R++HP E++++ ++I V Sbjct: 249 IVSKLEKGQVLEGTVKNITDFGVFIDLGGVDGLLHITDISWGRIEHPKEVLSLDEKINVV 308 Query: 245 VLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLV 304 VL FD E+ R++LGLKQL PW ++ G+K+ G++ + DYG F+EI GVEGL+ Sbjct: 309 VLDFDDEKKRIALGLKQLTPHPWESLNADLAIGSKVKGKIVTVADYGAFLEIIPGVEGLI 368 Query: 305 HVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKG 364 HVSEM W+ P + + VGD +E VL +D E R++SLG+KQ +PWQ AE + G Sbjct: 369 HVSEMSWSQNLRSPQEFLKVGDEIEAEVLTLDREDRKMSLGIKQLTQDPWQNVAERYPIG 428 Query: 365 DRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDA 424 + +K++T+FG+F+ ++ GIDGL+H+SD+SW+ K GD +A VVL++D Sbjct: 429 SKHTAVVKNMTNFGVFVEIEEGIDGLIHISDLSWSKKVNHPNEFTKVGDTLAVVVLELDV 488 Query: 425 ERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEAS 484 + ++SLG KQL E+P++ + + +I G V V KGA + L GVEG++ + Sbjct: 489 DNRKLSLGHKQLEENPWDTFETIFTLDSIHQGTVVKVTDKGAVIALPYGVEGFVPTKHMA 548 Query: 485 RDRVEDATLV 494 + ED +++ Sbjct: 549 K---EDGSVI 555 >UniRef50_B5YH71 30S ribosomal protein S1 n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YH71_THEYD Length = 534 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 216/537 (40%), Positives = 326/537 (60%), Gaps = 23/537 (4%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE- 61 + L+E SL IE G I++G ++ + D V+VD G K E IP +F ++ EL+ Sbjct: 9 QELESLYEGSLSHIER--GEIIKGKIMGVRNDGVIVDVGYKFEGIIPLNEF--SEEELKN 64 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 I+ DE++V ++ ++D G LSR++A + + W L AYE A V I GK KGG Sbjct: 65 IKEADEIEVFIEKIDDAQGIISLSRDRALKIKGWEILMDAYEKALPVEVKITGKTKGGVL 124 Query: 122 VELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRN----------NVVVSRR 171 GI F+P SL+++R ++ GK + K+ K++ +N ++++SR+ Sbjct: 125 TSFYGINGFIPASLLEIRKPKNLDEYVGKTFKVKIEKIEPPKNLYGQWRNLKTSLILSRK 184 Query: 172 AVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHP 231 A ++ E + ++ E ++EG+++KG VKN+T+YG FVDLGG+DG LHI+D++W +V+HP Sbjct: 185 AYLQEEKEKMKKEISEKIKEGLKIKGTVKNITNYGVFVDLGGLDGFLHISDISWGKVRHP 244 Query: 232 SEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYG 291 S+ +G E VLK D E R++LG KQ DPW I K+Y G K+ G+VT + D+G Sbjct: 245 SQFFEIGSEYEFIVLKADTENERITLGYKQKKADPWENIDKKYHPGMKVRGKVTRVEDFG 304 Query: 292 CFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKA 351 FVE+EEGVEGLVHVSE+DW HP+ V + + V VLDID E R+ISL KQ K Sbjct: 305 LFVELEEGVEGLVHVSELDWIAPK-HPTYYAEVDEWINVKVLDIDRENRKISLSFKQLKP 363 Query: 352 NPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKK 411 PW+ A+ + GDR+ GK+K+ITDFGIF+ L G+DGL+H+SDISW + + +KK Sbjct: 364 KPWEVVAKKYKVGDRISGKVKTITDFGIFVRLPEGVDGLIHISDISWTKHIDHPSQIFKK 423 Query: 412 GDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKK-GAIVTGKVTAVDAKGATVEL 470 G ++ AV+L ++ E+E++SLG+KQL+EDP+ + K G I KV G V++ Sbjct: 424 GQKVDAVILSLEPEKEKLSLGIKQLSEDPWIKEIPEKFKIGEIYNAKVIKKTEHGLFVDI 483 Query: 471 ADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADE 527 VEG + SE ++R + GDE++ VD++ R I LS++ DE +E Sbjct: 484 EGIVEGLVYNSEIDKNR------TVKEGDEIKVIVVKVDKEKRKIGLSMKKIDENEE 534 >UniRef50_Q3YRK4 SSU ribosomal protein S1P n=21 Tax=Rickettsiales RepID=Q3YRK4_EHRCJ Length = 567 Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust. Identities = 206/524 (39%), Positives = 319/524 (60%), Gaps = 18/524 (3%) Query: 9 FEESLKEI---ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVG 65 F+ +LKE + G I+ G +V IDK V +D+GLKSES + ++F+ I +G Sbjct: 45 FQNALKEFIDDSVKEGQIIEGTIVCIDKGYVTIDSGLKSESIVSLKEFELGDDYQNIGIG 104 Query: 66 DEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN 125 +V + L+ +E G +LSREKA R E W LE+A E E V GVI +K G+TV++ Sbjct: 105 SKVKLYLEKIEGRNGSVVLSREKAIRDELWQKLEEAAERKEDVEGVIFSSIKCGYTVDIK 164 Query: 126 GIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQL 185 G+ AFLP S V +R V+D L GK+ +F+++K+D K+ N+VVSR+A++E + + Sbjct: 165 GVVAFLPASHVALRQVKDITPLLGKKQKFRILKMDNKQGNIVVSRKAILEESLADAKSLY 224 Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDL------GGVDGLLHITDMAWKRVKHPSEIVNVGD 239 L L EG ++G VK++T YG F+++ G VDGLLHITD++W RV HPS + + G Sbjct: 225 LSQLNEGDIIEGKVKSITKYGVFIEIHESPSVGVVDGLLHITDISWSRVSHPSAVFSCGQ 284 Query: 240 EITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEG 299 + K++K DRE ++SLG+KQL E PW I K+YP + G VT++ DYG FVE+E G Sbjct: 285 TVKTKIIKIDRENKKISLGVKQLEESPWSNIEKKYPVDSIHKGIVTSIEDYGVFVELETG 344 Query: 300 VEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAE 359 +EGLVHVSE+ WT ++ +++ G+ ++V VL ID + R+SL +K+C+ NPWQ F Sbjct: 345 IEGLVHVSEVSWTKNSLPINQLFMRGEEIQVKVLSIDTAKSRMSLSMKRCQENPWQAFTL 404 Query: 360 THNKGDRVEGKIKSITDFGIFIG-----LDGGIDGLVHLSDISWNVAGEEAVREYKKGDE 414 + G V KIK+IT+ GIF+ L+ GI+GL+ +++SW+++ E AV++Y GD Sbjct: 405 KYPLGSVVSTKIKNITNLGIFVSFEDNTLNDGIEGLIRTTELSWSLSPEAAVKKYSIGDS 464 Query: 415 IAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVT-AVDAKGATVELADG 473 + A +L ++ + +I LGVKQL DPF + + G + VT V+ G V++ +G Sbjct: 465 VEAKILMINPNKSKIDLGVKQLEYDPFLDLLKKTNLGDKIPVTVTKVVEDTGILVDVFNG 524 Query: 474 VEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISL 517 + E ++ + D GD++EA+ ++ N +SL Sbjct: 525 SNSFNLLIE--QEYLPDNKKFFP-GDKLEAEVLLIETYNMVLSL 565 Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 116/391 (29%), Positives = 209/391 (53%), Gaps = 29/391 (7%) Query: 149 GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGME----VKGIVKNLTD 204 G +++ + K++ + +VV+SR I RD+L + L+E E V+G++ + Sbjct: 104 GSKVKLYLEKIEGRNGSVVLSREKAI-------RDELWQKLEEAAERKEDVEGVIFSSIK 156 Query: 205 YGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGE 264 G VD+ GV L + +A ++VK + ++ G + ++LK D ++ + + K + E Sbjct: 157 CGYTVDIKGVVAFLPASHVALRQVKDITPLL--GKKQKFRILKMDNKQGNIVVSRKAILE 214 Query: 265 DPWVAIAKRY----PEGTKLTGRVTNLTDYGCFVEIEEG-----VEGLVHVSEMDWTNKN 315 + Y EG + G+V ++T YG F+EI E V+GL+H++++ W+ + Sbjct: 215 ESLADAKSLYLSQLNEGDIIEGKVKSITKYGVFIEIHESPSVGVVDGLLHITDISWSRVS 274 Query: 316 IHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSIT 375 HPS V + G V+ ++ ID E ++ISLG+KQ + +PW + + +G + SI Sbjct: 275 -HPSAVFSCGQTVKTKIIKIDRENKKISLGVKQLEESPWSNIEKKYPVDSIHKGIVTSIE 333 Query: 376 DFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQ 435 D+G+F+ L+ GI+GLVH+S++SW + + +G+EI VL +D + R+SL +K+ Sbjct: 334 DYGVFVELETGIEGLVHVSEVSWTKNSLPINQLFMRGEEIQVKVLSIDTAKSRMSLSMKR 393 Query: 436 LAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVE-----LADGVEGYLRASEASRDRVED 490 E+P+ + G++V+ K+ + G V L DG+EG +R +E S + Sbjct: 394 CQENPWQAFTLKYPLGSVVSTKIKNITNLGIFVSFEDNTLNDGIEGLIRTTELSWSLSPE 453 Query: 491 ATLV-LSVGDEVEAKFTGVDRKNRAISLSVR 520 A + S+GD VEAK ++ I L V+ Sbjct: 454 AAVKKYSIGDSVEAKILMINPNKSKIDLGVK 484 Score = 101 bits (251), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 64/187 (34%), Positives = 107/187 (57%), Gaps = 11/187 (5%) Query: 346 LKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLD-----GGIDGLVHLSDISWN- 399 L++ A+ + N+GD +EGK+KSIT +G+FI + G +DGL+H++DISW+ Sbjct: 213 LEESLADAKSLYLSQLNEGDIIEGKVKSITKYGVFIEIHESPSVGVVDGLLHITDISWSR 272 Query: 400 VAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVT 459 V+ AV + G + ++++D E ++ISLGVKQL E P++N +I G VT Sbjct: 273 VSHPSAV--FSCGQTVKTKIIKIDRENKKISLGVKQLEESPWSNIEKKYPVDSIHKGIVT 330 Query: 460 AVDAKGATVELADGVEGYLRASEAS--RDRVEDATLVLSVGDEVEAKFTGVDRKNRAISL 517 +++ G VEL G+EG + SE S ++ + L + G+E++ K +D +SL Sbjct: 331 SIEDYGVFVELETGIEGLVHVSEVSWTKNSLPINQLFMR-GEEIQVKVLSIDTAKSRMSL 389 Query: 518 SVRAKDE 524 S++ E Sbjct: 390 SMKRCQE 396 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 47/186 (25%), Positives = 86/186 (46%), Gaps = 23/186 (12%) Query: 354 WQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKK-- 411 WQ+ E + + VEG I S G + + G + L A A+R+ K Sbjct: 134 WQKLEEAAERKEDVEGVIFSSIKCGYTVDIKGVVAFLP---------ASHVALRQVKDIT 184 Query: 412 ---GDEIAAVVLQVDAERERISLGVKQLAEDPFNN----WVALNKKGAIVTGKVTAVDAK 464 G + +L++D ++ I + K + E+ + +++ +G I+ GKV ++ Sbjct: 185 PLLGKKQKFRILKMDNKQGNIVVSRKAILEESLADAKSLYLSQLNEGDIIEGKVKSITKY 244 Query: 465 GATVELADG-----VEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSV 519 G +E+ + V+G L ++ S RV + V S G V+ K +DR+N+ ISL V Sbjct: 245 GVFIEIHESPSVGVVDGLLHITDISWSRVSHPSAVFSCGQTVKTKIIKIDRENKKISLGV 304 Query: 520 RAKDEA 525 + +E+ Sbjct: 305 KQLEES 310 >UniRef50_Q027A8 SSU ribosomal protein S1P n=2 Tax=Acidobacteria RepID=Q027A8_SOLUE Length = 572 Score = 364 bits (935), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 203/492 (41%), Positives = 302/492 (61%), Gaps = 8/492 (1%) Query: 3 ESFAQL---FEESLKEIETRPGSI-VRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQG 58 ESF + +E+S T PG + G VVAI + L+D G K+E IP F++ G Sbjct: 25 ESFGDILTQYEQSHTHRITEPGKKGLEGTVVAITAEAALLDIGFKTEGIIPLTDFQST-G 83 Query: 59 ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 + ++VGD++ V++ D G LSR K +R + W LEKA+ + + G I VKG Sbjct: 84 DT-VKVGDKLPVSIKG-RDPEGYYELSRLKVERPKDWSALEKAFAEKAAILGTITAVVKG 141 Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 G +V++ G+RAF+P S R + L G+E+ ++IKLD ++VV RRAV+E E Sbjct: 142 GVSVDV-GVRAFMPASRSGARDAAEMEKLVGQEIRCRIIKLDVADEDLVVDRRAVLEEEE 200 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVG 238 A ++Q ++EG V G +++LTDYGAFVD+GGVD LLH+ D++W RV P++++NVG Sbjct: 201 RASKEQRYSQVKEGEIVHGTIRSLTDYGAFVDIGGVDALLHVADISWGRVNKPADVLNVG 260 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE 298 D++ K+LK D + R+SLGLKQL PW +A +Y G ++TG VT +TD+G FVE+E+ Sbjct: 261 DKVEAKILKVDPAKKRISLGLKQLQPHPWDLVADKYKVGERVTGSVTRVTDFGAFVELEK 320 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFA 358 G+EGLVH+SEM W+ K P+ +V GD VEV+VL ++ RRISLGLKQ +PW A Sbjct: 321 GIEGLVHLSEMSWSKKIRRPADMVKPGDQVEVVVLGVNAADRRISLGLKQALGDPWADAA 380 Query: 359 ETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAV 418 + G +EG + SI FG F+ + G++G+VH+ DIS K G + A Sbjct: 381 QKLAVGTVIEGPVTSIQKFGAFVQVAEGVEGMVHVGDISAEKRINHPQDVVKVGQVVKAQ 440 Query: 419 VLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYL 478 VL++D E+ R+ LG+KQL + ++A +K+G +VTG++T V + A VEL +GV Sbjct: 441 VLELDVEKRRLRLGMKQLIPTSLDEYIAEHKEGDVVTGRMTDVSSGRAKVELGEGVHATC 500 Query: 479 RASEASRDRVED 490 R + S + E+ Sbjct: 501 RLAAESAPKEEE 512 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 110/362 (30%), Positives = 183/362 (50%), Gaps = 25/362 (6%) Query: 184 QLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 ++ E ++G+E G V +T A +D+G +G++ +TD + + V VGD++ Sbjct: 41 RITEPGKKGLE--GTVVAITAEAALLDIGFKTEGIIPLTDF-----QSTGDTVKVGDKLP 93 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 V + D E LK W A+ K + E + G +T + G V++ GV Sbjct: 94 VSIKGRDPEGYYELSRLKVERPKDWSALEKAFAEKAAILGTITAVVKGGVSVDV--GVRA 151 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEER----RRISLGLKQCKANPWQQFA 358 + S K+V ++ LD+ +E RR L ++ +A+ Q+++ Sbjct: 152 FMPASR-SGARDAAEMEKLVGQEIRCRIIKLDVADEDLVVDRRAVLE-EEERASKEQRYS 209 Query: 359 ETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAV 418 + +G+ V G I+S+TD+G F+ + GG+D L+H++DISW + A GD++ A Sbjct: 210 QV-KEGEIVHGTIRSLTDYGAFVDI-GGVDALLHVADISWGRVNKPA-DVLNVGDKVEAK 266 Query: 419 VLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYL 478 +L+VD ++RISLG+KQL P++ K G VTG VT V GA VEL G+EG + Sbjct: 267 ILKVDPAKKRISLGLKQLQPHPWDLVADKYKVGERVTGSVTRVTDFGAFVELEKGIEGLV 326 Query: 479 RASEAS-RDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAK-----DEADEKDAIA 532 SE S ++ ++ GD+VE GV+ +R ISL ++ +A +K A+ Sbjct: 327 HLSEMSWSKKIRRPADMVKPGDQVEVVVLGVNAADRRISLGLKQALGDPWADAAQKLAVG 386 Query: 533 TV 534 TV Sbjct: 387 TV 388 >UniRef50_A5CF24 30S ribosomal protein S1 n=2 Tax=Orientia tsutsugamushi RepID=A5CF24_ORITB Length = 507 Score = 348 bits (893), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 192/468 (41%), Positives = 284/468 (60%), Gaps = 33/468 (7%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEI 62 ++F +LF + E + + G++V+G VV ID +VV+VD LK+E IP +FK A Sbjct: 38 DNFDELFNKITNE-QIKAGTVVKGKVVEIDDEVVIVDIKLKNEGRIPLSEFKLASDVPLP 96 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 Q+GD VDV ++ +E G T+LSREKA R EAW L++A ++ V GVI GKVKGGFTV Sbjct: 97 QIGDLVDVYVEKIEGRNGCTVLSREKALREEAWSVLDEAQKNGSLVDGVIFGKVKGGFTV 156 Query: 123 ELNGIRAFLPGSLVDVR-PVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 +L+G+ AFLPGS VDVR P+++ L F+++K+D+K N+VVSRRAV+E + Sbjct: 157 DLSGVVAFLPGSQVDVRRPIKNITPLMNIVQPFQILKMDKKLGNIVVSRRAVLEEARAGI 216 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG---------VDGLLHITDMAWKRVKHPS 232 R ++L + GM + G+VK++ YGAF++L G VDGLLH ++ W+++ HP Sbjct: 217 RQEVLSKIHVGMILNGVVKSIVYYGAFIELTGSDELTFDVKVDGLLHSINILWRKINHPG 276 Query: 233 EIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGC 292 E + +G ++ V V+ D ++SLG+KQL +PW I G G+V ++ +YG Sbjct: 277 EELQIGQQVRVVVIGIDISTGQISLGMKQLSANPWDDIENSLQIGDIKVGKVKSIAEYGA 336 Query: 293 FVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN 352 F+E+ + +EGL H + W N +P K + +G V +LDID+ER RISL LK CK N Sbjct: 337 FIEVTKDLEGLCHSGHLGWEKINQNPKKSLTIGQEVVFKILDIDKERHRISLSLKLCKPN 396 Query: 353 PWQQFAETHNKGDRVEGKIKSITDFGIFIGL-----------DGG----------IDGLV 391 PW+ AE + G + +++IT+FG+F+ L DG IDG++ Sbjct: 397 PWEVLAEKYQVGTVIRAPLRNITNFGMFVALSVTTNAVKYEIDGKEYEIGEMTYQIDGMI 456 Query: 392 HLSDI-SWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAE 438 H SDI +++ Y KGDEI +VL VD E+ERI+LG+KQLA+ Sbjct: 457 HESDILKHGDTNSNSLKNYTKGDEIECMVLAVDVEKERINLGIKQLAD 504 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 100/399 (25%), Positives = 180/399 (45%), Gaps = 42/399 (10%) Query: 158 KLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGL 217 K++ + V+SR + E + D+ +N G V G++ G VDL GV Sbjct: 108 KIEGRNGCTVLSREKALREEAWSVLDEAQKN---GSLVDGVIFGKVKGGFTVDLSGVVAF 164 Query: 218 LHITDMAWKR-VKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAK---- 272 L + + +R +K+ + ++N+ ++LK D++ + + + + E+ I + Sbjct: 165 LPGSQVDVRRPIKNITPLMNIVQPF--QILKMDKKLGNIVVSRRAVLEEARAGIRQEVLS 222 Query: 273 RYPEGTKLTGRVTNLTDYGCFVEI--------EEGVEGLVHVSEMDWTNKNIHPSKVVNV 324 + G L G V ++ YG F+E+ + V+GL+H + W N HP + + + Sbjct: 223 KIHVGMILNGVVKSIVYYGAFIELTGSDELTFDVKVDGLLHSINILWRKIN-HPGEELQI 281 Query: 325 GDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLD 384 G V V+V+ ID +ISLG+KQ ANPW + GD GK+KSI ++G FI + Sbjct: 282 GQQVRVVVIGIDISTGQISLGMKQLSANPWDDIENSLQIGDIKVGKVKSIAEYGAFIEVT 341 Query: 385 GGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNW 444 ++GL H + W + + G E+ +L +D ER RISL +K +P+ Sbjct: 342 KDLEGLCHSGHLGWEKINQNPKKSLTIGQEVVFKILDIDKERHRISLSLKLCKPNPWEVL 401 Query: 445 VALNKKGAIVTGKVTAVDAKGATVELA----------DG-----------VEGYLRASEA 483 + G ++ + + G V L+ DG ++G + S+ Sbjct: 402 AEKYQVGTVIRAPLRNITNFGMFVALSVTTNAVKYEIDGKEYEIGEMTYQIDGMIHESDI 461 Query: 484 SR--DRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 + D ++ + GDE+E VD + I+L ++ Sbjct: 462 LKHGDTNSNSLKNYTKGDEIECMVLAVDVEKERINLGIK 500 >UniRef50_Q2GE01 Ribosomal protein S1 n=2 Tax=Neorickettsia RepID=Q2GE01_NEOSM Length = 553 Score = 342 bits (876), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 197/518 (38%), Positives = 299/518 (57%), Gaps = 24/518 (4%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEI 62 E F + EE + R G +V GV+ +I VLV+ GLKSE IP +QF + G LE Sbjct: 28 EDFTTILEERFSDSLIREGDMVEGVIKSISPHFVLVNLGLKSEGKIPVQQFHDL-GTLE- 85 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDA--ETVTGVINGKVKGGF 120 VG ++ V ++ E G G +LS KA + + W L + Y + E V GVI +K G Sbjct: 86 -VGSKIIVYVEKTETGSGNLVLSYTKALKQKVWNRLYEMYLNGSDEDVMGVILYTIKSGC 144 Query: 121 TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 VE+ G+ AFLP S +DVRPV D L G +L+F+++K+D K + VSRR + + + A Sbjct: 145 IVEVEGLNAFLPNSHLDVRPVSDPATLVGVKLKFRILKMDPKTGKIFVSRRKALGAVHEA 204 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDL------GGVDGLLHITDMAWKRVKHPSEI 234 R + + ++EG + G VK++ YG FV + G VDGLL++ D++W RV HPS I Sbjct: 205 ARSEYISTIKEGDIIDGRVKSIASYGVFVQIHESDKVGVVDGLLYVNDISWARVTHPSSI 264 Query: 235 VNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFV 294 +VG E+ VKV+ D E+ R+SLG+KQL E+PW ++K+Y G G VT++ DYG FV Sbjct: 265 YSVGQEVRVKVIAVDPEKGRISLGVKQLTENPWKDVSKKYTPGNVYPGVVTSVEDYGIFV 324 Query: 295 EIEEGVEGLVHVSEMDWTNKN--IHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN 352 +EEGVEGLVH E+ WT + P+ VN VM+L +DEE +I+L +KQC N Sbjct: 325 RLEEGVEGLVHSGEISWTREKPLFLPNSKVN------VMLLSVDEEGHKIALSVKQCSDN 378 Query: 353 PWQQFAETHNKGDRVEGKIKSITDFGIFIG-LDGG---IDGLVHLSDISWNVAGEEAVRE 408 PW++F + + G V+ K+ ITD GI + LD G + G V L++ISW+ + ++ Sbjct: 379 PWKKFLDAYGLGVVVKCKVVEITDSGIVLTLLDPGYSYVRGYVRLANISWSQNPRKELKR 438 Query: 409 YKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATV 468 + GDE+ A ++ V+ +R R+ +K + DPF +++ + I+ KV V+ G + Sbjct: 439 FTIGDEVEAKLVHVNPDRGRVMFNIKYVEYDPFEEFISRVNEKDIINAKVIRVEDDGIYI 498 Query: 469 ELADGVEGYLRASEASRDRV-EDATLVLSVGDEVEAKF 505 E+ +G+E + S+ SR V + + V+ D K Sbjct: 499 EVREGLEFFTAQSDVSRLTVGQHLSFVVCSKDHYSVKL 536 Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 105/368 (28%), Positives = 193/368 (52%), Gaps = 33/368 (8%) Query: 194 EVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERT 253 +V G++ G V++ G++ L + + + V P+ +V V ++ ++LK D + Sbjct: 131 DVMGVILYTIKSGCIVEVEGLNAFLPNSHLDVRPVSDPATLVGV--KLKFRILKMDPKTG 188 Query: 254 RV------SLG-LKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEG-----VE 301 ++ +LG + + +++ K EG + GRV ++ YG FV+I E V+ Sbjct: 189 KIFVSRRKALGAVHEAARSEYISTIK---EGDIIDGRVKSIASYGVFVQIHESDKVGVVD 245 Query: 302 GLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETH 361 GL++V+++ W + HPS + +VG V V V+ +D E+ RISLG+KQ NPW+ ++ + Sbjct: 246 GLLYVNDISWA-RVTHPSSIYSVGQEVRVKVIAVDPEKGRISLGVKQLTENPWKDVSKKY 304 Query: 362 NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVRE---YKKGDEIAAV 418 G+ G + S+ D+GIF+ L+ G++GLVH +ISW RE + ++ + Sbjct: 305 TPGNVYPGVVTSVEDYGIFVRLEEGVEGLVHSGEISWT-------REKPLFLPNSKVNVM 357 Query: 419 VLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADG----V 474 +L VD E +I+L VKQ +++P+ ++ G +V KV + G + L D V Sbjct: 358 LLSVDEEGHKIALSVKQCSDNPWKKFLDAYGLGVVVKCKVVEITDSGIVLTLLDPGYSYV 417 Query: 475 EGYLRASEASRDRVEDATLV-LSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIAT 533 GY+R + S + L ++GDEVEAK V+ + +++ + ++ I+ Sbjct: 418 RGYVRLANISWSQNPRKELKRFTIGDEVEAKLVHVNPDRGRVMFNIKYVEYDPFEEFISR 477 Query: 534 VNKQEDAN 541 VN+++ N Sbjct: 478 VNEKDIIN 485 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 100/346 (28%), Positives = 169/346 (48%), Gaps = 29/346 (8%) Query: 189 LQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLK 247 ++EG V+G++K+++ + V+LG +G + + H + VG +I V V K Sbjct: 43 IREGDMVEGVIKSISPHFVLVNLGLKSEGKIPVQQF------HDLGTLEVGSKIIVYVEK 96 Query: 248 FDRERTRVSLGL-KQLGEDPWVAIAKRYPEGTK--LTGRVTNLTDYGCFVEIEEGVEGLV 304 + + L K L + W + + Y G+ + G + GC VE+E G+ + Sbjct: 97 TETGSGNLVLSYTKALKQKVWNRLYEMYLNGSDEDVMGVILYTIKSGCIVEVE-GLNAFL 155 Query: 305 HVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEER----RRISLGLKQCKANPWQQFAET 360 S +D P+ +V V ++ +D + RR +LG A ++ T Sbjct: 156 PNSHLD-VRPVSDPATLVGVKLKFRILKMDPKTGKIFVSRRKALGAVHEAAR--SEYIST 212 Query: 361 HNKGDRVEGKIKSITDFGIFIGLD-----GGIDGLVHLSDISW-NVAGEEAVREYKKGDE 414 +GD ++G++KSI +G+F+ + G +DGL++++DISW V ++ Y G E Sbjct: 213 IKEGDIIDGRVKSIASYGVFVQIHESDKVGVVDGLLYVNDISWARVTHPSSI--YSVGQE 270 Query: 415 IAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGV 474 + V+ VD E+ RISLGVKQL E+P+ + G + G VT+V+ G V L +GV Sbjct: 271 VRVKVIAVDPEKGRISLGVKQLTENPWKDVSKKYTPGNVYPGVVTSVEDYGIFVRLEEGV 330 Query: 475 EGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 EG + + E S R + L L +V VD + I+LSV+ Sbjct: 331 EGLVHSGEISWTR--EKPLFLP-NSKVNVMLLSVDEEGHKIALSVK 373 Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 66/285 (23%), Positives = 123/285 (43%), Gaps = 15/285 (5%) Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 VG EV V + AV+ G L ++ + W + K Y GV+ G V Sbjct: 266 SVGQEVRVKVIAVDPEKGRISLGVKQLTEN-PWKDVSKKYTPGNVYPGVVTSVEDYGIFV 324 Query: 123 ELN-GIRAFL-PGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 L G+ + G + R L L ++ ++ +D++ + + +S + S+N Sbjct: 325 RLEEGVEGLVHSGEISWTR--EKPLFLPNSKVNVMLLSVDEEGHKIALSVKQC--SDNPW 380 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-----GGVDGLLHITDMAWKR-VKHPSEI 234 ++ L+ G+ VK V +TD G + L V G + + +++W + + + Sbjct: 381 KK--FLDAYGLGVVVKCKVVEITDSGIVLTLLDPGYSYVRGYVRLANISWSQNPRKELKR 438 Query: 235 VNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFV 294 +GDE+ K++ + +R RV +K + DP+ R E + +V + D G ++ Sbjct: 439 FTIGDEVEAKLVHVNPDRGRVMFNIKYVEYDPFEEFISRVNEKDIINAKVIRVEDDGIYI 498 Query: 295 EIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEER 339 E+ EG+E S++ H S VV D V + I +E+ Sbjct: 499 EVREGLEFFTAQSDVSRLTVGQHLSFVVCSKDHYSVKLEIITDEK 543 >UniRef50_D0J9D1 30S ribosomal protein S1 n=25 Tax=Bacteria RepID=D0J9D1_BLASP Length = 606 Score = 332 bits (852), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 172/474 (36%), Positives = 282/474 (59%), Gaps = 7/474 (1%) Query: 5 FAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQV 64 F +++ E+L +I+ I +G + I + ++VD G K+E AIP +F+ +V Sbjct: 51 FEKIYAETLPKIQEL--EIYQGTITHITEKNLIVDIGFKAEGAIPISEFRE---NFNFKV 105 Query: 65 GDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL 124 G++++V + + D G+ +LS +KAK W + +A+E E + G + + KGG +E+ Sbjct: 106 GEKMEVMVVKM-DYKGQCILSYQKAKIMRNWERINEAHEKGEVILGYVAARTKGGLIIEI 164 Query: 125 NGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQ 184 I FLPGS ++V+PVRD GK +E KV+K++QK NVVVS + +IE + +R + Sbjct: 165 FDIECFLPGSHINVKPVRDYDTYVGKTMEVKVVKINQKTKNVVVSHKILIERDIEEQRKE 224 Query: 185 LLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 ++ L +G ++G +KN+ YGAFVDLGGVD LLHITDM+W + HP+E+V + E+ Sbjct: 225 MISKLDKGQVLEGKIKNILPYGAFVDLGGVDALLHITDMSWPHINHPTEVVQLEQELKFV 284 Query: 245 VLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLV 304 VL D+++ RV LGLKQL PW ++ G K+ G+V+ L DYG FVEI GVE L+ Sbjct: 285 VLGVDKDKNRVQLGLKQLQPHPWNSLDNNLKVGNKVKGKVSVLADYGAFVEIIPGVEALL 344 Query: 305 HVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKG 364 H+SEM W+ V +GD +E ++L ID + R++SL +KQ +PW + G Sbjct: 345 HISEMSWSYDLSSTQDFVQIGDEIEAVILTIDRQERKMSLSVKQLTPDPWIDIQNKYPIG 404 Query: 365 DRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDA 424 + G ++ T+FGI + L+ GI G+++ +D+SW + D++ ++L +D Sbjct: 405 SKHVGIVRKFTNFGISLELEKGISGIIYANDLSWGKKIKHPSEFCNINDKLEVIILALDP 464 Query: 425 ERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELA-DGVEGY 477 + R++LG KQ+ E+P+ + + G+I G + + KGA+V+L D +E + Sbjct: 465 QTRRLNLGHKQITENPWEKYEKIYYVGSIHNGFIVNLFDKGASVKLLNDQIEDF 518 >UniRef50_C1SLB2 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SSU ribosomal protein S1P n=2 Tax=Bacteria RepID=C1SLB2_9BACT Length = 848 Score = 327 bits (837), Expect = 9e-88, Method: Compositional matrix adjust. Identities = 197/546 (36%), Positives = 306/546 (56%), Gaps = 12/546 (2%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEI 62 E F + EES ++ E SIV+G V I+++ VLV+ G K+E +P+ +F GE+ I Sbjct: 298 EDFEAMLEESFQQPEKN--SIVQGTVAQINENDVLVNIGFKTEGVVPSAEFMK-DGEITI 354 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 +VGDEVDV + G G LSR+ ++ WI +EKA E+ V + V GFT Sbjct: 355 KVGDEVDVLFLGIAGGGGYVKLSRKAIEKEADWIEVEKALEEETPVEIKVTSVVDKGFTG 414 Query: 123 ELNGIRAFLPGSLVDVR-PVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 + I F+P + +D + + G E KV+K ++K+ + + SR+ + E Sbjct: 415 KCGEIECFIPENHIDFKNSTMEPQEYVGNIYEVKVLKANKKQRSFLASRKLQMIQSIEKE 474 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEI 241 + + ++EG +KG VK + YGAF++ G VDG L ++AW VKHP++ + GDE+ Sbjct: 475 KKEFFSQIEEGQILKGSVKTIKHYGAFMNFGAVDGFLRKNNIAWGVVKHPNQYIEEGDEL 534 Query: 242 TVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVE 301 VK+L D E ++ +GLKQ+ EDPW + +YPEG + G V + G +EIE+G++ Sbjct: 535 EVKILNIDFEEEKLEVGLKQMQEDPWDSAYDKYPEGGTVAGTVVARKNKGFVMEIEQGID 594 Query: 302 GLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETH 361 G + + E+ W KN + + D VE ++ ID+E++++ + LK + NPW H Sbjct: 595 GFIPLEEISWL-KNARIA--IEPKDAVEGKIIGIDDEKKKLIVSLKSIQENPWVTLKTKH 651 Query: 362 NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQ 421 +G ++G IKSITDFGIF+ +DGL+ DISW E YK+GDEI A VL+ Sbjct: 652 PEGSAIKGTIKSITDFGIFVDFGEFLDGLIRKKDISWTDEPENLDELYKEGDEIEAKVLK 711 Query: 422 VDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRAS 481 +DAE+ERISLGVKQL +P+ L G +V KV AV +G VEL + G++ + Sbjct: 712 IDAEKERISLGVKQLETNPWREIGKLLPNGKVVEVKVLAVSKEGLEVELPRDLIGFIPDN 771 Query: 482 EASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADE----KDAIATVNKQ 537 E ++V D T +VGD ++A D + + I LS+R + E K+ + + + Sbjct: 772 ELDVEKV-DPTDKFAVGDTIKAVVFRNDAREKKILLSIRRYMQDSEKREVKEYLKKLAQS 830 Query: 538 EDANFS 543 +D+ FS Sbjct: 831 DDSTFS 836 >UniRef50_Q1IY12 RNA binding S1 n=9 Tax=Deinococci RepID=Q1IY12_DEIGD Length = 587 Score = 326 bits (836), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 169/416 (40%), Positives = 261/416 (62%), Gaps = 6/416 (1%) Query: 21 GSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE-----IQVGDEVDVALDAV 75 G IV G VV I ++ + VD G K E IP Q + LE + GD+++ + V Sbjct: 72 GDIVDGTVVFIGQEGIAVDVGAKVEGIIPLNQIGDEPVTLEQAQQMYKPGDQIEAYVVRV 131 Query: 76 EDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSL 135 + + +LS+++A + + W LE+ E E + KV+GG ++ GIRAFLP S Sbjct: 132 DLANNQIVLSKKRADQDKGWRVLERMQEQDEAFEVEVLEKVRGGLVAQVEGIRAFLPASQ 191 Query: 136 VDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEV 195 VD R V D GK L K+I+L++KRN V++S RA++E++ + R+Q + L G + Sbjct: 192 VDTRRVNDLDPYVGKPLMVKLIELNRKRNRVIISHRAILEAQKAKAREQTIGKLVPGAQF 251 Query: 196 KGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRV 255 +G V +TD+G FV+LGG+DGL+H +++ + R HP ++V VGD++ V+V+ D R R+ Sbjct: 252 EGEVVEITDFGVFVNLGGIDGLVHRSELTYGRFNHPRDVVKVGDKVQVQVIDVDEGRERI 311 Query: 256 SLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKN 315 +L +K L +DPW ++Y G ++ G+VTNLT++G FVE+E G+EGLVHVSEM WT + Sbjct: 312 NLSMKSLTQDPWEGAVEKYHIGQRVRGKVTNLTNFGAFVELEPGLEGLVHVSEMSWTKRV 371 Query: 316 IHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSIT 375 HP++V+ GD VE ++L ID + RRISLG++Q +PW + + G V+GKI +T Sbjct: 372 RHPNEVLKEGDEVEAVILRIDPKERRISLGIRQTTDDPWSALPDRYPPGTPVKGKITGMT 431 Query: 376 DFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISL 431 DFG+F+ ++ GI+GL+H+S++ A +KKGDEI AV+L +D +R SL Sbjct: 432 DFGVFMEIEEGIEGLIHISELDTQRVNNPA-DLFKKGDEIEAVILNIDPVEQRASL 486 Score = 198 bits (503), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 128/387 (33%), Positives = 211/387 (54%), Gaps = 25/387 (6%) Query: 145 LHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQ---LLENLQE---GMEVKGI 198 ++ G ++E V+++D N +V+S++ A++D+ +LE +QE EV+ + Sbjct: 117 MYKPGDQIEAYVVRVDLANNQIVLSKK-------RADQDKGWRVLERMQEQDEAFEVEVL 169 Query: 199 VKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLG 258 K G + G+ L + + +RV V G + VK+++ +R+R RV + Sbjct: 170 EK--VRGGLVAQVEGIRAFLPASQVDTRRVNDLDPYV--GKPLMVKLIELNRKRNRVIIS 225 Query: 259 LKQLGEDPWV-----AIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTN 313 + + E I K P G + G V +TD+G FV + G++GLVH SE+ + Sbjct: 226 HRAILEAQKAKAREQTIGKLVP-GAQFEGEVVEITDFGVFVNLG-GIDGLVHRSELTYGR 283 Query: 314 KNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKS 373 N HP VV VGD V+V V+D+DE R RI+L +K +PW+ E ++ G RV GK+ + Sbjct: 284 FN-HPRDVVKVGDKVQVQVIDVDEGRERINLSMKSLTQDPWEGAVEKYHIGQRVRGKVTN 342 Query: 374 ITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGV 433 +T+FG F+ L+ G++GLVH+S++SW K+GDE+ AV+L++D + RISLG+ Sbjct: 343 LTNFGAFVELEPGLEGLVHVSEMSWTKRVRHPNEVLKEGDEVEAVILRIDPKERRISLGI 402 Query: 434 KQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATL 493 +Q +DP++ G V GK+T + G +E+ +G+EG + SE RV + Sbjct: 403 RQTTDDPWSALPDRYPPGTPVKGKITGMTDFGVFMEIEEGIEGLIHISELDTQRVNNPAD 462 Query: 494 VLSVGDEVEAKFTGVDRKNRAISLSVR 520 + GDE+EA +D + SLS R Sbjct: 463 LFKKGDEIEAVILNIDPVEQRASLSRR 489 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 70/248 (28%), Positives = 118/248 (47%), Gaps = 18/248 (7%) Query: 20 PGSIVRGVVVAIDKDVVLVDAG----LKSESAIPAEQFKNAQGELEIQVGDEVDVALDAV 75 PG+ G VV I V V+ G L S + +F + + ++VGD+V V + V Sbjct: 247 PGAQFEGEVVEITDFGVFVNLGGIDGLVHRSELTYGRFNHPRDV--VKVGDKVQVQVIDV 304 Query: 76 EDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFLPGS 134 ++G LS K+ + W + Y + V G + G VEL G+ + S Sbjct: 305 DEGRERINLSM-KSLTQDPWEGAVEKYHIGQRVRGKVTNLTNFGAFVELEPGLEGLVHVS 363 Query: 135 LVD----VRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQ 190 + VR + L EG E+E ++++D K + + R + SA L + Sbjct: 364 EMSWTKRVRHPNEVLK-EGDEVEAVILRIDPKERRISLGIRQTTDDPWSA----LPDRYP 418 Query: 191 EGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFD 249 G VKG + +TD+G F+++ G++GL+HI+++ +RV +P+++ GDEI +L D Sbjct: 419 PGTPVKGKITGMTDFGVFMEIEEGIEGLIHISELDTQRVNNPADLFKKGDEIEAVILNID 478 Query: 250 RERTRVSL 257 R SL Sbjct: 479 PVEQRASL 486 >UniRef50_C7LJY0 Putative ribosomal protein S1 n=1 Tax=Candidatus Sulcia muelleri SMDSEM RepID=C7LJY0_SULMS Length = 648 Score = 320 bits (819), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 166/465 (35%), Positives = 284/465 (61%), Gaps = 8/465 (1%) Query: 9 FEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEV 68 + E+L+ IE I +G ++ + V++D G K+E IP +F+ + + ++ D + Sbjct: 53 YTENLQRIEEF--YIYKGKIIQLIDRNVIIDIGFKAEGLIPFNEFR--ENKKFPKINDII 108 Query: 69 DVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIR 128 +V ++ + D G+ ++S KAK+ ++W ++ +++ E + + + KGG V L GI Sbjct: 109 EVIVEKL-DYKGKLIISYNKAKKLKSWERIQNSWKKNEIIIFFVTARTKGGLIVVLFGIE 167 Query: 129 AFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLEN 188 FLPGS ++ +PV+D + G+ +E K++K++ K NVVVS + ++E + E+ +L+ Sbjct: 168 CFLPGSQIEKKPVKDFDYYVGQTMEGKIVKINNKTKNVVVSHKILLEKD--LEKKKLISQ 225 Query: 189 LQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLK 247 L++G + GIVKNLT YG+F+D+GG +DGL HITD++W+R+ HPSE + VG I +L Sbjct: 226 LEKGQILIGIVKNLTHYGSFIDVGGGIDGLCHITDISWERIDHPSEKLEVGQIINFVILS 285 Query: 248 FDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVS 307 D+ + RV LGLKQL +PW+ K+ +G L G V+ +TDYG FVE+ GVEGLVHVS Sbjct: 286 IDQIKNRVQLGLKQLQTNPWIHFEKKLKKGKVLIGTVSVVTDYGAFVELFPGVEGLVHVS 345 Query: 308 EMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRV 367 EM W + V +G+ V++++L+++ +++SL +K+ +PW+ + G R Sbjct: 346 EMSWHQQLKSAKNFVKIGEKVKILILNLEHSAQKMSLSMKRLSPDPWENIENKYPLGTRN 405 Query: 368 EGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERE 427 G +KS T+ G+ + L+ GI+GL++ SDISW + + YKKGD + +VL +D Sbjct: 406 IGTVKSFTNCGVRLELEPGIEGLLYNSDISWTEKIKSGLDIYKKGDLVQLIVLGLDVMTR 465 Query: 428 RISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELAD 472 +++ G KQL ++P+ N + G+I GK+ +KG V+ + Sbjct: 466 KLNFGCKQLTKNPWENLEQIFPIGSIQIGKIIKFFSKGVIVKFNE 510 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 102/355 (28%), Positives = 183/355 (51%), Gaps = 10/355 (2%) Query: 173 VIESENSAERDQLLENLQEGMEVKGIVKNL----TDYGAFVDLGGVDGLLHITDMAWKRV 228 +I S N A++ + E +Q + I+ T G V L G++ L + + K V Sbjct: 121 LIISYNKAKKLKSWERIQNSWKKNEIIIFFVTARTKGGLIVVLFGIECFLPGSQIEKKPV 180 Query: 229 KHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPW--VAIAKRYPEGTKLTGRVTN 286 K VG + K++K + + V + K L E + + +G L G V N Sbjct: 181 KDFD--YYVGQTMEGKIVKINNKTKNVVVSHKILLEKDLEKKKLISQLEKGQILIGIVKN 238 Query: 287 LTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGL 346 LT YG F+++ G++GL H++++ W + HPS+ + VG ++ ++L ID+ + R+ LGL Sbjct: 239 LTHYGSFIDVGGGIDGLCHITDISWERID-HPSEKLEVGQIINFVILSIDQIKNRVQLGL 297 Query: 347 KQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAV 406 KQ + NPW F + KG + G + +TD+G F+ L G++GLVH+S++SW+ + A Sbjct: 298 KQLQTNPWIHFEKKLKKGKVLIGTVSVVTDYGAFVELFPGVEGLVHVSEMSWHQQLKSAK 357 Query: 407 REYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGA 466 K G+++ ++L ++ +++SL +K+L+ DP+ N G G V + G Sbjct: 358 NFVKIGEKVKILILNLEHSAQKMSLSMKRLSPDPWENIENKYPLGTRNIGTVKSFTNCGV 417 Query: 467 TVELADGVEGYLRASEAS-RDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 +EL G+EG L S+ S ++++ + GD V+ G+D R ++ + Sbjct: 418 RLELEPGIEGLLYNSDISWTEKIKSGLDIYKKGDLVQLIVLGLDVMTRKLNFGCK 472 >UniRef50_B0SDL5 30S Ribosomal protein S1 n=6 Tax=Leptospira RepID=B0SDL5_LEPBA Length = 566 Score = 319 bits (817), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 196/549 (35%), Positives = 315/549 (57%), Gaps = 23/549 (4%) Query: 2 TESFAQLFE--ESLKEIETR-----PGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK 54 T SF +L E ES + + + G+++ G VV + D V +D G K E+ + E F Sbjct: 13 TTSFGELLEKWESQSQAQEQENSAGKGTLIEGTVVDVIGDTVFLDIGEKLEARVSREDFS 72 Query: 55 NAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVING 114 + G++V + DG+ +LS+++A + W T++ A ++ ++G I G Sbjct: 73 ETP-----KRGEKVSAIIKKRVDGY--CVLSKKEADQRVGWETIKDASQNGYPLSGKIVG 125 Query: 115 KVKG-GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAV 173 +VK G+ VE GI+ FLP S V VR T GKE FK+I+L++K VVSR+ + Sbjct: 126 EVKNKGYLVESEGIQLFLPASHVGVRFKESTEG--GKEFSFKIIELNEKTRTGVVSRKTL 183 Query: 174 IESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSE 233 ++ N + ++LL ++ G +V G V + ++G F+ + V GLL D+++K+ + Sbjct: 184 LDEINGEKWEELLGKVKVGDKVNGKVVKIANFGVFLSVYDVVGLLRQNDISYKKFAPFKQ 243 Query: 234 IVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCF 293 N+G E+ V VL+ D+E ++SLG+KQL EDPW K +G + G VT+LT++G F Sbjct: 244 YFNIGAEVEVIVLEVDKENNKLSLGIKQLYEDPWAWAKKELEKGMVVRGIVTSLTNFGAF 303 Query: 294 VEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP 353 VE++EG+EGL+H +E+ W K HP V+ G V+ +LDID E RR+SLGLKQ NP Sbjct: 304 VELKEGLEGLIHTTELSWAKKPPHPKDVLKKGQEVDSEILDIDFEARRLSLGLKQLLPNP 363 Query: 354 WQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGD 413 W+ + G+ +EGKI IT +G F+ ++ GI+GL+H+SDI+W+ + + KKG Sbjct: 364 WEALSANVRAGNVLEGKITGITKYGAFVEVESGIEGLIHISDITWDEKEKNPLNLLKKGQ 423 Query: 414 EIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKK---GAIVTGKVTAVDAKGATVEL 470 + +L V+ + +RIS G+KQL+E P+ AL KK G +V G+V ++ + G VE+ Sbjct: 424 SVQYKILDVNLDAQRISCGLKQLSEHPYE---ALRKKYPPGTLVEGRVKSIVSFGVFVEV 480 Query: 471 ADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDA 530 G EG + SE R + VGD V ++ N+ ISLS++ D+A E++ Sbjct: 481 EPGYEGLVHISEIPDGRNIKLEDLYKVGDSVRTVVVKIEPNNKKISLSIKDFDKAVEREE 540 Query: 531 IATVNKQED 539 +A K+++ Sbjct: 541 MAKYMKEDN 549 >UniRef50_Q0PQN6 30S ribosomal subunit protein S1 (Fragment) n=2 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=Q0PQN6_9GAMM Length = 283 Score = 317 bits (811), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 147/182 (80%), Positives = 169/182 (92%), Gaps = 1/182 (0%) Query: 138 VRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKG 197 VRPVRDT +LEGK+LEFKVIKLD++RNNVVVSRRAV+E E SAER++LLENLQEG E+KG Sbjct: 62 VRPVRDTAYLEGKDLEFKVIKLDRRRNNVVVSRRAVVEQEYSAEREKLLENLQEGQELKG 121 Query: 198 IVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSL 257 +VKNLTDYGAFVDLGG+DGLLHITDMAWKRVKHPS++V +GDEITVKVLKFDRER RVSL Sbjct: 122 VVKNLTDYGAFVDLGGIDGLLHITDMAWKRVKHPSDVVQIGDEITVKVLKFDRERNRVSL 181 Query: 258 GLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIH 317 GLKQ+G+DPWVA+A+RYPE T+L G+VTN+ DYGCFVEIEEGVEGLVHVSEMD ++ H Sbjct: 182 GLKQMGDDPWVALARRYPESTRLFGKVTNIADYGCFVEIEEGVEGLVHVSEMD-LDQQEH 240 Query: 318 PS 319 PS Sbjct: 241 PS 242 Score = 124 bits (312), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 65/163 (39%), Positives = 102/163 (62%), Gaps = 6/163 (3%) Query: 238 GDEITVKVLKFDRERTRVSLGLKQLGEDPWVA----IAKRYPEGTKLTGRVTNLTDYGCF 293 G ++ KV+K DR R V + + + E + A + + EG +L G V NLTDYG F Sbjct: 73 GKDLEFKVIKLDRRRNNVVVSRRAVVEQEYSAEREKLLENLQEGQELKGVVKNLTDYGAF 132 Query: 294 VEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP 353 V++ G++GL+H+++M W + HPS VV +GD + V VL D ER R+SLGLKQ +P Sbjct: 133 VDLG-GIDGLLHITDMAW-KRVKHPSDVVQIGDEITVKVLKFDRERNRVSLGLKQMGDDP 190 Query: 354 WQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDI 396 W A + + R+ GK+ +I D+G F+ ++ G++GLVH+S++ Sbjct: 191 WVALARRYPESTRLFGKVTNIADYGCFVEIEEGVEGLVHVSEM 233 Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 61/169 (36%), Positives = 96/169 (56%), Gaps = 9/169 (5%) Query: 355 QQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDE 414 ++ E +G ++G +K++TD+G F+ L GGIDGL+H++D++W + + GDE Sbjct: 107 EKLLENLQEGQELKGVVKNLTDYGAFVDL-GGIDGLLHITDMAWKRVKHPS-DVVQIGDE 164 Query: 415 IAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVT---GKVTAVDAKGATVELA 471 I VL+ D ER R+SLG+KQ+ +DP WVAL ++ T GKVT + G VE+ Sbjct: 165 ITVKVLKFDRERNRVSLGLKQMGDDP---WVALARRYPESTRLFGKVTNIADYGCFVEIE 221 Query: 472 DGVEGYLRASEASRDRVEDATLV-LSVGDEVEAKFTGVDRKNRAISLSV 519 +GVEG + SE D+ E + S + + ++ A+SLSV Sbjct: 222 EGVEGLVHVSEMDLDQQEHPSCPKWSPWVTRWRSWCWISTRSAAVSLSV 270 >UniRef50_B2S2M7 Ribosomal protein S1 n=5 Tax=Bacteria RepID=B2S2M7_TREPS Length = 863 Score = 315 bits (806), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 189/524 (36%), Positives = 284/524 (54%), Gaps = 18/524 (3%) Query: 20 PGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGF 79 PGS+ G VV ++ V VD G KSE +P E+F E + GD V V ++ V + Sbjct: 321 PGSVRMGTVVQVNAGTVFVDIGGKSEGRVPVEEF-----EAPPKAGDGVRVYVERVTP-Y 374 Query: 80 GETLLSREKAKRHEAWITLEKAYEDAETVTGVIN--GKVKGGFTVELN-GIRAFLPGSLV 136 G L S+ KA R + L A D V G I + K GF V+L G+ AFLP S Sbjct: 375 GPEL-SKTKADRLGLKVKLRDAERDGTPVEGRIVRLTEKKSGFEVDLGAGMMAFLPISQS 433 Query: 137 DVRPVRDTLHLEGKELEFKVIKLDQKR-----NNVVVSRRAVIESENSAERDQLLENLQE 191 D + V L G +F + ++ Q + +N+V++RR +E R++ ++ Sbjct: 434 DCQKVDAPESLIGLTSKFYIERISQSKQHRGNDNIVINRRRYLEERARQAREEFFNSVHI 493 Query: 192 GMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRE 251 V G+VK+ T +GAF+DLGG DGLLH+ DM+W V P E V G I +KV++ D+ Sbjct: 494 EDSVSGVVKSFTSFGAFIDLGGFDGLLHVNDMSWGHVARPREFVKKGQTIELKVIRLDQA 553 Query: 252 RTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDW 311 R++L LK DPW+ ++ + GRVT + D+G F+E+ EG+EGL H+SE W Sbjct: 554 EKRINLSLKHFQPDPWLEFENKFGVNDVVKGRVTKIADFGAFIELAEGIEGLAHISEFSW 613 Query: 312 TNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKI 371 K PS +V +GD VE M+L D + R+SLGLKQ ANPW++ + G R +I Sbjct: 614 VKKTSKPSDMVKIGDEVECMILGYDIQAGRVSLGLKQVTANPWEEIEARYPVGARFTRRI 673 Query: 372 KSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISL 431 +T+ G FI ++ GIDG +H+ D+SW A E + G EI +V++ D + RI L Sbjct: 674 VKVTNAGAFIEMEEGIDGFLHVDDLSWVKRTRPADHELEVGKEIECMVIECDPQARRIRL 733 Query: 432 GVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDA 491 GVKQL+++P+ + G+ V G+V++V G V + GVEG +R +R D Sbjct: 734 GVKQLSDNPWQVFANAYGVGSTVEGEVSSVTDFGIFVRVPGGVEGLVRKQHLVENRDGDP 793 Query: 492 TLVL---SVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIA 532 L +VGD V+A ++ K+R ++ SVR ++D ++ Sbjct: 794 GEALRKYAVGDRVKAVIVDMNVKDRKVAFSVRDYQRKVQRDELS 837 >UniRef50_C0QZM2 30S ribosomal protein S1 n=2 Tax=Brachyspira RepID=C0QZM2_BRAHW Length = 554 Score = 296 bits (757), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 188/550 (34%), Positives = 311/550 (56%), Gaps = 21/550 (3%) Query: 5 FAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQV 64 F + EES +R G IV+G VV D V +D KSE I +F + E + Sbjct: 14 FRKALEESDNTFLSR-GKIVKGKVVQFDDTDVFIDFDSKSEGKIKRSEF-----DKEPTI 67 Query: 65 GDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL 124 G+E++ A+ + ED G +LS+ + + ++ ++ A ++ +TGV+ +KGGF V + Sbjct: 68 GEEIE-AIVSGEDDKGYVILSKSEIDKRKSQELIDNAVKNNTAITGVVKEVIKGGFKVSI 126 Query: 125 NGIRAFLPGSLVDV-RPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERD 183 G +AF P S +D+ R +++ ++ GKE EF+VIK + + +VVVSRR ++E +A + Sbjct: 127 MGHQAFCPFSQIDLARGIKEADYI-GKEYEFRVIKKNGR--DVVVSRRVLLEETQNAGIE 183 Query: 184 QLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 L NL+E + G VKN+ +GAF+++ G DG L I +M+W +V +P +++ G+E Sbjct: 184 TFLNNLKENDIINGKVKNIEKFGAFIEITPGFDGFLAIPNMSWDKVVNPKSVISKGEERM 243 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 KVL D+E +V LGLKQL EDPW ++Y G + G VTN+ +G FV++ +G+EG Sbjct: 244 FKVLHIDKENRKVDLGLKQLDEDPWGKFVEQYHIGDIINGEVTNVKKFGAFVKVADGIEG 303 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHN 362 LVHVS++ W + +PS V G +E +LD++ R+++LGLKQ K NPW + Sbjct: 304 LVHVSDLSWNSHVNNPSDFVKKGAFLECKILDMNAAERKLTLGLKQVKENPWDTVEKDFP 363 Query: 363 KGDRVEGKIKSIT-DFGIFIGLDGGIDGLVHLSDISW--NVAGEEAVREY-KKGDEIAAV 418 V+ K+K I +F +F L G++G+ +SD W N+ +++Y K+G+E+ V Sbjct: 364 VKSAVKCKVKRIIKNFAVF-ELPNGLEGICDISDFDWRNNIVN---MKDYVKEGEEVNMV 419 Query: 419 VLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYL 478 ++ +D +++RI L K + P+ + + +G+IV G V A+ GA V L D +EGY+ Sbjct: 420 IMSIDRDKQRIKLSYKHTKDSPWRLFEKAHPQGSIVDGTVKAIVDSGAIVSLEDDLEGYM 479 Query: 479 RASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEA-DEKDAIATVNKQ 537 S+ + V+ VG+ V++ R ISLS R EA ++K+ ++K Sbjct: 480 HVSQVEIPKGSTLEEVVKVGETYPFVVREVNQSKRRISLSRREYMEAQNKKETQNYISKA 539 Query: 538 EDANFSNNAM 547 E + + N Sbjct: 540 EPTSLTYNPF 549 >UniRef50_P46836 30S ribosomal protein S1 n=166 Tax=Actinobacteria (class) RepID=RS1_MYCLE Length = 481 Score = 295 bits (755), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 161/359 (44%), Positives = 231/359 (64%), Gaps = 7/359 (1%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK---NAQG 58 +E F ++++K G IV G +V +D+D VL+D G K+E IPA + + Sbjct: 19 SEDFLAAIDKTIKYFND--GDIVEGTIVKVDRDEVLLDIGYKTEGVIPARELSIKHDVDP 76 Query: 59 ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 + VGDEV+ + ED G +LS+++A+ AW T+E E E V G++ VKG Sbjct: 77 NEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALKEKDEAVKGIVIEVVKG 136 Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 G +++ G+R FLP SLV++R VRD GKE+E K+I+LD+ RNNVV+SRRA +E Sbjct: 137 GLILDI-GLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNRNNVVLSRRAWLEQTQ 195 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVG 238 S R + L LQ+G KG+V ++ ++GAFVDLGGVDGL+H+++++WK + HPSE+V VG Sbjct: 196 SEVRSEFLNQLQKGAIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWKHIDHPSEVVQVG 255 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE 298 +E+TV+VL D +R RVSL LK EDPW A+ + G + G+VT L +G FV +EE Sbjct: 256 NEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGKVTKLVPFGAFVRVEE 315 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQF 357 G+EGLVH+SE+ + + P +VV VGD V V+DID ERRRISL LKQ + ++F Sbjct: 316 GIEGLVHISELAERHVEV-PDQVVAVGDDAMVKVIDIDLERRRISLSLKQANEDYIEEF 373 Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 107/304 (35%), Positives = 167/304 (54%), Gaps = 31/304 (10%) Query: 149 GKELEFKVIKLDQKRNNVVVSR-RAVIESENSAERDQLLENLQEGME-VKGIVKNLTDYG 206 G E+E V+ + K +++S+ RA E +E L+E E VKGIV + G Sbjct: 83 GDEVEALVLTKEDKEGRLILSKKRAQYERAWGT-----IEALKEKDEAVKGIVIEVVKGG 137 Query: 207 AFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLG----LKQL 262 +D+G + G L + + +RV+ + G EI K+++ D+ R V L L+Q Sbjct: 138 LILDIG-LRGFLPASLVEMRRVRDLQPYI--GKEIEAKIIELDKNRNNVVLSRRAWLEQT 194 Query: 263 GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVV 322 + + +G G V+++ ++G FV++ GV+GLVHVSE+ W + + HPS+VV Sbjct: 195 QSEVRSEFLNQLQKGAIRKGVVSSIVNFGAFVDLG-GVDGLVHVSELSWKHID-HPSEVV 252 Query: 323 NVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIG 382 VG+ V V VLD+D +R R+SL LK + +PW+ FA TH G V GK+ + FG F+ Sbjct: 253 QVGNEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGKVTKLVPFGAFVR 312 Query: 383 LDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAV-------VLQVDAERERISLGVKQ 435 ++ GI+GLVH+S++ A R + D++ AV V+ +D ER RISL +KQ Sbjct: 313 VEEGIEGLVHISEL--------AERHVEVPDQVVAVGDDAMVKVIDIDLERRRISLSLKQ 364 Query: 436 LAED 439 ED Sbjct: 365 ANED 368 Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 102/349 (29%), Positives = 182/349 (52%), Gaps = 15/349 (4%) Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEI 241 D+ ++ +G V+G + + +D+G +G++ +++ K P+E+V+VGDE+ Sbjct: 27 DKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTEGVIPARELSIKHDVDPNEVVSVGDEV 86 Query: 242 TVKVLKFDRERTRVSLGLKQLG-EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV 300 VL + + R+ L K+ E W I + + G V + G ++I G+ Sbjct: 87 EALVLTKEDKEGRLILSKKRAQYERAWGTIEALKEKDEAVKGIVIEVVKGGLILDI--GL 144 Query: 301 EGLVHVSEMDWTN-KNIHPSKVVNVGDVVEVMVLDIDEERRRISLG----LKQCKANPWQ 355 G + S ++ +++ P +G +E ++++D+ R + L L+Q ++ Sbjct: 145 RGFLPASLVEMRRVRDLQPY----IGKEIEAKIIELDKNRNNVVLSRRAWLEQTQSEVRS 200 Query: 356 QFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEI 415 +F KG +G + SI +FG F+ L GG+DGLVH+S++SW + + G+E+ Sbjct: 201 EFLNQLQKGAIRKGVVSSIVNFGAFVDL-GGVDGLVHVSELSWKHI-DHPSEVVQVGNEV 258 Query: 416 AAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVE 475 VL VD +RER+SL +K EDP+ ++ + G IV GKVT + GA V + +G+E Sbjct: 259 TVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGKVTKLVPFGAFVRVEEGIE 318 Query: 476 GYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDE 524 G + SE + VE V++VGD+ K +D + R ISLS++ +E Sbjct: 319 GLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISLSLKQANE 367 >UniRef50_D0RRD0 30S ribosomal protein S1 n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RRD0_9RICK Length = 570 Score = 294 bits (753), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 179/533 (33%), Positives = 306/533 (57%), Gaps = 14/533 (2%) Query: 5 FAQLFEESLKEIETRPGSIVRGVVVAID-KDVVLVDAGLKSESAIPAEQFKNAQGELE-I 62 FA+L E+L+ I + SIV G V +D K V + G KS + + +A EL+ + Sbjct: 18 FAKLITENLENIILKDNSIVTGSVEKVDDKYVHVFIKGAKSSGLVDINEIPHA--ELDGL 75 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 + G E++V L+ ED G +LS EKA+R ++W +E+A+E E V+G+I VKGG V Sbjct: 76 EEGKEIEVFLERTEDRNGNIVLSIEKARRAKSWKKIEEAFEKQEKVSGIIKNTVKGGVVV 135 Query: 123 ELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 E+ G+ AF P S V RP+++ K +EF++IK+D R NV+ SRR VIE E + + Sbjct: 136 EIFGVFAFCPNSQVADRPIKNMNEYMNKPMEFQIIKIDNVRMNVIASRRQVIEQEKNKNK 195 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 +++++N + G V+G +K + YG FV + +D LLH ++++ ++ + +++ VG++I Sbjct: 196 EKVIKNYKVGDVVEGTIKAVQSYGCFVSIESLDCLLHSSEVSHLKISNLNDMFTVGEKIK 255 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 VKVL+ D E R+SL +K + DP+ I ++ G + ++ LTD+G F E++EG+ G Sbjct: 256 VKVLEIDNENMRMSLSVKAMLPDPFETIKDKFSIGNEYEVKIVKLTDFGAFAEMQEGIVG 315 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHN 362 L+H SE+ KN++P +GD V+V + ++D E+R+I+L K C NP +F + + Sbjct: 316 LIHTSEIKHMQKNVNPKSAFKIGDTVKVKLKEVDTEKRKIALSYKDCLPNPVDEFIKKYP 375 Query: 363 KGDRVEGKIKSITDFGIFIGL-DGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQ 421 G V+ K+ + DFGIF D ID VH + + +A+ + KGDE+ + Sbjct: 376 IGTTVKTKVVTKKDFGIFCNTGDNDIDIFVHYKQLDY-AESSKALDNFNKGDEVELKI-- 432 Query: 422 VDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGY---L 478 +D + ++++ ++ L +DPF ++ K G IV+ +V V G V++ G E Y + Sbjct: 433 IDIKDDKVNGSIRALKKDPF-SFFDDKKIGDIVSTRVVEVQDNGLKVDV--GPERYQTII 489 Query: 479 RASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAI 531 R SE + ++ + S GD ++A +D + R + LSV+ ++ +AI Sbjct: 490 RKSELALEKSDQRPNRFSSGDSIDAAILELDAEKRRVKLSVKKLEQQQADEAI 542 >UniRef50_Q1V1Q4 30S ribosomal protein S1 n=3 Tax=Candidatus Pelagibacter RepID=Q1V1Q4_PELUB Length = 576 Score = 294 bits (752), Expect = 7e-78, Method: Compositional matrix adjust. Identities = 179/549 (32%), Positives = 305/549 (55%), Gaps = 28/549 (5%) Query: 2 TESFAQLFEESL-KEIETRPGSIVRGVVVAIDKDVVLVD-AGLKSESAIPAEQFKNAQGE 59 ++ F QL K G I+ GVV + + V ++ GLKSE + + K+ Sbjct: 12 SKEFEQLLNSQFTKTANLEEGKIITGVVNKVTDNFVFLEVPGLKSEPILDINELKSMGML 71 Query: 60 LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGG 119 + +VG+++ V L+ +ED GE L+S KA++ + W L +AYE E + G I G+VKGG Sbjct: 72 DKAKVGEKISVLLERLEDKKGEVLVSASKAQKIQGWDKLVEAYEKNEPIMGKITGRVKGG 131 Query: 120 FTVEL--NGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESE 177 VE G FLPGS + +P++D HL + +F +IKLD+ R N VSRR +I S Sbjct: 132 CIVEHIDTGSLMFLPGSQISDKPLKDISHLMNEPQKFALIKLDKVRGNACVSRREIISSF 191 Query: 178 NSAERDQLLENLQEGMEVKGI-VKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIV 235 ++ +++E + G +KG VK + +G F + G +D L+H+ ++++ RV HP E+ Sbjct: 192 KKEDKIKIVEKFKVGDIIKGAEVKGYSSFGCFFSVNGELDVLVHLQEISYSRVNHPDEVF 251 Query: 236 NVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVE 295 +G++ +KV+ D E+ +V +KQL DP+ I+ Y +V L D+G F E Sbjct: 252 TIGEKHDLKVISVDLEKLQVGCSVKQLTPDPFENIS-NYELNKIYKVKVVKLMDFGAFCE 310 Query: 296 IEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQ 355 +E+G+ L+H SE+ WT KNI K+ VGD ++ ++ +ID+E+RR+++ + NP++ Sbjct: 311 LEKGLSTLLHSSELSWTKKNISAKKMFKVGDEIDCVITEIDKEKRRVAISHRLTTDNPFE 370 Query: 356 QFAETHNKGDRVEGKIKSITDFGIFIGLDG-GIDGLVHLSDISWNVAGEEAVREYKKGDE 414 F +T+ G VEG++ S ++ IF+ +DG ID +H +D+++ GEE + +YK GD+ Sbjct: 371 TFEKTYPIGSEVEGEVASKNEYSIFLKVDGLDIDAFLHCNDLTYLNNGEEELAKYKIGDK 430 Query: 415 IAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGV 474 + VL+V A +++ +G++Q DPF +W K +T K+ + D KG V +G Sbjct: 431 LKVKVLEVKAAEQKVRVGLRQTQPDPF-DWFNDKKVKQTITVKIISTDNKGLVVR-PEGC 488 Query: 475 EGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAI----------SLSVRAKDE 524 E ++ + + ++ D A+FTG +R + AI +LS++ +E Sbjct: 489 EMDF--------IIKKSAIAINAADARPARFTGGERIDCAIQELDIDKRKATLSIKLLEE 540 Query: 525 ADEKDAIAT 533 + K A+ T Sbjct: 541 IERKVALDT 549 >UniRef50_UPI0001C3232B RNA binding S1 domain protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3232B Length = 529 Score = 289 bits (740), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 155/335 (46%), Positives = 227/335 (67%), Gaps = 5/335 (1%) Query: 21 GSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQF---KNAQGELEIQVGDEVDVALDAVED 77 G +V G VV IDKD VLVD G KSE IP+ + K+ + E+++G+EVD + ED Sbjct: 41 GDVVTGHVVRIDKDEVLVDIGYKSEGVIPSNELSIRKSVDPKDEVEMGEEVDALVLTKED 100 Query: 78 GFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVD 137 G +LS+++A+ +AW +E A E E V G + VKGG ++L G+R FLP SLVD Sbjct: 101 QDGRLILSKKRARFEKAWRRIEAAAESGEPVDGTVIEVVKGGLIIDL-GVRGFLPASLVD 159 Query: 138 VRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKG 197 +R V G+ +E +VI+L++ RNNVV+SRRAV+E + +R+++L+ LQ GM V+G Sbjct: 160 IRRVPHLDEYLGQTIECRVIELNRSRNNVVLSRRAVLEEQRREDRERILDRLQPGMIVEG 219 Query: 198 IVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSL 257 + N+ D+GAFVDL G+DGL+HI++++W V HPSEI+++GD ++VKVL DR+R R+SL Sbjct: 220 TISNIVDFGAFVDLDGIDGLIHISELSWSHVNHPSEILSIGDTVSVKVLDIDRDRQRISL 279 Query: 258 GLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIH 317 GLKQ EDPW + Y G +L GRVT + +G FVEI +GVEGLVH+SE+ + + Sbjct: 280 GLKQTQEDPWQRVVDTYNVGDELEGRVTKVVTFGAFVEILDGVEGLVHISELAQHHVE-N 338 Query: 318 PSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN 352 P +++ D V+V +L+ID ERRR+SL +K+ + Sbjct: 339 PREIIQPNDEVKVKILEIDSERRRLSLSIKRVEGQ 373 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 104/344 (30%), Positives = 173/344 (50%), Gaps = 13/344 (3%) Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEI 241 D L +EG V G V + VD+G +G++ +++ ++ P + V +G+E+ Sbjct: 32 DATLTPFEEGDVVTGHVVRIDKDEVLVDIGYKSEGVIPSNELSIRKSVDPKDEVEMGEEV 91 Query: 242 TVKVLKFDRERTRVSLGLKQLG-EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV 300 VL + + R+ L K+ E W I G + G V + G +++ GV Sbjct: 92 DALVLTKEDQDGRLILSKKRARFEKAWRRIEAAAESGEPVDGTVIEVVKGGLIIDL--GV 149 Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLG----LKQCKANPWQQ 356 G + S +D P +G +E V++++ R + L L++ + ++ Sbjct: 150 RGFLPASLVDIRRV---PHLDEYLGQTIECRVIELNRSRNNVVLSRRAVLEEQRREDRER 206 Query: 357 FAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIA 416 + G VEG I +I DFG F+ LDG IDGL+H+S++SW+ + GD ++ Sbjct: 207 ILDRLQPGMIVEGTISNIVDFGAFVDLDG-IDGLIHISELSWSHVNHPS-EILSIGDTVS 264 Query: 417 AVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEG 476 VL +D +R+RISLG+KQ EDP+ V G + G+VT V GA VE+ DGVEG Sbjct: 265 VKVLDIDRDRQRISLGLKQTQEDPWQRVVDTYNVGDELEGRVTKVVTFGAFVEILDGVEG 324 Query: 477 YLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 + SE ++ VE+ ++ DEV+ K +D + R +SLS++ Sbjct: 325 LVHISELAQHHVENPREIIQPNDEVKVKILEIDSERRRLSLSIK 368 >UniRef50_Q67NT8 30S ribosomal protein S1 n=1 Tax=Symbiobacterium thermophilum RepID=Q67NT8_SYMTH Length = 441 Score = 283 bits (725), Expect = 9e-75, Method: Compositional matrix adjust. Identities = 148/334 (44%), Positives = 226/334 (67%), Gaps = 7/334 (2%) Query: 19 RPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN----AQGELEIQVGDEVDVALDA 74 +PG IVRG VV + D ++VD G KSE IP + + + + ++VGDEV V + + Sbjct: 54 KPGDIVRGQVVRVSDDSIMVDVGYKSEGIIPLNELSHRPLRSAHDAGLKVGDEVQVVVLS 113 Query: 75 VE-DGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPG 133 V+ G G +S+ +A AW +E+ +E E + + VKGG V+L G+RAFLP Sbjct: 114 VDTKGEGGLRISKRRADEQLAWAEVERKFEAGEVIEAEVTEAVKGGLVVDL-GLRAFLPA 172 Query: 134 SLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGM 193 S VD V D G+++ K+I+LD + V++SR+ V+E+E +A R++ +QEG Sbjct: 173 SQVDRGYVADLSKFVGQKIRVKIIELDPYKGRVILSRKQVLEAERTAARERFWSTVQEGD 232 Query: 194 EVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERT 253 ++G VK++TD+GAF+DLGGVDGLLHI++M++ R+KHPS++V+ G+ I VKVL+ DRE+ Sbjct: 233 VLEGTVKSITDFGAFIDLGGVDGLLHISEMSYGRIKHPSQVVSEGERIKVKVLRLDREKG 292 Query: 254 RVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTN 313 +VSLGLKQ+ DPW ++ ++YPEG + G V LT +G FVE+E GV+GL+H+S+M Sbjct: 293 KVSLGLKQVLPDPWDSVEEKYPEGAIVEGTVARLTTFGAFVELEPGVDGLIHISQMADRR 352 Query: 314 KNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLK 347 N +P +VV++GDVV+V V+++D + RRISL L+ Sbjct: 353 IN-NPGEVVSIGDVVKVKVINVDAQNRRISLSLR 385 Score = 138 bits (347), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 106/340 (31%), Positives = 183/340 (53%), Gaps = 27/340 (7%) Query: 195 VKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEI-VNVGDEITVKVLKFDRER 252 V+G V ++D VD+G +G++ + +++ + ++ + + VGDE+ V VL D Sbjct: 59 VRGQVVRVSDDSIMVDVGYKSEGIIPLNELSHRPLRSAHDAGLKVGDEVQVVVLSVD--- 115 Query: 253 TRVSLGLK--------QLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLV 304 T+ GL+ QL W + +++ G + VT G V++ G+ + Sbjct: 116 TKGEGGLRISKRRADEQLA---WAEVERKFEAGEVIEAEVTEAVKGGLVVDL--GLRAFL 170 Query: 305 HVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC----KANPWQQFAET 360 S++D + VG + V ++++D + R+ L KQ + ++F T Sbjct: 171 PASQVD---RGYVADLSKFVGQKIRVKIIELDPYKGRVILSRKQVLEAERTAARERFWST 227 Query: 361 HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL 420 +GD +EG +KSITDFG FI L GG+DGL+H+S++S+ + + +G+ I VL Sbjct: 228 VQEGDVLEGTVKSITDFGAFIDL-GGVDGLLHISEMSYGRIKHPS-QVVSEGERIKVKVL 285 Query: 421 QVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRA 480 ++D E+ ++SLG+KQ+ DP+++ +GAIV G V + GA VEL GV+G + Sbjct: 286 RLDREKGKVSLGLKQVLPDPWDSVEEKYPEGAIVEGTVARLTTFGAFVELEPGVDGLIHI 345 Query: 481 SEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 S+ + R+ + V+S+GD V+ K VD +NR ISLS+R Sbjct: 346 SQMADRRINNPGEVVSIGDVVKVKVINVDAQNRRISLSLR 385 >UniRef50_B1I3Y7 Hydroxymethylbutenyl pyrophosphate reductase n=3 Tax=Clostridiales RepID=B1I3Y7_DESAP Length = 677 Score = 283 bits (724), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 150/334 (44%), Positives = 220/334 (65%), Gaps = 7/334 (2%) Query: 19 RPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQ---FKNAQGELEIQVGDEVDVALDAV 75 R G IVRGV+V + +D VLVD G KSE +P + + + + +QVGDE+DV + Sbjct: 319 RSGDIVRGVIVQVGQDEVLVDVGAKSEGVVPLRELSCYDVSSPDEVVQVGDEIDVWVVKA 378 Query: 76 EDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSL 135 ED G +LS+ +A +AW TL+KA+ ETV GV+ VKGG V+L G+R+FLP S Sbjct: 379 EDNEGRIILSKGRADAVKAWDTLDKAFHGGETVRGVVREVVKGGLLVDL-GVRSFLPASQ 437 Query: 136 VDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEV 195 V+ V D G+E+ ++I+L++ R V++SR+ ++E E S +R + LE QEG V Sbjct: 438 VERGYVEDLSQYVGREISARIIELNKARKKVILSRKVLLEEEYSRKRKETLETTQEGDVV 497 Query: 196 KGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRV 255 KG+V+ LT +GAFVD+GG+DGLLHI++++W R+ HPSE++ VGDE+ V+VL+ DRE +V Sbjct: 498 KGVVRRLTQFGAFVDIGGLDGLLHISEISWHRINHPSEVLKVGDELEVQVLRIDRENEKV 557 Query: 256 SLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEM-DWTNK 314 SL LKQ+ +PW + + YP G+ ++ RV L +G FVE+E GVEGLVH+S + DW Sbjct: 558 SLSLKQVLPNPWEQVVENYPVGSVVSARVVRLVPFGAFVELEPGVEGLVHISHLADWHVA 617 Query: 315 NIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQ 348 P V+ G + V VL +D+E +RI L L++ Sbjct: 618 K--PEDVIAEGQQINVKVLSVDDENKRIRLSLRE 649 Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 101/296 (34%), Positives = 165/296 (55%), Gaps = 15/296 (5%) Query: 149 GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAF 208 G E++ V+K + +++S+ ++ D L + G V+G+V+ + G Sbjct: 368 GDEIDVWVVKAEDNEGRIILSKG---RADAVKAWDTLDKAFHGGETVRGVVREVVKGGLL 424 Query: 209 VDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWV 268 VDLG V L + + V+ S+ V G EI+ ++++ ++ R +V L K L E+ + Sbjct: 425 VDLG-VRSFLPASQVERGYVEDLSQYV--GREISARIIELNKARKKVILSRKVLLEEEYS 481 Query: 269 AIAKRYPEGTK----LTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNV 324 K E T+ + G V LT +G FV+I G++GL+H+SE+ W N HPS+V+ V Sbjct: 482 RKRKETLETTQEGDVVKGVVRRLTQFGAFVDIG-GLDGLLHISEISWHRIN-HPSEVLKV 539 Query: 325 GDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLD 384 GD +EV VL ID E ++SL LKQ NPW+Q E + G V ++ + FG F+ L+ Sbjct: 540 GDELEVQVLRIDRENEKVSLSLKQVLPNPWEQVVENYPVGSVVSARVVRLVPFGAFVELE 599 Query: 385 GGIDGLVHLSDIS-WNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAED 439 G++GLVH+S ++ W+VA E V +G +I VL VD E +RI L ++++ +D Sbjct: 600 PGVEGLVHISHLADWHVAKPEDV--IAEGQQINVKVLSVDDENKRIRLSLREVVKD 653 Score = 124 bits (311), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 96/341 (28%), Positives = 178/341 (52%), Gaps = 13/341 (3%) Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 + +L+ G V+G++ + VD+G +G++ + +++ V P E+V VGDEI V Sbjct: 315 VRSLRSGDIVRGVIVQVGQDEVLVDVGAKSEGVVPLRELSCYDVSSPDEVVQVGDEIDVW 374 Query: 245 VLKFDRERTRVSLGLKQL-GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGL 303 V+K + R+ L + W + K + G + G V + G V++ GV Sbjct: 375 VVKAEDNEGRIILSKGRADAVKAWDTLDKAFHGGETVRGVVREVVKGGLLVDL--GVRSF 432 Query: 304 VHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLG----LKQCKANPWQQFAE 359 + S+++ + VG + ++++++ R+++ L L++ + ++ E Sbjct: 433 LPASQVE---RGYVEDLSQYVGREISARIIELNKARKKVILSRKVLLEEEYSRKRKETLE 489 Query: 360 THNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVV 419 T +GD V+G ++ +T FG F+ + GG+DGL+H+S+ISW+ + K GDE+ V Sbjct: 490 TTQEGDVVKGVVRRLTQFGAFVDI-GGLDGLLHISEISWHRINHPS-EVLKVGDELEVQV 547 Query: 420 LQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLR 479 L++D E E++SL +KQ+ +P+ V G++V+ +V + GA VEL GVEG + Sbjct: 548 LRIDRENEKVSLSLKQVLPNPWEQVVENYPVGSVVSARVVRLVPFGAFVELEPGVEGLVH 607 Query: 480 ASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 S + V V++ G ++ K VD +N+ I LS+R Sbjct: 608 ISHLADWHVAKPEDVIAEGQQINVKVLSVDDENKRIRLSLR 648 >UniRef50_Q30ZT8 SSU ribosomal protein S1P n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30ZT8_DESDG Length = 482 Score = 278 bits (711), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 160/441 (36%), Positives = 246/441 (55%), Gaps = 10/441 (2%) Query: 2 TESFAQLFEESLKEIET--RPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE 59 ++SFA L ++ E + R G V+G VVA+D+ V + G K + I AE+ K+ +G Sbjct: 10 SDSFADLLDQYSPEAGSPLRVGEKVKGSVVAMDESSVFIATGSKVDGVIDAEELKDKEGN 69 Query: 60 LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGG 119 + VGDE+D+ + A+ G E LSR A + L +A+E+ V G + + KGG Sbjct: 70 VTCAVGDELDLYVVAITQG--EVRLSRSAGSAGSA-MALTEAFENGVPVEGKVTAQCKGG 126 Query: 120 FTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 F VE+ RAF P S +D R V + G+ +F + + + NVVVSRR ++E++ Sbjct: 127 FNVEVMQRRAFCPVSQIDSRFVENPEEYLGQTFQFMITRCENNGRNVVVSRRVLLEAQQE 186 Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVG 238 R + ++ L EG V + LT++GAF +L GV+GL+HI+++ W RV+ E V G Sbjct: 187 ESRKEYMKTLNEGDVVDVCITRLTNFGAFAELAPGVEGLIHISELGWARVQSADEAVTQG 246 Query: 239 DEITVKVLKFDR--ERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI 296 D + KVLK + + R++L KQ+ EDPW +A R GT + G+V T +G FVE+ Sbjct: 247 DTLRAKVLKIESTAKGLRIALSAKQVMEDPWNTVADRLAAGTVVEGKVVRCTPFGAFVEV 306 Query: 297 EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQ 356 G+EGLVH+SEM WT + + VV GD V V + DID +RRISL L++ + +PW Sbjct: 307 LPGIEGLVHISEMSWTRRILKAEDVVIPGDTVSVKIKDIDSAKRRISLSLREAEGDPWDG 366 Query: 357 FAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIA 416 AE G V G ++ FG+F+ + GI GL+ S IS A + + K GD + Sbjct: 367 AAEKFAPGTEVTGTVEKCAKFGMFVNIAPGITGLLPQSRIS--AAPKSGLAGCKPGDTVT 424 Query: 417 AVVLQVDAERERISLGVKQLA 437 V++++ +++L K A Sbjct: 425 LAVMEINPAERKVTLTTKDAA 445 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 110/386 (28%), Positives = 177/386 (45%), Gaps = 14/386 (3%) Query: 149 GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAF 208 G EL+ V+ + Q V +SR A S SA L E + G+ V+G V G Sbjct: 75 GDELDLYVVAITQ--GEVRLSRSA--GSAGSAM--ALTEAFENGVPVEGKVTAQCKGGFN 128 Query: 209 VDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVS--LGLKQLGEDP 266 V++ ++ + + V++P E + + + + + VS + L+ E+ Sbjct: 129 VEVMQRRAFCPVSQIDSRFVENPEEYLGQTFQFMITRCENNGRNVVVSRRVLLEAQQEES 188 Query: 267 WVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGD 326 K EG + +T LT++G F E+ GVEGL+H+SE+ W + V GD Sbjct: 189 RKEYMKTLNEGDVVDVCITRLTNFGAFAELAPGVEGLIHISELGWARVQ-SADEAVTQGD 247 Query: 327 VVEVMVLDIDEERR--RISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLD 384 + VL I+ + RI+L KQ +PW A+ G VEGK+ T FG F+ + Sbjct: 248 TLRAKVLKIESTAKGLRIALSAKQVMEDPWNTVADRLAAGTVVEGKVVRCTPFGAFVEVL 307 Query: 385 GGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNW 444 GI+GLVH+S++SW +A GD ++ + +D+ + RISL +++ DP++ Sbjct: 308 PGIEGLVHISEMSWTRRILKAEDVVIPGDTVSVKIKDIDSAKRRISLSLREAEGDPWDGA 367 Query: 445 VALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAK 504 G VTG V G V +A G+ G L S S + GD V Sbjct: 368 AEKFAPGTEVTGTVEKCAKFGMFVNIAPGITGLLPQSRISAAP-KSGLAGCKPGDTVTLA 426 Query: 505 FTGVDRKNRAISLSVRAKDEADEKDA 530 ++ R ++L+ KD A ++DA Sbjct: 427 VMEINPAERKVTLTT--KDAARQEDA 450 Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 105/356 (29%), Positives = 177/356 (49%), Gaps = 27/356 (7%) Query: 189 LQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLK 247 L+ G +VKG V + + F+ G VDG++ ++ + K + VGDE+ + V+ Sbjct: 28 LRVGEKVKGSVVAMDESSVFIATGSKVDGVIDAEEL---KDKEGNVTCAVGDELDLYVVA 84 Query: 248 FDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVS 307 + R+S G +A+ + + G + G+VT G VE+ + VS Sbjct: 85 ITQGEVRLSRSAGSAGSA--MALTEAFENGVPVEGKVTAQCKGGFNVEVMQ-RRAFCPVS 141 Query: 308 EMDWTNKNIHPSKVVNVGDVVEVMVLDIDEE------RRRISLGLKQCKANPWQQFAETH 361 ++D + +P + + G + M+ + RR+ L +Q ++ +++ +T Sbjct: 142 QID-SRFVENPEEYL--GQTFQFMITRCENNGRNVVVSRRVLLEAQQEESR--KEYMKTL 196 Query: 362 NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWN--VAGEEAVREYKKGDEIAAVV 419 N+GD V+ I +T+FG F L G++GL+H+S++ W + +EAV + GD + A V Sbjct: 197 NEGDVVDVCITRLTNFGAFAELAPGVEGLIHISELGWARVQSADEAVTQ---GDTLRAKV 253 Query: 420 LQVDAERE--RISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGY 477 L++++ + RI+L KQ+ EDP+N G +V GKV GA VE+ G+EG Sbjct: 254 LKIESTAKGLRIALSAKQVMEDPWNTVADRLAAGTVVEGKVVRCTPFGAFVEVLPGIEGL 313 Query: 478 LRASEAS-RDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIA 532 + SE S R+ A V+ GD V K +D R ISLS+R + E D D A Sbjct: 314 VHISEMSWTRRILKAEDVVIPGDTVSVKIKDIDSAKRRISLSLR-EAEGDPWDGAA 368 >UniRef50_A4J3N5 Hydroxymethylbutenyl pyrophosphate reductase n=3 Tax=Clostridia RepID=A4J3N5_DESRM Length = 672 Score = 273 bits (699), Expect = 9e-72, Method: Compositional matrix adjust. Identities = 147/344 (42%), Positives = 225/344 (65%), Gaps = 7/344 (2%) Query: 9 FEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQ--FKNAQGELEI-QVG 65 E+++ + G +V+G+VV + D VLVD KSE IP ++ F EI +VG Sbjct: 286 MSEAMEVKSPQAGELVKGIVVQVGMDEVLVDIRAKSEGVIPRKEMAFYGVDNLQEIVKVG 345 Query: 66 DEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN 125 DE++ + ED G+ +LS+E+A +AW LE+A E + GV+ VKGG V++ Sbjct: 346 DEIECVVIKAEDNEGKIILSKERADAEKAWDGLEEAMEQGTIIKGVVREVVKGGMLVDV- 404 Query: 126 GIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQL 185 G+RAFLP SLV+ V D +E E +VI+++++R VVVSR+AV+E +N+ +R++L Sbjct: 405 GVRAFLPASLVERGYVEDLSKYLNQEFEVRVIEMNKQRKKVVVSRKAVLEEQNARKREEL 464 Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKV 245 L +LQEG VKGIV+ +T++GAFVDLGG+DGLLHI++M+W R+ HP E+V VGDE+ V V Sbjct: 465 LASLQEGQIVKGIVRRITNFGAFVDLGGLDGLLHISEMSWHRINHPQEVVKVGDELEVMV 524 Query: 246 LKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVH 305 LK D + ++SLGLKQ+ +PW + ++YP G +V L +G FV++E GVEGLVH Sbjct: 525 LKVDTQNEKISLGLKQVLPNPWDNVEEKYPVGNIFNAKVVRLAPFGAFVQLEPGVEGLVH 584 Query: 306 VSEMDWTNKNIH-PSKVVNVGDVVEVMVLDIDEERRRISLGLKQ 348 +S + ++++ P VV G+ V+V VL +D +R+ L +++ Sbjct: 585 ISHL--ADRHVEKPEDVVKEGEEVQVKVLSMDPSEKRVRLSIRE 626 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 94/293 (32%), Positives = 163/293 (55%), Gaps = 15/293 (5%) Query: 149 GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAF 208 G E+E VIK + +++S+ ++ D L E +++G +KG+V+ + G Sbjct: 345 GDEIECVVIKAEDNEGKIILSKE---RADAEKAWDGLEEAMEQGTIIKGVVREVVKGGML 401 Query: 209 VDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWV 268 VD+G V L + + V+ S+ +N E V+V++ +++R +V + K + E+ Sbjct: 402 VDVG-VRAFLPASLVERGYVEDLSKYLN--QEFEVRVIEMNKQRKKVVVSRKAVLEEQNA 458 Query: 269 ----AIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNV 324 + EG + G V +T++G FV++ G++GL+H+SEM W N HP +VV V Sbjct: 459 RKREELLASLQEGQIVKGIVRRITNFGAFVDLG-GLDGLLHISEMSWHRIN-HPQEVVKV 516 Query: 325 GDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLD 384 GD +EVMVL +D + +ISLGLKQ NPW E + G+ K+ + FG F+ L+ Sbjct: 517 GDELEVMVLKVDTQNEKISLGLKQVLPNPWDNVEEKYPVGNIFNAKVVRLAPFGAFVQLE 576 Query: 385 GGIDGLVHLSDIS-WNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQL 436 G++GLVH+S ++ +V E V K+G+E+ VL +D +R+ L ++++ Sbjct: 577 PGVEGLVHISHLADRHVEKPEDV--VKEGEEVQVKVLSMDPSEKRVRLSIREV 627 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 111/365 (30%), Positives = 186/365 (50%), Gaps = 21/365 (5%) Query: 190 QEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKF 248 Q G VKGIV + VD+ +G++ +MA+ V + EIV VGDEI V+K Sbjct: 296 QAGELVKGIVVQVGMDEVLVDIRAKSEGVIPRKEMAFYGVDNLQEIVKVGDEIECVVIKA 355 Query: 249 DRERTRVSLGLKQL-GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVS 307 + ++ L ++ E W + + +GT + G V + G V++ GV + S Sbjct: 356 EDNEGKIILSKERADAEKAWDGLEEAMEQGTIIKGVVREVVKGGMLVDV--GVRAFLPAS 413 Query: 308 --EMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLG----LKQCKANPWQQFAETH 361 E + SK +N EV V++++++R+++ + L++ A ++ + Sbjct: 414 LVERGYVEDL---SKYLN--QEFEVRVIEMNKQRKKVVVSRKAVLEEQNARKREELLASL 468 Query: 362 NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAG--EEAVREYKKGDEIAAVV 419 +G V+G ++ IT+FG F+ L GG+DGL+H+S++SW+ +E V K GDE+ +V Sbjct: 469 QEGQIVKGIVRRITNFGAFVDL-GGLDGLLHISEMSWHRINHPQEVV---KVGDELEVMV 524 Query: 420 LQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLR 479 L+VD + E+ISLG+KQ+ +P++N G I KV + GA V+L GVEG + Sbjct: 525 LKVDTQNEKISLGLKQVLPNPWDNVEEKYPVGNIFNAKVVRLAPFGAFVQLEPGVEGLVH 584 Query: 480 ASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQED 539 S + VE V+ G+EV+ K +D + + LS+R + A KQE+ Sbjct: 585 ISHLADRHVEKPEDVVKEGEEVQVKVLSMDPSEKRVRLSIREVNGERRSAREARPRKQEE 644 Query: 540 ANFSN 544 N Sbjct: 645 VQEQN 649 >UniRef50_C0GDV0 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GDV0_9FIRM Length = 678 Score = 273 bits (697), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 140/342 (40%), Positives = 222/342 (64%), Gaps = 7/342 (2%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQV---GDEVDVALD 73 E G +V G VV + D VLVD G KSE +P ++ ++ V G EV+VA+ Sbjct: 302 EFSAGDVVTGTVVQVSDDEVLVDIGYKSEGVLPRQEVILEGDQMLADVMENGQEVEVAVK 361 Query: 74 AVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNG-IRAFLP 132 V+D G +LSR+ +R + W LEKA+E+ ++G + V G VEL G AF+P Sbjct: 362 KVDDQEGRIILSRKAIERKQKWAELEKAFEEGTILSGKVKEAVPAGLVVELGGGYDAFMP 421 Query: 133 GSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEG 192 GSLVDVR + D +G+E+ FK+I++ ++ +++SR+ V+E E + ++D++L L+ G Sbjct: 422 GSLVDVRYIPDFNEFQGQEISFKIIEMRPEKEKLILSRKQVLEEEAAVQKDKVLAELEPG 481 Query: 193 MEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRER 252 +KG VK LT++GAFVD+GG+DGL+HI++++W R+ +P E+++VGDEI VKV++ ER Sbjct: 482 QIIKGTVKRLTNFGAFVDVGGIDGLVHISEISWHRIDNPGEVLSVGDEIEVKVIEVIPER 541 Query: 253 TRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWT 312 R+ L L+Q DPW + +++ G + G+VT + D+G FVE+ GVEGLVH+S++ Sbjct: 542 ERIGLSLRQAQPDPWTEVGQKFSAGDVVEGKVTRIVDFGAFVELIPGVEGLVHISQL--A 599 Query: 313 NKNI-HPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP 353 N ++ PS+VV GDVV+V +LDI+ + +R+SL ++ P Sbjct: 600 NYHVKQPSEVVQQGDVVKVKILDINTDGKRVSLSMRDAAPRP 641 Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 95/298 (31%), Positives = 170/298 (57%), Gaps = 15/298 (5%) Query: 149 GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAF 208 G+E+E V K+D + +++SR+A+ + AE ++ E EG + G VK G Sbjct: 353 GQEVEVAVKKVDDQEGRIILSRKAIERKQKWAELEKAFE---EGTILSGKVKEAVPAGLV 409 Query: 209 VDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPW 267 V+LGG D + + + + + +E G EI+ K+++ E+ ++ L KQ+ E+ Sbjct: 410 VELGGGYDAFMPGSLVDVRYIPDFNEFQ--GQEISFKIIEMRPEKEKLILSRKQVLEEEA 467 Query: 268 VA-----IAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVV 322 +A+ P G + G V LT++G FV++ G++GLVH+SE+ W + +P +V+ Sbjct: 468 AVQKDKVLAELEP-GQIIKGTVKRLTNFGAFVDVG-GIDGLVHISEISWHRID-NPGEVL 524 Query: 323 NVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIG 382 +VGD +EV V+++ ER RI L L+Q + +PW + + + GD VEGK+ I DFG F+ Sbjct: 525 SVGDEIEVKVIEVIPERERIGLSLRQAQPDPWTEVGQKFSAGDVVEGKVTRIVDFGAFVE 584 Query: 383 LDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDP 440 L G++GLVH+S ++ N ++ ++GD + +L ++ + +R+SL ++ A P Sbjct: 585 LIPGVEGLVHISQLA-NYHVKQPSEVVQQGDVVKVKILDINTDGKRVSLSMRDAAPRP 641 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 108/378 (28%), Positives = 182/378 (48%), Gaps = 17/378 (4%) Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEI 241 DQ ++ G V G V ++D VD+G +G+L ++ + + ++++ G E+ Sbjct: 297 DQEIKEFSAGDVVTGTVVQVSDDEVLVDIGYKSEGVLPRQEVILEGDQMLADVMENGQEV 356 Query: 242 TVKVLKFDRERTRVSLGLKQL-GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV 300 V V K D + R+ L K + + W + K + EGT L+G+V G VE+ G Sbjct: 357 EVAVKKVDDQEGRIILSRKAIERKQKWAELEKAFEEGTILSGKVKEAVPAGLVVELGGGY 416 Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC----KANPWQQ 356 + + S +D P G + ++++ E+ ++ L KQ A + Sbjct: 417 DAFMPGSLVDV---RYIPDFNEFQGQEISFKIIEMRPEKEKLILSRKQVLEEEAAVQKDK 473 Query: 357 FAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIA 416 G ++G +K +T+FG F+ + GGIDGLVH+S+ISW+ GDEI Sbjct: 474 VLAELEPGQIIKGTVKRLTNFGAFVDV-GGIDGLVHISEISWHRIDNPG-EVLSVGDEIE 531 Query: 417 AVVLQVDAERERISLGVKQLAEDPFNNWVALNKK---GAIVTGKVTAVDAKGATVELADG 473 V++V ERERI L ++Q DP W + +K G +V GKVT + GA VEL G Sbjct: 532 VKVIEVIPERERIGLSLRQAQPDP---WTEVGQKFSAGDVVEGKVTRIVDFGAFVELIPG 588 Query: 474 VEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIAT 533 VEG + S+ + V+ + V+ GD V+ K ++ + +SLS+R +K+ Sbjct: 589 VEGLVHISQLANYHVKQPSEVVQQGDVVKVKILDINTDGKRVSLSMRDAAPRPKKEQTRQ 648 Query: 534 VNKQEDANFSNNAMAEAF 551 V +Q + + + + F Sbjct: 649 VQQQPEDTGTGVTLGDVF 666 >UniRef50_D1B5G8 RNA binding S1 domain protein n=3 Tax=Synergistaceae RepID=D1B5G8_THEAS Length = 504 Score = 272 bits (696), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 162/435 (37%), Positives = 258/435 (59%), Gaps = 12/435 (2%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQGELEIQVGDE 67 E + + GS+V G VV +D LVD G K E +P ++ + + E QVGD Sbjct: 25 EQIDSVNIHRGSVVEGTVVDAREDGWLVDVGYKCEGFLPRREWSHRAIVEKVGEPQVGDR 84 Query: 68 VDVALDAVEDGFGETL-LSREKAKRHEAWITLEK--AYEDAETVTGVINGKVKGGFTVEL 124 + V + V G L LSR + + E W LE+ A D V G+ KVKGG V+ Sbjct: 85 IRVQVTNVGQGEEAQLNLSRWRCEFDERWNALEEKLAQSDVIEVEGI--RKVKGGLIVDC 142 Query: 125 NGIRAFLPGS-LVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERD 183 G+ F+P S L + + +L GK K+++ D+++ +V+SRR++++ E ++ R+ Sbjct: 143 CGLEGFIPISHLAEEGRGINPANLVGKTFPVKLVEKDRRKRRLVLSRRSILDEEMASLRE 202 Query: 184 QLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITV 243 + N+ EG ++G V ++T +G FV+LG ++GL+HIT+++W+R ++V GD++ V Sbjct: 203 EFYANVHEGDILEGEVSSITSFGVFVNLGAMEGLVHITELSWQRGAKAKDLVQKGDKVKV 262 Query: 244 KVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGL 303 KV+ DRE RVSL LKQ EDPWV + R+ G + G VTNL D+G FVEIE GVEGL Sbjct: 263 KVIGIDRENNRVSLSLKQAQEDPWVGVTSRWTVGQRTKGVVTNLADFGAFVEIEPGVEGL 322 Query: 304 VHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNK 363 +H+ ++ W+ HP +V+ G VEV++L++D +RRRI LGLKQ +PW +E ++K Sbjct: 323 IHIGDLSWSRVK-HPKEVLKKGQEVEVVILEVDGDRRRIGLGLKQLN-DPWANVSEKYSK 380 Query: 364 GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVD 423 V K+ + DFG F+ ++ G++GL+H+S +S E+ ++G E+ A +L+V+ Sbjct: 381 DQVVTVKVVRLADFGAFVEIEDGVEGLIHISQLSRQRV-EKPSDVLREGQEVQAKILEVN 439 Query: 424 AERERISLGVKQLAE 438 +RI L ++ L E Sbjct: 440 PSEKRIRLSLRALEE 454 Score = 187 bits (476), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 122/338 (36%), Positives = 193/338 (57%), Gaps = 13/338 (3%) Query: 193 MEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWK-RVKHPSEIVNVGDEITVKVLKFDRE 251 +EV+GI K G VD G++G + I+ +A + R +P+ +V G VK+++ DR Sbjct: 126 IEVEGIRK--VKGGLIVDCCGLEGFIPISHLAEEGRGINPANLV--GKTFPVKLVEKDRR 181 Query: 252 RTRVSLGLKQLGEDPWVAIAKRY----PEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVS 307 + R+ L + + ++ ++ + + EG L G V+++T +G FV + +EGLVH++ Sbjct: 182 KRRLVLSRRSILDEEMASLREEFYANVHEGDILEGEVSSITSFGVFVNLG-AMEGLVHIT 240 Query: 308 EMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRV 367 E+ W + +V GD V+V V+ ID E R+SL LKQ + +PW G R Sbjct: 241 ELSW-QRGAKAKDLVQKGDKVKVKVIGIDRENNRVSLSLKQAQEDPWVGVTSRWTVGQRT 299 Query: 368 EGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERE 427 +G + ++ DFG F+ ++ G++GL+H+ D+SW+ + KKG E+ V+L+VD +R Sbjct: 300 KGVVTNLADFGAFVEIEPGVEGLIHIGDLSWSRV-KHPKEVLKKGQEVEVVILEVDGDRR 358 Query: 428 RISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDR 487 RI LG+KQL DP+ N K +VT KV + GA VE+ DGVEG + S+ SR R Sbjct: 359 RIGLGLKQL-NDPWANVSEKYSKDQVVTVKVVRLADFGAFVEIEDGVEGLIHISQLSRQR 417 Query: 488 VEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEA 525 VE + VL G EV+AK V+ + I LS+RA +E Sbjct: 418 VEKPSDVLREGQEVQAKILEVNPSEKRIRLSLRALEEP 455 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 109/372 (29%), Positives = 181/372 (48%), Gaps = 25/372 (6%) Query: 188 NLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVL 246 N+ G V+G V + + G VD+G +G L + + + + VGD I V+V Sbjct: 31 NIHRGSVVEGTVVDAREDGWLVDVGYKCEGFLPRREWSHRAIVEKVGEPQVGDRIRVQVT 90 Query: 247 KFDR-ERTRVSLGLKQLGEDP-WVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLV 304 + E +++L + D W A+ ++ + + G V+ G+EG + Sbjct: 91 NVGQGEEAQLNLSRWRCEFDERWNALEEKLAQSDVIEVEGIRKVKGGLIVDCC-GLEGFI 149 Query: 305 HVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLG----LKQCKANPWQQFAET 360 +S + + I+P+ +V G V +++ D +RR+ L L + A+ ++F Sbjct: 150 PISHLAEEGRGINPANLV--GKTFPVKLVEKDRRKRRLVLSRRSILDEEMASLREEFYAN 207 Query: 361 HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL 420 ++GD +EG++ SIT FG+F+ L G ++GLVH++++SW G +A +KGD++ V+ Sbjct: 208 VHEGDILEGEVSSITSFGVFVNL-GAMEGLVHITELSWQ-RGAKAKDLVQKGDKVKVKVI 265 Query: 421 QVDAERERISLGVKQLAEDPFNNWVALNKK---GAIVTGKVTAVDAKGATVELADGVEGY 477 +D E R+SL +KQ EDP WV + + G G VT + GA VE+ GVEG Sbjct: 266 GIDRENNRVSLSLKQAQEDP---WVGVTSRWTVGQRTKGVVTNLADFGAFVEIEPGVEGL 322 Query: 478 LRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKD-------EADEKDA 530 + + S RV+ VL G EVE VD R I L ++ + E KD Sbjct: 323 IHIGDLSWSRVKHPKEVLKKGQEVEVVILEVDGDRRRIGLGLKQLNDPWANVSEKYSKDQ 382 Query: 531 IATVNKQEDANF 542 + TV A+F Sbjct: 383 VVTVKVVRLADF 394 >UniRef50_C7RHT6 Hydroxymethylbutenyl pyrophosphate reductase n=8 Tax=Clostridiales Family XI. Incertae Sedis RepID=C7RHT6_ANAPD Length = 686 Score = 267 bits (682), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 146/354 (41%), Positives = 220/354 (62%), Gaps = 10/354 (2%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE--- 59 E F E+SLK+I P IV+G V+ + D V VD +++ I ++ + + Sbjct: 280 EEFMNSLEDSLKKI--YPKEIVKGTVIDVKDDEVFVDIQFRADGIIKLDEMTEEEAKDPK 337 Query: 60 LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGG 119 VGDE+DV + ++DG G LS + + + W L + E+ E V GV++G KGG Sbjct: 338 NSFNVGDEIDVFVIKLDDGEGNVSLSTRRVEGMKVWKDLAEKAENDELVHGVVSGFNKGG 397 Query: 120 FTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 TV + GI F+P S + V++ G+E + K+I +D+++N +V+SR+ V+E E Sbjct: 398 LTVNVEGINGFVPASQIATYFVKNFKKFVGEEWDLKIISIDERKNRLVLSRKEVVEDE-- 455 Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGD 239 D L E L+EG V G V LTD+GAFV++ G+DGLLH++D+AW RV+HPS+++NVGD Sbjct: 456 --LDGLWEELEEGQVVTGKVARLTDFGAFVEVNGLDGLLHVSDIAWSRVEHPSDVLNVGD 513 Query: 240 EITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEG 299 EI VK+LK ++E+ R+SLG KQL E P+ A ++ G +TG+V NL D+G FVE+ +G Sbjct: 514 EIEVKILKLNQEKNRISLGRKQLLEKPFEAFVNQHEVGDVVTGKVVNLLDFGAFVEVADG 573 Query: 300 VEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP 353 VEGLVHVSE+ W + PS +NVGD +EV ++ ID + ++ L +K K P Sbjct: 574 VEGLVHVSEISWEHVE-KPSDELNVGDEIEVKIISIDTDEEKVGLSIKALKEAP 626 Score = 172 bits (435), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 124/366 (33%), Positives = 198/366 (54%), Gaps = 17/366 (4%) Query: 173 VIESENSAERDQLLENLQEGME-------VKGIVKNLTDYGAFVDLG-GVDGLLHITDMA 224 V+ S + +++ + +L++ ++ VKG V ++ D FVD+ DG++ + +M Sbjct: 270 VVSSMDEFTKEEFMNSLEDSLKKIYPKEIVKGTVIDVKDDEVFVDIQFRADGIIKLDEMT 329 Query: 225 WKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQL-GEDPWVAIAKRYPEGTKLTGR 283 + K P NVGDEI V V+K D VSL +++ G W +A++ + G Sbjct: 330 EEEAKDPKNSFNVGDEIDVFVIKLDDGEGNVSLSTRRVEGMKVWKDLAEKAENDELVHGV 389 Query: 284 VTNLTDYGCFVEIEEGVEGLVHVSEM-DWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRI 342 V+ G V +E G+ G V S++ + KN VG+ ++ ++ IDE + R+ Sbjct: 390 VSGFNKGGLTVNVE-GINGFVPASQIATYFVKNFKKF----VGEEWDLKIISIDERKNRL 444 Query: 343 SLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAG 402 L K+ + E +G V GK+ +TDFG F+ ++G +DGL+H+SDI+W+ Sbjct: 445 VLSRKEVVEDELDGLWEELEEGQVVTGKVARLTDFGAFVEVNG-LDGLLHVSDIAWSRV- 502 Query: 403 EEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVD 462 E GDEI +L+++ E+ RISLG KQL E PF +V ++ G +VTGKV + Sbjct: 503 EHPSDVLNVGDEIEVKILKLNQEKNRISLGRKQLLEKPFEAFVNQHEVGDVVTGKVVNLL 562 Query: 463 AKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAK 522 GA VE+ADGVEG + SE S + VE + L+VGDE+E K +D + LS++A Sbjct: 563 DFGAFVEVADGVEGLVHVSEISWEHVEKPSDELNVGDEIEVKIISIDTDEEKVGLSIKAL 622 Query: 523 DEADEK 528 EA E+ Sbjct: 623 KEAPER 628 >UniRef50_A1HTW2 Hydroxymethylbutenyl pyrophosphate reductase n=4 Tax=Veillonellaceae RepID=A1HTW2_9FIRM Length = 655 Score = 266 bits (681), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 153/363 (42%), Positives = 217/363 (59%), Gaps = 12/363 (3%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEI 62 + F QL ++ +K +E PG I++G VV + KD V VD G K E IP + E Sbjct: 273 QEFDQLLDQDMKPLE--PGVILKGRVVGVRKDEVFVDIGHKGEGVIPLTELAYPVPENAS 330 Query: 63 QV---GDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGG 119 V GDE+DV + A E G LS+ KA AW L+ A + ETVTG + VKGG Sbjct: 331 DVVSEGDEIDVYVLAPEGDDGPVKLSKVKADNIVAWEKLQAAAQANETVTGKVTAVVKGG 390 Query: 120 FTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 V L G+R F+P S V V+ V D G+ LE I++DQ + +V+SRR V+E E Sbjct: 391 LAVSLYGVRGFVPASQVAVQHVADLTPYVGQTLELLPIEIDQAKQKIVLSRRKVLEQEQQ 450 Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGD 239 ++L L EG V G V + D+G FVDLGGVDGL+HI+D++W RVK+P+E+VN+GD Sbjct: 451 RRAEELFSRLAEGQIVTGTVSRIADFGVFVDLGGVDGLIHISDLSWHRVKNPTEVVNIGD 510 Query: 240 EITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEG 299 E+ V V K D + R+SL LK++ DPW + + EG + G+VT L +G FVE++ G Sbjct: 511 EVQVFVQKVDPKAKRISLSLKRVQRDPWYDVVEGLREGMTVAGKVTKLAKFGAFVEVKPG 570 Query: 300 VEGLVHVSEMDWTNKNIHPSK-VVNVGDVVEVMVLDIDEERRRISLGLKQCKANP----W 354 VEGLVH+SE+ ++ + ++ VV VG V V +L ID+E +RISL + Q + + + Sbjct: 571 VEGLVHLSEL--ADRRVASAQEVVEVGQTVTVKILGIDKENKRISLSIAQAQQDAERADY 628 Query: 355 QQF 357 Q+F Sbjct: 629 QRF 631 Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 116/355 (32%), Positives = 195/355 (54%), Gaps = 15/355 (4%) Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSEIVNVGDEI 241 DQ ++ L+ G+ +KG V + FVD+G +G++ +T++A+ ++ S++V+ GDEI Sbjct: 280 DQDMKPLEPGVILKGRVVGVRKDEVFVDIGHKGEGVIPLTELAYPVPENASDVVSEGDEI 339 Query: 242 TVKVLKFDRERTRVSLG-LKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV 300 V VL + + V L +K W + +TG+VT + G V + GV Sbjct: 340 DVYVLAPEGDDGPVKLSKVKADNIVAWEKLQAAAQANETVTGKVTAVVKGGLAVSLY-GV 398 Query: 301 EGLVHVSEMDWTN-KNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAE 359 G V S++ + ++ P VG +E++ ++ID+ +++I L ++ Q+ AE Sbjct: 399 RGFVPASQVAVQHVADLTP----YVGQTLELLPIEIDQAKQKIVLSRRKVLEQEQQRRAE 454 Query: 360 ----THNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEI 415 +G V G + I DFG+F+ L GG+DGL+H+SD+SW+ + GDE+ Sbjct: 455 ELFSRLAEGQIVTGTVSRIADFGVFVDL-GGVDGLIHISDLSWHRV-KNPTEVVNIGDEV 512 Query: 416 AAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVE 475 V +VD + +RISL +K++ DP+ + V ++G V GKVT + GA VE+ GVE Sbjct: 513 QVFVQKVDPKAKRISLSLKRVQRDPWYDVVEGLREGMTVAGKVTKLAKFGAFVEVKPGVE 572 Query: 476 GYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSV-RAKDEADEKD 529 G + SE + RV A V+ VG V K G+D++N+ ISLS+ +A+ +A+ D Sbjct: 573 GLVHLSELADRRVASAQEVVEVGQTVTVKILGIDKENKRISLSIAQAQQDAERAD 627 >UniRef50_C3XIZ7 30s ribosomal protein s1 n=6 Tax=Campylobacterales RepID=C3XIZ7_9HELI Length = 562 Score = 265 bits (677), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 175/564 (31%), Positives = 308/564 (54%), Gaps = 37/564 (6%) Query: 3 ESFAQLFEESLKEIETRPGSIVR-GVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE 61 E FA + S E +++R G +V ID + V++D K E + ++ K++ G L Sbjct: 17 EDFATMLSRS----EQSEDNVLREGKIVKIDDESVMIDVQDKKEGRMSIDEIKDSNGNLL 72 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKA----YEDAETVTGVINGKVK 117 + GD + V + G +S +KA ++E + KA Y+D + V GVI GK K Sbjct: 73 FKQGDSILVHVSKK----GGLRVSYKKAIKYEKVVNEIKALGTDYKD-KVVEGVIRGKNK 127 Query: 118 GGFTVE-LNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIES 176 GG+ VE NG+ F+P + +D + GK ++ ++ + N++V+SR+ +++ Sbjct: 128 GGYIVESANGVEYFMPRHYSALSRDKDDSKVVGKPIKACIVDIRPNGNSIVISRKRYLDT 187 Query: 177 ENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVN 236 +A+++ + L G+ +G+VKN+T +G FV++G VDGL+H T+++ + +P + Sbjct: 188 HTAAQKENAKKILDSGLAYEGVVKNVTKFGLFVEIGSVDGLVHFTEISHRGPVNPEKHYK 247 Query: 237 VGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI 296 VGD++ VK L+++ E+ R+SL ++ L +DPW I G + V+N+ DYG FV++ Sbjct: 248 VGDKVQVKPLEYNEEKNRLSLSIRALFDDPWKEIKDEIKVGYVIRVTVSNIEDYGAFVDL 307 Query: 297 EEGVEGLVHVSEMDWTNKNI-HPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQ 355 VEG +H+SEM W +KNI PS + VG+ + V V++ID + RR+ + LK+ + P+ Sbjct: 308 GNDVEGFLHISEMSW-DKNIKQPSDCLKVGEEINVEVIEIDPDNRRLRVSLKKLQDKPFV 366 Query: 356 QFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEI 415 +F + H GD ++GK+ +IT+FG F+ L G +DGL+H D W+ ++ E+K GD I Sbjct: 367 RFTKEHKVGDVIKGKVATITNFGAFVNL-GAVDGLLHNEDAFWD-KSKKCADEFKVGDSI 424 Query: 416 AAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAI---VTGKVTAVDAKGATVELAD 472 + ++D E+ISL + L E P + KK AI ++G+V + G +++ + Sbjct: 425 EVKIDKIDTANEKISLNRRYLVESPSEQFA---KKYAIDDEISGQVIDIKDFGVFIKVEN 481 Query: 473 -GVEGYLRASE---ASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEK 528 ++ +R + +RD ++ VGD ++ VDRK + LSVR + E+ Sbjct: 482 ENIDALIRNEDLGNIARDSIK-------VGDTIKGALVQVDRKANRVRLSVRRLQKKKER 534 Query: 529 DAIATVNKQEDANFSNNAMAEAFK 552 + N E + + + FK Sbjct: 535 QELNDYNSDEKVTLG-DTLGDKFK 557 >UniRef50_Q2RIU7 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RIU7_MOOTA Length = 736 Score = 263 bits (673), Expect = 9e-69, Method: Compositional matrix adjust. Identities = 149/358 (41%), Positives = 225/358 (62%), Gaps = 14/358 (3%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQF--KNAQGELEI-QVGDEVDVALD 73 E R G++V G VV I + V+VD G KSE IP + +N E+ VGD ++V + Sbjct: 361 ELRRGNVVAGTVVQITDNEVMVDVGGKSEGVIPLNELSHRNVTDPHEVVAVGDTINVMVL 420 Query: 74 AVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPG 133 E+ G +LS+ +A R AW LE+ E + G + VKGG V++ G+R FLP Sbjct: 421 RPENEEGHPVLSKRRADRRVAWEKLEEHLASGEEIQGEVIEVVKGGLLVDV-GVRGFLPA 479 Query: 134 SLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGM 193 SLV+ V D G+ L +VI+LD+ +N VV+SR+A++E E +R +L+ G Sbjct: 480 SLVERGYVEDLNAYLGQTLRLRVIELDRSKNKVVLSRKAILEEEYEKQRQATWNSLEVGQ 539 Query: 194 EVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERT 253 KGIV+ LT++GAFVDLGGVDGLLH+++++W RV+HP + ++ G EI VK+L DRE Sbjct: 540 VRKGIVRRLTNFGAFVDLGGVDGLLHVSEISWGRVEHPRDALSEGQEIEVKILGIDREEG 599 Query: 254 RVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTN 313 +VSLG KQL +PW A+RYP GT + G++ L +G FVE+E G+EGLVH+S++ + Sbjct: 600 KVSLGRKQLLPNPWDTAAERYPVGTIVEGKILRLAPFGAFVEVEPGIEGLVHISQL--AD 657 Query: 314 KNI-HPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC-------KANPWQQFAETHNK 363 +++ P VV++GD++ V VL +D++ +R+SL L+Q +A P ++ AE N+ Sbjct: 658 RHVDKPEDVVSIGDIIPVKVLGVDQQAQRMSLSLRQAIREKNRKQAKPAEKPAENQNE 715 Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 108/373 (28%), Positives = 185/373 (49%), Gaps = 14/373 (3%) Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 + L+ G V G V +TD VD+GG +G++ + +++ + V P E+V VGD I V Sbjct: 359 MPELRRGNVVAGTVVQITDNEVMVDVGGKSEGVIPLNELSHRNVTDPHEVVAVGDTINVM 418 Query: 245 VLKFDRERTRVSLGLKQLGED-PWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGL 303 VL+ + E L ++ W + + G ++ G V + G V++ GV G Sbjct: 419 VLRPENEEGHPVLSKRRADRRVAWEKLEEHLASGEEIQGEVIEVVKGGLLVDV--GVRGF 476 Query: 304 VHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQ-QFAETHN 362 + S ++ + +G + + V+++D + ++ L K ++ Q T N Sbjct: 477 LPASLVE---RGYVEDLNAYLGQTLRLRVIELDRSKNKVVLSRKAILEEEYEKQRQATWN 533 Query: 363 K---GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVV 419 G +G ++ +T+FG F+ L GG+DGL+H+S+ISW E +G EI + Sbjct: 534 SLEVGQVRKGIVRRLTNFGAFVDL-GGVDGLLHVSEISWGRV-EHPRDALSEGQEIEVKI 591 Query: 420 LQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLR 479 L +D E ++SLG KQL +P++ G IV GK+ + GA VE+ G+EG + Sbjct: 592 LGIDREEGKVSLGRKQLLPNPWDTAAERYPVGTIVEGKILRLAPFGAFVEVEPGIEGLVH 651 Query: 480 ASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR-AKDEADEKDAIATVNKQE 538 S+ + V+ V+S+GD + K GVD++ + +SLS+R A E + K A E Sbjct: 652 ISQLADRHVDKPEDVVSIGDIIPVKVLGVDQQAQRMSLSLRQAIREKNRKQAKPAEKPAE 711 Query: 539 DANFSNNAMAEAF 551 + N S + + F Sbjct: 712 NQNESGVKLGDLF 724 Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 95/292 (32%), Positives = 156/292 (53%), Gaps = 15/292 (5%) Query: 149 GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAF 208 G + V++ + + + V+S+R ++ ++L E+L G E++G V + G Sbjct: 412 GDTINVMVLRPENEEGHPVLSKR---RADRRVAWEKLEEHLASGEEIQGEVIEVVKGGLL 468 Query: 209 VDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPW- 267 VD+G V G L + + V+ + +G + ++V++ DR + +V L K + E+ + Sbjct: 469 VDVG-VRGFLPASLVERGYVEDLN--AYLGQTLRLRVIELDRSKNKVVLSRKAILEEEYE 525 Query: 268 ---VAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNV 324 A G G V LT++G FV++ GV+GL+HVSE+ W + HP ++ Sbjct: 526 KQRQATWNSLEVGQVRKGIVRRLTNFGAFVDLG-GVDGLLHVSEISW-GRVEHPRDALSE 583 Query: 325 GDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLD 384 G +EV +L ID E ++SLG KQ NPW AE + G VEGKI + FG F+ ++ Sbjct: 584 GQEIEVKILGIDREEGKVSLGRKQLLPNPWDTAAERYPVGTIVEGKILRLAPFGAFVEVE 643 Query: 385 GGIDGLVHLSDIS-WNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQ 435 GI+GLVH+S ++ +V E V GD I VL VD + +R+SL ++Q Sbjct: 644 PGIEGLVHISQLADRHVDKPEDV--VSIGDIIPVKVLGVDQQAQRMSLSLRQ 693 >UniRef50_Q7VJV6 Ribosomal protein S1 n=3 Tax=Helicobacter RepID=Q7VJV6_HELHP Length = 552 Score = 262 bits (670), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 176/543 (32%), Positives = 300/543 (55%), Gaps = 24/543 (4%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVD-AGLKSESAIPAEQFKNAQGELE 61 E FA LFE S K+ + G+I G +VAI + +V A KSE+ + + ++ G L Sbjct: 15 EDFAALFEASEKKADA--GAIQIGEIVAITDEYAMVALANEKSEAMLRLGEIQDDNGNLL 72 Query: 62 IQVGDEVDVALDAVEDGFGETLLSRE-KAKRH-EAWITLEKAYEDAETVTGVINGKVKGG 119 + D+++V + G + K+KR E + Y+D VI K KGG Sbjct: 73 FNINDKIEVFVTPGRGGRPNASYKKALKSKRIVEKIAQIADNYQDKIIEAKVIK-KNKGG 131 Query: 120 FTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 F +E +GI F+P +R + GK + ++ ++++ N+++VSR+ E ++ Sbjct: 132 FILEYDGIDVFMPRRDSAIREDDKAI---GKIYKVAIVNINKESNSIIVSRKRFFEIDDK 188 Query: 180 AERD---QLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVN 236 ++ +LLEN +G++ KGIVK + +G FVD+ GV+GL+H T+++ K +P++ Sbjct: 189 NRQNVSAKLLEN--DGVQ-KGIVKKIAPFGVFVDVYGVEGLVHYTELSHKGPINPAKNFK 245 Query: 237 VGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI 296 GDE+ VKVL +D ++ R+SL +K LG+DPW I K G + V+N+ YG FV++ Sbjct: 246 EGDEVVVKVLGYDEKKRRLSLSMKALGDDPWKEIEKELEVGYSIKVSVSNIEPYGAFVDL 305 Query: 297 EEGVEGLVHVSEMDWTNKNI-HPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQ 355 +EG +H+SE+ W +KNI HPS +NVG ++V +++ID + +R+ + LK+ P+ Sbjct: 306 GNDIEGFLHISEISW-DKNIKHPSSYLNVGQEIDVEIIEIDTDNKRLRVSLKKLLDKPFV 364 Query: 356 QFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEI 415 FA+TH G+ ++GKI ++TDFG F+ L GG+DGL+H D W+ + +K GDEI Sbjct: 365 YFAKTHQVGEIIKGKIATLTDFGAFVNL-GGVDGLLHNEDAYWD-KKSKCKDGFKVGDEI 422 Query: 416 AAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVE 475 ++++D E ER+SL K L P + +K + G + + G +++ D +E Sbjct: 423 EVKIIKIDKEHERVSLSKKLLEHSPAREFGKTHKVDDVARGSIIDIKDFGIFIKI-DEME 481 Query: 476 GYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVN 535 +R + + ED L G+E+E T +D +N + S++ + EK+ + N Sbjct: 482 ALIRNEDIQPLKKED----LKAGEEIECVITHIDEENNKVRASIKRLERQKEKETLKAFN 537 Query: 536 KQE 538 +E Sbjct: 538 SEE 540 >UniRef50_C6BYI5 RNA binding S1 domain protein n=4 Tax=Desulfovibrionales RepID=C6BYI5_DESAD Length = 503 Score = 261 bits (668), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 160/457 (35%), Positives = 256/457 (56%), Gaps = 16/457 (3%) Query: 3 ESFAQLFE--ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL 60 E+FA+LFE +S + G ++G V++I KD V VD G K + + ++ + +GEL Sbjct: 12 ENFAELFEAFQSESNDNLQVGDQIKGTVISITKDSVFVDTGSKVDGVVDRDELTDEEGEL 71 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 ++ GD V++ + ++ + E +LS+ + L +AYE+ V G + KGGF Sbjct: 72 TVKDGDTVELYVISMNNN--EIVLSKAMSGAG-GLNMLREAYENKVPVEGKVAETCKGGF 128 Query: 121 TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 V++ + F P S +D V D G F+VIK ++ N+VVSRR ++E E Sbjct: 129 RVKMMHRKVFCPVSQIDTSFVEDAEAFVGSTHNFQVIKFEENGRNIVVSRRVLLEQEQEK 188 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGD 239 R+ ++++Q ++G V L +GAFV+L GV+G++HI++++W R P ++V GD Sbjct: 189 AREAFMQDVQPDAVMEGKVTKLMPFGAFVELTPGVEGMVHISELSWSRSAKPEDVVQPGD 248 Query: 240 EITVKVLKFDRER----TRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVE 295 E++V++L + + ++ L LKQL DPW I ++ G K+TG V D+G FVE Sbjct: 249 EVSVRILSMEPRKDGKGLKIGLSLKQLQADPWDEIGDKFKAGDKVTGTVVRCADFGAFVE 308 Query: 296 IEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQ 355 I G+EGLVHVSEM +T + P V+ G V VMV DID +RRI L +K +PW Sbjct: 309 IAPGIEGLVHVSEMSYTKRVHKPEDEVSPGQEVAVMVKDIDPVKRRIGLSMKDAAGDPWM 368 Query: 356 QFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVRE-YKKGDE 414 +T G VEG +++ +FGIFI L GI GL+ +S I+ +G++A E K GD+ Sbjct: 369 DMEDTFKVGQEVEGTVENRAEFGIFINLAPGITGLLPMSRITR--SGKQAELEALKPGDK 426 Query: 415 IAAVVLQVDAERERISL--GVKQLAEDPFNNWVALNK 449 + + +++ +++L G Q A D N+W K Sbjct: 427 VKISIEEINTTDRKVTLTAGEAQKA-DGDNDWKEYTK 462 Score = 142 bits (357), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 83/251 (33%), Positives = 132/251 (52%), Gaps = 5/251 (1%) Query: 280 LTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEER 339 + G+VT L +G FVE+ GVEG+VH+SE+ W+ ++ P VV GD V V +L ++ + Sbjct: 203 MEGKVTKLMPFGAFVELTPGVEGMVHISELSWS-RSAKPEDVVQPGDEVSVRILSMEPRK 261 Query: 340 R----RISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSD 395 +I L LKQ +A+PW + + GD+V G + DFG F+ + GI+GLVH+S+ Sbjct: 262 DGKGLKIGLSLKQLQADPWDEIGDKFKAGDKVTGTVVRCADFGAFVEIAPGIEGLVHVSE 321 Query: 396 ISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVT 455 +S+ + E G E+A +V +D + RI L +K A DP+ + K G V Sbjct: 322 MSYTKRVHKPEDEVSPGQEVAVMVKDIDPVKRRIGLSMKDAAGDPWMDMEDTFKVGQEVE 381 Query: 456 GKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAI 515 G V G + LA G+ G L S +R + L GD+V+ ++ +R + Sbjct: 382 GTVENRAEFGIFINLAPGITGLLPMSRITRSGKQAELEALKPGDKVKISIEEINTTDRKV 441 Query: 516 SLSVRAKDEAD 526 +L+ +AD Sbjct: 442 TLTAGEAQKAD 452 >UniRef50_B8DPH9 RNA binding S1 domain protein n=4 Tax=Desulfovibrio vulgaris RepID=B8DPH9_DESVM Length = 564 Score = 259 bits (663), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 153/441 (34%), Positives = 238/441 (53%), Gaps = 17/441 (3%) Query: 4 SFAQLFEESLKEIET-RPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEI 62 SFA L E ET R G V+ VVAI +D V V G K + + ++ ++A+G L + Sbjct: 50 SFADLLEAHSGAAETVRTGERVKATVVAIGEDTVFVATGAKVDGLVDRKELEDAEGNLPV 109 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 VGD ++ L V E LSR +E A + G + G KGGF V Sbjct: 110 AVGDVLE--LYVVSANANEIKLSRAMGG-QVGLAQMEDALNAGIPIEGKVTGPCKGGFNV 166 Query: 123 ELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 E+ RAF P S +D+RP + G+ +F + +L+Q N+VVSRR ++E E + Sbjct: 167 EVLKRRAFCPASQMDLRPGAEPDSFTGQTFQFLITRLEQNGRNIVVSRRMLLEREQAESL 226 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEI 241 L+EN++EG ++G V L +GAFV++ G++G++H+++++W RV+ E V+VGD++ Sbjct: 227 SALMENVKEGDVLEGTVARLAPFGAFVEIAPGLEGMVHVSELSWSRVQQADEAVSVGDKV 286 Query: 242 TVKVL-----------KFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDY 290 VKVL K R+ R+SL ++Q+ DPW +A R LTG+VT L + Sbjct: 287 RVKVLGIAGAEEGKGGKDSRKGPRISLSIRQVSGDPWQDVADRLDADQILTGKVTRLAPF 346 Query: 291 GCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCK 350 G F+E+ GVEGLVH+SEM WT + P + V G+ V V + ++D R+R+SL L+ + Sbjct: 347 GAFIEVLPGVEGLVHLSEMSWTRRINKPEEAVTPGETVSVRIKELDPARKRLSLSLRDAE 406 Query: 351 ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYK 410 +PW E G V G ++ FG+F+ L G+ GL+ + ++ + Sbjct: 407 GDPWSTVEERFPAGSTVTGTVEKRAPFGLFVNLAPGVTGLLP-NAVAATSPQSKTYAGLN 465 Query: 411 KGDEIAAVVLQVDAERERISL 431 G E++ VV +D + RISL Sbjct: 466 PGAEVSLVVRDLDVKARRISL 486 Score = 128 bits (321), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 87/261 (33%), Positives = 130/261 (49%), Gaps = 12/261 (4%) Query: 269 AIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVV 328 A+ + EG L G V L +G FVEI G+EG+VHVSE+ W+ + V+VGD V Sbjct: 228 ALMENVKEGDVLEGTVARLAPFGAFVEIAPGLEGMVHVSELSWSRVQ-QADEAVSVGDKV 286 Query: 329 EVMVLDI---------DEERR--RISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDF 377 V VL I + R+ RISL ++Q +PWQ A+ + + GK+ + F Sbjct: 287 RVKVLGIAGAEEGKGGKDSRKGPRISLSIRQVSGDPWQDVADRLDADQILTGKVTRLAPF 346 Query: 378 GIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLA 437 G FI + G++GLVHLS++SW + G+ ++ + ++D R+R+SL ++ Sbjct: 347 GAFIEVLPGVEGLVHLSEMSWTRRINKPEEAVTPGETVSVRIKELDPARKRLSLSLRDAE 406 Query: 438 EDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSV 497 DP++ G+ VTG V G V LA GV G L + A+ L+ Sbjct: 407 GDPWSTVEERFPAGSTVTGTVEKRAPFGLFVNLAPGVTGLLPNAVAATSPQSKTYAGLNP 466 Query: 498 GDEVEAKFTGVDRKNRAISLS 518 G EV +D K R ISL+ Sbjct: 467 GAEVSLVVRDLDVKARRISLA 487 >UniRef50_C5CIV0 RNA binding S1 domain protein n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CIV0_KOSOT Length = 572 Score = 258 bits (660), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 170/498 (34%), Positives = 279/498 (56%), Gaps = 25/498 (5%) Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 E +GD+++V + V++ G +++S ++ A +E AY+ E VTG I G+ KGG+ Sbjct: 68 EYNIGDKIEVQIMKVDEDEGRSVVSEKRIYFRTALKKVENAYKSGEPVTGTILGETKGGY 127 Query: 121 TVEL-NGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKR--NNVVVSRRAVIESE 177 V+L N + AFLPGS +R R EG E EFKVI +K+ N+VVS A E + Sbjct: 128 NVKLLNVVPAFLPGSQSGIR--RGRPIPEG-EQEFKVINFRKKKRGTNIVVSLTAFKEEK 184 Query: 178 NSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVN 236 A E L+ G V+G ++++ D+GAFV L V GL+ ++++W + +++N Sbjct: 185 VKA----YFEALETGSTVEGTIESIKDFGAFVRLTNEVVGLIPASEVSWDPSQKVHDVLN 240 Query: 237 VGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI 296 VGD++TVKV+ D E+ ++SL LKQL EDPW + ++YP G+ + G V ++ +G FV I Sbjct: 241 VGDKVTVKVIDVDPEKKKISLSLKQLQEDPWNTVEEKYPVGSVVEGVVKSIVPFGFFVMI 300 Query: 297 EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQ 356 E GVEGLVH+SE+ W N +++ GD V+V + DID+E+R +SL ++ +PW Sbjct: 301 EPGVEGLVHISEVFWGNVRRDLKELIREGDRVKVKIKDIDKEKRTLSLSYREALGDPWDN 360 Query: 357 FAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAG--EEAVREYKKGDE 414 E + G+ V+GK+ + G + L+ + G V +S++SWN E+ V+E E Sbjct: 361 IEEKYKVGEIVDGKVVKVLPTGAIVELEEYVSGFVPVSEMSWNFVDRVEDVVKE---SSE 417 Query: 415 IAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVEL-ADG 473 + +L +D E R+ L +KQ EDP+ K G V GK+T + GA V + G Sbjct: 418 VKTKILSIDKENRRMRLSLKQATEDPWQKVHTELKVGDYVEGKITRLIKSGAVVMVDGYG 477 Query: 474 VEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGV------DRKNRAISLS--VRAKDEA 525 VE +L AS+ + RVE+ + +G+ K + D +N +S+ + K++ Sbjct: 478 VEAFLPASQVAMKRVENLEDAIKIGEHRRFKIIRLVYDPEKDVRNMVVSIKQLLLDKEKE 537 Query: 526 DEKDAIATVNKQEDANFS 543 + + A+ ++ +E + S Sbjct: 538 ETQKALEELSGEESSTLS 555 >UniRef50_C5S7U3 RNA binding S1 domain protein n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S7U3_CHRVI Length = 402 Score = 257 bits (656), Expect = 9e-67, Method: Compositional matrix adjust. Identities = 139/362 (38%), Positives = 217/362 (59%), Gaps = 18/362 (4%) Query: 1 MTESFAQLFEESLKEI-ETRP---------GSIVRGVVVAIDKDVVLVDAGLKSESAIPA 50 M+ES + FE+ L E +T P G V G ++AI ++ VD G KSE + Sbjct: 1 MSESAS--FEDLLNEFDQTHPQAQKGEPAVGDKVSGTLIAIGEEFAFVDLGAKSEGRLDL 58 Query: 51 EQFKNAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTG 110 ++A+G+L+ VGD V+ + ++ G LL + A ++ LE AY V G Sbjct: 59 AVIRDAEGQLKYAVGDTVETHVTGKDEESGMLLLGSQHAHKYHGVDELESAYRQGLPVQG 118 Query: 111 VINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLD-QKRNNVVVS 169 + G VKGG V++ G+RAF P S +D+R + D G++L+F++ K + +R N+VVS Sbjct: 119 QVTGAVKGGCEVQVAGVRAFCPASQIDIRFIEDLSEFVGQKLDFRITKFEGGRRPNLVVS 178 Query: 170 RRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVK 229 RRA++E E + ++L L+EG + G V +L DYGAFVDLGG++G++HI+ +A+ VK Sbjct: 179 RRALLEEEQRLKAEELRAQLKEGAVLTGTVTSLKDYGAFVDLGGLEGMIHISQLAFGHVK 238 Query: 230 HPSEIVNVGDEITVKVLKFD-----RERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRV 284 HP E++ VG I V VL+ + ++R +++L ++ L DPW+ +++P GT++ GRV Sbjct: 239 HPKEVLQVGQPIEVSVLRIEPATDAKKRDKIALSIRALSRDPWLDAIEQFPAGTRVQGRV 298 Query: 285 TNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISL 344 L +G F+E+ GV+GLVH+SE+ + HPS V+ GD V V+ +D ERRRISL Sbjct: 299 ARLQPFGAFIELAPGVDGLVHISELGAGRRVQHPSDVLKEGDEVTATVIGVDLERRRISL 358 Query: 345 GL 346 L Sbjct: 359 SL 360 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 84/261 (32%), Positives = 141/261 (54%), Gaps = 14/261 (5%) Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 D+L ++G+ V+G V G V + GV + + + ++ SE V G ++ Sbjct: 104 DELESAYRQGLPVQGQVTGAVKGGCEVQVAGVRAFCPASQIDIRFIEDLSEFV--GQKLD 161 Query: 243 VKVLKFDR-ERTRVSLGLKQLGEDPWVAIAK----RYPEGTKLTGRVTNLTDYGCFVEIE 297 ++ KF+ R + + + L E+ A+ + EG LTG VT+L DYG FV++ Sbjct: 162 FRITKFEGGRRPNLVVSRRALLEEEQRLKAEELRAQLKEGAVLTGTVTSLKDYGAFVDLG 221 Query: 298 EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDID-----EERRRISLGLKQCKAN 352 G+EG++H+S++ + + HP +V+ VG +EV VL I+ ++R +I+L ++ + Sbjct: 222 -GLEGMIHISQLAFGHVK-HPKEVLQVGQPIEVSVLRIEPATDAKKRDKIALSIRALSRD 279 Query: 353 PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKG 412 PW E G RV+G++ + FG FI L G+DGLVH+S++ + K+G Sbjct: 280 PWLDAIEQFPAGTRVQGRVARLQPFGAFIELAPGVDGLVHISELGAGRRVQHPSDVLKEG 339 Query: 413 DEIAAVVLQVDAERERISLGV 433 DE+ A V+ VD ER RISL + Sbjct: 340 DEVTATVIGVDLERRRISLSL 360 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 97/343 (28%), Positives = 165/343 (48%), Gaps = 26/343 (7%) Query: 192 GMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDR 250 G +V G + + + AFVDLG +G L D+A R VGD + V D Sbjct: 29 GDKVSGTLIAIGEEFAFVDLGAKSEGRL---DLAVIRDAEGQLKYAVGDTVETHVTGKDE 85 Query: 251 ERTRVSLGLKQLGEDPWV-AIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEM 309 E + LG + + V + Y +G + G+VT GC V++ GV S++ Sbjct: 86 ESGMLLLGSQHAHKYHGVDELESAYRQGLPVQGQVTGAVKGGCEVQVA-GVRAFCPASQI 144 Query: 310 DWTNKNIHPSKVVNVGDVVEVMVLDIDEERR------RISLGLKQCKANPWQQFAETHNK 363 D VG ++ + + RR R +L L++ + ++ + Sbjct: 145 DI---RFIEDLSEFVGQKLDFRITKFEGGRRPNLVVSRRAL-LEEEQRLKAEELRAQLKE 200 Query: 364 GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISW-NVAGEEAVREYKKGDEIAAVVLQV 422 G + G + S+ D+G F+ L GG++G++H+S +++ +V + V + G I VL++ Sbjct: 201 GAVLTGTVTSLKDYGAFVDL-GGLEGMIHISQLAFGHVKHPKEVLQV--GQPIEVSVLRI 257 Query: 423 DA-----ERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGY 477 + +R++I+L ++ L+ DP+ + + G V G+V + GA +ELA GV+G Sbjct: 258 EPATDAKKRDKIALSIRALSRDPWLDAIEQFPAGTRVQGRVARLQPFGAFIELAPGVDGL 317 Query: 478 LRASE-ASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSV 519 + SE + RV+ + VL GDEV A GVD + R ISLS+ Sbjct: 318 VHISELGAGRRVQHPSDVLKEGDEVTATVIGVDLERRRISLSL 360 >UniRef50_Q9ZKF6 30S ribosomal protein S1 n=44 Tax=Epsilonproteobacteria RepID=RS1_HELPJ Length = 552 Score = 256 bits (655), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 161/541 (29%), Positives = 289/541 (53%), Gaps = 19/541 (3%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKD--VVLVDAGLKSESAIPAEQFKNAQGEL 60 E FA+L E KE G+I G++V+I+++ +V G K+E + + + +G+L Sbjct: 15 EDFAKLLE---KEETLEKGTIKEGLIVSINENDGYAMVSVGGKTEGRLALNEITDEKGQL 71 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAET--VTGVINGKVKG 118 Q D + V + E G ++ ++ + + +E+ E+ E + G I GK KG Sbjct: 72 MYQKNDPIVVHVS--EKGEHPSVSYKKAISQQKIQAKIEELGENYENAIIEGKIVGKNKG 129 Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 G+ VE G+ FL S ++ D H+ GK ++ +I++D++ +++ +SR+ E + Sbjct: 130 GYIVESQGVEYFLSRSHSSLK--NDANHI-GKRIKACIIRVDKENHSINISRKRFFEVND 186 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVG 238 + + E L+ V G+V+ +T +G FV G+DGL+H ++++ K +P + G Sbjct: 187 KRQLEISKELLEATEPVLGVVRQITPFGIFVKFKGIDGLVHYSEISHKGPVNPEKYYKEG 246 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE 298 DE+ VK + +D E+ R+SL +K EDPW I + G + V+N+ YG FV+I Sbjct: 247 DEVYVKAIAYDEEKRRLSLSIKATIEDPWEEIQDKLKPGYAIKVVVSNIEHYGVFVDIGN 306 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFA 358 +EG +HVSE+ W HPS ++VG ++V ++DID + RR+ + LKQ P+ F Sbjct: 307 DIEGFLHVSEISWDKNVSHPSHYLSVGQEIDVKIIDIDPKNRRLRVSLKQLTNRPFDVFE 366 Query: 359 ETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAV 418 H GD VEGK+ ++TDFG F+ L GG+DGL+H D W+ ++ YK GD I Sbjct: 367 SKHQVGDIVEGKVATLTDFGAFLNL-GGVDGLLHNHDAFWD-KDKKCKDHYKIGDVIKVK 424 Query: 419 VLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYL 478 +L+++ + ++ISL K L P + +K +++ GKV ++ G + ADG++ + Sbjct: 425 ILKINKKDKKISLSAKHLVTSPTEEFAQKHKTDSVIQGKVVSIKDFGVFIH-ADGIDVLI 483 Query: 479 RASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQE 538 + + + + ++ + +G E+ +++ N + SV + EK+ + N + Sbjct: 484 KNEDLNPLKKDE----IKIGQEITCVVVAIEKSNNKVRASVHRLERKKEKEELQAFNTSD 539 Query: 539 D 539 D Sbjct: 540 D 540 >UniRef50_C0QM45 RpsA1 n=2 Tax=Desulfobacteraceae RepID=C0QM45_DESAH Length = 486 Score = 255 bits (651), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 153/449 (34%), Positives = 249/449 (55%), Gaps = 14/449 (3%) Query: 4 SFAQLFEESLKEI--ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE 61 SFA++F EI + R G + G +++I ++ V + G KS+ + + + GE Sbjct: 18 SFAEMFASYDAEINHDIRQGDKIDGKIISIGQNAVYISTGAKSDGVVDKAELLDKNGEFH 77 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 VGDE+ + + ++ + E LS+ + A + LE+A V G + G +KGGF+ Sbjct: 78 HAVGDEISLYVVSMNES--EITLSKSLSGAGTATM-LEEASFTGTPVEGKVAGTIKGGFS 134 Query: 122 VELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 V + G RAF P S +D++ + DT G F + + ++ N+VVSRR ++ EN Sbjct: 135 VTIMGKRAFCPVSQMDIKYIEDTESYVGSTFNFIITRFEEGGRNIVVSRRDLLNLENKDR 194 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 +D + +EG + G V L YGAF++L GV+G+ HI++++W RV E+V G+ Sbjct: 195 QDAFFKEAKEGDILTGSVTKLMPYGAFIELVPGVEGMAHISELSWSRVDKAEEVVKQGET 254 Query: 241 ITVKVLKFDR----ERTRVSLGLKQ-LGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVE 295 + VK+LK + + ++SL +KQ L EDPW + A G +LTG+V L +G FVE Sbjct: 255 VKVKLLKIETKEGADMPKISLSIKQALSEDPWDSQAGTIAPGDQLTGKVVRLAPFGAFVE 314 Query: 296 IEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQ 355 I G++GLVH+SEM T + + VV +G++V+V+V DID E+RRISL +K +PW Sbjct: 315 IAPGMDGLVHLSEMSHTRRIVKADDVVTLGEMVQVVVKDIDIEKRRISLSIKDALGDPWA 374 Query: 356 QFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEI 415 AE + G VE ++ FGIF+ L+ G+ GL+ S ++ + K GD++ Sbjct: 375 GIAEKYAPGTIVETTMEKREQFGIFLSLEPGVTGLLPAS-VASKASKPSDYDSLKPGDKV 433 Query: 416 AAVVLQVDAERERISLGVKQLAEDPFNNW 444 +V D E+ RISL ++ + ++W Sbjct: 434 TVMVESADEEKRRISLAPPEMKDS--DDW 460 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 120/420 (28%), Positives = 188/420 (44%), Gaps = 21/420 (5%) Query: 146 HLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQ-EGMEVKGIVKNLTD 204 H G E+ V+ +++ + + +S+ S + A +LE G V+G V Sbjct: 78 HAVGDEISLYVVSMNE--SEITLSK-----SLSGAGTATMLEEASFTGTPVEGKVAGTIK 130 Query: 205 YGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQL-- 262 G V + G ++ M K ++ V G + +F+ + + + L Sbjct: 131 GGFSVTIMGKRAFCPVSQMDIKYIEDTESYV--GSTFNFIITRFEEGGRNIVVSRRDLLN 188 Query: 263 --GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSK 320 +D A K EG LTG VT L YG F+E+ GVEG+ H+SE+ W+ + + Sbjct: 189 LENKDRQDAFFKEAKEGDILTGSVTKLMPYGAFIELVPGVEGMAHISELSWSRVD-KAEE 247 Query: 321 VVNVGDVVEVMVLDIDE----ERRRISLGLKQCKA-NPWQQFAETHNKGDRVEGKIKSIT 375 VV G+ V+V +L I+ + +ISL +KQ + +PW A T GD++ GK+ + Sbjct: 248 VVKQGETVKVKLLKIETKEGADMPKISLSIKQALSEDPWDSQAGTIAPGDQLTGKVVRLA 307 Query: 376 DFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQ 435 FG F+ + G+DGLVHLS++S +A G+ + VV +D E+ RISL +K Sbjct: 308 PFGAFVEIAPGMDGLVHLSEMSHTRRIVKADDVVTLGEMVQVVVKDIDIEKRRISLSIKD 367 Query: 436 LAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVL 495 DP+ G IV + + G + L GV G L AS AS+ L Sbjct: 368 ALGDPWAGIAEKYAPGTIVETTMEKREQFGIFLSLEPGVTGLLPASVASKASKPSDYDSL 427 Query: 496 SVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAAK 555 GD+V D + R ISL+ ++D+ A K + M EA K K Sbjct: 428 KPGDKVTVMVESADEEKRRISLAPPEMKDSDDWRKFAPAQKAPMGDMGALLM-EALKKKK 486 >UniRef50_B8J034 RNA binding S1 domain protein n=2 Tax=Desulfovibrio RepID=B8J034_DESDA Length = 489 Score = 253 bits (646), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 151/415 (36%), Positives = 231/415 (55%), Gaps = 9/415 (2%) Query: 21 GSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGFG 80 G V G V+AI D V VD G+K + + + +A G+ G+ V+ + V Sbjct: 35 GQKVTGTVIAITGDSVFVDVGIKVDGIMERKDILDADGKETTAPGEPVEAWVIGVS--AQ 92 Query: 81 ETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRP 140 E LSR + A LE+A + A V G I G KGG+TVE+ G AF PGS + + Sbjct: 93 EIRLSRSMSGSGVA--ALEEARDAALPVDGRIAGSCKGGYTVEVLGKTAFCPGSQIGLAS 150 Query: 141 VRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVK 200 D L G+ L+F VI+++ + N+VVSRRA+++ E + + LLE L G V+G + Sbjct: 151 AEDAETLTGRTLQFLVIRVENRGRNIVVSRRALLDRERQEQLEALLEKLGVGDTVEGKIS 210 Query: 201 NLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVL---KFDRERTRVS 256 +GAF++L V+G++H+++++W RV P E V++GD + KVL K D+ + R++ Sbjct: 211 RFAPFGAFMELDTAVEGMIHLSELSWSRVGAPDEAVSLGDTVRAKVLSISKSDKGQVRIA 270 Query: 257 LGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNI 316 L KQ DPW + +R G + G+V L +G FVEI G+EGLVH+SE+ WT + Sbjct: 271 LSRKQAEGDPWQDVTQRLENGAVVQGKVVRLAPFGAFVEILPGIEGLVHISELSWTKRVN 330 Query: 317 HPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITD 376 P +++ VGD+V V + +I+ + RRISL L+ + +PWQ A+ G V+G ++ + Sbjct: 331 KPEEILQVGDIVAVKIKEINADSRRISLSLRDAEGDPWQDAAQQFAPGSIVQGIVEGRST 390 Query: 377 FGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISL 431 +G+FI L GI GL+ I N + KGD + VV +D RISL Sbjct: 391 YGLFITLAPGITGLLPAGIIK-NAKNAGQYSKLDKGDSVTLVVQNLDTAARRISL 444 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 87/293 (29%), Positives = 144/293 (49%), Gaps = 8/293 (2%) Query: 269 AIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVV 328 A+ ++ G + G+++ +G F+E++ VEG++H+SE+ W+ P + V++GD V Sbjct: 194 ALLEKLGVGDTVEGKISRFAPFGAFMELDTAVEGMIHLSELSWSRVG-APDEAVSLGDTV 252 Query: 329 EVMVLDI---DEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDG 385 VL I D+ + RI+L KQ + +PWQ + G V+GK+ + FG F+ + Sbjct: 253 RAKVLSISKSDKGQVRIALSRKQAEGDPWQDVTQRLENGAVVQGKVVRLAPFGAFVEILP 312 Query: 386 GIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWV 445 GI+GLVH+S++SW + + GD +A + +++A+ RISL ++ DP+ + Sbjct: 313 GIEGLVHISELSWTKRVNKPEEILQVGDIVAVKIKEINADSRRISLSLRDAEGDPWQDAA 372 Query: 446 ALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKF 505 G+IV G V G + LA G+ G L A + L GD V Sbjct: 373 QQFAPGSIVQGIVEGRSTYGLFITLAPGITGLLPAGIIKNAKNAGQYSKLDKGDSVTLVV 432 Query: 506 TGVDRKNRAISLSVRAKD---EADEKDAIATVNKQE-DANFSNNAMAEAFKAA 554 +D R ISL+ + AD+K +K AN N +A+A A Sbjct: 433 QNLDTAARRISLAPEGSEASFSADDKAWKQHASKGSGSANTGMNTLAQALHKA 485 >UniRef50_B8CWY2 4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWY2_HALOH Length = 678 Score = 251 bits (640), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 138/338 (40%), Positives = 218/338 (64%), Gaps = 5/338 (1%) Query: 19 RPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQV---GDEVDVALDAV 75 + G V+G VV I + V VD G K+E IP + + E ++ G+E+DV + + Sbjct: 304 KKGQQVKGKVVEIGDNGVYVDVGYKTEGLIPLRELSHRDFEDPHEIVEEGEEIDVIVLTL 363 Query: 76 EDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSL 135 ED G +LS+++A +AW + KAYE+ E + + +VKGG V++ G+R F+ S Sbjct: 364 EDEEGNMVLSKKRADFEKAWERILKAYENDEIIEAEVTREVKGGLVVDI-GLRGFVHASH 422 Query: 136 VDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEV 195 V + V D GK L KVI++++ +NNVV+S + V+E E ++++ LE LQEG V Sbjct: 423 VAIGYVEDLSDYVGKTLRLKVIEVERDKNNVVLSAKKVLEEEREKQKEKTLEELQEGQVV 482 Query: 196 KGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRV 255 KG V + D+GAFVDLGG++GLLHI++M+W R++HPSE++ G EI VKVL ++E R+ Sbjct: 483 KGKVTKIVDFGAFVDLGGIEGLLHISEMSWGRIEHPSEVLEEGQEIEVKVLAVNKEEERI 542 Query: 256 SLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKN 315 SLGLKQL DPW AK++ EG ++G +T + D+G F+EIE G+EGL+H+S++ + Sbjct: 543 SLGLKQLLPDPWEEFAKKHYEGEVVSGTITKIVDFGAFMEIENGIEGLIHISQLSHRHVK 602 Query: 316 IHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP 353 P +VV+VG+ ++ +++ID E++R+ L +K + P Sbjct: 603 T-PDEVVSVGEEIKAEIINIDPEQKRVGLSIKALEEQP 639 Score = 154 bits (389), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 113/363 (31%), Positives = 192/363 (52%), Gaps = 25/363 (6%) Query: 188 NLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVL 246 +L++G +VKG V + D G +VD+G +GL+ + +++ + + P EIV G+EI V VL Sbjct: 302 DLKKGQQVKGKVVEIGDNGVYVDVGYKTEGLIPLRELSHRDFEDPHEIVEEGEEIDVIVL 361 Query: 247 KFDRERTRVSLGLKQLG-EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVH 305 + E + L K+ E W I K Y + VT G V+I G+ G VH Sbjct: 362 TLEDEEGNMVLSKKRADFEKAWERILKAYENDEIIEAEVTREVKGGLVVDI--GLRGFVH 419 Query: 306 VSEM------DWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC----KANPWQ 355 S + D ++ VG + + V++++ ++ + L K+ + + Sbjct: 420 ASHVAIGYVEDLSD---------YVGKTLRLKVIEVERDKNNVVLSAKKVLEEEREKQKE 470 Query: 356 QFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEI 415 + E +G V+GK+ I DFG F+ L GGI+GL+H+S++SW E ++G EI Sbjct: 471 KTLEELQEGQVVKGKVTKIVDFGAFVDL-GGIEGLLHISEMSWGRI-EHPSEVLEEGQEI 528 Query: 416 AAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVE 475 VL V+ E ERISLG+KQL DP+ + + +G +V+G +T + GA +E+ +G+E Sbjct: 529 EVKVLAVNKEEERISLGLKQLLPDPWEEFAKKHYEGEVVSGTITKIVDFGAFMEIENGIE 588 Query: 476 GYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVN 535 G + S+ S V+ V+SVG+E++A+ +D + + + LS++A +E E Sbjct: 589 GLIHISQLSHRHVKTPDEVVSVGEEIKAEIINIDPEQKRVGLSIKALEEQPETPKKVEAP 648 Query: 536 KQE 538 K+E Sbjct: 649 KKE 651 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 107/304 (35%), Positives = 176/304 (57%), Gaps = 27/304 (8%) Query: 148 EGKELEFKVIKLDQKRNNVVVSR-RAVIESE-----NSAERDQLLENLQEGMEVKGIVKN 201 EG+E++ V+ L+ + N+V+S+ RA E + E D+++E + EVKG Sbjct: 352 EGEEIDVIVLTLEDEEGNMVLSKKRADFEKAWERILKAYENDEIIE-AEVTREVKG---- 406 Query: 202 LTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQ 261 G VD+G + G +H + +A V+ S+ V G + +KV++ +R++ V L K+ Sbjct: 407 ----GLVVDIG-LRGFVHASHVAIGYVEDLSDYV--GKTLRLKVIEVERDKNNVVLSAKK 459 Query: 262 L----GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIH 317 + E + EG + G+VT + D+G FV++ G+EGL+H+SEM W H Sbjct: 460 VLEEEREKQKEKTLEELQEGQVVKGKVTKIVDFGAFVDLG-GIEGLLHISEMSWGRIE-H 517 Query: 318 PSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDF 377 PS+V+ G +EV VL +++E RISLGLKQ +PW++FA+ H +G+ V G I I DF Sbjct: 518 PSEVLEEGQEIEVKVLAVNKEEERISLGLKQLLPDPWEEFAKKHYEGEVVSGTITKIVDF 577 Query: 378 GIFIGLDGGIDGLVHLSDISW-NVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQL 436 G F+ ++ GI+GL+H+S +S +V + V G+EI A ++ +D E++R+ L +K L Sbjct: 578 GAFMEIENGIEGLIHISQLSHRHVKTPDEV--VSVGEEIKAEIINIDPEQKRVGLSIKAL 635 Query: 437 AEDP 440 E P Sbjct: 636 EEQP 639 >UniRef50_A8ZTZ3 RNA binding S1 domain protein n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZTZ3_DESOH Length = 492 Score = 249 bits (637), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 149/438 (34%), Positives = 237/438 (54%), Gaps = 12/438 (2%) Query: 2 TESFAQLFEESLKEI--ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE 59 TE FA L E + ++ E R G + G ++AI KD V + G KS+ + + + GE Sbjct: 19 TEDFAALLESYMTDMKPEVRVGDKITGEIIAIGKDAVFFNTGTKSDGVVEKAELLDENGE 78 Query: 60 LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGG 119 L +VGD +D+ + DG E LS+ + E A+++ V G + KGG Sbjct: 79 LPHKVGDRLDLYVVDTRDG--EIRLSKAMGAGSGVDMLYE-AHQNRIPVEGKVIETCKGG 135 Query: 120 FTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 F +++ G AF P S +DV V G F + +++ + N+VV+RR ++E E + Sbjct: 136 FRIQVMGQTAFCPVSQMDVHYVEKPEEFVGAVFPFLIERIEARGKNLVVNRRRLLEQEQA 195 Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVG 238 +R++ L + G V G V + YGAF++L GV+G++HI++++W RV PSE+ VG Sbjct: 196 EQREKFLAQARPGDIVDGRVVRIMPYGAFMELQPGVEGMVHISELSWSRVGDPSEVTAVG 255 Query: 239 DEITVKVLKFDRERTR-----VSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCF 293 + + V++L DR ++ +SL KQ DPW + ++Y EG K+ G+VT D+G F Sbjct: 256 EVLPVRILAIDRTGSKTGGLKISLSAKQAAVDPWKTVGEKYKEGDKIEGKVTRCADFGAF 315 Query: 294 VEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP 353 VE+E G+EGLVH+SEM T + + V GD V VMV +D RR+SL +K + +P Sbjct: 316 VEVEPGIEGLVHISEMSHTRRVVKAEDVARPGDRVAVMVTSVDPVNRRLSLSIKAAEGDP 375 Query: 354 WQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGD 413 W A G V G ++ + DFG FI L G+ GL+ S + A +A+ + K D Sbjct: 376 WLTVANRMAVGQTVSGTVERVLDFGCFISLAPGVTGLMPRSSME-RAADPKAMEKLKADD 434 Query: 414 EIAAVVLQVDAERERISL 431 + + ++ ++ISL Sbjct: 435 PVTVKIETINLADKKISL 452 Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 111/354 (31%), Positives = 164/354 (46%), Gaps = 30/354 (8%) Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 D L E Q + V+G V G + + G ++ M V+ P E V Sbjct: 112 DMLYEAHQNRIPVEGKVIETCKGGFRIQVMGQTAFCPVSQMDVHYVEKPEEFVGA----- 166 Query: 243 VKVLKFDRER----------TRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGC 292 V F ER R L ++ E +A+ P G + GRV + YG Sbjct: 167 --VFPFLIERIEARGKNLVVNRRRLLEQEQAEQREKFLAQARP-GDIVDGRVVRIMPYGA 223 Query: 293 FVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRR-----ISLGLK 347 F+E++ GVEG+VH+SE+ W+ PS+V VG+V+ V +L ID + ISL K Sbjct: 224 FMELQPGVEGMVHISELSWSRVG-DPSEVTAVGEVLPVRILAIDRTGSKTGGLKISLSAK 282 Query: 348 QCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWN---VAGEE 404 Q +PW+ E + +GD++EGK+ DFG F+ ++ GI+GLVH+S++S V E+ Sbjct: 283 QAAVDPWKTVGEKYKEGDKIEGKVTRCADFGAFVEVEPGIEGLVHISEMSHTRRVVKAED 342 Query: 405 AVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAK 464 R GD +A +V VD R+SL +K DP+ G V+G V V Sbjct: 343 VAR---PGDRVAVMVTSVDPVNRRLSLSIKAAEGDPWLTVANRMAVGQTVSGTVERVLDF 399 Query: 465 GATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLS 518 G + LA GV G + S R A L D V K ++ ++ ISL+ Sbjct: 400 GCFISLAPGVTGLMPRSSMERAADPKAMEKLKADDPVTVKIETINLADKKISLA 453 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 66/189 (34%), Positives = 99/189 (52%), Gaps = 10/189 (5%) Query: 339 RRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISW 398 RRR+ L+Q +A ++F GD V+G++ I +G F+ L G++G+VH+S++SW Sbjct: 186 RRRL---LEQEQAEQREKFLAQARPGDIVDGRVVRIMPYGAFMELQPGVEGMVHISELSW 242 Query: 399 NVAGEEAVREYKKGDEIAAVVLQVDAERER-----ISLGVKQLAEDPFNNWVALNKKGAI 453 + G+ + G+ + +L +D + ISL KQ A DP+ K+G Sbjct: 243 SRVGDPS-EVTAVGEVLPVRILAIDRTGSKTGGLKISLSAKQAAVDPWKTVGEKYKEGDK 301 Query: 454 VTGKVTAVDAKGATVELADGVEGYLRASEASRDR-VEDATLVLSVGDEVEAKFTGVDRKN 512 + GKVT GA VE+ G+EG + SE S R V A V GD V T VD N Sbjct: 302 IEGKVTRCADFGAFVEVEPGIEGLVHISEMSHTRRVVKAEDVARPGDRVAVMVTSVDPVN 361 Query: 513 RAISLSVRA 521 R +SLS++A Sbjct: 362 RRLSLSIKA 370 >UniRef50_A8F7S1 RNA binding S1 domain protein n=1 Tax=Thermotoga lettingae TMO RepID=A8F7S1_THELT Length = 539 Score = 247 bits (630), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 158/509 (31%), Positives = 273/509 (53%), Gaps = 25/509 (4%) Query: 1 MTESFAQL--FEESLKEIETRPGSIVRGVVVAIDK-DVVLVDAGLKSESAIPAEQFKNAQ 57 MT+ ++ F+E L +ET PGS+V VV I+ + + VD G K E I + ++ Sbjct: 1 MTDEHEKMENFQEYLDFVETNPGSVVEAVVTRINPAEGISVDFGGKGEGIIQQNELIHSI 60 Query: 58 GELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVK 117 + VG ++ + + D G LLS ++ E TL KAYE V G I + Sbjct: 61 EKY--SVGQKIKAQILKINDEEGYALLSEKRPYIREMRNTLRKAYESKIPVKGKIVQTIP 118 Query: 118 GGFTVELNGI-RAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRN--NVVVSRRAVI 174 GG+ V ++ I AFLPGS ++ + KE+ F +I+ +RN ++VVSR+A++ Sbjct: 119 GGYRVLISNIFDAFLPGSQ---SLLKRNQSFQEKEMNFLIIEYSVRRNKLHIVVSRKALL 175 Query: 175 ESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEI 234 E + + + G E++G V+++ A +D G+ L ++M+ P +I Sbjct: 176 ERL----KKEFFNTHKVGDEIEGTVESIRMNHAIIDFDGIKAFLPRSEMSHDPSVSPDDI 231 Query: 235 VNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFV 294 + D+I VK+++ + R+ +++ LK L DPW+ +++RY GT + G V ++ +G F+ Sbjct: 232 LKKNDQIKVKIIEINPARSSITVSLKALEPDPWLKVSERYSVGTVVQGTVKSIMPFGIFL 291 Query: 295 EIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPW 354 +E G++GL+H+SE+ WT+K K +G +V+ V++ID E+ RI+L K+ K +PW Sbjct: 292 NLEPGLDGLIHISEVFWTSKKADLHKYFKIGQIVQAEVIEIDPEKHRIALSYKKAKGDPW 351 Query: 355 QQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDE 414 ++ + +N+GD V GKI I G+ + L+ G+ G V S++SWN ++ +K+ D Sbjct: 352 EEVVQKYNEGDVVSGKIVRILPAGVIVELEDGVSGFVPKSELSWNKV-KDPTDLFKEKDR 410 Query: 415 IAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELAD-G 473 + +L +D ++ R+ L VKQL DP++ V + ++ V + G +EL D Sbjct: 411 LNVKILSIDKQKRRMRLSVKQLTPDPWDEVVTKLSENSVAKALVKSKVNSGFIIELKDFS 470 Query: 474 VEGYLRASEASRDRVEDATLVLSVGDEVE 502 ++G + AS A L GDEVE Sbjct: 471 IDGLMPASHADES--------LKEGDEVE 491 >UniRef50_C0GUF0 RNA binding S1 domain protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GUF0_9DELT Length = 476 Score = 245 bits (626), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 157/436 (36%), Positives = 237/436 (54%), Gaps = 12/436 (2%) Query: 3 ESFAQLFEESLKE--IETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL 60 +SFA++ ES E E PG VRG +++I KD V VD G K++ E +++G L Sbjct: 8 QSFARMLAESEMESGPELEPGDRVRGKIISIGKDHVYVDTGTKTDGVADREDLLDSEGNL 67 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 ++ GD V+ L V GE L+ H L +A E V G + KGGF Sbjct: 68 ALEEGDSVE--LFVVSRHQGEIRLASSFGA-HGGVQQLMQAMEQEIPVQGKVKETCKGGF 124 Query: 121 TVELNGIR-AFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 V++ G AF P S +D R V D+ L G+ + F V +++ N+VVSRRA+ + E + Sbjct: 125 RVQVMGNHLAFCPMSQMDNRMVEDSQSLVGESMTFLVSRVEANGRNIVVSRRALKDKEQA 184 Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVG 238 + N + G ++G V + YG FV++ G++GL+HI++M+W R P EIV+VG Sbjct: 185 ESLHEFSRNYKPGDVLQGTVTRVEPYGVFVEVAPGLEGLVHISEMSWSRSLAPEEIVSVG 244 Query: 239 DEITVKVLKF---DRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVE 295 D ++V +L D+ + R+ L +KQ DPW +I + + G+ + G VT + +G FVE Sbjct: 245 DTVSVHLLGIEEKDKGQVRIGLSMKQAQADPWESITENFEPGSVVEGVVTRVAPFGAFVE 304 Query: 296 IEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQ 355 I G+EGLVHVSEM + + P + V G V V V ID RRISL ++ + +PW+ Sbjct: 305 ISPGLEGLVHVSEMSYLKRVSKPEEEVQPGQKVRVKVKGIDSLERRISLSMRDAQGDPWE 364 Query: 356 QFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEI 415 + + KG VEGK++ DFG+ + L+ G+ GLV S + N + ++ K GD + Sbjct: 365 GVSTRYEKGTLVEGKMEKQEDFGMLVALEPGVVGLVPRSILHQN--QDSSLTNKKPGDRV 422 Query: 416 AAVVLQVDAERERISL 431 V VD RISL Sbjct: 423 NVAVESVDEANRRISL 438 Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 104/343 (30%), Positives = 176/343 (51%), Gaps = 14/343 (4%) Query: 184 QLLENLQEGMEVKGIVKNLTDYGAFVD-LGGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 QL++ +++ + V+G VK G V +G ++ M + V+ +V G+ +T Sbjct: 101 QLMQAMEQEIPVQGKVKETCKGGFRVQVMGNHLAFCPMSQMDNRMVEDSQSLV--GESMT 158 Query: 243 VKVLKFDRERTRVSLGLKQLGE----DPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE 298 V + + + + + L + + ++ Y G L G VT + YG FVE+ Sbjct: 159 FLVSRVEANGRNIVVSRRALKDKEQAESLHEFSRNYKPGDVLQGTVTRVEPYGVFVEVAP 218 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERR---RISLGLKQCKANPWQ 355 G+EGLVH+SEM W+ +++ P ++V+VGD V V +L I+E+ + RI L +KQ +A+PW+ Sbjct: 219 GLEGLVHISEMSWS-RSLAPEEIVSVGDTVSVHLLGIEEKDKGQVRIGLSMKQAQADPWE 277 Query: 356 QFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEI 415 E G VEG + + FG F+ + G++GLVH+S++S+ + E + G ++ Sbjct: 278 SITENFEPGSVVEGVVTRVAPFGAFVEISPGLEGLVHVSEMSYLKRVSKPEEEVQPGQKV 337 Query: 416 AAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVE 475 V +D+ RISL ++ DP+ +KG +V GK+ + G V L GV Sbjct: 338 RVKVKGIDSLERRISLSMRDAQGDPWEGVSTRYEKGTLVEGKMEKQEDFGMLVALEPGVV 397 Query: 476 GYLRASEASRDRVEDATLV-LSVGDEVEAKFTGVDRKNRAISL 517 G + S ++ +D++L GD V VD NR ISL Sbjct: 398 GLVPRSILHQN--QDSSLTNKKPGDRVNVAVESVDEANRRISL 438 >UniRef50_B8G2Q3 Hydroxymethylbutenyl pyrophosphate reductase n=2 Tax=Desulfitobacterium hafniense RepID=B8G2Q3_DESHD Length = 661 Score = 245 bits (626), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 130/330 (39%), Positives = 207/330 (62%), Gaps = 5/330 (1%) Query: 21 GSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA---QGELEIQVGDEVDVALDAVED 77 G++V G VV I+ D V VD G KSE I ++ A Q + +GD++ + VE+ Sbjct: 298 GALVTGTVVKINHDEVFVDLGWKSEGVIALKELTVASDLQTSDIVAIGDQISAVVLRVEN 357 Query: 78 GFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVD 137 G +LS+ +A A L++ E E + G + VKGG V++ G+R F+P S + Sbjct: 358 EEGNPVLSKRRADEMAAVDKLKELAESKEEIQGKVADVVKGGLIVDV-GMRGFVPASQIQ 416 Query: 138 VRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKG 197 V D +G+ L +VI+ D + VV+S++ +++ E +A+++ LL LQEG V G Sbjct: 417 PGYVEDLNQFKGQTLRLRVIEFDPAKRRVVLSQKEILQEEQAAKKEHLLATLQEGDVVSG 476 Query: 198 IVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSL 257 +VK L +GAFVD+GGVDGLLH++D+A+ R+KHPSE VNVGDE+ V++LK D+E+ ++SL Sbjct: 477 VVKRLAQFGAFVDIGGVDGLLHVSDIAYTRIKHPSEYVNVGDEVEVQILKVDKEQGKISL 536 Query: 258 GLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIH 317 GLKQL PW + ++Y G+ +TG+V + +G FV++E+G++ L+H+S++ N Sbjct: 537 GLKQLKPSPWESAPEKYALGSLVTGKVVRIAPFGAFVQLEDGIDALIHISQLSEKRVN-K 595 Query: 318 PSKVVNVGDVVEVMVLDIDEERRRISLGLK 347 VV VGD+V+ V++ E +RISL ++ Sbjct: 596 VEDVVKVGDMVQAKVIECKPEEKRISLSIR 625 Score = 141 bits (356), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 98/294 (33%), Positives = 166/294 (56%), Gaps = 21/294 (7%) Query: 149 GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAF 208 G ++ V++++ + N V+S+R ++ A D+L E + E++G V ++ G Sbjct: 345 GDQISAVVLRVENEEGNPVLSKR---RADEMAAVDKLKELAESKEEIQGKVADVVKGGLI 401 Query: 209 VDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWV 268 VD+G + G + + + V+ ++ G + ++V++FD + RV L K++ ++ Sbjct: 402 VDVG-MRGFVPASQIQPGYVEDLNQFK--GQTLRLRVIEFDPAKRRVVLSQKEILQEEQA 458 Query: 269 A----IAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNV 324 A + EG ++G V L +G FV+I GV+GL+HVS++ +T HPS+ VNV Sbjct: 459 AKKEHLLATLQEGDVVSGVVKRLAQFGAFVDIG-GVDGLLHVSDIAYTRIK-HPSEYVNV 516 Query: 325 GDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLD 384 GD VEV +L +D+E+ +ISLGLKQ K +PW+ E + G V GK+ I FG F+ L+ Sbjct: 517 GDEVEVQILKVDKEQGKISLGLKQLKPSPWESAPEKYALGSLVTGKVVRIAPFGAFVQLE 576 Query: 385 GGIDGLVHLSDISWNVAGEEAVRE----YKKGDEIAAVVLQVDAERERISLGVK 434 GID L+H+S +S E+ V + K GD + A V++ E +RISL ++ Sbjct: 577 DGIDALIHISQLS-----EKRVNKVEDVVKVGDMVQAKVIECKPEEKRISLSIR 625 Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 108/346 (31%), Positives = 178/346 (51%), Gaps = 23/346 (6%) Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 ++NL G V G V + FVDLG +G++ + ++ S+IV +GD+I+ Sbjct: 292 MQNLHRGALVTGTVVKINHDEVFVDLGWKSEGVIALKELTVASDLQTSDIVAIGDQISAV 351 Query: 245 VLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTK-LTGRVTNLTDYGCFVEIEEGVEGL 303 VL+ + E L ++ E V K E + + G+V ++ G V++ G+ G Sbjct: 352 VLRVENEEGNPVLSKRRADEMAAVDKLKELAESKEEIQGKVADVVKGGLIVDV--GMRGF 409 Query: 304 VHVSEMDWTNKNIHPSKVVNV----GDVVEVMVLDIDEERRRISLG----LKQCKANPWQ 355 V S+ I P V ++ G + + V++ D +RR+ L L++ +A + Sbjct: 410 VPASQ-------IQPGYVEDLNQFKGQTLRLRVIEFDPAKRRVVLSQKEILQEEQAAKKE 462 Query: 356 QFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKK-GDE 414 T +GD V G +K + FG F+ + GG+DGL+H+SDI++ + EY GDE Sbjct: 463 HLLATLQEGDVVSGVVKRLAQFGAFVDI-GGVDGLLHVSDIAYTRIKHPS--EYVNVGDE 519 Query: 415 IAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGV 474 + +L+VD E+ +ISLG+KQL P+ + G++VTGKV + GA V+L DG+ Sbjct: 520 VEVQILKVDKEQGKISLGLKQLKPSPWESAPEKYALGSLVTGKVVRIAPFGAFVQLEDGI 579 Query: 475 EGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 + + S+ S RV V+ VGD V+AK + + ISLS+R Sbjct: 580 DALIHISQLSEKRVNKVEDVVKVGDMVQAKVIECKPEEKRISLSIR 625 >UniRef50_A9AV75 RNA binding S1 domain protein n=5 Tax=Chloroflexi (class) RepID=A9AV75_HERA2 Length = 415 Score = 243 bits (620), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 132/355 (37%), Positives = 212/355 (59%), Gaps = 17/355 (4%) Query: 8 LFEESLKEI-----ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE--L 60 L EE L++ + G V G +V +D+D VLVD G KSE +P + + E Sbjct: 36 LLEEYLRDPAHDYRNLKYGDSVDGTIVRVDRDEVLVDIGSKSEGVVPGREMTSLSSEERA 95 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 E++VGD + V + ED G +LS +KA++ ++W L+ +E + + + KGG Sbjct: 96 ELKVGDVLLVTVVQTEDAEGRIVLSIDKARQEKSWRALQVNHEAGDVIHAAVTNYNKGGL 155 Query: 121 TVELNGIRAFLPGSLV-------DVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAV 173 V L+G+R F+P S V DV+ D L G+ L K+I++++ RN +++S R Sbjct: 156 LVNLSGVRGFVPSSQVSSVSRGSDVQKQSDMAKLVGQTLPLKIIEINRSRNRLILSERQA 215 Query: 174 IESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSE 233 ++ + +DQLLE L+ G G V +L D+GAFVD+GG DGL+H+++++W RVKHP E Sbjct: 216 VQEVRDSRKDQLLEKLEPGAVRTGRVTSLCDFGAFVDIGGADGLVHLSELSWSRVKHPEE 275 Query: 234 IVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCF 293 ++ VGD ++V +L D ++ R++L +K+ +PW + RY G ++G VT LT +G F Sbjct: 276 VLKVGDAVSVYILSVDEDKKRIALSIKRTQAEPWTTVTDRYQIGQSVSGVVTQLTAFGAF 335 Query: 294 VEIEEGVEGLVHVSEMDWTNKNI-HPSKVVNVGDVVEVMVLDIDEERRRISLGLK 347 V +E+G+EGL+H+SEM +++ I HP V+N GD V ++ ID R+RI L + Sbjct: 336 VRLEDGIEGLIHISEM--SDERIQHPRDVINEGDSVSARIIRIDPTRKRIGLSTR 388 Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 82/260 (31%), Positives = 148/260 (56%), Gaps = 20/260 (7%) Query: 188 NLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKR----VKHPSEIVN-VGDEIT 242 N + G + V N G V+L GV G + + ++ V+ S++ VG + Sbjct: 136 NHEAGDVIHAAVTNYNKGGLLVNLSGVRGFVPSSQVSSVSRGSDVQKQSDMAKLVGQTLP 195 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVA----IAKRYPEGTKLTGRVTNLTDYGCFVEIEE 298 +K+++ +R R R+ L +Q ++ + + ++ G TGRVT+L D+G FV+I Sbjct: 196 LKIIEINRSRNRLILSERQAVQEVRDSRKDQLLEKLEPGAVRTGRVTSLCDFGAFVDIG- 254 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFA 358 G +GLVH+SE+ W+ HP +V+ VGD V V +L +DE+++RI+L +K+ +A PW Sbjct: 255 GADGLVHLSELSWSRVK-HPEEVLKVGDAVSVYILSVDEDKKRIALSIKRTQAEPWTTVT 313 Query: 359 ETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYK----KGDE 414 + + G V G + +T FG F+ L+ GI+GL+H+S++S +E ++ + +GD Sbjct: 314 DRYQIGQSVSGVVTQLTAFGAFVRLEDGIEGLIHISEMS-----DERIQHPRDVINEGDS 368 Query: 415 IAAVVLQVDAERERISLGVK 434 ++A ++++D R+RI L + Sbjct: 369 VSARIIRIDPTRKRIGLSTR 388 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 103/345 (29%), Positives = 172/345 (49%), Gaps = 16/345 (4%) Query: 188 NLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVL 246 NL+ G V G + + VD+G +G++ +M + +E+ VGD + V V+ Sbjct: 50 NLKYGDSVDGTIVRVDRDEVLVDIGSKSEGVVPGREMTSLSSEERAEL-KVGDVLLVTVV 108 Query: 247 KFDRERTRVSLGL-KQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVH 305 + + R+ L + K E W A+ + G + VTN G V + GV G V Sbjct: 109 QTEDAEGRIVLSIDKARQEKSWRALQVNHEAGDVIHAAVTNYNKGGLLVNLS-GVRGFVP 167 Query: 306 VSEMDWTNKNIHPSKVVN----VGDVVEVMVLDIDEERRRISLGLKQC----KANPWQQF 357 S++ ++ K + VG + + +++I+ R R+ L +Q + + Q Sbjct: 168 SSQVSSVSRGSDVQKQSDMAKLVGQTLPLKIIEINRSRNRLILSERQAVQEVRDSRKDQL 227 Query: 358 AETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWN-VAGEEAVREYKKGDEIA 416 E G G++ S+ DFG F+ + GG DGLVHLS++SW+ V E V K GD ++ Sbjct: 228 LEKLEPGAVRTGRVTSLCDFGAFVDI-GGADGLVHLSELSWSRVKHPEEV--LKVGDAVS 284 Query: 417 AVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEG 476 +L VD +++RI+L +K+ +P+ + G V+G VT + A GA V L DG+EG Sbjct: 285 VYILSVDEDKKRIALSIKRTQAEPWTTVTDRYQIGQSVSGVVTQLTAFGAFVRLEDGIEG 344 Query: 477 YLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRA 521 + SE S +R++ V++ GD V A+ +D + I LS R+ Sbjct: 345 LIHISEMSDERIQHPRDVINEGDSVSARIIRIDPTRKRIGLSTRS 389 >UniRef50_A6CB07 30S ribosomal protein S1 n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CB07_9PLAN Length = 572 Score = 242 bits (618), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 133/333 (39%), Positives = 199/333 (59%), Gaps = 16/333 (4%) Query: 21 GSIVRGVVVAIDKDVVLVDAGLKS---ESAIPAEQFKNAQGELEIQVGDEVDVALDAVED 77 G ++GVV +I+ D V +D G K+ +P QF GE +G EVDV + +V++ Sbjct: 199 GDRLKGVVESINNDDVFIDLGAKAMGVPGIVPLRQF----GEKTPVIGQEVDVKVTSVKE 254 Query: 78 GFGETLLSREKAKRHEA--WITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSL 135 G LS + A W A + V V+N KGG V + +R FLP S Sbjct: 255 AEGLIQLSLPRGHHKPAGDW----DAVSAGQVVECVVNKSNKGGLEVNVGSLRGFLPASQ 310 Query: 136 VDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEV 195 VD+ V D G++L ++ +++ K+ N+VVSRR +ESE + +L E L G E Sbjct: 311 VDLYFVGDLEPFVGQKLTVQITEVNPKKRNLVVSRRKYLESEREEIQKELWEKLAIGQEH 370 Query: 196 KGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRV 255 G VKN+ DYGAFVDLGG+DG LHI +++W R+KHP + ++ +I VK+LK D+E+ R+ Sbjct: 371 TGTVKNIKDYGAFVDLGGIDGFLHIGEISWNRIKHPKDALSEHQQINVKILKIDKEKNRI 430 Query: 256 SLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTN-K 314 SLG+KQL +DPW + RY G+ ++G+VT TD+G F+E+E G+EGL+H+SE+D K Sbjct: 431 SLGMKQLQQDPWQSAEDRYATGSTISGKVTRTTDFGAFIELEPGLEGLIHISELDHRRVK 490 Query: 315 NIHPSKVVNVGDVVEVMVLDIDEERRRISLGLK 347 + ++V+ G VL++D R+RISL +K Sbjct: 491 RV--TEVLTTGQETSAKVLEVDPNRKRISLSIK 521 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 103/354 (29%), Positives = 178/354 (50%), Gaps = 44/354 (12%) Query: 187 ENLQEGMEVKGIVKNLTDYGAFVDLG----GVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 E + EG +KG+V+++ + F+DLG GV G++ + K +G E+ Sbjct: 194 EGVGEGDRLKGVVESINNDDVFIDLGAKAMGVPGIVPLRQFGEK-------TPVIGQEVD 246 Query: 243 VKVLKFDRERTRVSLGLKQLGEDP---WVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEG 299 VKV + L L + P W A++ ++ V N ++ G E+ G Sbjct: 247 VKVTSVKEAEGLIQLSLPRGHHKPAGDWDAVS-----AGQVVECVVNKSNKGGL-EVNVG 300 Query: 300 -VEGLVHVSEMD-WTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLK--------QC 349 + G + S++D + ++ P VG + V + +++ ++R + + + + Sbjct: 301 SLRGFLPASQVDLYFVGDLEPF----VGQKLTVQITEVNPKKRNLVVSRRKYLESEREEI 356 Query: 350 KANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWN--VAGEEAVR 407 + W++ A G G +K+I D+G F+ L GGIDG +H+ +ISWN ++A+ Sbjct: 357 QKELWEKLA----IGQEHTGTVKNIKDYGAFVDL-GGIDGFLHIGEISWNRIKHPKDALS 411 Query: 408 EYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGAT 467 E++ +I +L++D E+ RISLG+KQL +DP+ + G+ ++GKVT GA Sbjct: 412 EHQ---QINVKILKIDKEKNRISLGMKQLQQDPWQSAEDRYATGSTISGKVTRTTDFGAF 468 Query: 468 VELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRA 521 +EL G+EG + SE RV+ T VL+ G E AK VD + ISLS++A Sbjct: 469 IELEPGLEGLIHISELDHRRVKRVTEVLTTGQETSAKVLEVDPNRKRISLSIKA 522 Score = 81.3 bits (199), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 66/222 (29%), Positives = 117/222 (52%), Gaps = 14/222 (6%) Query: 58 GELEIQVGDEVDVALDAVEDGFGETLLSREK---AKRHEAWITLEKAYEDAETVTGVI-N 113 G+LE VG ++ V + V ++SR K ++R E L + + TG + N Sbjct: 317 GDLEPFVGQKLTVQITEVNPKKRNLVVSRRKYLESEREEIQKELWEKLAIGQEHTGTVKN 376 Query: 114 GKVKGGFTVELNGIRAFLPGSLVD---VRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSR 170 K G F V+L GI FL + ++ +D L E +++ K++K+D+++N + + Sbjct: 377 IKDYGAF-VDLGGIDGFLHIGEISWNRIKHPKDALS-EHQQINVKILKIDKEKNRISLGM 434 Query: 171 RAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVK 229 + + + + D+ G + G V TD+GAF++L G++GL+HI+++ +RVK Sbjct: 435 KQLQQDPWQSAEDRYAT----GSTISGKVTRTTDFGAFIELEPGLEGLIHISELDHRRVK 490 Query: 230 HPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIA 271 +E++ G E + KVL+ D R R+SL +K L + P A A Sbjct: 491 RVTEVLTTGQETSAKVLEVDPNRKRISLSIKALIDKPEAAEA 532 >UniRef50_D1C7V0 RNA binding S1 domain protein n=2 Tax=Chloroflexi RepID=D1C7V0_SPHTD Length = 459 Score = 241 bits (614), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 125/339 (36%), Positives = 207/339 (61%), Gaps = 12/339 (3%) Query: 21 GSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE--LEIQVGDEVDVALDAVEDG 78 G ++ G ++ +D+D +LVD G KSE IPA +F E + VGD V V + E+ Sbjct: 48 GDVIEGQIMHVDRDELLVDIGSKSEGIIPAREFSTLTDEERAALSVGDHVLVFVVQAENQ 107 Query: 79 FGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLV-- 136 G+ +LS ++A++ ++W L++ YE E + + KGG V L+G+R F+P S V Sbjct: 108 EGQAVLSIDRARQEKSWRRLQEIYEAGEIIEAEVTNYNKGGLLVNLDGVRGFVPASQVTE 167 Query: 137 -----DVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQE 191 D D L G +L K+I++++ RN +++S R I+ +++L+E L E Sbjct: 168 IRGGDDSSKQADMARLIGSKLSLKIIEINRHRNRLILSERQAIQERRDVMKERLIEELTE 227 Query: 192 GMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRE 251 G +G V ++TD+GAFVD+GG DGL+H+++++W RVKHPSE++ VG+E+ V VL + E Sbjct: 228 GETRRGRVTSITDFGAFVDIGGADGLVHLSELSWSRVKHPSEVLKVGEEVDVYVLGINAE 287 Query: 252 RTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDW 311 +++L +K+ +PW +A +Y G + G VT L ++G F IE+G+EGL+HVSE+ Sbjct: 288 EKKIALSIKRTQPEPWSRVAMKYEVGQLVLGTVTQLANFGAFARIEDGIEGLIHVSEL-- 345 Query: 312 TNKNI-HPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC 349 + + I HP +VV+ G + + ++ ID RRR+ L L++ Sbjct: 346 SEQRIGHPRQVVSEGQDLILRIIRIDPARRRMGLSLRRA 384 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 79/264 (29%), Positives = 145/264 (54%), Gaps = 12/264 (4%) Query: 184 QLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKR-----VKHPSEIVNVG 238 +L E + G ++ V N G V+L GV G + + + R K +G Sbjct: 126 RLQEIYEAGEIIEAEVTNYNKGGLLVNLDGVRGFVPASQVTEIRGGDDSSKQADMARLIG 185 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRY----PEGTKLTGRVTNLTDYGCFV 294 ++++K+++ +R R R+ L +Q ++ + +R EG GRVT++TD+G FV Sbjct: 186 SKLSLKIIEINRHRNRLILSERQAIQERRDVMKERLIEELTEGETRRGRVTSITDFGAFV 245 Query: 295 EIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPW 354 +I G +GLVH+SE+ W+ HPS+V+ VG+ V+V VL I+ E ++I+L +K+ + PW Sbjct: 246 DIG-GADGLVHLSELSWSRVK-HPSEVLKVGEEVDVYVLGINAEEKKIALSIKRTQPEPW 303 Query: 355 QQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDE 414 + A + G V G + + +FG F ++ GI+GL+H+S++S G + +G + Sbjct: 304 SRVAMKYEVGQLVLGTVTQLANFGAFARIEDGIEGLIHVSELSEQRIGHPR-QVVSEGQD 362 Query: 415 IAAVVLQVDAERERISLGVKQLAE 438 + ++++D R R+ L +++ E Sbjct: 363 LILRIIRIDPARRRMGLSLRRALE 386 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 86/312 (27%), Positives = 157/312 (50%), Gaps = 12/312 (3%) Query: 235 VNVGDEITVKVLKFDRERTRVSLGL-KQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCF 293 ++VGD + V V++ + + + L + + E W + + Y G + VTN G Sbjct: 91 LSVGDHVLVFVVQAENQEGQAVLSIDRARQEKSWRRLQEIYEAGEIIEAEVTNYNKGGLL 150 Query: 294 VEIEEGVEGLVHVSEMDWTNKNIHPSKVVN----VGDVVEVMVLDIDEERRRISLGLKQC 349 V ++ GV G V S++ SK + +G + + +++I+ R R+ L +Q Sbjct: 151 VNLD-GVRGFVPASQVTEIRGGDDSSKQADMARLIGSKLSLKIIEINRHRNRLILSERQA 209 Query: 350 ----KANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEA 405 + ++ E +G+ G++ SITDFG F+ + GG DGLVHLS++SW+ + Sbjct: 210 IQERRDVMKERLIEELTEGETRRGRVTSITDFGAFVDI-GGADGLVHLSELSWSRVKHPS 268 Query: 406 VREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKG 465 K G+E+ VL ++AE ++I+L +K+ +P++ + G +V G VT + G Sbjct: 269 -EVLKVGEEVDVYVLGINAEEKKIALSIKRTQPEPWSRVAMKYEVGQLVLGTVTQLANFG 327 Query: 466 ATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEA 525 A + DG+EG + SE S R+ V+S G ++ + +D R + LS+R EA Sbjct: 328 AFARIEDGIEGLIHVSELSEQRIGHPRQVVSEGQDLILRIIRIDPARRRMGLSLRRALEA 387 Query: 526 DEKDAIATVNKQ 537 + + A++ + Sbjct: 388 TDDEVAASLGPE 399 >UniRef50_D1AGH2 RNA binding S1 domain protein n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AGH2_SEBTE Length = 681 Score = 241 bits (614), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 155/524 (29%), Positives = 271/524 (51%), Gaps = 40/524 (7%) Query: 5 FAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQV 64 F L E L E E + G ++ G+++ +KD +D K E I + +N + V Sbjct: 4 FETLLNEYLPE-EKKKGELIEGIILRKEKDFSYLDVNDKLEGKIYTNEIEN------LNV 56 Query: 65 GDEVDVAL---DAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 G+ V+V + D + LL +EK +YE + + G I K+KGG+ Sbjct: 57 GEVVEVKIIRNDGENIIVSKFLLDKEKEFA---------SYETGDIIQGEIIEKIKGGYK 107 Query: 122 VELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 V+L FLP S+ ++R RD E K +FK + +D+ N+ +SR +++ E Sbjct: 108 VKLGKNIGFLPFSISNLR--RDD---EYKNKKFKFLIIDKDTKNLTLSRSDLVKKE---- 158 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEI 241 + + +Q+G ++G +K + D+G VDLG G +HI+++ W VK + N D+I Sbjct: 159 EEDFYQTVQKGDVLEGTIKEILDFGLIVDLGKTTGFIHISEVDWSSVKDLKHLFNANDKI 218 Query: 242 TVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVE 301 K+++ D+E ++ + +KQ+ EDPW +Y G L V+ + +G VE E Sbjct: 219 KAKIIELDKENKKIKMSIKQMKEDPWNIFIAKYKTGDVLEAEVSEVMPFGIVVEHEHN-R 277 Query: 302 GLVHVSEMDWTNKNIHP----SKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQF 357 G +H+SE+ W HP SK ++G ++ +++IDE+ R L +KQ NPW + Sbjct: 278 GFIHISEISW-----HPIEELSKCYSLGQKLKARIIEIDEKGRNYKLSVKQLDENPWDKL 332 Query: 358 AETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAA 417 E + GD VEG I+ I DF I +D + G +H+S+ISW A + ++K GD + A Sbjct: 333 VENYKVGDTVEGVIEKILDFAILPSVDDVL-GFIHISEISWG-AHTGVIEQFKLGDTVKA 390 Query: 418 VVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGY 477 +++++ + + L +K+L+ DP+ +KG I+ ++ + VE+ + VEG Sbjct: 391 KIIELNKDAKIFKLSIKRLSSDPWETVKDKYQKGQILEREIKEILDFALLVEMEENVEGM 450 Query: 478 LRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRA 521 + SE S RV + +VG++++ K + + R +SLS++A Sbjct: 451 VHISEISYRRVNNLKEKFTVGEKIKFKILEFNEEKRRVSLSMKA 494 Score = 187 bits (474), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 119/435 (27%), Positives = 224/435 (51%), Gaps = 16/435 (3%) Query: 88 KAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRD--TL 145 K + + W Y+ + + ++ + G VE R F+ S + P+ + Sbjct: 237 KQMKEDPWNIFIAKYKTGDVLEAEVSEVMPFGIVVEHEHNRGFIHISEISWHPIEELSKC 296 Query: 146 HLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDY 205 + G++L+ ++I++D+K N +S + + E+ D+L+EN + G V+G+++ + D+ Sbjct: 297 YSLGQKLKARIIEIDEKGRNYKLSVKQLDENP----WDKLVENYKVGDTVEGVIEKILDF 352 Query: 206 GAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGED 265 + V G +HI++++W E +GD + K+++ +++ L +K+L D Sbjct: 353 AILPSVDDVLGFIHISEISWGAHTGVIEQFKLGDTVKAKIIELNKDAKIFKLSIKRLSSD 412 Query: 266 PWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVG 325 PW + +Y +G L + + D+ VE+EE VEG+VH+SE+ + N K VG Sbjct: 413 PWETVKDKYQKGQILEREIKEILDFALLVEMEENVEGMVHISEISYRRVNNLKEK-FTVG 471 Query: 326 DVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDG 385 + ++ +L+ +EE+RR+SL +K + W + + V GK+ +I ++GIF L+ Sbjct: 472 EKIKFKILEFNEEKRRVSLSMKAILDDIWANIHDKYTLNQEVSGKVINIQEYGIFAELED 531 Query: 386 GIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWV 445 G++ +H +D SW +E +EYK GD + +L++D + ++IS G+KQL + P+ Sbjct: 532 GLEVFIHRNDFSWE---KEEHKEYKLGDIVNFRILKIDEKEKKISGGIKQLTQSPWKEME 588 Query: 446 ALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKF 505 ++ K G V V G V+L D + E E+ T L+VGD VE Sbjct: 589 SMYKIGNKVKVSVENEIENGYIVKLTDRFSALIPKKELP----ENTT--LAVGDTVEGII 642 Query: 506 TGVDRKNRAISLSVR 520 T + K +++ LSV+ Sbjct: 643 TEMHEKRKSVILSVK 657 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 50/233 (21%), Positives = 109/233 (46%), Gaps = 25/233 (10%) Query: 292 CFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKA 351 ++++ + +EG ++ +E++ +NVG+VVEV ++ D E +S L Sbjct: 34 SYLDVNDKLEGKIYTNEIE----------NLNVGEVVEVKIIRNDGENIIVSKFL----L 79 Query: 352 NPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKK 411 + ++FA ++ GD ++G+I G + L I G + S + E +++K Sbjct: 80 DKEKEFA-SYETGDIIQGEIIEKIKGGYKVKLGKNI-GFLPFSISNLRRDDEYKNKKFK- 136 Query: 412 GDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELA 471 L +D + + ++L L + ++ +KG ++ G + + G V+L Sbjct: 137 -------FLIIDKDTKNLTLSRSDLVKKEEEDFYQTVQKGDVLEGTIKEILDFGLIVDLG 189 Query: 472 DGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDE 524 G++ SE V+D + + D+++AK +D++N+ I +S++ E Sbjct: 190 KTT-GFIHISEVDWSSVKDLKHLFNANDKIKAKIIELDKENKKIKMSIKQMKE 241 >UniRef50_B0VFT2 Putative Ribosomal protein S1 n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VFT2_9BACT Length = 503 Score = 240 bits (613), Expect = 9e-62, Method: Compositional matrix adjust. Identities = 146/434 (33%), Positives = 243/434 (55%), Gaps = 16/434 (3%) Query: 1 MTESFAQLFEESLKEI-ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE 59 M E + ++ EES + E + G ++ +V+I + ++++ G K ++ +F +++G Sbjct: 17 MKEEYLRMLEESFQNTAEIKKGDVIEAPIVSIGEQYIILNLGGKFDAYAEIGEFSDSRGV 76 Query: 60 LEIQVGDEVD-VALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 L +VGD + +D E+G+ +++R K++ ++ +A+E V G I KG Sbjct: 77 LPYKVGDNLKGYVVDQNENGY---VVARSLTKQYVDKQSILEAFEKKIPVQGKIYTPTKG 133 Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 GF V++ G RAF P S V + PV D+ GK L+F VI+ + +VVS R + E Sbjct: 134 GFNVDILGARAFCPVSQVSLHPVEDSSQFIGKTLDFLVIECSENCRRIVVSHRQLEEMRE 193 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVG 238 ++ L L+ G VKG V +T +GAF+DLGG++GL+H+++++W+ + P + + G Sbjct: 194 QERKETALAKLKVGDIVKGKVLRMTTFGAFIDLGGIEGLMHVSEISWQHIVRPQDELKKG 253 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE 298 EI VK+L E +++L K L EDP+ K EG + RV L ++G F E++ Sbjct: 254 QEIEVKILDIKGE--KIALSRKVLLEDPFEVAMKELHEGDIINCRVLRLHNFGAFAELKP 311 Query: 299 GVEGLVHVSEMDWTNKNI-HPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQF 357 GVEGL+ +SEM N+NI HP +V GD V+V +L IDE+ +ISL LK +A+PW + Sbjct: 312 GVEGLIPISEMS-RNRNISHPRDIVKEGDWVQVQILRIDEDTHKISLSLKALEADPWDKI 370 Query: 358 AETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAA 417 E EG ++S T+FG+F+ + GI GL+ S + N ++ G+ + Sbjct: 371 DEIIQLETPFEGIVESSTNFGVFVTISEGITGLLPKSRVRKNDT-------FQTGEPVTL 423 Query: 418 VVLQVDAERERISL 431 +V +D E RI+L Sbjct: 424 MVTAIDKENHRITL 437 Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 93/273 (34%), Positives = 141/273 (51%), Gaps = 28/273 (10%) Query: 269 AIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVN--VGD 326 A K+ P + G++ T G V+I G VS++ ++HP + + +G Sbjct: 116 AFEKKIP----VQGKIYTPTKGGFNVDIL-GARAFCPVSQV-----SLHPVEDSSQFIGK 165 Query: 327 VVEVMVLDIDEERRRISLGLKQCKANPWQQFAETH----NKGDRVEGKIKSITDFGIFIG 382 ++ +V++ E RRI + +Q + Q+ ET GD V+GK+ +T FG FI Sbjct: 166 TLDFLVIECSENCRRIVVSHRQLEEMREQERKETALAKLKVGDIVKGKVLRMTTFGAFID 225 Query: 383 LDGGIDGLVHLSDISWNVAGEEAVR---EYKKGDEIAAVVLQVDAERERISLGVKQLAED 439 L GGI+GL+H+S+ISW + VR E KKG EI +L D + E+I+L K L ED Sbjct: 226 L-GGIEGLMHVSEISW----QHIVRPQDELKKGQEIEVKIL--DIKGEKIALSRKVLLED 278 Query: 440 PFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDR-VEDATLVLSVG 498 PF + +G I+ +V + GA EL GVEG + SE SR+R + ++ G Sbjct: 279 PFEVAMKELHEGDIINCRVLRLHNFGAFAELKPGVEGLIPISEMSRNRNISHPRDIVKEG 338 Query: 499 DEVEAKFTGVDRKNRAISLSVRAKDEADEKDAI 531 D V+ + +D ISLS++A EAD D I Sbjct: 339 DWVQVQILRIDEDTHKISLSLKAL-EADPWDKI 370 >UniRef50_D1Y3S9 30S ribosomal protein S1 n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y3S9_9BACT Length = 518 Score = 240 bits (612), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 137/427 (32%), Positives = 248/427 (58%), Gaps = 20/427 (4%) Query: 21 GSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQGELEIQVGDEVDVALDAVED 77 G ++ G VV LVD G K E +P ++ + + ++GD+++V + + D Sbjct: 33 GKVIEGTVVEKTDGGWLVDVGYKCEGFLPEREWTHHILVDDKPAPEIGDKIEVQVTSKRD 92 Query: 78 GF-GETLLSREKAKRHEAWITLEKAYE--DAETVTGVINGKVKGGFTVELNGIRAFLPGS 134 G + L+SR + + W LE + D TV G+ KVKGG V + F+P S Sbjct: 93 GEEAQLLVSRWRCEFDRRWAELESKVKANDIITVKGI--RKVKGGLMVNCFNLEGFIPIS 150 Query: 135 LV-----DVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENL 189 + V P R EG+E + +++++D+++ +V+SRR++++ + SA+R++ + Sbjct: 151 HLAEEGRGVNPGR----FEGEEFQVRLLEMDKRKRRLVLSRRSLLDEDLSAKREKFYSEV 206 Query: 190 QEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFD 249 G + G V ++T +G FV++G +DGL+H+++++W+R E GD + VKV+ D Sbjct: 207 NVGDVLDGTVSSVTTFGLFVNVGPLDGLVHVSEVSWQRSSKSRETYKKGDAVKVKVIGID 266 Query: 250 RERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEM 309 +E ++SL ++Q +PW + +R+ + + G VTN+TD+G FVE+E G+EGL+H+ ++ Sbjct: 267 KENNKISLSIRQAQGNPWDTVMERWQKDQQTKGVVTNVTDFGAFVEVEPGIEGLIHIGDL 326 Query: 310 DWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEG 369 W+ HP +V++ G VE +VL+ID E++R+SLG KQ +PW+ E + KG + Sbjct: 327 SWSRIK-HPREVLHKGQEVETIVLEIDPEKKRMSLGYKQLH-DPWKGIEERYTKGQDITV 384 Query: 370 KIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERI 429 K+ + DFG F+ ++ G++GL+H+S +S + E+ ++G E+ A VL+V+ RI Sbjct: 385 KVVRLADFGAFVEIEKGVEGLIHISQLSTHRV-EKPGDVLQEGQEVTARVLEVNPAERRI 443 Query: 430 SLGVKQL 436 L + + Sbjct: 444 RLSISAI 450 Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 147/440 (33%), Positives = 230/440 (52%), Gaps = 29/440 (6%) Query: 105 AETVTGVINGKVKGGFTVELN-GIRAFLPGS------LVDVRPVRDTLHLEGKELEFKVI 157 + + G + K GG+ V++ FLP LVD +P + G ++E +V Sbjct: 33 GKVIEGTVVEKTDGGWLVDVGYKCEGFLPEREWTHHILVDDKPAPEI----GDKIEVQVT 88 Query: 158 -KLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDG 216 K D + ++VSR AE + ++ + + VKGI K G V+ ++G Sbjct: 89 SKRDGEEAQLLVSRWRCEFDRRWAELESKVK-ANDIITVKGIRK--VKGGLMVNCFNLEG 145 Query: 217 LLHITDMAWK-RVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQL-GEDPWVAIAKRY 274 + I+ +A + R +P G+E V++L+ D+ + R+ L + L ED K Y Sbjct: 146 FIPISHLAEEGRGVNPGRFE--GEEFQVRLLEMDKRKRRLVLSRRSLLDEDLSAKREKFY 203 Query: 275 PE---GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVM 331 E G L G V+++T +G FV + ++GLVHVSE+ W ++ + GD V+V Sbjct: 204 SEVNVGDVLDGTVSSVTTFGLFVNVGP-LDGLVHVSEVSW-QRSSKSRETYKKGDAVKVK 261 Query: 332 VLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLV 391 V+ ID+E +ISL ++Q + NPW E K + +G + ++TDFG F+ ++ GI+GL+ Sbjct: 262 VIGIDKENNKISLSIRQAQGNPWDTVMERWQKDQQTKGVVTNVTDFGAFVEVEPGIEGLI 321 Query: 392 HLSDISWNVAGEEAVRE-YKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKK 450 H+ D+SW+ + RE KG E+ +VL++D E++R+SLG KQL DP+ K Sbjct: 322 HIGDLSWSRI--KHPREVLHKGQEVETIVLEIDPEKKRMSLGYKQL-HDPWKGIEERYTK 378 Query: 451 GAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDR 510 G +T KV + GA VE+ GVEG + S+ S RVE VL G EV A+ V+ Sbjct: 379 GQDITVKVVRLADFGAFVEIEKGVEGLIHISQLSTHRVEKPGDVLQEGQEVTARVLEVNP 438 Query: 511 KNRAISLSVRAKDEADEKDA 530 R I LS+ A EA EK A Sbjct: 439 AERRIRLSISAI-EAGEKAA 457 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 95/352 (26%), Positives = 170/352 (48%), Gaps = 20/352 (5%) Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVG 238 A+ D E + G ++G V TD G VD+G +G L + + +G Sbjct: 21 AQYDAASEEIARGKVIEGTVVEKTDGGWLVDVGYKCEGFLPEREWTHHILVDDKPAPEIG 80 Query: 239 DEITVKVL-KFDRERTRVSLGLKQLGEDP-WVAIAKRYPEGTKLTGRVTNLTDYG----C 292 D+I V+V K D E ++ + + D W + + +T + G C Sbjct: 81 DKIEVQVTSKRDGEEAQLLVSRWRCEFDRRWAELESKVKANDIITVKGIRKVKGGLMVNC 140 Query: 293 FVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLG----LKQ 348 F +EG + +S + + ++P + G+ +V +L++D+ +RR+ L L + Sbjct: 141 F-----NLEGFIPISHLAEEGRGVNPGRFE--GEEFQVRLLEMDKRKRRLVLSRRSLLDE 193 Query: 349 CKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVRE 408 + ++F N GD ++G + S+T FG+F+ + G +DGLVH+S++SW + + + Sbjct: 194 DLSAKREKFYSEVNVGDVLDGTVSSVTTFGLFVNV-GPLDGLVHVSEVSWQRSSK-SRET 251 Query: 409 YKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATV 468 YKKGD + V+ +D E +ISL ++Q +P++ + +K G VT V GA V Sbjct: 252 YKKGDAVKVKVIGIDKENNKISLSIRQAQGNPWDTVMERWQKDQQTKGVVTNVTDFGAFV 311 Query: 469 ELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 E+ G+EG + + S R++ VL G EVE +D + + +SL + Sbjct: 312 EVEPGIEGLIHIGDLSWSRIKHPREVLHKGQEVETIVLEIDPEKKRMSLGYK 363 >UniRef50_C7NE91 RNA binding S1 domain protein n=3 Tax=Leptotrichia RepID=C7NE91_LEPBD Length = 600 Score = 237 bits (605), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 169/540 (31%), Positives = 281/540 (52%), Gaps = 43/540 (7%) Query: 5 FAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQV 64 F L E+ L E E + G +V GV+ + D +D K E I A + ++ ++ Sbjct: 6 FEVLLEDYLPE-EKKSGDVVEGVITRKELDYGFLDLNAKKEGRIYAHEVQD------FEI 58 Query: 65 GDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDA-----ETVTGVINGKVKGG 119 GD+++V + +D ++S+ L+KA E A + VTG I+ K+KGG Sbjct: 59 GDKIEVKVLREDDD--NIIVSK---------FMLDKAKELASFNVDDIVTGEISRKIKGG 107 Query: 120 FTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 +TV++ AFLP SL +D G++ FK + ++ ++N+ +SR +I+ Sbjct: 108 YTVKIGKNEAFLPFSLARFEKDKD---YTGQK--FKFLIREKNKSNITISRSDLIK---- 158 Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGD 239 E ++ E++ G V G VK + D+G +DLG G +HI++++W++V + +E GD Sbjct: 159 LEEEKYFESVNIGDIVTGKVKEVFDFGIILDLGAASGFIHISEVSWEQVDNLTEKYKKGD 218 Query: 240 EITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEG 299 EI+ K+++ D E+ R+ L +KQL EDPW+ A+ + G + V ++ D+G + +G Sbjct: 219 EISAKIIEKDAEKNRLKLSIKQLSEDPWINFAENHNVGDVVEAVVKDVLDFGIVATV-DG 277 Query: 300 VEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAE 359 G VH+SE+ W N K GD ++ I+ E++ + L +KQ NPW E Sbjct: 278 NSGFVHISELAWHN-GAKELKNYKEGDKFSAKIIQIENEKKNVKLSVKQLSENPWNTVKE 336 Query: 360 THNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVV 419 ++ GD +E I + DFG+ I L+ IDGL+H+SD+S+ +YK GD I + Sbjct: 337 KYHIGDIIEKPITEVFDFGLLISLEKDIDGLLHVSDLSYKRES-NLTSKYKAGDLIKFKI 395 Query: 420 LQVDAERERISLGVKQLAEDPFNNWVALNKKGAI---VTGKVTAVDAKGATVELADGVEG 476 + + E+ RI+L K L +D W L + TGKV V G VEL G+E Sbjct: 396 VDFNDEKNRITLSAKALLDD---RWEVLEETYDFDNTFTGKVMNVQDYGIFVELEKGIEV 452 Query: 477 YLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNK 536 ++ +E S D+ E VGDEVE K VD+ ++ +S S++ +++ K+A K Sbjct: 453 FIHRNEFSWDKREHKK--YKVGDEVEFKVIIVDKLDKKLSGSIKQLEKSPWKEATEQCKK 510 Score = 192 bits (487), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 123/434 (28%), Positives = 237/434 (54%), Gaps = 28/434 (6%) Query: 99 EKAYEDAETVTGVINGKVK----GGFTVELNGIRAFLPGSLVDVRPVRDTL---HLEGKE 151 E+ Y ++ + ++ GKVK G ++L F+ S V V D L + +G E Sbjct: 161 EEKYFESVNIGDIVTGKVKEVFDFGIILDLGAASGFIHISEVSWEQV-DNLTEKYKKGDE 219 Query: 152 LEFKVIKLDQKRNNVVVSRRAVIESE--NSAERDQLLENLQEGMEVKGIVKNLTDYGAFV 209 + K+I+ D ++N + +S + + E N AE N G V+ +VK++ D+G Sbjct: 220 ISAKIIEKDAEKNRLKLSIKQLSEDPWINFAE------NHNVGDVVEAVVKDVLDFGIVA 273 Query: 210 DLGGVDGLLHITDMAW----KRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGED 265 + G G +HI+++AW K +K+ E GD+ + K+++ + E+ V L +KQL E+ Sbjct: 274 TVDGNSGFVHISELAWHNGAKELKNYKE----GDKFSAKIIQIENEKKNVKLSVKQLSEN 329 Query: 266 PWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVG 325 PW + ++Y G + +T + D+G + +E+ ++GL+HVS++ + ++ SK G Sbjct: 330 PWNTVKEKYHIGDIIEKPITEVFDFGLLISLEKDIDGLLHVSDLSYKRESNLTSK-YKAG 388 Query: 326 DVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDG 385 D+++ ++D ++E+ RI+L K + W+ ET++ + GK+ ++ D+GIF+ L+ Sbjct: 389 DLIKFKIVDFNDEKNRITLSAKALLDDRWEVLEETYDFDNTFTGKVMNVQDYGIFVELEK 448 Query: 386 GIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWV 445 GI+ +H ++ SW+ + ++YK GDE+ V+ VD +++S +KQL + P+ Sbjct: 449 GIEVFIHRNEFSWD---KREHKKYKVGDEVEFKVIIVDKLDKKLSGSIKQLEKSPWKEAT 505 Query: 446 ALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKF 505 KKG ++ ++ + V+L D G + E S + ++D + S+GD+V+A Sbjct: 506 EQCKKGNVINTEIVEIQENFVLVKLTDRFNGIVPKRELSEEFLKDISEKFSIGDKVQAVI 565 Query: 506 TGVDRKNRAISLSV 519 T ++ K ++I+LSV Sbjct: 566 TDINEKRKSIALSV 579 >UniRef50_A1QYS7 SSU ribosomal protein S1P n=23 Tax=Borrelia RepID=A1QYS7_BORT9 Length = 555 Score = 237 bits (604), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 167/557 (29%), Positives = 293/557 (52%), Gaps = 27/557 (4%) Query: 8 LFEESLKEIE-TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGD 66 L E LK +E GS V GVV+ + KD VLVD G KSE I ++F+ +GD Sbjct: 9 LQENYLKVLEKVELGSSVSGVVINVMKDYVLVDIGYKSEGFIKIDEFETIPS-----IGD 63 Query: 67 EVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN- 125 ++D + V G +LS K +++ + + + G I ++ G+ V++N Sbjct: 64 KLDAIVTKVGGELG-LVLSVAKLDSLNLQDKIDEYISNRKVLKGKILAELSSGYKVQINE 122 Query: 126 GIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRN-NVVVSRRAVIESENSAERDQ 184 + F+P L RD G +EF V++ D+ +++ RR + ++ + Sbjct: 123 NVIGFMPSYLSS--KFRDEKLKRGLVVEFYVVQADKTDGLRLILDRRTLERERELVKKKE 180 Query: 185 LLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEITV 243 L+ + EG V G+V+ +TDY A + + V G+LH ++A+ RV++ + + VGD++ + Sbjct: 181 LVSSYNEGDIVDGVVERITDYSAIIKVKNLVLGVLHKRNIAFNRVENIEDFIRVGDKLRL 240 Query: 244 KVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGL 303 K++K + ++ L LK L +PW ++ +Y + + G+V + +G VE++ + G Sbjct: 241 KIIKLNVNAVKMELSLKALKTNPWDSVEAKYKVESIVKGKVVKILPFGAVVELDSEISGF 300 Query: 304 VHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNK 363 +H+S W P ++V VG +VEV +L+ID+E ++ISLG+KQ NPW A+ Sbjct: 301 IHISNFSWVRVIKSPQELVKVGQIVEVKILEIDKENQKISLGIKQVNENPWNNLAQRCAV 360 Query: 364 GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISW--NVAGEEAVREYKKGDEIAAVVLQ 421 G V+G +K+IT G F+ ++ GID + DISW V EE +K G I+ V++ Sbjct: 361 GKVVQGVVKNITKTGAFVSIEEGIDAYISKFDISWIDEVNPEEY---FKLGSSISGKVIE 417 Query: 422 VDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLR-- 479 +DA+++ I LG+KQL E+P++++ KKG + ++ +KG V + + G++ Sbjct: 418 LDAKKQNIKLGIKQLEENPWDDFSKSYKKGDTLEVEIVEKKSKGVQVRVYGKIMGFISKI 477 Query: 480 ----ASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVN 535 E+S + E+ L++GD+++ T +D KN+ + LS RA E + I++ Sbjct: 478 QLGDTKESSLETFEN----LNIGDKLKVIITNIDFKNKLVLLSYRAYKEQKSSEEISSYL 533 Query: 536 KQEDANFSNNAMAEAFK 552 +ED S A K Sbjct: 534 FKEDDEESYKPFANLLK 550 >UniRef50_D1VSI0 4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VSI0_9FIRM Length = 725 Score = 237 bits (604), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 132/347 (38%), Positives = 216/347 (62%), Gaps = 8/347 (2%) Query: 5 FAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQF-KNAQGELE-- 61 + + S K I + G IV G V+ + + V+V+ G +S+ I E+ KN + Sbjct: 277 MMEAIDNSFKRI--KKGEIVTGEVLYVTDNEVMVNLGYRSDGIISKEELSKNTDAKPSDL 334 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 + GDE++V + ++DG G +LS + + + W +E++Y + E VT + +VKGG T Sbjct: 335 YKQGDEIEVFVLKMDDGDGNVVLSARRVEDMKVWDEIEESYNNHEIVTAKVINQVKGGLT 394 Query: 122 VELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 L+GI AF+P S V V+ RD G + + ++I D+++ +V+SR+ V+ E + Sbjct: 395 ASLDGISAFIPASHVTVKFQRDLSKFVGDDFQCEIIDFDKRKRRIVLSRKNVLMRELEEK 454 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEI 241 R Q+ E+L G ++G V+ LT++GAFVD+GG+DGL+HI++++W RVKHPSE+V+ GD++ Sbjct: 455 RSQIFESLHIGDVIEGTVQRLTNFGAFVDIGGIDGLVHISELSWNRVKHPSEVVSAGDKV 514 Query: 242 TVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVE 301 V+VL D E+ R++LGLKQ E PW G + G+V N+ D+G FV +EEGV+ Sbjct: 515 KVQVLSLDEEKDRIALGLKQTTEKPWDKFINAVKVGDVVKGKVVNILDFGAFVRLEEGVD 574 Query: 302 GLVHVSEMDWTNKNIH-PSKVVNVGDVVEVMVLDIDEERRRISLGLK 347 GL+HVS++ ++I P + +G VEV V++ID+E ++ISL +K Sbjct: 575 GLLHVSQI--CREHIEKPQDRLEIGQEVEVKVIEIDQENKKISLSIK 619 Score = 145 bits (367), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 108/306 (35%), Positives = 168/306 (54%), Gaps = 14/306 (4%) Query: 137 DVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVK 196 D +P L+ +G E+E V+K+D NVV+S R V E+ D++ E+ V Sbjct: 328 DAKP--SDLYKQGDEIEVFVLKMDDGDGNVVLSARRV---EDMKVWDEIEESYNNHEIVT 382 Query: 197 GIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVS 256 V N G L G+ + + + K + S+ V GD+ +++ FD+ + R+ Sbjct: 383 AKVINQVKGGLTASLDGISAFIPASHVTVKFQRDLSKFV--GDDFQCEIIDFDKRKRRIV 440 Query: 257 LGLKQLG----EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWT 312 L K + E+ I + G + G V LT++G FV+I G++GLVH+SE+ W Sbjct: 441 LSRKNVLMRELEEKRSQIFESLHIGDVIEGTVQRLTNFGAFVDIG-GIDGLVHISELSW- 498 Query: 313 NKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIK 372 N+ HPS+VV+ GD V+V VL +DEE+ RI+LGLKQ PW +F GD V+GK+ Sbjct: 499 NRVKHPSEVVSAGDKVKVQVLSLDEEKDRIALGLKQTTEKPWDKFINAVKVGDVVKGKVV 558 Query: 373 SITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLG 432 +I DFG F+ L+ G+DGL+H+S I E+ + G E+ V+++D E ++ISL Sbjct: 559 NILDFGAFVRLEEGVDGLLHVSQICREHI-EKPQDRLEIGQEVEVKVIEIDQENKKISLS 617 Query: 433 VKQLAE 438 +K L E Sbjct: 618 IKALLE 623 Score = 142 bits (358), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 117/354 (33%), Positives = 186/354 (52%), Gaps = 14/354 (3%) Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEI 241 D + +++G V G V +TD V+LG DG++ +++ PS++ GDEI Sbjct: 282 DNSFKRIKKGEIVTGEVLYVTDNEVMVNLGYRSDGIISKEELSKNTDAKPSDLYKQGDEI 341 Query: 242 TVKVLKFDRERTRVSLGLKQLGEDP--WVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEG 299 V VLK D V L +++ ED W I + Y +T +V N G ++ G Sbjct: 342 EVFVLKMDDGDGNVVLSARRV-EDMKVWDEIEESYNNHEIVTAKVINQVKGGLTASLD-G 399 Query: 300 VEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQ---- 355 + + S + + SK V GD + ++D D+ +RRI L K + Sbjct: 400 ISAFIPASHVTVKFQR-DLSKFV--GDDFQCEIIDFDKRKRRIVLSRKNVLMRELEEKRS 456 Query: 356 QFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEI 415 Q E+ + GD +EG ++ +T+FG F+ + GGIDGLVH+S++SWN + GD++ Sbjct: 457 QIFESLHIGDVIEGTVQRLTNFGAFVDI-GGIDGLVHISELSWNRVKHPS-EVVSAGDKV 514 Query: 416 AAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVE 475 VL +D E++RI+LG+KQ E P++ ++ K G +V GKV + GA V L +GV+ Sbjct: 515 KVQVLSLDEEKDRIALGLKQTTEKPWDKFINAVKVGDVVKGKVVNILDFGAFVRLEEGVD 574 Query: 476 GYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKD 529 G L S+ R+ +E L +G EVE K +D++N+ ISLS++A E E D Sbjct: 575 GLLHVSQICREHIEKPQDRLEIGQEVEVKVIEIDQENKKISLSIKALLEPIEDD 628 >UniRef50_A7G2Q4 Ribosomal protein S1 n=13 Tax=Clostridium RepID=A7G2Q4_CLOBH Length = 387 Score = 236 bits (602), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 131/353 (37%), Positives = 232/353 (65%), Gaps = 10/353 (2%) Query: 12 SLKEIETRPGSIVRGVVVAI-DKDVVLVDAGLKSESAIPA-EQFKNAQGELE--IQVGDE 67 S+K I G +++G V+++ DK+ VL + G S+ +P E N + L+ I D Sbjct: 17 SMKRI--HKGELLKGKVISVSDKEAVL-NIGYISDGILPKKEVVDNEEVNLKDIISKDDV 73 Query: 68 VDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGI 127 + V + V DG G LLS++KA+ EAW LEKA+++ E + + +KGG + GI Sbjct: 74 ISVCVLEVNDGEGNVLLSKKKAEIIEAWSKLEKAFKNEEILEIKVEEIIKGGAIGHIQGI 133 Query: 128 RAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLE 187 R F+P S +D + V+D +G+ ++ ++I+LD+++ +V+S R V E E + +++LL Sbjct: 134 RVFIPASQIDNKYVKDLNVFKGEMVKGRLIELDKQKRKIVLSSRVVKEEEEAKRKEELLN 193 Query: 188 NLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLK 247 +L++G +++G+V+ L +GAFVD+GG+DGL+H + ++W RV HPSE+V++GD++ V VL Sbjct: 194 SLEKGQKIEGVVRRLEKFGAFVDIGGMDGLVHNSQLSWGRVNHPSEVVSIGDKVEVYVLD 253 Query: 248 FDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVS 307 FD++ +++L LK + +DPW + +Y G+ + G + L ++G FVE+E G+EGLVH+S Sbjct: 254 FDKDTKKIALSLKDVKKDPWNTVKDKYAVGSVIEGTIVKLLNFGAFVEVENGIEGLVHIS 313 Query: 308 EMDWTNKNI-HPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAE 359 E+ T+++I PS+ +N+GD V+V VL+++ + +R+SL +K+ P + F++ Sbjct: 314 EI--TDEHIAKPSEKLNIGDKVKVKVLEVNSDEKRMSLSIKEATEKPKEDFSK 364 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 87/292 (29%), Positives = 167/292 (57%), Gaps = 18/292 (6%) Query: 156 VIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVD 215 V++++ NV++S++ E ++ ++ +N +E +E+K V+ + GA + G+ Sbjct: 78 VLEVNDGEGNVLLSKKKAEIIEAWSKLEKAFKN-EEILEIK--VEEIIKGGAIGHIQGIR 134 Query: 216 GLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVA----IA 271 + + + K VK + V G+ + ++++ D+++ ++ L + + E+ + Sbjct: 135 VFIPASQIDNKYVKDLN--VFKGEMVKGRLIELDKQKRKIVLSSRVVKEEEEAKRKEELL 192 Query: 272 KRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVM 331 +G K+ G V L +G FV+I G++GLVH S++ W N HPS+VV++GD VEV Sbjct: 193 NSLEKGQKIEGVVRRLEKFGAFVDIG-GMDGLVHNSQLSWGRVN-HPSEVVSIGDKVEVY 250 Query: 332 VLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLV 391 VLD D++ ++I+L LK K +PW + + G +EG I + +FG F+ ++ GI+GLV Sbjct: 251 VLDFDKDTKKIALSLKDVKKDPWNTVKDKYAVGSVIEGTIVKLLNFGAFVEVENGIEGLV 310 Query: 392 HLSDISWNVAGEEAVREYKK---GDEIAAVVLQVDAERERISLGVKQLAEDP 440 H+S+I+ E + +K GD++ VL+V+++ +R+SL +K+ E P Sbjct: 311 HISEIT----DEHIAKPSEKLNIGDKVKVKVLEVNSDEKRMSLSIKEATEKP 358 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 91/368 (24%), Positives = 192/368 (52%), Gaps = 17/368 (4%) Query: 168 VSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWK 226 ++ + ++E NS+ ++ + +G +KG V +++D A +++G + DG+L ++ Sbjct: 5 ITMKDMMEEINSS-----MKRIHKGELLKGKVISVSDKEAVLNIGYISDGILPKKEVVDN 59 Query: 227 RVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGE-DPWVAIAKRYPEGTKLTGRVT 285 + +I++ D I+V VL+ + V L K+ + W + K + L +V Sbjct: 60 EEVNLKDIISKDDVISVCVLEVNDGEGNVLLSKKKAEIIEAWSKLEKAFKNEEILEIKVE 119 Query: 286 NLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLG 345 + G I+ G+ + S++D NK + V G++V+ ++++D+++R+I L Sbjct: 120 EIIKGGAIGHIQ-GIRVFIPASQID--NKYVKDLNVFK-GEMVKGRLIELDKQKRKIVLS 175 Query: 346 LK----QCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVA 401 + + +A ++ + KG ++EG ++ + FG F+ + GG+DGLVH S +SW Sbjct: 176 SRVVKEEEEAKRKEELLNSLEKGQKIEGVVRRLEKFGAFVDI-GGMDGLVHNSQLSWGRV 234 Query: 402 GEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAV 461 + GD++ VL D + ++I+L +K + +DP+N G+++ G + + Sbjct: 235 NHPS-EVVSIGDKVEVYVLDFDKDTKKIALSLKDVKKDPWNTVKDKYAVGSVIEGTIVKL 293 Query: 462 DAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRA 521 GA VE+ +G+EG + SE + + + + L++GD+V+ K V+ + +SLS++ Sbjct: 294 LNFGAFVEVENGIEGLVHISEITDEHIAKPSEKLNIGDKVKVKVLEVNSDEKRMSLSIKE 353 Query: 522 KDEADEKD 529 E ++D Sbjct: 354 ATEKPKED 361 >UniRef50_B9L032 30S ribosomal protein S1 n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L032_THERP Length = 443 Score = 236 bits (601), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 123/341 (36%), Positives = 209/341 (61%), Gaps = 12/341 (3%) Query: 19 RPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL--EIQVGDEVDVALDAVE 76 R G +V G V+ +D++ +LVD G K E +P+ +F+ E ++ GD V V + E Sbjct: 43 RYGDVVEGEVMHVDREKILVDIGGKCEGVVPSREFQTLSPEELGRLRPGDRVLVFVLQPE 102 Query: 77 DGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLV 136 D G+ +LS ++A++ + W L++ +E + + KGG V L+GIR F+P S V Sbjct: 103 DQAGQAILSIDRARQEKTWRRLQEVFEAGGVIEAEVVNYNKGGLLVNLDGIRGFVPASQV 162 Query: 137 -------DVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENL 189 +V D + G+ L+ K+I++++ RN +++S R ++ + A + QL+E L Sbjct: 163 VAIRGGDEVSKQADMARMVGQRLKLKIIEINRHRNRLILSERQAVQEQRDAMKAQLIETL 222 Query: 190 QEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFD 249 +EG +G V ++ D+G FVD+GG DGL+H+++++W RVKHPSE++ VGDE+ V VL + Sbjct: 223 REGETRRGRVTSIADFGVFVDIGGADGLVHLSEISWTRVKHPSEVLRVGDEVDVMVLSVN 282 Query: 250 RERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEM 309 E+ +++L +++ +PW+ +A ++ G + G +T L +G F ++EGVEGL+HVSE+ Sbjct: 283 PEQRKIALSIRRTQPEPWMQVASQFQVGQVVRGTITQLASFGAFARLQEGVEGLIHVSEL 342 Query: 310 -DWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC 349 W + HP++V+ GD V V V+ ID RRRI L L++ Sbjct: 343 AGWRVE--HPNEVLQEGDDVIVRVIRIDPARRRIGLSLRRA 381 Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 90/279 (32%), Positives = 151/279 (54%), Gaps = 18/279 (6%) Query: 174 IESENSAERDQLLENLQEGMEVKGIVK----NLTDYGAFVDLGGVDGLLHITDMAWKR-- 227 I S + A +++ LQE E G+++ N G V+L G+ G + + + R Sbjct: 109 ILSIDRARQEKTWRRLQEVFEAGGVIEAEVVNYNKGGLLVNLDGIRGFVPASQVVAIRGG 168 Query: 228 ---VKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRY----PEGTKL 280 K VG + +K+++ +R R R+ L +Q ++ A+ + EG Sbjct: 169 DEVSKQADMARMVGQRLKLKIIEINRHRNRLILSERQAVQEQRDAMKAQLIETLREGETR 228 Query: 281 TGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERR 340 GRVT++ D+G FV+I G +GLVH+SE+ WT HPS+V+ VGD V+VMVL ++ E+R Sbjct: 229 RGRVTSIADFGVFVDIG-GADGLVHLSEISWTRVK-HPSEVLRVGDEVDVMVLSVNPEQR 286 Query: 341 RISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDIS-WN 399 +I+L +++ + PW Q A G V G I + FG F L G++GL+H+S+++ W Sbjct: 287 KIALSIRRTQPEPWMQVASQFQVGQVVRGTITQLASFGAFARLQEGVEGLIHVSELAGWR 346 Query: 400 VAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAE 438 V V ++GD++ V+++D R RI L +++ E Sbjct: 347 VEHPNEV--LQEGDDVIVRVIRIDPARRRIGLSLRRALE 383 Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 99/357 (27%), Positives = 179/357 (50%), Gaps = 22/357 (6%) Query: 195 VKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEI--VNVGDEITVKVLKFDRE 251 V+G V ++ VD+GG +G++ + + P E+ + GD + V VL+ + + Sbjct: 48 VEGEVMHVDREKILVDIGGKCEGVVPSREF---QTLSPEELGRLRPGDRVLVFVLQPEDQ 104 Query: 252 RTRVSLGL-KQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEM- 309 + L + + E W + + + G + V N G V ++ G+ G V S++ Sbjct: 105 AGQAILSIDRARQEKTWRRLQEVFEAGGVIEAEVVNYNKGGLLVNLD-GIRGFVPASQVV 163 Query: 310 -----DWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC----KANPWQQFAET 360 D +K +++V G +++ +++I+ R R+ L +Q + Q ET Sbjct: 164 AIRGGDEVSKQADMARMV--GQRLKLKIIEINRHRNRLILSERQAVQEQRDAMKAQLIET 221 Query: 361 HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL 420 +G+ G++ SI DFG+F+ + GG DGLVHLS+ISW + + GDE+ +VL Sbjct: 222 LREGETRRGRVTSIADFGVFVDI-GGADGLVHLSEISWTRVKHPS-EVLRVGDEVDVMVL 279 Query: 421 QVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRA 480 V+ E+ +I+L +++ +P+ + + G +V G +T + + GA L +GVEG + Sbjct: 280 SVNPEQRKIALSIRRTQPEPWMQVASQFQVGQVVRGTITQLASFGAFARLQEGVEGLIHV 339 Query: 481 SEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQ 537 SE + RVE VL GD+V + +D R I LS+R E +++ AT+ + Sbjct: 340 SELAGWRVEHPNEVLQEGDDVIVRVIRIDPARRRIGLSLRRALEISDEELEATLGPE 396 >UniRef50_A3DDC0 Hydroxymethylbutenyl pyrophosphate reductase n=7 Tax=Clostridiales RepID=A3DDC0_CLOTH Length = 694 Score = 235 bits (599), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 129/347 (37%), Positives = 212/347 (61%), Gaps = 6/347 (1%) Query: 5 FAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQF---KNAQGELE 61 FA FE S + G V+G ++ + + V VD G K++ IP E++ N E E Sbjct: 296 FANAFENSF--VRIHAGDTVKGKIIGFNSNEVFVDLGYKADGIIPLEEYTDDPNFNIEKE 353 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 +++G+EV+V ++ V DG G LS+ K ++W + KAYE+ V + VKGG Sbjct: 354 VKIGEEVEVLVEMVNDGEGNVRLSKRKVDAIKSWDDIVKAYENKTPVNAYVVEVVKGGVI 413 Query: 122 VELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 G+R F+P S V R V+D + + ++++L++KR VV S R +IE E A Sbjct: 414 ASYKGVRIFVPASQVSDRYVKDLNEFLKRSITVRILELNEKRRKVVGSARVIIEEEKEAL 473 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEI 241 ++ +++ G KG VK+LTD+GAFVD+GGVDGL+HI++++W RVKHPSE++ VGDE+ Sbjct: 474 ANRTWNSMEVGKVFKGTVKSLTDFGAFVDIGGVDGLIHISELSWTRVKHPSEVLKVGDEV 533 Query: 242 TVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVE 301 V VL+FD+E+ +VSLG +++ ++PW I ++Y G + V +G FVE+E+GV+ Sbjct: 534 EVTVLEFDKEKKKVSLGYRKMEDNPWYKIEEKYKVGDVVKVTVLRFAPFGAFVELEKGVD 593 Query: 302 GLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQ 348 GLVH+S++ + + + +G V+ ++++D E ++ISL +K+ Sbjct: 594 GLVHISQIS-SKRLAKVEDALEIGMKVDAKIIEVDGENKKISLSIKE 639 Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 94/282 (33%), Positives = 156/282 (55%), Gaps = 15/282 (5%) Query: 165 NVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMA 224 NV +S+R V + D +++ + V V + G GV + + ++ Sbjct: 373 NVRLSKRKV---DAIKSWDDIVKAYENKTPVNAYVVEVVKGGVIASYKGVRIFVPASQVS 429 Query: 225 WKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKR----YPEGTKL 280 + VK +E + ITV++L+ + +R +V + + E+ A+A R G Sbjct: 430 DRYVKDLNEFLK--RSITVRILELNEKRRKVVGSARVIIEEEKEALANRTWNSMEVGKVF 487 Query: 281 TGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERR 340 G V +LTD+G FV+I GV+GL+H+SE+ WT HPS+V+ VGD VEV VL+ D+E++ Sbjct: 488 KGTVKSLTDFGAFVDIG-GVDGLIHISELSWTRVK-HPSEVLKVGDEVEVTVLEFDKEKK 545 Query: 341 RISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWN- 399 ++SLG ++ + NPW + E + GD V+ + FG F+ L+ G+DGLVH+S IS Sbjct: 546 KVSLGYRKMEDNPWYKIEEKYKVGDVVKVTVLRFAPFGAFVELEKGVDGLVHISQISSKR 605 Query: 400 VAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAE-DP 440 +A E E G ++ A +++VD E ++ISL +K++ DP Sbjct: 606 LAKVEDALEI--GMKVDAKIIEVDGENKKISLSIKEVMPIDP 645 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 66/200 (33%), Positives = 110/200 (55%), Gaps = 12/200 (6%) Query: 328 VEVMVLDIDEERRRISLGL-------KQCKANPWQQFAETHNKGDRVEGKIKSITDFGIF 380 + V +L+++E+RR++ K+ AN E G +G +KS+TDFG F Sbjct: 444 ITVRILELNEKRRKVVGSARVIIEEEKEALANRTWNSMEV---GKVFKGTVKSLTDFGAF 500 Query: 381 IGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDP 440 + + GG+DGL+H+S++SW + K GDE+ VL+ D E++++SLG +++ ++P Sbjct: 501 VDI-GGVDGLIHISELSWTRVKHPS-EVLKVGDEVEVTVLEFDKEKKKVSLGYRKMEDNP 558 Query: 441 FNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDE 500 + K G +V V GA VEL GV+G + S+ S R+ L +G + Sbjct: 559 WYKIEEKYKVGDVVKVTVLRFAPFGAFVELEKGVDGLVHISQISSKRLAKVEDALEIGMK 618 Query: 501 VEAKFTGVDRKNRAISLSVR 520 V+AK VD +N+ ISLS++ Sbjct: 619 VDAKIIEVDGENKKISLSIK 638 >UniRef50_A6TRF8 RNA binding S1 domain protein n=2 Tax=Alkaliphilus RepID=A6TRF8_ALKMQ Length = 383 Score = 234 bits (598), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 130/350 (37%), Positives = 208/350 (59%), Gaps = 5/350 (1%) Query: 1 MTESFAQLFEESLKE-IETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE 59 M+ +L EE K I + G +V G V+ + + V+ G K++ +P ++ N Sbjct: 1 MSHDMEELMEEIEKSLIRPKRGEVVTGKVIQVSDKGITVNIGYKADGIVPRDEISNDPTI 60 Query: 60 LEIQVG---DEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKV 116 V DE+ V + +DG G LLS ++ + + W LEK ++ V + V Sbjct: 61 TPQDVAKADDEISVYIIKTDDGEGNVLLSTKRVEHTKGWEDLEKIHDTESLVESKVVESV 120 Query: 117 KGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIES 176 KGG GIR F+P S + R V D GK KVI++D+++N V+SR+ V++ Sbjct: 121 KGGVIAIARGIRCFIPASQLSDRYVDDLKTFVGKSFNAKVIEIDRQKNKAVLSRKEVLQQ 180 Query: 177 ENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVN 236 EN ++ + L++GM+++G VK LT++GAFVD+GG+DGL+HI++++W RVK+PSE+V+ Sbjct: 181 ENKEKKADVFAKLEKGMQIRGEVKRLTNFGAFVDIGGIDGLVHISELSWGRVKNPSEVVS 240 Query: 237 VGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI 296 V D++ VKV+ FD +VSL +KQ +PW IA ++ G L G+V L D+G FVE+ Sbjct: 241 VEDQVEVKVIDFDETTGKVSLSIKQTQPEPWTLIADKFKAGDILEGKVVRLVDFGAFVEL 300 Query: 297 EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGL 346 G++GLVH+S++ + PS+ ++VG V V VLDI+ + +RISL + Sbjct: 301 MPGLDGLVHISQISEAHI-AKPSEELHVGQNVNVKVLDINIDGKRISLSM 349 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 76/211 (36%), Positives = 120/211 (56%), Gaps = 7/211 (3%) Query: 237 VGDEITVKVLKFDRERTRVSLG----LKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGC 292 VG KV++ DR++ + L L+Q ++ + + +G ++ G V LT++G Sbjct: 152 VGKSFNAKVIEIDRQKNKAVLSRKEVLQQENKEKKADVFAKLEKGMQIRGEVKRLTNFGA 211 Query: 293 FVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN 352 FV+I G++GLVH+SE+ W + +PS+VV+V D VEV V+D DE ++SL +KQ + Sbjct: 212 FVDIG-GIDGLVHISELSW-GRVKNPSEVVSVEDQVEVKVIDFDETTGKVSLSIKQTQPE 269 Query: 353 PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKG 412 PW A+ GD +EGK+ + DFG F+ L G+DGLVH+S IS + + E G Sbjct: 270 PWTLIADKFKAGDILEGKVVRLVDFGAFVELMPGLDGLVHISQISEAHIAKPS-EELHVG 328 Query: 413 DEIAAVVLQVDAERERISLGVKQLAEDPFNN 443 + VL ++ + +RISL + ED N Sbjct: 329 QNVNVKVLDINIDGKRISLSMTAAQEDSTEN 359 Score = 98.2 bits (243), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 101/380 (26%), Positives = 179/380 (47%), Gaps = 24/380 (6%) Query: 179 SAERDQLLENLQE-------GMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKH 230 S + ++L+E +++ G V G V ++D G V++G DG++ +++ Sbjct: 2 SHDMEELMEEIEKSLIRPKRGEVVTGKVIQVSDKGITVNIGYKADGIVPRDEISNDPTIT 61 Query: 231 PSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDP-WVAIAKRYPEGTKLTGRVTNLTD 289 P ++ DEI+V ++K D V L K++ W + K + + + +V Sbjct: 62 PQDVAKADDEISVYIIKTDDGEGNVLLSTKRVEHTKGWEDLEKIHDTESLVESKVVESV- 120 Query: 290 YGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC 349 G + I G+ + S++ +++ + K VG V++ID ++ + L K+ Sbjct: 121 KGGVIAIARGIRCFIPASQL--SDRYVDDLKTF-VGKSFNAKVIEIDRQKNKAVLSRKEV 177 Query: 350 -----KANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISW-NVAGE 403 K FA+ KG ++ G++K +T+FG F+ + GGIDGLVH+S++SW V Sbjct: 178 LQQENKEKKADVFAKLE-KGMQIRGEVKRLTNFGAFVDI-GGIDGLVHISELSWGRVKNP 235 Query: 404 EAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDA 463 V + D++ V+ D ++SL +KQ +P+ K G I+ GKV + Sbjct: 236 SEVVSVE--DQVEVKVIDFDETTGKVSLSIKQTQPEPWTLIADKFKAGDILEGKVVRLVD 293 Query: 464 KGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKD 523 GA VEL G++G + S+ S + + L VG V K ++ + ISLS+ A Sbjct: 294 FGAFVELMPGLDGLVHISQISEAHIAKPSEELHVGQNVNVKVLDINIDGKRISLSMTAAQ 353 Query: 524 EADEKDAIATVNKQEDANFS 543 E D + T ED N + Sbjct: 354 E-DSTENEPTEYTDEDNNVT 372 >UniRef50_C6PXA3 RNA binding S1 domain protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PXA3_9CLOT Length = 388 Score = 234 bits (596), Expect = 8e-60, Method: Compositional matrix adjust. Identities = 131/352 (37%), Positives = 217/352 (61%), Gaps = 6/352 (1%) Query: 5 FAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIP-AEQFKNAQGELE-- 61 F + E S+K I R G +V+G ++++ ++ +V+ G S+ + +E +N + L Sbjct: 14 FMEDIESSMKSI--RRGEVVKGKIISVTENHAIVNIGYMSDGILSKSEVVENEEDNLSDI 71 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 ++ +E+ V + + DG G LLS++ A + +AW L+KA+E+ V + VKGG Sbjct: 72 LKENEEIYVYVLDMNDGEGNVLLSKKAADKIKAWDELKKAFEEKSDVETTVKEVVKGGVV 131 Query: 122 VELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 +NGIRAF+P S + + V D GK L KVI+ D+ + VV+SR+ + ++E + Sbjct: 132 TYINGIRAFIPASQLSLSYVEDLKSFIGKTLTVKVIEFDKDKEKVVLSRKVIEKAEAEEK 191 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEI 241 + LL +++ G + G+V L +GAFVDLGGVDGL+H+++++WKRV +P+++V+VGD++ Sbjct: 192 KQHLLNSIKPGEKRSGVVSRLAKFGAFVDLGGVDGLIHVSELSWKRVNNPADVVSVGDKV 251 Query: 242 TVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVE 301 V +L D+E +++L LK + E+PW ++ ++ G + G V L +G FVEI+ GVE Sbjct: 252 EVYILSVDKENNKIALALKDVNENPWESVGNKFKIGDVVEGEVLKLASFGAFVEIQPGVE 311 Query: 302 GLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP 353 GLVH+SE+ + PS V+N+GD V V +LDID + RISL +K P Sbjct: 312 GLVHISEIS-EERIAKPSDVLNLGDKVRVKILDIDNKENRISLSIKDAVEKP 362 Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 93/298 (31%), Positives = 161/298 (54%), Gaps = 14/298 (4%) Query: 148 EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGA 207 E +E+ V+ ++ NV++S++A ++ D+L + +E +V+ VK + G Sbjct: 74 ENEEIYVYVLDMNDGEGNVLLSKKA---ADKIKAWDELKKAFEEKSDVETTVKEVVKGGV 130 Query: 208 FVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQL----G 263 + G+ + + ++ V+ + G +TVKV++FD+++ +V L K + Sbjct: 131 VTYINGIRAFIPASQLSLSYVEDLKSFI--GKTLTVKVIEFDKDKEKVVLSRKVIEKAEA 188 Query: 264 EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVN 323 E+ + G K +G V+ L +G FV++ GV+GL+HVSE+ W N +P+ VV+ Sbjct: 189 EEKKQHLLNSIKPGEKRSGVVSRLAKFGAFVDLG-GVDGLIHVSELSWKRVN-NPADVVS 246 Query: 324 VGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGL 383 VGD VEV +L +D+E +I+L LK NPW+ GD VEG++ + FG F+ + Sbjct: 247 VGDKVEVYILSVDKENNKIALALKDVNENPWESVGNKFKIGDVVEGEVLKLASFGAFVEI 306 Query: 384 DGGIDGLVHLSDIS-WNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDP 440 G++GLVH+S+IS +A V GD++ +L +D + RISL +K E P Sbjct: 307 QPGVEGLVHISEISEERIAKPSDVLNL--GDKVRVKILDIDNKENRISLSIKDAVEKP 362 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 101/373 (27%), Positives = 184/373 (49%), Gaps = 13/373 (3%) Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 +++++ G VKG + ++T+ A V++G + DG+L +++ + S+I+ +EI V Sbjct: 22 MKSIRRGEVVKGKIISVTENHAIVNIGYMSDGILSKSEVVENEEDNLSDILKENEEIYVY 81 Query: 245 VLKFDRERTRVSLGLKQLGE-DPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGL 303 VL + V L K + W + K + E + + V + G I G+ Sbjct: 82 VLDMNDGEGNVLLSKKAADKIKAWDELKKAFEEKSDVETTVKEVVKGGVVTYIN-GIRAF 140 Query: 304 VHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKA----NPWQQFAE 359 + S++ + S +G + V V++ D+++ ++ L K + Q Sbjct: 141 IPASQLSLSYVEDLKS---FIGKTLTVKVIEFDKDKEKVVLSRKVIEKAEAEEKKQHLLN 197 Query: 360 THNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVV 419 + G++ G + + FG F+ L GG+DGL+H+S++SW A GD++ + Sbjct: 198 SIKPGEKRSGVVSRLAKFGAFVDL-GGVDGLIHVSELSWKRVNNPA-DVVSVGDKVEVYI 255 Query: 420 LQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLR 479 L VD E +I+L +K + E+P+ + K G +V G+V + + GA VE+ GVEG + Sbjct: 256 LSVDKENNKIALALKDVNENPWESVGNKFKIGDVVEGEVLKLASFGAFVEIQPGVEGLVH 315 Query: 480 ASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQED 539 SE S +R+ + VL++GD+V K +D K ISLS++ E ++D + N E Sbjct: 316 ISEISEERIAKPSDVLNLGDKVRVKILDIDNKENRISLSIKDAVEKPKED-LDKFNDNES 374 Query: 540 ANFSNNAMAEAFK 552 A S + + FK Sbjct: 375 AGTSLADLLKDFK 387 >UniRef50_B7IE33 4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Thermosipho africanus TCF52B RepID=B7IE33_THEAB Length = 811 Score = 231 bits (590), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 153/537 (28%), Positives = 292/537 (54%), Gaps = 36/537 (6%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL 60 M +F +L + L + R G IV VV+ + + VD G KSE + +++ + Sbjct: 270 MENNFEKLLDSYLFD-NVRKGEIVEAVVLRKGESEIFVDFGWKSEGVVTSDEL--VKDVK 326 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 + ++G+++ + L D G LS + + L++ +E E + G +N ++KGG+ Sbjct: 327 DYKIGEKLSLILLRKNDDEGIAYLSEKIVYSKKLKEILKEKFEKGEKIIGKVNSEIKGGY 386 Query: 121 TVEL-NGIRAFLPGSLVDVRPVRDTLHLEGK----ELEFKVIKLDQ--KRNNVVVSRRAV 173 V + N I+AFLP S +++ +G LEFK+IK ++ KR N+++SR+A Sbjct: 387 KVLIENTIQAFLPKS--------ESMIFDGNIPKSPLEFKIIKFEERGKRLNIILSRKAF 438 Query: 174 IESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPS 232 I + ++++ +EG ++GIVK + +GAFV + G+DGLL +++++ Sbjct: 439 I----NEQKEKFFNERKEGDIIEGIVKKIEKFGAFVRIFEGIDGLLPNSEVSYDTSLKVE 494 Query: 233 EIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGC 292 ++++ G + + + K D+E ++ L LK+L DPW + K+Y G ++G+V N+ YG Sbjct: 495 DVLSEGQSVKLYIKKIDKENRKILLSLKELMPDPWQNVTKKYKVGDIVSGKVKNILSYGF 554 Query: 293 FVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN 352 +V +E GV+GLVH+ ++ W + S +V+VGD+V+VM+ +ID +++ L K+ + + Sbjct: 555 YVNLEPGVDGLVHIDDIFWGRRG-KISDIVSVGDIVKVMIKEIDPNNKKMRLSYKEVEGD 613 Query: 353 PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVRE-YKK 411 PW+ E + G+ + G + I D G+ + ++ GI G +S+ISWN +V++ + Sbjct: 614 PWENIEEKYPVGNTITGTVSFILDKGVIVEIERGISGFCPISEISWNYIS--SVKDVLNE 671 Query: 412 GDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELA 471 G ++ AV+ ++D E ++ L +K++ E+P+ + +K G IV KV + K V Sbjct: 672 GQKVKAVITELDKENRKMRLSIKRVQENPWKKFKDNHKIGDIVAVKVIK-ELKSGYVGAC 730 Query: 472 DGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEK 528 + VE YL S ++ +++GDE++ K + + ++ K+ +EK Sbjct: 731 ENVEIYLPKSHVLKE--------ITLGDELKVKIIQIKEDGEILRITASEKELENEK 779 >UniRef50_Q8RI52 4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=19 Tax=Fusobacterium RepID=ISPH_FUSNN Length = 827 Score = 231 bits (589), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 153/521 (29%), Positives = 277/521 (53%), Gaps = 24/521 (4%) Query: 5 FAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVD-AGLKSESAIPAEQFKNAQGELEIQ 63 F+ + EE L E R V GV+ ++D++ +D G ++ + ++ K+ + Sbjct: 297 FSLMLEEFLPNQEKR----VEGVIESMDQNFSYLDVPGERTAVRVRTDELKDYK------ 346 Query: 64 VGDEVDVALDAV--EDGFGETLL-SREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 VGD V+V + + ED E + SR K + + W +E ++++ + + K+KGG+ Sbjct: 347 VGDTVEVLITGLSEEDDDQEYITASRRKIEVEKNWEKIEDSFKNKTILDAKVTKKIKGGY 406 Query: 121 TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLD---QKRNNVVVSRRAVIESE 177 VE FLP SL ++ + ++ + ++ K IK+D +K + S + + Sbjct: 407 LVEAFLYPGFLPNSLSEISDSEEKVNGKKIQVIVKDIKMDPKDKKNRKITYSVKDI---- 462 Query: 178 NSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNV 237 AE+++ L G V +V + D+G VD+ + G +HI++++WKR+ S+ V Sbjct: 463 RLAEQEKEFAGLAVGQIVDCVVTEVLDFGLAVDINTLKGFIHISEVSWKRLDKLSDNYKV 522 Query: 238 GDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE 297 GD+I V+ D + V L +K+L EDPW +A + ++ G VT + YG FVEI+ Sbjct: 523 GDKIKAVVVSLDEAKRNVKLSIKKLEEDPWATVANEFKVDDEIEGIVTKVLPYGAFVEIK 582 Query: 298 EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQF 357 GVEGLVH+S+ WT K ++ + V + ++V + D+ E R++ LG+KQ ANPW+ Sbjct: 583 PGVEGLVHISDFSWTKKKVNVADYVKEREKIKVRITDLHPEDRKLKLGIKQLVANPWETA 642 Query: 358 AETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAA 417 + ++GK+ + FGIF+ + GID VH SD +W GEE + +++ G+E+ Sbjct: 643 EKDFAIDTVIKGKVVEVKPFGIFVEIADGIDAFVHSSDYNW--VGEE-IPKFEIGNEVEL 699 Query: 418 VVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGY 477 + ++D ++I +K L + P+ + + K G V K+ V G +EL G++G+ Sbjct: 700 KITELDLNNKKIKGSLKALRKSPWEHAMEEYKVGTTVEKKIKTVADFGLFIELIKGIDGF 759 Query: 478 LRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLS 518 + AS++ +++ S GD V+A+ V+++ + I LS Sbjct: 760 IPTQFASKEFIKNIRDKFSEGDVVKAQVVEVNKETQKIKLS 800 >UniRef50_B5Y9T3 Ribosomal protein S1 n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y9T3_COPPD Length = 559 Score = 230 bits (587), Expect = 9e-59, Method: Compositional matrix adjust. Identities = 160/525 (30%), Positives = 278/525 (52%), Gaps = 15/525 (2%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN--AQGEL 60 E+F Q F+ + E G +V G V+ D D + +D K ++ +P ++ + A+ Sbjct: 6 ENFNQEFDVEMAE----RGDLVEGTVLRADVDGLWLDIASKYDAFLPLDECTSELARQVQ 61 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 E V V+V + D G +S+++A + W +E+ + E+ G G Sbjct: 62 EGNVPTSVEVVVTRTNDDKGYISVSQKRAAYRKLWKDVEEWEKSGESRKVKAVGADDKGV 121 Query: 121 TVELN-GIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 V+L GI ++P S +++R VRDT G+ L K++++++KRN +++++R V+E E Sbjct: 122 FVDLGAGILGYVPASQLEIRFVRDTKKYVGRSLRVKILRVNRKRNQIILTQRQVLEEEQK 181 Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVG 238 ++ L++ V+G V +TD G FVDLG G++G + ++ W+ +K+ +++ G Sbjct: 182 ERAEKAWLRLKDSDIVRGHVSRITDEGIFVDLGDGIEGFVPKDELDWRPIKNIAKVFRRG 241 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE 298 D + KVL D E+ + L ++ +PW A+++ G ++GRV G + ++ Sbjct: 242 DVVRAKVLSVDEEKKEMVLSIRLATPNPWQLFAEKHNVGDVVSGRVLRYLRGGLLLLVDR 301 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFA 358 V GLV E+ W + + +GD V+ +L D E + + L +K+ +PW+ Sbjct: 302 -VTGLVPAQEVSW-KRGAKVEDLYKIGDHVKAKILRFDPEAQDLILSVKEALGDPWENVE 359 Query: 359 ETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGE--EAVREYKKGDEIA 416 G + EG + +ITDFG+F+ L GI+GLV +SW + E V GD++ Sbjct: 360 RDFPVGSKAEGTVVNITDFGVFVELAPGIEGLVPRRYVSWKRFKDINEVV---NIGDQVE 416 Query: 417 AVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEG 476 VVL ++ +I+L ++ DP+ V + G +V GKV + +G VE+ADGVEG Sbjct: 417 VVVLGINIVDRKITLSMRDTRPDPWEEVVKNIQPGQLVRGKVVTIIPQGVFVEIADGVEG 476 Query: 477 YLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRA 521 ++ S+ S RV+D +S GDE+ AK G+D + R ISLSV+A Sbjct: 477 FIHISQLSIRRVDDPRDAVSEGDEIVAKVIGIDEERRRISLSVKA 521 Score = 158 bits (400), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 129/444 (29%), Positives = 221/444 (49%), Gaps = 43/444 (9%) Query: 29 VAIDKDVVLVDAGLKSESAIPAEQFK-NAQGELEIQVGDEVDVALDAVEDGFGETLLSR- 86 V D V VD G +PA Q + + + VG + V + V + +L++ Sbjct: 114 VGADDKGVFVDLGAGILGYVPASQLEIRFVRDTKKYVGRSLRVKILRVNRKRNQIILTQR 173 Query: 87 ------EKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL-NGIRAFLPGSLVDVR 139 +K + +AW+ L+ D++ V G ++ G V+L +GI F+P +D R Sbjct: 174 QVLEEEQKERAEKAWLRLK----DSDIVRGHVSRITDEGIFVDLGDGIEGFVPKDELDWR 229 Query: 140 PVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKG 197 P+++ + G + KV+ +D+++ +V+S R + + N + E G V G Sbjct: 230 PIKNIAKVFRRGDVVRAKVLSVDEEKKEMVLSIR--LATPNPWQ--LFAEKHNVGDVVSG 285 Query: 198 IVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSL 257 V G + + V GL+ +++WKR ++ +GD + K+L+FD E + L Sbjct: 286 RVLRYLRGGLLLLVDRVTGLVPAQEVSWKRGAKVEDLYKIGDHVKAKILRFDPEAQDLIL 345 Query: 258 GLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTN-KNI 316 +K+ DPW + + +P G+K G V N+TD+G FVE+ G+EGLV + W K+I Sbjct: 346 SVKEALGDPWENVERDFPVGSKAEGTVVNITDFGVFVELAPGIEGLVPRRYVSWKRFKDI 405 Query: 317 HPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITD 376 + +VVN+GD VEV+VL I+ R+I+L ++ + +PW++ + G V GK+ +I Sbjct: 406 N--EVVNIGDQVEVVVLGINIVDRKITLSMRDTRPDPWEEVVKNIQPGQLVRGKVVTIIP 463 Query: 377 FGIFIGLDGGIDGLVHLSDISWNVAGE--EAVREYKKGDEIAAVVL-------------- 420 G+F+ + G++G +H+S +S + +AV E GDEI A V+ Sbjct: 464 QGVFVEIADGVEGFIHISQLSIRRVDDPRDAVSE---GDEIVAKVIGIDEERRRISLSVK 520 Query: 421 --QVDAERERISLGVKQLAEDPFN 442 VD ERE + + Q ED F Sbjct: 521 AIHVDKEREELQDFLSQQGEDKFT 544 >UniRef50_A8Z6B9 Putative ribosomal protein S1 n=1 Tax=Candidatus Sulcia muelleri GWSS RepID=A8Z6B9_SULMW Length = 614 Score = 230 bits (587), Expect = 9e-59, Method: Compositional matrix adjust. Identities = 141/371 (38%), Positives = 230/371 (61%), Gaps = 13/371 (3%) Query: 12 SLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVA 71 S+ E G I++ ID++VV +D G K+E I +F+ EL +V D ++V Sbjct: 66 SIHEFYIYNGKIIK----IIDRNVV-IDFGFKAEGVISLNEFRY---ELP-KVNDIIEVI 116 Query: 72 LDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFL 131 ++ + D G ++S KAK+ ++W +++ + E + + + KGG V L GI FL Sbjct: 117 VEKL-DYKGRCIISYNKAKKLKSWEIIQEKFIKNEIIIFFVAARTKGGLIVVLFGIECFL 175 Query: 132 PGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQE 191 PGS + ++PV+D GK +E K++K++ K+ NVVVS + +IE ++ +L+ L++ Sbjct: 176 PGSQIYIKPVKDFDFYVGKTMEGKIVKINNKKKNVVVSHKILIEKYIEKKKRKLISKLEK 235 Query: 192 GMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDR 250 G ++GIVKN+T YG+F+D+GG +DGL HITD++W+R++HPSE + +G I +L D+ Sbjct: 236 GQVLRGIVKNITHYGSFIDIGGGIDGLCHITDISWERIEHPSEKLEIGQTINFVILSIDK 295 Query: 251 ERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMD 310 + RV LGLKQL +PW ++ + +G + G VT +TDYG FVEI GVEGLVHVSEM Sbjct: 296 IKNRVQLGLKQLQSNPWNSLEEEIKKGKVVIGTVTVVTDYGAFVEIFPGVEGLVHVSEMS 355 Query: 311 WT-NKNIHPSK-VVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVE 368 W+ K + S+ V +GD ++V++L+ D +++SL LK+ +PW+ + + G Sbjct: 356 WSKTKKLRSSQSFVKIGDKIKVLILNYDISDQKMSLSLKRLTPDPWENIEKKYKIGSIHI 415 Query: 369 GKIKSITDFGI 379 +KS T+FG+ Sbjct: 416 VTVKSFTNFGV 426 Score = 121 bits (303), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 68/194 (35%), Positives = 112/194 (57%), Gaps = 8/194 (4%) Query: 276 EGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDI 335 +G L G V N+T YG F++I G++GL H++++ W HPS+ + +G + ++L I Sbjct: 235 KGQVLRGIVKNITHYGSFIDIGGGIDGLCHITDISWERIE-HPSEKLEIGQTINFVILSI 293 Query: 336 DEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSD 395 D+ + R+ LGLKQ ++NPW E KG V G + +TD+G F+ + G++GLVH+S+ Sbjct: 294 DKIKNRVQLGLKQLQSNPWNSLEEEIKKGKVVIGTVTVVTDYGAFVEIFPGVEGLVHVSE 353 Query: 396 ISWNVAGE--EAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAI 453 +SW+ + + K GD+I ++L D +++SL +K+L DP W + KK I Sbjct: 354 MSWSKTKKLRSSQSFVKIGDKIKVLILNYDISDQKMSLSLKRLTPDP---WENIEKKYKI 410 Query: 454 VTGKVTAVDAKGAT 467 G + V K T Sbjct: 411 --GSIHIVTVKSFT 422 Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust. Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 4/80 (5%) Query: 395 DISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIV 454 DISW ++ YKKGD + +VL +D +I+LG KQL + N W N G+I Sbjct: 539 DISWIKNLNNSINIYKKGDLVKLIVLGLDLITGKINLGSKQLIK---NFWYE-NIIGSIH 594 Query: 455 TGKVTAVDAKGATVELADGV 474 TGK+ KGA ++ + Sbjct: 595 TGKIIKFFYKGAIIKFKKKI 614 >UniRef50_A7HME7 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HME7_FERNB Length = 854 Score = 230 bits (587), Expect = 9e-59, Method: Compositional matrix adjust. Identities = 161/550 (29%), Positives = 301/550 (54%), Gaps = 36/550 (6%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQ-FKNAQGE 59 + ESF QL +E + G IV G+V I + +D G K +P E+ FK Sbjct: 303 LEESFEQLLKEHENMNQVGRGKIVEGIVTEITPTGLTIDLGGKVTGVVPLEELFKELN-- 360 Query: 60 LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGG 119 E +VG+++ V ++ + + G +LS +K + ++KA E+ + V+G I ++KGG Sbjct: 361 -EYKVGEQIKVRVEKINEEDGTAILSAKKPMEKIIFDEIQKAKENGKPVSGKIIERIKGG 419 Query: 120 FTVEL-NGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQ--KRNNVVVSRRAVIES 176 + V L N + AFLPGS + +R+ + ++++F VI + ++ N+VVSR+ + + Sbjct: 420 YRVILENVVEAFLPGSESN---IREDEEIPREKMQFAVISYETRGRKTNIVVSRKKLFQK 476 Query: 177 ENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSEIV 235 D+ N + G V+GIV++++D GAFV + G+ G + +++++ + + Sbjct: 477 ----LIDEFFSNRKPGDVVEGIVESISDNGAFVKIAGITTGFIPNSEISYNTSIKAKDAL 532 Query: 236 NVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVE 295 VG + + + + ER R+ L LK L DPW +AK+Y G +TG VT++ +G FV+ Sbjct: 533 TVGKIMKFLIKEINPERKRILLSLKALLPDPWENVAKKYQIGQTVTGVVTSVKPFGFFVK 592 Query: 296 IEEGVEGLVHVSEMDWTNK-NIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPW 354 IE+GVEG V + E+ W K NI+ +VV++ D V+V +L+I+ E+R++ L K +PW Sbjct: 593 IEDGVEGFVPIEEVFWGRKGNIN--EVVSINDFVKVQILEINPEKRQMKLSYKSVIGDPW 650 Query: 355 QQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAG--EEAVREYKKG 412 ++ A+ ++GD EGK+ + G+ I ++ + ++S++SWN E+ ++E G Sbjct: 651 EKIAKKLSEGDISEGKVAKVLPNGVIIEIEPEVTAFCNISEVSWNFVDNIEDVIKE---G 707 Query: 413 DEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELAD 472 + + VL++D E ++I + +++ +P+ + +K+G I+ KV KG + L + Sbjct: 708 ESVKFQVLKIDPENKKIRVSIRKAKPNPWKAFANAHKEGDIIKVKVIKAVEKGY-IGLCE 766 Query: 473 GVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIA 532 +E Y+ S+ + L++GDE++ K ++ + + V K ++++A Sbjct: 767 EIEVYIPKSQVYEN--------LNLGDEIDGKIIKLEEQKDIYKIIVSPK---AYENSLA 815 Query: 533 TVNKQEDANF 542 T NK E +F Sbjct: 816 T-NKNESKDF 824 Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 102/373 (27%), Positives = 193/373 (51%), Gaps = 36/373 (9%) Query: 105 AETVTGVINGKVKGGFTVELNGIRA-FLPGSLVDVRP---VRDTLHLEGKELEFKVIKLD 160 + V G++ G V++ GI F+P S + +D L + GK ++F + +++ Sbjct: 488 GDVVEGIVESISDNGAFVKIAGITTGFIPNSEISYNTSIKAKDALTV-GKIMKFLIKEIN 546 Query: 161 QKRNNVVVSRRAVIES--ENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGL 217 +R +++S +A++ EN A++ Q+ G V G+V ++ +G FV + GV+G Sbjct: 547 PERKRILLSLKALLPDPWENVAKKYQI------GQTVTGVVTSVKPFGFFVKIEDGVEGF 600 Query: 218 LHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEG 277 + I ++ W R + +E+V++ D + V++L+ + E+ ++ L K + DPW IAK+ EG Sbjct: 601 VPIEEVFWGRKGNINEVVSINDFVKVQILEINPEKRQMKLSYKSVIGDPWEKIAKKLSEG 660 Query: 278 TKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTN-KNIHPSKVVNVGDVVEVMVLDID 336 G+V + G +EIE V ++SE+ W NI V+ G+ V+ VL ID Sbjct: 661 DISEGKVAKVLPNGVIIEIEPEVTAFCNISEVSWNFVDNIE--DVIKEGESVKFQVLKID 718 Query: 337 EERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDI 396 E ++I + +++ K NPW+ FA H +GD ++ K+ + G +IGL I+ + S + Sbjct: 719 PENKKIRVSIRKAKPNPWKAFANAHKEGDIIKVKVIKAVEKG-YIGLCEEIEVYIPKSQV 777 Query: 397 SWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNK------K 450 N+ GDEI +++++ +++ + V A + N +A NK + Sbjct: 778 YENL---------NLGDEIDGKIIKLEEQKDIYKIIVSPKA---YENSLATNKNESKDFE 825 Query: 451 GAIVTGKVTAVDA 463 G + GK++ +A Sbjct: 826 GVTLEGKISDANA 838 >UniRef50_B2A4N7 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A4N7_NATTJ Length = 705 Score = 229 bits (584), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 125/347 (36%), Positives = 206/347 (59%), Gaps = 15/347 (4%) Query: 34 DVVLVDAGLKSESAIPAEQFKNAQGE-LE--IQVGDEVDVALDAVEDGFGETLLSREKAK 90 D ++D G K E ++P + +GE LE + GDE+DV + V+D G+ +LS++ A Sbjct: 339 DEAMIDVGYKFEGSVPVNEMPIKEGESLEDLLSEGDEIDVKVVKVDDEEGQLILSKKWAD 398 Query: 91 RHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGK 150 + + W LE+ E+ E + + +VKGG V+L ++ F+P S VD+ V D G+ Sbjct: 399 KDKQWEQLEQLMENDEEIKAQVTEEVKGGLVVDLGQLQGFIPASHVDIHYVPDLSKYVGE 458 Query: 151 ELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVD 210 EL K I+LD+ RN +V+S++ ++E E ++++ +E + EG V G VK LTD+GAF+D Sbjct: 459 ELRLKPIELDRSRNKIVLSQKNILEQEQEEKKNKTMETITEGDIVDGTVKRLTDFGAFID 518 Query: 211 LGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAI 270 +GG+DGL HI+ ++ R+ HP + G+ + VKVL D E R+SL +K+ DP+ Sbjct: 519 IGGIDGLCHISQISHSRIDHPESELETGENVKVKVLSLDPENERISLSIKEAQPDPFETF 578 Query: 271 AKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSK---VVNVGDV 327 K+Y G + G+V ++G F+EI GVEGL H+S++ + H +K VVN GD Sbjct: 579 MKQYKSGDIVQGKVVRTVNFGAFIEITPGVEGLCHISQL----SDDHVAKTQDVVNEGDQ 634 Query: 328 VEVMVLDIDEERRRISLGLKQC-----KANPWQQFAETHNKGDRVEG 369 V V +L ID++++++SL +K+ K ++FA+ + + EG Sbjct: 635 VTVKILSIDDQQKKVSLSIKEAQGKSKKEQEQEEFAKYQDSQEEEEG 681 Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 104/326 (31%), Positives = 170/326 (52%), Gaps = 16/326 (4%) Query: 203 TDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQ 261 T+ A +D+G +G + + +M K + ++++ GDEI VKV+K D E ++ L K Sbjct: 337 TEDEAMIDVGYKFEGSVPVNEMPIKEGESLEDLLSEGDEIDVKVVKVDDEEGQLILSKKW 396 Query: 262 LGEDP-WVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIH--P 318 +D W + + ++ +VT G V++ + ++G + S +D IH P Sbjct: 397 ADKDKQWEQLEQLMENDEEIKAQVTEEVKGGLVVDLGQ-LQGFIPASHVD-----IHYVP 450 Query: 319 SKVVNVGDVVEVMVLDIDEERRRISLG----LKQCKANPWQQFAETHNKGDRVEGKIKSI 374 VG+ + + +++D R +I L L+Q + + ET +GD V+G +K + Sbjct: 451 DLSKYVGEELRLKPIELDRSRNKIVLSQKNILEQEQEEKKNKTMETITEGDIVDGTVKRL 510 Query: 375 TDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVK 434 TDFG FI + GGIDGL H+S IS + + E + G+ + VL +D E ERISL +K Sbjct: 511 TDFGAFIDI-GGIDGLCHISQISHSRI-DHPESELETGENVKVKVLSLDPENERISLSIK 568 Query: 435 QLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLV 494 + DPF ++ K G IV GKV GA +E+ GVEG S+ S D V V Sbjct: 569 EAQPDPFETFMKQYKSGDIVQGKVVRTVNFGAFIEITPGVEGLCHISQLSDDHVAKTQDV 628 Query: 495 LSVGDEVEAKFTGVDRKNRAISLSVR 520 ++ GD+V K +D + + +SLS++ Sbjct: 629 VNEGDQVTVKILSIDDQQKKVSLSIK 654 >UniRef50_A6DP56 30S ribosomal protein S1 n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DP56_9BACT Length = 463 Score = 228 bits (582), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 150/440 (34%), Positives = 248/440 (56%), Gaps = 25/440 (5%) Query: 3 ESFAQLFEESLK--EIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL 60 E FA LFEE+ + +IE + G V+G + IDK + VD G + E IP + + +GEL Sbjct: 12 EDFASLFEENSRSMKIEFKSGEAVKGKITLIDKSSIFVDFGARCEGIIPLGEVLDNKGEL 71 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 E++VGDE++ + + D GE L+ K T E AY + V G + + KGG+ Sbjct: 72 ELKVGDEIEAWV--LNDRGGEISLTV-KLSGDALNETFEAAYSEKIPVEGKVIEERKGGY 128 Query: 121 TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 TV L+G AF P S +D RP +L+L G+ F + K+D + VVSRR ++ Sbjct: 129 TVNLSGNMAFCPYSQMDSRPGDASLYL-GQTFSFLITKIDDR--GAVVSRRDYLKILAEK 185 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 +R++L E L EG E++G+++ + +G FVDLGGVDGL+ ++++WKR +E V+VGD+ Sbjct: 186 QREKLQEELVEGDEIEGVIRRIERFGFFVDLGGVDGLVPASEVSWKRNVDLNEFVSVGDQ 245 Query: 241 ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV 300 ++ K+L D E+ R++L L+ +DPW + G +V+++ D+G FVE+ EGV Sbjct: 246 VSCKILALDWEKGRITLSLRACLQDPWD--SDELFNGATFEAKVSSVQDFGAFVELIEGV 303 Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAET 360 +GL+H+S+ K I P +G+ ++V + +D ++ RISL L + + + E Sbjct: 304 DGLLHISQF----KGIQP----QIGETLKVKIDSVDFDQHRISLSLHKGEVGEAVEIVEA 355 Query: 361 HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAV---REYKKGDEIAA 417 + G +++I +G+F+GL G GL+H+S + +G+ + Y KG E Sbjct: 356 K----ELTGTVENIKPYGVFMGLSDGRSGLLHVSQLDVPKSGDATKTLEKNYAKGSEHKI 411 Query: 418 VVLQVDAERERISLGVKQLA 437 +L+V+A + + L K A Sbjct: 412 EILKVEAGKISLCLPGKAAA 431 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 74/237 (31%), Positives = 118/237 (49%), Gaps = 16/237 (6%) Query: 259 LKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHP 318 LK L E + + EG ++ G + + +G FV++ GV+GLV SE+ W +N+ Sbjct: 179 LKILAEKQREKLQEELVEGDEIEGVIRRIERFGFFVDLG-GVDGLVPASEVSW-KRNVDL 236 Query: 319 SKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFG 378 ++ V+VGD V +L +D E+ RI+L L+ C +PW E N G E K+ S+ DFG Sbjct: 237 NEFVSVGDQVSCKILALDWEKGRITLSLRACLQDPWDS-DELFN-GATFEAKVSSVQDFG 294 Query: 379 IFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAE 438 F+ L G+DGL+H+S + + G+ + + VD ++ RISL L + Sbjct: 295 AFVELIEGVDGLLHISQFKG--------IQPQIGETLKVKIDSVDFDQHRISL---SLHK 343 Query: 439 DPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVL 495 V + + + TG V + G + L+DG G L S+ + DAT L Sbjct: 344 GEVGEAVEIVEAKEL-TGTVENIKPYGVFMGLSDGRSGLLHVSQLDVPKSGDATKTL 399 Score = 88.2 bits (217), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 97/338 (28%), Positives = 158/338 (46%), Gaps = 30/338 (8%) Query: 189 LQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEI-VNVGDEITVKVL 246 + G VKG + + FVD G +G++ + ++ + + E+ + VGDEI VL Sbjct: 29 FKSGEAVKGKITLIDKSSIFVDFGARCEGIIPLGEV----LDNKGELELKVGDEIEAWVL 84 Query: 247 KFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHV 306 DR +SL +K G+ Y E + G+V G V + G Sbjct: 85 N-DR-GGEISLTVKLSGDALNETFEAAYSEKIPVEGKVIEERKGGYTVNLS-GNMAFCPY 141 Query: 307 SEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISL--GLKQCKANPWQQFAETHNKG 364 S+MD + + +G ++ ID+ +S LK ++ E +G Sbjct: 142 SQMDSRPGDAS----LYLGQTFSFLITKIDDRGAVVSRRDYLKILAEKQREKLQEELVEG 197 Query: 365 DRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISW--NVAGEEAVREYKKGDEIAAVVLQV 422 D +EG I+ I FG F+ L GG+DGLV S++SW NV E V GD+++ +L + Sbjct: 198 DEIEGVIRRIERFGFFVDL-GGVDGLVPASEVSWKRNVDLNEFV---SVGDQVSCKILAL 253 Query: 423 DAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASE 482 D E+ RI+L ++ +DP+++ N GA KV++V GA VEL +GV+G L S+ Sbjct: 254 DWEKGRITLSLRACLQDPWDSDELFN--GATFEAKVSSVQDFGAFVELIEGVDGLLHISQ 311 Query: 483 ASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 + + +G+ ++ K VD ISLS+ Sbjct: 312 FKGIQPQ-------IGETLKVKIDSVDFDQHRISLSLH 342 Score = 42.0 bits (97), Expect = 0.065, Method: Compositional matrix adjust. Identities = 67/259 (25%), Positives = 113/259 (43%), Gaps = 32/259 (12%) Query: 274 YPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVL 333 + G + G++T + FV+ EG++ + E+ + + VGD +E VL Sbjct: 29 FKSGEAVKGKITLIDKSSIFVDFGARCEGIIPLGEVLDNKGELE----LKVGDEIEAWVL 84 Query: 334 DIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVH- 392 + + ISL +K + F +++ VEGK+ G + L G + + Sbjct: 85 N--DRGGEISLTVKLSGDALNETFEAAYSEKIPVEGKVIEERKGGYTVNLSGNMAFCPYS 142 Query: 393 -----LSDISWNVAGEEAVREYKKGDEIAAVV-----LQVDAERERISLGVKQLAEDPFN 442 D S + G+ K D+ AVV L++ AE++R L ++L E Sbjct: 143 QMDSRPGDASLYL-GQTFSFLITKIDDRGAVVSRRDYLKILAEKQREKL-QEELVE---- 196 Query: 443 NWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVE 502 G + G + ++ G V+L GV+G + ASE S R D +SVGD+V Sbjct: 197 --------GDEIEGVIRRIERFGFFVDLG-GVDGLVPASEVSWKRNVDLNEFVSVGDQVS 247 Query: 503 AKFTGVDRKNRAISLSVRA 521 K +D + I+LS+RA Sbjct: 248 CKILALDWEKGRITLSLRA 266 >UniRef50_C7H149 4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H149_9FIRM Length = 703 Score = 228 bits (582), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 130/351 (37%), Positives = 205/351 (58%), Gaps = 8/351 (2%) Query: 9 FEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL---EIQVG 65 E+S+K +T G IV GV+ AI+ ++V+ G K + IP + +G+ VG Sbjct: 312 IEKSMKSPKT--GEIVEGVIDAINDKEIVVNLGCKKDGIIPNSEVALEEGQTIRDLFSVG 369 Query: 66 DEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN 125 DE+ + +DG G LLSR K + W LE A + ETV + VK G Sbjct: 370 DEIQAKVLKTDDGDGSILLSRRKMEASVHWAELEDALNNDETVKVDVVRAVKSGVIANYK 429 Query: 126 GIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQL 185 + F+P S + R + D G+ +E KVI++DQK + S + + + E + +L Sbjct: 430 EVSGFIPLSQLSERFIEDASEFVGQTMEAKVIRVDQKLGKAIFSPKQLQKEEKNKRLQEL 489 Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKV 245 + L G +++G V T+YGAFVD+GGVDGLLHI++++W ++KHPSE++ VGD I VK+ Sbjct: 490 WKKLNVGDDIEGKVMRFTEYGAFVDIGGVDGLLHISEISWGKLKHPSEVLTVGDTINVKI 549 Query: 246 LKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVH 305 L + E+ ++SLG KQ +PW I +Y G + G + + +YG F+E+E G++GL+H Sbjct: 550 LSLNPEKGKISLGYKQNMPEPWSIIDDKYKAGDNVEGDIVQIKEYGAFLELEPGLDGLIH 609 Query: 306 VSEMDWTN-KNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQ 355 +SE+ + +NI+ V+++GD VE +L+ID++RRRISL +K P Q Sbjct: 610 ISEISHSRVENIN--SVLHIGDNVEAKILEIDKDRRRISLSIKALIDPPEQ 658 Score = 154 bits (390), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 112/349 (32%), Positives = 185/349 (53%), Gaps = 17/349 (4%) Query: 100 KAYEDAETVTGVINGKVKGGFTVELNGIR-AFLPGSLVDV---RPVRDTLHLEGKELEFK 155 K+ + E V GVI+ V L + +P S V + + +RD + G E++ K Sbjct: 317 KSPKTGEIVEGVIDAINDKEIVVNLGCKKDGIIPNSEVALEEGQTIRDLFSV-GDEIQAK 375 Query: 156 VIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVD 215 V+K D ++++SRR + S + AE + L N + VK V G + V Sbjct: 376 VLKTDDGDGSILLSRRKMEASVHWAELEDALNNDET---VKVDVVRAVKSGVIANYKEVS 432 Query: 216 GLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDP----WVAIA 271 G + ++ ++ + ++ SE V G + KV++ D++ + KQL ++ + Sbjct: 433 GFIPLSQLSERFIEDASEFV--GQTMEAKVIRVDQKLGKAIFSPKQLQKEEKNKRLQELW 490 Query: 272 KRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVM 331 K+ G + G+V T+YG FV+I GV+GL+H+SE+ W K HPS+V+ VGD + V Sbjct: 491 KKLNVGDDIEGKVMRFTEYGAFVDIG-GVDGLLHISEISW-GKLKHPSEVLTVGDTINVK 548 Query: 332 VLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLV 391 +L ++ E+ +ISLG KQ PW + + GD VEG I I ++G F+ L+ G+DGL+ Sbjct: 549 ILSLNPEKGKISLGYKQNMPEPWSIIDDKYKAGDNVEGDIVQIKEYGAFLELEPGLDGLI 608 Query: 392 HLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDP 440 H+S+IS + E GD + A +L++D +R RISL +K L + P Sbjct: 609 HISEISHSRV-ENINSVLHIGDNVEAKILEIDKDRRRISLSIKALIDPP 656 Score = 125 bits (313), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 105/363 (28%), Positives = 179/363 (49%), Gaps = 22/363 (6%) Query: 175 ESENSAERDQLLENLQE----------GMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDM 223 E++N +++LE + E G V+G++ + D V+LG DG++ +++ Sbjct: 295 ENQNETTGNEMLELMDEIEKSMKSPKTGEIVEGVIDAINDKEIVVNLGCKKDGIIPNSEV 354 Query: 224 AWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQL-GEDPWVAIAKRYPEGTKLTG 282 A + + ++ +VGDEI KVLK D + L +++ W + + Sbjct: 355 ALEEGQTIRDLFSVGDEIQAKVLKTDDGDGSILLSRRKMEASVHWAELEDALNNDETVKV 414 Query: 283 RVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRI 342 V G +E V G + +S++ + + I + VG +E V+ +D++ + Sbjct: 415 DVVRAVKSGVIANYKE-VSGFIPLSQL--SERFIEDASEF-VGQTMEAKVIRVDQKLGKA 470 Query: 343 SLGLKQC----KANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISW 398 KQ K Q+ + N GD +EGK+ T++G F+ + GG+DGL+H+S+ISW Sbjct: 471 IFSPKQLQKEEKNKRLQELWKKLNVGDDIEGKVMRFTEYGAFVDI-GGVDGLLHISEISW 529 Query: 399 NVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKV 458 + GD I +L ++ E+ +ISLG KQ +P++ K G V G + Sbjct: 530 GKLKHPS-EVLTVGDTINVKILSLNPEKGKISLGYKQNMPEPWSIIDDKYKAGDNVEGDI 588 Query: 459 TAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLS 518 + GA +EL G++G + SE S RVE+ VL +GD VEAK +D+ R ISLS Sbjct: 589 VQIKEYGAFLELEPGLDGLIHISEISHSRVENINSVLHIGDNVEAKILEIDKDRRRISLS 648 Query: 519 VRA 521 ++A Sbjct: 649 IKA 651 >UniRef50_C9LUH9 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LUH9_9FIRM Length = 373 Score = 228 bits (580), Expect = 6e-58, Method: Compositional matrix adjust. Identities = 131/355 (36%), Positives = 221/355 (62%), Gaps = 10/355 (2%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVD-AGLKSESAIPAEQFKNAQGELE 61 +S + EES++E+ R +V+ VVA+D V+ AGLK++ I + + + + Sbjct: 2 KSLLEAEEESMQEV--REHDVVKATVVAVDDGQAYVNIAGLKADIPISKRELASPEPDSA 59 Query: 62 ---IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 ++V DE++V + ++ G T+ S+ +A R AW +E ED +TV I VKG Sbjct: 60 KDVVKVDDEIEVFVVSLGGENGATV-SKVRADRMVAWKEIEALKEDGQTVQAQITQVVKG 118 Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 G ++G+R F+P S +++ V+D G+ +E I++D ++ +V+SRR+++E E Sbjct: 119 GLVASVSGLRGFIPASQMELHFVKDLSIYVGQTVEALPIEIDIRKQRLVLSRRSLLEEER 178 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVG 238 +++++ L+ G ++G VK L +YGAF+D+GGVDGL HI+D+AW RVK PS++++VG Sbjct: 179 EKKQEEVFSKLEVGQIIRGTVKRLVEYGAFIDIGGVDGLAHISDLAWHRVKQPSDVLSVG 238 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE 298 DE+ V V FD E R+SL +K DPW+ A+RY EGT + G++ LTD+G F+EIE Sbjct: 239 DEVDVYVKNFDPETKRISLSVKDTMRDPWLDKAERYAEGTHIKGKIIKLTDFGAFMEIEP 298 Query: 299 GVEGLVHVSEMDWTNKNI-HPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN 352 G +GL+ + E+ ++ I + V +GD+V+V +L ID +R+RISL + + + + Sbjct: 299 GFDGLIPMGEL--ADRRIARADEAVQLGDIVKVKILHIDMKRKRISLSITRAQRD 351 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 81/261 (31%), Positives = 139/261 (53%), Gaps = 14/261 (5%) Query: 186 LENLQE-GMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 +E L+E G V+ + + G + G+ G + + M VK S + VG + Sbjct: 98 IEALKEDGQTVQAQITQVVKGGLVASVSGLRGFIPASQMELHFVKDLS--IYVGQTVEAL 155 Query: 245 VLKFDRERTRVSLGLKQL----GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV 300 ++ D + R+ L + L E + + G + G V L +YG F++I GV Sbjct: 156 PIEIDIRKQRLVLSRRSLLEEEREKKQEEVFSKLEVGQIIRGTVKRLVEYGAFIDIG-GV 214 Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAET 360 +GL H+S++ W ++ PS V++VGD V+V V + D E +RISL +K +PW AE Sbjct: 215 DGLAHISDLAW-HRVKQPSDVLSVGDEVDVYVKNFDPETKRISLSVKDTMRDPWLDKAER 273 Query: 361 HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDIS-WNVA-GEEAVREYKKGDEIAAV 418 + +G ++GKI +TDFG F+ ++ G DGL+ + +++ +A +EAV + GD + Sbjct: 274 YAEGTHIKGKIIKLTDFGAFMEIEPGFDGLIPMGELADRRIARADEAV---QLGDIVKVK 330 Query: 419 VLQVDAERERISLGVKQLAED 439 +L +D +R+RISL + + D Sbjct: 331 ILHIDMKRKRISLSITRAQRD 351 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 96/361 (26%), Positives = 171/361 (47%), Gaps = 24/361 (6%) Query: 185 LLENLQEGME-------VKGIVKNLTDYGAFVDLGGVDGLLHIT--DMAWKRVKHPSEIV 235 LLE +E M+ VK V + D A+V++ G+ + I+ ++A ++V Sbjct: 4 LLEAEEESMQEVREHDVVKATVVAVDDGQAYVNIAGLKADIPISKRELASPEPDSAKDVV 63 Query: 236 NVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVE 295 V DEI V V+ E ++ W I +G + ++T + G Sbjct: 64 KVDDEIEVFVVSLGGENGATVSKVRADRMVAWKEIEALKEDGQTVQAQITQVVKGGLVAS 123 Query: 296 IEEGVEGLVHVSEMDWTNKNIHPSK--VVNVGDVVEVMVLDIDEERRRISLG----LKQC 349 + G+ G + S+M+ +H K + VG VE + ++ID ++R+ L L++ Sbjct: 124 VS-GLRGFIPASQME-----LHFVKDLSIYVGQTVEALPIEIDIRKQRLVLSRRSLLEEE 177 Query: 350 KANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREY 409 + ++ G + G +K + ++G FI + GG+DGL H+SD++W+ + + Sbjct: 178 REKKQEEVFSKLEVGQIIRGTVKRLVEYGAFIDI-GGVDGLAHISDLAWHRVKQPS-DVL 235 Query: 410 KKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVE 469 GDE+ V D E +RISL VK DP+ + +G + GK+ + GA +E Sbjct: 236 SVGDEVDVYVKNFDPETKRISLSVKDTMRDPWLDKAERYAEGTHIKGKIIKLTDFGAFME 295 Query: 470 LADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSV-RAKDEADEK 528 + G +G + E + R+ A + +GD V+ K +D K + ISLS+ RA+ +A+ Sbjct: 296 IEPGFDGLIPMGELADRRIARADEAVQLGDIVKVKILHIDMKRKRISLSITRAQRDAEVS 355 Query: 529 D 529 D Sbjct: 356 D 356 Score = 61.2 bits (147), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 32/89 (35%), Positives = 52/89 (58%), Gaps = 1/89 (1%) Query: 187 ENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKV 245 E EG +KG + LTD+GAF+++ G DGL+ + ++A +R+ E V +GD + VK+ Sbjct: 272 ERYAEGTHIKGKIIKLTDFGAFMEIEPGFDGLIPMGELADRRIARADEAVQLGDIVKVKI 331 Query: 246 LKFDRERTRVSLGLKQLGEDPWVAIAKRY 274 L D +R R+SL + + D V+ Y Sbjct: 332 LHIDMKRKRISLSITRAQRDAEVSDVSYY 360 >UniRef50_D2L2R4 RNA binding S1 domain protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L2R4_9DELT Length = 507 Score = 227 bits (579), Expect = 7e-58, Method: Compositional matrix adjust. Identities = 149/434 (34%), Positives = 235/434 (54%), Gaps = 12/434 (2%) Query: 5 FAQLFEESLKEI--ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEI 62 FA L E SL E E G + G V+A+ V+VD G K + +F + G L I Sbjct: 17 FAALMEASLAERGGEISVGDRITGPVIAVTDTTVVVDTGTKLDGVADKSEFLDENGALTI 76 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 G+ V + + +V G+ + + L A+E V G + KGGF V Sbjct: 77 SEGEAVTLYVVSVR---GDEVALSKALTGQGGAEALLAAFEAGVPVEGKVTASRKGGFDV 133 Query: 123 ELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 E+ RAF P S +D+ + G+ F + ++ N+VVSRR + E E + Sbjct: 134 EILHRRAFCPVSQIDLAFTDNPEVHVGQTYTFLITTFERDGKNIVVSRRKLQEQERAESE 193 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEI 241 + LE++ G + +V +GAFV++ G++GL+H+++++W R + + V++G + Sbjct: 194 LRFLESVNPGDVIPAVVTRFAAFGAFVEVAPGLEGLVHLSELSWSRAEKAEDAVDLGQAV 253 Query: 242 TVKVLKFDRE---RTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE 298 TVKVL FDR+ R R+SL +KQ G DPW + +++ G ++ G+VT L D+G FVEI Sbjct: 254 TVKVLSFDRDKKGRPRISLSIKQAGPDPWDTVGEKFAAGDRVEGKVTRLADFGAFVEIAP 313 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFA 358 G+EGL+HVSEM + PS VV+ G+ V V V D+D +RRISL LK+ +PW + Sbjct: 314 GIEGLIHVSEMSHVRRIAKPSDVVSPGETVTVAVKDVDLSKRRISLSLKEVAGDPWAAVS 373 Query: 359 ETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVRE-YKKGDEIAA 417 +T G VEG +++ +G+FI L G+ GL+ S + A E A E GD ++ Sbjct: 374 DTFAIGSTVEGTVENRQQYGLFINLAPGVTGLLPASKL--RDALEPAPYEKVSSGDTVSV 431 Query: 418 VVLQVDAERERISL 431 VV ++D E+ +++L Sbjct: 432 VVSEIDTEKRKMTL 445 Score = 142 bits (358), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 99/295 (33%), Positives = 149/295 (50%), Gaps = 16/295 (5%) Query: 235 VNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPE----GTKLTGRVTNLTDY 290 V+VG T + F+R+ + + ++L E R+ E G + VT + Sbjct: 157 VHVGQTYTFLITTFERDGKNIVVSRRKLQEQERAESELRFLESVNPGDVIPAVVTRFAAF 216 Query: 291 GCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEE---RRRISLGLK 347 G FVE+ G+EGLVH+SE+ W+ V++G V V VL D + R RISL +K Sbjct: 217 GAFVEVAPGLEGLVHLSELSWSRAE-KAEDAVDLGQAVTVKVLSFDRDKKGRPRISLSIK 275 Query: 348 QCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVR 407 Q +PW E GDRVEGK+ + DFG F+ + GI+GL+H+S++S + Sbjct: 276 QAGPDPWDTVGEKFAAGDRVEGKVTRLADFGAFVEIAPGIEGLIHVSEMSHVRRIAKPSD 335 Query: 408 EYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKK---GAIVTGKVTAVDAK 464 G+ + V VD + RISL +K++A DP W A++ G+ V G V Sbjct: 336 VVSPGETVTVAVKDVDLSKRRISLSLKEVAGDP---WAAVSDTFAIGSTVEGTVENRQQY 392 Query: 465 GATVELADGVEGYLRASEASRDRVEDATL-VLSVGDEVEAKFTGVDRKNRAISLS 518 G + LA GV G L AS+ RD +E A +S GD V + +D + R ++L+ Sbjct: 393 GLFINLAPGVTGLLPASKL-RDALEPAPYEKVSSGDTVSVVVSEIDTEKRKMTLA 446 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 80/252 (31%), Positives = 122/252 (48%), Gaps = 13/252 (5%) Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDID 336 G + G+VT G VEI VS++D + +P V+VG ++ + Sbjct: 116 GVPVEGKVTASRKGGFDVEILH-RRAFCPVSQIDLAFTD-NPE--VHVGQTYTFLITTFE 171 Query: 337 EERRRISLGLK----QCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVH 392 + + I + + Q +A +F E+ N GD + + FG F+ + G++GLVH Sbjct: 172 RDGKNIVVSRRKLQEQERAESELRFLESVNPGDVIPAVVTRFAAFGAFVEVAPGLEGLVH 231 Query: 393 LSDISWNVAGEEAVREYKKGDEIAAVVLQVDAE---RERISLGVKQLAEDPFNNWVALNK 449 LS++SW+ A E+A G + VL D + R RISL +KQ DP++ Sbjct: 232 LSELSWSRA-EKAEDAVDLGQAVTVKVLSFDRDKKGRPRISLSIKQAGPDPWDTVGEKFA 290 Query: 450 KGAIVTGKVTAVDAKGATVELADGVEGYLRASEASR-DRVEDATLVLSVGDEVEAKFTGV 508 G V GKVT + GA VE+A G+EG + SE S R+ + V+S G+ V V Sbjct: 291 AGDRVEGKVTRLADFGAFVEIAPGIEGLIHVSEMSHVRRIAKPSDVVSPGETVTVAVKDV 350 Query: 509 DRKNRAISLSVR 520 D R ISLS++ Sbjct: 351 DLSKRRISLSLK 362 >UniRef50_Q0AXA2 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AXA2_SYNWW Length = 687 Score = 226 bits (575), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 133/354 (37%), Positives = 215/354 (60%), Gaps = 13/354 (3%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK----NAQG 58 ESFA+L E G +++G V+ + D V+VD G KSE IP + ++ Sbjct: 318 ESFAKLEAEMADFTTPNKGDVIKGKVIQVLDDEVMVDVGGKSEGIIPLREMSLQDIDSAK 377 Query: 59 ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 EL ++VGDE++V + +D G LLS++K LE+++++ + +TG + G VKG Sbjct: 378 EL-VEVGDEIEVMVLKWDDD-GTILLSKKKVDAKILLDELEESFKEGKVITGTVTGSVKG 435 Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKR---NNVVVSRRAVIE 175 G V++ GI AFLP S V+ V++ +EL FK+I+ ++ + + VV+SR+ ++ Sbjct: 436 GLLVDV-GIVAFLPASHVEDGYVKNLDEYINRELSFKIIEFNRNKRRGSQVVLSRKELVA 494 Query: 176 SENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIV 235 E + ++ Q E ++EG KG +K L DYGAF+DLGG +GLLH++++A R+ PS+++ Sbjct: 495 EEKAKQKKQFWEEIEEGQVRKGRIKRLVDYGAFIDLGGYEGLLHVSEIAHTRIDQPSDVL 554 Query: 236 NVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVE 295 G+EI V +L DRE+ RVSL K+L + PW + +++ EG + G V + +G FVE Sbjct: 555 QEGEEIDVYILALDREKERVSLSRKKLLKSPWEIVMEKFQEGDIIEGTVVRIAPFGAFVE 614 Query: 296 IEEGVEGLVHVSEMDWTNKNIH-PSKVVNVGDVVEVMVLDIDEERRRISLGLKQ 348 IE GV+GLVH+S++ N + P VV V + +++ +L ID E +RI L LK+ Sbjct: 615 IEAGVDGLVHISQL--ANHRVEKPEDVVQVNEKIKIKILSIDPEEKRIGLSLKE 666 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 98/317 (30%), Positives = 168/317 (52%), Gaps = 18/317 (5%) Query: 126 GIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQL 185 GI SL D+ ++ + + G E+E V+K D +++S++ V + D+L Sbjct: 361 GIIPLREMSLQDIDSAKELVEV-GDEIEVMVLKWDDD-GTILLSKKKV---DAKILLDEL 415 Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKV 245 E+ +EG + G V G VD+G V L + + VK+ E +N E++ K+ Sbjct: 416 EESFKEGKVITGTVTGSVKGGLLVDVGIV-AFLPASHVEDGYVKNLDEYIN--RELSFKI 472 Query: 246 LKFDRERTR---VSLGLKQLGEDPWVAIAKRY----PEGTKLTGRVTNLTDYGCFVEIEE 298 ++F+R + R V L K+L + K++ EG GR+ L DYG F+++ Sbjct: 473 IEFNRNKRRGSQVVLSRKELVAEEKAKQKKQFWEEIEEGQVRKGRIKRLVDYGAFIDLG- 531 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFA 358 G EGL+HVSE+ T + PS V+ G+ ++V +L +D E+ R+SL K+ +PW+ Sbjct: 532 GYEGLLHVSEIAHTRID-QPSDVLQEGEEIDVYILALDREKERVSLSRKKLLKSPWEIVM 590 Query: 359 ETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAV 418 E +GD +EG + I FG F+ ++ G+DGLVH+S ++ N E+ + ++I Sbjct: 591 EKFQEGDIIEGTVVRIAPFGAFVEIEAGVDGLVHISQLA-NHRVEKPEDVVQVNEKIKIK 649 Query: 419 VLQVDAERERISLGVKQ 435 +L +D E +RI L +K+ Sbjct: 650 ILSIDPEEKRIGLSLKE 666 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 103/356 (28%), Positives = 190/356 (53%), Gaps = 20/356 (5%) Query: 195 VKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERT 253 +KG V + D VD+GG +G++ + +M+ + + E+V VGDEI V VLK+D + T Sbjct: 339 IKGKVIQVLDDEVMVDVGGKSEGIIPLREMSLQDIDSAKELVEVGDEIEVMVLKWDDDGT 398 Query: 254 RVSLGLKQLGEDPWV-AIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEM-DW 311 + L K++ + + + + EG +TG VT G V++ G+ + S + D Sbjct: 399 -ILLSKKKVDAKILLDELEESFKEGKVITGTVTGSVKGGLLVDV--GIVAFLPASHVEDG 455 Query: 312 TNKNIHPSKVVNVGDVVEVMVLDIDEERRR---ISLGLKQC----KANPWQQFAETHNKG 364 KN+ + + +++ + +RR + L K+ KA +QF E +G Sbjct: 456 YVKNLDEY----INRELSFKIIEFNRNKRRGSQVVLSRKELVAEEKAKQKKQFWEEIEEG 511 Query: 365 DRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDA 424 +G+IK + D+G FI L GG +GL+H+S+I+ + ++ ++G+EI +L +D Sbjct: 512 QVRKGRIKRLVDYGAFIDL-GGYEGLLHVSEIA-HTRIDQPSDVLQEGEEIDVYILALDR 569 Query: 425 ERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEAS 484 E+ER+SL K+L + P+ + ++G I+ G V + GA VE+ GV+G + S+ + Sbjct: 570 EKERVSLSRKKLLKSPWEIVMEKFQEGDIIEGTVVRIAPFGAFVEIEAGVDGLVHISQLA 629 Query: 485 RDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR-AKDEADEKDAIATVNKQED 539 RVE V+ V ++++ K +D + + I LS++ A +E + ++ + KQE+ Sbjct: 630 NHRVEKPEDVVQVNEKIKIKILSIDPEEKRIGLSLKEALNEMENQEVQDYMEKQEE 685 >UniRef50_B3WE79 30S Ribosomal protein S1 n=52 Tax=Firmicutes RepID=B3WE79_LACCB Length = 439 Score = 225 bits (574), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 136/373 (36%), Positives = 220/373 (58%), Gaps = 16/373 (4%) Query: 2 TESFAQLFEESLKEIET-RPGSIVRGVVVAI-DKDVVLVDAGLKSESAIPAEQFKNAQGE 59 TE+ A ++LK + T + G V+ V+A+ DK +++ G E +P ++ + Q Sbjct: 10 TETMA----DALKSVTTVKIGDTVKADVLAVEDKQLIVGIEGTGVEGVVPIKEL-STQPI 64 Query: 60 LEI----QVGDEVD-VALDAV--EDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVI 112 +I +VGD++D V L V + G+ LLS+ + + + W ++ YE ET+T + Sbjct: 65 DDIHDVAKVGDKLDLVVLSTVGKDKENGQFLLSKRRLEAQKVWKEIQAKYEAGETITAPV 124 Query: 113 NGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRA 172 VKGG V G+R F+P S+V+ V D +GKELEFK+I+++ N +++S RA Sbjct: 125 TSVVKGGLVVNA-GVRGFVPASMVEDHFVEDLSQYKGKELEFKIIEIEPSENRLILSHRA 183 Query: 173 VIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPS 232 ++E+ + R ++ +Q G V+G V LT++GAFVDLGGVDGL+H++++++ V PS Sbjct: 184 IVEASKAEARKEIFAKIQPGDTVEGKVARLTNFGAFVDLGGVDGLVHVSEISFDHVDKPS 243 Query: 233 EIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGC 292 +++ VG EI VKVL D +R R+SL +K PW I ++ P G+ LTG V LT +G Sbjct: 244 DVLKVGQEIKVKVLNVDPDRNRISLSIKATLPQPWDDIEEKAPAGSVLTGTVKRLTTFGA 303 Query: 293 FVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN 352 FVE+ GVEGLVH+S++ + P+ V+ G V+V VL +D + R++L +K + Sbjct: 304 FVEVFPGVEGLVHISQISHEHVAT-PADVLKEGQEVQVKVLSVDPDAHRLALSIKALQER 362 Query: 353 PWQQFAETHNKGD 365 P E+H G+ Sbjct: 363 PAGSEEESHEGGN 375 Score = 124 bits (312), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 99/321 (30%), Positives = 164/321 (51%), Gaps = 17/321 (5%) Query: 213 GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKF---DRERTRVSLGLKQL-GEDPWV 268 GV+G++ I +++ + + ++ VGD++ + VL D+E + L ++L + W Sbjct: 49 GVEGVVPIKELSTQPIDDIHDVAKVGDKLDLVVLSTVGKDKENGQFLLSKRRLEAQKVWK 108 Query: 269 AIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEM-DWTNKNIHPSKVVNVGDV 327 I +Y G +T VT++ G V GV G V S + D +++ K G Sbjct: 109 EIQAKYEAGETITAPVTSVVKGGLVVN--AGVRGFVPASMVEDHFVEDLSQYK----GKE 162 Query: 328 VEVMVLDIDEERRRISLG----LKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGL 383 +E +++I+ R+ L ++ KA ++ GD VEGK+ +T+FG F+ L Sbjct: 163 LEFKIIEIEPSENRLILSHRAIVEASKAEARKEIFAKIQPGDTVEGKVARLTNFGAFVDL 222 Query: 384 DGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNN 443 GG+DGLVH+S+IS++ ++ K G EI VL VD +R RISL +K P+++ Sbjct: 223 -GGVDGLVHVSEISFDHV-DKPSDVLKVGQEIKVKVLNVDPDRNRISLSIKATLPQPWDD 280 Query: 444 WVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEA 503 G+++TG V + GA VE+ GVEG + S+ S + V VL G EV+ Sbjct: 281 IEEKAPAGSVLTGTVKRLTTFGAFVEVFPGVEGLVHISQISHEHVATPADVLKEGQEVQV 340 Query: 504 KFTGVDRKNRAISLSVRAKDE 524 K VD ++LS++A E Sbjct: 341 KVLSVDPDAHRLALSIKALQE 361 >UniRef50_A2ID48 RpsA n=1 Tax=Pasteuria ramosa RepID=A2ID48_9BACL Length = 392 Score = 225 bits (573), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 125/360 (34%), Positives = 208/360 (57%), Gaps = 7/360 (1%) Query: 8 LFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK----NAQGELEIQ 63 + EE I GS+V G V IDK+ L+ E+ +P + N G++ ++ Sbjct: 1 MSEEMNSTIPFEIGSLVTGSVTKIDKNQALIKIAEDIEAILPISELSCLRINEVGDM-LK 59 Query: 64 VGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVE 123 + DE+++ + +++ + +LS+ +AW L+ YE+ E + ++ VKGG ++ Sbjct: 60 LDDELELEVLRLDEEENKFILSKRAVDAKKAWPFLQHKYENNENIEAKVSDVVKGGLVID 119 Query: 124 LNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERD 183 L G+R F+P SLV+ V D + + + K+ ++DQ N +++S RAV E +R+ Sbjct: 120 L-GVRGFVPASLVECHYVEDFSDYKDRVITMKIAEIDQDSNKLILSCRAVHEEAAQHQRE 178 Query: 184 QLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITV 243 N++ G V GIV+ LTD+GAFVD+G VDGL+HI+ ++W+RV HPS+++N+GDE+ Sbjct: 179 ATFNNIEIGSVVDGIVRRLTDFGAFVDVGAVDGLVHISQISWQRVNHPSDVLNIGDEVKC 238 Query: 244 KVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGL 303 KVLKFDRE R+SL ++ PW + + E + G V L +G FVEI GVEGL Sbjct: 239 KVLKFDRESGRISLSIRDTQPGPWSGVEDQLVENDIVKGVVKRLVSFGAFVEILPGVEGL 298 Query: 304 VHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNK 363 +H+SE+ + + PS+++ G + V +L++D RR+SL + + N Q+ + NK Sbjct: 299 MHISEISHRHI-VTPSEILKEGQEILVKILNVDSNARRVSLTMCDVEQNTSQKSENSSNK 357 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 107/341 (31%), Positives = 176/341 (51%), Gaps = 22/341 (6%) Query: 101 AYEDAETVTGVINGKVKGGFTVEL-NGIRAFLP---GSLVDVRPVRDTLHLEGKELEFKV 156 +E VTG + K +++ I A LP S + + V D L L+ ELE +V Sbjct: 10 PFEIGSLVTGSVTKIDKNQALIKIAEDIEAILPISELSCLRINEVGDMLKLD-DELELEV 68 Query: 157 IKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDG 216 ++LD++ N ++S+RAV + EN E +E K V ++ G +DLG V G Sbjct: 69 LRLDEEENKFILSKRAVDAKKAWPFLQHKYEN-NENIEAK--VSDVVKGGLVIDLG-VRG 124 Query: 217 LLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWV----AIAK 272 + + + V+ S+ + IT+K+ + D++ ++ L + + E+ A Sbjct: 125 FVPASLVECHYVEDFSDYKD--RVITMKIAEIDQDSNKLILSCRAVHEEAAQHQREATFN 182 Query: 273 RYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMV 332 G+ + G V LTD+G FV++ V+GLVH+S++ W N HPS V+N+GD V+ V Sbjct: 183 NIEIGSVVDGIVRRLTDFGAFVDVG-AVDGLVHISQISWQRVN-HPSDVLNIGDEVKCKV 240 Query: 333 LDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVH 392 L D E RISL ++ + PW + + D V+G +K + FG F+ + G++GL+H Sbjct: 241 LKFDRESGRISLSIRDTQPGPWSGVEDQLVENDIVKGVVKRLVSFGAFVEILPGVEGLMH 300 Query: 393 LSDISWN--VAGEEAVREYKKGDEIAAVVLQVDAERERISL 431 +S+IS V E ++E G EI +L VD+ R+SL Sbjct: 301 ISEISHRHIVTPSEILKE---GQEILVKILNVDSNARRVSL 338 Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 91/356 (25%), Positives = 168/356 (47%), Gaps = 21/356 (5%) Query: 192 GMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDR 250 G V G V + A + + ++ +L I++++ R+ +++ + DE+ ++VL+ D Sbjct: 14 GSLVTGSVTKIDKNQALIKIAEDIEAILPISELSCLRINEVGDMLKLDDELELEVLRLDE 73 Query: 251 ERTRVSLGLKQL-GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEM 309 E + L + + + W + +Y + +V+++ G +++ GV G V S + Sbjct: 74 EENKFILSKRAVDAKKAWPFLQHKYENNENIEAKVSDVVKGGLVIDL--GVRGFVPASLV 131 Query: 310 DWTNKNIHPSKVVNVGD----VVEVMVLDIDEERRRISLGLKQCKANPWQQFAE-THNK- 363 + V + D V+ + + +ID++ ++ L + Q E T N Sbjct: 132 EC-------HYVEDFSDYKDRVITMKIAEIDQDSNKLILSCRAVHEEAAQHQREATFNNI 184 Query: 364 --GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQ 421 G V+G ++ +TDFG F+ + G +DGLVH+S ISW + GDE+ VL+ Sbjct: 185 EIGSVVDGIVRRLTDFGAFVDV-GAVDGLVHISQISWQRVNHPS-DVLNIGDEVKCKVLK 242 Query: 422 VDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRAS 481 D E RISL ++ P++ + IV G V + + GA VE+ GVEG + S Sbjct: 243 FDRESGRISLSIRDTQPGPWSGVEDQLVENDIVKGVVKRLVSFGAFVEILPGVEGLMHIS 302 Query: 482 EASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQ 537 E S + + +L G E+ K VD R +SL++ ++ + + + NKQ Sbjct: 303 EISHRHIVTPSEILKEGQEILVKILNVDSNARRVSLTMCDVEQNTSQKSENSSNKQ 358 >UniRef50_P38494 30S ribosomal protein S1 homolog n=22 Tax=Bacillales RepID=RS1H_BACSU Length = 382 Score = 223 bits (568), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 131/338 (38%), Positives = 201/338 (59%), Gaps = 10/338 (2%) Query: 21 GSIVRGVVVAI-DKDVVLVDAGLKSESAIPAEQFKNAQGELE---IQVGDEVDVALDAVE 76 G +V+G+V + DK V + +K IP + + E ++V DE+D+ + VE Sbjct: 16 GDVVKGIVTKVEDKHVDVEIINVKQSGIIPISELSSLHVEKASDVVKVDDELDLKVTKVE 75 Query: 77 DGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLV 136 D +LS+ AW LEK +E E + VKGG V++ G+R F+P SLV Sbjct: 76 DD--ALILSKRAVDADRAWEDLEKKFETKEVFEAEVKDVVKGGLVVDI-GVRGFIPASLV 132 Query: 137 DVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVK 196 + V D +GK L V++LD+ +N V++S RAV+ESE + ++ +LL++L+ G + Sbjct: 133 EAHFVEDFTDYKGKTLSLLVVELDRDKNRVILSHRAVVESEQANKKQELLQSLEVGSVLD 192 Query: 197 GIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVS 256 G V+ LTD+GAFVD+GG+DGL+HI+ ++ V+ PS++V G E+ VKVL DR+ R+S Sbjct: 193 GKVQRLTDFGAFVDIGGIDGLVHISQLSHSHVEKPSDVVEEGQEVKVKVLSVDRDNERIS 252 Query: 257 LGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNI 316 L +K PW I ++ G L G V L +G FVEI GVEGLVH+S++ +NK+I Sbjct: 253 LSIKDTLPGPWNQIGEKVKPGDVLEGTVQRLVSFGAFVEILPGVEGLVHISQI--SNKHI 310 Query: 317 -HPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP 353 P +V+ G V+V VLD++E RISL +++ + P Sbjct: 311 GTPHEVLEEGQTVKVKVLDVNENEERISLSMRELEETP 348 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 97/300 (32%), Positives = 161/300 (53%), Gaps = 27/300 (9%) Query: 151 ELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGI----VKNLTDYG 206 EL+ KV K++ + +++S+RAV + D+ E+L++ E K + VK++ G Sbjct: 66 ELDLKVTKVED--DALILSKRAV-------DADRAWEDLEKKFETKEVFEAEVKDVVKGG 116 Query: 207 AFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDP 266 VD+G V G + + + V+ ++ G +++ V++ DR++ RV L + + E Sbjct: 117 LVVDIG-VRGFIPASLVEAHFVEDFTDYK--GKTLSLLVVELDRDKNRVILSHRAVVESE 173 Query: 267 WV----AIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVV 322 + + G+ L G+V LTD+G FV+I G++GLVH+S++ ++ PS VV Sbjct: 174 QANKKQELLQSLEVGSVLDGKVQRLTDFGAFVDIG-GIDGLVHISQLSHSHVE-KPSDVV 231 Query: 323 NVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIG 382 G V+V VL +D + RISL +K PW Q E GD +EG ++ + FG F+ Sbjct: 232 EEGQEVKVKVLSVDRDNERISLSIKDTLPGPWNQIGEKVKPGDVLEGTVQRLVSFGAFVE 291 Query: 383 LDGGIDGLVHLSDISWNVAG--EEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDP 440 + G++GLVH+S IS G E + E G + VL V+ ERISL +++L E P Sbjct: 292 ILPGVEGLVHISQISNKHIGTPHEVLEE---GQTVKVKVLDVNENEERISLSMRELEETP 348 Score = 117 bits (294), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 102/348 (29%), Positives = 173/348 (49%), Gaps = 28/348 (8%) Query: 195 VKGIVKNLTDYGAFVDLGGV--DGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRER 252 VKGIV + D V++ V G++ I++++ V+ S++V V DE+ +KV K E Sbjct: 19 VKGIVTKVEDKHVDVEIINVKQSGIIPISELSSLHVEKASDVVKVDDELDLKVTKV--ED 76 Query: 253 TRVSLGLKQLGED-PWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEM-- 309 + L + + D W + K++ V ++ G V+I GV G + S + Sbjct: 77 DALILSKRAVDADRAWEDLEKKFETKEVFEAEVKDVVKGGLVVDI--GVRGFIPASLVEA 134 Query: 310 ----DWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC----KANPWQQFAETH 361 D+T+ G + ++V+++D ++ R+ L + +AN Q+ ++ Sbjct: 135 HFVEDFTDYK---------GKTLSLLVVELDRDKNRVILSHRAVVESEQANKKQELLQSL 185 Query: 362 NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQ 421 G ++GK++ +TDFG F+ + GGIDGLVH+S +S + E+ ++G E+ VL Sbjct: 186 EVGSVLDGKVQRLTDFGAFVDI-GGIDGLVHISQLSHSHV-EKPSDVVEEGQEVKVKVLS 243 Query: 422 VDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRAS 481 VD + ERISL +K P+N K G ++ G V + + GA VE+ GVEG + S Sbjct: 244 VDRDNERISLSIKDTLPGPWNQIGEKVKPGDVLEGTVQRLVSFGAFVEILPGVEGLVHIS 303 Query: 482 EASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKD 529 + S + VL G V+ K V+ ISLS+R +E + D Sbjct: 304 QISNKHIGTPHEVLEEGQTVKVKVLDVNENEERISLSMRELEETPKAD 351 >UniRef50_Q0TNG2 Ribosomal protein S1 family n=9 Tax=Clostridium perfringens RepID=Q0TNG2_CLOP1 Length = 378 Score = 221 bits (563), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 125/342 (36%), Positives = 213/342 (62%), Gaps = 8/342 (2%) Query: 21 GSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE--LEIQVGDEVDVALDAVEDG 78 G IV+G V+++ D ++V+ G ++ +P + N + I V D++ V + + +DG Sbjct: 22 GEIVKGKVISVKNDEIIVNIGHFADGVVPRNEISNDKNFDINSINVDDDIFVMVLSGDDG 81 Query: 79 FGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDV 138 G LLS+++A + W L++A+E+ +++ + VKGG + NG+R F+P S Sbjct: 82 EGNVLLSKKRADAIKVWDDLKEAFEEEKSIKVSLKEVVKGGIVGDFNGLRVFMPASQCAG 141 Query: 139 RPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGI 198 R + + L GK LE +VI+ +++ VVVSRR + E + E+ L +++EG + KG Sbjct: 142 RRIENLEELVGKTLEVRVIEFNKENRKVVVSRRVIDEEIRNNEKKALWSSIKEGEKRKGK 201 Query: 199 VKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLG 258 V L +GAFVD+GGV+GL+H++DM+W RV P E+V+VGDE+ V V + D +R R++L Sbjct: 202 VTRLAKFGAFVDIGGVEGLVHLSDMSWSRVHKPEEVVSVGDEVEVFVSEVDMDRERIALS 261 Query: 259 LKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNI-H 317 LK + ++PW + + G ++G+VTN G FVE+ G+EGLVH+SE+ T++NI Sbjct: 262 LKDVIKNPWETL-EGLKVGDVVSGKVTNFIKVGAFVEVLPGIEGLVHISEI--TDENIAK 318 Query: 318 PSKVVNVGDVVEVMVLDIDEERRRISLGLKQC--KANPWQQF 357 PS ++ +G V+V +L+ID+E +++SL +K +N + Q+ Sbjct: 319 PSDILELGQEVKVKILNIDDENKKMSLSIKDAVETSNEYMQY 360 Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 77/237 (32%), Positives = 134/237 (56%), Gaps = 19/237 (8%) Query: 324 VGDVVEVMVLDIDEERRRISLGLK----QCKANPWQQFAETHNKGDRVEGKIKSITDFGI 379 VG +EV V++ ++E R++ + + + + N + + +G++ +GK+ + FG Sbjct: 151 VGKTLEVRVIEFNKENRKVVVSRRVIDEEIRNNEKKALWSSIKEGEKRKGKVTRLAKFGA 210 Query: 380 FIGLDGGIDGLVHLSDISWN-VAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAE 438 F+ + GG++GLVHLSD+SW+ V E V GDE+ V +VD +RERI+L +K + + Sbjct: 211 FVDI-GGVEGLVHLSDMSWSRVHKPEEVVSV--GDEVEVFVSEVDMDRERIALSLKDVIK 267 Query: 439 DPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVG 498 +P+ L K G +V+GKVT GA VE+ G+EG + SE + + + + +L +G Sbjct: 268 NPWETLEGL-KVGDVVSGKVTNFIKVGAFVEVLPGIEGLVHISEITDENIAKPSDILELG 326 Query: 499 DEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNK--QEDANFSNNAMAEAFKA 553 EV+ K +D +N+ +SLS+ KDA+ T N+ Q + ++A+ FK Sbjct: 327 QEVKVKILNIDDENKKMSLSI--------KDAVETSNEYMQYNDEEEGYSLADLFKG 375 >UniRef50_B1LBI3 RNA binding S1 domain protein n=5 Tax=Thermotogaceae RepID=B1LBI3_THESQ Length = 543 Score = 220 bits (561), Expect = 9e-56, Method: Compositional matrix adjust. Identities = 148/471 (31%), Positives = 261/471 (55%), Gaps = 24/471 (5%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVE 76 E R G IV+GVV+ + D V+VD G KSE +P + + E +VG+ ++ L + Sbjct: 18 EFRRGQIVKGVVIGKEDDGVVVDFGGKSEGFVPVNELIKSLDEY--KVGE--NLTLQILN 73 Query: 77 DGFGE-TLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGI-RAFLPGS 134 + E ++LS + + L K YE+ + V + + KGG+ V L G+ AFLPGS Sbjct: 74 LNYEERSILSERRPVLRKTLEELRKDYEEKKPVKARVVSQTKGGYNVLLKGVVSAFLPGS 133 Query: 135 LVDVR---PVRDTLHLEGKELEFKVIKLDQKRN--NVVVSRRAVIESENSAERDQLLENL 189 +R P+ + KE+E ++++ Q + +VVSRRA+ + ++ Sbjct: 134 HSLLRRNDPIPE------KEIEVIILEMVQTKRGPRIVVSRRAL----QDKKIEEFFSEK 183 Query: 190 QEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKF 248 + G V+G VK +++ G V++ GV G + +++++ P +IV G IT K+++ Sbjct: 184 KVGDIVEGTVKGISNAGVEVEISEGVRGFIPRSELSYDTRISPEDIVKPGQNITAKIIEL 243 Query: 249 DRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSE 308 D+E+ V L LK+L DPW + ++YP G + G V ++ +G FV +E GVEGLV SE Sbjct: 244 DKEKKNVILSLKRLMPDPWEKVEEKYPVGKVVNGEVISIHPFGFFVRLEPGVEGLVPRSE 303 Query: 309 MDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVE 368 + W N +VV+ GD+V+V V+++D+E R+++L K+ K +PW+ + +N + V Sbjct: 304 VFWGNTRKSLEEVVSAGDLVKVEVINVDKENRKLTLSYKKAKGDPWENIEDRYNVNNVVT 363 Query: 369 GKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERER 428 GK+ I G F+ L+ G++G V +S+ISW E K G+++ +L++D E + Sbjct: 364 GKVTGIIKQGAFVELEEGVEGFVPVSEISWKRIDEPG-EILKIGEKVKVKILKIDKENRK 422 Query: 429 ISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELAD-GVEGYL 478 I+L +K+ E+P+ + + +IV+G + + G VE+ + +EG++ Sbjct: 423 ITLSIKRTQENPWERALKELETDSIVSGTIKKIVNSGVVVEVEEYDLEGFV 473 Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 118/428 (27%), Positives = 210/428 (49%), Gaps = 19/428 (4%) Query: 102 YEDAETVTGVINGKVKGGFTVELNG-IRAFLPGSLVDVRPVRDTL--HLEGKELEFKVIK 158 + + V GV+ GK G V+ G F+P V + +L + G+ L +++ Sbjct: 19 FRRGQIVKGVVIGKEDDGVVVDFGGKSEGFVP-----VNELIKSLDEYKVGENLTLQILN 73 Query: 159 LDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLL 218 L+ + +++ RR V+ ++L ++ +E VK V + T G V L GV Sbjct: 74 LNYEERSILSERRPVL----RKTLEELRKDYEEKKPVKARVVSQTKGGYNVLLKGVVSAF 129 Query: 219 HITDMAWKRVKHPSEIVNVGDEITVKVLKFDRER--TRVSLGLKQLGEDPWVAIAKRYPE 276 + R P EI V +L+ + + R+ + + L + Sbjct: 130 LPGSHSLLRRNDPIP----EKEIEVIILEMVQTKRGPRIVVSRRALQDKKIEEFFSEKKV 185 Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDID 336 G + G V +++ G VEI EGV G + SE+ + + I P +V G + ++++D Sbjct: 186 GDIVEGTVKGISNAGVEVEISEGVRGFIPRSELSYDTR-ISPEDIVKPGQNITAKIIELD 244 Query: 337 EERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDI 396 +E++ + L LK+ +PW++ E + G V G++ SI FG F+ L+ G++GLV S++ Sbjct: 245 KEKKNVILSLKRLMPDPWEKVEEKYPVGKVVNGEVISIHPFGFFVRLEPGVEGLVPRSEV 304 Query: 397 SWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTG 456 W + GD + V+ VD E +++L K+ DP+ N +VTG Sbjct: 305 FWGNTRKSLEEVVSAGDLVKVEVINVDKENRKLTLSYKKAKGDPWENIEDRYNVNNVVTG 364 Query: 457 KVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAIS 516 KVT + +GA VEL +GVEG++ SE S R+++ +L +G++V+ K +D++NR I+ Sbjct: 365 KVTGIIKQGAFVELEEGVEGFVPVSEISWKRIDEPGEILKIGEKVKVKILKIDKENRKIT 424 Query: 517 LSVRAKDE 524 LS++ E Sbjct: 425 LSIKRTQE 432 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 90/343 (26%), Positives = 167/343 (48%), Gaps = 26/343 (7%) Query: 187 ENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEITVKV 245 E + G VKG+V D G VD GG +G + + ++ +K E VG+ +T+++ Sbjct: 17 EEFRRGQIVKGVVIGKEDDGVVVDFGGKSEGFVPVNEL----IKSLDE-YKVGENLTLQI 71 Query: 246 LKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVH 305 L + E + + + + K Y E + RV + T G V ++ V + Sbjct: 72 LNLNYEERSILSERRPVLRKTLEELRKDYEEKKPVKARVVSQTKGGYNVLLKGVVSAFLP 131 Query: 306 VSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERR--RISLGLKQCKANPWQQFAETHNK 363 S + P K +EV++L++ + +R RI + + + ++F Sbjct: 132 GSHSLLRRNDPIPEK------EIEVIILEMVQTKRGPRIVVSRRALQDKKIEEFFSEKKV 185 Query: 364 GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWN--VAGEEAVREYKKGDEIAAVVLQ 421 GD VEG +K I++ G+ + + G+ G + S++S++ ++ E+ V K G I A +++ Sbjct: 186 GDIVEGTVKGISNAGVEVEISEGVRGFIPRSELSYDTRISPEDIV---KPGQNITAKIIE 242 Query: 422 VDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRAS 481 +D E++ + L +K+L DP+ G +V G+V ++ G V L GVEG + S Sbjct: 243 LDKEKKNVILSLKRLMPDPWEKVEEKYPVGKVVNGEVISIHPFGFFVRLEPGVEGLVPRS 302 Query: 482 EA----SRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 E +R +E+ V+S GD V+ + VD++NR ++LS + Sbjct: 303 EVFWGNTRKSLEE---VVSAGDLVKVEVINVDKENRKLTLSYK 342 >UniRef50_B1C7U3 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C7U3_9FIRM Length = 666 Score = 220 bits (560), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 128/367 (34%), Positives = 213/367 (58%), Gaps = 13/367 (3%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQF-KNAQGE 59 M +SF + EES+KEI R G IV G +V +D + V ++ G KS+ + F + + Sbjct: 277 MVDSFEKNIEESIKEI--REGDIVEGEIVMVDHNEVTMNIGYKSDGIVKKADFLYDLMED 334 Query: 60 LEIQV--GDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVK 117 L + GD+V V + + DG G LS+ K A ++ ++ ETV I VK Sbjct: 335 LTSKAAKGDKVKVMVMKMNDGTGNVSLSKIKVDELGALDEAKEKFDSKETVKAKITKVVK 394 Query: 118 GGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIE-- 175 GG V+L I+AF+P S DVR ++D L GKE+E ++++ D+++N ++VSR+ ++E Sbjct: 395 GGLIVDLGFIKAFMPASYYDVRFIKDFDSLLGKEIECRIVEFDKQKNKIIVSRKILLEEA 454 Query: 176 -SENSAERDQLLEN----LQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKH 230 E A+ +L E L+ G EV+ +KN+T++G F+DL GVDG +HI+D+AWKRV + Sbjct: 455 YKERKAKEKELKEAAIAALEIGKEVEAPIKNITNFGMFIDLNGVDGFIHISDIAWKRVGN 514 Query: 231 PSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDY 290 +++ VGD + V + D++ +V L +K L ++PW + Y G + + N T++ Sbjct: 515 INDLYKVGDSVKAIVTELDKDNYKVKLSVKDLTKEPWQEFIENYSVGQTVKATIKNTTNF 574 Query: 291 GCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCK 350 G F EI VEGL+H+S++ N + V GD V V ++DI++++R++SL +K+ Sbjct: 575 GAFAEIIPDVEGLIHISQLSHDRVN-NVEDAVKTGDEVNVKIIDINKDKRKVSLSIKETM 633 Query: 351 ANPWQQF 357 P ++ Sbjct: 634 DPPKRKI 640 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 55/158 (34%), Positives = 89/158 (56%), Gaps = 4/158 (2%) Query: 364 GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVRE-YKKGDEIAAVVLQV 422 G VE IK+IT+FG+FI L+G +DG +H+SDI+W G + + YK GD + A+V ++ Sbjct: 476 GKEVEAPIKNITNFGMFIDLNG-VDGFIHISDIAWKRVGN--INDLYKVGDSVKAIVTEL 532 Query: 423 DAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASE 482 D + ++ L VK L ++P+ ++ G V + GA E+ VEG + S+ Sbjct: 533 DKDNYKVKLSVKDLTKEPWQEFIENYSVGQTVKATIKNTTNFGAFAEIIPDVEGLIHISQ 592 Query: 483 ASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 S DRV + + GDEV K +++ R +SLS++ Sbjct: 593 LSHDRVNNVEDAVKTGDEVNVKIIDINKDKRKVSLSIK 630 >UniRef50_A9BGS2 RNA binding S1 domain protein n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BGS2_PETMO Length = 532 Score = 220 bits (560), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 171/525 (32%), Positives = 282/525 (53%), Gaps = 45/525 (8%) Query: 3 ESFAQLFEESLKEI-ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE 61 ++F +L E +EI E + G I+ G V I+ D + V A + + Q + + E Sbjct: 5 KTFEKLLNE--QEINEVKKGKIIEGKVFEINSDGIWV-ALEGATGDVFVSQVELIKPLQE 61 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 QV ++ V + D G S ++A +E T+ K E E + ++K G++ Sbjct: 62 YQVDQKILVEITKTNDAEGLNFASEKRAVWNE---TMNKINE-GENYPIIFKNRLKKGYS 117 Query: 122 VELNG-IRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 V + G I AFLPGSL + P D L E KVI + K N+VVS + E + S Sbjct: 118 VLIEGLIGAFLPGSLSLLSPKDD---LPQGEKMAKVISKNGK--NIVVSIKDYAEEKIS- 171 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGD 239 Q +EGM + G+V+++ ++GAFV L ++GL+ ++++W + + VG Sbjct: 172 ---QTFNEYEEGMVIDGVVEDIKNFGAFVRLNDHLNGLIPASEVSWDEKISIKDYLKVGQ 228 Query: 240 EITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEG 299 ++ ++K DRE+ R+SL LK+L E+PW + ++YP G+ + G VT + +G V+I+EG Sbjct: 229 KVKALIIKLDREKKRISLSLKRLKENPWKTVDEKYPIGSIVQGTVTKILPFGFTVKIDEG 288 Query: 300 VEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAE 359 +EGLVH +E+ W K S +VNVGD V+V +L+ID+E ++I+L KQ +PW+ E Sbjct: 289 LEGLVHETEIFWGRKG-RISDLVNVGDDVQVKILNIDKENKKINLSYKQVSGDPWENIEE 347 Query: 360 THNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVV 419 + +G+ V G ++ + D G I +D GI G +H+S++SW+ D+I+ V+ Sbjct: 348 KYYEGNIVTGTVEKVLDNGAIIKIDEGITGFLHVSELSWDFV-----------DDISTVL 396 Query: 420 ----------LQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVE 469 +++D + +R+ L V++ E+P+ K G V GK+ KGA V Sbjct: 397 NEKQKIKVKIIKIDKDNKRMRLSVRETKENPWKKASKEIKPGDTVKGKIIRFLDKGAIV- 455 Query: 470 LADG--VEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKN 512 L DG VE YL AS+AS + + S+GD++EAK + +N Sbjct: 456 LIDGYEVEAYLPASKASTNS-KSLEETYSIGDQIEAKVLEIGLEN 499 Score = 148 bits (373), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 129/438 (29%), Positives = 218/438 (49%), Gaps = 16/438 (3%) Query: 97 TLEKAYEDAETVTGVINGKVKGGFTVELN--GIRAFLPGSLVDV--RPVRDTLHLEGKEL 152 T EK + E + V GK+ G E+N GI L G+ DV V L+ ++ Sbjct: 6 TFEKLLNEQE-INEVKKGKIIEGKVFEINSDGIWVALEGATGDVFVSQVELIKPLQEYQV 64 Query: 153 EFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG 212 + K++ K N+ + SE A ++ + + EG I KN G V + Sbjct: 65 DQKILVEITKTND---AEGLNFASEKRAVWNETMNKINEGENYPIIFKNRLKKGYSVLIE 121 Query: 213 GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAK 272 G+ G ++ + P + + G+++ KV+ + + VS+ K E+ Sbjct: 122 GLIGAFLPGSLS---LLSPKDDLPQGEKMA-KVISKNGKNIVVSI--KDYAEEKISQTFN 175 Query: 273 RYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMV 332 Y EG + G V ++ ++G FV + + + GL+ SE+ W K I + VG V+ ++ Sbjct: 176 EYEEGMVIDGVVEDIKNFGAFVRLNDHLNGLIPASEVSWDEK-ISIKDYLKVGQKVKALI 234 Query: 333 LDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVH 392 + +D E++RISL LK+ K NPW+ E + G V+G + I FG + +D G++GLVH Sbjct: 235 IKLDREKKRISLSLKRLKENPWKTVDEKYPIGSIVQGTVTKILPFGFTVKIDEGLEGLVH 294 Query: 393 LSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGA 452 ++I W G + GD++ +L +D E ++I+L KQ++ DP+ N +G Sbjct: 295 ETEIFWGRKGRIS-DLVNVGDDVQVKILNIDKENKKINLSYKQVSGDPWENIEEKYYEGN 353 Query: 453 IVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKN 512 IVTG V V GA +++ +G+ G+L SE S D V+D + VL+ +++ K +D+ N Sbjct: 354 IVTGTVEKVLDNGAIIKIDEGITGFLHVSELSWDFVDDISTVLNEKQKIKVKIIKIDKDN 413 Query: 513 RAISLSVRAKDEADEKDA 530 + + LSVR E K A Sbjct: 414 KRMRLSVRETKENPWKKA 431 Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 104/332 (31%), Positives = 182/332 (54%), Gaps = 14/332 (4%) Query: 102 YEDAETVTGVINGKVKGGFTVELN-GIRAFLPGSLV---DVRPVRDTLHLEGKELEFKVI 157 YE+ + GV+ G V LN + +P S V + ++D L + G++++ +I Sbjct: 177 YEEGMVIDGVVEDIKNFGAFVRLNDHLNGLIPASEVSWDEKISIKDYLKV-GQKVKALII 235 Query: 158 KLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDG 216 KLD+++ + +S + + E+ + E G V+G V + +G V + G++G Sbjct: 236 KLDREKKRISLSLKRLKENPWKT----VDEKYPIGSIVQGTVTKILPFGFTVKIDEGLEG 291 Query: 217 LLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPE 276 L+H T++ W R S++VNVGD++ VK+L D+E +++L KQ+ DPW I ++Y E Sbjct: 292 LVHETEIFWGRKGRISDLVNVGDDVQVKILNIDKENKKINLSYKQVSGDPWENIEEKYYE 351 Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDID 336 G +TG V + D G ++I+EG+ G +HVSE+ W + S V+N ++V ++ ID Sbjct: 352 GNIVTGTVEKVLDNGAIIKIDEGITGFLHVSELSWDFVD-DISTVLNEKQKIKVKIIKID 410 Query: 337 EERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGG-IDGLVHLSD 395 ++ +R+ L +++ K NPW++ ++ GD V+GKI D G + +DG ++ + S Sbjct: 411 KDNKRMRLSVRETKENPWKKASKEIKPGDTVKGKIIRFLDKGAIVLIDGYEVEAYLPASK 470 Query: 396 ISWNVAGEEAVREYKKGDEIAAVVLQVDAERE 427 S N E Y GD+I A VL++ E E Sbjct: 471 ASTNSKSLEET--YSIGDQIEAKVLEIGLENE 500 >UniRef50_C8WX93 RNA binding S1 domain protein n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WX93_ALIAD Length = 385 Score = 218 bits (556), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 129/343 (37%), Positives = 199/343 (58%), Gaps = 7/343 (2%) Query: 9 FEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE---IQVG 65 E L + R G +V G V A+D V V E I ++ G + VG Sbjct: 5 LREMLTDAAVREGDVVTGEVTAVDDHGVTVALPHGYEGHISPQELSAVPGTHPSDVVSVG 64 Query: 66 DEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN 125 V + V+ G LS+ +A++ AW +++ E E + I VKGG ++ Sbjct: 65 STVTAQVLKVDMESGHVTLSKRRAEQASAWERMQQLLESGEPIEVEIRDVVKGGLVADV- 123 Query: 126 GIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQL 185 G+RAF+P SLVD V + +G++L KVI++D ++N +++SRRAV+E E+ A +L Sbjct: 124 GVRAFIPASLVDRHFVENLEQFKGQKLRAKVIEVDPQKNKLILSRRAVLEEESEARARKL 183 Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKV 245 E L+ G ++G V+ LTD+GAFVD+GG DGL+HI+++++ V HPSE+V GD + V+V Sbjct: 184 FEELKPGDVIEGTVQRLTDFGAFVDVGGADGLVHISELSFSHVNHPSEVVREGDRVKVRV 243 Query: 246 LKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVH 305 L+ D E R+SL +K +PW A + G + G V + D+G FVE+ G+EGLVH Sbjct: 244 LRVDPEAGRISLSIKAALPEPWETYAHEFQPGDVVQGVVRRVVDFGAFVELRPGLEGLVH 303 Query: 306 VSEMDWTNKNI-HPSKVVNVGDVVEVMVLDIDEERRRISLGLK 347 VS++ +N+++ PS V+ G V V VL +D ER+RISL ++ Sbjct: 304 VSQI--SNEHVDKPSDVLQPGQEVTVRVLSVDPERKRISLSMR 344 Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 102/316 (32%), Positives = 172/316 (54%), Gaps = 23/316 (7%) Query: 123 ELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 EL+ + P +V V G + +V+K+D + +V +S+R E ++ ER Sbjct: 48 ELSAVPGTHPSDVVSV----------GSTVTAQVLKVDMESGHVTLSKRRA-EQASAWER 96 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 Q L E +EV+ ++++ G D+G V + + + V++ + G ++ Sbjct: 97 MQQLLESGEPIEVE--IRDVVKGGLVADVG-VRAFIPASLVDRHFVENLEQFK--GQKLR 151 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPE----GTKLTGRVTNLTDYGCFVEIEE 298 KV++ D ++ ++ L + + E+ A A++ E G + G V LTD+G FV++ Sbjct: 152 AKVIEVDPQKNKLILSRRAVLEEESEARARKLFEELKPGDVIEGTVQRLTDFGAFVDVG- 210 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFA 358 G +GLVH+SE+ +++ N HPS+VV GD V+V VL +D E RISL +K PW+ +A Sbjct: 211 GADGLVHISELSFSHVN-HPSEVVREGDRVKVRVLRVDPEAGRISLSIKAALPEPWETYA 269 Query: 359 ETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAV 418 GD V+G ++ + DFG F+ L G++GLVH+S IS N ++ + G E+ Sbjct: 270 HEFQPGDVVQGVVRRVVDFGAFVELRPGLEGLVHVSQIS-NEHVDKPSDVLQPGQEVTVR 328 Query: 419 VLQVDAERERISLGVK 434 VL VD ER+RISL ++ Sbjct: 329 VLSVDPERKRISLSMR 344 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 104/342 (30%), Positives = 175/342 (51%), Gaps = 21/342 (6%) Query: 189 LQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLK 247 ++EG V G V + D+G V L G +G + +++ HPS++V+VG +T +VLK Sbjct: 14 VREGDVVTGEVTAVDDHGVTVALPHGYEGHISPQELSAVPGTHPSDVVSVGSTVTAQVLK 73 Query: 248 FDRERTRVSLGLKQLGE-DPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHV 306 D E V+L ++ + W + + G + + ++ G ++ GV + Sbjct: 74 VDMESGHVTLSKRRAEQASAWERMQQLLESGEPIEVEIRDVVKGGLVADV--GVRAFIPA 131 Query: 307 SEMDWTN-KNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLK-----QCKANPWQQFAET 360 S +D +N+ K G + V+++D ++ ++ L + + +A + F E Sbjct: 132 SLVDRHFVENLEQFK----GQKLRAKVIEVDPQKNKLILSRRAVLEEESEARARKLFEEL 187 Query: 361 HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGE--EAVREYKKGDEIAAV 418 GD +EG ++ +TDFG F+ + GG DGLVH+S++S++ E VRE GD + Sbjct: 188 -KPGDVIEGTVQRLTDFGAFVDV-GGADGLVHISELSFSHVNHPSEVVRE---GDRVKVR 242 Query: 419 VLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYL 478 VL+VD E RISL +K +P+ + + G +V G V V GA VEL G+EG + Sbjct: 243 VLRVDPEAGRISLSIKAALPEPWETYAHEFQPGDVVQGVVRRVVDFGAFVELRPGLEGLV 302 Query: 479 RASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 S+ S + V+ + VL G EV + VD + + ISLS+R Sbjct: 303 HVSQISNEHVDKPSDVLQPGQEVTVRVLSVDPERKRISLSMR 344 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 69/252 (27%), Positives = 125/252 (49%), Gaps = 14/252 (5%) Query: 276 EGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTN-KNIHPSKVVNVGDVVEVMVLD 334 EG +TG VT + D+G V + G EG H+S + + HPS VV+VG V VL Sbjct: 16 EGDVVTGEVTAVDDHGVTVALPHGYEG--HISPQELSAVPGTHPSDVVSVGSTVTAQVLK 73 Query: 335 IDEERRRISLGLKQC-KANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHL 393 +D E ++L ++ +A+ W++ + G+ +E +I+ + G+ D G+ + Sbjct: 74 VDMESGHVTLSKRRAEQASAWERMQQLLESGEPIEVEIRDVVKGGLVA--DVGVRAFIPA 131 Query: 394 SDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPF----NNWVALNK 449 S + + E + ++K G ++ A V++VD ++ ++ L + + E+ K Sbjct: 132 SLVDRHFV--ENLEQFK-GQKLRAKVIEVDPQKNKLILSRRAVLEEESEARARKLFEELK 188 Query: 450 KGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVD 509 G ++ G V + GA V++ G +G + SE S V + V+ GD V+ + VD Sbjct: 189 PGDVIEGTVQRLTDFGAFVDVG-GADGLVHISELSFSHVNHPSEVVREGDRVKVRVLRVD 247 Query: 510 RKNRAISLSVRA 521 + ISLS++A Sbjct: 248 PEAGRISLSIKA 259 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 30/77 (38%), Positives = 45/77 (58%) Query: 449 KKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGV 508 ++G +VTG+VTAVD G TV L G EG++ E S + V+SVG V A+ V Sbjct: 15 REGDVVTGEVTAVDDHGVTVALPHGYEGHISPQELSAVPGTHPSDVVSVGSTVTAQVLKV 74 Query: 509 DRKNRAISLSVRAKDEA 525 D ++ ++LS R ++A Sbjct: 75 DMESGHVTLSKRRAEQA 91 >UniRef50_UPI00016C0B56 30S ribosomal protein S1 n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0B56 Length = 373 Score = 216 bits (550), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 110/327 (33%), Positives = 194/327 (59%), Gaps = 2/327 (0%) Query: 21 GSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ-GELEIQVGDEVDVALDAVEDGF 79 G I + V ++++ + G +++ +P ++ N + + E+++GDE +V++ ++DG Sbjct: 31 GDIRKATVQVVEENGIXASIGYHTDAYLPWREYSNREFDKSEVKIGDEFNVSILRLDDGD 90 Query: 80 GETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVR 139 G L+S++K + +++ +EK +++ E VT + +KGG T + G+RAF+PGS + Sbjct: 91 GNVLISKKKVENEKSYDDIEKMFKNKEIVTVKLKDVIKGGLTTSIKGVRAFIPGSQITDT 150 Query: 140 PVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIV 199 V D GK ++ ++I+ ++ ++VS +A+ + +R L+ LQEG + G + Sbjct: 151 YVEDLHSYVGKSIDVQIIEFVPQKRKLIVSGKALAKQRRLEKRQARLDQLQEGEKYIGKI 210 Query: 200 KNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGL 259 L +YGAFVDL G++GL+H +D++W R+KHP +IV G E+ V ++ DRE +++L L Sbjct: 211 TKLMNYGAFVDLDGIEGLIHNSDLSWSRIKHPKDIVQEGQEVEVSIISIDRENGKIALAL 270 Query: 260 KQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPS 319 K + DPW EG + G VT +G FV I +GVEGL+H+S++ T + P Sbjct: 271 KDINNDPWENTVANLEEGQLVKGIVTRFALFGAFVRIADGVEGLIHISQIS-TPRPTKPQ 329 Query: 320 KVVNVGDVVEVMVLDIDEERRRISLGL 346 V+ G VEV ++ ID+ +RISL L Sbjct: 330 DVLTSGQEVEVKIIKIDKAEKRISLSL 356 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 91/301 (30%), Positives = 157/301 (52%), Gaps = 18/301 (5%) Query: 235 VNVGDEITVKVLKFDRERTRVSLGLKQL-GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCF 293 V +GDE V +L+ D V + K++ E + I K + +T ++ ++ G Sbjct: 73 VKIGDEFNVSILRLDDGDGNVLISKKKVENEKSYDDIEKMFKNKEIVTVKLKDVIKGGLT 132 Query: 294 VEIEEGVEGLVHVSEM-DWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLG----LKQ 348 I+ GV + S++ D +++H VG ++V +++ ++R++ + KQ Sbjct: 133 TSIK-GVRAFIPGSQITDTYVEDLHSY----VGKSIDVQIIEFVPQKRKLIVSGKALAKQ 187 Query: 349 CKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWN--VAGEEAV 406 + Q + +G++ GKI + ++G F+ LDG I+GL+H SD+SW+ ++ V Sbjct: 188 RRLEKRQARLDQLQEGEKYIGKITKLMNYGAFVDLDG-IEGLIHNSDLSWSRIKHPKDIV 246 Query: 407 REYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGA 466 +E G E+ ++ +D E +I+L +K + DP+ N VA ++G +V G VT GA Sbjct: 247 QE---GQEVEVSIISIDRENGKIALALKDINNDPWENTVANLEEGQLVKGIVTRFALFGA 303 Query: 467 TVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLS-VRAKDEA 525 V +ADGVEG + S+ S R VL+ G EVE K +D+ + ISLS + A DE Sbjct: 304 FVRIADGVEGLIHISQISTPRPTKPQDVLTSGQEVEVKIIKIDKAEKRISLSLIAALDEI 363 Query: 526 D 526 D Sbjct: 364 D 364 >UniRef50_B0MQU3 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B0MQU3_9FIRM Length = 658 Score = 215 bits (547), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 122/333 (36%), Positives = 194/333 (58%), Gaps = 4/333 (1%) Query: 21 GSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK---NAQGELEIQVGDEVDVALDAVED 77 G+ V+ +VVA++K+ +VD G K IPA + NA ++VGDE++ + AV D Sbjct: 312 GNRVKALVVAVNKNEAVVDLGTKHSGYIPASELSQDPNAAPSDVVKVGDEIEAIVTAVND 371 Query: 78 GFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVD 137 G LS++K L A E+ ET+ G ++ VKGG + NG R F+P S Sbjct: 372 AEGTVTLSKKKVDSVLGVEKLAAAMENNETLEGEVSSVVKGGVIIISNGTRVFIPASQTG 431 Query: 138 VRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKG 197 V L K + FKVI++ + R VV S R + N A + + EN++ G + G Sbjct: 432 VPKDGKLEELLKKTVPFKVIEVTEARGRVVGSIRQAKKEANDAAKAKFWENIEVGQKFTG 491 Query: 198 IVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSL 257 VK++ YG FVDLGGVDG++H +++ W R+KHP EIV +GD++ V V FD E+ RVSL Sbjct: 492 EVKSIESYGVFVDLGGVDGMVHSSELTWNRIKHPREIVKIGDKLDVYVKSFDPEKKRVSL 551 Query: 258 GLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIH 317 G K+ ++PW Y EG + + ++T +G F +I GV+GL+H+S++ N + Sbjct: 552 GCKKEEDNPWNKFVAEYSEGDVVDVTIVSITPFGAFAQIIPGVDGLIHISQISTERIN-N 610 Query: 318 PSKVVNVGDVVEVMVLDIDEERRRISLGLKQCK 350 ++V+++GD V+ +++I+EE+ R+SL ++ K Sbjct: 611 VAQVLSIGDEVKAKIIEINEEQNRVSLSIRALK 643 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 104/349 (29%), Positives = 179/349 (51%), Gaps = 14/349 (4%) Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSEIVNVG 238 AE D+ + + G VK +V + A VDLG G + ++++ PS++V VG Sbjct: 300 AEVDKTFKKVYIGNRVKALVVAVNKNEAVVDLGTKHSGYIPASELSQDPNAAPSDVVKVG 359 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWV-AIAKRYPEGTKLTGRVTNLTDYGCFVEIE 297 DEI V + V+L K++ V +A L G V+++ G + I Sbjct: 360 DEIEAIVTAVNDAEGTVTLSKKKVDSVLGVEKLAAAMENNETLEGEVSSVVKGGVII-IS 418 Query: 298 EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCK--AN--P 353 G + S+ K+ +++ V V+++ E R R+ ++Q K AN Sbjct: 419 NGTRVFIPASQTG-VPKDGKLEELLK--KTVPFKVIEVTEARGRVVGSIRQAKKEANDAA 475 Query: 354 WQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKK-G 412 +F E G + G++KSI +G+F+ L GG+DG+VH S+++WN RE K G Sbjct: 476 KAKFWENIEVGQKFTGEVKSIESYGVFVDL-GGVDGMVHSSELTWNRIKHP--REIVKIG 532 Query: 413 DEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELAD 472 D++ V D E++R+SLG K+ ++P+N +VA +G +V + ++ GA ++ Sbjct: 533 DKLDVYVKSFDPEKKRVSLGCKKEEDNPWNKFVAEYSEGDVVDVTIVSITPFGAFAQIIP 592 Query: 473 GVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRA 521 GV+G + S+ S +R+ + VLS+GDEV+AK ++ + +SLS+RA Sbjct: 593 GVDGLIHISQISTERINNVAQVLSIGDEVKAKIIEINEEQNRVSLSIRA 641 >UniRef50_A4IQA6 30S ribosomal protein S1 n=10 Tax=Bacillaceae RepID=A4IQA6_GEOTN Length = 387 Score = 214 bits (546), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 135/350 (38%), Positives = 201/350 (57%), Gaps = 16/350 (4%) Query: 23 IVRGVVVAIDKDVVLVDA-GLKSESAIPAEQFKNAQGELE---IQVGDEVDVALDAVEDG 78 IVRG VV ++ VLV+ K IP + N E + VGDEV + VE+G Sbjct: 17 IVRGKVVKLEDKQVLVEVENSKQSGIIPISELSNLHIEKPSDAVAVGDEVTAKVKKVEEG 76 Query: 79 F----GETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGS 134 G +LS++ AW LE+ + ET V+ VKGG ++ G+R F+P S Sbjct: 77 KDGEEGLLILSKKAVDAERAWEELERKFASGETFETVVKDIVKGGLVADV-GVRGFIPAS 135 Query: 135 LVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGME 194 LV+ V D +GK L KV++LD+++N V++S RAV+E E ++ +LL L+ G Sbjct: 136 LVEPHYVEDFSDYKGKTLTVKVVELDREKNRVILSHRAVVEEEQERQQKELLSRLEAGQV 195 Query: 195 VKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTR 254 + G+V+ + D+G FVD+GG DGL+HI+ ++ RV HPSE+V GD + VKVL D E+ R Sbjct: 196 LDGVVRRIADFGVFVDVGGFDGLVHISQLSHTRVAHPSEVVKEGDAVKVKVLAVDPEQGR 255 Query: 255 VSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNK 314 +SL +K+ PW I+++ +TG V L +G FVEI GVEGLVHVS++ N+ Sbjct: 256 LSLSIKEALPGPWEGISEKVKPSDVVTGTVKRLASFGAFVEIFPGVEGLVHVSQI--ANR 313 Query: 315 NI-HPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC----KANPWQQFAE 359 I P +V+ GD V+ VLD++E RISL ++ A P + +++ Sbjct: 314 RIGSPHEVLKEGDEVKAKVLDVNEAEHRISLSIRALLEEETAAPAEDYSQ 363 Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 110/348 (31%), Positives = 177/348 (50%), Gaps = 32/348 (9%) Query: 103 EDAETVTGVINGKVKGGFTV-ELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQ 161 ED + + V N K G + EL+ + P V V G E+ KV K+++ Sbjct: 26 EDKQVLVEVENSKQSGIIPISELSNLHIEKPSDAVAV----------GDEVTAKVKKVEE 75 Query: 162 KRNN----VVVSRRAVIESENSAER--DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVD 215 ++ +++S++AV AER ++L G + +VK++ G D+G V Sbjct: 76 GKDGEEGLLILSKKAV-----DAERAWEELERKFASGETFETVVKDIVKGGLVADVG-VR 129 Query: 216 GLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQL----GEDPWVAIA 271 G + + + V+ S+ G +TVKV++ DRE+ RV L + + E + Sbjct: 130 GFIPASLVEPHYVEDFSDYK--GKTLTVKVVELDREKNRVILSHRAVVEEEQERQQKELL 187 Query: 272 KRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVM 331 R G L G V + D+G FV++ G +GLVH+S++ T + HPS+VV GD V+V Sbjct: 188 SRLEAGQVLDGVVRRIADFGVFVDVG-GFDGLVHISQLSHT-RVAHPSEVVKEGDAVKVK 245 Query: 332 VLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLV 391 VL +D E+ R+SL +K+ PW+ +E D V G +K + FG F+ + G++GLV Sbjct: 246 VLAVDPEQGRLSLSIKEALPGPWEGISEKVKPSDVVTGTVKRLASFGAFVEIFPGVEGLV 305 Query: 392 HLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAED 439 H+S I+ G K+GDE+ A VL V+ RISL ++ L E+ Sbjct: 306 HVSQIANRRIGSPH-EVLKEGDEVKAKVLDVNEAEHRISLSIRALLEE 352 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 103/343 (30%), Positives = 166/343 (48%), Gaps = 28/343 (8%) Query: 195 VKGIVKNLTDYGAFVDL--GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKF---- 248 V+G V L D V++ G++ I++++ ++ PS+ V VGDE+T KV K Sbjct: 18 VRGKVVKLEDKQVLVEVENSKQSGIIPISELSNLHIEKPSDAVAVGDEVTAKVKKVEEGK 77 Query: 249 DRERTRVSLGLKQL-GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVS 307 D E + L K + E W + +++ G V ++ G ++ GV G + S Sbjct: 78 DGEEGLLILSKKAVDAERAWEELERKFASGETFETVVKDIVKGGLVADV--GVRGFIPAS 135 Query: 308 EMDWTNKNIHPSKVVNVGD----VVEVMVLDIDEERRRISLGLKQC----KANPWQQFAE 359 + P V + D + V V+++D E+ R+ L + + ++ Sbjct: 136 -------LVEPHYVEDFSDYKGKTLTVKVVELDREKNRVILSHRAVVEEEQERQQKELLS 188 Query: 360 THNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWN-VAGEEAVREYKKGDEIAAV 418 G ++G ++ I DFG+F+ + GG DGLVH+S +S VA V K+GD + Sbjct: 189 RLEAGQVLDGVVRRIADFGVFVDV-GGFDGLVHISQLSHTRVAHPSEV--VKEGDAVKVK 245 Query: 419 VLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYL 478 VL VD E+ R+SL +K+ P+ K +VTG V + + GA VE+ GVEG + Sbjct: 246 VLAVDPEQGRLSLSIKEALPGPWEGISEKVKPSDVVTGTVKRLASFGAFVEIFPGVEGLV 305 Query: 479 RASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRA 521 S+ + R+ VL GDEV+AK V+ ISLS+RA Sbjct: 306 HVSQIANRRIGSPHEVLKEGDEVKAKVLDVNEAEHRISLSIRA 348 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 42/135 (31%), Positives = 76/135 (56%), Gaps = 5/135 (3%) Query: 148 EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGA 207 EG ++ KV+ +D ++ + +S I+ + + E ++ V G VK L +GA Sbjct: 238 EGDAVKVKVLAVDPEQGRLSLS----IKEALPGPWEGISEKVKPSDVVTGTVKRLASFGA 293 Query: 208 FVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDP 266 FV++ GV+GL+H++ +A +R+ P E++ GDE+ KVL + R+SL ++ L E+ Sbjct: 294 FVEIFPGVEGLVHVSQIANRRIGSPHEVLKEGDEVKAKVLDVNEAEHRISLSIRALLEEE 353 Query: 267 WVAIAKRYPEGTKLT 281 A A+ Y + TK+ Sbjct: 354 TAAPAEDYSQYTKVA 368 >UniRef50_O67462 Ribosomal protein S01 n=2 Tax=Aquificaceae RepID=O67462_AQUAE Length = 535 Score = 213 bits (543), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 170/524 (32%), Positives = 270/524 (51%), Gaps = 35/524 (6%) Query: 5 FAQLFEESLKEIET-RPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQ 63 F +L EES+ E + G +V+G VV + D V VD G K+E+ I E+ E+Q Sbjct: 4 FEKLLEESIASPEEFKRGQVVKGRVVKVAGDTVFVDIGYKTEAVISKEEVP------EVQ 57 Query: 64 VGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVE 123 G E++ L +LS + + + L++AY + V G I KVKGGF V+ Sbjct: 58 EGQEIEAVLVRFSPRIPNPVLSVKPLQEKKELEKLKEAYLNKSDVVGKIEKKVKGGFIVD 117 Query: 124 LNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVI--KLDQKRNNVVVSRRAVIESENSAE 181 G++AFLP S + EG+ L FKV+ KLD KR ++VS +A ++ + Sbjct: 118 FEGVKAFLPMSQAGKK------LKEGQVLTFKVLDFKLDSKRPQIIVSHKAYLDEQREKR 171 Query: 182 RDQLLENLQEGMEVKG-IVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSEIVNVGD 239 + +LL L+ G V+G +VK + G + + GV L +++W R K+P +VG+ Sbjct: 172 KQELLNTLKPGDVVEGKVVKIDPNKGVTLVIEGVLRAFLPKEELSWGRDKNPYNYTDVGE 231 Query: 240 EITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEG 299 + VKV + D+++ + + L++L +PW K + EG + GRV +T G VE+ EG Sbjct: 232 TLKVKVKRVDKQKGFIIVSLRELKGNPWEKFLKEHKEGDVIEGRVVAVTPKGVVVEVMEG 291 Query: 300 VEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAE 359 VEG V E+ W K P GD+V+ ++ ID +RRR+ L +K+ + PW+ F + Sbjct: 292 VEGFVPEEELAWEGK---PE--FKKGDLVKAKIMKIDPKRRRLILSIKRAQPRPWEIFLQ 346 Query: 360 THNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAG--EEAVREYKKGDEIAA 417 H G +V+GK+ I + L+ G+ G++H SD+SW EE ++E G+E Sbjct: 347 KHPVGSKVKGKVIKIEGSRAIVELEDGVKGVIHRSDLSWTRPKRVEEVLKE---GEEREF 403 Query: 418 VVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGY 477 VL ++ + + LG+KQL E+P+ K G +V V + GA +E +GVEG Sbjct: 404 AVLGLEG--KYVKLGLKQLTENPWEKVKEKYKVGDVVKLPVKELAPFGAFLEFPEGVEGL 461 Query: 478 LRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRA 521 L SE R + + G E E K ++ K I+ S+ A Sbjct: 462 LPFSEVPRH------IRIRKGQEYEVKIIDINPKEGKITFSINA 499 >UniRef50_B5YEY5 Ribosomal protein S1, putative n=2 Tax=Dictyoglomus RepID=B5YEY5_DICT6 Length = 552 Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 141/508 (27%), Positives = 267/508 (52%), Gaps = 17/508 (3%) Query: 22 SIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEI--QVGDEVDVALDAVEDGF 79 ++V G ++ I KD + +D G K ++ +P + Q D + V + V Sbjct: 20 TLVYGNILNITKDGLWLDIGKKYDAFLPYNELSKELKAKLEKKQEIDSIPVVIKHVNYKD 79 Query: 80 GETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNG-IRAFLPGSLVDV 138 G +S +KA ++ W L AYE+ + + G + GF +E+N + F+P +DV Sbjct: 80 GVITVSNKKAVENKIWEELLWAYENNQPIQGKVINYNGRGFILEINNEVEGFIPAKEIDV 139 Query: 139 RPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGI 198 P++ + + +E K+ +++ ++N +++S R ++E + ER L E ++ V+G Sbjct: 140 PPIKPPKYYINRRIEGKIKRINPEKNQLIISARELLEQKQEEERSNLWEKIKNSQIVRGR 199 Query: 199 VKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSL 257 + + + VDLG G+ G++ +++W +K+ N GD + +VL D L Sbjct: 200 IIKVDEDKLTVDLGLGIIGIVEKDEISWFPIKNIRRYYNTGDIVKARVLSLDENSRTAQL 259 Query: 258 GLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIH 317 +KQ +PW ++YPEG+ + + ++ G V+++ + G V +SE+ W Sbjct: 260 SIKQAQPNPWSLFKEKYPEGSIIKAEIIKISG-GIVVKVDNLI-GYVPMSEISWG----R 313 Query: 318 PSKVVN---VGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSI 374 P V N VGD V+ VL +D+ ++I L +KQ + NPW+ + + G+ V GK+ +I Sbjct: 314 PQDVKNSLKVGDKVKAKVLSVDDLNQKIFLSIKQVEPNPWEVIDQNYKIGEIVSGKVTNI 373 Query: 375 TDFGIFIGLDGGIDGLVHLSDISW-NVAGEEAVREYKKGDEIAAVVLQVDAERERISLGV 433 TDFGIFI + G++GL+ ISW ++ + +K GD I A ++++D E ++++L Sbjct: 374 TDFGIFIEIKPGLEGLIPRKLISWERISNISDI--FKPGDFIEAKIIEIDKENKKLTLSR 431 Query: 434 KQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATL 493 + L +DP+ + ++G + G++ G VEL G+EG+L ++ + ++ E+ Sbjct: 432 RDLLKDPWEDIDEKYREGQNIKGRIIEKLKDGYIVELEPGIEGFLPYTQINFEK-ENEIQ 490 Query: 494 VLSVGDEVEAKFTGVDRKNRAISLSVRA 521 +EVEAK ++ + R I+LS++A Sbjct: 491 GFKENEEVEAKIVKINPRFRRITLSIKA 518 Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 67/235 (28%), Positives = 133/235 (56%), Gaps = 5/235 (2%) Query: 206 GAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGED 265 G V + + G + +++++W R + + VGD++ KVL D ++ L +KQ+ + Sbjct: 292 GIVVKVDNLIGYVPMSEISWGRPQDVKNSLKVGDKVKAKVLSVDDLNQKIFLSIKQVEPN 351 Query: 266 PWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTN-KNIHPSKVVNV 324 PW I + Y G ++G+VTN+TD+G F+EI+ G+EGL+ + W NI S + Sbjct: 352 PWEVIDQNYKIGEIVSGKVTNITDFGIFIEIKPGLEGLIPRKLISWERISNI--SDIFKP 409 Query: 325 GDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLD 384 GD +E +++ID+E ++++L + +PW+ E + +G ++G+I G + L+ Sbjct: 410 GDFIEAKIIEIDKENKKLTLSRRDLLKDPWEDIDEKYREGQNIKGRIIEKLKDGYIVELE 469 Query: 385 GGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAED 439 GI+G + + I N E ++ +K+ +E+ A +++++ RI+L +K L ++ Sbjct: 470 PGIEGFLPYTQI--NFEKENEIQGFKENEEVEAKIVKINPRFRRITLSIKALIKE 522 Score = 43.5 bits (101), Expect = 0.022, Method: Compositional matrix adjust. Identities = 45/192 (23%), Positives = 87/192 (45%), Gaps = 20/192 (10%) Query: 12 SLKEIETRP----------GSIVRGVVVAIDKDVVLVDA-----GLKSESAIPAEQFKNA 56 S+K++E P G IV G V I + ++ GL I E+ N Sbjct: 344 SIKQVEPNPWEVIDQNYKIGEIVSGKVTNITDFGIFIEIKPGLEGLIPRKLISWERISNI 403 Query: 57 QGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKV 116 + GD ++ + ++ + LSR + + W +++ Y + + + G I K+ Sbjct: 404 SDIF--KPGDFIEAKIIEIDKENKKLTLSRRDLLK-DPWEDIDEKYREGQNIKGRIIEKL 460 Query: 117 KGGFTVELN-GIRAFLPGSLVDVRPVRDTLHL-EGKELEFKVIKLDQKRNNVVVSRRAVI 174 K G+ VEL GI FLP + ++ + E +E+E K++K++ + + +S +A+I Sbjct: 461 KDGYIVELEPGIEGFLPYTQINFEKENEIQGFKENEEVEAKIVKINPRFRRITLSIKALI 520 Query: 175 ESENSAERDQLL 186 + + E + L Sbjct: 521 KEKLDQEMKKYL 532 >UniRef50_C4V2L6 Possible 30S ribosomal protein S1 n=2 Tax=Selenomonas RepID=C4V2L6_9FIRM Length = 370 Score = 213 bits (541), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 122/326 (37%), Positives = 196/326 (60%), Gaps = 11/326 (3%) Query: 33 KDVVLVDAGLKSESAIPAEQFKNAQGELE-----IQVGDEVDVALDAVEDGFGETLLSRE 87 +D VD G K E IP + A + ++VGDE+DV + ++ G +L S+ Sbjct: 28 RDEAYVDIGYKQE--IPVSKRDLAVPAPDDARDVVKVGDEIDVYIKSLGGDNGGSL-SKV 84 Query: 88 KAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHL 147 +A + AW +E E ETV + +VKGG + G+R F+P S +++ V+D Sbjct: 85 EADKMAAWKDIEVIKEKGETVEAKVAKEVKGGLVAYVMGLRGFIPASQMELHFVKDLSVY 144 Query: 148 EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGA 207 + +E ++I++D ++ +V+SRR ++E + + + + + ++ V+G VK L DYGA Sbjct: 145 VDQTVEAEIIEIDVQKRRLVLSRRKLLERDRAEKEEAVFSAIEPEQIVRGTVKRLVDYGA 204 Query: 208 FVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPW 267 F+D+GGVDGL HI+D+AW RVKHPSE++ VG E+ V V DR+ R+SL +K DPW Sbjct: 205 FIDIGGVDGLAHISDLAWHRVKHPSEVLEVGQELDVYVKSVDRDTKRISLSVKDTLPDPW 264 Query: 268 VAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPS-KVVNVGD 326 + A++Y EG + G++ LTD+G F+EIE G +GL+ + E+ K I + + V+ GD Sbjct: 265 IEKAEKYAEGDFIEGKIIKLTDFGAFMEIEPGFDGLIPMGEL--AEKRIERADEAVHTGD 322 Query: 327 VVEVMVLDIDEERRRISLGLKQCKAN 352 +V V VL ID +R+RISL + + K + Sbjct: 323 IVIVKVLRIDTKRKRISLSITKAKRD 348 Score = 117 bits (294), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 76/232 (32%), Positives = 128/232 (55%), Gaps = 11/232 (4%) Query: 213 GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQL-----GEDPW 267 G+ G + + M VK S V V + ++++ D ++ R+ L ++L E Sbjct: 123 GLRGFIPASQMELHFVKDLS--VYVDQTVEAEIIEIDVQKRRLVLSRRKLLERDRAEKEE 180 Query: 268 VAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDV 327 + PE + G V L DYG F++I GV+GL H+S++ W ++ HPS+V+ VG Sbjct: 181 AVFSAIEPEQI-VRGTVKRLVDYGAFIDIG-GVDGLAHISDLAW-HRVKHPSEVLEVGQE 237 Query: 328 VEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGI 387 ++V V +D + +RISL +K +PW + AE + +GD +EGKI +TDFG F+ ++ G Sbjct: 238 LDVYVKSVDRDTKRISLSVKDTLPDPWIEKAEKYAEGDFIEGKIIKLTDFGAFMEIEPGF 297 Query: 388 DGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAED 439 DGL+ + +++ E A GD + VL++D +R+RISL + + D Sbjct: 298 DGLIPMGELAEKRI-ERADEAVHTGDIVIVKVLRIDTKRKRISLSITKAKRD 348 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 78/247 (31%), Positives = 122/247 (49%), Gaps = 16/247 (6%) Query: 291 GCFVEIEEGVEGLVHVSEMDWTNKNIHPSK--VVNVGDVVEVMVLDIDEERRRISLG--- 345 G V G+ G + S+M+ +H K V V VE +++ID ++RR+ L Sbjct: 115 GGLVAYVMGLRGFIPASQME-----LHFVKDLSVYVDQTVEAEIIEIDVQKRRLVLSRRK 169 Query: 346 -LKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWN-VAGE 403 L++ +A + V G +K + D+G FI + GG+DGL H+SD++W+ V Sbjct: 170 LLERDRAEKEEAVFSAIEPEQIVRGTVKRLVDYGAFIDI-GGVDGLAHISDLAWHRVKHP 228 Query: 404 EAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDA 463 V E G E+ V VD + +RISL VK DP+ +G + GK+ + Sbjct: 229 SEVLEV--GQELDVYVKSVDRDTKRISLSVKDTLPDPWIEKAEKYAEGDFIEGKIIKLTD 286 Query: 464 KGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSV-RAK 522 GA +E+ G +G + E + R+E A + GD V K +D K + ISLS+ +AK Sbjct: 287 FGAFMEIEPGFDGLIPMGELAEKRIERADEAVHTGDIVIVKVLRIDTKRKRISLSITKAK 346 Query: 523 DEADEKD 529 +AD D Sbjct: 347 RDADSAD 353 >UniRef50_A9B766 RNA binding S1 domain protein n=6 Tax=Chloroflexi (class) RepID=A9B766_HERA2 Length = 397 Score = 209 bits (533), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 122/343 (35%), Positives = 195/343 (56%), Gaps = 15/343 (4%) Query: 19 RP--GSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL--EIQVGDEVDVALDA 74 RP G + G+V+ ++ +LVD G K E IP + + EL I+ GD + V + Sbjct: 25 RPERGQLREGIVMRVEDSQILVDIGAKHEGVIPNQDLRRLPPELVSGIKNGDTLQVYVME 84 Query: 75 VEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGS 134 E GE +LS + W + E+ + + + G KGG V++ +R F+P S Sbjct: 85 PESKEGELVLSLNMVQVERDWQEAQTMLENGQIIEAGVVGYNKGGLLVQVGRVRGFVPAS 144 Query: 135 -LVDVRPVRDT-------LHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLL 186 +V++ T + G+ + KVI++D+ RN +V+S RA ++ +++++LL Sbjct: 145 QVVNLHSRTGTEGQQSAMTKMVGQNIPLKVIEVDRDRNRLVLSERAAMQRWRQSQKERLL 204 Query: 187 ENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVL 246 E L+ G V G V LT +GAF+DLGG DGL HI++++W+RV HP E++ G E+ V VL Sbjct: 205 ETLEPGAVVTGRVNQLTPFGAFIDLGGADGLAHISELSWQRVNHPREVLQPGQEVQVYVL 264 Query: 247 KFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHV 306 + DR+R R+ L L++L DPW I +RY G + G VTN+ +G FV +EEGVEGL+H Sbjct: 265 EVDRDRERIGLSLRRLQPDPWATIDQRYDLGQLIVGEVTNIAPFGVFVRVEEGVEGLIHA 324 Query: 307 SEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC 349 SE+ +N + G V+V V+ +D +R+R+ L L++ Sbjct: 325 SEL---TENGQSPDSLQQGQQVQVKVISLDRQRQRLGLSLRRV 364 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 79/298 (26%), Positives = 158/298 (53%), Gaps = 18/298 (6%) Query: 149 GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAF 208 G L+ V++ + K +V+S V + E +LEN G ++ V G Sbjct: 75 GDTLQVYVMEPESKEGELVLSLNMVQVERDWQEAQTMLEN---GQIIEAGVVGYNKGGLL 131 Query: 209 VDLGGVDGLLHITDMAWKRVKHPSE------IVNVGDEITVKVLKFDRERTRVSL----G 258 V +G V G + + + + +E VG I +KV++ DR+R R+ L Sbjct: 132 VQVGRVRGFVPASQVVNLHSRTGTEGQQSAMTKMVGQNIPLKVIEVDRDRNRLVLSERAA 191 Query: 259 LKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHP 318 +++ + + + G +TGRV LT +G F+++ G +GL H+SE+ W N HP Sbjct: 192 MQRWRQSQKERLLETLEPGAVVTGRVNQLTPFGAFIDLG-GADGLAHISELSWQRVN-HP 249 Query: 319 SKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFG 378 +V+ G V+V VL++D +R RI L L++ + +PW + ++ G + G++ +I FG Sbjct: 250 REVLQPGQEVQVYVLEVDRDRERIGLSLRRLQPDPWATIDQRYDLGQLIVGEVTNIAPFG 309 Query: 379 IFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQL 436 +F+ ++ G++GL+H S+++ N +++++ ++ + V+ +D +R+R+ L ++++ Sbjct: 310 VFVRVEEGVEGLIHASELTENGQSPDSLQQGQQ---VQVKVISLDRQRQRLGLSLRRV 364 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 96/350 (27%), Positives = 168/350 (48%), Gaps = 39/350 (11%) Query: 196 KGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSEIVN---VGDEITVKVLKFDRE 251 +GIV + D VD+G +G++ D+ + P E+V+ GD + V V++ + + Sbjct: 33 EGIVMRVEDSQILVDIGAKHEGVIPNQDLR----RLPPELVSGIKNGDTLQVYVMEPESK 88 Query: 252 RTRVSLGLKQLG-EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMD 310 + L L + E W G + V G V++ V G V S++ Sbjct: 89 EGELVLSLNMVQVERDWQEAQTMLENGQIIEAGVVGYNKGGLLVQVGR-VRGFVPASQV- 146 Query: 311 WTNKNIHP---------SKVVNVGDVVEVMVLDIDEERRRISL----GLKQCKANPWQQF 357 N+H + VG + + V+++D +R R+ L +++ + + ++ Sbjct: 147 ---VNLHSRTGTEGQQSAMTKMVGQNIPLKVIEVDRDRNRLVLSERAAMQRWRQSQKERL 203 Query: 358 AETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVRE-YKKGDEIA 416 ET G V G++ +T FG FI L GG DGL H+S++SW RE + G E+ Sbjct: 204 LETLEPGAVVTGRVNQLTPFGAFIDL-GGADGLAHISELSWQRVNHP--REVLQPGQEVQ 260 Query: 417 AVVLQVDAERERISLGVKQLAEDPFNNWVALNKK---GAIVTGKVTAVDAKGATVELADG 473 VL+VD +RERI L +++L DP W ++++ G ++ G+VT + G V + +G Sbjct: 261 VYVLEVDRDRERIGLSLRRLQPDP---WATIDQRYDLGQLIVGEVTNIAPFGVFVRVEEG 317 Query: 474 VEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKD 523 VEG + ASE + + +L +V+ K +DR+ + + LS+R D Sbjct: 318 VEGLIHASELTENGQSPDSLQQGQ--QVQVKVISLDRQRQRLGLSLRRVD 365 >UniRef50_P50889 40S ribosomal protein S1 n=37 Tax=Bacilli RepID=RS1_LEULA Length = 429 Score = 209 bits (533), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 133/365 (36%), Positives = 216/365 (59%), Gaps = 19/365 (5%) Query: 1 MTES---FAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKS--ESAIPAEQF-- 53 M+E+ F E + +I+ G +V G ++AID D V GL + E +PA ++ Sbjct: 34 MSETNNEFLAALESAADQIKV--GDVVTGELLAIDNDNQAV-VGLSTGEEGVVPAREYSD 90 Query: 54 -KNAQGELEIQVGDEVDVAL--DAVEDGFG-ETLLSREKAKRHEAWITLEKAYEDAETVT 109 +N E+++GD ++ + + D G LLS+++ +AW L ++ + +TV Sbjct: 91 DRNINLADELKIGDTIEAVVISNVTSDKEGVAYLLSKKRLDARKAWENL--SFAEGDTVD 148 Query: 110 GVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVS 169 + V+GG V++NG+R F+P S+V R V D + K+++ +VI++D +++S Sbjct: 149 AKVINAVRGGLIVDVNGVRGFVPASMVAERFVSDLNQFKNKDIKAQVIEIDPANARLILS 208 Query: 170 RRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVK 229 R+AV E +A+ ++ L G V+G V LTD+GAFVDLGGVDGL+H+++++ RVK Sbjct: 209 RKAVAAQELAAQLAEVFSKLSVGEVVEGTVARLTDFGAFVDLGGVDGLVHVSEISHDRVK 268 Query: 230 HPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTD 289 +P++++ GD++ VK+L D E+ R+SL +K PW A + G+ L G V + D Sbjct: 269 NPADVLTKGDKVDVKILALDTEKGRISLSIKATQRGPWDEAADQIAAGSVLEGTVKRVKD 328 Query: 290 YGCFVEIEEGVEGLVHVSEMDWTNKNI-HPSKVVNVGDVVEVMVLDIDEERRRISLGLKQ 348 +G FVEI G+EGLVHVS++ +NK I +PS+V+ GD V+V VLDI RISL +K Sbjct: 329 FGAFVEILPGIEGLVHVSQI--SNKRIENPSEVLKSGDKVQVKVLDIKPAEERISLSMKA 386 Query: 349 CKANP 353 + P Sbjct: 387 LEEKP 391 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 94/313 (30%), Positives = 152/313 (48%), Gaps = 36/313 (11%) Query: 235 VNVGDEITVKVLK---FDRERTRVSLGLKQL-GEDPWVAIAKRYPEGTKLTGRVTNLTDY 290 + +GD I V+ D+E L K+L W ++ + EG + +V N Sbjct: 100 LKIGDTIEAVVISNVTSDKEGVAYLLSKKRLDARKAWENLS--FAEGDTVDAKVINAVRG 157 Query: 291 GCFVEIEEGVEGLV--------HVSEMD-WTNKNIHPSKVVNVGDVVEVMVLDIDEERRR 341 G V++ GV G V VS+++ + NK+I + V++ID R Sbjct: 158 GLIVDVN-GVRGFVPASMVAERFVSDLNQFKNKDI------------KAQVIEIDPANAR 204 Query: 342 ISLGLKQCKANPWQQ-----FAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDI 396 + L K A F++ + G+ VEG + +TDFG F+ L GG+DGLVH+S+I Sbjct: 205 LILSRKAVAAQELAAQLAEVFSKL-SVGEVVEGTVARLTDFGAFVDL-GGVDGLVHVSEI 262 Query: 397 SWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTG 456 S + A KGD++ +L +D E+ RISL +K P++ G+++ G Sbjct: 263 SHDRVKNPA-DVLTKGDKVDVKILALDTEKGRISLSIKATQRGPWDEAADQIAAGSVLEG 321 Query: 457 KVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAIS 516 V V GA VE+ G+EG + S+ S R+E+ + VL GD+V+ K + IS Sbjct: 322 TVKRVKDFGAFVEILPGIEGLVHVSQISNKRIENPSEVLKSGDKVQVKVLDIKPAEERIS 381 Query: 517 LSVRAKDEADEKD 529 LS++A +E E++ Sbjct: 382 LSMKALEEKPERE 394 >UniRef50_B3T9S8 Putative S1 RNA binding domain protein n=1 Tax=uncultured marine microorganism HF4000_APKG7H23 RepID=B3T9S8_9ZZZZ Length = 379 Score = 209 bits (532), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 135/369 (36%), Positives = 220/369 (59%), Gaps = 12/369 (3%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK--NAQG 58 + S A+L +++ G IV G V+ D D +LV G K E IPA + + + G Sbjct: 11 LQPSMAELLDQAAPLQSLHRGDIVEGQVMRCDSDGILVSIGHKLEGIIPAREMRLLSRFG 70 Query: 59 ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 + + QVG V V + G+ +LS +KA+ E W L++ E + VTG I G +G Sbjct: 71 QDQSQVGATVLVYVLDPAGVEGQAILSLDKAQGEEVWHRLQQCAEAGQGVTGTIVGFNRG 130 Query: 119 GFTVELNGIRAFLPGS--LVDVRPVRDTL----HLEGKELEFKVIKLDQKRNNVVVSRRA 172 G V++ G++AF+P S ++ ++ DT G+E+ KV++++++R V+S RA Sbjct: 131 GAVVDVEGLQAFVPLSQMVLSIQAGGDTAEALAQRVGEEVSLKVLEVNRRRGRAVLSERA 190 Query: 173 VIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPS 232 ++ + +R+QL LQEG KG+V ++ +GAFVD+GG DGL+HI++++W V Sbjct: 191 MLREQREEQREQLFGELQEGEVRKGVVTGISSFGAFVDIGGADGLIHISELSWSPVSSVE 250 Query: 233 EIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGC 292 E+V V E+ V +L+ DRE R++L L+QL PW A+++ G ++G VT L D+G Sbjct: 251 EVVQVSQEVEVYILRVDREHRRIALSLRQLSPTPWTQAAQQFALGQLVSGTVTKLADFGA 310 Query: 293 FVEIEEGVEGLVHVSEMDWTNKNI-HPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKA 351 F +EE VEGL+HVSE+ ++++I HP +VV VGD + + ++ +D ER RI L L+Q + Sbjct: 311 FTRVEETVEGLIHVSEL--SDRHIRHPREVVQVGDSLTLRIVSLDLERHRIGLSLRQVE- 367 Query: 352 NPWQQFAET 360 +P +F E+ Sbjct: 368 DPEGKFEES 376 Score = 108 bits (269), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 84/284 (29%), Positives = 145/284 (51%), Gaps = 26/284 (9%) Query: 174 IESENSAERDQLLENLQE----GMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVK 229 I S + A+ +++ LQ+ G V G + GA VD+ G+ + ++ M ++ Sbjct: 95 ILSLDKAQGEEVWHRLQQCAEAGQGVTGTIVGFNRGGAVVDVEGLQAFVPLSQMVLS-IQ 153 Query: 230 HPSEIV-----NVGDEITVKVLKFDRERTRVSLG----LKQLGEDPWVAIAKRYPEGTKL 280 + VG+E+++KVL+ +R R R L L++ E+ + EG Sbjct: 154 AGGDTAEALAQRVGEEVSLKVLEVNRRRGRAVLSERAMLREQREEQREQLFGELQEGEVR 213 Query: 281 TGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERR 340 G VT ++ +G FV+I G +GL+H+SE+ W+ + V VEV +L +D E R Sbjct: 214 KGVVTGISSFGAFVDIG-GADGLIHISELSWSPVSSVEEVVQVS-QEVEVYILRVDREHR 271 Query: 341 RISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNV 400 RI+L L+Q PW Q A+ G V G + + DFG F ++ ++GL+H+S++S Sbjct: 272 RIALSLRQLSPTPWTQAAQQFALGQLVSGTVTKLADFGAFTRVEETVEGLIHVSELS--- 328 Query: 401 AGEEAVREYKK----GDEIAAVVLQVDAERERISLGVKQLAEDP 440 + +R ++ GD + ++ +D ER RI L ++Q+ EDP Sbjct: 329 --DRHIRHPREVVQVGDSLTLRIVSLDLERHRIGLSLRQV-EDP 369 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 91/352 (25%), Positives = 165/352 (46%), Gaps = 13/352 (3%) Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 L++L G V+G V G V +G ++G++ +M + + VG + V Sbjct: 25 LQSLHRGDIVEGQVMRCDSDGILVSIGHKLEGIIPAREMRLLS-RFGQDQSQVGATVLVY 83 Query: 245 VLKFDRERTRVSLGL-KQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGL 303 VL + L L K GE+ W + + G +TG + G V++E G++ Sbjct: 84 VLDPAGVEGQAILSLDKAQGEEVWHRLQQCAEAGQGVTGTIVGFNRGGAVVDVE-GLQAF 142 Query: 304 VHVSEMDWTNK---NIHPSKVVNVGDVVEVMVLDIDEERRRISLG----LKQCKANPWQQ 356 V +S+M + + + + VG+ V + VL+++ R R L L++ + +Q Sbjct: 143 VPLSQMVLSIQAGGDTAEALAQRVGEEVSLKVLEVNRRRGRAVLSERAMLREQREEQREQ 202 Query: 357 FAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIA 416 +G+ +G + I+ FG F+ + GG DGL+H+S++SW+ + E+ Sbjct: 203 LFGELQEGEVRKGVVTGISSFGAFVDI-GGADGLIHISELSWS-PVSSVEEVVQVSQEVE 260 Query: 417 AVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEG 476 +L+VD E RI+L ++QL+ P+ G +V+G VT + GA + + VEG Sbjct: 261 VYILRVDREHRRIALSLRQLSPTPWTQAAQQFALGQLVSGTVTKLADFGAFTRVEETVEG 320 Query: 477 YLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEK 528 + SE S + V+ VGD + + +D + I LS+R ++ + K Sbjct: 321 LIHVSELSDRHIRHPREVVQVGDSLTLRIVSLDLERHRIGLSLRQVEDPEGK 372 >UniRef50_C0QT24 Ribosomal protein S01 n=1 Tax=Persephonella marina EX-H1 RepID=C0QT24_PERMH Length = 550 Score = 209 bits (532), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 160/536 (29%), Positives = 273/536 (50%), Gaps = 47/536 (8%) Query: 2 TESFAQLFEESLKEIETRP----GSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ 57 E+F FE+ L+E + P G V GV+V I D VD G K+E I + N Sbjct: 1 MENFQSEFEKLLEESQDIPYYSKGERVTGVIVRIQDDYAFVDVGQKTEVVIDKNEI-NGL 59 Query: 58 GELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVK 117 E GD++ + G ++SR EA +E A+ E + ++ K+ Sbjct: 60 SE-----GDQITAVYLGRRNKDGYLVISRRPLIFSEALQRVEDAFSKGEKIGAKLDKKIN 114 Query: 118 GGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRN--NVVVSRRAVIE 175 GF V+L G++AFLP S +R RD L E + ++++D+ R +VVSR+ V++ Sbjct: 115 KGFLVDLGGVKAFLPYSESGLR--RDE-ELPPPEFDVYILRIDRDRKPPGIVVSRKKVLD 171 Query: 176 SENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEI 234 E +RD++ L+EG +V+G V+ + + GA + L V G L + +W R + SE+ Sbjct: 172 EEIKRKRDEIFSLLEEGKQVRGRVEKVQENGAVLSLERIVFGFLPRSLYSWDRDRSISEL 231 Query: 235 VNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFV 294 +VGDEI + V DRE ++ + L DPW K G ++ + ++ D+G V Sbjct: 232 -SVGDEIDLVVKSIDRENQKIIFSKRDLEPDPWKTFDKEV--GDQIEVEIKDINDFGLIV 288 Query: 295 EIEEGVEGLVHVSEMDWTNKNIHPSKVVNV---GDVVEVMVLDIDEERRRISLGLKQCKA 351 + +EG +H SE ++ P N G V+ ++++D E RR+ L +K Sbjct: 289 KTG-ALEGFIHKSE----TSHLRPENYKNSFRKGQKVKAKIIELDRENRRLKLSIKALHP 343 Query: 352 NPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWN--------VAGE 403 +P +F E + +G VEGKIK I + F+ L ++G++HL D +WN V Sbjct: 344 HPVDKFLEENPEGSVVEGKIKEIRNKIAFVDLGKDVEGVIHLEDATWNPKIKNIGQVLKG 403 Query: 404 EAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDA 463 + +RE+K + E++++ LG+KQ ++P+ + + + G ++ KV + Sbjct: 404 KRLREFK----------VLGREKDKVRLGIKQFRDNPWEEFFSKHSVGDVIKAKVKKLID 453 Query: 464 KGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSV 519 +GA V++ + VEG++ SE S++++E + LS+G E+EAK + K I LS+ Sbjct: 454 RGAFVDINEDVEGFIPLSEISKEKIEIPSDKLSLGQEIEAKIIKI--KGHDIILSI 507 >UniRef50_C1ZHL8 Ribosomal protein S1 n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZHL8_PLALI Length = 557 Score = 209 bits (532), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 115/339 (33%), Positives = 187/339 (55%), Gaps = 16/339 (4%) Query: 20 PGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ----GELEIQVGDEVDVALDAV 75 PG ++ V ++ + VD G +S +P F + GE + + ++ D Sbjct: 182 PGMKLKAKVQSVSPENTFVDLGFRSPGMLPTRNFPQGKPPHPGEEHLVIVEKYDA----- 236 Query: 76 EDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSL 135 E G L++ + W L+K + V + KGG V + IRAFLP S Sbjct: 237 EQGLIYVNLTKSTRRARGNWDELQKG----QIVEAYVTAVNKGGLEVAVGQIRAFLPASQ 292 Query: 136 VDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEV 195 V++ V GK+ +V +++ + N+VVSR+A++ +E + ++ G + Sbjct: 293 VELGFVSSMDAFVGKKFPVEVTEVNPAKRNLVVSRKAILIAERKEAAASFWDKVEVGQKF 352 Query: 196 KGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRV 255 G +K + DYGAFVDLGGVDG LH+ +M+W R+KHP++ V + V VL DRE+ ++ Sbjct: 353 TGTIKTIKDYGAFVDLGGVDGFLHVGEMSWTRIKHPTDCVREQQTVDVVVLSLDREKQKI 412 Query: 256 SLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTN-K 314 LG++QL ++PW + + Y G +TG+VT +TD+G F+E+E GVEG++H+SE+D+ K Sbjct: 413 GLGMRQLVQNPWNSAPETYAVGKTVTGKVTRITDFGAFIELEPGVEGMIHISELDYKRVK 472 Query: 315 NIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP 353 + + V+ G V+ VL+I ER+RISL +K K P Sbjct: 473 RV--ADVLKEGQQVDAQVLEIQPERQRISLSVKALKPKP 509 Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 67/164 (40%), Positives = 100/164 (60%), Gaps = 3/164 (1%) Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDID 336 G K TG + + DYG FV++ GV+G +HV EM WT HP+ V V+V+VL +D Sbjct: 349 GQKFTGTIKTIKDYGAFVDLG-GVDGFLHVGEMSWTRIK-HPTDCVREQQTVDVVVLSLD 406 Query: 337 EERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDI 396 E+++I LG++Q NPW ET+ G V GK+ ITDFG FI L+ G++G++H+S++ Sbjct: 407 REKQKIGLGMRQLVQNPWNSAPETYAVGKTVTGKVTRITDFGAFIELEPGVEGMIHISEL 466 Query: 397 SWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDP 440 + + K+G ++ A VL++ ER+RISL VK L P Sbjct: 467 DYKRV-KRVADVLKEGQQVDAQVLEIQPERQRISLSVKALKPKP 509 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 107/350 (30%), Positives = 168/350 (48%), Gaps = 38/350 (10%) Query: 187 ENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKV 245 + L GM++K V++++ FVDLG G+L + + HP G+E V V Sbjct: 178 DQLAPGMKLKAKVQSVSPENTFVDLGFRSPGMLPTRNFPQGKPPHP------GEEHLVIV 231 Query: 246 LKFDRERTRVSLGLKQ---LGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE---- 298 K+D E+ + + L + W + K G + VT + G V + + Sbjct: 232 EKYDAEQGLIYVNLTKSTRRARGNWDELQK----GQIVEAYVTAVNKGGLEVAVGQIRAF 287 Query: 299 ----GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLG-LKQCKANP 353 VE L VS MD P +V V +V+ R+ I + K+ A+ Sbjct: 288 LPASQVE-LGFVSSMDAFVGKKFPVEVTEVNPAKRNLVVS----RKAILIAERKEAAASF 342 Query: 354 WQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWN--VAGEEAVREYKK 411 W + G + G IK+I D+G F+ L GG+DG +H+ ++SW + VRE + Sbjct: 343 WDKV----EVGQKFTGTIKTIKDYGAFVDL-GGVDGFLHVGEMSWTRIKHPTDCVREQQT 397 Query: 412 GDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELA 471 D VVL +D E+++I LG++QL ++P+N+ G VTGKVT + GA +EL Sbjct: 398 VD---VVVLSLDREKQKIGLGMRQLVQNPWNSAPETYAVGKTVTGKVTRITDFGAFIELE 454 Query: 472 DGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRA 521 GVEG + SE RV+ VL G +V+A+ + + + ISLSV+A Sbjct: 455 PGVEGMIHISELDYKRVKRVADVLKEGQQVDAQVLEIQPERQRISLSVKA 504 >UniRef50_Q1NY10 RNA binding S1 n=3 Tax=Deltaproteobacteria RepID=Q1NY10_9DELT Length = 410 Score = 209 bits (531), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 121/344 (35%), Positives = 195/344 (56%), Gaps = 5/344 (1%) Query: 5 FAQLFE-ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQ 63 FA+LFE E + + PG ++ VV + ++ + +D G KSE ++ +F + +G + Sbjct: 4 FAELFEQEGVGGQQLEPGRKIKARVVEVGREWIFIDLGGKSEGSVAKAEFTDPEGNCTVA 63 Query: 64 VGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVE 123 GDE++V A D E + + K A LE+A+ V G + + KGGF + Sbjct: 64 AGDELEVFFLA--DKKNEKIFT-TKVGGAAAQAHLEEAFHGKVPVEGTVESETKGGFLIR 120 Query: 124 LNGI-RAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 + G RAF P S +D+R + G+ F +++ + N+++SRR ++E E + Sbjct: 121 IGGSSRAFCPYSQMDLRRAANPEEYLGQSFSFLIMEFREGGKNILLSRRQLLEQERQELK 180 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 +QL ++L+ G V G V ++ D+GAFVD+GG++GL+ I+++ W RV+ + G ++ Sbjct: 181 EQLRQSLKVGDLVTGTVTSVRDFGAFVDIGGIEGLIPISEIGWGRVEDIHSHLEPGRQVE 240 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 V V D E+ R SL LK DPW A +PEG+ GRV LTD+G FV + GV+G Sbjct: 241 VAVKSLDWEKDRYSLSLKDTLPDPWEQAAVSFPEGSTQRGRVARLTDFGAFVTLAPGVDG 300 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGL 346 LVH+S++ + HP +VV VGD +EV V +D E++RISL + Sbjct: 301 LVHISKLGAGRRLNHPREVVQVGDELEVRVEAVDVEQKRISLAV 344 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 87/287 (30%), Positives = 143/287 (49%), Gaps = 15/287 (5%) Query: 153 EFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG 212 E +V L K+N + + + +A + L E + V+G V++ T G + +G Sbjct: 67 ELEVFFLADKKNEKIFTTKV----GGAAAQAHLEEAFHGKVPVEGTVESETKGGFLIRIG 122 Query: 213 GVD-GLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIA 271 G + M +R +P E + G + +++F + L +QL E + Sbjct: 123 GSSRAFCPYSQMDLRRAANPEEYL--GQSFSFLIMEFREGGKNILLSRRQLLEQERQELK 180 Query: 272 KRYPEGTKL----TGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTN-KNIHPSKVVNVGD 326 ++ + K+ TG VT++ D+G FV+I G+EGL+ +SE+ W ++IH + G Sbjct: 181 EQLRQSLKVGDLVTGTVTSVRDFGAFVDIG-GIEGLIPISEIGWGRVEDIHSH--LEPGR 237 Query: 327 VVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGG 386 VEV V +D E+ R SL LK +PW+Q A + +G G++ +TDFG F+ L G Sbjct: 238 QVEVAVKSLDWEKDRYSLSLKDTLPDPWEQAAVSFPEGSTQRGRVARLTDFGAFVTLAPG 297 Query: 387 IDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGV 433 +DGLVH+S + + GDE+ V VD E++RISL V Sbjct: 298 VDGLVHISKLGAGRRLNHPREVVQVGDELEVRVEAVDVEQKRISLAV 344 Score = 88.2 bits (217), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 89/340 (26%), Positives = 153/340 (45%), Gaps = 18/340 (5%) Query: 187 ENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHP--SEIVNVGDEITVK 244 + L+ G ++K V + F+DLGG +A P + V GDE+ V Sbjct: 16 QQLEPGRKIKARVVEVGREWIFIDLGGKS----EGSVAKAEFTDPEGNCTVAAGDELEVF 71 Query: 245 VLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLV 304 L D++ ++ K G + + + + G V + T G + I Sbjct: 72 FLA-DKKNEKI-FTTKVGGAAAQAHLEEAFHGKVPVEGTVESETKGGFLIRIGGSSRAFC 129 Query: 305 HVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNK- 363 S+MD + +P + + G ++++ E + I L +Q Q+ E + Sbjct: 130 PYSQMD-LRRAANPEEYL--GQSFSFLIMEFREGGKNILLSRRQLLEQERQELKEQLRQS 186 Query: 364 ---GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL 420 GD V G + S+ DFG F+ + GGI+GL+ +S+I W E+ + G ++ V Sbjct: 187 LKVGDLVTGTVTSVRDFGAFVDI-GGIEGLIPISEIGWGRV-EDIHSHLEPGRQVEVAVK 244 Query: 421 QVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRA 480 +D E++R SL +K DP+ +G+ G+V + GA V LA GV+G + Sbjct: 245 SLDWEKDRYSLSLKDTLPDPWEQAAVSFPEGSTQRGRVARLTDFGAFVTLAPGVDGLVHI 304 Query: 481 SE-ASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSV 519 S+ + R+ V+ VGDE+E + VD + + ISL+V Sbjct: 305 SKLGAGRRLNHPREVVQVGDELEVRVEAVDVEQKRISLAV 344 Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust. Identities = 66/248 (26%), Positives = 101/248 (40%), Gaps = 14/248 (5%) Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDID 336 G K+ RV + F+++ EG V +E N V GD +EV L D Sbjct: 21 GRKIKARVVEVGREWIFIDLGGKSEGSVAKAEFTDPEGNC----TVAAGDELEVFFL-AD 75 Query: 337 EERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDI 396 ++ +I K A E + VEG ++S T G I + G S + Sbjct: 76 KKNEKI-FTTKVGGAAAQAHLEEAFHGKVPVEGTVESETKGGFLIRIGGSSRAFCPYSQM 134 Query: 397 SWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKK----GA 452 A A E G + ++++ + I L +QL E ++ G Sbjct: 135 DLRRA---ANPEEYLGQSFSFLIMEFREGGKNILLSRRQLLEQERQELKEQLRQSLKVGD 191 Query: 453 IVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKN 512 +VTG VT+V GA V++ G+EG + SE RVED L G +VE +D + Sbjct: 192 LVTGTVTSVRDFGAFVDIG-GIEGLIPISEIGWGRVEDIHSHLEPGRQVEVAVKSLDWEK 250 Query: 513 RAISLSVR 520 SLS++ Sbjct: 251 DRYSLSLK 258 >UniRef50_O06000 30S ribosomal protein S1 homolog n=76 Tax=Bacillaceae RepID=RS1H_BACC1 Length = 382 Score = 207 bits (528), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 124/348 (35%), Positives = 206/348 (59%), Gaps = 11/348 (3%) Query: 7 QLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGD 66 ++ EE + E + G +V G V +++ VLV+ G K++ IP + N E + D Sbjct: 4 KMNEEVMDSKELQVGDVVTGSVTKVEEKQVLVNVGYKTDGVIPISELANVHIE---KASD 60 Query: 67 EVDV----ALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 V++ L ++ + +LS+ +AWI L++ + + V GG V Sbjct: 61 VVELDQILELKIIKLEENDLVLSKRAVDAEKAWIELQEKFTSGHVFDVTVKDIVNGGLVV 120 Query: 123 ELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 +L G+R F+P SLV+V V D +GK L K+++LD+++N V++S +AV+E E +++ Sbjct: 121 DL-GVRGFIPASLVEVHYVEDFTDYKGKTLAVKIVELDREKNRVILSHKAVVELELDSKK 179 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 + + +L+EG V+G V+ LTD+GAFV++GGVDGL+HI+ ++ +RV+ PSE++ G ++ Sbjct: 180 KEAISSLKEGDVVEGTVQRLTDFGAFVNVGGVDGLVHISQISHERVEQPSEVLEQGQKVK 239 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 VKVL D + R+SL +K PW IA G G V L +G FVEI GVEG Sbjct: 240 VKVLSVDADTQRISLSIKAAQPGPWENIAGEVKAGDIREGIVKRLVTFGAFVEILPGVEG 299 Query: 303 LVHVSEMDWTNKNI-HPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC 349 LVHVS++ N+++ +P++V+ +G V+V VL++ +RISL +K+ Sbjct: 300 LVHVSQI--ANRHVKNPNEVLEMGQEVKVKVLEVHVAEKRISLSIKEA 345 Score = 125 bits (313), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 102/295 (34%), Positives = 158/295 (53%), Gaps = 21/295 (7%) Query: 152 LEFKVIKLDQKRNNVVVSRRAVIESENSAERD--QLLENLQEGMEVKGIVKNLTDYGAFV 209 LE K+IKL++ N++V+S+RAV AE+ +L E G VK++ + G V Sbjct: 68 LELKIIKLEE--NDLVLSKRAV-----DAEKAWIELQEKFTSGHVFDVTVKDIVNGGLVV 120 Query: 210 DLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVA 269 DLG V G + + + V+ ++ G + VK+++ DRE+ RV L K + E + Sbjct: 121 DLG-VRGFIPASLVEVHYVEDFTDYK--GKTLAVKIVELDREKNRVILSHKAVVELELDS 177 Query: 270 IAKR----YPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVG 325 K EG + G V LTD+G FV + GV+GLVH+S++ PS+V+ G Sbjct: 178 KKKEAISSLKEGDVVEGTVQRLTDFGAFVNVG-GVDGLVHISQISHERVE-QPSEVLEQG 235 Query: 326 DVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDG 385 V+V VL +D + +RISL +K + PW+ A GD EG +K + FG F+ + Sbjct: 236 QKVKVKVLSVDADTQRISLSIKAAQPGPWENIAGEVKAGDIREGIVKRLVTFGAFVEILP 295 Query: 386 GIDGLVHLSDIS-WNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAED 439 G++GLVH+S I+ +V V E G E+ VL+V +RISL +K+ E+ Sbjct: 296 GVEGLVHVSQIANRHVKNPNEVLEM--GQEVKVKVLEVHVAEKRISLSIKEAFEE 348 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 105/379 (27%), Positives = 185/379 (48%), Gaps = 36/379 (9%) Query: 189 LQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLK 247 LQ G V G V + + V++G DG++ I+++A ++ S++V + + +K++K Sbjct: 15 LQVGDVVTGSVTKVEEKQVLVNVGYKTDGVIPISELANVHIEKASDVVELDQILELKIIK 74 Query: 248 FDRERTRVSLGLKQL-GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHV 306 E + L + + E W+ + +++ G V ++ + G V++ GV G + Sbjct: 75 L--EENDLVLSKRAVDAEKAWIELQEKFTSGHVFDVTVKDIVNGGLVVDL--GVRGFIPA 130 Query: 307 SEM------DWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKA----NPWQQ 356 S + D+T+ G + V ++++D E+ R+ L K + ++ Sbjct: 131 SLVEVHYVEDFTDYK---------GKTLAVKIVELDREKNRVILSHKAVVELELDSKKKE 181 Query: 357 FAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIA 416 + +GD VEG ++ +TDFG F+ + GG+DGLVH+S IS E+ ++G ++ Sbjct: 182 AISSLKEGDVVEGTVQRLTDFGAFVNV-GGVDGLVHISQISHERV-EQPSEVLEQGQKVK 239 Query: 417 AVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEG 476 VL VDA+ +RISL +K P+ N K G I G V + GA VE+ GVEG Sbjct: 240 VKVLSVDADTQRISLSIKAAQPGPWENIAGEVKAGDIREGIVKRLVTFGAFVEILPGVEG 299 Query: 477 YLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNK 536 + S+ + V++ VL +G EV+ K V + ISLS+ K+A N Sbjct: 300 LVHVSQIANRHVKNPNEVLEMGQEVKVKVLEVHVAEKRISLSI--------KEAFEENNV 351 Query: 537 QED-ANFSNNAMAEAFKAA 554 ED + + NA + F+ + Sbjct: 352 TEDYSQYEPNADSATFQLS 370 >UniRef50_D1CBU2 RNA binding S1 domain protein n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CBU2_THET1 Length = 431 Score = 205 bits (521), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 125/337 (37%), Positives = 198/337 (58%), Gaps = 18/337 (5%) Query: 23 IVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQV--GDEVDVA-LDAVEDGF 79 IV GVV+ D ++VD G KSE +PA + E + + G + V+ L+A ED Sbjct: 81 IVDGVVMGFDNGDLIVDVGGKSEGIVPASELTTLSEEEKESLEPGQPIVVSVLNASEDNE 140 Query: 80 GETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLV--- 136 G +LS ++A+ W L++ E E V + G KGG V+L G+R F+P S + Sbjct: 141 GRIVLSVDRARAERLWRELQQKLETGEIVDCKVVGYNKGGLLVDLGGLRGFIPSSQISFL 200 Query: 137 ----DVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEG 192 D + +L G+ L+ KVI++++KRN +++S R + +++L+E L+EG Sbjct: 201 VSSNDADRQSELANLVGRTLQAKVIEVNRKRNRLILSERIATQERKETSKERLIEELREG 260 Query: 193 MEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRER 252 VKG V +L D+GAFVD+GG DGL+H+++++W R+ HPSE++ GDE+ V VL DRE Sbjct: 261 QIVKGRVTSLADFGAFVDIGGADGLIHLSEISWGRINHPSEVLKPGDEVDVMVLNIDREH 320 Query: 253 TRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWT 312 +++L +K+ +PW +RY G + G VT + +G FV +E+G+EGLVH+SE+ T Sbjct: 321 KKIALSMKRTQPEPWATAMERYDVGQIVEGEVTQIAPFGVFVRLEDGIEGLVHMSELGDT 380 Query: 313 NKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC 349 V VGD + + V+ +D +RRRI L ++Q Sbjct: 381 K--------VQVGDKLRLRVIKMDTQRRRIGLSVRQL 409 Score = 139 bits (349), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 82/215 (38%), Positives = 132/215 (61%), Gaps = 15/215 (6%) Query: 232 SEIVN-VGDEITVKVLKFDRERTRVSL----GLKQLGEDPWVAIAKRYPEGTKLTGRVTN 286 SE+ N VG + KV++ +R+R R+ L ++ E + + EG + GRVT+ Sbjct: 210 SELANLVGRTLQAKVIEVNRKRNRLILSERIATQERKETSKERLIEELREGQIVKGRVTS 269 Query: 287 LTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGL 346 L D+G FV+I G +GL+H+SE+ W N HPS+V+ GD V+VMVL+ID E ++I+L + Sbjct: 270 LADFGAFVDIG-GADGLIHLSEISWGRIN-HPSEVLKPGDEVDVMVLNIDREHKKIALSM 327 Query: 347 KQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAV 406 K+ + PW E ++ G VEG++ I FG+F+ L+ GI+GLVH+S++ G+ V Sbjct: 328 KRTQPEPWATAMERYDVGQIVEGEVTQIAPFGVFVRLEDGIEGLVHMSEL-----GDTKV 382 Query: 407 REYKKGDEIAAVVLQVDAERERISLGVKQLAEDPF 441 + GD++ V+++D +R RI L V+QL E + Sbjct: 383 ---QVGDKLRLRVIKMDTQRRRIGLSVRQLDEPDY 414 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 68/207 (32%), Positives = 112/207 (54%), Gaps = 13/207 (6%) Query: 324 VGDVVEVMVLDIDEERRRISL----GLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGI 379 VG ++ V++++ +R R+ L ++ K ++ E +G V+G++ S+ DFG Sbjct: 216 VGRTLQAKVIEVNRKRNRLILSERIATQERKETSKERLIEELREGQIVKGRVTSLADFGA 275 Query: 380 FIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAED 439 F+ + GG DGL+HLS+ISW + K GDE+ +VL +D E ++I+L +K+ + Sbjct: 276 FVDI-GGADGLIHLSEISWGRINHPS-EVLKPGDEVDVMVLNIDREHKKIALSMKRTQPE 333 Query: 440 PFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGD 499 P+ + G IV G+VT + G V L DG+EG + SE +V+ VGD Sbjct: 334 PWATAMERYDVGQIVEGEVTQIAPFGVFVRLEDGIEGLVHMSELGDTKVQ-------VGD 386 Query: 500 EVEAKFTGVDRKNRAISLSVRAKDEAD 526 ++ + +D + R I LSVR DE D Sbjct: 387 KLRLRVIKMDTQRRRIGLSVRQLDEPD 413 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 34/121 (28%), Positives = 67/121 (55%), Gaps = 14/121 (11%) Query: 149 GKELEFKVIKLDQKRNNVVVS-RRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGA 207 G E++ V+ +D++ + +S +R E +A +E G V+G V + +G Sbjct: 306 GDEVDVMVLNIDREHKKIALSMKRTQPEPWATA-----MERYDVGQIVEGEVTQIAPFGV 360 Query: 208 FVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDP 266 FV L G++GL+H++++ +V+ VGD++ ++V+K D +R R+ L ++QL E Sbjct: 361 FVRLEDGIEGLVHMSELGDTKVQ-------VGDKLRLRVIKMDTQRRRIGLSVRQLDEPD 413 Query: 267 W 267 + Sbjct: 414 Y 414 >UniRef50_Q49XT0 30S ribosomal protein S1 n=6 Tax=Staphylococcaceae RepID=RS1_STAS1 Length = 393 Score = 204 bits (520), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 127/360 (35%), Positives = 207/360 (57%), Gaps = 15/360 (4%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAID-KDVVLVDAGLKSESAIPAEQFKNAQGE 59 MTE F + +KE G V G V I+ K V++ G K IP Q + Sbjct: 1 MTEEFNESMINDIKE-----GDKVTGEVQEIEEKQVIVAVNGAKFNGIIPISQLSTHHID 55 Query: 60 LE---IQVGDEVDVALDAVE----DGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVI 112 ++VGDE+ + VE + G +LS+ + + +++ L++ ++ +T+ + Sbjct: 56 NPSDAVKVGDEIGAYVTKVEYDEENETGAYILSKRQLETEKSYEFLQEQLDNNQTIEAKV 115 Query: 113 NGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRA 172 VKGG V++ G R F+P SL+ + D EG+ L+ KV +LD N V++SR+A Sbjct: 116 TEVVKGGLVVDV-GQRGFVPASLISTDFIEDFSDFEGQVLKLKVEELDPANNRVILSRKA 174 Query: 173 VIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPS 232 V EN+ ++D+LLE+L EG ++G V LT++GAFVD+GGVDGL+H+++++ + VK P Sbjct: 175 VEALENAEKKDELLESLNEGDVIEGKVARLTNFGAFVDIGGVDGLVHVSELSHEHVKSPE 234 Query: 233 EIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGC 292 ++V++G+ + VK+ D++ R+SL +K P+ +I + EG + G V L ++G Sbjct: 235 DVVSIGETVNVKIKSVDKDSERISLSIKDTLPSPFESIKGEFNEGDVIEGTVVRLANFGA 294 Query: 293 FVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN 352 FVEI+ GV+GLVH+SE+ ++ PS+ + G VV V VL +D E RISL +K N Sbjct: 295 FVEIKPGVQGLVHISEISHSHIG-SPSEALEPGQVVSVKVLGVDVENERISLSIKATLPN 353 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 102/358 (28%), Positives = 177/358 (49%), Gaps = 32/358 (8%) Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV--DGLLHITDMAWKRVKHPSEIVNVGD 239 + ++ +++EG +V G V+ + + V + G +G++ I+ ++ + +PS+ V VGD Sbjct: 6 NESMINDIKEGDKVTGEVQEIEEKQVIVAVNGAKFNGIIPISQLSTHHIDNPSDAVKVGD 65 Query: 240 EITVKVLK--FDRERTRVS--LGLKQL-GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFV 294 EI V K +D E + L +QL E + + ++ + +VT + G V Sbjct: 66 EIGAYVTKVEYDEENETGAYILSKRQLETEKSYEFLQEQLDNNQTIEAKVTEVVKGGLVV 125 Query: 295 EIEEGVEGLVHVSEM------DWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQ 348 ++ G G V S + D+++ G V+++ V ++D R+ L K Sbjct: 126 DV--GQRGFVPASLISTDFIEDFSDFE---------GQVLKLKVEELDPANNRVILSRKA 174 Query: 349 CKA----NPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISW-NVAGE 403 +A + E+ N+GD +EGK+ +T+FG F+ + GG+DGLVH+S++S +V Sbjct: 175 VEALENAEKKDELLESLNEGDVIEGKVARLTNFGAFVDI-GGVDGLVHVSELSHEHVKSP 233 Query: 404 EAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDA 463 E V G+ + + VD + ERISL +K PF + +G ++ G V + Sbjct: 234 EDVVSI--GETVNVKIKSVDKDSERISLSIKDTLPSPFESIKGEFNEGDVIEGTVVRLAN 291 Query: 464 KGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRA 521 GA VE+ GV+G + SE S + + L G V K GVD +N ISLS++A Sbjct: 292 FGAFVEIKPGVQGLVHISEISHSHIGSPSEALEPGQVVSVKVLGVDVENERISLSIKA 349 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 85/272 (31%), Positives = 143/272 (52%), Gaps = 13/272 (4%) Query: 167 VVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWK 226 ++S+R +E+E S E L E L ++ V + G VD+G G + + ++ Sbjct: 86 ILSKRQ-LETEKSYEF--LQEQLDNNQTIEAKVTEVVKGGLVVDVGQ-RGFVPASLISTD 141 Query: 227 RVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQL----GEDPWVAIAKRYPEGTKLTG 282 ++ S+ G + +KV + D RV L K + + + + EG + G Sbjct: 142 FIEDFSDFE--GQVLKLKVEELDPANNRVILSRKAVEALENAEKKDELLESLNEGDVIEG 199 Query: 283 RVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRI 342 +V LT++G FV+I GV+GLVHVSE+ + P VV++G+ V V + +D++ RI Sbjct: 200 KVARLTNFGAFVDIG-GVDGLVHVSELSHEHVK-SPEDVVSIGETVNVKIKSVDKDSERI 257 Query: 343 SLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAG 402 SL +K +P++ N+GD +EG + + +FG F+ + G+ GLVH+S+IS + G Sbjct: 258 SLSIKDTLPSPFESIKGEFNEGDVIEGTVVRLANFGAFVEIKPGVQGLVHISEISHSHIG 317 Query: 403 EEAVREYKKGDEIAAVVLQVDAERERISLGVK 434 + + G ++ VL VD E ERISL +K Sbjct: 318 SPS-EALEPGQVVSVKVLGVDVENERISLSIK 348 >UniRef50_Q5M0R3 30S ribosomal protein S1 n=88 Tax=Bacilli RepID=Q5M0R3_STRT1 Length = 417 Score = 202 bits (514), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 111/282 (39%), Positives = 172/282 (60%), Gaps = 5/282 (1%) Query: 83 LLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVR 142 L+S+++ + +AW L E+ TV G VKGG +VE G+R F+P S++D R VR Sbjct: 104 LVSKKRLEARKAWDKLVGREEEVVTVKG--TRAVKGGLSVEFEGLRGFIPASMIDTRFVR 161 Query: 143 DTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNL 202 +T G+E + K+ ++D N ++SRR V+E+E R ++ L+ G V G V L Sbjct: 162 NTEQFVGQEFDAKIKEVDPAENRFILSRREVVEAEAIEARKEVFSKLEVGSVVTGKVARL 221 Query: 203 TDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQL 262 T +GAF+DLGGVDGL+H+T+++ +R P +V+VGDEI VKVL D E RVSL LK Sbjct: 222 TSFGAFIDLGGVDGLVHVTELSHERNVSPKSVVSVGDEIEVKVLAIDEEAGRVSLSLKAT 281 Query: 263 GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNI-HPSKV 321 PW + ++ G + G+V LTD+G FVE+ G++GLVH+S++ ++K + +P V Sbjct: 282 TPGPWDGVEQKLAAGDVIEGKVKRLTDFGGFVEVLPGIDGLVHISQI--SHKRVENPKDV 339 Query: 322 VNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNK 363 ++VG V V VL+++ + R+SL +K + P E + K Sbjct: 340 LSVGQDVTVKVLEVNADAERVSLSIKALEERPANAEGENNEK 381 Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 94/264 (35%), Positives = 143/264 (54%), Gaps = 11/264 (4%) Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 D+L+ +E + VKG G V+ G+ G + + + + V++ + V G E Sbjct: 117 DKLVGREEEVVTVKGT--RAVKGGLSVEFEGLRGFIPASMIDTRFVRNTEQFV--GQEFD 172 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAK----RYPEGTKLTGRVTNLTDYGCFVEIEE 298 K+ + D R L +++ E + K + G+ +TG+V LT +G F+++ Sbjct: 173 AKIKEVDPAENRFILSRREVVEAEAIEARKEVFSKLEVGSVVTGKVARLTSFGAFIDLG- 231 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFA 358 GV+GLVHV+E+ +N+ P VV+VGD +EV VL IDEE R+SL LK PW Sbjct: 232 GVDGLVHVTELSH-ERNVSPKSVVSVGDEIEVKVLAIDEEAGRVSLSLKATTPGPWDGVE 290 Query: 359 ETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAV 418 + GD +EGK+K +TDFG F+ + GIDGLVH+S IS E G ++ Sbjct: 291 QKLAAGDVIEGKVKRLTDFGGFVEVLPGIDGLVHISQISHKRV-ENPKDVLSVGQDVTVK 349 Query: 419 VLQVDAERERISLGVKQLAEDPFN 442 VL+V+A+ ER+SL +K L E P N Sbjct: 350 VLEVNADAERVSLSIKALEERPAN 373 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 94/323 (29%), Positives = 156/323 (48%), Gaps = 21/323 (6%) Query: 213 GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKF----DRERTRVSLGLKQL-GEDPW 267 G++G+L ++ R + +++V G+ + V VL+ D + + K+L W Sbjct: 57 GIEGVLTRRELTNDRDANVADLVKDGETLEVLVLRQVVGKDTDTVTYLVSKKRLEARKAW 116 Query: 268 VAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDV 327 + R E + G T G VE E G+ G + S +D + + ++ VG Sbjct: 117 DKLVGREEEVVTVKG--TRAVKGGLSVEFE-GLRGFIPASMID--TRFVRNTEQF-VGQE 170 Query: 328 VEVMVLDIDEERRRISLGLKQC-KANPWQQFAETHNK---GDRVEGKIKSITDFGIFIGL 383 + + ++D R L ++ +A + E +K G V GK+ +T FG FI L Sbjct: 171 FDAKIKEVDPAENRFILSRREVVEAEAIEARKEVFSKLEVGSVVTGKVARLTSFGAFIDL 230 Query: 384 DGGIDGLVHLSDISW--NVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPF 441 GG+DGLVH++++S NV+ + V GDEI VL +D E R+SL +K P+ Sbjct: 231 -GGVDGLVHVTELSHERNVSPKSVV---SVGDEIEVKVLAIDEEAGRVSLSLKATTPGPW 286 Query: 442 NNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEV 501 + G ++ GKV + G VE+ G++G + S+ S RVE+ VLSVG +V Sbjct: 287 DGVEQKLAAGDVIEGKVKRLTDFGGFVEVLPGIDGLVHISQISHKRVENPKDVLSVGQDV 346 Query: 502 EAKFTGVDRKNRAISLSVRAKDE 524 K V+ +SLS++A +E Sbjct: 347 TVKVLEVNADAERVSLSIKALEE 369 >UniRef50_Q1D6H1 Ribosomal protein S1 family protein n=2 Tax=Cystobacterineae RepID=Q1D6H1_MYXXD Length = 548 Score = 201 bits (512), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 149/467 (31%), Positives = 237/467 (50%), Gaps = 61/467 (13%) Query: 2 TESFAQLFEESLKEIET------RPGSIVRGVVVAIDKDV--VLVDAGLKSESAIPAEQF 53 +SFA++FE KE T R G VRG + + D V V+ KSE+ I + Sbjct: 50 AQSFAEMFEAQAKEGGTPSRKGLRVGEKVRGTIFQLGADTAFVSVEGAAKSEAMIELREL 109 Query: 54 KNAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVIN 113 K+ +G L VGD +D + VE G LLSR AK L +A V G++ Sbjct: 110 KDDEGILRFGVGDTIDAHV--VEVGAKGILLSRALAKGSANLALLAEARASGMPVEGLVL 167 Query: 114 GKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAV 173 KGG V + IRAF P S +D+R V G++L+F+V ++ ++ NVV+SRR++ Sbjct: 168 SVNKGGVEVAIGDIRAFCPISQLDLRYVEKPDQFIGEKLQFRVSEVRER--NVVLSRRSL 225 Query: 174 IESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSE 233 +E E + +NL +G VKG V + D+G FVDLGGV+G++ ++++++ RV HPS+ Sbjct: 226 LEDEQRQLAAETRKNLAQGKIVKGKVTGVRDFGVFVDLGGVEGMIPVSELSYTRVGHPSD 285 Query: 234 IVNVGDEITVKVLKFD----------RERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGR 283 +V VGD++ V++L+ + +++ R++L ++ EDP+ EG +L G+ Sbjct: 286 VVKVGDDVEVEILRMEAGQPNSPDKSKQKERITLSMRSRQEDPFQKALSEIKEGDRLQGK 345 Query: 284 VTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNI-HPSKVVNVGDVVEVMVLDIDEERRRI 342 V L +G FVE+ GV+GLVH+S + +++ I HP VV G+ + V V ID + +RI Sbjct: 346 VVRLQQFGAFVELRPGVDGLVHISAL--SDRRIAHPRDVVKEGETIWVSVEKIDTQEKRI 403 Query: 343 SLGLKQCKANPWQQFAE-------------------------THNKGDRVEGKIKSITDF 377 GL++ Q+ E K DR+E + Sbjct: 404 --GLRRISEEEAQRPPEERTAPAAEAAAPAQPATPRPKVGQVVVGKVDRIE-------PY 454 Query: 378 GIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDA 424 G+F+ GG GL+ S+ G + + Y G E+ +L +DA Sbjct: 455 GVFLAFPGG-KGLLPASETGTE-RGTDLRKHYSLGQEVKVAILDIDA 499 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 113/385 (29%), Positives = 187/385 (48%), Gaps = 43/385 (11%) Query: 176 SENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIV 235 ++ SA L E GM V+G+V ++ G V +G + I+ + + V+ P + + Sbjct: 143 AKGSANLALLAEARASGMPVEGLVLSVNKGGVEVAIGDIRAFCPISQLDLRYVEKPDQFI 202 Query: 236 NVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIA----KRYPEGTKLTGRVTNLTDYG 291 G+++ +V + RER V L + L ED +A K +G + G+VT + D+G Sbjct: 203 --GEKLQFRVSEV-RERN-VVLSRRSLLEDEQRQLAAETRKNLAQGKIVKGKVTGVRDFG 258 Query: 292 CFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVL----------DIDEERRR 341 FV++ GVEG++ VSE+ +T HPS VV VGD VEV +L D +++ R Sbjct: 259 VFVDLG-GVEGMIPVSELSYTRVG-HPSDVVKVGDDVEVEILRMEAGQPNSPDKSKQKER 316 Query: 342 ISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDIS-WNV 400 I+L ++ + +P+Q+ +GDR++GK+ + FG F+ L G+DGLVH+S +S + Sbjct: 317 ITLSMRSRQEDPFQKALSEIKEGDRLQGKVVRLQQFGAFVELRPGVDGLVHISALSDRRI 376 Query: 401 AGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAED-----PFNNWVALNKKGAIVT 455 A V K+G+ I V ++D + +RI G+++++E+ P + A Sbjct: 377 AHPRDV--VKEGETIWVSVEKIDTQEKRI--GLRRISEEEAQRPPEERTAPAAEAAAPAQ 432 Query: 456 GKVTAVDAKGATVELADGVEGY------------LRASEASRDRVEDATLVLSVGDEVEA 503 V D +E Y L ASE +R D S+G EV+ Sbjct: 433 PATPRPKVGQVVVGKVDRIEPYGVFLAFPGGKGLLPASETGTERGTDLRKHYSLGQEVKV 492 Query: 504 KFTGVDRKNRAISLSVRAKDEADEK 528 +D + I LSV A A+E+ Sbjct: 493 AILDIDASGK-IRLSVTAAIRAEER 516 Score = 78.2 bits (191), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 88/355 (24%), Positives = 168/355 (47%), Gaps = 27/355 (7%) Query: 187 ENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVN--VGDEITVK 244 + L+ G +V+G + L AFV + G + ++ + +K I+ VGD I Sbjct: 70 KGLRVGEKVRGTIFQLGADTAFVSVEGAAKSEAMIEL--RELKDDEGILRFGVGDTIDAH 127 Query: 245 VLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLV 304 V++ + +S L + G +A+ G + G V ++ G V I + + Sbjct: 128 VVEVGAKGILLSRALAK-GSANLALLAEARASGMPVEGLVLSVNKGGVEVAIGD-IRAFC 185 Query: 305 HVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNK- 363 +S++D P + + G+ ++ V ++ E R + L + + +Q A K Sbjct: 186 PISQLDLRYVE-KPDQFI--GEKLQFRVSEVRE--RNVVLSRRSLLEDEQRQLAAETRKN 240 Query: 364 ---GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL 420 G V+GK+ + DFG+F+ L GG++G++ +S++S+ G + K GD++ +L Sbjct: 241 LAQGKIVKGKVTGVRDFGVFVDL-GGVEGMIPVSELSYTRVGHPS-DVVKVGDDVEVEIL 298 Query: 421 QVDA----------ERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVEL 470 +++A ++ERI+L ++ EDPF ++ K+G + GKV + GA VEL Sbjct: 299 RMEAGQPNSPDKSKQKERITLSMRSRQEDPFQKALSEIKEGDRLQGKVVRLQQFGAFVEL 358 Query: 471 ADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEA 525 GV+G + S S R+ V+ G+ + +D + + I L +++EA Sbjct: 359 RPGVDGLVHISALSDRRIAHPRDVVKEGETIWVSVEKIDTQEKRIGLRRISEEEA 413 >UniRef50_Q5HFU7 30S ribosomal protein S1 n=61 Tax=Staphylococcus RepID=RS1_STAAC Length = 391 Score = 201 bits (510), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 129/361 (35%), Positives = 205/361 (56%), Gaps = 17/361 (4%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAI-DKDVVLVDAGLKSESAIPAEQFKNAQGE 59 MTE F + +KE G V G V + DK VV+ G K IP Q + Sbjct: 1 MTEEFNESMINDIKE-----GDKVTGEVQQVEDKQVVVHINGGKFNGIIPISQLSTHHID 55 Query: 60 LEIQV---GDEVDVALDAVE----DGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVI 112 +V GDEV+ + VE + G +LSR + + +++ L++ ++ E + + Sbjct: 56 SPSEVVKEGDEVEAYVTKVEFDEENETGAYILSRRQLETEKSYSYLQEKLDNNEIIEAKV 115 Query: 113 NGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRA 172 VKGG V++ G R F+P SL+ + D +G+ + KV +LD + N V++SR+A Sbjct: 116 TEVVKGGLVVDV-GQRGFVPASLISTDFIEDFSVFDGQTIRIKVEELDPENNRVILSRKA 174 Query: 173 VIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPS 232 V + EN A++DQLL++L EG + G V LT +GAF+D+GGVDGL+H+++++ + V+ P Sbjct: 175 VEQEENDAKKDQLLQSLNEGDVIDGKVARLTQFGAFIDIGGVDGLVHVSELSHEHVQTPE 234 Query: 233 EIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGC 292 E+V++G ++ VK+ DR+ R+SL +K P+ I ++ E + G V L ++G Sbjct: 235 EVVSIGQDVKVKIKSIDRDTERISLSIKDTLPTPFENIKGQFHENDVIEGVVVRLANFGA 294 Query: 293 FVEIEEGVEGLVHVSEMDWTNKNI-HPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKA 351 FVEI GV+GLVH+SE+ +K+I P +V+ G V V +L IDEE R+SL +K Sbjct: 295 FVEIAPGVQGLVHISEI--AHKHIGTPGEVLEPGQQVNVKILGIDEENERVSLSIKATLP 352 Query: 352 N 352 N Sbjct: 353 N 353 Score = 124 bits (311), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 101/351 (28%), Positives = 174/351 (49%), Gaps = 20/351 (5%) Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGG--VDGLLHITDMAWKRVKHPSEIVNVGDE 240 + ++ +++EG +V G V+ + D V + G +G++ I+ ++ + PSE+V GDE Sbjct: 7 ESMINDIKEGDKVTGEVQQVEDKQVVVHINGGKFNGIIPISQLSTHHIDSPSEVVKEGDE 66 Query: 241 ITVKVLK--FDRERTRVS--LGLKQL-GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVE 295 + V K FD E + L +QL E + + ++ + +VT + G V+ Sbjct: 67 VEAYVTKVEFDEENETGAYILSRRQLETEKSYSYLQEKLDNNEIIEAKVTEVVKGGLVVD 126 Query: 296 IEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN--- 352 + G G V S + + I V + G + + V ++D E R+ L K + Sbjct: 127 V--GQRGFVPASLI--STDFIEDFSVFD-GQTIRIKVEELDPENNRVILSRKAVEQEEND 181 Query: 353 -PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISW-NVAGEEAVREYK 410 Q ++ N+GD ++GK+ +T FG FI + GG+DGLVH+S++S +V E V Sbjct: 182 AKKDQLLQSLNEGDVIDGKVARLTQFGAFIDI-GGVDGLVHVSELSHEHVQTPEEV--VS 238 Query: 411 KGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVEL 470 G ++ + +D + ERISL +K PF N + ++ G V + GA VE+ Sbjct: 239 IGQDVKVKIKSIDRDTERISLSIKDTLPTPFENIKGQFHENDVIEGVVVRLANFGAFVEI 298 Query: 471 ADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRA 521 A GV+G + SE + + VL G +V K G+D +N +SLS++A Sbjct: 299 APGVQGLVHISEIAHKHIGTPGEVLEPGQQVNVKILGIDEENERVSLSIKA 349 >UniRef50_A8YV34 30S ribosomal protein S1 n=29 Tax=Lactobacillus RepID=A8YV34_LACH4 Length = 403 Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 105/274 (38%), Positives = 167/274 (60%), Gaps = 4/274 (1%) Query: 80 GETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVR 139 GE S + K EA+ L+K +E+ + G + V+GG V++ G R FLP SL+ R Sbjct: 87 GEFFFSVTRLKEREAYDKLQKDFEEGNAIEGTVTSSVRGGLLVDV-GTRGFLPASLISNR 145 Query: 140 PVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIV 199 V D GK ++ K+ ++D +N +++S + +IE E D++ L G ++G V Sbjct: 146 YVSDLKPYIGKTMKLKITEIDPNKNRLILSHKDLIEEEREEAFDKVASQLVVGDVIEGKV 205 Query: 200 KNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGL 259 LT++GAF+D+GGVDGL+HI+++++K V PS+++ G ++ VKV+ D +R R+SL + Sbjct: 206 SRLTNFGAFIDVGGVDGLVHISEISYKHVDKPSDVLKAGQDVKVKVIGIDDDRHRISLSI 265 Query: 260 KQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNI-HP 318 KQ P+ EG G V +LT++G FVE+ +G++GLVHVSE+ +NK++ P Sbjct: 266 KQTEPSPFEQATADLNEGDVFEGEVKSLTNFGAFVEVADGIQGLVHVSEI--SNKHVDKP 323 Query: 319 SKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN 352 S V+ V V+V VL+ID RRISL +K +N Sbjct: 324 SDVLKVDQTVKVKVLNIDPSDRRISLSIKAADSN 357 Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 85/256 (33%), Positives = 146/256 (57%), Gaps = 10/256 (3%) Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 D+L ++ +EG ++G V + G VD+G G L + ++ + V + G + Sbjct: 103 DKLQKDFEEGNAIEGTVTSSVRGGLLVDVG-TRGFLPASLISNRYVSDLKPYI--GKTMK 159 Query: 243 VKVLKFDRERTRVSLGLKQL----GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE 298 +K+ + D + R+ L K L E+ + +A + G + G+V+ LT++G F+++ Sbjct: 160 LKITEIDPNKNRLILSHKDLIEEEREEAFDKVASQLVVGDVIEGKVSRLTNFGAFIDVG- 218 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFA 358 GV+GLVH+SE+ + + + PS V+ G V+V V+ ID++R RISL +KQ + +P++Q Sbjct: 219 GVDGLVHISEISYKHVD-KPSDVLKAGQDVKVKVIGIDDDRHRISLSIKQTEPSPFEQAT 277 Query: 359 ETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAV 418 N+GD EG++KS+T+FG F+ + GI GLVH+S+IS N ++ K + Sbjct: 278 ADLNEGDVFEGEVKSLTNFGAFVEVADGIQGLVHVSEIS-NKHVDKPSDVLKVDQTVKVK 336 Query: 419 VLQVDAERERISLGVK 434 VL +D RISL +K Sbjct: 337 VLNIDPSDRRISLSIK 352 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 108/362 (29%), Positives = 184/362 (50%), Gaps = 22/362 (6%) Query: 176 SENSAERDQLLENLQEGMEVKGIV--KNLTDYGAFVDLG----GVDGLLHITDMAWKRVK 229 SENS + L+ +Q G+EV IV + L +++G GV+G++ + R Sbjct: 2 SENSNQFLDALKQMQ-GVEVGDIVDVEVLDVEDGQINVGVVNAGVEGVITRREYTSDRNA 60 Query: 230 HPSEIVNVGDEITVKVLKF---DRERTRVSLGLKQLGE-DPWVAIAKRYPEGTKLTGRVT 285 ++V GD+ VL+ D+E + +L E + + + K + EG + G VT Sbjct: 61 DLRDLVKPGDKFKALVLRRAGGDKENGEFFFSVTRLKEREAYDKLQKDFEEGNAIEGTVT 120 Query: 286 NLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLG 345 + G V++ G G + S + +N+ + K +G +++ + +ID + R+ L Sbjct: 121 SSVRGGLLVDV--GTRGFLPASLI--SNRYVSDLKPY-IGKTMKLKITEIDPNKNRLILS 175 Query: 346 LKQC----KANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVA 401 K + + + A GD +EGK+ +T+FG FI + GG+DGLVH+S+IS+ Sbjct: 176 HKDLIEEEREEAFDKVASQLVVGDVIEGKVSRLTNFGAFIDV-GGVDGLVHISEISYKHV 234 Query: 402 GEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAV 461 ++ K G ++ V+ +D +R RISL +KQ PF A +G + G+V ++ Sbjct: 235 -DKPSDVLKAGQDVKVKVIGIDDDRHRISLSIKQTEPSPFEQATADLNEGDVFEGEVKSL 293 Query: 462 DAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRA 521 GA VE+ADG++G + SE S V+ + VL V V+ K +D +R ISLS++A Sbjct: 294 TNFGAFVEVADGIQGLVHVSEISNKHVDKPSDVLKVDQTVKVKVLNIDPSDRRISLSIKA 353 Query: 522 KD 523 D Sbjct: 354 AD 355 Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 61/248 (24%), Positives = 115/248 (46%), Gaps = 15/248 (6%) Query: 296 IEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDI---DEERRRISLGLKQCKAN 352 + GVEG++ E +++N +V GD + +VL D+E + + K Sbjct: 41 VNAGVEGVITRREY-TSDRNADLRDLVKPGDKFKALVLRRAGGDKENGEFFFSVTRLKER 99 Query: 353 -PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKK 411 + + + +G+ +EG + S G+ + D G G + S IS + ++ Y Sbjct: 100 EAYDKLQKDFEEGNAIEGTVTSSVRGGLLV--DVGTRGFLPASLISNRYVSD--LKPYI- 154 Query: 412 GDEIAAVVLQVDAERERISLGVKQLAED----PFNNWVALNKKGAIVTGKVTAVDAKGAT 467 G + + ++D + R+ L K L E+ F+ + G ++ GKV+ + GA Sbjct: 155 GKTMKLKITEIDPNKNRLILSHKDLIEEEREEAFDKVASQLVVGDVIEGKVSRLTNFGAF 214 Query: 468 VELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADE 527 +++ GV+G + SE S V+ + VL G +V+ K G+D ISLS++ + + Sbjct: 215 IDVG-GVDGLVHISEISYKHVDKPSDVLKAGQDVKVKVIGIDDDRHRISLSIKQTEPSPF 273 Query: 528 KDAIATVN 535 + A A +N Sbjct: 274 EQATADLN 281 >UniRef50_A5N6D1 30S ribosomal protein S1 n=2 Tax=Clostridium kluyveri RepID=A5N6D1_CLOK5 Length = 314 Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 106/278 (38%), Positives = 172/278 (61%), Gaps = 1/278 (0%) Query: 94 AWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELE 153 W LE +++ + VI VKGG +L+G+RAF+P S + V+ D GK L+ Sbjct: 22 VWSKLENEFKNEDIFEVVIKELVKGGLIADLHGLRAFIPASHISVKYTDDLKEFIGKTLK 81 Query: 154 FKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG 213 K+I+LD+ +N +V+S + V + E +L + +G +++G V +T++G FVDLGG Sbjct: 82 VKLIQLDKSKNKIVLSGKEVEKLELEEMSKKLWSTISKGDKIEGRVSRITNFGVFVDLGG 141 Query: 214 VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKR 273 V+GL+HI++++WK++K PSE+V+VGD++ V VL +++R R+SL +K+ PW I K+ Sbjct: 142 VEGLVHISELSWKKIKDPSEVVSVGDKLKVYVLNLNQDRNRISLSIKRTLNSPWENIGKK 201 Query: 274 YPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVL 333 Y + G V+ + + G F+EIE G+EGLVH+SE+ + P +V+ VGD V+V +L Sbjct: 202 YKSNDIVDGIVSKVINIGAFIEIEPGIEGLVHISEISQEHITT-PEEVLRVGDKVKVKIL 260 Query: 334 DIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKI 371 +IDE+ RISL +K+ + F E D+ KI Sbjct: 261 NIDEKASRISLSIKEAQDKFSPNFKEYKEYLDKDSDKI 298 Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 85/255 (33%), Positives = 149/255 (58%), Gaps = 22/255 (8%) Query: 198 IVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSL 257 ++K L G DL G+ + + ++ K E + G + VK+++ D+ + ++ L Sbjct: 39 VIKELVKGGLIADLHGLRAFIPASHISVKYTDDLKEFI--GKTLKVKLIQLDKSKNKIVL 96 Query: 258 G--------LKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEM 309 L+++ + W I+K G K+ GRV+ +T++G FV++ GVEGLVH+SE+ Sbjct: 97 SGKEVEKLELEEMSKKLWSTISK----GDKIEGRVSRITNFGVFVDLG-GVEGLVHISEL 151 Query: 310 DWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEG 369 W K PS+VV+VGD ++V VL+++++R RISL +K+ +PW+ + + D V+G Sbjct: 152 SW-KKIKDPSEVVSVGDKLKVYVLNLNQDRNRISLSIKRTLNSPWENIGKKYKSNDIVDG 210 Query: 370 KIKSITDFGIFIGLDGGIDGLVHLSDISWN--VAGEEAVREYKKGDEIAAVVLQVDAERE 427 + + + G FI ++ GI+GLVH+S+IS EE +R GD++ +L +D + Sbjct: 211 IVSKVINIGAFIEIEPGIEGLVHISEISQEHITTPEEVLRV---GDKVKVKILNIDEKAS 267 Query: 428 RISLGVKQLAEDPFN 442 RISL +K+ A+D F+ Sbjct: 268 RISLSIKE-AQDKFS 281 Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 67/201 (33%), Positives = 114/201 (56%), Gaps = 6/201 (2%) Query: 324 VGDVVEVMVLDIDEERRRISLG----LKQCKANPWQQFAETHNKGDRVEGKIKSITDFGI 379 +G ++V ++ +D+ + +I L K ++ T +KGD++EG++ IT+FG+ Sbjct: 76 IGKTLKVKLIQLDKSKNKIVLSGKEVEKLELEEMSKKLWSTISKGDKIEGRVSRITNFGV 135 Query: 380 FIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAED 439 F+ L GG++GLVH+S++SW + + GD++ VL ++ +R RISL +K+ Sbjct: 136 FVDL-GGVEGLVHISELSWKKIKDPS-EVVSVGDKLKVYVLNLNQDRNRISLSIKRTLNS 193 Query: 440 PFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGD 499 P+ N K IV G V+ V GA +E+ G+EG + SE S++ + VL VGD Sbjct: 194 PWENIGKKYKSNDIVDGIVSKVINIGAFIEIEPGIEGLVHISEISQEHITTPEEVLRVGD 253 Query: 500 EVEAKFTGVDRKNRAISLSVR 520 +V+ K +D K ISLS++ Sbjct: 254 KVKVKILNIDEKASRISLSIK 274 >UniRef50_C8R0E8 RNA binding S1 domain protein n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R0E8_9DELT Length = 417 Score = 198 bits (504), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 120/342 (35%), Positives = 192/342 (56%), Gaps = 9/342 (2%) Query: 9 FEESLKEIET-----RPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQ 63 FEE E E PG + VV+I ++ + +D G KSE A+ +F + +G + Sbjct: 4 FEELFAEHEAAGEKLTPGQQITAEVVSIAREWIFIDLGGKSEGAVAKAEFIDQEGNCTVA 63 Query: 64 VGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVE 123 VGD+V V A + + L K LE+AY V G + + KGGF V Sbjct: 64 VGDKVTVYFLAEKK---QEKLFTTKVGGAATQAHLEEAYHSGIPVEGTVEAEGKGGFQVR 120 Query: 124 LNG-IRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 ++G +RAF P S + +R V + G+ FK+I+ + N+++SRR ++E E +A + Sbjct: 121 ISGNVRAFCPFSQMALRRVENNEEYLGQGFAFKIIEFREGGRNIILSRRRLLEEERAARK 180 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 ++L ++L G +V G V ++ +GAFVD+GG++GL+ ++++ W V+ + G E+ Sbjct: 181 EELRQSLAVGDKVTGTVTSVQKFGAFVDIGGIEGLIPMSEIGWGTVEDIHSHLEPGREVE 240 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 V V D E+ R SL LK DPW +A R+PEG++ G+V L D+G FV + G++G Sbjct: 241 VVVKSLDWEKERYSLSLKDTLPDPWEGVAARFPEGSRHQGKVARLMDFGAFVTLAPGIDG 300 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISL 344 LVH+S++ + HP +VV G+ +EV + ID ERRR+SL Sbjct: 301 LVHISKLGAGRRINHPREVVQPGETLEVEIEAIDSERRRLSL 342 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 83/268 (30%), Positives = 133/268 (49%), Gaps = 11/268 (4%) Query: 178 NSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVN 236 +A + L E G+ V+G V+ G V + G V + MA +RV++ E + Sbjct: 88 GAATQAHLEEAYHSGIPVEGTVEAEGKGGFQVRISGNVRAFCPFSQMALRRVENNEEYLG 147 Query: 237 VGDEITVKVLKFDRERTRVSLGLKQL----GEDPWVAIAKRYPEGTKLTGRVTNLTDYGC 292 G K+++F + L ++L + + G K+TG VT++ +G Sbjct: 148 QG--FAFKIIEFREGGRNIILSRRRLLEEERAARKEELRQSLAVGDKVTGTVTSVQKFGA 205 Query: 293 FVEIEEGVEGLVHVSEMDW-TNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKA 351 FV+I G+EGL+ +SE+ W T ++IH + G VEV+V +D E+ R SL LK Sbjct: 206 FVDIG-GIEGLIPMSEIGWGTVEDIHSH--LEPGREVEVVVKSLDWEKERYSLSLKDTLP 262 Query: 352 NPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKK 411 +PW+ A +G R +GK+ + DFG F+ L GIDGLVH+S + + Sbjct: 263 DPWEGVAARFPEGSRHQGKVARLMDFGAFVTLAPGIDGLVHISKLGAGRRINHPREVVQP 322 Query: 412 GDEIAAVVLQVDAERERISLGVKQLAED 439 G+ + + +D+ER R+SL V AE Sbjct: 323 GETLEVEIEAIDSERRRLSLSVPPPAES 350 Score = 84.7 bits (208), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 94/357 (26%), Positives = 160/357 (44%), Gaps = 24/357 (6%) Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVG 238 AE + E L G ++ V ++ F+DLGG +G + + + + V VG Sbjct: 9 AEHEAAGEKLTPGQQITAEVVSIAREWIFIDLGGKSEGAVAKAEFI---DQEGNCTVAVG 65 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE 298 D++TV L ++ + K G + + Y G + G V G V I Sbjct: 66 DKVTVYFLAEKKQEKLFTT--KVGGAATQAHLEEAYHSGIPVEGTVEAEGKGGFQVRISG 123 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVN----VGDVVEVMVLDIDEERRRISLG----LKQCK 350 V S+M +V N +G +++ E R I L L++ + Sbjct: 124 NVRAFCPFSQMAL-------RRVENNEEYLGQGFAFKIIEFREGGRNIILSRRRLLEEER 176 Query: 351 ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYK 410 A ++ ++ GD+V G + S+ FG F+ + GGI+GL+ +S+I W E+ + Sbjct: 177 AARKEELRQSLAVGDKVTGTVTSVQKFGAFVDI-GGIEGLIPMSEIGWGTV-EDIHSHLE 234 Query: 411 KGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVEL 470 G E+ VV +D E+ER SL +K DP+ A +G+ GKV + GA V L Sbjct: 235 PGREVEVVVKSLDWEKERYSLSLKDTLPDPWEGVAARFPEGSRHQGKVARLMDFGAFVTL 294 Query: 471 ADGVEGYLRASE-ASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEAD 526 A G++G + S+ + R+ V+ G+ +E + +D + R +SLSV E++ Sbjct: 295 APGIDGLVHISKLGAGRRINHPREVVQPGETLEVEIEAIDSERRRLSLSVPPPAESE 351 >UniRef50_A1AM10 SSU ribosomal protein S1P n=10 Tax=Desulfuromonadales RepID=A1AM10_PELPD Length = 407 Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 119/341 (34%), Positives = 193/341 (56%), Gaps = 5/341 (1%) Query: 5 FAQLFEESL--KEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEI 62 FAQLFEES K PG + V+ + + V +D G K E I ++F + +G + Sbjct: 20 FAQLFEESCSRKGGWLEPGQKLDVRVLKVSAEWVFIDCGQKGEGVIDRKEFLDQEGNCTV 79 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 + GD + + G E + LE A++ V G + ++KGG+ + Sbjct: 80 KEGDSISAYFLSSRQG--EMRFTTRLGGGAAGNAQLEAAWQSGVPVEGQVEQEIKGGYQI 137 Query: 123 EL-NGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 L + RAF P S + +R D L G L F++ + +K N+VVSRR ++E E Sbjct: 138 RLGSSTRAFCPFSQIALRRSDDHQSLVGSRLTFRITEYGEKGRNIVVSRRVLLEEEQQRM 197 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEI 241 R++ ++ EGM + G V +L D+GAFVD+GG++GL+ ++++ W RVK +E+++VG ++ Sbjct: 198 REEAWASISEGMTLDGTVSSLRDFGAFVDIGGLEGLVPLSEIGWSRVKDAAELLSVGQKV 257 Query: 242 TVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVE 301 V V D+ER R+SL +K+ DPW +A+++PEG+ +G V LT +G FV + G++ Sbjct: 258 QVVVKSLDQERNRISLSIKETLVDPWDQVAEQHPEGSFQSGTVARLTPFGAFVTLPCGLD 317 Query: 302 GLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRI 342 GL+H+S++ + HP +V++ G VEV V ID E RRI Sbjct: 318 GLIHISKLGGGKRISHPREVLSEGQAVEVKVEGIDRESRRI 358 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 70/222 (31%), Positives = 118/222 (53%), Gaps = 17/222 (7%) Query: 184 QLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 QL Q G+ V+G V+ G + LG + +A +R +V G +T Sbjct: 112 QLEAAWQSGVPVEGQVEQEIKGGYQIRLGSSTRAFCPFSQIALRRSDDHQSLV--GSRLT 169 Query: 243 VKVLKFDRERTRVSLGLKQL--------GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFV 294 ++ ++ + + + + L E+ W +I+ EG L G V++L D+G FV Sbjct: 170 FRITEYGEKGRNIVVSRRVLLEEEQQRMREEAWASIS----EGMTLDGTVSSLRDFGAFV 225 Query: 295 EIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPW 354 +I G+EGLV +SE+ W+ +++++VG V+V+V +D+ER RISL +K+ +PW Sbjct: 226 DIG-GLEGLVPLSEIGWSRVK-DAAELLSVGQKVQVVVKSLDQERNRISLSIKETLVDPW 283 Query: 355 QQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDI 396 Q AE H +G G + +T FG F+ L G+DGL+H+S + Sbjct: 284 DQVAEQHPEGSFQSGTVARLTPFGAFVTLPCGLDGLIHISKL 325 Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 53/155 (34%), Positives = 87/155 (56%), Gaps = 3/155 (1%) Query: 362 NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQ 421 ++G ++G + S+ DFG F+ + GG++GLV LS+I W+ ++A G ++ VV Sbjct: 206 SEGMTLDGTVSSLRDFGAFVDI-GGLEGLVPLSEIGWSRV-KDAAELLSVGQKVQVVVKS 263 Query: 422 VDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRAS 481 +D ER RISL +K+ DP++ + +G+ +G V + GA V L G++G + S Sbjct: 264 LDQERNRISLSIKETLVDPWDQVAEQHPEGSFQSGTVARLTPFGAFVTLPCGLDGLIHIS 323 Query: 482 E-ASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAI 515 + R+ VLS G VE K G+DR++R I Sbjct: 324 KLGGGKRISHPREVLSEGQAVEVKVEGIDRESRRI 358 >UniRef50_D1PP74 4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=8 Tax=Bacteria RepID=D1PP74_9FIRM Length = 639 Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 128/350 (36%), Positives = 203/350 (58%), Gaps = 14/350 (4%) Query: 9 FEESLKEIETRP---GSIVRGVVVAIDKD--VVLVDAGLKSESAIPAEQFK---NAQGEL 60 FEE L E +P G IV+ V+++ VV +D G K + + NA+ E Sbjct: 287 FEEMLAASEAKPLYAGKIVKAKVISVSPTECVVGID-GSKHTGVVTLREMSHDPNAKMED 345 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 ++V DE+D+ + D G LSR + + + + +A E+ + G + KGG Sbjct: 346 LVKVDDELDLVVVKTNDQEGVDTLSRVRFEAQKGMKDVAEAAENGTVMEGDVMEANKGGV 405 Query: 121 TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 V + G+R F+P S +R D L G+ ++ + + ++ +V S V N A Sbjct: 406 VVNVKGVRVFVPRSQATMRRDEDYTKLVGQHVKLVITECAGRK--IVGSINKVTAEANKA 463 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 +R++ N++ G + +G+VK+LT YGAFVD+GGVDGL HI++++W +KHPSE+VNVGDE Sbjct: 464 KREEFWANVEVGKKYQGVVKSLTSYGAFVDIGGVDGLCHISELSWSNIKHPSEVVNVGDE 523 Query: 241 ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV 300 I V V +D E +VSLG K+ ++PWV + P GT+ T V ++T +G FV I G+ Sbjct: 524 IEVYVKSYDPENQKVSLGYKKEEDNPWVKLENEVPVGTEFTAPVVSITKFGAFVRIMPGI 583 Query: 301 EGLVHVSEMDWTNKNIHP-SKVVNVGDVVEVMVLDIDEERRRISLGLKQC 349 +GLVH+SE+ +N+ ++ S V+ VGD V V + ++D +R+RISL +K C Sbjct: 584 DGLVHISEI--SNERVNKVSDVLKVGDEVRVKLTNVDFDRKRISLSMKAC 631 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 71/158 (44%), Positives = 96/158 (60%), Gaps = 3/158 (1%) Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDID 336 G K G V +LT YG FV+I GV+GL H+SE+ W+N HPS+VVNVGD +EV V D Sbjct: 475 GKKYQGVVKSLTSYGAFVDIG-GVDGLCHISELSWSNIK-HPSEVVNVGDEIEVYVKSYD 532 Query: 337 EERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDI 396 E +++SLG K+ + NPW + G + SIT FG F+ + GIDGLVH+S+I Sbjct: 533 PENQKVSLGYKKEEDNPWVKLENEVPVGTEFTAPVVSITKFGAFVRIMPGIDGLVHISEI 592 Query: 397 SWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVK 434 S N + K GDE+ + VD +R+RISL +K Sbjct: 593 S-NERVNKVSDVLKVGDEVRVKLTNVDFDRKRISLSMK 629 Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 64/168 (38%), Positives = 94/168 (55%), Gaps = 10/168 (5%) Query: 364 GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISW-NVAGEEAVREYKKGDEIAAVVLQV 422 G + +G +KS+T +G F+ + GG+DGL H+S++SW N+ V GDEI V Sbjct: 475 GKKYQGVVKSLTSYGAFVDI-GGVDGLCHISELSWSNIKHPSEV--VNVGDEIEVYVKSY 531 Query: 423 DAERERISLGVKQLAEDPFNNWVALNKK---GAIVTGKVTAVDAKGATVELADGVEGYLR 479 D E +++SLG K+ ++P WV L + G T V ++ GA V + G++G + Sbjct: 532 DPENQKVSLGYKKEEDNP---WVKLENEVPVGTEFTAPVVSITKFGAFVRIMPGIDGLVH 588 Query: 480 ASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADE 527 SE S +RV + VL VGDEV K T VD + ISLS++A DE Sbjct: 589 ISEISNERVNKVSDVLKVGDEVRVKLTNVDFDRKRISLSMKACLNEDE 636 >UniRef50_D0LLG7 RNA binding S1 domain protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LLG7_HALO1 Length = 410 Score = 195 bits (495), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 127/366 (34%), Positives = 210/366 (57%), Gaps = 22/366 (6%) Query: 3 ESFAQLFEESLKEIET-------RP--GSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQF 53 E FA L + KE RP G V G VV++ + V K+E+ + +Q Sbjct: 8 EDFAALLDAFEKEHSADEKPGRKRPQVGDTVTGQVVSVGSEAAFVQVDGKTEAFLGLDQI 67 Query: 54 KNAQGELEIQVGDEVDVALDAVEDGFG--ETLLSREKAKRH--EAWITLEKAYEDAETVT 109 + GE+ +Q GD V+ + + T+++ ++ H +A LE+A+ V Sbjct: 68 TDENGEILVQEGDTVEARIVEMRGDMPVLRTVVAGGRSAGHGPDAVAELEQAHAHGLPVE 127 Query: 110 GVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLD--QKRNNVV 167 G I KGG V++ G+R F P S + V D GK+L F++ +L+ +K+ N+V Sbjct: 128 GQITAVNKGGVEVQVGGVRGFCPISQLSDSFVEDAGEYVGKKLSFRITRLETSRKQANLV 187 Query: 168 VSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKR 227 +SRRA++E +A + L+EG+ ++G V ++ +GAFVD+GG++G++H++++ + R Sbjct: 188 LSRRALLEEAKAAIAAETRARLREGVTIRGTVTSMKPFGAFVDIGGLEGMIHVSELGFGR 247 Query: 228 VKHPSEIVNVGDEITVKVLKFD-------RERTRVSLGLKQLGEDPWVAIAKRYPEGTKL 280 V HP ++++VG E+ V+VL+ + + R R++L +K L +DPW AI +RY G + Sbjct: 248 VDHPEDVLHVGQEVDVQVLRIEETRDKDAKRRERIALSMKALADDPWDAIEQRYGNGGQA 307 Query: 281 TGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERR 340 GRV L +G F+EIE G+EGL H+S++ + HP +V+ VGD VEV VL ++ ERR Sbjct: 308 KGRVVRLQPFGAFIEIEPGIEGLAHISQLGAGRRIQHPREVLKVGDEVEVNVLGVERERR 367 Query: 341 RISLGL 346 RISL + Sbjct: 368 RISLSI 373 Score = 104 bits (260), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 60/168 (35%), Positives = 94/168 (55%), Gaps = 9/168 (5%) Query: 273 RYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMV 332 R EG + G VT++ +G FV+I G+EG++HVSE+ + + HP V++VG V+V V Sbjct: 208 RLREGVTIRGTVTSMKPFGAFVDIG-GLEGMIHVSELGFGRVD-HPEDVLHVGQEVDVQV 265 Query: 333 LDIDE-------ERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDG 385 L I+E R RI+L +K +PW + + G + +G++ + FG FI ++ Sbjct: 266 LRIEETRDKDAKRRERIALSMKALADDPWDAIEQRYGNGGQAKGRVVRLQPFGAFIEIEP 325 Query: 386 GIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGV 433 GI+GL H+S + + K GDE+ VL V+ ER RISL + Sbjct: 326 GIEGLAHISQLGAGRRIQHPREVLKVGDEVEVNVLGVERERRRISLSI 373 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 55/167 (32%), Positives = 90/167 (53%), Gaps = 12/167 (7%) Query: 362 NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWN-VAGEEAVREYKKGDEIAAVVL 420 +G + G + S+ FG F+ + GG++G++H+S++ + V E V G E+ VL Sbjct: 210 REGVTIRGTVTSMKPFGAFVDI-GGLEGMIHVSELGFGRVDHPEDV--LHVGQEVDVQVL 266 Query: 421 QVD-------AERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADG 473 +++ RERI+L +K LA+DP++ G G+V + GA +E+ G Sbjct: 267 RIEETRDKDAKRRERIALSMKALADDPWDAIEQRYGNGGQAKGRVVRLQPFGAFIEIEPG 326 Query: 474 VEGYLRASE-ASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSV 519 +EG S+ + R++ VL VGDEVE GV+R+ R ISLS+ Sbjct: 327 IEGLAHISQLGAGRRIQHPREVLKVGDEVEVNVLGVERERRRISLSI 373 >UniRef50_UPI00017435B0 LytB protein n=1 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI00017435B0 Length = 413 Score = 195 bits (495), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 114/390 (29%), Positives = 217/390 (55%), Gaps = 13/390 (3%) Query: 143 DTLHLE---GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQE-GMEVKGI 198 D LH G E+ K+I+ D ++N + +S + + E A EN G V+ + Sbjct: 21 DNLHERYKIGDEVTAKIIEKDVEKNRLKLSIKQLSEDPWIA-----FENSHNVGDVVEAV 75 Query: 199 VKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLG 258 VK++ D+G V + G G +H++++AW + GD+ + K+++ + E+ V L Sbjct: 76 VKDVLDFGIVVTVDGNSGFVHVSELAWHNGSKELKNYKAGDKFSAKIIQIENEKKNVKLS 135 Query: 259 LKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHP 318 +KQL E+PW + ++Y G + +T + D+G + +E+ ++GL+HVS++ + ++ Sbjct: 136 VKQLSENPWNTVKEKYHIGDIIEKPITEVFDFGLLISLEKDIDGLLHVSDLSYKRESNLT 195 Query: 319 SKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFG 378 SK GD+++ ++D ++E+ R++L +K + W ET++ +GK+ ++ D+G Sbjct: 196 SK-YKAGDLIKFKIVDFNDEKNRVTLSVKALLDDKWDVLEETYDFDKSYKGKVMNVQDYG 254 Query: 379 IFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAE 438 IF+ L+ GI+ +H ++ SW+ + +EYK GDE+ V+ +D +++S +KQL + Sbjct: 255 IFVELEKGIEVFIHKNEFSWD---KREHKEYKVGDEVEFKVIVIDKIEKKLSGSIKQLEK 311 Query: 439 DPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVG 498 P+ KKG IV ++ + A V+L D G + E + D ++D + SVG Sbjct: 312 SPWKEVTEKYKKGNIVNTEIVEIQENFALVKLTDRFNGIVPKRELTEDFLKDISEKFSVG 371 Query: 499 DEVEAKFTGVDRKNRAISLSVRAKDEADEK 528 D+VEA T ++ K ++I+LS++ E +EK Sbjct: 372 DKVEAVITDINEKRKSIALSLKKVQEMEEK 401 Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 110/341 (32%), Positives = 180/341 (52%), Gaps = 8/341 (2%) Query: 209 VDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWV 268 +DLG G +HI++++W +V + E +GDE+T K+++ D E+ R+ L +KQL EDPW+ Sbjct: 1 MDLGAASGFVHISEVSWDQVDNLHERYKIGDEVTAKIIEKDVEKNRLKLSIKQLSEDPWI 60 Query: 269 AIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVV 328 A + G + V ++ D+G V ++ G G VHVSE+ W N + K GD Sbjct: 61 AFENSHNVGDVVEAVVKDVLDFGIVVTVD-GNSGFVHVSELAWHNGS-KELKNYKAGDKF 118 Query: 329 EVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGID 388 ++ I+ E++ + L +KQ NPW E ++ GD +E I + DFG+ I L+ ID Sbjct: 119 SAKIIQIENEKKNVKLSVKQLSENPWNTVKEKYHIGDIIEKPITEVFDFGLLISLEKDID 178 Query: 389 GLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALN 448 GL+H+SD+S+ +YK GD I ++ + E+ R++L VK L +D ++ Sbjct: 179 GLLHVSDLSYKRESN-LTSKYKAGDLIKFKIVDFNDEKNRVTLSVKALLDDKWDVLEETY 237 Query: 449 KKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGV 508 GKV V G VEL G+E ++ +E S D+ E VGDEVE K + Sbjct: 238 DFDKSYKGKVMNVQDYGIFVELEKGIEVFIHKNEFSWDKREHKEY--KVGDEVEFKVIVI 295 Query: 509 DRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAE 549 D+ + +S S++ +++ K+ K + N N + E Sbjct: 296 DKIEKKLSGSIKQLEKSPWKEV---TEKYKKGNIVNTEIVE 333 >UniRef50_B0KVD5 30S ribosomal protein S1 n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVD5_9BACT Length = 414 Score = 194 bits (494), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 115/358 (32%), Positives = 201/358 (56%), Gaps = 26/358 (7%) Query: 8 LFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE-IQVGD 66 L ++ L+ + R G +V GVVV + + +LVD G KSE I + A + IQVG+ Sbjct: 18 LTDKDLQMKQFRLGDMVEGVVVNVSHEEILVDIGAKSEGIITRLELSEADKSYKNIQVGE 77 Query: 67 EVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNG 126 ++ + E+ G +LS +KA++ + W E+A+E + + KGG + G Sbjct: 78 KITAKVVQTENAQGYVVLSLKKAEKDKKWQDAEEAFEKGLIIDATVIEYNKGGLLCDSLG 137 Query: 127 IRAFLPGSLVDV---------------RPVRDTLH-LEGKELEFKVIKLDQKRNNVVVSR 170 +R F+P S +D ++++L L GK L KVI++D+++N V+S Sbjct: 138 LRGFIPLSHLDRVHFANDVAKFAAGSEAELKESLKILSGKTLRVKVIEIDKEKNRFVLSE 197 Query: 171 RAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKH 230 + + + + R + L ++ G V+GIV + +G FVDL GV+GL+HI+++AW++V H Sbjct: 198 KDALATYSEESRKKRLSEIKIGSTVEGIVTGIMPFGVFVDLDGVEGLVHISEIAWEKVSH 257 Query: 231 PSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDY 290 PS VG +I V VL D E +++L +K+L +PW + ++YP GTK+TG V+ + + Sbjct: 258 PSNYFKVGQKIKVMVLGVDEESNKLALSVKKLIPNPWETVEEKYPVGTKVTGVVSKIVPF 317 Query: 291 GCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQ 348 G FV +E+G++GL+H+SE + K G+ V +V+ +D E ++++L ++ Sbjct: 318 GAFVTLEKGLDGLIHISEAEAPLKE---------GETVSAVVIQVDGENQKLALSTRE 366 Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 99/320 (30%), Positives = 168/320 (52%), Gaps = 49/320 (15%) Query: 149 GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLT--DY- 205 G+++ KV++ + + VV+S + AE+D+ ++ +E E KG++ + T +Y Sbjct: 76 GEKITAKVVQTENAQGYVVLSLK-------KAEKDKKWQDAEEAFE-KGLIIDATVIEYN 127 Query: 206 --GAFVDLGGVDGLLHITDMAWKRVKHPSEIVNV----------------GDEITVKVLK 247 G D G+ G + ++ + RV +++ G + VKV++ Sbjct: 128 KGGLLCDSLGLRGFIPLSHL--DRVHFANDVAKFAAGSEAELKESLKILSGKTLRVKVIE 185 Query: 248 FDRERTRVSLGLKQ-LGEDPWVAIAKRYPE---GTKLTGRVTNLTDYGCFVEIEEGVEGL 303 D+E+ R L K L + KR E G+ + G VT + +G FV+++ GVEGL Sbjct: 186 IDKEKNRFVLSEKDALATYSEESRKKRLSEIKIGSTVEGIVTGIMPFGVFVDLD-GVEGL 244 Query: 304 VHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNK 363 VH+SE+ W K HPS VG ++VMVL +DEE +++L +K+ NPW+ E + Sbjct: 245 VHISEIAW-EKVSHPSNYFKVGQKIKVMVLGVDEESNKLALSVKKLIPNPWETVEEKYPV 303 Query: 364 GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVD 423 G +V G + I FG F+ L+ G+DGL+H+S EA K+G+ ++AVV+QVD Sbjct: 304 GTKVTGVVSKIVPFGAFVTLEKGLDGLIHIS---------EAEAPLKEGETVSAVVIQVD 354 Query: 424 AERERISLGVKQLAEDPFNN 443 E ++++L + E F+N Sbjct: 355 GENQKLALSTR---EHNFDN 371 Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 105/387 (27%), Positives = 181/387 (46%), Gaps = 40/387 (10%) Query: 176 SENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEI 234 S+ ++D ++ + G V+G+V N++ VD+G +G+ IT + + Sbjct: 15 SKYLTDKDLQMKQFRLGDMVEGVVVNVSHEEILVDIGAKSEGI--ITRLELSEADKSYKN 72 Query: 235 VNVGDEITVKVLKFDRERTRVSLGLKQLGEDP-WVAIAKRYPEGTKLTGRVTNLTDYGCF 293 + VG++IT KV++ + + V L LK+ +D W + + +G + V G Sbjct: 73 IQVGEKITAKVVQTENAQGYVVLSLKKAEKDKKWQDAEEAFEKGLIIDATVIEYNKGGLL 132 Query: 294 VEIEEGVEGLVHVSEMDWTN-------------KNIHPSKVVNVGDVVEVMVLDIDEERR 340 + G+ G + +S +D + + S + G + V V++ID+E+ Sbjct: 133 CD-SLGLRGFIPLSHLDRVHFANDVAKFAAGSEAELKESLKILSGKTLRVKVIEIDKEKN 191 Query: 341 RISLGLKQCKANPWQQFAETHNK--------GDRVEGKIKSITDFGIFIGLDGGIDGLVH 392 R L K A ++E K G VEG + I FG+F+ LDG ++GLVH Sbjct: 192 RFVLSEKDALAT----YSEESRKKRLSEIKIGSTVEGIVTGIMPFGVFVDLDG-VEGLVH 246 Query: 393 LSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGA 452 +S+I+W + +K G +I +VL VD E +++L VK+L +P+ G Sbjct: 247 ISEIAWEKVSHPS-NYFKVGQKIKVMVLGVDEESNKLALSVKKLIPNPWETVEEKYPVGT 305 Query: 453 IVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKN 512 VTG V+ + GA V L G++G + SEA L G+ V A VD +N Sbjct: 306 KVTGVVSKIVPFGAFVTLEKGLDGLIHISEAEAP--------LKEGETVSAVVIQVDGEN 357 Query: 513 RAISLSVRAKDEADEKDAIATVNKQED 539 + ++LS R + +EKD + +K +D Sbjct: 358 QKLALSTREHNFDNEKDKVKEKSKDKD 384 >UniRef50_A9KLR6 Hydroxymethylbutenyl pyrophosphate reductase n=58 Tax=Bacteria RepID=A9KLR6_CLOPH Length = 643 Score = 192 bits (487), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 111/349 (31%), Positives = 203/349 (58%), Gaps = 12/349 (3%) Query: 4 SFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQ 63 SF QL EESL I G +V G V+ + +D ++++ G K++ + ++ N Q ++++ Sbjct: 288 SFEQLLEESLVTIHN--GEVVDGTVIRVKEDEIVLNIGYKADGILTRNEYTN-QPNVDLR 344 Query: 64 V----GDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGG 119 GD + V + V DG G+ LL+ ++ + LE+A+ + E + + + GG Sbjct: 345 TVANEGDTMTVKVLKVNDGEGQVLLTYKRLAAEKGSKRLEEAFNNKEVLKAKVAAVLDGG 404 Query: 120 FTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 +V ++ R F+P SL ++ + +E+EF + + + KR ++ R+ ++ ++ Sbjct: 405 LSVIVDEARIFIPASLASDTYEKNLDKFKDQEIEFVISEFNPKRRRIIGDRKQLLVAKKQ 464 Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGD 239 L ++ G V+G VKN+TD+GAF+DLGG DGLLHI++M+W R++ P ++ VGD Sbjct: 465 ELSKALFAKIKVGDVVEGTVKNVTDFGAFIDLGGADGLLHISEMSWGRIESPKKVFKVGD 524 Query: 240 EITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEG 299 TVK D + +++L LK ++PW +++Y G +TGRV +T++G FVE+E G Sbjct: 525 --TVKAFIKDIQGEKIALSLKFPEQNPWANASEKYAVGNVVTGRVARMTEFGAFVELEPG 582 Query: 300 VEGLVHVSEMDWTNKNIH-PSKVVNVGDVVEVMVLDIDEERRRISLGLK 347 V+ L+HVS++ + ++I P+ + +G V V+D + + ++ISL +K Sbjct: 583 VDALLHVSQI--SKEHIEKPADALKIGQEVTAKVVDFNNDEKKISLSIK 629 Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 106/351 (30%), Positives = 169/351 (48%), Gaps = 24/351 (6%) Query: 183 DQLLE----NLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNV 237 +QLLE + G V G V + + +++G DG+L + + + N Sbjct: 290 EQLLEESLVTIHNGEVVDGTVIRVKEDEIVLNIGYKADGILTRNEYTNQPNVDLRTVANE 349 Query: 238 GDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTK----LTGRVTNLTDYGCF 293 GD +TVKVLK + +V L K+L + +KR E L +V + D G Sbjct: 350 GDTMTVKVLKVNDGEGQVLLTYKRLAAEKG---SKRLEEAFNNKEVLKAKVAAVLDGGLS 406 Query: 294 VEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP 353 V ++E + D KN+ K +E ++ + + +RRRI KQ Sbjct: 407 VIVDEARIFIPASLASDTYEKNLDKFK----DQEIEFVISEFNPKRRRIIGDRKQLLVAK 462 Query: 354 WQQFAETH----NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREY 409 Q+ ++ GD VEG +K++TDFG FI L GG DGL+H+S++SW E + + Sbjct: 463 KQELSKALFAKIKVGDVVEGTVKNVTDFGAFIDL-GGADGLLHISEMSWGRI-ESPKKVF 520 Query: 410 KKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVE 469 K GD + A + D + E+I+L +K ++P+ N G +VTG+V + GA VE Sbjct: 521 KVGDTVKAFIK--DIQGEKIALSLKFPEQNPWANASEKYAVGNVVTGRVARMTEFGAFVE 578 Query: 470 LADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 L GV+ L S+ S++ +E L +G EV AK + + ISLS++ Sbjct: 579 LEPGVDALLHVSQISKEHIEKPADALKIGQEVTAKVVDFNNDEKKISLSIK 629 >UniRef50_Q7X2Y7 Putative 30S ribosomal protein S1 (Fragment) n=1 Tax=uncultured Acidobacteria bacterium RepID=Q7X2Y7_9BACT Length = 318 Score = 191 bits (484), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 93/218 (42%), Positives = 143/218 (65%), Gaps = 4/218 (1%) Query: 224 AW-KRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTG 282 +W KRVKHPS++VN GD + V+VL D + R+SLG+KQ+ ++PW + +RY GT++ G Sbjct: 1 SWSKRVKHPSKLVNPGDTVEVEVLSVDPKARRISLGMKQIQDNPWQTLHERYQVGTRVHG 60 Query: 283 RVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRI 342 RV NLTD+G F+EIE+GV+GLVHVS++ W+ + HPS+V+ G ++ ++ ID E RR+ Sbjct: 61 RVRNLTDFGAFIEIEDGVDGLVHVSDISWSRRIKHPSEVLKKGQEIDAVITSIDAENRRL 120 Query: 343 SLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDIS-WNVA 401 SL +K + N W +F H GD V GKI +FG F+ LD ++GL H+S++S V Sbjct: 121 SLSIKDLEPNAWDRFLTEHKPGDVVRGKIARFANFGAFVELDDNLEGLCHISELSDERVE 180 Query: 402 GEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAED 439 E V + G E+ +L++D E ++I L + + +D Sbjct: 181 KPEDVVQL--GQEMEFKILRIDVESKKIGLSARSVGKD 216 Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 95/217 (43%), Positives = 137/217 (63%) Query: 311 WTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGK 370 W+ + HPSK+VN GD VEV VL +D + RRISLG+KQ + NPWQ E + G RV G+ Sbjct: 2 WSKRVKHPSKLVNPGDTVEVEVLSVDPKARRISLGMKQIQDNPWQTLHERYQVGTRVHGR 61 Query: 371 IKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERIS 430 ++++TDFG FI ++ G+DGLVH+SDISW+ + KKG EI AV+ +DAE R+S Sbjct: 62 VRNLTDFGAFIEIEDGVDGLVHVSDISWSRRIKHPSEVLKKGQEIDAVITSIDAENRRLS 121 Query: 431 LGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVED 490 L +K L + ++ ++ +K G +V GK+ GA VEL D +EG SE S +RVE Sbjct: 122 LSIKDLEPNAWDRFLTEHKPGDVVRGKIARFANFGAFVELDDNLEGLCHISELSDERVEK 181 Query: 491 ATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADE 527 V+ +G E+E K +D +++ I LS R+ + DE Sbjct: 182 PEDVVQLGQEMEFKILRIDVESKKIGLSARSVGKDDE 218 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 1/125 (0%) Query: 397 SWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTG 456 SW+ + + GD + VL VD + RISLG+KQ+ ++P+ + G V G Sbjct: 1 SWSKRVKHPSKLVNPGDTVEVEVLSVDPKARRISLGMKQIQDNPWQTLHERYQVGTRVHG 60 Query: 457 KVTAVDAKGATVELADGVEGYLRASEAS-RDRVEDATLVLSVGDEVEAKFTGVDRKNRAI 515 +V + GA +E+ DGV+G + S+ S R++ + VL G E++A T +D +NR + Sbjct: 61 RVRNLTDFGAFIEIEDGVDGLVHVSDISWSRRIKHPSEVLKKGQEIDAVITSIDAENRRL 120 Query: 516 SLSVR 520 SLS++ Sbjct: 121 SLSIK 125 Score = 61.6 bits (148), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 44/179 (24%), Positives = 90/179 (50%), Gaps = 13/179 (7%) Query: 94 AWITLEKAYEDAETVTGVINGKVKGGFTVEL-NGIRAFLPGSLVDVRPVRDTLHL----- 147 W TL + Y+ V G + G +E+ +G+ + + D+ R H Sbjct: 44 PWQTLHERYQVGTRVHGRVRNLTDFGAFIEIEDGVDGLV--HVSDISWSRRIKHPSEVLK 101 Query: 148 EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGA 207 +G+E++ + +D + + +S I+ D+ L + G V+G + ++GA Sbjct: 102 KGQEIDAVITSIDAENRRLSLS----IKDLEPNAWDRFLTEHKPGDVVRGKIARFANFGA 157 Query: 208 FVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGED 265 FV+L ++GL HI++++ +RV+ P ++V +G E+ K+L+ D E ++ L + +G+D Sbjct: 158 FVELDDNLEGLCHISELSDERVEKPEDVVQLGQEMEFKILRIDVESKKIGLSARSVGKD 216 >UniRef50_C5NX49 30S ribosomal protein S1 n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NX49_9BACL Length = 402 Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 125/370 (33%), Positives = 199/370 (53%), Gaps = 27/370 (7%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVD-AGLKSESAIPAEQ-----FK 54 MT SF +L S + G V G V ID D V VD AG + + I Q F+ Sbjct: 1 MTTSFEELLNSSEM---LKKGDKVTGTVSKIDNDKVYVDVAGAQYDCVILRNQITRKPFE 57 Query: 55 NAQGELEIQVGDEVDVALDAV--------EDGFGETLLSREKAKRHE-------AWITLE 99 N + L VGDEV+ + + ED G LS + + E +W + Sbjct: 58 NIEDVL--SVGDEVEAQVTGIRADREKRSEDVPGVIYLSHKILENAEYKKLMELSWAGII 115 Query: 100 KAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKL 159 + +E+ E + ++G+ KGG ++ G+RAF+PGS +D + +D G E FK+ ++ Sbjct: 116 EKFENGELIQATVSGQTKGGLLADVEGLRAFIPGSYIDTKFRKDLSKFVGNEYTFKIEEV 175 Query: 160 DQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLH 219 D+ +N ++++RR ++E E + + ++ N+ EG ++G V +TD+GAFV++G VDGLLH Sbjct: 176 DKSKNKIILNRRVILEEEKAKKLAEVYGNINEGDVIEGKVSRITDFGAFVNIGEVDGLLH 235 Query: 220 ITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTK 279 I++++ RV+ +++++VGD I V V+ D+E +VSL K L W G Sbjct: 236 ISEISHARVEKVADVLSVGDTIKVAVIAVDKENEKVSLSAKTLLPTQWEVARATIKAGDA 295 Query: 280 LTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEER 339 L G V N T +G FVE+ VEGLVH+S++ + + V+ GD V V VL+ D E Sbjct: 296 LEGVVRNTTAFGAFVEVLPDVEGLVHISQISH-ERVTNVEDVLKKGDKVNVKVLEFDFEN 354 Query: 340 RRISLGLKQC 349 R+SL +K+ Sbjct: 355 ERLSLSIKEL 364 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 105/356 (29%), Positives = 174/356 (48%), Gaps = 28/356 (7%) Query: 187 ENLQEGMEVKGIVKNLTDYGAFVDLGGV--DGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 E L++G +V G V + + +VD+ G D ++ + K ++ ++++VGDE+ + Sbjct: 13 EMLKKGDKVTGTVSKIDNDKVYVDVAGAQYDCVILRNQITRKPFENIEDVLSVGDEVEAQ 72 Query: 245 V--LKFDRERTR------VSLG--------LKQLGEDPWVAIAKRYPEGTKLTGRVTNLT 288 V ++ DRE+ + L K+L E W I +++ G + V+ T Sbjct: 73 VTGIRADREKRSEDVPGVIYLSHKILENAEYKKLMELSWAGIIEKFENGELIQATVSGQT 132 Query: 289 DYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLG--- 345 G ++E G+ + S +D T SK V G+ + ++D+ + +I L Sbjct: 133 KGGLLADVE-GLRAFIPGSYID-TKFRKDLSKFV--GNEYTFKIEEVDKSKNKIILNRRV 188 Query: 346 -LKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEE 404 L++ KA + N+GD +EGK+ ITDFG F+ + G +DGL+H+S+IS + E+ Sbjct: 189 ILEEEKAKKLAEVYGNINEGDVIEGKVSRITDFGAFVNI-GEVDGLLHISEIS-HARVEK 246 Query: 405 AVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAK 464 GD I V+ VD E E++SL K L + A K G + G V A Sbjct: 247 VADVLSVGDTIKVAVIAVDKENEKVSLSAKTLLPTQWEVARATIKAGDALEGVVRNTTAF 306 Query: 465 GATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 GA VE+ VEG + S+ S +RV + VL GD+V K D +N +SLS++ Sbjct: 307 GAFVEVLPDVEGLVHISQISHERVTNVEDVLKKGDKVNVKVLEFDFENERLSLSIK 362 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 68/274 (24%), Positives = 119/274 (43%), Gaps = 41/274 (14%) Query: 276 EGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNI-HPSKVVNVGDVVEVMVLD 334 +G K+TG V+ + + +V++ G + + T K + V++VGD VE V Sbjct: 17 KGDKVTGTVSKIDNDKVYVDVA-GAQYDCVILRNQITRKPFENIEDVLSVGDEVEAQVTG 75 Query: 335 I--DEERRR------ISLG--------LKQCKANPWQQFAETHNKGDRVEGKIKSITDFG 378 I D E+R I L K+ W E G+ ++ + T G Sbjct: 76 IRADREKRSEDVPGVIYLSHKILENAEYKKLMELSWAGIIEKFENGELIQATVSGQTKGG 135 Query: 379 IFIGLDGGIDGLVHLSDISWNVAGEEAVREYKK------GDEIAAVVLQVDAERERISLG 432 + ++G + + G +++K G+E + +VD + +I L Sbjct: 136 LLADVEG----------LRAFIPGSYIDTKFRKDLSKFVGNEYTFKIEEVDKSKNKIILN 185 Query: 433 VKQLAEDPFNNWVA-----LNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDR 487 + + E+ +A +N+ G ++ GKV+ + GA V + + V+G L SE S R Sbjct: 186 RRVILEEEKAKKLAEVYGNINE-GDVIEGKVSRITDFGAFVNIGE-VDGLLHISEISHAR 243 Query: 488 VEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRA 521 VE VLSVGD ++ VD++N +SLS + Sbjct: 244 VEKVADVLSVGDTIKVAVIAVDKENEKVSLSAKT 277 >UniRef50_C1DT56 Ribosomal protein S01 n=3 Tax=Sulfurihydrogenibium RepID=C1DT56_SULAA Length = 573 Score = 188 bits (478), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 155/519 (29%), Positives = 279/519 (53%), Gaps = 20/519 (3%) Query: 5 FAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQV 64 F +L EES + ++G VV + +D V VD G K E+ + N + +++ Sbjct: 4 FEKLMEESKESGFYSKNQKIKGKVVKVTEDKVFVDIGQKIEAVL------NRNEDQDVEE 57 Query: 65 GDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL 124 G E++ D G +LSR E L+ A+E+ + V I K G+TV + Sbjct: 58 GQEIEAVFTGKRDKDGYFILSRRGIVNKEKLQKLKDAFENKKKVKATILSKQDKGYTVSV 117 Query: 125 NGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQK-RN-NVVVSRRAVIESENSAER 182 G R F+P S ++ RD EG E ++K +++ RN N+V+SR+ + E E+ Sbjct: 118 EGFRGFMPLSESSLK--RDENLPEGFTFEAYIVKFEERGRNPNIVISRKQALIEEKELEK 175 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSEIVNVGDEI 241 +++L L+EG +VK V + GA + + V G L ++++W + + E++ VGDE+ Sbjct: 176 EKILSLLKEGQKVKAKVVKVQPNGAVLSIEDVLYGFLPKSEISWDKSRKVEEVLKVGDEV 235 Query: 242 TVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVE 301 V V+K +++ + L LK L +PW K G + ++ ++ G V++ +E Sbjct: 236 EV-VVKEIKDKKPI-LSLKLLEGNPWDKFDKNI--GDVVEVKIKDINKGGLVVDLG-LLE 290 Query: 302 GLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETH 361 G + SE+ + + K + VGD V + +ID+E+ ++ L +KQ + NP ++F + + Sbjct: 291 GFIPNSEISHFD-YVKAKKNLKVGDTVVAKIFEIDKEKGKVKLSIKQAQENPLEKFLKEN 349 Query: 362 NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQ 421 G ++ K+K + F+ L G I+G+V L D++ N + + K+ VL Sbjct: 350 PVGSVIQAKVKDVKQKVAFVDL-GDIEGIVKLQDVTDNPSIKSISSLLKEDKTYRFKVLG 408 Query: 422 VDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRAS 481 + E++++ LG+KQL +D FN++V+ +K G +V GKV + KGA V++ D +EG++ S Sbjct: 409 I--EKDKVVLGIKQLLDDAFNDFVSKHKVGDVVKGKVKKLIEKGAFVDITDEIEGFIPVS 466 Query: 482 EASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 E S++R++ + LS+ EVEAK +D +N+ I+LS++ Sbjct: 467 EISKERIKIPSDKLSLHQEVEAKIIKIDTQNKKITLSIK 505 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 67/261 (25%), Positives = 137/261 (52%), Gaps = 14/261 (5%) Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 D+ +N+ + +EVK +K++ G VDLG ++G + ++++ + + VGD + Sbjct: 260 DKFDKNIGDVVEVK--IKDINKGGLVVDLGLLEGFIPNSEISHFDYVKAKKNLKVGDTVV 317 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 K+ + D+E+ +V L +KQ E+P K P G+ + +V ++ FV++ + +EG Sbjct: 318 AKIFEIDKEKGKVKLSIKQAQENPLEKFLKENPVGSVIQAKVKDVKQKVAFVDLGD-IEG 376 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHN 362 +V + ++ S ++ VL I E+ ++ LG+KQ + + F H Sbjct: 377 IVKLQDVTDNPSIKSISSLLKEDKTYRFKVLGI--EKDKVVLGIKQLLDDAFNDFVSKHK 434 Query: 363 KGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVR----EYKKGDEIAAV 418 GD V+GK+K + + G F+ + I+G + +S+IS +E ++ + E+ A Sbjct: 435 VGDVVKGKVKKLIEKGAFVDITDEIEGFIPVSEIS-----KERIKIPSDKLSLHQEVEAK 489 Query: 419 VLQVDAERERISLGVKQLAED 439 ++++D + ++I+L +KQL D Sbjct: 490 IIKIDTQNKKITLSIKQLILD 510 >UniRef50_D1BMA5 Hydroxymethylbutenyl pyrophosphate reductase n=3 Tax=Veillonella RepID=D1BMA5_VEIPT Length = 632 Score = 188 bits (477), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 113/348 (32%), Positives = 196/348 (56%), Gaps = 7/348 (2%) Query: 5 FAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQV 64 FA+L +E E + G++V G VV ++ + V G K+E+ + + E V Sbjct: 276 FAELLAAEGQE-EFKKGNVVEGTVVQVEDERAYVSFGYKTEAILNRTEISYPAPESAKDV 334 Query: 65 ---GDEVD-VALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 GDE+ V ++ +++ LS + + E W + +A E E + + G Sbjct: 335 LKNGDEIKAVIMNHIKED-NPIYLSMTRLAKDEDWQYVIEAQEKDEAIVCKGIDAIPAGL 393 Query: 121 TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 V + +R F+P S DV V+ +L G E E KV+++D+K+N +V+SRRAV+E E A Sbjct: 394 VVTVKSLRGFIPLSQGDVHFVKSLDNLVGTEFEAKVLEIDEKKNRLVLSRRAVLEVERQA 453 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 + + L+N+ G KGIV+ + YGAFVD+GG++GLLHI+D++W+++K ++++VG E Sbjct: 454 KLAEALKNINVGENYKGIVRKIMPYGAFVDIGGIEGLLHISDISWQKIKKVEDVLSVGQE 513 Query: 241 ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV 300 I VK+ FD E ++SL LK L + PW + G + G+V L YG FV + + + Sbjct: 514 IEVKLQSFDAESNKLSLSLKALSKSPWDVAEETLHVGDVINGKVVRLVAYGAFVAVNDDI 573 Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQ 348 +GL+H+S++ +N +N G VEV ++ ++++ +++ L L + Sbjct: 574 QGLLHISQIT-KQRNAKVEDYLNRGQEVEVKIISLNKDEKKLGLALTE 620 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 92/350 (26%), Positives = 173/350 (49%), Gaps = 18/350 (5%) Query: 187 ENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKV 245 E ++G V+G V + D A+V G + +L+ T++++ + +++ GDEI + Sbjct: 286 EEFKKGNVVEGTVVQVEDERAYVSFGYKTEAILNRTEISYPAPESAKDVLKNGDEIKAVI 345 Query: 246 LKFDRERTRVSLGLKQLGEDP-WVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLV 304 + +E + L + +L +D W + + + + + + G V ++ + G + Sbjct: 346 MNHIKEDNPIYLSMTRLAKDEDWQYVIEAQEKDEAIVCKGIDAIPAGLVVTVK-SLRGFI 404 Query: 305 HVSEMDWTNKNIHPSKVVN--VGDVVEVMVLDIDEERRRISLGLKQCKANPWQ-QFAETH 361 +S+ D +H K ++ VG E VL+IDE++ R+ L + Q + AE Sbjct: 405 PLSQGD-----VHFVKSLDNLVGTEFEAKVLEIDEKKNRLVLSRRAVLEVERQAKLAEAL 459 Query: 362 ---NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWN-VAGEEAVREYKKGDEIAA 417 N G+ +G ++ I +G F+ + GGI+GL+H+SDISW + E V G EI Sbjct: 460 KNINVGENYKGIVRKIMPYGAFVDI-GGIEGLLHISDISWQKIKKVEDVLSV--GQEIEV 516 Query: 418 VVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGY 477 + DAE ++SL +K L++ P++ G ++ GKV + A GA V + D ++G Sbjct: 517 KLQSFDAESNKLSLSLKALSKSPWDVAEETLHVGDVINGKVVRLVAYGAFVAVNDDIQGL 576 Query: 478 LRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADE 527 L S+ ++ R L+ G EVE K +++ + + L++ E+ E Sbjct: 577 LHISQITKQRNAKVEDYLNRGQEVEVKIISLNKDEKKLGLALTELMESKE 626 Score = 48.9 bits (115), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 7/176 (3%) Query: 359 ETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAV 418 E KG+ VEG + + D ++ + +++ ++IS+ A E A K GDEI AV Sbjct: 286 EEFKKGNVVEGTVVQVEDERAYVSFGYKTEAILNRTEISYP-APESAKDVLKNGDEIKAV 344 Query: 419 VLQVDAERERISLGVKQLAEDPFNNWV--ALNKKGAIVTGKVTAVDAKGATVELADGVEG 476 ++ E I L + +LA+D +V A K AIV + A+ A V + G Sbjct: 345 IMNHIKEDNPIYLSMTRLAKDEDWQYVIEAQEKDEAIVCKGIDAIPA--GLVVTVKSLRG 402 Query: 477 YLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIA 532 ++ S+ V+ +L VG E EAK +D K + LS RA E + + +A Sbjct: 403 FIPLSQGDVHFVK--SLDNLVGTEFEAKVLEIDEKKNRLVLSRRAVLEVERQAKLA 456 >UniRef50_C9LMR5 Hydroxymethylbutenyl pyrophosphate reductase/ribosomal protein S1 n=1 Tax=Dialister invisus DSM 15470 RepID=C9LMR5_9FIRM Length = 658 Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 108/349 (30%), Positives = 190/349 (54%), Gaps = 4/349 (1%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ-GE 59 + E ++ E+ ++ GS+V G VV + D + G K+E+ +P ++ + Sbjct: 288 IMEDMNEMLEQEEMNLDVHKGSVVEGKVVDLTDDKAWISFGYKTEAVLPLHEYSYPEPAS 347 Query: 60 LE--IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVK 117 L+ +QVGD + V + + +S+ K R W ++A++ E V +K Sbjct: 348 LKDVLQVGDSLRVQVVSSVKEDSTIFVSKIKVDRLADWDVAKEAFDKGEPVECEGIEAIK 407 Query: 118 GGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESE 177 G V+L +R F+P S D+R V L G++ + K++++D +N +V+SR+AV+E + Sbjct: 408 VGLLVQLKSLRGFIPLSQGDLRFVHSLQSLVGQKFKAKILEVDPTKNRLVLSRKAVLEEQ 467 Query: 178 NSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNV 237 + E D + + + G +KG VK + YGAFV L G++GLLHI+D++W+++ +++ Sbjct: 468 RTGELDVIEQAYENGEVLKGTVKKIMPYGAFVALNGIEGLLHISDVSWRKISKVEDVLQP 527 Query: 238 GDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE 297 I VK+ FDRE+ R+S K +PW K + + RV + ++G VE+E Sbjct: 528 EQVIDVKIKSFDREKQRISFSHKDCLPNPWETAVKDHEVDDIVGARVVKILEFGVIVELE 587 Query: 298 EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGL 346 +G+ GL+H++EM + N P + VGD + V ++ IDE R+RIS L Sbjct: 588 DGLTGLLHINEMT-QDHNKKPGDICRVGDDLTVRIIGIDEARKRISFSL 635 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 85/315 (26%), Positives = 152/315 (48%), Gaps = 26/315 (8%) Query: 132 PGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQE 191 P SL DV V D+L ++ V+ ++ + + VS+ I+ + A+ D E + Sbjct: 345 PASLKDVLQVGDSLRVQ-------VVSSVKEDSTIFVSK---IKVDRLADWDVAKEAFDK 394 Query: 192 G--MEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFD 249 G +E +GI G V L + G + ++ + V +V G + K+L+ D Sbjct: 395 GEPVECEGI--EAIKVGLLVQLKSLRGFIPLSQGDLRFVHSLQSLV--GQKFKAKILEVD 450 Query: 250 RERTRVSLGLKQLGEDPWVA----IAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVH 305 + R+ L K + E+ I + Y G L G V + YG FV + G+EGL+H Sbjct: 451 PTKNRLVLSRKAVLEEQRTGELDVIEQAYENGEVLKGTVKKIMPYGAFVALN-GIEGLLH 509 Query: 306 VSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGD 365 +S++ W K V+ V++V + D E++RIS K C NPW+ + H D Sbjct: 510 ISDVSW-RKISKVEDVLQPEQVIDVKIKSFDREKQRISFSHKDCLPNPWETAVKDHEVDD 568 Query: 366 RVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAE 425 V ++ I +FG+ + L+ G+ GL+H+++++ + ++ + GD++ ++ +D Sbjct: 569 IVGARVVKILEFGVIVELEDGLTGLLHINEMTQD-HNKKPGDICRVGDDLTVRIIGIDEA 627 Query: 426 RERISLGVKQLAEDP 440 R+RIS L E P Sbjct: 628 RKRISFS---LVEAP 639 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 80/348 (22%), Positives = 175/348 (50%), Gaps = 18/348 (5%) Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGD 239 E++++ ++ +G V+G V +LTD A++ G + +L + + ++ +++ VGD Sbjct: 297 EQEEMNLDVHKGSVVEGKVVDLTDDKAWISFGYKTEAVLPLHEYSYPEPASLKDVLQVGD 356 Query: 240 EITVKVLKFDRERTRV---SLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI 296 + V+V+ +E + + + + +L + W + + +G + G V++ Sbjct: 357 SLRVQVVSSVKEDSTIFVSKIKVDRLAD--WDVAKEAFDKGEPVECEGIEAIKVGLLVQL 414 Query: 297 EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLG----LKQCKAN 352 + + G + +S+ D + +H + + VG + +L++D + R+ L L++ + Sbjct: 415 K-SLRGFIPLSQGDL--RFVHSLQSL-VGQKFKAKILEVDPTKNRLVLSRKAVLEEQRTG 470 Query: 353 PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKG 412 + + G+ ++G +K I +G F+ L+G I+GL+H+SD+SW + V + + Sbjct: 471 ELDVIEQAYENGEVLKGTVKKIMPYGAFVALNG-IEGLLHISDVSWRKISK--VEDVLQP 527 Query: 413 DEIAAVVLQ-VDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELA 471 +++ V ++ D E++RIS K +P+ V ++ IV +V + G VEL Sbjct: 528 EQVIDVKIKSFDREKQRISFSHKDCLPNPWETAVKDHEVDDIVGARVVKILEFGVIVELE 587 Query: 472 DGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSV 519 DG+ G L +E ++D + + VGD++ + G+D + IS S+ Sbjct: 588 DGLTGLLHINEMTQDHNKKPGDICRVGDDLTVRIIGIDEARKRISFSL 635 >UniRef50_D2R2F1 RNA binding S1 domain protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R2F1_9PLAN Length = 502 Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 93/249 (37%), Positives = 152/249 (61%), Gaps = 6/249 (2%) Query: 110 GVINGKV----KGGFTVEL-NGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRN 164 G+++ K+ GG E+ G+R F+P S + V + L G+ + + + +++R Sbjct: 207 GLVDAKIVAANTGGLECEIAGGVRGFIPASQAGLYRVENLGDLVGQRITCVITEANERRG 266 Query: 165 NVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMA 224 NVV+SRRAV+E E + + +L+ ++ G +G+V+ + D+GAFVD+GG+DGL+HI+ M+ Sbjct: 267 NVVLSRRAVLEREKESAKKELMASIAIGDMREGVVRKIQDFGAFVDMGGIDGLIHISQMS 326 Query: 225 WKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRV 284 W R+KHPSEI+ G ++ V++ K D E ++ L L+ E PW I +++P G+ + G V Sbjct: 327 WDRIKHPSEILTEGQKVRVRIEKIDPETGKIGLSLRNQQEHPWTGIDQKFPVGSIVKGTV 386 Query: 285 TNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISL 344 + L +G FV++ GVEGL+H+SE+ N+ VV G VEV +L + E +RISL Sbjct: 387 SRLAAFGAFVKLSPGVEGLIHISELAH-NRVYAVQNVVKEGQEVEVKILTVSAEDQRISL 445 Query: 345 GLKQCKANP 353 LK P Sbjct: 446 SLKATLQAP 454 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 79/264 (29%), Positives = 134/264 (50%), Gaps = 23/264 (8%) Query: 276 EGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVV----EVM 331 EG + ++ G EI GV G + S+ +V N+GD+V + Sbjct: 205 EGGLVDAKIVAANTGGLECEIAGGVRGFIPASQAGLY-------RVENLGDLVGQRITCV 257 Query: 332 VLDIDEERRRISLG----LKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGI 387 + + +E R + L L++ K + ++ + GD EG ++ I DFG F+ + GGI Sbjct: 258 ITEANERRGNVVLSRRAVLEREKESAKKELMASIAIGDMREGVVRKIQDFGAFVDM-GGI 316 Query: 388 DGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVAL 447 DGL+H+S +SW+ + +G ++ + ++D E +I L ++ E P W + Sbjct: 317 DGLIHISQMSWDRI-KHPSEILTEGQKVRVRIEKIDPETGKIGLSLRNQQEHP---WTGI 372 Query: 448 NKK---GAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAK 504 ++K G+IV G V+ + A GA V+L+ GVEG + SE + +RV V+ G EVE K Sbjct: 373 DQKFPVGSIVKGTVSRLAAFGAFVKLSPGVEGLIHISELAHNRVYAVQNVVKEGQEVEVK 432 Query: 505 FTGVDRKNRAISLSVRAKDEADEK 528 V +++ ISLS++A +A K Sbjct: 433 ILTVSAEDQRISLSLKATLQAPAK 456 >UniRef50_D1AVV2 RNA binding S1 domain protein n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AVV2_STRM9 Length = 514 Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 141/520 (27%), Positives = 263/520 (50%), Gaps = 32/520 (6%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL 60 M +F ++ EE L E G + G ++ D + ++ K E I + + Sbjct: 1 MNNNFMEMLEEYLPTKEQNLGDKIEGTIIRKDNEFGYLNIQNKLEGRIRVSEIEG----- 55 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 ++GD+V V + D F ++S+ ++ EA+ ++K + ++G+I K+KGG+ Sbjct: 56 -FEIGDKVKVLVVKENDEF--LIVSKNILEKKEAFSNIKKG----DKISGIIKEKIKGGY 108 Query: 121 TVELNGIRAFLP--GSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 VE I+AFLP S ++ + + + G+ LEF V ++ R +V+SR +I+ EN Sbjct: 109 KVECGLIKAFLPFRSSGLNQQYIPN-----GELLEFDVT--EKNRKEIVISRLEIIK-EN 160 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVG 238 L L G ++ G + N DYG +DLG + GLLH ++++W + K + VG Sbjct: 161 EK---NFLNKLNLGDKITGTISNKLDYGMIIDLGTLSGLLHSSEISWNKEKTLKDFT-VG 216 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE 298 ++I VK+++ D+E ++ L +KQL E+PW+ I ++Y G + V + +G V++ + Sbjct: 217 EKIDVKIIELDKETKKIKLSIKQLVENPWLKIREKYHIGQNIDAPVKEVFSFGVVVDLGD 276 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFA 358 E L+HVS++ + K + K GDV+ V+DI++E+ +I L + W+ Sbjct: 277 R-EDLIHVSDL-YYKKIGNVEKEYKKGDVIFCEVIDINDEKEKIILSARTVFEKIWESLD 334 Query: 359 ETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAV 418 + D + K+ + DFG F D ++ V S+ SWN A + + K GD + Sbjct: 335 DFCLLNDIINIKVTRVKDFGFFAKTDENLEIFVPKSEYSWNKADDLNI---KVGDSLDVK 391 Query: 419 VLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYL 478 ++++ E + + +K+L + P++ + K ++T + G V L D +G + Sbjct: 392 LIEIKKEDKNLVGSIKRLGKSPYDIASSKFDKNTEYEVEITDILENGVLVRLTDDFKGLI 451 Query: 479 RASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLS 518 E S++ ++D +VGD+++A + KN +I LS Sbjct: 452 PKKELSKEEIKDIKEHFNVGDKIKAVVFDKNNKN-SILLS 490 Score = 121 bits (304), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 89/354 (25%), Positives = 181/354 (51%), Gaps = 26/354 (7%) Query: 173 VIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPS 232 +I S+N E+ + N+++G ++ GI+K G V+ G + L + P+ Sbjct: 74 LIVSKNILEKKEAFSNIKKGDKISGIIKEKIKGGYKVECGLIKAFLPFRSSGLNQQYIPN 133 Query: 233 EIVNVGDEITVKVLKFD---RERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTD 289 ++L+FD + R + + ++ ++ + G K+TG ++N D Sbjct: 134 G----------ELLEFDVTEKNRKEIVISRLEIIKENEKNFLNKLNLGDKITGTISNKLD 183 Query: 290 YGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC 349 YG +++ + GL+H SE+ W + K VG+ ++V ++++D+E ++I L +KQ Sbjct: 184 YGMIIDLG-TLSGLLHSSEISWNKE--KTLKDFTVGEKIDVKIIELDKETKKIKLSIKQL 240 Query: 350 KANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREY 409 NPW + E ++ G ++ +K + FG+ + L G + L+H+SD+ + G +EY Sbjct: 241 VENPWLKIREKYHIGQNIDAPVKEVFSFGVVVDL-GDREDLIHVSDLYYKKIG-NVEKEY 298 Query: 410 KKGDEIAAVVLQVDAERERISLGVKQLAE---DPFNNWVALNKKGAIVTGKVTAVDAKGA 466 KKGD I V+ ++ E+E+I L + + E + +++ LN I+ KVT V G Sbjct: 299 KKGDVIFCEVIDINDEKEKIILSARTVFEKIWESLDDFCLLN---DIINIKVTRVKDFGF 355 Query: 467 TVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 + + +E ++ SE S ++ +D L + VGD ++ K + ++++ + S++ Sbjct: 356 FAKTDENLEIFVPKSEYSWNKADD--LNIKVGDSLDVKLIEIKKEDKNLVGSIK 407 >UniRef50_Q7UWH7 30S ribosomal protein S1 n=1 Tax=Rhodopirellula baltica RepID=Q7UWH7_RHOBA Length = 560 Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 111/335 (33%), Positives = 185/335 (55%), Gaps = 12/335 (3%) Query: 21 GSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAV--EDG 78 G+ V V+ I +D V V G E +P EQF E E G ++V + + EDG Sbjct: 191 GARVHAQVIKIHQDNVFVSLGGPDEGTVPFEQFT----EEEPTPGQSIEVIVRGINSEDG 246 Query: 79 FGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDV 138 L KA W ++ + V I G GG ++ +R F+P S + Sbjct: 247 LFSCSLPG-KATEVSDWDDID----EGSVVEATITGHNNGGLECKVGSVRGFMPISQISE 301 Query: 139 RPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGI 198 V D +++ V + + +R N+V+SRRA++E E +R + LE ++ G ++G+ Sbjct: 302 YRVEDCSEFVDQKMVCLVTEANARRGNLVLSRRAILEREREVKRQEQLEKIEPGDILEGV 361 Query: 199 VKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLG 258 V+++ D+GAFVD+GG+DGL+H++ ++W+R+KHPSE++ G + V+V K D++ ++SL Sbjct: 362 VRSVRDFGAFVDVGGLDGLIHVSKLSWERIKHPSEVIEEGQNVKVRVDKIDKQTGKMSLT 421 Query: 259 LKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHP 318 + L E+PW + + G+ G VT ++G FV + GVEGL H+SE+ T++ Sbjct: 422 YRDLLENPWDSAESMFAVGSVHKGEVTRTAEFGAFVRLTAGVEGLCHISEL-ATHRVSRV 480 Query: 319 SKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP 353 S VVNVGD V+V ++ D + +++ L +K A P Sbjct: 481 SSVVNVGDEVDVKIMSFDRDSQKVGLSIKAAHAKP 515 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 56/167 (33%), Positives = 96/167 (57%), Gaps = 2/167 (1%) Query: 355 QQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDE 414 Q+ E GD +EG ++S+ DFG F+ + GG+DGL+H+S +SW + ++G Sbjct: 346 QEQLEKIEPGDILEGVVRSVRDFGAFVDV-GGLDGLIHVSKLSWERI-KHPSEVIEEGQN 403 Query: 415 IAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGV 474 + V ++D + ++SL + L E+P+++ ++ G++ G+VT GA V L GV Sbjct: 404 VKVRVDKIDKQTGKMSLTYRDLLENPWDSAESMFAVGSVHKGEVTRTAEFGAFVRLTAGV 463 Query: 475 EGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRA 521 EG SE + RV + V++VGDEV+ K DR ++ + LS++A Sbjct: 464 EGLCHISELATHRVSRVSSVVNVGDEVDVKIMSFDRDSQKVGLSIKA 510 >UniRef50_UPI00016B22D3 RNA binding S1 domain protein n=2 Tax=candidate division TM7 RepID=UPI00016B22D3 Length = 358 Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 111/341 (32%), Positives = 190/341 (55%), Gaps = 22/341 (6%) Query: 21 GSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGFG 80 G +V G V+++ K VL+D G + +P + ++ I GDEV ++ E G Sbjct: 25 GEVVTGKVLSLKKHEVLIDLGAQGVGFVPRREVGFSRN---ISEGDEVSASVVDTELENG 81 Query: 81 ETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRP 140 +LLS KA + W + E E + +GG VE G+R FLP S + Sbjct: 82 MSLLSLRKAVKDRGWEEVSARLESGEVIDIQPYDANRGGLLVEYEGVRGFLPVSQLSAEH 141 Query: 141 V-------RDTL-----HLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLEN 188 +D + +L GK ++ +++ D+K N ++ S + ++ + AER E Sbjct: 142 YPRVGSSDKDEILQRLNNLIGKTMKVRILDADRKSNKLIFSEKEAVK-DGLAER---FEK 197 Query: 189 LQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKF 248 L G +V+G+V + D+G FV++ G++GL+HI++++W+RV +PS+ V G I K++ Sbjct: 198 LAVGDQVEGVVTGVVDFGVFVNVEGIEGLVHISEISWERVNNPSDYVKTGQTIKAKIIAI 257 Query: 249 DRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSE 308 D++ R+SL +KQL +DPW+ + + +G K+ G VT +T +G FV++ +E LVH+SE Sbjct: 258 DKD--RLSLSMKQLTQDPWLTEVQNFSKGDKVEGTVTRITPFGAFVQVSPAIEALVHISE 315 Query: 309 MDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC 349 + +N N+ P KV + + E ++LDID+E R+ISL L + Sbjct: 316 LGDSN-NVDPEKVFTLNERKEFVILDIDKENRKISLSLGES 355 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 99/350 (28%), Positives = 173/350 (49%), Gaps = 26/350 (7%) Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLG--GVDGLLHITDMAWKRVKHPSEIVNVGDE 240 D + L G V G V +L + +DLG GV G + ++ + R ++ GDE Sbjct: 16 DTSAKQLVAGEVVTGKVLSLKKHEVLIDLGAQGV-GFVPRREVGFSRN------ISEGDE 68 Query: 241 ITVKVLKFDRERTRVSLGLKQLGEDP-WVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEG 299 ++ V+ + E L L++ +D W ++ R G + + + G VE E G Sbjct: 69 VSASVVDTELENGMSLLSLRKAVKDRGWEEVSARLESGEVIDIQPYDANRGGLLVEYE-G 127 Query: 300 VEGLVHVSEMDW--------TNKNIHPSKVVN-VGDVVEVMVLDIDEERRRISLGLKQCK 350 V G + VS++ ++K+ ++ N +G ++V +LD D + ++ K+ Sbjct: 128 VRGFLPVSQLSAEHYPRVGSSDKDEILQRLNNLIGKTMKVRILDADRKSNKLIFSEKEAV 187 Query: 351 ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREY- 409 + + E GD+VEG + + DFG+F+ ++G I+GLVH+S+ISW + +Y Sbjct: 188 KDGLAERFEKLAVGDQVEGVVTGVVDFGVFVNVEG-IEGLVHISEISWERVNNPS--DYV 244 Query: 410 KKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVE 469 K G I A ++ +D ++R+SL +KQL +DP+ V KG V G VT + GA V+ Sbjct: 245 KTGQTIKAKIIAID--KDRLSLSMKQLTQDPWLTEVQNFSKGDKVEGTVTRITPFGAFVQ 302 Query: 470 LADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSV 519 ++ +E + SE D V ++ + E +D++NR ISLS+ Sbjct: 303 VSPAIEALVHISELGDSNNVDPEKVFTLNERKEFVILDIDKENRKISLSL 352 >UniRef50_A3ZTD7 30S ribosomal protein S1 n=2 Tax=Bacteria RepID=A3ZTD7_9PLAN Length = 536 Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 97/246 (39%), Positives = 146/246 (59%), Gaps = 1/246 (0%) Query: 108 VTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVV 167 V V++G KGG + R F+P S + V + G++L+ V + + +R N+V Sbjct: 245 VDAVVDGVNKGGLECAVGQARGFIPASQIAPHHVTNMEDYLGQKLQCLVTEANPERRNLV 304 Query: 168 VSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKR 227 +S RAV E R + + LQ G G V L D+GAFVD+GGVDGL+H++ ++W R Sbjct: 305 LSARAVAEKAKEDSRKETMVTLQVGQMRDGTVTRLQDFGAFVDIGGVDGLVHVSQISWDR 364 Query: 228 VKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNL 287 VKHPS+ ++ G + VKV K D E ++ L ++ E+PW +A+ + G + G+VT + Sbjct: 365 VKHPSDALSEGQAVRVKVTKIDPETGKIGLSIRDTLENPWQKVAEEFSVGAIINGKVTKI 424 Query: 288 TDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLK 347 D+G FVEI G+EGLVHVSE+ T + S V+ G+ VEV V++ID+E+RRI L +K Sbjct: 425 MDFGAFVEIAPGIEGLVHVSEVSHTRVSRIES-VLKAGEKVEVKVVNIDKEKRRIGLSIK 483 Query: 348 QCKANP 353 P Sbjct: 484 ALSPAP 489 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 70/219 (31%), Positives = 112/219 (51%), Gaps = 10/219 (4%) Query: 315 NIHPSKVVNV----GDVVEVMVLDIDEERRRISLGLK----QCKANPWQQFAETHNKGDR 366 I P V N+ G ++ +V + + ERR + L + + K + ++ T G Sbjct: 272 QIAPHHVTNMEDYLGQKLQCLVTEANPERRNLVLSARAVAEKAKEDSRKETMVTLQVGQM 331 Query: 367 VEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAER 426 +G + + DFG F+ + GG+DGLVH+S ISW+ + +G + V ++D E Sbjct: 332 RDGTVTRLQDFGAFVDI-GGVDGLVHVSQISWDRV-KHPSDALSEGQAVRVKVTKIDPET 389 Query: 427 ERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRD 486 +I L ++ E+P+ GAI+ GKVT + GA VE+A G+EG + SE S Sbjct: 390 GKIGLSIRDTLENPWQKVAEEFSVGAIINGKVTKIMDFGAFVEIAPGIEGLVHVSEVSHT 449 Query: 487 RVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEA 525 RV VL G++VE K +D++ R I LS++A A Sbjct: 450 RVSRIESVLKAGEKVEVKVVNIDKEKRRIGLSIKALSPA 488 >UniRef50_UPI00016C5864 30S ribosomal protein S1 n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C5864 Length = 546 Score = 182 bits (461), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 109/318 (34%), Positives = 180/318 (56%), Gaps = 10/318 (3%) Query: 34 DVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKR-- 91 DV + G +S+ +P +QF+ + VG+ VD +D + G +L+RE A + Sbjct: 188 DVFVEVPGGRSQGLLPLQQFEGRR----PAVGESVDFDIDHYDSANGLLILTREGAAQVV 243 Query: 92 HEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKE 151 H+ W + VTG K K G T+E+ GI+ FLP S +D+ V + G+ Sbjct: 244 HD-WTQVTYGMVVEAKVTGT--NKNKTGLTIEVAGIKGFLPASQLDLYRVENVDQFVGQR 300 Query: 152 LEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL 211 L+ V +++ + N++VSRRAV+E E + ++ +++ KGIV+++ +GAFVDL Sbjct: 301 LKVMVSEVNPEERNLIVSRRAVLEREKQVKAEEFWRTVEKDQVRKGIVRSVKPFGAFVDL 360 Query: 212 GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIA 271 GG DGL+ +++ +W+RV +E+V +G E+ VK+ K D E ++ L ++ L P+ Sbjct: 361 GGADGLIPVSEFSWQRVNDLNEVVKIGQEVEVKISKIDFEARKIGLSMRALTTSPFEEFT 420 Query: 272 KRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVM 331 K G ++TG+V+ L D+G FVE+ G+EGL+HVSE+ T + S V+ G V V Sbjct: 421 KTTQAGARVTGKVSRLADFGAFVELAPGLEGLIHVSELS-TQRVRRVSDVIEPGQNVIVE 479 Query: 332 VLDIDEERRRISLGLKQC 349 +L D +RI+L LK+ Sbjct: 480 ILSTDPVTKRIALSLKKI 497 Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 80/252 (31%), Positives = 129/252 (51%), Gaps = 24/252 (9%) Query: 279 KLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMD-WTNKNIHPSKVVNVGDVVEVMVLDIDE 337 K+TG TN G +E+ G++G + S++D + +N+ VG ++VMV +++ Sbjct: 258 KVTG--TNKNKTGLTIEVA-GIKGFLPASQLDLYRVENVD----QFVGQRLKVMVSEVNP 310 Query: 338 ERRRISLGL-------KQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGL 390 E R + + KQ KA ++F T K +G ++S+ FG F+ L GG DGL Sbjct: 311 EERNLIVSRRAVLEREKQVKA---EEFWRTVEKDQVRKGIVRSVKPFGAFVDL-GGADGL 366 Query: 391 VHLSDISWNVAGE--EAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALN 448 + +S+ SW + E V K G E+ + ++D E +I L ++ L PF + Sbjct: 367 IPVSEFSWQRVNDLNEVV---KIGQEVEVKISKIDFEARKIGLSMRALTTSPFEEFTKTT 423 Query: 449 KKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGV 508 + GA VTGKV+ + GA VELA G+EG + SE S RV + V+ G V + Sbjct: 424 QAGARVTGKVSRLADFGAFVELAPGLEGLIHVSELSTQRVRRVSDVIEPGQNVIVEILST 483 Query: 509 DRKNRAISLSVR 520 D + I+LS++ Sbjct: 484 DPVTKRIALSLK 495 Score = 95.1 bits (235), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 72/255 (28%), Positives = 128/255 (50%), Gaps = 27/255 (10%) Query: 194 EVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERT 253 +V G KN T G +++ G+ G L + + RV++ + V G + V V + + E Sbjct: 258 KVTGTNKNKT--GLTIEVAGIKGFLPASQLDLYRVENVDQFV--GQRLKVMVSEVNPEER 313 Query: 254 RVSLGLKQL--------GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVH 305 + + + + E+ W + K G V ++ +G FV++ G +GL+ Sbjct: 314 NLIVSRRAVLEREKQVKAEEFWRTVEK----DQVRKGIVRSVKPFGAFVDLG-GADGLIP 368 Query: 306 VSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGD 365 VSE W N ++VV +G VEV + ID E R+I L ++ +P+++F +T G Sbjct: 369 VSEFSWQRVNDL-NEVVKIGQEVEVKISKIDFEARKIGLSMRALTTSPFEEFTKTTQAGA 427 Query: 366 RVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVRE----YKKGDEIAAVVLQ 421 RV GK+ + DFG F+ L G++GL+H+S++S + VR + G + +L Sbjct: 428 RVTGKVSRLADFGAFVELAPGLEGLIHVSELS-----TQRVRRVSDVIEPGQNVIVEILS 482 Query: 422 VDAERERISLGVKQL 436 D +RI+L +K++ Sbjct: 483 TDPVTKRIALSLKKI 497 >UniRef50_B0K198 RNA binding S1 domain protein n=7 Tax=Thermoanaerobacter RepID=B0K198_THEPX Length = 365 Score = 181 bits (459), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 103/329 (31%), Positives = 194/329 (58%), Gaps = 10/329 (3%) Query: 19 RPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQF---KNAQGELEIQVGDEVDVALDAV 75 RPG IV+G V+ + + ++ + KS++ +P + N + V DE+++ + +V Sbjct: 14 RPGDIVKGKVIKVSDEGIIANIDYKSDAFVPKNELSLNPNFDVKKTFNVEDELNLYIISV 73 Query: 76 EDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSL 135 E+ G L S+ A + +EKAY++ E + G + VKGG G + F+P S Sbjct: 74 ENDEGNVLASKVMADDKLSREKIEKAYKNEEIIEGEVIEVVKGGVIAYSLGAKVFIPASQ 133 Query: 136 VDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEV 195 +++ V GK L ++I+ + +V S++ V++ E + LL NL+EG V Sbjct: 134 LELHYVDKLNEYLGKTLRLRIIEYIPGKK-IVGSQKEVLKLEREKAKKALLSNLKEGDIV 192 Query: 196 KGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRV 255 +G VKN+ D GAFVD+GG DG + +++++W+R+K+P E++ +GD++++ +LK D + ++ Sbjct: 193 EGRVKNIIDKGAFVDIGGFDGFIPLSEISWERIKNPREVLGMGDKVSIYILKVDEKNEKI 252 Query: 256 SLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKN 315 +L L+++ DPW + +Y EG L G +T +T +G FV++E G+EGLVH + ++ Sbjct: 253 TLSLRKVLPDPWKNVETKYHEGEVLKGTITKITPFGVFVQLEPGIEGLVHKNNLE----- 307 Query: 316 IHPSKVVNVGDVVEVMVLDIDEERRRISL 344 + K + D++ V +L+I+++ ++I+L Sbjct: 308 -NSIKTYKINDIIGVEILNINQQDKKINL 335 Score = 104 bits (259), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 60/195 (30%), Positives = 109/195 (55%), Gaps = 21/195 (10%) Query: 245 VLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLV 304 VLK +RE+ + A+ EG + GRV N+ D G FV+I G +G + Sbjct: 170 VLKLEREKAKK-------------ALLSNLKEGDIVEGRVKNIIDKGAFVDIG-GFDGFI 215 Query: 305 HVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKG 364 +SE+ W +P +V+ +GD V + +L +DE+ +I+L L++ +PW+ +++G Sbjct: 216 PLSEISWERIK-NPREVLGMGDKVSIYILKVDEKNEKITLSLRKVLPDPWKNVETKYHEG 274 Query: 365 DRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDA 424 + ++G I IT FG+F+ L+ GI+GLVH +++ E +++ YK D I +L ++ Sbjct: 275 EVLKGTITKITPFGVFVQLEPGIEGLVHKNNL------ENSIKTYKINDIIGVEILNINQ 328 Query: 425 ERERISLGVKQLAED 439 + ++I+L L E+ Sbjct: 329 QDKKINLKEVPLEEE 343 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 46/167 (27%), Positives = 94/167 (56%), Gaps = 15/167 (8%) Query: 364 GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKK----GDEIAAVV 419 GD VEG++K+I D G F+ + GG DG + LS+ISW E ++ ++ GD+++ + Sbjct: 189 GDIVEGRVKNIIDKGAFVDI-GGFDGFIPLSEISW-----ERIKNPREVLGMGDKVSIYI 242 Query: 420 LQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLR 479 L+VD + E+I+L ++++ DP+ N +G ++ G +T + G V+L G+EG + Sbjct: 243 LKVDEKNEKITLSLRKVLPDPWKNVETKYHEGEVLKGTITKITPFGVFVQLEPGIEGLVH 302 Query: 480 ASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEAD 526 ++ +E++ + D + + ++++++ I+L +E D Sbjct: 303 -----KNNLENSIKTYKINDIIGVEILNINQQDKKINLKEVPLEEED 344 >UniRef50_Q4EP69 Ribosomal protein S1, putative (Fragment) n=1 Tax=Listeria monocytogenes str. 1/2a F6854 RepID=Q4EP69_LISMO Length = 355 Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 106/293 (36%), Positives = 169/293 (57%), Gaps = 10/293 (3%) Query: 11 ESLKEIETR---PGSIVRGVVVAI-DKDVVLVDAGLKSESAIPAEQFKNAQGELE---IQ 63 E L ++E R G V G V ++ DK V + G K + +P + N E + Sbjct: 65 EDLFDVEVRNFEEGDKVTGTVTSVEDKQVYVGIPGSKLDGVVPISELSNIHVETASDVVS 124 Query: 64 VGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVE 123 VGD +D+ + VED +LS+ K +A ++ +E E V++ VKGG V+ Sbjct: 125 VGDTLDLIVTKVEDDI--LVLSKRKVDAEKASDDIKAKFESGEVFEAVVSDVVKGGLVVD 182 Query: 124 LNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERD 183 L G+RAF+P SLV+ V D +G L FKV++ + + N V++S RAV+E+E ++++ Sbjct: 183 L-GVRAFVPASLVEDHFVEDFADYKGTTLTFKVVEFEPENNRVILSHRAVVETEKASQKQ 241 Query: 184 QLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITV 243 LL ++EG ++G V+ L ++GAFVD+GGVDGL+HI+ +++K + P E++ G ++TV Sbjct: 242 ALLSEIKEGDVIEGTVQRLANFGAFVDIGGVDGLVHISQISYKHIATPQEVLEEGQKVTV 301 Query: 244 KVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI 296 KV+ D E R+SL +K PW I ++ G+ L G+V L +G FVEI Sbjct: 302 KVIGIDPENERISLSIKATLPGPWDGITEKAQVGSVLEGKVVRLVTFGAFVEI 354 Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 81/293 (27%), Positives = 149/293 (50%), Gaps = 18/293 (6%) Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLGG--VDGLLHITDMAWKRVKHPSEIVNVGDEITV 243 + N +EG +V G V ++ D +V + G +DG++ I++++ V+ S++V+VGD + + Sbjct: 72 VRNFEEGDKVTGTVTSVEDKQVYVGIPGSKLDGVVPISELSNIHVETASDVVSVGDTLDL 131 Query: 244 KVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGL 303 V K + + +S K E I ++ G V+++ G V++ GV Sbjct: 132 IVTKVEDDILVLS-KRKVDAEKASDDIKAKFESGEVFEAVVSDVVKGGLVVDL--GVRAF 188 Query: 304 VHVSEM-DWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC----KANPWQQFA 358 V S + D ++ K G + V++ + E R+ L + KA+ Q Sbjct: 189 VPASLVEDHFVEDFADYK----GTTLTFKVVEFEPENNRVILSHRAVVETEKASQKQALL 244 Query: 359 ETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISW-NVAGEEAVREYKKGDEIAA 417 +GD +EG ++ + +FG F+ + GG+DGLVH+S IS+ ++A + V E +G ++ Sbjct: 245 SEIKEGDVIEGTVQRLANFGAFVDI-GGVDGLVHISQISYKHIATPQEVLE--EGQKVTV 301 Query: 418 VVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVEL 470 V+ +D E ERISL +K P++ + G+++ GKV + GA VE+ Sbjct: 302 KVIGIDPENERISLSIKATLPGPWDGITEKAQVGSVLEGKVVRLVTFGAFVEI 354 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 87/308 (28%), Positives = 144/308 (46%), Gaps = 54/308 (17%) Query: 100 KAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVD-VRPVRD--TLHLE-------- 148 + +E+ + VTG + +VE + +PGS +D V P+ + +H+E Sbjct: 73 RNFEEGDKVTGTVT-------SVEDKQVYVGIPGSKLDGVVPISELSNIHVETASDVVSV 125 Query: 149 GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAF 208 G L+ V K++ + +V+S+R V ++E ++ D + + G + +V ++ G Sbjct: 126 GDTLDLIVTKVED--DILVLSKRKV-DAEKAS--DDIKAKFESGEVFEAVVSDVVKGGLV 180 Query: 209 VDLGGVDGLLHITDMAWKRVKHPSEIVN----------VGDEITVKVLKFDRERTRVSLG 258 VDLG R P+ +V G +T KV++F+ E RV L Sbjct: 181 VDLG-------------VRAFVPASLVEDHFVEDFADYKGTTLTFKVVEFEPENNRVILS 227 Query: 259 LKQLGEDPWV----AIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNK 314 + + E A+ EG + G V L ++G FV+I GV+GLVH+S++ + K Sbjct: 228 HRAVVETEKASQKQALLSEIKEGDVIEGTVQRLANFGAFVDIG-GVDGLVHISQISY--K 284 Query: 315 NI-HPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKS 373 +I P +V+ G V V V+ ID E RISL +K PW E G +EGK+ Sbjct: 285 HIATPQEVLEEGQKVTVKVIGIDPENERISLSIKATLPGPWDGITEKAQVGSVLEGKVVR 344 Query: 374 ITDFGIFI 381 + FG F+ Sbjct: 345 LVTFGAFV 352 Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 85/339 (25%), Positives = 158/339 (46%), Gaps = 32/339 (9%) Query: 195 VKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVL-KFDRERT 253 +K I+K + + G D L++ + R + DE +VKV + + + Sbjct: 1 MKSILKGFSSWKISFTEGVFDIFLYLIGICLSRKTSQA------DEASVKVASELEIPKI 54 Query: 254 RVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE-EGVEGLVHVSEMDWT 312 R++ G + ED + + + EG K+TG VT++ D +V I ++G+V +SE+ Sbjct: 55 RLTNGGLHMSEDLFDVEVRNFEEGDKVTGTVTSVEDKQVYVGIPGSKLDGVVPISEL--- 111 Query: 313 NKNIH---PSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNK---GDR 366 NIH S VV+VGD ++++V ++++ L L + K + + + K G+ Sbjct: 112 -SNIHVETASDVVSVGDTLDLIVTKVEDD----ILVLSKRKVDAEKASDDIKAKFESGEV 166 Query: 367 VEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAER 426 E + + G+ + L G+ V S + + E +YK G + V++ + E Sbjct: 167 FEAVVSDVVKGGLVVDL--GVRAFVPASLVEDHFV--EDFADYK-GTTLTFKVVEFEPEN 221 Query: 427 ERISLGVKQLAE----DPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASE 482 R+ L + + E ++ K+G ++ G V + GA V++ GV+G + S+ Sbjct: 222 NRVILSHRAVVETEKASQKQALLSEIKEGDVIEGTVQRLANFGAFVDIG-GVDGLVHISQ 280 Query: 483 ASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRA 521 S + VL G +V K G+D +N ISLS++A Sbjct: 281 ISYKHIATPQEVLEEGQKVTVKVIGIDPENERISLSIKA 319 >UniRef50_C6P7Z4 RNA binding S1 domain protein n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6P7Z4_CLOTS Length = 362 Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 107/327 (32%), Positives = 202/327 (61%), Gaps = 12/327 (3%) Query: 21 GSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK---NAQGELEIQVGDEVDVALDAVED 77 G IV+G ++ I D ++ D K+++ +P +Q N VGDE+D+ + ED Sbjct: 16 GDIVKGKIIKILSDGIIADISYKADAYVPKDQLSLDPNLDINKFFNVGDEIDLYIVKRED 75 Query: 78 GFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVD 137 G+ L S+ KA A L+ AY++ ++G I +KGG ++ G++AF+P S +D Sbjct: 76 ENGDVLASKIKADTELAKEKLDTAYKNGNILSGKIIEIIKGGVLADILGVKAFIPASQLD 135 Query: 138 VRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKG 197 + V + G+ ++ K+I + ++ S++ V+E E ++++LL+ LQEG ++G Sbjct: 136 IHYVNNLNDYLGENVKVKIIDYIPNKK-LIASQKVVLEEEKLKKKEELLKTLQEGQVIQG 194 Query: 198 IVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSL 257 +VK++T +GAF+D+GG+DGL+ +++++W R K+ ++I+++G+++ V + D+E +V+L Sbjct: 195 VVKSITKFGAFIDIGGIDGLIPLSEISWVRNKNINDILHIGEKVDAYVERIDKE--KVTL 252 Query: 258 GLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIH 317 L++L DPW I+ ++ G + G++ N+T +G FV+I +GVEGLVH S++ KNI Sbjct: 253 SLRKLIPDPWTTISAKFKVGDVILGKIVNITTFGIFVDISDGVEGLVHKSDL---LKNIK 309 Query: 318 PSKVVNVGDVVEVMVLDIDEERRRISL 344 + +G+ + V +L+ID +++SL Sbjct: 310 EYR---IGENISVEILNIDTNNKKMSL 333 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 78/309 (25%), Positives = 164/309 (53%), Gaps = 22/309 (7%) Query: 129 AFLPGSLVDVRPVRDT--LHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLL 186 A++P + + P D G E++ ++K + + +V+ S+ I+++ +++L Sbjct: 41 AYVPKDQLSLDPNLDINKFFNVGDEIDLYIVKREDENGDVLASK---IKADTELAKEKLD 97 Query: 187 ENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVL 246 + G + G + + G D+ GV + + + V + ++ + G+ + VK++ Sbjct: 98 TAYKNGNILSGKIIEIIKGGVLADILGVKAFIPASQLDIHYVNNLNDYL--GENVKVKII 155 Query: 247 KFDRERTRVS---LGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGL 303 + + ++ + L++ + K EG + G V ++T +G F++I G++GL Sbjct: 156 DYIPNKKLIASQKVVLEEEKLKKKEELLKTLQEGQVIQGVVKSITKFGAFIDIG-GIDGL 214 Query: 304 VHVSEMDWT-NKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHN 362 + +SE+ W NKNI+ ++++G+ V+ V ID+E+ ++L L++ +PW + Sbjct: 215 IPLSEISWVRNKNIN--DILHIGEKVDAYVERIDKEK--VTLSLRKLIPDPWTTISAKFK 270 Query: 363 KGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQV 422 GD + GKI +IT FGIF+ + G++GLVH SD+ N ++EY+ G+ I+ +L + Sbjct: 271 VGDVILGKIVNITTFGIFVDISDGVEGLVHKSDLLKN------IKEYRIGENISVEILNI 324 Query: 423 DAERERISL 431 D +++SL Sbjct: 325 DTNNKKMSL 333 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 83/294 (28%), Positives = 155/294 (52%), Gaps = 25/294 (8%) Query: 232 SEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAK---RYPEGTKLTGRVTNLT 288 ++ NVGDEI + ++K RE + ++ D +A K Y G L+G++ + Sbjct: 57 NKFFNVGDEIDLYIVK--REDENGDVLASKIKADTELAKEKLDTAYKNGNILSGKIIEII 114 Query: 289 DYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVN--VGDVVEVMVLDIDEERRRIS--- 343 G +I GV+ + S++D IH +N +G+ V+V ++D ++ I+ Sbjct: 115 KGGVLADIL-GVKAFIPASQLD-----IHYVNNLNDYLGENVKVKIIDYIPNKKLIASQK 168 Query: 344 LGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGE 403 + L++ K ++ +T +G ++G +KSIT FG FI + GGIDGL+ LS+ISW V + Sbjct: 169 VVLEEEKLKKKEELLKTLQEGQVIQGVVKSITKFGAFIDI-GGIDGLIPLSEISW-VRNK 226 Query: 404 EAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDA 463 G+++ A V ++D +E+++L +++L DP+ A K G ++ GK+ + Sbjct: 227 NINDILHIGEKVDAYVERID--KEKVTLSLRKLIPDPWTTISAKFKVGDVILGKIVNITT 284 Query: 464 KGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISL 517 G V+++DGVEG + S+ ++ E +G+ + + +D N+ +SL Sbjct: 285 FGIFVDISDGVEGLVHKSDLLKNIKE-----YRIGENISVEILNIDTNNKKMSL 333 >UniRef50_A6LQP2 RNA binding S1 domain protein n=7 Tax=Clostridium RepID=A6LQP2_CLOB8 Length = 384 Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 110/332 (33%), Positives = 190/332 (57%), Gaps = 6/332 (1%) Query: 21 GSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK-NAQGELEI-QVGDEVDVALDAVEDG 78 G +++G V+ ++ V V+ + I E+ + + +E+ DE+ V + + DG Sbjct: 25 GDVLKGKVIDVNDKEVSVNIDYAFDGLIAKEEVSIDDRDPMEVVSKDDEIYVYVISPNDG 84 Query: 79 FGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDV 138 G LS KA + L + +++ + + + + KGG +R F+PGSL Sbjct: 85 EGYVELSLIKALEIKDREELSECFKEKKNIKVHVKEETKGGVIAYYGNVRVFIPGSLAS- 143 Query: 139 RPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGI 198 R + L G++L+ ++ +LD K V+ SRR + E E + + + +NL+EG + G+ Sbjct: 144 RERIELSSLVGRDLDVRITELDFKNKKVIASRRIIEEEEYNKNKKNIWDNLKEGEKRNGV 203 Query: 199 VKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLG 258 VK + +GAFVD+GGV+GL+H++D++W+RV P +IV GD + V + DR+ R+SL Sbjct: 204 VKKIVKFGAFVDIGGVEGLIHLSDLSWERVNKPEDIVKEGDNVEVFIGNVDRKNERLSLI 263 Query: 259 LKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNI-H 317 LK + ++PW K EG G+V LT +G FVE+ +G+EGLVH++E+ T+++I Sbjct: 264 LKDVTKEPWTVHGKDINEGDIFEGKVIRLTTFGAFVELFDGIEGLVHITEI--TDEHIAK 321 Query: 318 PSKVVNVGDVVEVMVLDIDEERRRISLGLKQC 349 PS V+ V+V VL ++ E +RI+L +K+ Sbjct: 322 PSDVLEANQKVKVKVLSVNREEKRIALSIKEA 353 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 84/272 (30%), Positives = 143/272 (52%), Gaps = 12/272 (4%) Query: 172 AVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHP 231 ++I++ +R++L E +E +K VK T G G V + + + +R++ Sbjct: 91 SLIKALEIKDREELSECFKEKKNIKVHVKEETKGGVIAYYGNVRVFIPGSLASRERIELS 150 Query: 232 SEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVA----IAKRYPEGTKLTGRVTNL 287 S VG ++ V++ + D + +V + + E+ + I EG K G V + Sbjct: 151 SL---VGRDLDVRITELDFKNKKVIASRRIIEEEEYNKNKKNIWDNLKEGEKRNGVVKKI 207 Query: 288 TDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLK 347 +G FV+I GVEGL+H+S++ W N P +V GD VEV + ++D + R+SL LK Sbjct: 208 VKFGAFVDIG-GVEGLIHLSDLSWERVN-KPEDIVKEGDNVEVFIGNVDRKNERLSLILK 265 Query: 348 QCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDIS-WNVAGEEAV 406 PW + N+GD EGK+ +T FG F+ L GI+GLVH+++I+ ++A V Sbjct: 266 DVTKEPWTVHGKDINEGDIFEGKVIRLTTFGAFVELFDGIEGLVHITEITDEHIAKPSDV 325 Query: 407 REYKKGDEIAAVVLQVDAERERISLGVKQLAE 438 E + ++ VL V+ E +RI+L +K+ E Sbjct: 326 LEANQ--KVKVKVLSVNREEKRIALSIKEAVE 355 Score = 97.8 bits (242), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 74/254 (29%), Positives = 129/254 (50%), Gaps = 35/254 (13%) Query: 304 VHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNK 363 V ++E+D+ NK + S+ + I+EE + K N W E Sbjct: 159 VRITELDFKNKKVIASRRI------------IEEEE------YNKNKKNIWDNLKE---- 196 Query: 364 GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAG--EEAVREYKKGDEIAAVVLQ 421 G++ G +K I FG F+ + GG++GL+HLSD+SW E+ V+E GD + + Sbjct: 197 GEKRNGVVKKIVKFGAFVDI-GGVEGLIHLSDLSWERVNKPEDIVKE---GDNVEVFIGN 252 Query: 422 VDAERERISLGVKQLAEDPFNNWVALNK---KGAIVTGKVTAVDAKGATVELADGVEGYL 478 VD + ER+SL +K + ++P W K +G I GKV + GA VEL DG+EG + Sbjct: 253 VDRKNERLSLILKDVTKEP---WTVHGKDINEGDIFEGKVIRLTTFGAFVELFDGIEGLV 309 Query: 479 RASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQE 538 +E + + + + VL +V+ K V+R+ + I+LS++ E + K+ + ++ + Sbjct: 310 HITEITDEHIAKPSDVLEANQKVKVKVLSVNREEKRIALSIKEAVETN-KEYLDYIDNSD 368 Query: 539 DANFSNNAMAEAFK 552 ++ S + + FK Sbjct: 369 ESGTSLGDLLKGFK 382 Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 61/261 (23%), Positives = 118/261 (45%), Gaps = 25/261 (9%) Query: 271 AKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEV 330 KR G L G+V ++ D V I+ +GL+ E+ +++ P +VV+ D + V Sbjct: 19 VKRLNRGDVLKGKVIDVNDKEVSVNIDYAFDGLIAKEEVSIDDRD--PMEVVSKDDEIYV 76 Query: 331 MVLDIDEERRRISLGL-KQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDG 389 V+ ++ + L L K + ++ +E + ++ +K T G+ Sbjct: 77 YVISPNDGEGYVELSLIKALEIKDREELSECFKEKKNIKVHVKEETKGGV---------- 126 Query: 390 LVHLSDISWNVAGEEAVREYKK-----GDEIAAVVLQVDAERERISLGVKQLAEDPFNN- 443 + + ++ + G A RE + G ++ + ++D + +++ + + E+ +N Sbjct: 127 IAYYGNVRVFIPGSLASRERIELSSLVGRDLDVRITELDFKNKKVIASRRIIEEEEYNKN 186 Query: 444 ----WVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGD 499 W L K+G G V + GA V++ GVEG + S+ S +RV ++ GD Sbjct: 187 KKNIWDNL-KEGEKRNGVVKKIVKFGAFVDIG-GVEGLIHLSDLSWERVNKPEDIVKEGD 244 Query: 500 EVEAKFTGVDRKNRAISLSVR 520 VE VDRKN +SL ++ Sbjct: 245 NVEVFIGNVDRKNERLSLILK 265 >UniRef50_Q6MNP5 30S ribosomal protein S1 n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MNP5_BDEBA Length = 398 Score = 175 bits (444), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 117/369 (31%), Positives = 202/369 (54%), Gaps = 16/369 (4%) Query: 4 SFAQLFEESLKEIETR--PGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE 61 SF +LF +S K ++T+ G V G +++I K+ V G ++ I + + E++ Sbjct: 19 SFEELFAQSEKGMKTKLSVGDQVHGEILSIGKEEAFVATGTPTDGMILTKDLLDENKEVK 78 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 +VGD +D + +++ G E L++ K + + +LE A++ V G + GGF Sbjct: 79 YKVGDYIDCVVTSIKGG--EVRLAK-KGSMNASTDSLEDAFDMELPVEGRVTETCNGGFR 135 Query: 122 VELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 V + G AF P S +D R V+D GK+ +F + +LD K N+VVSRR V++ + + Sbjct: 136 VSIQGKTAFCPISQIDSRFVQDANEYVGKKFDFMITQLDPKGRNIVVSRRKVLDLQKAEN 195 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 + Q G ++G + L +GAFV+L G++GL+H+++++W RV P E+V G Sbjct: 196 EGTFMLKHQPGALLEGKIVRLEKFGAFVELEAGIEGLIHVSELSWSRVHDPKEVVMAGQP 255 Query: 241 ITVKVLKFDR--ERTRVSLGLKQL--GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI 296 +TVK++K + R ++SL LKQ +PW+ + +++P GT + G+V YG FV I Sbjct: 256 VTVKLIKMEEVDGRLKISLSLKQADGAGNPWMTVPQKFPVGTVVQGKVEKKETYGLFVNI 315 Query: 297 EEGVEGLVHVSEMDWTNKNIHPSKVVNV--GDVVEVMVLDIDEERRRISLGLK-QCKANP 353 GV GL+ S+ W + ++ ++ N GD V V V I E ++ISL L + + + Sbjct: 316 APGVTGLLPRSK--WRD-SVDAAQYENKKRGDDVTVQVDQIMFEEKKISLALPGEAEDHS 372 Query: 354 WQQFAETHN 362 W+ + T + Sbjct: 373 WKSHSTTSS 381 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 84/294 (28%), Positives = 134/294 (45%), Gaps = 47/294 (15%) Query: 282 GRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVN-----VGDVVEVMVLDID 336 GRVT + G V I+ G +S++D S+ V VG + M+ +D Sbjct: 124 GRVTETCNGGFRVSIQ-GKTAFCPISQID--------SRFVQDANEYVGKKFDFMITQLD 174 Query: 337 EERRRISLGLKQC----KANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVH 392 + R I + ++ KA F H G +EGKI + FG F+ L+ GI+GL+H Sbjct: 175 PKGRNIVVSRRKVLDLQKAENEGTFMLKHQPGALLEGKIVRLEKFGAFVELEAGIEGLIH 234 Query: 393 LSDISWN---------VAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNN 443 +S++SW+ +AG+ + K +E+ R +ISL +KQ A+ N Sbjct: 235 VSELSWSRVHDPKEVVMAGQPVTVKLIKMEEVDG--------RLKISLSLKQ-ADGAGNP 285 Query: 444 WVALNKK---GAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATL-VLSVGD 499 W+ + +K G +V GKV + G V +A GV G L S+ RD V+ A GD Sbjct: 286 WMTVPQKFPVGTVVQGKVEKKETYGLFVNIAPGVTGLLPRSKW-RDSVDAAQYENKKRGD 344 Query: 500 EVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKA 553 +V + + + + ISL++ + E + +T + AMAEA K Sbjct: 345 DVTVQVDQIMFEEKKISLALPGEAEDHSWKSHSTTSS------GLGAMAEALKG 392 >UniRef50_A6GGH5 Ribosomal protein S1 n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GGH5_9DELT Length = 391 Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 133/390 (34%), Positives = 196/390 (50%), Gaps = 28/390 (7%) Query: 5 FAQLFEESLKEIETR-------PGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ 57 FA LFE+S+ R PG V+ VV I + V VD G +SE I + +N + Sbjct: 7 FAALFEQSVSGGGDRSSGKRLSPGESVQATVVQIGRQTVFVDVGTRSEGEIDVHELQNEK 66 Query: 58 GELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVK 117 GEL ++VGD L A+ G+ + LE A E VTG + VK Sbjct: 67 GELTVKVGDR----LRAIVQTGGDRPKLVMRFGGSGGIGDLELALESGAPVTGTVTKAVK 122 Query: 118 GGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESE 177 GG V++ RAF P S V V D EG+ L FKV+++ K +VVVSR+A+++ E Sbjct: 123 GGLEVQIGKTRAFCPASHVHVAYTPDISIYEGQSLAFKVLEIRDKGRSVVVSRKALLQEE 182 Query: 178 NSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNV 237 + LLE L EG V G V+ + YGAFVDLGGV+GL+HI+++ RV+ ++V+V Sbjct: 183 REQKGKALLEQLAEGQIVTGTVQTIQPYGAFVDLGGVEGLIHISELGHGRVERVEDVVSV 242 Query: 238 GDEITVKVLKFD----RERTRVSLGLKQL--GEDPWVAIAKRYPEGTKLTGRVTNLTDYG 291 G++I VKVL + + TR+SL L+Q G P A ++R + V + +G Sbjct: 243 GEQIRVKVLTIEPGDGKVATRISLSLRQAEQGAGPAQAGSER----KVVDAEVVKVETFG 298 Query: 292 CFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEE-RRRISLGL---K 347 FVE G+V E+D P + VG V V+ + D++ R R S+ Sbjct: 299 VFVETATS-GGIVPTRELDLPPGG-DPRRAYPVGKQVRVVAIGTDDKGRTRFSMRRVEET 356 Query: 348 QCKANPWQQFAETHNKGDRVEGKIKSITDF 377 + +AN ++QF +KG G + S + Sbjct: 357 EARAN-FKQFRAKQSKGQNKRGDMGSFGEL 385 >UniRef50_A9ESM2 RpsA3 protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9ESM2_SORC5 Length = 683 Score = 171 bits (433), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 124/371 (33%), Positives = 202/371 (54%), Gaps = 19/371 (5%) Query: 80 GETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVR 139 G LLSR + +A E A + E++ G + G VKGG V+L G+RAF P S VD+R Sbjct: 292 GMLLLSRAPVQLDQARARAEAALQSGESIEGFVTGAVKGGLEVDLGGLRAFAPASHVDLR 351 Query: 140 PVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIV 199 D +L G+ L+F V + +K ++VVSRR ++E E+ R + L +++ G KGIV Sbjct: 352 HGADLNYLVGQRLDFGVTQFAKKGRDIVVSRRKMLEEESRKARTEALTSIEPGSLHKGIV 411 Query: 200 KNLTDYGAFV---DLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVS 256 + + +G FV D GGV+GL+H+++ + R +++ G EI VKVL+ D ++ ++ Sbjct: 412 RKVVAWGVFVALPDAGGVEGLVHMSEASHDRGAKLADLFKPGAEIDVKVLRVD-DKGKLW 470 Query: 257 LGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNI 316 L K DPW A+ ++Y GT+ G+V L +G F+E+E G++GL+H + D + K I Sbjct: 471 LSRKAATVDPWDAVKEKYAVGTRHKGKVARLQPFGAFIELEPGIDGLIHTA--DLSMKPI 528 Query: 317 -HPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNK---GDRVEGKIK 372 HP++VV VGD V+V+V D RRI L A P + +E + G V+ + Sbjct: 529 QHPNEVVKVGDDVDVVVATCDAAGRRIGL----HPAPPEGEESEPRQRVQQGKAVKVAVT 584 Query: 373 SITDFGIFIGLDG----GIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERER 428 +T+ G+ + + G G + G + +E+ G ++ A +++VD R Sbjct: 585 QVTEGGLVVRVLGTTGRAARGFIPAGHTGTQ-RGTDLRKEFPIGTQLDAKIIEVDPRRGE 643 Query: 429 ISLGVKQLAED 439 L ++ L ED Sbjct: 644 AKLSIRALKED 654 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 100/380 (26%), Positives = 170/380 (44%), Gaps = 22/380 (5%) Query: 163 RNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITD 222 R +++ RA ++ + + R + LQ G ++G V G VDLGG+ + Sbjct: 290 RGGMLLLSRAPVQLDQARARAEAA--LQSGESIEGFVTGAVKGGLEVDLGGLRAFAPASH 347 Query: 223 MAWKRVKHPSEI-VNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWV-----AIAKRYPE 276 + ++H +++ VG + V +F ++ + + +++ E+ A+ P Sbjct: 348 V---DLRHGADLNYLVGQRLDFGVTQFAKKGRDIVVSRRKMLEEESRKARTEALTSIEP- 403 Query: 277 GTKLTGRVTNLTDYGCFVEIEE--GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLD 334 G+ G V + +G FV + + GVEGLVH+SE ++ + + G ++V VL Sbjct: 404 GSLHKGIVRKVVAWGVFVALPDAGGVEGLVHMSEASH-DRGAKLADLFKPGAEIDVKVLR 462 Query: 335 IDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLS 394 +D+ + ++ L K +PW E + G R +GK+ + FG FI L+ GIDGL+H + Sbjct: 463 VDD-KGKLWLSRKAATVDPWDAVKEKYAVGTRHKGKVARLQPFGAFIELEPGIDGLIHTA 521 Query: 395 DISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIV 454 D+S + K GD++ VV DA RI L E + ++G V Sbjct: 522 DLSMKPI-QHPNEVVKVGDDVDVVVATCDAAGRRIGL-HPAPPEGEESEPRQRVQQGKAV 579 Query: 455 TGKVTAVDAKGATVEL----ADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDR 510 VT V G V + G++ A R D +G +++AK VD Sbjct: 580 KVAVTQVTEGGLVVRVLGTTGRAARGFIPAGHTGTQRGTDLRKEFPIGTQLDAKIIEVDP 639 Query: 511 KNRAISLSVRAKDEADEKDA 530 + LS+RA E EK A Sbjct: 640 RRGEAKLSIRALKEDAEKQA 659 >UniRef50_D2RKJ8 Hydroxymethylbutenyl pyrophosphate reductase n=3 Tax=Veillonellaceae RepID=D2RKJ8_ACIFE Length = 680 Score = 169 bits (428), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 101/308 (32%), Positives = 174/308 (56%), Gaps = 20/308 (6%) Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 ++ GD+V + + A E+ G +LSR KA+ +AW+ L + D +TV VKGG T Sbjct: 339 VKPGDKVTLKVIASENQDGLVVLSRTKAEADQAWLKLPEELADKKTVQVKGLRAVKGGLT 398 Query: 122 VELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 V G+ F+P S +D++ V D EGK+LE +++++ ++ +V SRR V+ E +A+ Sbjct: 399 VSYEGLTGFIPASHLDLKHVDDVKEYEGKDLEVSLLEINPEKKRLVFSRRNVLREERAAK 458 Query: 182 R------------------DQLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITD 222 ++ + EG V+G +K++ D+G FV++ V GL+HI++ Sbjct: 459 NAAWKEERAKREEERHEALEKAFQTFHEGETVEGTIKSIVDFGMFVEIAPMVQGLVHISE 518 Query: 223 MAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTG 282 ++W R P+++ VG++I V + D E+ R+SL +K L EDPWVA AK + G +TG Sbjct: 519 VSWDRSVKPADLYKVGEKINVYIKGLDEEKGRISLSVKALQEDPWVAAAKEFRVGDVVTG 578 Query: 283 RVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRI 342 V +G V++ + EG++H+SE+ + P V+ +G V+V VL +D E ++I Sbjct: 579 TVVRFLPFGAIVKLNDKNEGMIHISEIA-EQRIDKPEDVLEIGQEVKVKVLRVDTEHKKI 637 Query: 343 SLGLKQCK 350 +L + + K Sbjct: 638 ALSITKAK 645 Score = 104 bits (259), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 97/323 (30%), Positives = 163/323 (50%), Gaps = 37/323 (11%) Query: 235 VNVGDEITVKVLKFDRERTRVSLG-LKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDY-GC 292 V GD++T+KV+ + + V L K + W+ + + + K T +V L G Sbjct: 339 VKPGDKVTLKVIASENQDGLVVLSRTKAEADQAWLKLPEELAD--KKTVQVKGLRAVKGG 396 Query: 293 FVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQ---- 348 EG+ G + S +D K++ K G +EV +L+I+ E++R+ + Sbjct: 397 LTVSYEGLTGFIPASHLDL--KHVDDVKEYE-GKDLEVSLLEINPEKKRLVFSRRNVLRE 453 Query: 349 ---CKANPW---------------QQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGL 390 K W ++ +T ++G+ VEG IKSI DFG+F+ + + GL Sbjct: 454 ERAAKNAAWKEERAKREEERHEALEKAFQTFHEGETVEGTIKSIVDFGMFVEIAPMVQGL 513 Query: 391 VHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKK 450 VH+S++SW+ + + A YK G++I + +D E+ RISL VK L EDP WVA K+ Sbjct: 514 VHISEVSWDRSVKPA-DLYKVGEKINVYIKGLDEEKGRISLSVKALQEDP---WVAAAKE 569 Query: 451 GAIVTGKVTAVD---AKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTG 507 + V GA V+L D EG + SE + R++ VL +G EV+ K Sbjct: 570 FRVGDVVTGTVVRFLPFGAIVKLNDKNEGMIHISEIAEQRIDKPEDVLEIGQEVKVKVLR 629 Query: 508 VDRKNRAISLSV-RAKDEADEKD 529 VD +++ I+LS+ +AK++A++ + Sbjct: 630 VDTEHKKIALSITKAKEDAEKAE 652 Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 58/215 (26%), Positives = 105/215 (48%), Gaps = 31/215 (14%) Query: 83 LLSREKAKRHEAWI------------TLEKAYE---DAETVTGVINGKVKGGFTVELNGI 127 +L E+A ++ AW LEKA++ + ETV G I V G VE+ Sbjct: 450 VLREERAAKNAAWKEERAKREEERHEALEKAFQTFHEGETVEGTIKSIVDFGMFVEI--- 506 Query: 128 RAFLPGSLVDV------RPVRDT-LHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 A + LV + R V+ L+ G+++ + LD+++ + +S +A+ E A Sbjct: 507 -APMVQGLVHISEVSWDRSVKPADLYKVGEKINVYIKGLDEEKGRISLSVKALQEDPWVA 565 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVD-GLLHITDMAWKRVKHPSEIVNVGD 239 + + G V G V +GA V L + G++HI+++A +R+ P +++ +G Sbjct: 566 AAKEF----RVGDVVTGTVVRFLPFGAIVKLNDKNEGMIHISEIAEQRIDKPEDVLEIGQ 621 Query: 240 EITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRY 274 E+ VKVL+ D E +++L + + ED A ++Y Sbjct: 622 EVKVKVLRVDTEHKKIALSITKAKEDAEKAEMRQY 656 >UniRef50_C9XMD9 Putative 30S ribosomal protein S1 n=7 Tax=Clostridium RepID=C9XMD9_CLODC Length = 424 Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 107/377 (28%), Positives = 181/377 (48%), Gaps = 37/377 (9%) Query: 19 RPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQF---KNAQGELEIQVGDEVDVALDAV 75 + G + G + A+ D V + + IP + KN E +GDE+ + V Sbjct: 25 KVGELTTGKITAVRNDEVQLGLDYGFDGIIPISELNIEKNQYIEDIYHIGDEITAVITKV 84 Query: 76 EDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSL 135 G LS+ + + + L+KAY++ +T + + G N F+P S Sbjct: 85 SQKDGTITLSKLQLDKRNDFAELQKAYDEHRIITVNVEKNIDKGVFANYNTYTFFIPISQ 144 Query: 136 VDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVS---------------RRAVIESENSA 180 +D + + DT G LE + +LD ++N +V S RRA I++E A Sbjct: 145 LDTKFITDTSKFVGLNLEVYIKELDVRKNRLVASHRDVLQERINKEREERRAQIKAEKEA 204 Query: 181 ER------------------DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITD 222 ER + L +L+ G + G V + YGAFVD+GG++GL HI + Sbjct: 205 ERARIKQEREEEKARIKAAKEDLFNSLEVGQKRDGKVTKIMPYGAFVDIGGIEGLAHINN 264 Query: 223 MAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTG 282 +AW RV+ ++V+ G E+ V VL ++E +++L LK + DPW IAK + Sbjct: 265 LAWTRVESVEDVVSEGQEVEVYVLDVNKETKKIALALKDINNDPWDLIAKEVQIDDVVNA 324 Query: 283 RVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRI 342 +V + + G FV+I+EGV+ + +SE+ T + + VVN+GD V+V +LD + +R+ Sbjct: 325 KVLRIIEKGAFVQIKEGVDAYLPISELSDT-RVAKVTNVVNIGDEVKVKILDFKPKTKRM 383 Query: 343 SLGLKQCKANPWQQFAE 359 + +K+ P + E Sbjct: 384 LVSIKEATREPEEDITE 400 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 98/380 (25%), Positives = 178/380 (46%), Gaps = 52/380 (13%) Query: 213 GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGE-DPWVAIA 271 G DG++ I+++ ++ ++ +I ++GDEIT + K ++ ++L QL + + + + Sbjct: 49 GFDGIIPISELNIEKNQYIEDIYHIGDEITAVITKVSQKDGTITLSKLQLDKRNDFAELQ 108 Query: 272 KRYPEGTKLT---------GRVTNLTDYGCFVEIEE-------------GVEGLVHVSEM 309 K Y E +T G N Y F+ I + G+ V++ E+ Sbjct: 109 KAYDEHRIITVNVEKNIDKGVFANYNTYTFFIPISQLDTKFITDTSKFVGLNLEVYIKEL 168 Query: 310 DWTNKNIHPSKVVNVGDVVEVMVLDIDEERR------------RISLGLKQCKANPWQQF 357 D + V + DV++ + EERR RI ++ KA Sbjct: 169 DVRKNRL----VASHRDVLQERINKEREERRAQIKAEKEAERARIKQEREEEKARIKAAK 224 Query: 358 AETHNK---GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNV--AGEEAVREYKKG 412 + N G + +GK+ I +G F+ + GGI+GL H+++++W + E+ V E G Sbjct: 225 EDLFNSLEVGQKRDGKVTKIMPYGAFVDI-GGIEGLAHINNLAWTRVESVEDVVSE---G 280 Query: 413 DEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELAD 472 E+ VL V+ E ++I+L +K + DP++ + +V KV + KGA V++ + Sbjct: 281 QEVEVYVLDVNKETKKIALALKDINNDPWDLIAKEVQIDDVVNAKVLRIIEKGAFVQIKE 340 Query: 473 GVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIA 532 GV+ YL SE S RV T V+++GDEV+ K K + + +S++ E+D Sbjct: 341 GVDAYLPISELSDTRVAKVTNVVNIGDEVKVKILDFKPKTKRMLVSIKEATREPEEDITE 400 Query: 533 TVNKQEDANFSNNAMAEAFK 552 + +E S ++ E FK Sbjct: 401 YLEVEE----SLGSIGELFK 416 Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 91/376 (24%), Positives = 165/376 (43%), Gaps = 58/376 (15%) Query: 108 VTGVINGKVKGGFTVELNGIRAFLPGSLVDV---RPVRDTLHLEGKELEFKVIKLDQKRN 164 +T V N +V+ G +GI +P S +++ + + D H+ G E+ + K+ QK Sbjct: 34 ITAVRNDEVQLGLDYGFDGI---IPISELNIEKNQYIEDIYHI-GDEITAVITKVSQKDG 89 Query: 165 NVVVSRRAVIESENSAERDQLLENLQEGMEVKGIV-----KNLTDYGAFVDLGGVDGLLH 219 + +S+ + + + AE LQ+ + I+ KN+ D G F + + Sbjct: 90 TITLSKLQLDKRNDFAE-------LQKAYDEHRIITVNVEKNI-DKGVFANYNTYTFFIP 141 Query: 220 ITDMAWKRVKHPSEIVNVGDEITVKVL-----------------KFDRERTRVSLGLKQL 262 I+ + K + S+ V + E+ +K L + ++ER +K Sbjct: 142 ISQLDTKFITDTSKFVGLNLEVYIKELDVRKNRLVASHRDVLQERINKEREERRAQIKAE 201 Query: 263 GEDPWVAIAKRYPE------------------GTKLTGRVTNLTDYGCFVEIEEGVEGLV 304 E I + E G K G+VT + YG FV+I G+EGL Sbjct: 202 KEAERARIKQEREEEKARIKAAKEDLFNSLEVGQKRDGKVTKIMPYGAFVDIG-GIEGLA 260 Query: 305 HVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKG 364 H++ + WT VV+ G VEV VLD+++E ++I+L LK +PW A+ Sbjct: 261 HINNLAWTRVE-SVEDVVSEGQEVEVYVLDVNKETKKIALALKDINNDPWDLIAKEVQID 319 Query: 365 DRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDA 424 D V K+ I + G F+ + G+D + +S++S + + GDE+ +L Sbjct: 320 DVVNAKVLRIIEKGAFVQIKEGVDAYLPISELS-DTRVAKVTNVVNIGDEVKVKILDFKP 378 Query: 425 ERERISLGVKQLAEDP 440 + +R+ + +K+ +P Sbjct: 379 KTKRMLVSIKEATREP 394 >UniRef50_A4N3Y6 30S ribosomal protein S1 n=2 Tax=Haemophilus influenzae RepID=A4N3Y6_HAEIN Length = 135 Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 87/143 (60%), Positives = 111/143 (77%), Gaps = 8/143 (5%) Query: 415 IAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGV 474 ++AVVL VDA +ERISLG+KQL EDPFNN+VA+NKKGA+V+ V DAKGA VELA GV Sbjct: 1 MSAVVLAVDAVKERISLGIKQLEEDPFNNFVAINKKGAVVSATVVEADAKGAKVELAGGV 60 Query: 475 EGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATV 534 EGY+R++ D T ++VGD VEAK+TGVDRK+R + LSV+AKD+A+E A+A+V Sbjct: 61 EGYIRSA--------DLTNEVAVGDVVEAKYTGVDRKSRIVHLSVKAKDQAEEAAAVASV 112 Query: 535 NKQEDANFSNNAMAEAFKAAKGE 557 N +++ NAMAEAFKAAKGE Sbjct: 113 NNKQEDIVIPNAMAEAFKAAKGE 135 Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 40/106 (37%), Positives = 55/106 (51%), Gaps = 15/106 (14%) Query: 245 VLKFDRERTRVSLGLKQLGEDP---WVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVE 301 VL D + R+SLG+KQL EDP +VAI K+ G ++ V G VE+ GVE Sbjct: 5 VLAVDAVKERISLGIKQLEEDPFNNFVAINKK---GAVVSATVVEADAKGAKVELAGGVE 61 Query: 302 GLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLK 347 G ++ D TN+ V VGDVVE +D + R + L +K Sbjct: 62 G--YIRSADLTNE-------VAVGDVVEAKYTGVDRKSRIVHLSVK 98 Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 9/104 (8%) Query: 331 MVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGL 390 +VL +D + RISLG+KQ + +P+ F + KG V + G + L GG++G Sbjct: 4 VVLAVDAVKERISLGIKQLEEDPFNNFVAINKKGAVVSATVVEADAKGAKVELAGGVEGY 63 Query: 391 VHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVK 434 + +D++ VA GD + A VD + + L VK Sbjct: 64 IRSADLTNEVA---------VGDVVEAKYTGVDRKSRIVHLSVK 98 >UniRef50_A8V2R4 Ribosomal protein S01 n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V2R4_9AQUI Length = 368 Score = 144 bits (364), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 110/360 (30%), Positives = 183/360 (50%), Gaps = 24/360 (6%) Query: 21 GSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGFG 80 G I+ G +V VD G K+ES I E+ + +Q G ++ G Sbjct: 24 GDILEGEIVKFADKYAFVDVGQKTESVINKEEVEG------LQEGAKIRAVFTGKRTSEG 77 Query: 81 ETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRP 140 LLSR+ EA +E AY++ E V + +++ GF V+L GI+AFLP S ++ Sbjct: 78 YNLLSRKPLIFREALEKVENAYKNQEKVPAKLKKQLEKGFLVDLGGIQAFLPYSESGLKK 137 Query: 141 VRDTLHLEGKELEFKVIKLDQKRN--NVVVSRRAVIESENSAERDQLLENLQEGMEVKGI 198 +E E ++KLD+ R N+VVSR+ V+E E ++++L ++EGM + Sbjct: 138 EEKL----PEEFEVYILKLDKNRKIPNIVVSRKKVLEEEKQKKKEKLWSEIKEGMTIPAK 193 Query: 199 VKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSL 257 V + D GA V +G + G L + +W R K ++ G EI KV++ D E+ ++ L Sbjct: 194 VVKVQDNGAVVIIGDLIYGFLPASLYSWYREKSIKDL-QKGQEIEAKVVQKDTEKQKLIL 252 Query: 258 GLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIH 317 K L E+PW Y EG +T + + YG V++ E ++G +H SE D ++H Sbjct: 253 STKALEENPWEKFP--YSEGDIVTTVIKEINPYGLVVKV-ENLQGFIHKSETD----HLH 305 Query: 318 PSKV---VNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSI 374 P + G V+ ++++D E +++ L +KQ NP +F + H +G+ + KIK+I Sbjct: 306 PERFKSKFKEGQEVQAKIIELDRENQKLKLSIKQATENPLDKFLKEHPEGETITAKIKNI 365 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 75/309 (24%), Positives = 149/309 (48%), Gaps = 31/309 (10%) Query: 167 VVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWK 226 ++SR+ +I E + + +N QE + K +K + G VDLGG+ L ++ K Sbjct: 80 LLSRKPLIFREALEKVENAYKN-QEKVPAK--LKKQLEKGFLVDLGGIQAFLPYSESGLK 136 Query: 227 RVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDP----------WVAIAKRYPE 276 + + + +E V +LK D+ R ++ + + W I E Sbjct: 137 KEE------KLPEEFEVYILKLDKNRKIPNIVVSRKKVLEEEKQKKKEKLWSEIK----E 186 Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTN-KNIHPSKVVNVGDVVEVMVLDI 335 G + +V + D G V I + + G + S W K+I K + G +E V+ Sbjct: 187 GMTIPAKVVKVQDNGAVVIIGDLIYGFLPASLYSWYREKSI---KDLQKGQEIEAKVVQK 243 Query: 336 DEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSD 395 D E++++ L K + NPW++F +++GD V IK I +G+ + ++ + G +H S+ Sbjct: 244 DTEKQKLILSTKALEENPWEKFP--YSEGDIVTTVIKEINPYGLVVKVEN-LQGFIHKSE 300 Query: 396 ISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVT 455 ++ E ++K+G E+ A ++++D E +++ L +KQ E+P + ++ + +G +T Sbjct: 301 TD-HLHPERFKSKFKEGQEVQAKIIELDRENQKLKLSIKQATENPLDKFLKEHPEGETIT 359 Query: 456 GKVTAVDAK 464 K+ + K Sbjct: 360 AKIKNIKTK 368 Score = 68.2 bits (165), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 66/287 (22%), Positives = 126/287 (43%), Gaps = 33/287 (11%) Query: 254 RVSLGLKQLGEDPWV------AIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVS 307 R S G L P + + Y K+ ++ + G V++ G++ + S Sbjct: 73 RTSEGYNLLSRKPLIFREALEKVENAYKNQEKVPAKLKKQLEKGFLVDLG-GIQAFLPYS 131 Query: 308 EMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP----------WQQF 357 E + P + EV +L +D+ R+ ++ + + K W + Sbjct: 132 ESGLKKEEKLPEEF-------EVYILKLDKNRKIPNIVVSRKKVLEEEKQKKKEKLWSEI 184 Query: 358 AETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAA 417 E G + K+ + D G + + I G + S SW E+++++ +KG EI A Sbjct: 185 KE----GMTIPAKVVKVQDNGAVVIIGDLIYGFLPASLYSW--YREKSIKDLQKGQEIEA 238 Query: 418 VVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGY 477 V+Q D E++++ L K L E+P+ + +G IVT + ++ G V++ + ++G+ Sbjct: 239 KVVQKDTEKQKLILSTKALEENPWEKFPY--SEGDIVTTVIKEINPYGLVVKV-ENLQGF 295 Query: 478 LRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDE 524 + SE E G EV+AK +DR+N+ + LS++ E Sbjct: 296 IHKSETDHLHPERFKSKFKEGQEVQAKIIELDRENQKLKLSIKQATE 342 >UniRef50_A5V0B5 RNA binding S1 domain protein n=3 Tax=Chloroflexaceae RepID=A5V0B5_ROSS1 Length = 514 Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 98/275 (35%), Positives = 152/275 (55%), Gaps = 23/275 (8%) Query: 176 SENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEI 234 +E + R + +++L GME++G V ++ YG FVD+G G DGL+HI++M+ R++ PS++ Sbjct: 126 AEETPGRPRRVKDLAPGMELEGRVTSIALYGIFVDIGVGRDGLVHISEMSDTRIESPSDL 185 Query: 235 VNVGDEITVKVLKFDRERTRVSLGL--KQLGEDPWVAIAKRYPE-----------GTKLT 281 V +GD + V+V + + R+SL + K+ +P K+ PE G + Sbjct: 186 VKIGDTVKVRVKSVEPDGRRISLTMRTKERSAEPRSGRGKKKPEVDYEKLAALRVGDNVE 245 Query: 282 GRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRR 341 G VT + +G FV+I G +GLVHVSE+ + VV VG VL++D R Sbjct: 246 GTVTGMAPFGVFVDIGVGKDGLVHVSEL-AEGRVEKAEDVVQVGQTYTFKVLEVDAAGAR 304 Query: 342 ISLGLKQC-KANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDIS-WN 399 ISL L++ + QQ KG +EG I + FG F+ + G DGLVH+S++S + Sbjct: 305 ISLSLRRAQRGQKLQQL----EKGQILEGTISGLAPFGAFVDIGVGRDGLVHISELSNTH 360 Query: 400 VAGEEAVREYKKGDEIAAVVLQVDAERERISLGVK 434 VA E V K GD + VL VD + +RISL ++ Sbjct: 361 VARVEDV--VKVGDRVQVRVLDVDPQSKRISLSLR 393 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 90/261 (34%), Positives = 140/261 (53%), Gaps = 20/261 (7%) Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDID 336 G +L GRVT++ YG FV+I G +GLVH+SEM T PS +V +GD V+V V ++ Sbjct: 142 GMELEGRVTSIALYGIFVDIGVGRDGLVHISEMSDTRIE-SPSDLVKIGDTVKVRVKSVE 200 Query: 337 EERRRISLGL--KQCKANP------------WQQFAETHNKGDRVEGKIKSITDFGIFIG 382 + RRISL + K+ A P +++ A GD VEG + + FG+F+ Sbjct: 201 PDGRRISLTMRTKERSAEPRSGRGKKKPEVDYEKLAALR-VGDNVEGTVTGMAPFGVFVD 259 Query: 383 LDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFN 442 + G DGLVH+S+++ E+A + G VL+VDA RISL +++ Sbjct: 260 IGVGKDGLVHVSELAEGRV-EKAEDVVQVGQTYTFKVLEVDAAGARISLSLRRAQR---G 315 Query: 443 NWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVE 502 + +KG I+ G ++ + GA V++ G +G + SE S V V+ VGD V+ Sbjct: 316 QKLQQLEKGQILEGTISGLAPFGAFVDIGVGRDGLVHISELSNTHVARVEDVVKVGDRVQ 375 Query: 503 AKFTGVDRKNRAISLSVRAKD 523 + VD +++ ISLS+R +D Sbjct: 376 VRVLDVDPQSKRISLSLRLED 396 >UniRef50_C6JH83 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C6JH83_9FIRM Length = 302 Score = 142 bits (357), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 83/235 (35%), Positives = 136/235 (57%), Gaps = 6/235 (2%) Query: 9 FEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQG---ELEIQVG 65 E S K+IE G I+ G V+++D+ V+VD +E IPAE + G + ++ VG Sbjct: 12 LEASFKKIEE--GDILTGTVISVDEKEVVVDLKYYAEGIIPAEDYSREPGFSLKEQVNVG 69 Query: 66 DEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN 125 DEV + +DG G LLSR +A AW L++ + E + V+ G V GG + Sbjct: 70 DEVSATVVRKDDGNGNILLSRTEAADVLAWDKLKELKDSKEVIDVVVKGIVNGGVIAYVE 129 Query: 126 GIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQL 185 G+R F+P S + + V DT K ++ +V +D+++ +++S + ++ + ER Sbjct: 130 GVRGFIPASKLALNYVEDTNEYLNKPIQVQVFDIDKEKGRLILSAKEILREKAEEERKTK 189 Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGD 239 + N+Q G+ +G+V++L YGAFVDLG G+ GL+HI+ + KR+K PSE++ VGD Sbjct: 190 ISNVQVGLVTEGVVESLQPYGAFVDLGNGLSGLVHISQICEKRIKKPSEVLTVGD 244 Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 58/234 (24%), Positives = 109/234 (46%), Gaps = 12/234 (5%) Query: 272 KRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNK-NIHPSKVVNVGDVVEV 330 K+ EG LTG V ++ + V+++ EG++ D++ + + VNVGD V Sbjct: 17 KKIEEGDILTGTVISVDEKEVVVDLKYYAEGIIPAE--DYSREPGFSLKEQVNVGDEVSA 74 Query: 331 MVLDIDEERRRISLGLKQCK-ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDG 389 V+ D+ I L + W + E + + ++ +K I + G+ ++G + G Sbjct: 75 TVVRKDDGNGNILLSRTEAADVLAWDKLKELKDSKEVIDVVVKGIVNGGVIAYVEG-VRG 133 Query: 390 LVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQL----AEDPFNNWV 445 + S ++ N E EY I V +D E+ R+ L K++ AE+ + Sbjct: 134 FIPASKLALNYV--EDTNEYL-NKPIQVQVFDIDKEKGRLILSAKEILREKAEEERKTKI 190 Query: 446 ALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGD 499 + + G + G V ++ GA V+L +G+ G + S+ R++ + VL+VGD Sbjct: 191 SNVQVGLVTEGVVESLQPYGAFVDLGNGLSGLVHISQICEKRIKKPSEVLTVGD 244 >UniRef50_UPI000169A712 ribosomal protein S1 n=1 Tax=Yersinia pestis FV-1 RepID=UPI000169A712 Length = 88 Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 76/89 (85%), Positives = 83/89 (93%), Gaps = 2/89 (2%) Query: 470 LADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKD 529 +A GVEGYLRA EA+RDRVEDATLVL+VGDEVEAK+TGVDRKNR ISLSVRAKDEADEKD Sbjct: 1 MAGGVEGYLRAFEATRDRVEDATLVLNVGDEVEAKYTGVDRKNRVISLSVRAKDEADEKD 60 Query: 530 AIATVN-KQEDANFSNNAMAEAFKAAKGE 557 AIATVN K E++NFS +AMAEAFKAAKGE Sbjct: 61 AIATVNTKPEESNFS-SAMAEAFKAAKGE 88 >UniRef50_B9L9K6 30S ribosomal protein S1 n=2 Tax=Nautiliaceae RepID=B9L9K6_NAUPA Length = 386 Score = 138 bits (348), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 108/363 (29%), Positives = 184/363 (50%), Gaps = 37/363 (10%) Query: 80 GETLLSREKAKRHEAWITLEKAY---------EDAETVTGVINGKVKG-GFTVELNGIRA 129 G+T+ + K + + + KAY A+ V + KVK G ++++GI Sbjct: 48 GKTVKAYVKEFKQNSVVVDRKAYLNDIKAKLESKADEVIDAVVTKVKPKGIVIDVDGISG 107 Query: 130 FLPGSLVDVRPVRDTLHL-EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLEN 188 F+P + + + ++ EG E++ K+I D R + + N E ++ Sbjct: 108 FVPKEEIFYKKIDHRQYISEGDEVQVKLI--DPVRRIFSIKKTL----PNPWEE---VKE 158 Query: 189 LQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLK 247 L G VK V ++TDYGAFVDLG GV+G LHI+++ W + + +GDEI V++++ Sbjct: 159 LNIGDVVKVSVSHITDYGAFVDLGNGVEGFLHISEINWDGIND----LTLGDEIEVEIVE 214 Query: 248 FDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVS 307 + E ++ + K L P V + + G + G +T + G FVEI+ G+ L+ + Sbjct: 215 INPEEEKLRVSRKNLLTKPAVIFNENHNVGDIVEGVITKFINVGAFVEID-GISTLLP-N 272 Query: 308 EMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRV 367 + K +++ N+GD +E ++ I E ++ + K NP+ FA+TH GD V Sbjct: 273 KFASFKKGEKANEIFNIGDKLEFKIITISPEENKVIVSRKDAMPNPYDSFAQTHQVGDEV 332 Query: 368 EGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERE 427 EGK+K ITDFG+FI L G I+ LV D + EY GDE +++++ ER Sbjct: 333 EGKVKYITDFGMFIDL-GDIEALVRKEDFN---------NEYNIGDEFKGKIIEINGERV 382 Query: 428 RIS 430 +++ Sbjct: 383 KLA 385 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 107/397 (26%), Positives = 203/397 (51%), Gaps = 39/397 (9%) Query: 116 VKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAV-- 173 +KGGF ++G FLP SL ++ + GK ++ V + K+N+VVV R+A Sbjct: 18 IKGGFVGYVDGQEIFLPKSLSGLKEDESVI---GKTVKAYVKEF--KQNSVVVDRKAYLN 72 Query: 174 -IESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPS 232 I+++ ++ D++++ + ++ KGIV +D+ G+ G + ++ +K++ H Sbjct: 73 DIKAKLESKADEVIDAVVTKVKPKGIV---------IDVDGISGFVPKEEIFYKKIDH-R 122 Query: 233 EIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGC 292 + ++ GDE+ VK++ + R +K+ +PW + K G + V+++TDYG Sbjct: 123 QYISEGDEVQVKLI----DPVRRIFSIKKTLPNPWEEV-KELNIGDVVKVSVSHITDYGA 177 Query: 293 FVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN 352 FV++ GVEG +H+SE++W N + +GD +EV +++I+ E ++ + K Sbjct: 178 FVDLGNGVEGFLHISEINWDGIN-----DLTLGDEIEVEIVEINPEEEKLRVSRKNLLTK 232 Query: 353 PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKG 412 P F E HN GD VEG I + G F+ +DG I L+ S+ GE+A + G Sbjct: 233 PAVIFNENHNVGDIVEGVITKFINVGAFVEIDG-ISTLLPNKFASFK-KGEKANEIFNIG 290 Query: 413 DEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELAD 472 D++ ++ + E ++ + K +P++++ ++ G V GKV + G ++L D Sbjct: 291 DKLEFKIITISPEENKVIVSRKDAMPNPYDSFAQTHQVGDEVEGKVKYITDFGMFIDLGD 350 Query: 473 GVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVD 509 +E +R ED ++GDE + K ++ Sbjct: 351 -IEALVRK--------EDFNNEYNIGDEFKGKIIEIN 378 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 68/235 (28%), Positives = 122/235 (51%), Gaps = 14/235 (5%) Query: 284 VTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRIS 343 VT + G ++++ G+ G V E+ + K I + ++ GD V+V ++D RRI Sbjct: 90 VTKVKPKGIVIDVD-GISGFVPKEEIFY--KKIDHRQYISEGDEVQVKLID---PVRRI- 142 Query: 344 LGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGE 403 +K+ NPW++ E N GD V+ + ITD+G F+ L G++G +H+S+I+W Sbjct: 143 FSIKKTLPNPWEEVKEL-NIGDVVKVSVSHITDYGAFVDLGNGVEGFLHISEINW----- 196 Query: 404 EAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDA 463 + + + GDEI +++++ E E++ + K L P + + G IV G +T Sbjct: 197 DGINDLTLGDEIEVEIVEINPEEEKLRVSRKNLLTKPAVIFNENHNVGDIVEGVITKFIN 256 Query: 464 KGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLS 518 GA VE+ DG+ L AS + E A + ++GD++E K + + + +S Sbjct: 257 VGAFVEI-DGISTLLPNKFASFKKGEKANEIFNIGDKLEFKIITISPEENKVIVS 310 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 49/163 (30%), Positives = 80/163 (49%), Gaps = 15/163 (9%) Query: 358 AETHNKGDRV-EGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREY-KKGDEI 415 A+ +K D V + + + GI I +DG I G V +I + R+Y +GDE+ Sbjct: 76 AKLESKADEVIDAVVTKVKPKGIVIDVDG-ISGFVPKEEIFYKKIDH---RQYISEGDEV 131 Query: 416 AAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVE 475 V +D R S +K+ +P+ LN G +V V+ + GA V+L +GVE Sbjct: 132 Q--VKLIDPVRRIFS--IKKTLPNPWEEVKELNI-GDVVKVSVSHITDYGAFVDLGNGVE 186 Query: 476 GYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLS 518 G+L SE + D + D TL GDE+E + ++ + + +S Sbjct: 187 GFLHISEINWDGINDLTL----GDEIEVEIVEINPEEEKLRVS 225 >UniRef50_B2KCI0 RNA binding S1 domain protein n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KCI0_ELUMP Length = 399 Score = 138 bits (347), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 102/365 (27%), Positives = 190/365 (52%), Gaps = 24/365 (6%) Query: 7 QLF---EESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQ 63 QLF EE + ++ R IV+ VV + KD VLVD G K E IP F +G+ + Sbjct: 30 QLFAEQEELVNKLNKR--EIVQVTVVQVGKDSVLVDTGDKKEGYIPLSDF---EGKAVPE 84 Query: 64 VGDEVDVALDAVEDGFGE--TLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 G++V L V+ G E +LS +KA+ + W +KA+++ E V G I VKGG+ Sbjct: 85 AGEKVSAVL--VKKGSDERHAVLSFKKAQEYLGWEIAKKAFDNKERVRGTIVSCVKGGYI 142 Query: 122 VELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 V++ G+ F+P SL ++ G +++ V++ +++N ++VSR+ V+E + + Sbjct: 143 VDVFGVSGFMPLSLSELHTAYKHYLPAGAKVKCVVVEFSKEKNKLIVSRKQVLEEDEAVR 202 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEI 241 RD +L ++EG ++ +V ++ G++G++ + ++AW+ + G + Sbjct: 203 RDGVLAQVKEGEVLRVVVAKADKDKLYLRFHGIEGVVTLDNVAWQDTEKAITSFRRGQRL 262 Query: 242 TVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI-EEGV 300 K+LK D+E ++ GLKQL +P A+ +++P + G++ +T+ G V + + Sbjct: 263 KAKLLKIDKETGKLEFGLKQLFLNPADALRRKFPYKSTTKGKIVAITEEGVEVSLGKNNT 322 Query: 301 EGLVHVSEM--DWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFA 358 +G + EM D+ NV DV+ VMV+ I+ + ++L +K+ ++F Sbjct: 323 KGFISQFEMGRDFDG---------NVDDVINVMVIGINPDDCSVNLSVKKYDQVQNKKFV 373 Query: 359 ETHNK 363 + K Sbjct: 374 AQYMK 378 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 66/275 (24%), Positives = 114/275 (41%), Gaps = 42/275 (15%) Query: 195 VKGIVKNLTDYGAFVDLGGVDGLLHIT----DMAWKRVKHPSEIVNVGDEITVKVLKFDR 250 V+G + + G VD+ GV G + ++ A+K + G ++ V++F + Sbjct: 129 VRGTIVSCVKGGYIVDVFGVSGFMPLSLSELHTAYKH------YLPAGAKVKCVVVEFSK 182 Query: 251 ERTRVSLGLKQ-LGEDPWV---AIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHV 306 E+ ++ + KQ L ED V + + EG L V ++ G+EG+V + Sbjct: 183 EKNKLIVSRKQVLEEDEAVRRDGVLAQVKEGEVLRVVVAKADKDKLYLRFH-GIEGVVTL 241 Query: 307 SEMDW--TNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKG 364 + W T K I + G ++ +L ID+E ++ GLKQ NP Sbjct: 242 DNVAWQDTEKAITSFRR---GQRLKAKLLKIDKETGKLEFGLKQLFLNPADALRRKFPYK 298 Query: 365 DRVEGKIKSITDFGIFIGL------------------DGGIDGLVHLSDISWNVAGEEAV 406 +GKI +IT+ G+ + L DG +D ++++ I N Sbjct: 299 STTKGKIVAITEEGVEVSLGKNNTKGFISQFEMGRDFDGNVDDVINVMVIGINPDDCSVN 358 Query: 407 REYKKGDEIA--AVVLQVDAERERISLGVKQLAED 439 KK D++ V Q + R +LG QL +D Sbjct: 359 LSVKKYDQVQNKKFVAQYMKQAPRPTLG--QLLQD 391 >UniRef50_B4UDY4 RNA binding S1 domain protein n=4 Tax=Anaeromyxobacter RepID=B4UDY4_ANASK Length = 537 Score = 138 bits (347), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 107/340 (31%), Positives = 169/340 (49%), Gaps = 24/340 (7%) Query: 21 GSIVRGVVVAIDKDVVLVDAGLK-SESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGF 79 G V G ++ I +DV ++ G +E+ I + K+ G + +VGD +D + D Sbjct: 156 GEKVAGKIIQIGEDVAFLELGSGVAEAMIETVELKDEAGNVAARVGDIIDAVVVKATDRG 215 Query: 80 GETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVR 139 +A R A + +A V GV+ KGG VE++G+RAF P S +DVR Sbjct: 216 AVVSKGHGRATRDNARDAVIEAAHTGLPVEGVVKAVNKGGLEVEVHGVRAFCPISQIDVR 275 Query: 140 PVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIV 199 V D G++L FKV + D + + V+SRRA++E E + + + L G G+V Sbjct: 276 FVGDASSFVGQKLLFKVTRADAR--DAVLSRRALLEEERAHKAAETRARLAPGAVFDGVV 333 Query: 200 KNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFD---RERTRVS 256 ++ DYGAFVD+GGV+GL+H++++AW RV P ++++ GD + V+VL+ D ++ R+ Sbjct: 334 TSVQDYGAFVDIGGVEGLVHVSELAWDRVSKPQDLLSAGDAVQVQVLRIDEDPKKGERIG 393 Query: 257 LGLKQLGEDPWVAIAKRYPE----------------GTKLTGRVTNLTDYGCFVEIEEGV 300 L +K L P A E G + V + +G FV G Sbjct: 394 LSVKALAPRPEPAAPAPGAEGAERPARPTPPPPPRVGDVVQATVDKVESFGVFVRFAGG- 452 Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERR 340 GLV SE T + + VGD ++ +V IDE+ R Sbjct: 453 RGLVPASET-GTPRGADLRRSFKVGDTLQALVSAIDEQGR 491 Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 67/258 (25%), Positives = 121/258 (46%), Gaps = 20/258 (7%) Query: 272 KRYPEGTKLTGRVTNLTDYGCFVEIEEGV-EGLVHVSEMDWTNKNIHPSKVVNVGDVVEV 330 +R+ G K+ G++ + + F+E+ GV E ++ E+ N+ VGD+++ Sbjct: 151 RRFQVGEKVAGKIIQIGEDVAFLELGSGVAEAMIETVELKDEAGNV----AARVGDIIDA 206 Query: 331 MVLDIDEERRRISLGL-KQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDG 389 +V+ + +S G + + N E + G VEG +K++ G+ + + G + Sbjct: 207 VVVKATDRGAVVSKGHGRATRDNARDAVIEAAHTGLPVEGVVKAVNKGGLEVEVHG-VRA 265 Query: 390 LVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNK 449 +S I G+ + G ++ V + DA R+ + L + L E+ + A + Sbjct: 266 FCPISQIDVRFVGDAS---SFVGQKLLFKVTRADA-RDAV-LSRRALLEEERAHKAAETR 320 Query: 450 ----KGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKF 505 GA+ G VT+V GA V++ GVEG + SE + DRV +LS GD V+ + Sbjct: 321 ARLAPGAVFDGVVTSVQDYGAFVDIG-GVEGLVHVSELAWDRVSKPQDLLSAGDAVQVQV 379 Query: 506 TGVD---RKNRAISLSVR 520 +D +K I LSV+ Sbjct: 380 LRIDEDPKKGERIGLSVK 397 Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 56/184 (30%), Positives = 87/184 (47%), Gaps = 28/184 (15%) Query: 358 AETHNK---GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWN-VAGEEAVREYKKGD 413 AET + G +G + S+ D+G F+ + GG++GLVH+S+++W+ V+ + + GD Sbjct: 317 AETRARLAPGAVFDGVVTSVQDYGAFVDI-GGVEGLVHVSELAWDRVSKPQDL--LSAGD 373 Query: 414 EIAAVVLQVDAER---ERISLGVKQLAEDPFNNWVALNKK----------------GAIV 454 + VL++D + ERI L VK LA P A + G +V Sbjct: 374 AVQVQVLRIDEDPKKGERIGLSVKALAPRPEPAAPAPGAEGAERPARPTPPPPPRVGDVV 433 Query: 455 TGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRA 514 V V++ G V A G G + ASE R D VGD ++A + +D + R Sbjct: 434 QATVDKVESFGVFVRFAGG-RGLVPASETGTPRGADLRRSFKVGDTLQALVSAIDEQGR- 491 Query: 515 ISLS 518 I LS Sbjct: 492 IRLS 495 >UniRef50_A9NGK8 Small subunit ribosomal protein S1 n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NGK8_ACHLI Length = 470 Score = 137 bits (346), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 115/438 (26%), Positives = 213/438 (48%), Gaps = 27/438 (6%) Query: 16 IETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQF-KNAQGELE--IQVGDEVDVAL 72 I + G I+ G V + K+ VL+D +E I AE F + A +L I+ GD+V + Sbjct: 5 IIPKKGQIIEGEVFQVKKNYVLLDINAATEGTIYAEYFDRPAPEDLRKVIKKGDKVRAKV 64 Query: 73 DAV--EDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAF 130 + + +D +LSR + ++KA+++ + V+ G + GI F Sbjct: 65 EKISEDDRSSLIMLSRLPLLHEKNMEKIQKAFDEKLEIETVVKSANDKGLVLNFEGIELF 124 Query: 131 LPGSLVDVRPVRDTLHLEGKEL-----EFKVIKLDQKRNNVVVSRRAVI-------ESEN 178 LP SL+D L G+ L EFK D+KR ++ +R+ + + + Sbjct: 125 LPYSLLDFELKDQKDKLIGQSLVVLIEEFKA---DRKRPKLIATRKPIFEARRQEEQQQR 181 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVG 238 R + LE + G ++G+V++ + AFV V G+L I+ ++ R+ +++ +G Sbjct: 182 QEARQEELETITTGAVLEGVVESFETHAAFVRFEHVSGMLRISQVSHHRIDKIEDVLEIG 241 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE 298 ++ VKV+K +E R+ L +K L P+ A K + G + G+V + +G VE++ Sbjct: 242 QKVQVKVIK--KEGNRLDLSMKALQPTPYEAYLKAHKVGETVKGKVVSKLPFGILVELDR 299 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFA 358 V+GL+H SE W N + + + D +E ++L D ++ RISL K + NPW + Sbjct: 300 DVKGLLHKSEYSW-NPQSNFDAYIKIDDEIEAVILSKDAKKERISLSKKVLEDNPWAKL- 357 Query: 359 ETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAV 418 G +E +I+ +T + + + +DG++ ++ + N Y+ GD + A Sbjct: 358 -NLRVGQDIEVRIEEVTKEEVKVSFE-SVDGIIPKNE-AHNDPKVNIDEYYQVGDTVKAK 414 Query: 419 VLQVDAERERISLGVKQL 436 V++ + + + L VK+L Sbjct: 415 VIEFNKQNWVLKLSVKRL 432 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 95/374 (25%), Positives = 181/374 (48%), Gaps = 26/374 (6%) Query: 160 DQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLH 219 D + + +++SR ++ +N +++ + E +E++ +VK+ D G ++ G++ L Sbjct: 70 DDRSSLIMLSRLPLLHEKNM---EKIQKAFDEKLEIETVVKSANDKGLVLNFEGIELFLP 126 Query: 220 ITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQL-----------GEDPWV 268 + + ++ +++ + ++ K DR+R ++ K + ++ Sbjct: 127 YSLLDFELKDQKDKLIGQSLVVLIEEFKADRKRPKLIATRKPIFEARRQEEQQQRQEARQ 186 Query: 269 AIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVV 328 + G L G V + + FV E V G++ +S++ + V+ +G V Sbjct: 187 EELETITTGAVLEGVVESFETHAAFVRFEH-VSGMLRISQVSHHRID-KIEDVLEIGQKV 244 Query: 329 EVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGID 388 +V V I +E R+ L +K + P++ + + H G+ V+GK+ S FGI + LD + Sbjct: 245 QVKV--IKKEGNRLDLSMKALQPTPYEAYLKAHKVGETVKGKVVSKLPFGILVELDRDVK 302 Query: 389 GLVHLSDISWNVAGEEAVREY-KKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVAL 447 GL+H S+ SWN + Y K DEI AV+L DA++ERISL K L ++P W L Sbjct: 303 GLLHKSEYSWN--PQSNFDAYIKIDDEIEAVILSKDAKKERISLSKKVLEDNP---WAKL 357 Query: 448 NKK-GAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFT 506 N + G + ++ V + V + V+G + +EA D + VGD V+AK Sbjct: 358 NLRVGQDIEVRIEEVTKEEVKVSF-ESVDGIIPKNEAHNDPKVNIDEYYQVGDTVKAKVI 416 Query: 507 GVDRKNRAISLSVR 520 +++N + LSV+ Sbjct: 417 EFNKQNWVLKLSVK 430 Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 77/303 (25%), Positives = 132/303 (43%), Gaps = 26/303 (8%) Query: 233 EIVNVGDEITVKVLKF---DRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTD 289 +++ GD++ KV K DR + L L E I K + E ++ V + D Sbjct: 52 KVIKKGDKVRAKVEKISEDDRSSLIMLSRLPLLHEKNMEKIQKAFDEKLEIETVVKSAND 111 Query: 290 YGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISL----- 344 G + E G+E + S +D+ K+ K +G + V++ + +R+R L Sbjct: 112 KGLVLNFE-GIELFLPYSLLDFELKD---QKDKLIGQSLVVLIEEFKADRKRPKLIATRK 167 Query: 345 --------GLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDI 396 +Q + Q+ ET G +EG ++S F+ + + G++ +S + Sbjct: 168 PIFEARRQEEQQQRQEARQEELETITTGAVLEGVVESFETHAAFVRFEH-VSGMLRISQV 226 Query: 397 SWN-VAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVT 455 S + + E V E G ++ V++ E R+ L +K L P+ ++ +K G V Sbjct: 227 SHHRIDKIEDVLEI--GQKVQVKVIK--KEGNRLDLSMKALQPTPYEAYLKAHKVGETVK 282 Query: 456 GKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAI 515 GKV + G VEL V+G L SE S + + + + DE+EA D K I Sbjct: 283 GKVVSKLPFGILVELDRDVKGLLHKSEYSWNPQSNFDAYIKIDDEIEAVILSKDAKKERI 342 Query: 516 SLS 518 SLS Sbjct: 343 SLS 345 >UniRef50_A9KQA3 RNA binding S1 domain protein n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KQA3_CLOPH Length = 303 Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 93/286 (32%), Positives = 149/286 (52%), Gaps = 14/286 (4%) Query: 5 FAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQGELE 61 F E SLK + G +V+G V+ I V VD SE I E+ N + + Sbjct: 11 FKTELEHSLKRL--TEGDLVKGTVIGISDTEVTVDLSYSSEGIIKLEELSNDPRFSIKAD 68 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 + +G+E+ A+ ED G LLS++KA +W L+ + T ++ V GG Sbjct: 69 VTIGEEI-TAMILSEDKEGNLLLSKKKADDILSWDKLKTMMTERTVTTVKVSNAVNGGVV 127 Query: 122 VELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 L GIRAF+P S++ + V D GK L+ VI D++ N +V+S + V+ E + E Sbjct: 128 TYLEGIRAFIPASMLSLSYVEDVSTFVGKVLKVIVITADKEANKLVLSAKEVLREEEAKE 187 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDE 240 + + +Q+G+ GIV L +GAFV +G G+ GL+HI+ + KR+K P+E++ G E Sbjct: 188 KSHKISQVQKGIVTTGIVDKLMPFGAFVSIGEGLSGLVHISQICGKRIKSPAEVLKEGQE 247 Query: 241 ITVKVLKFDRERTRVSLGLKQLGE-----DPWVAIAKRYPEGTKLT 281 + VKVL D + ++SL +K + + + V I Y G ++T Sbjct: 248 VKVKVL--DVKDGKISLSIKAVSDAEEVHEDAVDIPAEYSTGEQVT 291 Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 64/263 (24%), Positives = 122/263 (46%), Gaps = 17/263 (6%) Query: 272 KRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVM 331 KR EG + G V ++D V++ EG++ + E+ + V +G+ + M Sbjct: 20 KRLTEGDLVKGTVIGISDTEVTVDLSYSSEGIIKLEELS-NDPRFSIKADVTIGEEITAM 78 Query: 332 VLDIDEERRRISLGLKQCKAN---PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGID 388 +L D+E +L L + KA+ W + + K+ + + G+ L+G I Sbjct: 79 ILSEDKEG---NLLLSKKKADDILSWDKLKTMMTERTVTTVKVSNAVNGGVVTYLEG-IR 134 Query: 389 GLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDP----FNNW 444 + S +S + E V + G + +V+ D E ++ L K++ + ++ Sbjct: 135 AFIPASMLSLSYV--EDVSTFV-GKVLKVIVITADKEANKLVLSAKEVLREEEAKEKSHK 191 Query: 445 VALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAK 504 ++ +KG + TG V + GA V + +G+ G + S+ R++ VL G EV+ K Sbjct: 192 ISQVQKGIVTTGIVDKLMPFGAFVSIGEGLSGLVHISQICGKRIKSPAEVLKEGQEVKVK 251 Query: 505 FTGVDRKNRAISLSVRAKDEADE 527 +D K+ ISLS++A +A+E Sbjct: 252 V--LDVKDGKISLSIKAVSDAEE 272 >UniRef50_P73530 30S ribosomal protein S1 homolog A n=61 Tax=cellular organisms RepID=RS1A_SYNY3 Length = 328 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 86/277 (31%), Positives = 144/277 (51%), Gaps = 20/277 (7%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK-----NAQ 57 E FA L ++ + PG IV G V +++ L+D G K+ + IP ++ + + Sbjct: 15 EDFAALLDK--YDYHFSPGDIVAGTVFSMESRGALIDIGAKTAAYIPIQEMSINRVDDPE 72 Query: 58 GELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVK 117 L+ E + D EDG + LS + + AW + + + TV + + Sbjct: 73 EVLQPNETREFFILTDENEDG--QLTLSIRRIEYMRAWERVRQLQAEDATVRSNVFATNR 130 Query: 118 GGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVS-RRAVIES 176 GG V + G+R F+PGS + R ++ L G++L K +++D++RN +V+S RRA++E Sbjct: 131 GGALVRIEGLRGFIPGSHISAREAKEDL--VGEDLPLKFLEVDEERNRLVLSHRRALVER 188 Query: 177 ENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVN 236 + + L+ V G V+ + YGAF+D+GGV GLLHI++++ + P + N Sbjct: 189 K--------MNGLEVAQVVVGSVRGIKPYGAFIDIGGVSGLLHISEISHDHIDTPHSVFN 240 Query: 237 VGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKR 273 V DEI V ++ D ER R+SL KQL +P + R Sbjct: 241 VNDEIKVMIIDLDAERGRISLSTKQLEPEPGAMLKDR 277 Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 17/152 (11%) Query: 206 GAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGED 265 GA V + G+ G + + ++ + K VG+++ +K L+ D ER R+ L ++ Sbjct: 132 GALVRIEGLRGFIPGSHISAREAKEDL----VGEDLPLKFLEVDEERNRLVLSHRR---- 183 Query: 266 PWVAIAKRYPEGTKLT----GRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKV 321 A+ +R G ++ G V + YG F++I GV GL+H+SE+ + + P V Sbjct: 184 ---ALVERKMNGLEVAQVVVGSVRGIKPYGAFIDIG-GVSGLLHISEISHDHIDT-PHSV 238 Query: 322 VNVGDVVEVMVLDIDEERRRISLGLKQCKANP 353 NV D ++VM++D+D ER RISL KQ + P Sbjct: 239 FNVNDEIKVMIIDLDAERGRISLSTKQLEPEP 270 Score = 64.7 bits (156), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 65/284 (22%), Positives = 126/284 (44%), Gaps = 18/284 (6%) Query: 274 YPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVL 333 + G + G V ++ G ++I + + EM N+ P +V+ + E +L Sbjct: 28 FSPGDIVAGTVFSMESRGALIDIGAKTAAYIPIQEMS-INRVDDPEEVLQPNETREFFIL 86 Query: 334 DIDEERRRISLGLKQCK-ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVH 392 + E +++L +++ + W++ + + V + + G + ++G + G + Sbjct: 87 TDENEDGQLTLSIRRIEYMRAWERVRQLQAEDATVRSNVFATNRGGALVRIEG-LRGFIP 145 Query: 393 LSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQ-LAEDPFNNWVALNKKG 451 S IS A E+ V G+++ L+VD ER R+ L ++ L E N + Sbjct: 146 GSHISAREAKEDLV-----GEDLPLKFLEVDEERNRLVLSHRRALVERKMNGL----EVA 196 Query: 452 AIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRK 511 +V G V + GA +++ GV G L SE S D ++ V +V DE++ +D + Sbjct: 197 QVVVGSVRGIKPYGAFIDIG-GVSGLLHISEISHDHIDTPHSVFNVNDEIKVMIIDLDAE 255 Query: 512 NRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAAK 555 ISLS + E + A + ++ N + MAE F+ + Sbjct: 256 RGRISLSTKQL----EPEPGAMLKDRDLVNEMADEMAEIFRQKR 295 >UniRef50_C4FZ56 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4FZ56_ABIDE Length = 305 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 91/287 (31%), Positives = 153/287 (53%), Gaps = 12/287 (4%) Query: 9 FEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQG---ELEIQVG 65 E+S K + R G +V+G V+ + + V VD G +E +P ++ N + +I VG Sbjct: 17 LEQSFKRL--REGDLVKGPVIGVGETEVTVDLGSYAEGIVPIDELSNDPKFSIKADIAVG 74 Query: 66 DEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN 125 D V+ + + ++G+G+ LLS ++A AW L A E + I VK G L Sbjct: 75 DVVNAMVLSADNGYGQVLLSIKRADNILAWDFLADAKESGQVFNVKITEAVKAGAVTYLK 134 Query: 126 GIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQL 185 GIRAF+P S + + V +T GK + ++I++D+ +V+S ++V+ E + + ++ Sbjct: 135 GIRAFIPASGLALEYVENTEDFVGKHISVRIIEVDEDDKKLVLSAKSVLREEEAKKTEEK 194 Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 + + G V G V+ L +YGAFV L G+ GL+HI+ M+ +R+KHP E+V+ DE VK Sbjct: 195 MSKVAIGTVVTGKVERLENYGAFVRLPDGLSGLVHISQMSERRIKHPKEVVSENDE--VK 252 Query: 245 VLKFDRERTRVSLGLKQLGEDPWV----AIAKRYPEGTKLTGRVTNL 287 V+ D + ++SL + + E V +I Y G T +L Sbjct: 253 VMITDIKDGKLSLSMTKAVESEVVDDTDSIPVEYSTGDSPTTSFADL 299 Score = 58.2 bits (139), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 70/268 (26%), Positives = 116/268 (43%), Gaps = 15/268 (5%) Query: 272 KRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVM 331 KR EG + G V + + V++ EG+V + E+ + + VGDVV M Sbjct: 22 KRLREGDLVKGPVIGVGETEVTVDLGSYAEGIVPIDELS-NDPKFSIKADIAVGDVVNAM 80 Query: 332 VLDIDEERRRISLGLKQC-KANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGL 390 VL D ++ L +K+ W A+ G KI G L G I Sbjct: 81 VLSADNGYGQVLLSIKRADNILAWDFLADAKESGQVFNVKITEAVKAGAVTYLKG-IRAF 139 Query: 391 VHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKK 450 + S ++ E ++ G I+ +++VD + +++ L K + + Sbjct: 140 IPASGLALEYV--ENTEDFV-GKHISVRIIEVDEDDKKLVLSAKSVLREEEAKKTEEKMS 196 Query: 451 ----GAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFT 506 G +VTGKV ++ GA V L DG+ G + S+ S R++ V+S DEV+ T Sbjct: 197 KVAIGTVVTGKVERLENYGAFVRLPDGLSGLVHISQMSERRIKHPKEVVSENDEVKVMIT 256 Query: 507 GVDRKNRAISLSVRAKDEA---DEKDAI 531 D K+ +SLS+ E+ D+ D+I Sbjct: 257 --DIKDGKLSLSMTKAVESEVVDDTDSI 282 >UniRef50_A9WBG5 RNA binding S1 domain protein n=2 Tax=Chloroflexus RepID=A9WBG5_CHLAA Length = 520 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 94/292 (32%), Positives = 148/292 (50%), Gaps = 38/292 (13%) Query: 176 SENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEI 234 S++ + + L++LQ GME++G V ++ YG FVD+G G DGL+HI++M+ +R++ PSE+ Sbjct: 88 SDDQPHKPRRLKDLQPGMELEGKVTSIALYGVFVDIGVGRDGLVHISEMSDRRIETPSEV 147 Query: 235 VNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVA------------------------- 269 V +GD + V V + E R+SL ++ DP A Sbjct: 148 VQIGDTVKVWVKSIEPEARRISLTMR----DPARAETPRRARQPQPQQQQPRRQEVDREK 203 Query: 270 -IAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVV 328 A R G + G +T +G F +I G +GL+HVSE+ + P V VG+ Sbjct: 204 LAALRV--GDVVEGVITGFAPFGAFADIGVGKDGLIHVSEL-AEGRVEKPEDAVKVGERY 260 Query: 329 EVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGID 388 + +L+ID E RISL L++ Q ET G +EG + I FG F+ + G D Sbjct: 261 QFKILEIDGEAARISLSLRRALRTQRMQQLET---GQILEGTVSGIAPFGAFVDIGVGRD 317 Query: 389 GLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDP 440 GLVH+S ++ + + D++ VL VD + +RISL ++ E P Sbjct: 318 GLVHISALAPHRVEKVEDVVKVG-DKVKVKVLGVDQQSKRISLTMRLEEEQP 368 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 93/277 (33%), Positives = 147/277 (53%), Gaps = 43/277 (15%) Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIH-PSKVVNVGDVVEVMVLDI 335 G +L G+VT++ YG FV+I G +GLVH+SEM +++ I PS+VV +GD V+V V I Sbjct: 104 GMELEGKVTSIALYGVFVDIGVGRDGLVHISEM--SDRRIETPSEVVQIGDTVKVWVKSI 161 Query: 336 DEERRRISLGLKQCKANPWQQFAETHNK--------------------------GDRVEG 369 + E RRISL ++ +P + AET + GD VEG Sbjct: 162 EPEARRISLTMR----DPAR--AETPRRARQPQPQQQQPRRQEVDREKLAALRVGDVVEG 215 Query: 370 KIKSITDFGIFIGLDGGIDGLVHLSDISWNVA--GEEAVREYKKGDEIAAVVLQVDAERE 427 I FG F + G DGL+H+S+++ E+AV K G+ +L++D E Sbjct: 216 VITGFAPFGAFADIGVGKDGLIHVSELAEGRVEKPEDAV---KVGERYQFKILEIDGEAA 272 Query: 428 RISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDR 487 RISL +++ + + G I+ G V+ + GA V++ G +G + S + R Sbjct: 273 RISLSLRRALR---TQRMQQLETGQILEGTVSGIAPFGAFVDIGVGRDGLVHISALAPHR 329 Query: 488 VEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDE 524 VE V+ VGD+V+ K GVD++++ ISL++R ++E Sbjct: 330 VEKVEDVVKVGDKVKVKVLGVDQQSKRISLTMRLEEE 366 Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 43/120 (35%), Positives = 74/120 (61%), Gaps = 10/120 (8%) Query: 149 GKELEFKVIKLDQKRNNVVVS-RRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGA 207 G+ +FK++++D + + +S RRA+ R Q ++ L+ G ++G V + +GA Sbjct: 257 GERYQFKILEIDGEAARISLSLRRAL--------RTQRMQQLETGQILEGTVSGIAPFGA 308 Query: 208 FVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDP 266 FVD+G G DGL+HI+ +A RV+ ++V VGD++ VKVL D++ R+SL ++ E P Sbjct: 309 FVDIGVGRDGLVHISALAPHRVEKVEDVVKVGDKVKVKVLGVDQQSKRISLTMRLEEEQP 368 >UniRef50_A9B5U0 RNA binding S1 domain protein n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B5U0_HERA2 Length = 501 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 90/271 (33%), Positives = 144/271 (53%), Gaps = 26/271 (9%) Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 L +L GME+ G V + YG FVD+G G DGL+HI++M+ +R++ P+++V +GD + V+ Sbjct: 99 LADLHAGMELDGKVTSTALYGVFVDIGVGRDGLVHISEMSDQRIESPTDVVQIGDIVKVR 158 Query: 245 VLKFDRERTRVSLGLKQLGEDPWVAIAKRYPE-----------GTKLTGRVTNLTDYGCF 293 V D + R+SL ++ + KR PE G + G V + +G F Sbjct: 159 VKSVDPDARRISLTMRSPRSEGRRRAPKR-PEVNNDKLGELKPGDLVDGTVNGIAPFGVF 217 Query: 294 VEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP 353 V+I G +GLVH+SE+ N+ V VG VL++D +RISL L++ K + Sbjct: 218 VDIGVGKDGLVHISEL-SENRVEKAEDAVTVGQSYTFRVLEVDTGAQRISLSLRRAKED- 275 Query: 354 WQQFAETHNK----------GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGE 403 +Q+ + + G ++GK+ I FG F+ L G DGLVH+S++S Sbjct: 276 FQERPKAPRRREVNLDVIAPGTVLDGKVSGIAPFGAFVDLGVGRDGLVHISELSEGRV-G 334 Query: 404 EAVREYKKGDEIAAVVLQVDAERERISLGVK 434 + K GD + VL+VD + +RISL ++ Sbjct: 335 KVDDVVKVGDPVKVRVLEVDPDSKRISLTMR 365 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 99/290 (34%), Positives = 157/290 (54%), Gaps = 24/290 (8%) Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIH-PSKVVNVGDVVEVMVLDI 335 G +L G+VT+ YG FV+I G +GLVH+SEM +++ I P+ VV +GD+V+V V + Sbjct: 105 GMELDGKVTSTALYGVFVDIGVGRDGLVHISEM--SDQRIESPTDVVQIGDIVKVRVKSV 162 Query: 336 DEERRRISLGLKQCKANPWQQFA---ETHN-------KGDRVEGKIKSITDFGIFIGLDG 385 D + RRISL ++ ++ ++ E +N GD V+G + I FG+F+ + Sbjct: 163 DPDARRISLTMRSPRSEGRRRAPKRPEVNNDKLGELKPGDLVDGTVNGIAPFGVFVDIGV 222 Query: 386 GIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAED------ 439 G DGLVH+S++S N E+A G VL+VD +RISL +++ ED Sbjct: 223 GKDGLVHISELSENRV-EKAEDAVTVGQSYTFRVLEVDTGAQRISLSLRRAKEDFQERPK 281 Query: 440 -PFNNWVALN--KKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLS 496 P V L+ G ++ GKV+ + GA V+L G +G + SE S RV V+ Sbjct: 282 APRRREVNLDVIAPGTVLDGKVSGIAPFGAFVDLGVGRDGLVHISELSEGRVGKVDDVVK 341 Query: 497 VGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNA 546 VGD V+ + VD ++ ISL++R +EA + + + D +++N A Sbjct: 342 VGDPVKVRVLEVDPDSKRISLTMRV-EEAPTTPISTSGSSRLDRDWTNPA 390 Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 57/183 (31%), Positives = 95/183 (51%), Gaps = 28/183 (15%) Query: 114 GKVKGGFTVE--LNGIRAFLPGSLVDVRPVRDTL-HLE----------------GKELEF 154 G++K G V+ +NGI F G VD+ +D L H+ G+ F Sbjct: 196 GELKPGDLVDGTVNGIAPF--GVFVDIGVGKDGLVHISELSENRVEKAEDAVTVGQSYTF 253 Query: 155 KVIKLDQKRNNVVVS-RRA---VIESENSAERDQL-LENLQEGMEVKGIVKNLTDYGAFV 209 +V+++D + +S RRA E + R ++ L+ + G + G V + +GAFV Sbjct: 254 RVLEVDTGAQRISLSLRRAKEDFQERPKAPRRREVNLDVIAPGTVLDGKVSGIAPFGAFV 313 Query: 210 DLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWV 268 DLG G DGL+HI++++ RV ++V VGD + V+VL+ D + R+SL ++ + E P Sbjct: 314 DLGVGRDGLVHISELSEGRVGKVDDVVKVGDPVKVRVLEVDPDSKRISLTMR-VEEAPTT 372 Query: 269 AIA 271 I+ Sbjct: 373 PIS 375 >UniRef50_D1A3N7 RNA binding S1 domain protein n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1A3N7_THECD Length = 162 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 63/162 (38%), Positives = 104/162 (64%), Gaps = 6/162 (3%) Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKV 245 L++ + GM V G V++L +GAFVDLGGV+GLL +++W+ +++PS++++VG E+TVK+ Sbjct: 7 LKSYRAGMIVTGRVRSLERFGAFVDLGGVEGLLKTHNISWRPIEYPSDVLSVGKEVTVKI 66 Query: 246 LKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVH 305 L D +R ++SL LK L DP + + ++ G+ +TG+V + +G FV+IEEG GL+ Sbjct: 67 LDVDLQRGQISLSLKDLQPDPMIPLKEKV--GSVVTGKVVKIVPFGIFVQIEEGQLGLLM 124 Query: 306 VSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLK 347 SE P +G+ ++V + D+D + RRI L L Sbjct: 125 NSEFTGPGAPPRP----EIGEEIQVRIADVDLDSRRIRLSLP 162 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 58/163 (35%), Positives = 86/163 (52%), Gaps = 8/163 (4%) Query: 272 KRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVM 331 K Y G +TGRV +L +G FV++ GVEGL+ + W +PS V++VG V V Sbjct: 8 KSYRAGMIVTGRVRSLERFGAFVDLG-GVEGLLKTHNISWRPIE-YPSDVLSVGKEVTVK 65 Query: 332 VLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLV 391 +LD+D +R +ISL LK + +P E G V GK+ I FGIF+ ++ G GL+ Sbjct: 66 ILDVDLQRGQISLSLKDLQPDPMIPLKE--KVGSVVTGKVVKIVPFGIFVQIEEGQLGLL 123 Query: 392 HLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVK 434 S+ + G A + G+EI + VD + RI L + Sbjct: 124 MNSEFT----GPGAPPRPEIGEEIQVRIADVDLDSRRIRLSLP 162 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 53/162 (32%), Positives = 86/162 (53%), Gaps = 9/162 (5%) Query: 359 ETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAV 418 +++ G V G+++S+ FG F+ L GG++GL+ +ISW E G E+ Sbjct: 8 KSYRAGMIVTGRVRSLERFGAFVDL-GGVEGLLKTHNISWRPI-EYPSDVLSVGKEVTVK 65 Query: 419 VLQVDAERERISLGVKQLAEDPFNNWVALNKK-GAIVTGKVTAVDAKGATVELADGVEGY 477 +L VD +R +ISL +K L DP + L +K G++VTGKV + G V++ +G G Sbjct: 66 ILDVDLQRGQISLSLKDLQPDPM---IPLKEKVGSVVTGKVVKIVPFGIFVQIEEGQLGL 122 Query: 478 LRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSV 519 L SE + A +G+E++ + VD +R I LS+ Sbjct: 123 LMNSEFTG---PGAPPRPEIGEEIQVRIADVDLDSRRIRLSL 161 Score = 48.5 bits (114), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 1/72 (1%) Query: 449 KKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGV 508 + G IVTG+V +++ GA V+L GVEG L+ S +E + VLSVG EV K V Sbjct: 11 RAGMIVTGRVRSLERFGAFVDLG-GVEGLLKTHNISWRPIEYPSDVLSVGKEVTVKILDV 69 Query: 509 DRKNRAISLSVR 520 D + ISLS++ Sbjct: 70 DLQRGQISLSLK 81 >UniRef50_A9WG06 RNA binding S1 domain protein n=3 Tax=Chloroflexus RepID=A9WG06_CHLAA Length = 554 Score = 121 bits (303), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 63/197 (31%), Positives = 109/197 (55%), Gaps = 10/197 (5%) Query: 164 NNVVVSRRAVIESENSA--ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHIT 221 NN +V + E+ N +R Q L L G V G V + YGA ++LGG++G +H+ Sbjct: 357 NNGIVPETVLSETYNERIRQRRQRLAGLTIGQIVNGSVLRVLRYGAVIELGGIEGFVHVG 416 Query: 222 DMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLT 281 ++ W+ + ++ G EI + D +R R +L ++++ DPW+A+A++ G ++ Sbjct: 417 EIDWRWIGDARHALHPGQEIQAVITGIDEQRLRANLSMRRVHPDPWLAVAQQLNAGMQVQ 476 Query: 282 GRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRR 341 G V +TD+G F+E+ GV+GL H+S++ + + + ++G V+ +L ID ERRR Sbjct: 477 GTVAGITDFGIFIELLPGVQGLAHISQIPPDQQPL--KQAFSLGRRVQTTILSIDHERRR 534 Query: 342 ISLGL------KQCKAN 352 I+L L K C N Sbjct: 535 IALSLYTKLQQKPCSVN 551 Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 56/173 (32%), Positives = 94/173 (54%), Gaps = 17/173 (9%) Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDW-----TNKNIHPSKVVNVGDVVEVM 331 G + G V + YG +E+ G+EG VHV E+DW +HP G ++ + Sbjct: 387 GQIVNGSVLRVLRYGAVIELG-GIEGFVHVGEIDWRWIGDARHALHP------GQEIQAV 439 Query: 332 VLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLV 391 + IDE+R R +L +++ +PW A+ N G +V+G + ITDFGIFI L G+ GL Sbjct: 440 ITGIDEQRLRANLSMRRVHPDPWLAVAQQLNAGMQVQGTVAGITDFGIFIELLPGVQGLA 499 Query: 392 HLSDISWNVAGEEAVRE-YKKGDEIAAVVLQVDAERERISLGV-KQLAEDPFN 442 H+S I + ++ +++ + G + +L +D ER RI+L + +L + P + Sbjct: 500 HISQIPPD---QQPLKQAFSLGRRVQTTILSIDHERRRIALSLYTKLQQKPCS 549 Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 9/162 (5%) Query: 364 GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVD 423 G V G + + +G I L GGI+G VH+ +I W G+ A G EI AV+ +D Sbjct: 387 GQIVNGSVLRVLRYGAVIEL-GGIEGFVHVGEIDWRWIGD-ARHALHPGQEIQAVITGID 444 Query: 424 AERERISLGVKQLAEDPFNNWVALNKK---GAIVTGKVTAVDAKGATVELADGVEGYLRA 480 +R R +L ++++ DP W+A+ ++ G V G V + G +EL GV+G Sbjct: 445 EQRLRANLSMRRVHPDP---WLAVAQQLNAGMQVQGTVAGITDFGIFIELLPGVQGLAHI 501 Query: 481 SEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAK 522 S+ D+ + S+G V+ +D + R I+LS+ K Sbjct: 502 SQIPPDQ-QPLKQAFSLGRRVQTTILSIDHERRRIALSLYTK 542 >UniRef50_B0MBX8 Putative uncharacterized protein n=7 Tax=Clostridiales RepID=B0MBX8_9FIRM Length = 309 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 88/273 (32%), Positives = 148/273 (54%), Gaps = 11/273 (4%) Query: 1 MTESFAQLFEESLKEIETR-----PGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK- 54 M E + E+ E+E G IV G V+++ + ++D ++ + A ++ Sbjct: 7 MAEEMKETMEQYENELEASFRKMDEGDIVEGDVLSVSDEEAVIDLKYYAQGILKASEYSD 66 Query: 55 --NAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVI 112 N + GD V + +V+DG G +LS+ +A + AW L+K E+ ++ + Sbjct: 67 DPNVTLTEALNEGDRVKAKVISVDDGEGNIVLSKREANQVLAWDRLQKLMEEETVLSLTV 126 Query: 113 NGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRA 172 G V GG V + GIR F+P S + + V D KE+E K+I +D+ RN +V+S + Sbjct: 127 GGVVNGGVIVYVEGIRGFIPASQLSLNYVEDLNTWLKKEVEAKIITVDESRNKLVLSAKE 186 Query: 173 VIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHP 231 V +++ E + + ++ GM ++G V+N+ YGAFVDLG G+ GL+HI+ + KR+K P Sbjct: 187 VEKAKAQEELNHKMAMMRPGMVLEGTVENIMPYGAFVDLGDGLSGLIHISQFSEKRIKSP 246 Query: 232 SEIVNVGDEITVKVLKFDRERTRVSLGLKQLGE 264 E+V G ++ VKVLK ++SL +K L E Sbjct: 247 KEMVEEGQKVKVKVLKI--ADNKISLSMKALEE 277 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 62/226 (27%), Positives = 112/226 (49%), Gaps = 30/226 (13%) Query: 148 EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLL--ENLQEGMEVKGIVKNLTDY 205 EG ++ KVI +D N+V+S+R E +Q+L + LQ+ ME + ++ +LT Sbjct: 78 EGDRVKAKVISVDDGEGNIVLSKR---------EANQVLAWDRLQKLMEEETVL-SLTVG 127 Query: 206 GAFVDLG-----GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLK 260 G G+ G + + ++ V+ + + E+ K++ D R ++ L K Sbjct: 128 GVVNGGVIVYVEGIRGFIPASQLSLNYVEDLNTWLK--KEVEAKIITVDESRNKLVLSAK 185 Query: 261 QL-----GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKN 315 ++ E+ +A P G L G V N+ YG FV++ +G+ GL+H+S+ ++ K Sbjct: 186 EVEKAKAQEELNHKMAMMRP-GMVLEGTVENIMPYGAFVDLGDGLSGLIHISQ--FSEKR 242 Query: 316 I-HPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAET 360 I P ++V G V+V VL I + +ISL +K + + + ET Sbjct: 243 IKSPKEMVEEGQKVKVKVLKIAD--NKISLSMKALEESREAEKVET 286 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 66/269 (24%), Positives = 118/269 (43%), Gaps = 39/269 (14%) Query: 189 LQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLK 247 + EG V+G V +++D A +DL G+L ++ + +E +N GD + KV+ Sbjct: 29 MDEGDIVEGDVLSVSDEEAVIDLKYYAQGILKASEYSDDPNVTLTEALNEGDRVKAKVIS 88 Query: 248 FDRERTRVSLGLKQLGE-DPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHV 306 D + L ++ + W + K E T L+ G + EG+ G + Sbjct: 89 VDDGEGNIVLSKREANQVLAWDRLQKLMEEETVLS-LTVGGVVNGGVIVYVEGIRGFIPA 147 Query: 307 SEMD---------WTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQF 357 S++ W K VE ++ +DE R ++ L K+ + Q+ Sbjct: 148 SQLSLNYVEDLNTWLKKE------------VEAKIITVDESRNKLVLSAKEVEKAKAQE- 194 Query: 358 AETHNK------GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWN--VAGEEAVREY 409 E ++K G +EG +++I +G F+ L G+ GL+H+S S + +E V E Sbjct: 195 -ELNHKMAMMRPGMVLEGTVENIMPYGAFVDLGDGLSGLIHISQFSEKRIKSPKEMVEE- 252 Query: 410 KKGDEIAAVVLQVDAERERISLGVKQLAE 438 G ++ VL++ +ISL +K L E Sbjct: 253 --GQKVKVKVLKI--ADNKISLSMKALEE 277 >UniRef50_A4XKP1 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XKP1_CALS8 Length = 662 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 96/354 (27%), Positives = 182/354 (51%), Gaps = 17/354 (4%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAI-PAEQFKNAQGEL 60 + FA+L ++S EI + G IV+G ++ +++D +LVD G K+E I E FKNA L Sbjct: 287 NQDFAKLLDKSFAEI--KRGEIVKGKIIKVEQDYLLVDIGYKAEGIIYKNEIFKNANVNL 344 Query: 61 EIQVGDEVDVALDAV----EDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKV 116 + + +E ++ ++AV D G +LS+ KA + L +E + V+ Sbjct: 345 K-NIFNENEI-IEAVVIKESDEEGNVVLSKLKADSIYGFNELMAKFESKTPIKIVVKQIR 402 Query: 117 KGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIES 176 + E GI F+P S V ++ GK E +++ +D + SR+ ++ Sbjct: 403 ERSIVGEFRGINVFVPISQW-AEEVSSSII--GKVFEVEIVDIDTDKKIAFGSRKFLLRQ 459 Query: 177 ENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAW-KRVKHPSEIV 235 + Q +E+L + G++ + G V+ G+ G + +++++ KR++ ++ Sbjct: 460 AQEKKIQQAIESLDFNKDYDGVIAEIRQKGIVVNFEGLRGFVPASEISYSKRIEDVKKLF 519 Query: 236 NVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVE 295 VG+++ V+V+ D+++ ++ L +K+ ED W+ K G + VT + +G V Sbjct: 520 KVGEQVKVRVIDIDKQKKQIYLSIKKTQEDEWIKKVKNLYLGMLVDVEVTKVLSFGLVVW 579 Query: 296 IEEG-VEGLVHVSEMDW-TNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLK 347 I + ++G VHVS + N+ +H + VGD ++ +++IDE+RRRI L LK Sbjct: 580 ILDCELDGFVHVSNIPLGYNQRLHS--LYKVGDKIKAKIIEIDEQRRRIGLSLK 631 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 73/298 (24%), Positives = 148/298 (49%), Gaps = 17/298 (5%) Query: 148 EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGA 207 E + +E VIK + NVV+S+ +++++ ++L+ + +K +VK + + Sbjct: 350 ENEIIEAVVIKESDEEGNVVLSK---LKADSIYGFNELMAKFESKTPIKIVVKQIRERSI 406 Query: 208 FVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLG-----LKQL 262 + G++ + I+ A + S I+ G V+++ D ++ +++ G L+Q Sbjct: 407 VGEFRGINVFVPISQWAEEV---SSSII--GKVFEVEIVDIDTDK-KIAFGSRKFLLRQA 460 Query: 263 GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVV 322 E + G + + G V E G+ G V SE+ ++ + K+ Sbjct: 461 QEKKIQQAIESLDFNKDYDGVIAEIRQKGIVVNFE-GLRGFVPASEISYSKRIEDVKKLF 519 Query: 323 NVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIG 382 VG+ V+V V+DID+++++I L +K+ + + W + + G V+ ++ + FG+ + Sbjct: 520 KVGEQVKVRVIDIDKQKKQIYLSIKKTQEDEWIKKVKNLYLGMLVDVEVTKVLSFGLVVW 579 Query: 383 -LDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAED 439 LD +DG VH+S+I + YK GD+I A ++++D +R RI L +K L E+ Sbjct: 580 ILDCELDGFVHVSNIPLG-YNQRLHSLYKVGDKIKAKIIEIDEQRRRIGLSLKDLYEE 636 Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 60/213 (28%), Positives = 111/213 (52%), Gaps = 8/213 (3%) Query: 324 VGDVVEVMVLDIDEERRRISLG-----LKQCKANPWQQFAETHNKGDRVEGKIKSITDFG 378 +G V EV ++DID +++ I+ G L+Q + QQ E+ + +G I I G Sbjct: 431 IGKVFEVEIVDIDTDKK-IAFGSRKFLLRQAQEKKIQQAIESLDFNKDYDGVIAEIRQKG 489 Query: 379 IFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAE 438 I + +G + G V S+IS++ E+ + +K G+++ V+ +D ++++I L +K+ E Sbjct: 490 IVVNFEG-LRGFVPASEISYSKRIEDVKKLFKVGEQVKVRVIDIDKQKKQIYLSIKKTQE 548 Query: 439 DPFNNWVALNKKGAIVTGKVTAVDAKGATVELADG-VEGYLRASEASRDRVEDATLVLSV 497 D + V G +V +VT V + G V + D ++G++ S + + V Sbjct: 549 DEWIKKVKNLYLGMLVDVEVTKVLSFGLVVWILDCELDGFVHVSNIPLGYNQRLHSLYKV 608 Query: 498 GDEVEAKFTGVDRKNRAISLSVRAKDEADEKDA 530 GD+++AK +D + R I LS++ E +EK A Sbjct: 609 GDKIKAKIIEIDEQRRRIGLSLKDLYEEEEKIA 641 >UniRef50_B4U6I5 RNA binding S1 domain protein n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U6I5_HYDS0 Length = 525 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 141/546 (25%), Positives = 255/546 (46%), Gaps = 56/546 (10%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL 60 M F +L + ++ T GS+V+G VV I V +D G K E I + G++ Sbjct: 1 MVTEFEELLKAQKEQFST--GSVVKGSVVKITDSNVYLDIGYKIEGVIRRYEV----GDV 54 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 EI G E++ + + G +LS + K + + +KA E + ++ K K GF Sbjct: 55 EI--GQEIEAVIIKLR-GIENPILSTKPLKSSKGFSIAKKALEQKTPIDVIVESKGKPGF 111 Query: 121 TVELNGIRAFLPGSLVDVRPVRDTLHLE-GKELEFKVIK--LDQKRNNVVVSRRAVIESE 177 V+L IRA +P H+ G +++ V K + + V VS + E Sbjct: 112 FVQLEDIRALMPFG-------EAPRHVNIGDKIKVLVTKATYENGKPMVNVSYKEYENIE 164 Query: 178 NSAERDQLLENLQEGMEVKG-IVKNLTDYGAFVDLG-GVDGLL-HITDMAWKRVKHPSEI 234 ++ + + +L+ G ++G ++K + G V L GV G + H +K Sbjct: 165 RHQKQLEFINSLEVGSTIEGKVIKVDPEKGITVLLKEGVRGFVPHYEIPKGTNIKE---- 220 Query: 235 VNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTD-YGCF 293 D + V+V+K ++ + L L++ ++ W + + EG K G+V+ G F Sbjct: 221 ---NDTLEVRVIKKAKKGDFLILSLRKPKKNIWETLELK--EGDKTEGKVSFYRKGKGLF 275 Query: 294 VEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP 353 VE++EG+ LV M KNI +K++ G ++++V ID+++++I + + + NP Sbjct: 276 VELQEGITALVPEESM----KNIG-NKLLKSGTKLKLVVTRIDKDKKQIDVNIVPSEENP 330 Query: 354 WQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISW--NVAGEEAVREYKK 411 F +++ V+GK+K++ FI L ++G+V D+SW N EE + Sbjct: 331 AADFIKSNPPNTIVKGKVKTVHPNIAFIELGPNVEGIVKKQDMSWLKNARSEELLTP--- 387 Query: 412 GDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELA 471 G+E +VL +D ++ + LG+KQL ++P++ K G V V V G + L Sbjct: 388 GEEKEFMVLGLDGKK--VKLGLKQLTQNPWSVIPERYKPGQQVELAVKEVRPFGTFLGLP 445 Query: 472 DGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSV------RAKDEA 525 +G++G L SE ++ L G + K V+ K I+ S+ + K++ Sbjct: 446 EGIDGLLPISEIPKNT------NLEPGQNITVKVLEVNPKEEKITFSMIQETKKQQKEQG 499 Query: 526 DEKDAI 531 D+K+ I Sbjct: 500 DQKEFI 505 >UniRef50_A4RTM3 Plastid ribosomal protein S1, imported to chloroplast, small ribosomal subunit n=2 Tax=Ostreococcus RepID=A4RTM3_OSTLU Length = 339 Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 80/263 (30%), Positives = 140/263 (53%), Gaps = 17/263 (6%) Query: 5 FAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQ-----FKNAQGE 59 FA L ++ + + G ++ G + A D V+ G KSE+ P + +NA Sbjct: 47 FASLLDKY--QYNYKVGDVISGKIKACDAKGAWVEIGAKSEALCPTSEASLGNVRNAAAV 104 Query: 60 LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGG 119 +I + ++ D ++G G LS + + +AW +A D +TG + +GG Sbjct: 105 FDIDCDYDFEIIQD--DNGEGCMTLSVRRMELAKAWDRCREAQADDAALTGDVLSVNRGG 162 Query: 120 FTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 VE+ +R F+P S + VR + + L G++L FK I++D+++N +V+S R + ++ Sbjct: 163 LLVEVEKLRGFVPQSHIGVRTL-NREELIGQQLPFKFIEVDEEKNRLVLSHRLATDMVSA 221 Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGD 239 E L+ G V+G+V+ + YGAFVD+GG GLLHI+ ++ +R+ +++ GD Sbjct: 222 -------EGLEVGDVVEGMVQAVKPYGAFVDVGGQSGLLHISQISHERIVAVENVLSPGD 274 Query: 240 EITVKVLKFDRERTRVSLGLKQL 262 I V V+ D E+ R+SL K+L Sbjct: 275 RIKVLVMSKDAEKGRLSLSTKKL 297 Score = 64.7 bits (156), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 67/279 (24%), Positives = 133/279 (47%), Gaps = 16/279 (5%) Query: 165 NVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDM 223 +V V + +E ++ D+ N + G + G +K GA+V++G + L ++ Sbjct: 34 DVDVGKTGAAYTEFASLLDKYQYNYKVGDVISGKIKACDAKGAWVEIGAKSEALCPTSEA 93 Query: 224 AWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLG-EDPWVAIAKRYPEGTKLTG 282 + V++ + + ++ + ++++ D ++L ++++ W + + LTG Sbjct: 94 SLGNVRNAAAVFDIDCDYDFEIIQDDNGEGCMTLSVRRMELAKAWDRCREAQADDAALTG 153 Query: 283 RVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRI 342 V ++ G VE+E+ + G V S + N +G + +++DEE+ R+ Sbjct: 154 DVLSVNRGGLLVEVEK-LRGFVPQSHIGVRTLNREEL----IGQQLPFKFIEVDEEKNRL 208 Query: 343 SLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWN--V 400 L + AE GD VEG ++++ +G F+ + GG GL+H+S IS V Sbjct: 209 VLSHRLATD---MVSAEGLEVGDVVEGMVQAVKPYGAFVDV-GGQSGLLHISQISHERIV 264 Query: 401 AGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAED 439 A E + GD I +V+ DAE+ R+SL K+L ++ Sbjct: 265 AVENVL---SPGDRIKVLVMSKDAEKGRLSLSTKKLEQN 300 Score = 43.9 bits (102), Expect = 0.016, Method: Compositional matrix adjust. Identities = 60/248 (24%), Positives = 107/248 (43%), Gaps = 11/248 (4%) Query: 274 YPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVL 333 Y G ++G++ G +VEI E L SE N + + V ++ + ++ Sbjct: 58 YKVGDVISGKIKACDAKGAWVEIGAKSEALCPTSEASLGNVR-NAAAVFDIDCDYDFEII 116 Query: 334 DIDEERRRISLGLKQCK-ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVH 392 D ++L +++ + A W + E + G + S+ G+ + ++ + G V Sbjct: 117 QDDNGEGCMTLSVRRMELAKAWDRCREAQADDAALTGDVLSVNRGGLLVEVEK-LRGFVP 175 Query: 393 LSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGA 452 S I RE G ++ ++VD E+ R+ L +LA D + + G Sbjct: 176 QSHIGVRTLN----REELIGQQLPFKFIEVDEEKNRLVLS-HRLATDMVSAEGL--EVGD 228 Query: 453 IVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKN 512 +V G V AV GA V++ G G L S+ S +R+ VLS GD ++ D + Sbjct: 229 VVEGMVQAVKPYGAFVDVG-GQSGLLHISQISHERIVAVENVLSPGDRIKVLVMSKDAEK 287 Query: 513 RAISLSVR 520 +SLS + Sbjct: 288 GRLSLSTK 295 >UniRef50_C5RED5 RNA binding S1 domain protein n=1 Tax=Clostridium cellulovorans 743B RepID=C5RED5_CLOCL Length = 308 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 84/265 (31%), Positives = 140/265 (52%), Gaps = 10/265 (3%) Query: 5 FAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQ--FKNAQGELE- 61 F + S+K I G +V G VV++ ++ VLV G + IP E+ F ++ E Sbjct: 10 FMDQIDNSMKRI--VKGQMVEGEVVSVTEEDVLVSIGHMKDGIIPKEKATFDMSKSLKEQ 67 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 +GD + ++ +DG G+ LLS+ K R +W L++ + E + VKGG T Sbjct: 68 FNLGDIIKAYVEVEDDGEGKILLSKVKLDRESSWDELQRLHNTQEIFEVTVKEAVKGGAT 127 Query: 122 VELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 EL G+RAF+P S + + V D K L+ K+I+L++ V++S + V E S + Sbjct: 128 TELYGVRAFIPASQLSMSYVEDISAFVNKVLKVKLIELNKDNRRVILSAKEVERDELSKK 187 Query: 182 RDQLLENLQEGMEVKGIVKN----LTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVN 236 D L E++ + V IV+ L +GA V L GV+GL+H + ++ RV +P + + Sbjct: 188 MDNLWESIDDKYRVGDIVETKVVKLLKFGAIVKLEEGVEGLVHNSQISDDRVMNPGDYLK 247 Query: 237 VGDEITVKVLKFDRERTRVSLGLKQ 261 G +I VK+L D+ + ++SL K+ Sbjct: 248 EGQDIKVKILTIDKVQKKISLSYKE 272 Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 57/210 (27%), Positives = 109/210 (51%), Gaps = 17/210 (8%) Query: 167 VVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWK 226 ++ + ++ E+S + Q L N QE EV VK GA +L GV + + ++ Sbjct: 88 ILLSKVKLDRESSWDELQRLHNTQEIFEV--TVKEAVKGGATTELYGVRAFIPASQLSMS 145 Query: 227 RVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDP--------WVAIAKRYPEGT 278 V+ S VN + VK+++ +++ RV L K++ D W +I +Y G Sbjct: 146 YVEDISAFVN--KVLKVKLIELNKDNRRVILSAKEVERDELSKKMDNLWESIDDKYRVGD 203 Query: 279 KLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEE 338 + +V L +G V++EEGVEGLVH S++ ++ ++P + G ++V +L ID+ Sbjct: 204 IVETKVVKLLKFGAIVKLEEGVEGLVHNSQIS-DDRVMNPGDYLKEGQDIKVKILTIDKV 262 Query: 339 RRRISLGLKQC----KANPWQQFAETHNKG 364 +++ISL K+ ++ ++++A+ + G Sbjct: 263 QKKISLSYKEAVAKEQSTEFRKYAKNEDFG 292 Score = 58.2 bits (139), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 73/304 (24%), Positives = 133/304 (43%), Gaps = 43/304 (14%) Query: 272 KRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDW-TNKNIHPSKVVNVGDVVEV 330 KR +G + G V ++T+ V I +G++ + + +K++ N+GD+++ Sbjct: 19 KRIVKGQMVEGEVVSVTEEDVLVSIGHMKDGIIPKEKATFDMSKSLKEQ--FNLGDIIKA 76 Query: 331 MVLDIDEERRRISLG-LKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDG 389 V D+ +I L +K + + W + HN + E +K G L G+ Sbjct: 77 YVEVEDDGEGKILLSKVKLDRESSWDELQRLHNTQEIFEVTVKEAVKGGATTEL-YGVRA 135 Query: 390 LVHLSDISWNVAGEEAVREYKKGDEIAAVV--------LQVDAERERISLGVKQLAEDPF 441 + S +S + ++I+A V ++++ + R+ L K++ D Sbjct: 136 FIPASQLSMSYV-----------EDISAFVNKVLKVKLIELNKDNRRVILSAKEVERDEL 184 Query: 442 -----NNWVALNKK---GAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATL 493 N W +++ K G IV KV + GA V+L +GVEG + S+ S DRV + Sbjct: 185 SKKMDNLWESIDDKYRVGDIVETKVVKLLKFGAIVKLEEGVEGLVHNSQISDDRVMNPGD 244 Query: 494 VLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKA 553 L G +++ K +D+ + ISLS K+A+A K++ F A E F Sbjct: 245 YLKEGQDIKVKILTIDKVQKKISLSY--------KEAVA---KEQSTEFRKYAKNEDFGT 293 Query: 554 AKGE 557 G+ Sbjct: 294 TLGD 297 >UniRef50_C1EEV9 Predicted protein n=2 Tax=Micromonas RepID=C1EEV9_9CHLO Length = 387 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 82/252 (32%), Positives = 127/252 (50%), Gaps = 17/252 (6%) Query: 21 GSIVRGVVVAIDKDVVLVDAGLKSESAIPAE-----QFKNAQGELEIQVGDEVDVALDAV 75 G V G V D VD G K+ + P Q +NA +I G+E + + Sbjct: 87 GDRVTGKVFHCDAKGAWVDIGAKAAALCPGSEASLAQARNAAAVFDI--GEEYEFEIIRD 144 Query: 76 EDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSL 135 +DG G LS K + AW + + E V V+ +GG VE+ +R F+P S Sbjct: 145 DDGDGSLTLSVRKIQLEAAWNRCREMQANDEAVNSVVLSVNRGGLLVEVEHLRGFVPQSH 204 Query: 136 VDVR-PVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGME 194 + +R P RD L G+ + K +++D+++N +V+S R + + E L G Sbjct: 205 IAMRVPNRD--ELIGQSVPVKFLEVDEEKNRLVMSNRLATDVVSG-------EGLGVGDV 255 Query: 195 VKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTR 254 KG+V+ + YGAFVD+GGV GLLHI+ ++ R+ ++ GDE+ V +L D ER+R Sbjct: 256 CKGVVQAVKPYGAFVDVGGVSGLLHISQISHDRIVAVENVLAPGDELKVLILSKDAERSR 315 Query: 255 VSLGLKQLGEDP 266 +SL K+L P Sbjct: 316 LSLSTKKLEPSP 327 Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 72/291 (24%), Positives = 138/291 (47%), Gaps = 30/291 (10%) Query: 168 VSRRAVIE---SENSAERDQLLENLQE-----------GMEVKGIVKNLTDYGAFVDLGG 213 V+ RAV+ +E+SA+ +L + + G V G V + GA+VD+G Sbjct: 49 VATRAVVTETTAESSADSAELYKEFERLLVDYQFSYKVGDRVTGKVFHCDAKGAWVDIGA 108 Query: 214 -VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLG-EDPWVAIA 271 L ++ + + ++ + + ++G+E ++++ D ++L ++++ E W Sbjct: 109 KAAALCPGSEASLAQARNAAAVFDIGEEYEFEIIRDDDGDGSLTLSVRKIQLEAAWNRCR 168 Query: 272 KRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVM 331 + + V ++ G VE+E + G V S + P++ +G V V Sbjct: 169 EMQANDEAVNSVVLSVNRGGLLVEVEH-LRGFVPQSHIAMRV----PNRDELIGQSVPVK 223 Query: 332 VLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLV 391 L++DEE+ R+ + + E GD +G ++++ +G F+ + GG+ GL+ Sbjct: 224 FLEVDEEKNRLVMSNRLATD---VVSGEGLGVGDVCKGVVQAVKPYGAFVDV-GGVSGLL 279 Query: 392 HLSDISWN--VAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDP 440 H+S IS + VA E + GDE+ ++L DAER R+SL K+L P Sbjct: 280 HISQISHDRIVAVENVL---APGDELKVLILSKDAERSRLSLSTKKLEPSP 327 Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 62/248 (25%), Positives = 111/248 (44%), Gaps = 11/248 (4%) Query: 274 YPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVL 333 Y G ++TG+V + G +V+I L SE + + V ++G+ E ++ Sbjct: 84 YKVGDRVTGKVFHCDAKGAWVDIGAKAAALCPGSEASLAQAR-NAAAVFDIGEEYEFEII 142 Query: 334 DIDEERRRISLGLKQCKANP-WQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVH 392 D+ ++L +++ + W + E + V + S+ G+ + ++ + G V Sbjct: 143 RDDDGDGSLTLSVRKIQLEAAWNRCREMQANDEAVNSVVLSVNRGGLLVEVEH-LRGFVP 201 Query: 393 LSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGA 452 S I+ V R+ G + L+VD E+ R+ + +LA D + L G Sbjct: 202 QSHIAMRVPN----RDELIGQSVPVKFLEVDEEKNRLVMS-NRLATDVVSGE-GLGV-GD 254 Query: 453 IVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKN 512 + G V AV GA V++ GV G L S+ S DR+ VL+ GDE++ D + Sbjct: 255 VCKGVVQAVKPYGAFVDVG-GVSGLLHISQISHDRIVAVENVLAPGDELKVLILSKDAER 313 Query: 513 RAISLSVR 520 +SLS + Sbjct: 314 SRLSLSTK 321 >UniRef50_B8C8K9 RS1, ribosomal protein 1 (Fragment) n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8C8K9_THAPS Length = 287 Score = 111 bits (277), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 79/250 (31%), Positives = 130/250 (52%), Gaps = 16/250 (6%) Query: 23 IVRGVVVAIDKDVVLVDAGLKSESAIPAEQ---FKNAQGELE--IQVGDEVDVALDAVED 77 IV+G VV DK +VD G K+ + +P ++ F+ +E I + +E + + ED Sbjct: 24 IVKGTVVQYDKGGCIVDIGAKASAYLPLQEATLFQEQGQSIEGIIDIDEERQFEIISEED 83 Query: 78 GFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVD 137 G+ L+S + + EAW + + E +GG + G+RAFLPGS + Sbjct: 84 ENGQLLVSIRRIQYREAWDKVIAKQDSDEVFEAECVSVNRGGAIFLVEGLRAFLPGSHLT 143 Query: 138 VRPVRDTLHLEGKELEFKVIKLDQKRNNVVVS-RRAVIESENSAERDQLLENLQEGMEVK 196 R D L G+ L K ++++Q+ N +VVS RRAV+E + + L G + Sbjct: 144 GRLPDD--DLVGQTLPLKFLEVNQEDNKLVVSNRRAVVEEQ--------MAELSRGDVID 193 Query: 197 GIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVS 256 GIVK L YGAFV++GG+ GLLHI+ ++ R+ +++ G +I ++ D+ R++ Sbjct: 194 GIVKALKPYGAFVEVGGMSGLLHISQISMDRITDLEQVLQPGQKIKCMIIDHDKVNGRIA 253 Query: 257 LGLKQLGEDP 266 L K L +P Sbjct: 254 LSTKTLEPEP 263 Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust. Identities = 33/118 (27%), Positives = 67/118 (56%), Gaps = 7/118 (5%) Query: 324 VGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGL 383 VG + + L++++E ++ + + +A +Q AE ++GD ++G +K++ +G F+ + Sbjct: 152 VGQTLPLKFLEVNQEDNKLVVSNR--RAVVEEQMAEL-SRGDVIDGIVKALKPYGAFVEV 208 Query: 384 DGGIDGLVHLSDISWN-VAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDP 440 GG+ GL+H+S IS + + E V + G +I +++ D RI+L K L +P Sbjct: 209 -GGMSGLLHISQISMDRITDLEQV--LQPGQKIKCMIIDHDKVNGRIALSTKTLEPEP 263 >UniRef50_D1X7G9 RNA binding S1 domain protein n=1 Tax=Streptomyces sp. ACT-1 RepID=D1X7G9_9ACTO Length = 278 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 69/209 (33%), Positives = 116/209 (55%), Gaps = 12/209 (5%) Query: 149 GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAF 208 G+ L F+VI +D ++ V S A E+ R LL L+ G +G V+++ ++G F Sbjct: 72 GQRLTFEVIAVDWQQECVWASTSAC---EDPDLRVFLL-GLRRGATHRGQVQSVHNFGVF 127 Query: 209 VDLGG-----VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLG 263 V+L G G + +++W+R+ HP++ V G+ + +++ D R +V L LK L Sbjct: 128 VNLDGEPDNQCTGFIRGPELSWRRIGHPADAVTAGERVVGEIIGVDTRRGQVQLSLKALQ 187 Query: 264 EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVN 323 EDP V +A + G TG+VT L +G FV I +GVEGLVH +E + HP ++V+ Sbjct: 188 EDPLVLVAGQ--SGLVTTGQVTKLVPFGAFVRIADGVEGLVHNTEFR-DDPVEHPGQIVS 244 Query: 324 VGDVVEVMVLDIDEERRRISLGLKQCKAN 352 G+ + V ++++D R R++L + N Sbjct: 245 EGEEITVRIVEVDLVRHRLTLSTRNLPQN 273 Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 73/253 (28%), Positives = 123/253 (48%), Gaps = 13/253 (5%) Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEG----LVHVSEMDWTNKNI-HPSKVVNVGDVVEVM 331 G TGRV ++ D VE++ G G L + D T K + +PS+ V +G + Sbjct: 20 GEARTGRVISVEDSEALVELD-GFSGPGKALGRIPRGDLTRKALGNPSEAVGIGQRLTFE 78 Query: 332 VLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGID--- 388 V+ +D ++ + C+ + F +G G+++S+ +FG+F+ LDG D Sbjct: 79 VIAVDWQQECVWASTSACEDPDLRVFLLGLRRGATHRGQVQSVHNFGVFVNLDGEPDNQC 138 Query: 389 -GLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVAL 447 G + ++SW G A G+ + ++ VD R ++ L +K L EDP + Sbjct: 139 TGFIRGPELSWRRIGHPA-DAVTAGERVVGEIIGVDTRRGQVQLSLKALQEDPL--VLVA 195 Query: 448 NKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTG 507 + G + TG+VT + GA V +ADGVEG + +E D VE ++S G+E+ + Sbjct: 196 GQSGLVTTGQVTKLVPFGAFVRIADGVEGLVHNTEFRDDPVEHPGQIVSEGEEITVRIVE 255 Query: 508 VDRKNRAISLSVR 520 VD ++LS R Sbjct: 256 VDLVRHRLTLSTR 268 Score = 75.5 bits (184), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 71/278 (25%), Positives = 126/278 (45%), Gaps = 16/278 (5%) Query: 173 VIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDG----LLHIT--DMAWK 226 + E ++S L L G G V ++ D A V+L G G L I D+ K Sbjct: 1 MTEPQSSEALKDFLSTLLIGEARTGRVISVEDSEALVELDGFSGPGKALGRIPRGDLTRK 60 Query: 227 RVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAI-AKRYPEGTKLTGRVT 285 + +PSE V +G +T +V+ D ++ V EDP + + G G+V Sbjct: 61 ALGNPSEAVGIGQRLTFEVIAVDWQQECVWASTSAC-EDPDLRVFLLGLRRGATHRGQVQ 119 Query: 286 NLTDYGCFV----EIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRR 341 ++ ++G FV E + G + E+ W HP+ V G+ V ++ +D R + Sbjct: 120 SVHNFGVFVNLDGEPDNQCTGFIRGPELSWRRIG-HPADAVTAGERVVGEIIGVDTRRGQ 178 Query: 342 ISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVA 401 + L LK + +P A G G++ + FG F+ + G++GLVH ++ + Sbjct: 179 VQLSLKALQEDPLVLVA--GQSGLVTTGQVTKLVPFGAFVRIADGVEGLVHNTEFRDDPV 236 Query: 402 GEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAED 439 E + +G+EI +++VD R R++L + L ++ Sbjct: 237 -EHPGQIVSEGEEITVRIVEVDLVRHRLTLSTRNLPQN 273 >UniRef50_B0SDD9 30S Ribosomal protein S1 n=6 Tax=Leptospira RepID=B0SDD9_LEPBA Length = 385 Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 100/380 (26%), Positives = 184/380 (48%), Gaps = 20/380 (5%) Query: 5 FAQLFEESLKEIET-RPGSIVRGVVVAIDKDVVLV-DAGLKSESAIPAEQFKNAQGELEI 62 F +L EES K+ ++ PGS V A+ D V + K I E+++ ++ Sbjct: 8 FDRLLEESFKKRQSIEPGSRHEAKVTAVKNDYVFIRTVENKVIGNISTEEWRE---DVLP 64 Query: 63 QVGDEVDVAL--DAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 ++GD + V + D + T LS + LE A + V G + + GG+ Sbjct: 65 KIGDHIVVYFLKENSGDFYFTTCLSADNLTEE----NLELANQFEIPVLGQMLQEGSGGW 120 Query: 121 TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 V+L AF+P S +DV ++ GK ++F + +L +K+N +++S++ + + E Sbjct: 121 DVKLGSYTAFVPFSQLDVS--LKGKNIGGKRIKFIISELGKKQNKILLSQKKIADKERET 178 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 ++ L + L+ GM V VK++ +G VD+ G+D L+ ++ +K+ + VG+ Sbjct: 179 KKQLLRDELKVGMFVSCNVKSIHKFGLIVDMDGLDALVPQSEATYKKNPDLTTEFRVGET 238 Query: 241 ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV 300 + K+L D ++SL +K DPW + E ++G V ++ +G FV + E Sbjct: 239 LRAKILTLDWSTNKISLSVKDFLSDPWSGKLP-FKESDIVSGTVESIKPFGLFVRLGEDF 297 Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGL-KQCKANPWQQFAE 359 GLV E + + V G +EV VL+I+ E+R+I+L + K +A ++ + Sbjct: 298 SGLVPNKESGVPQRTPL-NTVFQPGQKLEVFVLEINPEKRQIALSITKAAEAKDRMEYQD 356 Query: 360 THNKGDRVEGKIKSITDFGI 379 +K D S++ FG+ Sbjct: 357 YLSKDDATT----SVSSFGL 372 Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 49/191 (25%), Positives = 90/191 (47%), Gaps = 3/191 (1%) Query: 364 GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVD 423 G V +KSI FG+ + +DG +D LV S+ ++ + E++ G+ + A +L +D Sbjct: 190 GMFVSCNVKSIHKFGLIVDMDG-LDALVPQSEATYK-KNPDLTTEFRVGETLRAKILTLD 247 Query: 424 AERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEA 483 +ISL VK DP++ + K+ IV+G V ++ G V L + G + E+ Sbjct: 248 WSTNKISLSVKDFLSDPWSGKLPF-KESDIVSGTVESIKPFGLFVRLGEDFSGLVPNKES 306 Query: 484 SRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFS 543 + V G ++E ++ + R I+LS+ EA ++ ++DA S Sbjct: 307 GVPQRTPLNTVFQPGQKLEVFVLEINPEKRQIALSITKAAEAKDRMEYQDYLSKDDATTS 366 Query: 544 NNAMAEAFKAA 554 ++ A K + Sbjct: 367 VSSFGLALKQS 377 >UniRef50_C4G9K7 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4G9K7_9FIRM Length = 294 Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 78/262 (29%), Positives = 132/262 (50%), Gaps = 4/262 (1%) Query: 16 IETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQG---ELEIQVGDEVDVAL 72 I+ G IV V+ + V VD I E +G ++ G + + Sbjct: 3 IKYEVGDIVNCEVLGVSDHEVSVDLNAGKIGIIAFEDLSEEEGYDPHKHLRNGKHLTAQI 62 Query: 73 DAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLP 132 +++DG G LS A+ +AW L+ A+ ET+T + +VKGG L G+RAF+P Sbjct: 63 TSLDDGRGNIRLSVNAARHTDAWDQLKDAHSANETLTVHVREQVKGGVVAYLKGLRAFIP 122 Query: 133 GSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEG 192 S + V + G++LE K+ ++ + +V+S RAV + + E+ L+ L+ G Sbjct: 123 ASQLAASYVDNLADFVGRDLEVKIDSIEPAKRRLVLSARAVEQEKKRLEQQAKLDALEVG 182 Query: 193 MEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRE 251 V+G V L D+GAFV++ G+DGL+HI+ ++ KRV+ + + VG ++ VK+ Sbjct: 183 SIVEGTVARLKDFGAFVNIADGLDGLVHISQISLKRVEKVEDALRVGQKVRVKITGMKDG 242 Query: 252 RTRVSLGLKQLGEDPWVAIAKR 273 + +S+ +L E P A R Sbjct: 243 KVSLSMKAVELLERPSKEAAAR 264 Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 60/283 (21%), Positives = 125/283 (44%), Gaps = 12/283 (4%) Query: 273 RYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMV 332 +Y G + V ++D+ V++ G G++ ++ + P K + G + + Sbjct: 4 KYEVGDIVNCEVLGVSDHEVSVDLNAGKIGIIAFEDLS-EEEGYDPHKHLRNGKHLTAQI 62 Query: 333 LDIDEERRRISLGLKQCK-ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLV 391 +D+ R I L + + + W Q + H+ + + ++ G+ L G + + Sbjct: 63 TSLDDGRGNIRLSVNAARHTDAWDQLKDAHSANETLTVHVREQVKGGVVAYLKG-LRAFI 121 Query: 392 HLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDP--FNNWVALN- 448 S ++ + A ++ G ++ + ++ + R+ L + + ++ L+ Sbjct: 122 PASQLAASYVDNLA--DFV-GRDLEVKIDSIEPAKRRLVLSARAVEQEKKRLEQQAKLDA 178 Query: 449 -KKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTG 507 + G+IV G V + GA V +ADG++G + S+ S RVE L VG +V K TG Sbjct: 179 LEVGSIVEGTVARLKDFGAFVNIADGLDGLVHISQISLKRVEKVEDALRVGQKVRVKITG 238 Query: 508 VDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEA 550 + K+ +SLS++A + + A K +D + A E+ Sbjct: 239 M--KDGKVSLSMKAVELLERPSKEAAARKAQDEQVARYADRES 279 >UniRef50_UPI00018545D5 30S ribosomal protein S1 n=2 Tax=Helicobacter pylori RepID=UPI00018545D5 Length = 283 Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 71/251 (28%), Positives = 138/251 (54%), Gaps = 9/251 (3%) Query: 21 GSIVRGVVVAIDKD--VVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDG 78 G+I G++V+I+++ +V G K+E + + + +G+L Q D + V + E G Sbjct: 34 GTIKEGLIVSINENDGYAMVSVGGKTEGRLALSEITDEKGQLLYQKNDPIIVHVS--EKG 91 Query: 79 FGETLLSREKAKRHEAWITLEKAYEDAET--VTGVINGKVKGGFTVELNGIRAFLPGSLV 136 ++ ++ + + +E+ E+ E + G I GK KGG+ VE G+ FL S Sbjct: 92 EHPSVSYKKAISQQKIQAKIEELGENYENAIIEGKIVGKNKGGYIVESQGVEYFLSRSHS 151 Query: 137 DVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVK 196 ++ D H+ GK ++ +I++D++ +++ +SR+ E + + + E L+ V Sbjct: 152 SLK--NDANHI-GKRIKACIIRVDKENHSINISRKRFFEVNDKRQLEVSKELLEATEPVL 208 Query: 197 GIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVS 256 G+V+ +T +G FV+ G++GL+H ++++ K +P + GDE+ VK + +D E+ R+S Sbjct: 209 GVVRQITPFGIFVEAKGIEGLVHYSEISHKGPVNPEKYYKEGDEVYVKAIAYDAEKRRLS 268 Query: 257 LGLKQLGEDPW 267 L +K EDPW Sbjct: 269 LSIKATIEDPW 279 Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 52/195 (26%), Positives = 100/195 (51%), Gaps = 12/195 (6%) Query: 167 VVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWK 226 V ++A+ + + A+ ++L EN + + ++G + G V+ GV+ L + + K Sbjct: 96 VSYKKAISQQKIQAKIEELGENYENAI-IEGKIVGKNKGGYIVESQGVEYFLSRSHSSLK 154 Query: 227 RVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGE---DPWVAIAKRYPEGTK-LTG 282 ++ ++G I +++ D+E +++ K+ E + ++K E T+ + G Sbjct: 155 -----NDANHIGKRIKACIIRVDKENHSINISRKRFFEVNDKRQLEVSKELLEATEPVLG 209 Query: 283 RVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRI 342 V +T +G FVE + G+EGLVH SE+ ++P K GD V V + D E+RR+ Sbjct: 210 VVRQITPFGIFVEAK-GIEGLVHYSEISHKGP-VNPEKYYKEGDEVYVKAIAYDAEKRRL 267 Query: 343 SLGLKQCKANPWQQF 357 SL +K +PW++ Sbjct: 268 SLSIKATIEDPWEEI 282 Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 55/194 (28%), Positives = 93/194 (47%), Gaps = 22/194 (11%) Query: 252 RTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDW 311 + ++ +++LGE+ AI + G++ G VE +GVE + S Sbjct: 104 QQKIQAKIEELGENYENAI---------IEGKIVGKNKGGYIVE-SQGVEYFLSRSHSSL 153 Query: 312 TNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC-KANPWQQF---AETHNKGDRV 367 N H +G ++ ++ +D+E I++ K+ + N +Q E + V Sbjct: 154 KNDANH------IGKRIKACIIRVDKENHSINISRKRFFEVNDKRQLEVSKELLEATEPV 207 Query: 368 EGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERE 427 G ++ IT FGIF+ G I+GLVH S+IS + YK+GDE+ + DAE+ Sbjct: 208 LGVVRQITPFGIFVEAKG-IEGLVHYSEISHK-GPVNPEKYYKEGDEVYVKAIAYDAEKR 265 Query: 428 RISLGVKQLAEDPF 441 R+SL +K EDP+ Sbjct: 266 RLSLSIKATIEDPW 279 >UniRef50_C9NIQ1 RNA binding S1 domain protein n=2 Tax=Streptomyces RepID=C9NIQ1_9ACTO Length = 503 Score = 108 bits (269), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 66/187 (35%), Positives = 99/187 (52%), Gaps = 7/187 (3%) Query: 167 VVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYG-AFVDLGGVDGLLHITDMAW 225 VV R E + L+ LQ G V G V +G FVD+ G +G ++I +++W Sbjct: 316 VVRARWRTEPTPEDRKWAFLKTLQPGQVVTGTVTETASFGVTFVDVDGYEGFINIPELSW 375 Query: 226 KRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVT 285 + V HP+++V+VG I VL D R +++L L+ + +DP + + GT L GRVT Sbjct: 376 RSVAHPADVVSVGQRIHAGVLGVDGVRAQMALSLRAVQDDPMQQLTGQV--GTTLPGRVT 433 Query: 286 NLTDYGCFVEIEE---GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRI 342 + +G FV IEE G GLVH SE+ + P + VG + V +LD+D RRI Sbjct: 434 KIVPFGVFVRIEEIENGFAGLVHNSEL-LGRQEKEPQGGIEVGSTLRVKILDVDLGSRRI 492 Query: 343 SLGLKQC 349 +L +Q Sbjct: 493 TLSQRQA 499 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 17/175 (9%) Query: 269 AIAKRYPEGTKLTGRVTNLTDYG-CFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDV 327 A K G +TG VT +G FV+++ G EG +++ E+ W + HP+ VV+VG Sbjct: 333 AFLKTLQPGQVVTGTVTETASFGVTFVDVD-GYEGFINIPELSWRSVA-HPADVVSVGQR 390 Query: 328 VEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIG---LD 384 + VL +D R +++L L+ + +P QQ T G + G++ I FG+F+ ++ Sbjct: 391 IHAGVLGVDGVRAQMALSLRAVQDDPMQQL--TGQVGTTLPGRVTKIVPFGVFVRIEEIE 448 Query: 385 GGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAV----VLQVDAERERISLGVKQ 435 G GLVH S++ + +E +E + G E+ + +L VD RI+L +Q Sbjct: 449 NGFAGLVHNSEL---LGRQE--KEPQGGIEVGSTLRVKILDVDLGSRRITLSQRQ 498 Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust. Identities = 55/199 (27%), Positives = 83/199 (41%), Gaps = 24/199 (12%) Query: 341 RISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNV 400 R +LG+ + + P + A V + S+ G+ G+ DG +H + V Sbjct: 219 RETLGIVRARLTPRARLAVWPALSPDVGAVLGSLPREGLVEGVWQDTDGRLHSA-----V 273 Query: 401 AGEEAVREY--KKGDEIAAVVLQVDAERERISLGVKQLAE-----------DPF---NNW 444 A E E + AA +L +DA+ ER+ L L + +P W Sbjct: 274 ADEADYVELTTRMKGAAAAALLSIDAD-ERVPLFTAVLPDTDGVVRARWRTEPTPEDRKW 332 Query: 445 VALN--KKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVE 502 L + G +VTG VT + G T DG EG++ E S V V+SVG + Sbjct: 333 AFLKTLQPGQVVTGTVTETASFGVTFVDVDGYEGFINIPELSWRSVAHPADVVSVGQRIH 392 Query: 503 AKFTGVDRKNRAISLSVRA 521 A GVD ++LS+RA Sbjct: 393 AGVLGVDGVRAQMALSLRA 411 >UniRef50_B4WRF0 S1 RNA binding domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WRF0_9SYNE Length = 304 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 77/267 (28%), Positives = 138/267 (51%), Gaps = 13/267 (4%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK-NAQGELE 61 E FA+ E+ ++ + GS++ G V + D VD G KS + +P ++ ++ LE Sbjct: 18 EDFAKALEQ--QDYQFSRGSVITGKVETHESDGAYVDIGGKSAAFLPTKEASIDSDILLE 75 Query: 62 --IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGG 119 + +G E + +D G+ ++S + E W L + E+ + + I+G KGG Sbjct: 76 EILPIGTERKFLIIRDQDANGQLVISIRAMEIKELWERLRERQENGDVLEVTISGSNKGG 135 Query: 120 FTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 T +++G+RAF+P S + R V D L G + +++D+++N +++S R Sbjct: 136 VTADVSGLRAFIPRSHL-ARRVEDLDTLMGATINAAFLEVDEEKNKLLLSERI------- 187 Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGD 239 A R + +L +G ++G + +L +GAFVD GG GLLHI ++ + ++ VGD Sbjct: 188 AARATAMSSLTKGELIEGTIASLKPFGAFVDFGGASGLLHIKQISKSYISALGDVFKVGD 247 Query: 240 EITVKVLKFDRERTRVSLGLKQLGEDP 266 I VL D +R R++L + L + P Sbjct: 248 PIKAVVLNIDEQRGRIALSTQVLEKYP 274 Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 63/119 (52%), Gaps = 9/119 (7%) Query: 324 VGDVVEVMVLDIDEERRRISLGLK-QCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIG 382 +G + L++DEE+ ++ L + +A KG+ +EG I S+ FG F+ Sbjct: 163 MGATINAAFLEVDEEKNKLLLSERIAARATAMSSL----TKGELIEGTIASLKPFGAFVD 218 Query: 383 LDGGIDGLVHLSDISWNVAGEEAVRE-YKKGDEIAAVVLQVDAERERISLGVKQLAEDP 440 GG GL+H+ IS + A+ + +K GD I AVVL +D +R RI+L + L + P Sbjct: 219 F-GGASGLLHIKQISKSYIS--ALGDVFKVGDPIKAVVLNIDEQRGRIALSTQVLEKYP 274 >UniRef50_B7FU58 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FU58_PHATR Length = 284 Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 74/251 (29%), Positives = 134/251 (53%), Gaps = 18/251 (7%) Query: 22 SIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALD----AVED 77 ++V+G V LVD G K+ + +P +Q + +L I+ +D ++ + ED Sbjct: 25 AVVQGTAVEYSGSGCLVDIGAKASAYLP-DQEASLDQDLNIEDAVPLDTPMEFQIISEED 83 Query: 78 GFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGS-LV 136 G+ L+S ++ + +AW + E+ + + + +GG + G+RAFLPGS L Sbjct: 84 ENGQLLVSIKRIEYKKAWEKVLSMAEEDQILEAKVIAVNRGGAICLVEGLRAFLPGSHLT 143 Query: 137 DVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVS-RRAVIESENSAERDQLLENLQEGMEV 195 P D + G L+ K ++++Q+ N +VVS R+AV+E Q + +L G V Sbjct: 144 GQLPDEDLI---GNNLQLKFLEVNQETNKLVVSNRKAVVE--------QQMADLSRGDLV 192 Query: 196 KGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRV 255 G+VK L YGAFV++GG+ GLLHI+ +++ R+ +++ G ++ ++ D+ R+ Sbjct: 193 AGMVKALKPYGAFVEVGGMSGLLHISQISYDRIDDLEKVLQPGMQVKCMIIDHDKVNGRI 252 Query: 256 SLGLKQLGEDP 266 +L K L +P Sbjct: 253 ALSTKTLEPEP 263 Score = 48.9 bits (115), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 31/117 (26%), Positives = 69/117 (58%), Gaps = 5/117 (4%) Query: 324 VGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGL 383 +G+ +++ L++++E ++ + + KA QQ A+ ++GD V G +K++ +G F+ + Sbjct: 152 IGNNLQLKFLEVNQETNKLVVSNR--KAVVEQQMADL-SRGDLVAGMVKALKPYGAFVEV 208 Query: 384 DGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDP 440 GG+ GL+H+S IS++ ++ + + G ++ +++ D RI+L K L +P Sbjct: 209 -GGMSGLLHISQISYDRI-DDLEKVLQPGMQVKCMIIDHDKVNGRIALSTKTLEPEP 263 >UniRef50_D2AQV7 30S ribosomal protein S1 n=5 Tax=Actinomycetales RepID=D2AQV7_STRRD Length = 294 Score = 104 bits (260), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 72/225 (32%), Positives = 117/225 (52%), Gaps = 16/225 (7%) Query: 139 RPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGI 198 RP + L + G ++ +VI +D + V +S A +EN + L+ L+ G + G Sbjct: 62 RPAAEILEV-GAKVSSEVIAVDLQERRVRLSWSA---TENP-QLWAYLKALRPGQRLSGT 116 Query: 199 VKNLTDYGAFVDLG-GVD-------GLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDR 250 V + +G FVDL G D G + + +++W+R + PSE+V+VG+ I+ +VL FD Sbjct: 117 VAAIERFGVFVDLDDGPDHPVFPGVGFITMPELSWRRFEDPSEVVSVGERISCEVLTFDT 176 Query: 251 ERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMD 310 + L+ DP+ A+ G L G VT + +G FV + + EGLVH+SE+ Sbjct: 177 HNGEARVSLRATQPDPFQQFARGVHVGQILYGPVTKVVPFGAFVRVADDAEGLVHLSEL- 235 Query: 311 WTNKNIHPS-KVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPW 354 T + + V +GD V V+V++ID RRR++L Q W Sbjct: 236 -TALPVAAALDAVQIGDEVTVIVIEIDPLRRRLALSRCQAAMKTW 279 Score = 101 bits (251), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 65/232 (28%), Positives = 121/232 (52%), Gaps = 14/232 (6%) Query: 216 GLLHITDMAWKRVKHPS-EIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDP--WVAIAK 272 G + D++W+ P+ EI+ VG +++ +V+ D + RV L E+P W + Sbjct: 48 GSISWLDLSWRSFGRPAAEILEVGAKVSSEVIAVDLQERRVRLSWSAT-ENPQLWAYLKA 106 Query: 273 RYPEGTKLTGRVTNLTDYGCFVEIEEGVE-------GLVHVSEMDWTNKNIHPSKVVNVG 325 P G +L+G V + +G FV++++G + G + + E+ W + PS+VV+VG Sbjct: 107 LRP-GQRLSGTVAAIERFGVFVDLDDGPDHPVFPGVGFITMPELSW-RRFEDPSEVVSVG 164 Query: 326 DVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDG 385 + + VL D + L+ + +P+QQFA + G + G + + FG F+ + Sbjct: 165 ERISCEVLTFDTHNGEARVSLRATQPDPFQQFARGVHVGQILYGPVTKVVPFGAFVRVAD 224 Query: 386 GIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLA 437 +GLVHLS+++ + A+ + GDE+ +V+++D R R++L Q A Sbjct: 225 DAEGLVHLSELT-ALPVAAALDAVQIGDEVTVIVIEIDPLRRRLALSRCQAA 275 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 65/252 (25%), Positives = 108/252 (42%), Gaps = 11/252 (4%) Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVE---GLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVL 333 G LTG V +T V ++ G + ++ W + ++++ VG V V+ Sbjct: 20 GDVLTGTVAEVTRSQTTVLLDAFTSDPVGSISWLDLSWRSFGRPAAEILEVGAKVSSEVI 79 Query: 334 DIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGID----- 388 +D + RR+ L + + + G R+ G + +I FG+F+ LD G D Sbjct: 80 AVDLQERRVRLSWSATENPQLWAYLKALRPGQRLSGTVAAIERFGVFVDLDDGPDHPVFP 139 Query: 389 --GLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVA 446 G + + ++SW E+ G+ I+ VL D + ++ DPF + Sbjct: 140 GVGFITMPELSWR-RFEDPSEVVSVGERISCEVLTFDTHNGEARVSLRATQPDPFQQFAR 198 Query: 447 LNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFT 506 G I+ G VT V GA V +AD EG + SE + V A + +GDEV Sbjct: 199 GVHVGQILYGPVTKVVPFGAFVRVADDAEGLVHLSELTALPVAAALDAVQIGDEVTVIVI 258 Query: 507 GVDRKNRAISLS 518 +D R ++LS Sbjct: 259 EIDPLRRRLALS 270 Score = 58.2 bits (139), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 49/177 (27%), Positives = 80/177 (45%), Gaps = 14/177 (7%) Query: 357 FAETHNKGDRVEGKIKSITDFGIFIGLDGGID---GLVHLSDISWNVAGEEAVREYKKGD 413 F T N GD + G + +T + LD G + D+SW G A + G Sbjct: 13 FLRTVNVGDVLTGTVAEVTRSQTTVLLDAFTSDPVGSISWLDLSWRSFGRPAAEILEVGA 72 Query: 414 EIAAVVLQVDAERERISLGVKQLAEDPFNNWVALN--KKGAIVTGKVTAVDAKGATVELA 471 ++++ V+ VD + R+ L E+P W L + G ++G V A++ G V+L Sbjct: 73 KVSSEVIAVDLQERRVRLSWSA-TENP-QLWAYLKALRPGQRLSGTVAAIERFGVFVDLD 130 Query: 472 DGVE-------GYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRA 521 DG + G++ E S R ED + V+SVG+ + + D N +S+RA Sbjct: 131 DGPDHPVFPGVGFITMPELSWRRFEDPSEVVSVGERISCEVLTFDTHNGEARVSLRA 187 >UniRef50_P29344 30S ribosomal protein S1, chloroplastic n=21 Tax=Embryophyta RepID=RR1_SPIOL Length = 411 Score = 104 bits (259), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 81/252 (32%), Positives = 131/252 (51%), Gaps = 18/252 (7%) Query: 21 GSIVRGVVVAIDKDVVLVDAGLKSESAIP-AE----QFKNAQGELEIQVGDEVDVALDAV 75 GS V+G V D + LVD KS + +P AE + KN + E I G + + Sbjct: 96 GSRVKGTVFCTDANGALVDITAKSSAYLPLAEACIYRIKNVE-EAGIIPGVREEFVIIGE 154 Query: 76 EDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSL 135 + +LS + + AW + + V G I G KGG + G+R F+P S Sbjct: 155 NEADDSLILSLRQIQYELAWERCRQLQAEDVVVKGKIVGANKGGVVALVEGLRGFVPFSQ 214 Query: 136 VDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVS-RRAVIESENSAERDQLLENLQEGME 194 + + + L LE KE+ K +++D++++ +V+S R+A+ +S+ L G Sbjct: 215 ISSKSSAEEL-LE-KEIPLKFVEVDEEQSRLVMSNRKAMADSQ---------AQLGIGSV 263 Query: 195 VKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTR 254 V G V++L YGAF+D+GG++GLLH++ ++ RV + ++ GD + V +L DRER R Sbjct: 264 VTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGR 323 Query: 255 VSLGLKQLGEDP 266 VSL K+L P Sbjct: 324 VSLSTKKLEPTP 335 Score = 65.5 bits (158), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 66/254 (25%), Positives = 126/254 (49%), Gaps = 25/254 (9%) Query: 112 INGKVKGG-FTVELNGI--------RAFLP---GSLVDVRPVRDTLHLEGKELEFKVIKL 159 + +VKG F + NG A+LP + ++ V + + G EF +I Sbjct: 95 MGSRVKGTVFCTDANGALVDITAKSSAYLPLAEACIYRIKNVEEAGIIPGVREEFVIIGE 154 Query: 160 DQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLH 219 ++ +++++S R I+ E + ER + L+ E + VKG + G + G+ G + Sbjct: 155 NEADDSLILSLRQ-IQYELAWERCRQLQ--AEDVVVKGKIVGANKGGVVALVEGLRGFVP 211 Query: 220 ITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTK 279 + ++ K E++ EI +K ++ D E++R+ + ++ D + G+ Sbjct: 212 FSQISSKSSAE--ELLE--KEIPLKFVEVDEEQSRLVMSNRKAMADSQAQLGI----GSV 263 Query: 280 LTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEER 339 +TG V +L YG F++I G+ GL+HVS++ ++ + V+ GD ++VM+L D ER Sbjct: 264 VTGTVQSLKPYGAFIDIG-GINGLLHVSQISH-DRVSDIATVLQPGDTLKVMILSHDRER 321 Query: 340 RRISLGLKQCKANP 353 R+SL K+ + P Sbjct: 322 GRVSLSTKKLEPTP 335 Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 67/258 (25%), Positives = 118/258 (45%), Gaps = 19/258 (7%) Query: 188 NLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSE---IVNVGDEITV 243 N + G VKG V GA VD+ L + + R+K+ E I V +E + Sbjct: 92 NSEMGSRVKGTVFCTDANGALVDITAKSSAYLPLAEACIYRIKNVEEAGIIPGVREEFVI 151 Query: 244 KVLKFDRERTRVSLGLKQLG-EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 + + + L L+Q+ E W + E + G++ + G V + EG+ G Sbjct: 152 --IGENEADDSLILSLRQIQYELAWERCRQLQAEDVVVKGKIVG-ANKGGVVALVEGLRG 208 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHN 362 V S++ + S + + + +++DEE+ R+ + ++ A+ Q Sbjct: 209 FVPFSQISSKS-----SAEELLEKEIPLKFVEVDEEQSRLVMSNRKAMADSQAQLG---- 259 Query: 363 KGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQV 422 G V G ++S+ +G FI + GGI+GL+H+S IS + + A + GD + ++L Sbjct: 260 IGSVVTGTVQSLKPYGAFIDI-GGINGLLHVSQISHDRVSDIATV-LQPGDTLKVMILSH 317 Query: 423 DAERERISLGVKQLAEDP 440 D ER R+SL K+L P Sbjct: 318 DRERGRVSLSTKKLEPTP 335 Score = 61.6 bits (148), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 63/246 (25%), Positives = 114/246 (46%), Gaps = 14/246 (5%) Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMD-WTNKNIHPSKVVNVGDVVEVMVLDI 335 G+++ G V G V+I + ++E + KN+ + ++ G E +++ Sbjct: 96 GSRVKGTVFCTDANGALVDITAKSSAYLPLAEACIYRIKNVEEAGIIP-GVREEFVIIGE 154 Query: 336 DEERRRISLGLKQCKAN-PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLS 394 +E + L L+Q + W++ + + V+GKI G+ + L G+ G V S Sbjct: 155 NEADDSLILSLRQIQYELAWERCRQLQAEDVVVKGKIVGANKGGV-VALVEGLRGFVPFS 213 Query: 395 DISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIV 454 IS + EE + + EI ++VD E+ R+ + ++ D A G++V Sbjct: 214 QISSKSSAEELLEK-----EIPLKFVEVDEEQSRLVMSNRKAMAD----SQAQLGIGSVV 264 Query: 455 TGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRA 514 TG V ++ GA +++ G+ G L S+ S DRV D VL GD ++ DR+ Sbjct: 265 TGTVQSLKPYGAFIDIG-GINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGR 323 Query: 515 ISLSVR 520 +SLS + Sbjct: 324 VSLSTK 329 >UniRef50_B9MRX3 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MRX3_ANATD Length = 663 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 85/352 (24%), Positives = 169/352 (48%), Gaps = 19/352 (5%) Query: 5 FAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQ-FKNAQGELE-- 61 F +L + S + + G +V G ++ +++D +LVD G K+E I ++ KN L+ Sbjct: 291 FERLIDRSF--LTVQRGEVVNGRIIKVEEDYLLVDIGYKAEGIIYKDEVIKNGNVNLKDL 348 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 ++G+ ++ + D G +LS+ +A + L YE+ ETV ++ + Sbjct: 349 FKIGEVIEAVVIKESDEEGNVVLSKYRADILHGFEELLSKYENKETVRVIVKSIKEKSIV 408 Query: 122 VELNGIRAFLP----GSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESE 177 + G ++P G V + GK E ++ + +++ SR+++++ Sbjct: 409 CDFRGTNVYVPISQWGEDVQTSDI-------GKIFEIEITDVSKEKKIAFGSRKSLLKQR 461 Query: 178 NSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAW-KRVKHPSEIVN 236 + + +L E +G V + + G V+ + G + +++ + K+ ++ Sbjct: 462 EEERFIKQINSLDFSREYEGTVVEIREKGIVVNFENLRGFVPASEIGYLKKGAGIKKLFE 521 Query: 237 VGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI 296 +G+++ VK+L D+ + ++ L +K+ +D W+ K G + VT + +G V I Sbjct: 522 LGEKVKVKILDIDKNKKQIYLSVKKTQDDEWIKKIKNLYLGMLVDCEVTKVLPFGLVVWI 581 Query: 297 -EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLK 347 E V+G VHVS + N P + VGD + V++IDEE+RRI+L LK Sbjct: 582 TEHDVDGFVHVSNIP-LGYNQRPHNLYKVGDSLRAKVIEIDEEKRRIALSLK 632 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 79/298 (26%), Positives = 145/298 (48%), Gaps = 19/298 (6%) Query: 149 GKELEFKVIKLDQKRNNVVVSR-RAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGA 207 G+ +E VIK + NVV+S+ RA I ++LL + V+ IVK++ + Sbjct: 352 GEVIEAVVIKESDEEGNVVLSKYRADI----LHGFEELLSKYENKETVRVIVKSIKEKSI 407 Query: 208 FVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRER-----TRVSLGLKQL 262 D G + + I+ W S+I G +++ +E+ +R SL LKQ Sbjct: 408 VCDFRGTNVYVPISQ--WGEDVQTSDI---GKIFEIEITDVSKEKKIAFGSRKSL-LKQR 461 Query: 263 GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVV 322 E+ ++ + G V + + G V E + G V SE+ + K K+ Sbjct: 462 EEERFIKQINSLDFSREYEGTVVEIREKGIVVNFE-NLRGFVPASEIGYLKKGAGIKKLF 520 Query: 323 NVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIG 382 +G+ V+V +LDID+ +++I L +K+ + + W + + G V+ ++ + FG+ + Sbjct: 521 ELGEKVKVKILDIDKNKKQIYLSVKKTQDDEWIKKIKNLYLGMLVDCEVTKVLPFGLVVW 580 Query: 383 L-DGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAED 439 + + +DG VH+S+I + YK GD + A V+++D E+ RI+L +K L E+ Sbjct: 581 ITEHDVDGFVHVSNIPLG-YNQRPHNLYKVGDSLRAKVIEIDEEKRRIALSLKDLHEE 637 >UniRef50_C9LAT8 Ribosomal protein S1 n=10 Tax=Clostridiales RepID=C9LAT8_RUMHA Length = 250 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 56/169 (33%), Positives = 102/169 (60%), Gaps = 3/169 (1%) Query: 95 WITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEF 154 W LE+ ED + G VKGG + GIRAF+P S + + V + K + Sbjct: 50 WDKLEQMKEDKTEFEVSVEGIVKGGVIAYVEGIRAFIPVSKLALNYVENPEDFLKKTITV 109 Query: 155 KVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-G 213 +V ++D++ N +V+S + +++ + AE+ +++++ G V+G V++L YGAF+DLG G Sbjct: 110 RVFEVDEQENRLVLSAKEILKEKADAEKRSKIDDIKVGSIVEGTVESLQTYGAFIDLGDG 169 Query: 214 VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQL 262 + GL+H++ ++ KR+K P ++++GD + KV+K E ++SL +K L Sbjct: 170 ISGLVHVSQISEKRIKSPKAVLSIGDTVKAKVIK--NEDGKISLSMKAL 216 Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 47/158 (29%), Positives = 85/158 (53%), Gaps = 15/158 (9%) Query: 195 VKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTR 254 V+GIVK G + G+ + ++ +A V++P + + ITV+V + D + R Sbjct: 67 VEGIVKG----GVIAYVEGIRAFIPVSKLALNYVENPEDFLK--KTITVRVFEVDEQENR 120 Query: 255 VSLGLKQLGEDPWVAIAKRYPE----GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMD 310 + L K++ ++ A + + G+ + G V +L YG F+++ +G+ GLVHVS++ Sbjct: 121 LVLSAKEILKEKADAEKRSKIDDIKVGSIVEGTVESLQTYGAFIDLGDGISGLVHVSQI- 179 Query: 311 WTNKNI-HPSKVVNVGDVVEVMVLDIDEERRRISLGLK 347 + K I P V+++GD V+ V I E +ISL +K Sbjct: 180 -SEKRIKSPKAVLSIGDTVKAKV--IKNEDGKISLSMK 214 Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 46/172 (26%), Positives = 84/172 (48%), Gaps = 10/172 (5%) Query: 354 WQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGD 413 W + + E ++ I G+ I GI + +S ++ N E ++ K Sbjct: 50 WDKLEQMKEDKTEFEVSVEGIVKGGV-IAYVEGIRAFIPVSKLALNYV--ENPEDFLK-K 105 Query: 414 EIAAVVLQVDAERERISLGVKQLAEDPFN----NWVALNKKGAIVTGKVTAVDAKGATVE 469 I V +VD + R+ L K++ ++ + + + K G+IV G V ++ GA ++ Sbjct: 106 TITVRVFEVDEQENRLVLSAKEILKEKADAEKRSKIDDIKVGSIVEGTVESLQTYGAFID 165 Query: 470 LADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRA 521 L DG+ G + S+ S R++ VLS+GD V+AK + ++ ISLS++A Sbjct: 166 LGDGISGLVHVSQISEKRIKSPKAVLSIGDTVKAKV--IKNEDGKISLSMKA 215 >UniRef50_Q5KH56 RRNA processing-related protein, putative n=2 Tax=Filobasidiella neoformans RepID=Q5KH56_CRYNE Length = 1484 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 99/376 (26%), Positives = 170/376 (45%), Gaps = 58/376 (15%) Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 ++ L+ G ++KG ++ LTD FV++ G VDG++H T A R+KHP + + + Sbjct: 523 VDELKVGQQLKGTIRRLTDKMLFVNVHGNVDGIVHPTHYADIRLKHPQKRFKPEGSVKAR 582 Query: 245 VLKFDRERTRVSLGLKQLGEDPWVAIAKRYPE---GTKLTGRVTNLTDYGCFVEIEEGVE 301 VL + R RV L LK+ + +A+ + + + G G V + D G VE+ G++ Sbjct: 583 VLYLEPTRNRVVLTLKKTFLESDLAVPQGFEDLKVGEVTLGSVLKIVDKGVIVELFAGLK 642 Query: 302 GLVHVSEMDWTN-KNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAET 360 + SE T+ KN+ S+ +G + V V+ +D RI + KQ AE Sbjct: 643 AFMPHSECSQTHIKNL--SEAFYIGKPLTVRVITVDASASRIVVSAKQAAPTAPATAAEK 700 Query: 361 HNKGDRVEGKIKSITDFGIFIGLDG-GIDGLVHLSDIS--WNVAGEEAVREYKKGDEIAA 417 G+ V G + + + + LDG G+ L+ LS++S + EE R K+G++I Sbjct: 701 LEVGEAVSGTVSQVHTEQVVVKLDGNGLTALLSLSNLSNQRHTGIEELRRSLKEGEKIDD 760 Query: 418 VVLQVDAERERISLGVKQLAEDPFNNWVALNKK--------------------------- 450 +V+ ++++P + + +N K Sbjct: 761 LVV---------------VSKNPVSGLIIVNIKKTITAKKEKAKKEDKAPSGISAHVKAI 805 Query: 451 -----GAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATL-VLSVGDEVEAK 504 G I+TG V ++G V+L + + G + ++S D A L+VG+EV+ Sbjct: 806 DAIEVGQIITGTVQEQTSQGYMVQLPNNLRGRVHPCDSSDDLALAAGHGPLTVGEEVKCY 865 Query: 505 FTGVDRKNRAISLSVR 520 V+R RAI LS R Sbjct: 866 VLDVNRSKRAIDLSTR 881 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 63/274 (22%), Positives = 127/274 (46%), Gaps = 42/274 (15%) Query: 268 VAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEM-------------DWTNK 314 + I K Y + K+T RV N D+G V ++G+EG VH+S + + Sbjct: 435 IPIGKVY-QSVKVT-RVLN--DWGVMVRTQDGLEGFVHISHLADERIPVLSNATPQFKAG 490 Query: 315 NIHPSKVVNVGDVVEVMVLDIDEE-RRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKS 373 +H ++V+ + V++L ++ ++ + + + K G +++G I+ Sbjct: 491 TLHRARVIGHSPMDGVLLLSFEQSVLSQLFMQVDELKV------------GQQLKGTIRR 538 Query: 374 ITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGV 433 +TD +F+ + G +DG+VH + + ++ + + +K + A VL ++ R R+ L + Sbjct: 539 LTDKMLFVNVHGNVDGIVHPTHYA-DIRLKHPQKRFKPEGSVKARVLYLEPTRNRVVLTL 597 Query: 434 KQ--LAED---P--FNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRD 486 K+ L D P F + K G + G V + KG VEL G++ ++ SE S+ Sbjct: 598 KKTFLESDLAVPQGFEDL----KVGEVTLGSVLKIVDKGVIVELFAGLKAFMPHSECSQT 653 Query: 487 RVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 +++ + +G + + VD I +S + Sbjct: 654 HIKNLSEAFYIGKPLTVRVITVDASASRIVVSAK 687 Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 63/277 (22%), Positives = 126/277 (45%), Gaps = 41/277 (14%) Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITD----MAWKRVKHPSEIVNVGDE 240 ++ ++ G + G V+ T G V L + G +H D +A P + VG+E Sbjct: 805 IDAIEVGQIITGTVQEQTSQGYMVQLPNNLRGRVHPCDSSDDLALAAGHGP---LTVGEE 861 Query: 241 ITVKVLKFDRERTRVSLGLK----QLGE---DPWVAIAKRYPEGTKLTGRVTNLTDYGCF 293 + VL +R + + L + Q E D + EG + G V N+ +G F Sbjct: 862 VKCYVLDVNRSKRAIDLSTRLSRVQGKENVVDREINTVDDLKEGESVRGLVKNIAGHGVF 921 Query: 294 VEIEEGVEGLVHVSEM------DWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLK 347 V + V + + E+ DW ++ + +V +L I+ I + L+ Sbjct: 922 VSLGRNVTARIMIKELFDEYVKDWKSR-------FEINQLVSGKILSINPGSNSIEMTLR 974 Query: 348 QCKANPWQQFAET-------HNKGDRVEGKIKSITDFGIFIGLDGG-IDGLVHLSDISWN 399 + NP + +T +G +V ++ + +G+F+ ++G + GL H S+I+ N Sbjct: 975 K---NPSKSAKKTALLSLSDFEEGQKVVAVVRKVEAYGMFLKIEGSNVSGLCHKSEITDN 1031 Query: 400 VAGE--EAVREYKKGDEIAAVVLQVDAERERISLGVK 434 + +A++ +++GD++ A ++ +D E+ +IS G+K Sbjct: 1032 RKADVAQALKGFREGDQVKAKIVSIDTEKGKISFGIK 1068 Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 72/272 (26%), Positives = 126/272 (46%), Gaps = 35/272 (12%) Query: 101 AYEDAETVTGVINGKVKGGFTVEL-NGIRAFLPGSLVDVRPV--RDTLHLE--------G 149 A E + +TG + + G+ V+L N +R V P D L L G Sbjct: 807 AIEVGQIITGTVQEQTSQGYMVQLPNNLRG-------RVHPCDSSDDLALAAGHGPLTVG 859 Query: 150 KELEFKVIKLDQKRNNVVVSRRA--VIESENSAERD-QLLENLQEGMEVKGIVKNLTDYG 206 +E++ V+ +++ + + +S R V EN +R+ +++L+EG V+G+VKN+ +G Sbjct: 860 EEVKCYVLDVNRSKRAIDLSTRLSRVQGKENVVDREINTVDDLKEGESVRGLVKNIAGHG 919 Query: 207 AFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGED 265 FV LG V + I ++ + VK + ++ K+L + + + L++ + Sbjct: 920 VFVSLGRNVTARIMIKELFDEYVKDWKSRFEINQLVSGKILSINPGSNSIEMTLRK---N 976 Query: 266 PWVAIAKR-------YPEGTKLTGRVTNLTDYGCFVEIE-EGVEGLVHVSEMDWTNKN-- 315 P + K + EG K+ V + YG F++IE V GL H SE+ K Sbjct: 977 PSKSAKKTALLSLSDFEEGQKVVAVVRKVEAYGMFLKIEGSNVSGLCHKSEITDNRKADV 1036 Query: 316 IHPSKVVNVGDVVEVMVLDIDEERRRISLGLK 347 K GD V+ ++ ID E+ +IS G+K Sbjct: 1037 AQALKGFREGDQVKAKIVSIDTEKGKISFGIK 1068 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 86/397 (21%), Positives = 162/397 (40%), Gaps = 35/397 (8%) Query: 155 KVIKLDQKRNNVVVS-RRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-G 212 +V+ L+ RN VV++ ++ +ES+ + Q E+L+ G G V + D G V+L Sbjct: 582 RVLYLEPTRNRVVLTLKKTFLESDLAV--PQGFEDLKVGEVTLGSVLKIVDKGVIVELFA 639 Query: 213 GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAK 272 G+ + ++ + +K+ SE +G +TV+V+ D +R+ + KQ A+ Sbjct: 640 GLKAFMPHSECSQTHIKNLSEAFYIGKPLTVRVITVDASASRIVVSAKQAAPTAPATAAE 699 Query: 273 RYPEGTKLTGRVTNLTDYGCFVEIE-EGVEGLVHVSEMDWTNKN--------------IH 317 + G ++G V+ + V+++ G+ L+ +S + I Sbjct: 700 KLEVGEAVSGTVSQVHTEQVVVKLDGNGLTALLSLSNLSNQRHTGIEELRRSLKEGEKID 759 Query: 318 PSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNK-------GDRVEGK 370 VV+ V +++++I + K+ P A H K G + G Sbjct: 760 DLVVVSKNPVSGLIIVNIKKTITAKKEKAKKEDKAPSGISA--HVKAIDAIEVGQIITGT 817 Query: 371 IKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERIS 430 ++ T G + L + G VH D S ++A G+E+ VL V+ + I Sbjct: 818 VQEQTSQGYMVQLPNNLRGRVHPCDSSDDLALAAGHGPLTVGEEVKCYVLDVNRSKRAID 877 Query: 431 LGVK----QLAEDPFN---NWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEA 483 L + Q E+ + N V K+G V G V + G V L V + E Sbjct: 878 LSTRLSRVQGKENVVDREINTVDDLKEGESVRGLVKNIAGHGVFVSLGRNVTARIMIKEL 937 Query: 484 SRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 + V+D + V K ++ + +I +++R Sbjct: 938 FDEYVKDWKSRFEINQLVSGKILSINPGSNSIEMTLR 974 >UniRef50_B1XJQ5 30S ribosomal protein S1 like protein n=1 Tax=Synechococcus sp. PCC 7002 RepID=B1XJQ5_SYNP2 Length = 296 Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 80/265 (30%), Positives = 129/265 (48%), Gaps = 19/265 (7%) Query: 9 FEESLKE--IETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE----I 62 FE +L E + G +V G + D VLVD G KS P A GE + + Sbjct: 16 FEHALTEHDYQFEQGQVVTGKIFEHLSDGVLVDIGGKSPGFSPLRDALLA-GETDAHTAL 74 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 VG+ V+ + ++ G+ LSR K W L +A E +V + G +GG T Sbjct: 75 PVGENVEFLIVRGQNAEGQVTLSRRKLAEQRVWEDLAQAAEAGNSVQMRVTGSNRGGVTG 134 Query: 123 ELNGIRAFLPGS-LVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 ++ G+R F+P S LVD ++ L G+ L ++ DQ+R +V+S+R ++E Sbjct: 135 DIQGLRGFIPNSHLVD----KNIDDLMGQLLTVNFLEFDQERRKLVLSQRYAAQAE---- 186 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEI 241 ++ L G V G V N+ YG FV+L G+ GLLH + ++ K V+ + ++G + Sbjct: 187 ---VMRRLSIGALVSGTVVNIKPYGVFVELDGMTGLLHRSQISAKPVEQIEALFSIGQTV 243 Query: 242 TVKVLKFDRERTRVSLGLKQLGEDP 266 V + + R+SL L+ L + P Sbjct: 244 RVLITDIEESNNRISLSLQALEKFP 268 Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 78/290 (26%), Positives = 134/290 (46%), Gaps = 40/290 (13%) Query: 102 YEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTL-------HLE---GKE 151 +E + VTG I + G V++ G PG P+RD L H G+ Sbjct: 27 FEQGQVVTGKIFEHLSDGVLVDIGGKS---PG----FSPLRDALLAGETDAHTALPVGEN 79 Query: 152 LEFKVIKLDQKRNNVVVSRRAVIESENSAER--DQLLENLQEGMEVKGIVKNLTDYGAFV 209 +EF +++ V +SRR + E +R + L + + G V+ V G Sbjct: 80 VEFLIVRGQNAEGQVTLSRRKLAE-----QRVWEDLAQAAEAGNSVQMRVTGSNRGGVTG 134 Query: 210 DLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVA 269 D+ G+ G + + + K + +G +TV L+FD+ER ++ L + + Sbjct: 135 DIQGLRGFIPNSHLVDKNIDDL-----MGQLLTVNFLEFDQERRKLVLSQRYAAQ---AE 186 Query: 270 IAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHP-SKVVNVGDVV 328 + +R G ++G V N+ YG FVE+ +G+ GL+H S++ + K + + ++G V Sbjct: 187 VMRRLSIGALVSGTVVNIKPYGVFVEL-DGMTGLLHRSQI--SAKPVEQIEALFSIGQTV 243 Query: 329 EVMVLDIDEERRRISLGLKQCKANP---WQQF-AETHNKGDRVEGKIKSI 374 V++ DI+E RISL L+ + P +QF A N +RVE K + Sbjct: 244 RVLITDIEESNNRISLSLQALEKFPGEVIEQFDAVQTNAEERVEAARKKL 293 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 57/253 (22%), Positives = 109/253 (43%), Gaps = 19/253 (7%) Query: 273 RYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMV 332 ++ +G +TG++ G V+I G + + + + VG+ VE ++ Sbjct: 26 QFEQGQVVTGKIFEHLSDGVLVDIGGKSPGFSPLRDALLAGET-DAHTALPVGENVEFLI 84 Query: 333 LDIDEERRRISLGLKQ-CKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLV 391 + +++L ++ + W+ A+ G+ V+ ++ G+ G G+ G + Sbjct: 85 VRGQNAEGQVTLSRRKLAEQRVWEDLAQAAEAGNSVQMRVTGSNRGGV-TGDIQGLRGFI 143 Query: 392 ---HLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALN 448 HL D + + G + L+ D ER ++ L + A+ +++ Sbjct: 144 PNSHLVDKNIDDL---------MGQLLTVNFLEFDQERRKLVLSQRYAAQAEVMRRLSI- 193 Query: 449 KKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGV 508 GA+V+G V + G VEL DG+ G L S+ S VE + S+G V T + Sbjct: 194 --GALVSGTVVNIKPYGVFVEL-DGMTGLLHRSQISAKPVEQIEALFSIGQTVRVLITDI 250 Query: 509 DRKNRAISLSVRA 521 + N ISLS++A Sbjct: 251 EESNNRISLSLQA 263 >UniRef50_UPI0001913427 30S ribosomal protein S1 n=1 Tax=Salmonella enterica subsp. enterica serovar Typhi str. J185 RepID=UPI0001913427 Length = 76 Score = 101 bits (251), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 51/51 (100%), Positives = 51/51 (100%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAE 51 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAE Sbjct: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAE 51 >UniRef50_Q70DX8 Plastid ribosomal protein S1 n=6 Tax=Viridiplantae RepID=Q70DX8_CHLRE Length = 436 Score = 101 bits (251), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 80/273 (29%), Positives = 139/273 (50%), Gaps = 14/273 (5%) Query: 3 ESFAQLFEESLKEIET-----RPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQ--FKN 55 E +A ++EE + +E + G V G V+ +D D V+ G K+ + P + F Sbjct: 118 EEYADMYEEVEEMLEAVDYEFKVGDKVSGTVIEVDDDGAYVEIGAKAIAFCPVTECSFAR 177 Query: 56 AQGELE-IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVING 114 + LE ++ G + D + E+ +G+ ++S + W + + E+ TVT + Sbjct: 178 LKTPLEALRPGMKRDFMVVEDEEEYGQVIVSLAAMEATTFWQRIRQLQEEDITVTVSVES 237 Query: 115 KVKGGFTVELNGIRAFLPGSLVDVRPVRDTLH-LEGKELEFKVIKLDQKRNNVVVSRRAV 173 KGG V+ F+P S D + L G EL+ K +++D++ +V S + Sbjct: 238 VNKGGMLVKFGIYDGFIPVSQFGPSITPDNMESLVGFELQVKFLEVDEEAERLVFSHK-- 295 Query: 174 IESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSE 233 + ++ D ++ + G V G+V+++ YGAF+DLGGV GLLH++ ++ RV + Sbjct: 296 -RASSTVSND--IQGFKVGDVVAGVVQSVKPYGAFIDLGGVTGLLHVSQISHDRVLVLDK 352 Query: 234 IVNVGDEITVKVLKFDRERTRVSLGLKQLGEDP 266 I+ GD+I V +L DRER RV+L K+L P Sbjct: 353 ILQEGDKIKVMILSQDRERGRVTLSTKKLEPTP 385 Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 66/253 (26%), Positives = 116/253 (45%), Gaps = 7/253 (2%) Query: 269 AIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVV 328 A+ + G K++G V + D G +VEI V+E + P + + G Sbjct: 133 AVDYEFKVGDKVSGTVIEVDDDGAYVEIGAKAIAFCPVTECSFARLKT-PLEALRPGMKR 191 Query: 329 EVMVLDIDEERRRISLGLKQCKANP-WQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGI 387 + MV++ +EE ++ + L +A WQ+ + + V ++S+ G+ + G Sbjct: 192 DFMVVEDEEEYGQVIVSLAAMEATTFWQRIRQLQEEDITVTVSVESVNKGGMLVKF-GIY 250 Query: 388 DGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVAL 447 DG + +S ++ + E G E+ L+VD E ER+ K+ A +N + Sbjct: 251 DGFIPVSQFGPSITPDNM--ESLVGFELQVKFLEVDEEAERLVFSHKR-ASSTVSNDIQG 307 Query: 448 NKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTG 507 K G +V G V +V GA ++L GV G L S+ S DRV +L GD+++ Sbjct: 308 FKVGDVVAGVVQSVKPYGAFIDLG-GVTGLLHVSQISHDRVLVLDKILQEGDKIKVMILS 366 Query: 508 VDRKNRAISLSVR 520 DR+ ++LS + Sbjct: 367 QDRERGRVTLSTK 379 Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 56/205 (27%), Positives = 105/205 (51%), Gaps = 7/205 (3%) Query: 149 GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAF 208 G + +F V++ +++ V+VS A +E+ +R + L+ +E + V V+++ G Sbjct: 188 GMKRDFMVVEDEEEYGQVIVSL-AAMEATTFWQRIRQLQ--EEDITVTVSVESVNKGGML 244 Query: 209 VDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWV 268 V G DG + ++ E + VG E+ VK L+ D E R+ K+ Sbjct: 245 VKFGIYDGFIPVSQFGPSITPDNMESL-VGFELQVKFLEVDEEAERLVFSHKRASSTVSN 303 Query: 269 AIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVV 328 I + + G + G V ++ YG F+++ GV GL+HVS++ ++ + K++ GD + Sbjct: 304 DI-QGFKVGDVVAGVVQSVKPYGAFIDLG-GVTGLLHVSQISH-DRVLVLDKILQEGDKI 360 Query: 329 EVMVLDIDEERRRISLGLKQCKANP 353 +VM+L D ER R++L K+ + P Sbjct: 361 KVMILSQDRERGRVTLSTKKLEPTP 385 >UniRef50_B8HSI0 RNA binding S1 domain protein n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HSI0_CYAP4 Length = 292 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 77/249 (30%), Positives = 117/249 (46%), Gaps = 12/249 (4%) Query: 21 GSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE---IQVGDEVDVALDAVED 77 G VRG VV +D D +D G KS + +PA + G+ + + + D + +D Sbjct: 23 GQTVRGKVVNLDSDGAYIDIGGKSTAFLPAHEVLVPPGKKLADVLPLRSDRDFLIIRGQD 82 Query: 78 GFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVD 137 G+ LS ++ + W + E + + G KGG TV+ GIR F+P + V Sbjct: 83 AEGQISLSLKRLEIKALWERYQSLQESQGAIDVRVTGVNKGGLTVDAKGIRGFIPRTHVV 142 Query: 138 VRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKG 197 ++L G+ L +++ D +R +V S++ A R Q L+ G V+G Sbjct: 143 GAETLESL--VGQTLTVTILEADPERKRLVCSQKI-------ARRQQRLQEFDYGQLVQG 193 Query: 198 IVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSL 257 V+++ YG +DL GV GLLHI D + KRV V VG I V D ER R+SL Sbjct: 194 TVRDIRPYGLMIDLTGVLGLLHINDFSEKRVGSLQAHVQVGTPIKAIVTNLDAERGRISL 253 Query: 258 GLKQLGEDP 266 + L P Sbjct: 254 STRLLENRP 262 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 71/257 (27%), Positives = 122/257 (47%), Gaps = 25/257 (9%) Query: 192 GMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDR 250 G V+G V NL GA++D+GG L ++ K ++++ + + +++ Sbjct: 23 GQTVRGKVVNLDSDGAYIDIGGKSTAFLPAHEVLVPPGKKLADVLPLRSDRDFLIIRGQD 82 Query: 251 ERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTG----RVTNLTDYGCFVEIEEGVEGLV-- 304 ++SL LK+L A+ +RY + G RVT + G V+ +G+ G + Sbjct: 83 AEGQISLSLKRL---EIKALWERYQSLQESQGAIDVRVTGVNKGGLTVD-AKGIRGFIPR 138 Query: 305 -HVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNK 363 HV + T +++ VG + V +L+ D ER+R+ K + QQ + + Sbjct: 139 THVVGAE-TLESL-------VGQTLTVTILEADPERKRLVCSQKIAR---RQQRLQEFDY 187 Query: 364 GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVD 423 G V+G ++ I +G+ I L G + GL+H++D S G + G I A+V +D Sbjct: 188 GQLVQGTVRDIRPYGLMIDLTG-VLGLLHINDFSEKRVGSLQA-HVQVGTPIKAIVTNLD 245 Query: 424 AERERISLGVKQLAEDP 440 AER RISL + L P Sbjct: 246 AERGRISLSTRLLENRP 262 >UniRef50_C6LB27 Putative S1 RNA binding domain protein n=2 Tax=Clostridiales RepID=C6LB27_9FIRM Length = 354 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 69/225 (30%), Positives = 123/225 (54%), Gaps = 6/225 (2%) Query: 12 SLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQF---KNAQGELEIQVGDEV 68 SLK+I G ++ G V+ + V +D +E I E F N + E+ +GDE+ Sbjct: 70 SLKQI--HEGDVLTGTVIGVSDTEVTLDLKYYTEGVIRVEDFTDDPNFNVKEEVHIGDEI 127 Query: 69 DVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIR 128 + + G G+ +LSR++A AW L+ E + + G VK G V + GIR Sbjct: 128 SATVVRRDGGQGQIMLSRKEANDVLAWDRLKTLMEKQTIIKTKVAGVVKAGVVVYVEGIR 187 Query: 129 AFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLEN 188 F+P S + + V + GKE+E +VI ++++ +++S R ++ + E+ + N Sbjct: 188 GFVPASKLSLNYVENLEEWLGKEVELRVIDVNEEDKKLILSAREILREREAEEKKARISN 247 Query: 189 LQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPS 232 ++ G+ +G V++L YGAF++LG G+ GL+H++ ++ KR+K PS Sbjct: 248 VEVGLVTEGTVESLQPYGAFINLGNGLSGLVHVSQISEKRIKSPS 292 >UniRef50_C5ES10 RNA binding S1 domain-containing protein n=2 Tax=Clostridiales RepID=C5ES10_9FIRM Length = 258 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 59/182 (32%), Positives = 96/182 (52%), Gaps = 3/182 (1%) Query: 84 LSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRD 143 L+ E++ W + ED V I+ VKGG L +RAF+P S + V Sbjct: 47 LAEEESGEGAKWAQFAQMMEDKTVVKVKISEAVKGGVVTSLEEVRAFIPASQLSTEYVEK 106 Query: 144 TLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLT 203 +GK +E +I +D ++ +V+S R V + AE+ + + G V+G V ++ Sbjct: 107 LEDWQGKYVECVIITVDPEKKRLVLSGREVERGKKEAEKQARMAQFKAGDVVEGTVDSIK 166 Query: 204 DYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQL 262 YGAF+ L GVDGLLHI+ ++ +R+KHP ++ G + VK+L D ++SL ++ L Sbjct: 167 PYGAFIKLDEGVDGLLHISQISTQRIKHPGAVLTEGQTVKVKILSTD--NGKLSLSMRAL 224 Query: 263 GE 264 E Sbjct: 225 AE 226 Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 61/119 (51%), Gaps = 9/119 (7%) Query: 325 GDVVEVMVLDIDEERRRISLGLKQC----KANPWQQFAETHNKGDRVEGKIKSITDFGIF 380 G VE +++ +D E++R+ L ++ K Q GD VEG + SI +G F Sbjct: 112 GKYVECVIITVDPEKKRLVLSGREVERGKKEAEKQARMAQFKAGDVVEGTVDSIKPYGAF 171 Query: 381 IGLDGGIDGLVHLSDISWN-VAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAE 438 I LD G+DGL+H+S IS + AV +G + +L D ++SL ++ LAE Sbjct: 172 IKLDEGVDGLLHISQISTQRIKHPGAV--LTEGQTVKVKILSTD--NGKLSLSMRALAE 226 >UniRef50_O33698 30S ribosomal protein S1 n=12 Tax=Cyanobacteria RepID=RS1_SYNE7 Length = 295 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 73/256 (28%), Positives = 123/256 (48%), Gaps = 12/256 (4%) Query: 14 KEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPA-EQFKNAQGELEIQVGDEVDVAL 72 + ++++ G +VRG V D +D G K+ + +P E +A +LE + + ++ Sbjct: 21 QSLDSQKGQLVRGKVCEYSTDGAYIDIGGKAPAFLPKREAALHAVLDLEAHLPKDEELEF 80 Query: 73 DAVEDGF--GETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAF 130 + D G+ +S +AW + + E +TV + G KGG T +L G+RAF Sbjct: 81 LVIRDQNEDGQVTVSLRALALEQAWTRVAELQEGGQTVQVKVTGSNKGGVTADLEGLRAF 140 Query: 131 LPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQ 190 +P S ++ + D+L +GK L +++++ +V+S R A R L+ ++ Sbjct: 141 IPRSHLNEKEDLDSL--KGKTLTVAFLEVNRADKKLVLSER-------QAARTALVREIE 191 Query: 191 EGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDR 250 G + G V L +G FVDLGG LL I ++ K V I +GD I V+ D Sbjct: 192 VGQLINGKVTGLKPFGVFVDLGGATALLPINQISQKFVADVGAIFKIGDPIQALVVAIDN 251 Query: 251 ERTRVSLGLKQLGEDP 266 + R+SL K L P Sbjct: 252 TKGRISLSTKVLENHP 267 Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 65/254 (25%), Positives = 117/254 (46%), Gaps = 15/254 (5%) Query: 190 QEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKF 248 Q+G V+G V + GA++D+GG L + A V + +E+ V++ Sbjct: 26 QKGQLVRGKVCEYSTDGAYIDIGGKAPAFLPKREAALHAVLDLEAHLPKDEELEFLVIRD 85 Query: 249 DRERTRVSLGLKQLG-EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVS 307 E +V++ L+ L E W +A+ G + +VT G ++E G+ + S Sbjct: 86 QNEDGQVTVSLRALALEQAWTRVAELQEGGQTVQVKVTGSNKGGVTADLE-GLRAFIPRS 144 Query: 308 EMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRV 367 ++ +++ K G + V L+++ +++ L +Q + E G + Sbjct: 145 HLN-EKEDLDSLK----GKTLTVAFLEVNRADKKLVLSERQAARTALVREIEV---GQLI 196 Query: 368 EGKIKSITDFGIFIGLDGGIDGLVHLSDISWN-VAGEEAVREYKKGDEIAAVVLQVDAER 426 GK+ + FG+F+ L GG L+ ++ IS VA A+ +K GD I A+V+ +D + Sbjct: 197 NGKVTGLKPFGVFVDL-GGATALLPINQISQKFVADVGAI--FKIGDPIQALVVAIDNTK 253 Query: 427 ERISLGVKQLAEDP 440 RISL K L P Sbjct: 254 GRISLSTKVLENHP 267 >UniRef50_A2R624 Function: RRP5 is required for formation of both 18S and 5. 8S rRNA in yeast n=24 Tax=Leotiomyceta RepID=A2R624_ASPNC Length = 1822 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 97/358 (27%), Positives = 170/358 (47%), Gaps = 33/358 (9%) Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMA--WKRVKHPSEIVNVGDEIT 242 LE +Q G G V N+ D +++L V G L + D + + + VG + Sbjct: 1054 LEQVQVGSTWVGFVNNVADDCLWINLSPNVRGRLRLMDASDDLSLLADVEKHYPVGSAMK 1113 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 V V D ++ R+ L KQ + + + G L GRVT +T+ +++ + + G Sbjct: 1114 VHVSAVDADKGRLDLSAKQRSDK---LVFEDVSVGMILPGRVTKVTERQVIMQLSKSIVG 1170 Query: 303 LVHVSEM--DWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCK----ANPWQQ 356 V + +M D+T N V +V+ V+ ID+ ++ISL L+ K + P Q Sbjct: 1171 AVDLIDMADDYTKAN---PTVCQKNEVLRACVIAIDKANKKISLSLRPSKVLSSSLPVQD 1227 Query: 357 FAETHNK----GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKG 412 T K D V G ++ + D G+F+ + + V +SD+S + ++E+K Sbjct: 1228 KEITSIKQLKVNDIVRGFVRRVADNGLFVTVGRDVTAYVRISDLS-----DSYLKEWKDS 1282 Query: 413 DEIAAVV----LQVDAERERISLGVKQLAEDP-FNNWVALN--KKGAIVTGKVTAVDAKG 465 ++ +V D+E+ ++ + +K+ DP + + L+ K G +VTGKV V+ G Sbjct: 1283 FQVDQLVKGRVTVSDSEQGKLQMSLKESVLDPNYKAPLTLHDLKPGQVVTGKVRKVEEFG 1342 Query: 466 ATVEL--ADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRA 521 A + + + + G SE + +RVEDA + GD V+AK +DRK IS ++A Sbjct: 1343 AFIVIDGSKNISGLCHRSEMAENRVEDARTLYEEGDAVKAKILKIDRKQEKISFGLKA 1400 Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 88/384 (22%), Positives = 155/384 (40%), Gaps = 52/384 (13%) Query: 186 LENLQEGMEVKGIVKNLTDYGAFVD-LGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 +E+L+EG +V G ++N+T G FV+ LGGV GL+ + + V P + G +T Sbjct: 834 IEDLKEGADVTGFIRNITMNGVFVEFLGGVIGLVPKRLVGDENVNKPDYGMARGQVVTAT 893 Query: 245 VLKFDRERTR--VSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYG----------- 291 V D + R +S+ + A PE T V N D G Sbjct: 894 VHSVDADFQRFILSMNPAEATHAGAKKKAAAKPEPTPTDDAVANAIDEGIKSMSDFTFGR 953 Query: 292 ---C----------FVEIEEGVEGLVHVSEM--DWTN--KNIHPSKVVNVGDVVEVMVLD 334 C V++ + ++G + VSE+ W + P + ++ +L Sbjct: 954 VTKCKIVSVRATQVNVQLADNIQGRIDVSEVFDKWEDIKDRKQPLRFFRPKQIISARILG 1013 Query: 335 IDEERRRISLGLKQCK-----------------ANPWQQFAETHNKGDRVEGKIKSITDF 377 I + R L + ANP E G G + ++ D Sbjct: 1014 IHDARNHKFLPISHRSGKFPVFELSVKPSFLQAANPSPLNLEQVQVGSTWVGFVNNVADD 1073 Query: 378 GIFIGLDGGIDGLVHLSDISWNVAGEEAV-REYKKGDEIAAVVLQVDAERERISLGVKQL 436 ++I L + G + L D S +++ V + Y G + V VDA++ R+ L KQ Sbjct: 1074 CLWINLSPNVRGRLRLMDASDDLSLLADVEKHYPVGSAMKVHVSAVDADKGRLDLSAKQR 1133 Query: 437 AEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLS 496 ++ V++ G I+ G+VT V + ++L+ + G + + + D + V Sbjct: 1134 SDKLVFEDVSV---GMILPGRVTKVTERQVIMQLSKSIVGAVDLIDMADDYTKANPTVCQ 1190 Query: 497 VGDEVEAKFTGVDRKNRAISLSVR 520 + + A +D+ N+ ISLS+R Sbjct: 1191 KNEVLRACVIAIDKANKKISLSLR 1214 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 76/327 (23%), Positives = 139/327 (42%), Gaps = 27/327 (8%) Query: 213 GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAK 272 G+ GL+ A ++ P + + G ++ ++L + E+ ++ L LK+ + AI K Sbjct: 589 GITGLVPSMHFADTPLQFPEKKFHEGMTVSTRILSVNLEKRQIRLTLKKSLLNSESAIWK 648 Query: 273 RYPE---GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVE 329 Y E GT+ G + + +G V+ + G + VSEM PS+ +G VV Sbjct: 649 DYEEITPGTQSPGTIIKIQPHGAVVQFYGPIRGFLPVSEMSEAYIK-DPSQHFRLGQVVN 707 Query: 330 VMVLDIDEERRRISLGLK--QCKANPWQQFAETHNKGDRVEGKI--KS-------ITDFG 378 V L +D R ++++ K + +++ E + G V G + KS + D+G Sbjct: 708 VHALSVDASREKLAVSCKDPETFTEAYRKAFENIHPGMLVSGTVFEKSADDTLLKLDDYG 767 Query: 379 IFIGLDGGIDGLVHLSD--ISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQL 436 + L+ + H++D S + +R +K +E+ + +Q A R G + L Sbjct: 768 LVARLN-----VEHVADGSPSKQASTLSKIRVGQKLNELMVIDIQ-RAHRLIKVTGRQSL 821 Query: 437 AEDPFNNWVALN----KKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDAT 492 + + + K+GA VTG + + G VE GV G + + V Sbjct: 822 KKAAKHGSIPSEIEDLKEGADVTGFIRNITMNGVFVEFLGGVIGLVPKRLVGDENVNKPD 881 Query: 493 LVLSVGDEVEAKFTGVDRKNRAISLSV 519 ++ G V A VD + LS+ Sbjct: 882 YGMARGQVVTATVHSVDADFQRFILSM 908 Score = 52.0 bits (123), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 50/193 (25%), Positives = 85/193 (44%), Gaps = 19/193 (9%) Query: 291 GCFVEIEEGVEGLVHVSEMDWTNKNIH-PSKVVNVGDVVEVMVLDIDEERRRISLGLKQC 349 G V + +G+ GLV M + + + P K + G V +L ++ E+R+I L LK+ Sbjct: 581 GLIVALADGITGLV--PSMHFADTPLQFPEKKFHEGMTVSTRILSVNLEKRQIRLTLKKS 638 Query: 350 KANP----WQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEA 405 N W+ + E G + G I I G + G I G + +S++S + + Sbjct: 639 LLNSESAIWKDYEEI-TPGTQSPGTIIKIQPHGAVVQFYGPIRGFLPVSEMSEAYIKDPS 697 Query: 406 VREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNK------KGAIVTGKVT 459 + ++ G + L VDA RE++++ K DP A K G +V+G V Sbjct: 698 -QHFRLGQVVNVHALSVDASREKLAVSCK----DPETFTEAYRKAFENIHPGMLVSGTVF 752 Query: 460 AVDAKGATVELAD 472 A ++L D Sbjct: 753 EKSADDTLLKLDD 765 >UniRef50_C1N2E8 Elongation factor Ts n=2 Tax=cellular organisms RepID=C1N2E8_9CHLO Length = 844 Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 58/182 (31%), Positives = 96/182 (52%), Gaps = 30/182 (16%) Query: 192 GMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDR 250 G E KG+VK + +YG FVD G DGL+HI+++ V++ +++V+ E+ V + D Sbjct: 71 GAEFKGVVKRVQEYGCFVDFGAKSDGLVHISELKDGFVENVADVVSENQEVQVFIKSIDA 130 Query: 251 ERTRVSLGLK----------------------------QLGEDPWVAIAKRYPEGTKLTG 282 E+ R+SL +K + + + + +GT + G Sbjct: 131 EKGRISLTMKPPPSAAELETILAKEAEREAKFQERKAKKAASEESMKAVRAIKKGTTVEG 190 Query: 283 RVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRI 342 V ++ +G FVEI EGVEGLVHV+EM + N+ P V VG+ V+V VL +D ++ ++ Sbjct: 191 VVKSIQAFGAFVEIAEGVEGLVHVTEMS-EDYNVKPEDFVTVGETVKVRVLGVDGQKVKL 249 Query: 343 SL 344 S+ Sbjct: 250 SM 251 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 58/186 (31%), Positives = 93/186 (50%), Gaps = 36/186 (19%) Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEM-DWTNKNIHPSKVVNVGDVVEVMVLDI 335 G + G V + +YGCFV+ +GLVH+SE+ D +N+ + VV+ V+V + I Sbjct: 71 GAEFKGVVKRVQEYGCFVDFGAKSDGLVHISELKDGFVENV--ADVVSENQEVQVFIKSI 128 Query: 336 DEERRRISLGLKQC------------KANPWQQFAETH----------------NKGDRV 367 D E+ RISL +K +A +F E KG V Sbjct: 129 DAEKGRISLTMKPPPSAAELETILAKEAEREAKFQERKAKKAASEESMKAVRAIKKGTTV 188 Query: 368 EGKIKSITDFGIFIGLDGGIDGLVHLSDIS--WNVAGEEAVREYKKGDEIAAVVLQVDAE 425 EG +KSI FG F+ + G++GLVH++++S +NV E+ V G+ + VL VD + Sbjct: 189 EGVVKSIQAFGAFVEIAEGVEGLVHVTEMSEDYNVKPEDFV---TVGETVKVRVLGVDGQ 245 Query: 426 RERISL 431 + ++S+ Sbjct: 246 KVKLSM 251 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 61/222 (27%), Positives = 101/222 (45%), Gaps = 45/222 (20%) Query: 364 GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDIS----WNVAGEEAVREYKKGDEIAAVV 419 G +G +K + ++G F+ DGLVH+S++ NVA + V E + E+ + Sbjct: 71 GAEFKGVVKRVQEYGCFVDFGAKSDGLVHISELKDGFVENVA--DVVSENQ---EVQVFI 125 Query: 420 LQVDAERERISLGVK----------------------------QLAEDPFNNWVALNKKG 451 +DAE+ RISL +K + A + V KKG Sbjct: 126 KSIDAEKGRISLTMKPPPSAAELETILAKEAEREAKFQERKAKKAASEESMKAVRAIKKG 185 Query: 452 AIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRK 511 V G V ++ A GA VE+A+GVEG + +E S D ++VG+ V+ + GVD + Sbjct: 186 TTVEGVVKSIQAFGAFVEIAEGVEGLVHVTEMSEDYNVKPEDFVTVGETVKVRVLGVDGQ 245 Query: 512 NRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKA 553 +S+ K++ D K+ + + + A +M AFK+ Sbjct: 246 KVKLSM----KEKMDLKEMLEGIQTESSA----GSMEYAFKS 279 Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 53/80 (66%), Gaps = 1/80 (1%) Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNV 237 S E + + +++G V+G+VK++ +GAFV++ GV+GL+H+T+M+ P + V V Sbjct: 172 SEESMKAVRAIKKGTTVEGVVKSIQAFGAFVEIAEGVEGLVHVTEMSEDYNVKPEDFVTV 231 Query: 238 GDEITVKVLKFDRERTRVSL 257 G+ + V+VL D ++ ++S+ Sbjct: 232 GETVKVRVLGVDGQKVKLSM 251 >UniRef50_A8J2S3 RNA binding protein n=1 Tax=Chlamydomonas reinhardtii RepID=A8J2S3_CHLRE Length = 360 Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 59/187 (31%), Positives = 99/187 (52%), Gaps = 15/187 (8%) Query: 88 KAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVR----- 142 +A EA+I + E ETV I G+ +GG V+ +R F+P + +D +R Sbjct: 74 QAAISEAYIKAASSKERGETVEVKIVGQNEGGVMVQFGPLRGFMPYNKLDPARLRACANG 133 Query: 143 DTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNL 202 D L G++++ ++I D R +V+S R V +E L + EG ++G+V + Sbjct: 134 DLTKLIGQQIKARIITADIARKELVLSERQVAAAEA-------LGRVSEGDVIEGVVTGV 186 Query: 203 TDYGAFVDLGGVD---GLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGL 259 DYGAF+ + G+ GL+H +++ W R+ E++ +G E+ KVL D R++L + Sbjct: 187 EDYGAFIQIKGLPDVFGLVHKSEVTWARILTVDEVLKLGQEVRAKVLSVDVANCRLALSI 246 Query: 260 KQLGEDP 266 KQL DP Sbjct: 247 KQLTTDP 253 Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 51/189 (26%), Positives = 90/189 (47%), Gaps = 18/189 (9%) Query: 172 AVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHP 231 A I++ +S ER E +EVK + +N + G V G + G + + R++ Sbjct: 80 AYIKAASSKERG-------ETVEVKIVGQN--EGGVMVQFGPLRGFMPYNKLDPARLRAC 130 Query: 232 SE---IVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLT 288 + +G +I +++ D R + L +Q+ + R EG + G VT + Sbjct: 131 ANGDLTKLIGQQIKARIITADIARKELVLSERQVAAAEALG---RVSEGDVIEGVVTGVE 187 Query: 289 DYGCFVEIE--EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGL 346 DYG F++I+ V GLVH SE+ W + + +V+ +G V VL +D R++L + Sbjct: 188 DYGAFIQIKGLPDVFGLVHKSEVTWA-RILTVDEVLKLGQEVRAKVLSVDVANCRLALSI 246 Query: 347 KQCKANPWQ 355 KQ +P + Sbjct: 247 KQLTTDPLR 255 Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 42/125 (33%), Positives = 63/125 (50%), Gaps = 14/125 (11%) Query: 324 VGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNK---GDRVEGKIKSITDFGIF 380 +G ++ ++ D R+ + L +Q A AE + GD +EG + + D+G F Sbjct: 139 IGQQIKARIITADIARKELVLSERQVAA------AEALGRVSEGDVIEGVVTGVEDYGAF 192 Query: 381 IGLDGGID--GLVHLSDISWNVAGEEAVRE-YKKGDEIAAVVLQVDAERERISLGVKQLA 437 I + G D GLVH S+++W A V E K G E+ A VL VD R++L +KQL Sbjct: 193 IQIKGLPDVFGLVHKSEVTW--ARILTVDEVLKLGQEVRAKVLSVDVANCRLALSIKQLT 250 Query: 438 EDPFN 442 DP Sbjct: 251 TDPLR 255 >UniRef50_Q14690 Protein RRP5 homolog n=24 Tax=Metazoa RepID=RRP5_HUMAN Length = 1871 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 95/377 (25%), Positives = 166/377 (44%), Gaps = 34/377 (9%) Query: 170 RRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG----GVDGLLHITDMAW 225 R ++IE++ D ++ G VKG V + YG V +G G+ +H+ D+ Sbjct: 436 RTSIIEAQYLRYHD-----IEPGAVVKGTVLTIKSYGMLVKVGEQMRGLVPPMHLADIL- 489 Query: 226 KRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQL---GEDPWVAIAKRYPEGTKLTG 282 +K+P + ++GDE+ +VL D E ++ + LK+ + P + G + G Sbjct: 490 --MKNPEKKYHIGDEVKCRVLLCDPEAKKLMMTLKKTLIESKLPVITCYADAKPGLQTHG 547 Query: 283 RVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRI 342 + + DYGC V+ V+GLV E+ T P +V G VV+V+VL+ + + R+ Sbjct: 548 FIIRVKDYGCIVKFYNNVQGLVPKHELS-TEYIPDPERVFYTGQVVKVVVLNCEPSKERM 606 Query: 343 SLGLK-----QCKANPW---QQFAETHNKGDRVEGKIKSITDFGIFIG-LDGGIDGLVHL 393 L K + K P Q+ + N G V+ K+ T G+ + L I + Sbjct: 607 LLSFKLSSDPEPKKEPAGHSQKKGKAINIGQLVDVKVLEKTKDGLEVAVLPHNIRAFLPT 666 Query: 394 SDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQL-------AEDPFNNWVA 446 S +S +VA + + + +I VL + R+ L K +DP N+ Sbjct: 667 SHLSDHVANGPLLHHWLQAGDILHRVLCLSQSEGRVLLCRKPALVSTVEGGQDP-KNFSE 725 Query: 447 LNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFT 506 ++ G ++ G V ++ G ++ G+ G + S V + G V AK T Sbjct: 726 IH-PGMLLIGFVKSIKDYGVFIQFPSGLSGLAPKAIMSDKFVTSTSDHFVEGQTVAAKVT 784 Query: 507 GVDRKNRAISLSVRAKD 523 VD + + + LS+R D Sbjct: 785 NVDEEKQRMLLSLRLSD 801 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 83/375 (22%), Positives = 156/375 (41%), Gaps = 57/375 (15%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQGELEIQVGDE 67 + L+ + PG++V+G V+ I +LV G + +P + E + +GDE Sbjct: 443 QYLRYHDIEPGAVVKGTVLTIKSYGMLVKVGEQMRGLVPPMHLADILMKNPEKKYHIGDE 502 Query: 68 VDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDA----ETVTGVINGKVKGGFTVE 123 V + + D + L+ K E+ + + Y DA +T +I K G Sbjct: 503 VKCRV-LLCDPEAKKLMMTLKKTLIESKLPVITCYADAKPGLQTHGFIIRVKDYGCIVKF 561 Query: 124 LNGIRAFLPGSLVDVRPVRDT--LHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 N ++ +P + + D + G+ ++ V+ + + +++S + + E E Sbjct: 562 YNNVQGLVPKHELSTEYIPDPERVFYTGQVVKVVVLNCEPSKERMLLSFKLSSDPEPKKE 621 Query: 182 RD------------------QLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITD- 222 ++LE ++G+EV + N+ AF+ H++D Sbjct: 622 PAGHSQKKGKAINIGQLVDVKVLEKTKDGLEVAVLPHNIR---AFLPTS------HLSDH 672 Query: 223 MAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQL-------GEDPWVAIAKRYP 275 +A + H + GD I +VL + RV L K G+DP ++ +P Sbjct: 673 VANGPLLH--HWLQAGD-ILHRVLCLSQSEGRVLLCRKPALVSTVEGGQDPK-NFSEIHP 728 Query: 276 EGTKLTGRVTNLTDYGCFVEIEEGVEGLVH---VSEMDWTNKNIHPSKVVNVGDVVEVMV 332 G L G V ++ DYG F++ G+ GL +S+ T+ + H G V V Sbjct: 729 -GMLLIGFVKSIKDYGVFIQFPSGLSGLAPKAIMSDKFVTSTSDH----FVEGQTVAAKV 783 Query: 333 LDIDEERRRISLGLK 347 ++DEE++R+ L L+ Sbjct: 784 TNVDEEKQRMLLSLR 798 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 81/345 (23%), Positives = 142/345 (41%), Gaps = 45/345 (13%) Query: 176 SENSAERDQLL--ENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMA-------- 224 S+++ E+ ++L E+L EGM + G VK + + + L G+ G + +T++ Sbjct: 65 SKSAREKFEILSVESLCEGMRILGCVKEVNELELVISLPNGLQGFVQVTEICDAYTKKLN 124 Query: 225 --------WKRVKHPSEIVNVGDEITVKVLKF---DRERTRVSLGLKQLGEDPWVAIAKR 273 K + H E+ + G + V DR + V L L + V A+ Sbjct: 125 EQVTQEQPLKDLLHLPELFSPGMLVRCVVSSLGITDRGKKSVKLSLNPKNVN-RVLSAEA 183 Query: 274 YPEGTKLTGRVTNLTDYGCFVEIEEGVEG----LVHVSEMDWTNKNIHPSKVVNVGDVVE 329 G LTG V++L D+G V+I GV+G L + ++ + +K + VG + Sbjct: 184 LKPGMLLTGTVSSLEDHGYLVDI--GVDGTRAFLPLLKAQEYIRQKNKGAK-LKVGQYLN 240 Query: 330 VMVLDIDEERRRISLGLKQCKANPW----QQFAETHN--KGDRVEGKIKSITDFGIFIGL 383 +V + +SL + + + QQ +N G V+ +++ +T FG+ + Sbjct: 241 CIVEKVKGNGGVVSLSVGHSEVSTAIATEQQSWNLNNLLPGLVVKAQVQKVTPFGLTLNF 300 Query: 384 DGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNN 443 G+V + AG Y + A +L V + L ++ + P Sbjct: 301 LTFFTGVVDFMHLDPKKAG-----TYFSNQAVRACILCVHPRTRVVHLSLRPIFLQPGRP 355 Query: 444 WVALNKK--GAIVTG-KVTAVDAK-GATVELADGVEGYLRASEAS 484 L+ + GA++ V K GAT L DGV Y R S S Sbjct: 356 LTRLSCQNLGAVLDDVPVQGFFKKAGATFRLKDGVLAYARLSHLS 400 >UniRef50_A9SNI7 Predicted protein n=3 Tax=Embryophyta RepID=A9SNI7_PHYPA Length = 299 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 57/193 (29%), Positives = 104/193 (53%), Gaps = 24/193 (12%) Query: 90 KRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDV-RPVRDTLH-- 146 +R+ AW ++ E GV++ GG V ++ FLP S +D R +RD+ Sbjct: 2 QRNAAWQKAQETMESGSIHRGVVDACNSGGLVVLFGPLQGFLPFSQMDQGRLLRDSSRSL 61 Query: 147 ------LEGKELEFKVIKLDQKRNNVVVS-RRAVIESENSAERDQLLENLQEGMEVKGIV 199 L G + K+I+ ++ ++ S ++AV+E+ L L+EG+ +G V Sbjct: 62 SEFAEELVGDFISVKIIEANETTRRLIFSEKQAVLEAN--------LRLLEEGLVYEGKV 113 Query: 200 KNLTDYGAFVDL------GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERT 253 ++TD+GAFVD+ V GL+ ++++W V++P +I +G + VK+L+ D+E++ Sbjct: 114 NSVTDFGAFVDVVLPDGTSSVRGLVRTSELSWNPVRNPRDICEIGQSVRVKILQLDKEKS 173 Query: 254 RVSLGLKQLGEDP 266 + L +KQL +DP Sbjct: 174 HLYLSIKQLQDDP 186 Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 51/179 (28%), Positives = 85/179 (47%), Gaps = 16/179 (8%) Query: 187 ENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRV-----KHPSEIVN--VGD 239 E ++ G +G+V G V G + G L + M R+ + SE VGD Sbjct: 12 ETMESGSIHRGVVDACNSGGLVVLFGPLQGFLPFSQMDQGRLLRDSSRSLSEFAEELVGD 71 Query: 240 EITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI--- 296 I+VK+++ + R+ KQ + A + EG G+V ++TD+G FV++ Sbjct: 72 FISVKIIEANETTRRLIFSEKQAVLE---ANLRLLEEGLVYEGKVNSVTDFGAFVDVVLP 128 Query: 297 --EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP 353 V GLV SE+ W N +P + +G V V +L +D+E+ + L +KQ + +P Sbjct: 129 DGTSSVRGLVRTSELSW-NPVRNPRDICEIGQSVRVKILQLDKEKSHLYLSIKQLQDDP 186 Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 17/169 (10%) Query: 284 VTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVN------VGDVVEVMVLDIDE 337 V + + G V + ++G + S+MD S+ ++ VGD + V +++ +E Sbjct: 23 VVDACNSGGLVVLFGPLQGFLPFSQMDQGRLLRDSSRSLSEFAEELVGDFISVKIIEANE 82 Query: 338 ERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGL---DG--GIDGLVH 392 RR+ KQ + E +G EGK+ S+TDFG F+ + DG + GLV Sbjct: 83 TTRRLIFSEKQAVLEANLRLLE---EGLVYEGKVNSVTDFGAFVDVVLPDGTSSVRGLVR 139 Query: 393 LSDISWN-VAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDP 440 S++SWN V + E G + +LQ+D E+ + L +KQL +DP Sbjct: 140 TSELSWNPVRNPRDICEI--GQSVRVKILQLDKEKSHLYLSIKQLQDDP 186 >UniRef50_C0DB62 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0DB62_9CLOT Length = 259 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 67/229 (29%), Positives = 116/229 (50%), Gaps = 21/229 (9%) Query: 50 AEQFKNAQGELEIQVGDEVDVALDAVE---------DGFGETL------LSREKAKRHEA 94 +E+ KN E+E++ + V+ A + VE + +TL +S +++ E Sbjct: 2 SEEMKN---EMELENAEAVETAAEPVETMEDYAAELEASYKTLNKRNIEISEDESGVLEK 58 Query: 95 WITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEF 154 W + E+ + I VK G ++ +RAF+P S + V +GK ++ Sbjct: 59 WAHFTQMLEERTVFSVKIAEAVKAGVVAYVDDVRAFIPASQLSTEYVEKLEDWQGKNIDV 118 Query: 155 KVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-G 213 VI D ++ +V+S R V + AER + L + G V+G V +L +YGAF+ L G Sbjct: 119 IVITADTEKKRLVLSGREVEKERKEAERKEKLAQFKAGDVVEGTVDSLKNYGAFIKLADG 178 Query: 214 VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQL 262 VDGLLH++ ++ +R+KHP ++ G + VK+L ++SL +K L Sbjct: 179 VDGLLHVSQISTQRIKHPGVVLKEGQSVKVKILSV--ADGKISLSMKAL 225 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 18/93 (19%) Query: 310 DWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCK-----ANPWQQFAETHNKG 364 DW KNI +V+V+ D E++R+ L ++ + A ++ A+ G Sbjct: 110 DWQGKNI------------DVIVITADTEKKRLVLSGREVEKERKEAERKEKLAQ-FKAG 156 Query: 365 DRVEGKIKSITDFGIFIGLDGGIDGLVHLSDIS 397 D VEG + S+ ++G FI L G+DGL+H+S IS Sbjct: 157 DVVEGTVDSLKNYGAFIKLADGVDGLLHVSQIS 189 Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 38/115 (33%), Positives = 60/115 (52%), Gaps = 6/115 (5%) Query: 411 KGDEIAAVVLQVDAERERISLG----VKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGA 466 +G I +V+ D E++R+ L K+ E +A K G +V G V ++ GA Sbjct: 112 QGKNIDVIVITADTEKKRLVLSGREVEKERKEAERKEKLAQFKAGDVVEGTVDSLKNYGA 171 Query: 467 TVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRA 521 ++LADGV+G L S+ S R++ +VL G V+ K V + ISLS++A Sbjct: 172 FIKLADGVDGLLHVSQISTQRIKHPGVVLKEGQSVKVKILSV--ADGKISLSMKA 224 >UniRef50_A7SBJ3 Predicted protein n=2 Tax=Nematostella vectensis RepID=A7SBJ3_NEMVE Length = 1771 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 86/353 (24%), Positives = 157/353 (44%), Gaps = 66/353 (18%) Query: 187 ENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGL---LHITDMAWKRVKHPSEIVNVGDEIT 242 E+++ G V+G + L +G V + + GL +H+ D+ +KHP + + G + Sbjct: 472 EDIKPGSIVEGTIITLEKFGMLVSVSDHIKGLVTNMHLADII---LKHPEKKLTEGKVVK 528 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPE---GTKLTGRVTNLTDYGCFVEIEEG 299 +VL D + R+ L K+ + + +Y + GT G +T++ +YGC V Sbjct: 529 CRVLTVDPGQRRLHLTHKKTMVSSTLQVITQYSDAKPGTTSHGFITSVREYGCLVTFYNN 588 Query: 300 VEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQ---- 355 V+GLV ++ ++ P V +G V+ V+ + +++++ L LK AN Sbjct: 589 VKGLVPKDQLG-IQESEDPRGVFYLGQVLTCHVISCNPDQQKLKLSLKANSANKSSTQVS 647 Query: 356 -QFAETHNK-----------------GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDIS 397 Q A T K G + G +K + +G+F+ GI GL S I+ Sbjct: 648 LQTASTSLKNAAESKTMVTNFSDIKPGMVLPGFVKLLMGYGVFVEFAPGILGLAPNSFIA 707 Query: 398 WNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVA----------L 447 N +A +K G + A V +VDAER+R + +KQ +P ++W + L Sbjct: 708 -NHFVSDAASHFKIGQTLVAQVNEVDAERQRFLVSLKQSDLNPGSDWTSATAGALLEEIL 766 Query: 448 NKK----------------------GAIVTGKVTAVDAKGATVELADGVEGYL 478 +++ G+ + GKV+ V G ++ L DG++G++ Sbjct: 767 SERKHILDELASKTEDVKNLLSLPVGSCIEGKVSKVKKNGISLTLPDGLKGFV 819 Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 57/239 (23%), Positives = 101/239 (42%), Gaps = 15/239 (6%) Query: 291 GCFVEIEEGVEGLVHVSEMDWTNKNIHP-SKVVNVGDVVEVMVLDIDEERRRISLGLKQC 349 G +++G+ G VH S++ ++K I K G + VL ++ +SL K+ Sbjct: 405 GLLANVKDGLNGFVHFSQV--SDKQIEKLGKKYKAGTSHKCRVLGMNTIDGLLSLTTKKS 462 Query: 350 KAN-PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLV---HLSDISWNVAGEEA 405 N P+ ++ E G VEG I ++ FG+ + + I GLV HL+DI + Sbjct: 463 IINKPFMRY-EDIKPGSIVEGTIITLEKFGMLVSVSDHIKGLVTNMHLADIIL----KHP 517 Query: 406 VREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALN---KKGAIVTGKVTAVD 462 ++ +G + VL VD + R+ L K+ + K G G +T+V Sbjct: 518 EKKLTEGKVVKCRVLTVDPGQRRLHLTHKKTMVSSTLQVITQYSDAKPGTTSHGFITSVR 577 Query: 463 AKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRA 521 G V + V+G + + ED V +G + + + + LS++A Sbjct: 578 EYGCLVTFYNNVKGLVPKDQLGIQESEDPRGVFYLGQVLTCHVISCNPDQQKLKLSLKA 636 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 88/396 (22%), Positives = 159/396 (40%), Gaps = 85/396 (21%) Query: 19 RPGSIVRGVVVAIDKDVVLVDA-----GLKSESAIPAEQFKNAQGELEIQVGDEVDVALD 73 +PGSIV G ++ ++K +LV GL + + K+ + +L G V + Sbjct: 475 KPGSIVEGTIITLEKFGMLVSVSDHIKGLVTNMHLADIILKHPEKKL--TEGKVVKCRVL 532 Query: 74 AVEDGFGETLLSREKAKRHEAWITLEKAYEDAE---TVTGVINGKVKGGFTVEL-NGIRA 129 V+ G L+ +K + + Y DA+ T G I + G V N ++ Sbjct: 533 TVDPGQRRLHLTHKKTMVSSTLQVITQ-YSDAKPGTTSHGFITSVREYGCLVTFYNNVKG 591 Query: 130 FLPGSLVDVRPVRD-----------TLHLEGKELEFKVIKLDQKRNNV------VVSRRA 172 +P + ++ D T H+ + + +KL K N+ V + A Sbjct: 592 LVPKDQLGIQESEDPRGVFYLGQVLTCHVISCNPDQQKLKLSLKANSANKSSTQVSLQTA 651 Query: 173 VIESENSAERDQLLEN---LQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRV 228 +N+AE ++ N ++ GM + G VK L YG FV+ G+ GL + +A V Sbjct: 652 STSLKNAAESKTMVTNFSDIKPGMVLPGFVKLLMGYGVFVEFAPGILGLAPNSFIANHFV 711 Query: 229 KHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDP---WVA----------IAKR-- 273 + +G + +V + D ER R + LKQ +P W + +++R Sbjct: 712 SDAASHFKIGQTLVAQVNEVDAERQRFLVSLKQSDLNPGSDWTSATAGALLEEILSERKH 771 Query: 274 -----------------YPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVH------VSEMD 310 P G+ + G+V+ + G + + +G++G V VS ++ Sbjct: 772 ILDELASKTEDVKNLLSLPVGSCIEGKVSKVKKNGISLTLPDGLKGFVFHQLAQGVSCLE 831 Query: 311 WTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGL 346 G+VV+ VLD+D ++ + L L Sbjct: 832 --------------GEVVQGCVLDLDVKKSVVELTL 853 >UniRef50_C1E1D5 Predicted protein n=3 Tax=Mamiellales RepID=C1E1D5_9CHLO Length = 294 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 75/238 (31%), Positives = 119/238 (50%), Gaps = 42/238 (17%) Query: 100 KAYEDAETVTGVINGKVKGGFTVEL-NG-IRAFLPGS------LVDVRPVRDTLHLE--- 148 +A E E V+G + +GG + + NG RAFLP S +DV+ R + Sbjct: 2 RALEKGEPVSGRVEVANRGGLILRIFNGRFRAFLPLSQMTSSRTLDVKRSRKKNAPKSAQ 61 Query: 149 -GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGA 207 GK +E KV ++ K+ +VVS RA+++ ++ L+ G+ V +L+D+GA Sbjct: 62 VGKVIEVKVTDVNDKK--IVVSERALVQERG-------VKRLKPGVRASAQVVSLSDFGA 112 Query: 208 FVDLGG-------VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKF----DRERTRVS 256 FV+L ++GL+HI++++W RV HP +I+ VGDE+ VKVL R RV+ Sbjct: 113 FVELSQDDPQAPRLEGLIHISELSWSRVAHPRDILRVGDEVDVKVLDVAPAEGRRPARVT 172 Query: 257 LGLKQLGEDPWV-------AIAKRYP---EGTKLTGRVTNLTDYGCFVEIEEGVEGLV 304 LKQL DP + +A P E L + L D + EEG++ ++ Sbjct: 173 FSLKQLQADPLLETLDTIMPVAMPEPSVDEDELLDTPLPGLMDICSNLLTEEGIDAVI 230 Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 53/166 (31%), Positives = 89/166 (53%), Gaps = 17/166 (10%) Query: 205 YGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGE 264 + AF+ L + D+ R K+ + VG I VKV + ++ VS + L + Sbjct: 31 FRAFLPLSQMTSS-RTLDVKRSRKKNAPKSAQVGKVIEVKVTDVNDKKIVVSE--RALVQ 87 Query: 265 DPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEG------VEGLVHVSEMDWTNKNIHP 318 + V KR G + + +V +L+D+G FVE+ + +EGL+H+SE+ W+ + HP Sbjct: 88 ERGV---KRLKPGVRASAQVVSLSDFGAFVELSQDDPQAPRLEGLIHISELSWS-RVAHP 143 Query: 319 SKVVNVGDVVEVMVLDI--DEERR--RISLGLKQCKANPWQQFAET 360 ++ VGD V+V VLD+ E RR R++ LKQ +A+P + +T Sbjct: 144 RDILRVGDEVDVKVLDVAPAEGRRPARVTFSLKQLQADPLLETLDT 189 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 87/185 (47%), Gaps = 26/185 (14%) Query: 276 EGTKLTGRVTNLTDYGCFVEIEEG-VEGLVHVSEMDWT-------NKNIHPSKVVNVGDV 327 +G ++GRV G + I G + +S+M + ++ + K VG V Sbjct: 6 KGEPVSGRVEVANRGGLILRIFNGRFRAFLPLSQMTSSRTLDVKRSRKKNAPKSAQVGKV 65 Query: 328 VEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLD--- 384 +EV V D+++++ +S +A ++ + G R ++ S++DFG F+ L Sbjct: 66 IEVKVTDVNDKKIVVS-----ERALVQERGVKRLKPGVRASAQVVSLSDFGAFVELSQDD 120 Query: 385 ---GGIDGLVHLSDISWN-VAGEEAVREYKKGDEIAAVVLQVDA----ERERISLGVKQL 436 ++GL+H+S++SW+ VA + + GDE+ VL V R++ +KQL Sbjct: 121 PQAPRLEGLIHISELSWSRVAHPRDI--LRVGDEVDVKVLDVAPAEGRRPARVTFSLKQL 178 Query: 437 AEDPF 441 DP Sbjct: 179 QADPL 183 >UniRef50_UPI0001AEEEF1 30S ribosomal protein S1 n=1 Tax=Streptomyces albus J1074 RepID=UPI0001AEEEF1 Length = 273 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 56/174 (32%), Positives = 87/174 (50%), Gaps = 9/174 (5%) Query: 176 SENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG-----VDGLLHITDMAWKRVKH 230 EN A R LL G V G V + +G FV + G G + + D+ W ++H Sbjct: 95 CENPALRAFLL-GCAPGQVVTGTVAGVHGFGVFVHVDGEPEGMCTGFVRVPDLTWGWIEH 153 Query: 231 PSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDY 290 PS+ V G IT +V+ + +++L LK L EDP + A + G LTG V + + Sbjct: 154 PSQAVEAGRRITAEVITSETRSGQIALSLKALQEDPLIRFADQ--AGLVLTGTVVRILPF 211 Query: 291 GCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISL 344 G V + V GL+H+SE+ + P ++V G+ + V V ++D ER R+ L Sbjct: 212 GVLVRLAPDVVGLLHLSELG-GGPSATPGRLVAEGEPITVKVAEVDLERHRVRL 264 Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 64/221 (28%), Positives = 107/221 (48%), Gaps = 11/221 (4%) Query: 216 GLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWV-AIAKRY 274 G + + D++ +RV+HPSE+ VG EI + + R R + E+P + A Sbjct: 50 GRIPLHDVSMRRVEHPSELFTVGQEIEAE--ETGRWRGGQPHFSARACENPALRAFLLGC 107 Query: 275 PEGTKLTGRVTNLTDYGCFVEIE---EGV-EGLVHVSEMDWTNKNIHPSKVVNVGDVVEV 330 G +TG V + +G FV ++ EG+ G V V ++ W HPS+ V G + Sbjct: 108 APGQVVTGTVAGVHGFGVFVHVDGEPEGMCTGFVRVPDLTWGWIE-HPSQAVEAGRRITA 166 Query: 331 MVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGL 390 V+ + +I+L LK + +P +FA+ G + G + I FG+ + L + GL Sbjct: 167 EVITSETRSGQIALSLKALQEDPLIRFAD--QAGLVLTGTVVRILPFGVLVRLAPDVVGL 224 Query: 391 VHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISL 431 +HLS++ + R +G+ I V +VD ER R+ L Sbjct: 225 LHLSELGGGPSATPG-RLVAEGEPITVKVAEVDLERHRVRL 264 >UniRef50_P74142 30S ribosomal protein S1 homolog B n=14 Tax=Cyanobacteria RepID=RS1B_SYNY3 Length = 305 Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 65/249 (26%), Positives = 123/249 (49%), Gaps = 12/249 (4%) Query: 21 GSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQF---KNAQGELEIQVGDEVDVALDAVED 77 G V G + + V VD G KS +P ++ +A+ E + D + + ++ Sbjct: 29 GQTVHGKICQHANEGVYVDFGGKSPGFVPVQELGLRPHAEIEDSFPLDSAWDFLVTSEQN 88 Query: 78 GFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVD 137 G+ LSR + + ++W L + E +T+ V+ G KGG ++ G+R F+P S + Sbjct: 89 DEGQVRLSRRQLQIQQSWENLAELEESGKTLEMVVTGTNKGGVVGDVEGLRGFIPRSHLM 148 Query: 138 VRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKG 197 + D L G+ L+ +++ +Q N +V+++R + ++E+ + + G +G Sbjct: 149 HKDNMDAL--VGQVLKAHILEANQDNNKLVLTQRRIQQAES-------MGKIAAGNIYEG 199 Query: 198 IVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSL 257 V + YG FV++ GV GLLH++ ++ RV + + G I+V V + D + R+SL Sbjct: 200 KVAKIQPYGVFVEIEGVTGLLHVSQVSGTRVDSLNTLFAFGQAISVYVQEIDEYKNRISL 259 Query: 258 GLKQLGEDP 266 + L P Sbjct: 260 STRILETYP 268 Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 65/259 (25%), Positives = 113/259 (43%), Gaps = 25/259 (9%) Query: 103 EDAETVTGVINGKVKGGFTVELNGIRA-FLPGSLVDVRP---VRDTLHLEGKELEFKVIK 158 E +TV G I G V+ G F+P + +RP + D+ L+ +F V Sbjct: 27 EKGQTVHGKICQHANEGVYVDFGGKSPGFVPVQELGLRPHAEIEDSFPLDSA-WDFLVTS 85 Query: 159 LDQKRNNVVVSRRAVIESENSAERDQLLENLQE----GMEVKGIVKNLTDYGAFVDLGGV 214 V +SRR + + Q ENL E G ++ +V G D+ G+ Sbjct: 86 EQNDEGQVRLSRRQL-------QIQQSWENLAELEESGKTLEMVVTGTNKGGVVGDVEGL 138 Query: 215 DGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRY 274 G + + + K + VG + +L+ +++ ++ L +++ + + + Sbjct: 139 RGFIPRSHLMHKD----NMDALVGQVLKAHILEANQDNNKLVLTQRRIQQAESMG---KI 191 Query: 275 PEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLD 334 G G+V + YG FVEIE GV GL+HVS++ T + + + G + V V + Sbjct: 192 AAGNIYEGKVAKIQPYGVFVEIE-GVTGLLHVSQVSGTRVD-SLNTLFAFGQAISVYVQE 249 Query: 335 IDEERRRISLGLKQCKANP 353 IDE + RISL + + P Sbjct: 250 IDEYKNRISLSTRILETYP 268 Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 60/257 (23%), Positives = 114/257 (44%), Gaps = 21/257 (8%) Query: 190 QEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKF 248 ++G V G + + G +VD GG G + + ++ + + + V Sbjct: 27 EKGQTVHGKICQHANEGVYVDFGGKSPGFVPVQELGLRPHAEIEDSFPLDSAWDFLVTSE 86 Query: 249 DRERTRVSLGLKQLG-EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVS 307 + +V L +QL + W +A+ G L VT T+ G V EG+ G + S Sbjct: 87 QNDEGQVRLSRRQLQIQQSWENLAELEESGKTLEMVVTG-TNKGGVVGDVEGLRGFIPRS 145 Query: 308 EMDWTNKNIHPSKV-VNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNK--- 363 + +H + VG V++ +L+ +++ ++ L ++ Q AE+ K Sbjct: 146 HL------MHKDNMDALVGQVLKAHILEANQDNNKLVLTQRRI------QQAESMGKIAA 193 Query: 364 GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVD 423 G+ EGK+ I +G+F+ ++G + GL+H+S +S + + G I+ V ++D Sbjct: 194 GNIYEGKVAKIQPYGVFVEIEG-VTGLLHVSQVSGTRV-DSLNTLFAFGQAISVYVQEID 251 Query: 424 AERERISLGVKQLAEDP 440 + RISL + L P Sbjct: 252 EYKNRISLSTRILETYP 268 Score = 42.0 bits (97), Expect = 0.064, Method: Compositional matrix adjust. Identities = 56/246 (22%), Positives = 102/246 (41%), Gaps = 12/246 (4%) Query: 276 EGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDW-TNKNIHPSKVVNVGDVVEVMVLD 334 +G + G++ + G +V+ G V V E+ + I S ++ V Sbjct: 28 KGQTVHGKICQHANEGVYVDFGGKSPGFVPVQELGLRPHAEIEDSFPLDSAWDFLVTSEQ 87 Query: 335 IDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLS 394 DE + R+S Q + + W+ AE G +E + + T+ G +G G+ G + S Sbjct: 88 NDEGQVRLSRRQLQIQQS-WENLAELEESGKTLE-MVVTGTNKGGVVGDVEGLRGFIPRS 145 Query: 395 DISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIV 454 + + V G + A +L+ + + ++ L +++ + +A G I Sbjct: 146 HLMHKDNMDALV-----GQVLKAHILEANQDNNKLVLTQRRIQQAESMGKIA---AGNIY 197 Query: 455 TGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRA 514 GKV + G VE+ +GV G L S+ S RV+ + + G + +D Sbjct: 198 EGKVAKIQPYGVFVEI-EGVTGLLHVSQVSGTRVDSLNTLFAFGQAISVYVQEIDEYKNR 256 Query: 515 ISLSVR 520 ISLS R Sbjct: 257 ISLSTR 262 >UniRef50_P51345 30S ribosomal protein S1, chloroplastic n=2 Tax=Porphyra RepID=RR1_PORPU Length = 263 Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 66/247 (26%), Positives = 121/247 (48%), Gaps = 16/247 (6%) Query: 21 GSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL----EIQVGDEVDVALDAVE 76 G IV G + + + + VLVD G + +P ++ + Q EL + + D + L Sbjct: 27 GDIVAGTIFSFELNGVLVDIGTPVSAYLPIQEVSSNQ-ELNNFNSLNINDTREFFLLDYN 85 Query: 77 DGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLV 136 + +LS + + AW + + + + I G KGG V L GI F+P S Sbjct: 86 VESRQLILSIRRLEYIRAWKRIRQLLAEDSLLDVRIKGFNKGGMIVNLEGISGFVPNS-- 143 Query: 137 DVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVS-RRAVIESENSAERDQLLENLQEGMEV 195 + K ++ K++ +++K NN+++S RRA+I +S NL G + Sbjct: 144 HLNNFSKNTSSTNKFIKLKLLNVEEKSNNLILSHRRALIAQASS--------NLIVGNII 195 Query: 196 KGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRV 255 +G++ +T YG F+ G + GL+HI+++ K+V+ +GD I ++ D+++ R+ Sbjct: 196 EGVINQITPYGLFIKAGNLKGLVHISEINVKQVERIPSQFKIGDTIKAVIIHVDKKQGRL 255 Query: 256 SLGLKQL 262 SL +K L Sbjct: 256 SLSMKHL 262 Score = 71.2 bits (173), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 67/251 (26%), Positives = 122/251 (48%), Gaps = 15/251 (5%) Query: 189 LQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLK 247 L G V G + + G VD+G V L I +++ + + +N+ D +L Sbjct: 24 LNLGDIVAGTIFSFELNGVLVDIGTPVSAYLPIQEVSSNQELNNFNSLNINDTREFFLLD 83 Query: 248 FDRERTRVSLGLKQLGE-DPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHV 306 ++ E ++ L +++L W I + E + L R+ G V +E G+ G V Sbjct: 84 YNVESRQLILSIRRLEYIRAWKRIRQLLAEDSLLDVRIKGFNKGGMIVNLE-GISGFVPN 142 Query: 307 SEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDR 366 S ++ +KN + +++ +L+++E+ + L ++ Q + G+ Sbjct: 143 SHLNNFSKNTSST-----NKFIKLKLLNVEEKSNNLILSHRRALI---AQASSNLIVGNI 194 Query: 367 VEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAV-REYKKGDEIAAVVLQVDAE 425 +EG I IT +G+FI G + GLVH+S+I NV E + ++K GD I AV++ VD + Sbjct: 195 IEGVINQITPYGLFIK-AGNLKGLVHISEI--NVKQVERIPSQFKIGDTIKAVIIHVDKK 251 Query: 426 RERISLGVKQL 436 + R+SL +K L Sbjct: 252 QGRLSLSMKHL 262 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 56/263 (21%), Positives = 120/263 (45%), Gaps = 24/263 (9%) Query: 267 WVAIAKRYPE----GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVV 322 + A+ ++Y G + G + + G V+I V + + E+ +N+ ++ + Sbjct: 13 FAAVLQKYKYDLNLGDIVAGTIFSFELNGVLVDIGTPVSAYLPIQEVS-SNQELNNFNSL 71 Query: 323 NVGDVVEVMVLDIDEERRRISLGLKQCKA-NPWQQFAETHNKGDRVEGKIKSITDFGIFI 381 N+ D E +LD + E R++ L +++ + W++ + + ++ +IK G+ + Sbjct: 72 NINDTREFFLLDYNVESRQLILSIRRLEYIRAWKRIRQLLAEDSLLDVRIKGFNKGGMIV 131 Query: 382 GLDGGIDGLV---HLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQ-LA 437 L+G I G V HL++ S N + + K +L V+ + + L ++ L Sbjct: 132 NLEG-ISGFVPNSHLNNFSKNTSSTNKFIKLK--------LLNVEEKSNNLILSHRRALI 182 Query: 438 EDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSV 497 +N + G I+ G + + G ++ A ++G + SE + +VE + Sbjct: 183 AQASSNLIV----GNIIEGVINQITPYGLFIK-AGNLKGLVHISEINVKQVERIPSQFKI 237 Query: 498 GDEVEAKFTGVDRKNRAISLSVR 520 GD ++A VD+K +SLS++ Sbjct: 238 GDTIKAVIIHVDKKQGRLSLSMK 260 Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust. Identities = 22/74 (29%), Positives = 45/74 (60%), Gaps = 2/74 (2%) Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDID 336 G + G + +T YG F++ ++GLVH+SE++ PS+ +GD ++ +++ +D Sbjct: 192 GNIIEGVINQITPYGLFIK-AGNLKGLVHISEINVKQVERIPSQF-KIGDTIKAVIIHVD 249 Query: 337 EERRRISLGLKQCK 350 +++ R+SL +K K Sbjct: 250 KKQGRLSLSMKHLK 263 >UniRef50_UPI0000F2B0DB PREDICTED: similar to KIAA0185 n=1 Tax=Monodelphis domestica RepID=UPI0000F2B0DB Length = 1773 Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 94/366 (25%), Positives = 163/366 (44%), Gaps = 24/366 (6%) Query: 188 NLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVL 246 ++Q G VKG V L YG V + + GL+ +A ++++P + V DE+ +VL Sbjct: 449 DIQPGQIVKGKVFTLRSYGMIVKVTEQIKGLVPTLHLADVQIRNPQKKYRVQDEVKCRVL 508 Query: 247 KFDRERTRVSLGLKQLGEDPWVAIAKRYPEGT---KLTGRVTNLTDYGCFVEIEEGVEGL 303 D E ++ + LK+ + + Y E + G ++++ D GC V+ V GL Sbjct: 509 MCDPENKKLLMTLKKTLVESSLPALTNYKEAKPDLQTHGFISSIKDCGCIVKFYNDVRGL 568 Query: 304 VHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNK 363 V E+ P +V VG VV+V VL + E+ R+ L + + A++ K Sbjct: 569 VPQRELG-AQPISAPEEVFYVGQVVKVTVLKSEPEQERMLLSFRLSNDKEMESTAQSQKK 627 Query: 364 -----GDRVEGKIKSITDFGIFIG-LDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAA 417 G V+ K+K T+ G+ + L I L+ + +S NV + + + + +I Sbjct: 628 AMVKTGQLVDVKVKKKTEKGLEVSILPDDISALLPTTHLSDNVTNSQLLCYWLQAGDILH 687 Query: 418 VVLQVDAERERISLGVK-------QLAEDP--FNNWVALNKKGAIVTGKVTAVDAKGATV 468 VL + I L K + +DP F+ + + G ++TG V ++ A G V Sbjct: 688 KVLCLSHSDGHIVLCRKPALISAVESGQDPKVFSEF----QPGMLLTGFVKSIKAYGIFV 743 Query: 469 ELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEK 528 + G+ G S S V + G V AK T VD + + + LS+R D + E Sbjct: 744 QFPSGLSGLAPKSALSDKFVTTISDHFVEGQTVVAKVTNVDEEKQRMLLSLRLSDVSQED 803 Query: 529 DAIATV 534 +++ Sbjct: 804 TTASSL 809 Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats. Identities = 66/305 (21%), Positives = 141/305 (46%), Gaps = 32/305 (10%) Query: 151 ELEFKVIKLDQKRNNVVVS-RRAVIESENSAERDQLLENLQEG---MEVKGIVKNLTDYG 206 E++ +V+ D + ++++ ++ ++ES A L N +E ++ G + ++ D G Sbjct: 502 EVKCRVLMCDPENKKLLMTLKKTLVESSLPA-----LTNYKEAKPDLQTHGFISSIKDCG 556 Query: 207 AFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGED 265 V V GL+ ++ + + P E+ VG + V VLK + E+ R+ L + + Sbjct: 557 CIVKFYNDVRGLVPQRELGAQPISAPEEVFYVGQVVKVTVLKSEPEQERMLLSFRLSNDK 616 Query: 266 PWVAIAKRYPEGTKLTGRVTNL-----TDYGCFVEI-EEGVEGLVHVSEMDWTNKNIHPS 319 + A+ + TG++ ++ T+ G V I + + L+ + + + N+ S Sbjct: 617 EMESTAQSQKKAMVKTGQLVDVKVKKKTEKGLEVSILPDDISALLPTTHL---SDNVTNS 673 Query: 320 KV----VNVGDVV-EVMVLDIDEE-----RRRISLGLKQCKANPWQQFAETHNKGDRVEG 369 ++ + GD++ +V+ L + R+ + + +P + F+E G + G Sbjct: 674 QLLCYWLQAGDILHKVLCLSHSDGHIVLCRKPALISAVESGQDP-KVFSE-FQPGMLLTG 731 Query: 370 KIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERI 429 +KSI +GIF+ G+ GL S +S + + +G + A V VD E++R+ Sbjct: 732 FVKSIKAYGIFVQFPSGLSGLAPKSALSDKFVTTIS-DHFVEGQTVVAKVTNVDEEKQRM 790 Query: 430 SLGVK 434 L ++ Sbjct: 791 LLSLR 795 >UniRef50_C1G573 rRNA biogenesis protein RRP5 n=4 Tax=Onygenales RepID=C1G573_PARBD Length = 1780 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 99/374 (26%), Positives = 180/374 (48%), Gaps = 47/374 (12%) Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMA--WKRVKHPSEIVNVGDEIT 242 L+ ++ G G V N+ D ++++ V G L ITD++ V ++ VG I Sbjct: 1014 LDKVEIGSSWLGFVNNIGDDCLWINITPNVRGRLRITDVSDDLSLVGDVTKNFPVGSAIK 1073 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKR----YPEGTKLTGRVTNLTDYGCFVEIEE 298 V V + ++ R+ L K DP + KR + +G L GRVT ++D V++ + Sbjct: 1074 VHVTGVNVDKNRLDLSAKH--GDP---LNKRTISDFSKGEILLGRVTKVSDRQVLVQLSD 1128 Query: 299 GVEGLVHVSEM--DWTN---KNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKA-- 351 G +++ +M D+T N H + +V+ V +LD+D ++I L ++ + Sbjct: 1129 TTVGAINLIDMADDYTKVIPANFHKN------EVLRVCILDVDVPNKKILLSVRPSRVLS 1182 Query: 352 ------NPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEA 405 +P + D V G ++ + + G+F+ L + V +SD+S + ++ Sbjct: 1183 SSLPIEDPEIKSISQLKVNDIVRGFVRRVANNGLFVTLGHEVTAYVRISDLSDSYL-KDW 1241 Query: 406 VREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVA------LNKKGAIVTGKVT 459 E++ + ++ VDAE ++ + +K+ +P N+ A LN+ G IVTGKV Sbjct: 1242 QSEFQVDQLVHGRIIFVDAEANKLQMSLKESVLEP--NYKAPITIRDLNR-GQIVTGKVR 1298 Query: 460 AVDAKGATVELADG---VEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAIS 516 +V+ GA + + DG + G +E + +VEDA + GD V+AK +D IS Sbjct: 1299 SVEEFGAFI-VIDGTANLSGLCHRTEMAEQKVEDARKLFEKGDIVKAKILKIDHDKERIS 1357 Query: 517 LSVRAK--DEADEK 528 L ++A E+D+K Sbjct: 1358 LGLKASYFKESDDK 1371 Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 49/177 (27%), Positives = 86/177 (48%), Gaps = 13/177 (7%) Query: 195 VKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERT 253 V+G V+ + + G FV LG V + I+D++ +K V + +++ D E Sbjct: 1204 VRGFVRRVANNGLFVTLGHEVTAYVRISDLSDSYLKDWQSEFQVDQLVHGRIIFVDAEAN 1263 Query: 254 RVSLGLKQLGEDPWVAIA---KRYPEGTKLTGRVTNLTDYGCFVEIE--EGVEGLVHVSE 308 ++ + LK+ +P + G +TG+V ++ ++G F+ I+ + GL H +E Sbjct: 1264 KLQMSLKESVLEPNYKAPITIRDLNRGQIVTGKVRSVEEFGAFIVIDGTANLSGLCHRTE 1323 Query: 309 MDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGD 365 M K K+ GD+V+ +L ID ++ RISLGLK F E+ +K D Sbjct: 1324 M-AEQKVEDARKLFEKGDIVKAKILKIDHDKERISLGLKAS------YFKESDDKSD 1373 Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 35/110 (31%), Positives = 65/110 (59%), Gaps = 6/110 (5%) Query: 155 KVIKLDQKRNNVVVS-RRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG 213 ++I +D + N + +S + +V+E A + +L G V G V+++ ++GAF+ + G Sbjct: 1254 RIIFVDAEANKLQMSLKESVLEPNYKAP--ITIRDLNRGQIVTGKVRSVEEFGAFIVIDG 1311 Query: 214 ---VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLK 260 + GL H T+MA ++V+ ++ GD + K+LK D ++ R+SLGLK Sbjct: 1312 TANLSGLCHRTEMAEQKVEDARKLFEKGDIVKAKILKIDHDKERISLGLK 1361 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 73/315 (23%), Positives = 131/315 (41%), Gaps = 49/315 (15%) Query: 260 KQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPS 319 +Q GE P A + + EG+K+TG V N+ G FVE G+ G + MD + P Sbjct: 788 RQRGELP--AKFEDFQEGSKVTGFVKNIIADGLFVEFLRGLTGFLPKRLMD-DDHVAKPD 844 Query: 320 KVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQ-----QFAETHNKG--DRVEGKIK 372 + + V I+++R+R +L +K+ + + + + A N+ + V+G IK Sbjct: 845 FGYTLSQTISSFVHSIEDDRQRFTLSMKENQTSKQRVSDNARPASNANQASINPVDGDIK 904 Query: 373 SITD--FG--------------IFIGLDGGIDGLVHLSDI--SWNVAGE--EAVREYKKG 412 S D FG I + L I G + +S+I W+ + + +R +K Sbjct: 905 SFDDLTFGRITKAKIVSVKETQINVQLADNIQGRIDVSEIFDGWDAIKDRKQPLRYFKPK 964 Query: 413 DEIAAVVLQVDAERERISLGVK---------QLAEDPFN------NWVALNKK--GAIVT 455 I ++ + R L + +L+ P + ++L+K G+ Sbjct: 965 QIIPVRIIGIHDARSHKFLPISHRSGKYPVFELSAKPSSLESKDIELLSLDKVEIGSSWL 1024 Query: 456 GKVTAVDAKGATVELADGVEGYLRASEASRD--RVEDATLVLSVGDEVEAKFTGVDRKNR 513 G V + + + V G LR ++ S D V D T VG ++ TGV+ Sbjct: 1025 GFVNNIGDDCLWINITPNVRGRLRITDVSDDLSLVGDVTKNFPVGSAIKVHVTGVNVDKN 1084 Query: 514 AISLSVRAKDEADEK 528 + LS + D +++ Sbjct: 1085 RLDLSAKHGDPLNKR 1099 >UniRef50_A4S384 Predicted protein n=2 Tax=Ostreococcus RepID=A4S384_OSTLU Length = 1869 Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 63/253 (24%), Positives = 116/253 (45%), Gaps = 11/253 (4%) Query: 192 GMEVKGIVKNLT-DYGAFVDLGGVD-GLLHITDMAWKRVKHPSEIVNVGDEITVKVL--- 246 G +V+GI+ + + G V LG G +H+TDMA + P G + V+VL Sbjct: 1214 GAKVQGIITRVVENVGLMVQLGSHSVGRVHLTDMADEYDDDPCAKYEAGQVVQVRVLNAS 1273 Query: 247 ---KFDRERTRVSLGLKQLGE-DPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 + D L K+ DP + G ++ G V + GCF+ + G++ Sbjct: 1274 SNGELDLSMRASRLSSKRTSPTDPEITDISNLVPGQRVKGYVKATSKKGCFIALSRGIDA 1333 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHN 362 + +S + + P+K G +VE ++ D + R+ L ++ A T Sbjct: 1334 MCKLSNL-ADSFIADPAKTFPPGKLVEGRIVSADAAKGRVELAFRETDATQGNADVSTVK 1392 Query: 363 KGDRVEGKIKSITDFGIFIGLDGG-IDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQ 421 GD + G ++ + +G+F+ LDG + GL H+S + ++ ++G+ + VL+ Sbjct: 1393 VGDVLIGTVRRVQPYGVFVSLDGTKLSGLCHISMFADARISDDLASHVRQGERVRTKVLE 1452 Query: 422 VDAERERISLGVK 434 ++ E +ISLG+K Sbjct: 1453 INTETNKISLGIK 1465 Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 83/415 (20%), Positives = 173/415 (41%), Gaps = 46/415 (11%) Query: 8 LFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL-EIQVGD 66 L +ESL E GS+ VV +++ ++ G+ S + KN +L EI+ G Sbjct: 205 LTKESLTE-----GSVAPAVVQSVEDHGYILSFGIADTSGFLPK--KNVASDLGEIRKGR 257 Query: 67 EVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTG--VINGKVKG------ 118 +DV + G KR + + E + + +T+ ++N ++K Sbjct: 258 IIDVVITGAPKGNKGYFTVTSDQKRIKTSVAHETSATNVDTLLPGMLVNSRIKQILSDGV 317 Query: 119 --GFTVELNG-IRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIE 175 F +G + F G+L + V + G+ + ++I +D V ++ + Sbjct: 318 SVSFMTYFSGTVDCFHTGALATSKGVSSAFKV-GQRMRARIIFVDSASKRVSLTLLPHLL 376 Query: 176 SENSAERDQLLENLQEGM-----EVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKH 230 S E +L + Q +G+ +++D + G H++ ++ +RV+ Sbjct: 377 DYASIELPKLGKTFQTAKIERVDAGQGVALSISD-----GKNDIAGYAHVSQLSDERVEK 431 Query: 231 PSEIVNVGDEITVKVLKFDR-ERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTD 289 + +G ++V+V+ + + P+ ++ + P G + G V + Sbjct: 432 VEKKFKIGRSVSVRVIGHRLLDGVVSVSLKSSVMAQPFFSLDELTP-GMLVNGEVLAVEH 490 Query: 290 YGCFVEIEEGVEGL---VHVSEM--DWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISL 344 YG V++ EG++ L +H+S++ T+ + P G ++ VL++D RR ++ Sbjct: 491 YGAIVKLAEGIKALCPPLHISDIVGRTTSAKVAP------GAKLKFRVLNVDRNSRRATV 544 Query: 345 GLKQCKAN---PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDI 396 K+ P E G G + + ++G+F+ L G + GL L+D+ Sbjct: 545 SHKRTLIKSELPVIGQIEDAVPGSITHGVVTGVNEYGVFVSLYGDLKGLAGLNDL 599 >UniRef50_Q6BJC7 DEHA2G03410p n=4 Tax=Saccharomycetales RepID=Q6BJC7_DEBHA Length = 1716 Score = 84.7 bits (208), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 93/394 (23%), Positives = 184/394 (46%), Gaps = 43/394 (10%) Query: 118 GGFTVE-LNGIRAFLPGS-LVDVRPVRDTLHLE-GKELEFKVIKLDQKRNNVVVSRRAVI 174 GG V+ LNG A +PG+ + DVR V + G +++ +V++ Q R +++++ Sbjct: 516 GGIIVKILNGFEALVPGNHMSDVRLVYPERKFKVGGKVKGRVLR-KQGRKLFFTLKKSLV 574 Query: 175 ESENSAERDQLLENLQE---GMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKH 230 + E D++L + G + V+ GA V G + L +++ V Sbjct: 575 ----NIEDDEILTGFDKATVGFKSPATVEKFVHNGAIVSFFGNLRAYLPKNEISETFVNQ 630 Query: 231 PSEIVNVGDEITVKVLKFDRERTRVSLGLKQ---LGEDPWVAIAKRYPEGTKLTGRVTNL 287 S+ + +G + VK+L +++ R+ + L+Q L + I+ YP + T V Sbjct: 631 ASDHLKIGQTVNVKILNVNKDDQRLMVTLRQSIDLSDSQKATISDLYPGKSITTAIVVEK 690 Query: 288 TDYGCFVEIEEG-VEGLV---HVSEMDW-TNKNIHPSKVVNVGDVVEVMVLDIDEERRRI 342 VE+E + G++ H+S+ ++ N++I K + +GD ++V+VL+ D + R + Sbjct: 691 VKESVIVELENSNLRGVIFSGHLSDGNYEQNRSIF--KKLPIGDKIDVLVLEKDLKSRSV 748 Query: 343 SLGLKQCKANPWQQ------FAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDI 396 ++ K +Q F + + G IKS+T+ G+FI G + GLV L+ Sbjct: 749 TVSAKASLIEAAKQDEVPAYFKDIKVDNKMLHGYIKSVTNMGLFISFAGKLTGLV-LAKY 807 Query: 397 SWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQL--AEDPFNNWVALNK----- 449 + + E+ +++ K ++ V+++D E +R L +K+ ++D N +N Sbjct: 808 ATDKPDEDLSKKFYKYQSVSCRVIRIDEENKRFLLSLKKSENSKDSSNTEEVINPIDSEK 867 Query: 450 -------KGAIVTGKVTAVDAKGATVELADGVEG 476 G I + V ++ V+LAD ++G Sbjct: 868 STVGDYTPGVITSAVVKSIKGTQLNVQLADNLQG 901 Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 76/294 (25%), Positives = 143/294 (48%), Gaps = 36/294 (12%) Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEM--DWTNKNIHPSKVVNVGDVVEVMVLD 334 G KL RV + D VE+ + + +++ D+T K V + D VL Sbjct: 1071 GDKLPARVLKVRDTFVLVELGKNLVASSFITDALNDYTEK---LENVFHTNDFCTATVLA 1127 Query: 335 IDEERRRISLGLKQCKA-NPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHL 393 +DEE ++I++ L+ A + E N+GD + G +K++ + G++I L I LV + Sbjct: 1128 VDEESKKIAVSLRNDDATDKVIDSIEDLNRGDIIRGFVKNVANNGVYIALGRSIHALVRI 1187 Query: 394 SDISWNVAGEEAVREYKKGDEIAAVVL-QVDAERE--RISLGVKQLAEDPFNNWVALNKK 450 +D+S + ++++KK + ++ ++ + +E RI + +K E N + + KK Sbjct: 1188 TDLS-----DSFLKDWKKYFKPHQPIIGKISSCKEEGRILMTLK---ESEINGELNVLKK 1239 Query: 451 ------GAIVTGKVTAVDAKGATVELADG---VEGYLRASEASRDRVEDATLVLSVGDEV 501 G I G V V GA ++L DG + G S+ S + VE+ + + GD V Sbjct: 1240 FEDLEVGEIFEGSVRRVTDFGAFIKL-DGTVNISGLCHHSQISDNDVENVSSLFGEGDRV 1298 Query: 502 EAKFTGVDRKNRAISLSVRAK-----DEADEKDAIATVNKQEDANFSNNAMAEA 550 + K +D++ + +SL ++A D + E+D + + DAN N++ +E+ Sbjct: 1299 KVKILAIDQEKKQLSLGMKASYFTNADASSEQDDV----EMSDANDQNDSGSES 1348 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 33/91 (36%), Positives = 56/91 (61%), Gaps = 5/91 (5%) Query: 175 ESENSAERDQL--LENLQEGMEVKGIVKNLTDYGAFVDLGG---VDGLLHITDMAWKRVK 229 ESE + E + L E+L+ G +G V+ +TD+GAF+ L G + GL H + ++ V+ Sbjct: 1227 ESEINGELNVLKKFEDLEVGEIFEGSVRRVTDFGAFIKLDGTVNISGLCHHSQISDNDVE 1286 Query: 230 HPSEIVNVGDEITVKVLKFDRERTRVSLGLK 260 + S + GD + VK+L D+E+ ++SLG+K Sbjct: 1287 NVSSLFGEGDRVKVKILAIDQEKKQLSLGMK 1317 >UniRef50_Q0PQD3 30S ribosomal protein S1 (Fragment) n=2 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=Q0PQD3_9GAMM Length = 104 Score = 84.7 bits (208), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 42/57 (73%), Positives = 47/57 (82%) Query: 463 AKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSV 519 AKGA ++LADGVEGYLRASE SRDRVEDA +L G E+EAK GVDRKNR ISLS+ Sbjct: 8 AKGAVIDLADGVEGYLRASELSRDRVEDARTLLKEGQEIEAKLIGVDRKNRTISLSI 64 >UniRef50_B1L330 Ribosomal protein S1 n=2 Tax=Clostridium botulinum RepID=B1L330_CLOBM Length = 262 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 67/266 (25%), Positives = 124/266 (46%), Gaps = 24/266 (9%) Query: 81 ETLLSREKAKRHEAWIT--LEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDV 138 E S+ K A IT E+ +E+ T +I +G + +P +++V Sbjct: 6 EIFASKHSKKILTAHITGIEERLFEEKPTDCAIIQN---------FDGYKIIIPSFVMNV 56 Query: 139 RPVRDTLH-LEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKG 197 R R L L G E++F V+ + + V SR A +E + A D + E + + Sbjct: 57 RNDRSVLRSLVGSEVDFIVVGIQEDEKIAVASRLAAMEIKRKA--DLIKHEAGETISCRV 114 Query: 198 IVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSL 257 + +D V+ G++ ++ ++ + +K + VGD I K+L+ D E + L Sbjct: 115 VAIGASD--IVVEFMGLETKINKKEVDYGYIKDLRKYAQVGDRIQAKILEIDAENQILQL 172 Query: 258 GLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIH 317 +K L P + K YP+ ++ G++ N+ ++G F+E+++G+ ++ +W N N Sbjct: 173 SMKALKPSPIEIVEKNYPKNSEHAGKIVNIENFGIFIELQQGI--VILCPPPNWANFN-- 228 Query: 318 PSKVVNVGDVVEVMVLDIDEERRRIS 343 N+GD V + ID ER R+S Sbjct: 229 ----PNIGDTYLVRIKRIDRERERVS 250 Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 57/215 (26%), Positives = 99/215 (46%), Gaps = 29/215 (13%) Query: 231 PSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKR--------------YPE 276 PS ++NV ++ +V E + +G++ ED +A+A R + Sbjct: 50 PSFVMNVRNDRSVLRSLVGSEVDFIVVGIQ---EDEKIAVASRLAAMEIKRKADLIKHEA 106 Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTN-KNIHPSKVVNVGDVVEVMVLDI 335 G ++ RV + VE G+E ++ E+D+ K++ K VGD ++ +L+I Sbjct: 107 GETISCRVVAIGASDIVVEFM-GLETKINKKEVDYGYIKDLR--KYAQVGDRIQAKILEI 163 Query: 336 DEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSD 395 D E + + L +K K +P + + + K GKI +I +FGIFI L GI ++ Sbjct: 164 DAENQILQLSMKALKPSPIEIVEKNYPKNSEHAGKIVNIENFGIFIELQQGI--VILCPP 221 Query: 396 ISWNVAGEEAVREYKKGDEIAAVVLQVDAERERIS 430 +W A GD + ++D ERER+S Sbjct: 222 PNW------ANFNPNIGDTYLVRIKRIDRERERVS 250 >UniRef50_B5HYS5 30S ribosomal protein S1 n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5HYS5_9ACTO Length = 267 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 55/166 (33%), Positives = 88/166 (53%), Gaps = 12/166 (7%) Query: 170 RRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL---------GGVDGLLHI 220 R ++ +EN E L+ L+ G + G V + +G FV L GV G + Sbjct: 82 RLSMAATENP-ELWAFLKRLRHGELLSGTVAAIERFGVFVALDEGPEHPVYPGV-GFITY 139 Query: 221 TDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKL 280 +++W+R + S++V VG ++ + L+FD L L+ + DP+V G +L Sbjct: 140 PELSWRRFETASDVVEVGQRVSCEFLQFDTWNGEARLSLRAMQPDPFVVFVDGVVVGQRL 199 Query: 281 TGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGD 326 +GRVT L +G FVE+ +G+EGLVH+SE++ + P VV VGD Sbjct: 200 SGRVTKLVPFGVFVELADGIEGLVHLSELN-SVPVAAPEDVVQVGD 244 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 63/195 (32%), Positives = 93/195 (47%), Gaps = 15/195 (7%) Query: 222 DMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDP--WVAIAKRYPEGTK 279 D +W+R H S++ VG + +V D + RV L + E+P W A KR G Sbjct: 50 DGSWRR--HFSDVAVVGQRVAGEVTAVDLDAGRVRLSMAAT-ENPELW-AFLKRLRHGEL 105 Query: 280 LTGRVTNLTDYGCFVEIEEGVE-------GLVHVSEMDWTNKNIHPSKVVNVGDVVEVMV 332 L+G V + +G FV ++EG E G + E+ W S VV VG V Sbjct: 106 LSGTVAAIERFGVFVALDEGPEHPVYPGVGFITYPELSWRRFETA-SDVVEVGQRVSCEF 164 Query: 333 LDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVH 392 L D L L+ + +P+ F + G R+ G++ + FG+F+ L GI+GLVH Sbjct: 165 LQFDTWNGEARLSLRAMQPDPFVVFVDGVVVGQRLSGRVTKLVPFGVFVELADGIEGLVH 224 Query: 393 LSDI-SWNVAGEEAV 406 LS++ S VA E V Sbjct: 225 LSELNSVPVAAPEDV 239 Score = 65.5 bits (158), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 60/195 (30%), Positives = 92/195 (47%), Gaps = 16/195 (8%) Query: 317 HPSKVVNVGDVV--EVMVLDIDEERRRISLGLKQCKANP--WQQFAETHNKGDRVEGKIK 372 H S V VG V EV +D+D R R+S+ + NP W F + G+ + G + Sbjct: 56 HFSDVAVVGQRVAGEVTAVDLDAGRVRLSMAATE---NPELWA-FLKRLRHGELLSGTVA 111 Query: 373 SITDFGIFIGLDGGID-------GLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAE 425 +I FG+F+ LD G + G + ++SW E A + G ++ LQ D Sbjct: 112 AIERFGVFVALDEGPEHPVYPGVGFITYPELSWR-RFETASDVVEVGQRVSCEFLQFDTW 170 Query: 426 RERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASR 485 L ++ + DPF +V G ++G+VT + G VELADG+EG + SE + Sbjct: 171 NGEARLSLRAMQPDPFVVFVDGVVVGQRLSGRVTKLVPFGVFVELADGIEGLVHLSELNS 230 Query: 486 DRVEDATLVLSVGDE 500 V V+ VGD+ Sbjct: 231 VPVAAPEDVVQVGDQ 245 >UniRef50_B1MZ34 Transcriptional accessory protein n=12 Tax=Bacilli RepID=B1MZ34_LEUCK Length = 733 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 39/75 (52%), Positives = 59/75 (78%), Gaps = 1/75 (1%) Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 +E+LQ GM+++G V+N+ D+GAFVDLG DGL+HI+ + +RVKHPSEIV+VGD + V Sbjct: 652 IEDLQPGMKLQGTVRNVVDFGAFVDLGVKHDGLVHISRLVKRRVKHPSEIVSVGDIVNVW 711 Query: 245 VLKFDRERTRVSLGL 259 V++ D++R R+ L + Sbjct: 712 VVEVDQKRQRIGLTM 726 Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 30/70 (42%), Positives = 49/70 (70%), Gaps = 1/70 (1%) Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDID 336 G KL G V N+ D+G FV++ +GLVH+S + + HPS++V+VGD+V V V+++D Sbjct: 658 GMKLQGTVRNVVDFGAFVDLGVKHDGLVHISRL-VKRRVKHPSEIVSVGDIVNVWVVEVD 716 Query: 337 EERRRISLGL 346 ++R+RI L + Sbjct: 717 QKRQRIGLTM 726 >UniRef50_C5DF89 KLTH0D13156p n=2 Tax=Saccharomycetaceae RepID=C5DF89_LACTC Length = 1731 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 83/312 (26%), Positives = 158/312 (50%), Gaps = 39/312 (12%) Query: 141 VRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVK 200 + D+ L G L KV+ +DQ RN + VS R + ++++ G + + Sbjct: 1047 IEDSFPL-GCALRTKVVSIDQDRNTLSVSART--------HDIKGIKDINVGDCLPARLL 1097 Query: 201 NLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDE---ITVKVLKFDRERTRVS 256 +TD ++LG V G+ TD A P + V + ++ KV+ D++ +++ Sbjct: 1098 KITDSYLLLELGENVRGVAFATD-ALDDYSKPLKDVYANQKNSIVSAKVISIDKDDGKLN 1156 Query: 257 LGLKQLGEDPWVAIAKRYPE---GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEM---- 309 L L+ E+P AK + + G + G V +T+ G F+ + ++ V VS++ Sbjct: 1157 LSLR--SENPRDGTAKTHEDLKRGDVVRGLVKKITEKGIFIYLSSTLQAFVPVSKLTDSF 1214 Query: 310 --DWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNK---G 364 DW K P + V VG VV ++ I + LK+ + N + +++N G Sbjct: 1215 IKDW-RKFFKPMQSV-VGKVVNC------DDDSHILVTLKESEVNGELRILKSYNDIKVG 1266 Query: 365 DRVEGKIKSITDFGIFIGLDGGID--GLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQV 422 + EG +K++TDFG+F+ LD ++ GL H ++++ + G+ A + GD++ A+VL+V Sbjct: 1267 EIFEGAVKNVTDFGLFVKLDNTVNVTGLAHKTEVADSAVGDLA-SIFGVGDKVKAIVLKV 1325 Query: 423 DAERERISLGVK 434 + +++++SLG+K Sbjct: 1326 NPDKKQLSLGLK 1337 Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 57/242 (23%), Positives = 110/242 (45%), Gaps = 21/242 (8%) Query: 211 LGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAI 270 L G+ G L ++++ VK P + + +G + VKVL+ ++E+ RV + K E A Sbjct: 628 LNGLRGFLPNSNISEAYVKRPQDHLRLGQTVIVKVLQHNKEQNRVIVTCKVSSE---AAS 684 Query: 271 AKRYPEGTKLTGR-------VTNLTDYGCFVEIEEGVEGLVHVSEMDWTN--KNIHPSKV 321 +R + GR V D ++ G+ G+V+V + + +N K Sbjct: 685 LQREAIENMIVGRSIIKVAVVEKTKDSIVVEQVGTGLRGVVYVGHLSDSRVEQNRAQLKK 744 Query: 322 VNVGDVVEVMVLDIDEERRRISLGLKQC------KANPWQQFAETHNKGDR--VEGKIKS 373 + +G +E +V+D DE R +L K+ K+ + + +G+ G +KS Sbjct: 745 LKIGSELEGLVIDKDERTRVFNLSCKKSLMKDAEKSLLPLNYQDVKQRGNHSPFNGYVKS 804 Query: 374 ITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGV 433 +++ G+F+ +G GLV L + + ++ ++A +L+ D + ER L Sbjct: 805 VSEKGVFVAFNGQFVGLV-LPSYAVDSRDVSLSSKFYVNQSVSAFLLRTDDDNERFLLSF 863 Query: 434 KQ 435 K+ Sbjct: 864 KE 865 Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 95/402 (23%), Positives = 189/402 (47%), Gaps = 38/402 (9%) Query: 11 ESLKEIETRPGSIVRGVVVA--IDKDVVLVDAGLKSESAIPAEQFKNAQ---GELEIQVG 65 E L+ I+ G+IV G + DK + L G + ++ +P + + E + ++G Sbjct: 501 EYLRPIDIPVGTIVPGCEITEVSDKGIKLSIFGGQFKATVPPLHISDIRLVYPERKFKIG 560 Query: 66 DEVD-VALDAVEDG-----FGETL--LSREKAKRHEAWITLEK-AYEDAETVTGVINGKV 116 +V + ++A E G ++L L RE+ + ++ +EK A D++ V K Sbjct: 561 SKVKGILINATERGQLFMSLKKSLVNLDREETELASSFEDIEKIASSDSKLAATVDIFKP 620 Query: 117 KGGFTVELNGIRAFLPGSLVD---VRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAV 173 G LNG+R FLP S + V+ +D L L G+ + KV++ ++++N V+V+ + Sbjct: 621 NGCIVSFLNGLRGFLPNSNISEAYVKRPQDHLRL-GQTVIVKVLQHNKEQNRVIVTCK-- 677 Query: 174 IESENSAERDQLLENLQEGMEV--KGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKH 230 + SE ++ + + +EN+ G + +V+ D +G G+ G++++ ++ RV+ Sbjct: 678 VSSEAASLQREAIENMIVGRSIIKVAVVEKTKDSIVVEQVGTGLRGVVYVGHLSDSRVEQ 737 Query: 231 PS---EIVNVGDEITVKVLKFDRERTRV-SLGLKQ-LGEDPWVAI-------AKRYPEGT 278 + + +G E+ V+ D ERTRV +L K+ L +D ++ K+ + Sbjct: 738 NRAQLKKLKIGSELEGLVIDKD-ERTRVFNLSCKKSLMKDAEKSLLPLNYQDVKQRGNHS 796 Query: 279 KLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEE 338 G V ++++ G FV GLV + ++++ S V V +L D++ Sbjct: 797 PFNGYVKSVSEKGVFVAFNGQFVGLV-LPSYAVDSRDVSLSSKFYVNQSVSAFLLRTDDD 855 Query: 339 RRRISLGLKQCKANPWQQFAETHNKG-DRVEGKIKSITDFGI 379 R L K+ K + E+ + V+ IK +++F + Sbjct: 856 NERFLLSFKEPKNEKSSKTPESERPAINPVDQSIKEVSEFAL 897 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 51/172 (29%), Positives = 87/172 (50%), Gaps = 15/172 (8%) Query: 100 KAYED---AETVTGVINGKVKGGFTVELNG-IRAFLPGSLVDVRPVRD--TLHLEGKELE 153 K +ED + V G++ + G + L+ ++AF+P S + ++D + + Sbjct: 1170 KTHEDLKRGDVVRGLVKKITEKGIFIYLSSTLQAFVPVSKLTDSFIKDWRKFFKPMQSVV 1229 Query: 154 FKVIKLDQKRNNVVVSRRAVIESENSAERDQL--LENLQEGMEVKGIVKNLTDYGAFVDL 211 KV+ D + +V + ESE + E L +++ G +G VKN+TD+G FV L Sbjct: 1230 GKVVNCDDDSHILVTLK----ESEVNGELRILKSYNDIKVGEIFEGAVKNVTDFGLFVKL 1285 Query: 212 GG---VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLK 260 V GL H T++A V + I VGD++ VLK + ++ ++SLGLK Sbjct: 1286 DNTVNVTGLAHKTEVADSAVGDLASIFGVGDKVKAIVLKVNPDKKQLSLGLK 1337 >UniRef50_C1ECK5 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1ECK5_9CHLO Length = 2018 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 74/280 (26%), Positives = 133/280 (47%), Gaps = 18/280 (6%) Query: 168 VSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGA--FVDLGGVD-GLLHITDMA 224 V+R+ +I + SA++ N+ EG ++ GIV + G FV L G +H+TD+A Sbjct: 1277 VARKKIIVTLRSADK----RNVVEGAKIAGIVSKIAPGGGGVFVQLNSRQHGRVHVTDIA 1332 Query: 225 WKRVKHPSEIVNVGDEITVKVLKF----DRERTRVSLGLKQLGEDPWVAIAKRYPEGTKL 280 P ++ +VG+ + V+VL + + + S LK G ++ + G + Sbjct: 1333 DDPRSEPWKLHSVGEAVEVRVLGVGEGGEVDLSMKSSALKSKGSSNGISSVSQLAPGAHV 1392 Query: 281 TGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERR 340 +G V + GCFV I V+ V + + T + P++ G +V+ +L +DE Sbjct: 1393 SGFVKQVNKGGCFVAISRSVDARVKMCNLADTFVS-DPAQEFPKGKLVKGTILSVDESSG 1451 Query: 341 RISLGLKQCKANPWQQFAETHN-----KGDRVEGKIKSITDFGIFIGLDG-GIDGLVHLS 394 R + L+ + ++ N +G G ++ + +G+F+ LDG G GL H+S Sbjct: 1452 RAEMTLRSDGMDAAAGRSQIDNNAHVEEGSVQMGTVRRVQTYGVFVTLDGSGRSGLCHIS 1511 Query: 395 DISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVK 434 + + + + G+ + VLQVD E +ISLG+K Sbjct: 1512 MFADARIKDSLEQHVRAGERVRVKVLQVDEETGKISLGMK 1551 Score = 62.0 bits (149), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 90/317 (28%), Positives = 131/317 (41%), Gaps = 42/317 (13%) Query: 146 HLEGKELEFKVIKLDQKRNNVVVSR---RAVIESENSAERDQL---LENLQEGMEVKGIV 199 HL+ E FKV K + R V+ SR S S DQ LE L GM+V+G V Sbjct: 442 HLDKLEKRFKVGK--KVRARVIGSRAMDSVATVSCKSTVLDQPFLSLEELVPGMQVRGEV 499 Query: 200 KNLTDYGAFVDLG-GVDGLL---HITDMAWKRVKHPSEIVNV----GDEITVKVLKFDRE 251 + YGA V L GV L HI+D+ P + N G +V+ DR Sbjct: 500 VAVEPYGAVVKLAPGVKALCPPNHISDI-------PGRVTNAKVKEGLSAKFRVVSVDRV 552 Query: 252 RTR-VSLGLKQL--GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSE 308 + R V KQL E P VA GT G VT + YG FV++ + GL + + Sbjct: 553 KGRAVVTHKKQLIRSELPVVASLDDATPGTTTHGVVTGVEPYGVFVQLYGNLRGLAGLQD 612 Query: 309 MDWTNKNIHPSKVVNVGDVVEVMVLDID--EERRRISLGLKQCKANPWQQFAETHNKGDR 366 + P + VG VV V+ D E++ ++SL AN KGD Sbjct: 613 LGLAADQT-PQEAFAVGQVVRATVIRSDRGEQKIKLSLAPGGAVANGNDLDGTPGEKGDV 671 Query: 367 VEGKIKSITDFG-----------IFIGLDGGIDGLVHLSDIS-WNVAGEEAVREYKKGDE 414 + ++ + + + L GG+ G+V + +S + G + + GDE Sbjct: 672 GAPEPGTVVESATVKRVDEATGNVQVTLPGGVPGVVTAAQMSDHPLTGAGLSQAFAPGDE 731 Query: 415 IAAVV-LQVDAERERIS 430 I +V L+ R +S Sbjct: 732 IGPLVALEAKPRRSILS 748 >UniRef50_Q7XYL3 Ribosomal protein rpS1 n=1 Tax=Bigelowiella natans RepID=Q7XYL3_BIGNA Length = 419 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 74/252 (29%), Positives = 127/252 (50%), Gaps = 29/252 (11%) Query: 22 SIVRGVVVAID-KDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGF- 79 + V G V+++D K VD G KS + +P +GE+ + DV ++ F Sbjct: 132 TTVTGTVISLDSKGGAYVDVGAKSLAYLP-------RGEISMGGMKAEDVLFPGLKRDFT 184 Query: 80 --------GETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFL 131 + +LS ++ AW + + E T++G I +GGF +E++ ++ FL Sbjct: 185 VSKASTMASDVVLSIKRMLIPTAWTRVRQMAELDVTLSGKILSHNRGGFIIEVDSLQGFL 244 Query: 132 PGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVS-RRAVIESENSAERDQLLENLQ 190 P S + +D + GK + K +++D + +V+S RRAV S +N + Sbjct: 245 PFSQMATSVDKD--EMIGKVIPVKFLEVDMENQRLVMSNRRAVASS--------FKKNYK 294 Query: 191 EGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDR 250 G V G V L YGAF++LGGV+GLLHI+ ++ V ++++VG ++ V ++ D Sbjct: 295 VGDVVVGTVTALKPYGAFINLGGVNGLLHISQISHDHVTSVKDVMDVGQKLKVMIMSRD- 353 Query: 251 ERTRVSLGLKQL 262 + RVSL K+L Sbjct: 354 QNGRVSLSTKRL 365 Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust. Identities = 69/257 (26%), Positives = 130/257 (50%), Gaps = 20/257 (7%) Query: 101 AYEDAETVTG-VINGKVKGGFTVELNGIR-AFLPGSLVDVRPVR-DTLHLEGKELEFKVI 157 +++ TVTG VI+ KGG V++ A+LP + + ++ + + G + +F V Sbjct: 127 SFDALTTVTGTVISLDSKGGAYVDVGAKSLAYLPRGEISMGGMKAEDVLFPGLKRDFTVS 186 Query: 158 KLDQKRNNVVVS-RRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDG 216 K ++VV+S +R +I + + R Q+ E + + G + + G +++ + G Sbjct: 187 KASTMASDVVLSIKRMLIPTAWTRVR-QMAE---LDVTLSGKILSHNRGGFIIEVDSLQG 242 Query: 217 LLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPE 276 L + MA K E++ G I VK L+ D E R+ + ++ + K Y Sbjct: 243 FLPFSQMATSVDK--DEMI--GKVIPVKFLEVDMENQRLVMSNRRAVASSF---KKNYKV 295 Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSK-VVNVGDVVEVMVLDI 335 G + G VT L YG F+ + GV GL+H+S++ ++ ++ K V++VG ++VM++ Sbjct: 296 GDVVVGTVTALKPYGAFINL-GGVNGLLHISQI--SHDHVTSVKDVMDVGQKLKVMIMSR 352 Query: 336 DEERRRISLGLKQCKAN 352 D+ R+SL K+ + N Sbjct: 353 DQN-GRVSLSTKRLEPN 368 Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust. Identities = 43/171 (25%), Positives = 88/171 (51%), Gaps = 14/171 (8%) Query: 267 WVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGD 326 W + + L+G++ + G +E++ ++G + S+M + K +G Sbjct: 208 WTRVRQMAELDVTLSGKILSHNRGGFIIEVDS-LQGFLPFSQMATSV-----DKDEMIGK 261 Query: 327 VVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGG 386 V+ V L++D E +R+ + ++ A+ F + + GD V G + ++ +G FI L GG Sbjct: 262 VIPVKFLEVDMENQRLVMSNRRAVAS---SFKKNYKVGDVVVGTVTALKPYGAFINL-GG 317 Query: 387 IDGLVHLSDISW-NVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQL 436 ++GL+H+S IS +V + V + G ++ +++ D + R+SL K+L Sbjct: 318 VNGLLHISQISHDHVTSVKDVMDV--GQKLKVMIMSRD-QNGRVSLSTKRL 365 >UniRef50_Q05022 rRNA biogenesis protein RRP5 n=10 Tax=Saccharomycetaceae RepID=RRP5_YEAST Length = 1729 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 79/268 (29%), Positives = 133/268 (49%), Gaps = 32/268 (11%) Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITD------MAWKRVKHPSEIVNVG 238 + ++ G E+ G V + + +DLG V G+ ITD + K +I NV Sbjct: 1082 MSTIKVGDELPGRVLKIAEKYVLLDLGNKVTGISFITDALNDFSLTLKEA-FEDKINNV- 1139 Query: 239 DEITVKVLKFDRERTRVSLGLKQ-LGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE 297 I VL D + ++ L L+ + + + +G + G V N+ D G FV + Sbjct: 1140 --IPTTVLSVDEQNKKIELSLRPATAKTRSIKSHEDLKQGEIVDGIVKNVNDKGIFVYLS 1197 Query: 298 EGVEGLVHVSEM------DWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKA 351 VE V VS++ +W K P + V +G VV +E RISL L++ + Sbjct: 1198 RKVEAFVPVSKLSDSYLKEW-KKFYKPMQYV-LGKVVTC------DEDSRISLTLRESEI 1249 Query: 352 NPWQQFAETHN---KGDRVEGKIKSITDFGIFIGLDGGID--GLVHLSDISWNVAGEEAV 406 N + +T++ GD EG IKS+TDFG+F+ LD ++ GL H+++I+ + E+ Sbjct: 1250 NGDLKVLKTYSDIKAGDVFEGTIKSVTDFGVFVKLDNTVNVTGLAHITEIA-DKKPEDLS 1308 Query: 407 REYKKGDEIAAVVLQVDAERERISLGVK 434 + GD + A+VL+ + E+++ISL +K Sbjct: 1309 ALFGVGDRVKAIVLKTNPEKKQISLSLK 1336 Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 90/361 (24%), Positives = 157/361 (43%), Gaps = 45/361 (12%) Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLGGV----DGLLHITDMAWKRVKHPSEIVNVGDEI 241 LE + G E+ G V N + ++ + V LL + D ++ + +G + Sbjct: 997 LEEINIGQELTGFVNNSSGNHLWLTISPVLKARISLLDLADNDSNFSENIESVFPLGSAL 1056 Query: 242 TVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPE--------GTKLTGRVTNLTDYGCF 293 VKV DRE V+ AI K + + G +L GRV + + Sbjct: 1057 QVKVASIDREHGFVN------------AIGKSHVDINMSTIKVGDELPGRVLKIAEKYVL 1104 Query: 294 VEIEEGVEGLVHVSE----MDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC 349 +++ V G+ +++ T K K+ NV + VL +DE+ ++I L L+ Sbjct: 1105 LDLGNKVTGISFITDALNDFSLTLKEAFEDKINNV---IPTTVLSVDEQNKKIELSLRPA 1161 Query: 350 KANPWQ-QFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVRE 408 A + E +G+ V+G +K++ D GIF+ L ++ V +S +S + +E + Sbjct: 1162 TAKTRSIKSHEDLKQGEIVDGIVKNVNDKGIFVYLSRKVEAFVPVSKLS-DSYLKEWKKF 1220 Query: 409 YKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKK------GAIVTGKVTAVD 462 YK + V+ D E RISL L E N + + K G + G + +V Sbjct: 1221 YKPMQYVLGKVVTCD-EDSRISL---TLRESEINGDLKVLKTYSDIKAGDVFEGTIKSVT 1276 Query: 463 AKGATVELAD--GVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 G V+L + V G +E + + ED + + VGD V+A + + + ISLS++ Sbjct: 1277 DFGVFVKLDNTVNVTGLAHITEIADKKPEDLSALFGVGDRVKAIVLKTNPEKKQISLSLK 1336 Query: 521 A 521 A Sbjct: 1337 A 1337 Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 73/302 (24%), Positives = 128/302 (42%), Gaps = 32/302 (10%) Query: 211 LGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWV-- 268 GG+ G L ++++ VK P E + +G + VK+L D +R R+ K E Sbjct: 627 FGGLSGFLPNSEISEVFVKRPEEHLRLGQTVIVKLLDVDADRRRIIATCKVSNEQAAQQK 686 Query: 269 -AIAKRYPEGTKLTGRVTNLTDYGCFVEIEE-GVEGLVHVSEMDWTN--KNIHPSKVVNV 324 I P T +T V T VEI + G+ G+++V + + +N K + + Sbjct: 687 DTIENIVPGRTIITVHVIEKTKDSVIVEIPDVGLRGVIYVGHLSDSRIEQNRAQLKKLRI 746 Query: 325 GDVVEVMVLDIDEERRRISLGLKQC--KANPWQQFAETH------NKGDRVEGKIKSITD 376 G + +V+D D R ++ LK K + T+ NK + IKSI+D Sbjct: 747 GTELTGLVIDKDTRTRVFNMSLKSSLIKDAKKETLPLTYDDVKDLNKDVPMHAYIKSISD 806 Query: 377 FGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQL 436 G+F+ +G GLV L + + + + + + +L+ D + ++ L +K Sbjct: 807 KGLFVAFNGKFIGLV-LPSYAVDSRDIDISKAFYINQSVTVYLLRTDDKNQKFLLSLKAP 865 Query: 437 A------------EDPFN----NWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRA 480 EDP + +W L+ G+IV K+ +V V LA + G + Sbjct: 866 KVKEEKKKVESNIEDPVDSSIKSWDDLS-IGSIVKAKIKSVKKNQLNVILAANLHGRVDI 924 Query: 481 SE 482 +E Sbjct: 925 AE 926 Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 49/171 (28%), Positives = 86/171 (50%), Gaps = 13/171 (7%) Query: 100 KAYED---AETVTGVI-NGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEF- 154 K++ED E V G++ N KG F + AF+P S + +++ K +++ Sbjct: 1169 KSHEDLKQGEIVDGIVKNVNDKGIFVYLSRKVEAFVPVSKLSDSYLKEWKKFY-KPMQYV 1227 Query: 155 --KVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG 212 KV+ D+ + R + I + + +++ G +G +K++TD+G FV L Sbjct: 1228 LGKVVTCDEDSRISLTLRESEINGDLKVLK--TYSDIKAGDVFEGTIKSVTDFGVFVKLD 1285 Query: 213 G---VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLK 260 V GL HIT++A K+ + S + VGD + VLK + E+ ++SL LK Sbjct: 1286 NTVNVTGLAHITEIADKKPEDLSALFGVGDRVKAIVLKTNPEKKQISLSLK 1336 Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust. Identities = 78/334 (23%), Positives = 132/334 (39%), Gaps = 41/334 (12%) Query: 218 LHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQL------GEDPWVAI- 270 LHI+D R+ +P +G ++ +V+ + R V + LK+ E P V+ Sbjct: 542 LHISDT---RLVYPERKFKIGSKVKGRVISVN-SRGNVHVTLKKSLVNIEDNELPLVSTY 597 Query: 271 --AKRYPEGT-KLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDV 327 AK E K + GC + G+ G + SE+ P + + +G Sbjct: 598 ENAKNIKEKNEKTLATIQVFKPNGCIISFFGGLSGFLPNSEISEVFVK-RPEEHLRLGQT 656 Query: 328 VEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGK-------IKSITDFGIF 380 V V +LD+D +RRRI + CK + Q + + V G+ I+ D I Sbjct: 657 VIVKLLDVDADRRRI---IATCKVSNEQAAQQKDTIENIVPGRTIITVHVIEKTKDSVIV 713 Query: 381 IGLDGGIDGLV---HLSD--ISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQ 435 D G+ G++ HLSD I N A +++ + G E+ +V+ D ++ +K Sbjct: 714 EIPDVGLRGVIYVGHLSDSRIEQNRA---QLKKLRIGTELTGLVIDKDTRTRVFNMSLKS 770 Query: 436 -LAEDPFNNWVALN-------KKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDR 487 L +D + L K + + ++ KG V G + S A R Sbjct: 771 SLIKDAKKETLPLTYDDVKDLNKDVPMHAYIKSISDKGLFVAFNGKFIGLVLPSYAVDSR 830 Query: 488 VEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRA 521 D + + V D KN+ LS++A Sbjct: 831 DIDISKAFYINQSVTVYLLRTDDKNQKFLLSLKA 864 >UniRef50_Q31C04 SSU ribosomal protein S1P n=6 Tax=Prochlorococcus marinus RepID=Q31C04_PROM9 Length = 404 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 70/259 (27%), Positives = 125/259 (48%), Gaps = 24/259 (9%) Query: 9 FEESLKEIET--RPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQ--------FKNAQG 58 F E+L E E G + G V+AI+ D + VD G K+ +P ++ FK Sbjct: 119 FLEALNENEPIGATGETISGKVIAIESDGLYVDIGGKAPGYMPKKECGLGVITNFKE--- 175 Query: 59 ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 + +G E++V + ++ G +S ++W + + ++ E + +ING +G Sbjct: 176 --KFSIGLEMEVLVIKEQNADGMVTVSARALILRQSWEKVSNSAKNGELIDVLINGFNRG 233 Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 G T +++G+R F+P S + +D GK L+ ++++ + SR+ V+ SE Sbjct: 234 GLTCDVDGLRGFIPRS--QLEDGQDYQSFVGKTLKVAFLEVNPE------SRKLVL-SEK 284 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVG 238 A L +L G ++G V + YG F+DLGG GLLH + + ++ EI G Sbjct: 285 KASLVSKLTSLDLGQLIEGEVLAVKPYGFFIDLGGASGLLHQSSLTKGSIRSLREIFREG 344 Query: 239 DEITVKVLKFDRERTRVSL 257 + I + + D E+ R+ L Sbjct: 345 EIIKALISEIDLEKGRIGL 363 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 58/252 (23%), Positives = 117/252 (46%), Gaps = 23/252 (9%) Query: 192 GMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDR 250 G + G V + G +VD+GG G + + + + E ++G E+ V V+K Sbjct: 133 GETISGKVIAIESDGLYVDIGGKAPGYMPKKECGLGVITNFKEKFSIGLEMEVLVIKEQN 192 Query: 251 ERTRVSLGLKQL-GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEM 309 V++ + L W ++ G + + G +++ G+ G + S++ Sbjct: 193 ADGMVTVSARALILRQSWEKVSNSAKNGELIDVLINGFNRGGLTCDVD-GLRGFIPRSQL 251 Query: 310 ----DWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGD 365 D+ + VG ++V L+++ E R++ L K KA+ + + + G Sbjct: 252 EDGQDYQS---------FVGKTLKVAFLEVNPESRKLVLSEK--KASLVSKLT-SLDLGQ 299 Query: 366 RVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVRE-YKKGDEIAAVVLQVDA 424 +EG++ ++ +G FI L GG GL+H S ++ ++RE +++G+ I A++ ++D Sbjct: 300 LIEGEVLAVKPYGFFIDL-GGASGLLHQSSLTKGSI--RSLREIFREGEIIKALISEIDL 356 Query: 425 ERERISLGVKQL 436 E+ RI L L Sbjct: 357 EKGRIGLNTALL 368 >UniRef50_C6J336 Ribosomal protein S1 n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J336_9BACL Length = 274 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 56/213 (26%), Positives = 102/213 (47%), Gaps = 14/213 (6%) Query: 130 FLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENL 189 ++P + + L G+ + FK++ D++ + + SR+A +E + L Sbjct: 68 YIPQEFSGTKDAHEFRRLLGEPVAFKILSYDREGDTFIASRQAALEHMEGL----TWKWL 123 Query: 190 QEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFD 249 ++ + +V+N+T +D+GG+ L + + + V E ++ GD + VKV++ D Sbjct: 124 EQDAVITAVVRNVTPKVLMLDIGGITTELPVQEYGYGWVDDLREEISAGDHLKVKVVELD 183 Query: 250 RERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEM 309 +E V + K + PW AKRY G+V+ + +YG FV +E GV+ LV Sbjct: 184 KENKIVKVSKKATEKSPWPDCAKRYVSKGTYKGKVSGVMEYGIFVNLERGVDALV----- 238 Query: 310 DWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRI 342 +I K V GD V + V +D ++ RI Sbjct: 239 ----PHIRFGK-VKRGDTVYIRVRGVDPKQERI 266 Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 59/109 (54%), Gaps = 12/109 (11%) Query: 322 VNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFI 381 ++ GD ++V V+++D+E + + + K + +PW A+ + +GK+ + ++GIF+ Sbjct: 169 ISAGDHLKVKVVELDKENKIVKVSKKATEKSPWPDCAKRYVSKGTYKGKVSGVMEYGIFV 228 Query: 382 GLDGGIDGLV-HLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERI 429 L+ G+D LV H+ + K+GD + V VD ++ERI Sbjct: 229 NLERGVDALVPHIR-----------FGKVKRGDTVYIRVRGVDPKQERI 266 >UniRef50_C7RH14 RNA binding S1 domain protein n=4 Tax=Anaerococcus RepID=C7RH14_ANAPD Length = 699 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 35/80 (43%), Positives = 63/80 (78%), Gaps = 1/80 (1%) Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 +++L+EGM +KG V+N+TD+GAFVD+G G+DGL+H++ ++ K +K+P+E++ + VK Sbjct: 619 IDDLKEGMILKGKVRNITDFGAFVDIGVGIDGLVHVSKISNKFIKNPNEVLTNSQVVEVK 678 Query: 245 VLKFDRERTRVSLGLKQLGE 264 V++ DR++ R+ L +K +GE Sbjct: 679 VIEIDRKKERIGLSMKDIGE 698 Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 35/73 (47%), Positives = 53/73 (72%), Gaps = 3/73 (4%) Query: 276 EGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNI-HPSKVVNVGDVVEVMVLD 334 EG L G+V N+TD+G FV+I G++GLVHVS++ +NK I +P++V+ VVEV V++ Sbjct: 624 EGMILKGKVRNITDFGAFVDIGVGIDGLVHVSKI--SNKFIKNPNEVLTNSQVVEVKVIE 681 Query: 335 IDEERRRISLGLK 347 ID ++ RI L +K Sbjct: 682 IDRKKERIGLSMK 694 Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 46/73 (63%), Gaps = 3/73 (4%) Query: 367 VEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAV-VLQVDAE 425 ++GK+++ITDFG F+ + GIDGLVH+S IS + E ++ V V+++D + Sbjct: 628 LKGKVRNITDFGAFVDIGVGIDGLVHVSKISNKFI--KNPNEVLTNSQVVEVKVIEIDRK 685 Query: 426 RERISLGVKQLAE 438 +ERI L +K + E Sbjct: 686 KERIGLSMKDIGE 698 >UniRef50_C1DZB9 Elongation factor Ts n=1 Tax=Micromonas sp. RCC299 RepID=C1DZB9_9CHLO Length = 876 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 57/174 (32%), Positives = 87/174 (50%), Gaps = 30/174 (17%) Query: 200 KNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLG 258 K + +YG FVD G DGL+HI+++ V++ +++V+ +TV V D E+ R+SL Sbjct: 152 KRVQEYGCFVDFGAKNDGLVHISELKDGFVENVTDVVSADQAVTVWVKSIDAEKGRISLT 211 Query: 259 LKQLGE-DPWVAIAKRYPE---------------------------GTKLTGRVTNLTDY 290 +K D AI + E GT G V ++ + Sbjct: 212 MKPPPTADELEAIKAKEAEREAKFAARKAQQAEARAAAEKVKAIKKGTAFEGEVKSVQPF 271 Query: 291 GCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISL 344 G FVEI EGVEGLVHV+EM + N+ + VGD V V VLD+D + ++++ Sbjct: 272 GAFVEIMEGVEGLVHVTEMS-DDYNVDVADFCKVGDKVSVKVLDVDGAKVKLTM 324 Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 53/176 (30%), Positives = 89/176 (50%), Gaps = 36/176 (20%) Query: 287 LTDYGCFVEIEEGVEGLVHVSEM-DWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLG 345 + +YGCFV+ +GLVH+SE+ D +N+ + VV+ V V V ID E+ RISL Sbjct: 154 VQEYGCFVDFGAKNDGLVHISELKDGFVENV--TDVVSADQAVTVWVKSIDAEKGRISLT 211 Query: 346 LKQC------------KANPWQQFA----------------ETHNKGDRVEGKIKSITDF 377 +K +A +FA + KG EG++KS+ F Sbjct: 212 MKPPPTADELEAIKAKEAEREAKFAARKAQQAEARAAAEKVKAIKKGTAFEGEVKSVQPF 271 Query: 378 GIFIGLDGGIDGLVHLSDIS--WNVAGEEAVREYKKGDEIAAVVLQVDAERERISL 431 G F+ + G++GLVH++++S +NV + K GD+++ VL VD + ++++ Sbjct: 272 GAFVEIMEGVEGLVHVTEMSDDYNV---DVADFCKVGDKVSVKVLDVDGAKVKLTM 324 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 50/167 (29%), Positives = 69/167 (41%), Gaps = 31/167 (18%) Query: 372 KSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAV-VLQVDAERERIS 430 K + ++G F+ DGLVH+S++ E V + D+ V V +DAE+ RIS Sbjct: 152 KRVQEYGCFVDFGAKNDGLVHISELKDGFV--ENVTDVVSADQAVTVWVKSIDAEKGRIS 209 Query: 431 LGVKQLA---------------EDPF-------------NNWVALNKKGAIVTGKVTAVD 462 L +K E F V KKG G+V +V Sbjct: 210 LTMKPPPTADELEAIKAKEAEREAKFAARKAQQAEARAAAEKVKAIKKGTAFEGEVKSVQ 269 Query: 463 AKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVD 509 GA VE+ +GVEG + +E S D D VGD+V K VD Sbjct: 270 PFGAFVEIMEGVEGLVHVTEMSDDYNVDVADFCKVGDKVSVKVLDVD 316 >UniRef50_C9KQS8 Protein YhgF n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KQS8_9FIRM Length = 733 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 38/84 (45%), Positives = 60/84 (71%), Gaps = 1/84 (1%) Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 L L+ G ++G V+N+TD+GAFVD+G DGL+HI+++A +RVKHP E+V++G + V Sbjct: 650 LSELKPGTILRGTVRNITDFGAFVDIGLHEDGLIHISELAKRRVKHPLEVVSIGQVLRVM 709 Query: 245 VLKFDRERTRVSLGLKQLGEDPWV 268 V+ D +R R+ L LK++ E+ V Sbjct: 710 VISVDEKRGRIGLSLKRVPEEASV 733 Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 34/72 (47%), Positives = 50/72 (69%), Gaps = 1/72 (1%) Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDID 336 GT L G V N+TD+G FV+I +GL+H+SE+ + HP +VV++G V+ VMV+ +D Sbjct: 656 GTILRGTVRNITDFGAFVDIGLHEDGLIHISEL-AKRRVKHPLEVVSIGQVLRVMVISVD 714 Query: 337 EERRRISLGLKQ 348 E+R RI L LK+ Sbjct: 715 EKRGRIGLSLKR 726 Score = 42.7 bits (99), Expect = 0.041, Method: Compositional matrix adjust. Identities = 23/76 (30%), Positives = 44/76 (57%), Gaps = 1/76 (1%) Query: 364 GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVD 423 G + G +++ITDFG F+ + DGL+H+S+++ + + G + +V+ VD Sbjct: 656 GTILRGTVRNITDFGAFVDIGLHEDGLIHISELAKRRV-KHPLEVVSIGQVLRVMVISVD 714 Query: 424 AERERISLGVKQLAED 439 +R RI L +K++ E+ Sbjct: 715 EKRGRIGLSLKRVPEE 730 >UniRef50_B8BUB4 Predicted protein n=1 Tax=Thalassiosira pseudonana RepID=B8BUB4_THAPS Length = 348 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 53/172 (30%), Positives = 95/172 (55%), Gaps = 7/172 (4%) Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLGGVD-GLLHITDMAWKRVKHPSEIVNVGDEIT-V 243 L++L+ G +V G V ++ D+GAF+++G GLLHI+ + RV + + + VGD + Sbjct: 131 LKDLKLGSKVSGTVVDVCDFGAFINIGYASRGLLHISQIQDTRVANINNVFKVGDTVEGA 190 Query: 244 KVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGL 303 +V+ D + V L L+ + P ++ G L G+V ++ YG FV++ L Sbjct: 191 RVINVDLAKGEVGLSLR--SKRPKRVDLNKFKVGDTLEGKVDSVVSYGVFVDVGASTNAL 248 Query: 304 VHVSEMDWTN-KNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPW 354 +H+S + + +NI +N GD V V V+DID ER+ +++ + KA+ + Sbjct: 249 LHISRITGSAIENIRHH--LNEGDPVSVHVIDIDVERKTMAVSMLDKKADQY 298 Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 46/159 (28%), Positives = 88/159 (55%), Gaps = 7/159 (4%) Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTN-KNIHPSKVVNVGDVVE-VMVLD 334 G+K++G V ++ D+G F+ I GL+H+S++ T NI+ V VGD VE V++ Sbjct: 137 GSKVSGTVVDVCDFGAFINIGYASRGLLHISQIQDTRVANIN--NVFKVGDTVEGARVIN 194 Query: 335 IDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLS 394 +D + + L L+ + P + GD +EGK+ S+ +G+F+ + + L+H+S Sbjct: 195 VDLAKGEVGLSLRSKR--PKRVDLNKFKVGDTLEGKVDSVVSYGVFVDVGASTNALLHIS 252 Query: 395 DISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGV 433 I+ + A E +GD ++ V+ +D ER+ +++ + Sbjct: 253 RITGS-AIENIRHHLNEGDPVSVHVIDIDVERKTMAVSM 290 Score = 42.0 bits (97), Expect = 0.055, Method: Compositional matrix adjust. Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 1/84 (1%) Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 L + G ++G V ++ YG FVD+G + LLHI+ + +++ +N GD ++V Sbjct: 216 LNKFKVGDTLEGKVDSVVSYGVFVDVGASTNALLHISRITGSAIENIRHHLNEGDPVSVH 275 Query: 245 VLKFDRERTRVSLGLKQLGEDPWV 268 V+ D ER +++ + D ++ Sbjct: 276 VIDIDVERKTMAVSMLDKKADQYL 299 >UniRef50_Q9LK47 Similarity to 30s ribosomal protein s1 n=5 Tax=Magnoliophyta RepID=Q9LK47_ARATH Length = 392 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 56/191 (29%), Positives = 90/191 (47%), Gaps = 18/191 (9%) Query: 263 GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVV 322 G W G G V G + V G + ++ + P K + Sbjct: 93 GPSDWKTAKAYCKSGDTFEGEVQGFNGGGLLIRFHSLV-GFLPYPQLSPSRSCKEPQKSI 151 Query: 323 N------VGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITD 376 + VG + V V+ DEE R++ L K W ++++ N GD G++ S+ D Sbjct: 152 HEIAKTLVGSKLPVKVVQADEENRKLILSEKLAL---WPKYSQNVNVGDVFNGRVGSVED 208 Query: 377 FGIFIGL---DG--GIDGLVHLSDISWNVAGEEAVRE-YKKGDEIAAVVLQVDAERERIS 430 +G FI L DG + GLVH+S++SW+ + VR+ + GDE+ +V +D E+ RI+ Sbjct: 209 YGAFIHLRFDDGLYHLTGLVHVSEVSWDYV--QDVRDVLRDGDEVRVIVTNIDKEKSRIT 266 Query: 431 LGVKQLAEDPF 441 L +KQL +DP Sbjct: 267 LSIKQLEDDPL 277 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 52/187 (27%), Positives = 95/187 (50%), Gaps = 22/187 (11%) Query: 95 WITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLP-GSLVDVRPVRD---TLH---- 146 W T + + +T G + G GG + + + FLP L R ++ ++H Sbjct: 97 WKTAKAYCKSGDTFEGEVQGFNGGGLLIRFHSLVGFLPYPQLSPSRSCKEPQKSIHEIAK 156 Query: 147 -LEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDY 205 L G +L KV++ D++ +++S + + + S +N+ G G V ++ DY Sbjct: 157 TLVGSKLPVKVVQADEENRKLILSEKLALWPKYS-------QNVNVGDVFNGRVGSVEDY 209 Query: 206 GAFVDLGGVDGLLHIT------DMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGL 259 GAF+ L DGL H+T +++W V+ +++ GDE+ V V D+E++R++L + Sbjct: 210 GAFIHLRFDDGLYHLTGLVHVSEVSWDYVQDVRDVLRDGDEVRVIVTNIDKEKSRITLSI 269 Query: 260 KQLGEDP 266 KQL +DP Sbjct: 270 KQLEDDP 276 Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 52/182 (28%), Positives = 92/182 (50%), Gaps = 26/182 (14%) Query: 189 LQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKR-VKHPSEIVN------VGDEI 241 + G +G V+ G + + G L ++ R K P + ++ VG ++ Sbjct: 104 CKSGDTFEGEVQGFNGGGLLIRFHSLVGFLPYPQLSPSRSCKEPQKSIHEIAKTLVGSKL 163 Query: 242 TVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPE----GTKLTGRVTNLTDYGCFVEI- 296 VKV++ D E ++ L K +A+ +Y + G GRV ++ DYG F+ + Sbjct: 164 PVKVVQADEENRKLILSEK-------LALWPKYSQNVNVGDVFNGRVGSVEDYGAFIHLR 216 Query: 297 -EEGV---EGLVHVSEMDWTN-KNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKA 351 ++G+ GLVHVSE+ W +++ V+ GD V V+V +ID+E+ RI+L +KQ + Sbjct: 217 FDDGLYHLTGLVHVSEVSWDYVQDVR--DVLRDGDEVRVIVTNIDKEKSRITLSIKQLED 274 Query: 352 NP 353 +P Sbjct: 275 DP 276 Score = 48.9 bits (115), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 47/178 (26%), Positives = 82/178 (46%), Gaps = 15/178 (8%) Query: 354 WQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEE---AVREYK 410 W+ GD EG+++ G+ I + G + +S + + +E ++ E Sbjct: 97 WKTAKAYCKSGDTFEGEVQGFNGGGLLIRFHSLV-GFLPYPQLSPSRSCKEPQKSIHEIA 155 Query: 411 K---GDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGAT 467 K G ++ V+Q D E ++ L K ++ V + G + G+V +V+ GA Sbjct: 156 KTLVGSKLPVKVVQADEENRKLILSEKLALWPKYSQNVNV---GDVFNGRVGSVEDYGAF 212 Query: 468 VELA--DGV---EGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 + L DG+ G + SE S D V+D VL GDEV T +D++ I+LS++ Sbjct: 213 IHLRFDDGLYHLTGLVHVSEVSWDYVQDVRDVLRDGDEVRVIVTNIDKEKSRITLSIK 270 >UniRef50_B2A6S4 RNA binding S1 domain protein n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A6S4_NATTJ Length = 727 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 39/78 (50%), Positives = 61/78 (78%), Gaps = 3/78 (3%) Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 LE+L EGM ++G ++N+ D+GAFVDLG DGL+HI++++ K VKHP EIV+VGD + V+ Sbjct: 652 LEDLSEGMILEGEIRNVVDFGAFVDLGIKEDGLIHISNLSEKFVKHPMEIVSVGDVVQVE 711 Query: 245 VLKFDRERTRVSLGLKQL 262 ++ D++R R+ GLK++ Sbjct: 712 IVSIDKDRGRI--GLKKV 727 Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 29/70 (41%), Positives = 48/70 (68%), Gaps = 3/70 (4%) Query: 276 EGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNI-HPSKVVNVGDVVEVMVLD 334 EG L G + N+ D+G FV++ +GL+H+S + + K + HP ++V+VGDVV+V ++ Sbjct: 657 EGMILEGEIRNVVDFGAFVDLGIKEDGLIHIS--NLSEKFVKHPMEIVSVGDVVQVEIVS 714 Query: 335 IDEERRRISL 344 ID++R RI L Sbjct: 715 IDKDRGRIGL 724 Score = 43.1 bits (100), Expect = 0.030, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 12/101 (11%) Query: 342 ISLGLKQCKANPWQQFAETHNKGDRV-----------EGKIKSITDFGIFIGLDGGIDGL 390 I GLK+ +P ++F + K D + EG+I+++ DFG F+ L DGL Sbjct: 625 ILTGLKKPLYDPREEFDKPRLKKDVMKLEDLSEGMILEGEIRNVVDFGAFVDLGIKEDGL 684 Query: 391 VHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISL 431 +H+S++S + + GD + ++ +D +R RI L Sbjct: 685 IHISNLSEKFV-KHPMEIVSVGDVVQVEIVSIDKDRGRIGL 724 >UniRef50_D1J1D7 Whole genome shotgun sequence of line PN40024, scaffold_62.assembly12x (Fragment) n=4 Tax=rosids RepID=D1J1D7_VITVI Length = 390 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 55/187 (29%), Positives = 93/187 (49%), Gaps = 18/187 (9%) Query: 267 WVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVN--- 323 W A G GR+ G V V G + ++ ++ P K + Sbjct: 95 WKAARAHLESGFIYEGRIEGFNGGGLLVRFYSLV-GFLPFPQLSPSHSCKEPHKTIQEIA 153 Query: 324 ---VGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIF 380 +G ++ V V+ DEE+R++ K+ W +F++ N GD E + S+ D+G F Sbjct: 154 KGLIGSLISVKVILADEEKRKLIFSEKEAA---WLKFSKQINIGDIFEAMVGSVEDYGAF 210 Query: 381 IGL---DG--GIDGLVHLSDISWNVAGEEAVRE-YKKGDEIAAVVLQVDAERERISLGVK 434 + L DG + GLVH+S++SW++ + VR+ +GDE+ +++VD + RI+L +K Sbjct: 211 VHLRFPDGLYHLTGLVHVSEVSWDLV--QDVRDVLNEGDEVRVKIVKVDRVKSRITLSIK 268 Query: 435 QLAEDPF 441 QL EDP Sbjct: 269 QLEEDPL 275 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 58/194 (29%), Positives = 90/194 (46%), Gaps = 22/194 (11%) Query: 88 KAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLH- 146 +A+R W E G I G GG V + FLP + H Sbjct: 88 QARRSADWKAARAHLESGFIYEGRIEGFNGGGLLVRFYSLVGFLPFPQLSPSHSCKEPHK 147 Query: 147 --------LEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGI 198 L G + KVI D+++ R +I SE A + + + G + + Sbjct: 148 TIQEIAKGLIGSLISVKVILADEEK-------RKLIFSEKEAAWLKFSKQINIGDIFEAM 200 Query: 199 VKNLTDYGAFVDLGGVDGLLHIT------DMAWKRVKHPSEIVNVGDEITVKVLKFDRER 252 V ++ DYGAFV L DGL H+T +++W V+ +++N GDE+ VK++K DR + Sbjct: 201 VGSVEDYGAFVHLRFPDGLYHLTGLVHVSEVSWDLVQDVRDVLNEGDEVRVKIVKVDRVK 260 Query: 253 TRVSLGLKQLGEDP 266 +R++L +KQL EDP Sbjct: 261 SRITLSIKQLEEDP 274 Score = 62.0 bits (149), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 51/195 (26%), Positives = 91/195 (46%), Gaps = 18/195 (9%) Query: 172 AVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKR-VKH 230 A+ ++ SA+ +L+ G +G ++ G V + G L ++ K Sbjct: 85 AIRQARRSADWKAARAHLESGFIYEGRIEGFNGGGLLVRFYSLVGFLPFPQLSPSHSCKE 144 Query: 231 PSEIVN------VGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRV 284 P + + +G I+VKV+ D E+ ++ K E W+ +K+ G V Sbjct: 145 PHKTIQEIAKGLIGSLISVKVILADEEKRKLIFSEK---EAAWLKFSKQINIGDIFEAMV 201 Query: 285 TNLTDYGCFVEIE-----EGVEGLVHVSEMDW-TNKNIHPSKVVNVGDVVEVMVLDIDEE 338 ++ DYG FV + + GLVHVSE+ W +++ V+N GD V V ++ +D Sbjct: 202 GSVEDYGAFVHLRFPDGLYHLTGLVHVSEVSWDLVQDVR--DVLNEGDEVRVKIVKVDRV 259 Query: 339 RRRISLGLKQCKANP 353 + RI+L +KQ + +P Sbjct: 260 KSRITLSIKQLEEDP 274 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 83/185 (44%), Gaps = 21/185 (11%) Query: 354 WQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEA---VREYK 410 W+ G EG+I+ G+ + + G + +S + + +E ++E Sbjct: 95 WKAARAHLESGFIYEGRIEGFNGGGLLVRFYSLV-GFLPFPQLSPSHSCKEPHKTIQEIA 153 Query: 411 KG---DEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKK---GAIVTGKVTAVDAK 464 KG I+ V+ D E+ ++ K+ A W+ +K+ G I V +V+ Sbjct: 154 KGLIGSLISVKVILADEEKRKLIFSEKEAA------WLKFSKQINIGDIFEAMVGSVEDY 207 Query: 465 GATVEL--ADGV---EGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSV 519 GA V L DG+ G + SE S D V+D VL+ GDEV K VDR I+LS+ Sbjct: 208 GAFVHLRFPDGLYHLTGLVHVSEVSWDLVQDVRDVLNEGDEVRVKIVKVDRVKSRITLSI 267 Query: 520 RAKDE 524 + +E Sbjct: 268 KQLEE 272 >UniRef50_A9SPX0 Predicted protein n=2 Tax=cellular organisms RepID=A9SPX0_PHYPA Length = 1785 Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 87/356 (24%), Positives = 148/356 (41%), Gaps = 21/356 (5%) Query: 183 DQLL---ENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVG 238 DQLL ++Q M V G V + YGA V L GV L + M+ + +PS VG Sbjct: 357 DQLLLSHADVQPAMNVTGTVIAVEPYGALVQLAEGVKALCPLQHMSEFQRSNPSSKFQVG 416 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYP---EGTKLTGRVTNLTDYGCFVE 295 ++ +VL D +++L K+ ++ Y EG G +T + D GCFV Sbjct: 417 SKLKFRVLSCDHHAKKITLTHKKTLITSKLSPIVSYESAVEGLVTHGFITGIEDIGCFVS 476 Query: 296 IEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGL--KQCKANP 353 V+GLVH S + + V VG ++ VL D RR+SL + + Sbjct: 477 FYNDVKGLVHKSALG-IEAGVKAENVFQVGQSIKCRVLRSDPAARRLSLSFITTSSRDDA 535 Query: 354 WQQFAETHNKGDRVEGKIKSITDFGIFI------GLDGGIDGLVHLSDISWNVAGEEAVR 407 + A G V G + + D I + GL G HLSD ++ ++V Sbjct: 536 SEGAAGDELIGKVVAGTVHHVNDSVIIVNVSTPTGLVKGYLTFPHLSDTLGHIEQLKSVT 595 Query: 408 EYKKGDEIAAVVLQVDAERERISLGVKQ---LAEDPFNNWVALNKKGAIVTGKVTAVDAK 464 K G + +++ +++++ + KQ A + ++ + +++ G V + + Sbjct: 596 --KVGFQFDRLLVLDVTDKQKLIVSAKQSLLQAASSLPSDISQLQPQSVIPGYVANITDR 653 Query: 465 GATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 G V + G + + + V D + SVG V A+ V SL ++ Sbjct: 654 GCFVRFLGRLTGLASVPQVADEFVSDPSNHFSVGQSVRAQVLEVYHDTGKFSLCLK 709 Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 54/176 (30%), Positives = 89/176 (50%), Gaps = 15/176 (8%) Query: 195 VKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERT 253 ++G VK+ + G F+ L VD ++ +++ VK P+E G I +++ D + Sbjct: 1233 LQGFVKSTSKKGCFISLAPQVDAIVLTCNLSKAFVKDPAESFPPGKLIKGRIINIDADLG 1292 Query: 254 RVSLGLKQLGEDPWVA---IAKRY---PEGTKLTGRVTNLTDYGCFVEIEE-GVEGLVHV 306 RV + LK G+ + + +R+ EG + G + + +G FV IE+ V + H+ Sbjct: 1293 RVEMSLKTSGQKKELTSTLLGRRFGDFKEGEVVFGTIKRIEKFGIFVTIEQSSVVTMCHM 1352 Query: 307 SEM-DWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETH 361 SE+ D K+I K VGD V VL +D ++RISLGLK+ + ETH Sbjct: 1353 SEVADHYFKDI--DKHYKVGDRVRARVLKVDNTKQRISLGLKES----YFSNTETH 1402 Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 47/178 (26%), Positives = 89/178 (50%), Gaps = 16/178 (8%) Query: 275 PEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLD 334 P L G V + + GCF+ + V+ +V + P++ G +++ +++ Sbjct: 1228 PLCLVLQGFVKSTSKKGCFISLAPQVDAIVLTCNLSKAFVK-DPAESFPPGKLIKGRIIN 1286 Query: 335 IDEERRRISLGLKQCKANPWQQFAET--------HNKGDRVEGKIKSITDFGIFIGLD-G 385 ID + R+ + LK + ++ T +G+ V G IK I FGIF+ ++ Sbjct: 1287 IDADLGRVEMSLKT--SGQKKELTSTLLGRRFGDFKEGEVVFGTIKRIEKFGIFVTIEQS 1344 Query: 386 GIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNN 443 + + H+S+++ + ++ + YK GD + A VL+VD ++RISLG+K E F+N Sbjct: 1345 SVVTMCHMSEVADHYF-KDIDKHYKVGDRVRARVLKVDNTKQRISLGLK---ESYFSN 1398 Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 58/218 (26%), Positives = 96/218 (44%), Gaps = 37/218 (16%) Query: 156 VIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVD-LGGV 214 V+ + K+ +V ++++++++ +S D + LQ + G V N+TD G FV LG + Sbjct: 606 VLDVTDKQKLIVSAKQSLLQAASSLPSD--ISQLQPQSVIPGYVANITDRGCFVRFLGRL 663 Query: 215 DGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQ------------- 261 GL + +A + V PS +VG + +VL+ + + SL LKQ Sbjct: 664 TGLASVPQVADEFVSDPSNHFSVGQSVRAQVLEVYHDTGKFSLCLKQSVCFSTDVSLIQG 723 Query: 262 --LGEDPWVAI--------AKRYPEGTKLTGRVTNLTDYGCFVEIE--EGVEGLVHVSEM 309 L ED V AK G G V + DYG V++ + V G V ++ Sbjct: 724 YFLEEDKIVEASEASDLEWAKTLAIGACTGGEVQEIKDYGVIVKLPNYKDVVGFVTHYQL 783 Query: 310 DWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLK 347 V VGD V+ VLD+ + R + L ++ Sbjct: 784 ---------GTPVEVGDSVQARVLDVVKADRIVDLTVR 812 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 41/185 (22%), Positives = 79/185 (42%), Gaps = 8/185 (4%) Query: 367 VEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAER 426 ++G +KS + G FI L +D +V ++S + A + G I ++ +DA+ Sbjct: 1233 LQGFVKSTSKKGCFISLAPQVDAIVLTCNLSKAFVKDPA-ESFPPGKLIKGRIINIDADL 1291 Query: 427 ERISLGVK------QLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVEL-ADGVEGYLR 479 R+ + +K +L K+G +V G + ++ G V + V Sbjct: 1292 GRVEMSLKTSGQKKELTSTLLGRRFGDFKEGEVVFGTIKRIEKFGIFVTIEQSSVVTMCH 1351 Query: 480 ASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQED 539 SE + +D VGD V A+ VD + ISL ++ ++ + + V +++D Sbjct: 1352 MSEVADHYFKDIDKHYKVGDRVRARVLKVDNTKQRISLGLKESYFSNTETHVQPVTEEDD 1411 Query: 540 ANFSN 544 +N Sbjct: 1412 MKVTN 1416 Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust. Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 16/135 (11%) Query: 129 AFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLEN 188 +F PG L+ R + L E+ K ++ + ++ RR + Sbjct: 1273 SFPPGKLIKGRIINIDADLGRVEMSLKTSGQKKELTSTLLGRR--------------FGD 1318 Query: 189 LQEGMEVKGIVKNLTDYGAFVDL--GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVL 246 +EG V G +K + +G FV + V + H++++A K + VGD + +VL Sbjct: 1319 FKEGEVVFGTIKRIEKFGIFVTIEQSSVVTMCHMSEVADHYFKDIDKHYKVGDRVRARVL 1378 Query: 247 KFDRERTRVSLGLKQ 261 K D + R+SLGLK+ Sbjct: 1379 KVDNTKQRISLGLKE 1393 Score = 43.5 bits (101), Expect = 0.024, Method: Compositional matrix adjust. Identities = 79/362 (21%), Positives = 151/362 (41%), Gaps = 38/362 (10%) Query: 13 LKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAE---QFKNAQGELEIQVGDEVD 69 L + +P V G V+A++ LV ++ P + +F+ + + QVG ++ Sbjct: 361 LSHADVQPAMNVTGTVIAVEPYGALVQLAEGVKALCPLQHMSEFQRSNPSSKFQVGSKLK 420 Query: 70 VALDAVEDGFGETLLSREKA---KRHEAWITLEKAYEDAETVTGVING-KVKGGFTVELN 125 + + + + L+ +K + ++ E A E T G I G + G F N Sbjct: 421 FRVLSCDHHAKKITLTHKKTLITSKLSPIVSYESAVEGLVT-HGFITGIEDIGCFVSFYN 479 Query: 126 GIRAFLPGSLVDVRP--VRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERD 183 ++ + S + + + + G+ ++ +V++ D +RR + ++ RD Sbjct: 480 DVKGLVHKSALGIEAGVKAENVFQVGQSIKCRVLRSDP------AARRLSLSFITTSSRD 533 Query: 184 QLLENLQE----GMEVKGIVKNLTDYGAFVDLGGVDGLL-------HITDMAWKRVKHPS 232 E G V G V ++ D V++ GL+ H++D ++ Sbjct: 534 DASEGAAGDELIGKVVAGTVHHVNDSVIIVNVSTPTGLVKGYLTFPHLSD-TLGHIEQLK 592 Query: 233 EIVNVGDEI-TVKVLKF-DRERTRVSL--GLKQLGEDPWVAIAKRYPEGTKLTGRVTNLT 288 + VG + + VL D+++ VS L Q I++ P+ + G V N+T Sbjct: 593 SVTKVGFQFDRLLVLDVTDKQKLIVSAKQSLLQAASSLPSDISQLQPQSV-IPGYVANIT 651 Query: 289 DYGCFVEIEEGVEGLVHVSEM--DWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGL 346 D GCFV + GL V ++ ++ + PS +VG V VL++ + + SL L Sbjct: 652 DRGCFVRFLGRLTGLASVPQVADEFVSD---PSNHFSVGQSVRAQVLEVYHDTGKFSLCL 708 Query: 347 KQ 348 KQ Sbjct: 709 KQ 710 >UniRef50_B9WAR4 rRNA biogenesis protein, putative n=5 Tax=Saccharomycetales RepID=B9WAR4_CANDC Length = 1715 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 61/215 (28%), Positives = 107/215 (49%), Gaps = 22/215 (10%) Query: 233 EIVNVGDEITVKVLKFDRERTRVSLGLK--QLGEDPWVAIAKRYPEGTKLTGRVTNLTDY 290 + NV D ++ KVL D R+S+ L+ + D + G + G V N+++ Sbjct: 1105 HVFNVNDYVSAKVLDIDSINKRISVSLRTNKPTSDKVINSVGDLTRGQVIKGFVKNISNN 1164 Query: 291 GCFVEIEEGVEGLVHVSEM------DWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISL 344 G +V + + LV VS++ DW N P++ V +G +V ++ RI + Sbjct: 1165 GVYVSLGRSIYALVRVSDLSDSYLKDWQNF-FKPNQPV-IGKIVNC------KQEGRILM 1216 Query: 345 GLKQCKANPWQQFAETHNK---GDRVEGKIKSITDFGIFIGLDGGID--GLVHLSDISWN 399 LK+ + N + +T + GD EG + S T+FG+F+ LDG ++ GL H S+IS N Sbjct: 1217 TLKESEVNGDLKIMKTFDDLQIGDIFEGTVTSTTEFGVFVKLDGTVNVSGLCHHSEISEN 1276 Query: 400 VAGEEAVREYKKGDEIAAVVLQVDAERERISLGVK 434 + + GD + +L++D + ++SLG+K Sbjct: 1277 DV-DNVKSLFGTGDRVKVKILKIDPVKRQLSLGMK 1310 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 3/78 (3%) Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLGG---VDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 ++LQ G +G V + T++G FV L G V GL H ++++ V + + GD + Sbjct: 1233 FDDLQIGDIFEGTVTSTTEFGVFVKLDGTVNVSGLCHHSEISENDVDNVKSLFGTGDRVK 1292 Query: 243 VKVLKFDRERTRVSLGLK 260 VK+LK D + ++SLG+K Sbjct: 1293 VKILKIDPVKRQLSLGMK 1310 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 90/399 (22%), Positives = 174/399 (43%), Gaps = 36/399 (9%) Query: 155 KVIKLDQKRNNVVVSRRA-VIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG 213 +VI ++ N +++S + VI++E RD + L +E I+K L D G +++ Sbjct: 462 RVIGFNEVDNLLILSFESKVIDAEYLNVRDVPIGKLLPNVE---ILKVLED-GVGINVKF 517 Query: 214 VD---GLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSL--GLKQLGEDPWV 268 D G + M+ ++ +P VG + ++L ++ +R ++ L L +D + Sbjct: 518 FDEFKGFVPGNQMSDIKLVYPERKFRVGTKTKGRLLNYNGKRALITFRKALVNLEDDEIL 577 Query: 269 AIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVV 328 + + G K V GC V + + +E+ T S + VG +V Sbjct: 578 SNIDQAEIGFKTNAIVEKFVPNGCIVSFFGNLRAFLPKTEISETFVE-DASSYLKVGQIV 636 Query: 329 EVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGK--IKSI----TDFGIFIG 382 +V +LDI++E++R+ + LKQ Q E + V GK +K++ T + + Sbjct: 637 KVRILDINKEQKRLVVTLKQSSELSNAQKNEINK---LVSGKSIVKTVIVEKTKDSVLVE 693 Query: 383 LDGG-IDGLVH---LSDISWNVAGEEAVREYKKGDEIAAVVLQVDAE-RERISLGVKQLA 437 L+G + G+++ LSD ++ + G+ + ++L D + R I+ K L Sbjct: 694 LEGSHLRGVIYDGQLSDGNYE-QNRALAKRLTIGESLEVLILDKDLKARTVIATAKKSLI 752 Query: 438 ED------PFN-NWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVED 490 E P + N V +N A+V G V +V + G V + G + A +++ ED Sbjct: 753 EALKSKSFPVDFNDVTVN---AVVKGYVKSVTSLGLFVTFTGRLTGLILAKYVTKNAKED 809 Query: 491 ATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKD 529 + + + VD++N L++ + KD Sbjct: 810 LSKKFYKYQSINCRVLSVDKENERFLLALNNSSSSFTKD 848 >UniRef50_C9SZ75 rRNA biogenesis protein RRP5 n=5 Tax=Sordariomycetes RepID=C9SZ75_VERA1 Length = 1789 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 93/358 (25%), Positives = 165/358 (46%), Gaps = 34/358 (9%) Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSEIVN--VGDEIT 242 LE+L+ G V N + G + ++ V G ++ D++ K I N +G + Sbjct: 1022 LEDLEVGSTHVAFVNNASRNGLWANISPVVRGRINAMDVSDDTSKINDVINNFPIGTALK 1081 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIA-KRYPEGTKLTGRVTNLTDYGCFVEIEEGVE 301 V+V+ D +R + L + D A+ L G V + + V++ V Sbjct: 1082 VRVIAVDAKRGVLDLSARS---DSSAAVTWDSIKPNQVLAGCVVKVNERQIMVKLGSNVA 1138 Query: 302 GLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCK----ANPWQQF 357 G VH+ +M +++ K + GD ++V V+++D+ +R+ L + + ++P Sbjct: 1139 GHVHLVDMSDDFGDVNTLKY-DEGDAIQVSVVEVDKSNKRVRLSTRPSRVLNSSSPITDS 1197 Query: 358 AETHNK----GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGD 413 T K G V G +K + D G+F+ L G + LV +S++S + ++E+K+ Sbjct: 1198 EITSVKQVVSGSTVRGFVKHVADKGVFVLLGGSVSALVKISNLS-----DRFLKEWKEHF 1252 Query: 414 EIAAVV----LQVDAERERISLGVKQLAEDPFNNWVALN-----KKGAIVTGKVTAVDAK 464 ++ +V L VD ++ L +K D +N+ L K IVTGK+ V+ Sbjct: 1253 QVDQLVKGRVLSVDEGAGQVELSLKSSVVD--DNYKPLKTYKDIKPNQIVTGKIRKVEDF 1310 Query: 465 GA--TVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 GA V+ +D V G SE + VEDA + GD V+AK +DR + IS ++ Sbjct: 1311 GAFIVVDGSDNVSGLCHRSEMADSPVEDARKLYQAGDVVKAKVLTLDRNKKRISFGLK 1368 Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 84/327 (25%), Positives = 148/327 (45%), Gaps = 33/327 (10%) Query: 213 GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAK 272 G+ G +H T A R++HP + G + +VL + ++ L LK+ + I K Sbjct: 569 GITGYVHETHFADVRLQHPEKKFREGMTVKARVLSVRPRKRQMRLTLKKTLVNSDTPIIK 628 Query: 273 RYPE---GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIH-PSKVVNVGDVV 328 + E G + G +++++ +G +E +GV G + VS+M + I P + VG VV Sbjct: 629 SFDEVEVGQQALGTISDISPHGARIEFYKGVRGWLPVSQM--SEAFIQDPKEHFKVGQVV 686 Query: 329 EVMVLDIDEERRRISLGLKQCKANPWQQFA--ETHNKGDRVEGKIKSITDFGIFIGLDG- 385 V +L++D E +++ + K A + A + + G V GK+ +D + + LDG Sbjct: 687 NVHILEVDPENQKLLVSCKDPSAFGLDKQAALKALSVGSIVSGKVIQKSDDDVHVELDGS 746 Query: 386 ---GIDGLVHLSDISWNVAGEEAVREYKKGDEIA-AVVLQVDAERERISLGVK-QLAE-- 438 I L L+D S N + A++ G + +VL + R I+L K L E Sbjct: 747 NLKAILPLGQLTDKSAN-KSQSALKRIHMGQTLTDLLVLDKNERRRAITLSSKPSLVEAG 805 Query: 439 --DPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLS 496 D A K GA V G ++++ V + G + + L Sbjct: 806 KTDKLIRTYADAKVGAEVPGFISSIRPGAVLVRFGGNLVGVMFKTR------------LP 853 Query: 497 VGDEVEAKFTGVDRKNRAISLSVRAKD 523 V D+ + F G+ RK+++I++ +RA D Sbjct: 854 VEDQEKEGF-GL-RKDQSITVRIRAID 878 Score = 58.2 bits (139), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 64/262 (24%), Positives = 118/262 (45%), Gaps = 25/262 (9%) Query: 19 RPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE---LEIQVGDEVDVALDAV 75 +P ++ G VV +++ ++V G + + G+ L+ GD + V++ V Sbjct: 1112 KPNQVLAGCVVKVNERQIMVKLGSNVAGHVHLVDMSDDFGDVNTLKYDEGDAIQVSVVEV 1171 Query: 76 EDGFGETLLSREKAKRHEAWITLEKAYEDAE--TVTGVINGKVKGGFT--VELNGIRAFL 131 + LS R + D+E +V V++G GF V G+ L Sbjct: 1172 DKSNKRVRLS----TRPSRVLNSSSPITDSEITSVKQVVSGSTVRGFVKHVADKGVFVLL 1227 Query: 132 PGS---LVDVRPVRDTLHLEGKE-------LEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 GS LV + + D E KE ++ +V+ +D+ V +S ++ + +N Sbjct: 1228 GGSVSALVKISNLSDRFLKEWKEHFQVDQLVKGRVLSVDEGAGQVELSLKSSVVDDNYKP 1287 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVD---GLLHITDMAWKRVKHPSEIVNVG 238 + ++++ V G ++ + D+GAF+ + G D GL H ++MA V+ ++ G Sbjct: 1288 L-KTYKDIKPNQIVTGKIRKVEDFGAFIVVDGSDNVSGLCHRSEMADSPVEDARKLYQAG 1346 Query: 239 DEITVKVLKFDRERTRVSLGLK 260 D + KVL DR + R+S GLK Sbjct: 1347 DVVKAKVLTLDRNKKRISFGLK 1368 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 110/532 (20%), Positives = 210/532 (39%), Gaps = 84/532 (15%) Query: 49 PAEQFKNAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETV 108 P E FK VG V+V + V+ + L+S K A+ ++A A +V Sbjct: 676 PKEHFK---------VGQVVNVHILEVDPENQKLLVS---CKDPSAFGLDKQAALKALSV 723 Query: 109 TGVINGKV----KGGFTVELNG--IRAFLP-GSLVD-----VRPVRDTLHLEGKELEFKV 156 +++GKV VEL+G ++A LP G L D + +H+ + V Sbjct: 724 GSIVSGKVIQKSDDDVHVELDGSNLKAILPLGQLTDKSANKSQSALKRIHMGQTLTDLLV 783 Query: 157 IKLDQKRNNVVVSRR-AVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG-V 214 + +++R + +S + +++E+ + + + + + G EV G + ++ V GG + Sbjct: 784 LDKNERRRAITLSSKPSLVEAGKTDKLIRTYADAKVGAEVPGFISSIRPGAVLVRFGGNL 843 Query: 215 DGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVA----- 269 G++ T + + + + ITV++ D ERTR+ + DP A Sbjct: 844 VGVMFKTRLPVEDQEKEGFGLRKDQSITVRIRAIDLERTRLVV-------DPLTAELPSN 896 Query: 270 --IAKRYPE---------------GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEM--- 309 K+ E G + ++ + D VE + V+G V +S++ Sbjct: 897 EVKPKKEKESARPQAHGPVQDITFGQIVEAKIVGIHDTQLNVETADKVQGRVDISQIFDS 956 Query: 310 -DWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVE 368 D P GD V V + + + + L N +F K +E Sbjct: 957 WDKIKDPEEPLSQFKKGDTVRVRAIGLHDSKDHRFLAFSHRSYNSVLEFTA---KASDIE 1013 Query: 369 G---KIKSITDF----------------GIFIGLDGGIDGLVHLSDISWNVAG-EEAVRE 408 K S+ D G++ + + G ++ D+S + + + + Sbjct: 1014 ADVLKPLSLEDLEVGSTHVAFVNNASRNGLWANISPVVRGRINAMDVSDDTSKINDVINN 1073 Query: 409 YKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATV 468 + G + V+ VDA+R + L + + W ++ K ++ G V V+ + V Sbjct: 1074 FPIGTALKVRVIAVDAKRGVLDLSARSDSSAAVT-WDSI-KPNQVLAGCVVKVNERQIMV 1131 Query: 469 ELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 +L V G++ + S D + TL GD ++ VD+ N+ + LS R Sbjct: 1132 KLGSNVAGHVHLVDMSDDFGDVNTLKYDEGDAIQVSVVEVDKSNKRVRLSTR 1183 >UniRef50_B8D058 RNA binding S1 domain protein n=60 Tax=cellular organisms RepID=B8D058_HALOH Length = 722 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 36/76 (47%), Positives = 56/76 (73%), Gaps = 1/76 (1%) Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 +E+L+ GM ++G V+N+ D+GAFVD+G VDGL+HI++M+ V P ++V VGD + VK Sbjct: 646 MEDLEAGMLLQGTVRNVVDFGAFVDIGVKVDGLVHISEMSHDYVDDPLKVVQVGDTVKVK 705 Query: 245 VLKFDRERTRVSLGLK 260 +L+ D R R+SL +K Sbjct: 706 ILEVDERRNRISLSMK 721 Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 37/73 (50%), Positives = 49/73 (67%), Gaps = 5/73 (6%) Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEM--DWTNKNIHPSKVVNVGDVVEVMVLD 334 G L G V N+ D+G FV+I V+GLVH+SEM D+ + P KVV VGD V+V +L+ Sbjct: 652 GMLLQGTVRNVVDFGAFVDIGVKVDGLVHISEMSHDYVD---DPLKVVQVGDTVKVKILE 708 Query: 335 IDEERRRISLGLK 347 +DE R RISL +K Sbjct: 709 VDERRNRISLSMK 721 Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 46/71 (64%), Gaps = 1/71 (1%) Query: 364 GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVD 423 G ++G ++++ DFG F+ + +DGLVH+S++S + ++ ++ + GD + +L+VD Sbjct: 652 GMLLQGTVRNVVDFGAFVDIGVKVDGLVHISEMSHDYV-DDPLKVVQVGDTVKVKILEVD 710 Query: 424 AERERISLGVK 434 R RISL +K Sbjct: 711 ERRNRISLSMK 721 Score = 43.9 bits (102), Expect = 0.015, Method: Compositional matrix adjust. Identities = 27/70 (38%), Positives = 39/70 (55%) Query: 451 GAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDR 510 G ++ G V V GA V++ V+G + SE S D V+D V+ VGD V+ K VD Sbjct: 652 GMLLQGTVRNVVDFGAFVDIGVKVDGLVHISEMSHDYVDDPLKVVQVGDTVKVKILEVDE 711 Query: 511 KNRAISLSVR 520 + ISLS++ Sbjct: 712 RRNRISLSMK 721 >UniRef50_B2XT45 30S ribosomal protein S1 n=2 Tax=Heterosigma akashiwo RepID=B2XT45_HETA2 Length = 269 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 64/268 (23%), Positives = 127/268 (47%), Gaps = 21/268 (7%) Query: 1 MTESFAQLFEESLKEI-------ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQF 53 M+ +F FE S E+ + G I+ G V++ +K L+D G K + +P+ + Sbjct: 1 MSINFTSNFENSFFELLFKKYNYQFSKGDIIAGKVISFEKFGTLIDIGAKVLAYLPSSEI 60 Query: 54 KNAQGELEIQV---GDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTG 110 + Q L Q+ G+ ++ L ++S ++ K W L++ + ++G Sbjct: 61 SSFQAFLTKQLLNRGELLEFVLTDYRPNKKTLIISLKQLKSIITWQRLKELIREDLILSG 120 Query: 111 VINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVS- 169 + K G + LNG++ F+ S + R L L K ++L + +N +++S Sbjct: 121 QVKKSTKQGKLIILNGLKGFVLNSHLPKYYRRK--QLTKLHLPLKFLELSEGKNKILLSC 178 Query: 170 RRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVK 229 + A +++ + + Q + G + ++ YG FV++ G+ GLLHI++++ +R+ Sbjct: 179 KLAHFKNQTNFLKPQ--------QVIMGCITDIKSYGLFVNIYGLKGLLHISEISSQRID 230 Query: 230 HPSEIVNVGDEITVKVLKFDRERTRVSL 257 + S+ G I V VL + R R+SL Sbjct: 231 NLSKRFQKGQLIQVTVLYINLNRGRISL 258 Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 58/249 (23%), Positives = 111/249 (44%), Gaps = 18/249 (7%) Query: 195 VKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERT 253 + G V + +G +D+G V L ++++ + +++N G+ + + + + Sbjct: 31 IAGKVISFEKFGTLIDIGAKVLAYLPSSEISSFQAFLTKQLLNRGELLEFVLTDYRPNKK 90 Query: 254 RVSLGLKQLGED-PWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWT 312 + + LKQL W + + E L+G+V T G + I G++G V S + Sbjct: 91 TLIISLKQLKSIITWQRLKELIREDLILSGQVKKSTKQGKLI-ILNGLKGFVLNSHLPKY 149 Query: 313 NKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIK 372 + +K+ + + L++ E + +I L CK ++ + G I Sbjct: 150 YRRKQLTKLH-----LPLKFLELSEGKNKILLS---CKLAHFKNQTNFLKPQQVIMGCIT 201 Query: 373 SITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLG 432 I +G+F+ + G + GL+H+S+IS + R ++KG I VL ++ R RISL Sbjct: 202 DIKSYGLFVNIYG-LKGLLHISEISSQRIDNLSKR-FQKGQLIQVTVLYINLNRGRISLT 259 Query: 433 VKQLAEDPF 441 K PF Sbjct: 260 AK-----PF 263 >UniRef50_UPI000194C80A PREDICTED: programmed cell death 11 n=2 Tax=Taeniopygia guttata RepID=UPI000194C80A Length = 1885 Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 95/371 (25%), Positives = 159/371 (42%), Gaps = 48/371 (12%) Query: 187 ENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGL---LHITDMAWKRVKHPSEIVNVGDEIT 242 +++ G V+G V +L G V + G+ GL LH++D+ +K P + N+GDE+ Sbjct: 501 QDIHTGDVVQGKVLSLKPIGMQVKVADGIRGLVPSLHLSDVI---LKQPEKKYNIGDEVK 557 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPE---GTKLTGRVTNLTDYGCFVEIEEG 299 +VL+ + E ++ L LK+ + + Y + G G V ++GC V+ Sbjct: 558 CRVLECNPEGKKLILTLKKSLVQSKLPVLSNYEDAKPGLITHGFVVCAREFGCIVKFYND 617 Query: 300 VEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLK-QCKANPWQQFA 358 V+GLV +E+ + P KV G V++VMVL + ++ R+ L + K P ++ Sbjct: 618 VKGLVPKNELGSEPISC-PDKVFYEGQVLKVMVLKCEPQQERLLLSFRLSSKPGPEDKWK 676 Query: 359 ETHNKGDRVEGKIKSITDFGIFIGLDGGID--------------GLVHLSD------ISW 398 T + V+ +I I D I D G++ ++HLSD + W Sbjct: 677 CTPKEKQEVKYQIGEIVDVRILKKKDNGLEVSILEDEDNVVAWIPMLHLSDFVDISKLLW 736 Query: 399 NVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLA------EDPFNNWVALNKKGA 452 + E GD + VL + A+ E + L K E N+ + + G Sbjct: 737 HCLRE--------GD-VLPRVLYLSAKGEHLILSRKSAVISAVQEEKVVRNFSEI-QPGM 786 Query: 453 IVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKN 512 ++TG V V G VE GV G S V D VG V AK D + Sbjct: 787 LLTGYVRNVMPFGVFVEFPFGVTGLAPKVSMSDKFVTDTKDHFVVGQTVIAKVMSTDEEK 846 Query: 513 RAISLSVRAKD 523 + + L+++ + Sbjct: 847 QRVLLNLKVSE 857 Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 66/243 (27%), Positives = 105/243 (43%), Gaps = 34/243 (13%) Query: 212 GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSL---GLKQLGEDPWV 268 G V LL ++ K +KHP + G I+ V D + L G++ L +D Sbjct: 1222 GRVPHLL--LSLSTKVLKHPEKSFKNGQAISATVTGTDATERNLCLSLTGIQSLEQD--- 1276 Query: 269 AIAKRYPEGTKLTGRVTNLTDY-GCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDV 327 T G VT +T + G + + G G V + ++ T + +P VG + Sbjct: 1277 ---------TISVGMVTKVTPHVGLTIALPGGKTGKVSIFHLNDTYTD-NPLGNFKVGKI 1326 Query: 328 VEVMVLDIDEERRRISLGLKQCKANP-----WQQFAETH----NKGDRVEGKIKSITDFG 378 V +L I E +I L L+Q + NP + T KG V G +KSIT G Sbjct: 1327 VRCYILSI--ENGKIQLSLRQSRLNPKINSKVEDIEITSIKDVKKGQLVRGYVKSITPSG 1384 Query: 379 IFIGLDGGIDGLVHLSDIS-WNVAGEEAVREY-KKGDEIAAVVLQVDAERERISLGVKQL 436 +F GL + G + ++S + V ++Y +G + A VL V+ + + I L + L Sbjct: 1385 VFFGLSTSLLGRILFQNVSPYFVQKHSLYKKYLPEGKLLTAKVLGVNRKEKHIELSL--L 1442 Query: 437 AED 439 ED Sbjct: 1443 PED 1445 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/110 (30%), Positives = 60/110 (54%), Gaps = 6/110 (5%) Query: 155 KVIKLDQKRNNVVVSRRAVIESENSAERDQLLEN---LQEGMEVKGIVKNLTDYGAFVDL 211 +V+ L K ++++SR++ + S + + ++++ N +Q GM + G V+N+ +G FV+ Sbjct: 747 RVLYLSAKGEHLILSRKSAVIS--AVQEEKVVRNFSEIQPGMLLTGYVRNVMPFGVFVEF 804 Query: 212 G-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLK 260 GV GL M+ K V + VG + KV+ D E+ RV L LK Sbjct: 805 PFGVTGLAPKVSMSDKFVTDTKDHFVVGQTVIAKVMSTDEEKQRVLLNLK 854 >UniRef50_A8PVH2 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS 7966 RepID=A8PVH2_MALGO Length = 1217 Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 64/226 (28%), Positives = 111/226 (49%), Gaps = 38/226 (16%) Query: 234 IVNVGDEITVKVLKFDRERTR--VSLGLKQLG---------EDPWVAIAKRYPEGTKLTG 282 + +VGD+ T VL ++R VS+ +L +DP V + G + G Sbjct: 846 LPDVGDQCTCIVLSVRKKRREADVSIRPSRLAPSDDVNASVDDPVVDSTAQLEIGMHIRG 905 Query: 283 RVTNLTDYGCFVEIEEGVEGLVHVSEM------DWTNKNIHPSKVVNVGDVVEVMVLDID 336 V +T++G +V + + V + E+ D+ K VG V +L I Sbjct: 906 LVKAVTNHGVYVSLGPHTDARVMIKELFDEYVKDFRTK-------FQVGQCVRGTILQI- 957 Query: 337 EERRRISLGLKQCK-------ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGG-ID 388 E +I L LK+ + A W + E G++V+ ++ IT++GIF+ +DG + Sbjct: 958 EPNGQIELSLKKSRLEGVKPSAGAWSKIHE----GEKVKAHVRGITEYGIFLQVDGTDVS 1013 Query: 389 GLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVK 434 GL H S++S N + A+R + GD + AVVL++DA++ R++ G+K Sbjct: 1014 GLCHKSELSDNKSAN-AIRAFAVGDRVKAVVLKMDADKRRVAFGLK 1058 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 62/216 (28%), Positives = 113/216 (52%), Gaps = 14/216 (6%) Query: 144 TLHLEGKELEFKVIKLDQKRN----NVVVSRRAVIESENSAERDQLLEN---LQEGMEVK 196 TL G + V+ + +KR ++ SR A + N++ D ++++ L+ GM ++ Sbjct: 845 TLPDVGDQCTCIVLSVRKKRREADVSIRPSRLAPSDDVNASVDDPVVDSTAQLEIGMHIR 904 Query: 197 GIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRV 255 G+VK +T++G +V LG D + I ++ + VK VG + +L+ + ++ Sbjct: 905 GLVKAVTNHGVYVSLGPHTDARVMIKELFDEYVKDFRTKFQVGQCVRGTILQIE-PNGQI 963 Query: 256 SLGLKQL---GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE-EGVEGLVHVSEMDW 311 L LK+ G P + EG K+ V +T+YG F++++ V GL H SE+ Sbjct: 964 ELSLKKSRLEGVKPSAGAWSKIHEGEKVKAHVRGITEYGIFLQVDGTDVSGLCHKSELS- 1022 Query: 312 TNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLK 347 NK+ + + VGD V+ +VL +D ++RR++ GLK Sbjct: 1023 DNKSANAIRAFAVGDRVKAVVLKMDADKRRVAFGLK 1058 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 89/379 (23%), Positives = 147/379 (38%), Gaps = 65/379 (17%) Query: 192 GMEVKGIVKNLTDYGAFVDLGG-VDGL---LHITDMAWKRVKHPSEIVNVGDEITVKVLK 247 G V+ ++ +T FV + G VDG+ +H +D+ R+ HP + E+ +++ Sbjct: 539 GQVVRVSIRKVTPKAIFVRMNGNVDGVVFPMHFSDV---RLTHPEKKYKPNLELKARIIH 595 Query: 248 FDRERTRVSLGLKQ---LGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLV 304 D R R+ L LK+ + P +A + G V VE+ + +V Sbjct: 596 TDPMRNRIVLTLKRSLITSDLPLLAKLEDVRVGVVTNAVVLKQLPASMLVELGGTLRAVV 655 Query: 305 HVSEMDWTNKNIHPSKVVN-VGDVVEVMVLDIDEERRRISLGLKQCKANPWQQF-AETHN 362 +E T +N G VV+V + + E RI +KQ + Q+ + + Sbjct: 656 PFAEASDTAMTSEQLGELNPTGKVVKVRITKFEPETGRIMASMKQASSVYLQRLNVDAVD 715 Query: 363 KGDRVEGKIKSIT-DFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQ 421 G+RV + D I + G L+ L D+S R+ + Sbjct: 716 VGERVAARFAGWQDDVAILVLEPSGTRALLSLHDLS---------RQRR----------- 755 Query: 422 VDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGA--TVE---------- 469 VDA++ R SL +L D + + KK A+ V + ++ A TVE Sbjct: 756 VDADKVRASLAANELLSDLY-----VAKKNAVKGYVVLSYESPDASKTVEVGGRYEARVV 810 Query: 470 -------------LADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAIS 516 L L A+E S D + +ATL VGD+ V +K R Sbjct: 811 ETHHDKLYSLVSLLGTPCRARLHATECS-DSLANATLP-DVGDQCTCIVLSVRKKRREAD 868 Query: 517 LSVRAKDEADEKDAIATVN 535 +S+R A D A+V+ Sbjct: 869 VSIRPSRLAPSDDVNASVD 887 >UniRef50_D1B1Y3 Tex-like protein protein-like protein n=2 Tax=delta/epsilon subdivisions RepID=D1B1Y3_SULD5 Length = 704 Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 35/79 (44%), Positives = 59/79 (74%), Gaps = 2/79 (2%) Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEIT-V 243 + L EG V G+V+N+ D+GAFVD+G DGL+HI+ M+ KR+ HP E++++ ++T + Sbjct: 626 ISELSEGSIVSGVVRNIADFGAFVDIGLKNDGLIHISQMSEKRIAHPLEVLSINQQLTRI 685 Query: 244 KVLKFDRERTRVSLGLKQL 262 +VL+ D+E+ +VSL LK++ Sbjct: 686 RVLEVDKEKGKVSLSLKEI 704 Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 28/75 (37%), Positives = 52/75 (69%), Gaps = 4/75 (5%) Query: 276 EGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNI-HPSKVVNVG-DVVEVMVL 333 EG+ ++G V N+ D+G FV+I +GL+H+S+M + K I HP +V+++ + + VL Sbjct: 631 EGSIVSGVVRNIADFGAFVDIGLKNDGLIHISQM--SEKRIAHPLEVLSINQQLTRIRVL 688 Query: 334 DIDEERRRISLGLKQ 348 ++D+E+ ++SL LK+ Sbjct: 689 EVDKEKGKVSLSLKE 703 >UniRef50_B8PP03 Predicted protein (Fragment) n=1 Tax=Postia placenta Mad-698-R RepID=B8PP03_POSPM Length = 1088 Score = 77.8 bits (190), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 87/363 (23%), Positives = 166/363 (45%), Gaps = 66/363 (18%) Query: 115 KVKGGFTVELNGIRAFLP-GSLVDVRPV-----RDTLHLEGKELEFKVIKLDQKRNNVVV 168 K K T++ +RA L +L + R V R +L + K + V+ + ++ V+V Sbjct: 428 KDKAVITLQPTQVRALLSLNNLANRRGVSLTQLRTSLKTDEKLQDLVVVSRNPEKGFVLV 487 Query: 169 SRRAVIESENSAERDQL-LENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMA-- 224 + + E E+ ++ L L+ +Q G V G V GA V L + G LH TD Sbjct: 488 ATKPK-EKESLLQKGSLNLDTIQVGQVVGGRVLRHGRQGALVKLTSSISGTLHPTDTCDD 546 Query: 225 --WKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPE------ 276 R P + + + VL DR++ +++L + ++ YP+ Sbjct: 547 FDSGRAFPPVDSI-----LKAVVLSIDRDKRQLTLSTRP---------SRLYPDQAKDVK 592 Query: 277 ------------GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEM------DWTNKNIHP 318 G + G + N+ ++G FV + ++ V + E+ DW + Sbjct: 593 DHEVDGVSDLKVGQTVRGFIKNVAEHGIFVMLGRHIDARVQIKELFDEYVKDWKSH---- 648 Query: 319 SKVVNVGDVVEVMVLDIDEERRRISLGLK----QCKANPWQQFAETHNKGDRVEGKIKSI 374 +V+ VL +D +++++ + + + A A+ ++G +V+G++K I Sbjct: 649 ---FAANQLVKGRVLSVDFDKKQVEMTFRSGDLKRDARSQSTLADL-SEGQKVDGRVKKI 704 Query: 375 TDFGIFIGLDGG-IDGLVHLSDISWNVAGE--EAVREYKKGDEIAAVVLQVDAERERISL 431 D+G+FI + G + GL H S++S N + A+R +++ D++ AV+L +D E+ RIS Sbjct: 705 EDYGLFIEIAGSKLSGLCHKSELSDNKDADVTLALRSFRENDQVKAVILSIDREKRRISF 764 Query: 432 GVK 434 G+K Sbjct: 765 GLK 767 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 95/410 (23%), Positives = 169/410 (41%), Gaps = 89/410 (21%) Query: 189 LQEGMEVKGIVKNLTDYGAFVDLGG-VDGLL---HITDMAWKRVKHPSEIVNVGDEITVK 244 +Q G +KG VK LT+ FV + G VDG++ H D+A +KHP G ++ Sbjct: 371 VQVGELIKGTVKRLTESALFVSMSGSVDGVVWPNHYADIA---LKHPQRRFRPGVVAELQ 427 Query: 245 ----VLKFDRERTRVSLGLKQLGEDPWVAIAK------------------RYPE------ 276 V+ + R L L L V++ + R PE Sbjct: 428 KDKAVITLQPTQVRALLSLNNLANRRGVSLTQLRTSLKTDEKLQDLVVVSRNPEKGFVLV 487 Query: 277 -----------------------GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEM--DW 311 G + GRV G V++ + G +H ++ D+ Sbjct: 488 ATKPKEKESLLQKGSLNLDTIQVGQVVGGRVLRHGRQGALVKLTSSISGTLHPTDTCDDF 547 Query: 312 TNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQ-QFAETH--------N 362 + P V +++ +VL ID ++R+++L + + P Q + + H Sbjct: 548 DSGRAFPP----VDSILKAVVLSIDRDKRQLTLSTRPSRLYPDQAKDVKDHEVDGVSDLK 603 Query: 363 KGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKK----GDEIAAV 418 G V G IK++ + GIF+ L ID V + ++ +E V+++K + Sbjct: 604 VGQTVRGFIKNVAEHGIFVMLGRHIDARVQIKELF-----DEYVKDWKSHFAANQLVKGR 658 Query: 419 VLQVDAERERISLGVKQ--LAEDPFN-NWVALNKKGAIVTGKVTAVDAKGATVELADG-V 474 VL VD +++++ + + L D + + +A +G V G+V ++ G +E+A + Sbjct: 659 VLSVDFDKKQVEMTFRSGDLKRDARSQSTLADLSEGQKVDGRVKKIEDYGLFIEIAGSKL 718 Query: 475 EGYLRASEASRDRVEDATLVLSV---GDEVEAKFTGVDRKNRAISLSVRA 521 G SE S ++ D TL L D+V+A +DR+ R IS ++ Sbjct: 719 SGLCHKSELSDNKDADVTLALRSFRENDQVKAVILSIDREKRRISFGLKP 768 >UniRef50_Q4PGT5 Putative uncharacterized protein n=1 Tax=Ustilago maydis RepID=Q4PGT5_USTMA Length = 1563 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 91/363 (25%), Positives = 168/363 (46%), Gaps = 62/363 (17%) Query: 120 FTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRR------AV 173 T+ G+RA L SL + +R+T +EL + ++ DQ+ ++VVS + + Sbjct: 781 LTLVPTGVRALL--SLSVLASMRNT---TSQEL-LESLEEDQEIEDLVVSAKNPAKGIVI 834 Query: 174 IESENSAERDQLLEN-------LQEGMEVKG--IVKNLTDYGAFVDLG-GVDGLLHITDM 223 + + + + + +EN +++G V+G I KN V LG LH+TD+ Sbjct: 835 VADKVRSSKSEDVENNGSTSGQVKQGNVVQGRVIQKNDKYLDCVVALGTATRATLHVTDL 894 Query: 224 A---WKRVKHPS-----EIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYP 275 A + V PS + V + K +RV+ DP ++ Sbjct: 895 ADDFSRNVSLPSPGQTLQCYIVSLKSNGKSAVISTRPSRVAASDSAEVTDPEISSISDLA 954 Query: 276 EGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEM------DWTNKNIHPSKVVNVGDVVE 329 +G K+ G V +T+ G FV + ++ V V E+ DW + VG VV Sbjct: 955 KGQKVRGFVKAITNVGLFVTVGRKLDARVQVRELFDEFVRDWKTR-------FTVGQVVS 1007 Query: 330 VMVLDIDEERRRISLGLKQCKAN--PWQQFAETH---------------NKGDRVEGKIK 372 ++D + I + LK + P + AE GD+V+G +K Sbjct: 1008 GTIMDTNVHNNEIEMSLKSTPGSIKPRAERAEERALLDAKKRPKRLADFKVGDKVKGFVK 1067 Query: 373 SITDFGIFIGLDG-GIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISL 431 +I FG+F+ ++G + GL H++++S + +EA++ ++ GD++ A+VL+++ E+++IS Sbjct: 1068 NIIGFGVFVQIEGTNVSGLAHMNELS-DGKADEALKAFRVGDKVRAIVLRINEEKKKISF 1126 Query: 432 GVK 434 G+K Sbjct: 1127 GLK 1129 >UniRef50_D1Z6Q4 Whole genome shotgun sequence assembly, scaffold_7 n=3 Tax=Sordariales RepID=D1Z6Q4_SORMA Length = 1776 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 89/360 (24%), Positives = 172/360 (47%), Gaps = 39/360 (10%) Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDL-----GGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 +NL+ G G V N+ +V+L G V+ + D++ + + ++ +G Sbjct: 1014 FDNLKVGSSYVGFVNNVGQGHLWVNLSPTVRGRVNAMEASDDVSL--LTNLAKNFPIGSA 1071 Query: 241 ITVKVLKFDRERTRVSLGLKQLG---EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE 297 + V+V+ D E R+ L + G E W IA + L G+VT + + V++ Sbjct: 1072 LRVRVVSVDAESKRLDLSARSPGSEDELTWDKIA----QDVILVGKVTKVDERQVIVKLS 1127 Query: 298 EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCK----ANP 353 E + G VH ++ + +P+K ++V V V+++D+ +RI L + + + P Sbjct: 1128 ETLAGPVHKVDLADDYEEANPAKFAK-NEIVRVAVVEVDKSNKRIRLSTRPSRILNSSLP 1186 Query: 354 WQ-QFAETHNK---GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREY 409 + + H K G+ V G +K+++D G+F+ L G + V + ++S + ++ + Sbjct: 1187 VKDKEIVQHTKLEVGEIVRGFVKNVSDKGLFVTLGGNVTAFVQIKNLS-----DAYLKYW 1241 Query: 410 KKGDEIAAVVLQ--VDAERERISLGVKQLAEDPFNNWVALN-----KKGAIVTGKVTAVD 462 K+ ++ +V V RI + +K D ++V L K+G +TG+V V+ Sbjct: 1242 KEQFQVDQLVKGRIVSVANGRIEMSLKPSVVD--KDYVPLTTISDLKEGQTITGRVRKVE 1299 Query: 463 AKGATVEL--ADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 GA +++ +D + G SE S V+DA + GD+V+AK VD + I+L ++ Sbjct: 1300 EFGAFIDIDGSDNLSGLCHRSEMSDKAVKDARKLYEEGDKVKAKVLKVDATAKRINLGLK 1359 Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 101/450 (22%), Positives = 202/450 (44%), Gaps = 61/450 (13%) Query: 80 GETLLSREKAKRHEAWITLEKAYEDAETVTGVI-----NGKVKGGFTVEL-NGIRAFLP- 132 G L+S EK+ + ++ +E A V+GV+ N GG V++ +GI +P Sbjct: 508 GMYLISLEKSVLEQPFLRIEDIPVGA-VVSGVVEKMVLNAAGVGGLIVKIADGISGLVPE 566 Query: 133 GSLVDVRPVRDTLHLEGKELEFK--------VIKLDQKRNNVVVS-RRAVIESENSAERD 183 DV HL+ E +F+ V+ D + ++ ++ ++ S+ A Sbjct: 567 MHFADV-------HLQNPEKKFREGLKVKARVLSTDAASRQIRLTLKKTLVNSDLPA--I 617 Query: 184 QLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 Q + + G + G + N+ +GA V G + G L +++M+ + P E VG ++ Sbjct: 618 QTYDEITVGQQALGTIINVLQHGAIVQFYGRLRGFLPVSEMSEAYIHDPKEHFRVGQTVS 677 Query: 243 VKVLKFDRERTRVSLGLKQ---LGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI-EE 298 + V+ FD + ++ + K G + +A+ K+ G ++ +VT TD FVE+ + Sbjct: 678 IYVISFDPDAAKLIVSCKDPAAFGLEKQLAL-KKLQIGDVVSAKVTQKTDDDVFVELADS 736 Query: 299 GVEGLVHVSEMDWTNKNIHPS----KVVNVGDVV-EVMVLDIDEERRRISLGLKQ--CKA 351 ++ ++ V+ + T+K++ + K ++V + E+++L+ +E RR I L K KA Sbjct: 737 SLKAILPVAHL--TDKSVSKTQSALKKIHVNQTLSELVILEKNEARRSIILSQKPILVKA 794 Query: 352 NPWQQFAETHNK---GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVRE 408 +F + + G+ V G +++IT +F+ G + L+ S I + Sbjct: 795 TKEGKFLTSLDGARVGEEVAGYVRNITATAVFVQFGGKLTALLPKSMIPKEDQDKPDFGM 854 Query: 409 YKKGDEIAAVVLQVDAERERISLGV--------------KQLAEDPFNNWVALN--KKGA 452 + K I + V+ E R+ + V ++LA + +L+ G Sbjct: 855 F-KSQSITVKITSVNNELNRLVVAVPGATEQVKRVDTKGEKLANPVDESITSLDDISIGK 913 Query: 453 IVTGKVTAVDAKGATVELADGVEGYLRASE 482 + +V +V V+LAD ++G + S+ Sbjct: 914 LTKARVVSVKDTQVNVQLADNIQGRIDVSQ 943 >UniRef50_B0CR68 Predicted protein n=3 Tax=Agaricales RepID=B0CR68_LACBS Length = 1468 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 113/490 (23%), Positives = 198/490 (40%), Gaps = 73/490 (14%) Query: 107 TVTGVINGKVKGGFTVEL--NGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQK-R 163 T+T + G+ ++L +G+ FL +RP G+ L+ V KL R Sbjct: 259 TMTAAVKSVEDHGYILDLGISGVEGFLAFKDTKMRPSGSIALDVGRLLDVSVTKLSANGR 318 Query: 164 NNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVD-LGGVDGLLHITD 222 V + +A+ S E + L G V+ ++ + G + LG +G + Sbjct: 319 TCNVTTDQALFSSSYVTEMSSVTSVL-PGALVQSLITAIHPTGLNLQVLGFFEGTVDPVH 377 Query: 223 MAWKRVKHPSEIVNVGDEITVKVL-KFDRERTRVSLGL--------------KQLGEDPW 267 + K + VG ++ ++L ++ R +L L K+L + Sbjct: 378 L-----KKGGKAYQVGKKVRARILYEYSSSPPRFALALVDHLTNLSAPCIKSKELPAETK 432 Query: 268 VAIAKRYPEGTKL-TGRVTNL-TDYGCFVEIEEGVEGLVHVSEMD------------WTN 313 +I + +P GT + + +V + T+ G VE++ GVEG VH+S + W Sbjct: 433 -SIQEAFPLGTIIESAKVLRVETERGIIVEVQPGVEGFVHISHLSEDHVPSLSSTGPWKP 491 Query: 314 KNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPW---QQFAETHNK--GDRVE 368 +H ++V D GL Q P Q+F + + G+ ++ Sbjct: 492 GTLHRARVTGY--------FSFD--------GLLQLSFKPSIIEQKFLQVSDVEVGEVIK 535 Query: 369 GKIKSITDFGIFIGLDGGIDGLV---HLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAE 425 G IK +TD G+F+ L IDG+V H +DI+ + + +K G I VL VD Sbjct: 536 GTIKKLTDSGLFVSLSRSIDGVVWPNHYADITL----KHPEKRFKPGAGIKCKVLAVDVY 591 Query: 426 RERISLGVKQLAED---PFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASE 482 R+RISL K+ D P + + K G + + V VE + ++ + A E Sbjct: 592 RKRISLTAKKTLLDSNLPILSKIDDAKPGFVTHAVIFKVYGNHLLVEFYNNLKAIVPAKE 651 Query: 483 ASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANF 542 S + + +G V + VD + I S+R KD ++ ++ E N Sbjct: 652 ISDIPINKLSDSFPIGRVVRTRIISVDTEQGRIVASIR--QALGNKDPVSDISAVEIGNI 709 Query: 543 SNNAMAEAFK 552 +++E K Sbjct: 710 VKGSISEIHK 719 Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 105/476 (22%), Positives = 202/476 (42%), Gaps = 76/476 (15%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ-GELE--IQVGDEVDVALD 73 + +PG + V+ + + +LV+ ++ +PA++ + +L +G V + Sbjct: 616 DAKPGFVTHAVIFKVYGNHLLVEFYNNLKAIVPAKEISDIPINKLSDSFPIGRVVRTRII 675 Query: 74 AVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVIN--GKVKGGFTVELNGIRAFL 131 +V+ G + S +A ++ ++ A E V G I+ K ++ IRA L Sbjct: 676 SVDTEQGRIVASIRQALGNKDPVSDISAVEIGNIVKGSISEIHKDNALIILQPTQIRALL 735 Query: 132 PGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSR---RAVIESENSAERDQLL-- 186 SL ++ R + EL K+ D+ VVV+R + V+ N+ ++ LL Sbjct: 736 --SLKNLANFR---QISLGELLVKLKVGDELDELVVVTRNPDKGVVIVANTPKKVPLLKG 790 Query: 187 -----ENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMA----WKRVKHPSEIVN 236 ++L+ G V G V T + A + + + G LH TD++ V P + + Sbjct: 791 SSVSIDSLKVGQIVGGRVTRHTRHSALIKVTPQIGGTLHPTDISDDYDMGLVLPPVDSI- 849 Query: 237 VGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTK----------------- 279 + +++ DR + ++ L + +K YPE TK Sbjct: 850 ----LRAAIIEIDRSKNQLRLSTRH---------SKMYPESTKKIVDQEIIHIFDIHVGD 896 Query: 280 -LTGRVTNLTDYGCFVEIEEGVEGLVHVSEM------DWTNKNIHPSKVVNVGDVVEVMV 332 + G + ++ D+G FV I ++ V + E+ DW + +V+ ++ Sbjct: 897 TVRGSIKSVADHGLFVTIGRDIDARVQIRELFDDFVEDWKAR-------FQEKQIVKGLI 949 Query: 333 LDIDEERRRISLGLKQ---CKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLD-GGID 388 L +D + R++ + LK N G +V+G +K I D+G+FI +D ++ Sbjct: 950 LSVDLQTRKVEMTLKSGDLSTRNGSSVGLADLKVGQKVDGLVKRIEDYGLFINIDRSKLN 1009 Query: 389 GLVHLSDISWNVAG--EEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFN 442 GL H S +S + A+ + +GD + AV++ +D R +SL E+ F Sbjct: 1010 GLCHKSQLSDSQGAGVSFALNSFHEGDRVKAVIIGIDKARISLSLKPSLFNEEDFQ 1065 Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 57/269 (21%), Positives = 115/269 (42%), Gaps = 25/269 (9%) Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEM--DWTNKNIHPSKVVNVGDVVEVMVLD 334 G + GRVT T + +++ + G +H +++ D+ + P V ++ +++ Sbjct: 801 GQIVGGRVTRHTRHSALIKVTPQIGGTLHPTDISDDYDMGLVLPP----VDSILRAAIIE 856 Query: 335 IDEERRRISLGLKQCKANPWQ----------QFAETHNKGDRVEGKIKSITDFGIFIGLD 384 ID + ++ L + K P + H GD V G IKS+ D G+F+ + Sbjct: 857 IDRSKNQLRLSTRHSKMYPESTKKIVDQEIIHIFDIH-VGDTVRGSIKSVADHGLFVTIG 915 Query: 385 GGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNW 444 ID V + ++ + + R +++ + ++L VD + ++ + +K N Sbjct: 916 RDIDARVQIRELFDDFVEDWKAR-FQEKQIVKGLILSVDLQTRKVEMTLKSGDLSTRNGS 974 Query: 445 ---VALNKKGAIVTGKVTAVDAKGATVEL-ADGVEGYLRASEASRDRVEDATLVLSV--- 497 +A K G V G V ++ G + + + G S+ S + + L+ Sbjct: 975 SVGLADLKVGQKVDGLVKRIEDYGLFINIDRSKLNGLCHKSQLSDSQGAGVSFALNSFHE 1034 Query: 498 GDEVEAKFTGVDRKNRAISLSVRAKDEAD 526 GD V+A G+D+ ++SL +E D Sbjct: 1035 GDRVKAVIIGIDKARISLSLKPSLFNEED 1063 >UniRef50_O31489 Uncharacterized protein ydcI n=35 Tax=cellular organisms RepID=YDCI_BACSU Length = 719 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 38/75 (50%), Positives = 58/75 (77%), Gaps = 1/75 (1%) Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 LE+L+EGME++G V+N+ D+GAFVD+G DGL+HI+ ++ + VKHP ++V+VGD +TV Sbjct: 643 LEDLKEGMELQGTVRNVVDFGAFVDIGVKQDGLVHISKLSNQFVKHPLDVVSVGDIVTVW 702 Query: 245 VLKFDRERTRVSLGL 259 V D ++ RVSL + Sbjct: 703 VDGVDVQKGRVSLSM 717 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 31/72 (43%), Positives = 49/72 (68%), Gaps = 3/72 (4%) Query: 276 EGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNI-HPSKVVNVGDVVEVMVLD 334 EG +L G V N+ D+G FV+I +GLVH+S++ +N+ + HP VV+VGD+V V V Sbjct: 648 EGMELQGTVRNVVDFGAFVDIGVKQDGLVHISKL--SNQFVKHPLDVVSVGDIVTVWVDG 705 Query: 335 IDEERRRISLGL 346 +D ++ R+SL + Sbjct: 706 VDVQKGRVSLSM 717 >UniRef50_D2MLP5 S1 RNA binding domain protein n=1 Tax=Bulleidia extructa W1219 RepID=D2MLP5_9FIRM Length = 749 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 39/78 (50%), Positives = 53/78 (67%), Gaps = 1/78 (1%) Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 LE+L G ++ G V+N+ D+GAF+D+G DGL HI+ MA K+ HPSEI++VGD +TV Sbjct: 631 LEDLHVGDQLSGTVRNVVDFGAFIDIGLHEDGLAHISHMAMKKFNHPSEILSVGDIVTVW 690 Query: 245 VLKFDRERTRVSLGLKQL 262 V + D R RV L L L Sbjct: 691 VYEIDINRNRVQLSLLPL 708 Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 1/70 (1%) Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDID 336 G +L+G V N+ D+G F++I +GL H+S M N HPS++++VGD+V V V +ID Sbjct: 637 GDQLSGTVRNVVDFGAFIDIGLHEDGLAHISHMAMKKFN-HPSEILSVGDIVTVWVYEID 695 Query: 337 EERRRISLGL 346 R R+ L L Sbjct: 696 INRNRVQLSL 705 >UniRef50_A3ZZ79 Ribosomal protein S1-like RNA-binding domain protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZZ79_9PLAN Length = 1043 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 45/110 (40%), Positives = 65/110 (59%), Gaps = 13/110 (11%) Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLGGVD-GLLHITDMAWKRVKHPSEIVNVGDEITVK 244 LE+L+ GME+ G V N+ D+GAFVD+G D G++HI+ +A + V P E+V+VGD ITV Sbjct: 868 LEDLRPGMELSGTVLNVVDFGAFVDIGLHDSGMVHISRLANRYVSDPHEVVSVGDVITVW 927 Query: 245 VLKFDRERTRVSLGLKQLGEDPWVAI------------AKRYPEGTKLTG 282 V++ D++R RVSL + G + + AKR P G G Sbjct: 928 VVEIDKDRRRVSLTAIEPGTEKAIPAADEKQRVDRPERAKRPPRGKNRPG 977 Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 31/69 (44%), Positives = 49/69 (71%), Gaps = 3/69 (4%) Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIH-PSKVVNVGDVVEVMVLDI 335 G +L+G V N+ D+G FV+I G+VH+S + N+ + P +VV+VGDV+ V V++I Sbjct: 874 GMELSGTVLNVVDFGAFVDIGLHDSGMVHISRL--ANRYVSDPHEVVSVGDVITVWVVEI 931 Query: 336 DEERRRISL 344 D++RRR+SL Sbjct: 932 DKDRRRVSL 940 >UniRef50_A6C5P8 Ribosomal protein S1-like RNA-binding domain n=2 Tax=Planctomyces RepID=A6C5P8_9PLAN Length = 828 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 43/89 (48%), Positives = 59/89 (66%), Gaps = 1/89 (1%) Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLGGVD-GLLHITDMAWKRVKHPSEIVNVGDEITVK 244 LE L EGME++G V N+ D+GAFVD+G D L+H+++MA +++P + V+VGD IT Sbjct: 659 LEQLTEGMELQGTVLNVVDFGAFVDVGLKDSALIHVSEMANHFIENPYQFVSVGDVITAW 718 Query: 245 VLKFDRERTRVSLGLKQLGEDPWVAIAKR 273 VL D ER RVSL L + G D A+R Sbjct: 719 VLGVDLERRRVSLTLIRPGTDRQPKKAQR 747 Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 34/72 (47%), Positives = 46/72 (63%), Gaps = 3/72 (4%) Query: 276 EGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNI-HPSKVVNVGDVVEVMVLD 334 EG +L G V N+ D+G FV++ L+HVSEM N I +P + V+VGDV+ VL Sbjct: 664 EGMELQGTVLNVVDFGAFVDVGLKDSALIHVSEM--ANHFIENPYQFVSVGDVITAWVLG 721 Query: 335 IDEERRRISLGL 346 +D ERRR+SL L Sbjct: 722 VDLERRRVSLTL 733 >UniRef50_A9NHV1 Tex protein-related transcription accessory protein (S1 RNA binding domain) n=14 Tax=Bacteria RepID=A9NHV1_ACHLI Length = 724 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 37/75 (49%), Positives = 58/75 (77%), Gaps = 1/75 (1%) Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 +E+L+ GME++G V+N+TD+GAFVD+G DGL+HI+ ++ K VKHP ++V+VG +TV Sbjct: 645 IEDLKVGMELEGTVRNVTDFGAFVDVGLKNDGLVHISKLSNKFVKHPKDVVSVGQIVTVW 704 Query: 245 VLKFDRERTRVSLGL 259 VL DR++ +V L + Sbjct: 705 VLNIDRDKGQVGLTM 719 Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 30/71 (42%), Positives = 49/71 (69%), Gaps = 3/71 (4%) Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNI-HPSKVVNVGDVVEVMVLDI 335 G +L G V N+TD+G FV++ +GLVH+S++ +NK + HP VV+VG +V V VL+I Sbjct: 651 GMELEGTVRNVTDFGAFVDVGLKNDGLVHISKL--SNKFVKHPKDVVSVGQIVTVWVLNI 708 Query: 336 DEERRRISLGL 346 D ++ ++ L + Sbjct: 709 DRDKGQVGLTM 719 >UniRef50_C4L139 RNA binding S1 domain protein n=2 Tax=Exiguobacterium RepID=C4L139_EXISA Length = 709 Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 37/75 (49%), Positives = 55/75 (73%), Gaps = 1/75 (1%) Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 LE+LQ GME +G V+N+ D+GAFVD+G DGL+HI+ ++ + VKHP ++V VGD +TV Sbjct: 629 LEDLQVGMEFQGTVRNVIDFGAFVDIGVKQDGLVHISKLSNRYVKHPLDVVAVGDIVTVW 688 Query: 245 VLKFDRERTRVSLGL 259 + + D R R+SL + Sbjct: 689 IEQVDVNRGRISLTM 703 Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 3/71 (4%) Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNI-HPSKVVNVGDVVEVMVLDI 335 G + G V N+ D+G FV+I +GLVH+S++ +N+ + HP VV VGD+V V + + Sbjct: 635 GMEFQGTVRNVIDFGAFVDIGVKQDGLVHISKL--SNRYVKHPLDVVAVGDIVTVWIEQV 692 Query: 336 DEERRRISLGL 346 D R RISL + Sbjct: 693 DVNRGRISLTM 703 >UniRef50_D1ZWZ1 Whole genome shotgun sequence assembly, contig_1889 n=1 Tax=Sordaria macrospora RepID=D1ZWZ1_SORMA Length = 150 Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 37/98 (37%), Positives = 60/98 (61%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEI 62 + FA + ++ E+ G +V G V I+ D+ ++D GLKSE +P +F + ++ Sbjct: 7 DDFASMLDDMFGASESFEGRVVIGTVTGIENDLAVIDVGLKSEGRVPLREFAAPGQKADL 66 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEK 100 +VGDEV+V +D VE+ GE +LSR++A+R AW LE Sbjct: 67 KVGDEVEVYVDRVENANGEAMLSRDRARREAAWDKLEP 104 >UniRef50_A5GJG3 30S ribosomal protein S1 n=1 Tax=Synechococcus sp. WH 7803 RepID=A5GJG3_SYNPW Length = 403 Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 70/265 (26%), Positives = 122/265 (46%), Gaps = 30/265 (11%) Query: 21 GSIVRGVVVAIDKDVVLVDAGLKSESAIPA------------EQFKNAQGELEIQVGDEV 68 G +V G V+ ++ D V VD G K+ +P E+F LEI EV Sbjct: 131 GDVVTGTVIGMESDGVYVDIGGKAPGFMPKSECGLGVITNLKERFPKG---LEI----EV 183 Query: 69 DVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIR 128 V + DG T+ R A R ++W +++ ++ + ++G +GG T +L G+R Sbjct: 184 LVTREQNADGM-VTISCRALALR-QSWDKVKQLEKEGKVAQVKVSGFNRGGVTCDLEGLR 241 Query: 129 AFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLEN 188 F+P S ++ + L GK L ++++ + +V+S + + AE Sbjct: 242 GFIPRS--QLQEGENHEALVGKTLGVAFLEVNPETRKLVLSEKKAATAARFAE------- 292 Query: 189 LQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKF 248 L+ G V+G V + YG F+DLGG+ GLLH + + ++ E+ + GD + + + Sbjct: 293 LEVGQLVEGHVAAVKPYGLFIDLGGISGLLHQSMITGGSLRSLREVFDQGDTVKALITEL 352 Query: 249 DRERTRVSLGLKQLGEDPWVAIAKR 273 D R R++L L P + R Sbjct: 353 DPGRGRIALNTAMLEGQPGELLINR 377 Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 67/249 (26%), Positives = 114/249 (45%), Gaps = 15/249 (6%) Query: 195 VKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERT 253 V G V + G +VD+GG G + ++ + + E G EI V V + Sbjct: 134 VTGTVIGMESDGVYVDIGGKAPGFMPKSECGLGVITNLKERFPKGLEIEVLVTREQNADG 193 Query: 254 RVSLGLKQLG-EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWT 312 V++ + L W + + EG +V+ G ++E G+ G + S++ Sbjct: 194 MVTISCRALALRQSWDKVKQLEKEGKVAQVKVSGFNRGGVTCDLE-GLRGFIPRSQLQEG 252 Query: 313 NKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIK 372 + VG + V L+++ E R++ L K KA +FAE G VEG + Sbjct: 253 ENH-----EALVGKTLGVAFLEVNPETRKLVLSEK--KAATAARFAELE-VGQLVEGHVA 304 Query: 373 SITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVRE-YKKGDEIAAVVLQVDAERERISL 431 ++ +G+FI L GGI GL+H S I+ ++RE + +GD + A++ ++D R RI+L Sbjct: 305 AVKPYGLFIDL-GGISGLLHQSMITGGSL--RSLREVFDQGDTVKALITELDPGRGRIAL 361 Query: 432 GVKQLAEDP 440 L P Sbjct: 362 NTAMLEGQP 370 >UniRef50_C1CRY7 S1 RNA binding domain protein n=174 Tax=Bacteria RepID=C1CRY7_STRZT Length = 709 Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 36/75 (48%), Positives = 57/75 (76%), Gaps = 1/75 (1%) Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 +++L G +++G+V+N+ D+GAFVD+G DGL+HI+ M+ K +KHPS++V VGD ++V Sbjct: 628 IKDLVVGQKLEGVVRNVVDFGAFVDIGIHEDGLIHISHMSRKFIKHPSQVVAVGDLVSVW 687 Query: 245 VLKFDRERTRVSLGL 259 V K D ER +V+L L Sbjct: 688 VKKIDTEREKVNLSL 702 Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 3/71 (4%) Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNI-HPSKVVNVGDVVEVMVLDI 335 G KL G V N+ D+G FV+I +GL+H+S M + K I HPS+VV VGD+V V V I Sbjct: 634 GQKLEGVVRNVVDFGAFVDIGIHEDGLIHISHM--SRKFIKHPSQVVAVGDLVSVWVKKI 691 Query: 336 DEERRRISLGL 346 D ER +++L L Sbjct: 692 DTEREKVNLSL 702 Score = 42.7 bits (99), Expect = 0.040, Method: Compositional matrix adjust. Identities = 21/70 (30%), Positives = 42/70 (60%), Gaps = 1/70 (1%) Query: 364 GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVD 423 G ++EG ++++ DFG F+ + DGL+H+S +S + + GD ++ V ++D Sbjct: 634 GQKLEGVVRNVVDFGAFVDIGIHEDGLIHISHMSRKFIKHPS-QVVAVGDLVSVWVKKID 692 Query: 424 AERERISLGV 433 ERE+++L + Sbjct: 693 TEREKVNLSL 702 >UniRef50_D0LLY3 Tex-like protein protein-like protein n=9 Tax=Bacteria RepID=D0LLY3_HALO1 Length = 801 Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 37/79 (46%), Positives = 57/79 (72%), Gaps = 1/79 (1%) Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 LE+L+ M+++G+V N+TD+GAFVD+G DGL+HI+ ++ + VK P E+V VGD+I V+ Sbjct: 648 LEDLKPEMQLEGVVTNVTDFGAFVDVGVHQDGLVHISQLSDRFVKDPREVVKVGDKIKVR 707 Query: 245 VLKFDRERTRVSLGLKQLG 263 VL D R R++L + G Sbjct: 708 VLDVDLARKRIALSARSDG 726 Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 34/74 (45%), Positives = 51/74 (68%), Gaps = 4/74 (5%) Query: 275 PEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEM-DWTNKNIHPSKVVNVGDVVEVMVL 333 PE +L G VTN+TD+G FV++ +GLVH+S++ D K+ P +VV VGD ++V VL Sbjct: 653 PE-MQLEGVVTNVTDFGAFVDVGVHQDGLVHISQLSDRFVKD--PREVVKVGDKIKVRVL 709 Query: 334 DIDEERRRISLGLK 347 D+D R+RI+L + Sbjct: 710 DVDLARKRIALSAR 723 Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust. Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 14/101 (13%) Query: 346 LKQCKANPWQQFAETHNKGD-----------RVEGKIKSITDFGIFIGLDGGIDGLVHLS 394 LK+ +P +F + D ++EG + ++TDFG F+ + DGLVH+S Sbjct: 625 LKKPGRDPRDEFEPPRFRDDVNTLEDLKPEMQLEGVVTNVTDFGAFVDVGVHQDGLVHIS 684 Query: 395 DISWNVAGEEAVRE-YKKGDEIAAVVLQVDAERERISLGVK 434 +S + RE K GD+I VL VD R+RI+L + Sbjct: 685 QLSDRFVKDP--REVVKVGDKIKVRVLDVDLARKRIALSAR 723 >UniRef50_C8NGU9 Histidine triad domain-containing protein n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NGU9_9LACT Length = 751 Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 37/75 (49%), Positives = 55/75 (73%), Gaps = 1/75 (1%) Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 +E+LQ GME++G V+N+ D+GAFVD+G DGL+HI+ + VKHPS++V VGD +TV Sbjct: 669 MEDLQVGMELEGTVRNVVDFGAFVDIGVKQDGLVHISKLKKGFVKHPSDVVAVGDIVTVW 728 Query: 245 VLKFDRERTRVSLGL 259 V + D ++ RV L + Sbjct: 729 VTELDLKKGRVGLSM 743 Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 1/70 (1%) Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDID 336 G +L G V N+ D+G FV+I +GLVH+S++ HPS VV VGD+V V V ++D Sbjct: 675 GMELEGTVRNVVDFGAFVDIGVKQDGLVHISKLKKGFVK-HPSDVVAVGDIVTVWVTELD 733 Query: 337 EERRRISLGL 346 ++ R+ L + Sbjct: 734 LKKGRVGLSM 743 >UniRef50_A6NVV1 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NVV1_9BACE Length = 313 Score = 75.1 bits (183), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 61/223 (27%), Positives = 96/223 (43%), Gaps = 20/223 (8%) Query: 149 GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAF 208 GK + F V ++Q+ ++ R S + + L++ L+ G + V +L +GAF Sbjct: 88 GKPVAFTVEAVEQEEG--LLRPRLSRRSAQTMALEHLMDTLEPGTVLPATVSHLEPFGAF 145 Query: 209 VDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPW 267 VD+G GV ++ I ++ R+ HP VG EI ++ E RV L ++L W Sbjct: 146 VDIGCGVPSMISIERISVSRIPHPDRRFTVGQEIYAVAMETCPELGRVILSHRELLGT-W 204 Query: 268 VAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDV 327 A R+ G + G V + DYG FVE+ + GL P ++ GD Sbjct: 205 QENAARFSAGMTVPGYVRGIKDYGIFVELSPNLSGLA------------EPRGDLHEGDR 252 Query: 328 VEVMVLDIDEERRRISL----GLKQCKANPWQQFAETHNKGDR 366 V V + I +R +I L L P F + DR Sbjct: 253 VSVYIKAIFPDRMKIKLLVIEKLPPEGPQPLTYFLPPSGRLDR 295 Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 39/157 (24%), Positives = 72/157 (45%), Gaps = 14/157 (8%) Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDID 336 GT L V++L +G FV+I GV ++ + + ++ HP + VG + + ++ Sbjct: 129 GTVLPATVSHLEPFGAFVDIGCGVPSMISIERIS-VSRIPHPDRRFTVGQEIYAVAMETC 187 Query: 337 EERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDI 396 E R+ L ++ WQ+ A + G V G ++ I D+GIF+ L + GL Sbjct: 188 PELGRVILSHRELLGT-WQENAARFSAGMTVPGYVRGIKDYGIFVELSPNLSGLA----- 241 Query: 397 SWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGV 433 E + +GD ++ + + +R +I L V Sbjct: 242 -------EPRGDLHEGDRVSVYIKAIFPDRMKIKLLV 271 >UniRef50_B1VKK5 Putative uncharacterized protein n=1 Tax=Streptomyces griseus subsp. griseus NBRC 13350 RepID=B1VKK5_STRGG Length = 176 Score = 74.7 bits (182), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 53/162 (32%), Positives = 81/162 (50%), Gaps = 9/162 (5%) Query: 187 ENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVL 246 + +EG KG+V ++ D+G FVDLGG G ++ +++ W R +E++ G E+ V+ Sbjct: 20 QKFREGDVCKGVVSDVFDFGVFVDLGGCVGFVNPSEITWIRYTEITEVICEGREVNFLVI 79 Query: 247 KFDRERTRVSLGLKQLGEDPWVAIAK-RYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVH 305 R +V L +K L EDP A+ R+ G TG V +T G V + G+ GL+ Sbjct: 80 GHALAREQVLLSIKGLEEDPIKKFARERF--GASFTGSVEMVTPVGLHVSLPGGMGGLLP 137 Query: 306 VSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLK 347 S M T VGD + V V I+ R+I L L+ Sbjct: 138 ESAMAGTADR------YRVGDEISVEVARINLHDRQIELSLR 173 Score = 68.2 bits (165), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 55/170 (32%), Positives = 82/170 (48%), Gaps = 16/170 (9%) Query: 355 QQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDE 414 Q+F E GD +G + + DFG+F+ L GG G V+ S+I+W + E +G E Sbjct: 20 QKFRE----GDVCKGVVSDVFDFGVFVDL-GGCVGFVNPSEITW-IRYTEITEVICEGRE 73 Query: 415 IAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGV 474 + +V+ RE++ L +K L EDP + A + GA TG V V G V L G+ Sbjct: 74 VNFLVIGHALAREQVLLSIKGLEEDPIKKF-ARERFGASFTGSVEMVTPVGLHVSLPGGM 132 Query: 475 EGYL--RASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAK 522 G L A + DR VGDE+ + ++ +R I LS+R Sbjct: 133 GGLLPESAMAGTADRYR-------VGDEISVEVARINLHDRQIELSLRTP 175 >UniRef50_Q9LHM6 Pre-rRNA processing protein RRP5 n=6 Tax=rosids RepID=Q9LHM6_ARATH Length = 1765 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 53/159 (33%), Positives = 86/159 (54%), Gaps = 9/159 (5%) Query: 282 GRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRR 341 G V N GCF+ + VE V +S + T P K VG +V VL+++ +R Sbjct: 1219 GYVKNTMSKGCFIILSRTVEAKVRLSNLCDTFVK-EPEKEFPVGKLVTGRVLNVEPLSKR 1277 Query: 342 ISLGLKQCKANPWQQFAETH-----NKGDRVEGKIKSITDFGIFIGLD-GGIDGLVHLSD 395 I + LK A + +E++ + GD + G+I+ + FG+FI +D G+ GL H+S Sbjct: 1278 IEVTLKTVNAGGRPK-SESYDLKKLHVGDMISGRIRRVEPFGLFIDIDQTGMVGLCHISQ 1336 Query: 396 ISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVK 434 +S + E YK G+ + A +L++D E++RISLG+K Sbjct: 1337 LSDDRM-ENVQARYKAGESVRAKILKLDEEKKRISLGMK 1374 Score = 71.2 bits (173), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 53/179 (29%), Positives = 96/179 (53%), Gaps = 9/179 (5%) Query: 176 SENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEI 234 ++N +R + +E+L M V+G VKN G F+ L V+ + ++++ VK P + Sbjct: 1198 NDNVCKRFERIEDLSPDMGVQGYVKNTMSKGCFIILSRTVEAKVRLSNLCDTFVKEPEKE 1257 Query: 235 VNVGDEITVKVLKFDRERTRVSLGLKQL--GEDPWVAIA--KRYPEGTKLTGRVTNLTDY 290 VG +T +VL + R+ + LK + G P K+ G ++GR+ + + Sbjct: 1258 FPVGKLVTGRVLNVEPLSKRIEVTLKTVNAGGRPKSESYDLKKLHVGDMISGRIRRVEPF 1317 Query: 291 GCFVEIEE-GVEGLVHVSEM-DWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLK 347 G F++I++ G+ GL H+S++ D +N+ G+ V +L +DEE++RISLG+K Sbjct: 1318 GLFIDIDQTGMVGLCHISQLSDDRMENVQAR--YKAGESVRAKILKLDEEKKRISLGMK 1374 Score = 65.5 bits (158), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 85/350 (24%), Positives = 152/350 (43%), Gaps = 20/350 (5%) Query: 188 NLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVL 246 +++ GM K V ++ +GA V GG+ + + M+ V P + VG E+ +VL Sbjct: 356 DVKPGMVTKAKVISVDTFGAIVQFSGGLKAMCPLRHMSEFEVTKPRKKFKVGAELVFRVL 415 Query: 247 KFDRERTRVSLGLKQLGED--PWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLV 304 +R V+ K L + P ++ EG G +T + +GCFV GV+G V Sbjct: 416 GCKSKRITVTYK-KTLVKSKLPILSSYTDATEGLVTHGWITKIEKHGCFVRFYNGVQGFV 474 Query: 305 HVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKG 364 E+ + P V +VG+VV+ V +RI+L ++ + ++ G Sbjct: 475 PRFELGLEPGS-DPDSVFHVGEVVKCRVTSAVHGTQRITLSFMIKPSSVSED--DSIKLG 531 Query: 365 DRVEGKIKSITDFGIFIGLDG-----GIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVV 419 V G I +IT + + + G HL+D + + + + G E+ + Sbjct: 532 SIVSGIIDTITSQAVIVRVKSKSVVKGTISAEHLAD--HHEQAKLIMSLLRPGYELDK-L 588 Query: 420 LQVDAERERISLGVK----QLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVE 475 L +D E ++L K +LAE+ +++ L + ++V G V + G V + Sbjct: 589 LVLDIEGNNMALSSKYSLIKLAEELPSDFNQL-QPNSVVHGYVCNLIENGCFVRFLGRLT 647 Query: 476 GYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEA 525 G+ S+A D D + VG V A V+++ I+LS++ A Sbjct: 648 GFAPRSKAIDDPKADVSESFFVGQSVRANIVDVNQEKSRITLSLKQSSCA 697 Score = 48.9 bits (115), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 79/160 (49%), Gaps = 6/160 (3%) Query: 367 VEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAER 426 V+G +K+ G FI L ++ V LS++ + +E +E+ G + VL V+ Sbjct: 1217 VQGYVKNTMSKGCFIILSRTVEAKVRLSNLC-DTFVKEPEKEFPVGKLVTGRVLNVEPLS 1275 Query: 427 ERISLGVKQLAE--DPFNNWVALNKK--GAIVTGKVTAVDAKGATVEL-ADGVEGYLRAS 481 +RI + +K + P + L K G +++G++ V+ G +++ G+ G S Sbjct: 1276 KRIEVTLKTVNAGGRPKSESYDLKKLHVGDMISGRIRRVEPFGLFIDIDQTGMVGLCHIS 1335 Query: 482 EASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRA 521 + S DR+E+ G+ V AK +D + + ISL +++ Sbjct: 1336 QLSDDRMENVQARYKAGESVRAKILKLDEEKKRISLGMKS 1375 Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust. Identities = 48/203 (23%), Positives = 89/203 (43%), Gaps = 18/203 (8%) Query: 344 LGLKQ--------CKANPWQQFAETHN---KGDRVEGKIKSITDFGIFIGLDGGIDGLVH 392 LGLKQ K + ++ TH+ G + K+ S+ FG + GG+ + Sbjct: 329 LGLKQMEGLAVGTLKESAFEGPVFTHSDVKPGMVTKAKVISVDTFGAIVQFSGGLKAMCP 388 Query: 393 LSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQL---AEDPFNNWVALNK 449 L +S + +++K G E+ VL + +RI++ K+ ++ P + Sbjct: 389 LRHMS-EFEVTKPRKKFKVGAELVFRVL--GCKSKRITVTYKKTLVKSKLPILSSYTDAT 445 Query: 450 KGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVD 509 +G + G +T ++ G V +GV+G++ E + D V VG+ V+ + T Sbjct: 446 EGLVTHGWITKIEKHGCFVRFYNGVQGFVPRFELGLEPGSDPDSVFHVGEVVKCRVTSAV 505 Query: 510 RKNRAISLSVRAKDEA-DEKDAI 531 + I+LS K + E D+I Sbjct: 506 HGTQRITLSFMIKPSSVSEDDSI 528 >UniRef50_D0NSW6 rRNA biogenesis protein rrp5 n=1 Tax=Phytophthora infestans T30-4 RepID=D0NSW6_PHYIN Length = 1882 Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 75/276 (27%), Positives = 115/276 (41%), Gaps = 17/276 (6%) Query: 216 GLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYP 275 G +HI++++ KRV + VG I +VL F S+ + V K Sbjct: 387 GYVHISNVSDKRVDKLEKKFTVGSSIKCRVLGFSPFDAVASVSCTEHSISQTVLRHKDLK 446 Query: 276 EGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMD--WTNKNIHPSKVVNVGDVVEVMVL 333 GTK+ G++ ++ +G +EI EGV GLV M NK + K G VL Sbjct: 447 PGTKVNGKILSVESWGILMEISEGVRGLVTSQHMPAFLLNKKANSGK-YKAGKTTSARVL 505 Query: 334 DIDEERRRISL----GLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDG 389 +D + + L GL F E G G I I ++G+ + + G Sbjct: 506 HVDLDANKTYLTMKSGLLSSDLPVLSSFKEA-TMGLIAHGFITKIGEYGVIVTFYNNVYG 564 Query: 390 LVHLSDISWNVAGEEAVRE-YKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALN 448 LV ++ + AG E + E Y G + A V + DA R+R+ L + N A Sbjct: 565 LVPMAVLQQ--AGIENLEEAYVPGQVVKARVTRCDANRKRLMLSFDTTSNSSGNKPTAAP 622 Query: 449 KKGAIVTG------KVTAVDAKGATVELADGVEGYL 478 + + + G K+T VD V+ DG+EG L Sbjct: 623 EIASKLVGTKITNVKITDVDTTCFRVQTKDGMEGVL 658 >UniRef50_C5XCN3 Putative uncharacterized protein Sb02g006000 n=1 Tax=Sorghum bicolor RepID=C5XCN3_SORBI Length = 1862 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 72/261 (27%), Positives = 122/261 (46%), Gaps = 39/261 (14%) Query: 206 GAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRER---TRVSLGLKQ 261 G V +G + G +H T++ V P + G + KVL R RV L L+ Sbjct: 1221 GLVVQIGPHLRGRVHYTEIVDSWVTEPLSGFHEGQFVKCKVLSVSRSSEGSLRVDLSLRS 1280 Query: 262 -----------LGEDPWVAIA-----KRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVH 305 L +D + K GT++ G V N+ GCF+ I VE + Sbjct: 1281 SNLIRDSNNSGLVDDLATCTSRIEKIKDLLPGTEIKGYVKNVNSKGCFIMISRMVEARIT 1340 Query: 306 VSEM-DWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQ-----FAE 359 +S + D +N P K VG +V VL D R+ L++ + ++ +++ Sbjct: 1341 LSNLSDEYVEN--PQKDFPVGMLVHGRVLSTDPSSGRVEASLRKTTGSKLEKLDDISYSD 1398 Query: 360 THNKGDRVEGKIKSITDFGIFIGLDGG-IDGLVHLSDISWNVAGEEAVRE----YKKGDE 414 H GD ++G++K + FG+F+ + + GL H+S++S +E V + YK GD Sbjct: 1399 LH-VGDIIDGQVKRVESFGLFVTIRRSELVGLCHVSELS-----DEPVVDINSCYKAGDM 1452 Query: 415 IAAVVLQVDAERERISLGVKQ 435 + A +L++D +R R+SLG+K+ Sbjct: 1453 VKAKILKIDEKRHRVSLGMKK 1473 Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 74/351 (21%), Positives = 141/351 (40%), Gaps = 53/351 (15%) Query: 187 ENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMA-WKRVKHPSEIVNVGDEITVK 244 ++++ GM V+ V + +GA V GV L + M+ + V P + VG E+ + Sbjct: 474 DDVKPGMLVRAKVATVEPFGAIVQFSSGVKALCPLPHMSELEHVVKPPKKFKVGAELLFR 533 Query: 245 VLKFDRERTRVSLGLKQLGEDPWVAIAKRYPE---GTKLTGRVTNLTDYGCFVEIEEGVE 301 VL +R V+ K L + +A Y + G G +T + +GCFV+ GV+ Sbjct: 534 VLGCKSKRVTVTYK-KSLVKSKLDVLAS-YADAKIGLVTHGWITKIEKHGCFVKFYNGVQ 591 Query: 302 GLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETH 361 G V S++ V +VG VV+ ++++ R++++ F +H Sbjct: 592 GFVSRSDLGL-EAGTEAENVYHVGQVVKCRIINVIPASRKLNVS-----------FVISH 639 Query: 362 NK---------GDRVEGKIKSITDFGIFIGLDGGIDGLV---HLSDISWNVAGEEAVREY 409 N+ G V G ++ +T + + ++G G + HL+D ++ G V Sbjct: 640 NRVIPIDTPKLGSIVSGVVERLTPAAVVVSVNGFSKGTILNEHLAD-HHDIEGHNLV--- 695 Query: 410 KKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVE 469 + A+ I+ +E ++ G +V G + + G V Sbjct: 696 ------------LSAKHSLINCANDIPSE------ISQMHPGVVVHGYICNIIESGCFVR 737 Query: 470 LADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 + G+ +A R+E + VG V + V + + LS++ Sbjct: 738 FLGHLTGFSPKDKAVDRRIERLSDAFYVGQSVRSHILSVTAETARVKLSLQ 788 Score = 45.1 bits (105), Expect = 0.007, Method: Compositional matrix adjust. Identities = 49/233 (21%), Positives = 100/233 (42%), Gaps = 9/233 (3%) Query: 291 GCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCK 350 G F+EI +S D ++K+ + G + V +L + R + + K Sbjct: 406 GLFLEIPSPTPSPGFISIHDVSDKDAKNLEKFKEGSSLRVRILGV---RNLEGVAIGTVK 462 Query: 351 ANPWQQFAETHN---KGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVR 407 + ++ TH+ G V K+ ++ FG + G+ L L +S + + Sbjct: 463 DSAFEGSVFTHDDVKPGMLVRAKVATVEPFGAIVQFSSGVKALCPLPHMSELEHVVKPPK 522 Query: 408 EYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALN--KKGAIVTGKVTAVDAKG 465 ++K G E+ VL ++R ++ K L + + + K G + G +T ++ G Sbjct: 523 KFKVGAELLFRVLGCKSKRVTVTYK-KSLVKSKLDVLASYADAKIGLVTHGWITKIEKHG 581 Query: 466 ATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLS 518 V+ +GV+G++ S+ + +A V VG V+ + V +R +++S Sbjct: 582 CFVKFYNGVQGFVSRSDLGLEAGTEAENVYHVGQVVKCRIINVIPASRKLNVS 634 Score = 45.1 bits (105), Expect = 0.007, Method: Compositional matrix adjust. Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 2/109 (1%) Query: 155 KVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL--G 212 +V+ D V S R S+ D +L G + G VK + +G FV + Sbjct: 1365 RVLSTDPSSGRVEASLRKTTGSKLEKLDDISYSDLHVGDIIDGQVKRVESFGLFVTIRRS 1424 Query: 213 GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQ 261 + GL H+++++ + V + GD + K+LK D +R RVSLG+K+ Sbjct: 1425 ELVGLCHVSELSDEPVVDINSCYKAGDMVKAKILKIDEKRHRVSLGMKK 1473 Score = 43.5 bits (101), Expect = 0.022, Method: Compositional matrix adjust. Identities = 43/181 (23%), Positives = 76/181 (41%), Gaps = 8/181 (4%) Query: 364 GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVD 423 G ++G +K++ G FI + ++ + LS++S E +++ G + VL D Sbjct: 1312 GTEIKGYVKNVNSKGCFIMISRMVEARITLSNLSDEYV-ENPQKDFPVGMLVHGRVLSTD 1370 Query: 424 AERERISLGVKQLAEDPFNNWVALNKK----GAIVTGKVTAVDAKGATVELADG-VEGYL 478 R+ +++ ++ G I+ G+V V++ G V + + G Sbjct: 1371 PSSGRVEASLRKTTGSKLEKLDDISYSDLHVGDIIDGQVKRVESFGLFVTIRRSELVGLC 1430 Query: 479 RASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQE 538 SE S + V D GD V+AK +D K +SL + K + D A N E Sbjct: 1431 HVSELSDEPVVDINSCYKAGDMVKAKILKIDEKRHRVSLGM--KKSYFDSDLTADTNDDE 1488 Query: 539 D 539 D Sbjct: 1489 D 1489 >UniRef50_O74835 rRNA biogenesis protein rrp5 n=1 Tax=Schizosaccharomyces pombe RepID=RRP5_SCHPO Length = 1690 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 75/266 (28%), Positives = 121/266 (45%), Gaps = 18/266 (6%) Query: 184 QLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 Q ENL G + G V N+ + GA + L G + G + DM P + + Sbjct: 1045 QGFENLTPGSRLVGKVTNVNEAGAILQLPGHMSGRVSRIDMFDDYDILPETKFTRNNLVG 1104 Query: 243 VKVLKFDRERTRVSLGLKQLG--------EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFV 294 V VL D +V+L + +D + G G V N+ + G FV Sbjct: 1105 VCVLSVDVPNRKVALSARNSRTQSQPVEIKDKEINSVDDLKIGDICRGFVCNVANQGLFV 1164 Query: 295 EIEEGVEGLVHVSEM-DWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP 353 I + V + E+ D K+ P +V +V+ ++ ID + +RI + LKQ K Sbjct: 1165 TIGHNLIARVKIGELFDTFIKDWKPH--FHVNQLVKGSIVGIDNDSKRIEMSLKQSKIKD 1222 Query: 354 WQQFAETHNK---GDRVEGKIKSITDFGIFIGLDG--GIDGLVHLSDISWNVAGEEAVRE 408 + +T G ++G + + D+G+ I +DG I GL H S+I+ V + + Sbjct: 1223 SSEITKTFADIAVGSNLDGTVVKVGDYGVLIRIDGTDNIVGLCHKSEIADAVVLNIS-KL 1281 Query: 409 YKKGDEIAAVVLQVDAERERISLGVK 434 Y GD++ A VL VD+E+ RI+LG+K Sbjct: 1282 YSSGDKVRAHVLDVDSEKRRIALGLK 1307 Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 114/444 (25%), Positives = 183/444 (41%), Gaps = 65/444 (14%) Query: 99 EKAYEDAETVTGVINGKVKGGFTVEL-NGIRAFLPGSLVDVRPVRDTL-HLE-GKELEFK 155 E+A +TV G + + G VE N +RAFLP S + +RD H + G+ L Sbjct: 574 EQATPGTQTV-GTLARIFEDGAIVEFYNSVRAFLPVSEMSEAYIRDAREHFKVGQTLSVT 632 Query: 156 VIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GV 214 ++ D + + V R E A+R + EN++ G + GIV T+ VDLG V Sbjct: 633 IVSCDPENRKMRVGCR---EQSWDAKRLERFENIKAGSVLSGIVLQKTEDSVIVDLGDKV 689 Query: 215 DGLLHITDMAWKRVKHPSEIVNVGDEIT----VKVLKFDRERTRVSLGLKQLGEDPWVAI 270 G++ + + + S+++N T V VL+ D + +SL LK+ V Sbjct: 690 TGVITLGQLCDGDLNKCSKVMNKLRASTKLAEVLVLRKDTSKKLISLSLKK----SLVEA 745 Query: 271 AK--RYP-------EGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKV 321 AK R P EG K G V N T +G FVE +G+ LV + + + PS V Sbjct: 746 AKENRMPINITDLKEGIKYFGFVRNATTFGVFVEFCDGLVALVPKAYISEEYVPV-PSAV 804 Query: 322 VNVGDVVEVMVLDIDEERRRISLGLKQC--KANPWQQFAET-HNKGDRVEGKIKSITDF- 377 V + L ++ + + + K K +F E+ ++ + V+ IK D+ Sbjct: 805 YKPQQSVTCVCLSVELSQEKAFMSFKPLAQKQEKAVEFMESKYDIDNPVDETIKKTYDYV 864 Query: 378 ---------------GIFIGLDGGIDGLVHLSDISWN----VAGEEAVREYKKGDEIAAV 418 + + L + G V +S++ N V + ++ + KGD+I Sbjct: 865 AGKITWAVVTSAKASQLNVDLAANVHGRVDVSEVFDNFGEIVDPNKPLKRFHKGDKIRVR 924 Query: 419 VLQVDAERERISLGV------KQLAE----------DPFNNWVALNKKGAIVTGKVTAVD 462 VL + R L + KQ E +PF+ KKG VTG V V Sbjct: 925 VLGIHDSRNHKFLPISHRVSPKQFLELSVRPSILNMEPFSMKEPQFKKGDEVTGFVNNVS 984 Query: 463 AKGATVELADGVEGYLRASEASRD 486 + V L V G + + + D Sbjct: 985 KECVWVSLTPSVNGRIPILDLTTD 1008 Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 60/204 (29%), Positives = 95/204 (46%), Gaps = 31/204 (15%) Query: 167 VVSRRAVIESENSAERDQLLE----------NLQEGMEVKGIVKNLTDYGAFVDLGG--- 213 V +R+ + + NS + Q +E +L+ G +G V N+ + G FV +G Sbjct: 1112 VPNRKVALSARNSRTQSQPVEIKDKEINSVDDLKIGDICRGFVCNVANQGLFVTIGHNLI 1171 Query: 214 ----VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVA 269 + L WK H +++V ++ D + R+ + LKQ Sbjct: 1172 ARVKIGELFDTFIKDWKPHFHVNQLVKGS------IVGIDNDSKRIEMSLKQSKIKDSSE 1225 Query: 270 IAKRYPE---GTKLTGRVTNLTDYGCFVEIE--EGVEGLVHVSEM-DWTNKNIHPSKVVN 323 I K + + G+ L G V + DYG + I+ + + GL H SE+ D NI SK+ + Sbjct: 1226 ITKTFADIAVGSNLDGTVVKVGDYGVLIRIDGTDNIVGLCHKSEIADAVVLNI--SKLYS 1283 Query: 324 VGDVVEVMVLDIDEERRRISLGLK 347 GD V VLD+D E+RRI+LGLK Sbjct: 1284 SGDKVRAHVLDVDSEKRRIALGLK 1307 Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 101/442 (22%), Positives = 182/442 (41%), Gaps = 74/442 (16%) Query: 133 GSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVS-RRAVIESENSAERDQLLENLQE 191 G L V + L K E V++ D + + +S +++++E+ + +L+E Sbjct: 701 GDLNKCSKVMNKLRASTKLAEVLVLRKDTSKKLISLSLKKSLVEAAKENRMPINITDLKE 760 Query: 192 GMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAW---KRVKHPSEIVNVGDEITVKVLKF 248 G++ G V+N T +G FV+ DGL+ + A+ + V PS + +T L Sbjct: 761 GIKYFGFVRNATTFGVFVEF--CDGLVALVPKAYISEEYVPVPSAVYKPQQSVTCVCLSV 818 Query: 249 DRERTRVSLGLKQLGE-------------------DPWVAIAKRYPEGTKLTGRVTNLTD 289 + + + + K L + D + Y G VT+ Sbjct: 819 ELSQEKAFMSFKPLAQKQEKAVEFMESKYDIDNPVDETIKKTYDYVAGKITWAVVTSAKA 878 Query: 290 YGCFVEIEEGVEGLVHVSE-MDWTNKNIHPSKVV---NVGDVVEVMVLDIDEER------ 339 V++ V G V VSE D + + P+K + + GD + V VL I + R Sbjct: 879 SQLNVDLAANVHGRVDVSEVFDNFGEIVDPNKPLKRFHKGDKIRVRVLGIHDSRNHKFLP 938 Query: 340 --RRIS------LGLKQCKAN--PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDG 389 R+S L ++ N P+ KGD V G + +++ +++ L ++G Sbjct: 939 ISHRVSPKQFLELSVRPSILNMEPFSMKEPQFKKGDEVTGFVNNVSKECVWVSLTPSVNG 998 Query: 390 LVHLSDISWNVAGEEAV-REYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALN 448 + + D++ +V ++ + + G I V V+AE + I+L A P + L Sbjct: 999 RIPILDLTTDVKELNSLQKHFFLGKAIKCYV--VNAE-DSITLS----AIGPLQGFENLT 1051 Query: 449 KKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFT-- 506 G+ + GKVT V+ GA ++L G++ + D +D ++ E KFT Sbjct: 1052 -PGSRLVGKVTNVNEAGAILQLP----GHMSGRVSRIDMFDDYDIL------PETKFTRN 1100 Query: 507 --------GVDRKNRAISLSVR 520 VD NR ++LS R Sbjct: 1101 NLVGVCVLSVDVPNRKVALSAR 1122 Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 67/300 (22%), Positives = 122/300 (40%), Gaps = 41/300 (13%) Query: 203 TDYGAFVDLG--GVDGLLHITDMAWKRV--------------KHPSEIVNVGDEITVKVL 246 + G F D+G + G HI+ ++ K+V H + I+N + +L Sbjct: 411 SSLGVFCDVGVPEISGFAHISRLSDKKVAGISPNSGPYKVDSTHEARIINYSYVDNLYIL 470 Query: 247 KFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHV 306 F +++ ++ ++ ED V G + G + L G V I EG+ GLV Sbjct: 471 SF--QQSVLNQQFLRI-EDIEV--------GQFVDGTIAKLIPQGIVVTISEGINGLVPS 519 Query: 307 SEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN---PWQQFAETHNK 363 + M P + VG V+ VL + R+R+ L LK+ N P E Sbjct: 520 THMADIALQF-PERRFKVGSSVKCRVLSTNVLRKRVLLTLKKSLLNTDLPLIYDYEQATP 578 Query: 364 GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVD 423 G + G + I + G + + + +S++S +A +K G ++ ++ D Sbjct: 579 GTQTVGTLARIFEDGAIVEFYNSVRAFLPVSEMS-EAYIRDAREHFKVGQTLSVTIVSCD 637 Query: 424 AERERISLGVKQLAEDP-----FNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYL 478 E ++ +G ++ + D F N K G++++G V V+L D V G + Sbjct: 638 PENRKMRVGCREQSWDAKRLERFENI----KAGSVLSGIVLQKTEDSVIVDLGDKVTGVI 693 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q48082 30S ribosomal protein S1 n=129 Tax=Proteobacteri... 601 e-170 UniRef50_B8FI70 Ribosomal protein S1 n=14 Tax=Proteobacteria Rep... 576 e-163 UniRef50_Q89AJ3 30S ribosomal protein S1 n=296 Tax=Proteobacteri... 574 e-162 UniRef50_C4XQS6 30S ribosomal protein S1 n=3 Tax=Desulfovibrio R... 568 e-160 UniRef50_D0LJ72 Ribosomal protein S1 n=1 Tax=Haliangium ochraceu... 564 e-159 UniRef50_Q1IHI9 SSU ribosomal protein S1P n=6 Tax=Bacteria RepID... 563 e-159 UniRef50_Q1MQB8 Ribosomal protein S1 n=2 Tax=Desulfovibrionaceae... 562 e-158 UniRef50_C1FAB9 Ribosomal protein S1 n=2 Tax=Bacteria RepID=C1FA... 559 e-158 UniRef50_A8ZTA2 Ribosomal protein S1 n=22 Tax=Deltaproteobacteri... 556 e-157 UniRef50_Q6NDP1 30S ribosomal protein S1 n=165 Tax=Proteobacteri... 551 e-155 UniRef50_B6AR90 Ribosomal protein S1 n=1 Tax=Leptospirillum sp. ... 547 e-154 UniRef50_D1N749 Ribosomal protein S1 n=1 Tax=Victivallis vadensi... 540 e-152 UniRef50_B3QSU3 Ribosomal protein S1 n=1 Tax=Chloroherpeton thal... 531 e-149 UniRef50_C9RMY1 Ribosomal protein S1 n=1 Tax=Fibrobacter succino... 530 e-149 UniRef50_B3E440 Ribosomal protein S1 n=3 Tax=Deltaproteobacteria... 529 e-148 UniRef50_D2R4L6 Ribosomal protein S1 n=7 Tax=Planctomycetales Re... 525 e-147 UniRef50_Q2S1M7 Ribosomal protein S1, putative n=2 Tax=Rhodother... 520 e-146 UniRef50_C1A406 30S ribosomal protein S1 n=1 Tax=Gemmatimonas au... 519 e-145 UniRef50_A4SGB6 SSU ribosomal protein S1P n=12 Tax=Chlorobiaceae... 507 e-142 UniRef50_Q9Z8M3 30S ribosomal protein S1 n=18 Tax=Chlamydiae/Ver... 507 e-142 UniRef50_B0VI92 30S ribosomal subunit protein S1 (Modular protei... 507 e-142 UniRef50_Q1RJH1 30S ribosomal protein S1 n=16 Tax=Alphaproteobac... 506 e-141 UniRef50_B2UME1 Ribosomal protein S1 n=6 Tax=Chlamydiae/Verrucom... 500 e-140 UniRef50_C6XS49 RNA binding S1 domain protein n=62 Tax=Bacteroid... 479 e-133 UniRef50_B2S2M7 Ribosomal protein S1 n=5 Tax=Bacteria RepID=B2S2... 474 e-132 UniRef50_B5YH71 30S ribosomal protein S1 n=1 Tax=Thermodesulfovi... 473 e-132 UniRef50_Q0EYT6 Ribosomal protein S1 n=1 Tax=Mariprofundus ferro... 472 e-131 UniRef50_B3TCT6 Putative S1 RNA binding domain protein n=2 Tax=r... 463 e-129 UniRef50_B0SDL5 30S Ribosomal protein S1 n=6 Tax=Leptospira RepI... 459 e-127 UniRef50_Q027A8 SSU ribosomal protein S1P n=2 Tax=Acidobacteria ... 452 e-125 UniRef50_Q1IY12 RNA binding S1 n=9 Tax=Deinococci RepID=Q1IY12_D... 445 e-123 UniRef50_C1SLB2 4-hydroxy-3-methylbut-2-enyl diphosphate reducta... 434 e-120 UniRef50_Q3YRK4 SSU ribosomal protein S1P n=21 Tax=Rickettsiales... 434 e-120 UniRef50_D0J9D1 30S ribosomal protein S1 n=25 Tax=Bacteria RepID... 429 e-118 UniRef50_D0RRD0 30S ribosomal protein S1 n=1 Tax=alpha proteobac... 420 e-116 UniRef50_C0QZM2 30S ribosomal protein S1 n=2 Tax=Brachyspira Rep... 418 e-115 UniRef50_Q2GE01 Ribosomal protein S1 n=2 Tax=Neorickettsia RepID... 414 e-114 UniRef50_B5Y9T3 Ribosomal protein S1 n=1 Tax=Coprothermobacter p... 410 e-113 UniRef50_Q8KTS5 Ribosomal protein S1 n=1 Tax=Candidatus Tremblay... 408 e-112 UniRef50_A8F7S1 RNA binding S1 domain protein n=1 Tax=Thermotoga... 403 e-111 UniRef50_Q30ZT8 SSU ribosomal protein S1P n=1 Tax=Desulfovibrio ... 402 e-110 UniRef50_Q9ZKF6 30S ribosomal protein S1 n=44 Tax=Epsilonproteob... 400 e-110 UniRef50_C3XIZ7 30s ribosomal protein s1 n=6 Tax=Campylobacteral... 399 e-109 UniRef50_D1B5G8 RNA binding S1 domain protein n=3 Tax=Synergista... 397 e-109 UniRef50_C7LJY0 Putative ribosomal protein S1 n=1 Tax=Candidatus... 397 e-109 UniRef50_B8DPH9 RNA binding S1 domain protein n=4 Tax=Desulfovib... 396 e-108 UniRef50_C5CIV0 RNA binding S1 domain protein n=1 Tax=Kosmotoga ... 394 e-108 UniRef50_A8ZTZ3 RNA binding S1 domain protein n=1 Tax=Desulfococ... 393 e-108 UniRef50_Q7VJV6 Ribosomal protein S1 n=3 Tax=Helicobacter RepID=... 391 e-107 UniRef50_C6BYI5 RNA binding S1 domain protein n=4 Tax=Desulfovib... 390 e-107 UniRef50_D1Y3S9 30S ribosomal protein S1 n=1 Tax=Pyramidobacter ... 388 e-106 UniRef50_A5CF24 30S ribosomal protein S1 n=2 Tax=Orientia tsutsu... 387 e-106 UniRef50_Q1V1Q4 30S ribosomal protein S1 n=3 Tax=Candidatus Pela... 385 e-105 UniRef50_C0QM45 RpsA1 n=2 Tax=Desulfobacteraceae RepID=C0QM45_DESAH 382 e-104 UniRef50_B5YEY5 Ribosomal protein S1, putative n=2 Tax=Dictyoglo... 381 e-104 UniRef50_Q8RI52 4-hydroxy-3-methylbut-2-enyl diphosphate reducta... 381 e-104 UniRef50_C0GUF0 RNA binding S1 domain protein n=1 Tax=Desulfonat... 376 e-103 UniRef50_C7NE91 RNA binding S1 domain protein n=3 Tax=Leptotrich... 376 e-102 UniRef50_B1LBI3 RNA binding S1 domain protein n=5 Tax=Thermotoga... 375 e-102 UniRef50_Q2RIU7 Hydroxymethylbutenyl pyrophosphate reductase n=1... 373 e-102 UniRef50_A7HME7 Hydroxymethylbutenyl pyrophosphate reductase n=1... 373 e-102 UniRef50_B8J034 RNA binding S1 domain protein n=2 Tax=Desulfovib... 373 e-102 UniRef50_B0VFT2 Putative Ribosomal protein S1 n=1 Tax=Candidatus... 373 e-101 UniRef50_B7IE33 4-hydroxy-3-methylbut-2-enyl diphosphate reducta... 370 e-101 UniRef50_A1HTW2 Hydroxymethylbutenyl pyrophosphate reductase n=4... 368 e-100 UniRef50_D1AGH2 RNA binding S1 domain protein n=1 Tax=Sebaldella... 368 e-100 UniRef50_B1I3Y7 Hydroxymethylbutenyl pyrophosphate reductase n=3... 365 3e-99 UniRef50_P46836 30S ribosomal protein S1 n=166 Tax=Actinobacteri... 365 4e-99 UniRef50_Q67NT8 30S ribosomal protein S1 n=1 Tax=Symbiobacterium... 361 3e-98 UniRef50_A4J3N5 Hydroxymethylbutenyl pyrophosphate reductase n=3... 361 3e-98 UniRef50_O67462 Ribosomal protein S01 n=2 Tax=Aquificaceae RepID... 358 2e-97 UniRef50_D2L2R4 RNA binding S1 domain protein n=1 Tax=Desulfovib... 356 1e-96 UniRef50_C0GDV0 Hydroxymethylbutenyl pyrophosphate reductase n=1... 356 2e-96 UniRef50_UPI0001C3232B RNA binding S1 domain protein n=1 Tax=Con... 355 2e-96 UniRef50_A1QYS7 SSU ribosomal protein S1P n=23 Tax=Borrelia RepI... 355 3e-96 UniRef50_B8CWY2 4-hydroxy-3-methylbut-2-enyl diphosphate reducta... 351 6e-95 UniRef50_C0QT24 Ribosomal protein S01 n=1 Tax=Persephonella mari... 348 2e-94 UniRef50_C5S7U3 RNA binding S1 domain protein n=1 Tax=Allochroma... 348 3e-94 UniRef50_C8WX93 RNA binding S1 domain protein n=2 Tax=Alicycloba... 345 2e-93 UniRef50_B8G2Q3 Hydroxymethylbutenyl pyrophosphate reductase n=2... 344 5e-93 UniRef50_A9BGS2 RNA binding S1 domain protein n=1 Tax=Petrotoga ... 339 2e-91 UniRef50_B9L032 30S ribosomal protein S1 n=1 Tax=Thermomicrobium... 337 6e-91 UniRef50_D1C7V0 RNA binding S1 domain protein n=2 Tax=Chloroflex... 337 8e-91 UniRef50_A6TRF8 RNA binding S1 domain protein n=2 Tax=Alkaliphil... 336 1e-90 UniRef50_A6DP56 30S ribosomal protein S1 n=1 Tax=Lentisphaera ar... 335 2e-90 UniRef50_A6CB07 30S ribosomal protein S1 n=1 Tax=Planctomyces ma... 335 2e-90 UniRef50_C7RHT6 Hydroxymethylbutenyl pyrophosphate reductase n=8... 335 2e-90 UniRef50_A9AV75 RNA binding S1 domain protein n=5 Tax=Chloroflex... 334 6e-90 UniRef50_Q0AXA2 Hydroxymethylbutenyl pyrophosphate reductase n=1... 333 9e-90 UniRef50_A3DDC0 Hydroxymethylbutenyl pyrophosphate reductase n=7... 330 8e-89 UniRef50_D1VSI0 4-hydroxy-3-methylbut-2-enyl diphosphate reducta... 328 3e-88 UniRef50_B2A4N7 Hydroxymethylbutenyl pyrophosphate reductase n=1... 327 8e-88 UniRef50_B3WE79 30S Ribosomal protein S1 n=52 Tax=Firmicutes Rep... 326 9e-88 UniRef50_Q1D6H1 Ribosomal protein S1 family protein n=2 Tax=Cyst... 325 2e-87 UniRef50_C1DT56 Ribosomal protein S01 n=3 Tax=Sulfurihydrogenibi... 324 4e-87 UniRef50_Q1NY10 RNA binding S1 n=3 Tax=Deltaproteobacteria RepID... 324 6e-87 UniRef50_P50889 40S ribosomal protein S1 n=37 Tax=Bacilli RepID=... 323 8e-87 UniRef50_C7H149 4-hydroxy-3-methylbut-2-enyl diphosphate reducta... 321 5e-86 UniRef50_C8R0E8 RNA binding S1 domain protein n=1 Tax=Desulfuriv... 321 5e-86 UniRef50_A2ID48 RpsA n=1 Tax=Pasteuria ramosa RepID=A2ID48_9BACL 319 2e-85 UniRef50_B0MQU3 Putative uncharacterized protein n=2 Tax=Bacteri... 318 3e-85 UniRef50_D1AVV2 RNA binding S1 domain protein n=1 Tax=Streptobac... 315 3e-84 UniRef50_C1ZHL8 Ribosomal protein S1 n=1 Tax=Planctomyces limnop... 313 1e-83 UniRef50_C6PXA3 RNA binding S1 domain protein n=1 Tax=Clostridiu... 313 1e-83 UniRef50_A9ESM2 RpsA3 protein n=1 Tax=Sorangium cellulosum 'So c... 313 1e-83 UniRef50_C9LMR5 Hydroxymethylbutenyl pyrophosphate reductase/rib... 313 1e-83 UniRef50_B1C7U3 Putative uncharacterized protein n=1 Tax=Anaerof... 312 2e-83 UniRef50_A9B766 RNA binding S1 domain protein n=6 Tax=Chloroflex... 312 2e-83 UniRef50_Q49XT0 30S ribosomal protein S1 n=6 Tax=Staphylococcace... 311 3e-83 UniRef50_UPI00016C0B56 30S ribosomal protein S1 n=1 Tax=Epulopis... 309 1e-82 UniRef50_Q5HFU7 30S ribosomal protein S1 n=61 Tax=Staphylococcus... 309 2e-82 UniRef50_Q0TNG2 Ribosomal protein S1 family n=9 Tax=Clostridium ... 308 3e-82 UniRef50_A9KLR6 Hydroxymethylbutenyl pyrophosphate reductase n=5... 307 9e-82 UniRef50_C9LUH9 Hydroxymethylbutenyl pyrophosphate reductase n=1... 304 5e-81 UniRef50_B3T9S8 Putative S1 RNA binding domain protein n=1 Tax=u... 302 2e-80 UniRef50_O06000 30S ribosomal protein S1 homolog n=76 Tax=Bacill... 302 3e-80 UniRef50_Q5M0R3 30S ribosomal protein S1 n=88 Tax=Bacilli RepID=... 301 3e-80 UniRef50_A4IQA6 30S ribosomal protein S1 n=10 Tax=Bacillaceae Re... 301 5e-80 UniRef50_A8YV34 30S ribosomal protein S1 n=29 Tax=Lactobacillus ... 301 6e-80 UniRef50_A1AM10 SSU ribosomal protein S1P n=10 Tax=Desulfuromona... 301 6e-80 UniRef50_P38494 30S ribosomal protein S1 homolog n=22 Tax=Bacill... 300 7e-80 UniRef50_C5NX49 30S ribosomal protein S1 n=1 Tax=Gemella haemoly... 299 1e-79 UniRef50_D1BMA5 Hydroxymethylbutenyl pyrophosphate reductase n=3... 298 4e-79 UniRef50_D1PP74 4-hydroxy-3-methylbut-2-enyl diphosphate reducta... 296 2e-78 UniRef50_UPI00017435B0 LytB protein n=1 Tax=candidate division T... 296 2e-78 UniRef50_Q7UWH7 30S ribosomal protein S1 n=1 Tax=Rhodopirellula ... 296 2e-78 UniRef50_A7G2Q4 Ribosomal protein S1 n=13 Tax=Clostridium RepID=... 295 3e-78 UniRef50_B0KVD5 30S ribosomal protein S1 n=1 Tax=uncultured cand... 293 1e-77 UniRef50_D1CBU2 RNA binding S1 domain protein n=1 Tax=Thermobacu... 291 3e-77 UniRef50_A8Z6B9 Putative ribosomal protein S1 n=1 Tax=Candidatus... 290 1e-76 UniRef50_C4V2L6 Possible 30S ribosomal protein S1 n=2 Tax=Seleno... 288 3e-76 UniRef50_D0LLG7 RNA binding S1 domain protein n=1 Tax=Haliangium... 286 2e-75 UniRef50_A3ZTD7 30S ribosomal protein S1 n=2 Tax=Bacteria RepID=... 286 2e-75 UniRef50_D2R2F1 RNA binding S1 domain protein n=1 Tax=Pirellula ... 284 5e-75 UniRef50_UPI00016C5864 30S ribosomal protein S1 n=1 Tax=Gemmata ... 284 6e-75 UniRef50_D2RKJ8 Hydroxymethylbutenyl pyrophosphate reductase n=3... 278 3e-73 UniRef50_A6LQP2 RNA binding S1 domain protein n=7 Tax=Clostridiu... 276 2e-72 UniRef50_B4U6I5 RNA binding S1 domain protein n=1 Tax=Hydrogenob... 276 2e-72 UniRef50_UPI00016B22D3 RNA binding S1 domain protein n=2 Tax=can... 275 3e-72 UniRef50_C6P7Z4 RNA binding S1 domain protein n=1 Tax=Thermoanae... 271 5e-71 UniRef50_B0K198 RNA binding S1 domain protein n=7 Tax=Thermoanae... 266 1e-69 UniRef50_Q4EP69 Ribosomal protein S1, putative (Fragment) n=1 Ta... 261 4e-68 UniRef50_Q6MNP5 30S ribosomal protein S1 n=1 Tax=Bdellovibrio ba... 261 6e-68 UniRef50_A6GGH5 Ribosomal protein S1 n=1 Tax=Plesiocystis pacifi... 257 7e-67 UniRef50_B4UDY4 RNA binding S1 domain protein n=4 Tax=Anaeromyxo... 254 6e-66 UniRef50_Q14690 Protein RRP5 homolog n=24 Tax=Metazoa RepID=RRP5... 254 8e-66 UniRef50_A9NGK8 Small subunit ribosomal protein S1 n=1 Tax=Achol... 254 8e-66 UniRef50_C9XMD9 Putative 30S ribosomal protein S1 n=7 Tax=Clostr... 249 2e-64 UniRef50_Q7X2Y7 Putative 30S ribosomal protein S1 (Fragment) n=1... 249 3e-64 UniRef50_A5N6D1 30S ribosomal protein S1 n=2 Tax=Clostridium klu... 248 3e-64 UniRef50_Q0PQN6 30S ribosomal subunit protein S1 (Fragment) n=2 ... 240 1e-61 UniRef50_P73530 30S ribosomal protein S1 homolog A n=61 Tax=cell... 239 3e-61 UniRef50_C1G573 rRNA biogenesis protein RRP5 n=4 Tax=Onygenales ... 237 7e-61 UniRef50_UPI000194C80A PREDICTED: programmed cell death 11 n=2 T... 237 9e-61 UniRef50_A4XKP1 Hydroxymethylbutenyl pyrophosphate reductase n=1... 236 1e-60 UniRef50_UPI0000F2B0DB PREDICTED: similar to KIAA0185 n=1 Tax=Mo... 236 2e-60 UniRef50_A8V2R4 Ribosomal protein S01 n=1 Tax=Hydrogenivirga sp.... 234 8e-60 UniRef50_B9MRX3 Hydroxymethylbutenyl pyrophosphate reductase n=1... 233 1e-59 UniRef50_B9L9K6 30S ribosomal protein S1 n=2 Tax=Nautiliaceae Re... 233 1e-59 UniRef50_A2R624 Function: RRP5 is required for formation of both... 227 9e-58 UniRef50_B0SDD9 30S Ribosomal protein S1 n=6 Tax=Leptospira RepI... 226 1e-57 UniRef50_A5V0B5 RNA binding S1 domain protein n=3 Tax=Chloroflex... 225 2e-57 UniRef50_C9SZ75 rRNA biogenesis protein RRP5 n=5 Tax=Sordariomyc... 225 4e-57 UniRef50_B4WRF0 S1 RNA binding domain protein n=1 Tax=Synechococ... 224 6e-57 UniRef50_A6S458 Putative uncharacterized protein n=1 Tax=Botryot... 224 6e-57 UniRef50_A4RTM3 Plastid ribosomal protein S1, imported to chloro... 224 7e-57 UniRef50_Q5KH56 RRNA processing-related protein, putative n=2 Ta... 222 3e-56 UniRef50_C1EEV9 Predicted protein n=2 Tax=Micromonas RepID=C1EEV... 221 5e-56 UniRef50_Q70DX8 Plastid ribosomal protein S1 n=6 Tax=Viridiplant... 221 6e-56 UniRef50_D1Z6Q4 Whole genome shotgun sequence assembly, scaffold... 220 9e-56 UniRef50_P29344 30S ribosomal protein S1, chloroplastic n=21 Tax... 220 1e-55 UniRef50_A9SPX0 Predicted protein n=2 Tax=cellular organisms Rep... 219 3e-55 UniRef50_B1XJQ5 30S ribosomal protein S1 like protein n=1 Tax=Sy... 217 8e-55 UniRef50_O33698 30S ribosomal protein S1 n=12 Tax=Cyanobacteria ... 215 3e-54 UniRef50_A9KQA3 RNA binding S1 domain protein n=1 Tax=Clostridiu... 214 7e-54 UniRef50_C4FZ56 Putative uncharacterized protein n=1 Tax=Abiotro... 214 7e-54 UniRef50_P74142 30S ribosomal protein S1 homolog B n=14 Tax=Cyan... 213 1e-53 UniRef50_B0CR68 Predicted protein n=3 Tax=Agaricales RepID=B0CR6... 212 3e-53 UniRef50_A4QP01 Pdcd11 protein n=4 Tax=Clupeocephala RepID=A4QP0... 212 3e-53 UniRef50_O74835 rRNA biogenesis protein rrp5 n=1 Tax=Schizosacch... 212 3e-53 UniRef50_B8JIP9 Programmed cell death 11 n=5 Tax=Clupeocephala R... 211 5e-53 UniRef50_B7FU58 Predicted protein (Fragment) n=1 Tax=Phaeodactyl... 210 9e-53 UniRef50_B8C8K9 RS1, ribosomal protein 1 (Fragment) n=1 Tax=Thal... 210 1e-52 UniRef50_A4S384 Predicted protein n=2 Tax=Ostreococcus RepID=A4S... 209 2e-52 UniRef50_A9WBG5 RNA binding S1 domain protein n=2 Tax=Chloroflex... 209 3e-52 UniRef50_C4G9K7 Putative uncharacterized protein n=1 Tax=Shuttle... 207 7e-52 UniRef50_A0JMT9 LOC779090 protein (Fragment) n=5 Tax=Tetrapoda R... 207 8e-52 UniRef50_A5GJG3 30S ribosomal protein S1 n=1 Tax=Synechococcus s... 207 9e-52 UniRef50_A9B5U0 RNA binding S1 domain protein n=1 Tax=Herpetosip... 207 1e-51 UniRef50_C6JH83 Putative uncharacterized protein n=2 Tax=Clostri... 206 2e-51 UniRef50_B8HSI0 RNA binding S1 domain protein n=1 Tax=Cyanothece... 206 2e-51 UniRef50_B2KCI0 RNA binding S1 domain protein n=1 Tax=Elusimicro... 206 2e-51 UniRef50_A7SBJ3 Predicted protein n=2 Tax=Nematostella vectensis... 205 3e-51 UniRef50_C5RED5 RNA binding S1 domain protein n=1 Tax=Clostridiu... 205 3e-51 UniRef50_B3SB29 Putative uncharacterized protein n=1 Tax=Trichop... 205 3e-51 UniRef50_C3XPK3 Putative uncharacterized protein n=1 Tax=Branchi... 205 5e-51 UniRef50_B0MBX8 Putative uncharacterized protein n=7 Tax=Clostri... 204 6e-51 UniRef50_B6K2R4 U3 snoRNP-associated protein Rrp5 n=1 Tax=Schizo... 203 1e-50 UniRef50_C5XCN3 Putative uncharacterized protein Sb02g006000 n=1... 200 2e-49 UniRef50_Q05022 rRNA biogenesis protein RRP5 n=10 Tax=Saccharomy... 197 1e-48 UniRef50_Q46GP7 SSU ribosomal protein S1P n=24 Tax=cellular orga... 195 4e-48 UniRef50_A5DPT1 Putative uncharacterized protein n=2 Tax=Pichia ... 193 2e-47 UniRef50_P51345 30S ribosomal protein S1, chloroplastic n=2 Tax=... 191 5e-47 UniRef50_Q6BJC7 DEHA2G03410p n=4 Tax=Saccharomycetales RepID=Q6B... 190 1e-46 UniRef50_UPI0000E22681 PREDICTED: programmed cell death 11 n=1 T... 190 2e-46 UniRef50_B2W7W2 rRNA biogenesis protein RRP5 n=1 Tax=Pyrenophora... 188 4e-46 UniRef50_Q9LHM6 Pre-rRNA processing protein RRP5 n=6 Tax=rosids ... 188 5e-46 UniRef50_UPI00018545D5 30S ribosomal protein S1 n=2 Tax=Helicoba... 188 5e-46 UniRef50_Q31C04 SSU ribosomal protein S1P n=6 Tax=Prochlorococcu... 187 8e-46 UniRef50_Q0UD83 Putative uncharacterized protein n=1 Tax=Phaeosp... 187 1e-45 UniRef50_B9WAR4 rRNA biogenesis protein, putative n=5 Tax=Saccha... 185 5e-45 UniRef50_B8PP03 Predicted protein (Fragment) n=1 Tax=Postia plac... 182 4e-44 UniRef50_A8PVH2 Putative uncharacterized protein n=1 Tax=Malasse... 179 3e-43 UniRef50_C1ECK5 Predicted protein n=1 Tax=Micromonas sp. RCC299 ... 178 3e-43 UniRef50_Q6C430 YALI0E30217p n=1 Tax=Yarrowia lipolytica RepID=Q... 178 4e-43 UniRef50_Q7XYL3 Ribosomal protein rpS1 n=1 Tax=Bigelowiella nata... 178 4e-43 UniRef50_C5DF89 KLTH0D13156p n=2 Tax=Saccharomycetaceae RepID=C5... 178 5e-43 UniRef50_D2AQV7 30S ribosomal protein S1 n=5 Tax=Actinomycetales... 177 1e-42 UniRef50_A9WG06 RNA binding S1 domain protein n=3 Tax=Chloroflex... 176 2e-42 UniRef50_Q6B8Z9 30S ribosomal protein S1 n=1 Tax=Gracilaria tenu... 176 2e-42 UniRef50_C6LB27 Putative S1 RNA binding domain protein n=2 Tax=C... 176 2e-42 UniRef50_Q10MB3 30S ribosomal protein S1, chloroplast, putative,... 176 2e-42 UniRef50_C4R3F9 RNA binding protein with preference for single s... 175 4e-42 UniRef50_Q4PGT5 Putative uncharacterized protein n=1 Tax=Ustilag... 175 5e-42 UniRef50_D1IA06 Whole genome shotgun sequence of line PN40024, s... 175 5e-42 UniRef50_B2XT45 30S ribosomal protein S1 n=2 Tax=Heterosigma aka... 175 6e-42 UniRef50_UPI0001BC83D1 30S ribosomal protein S1 n=1 Tax=Bacteroi... 172 4e-41 UniRef50_UPI0001983EAA PREDICTED: hypothetical protein n=1 Tax=V... 171 8e-41 UniRef50_UPI0000E4A1DE PREDICTED: hypothetical protein n=2 Tax=S... 169 3e-40 UniRef50_D0NSW6 rRNA biogenesis protein rrp5 n=1 Tax=Phytophthor... 168 5e-40 UniRef50_C5ES10 RNA binding S1 domain-containing protein n=2 Tax... 165 4e-39 UniRef50_D1X7G9 RNA binding S1 domain protein n=1 Tax=Streptomyc... 164 6e-39 UniRef50_C9NIQ1 RNA binding S1 domain protein n=2 Tax=Streptomyc... 163 1e-38 UniRef50_C9LAT8 Ribosomal protein S1 n=10 Tax=Clostridiales RepI... 156 2e-36 UniRef50_A9UQD5 Predicted protein (Fragment) n=1 Tax=Monosiga br... 155 5e-36 UniRef50_C1NA95 Predicted protein n=1 Tax=Micromonas pusilla CCM... 153 2e-35 UniRef50_A8J2S3 RNA binding protein n=1 Tax=Chlamydomonas reinha... 152 4e-35 UniRef50_C0DB62 Putative uncharacterized protein n=1 Tax=Clostri... 152 5e-35 UniRef50_UPI0001925B6E PREDICTED: similar to predicted protein, ... 151 6e-35 UniRef50_B6TZ31 RNA binding S1 n=4 Tax=Andropogoneae RepID=B6TZ3... 150 1e-34 UniRef50_D1A3N7 RNA binding S1 domain protein n=1 Tax=Thermomono... 150 2e-34 UniRef50_Q9LK47 Similarity to 30s ribosomal protein s1 n=5 Tax=M... 150 2e-34 UniRef50_A6NVV1 Putative uncharacterized protein n=1 Tax=Bactero... 149 2e-34 UniRef50_Q0D7X0 Os07g0203300 protein (Fragment) n=7 Tax=Magnolio... 148 4e-34 UniRef50_A9SNI7 Predicted protein n=3 Tax=Embryophyta RepID=A9SN... 148 4e-34 UniRef50_D1J1D7 Whole genome shotgun sequence of line PN40024, s... 148 6e-34 UniRef50_A7M5P8 Putative uncharacterized protein n=1 Tax=Bactero... 147 8e-34 UniRef50_Q5ZC75 Os01g0589000 protein n=4 Tax=Poaceae RepID=Q5ZC7... 147 9e-34 UniRef50_Q0DGF0 Os05g0535800 protein n=4 Tax=Poaceae RepID=Q0DGF... 146 3e-33 UniRef50_UPI0001925B6F PREDICTED: similar to predicted protein n... 143 2e-32 Sequences not found previously or not previously below threshold: >UniRef50_Q48082 30S ribosomal protein S1 n=129 Tax=Proteobacteria RepID=RS1_HAEIN Length = 549 Score = 601 bits (1549), Expect = e-170, Method: Composition-based stats. Identities = 433/557 (77%), Positives = 492/557 (88%), Gaps = 8/557 (1%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL 60 M+ESFAQLFEESLK +ETR GSIV G VVAI K VLVDAGLKSESAIP +F NAQGEL Sbjct: 1 MSESFAQLFEESLKVLETRQGSIVSGTVVAIQKGFVLVDAGLKSESAIPVAEFLNAQGEL 60 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 EIQVGD V+VALDAVEDGFGET LSREKA RHE+WI LEKAYE+ TV G+I GKVKGGF Sbjct: 61 EIQVGDTVNVALDAVEDGFGETKLSREKAVRHESWIELEKAYEEKATVIGLIXGKVKGGF 120 Query: 121 TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 TVELNG+RAFLPGSLVD RP R+ HL GKELEFKVIKLDQKRNNVVVSRRAVIESENS Sbjct: 121 TVELNGVRAFLPGSLVDTRPAREADHLLGKELEFKVIKLDQKRNNVVVSRRAVIESENSQ 180 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 ER+Q+LENL EG EVKG+VKNLT+YGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE Sbjct: 181 EREQVLENLVEGSEVKGVVKNLTEYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 Query: 241 ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV 300 +TVKVLKFD++RTRVSLGLKQLG+DPW AIA+ +P +KLTG+VTNLTDYGCFVEI +GV Sbjct: 241 VTVKVLKFDKDRTRVSLGLKQLGQDPWAAIAENHPVNSKLTGKVTNLTDYGCFVEILDGV 300 Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAET 360 EGLVHVSEMDWTNKNIHPSKVV++GD VEVMVL+IDEERRRISLGLKQCKANPW QFA+T Sbjct: 301 EGLVHVSEMDWTNKNIHPSKVVSLGDTVEVMVLEIDEERRRISLGLKQCKANPWTQFADT 360 Query: 361 HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL 420 HNKGD+V GKIKSITDFGIFIGL+GGIDGLVHLSDISW+++GEEAVR+YKKGDE++AVVL Sbjct: 361 HNKGDKVTGKIKSITDFGIFIGLEGGIDGLVHLSDISWSISGEEAVRQYKKGDEVSAVVL 420 Query: 421 QVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRA 480 VDA +ERISLG+KQL EDPFNN+VA+NKKGA+V+ V DAKGA VELA GVEGY+R+ Sbjct: 421 AVDAVKERISLGIKQLEEDPFNNFVAINKKGAVVSATVVEADAKGAKVELAGGVEGYIRS 480 Query: 481 SEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDA 540 ++ + + ++VGD VEAK+TGVDRK+R + LSV+AKD+A+E A+A+VN +++ Sbjct: 481 ADLTSE--------VAVGDVVEAKYTGVDRKSRIVHLSVKAKDQAEEAAAVASVNNKQED 532 Query: 541 NFSNNAMAEAFKAAKGE 557 NAMAEAFKAAKGE Sbjct: 533 IVIPNAMAEAFKAAKGE 549 >UniRef50_B8FI70 Ribosomal protein S1 n=14 Tax=Proteobacteria RepID=B8FI70_DESAA Length = 616 Score = 576 bits (1484), Expect = e-163, Method: Composition-based stats. Identities = 266/550 (48%), Positives = 365/550 (66%), Gaps = 5/550 (0%) Query: 5 FAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQV 64 F L+EES K E G +V G ++ IDKD VLVD G KSE IP +F G + ++ Sbjct: 57 FMALYEESFKRFE--EGEVVTGKIIQIDKDYVLVDIGYKSEGLIPIREFIEPDGTVAAEI 114 Query: 65 GDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL 124 GDEV+V ++ ++ ++S+EKA + + W ++ AYE+ V G I +VKGGF+V++ Sbjct: 115 GDEVEVMVERLDSEDEGVMVSKEKASKIKVWEEIKVAYEEEGIVEGTITHRVKGGFSVDI 174 Query: 125 NGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQ 184 G+ AFLPGS VD+RPVRD + GK FKV+K ++KR+N+V+SRR ++E E +R Sbjct: 175 -GVPAFLPGSQVDLRPVRDLDSMVGKVFTFKVLKYNRKRSNIVLSRRVILEKEREEQRSS 233 Query: 185 LLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 L+N+ EG V+G+VKN+T+YG FVDLGG+DGLLHITD++W RVKHPSE+ VG ITVK Sbjct: 234 TLQNIHEGKVVEGVVKNITEYGVFVDLGGIDGLLHITDISWGRVKHPSELFGVGQTITVK 293 Query: 245 VLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLV 304 VL D ER RVSLG+KQL EDPW + RYP G +++G+V +LTDYG FVE+EEG+EGL+ Sbjct: 294 VLDLDLERERVSLGMKQLKEDPWTTASDRYPVGERVSGKVVSLTDYGAFVELEEGIEGLI 353 Query: 305 HVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKG 364 HVSEM WT K HPSKVV+VGD +E +VLDI RR+SLG+KQ NPW E + G Sbjct: 354 HVSEMSWTRKIRHPSKVVSVGDDLEAVVLDIKPSNRRVSLGMKQVAPNPWDVIGEKYPIG 413 Query: 365 DRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDA 424 +EG+IK+ITDFG+FIG+D GIDGLVH+SDISW YKKGDE+ A+VL +D Sbjct: 414 TTIEGRIKNITDFGMFIGIDEGIDGLVHISDISWTKRINHPGDVYKKGDEVRAIVLHIDR 473 Query: 425 ERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEAS 484 E ER SLG+KQL DP+ + G V G +T+V G VEL +G+EG + SE + Sbjct: 474 ENERFSLGIKQLEPDPWETISERYQVGTKVNGLITSVTDFGIFVELEEGIEGLVHVSEVA 533 Query: 485 RDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSN 544 +++V+ +VGD VE ++ K R I LS++ +E +++ ++ Sbjct: 534 KEKVKTPVGQFNVGDTVETVVVNINPKERRIGLSIKRLEEDEQEGYFNEYMA--SNKPAS 591 Query: 545 NAMAEAFKAA 554 +A+ EAF+ A Sbjct: 592 SALGEAFQRA 601 >UniRef50_Q89AJ3 30S ribosomal protein S1 n=296 Tax=Proteobacteria RepID=RS1_BUCBP Length = 566 Score = 574 bits (1479), Expect = e-162, Method: Composition-based stats. Identities = 397/564 (70%), Positives = 468/564 (82%), Gaps = 10/564 (1%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL 60 MTESFAQLFEESLK I+TRPGSI++G VVAI KD +LVDA LKSES IP +QFKN+QGEL Sbjct: 1 MTESFAQLFEESLKNIKTRPGSIIQGTVVAITKDTILVDAKLKSESKIPIDQFKNSQGEL 60 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 E++VGD++DVALDA+EDGFGETLLSREKAKRHEAW+TLE+AY+D++TV G+INGKVKGGF Sbjct: 61 EVKVGDQIDVALDAIEDGFGETLLSREKAKRHEAWLTLEQAYKDSKTVVGLINGKVKGGF 120 Query: 121 TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 TVEL IRAFLPGSLVD+RPVR+T+HLEGKELEFKVIKLDQKRNNVVVSRRAVIESE +A Sbjct: 121 TVELEDIRAFLPGSLVDIRPVRETMHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEYNA 180 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 ER+ LLE LQEG+ V GIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVN+GDE Sbjct: 181 ERNLLLETLQEGLIVSGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNIGDE 240 Query: 241 ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV 300 + +K+LKFDRE+ RVSLGLKQL +DPW I++RYPE TK+TGRVTNLTDYGCFVEIEEGV Sbjct: 241 VKIKILKFDREKIRVSLGLKQLSDDPWTKISERYPEKTKITGRVTNLTDYGCFVEIEEGV 300 Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAET 360 EGLVHVSEMDWTNKNIHPSK+V V VV+VM+LDIDEERRRISLGLKQCK NPW +F++ Sbjct: 301 EGLVHVSEMDWTNKNIHPSKMVQVNSVVKVMILDIDEERRRISLGLKQCKNNPWMEFSKK 360 Query: 361 HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL 420 +NKG V GKIKSITDFGIFIGL+G IDGLVHLSDISWN++GEE+V++YKKG+E+ AVVL Sbjct: 361 YNKGSHVVGKIKSITDFGIFIGLEGSIDGLVHLSDISWNISGEESVKKYKKGEEVLAVVL 420 Query: 421 QVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRA 480 QVD +RERISLG+KQL EDPF +V+ +KKG++V+G + +D V L++ ++G ++ Sbjct: 421 QVDPDRERISLGIKQLQEDPFAKYVSSHKKGSLVSGTIKKIDNNVIVVSLSEHIDGLIKF 480 Query: 481 SEASRD----RVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNK 536 S + +G+ VE K +D+K R I LS+ K E + I N Sbjct: 481 LNISDEIMNVHDNKPWNKAKIGEIVEVKLNSIDKKERIIYLSILEKQELKISNDIKKNNS 540 Query: 537 -----QEDANFSNNAMAEAFKAAK 555 +D NFS NAM EAFKAAK Sbjct: 541 HKQEIDKDKNFS-NAMTEAFKAAK 563 >UniRef50_C4XQS6 30S ribosomal protein S1 n=3 Tax=Desulfovibrio RepID=C4XQS6_DESMR Length = 576 Score = 568 bits (1464), Expect = e-160, Method: Composition-based stats. Identities = 262/559 (46%), Positives = 375/559 (67%), Gaps = 3/559 (0%) Query: 1 MTESFAQLFEESLKE--IETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQG 58 M +F E L E + GSI GVVV I K+ VLVD KSE IP +F +A G Sbjct: 15 MEVNFEDALENYLNEDFGDLEEGSITPGVVVRIGKEHVLVDVNFKSEGQIPVSEFMDALG 74 Query: 59 ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 ELE++VGD++DV + + + G ++SRE+AKR + + LE+ E + ++G I ++KG Sbjct: 75 ELEVKVGDQIDVYVVSKNESEGTIIMSRERAKRMQLFDKLEEIQEKDDVISGKIVRRIKG 134 Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 G+TV+L G+ AFLPGS VD+RPV D L G+E EF+V+K++++R+NV+VSRR ++E Sbjct: 135 GYTVDLGGVEAFLPGSHVDLRPVPDMDALVGQEFEFRVLKINRRRSNVIVSRRVLLEERR 194 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVG 238 + R LL+ L+EG V G VKN+T+YG FVDLGG+DGL+HITDM+WKR+KHP E+V++G Sbjct: 195 DSMRKDLLKTLEEGQTVTGRVKNITEYGVFVDLGGLDGLMHITDMSWKRIKHPKELVHLG 254 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE 298 DE+ +KVL FD+++ +VSLG+KQL DPW IA +YPE T+++G+VTNL DYG FVE+E Sbjct: 255 DELELKVLSFDQDKQKVSLGMKQLIADPWENIAGKYPEDTRMSGKVTNLVDYGAFVELEP 314 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFA 358 GVEGLVH+SEM WT K HPS++V+VGD VEV+VL +D +++RISLG+KQ + NPW A Sbjct: 315 GVEGLVHISEMSWTRKLRHPSQMVHVGDEVEVVVLSVDPDKKRISLGMKQVRPNPWDIVA 374 Query: 359 ETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAV 418 E + +G +EG +K+IT+FGIFIG++ GIDGL+H+SDISW +K GD + A Sbjct: 375 EKYPEGTILEGSVKNITEFGIFIGIEDGIDGLIHVSDISWTKKVRHPGEMFKSGDIVMAK 434 Query: 419 VLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYL 478 VL VD E E+ +LG+KQL+EDP+ GA+V G VT + G VE+ +G+EG + Sbjct: 435 VLTVDKENEKFTLGIKQLSEDPWTRVPDTYPVGAMVKGTVTNITDFGLFVEVEEGIEGLV 494 Query: 479 RASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQE 538 SE SR +V+ + GDE+EAK V R + LS+++ + ++K Sbjct: 495 HVSEISRKKVKTPAEIYKEGDEIEAKVIHVSADERRLGLSIKSIKDEEDKKKAKEFRTAG 554 Query: 539 DANFSNNAMAEAFKAAKGE 557 ++ +N + E + E Sbjct: 555 PSDTGSN-LGELLRQKLEE 572 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 98/394 (24%), Positives = 172/394 (43%), Gaps = 16/394 (4%) Query: 163 RNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHIT 221 +NN + E ++ +L+EG G+V + VD+ +G + ++ Sbjct: 8 QNNSNMDMEVNFEDALENYLNEDFGDLEEGSITPGVVVRIGKEHVLVDVNFKSEGQIPVS 67 Query: 222 DMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGL-KQLGEDPWVAIAKRYPEGTKL 280 + + V VGD+I V V+ + + + + + + + + + Sbjct: 68 EFMDALGEL---EVKVGDQIDVYVVSKNESEGTIIMSRERAKRMQLFDKLEEIQEKDDVI 124 Query: 281 TGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERR 340 +G++ G V++ GVE + S +D P VG E VL I+ R Sbjct: 125 SGKIVRRIKGGYTVDLG-GVEAFLPGSHVDLRPV---PDMDALVGQEFEFRVLKINRRRS 180 Query: 341 RISLGLKQCKANPWQQF----AETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDI 396 + + + +T +G V G++K+IT++G+F+ L GG+DGL+H++D+ Sbjct: 181 NVIVSRRVLLEERRDSMRKDLLKTLEEGQTVTGRVKNITEYGVFVDL-GGLDGLMHITDM 239 Query: 397 SWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTG 456 SW + GDE+ VL D +++++SLG+KQL DP+ N + ++G Sbjct: 240 SWKRI-KHPKELVHLGDELELKVLSFDQDKQKVSLGMKQLIADPWENIAGKYPEDTRMSG 298 Query: 457 KVTAVDAKGATVELADGVEGYLRASEASRDR-VEDATLVLSVGDEVEAKFTGVDRKNRAI 515 KVT + GA VEL GVEG + SE S R + + ++ VGDEVE VD + I Sbjct: 299 KVTNLVDYGAFVELEPGVEGLVHISEMSWTRKLRHPSQMVHVGDEVEVVVLSVDPDKKRI 358 Query: 516 SLSVRAKDEADEKDAIATVNKQEDANFSNNAMAE 549 SL ++ + S + E Sbjct: 359 SLGMKQVRPNPWDIVAEKYPEGTILEGSVKNITE 392 >UniRef50_D0LJ72 Ribosomal protein S1 n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LJ72_HALO1 Length = 608 Score = 564 bits (1454), Expect = e-159, Method: Composition-based stats. Identities = 260/553 (47%), Positives = 366/553 (66%), Gaps = 4/553 (0%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE 61 ESFA LFEESL + E + G I++G V+++ KD +VD G KSE I ++F+ A G + Sbjct: 12 EESFAALFEESLNQEEVKEGDILQGTVISVGKDYAIVDIGYKSEGQIAIDEFRQADGGIL 71 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 + GD +DV L++ E+ G +LS+EKA R + W + A E E + G I +VKGG + Sbjct: 72 VTPGDVIDVLLESRENEAGMCVLSKEKADRFKVWDEISAACERDELIEGTITQRVKGGLS 131 Query: 122 VEL-NGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 V + G++AFLPGS VD+RPVR+ G+ +FKVIK ++KR N+V+SRR ++E E +A Sbjct: 132 VTIRGGVKAFLPGSQVDLRPVRNLDAFIGQSYKFKVIKFNKKRGNIVLSRRVLLEKERAA 191 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 ++ LE L+EG EV+GIVKNLT+YGAF+DLGG+DGLLHITDM+W RV HPSE+ VGD Sbjct: 192 LKESTLERLKEGQEVEGIVKNLTEYGAFIDLGGIDGLLHITDMSWGRVNHPSELFQVGDH 251 Query: 241 ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV 300 + VKVLKF+ + RVSLGLKQ+ EDPW ++Y GT + G+V +L DYG F+E+EEG+ Sbjct: 252 VRVKVLKFNADTERVSLGLKQISEDPWSKAQEKYIPGTVVRGKVVSLKDYGAFIELEEGI 311 Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAET 360 EGLVH+SEM WT + HPSK+V VGDVV+ +VLD+D + RISLG+KQ + NP++Q E Sbjct: 312 EGLVHISEMSWTRRVKHPSKMVAVGDVVDAVVLDVDVKNNRISLGMKQLEPNPYEQLNEK 371 Query: 361 HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL 420 + G V+GK+++I DFGIF+ ++ GIDGLVH+SD+SW + ++KGDE+ AV+L Sbjct: 372 YPPGTVVKGKVRNIADFGIFVEIEEGIDGLVHVSDMSWTQRVKHPSEMFQKGDEVEAVLL 431 Query: 421 QVDA---ERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGY 477 +D E+ +ISLG+KQL DP++ G IV KV V GA VE+ G+EG Sbjct: 432 NIDTADGEKPKISLGIKQLNTDPWDRIPFDFPPGKIVDAKVLKVLDFGAFVEIEKGIEGL 491 Query: 478 LRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQ 537 + SE S + V+D VL+ G E++ + VD + R I LSV++ + A E N Sbjct: 492 VHVSEISDEHVDDPRKVLTPGQELKVQILSVDPQERKIGLSVKSANRATEMAEAQGYNSP 551 Query: 538 EDANFSNNAMAEA 550 + + A Sbjct: 552 TAGTATLGDVMRA 564 >UniRef50_Q1IHI9 SSU ribosomal protein S1P n=6 Tax=Bacteria RepID=Q1IHI9_ACIBL Length = 609 Score = 563 bits (1450), Expect = e-159, Method: Composition-based stats. Identities = 252/558 (45%), Positives = 360/558 (64%), Gaps = 5/558 (0%) Query: 1 MTESFA---QLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ 57 MTE FA + FE+ E ++ G V++I V+VD GLKSE +P E+ K+ Sbjct: 50 MTEDFATALESFEQEQSEQALNEDRVLVGRVLSITPQYVVVDVGLKSEGVVPIEEVKDHD 109 Query: 58 GELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVK 117 G + Q G+E+ V + G LS +KA+R +AW +EKAY D ++ ++K Sbjct: 110 GNVSFQPGEEIAVMQEKGHTEEGYVHLSHQKAQRLKAWDEIEKAYNDKSSIKARAIDRIK 169 Query: 118 GGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESE 177 GG TV++ G RAFLPGS VD+RPVR+ L+G ELE ++IKL++KR N+VVSR+ ++E E Sbjct: 170 GGLTVDIMGARAFLPGSQVDLRPVRNLDALKGHELEVRIIKLNKKRGNIVVSRKQILEEE 229 Query: 178 NSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNV 237 + ++ + LE+L E + G VKNLTDYGAFVDLGG+DGLLHITDM+W R+ HP ++V V Sbjct: 230 QNDKKSKTLEHLNEDAVLTGTVKNLTDYGAFVDLGGIDGLLHITDMSWGRLTHPRDLVQV 289 Query: 238 GDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE 297 GD+I VKVLKFDR++ RVSLG KQL DPW+ ++RYP G ++ GRV ++TDYG F+E+E Sbjct: 290 GDQIQVKVLKFDRDKQRVSLGFKQLTPDPWLDASERYPIGARVHGRVISVTDYGAFIELE 349 Query: 298 EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQF 357 +G+EGLVHVSEM W+ + HPSK+VNVGD V+ +VL+++ + RRISLGLKQ + NPW+ Sbjct: 350 QGIEGLVHVSEMTWSKRMKHPSKIVNVGDQVDAVVLNVNPQERRISLGLKQLETNPWESL 409 Query: 358 AETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAA 417 E G VEGK++++TDFG FI ++ GIDGLVH+S++SW + KKGD++ A Sbjct: 410 HEKFPVGGVVEGKVRNLTDFGAFIEIEDGIDGLVHVSNLSWTKRVKHPSEVLKKGDKVKA 469 Query: 418 VVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGY 477 VVL ++ + R+SLGVKQL D + + ++ G I+ GKV + + GA +E+ADGVEG Sbjct: 470 VVLAIEPDNRRLSLGVKQLQPDVWETFFETHRVGDIIHGKVLRLASFGAFIEIADGVEGL 529 Query: 478 LRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQ 537 SEAS + A L L G E + K ++ + + LS+RA E + I Sbjct: 530 CHNSEASDEHG--APLKLEPGQEFDFKIIKMNPDEKKVGLSLRAVGEEASRVEIENYKAP 587 Query: 538 EDANFSNNAMAEAFKAAK 555 ++ + E + Sbjct: 588 ASSSPGAATIGELLSWKR 605 >UniRef50_Q1MQB8 Ribosomal protein S1 n=2 Tax=Desulfovibrionaceae RepID=Q1MQB8_LAWIP Length = 574 Score = 562 bits (1448), Expect = e-158, Method: Composition-based stats. Identities = 250/556 (44%), Positives = 363/556 (65%), Gaps = 4/556 (0%) Query: 4 SFAQLFEESLKE--IETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE 61 +F E+ L + G+IV+G +V ID D VLVD KSE IP +F+N G + Sbjct: 17 NFESALEDYLSTDFGDLEEGTIVKGEIVRIDDDNVLVDVNFKSEGQIPTIEFQNTDGNIT 76 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 +VGD++DV + + G +LS EKAKR + + LE E + G I ++KGG+T Sbjct: 77 AKVGDKIDVFVVRKNEQEGTIILSFEKAKRMQLFDQLEDLQEKNGIIKGRIVRRIKGGYT 136 Query: 122 VELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 ++L G+ AFLPGS VD+RPV D L +E EF+V+K++++R+NV+VSRR ++E E ++ Sbjct: 137 IDLRGVEAFLPGSHVDLRPVPDMDMLVNQEYEFRVLKINRRRSNVIVSRRVLLEEERDSK 196 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEI 241 R LL+ + EG V G VKN+T+YG FVDLGG+DGLLHITDM+WKR++HP E+VN+G E+ Sbjct: 197 RQDLLQTISEGQVVVGKVKNVTEYGVFVDLGGLDGLLHITDMSWKRIRHPREMVNLGQEL 256 Query: 242 TVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVE 301 +KVL FD+E +VSLGLKQL DPW I +R+PE + G+VTNL DYG FVE+E GVE Sbjct: 257 ELKVLSFDKENQKVSLGLKQLVPDPWQDITERFPETSHHVGKVTNLVDYGVFVELESGVE 316 Query: 302 GLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETH 361 GLVH+SEM WT K HPS++V+ GD VEV++L ID++++RISLG+KQ K NPW+ E + Sbjct: 317 GLVHISEMSWTRKLRHPSQMVHQGDEVEVVILGIDQDKKRISLGMKQVKPNPWELVGEKY 376 Query: 362 NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQ 421 +G +EG +K+IT+FG+FIG++ GIDGL+H+SDISW +K GD + A VL Sbjct: 377 PEGTILEGVVKNITEFGMFIGIEDGIDGLIHVSDISWTKKVRHPNELFKVGDTVQAKVLT 436 Query: 422 VDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRAS 481 VD E E+ +LG+KQL EDP++N ++ G IV G +T + G VE+ +G+EG + S Sbjct: 437 VDQENEKFTLGIKQLTEDPWSNAPSVYPVGGIVKGIITNITDFGLFVEVEEGIEGLVHVS 496 Query: 482 EASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDAN 541 E S +++ + + G+E++AK V + R + LS++ E +E ++ Sbjct: 497 ELSSKKIKSPSEIYKDGEEIQAKIIHVSAEERRLGLSIKQLKEDEEHRKSREYSRT--GP 554 Query: 542 FSNNAMAEAFKAAKGE 557 S ++ + K E Sbjct: 555 DSGQSLGDLLKMKLEE 570 >UniRef50_C1FAB9 Ribosomal protein S1 n=2 Tax=Bacteria RepID=C1FAB9_ACIC5 Length = 637 Score = 559 bits (1442), Expect = e-158, Method: Composition-based stats. Identities = 247/546 (45%), Positives = 352/546 (64%), Gaps = 5/546 (0%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEI 62 ESF + +V G V+ + V+VD GLKSE IP +Q + + ++ Sbjct: 88 ESFDREQAAEAAASSFDDTQVVNGTVIKLTDKHVVVDVGLKSEGLIPLDQVLDHNQQPKV 147 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 Q GD V+V ++ E+ G LLS EKA R W T+EKA + VTG++ G+VKGG TV Sbjct: 148 QPGDTVEVVIER-EEAEGGFLLSYEKALRLRVWDTIEKAANEKTPVTGIVAGRVKGGLTV 206 Query: 123 ELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 ++ GI+AFLPGS +++RPVR+ G+ +E +VIKL++KR NVVVSR+ ++E E +A+R Sbjct: 207 DI-GIKAFLPGSQLEIRPVRNLDAYIGQPIEVRVIKLNKKRGNVVVSRKEILEEEQTAKR 265 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 + LE+L+EG + G VKNLTDYGAFVD+GG+DGLLHITDM+W R+ HP ++VNVGDEI Sbjct: 266 SETLEHLEEGSILTGTVKNLTDYGAFVDMGGIDGLLHITDMSWGRLTHPRDLVNVGDEIQ 325 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 VKVLKFDR++ RVSLG KQL DPW+ +RYP G ++ GRV ++TDYG FVE+E+G+EG Sbjct: 326 VKVLKFDRDKQRVSLGFKQLTPDPWLDATERYPVGARVRGRVLSVTDYGSFVELEQGIEG 385 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHN 362 LVHVSEM W+ + HPSK++ GD VE +VL ++ RRISLG+KQ + NPW+ + + Sbjct: 386 LVHVSEMTWSKRMKHPSKMLKPGDEVETVVLSVNPTDRRISLGMKQLQDNPWETLGDKYP 445 Query: 363 KGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQV 422 G VEG+++++TDFG FI ++ GIDGLVH+S++SW + KKG+++ AVVL V Sbjct: 446 TGATVEGRVRNLTDFGAFIEIEDGIDGLVHVSNLSWTKRVKHPSEVLKKGEKVRAVVLGV 505 Query: 423 DAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASE 482 + E R+SLG+KQL D + + ++ G +V GKV GA +E+A+GVEG SE Sbjct: 506 EPENRRLSLGIKQLQPDVWETFFEQHRTGDVVHGKVLRTAQFGAFIEIAEGVEGLCHVSE 565 Query: 483 ASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAK-DEADEKDAIATVNKQEDAN 541 A+ L G E + K ++ + + LS+RA +EA D A + Sbjct: 566 ATDQHGAPVN--LEQGQEYDFKIIKMNPDEKKVGLSLRAVGEEASRADVEAYKAPVSSST 623 Query: 542 FSNNAM 547 + + Sbjct: 624 TTLGDL 629 >UniRef50_A8ZTA2 Ribosomal protein S1 n=22 Tax=Deltaproteobacteria RepID=A8ZTA2_DESOH Length = 604 Score = 556 bits (1433), Expect = e-157, Method: Composition-based stats. Identities = 248/547 (45%), Positives = 369/547 (67%), Gaps = 5/547 (0%) Query: 6 AQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVG 65 +++ + K+ G +V G V+A+DKD VLVD G KSE I +FKN +GE+ +++ Sbjct: 27 MAMYDHTFKQFT--EGEVVVGKVIAVDKDYVLVDIGYKSEGQININEFKNEKGEVNVKIY 84 Query: 66 DEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN 125 D+V+V ++ ++ + +LS++KA++ + W T++ +++ V+GVI +VKGGF+V++ Sbjct: 85 DDVEVMIEFWDEEHEKLVLSKDKAEKDKIWETIKDTFDNDGVVSGVIINRVKGGFSVDV- 143 Query: 126 GIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQL 185 G++AFLPGS D+RP+R+ + G+ +FKV+K +++RNN+V+SRR ++E + +R +L Sbjct: 144 GLQAFLPGSQADLRPIRNFDEMVGQTYDFKVLKYNRRRNNIVLSRRVLLEETLATKRAEL 203 Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKV 245 +E L +G V+GIVKN+T+YG FVDLGG+DGLLHITD++W RV+HPSE+ VGD +T+KV Sbjct: 204 METLADGQVVEGIVKNITEYGVFVDLGGIDGLLHITDISWGRVRHPSELFTVGDNVTLKV 263 Query: 246 LKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVH 305 L FD ++ ++SLG+KQL DPW + A++YP G K TG+V ++T+YG FVE+EEGVEGL+H Sbjct: 264 LSFDLDKKKISLGMKQLTPDPWESAAEKYPVGVKTTGKVVSITNYGIFVELEEGVEGLIH 323 Query: 306 VSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGD 365 VSE+ WT K HPSKVVN+G+ V+ +VLDI RRISLG+KQ + NPW+ +E + G Sbjct: 324 VSEISWTRKIRHPSKVVNIGEEVDAVVLDIQPGNRRISLGMKQVEPNPWEVISEKYPVGT 383 Query: 366 RVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAE 425 +EG+IK+ITDFG+FIG+D IDGLVH+SDISW + YKKGD + AVVL++D Sbjct: 384 VIEGRIKNITDFGLFIGIDDDIDGLVHISDISWTKRIKHPSEIYKKGDLVRAVVLEIDKA 443 Query: 426 RERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASR 485 ER S+G+KQL DP+ + G V+G VT V G VEL +G+EG + SE S Sbjct: 444 NERFSMGIKQLESDPWESVRDRYPIGTKVSGVVTNVTDFGIFVELEEGIEGLVHVSEVST 503 Query: 486 DRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNN 545 +R++ VG E+ A+ V+ R I LS++ D D+K + S Sbjct: 504 ERIKTPVGQYEVGAELTARVMNVNADERKIGLSIKRLDVEDDKTLLKDYVDNSRGTTS-- 561 Query: 546 AMAEAFK 552 A E + Sbjct: 562 AFGELLR 568 >UniRef50_Q6NDP1 30S ribosomal protein S1 n=165 Tax=Proteobacteria RepID=RS1_RHOPA Length = 565 Score = 551 bits (1420), Expect = e-155, Method: Composition-based stats. Identities = 265/552 (48%), Positives = 382/552 (69%), Gaps = 2/552 (0%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEI 62 + FA + +ES + S+++G VVAI+KD+ ++D GLK+E +P +F + EI Sbjct: 12 DDFAAMLDESFAGGNLQESSVIKGKVVAIEKDMAVIDVGLKTEGRVPLREFAGPGRDNEI 71 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 +VGD V+V LD +E+ GE +LSR+KA+R E+W LEKA+++ E V GVI +VKGGFTV Sbjct: 72 KVGDTVEVFLDRIENALGEAVLSRDKARREESWGKLEKAFQNNEKVFGVIFNQVKGGFTV 131 Query: 123 ELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 +L+G AFLP S VD+RP+RD L F+++K+D++R N+VVSRR V+E + +R Sbjct: 132 DLDGAVAFLPRSQVDIRPIRDVAPLMNNSQPFQILKMDRRRGNIVVSRRTVLEETRAEQR 191 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 +L++NL+EG + G+VKN+TDYGAFVDLGG+DGLLH+TD+AW+RV HP+E++ +G + Sbjct: 192 QELVQNLEEGQVIDGVVKNITDYGAFVDLGGIDGLLHVTDIAWRRVNHPTEVLTIGQTVK 251 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 VK++K + E R+SLG+KQL +DPW I +YP + TGRVTN+TDYG FVE+E G+EG Sbjct: 252 VKIIKINHETHRISLGMKQLLDDPWQGIEAKYPLNARFTGRVTNITDYGAFVELEPGIEG 311 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHN 362 L+HVSEM WT KN+HP K+V+ VEV VL++D +RRISLGLKQ NPW+ F E H Sbjct: 312 LIHVSEMSWTKKNMHPGKIVSTSQEVEVQVLEVDSVKRRISLGLKQTMRNPWEVFVEKHP 371 Query: 363 KGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQV 422 G VEG++K+ T+FG+F+GLDG +DG+VHLSD+ W + GE+ + +KKGD + AVVL V Sbjct: 372 VGSTVEGEVKNKTEFGLFLGLDGDVDGMVHLSDLDWKLPGEQVIDNFKKGDMVKAVVLDV 431 Query: 423 DAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELAD-GVEGYLRAS 481 D E+ERISLGVKQL DPF KKGA+VT +V V G V++ +++ S Sbjct: 432 DVEKERISLGVKQLEGDPFAE-PGDVKKGAVVTCEVLDVKESGIDVQIVGTDFNTFIKRS 490 Query: 482 EASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDAN 541 E +RDR + + +VG++V+A+ D+K R + +S++A + A+EK+AIA + Sbjct: 491 ELARDRNDQRSDRFAVGEKVDARVIQFDKKARKVQVSIKALEVAEEKEAIAQYGSSDSGA 550 Query: 542 FSNNAMAEAFKA 553 + + A K Sbjct: 551 TLGDILGTALKQ 562 >UniRef50_B6AR90 Ribosomal protein S1 n=1 Tax=Leptospirillum sp. Group II '5-way CG' RepID=B6AR90_9BACT Length = 591 Score = 547 bits (1410), Expect = e-154, Method: Composition-based stats. Identities = 245/555 (44%), Positives = 359/555 (64%), Gaps = 8/555 (1%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE 61 E +L+ ++L+ ++ GS+V G V+ I + V+VD G KSE I +F + + Sbjct: 30 AEEMDRLYADTLRNLD--EGSVVEGRVIEIYPNEVVVDIGYKSEGHISKSEFSEEEIQ-A 86 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 ++V D + V L+ ED G +LS+EKA R + W +E+ + ++ + G I ++KGG T Sbjct: 87 LKVDDIIHVYLEEREDVNGNLVLSKEKADRMKVWDAIEEQFNRSDVIEGRIISRIKGGMT 146 Query: 122 VELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 V++ G++AFLPGS +D+RPVRD L G+ ++ ++IK+++KR N++VSRR ++E Sbjct: 147 VDV-GLKAFLPGSQIDLRPVRDMDRLIGQTIQVRIIKMNKKRGNIIVSRRVLLEEWRDRR 205 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEI 241 + ++ L+EG ++GIVKN+TDYGAF+DLGG+DGLLHITDM+W RV +P E +NVGD++ Sbjct: 206 KKVTMDALKEGEILEGIVKNITDYGAFIDLGGIDGLLHITDMSWGRVTNPQEFMNVGDKV 265 Query: 242 TVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVE 301 V VLK D+E RVSLGLKQL DPW + RYPEGT++ RV ++TDYG F+EIE G+E Sbjct: 266 NVVVLKHDKETGRVSLGLKQLTPDPWTTVGTRYPEGTRVNARVVSITDYGAFLEIEPGIE 325 Query: 302 GLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETH 361 GL+HV+EM W ++ HPSK+++VGD +EV VL IDE+ R+ISLGLKQ NPW + Sbjct: 326 GLMHVTEMSWNHEVKHPSKIMSVGDTIEVQVLKIDEKNRKISLGLKQLGPNPWDDVETKY 385 Query: 362 NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQ 421 G V GKIKS+TDFG F+GLD GIDGL+H+SD+SW +KKG ++ VVL+ Sbjct: 386 PVGAVVSGKIKSLTDFGAFVGLDEGIDGLIHISDMSWTKHVRHPSEVFKKGQKVEVVVLK 445 Query: 422 VDAERERISLGVKQLAEDPFN-NWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRA 480 ++ ER+R+SLG KQ++EDP++ + + G+ + G VT V G VELA+G+EG + Sbjct: 446 IEKERQRLSLGFKQVSEDPWDSDIPSRFPVGSFLDGVVTKVMDFGFFVELAEGIEGLVHV 505 Query: 481 SEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDA 540 SE + + V G + + +D R I LS++A +A VN Q Sbjct: 506 SEVDLESGQRLDQVYQPGMSLPVRVIKLDPAERKIGLSMKAVSADSPLEAAPAVNAQPA- 564 Query: 541 NFSNNAMAEAFKAAK 555 NAM EA K+A+ Sbjct: 565 --PGNAMEEALKSAR 577 >UniRef50_D1N749 Ribosomal protein S1 n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N749_9BACT Length = 607 Score = 540 bits (1392), Expect = e-152, Method: Composition-based stats. Identities = 238/552 (43%), Positives = 340/552 (61%), Gaps = 7/552 (1%) Query: 4 SFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQ 63 S +L + S G IV G +VA D LVD G K+E +PA +F E Sbjct: 48 SMDELLQSSESTNAFTKGKIVEGKIVAKRPDGALVDIGYKAEGFVPASEFLKFD---EAN 104 Query: 64 VGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVE 123 +GD++DV L+ +E+ +S EKA +AW + Y + V G + +VKGG V+ Sbjct: 105 IGDKIDVYLEEIENRNNMPEISLEKAYSIKAWNRITTEYGEGHVVKGFMRHRVKGGIMVD 164 Query: 124 LNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERD 183 + G AFLPGS +DV PV + GKE + K+IK++ R N+VVSRR ++E +R Sbjct: 165 VEGFPAFLPGSQLDVGPVHNMDDYIGKEFDVKIIKINLDRRNIVVSRRELLEETLKDQRS 224 Query: 184 QLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITV 243 +LL ++ KG+VKN+TD+GAF+DLGGVDGLLHITD++W R+ HPSE++ VG+EI V Sbjct: 225 KLLGEMKVDELRKGVVKNITDFGAFIDLGGVDGLLHITDISWGRISHPSEVLKVGEEIEV 284 Query: 244 KVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGL 303 ++ D+E+ RVSLGLKQ +PW + +YP+G+K+ G+V N+ YG FVEIE GVEGL Sbjct: 285 VIIGIDKEKERVSLGLKQKTRNPWDDVVSKYPKGSKINGKVVNIMPYGAFVEIETGVEGL 344 Query: 304 VHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNK 363 +HVSEM WT + S V+++G+ VE +VLDID + R+ISLGL+Q + NPW+ AE + Sbjct: 345 IHVSEMSWTKRVSKASDVLSIGEEVEAVVLDIDRDSRKISLGLRQKERNPWEVLAEKYPV 404 Query: 364 GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVD 423 G R+ GK++++T +G F+ ++ IDG++H+SD+SW K G E+ A++L ++ Sbjct: 405 GRRITGKVRNMTSYGAFVEIENDIDGMIHVSDMSWTRKINNPNEVLKPGQEVEAIILDIN 464 Query: 424 AERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEA 483 E++RISLG+KQ DP+ N L K G +V GKVT + A GA VEL + ++G + S+ Sbjct: 465 PEQQRISLGLKQAETDPWANINDLYKVGDVVKGKVTKIAAFGAFVELTNKIDGLIHISQL 524 Query: 484 SRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDE----ADEKDAIATVNKQED 539 SRDRVE VL+VGDEVEA+ VD R I LS++A E D K A Sbjct: 525 SRDRVEKVKDVLNVGDEVEARVIKVDTDERRIGLSIKAVGENFSPEDLKAAEEEYTAALK 584 Query: 540 ANFSNNAMAEAF 551 + M E F Sbjct: 585 PGEAMVDMGEVF 596 >UniRef50_B3QSU3 Ribosomal protein S1 n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QSU3_CHLT3 Length = 616 Score = 531 bits (1368), Expect = e-149, Method: Composition-based stats. Identities = 223/535 (41%), Positives = 336/535 (62%), Gaps = 5/535 (0%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEI 62 + L+ +L E+ IV+G VV+I + V +D GLKSE + +F+N + E+ Sbjct: 36 KEMEALYSSTLNELNEE--EIVKGRVVSISEKDVTIDVGLKSEGIVQLIEFQNPE---EL 90 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 + GD+V+V L+++ED G+ +LS+ KA W + + E ++G I +VKGG TV Sbjct: 91 KEGDDVEVFLESIEDKMGQLILSKRKADVMRIWEKIYDSLEKGTIISGKIIARVKGGMTV 150 Query: 123 ELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 L+G+ AFLPGS +DV+PVRD L G+ ++F+V+K++ N+VVS + ++E E A R Sbjct: 151 SLSGVEAFLPGSQIDVKPVRDFDALVGQTMDFRVVKINPLTQNIVVSHKVILEEEYEARR 210 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 ++L N++ GM ++G VKN+TD+G FVDLGG+DGL+HITD+ W R+ HPSE VN+ D I Sbjct: 211 KEMLANIKVGMVLEGTVKNITDFGIFVDLGGLDGLVHITDITWGRISHPSEAVNLDDPIK 270 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 V V+ +D ++ RVSLG+KQL PW I ++YP GT++TG+V ++TDYG FVEIE+G+EG Sbjct: 271 VVVIGYDADKQRVSLGMKQLTPHPWENIEEKYPAGTRVTGKVVSITDYGAFVEIEKGIEG 330 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHN 362 LVH+SEM WT HP++ V +G VE ++L+ID+E ++SL +KQ + +PW AE + Sbjct: 331 LVHISEMSWTQHIKHPNQFVTMGQEVECVILNIDKEHTKLSLSMKQTEEDPWIVLAEKYP 390 Query: 363 KGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQV 422 +G +++ITDFG+F+ L+ G+DGLVH+SD+SW KK E+ VL+ Sbjct: 391 VDSEHKGIVRNITDFGVFVELESGVDGLVHISDLSWTKKIRHPSEIVKKNQELDVKVLKF 450 Query: 423 DAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASE 482 D + RI+LG KQ+ DP++++ G GK+ + KG VEL GV+G++ AS Sbjct: 451 DVKARRIALGHKQIEPDPWSDFENDYAVGTETKGKIAQIIEKGVIVELPSGVDGFVPASH 510 Query: 483 ASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQ 537 + V D VGDE+ K DR+N+ I LS + K+ I KQ Sbjct: 511 LLQGGVRDINASFKVGDELPLKVIEFDRENKRIILSALEYFKGKSKEEIEEYMKQ 565 Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats. Identities = 99/363 (27%), Positives = 175/363 (48%), Gaps = 19/363 (5%) Query: 172 AVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKH 230 E A L L E VKG V ++++ +D+G +G++ + + ++ Sbjct: 32 EAELKEMEALYSSTLNELNEEEIVKGRVVSISEKDVTIDVGLKSEGIVQLIE-----FQN 86 Query: 231 PSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGE-DPWVAIAKRYPEGTKLTGRVTNLTD 289 P E + GD++ V + + + ++ L ++ W I +GT ++G++ Sbjct: 87 PEE-LKEGDDVEVFLESIEDKMGQLILSKRKADVMRIWEKIYDSLEKGTIISGKIIARVK 145 Query: 290 YGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC 349 G V + GVE + S++D K + + VG ++ V+ I+ + I + K Sbjct: 146 GGMTVSLS-GVEAFLPGSQID--VKPVRDFDAL-VGQTMDFRVVKINPLTQNIVVSHKVI 201 Query: 350 KANPWQ----QFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEA 405 ++ + G +EG +K+ITDFGIF+ L GG+DGLVH++DI+W Sbjct: 202 LEEEYEARRKEMLANIKVGMVLEGTVKNITDFGIFVDL-GGLDGLVHITDITWGRIS-HP 259 Query: 406 VREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKG 465 D I VV+ DA+++R+SLG+KQL P+ N G VTGKV ++ G Sbjct: 260 SEAVNLDDPIKVVVIGYDADKQRVSLGMKQLTPHPWENIEEKYPAGTRVTGKVVSITDYG 319 Query: 466 ATVELADGVEGYLRASEAS-RDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDE 524 A VE+ G+EG + SE S ++ +++G EVE +D+++ +SLS++ +E Sbjct: 320 AFVEIEKGIEGLVHISEMSWTQHIKHPNQFVTMGQEVECVILNIDKEHTKLSLSMKQTEE 379 Query: 525 ADE 527 Sbjct: 380 DPW 382 Score = 48.0 bits (113), Expect = 8e-04, Method: Composition-based stats. Identities = 17/108 (15%), Positives = 39/108 (36%), Gaps = 3/108 (2%) Query: 12 SLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA---QGELEIQVGDEV 68 S E + G+ +G + I + V+V+ + +PA +VGDE+ Sbjct: 470 SDFENDYAVGTETKGKIAQIIEKGVIVELPSGVDGFVPASHLLQGGVRDINASFKVGDEL 529 Query: 69 DVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKV 116 + + + +LS + + ++ +E+ + I Sbjct: 530 PLKVIEFDRENKRIILSALEYFKGKSKEEIEEYMKQHPKEKQEIQEAT 577 >UniRef50_C9RMY1 Ribosomal protein S1 n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RMY1_FIBSS Length = 590 Score = 530 bits (1366), Expect = e-149, Method: Composition-based stats. Identities = 227/533 (42%), Positives = 334/533 (62%), Gaps = 3/533 (0%) Query: 18 TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVED 77 G +V G + ++ VLVD KSE I +FK+ +++G E++V ++ +ED Sbjct: 41 LEQGKLVTGKISQVNDQEVLVDVNYKSEGVIDRAEFKDTD---SLELGSEIEVFVEKLED 97 Query: 78 GFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVD 137 G +LS++KA W + A+E+ E V G + ++KGG V+L GI AFLPGS +D Sbjct: 98 EDGRLILSKQKADFVRVWDRIHAAFENNEVVRGTLTKRIKGGVVVDLFGIDAFLPGSQID 157 Query: 138 VRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKG 197 +R + D L G+E + KVIK+++ R N+VVSRR V+E E + +R +LE L++ KG Sbjct: 158 LRQIPDINALIGQEFDLKVIKVNKARRNIVVSRRVVLEEERNKQRGDVLETLEKNQVRKG 217 Query: 198 IVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSL 257 IVKN+TD+GAF+DLGGVDGLLHITDM++KR+ HPSE++ +G E+ V VL F+ ++ R+SL Sbjct: 218 IVKNITDFGAFIDLGGVDGLLHITDMSYKRINHPSEMLQLGQEVEVMVLDFNDKKERISL 277 Query: 258 GLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIH 317 G+KQL PW IA+RYPEG + G+V ++TDYG FVE++ GVEGL+HVSEM WT H Sbjct: 278 GMKQLKPHPWKDIAERYPEGAIVKGKVVSITDYGAFVELDSGVEGLIHVSEMSWTQHVKH 337 Query: 318 PSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDF 377 PSK++ VG VE +VL ++E+ RISLG+KQ +++PW G RV G+I++I F Sbjct: 338 PSKILTVGQEVEAVVLKVEEDAERISLGMKQLESDPWDSIETELPPGARVVGEIRNIASF 397 Query: 378 GIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLA 437 G F+ + G+DGL+H+SD+SW KKGD++ VVL VD E+ RISL +K L Sbjct: 398 GAFVEIKEGVDGLIHVSDMSWTKKITHPNEMVKKGDKVECVVLAVDKEKRRISLSMKHLT 457 Query: 438 EDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSV 497 EDP+++ + + V GK+ + +G VELADG+EG++ S+ + + ++ V Sbjct: 458 EDPWDSIDSTYPVDSEVKGKIVRMLDRGVVVELADGIEGFIPVSKLTAEYIKVPADAFKV 517 Query: 498 GDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEA 550 GDEV A T +D+ NR I LSV + E + + + EA Sbjct: 518 GDEVPAVVTEIDQNNRKIYLSVVDYFKNRESAELKAWMDSHKPGENGTTIGEA 570 Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats. Identities = 137/451 (30%), Positives = 239/451 (52%), Gaps = 25/451 (5%) Query: 99 EKAYEDAETVTGVINGKVKGGFTVELN----GIRAFLPGSLVDVRPVRDTLHL-EGKELE 153 E + VTG I+ V++N G+ +D +DT L G E+E Sbjct: 38 MGCLEQGKLVTGKISQVNDQEVLVDVNYKSEGV--------IDRAEFKDTDSLELGSEIE 89 Query: 154 FKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG 213 V KL+ + +++S++ EN V+G + G VDL G Sbjct: 90 VFVEKLEDEDGRLILSKQKADFVRVWDRIHAAFEN---NEVVRGTLTKRIKGGVVVDLFG 146 Query: 214 VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVA---- 269 +D L + + +++ + + +G E +KV+K ++ R + + + + E+ Sbjct: 147 IDAFLPGSQIDLRQIPDINAL--IGQEFDLKVIKVNKARRNIVVSRRVVLEEERNKQRGD 204 Query: 270 IAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVE 329 + + + G V N+TD+G F+++ GV+GL+H+++M + N HPS+++ +G VE Sbjct: 205 VLETLEKNQVRKGIVKNITDFGAFIDLG-GVDGLLHITDMSYKRIN-HPSEMLQLGQEVE 262 Query: 330 VMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDG 389 VMVLD ++++ RISLG+KQ K +PW+ AE + +G V+GK+ SITD+G F+ LD G++G Sbjct: 263 VMVLDFNDKKERISLGMKQLKPHPWKDIAERYPEGAIVKGKVVSITDYGAFVELDSGVEG 322 Query: 390 LVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNK 449 L+H+S++SW + + G E+ AVVL+V+ + ERISLG+KQL DP+++ Sbjct: 323 LIHVSEMSWTQHVKHPSKILTVGQEVEAVVLKVEEDAERISLGMKQLESDPWDSIETELP 382 Query: 450 KGAIVTGKVTAVDAKGATVELADGVEGYLRASEAS-RDRVEDATLVLSVGDEVEAKFTGV 508 GA V G++ + + GA VE+ +GV+G + S+ S ++ ++ GD+VE V Sbjct: 383 PGARVVGEIRNIASFGAFVEIKEGVDGLIHVSDMSWTKKITHPNEMVKKGDKVECVVLAV 442 Query: 509 DRKNRAISLSVRAKDEADEKDAIATVNKQED 539 D++ R ISLS++ E +T + Sbjct: 443 DKEKRRISLSMKHLTEDPWDSIDSTYPVDSE 473 Score = 90.4 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 41/186 (22%), Positives = 73/186 (39%), Gaps = 8/186 (4%) Query: 15 EIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQF----KNAQGELEIQVGDEVDV 70 E E PG+ V G + I V+ + I K ++ GD+V+ Sbjct: 378 ETELPPGARVVGEIRNIASFGAFVEIKEGVDGLIHVSDMSWTKKITHPNEMVKKGDKVEC 437 Query: 71 ALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL-NGIRA 129 + AV+ LS + + W +++ Y V G I + G VEL +GI Sbjct: 438 VVLAVDKEKRRISLSMKHLT-EDPWDSIDSTYPVDSEVKGKIVRMLDRGVVVELADGIEG 496 Query: 130 FLPGSLVDVRPVRDTLH--LEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLE 187 F+P S + ++ G E+ V ++DQ + +S ++ SAE ++ Sbjct: 497 FIPVSKLTAEYIKVPADAFKVGDEVPAVVTEIDQNNRKIYLSVVDYFKNRESAELKAWMD 556 Query: 188 NLQEGM 193 + + G Sbjct: 557 SHKPGE 562 >UniRef50_B3E440 Ribosomal protein S1 n=3 Tax=Deltaproteobacteria RepID=B3E440_GEOLS Length = 573 Score = 529 bits (1362), Expect = e-148, Method: Composition-based stats. Identities = 255/553 (46%), Positives = 355/553 (64%), Gaps = 6/553 (1%) Query: 2 TESFAQLFEESLKEIE-TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL 60 + FA+LF SLKE E I+ G VV +D D VLVD G KSE +P +F++A+G + Sbjct: 20 SNEFAELFSASLKEQERPERDKILEGTVVRVDPDTVLVDVGRKSEGFVPISEFRDAEGNV 79 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 + VGD+V V V G S+++A + AW T+ +A + + G I K GGF Sbjct: 80 SVSVGDKVKV----VSSRDGGNKFSKKRADQMAAWETIHEAGGEGAVLEGTIIAKTNGGF 135 Query: 121 TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 TV + GI AFLP S VD RP + G +FKVI L+QKR N+V+SRRA++E E + Sbjct: 136 TVAIGGINAFLPASQVDTRPSGNGDAYIGVAGQFKVISLNQKRGNIVLSRRALLEEERAE 195 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 R LE L EG ++G+VKNLT+YGAFVDLGGVDGLLH+TD++W RV P++++ G E Sbjct: 196 SRKATLEKLSEGQIMQGVVKNLTEYGAFVDLGGVDGLLHVTDISWGRVGKPADVLKPGQE 255 Query: 241 ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV 300 + VK+LKFDRE+ +VS+G+KQ DPW IA R+PEGT+++G+V +L DYG F+E+E G+ Sbjct: 256 VNVKILKFDREKGKVSVGIKQTLPDPWQDIANRFPEGTRVSGKVVSLMDYGAFIELESGI 315 Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAET 360 EGLVHVSEM WT + + ++NVGD V+V+VL +D + R+ISLGLKQ NPWQ AE Sbjct: 316 EGLVHVSEMSWTKRVRKAADMLNVGDQVDVVVLGVDLQNRKISLGLKQVNDNPWQSIAER 375 Query: 361 HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL 420 + G ++EG+IK++TDFG+FIG++ GIDGLVH+SDISW + Y KGD + AVVL Sbjct: 376 YPVGTKLEGQIKNMTDFGMFIGIEEGIDGLVHVSDISWTKRVKHPGDVYSKGDLVQAVVL 435 Query: 421 QVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRA 480 +VD + ER+SLG+KQL DP++ G + GKV + G VE+ +G+EG + Sbjct: 436 KVDPQNERVSLGIKQLTPDPWSLVPQKYAPGTRLVGKVASTTDFGVFVEIEEGIEGLIHV 495 Query: 481 SEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDA 540 SE SR++V A VGD +EA D + R ISLSV++ A EK + Sbjct: 496 SELSREKVPSAKDFAIVGDSIEAVVLNADSRERRISLSVKSLAAAAEKAEFESYLGGGQG 555 Query: 541 NFSNNAMAEAFKA 553 ++N + + K+ Sbjct: 556 EATSN-LGDLLKS 567 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 102/388 (26%), Positives = 184/388 (47%), Gaps = 20/388 (5%) Query: 153 EFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG 212 E K + +D +V E +++ ++Q E + ++G V + VD+G Sbjct: 3 EVKRLNVDTDDMDVEHQSNEFAELFSASLKEQ--ERPERDKILEGTVVRVDPDTVLVDVG 60 Query: 213 GV-DGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIA 271 +G + I++ R + V+VGD++ V R+ + W I Sbjct: 61 RKSEGFVPISEF---RDAEGNVSVSVGDKVKVVS---SRDGGNKFSKKRADQMAAWETIH 114 Query: 272 KRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVM 331 + EG L G + T+ G V I G+ + S++D + + G Sbjct: 115 EAGGEGAVLEGTIIAKTNGGFTVAIG-GINAFLPASQVDTRPSGNGDAYIGVAGQ---FK 170 Query: 332 VLDIDEERRRISLGLKQC----KANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGI 387 V+ ++++R I L + +A + E ++G ++G +K++T++G F+ L GG+ Sbjct: 171 VISLNQKRGNIVLSRRALLEEERAESRKATLEKLSEGQIMQGVVKNLTEYGAFVDL-GGV 229 Query: 388 DGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVAL 447 DGL+H++DISW G+ K G E+ +L+ D E+ ++S+G+KQ DP+ + Sbjct: 230 DGLLHVTDISWGRVGK-PADVLKPGQEVNVKILKFDREKGKVSVGIKQTLPDPWQDIANR 288 Query: 448 NKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEAS-RDRVEDATLVLSVGDEVEAKFT 506 +G V+GKV ++ GA +EL G+EG + SE S RV A +L+VGD+V+ Sbjct: 289 FPEGTRVSGKVVSLMDYGAFIELESGIEGLVHVSEMSWTKRVRKAADMLNVGDQVDVVVL 348 Query: 507 GVDRKNRAISLSVRAKDEADEKDAIATV 534 GVD +NR ISL ++ ++ + Sbjct: 349 GVDLQNRKISLGLKQVNDNPWQSIAERY 376 >UniRef50_D2R4L6 Ribosomal protein S1 n=7 Tax=Planctomycetales RepID=D2R4L6_9PLAN Length = 600 Score = 525 bits (1352), Expect = e-147, Method: Composition-based stats. Identities = 216/515 (41%), Positives = 329/515 (63%), Gaps = 9/515 (1%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVE 76 E IV G V+ + +VLVD G KSE +IP +++ +GE QVG V V ++ +E Sbjct: 40 EFDVNKIVEGRVLRVADGMVLVDIGFKSEGSIPLDEW--EEGEEPPQVGQLVRVLIEDLE 97 Query: 77 DG------FGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAF 130 D G +S+ KAK+ +AW + ++ + VTG ++ K+KGG V++ G+ F Sbjct: 98 DETAAPEDGGMVRISKRKAKKLDAWKEMMDRIKEGQVVTGTVSRKIKGGLLVDIEGVNVF 157 Query: 131 LPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQ 190 LP S VD+R D G+ ++ +V+K+D+ R N+VVSRR++IE + +R+ LL+ L+ Sbjct: 158 LPASQVDIRRPADIGDYIGRTVQCEVLKIDEARRNIVVSRRSLIERQREEDREALLKELE 217 Query: 191 EGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDR 250 G KG+VKN+ ++GAFVDLGG+DGLLHITDM+W+R+ HPSE+V + EI V VL DR Sbjct: 218 IGQVRKGVVKNIAEFGAFVDLGGIDGLLHITDMSWERIGHPSEMVAIDQEIEVMVLHIDR 277 Query: 251 ERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMD 310 E+ +++LGLKQ +PW + +YP GT + G V N+ YG FV++E G+EGLVH+SEM Sbjct: 278 EKKKIALGLKQKEGNPWADVDTKYPVGTVVKGSVVNVMSYGAFVKLEPGIEGLVHISEMS 337 Query: 311 WTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGK 370 WT + HPS++VN+GD + V++L +D++ +++SLG+KQ + NPW + AE + VEGK Sbjct: 338 WTRRVNHPSELVNIGDEISVVILGVDKDGQQLSLGMKQTQENPWTRVAEKYPVDTIVEGK 397 Query: 371 IKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERIS 430 ++++T++G F+ L+ GIDGL+H+SD+SW +KG + +L VD ER RI+ Sbjct: 398 VRNLTNYGAFVELEEGIDGLLHVSDMSWTRKISHPSEMLEKGQPVRCKILSVDQERRRIA 457 Query: 431 LGVKQLAEDPF-NNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVE 489 LG+KQL EDP+ + + G +V+G VT + G V L DG+EG L SE + +VE Sbjct: 458 LGLKQLDEDPWARDIPGKYQPGQVVSGAVTKITNFGVFVGLEDGLEGLLHISELADHKVE 517 Query: 490 DATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDE 524 + V+ VGD+++ K VD R I LS + + Sbjct: 518 NPEDVVKVGDKIDVKILRVDIDERKIGLSRKRVEW 552 >UniRef50_Q2S1M7 Ribosomal protein S1, putative n=2 Tax=Rhodothermaceae RepID=Q2S1M7_SALRD Length = 871 Score = 520 bits (1340), Expect = e-146, Method: Composition-based stats. Identities = 218/511 (42%), Positives = 329/511 (64%), Gaps = 6/511 (1%) Query: 13 LKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVAL 72 I+ R IV G V+ +++D V++D G KS+ + ++F GE EI GD V+V L Sbjct: 188 ETSIDVREQDIVEGRVLRVNEDYVVIDIGYKSDGIVSRDEF----GEEEIHPGDTVEVYL 243 Query: 73 DAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVE-LNGIRAFL 131 + ED G+ +LS+E+A + W +E+ YE+ E + G I ++KGG VE +G+ AFL Sbjct: 244 ERKEDRDGQLVLSKEQADKVRRWQRVEEIYENEEVIEGTIIRRIKGGMIVELFDGMEAFL 303 Query: 132 PGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQE 191 PGS +DVRPVRD +EFK++KL+ + N+VVS R +IE E +R ++LE L+ Sbjct: 304 PGSQIDVRPVRDFESYLETRMEFKIVKLNPENENIVVSHRELIEHELEEQRQEILEQLEV 363 Query: 192 GMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRE 251 G ++G VKN+ D+G F+DLGGVDGLLHITD++W RV HPSE+V + E+ V VL ++ E Sbjct: 364 GQVLEGTVKNIVDFGVFIDLGGVDGLLHITDLSWGRVSHPSEVVELDQELEVVVLDYEEE 423 Query: 252 RTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDW 311 R R+SLGLKQL + PW I +Y EG + G+V ++T+YG FVEIE+G+EGLVH+SEM W Sbjct: 424 RQRISLGLKQLRDHPWDQIGNKYDEGDVVEGKVVSITNYGAFVEIEKGIEGLVHISEMSW 483 Query: 312 TNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKI 371 T HPS++V++G VV+V +L+ID+E R+ISLG+KQ + +PW+ ++ + G + G + Sbjct: 484 TRHIEHPSQMVSLGQVVDVKILNIDQEERKISLGMKQLEPDPWEGISDRYPAGTVLTGTV 543 Query: 372 KSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISL 431 ++IT+FG+F+ ++ GIDGLVH+SD+SW + E+ V+L +D ER RISL Sbjct: 544 RNITNFGVFVEIEPGIDGLVHVSDLSWTKKIRHPGDMVDEEQELDVVILNIDEERRRISL 603 Query: 432 GVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDA 491 G KQ+ +P++ + ++G TG+V V+ KG V+L VE ++ SE ++ + Sbjct: 604 GHKQVKTNPWDQFADAYEEGNDTTGEVVRVEDKGLVVQLPLDVEAFVPGSEL-KNGPKAF 662 Query: 492 TLVLSVGDEVEAKFTGVDRKNRAISLSVRAK 522 GDE+E + D+ + I LS AK Sbjct: 663 KNHYHEGDELELQVIRFDKDQKDIVLSETAK 693 Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats. Identities = 114/448 (25%), Positives = 214/448 (47%), Gaps = 25/448 (5%) Query: 104 DAETVTGVINGKVKGGFTVELN----GIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKL 159 + + V G + + +++ GI V + G +E + + Sbjct: 195 EQDIVEGRVLRVNEDYVVIDIGYKSDGI--------VSRDEFGEEEIHPGDTVEVYLERK 246 Query: 160 DQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLL 218 + + +V+S+ + +++ EN ++G + G V+L G++ L Sbjct: 247 EDRDGQLVLSKEQADKVRRWQRVEEIYEN---EEVIEGTIIRRIKGGMIVELFDGMEAFL 303 Query: 219 HITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQL----GEDPWVAIAKRY 274 + + + V+ + + K++K + E + + ++L E+ I ++ Sbjct: 304 PGSQIDVRPVRDFESYLET--RMEFKIVKLNPENENIVVSHRELIEHELEEQRQEILEQL 361 Query: 275 PEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLD 334 G L G V N+ D+G F+++ GV+GL+H++++ W + HPS+VV + +EV+VLD Sbjct: 362 EVGQVLEGTVKNIVDFGVFIDLG-GVDGLLHITDLSWG-RVSHPSEVVELDQELEVVVLD 419 Query: 335 IDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLS 394 +EER+RISLGLKQ + +PW Q +++GD VEGK+ SIT++G F+ ++ GI+GLVH+S Sbjct: 420 YEEERQRISLGLKQLRDHPWDQIGNKYDEGDVVEGKVVSITNYGAFVEIEKGIEGLVHIS 479 Query: 395 DISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIV 454 ++SW E + G + +L +D E +ISLG+KQL DP+ G ++ Sbjct: 480 EMSWTRHIEHPSQMVSLGQVVDVKILNIDQEERKISLGMKQLEPDPWEGISDRYPAGTVL 539 Query: 455 TGKVTAVDAKGATVELADGVEGYLRASEAS-RDRVEDATLVLSVGDEVEAKFTGVDRKNR 513 TG V + G VE+ G++G + S+ S ++ ++ E++ +D + R Sbjct: 540 TGTVRNITNFGVFVEIEPGIDGLVHVSDLSWTKKIRHPGDMVDEEQELDVVILNIDEERR 599 Query: 514 AISLSVRAKDEADEKDAIATVNKQEDAN 541 ISL + + D Sbjct: 600 RISLGHKQVKTNPWDQFADAYEEGNDTT 627 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 87/348 (25%), Positives = 164/348 (47%), Gaps = 19/348 (5%) Query: 9 FEESLKEI--ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK---NAQGELEIQ 63 EE +EI + G ++ G V I V +D G + + + ++ Sbjct: 350 LEEQRQEILEQLEVGQVLEGTVKNIVDFGVFIDLGG-VDGLLHITDLSWGRVSHPSEVVE 408 Query: 64 VGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVE 123 + E++V + E+ L ++ R W + Y++ + V G + G VE Sbjct: 409 LDQELEVVVLDYEEERQRISLGLKQL-RDHPWDQIGNKYDEGDVVEGKVVSITNYGAFVE 467 Query: 124 LN-GIRAFLPGSLVD-VRPVRDTLHLE--GKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 + GI + S + R + + G+ ++ K++ +DQ+ + + + + Sbjct: 468 IEKGIEGLVHISEMSWTRHIEHPSQMVSLGQVVDVKILNIDQEERKISLGMKQL----EP 523 Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAW-KRVKHPSEIVNV 237 + + + G + G V+N+T++G FV++ G+DGL+H++D++W K+++HP ++V+ Sbjct: 524 DPWEGISDRYPAGTVLTGTVRNITNFGVFVEIEPGIDGLVHVSDLSWTKKIRHPGDMVDE 583 Query: 238 GDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE 297 E+ V +L D ER R+SLG KQ+ +PW A Y EG TG V + D G V++ Sbjct: 584 EQELDVVILNIDEERRRISLGHKQVKTNPWDQFADAYEEGNDTTGEVVRVEDKGLVVQLP 643 Query: 298 EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLG 345 VE V SE+ K + GD +E+ V+ D++++ I L Sbjct: 644 LDVEAFVPGSELKNGPKAFKNH--YHEGDELELQVIRFDKDQKDIVLS 689 >UniRef50_C1A406 30S ribosomal protein S1 n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A406_GEMAT Length = 585 Score = 519 bits (1337), Expect = e-145, Method: Composition-based stats. Identities = 218/545 (40%), Positives = 339/545 (62%), Gaps = 5/545 (0%) Query: 2 TESFAQLFEESLKEI-ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL 60 ++ + ++ E + G IV+ V+ I +++V++D G KSE IP E+FK+ Sbjct: 43 SDEYERMLELYNGTLASIEEGEIVKAHVLEIRENLVVLDIGFKSEGTIPLEEFKDMP--- 99 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 +++ GDEV+V L+ +ED G +LS++KA W + AYE + V G + K+KGG Sbjct: 100 DLKAGDEVEVLLEHLEDQEGSVVLSKKKADFMRVWERIRVAYESDQPVEGTLVKKIKGGV 159 Query: 121 TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 V+L G+ AFLPGS + +R V + L G++ EFK+IKL+++R N+VVSRR ++E+E + Sbjct: 160 VVDLMGVDAFLPGSQIALRRVPNIDELLGQKYEFKIIKLNKRRRNIVVSRRVILETERAG 219 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 +R++L++ L + KG+VKN+TD+GAF+DLGGVDGLLHITDM+W R+ HPSE+V +G E Sbjct: 220 KREKLMKELAKDQVRKGVVKNITDFGAFIDLGGVDGLLHITDMSWGRISHPSEMVQIGME 279 Query: 241 ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV 300 + +KVL D ER R+SLGLKQL PW +A +YP GT+++G+V ++T+YG F+E+E G+ Sbjct: 280 LEIKVLDIDWERERISLGLKQLQSYPWKDVAAKYPVGTRVSGKVVSITNYGAFIELEPGI 339 Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAET 360 EGLVH+SEM WT HPSK+V++G+ +E +VL +DE +ISLG+KQ + +PW Sbjct: 340 EGLVHISEMSWTRNVRHPSKIVSIGEAIEAVVLKVDETEEKISLGMKQTEQDPWVILPLK 399 Query: 361 HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL 420 + G R+ GK++++T FG F+ ++ GIDGL+H+SD+SW + KKGD + V+L Sbjct: 400 YPVGTRINGKVRNLTSFGAFVEIEPGIDGLIHISDMSWTKRVQHPSEVVKKGDAVDVVIL 459 Query: 421 QVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRA 480 +D+E +RISLG+KQ EDP+ G + GKV + KG V+L + +EG++ Sbjct: 460 NIDSENKRISLGLKQAEEDPWLRIGETYPVGTELPGKVVRLMDKGVVVDLGNDIEGFVPV 519 Query: 481 SEASRD-RVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQED 539 S+ + + V + + VD +R I L+V + E Sbjct: 520 SQLNPEGTVTNPADFTYEAMNFVMRVLEVDPIHRRIVLAVTSIPEEQPPKPAEPSKVHSS 579 Query: 540 ANFSN 544 + Sbjct: 580 EDELG 584 >UniRef50_A4SGB6 SSU ribosomal protein S1P n=12 Tax=Chlorobiaceae RepID=A4SGB6_PROVI Length = 602 Score = 507 bits (1307), Expect = e-142, Method: Composition-based stats. Identities = 211/530 (39%), Positives = 329/530 (62%), Gaps = 5/530 (0%) Query: 5 FAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQV 64 QL+ +L +I IV+G +V+I V +D G KSE + +F++ E EIQV Sbjct: 46 MEQLYTSTLNQINQD--EIVKGRIVSISNKDVTIDVGYKSEGIVSLLEFRD---EDEIQV 100 Query: 65 GDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL 124 GD+V+V L+ +ED G+ +LS++KA W + + E+ ++G I +VKGG TV L Sbjct: 101 GDDVEVYLENIEDKMGQLILSKKKADVLRIWDKIYDSIENDTIISGKIINRVKGGMTVSL 160 Query: 125 NGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQ 184 +G+ AFLPGS +DV+PVRD L G+ ++F+V+K++ N+VVS + ++E E +A R++ Sbjct: 161 SGVEAFLPGSQIDVKPVRDFDALVGQTMDFRVVKINPVTQNIVVSHKVILEEEYAARREE 220 Query: 185 LLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 +L++++ GM ++G VKN+TD+G FVDLGG+DGL+HITD+ W R+ HPSE+V++ I V Sbjct: 221 MLDSIKVGMVLEGTVKNITDFGIFVDLGGLDGLVHITDITWGRINHPSEVVDLDQPIKVV 280 Query: 245 VLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLV 304 V+ FD RVSLG+KQL PW I +YP G+K GRV ++TDYG FVEIE+G+EGLV Sbjct: 281 VVGFDENTKRVSLGMKQLEAHPWENIELKYPVGSKAQGRVVSITDYGAFVEIEKGIEGLV 340 Query: 305 HVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKG 364 H+SEM WT HP + V +G VE ++L+ID++ ++SL +K+ +PW +E + + Sbjct: 341 HISEMSWTQHIKHPGQFVTLGQEVECVILNIDKDHTKLSLSMKRVNEDPWIALSEKYVEN 400 Query: 365 DRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDA 424 R +G + +ITDFG+F+ L+ G+DGLVH+SD+SW KK E+ VL+ D Sbjct: 401 TRHKGTVSNITDFGVFVELEPGVDGLVHISDLSWTKKIRHPSELVKKNQELEVKVLKFDV 460 Query: 425 ERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEAS 484 RI+LG KQ+ DP+ + GA + +++ + KG V L V+G++ A+ Sbjct: 461 HARRIALGHKQMNPDPWGGFEQQYAVGAESSAEISQIIEKGVIVILPGDVDGFVPATHLL 520 Query: 485 RDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATV 534 + V+D +GD + + D++N+ I LS + K+ I + Sbjct: 521 QGGVKDIHSSFKIGDALPLRVIEFDKENKRIILSALEYFKDKSKEEIESY 570 Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats. Identities = 92/374 (24%), Positives = 172/374 (45%), Gaps = 19/374 (5%) Query: 161 QKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLH 219 +K+ S+ L + + VKG + ++++ +D+G +G++ Sbjct: 29 RKKIKFFAHYEPAELSQMEQLYTSTLNQINQDEIVKGRIVSISNKDVTIDVGYKSEGIVS 88 Query: 220 ITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGE-DPWVAIAKRYPEGT 278 + + + + VGD++ V + + + ++ L K+ W I T Sbjct: 89 LLEFRD------EDEIQVGDDVEVYLENIEDKMGQLILSKKKADVLRIWDKIYDSIENDT 142 Query: 279 KLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEE 338 ++G++ N G V + GVE + S++D K + + VG ++ V+ I+ Sbjct: 143 IISGKIINRVKGGMTVSLS-GVEAFLPGSQID--VKPVRDFDAL-VGQTMDFRVVKINPV 198 Query: 339 RRRISLGLK----QCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLS 394 + I + K + A ++ ++ G +EG +K+ITDFGIF+ L GG+DGLVH++ Sbjct: 199 TQNIVVSHKVILEEEYAARREEMLDSIKVGMVLEGTVKNITDFGIFVDL-GGLDGLVHIT 257 Query: 395 DISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIV 454 DI+W I VV+ D +R+SLG+KQL P+ N G+ Sbjct: 258 DITWGRIN-HPSEVVDLDQPIKVVVVGFDENTKRVSLGMKQLEAHPWENIELKYPVGSKA 316 Query: 455 TGKVTAVDAKGATVELADGVEGYLRASEAS-RDRVEDATLVLSVGDEVEAKFTGVDRKNR 513 G+V ++ GA VE+ G+EG + SE S ++ +++G EVE +D+ + Sbjct: 317 QGRVVSITDYGAFVEIEKGIEGLVHISEMSWTQHIKHPGQFVTLGQEVECVILNIDKDHT 376 Query: 514 AISLSVRAKDEADE 527 +SLS++ +E Sbjct: 377 KLSLSMKRVNEDPW 390 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 57/278 (20%), Positives = 107/278 (38%), Gaps = 14/278 (5%) Query: 15 EIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK----NAQGELEIQVGDEVDV 70 E++ GS +G VV+I V+ E + + + +G EV+ Sbjct: 307 ELKYPVGSKAQGRVVSITDYGAFVEIEKGIEGLVHISEMSWTQHIKHPGQFVTLGQEVEC 366 Query: 71 ALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRA 129 + ++ + LS ++ + WI L + Y + G ++ G VEL G+ Sbjct: 367 VILNIDKDHTKLSLSMKRV-NEDPWIALSEKYVENTRHKGTVSNITDFGVFVELEPGVDG 425 Query: 130 FLPGSLVD-VRPVRDTLHLE--GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLL 186 + S + + +R L +ELE KV+K D + + + N Sbjct: 426 LVHISDLSWTKKIRHPSELVKKNQELEVKVLKFDVHARRIALGHK----QMNPDPWGGFE 481 Query: 187 ENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEITVKV 245 + G E + + + G V L G VDG + T + VK +GD + ++V Sbjct: 482 QQYAVGAESSAEISQIIEKGVIVILPGDVDGFVPATHLLQGGVKDIHSSFKIGDALPLRV 541 Query: 246 LKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGR 283 ++FD+E R+ L + +D + Y + + Sbjct: 542 IEFDKENKRIILSALEYFKDKSKEEIESYLQAHPNEKK 579 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 45/283 (15%), Positives = 115/283 (40%), Gaps = 17/283 (6%) Query: 272 KRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVM 331 + + + GR+ ++++ +++ EG+V + E + VGD VEV Sbjct: 55 NQINQDEIVKGRIVSISNKDVTIDVGYKSEGIVSLLE-------FRDEDEIQVGDDVEVY 107 Query: 332 VLDIDEERRRISLGLKQCKA-NPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGL 390 + +I+++ ++ L K+ W + ++ + GKI + G+ + L G++ Sbjct: 108 LENIEDKMGQLILSKKKADVLRIWDKIYDSIENDTIISGKIINRVKGGMTVSL-SGVEAF 166 Query: 391 VHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNW----VA 446 + S I + G + V++++ + I + K + E+ + + Sbjct: 167 LPGSQIDVKPVRDFDA---LVGQTMDFRVVKINPVTQNIVVSHKVILEEEYAARREEMLD 223 Query: 447 LNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFT 506 K G ++ G V + G V+L G++G + ++ + R+ + V+ + ++ Sbjct: 224 SIKVGMVLEGTVKNITDFGIFVDLG-GLDGLVHITDITWGRINHPSEVVDLDQPIKVVVV 282 Query: 507 GVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAE 549 G D + +SL ++ + ++ A ++ + Sbjct: 283 GFDENTKRVSLGMKQLEAHPWENIELKYPVGSKAQGRVVSITD 325 >UniRef50_Q9Z8M3 30S ribosomal protein S1 n=18 Tax=Chlamydiae/Verrucomicrobia group RepID=RS1_CHLPN Length = 580 Score = 507 bits (1306), Expect = e-142, Method: Composition-based stats. Identities = 227/516 (43%), Positives = 337/516 (65%), Gaps = 3/516 (0%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDV 70 E + E +PG+I++G VV I+KD V+VD GLKSE IP +F ++ L + G EV+V Sbjct: 42 EEESDNEIQPGAILKGTVVDINKDFVVVDVGLKSEGVIPMSEFIDSSEGLVL--GAEVEV 99 Query: 71 ALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAF 130 LD ED G+ +LSREKA R W + E+ V G I KVKGG V++ G+ AF Sbjct: 100 YLDQAEDEEGKVVLSREKATRQRQWEYILAHCEEGSIVKGQITRKVKGGLIVDI-GMEAF 158 Query: 131 LPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQ 190 LPGS +D + +++ GK EFK++K++ +R N+VVSRR ++E+E +++ +L+E + Sbjct: 159 LPGSQIDNKKIKNLDDYVGKVCEFKILKINVERRNIVVSRRELLEAERISKKAELIEQIS 218 Query: 191 EGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDR 250 G KG+VKN+TD+G F+DL G+DGLLHITDM WKR++HPSE+V + E+ V +L D+ Sbjct: 219 IGEYRKGVVKNITDFGVFLDLDGIDGLLHITDMTWKRIRHPSEMVELNQELEVIILSVDK 278 Query: 251 ERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMD 310 E+ RV+LGLKQ +PW I K+YP G ++ G++ L YG F+EIEEG+EGL+H+SEM Sbjct: 279 EKGRVALGLKQKEHNPWEDIEKKYPPGKRVLGKIVKLLPYGAFIEIEEGIEGLIHISEMS 338 Query: 311 WTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGK 370 W + PS+VVN GD VE +VL I ++ +ISLGLKQ + NPW E + G V + Sbjct: 339 WVKNIVDPSEVVNKGDEVEAIVLSIQKDEGKISLGLKQTERNPWDNIEEKYPIGLHVNAE 398 Query: 371 IKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERIS 430 IK++T++G F+ L+ GI+GL+H+SD+SW +KKG+ + AV+L VD E ++I+ Sbjct: 399 IKNLTNYGAFVELEPGIEGLIHISDMSWIKKVSHPSELFKKGNSVEAVILSVDKESKKIT 458 Query: 431 LGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVED 490 LGVKQL+ +P+N A+ G +++G VT + A GA VEL +G+EG + SE S Sbjct: 459 LGVKQLSSNPWNEIEAMFPAGTVISGVVTKITAFGAFVELQNGIEGLIHVSELSDKPFAK 518 Query: 491 ATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEAD 526 ++S+G+ V AK +D ++ +SLSV+ + Sbjct: 519 IEDIISIGENVSAKVIKLDPDHKKVSLSVKEYLADN 554 Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 97/366 (26%), Positives = 175/366 (47%), Gaps = 19/366 (5%) Query: 176 SENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEI 234 ++ ++ +Q G +KG V ++ VD+G +G++ +++ SE Sbjct: 36 HRITSSEEESDNEIQPGAILKGTVVDINKDFVVVDVGLKSEGVIPMSEFIDS-----SEG 90 Query: 235 VNVGDEITVKVLKFDRERTRVSLGL-KQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCF 293 + +G E+ V + + + E +V L K + W I EG+ + G++T G Sbjct: 91 LVLGAEVEVYLDQAEDEEGKVVLSREKATRQRQWEYILAHCEEGSIVKGQITRKVKGGLI 150 Query: 294 VEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP 353 V+I G+E + S++D K + V G V E +L I+ ERR I + ++ Sbjct: 151 VDI--GMEAFLPGSQID-NKKIKNLDDYV--GKVCEFKILKINVERRNIVVSRRELLEAE 205 Query: 354 WQQFA----ETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREY 409 E + G+ +G +K+ITDFG+F+ LD GIDGL+H++D++W Sbjct: 206 RISKKAELIEQISIGEYRKGVVKNITDFGVFLDLD-GIDGLLHITDMTWKRI-RHPSEMV 263 Query: 410 KKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVE 469 + E+ ++L VD E+ R++LG+KQ +P+ + G V GK+ + GA +E Sbjct: 264 ELNQELEVIILSVDKEKGRVALGLKQKEHNPWEDIEKKYPPGKRVLGKIVKLLPYGAFIE 323 Query: 470 LADGVEGYLRASEASR-DRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEK 528 + +G+EG + SE S + D + V++ GDEVEA + + ISL ++ + Sbjct: 324 IEEGIEGLIHISEMSWVKNIVDPSEVVNKGDEVEAIVLSIQKDEGKISLGLKQTERNPWD 383 Query: 529 DAIATV 534 + Sbjct: 384 NIEEKY 389 >UniRef50_B0VI92 30S ribosomal subunit protein S1 (Modular protein) n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VI92_9BACT Length = 932 Score = 507 bits (1306), Expect = e-142, Method: Composition-based stats. Identities = 215/522 (41%), Positives = 324/522 (62%), Gaps = 8/522 (1%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEI 62 + ++EES + G I+ G VV I V VD G KSE IP +F Sbjct: 100 QEMLSMYEESFSSF--KKGEIIEGTVVDITDKDVRVDIGFKSEGIIPISEFAYTGI---P 154 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 ++ + V ++ +E+G G+ LLS++KA +++A+ D +++G+I +VKGG V Sbjct: 155 ELNSVIKVYINEIENGEGKLLLSKKKADYMINIERIKQAFADKSSLSGIIRRRVKGGMIV 214 Query: 123 ELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 ++ GI AFLPGS + ++P+ + GKEL FKV+ +D++ +N+++SRR V+E E +R Sbjct: 215 DVLGIEAFLPGSQMSLKPIPNLDQFIGKELYFKVVNIDEEHHNIILSRRQVLEEEAEQKR 274 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 +LL +Q E+ G VKN+T YGAF+DLGG+DGLLH+TDM+W ++ HPSE++ +GD++ Sbjct: 275 QELLRKIQIDAELDGEVKNITQYGAFIDLGGIDGLLHLTDMSWGKLNHPSEMLQIGDKVK 334 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 VKV+ FD E R+SLG+KQL PW I +YPEG+++TG+V NL +G FVE+E GVEG Sbjct: 335 VKVINFDPETNRISLGMKQLVPHPWENIEIKYPEGSRVTGKVVNLKPFGAFVELEPGVEG 394 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHN 362 LVH+SEM WT K K + +G+ + +VLDID+E +RISLG+KQ + NPW + + Sbjct: 395 LVHISEMSWTKKITDAHKFLKIGETINAIVLDIDKENKRISLGMKQMEPNPWLTIEDRYP 454 Query: 363 KGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQV 422 G + KIKS+T FG F+ ++ GIDGL+H+SDISW YKK E+ AVVL + Sbjct: 455 IGTILTRKIKSLTAFGAFVEIEEGIDGLIHISDISWTKRIYHPREVYKKNQEVEAVVLSI 514 Query: 423 DAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELA---DGVEGYLR 479 D + R++LGVKQL DP+ V GK+ + KG V++ D VEG++ Sbjct: 515 DRAQHRVALGVKQLVPDPWETLDQSLPINTEVKGKIGKLIPKGVLVDIPVNNDVVEGFVP 574 Query: 480 ASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRA 521 S + ++E + +G+E+ K +D +NR + LSV+A Sbjct: 575 VSHLAIPKLEHSEDAFYIGEEIPLKVIELDMENRRLILSVKA 616 Score = 296 bits (759), Expect = 1e-78, Method: Composition-based stats. Identities = 118/449 (26%), Positives = 224/449 (49%), Gaps = 17/449 (3%) Query: 86 REKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRPVRDT 144 +E + + +++ E + G + V++ +P S + + Sbjct: 97 KEHQEMLSMYEESFSSFKKGEIIEGTVVDITDKDVRVDIGFKSEGIIPISEFAYTGIPEL 156 Query: 145 LHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTD 204 + ++ + +++ +++S++ N Q + + GI++ Sbjct: 157 NSV----IKVYINEIENGEGKLLLSKKKADYMINIERIKQAFAD---KSSLSGIIRRRVK 209 Query: 205 YGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGE 264 G VD+ G++ L + M+ K + + + +G E+ KV+ D E + L +Q+ E Sbjct: 210 GGMIVDVLGIEAFLPGSQMSLKPIPNLDQF--IGKELYFKVVNIDEEHHNIILSRRQVLE 267 Query: 265 DPWV----AIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSK 320 + + ++ +L G V N+T YG F+++ G++GL+H+++M W K HPS+ Sbjct: 268 EEAEQKRQELLRKIQIDAELDGEVKNITQYGAFIDLG-GIDGLLHLTDMSWG-KLNHPSE 325 Query: 321 VVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIF 380 ++ +GD V+V V++ D E RISLG+KQ +PW+ + +G RV GK+ ++ FG F Sbjct: 326 MLQIGDKVKVKVINFDPETNRISLGMKQLVPHPWENIEIKYPEGSRVTGKVVNLKPFGAF 385 Query: 381 IGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDP 440 + L+ G++GLVH+S++SW +A + K G+ I A+VL +D E +RISLG+KQ+ +P Sbjct: 386 VELEPGVEGLVHISEMSWTKKITDAHKFLKIGETINAIVLDIDKENKRISLGMKQMEPNP 445 Query: 441 FNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEAS-RDRVEDATLVLSVGD 499 + G I+T K+ ++ A GA VE+ +G++G + S+ S R+ V Sbjct: 446 WLTIEDRYPIGTILTRKIKSLTAFGAFVEIEEGIDGLIHISDISWTKRIYHPREVYKKNQ 505 Query: 500 EVEAKFTGVDRKNRAISLSVRAKDEADEK 528 EVEA +DR ++L V+ + Sbjct: 506 EVEAVVLSIDRAQHRVALGVKQLVPDPWE 534 Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 52/279 (18%), Positives = 115/279 (41%), Gaps = 17/279 (6%) Query: 268 VAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDV 327 + +G + G V ++TD V+I EG++ +SE +T + + V Sbjct: 107 EESFSSFKKGEIIEGTVVDITDKDVRVDIGFKSEGIIPISEFAYTG-------IPELNSV 159 Query: 328 VEVMVLDIDEERRRISLGLKQCK-ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGG 386 ++V + +I+ ++ L K+ ++ + + G I+ G+ + + G Sbjct: 160 IKVYINEIENGEGKLLLSKKKADYMINIERIKQAFADKSSLSGIIRRRVKGGMIVDVL-G 218 Query: 387 IDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVA 446 I+ + S +S + ++ G E+ V+ +D E I L +Q+ E+ Sbjct: 219 IEAFLPGSQMSLKPIPN--LDQF-IGKELYFKVVNIDEEHHNIILSRRQVLEEEAEQKRQ 275 Query: 447 LNKKG----AIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVE 502 + A + G+V + GA ++L G++G L ++ S ++ + +L +GD+V+ Sbjct: 276 ELLRKIQIDAELDGEVKNITQYGAFIDLG-GIDGLLHLTDMSWGKLNHPSEMLQIGDKVK 334 Query: 503 AKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDAN 541 K D + ISL ++ ++ + Sbjct: 335 VKVINFDPETNRISLGMKQLVPHPWENIEIKYPEGSRVT 373 Score = 75.8 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 28/180 (15%), Positives = 71/180 (39%), Gaps = 11/180 (6%) Query: 21 GSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK----NAQGELEIQVGDEVDVALDAVE 76 G+I+ + ++ V+ + I + EV+ + +++ Sbjct: 456 GTILTRKIKSLTAFGAFVEIEEGIDGLIHISDISWTKRIYHPREVYKKNQEVEAVVLSID 515 Query: 77 DGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL----NGIRAFLP 132 L ++ + W TL+++ V G I + G V++ + + F+P Sbjct: 516 RAQHRVALGVKQLV-PDPWETLDQSLPINTEVKGKIGKLIPKGVLVDIPVNNDVVEGFVP 574 Query: 133 GSLVDVRPVRDTLH--LEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQ 190 S + + + + G+E+ KVI+LD + +++S +A S + +++ + + Sbjct: 575 VSHLAIPKLEHSEDAFYIGEEIPLKVIELDMENRRLILSVKAFFFSRDPKLQEEYIALHE 634 Score = 68.1 bits (165), Expect = 8e-10, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 75/185 (40%), Gaps = 11/185 (5%) Query: 354 WQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGD 413 +++ + KG+ +EG + ITD + + + +G++ +S+ ++ E Sbjct: 106 YEESFSSFKKGEIIEGTVVDITDKDVRVDIGFKSEGIIPISEFAYTGIPE-------LNS 158 Query: 414 EIAAVVLQVDAERERISLGVKQLAED-PFNNWVALNKKGAIVTGKVTAVDAKGATVELAD 472 I + +++ ++ L K+ + ++G + G V++ Sbjct: 159 VIKVYINEIENGEGKLLLSKKKADYMINIERIKQAFADKSSLSGIIRRRVKGGMIVDVL- 217 Query: 473 GVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIA 532 G+E +L S+ S + + +G E+ K +D ++ I LS R E + + Sbjct: 218 GIEAFLPGSQMSLKPIPNLDQF--IGKELYFKVVNIDEEHHNIILSRRQVLEEEAEQKRQ 275 Query: 533 TVNKQ 537 + ++ Sbjct: 276 ELLRK 280 >UniRef50_Q1RJH1 30S ribosomal protein S1 n=16 Tax=Alphaproteobacteria RepID=RS1_RICBR Length = 572 Score = 506 bits (1303), Expect = e-141, Method: Composition-based stats. Identities = 233/554 (42%), Positives = 354/554 (63%), Gaps = 3/554 (0%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE 61 + F+++ E ++ +PG++V+G V +VV+VD GLK+E IP +F + Sbjct: 21 EDDFSKMLE-TVDTSHIKPGTVVKGQ-VVDINEVVVVDVGLKNEGRIPKSEFLLSPAHKL 78 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 ++GD VDV ++ E G+T LSREKA + E W LE E V G I G+VKGGFT Sbjct: 79 PEIGDLVDVYIEKTEGHSGKT-LSREKAIKEELWGQLELICSKGEFVDGTIFGRVKGGFT 137 Query: 122 VELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 V+L+G+ AFLPGS VDVRP++D + FK++ +D+K N+VVSRRA++E S Sbjct: 138 VDLSGVVAFLPGSQVDVRPIKDPSSIMNIRQPFKILSMDKKLGNIVVSRRAILEESRSEA 197 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEI 241 RD++L ++EGM ++G VKN+TDYGAF+DLG VDGLLH+TD++W RV HPSE++ ++ Sbjct: 198 RDEMLSKIKEGMILEGTVKNITDYGAFIDLGSVDGLLHLTDISWARVNHPSEVLEFNQKV 257 Query: 242 TVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVE 301 V V+KF+ E R+SLG+KQL +PW I + +P G K+TG+VTN DYG F+E+++G+E Sbjct: 258 KVMVIKFNEETKRISLGMKQLDYNPWEKIKEEFPVGKKMTGKVTNFADYGVFIELKDGLE 317 Query: 302 GLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETH 361 GLVH SE+ W N +P K + +G VE MVL++D E+ R+SL +KQC+ NP +FAET+ Sbjct: 318 GLVHSSEISWLKSNQNPRKTLTIGQEVEFMVLEVDTEKHRVSLSIKQCQQNPLIKFAETN 377 Query: 362 NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQ 421 G ++ I++ITDFGIF+ L +DG++H DI+W G E ++ YKKGDE+ VL Sbjct: 378 PVGTVIKAPIRNITDFGIFVALSDNLDGMIHEGDITWEDNGNELLKTYKKGDEVECKVLT 437 Query: 422 VDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRAS 481 ++ E+E+ISLG+KQL +P+ KKG +V VTA+ G V + D G+++ S Sbjct: 438 INIEKEQISLGIKQLTPNPYQGIADEYKKGTVVKAVVTAIKDDGLEVLVNDKAAGFIKKS 497 Query: 482 EASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDAN 541 + S ++ E + +V E+EAK +++ I LS++A A+ + A+ ++ Sbjct: 498 DLSDEKEEQKPEMFAVDQEIEAKVASIEKSTNKILLSIKAYKIAERQKALKEYGSSDNTT 557 Query: 542 FSNNAMAEAFKAAK 555 + +A A + +K Sbjct: 558 NMGDILANALEDSK 571 >UniRef50_B2UME1 Ribosomal protein S1 n=6 Tax=Chlamydiae/Verrucomicrobia group RepID=B2UME1_AKKM8 Length = 562 Score = 500 bits (1288), Expect = e-140, Method: Composition-based stats. Identities = 231/527 (43%), Positives = 339/527 (64%), Gaps = 7/527 (1%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE 61 T A+L + +E+ R GSIV G + I VVLVD G KSE AI +F++ E Sbjct: 3 TTELAELIDSKFREL--REGSIVTGTIQEIRPQVVLVDIGYKSEGAISISEFEDE----E 56 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 I+VGD+++V L+ +E+ G +LS+EKA + W + Y D V G + VKGG Sbjct: 57 IEVGDQIEVLLERLENDEGIVVLSKEKAAHKQNWDKIVGVYRDGGLVKGKVKSVVKGGLM 116 Query: 122 VELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 V + G+ AFLPGS VD+ P RD GK EFK++K++ R N+V+SRR VIE+E + + Sbjct: 117 VNV-GVEAFLPGSQVDIIPPRDLNEYVGKVYEFKIVKVNDDRKNIVLSRREVIEAERADQ 175 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEI 241 R + LE ++EG +V+GIVKN+TD+GAFVDL G+DGLLHITDM+W RV HPSE++++G + Sbjct: 176 RQRFLETVKEGDKVEGIVKNITDFGAFVDLRGMDGLLHITDMSWGRVNHPSEMLHIGQSL 235 Query: 242 TVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVE 301 V +L+ DRE+ RVSLGLKQ+ ++PW I ++YP + + GRVT L YG FVE+E+GVE Sbjct: 236 EVVILEVDREKERVSLGLKQMTDNPWADIERKYPINSHVKGRVTKLLPYGAFVELEKGVE 295 Query: 302 GLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETH 361 GLVHVSE+ W + PS V+ + +E +VL I + ++ISLG++Q + NPW Sbjct: 296 GLVHVSELSWVKRITRPSDVLKLDQEIEAVVLSISVKEQKISLGVRQLEDNPWADIESRF 355 Query: 362 NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQ 421 G ++G+++++T +G F+GL+ GIDG++H+SD+SW KKGDE+ A+VL+ Sbjct: 356 PIGTVIKGQVRNLTPYGAFVGLEEGIDGMIHVSDMSWTRKINHPSEVLKKGDEVEAIVLE 415 Query: 422 VDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRAS 481 + E +R+SLG+KQL DP+ + K G +VTG+V + + GA V L ++G + S Sbjct: 416 IKKEDQRVSLGIKQLESDPWESINDRFKVGDMVTGQVAKIASFGAFVNLDGDIDGLIHIS 475 Query: 482 EASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEK 528 + S D VE V+ VGDE+ A+ VD R I LS++A + E+ Sbjct: 476 QLSEDHVERVKDVIKVGDEITARVIKVDSIERRIGLSIKAVNYDTEQ 522 Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats. Identities = 123/454 (27%), Positives = 228/454 (50%), Gaps = 21/454 (4%) Query: 102 YEDAETVTGVINGKVKGGFTVELNGIRAFLPGSL--VDVRPVRDTLHLEGKELEFKVIKL 159 + VTG I V++ S + + D G ++E + +L Sbjct: 17 LREGSIVTGTIQEIRPQVVLVDIG------YKSEGAISISEFEDEEIEVGDQIEVLLERL 70 Query: 160 DQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLH 219 + VV+S+ +N D+++ ++G VKG VK++ G V++ GV+ L Sbjct: 71 ENDEGIVVLSKEKAAHKQN---WDKIVGVYRDGGLVKGKVKSVVKGGLMVNV-GVEAFLP 126 Query: 220 ITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGE----DPWVAIAKRYP 275 + + + +E VG K++K + +R + L +++ E D + Sbjct: 127 GSQVDIIPPRDLNEY--VGKVYEFKIVKVNDDRKNIVLSRREVIEAERADQRQRFLETVK 184 Query: 276 EGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDI 335 EG K+ G V N+TD+G FV++ G++GL+H+++M W N HPS+++++G +EV++L++ Sbjct: 185 EGDKVEGIVKNITDFGAFVDL-RGMDGLLHITDMSWGRVN-HPSEMLHIGQSLEVVILEV 242 Query: 336 DEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSD 395 D E+ R+SLGLKQ NPW + V+G++ + +G F+ L+ G++GLVH+S+ Sbjct: 243 DREKERVSLGLKQMTDNPWADIERKYPINSHVKGRVTKLLPYGAFVELEKGVEGLVHVSE 302 Query: 396 ISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVT 455 +SW K EI AVVL + + ++ISLGV+QL ++P+ + + G ++ Sbjct: 303 LSWVKRITRPSDVLKLDQEIEAVVLSISVKEQKISLGVRQLEDNPWADIESRFPIGTVIK 362 Query: 456 GKVTAVDAKGATVELADGVEGYLRASEASRDR-VEDATLVLSVGDEVEAKFTGVDRKNRA 514 G+V + GA V L +G++G + S+ S R + + VL GDEVEA + ++++ Sbjct: 363 GQVRNLTPYGAFVGLEEGIDGMIHVSDMSWTRKINHPSEVLKKGDEVEAIVLEIKKEDQR 422 Query: 515 ISLSVRAKDEADEKDAIATVNKQEDANFSNNAMA 548 +SL ++ + + + +A Sbjct: 423 VSLGIKQLESDPWESINDRFKVGDMVTGQVAKIA 456 Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats. Identities = 97/352 (27%), Positives = 166/352 (47%), Gaps = 16/352 (4%) Query: 18 TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK---NAQGELEIQVGDEVDVALDA 74 + G V G+V I VD + + + +G ++V + Sbjct: 183 VKEGDKVEGIVKNITDFGAFVDLRG-MDGLLHITDMSWGRVNHPSEMLHIGQSLEVVILE 241 Query: 75 VEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFLPG 133 V+ L ++ W +E+ Y V G + + G VEL G+ + Sbjct: 242 VDREKERVSLGLKQMT-DNPWADIERKYPINSHVKGRVTKLLPYGAFVELEKGVEGLVHV 300 Query: 134 SLVD-VRPVRDTLHLEG--KELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQ 190 S + V+ + + +E+E V+ + K + + R + ++ + + Sbjct: 301 SELSWVKRITRPSDVLKLDQEIEAVVLSISVKEQKISLGVRQLEDNPWADIESRF----P 356 Query: 191 EGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKR-VKHPSEIVNVGDEITVKVLKF 248 G +KG V+NLT YGAFV L G+DG++H++DM+W R + HPSE++ GDE+ VL+ Sbjct: 357 IGTVIKGQVRNLTPYGAFVGLEEGIDGMIHVSDMSWTRKINHPSEVLKKGDEVEAIVLEI 416 Query: 249 DRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSE 308 +E RVSLG+KQL DPW +I R+ G +TG+V + +G FV ++ ++GL+H+S+ Sbjct: 417 KKEDQRVSLGIKQLESDPWESINDRFKVGDMVTGQVAKIASFGAFVNLDGDIDGLIHISQ 476 Query: 309 MDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAET 360 + + V+ VGD + V+ +D RRI L +K + Q ET Sbjct: 477 LS-EDHVERVKDVIKVGDEITARVIKVDSIERRIGLSIKAVNYDTEQLRRET 527 Score = 47.6 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 29/87 (33%), Gaps = 3/87 (3%) Query: 18 TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE---LEIQVGDEVDVALDA 74 + G +V G V I V+ + I Q E I+VGDE+ + Sbjct: 442 FKVGDMVTGQVAKIASFGAFVNLDGDIDGLIHISQLSEDHVERVKDVIKVGDEITARVIK 501 Query: 75 VEDGFGETLLSREKAKRHEAWITLEKA 101 V+ LS + + E A Sbjct: 502 VDSIERRIGLSIKAVNYDTEQLRRETA 528 >UniRef50_C6XS49 RNA binding S1 domain protein n=62 Tax=Bacteroidetes RepID=C6XS49_PEDHD Length = 644 Score = 479 bits (1233), Expect = e-133, Method: Composition-based stats. Identities = 192/514 (37%), Positives = 325/514 (63%), Gaps = 9/514 (1%) Query: 5 FAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQV 64 F ++ ++ +I G I+ G VV+I+ V+++ G KS+ + +F++ +++V Sbjct: 74 FEDMYTDTFNQIT--QGEIISGTVVSINNKDVVLNVGFKSDGLVSTSEFRDTP---DLKV 128 Query: 65 GDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL 124 GD+VDV ++A ED G+ +LSR++AK +W ++ +A ++ + G + + KGG V++ Sbjct: 129 GDKVDVFVEAPEDANGQLILSRKRAKTQRSWESINEALDNDRIINGFVKSRTKGGLIVDI 188 Query: 125 NGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQ 184 G+ AFLPGS +D++P+RD GK +EFKV+K++ + NVVVS + +IE + +++ + Sbjct: 189 MGVEAFLPGSQIDIKPIRDYDVYVGKTMEFKVVKINHEFKNVVVSHKILIEDDLESQKVE 248 Query: 185 LLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 ++ L++G ++G VKN+TD+G F+DLGGVDGLLHITD++W R++HP E++++ ++I V Sbjct: 249 IVSKLEKGQVLEGTVKNITDFGVFIDLGGVDGLLHITDISWGRIEHPKEVLSLDEKINVV 308 Query: 245 VLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLV 304 VL FD E+ R++LGLKQL PW ++ G+K+ G++ + DYG F+EI GVEGL+ Sbjct: 309 VLDFDDEKKRIALGLKQLTPHPWESLNADLAIGSKVKGKIVTVADYGAFLEIIPGVEGLI 368 Query: 305 HVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKG 364 HVSEM W+ P + + VGD +E VL +D E R++SLG+KQ +PWQ AE + G Sbjct: 369 HVSEMSWSQNLRSPQEFLKVGDEIEAEVLTLDREDRKMSLGIKQLTQDPWQNVAERYPIG 428 Query: 365 DRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDA 424 + +K++T+FG+F+ ++ GIDGL+H+SD+SW+ K GD +A VVL++D Sbjct: 429 SKHTAVVKNMTNFGVFVEIEEGIDGLIHISDLSWSKKVNHPNEFTKVGDTLAVVVLELDV 488 Query: 425 ERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEAS 484 + ++SLG KQL E+P++ + + +I G V V KGA + L GVEG++ + Sbjct: 489 DNRKLSLGHKQLEENPWDTFETIFTLDSIHQGTVVKVTDKGAVIALPYGVEGFVPTKHMA 548 Query: 485 RDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLS 518 ++ V+ + + K ++ + I +S Sbjct: 549 KE----DGSVIKAEETNDFKIIEFNKDAKRIVVS 578 Score = 73.1 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 37/206 (17%), Positives = 79/206 (38%), Gaps = 12/206 (5%) Query: 347 KQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAV 406 ++ + + +G+ + G + SI + + + + DGLV S+ Sbjct: 71 RKKFEDMYTDTFNQITQGEIISGTVVSINNKDVVLNVGFKSDGLVSTSEF-------RDT 123 Query: 407 REYKKGDEIAAVVLQVDAERERISLGVKQL-AEDPFNNWVALNKKGAIVTGKVTAVDAKG 465 + K GD++ V + ++ L K+ + + + I+ G V + G Sbjct: 124 PDLKVGDKVDVFVEAPEDANGQLILSRKRAKTQRSWESINEALDNDRIINGFVKSRTKGG 183 Query: 466 ATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEA 525 V++ GVE +L S+ + D + VG +E K ++ + + + +S + E Sbjct: 184 LIVDIM-GVEAFLPGSQIDIKPIRDYD--VYVGKTMEFKVVKINHEFKNVVVSHKILIED 240 Query: 526 D-EKDAIATVNKQEDANFSNNAMAEA 550 D E + V+K E + Sbjct: 241 DLESQKVEIVSKLEKGQVLEGTVKNI 266 >UniRef50_B2S2M7 Ribosomal protein S1 n=5 Tax=Bacteria RepID=B2S2M7_TREPS Length = 863 Score = 474 bits (1221), Expect = e-132, Method: Composition-based stats. Identities = 191/561 (34%), Positives = 289/561 (51%), Gaps = 19/561 (3%) Query: 9 FEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEV 68 +E PGS+ G VV ++ V VD G KSE +P E+F E + GD V Sbjct: 310 LQERYSFEAPEPGSVRMGTVVQVNAGTVFVDIGGKSEGRVPVEEF-----EAPPKAGDGV 364 Query: 69 DVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVING--KVKGGFTVELN- 125 V ++ V E LS+ KA R + L A D V G I + K GF V+L Sbjct: 365 RVYVERVTPYGPE--LSKTKADRLGLKVKLRDAERDGTPVEGRIVRLTEKKSGFEVDLGA 422 Query: 126 GIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRN-----NVVVSRRAVIESENSA 180 G+ AFLP S D + V L G +F + ++ Q + N+V++RR +E Sbjct: 423 GMMAFLPISQSDCQKVDAPESLIGLTSKFYIERISQSKQHRGNDNIVINRRRYLEERARQ 482 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 R++ ++ V G+VK+ T +GAF+DLGG DGLLH+ DM+W V P E V G Sbjct: 483 AREEFFNSVHIEDSVSGVVKSFTSFGAFIDLGGFDGLLHVNDMSWGHVARPREFVKKGQT 542 Query: 241 ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV 300 I +KV++ D+ R++L LK DPW+ ++ + GRVT + D+G F+E+ EG+ Sbjct: 543 IELKVIRLDQAEKRINLSLKHFQPDPWLEFENKFGVNDVVKGRVTKIADFGAFIELAEGI 602 Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAET 360 EGL H+SE W K PS +V +GD VE M+L D + R+SLGLKQ ANPW++ Sbjct: 603 EGLAHISEFSWVKKTSKPSDMVKIGDEVECMILGYDIQAGRVSLGLKQVTANPWEEIEAR 662 Query: 361 HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL 420 + G R +I +T+ G FI ++ GIDG +H+ D+SW A E + G EI +V+ Sbjct: 663 YPVGARFTRRIVKVTNAGAFIEMEEGIDGFLHVDDLSWVKRTRPADHELEVGKEIECMVI 722 Query: 421 QVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRA 480 + D + RI LGVKQL+++P+ + G+ V G+V++V G V + GVEG +R Sbjct: 723 ECDPQARRIRLGVKQLSDNPWQVFANAYGVGSTVEGEVSSVTDFGIFVRVPGGVEGLVRK 782 Query: 481 SEASRDRVEDATLVLS---VGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQ 537 +R D L VGD V+A ++ K+R ++ SVR ++D ++ Sbjct: 783 QHLVENRDGDPGEALRKYAVGDRVKAVIVDMNVKDRKVAFSVRDYQRKVQRDELSRYMSA 842 Query: 538 EDANFSNN-AMAEAFKAAKGE 557 + + + + G+ Sbjct: 843 PRGEDEGSFTLGDLMRQTSGK 863 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 101/407 (24%), Positives = 168/407 (41%), Gaps = 51/407 (12%) Query: 157 IKLDQKRNNVVVSRRAVIESE--------NSAERDQLLENLQEGMEVKGIVKNLTDYGAF 208 I + R + R+V E + E + G G V + F Sbjct: 279 IAREAHRRALWGGERSVENQEGKGTPLVPRQLQERYSFEAPEPGSVRMGTVVQVNAGTVF 338 Query: 209 VDLGGV-DGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVS------LGLKQ 261 VD+GG +G + + + GD + V V + +S LGLK Sbjct: 339 VDIGGKSEGRVPVEEF--------EAPPKAGDGVRVYVERVTPYGPELSKTKADRLGLK- 389 Query: 262 LGEDPWVAIAKRYPEGTKLTGRVTNLTDY--GCFVEIEEGVEGLVHVSEMDWTNKNIHPS 319 V + +GT + GR+ LT+ G V++ G+ + +S+ K P Sbjct: 390 ------VKLRDAERDGTPVEGRIVRLTEKKSGFEVDLGAGMMAFLPISQ-SDCQKVDAPE 442 Query: 320 KVVNVGDVVEVMVLDIDEER-----------RRISLGLKQCKANPWQQFAETHNKGDRVE 368 ++ G + + I + + RR L + +A ++F + + D V Sbjct: 443 SLI--GLTSKFYIERISQSKQHRGNDNIVINRRRYLEERARQA--REEFFNSVHIEDSVS 498 Query: 369 GKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERER 428 G +KS T FG FI L GG DGL+H++D+SW KKG I V+++D +R Sbjct: 499 GVVKSFTSFGAFIDL-GGFDGLLHVNDMSWGHVA-RPREFVKKGQTIELKVIRLDQAEKR 556 Query: 429 ISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASR-DR 487 I+L +K DP+ + +V G+VT + GA +ELA+G+EG SE S + Sbjct: 557 INLSLKHFQPDPWLEFENKFGVNDVVKGRVTKIADFGAFIELAEGIEGLAHISEFSWVKK 616 Query: 488 VEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATV 534 + ++ +GDEVE G D + +SL ++ ++ A Sbjct: 617 TSKPSDMVKIGDEVECMILGYDIQAGRVSLGLKQVTANPWEEIEARY 663 >UniRef50_B5YH71 30S ribosomal protein S1 n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YH71_THEYD Length = 534 Score = 473 bits (1217), Expect = e-132, Method: Composition-based stats. Identities = 214/537 (39%), Positives = 321/537 (59%), Gaps = 21/537 (3%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE 61 + L+E SL IE G I++G ++ + D V+VD G K E IP +F + Sbjct: 8 KQELESLYEGSLSHIE--RGEIIKGKIMGVRNDGVIVDVGYKFEGIIPLNEFS-EEELKN 64 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 I+ DE++V ++ ++D G LSR++A + + W L AYE A V I GK KGG Sbjct: 65 IKEADEIEVFIEKIDDAQGIISLSRDRALKIKGWEILMDAYEKALPVEVKITGKTKGGVL 124 Query: 122 VELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRN----------NVVVSRR 171 GI F+P SL+++R ++ GK + K+ K++ +N ++++SR+ Sbjct: 125 TSFYGINGFIPASLLEIRKPKNLDEYVGKTFKVKIEKIEPPKNLYGQWRNLKTSLILSRK 184 Query: 172 AVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHP 231 A ++ E + ++ E ++EG+++KG VKN+T+YG FVDLGG+DG LHI+D++W +V+HP Sbjct: 185 AYLQEEKEKMKKEISEKIKEGLKIKGTVKNITNYGVFVDLGGLDGFLHISDISWGKVRHP 244 Query: 232 SEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYG 291 S+ +G E VLK D E R++LG KQ DPW I K+Y G K+ G+VT + D+G Sbjct: 245 SQFFEIGSEYEFIVLKADTENERITLGYKQKKADPWENIDKKYHPGMKVRGKVTRVEDFG 304 Query: 292 CFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKA 351 FVE+EEGVEGLVHVSE+DW HP+ V + + V VLDID E R+ISL KQ K Sbjct: 305 LFVELEEGVEGLVHVSELDWIAP-KHPTYYAEVDEWINVKVLDIDRENRKISLSFKQLKP 363 Query: 352 NPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKK 411 PW+ A+ + GDR+ GK+K+ITDFGIF+ L G+DGL+H+SDISW + + +KK Sbjct: 364 KPWEVVAKKYKVGDRISGKVKTITDFGIFVRLPEGVDGLIHISDISWTKHIDHPSQIFKK 423 Query: 412 GDEIAAVVLQVDAERERISLGVKQLAEDPF-NNWVALNKKGAIVTGKVTAVDAKGATVEL 470 G ++ AV+L ++ E+E++SLG+KQL+EDP+ K G I KV G V++ Sbjct: 424 GQKVDAVILSLEPEKEKLSLGIKQLSEDPWIKEIPEKFKIGEIYNAKVIKKTEHGLFVDI 483 Query: 471 ADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADE 527 VEG + SE ++R + GDE++ VD++ R I LS++ DE +E Sbjct: 484 EGIVEGLVYNSEIDKNR------TVKEGDEIKVIVVKVDKEKRKIGLSMKKIDENEE 534 Score = 267 bits (683), Expect = 7e-70, Method: Composition-based stats. Identities = 117/463 (25%), Positives = 214/463 (46%), Gaps = 26/463 (5%) Query: 87 EKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRPVRDTL 145 EK + + E E + G I G G V++ +P + +++ Sbjct: 7 EKQELESLYEGSLSHIERGEIIKGKIMGVRNDGVIVDVGYKFEGIIPLNEFSEEELKNIK 66 Query: 146 HLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDY 205 E+E + K+D + + +SR + + L++ ++ + V+ + T Sbjct: 67 EA--DEIEVFIEKIDDAQGIISLSRDRAL---KIKGWEILMDAYEKALPVEVKITGKTKG 121 Query: 206 GAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERT----------RV 255 G G++G + + + ++ K+ E VG VK+ K + + + Sbjct: 122 GVLTSFYGINGFIPASLLEIRKPKNLDEY--VGKTFKVKIEKIEPPKNLYGQWRNLKTSL 179 Query: 256 SLGLKQLGEDPWVAIAKRY----PEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDW 311 L K ++ + K EG K+ G V N+T+YG FV++ G++G +H+S++ W Sbjct: 180 ILSRKAYLQEEKEKMKKEISEKIKEGLKIKGTVKNITNYGVFVDLG-GLDGFLHISDISW 238 Query: 312 TNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKI 371 K HPS+ +G E +VL D E RI+LG KQ KA+PW+ + ++ G +V GK+ Sbjct: 239 G-KVRHPSQFFEIGSEYEFIVLKADTENERITLGYKQKKADPWENIDKKYHPGMKVRGKV 297 Query: 372 KSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISL 431 + DFG+F+ L+ G++GLVH+S++ W +A + + + I VL +D E +ISL Sbjct: 298 TRVEDFGLFVELEEGVEGLVHVSELDW-IAPKHPTYYAEVDEWINVKVLDIDRENRKISL 356 Query: 432 GVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEAS-RDRVED 490 KQL P+ K G ++GKV + G V L +GV+G + S+ S ++ Sbjct: 357 SFKQLKPKPWEVVAKKYKVGDRISGKVKTITDFGIFVRLPEGVDGLIHISDISWTKHIDH 416 Query: 491 ATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIAT 533 + + G +V+A ++ + +SL ++ E I Sbjct: 417 PSQIFKKGQKVDAVILSLEPEKEKLSLGIKQLSEDPWIKEIPE 459 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 100/380 (26%), Positives = 173/380 (45%), Gaps = 26/380 (6%) Query: 175 ESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSE 233 + E + + L +++ G +KG + + + G VD+G +G++ + + + + +K+ E Sbjct: 8 KQELESLYEGSLSHIERGEIIKGKIMGVRNDGVIVDVGYKFEGIIPLNEFSEEELKNIKE 67 Query: 234 IVNVGDEITVKVLKFDRERTRVSLGL-KQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGC 292 DEI V + K D + +SL + L W + Y + + ++T T G Sbjct: 68 A----DEIEVFIEKIDDAQGIISLSRDRALKIKGWEILMDAYEKALPVEVKITGKTKGGV 123 Query: 293 FVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERR----------RI 342 G+ G + S + K + + V G +V + I+ + + Sbjct: 124 LTSFY-GINGFIPAS-LLEIRKPKNLDEYV--GKTFKVKIEKIEPPKNLYGQWRNLKTSL 179 Query: 343 SLGLKQ----CKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISW 398 L K K ++ +E +G +++G +K+IT++G+F+ L GG+DG +H+SDISW Sbjct: 180 ILSRKAYLQEEKEKMKKEISEKIKEGLKIKGTVKNITNYGVFVDL-GGLDGFLHISDISW 238 Query: 399 NVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKV 458 + ++ G E +VL+ D E ERI+LG KQ DP+ N G V GKV Sbjct: 239 GKV-RHPSQFFEIGSEYEFIVLKADTENERITLGYKQKKADPWENIDKKYHPGMKVRGKV 297 Query: 459 TAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLS 518 T V+ G VEL +GVEG + SE + T V + + K +DR+NR ISLS Sbjct: 298 TRVEDFGLFVELEEGVEGLVHVSELDWIAPKHPTYYAEVDEWINVKVLDIDRENRKISLS 357 Query: 519 VRAKDEADEKDAIATVNKQE 538 + + + Sbjct: 358 FKQLKPKPWEVVAKKYKVGD 377 Score = 118 bits (297), Expect = 4e-25, Method: Composition-based stats. Identities = 59/294 (20%), Positives = 110/294 (37%), Gaps = 25/294 (8%) Query: 256 SLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKN 315 L KQ E + G + G++ + + G V++ EG++ ++E Sbjct: 4 QLSEKQELESLYEGSLSHIERGEIIKGKIMGVRNDGVIVDVGYKFEGIIPLNEFSEEE-- 61 Query: 316 IHPSKVVNVGDVVEVMVLDIDEERRRISLGL-KQCKANPWQQFAETHNKGDRVEGKIKSI 374 K + D +EV + ID+ + ISL + K W+ + + K VE KI Sbjct: 62 ---LKNIKEADEIEVFIEKIDDAQGIISLSRDRALKIKGWEILMDAYEKALPVEVKITGK 118 Query: 375 TDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERE------- 427 T G+ GI+G + S + + + + EY G + +++ + Sbjct: 119 TKGGVLTSF-YGINGFIPASLL--EIRKPKNLDEY-VGKTFKVKIEKIEPPKNLYGQWRN 174 Query: 428 ---RISLGVKQLAE----DPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRA 480 + L K + K+G + G V + G V+L G++G+L Sbjct: 175 LKTSLILSRKAYLQEEKEKMKKEISEKIKEGLKIKGTVKNITNYGVFVDLG-GLDGFLHI 233 Query: 481 SEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATV 534 S+ S +V + +G E E D +N I+L + K ++ Sbjct: 234 SDISWGKVRHPSQFFEIGSEYEFIVLKADTENERITLGYKQKKADPWENIDKKY 287 >UniRef50_Q0EYT6 Ribosomal protein S1 n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EYT6_9PROT Length = 621 Score = 472 bits (1216), Expect = e-131, Method: Composition-based stats. Identities = 229/554 (41%), Positives = 335/554 (60%), Gaps = 8/554 (1%) Query: 2 TESFAQLFEESLKEI-ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL 60 +SF L+E SLKE E R G +V G+VV ++ DVV++D G K+E IP +F+ A G Sbjct: 70 EDSFRLLYEASLKEKGEIRKGEMVTGMVVGLNADVVVIDVGTKAEGTIPLAEFEQA-GLP 128 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 +G E+ + +V G LS ++ EAW +E A D TV VI +VKGG+ Sbjct: 129 VPAIGTEIKALIQSVGGSSG-VSLSVLAIRQREAWDAIEAAVADESTVDAVITSEVKGGY 187 Query: 121 TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 V L+G+ AF+P S D +L GK + V++ ++ N+VVSRR + + Sbjct: 188 RVSLSGLNAFMPRSEADTDIHVLPANLIGKACKVAVLEARRRPENIVVSRRRPLTAALEV 247 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 ER G + G VK L D+GAFVD+GGVD LLH++D++W+R+KHPSE+++VG Sbjct: 248 ERAAFFAQHAVGDRLSGEVKRLADFGAFVDIGGVDALLHVSDVSWRRIKHPSEMLSVGQS 307 Query: 241 ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV 300 ++V+++K + E +VS+ +K L DPW + Y G LTG V L D+G VE+E G+ Sbjct: 308 VSVEIVKLNAETGKVSVSMKALQSDPWDNVEAIYEPGMGLTGTVRRLLDFGAVVELEPGI 367 Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAET 360 EG++H SE+ WTN++++P+ V+ GDVV+V+VL++D RRI L LK NPWQQ+ Sbjct: 368 EGMIHRSELSWTNRDVNPAAVLAEGDVVDVVVLEVDASARRIRLSLKAVSENPWQQWMAD 427 Query: 361 HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL 420 H G V GKIK+ITDFG F+ + G+DGLVH+ ++SW +G A+ Y KG E+ AVVL Sbjct: 428 HPIGTHVSGKIKNITDFGFFVHVADGMDGLVHMENLSWEKSGAAAMEPYSKGQEVEAVVL 487 Query: 421 QVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRA 480 VD E++RI+LG+KQL+ DPF ++A K+G V G V V G VELADGV+ ++ Sbjct: 488 GVDVEKQRIALGIKQLSADPFELFLAGVKRGNSVNGTVVDVKPAGVVVELADGVQAFMPM 547 Query: 481 SEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDA 540 E RD E L VG EVEAK V+ K R ++LS+R +E++A+ ++Q Sbjct: 548 REVPRDHGE-----LKVGSEVEAKIVEVNNKRRQVTLSIRQHLIQEEREAMRNYSRQTAE 602 Query: 541 NFSNNAMAEAFKAA 554 + +A+A + Sbjct: 603 ESAPSALALELQRK 616 >UniRef50_B3TCT6 Putative S1 RNA binding domain protein n=2 Tax=root RepID=B3TCT6_9BACT Length = 571 Score = 463 bits (1192), Expect = e-129, Method: Composition-based stats. Identities = 203/551 (36%), Positives = 340/551 (61%), Gaps = 4/551 (0%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEI 62 + F +L + + + G I GVV + K+ + VD GLKSE AIP E+FK + +I Sbjct: 14 KEFEKLLSQDWGNRKFKEGEITTGVVSKVGKNFIFVDLGLKSEGAIPVEEFKLTKEIDKI 73 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 ++G +++V L+ +E+ G ++SREKA++ +W +EKA+E+ E +TGVI K KGGF V Sbjct: 74 EIGSKIEVLLEKIENKTGNVVISREKARKAHSWKKMEKAFENQEKITGVIISKCKGGFIV 133 Query: 123 ELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 ++ FLPGS +D++P+++ HL F+ +KLD++R N+V+SRRA++E +R Sbjct: 134 DVESCLCFLPGSQIDLKPLKNFDHLMKVPQTFECVKLDKRRGNIVLSRRAILEKILVRDR 193 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 D+++ L+EG V G +KNLT++GAFVDL GVD LLHITD++W+R+ P++++++G I Sbjct: 194 DKIISKLKEGDIVSGTIKNLTEWGAFVDLNGVDALLHITDISWRRINKPADLLSIGQSIK 253 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 K++K + ++SLG+KQL EDP+ + Y G T +TN+ DYGCF ++EEG+EG Sbjct: 254 AKIIKIEEGTKKISLGVKQLTEDPYKKVIDSYEVGKNYTAIITNVQDYGCFAKLEEGLEG 313 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHN 362 L+H SE+ WT KNIHP KV++ ++V +L+ D E+RR+SL K NPW +F + H Sbjct: 314 LIHQSELSWTKKNIHPGKVLSTSQKIQVQILEKDMEKRRLSLSYKNTLVNPWVKFTKNHK 373 Query: 363 KGDRVEGKIKSITDFGIFIGL-DGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQ 421 G+ EG +K+ITD+G+FI + D +DG++H D++W+ E + +YKK I +L+ Sbjct: 374 VGNEAEGVVKNITDYGLFISVKDSELDGMIHYKDLNWSEK-ESELEKYKKNQLIKFKILE 432 Query: 422 VDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELAD-GVEGYLRA 480 ++ E+E+I LG+KQL +DPF ++ +VT V + G V + + ++ Sbjct: 433 INQEKEKIRLGIKQLTQDPFKFFMNKKIS-DVVTAIVVSSSNDGIHVYAGNKDLLLLIKR 491 Query: 481 SEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDA 540 S+ +++ + GD V+ +D++NR + LS++ +E ++K I ++ Sbjct: 492 SQLAKEPENQRPSRWARGDRVDCMIIELDKENRKVVLSIKVLEEQEQKITIKKFGSKDSG 551 Query: 541 NFSNNAMAEAF 551 ++ + Sbjct: 552 GTLSDILGPLL 562 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 95/450 (21%), Positives = 210/450 (46%), Gaps = 14/450 (3%) Query: 85 SREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRPVRD 143 S ++ ++ + + +++ E TGV++ K V+L +P + D Sbjct: 12 SHKEFEKLLSQDWGNRKFKEGEITTGVVSKVGKNFIFVDLGLKSEGAIPVEEFKLTKEID 71 Query: 144 TLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLT 203 + G ++E + K++ K NVV+SR ++ + + ++ EN + ++ G++ + Sbjct: 72 KIE-IGSKIEVLLEKIENKTGNVVISREKARKAHSWKKMEKAFENQE---KITGVIISKC 127 Query: 204 DYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLG 263 G VD+ L + + K +K+ ++ V +K D+ R + L + + Sbjct: 128 KGGFIVDVESCLCFLPGSQIDLKPLKNFDHLMKVPQTFEC--VKLDKRRGNIVLSRRAIL 185 Query: 264 EDPW----VAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPS 319 E I + EG ++G + NLT++G FV++ GV+ L+H++++ W N P+ Sbjct: 186 EKILVRDRDKIISKLKEGDIVSGTIKNLTEWGAFVDL-NGVDALLHITDISWRRIN-KPA 243 Query: 320 KVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGI 379 ++++G ++ ++ I+E ++ISLG+KQ +P+++ +++ G I ++ D+G Sbjct: 244 DLLSIGQSIKAKIIKIEEGTKKISLGVKQLTEDPYKKVIDSYEVGKNYTAIITNVQDYGC 303 Query: 380 FIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAED 439 F L+ G++GL+H S++SW + +I +L+ D E+ R+SL K + Sbjct: 304 FAKLEEGLEGLIHQSELSWTKKNIHPGKVLSTSQKIQVQILEKDMEKRRLSLSYKNTLVN 363 Query: 440 PFNNWVALNKKGAIVTGKVTAVDAKGATVELADG-VEGYLRASEASRDRVEDATLVLSVG 498 P+ + +K G G V + G + + D ++G + + + E Sbjct: 364 PWVKFTKNHKVGNEAEGVVKNITDYGLFISVKDSELDGMIHYKDLNWSEKESELEKYKKN 423 Query: 499 DEVEAKFTGVDRKNRAISLSVRAKDEADEK 528 ++ K ++++ I L ++ + K Sbjct: 424 QLIKFKILEINQEKEKIRLGIKQLTQDPFK 453 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 88/359 (24%), Positives = 160/359 (44%), Gaps = 20/359 (5%) Query: 171 RAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVK 229 ++ E E +D +EG G+V + FVDLG +G + + + ++ Sbjct: 11 KSHKEFEKLLSQDWGNRKFKEGEITTGVVSKVGKNFIFVDLGLKSEGAIPVEEF---KLT 67 Query: 230 HPSEIVNVGDEITVKVLKFDRERTRVSLGL-KQLGEDPWVAIAKRYPEGTKLTGRVTNLT 288 + + +G +I V + K + + V + K W + K + K+TG + + Sbjct: 68 KEIDKIEIGSKIEVLLEKIENKTGNVVISREKARKAHSWKKMEKAFENQEKITGVIISKC 127 Query: 289 DYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVV--EVMVLDIDEERRRISLGL 346 G V++E + + S++D + P K + V + +D+ R I L Sbjct: 128 KGGFIVDVESCL-CFLPGSQID-----LKPLKNFDHLMKVPQTFECVKLDKRRGNIVLSR 181 Query: 347 KQCKAN----PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAG 402 + + +GD V G IK++T++G F+ L G+D L+H++DISW Sbjct: 182 RAILEKILVRDRDKIISKLKEGDIVSGTIKNLTEWGAFVDL-NGVDALLHITDISWRRIN 240 Query: 403 EEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVD 462 + G I A +++++ ++ISLGVKQL EDP+ + + G T +T V Sbjct: 241 K-PADLLSIGQSIKAKIIKIEEGTKKISLGVKQLTEDPYKKVIDSYEVGKNYTAIITNVQ 299 Query: 463 AKGATVELADGVEGYLRASEASRDRVE-DATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 G +L +G+EG + SE S + VLS +++ + D + R +SLS + Sbjct: 300 DYGCFAKLEEGLEGLIHQSELSWTKKNIHPGKVLSTSQKIQVQILEKDMEKRRLSLSYK 358 >UniRef50_B0SDL5 30S Ribosomal protein S1 n=6 Tax=Leptospira RepID=B0SDL5_LEPBA Length = 566 Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats. Identities = 190/546 (34%), Positives = 309/546 (56%), Gaps = 17/546 (3%) Query: 2 TESFAQLFEESLKEIETR-------PGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK 54 T SF +L E+ + + + G+++ G VV + D V +D G K E+ + E F Sbjct: 13 TTSFGELLEKWESQSQAQEQENSAGKGTLIEGTVVDVIGDTVFLDIGEKLEARVSREDFS 72 Query: 55 NAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVING 114 + G++V + D G +LS+++A + W T++ A ++ ++G I G Sbjct: 73 E-----TPKRGEKVSAIIKKRVD--GYCVLSKKEADQRVGWETIKDASQNGYPLSGKIVG 125 Query: 115 KVK-GGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAV 173 +VK G+ VE GI+ FLP S V VR T GKE FK+I+L++K VVSR+ + Sbjct: 126 EVKNKGYLVESEGIQLFLPASHVGVRFKESTEG--GKEFSFKIIELNEKTRTGVVSRKTL 183 Query: 174 IESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSE 233 ++ N + ++LL ++ G +V G V + ++G F+ + V GLL D+++K+ + Sbjct: 184 LDEINGEKWEELLGKVKVGDKVNGKVVKIANFGVFLSVYDVVGLLRQNDISYKKFAPFKQ 243 Query: 234 IVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCF 293 N+G E+ V VL+ D+E ++SLG+KQL EDPW K +G + G VT+LT++G F Sbjct: 244 YFNIGAEVEVIVLEVDKENNKLSLGIKQLYEDPWAWAKKELEKGMVVRGIVTSLTNFGAF 303 Query: 294 VEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP 353 VE++EG+EGL+H +E+ W K HP V+ G V+ +LDID E RR+SLGLKQ NP Sbjct: 304 VELKEGLEGLIHTTELSWAKKPPHPKDVLKKGQEVDSEILDIDFEARRLSLGLKQLLPNP 363 Query: 354 WQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGD 413 W+ + G+ +EGKI IT +G F+ ++ GI+GL+H+SDI+W+ + + KKG Sbjct: 364 WEALSANVRAGNVLEGKITGITKYGAFVEVESGIEGLIHISDITWDEKEKNPLNLLKKGQ 423 Query: 414 EIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADG 473 + +L V+ + +RIS G+KQL+E P+ G +V G+V ++ + G VE+ G Sbjct: 424 SVQYKILDVNLDAQRISCGLKQLSEHPYEALRKKYPPGTLVEGRVKSIVSFGVFVEVEPG 483 Query: 474 VEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIAT 533 EG + SE R + VGD V ++ N+ ISLS++ D+A E++ +A Sbjct: 484 YEGLVHISEIPDGRNIKLEDLYKVGDSVRTVVVKIEPNNKKISLSIKDFDKAVEREEMAK 543 Query: 534 VNKQED 539 K+++ Sbjct: 544 YMKEDN 549 >UniRef50_Q027A8 SSU ribosomal protein S1P n=2 Tax=Acidobacteria RepID=Q027A8_SOLUE Length = 572 Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats. Identities = 208/550 (37%), Positives = 309/550 (56%), Gaps = 38/550 (6%) Query: 2 TESFAQLF---EESLKEIETRPGSI-VRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ 57 ESF + E+S T PG + G VVAI + L+D G K+E IP F++ Sbjct: 24 NESFGDILTQYEQSHTHRITEPGKKGLEGTVVAITAEAALLDIGFKTEGIIPLTDFQSTG 83 Query: 58 GELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVK 117 ++VGD++ V++ D G LSR K +R + W LEKA+ + + G I VK Sbjct: 84 D--TVKVGDKLPVSI-KGRDPEGYYELSRLKVERPKDWSALEKAFAEKAAILGTITAVVK 140 Query: 118 GGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESE 177 GG +V++ G+RAF+P S R + L G+E+ ++IKLD ++VV RRAV+E E Sbjct: 141 GGVSVDV-GVRAFMPASRSGARDAAEMEKLVGQEIRCRIIKLDVADEDLVVDRRAVLEEE 199 Query: 178 NSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNV 237 A ++Q ++EG V G +++LTDYGAFVD+GGVD LLH+ D++W RV P++++NV Sbjct: 200 ERASKEQRYSQVKEGEIVHGTIRSLTDYGAFVDIGGVDALLHVADISWGRVNKPADVLNV 259 Query: 238 GDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE 297 GD++ K+LK D + R+SLGLKQL PW +A +Y G ++TG VT +TD+G FVE+E Sbjct: 260 GDKVEAKILKVDPAKKRISLGLKQLQPHPWDLVADKYKVGERVTGSVTRVTDFGAFVELE 319 Query: 298 EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQF 357 +G+EGLVH+SEM W+ K P+ +V GD VEV+VL ++ RRISLGLKQ +PW Sbjct: 320 KGIEGLVHLSEMSWSKKIRRPADMVKPGDQVEVVVLGVNAADRRISLGLKQALGDPWADA 379 Query: 358 AETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAA 417 A+ G +EG + SI FG F+ + G++G+VH+ DIS K G + A Sbjct: 380 AQKLAVGTVIEGPVTSIQKFGAFVQVAEGVEGMVHVGDISAEKRINHPQDVVKVGQVVKA 439 Query: 418 VVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGY 477 VL++D E+ R+ LG+KQL + ++A +K+G +VTG++T V + A VEL +GV Sbjct: 440 QVLELDVEKRRLRLGMKQLIPTSLDEYIAEHKEGDVVTGRMTDVSSGRAKVELGEGVHAT 499 Query: 478 LRASEASRDRVEDATLVLSV------------------------------GDEVEAKFTG 507 R + S + E+ V G + T Sbjct: 500 CRLAAESAPKEEEKAGPDKVDLGSLTSMLQARWKSGQGGGGAGKPEGPRSGQIRSFRITR 559 Query: 508 VDRKNRAISL 517 +D ++ I L Sbjct: 560 LDAASKKIEL 569 Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats. Identities = 125/440 (28%), Positives = 216/440 (49%), Gaps = 18/440 (4%) Query: 105 AETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKR 163 + + G + +++ +P L D + DT+ G +L + D + Sbjct: 47 KKGLEGTVVAITAEAALLDIGFKTEGIIP--LTDFQSTGDTVK-VGDKLPVSIKGRDPEG 103 Query: 164 NNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDM 223 + ++ E + L + E + G + + G VD+ GV + + Sbjct: 104 ----YYELSRLKVERPKDWSALEKAFAEKAAILGTITAVVKGGVSVDV-GVRAFMPASRS 158 Query: 224 AWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGED----PWVAIAKRYPEGTK 279 + ++ VG EI +++K D + + + + E+ + EG Sbjct: 159 GARDAAEMEKL--VGQEIRCRIIKLDVADEDLVVDRRAVLEEEERASKEQRYSQVKEGEI 216 Query: 280 LTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEER 339 + G + +LTDYG FV+I GV+ L+HV+++ W N P+ V+NVGD VE +L +D + Sbjct: 217 VHGTIRSLTDYGAFVDIG-GVDALLHVADISWGRVN-KPADVLNVGDKVEAKILKVDPAK 274 Query: 340 RRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWN 399 +RISLGLKQ + +PW A+ + G+RV G + +TDFG F+ L+ GI+GLVHLS++SW+ Sbjct: 275 KRISLGLKQLQPHPWDLVADKYKVGERVTGSVTRVTDFGAFVELEKGIEGLVHLSEMSWS 334 Query: 400 VAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVT 459 K GD++ VVL V+A RISLG+KQ DP+ + G ++ G VT Sbjct: 335 KKIRRPADMVKPGDQVEVVVLGVNAADRRISLGLKQALGDPWADAAQKLAVGTVIEGPVT 394 Query: 460 AVDAKGATVELADGVEGYLRASEASRD-RVEDATLVLSVGDEVEAKFTGVDRKNRAISLS 518 ++ GA V++A+GVEG + + S + R+ V+ VG V+A+ +D + R + L Sbjct: 395 SIQKFGAFVQVAEGVEGMVHVGDISAEKRINHPQDVVKVGQVVKAQVLELDVEKRRLRLG 454 Query: 519 VRAKDEADEKDAIATVNKQE 538 ++ + IA + + Sbjct: 455 MKQLIPTSLDEYIAEHKEGD 474 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 65/274 (23%), Positives = 111/274 (40%), Gaps = 18/274 (6%) Query: 275 PEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLD 334 P L G V +T ++I EG++ +++ T V VGD + V + Sbjct: 45 PGKKGLEGTVVAITAEAALLDIGFKTEGIIPLTDFQST------GDTVKVGDKLPVSIKG 98 Query: 335 IDEERRRISLG-LKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHL 393 D E L LK + W + + + G I ++ G + +D G+ + Sbjct: 99 RDPE-GYYELSRLKVERPKDWSALEKAFAEKAAILGTITAVVKGG--VSVDVGVRAFMPA 155 Query: 394 SDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDP----FNNWVALNK 449 S + A + A E G EI ++++D E + + + + E+ + K Sbjct: 156 S---RSGARDAAEMEKLVGQEIRCRIIKLDVADEDLVVDRRAVLEEEERASKEQRYSQVK 212 Query: 450 KGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVD 509 +G IV G + ++ GA V++ GV+ L ++ S RV VL+VGD+VEAK VD Sbjct: 213 EGEIVHGTIRSLTDYGAFVDIG-GVDALLHVADISWGRVNKPADVLNVGDKVEAKILKVD 271 Query: 510 RKNRAISLSVRAKDEADEKDAIATVNKQEDANFS 543 + ISL ++ E S Sbjct: 272 PAKKRISLGLKQLQPHPWDLVADKYKVGERVTGS 305 >UniRef50_Q1IY12 RNA binding S1 n=9 Tax=Deinococci RepID=Q1IY12_DEIGD Length = 587 Score = 445 bits (1146), Expect = e-123, Method: Composition-based stats. Identities = 170/434 (39%), Positives = 266/434 (61%), Gaps = 6/434 (1%) Query: 8 LFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE-----I 62 L E+ + G IV G VV I ++ + VD G K E IP Q + LE Sbjct: 59 LASEAQEPQTVSRGDIVDGTVVFIGQEGIAVDVGAKVEGIIPLNQIGDEPVTLEQAQQMY 118 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 + GD+++ + V+ + +LS+++A + + W LE+ E E + KV+GG Sbjct: 119 KPGDQIEAYVVRVDLANNQIVLSKKRADQDKGWRVLERMQEQDEAFEVEVLEKVRGGLVA 178 Query: 123 ELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 ++ GIRAFLP S VD R V D GK L K+I+L++KRN V++S RA++E++ + R Sbjct: 179 QVEGIRAFLPASQVDTRRVNDLDPYVGKPLMVKLIELNRKRNRVIISHRAILEAQKAKAR 238 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 +Q + L G + +G V +TD+G FV+LGG+DGL+H +++ + R HP ++V VGD++ Sbjct: 239 EQTIGKLVPGAQFEGEVVEITDFGVFVNLGGIDGLVHRSELTYGRFNHPRDVVKVGDKVQ 298 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 V+V+ D R R++L +K L +DPW ++Y G ++ G+VTNLT++G FVE+E G+EG Sbjct: 299 VQVIDVDEGRERINLSMKSLTQDPWEGAVEKYHIGQRVRGKVTNLTNFGAFVELEPGLEG 358 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHN 362 LVHVSEM WT + HP++V+ GD VE ++L ID + RRISLG++Q +PW + + Sbjct: 359 LVHVSEMSWTKRVRHPNEVLKEGDEVEAVILRIDPKERRISLGIRQTTDDPWSALPDRYP 418 Query: 363 KGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQV 422 G V+GKI +TDFG+F+ ++ GI+GL+H+S++ +KKGDEI AV+L + Sbjct: 419 PGTPVKGKITGMTDFGVFMEIEEGIEGLIHISELDTQRVN-NPADLFKKGDEIEAVILNI 477 Query: 423 DAERERISLGVKQL 436 D +R SL ++ Sbjct: 478 DPVEQRASLSRRRA 491 Score = 330 bits (846), Expect = 1e-88, Method: Composition-based stats. Identities = 125/427 (29%), Positives = 219/427 (51%), Gaps = 16/427 (3%) Query: 105 AETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRPV----RDTLHLEGKELEFKVIKL 159 + V G + + G V++ + +P + + PV ++ G ++E V+++ Sbjct: 72 GDIVDGTVVFIGQEGIAVDVGAKVEGIIPLNQIGDEPVTLEQAQQMYKPGDQIEAYVVRV 131 Query: 160 DQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLH 219 D N +V+S++ + + +++ E + + V G + G+ L Sbjct: 132 DLANNQIVLSKKRADQDKGWRVLERMQEQDEA---FEVEVLEKVRGGLVAQVEGIRAFLP 188 Query: 220 ITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRY----P 275 + + +RV VG + VK+++ +R+R RV + + + E ++ Sbjct: 189 ASQVDTRRVNDLDPY--VGKPLMVKLIELNRKRNRVIISHRAILEAQKAKAREQTIGKLV 246 Query: 276 EGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDI 335 G + G V +TD+G FV + G++GLVH SE+ + N HP VV VGD V+V V+D+ Sbjct: 247 PGAQFEGEVVEITDFGVFVNLG-GIDGLVHRSELTYGRFN-HPRDVVKVGDKVQVQVIDV 304 Query: 336 DEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSD 395 DE R RI+L +K +PW+ E ++ G RV GK+ ++T+FG F+ L+ G++GLVH+S+ Sbjct: 305 DEGRERINLSMKSLTQDPWEGAVEKYHIGQRVRGKVTNLTNFGAFVELEPGLEGLVHVSE 364 Query: 396 ISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVT 455 +SW K+GDE+ AV+L++D + RISLG++Q +DP++ G V Sbjct: 365 MSWTKRVRHPNEVLKEGDEVEAVILRIDPKERRISLGIRQTTDDPWSALPDRYPPGTPVK 424 Query: 456 GKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAI 515 GK+T + G +E+ +G+EG + SE RV + + GDE+EA +D + Sbjct: 425 GKITGMTDFGVFMEIEEGIEGLIHISELDTQRVNNPADLFKKGDEIEAVILNIDPVEQRA 484 Query: 516 SLSVRAK 522 SLS R Sbjct: 485 SLSRRRA 491 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 104/357 (29%), Positives = 166/357 (46%), Gaps = 15/357 (4%) Query: 187 ENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRV--KHPSEIVNVGDEITV 243 + + G V G V + G VD+G V+G++ + + + V + ++ GD+I Sbjct: 67 QTVSRGDIVDGTVVFIGQEGIAVDVGAKVEGIIPLNQIGDEPVTLEQAQQMYKPGDQIEA 126 Query: 244 KVLKFDRERTRVSLGLKQLGED-PWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 V++ D ++ L K+ +D W + + + V G ++E G+ Sbjct: 127 YVVRVDLANNQIVLSKKRADQDKGWRVLERMQEQDEAFEVEVLEKVRGGLVAQVE-GIRA 185 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC----KANPWQQFA 358 + S++D N V G + V +++++ +R R+ + + KA +Q Sbjct: 186 FLPASQVDTRRVNDLDPYV---GKPLMVKLIELNRKRNRVIISHRAILEAQKAKAREQTI 242 Query: 359 ETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAV 418 G + EG++ ITDFG+F+ L GGIDGLVH S++++ K GD++ Sbjct: 243 GKLVPGAQFEGEVVEITDFGVFVNL-GGIDGLVHRSELTYGRFN-HPRDVVKVGDKVQVQ 300 Query: 419 VLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYL 478 V+ VD RERI+L +K L +DP+ V G V GKVT + GA VEL G+EG + Sbjct: 301 VIDVDEGRERINLSMKSLTQDPWEGAVEKYHIGQRVRGKVTNLTNFGAFVELEPGLEGLV 360 Query: 479 RASEAS-RDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATV 534 SE S RV VL GDEVEA +D K R ISL +R + Sbjct: 361 HVSEMSWTKRVRHPNEVLKEGDEVEAVILRIDPKERRISLGIRQTTDDPWSALPDRY 417 Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 2/97 (2%) Query: 446 ALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRV--EDATLVLSVGDEVEA 503 +G IV G V + +G V++ VEG + ++ + V E A + GD++EA Sbjct: 67 QTVSRGDIVDGTVVFIGQEGIAVDVGAKVEGIIPLNQIGDEPVTLEQAQQMYKPGDQIEA 126 Query: 504 KFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDA 540 VD N I LS + D+ + + +Q++A Sbjct: 127 YVVRVDLANNQIVLSKKRADQDKGWRVLERMQEQDEA 163 >UniRef50_C1SLB2 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SSU ribosomal protein S1P n=2 Tax=Bacteria RepID=C1SLB2_9BACT Length = 848 Score = 434 bits (1116), Expect = e-120, Method: Composition-based stats. Identities = 195/555 (35%), Positives = 304/555 (54%), Gaps = 9/555 (1%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE 61 E F + EES ++ E SIV+G V I+++ VLV+ G K+E +P+ +F GE+ Sbjct: 297 MEDFEAMLEESFQQPE--KNSIVQGTVAQINENDVLVNIGFKTEGVVPSAEFM-KDGEIT 353 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 I+VGDEVDV + G G LSR+ ++ WI +EKA E+ V + V GFT Sbjct: 354 IKVGDEVDVLFLGIAGGGGYVKLSRKAIEKEADWIEVEKALEEETPVEIKVTSVVDKGFT 413 Query: 122 VELNGIRAFLPGSLVDVRPVR-DTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 + I F+P + +D + + G E KV+K ++K+ + + SR+ + Sbjct: 414 GKCGEIECFIPENHIDFKNSTMEPQEYVGNIYEVKVLKANKKQRSFLASRKLQMIQSIEK 473 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 E+ + ++EG +KG VK + YGAF++ G VDG L ++AW VKHP++ + GDE Sbjct: 474 EKKEFFSQIEEGQILKGSVKTIKHYGAFMNFGAVDGFLRKNNIAWGVVKHPNQYIEEGDE 533 Query: 241 ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV 300 + VK+L D E ++ +GLKQ+ EDPW + +YPEG + G V + G +EIE+G+ Sbjct: 534 LEVKILNIDFEEEKLEVGLKQMQEDPWDSAYDKYPEGGTVAGTVVARKNKGFVMEIEQGI 593 Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAET 360 +G + + E+ W + + D VE ++ ID+E++++ + LK + NPW Sbjct: 594 DGFIPLEEISWLK---NARIAIEPKDAVEGKIIGIDDEKKKLIVSLKSIQENPWVTLKTK 650 Query: 361 HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL 420 H +G ++G IKSITDFGIF+ +DGL+ DISW E YK+GDEI A VL Sbjct: 651 HPEGSAIKGTIKSITDFGIFVDFGEFLDGLIRKKDISWTDEPENLDELYKEGDEIEAKVL 710 Query: 421 QVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRA 480 ++DAE+ERISLGVKQL +P+ L G +V KV AV +G VEL + G++ Sbjct: 711 KIDAEKERISLGVKQLETNPWREIGKLLPNGKVVEVKVLAVSKEGLEVELPRDLIGFIPD 770 Query: 481 SEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQED- 539 +E ++V D T +VGD ++A D + + I LS+R + EK + K+ Sbjct: 771 NELDVEKV-DPTDKFAVGDTIKAVVFRNDAREKKILLSIRRYMQDSEKREVKEYLKKLAQ 829 Query: 540 ANFSNNAMAEAFKAA 554 ++ S ++ K Sbjct: 830 SDDSTFSLGNILKGK 844 >UniRef50_Q3YRK4 SSU ribosomal protein S1P n=21 Tax=Rickettsiales RepID=Q3YRK4_EHRCJ Length = 567 Score = 434 bits (1116), Expect = e-120, Method: Composition-based stats. Identities = 203/528 (38%), Positives = 317/528 (60%), Gaps = 16/528 (3%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE 61 + F +E + + + G I+ G +V IDK V +D+GLKSES + ++F+ Sbjct: 42 SSEFQNALKEFIDD-SVKEGQIIEGTIVCIDKGYVTIDSGLKSESIVSLKEFELGDDYQN 100 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 I +G +V + L+ +E G +LSREKA R E W LE+A E E V GVI +K G+T Sbjct: 101 IGIGSKVKLYLEKIEGRNGSVVLSREKAIRDELWQKLEEAAERKEDVEGVIFSSIKCGYT 160 Query: 122 VELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 V++ G+ AFLP S V +R V+D L GK+ +F+++K+D K+ N+VVSR+A++E + Sbjct: 161 VDIKGVVAFLPASHVALRQVKDITPLLGKKQKFRILKMDNKQGNIVVSRKAILEESLADA 220 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDL------GGVDGLLHITDMAWKRVKHPSEIV 235 + L L EG ++G VK++T YG F+++ G VDGLLHITD++W RV HPS + Sbjct: 221 KSLYLSQLNEGDIIEGKVKSITKYGVFIEIHESPSVGVVDGLLHITDISWSRVSHPSAVF 280 Query: 236 NVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVE 295 + G + K++K DRE ++SLG+KQL E PW I K+YP + G VT++ DYG FVE Sbjct: 281 SCGQTVKTKIIKIDRENKKISLGVKQLEESPWSNIEKKYPVDSIHKGIVTSIEDYGVFVE 340 Query: 296 IEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQ 355 +E G+EGLVHVSE+ WT ++ +++ G+ ++V VL ID + R+SL +K+C+ NPWQ Sbjct: 341 LETGIEGLVHVSEVSWTKNSLPINQLFMRGEEIQVKVLSIDTAKSRMSLSMKRCQENPWQ 400 Query: 356 QFAETHNKGDRVEGKIKSITDFGIFIGLD-----GGIDGLVHLSDISWNVAGEEAVREYK 410 F + G V KIK+IT+ GIF+ + GI+GL+ +++SW+++ E AV++Y Sbjct: 401 AFTLKYPLGSVVSTKIKNITNLGIFVSFEDNTLNDGIEGLIRTTELSWSLSPEAAVKKYS 460 Query: 411 KGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVD-AKGATVE 469 GD + A +L ++ + +I LGVKQL DPF + + G + VT V G V+ Sbjct: 461 IGDSVEAKILMINPNKSKIDLGVKQLEYDPFLDLLKKTNLGDKIPVTVTKVVEDTGILVD 520 Query: 470 LADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISL 517 + +G + E ++ + D GD++EA+ ++ N +SL Sbjct: 521 VFNGSNSFNLLIE--QEYLPDNKKFF-PGDKLEAEVLLIETYNMVLSL 565 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 127/482 (26%), Positives = 237/482 (49%), Gaps = 37/482 (7%) Query: 91 RHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHL--- 147 ++ ++ + ++ + + G I KG T++ S+V ++ Sbjct: 46 QNALKEFIDDSVKEGQIIEGTIVCIDKGYVTID----SGLKSESIVSLKEFELGDDYQNI 101 Query: 148 -EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGME----VKGIVKNL 202 G +++ + K++ + +VV+SR I RD+L + L+E E V+G++ + Sbjct: 102 GIGSKVKLYLEKIEGRNGSVVLSREKAI-------RDELWQKLEEAAERKEDVEGVIFSS 154 Query: 203 TDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQL 262 G VD+ GV L + +A ++VK + ++ G + ++LK D ++ + + K + Sbjct: 155 IKCGYTVDIKGVVAFLPASHVALRQVKDITPLL--GKKQKFRILKMDNKQGNIVVSRKAI 212 Query: 263 GEDPWVAIAKRY----PEGTKLTGRVTNLTDYGCFVEIEEG-----VEGLVHVSEMDWTN 313 E+ Y EG + G+V ++T YG F+EI E V+GL+H++++ W+ Sbjct: 213 LEESLADAKSLYLSQLNEGDIIEGKVKSITKYGVFIEIHESPSVGVVDGLLHITDISWS- 271 Query: 314 KNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKS 373 + HPS V + G V+ ++ ID E ++ISLG+KQ + +PW + + +G + S Sbjct: 272 RVSHPSAVFSCGQTVKTKIIKIDRENKKISLGVKQLEESPWSNIEKKYPVDSIHKGIVTS 331 Query: 374 ITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGV 433 I D+G+F+ L+ GI+GLVH+S++SW + + +G+EI VL +D + R+SL + Sbjct: 332 IEDYGVFVELETGIEGLVHVSEVSWTKNSLPINQLFMRGEEIQVKVLSIDTAKSRMSLSM 391 Query: 434 KQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVE-----LADGVEGYLRASEASRD-R 487 K+ E+P+ + G++V+ K+ + G V L DG+EG +R +E S Sbjct: 392 KRCQENPWQAFTLKYPLGSVVSTKIKNITNLGIFVSFEDNTLNDGIEGLIRTTELSWSLS 451 Query: 488 VEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAM 547 E A S+GD VEAK ++ I L V+ + D + N + + + Sbjct: 452 PEAAVKKYSIGDSVEAKILMINPNKSKIDLGVKQLEYDPFLDLLKKTNLGDKIPVTVTKV 511 Query: 548 AE 549 E Sbjct: 512 VE 513 Score = 198 bits (503), Expect = 6e-49, Method: Composition-based stats. Identities = 89/373 (23%), Positives = 173/373 (46%), Gaps = 24/373 (6%) Query: 176 SENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIV 235 +A ++ + ++++EG ++G + + +D GL + ++ K + + Sbjct: 44 EFQNALKEFIDDSVKEGQIIEGTIVCIDKGYVTID----SGLKSESIVSLKEFELGDDYQ 99 Query: 236 NVG--DEITVKVLKFDRERTRVSLGL-KQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGC 292 N+G ++ + + K + V L K + ++ W + + + G + + G Sbjct: 100 NIGIGSKVKLYLEKIEGRNGSVVLSREKAIRDELWQKLEEAAERKEDVEGVIFSSIKCGY 159 Query: 293 FVEIEEGVEGLVHVSEMDWTN-KNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLK---- 347 V+I+ GV + S + K+I P +G + +L +D ++ I + K Sbjct: 160 TVDIK-GVVAFLPASHVALRQVKDITPL----LGKKQKFRILKMDNKQGNIVVSRKAILE 214 Query: 348 QCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLD-----GGIDGLVHLSDISWNVAG 402 + A+ + N+GD +EGK+KSIT +G+FI + G +DGL+H++DISW+ Sbjct: 215 ESLADAKSLYLSQLNEGDIIEGKVKSITKYGVFIEIHESPSVGVVDGLLHITDISWSRVS 274 Query: 403 EEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVD 462 + G + ++++D E ++ISLGVKQL E P++N +I G VT+++ Sbjct: 275 -HPSAVFSCGQTVKTKIIKIDRENKKISLGVKQLEESPWSNIEKKYPVDSIHKGIVTSIE 333 Query: 463 AKGATVELADGVEGYLRASEASRDRVEDA-TLVLSVGDEVEAKFTGVDRKNRAISLSVRA 521 G VEL G+EG + SE S + + G+E++ K +D +SLS++ Sbjct: 334 DYGVFVELETGIEGLVHVSEVSWTKNSLPINQLFMRGEEIQVKVLSIDTAKSRMSLSMKR 393 Query: 522 KDEADEKDAIATV 534 E + Sbjct: 394 CQENPWQAFTLKY 406 >UniRef50_D0J9D1 30S ribosomal protein S1 n=25 Tax=Bacteria RepID=D0J9D1_BLASP Length = 606 Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 183/531 (34%), Positives = 302/531 (56%), Gaps = 13/531 (2%) Query: 5 FAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQV 64 F +++ E+L +I+ I +G + I + ++VD G K+E AIP +F+ +V Sbjct: 51 FEKIYAETLPKIQEL--EIYQGTITHITEKNLIVDIGFKAEGAIPISEFR---ENFNFKV 105 Query: 65 GDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL 124 G++++V + + D G+ +LS +KAK W + +A+E E + G + + KGG +E+ Sbjct: 106 GEKMEVMVVKM-DYKGQCILSYQKAKIMRNWERINEAHEKGEVILGYVAARTKGGLIIEI 164 Query: 125 NGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQ 184 I FLPGS ++V+PVRD GK +E KV+K++QK NVVVS + +IE + +R + Sbjct: 165 FDIECFLPGSHINVKPVRDYDTYVGKTMEVKVVKINQKTKNVVVSHKILIERDIEEQRKE 224 Query: 185 LLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 ++ L +G ++G +KN+ YGAFVDLGGVD LLHITDM+W + HP+E+V + E+ Sbjct: 225 MISKLDKGQVLEGKIKNILPYGAFVDLGGVDALLHITDMSWPHINHPTEVVQLEQELKFV 284 Query: 245 VLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLV 304 VL D+++ RV LGLKQL PW ++ G K+ G+V+ L DYG FVEI GVE L+ Sbjct: 285 VLGVDKDKNRVQLGLKQLQPHPWNSLDNNLKVGNKVKGKVSVLADYGAFVEIIPGVEALL 344 Query: 305 HVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKG 364 H+SEM W+ V +GD +E ++L ID + R++SL +KQ +PW + G Sbjct: 345 HISEMSWSYDLSSTQDFVQIGDEIEAVILTIDRQERKMSLSVKQLTPDPWIDIQNKYPIG 404 Query: 365 DRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDA 424 + G ++ T+FGI + L+ GI G+++ +D+SW + D++ ++L +D Sbjct: 405 SKHVGIVRKFTNFGISLELEKGISGIIYANDLSWGKKIKHPSEFCNINDKLEVIILALDP 464 Query: 425 ERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVE-LADGVEGYLRASEA 483 + R++LG KQ+ E+P+ + + G+I G + + KGA+V+ L D +E + Sbjct: 465 QTRRLNLGHKQITENPWEKYEKIYYVGSIHNGFIVNLFDKGASVKLLNDQIEDFQEIEAF 524 Query: 484 SRDRV--EDATLVLSVGDEVEAKFTGVDRKNRAISLS----VRAKDEADEK 528 S R + L ++ K +++ + I +S R KD+ EK Sbjct: 525 SPLRFLEKKDGSTLKKEEKSNFKVIEFNKETKKIVVSHTSIYREKDQKKEK 575 Score = 71.9 bits (175), Expect = 6e-11, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 84/206 (40%), Gaps = 11/206 (5%) Query: 347 KQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAV 406 ++ + + + + +G I IT+ + + + +G + +S+ N Sbjct: 48 RKKFEKIYAETLPKIQELEIYQGTITHITEKNLIVDIGFKAEGAIPISEFRENF------ 101 Query: 407 REYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGA 466 +K G+++ +V+++D + + I K + ++KG ++ G V A G Sbjct: 102 -NFKVGEKMEVMVVKMDYKGQCILSYQKAKIMRNWERINEAHEKGEVILGYVAARTKGGL 160 Query: 467 TVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEAD 526 +E+ D +E +L S + V D VG +E K +++K + + +S + E D Sbjct: 161 IIEIFD-IECFLPGSHINVKPVRDYDTY--VGKTMEVKVVKINQKTKNVVVSHKILIERD 217 Query: 527 -EKDAIATVNKQEDANFSNNAMAEAF 551 E+ ++K + + Sbjct: 218 IEEQRKEMISKLDKGQVLEGKIKNIL 243 >UniRef50_D0RRD0 30S ribosomal protein S1 n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RRD0_9RICK Length = 570 Score = 420 bits (1081), Expect = e-116, Method: Composition-based stats. Identities = 176/554 (31%), Positives = 307/554 (55%), Gaps = 8/554 (1%) Query: 4 SFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDA-GLKSESAIPAEQFKNAQGELEI 62 FA+L E+L+ I + SIV G V +D V V G KS + + +A+ + + Sbjct: 17 EFAKLITENLENIILKDNSIVTGSVEKVDDKYVHVFIKGAKSSGLVDINEIPHAELD-GL 75 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 + G E++V L+ ED G +LS EKA+R ++W +E+A+E E V+G+I VKGG V Sbjct: 76 EEGKEIEVFLERTEDRNGNIVLSIEKARRAKSWKKIEEAFEKQEKVSGIIKNTVKGGVVV 135 Query: 123 ELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 E+ G+ AF P S V RP+++ K +EF++IK+D R NV+ SRR VIE E + + Sbjct: 136 EIFGVFAFCPNSQVADRPIKNMNEYMNKPMEFQIIKIDNVRMNVIASRRQVIEQEKNKNK 195 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 +++++N + G V+G +K + YG FV + +D LLH ++++ ++ + +++ VG++I Sbjct: 196 EKVIKNYKVGDVVEGTIKAVQSYGCFVSIESLDCLLHSSEVSHLKISNLNDMFTVGEKIK 255 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 VKVL+ D E R+SL +K + DP+ I ++ G + ++ LTD+G F E++EG+ G Sbjct: 256 VKVLEIDNENMRMSLSVKAMLPDPFETIKDKFSIGNEYEVKIVKLTDFGAFAEMQEGIVG 315 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHN 362 L+H SE+ KN++P +GD V+V + ++D E+R+I+L K C NP +F + + Sbjct: 316 LIHTSEIKHMQKNVNPKSAFKIGDTVKVKLKEVDTEKRKIALSYKDCLPNPVDEFIKKYP 375 Query: 363 KGDRVEGKIKSITDFGIFIGL-DGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQ 421 G V+ K+ + DFGIF D ID VH + + +A+ + KGDE+ + Sbjct: 376 IGTTVKTKVVTKKDFGIFCNTGDNDIDIFVHYKQLDY-AESSKALDNFNKGDEVELKI-- 432 Query: 422 VDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVEL-ADGVEGYLRA 480 +D + ++++ ++ L +DPF+ + K G IV+ +V V G V++ + + +R Sbjct: 433 IDIKDDKVNGSIRALKKDPFS-FFDDKKIGDIVSTRVVEVQDNGLKVDVGPERYQTIIRK 491 Query: 481 SEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDA 540 SE + ++ + S GD ++A +D + R + LSV+ ++ +AI Sbjct: 492 SELALEKSDQRPNRFSSGDSIDAAILELDAEKRRVKLSVKKLEQQQADEAIEKYGSTSSG 551 Query: 541 NFSNNAMAEAFKAA 554 + EA + Sbjct: 552 QSLAGILGEALEKK 565 >UniRef50_C0QZM2 30S ribosomal protein S1 n=2 Tax=Brachyspira RepID=C0QZM2_BRAHW Length = 554 Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats. Identities = 183/550 (33%), Positives = 294/550 (53%), Gaps = 13/550 (2%) Query: 4 SFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQ 63 F + EES G IV+G VV D V +D KSE I +F + E Sbjct: 13 EFRKALEESDNTF-LSRGKIVKGKVVQFDDTDVFIDFDSKSEGKIKRSEF-----DKEPT 66 Query: 64 VGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVE 123 +G+E++ + ED G +LS+ + + ++ ++ A ++ +TGV+ +KGGF V Sbjct: 67 IGEEIEAIVSG-EDDKGYVILSKSEIDKRKSQELIDNAVKNNTAITGVVKEVIKGGFKVS 125 Query: 124 LNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERD 183 + G +AF P S +D+ GKE EF+VIK + +VVVSRR ++E +A + Sbjct: 126 IMGHQAFCPFSQIDLARGIKEADYIGKEYEFRVIK--KNGRDVVVSRRVLLEETQNAGIE 183 Query: 184 QLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 L NL+E + G VKN+ +GAF+++ G DG L I +M+W +V +P +++ G+E Sbjct: 184 TFLNNLKENDIINGKVKNIEKFGAFIEITPGFDGFLAIPNMSWDKVVNPKSVISKGEERM 243 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 KVL D+E +V LGLKQL EDPW ++Y G + G VTN+ +G FV++ +G+EG Sbjct: 244 FKVLHIDKENRKVDLGLKQLDEDPWGKFVEQYHIGDIINGEVTNVKKFGAFVKVADGIEG 303 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHN 362 LVHVS++ W + +PS V G +E +LD++ R+++LGLKQ K NPW + Sbjct: 304 LVHVSDLSWNSHVNNPSDFVKKGAFLECKILDMNAAERKLTLGLKQVKENPWDTVEKDFP 363 Query: 363 KGDRVEGKIKS-ITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQ 421 V+ K+K I +F +F L G++G+ +SD W K+G+E+ V++ Sbjct: 364 VKSAVKCKVKRIIKNFAVF-ELPNGLEGICDISDFDWRNNIVNMKDYVKEGEEVNMVIMS 422 Query: 422 VDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRAS 481 +D +++RI L K + P+ + + +G+IV G V A+ GA V L D +EGY+ S Sbjct: 423 IDRDKQRIKLSYKHTKDSPWRLFEKAHPQGSIVDGTVKAIVDSGAIVSLEDDLEGYMHVS 482 Query: 482 EASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEA-DEKDAIATVNKQEDA 540 + + V+ VG+ V++ R ISLS R EA ++K+ ++K E Sbjct: 483 QVEIPKGSTLEEVVKVGETYPFVVREVNQSKRRISLSRREYMEAQNKKETQNYISKAEPT 542 Query: 541 NFSNNAMAEA 550 + + N Sbjct: 543 SLTYNPFDNI 552 Score = 241 bits (615), Expect = 6e-62, Method: Composition-based stats. Identities = 107/474 (22%), Positives = 210/474 (44%), Gaps = 22/474 (4%) Query: 84 LSREKAKRHEAWITLEKAY-EDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVR 142 LS ++ + +A + + + V G + ++ + S ++ Sbjct: 7 LSNDEIEFRKALEESDNTFLSRGKIVKGKVVQFDDTDVFIDFDS------KSEGKIKRSE 60 Query: 143 -DTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKN 201 D G+E+E V D K ++ E + ++ + ++ + G+VK Sbjct: 61 FDKEPTIGEEIEAIVSGEDDKGYVILSKS----EIDKRKSQELIDNAVKNNTAITGVVKE 116 Query: 202 LTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQ 261 + G V + G + + R ++ +G E +V+K + V + + Sbjct: 117 VIKGGFKVSIMGHQAFCPFSQIDLARGIKEADY--IGKEYEFRVIK--KNGRDVVVSRRV 172 Query: 262 LGEDPW----VAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIH 317 L E+ E + G+V N+ +G F+EI G +G + + M W +K ++ Sbjct: 173 LLEETQNAGIETFLNNLKENDIINGKVKNIEKFGAFIEITPGFDGFLAIPNMSW-DKVVN 231 Query: 318 PSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDF 377 P V++ G+ VL ID+E R++ LGLKQ +PW +F E ++ GD + G++ ++ F Sbjct: 232 PKSVISKGEERMFKVLHIDKENRKVDLGLKQLDEDPWGKFVEQYHIGDIINGEVTNVKKF 291 Query: 378 GIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLA 437 G F+ + GI+GLVH+SD+SWN KKG + +L ++A +++LG+KQ+ Sbjct: 292 GAFVKVADGIEGLVHVSDLSWNSHVNNPSDFVKKGAFLECKILDMNAAERKLTLGLKQVK 351 Query: 438 EDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEAS-RDRVEDATLVLS 496 E+P++ + V KV + A EL +G+EG S+ R+ + + + Sbjct: 352 ENPWDTVEKDFPVKSAVKCKVKRIIKNFAVFELPNGLEGICDISDFDWRNNIVNMKDYVK 411 Query: 497 VGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEA 550 G+EV +DR + I LS + ++ + + + + A+ ++ Sbjct: 412 EGEEVNMVIMSIDRDKQRIKLSYKHTKDSPWRLFEKAHPQGSIVDGTVKAIVDS 465 >UniRef50_Q2GE01 Ribosomal protein S1 n=2 Tax=Neorickettsia RepID=Q2GE01_NEOSM Length = 553 Score = 414 bits (1064), Expect = e-114, Method: Composition-based stats. Identities = 198/549 (36%), Positives = 306/549 (55%), Gaps = 34/549 (6%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE 61 E F + EE + R G +V GV+ +I VLV+ GLKSE IP +QF + Sbjct: 27 EEDFTTILEERFSDSLIREGDMVEGVIKSISPHFVLVNLGLKSEGKIPVQQFHDLG---T 83 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDA--ETVTGVINGKVKGG 119 ++VG ++ V ++ E G G +LS KA + + W L + Y + E V GVI +K G Sbjct: 84 LEVGSKIIVYVEKTETGSGNLVLSYTKALKQKVWNRLYEMYLNGSDEDVMGVILYTIKSG 143 Query: 120 FTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 VE+ G+ AFLP S +DVRPV D L G +L+F+++K+D K + VSRR + + + Sbjct: 144 CIVEVEGLNAFLPNSHLDVRPVSDPATLVGVKLKFRILKMDPKTGKIFVSRRKALGAVHE 203 Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDL------GGVDGLLHITDMAWKRVKHPSE 233 A R + + ++EG + G VK++ YG FV + G VDGLL++ D++W RV HPS Sbjct: 204 AARSEYISTIKEGDIIDGRVKSIASYGVFVQIHESDKVGVVDGLLYVNDISWARVTHPSS 263 Query: 234 IVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCF 293 I +VG E+ VKV+ D E+ R+SLG+KQL E+PW ++K+Y G G VT++ DYG F Sbjct: 264 IYSVGQEVRVKVIAVDPEKGRISLGVKQLTENPWKDVSKKYTPGNVYPGVVTSVEDYGIF 323 Query: 294 VEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP 353 V +EEGVEGLVH E+ WT + + V VM+L +DEE +I+L +KQC NP Sbjct: 324 VRLEEGVEGLVHSGEISWTREKP----LFLPNSKVNVMLLSVDEEGHKIALSVKQCSDNP 379 Query: 354 WQQFAETHNKGDRVEGKIKSITDFGIFIG-LDGG---IDGLVHLSDISWNVAGEEAVREY 409 W++F + + G V+ K+ ITD GI + LD G + G V L++ISW+ + ++ + Sbjct: 380 WKKFLDAYGLGVVVKCKVVEITDSGIVLTLLDPGYSYVRGYVRLANISWSQNPRKELKRF 439 Query: 410 KKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVE 469 GDE+ A ++ V+ +R R+ +K + DPF +++ + I+ KV V+ G +E Sbjct: 440 TIGDEVEAKLVHVNPDRGRVMFNIKYVEYDPFEEFISRVNEKDIINAKVIRVEDDGIYIE 499 Query: 470 LADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKD 529 + +G+E + S+ SR L+VG + D SV+ + DEK Sbjct: 500 VREGLEFFTAQSDVSR---------LTVGQHLSFVVCSKDHY------SVKLEIITDEKA 544 Query: 530 AIATVNKQE 538 A +++ Sbjct: 545 GGAPAGEEK 553 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 116/454 (25%), Positives = 215/454 (47%), Gaps = 29/454 (6%) Query: 104 DAETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRPVRDTLHL-EGKELEFKVIKLDQ 161 + + V GVI V L +P D L G ++ V K + Sbjct: 45 EGDMVEGVIKSISPHFVLVNLGLKSEGKIPVQQ-----FHDLGTLEVGSKIIVYVEKTET 99 Query: 162 KRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHIT 221 N+V+S ++ + ++ N +V G++ G V++ G++ L + Sbjct: 100 GSGNLVLSYTKALKQKVWNRLYEMYLN-GSDEDVMGVILYTIKSGCIVEVEGLNAFLPNS 158 Query: 222 DMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQ----LGEDPWVAIAKRYPEG 277 + + V P+ + VG ++ ++LK D + ++ + ++ + E EG Sbjct: 159 HLDVRPVSDPATL--VGVKLKFRILKMDPKTGKIFVSRRKALGAVHEAARSEYISTIKEG 216 Query: 278 TKLTGRVTNLTDYGCFVEIEEG-----VEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMV 332 + GRV ++ YG FV+I E V+GL++V+++ W + HPS + +VG V V V Sbjct: 217 DIIDGRVKSIASYGVFVQIHESDKVGVVDGLLYVNDISWA-RVTHPSSIYSVGQEVRVKV 275 Query: 333 LDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVH 392 + +D E+ RISLG+KQ NPW+ ++ + G+ G + S+ D+GIF+ L+ G++GLVH Sbjct: 276 IAVDPEKGRISLGVKQLTENPWKDVSKKYTPGNVYPGVVTSVEDYGIFVRLEEGVEGLVH 335 Query: 393 LSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGA 452 +ISW + ++ ++L VD E +I+L VKQ +++P+ ++ G Sbjct: 336 SGEISWTREKP----LFLPNSKVNVMLLSVDEEGHKIALSVKQCSDNPWKKFLDAYGLGV 391 Query: 453 IVTGKVTAVDAKGATVELADG----VEGYLRASEASRDRVEDAT-LVLSVGDEVEAKFTG 507 +V KV + G + L D V GY+R + S + ++GDEVEAK Sbjct: 392 VVKCKVVEITDSGIVLTLLDPGYSYVRGYVRLANISWSQNPRKELKRFTIGDEVEAKLVH 451 Query: 508 VDRKNRAISLSVRAKDEADEKDAIATVNKQEDAN 541 V+ + +++ + ++ I+ VN+++ N Sbjct: 452 VNPDRGRVMFNIKYVEYDPFEEFISRVNEKDIIN 485 >UniRef50_B5Y9T3 Ribosomal protein S1 n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y9T3_COPPD Length = 559 Score = 410 bits (1053), Expect = e-113, Method: Composition-based stats. Identities = 161/556 (28%), Positives = 286/556 (51%), Gaps = 13/556 (2%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA--QGE 59 E+F Q F+ + E G +V G V+ D D + +D K ++ +P ++ + + Sbjct: 5 EENFNQEFDVEMAE----RGDLVEGTVLRADVDGLWLDIASKYDAFLPLDECTSELARQV 60 Query: 60 LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGG 119 E V V+V + D G +S+++A + W +E+ + E+ G G Sbjct: 61 QEGNVPTSVEVVVTRTNDDKGYISVSQKRAAYRKLWKDVEEWEKSGESRKVKAVGADDKG 120 Query: 120 FTVELN-GIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 V+L GI ++P S +++R VRDT G+ L K++++++KRN +++++R V+E E Sbjct: 121 VFVDLGAGILGYVPASQLEIRFVRDTKKYVGRSLRVKILRVNRKRNQIILTQRQVLEEEQ 180 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNV 237 ++ L++ V+G V +TD G FVDLG G++G + ++ W+ +K+ +++ Sbjct: 181 KERAEKAWLRLKDSDIVRGHVSRITDEGIFVDLGDGIEGFVPKDELDWRPIKNIAKVFRR 240 Query: 238 GDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE 297 GD + KVL D E+ + L ++ +PW A+++ G ++GRV G + ++ Sbjct: 241 GDVVRAKVLSVDEEKKEMVLSIRLATPNPWQLFAEKHNVGDVVSGRVLRYLRGGLLLLVD 300 Query: 298 EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQF 357 V GLV E+ W + + +GD V+ +L D E + + L +K+ +PW+ Sbjct: 301 R-VTGLVPAQEVSW-KRGAKVEDLYKIGDHVKAKILRFDPEAQDLILSVKEALGDPWENV 358 Query: 358 AETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAA 417 G + EG + +ITDFG+F+ L GI+GLV +SW ++ GD++ Sbjct: 359 ERDFPVGSKAEGTVVNITDFGVFVELAPGIEGLVPRRYVSWKRF-KDINEVVNIGDQVEV 417 Query: 418 VVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGY 477 VVL ++ +I+L ++ DP+ V + G +V GKV + +G VE+ADGVEG+ Sbjct: 418 VVLGINIVDRKITLSMRDTRPDPWEEVVKNIQPGQLVRGKVVTIIPQGVFVEIADGVEGF 477 Query: 478 LRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQ 537 + S+ S RV+D +S GDE+ AK G+D + R ISLSV+A E++ + Q Sbjct: 478 IHISQLSIRRVDDPRDAVSEGDEIVAKVIGIDEERRRISLSVKAIHVDKEREELQDFLSQ 537 Query: 538 --EDANFSNNAMAEAF 551 ED ++ + Sbjct: 538 QGEDKFTLSDVLGNLL 553 >UniRef50_Q8KTS5 Ribosomal protein S1 n=1 Tax=Candidatus Tremblaya princeps RepID=Q8KTS5_TREPR Length = 518 Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats. Identities = 211/431 (48%), Positives = 281/431 (65%), Gaps = 5/431 (1%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE-L 60 +L E K + PGSIV VVAI + V++ AGLKS+S +P +F + QG+ L Sbjct: 1 MHDHIRLLREYCKYYDAGPGSIVAARVVAISSNHVVLRAGLKSDSRVPLGEFVSPQGDRL 60 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 E++VGD ++ G LSR KA+R AW L+ A+ T+ G + G+VKGG Sbjct: 61 EVKVGDVTLAYVERDAYDEGTVRLSRSKARRRVAWGILDSAHRTRGTIMGTVVGRVKGGM 120 Query: 121 TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 T +NG+RAFLPGSL+D RPV+D EG+ L F VIKLD+KR NVV+SRR+VIE + Sbjct: 121 TAVVNGMRAFLPGSLIDTRPVKDAERYEGRRLRFHVIKLDRKRGNVVLSRRSVIERRQAE 180 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 R++LL +L +G V+G++KN+TDYGAF+DLGG+DGLLHITD++W+R++HPS++++VGD Sbjct: 181 NRNRLLASLGDGDVVQGVIKNITDYGAFIDLGGLDGLLHITDISWRRIRHPSQVLSVGDR 240 Query: 241 ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV 300 ITVKVLKFDR +TRVSLGLKQL DPW I RYP G+++ GRVTN+ DYG FVEIE G+ Sbjct: 241 ITVKVLKFDRTKTRVSLGLKQLHPDPWAGIIGRYPAGSRVRGRVTNIADYGLFVEIERGI 300 Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAET 360 EGL+HVSEM +K + VG V V VLD+ + RRRISLG+K NPW F + Sbjct: 301 EGLLHVSEMHQKSKGTISLRHFRVGQYVNVTVLDVSKTRRRISLGMKHGTLNPWLTFYKG 360 Query: 361 HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL 420 K DR+ I+S D GI + L G+ G+V +S +R G + A V+ Sbjct: 361 FRKNDRMGAIIRSPVDVGILVDLPMGVHGVVCMS----KDLRRRLLRALCSGGVVEARVV 416 Query: 421 QVDAERERISL 431 VD R RISL Sbjct: 417 GVDVNRGRISL 427 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 109/391 (27%), Positives = 183/391 (46%), Gaps = 24/391 (6%) Query: 140 PVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGM------ 193 P+ + + +G LE KV + V R A E R + + G+ Sbjct: 48 PLGEFVSPQGDRLEVKVGDV----TLAYVERDAYDEGTVRLSRSKARRRVAWGILDSAHR 103 Query: 194 ---EVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDR 250 + G V G + G+ L + + + VK G + V+K DR Sbjct: 104 TRGTIMGTVVGRVKGGMTAVVNGMRAFLPGSLIDTRPVKDAERY--EGRRLRFHVIKLDR 161 Query: 251 ERTRVSLGLKQLGE----DPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHV 306 +R V L + + E + + +G + G + N+TDYG F+++ G++GL+H+ Sbjct: 162 KRGNVVLSRRSVIERRQAENRNRLLASLGDGDVVQGVIKNITDYGAFIDLG-GLDGLLHI 220 Query: 307 SEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDR 366 +++ W + HPS+V++VGD + V VL D + R+SLGLKQ +PW + G R Sbjct: 221 TDISW-RRIRHPSQVLSVGDRITVKVLKFDRTKTRVSLGLKQLHPDPWAGIIGRYPAGSR 279 Query: 367 VEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAER 426 V G++ +I D+G+F+ ++ GI+GL+H+S++ G ++R ++ G + VL V R Sbjct: 280 VRGRVTNIADYGLFVEIERGIEGLLHVSEMHQKSKGTISLRHFRVGQYVNVTVLDVSKTR 339 Query: 427 ERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRD 486 RISLG+K +P+ + +K + + + G V+L GV G + S+D Sbjct: 340 RRISLGMKHGTLNPWLTFYKGFRKNDRMGAIIRSPVDVGILVDLPMGVHGVV---CMSKD 396 Query: 487 RVEDATLVLSVGDEVEAKFTGVDRKNRAISL 517 L G VEA+ GVD ISL Sbjct: 397 LRRRLLRALCSGGVVEARVVGVDVNRGRISL 427 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 90/346 (26%), Positives = 139/346 (40%), Gaps = 33/346 (9%) Query: 191 EGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKF-- 248 G V V ++ + G + RV + GD + VKV Sbjct: 19 PGSIVAARVVAISSNHVVLRAG---------LKSDSRVPLGEFVSPQGDRLEVKVGDVTL 69 Query: 249 --------DRERTRVSLGLKQLGEDPW-VAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEG 299 D R+S K W + + GT + V + G + G Sbjct: 70 AYVERDAYDEGTVRLSRS-KARRRVAWGILDSAHRTRGTIMGTVVGRVK--GGMTAVVNG 126 Query: 300 VEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC----KANPWQ 355 + + S +D T + G + V+ +D +R + L + +A Sbjct: 127 MRAFLPGSLID-TRPVKDAERY--EGRRLRFHVIKLDRKRGNVVLSRRSVIERRQAENRN 183 Query: 356 QFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEI 415 + + GD V+G IK+ITD+G FI L GG+DGL+H++DISW + GD I Sbjct: 184 RLLASLGDGDVVQGVIKNITDYGAFIDL-GGLDGLLHITDISW-RRIRHPSQVLSVGDRI 241 Query: 416 AAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVE 475 VL+ D + R+SLG+KQL DP+ + G+ V G+VT + G VE+ G+E Sbjct: 242 TVKVLKFDRTKTRVSLGLKQLHPDPWAGIIGRYPAGSRVRGRVTNIADYGLFVEIERGIE 301 Query: 476 GYLRASEASRDRVEDAT-LVLSVGDEVEAKFTGVDRKNRAISLSVR 520 G L SE + + VG V V + R ISL ++ Sbjct: 302 GLLHVSEMHQKSKGTISLRHFRVGQYVNVTVLDVSKTRRRISLGMK 347 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 56/273 (20%), Positives = 99/273 (36%), Gaps = 31/273 (11%) Query: 276 EGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDI 335 G+ + RV ++ + + V + E V GD +EV V D+ Sbjct: 19 PGSIVAARVVAISSNHVVLRAGLKSDSRVPLGEF-----------VSPQGDRLEVKVGDV 67 Query: 336 ----------DEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDG 385 DE R+S K + W H + G + G+ + Sbjct: 68 TLAYVERDAYDEGTVRLSRS-KARRRVAWGILDSAHRTRGTIMGTVVGRVKGGM-TAVVN 125 Query: 386 GIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAE----DPF 441 G+ + S I + E G + V+++D +R + L + + E + Sbjct: 126 GMRAFLPGSLIDTRPVKDAERYE---GRRLRFHVIKLDRKRGNVVLSRRSVIERRQAENR 182 Query: 442 NNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEV 501 N +A G +V G + + GA ++L G++G L ++ S R+ + VLSVGD + Sbjct: 183 NRLLASLGDGDVVQGVIKNITDYGAFIDLG-GLDGLLHITDISWRRIRHPSQVLSVGDRI 241 Query: 502 EAKFTGVDRKNRAISLSVRAKDEADEKDAIATV 534 K DR +SL ++ I Sbjct: 242 TVKVLKFDRTKTRVSLGLKQLHPDPWAGIIGRY 274 >UniRef50_A8F7S1 RNA binding S1 domain protein n=1 Tax=Thermotoga lettingae TMO RepID=A8F7S1_THELT Length = 539 Score = 403 bits (1037), Expect = e-111, Method: Composition-based stats. Identities = 165/560 (29%), Positives = 290/560 (51%), Gaps = 28/560 (5%) Query: 1 MTESFAQL--FEESLKEIETRPGSIVRGVVVAIDK-DVVLVDAGLKSESAIPAEQFKNAQ 57 MT+ ++ F+E L +ET PGS+V VV I+ + + VD G K E I + ++ Sbjct: 1 MTDEHEKMENFQEYLDFVETNPGSVVEAVVTRINPAEGISVDFGGKGEGIIQQNELIHSI 60 Query: 58 GELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVK 117 + VG ++ + + D G LLS ++ E TL KAYE V G I + Sbjct: 61 E--KYSVGQKIKAQILKINDEEGYALLSEKRPYIREMRNTLRKAYESKIPVKGKIVQTIP 118 Query: 118 GGFTVELNGI-RAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNN--VVVSRRAVI 174 GG+ V ++ I AFLPGS ++ + KE+ F +I+ +RN +VVSR+A++ Sbjct: 119 GGYRVLISNIFDAFLPGSQSLLKR---NQSFQEKEMNFLIIEYSVRRNKLHIVVSRKALL 175 Query: 175 ESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEI 234 E + + + G E++G V+++ A +D G+ L ++M+ P +I Sbjct: 176 ERL----KKEFFNTHKVGDEIEGTVESIRMNHAIIDFDGIKAFLPRSEMSHDPSVSPDDI 231 Query: 235 VNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFV 294 + D+I VK+++ + R+ +++ LK L DPW+ +++RY GT + G V ++ +G F+ Sbjct: 232 LKKNDQIKVKIIEINPARSSITVSLKALEPDPWLKVSERYSVGTVVQGTVKSIMPFGIFL 291 Query: 295 EIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPW 354 +E G++GL+H+SE+ WT+K K +G +V+ V++ID E+ RI+L K+ K +PW Sbjct: 292 NLEPGLDGLIHISEVFWTSKKADLHKYFKIGQIVQAEVIEIDPEKHRIALSYKKAKGDPW 351 Query: 355 QQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDE 414 ++ + +N+GD V GKI I G+ + L+ G+ G V S++SWN ++ +K+ D Sbjct: 352 EEVVQKYNEGDVVSGKIVRILPAGVIVELEDGVSGFVPKSELSWNKV-KDPTDLFKEKDR 410 Query: 415 IAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELAD-G 473 + +L +D ++ R+ L VKQL DP++ V + ++ V + G +EL D Sbjct: 411 LNVKILSIDKQKRRMRLSVKQLTPDPWDEVVTKLSENSVAKALVKSKVNSGFIIELKDFS 470 Query: 474 VEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIAT 533 ++G + AS A L GDEVE + + R + +S + +E K A Sbjct: 471 IDGLMPAS--------HADESLKEGDEVEVLVLRLIPERRKLLVSQKKLEE---KKAYEE 519 Query: 534 VNKQEDANFSNNAMAEAFKA 553 + D + + + K+ Sbjct: 520 YKSKIDESTVKRTLGDRMKS 539 >UniRef50_Q30ZT8 SSU ribosomal protein S1P n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30ZT8_DESDG Length = 482 Score = 402 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 161/454 (35%), Positives = 246/454 (54%), Gaps = 10/454 (2%) Query: 2 TESFAQLFEESLKE--IETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE 59 ++SFA L ++ E R G V+G VVA+D+ V + G K + I AE+ K+ +G Sbjct: 10 SDSFADLLDQYSPEAGSPLRVGEKVKGSVVAMDESSVFIATGSKVDGVIDAEELKDKEGN 69 Query: 60 LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGG 119 + VGDE+D+ + A+ GE LSR A + L +A+E+ V G + + KGG Sbjct: 70 VTCAVGDELDLYVVAITQ--GEVRLSRSAGSAGSA-MALTEAFENGVPVEGKVTAQCKGG 126 Query: 120 FTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 F VE+ RAF P S +D R V + G+ +F + + + NVVVSRR ++E++ Sbjct: 127 FNVEVMQRRAFCPVSQIDSRFVENPEEYLGQTFQFMITRCENNGRNVVVSRRVLLEAQQE 186 Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVG 238 R + ++ L EG V + LT++GAF +L GV+GL+HI+++ W RV+ E V G Sbjct: 187 ESRKEYMKTLNEGDVVDVCITRLTNFGAFAELAPGVEGLIHISELGWARVQSADEAVTQG 246 Query: 239 DEITVKVLKFDRERT--RVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI 296 D + KVLK + R++L KQ+ EDPW +A R GT + G+V T +G FVE+ Sbjct: 247 DTLRAKVLKIESTAKGLRIALSAKQVMEDPWNTVADRLAAGTVVEGKVVRCTPFGAFVEV 306 Query: 297 EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQ 356 G+EGLVH+SEM WT + + VV GD V V + DID +RRISL L++ + +PW Sbjct: 307 LPGIEGLVHISEMSWTRRILKAEDVVIPGDTVSVKIKDIDSAKRRISLSLREAEGDPWDG 366 Query: 357 FAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIA 416 AE G V G ++ FG+F+ + GI GL+ S IS A + + K GD + Sbjct: 367 AAEKFAPGTEVTGTVEKCAKFGMFVNIAPGITGLLPQSRIS--AAPKSGLAGCKPGDTVT 424 Query: 417 AVVLQVDAERERISLGVKQLAEDPFNNWVALNKK 450 V++++ +++L K A A + Sbjct: 425 LAVMEINPAERKVTLTTKDAARQEDAEIPASYRV 458 Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats. Identities = 112/459 (24%), Positives = 193/459 (42%), Gaps = 20/459 (4%) Query: 105 AETVTGVINGKVKGG-FTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKR 163 E V G + + F + + + + + + G EL+ V+ + Q Sbjct: 31 GEKVKGSVVAMDESSVFIATGSKVDGVIDAEELKDKEG-NVTCAVGDELDLYVVAITQ-- 87 Query: 164 NNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDM 223 V +SR A A L E + G+ V+G V G V++ ++ + Sbjct: 88 GEVRLSRSAGSAGSAMA----LTEAFENGVPVEGKVTAQCKGGFNVEVMQRRAFCPVSQI 143 Query: 224 AWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQL----GEDPWVAIAKRYPEGTK 279 + V++P E + G + + + V + + L E+ K EG Sbjct: 144 DSRFVENPEEYL--GQTFQFMITRCENNGRNVVVSRRVLLEAQQEESRKEYMKTLNEGDV 201 Query: 280 LTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEER 339 + +T LT++G F E+ GVEGL+H+SE+ W + + V GD + VL I+ Sbjct: 202 VDVCITRLTNFGAFAELAPGVEGLIHISELGWA-RVQSADEAVTQGDTLRAKVLKIESTA 260 Query: 340 R--RISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDIS 397 + RI+L KQ +PW A+ G VEGK+ T FG F+ + GI+GLVH+S++S Sbjct: 261 KGLRIALSAKQVMEDPWNTVADRLAAGTVVEGKVVRCTPFGAFVEVLPGIEGLVHISEMS 320 Query: 398 WNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGK 457 W +A GD ++ + +D+ + RISL +++ DP++ G VTG Sbjct: 321 WTRRILKAEDVVIPGDTVSVKIKDIDSAKRRISLSLREAEGDPWDGAAEKFAPGTEVTGT 380 Query: 458 VTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISL 517 V G V +A G+ G L S S GD V ++ R ++L Sbjct: 381 VEKCAKFGMFVNIAPGITGLLPQSRISAAPKSGLA-GCKPGDTVTLAVMEINPAERKVTL 439 Query: 518 SVRAKDEADEKDAIATVNKQEDANFSN--NAMAEAFKAA 554 + + ++ + A+ Q ++ + +A K A Sbjct: 440 TTKDAARQEDAEIPASYRVQPKSSQGGGFGTLGQALKDA 478 Score = 70.8 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 74/201 (36%), Gaps = 9/201 (4%) Query: 336 DEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSD 395 D++ + S + G++V+G + ++ + +FI +DG++ + Sbjct: 3 DDQNQTGSDSFADLLDQYSPEAGSPLRVGEKVKGSVVAMDESSVFIATGSKVDGVIDAEE 62 Query: 396 ISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVT 455 + +E GDE+ V+ + + + L + + G V Sbjct: 63 L----KDKEGNVTCAVGDELDLYVVAI--TQGEVRLSRSAGSAGSAMALTEAFENGVPVE 116 Query: 456 GKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAI 515 GKVTA G VE+ + S+ VE+ L G + T + R + Sbjct: 117 GKVTAQCKGGFNVEVMQR-RAFCPVSQIDSRFVENPEEYL--GQTFQFMITRCENNGRNV 173 Query: 516 SLSVRAKDEADEKDAIATVNK 536 +S R EA ++++ K Sbjct: 174 VVSRRVLLEAQQEESRKEYMK 194 >UniRef50_Q9ZKF6 30S ribosomal protein S1 n=44 Tax=Epsilonproteobacteria RepID=RS1_HELPJ Length = 552 Score = 400 bits (1028), Expect = e-110, Method: Composition-based stats. Identities = 159/554 (28%), Positives = 288/554 (51%), Gaps = 19/554 (3%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKD--VVLVDAGLKSESAIPAEQFKNAQGE 59 E FA+L E KE G+I G++V+I+++ +V G K+E + + + +G+ Sbjct: 14 EEDFAKLLE---KEETLEKGTIKEGLIVSINENDGYAMVSVGGKTEGRLALNEITDEKGQ 70 Query: 60 LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYED--AETVTGVINGKVK 117 L Q D + V + E G ++ ++ + + +E+ E+ + G I GK K Sbjct: 71 LMYQKNDPIVVHV--SEKGEHPSVSYKKAISQQKIQAKIEELGENYENAIIEGKIVGKNK 128 Query: 118 GGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESE 177 GG+ VE G+ FL S + ++ + GK ++ +I++D++ +++ +SR+ E Sbjct: 129 GGYIVESQGVEYFLSRSHSSL---KNDANHIGKRIKACIIRVDKENHSINISRKRFFEVN 185 Query: 178 NSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNV 237 + + + E L+ V G+V+ +T +G FV G+DGL+H ++++ K +P + Sbjct: 186 DKRQLEISKELLEATEPVLGVVRQITPFGIFVKFKGIDGLVHYSEISHKGPVNPEKYYKE 245 Query: 238 GDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE 297 GDE+ VK + +D E+ R+SL +K EDPW I + G + V+N+ YG FV+I Sbjct: 246 GDEVYVKAIAYDEEKRRLSLSIKATIEDPWEEIQDKLKPGYAIKVVVSNIEHYGVFVDIG 305 Query: 298 EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQF 357 +EG +HVSE+ W HPS ++VG ++V ++DID + RR+ + LKQ P+ F Sbjct: 306 NDIEGFLHVSEISWDKNVSHPSHYLSVGQEIDVKIIDIDPKNRRLRVSLKQLTNRPFDVF 365 Query: 358 AETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAA 417 H GD VEGK+ ++TDFG F+ L GG+DGL+H D W+ ++ YK GD I Sbjct: 366 ESKHQVGDIVEGKVATLTDFGAFLNL-GGVDGLLHNHDAFWD-KDKKCKDHYKIGDVIKV 423 Query: 418 VVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGY 477 +L+++ + ++ISL K L P + +K +++ GKV ++ G + ADG++ Sbjct: 424 KILKINKKDKKISLSAKHLVTSPTEEFAQKHKTDSVIQGKVVSIKDFGVFIH-ADGIDVL 482 Query: 478 LRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQ 537 ++ + + + + +G E+ +++ N + SV + EK+ + N Sbjct: 483 IKNEDLNPLK----KDEIKIGQEITCVVVAIEKSNNKVRASVHRLERKKEKEELQAFNTS 538 Query: 538 EDANFSNNAMAEAF 551 +D + + E Sbjct: 539 DDKMTLGDILKEKL 552 >UniRef50_C3XIZ7 30s ribosomal protein s1 n=6 Tax=Campylobacterales RepID=C3XIZ7_9HELI Length = 562 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 163/555 (29%), Positives = 292/555 (52%), Gaps = 19/555 (3%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEI 62 E FA + S + + + G +V ID + V++D K E + ++ K++ G L Sbjct: 17 EDFATMLSRSEQSEDNV---LREGKIVKIDDESVMIDVQDKKEGRMSIDEIKDSNGNLLF 73 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYE---DAETVTGVINGKVKGG 119 + GD + V + G +S +KA ++E + KA + V GVI GK KGG Sbjct: 74 KQGDSILVHVSKK----GGLRVSYKKAIKYEKVVNEIKALGTDYKDKVVEGVIRGKNKGG 129 Query: 120 FTVE-LNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 + VE NG+ F+P + +D + GK ++ ++ + N++V+SR+ +++ Sbjct: 130 YIVESANGVEYFMPRHYSALSRDKDDSKVVGKPIKACIVDIRPNGNSIVISRKRYLDTHT 189 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVG 238 +A+++ + L G+ +G+VKN+T +G FV++G VDGL+H T+++ + +P + VG Sbjct: 190 AAQKENAKKILDSGLAYEGVVKNVTKFGLFVEIGSVDGLVHFTEISHRGPVNPEKHYKVG 249 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE 298 D++ VK L+++ E+ R+SL ++ L +DPW I G + V+N+ DYG FV++ Sbjct: 250 DKVQVKPLEYNEEKNRLSLSIRALFDDPWKEIKDEIKVGYVIRVTVSNIEDYGAFVDLGN 309 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFA 358 VEG +H+SEM W PS + VG+ + V V++ID + RR+ + LK+ + P+ +F Sbjct: 310 DVEGFLHISEMSWDKNIKQPSDCLKVGEEINVEVIEIDPDNRRLRVSLKKLQDKPFVRFT 369 Query: 359 ETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAV 418 + H GD ++GK+ +IT+FG F+ L G +DGL+H D W+ ++ E+K GD I Sbjct: 370 KEHKVGDVIKGKVATITNFGAFVNL-GAVDGLLHNEDAFWD-KSKKCADEFKVGDSIEVK 427 Query: 419 VLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELA-DGVEGY 477 + ++D E+ISL + L E P + ++G+V + G +++ + ++ Sbjct: 428 IDKIDTANEKISLNRRYLVESPSEQFAKKYAIDDEISGQVIDIKDFGVFIKVENENIDAL 487 Query: 478 LRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQ 537 +R + A + VGD ++ VDRK + LSVR + E+ + N Sbjct: 488 IRNEDLGNI----ARDSIKVGDTIKGALVQVDRKANRVRLSVRRLQKKKERQELNDYNSD 543 Query: 538 EDANFSNNAMAEAFK 552 E + + + FK Sbjct: 544 EKVTL-GDTLGDKFK 557 >UniRef50_D1B5G8 RNA binding S1 domain protein n=3 Tax=Synergistaceae RepID=D1B5G8_THEAS Length = 504 Score = 397 bits (1021), Expect = e-109, Method: Composition-based stats. Identities = 157/441 (35%), Positives = 260/441 (58%), Gaps = 9/441 (2%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQGE 59 E+ + E+ + + GS+V G VV +D LVD G K E +P ++ + + Sbjct: 18 ETMESIMEQ-IDSVNIHRGSVVEGTVVDAREDGWLVDVGYKCEGFLPRREWSHRAIVEKV 76 Query: 60 LEIQVGDEVDVALDAVEDGF-GETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 E QVGD + V + V G + LSR + + E W LE+ ++ + KVKG Sbjct: 77 GEPQVGDRIRVQVTNVGQGEEAQLNLSRWRCEFDERWNALEEKLAQSDVIEVEGIRKVKG 136 Query: 119 GFTVELNGIRAFLPGSLVDVR-PVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESE 177 G V+ G+ F+P S + + +L GK K+++ D+++ +V+SRR++++ E Sbjct: 137 GLIVDCCGLEGFIPISHLAEEGRGINPANLVGKTFPVKLVEKDRRKRRLVLSRRSILDEE 196 Query: 178 NSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNV 237 ++ R++ N+ EG ++G V ++T +G FV+LG ++GL+HIT+++W+R ++V Sbjct: 197 MASLREEFYANVHEGDILEGEVSSITSFGVFVNLGAMEGLVHITELSWQRGAKAKDLVQK 256 Query: 238 GDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE 297 GD++ VKV+ DRE RVSL LKQ EDPWV + R+ G + G VTNL D+G FVEIE Sbjct: 257 GDKVKVKVIGIDRENNRVSLSLKQAQEDPWVGVTSRWTVGQRTKGVVTNLADFGAFVEIE 316 Query: 298 EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQF 357 GVEGL+H+ ++ W+ + HP +V+ G VEV++L++D +RRRI LGLKQ +PW Sbjct: 317 PGVEGLIHIGDLSWS-RVKHPKEVLKKGQEVEVVILEVDGDRRRIGLGLKQLN-DPWANV 374 Query: 358 AETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAA 417 +E ++K V K+ + DFG F+ ++ G++GL+H+S +S E+ ++G E+ A Sbjct: 375 SEKYSKDQVVTVKVVRLADFGAFVEIEDGVEGLIHISQLSRQRV-EKPSDVLREGQEVQA 433 Query: 418 VVLQVDAERERISLGVKQLAE 438 +L+V+ +RI L ++ L E Sbjct: 434 KILEVNPSEKRIRLSLRALEE 454 Score = 313 bits (803), Expect = 9e-84, Method: Composition-based stats. Identities = 133/428 (31%), Positives = 212/428 (49%), Gaps = 16/428 (3%) Query: 105 AETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRPVRDT--LHLEGKELEFKVIKLDQ 161 V G + + G+ V++ FLP R + + G + +V + Q Sbjct: 35 GSVVEGTVVDAREDGWLVDVGYKCEGFLPRREWSHRAIVEKVGEPQVGDRIRVQVTNVGQ 94 Query: 162 KRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHIT 221 + R E + L E L + ++ G VD G++G + I+ Sbjct: 95 GEEAQLNLSR--WRCEFDERWNALEEKLAQSDVIEVEGIRKVKGGLIVDCCGLEGFIPIS 152 Query: 222 DMAW-KRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPW----VAIAKRYPE 276 +A R +P+ + VG VK+++ DR + R+ L + + ++ E Sbjct: 153 HLAEEGRGINPANL--VGKTFPVKLVEKDRRKRRLVLSRRSILDEEMASLREEFYANVHE 210 Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDID 336 G L G V+++T +G FV + +EGLVH++E+ W + +V GD V+V V+ ID Sbjct: 211 GDILEGEVSSITSFGVFVNLGA-MEGLVHITELSW-QRGAKAKDLVQKGDKVKVKVIGID 268 Query: 337 EERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDI 396 E R+SL LKQ + +PW G R +G + ++ DFG F+ ++ G++GL+H+ D+ Sbjct: 269 RENNRVSLSLKQAQEDPWVGVTSRWTVGQRTKGVVTNLADFGAFVEIEPGVEGLIHIGDL 328 Query: 397 SWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTG 456 SW+ + KKG E+ V+L+VD +R RI LG+KQL DP+ N K +VT Sbjct: 329 SWSRV-KHPKEVLKKGQEVEVVILEVDGDRRRIGLGLKQL-NDPWANVSEKYSKDQVVTV 386 Query: 457 KVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAIS 516 KV + GA VE+ DGVEG + S+ SR RVE + VL G EV+AK V+ + I Sbjct: 387 KVVRLADFGAFVEIEDGVEGLIHISQLSRQRVEKPSDVLREGQEVQAKILEVNPSEKRIR 446 Query: 517 LSVRAKDE 524 LS+RA +E Sbjct: 447 LSLRALEE 454 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 99/369 (26%), Positives = 173/369 (46%), Gaps = 13/369 (3%) Query: 188 NLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVL 246 N+ G V+G V + + G VD+G +G L + + + + VGD I V+V Sbjct: 31 NIHRGSVVEGTVVDAREDGWLVDVGYKCEGFLPRREWSHRAIVEKVGEPQVGDRIRVQVT 90 Query: 247 KFDR-ERTRVSLGL-KQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLV 304 + E +++L + ++ W A+ ++ + + G V+ G+EG + Sbjct: 91 NVGQGEEAQLNLSRWRCEFDERWNALEEKLAQSDVIEVEGIRKVKGGLIVDCC-GLEGFI 149 Query: 305 HVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETH--- 361 +S + + I+P+ +V G V +++ D +RR+ L + E Sbjct: 150 PISHLAEEGRGINPANLV--GKTFPVKLVEKDRRKRRLVLSRRSILDEEMASLREEFYAN 207 Query: 362 -NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL 420 ++GD +EG++ SIT FG+F+ L G ++GLVH++++SW G +A +KGD++ V+ Sbjct: 208 VHEGDILEGEVSSITSFGVFVNL-GAMEGLVHITELSWQR-GAKAKDLVQKGDKVKVKVI 265 Query: 421 QVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRA 480 +D E R+SL +KQ EDP+ + G G VT + GA VE+ GVEG + Sbjct: 266 GIDRENNRVSLSLKQAQEDPWVGVTSRWTVGQRTKGVVTNLADFGAFVEIEPGVEGLIHI 325 Query: 481 SEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDA 540 + S RV+ VL G EVE VD R I L ++ + + +K + Sbjct: 326 GDLSWSRVKHPKEVLKKGQEVEVVILEVDGDRRRIGLGLKQLN-DPWANVSEKYSKDQVV 384 Query: 541 NFSNNAMAE 549 +A+ Sbjct: 385 TVKVVRLAD 393 >UniRef50_C7LJY0 Putative ribosomal protein S1 n=1 Tax=Candidatus Sulcia muelleri SMDSEM RepID=C7LJY0_SULMS Length = 648 Score = 397 bits (1020), Expect = e-109, Method: Composition-based stats. Identities = 174/535 (32%), Positives = 309/535 (57%), Gaps = 13/535 (2%) Query: 9 FEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEV 68 + E+L+ IE I +G ++ + V++D G K+E IP +F+ + + ++ D + Sbjct: 53 YTENLQRIEEFY--IYKGKIIQLIDRNVIIDIGFKAEGLIPFNEFR--ENKKFPKINDII 108 Query: 69 DVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIR 128 +V ++ + D G+ ++S KAK+ ++W ++ +++ E + + + KGG V L GI Sbjct: 109 EVIVEKL-DYKGKLIISYNKAKKLKSWERIQNSWKKNEIIIFFVTARTKGGLIVVLFGIE 167 Query: 129 AFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLEN 188 FLPGS ++ +PV+D + G+ +E K++K++ K NVVVS + ++E E+ +L+ Sbjct: 168 CFLPGSQIEKKPVKDFDYYVGQTMEGKIVKINNKTKNVVVSHKILLE--KDLEKKKLISQ 225 Query: 189 LQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLK 247 L++G + GIVKNLT YG+F+D+GG +DGL HITD++W+R+ HPSE + VG I +L Sbjct: 226 LEKGQILIGIVKNLTHYGSFIDVGGGIDGLCHITDISWERIDHPSEKLEVGQIINFVILS 285 Query: 248 FDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVS 307 D+ + RV LGLKQL +PW+ K+ +G L G V+ +TDYG FVE+ GVEGLVHVS Sbjct: 286 IDQIKNRVQLGLKQLQTNPWIHFEKKLKKGKVLIGTVSVVTDYGAFVELFPGVEGLVHVS 345 Query: 308 EMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRV 367 EM W + V +G+ V++++L+++ +++SL +K+ +PW+ + G R Sbjct: 346 EMSWHQQLKSAKNFVKIGEKVKILILNLEHSAQKMSLSMKRLSPDPWENIENKYPLGTRN 405 Query: 368 EGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERE 427 G +KS T+ G+ + L+ GI+GL++ SDISW + + YKKGD + +VL +D Sbjct: 406 IGTVKSFTNCGVRLELEPGIEGLLYNSDISWTEKIKSGLDIYKKGDLVQLIVLGLDVMTR 465 Query: 428 RISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELAD-GVEGYLRASEASRD 486 +++ G KQL ++P+ N + G+I GK+ +KG V+ + + + Sbjct: 466 KLNFGCKQLTKNPWENLEQIFPIGSIQIGKIIKFFSKGVIVKFNETTICAFAPLGFI--- 522 Query: 487 RVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDAN 541 ++ + ++L +E E K +++ + +S + K ++ +K E + Sbjct: 523 -IKKSGILLKPYEEAEFKILELEKNYQRFFVSHSSIYVPKIKKEKSSPSKFEVED 576 >UniRef50_B8DPH9 RNA binding S1 domain protein n=4 Tax=Desulfovibrio vulgaris RepID=B8DPH9_DESVM Length = 564 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 150/459 (32%), Positives = 241/459 (52%), Gaps = 20/459 (4%) Query: 4 SFAQLFE-ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEI 62 SFA L E S R G V+ VVAI +D V V G K + + ++ ++A+G L + Sbjct: 50 SFADLLEAHSGAAETVRTGERVKATVVAIGEDTVFVATGAKVDGLVDRKELEDAEGNLPV 109 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 VGD +++ + + E LSR + +E A + G + G KGGF V Sbjct: 110 AVGDVLELYVVSAN--ANEIKLSRAMGGQV-GLAQMEDALNAGIPIEGKVTGPCKGGFNV 166 Query: 123 ELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 E+ RAF P S +D+RP + G+ +F + +L+Q N+VVSRR ++E E + Sbjct: 167 EVLKRRAFCPASQMDLRPGAEPDSFTGQTFQFLITRLEQNGRNIVVSRRMLLEREQAESL 226 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEI 241 L+EN++EG ++G V L +GAFV++ G++G++H+++++W RV+ E V+VGD++ Sbjct: 227 SALMENVKEGDVLEGTVARLAPFGAFVEIAPGLEGMVHVSELSWSRVQQADEAVSVGDKV 286 Query: 242 TVKVLKF-----------DRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDY 290 VKVL R+ R+SL ++Q+ DPW +A R LTG+VT L + Sbjct: 287 RVKVLGIAGAEEGKGGKDSRKGPRISLSIRQVSGDPWQDVADRLDADQILTGKVTRLAPF 346 Query: 291 GCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCK 350 G F+E+ GVEGLVH+SEM WT + P + V G+ V V + ++D R+R+SL L+ + Sbjct: 347 GAFIEVLPGVEGLVHLSEMSWTRRINKPEEAVTPGETVSVRIKELDPARKRLSLSLRDAE 406 Query: 351 ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYK 410 +PW E G V G ++ FG+F+ L G+ GL+ + ++ + Sbjct: 407 GDPWSTVEERFPAGSTVTGTVEKRAPFGLFVNLAPGVTGLLPNA-VAATSPQSKTYAGLN 465 Query: 411 KGDEIAAVVLQVDAERERISLGVKQLA---EDPFNNWVA 446 G E++ VV +D + RISL +D + Sbjct: 466 PGAEVSLVVRDLDVKARRISLAPADATGEDDDEWRKLAQ 504 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 116/476 (24%), Positives = 194/476 (40%), Gaps = 28/476 (5%) Query: 89 AKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRPVRDTLHL 147 A EA + E V + + V + + ++ + Sbjct: 52 ADLLEAHSGAAETVRTGERVKATVVAIGEDTVFVATGAKVDGLVDRKELEDAEG-NLPVA 110 Query: 148 EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGA 207 G LE V+ + + RA+ A+ + + L G+ ++G V G Sbjct: 111 VGDVLELYVVSANANEIKLS---RAMGGQVGLAQME---DALNAGIPIEGKVTGPCKGGF 164 Query: 208 FVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGE--- 264 V++ + M + P G + + ++ + + + L E Sbjct: 165 NVEVLKRRAFCPASQMDLRPGAEPDSF--TGQTFQFLITRLEQNGRNIVVSRRMLLEREQ 222 Query: 265 -DPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVN 323 + A+ + EG L G V L +G FVEI G+EG+VHVSE+ W+ + + V+ Sbjct: 223 AESLSALMENVKEGDVLEGTVARLAPFGAFVEIAPGLEGMVHVSELSWS-RVQQADEAVS 281 Query: 324 VGDVVEVMVLDI----------DEERR-RISLGLKQCKANPWQQFAETHNKGDRVEGKIK 372 VGD V V VL I D + RISL ++Q +PWQ A+ + + GK+ Sbjct: 282 VGDKVRVKVLGIAGAEEGKGGKDSRKGPRISLSIRQVSGDPWQDVADRLDADQILTGKVT 341 Query: 373 SITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLG 432 + FG FI + G++GLVHLS++SW + G+ ++ + ++D R+R+SL Sbjct: 342 RLAPFGAFIEVLPGVEGLVHLSEMSWTRRINKPEEAVTPGETVSVRIKELDPARKRLSLS 401 Query: 433 VKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDAT 492 ++ DP++ G+ VTG V G V LA GV G L + A+ Sbjct: 402 LRDAEGDPWSTVEERFPAGSTVTGTVEKRAPFGLFVNLAPGVTGLLPNAVAATSPQSKTY 461 Query: 493 LVLSVGDEVEAKFTGVDRKNRAISLSVRAK--DEADEKDAIATVNKQEDANFSNNA 546 L+ G EV +D K R ISL+ ++ DE +A K+E + Sbjct: 462 AGLNPGAEVSLVVRDLDVKARRISLAPADATGEDDDEWRKLAQPQKREPREGRGGS 517 >UniRef50_C5CIV0 RNA binding S1 domain protein n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CIV0_KOSOT Length = 572 Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats. Identities = 171/557 (30%), Positives = 291/557 (52%), Gaps = 17/557 (3%) Query: 4 SFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQ 63 S + ++ + E++ R G V +I D +LV K + P + + E Sbjct: 14 SMEDILKQ-MDEVDERRGRSKTAEVHSIQPDGLLVILEGKLDGFAPESEL--VKPLKEYN 70 Query: 64 VGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVE 123 +GD+++V + V++ G +++S ++ A +E AY+ E VTG I G+ KGG+ V+ Sbjct: 71 IGDKIEVQIMKVDEDEGRSVVSEKRIYFRTALKKVENAYKSGEPVTGTILGETKGGYNVK 130 Query: 124 -LNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 LN + AFLPGS +R R E EFKVI +K+ + + + + Sbjct: 131 LLNVVPAFLPGSQSGIRRGRPIPE---GEQEFKVINFRKKKRGTNIV--VSLTAFKEEKV 185 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEI 241 E L+ G V+G ++++ D+GAFV L V GL+ ++++W + +++NVGD++ Sbjct: 186 KAYFEALETGSTVEGTIESIKDFGAFVRLTNEVVGLIPASEVSWDPSQKVHDVLNVGDKV 245 Query: 242 TVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVE 301 TVKV+ D E+ ++SL LKQL EDPW + ++YP G+ + G V ++ +G FV IE GVE Sbjct: 246 TVKVIDVDPEKKKISLSLKQLQEDPWNTVEEKYPVGSVVEGVVKSIVPFGFFVMIEPGVE 305 Query: 302 GLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETH 361 GLVH+SE+ W N +++ GD V+V + DID+E+R +SL ++ +PW E + Sbjct: 306 GLVHISEVFWGNVRRDLKELIREGDRVKVKIKDIDKEKRTLSLSYREALGDPWDNIEEKY 365 Query: 362 NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQ 421 G+ V+GK+ + G + L+ + G V +S++SWN + K+ E+ +L Sbjct: 366 KVGEIVDGKVVKVLPTGAIVELEEYVSGFVPVSEMSWNFV-DRVEDVVKESSEVKTKILS 424 Query: 422 VDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELAD-GVEGYLRA 480 +D E R+ L +KQ EDP+ K G V GK+T + GA V + GVE +L A Sbjct: 425 IDKENRRMRLSLKQATEDPWQKVHTELKVGDYVEGKITRLIKSGAVVMVDGYGVEAFLPA 484 Query: 481 SEASRDRVEDATLVLSVGDEVEAKFTGV--DRKN--RAISLSVRAKDEADEKDAIATVNK 536 S+ + RVE+ + +G+ K + D + R + +S++ EK+ + Sbjct: 485 SQVAMKRVENLEDAIKIGEHRRFKIIRLVYDPEKDVRNMVVSIKQLLLDKEKEETQKALE 544 Query: 537 QEDANFSNN-AMAEAFK 552 + S+ ++ E K Sbjct: 545 ELSGEESSTLSLGEKLK 561 >UniRef50_A8ZTZ3 RNA binding S1 domain protein n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZTZ3_DESOH Length = 492 Score = 393 bits (1011), Expect = e-108, Method: Composition-based stats. Identities = 149/438 (34%), Positives = 237/438 (54%), Gaps = 12/438 (2%) Query: 2 TESFAQLFEESLKEI--ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE 59 TE FA L E + ++ E R G + G ++AI KD V + G KS+ + + + GE Sbjct: 19 TEDFAALLESYMTDMKPEVRVGDKITGEIIAIGKDAVFFNTGTKSDGVVEKAELLDENGE 78 Query: 60 LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGG 119 L +VGD +D+ + D GE LS+ L +A+++ V G + KGG Sbjct: 79 LPHKVGDRLDLYVVDTRD--GEIRLSKAMGAGS-GVDMLYEAHQNRIPVEGKVIETCKGG 135 Query: 120 FTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 F +++ G AF P S +DV V G F + +++ + N+VV+RR ++E E + Sbjct: 136 FRIQVMGQTAFCPVSQMDVHYVEKPEEFVGAVFPFLIERIEARGKNLVVNRRRLLEQEQA 195 Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVG 238 +R++ L + G V G V + YGAF++L GV+G++HI++++W RV PSE+ VG Sbjct: 196 EQREKFLAQARPGDIVDGRVVRIMPYGAFMELQPGVEGMVHISELSWSRVGDPSEVTAVG 255 Query: 239 DEITVKVLKFDRERT-----RVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCF 293 + + V++L DR + ++SL KQ DPW + ++Y EG K+ G+VT D+G F Sbjct: 256 EVLPVRILAIDRTGSKTGGLKISLSAKQAAVDPWKTVGEKYKEGDKIEGKVTRCADFGAF 315 Query: 294 VEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP 353 VE+E G+EGLVH+SEM T + + V GD V VMV +D RR+SL +K + +P Sbjct: 316 VEVEPGIEGLVHISEMSHTRRVVKAEDVARPGDRVAVMVTSVDPVNRRLSLSIKAAEGDP 375 Query: 354 WQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGD 413 W A G V G ++ + DFG FI L G+ GL+ S + A +A+ + K D Sbjct: 376 WLTVANRMAVGQTVSGTVERVLDFGCFISLAPGVTGLMPRSSM-ERAADPKAMEKLKADD 434 Query: 414 EIAAVVLQVDAERERISL 431 + + ++ ++ISL Sbjct: 435 PVTVKIETINLADKKISL 452 Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats. Identities = 105/370 (28%), Positives = 166/370 (44%), Gaps = 16/370 (4%) Query: 195 VKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIV-----NVGDEITVKVLKFD 249 V+G V G + + G ++ M V+ P E V + + I + Sbjct: 124 VEGKVIETCKGGFRIQVMGQTAFCPVSQMDVHYVEKPEEFVGAVFPFLIERIEARGKNLV 183 Query: 250 RERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEM 309 R R+ L+Q + + G + GRV + YG F+E++ GVEG+VH+SE+ Sbjct: 184 VNRRRL---LEQEQAEQREKFLAQARPGDIVDGRVVRIMPYGAFMELQPGVEGMVHISEL 240 Query: 310 DWTNKNIHPSKVVNVGDVVEVMVLDIDEERRR-----ISLGLKQCKANPWQQFAETHNKG 364 W+ + PS+V VG+V+ V +L ID + ISL KQ +PW+ E + +G Sbjct: 241 SWS-RVGDPSEVTAVGEVLPVRILAIDRTGSKTGGLKISLSAKQAAVDPWKTVGEKYKEG 299 Query: 365 DRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDA 424 D++EGK+ DFG F+ ++ GI+GLVH+S++S +A + GD +A +V VD Sbjct: 300 DKIEGKVTRCADFGAFVEVEPGIEGLVHISEMSHTRRVVKAEDVARPGDRVAVMVTSVDP 359 Query: 425 ERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEAS 484 R+SL +K DP+ G V+G V V G + LA GV G + S Sbjct: 360 VNRRLSLSIKAAEGDPWLTVANRMAVGQTVSGTVERVLDFGCFISLAPGVTGLMPRSSME 419 Query: 485 RDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSN 544 R A L D V K ++ ++ ISL+ D D + Sbjct: 420 RAADPKAMEKLKADDPVTVKIETINLADKKISLA--PADAEGASDWKQYTGNEPRQAGGL 477 Query: 545 NAMAEAFKAA 554 + + +AA Sbjct: 478 GDLGQKLQAA 487 Score = 55.3 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 33/190 (17%), Positives = 63/190 (33%), Gaps = 9/190 (4%) Query: 348 QCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVR 407 + GD++ G+I +I +F DG+V +++ E Sbjct: 24 ALLESYMTDMKPEVRVGDKITGEIIAIGKDAVFFNTGTKSDGVVEKAEL----LDENGEL 79 Query: 408 EYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGAT 467 +K GD + V VD I L A + ++ V GKV G Sbjct: 80 PHKVGDRLDLYV--VDTRDGEIRLSKAMGAGSGVDMLYEAHQNRIPVEGKVIETCKGGFR 137 Query: 468 VELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADE 527 +++ G + S+ VE VG ++ + + + ++ R E ++ Sbjct: 138 IQVM-GQTAFCPVSQMDVHYVEKPEEF--VGAVFPFLIERIEARGKNLVVNRRRLLEQEQ 194 Query: 528 KDAIATVNKQ 537 + Q Sbjct: 195 AEQREKFLAQ 204 >UniRef50_Q7VJV6 Ribosomal protein S1 n=3 Tax=Helicobacter RepID=Q7VJV6_HELHP Length = 552 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 161/545 (29%), Positives = 286/545 (52%), Gaps = 16/545 (2%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDA-GLKSESAIPAEQFKNAQGEL 60 E FA LFE S K+ + G+I G +VAI + +V KSE+ + + ++ G L Sbjct: 14 EEDFAALFEASEKKADA--GAIQIGEIVAITDEYAMVALANEKSEAMLRLGEIQDDNGNL 71 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYED--AETVTGVINGKVKG 118 + D+++V + G ++ K + + ++ + + + K KG Sbjct: 72 LFNINDKIEVFVTPGRGGRPNASY-KKALKSKRIVEKIAQIADNYQDKIIEAKVIKKNKG 130 Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 GF +E +GI F+P +R GK + ++ ++++ N+++VSR+ E ++ Sbjct: 131 GFILEYDGIDVFMPRRDSAIREDDKA---IGKIYKVAIVNINKESNSIIVSRKRFFEIDD 187 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVG 238 ++ + L+ KGIVK + +G FVD+ GV+GL+H T+++ K +P++ G Sbjct: 188 KNRQNVSAKLLENDGVQKGIVKKIAPFGVFVDVYGVEGLVHYTELSHKGPINPAKNFKEG 247 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE 298 DE+ VKVL +D ++ R+SL +K LG+DPW I K G + V+N+ YG FV++ Sbjct: 248 DEVVVKVLGYDEKKRRLSLSMKALGDDPWKEIEKELEVGYSIKVSVSNIEPYGAFVDLGN 307 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFA 358 +EG +H+SE+ W HPS +NVG ++V +++ID + +R+ + LK+ P+ FA Sbjct: 308 DIEGFLHISEISWDKNIKHPSSYLNVGQEIDVEIIEIDTDNKRLRVSLKKLLDKPFVYFA 367 Query: 359 ETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAV 418 +TH G+ ++GKI ++TDFG F+ L GG+DGL+H D W+ + +K GDEI Sbjct: 368 KTHQVGEIIKGKIATLTDFGAFVNL-GGVDGLLHNEDAYWDKKSK-CKDGFKVGDEIEVK 425 Query: 419 VLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYL 478 ++++D E ER+SL K L P + +K + G + + G +++ D +E + Sbjct: 426 IIKIDKEHERVSLSKKLLEHSPAREFGKTHKVDDVARGSIIDIKDFGIFIKI-DEMEALI 484 Query: 479 RASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQE 538 R + + ED L G+E+E T +D +N + S++ + EK+ + N +E Sbjct: 485 RNEDIQPLKKED----LKAGEEIECVITHIDEENNKVRASIKRLERQKEKETLKAFNSEE 540 Query: 539 DANFS 543 Sbjct: 541 KMTLG 545 >UniRef50_C6BYI5 RNA binding S1 domain protein n=4 Tax=Desulfovibrionales RepID=C6BYI5_DESAD Length = 503 Score = 390 bits (1002), Expect = e-107, Method: Composition-based stats. Identities = 152/462 (32%), Positives = 251/462 (54%), Gaps = 15/462 (3%) Query: 2 TESFAQLFE--ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE 59 E+FA+LFE +S + G ++G V++I KD V VD G K + + ++ + +GE Sbjct: 11 EENFAELFEAFQSESNDNLQVGDQIKGTVISITKDSVFVDTGSKVDGVVDRDELTDEEGE 70 Query: 60 LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGG 119 L ++ GD V++ + ++ + +LS+ + L +AYE+ V G + KGG Sbjct: 71 LTVKDGDTVELYVISMNNNE--IVLSKAMSGA-GGLNMLREAYENKVPVEGKVAETCKGG 127 Query: 120 FTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 F V++ + F P S +D V D G F+VIK ++ N+VVSRR ++E E Sbjct: 128 FRVKMMHRKVFCPVSQIDTSFVEDAEAFVGSTHNFQVIKFEENGRNIVVSRRVLLEQEQE 187 Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVG 238 R+ ++++Q ++G V L +GAFV+L GV+G++HI++++W R P ++V G Sbjct: 188 KAREAFMQDVQPDAVMEGKVTKLMPFGAFVELTPGVEGMVHISELSWSRSAKPEDVVQPG 247 Query: 239 DEITVKVLKFDRERT----RVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFV 294 DE++V++L + + ++ L LKQL DPW I ++ G K+TG V D+G FV Sbjct: 248 DEVSVRILSMEPRKDGKGLKIGLSLKQLQADPWDEIGDKFKAGDKVTGTVVRCADFGAFV 307 Query: 295 EIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPW 354 EI G+EGLVHVSEM +T + P V+ G V VMV DID +RRI L +K +PW Sbjct: 308 EIAPGIEGLVHVSEMSYTKRVHKPEDEVSPGQEVAVMVKDIDPVKRRIGLSMKDAAGDPW 367 Query: 355 QQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDE 414 +T G VEG +++ +FGIFI L GI GL+ +S I+ + E + K GD+ Sbjct: 368 MDMEDTFKVGQEVEGTVENRAEFGIFINLAPGITGLLPMSRITRSGKQAE-LEALKPGDK 426 Query: 415 IAAVVLQVDAERERISLGV----KQLAEDPFNNWVALNKKGA 452 + + +++ +++L K ++ + + K + Sbjct: 427 VKISIEEINTTDRKVTLTAGEAQKADGDNDWKEYTKSAPKKS 468 Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 112/442 (25%), Positives = 190/442 (42%), Gaps = 19/442 (4%) Query: 105 AETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKR 163 + + G + K V+ + + + +G +E VI ++ Sbjct: 32 GDQIKGTVISITKDSVFVDTGSKVDGVVDRDELTDEEGE-LTVKDGDTVELYVISMN--- 87 Query: 164 NNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDM 223 NN +V +A+ + + EN V+G V G V + ++ + Sbjct: 88 NNEIVLSKAMSGAGGLNMLREAYENKVP---VEGKVAETCKGGFRVKMMHRKVFCPVSQI 144 Query: 224 AWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLK----QLGEDPWVAIAKRYPEGTK 279 V+ VG +V+KF+ + + + Q E A + Sbjct: 145 DTSFVEDAEAF--VGSTHNFQVIKFEENGRNIVVSRRVLLEQEQEKAREAFMQDVQPDAV 202 Query: 280 LTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDI---- 335 + G+VT L +G FVE+ GVEG+VH+SE+ W+ ++ P VV GD V V +L + Sbjct: 203 MEGKVTKLMPFGAFVELTPGVEGMVHISELSWS-RSAKPEDVVQPGDEVSVRILSMEPRK 261 Query: 336 DEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSD 395 D + +I L LKQ +A+PW + + GD+V G + DFG F+ + GI+GLVH+S+ Sbjct: 262 DGKGLKIGLSLKQLQADPWDEIGDKFKAGDKVTGTVVRCADFGAFVEIAPGIEGLVHVSE 321 Query: 396 ISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVT 455 +S+ + E G E+A +V +D + RI L +K A DP+ + K G V Sbjct: 322 MSYTKRVHKPEDEVSPGQEVAVMVKDIDPVKRRIGLSMKDAAGDPWMDMEDTFKVGQEVE 381 Query: 456 GKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAI 515 G V G + LA G+ G L S +R + L GD+V+ ++ +R + Sbjct: 382 GTVENRAEFGIFINLAPGITGLLPMSRITRSGKQAELEALKPGDKVKISIEEINTTDRKV 441 Query: 516 SLSVRAKDEADEKDAIATVNKQ 537 +L+ +AD + K Sbjct: 442 TLTAGEAQKADGDNDWKEYTKS 463 Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats. Identities = 95/381 (24%), Positives = 167/381 (43%), Gaps = 20/381 (5%) Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNV 237 A + + +NLQ G ++KG V ++T FVD G VDG++ ++ + V Sbjct: 19 EAFQSESNDNLQVGDQIKGTVISITKDSVFVDTGSKVDGVVDRDELTD---EEGELTVKD 75 Query: 238 GDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE 297 GD + + V+ + + L G + + Y + G+V G V++ Sbjct: 76 GDTVELYVISMN--NNEIVLSKAMSGAGGLNMLREAYENKVPVEGKVAETCKGGFRVKMM 133 Query: 298 EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLK----QCKANP 353 + VS++D + + ++ VG V+ +E R I + + Q + Sbjct: 134 -HRKVFCPVSQIDTS--FVEDAEAF-VGSTHNFQVIKFEENGRNIVVSRRVLLEQEQEKA 189 Query: 354 WQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGD 413 + F + +EGK+ + FG F+ L G++G+VH+S++SW+ + + + GD Sbjct: 190 REAFMQDVQPDAVMEGKVTKLMPFGAFVELTPGVEGMVHISELSWSRSAK-PEDVVQPGD 248 Query: 414 EIAAVVLQVDAERE----RISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVE 469 E++ +L ++ ++ +I L +KQL DP++ K G VTG V GA VE Sbjct: 249 EVSVRILSMEPRKDGKGLKIGLSLKQLQADPWDEIGDKFKAGDKVTGTVVRCADFGAFVE 308 Query: 470 LADGVEGYLRASEAS-RDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEK 528 +A G+EG + SE S RV +S G EV +D R I LS++ Sbjct: 309 IAPGIEGLVHVSEMSYTKRVHKPEDEVSPGQEVAVMVKDIDPVKRRIGLSMKDAAGDPWM 368 Query: 529 DAIATVNKQEDANFSNNAMAE 549 D T ++ + AE Sbjct: 369 DMEDTFKVGQEVEGTVENRAE 389 >UniRef50_D1Y3S9 30S ribosomal protein S1 n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y3S9_9BACT Length = 518 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 134/440 (30%), Positives = 249/440 (56%), Gaps = 9/440 (2%) Query: 4 SFAQLFEES-LKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA---QGE 59 A L + E G ++ G VV LVD G K E +P ++ + + Sbjct: 15 DMASLMAQYDAASEEIARGKVIEGTVVEKTDGGWLVDVGYKCEGFLPEREWTHHILVDDK 74 Query: 60 LEIQVGDEVDVALDAVEDGF-GETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 ++GD+++V + + DG + L+SR + + W LE + + +T KVKG Sbjct: 75 PAPEIGDKIEVQVTSKRDGEEAQLLVSRWRCEFDRRWAELESKVKANDIITVKGIRKVKG 134 Query: 119 GFTVELNGIRAFLPGSLVDVR-PVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESE 177 G V + F+P S + + EG+E + +++++D+++ +V+SRR++++ + Sbjct: 135 GLMVNCFNLEGFIPISHLAEEGRGVNPGRFEGEEFQVRLLEMDKRKRRLVLSRRSLLDED 194 Query: 178 NSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNV 237 SA+R++ + G + G V ++T +G FV++G +DGL+H+++++W+R E Sbjct: 195 LSAKREKFYSEVNVGDVLDGTVSSVTTFGLFVNVGPLDGLVHVSEVSWQRSSKSRETYKK 254 Query: 238 GDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE 297 GD + VKV+ D+E ++SL ++Q +PW + +R+ + + G VTN+TD+G FVE+E Sbjct: 255 GDAVKVKVIGIDKENNKISLSIRQAQGNPWDTVMERWQKDQQTKGVVTNVTDFGAFVEVE 314 Query: 298 EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQF 357 G+EGL+H+ ++ W+ + HP +V++ G VE +VL+ID E++R+SLG KQ +PW+ Sbjct: 315 PGIEGLIHIGDLSWS-RIKHPREVLHKGQEVETIVLEIDPEKKRMSLGYKQLH-DPWKGI 372 Query: 358 AETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAA 417 E + KG + K+ + DFG F+ ++ G++GL+H+S +S + E+ ++G E+ A Sbjct: 373 EERYTKGQDITVKVVRLADFGAFVEIEKGVEGLIHISQLSTHRV-EKPGDVLQEGQEVTA 431 Query: 418 VVLQVDAERERISLGVKQLA 437 VL+V+ RI L + + Sbjct: 432 RVLEVNPAERRIRLSISAIE 451 Score = 312 bits (800), Expect = 2e-83, Method: Composition-based stats. Identities = 135/461 (29%), Positives = 220/461 (47%), Gaps = 19/461 (4%) Query: 85 SREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRPVRD 143 S + A + + + + G + K GG+ V++ FLP + D Sbjct: 13 SMDMASLMAQYDAASEEIARGKVIEGTVVEKTDGGWLVDVGYKCEGFLPEREWTHHILVD 72 Query: 144 --TLHLEGKELEFKVI-KLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVK 200 G ++E +V K D + ++VSR E +L ++ + Sbjct: 73 DKPAPEIGDKIEVQVTSKRDGEEAQLLVSR---WRCEFDRRWAELESKVKANDIITVKGI 129 Query: 201 NLTDYGAFVDLGGVDGLLHITDMAW-KRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGL 259 G V+ ++G + I+ +A R +P G+E V++L+ D+ + R+ L Sbjct: 130 RKVKGGLMVNCFNLEGFIPISHLAEEGRGVNPGRF--EGEEFQVRLLEMDKRKRRLVLSR 187 Query: 260 KQLGEDPW----VAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKN 315 + L ++ G L G V+++T +G FV + ++GLVHVSE+ W ++ Sbjct: 188 RSLLDEDLSAKREKFYSEVNVGDVLDGTVSSVTTFGLFVNVGP-LDGLVHVSEVSW-QRS 245 Query: 316 IHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSIT 375 + GD V+V V+ ID+E +ISL ++Q + NPW E K + +G + ++T Sbjct: 246 SKSRETYKKGDAVKVKVIGIDKENNKISLSIRQAQGNPWDTVMERWQKDQQTKGVVTNVT 305 Query: 376 DFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQ 435 DFG F+ ++ GI+GL+H+ D+SW+ + KG E+ +VL++D E++R+SLG KQ Sbjct: 306 DFGAFVEVEPGIEGLIHIGDLSWSRI-KHPREVLHKGQEVETIVLEIDPEKKRMSLGYKQ 364 Query: 436 LAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVL 495 L DP+ KG +T KV + GA VE+ GVEG + S+ S RVE VL Sbjct: 365 L-HDPWKGIEERYTKGQDITVKVVRLADFGAFVEIEKGVEGLIHISQLSTHRVEKPGDVL 423 Query: 496 SVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNK 536 G EV A+ V+ R I LS+ A EA EK A N Sbjct: 424 QEGQEVTARVLEVNPAERRIRLSISAI-EAGEKAAERGKNS 463 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 94/377 (24%), Positives = 170/377 (45%), Gaps = 13/377 (3%) Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVG 238 A+ D E + G ++G V TD G VD+G +G L + + +G Sbjct: 21 AQYDAASEEIARGKVIEGTVVEKTDGGWLVDVGYKCEGFLPEREWTHHILVDDKPAPEIG 80 Query: 239 DEITVKVLKF-DRERTRVSLGL-KQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI 296 D+I V+V D E ++ + + + W + + +T + G V Sbjct: 81 DKIEVQVTSKRDGEEAQLLVSRWRCEFDRRWAELESKVKANDIITVKGIRKVKGGLMVNC 140 Query: 297 EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQ 356 +EG + +S + + ++P + G+ +V +L++D+ +RR+ L + Sbjct: 141 F-NLEGFIPISHLAEEGRGVNPGRF--EGEEFQVRLLEMDKRKRRLVLSRRSLLDEDLSA 197 Query: 357 FAETH----NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKG 412 E N GD ++G + S+T FG+F+ + +DGLVH+S++SW + + + YKKG Sbjct: 198 KREKFYSEVNVGDVLDGTVSSVTTFGLFVNVGP-LDGLVHVSEVSWQRSSK-SRETYKKG 255 Query: 413 DEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELAD 472 D + V+ +D E +ISL ++Q +P++ + +K G VT V GA VE+ Sbjct: 256 DAVKVKVIGIDKENNKISLSIRQAQGNPWDTVMERWQKDQQTKGVVTNVTDFGAFVEVEP 315 Query: 473 GVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIA 532 G+EG + + S R++ VL G EVE +D + + +SL + K Sbjct: 316 GIEGLIHIGDLSWSRIKHPREVLHKGQEVETIVLEIDPEKKRMSLGYKQLH-DPWKGIEE 374 Query: 533 TVNKQEDANFSNNAMAE 549 K +D +A+ Sbjct: 375 RYTKGQDITVKVVRLAD 391 >UniRef50_A5CF24 30S ribosomal protein S1 n=2 Tax=Orientia tsutsugamushi RepID=A5CF24_ORITB Length = 507 Score = 387 bits (993), Expect = e-106, Method: Composition-based stats. Identities = 190/469 (40%), Positives = 284/469 (60%), Gaps = 33/469 (7%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE 61 ++F +LF + + + + G++V+G VV ID +VV+VD LK+E IP +FK A Sbjct: 37 QDNFDELFNK-ITNEQIKAGTVVKGKVVEIDDEVVIVDIKLKNEGRIPLSEFKLASDVPL 95 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 Q+GD VDV ++ +E G T+LSREKA R EAW L++A ++ V GVI GKVKGGFT Sbjct: 96 PQIGDLVDVYVEKIEGRNGCTVLSREKALREEAWSVLDEAQKNGSLVDGVIFGKVKGGFT 155 Query: 122 VELNGIRAFLPGSLVDVR-PVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 V+L+G+ AFLPGS VDVR P+++ L F+++K+D+K N+VVSRRAV+E + Sbjct: 156 VDLSGVVAFLPGSQVDVRRPIKNITPLMNIVQPFQILKMDKKLGNIVVSRRAVLEEARAG 215 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG---------VDGLLHITDMAWKRVKHP 231 R ++L + GM + G+VK++ YGAF++L G VDGLLH ++ W+++ HP Sbjct: 216 IRQEVLSKIHVGMILNGVVKSIVYYGAFIELTGSDELTFDVKVDGLLHSINILWRKINHP 275 Query: 232 SEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYG 291 E + +G ++ V V+ D ++SLG+KQL +PW I G G+V ++ +YG Sbjct: 276 GEELQIGQQVRVVVIGIDISTGQISLGMKQLSANPWDDIENSLQIGDIKVGKVKSIAEYG 335 Query: 292 CFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKA 351 F+E+ + +EGL H + W N +P K + +G V +LDID+ER RISL LK CK Sbjct: 336 AFIEVTKDLEGLCHSGHLGWEKINQNPKKSLTIGQEVVFKILDIDKERHRISLSLKLCKP 395 Query: 352 NPWQQFAETHNKGDRVEGKIKSITDFGIFI-----------GLDGG----------IDGL 390 NPW+ AE + G + +++IT+FG+F+ +DG IDG+ Sbjct: 396 NPWEVLAEKYQVGTVIRAPLRNITNFGMFVALSVTTNAVKYEIDGKEYEIGEMTYQIDGM 455 Query: 391 VHLSDI-SWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAE 438 +H SDI +++ Y KGDEI +VL VD E+ERI+LG+KQLA+ Sbjct: 456 IHESDILKHGDTNSNSLKNYTKGDEIECMVLAVDVEKERINLGIKQLAD 504 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 105/459 (22%), Positives = 194/459 (42%), Gaps = 44/459 (9%) Query: 103 EDAETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQ 161 + V G + V++ +P S + L G ++ V K++ Sbjct: 53 KAGTVVKGKVVEIDDEVVIVDIKLKNEGRIPLSEFKLA-SDVPLPQIGDLVDVYVEKIEG 111 Query: 162 KRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHIT 221 + V+SR + E + D+ +N G V G++ G VDL GV L + Sbjct: 112 RNGCTVLSREKALREEAWSVLDEAQKN---GSLVDGVIFGKVKGGFTVDLSGVVAFLPGS 168 Query: 222 DMAWKR-VKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPW----VAIAKRYPE 276 + +R +K+ + ++N+ ++LK D++ + + + + E+ + + Sbjct: 169 QVDVRRPIKNITPLMNIVQ--PFQILKMDKKLGNIVVSRRAVLEEARAGIRQEVLSKIHV 226 Query: 277 GTKLTGRVTNLTDYGCFVEI--------EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVV 328 G L G V ++ YG F+E+ + V+GL+H + W K HP + + +G V Sbjct: 227 GMILNGVVKSIVYYGAFIELTGSDELTFDVKVDGLLHSINILW-RKINHPGEELQIGQQV 285 Query: 329 EVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGID 388 V+V+ ID +ISLG+KQ ANPW + GD GK+KSI ++G FI + ++ Sbjct: 286 RVVVIGIDISTGQISLGMKQLSANPWDDIENSLQIGDIKVGKVKSIAEYGAFIEVTKDLE 345 Query: 389 GLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALN 448 GL H + W + + G E+ +L +D ER RISL +K +P+ Sbjct: 346 GLCHSGHLGWEKINQNPKKSLTIGQEVVFKILDIDKERHRISLSLKLCKPNPWEVLAEKY 405 Query: 449 KKGAIVTGKVTAVDAKGATV---------------------ELADGVEGYLRASEASR-- 485 + G ++ + + G V E+ ++G + S+ + Sbjct: 406 QVGTVIRAPLRNITNFGMFVALSVTTNAVKYEIDGKEYEIGEMTYQIDGMIHESDILKHG 465 Query: 486 DRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDE 524 D ++ + GDE+E VD + I+L ++ + Sbjct: 466 DTNSNSLKNYTKGDEIECMVLAVDVEKERINLGIKQLAD 504 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 87/396 (21%), Positives = 170/396 (42%), Gaps = 24/396 (6%) Query: 157 IKLDQKRNNVVVSRRAVIESENSAERDQLL--ENLQEGMEVKGIVKNLTDYGAFVDLG-G 213 +++ K+ + I +N E + E ++ G VKG V + D VD+ Sbjct: 18 TQINLKQRFIPTISSKSIVQDNFDELFNKITNEQIKAGTVVKGKVVEIDDEVVIVDIKLK 77 Query: 214 VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGL-KQLGEDPWVAIAK 272 +G + +++ +GD + V V K + L K L E+ W + + Sbjct: 78 NEGRIPLSEFKLASDVPLP---QIGDLVDVYVEKIEGRNGCTVLSREKALREEAWSVLDE 134 Query: 273 RYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMV 332 G+ + G + G V++ GV + S++D + + ++N+ + Sbjct: 135 AQKNGSLVDGVIFGKVKGGFTVDLS-GVVAFLPGSQVDVRRPIKNITPLMNIVQP--FQI 191 Query: 333 LDIDEERRRISLGLK----QCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDG--- 385 L +D++ I + + + +A Q+ + G + G +KSI +G FI L G Sbjct: 192 LKMDKKLGNIVVSRRAVLEEARAGIRQEVLSKIHVGMILNGVVKSIVYYGAFIELTGSDE 251 Query: 386 -----GIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDP 440 +DGL+H +I W E + G ++ VV+ +D +ISLG+KQL+ +P Sbjct: 252 LTFDVKVDGLLHSINILWRKIN-HPGEELQIGQQVRVVVIGIDISTGQISLGMKQLSANP 310 Query: 441 FNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRV-EDATLVLSVGD 499 +++ + G I GKV ++ GA +E+ +EG + +++ ++ L++G Sbjct: 311 WDDIENSLQIGDIKVGKVKSIAEYGAFIEVTKDLEGLCHSGHLGWEKINQNPKKSLTIGQ 370 Query: 500 EVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVN 535 EV K +D++ ISLS++ + Sbjct: 371 EVVFKILDIDKERHRISLSLKLCKPNPWEVLAEKYQ 406 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 58/312 (18%), Positives = 112/312 (35%), Gaps = 25/312 (8%) Query: 256 SLGLKQLGEDPWVAIAK-----RYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMD 310 ++ K + +D + + + GT + G+V + D V+I+ EG + +SE Sbjct: 29 TISSKSIVQDNFDELFNKITNEQIKAGTVVKGKVVEIDDEVVIVDIKLKNEGRIPLSEFK 88 Query: 311 WTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGL-KQCKANPWQQFAETHNKGDRVEG 369 + P +GD+V+V V I+ L K + W E G V+G Sbjct: 89 LASDVPLP----QIGDLVDVYVEKIEGRNGCTVLSREKALREEAWSVLDEAQKNGSLVDG 144 Query: 370 KIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERI 429 I G + L G+ + S + + +L++D + I Sbjct: 145 VIFGKVKGGFTVDL-SGVVAFLPGSQVDVRRPIKNITPLMNIVQPFQ--ILKMDKKLGNI 201 Query: 430 SLGVKQLAEDPF----NNWVALNKKGAIVTGKVTAVDAKGATVELAD--------GVEGY 477 + + + E+ ++ G I+ G V ++ GA +EL V+G Sbjct: 202 VVSRRAVLEEARAGIRQEVLSKIHVGMILNGVVKSIVYYGAFIELTGSDELTFDVKVDGL 261 Query: 478 LRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQ 537 L + ++ L +G +V G+D ISL ++ D ++ Sbjct: 262 LHSINILWRKINHPGEELQIGQQVRVVVIGIDISTGQISLGMKQLSANPWDDIENSLQIG 321 Query: 538 EDANFSNNAMAE 549 + ++AE Sbjct: 322 DIKVGKVKSIAE 333 >UniRef50_Q1V1Q4 30S ribosomal protein S1 n=3 Tax=Candidatus Pelagibacter RepID=Q1V1Q4_PELUB Length = 576 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 178/566 (31%), Positives = 312/566 (55%), Gaps = 13/566 (2%) Query: 2 TESFAQLFEESL-KEIETRPGSIVRGVVVAIDKDVVLVDA-GLKSESAIPAEQFKNAQGE 59 ++ F QL K G I+ GVV + + V ++ GLKSE + + K+ Sbjct: 12 SKEFEQLLNSQFTKTANLEEGKIITGVVNKVTDNFVFLEVPGLKSEPILDINELKSMGML 71 Query: 60 LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGG 119 + +VG+++ V L+ +ED GE L+S KA++ + W L +AYE E + G I G+VKGG Sbjct: 72 DKAKVGEKISVLLERLEDKKGEVLVSASKAQKIQGWDKLVEAYEKNEPIMGKITGRVKGG 131 Query: 120 FTVEL--NGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESE 177 VE G FLPGS + +P++D HL + +F +IKLD+ R N VSRR +I S Sbjct: 132 CIVEHIDTGSLMFLPGSQISDKPLKDISHLMNEPQKFALIKLDKVRGNACVSRREIISSF 191 Query: 178 NSAERDQLLENLQEGMEVKG-IVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIV 235 ++ +++E + G +KG VK + +G F + G +D L+H+ ++++ RV HP E+ Sbjct: 192 KKEDKIKIVEKFKVGDIIKGAEVKGYSSFGCFFSVNGELDVLVHLQEISYSRVNHPDEVF 251 Query: 236 NVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVE 295 +G++ +KV+ D E+ +V +KQL DP+ I+ Y +V L D+G F E Sbjct: 252 TIGEKHDLKVISVDLEKLQVGCSVKQLTPDPFENISN-YELNKIYKVKVVKLMDFGAFCE 310 Query: 296 IEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQ 355 +E+G+ L+H SE+ WT KNI K+ VGD ++ ++ +ID+E+RR+++ + NP++ Sbjct: 311 LEKGLSTLLHSSELSWTKKNISAKKMFKVGDEIDCVITEIDKEKRRVAISHRLTTDNPFE 370 Query: 356 QFAETHNKGDRVEGKIKSITDFGIFIGLDG-GIDGLVHLSDISWNVAGEEAVREYKKGDE 414 F +T+ G VEG++ S ++ IF+ +DG ID +H +D+++ GEE + +YK GD+ Sbjct: 371 TFEKTYPIGSEVEGEVASKNEYSIFLKVDGLDIDAFLHCNDLTYLNNGEEELAKYKIGDK 430 Query: 415 IAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGV 474 + VL+V A +++ +G++Q DPF+ W K +T K+ + D KG V +G Sbjct: 431 LKVKVLEVKAAEQKVRVGLRQTQPDPFD-WFNDKKVKQTITVKIISTDNKGLVVR-PEGC 488 Query: 475 EG--YLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIA 532 E ++ S + + + + G+ ++ +D R +LS++ +E + K A+ Sbjct: 489 EMDFIIKKSAIAINAADARPARFTGGERIDCAIQELDIDKRKATLSIKLLEEIERKVALD 548 Query: 533 TVNKQEDA-NFSNNAMAEAFKAAKGE 557 T + N +++++ + K E Sbjct: 549 TYGSEASGKNLPFSSLSDDLEKKKKE 574 >UniRef50_C0QM45 RpsA1 n=2 Tax=Desulfobacteraceae RepID=C0QM45_DESAH Length = 486 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 153/451 (33%), Positives = 247/451 (54%), Gaps = 13/451 (2%) Query: 4 SFAQLFEESLKEI--ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE 61 SFA++F EI + R G + G +++I ++ V + G KS+ + + + GE Sbjct: 18 SFAEMFASYDAEINHDIRQGDKIDGKIISIGQNAVYISTGAKSDGVVDKAELLDKNGEFH 77 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 VGDE+ + + ++ E LS+ + A LE+A V G + G +KGGF+ Sbjct: 78 HAVGDEISLYVVSMN--ESEITLSKSLSGAGTA-TMLEEASFTGTPVEGKVAGTIKGGFS 134 Query: 122 VELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 V + G RAF P S +D++ + DT G F + + ++ N+VVSRR ++ EN Sbjct: 135 VTIMGKRAFCPVSQMDIKYIEDTESYVGSTFNFIITRFEEGGRNIVVSRRDLLNLENKDR 194 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 +D + +EG + G V L YGAF++L GV+G+ HI++++W RV E+V G+ Sbjct: 195 QDAFFKEAKEGDILTGSVTKLMPYGAFIELVPGVEGMAHISELSWSRVDKAEEVVKQGET 254 Query: 241 ITVKVLKFDRERT----RVSLGLKQ-LGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVE 295 + VK+LK + + ++SL +KQ L EDPW + A G +LTG+V L +G FVE Sbjct: 255 VKVKLLKIETKEGADMPKISLSIKQALSEDPWDSQAGTIAPGDQLTGKVVRLAPFGAFVE 314 Query: 296 IEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQ 355 I G++GLVH+SEM T + + VV +G++V+V+V DID E+RRISL +K +PW Sbjct: 315 IAPGMDGLVHLSEMSHTRRIVKADDVVTLGEMVQVVVKDIDIEKRRISLSIKDALGDPWA 374 Query: 356 QFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEI 415 AE + G VE ++ FGIF+ L+ G+ GL+ S ++ + K GD++ Sbjct: 375 GIAEKYAPGTIVETTMEKREQFGIFLSLEPGVTGLLPAS-VASKASKPSDYDSLKPGDKV 433 Query: 416 AAVVLQVDAERERISLGVKQLAE-DPFNNWV 445 +V D E+ RISL ++ + D + + Sbjct: 434 TVMVESADEEKRRISLAPPEMKDSDDWRKFA 464 Score = 264 bits (674), Expect = 8e-69, Method: Composition-based stats. Identities = 116/427 (27%), Positives = 184/427 (43%), Gaps = 19/427 (4%) Query: 138 VRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKG 197 + + H G E+ V+ +++ + +S+ + + G V+G Sbjct: 70 LDKNGEFHHAVGDEISLYVVSMNESE--ITLSKSLSGAGTATMLEEASFT----GTPVEG 123 Query: 198 IVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSL 257 V G V + G ++ M K ++ VG + +F+ + + Sbjct: 124 KVAGTIKGGFSVTIMGKRAFCPVSQMDIKYIEDTESY--VGSTFNFIITRFEEGGRNIVV 181 Query: 258 GLKQLG----EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTN 313 + L +D A K EG LTG VT L YG F+E+ GVEG+ H+SE+ W+ Sbjct: 182 SRRDLLNLENKDRQDAFFKEAKEGDILTGSVTKLMPYGAFIELVPGVEGMAHISELSWSR 241 Query: 314 KNIHPSKVVNVGDVVEVMVLDIDEERR----RISLGLKQC-KANPWQQFAETHNKGDRVE 368 + +VV G+ V+V +L I+ + +ISL +KQ +PW A T GD++ Sbjct: 242 VD-KAEEVVKQGETVKVKLLKIETKEGADMPKISLSIKQALSEDPWDSQAGTIAPGDQLT 300 Query: 369 GKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERER 428 GK+ + FG F+ + G+DGLVHLS++S +A G+ + VV +D E+ R Sbjct: 301 GKVVRLAPFGAFVEIAPGMDGLVHLSEMSHTRRIVKADDVVTLGEMVQVVVKDIDIEKRR 360 Query: 429 ISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRV 488 ISL +K DP+ G IV + + G + L GV G L AS AS+ Sbjct: 361 ISLSIKDALGDPWAGIAEKYAPGTIVETTMEKREQFGIFLSLEPGVTGLLPASVASKASK 420 Query: 489 EDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMA 548 L GD+V D + R ISL+ ++D+ A K + M Sbjct: 421 PSDYDSLKPGDKVTVMVESADEEKRRISLAPPEMKDSDDWRKFAPAQKAPMGDMGALLM- 479 Query: 549 EAFKAAK 555 EA K K Sbjct: 480 EALKKKK 486 Score = 194 bits (493), Expect = 8e-48, Method: Composition-based stats. Identities = 87/386 (22%), Positives = 173/386 (44%), Gaps = 21/386 (5%) Query: 170 RRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRV 228 A ++ ++ ++++G ++ G + ++ ++ G DG++ ++ Sbjct: 15 EEASFAEMFASYDAEINHDIRQGDKIDGKIISIGQNAVYISTGAKSDGVVDKAELLD--- 71 Query: 229 KHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLT 288 K+ VGDEI++ V+ + + ++L G + + GT + G+V Sbjct: 72 KNGEFHHAVGDEISLYVVSMNE--SEITLSKSLSGAGTATMLEEASFTGTPVEGKVAGTI 129 Query: 289 DYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQ 348 G V I G VS+MD K I ++ VG ++ +E R I + + Sbjct: 130 KGGFSVTIM-GKRAFCPVSQMD--IKYIEDTESY-VGSTFNFIITRFEEGGRNIVVSRRD 185 Query: 349 CK----ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEE 404 + F + +GD + G + + +G FI L G++G+ H+S++SW+ ++ Sbjct: 186 LLNLENKDRQDAFFKEAKEGDILTGSVTKLMPYGAFIELVPGVEGMAHISELSWSRV-DK 244 Query: 405 AVREYKKGDEIAAVVLQVDAERE----RISLGVKQ-LAEDPFNNWVALNKKGAIVTGKVT 459 A K+G+ + +L+++ + +ISL +KQ L+EDP+++ G +TGKV Sbjct: 245 AEEVVKQGETVKVKLLKIETKEGADMPKISLSIKQALSEDPWDSQAGTIAPGDQLTGKVV 304 Query: 460 AVDAKGATVELADGVEGYLRASEASR-DRVEDATLVLSVGDEVEAKFTGVDRKNRAISLS 518 + GA VE+A G++G + SE S R+ A V+++G+ V+ +D + R ISLS Sbjct: 305 RLAPFGAFVEIAPGMDGLVHLSEMSHTRRIVKADDVVTLGEMVQVVVKDIDIEKRRISLS 364 Query: 519 VRAKDEADEKDAIATVNKQEDANFSN 544 ++ + Sbjct: 365 IKDALGDPWAGIAEKYAPGTIVETTM 390 >UniRef50_B5YEY5 Ribosomal protein S1, putative n=2 Tax=Dictyoglomus RepID=B5YEY5_DICT6 Length = 552 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 141/549 (25%), Positives = 272/549 (49%), Gaps = 11/549 (2%) Query: 13 LKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEI--QVGDEVDV 70 ++ ++V G ++ I KD + +D G K ++ +P + Q D + V Sbjct: 11 ETDLSISIDTLVYGNILNITKDGLWLDIGKKYDAFLPYNELSKELKAKLEKKQEIDSIPV 70 Query: 71 ALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNG-IRA 129 + V G +S +KA ++ W L AYE+ + + G + GF +E+N + Sbjct: 71 VIKHVNYKDGVITVSNKKAVENKIWEELLWAYENNQPIQGKVINYNGRGFILEINNEVEG 130 Query: 130 FLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENL 189 F+P +DV P++ + + +E K+ +++ ++N +++S R ++E + ER L E + Sbjct: 131 FIPAKEIDVPPIKPPKYYINRRIEGKIKRINPEKNQLIISARELLEQKQEEERSNLWEKI 190 Query: 190 QEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKF 248 + V+G + + + VDLG G+ G++ +++W +K+ N GD + +VL Sbjct: 191 KNSQIVRGRIIKVDEDKLTVDLGLGIIGIVEKDEISWFPIKNIRRYYNTGDIVKARVLSL 250 Query: 249 DRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSE 308 D L +KQ +PW ++YPEG+ + + ++ G V++ + + G V +SE Sbjct: 251 DENSRTAQLSIKQAQPNPWSLFKEKYPEGSIIKAEIIKIS-GGIVVKV-DNLIGYVPMSE 308 Query: 309 MDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVE 368 + W + + VGD V+ VL +D+ ++I L +KQ + NPW+ + + G+ V Sbjct: 309 ISWG-RPQDVKNSLKVGDKVKAKVLSVDDLNQKIFLSIKQVEPNPWEVIDQNYKIGEIVS 367 Query: 369 GKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERER 428 GK+ +ITDFGIFI + G++GL+ ISW +K GD I A ++++D E ++ Sbjct: 368 GKVTNITDFGIFIEIKPGLEGLIPRKLISWERIS-NISDIFKPGDFIEAKIIEIDKENKK 426 Query: 429 ISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRV 488 ++L + L +DP+ + ++G + G++ G VEL G+EG+L ++ + ++ Sbjct: 427 LTLSRRDLLKDPWEDIDEKYREGQNIKGRIIEKLKDGYIVELEPGIEGFLPYTQINFEK- 485 Query: 489 EDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMA 548 E+ +EVEAK ++ + R I+LS++A + + + + Sbjct: 486 ENEIQGFKENEEVEAKIVKINPRFRRITLSIKALIKEKLDQEMKKYLSEYA--PPPLTLG 543 Query: 549 EAFKAAKGE 557 E K E Sbjct: 544 ELLKLKNNE 552 Score = 178 bits (451), Expect = 7e-43, Method: Composition-based stats. Identities = 83/361 (22%), Positives = 158/361 (43%), Gaps = 13/361 (3%) Query: 174 IESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPS 232 +E + + ++ ++ V G + N+T G ++D+G D L +++ + Sbjct: 1 MEELSDIKLEETDLSISIDTLVYGNILNITKDGLWLDIGKKYDAFLPYNELSKELKAKLE 60 Query: 233 EIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDP-WVAIAKRYPEGTKLTGRVTNLTDYG 291 + + D I V + + + +++ K+ E+ W + Y + G+V N G Sbjct: 61 KKQEI-DSIPVVIKHVNYKDGVITVSNKKAVENKIWEELLWAYENNQPIQGKVINYNGRG 119 Query: 292 CFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKA 351 +EI VEG + E+D I P K + +E + I+ E+ ++ + ++ Sbjct: 120 FILEINNEVEGFIPAKEID--VPPIKPPKYY-INRRIEGKIKRINPEKNQLIISARELLE 176 Query: 352 NPWQQF----AETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVR 407 ++ E V G+I + + + + L GI G+V +ISW + R Sbjct: 177 QKQEEERSNLWEKIKNSQIVRGRIIKVDEDKLTVDLGLGIIGIVEKDEISW-FPIKNIRR 235 Query: 408 EYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGAT 467 Y GD + A VL +D L +KQ +P++ + +G+I+ ++ + G Sbjct: 236 YYNTGDIVKARVLSLDENSRTAQLSIKQAQPNPWSLFKEKYPEGSIIKAEIIKI--SGGI 293 Query: 468 VELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADE 527 V D + GY+ SE S R +D L VGD+V+AK VD N+ I LS++ + Sbjct: 294 VVKVDNLIGYVPMSEISWGRPQDVKNSLKVGDKVKAKVLSVDDLNQKIFLSIKQVEPNPW 353 Query: 528 K 528 + Sbjct: 354 E 354 Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats. Identities = 55/262 (20%), Positives = 125/262 (47%), Gaps = 17/262 (6%) Query: 12 SLKEIETRPGSIVRGVVVAIDKDVVL-VDAGLKSESAIPAEQFKNAQGEL---EIQVGDE 67 SL + + GSI++ ++ I +V+ VD +P + + + ++VGD+ Sbjct: 270 SLFKEKYPEGSIIKAEIIKISGGIVVKVD---NLIGYVPMSEISWGRPQDVKNSLKVGDK 326 Query: 68 VDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-G 126 V + +V+D + LS ++ + W +++ Y+ E V+G + G +E+ G Sbjct: 327 VKAKVLSVDDLNQKIFLSIKQVE-PNPWEVIDQNYKIGEIVSGKVTNITDFGIFIEIKPG 385 Query: 127 IRAFLPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQ 184 + +P L+ + + + G +E K+I++D++ + +SRR +++ + Sbjct: 386 LEGLIPRKLISWERISNISDIFKPGDFIEAKIIEIDKENKKLTLSRRDLLKD----PWED 441 Query: 185 LLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITV 243 + E +EG +KG + G V+L G++G L T + +++ + +E+ Sbjct: 442 IDEKYREGQNIKGRIIEKLKDGYIVELEPGIEGFLPYTQINFEKENEI-QGFKENEEVEA 500 Query: 244 KVLKFDRERTRVSLGLKQLGED 265 K++K + R++L +K L ++ Sbjct: 501 KIVKINPRFRRITLSIKALIKE 522 >UniRef50_Q8RI52 4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=19 Tax=Fusobacterium RepID=ISPH_FUSNN Length = 827 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 148/521 (28%), Positives = 270/521 (51%), Gaps = 18/521 (3%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDA-GLKSESAIPAEQFKNAQGEL 60 F+ + EE L E R V GV+ ++D++ +D G ++ + ++ K+ Sbjct: 294 QNEFSLMLEEFLPNQEKR----VEGVIESMDQNFSYLDVPGERTAVRVRTDELKD----- 344 Query: 61 EIQVGDEVDVALDAV---EDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVK 117 +VGD V+V + + +D SR K + + W +E ++++ + + K+K Sbjct: 345 -YKVGDTVEVLITGLSEEDDDQEYITASRRKIEVEKNWEKIEDSFKNKTILDAKVTKKIK 403 Query: 118 GGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESE 177 GG+ VE FLP SL ++ + ++ + ++ K IK+D K ++ Sbjct: 404 GGYLVEAFLYPGFLPNSLSEISDSEEKVNGKKIQVIVKDIKMDPKDKKNR-KITYSVKDI 462 Query: 178 NSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNV 237 AE+++ L G V +V + D+G VD+ + G +HI++++WKR+ S+ V Sbjct: 463 RLAEQEKEFAGLAVGQIVDCVVTEVLDFGLAVDINTLKGFIHISEVSWKRLDKLSDNYKV 522 Query: 238 GDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE 297 GD+I V+ D + V L +K+L EDPW +A + ++ G VT + YG FVEI+ Sbjct: 523 GDKIKAVVVSLDEAKRNVKLSIKKLEEDPWATVANEFKVDDEIEGIVTKVLPYGAFVEIK 582 Query: 298 EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQF 357 GVEGLVH+S+ WT K ++ + V + ++V + D+ E R++ LG+KQ ANPW+ Sbjct: 583 PGVEGLVHISDFSWTKKKVNVADYVKEREKIKVRITDLHPEDRKLKLGIKQLVANPWETA 642 Query: 358 AETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAA 417 + ++GK+ + FGIF+ + GID VH SD +W E + +++ G+E+ Sbjct: 643 EKDFAIDTVIKGKVVEVKPFGIFVEIADGIDAFVHSSDYNW---VGEEIPKFEIGNEVEL 699 Query: 418 VVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGY 477 + ++D ++I +K L + P+ + + K G V K+ V G +EL G++G+ Sbjct: 700 KITELDLNNKKIKGSLKALRKSPWEHAMEEYKVGTTVEKKIKTVADFGLFIELIKGIDGF 759 Query: 478 LRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLS 518 + AS++ +++ S GD V+A+ V+++ + I LS Sbjct: 760 IPTQFASKEFIKNIRDKFSEGDVVKAQVVEVNKETQKIKLS 800 >UniRef50_C0GUF0 RNA binding S1 domain protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GUF0_9DELT Length = 476 Score = 376 bits (967), Expect = e-103, Method: Composition-based stats. Identities = 155/458 (33%), Positives = 242/458 (52%), Gaps = 13/458 (2%) Query: 2 TESFAQLFEESLKEI--ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE 59 +SFA++ ES E E PG VRG +++I KD V VD G K++ E +++G Sbjct: 7 EQSFARMLAESEMESGPELEPGDRVRGKIISIGKDHVYVDTGTKTDGVADREDLLDSEGN 66 Query: 60 LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGG 119 L ++ GD V++ + + G S H L +A E V G + KGG Sbjct: 67 LALEEGDSVELFVVSRHQGEIRLASS---FGAHGGVQQLMQAMEQEIPVQGKVKETCKGG 123 Query: 120 FTVELNGIR-AFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 F V++ G AF P S +D R V D+ L G+ + F V +++ N+VVSRRA+ + E Sbjct: 124 FRVQVMGNHLAFCPMSQMDNRMVEDSQSLVGESMTFLVSRVEANGRNIVVSRRALKDKEQ 183 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNV 237 + + N + G ++G V + YG FV++ G++GL+HI++M+W R P EIV+V Sbjct: 184 AESLHEFSRNYKPGDVLQGTVTRVEPYGVFVEVAPGLEGLVHISEMSWSRSLAPEEIVSV 243 Query: 238 GDEITVKVLKF---DRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFV 294 GD ++V +L D+ + R+ L +KQ DPW +I + + G+ + G VT + +G FV Sbjct: 244 GDTVSVHLLGIEEKDKGQVRIGLSMKQAQADPWESITENFEPGSVVEGVVTRVAPFGAFV 303 Query: 295 EIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPW 354 EI G+EGLVHVSEM + + P + V G V V V ID RRISL ++ + +PW Sbjct: 304 EISPGLEGLVHVSEMSYLKRVSKPEEEVQPGQKVRVKVKGIDSLERRISLSMRDAQGDPW 363 Query: 355 QQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDE 414 + + + KG VEGK++ DFG+ + L+ G+ GLV S + N + ++ K GD Sbjct: 364 EGVSTRYEKGTLVEGKMEKQEDFGMLVALEPGVVGLVPRSILHQN--QDSSLTNKKPGDR 421 Query: 415 IAAVVLQVDAERERISL-GVKQLAEDPFNNWVALNKKG 451 + V VD RISL + + + ++ G Sbjct: 422 VNVAVESVDEANRRISLQPADSVQSEEWQSYAPARDNG 459 Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats. Identities = 107/380 (28%), Positives = 184/380 (48%), Gaps = 17/380 (4%) Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEI 241 QL++ +++ + V+G VK G V + G ++ M + V+ + VG+ + Sbjct: 100 QQLMQAMEQEIPVQGKVKETCKGGFRVQVMGNHLAFCPMSQMDNRMVEDSQSL--VGESM 157 Query: 242 TVKVLKFDRERTRVSLGLKQLGE----DPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE 297 T V + + + + + L + + ++ Y G L G VT + YG FVE+ Sbjct: 158 TFLVSRVEANGRNIVVSRRALKDKEQAESLHEFSRNYKPGDVLQGTVTRVEPYGVFVEVA 217 Query: 298 EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERR---RISLGLKQCKANPW 354 G+EGLVH+SEM W+ +++ P ++V+VGD V V +L I+E+ + RI L +KQ +A+PW Sbjct: 218 PGLEGLVHISEMSWS-RSLAPEEIVSVGDTVSVHLLGIEEKDKGQVRIGLSMKQAQADPW 276 Query: 355 QQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDE 414 + E G VEG + + FG F+ + G++GLVH+S++S+ + E + G + Sbjct: 277 ESITENFEPGSVVEGVVTRVAPFGAFVEISPGLEGLVHVSEMSYLKRVSKPEEEVQPGQK 336 Query: 415 IAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGV 474 + V +D+ RISL ++ DP+ +KG +V GK+ + G V L GV Sbjct: 337 VRVKVKGIDSLERRISLSMRDAQGDPWEGVSTRYEKGTLVEGKMEKQEDFGMLVALEPGV 396 Query: 475 EGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATV 534 G + S +++ T GD V VD NR ISL +++E + A Sbjct: 397 VGLVPRSILHQNQDSSLTNK-KPGDRVNVAVESVDEANRRISLQPADSVQSEEWQSYA-- 453 Query: 535 NKQEDANFSNNAMAEAFKAA 554 + ++ K A Sbjct: 454 ---PARDNGLGSLGLELKKA 470 >UniRef50_C7NE91 RNA binding S1 domain protein n=3 Tax=Leptotrichia RepID=C7NE91_LEPBD Length = 600 Score = 376 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 165/548 (30%), Positives = 280/548 (51%), Gaps = 27/548 (4%) Query: 4 SFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQ 63 F L E+ L E E + G +V GV+ + D +D K E I A + ++ + Sbjct: 5 EFEVLLEDYLPE-EKKSGDVVEGVITRKELDYGFLDLNAKKEGRIYAHEVQD------FE 57 Query: 64 VGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVE 123 +GD+++V + +D ++S+ + + ++ + VTG I+ K+KGG+TV+ Sbjct: 58 IGDKIEVKVLREDDD--NIIVSKFMLDKAKELA----SFNVDDIVTGEISRKIKGGYTVK 111 Query: 124 LNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERD 183 + AFLP SL +D G++ +F + + + ++N+ +SR +I E + Sbjct: 112 IGKNEAFLPFSLARFEKDKD---YTGQKFKFLIRE--KNKSNITISRSDLI----KLEEE 162 Query: 184 QLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITV 243 + E++ G V G VK + D+G +DLG G +HI++++W++V + +E GDEI+ Sbjct: 163 KYFESVNIGDIVTGKVKEVFDFGIILDLGAASGFIHISEVSWEQVDNLTEKYKKGDEISA 222 Query: 244 KVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGL 303 K+++ D E+ R+ L +KQL EDPW+ A+ + G + V ++ D+G V +G G Sbjct: 223 KIIEKDAEKNRLKLSIKQLSEDPWINFAENHNVGDVVEAVVKDVLDFG-IVATVDGNSGF 281 Query: 304 VHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNK 363 VH+SE+ W N K GD ++ I+ E++ + L +KQ NPW E ++ Sbjct: 282 VHISELAWHN-GAKELKNYKEGDKFSAKIIQIENEKKNVKLSVKQLSENPWNTVKEKYHI 340 Query: 364 GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVD 423 GD +E I + DFG+ I L+ IDGL+H+SD+S+ +YK GD I ++ + Sbjct: 341 GDIIEKPITEVFDFGLLISLEKDIDGLLHVSDLSYKRES-NLTSKYKAGDLIKFKIVDFN 399 Query: 424 AERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEA 483 E+ RI+L K L +D + TGKV V G VEL G+E ++ +E Sbjct: 400 DEKNRITLSAKALLDDRWEVLEETYDFDNTFTGKVMNVQDYGIFVELEKGIEVFIHRNEF 459 Query: 484 SRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFS 543 S D+ E VGDEVE K VD+ ++ +S S++ +++ K+A K N Sbjct: 460 SWDKREH--KKYKVGDEVEFKVIIVDKLDKKLSGSIKQLEKSPWKEATEQCKKGNVINTE 517 Query: 544 NNAMAEAF 551 + E F Sbjct: 518 IVEIQENF 525 Score = 314 bits (805), Expect = 5e-84, Method: Composition-based stats. Identities = 127/514 (24%), Positives = 254/514 (49%), Gaps = 16/514 (3%) Query: 8 LFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDE 67 + +++ + IV G + K V G K+E+ +P + + + G + Sbjct: 80 MLDKAKELASFNVDDIVTGEISRKIKGGYTVKIG-KNEAFLPFSLARFEKDKDYT--GQK 136 Query: 68 VDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGI 127 + E +SR + E ++ + VTG + G ++L Sbjct: 137 FKFLIR--EKNKSNITISRSDLIKLEE-EKYFESVNIGDIVTGKVKEVFDFGIILDLGAA 193 Query: 128 RAFLPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQL 185 F+ S V V + +G E+ K+I+ D ++N + +S + + E Sbjct: 194 SGFIHISEVSWEQVDNLTEKYKKGDEISAKIIEKDAEKNRLKLSIKQLSED----PWINF 249 Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKV 245 EN G V+ +VK++ D+G + G G +HI+++AW + GD+ + K+ Sbjct: 250 AENHNVGDVVEAVVKDVLDFGIVATVDGNSGFVHISELAWHNGAKELKNYKEGDKFSAKI 309 Query: 246 LKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVH 305 ++ + E+ V L +KQL E+PW + ++Y G + +T + D+G + +E+ ++GL+H Sbjct: 310 IQIENEKKNVKLSVKQLSENPWNTVKEKYHIGDIIEKPITEVFDFGLLISLEKDIDGLLH 369 Query: 306 VSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGD 365 VS++ + ++ SK GD+++ ++D ++E+ RI+L K + W+ ET++ + Sbjct: 370 VSDLSYKRESNLTSK-YKAGDLIKFKIVDFNDEKNRITLSAKALLDDRWEVLEETYDFDN 428 Query: 366 RVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAE 425 GK+ ++ D+GIF+ L+ GI+ +H ++ SW+ + ++YK GDE+ V+ VD Sbjct: 429 TFTGKVMNVQDYGIFVELEKGIEVFIHRNEFSWD---KREHKKYKVGDEVEFKVIIVDKL 485 Query: 426 RERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASR 485 +++S +KQL + P+ KKG ++ ++ + V+L D G + E S Sbjct: 486 DKKLSGSIKQLEKSPWKEATEQCKKGNVINTEIVEIQENFVLVKLTDRFNGIVPKRELSE 545 Query: 486 DRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSV 519 + ++D + S+GD+V+A T ++ K ++I+LSV Sbjct: 546 EFLKDISEKFSIGDKVQAVITDINEKRKSIALSV 579 >UniRef50_B1LBI3 RNA binding S1 domain protein n=5 Tax=Thermotogaceae RepID=B1LBI3_THESQ Length = 543 Score = 375 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 155/558 (27%), Positives = 280/558 (50%), Gaps = 30/558 (5%) Query: 4 SFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQ 63 F + E R G IV+GVV+ + D V+VD G KSE +P + + E + Sbjct: 5 EFNDEILSQYEPEEFRRGQIVKGVVIGKEDDGVVVDFGGKSEGFVPVNELIKSLDE--YK 62 Query: 64 VGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVE 123 VG+ + + + + ++LS + + L K YE+ + V + + KGG+ V Sbjct: 63 VGENLTLQILNLNYEE-RSILSERRPVLRKTLEELRKDYEEKKPVKARVVSQTKGGYNVL 121 Query: 124 LNGI-RAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRN--NVVVSRRAVIESENSA 180 L G+ AFLPGS +R KE+E ++++ Q + +VVSRRA+ Sbjct: 122 LKGVVSAFLPGSHSLLRRNDPIPE---KEIEVIILEMVQTKRGPRIVVSRRAL----QDK 174 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGD 239 + ++ + G V+G VK +++ G V++ GV G + +++++ P +IV G Sbjct: 175 KIEEFFSEKKVGDIVEGTVKGISNAGVEVEISEGVRGFIPRSELSYDTRISPEDIVKPGQ 234 Query: 240 EITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEG 299 IT K+++ D+E+ V L LK+L DPW + ++YP G + G V ++ +G FV +E G Sbjct: 235 NITAKIIELDKEKKNVILSLKRLMPDPWEKVEEKYPVGKVVNGEVISIHPFGFFVRLEPG 294 Query: 300 VEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAE 359 VEGLV SE+ W N +VV+ GD+V+V V+++D+E R+++L K+ K +PW+ + Sbjct: 295 VEGLVPRSEVFWGNTRKSLEEVVSAGDLVKVEVINVDKENRKLTLSYKKAKGDPWENIED 354 Query: 360 THNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVV 419 +N + V GK+ I G F+ L+ G++G V +S+ISW +E K G+++ + Sbjct: 355 RYNVNNVVTGKVTGIIKQGAFVELEEGVEGFVPVSEISWKRI-DEPGEILKIGEKVKVKI 413 Query: 420 LQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELAD-GVEGYL 478 L++D E +I+L +K+ E+P+ + + +IV+G + + G VE+ + +EG++ Sbjct: 414 LKIDKENRKITLSIKRTQENPWERALKELETDSIVSGTIKKIVNSGVVVEVEEYDLEGFV 473 Query: 479 RASEASRDRVEDATLVLSVGDEVEAKFTGVDRKN---RAISLSVRAKDEADEKDAIATVN 535 + + G + +D + LS + +E + I Sbjct: 474 PNNHLLSEP--------ETGKVLNLVVLRIDPDEVLGGRMILSEKRYEE---RKNIEEYK 522 Query: 536 KQEDANFSNNAMAEAFKA 553 K + S ++ + K Sbjct: 523 KMVEKESSQKSIGDLLKK 540 >UniRef50_Q2RIU7 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RIU7_MOOTA Length = 736 Score = 373 bits (959), Expect = e-102, Method: Composition-based stats. Identities = 148/366 (40%), Positives = 221/366 (60%), Gaps = 12/366 (3%) Query: 14 KEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ---GELEIQVGDEVDV 70 + E R G++V G VV I + V+VD G KSE IP + + + VGD ++V Sbjct: 358 RMPELRRGNVVAGTVVQITDNEVMVDVGGKSEGVIPLNELSHRNVTDPHEVVAVGDTINV 417 Query: 71 ALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAF 130 + E+ G +LS+ +A R AW LE+ E + G + VKGG V++ G+R F Sbjct: 418 MVLRPENEEGHPVLSKRRADRRVAWEKLEEHLASGEEIQGEVIEVVKGGLLVDV-GVRGF 476 Query: 131 LPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQ 190 LP SLV+ V D G+ L +VI+LD+ +N VV+SR+A++E E +R +L+ Sbjct: 477 LPASLVERGYVEDLNAYLGQTLRLRVIELDRSKNKVVLSRKAILEEEYEKQRQATWNSLE 536 Query: 191 EGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDR 250 G KGIV+ LT++GAFVDLGGVDGLLH+++++W RV+HP + ++ G EI VK+L DR Sbjct: 537 VGQVRKGIVRRLTNFGAFVDLGGVDGLLHVSEISWGRVEHPRDALSEGQEIEVKILGIDR 596 Query: 251 ERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMD 310 E +VSLG KQL +PW A+RYP GT + G++ L +G FVE+E G+EGLVH+S++ Sbjct: 597 EEGKVSLGRKQLLPNPWDTAAERYPVGTIVEGKILRLAPFGAFVEVEPGIEGLVHISQLA 656 Query: 311 WTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC-------KANPWQQFAETHNK 363 P VV++GD++ V VL +D++ +R+SL L+Q +A P ++ AE N+ Sbjct: 657 -DRHVDKPEDVVSIGDIIPVKVLGVDQQAQRMSLSLRQAIREKNRKQAKPAEKPAENQNE 715 Query: 364 GDRVEG 369 G Sbjct: 716 SGVKLG 721 Score = 289 bits (739), Expect = 2e-76, Method: Composition-based stats. Identities = 105/384 (27%), Positives = 185/384 (48%), Gaps = 14/384 (3%) Query: 175 ESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSE 233 + + + L+ G V G V +TD VD+GG +G++ + +++ + V P E Sbjct: 348 QRNEMQQITARMPELRRGNVVAGTVVQITDNEVMVDVGGKSEGVIPLNELSHRNVTDPHE 407 Query: 234 IVNVGDEITVKVLKFDRERTRVSLGLKQLGED-PWVAIAKRYPEGTKLTGRVTNLTDYGC 292 +V VGD I V VL+ + E L ++ W + + G ++ G V + G Sbjct: 408 VVAVGDTINVMVLRPENEEGHPVLSKRRADRRVAWEKLEEHLASGEEIQGEVIEVVKGGL 467 Query: 293 FVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN 352 V++ GV G + S + + + G + + V+++D + ++ L K Sbjct: 468 LVDV--GVRGFLPAS-LVERGYVEDLNAYL--GQTLRLRVIELDRSKNKVVLSRKAILEE 522 Query: 353 PWQQF----AETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVRE 408 +++ + G +G ++ +T+FG F+ L GG+DGL+H+S+ISW E Sbjct: 523 EYEKQRQATWNSLEVGQVRKGIVRRLTNFGAFVDL-GGVDGLLHVSEISWGRV-EHPRDA 580 Query: 409 YKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATV 468 +G EI +L +D E ++SLG KQL +P++ G IV GK+ + GA V Sbjct: 581 LSEGQEIEVKILGIDREEGKVSLGRKQLLPNPWDTAAERYPVGTIVEGKILRLAPFGAFV 640 Query: 469 ELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR-AKDEADE 527 E+ G+EG + S+ + V+ V+S+GD + K GVD++ + +SLS+R A E + Sbjct: 641 EVEPGIEGLVHISQLADRHVDKPEDVVSIGDIIPVKVLGVDQQAQRMSLSLRQAIREKNR 700 Query: 528 KDAIATVNKQEDANFSNNAMAEAF 551 K A E+ N S + + F Sbjct: 701 KQAKPAEKPAENQNESGVKLGDLF 724 >UniRef50_A7HME7 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HME7_FERNB Length = 854 Score = 373 bits (958), Expect = e-102, Method: Composition-based stats. Identities = 154/554 (27%), Positives = 294/554 (53%), Gaps = 32/554 (5%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL 60 + ESF QL +E + G IV G+V I + +D G K +P E+ + Sbjct: 303 LEESFEQLLKEHENMNQVGRGKIVEGIVTEITPTGLTIDLGGKVTGVVPLEEL--FKELN 360 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 E +VG+++ V ++ + + G +LS +K + ++KA E+ + V+G I ++KGG+ Sbjct: 361 EYKVGEQIKVRVEKINEEDGTAILSAKKPMEKIIFDEIQKAKENGKPVSGKIIERIKGGY 420 Query: 121 TVELNGI-RAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQK--RNNVVVSRRAVIESE 177 V L + AFLPGS ++R + ++++F VI + + + N+VVSR+ + + Sbjct: 421 RVILENVVEAFLPGSESNIREDEEIPR---EKMQFAVISYETRGRKTNIVVSRKKLFQ-- 475 Query: 178 NSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVD-GLLHITDMAWKRVKHPSEIVN 236 D+ N + G V+GIV++++D GAFV + G+ G + +++++ + + Sbjct: 476 --KLIDEFFSNRKPGDVVEGIVESISDNGAFVKIAGITTGFIPNSEISYNTSIKAKDALT 533 Query: 237 VGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI 296 VG + + + + ER R+ L LK L DPW +AK+Y G +TG VT++ +G FV+I Sbjct: 534 VGKIMKFLIKEINPERKRILLSLKALLPDPWENVAKKYQIGQTVTGVVTSVKPFGFFVKI 593 Query: 297 EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQ 356 E+GVEG V + E+ W K + ++VV++ D V+V +L+I+ E+R++ L K +PW++ Sbjct: 594 EDGVEGFVPIEEVFWGRKG-NINEVVSINDFVKVQILEINPEKRQMKLSYKSVIGDPWEK 652 Query: 357 FAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIA 416 A+ ++GD EGK+ + G+ I ++ + ++S++SWN + K+G+ + Sbjct: 653 IAKKLSEGDISEGKVAKVLPNGVIIEIEPEVTAFCNISEVSWNFV-DNIEDVIKEGESVK 711 Query: 417 AVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEG 476 VL++D E ++I + +++ +P+ + +K+G I+ KV KG + L + +E Sbjct: 712 FQVLKIDPENKKIRVSIRKAKPNPWKAFANAHKEGDIIKVKVIKAVEKG-YIGLCEEIEV 770 Query: 477 YLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKN--RAISLSVRAKDEADEKDAIATV 534 Y+ S+ + L++GDE++ K ++ + I +S +A + + Sbjct: 771 YIPKSQVYEN--------LNLGDEIDGKIIKLEEQKDIYKIIVSPKAYENS------LAT 816 Query: 535 NKQEDANFSNNAMA 548 NK E +F + Sbjct: 817 NKNESKDFEGVTLE 830 Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 100/460 (21%), Positives = 202/460 (43%), Gaps = 19/460 (4%) Query: 87 EKAKRHEAWITLEKAYED------AETVTGVINGKVKGGFTVELNG-IRAFLPGSLVDVR 139 ++ E++ L K +E+ + V G++ G T++L G + +P + Sbjct: 299 KQEVLEESFEQLLKEHENMNQVGRGKIVEGIVTEITPTGLTIDLGGKVTGVVPLEEL--- 355 Query: 140 PVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIV 199 + G++++ +V K++++ ++S + +E E + EN G V G + Sbjct: 356 FKELNEYKVGEQIKVRVEKINEEDGTAILSAKKPMEKIIFDEIQKAKEN---GKPVSGKI 412 Query: 200 KNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLG 258 G V L V + L ++ ++ EI + V + +T + + Sbjct: 413 IERIKGGYRVILENVVEAFLPGSE---SNIREDEEIPREKMQFAVISYETRGRKTNIVVS 469 Query: 259 LKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHP 318 K+L + G + G V +++D G FV+I G + SE+ + N +I Sbjct: 470 RKKLFQKLIDEFFSNRKPGDVVEGIVESISDNGAFVKIAGITTGFIPNSEISY-NTSIKA 528 Query: 319 SKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFG 378 + VG +++ ++ +I+ ER+RI L LK +PW+ A+ + G V G + S+ FG Sbjct: 529 KDALTVGKIMKFLIKEINPERKRILLSLKALLPDPWENVAKKYQIGQTVTGVVTSVKPFG 588 Query: 379 IFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAE 438 F+ ++ G++G V + ++ W G D + +L+++ E+ ++ L K + Sbjct: 589 FFVKIEDGVEGFVPIEEVFWGRKG-NINEVVSINDFVKVQILEINPEKRQMKLSYKSVIG 647 Query: 439 DPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVG 498 DP+ +G I GKV V G +E+ V + SE S + V++ V+ G Sbjct: 648 DPWEKIAKKLSEGDISEGKVAKVLPNGVIIEIEPEVTAFCNISEVSWNFVDNIEDVIKEG 707 Query: 499 DEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQE 538 + V+ + +D +N+ I +S+R K + + Sbjct: 708 ESVKFQVLKIDPENKKIRVSIRKAKPNPWKAFANAHKEGD 747 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 109/478 (22%), Positives = 208/478 (43%), Gaps = 27/478 (5%) Query: 70 VALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRA 129 V + ++ L +A + +E E E + K K T+++ Sbjct: 208 VVVVGGKNSSNTKKLFEIAYNYGKA-VHIESINEINEIEEMLFREKSKDIQTIKI----G 262 Query: 130 FLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIES--ENSAERDQLLE 187 + G+ + V L K + + ++ N ++ V+E E + + + Sbjct: 263 LISGTSTYSKDVEHILKYLVKNYGGRELYMEDLNN----LKQEVLEESFEQLLKEHENMN 318 Query: 188 NLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVL 246 + G V+GIV +T G +DLGG V G++ + ++ K +E VG++I V+V Sbjct: 319 QVGRGKIVEGIVTEITPTGLTIDLGGKVTGVVPLEEL----FKELNE-YKVGEQIKVRVE 373 Query: 247 KFDRERTRVSLGLKQ-LGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVH 305 K + E L K+ + + + I K G ++G++ G V +E VE + Sbjct: 374 KINEEDGTAILSAKKPMEKIIFDEIQKAKENGKPVSGKIIERIKGGYRVILENVVEAFLP 433 Query: 306 VSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRR--ISLGLKQCKANPWQQFAETHNK 363 SE + P + ++ V+ + R+ I + K+ +F Sbjct: 434 GSESNIREDEEIPRE------KMQFAVISYETRGRKTNIVVSRKKLFQKLIDEFFSNRKP 487 Query: 364 GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVD 423 GD VEG ++SI+D G F+ + G G + S+IS+N + + A G + ++ +++ Sbjct: 488 GDVVEGIVESISDNGAFVKIAGITTGFIPNSEISYNTSIK-AKDALTVGKIMKFLIKEIN 546 Query: 424 AERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEA 483 ER+RI L +K L DP+ N + G VTG VT+V G V++ DGVEG++ E Sbjct: 547 PERKRILLSLKALLPDPWENVAKKYQIGQTVTGVVTSVKPFGFFVKIEDGVEGFVPIEEV 606 Query: 484 SRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDAN 541 R + V+S+ D V+ + ++ + R + LS ++ + +++ + + Sbjct: 607 FWGRKGNINEVVSINDFVKVQILEINPEKRQMKLSYKSVIGDPWEKIAKKLSEGDISE 664 Score = 178 bits (452), Expect = 5e-43, Method: Composition-based stats. Identities = 76/378 (20%), Positives = 175/378 (46%), Gaps = 27/378 (7%) Query: 5 FAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK---NAQGELE 61 F +L +E +PG +V G+V +I + V + IP + + + + Sbjct: 474 FQKLIDEFFS--NRKPGDVVEGIVESISDNGAFVKIAGITTGFIPNSEISYNTSIKAKDA 531 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 + VG + + + LLS KA + W + K Y+ +TVTGV+ GF Sbjct: 532 LTVGKIMKFLIKEINPERKRILLSL-KALLPDPWENVAKKYQIGQTVTGVVTSVKPFGFF 590 Query: 122 VELN-GIRAFLPGSLVDVRPVRDTLHLE--GKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 V++ G+ F+P V + + ++ ++++++ ++ + +S ++VI Sbjct: 591 VKIEDGVEGFVPIEEVFWGRKGNINEVVSINDFVKVQILEINPEKRQMKLSYKSVI---- 646 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNV 237 +++ + L EG +G V + G +++ V +I++++W V + +++ Sbjct: 647 GDPWEKIAKKLSEGDISEGKVAKVLPNGVIIEIEPEVTAFCNISEVSWNFVDNIEDVIKE 706 Query: 238 GDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE 297 G+ + +VLK D E ++ + +++ +PW A A + EG + +V + G ++ + Sbjct: 707 GESVKFQVLKIDPENKKIRVSIRKAKPNPWKAFANAHKEGDIIKVKVIKAVEKG-YIGLC 765 Query: 298 EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERR--RISLGLKQCKANPWQ 355 E +E + S++ + +N+GD ++ ++ ++E++ +I + K + + Sbjct: 766 EEIEVYIPKSQV---------YENLNLGDEIDGKIIKLEEQKDIYKIIVSPKAYENSLAT 816 Query: 356 QFAETHN-KGDRVEGKIK 372 E+ + +G +EGKI Sbjct: 817 NKNESKDFEGVTLEGKIS 834 >UniRef50_B8J034 RNA binding S1 domain protein n=2 Tax=Desulfovibrio RepID=B8J034_DESDA Length = 489 Score = 373 bits (958), Expect = e-102, Method: Composition-based stats. Identities = 151/434 (34%), Positives = 233/434 (53%), Gaps = 10/434 (2%) Query: 3 ESFAQLFEESLKE-IETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE 61 E FA + + G V G V+AI D V VD G+K + + + +A G+ Sbjct: 16 EDFAAMLAAHETSGHRLQAGQKVTGTVIAITGDSVFVDVGIKVDGIMERKDILDADGKET 75 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 G+ V+ + V LSR + LE+A + A V G I G KGG+T Sbjct: 76 TAPGEPVEAWVIGVSAQE--IRLSRSMSG--SGVAALEEARDAALPVDGRIAGSCKGGYT 131 Query: 122 VELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 VE+ G AF PGS + + D L G+ L+F VI+++ + N+VVSRRA+++ E + Sbjct: 132 VEVLGKTAFCPGSQIGLASAEDAETLTGRTLQFLVIRVENRGRNIVVSRRALLDRERQEQ 191 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDE 240 + LLE L G V+G + +GAF++L V+G++H+++++W RV P E V++GD Sbjct: 192 LEALLEKLGVGDTVEGKISRFAPFGAFMELDTAVEGMIHLSELSWSRVGAPDEAVSLGDT 251 Query: 241 ITVKVLKF---DRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE 297 + KVL D+ + R++L KQ DPW + +R G + G+V L +G FVEI Sbjct: 252 VRAKVLSISKSDKGQVRIALSRKQAEGDPWQDVTQRLENGAVVQGKVVRLAPFGAFVEIL 311 Query: 298 EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQF 357 G+EGLVH+SE+ WT + P +++ VGD+V V + +I+ + RRISL L+ + +PWQ Sbjct: 312 PGIEGLVHISELSWTKRVNKPEEILQVGDIVAVKIKEINADSRRISLSLRDAEGDPWQDA 371 Query: 358 AETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAA 417 A+ G V+G ++ + +G+FI L GI GL+ I N + KGD + Sbjct: 372 AQQFAPGSIVQGIVEGRSTYGLFITLAPGITGLLPAGIIK-NAKNAGQYSKLDKGDSVTL 430 Query: 418 VVLQVDAERERISL 431 VV +D RISL Sbjct: 431 VVQNLDTAARRISL 444 Score = 257 bits (656), Expect = 9e-67, Method: Composition-based stats. Identities = 111/478 (23%), Positives = 200/478 (41%), Gaps = 23/478 (4%) Query: 89 AKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRPVRDTLHL 147 A A T + + VTG + V++ + + + ++T Sbjct: 19 AAMLAAHETSGHRLQAGQKVTGTVIAITGDSVFVDVGIKVDGIMERKDILDADGKETTA- 77 Query: 148 EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGA 207 G+ +E VI + + + S + RD L V G + G Sbjct: 78 PGEPVEAWVIGVSAQEIRLSRSMSGSGVAALEEARDAALP-------VDGRIAGSCKGGY 130 Query: 208 FVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGE--- 264 V++ G + + + + G + V++ + + + + L + Sbjct: 131 TVEVLGKTAFCPGSQIGLASAEDAETL--TGRTLQFLVIRVENRGRNIVVSRRALLDRER 188 Query: 265 -DPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVN 323 + A+ ++ G + G+++ +G F+E++ VEG++H+SE+ W+ P + V+ Sbjct: 189 QEQLEALLEKLGVGDTVEGKISRFAPFGAFMELDTAVEGMIHLSELSWSRVGA-PDEAVS 247 Query: 324 VGDVVEVMVLDI---DEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIF 380 +GD V VL I D+ + RI+L KQ + +PWQ + G V+GK+ + FG F Sbjct: 248 LGDTVRAKVLSISKSDKGQVRIALSRKQAEGDPWQDVTQRLENGAVVQGKVVRLAPFGAF 307 Query: 381 IGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDP 440 + + GI+GLVH+S++SW + + GD +A + +++A+ RISL ++ DP Sbjct: 308 VEILPGIEGLVHISELSWTKRVNKPEEILQVGDIVAVKIKEINADSRRISLSLRDAEGDP 367 Query: 441 FNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDE 500 + + G+IV G V G + LA G+ G L A + L GD Sbjct: 368 WQDAAQQFAPGSIVQGIVEGRSTYGLFITLAPGITGLLPAGIIKNAKNAGQYSKLDKGDS 427 Query: 501 VEAKFTGVDRKNRAISLSVRAKDE---ADEKDAIATVNKQE-DANFSNNAMAEAFKAA 554 V +D R ISL+ + AD+K +K AN N +A+A A Sbjct: 428 VTLVVQNLDTAARRISLAPEGSEASFSADDKAWKQHASKGSGSANTGMNTLAQALHKA 485 >UniRef50_B0VFT2 Putative Ribosomal protein S1 n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VFT2_9BACT Length = 503 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 141/432 (32%), Positives = 237/432 (54%), Gaps = 12/432 (2%) Query: 1 MTESFAQLFEESLKE-IETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE 59 M E + ++ EES + E + G ++ +V+I + ++++ G K ++ +F +++G Sbjct: 17 MKEEYLRMLEESFQNTAEIKKGDVIEAPIVSIGEQYIILNLGGKFDAYAEIGEFSDSRGV 76 Query: 60 LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGG 119 L +VGD + + V+ +++R K++ ++ +A+E V G I KGG Sbjct: 77 LPYKVGDNLKGYV--VDQNENGYVVARSLTKQYVDKQSILEAFEKKIPVQGKIYTPTKGG 134 Query: 120 FTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 F V++ G RAF P S V + PV D+ GK L+F VI+ + +VVS R + E Sbjct: 135 FNVDILGARAFCPVSQVSLHPVEDSSQFIGKTLDFLVIECSENCRRIVVSHRQLEEMREQ 194 Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGD 239 ++ L L+ G VKG V +T +GAF+DLGG++GL+H+++++W+ + P + + G Sbjct: 195 ERKETALAKLKVGDIVKGKVLRMTTFGAFIDLGGIEGLMHVSEISWQHIVRPQDELKKGQ 254 Query: 240 EITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEG 299 EI VK+L D + +++L K L EDP+ K EG + RV L ++G F E++ G Sbjct: 255 EIEVKIL--DIKGEKIALSRKVLLEDPFEVAMKELHEGDIINCRVLRLHNFGAFAELKPG 312 Query: 300 VEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAE 359 VEGL+ +SEM HP +V GD V+V +L IDE+ +ISL LK +A+PW + E Sbjct: 313 VEGLIPISEMSRNRNISHPRDIVKEGDWVQVQILRIDEDTHKISLSLKALEADPWDKIDE 372 Query: 360 THNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVV 419 EG ++S T+FG+F+ + GI GL+ S + N ++ G+ + +V Sbjct: 373 IIQLETPFEGIVESSTNFGVFVTISEGITGLLPKSRVRKN-------DTFQTGEPVTLMV 425 Query: 420 LQVDAERERISL 431 +D E RI+L Sbjct: 426 TAIDKENHRITL 437 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 100/421 (23%), Positives = 194/421 (46%), Gaps = 25/421 (5%) Query: 103 EDAETVTGVINGKVKGGFTVELNG-IRAFLP-GSLVDVRPVRDTLHLEGKELEFKVIKLD 160 + + + I + + L G A+ G D R V + G L+ V +D Sbjct: 36 KKGDVIEAPIVSIGEQYIILNLGGKFDAYAEIGEFSDSRGV--LPYKVGDNLKGYV--VD 91 Query: 161 QKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHI 220 Q N VV+R ++ ++ +LE ++ + V+G + T G VD+ G + Sbjct: 92 QNENGYVVARSL---TKQYVDKQSILEAFEKKIPVQGKIYTPTKGGFNVDILGARAFCPV 148 Query: 221 TDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGE----DPWVAIAKRYPE 276 + ++ V+ S+ +G + V++ R+ + +QL E + + Sbjct: 149 SQVSLHPVEDSSQF--IGKTLDFLVIECSENCRRIVVSHRQLEEMREQERKETALAKLKV 206 Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDID 336 G + G+V +T +G F+++ G+EGL+HVSE+ W + + P + G +EV +LDI Sbjct: 207 GDIVKGKVLRMTTFGAFIDLG-GIEGLMHVSEISWQH-IVRPQDELKKGQEIEVKILDIK 264 Query: 337 EERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDI 396 E +I+L K +P++ + ++GD + ++ + +FG F L G++GL+ +S++ Sbjct: 265 GE--KIALSRKVLLEDPFEVAMKELHEGDIINCRVLRLHNFGAFAELKPGVEGLIPISEM 322 Query: 397 SWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTG 456 S N K+GD + +L++D + +ISL +K L DP++ + + G Sbjct: 323 SRNRNISHPRDIVKEGDWVQVQILRIDEDTHKISLSLKALEADPWDKIDEIIQLETPFEG 382 Query: 457 KVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAIS 516 V + G V +++G+ G L S ++ G+ V T +D++N I+ Sbjct: 383 IVESSTNFGVFVTISEGITGLLPKSRVRKN------DTFQTGEPVTLMVTAIDKENHRIT 436 Query: 517 L 517 L Sbjct: 437 L 437 >UniRef50_B7IE33 4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Thermosipho africanus TCF52B RepID=B7IE33_THEAB Length = 811 Score = 370 bits (950), Expect = e-101, Method: Composition-based stats. Identities = 151/544 (27%), Positives = 286/544 (52%), Gaps = 28/544 (5%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL 60 M +F +L + L + R G IV VV+ + + VD G KSE + +++ + Sbjct: 270 MENNFEKLLDSYLFD-NVRKGEIVEAVVLRKGESEIFVDFGWKSEGVVTSDEL--VKDVK 326 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 + ++G+++ + L D G LS + + L++ +E E + G +N ++KGG+ Sbjct: 327 DYKIGEKLSLILLRKNDDEGIAYLSEKIVYSKKLKEILKEKFEKGEKIIGKVNSEIKGGY 386 Query: 121 TVELNG-IRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQ--KRNNVVVSRRAVIESE 177 V + I+AFLP S + ++ LEFK+IK ++ KR N+++SR+A I Sbjct: 387 KVLIENTIQAFLPKSESMIFDG----NIPKSPLEFKIIKFEERGKRLNIILSRKAFI--- 439 Query: 178 NSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVN 236 + ++++ +EG ++GIVK + +GAFV + G+DGLL +++++ ++++ Sbjct: 440 -NEQKEKFFNERKEGDIIEGIVKKIEKFGAFVRIFEGIDGLLPNSEVSYDTSLKVEDVLS 498 Query: 237 VGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI 296 G + + + K D+E ++ L LK+L DPW + K+Y G ++G+V N+ YG +V + Sbjct: 499 EGQSVKLYIKKIDKENRKILLSLKELMPDPWQNVTKKYKVGDIVSGKVKNILSYGFYVNL 558 Query: 297 EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQ 356 E GV+GLVH+ ++ W + S +V+VGD+V+VM+ +ID +++ L K+ + +PW+ Sbjct: 559 EPGVDGLVHIDDIFWGRRG-KISDIVSVGDIVKVMIKEIDPNNKKMRLSYKEVEGDPWEN 617 Query: 357 FAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIA 416 E + G+ + G + I D G+ + ++ GI G +S+ISWN +G ++ Sbjct: 618 IEEKYPVGNTITGTVSFILDKGVIVEIERGISGFCPISEISWNYIS-SVKDVLNEGQKVK 676 Query: 417 AVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEG 476 AV+ ++D E ++ L +K++ E+P+ + +K G IV KV G V + VE Sbjct: 677 AVITELDKENRKMRLSIKRVQENPWKKFKDNHKIGDIVAVKVIKELKSG-YVGACENVEI 735 Query: 477 YLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNR--AISLSVRAKDEADEKDAIATV 534 YL S ++ +++GDE++ K + I+ S + + D++ Sbjct: 736 YLPKSHVLKE--------ITLGDELKVKIIQIKEDGEILRITASEKELENEKVIDSLKEE 787 Query: 535 NKQE 538 + E Sbjct: 788 FENE 791 Score = 168 bits (426), Expect = 5e-40, Method: Composition-based stats. Identities = 67/369 (18%), Positives = 150/369 (40%), Gaps = 24/369 (6%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK---NAQGELEIQVGDEVDVALD 73 E + G I+ G+V I+K V + +P + + + E + G V + + Sbjct: 449 ERKEGDIIEGIVKKIEKFGAFVRIFEGIDGLLPNSEVSYDTSLKVEDVLSEGQSVKLYIK 508 Query: 74 AVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFLP 132 ++ + LLS ++ + W + K Y+ + V+G + + GF V L G+ + Sbjct: 509 KIDKENRKILLSLKEL-MPDPWQNVTKKYKVGDIVSGKVKNILSYGFYVNLEPGVDGLVH 567 Query: 133 GSLVDVRPVRDTLHLE--GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQ 190 + + G ++ + ++D + +S + V + + E Sbjct: 568 IDDIFWGRRGKISDIVSVGDIVKVMIKEIDPNNKKMRLSYKEV----EGDPWENIEEKYP 623 Query: 191 EGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFD 249 G + G V + D G V++ G+ G I++++W + +++N G ++ + + D Sbjct: 624 VGNTITGTVSFILDKGVIVEIERGISGFCPISEISWNYISSVKDVLNEGQKVKAVITELD 683 Query: 250 RERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEM 309 +E ++ L +K++ E+PW + G + +V E++ G G E+ Sbjct: 684 KENRKMRLSIKRVQENPWKKFKDNHKIGDIVAVKVIK--------ELKSGYVGACENVEI 735 Query: 310 DWTNKNIHPSKVVNVGDVVEVMVLDI--DEERRRISLGLKQCKANPWQQFAETHNKGDRV 367 H K + +GD ++V ++ I D E RI+ K+ + + + +R Sbjct: 736 --YLPKSHVLKEITLGDELKVKIIQIKEDGEILRITASEKELENEKVIDSLKEEFENERY 793 Query: 368 EGKIKSITD 376 + + + Sbjct: 794 TTIERKVDN 802 >UniRef50_A1HTW2 Hydroxymethylbutenyl pyrophosphate reductase n=4 Tax=Veillonellaceae RepID=A1HTW2_9FIRM Length = 655 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 152/380 (40%), Positives = 216/380 (56%), Gaps = 6/380 (1%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE 61 + F QL ++ +K +E PG I++G VV + KD V VD G K E IP + E Sbjct: 272 MQEFDQLLDQDMKPLE--PGVILKGRVVGVRKDEVFVDIGHKGEGVIPLTELAYPVPENA 329 Query: 62 ---IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 + GDE+DV + A E G LS+ KA AW L+ A + ETVTG + VKG Sbjct: 330 SDVVSEGDEIDVYVLAPEGDDGPVKLSKVKADNIVAWEKLQAAAQANETVTGKVTAVVKG 389 Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 G V L G+R F+P S V V+ V D G+ LE I++DQ + +V+SRR V+E E Sbjct: 390 GLAVSLYGVRGFVPASQVAVQHVADLTPYVGQTLELLPIEIDQAKQKIVLSRRKVLEQEQ 449 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVG 238 ++L L EG V G V + D+G FVDLGGVDGL+HI+D++W RVK+P+E+VN+G Sbjct: 450 QRRAEELFSRLAEGQIVTGTVSRIADFGVFVDLGGVDGLIHISDLSWHRVKNPTEVVNIG 509 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE 298 DE+ V V K D + R+SL LK++ DPW + + EG + G+VT L +G FVE++ Sbjct: 510 DEVQVFVQKVDPKAKRISLSLKRVQRDPWYDVVEGLREGMTVAGKVTKLAKFGAFVEVKP 569 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFA 358 GVEGLVH+SE+ + +VV VG V V +L ID+E +RISL + Q + + + Sbjct: 570 GVEGLVHLSELA-DRRVASAQEVVEVGQTVTVKILGIDKENKRISLSIAQAQQDAERADY 628 Query: 359 ETHNKGDRVEGKIKSITDFG 378 + + + FG Sbjct: 629 QRFLSQESNTLGVTIGEKFG 648 Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats. Identities = 119/383 (31%), Positives = 196/383 (51%), Gaps = 15/383 (3%) Query: 176 SENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSEI 234 E DQ ++ L+ G+ +KG V + FVD+G +G++ +T++A+ ++ S++ Sbjct: 273 QEFDQLLDQDMKPLEPGVILKGRVVGVRKDEVFVDIGHKGEGVIPLTELAYPVPENASDV 332 Query: 235 VNVGDEITVKVLKFDRERTRVSLG-LKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCF 293 V+ GDEI V VL + + V L +K W + +TG+VT + G Sbjct: 333 VSEGDEIDVYVLAPEGDDGPVKLSKVKADNIVAWEKLQAAAQANETVTGKVTAVVKGGLA 392 Query: 294 VEIEEGVEGLVHVSEMDWTNKNIHPSKVVNV-GDVVEVMVLDIDEERRRISLGLKQCKAN 352 V + GV G V S++ H + + G +E++ ++ID+ +++I L ++ Sbjct: 393 VSLY-GVRGFVPASQVA----VQHVADLTPYVGQTLELLPIEIDQAKQKIVLSRRKVLEQ 447 Query: 353 PWQQFAE----THNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVRE 408 Q+ AE +G V G + I DFG+F+ L GG+DGL+H+SD+SW+ + Sbjct: 448 EQQRRAEELFSRLAEGQIVTGTVSRIADFGVFVDL-GGVDGLIHISDLSWHRV-KNPTEV 505 Query: 409 YKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATV 468 GDE+ V +VD + +RISL +K++ DP+ + V ++G V GKVT + GA V Sbjct: 506 VNIGDEVQVFVQKVDPKAKRISLSLKRVQRDPWYDVVEGLREGMTVAGKVTKLAKFGAFV 565 Query: 469 ELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEK 528 E+ GVEG + SE + RV A V+ VG V K G+D++N+ ISLS+ + E+ Sbjct: 566 EVKPGVEGLVHLSELADRRVASAQEVVEVGQTVTVKILGIDKENKRISLSIAQAQQDAER 625 Query: 529 DAIATVNKQEDANFSNNAMAEAF 551 QE N + E F Sbjct: 626 ADYQRFLSQES-NTLGVTIGEKF 647 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 92/360 (25%), Positives = 176/360 (48%), Gaps = 15/360 (4%) Query: 87 EKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGI-RAFLPGSLVDVRPVRDTL 145 + + + K E + G + G K V++ +P + + + Sbjct: 271 KMQEFDQLLDQDMKPLEPGVILKGRVVGVRKDEVFVDIGHKGEGVIPLTELAYPVPENAS 330 Query: 146 HLE--GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLT 203 + G E++ V+ + V +S+ ++++N ++L Q V G V + Sbjct: 331 DVVSEGDEIDVYVLAPEGDDGPVKLSK---VKADNIVAWEKLQAAAQANETVTGKVTAVV 387 Query: 204 DYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLG 263 G V L GV G + + +A + V + VG + + ++ D+ + ++ L +++ Sbjct: 388 KGGLAVSLYGVRGFVPASQVAVQHVADLTPY--VGQTLELLPIEIDQAKQKIVLSRRKVL 445 Query: 264 EDPW----VAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPS 319 E + R EG +TG V+ + D+G FV++ GV+GL+H+S++ W ++ +P+ Sbjct: 446 EQEQQRRAEELFSRLAEGQIVTGTVSRIADFGVFVDLG-GVDGLIHISDLSW-HRVKNPT 503 Query: 320 KVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGI 379 +VVN+GD V+V V +D + +RISL LK+ + +PW E +G V GK+ + FG Sbjct: 504 EVVNIGDEVQVFVQKVDPKAKRISLSLKRVQRDPWYDVVEGLREGMTVAGKVTKLAKFGA 563 Query: 380 FIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAED 439 F+ + G++GLVHLS+++ + A + G + +L +D E +RISL + Q +D Sbjct: 564 FVEVKPGVEGLVHLSELA-DRRVASAQEVVEVGQTVTVKILGIDKENKRISLSIAQAQQD 622 >UniRef50_D1AGH2 RNA binding S1 domain protein n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AGH2_SEBTE Length = 681 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 146/533 (27%), Positives = 270/533 (50%), Gaps = 26/533 (4%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE 61 F L E L E E + G ++ G+++ +KD +D K E I + +N Sbjct: 1 MNEFETLLNEYLPE-EKKKGELIEGIILRKEKDFSYLDVNDKLEGKIYTNEIEN------ 53 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 + VG+ V+V + + ++S+ + + + +YE + + G I K+KGG+ Sbjct: 54 LNVGEVVEVKIIRNDGE--NIIVSKFLLDKEKEFA----SYETGDIIQGEIIEKIKGGYK 107 Query: 122 VELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 V+L FLP S+ ++R + K +FK + +D+ N+ +SR ++ E Sbjct: 108 VKLGKNIGFLPFSISNLRRDDEY-----KNKKFKFLIIDKDTKNLTLSRSDLV----KKE 158 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEI 241 + + +Q+G ++G +K + D+G VDLG G +HI+++ W VK + N D+I Sbjct: 159 EEDFYQTVQKGDVLEGTIKEILDFGLIVDLGKTTGFIHISEVDWSSVKDLKHLFNANDKI 218 Query: 242 TVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVE 301 K+++ D+E ++ + +KQ+ EDPW +Y G L V+ + +G VE E Sbjct: 219 KAKIIELDKENKKIKMSIKQMKEDPWNIFIAKYKTGDVLEAEVSEVMPFGIVVEHEHN-R 277 Query: 302 GLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETH 361 G +H+SE+ W + SK ++G ++ +++IDE+ R L +KQ NPW + E + Sbjct: 278 GFIHISEISW-HPIEELSKCYSLGQKLKARIIEIDEKGRNYKLSVKQLDENPWDKLVENY 336 Query: 362 NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQ 421 GD VEG I+ I DF I +D + G +H+S+ISW A + ++K GD + A +++ Sbjct: 337 KVGDTVEGVIEKILDFAILPSVDD-VLGFIHISEISWG-AHTGVIEQFKLGDTVKAKIIE 394 Query: 422 VDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRAS 481 ++ + + L +K+L+ DP+ +KG I+ ++ + VE+ + VEG + S Sbjct: 395 LNKDAKIFKLSIKRLSSDPWETVKDKYQKGQILEREIKEILDFALLVEMEENVEGMVHIS 454 Query: 482 EASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATV 534 E S RV + +VG++++ K + + R +SLS++A + + Sbjct: 455 EISYRRVNNLKEKFTVGEKIKFKILEFNEEKRRVSLSMKAILDDIWANIHDKY 507 Score = 319 bits (817), Expect = 2e-85, Method: Composition-based stats. Identities = 127/516 (24%), Positives = 251/516 (48%), Gaps = 21/516 (4%) Query: 10 EESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQF---KNAQGELEIQVGD 66 EE + G ++ G + I ++VD G K+ I + + D Sbjct: 158 EEEDFYQTVQKGDVLEGTIKEILDFGLIVDLG-KTTGFIHISEVDWSSVKDLKHLFNAND 216 Query: 67 EVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNG 126 ++ + ++ + +S ++ + + W Y+ + + ++ + G VE Sbjct: 217 KIKAKIIELDKENKKIKMSIKQM-KEDPWNIFIAKYKTGDVLEAEVSEVMPFGIVVEHEH 275 Query: 127 IRAFLPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQ 184 R F+ S + P+ + G++L+ ++I++D+K N +S + + E+ D+ Sbjct: 276 NRGFIHISEISWHPIEELSKCYSLGQKLKARIIEIDEKGRNYKLSVKQLDEN----PWDK 331 Query: 185 LLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 L+EN + G V+G+++ + D+ + V G +HI++++W E +GD + K Sbjct: 332 LVENYKVGDTVEGVIEKILDFAILPSVDDVLGFIHISEISWGAHTGVIEQFKLGDTVKAK 391 Query: 245 VLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLV 304 +++ +++ L +K+L DPW + +Y +G L + + D+ VE+EE VEG+V Sbjct: 392 IIELNKDAKIFKLSIKRLSSDPWETVKDKYQKGQILEREIKEILDFALLVEMEENVEGMV 451 Query: 305 HVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKG 364 H+SE+ + N + + VG+ ++ +L+ +EE+RR+SL +K + W + + Sbjct: 452 HISEISYRRVN-NLKEKFTVGEKIKFKILEFNEEKRRVSLSMKAILDDIWANIHDKYTLN 510 Query: 365 DRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDA 424 V GK+ +I ++GIF L+ G++ +H +D SW +E +EYK GD + +L++D Sbjct: 511 QEVSGKVINIQEYGIFAELEDGLEVFIHRNDFSWE---KEEHKEYKLGDIVNFRILKIDE 567 Query: 425 ERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEAS 484 + ++IS G+KQL + P+ ++ K G V V G V+L D + E Sbjct: 568 KEKKISGGIKQLTQSPWKEMESMYKIGNKVKVSVENEIENGYIVKLTDRFSALIPKKELP 627 Query: 485 RDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 + L+VGD VE T + K +++ LSV+ Sbjct: 628 ENT------TLAVGDTVEGIITEMHEKRKSVILSVK 657 Score = 310 bits (795), Expect = 9e-83, Method: Composition-based stats. Identities = 112/530 (21%), Positives = 248/530 (46%), Gaps = 17/530 (3%) Query: 8 LFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDE 67 L ++ + G I++G ++ K V G K+ +P N + + E + + Sbjct: 78 LLDKEKEFASYETGDIIQGEIIEKIKGGYKVKLG-KNIGFLPFS-ISNLRRDDEYK-NKK 134 Query: 68 VDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGI 127 + ++ LSR + E + + + + G I + G V+L Sbjct: 135 FKFLI--IDKDTKNLTLSRSDLVKKEE-EDFYQTVQKGDVLEGTIKEILDFGLIVDLGKT 191 Query: 128 RAFLPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQL 185 F+ S VD V+D HL +++ K+I+LD++ + + I+ + Sbjct: 192 TGFIHISEVDWSSVKDLKHLFNANDKIKAKIIELDKENKKI----KMSIKQMKEDPWNIF 247 Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKV 245 + + G ++ V + +G V+ G +HI++++W ++ S+ ++G ++ ++ Sbjct: 248 IAKYKTGDVLEAEVSEVMPFGIVVEHEHNRGFIHISEISWHPIEELSKCYSLGQKLKARI 307 Query: 246 LKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVH 305 ++ D + L +KQL E+PW + + Y G + G + + D+ +++ V G +H Sbjct: 308 IEIDEKGRNYKLSVKQLDENPWDKLVENYKVGDTVEGVIEKILDFAILPSVDD-VLGFIH 366 Query: 306 VSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGD 365 +SE+ W + +GD V+ +++++++ + L +K+ ++PW+ + + KG Sbjct: 367 ISEISWGAHTGVIEQ-FKLGDTVKAKIIELNKDAKIFKLSIKRLSSDPWETVKDKYQKGQ 425 Query: 366 RVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAE 425 +E +IK I DF + + ++ ++G+VH+S+IS+ ++ G++I +L+ + E Sbjct: 426 ILEREIKEILDFALLVEMEENVEGMVHISEISYRRVN-NLKEKFTVGEKIKFKILEFNEE 484 Query: 426 RERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASR 485 + R+SL +K + +D + N V+GKV + G EL DG+E ++ ++ S Sbjct: 485 KRRVSLSMKAILDDIWANIHDKYTLNQEVSGKVINIQEYGIFAELEDGLEVFIHRNDFSW 544 Query: 486 DRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVN 535 ++ E +GD V + +D K + IS ++ ++ K+ + Sbjct: 545 EKEEH--KEYKLGDIVNFRILKIDEKEKKISGGIKQLTQSPWKEMESMYK 592 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 95/444 (21%), Positives = 192/444 (43%), Gaps = 29/444 (6%) Query: 96 ITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRPVRDTLHLEGKELEF 154 L + + E + G+I K K +++N + + + + G+ +E Sbjct: 10 EYLPEEKKKGELIEGIILRKEKDFSYLDVNDKLEG-----KIYTNEIENLN--VGEVVEV 62 Query: 155 KVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV 214 K+I+ D + V S+ ++++ + + G ++G + G V LG Sbjct: 63 KIIRNDGENIIV---------SKFLLDKEKEFASYETGDIIQGEIIEKIKGGYKVKLGKN 113 Query: 215 DGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRY 274 G L + ++ R + K L D++ ++L L + + Sbjct: 114 IGFLPFS-ISNLRRDDEYKNK------KFKFLIIDKDTKNLTLSRSDLVKKEEEDFYQTV 166 Query: 275 PEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLD 334 +G L G + + D+G V++ G +H+SE+DW++ + N D ++ +++ Sbjct: 167 QKGDVLEGTIKEILDFGLIVDLG-KTTGFIHISEVDWSS-VKDLKHLFNANDKIKAKIIE 224 Query: 335 IDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLS 394 +D+E ++I + +KQ K +PW F + GD +E ++ + FGI + + G +H+S Sbjct: 225 LDKENKKIKMSIKQMKEDPWNIFIAKYKTGDVLEAEVSEVMPFGIVVEHEHN-RGFIHIS 283 Query: 395 DISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIV 454 +ISW+ EE + Y G ++ A ++++D + L VKQL E+P++ V K G V Sbjct: 284 EISWH-PIEELSKCYSLGQKLKARIIEIDEKGRNYKLSVKQLDENPWDKLVENYKVGDTV 342 Query: 455 TGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRA 514 G + + + D V G++ SE S +GD V+AK +++ + Sbjct: 343 EGVIEKILDFAILPSV-DDVLGFIHISEISWGAHTGVIEQFKLGDTVKAKIIELNKDAKI 401 Query: 515 ISLSVRAKDEADEKDAIATVNKQE 538 LS++ + K + Sbjct: 402 FKLSIKRLSSDPWETVKDKYQKGQ 425 Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats. Identities = 91/427 (21%), Positives = 205/427 (48%), Gaps = 22/427 (5%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE---IQVGDEVDVALD 73 + + G ++ V + ++V+ + I + E +G ++ + Sbjct: 250 KYKTGDVLEAEVSEVMPFGIVVEH-EHNRGFIHISEISWHPIEELSKCYSLGQKLKARII 308 Query: 74 AVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPG 133 +++ LS ++ + W L + Y+ +TV GVI + ++ + F+ Sbjct: 309 EIDEKGRNYKLSVKQLDENP-WDKLVENYKVGDTVEGVIEKILDFAILPSVDDVLGFIHI 367 Query: 134 SLVD--VRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQE 191 S + G ++ K+I+L++ +S + + +D+ Q+ Sbjct: 368 SEISWGAHTGVIEQFKLGDTVKAKIIELNKDAKIFKLSIKRLSSDPWETVKDKY----QK 423 Query: 192 GMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDR 250 G ++ +K + D+ V++ V+G++HI++++++RV + E VG++I K+L+F+ Sbjct: 424 GQILEREIKEILDFALLVEMEENVEGMVHISEISYRRVNNLKEKFTVGEKIKFKILEFNE 483 Query: 251 ERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMD 310 E+ RVSL +K + +D W I +Y +++G+V N+ +YG F E+E+G+E +H ++ Sbjct: 484 EKRRVSLSMKAILDDIWANIHDKYTLNQEVSGKVINIQEYGIFAELEDGLEVFIHRNDFS 543 Query: 311 WTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGK 370 W + K +GD+V +L IDE+ ++IS G+KQ +PW++ + G++V+ Sbjct: 544 WEKEE---HKEYKLGDIVNFRILKIDEKEKKISGGIKQLTQSPWKEMESMYKIGNKVKVS 600 Query: 371 IKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERIS 430 +++ + G + L L+ ++ N GD + ++ ++ +R+ + Sbjct: 601 VENEIENGYIVKLTDRFSALIPKKELPENTT-------LAVGDTVEGIITEMHEKRKSVI 653 Query: 431 LGVKQLA 437 L VK+++ Sbjct: 654 LSVKKIS 660 >UniRef50_B1I3Y7 Hydroxymethylbutenyl pyrophosphate reductase n=3 Tax=Clostridiales RepID=B1I3Y7_DESAP Length = 677 Score = 365 bits (936), Expect = 3e-99, Method: Composition-based stats. Identities = 148/349 (42%), Positives = 219/349 (62%), Gaps = 5/349 (1%) Query: 18 TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQGELEIQVGDEVDVALDA 74 R G IVRGV+V + +D VLVD G KSE +P + + + +QVGDE+DV + Sbjct: 318 LRSGDIVRGVIVQVGQDEVLVDVGAKSEGVVPLRELSCYDVSSPDEVVQVGDEIDVWVVK 377 Query: 75 VEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGS 134 ED G +LS+ +A +AW TL+KA+ ETV GV+ VKGG V+L G+R+FLP S Sbjct: 378 AEDNEGRIILSKGRADAVKAWDTLDKAFHGGETVRGVVREVVKGGLLVDL-GVRSFLPAS 436 Query: 135 LVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGME 194 V+ V D G+E+ ++I+L++ R V++SR+ ++E E S +R + LE QEG Sbjct: 437 QVERGYVEDLSQYVGREISARIIELNKARKKVILSRKVLLEEEYSRKRKETLETTQEGDV 496 Query: 195 VKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTR 254 VKG+V+ LT +GAFVD+GG+DGLLHI++++W R+ HPSE++ VGDE+ V+VL+ DRE + Sbjct: 497 VKGVVRRLTQFGAFVDIGGLDGLLHISEISWHRINHPSEVLKVGDELEVQVLRIDRENEK 556 Query: 255 VSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNK 314 VSL LKQ+ +PW + + YP G+ ++ RV L +G FVE+E GVEGLVH+S + Sbjct: 557 VSLSLKQVLPNPWEQVVENYPVGSVVSARVVRLVPFGAFVELEPGVEGLVHISHLA-DWH 615 Query: 315 NIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNK 363 P V+ G + V VL +D+E +RI L L++ + + Sbjct: 616 VAKPEDVIAEGQQINVKVLSVDDENKRIRLSLREVVKDKDYHNDQGSEV 664 Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats. Identities = 99/374 (26%), Positives = 182/374 (48%), Gaps = 18/374 (4%) Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 + +L+ G V+G++ + VD+G +G++ + +++ V P E+V VGDEI V Sbjct: 315 VRSLRSGDIVRGVIVQVGQDEVLVDVGAKSEGVVPLRELSCYDVSSPDEVVQVGDEIDVW 374 Query: 245 VLKFDRERTRVSLGL-KQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGL 303 V+K + R+ L + W + K + G + G V + G V++ GV Sbjct: 375 VVKAEDNEGRIILSKGRADAVKAWDTLDKAFHGGETVRGVVREVVKGGLLVDL--GVRSF 432 Query: 304 VHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPW----QQFAE 359 + S+++ S+ V G + ++++++ R+++ L K + ++ E Sbjct: 433 LPASQVERGY-VEDLSQYV--GREISARIIELNKARKKVILSRKVLLEEEYSRKRKETLE 489 Query: 360 THNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVV 419 T +GD V+G ++ +T FG F+ + GG+DGL+H+S+ISW+ K GDE+ V Sbjct: 490 TTQEGDVVKGVVRRLTQFGAFVDI-GGLDGLLHISEISWHRIN-HPSEVLKVGDELEVQV 547 Query: 420 LQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLR 479 L++D E E++SL +KQ+ +P+ V G++V+ +V + GA VEL GVEG + Sbjct: 548 LRIDRENEKVSLSLKQVLPNPWEQVVENYPVGSVVSARVVRLVPFGAFVELEPGVEGLVH 607 Query: 480 ASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQED 539 S + V V++ G ++ K VD +N+ I LS+R + + N Q Sbjct: 608 ISHLADWHVAKPEDVIAEGQQINVKVLSVDDENKRIRLSLREVVKDKD-----YHNDQGS 662 Query: 540 ANFSNNAMAEAFKA 553 + + Sbjct: 663 EVTIGDVFGDLLHK 676 Score = 90.4 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 38/201 (18%), Positives = 85/201 (42%), Gaps = 12/201 (5%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL 60 + E +++ +E+L+ T+ G +V+GVV + + VD G + + + + Sbjct: 476 LEEEYSRKRKETLE--TTQEGDVVKGVVRRLTQFGAFVDIGG-LDGLLHISEISWHRINH 532 Query: 61 E---IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVK 117 ++VGDE++V + ++ + LS ++ W + + Y V+ + V Sbjct: 533 PSEVLKVGDELEVQVLRIDRENEKVSLSLKQV-LPNPWEQVVENYPVGSVVSARVVRLVP 591 Query: 118 GGFTVELN-GIRAFLPGSLVDVRPVRDTLHLE--GKELEFKVIKLDQKRNNVVVSRRAVI 174 G VEL G+ + S + V + G+++ KV+ +D + + +S R V+ Sbjct: 592 FGAFVELEPGVEGLVHISHLADWHVAKPEDVIAEGQQINVKVLSVDDENKRIRLSLREVV 651 Query: 175 ESENSAERDQLLENLQEGMEV 195 + ++ + G Sbjct: 652 KDKDYHNDQG--SEVTIGDVF 670 >UniRef50_P46836 30S ribosomal protein S1 n=166 Tax=Actinobacteria (class) RepID=RS1_MYCLE Length = 481 Score = 365 bits (936), Expect = 4e-99, Method: Composition-based stats. Identities = 161/359 (44%), Positives = 231/359 (64%), Gaps = 7/359 (1%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK---NAQG 58 +E F ++++K G IV G +V +D+D VL+D G K+E IPA + + Sbjct: 19 SEDFLAAIDKTIKYFN--DGDIVEGTIVKVDRDEVLLDIGYKTEGVIPARELSIKHDVDP 76 Query: 59 ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 + VGDEV+ + ED G +LS+++A+ AW T+E E E V G++ VKG Sbjct: 77 NEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALKEKDEAVKGIVIEVVKG 136 Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 G +++ G+R FLP SLV++R VRD GKE+E K+I+LD+ RNNVV+SRRA +E Sbjct: 137 GLILDI-GLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNRNNVVLSRRAWLEQTQ 195 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVG 238 S R + L LQ+G KG+V ++ ++GAFVDLGGVDGL+H+++++WK + HPSE+V VG Sbjct: 196 SEVRSEFLNQLQKGAIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWKHIDHPSEVVQVG 255 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE 298 +E+TV+VL D +R RVSL LK EDPW A+ + G + G+VT L +G FV +EE Sbjct: 256 NEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGKVTKLVPFGAFVRVEE 315 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQF 357 G+EGLVH+SE+ + + P +VV VGD V V+DID ERRRISL LKQ + ++F Sbjct: 316 GIEGLVHISELAERHVEV-PDQVVAVGDDAMVKVIDIDLERRRISLSLKQANEDYIEEF 373 Score = 257 bits (656), Expect = 9e-67, Method: Composition-based stats. Identities = 107/381 (28%), Positives = 188/381 (49%), Gaps = 17/381 (4%) Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVG 238 A D+ ++ +G V+G + + +D+G +G++ +++ K P+E+V+VG Sbjct: 24 AAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTEGVIPARELSIKHDVDPNEVVSVG 83 Query: 239 DEITVKVLKFDRERTRVSLGLKQLG-EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE 297 DE+ VL + + R+ L K+ E W I + + G V + G ++I Sbjct: 84 DEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALKEKDEAVKGIVIEVVKGGLILDI- 142 Query: 298 EGVEGLVHVSEMDWTN-KNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLK----QCKAN 352 G+ G + S ++ +++ P +G +E ++++D+ R + L + Q ++ Sbjct: 143 -GLRGFLPASLVEMRRVRDLQP----YIGKEIEAKIIELDKNRNNVVLSRRAWLEQTQSE 197 Query: 353 PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKG 412 +F KG +G + SI +FG F+ L GG+DGLVH+S++SW + + G Sbjct: 198 VRSEFLNQLQKGAIRKGVVSSIVNFGAFVDL-GGVDGLVHVSELSWKHI-DHPSEVVQVG 255 Query: 413 DEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELAD 472 +E+ VL VD +RER+SL +K EDP+ ++ + G IV GKVT + GA V + + Sbjct: 256 NEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGKVTKLVPFGAFVRVEE 315 Query: 473 GVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEA--DEKDA 530 G+EG + SE + VE V++VGD+ K +D + R ISLS++ +E +E D Sbjct: 316 GIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISLSLKQANEDYIEEFDP 375 Query: 531 IATVNKQEDANFSNNAMAEAF 551 N E F Sbjct: 376 AKYGMADSYDEQGNYIFPEGF 396 >UniRef50_Q67NT8 30S ribosomal protein S1 n=1 Tax=Symbiobacterium thermophilum RepID=Q67NT8_SYMTH Length = 441 Score = 361 bits (928), Expect = 3e-98, Method: Composition-based stats. Identities = 148/335 (44%), Positives = 225/335 (67%), Gaps = 7/335 (2%) Query: 18 TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ----GELEIQVGDEVDVALD 73 +PG IVRG VV + D ++VD G KSE IP + + + ++VGDEV V + Sbjct: 53 PKPGDIVRGQVVRVSDDSIMVDVGYKSEGIIPLNELSHRPLRSAHDAGLKVGDEVQVVVL 112 Query: 74 AVE-DGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLP 132 +V+ G G +S+ +A AW +E+ +E E + + VKGG V+L G+RAFLP Sbjct: 113 SVDTKGEGGLRISKRRADEQLAWAEVERKFEAGEVIEAEVTEAVKGGLVVDL-GLRAFLP 171 Query: 133 GSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEG 192 S VD V D G+++ K+I+LD + V++SR+ V+E+E +A R++ +QEG Sbjct: 172 ASQVDRGYVADLSKFVGQKIRVKIIELDPYKGRVILSRKQVLEAERTAARERFWSTVQEG 231 Query: 193 MEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRER 252 ++G VK++TD+GAF+DLGGVDGLLHI++M++ R+KHPS++V+ G+ I VKVL+ DRE+ Sbjct: 232 DVLEGTVKSITDFGAFIDLGGVDGLLHISEMSYGRIKHPSQVVSEGERIKVKVLRLDREK 291 Query: 253 TRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWT 312 +VSLGLKQ+ DPW ++ ++YPEG + G V LT +G FVE+E GV+GL+H+S+M Sbjct: 292 GKVSLGLKQVLPDPWDSVEEKYPEGAIVEGTVARLTTFGAFVELEPGVDGLIHISQMADR 351 Query: 313 NKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLK 347 N +P +VV++GDVV+V V+++D + RRISL L+ Sbjct: 352 RIN-NPGEVVSIGDVVKVKVINVDAQNRRISLSLR 385 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 113/370 (30%), Positives = 193/370 (52%), Gaps = 17/370 (4%) Query: 190 QEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEI-VNVGDEITVKVLK 247 + G V+G V ++D VD+G +G++ + +++ + ++ + + VGDE+ V VL Sbjct: 54 KPGDIVRGQVVRVSDDSIMVDVGYKSEGIIPLNELSHRPLRSAHDAGLKVGDEVQVVVLS 113 Query: 248 FDRERT---RVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLV 304 D + R+S + + W + +++ G + VT G V++ G+ + Sbjct: 114 VDTKGEGGLRIS-KRRADEQLAWAEVERKFEAGEVIEAEVTEAVKGGLVVDL--GLRAFL 170 Query: 305 HVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN----PWQQFAET 360 S++D SK V G + V ++++D + R+ L KQ ++F T Sbjct: 171 PASQVDRGY-VADLSKFV--GQKIRVKIIELDPYKGRVILSRKQVLEAERTAARERFWST 227 Query: 361 HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL 420 +GD +EG +KSITDFG FI L GG+DGL+H+S++S+ + + +G+ I VL Sbjct: 228 VQEGDVLEGTVKSITDFGAFIDL-GGVDGLLHISEMSYGRI-KHPSQVVSEGERIKVKVL 285 Query: 421 QVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRA 480 ++D E+ ++SLG+KQ+ DP+++ +GAIV G V + GA VEL GV+G + Sbjct: 286 RLDREKGKVSLGLKQVLPDPWDSVEEKYPEGAIVEGTVARLTTFGAFVELEPGVDGLIHI 345 Query: 481 SEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDA 540 S+ + R+ + V+S+GD V+ K VD +NR ISLS+RA E +AIA Sbjct: 346 SQMADRRINNPGEVVSIGDVVKVKVINVDAQNRRISLSLRAAIEELAAEAIAADVATPYR 405 Query: 541 NFSNNAMAEA 550 + EA Sbjct: 406 DVVPAEAGEA 415 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 71/253 (28%), Positives = 129/253 (50%), Gaps = 13/253 (5%) Query: 15 EIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQ-VGDEVDVALD 73 E + G ++ V K ++VD GL+ + +PA Q + VG ++ V + Sbjct: 139 ERKFEAGEVIEAEVTEAVKGGLVVDLGLR--AFLPASQVDRGYVADLSKFVGQKIRVKII 196 Query: 74 AVEDGFGETLLSREK---AKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAF 130 ++ G +LSR++ A+R A ++ + + G + G ++L G+ Sbjct: 197 ELDPYKGRVILSRKQVLEAERTAARERFWSTVQEGDVLEGTVKSITDFGAFIDLGGVDGL 256 Query: 131 LPGSLVDVRPVRDTLHLE--GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLEN 188 L S + ++ + G+ ++ KV++LD+++ V + + V+ D + E Sbjct: 257 LHISEMSYGRIKHPSQVVSEGERIKVKVLRLDREKGKVSLGLKQVL----PDPWDSVEEK 312 Query: 189 LQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLK 247 EG V+G V LT +GAFV+L GVDGL+HI+ MA +R+ +P E+V++GD + VKV+ Sbjct: 313 YPEGAIVEGTVARLTTFGAFVELEPGVDGLIHISQMADRRINNPGEVVSIGDVVKVKVIN 372 Query: 248 FDRERTRVSLGLK 260 D + R+SL L+ Sbjct: 373 VDAQNRRISLSLR 385 >UniRef50_A4J3N5 Hydroxymethylbutenyl pyrophosphate reductase n=3 Tax=Clostridia RepID=A4J3N5_DESRM Length = 672 Score = 361 bits (928), Expect = 3e-98, Method: Composition-based stats. Identities = 146/366 (39%), Positives = 225/366 (61%), Gaps = 5/366 (1%) Query: 6 AQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK---NAQGELEI 62 + E+++ + G +V+G+VV + D VLVD KSE IP ++ + + Sbjct: 283 EEGMSEAMEVKSPQAGELVKGIVVQVGMDEVLVDIRAKSEGVIPRKEMAFYGVDNLQEIV 342 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 +VGDE++ + ED G+ +LS+E+A +AW LE+A E + GV+ VKGG V Sbjct: 343 KVGDEIECVVIKAEDNEGKIILSKERADAEKAWDGLEEAMEQGTIIKGVVREVVKGGMLV 402 Query: 123 ELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 ++ G+RAFLP SLV+ V D +E E +VI+++++R VVVSR+AV+E +N+ +R Sbjct: 403 DV-GVRAFLPASLVERGYVEDLSKYLNQEFEVRVIEMNKQRKKVVVSRKAVLEEQNARKR 461 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 ++LL +LQEG VKGIV+ +T++GAFVDLGG+DGLLHI++M+W R+ HP E+V VGDE+ Sbjct: 462 EELLASLQEGQIVKGIVRRITNFGAFVDLGGLDGLLHISEMSWHRINHPQEVVKVGDELE 521 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 V VLK D + ++SLGLKQ+ +PW + ++YP G +V L +G FV++E GVEG Sbjct: 522 VMVLKVDTQNEKISLGLKQVLPNPWDNVEEKYPVGNIFNAKVVRLAPFGAFVQLEPGVEG 581 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHN 362 LVH+S + P VV G+ V+V VL +D +R+ L +++ Sbjct: 582 LVHISHLA-DRHVEKPEDVVKEGEEVQVKVLSMDPSEKRVRLSIREVNGERRSAREARPR 640 Query: 363 KGDRVE 368 K + V+ Sbjct: 641 KQEEVQ 646 Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats. Identities = 108/365 (29%), Positives = 181/365 (49%), Gaps = 13/365 (3%) Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 +++ Q G VKGIV + VD+ +G++ +MA+ V + EIV VGDEI Sbjct: 292 VKSPQAGELVKGIVVQVGMDEVLVDIRAKSEGVIPRKEMAFYGVDNLQEIVKVGDEIECV 351 Query: 245 VLKFDRERTRVSLGL-KQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGL 303 V+K + ++ L + E W + + +GT + G V + G V++ GV Sbjct: 352 VIKAEDNEGKIILSKERADAEKAWDGLEEAMEQGTIIKGVVREVVKGGMLVDV--GVRAF 409 Query: 304 VHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAE---- 359 + S + SK +N EV V++++++R+++ + K + E Sbjct: 410 LPAS-LVERGYVEDLSKYLN--QEFEVRVIEMNKQRKKVVVSRKAVLEEQNARKREELLA 466 Query: 360 THNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVV 419 + +G V+G ++ IT+FG F+ L GG+DGL+H+S++SW+ K GDE+ +V Sbjct: 467 SLQEGQIVKGIVRRITNFGAFVDL-GGLDGLLHISEMSWHRIN-HPQEVVKVGDELEVMV 524 Query: 420 LQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLR 479 L+VD + E+ISLG+KQ+ +P++N G I KV + GA V+L GVEG + Sbjct: 525 LKVDTQNEKISLGLKQVLPNPWDNVEEKYPVGNIFNAKVVRLAPFGAFVQLEPGVEGLVH 584 Query: 480 ASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQED 539 S + VE V+ G+EV+ K +D + + LS+R + A KQE+ Sbjct: 585 ISHLADRHVEKPEDVVKEGEEVQVKVLSMDPSEKRVRLSIREVNGERRSAREARPRKQEE 644 Query: 540 ANFSN 544 N Sbjct: 645 VQEQN 649 >UniRef50_O67462 Ribosomal protein S01 n=2 Tax=Aquificaceae RepID=O67462_AQUAE Length = 535 Score = 358 bits (920), Expect = 2e-97, Method: Composition-based stats. Identities = 170/557 (30%), Positives = 272/557 (48%), Gaps = 31/557 (5%) Query: 2 TESFAQLFEESLKEIE-TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL 60 F +L EES+ E + G +V+G VV + D V VD G K+E+ I E+ Sbjct: 1 MNEFEKLLEESIASPEEFKRGQVVKGRVVKVAGDTVFVDIGYKTEAVISKEEVP------ 54 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 E+Q G E++ L +LS + + + L++AY + V G I KVKGGF Sbjct: 55 EVQEGQEIEAVLVRFSPRIPNPVLSVKPLQEKKELEKLKEAYLNKSDVVGKIEKKVKGGF 114 Query: 121 TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVI--KLDQKRNNVVVSRRAVIESEN 178 V+ G++AFLP S + G+ L FKV+ KLD KR ++VS +A ++ + Sbjct: 115 IVDFEGVKAFLPMSQAGKKLKE------GQVLTFKVLDFKLDSKRPQIIVSHKAYLDEQR 168 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTD-YGAFVDLGGV-DGLLHITDMAWKRVKHPSEIVN 236 + +LL L+ G V+G V + G + + GV L +++W R K+P + Sbjct: 169 EKRKQELLNTLKPGDVVEGKVVKIDPNKGVTLVIEGVLRAFLPKEELSWGRDKNPYNYTD 228 Query: 237 VGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI 296 VG+ + VKV + D+++ + + L++L +PW K + EG + GRV +T G VE+ Sbjct: 229 VGETLKVKVKRVDKQKGFIIVSLRELKGNPWEKFLKEHKEGDVIEGRVVAVTPKGVVVEV 288 Query: 297 EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQ 356 EGVEG V E+ W K GD+V+ ++ ID +RRR+ L +K+ + PW+ Sbjct: 289 MEGVEGFVPEEELAWEGKPE-----FKKGDLVKAKIMKIDPKRRRLILSIKRAQPRPWEI 343 Query: 357 FAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIA 416 F + H G +V+GK+ I + L+ G+ G++H SD+SW + K+G+E Sbjct: 344 FLQKHPVGSKVKGKVIKIEGSRAIVELEDGVKGVIHRSDLSWTR-PKRVEEVLKEGEERE 402 Query: 417 AVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEG 476 VL + E + + LG+KQL E+P+ K G +V V + GA +E +GVEG Sbjct: 403 FAVLGL--EGKYVKLGLKQLTENPWEKVKEKYKVGDVVKLPVKELAPFGAFLEFPEGVEG 460 Query: 477 YLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNK 536 L SE R + + G E E K ++ K I+ S+ A ++ V + Sbjct: 461 LLPFSEVPR------HIRIRKGQEYEVKIIDINPKEGKITFSINALYGEKPEEKEEKVEE 514 Query: 537 QEDANFSNNAMAEAFKA 553 A + E K Sbjct: 515 VTTATTGGFKLGEILKK 531 >UniRef50_D2L2R4 RNA binding S1 domain protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L2R4_9DELT Length = 507 Score = 356 bits (914), Expect = 1e-96, Method: Composition-based stats. Identities = 145/434 (33%), Positives = 232/434 (53%), Gaps = 10/434 (2%) Query: 4 SFAQLFEESLKEI--ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE 61 FA L E SL E E G + G V+A+ V+VD G K + +F + G L Sbjct: 16 EFAALMEASLAERGGEISVGDRITGPVIAVTDTTVVVDTGTKLDGVADKSEFLDENGALT 75 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 I G+ V + + +V LS+ L A+E V G + KGGF Sbjct: 76 ISEGEAVTLYVVSVRGDE--VALSK-ALTGQGGAEALLAAFEAGVPVEGKVTASRKGGFD 132 Query: 122 VELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 VE+ RAF P S +D+ + G+ F + ++ N+VVSRR + E E + Sbjct: 133 VEILHRRAFCPVSQIDLAFTDNPEVHVGQTYTFLITTFERDGKNIVVSRRKLQEQERAES 192 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 + LE++ G + +V +GAFV++ G++GL+H+++++W R + + V++G Sbjct: 193 ELRFLESVNPGDVIPAVVTRFAAFGAFVEVAPGLEGLVHLSELSWSRAEKAEDAVDLGQA 252 Query: 241 ITVKVLKFDRERT---RVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE 297 +TVKVL FDR++ R+SL +KQ G DPW + +++ G ++ G+VT L D+G FVEI Sbjct: 253 VTVKVLSFDRDKKGRPRISLSIKQAGPDPWDTVGEKFAAGDRVEGKVTRLADFGAFVEIA 312 Query: 298 EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQF 357 G+EGL+HVSEM + PS VV+ G+ V V V D+D +RRISL LK+ +PW Sbjct: 313 PGIEGLIHVSEMSHVRRIAKPSDVVSPGETVTVAVKDVDLSKRRISLSLKEVAGDPWAAV 372 Query: 358 AETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAA 417 ++T G VEG +++ +G+FI L G+ GL+ S + + + GD ++ Sbjct: 373 SDTFAIGSTVEGTVENRQQYGLFINLAPGVTGLLPASKL-RDALEPAPYEKVSSGDTVSV 431 Query: 418 VVLQVDAERERISL 431 VV ++D E+ +++L Sbjct: 432 VVSEIDTEKRKMTL 445 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 103/371 (27%), Positives = 169/371 (45%), Gaps = 12/371 (3%) Query: 192 GMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRE 251 G+ V+G V G V++ ++ + +P V+VG T + F+R+ Sbjct: 116 GVPVEGKVTASRKGGFDVEILHRRAFCPVSQIDLAFTDNPE--VHVGQTYTFLITTFERD 173 Query: 252 RTRVSLGLKQLGE----DPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVS 307 + + ++L E + + + G + VT +G FVE+ G+EGLVH+S Sbjct: 174 GKNIVVSRRKLQEQERAESELRFLESVNPGDVIPAVVTRFAAFGAFVEVAPGLEGLVHLS 233 Query: 308 EMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERR---RISLGLKQCKANPWQQFAETHNKG 364 E+ W+ + V++G V V VL D +++ RISL +KQ +PW E G Sbjct: 234 ELSWS-RAEKAEDAVDLGQAVTVKVLSFDRDKKGRPRISLSIKQAGPDPWDTVGEKFAAG 292 Query: 365 DRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDA 424 DRVEGK+ + DFG F+ + GI+GL+H+S++S + G+ + V VD Sbjct: 293 DRVEGKVTRLADFGAFVEIAPGIEGLIHVSEMSHVRRIAKPSDVVSPGETVTVAVKDVDL 352 Query: 425 ERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEAS 484 + RISL +K++A DP+ G+ V G V G + LA GV G L AS+ Sbjct: 353 SKRRISLSLKEVAGDPWAAVSDTFAIGSTVEGTVENRQQYGLFINLAPGVTGLLPASKLR 412 Query: 485 RDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSN 544 +S GD V + +D + R ++L+ E++ + D + N Sbjct: 413 DALEPAPYEKVSSGDTVSVVVSEIDTEKRKMTLA--PVGGTKEREFTRDRGEYRDRDRDN 470 Query: 545 NAMAEAFKAAK 555 N + K K Sbjct: 471 NDWKQYAKKEK 481 Score = 48.8 bits (115), Expect = 5e-04, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 65/168 (38%), Gaps = 9/168 (5%) Query: 363 KGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQV 422 GDR+ G + ++TD + + +DG+ S+ E +G+ + V+ V Sbjct: 34 VGDRITGPVIAVTDTTVVVDTGTKLDGVADKSEF----LDENGALTISEGEAVTLYVVSV 89 Query: 423 DAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASE 482 + ++L + +A + G V GKVTA G VE+ + S+ Sbjct: 90 RGDE--VALSKALTGQGGAEALLAAFEAGVPVEGKVTASRKGGFDVEIL-HRRAFCPVSQ 146 Query: 483 ASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDA 530 ++ + VG T +R + I +S R E + ++ Sbjct: 147 IDLAFTDNPE--VHVGQTYTFLITTFERDGKNIVVSRRKLQEQERAES 192 >UniRef50_C0GDV0 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GDV0_9FIRM Length = 678 Score = 356 bits (913), Expect = 2e-96, Method: Composition-based stats. Identities = 144/375 (38%), Positives = 231/375 (61%), Gaps = 6/375 (1%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQV---GDEVDVALD 73 E G +V G VV + D VLVD G KSE +P ++ ++ V G EV+VA+ Sbjct: 302 EFSAGDVVTGTVVQVSDDEVLVDIGYKSEGVLPRQEVILEGDQMLADVMENGQEVEVAVK 361 Query: 74 AVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNG-IRAFLP 132 V+D G +LSR+ +R + W LEKA+E+ ++G + V G VEL G AF+P Sbjct: 362 KVDDQEGRIILSRKAIERKQKWAELEKAFEEGTILSGKVKEAVPAGLVVELGGGYDAFMP 421 Query: 133 GSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEG 192 GSLVDVR + D +G+E+ FK+I++ ++ +++SR+ V+E E + ++D++L L+ G Sbjct: 422 GSLVDVRYIPDFNEFQGQEISFKIIEMRPEKEKLILSRKQVLEEEAAVQKDKVLAELEPG 481 Query: 193 MEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRER 252 +KG VK LT++GAFVD+GG+DGL+HI++++W R+ +P E+++VGDEI VKV++ ER Sbjct: 482 QIIKGTVKRLTNFGAFVDVGGIDGLVHISEISWHRIDNPGEVLSVGDEIEVKVIEVIPER 541 Query: 253 TRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWT 312 R+ L L+Q DPW + +++ G + G+VT + D+G FVE+ GVEGLVH+S++ Sbjct: 542 ERIGLSLRQAQPDPWTEVGQKFSAGDVVEGKVTRIVDFGAFVELIPGVEGLVHISQLANY 601 Query: 313 NKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIK 372 + PS+VV GDVV+V +LDI+ + +R+SL ++ P ++ + G Sbjct: 602 H-VKQPSEVVQQGDVVKVKILDINTDGKRVSLSMRDAAPRPKKEQTRQVQQQPEDTGTGV 660 Query: 373 SITD-FGIFIGLDGG 386 ++ D FG L+ Sbjct: 661 TLGDVFGDLFDLEKD 675 Score = 271 bits (692), Expect = 7e-71, Method: Composition-based stats. Identities = 106/407 (26%), Positives = 191/407 (46%), Gaps = 14/407 (3%) Query: 151 ELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVD 210 ++ + K++ ++N + + E DQ ++ G V G V ++D VD Sbjct: 268 TIKEVIGKMENEKNTELQEEQTATEE---VSLDQEIKEFSAGDVVTGTVVQVSDDEVLVD 324 Query: 211 LG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLG-EDPWV 268 +G +G+L ++ + + ++++ G E+ V V K D + R+ L K + + W Sbjct: 325 IGYKSEGVLPRQEVILEGDQMLADVMENGQEVEVAVKKVDDQEGRIILSRKAIERKQKWA 384 Query: 269 AIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVV 328 + K + EGT L+G+V G VE+ G + + S + ++ G + Sbjct: 385 ELEKAFEEGTILSGKVKEAVPAGLVVELGGGYDAFMPGS-LVDVRYIPDFNEF--QGQEI 441 Query: 329 EVMVLDIDEERRRISLGLKQCKANPWQQFAET----HNKGDRVEGKIKSITDFGIFIGLD 384 ++++ E+ ++ L KQ + G ++G +K +T+FG F+ + Sbjct: 442 SFKIIEMRPEKEKLILSRKQVLEEEAAVQKDKVLAELEPGQIIKGTVKRLTNFGAFVDV- 500 Query: 385 GGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNW 444 GGIDGLVH+S+ISW+ + GDEI V++V ERERI L ++Q DP+ Sbjct: 501 GGIDGLVHISEISWHRI-DNPGEVLSVGDEIEVKVIEVIPERERIGLSLRQAQPDPWTEV 559 Query: 445 VALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAK 504 G +V GKVT + GA VEL GVEG + S+ + V+ + V+ GD V+ K Sbjct: 560 GQKFSAGDVVEGKVTRIVDFGAFVELIPGVEGLVHISQLANYHVKQPSEVVQQGDVVKVK 619 Query: 505 FTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAF 551 ++ + +SLS+R +K+ V +Q + + + + F Sbjct: 620 ILDINTDGKRVSLSMRDAAPRPKKEQTRQVQQQPEDTGTGVTLGDVF 666 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 112/418 (26%), Positives = 204/418 (48%), Gaps = 17/418 (4%) Query: 67 EVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN- 125 + + +E+ L + A + K + + VTG + V++ Sbjct: 268 TIKEVIGKMENEKNTELQEEQTATEEVSLDQEIKEFSAGDVVTGTVVQVSDDEVLVDIGY 327 Query: 126 GIRAFLPGSLVDVRPVRDTLHLE--GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERD 183 LP V + + + G+E+E V K+D + +++SR+A+ + AE + Sbjct: 328 KSEGVLPRQEVILEGDQMLADVMENGQEVEVAVKKVDDQEGRIILSRKAIERKQKWAELE 387 Query: 184 QLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 + E EG + G VK G V+L GG D + + + + + +E G EI+ Sbjct: 388 KAFE---EGTILSGKVKEAVPAGLVVELGGGYDAFMPGSLVDVRYIPDFNEF--QGQEIS 442 Query: 243 VKVLKFDRERTRVSLGLKQLGED----PWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE 298 K+++ E+ ++ L KQ+ E+ + G + G V LT++G FV++ Sbjct: 443 FKIIEMRPEKEKLILSRKQVLEEEAAVQKDKVLAELEPGQIIKGTVKRLTNFGAFVDVG- 501 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFA 358 G++GLVH+SE+ W ++ +P +V++VGD +EV V+++ ER RI L L+Q + +PW + Sbjct: 502 GIDGLVHISEISW-HRIDNPGEVLSVGDEIEVKVIEVIPERERIGLSLRQAQPDPWTEVG 560 Query: 359 ETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAV 418 + + GD VEGK+ I DFG F+ L G++GLVH+S ++ N ++ ++GD + Sbjct: 561 QKFSAGDVVEGKVTRIVDFGAFVELIPGVEGLVHISQLA-NYHVKQPSEVVQQGDVVKVK 619 Query: 419 VLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGK-VTAVDAKGATVELADGVE 475 +L ++ + +R+SL ++ A P ++ TG VT D G +L E Sbjct: 620 ILDINTDGKRVSLSMRDAAPRPKKEQTRQVQQQPEDTGTGVTLGDVFGDLFDLEKDKE 677 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 68/292 (23%), Positives = 126/292 (43%), Gaps = 15/292 (5%) Query: 15 EIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAE--QFKNAQGELEIQVGDEVDVAL 72 E G+I+ G V ++V+ G ++ +P + E Q G E+ + Sbjct: 387 EKAFEEGTILSGKVKEAVPAGLVVELGGGYDAFMPGSLVDVRYIPDFNEFQ-GQEISFKI 445 Query: 73 DAVEDGFGETLLSREKAKRHEA---WITLEKAYEDAETVTGVINGKVKGGFTVELNGIRA 129 + + +LSR++ EA + E + + G + G V++ GI Sbjct: 446 IEMRPEKEKLILSRKQVLEEEAAVQKDKVLAELEPGQIIKGTVKRLTNFGAFVDVGGIDG 505 Query: 130 FLPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLE 187 + S + + + + G E+E KVI++ +R + +S R ++ + Sbjct: 506 LVHISEISWHRIDNPGEVLSVGDEIEVKVIEVIPERERIGLSLRQA----QPDPWTEVGQ 561 Query: 188 NLQEGMEVKGIVKNLTDYGAFVD-LGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVL 246 G V+G V + D+GAFV+ + GV+GL+HI+ +A VK PSE+V GD + VK+L Sbjct: 562 KFSAGDVVEGKVTRIVDFGAFVELIPGVEGLVHISQLANYHVKQPSEVVQQGDVVKVKIL 621 Query: 247 KFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE 298 + + RVSL ++ P + + T +T F ++ + Sbjct: 622 DINTDGKRVSLSMRDAAPRPKKE--QTRQVQQQPEDTGTGVTLGDVFGDLFD 671 >UniRef50_UPI0001C3232B RNA binding S1 domain protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3232B Length = 529 Score = 355 bits (912), Expect = 2e-96, Method: Composition-based stats. Identities = 155/336 (46%), Positives = 227/336 (67%), Gaps = 5/336 (1%) Query: 18 TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQ---FKNAQGELEIQVGDEVDVALDA 74 G +V G VV IDKD VLVD G KSE IP+ + K+ + E+++G+EVD + Sbjct: 38 FEEGDVVTGHVVRIDKDEVLVDIGYKSEGVIPSNELSIRKSVDPKDEVEMGEEVDALVLT 97 Query: 75 VEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGS 134 ED G +LS+++A+ +AW +E A E E V G + VKGG ++L G+R FLP S Sbjct: 98 KEDQDGRLILSKKRARFEKAWRRIEAAAESGEPVDGTVIEVVKGGLIIDL-GVRGFLPAS 156 Query: 135 LVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGME 194 LVD+R V G+ +E +VI+L++ RNNVV+SRRAV+E + +R+++L+ LQ GM Sbjct: 157 LVDIRRVPHLDEYLGQTIECRVIELNRSRNNVVLSRRAVLEEQRREDRERILDRLQPGMI 216 Query: 195 VKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTR 254 V+G + N+ D+GAFVDL G+DGL+HI++++W V HPSEI+++GD ++VKVL DR+R R Sbjct: 217 VEGTISNIVDFGAFVDLDGIDGLIHISELSWSHVNHPSEILSIGDTVSVKVLDIDRDRQR 276 Query: 255 VSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNK 314 +SLGLKQ EDPW + Y G +L GRVT + +G FVEI +GVEGLVH+SE+ + Sbjct: 277 ISLGLKQTQEDPWQRVVDTYNVGDELEGRVTKVVTFGAFVEILDGVEGLVHISELA-QHH 335 Query: 315 NIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCK 350 +P +++ D V+V +L+ID ERRR+SL +K+ + Sbjct: 336 VENPREIIQPNDEVKVKILEIDSERRRLSLSIKRVE 371 Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 102/347 (29%), Positives = 172/347 (49%), Gaps = 13/347 (3%) Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEI 241 D L +EG V G V + VD+G +G++ +++ ++ P + V +G+E+ Sbjct: 32 DATLTPFEEGDVVTGHVVRIDKDEVLVDIGYKSEGVIPSNELSIRKSVDPKDEVEMGEEV 91 Query: 242 TVKVLKFDRERTRVSLGLKQL-GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV 300 VL + + R+ L K+ E W I G + G V + G +++ GV Sbjct: 92 DALVLTKEDQDGRLILSKKRARFEKAWRRIEAAAESGEPVDGTVIEVVKGGLIIDL--GV 149 Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC----KANPWQQ 356 G + S + + H + + G +E V++++ R + L + + ++ Sbjct: 150 RGFLPAS-LVDIRRVPHLDEYL--GQTIECRVIELNRSRNNVVLSRRAVLEEQRREDRER 206 Query: 357 FAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIA 416 + G VEG I +I DFG F+ LD GIDGL+H+S++SW+ GD ++ Sbjct: 207 ILDRLQPGMIVEGTISNIVDFGAFVDLD-GIDGLIHISELSWSHVN-HPSEILSIGDTVS 264 Query: 417 AVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEG 476 VL +D +R+RISLG+KQ EDP+ V G + G+VT V GA VE+ DGVEG Sbjct: 265 VKVLDIDRDRQRISLGLKQTQEDPWQRVVDTYNVGDELEGRVTKVVTFGAFVEILDGVEG 324 Query: 477 YLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKD 523 + SE ++ VE+ ++ DEV+ K +D + R +SLS++ + Sbjct: 325 LVHISELAQHHVENPREIIQPNDEVKVKILEIDSERRRLSLSIKRVE 371 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 69/295 (23%), Positives = 130/295 (44%), Gaps = 18/295 (6%) Query: 273 RYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMV 332 + EG +TG V + V+I EG++ +E+ K++ P V +G+ V+ +V Sbjct: 37 PFEEGDVVTGHVVRIDKDEVLVDIGYKSEGVIPSNELS-IRKSVDPKDEVEMGEEVDALV 95 Query: 333 LDIDEERRRISLGLKQCK-ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLV 391 L +++ R+ L K+ + W++ G+ V+G + + G+ I L G+ G + Sbjct: 96 LTKEDQDGRLILSKKRARFEKAWRRIEAAAESGEPVDGTVIEVVKGGLIIDL--GVRGFL 153 Query: 392 HLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQL----AEDPFNNWVAL 447 S + + EY G I V++++ R + L + + + + Sbjct: 154 PASLVDIRRVPH--LDEY-LGQTIECRVIELNRSRNNVVLSRRAVLEEQRREDRERILDR 210 Query: 448 NKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTG 507 + G IV G ++ + GA V+L DG++G + SE S V + +LS+GD V K Sbjct: 211 LQPGMIVEGTISNIVDFGAFVDL-DGIDGLIHISELSWSHVNHPSEILSIGDTVSVKVLD 269 Query: 508 VDRKNRAISLSVRAKDEADEKDAIATVNKQEDAN------FSNNAMAEAFKAAKG 556 +DR + ISL ++ E + + T N ++ + A E +G Sbjct: 270 IDRDRQRISLGLKQTQEDPWQRVVDTYNVGDELEGRVTKVVTFGAFVEILDGVEG 324 Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats. Identities = 68/264 (25%), Positives = 128/264 (48%), Gaps = 15/264 (5%) Query: 9 FEESLKEIET--RPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ-GELEIQVG 65 FE++ + IE G V G V+ + K +++D G++ +PA + L+ +G Sbjct: 114 FEKAWRRIEAAAESGEPVDGTVIEVVKGGLIIDLGVR--GFLPASLVDIRRVPHLDEYLG 171 Query: 66 DEVDVALDAVEDGFGETLLSREKA---KRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 ++ + + +LSR +R E + + V G I+ V G V Sbjct: 172 QTIECRVIELNRSRNNVVLSRRAVLEEQRREDRERILDRLQPGMIVEGTISNIVDFGAFV 231 Query: 123 ELNGIRAFLPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 +L+GI + S + V + G + KV+ +D+ R + + + E Sbjct: 232 DLDGIDGLIHISELSWSHVNHPSEILSIGDTVSVKVLDIDRDRQRISLGLKQTQED---- 287 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGD 239 ++++ G E++G V + +GAFV++ GV+GL+HI+++A V++P EI+ D Sbjct: 288 PWQRVVDTYNVGDELEGRVTKVVTFGAFVEILDGVEGLVHISELAQHHVENPREIIQPND 347 Query: 240 EITVKVLKFDRERTRVSLGLKQLG 263 E+ VK+L+ D ER R+SL +K++ Sbjct: 348 EVKVKILEIDSERRRLSLSIKRVE 371 Score = 89.6 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 41/170 (24%), Positives = 73/170 (42%), Gaps = 6/170 (3%) Query: 354 WQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGD 413 + +GD V G + I + + + +G++ +++S + + E + G+ Sbjct: 31 YDATLTPFEEGDVVTGHVVRIDKDEVLVDIGYKSEGVIPSNELSIRKSVD-PKDEVEMGE 89 Query: 414 EIAAVVLQVDAERERISLGVKQLA-EDPFNNWVALNKKGAIVTGKVTAVDAKGATVELAD 472 E+ A+VL + + R+ L K+ E + A + G V G V V G ++L Sbjct: 90 EVDALVLTKEDQDGRLILSKKRARFEKAWRRIEAAAESGEPVDGTVIEVVKGGLIIDL-- 147 Query: 473 GVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAK 522 GV G+L AS RV L G +E + ++R + LS RA Sbjct: 148 GVRGFLPASLVDIRRVPHLDEYL--GQTIECRVIELNRSRNNVVLSRRAV 195 Score = 43.0 bits (100), Expect = 0.033, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 25/76 (32%), Gaps = 3/76 (3%) Query: 20 PGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE---IQVGDEVDVALDAVE 76 G + G V + V+ E + + E IQ DEV V + ++ Sbjct: 298 VGDELEGRVTKVVTFGAFVEILDGVEGLVHISELAQHHVENPREIIQPNDEVKVKILEID 357 Query: 77 DGFGETLLSREKAKRH 92 LS ++ + Sbjct: 358 SERRRLSLSIKRVEGQ 373 >UniRef50_A1QYS7 SSU ribosomal protein S1P n=23 Tax=Borrelia RepID=A1QYS7_BORT9 Length = 555 Score = 355 bits (911), Expect = 3e-96, Method: Composition-based stats. Identities = 162/558 (29%), Positives = 289/558 (51%), Gaps = 15/558 (2%) Query: 2 TESFAQLFEESLKEIE-TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL 60 E+ L E LK +E GS V GVV+ + KD VLVD G KSE I ++F E Sbjct: 3 MENQEDLQENYLKVLEKVELGSSVSGVVINVMKDYVLVDIGYKSEGFIKIDEF-----ET 57 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 +GD++D + V G +LS K +++ + + + G I ++ G+ Sbjct: 58 IPSIGDKLDAIVTKVGGELG-LVLSVAKLDSLNLQDKIDEYISNRKVLKGKILAELSSGY 116 Query: 121 TVELN-GIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQ-KRNNVVVSRRAVIESEN 178 V++N + F+P L RD G +EF V++ D+ +++ RR + Sbjct: 117 KVQINENVIGFMPSYLSS--KFRDEKLKRGLVVEFYVVQADKTDGLRLILDRRTLERERE 174 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVD-GLLHITDMAWKRVKHPSEIVNV 237 ++ +L+ + EG V G+V+ +TDY A + + + G+LH ++A+ RV++ + + V Sbjct: 175 LVKKKELVSSYNEGDIVDGVVERITDYSAIIKVKNLVLGVLHKRNIAFNRVENIEDFIRV 234 Query: 238 GDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE 297 GD++ +K++K + ++ L LK L +PW ++ +Y + + G+V + +G VE++ Sbjct: 235 GDKLRLKIIKLNVNAVKMELSLKALKTNPWDSVEAKYKVESIVKGKVVKILPFGAVVELD 294 Query: 298 EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQF 357 + G +H+S W P ++V VG +VEV +L+ID+E ++ISLG+KQ NPW Sbjct: 295 SEISGFIHISNFSWVRVIKSPQELVKVGQIVEVKILEIDKENQKISLGIKQVNENPWNNL 354 Query: 358 AETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAA 417 A+ G V+G +K+IT G F+ ++ GID + DISW + +K G I+ Sbjct: 355 AQRCAVGKVVQGVVKNITKTGAFVSIEEGIDAYISKFDISW-IDEVNPEEYFKLGSSISG 413 Query: 418 VVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGY 477 V+++DA+++ I LG+KQL E+P++++ KKG + ++ +KG V + + G+ Sbjct: 414 KVIELDAKKQNIKLGIKQLEENPWDDFSKSYKKGDTLEVEIVEKKSKGVQVRVYGKIMGF 473 Query: 478 LRASEASRDRVEDAT--LVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVN 535 + + + L++GD+++ T +D KN+ + LS RA E + I++ Sbjct: 474 ISKIQLGDTKESSLETFENLNIGDKLKVIITNIDFKNKLVLLSYRAYKEQKSSEEISSYL 533 Query: 536 KQEDANFSNNAMAEAFKA 553 +ED S A K Sbjct: 534 FKEDDEESYKPFANLLKR 551 >UniRef50_B8CWY2 4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWY2_HALOH Length = 678 Score = 351 bits (900), Expect = 6e-95, Method: Composition-based stats. Identities = 139/353 (39%), Positives = 220/353 (62%), Gaps = 5/353 (1%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE---IQVGDEVDVALD 73 + + G V+G VV I + V VD G K+E IP + + E ++ G+E+DV + Sbjct: 302 DLKKGQQVKGKVVEIGDNGVYVDVGYKTEGLIPLRELSHRDFEDPHEIVEEGEEIDVIVL 361 Query: 74 AVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPG 133 +ED G +LS+++A +AW + KAYE+ E + + +VKGG V++ G+R F+ Sbjct: 362 TLEDEEGNMVLSKKRADFEKAWERILKAYENDEIIEAEVTREVKGGLVVDI-GLRGFVHA 420 Query: 134 SLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGM 193 S V + V D GK L KVI++++ +NNVV+S + V+E E ++++ LE LQEG Sbjct: 421 SHVAIGYVEDLSDYVGKTLRLKVIEVERDKNNVVLSAKKVLEEEREKQKEKTLEELQEGQ 480 Query: 194 EVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERT 253 VKG V + D+GAFVDLGG++GLLHI++M+W R++HPSE++ G EI VKVL ++E Sbjct: 481 VVKGKVTKIVDFGAFVDLGGIEGLLHISEMSWGRIEHPSEVLEEGQEIEVKVLAVNKEEE 540 Query: 254 RVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTN 313 R+SLGLKQL DPW AK++ EG ++G +T + D+G F+EIE G+EGL+H+S++ Sbjct: 541 RISLGLKQLLPDPWEEFAKKHYEGEVVSGTITKIVDFGAFMEIENGIEGLIHISQLSH-R 599 Query: 314 KNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDR 366 P +VV+VG+ ++ +++ID E++R+ L +K + P K + Sbjct: 600 HVKTPDEVVSVGEEIKAEIINIDPEQKRVGLSIKALEEQPETPKKVEAPKKEP 652 Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats. Identities = 115/374 (30%), Positives = 196/374 (52%), Gaps = 17/374 (4%) Query: 187 ENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKV 245 +L++G +VKG V + D G +VD+G +GL+ + +++ + + P EIV G+EI V V Sbjct: 301 ADLKKGQQVKGKVVEIGDNGVYVDVGYKTEGLIPLRELSHRDFEDPHEIVEEGEEIDVIV 360 Query: 246 LKFDRERTRVSLGLKQLG-EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLV 304 L + E + L K+ E W I K Y + VT G V+I G+ G V Sbjct: 361 LTLEDEEGNMVLSKKRADFEKAWERILKAYENDEIIEAEVTREVKGGLVVDI--GLRGFV 418 Query: 305 HVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC----KANPWQQFAET 360 H S + S V G + + V++++ ++ + L K+ + ++ E Sbjct: 419 HASHVAIGY-VEDLSDYV--GKTLRLKVIEVERDKNNVVLSAKKVLEEEREKQKEKTLEE 475 Query: 361 HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL 420 +G V+GK+ I DFG F+ L GGI+GL+H+S++SW E ++G EI VL Sbjct: 476 LQEGQVVKGKVTKIVDFGAFVDL-GGIEGLLHISEMSWGRI-EHPSEVLEEGQEIEVKVL 533 Query: 421 QVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRA 480 V+ E ERISLG+KQL DP+ + + +G +V+G +T + GA +E+ +G+EG + Sbjct: 534 AVNKEEERISLGLKQLLPDPWEEFAKKHYEGEVVSGTITKIVDFGAFMEIENGIEGLIHI 593 Query: 481 SEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEK----DAIATVNK 536 S+ S V+ V+SVG+E++A+ +D + + + LS++A +E E +A Sbjct: 594 SQLSHRHVKTPDEVVSVGEEIKAEIINIDPEQKRVGLSIKALEEQPETPKKVEAPKKEPT 653 Query: 537 QEDANFSNNAMAEA 550 +E+ + S + E Sbjct: 654 RENESTSGVTIGEI 667 Score = 97.3 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 41/168 (24%), Positives = 77/168 (45%), Gaps = 6/168 (3%) Query: 354 WQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGD 413 KG +V+GK+ I D G+++ + +GL+ L ++S E+ ++G+ Sbjct: 296 DDNNPADLKKGQQVKGKVVEIGDNGVYVDVGYKTEGLIPLRELSHRDF-EDPHEIVEEGE 354 Query: 414 EIAAVVLQVDAERERISLGVKQLA-EDPFNNWVALNKKGAIVTGKVTAVDAKGATVELAD 472 EI +VL ++ E + L K+ E + + + I+ +VT G V++ Sbjct: 355 EIDVIVLTLEDEEGNMVLSKKRADFEKAWERILKAYENDEIIEAEVTREVKGGLVVDI-- 412 Query: 473 GVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 G+ G++ AS + VED + VG + K V+R + LS + Sbjct: 413 GLRGFVHASHVAIGYVEDLSDY--VGKTLRLKVIEVERDKNNVVLSAK 458 Score = 63.1 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 42/98 (42%) Query: 442 NNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEV 501 +N A KKG V GKV + G V++ EG + E S ED ++ G+E+ Sbjct: 297 DNNPADLKKGQQVKGKVVEIGDNGVYVDVGYKTEGLIPLRELSHRDFEDPHEIVEEGEEI 356 Query: 502 EAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQED 539 + ++ + + LS + D + I + ++ Sbjct: 357 DVIVLTLEDEEGNMVLSKKRADFEKAWERILKAYENDE 394 >UniRef50_C0QT24 Ribosomal protein S01 n=1 Tax=Persephonella marina EX-H1 RepID=C0QT24_PERMH Length = 550 Score = 348 bits (894), Expect = 2e-94, Method: Composition-based stats. Identities = 160/559 (28%), Positives = 275/559 (49%), Gaps = 23/559 (4%) Query: 4 SFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQ 63 F +L EES G V GV+V I D VD G K+E I + + Sbjct: 7 EFEKLLEESQDIPYYSKGERVTGVIVRIQDDYAFVDVGQKTEVVIDKNEI------NGLS 60 Query: 64 VGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVE 123 GD++ + G ++SR EA +E A+ E + ++ K+ GF V+ Sbjct: 61 EGDQITAVYLGRRNKDGYLVISRRPLIFSEALQRVEDAFSKGEKIGAKLDKKINKGFLVD 120 Query: 124 LNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRN--NVVVSRRAVIESENSAE 181 L G++AFLP S +R + E + ++++D+ R +VVSR+ V++ E + Sbjct: 121 LGGVKAFLPYSESGLRRDEELPPP---EFDVYILRIDRDRKPPGIVVSRKKVLDEEIKRK 177 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVD-GLLHITDMAWKRVKHPSEIVNVGDE 240 RD++ L+EG +V+G V+ + + GA + L + G L + +W R + SE ++VGDE Sbjct: 178 RDEIFSLLEEGKQVRGRVEKVQENGAVLSLERIVFGFLPRSLYSWDRDRSISE-LSVGDE 236 Query: 241 ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV 300 I + V DRE ++ + L DPW K G ++ + ++ D+G V+ + Sbjct: 237 IDLVVKSIDRENQKIIFSKRDLEPDPWKTFDK--EVGDQIEVEIKDINDFGLIVKTGA-L 293 Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAET 360 EG +H SE + G V+ ++++D E RR+ L +K +P +F E Sbjct: 294 EGFIHKSETSHLRPE-NYKNSFRKGQKVKAKIIELDRENRRLKLSIKALHPHPVDKFLEE 352 Query: 361 HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL 420 + +G VEGKIK I + F+ L ++G++HL D +WN + + K VL Sbjct: 353 NPEGSVVEGKIKEIRNKIAFVDLGKDVEGVIHLEDATWNPKIKNIGQVLKGKRLREFKVL 412 Query: 421 QVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRA 480 E++++ LG+KQ ++P+ + + + G ++ KV + +GA V++ + VEG++ Sbjct: 413 G--REKDKVRLGIKQFRDNPWEEFFSKHSVGDVIKAKVKKLIDRGAFVDINEDVEGFIPL 470 Query: 481 SEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVN-KQED 539 SE S++++E + LS+G E+EAK + K I LS++A ++ EK I V K + Sbjct: 471 SEISKEKIEIPSDKLSLGQEIEAKIIKI--KGHDIILSIKALEKDKEKKEIEEVMRKVKP 528 Query: 540 ANFSNNAMAEAFKAA-KGE 557 + E K KGE Sbjct: 529 KGEGLATLGELLKEKLKGE 547 >UniRef50_C5S7U3 RNA binding S1 domain protein n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S7U3_CHRVI Length = 402 Score = 348 bits (893), Expect = 3e-94, Method: Composition-based stats. Identities = 140/396 (35%), Positives = 222/396 (56%), Gaps = 15/396 (3%) Query: 1 MTES--FAQLFEE------SLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQ 52 M+ES F L E ++ E G V G ++AI ++ VD G KSE + Sbjct: 1 MSESASFEDLLNEFDQTHPQAQKGEPAVGDKVSGTLIAIGEEFAFVDLGAKSEGRLDLAV 60 Query: 53 FKNAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVI 112 ++A+G+L+ VGD V+ + ++ G LL + A ++ LE AY V G + Sbjct: 61 IRDAEGQLKYAVGDTVETHVTGKDEESGMLLLGSQHAHKYHGVDELESAYRQGLPVQGQV 120 Query: 113 NGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRN-NVVVSRR 171 G VKGG V++ G+RAF P S +D+R + D G++L+F++ K + R N+VVSRR Sbjct: 121 TGAVKGGCEVQVAGVRAFCPASQIDIRFIEDLSEFVGQKLDFRITKFEGGRRPNLVVSRR 180 Query: 172 AVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHP 231 A++E E + ++L L+EG + G V +L DYGAFVDLGG++G++HI+ +A+ VKHP Sbjct: 181 ALLEEEQRLKAEELRAQLKEGAVLTGTVTSLKDYGAFVDLGGLEGMIHISQLAFGHVKHP 240 Query: 232 SEIVNVGDEITVKVLKFDR-----ERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTN 286 E++ VG I V VL+ + +R +++L ++ L DPW+ +++P GT++ GRV Sbjct: 241 KEVLQVGQPIEVSVLRIEPATDAKKRDKIALSIRALSRDPWLDAIEQFPAGTRVQGRVAR 300 Query: 287 LTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGL 346 L +G F+E+ GV+GLVH+SE+ + HPS V+ GD V V+ +D ERRRISL L Sbjct: 301 LQPFGAFIELAPGVDGLVHISELGAGRRVQHPSDVLKEGDEVTATVIGVDLERRRISLSL 360 Query: 347 KQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIG 382 + + + + K++ FG + Sbjct: 361 DENREVDAAAAVVIATAAKKPAAE-KTMGSFGALLQ 395 Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats. Identities = 101/379 (26%), Positives = 172/379 (45%), Gaps = 24/379 (6%) Query: 191 EGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFD 249 G +V G + + + AFVDLG +G L D+A R VGD + V D Sbjct: 28 VGDKVSGTLIAIGEEFAFVDLGAKSEGRL---DLAVIRDAEGQLKYAVGDTVETHVTGKD 84 Query: 250 RERTRVSLGLKQLGE-DPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSE 308 E + LG + + + Y +G + G+VT GC V++ GV S+ Sbjct: 85 EESGMLLLGSQHAHKYHGVDELESAYRQGLPVQGQVTGAVKGGCEVQVA-GVRAFCPASQ 143 Query: 309 MDWTNKNIHPSKVVNVGDVVEVMVLDIDEERR-RISLGLKQCKANPWQQFAE----THNK 363 +D S+ V G ++ + + RR + + + + AE + Sbjct: 144 ID-IRFIEDLSEFV--GQKLDFRITKFEGGRRPNLVVSRRALLEEEQRLKAEELRAQLKE 200 Query: 364 GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVD 423 G + G + S+ D+G F+ L GG++G++H+S +++ + + G I VL+++ Sbjct: 201 GAVLTGTVTSLKDYGAFVDL-GGLEGMIHISQLAFGHV-KHPKEVLQVGQPIEVSVLRIE 258 Query: 424 A-----ERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYL 478 +R++I+L ++ L+ DP+ + + G V G+V + GA +ELA GV+G + Sbjct: 259 PATDAKKRDKIALSIRALSRDPWLDAIEQFPAGTRVQGRVARLQPFGAFIELAPGVDGLV 318 Query: 479 RASEA-SRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDE--ADEKDAIATVN 535 SE + RV+ + VL GDEV A GVD + R ISLS+ E A IAT Sbjct: 319 HISELGAGRRVQHPSDVLKEGDEVTATVIGVDLERRRISLSLDENREVDAAAAVVIATAA 378 Query: 536 KQEDANFSNNAMAEAFKAA 554 K+ A + + + + Sbjct: 379 KKPAAEKTMGSFGALLQES 397 Score = 194 bits (494), Expect = 7e-48, Method: Composition-based stats. Identities = 95/339 (28%), Positives = 167/339 (49%), Gaps = 26/339 (7%) Query: 119 GFTVELNGIRAFL---PGSL--VDVRPVRD----TLHLEGKELEFKVIKLDQKRNNVVVS 169 G + + AF+ S +D+ +RD + G +E V D++ +++ Sbjct: 34 GTLIAIGEEFAFVDLGAKSEGRLDLAVIRDAEGQLKYAVGDTVETHVTGKDEESGMLLLG 93 Query: 170 RRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVK 229 + + D+L ++G+ V+G V G V + GV + + + ++ Sbjct: 94 SQHAHKYHGV---DELESAYRQGLPVQGQVTGAVKGGCEVQVAGVRAFCPASQIDIRFIE 150 Query: 230 HPSEIVNVGDEITVKVLKFDRERT-RVSLGLKQLGEDPW----VAIAKRYPEGTKLTGRV 284 SE VG ++ ++ KF+ R + + + L E+ + + EG LTG V Sbjct: 151 DLSEF--VGQKLDFRITKFEGGRRPNLVVSRRALLEEEQRLKAEELRAQLKEGAVLTGTV 208 Query: 285 TNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDE-----ER 339 T+L DYG FV++ G+EG++H+S++ + + HP +V+ VG +EV VL I+ +R Sbjct: 209 TSLKDYGAFVDLG-GLEGMIHISQLAFGH-VKHPKEVLQVGQPIEVSVLRIEPATDAKKR 266 Query: 340 RRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWN 399 +I+L ++ +PW E G RV+G++ + FG FI L G+DGLVH+S++ Sbjct: 267 DKIALSIRALSRDPWLDAIEQFPAGTRVQGRVARLQPFGAFIELAPGVDGLVHISELGAG 326 Query: 400 VAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAE 438 + K+GDE+ A V+ VD ER RISL + + E Sbjct: 327 RRVQHPSDVLKEGDEVTATVIGVDLERRRISLSLDENRE 365 >UniRef50_C8WX93 RNA binding S1 domain protein n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WX93_ALIAD Length = 385 Score = 345 bits (886), Expect = 2e-93, Method: Composition-based stats. Identities = 130/353 (36%), Positives = 199/353 (56%), Gaps = 9/353 (2%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL 60 M+E E L + R G +V G V A+D V V E I ++ G Sbjct: 1 MSED----LREMLTDAAVREGDVVTGEVTAVDDHGVTVALPHGYEGHISPQELSAVPGTH 56 Query: 61 E---IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVK 117 + VG V + V+ G LS+ +A++ AW +++ E E + I VK Sbjct: 57 PSDVVSVGSTVTAQVLKVDMESGHVTLSKRRAEQASAWERMQQLLESGEPIEVEIRDVVK 116 Query: 118 GGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESE 177 GG ++ G+RAF+P SLVD V + +G++L KVI++D ++N +++SRRAV+E E Sbjct: 117 GGLVADV-GVRAFIPASLVDRHFVENLEQFKGQKLRAKVIEVDPQKNKLILSRRAVLEEE 175 Query: 178 NSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNV 237 + A +L E L+ G ++G V+ LTD+GAFVD+GG DGL+HI+++++ V HPSE+V Sbjct: 176 SEARARKLFEELKPGDVIEGTVQRLTDFGAFVDVGGADGLVHISELSFSHVNHPSEVVRE 235 Query: 238 GDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE 297 GD + V+VL+ D E R+SL +K +PW A + G + G V + D+G FVE+ Sbjct: 236 GDRVKVRVLRVDPEAGRISLSIKAALPEPWETYAHEFQPGDVVQGVVRRVVDFGAFVELR 295 Query: 298 EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCK 350 G+EGLVHVS++ + + PS V+ G V V VL +D ER+RISL ++ Sbjct: 296 PGLEGLVHVSQISNEHVD-KPSDVLQPGQEVTVRVLSVDPERKRISLSMRDSS 347 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 100/379 (26%), Positives = 177/379 (46%), Gaps = 22/379 (5%) Query: 189 LQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLK 247 ++EG V G V + D+G V L G +G + +++ HPS++V+VG +T +VLK Sbjct: 14 VREGDVVTGEVTAVDDHGVTVALPHGYEGHISPQELSAVPGTHPSDVVSVGSTVTAQVLK 73 Query: 248 FDRERTRVSLGLKQLGE-DPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHV 306 D E V+L ++ + W + + G + + ++ G ++ GV + Sbjct: 74 VDMESGHVTLSKRRAEQASAWERMQQLLESGEPIEVEIRDVVKGGLVADV--GVRAFIPA 131 Query: 307 SEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFA----ETHN 362 S +D + + G + V+++D ++ ++ L + + A E Sbjct: 132 SLVD--RHFVENLEQFK-GQKLRAKVIEVDPQKNKLILSRRAVLEEESEARARKLFEELK 188 Query: 363 KGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQV 422 GD +EG ++ +TDFG F+ + GG DGLVH+S++S++ ++GD + VL+V Sbjct: 189 PGDVIEGTVQRLTDFGAFVDV-GGADGLVHISELSFSHVN-HPSEVVREGDRVKVRVLRV 246 Query: 423 DAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASE 482 D E RISL +K +P+ + + G +V G V V GA VEL G+EG + S+ Sbjct: 247 DPEAGRISLSIKAALPEPWETYAHEFQPGDVVQGVVRRVVDFGAFVELRPGLEGLVHVSQ 306 Query: 483 ASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDE---------ADEKDAIAT 533 S + V+ + VL G EV + VD + + ISLS+R + ++ Sbjct: 307 ISNEHVDKPSDVLQPGQEVTVRVLSVDPERKRISLSMRDSSQPRGGQGRGGRRDRRPTEP 366 Query: 534 VNKQEDANFSNNAMAEAFK 552 N+ + + FK Sbjct: 367 RNEGASGPTLGDLFGDLFK 385 Score = 67.3 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 31/92 (33%), Positives = 50/92 (54%) Query: 446 ALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKF 505 A ++G +VTG+VTAVD G TV L G EG++ E S + V+SVG V A+ Sbjct: 12 AAVREGDVVTGEVTAVDDHGVTVALPHGYEGHISPQELSAVPGTHPSDVVSVGSTVTAQV 71 Query: 506 TGVDRKNRAISLSVRAKDEADEKDAIATVNKQ 537 VD ++ ++LS R ++A + + + + Sbjct: 72 LKVDMESGHVTLSKRRAEQASAWERMQQLLES 103 >UniRef50_B8G2Q3 Hydroxymethylbutenyl pyrophosphate reductase n=2 Tax=Desulfitobacterium hafniense RepID=B8G2Q3_DESHD Length = 661 Score = 344 bits (883), Expect = 5e-93, Method: Composition-based stats. Identities = 131/374 (35%), Positives = 215/374 (57%), Gaps = 5/374 (1%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQF---KNAQG 58 T + + + G++V G VV I+ D V VD G KSE I ++ + Q Sbjct: 279 THEMMNMEDWAEGMQNLHRGALVTGTVVKINHDEVFVDLGWKSEGVIALKELTVASDLQT 338 Query: 59 ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 + +GD++ + VE+ G +LS+ +A A L++ E E + G + VKG Sbjct: 339 SDIVAIGDQISAVVLRVENEEGNPVLSKRRADEMAAVDKLKELAESKEEIQGKVADVVKG 398 Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 G V++ G+R F+P S + V D +G+ L +VI+ D + VV+S++ +++ E Sbjct: 399 GLIVDV-GMRGFVPASQIQPGYVEDLNQFKGQTLRLRVIEFDPAKRRVVLSQKEILQEEQ 457 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVG 238 +A+++ LL LQEG V G+VK L +GAFVD+GGVDGLLH++D+A+ R+KHPSE VNVG Sbjct: 458 AAKKEHLLATLQEGDVVSGVVKRLAQFGAFVDIGGVDGLLHVSDIAYTRIKHPSEYVNVG 517 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE 298 DE+ V++LK D+E+ ++SLGLKQL PW + ++Y G+ +TG+V + +G FV++E+ Sbjct: 518 DEVEVQILKVDKEQGKISLGLKQLKPSPWESAPEKYALGSLVTGKVVRIAPFGAFVQLED 577 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFA 358 G++ L+H+S++ N VV VGD+V+ V++ E +RISL +++ A Sbjct: 578 GIDALIHISQLSEKRVN-KVEDVVKVGDMVQAKVIECKPEEKRISLSIREAAAEAQATED 636 Query: 359 ETHNKGDRVEGKIK 372 ++ Sbjct: 637 AELLASQPEAPQVT 650 Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats. Identities = 103/364 (28%), Positives = 179/364 (49%), Gaps = 13/364 (3%) Query: 163 RNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHIT 221 R + + E N + + ++NL G V G V + FVDLG +G++ + Sbjct: 269 RKMSTMENKETHEMMNMEDWAEGMQNLHRGALVTGTVVKINHDEVFVDLGWKSEGVIALK 328 Query: 222 DMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGE-DPWVAIAKRYPEGTKL 280 ++ S+IV +GD+I+ VL+ + E L ++ E + + ++ Sbjct: 329 ELTVASDLQTSDIVAIGDQISAVVLRVENEEGNPVLSKRRADEMAAVDKLKELAESKEEI 388 Query: 281 TGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERR 340 G+V ++ G V++ G+ G V S++ ++ G + + V++ D +R Sbjct: 389 QGKVADVVKGGLIVDV--GMRGFVPASQIQPGY-VEDLNQF--KGQTLRLRVIEFDPAKR 443 Query: 341 RISLGLKQC----KANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDI 396 R+ L K+ +A + T +GD V G +K + FG F+ + GG+DGL+H+SDI Sbjct: 444 RVVLSQKEILQEEQAAKKEHLLATLQEGDVVSGVVKRLAQFGAFVDI-GGVDGLLHVSDI 502 Query: 397 SWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTG 456 ++ + GDE+ +L+VD E+ +ISLG+KQL P+ + G++VTG Sbjct: 503 AYTRI-KHPSEYVNVGDEVEVQILKVDKEQGKISLGLKQLKPSPWESAPEKYALGSLVTG 561 Query: 457 KVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAIS 516 KV + GA V+L DG++ + S+ S RV V+ VGD V+AK + + IS Sbjct: 562 KVVRIAPFGAFVQLEDGIDALIHISQLSEKRVNKVEDVVKVGDMVQAKVIECKPEEKRIS 621 Query: 517 LSVR 520 LS+R Sbjct: 622 LSIR 625 Score = 56.5 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 45/106 (42%) Query: 441 FNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDE 500 + + +GA+VTG V ++ V+L EG + E + + ++++GD+ Sbjct: 288 WAEGMQNLHRGALVTGTVVKINHDEVFVDLGWKSEGVIALKELTVASDLQTSDIVAIGDQ 347 Query: 501 VEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNA 546 + A V+ + LS R DE D + + + ++ A Sbjct: 348 ISAVVLRVENEEGNPVLSKRRADEMAAVDKLKELAESKEEIQGKVA 393 >UniRef50_A9BGS2 RNA binding S1 domain protein n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BGS2_PETMO Length = 532 Score = 339 bits (869), Expect = 2e-91, Method: Composition-based stats. Identities = 156/517 (30%), Positives = 269/517 (52%), Gaps = 23/517 (4%) Query: 1 MTES--FAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQG 58 M E F +L E E + G I+ G V I+ D + V + + Q + + Sbjct: 1 MMEEKTFEKLLNEQEIN-EVKKGKIIEGKVFEINSDGIWVAL-EGATGDVFVSQVELIKP 58 Query: 59 ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 E QV ++ V + D G S ++A W + E + ++K Sbjct: 59 LQEYQVDQKILVEITKTNDAEGLNFASEKRA----VWNETMNKINEGENYPIIFKNRLKK 114 Query: 119 GFTVELNGIR-AFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESE 177 G++V + G+ AFLPGSL + P D G+++ KVI + K V I+ Sbjct: 115 GYSVLIEGLIGAFLPGSLSLLSPKDDLPQ--GEKM-AKVISKNGKNIVV------SIKDY 165 Query: 178 NSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVN 236 + Q +EGM + G+V+++ ++GAFV L ++GL+ ++++W + + Sbjct: 166 AEEKISQTFNEYEEGMVIDGVVEDIKNFGAFVRLNDHLNGLIPASEVSWDEKISIKDYLK 225 Query: 237 VGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI 296 VG ++ ++K DRE+ R+SL LK+L E+PW + ++YP G+ + G VT + +G V+I Sbjct: 226 VGQKVKALIIKLDREKKRISLSLKRLKENPWKTVDEKYPIGSIVQGTVTKILPFGFTVKI 285 Query: 297 EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQ 356 +EG+EGLVH +E+ W K S +VNVGD V+V +L+ID+E ++I+L KQ +PW+ Sbjct: 286 DEGLEGLVHETEIFWGRKG-RISDLVNVGDDVQVKILNIDKENKKINLSYKQVSGDPWEN 344 Query: 357 FAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIA 416 E + +G+ V G ++ + D G I +D GI G +H+S++SW+ ++ + +I Sbjct: 345 IEEKYYEGNIVTGTVEKVLDNGAIIKIDEGITGFLHVSELSWDFV-DDISTVLNEKQKIK 403 Query: 417 AVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELAD-GVE 475 ++++D + +R+ L V++ E+P+ K G V GK+ KGA V + VE Sbjct: 404 VKIIKIDKDNKRMRLSVRETKENPWKKASKEIKPGDTVKGKIIRFLDKGAIVLIDGYEVE 463 Query: 476 GYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKN 512 YL AS+AS + + S+GD++EAK + +N Sbjct: 464 AYLPASKASTN-SKSLEETYSIGDQIEAKVLEIGLEN 499 Score = 204 bits (520), Expect = 6e-51, Method: Composition-based stats. Identities = 102/358 (28%), Positives = 184/358 (51%), Gaps = 13/358 (3%) Query: 75 VEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNG-IRAFLPG 133 + ++S + + T + YE+ + GV+ G V LN + +P Sbjct: 151 ISKNGKNIVVSIKDYAEEKISQTFNE-YEEGMVIDGVVEDIKNFGAFVRLNDHLNGLIPA 209 Query: 134 SLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQE 191 S V G++++ +IKLD+++ + +S + + E+ ++ Sbjct: 210 SEVSWDEKISIKDYLKVGQKVKALIIKLDREKKRISLSLKRLKENPWKTVDEKY----PI 265 Query: 192 GMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDR 250 G V+G V + +G V + G++GL+H T++ W R S++VNVGD++ VK+L D+ Sbjct: 266 GSIVQGTVTKILPFGFTVKIDEGLEGLVHETEIFWGRKGRISDLVNVGDDVQVKILNIDK 325 Query: 251 ERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMD 310 E +++L KQ+ DPW I ++Y EG +TG V + D G ++I+EG+ G +HVSE+ Sbjct: 326 ENKKINLSYKQVSGDPWENIEEKYYEGNIVTGTVEKVLDNGAIIKIDEGITGFLHVSELS 385 Query: 311 WTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGK 370 W + S V+N ++V ++ ID++ +R+ L +++ K NPW++ ++ GD V+GK Sbjct: 386 W-DFVDDISTVLNEKQKIKVKIIKIDKDNKRMRLSVRETKENPWKKASKEIKPGDTVKGK 444 Query: 371 IKSITDFGIFIGLDG-GIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERE 427 I D G + +DG ++ + S S N + Y GD+I A VL++ E E Sbjct: 445 IIRFLDKGAIVLIDGYEVEAYLPASKASTN--SKSLEETYSIGDQIEAKVLEIGLENE 500 >UniRef50_B9L032 30S ribosomal protein S1 n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L032_THERP Length = 443 Score = 337 bits (865), Expect = 6e-91, Method: Composition-based stats. Identities = 130/390 (33%), Positives = 224/390 (57%), Gaps = 14/390 (3%) Query: 2 TESFAQLFEE-SLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL 60 E F +L ++ S R G +V G V+ +D++ +LVD G K E +P+ +F+ E Sbjct: 25 AEIFRRLLDDPSYDYRLFRYGDVVEGEVMHVDREKILVDIGGKCEGVVPSREFQTLSPEE 84 Query: 61 E--IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 ++ GD V V + ED G+ +LS ++A++ + W L++ +E + + KG Sbjct: 85 LGRLRPGDRVLVFVLQPEDQAGQAILSIDRARQEKTWRRLQEVFEAGGVIEAEVVNYNKG 144 Query: 119 GFTVELNGIRAFLPGSLV-------DVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRR 171 G V L+GIR F+P S V +V D + G+ L+ K+I++++ RN +++S R Sbjct: 145 GLLVNLDGIRGFVPASQVVAIRGGDEVSKQADMARMVGQRLKLKIIEINRHRNRLILSER 204 Query: 172 AVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHP 231 ++ + A + QL+E L+EG +G V ++ D+G FVD+GG DGL+H+++++W RVKHP Sbjct: 205 QAVQEQRDAMKAQLIETLREGETRRGRVTSIADFGVFVDIGGADGLVHLSEISWTRVKHP 264 Query: 232 SEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYG 291 SE++ VGDE+ V VL + E+ +++L +++ +PW+ +A ++ G + G +T L +G Sbjct: 265 SEVLRVGDEVDVMVLSVNPEQRKIALSIRRTQPEPWMQVASQFQVGQVVRGTITQLASFG 324 Query: 292 CFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKA 351 F ++EGVEGL+HVSE+ + HP++V+ GD V V V+ ID RRRI L L++ Sbjct: 325 AFARLQEGVEGLIHVSELAG-WRVEHPNEVLQEGDDVIVRVIRIDPARRRIGLSLRRALE 383 Query: 352 NPWQQFAETHNKGDRVEGK---IKSITDFG 378 ++ T + + IT +G Sbjct: 384 ISDEELEATLGPEAVAIKQQLIARGITPYG 413 Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats. Identities = 94/359 (26%), Positives = 174/359 (48%), Gaps = 14/359 (3%) Query: 189 LQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLK 247 + G V+G V ++ VD+GG +G++ + + + GD + V VL+ Sbjct: 42 FRYGDVVEGEVMHVDREKILVDIGGKCEGVVPSREFQTLSPEELGR-LRPGDRVLVFVLQ 100 Query: 248 FDRERTRVSLGL-KQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHV 306 + + + L + + E W + + + G + V N G V + +G+ G V Sbjct: 101 PEDQAGQAILSIDRARQEKTWRRLQEVFEAGGVIEAEVVNYNKGGLLVNL-DGIRGFVPA 159 Query: 307 SE---MDWTNKNIHPSKVVNV-GDVVEVMVLDIDEERRRISLGLKQCKANPWQQFA---- 358 S+ + ++ + + + G +++ +++I+ R R+ L +Q Sbjct: 160 SQVVAIRGGDEVSKQADMARMVGQRLKLKIIEINRHRNRLILSERQAVQEQRDAMKAQLI 219 Query: 359 ETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAV 418 ET +G+ G++ SI DFG+F+ + GG DGLVHLS+ISW + + GDE+ + Sbjct: 220 ETLREGETRRGRVTSIADFGVFVDI-GGADGLVHLSEISWTRV-KHPSEVLRVGDEVDVM 277 Query: 419 VLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYL 478 VL V+ E+ +I+L +++ +P+ + + G +V G +T + + GA L +GVEG + Sbjct: 278 VLSVNPEQRKIALSIRRTQPEPWMQVASQFQVGQVVRGTITQLASFGAFARLQEGVEGLI 337 Query: 479 RASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQ 537 SE + RVE VL GD+V + +D R I LS+R E +++ AT+ + Sbjct: 338 HVSELAGWRVEHPNEVLQEGDDVIVRVIRIDPARRRIGLSLRRALEISDEELEATLGPE 396 >UniRef50_D1C7V0 RNA binding S1 domain protein n=2 Tax=Chloroflexi RepID=D1C7V0_SPHTD Length = 459 Score = 337 bits (864), Expect = 8e-91, Method: Composition-based stats. Identities = 128/369 (34%), Positives = 212/369 (57%), Gaps = 11/369 (2%) Query: 5 FAQLFEE-SLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL--E 61 QL + S G ++ G ++ +D+D +LVD G KSE IPA +F E Sbjct: 31 MEQLLSDPSHDYRVLNYGDVIEGQIMHVDRDELLVDIGSKSEGIIPAREFSTLTDEERAA 90 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 + VGD V V + E+ G+ +LS ++A++ ++W L++ YE E + + KGG Sbjct: 91 LSVGDHVLVFVVQAENQEGQAVLSIDRARQEKSWRRLQEIYEAGEIIEAEVTNYNKGGLL 150 Query: 122 VELNGIRAFLPGSLV-------DVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVI 174 V L+G+R F+P S V D D L G +L K+I++++ RN +++S R I Sbjct: 151 VNLDGVRGFVPASQVTEIRGGDDSSKQADMARLIGSKLSLKIIEINRHRNRLILSERQAI 210 Query: 175 ESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEI 234 + +++L+E L EG +G V ++TD+GAFVD+GG DGL+H+++++W RVKHPSE+ Sbjct: 211 QERRDVMKERLIEELTEGETRRGRVTSITDFGAFVDIGGADGLVHLSELSWSRVKHPSEV 270 Query: 235 VNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFV 294 + VG+E+ V VL + E +++L +K+ +PW +A +Y G + G VT L ++G F Sbjct: 271 LKVGEEVDVYVLGINAEEKKIALSIKRTQPEPWSRVAMKYEVGQLVLGTVTQLANFGAFA 330 Query: 295 EIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPW 354 IE+G+EGL+HVSE+ + HP +VV+ G + + ++ ID RRR+ L L++ Sbjct: 331 RIEDGIEGLIHVSELS-EQRIGHPRQVVSEGQDLILRIIRIDPARRRMGLSLRRALEATD 389 Query: 355 QQFAETHNK 363 + A + Sbjct: 390 DEVAASLGP 398 Score = 244 bits (624), Expect = 6e-63, Method: Composition-based stats. Identities = 93/359 (25%), Positives = 172/359 (47%), Gaps = 14/359 (3%) Query: 189 LQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSEIVNVGDEITVKVLK 247 L G ++G + ++ VD+G +G++ + + ++VGD + V V++ Sbjct: 45 LNYGDVIEGQIMHVDRDELLVDIGSKSEGIIPAREFS-TLTDEERAALSVGDHVLVFVVQ 103 Query: 248 FDRERTRVSLGL-KQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHV 306 + + + L + + E W + + Y G + VTN G V + +GV G V Sbjct: 104 AENQEGQAVLSIDRARQEKSWRRLQEIYEAGEIIEAEVTNYNKGGLLVNL-DGVRGFVPA 162 Query: 307 SEMDWTNKNIHPSKVVNV----GDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETH- 361 S++ SK ++ G + + +++I+ R R+ L +Q E Sbjct: 163 SQVTEIRGGDDSSKQADMARLIGSKLSLKIIEINRHRNRLILSERQAIQERRDVMKERLI 222 Query: 362 ---NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAV 418 +G+ G++ SITDFG F+ + GG DGLVHLS++SW+ + K G+E+ Sbjct: 223 EELTEGETRRGRVTSITDFGAFVDI-GGADGLVHLSELSWSRV-KHPSEVLKVGEEVDVY 280 Query: 419 VLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYL 478 VL ++AE ++I+L +K+ +P++ + G +V G VT + GA + DG+EG + Sbjct: 281 VLGINAEEKKIALSIKRTQPEPWSRVAMKYEVGQLVLGTVTQLANFGAFARIEDGIEGLI 340 Query: 479 RASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQ 537 SE S R+ V+S G ++ + +D R + LS+R EA + + A++ + Sbjct: 341 HVSELSEQRIGHPRQVVSEGQDLILRIIRIDPARRRMGLSLRRALEATDDEVAASLGPE 399 Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 38/201 (18%), Positives = 81/201 (40%), Gaps = 9/201 (4%) Query: 343 SLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAG 402 S+ L + + N GD +EG+I + + + + +G++ + S Sbjct: 27 SVSLMEQLLSDPSHDYRVLNYGDVIEGQIMHVDRDELLVDIGSKSEGIIPAREFS--TLT 84 Query: 403 EEAVREYKKGDEIAAVVLQVDAERERISLGV-KQLAEDPFNNWVALNKKGAIVTGKVTAV 461 +E GD + V+Q + + + L + + E + + + G I+ +VT Sbjct: 85 DEERAALSVGDHVLVFVVQAENQEGQAVLSIDRARQEKSWRRLQEIYEAGEIIEAEVTNY 144 Query: 462 DAKGATVELADGVEGYLRASEASRDRVEDATLVLS-----VGDEVEAKFTGVDRKNRAIS 516 + G V L DGV G++ AS+ + R D + + +G ++ K ++R + Sbjct: 145 NKGGLLVNL-DGVRGFVPASQVTEIRGGDDSSKQADMARLIGSKLSLKIIEINRHRNRLI 203 Query: 517 LSVRAKDEADEKDAIATVNKQ 537 LS R + + ++ Sbjct: 204 LSERQAIQERRDVMKERLIEE 224 >UniRef50_A6TRF8 RNA binding S1 domain protein n=2 Tax=Alkaliphilus RepID=A6TRF8_ALKMQ Length = 383 Score = 336 bits (862), Expect = 1e-90, Method: Composition-based stats. Identities = 130/369 (35%), Positives = 214/369 (57%), Gaps = 5/369 (1%) Query: 1 MTESFAQLFEESLKE-IETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ-- 57 M+ +L EE K I + G +V G V+ + + V+ G K++ +P ++ N Sbjct: 1 MSHDMEELMEEIEKSLIRPKRGEVVTGKVIQVSDKGITVNIGYKADGIVPRDEISNDPTI 60 Query: 58 -GELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKV 116 + + DE+ V + +DG G LLS ++ + + W LEK ++ V + V Sbjct: 61 TPQDVAKADDEISVYIIKTDDGEGNVLLSTKRVEHTKGWEDLEKIHDTESLVESKVVESV 120 Query: 117 KGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIES 176 KGG GIR F+P S + R V D GK KVI++D+++N V+SR+ V++ Sbjct: 121 KGGVIAIARGIRCFIPASQLSDRYVDDLKTFVGKSFNAKVIEIDRQKNKAVLSRKEVLQQ 180 Query: 177 ENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVN 236 EN ++ + L++GM+++G VK LT++GAFVD+GG+DGL+HI++++W RVK+PSE+V+ Sbjct: 181 ENKEKKADVFAKLEKGMQIRGEVKRLTNFGAFVDIGGIDGLVHISELSWGRVKNPSEVVS 240 Query: 237 VGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI 296 V D++ VKV+ FD +VSL +KQ +PW IA ++ G L G+V L D+G FVE+ Sbjct: 241 VEDQVEVKVIDFDETTGKVSLSIKQTQPEPWTLIADKFKAGDILEGKVVRLVDFGAFVEL 300 Query: 297 EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQ 356 G++GLVH+S++ + PS+ ++VG V V VLDI+ + +RISL + + + + Sbjct: 301 MPGLDGLVHISQISEAH-IAKPSEELHVGQNVNVKVLDINIDGKRISLSMTAAQEDSTEN 359 Query: 357 FAETHNKGD 365 + D Sbjct: 360 EPTEYTDED 368 Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 91/378 (24%), Positives = 170/378 (44%), Gaps = 12/378 (3%) Query: 176 SENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEI 234 E E ++ L + G V G V ++D G V++G DG++ +++ P ++ Sbjct: 6 EELMEEIEKSLIRPKRGEVVTGKVIQVSDKGITVNIGYKADGIVPRDEISNDPTITPQDV 65 Query: 235 VNVGDEITVKVLKFDRERTRVSLGLKQLG-EDPWVAIAKRYPEGTKLTGRVTNLTDYGCF 293 DEI+V ++K D V L K++ W + K + + + +V G Sbjct: 66 AKADDEISVYIIKTDDGEGNVLLSTKRVEHTKGWEDLEKIHDTESLVESKVVESVKGGV- 124 Query: 294 VEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP 353 + I G+ + S++ ++ + K VG V++ID ++ + L K+ Sbjct: 125 IAIARGIRCFIPASQLS--DRYVDDLKTF-VGKSFNAKVIEIDRQKNKAVLSRKEVLQQE 181 Query: 354 WQQFAE----THNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREY 409 ++ KG ++ G++K +T+FG F+ + GGIDGLVH+S++SW + Sbjct: 182 NKEKKADVFAKLEKGMQIRGEVKRLTNFGAFVDI-GGIDGLVHISELSWGRV-KNPSEVV 239 Query: 410 KKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVE 469 D++ V+ D ++SL +KQ +P+ K G I+ GKV + GA VE Sbjct: 240 SVEDQVEVKVIDFDETTGKVSLSIKQTQPEPWTLIADKFKAGDILEGKVVRLVDFGAFVE 299 Query: 470 LADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKD 529 L G++G + S+ S + + L VG V K ++ + ISLS+ A E ++ Sbjct: 300 LMPGLDGLVHISQISEAHIAKPSEELHVGQNVNVKVLDINIDGKRISLSMTAAQEDSTEN 359 Query: 530 AIATVNKQEDANFSNNAM 547 +++ + + Sbjct: 360 EPTEYTDEDNNVTIGDII 377 >UniRef50_A6DP56 30S ribosomal protein S1 n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DP56_9BACT Length = 463 Score = 335 bits (860), Expect = 2e-90, Method: Composition-based stats. Identities = 149/436 (34%), Positives = 241/436 (55%), Gaps = 27/436 (6%) Query: 3 ESFAQLFEESLKE--IETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL 60 E FA LFEE+ + IE + G V+G + IDK + VD G + E IP + + +GEL Sbjct: 12 EDFASLFEENSRSMKIEFKSGEAVKGKITLIDKSSIFVDFGARCEGIIPLGEVLDNKGEL 71 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 E++VGDE++ + D GE L+ K T E AY + V G + + KGG+ Sbjct: 72 ELKVGDEIEAWVL--NDRGGEISLTV-KLSGDALNETFEAAYSEKIPVEGKVIEERKGGY 128 Query: 121 TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 TV L+G AF P S +D RP D G+ F + K+D VVSRR ++ Sbjct: 129 TVNLSGNMAFCPYSQMDSRPG-DASLYLGQTFSFLITKID--DRGAVVSRRDYLKILAEK 185 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 +R++L E L EG E++G+++ + +G FVDLGGVDGL+ ++++WKR +E V+VGD+ Sbjct: 186 QREKLQEELVEGDEIEGVIRRIERFGFFVDLGGVDGLVPASEVSWKRNVDLNEFVSVGDQ 245 Query: 241 ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV 300 ++ K+L D E+ R++L L+ +DPW + G +V+++ D+G FVE+ EGV Sbjct: 246 VSCKILALDWEKGRITLSLRACLQDPWDS--DELFNGATFEAKVSSVQDFGAFVELIEGV 303 Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAET 360 +GL+H+S+ K I P +G+ ++V + +D ++ RISL L + + + E Sbjct: 304 DGLLHISQ----FKGIQP----QIGETLKVKIDSVDFDQHRISLSLHKGEVGEAVEIVEA 355 Query: 361 HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEE---AVREYKKGDEIAA 417 + G +++I +G+F+GL G GL+H+S + +G+ + Y KG E Sbjct: 356 ----KELTGTVENIKPYGVFMGLSDGRSGLLHVSQLDVPKSGDATKTLEKNYAKGSEHKI 411 Query: 418 VVLQVDAERERISLGV 433 +L+V E +ISL + Sbjct: 412 EILKV--EAGKISLCL 425 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 109/459 (23%), Positives = 194/459 (42%), Gaps = 38/459 (8%) Query: 102 YEDAETVTGVINGKVKGGFTVELNG-IRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLD 160 ++ E V G I K V+ +P V + + G E+E V+ + Sbjct: 29 FKSGEAVKGKITLIDKSSIFVDFGARCEGIIPLGEV-LDNKGELELKVGDEIEAWVL--N 85 Query: 161 QKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHI 220 + + ++ + ++ N E + V+G V G V+L G Sbjct: 86 DRGGEISLTVKLSGDALNETFEAAYSEKIP----VEGKVIEERKGGYTVNLSGNMAFCPY 141 Query: 221 TDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLG--LKQLGEDPWVAIAKRYPEGT 278 + M R S + +G + + K D VS LK L E + + EG Sbjct: 142 SQM-DSRPGDAS--LYLGQTFSFLITKIDDRGAVVSRRDYLKILAEKQREKLQEELVEGD 198 Query: 279 KLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEE 338 ++ G + + +G FV++ GV+GLV SE+ W +N+ ++ V+VGD V +L +D E Sbjct: 199 EIEGVIRRIERFGFFVDLG-GVDGLVPASEVSW-KRNVDLNEFVSVGDQVSCKILALDWE 256 Query: 339 RRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISW 398 + RI+L L+ C +PW ++ G E K+ S+ DFG F+ L G+DGL+H+S Sbjct: 257 KGRITLSLRACLQDPWD--SDELFNGATFEAKVSSVQDFGAFVELIEGVDGLLHISQFK- 313 Query: 399 NVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKV 458 + + G+ + + VD ++ RISL L + V + + +TG V Sbjct: 314 -------GIQPQIGETLKVKIDSVDFDQHRISLS---LHKGEVGEAVEIV-EAKELTGTV 362 Query: 459 TAVDAKGATVELADGVEGYLRASEA----SRDRVEDATLVLSVGDEVEAKFTGVDRKNRA 514 + G + L+DG G L S+ S D + + G E + + V + Sbjct: 363 ENIKPYGVFMGLSDGRSGLLHVSQLDVPKSGDATKTLEKNYAKGSEHKIEILKV--EAGK 420 Query: 515 ISLSV--RAKDEADEKDAIATVNKQEDANFSNNAMAEAF 551 ISL + +A + + ++K+ ++ S ++ F Sbjct: 421 ISLCLPGKAAAAENTSKLLNDLHKKSNSG-SFGSLGGMF 458 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 89/350 (25%), Positives = 152/350 (43%), Gaps = 26/350 (7%) Query: 188 NLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVL 246 + G VKG + + FVD G +G++ + ++ + VGDEI VL Sbjct: 28 EFKSGEAVKGKITLIDKSSIFVDFGARCEGIIPLGEVLD---NKGELELKVGDEIEAWVL 84 Query: 247 KFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHV 306 + +SL +K G+ Y E + G+V G V + + Sbjct: 85 --NDRGGEISLTVKLSGDALNETFEAAYSEKIPVEGKVIEERKGGYTVNLSGNM-AFCPY 141 Query: 307 SEMDWTNKNIHPSKV-VNVGDVVEVMVLDIDEERRRISLG--LKQCKANPWQQFAETHNK 363 S+MD P + +G ++ ID+ +S LK ++ E + Sbjct: 142 SQMD-----SRPGDASLYLGQTFSFLITKIDDRGAVVSRRDYLKILAEKQREKLQEELVE 196 Query: 364 GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVD 423 GD +EG I+ I FG F+ L GG+DGLV S++SW + GD+++ +L +D Sbjct: 197 GDEIEGVIRRIERFGFFVDL-GGVDGLVPASEVSWKR-NVDLNEFVSVGDQVSCKILALD 254 Query: 424 AERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEA 483 E+ RI+L ++ +DP+++ GA KV++V GA VEL +GV+G L S+ Sbjct: 255 WEKGRITLSLRACLQDPWDS--DELFNGATFEAKVSSVQDFGAFVELIEGVDGLLHISQF 312 Query: 484 SRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIAT 533 + +G+ ++ K VD ISLS+ + + + + Sbjct: 313 K-------GIQPQIGETLKVKIDSVDFDQHRISLSLHKGEVGEAVEIVEA 355 Score = 124 bits (312), Expect = 8e-27, Method: Composition-based stats. Identities = 62/269 (23%), Positives = 111/269 (41%), Gaps = 14/269 (5%) Query: 262 LGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKV 321 L E+ ++ + G + G++T + FV+ EG++ + E+ + Sbjct: 17 LFEENSRSMKIEFKSGEAVKGKITLIDKSSIFVDFGARCEGIIPLGEVLDNKGELE---- 72 Query: 322 VNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFI 381 + VGD +E VL ++ ISL +K + F +++ VEGK+ G + Sbjct: 73 LKVGDEIEAWVL--NDRGGEISLTVKLSGDALNETFEAAYSEKIPVEGKVIEERKGGYTV 130 Query: 382 GLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLG--VKQLAED 439 L G + S + G + ++ ++D +S +K LAE Sbjct: 131 NLSGNM-AFCPYSQMD----SRPGDASLYLGQTFSFLITKIDDRGAVVSRRDYLKILAEK 185 Query: 440 PFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGD 499 +G + G + ++ G V+L GV+G + ASE S R D +SVGD Sbjct: 186 QREKLQEELVEGDEIEGVIRRIERFGFFVDLG-GVDGLVPASEVSWKRNVDLNEFVSVGD 244 Query: 500 EVEAKFTGVDRKNRAISLSVRAKDEADEK 528 +V K +D + I+LS+RA + Sbjct: 245 QVSCKILALDWEKGRITLSLRACLQDPWD 273 >UniRef50_A6CB07 30S ribosomal protein S1 n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CB07_9PLAN Length = 572 Score = 335 bits (860), Expect = 2e-90, Method: Composition-based stats. Identities = 135/349 (38%), Positives = 201/349 (57%), Gaps = 14/349 (4%) Query: 15 EIETRPGSIVRGVVVAIDKDVVLVDAGLKS---ESAIPAEQFKNAQGELEIQVGDEVDVA 71 E G ++GVV +I+ D V +D G K+ +P QF GE +G EVDV Sbjct: 193 EEGVGEGDRLKGVVESINNDDVFIDLGAKAMGVPGIVPLRQF----GEKTPVIGQEVDVK 248 Query: 72 LDAVEDGFGETLLSREKAKRHEA--WITLEKAYEDAETVTGVINGKVKGGFTVELNGIRA 129 + +V++ G LS + A W A + V V+N KGG V + +R Sbjct: 249 VTSVKEAEGLIQLSLPRGHHKPAGDWD----AVSAGQVVECVVNKSNKGGLEVNVGSLRG 304 Query: 130 FLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENL 189 FLP S VD+ V D G++L ++ +++ K+ N+VVSRR +ESE + +L E L Sbjct: 305 FLPASQVDLYFVGDLEPFVGQKLTVQITEVNPKKRNLVVSRRKYLESEREEIQKELWEKL 364 Query: 190 QEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFD 249 G E G VKN+ DYGAFVDLGG+DG LHI +++W R+KHP + ++ +I VK+LK D Sbjct: 365 AIGQEHTGTVKNIKDYGAFVDLGGIDGFLHIGEISWNRIKHPKDALSEHQQINVKILKID 424 Query: 250 RERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEM 309 +E+ R+SLG+KQL +DPW + RY G+ ++G+VT TD+G F+E+E G+EGL+H+SE+ Sbjct: 425 KEKNRISLGMKQLQQDPWQSAEDRYATGSTISGKVTRTTDFGAFIELEPGLEGLIHISEL 484 Query: 310 DWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFA 358 D + ++V+ G VL++D R+RISL +K P A Sbjct: 485 DH-RRVKRVTEVLTTGQETSAKVLEVDPNRKRISLSIKALIDKPEAAEA 532 Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 102/362 (28%), Positives = 170/362 (46%), Gaps = 25/362 (6%) Query: 187 ENLQEGMEVKGIVKNLTDYGAFVDLG----GVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 E + EG +KG+V+++ + F+DLG GV G++ + K +G E+ Sbjct: 194 EGVGEGDRLKGVVESINNDDVFIDLGAKAMGVPGIVPLRQFGEKTPV-------IGQEVD 246 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 VKV + L L + P G + V G V + + G Sbjct: 247 VKVTSVKEAEGLIQLSLPRGHHKP-AGDWDAVSAGQVVECVVNKSNKGGLEVNVG-SLRG 304 Query: 303 LVHVSEMD-WTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQ----CKANPWQQF 357 + S++D + ++ P VG + V + +++ ++R + + ++ + ++ Sbjct: 305 FLPASQVDLYFVGDLEPF----VGQKLTVQITEVNPKKRNLVVSRRKYLESEREEIQKEL 360 Query: 358 AETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAA 417 E G G +K+I D+G F+ L GGIDG +H+ +ISWN + + +I Sbjct: 361 WEKLAIGQEHTGTVKNIKDYGAFVDL-GGIDGFLHIGEISWNRI-KHPKDALSEHQQINV 418 Query: 418 VVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGY 477 +L++D E+ RISLG+KQL +DP+ + G+ ++GKVT GA +EL G+EG Sbjct: 419 KILKIDKEKNRISLGMKQLQQDPWQSAEDRYATGSTISGKVTRTTDFGAFIELEPGLEGL 478 Query: 478 LRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQ 537 + SE RV+ T VL+ G E AK VD + ISLS++A + E A A V Q Sbjct: 479 IHISELDHRRVKRVTEVLTTGQETSAKVLEVDPNRKRISLSIKALIDKPE-AAEAPVEDQ 537 Query: 538 ED 539 Sbjct: 538 PS 539 Score = 78.8 bits (193), Expect = 5e-13, Method: Composition-based stats. Identities = 42/180 (23%), Positives = 72/180 (40%), Gaps = 15/180 (8%) Query: 358 AETHNKGDRVEGKIKSITDFGIFIGLDG---GIDGLVHLSDISWNVAGEEAVREYKKGDE 414 E +GDR++G ++SI + +FI L G+ G+V L G E Sbjct: 193 EEGVGEGDRLKGVVESINNDDVFIDLGAKAMGVPGIVPLRQFGEKTPV--------IGQE 244 Query: 415 IAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGV 474 + V V I L + + P +W G +V V + G V + + Sbjct: 245 VDVKVTSVKEAEGLIQLSLPRGHHKPAGDW-DAVSAGQVVECVVNKSNKGGLEVNVG-SL 302 Query: 475 EGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATV 534 G+L AS+ V D VG ++ + T V+ K R + +S R E++ ++ + Sbjct: 303 RGFLPASQVDLYFVGDLEPF--VGQKLTVQITEVNPKKRNLVVSRRKYLESEREEIQKEL 360 Score = 41.9 bits (97), Expect = 0.070, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 35/100 (35%), Gaps = 12/100 (12%) Query: 444 WVALNKKGAIVTGKVTAVDAKGATVELA---DGVEGYLRASEASRDRVEDATLVLSVGDE 500 +G + G V +++ ++L GV G + + +G E Sbjct: 192 AEEGVGEGDRLKGVVESINNDDVFIDLGAKAMGVPGIVPLRQFGEKTPV-------IGQE 244 Query: 501 VEAKFTGVDRKNRAISLSVRA--KDEADEKDAIATVNKQE 538 V+ K T V I LS+ A + DA++ E Sbjct: 245 VDVKVTSVKEAEGLIQLSLPRGHHKPAGDWDAVSAGQVVE 284 >UniRef50_C7RHT6 Hydroxymethylbutenyl pyrophosphate reductase n=8 Tax=Clostridiales Family XI. Incertae Sedis RepID=C7RHT6_ANAPD Length = 686 Score = 335 bits (860), Expect = 2e-90, Method: Composition-based stats. Identities = 145/358 (40%), Positives = 221/358 (61%), Gaps = 10/358 (2%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ---G 58 E F E+SLK+I + IV+G V+ + D V VD +++ I ++ + Sbjct: 279 KEEFMNSLEDSLKKIYPK--EIVKGTVIDVKDDEVFVDIQFRADGIIKLDEMTEEEAKDP 336 Query: 59 ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 + VGDE+DV + ++DG G LS + + + W L + E+ E V GV++G KG Sbjct: 337 KNSFNVGDEIDVFVIKLDDGEGNVSLSTRRVEGMKVWKDLAEKAENDELVHGVVSGFNKG 396 Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 G TV + GI F+P S + V++ G+E + K+I +D+++N +V+SR+ V+E E Sbjct: 397 GLTVNVEGINGFVPASQIATYFVKNFKKFVGEEWDLKIISIDERKNRLVLSRKEVVEDE- 455 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVG 238 D L E L+EG V G V LTD+GAFV++ G+DGLLH++D+AW RV+HPS+++NVG Sbjct: 456 ---LDGLWEELEEGQVVTGKVARLTDFGAFVEVNGLDGLLHVSDIAWSRVEHPSDVLNVG 512 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE 298 DEI VK+LK ++E+ R+SLG KQL E P+ A ++ G +TG+V NL D+G FVE+ + Sbjct: 513 DEIEVKILKLNQEKNRISLGRKQLLEKPFEAFVNQHEVGDVVTGKVVNLLDFGAFVEVAD 572 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQ 356 GVEGLVHVSE+ W + PS +NVGD +EV ++ ID + ++ L +K K P + Sbjct: 573 GVEGLVHVSEISWEH-VEKPSDELNVGDEIEVKIISIDTDEEKVGLSIKALKEAPERP 629 Score = 271 bits (693), Expect = 5e-71, Method: Composition-based stats. Identities = 126/371 (33%), Positives = 193/371 (52%), Gaps = 8/371 (2%) Query: 160 DQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLL 218 D+ VV S + E + L+ + VKG V ++ D FVD+ DG++ Sbjct: 264 DEIIEEVVSSMDEFTKEEFMNSLEDSLKKIYPKEIVKGTVIDVKDDEVFVDIQFRADGII 323 Query: 219 HITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLG-EDPWVAIAKRYPEG 277 + +M + K P NVGDEI V V+K D VSL +++ W +A++ Sbjct: 324 KLDEMTEEEAKDPKNSFNVGDEIDVFVIKLDDGEGNVSLSTRRVEGMKVWKDLAEKAEND 383 Query: 278 TKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDE 337 + G V+ G V +E G+ G V S++ T + K V G+ ++ ++ IDE Sbjct: 384 ELVHGVVSGFNKGGLTVNVE-GINGFVPASQIA-TYFVKNFKKFV--GEEWDLKIISIDE 439 Query: 338 ERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDIS 397 + R+ L K+ + E +G V GK+ +TDFG F+ + G+DGL+H+SDI+ Sbjct: 440 RKNRLVLSRKEVVEDELDGLWEELEEGQVVTGKVARLTDFGAFVEV-NGLDGLLHVSDIA 498 Query: 398 WNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGK 457 W+ E GDEI +L+++ E+ RISLG KQL E PF +V ++ G +VTGK Sbjct: 499 WSRV-EHPSDVLNVGDEIEVKILKLNQEKNRISLGRKQLLEKPFEAFVNQHEVGDVVTGK 557 Query: 458 VTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISL 517 V + GA VE+ADGVEG + SE S + VE + L+VGDE+E K +D + L Sbjct: 558 VVNLLDFGAFVEVADGVEGLVHVSEISWEHVEKPSDELNVGDEIEVKIISIDTDEEKVGL 617 Query: 518 SVRAKDEADEK 528 S++A EA E+ Sbjct: 618 SIKALKEAPER 628 Score = 161 bits (407), Expect = 8e-38, Method: Composition-based stats. Identities = 72/277 (25%), Positives = 134/277 (48%), Gaps = 11/277 (3%) Query: 260 KQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPS 319 K+ + K+ + G V ++ D FV+I+ +G++ + EM + P Sbjct: 279 KEEFMNSLEDSLKKIYPKEIVKGTVIDVKDDEVFVDIQFRADGIIKLDEMT-EEEAKDPK 337 Query: 320 KVVNVGDVVEVMVLDIDEERRRISLGLKQCKA-NPWQQFAETHNKGDRVEGKIKSITDFG 378 NVGD ++V V+ +D+ +SL ++ + W+ AE + V G + G Sbjct: 338 NSFNVGDEIDVFVIKLDDGEGNVSLSTRRVEGMKVWKDLAEKAENDELVHGVVSGFNKGG 397 Query: 379 IFIGLDGGIDGLVHLSDISWNVAGEEAVREYKK--GDEIAAVVLQVDAERERISLGVKQL 436 + + ++ GI+G V S I+ + +KK G+E ++ +D + R+ L K++ Sbjct: 398 LTVNVE-GINGFVPASQIATYFV-----KNFKKFVGEEWDLKIISIDERKNRLVLSRKEV 451 Query: 437 AEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLS 496 ED + ++G +VTGKV + GA VE+ +G++G L S+ + RVE + VL+ Sbjct: 452 VEDELDGLWEELEEGQVVTGKVARLTDFGAFVEV-NGLDGLLHVSDIAWSRVEHPSDVLN 510 Query: 497 VGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIAT 533 VGDE+E K ++++ ISL + E + + Sbjct: 511 VGDEIEVKILKLNQEKNRISLGRKQLLEKPFEAFVNQ 547 Score = 63.1 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 42/106 (39%) Query: 434 KQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATL 493 K+ + + + IV G V V V++ +G ++ E + + +D Sbjct: 279 KEEFMNSLEDSLKKIYPKEIVKGTVIDVKDDEVFVDIQFRADGIIKLDEMTEEEAKDPKN 338 Query: 494 VLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQED 539 +VGDE++ +D +SLS R + +A + ++ Sbjct: 339 SFNVGDEIDVFVIKLDDGEGNVSLSTRRVEGMKVWKDLAEKAENDE 384 >UniRef50_A9AV75 RNA binding S1 domain protein n=5 Tax=Chloroflexi (class) RepID=A9AV75_HERA2 Length = 415 Score = 334 bits (856), Expect = 6e-90, Method: Composition-based stats. Identities = 131/355 (36%), Positives = 209/355 (58%), Gaps = 15/355 (4%) Query: 7 QLFEESLKEI-----ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL- 60 L EE L++ + G V G +V +D+D VLVD G KSE +P + + E Sbjct: 35 ALLEEYLRDPAHDYRNLKYGDSVDGTIVRVDRDEVLVDIGSKSEGVVPGREMTSLSSEER 94 Query: 61 -EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGG 119 E++VGD + V + ED G +LS +KA++ ++W L+ +E + + + KGG Sbjct: 95 AELKVGDVLLVTVVQTEDAEGRIVLSIDKARQEKSWRALQVNHEAGDVIHAAVTNYNKGG 154 Query: 120 FTVELNGIRAFLPGSLV-------DVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRA 172 V L+G+R F+P S V DV+ D L G+ L K+I++++ RN +++S R Sbjct: 155 LLVNLSGVRGFVPSSQVSSVSRGSDVQKQSDMAKLVGQTLPLKIIEINRSRNRLILSERQ 214 Query: 173 VIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPS 232 ++ + +DQLLE L+ G G V +L D+GAFVD+GG DGL+H+++++W RVKHP Sbjct: 215 AVQEVRDSRKDQLLEKLEPGAVRTGRVTSLCDFGAFVDIGGADGLVHLSELSWSRVKHPE 274 Query: 233 EIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGC 292 E++ VGD ++V +L D ++ R++L +K+ +PW + RY G ++G VT LT +G Sbjct: 275 EVLKVGDAVSVYILSVDEDKKRIALSIKRTQAEPWTTVTDRYQIGQSVSGVVTQLTAFGA 334 Query: 293 FVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLK 347 FV +E+G+EGL+H+SEM + HP V+N GD V ++ ID R+RI L + Sbjct: 335 FVRLEDGIEGLIHISEMSDE-RIQHPRDVINEGDSVSARIIRIDPTRKRIGLSTR 388 Score = 244 bits (622), Expect = 9e-63, Method: Composition-based stats. Identities = 102/360 (28%), Positives = 174/360 (48%), Gaps = 15/360 (4%) Query: 171 RAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVK 229 RA++E NL+ G V G + + VD+G +G++ +M + Sbjct: 34 RALLEEYLRDP-AHDYRNLKYGDSVDGTIVRVDRDEVLVDIGSKSEGVVPGREMTSLSSE 92 Query: 230 HPSEIVNVGDEITVKVLKFDRERTRVSLGL-KQLGEDPWVAIAKRYPEGTKLTGRVTNLT 288 +E + VGD + V V++ + R+ L + K E W A+ + G + VTN Sbjct: 93 ERAE-LKVGDVLLVTVVQTEDAEGRIVLSIDKARQEKSWRALQVNHEAGDVIHAAVTNYN 151 Query: 289 DYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNV----GDVVEVMVLDIDEERRRISL 344 G V + GV G V S++ ++ K ++ G + + +++I+ R R+ L Sbjct: 152 KGGLLVNLS-GVRGFVPSSQVSSVSRGSDVQKQSDMAKLVGQTLPLKIIEINRSRNRLIL 210 Query: 345 GLKQC----KANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNV 400 +Q + + Q E G G++ S+ DFG F+ + GG DGLVHLS++SW+ Sbjct: 211 SERQAVQEVRDSRKDQLLEKLEPGAVRTGRVTSLCDFGAFVDI-GGADGLVHLSELSWSR 269 Query: 401 AGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTA 460 + K GD ++ +L VD +++RI+L +K+ +P+ + G V+G VT Sbjct: 270 V-KHPEEVLKVGDAVSVYILSVDEDKKRIALSIKRTQAEPWTTVTDRYQIGQSVSGVVTQ 328 Query: 461 VDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 + A GA V L DG+EG + SE S +R++ V++ GD V A+ +D + I LS R Sbjct: 329 LTAFGAFVRLEDGIEGLIHISEMSDERIQHPRDVINEGDSVSARIIRIDPTRKRIGLSTR 388 >UniRef50_Q0AXA2 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AXA2_SYNWW Length = 687 Score = 333 bits (855), Expect = 9e-90, Method: Composition-based stats. Identities = 131/371 (35%), Positives = 215/371 (57%), Gaps = 9/371 (2%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE-- 59 ESFA+L E G +++G V+ + D V+VD G KSE IP + + Sbjct: 317 EESFAKLEAEMADFTTPNKGDVIKGKVIQVLDDEVMVDVGGKSEGIIPLREMSLQDIDSA 376 Query: 60 -LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 ++VGDE++V + +D G LLS++K LE+++++ + +TG + G VKG Sbjct: 377 KELVEVGDEIEVMVLKWDD-DGTILLSKKKVDAKILLDELEESFKEGKVITGTVTGSVKG 435 Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNN---VVVSRRAVIE 175 G V++ GI AFLP S V+ V++ +EL FK+I+ ++ + VV+SR+ ++ Sbjct: 436 GLLVDV-GIVAFLPASHVEDGYVKNLDEYINRELSFKIIEFNRNKRRGSQVVLSRKELVA 494 Query: 176 SENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIV 235 E + ++ Q E ++EG KG +K L DYGAF+DLGG +GLLH++++A R+ PS+++ Sbjct: 495 EEKAKQKKQFWEEIEEGQVRKGRIKRLVDYGAFIDLGGYEGLLHVSEIAHTRIDQPSDVL 554 Query: 236 NVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVE 295 G+EI V +L DRE+ RVSL K+L + PW + +++ EG + G V + +G FVE Sbjct: 555 QEGEEIDVYILALDREKERVSLSRKKLLKSPWEIVMEKFQEGDIIEGTVVRIAPFGAFVE 614 Query: 296 IEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQ 355 IE GV+GLVH+S++ ++ P VV V + +++ +L ID E +RI L LK+ Sbjct: 615 IEAGVDGLVHISQLA-NHRVEKPEDVVQVNEKIKIKILSIDPEEKRIGLSLKEALNEMEN 673 Query: 356 QFAETHNKGDR 366 Q + + + Sbjct: 674 QEVQDYMEKQE 684 Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats. Identities = 98/366 (26%), Positives = 185/366 (50%), Gaps = 17/366 (4%) Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 +G +KG V + D VD+GG +G++ + +M+ + + E+V VGDEI V Sbjct: 330 FTTPNKGDVIKGKVIQVLDDEVMVDVGGKSEGIIPLREMSLQDIDSAKELVEVGDEIEVM 389 Query: 245 VLKFDRERTRVSLGLKQLGEDPW-VAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGL 303 VLK+D + + L K++ + + + EG +TG VT G V++ G+ Sbjct: 390 VLKWD-DDGTILLSKKKVDAKILLDELEESFKEGKVITGTVTGSVKGGLLVDV--GIVAF 446 Query: 304 VHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRR---ISLGLKQC----KANPWQQ 356 + S ++ + + +N + +++ + +RR + L K+ KA +Q Sbjct: 447 LPASHVEDGY-VKNLDEYINR--ELSFKIIEFNRNKRRGSQVVLSRKELVAEEKAKQKKQ 503 Query: 357 FAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIA 416 F E +G +G+IK + D+G FI L GG +GL+H+S+I+ ++ ++G+EI Sbjct: 504 FWEEIEEGQVRKGRIKRLVDYGAFIDL-GGYEGLLHVSEIAHTRI-DQPSDVLQEGEEID 561 Query: 417 AVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEG 476 +L +D E+ER+SL K+L + P+ + ++G I+ G V + GA VE+ GV+G Sbjct: 562 VYILALDREKERVSLSRKKLLKSPWEIVMEKFQEGDIIEGTVVRIAPFGAFVEIEAGVDG 621 Query: 477 YLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNK 536 + S+ + RVE V+ V ++++ K +D + + I LS++ E + + Sbjct: 622 LVHISQLANHRVEKPEDVVQVNEKIKIKILSIDPEEKRIGLSLKEALNEMENQEVQDYME 681 Query: 537 QEDANF 542 +++ N Sbjct: 682 KQEENE 687 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 76/181 (41%), Gaps = 8/181 (4%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE---IQVGDEVDVALD 73 E G + +G + + +D G E + + + + + +Q G+E+DV + Sbjct: 507 EIEEGQVRKGRIKRLVDYGAFIDLGG-YEGLLHVSEIAHTRIDQPSDVLQEGEEIDVYIL 565 Query: 74 AVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFLP 132 A++ LSR+K + W + + +++ + + G + G VE+ G+ + Sbjct: 566 ALDREKERVSLSRKKLLKSP-WEIVMEKFQEGDIIEGTVVRIAPFGAFVEIEAGVDGLVH 624 Query: 133 GSLVDVRPVRDTLHLE--GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQ 190 S + V + ++++ K++ +D + + +S + + + E +E + Sbjct: 625 ISQLANHRVEKPEDVVQVNEKIKIKILSIDPEEKRIGLSLKEALNEMENQEVQDYMEKQE 684 Query: 191 E 191 E Sbjct: 685 E 685 >UniRef50_A3DDC0 Hydroxymethylbutenyl pyrophosphate reductase n=7 Tax=Clostridiales RepID=A3DDC0_CLOTH Length = 694 Score = 330 bits (847), Expect = 8e-89, Method: Composition-based stats. Identities = 131/365 (35%), Positives = 218/365 (59%), Gaps = 7/365 (1%) Query: 4 SFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA---QGEL 60 FA FE S + G V+G ++ + + V VD G K++ IP E++ + E Sbjct: 295 DFANAFENSF--VRIHAGDTVKGKIIGFNSNEVFVDLGYKADGIIPLEEYTDDPNFNIEK 352 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 E+++G+EV+V ++ V DG G LS+ K ++W + KAYE+ V + VKGG Sbjct: 353 EVKIGEEVEVLVEMVNDGEGNVRLSKRKVDAIKSWDDIVKAYENKTPVNAYVVEVVKGGV 412 Query: 121 TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 G+R F+P S V R V+D + + ++++L++KR VV S R +IE E A Sbjct: 413 IASYKGVRIFVPASQVSDRYVKDLNEFLKRSITVRILELNEKRRKVVGSARVIIEEEKEA 472 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 ++ +++ G KG VK+LTD+GAFVD+GGVDGL+HI++++W RVKHPSE++ VGDE Sbjct: 473 LANRTWNSMEVGKVFKGTVKSLTDFGAFVDIGGVDGLIHISELSWTRVKHPSEVLKVGDE 532 Query: 241 ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV 300 + V VL+FD+E+ +VSLG +++ ++PW I ++Y G + V +G FVE+E+GV Sbjct: 533 VEVTVLEFDKEKKKVSLGYRKMEDNPWYKIEEKYKVGDVVKVTVLRFAPFGAFVELEKGV 592 Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKA-NPWQQFAE 359 +GLVH+S++ + + + +G V+ ++++D E ++ISL +K+ +P +E Sbjct: 593 DGLVHISQIS-SKRLAKVEDALEIGMKVDAKIIEVDGENKKISLSIKEVMPIDPPSSKSE 651 Query: 360 THNKG 364 + K Sbjct: 652 SKAKD 656 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 100/385 (25%), Positives = 174/385 (45%), Gaps = 15/385 (3%) Query: 175 ESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSE 233 E + + + + G VKG + FVDLG DG++ + + + + Sbjct: 293 EIDFANAFENSFVRIHAGDTVKGKIIGFNSNEVFVDLGYKADGIIPLEEYTDDPNFNIEK 352 Query: 234 IVNVGDEITVKVLKFDRERTRVSLGLKQLGE-DPWVAIAKRYPEGTKLTGRVTNLTDYGC 292 V +G+E+ V V + V L +++ W I K Y T + V + G Sbjct: 353 EVKIGEEVEVLVEMVNDGEGNVRLSKRKVDAIKSWDDIVKAYENKTPVNAYVVEVVKGGV 412 Query: 293 FVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLK----Q 348 +GV V S++ ++ + + V +L+++E+RR++ + + Sbjct: 413 IAS-YKGVRIFVPASQVS-DRYVKDLNEFLKR--SITVRILELNEKRRKVVGSARVIIEE 468 Query: 349 CKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVRE 408 K + + G +G +KS+TDFG F+ + GG+DGL+H+S++SW + Sbjct: 469 EKEALANRTWNSMEVGKVFKGTVKSLTDFGAFVDI-GGVDGLIHISELSWTRV-KHPSEV 526 Query: 409 YKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATV 468 K GDE+ VL+ D E++++SLG +++ ++P+ K G +V V GA V Sbjct: 527 LKVGDEVEVTVLEFDKEKKKVSLGYRKMEDNPWYKIEEKYKVGDVVKVTVLRFAPFGAFV 586 Query: 469 ELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEAD-- 526 EL GV+G + S+ S R+ L +G +V+AK VD +N+ ISLS++ D Sbjct: 587 ELEKGVDGLVHISQISSKRLAKVEDALEIGMKVDAKIIEVDGENKKISLSIKEVMPIDPP 646 Query: 527 -EKDAIATVNKQEDANFSNNAMAEA 550 K + E S N EA Sbjct: 647 SSKSESKAKDGSEAKETSANTEEEA 671 >UniRef50_D1VSI0 4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VSI0_9FIRM Length = 725 Score = 328 bits (842), Expect = 3e-88, Method: Composition-based stats. Identities = 131/368 (35%), Positives = 218/368 (59%), Gaps = 6/368 (1%) Query: 4 SFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK---NAQGEL 60 + + S K I + G IV G V+ + + V+V+ G +S+ I E+ +A+ Sbjct: 276 EMMEAIDNSFKRI--KKGEIVTGEVLYVTDNEVMVNLGYRSDGIISKEELSKNTDAKPSD 333 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 + GDE++V + ++DG G +LS + + + W +E++Y + E VT + +VKGG Sbjct: 334 LYKQGDEIEVFVLKMDDGDGNVVLSARRVEDMKVWDEIEESYNNHEIVTAKVINQVKGGL 393 Query: 121 TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 T L+GI AF+P S V V+ RD G + + ++I D+++ +V+SR+ V+ E Sbjct: 394 TASLDGISAFIPASHVTVKFQRDLSKFVGDDFQCEIIDFDKRKRRIVLSRKNVLMRELEE 453 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 +R Q+ E+L G ++G V+ LT++GAFVD+GG+DGL+HI++++W RVKHPSE+V+ GD+ Sbjct: 454 KRSQIFESLHIGDVIEGTVQRLTNFGAFVDIGGIDGLVHISELSWNRVKHPSEVVSAGDK 513 Query: 241 ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV 300 + V+VL D E+ R++LGLKQ E PW G + G+V N+ D+G FV +EEGV Sbjct: 514 VKVQVLSLDEEKDRIALGLKQTTEKPWDKFINAVKVGDVVKGKVVNILDFGAFVRLEEGV 573 Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAET 360 +GL+HVS++ P + +G VEV V++ID+E ++ISL +K + Sbjct: 574 DGLLHVSQI-CREHIEKPQDRLEIGQEVEVKVIEIDQENKKISLSIKALLEPIEDDENKE 632 Query: 361 HNKGDRVE 368 + +V+ Sbjct: 633 KTEKPKVK 640 Score = 238 bits (607), Expect = 5e-61, Method: Composition-based stats. Identities = 119/386 (30%), Positives = 193/386 (50%), Gaps = 12/386 (3%) Query: 160 DQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLL 218 D+ V S + E D + +++G V G V +TD V+LG DG++ Sbjct: 259 DKVIKEAVSSMENFDKGEMMEAIDNSFKRIKKGEIVTGEVLYVTDNEVMVNLGYRSDGII 318 Query: 219 HITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGE-DPWVAIAKRYPEG 277 +++ PS++ GDEI V VLK D V L +++ + W I + Y Sbjct: 319 SKEELSKNTDAKPSDLYKQGDEIEVFVLKMDDGDGNVVLSARRVEDMKVWDEIEESYNNH 378 Query: 278 TKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDE 337 +T +V N G + +G+ + S + + SK V GD + ++D D+ Sbjct: 379 EIVTAKVINQVKGGLTASL-DGISAFIPASHVTVKFQR-DLSKFV--GDDFQCEIIDFDK 434 Query: 338 ERRRISLGLK----QCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHL 393 +RRI L K + Q E+ + GD +EG ++ +T+FG F+ + GGIDGLVH+ Sbjct: 435 RKRRIVLSRKNVLMRELEEKRSQIFESLHIGDVIEGTVQRLTNFGAFVDI-GGIDGLVHI 493 Query: 394 SDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAI 453 S++SWN + GD++ VL +D E++RI+LG+KQ E P++ ++ K G + Sbjct: 494 SELSWNRV-KHPSEVVSAGDKVKVQVLSLDEEKDRIALGLKQTTEKPWDKFINAVKVGDV 552 Query: 454 VTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNR 513 V GKV + GA V L +GV+G L S+ R+ +E L +G EVE K +D++N+ Sbjct: 553 VKGKVVNILDFGAFVRLEEGVDGLLHVSQICREHIEKPQDRLEIGQEVEVKVIEIDQENK 612 Query: 514 AISLSVRAKDEADEKDAIATVNKQED 539 ISLS++A E E D ++ Sbjct: 613 KISLSIKALLEPIEDDENKEKTEKPK 638 Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats. Identities = 118/379 (31%), Positives = 187/379 (49%), Gaps = 17/379 (4%) Query: 87 EKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIR--AFLPGSLVDVRPVRDT 144 +K + EA K + E VTG + V L G R + + Sbjct: 273 DKGEMMEAIDNSFKRIKKGEIVTGEVLYVTDNEVMVNL-GYRSDGIISKEELSKNTDAKP 331 Query: 145 LHL--EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNL 202 L +G E+E V+K+D NVV+S R V + + E ++ N + V V N Sbjct: 332 SDLYKQGDEIEVFVLKMDDGDGNVVLSARRVEDMKVWDEIEESYNNHE---IVTAKVINQ 388 Query: 203 TDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQL 262 G L G+ + + + K + S+ VGD+ +++ FD+ + R+ L K + Sbjct: 389 VKGGLTASLDGISAFIPASHVTVKFQRDLSKF--VGDDFQCEIIDFDKRKRRIVLSRKNV 446 Query: 263 G----EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHP 318 E+ I + G + G V LT++G FV+I G++GLVH+SE+ W N+ HP Sbjct: 447 LMRELEEKRSQIFESLHIGDVIEGTVQRLTNFGAFVDIG-GIDGLVHISELSW-NRVKHP 504 Query: 319 SKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFG 378 S+VV+ GD V+V VL +DEE+ RI+LGLKQ PW +F GD V+GK+ +I DFG Sbjct: 505 SEVVSAGDKVKVQVLSLDEEKDRIALGLKQTTEKPWDKFINAVKVGDVVKGKVVNILDFG 564 Query: 379 IFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAE 438 F+ L+ G+DGL+H+S I E+ + G E+ V+++D E ++ISL +K L E Sbjct: 565 AFVRLEEGVDGLLHVSQIC-REHIEKPQDRLEIGQEVEVKVIEIDQENKKISLSIKALLE 623 Query: 439 DPFNNWVALNKKGAIVTGK 457 ++ + V + Sbjct: 624 PIEDDENKEKTEKPKVKKE 642 >UniRef50_B2A4N7 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A4N7_NATTJ Length = 705 Score = 327 bits (838), Expect = 8e-88, Method: Composition-based stats. Identities = 123/361 (34%), Positives = 212/361 (58%), Gaps = 6/361 (1%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE-- 59 + + E+S +++ G +V+G VV + +D ++D G K E ++P + +GE Sbjct: 309 QDELMKATEDSADKLD--RGQVVKGKVVKVTEDEAMIDVGYKFEGSVPVNEMPIKEGESL 366 Query: 60 -LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 + GDE+DV + V+D G+ +LS++ A + + W LE+ E+ E + + +VKG Sbjct: 367 EDLLSEGDEIDVKVVKVDDEEGQLILSKKWADKDKQWEQLEQLMENDEEIKAQVTEEVKG 426 Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 G V+L ++ F+P S VD+ V D G+EL K I+LD+ RN +V+S++ ++E E Sbjct: 427 GLVVDLGQLQGFIPASHVDIHYVPDLSKYVGEELRLKPIELDRSRNKIVLSQKNILEQEQ 486 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVG 238 ++++ +E + EG V G VK LTD+GAF+D+GG+DGL HI+ ++ R+ HP + G Sbjct: 487 EEKKNKTMETITEGDIVDGTVKRLTDFGAFIDIGGIDGLCHISQISHSRIDHPESELETG 546 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE 298 + + VKVL D E R+SL +K+ DP+ K+Y G + G+V ++G F+EI Sbjct: 547 ENVKVKVLSLDPENERISLSIKEAQPDPFETFMKQYKSGDIVQGKVVRTVNFGAFIEITP 606 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFA 358 GVEGL H+S++ + VVN GD V V +L ID++++++SL +K+ + ++ Sbjct: 607 GVEGLCHISQLS-DDHVAKTQDVVNEGDQVTVKILSIDDQQKKVSLSIKEAQGKSKKEQE 665 Query: 359 E 359 + Sbjct: 666 Q 666 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 115/407 (28%), Positives = 197/407 (48%), Gaps = 19/407 (4%) Query: 150 KELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQL---LENLQEGMEVKGIVKNLTDYG 206 KE+ K+ + +++ N+ + + + L G VKG V +T+ Sbjct: 281 KEVVGKMREFEEQNENLNTNSDESTQESQDELMKATEDSADKLDRGQVVKGKVVKVTEDE 340 Query: 207 AFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGED 265 A +D+G +G + + +M K + ++++ GDEI VKV+K D E ++ L K +D Sbjct: 341 AMIDVGYKFEGSVPVNEMPIKEGESLEDLLSEGDEIDVKVVKVDDEEGQLILSKKWADKD 400 Query: 266 -PWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNV 324 W + + ++ +VT G V++ + ++G + S +D + SK V Sbjct: 401 KQWEQLEQLMENDEEIKAQVTEEVKGGLVVDLGQ-LQGFIPASHVD-IHYVPDLSKYV-- 456 Query: 325 GDVVEVMVLDIDEERRRISLGLK----QCKANPWQQFAETHNKGDRVEGKIKSITDFGIF 380 G+ + + +++D R +I L K Q + + ET +GD V+G +K +TDFG F Sbjct: 457 GEELRLKPIELDRSRNKIVLSQKNILEQEQEEKKNKTMETITEGDIVDGTVKRLTDFGAF 516 Query: 381 IGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDP 440 I + GGIDGL H+S IS + + E + G+ + VL +D E ERISL +K+ DP Sbjct: 517 IDI-GGIDGLCHISQISHSRI-DHPESELETGENVKVKVLSLDPENERISLSIKEAQPDP 574 Query: 441 FNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDE 500 F ++ K G IV GKV GA +E+ GVEG S+ S D V V++ GD+ Sbjct: 575 FETFMKQYKSGDIVQGKVVRTVNFGAFIEITPGVEGLCHISQLSDDHVAKTQDVVNEGDQ 634 Query: 501 VEAKFTGVDRKNRAISLSVRAKD----EADEKDAIATVNKQEDANFS 543 V K +D + + +SLS++ + E++ A ++ Sbjct: 635 VTVKILSIDDQQKKVSLSIKEAQGKSKKEQEQEEFAKYQDSQEEEEG 681 Score = 51.1 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 38/91 (41%), Gaps = 3/91 (3%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQGELEIQVGDEVDVALD 73 + + G IV+G VV ++ E Q + A+ + + GD+V V + Sbjct: 581 QYKSGDIVQGKVVRTVNFGAFIEITPGVEGLCHISQLSDDHVAKTQDVVNEGDQVTVKIL 640 Query: 74 AVEDGFGETLLSREKAKRHEAWITLEKAYED 104 +++D + LS ++A+ ++ + Sbjct: 641 SIDDQQKKVSLSIKEAQGKSKKEQEQEEFAK 671 >UniRef50_B3WE79 30S Ribosomal protein S1 n=52 Tax=Firmicutes RepID=B3WE79_LACCB Length = 439 Score = 326 bits (837), Expect = 9e-88, Method: Composition-based stats. Identities = 125/371 (33%), Positives = 209/371 (56%), Gaps = 9/371 (2%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDA-GLKSESAIPAEQFKNAQGEL 60 E+ + + + G V+ V+A++ ++V G E +P ++ + Sbjct: 7 NENTETMADALKSVTTVKIGDTVKADVLAVEDKQLIVGIEGTGVEGVVPIKELSTQPIDD 66 Query: 61 EI---QVGDEVDVAL---DAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVING 114 +VGD++D+ + + G+ LLS+ + + + W ++ YE ET+T + Sbjct: 67 IHDVAKVGDKLDLVVLSTVGKDKENGQFLLSKRRLEAQKVWKEIQAKYEAGETITAPVTS 126 Query: 115 KVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVI 174 VKGG V G+R F+P S+V+ V D +GKELEFK+I+++ N +++S RA++ Sbjct: 127 VVKGGLVVN-AGVRGFVPASMVEDHFVEDLSQYKGKELEFKIIEIEPSENRLILSHRAIV 185 Query: 175 ESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEI 234 E+ + R ++ +Q G V+G V LT++GAFVDLGGVDGL+H++++++ V PS++ Sbjct: 186 EASKAEARKEIFAKIQPGDTVEGKVARLTNFGAFVDLGGVDGLVHVSEISFDHVDKPSDV 245 Query: 235 VNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFV 294 + VG EI VKVL D +R R+SL +K PW I ++ P G+ LTG V LT +G FV Sbjct: 246 LKVGQEIKVKVLNVDPDRNRISLSIKATLPQPWDDIEEKAPAGSVLTGTVKRLTTFGAFV 305 Query: 295 EIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPW 354 E+ GVEGLVH+S++ + P+ V+ G V+V VL +D + R++L +K + P Sbjct: 306 EVFPGVEGLVHISQISHEH-VATPADVLKEGQEVQVKVLSVDPDAHRLALSIKALQERPA 364 Query: 355 QQFAETHNKGD 365 E+H G+ Sbjct: 365 GSEEESHEGGN 375 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 110/378 (29%), Positives = 182/378 (48%), Gaps = 20/378 (5%) Query: 175 ESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG--VDGLLHITDMAWKRVKHPS 232 +E A+ + + ++ G VK V + D V + G V+G++ I +++ + + Sbjct: 9 NTETMADALKSVTTVKIGDTVKADVLAVEDKQLIVGIEGTGVEGVVPIKELSTQPIDDIH 68 Query: 233 EIVNVGDEITVKVLKF---DRERTRVSLGLKQLGEDP-WVAIAKRYPEGTKLTGRVTNLT 288 ++ VGD++ + VL D+E + L ++L W I +Y G +T VT++ Sbjct: 69 DVAKVGDKLDLVVLSTVGKDKENGQFLLSKRRLEAQKVWKEIQAKYEAGETITAPVTSVV 128 Query: 289 DYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQ 348 G V GV G V S M + S+ G +E +++I+ R+ L + Sbjct: 129 KGGLVVN--AGVRGFVPAS-MVEDHFVEDLSQY--KGKELEFKIIEIEPSENRLILSHRA 183 Query: 349 ----CKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEE 404 KA ++ GD VEGK+ +T+FG F+ L GG+DGLVH+S+IS++ ++ Sbjct: 184 IVEASKAEARKEIFAKIQPGDTVEGKVARLTNFGAFVDL-GGVDGLVHVSEISFDHV-DK 241 Query: 405 AVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAK 464 K G EI VL VD +R RISL +K P+++ G+++TG V + Sbjct: 242 PSDVLKVGQEIKVKVLNVDPDRNRISLSIKATLPQPWDDIEEKAPAGSVLTGTVKRLTTF 301 Query: 465 GATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDE 524 GA VE+ GVEG + S+ S + V VL G EV+ K VD ++LS++A E Sbjct: 302 GAFVEVFPGVEGLVHISQISHEHVATPADVLKEGQEVQVKVLSVDPDAHRLALSIKALQE 361 Query: 525 AD---EKDAIATVNKQED 539 E+++ N D Sbjct: 362 RPAGSEEESHEGGNSSRD 379 >UniRef50_Q1D6H1 Ribosomal protein S1 family protein n=2 Tax=Cystobacterineae RepID=Q1D6H1_MYXXD Length = 548 Score = 325 bits (834), Expect = 2e-87, Method: Composition-based stats. Identities = 149/503 (29%), Positives = 239/503 (47%), Gaps = 44/503 (8%) Query: 2 TESFAQLFEESLKE------IETRPGSIVRGVVVAIDKDVVLVDA--GLKSESAIPAEQF 53 +SFA++FE KE R G VRG + + D V KSE+ I + Sbjct: 50 AQSFAEMFEAQAKEGGTPSRKGLRVGEKVRGTIFQLGADTAFVSVEGAAKSEAMIELREL 109 Query: 54 KNAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVIN 113 K+ +G L VGD +D + V G LLSR AK L +A V G++ Sbjct: 110 KDDEGILRFGVGDTIDAHVVEV--GAKGILLSRALAKGSANLALLAEARASGMPVEGLVL 167 Query: 114 GKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAV 173 KGG V + IRAF P S +D+R V G++L+F+V ++ + NVV+SRR++ Sbjct: 168 SVNKGGVEVAIGDIRAFCPISQLDLRYVEKPDQFIGEKLQFRVSEVRE--RNVVLSRRSL 225 Query: 174 IESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSE 233 +E E + +NL +G VKG V + D+G FVDLGGV+G++ ++++++ RV HPS+ Sbjct: 226 LEDEQRQLAAETRKNLAQGKIVKGKVTGVRDFGVFVDLGGVEGMIPVSELSYTRVGHPSD 285 Query: 234 IVNVGDEITVKVLKFD----------RERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGR 283 +V VGD++ V++L+ + +++ R++L ++ EDP+ EG +L G+ Sbjct: 286 VVKVGDDVEVEILRMEAGQPNSPDKSKQKERITLSMRSRQEDPFQKALSEIKEGDRLQGK 345 Query: 284 VTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRIS 343 V L +G FVE+ GV+GLVH+S + + HP VV G+ + V V ID + +RI Sbjct: 346 VVRLQQFGAFVELRPGVDGLVHISALS-DRRIAHPRDVVKEGETIWVSVEKIDTQEKRIG 404 Query: 344 L---GLKQCKANPWQQFAETHNKGDRVEGKIK-------------SITDFGIFIGLDGGI 387 L ++ + P ++ A + I +G+F+ GG Sbjct: 405 LRRISEEEAQRPPEERTAPAAEAAAPAQPATPRPKVGQVVVGKVDRIEPYGVFLAFPGG- 463 Query: 388 DGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVAL 447 GL+ S+ + G + + Y G E+ +L +DA +I L V V Sbjct: 464 KGLLPASE-TGTERGTDLRKHYSLGQEVKVAILDIDAS-GKIRLSVTAAIRAEERAEVEA 521 Query: 448 NKKGAIVTGKVTAVDAKGATVEL 470 +K G G +L Sbjct: 522 WQKTQQPQGA--GKKGFGTFADL 542 Score = 221 bits (563), Expect = 5e-56, Method: Composition-based stats. Identities = 118/459 (25%), Positives = 213/459 (46%), Gaps = 52/459 (11%) Query: 135 LVDVRPVRD----TLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQ 190 ++++R ++D G ++ V+++ K +++SR S N A + + Sbjct: 103 MIELRELKDDEGILRFGVGDTIDAHVVEVGAKG--ILLSRALAKGSANLALLAEARAS-- 158 Query: 191 EGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDR 250 GM V+G+V ++ G V +G + I+ + + V+ P + +G+++ +V + Sbjct: 159 -GMPVEGLVLSVNKGGVEVAIGDIRAFCPISQLDLRYVEKPDQF--IGEKLQFRVSEVRE 215 Query: 251 ERTRVSLGLKQLGEDPWVAIAKRY----PEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHV 306 V L + L ED +A +G + G+VT + D+G FV++ GVEG++ V Sbjct: 216 RN--VVLSRRSLLEDEQRQLAAETRKNLAQGKIVKGKVTGVRDFGVFVDLG-GVEGMIPV 272 Query: 307 SEMDWTNKNIHPSKVVNVGDVVEVMVLDID----------EERRRISLGLKQCKANPWQQ 356 SE+ +T + HPS VV VGD VEV +L ++ +++ RI+L ++ + +P+Q+ Sbjct: 273 SELSYT-RVGHPSDVVKVGDDVEVEILRMEAGQPNSPDKSKQKERITLSMRSRQEDPFQK 331 Query: 357 FAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIA 416 +GDR++GK+ + FG F+ L G+DGLVH+S +S + K+G+ I Sbjct: 332 ALSEIKEGDRLQGKVVRLQQFGAFVELRPGVDGLVHISALS-DRRIAHPRDVVKEGETIW 390 Query: 417 AVVLQVDAERERISL---GVKQLAEDP-------------FNNWVALNKKGAIVTGKVTA 460 V ++D + +RI L ++ P K G +V GKV Sbjct: 391 VSVEKIDTQEKRIGLRRISEEEAQRPPEERTAPAAEAAAPAQPATPRPKVGQVVVGKVDR 450 Query: 461 VDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 ++ G + G +G L ASE +R D S+G EV+ +D + I LSV Sbjct: 451 IEPYGVFLAFPGG-KGLLPASETGTERGTDLRKHYSLGQEVKVAILDIDA-SGKIRLSVT 508 Query: 521 AKDEADEKDAIATVNKQEDANFSN----NAMAEAFKAAK 555 A A+E+ + K + + A+ A+ Sbjct: 509 AAIRAEERAEVEAWQKTQQPQGAGKKGFGTFADLLSKAR 547 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 81/363 (22%), Positives = 163/363 (44%), Gaps = 29/363 (7%) Query: 172 AVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV---DGLLHITDMAWKRV 228 + E++ + L+ G +V+G + L AFV + G + ++ + ++ Sbjct: 55 EMFEAQAKEGGTPSRKGLRVGEKVRGTIFQLGADTAFVSVEGAAKSEAMIELRELKDDEG 114 Query: 229 KHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLT 288 VGD I V++ + +S L + + +A+ G + G V ++ Sbjct: 115 IL---RFGVGDTIDAHVVEVGAKGILLSRALAKGSAN-LALLAEARASGMPVEGLVLSVN 170 Query: 289 DYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQ 348 G V I + + +S++D P + + G+ ++ V ++ R + L + Sbjct: 171 KGGVEVAIGD-IRAFCPISQLDL-RYVEKPDQFI--GEKLQFRVSEV--RERNVVLSRRS 224 Query: 349 CKANPWQQFA----ETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEE 404 + +Q A + +G V+GK+ + DFG+F+ L GG++G++ +S++S+ G Sbjct: 225 LLEDEQRQLAAETRKNLAQGKIVKGKVTGVRDFGVFVDL-GGVEGMIPVSELSYTRVG-H 282 Query: 405 AVREYKKGDEIAAVVLQVD----------AERERISLGVKQLAEDPFNNWVALNKKGAIV 454 K GD++ +L+++ ++ERI+L ++ EDPF ++ K+G + Sbjct: 283 PSDVVKVGDDVEVEILRMEAGQPNSPDKSKQKERITLSMRSRQEDPFQKALSEIKEGDRL 342 Query: 455 TGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRA 514 GKV + GA VEL GV+G + S S R+ V+ G+ + +D + + Sbjct: 343 QGKVVRLQQFGAFVELRPGVDGLVHISALSDRRIAHPRDVVKEGETIWVSVEKIDTQEKR 402 Query: 515 ISL 517 I L Sbjct: 403 IGL 405 >UniRef50_C1DT56 Ribosomal protein S01 n=3 Tax=Sulfurihydrogenibium RepID=C1DT56_SULAA Length = 573 Score = 324 bits (832), Expect = 4e-87, Method: Composition-based stats. Identities = 149/524 (28%), Positives = 272/524 (51%), Gaps = 20/524 (3%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE 61 F +L EES + ++G VV + +D V VD G K E+ + N + + Sbjct: 1 MNEFEKLMEESKESGFYSKNQKIKGKVVKVTEDKVFVDIGQKIEAVL------NRNEDQD 54 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 ++ G E++ D G +LSR E L+ A+E+ + V I K G+T Sbjct: 55 VEEGQEIEAVFTGKRDKDGYFILSRRGIVNKEKLQKLKDAFENKKKVKATILSKQDKGYT 114 Query: 122 VELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNN--VVVSRRAVIESENS 179 V + G R F+P S ++ + G E ++K +++ N +V+SR+ + E Sbjct: 115 VSVEGFRGFMPLSESSLKRDENLPE--GFTFEAYIVKFEERGRNPNIVISRKQALIEEKE 172 Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSEIVNVG 238 E++++L L+EG +VK V + GA + + V G L ++++W + + E++ VG Sbjct: 173 LEKEKILSLLKEGQKVKAKVVKVQPNGAVLSIEDVLYGFLPKSEISWDKSRKVEEVLKVG 232 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE 298 DE+ V V + + + L LK L +PW K G + ++ ++ G V++ Sbjct: 233 DEVEVVVKEI--KDKKPILSLKLLEGNPWDKFDKNI--GDVVEVKIKDINKGGLVVDLGL 288 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFA 358 +EG + SE+ + + K + VGD V + +ID+E+ ++ L +KQ + NP ++F Sbjct: 289 -LEGFIPNSEISHFD-YVKAKKNLKVGDTVVAKIFEIDKEKGKVKLSIKQAQENPLEKFL 346 Query: 359 ETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAV 418 + + G ++ K+K + F+ L G I+G+V L D++ N + + K+ Sbjct: 347 KENPVGSVIQAKVKDVKQKVAFVDL-GDIEGIVKLQDVTDNPSIKSISSLLKEDKTYRFK 405 Query: 419 VLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYL 478 VL + E++++ LG+KQL +D FN++V+ +K G +V GKV + KGA V++ D +EG++ Sbjct: 406 VLGI--EKDKVVLGIKQLLDDAFNDFVSKHKVGDVVKGKVKKLIEKGAFVDITDEIEGFI 463 Query: 479 RASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAK 522 SE S++R++ + LS+ EVEAK +D +N+ I+LS++ Sbjct: 464 PVSEISKERIKIPSDKLSLHQEVEAKIIKIDTQNKKITLSIKQL 507 Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats. Identities = 85/341 (24%), Positives = 166/341 (48%), Gaps = 18/341 (5%) Query: 18 TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQF---KNAQGELEIQVGDEVDVALDA 74 + G V+ VV + + ++ +P + K+ + E ++VGDEV+V + Sbjct: 182 LKEGQKVKAKVVKVQPNGAVLSIEDVLYGFLPKSEISWDKSRKVEEVLKVGDEVEVVVKE 241 Query: 75 VEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGS 134 ++D + +LS + + + W +K + V I KGG V+L + F+P S Sbjct: 242 IKDK--KPILSLKLLEGNP-WDKFDK--NIGDVVEVKIKDINKGGLVVDLGLLEGFIPNS 296 Query: 135 LVD-VRPVRDTLHL-EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEG 192 + V+ +L G + K+ ++D+++ V +S + E+ ++ L+ G Sbjct: 297 EISHFDYVKAKKNLKVGDTVVAKIFEIDKEKGKVKLSIKQAQEN----PLEKFLKENPVG 352 Query: 193 MEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWK-RVKHPSEIVNVGDEITVKVLKFDRE 251 ++ VK++ AFVDLG ++G++ + D+ +K S ++ KVL E Sbjct: 353 SVIQAKVKDVKQKVAFVDLGDIEGIVKLQDVTDNPSIKSISSLLKEDKTYRFKVLGI--E 410 Query: 252 RTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDW 311 + +V LG+KQL +D + ++ G + G+V L + G FV+I + +EG + VSE+ Sbjct: 411 KDKVVLGIKQLLDDAFNDFVSKHKVGDVVKGKVKKLIEKGAFVDITDEIEGFIPVSEISK 470 Query: 312 TNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN 352 I PS +++ VE ++ ID + ++I+L +KQ + Sbjct: 471 ERIKI-PSDKLSLHQEVEAKIIKIDTQNKKITLSIKQLILD 510 Score = 121 bits (305), Expect = 5e-26, Method: Composition-based stats. Identities = 58/258 (22%), Positives = 122/258 (47%), Gaps = 15/258 (5%) Query: 15 EIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQGELEIQVGDEVDVA 71 + + G +V + I+K ++VD GL E IP + + + + ++VGD V Sbjct: 261 KFDKNIGDVVEVKIKDINKGGLVVDLGL-LEGFIPNSEISHFDYVKAKKNLKVGDTVVAK 319 Query: 72 LDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFL 131 + ++ G+ LS ++A + K + + + V+L I + Sbjct: 320 IFEIDKEKGKVKLSIKQA-QENPLEKFLKENPVGSVIQAKVKDVKQKVAFVDLGDIEGIV 378 Query: 132 PGSLVDVRPVRDTLH---LEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLEN 188 V P ++ E K FKV+ +++ + VV+ + +++ + + Sbjct: 379 KLQDVTDNPSIKSISSLLKEDKTYRFKVLGIEKDK--VVLGIKQLLDDAFND----FVSK 432 Query: 189 LQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLK 247 + G VKG VK L + GAFVD+ ++G + +++++ +R+K PS+ +++ E+ K++K Sbjct: 433 HKVGDVVKGKVKKLIEKGAFVDITDEIEGFIPVSEISKERIKIPSDKLSLHQEVEAKIIK 492 Query: 248 FDRERTRVSLGLKQLGED 265 D + +++L +KQL D Sbjct: 493 IDTQNKKITLSIKQLILD 510 >UniRef50_Q1NY10 RNA binding S1 n=3 Tax=Deltaproteobacteria RepID=Q1NY10_9DELT Length = 410 Score = 324 bits (830), Expect = 6e-87, Method: Composition-based stats. Identities = 119/342 (34%), Positives = 191/342 (55%), Gaps = 5/342 (1%) Query: 5 FAQLFE-ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQ 63 FA+LFE E + + PG ++ VV + ++ + +D G KSE ++ +F + +G + Sbjct: 4 FAELFEQEGVGGQQLEPGRKIKARVVEVGREWIFIDLGGKSEGSVAKAEFTDPEGNCTVA 63 Query: 64 VGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVE 123 GDE++V A + K A LE+A+ V G + + KGGF + Sbjct: 64 AGDELEVFFLADKKNEKIF---TTKVGGAAAQAHLEEAFHGKVPVEGTVESETKGGFLIR 120 Query: 124 LNGI-RAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 + G RAF P S +D+R + G+ F +++ + N+++SRR ++E E + Sbjct: 121 IGGSSRAFCPYSQMDLRRAANPEEYLGQSFSFLIMEFREGGKNILLSRRQLLEQERQELK 180 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 +QL ++L+ G V G V ++ D+GAFVD+GG++GL+ I+++ W RV+ + G ++ Sbjct: 181 EQLRQSLKVGDLVTGTVTSVRDFGAFVDIGGIEGLIPISEIGWGRVEDIHSHLEPGRQVE 240 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 V V D E+ R SL LK DPW A +PEG+ GRV LTD+G FV + GV+G Sbjct: 241 VAVKSLDWEKDRYSLSLKDTLPDPWEQAAVSFPEGSTQRGRVARLTDFGAFVTLAPGVDG 300 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISL 344 LVH+S++ + HP +VV VGD +EV V +D E++RISL Sbjct: 301 LVHISKLGAGRRLNHPREVVQVGDELEVRVEAVDVEQKRISL 342 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 89/350 (25%), Positives = 156/350 (44%), Gaps = 16/350 (4%) Query: 187 ENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSEIVNVGDEITVKV 245 + L+ G ++K V + F+DLGG +G + + + V GDE+ V Sbjct: 16 QQLEPGRKIKARVVEVGREWIFIDLGGKSEGSVAKAEFTD---PEGNCTVAAGDELEVFF 72 Query: 246 LKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVH 305 L D++ ++ K G + + + + G V + T G + I Sbjct: 73 LA-DKKNEKI-FTTKVGGAAAQAHLEEAFHGKVPVEGTVESETKGGFLIRIGGSSRAFCP 130 Query: 306 VSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETH---- 361 S+MD + +P + + G ++++ E + I L +Q Q+ E Sbjct: 131 YSQMDL-RRAANPEEYL--GQSFSFLIMEFREGGKNILLSRRQLLEQERQELKEQLRQSL 187 Query: 362 NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQ 421 GD V G + S+ DFG F+ + GGI+GL+ +S+I W E+ + G ++ V Sbjct: 188 KVGDLVTGTVTSVRDFGAFVDI-GGIEGLIPISEIGWGRV-EDIHSHLEPGRQVEVAVKS 245 Query: 422 VDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRAS 481 +D E++R SL +K DP+ +G+ G+V + GA V LA GV+G + S Sbjct: 246 LDWEKDRYSLSLKDTLPDPWEQAAVSFPEGSTQRGRVARLTDFGAFVTLAPGVDGLVHIS 305 Query: 482 EA-SRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDA 530 + + R+ V+ VGDE+E + VD + + ISL+V + E + Sbjct: 306 KLGAGRRLNHPREVVQVGDELEVRVEAVDVEQKRISLAVAPPTGSAEPET 355 Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 90/342 (26%), Positives = 149/342 (43%), Gaps = 29/342 (8%) Query: 102 YEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVR------DTLHLEGKELEFK 155 E + + + ++L G S V + G ELE Sbjct: 18 LEPGRKIKARVVEVGREWIFIDLGG------KSEGSVAKAEFTDPEGNCTVAAGDELEVF 71 Query: 156 VIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGME-VKGIVKNLTDYGAFVDLGGV 214 + D+K + ++ V + A ++ G V+G V++ T G + +GG Sbjct: 72 FL-ADKKNEKIFTTK--VGGAAAQAHLEEAFH----GKVPVEGTVESETKGGFLIRIGGS 124 Query: 215 -DGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDP----WVA 269 + M +R +P E + G + +++F + L +QL E Sbjct: 125 SRAFCPYSQMDLRRAANPEEYL--GQSFSFLIMEFREGGKNILLSRRQLLEQERQELKEQ 182 Query: 270 IAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVE 329 + + G +TG VT++ D+G FV+I G+EGL+ +SE+ W + + G VE Sbjct: 183 LRQSLKVGDLVTGTVTSVRDFGAFVDIG-GIEGLIPISEIGWG-RVEDIHSHLEPGRQVE 240 Query: 330 VMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDG 389 V V +D E+ R SL LK +PW+Q A + +G G++ +TDFG F+ L G+DG Sbjct: 241 VAVKSLDWEKDRYSLSLKDTLPDPWEQAAVSFPEGSTQRGRVARLTDFGAFVTLAPGVDG 300 Query: 390 LVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISL 431 LVH+S + + GDE+ V VD E++RISL Sbjct: 301 LVHISKLGAGRRLNHPREVVQVGDELEVRVEAVDVEQKRISL 342 Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 57/179 (31%), Gaps = 8/179 (4%) Query: 359 ETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAV 418 + G +++ ++ + IFI L G +G V ++ + E GDE+ Sbjct: 16 QQLEPGRKIKARVVEVGREWIFIDLGGKSEGSVAKAEFT----DPEGNCTVAAGDELEVF 71 Query: 419 VLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYL 478 L D + E+I K + V G V + G + + + Sbjct: 72 FLA-DKKNEKI-FTTKVGGAAAQAHLEEAFHGKVPVEGTVESETKGGFLIRIGGSSRAFC 129 Query: 479 RASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQ 537 S+ R + L G + I LS R E + ++ + + Sbjct: 130 PYSQMDLRRAANPEEYL--GQSFSFLIMEFREGGKNILLSRRQLLEQERQELKEQLRQS 186 >UniRef50_P50889 40S ribosomal protein S1 n=37 Tax=Bacilli RepID=RS1_LEULA Length = 429 Score = 323 bits (829), Expect = 8e-87, Method: Composition-based stats. Identities = 126/366 (34%), Positives = 212/366 (57%), Gaps = 15/366 (4%) Query: 1 MTE---SFAQLFEESLKEIETRPGSIVRGVVVAID-KDVVLVDAGLKSESAIPAEQFKNA 56 M+E F E + +I + G +V G ++AID + +V E +PA ++ + Sbjct: 34 MSETNNEFLAALESAADQI--KVGDVVTGELLAIDNDNQAVVGLSTGEEGVVPAREYSDD 91 Query: 57 QG---ELEIQVGDEVDVALDA--VEDGFGE-TLLSREKAKRHEAWITLEKAYEDAETVTG 110 + E+++GD ++ + + D G LLS+++ +AW L ++ + +TV Sbjct: 92 RNINLADELKIGDTIEAVVISNVTSDKEGVAYLLSKKRLDARKAWENL--SFAEGDTVDA 149 Query: 111 VINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSR 170 + V+GG V++NG+R F+P S+V R V D + K+++ +VI++D +++SR Sbjct: 150 KVINAVRGGLIVDVNGVRGFVPASMVAERFVSDLNQFKNKDIKAQVIEIDPANARLILSR 209 Query: 171 RAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKH 230 +AV E +A+ ++ L G V+G V LTD+GAFVDLGGVDGL+H+++++ RVK+ Sbjct: 210 KAVAAQELAAQLAEVFSKLSVGEVVEGTVARLTDFGAFVDLGGVDGLVHVSEISHDRVKN 269 Query: 231 PSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDY 290 P++++ GD++ VK+L D E+ R+SL +K PW A + G+ L G V + D+ Sbjct: 270 PADVLTKGDKVDVKILALDTEKGRISLSIKATQRGPWDEAADQIAAGSVLEGTVKRVKDF 329 Query: 291 GCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCK 350 G FVEI G+EGLVHVS++ + +PS+V+ GD V+V VLDI RISL +K + Sbjct: 330 GAFVEILPGIEGLVHVSQIS-NKRIENPSEVLKSGDKVQVKVLDIKPAEERISLSMKALE 388 Query: 351 ANPWQQ 356 P ++ Sbjct: 389 EKPERE 394 Score = 251 bits (640), Expect = 7e-65, Method: Composition-based stats. Identities = 103/399 (25%), Positives = 180/399 (45%), Gaps = 27/399 (6%) Query: 175 ESENSAERDQLLENLQEGMEVKGIVKNLTDYG-AFVDLG-GVDGLLHITDMAWKRVKHPS 232 +E A + + ++ G V G + + + A V L G +G++ + + R + + Sbjct: 38 NNEFLAALESAADQIKVGDVVTGELLAIDNDNQAVVGLSTGEEGVVPAREYSDDRNINLA 97 Query: 233 EIVNVGDEITVKVLK---FDRERTRVSLGLKQLGED-PWVAIAKRYPEGTKLTGRVTNLT 288 + + +GD I V+ D+E L K+L W ++ + EG + +V N Sbjct: 98 DELKIGDTIEAVVISNVTSDKEGVAYLLSKKRLDARKAWENLS--FAEGDTVDAKVINAV 155 Query: 289 DYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQ 348 G V++ GV G V S M ++ ++ V++ID R+ L K Sbjct: 156 RGGLIVDV-NGVRGFVPAS-MVAERFVSDLNQF--KNKDIKAQVIEIDPANARLILSRKA 211 Query: 349 CKANPWQQFA----ETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEE 404 A + G+ VEG + +TDFG F+ L GG+DGLVH+S+IS + + Sbjct: 212 VAAQELAAQLAEVFSKLSVGEVVEGTVARLTDFGAFVDL-GGVDGLVHVSEISHDRV-KN 269 Query: 405 AVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAK 464 KGD++ +L +D E+ RISL +K P++ G+++ G V V Sbjct: 270 PADVLTKGDKVDVKILALDTEKGRISLSIKATQRGPWDEAADQIAAGSVLEGTVKRVKDF 329 Query: 465 GATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDE 524 GA VE+ G+EG + S+ S R+E+ + VL GD+V+ K + ISLS++A +E Sbjct: 330 GAFVEILPGIEGLVHVSQISNKRIENPSEVLKSGDKVQVKVLDIKPAEERISLSMKALEE 389 Query: 525 ADEKD---------AIATVNKQEDANFSNNAMAEAFKAA 554 E++ + A + + + S + + F Sbjct: 390 KPEREDRRGNDGSASRADIAAYKQQDDSAATLGDIFGDK 428 >UniRef50_C7H149 4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H149_9FIRM Length = 703 Score = 321 bits (823), Expect = 5e-86, Method: Composition-based stats. Identities = 127/357 (35%), Positives = 205/357 (57%), Gaps = 5/357 (1%) Query: 3 ESFAQLFEESLKEIE-TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE-- 59 +L +E K ++ + G IV GV+ AI+ ++V+ G K + IP + +G+ Sbjct: 303 NEMLELMDEIEKSMKSPKTGEIVEGVIDAINDKEIVVNLGCKKDGIIPNSEVALEEGQTI 362 Query: 60 -LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 VGDE+ + +DG G LLSR K + W LE A + ETV + VK Sbjct: 363 RDLFSVGDEIQAKVLKTDDGDGSILLSRRKMEASVHWAELEDALNNDETVKVDVVRAVKS 422 Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 G + F+P S + R + D G+ +E KVI++DQK + S + + + E Sbjct: 423 GVIANYKEVSGFIPLSQLSERFIEDASEFVGQTMEAKVIRVDQKLGKAIFSPKQLQKEEK 482 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVG 238 + +L + L G +++G V T+YGAFVD+GGVDGLLHI++++W ++KHPSE++ VG Sbjct: 483 NKRLQELWKKLNVGDDIEGKVMRFTEYGAFVDIGGVDGLLHISEISWGKLKHPSEVLTVG 542 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE 298 D I VK+L + E+ ++SLG KQ +PW I +Y G + G + + +YG F+E+E Sbjct: 543 DTINVKILSLNPEKGKISLGYKQNMPEPWSIIDDKYKAGDNVEGDIVQIKEYGAFLELEP 602 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQ 355 G++GL+H+SE+ + + + + V+++GD VE +L+ID++RRRISL +K P Q Sbjct: 603 GLDGLIHISEISHS-RVENINSVLHIGDNVEAKILEIDKDRRRISLSIKALIDPPEQ 658 Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats. Identities = 101/358 (28%), Positives = 176/358 (49%), Gaps = 12/358 (3%) Query: 177 ENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIV 235 E E ++ +++ + G V+G++ + D V+LG DG++ +++A + + ++ Sbjct: 307 ELMDEIEKSMKSPKTGEIVEGVIDAINDKEIVVNLGCKKDGIIPNSEVALEEGQTIRDLF 366 Query: 236 NVGDEITVKVLKFDRERTRVSLGLKQLGED-PWVAIAKRYPEGTKLTGRVTNLTDYGCFV 294 +VGDEI KVLK D + L +++ W + + V G Sbjct: 367 SVGDEIQAKVLKTDDGDGSILLSRRKMEASVHWAELEDALNNDETVKVDVVRAVKSGVIA 426 Query: 295 EIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPW 354 +E V G + +S++ S+ V G +E V+ +D++ + KQ + Sbjct: 427 NYKE-VSGFIPLSQLS-ERFIEDASEFV--GQTMEAKVIRVDQKLGKAIFSPKQLQKEEK 482 Query: 355 QQF----AETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYK 410 + + N GD +EGK+ T++G F+ + GG+DGL+H+S+ISW + Sbjct: 483 NKRLQELWKKLNVGDDIEGKVMRFTEYGAFVDI-GGVDGLLHISEISWGKL-KHPSEVLT 540 Query: 411 KGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVEL 470 GD I +L ++ E+ +ISLG KQ +P++ K G V G + + GA +EL Sbjct: 541 VGDTINVKILSLNPEKGKISLGYKQNMPEPWSIIDDKYKAGDNVEGDIVQIKEYGAFLEL 600 Query: 471 ADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEK 528 G++G + SE S RVE+ VL +GD VEAK +D+ R ISLS++A + E+ Sbjct: 601 EPGLDGLIHISEISHSRVENINSVLHIGDNVEAKILEIDKDRRRISLSIKALIDPPEQ 658 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 58/282 (20%), Positives = 111/282 (39%), Gaps = 11/282 (3%) Query: 265 DPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNV 324 D K G + G + + D V + +G++ SE+ + + +V Sbjct: 310 DEIEKSMKSPKTGEIVEGVIDAINDKEIVVNLGCKKDGIIPNSEVALE-EGQTIRDLFSV 368 Query: 325 GDVVEVMVLDIDEERRRISLGLKQCKAN-PWQQFAETHNKGDRVEGKIKSITDFGIFIGL 383 GD ++ VL D+ I L ++ +A+ W + + N + V+ + G+ Sbjct: 369 GDEIQAKVLKTDDGDGSILLSRRKMEASVHWAELEDALNNDETVKVDVVRAVKSGVIANY 428 Query: 384 DGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNN 443 + G + LS +S + + G + A V++VD + + KQL ++ N Sbjct: 429 KE-VSGFIPLSQLSERFIEDASEF---VGQTMEAKVIRVDQKLGKAIFSPKQLQKEEKNK 484 Query: 444 WV----ALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGD 499 + G + GKV GA V++ GV+G L SE S +++ + VL+VGD Sbjct: 485 RLQELWKKLNVGDDIEGKVMRFTEYGAFVDIG-GVDGLLHISEISWGKLKHPSEVLTVGD 543 Query: 500 EVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDAN 541 + K ++ + ISL + ++ Sbjct: 544 TINVKILSLNPEKGKISLGYKQNMPEPWSIIDDKYKAGDNVE 585 >UniRef50_C8R0E8 RNA binding S1 domain protein n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R0E8_9DELT Length = 417 Score = 321 bits (822), Expect = 5e-86, Method: Composition-based stats. Identities = 120/344 (34%), Positives = 193/344 (56%), Gaps = 5/344 (1%) Query: 5 FAQLFEESLKEIE-TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQ 63 F +LF E E PG + VV+I ++ + +D G KSE A+ +F + +G + Sbjct: 4 FEELFAEHEAAGEKLTPGQQITAEVVSIAREWIFIDLGGKSEGAVAKAEFIDQEGNCTVA 63 Query: 64 VGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVE 123 VGD+V V A + L K LE+AY V G + + KGGF V Sbjct: 64 VGDKVTVYFLAEKKQEK---LFTTKVGGAATQAHLEEAYHSGIPVEGTVEAEGKGGFQVR 120 Query: 124 LNG-IRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 ++G +RAF P S + +R V + G+ FK+I+ + N+++SRR ++E E +A + Sbjct: 121 ISGNVRAFCPFSQMALRRVENNEEYLGQGFAFKIIEFREGGRNIILSRRRLLEEERAARK 180 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 ++L ++L G +V G V ++ +GAFVD+GG++GL+ ++++ W V+ + G E+ Sbjct: 181 EELRQSLAVGDKVTGTVTSVQKFGAFVDIGGIEGLIPMSEIGWGTVEDIHSHLEPGREVE 240 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 V V D E+ R SL LK DPW +A R+PEG++ G+V L D+G FV + G++G Sbjct: 241 VVVKSLDWEKERYSLSLKDTLPDPWEGVAARFPEGSRHQGKVARLMDFGAFVTLAPGIDG 300 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGL 346 LVH+S++ + HP +VV G+ +EV + ID ERRR+SL + Sbjct: 301 LVHISKLGAGRRINHPREVVQPGETLEVEIEAIDSERRRLSLSV 344 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 91/357 (25%), Positives = 155/357 (43%), Gaps = 16/357 (4%) Query: 176 SENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSEI 234 E AE + E L G ++ V ++ F+DLGG +G + + + + Sbjct: 5 EELFAEHEAAGEKLTPGQQITAEVVSIAREWIFIDLGGKSEGAVAKAEFID---QEGNCT 61 Query: 235 VNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFV 294 V VGD++TV L ++ K G + + Y G + G V G V Sbjct: 62 VAVGDKVTVYFLA--EKKQEKLFTTKVGGAATQAHLEEAYHSGIPVEGTVEAEGKGGFQV 119 Query: 295 EIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPW 354 I V S+M + + + + G +++ E R I L ++ Sbjct: 120 RISGNVRAFCPFSQMAL-RRVENNEEYL--GQGFAFKIIEFREGGRNIILSRRRLLEEER 176 Query: 355 QQFA----ETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYK 410 ++ GD+V G + S+ FG F+ + GGI+GL+ +S+I W E+ + Sbjct: 177 AARKEELRQSLAVGDKVTGTVTSVQKFGAFVDI-GGIEGLIPMSEIGWGTV-EDIHSHLE 234 Query: 411 KGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVEL 470 G E+ VV +D E+ER SL +K DP+ A +G+ GKV + GA V L Sbjct: 235 PGREVEVVVKSLDWEKERYSLSLKDTLPDPWEGVAARFPEGSRHQGKVARLMDFGAFVTL 294 Query: 471 ADGVEGYLRASEA-SRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEAD 526 A G++G + S+ + R+ V+ G+ +E + +D + R +SLSV E++ Sbjct: 295 APGIDGLVHISKLGAGRRINHPREVVQPGETLEVEIEAIDSERRRLSLSVPPPAESE 351 Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats. Identities = 87/299 (29%), Positives = 147/299 (49%), Gaps = 17/299 (5%) Query: 148 EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGA 207 G ++ + ++K+ + ++ +A + L E G+ V+G V+ G Sbjct: 64 VGDKVTVYFL-AEKKQEKLFTTK-----VGGAATQAHLEEAYHSGIPVEGTVEAEGKGGF 117 Query: 208 FVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDP 266 V + G V + MA +RV++ E + G K+++F + L ++L E+ Sbjct: 118 QVRISGNVRAFCPFSQMALRRVENNEEYL--GQGFAFKIIEFREGGRNIILSRRRLLEEE 175 Query: 267 WVA----IAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDW-TNKNIHPSKV 321 A + + G K+TG VT++ +G FV+I G+EGL+ +SE+ W T ++IH Sbjct: 176 RAARKEELRQSLAVGDKVTGTVTSVQKFGAFVDIG-GIEGLIPMSEIGWGTVEDIHSH-- 232 Query: 322 VNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFI 381 + G VEV+V +D E+ R SL LK +PW+ A +G R +GK+ + DFG F+ Sbjct: 233 LEPGREVEVVVKSLDWEKERYSLSLKDTLPDPWEGVAARFPEGSRHQGKVARLMDFGAFV 292 Query: 382 GLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDP 440 L GIDGLVH+S + + G+ + + +D+ER R+SL V AE Sbjct: 293 TLAPGIDGLVHISKLGAGRRINHPREVVQPGETLEVEIEAIDSERRRLSLSVPPPAESE 351 >UniRef50_A2ID48 RpsA n=1 Tax=Pasteuria ramosa RepID=A2ID48_9BACL Length = 392 Score = 319 bits (817), Expect = 2e-85, Method: Composition-based stats. Identities = 123/359 (34%), Positives = 204/359 (56%), Gaps = 5/359 (1%) Query: 8 LFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL---EIQV 64 + EE I GS+V G V IDK+ L+ E+ +P + + +++ Sbjct: 1 MSEEMNSTIPFEIGSLVTGSVTKIDKNQALIKIAEDIEAILPISELSCLRINEVGDMLKL 60 Query: 65 GDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL 124 DE+++ + +++ + +LS+ +AW L+ YE+ E + ++ VKGG ++L Sbjct: 61 DDELELEVLRLDEEENKFILSKRAVDAKKAWPFLQHKYENNENIEAKVSDVVKGGLVIDL 120 Query: 125 NGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQ 184 G+R F+P SLV+ V D + + + K+ ++DQ N +++S RAV E +R+ Sbjct: 121 -GVRGFVPASLVECHYVEDFSDYKDRVITMKIAEIDQDSNKLILSCRAVHEEAAQHQREA 179 Query: 185 LLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 N++ G V GIV+ LTD+GAFVD+G VDGL+HI+ ++W+RV HPS+++N+GDE+ K Sbjct: 180 TFNNIEIGSVVDGIVRRLTDFGAFVDVGAVDGLVHISQISWQRVNHPSDVLNIGDEVKCK 239 Query: 245 VLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLV 304 VLKFDRE R+SL ++ PW + + E + G V L +G FVEI GVEGL+ Sbjct: 240 VLKFDRESGRISLSIRDTQPGPWSGVEDQLVENDIVKGVVKRLVSFGAFVEILPGVEGLM 299 Query: 305 HVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNK 363 H+SE+ + PS+++ G + V +L++D RR+SL + + N Q+ + NK Sbjct: 300 HISEISH-RHIVTPSEILKEGQEILVKILNVDSNARRVSLTMCDVEQNTSQKSENSSNK 357 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 88/357 (24%), Positives = 163/357 (45%), Gaps = 17/357 (4%) Query: 189 LQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLK 247 + G V G V + A + + ++ +L I++++ R+ +++ + DE+ ++VL+ Sbjct: 11 FEIGSLVTGSVTKIDKNQALIKIAEDIEAILPISELSCLRINEVGDMLKLDDELELEVLR 70 Query: 248 FDRERTRVSLGLKQL-GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHV 306 D E + L + + + W + +Y + +V+++ G +++ GV G V Sbjct: 71 LDEEENKFILSKRAVDAKKAWPFLQHKYENNENIEAKVSDVVKGGLVIDL--GVRGFVPA 128 Query: 307 S--EMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAE----T 360 S E + V + + + +ID++ ++ L + Q E Sbjct: 129 SLVECHYVEDFSDYKDRV-----ITMKIAEIDQDSNKLILSCRAVHEEAAQHQREATFNN 183 Query: 361 HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL 420 G V+G ++ +TDFG F+ + G +DGLVH+S ISW GDE+ VL Sbjct: 184 IEIGSVVDGIVRRLTDFGAFVDV-GAVDGLVHISQISWQRVN-HPSDVLNIGDEVKCKVL 241 Query: 421 QVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRA 480 + D E RISL ++ P++ + IV G V + + GA VE+ GVEG + Sbjct: 242 KFDRESGRISLSIRDTQPGPWSGVEDQLVENDIVKGVVKRLVSFGAFVEILPGVEGLMHI 301 Query: 481 SEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQ 537 SE S + + +L G E+ K VD R +SL++ ++ + + + NKQ Sbjct: 302 SEISHRHIVTPSEILKEGQEILVKILNVDSNARRVSLTMCDVEQNTSQKSENSSNKQ 358 >UniRef50_B0MQU3 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B0MQU3_9FIRM Length = 658 Score = 318 bits (816), Expect = 3e-85, Method: Composition-based stats. Identities = 124/350 (35%), Positives = 202/350 (57%), Gaps = 6/350 (1%) Query: 4 SFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK---NAQGEL 60 F +++ K++ G+ V+ +VVA++K+ +VD G K IPA + NA Sbjct: 297 DFMAEVDKTFKKVYI--GNRVKALVVAVNKNEAVVDLGTKHSGYIPASELSQDPNAAPSD 354 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 ++VGDE++ + AV D G LS++K L A E+ ET+ G ++ VKGG Sbjct: 355 VVKVGDEIEAIVTAVNDAEGTVTLSKKKVDSVLGVEKLAAAMENNETLEGEVSSVVKGGV 414 Query: 121 TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 + NG R F+P S V L K + FKVI++ + R VV S R + N A Sbjct: 415 IIISNGTRVFIPASQTGVPKDGKLEELLKKTVPFKVIEVTEARGRVVGSIRQAKKEANDA 474 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 + + EN++ G + G VK++ YG FVDLGGVDG++H +++ W R+KHP EIV +GD+ Sbjct: 475 AKAKFWENIEVGQKFTGEVKSIESYGVFVDLGGVDGMVHSSELTWNRIKHPREIVKIGDK 534 Query: 241 ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV 300 + V V FD E+ RVSLG K+ ++PW Y EG + + ++T +G F +I GV Sbjct: 535 LDVYVKSFDPEKKRVSLGCKKEEDNPWNKFVAEYSEGDVVDVTIVSITPFGAFAQIIPGV 594 Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCK 350 +GL+H+S++ T + + ++V+++GD V+ +++I+EE+ R+SL ++ K Sbjct: 595 DGLIHISQIS-TERINNVAQVLSIGDEVKAKIIEINEEQNRVSLSIRALK 643 Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 99/350 (28%), Positives = 175/350 (50%), Gaps = 12/350 (3%) Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVG 238 AE D+ + + G VK +V + A VDLG G + ++++ PS++V VG Sbjct: 300 AEVDKTFKKVYIGNRVKALVVAVNKNEAVVDLGTKHSGYIPASELSQDPNAAPSDVVKVG 359 Query: 239 DEITVKVLKFDRERTRVSLGLKQL-GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE 297 DEI V + V+L K++ +A L G V+++ G + I Sbjct: 360 DEIEAIVTAVNDAEGTVTLSKKKVDSVLGVEKLAAAMENNETLEGEVSSVVKGGVII-IS 418 Query: 298 EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQ-- 355 G + S+ K+ +++ V V+++ E R R+ ++Q K Sbjct: 419 NGTRVFIPASQ-TGVPKDGKLEELLK--KTVPFKVIEVTEARGRVVGSIRQAKKEANDAA 475 Query: 356 --QFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGD 413 +F E G + G++KSI +G+F+ L GG+DG+VH S+++WN + K GD Sbjct: 476 KAKFWENIEVGQKFTGEVKSIESYGVFVDL-GGVDGMVHSSELTWNRI-KHPREIVKIGD 533 Query: 414 EIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADG 473 ++ V D E++R+SLG K+ ++P+N +VA +G +V + ++ GA ++ G Sbjct: 534 KLDVYVKSFDPEKKRVSLGCKKEEDNPWNKFVAEYSEGDVVDVTIVSITPFGAFAQIIPG 593 Query: 474 VEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKD 523 V+G + S+ S +R+ + VLS+GDEV+AK ++ + +SLS+RA Sbjct: 594 VDGLIHISQISTERINNVAQVLSIGDEVKAKIIEINEEQNRVSLSIRALK 643 Score = 147 bits (372), Expect = 8e-34, Method: Composition-based stats. Identities = 53/285 (18%), Positives = 127/285 (44%), Gaps = 11/285 (3%) Query: 268 VAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDV 327 K+ G ++ V + V++ G + SE+ + N PS VV VGD Sbjct: 303 DKTFKKVYIGNRVKALVVAVNKNEAVVDLGTKHSGYIPASELS-QDPNAAPSDVVKVGDE 361 Query: 328 VEVMVLDIDEERRRISLGLKQCKAN-PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGG 386 +E +V +++ ++L K+ + ++ A + +EG++ S+ G+ I + G Sbjct: 362 IEAIVTAVNDAEGTVTLSKKKVDSVLGVEKLAAAMENNETLEGEVSSVVKGGVII-ISNG 420 Query: 387 IDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDP----FN 442 + S + + KK + V++V R R+ ++Q ++ Sbjct: 421 TRVFIPASQ-TGVPKDGKLEELLKK--TVPFKVIEVTEARGRVVGSIRQAKKEANDAAKA 477 Query: 443 NWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVE 502 + + G TG+V ++++ G V+L GV+G + +SE + +R++ ++ +GD+++ Sbjct: 478 KFWENIEVGQKFTGEVKSIESYGVFVDLG-GVDGMVHSSELTWNRIKHPREIVKIGDKLD 536 Query: 503 AKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAM 547 D + + +SL + +++ +A ++ + + + ++ Sbjct: 537 VYVKSFDPEKKRVSLGCKKEEDNPWNKFVAEYSEGDVVDVTIVSI 581 >UniRef50_D1AVV2 RNA binding S1 domain protein n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AVV2_STRM9 Length = 514 Score = 315 bits (807), Expect = 3e-84, Method: Composition-based stats. Identities = 138/520 (26%), Positives = 259/520 (49%), Gaps = 32/520 (6%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL 60 M +F ++ EE L E G + G ++ D + ++ K E I + + Sbjct: 1 MNNNFMEMLEEYLPTKEQNLGDKIEGTIIRKDNEFGYLNIQNKLEGRIRVSEIEG----- 55 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 ++GD+V V + D F ++S+ ++ EA+ + + + ++G+I K+KGG+ Sbjct: 56 -FEIGDKVKVLVVKENDEF--LIVSKNILEKKEAFSNI----KKGDKISGIIKEKIKGGY 108 Query: 121 TVELNGIRAFLPG--SLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 VE I+AFLP S ++ + + + G+ LEF V + ++K +V+SR +I+ Sbjct: 109 KVECGLIKAFLPFRSSGLNQQYIPN-----GELLEFDVTEKNRKE--IVISRLEIIKENE 161 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVG 238 L L G ++ G + N DYG +DLG + GLLH ++++W + K + VG Sbjct: 162 K----NFLNKLNLGDKITGTISNKLDYGMIIDLGTLSGLLHSSEISWNKEKTLKD-FTVG 216 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE 298 ++I VK+++ D+E ++ L +KQL E+PW+ I ++Y G + V + +G V++ + Sbjct: 217 EKIDVKIIELDKETKKIKLSIKQLVENPWLKIREKYHIGQNIDAPVKEVFSFGVVVDLGD 276 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFA 358 E L+HVS++ + K + K GDV+ V+DI++E+ +I L + W+ Sbjct: 277 -REDLIHVSDL-YYKKIGNVEKEYKKGDVIFCEVIDINDEKEKIILSARTVFEKIWESLD 334 Query: 359 ETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAV 418 + D + K+ + DFG F D ++ V S+ SWN A + K GD + Sbjct: 335 DFCLLNDIINIKVTRVKDFGFFAKTDENLEIFVPKSEYSWNKADDL---NIKVGDSLDVK 391 Query: 419 VLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYL 478 ++++ E + + +K+L + P++ + K ++T + G V L D +G + Sbjct: 392 LIEIKKEDKNLVGSIKRLGKSPYDIASSKFDKNTEYEVEITDILENGVLVRLTDDFKGLI 451 Query: 479 RASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLS 518 E S++ ++D +VGD+++A + KN I LS Sbjct: 452 PKKELSKEEIKDIKEHFNVGDKIKAVVFDKNNKNS-ILLS 490 Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats. Identities = 96/446 (21%), Positives = 208/446 (46%), Gaps = 31/446 (6%) Query: 105 AETVTGVINGK-VKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKR 163 + + G I K + G+ N + + S ++ G +++ V+K + + Sbjct: 21 GDKIEGTIIRKDNEFGYLNIQNKLEGRIRVSEIE-------GFEIGDKVKVLVVKENDE- 72 Query: 164 NNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDM 223 +I S+N E+ + N+++G ++ GI+K G V+ G + L Sbjct: 73 --------FLIVSKNILEKKEAFSNIKKGDKISGIIKEKIKGGYKVECGLIKAFLP---- 120 Query: 224 AWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGR 283 ++ + + G+ + V + + R + + ++ ++ + G K+TG Sbjct: 121 -FRSSGLNQQYIPNGELLEFDVTE--KNRKEIVISRLEIIKENEKNFLNKLNLGDKITGT 177 Query: 284 VTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRIS 343 ++N DYG +++ + GL+H SE+ W + K VG+ ++V ++++D+E ++I Sbjct: 178 ISNKLDYGMIIDLG-TLSGLLHSSEISWNKE--KTLKDFTVGEKIDVKIIELDKETKKIK 234 Query: 344 LGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGE 403 L +KQ NPW + E ++ G ++ +K + FG+ + L G + L+H+SD+ + G Sbjct: 235 LSIKQLVENPWLKIREKYHIGQNIDAPVKEVFSFGVVVDL-GDREDLIHVSDLYYKKIG- 292 Query: 404 EAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDA 463 +EYKKGD I V+ ++ E+E+I L + + E + + I+ KVT V Sbjct: 293 NVEKEYKKGDVIFCEVIDINDEKEKIILSARTVFEKIWESLDDFCLLNDIINIKVTRVKD 352 Query: 464 KGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKD 523 G + + +E ++ SE S ++ +D + VGD ++ K + ++++ + S++ Sbjct: 353 FGFFAKTDENLEIFVPKSEYSWNKADDLN--IKVGDSLDVKLIEIKKEDKNLVGSIKRLG 410 Query: 524 EADEKDAIATVNKQEDANFSNNAMAE 549 ++ A + +K + + E Sbjct: 411 KSPYDIASSKFDKNTEYEVEITDILE 436 >UniRef50_C1ZHL8 Ribosomal protein S1 n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZHL8_PLALI Length = 557 Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats. Identities = 114/343 (33%), Positives = 186/343 (54%), Gaps = 10/343 (2%) Query: 14 KEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALD 73 E + PG ++ V ++ + VD G +S +P N G+E V ++ Sbjct: 176 SEDQLAPGMKLKAKVQSVSPENTFVDLGFRSPGMLPTR---NFPQGKPPHPGEEHLVIVE 232 Query: 74 AVEDGFGETLLSREKAKRHE--AWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFL 131 + G ++ K+ R W L+ + V + KGG V + IRAFL Sbjct: 233 KYDAEQGLIYVNLTKSTRRARGNWDELQ----KGQIVEAYVTAVNKGGLEVAVGQIRAFL 288 Query: 132 PGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQE 191 P S V++ V GK+ +V +++ + N+VVSR+A++ +E + ++ Sbjct: 289 PASQVELGFVSSMDAFVGKKFPVEVTEVNPAKRNLVVSRKAILIAERKEAAASFWDKVEV 348 Query: 192 GMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRE 251 G + G +K + DYGAFVDLGGVDG LH+ +M+W R+KHP++ V + V VL DRE Sbjct: 349 GQKFTGTIKTIKDYGAFVDLGGVDGFLHVGEMSWTRIKHPTDCVREQQTVDVVVLSLDRE 408 Query: 252 RTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDW 311 + ++ LG++QL ++PW + + Y G +TG+VT +TD+G F+E+E GVEG++H+SE+D+ Sbjct: 409 KQKIGLGMRQLVQNPWNSAPETYAVGKTVTGKVTRITDFGAFIELEPGVEGMIHISELDY 468 Query: 312 TNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPW 354 + + V+ G V+ VL+I ER+RISL +K K P Sbjct: 469 -KRVKRVADVLKEGQQVDAQVLEIQPERQRISLSVKALKPKPE 510 Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 94/346 (27%), Positives = 164/346 (47%), Gaps = 18/346 (5%) Query: 187 ENLQEGMEVKGIVKNLTDYGAFVDLGGVD-GLLHITDMAWKRVKHPSEIVNVGDEITVKV 245 + L GM++K V++++ FVDLG G+L + + HP G+E V V Sbjct: 178 DQLAPGMKLKAKVQSVSPENTFVDLGFRSPGMLPTRNFPQGKPPHP------GEEHLVIV 231 Query: 246 LKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVH 305 K+D E+ + + L + + G + VT + G V + + + + Sbjct: 232 EKYDAEQGLIYVNLTKSTRRARGNWDELQK-GQIVEAYVTAVNKGGLEVAVGQ-IRAFLP 289 Query: 306 VSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC----KANPWQQFAETH 361 S+++ + + V G V V +++ +R + + K + F + Sbjct: 290 ASQVELGFVSSMDAFV---GKKFPVEVTEVNPAKRNLVVSRKAILIAERKEAAASFWDKV 346 Query: 362 NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQ 421 G + G IK+I D+G F+ L GG+DG +H+ ++SW + ++ + VVL Sbjct: 347 EVGQKFTGTIKTIKDYGAFVDL-GGVDGFLHVGEMSWTRI-KHPTDCVREQQTVDVVVLS 404 Query: 422 VDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRAS 481 +D E+++I LG++QL ++P+N+ G VTGKVT + GA +EL GVEG + S Sbjct: 405 LDREKQKIGLGMRQLVQNPWNSAPETYAVGKTVTGKVTRITDFGAFIELEPGVEGMIHIS 464 Query: 482 EASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADE 527 E RV+ VL G +V+A+ + + + ISLSV+A E Sbjct: 465 ELDYKRVKRVADVLKEGQQVDAQVLEIQPERQRISLSVKALKPKPE 510 Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats. Identities = 53/271 (19%), Positives = 106/271 (39%), Gaps = 17/271 (6%) Query: 268 VAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDV 327 + + G KL +V +++ FV++ G++ K HP G+ Sbjct: 174 ITSEDQLAPGMKLKAKVQSVSPENTFVDLGFRSPGMLPTRNFPQG-KPPHP------GEE 226 Query: 328 VEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGI 387 V+V D E+ I + L + + E KG VE + ++ G+ + + G I Sbjct: 227 HLVIVEKYDAEQGLIYVNLTKSTRRARGNWDE-LQKGQIVEAYVTAVNKGGLEVAV-GQI 284 Query: 388 DGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLA----EDPFNN 443 + S + ++ + G + V +V+ + + + K + ++ + Sbjct: 285 RAFLPASQVELGFV--SSMDAF-VGKKFPVEVTEVNPAKRNLVVSRKAILIAERKEAAAS 341 Query: 444 WVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEA 503 + + G TG + + GA V+L GV+G+L E S R++ T + V+ Sbjct: 342 FWDKVEVGQKFTGTIKTIKDYGAFVDLG-GVDGFLHVGEMSWTRIKHPTDCVREQQTVDV 400 Query: 504 KFTGVDRKNRAISLSVRAKDEADEKDAIATV 534 +DR+ + I L +R + A T Sbjct: 401 VVLSLDREKQKIGLGMRQLVQNPWNSAPETY 431 >UniRef50_C6PXA3 RNA binding S1 domain protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PXA3_9CLOT Length = 388 Score = 313 bits (802), Expect = 1e-83, Method: Composition-based stats. Identities = 130/358 (36%), Positives = 218/358 (60%), Gaps = 6/358 (1%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQF-KNAQGEL 60 + F + E S+K I R G +V+G ++++ ++ +V+ G S+ + + +N + L Sbjct: 11 MKEFMEDIESSMKSI--RRGEVVKGKIISVTENHAIVNIGYMSDGILSKSEVVENEEDNL 68 Query: 61 E--IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 ++ +E+ V + + DG G LLS++ A + +AW L+KA+E+ V + VKG Sbjct: 69 SDILKENEEIYVYVLDMNDGEGNVLLSKKAADKIKAWDELKKAFEEKSDVETTVKEVVKG 128 Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 G +NGIRAF+P S + + V D GK L KVI+ D+ + VV+SR+ + ++E Sbjct: 129 GVVTYINGIRAFIPASQLSLSYVEDLKSFIGKTLTVKVIEFDKDKEKVVLSRKVIEKAEA 188 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVG 238 ++ LL +++ G + G+V L +GAFVDLGGVDGL+H+++++WKRV +P+++V+VG Sbjct: 189 EEKKQHLLNSIKPGEKRSGVVSRLAKFGAFVDLGGVDGLIHVSELSWKRVNNPADVVSVG 248 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE 298 D++ V +L D+E +++L LK + E+PW ++ ++ G + G V L +G FVEI+ Sbjct: 249 DKVEVYILSVDKENNKIALALKDVNENPWESVGNKFKIGDVVEGEVLKLASFGAFVEIQP 308 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQ 356 GVEGLVH+SE+ + PS V+N+GD V V +LDID + RISL +K P + Sbjct: 309 GVEGLVHISEIS-EERIAKPSDVLNLGDKVRVKILDIDNKENRISLSIKDAVEKPKED 365 Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats. Identities = 101/383 (26%), Positives = 185/383 (48%), Gaps = 13/383 (3%) Query: 176 SENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSEI 234 E + + +++++ G VKG + ++T+ A V++G + DG+L +++ + S+I Sbjct: 12 KEFMEDIESSMKSIRRGEVVKGKIISVTENHAIVNIGYMSDGILSKSEVVENEEDNLSDI 71 Query: 235 VNVGDEITVKVLKFDRERTRVSLGLKQLGE-DPWVAIAKRYPEGTKLTGRVTNLTDYGCF 293 + +EI V VL + V L K + W + K + E + + V + G Sbjct: 72 LKENEEIYVYVLDMNDGEGNVLLSKKAADKIKAWDELKKAFEEKSDVETTVKEVVKGGVV 131 Query: 294 VEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCK--- 350 I G+ + S++ + S + G + V V++ D+++ ++ L K + Sbjct: 132 TYI-NGIRAFIPASQLSLSYVEDLKSFI---GKTLTVKVIEFDKDKEKVVLSRKVIEKAE 187 Query: 351 -ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREY 409 Q + G++ G + + FG F+ L GG+DGL+H+S++SW Sbjct: 188 AEEKKQHLLNSIKPGEKRSGVVSRLAKFGAFVDL-GGVDGLIHVSELSWKRVN-NPADVV 245 Query: 410 KKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVE 469 GD++ +L VD E +I+L +K + E+P+ + K G +V G+V + + GA VE Sbjct: 246 SVGDKVEVYILSVDKENNKIALALKDVNENPWESVGNKFKIGDVVEGEVLKLASFGAFVE 305 Query: 470 LADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKD 529 + GVEG + SE S +R+ + VL++GD+V K +D K ISLS++ E K+ Sbjct: 306 IQPGVEGLVHISEISEERIAKPSDVLNLGDKVRVKILDIDNKENRISLSIKDAVEKP-KE 364 Query: 530 AIATVNKQEDANFSNNAMAEAFK 552 + N E A S + + FK Sbjct: 365 DLDKFNDNESAGTSLADLLKDFK 387 >UniRef50_A9ESM2 RpsA3 protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9ESM2_SORC5 Length = 683 Score = 313 bits (802), Expect = 1e-83, Method: Composition-based stats. Identities = 132/457 (28%), Positives = 223/457 (48%), Gaps = 20/457 (4%) Query: 21 GSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGFG 80 G V G V I + +D K+ + + +E GD+ + + G Sbjct: 236 GEEVFGKVSKITDHAIWIDIAGKATGLFDRREILEEEPPVE---GDQFIATVASTGVRGG 292 Query: 81 ETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRP 140 LLSR + +A E A + E++ G + G VKGG V+L G+RAF P S VD+R Sbjct: 293 MLLLSRAPVQLDQARARAEAALQSGESIEGFVTGAVKGGLEVDLGGLRAFAPASHVDLRH 352 Query: 141 VRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVK 200 D +L G+ L+F V + +K ++VVSRR ++E E+ R + L +++ G KGIV+ Sbjct: 353 GADLNYLVGQRLDFGVTQFAKKGRDIVVSRRKMLEEESRKARTEALTSIEPGSLHKGIVR 412 Query: 201 NLTDYGAFV---DLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSL 257 + +G FV D GGV+GL+H+++ + R +++ G EI VKVL+ D ++ ++ L Sbjct: 413 KVVAWGVFVALPDAGGVEGLVHMSEASHDRGAKLADLFKPGAEIDVKVLRVD-DKGKLWL 471 Query: 258 GLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIH 317 K DPW A+ ++Y GT+ G+V L +G F+E+E G++GL+H +++ H Sbjct: 472 SRKAATVDPWDAVKEKYAVGTRHKGKVARLQPFGAFIELEPGIDGLIHTADLSM-KPIQH 530 Query: 318 PSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDF 377 P++VV VGD V+V+V D RRI L + + +G V+ + +T+ Sbjct: 531 PNEVVKVGDDVDVVVATCDAAGRRIGL-HPAPPEGEESEPRQRVQQGKAVKVAVTQVTEG 589 Query: 378 GIFIGLDGGI----DGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGV 433 G+ + + G G + + G + +E+ G ++ A +++VD R L + Sbjct: 590 GLVVRVLGTTGRAARGFIPAGH-TGTQRGTDLRKEFPIGTQLDAKIIEVDPRRGEAKLSI 648 Query: 434 KQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVEL 470 + L ED + G V G +L Sbjct: 649 RALKEDAEKQAYQQYRAG------VAREAKFGTFADL 679 Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats. Identities = 111/480 (23%), Positives = 190/480 (39%), Gaps = 24/480 (5%) Query: 86 REKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPV-RDT 144 + + + A+ E V G ++ +++ G +A L D R + + Sbjct: 217 KRRKGQGAPPPRERPAFSIGEEVFGKVSKITDHAIWIDIAG-KA---TGLFDRREILEEE 272 Query: 145 LHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTD 204 +EG + V + +++SR V + A + LQ G ++G V Sbjct: 273 PPVEGDQFIATVASTGVRGGMLLLSRAPVQLDQARARAE---AALQSGESIEGFVTGAVK 329 Query: 205 YGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGE 264 G VDLGG+ + + + + VG + V +F ++ + + +++ E Sbjct: 330 GGLEVDLGGLRAFAPASHVDLRHGADLN--YLVGQRLDFGVTQFAKKGRDIVVSRRKMLE 387 Query: 265 DPW----VAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE--GVEGLVHVSEMDWTNKNIHP 318 + G+ G V + +G FV + + GVEGLVH+SE ++ Sbjct: 388 EESRKARTEALTSIEPGSLHKGIVRKVVAWGVFVALPDAGGVEGLVHMSEASH-DRGAKL 446 Query: 319 SKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFG 378 + + G ++V VL +D ++ ++ L K +PW E + G R +GK+ + FG Sbjct: 447 ADLFKPGAEIDVKVLRVD-DKGKLWLSRKAATVDPWDAVKEKYAVGTRHKGKVARLQPFG 505 Query: 379 IFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAE 438 FI L+ GIDGL+H +D+S K GD++ VV DA RI L E Sbjct: 506 AFIELEPGIDGLIHTADLSMKPIQ-HPNEVVKVGDDVDVVVATCDAAGRRIGL-HPAPPE 563 Query: 439 DPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGV----EGYLRASEASRDRVEDATLV 494 + ++G V VT V G V + G++ A R D Sbjct: 564 GEESEPRQRVQQGKAVKVAVTQVTEGGLVVRVLGTTGRAARGFIPAGHTGTQRGTDLRKE 623 Query: 495 LSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAA 554 +G +++AK VD + LS+RA E EK A A+ K + Sbjct: 624 FPIGTQLDAKIIEVDPRRGEAKLSIRALKEDAEKQAYQQYRAGVAREAKFGTFADLMKKS 683 Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats. Identities = 61/309 (19%), Positives = 117/309 (37%), Gaps = 32/309 (10%) Query: 7 QLFEESLKEI------ETRPGSIVRGVVVAIDKDVVLV---DAGLKSESAIPAEQFKNAQ 57 ++ EE ++ PGS+ +G+V + V V DAG E + + + + Sbjct: 384 KMLEEESRKARTEALTSIEPGSLHKGIVRKVVAWGVFVALPDAGG-VEGLVHMSEASHDR 442 Query: 58 GEL---EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVING 114 G + G E+DV + V+D G+ LSR+ A W +++ Y G + Sbjct: 443 GAKLADLFKPGAEIDVKVLRVDDK-GKLWLSRKAATVDP-WDAVKEKYAVGTRHKGKVAR 500 Query: 115 KVKGGFTVELN-GIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAV 173 G +EL GI + + + ++P++ + + RR Sbjct: 501 LQPFGAFIELEPGIDGLIHTADLSMKPIQHPNEVVKVGDD----VDVVVATCDAAGRRIG 556 Query: 174 IESENSA-ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV-----DGLLHITDMAWKR 227 + E + + +Q+G VK V +T+ G V + G G + +R Sbjct: 557 LHPAPPEGEESEPRQRVQQGKAVKVAVTQVTEGGLVVRVLGTTGRAARGFIPAGHTGTQR 616 Query: 228 VKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNL 287 + +G ++ K+++ D R L ++ L ED ++Y G V Sbjct: 617 GTDLRKEFPIGTQLDAKIIEVDPRRGEAKLSIRALKEDAEKQAYQQYRAG------VARE 670 Query: 288 TDYGCFVEI 296 +G F ++ Sbjct: 671 AKFGTFADL 679 >UniRef50_C9LMR5 Hydroxymethylbutenyl pyrophosphate reductase/ribosomal protein S1 n=1 Tax=Dialister invisus DSM 15470 RepID=C9LMR5_9FIRM Length = 658 Score = 313 bits (801), Expect = 1e-83, Method: Composition-based stats. Identities = 107/352 (30%), Positives = 190/352 (53%), Gaps = 4/352 (1%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQG-- 58 + E ++ E+ ++ GS+V G VV + D + G K+E+ +P ++ + Sbjct: 288 IMEDMNEMLEQEEMNLDVHKGSVVEGKVVDLTDDKAWISFGYKTEAVLPLHEYSYPEPAS 347 Query: 59 -ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVK 117 + +QVGD + V + + +S+ K R W ++A++ E V +K Sbjct: 348 LKDVLQVGDSLRVQVVSSVKEDSTIFVSKIKVDRLADWDVAKEAFDKGEPVECEGIEAIK 407 Query: 118 GGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESE 177 G V+L +R F+P S D+R V L G++ + K++++D +N +V+SR+AV+E + Sbjct: 408 VGLLVQLKSLRGFIPLSQGDLRFVHSLQSLVGQKFKAKILEVDPTKNRLVLSRKAVLEEQ 467 Query: 178 NSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNV 237 + E D + + + G +KG VK + YGAFV L G++GLLHI+D++W+++ +++ Sbjct: 468 RTGELDVIEQAYENGEVLKGTVKKIMPYGAFVALNGIEGLLHISDVSWRKISKVEDVLQP 527 Query: 238 GDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE 297 I VK+ FDRE+ R+S K +PW K + + RV + ++G VE+E Sbjct: 528 EQVIDVKIKSFDREKQRISFSHKDCLPNPWETAVKDHEVDDIVGARVVKILEFGVIVELE 587 Query: 298 EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC 349 +G+ GL+H++EM + N P + VGD + V ++ IDE R+RIS L + Sbjct: 588 DGLTGLLHINEMT-QDHNKKPGDICRVGDDLTVRIIGIDEARKRISFSLVEA 638 Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats. Identities = 79/353 (22%), Positives = 165/353 (46%), Gaps = 12/353 (3%) Query: 173 VIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHP 231 + + E++++ ++ +G V+G V +LTD A++ G + +L + + ++ Sbjct: 289 MEDMNEMLEQEEMNLDVHKGSVVEGKVVDLTDDKAWISFGYKTEAVLPLHEYSYPEPASL 348 Query: 232 SEIVNVGDEITVKVLKFDRERTRVSLG-LKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDY 290 +++ VGD + V+V+ +E + + + +K W + + +G + Sbjct: 349 KDVLQVGDSLRVQVVSSVKEDSTIFVSKIKVDRLADWDVAKEAFDKGEPVECEGIEAIKV 408 Query: 291 GCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCK 350 G V+++ + G + +S+ D + +H + + VG + +L++D + R+ L K Sbjct: 409 GLLVQLK-SLRGFIPLSQGDL--RFVHSLQSL-VGQKFKAKILEVDPTKNRLVLSRKAVL 464 Query: 351 ANPW----QQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAV 406 + + G+ ++G +K I +G F+ L GI+GL+H+SD+SW + Sbjct: 465 EEQRTGELDVIEQAYENGEVLKGTVKKIMPYGAFVAL-NGIEGLLHISDVSW-RKISKVE 522 Query: 407 REYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGA 466 + I + D E++RIS K +P+ V ++ IV +V + G Sbjct: 523 DVLQPEQVIDVKIKSFDREKQRISFSHKDCLPNPWETAVKDHEVDDIVGARVVKILEFGV 582 Query: 467 TVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSV 519 VEL DG+ G L +E ++D + + VGD++ + G+D + IS S+ Sbjct: 583 IVELEDGLTGLLHINEMTQDHNKKPGDICRVGDDLTVRIIGIDEARKRISFSL 635 >UniRef50_B1C7U3 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C7U3_9FIRM Length = 666 Score = 312 bits (800), Expect = 2e-83, Method: Composition-based stats. Identities = 124/370 (33%), Positives = 208/370 (56%), Gaps = 13/370 (3%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL 60 M +SF + EES+KEI R G IV G +V +D + V ++ G KS+ + F E Sbjct: 277 MVDSFEKNIEESIKEI--REGDIVEGEIVMVDHNEVTMNIGYKSDGIVKKADFLYDLMED 334 Query: 61 ---EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVK 117 + GD+V V + + DG G LS+ K A ++ ++ ETV I VK Sbjct: 335 LTSKAAKGDKVKVMVMKMNDGTGNVSLSKIKVDELGALDEAKEKFDSKETVKAKITKVVK 394 Query: 118 GGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESE 177 GG V+L I+AF+P S DVR ++D L GKE+E ++++ D+++N ++VSR+ ++E Sbjct: 395 GGLIVDLGFIKAFMPASYYDVRFIKDFDSLLGKEIECRIVEFDKQKNKIIVSRKILLEEA 454 Query: 178 NSAER-------DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKH 230 + + + L+ G EV+ +KN+T++G F+DL GVDG +HI+D+AWKRV + Sbjct: 455 YKERKAKEKELKEAAIAALEIGKEVEAPIKNITNFGMFIDLNGVDGFIHISDIAWKRVGN 514 Query: 231 PSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDY 290 +++ VGD + V + D++ +V L +K L ++PW + Y G + + N T++ Sbjct: 515 INDLYKVGDSVKAIVTELDKDNYKVKLSVKDLTKEPWQEFIENYSVGQTVKATIKNTTNF 574 Query: 291 GCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCK 350 G F EI VEGL+H+S++ N + V GD V V ++DI++++R++SL +K+ Sbjct: 575 GAFAEIIPDVEGLIHISQLSHDRVN-NVEDAVKTGDEVNVKIIDINKDKRKVSLSIKETM 633 Query: 351 ANPWQQFAET 360 P ++ Sbjct: 634 DPPKRKIERN 643 Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats. Identities = 84/390 (21%), Positives = 175/390 (44%), Gaps = 21/390 (5%) Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNV 237 ++ ++ ++EG V+G + + +++G DG++ D + ++ + Sbjct: 282 EKNIEESIKEIREGDIVEGEIVMVDHNEVTMNIGYKSDGIVKKADFLYDLMEDLTSKAAK 341 Query: 238 GDEITVKVLKFDRERTRVSLG-LKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI 296 GD++ V V+K + VSL +K +++ + ++T + G V++ Sbjct: 342 GDKVKVMVMKMNDGTGNVSLSKIKVDELGALDEAKEKFDSKETVKAKITKVVKGGLIVDL 401 Query: 297 EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQ 356 ++ + S + + I + +G +E +++ D+++ +I + K +++ Sbjct: 402 GF-IKAFMPAS--YYDVRFIKDFDSL-LGKEIECRIVEFDKQKNKIIVSRKILLEEAYKE 457 Query: 357 FAET-----------HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEA 405 G VE IK+IT+FG+FI L G+DG +H+SDI+W G Sbjct: 458 RKAKEKELKEAAIAALEIGKEVEAPIKNITNFGMFIDL-NGVDGFIHISDIAWKRVG-NI 515 Query: 406 VREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKG 465 YK GD + A+V ++D + ++ L VK L ++P+ ++ G V + G Sbjct: 516 NDLYKVGDSVKAIVTELDKDNYKVKLSVKDLTKEPWQEFIENYSVGQTVKATIKNTTNFG 575 Query: 466 ATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEA 525 A E+ VEG + S+ S DRV + + GDEV K +++ R +SLS++ + Sbjct: 576 AFAEIIPDVEGLIHISQLSHDRVNNVEDAVKTGDEVNVKIIDINKDKRKVSLSIKETMDP 635 Query: 526 DEKDAIAT--VNKQEDANFSNNAMAEAFKA 553 ++ +K++ + + K+ Sbjct: 636 PKRKIERNKLYHKEDSNVTLGDIFGDLLKS 665 >UniRef50_A9B766 RNA binding S1 domain protein n=6 Tax=Chloroflexi (class) RepID=A9B766_HERA2 Length = 397 Score = 312 bits (800), Expect = 2e-83, Method: Composition-based stats. Identities = 122/358 (34%), Positives = 194/358 (54%), Gaps = 14/358 (3%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL-- 60 + + L E G + G+V+ ++ +LVD G K E IP + + EL Sbjct: 12 QDWTTLLAEY-DYQRPERGQLREGIVMRVEDSQILVDIGAKHEGVIPNQDLRRLPPELVS 70 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 I+ GD + V + E GE +LS + W + E+ + + + G KGG Sbjct: 71 GIKNGDTLQVYVMEPESKEGELVLSLNMVQVERDWQEAQTMLENGQIIEAGVVGYNKGGL 130 Query: 121 TVELNGIRAFLPGSLVDVRPVR--------DTLHLEGKELEFKVIKLDQKRNNVVVSRRA 172 V++ +R F+P S V R + G+ + KVI++D+ RN +V+S RA Sbjct: 131 LVQVGRVRGFVPASQVVNLHSRTGTEGQQSAMTKMVGQNIPLKVIEVDRDRNRLVLSERA 190 Query: 173 VIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPS 232 ++ +++++LLE L+ G V G V LT +GAF+DLGG DGL HI++++W+RV HP Sbjct: 191 AMQRWRQSQKERLLETLEPGAVVTGRVNQLTPFGAFIDLGGADGLAHISELSWQRVNHPR 250 Query: 233 EIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGC 292 E++ G E+ V VL+ DR+R R+ L L++L DPW I +RY G + G VTN+ +G Sbjct: 251 EVLQPGQEVQVYVLEVDRDRERIGLSLRRLQPDPWATIDQRYDLGQLIVGEVTNIAPFGV 310 Query: 293 FVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCK 350 FV +EEGVEGL+H SE+ +N + G V+V V+ +D +R+R+ L L++ Sbjct: 311 FVRVEEGVEGLIHASELT---ENGQSPDSLQQGQQVQVKVISLDRQRQRLGLSLRRVD 365 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 92/362 (25%), Positives = 164/362 (45%), Gaps = 17/362 (4%) Query: 173 VIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHP 231 ++ + + + + G +GIV + D VD+G +G++ D+ + Sbjct: 10 AVQDWTTLLAEYDYQRPERGQLREGIVMRVEDSQILVDIGAKHEGVIPNQDLRRLPPELV 69 Query: 232 SEIVNVGDEITVKVLKFDRERTRVSLGLKQLG-EDPWVAIAKRYPEGTKLTGRVTNLTDY 290 S + GD + V V++ + + + L L + E W G + V Sbjct: 70 S-GIKNGDTLQVYVMEPESKEGELVLSLNMVQVERDWQEAQTMLENGQIIEAGVVGYNKG 128 Query: 291 GCFVEIEEGVEGLVHVSEM----DWTNKNIHPSKVVNV-GDVVEVMVLDIDEERRRISLG 345 G V++ V G V S++ T S + + G + + V+++D +R R+ L Sbjct: 129 GLLVQVGR-VRGFVPASQVVNLHSRTGTEGQQSAMTKMVGQNIPLKVIEVDRDRNRLVLS 187 Query: 346 LKQC----KANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVA 401 + + + ++ ET G V G++ +T FG FI L GG DGL H+S++SW Sbjct: 188 ERAAMQRWRQSQKERLLETLEPGAVVTGRVNQLTPFGAFIDL-GGADGLAHISELSWQRV 246 Query: 402 GEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAV 461 + G E+ VL+VD +RERI L +++L DP+ G ++ G+VT + Sbjct: 247 N-HPREVLQPGQEVQVYVLEVDRDRERIGLSLRRLQPDPWATIDQRYDLGQLIVGEVTNI 305 Query: 462 DAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRA 521 G V + +GVEG + ASE + + + L G +V+ K +DR+ + + LS+R Sbjct: 306 APFGVFVRVEEGVEGLIHASELTEN--GQSPDSLQQGQQVQVKVISLDRQRQRLGLSLRR 363 Query: 522 KD 523 D Sbjct: 364 VD 365 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 89/368 (24%), Positives = 176/368 (47%), Gaps = 25/368 (6%) Query: 86 REKAKRHEAWITLEKAY-----EDAETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDVR 139 E + W TL Y E + G++ V++ +P + Sbjct: 5 TESMDAVQDWTTLLAEYDYQRPERGQLREGIVMRVEDSQILVDIGAKHEGVIPNQDLRRL 64 Query: 140 PVRDTLHLE-GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGI 198 P ++ G L+ V++ + K +V+S V + E +LEN G ++ Sbjct: 65 PPELVSGIKNGDTLQVYVMEPESKEGELVLSLNMVQVERDWQEAQTMLEN---GQIIEAG 121 Query: 199 VKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVN------VGDEITVKVLKFDRER 252 V G V +G V G + + + + +E VG I +KV++ DR+R Sbjct: 122 VVGYNKGGLLVQVGRVRGFVPASQVVNLHSRTGTEGQQSAMTKMVGQNIPLKVIEVDRDR 181 Query: 253 TRVSLGLKQLGED----PWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSE 308 R+ L + + + + G +TGRV LT +G F+++ G +GL H+SE Sbjct: 182 NRLVLSERAAMQRWRQSQKERLLETLEPGAVVTGRVNQLTPFGAFIDLG-GADGLAHISE 240 Query: 309 MDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVE 368 + W N HP +V+ G V+V VL++D +R RI L L++ + +PW + ++ G + Sbjct: 241 LSWQRVN-HPREVLQPGQEVQVYVLEVDRDRERIGLSLRRLQPDPWATIDQRYDLGQLIV 299 Query: 369 GKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERER 428 G++ +I FG+F+ ++ G++GL+H S+++ N +++++ ++ + V+ +D +R+R Sbjct: 300 GEVTNIAPFGVFVRVEEGVEGLIHASELTENGQSPDSLQQGQQ---VQVKVISLDRQRQR 356 Query: 429 ISLGVKQL 436 + L ++++ Sbjct: 357 LGLSLRRV 364 >UniRef50_Q49XT0 30S ribosomal protein S1 n=6 Tax=Staphylococcaceae RepID=RS1_STAS1 Length = 393 Score = 311 bits (798), Expect = 3e-83, Method: Composition-based stats. Identities = 125/368 (33%), Positives = 209/368 (56%), Gaps = 15/368 (4%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDA-GLKSESAIPAEQFKNAQGE 59 MTE F + + + G V G V I++ V+V G K IP Q + Sbjct: 1 MTEEFNESMIN-----DIKEGDKVTGEVQEIEEKQVIVAVNGAKFNGIIPISQLSTHHID 55 Query: 60 LE---IQVGDEVDVALDAVE----DGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVI 112 ++VGDE+ + VE + G +LS+ + + +++ L++ ++ +T+ + Sbjct: 56 NPSDAVKVGDEIGAYVTKVEYDEENETGAYILSKRQLETEKSYEFLQEQLDNNQTIEAKV 115 Query: 113 NGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRA 172 VKGG V++ G R F+P SL+ + D EG+ L+ KV +LD N V++SR+A Sbjct: 116 TEVVKGGLVVDV-GQRGFVPASLISTDFIEDFSDFEGQVLKLKVEELDPANNRVILSRKA 174 Query: 173 VIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPS 232 V EN+ ++D+LLE+L EG ++G V LT++GAFVD+GGVDGL+H+++++ + VK P Sbjct: 175 VEALENAEKKDELLESLNEGDVIEGKVARLTNFGAFVDIGGVDGLVHVSELSHEHVKSPE 234 Query: 233 EIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGC 292 ++V++G+ + VK+ D++ R+SL +K P+ +I + EG + G V L ++G Sbjct: 235 DVVSIGETVNVKIKSVDKDSERISLSIKDTLPSPFESIKGEFNEGDVIEGTVVRLANFGA 294 Query: 293 FVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN 352 FVEI+ GV+GLVH+SE+ ++ PS+ + G VV V VL +D E RISL +K N Sbjct: 295 FVEIKPGVQGLVHISEISHSHIG-SPSEALEPGQVVSVKVLGVDVENERISLSIKATLPN 353 Query: 353 PWQQFAET 360 +++ Sbjct: 354 ENVIESDS 361 Score = 241 bits (614), Expect = 8e-62, Method: Composition-based stats. Identities = 101/391 (25%), Positives = 181/391 (46%), Gaps = 23/391 (5%) Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGG--VDGLLHITDMAWKRVKHPSEIVNVGDE 240 + ++ +++EG +V G V+ + + V + G +G++ I+ ++ + +PS+ V VGDE Sbjct: 7 ESMINDIKEGDKVTGEVQEIEEKQVIVAVNGAKFNGIIPISQLSTHHIDNPSDAVKVGDE 66 Query: 241 ITVKVLKFD----RERTRVSLGLKQLG-EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVE 295 I V K + E L +QL E + + ++ + +VT + G V+ Sbjct: 67 IGAYVTKVEYDEENETGAYILSKRQLETEKSYEFLQEQLDNNQTIEAKVTEVVKGGLVVD 126 Query: 296 IEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKA---- 351 + G G V S + T+ S G V+++ V ++D R+ L K +A Sbjct: 127 V--GQRGFVPASLIS-TDFIEDFSDF--EGQVLKLKVEELDPANNRVILSRKAVEALENA 181 Query: 352 NPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKK 411 + E+ N+GD +EGK+ +T+FG F+ + GG+DGLVH+S++S + Sbjct: 182 EKKDELLESLNEGDVIEGKVARLTNFGAFVDI-GGVDGLVHVSELSHEHV-KSPEDVVSI 239 Query: 412 GDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELA 471 G+ + + VD + ERISL +K PF + +G ++ G V + GA VE+ Sbjct: 240 GETVNVKIKSVDKDSERISLSIKDTLPSPFESIKGEFNEGDVIEGTVVRLANFGAFVEIK 299 Query: 472 DGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEAD----- 526 GV+G + SE S + + L G V K GVD +N ISLS++A + Sbjct: 300 PGVQGLVHISEISHSHIGSPSEALEPGQVVSVKVLGVDVENERISLSIKATLPNENVIES 359 Query: 527 EKDAIATVNKQEDANFSNNAMAEAFKAAKGE 557 + + + + N + + F + Sbjct: 360 DSETTQSYLDNGSDDEDNPTLGDVFGDKLKD 390 >UniRef50_UPI00016C0B56 30S ribosomal protein S1 n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0B56 Length = 373 Score = 309 bits (793), Expect = 1e-82, Method: Composition-based stats. Identities = 112/359 (31%), Positives = 204/359 (56%), Gaps = 4/359 (1%) Query: 4 SFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ-GELEI 62 F ++++ +I G I + V ++++ + G +++ +P ++ N + + E+ Sbjct: 16 DFMSEVDKTMAKI--HRGDIRKATVQVVEENGIXASIGYHTDAYLPWREYSNREFDKSEV 73 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 ++GDE +V++ ++DG G L+S++K + +++ +EK +++ E VT + +KGG T Sbjct: 74 KIGDEFNVSILRLDDGDGNVLISKKKVENEKSYDDIEKMFKNKEIVTVKLKDVIKGGLTT 133 Query: 123 ELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 + G+RAF+PGS + V D GK ++ ++I+ ++ ++VS +A+ + +R Sbjct: 134 SIKGVRAFIPGSQITDTYVEDLHSYVGKSIDVQIIEFVPQKRKLIVSGKALAKQRRLEKR 193 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 L+ LQEG + G + L +YGAFVDL G++GL+H +D++W R+KHP +IV G E+ Sbjct: 194 QARLDQLQEGEKYIGKITKLMNYGAFVDLDGIEGLIHNSDLSWSRIKHPKDIVQEGQEVE 253 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 V ++ DRE +++L LK + DPW EG + G VT +G FV I +GVEG Sbjct: 254 VSIISIDRENGKIALALKDINNDPWENTVANLEEGQLVKGIVTRFALFGAFVRIADGVEG 313 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETH 361 L+H+S++ T + P V+ G VEV ++ ID+ +RISL L + + + Sbjct: 314 LIHISQIS-TPRPTKPQDVLTSGQEVEVKIIKIDKAEKRISLSLIAALDEIDPETKKMY 371 Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats. Identities = 95/361 (26%), Positives = 171/361 (47%), Gaps = 14/361 (3%) Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGD 239 E D+ + + G K V+ + + G +G D L + + + V +GD Sbjct: 20 EVDKTMAKIHRGDIRKATVQVVEENGIXASIGYHTDAYLPWREYSNREFDK--SEVKIGD 77 Query: 240 EITVKVLKFDRERTRVSLGLKQLG-EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE 298 E V +L+ D V + K++ E + I K + +T ++ ++ G I+ Sbjct: 78 EFNVSILRLDDGDGNVLISKKKVENEKSYDDIEKMFKNKEIVTVKLKDVIKGGLTTSIK- 136 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLG----LKQCKANPW 354 GV + S++ T S V G ++V +++ ++R++ + KQ + Sbjct: 137 GVRAFIPGSQITDTYVEDLHSYV---GKSIDVQIIEFVPQKRKLIVSGKALAKQRRLEKR 193 Query: 355 QQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDE 414 Q + +G++ GKI + ++G F+ LD GI+GL+H SD+SW+ + ++G E Sbjct: 194 QARLDQLQEGEKYIGKITKLMNYGAFVDLD-GIEGLIHNSDLSWSRI-KHPKDIVQEGQE 251 Query: 415 IAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGV 474 + ++ +D E +I+L +K + DP+ N VA ++G +V G VT GA V +ADGV Sbjct: 252 VEVSIISIDRENGKIALALKDINNDPWENTVANLEEGQLVKGIVTRFALFGAFVRIADGV 311 Query: 475 EGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATV 534 EG + S+ S R VL+ G EVE K +D+ + ISLS+ A + + + Sbjct: 312 EGLIHISQISTPRPTKPQDVLTSGQEVEVKIIKIDKAEKRISLSLIAALDEIDPETKKMY 371 Query: 535 N 535 Sbjct: 372 M 372 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 51/276 (18%), Positives = 115/276 (41%), Gaps = 13/276 (4%) Query: 268 VAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDV 327 + G V + + G I + + E ++N+ S+ V +GD Sbjct: 22 DKTMAKIHRGDIRKATVQVVEENGIXASIGYHTDAYLPWRE--YSNREFDKSE-VKIGDE 78 Query: 328 VEVMVLDIDEERRRISLGLKQCK-ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGG 386 V +L +D+ + + K+ + + + + V K+K + G+ + G Sbjct: 79 FNVSILRLDDGDGNVLISKKKVENEKSYDDIEKMFKNKEIVTVKLKDVIKGGLTTSI-KG 137 Query: 387 IDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAE----DPFN 442 + + S I+ + G I +++ ++ ++ + K LA+ + Sbjct: 138 VRAFIPGSQITDTYVEDL---HSYVGKSIDVQIIEFVPQKRKLIVSGKALAKQRRLEKRQ 194 Query: 443 NWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVE 502 + ++G GK+T + GA V+L DG+EG + S+ S R++ ++ G EVE Sbjct: 195 ARLDQLQEGEKYIGKITKLMNYGAFVDL-DGIEGLIHNSDLSWSRIKHPKDIVQEGQEVE 253 Query: 503 AKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQE 538 +DR+N I+L+++ + ++ +A + + + Sbjct: 254 VSIISIDRENGKIALALKDINNDPWENTVANLEEGQ 289 Score = 73.8 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 33/177 (18%), Positives = 72/177 (40%), Gaps = 8/177 (4%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK---NAQGELEIQVGDEVDVALD 73 + + G G + + VD E I + +Q G EV+V++ Sbjct: 199 QLQEGEKYIGKITKLMNYGAFVDLDG-IEGLIHNSDLSWSRIKHPKDIVQEGQEVEVSII 257 Query: 74 AVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL-NGIRAFLP 132 +++ G+ L+ + ++ W E+ + V G++ G V + +G+ + Sbjct: 258 SIDRENGKIALALKDI-NNDPWENTVANLEEGQLVKGIVTRFALFGAFVRIADGVEGLIH 316 Query: 133 GSLVDV-RPVRDTLHLE-GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLE 187 S + RP + L G+E+E K+IK+D+ + +S A ++ + + + Sbjct: 317 ISQISTPRPTKPQDVLTSGQEVEVKIIKIDKAEKRISLSLIAALDEIDPETKKMYMA 373 >UniRef50_Q5HFU7 30S ribosomal protein S1 n=61 Tax=Staphylococcus RepID=RS1_STAAC Length = 391 Score = 309 bits (791), Expect = 2e-82, Method: Composition-based stats. Identities = 122/368 (33%), Positives = 202/368 (54%), Gaps = 15/368 (4%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDA-GLKSESAIPAEQFKNAQGE 59 MTE F + + + G V G V ++ V+V G K IP Q + Sbjct: 1 MTEEFNESMIN-----DIKEGDKVTGEVQQVEDKQVVVHINGGKFNGIIPISQLSTHHID 55 Query: 60 LE---IQVGDEVDVALDAVE----DGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVI 112 ++ GDEV+ + VE + G +LSR + + +++ L++ ++ E + + Sbjct: 56 SPSEVVKEGDEVEAYVTKVEFDEENETGAYILSRRQLETEKSYSYLQEKLDNNEIIEAKV 115 Query: 113 NGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRA 172 VKGG V++ G R F+P SL+ + D +G+ + KV +LD + N V++SR+A Sbjct: 116 TEVVKGGLVVDV-GQRGFVPASLISTDFIEDFSVFDGQTIRIKVEELDPENNRVILSRKA 174 Query: 173 VIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPS 232 V + EN A++DQLL++L EG + G V LT +GAF+D+GGVDGL+H+++++ + V+ P Sbjct: 175 VEQEENDAKKDQLLQSLNEGDVIDGKVARLTQFGAFIDIGGVDGLVHVSELSHEHVQTPE 234 Query: 233 EIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGC 292 E+V++G ++ VK+ DR+ R+SL +K P+ I ++ E + G V L ++G Sbjct: 235 EVVSIGQDVKVKIKSIDRDTERISLSIKDTLPTPFENIKGQFHENDVIEGVVVRLANFGA 294 Query: 293 FVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN 352 FVEI GV+GLVH+SE+ + P +V+ G V V +L IDEE R+SL +K N Sbjct: 295 FVEIAPGVQGLVHISEIAHKHIGT-PGEVLEPGQQVNVKILGIDEENERVSLSIKATLPN 353 Query: 353 PWQQFAET 360 ++ Sbjct: 354 EDVVESDP 361 Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 102/391 (26%), Positives = 177/391 (45%), Gaps = 25/391 (6%) Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGG--VDGLLHITDMAWKRVKHPSEIVNVGDE 240 + ++ +++EG +V G V+ + D V + G +G++ I+ ++ + PSE+V GDE Sbjct: 7 ESMINDIKEGDKVTGEVQQVEDKQVVVHINGGKFNGIIPISQLSTHHIDSPSEVVKEGDE 66 Query: 241 ITVKVLKFDR----ERTRVSLGLKQLG-EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVE 295 + V K + E L +QL E + + ++ + +VT + G V+ Sbjct: 67 VEAYVTKVEFDEENETGAYILSRRQLETEKSYSYLQEKLDNNEIIEAKVTEVVKGGLVVD 126 Query: 296 IEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQ 355 + G G V S + V G + + V ++D E R+ L K + Sbjct: 127 V--GQRGFVPASLISTDFIE---DFSVFDGQTIRIKVEELDPENNRVILSRKAVEQEEND 181 Query: 356 QFAETH----NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKK 411 + N+GD ++GK+ +T FG FI + GG+DGLVH+S++S Sbjct: 182 AKKDQLLQSLNEGDVIDGKVARLTQFGAFIDI-GGVDGLVHVSELSHEHVQT-PEEVVSI 239 Query: 412 GDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELA 471 G ++ + +D + ERISL +K PF N + ++ G V + GA VE+A Sbjct: 240 GQDVKVKIKSIDRDTERISLSIKDTLPTPFENIKGQFHENDVIEGVVVRLANFGAFVEIA 299 Query: 472 DGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRA------KDEA 525 GV+G + SE + + VL G +V K G+D +N +SLS++A E+ Sbjct: 300 PGVQGLVHISEIAHKHIGTPGEVLEPGQQVNVKILGIDEENERVSLSIKATLPNEDVVES 359 Query: 526 DEKDAIATVNKQEDANFSNNAM-AEAFKAAK 555 D A + +E+ N + M + K K Sbjct: 360 DPSTTKAYLENEEEDNPTIGDMIGDKLKNLK 390 >UniRef50_Q0TNG2 Ribosomal protein S1 family n=9 Tax=Clostridium perfringens RepID=Q0TNG2_CLOP1 Length = 378 Score = 308 bits (790), Expect = 3e-82, Method: Composition-based stats. Identities = 125/361 (34%), Positives = 215/361 (59%), Gaps = 7/361 (1%) Query: 1 MTES--FAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ- 57 M+E+ ++L + S + G IV+G V+++ D ++V+ G ++ +P + N + Sbjct: 1 MSENLTMSELMD-SFELKHFHKGEIVKGKVISVKNDEIIVNIGHFADGVVPRNEISNDKN 59 Query: 58 -GELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKV 116 I V D++ V + + +DG G LLS+++A + W L++A+E+ +++ + V Sbjct: 60 FDINSINVDDDIFVMVLSGDDGEGNVLLSKKRADAIKVWDDLKEAFEEEKSIKVSLKEVV 119 Query: 117 KGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIES 176 KGG + NG+R F+P S R + + L GK LE +VI+ +++ VVVSRR + E Sbjct: 120 KGGIVGDFNGLRVFMPASQCAGRRIENLEELVGKTLEVRVIEFNKENRKVVVSRRVIDEE 179 Query: 177 ENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVN 236 + E+ L +++EG + KG V L +GAFVD+GGV+GL+H++DM+W RV P E+V+ Sbjct: 180 IRNNEKKALWSSIKEGEKRKGKVTRLAKFGAFVDIGGVEGLVHLSDMSWSRVHKPEEVVS 239 Query: 237 VGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI 296 VGDE+ V V + D +R R++L LK + ++PW + + G ++G+VTN G FVE+ Sbjct: 240 VGDEVEVFVSEVDMDRERIALSLKDVIKNPWETL-EGLKVGDVVSGKVTNFIKVGAFVEV 298 Query: 297 EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQ 356 G+EGLVH+SE+ N PS ++ +G V+V +L+ID+E +++SL +K + Sbjct: 299 LPGIEGLVHISEITDEN-IAKPSDILELGQEVKVKILNIDDENKKMSLSIKDAVETSNEY 357 Query: 357 F 357 Sbjct: 358 M 358 Score = 210 bits (536), Expect = 8e-53, Method: Composition-based stats. Identities = 99/376 (26%), Positives = 190/376 (50%), Gaps = 24/376 (6%) Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 L++ +G VKG V ++ + V++G DG++ +++ + + I NV D+I V Sbjct: 16 LKHFHKGEIVKGKVISVKNDEIIVNIGHFADGVVPRNEISNDKNFDINSI-NVDDDIFVM 74 Query: 245 VLKFDRERTRVSLGLKQLGEDP-WVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGL 303 VL D V L K+ W + + + E + + + G + G+ Sbjct: 75 VLSGDDGEGNVLLSKKRADAIKVWDDLKEAFEEEKSIKVSLKEVVKGGIVGDF-NGLRVF 133 Query: 304 VHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLK----QCKANPWQQFAE 359 + S+ + + ++V G +EV V++ ++E R++ + + + + N + Sbjct: 134 MPASQCAG-RRIENLEELV--GKTLEVRVIEFNKENRKVVVSRRVIDEEIRNNEKKALWS 190 Query: 360 THNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVV 419 + +G++ +GK+ + FG F+ + GG++GLVHLSD+SW+ + GDE+ V Sbjct: 191 SIKEGEKRKGKVTRLAKFGAFVDI-GGVEGLVHLSDMSWSRVHK-PEEVVSVGDEVEVFV 248 Query: 420 LQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLR 479 +VD +RERI+L +K + ++P+ + K G +V+GKVT GA VE+ G+EG + Sbjct: 249 SEVDMDRERIALSLKDVIKNPWET-LEGLKVGDVVSGKVTNFIKVGAFVEVLPGIEGLVH 307 Query: 480 ASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNK--Q 537 SE + + + + +L +G EV+ K +D +N+ +SLS++ DA+ T N+ Q Sbjct: 308 ISEITDENIAKPSDILELGQEVKVKILNIDDENKKMSLSIK--------DAVETSNEYMQ 359 Query: 538 EDANFSNNAMAEAFKA 553 + ++A+ FK Sbjct: 360 YNDEEEGYSLADLFKG 375 >UniRef50_A9KLR6 Hydroxymethylbutenyl pyrophosphate reductase n=58 Tax=Bacteria RepID=A9KLR6_CLOPH Length = 643 Score = 307 bits (786), Expect = 9e-82, Method: Composition-based stats. Identities = 107/351 (30%), Positives = 196/351 (55%), Gaps = 9/351 (2%) Query: 1 MTE-SFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE 59 M E SF QL EESL + G +V G V+ + +D ++++ G K++ + ++ N Sbjct: 284 MAEMSFEQLLEESL--VTIHNGEVVDGTVIRVKEDEIVLNIGYKADGILTRNEYTNQPNV 341 Query: 60 LE---IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKV 116 GD + V + V DG G+ LL+ ++ + LE+A+ + E + + + Sbjct: 342 DLRTVANEGDTMTVKVLKVNDGEGQVLLTYKRLAAEKGSKRLEEAFNNKEVLKAKVAAVL 401 Query: 117 KGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIES 176 GG +V ++ R F+P SL ++ + +E+EF + + + KR ++ R+ ++ + Sbjct: 402 DGGLSVIVDEARIFIPASLASDTYEKNLDKFKDQEIEFVISEFNPKRRRIIGDRKQLLVA 461 Query: 177 ENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVN 236 + L ++ G V+G VKN+TD+GAF+DLGG DGLLHI++M+W R++ P ++ Sbjct: 462 KKQELSKALFAKIKVGDVVEGTVKNVTDFGAFIDLGGADGLLHISEMSWGRIESPKKVFK 521 Query: 237 VGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI 296 VGD + + D + +++L LK ++PW +++Y G +TGRV +T++G FVE+ Sbjct: 522 VGDTVKAFIK--DIQGEKIALSLKFPEQNPWANASEKYAVGNVVTGRVARMTEFGAFVEL 579 Query: 297 EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLK 347 E GV+ L+HVS++ + P+ + +G V V+D + + ++ISL +K Sbjct: 580 EPGVDALLHVSQISKEH-IEKPADALKIGQEVTAKVVDFNNDEKKISLSIK 629 Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 101/364 (27%), Positives = 168/364 (46%), Gaps = 14/364 (3%) Query: 163 RNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHIT 221 N + + E ++ L + G V G V + + +++G DG+L Sbjct: 274 NNIIKEVHTRMAEMSFEQLLEESLVTIHNGEVVDGTVIRVKEDEIVLNIGYKADGILTRN 333 Query: 222 DMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLG-EDPWVAIAKRYPEGTKL 280 + + + N GD +TVKVLK + +V L K+L E + + + L Sbjct: 334 EYTNQPNVDLRTVANEGDTMTVKVLKVNDGEGQVLLTYKRLAAEKGSKRLEEAFNNKEVL 393 Query: 281 TGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERR 340 +V + D G V ++E + S T + +E ++ + + +RR Sbjct: 394 KAKVAAVLDGGLSVIVDEARI-FIPASLASDTYE--KNLDKFK-DQEIEFVISEFNPKRR 449 Query: 341 RISLGLKQCKANPWQQFAETH----NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDI 396 RI KQ Q+ ++ GD VEG +K++TDFG FI L GG DGL+H+S++ Sbjct: 450 RIIGDRKQLLVAKKQELSKALFAKIKVGDVVEGTVKNVTDFGAFIDL-GGADGLLHISEM 508 Query: 397 SWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTG 456 SW E + +K GD + A + D + E+I+L +K ++P+ N G +VTG Sbjct: 509 SWGRI-ESPKKVFKVGDTVKAFIK--DIQGEKIALSLKFPEQNPWANASEKYAVGNVVTG 565 Query: 457 KVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAIS 516 +V + GA VEL GV+ L S+ S++ +E L +G EV AK + + IS Sbjct: 566 RVARMTEFGAFVELEPGVDALLHVSQISKEHIEKPADALKIGQEVTAKVVDFNNDEKKIS 625 Query: 517 LSVR 520 LS++ Sbjct: 626 LSIK 629 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 88/338 (26%), Positives = 160/338 (47%), Gaps = 17/338 (5%) Query: 104 DAETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRPVRDTLHL--EGKELEFKVIKLD 160 + E V G + + + + L + +P D + EG + KV+K++ Sbjct: 302 NGEVVDGTVIRVKEDEIVLNIGYKADGILTRNEYTNQPNVDLRTVANEGDTMTVKVLKVN 361 Query: 161 QKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHI 220 V+++ + + + S ++ N + +K V + D G V + + Sbjct: 362 DGEGQVLLTYKRLAAEKGSKRLEEAFNNKE---VLKAKVAAVLDGGLSVIVDEARIFIPA 418 Query: 221 TDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAK----RYPE 276 + + K+ + EI + +F+ +R R+ KQL ++K + Sbjct: 419 SLASDTYEKNLDKF--KDQEIEFVISEFNPKRRRIIGDRKQLLVAKKQELSKALFAKIKV 476 Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDID 336 G + G V N+TD+G F+++ G +GL+H+SEM W + P KV VGD V+ + DI Sbjct: 477 GDVVEGTVKNVTDFGAFIDLG-GADGLLHISEMSWG-RIESPKKVFKVGDTVKAFIKDIQ 534 Query: 337 EERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDI 396 E +I+L LK + NPW +E + G+ V G++ +T+FG F+ L+ G+D L+H+S I Sbjct: 535 GE--KIALSLKFPEQNPWANASEKYAVGNVVTGRVARMTEFGAFVELEPGVDALLHVSQI 592 Query: 397 SWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVK 434 S E+ K G E+ A V+ + + ++ISL +K Sbjct: 593 S-KEHIEKPADALKIGQEVTAKVVDFNNDEKKISLSIK 629 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 71/298 (23%), Positives = 125/298 (41%), Gaps = 17/298 (5%) Query: 257 LGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNI 316 + +QL E+ V I G + G V + + + I +G++ +E N+ Sbjct: 287 MSFEQLLEESLVTIHN----GEVVDGTVIRVKEDEIVLNIGYKADGILTRNEYT-NQPNV 341 Query: 317 HPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQF-AETHNKGDRVEGKIKSIT 375 V N GD + V VL +++ ++ L K+ A + E N + ++ K+ ++ Sbjct: 342 DLRTVANEGDTMTVKVLKVNDGEGQVLLTYKRLAAEKGSKRLEEAFNNKEVLKAKVAAVL 401 Query: 376 DFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQ 435 D G+ + +D + S S E+ + ++K EI V+ + + +R RI KQ Sbjct: 402 DGGLSVIVDEA-RIFIPASLASDTY--EKNLDKFKD-QEIEFVISEFNPKRRRIIGDRKQ 457 Query: 436 L----AEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDA 491 L ++ A K G +V G V V GA ++L G +G L SE S R+E Sbjct: 458 LLVAKKQELSKALFAKIKVGDVVEGTVKNVTDFGAFIDLG-GADGLLHISEMSWGRIESP 516 Query: 492 TLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAE 549 V VGD V+A + + I+LS++ ++ +A M E Sbjct: 517 KKVFKVGDTVKAFIKDI--QGEKIALSLKFPEQNPWANASEKYAVGNVVTGRVARMTE 572 >UniRef50_C9LUH9 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LUH9_9FIRM Length = 373 Score = 304 bits (780), Expect = 5e-81, Method: Composition-based stats. Identities = 128/363 (35%), Positives = 213/363 (58%), Gaps = 7/363 (1%) Query: 5 FAQLFE-ESLKEIETRPGSIVRGVVVAIDKDVVLVDA-GLKSESAIPAEQFKNAQGELE- 61 L E E E R +V+ VVA+D V+ GLK++ I + + + + Sbjct: 1 MKSLLEAEEESMQEVREHDVVKATVVAVDDGQAYVNIAGLKADIPISKRELASPEPDSAK 60 Query: 62 --IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGG 119 ++V DE++V + ++ G T+ S+ +A R AW +E ED +TV I VKGG Sbjct: 61 DVVKVDDEIEVFVVSLGGENGATV-SKVRADRMVAWKEIEALKEDGQTVQAQITQVVKGG 119 Query: 120 FTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 ++G+R F+P S +++ V+D G+ +E I++D ++ +V+SRR+++E E Sbjct: 120 LVASVSGLRGFIPASQMELHFVKDLSIYVGQTVEALPIEIDIRKQRLVLSRRSLLEEERE 179 Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGD 239 +++++ L+ G ++G VK L +YGAF+D+GGVDGL HI+D+AW RVK PS++++VGD Sbjct: 180 KKQEEVFSKLEVGQIIRGTVKRLVEYGAFIDIGGVDGLAHISDLAWHRVKQPSDVLSVGD 239 Query: 240 EITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEG 299 E+ V V FD E R+SL +K DPW+ A+RY EGT + G++ LTD+G F+EIE G Sbjct: 240 EVDVYVKNFDPETKRISLSVKDTMRDPWLDKAERYAEGTHIKGKIIKLTDFGAFMEIEPG 299 Query: 300 VEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAE 359 +GL+ + E+ + + V +GD+V+V +L ID +R+RISL + + + + Sbjct: 300 FDGLIPMGELA-DRRIARADEAVQLGDIVKVKILHIDMKRKRISLSITRAQRDAEVSDVS 358 Query: 360 THN 362 + Sbjct: 359 YYK 361 Score = 224 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 87/374 (23%), Positives = 166/374 (44%), Gaps = 14/374 (3%) Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHIT--DMAWKRVKHPSEIVNV 237 ++ ++ ++E VK V + D A+V++ G+ + I+ ++A ++V V Sbjct: 6 EAEEESMQEVREHDVVKATVVAVDDGQAYVNIAGLKADIPISKRELASPEPDSAKDVVKV 65 Query: 238 GDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE 297 DEI V V+ E ++ W I +G + ++T + G + Sbjct: 66 DDEIEVFVVSLGGENGATVSKVRADRMVAWKEIEALKEDGQTVQAQITQVVKGGLVASVS 125 Query: 298 EGVEGLVHVSEMD-WTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQ 356 G+ G + S+M+ K++ + VG VE + ++ID ++R+ L + ++ Sbjct: 126 -GLRGFIPASQMELHFVKDLS----IYVGQTVEALPIEIDIRKQRLVLSRRSLLEEEREK 180 Query: 357 FA----ETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKG 412 G + G +K + ++G FI + GG+DGL H+SD++W+ ++ G Sbjct: 181 KQEEVFSKLEVGQIIRGTVKRLVEYGAFIDI-GGVDGLAHISDLAWHRV-KQPSDVLSVG 238 Query: 413 DEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELAD 472 DE+ V D E +RISL VK DP+ + +G + GK+ + GA +E+ Sbjct: 239 DEVDVYVKNFDPETKRISLSVKDTMRDPWLDKAERYAEGTHIKGKIIKLTDFGAFMEIEP 298 Query: 473 GVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIA 532 G +G + E + R+ A + +GD V+ K +D K + ISLS+ E ++ Sbjct: 299 GFDGLIPMGELADRRIARADEAVQLGDIVKVKILHIDMKRKRISLSITRAQRDAEVSDVS 358 Query: 533 TVNKQEDANFSNNA 546 + + Sbjct: 359 YYKDEPVTHEEGGE 372 Score = 46.1 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 40/93 (43%), Gaps = 5/93 (5%) Query: 20 PGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQGELEIQVGDEVDVALDAVE 76 G+ ++G ++ + ++ + IP + + A+ + +Q+GD V V + ++ Sbjct: 276 EGTHIKGKIIKLTDFGAFMEIEPGFDGLIPMGELADRRIARADEAVQLGDIVKVKILHID 335 Query: 77 DGFGETLLSREKAKRHEAWITLEKAYEDAETVT 109 LS +A+R + +Y E VT Sbjct: 336 MKRKRISLSITRAQRDA--EVSDVSYYKDEPVT 366 >UniRef50_B3T9S8 Putative S1 RNA binding domain protein n=1 Tax=uncultured marine microorganism HF4000_APKG7H23 RepID=B3T9S8_9ZZZZ Length = 379 Score = 302 bits (774), Expect = 2e-80, Method: Composition-based stats. Identities = 132/368 (35%), Positives = 211/368 (57%), Gaps = 10/368 (2%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK--NAQG 58 + S A+L +++ G IV G V+ D D +LV G K E IPA + + + G Sbjct: 11 LQPSMAELLDQAAPLQSLHRGDIVEGQVMRCDSDGILVSIGHKLEGIIPAREMRLLSRFG 70 Query: 59 ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 + + QVG V V + G+ +LS +KA+ E W L++ E + VTG I G +G Sbjct: 71 QDQSQVGATVLVYVLDPAGVEGQAILSLDKAQGEEVWHRLQQCAEAGQGVTGTIVGFNRG 130 Query: 119 GFTVELNGIRAFLPGSLVDVR------PVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRA 172 G V++ G++AF+P S + + G+E+ KV++++++R V+S RA Sbjct: 131 GAVVDVEGLQAFVPLSQMVLSIQAGGDTAEALAQRVGEEVSLKVLEVNRRRGRAVLSERA 190 Query: 173 VIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPS 232 ++ + +R+QL LQEG KG+V ++ +GAFVD+GG DGL+HI++++W V Sbjct: 191 MLREQREEQREQLFGELQEGEVRKGVVTGISSFGAFVDIGGADGLIHISELSWSPVSSVE 250 Query: 233 EIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGC 292 E+V V E+ V +L+ DRE R++L L+QL PW A+++ G ++G VT L D+G Sbjct: 251 EVVQVSQEVEVYILRVDREHRRIALSLRQLSPTPWTQAAQQFALGQLVSGTVTKLADFGA 310 Query: 293 FVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN 352 F +EE VEGL+HVSE+ HP +VV VGD + + ++ +D ER RI L L+Q + + Sbjct: 311 FTRVEETVEGLIHVSELS-DRHIRHPREVVQVGDSLTLRIVSLDLERHRIGLSLRQVE-D 368 Query: 353 PWQQFAET 360 P +F E+ Sbjct: 369 PEGKFEES 376 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 90/352 (25%), Positives = 163/352 (46%), Gaps = 13/352 (3%) Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 L++L G V+G V G V +G ++G++ +M + + VG + V Sbjct: 25 LQSLHRGDIVEGQVMRCDSDGILVSIGHKLEGIIPAREMRLLS-RFGQDQSQVGATVLVY 83 Query: 245 VLKFDRERTRVSLGL-KQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGL 303 VL + L L K GE+ W + + G +TG + G V++E G++ Sbjct: 84 VLDPAGVEGQAILSLDKAQGEEVWHRLQQCAEAGQGVTGTIVGFNRGGAVVDVE-GLQAF 142 Query: 304 VHVSEMDWTNK-NIHPSKVV--NVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAE- 359 V +S+M + + ++ + VG+ V + VL+++ R R L + ++ E Sbjct: 143 VPLSQMVLSIQAGGDTAEALAQRVGEEVSLKVLEVNRRRGRAVLSERAMLREQREEQREQ 202 Query: 360 ---THNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIA 416 +G+ +G + I+ FG F+ + GG DGL+H+S++SW+ E+ Sbjct: 203 LFGELQEGEVRKGVVTGISSFGAFVDI-GGADGLIHISELSWSPVSSVEEVVQVS-QEVE 260 Query: 417 AVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEG 476 +L+VD E RI+L ++QL+ P+ G +V+G VT + GA + + VEG Sbjct: 261 VYILRVDREHRRIALSLRQLSPTPWTQAAQQFALGQLVSGTVTKLADFGAFTRVEETVEG 320 Query: 477 YLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEK 528 + SE S + V+ VGD + + +D + I LS+R ++ + K Sbjct: 321 LIHVSELSDRHIRHPREVVQVGDSLTLRIVSLDLERHRIGLSLRQVEDPEGK 372 Score = 118 bits (297), Expect = 5e-25, Method: Composition-based stats. Identities = 70/283 (24%), Positives = 114/283 (40%), Gaps = 12/283 (4%) Query: 275 PEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLD 334 G + G+V G V I +EG++ EM ++ VG V V VLD Sbjct: 29 HRGDIVEGQVMRCDSDGILVSIGHKLEGIIPAREMRLLSRFG--QDQSQVGATVLVYVLD 86 Query: 335 IDEERRRISLGL-KQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHL 393 + L L K W + + G V G I G + ++ G+ V L Sbjct: 87 PAGVEGQAILSLDKAQGEEVWHRLQQCAEAGQGVTGTIVGFNRGGAVVDVE-GLQAFVPL 145 Query: 394 SD--ISWNVAGEEAVREYK-KGDEIAAVVLQVDAERERISLGVKQL----AEDPFNNWVA 446 S +S G+ A + G+E++ VL+V+ R R L + + E+ Sbjct: 146 SQMVLSIQAGGDTAEALAQRVGEEVSLKVLEVNRRRGRAVLSERAMLREQREEQREQLFG 205 Query: 447 LNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFT 506 ++G + G VT + + GA V++ G +G + SE S V V+ V EVE Sbjct: 206 ELQEGEVRKGVVTGISSFGAFVDIG-GADGLIHISELSWSPVSSVEEVVQVSQEVEVYIL 264 Query: 507 GVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAE 549 VDR++R I+LS+R A + + + +A+ Sbjct: 265 RVDREHRRIALSLRQLSPTPWTQAAQQFALGQLVSGTVTKLAD 307 >UniRef50_O06000 30S ribosomal protein S1 homolog n=76 Tax=Bacillaceae RepID=RS1H_BACC1 Length = 382 Score = 302 bits (773), Expect = 3e-80, Method: Composition-based stats. Identities = 121/347 (34%), Positives = 203/347 (58%), Gaps = 7/347 (2%) Query: 6 AQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE---I 62 ++ EE + E + G +V G V +++ VLV+ G K++ IP + N E + Sbjct: 3 EKMNEEVMDSKELQVGDVVTGSVTKVEEKQVLVNVGYKTDGVIPISELANVHIEKASDVV 62 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 ++ +++ + +E+ +LS+ +AWI L++ + + V GG V Sbjct: 63 ELDQILELKIIKLEEND--LVLSKRAVDAEKAWIELQEKFTSGHVFDVTVKDIVNGGLVV 120 Query: 123 ELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 +L G+R F+P SLV+V V D +GK L K+++LD+++N V++S +AV+E E +++ Sbjct: 121 DL-GVRGFIPASLVEVHYVEDFTDYKGKTLAVKIVELDREKNRVILSHKAVVELELDSKK 179 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 + + +L+EG V+G V+ LTD+GAFV++GGVDGL+HI+ ++ +RV+ PSE++ G ++ Sbjct: 180 KEAISSLKEGDVVEGTVQRLTDFGAFVNVGGVDGLVHISQISHERVEQPSEVLEQGQKVK 239 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 VKVL D + R+SL +K PW IA G G V L +G FVEI GVEG Sbjct: 240 VKVLSVDADTQRISLSIKAAQPGPWENIAGEVKAGDIREGIVKRLVTFGAFVEILPGVEG 299 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC 349 LVHVS++ +P++V+ +G V+V VL++ +RISL +K+ Sbjct: 300 LVHVSQIA-NRHVKNPNEVLEMGQEVKVKVLEVHVAEKRISLSIKEA 345 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 101/378 (26%), Positives = 183/378 (48%), Gaps = 18/378 (4%) Query: 187 ENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKV 245 + LQ G V G V + + V++G DG++ I+++A ++ S++V + + +K+ Sbjct: 13 KELQVGDVVTGSVTKVEEKQVLVNVGYKTDGVIPISELANVHIEKASDVVELDQILELKI 72 Query: 246 LKFDRERTRVSLGLKQL-GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLV 304 +K + + L + + E W+ + +++ G V ++ + G V++ GV G + Sbjct: 73 IKLEEND--LVLSKRAVDAEKAWIELQEKFTSGHVFDVTVKDIVNGGLVVDL--GVRGFI 128 Query: 305 HVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC----KANPWQQFAET 360 S + + + G + V ++++D E+ R+ L K + ++ + Sbjct: 129 PAS-LVEVHYVEDFTDY--KGKTLAVKIVELDREKNRVILSHKAVVELELDSKKKEAISS 185 Query: 361 HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL 420 +GD VEG ++ +TDFG F+ + GG+DGLVH+S IS E+ ++G ++ VL Sbjct: 186 LKEGDVVEGTVQRLTDFGAFVNV-GGVDGLVHISQISHERV-EQPSEVLEQGQKVKVKVL 243 Query: 421 QVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRA 480 VDA+ +RISL +K P+ N K G I G V + GA VE+ GVEG + Sbjct: 244 SVDADTQRISLSIKAAQPGPWENIAGEVKAGDIREGIVKRLVTFGAFVEILPGVEGLVHV 303 Query: 481 SEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADE--KDAIATVNKQE 538 S+ + V++ VL +G EV+ K V + ISLS++ E + +D + Sbjct: 304 SQIANRHVKNPNEVLEMGQEVKVKVLEVHVAEKRISLSIKEAFEENNVTEDYSQYEPNAD 363 Query: 539 DANFSN-NAMAEAFKAAK 555 A F + + E K K Sbjct: 364 SATFQLSDIIGEQLKKLK 381 Score = 83.9 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 35/170 (20%), Positives = 70/170 (41%), Gaps = 8/170 (4%) Query: 18 TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQV---GDEVDVALDA 74 + G +V G V + V+ G + + Q + + E +V G +V V + + Sbjct: 186 LKEGDVVEGTVQRLTDFGAFVNVGG-VDGLVHISQISHERVEQPSEVLEQGQKVKVKVLS 244 Query: 75 VEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFLPG 133 V+ LS KA + W + + + G++ V G VE+ G+ + Sbjct: 245 VDADTQRISLSI-KAAQPGPWENIAGEVKAGDIREGIVKRLVTFGAFVEILPGVEGLVHV 303 Query: 134 SLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 S + R V++ + G+E++ KV+++ + +S + E N E Sbjct: 304 SQIANRHVKNPNEVLEMGQEVKVKVLEVHVAEKRISLSIKEAFEENNVTE 353 Score = 81.2 bits (199), Expect = 9e-14, Method: Composition-based stats. Identities = 42/194 (21%), Positives = 85/194 (43%), Gaps = 12/194 (6%) Query: 350 KANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREY 409 K N ++ GD V G + + + + + + DG++ +S+++ NV E+A Sbjct: 4 KMNEEVMDSKELQVGDVVTGSVTKVEEKQVLVNVGYKTDGVIPISELA-NVHIEKASDVV 62 Query: 410 KKGDEIAAVVLQVDAERERISLGVKQL-AEDPFNNWVALNKKGAIVTGKVTAVDAKGATV 468 + + ++++ E + L + + AE + G + V + G V Sbjct: 63 ELDQILELKIIKL--EENDLVLSKRAVDAEKAWIELQEKFTSGHVFDVTVKDIVNGGLVV 120 Query: 469 ELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEAD-- 526 +L GV G++ AS VED T G + K +DR+ + LS +A E + Sbjct: 121 DL--GVRGFIPASLVEVHYVEDFTDY--KGKTLAVKIVELDREKNRVILSHKAVVELELD 176 Query: 527 --EKDAIATVNKQE 538 +K+AI+++ + + Sbjct: 177 SKKKEAISSLKEGD 190 >UniRef50_Q5M0R3 30S ribosomal protein S1 n=88 Tax=Bacilli RepID=Q5M0R3_STRT1 Length = 417 Score = 301 bits (772), Expect = 3e-80, Method: Composition-based stats. Identities = 128/374 (34%), Positives = 206/374 (55%), Gaps = 14/374 (3%) Query: 3 ESFAQL--FEESLKEI-ETRPGSIVRGVVVAIDKDVV-LVDAGLKSESAIPAEQF---KN 55 E F ++ FEE L + E G +V V+++D D +V G E + + ++ Sbjct: 13 EDFFRMNEFEELLNSVSEVSTGDVVTAEVISVDNDQANVVIEGTGIEGVLTRRELTNDRD 72 Query: 56 AQGELEIQVGDEVDVALDA----VEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGV 111 A ++ G+ ++V + + L+S+++ + +AW L E+ TV G Sbjct: 73 ANVADLVKDGETLEVLVLRQVVGKDTDTVTYLVSKKRLEARKAWDKLVGREEEVVTVKG- 131 Query: 112 INGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRR 171 VKGG +VE G+R F+P S++D R VR+T G+E + K+ ++D N ++SRR Sbjct: 132 -TRAVKGGLSVEFEGLRGFIPASMIDTRFVRNTEQFVGQEFDAKIKEVDPAENRFILSRR 190 Query: 172 AVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHP 231 V+E+E R ++ L+ G V G V LT +GAF+DLGGVDGL+H+T+++ +R P Sbjct: 191 EVVEAEAIEARKEVFSKLEVGSVVTGKVARLTSFGAFIDLGGVDGLVHVTELSHERNVSP 250 Query: 232 SEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYG 291 +V+VGDEI VKVL D E RVSL LK PW + ++ G + G+V LTD+G Sbjct: 251 KSVVSVGDEIEVKVLAIDEEAGRVSLSLKATTPGPWDGVEQKLAAGDVIEGKVKRLTDFG 310 Query: 292 CFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKA 351 FVE+ G++GLVH+S++ + +P V++VG V V VL+++ + R+SL +K + Sbjct: 311 GFVEVLPGIDGLVHISQISH-KRVENPKDVLSVGQDVTVKVLEVNADAERVSLSIKALEE 369 Query: 352 NPWQQFAETHNKGD 365 P E + K Sbjct: 370 RPANAEGENNEKRQ 383 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 100/389 (25%), Positives = 168/389 (43%), Gaps = 22/389 (5%) Query: 165 NVVVSRRAVIESENSAERDQLLENLQE---GMEVKGIVKNLTDYGAFVDLGG--VDGLLH 219 V + + + E ++LL ++ E G V V ++ + A V + G ++G+L Sbjct: 4 RVRIGWLLLEDFFRMNEFEELLNSVSEVSTGDVVTAEVISVDNDQANVVIEGTGIEGVLT 63 Query: 220 ITDMAWKRVKHPSEIVNVGDEITVKVL----KFDRERTRVSLGLKQLGED-PWVAIAKRY 274 ++ R + +++V G+ + V VL D + + K+L W + R Sbjct: 64 RRELTNDRDANVADLVKDGETLEVLVLRQVVGKDTDTVTYLVSKKRLEARKAWDKLVGRE 123 Query: 275 PEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLD 334 E + G T G VE E G+ G + S M T + + V G + + + Sbjct: 124 EEVVTVKG--TRAVKGGLSVEFE-GLRGFIPAS-MIDTRFVRNTEQFV--GQEFDAKIKE 177 Query: 335 IDEERRRISLGLKQCKA----NPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGL 390 +D R L ++ ++ G V GK+ +T FG FI L GG+DGL Sbjct: 178 VDPAENRFILSRREVVEAEAIEARKEVFSKLEVGSVVTGKVARLTSFGAFIDL-GGVDGL 236 Query: 391 VHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKK 450 VH++++S GDEI VL +D E R+SL +K P++ Sbjct: 237 VHVTELSHER-NVSPKSVVSVGDEIEVKVLAIDEEAGRVSLSLKATTPGPWDGVEQKLAA 295 Query: 451 GAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDR 510 G ++ GKV + G VE+ G++G + S+ S RVE+ VLSVG +V K V+ Sbjct: 296 GDVIEGKVKRLTDFGGFVEVLPGIDGLVHISQISHKRVENPKDVLSVGQDVTVKVLEVNA 355 Query: 511 KNRAISLSVRAKDEADEKDAIATVNKQED 539 +SLS++A +E K++ Sbjct: 356 DAERVSLSIKALEERPANAEGENNEKRQS 384 >UniRef50_A4IQA6 30S ribosomal protein S1 n=10 Tax=Bacillaceae RepID=A4IQA6_GEOTN Length = 387 Score = 301 bits (770), Expect = 5e-80, Method: Composition-based stats. Identities = 135/363 (37%), Positives = 201/363 (55%), Gaps = 11/363 (3%) Query: 8 LFEESLKEIETR-PGSIVRGVVVAIDKDVVLVDA-GLKSESAIPAEQFKNAQGELE---I 62 + EE ++ IVRG VV ++ VLV+ K IP + N E + Sbjct: 1 MTEEMNVQVNVYGVDDIVRGKVVKLEDKQVLVEVENSKQSGIIPISELSNLHIEKPSDAV 60 Query: 63 QVGDEVDVALDAVEDG----FGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 VGDEV + VE+G G +LS++ AW LE+ + ET V+ VKG Sbjct: 61 AVGDEVTAKVKKVEEGKDGEEGLLILSKKAVDAERAWEELERKFASGETFETVVKDIVKG 120 Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 G ++ G+R F+P SLV+ V D +GK L KV++LD+++N V++S RAV+E E Sbjct: 121 GLVADV-GVRGFIPASLVEPHYVEDFSDYKGKTLTVKVVELDREKNRVILSHRAVVEEEQ 179 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVG 238 ++ +LL L+ G + G+V+ + D+G FVD+GG DGL+HI+ ++ RV HPSE+V G Sbjct: 180 ERQQKELLSRLEAGQVLDGVVRRIADFGVFVDVGGFDGLVHISQLSHTRVAHPSEVVKEG 239 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE 298 D + VKVL D E+ R+SL +K+ PW I+++ +TG V L +G FVEI Sbjct: 240 DAVKVKVLAVDPEQGRLSLSIKEALPGPWEGISEKVKPSDVVTGTVKRLASFGAFVEIFP 299 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFA 358 GVEGLVHVS++ + P +V+ GD V+ VLD++E RISL ++ A Sbjct: 300 GVEGLVHVSQIA-NRRIGSPHEVLKEGDEVKAKVLDVNEAEHRISLSIRALLEEETAAPA 358 Query: 359 ETH 361 E + Sbjct: 359 EDY 361 Score = 237 bits (606), Expect = 7e-61, Method: Composition-based stats. Identities = 103/381 (27%), Positives = 171/381 (44%), Gaps = 23/381 (6%) Query: 191 EGMEVKGIVKNLTDYGAFVDLGG--VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKF 248 V+G V L D V++ G++ I++++ ++ PS+ V VGDE+T KV K Sbjct: 14 VDDIVRGKVVKLEDKQVLVEVENSKQSGIIPISELSNLHIEKPSDAVAVGDEVTAKVKKV 73 Query: 249 ----DRERTRVSLGLKQL-GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGL 303 D E + L K + E W + +++ G V ++ G ++ GV G Sbjct: 74 EEGKDGEEGLLILSKKAVDAERAWEELERKFASGETFETVVKDIVKGGLVADV--GVRGF 131 Query: 304 VHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC----KANPWQQFAE 359 + S + + S G + V V+++D E+ R+ L + + ++ Sbjct: 132 IPAS-LVEPHYVEDFSDY--KGKTLTVKVVELDREKNRVILSHRAVVEEEQERQQKELLS 188 Query: 360 THNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVV 419 G ++G ++ I DFG+F+ + GG DGLVH+S +S K+GD + V Sbjct: 189 RLEAGQVLDGVVRRIADFGVFVDV-GGFDGLVHISQLSHTRVA-HPSEVVKEGDAVKVKV 246 Query: 420 LQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLR 479 L VD E+ R+SL +K+ P+ K +VTG V + + GA VE+ GVEG + Sbjct: 247 LAVDPEQGRLSLSIKEALPGPWEGISEKVKPSDVVTGTVKRLASFGAFVEIFPGVEGLVH 306 Query: 480 ASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQED 539 S+ + R+ VL GDEV+AK V+ ISLS+RA E + ++ Sbjct: 307 VSQIANRRIGSPHEVLKEGDEVKAKVLDVNEAEHRISLSIRALLEEETAAPAEDYSQYTK 366 Query: 540 ANFSNN-----AMAEAFKAAK 555 + + E K K Sbjct: 367 VAETRGFQLGEVIGEQLKKLK 387 Score = 80.4 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 41/177 (23%), Positives = 70/177 (39%), Gaps = 11/177 (6%) Query: 352 NPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDG-GIDGLVHLSDISWNVAGEEAVREYK 410 + D V GK+ + D + + ++ G++ +S++S N+ E+ Sbjct: 3 EEMNVQVNVYGVDDIVRGKVVKLEDKQVLVEVENSKQSGIIPISELS-NLHIEKPSDAVA 61 Query: 411 KGDEIAAVVLQV----DAERERISLGVKQL-AEDPFNNWVALNKKGAIVTGKVTAVDAKG 465 GDE+ A V +V D E + L K + AE + G V + G Sbjct: 62 VGDEVTAKVKKVEEGKDGEEGLLILSKKAVDAERAWEELERKFASGETFETVVKDIVKGG 121 Query: 466 ATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAK 522 ++ GV G++ AS VED + G + K +DR+ + LS RA Sbjct: 122 LVADV--GVRGFIPASLVEPHYVEDFSDY--KGKTLTVKVVELDREKNRVILSHRAV 174 Score = 59.6 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 5/94 (5%) Query: 445 VALNKKGAIVTGKVTAVDAKGATVELAD-GVEGYLRASEASRDRVEDATLVLSVGDEVEA 503 V + IV GKV ++ K VE+ + G + SE S +E + ++VGDEV A Sbjct: 9 VNVYGVDDIVRGKVVKLEDKQVLVEVENSKQSGIIPISELSNLHIEKPSDAVAVGDEVTA 68 Query: 504 KFTGV----DRKNRAISLSVRAKDEADEKDAIAT 533 K V D + + LS +A D + + Sbjct: 69 KVKKVEEGKDGEEGLLILSKKAVDAERAWEELER 102 >UniRef50_A8YV34 30S ribosomal protein S1 n=29 Tax=Lactobacillus RepID=A8YV34_LACH4 Length = 403 Score = 301 bits (770), Expect = 6e-80, Method: Composition-based stats. Identities = 117/359 (32%), Positives = 194/359 (54%), Gaps = 9/359 (2%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLV-DAGLKSESAIPAEQF---KNA 56 M+E+ Q + + G IV V+ ++ + V E I ++ +NA Sbjct: 1 MSENSNQFLDALKQMQGVEVGDIVDVEVLDVEDGQINVGVVNAGVEGVITRREYTSDRNA 60 Query: 57 QGELEIQVGDEVDVALDAV---EDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVIN 113 ++ GD+ + + GE S + K EA+ L+K +E+ + G + Sbjct: 61 DLRDLVKPGDKFKALVLRRAGGDKENGEFFFSVTRLKEREAYDKLQKDFEEGNAIEGTVT 120 Query: 114 GKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAV 173 V+GG V++ G R FLP SL+ R V D GK ++ K+ ++D +N +++S + + Sbjct: 121 SSVRGGLLVDV-GTRGFLPASLISNRYVSDLKPYIGKTMKLKITEIDPNKNRLILSHKDL 179 Query: 174 IESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSE 233 IE E D++ L G ++G V LT++GAF+D+GGVDGL+HI+++++K V PS+ Sbjct: 180 IEEEREEAFDKVASQLVVGDVIEGKVSRLTNFGAFIDVGGVDGLVHISEISYKHVDKPSD 239 Query: 234 IVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCF 293 ++ G ++ VKV+ D +R R+SL +KQ P+ EG G V +LT++G F Sbjct: 240 VLKAGQDVKVKVIGIDDDRHRISLSIKQTEPSPFEQATADLNEGDVFEGEVKSLTNFGAF 299 Query: 294 VEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN 352 VE+ +G++GLVHVSE+ + + PS V+ V V+V VL+ID RRISL +K +N Sbjct: 300 VEVADGIQGLVHVSEISNKHVD-KPSDVLKVDQTVKVKVLNIDPSDRRISLSIKAADSN 357 Score = 240 bits (613), Expect = 9e-62, Method: Composition-based stats. Identities = 100/350 (28%), Positives = 174/350 (49%), Gaps = 17/350 (4%) Query: 184 QLLENLQEGMEVKGIVKNLTDYGAFVDL--GGVDGLLHITDMAWKRVKHPSEIVNVGDEI 241 + ++ ++ G V V ++ D V + GV+G++ + R ++V GD+ Sbjct: 13 KQMQGVEVGDIVDVEVLDVEDGQINVGVVNAGVEGVITRREYTSDRNADLRDLVKPGDKF 72 Query: 242 TVKVL---KFDRERTRVSLGLKQLGE-DPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE 297 VL D+E + +L E + + + K + EG + G VT+ G V++ Sbjct: 73 KALVLRRAGGDKENGEFFFSVTRLKEREAYDKLQKDFEEGNAIEGTVTSSVRGGLLVDV- 131 Query: 298 EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC----KANP 353 G G + S + N+ + K +G +++ + +ID + R+ L K + Sbjct: 132 -GTRGFLPASLIS--NRYVSDLKPY-IGKTMKLKITEIDPNKNRLILSHKDLIEEEREEA 187 Query: 354 WQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGD 413 + + A GD +EGK+ +T+FG FI + GG+DGLVH+S+IS+ ++ K G Sbjct: 188 FDKVASQLVVGDVIEGKVSRLTNFGAFIDV-GGVDGLVHISEISYKHV-DKPSDVLKAGQ 245 Query: 414 EIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADG 473 ++ V+ +D +R RISL +KQ PF A +G + G+V ++ GA VE+ADG Sbjct: 246 DVKVKVIGIDDDRHRISLSIKQTEPSPFEQATADLNEGDVFEGEVKSLTNFGAFVEVADG 305 Query: 474 VEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKD 523 ++G + SE S V+ + VL V V+ K +D +R ISLS++A D Sbjct: 306 IQGLVHVSEISNKHVDKPSDVLKVDQTVKVKVLNIDPSDRRISLSIKAAD 355 Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 98/348 (28%), Positives = 172/348 (49%), Gaps = 20/348 (5%) Query: 103 EDAETVTGVINGKVKGGFTVEL--NGIRAFLPGSLVDVRPVRDTLHLE--GKELEFKVIK 158 E + V + G V + G+ + D L G + + V++ Sbjct: 19 EVGDIVDVEVLDVEDGQINVGVVNAGVEGVITRREYTSDRNADLRDLVKPGDKFKALVLR 78 Query: 159 L---DQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVD 215 D++ S + E E D+L ++ +EG ++G V + G VD+ G Sbjct: 79 RAGGDKENGEFFFSVTRLKEREAY---DKLQKDFEEGNAIEGTVTSSVRGGLLVDV-GTR 134 Query: 216 GLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGED----PWVAIA 271 G L + ++ + V +G + +K+ + D + R+ L K L E+ + +A Sbjct: 135 GFLPASLISNRYVSDLKPY--IGKTMKLKITEIDPNKNRLILSHKDLIEEEREEAFDKVA 192 Query: 272 KRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVM 331 + G + G+V+ LT++G F+++ GV+GLVH+SE+ + + + PS V+ G V+V Sbjct: 193 SQLVVGDVIEGKVSRLTNFGAFIDVG-GVDGLVHISEISYKHVD-KPSDVLKAGQDVKVK 250 Query: 332 VLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLV 391 V+ ID++R RISL +KQ + +P++Q N+GD EG++KS+T+FG F+ + GI GLV Sbjct: 251 VIGIDDDRHRISLSIKQTEPSPFEQATADLNEGDVFEGEVKSLTNFGAFVEVADGIQGLV 310 Query: 392 HLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAED 439 H+S+IS N ++ K + VL +D RISL +K + Sbjct: 311 HVSEIS-NKHVDKPSDVLKVDQTVKVKVLNIDPSDRRISLSIKAADSN 357 Score = 152 bits (385), Expect = 3e-35, Method: Composition-based stats. Identities = 63/280 (22%), Positives = 124/280 (44%), Gaps = 16/280 (5%) Query: 268 VAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE-GVEGLVHVSEMDWTNKNIHPSKVVNVGD 326 + + G + V ++ D V + GVEG++ E +++N +V GD Sbjct: 12 LKQMQGVEVGDIVDVEVLDVEDGQINVGVVNAGVEGVITRREYT-SDRNADLRDLVKPGD 70 Query: 327 VVEVMVLDI---DEERRRISLGLKQCKA-NPWQQFAETHNKGDRVEGKIKSITDFGIFIG 382 + +VL D+E + + K + + + +G+ +EG + S G+ + Sbjct: 71 KFKALVLRRAGGDKENGEFFFSVTRLKEREAYDKLQKDFEEGNAIEGTVTSSVRGGLLVD 130 Query: 383 LDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDP-- 440 + G G + S IS + + G + + ++D + R+ L K L E+ Sbjct: 131 V--GTRGFLPASLISNRYVSDL---KPYIGKTMKLKITEIDPNKNRLILSHKDLIEEERE 185 Query: 441 --FNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVG 498 F+ + G ++ GKV+ + GA +++ GV+G + SE S V+ + VL G Sbjct: 186 EAFDKVASQLVVGDVIEGKVSRLTNFGAFIDVG-GVDGLVHISEISYKHVDKPSDVLKAG 244 Query: 499 DEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQE 538 +V+ K G+D ISLS++ + + + A A +N+ + Sbjct: 245 QDVKVKVIGIDDDRHRISLSIKQTEPSPFEQATADLNEGD 284 Score = 45.7 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 11/81 (13%), Positives = 28/81 (34%), Gaps = 3/81 (3%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE---IQVGDEVDVALD 73 + G + G V ++ V+ + + + N + ++V V V + Sbjct: 279 DLNEGDVFEGEVKSLTNFGAFVEVADGIQGLVHVSEISNKHVDKPSDVLKVDQTVKVKVL 338 Query: 74 AVEDGFGETLLSREKAKRHEA 94 ++ LS + A + + Sbjct: 339 NIDPSDRRISLSIKAADSNAS 359 >UniRef50_A1AM10 SSU ribosomal protein S1P n=10 Tax=Desulfuromonadales RepID=A1AM10_PELPD Length = 407 Score = 301 bits (770), Expect = 6e-80, Method: Composition-based stats. Identities = 119/341 (34%), Positives = 192/341 (56%), Gaps = 5/341 (1%) Query: 5 FAQLFEESL--KEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEI 62 FAQLFEES K PG + V+ + + V +D G K E I ++F + +G + Sbjct: 20 FAQLFEESCSRKGGWLEPGQKLDVRVLKVSAEWVFIDCGQKGEGVIDRKEFLDQEGNCTV 79 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 + GD + + GE + LE A++ V G + ++KGG+ + Sbjct: 80 KEGDSISAYFLSSRQ--GEMRFTTRLGGGAAGNAQLEAAWQSGVPVEGQVEQEIKGGYQI 137 Query: 123 ELNG-IRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 L RAF P S + +R D L G L F++ + +K N+VVSRR ++E E Sbjct: 138 RLGSSTRAFCPFSQIALRRSDDHQSLVGSRLTFRITEYGEKGRNIVVSRRVLLEEEQQRM 197 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEI 241 R++ ++ EGM + G V +L D+GAFVD+GG++GL+ ++++ W RVK +E+++VG ++ Sbjct: 198 REEAWASISEGMTLDGTVSSLRDFGAFVDIGGLEGLVPLSEIGWSRVKDAAELLSVGQKV 257 Query: 242 TVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVE 301 V V D+ER R+SL +K+ DPW +A+++PEG+ +G V LT +G FV + G++ Sbjct: 258 QVVVKSLDQERNRISLSIKETLVDPWDQVAEQHPEGSFQSGTVARLTPFGAFVTLPCGLD 317 Query: 302 GLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRI 342 GL+H+S++ + HP +V++ G VEV V ID E RRI Sbjct: 318 GLIHISKLGGGKRISHPREVLSEGQAVEVKVEGIDRESRRI 358 Score = 181 bits (459), Expect = 7e-44, Method: Composition-based stats. Identities = 78/334 (23%), Positives = 148/334 (44%), Gaps = 17/334 (5%) Query: 189 LQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLK 247 L+ G ++ V ++ F+D G +G++ + + + V GD I+ L Sbjct: 35 LEPGQKLDVRVLKVSAEWVFIDCGQKGEGVIDRKEFLD---QEGNCTVKEGDSISAYFLS 91 Query: 248 FDRERTRVSLGLKQLGEDPW-VAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHV 306 + + + G + + G + G+V G + + Sbjct: 92 --SRQGEMRFTTRLGGGAAGNAQLEAAWQSGVPVEGQVEQEIKGGYQIRLGSSTRAFCPF 149 Query: 307 SEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLK----QCKANPWQQFAETHN 362 S++ + H S V G + + + E+ R I + + + + ++ + + Sbjct: 150 SQIALRRSDDHQSLV---GSRLTFRITEYGEKGRNIVVSRRVLLEEEQQRMREEAWASIS 206 Query: 363 KGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQV 422 +G ++G + S+ DFG F+ + GG++GLV LS+I W+ ++A G ++ VV + Sbjct: 207 EGMTLDGTVSSLRDFGAFVDI-GGLEGLVPLSEIGWSRV-KDAAELLSVGQKVQVVVKSL 264 Query: 423 DAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASE 482 D ER RISL +K+ DP++ + +G+ +G V + GA V L G++G + S+ Sbjct: 265 DQERNRISLSIKETLVDPWDQVAEQHPEGSFQSGTVARLTPFGAFVTLPCGLDGLIHISK 324 Query: 483 A-SRDRVEDATLVLSVGDEVEAKFTGVDRKNRAI 515 R+ VLS G VE K G+DR++R I Sbjct: 325 LGGGKRISHPREVLSEGQAVEVKVEGIDRESRRI 358 >UniRef50_P38494 30S ribosomal protein S1 homolog n=22 Tax=Bacillales RepID=RS1H_BACSU Length = 382 Score = 300 bits (769), Expect = 7e-80, Method: Composition-based stats. Identities = 131/366 (35%), Positives = 203/366 (55%), Gaps = 13/366 (3%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDA-GLKSESAIPAEQFKNAQGE 59 MTE Q + G +V+G+V ++ V V+ +K IP + + E Sbjct: 1 MTEEMNQ-----IDVQVPEVGDVVKGIVTKVEDKHVDVEIINVKQSGIIPISELSSLHVE 55 Query: 60 LE---IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKV 116 ++V DE+D+ + VED +LS+ AW LEK +E E + V Sbjct: 56 KASDVVKVDDELDLKVTKVEDDA--LILSKRAVDADRAWEDLEKKFETKEVFEAEVKDVV 113 Query: 117 KGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIES 176 KGG V++ G+R F+P SLV+ V D +GK L V++LD+ +N V++S RAV+ES Sbjct: 114 KGGLVVDI-GVRGFIPASLVEAHFVEDFTDYKGKTLSLLVVELDRDKNRVILSHRAVVES 172 Query: 177 ENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVN 236 E + ++ +LL++L+ G + G V+ LTD+GAFVD+GG+DGL+HI+ ++ V+ PS++V Sbjct: 173 EQANKKQELLQSLEVGSVLDGKVQRLTDFGAFVDIGGIDGLVHISQLSHSHVEKPSDVVE 232 Query: 237 VGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI 296 G E+ VKVL DR+ R+SL +K PW I ++ G L G V L +G FVEI Sbjct: 233 EGQEVKVKVLSVDRDNERISLSIKDTLPGPWNQIGEKVKPGDVLEGTVQRLVSFGAFVEI 292 Query: 297 EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQ 356 GVEGLVH+S++ + P +V+ G V+V VLD++E RISL +++ + P Sbjct: 293 LPGVEGLVHISQISNKHIGT-PHEVLEEGQTVKVKVLDVNENEERISLSMRELEETPKAD 351 Query: 357 FAETHN 362 + Sbjct: 352 QEDYRQ 357 Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 103/363 (28%), Positives = 175/363 (48%), Gaps = 16/363 (4%) Query: 190 QEGMEVKGIVKNLTDYGAFVDLGGV--DGLLHITDMAWKRVKHPSEIVNVGDEITVKVLK 247 + G VKGIV + D V++ V G++ I++++ V+ S++V V DE+ +KV K Sbjct: 14 EVGDVVKGIVTKVEDKHVDVEIINVKQSGIIPISELSSLHVEKASDVVKVDDELDLKVTK 73 Query: 248 FDRERTRVSLGLKQLGED-PWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHV 306 E + L + + D W + K++ V ++ G V+I GV G + Sbjct: 74 V--EDDALILSKRAVDADRAWEDLEKKFETKEVFEAEVKDVVKGGLVVDI--GVRGFIPA 129 Query: 307 SEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC----KANPWQQFAETHN 362 S + + + G + ++V+++D ++ R+ L + +AN Q+ ++ Sbjct: 130 S-LVEAHFVEDFTDY--KGKTLSLLVVELDRDKNRVILSHRAVVESEQANKKQELLQSLE 186 Query: 363 KGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQV 422 G ++GK++ +TDFG F+ + GGIDGLVH+S +S + E+ ++G E+ VL V Sbjct: 187 VGSVLDGKVQRLTDFGAFVDI-GGIDGLVHISQLSHSHV-EKPSDVVEEGQEVKVKVLSV 244 Query: 423 DAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASE 482 D + ERISL +K P+N K G ++ G V + + GA VE+ GVEG + S+ Sbjct: 245 DRDNERISLSIKDTLPGPWNQIGEKVKPGDVLEGTVQRLVSFGAFVEILPGVEGLVHISQ 304 Query: 483 ASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANF 542 S + VL G V+ K V+ ISLS+R +E + D Q Sbjct: 305 ISNKHIGTPHEVLEEGQTVKVKVLDVNENEERISLSMRELEETPKADQEDYRQYQAKEET 364 Query: 543 SNN 545 S Sbjct: 365 STG 367 Score = 53.0 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 3/90 (3%) Query: 445 VALNKKGAIVTGKVTAVDAKGATVELAD-GVEGYLRASEASRDRVEDATLVLSVGDEVEA 503 V + + G +V G VT V+ K VE+ + G + SE S VE A+ V+ V DE++ Sbjct: 10 VQVPEVGDVVKGIVTKVEDKHVDVEIINVKQSGIIPISELSSLHVEKASDVVKVDDELDL 69 Query: 504 KFTGVDRKNRAISLSVRAKDEADEKDAIAT 533 K T V ++ A+ LS RA D + + Sbjct: 70 KVTKV--EDDALILSKRAVDADRAWEDLEK 97 >UniRef50_C5NX49 30S ribosomal protein S1 n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NX49_9BACL Length = 402 Score = 299 bits (767), Expect = 1e-79, Method: Composition-based stats. Identities = 122/368 (33%), Positives = 194/368 (52%), Gaps = 23/368 (6%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDA-GLKSESAIPAEQFKN---A 56 MT SF +L S + G V G V ID D V VD G + + I Q Sbjct: 1 MTTSFEELLNSSEM---LKKGDKVTGTVSKIDNDKVYVDVAGAQYDCVILRNQITRKPFE 57 Query: 57 QGELEIQVGDEVDVALDAV--------EDGFGETLLSRE-------KAKRHEAWITLEKA 101 E + VGDEV+ + + ED G LS + K +W + + Sbjct: 58 NIEDVLSVGDEVEAQVTGIRADREKRSEDVPGVIYLSHKILENAEYKKLMELSWAGIIEK 117 Query: 102 YEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQ 161 +E+ E + ++G+ KGG ++ G+RAF+PGS +D + +D G E FK+ ++D+ Sbjct: 118 FENGELIQATVSGQTKGGLLADVEGLRAFIPGSYIDTKFRKDLSKFVGNEYTFKIEEVDK 177 Query: 162 KRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHIT 221 +N ++++RR ++E E + + ++ N+ EG ++G V +TD+GAFV++G VDGLLHI+ Sbjct: 178 SKNKIILNRRVILEEEKAKKLAEVYGNINEGDVIEGKVSRITDFGAFVNIGEVDGLLHIS 237 Query: 222 DMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLT 281 +++ RV+ +++++VGD I V V+ D+E +VSL K L W G L Sbjct: 238 EISHARVEKVADVLSVGDTIKVAVIAVDKENEKVSLSAKTLLPTQWEVARATIKAGDALE 297 Query: 282 GRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRR 341 G V N T +G FVE+ VEGLVH+S++ + + V+ GD V V VL+ D E R Sbjct: 298 GVVRNTTAFGAFVEVLPDVEGLVHISQISHE-RVTNVEDVLKKGDKVNVKVLEFDFENER 356 Query: 342 ISLGLKQC 349 +SL +K+ Sbjct: 357 LSLSIKEL 364 Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats. Identities = 102/358 (28%), Positives = 170/358 (47%), Gaps = 28/358 (7%) Query: 187 ENLQEGMEVKGIVKNLTDYGAFVDLGG--VDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 E L++G +V G V + + +VD+ G D ++ + K ++ ++++VGDE+ + Sbjct: 13 EMLKKGDKVTGTVSKIDNDKVYVDVAGAQYDCVILRNQITRKPFENIEDVLSVGDEVEAQ 72 Query: 245 VLKFDRERTR--------VSLGLK--------QLGEDPWVAIAKRYPEGTKLTGRVTNLT 288 V +R + + L K +L E W I +++ G + V+ T Sbjct: 73 VTGIRADREKRSEDVPGVIYLSHKILENAEYKKLMELSWAGIIEKFENGELIQATVSGQT 132 Query: 289 DYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLK- 347 G ++E G+ + S +D T SK V G+ + ++D+ + +I L + Sbjct: 133 KGGLLADVE-GLRAFIPGSYID-TKFRKDLSKFV--GNEYTFKIEEVDKSKNKIILNRRV 188 Query: 348 ---QCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEE 404 + KA + N+GD +EGK+ ITDFG F+ + G +DGL+H+S+IS + E+ Sbjct: 189 ILEEEKAKKLAEVYGNINEGDVIEGKVSRITDFGAFVNI-GEVDGLLHISEIS-HARVEK 246 Query: 405 AVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAK 464 GD I V+ VD E E++SL K L + A K G + G V A Sbjct: 247 VADVLSVGDTIKVAVIAVDKENEKVSLSAKTLLPTQWEVARATIKAGDALEGVVRNTTAF 306 Query: 465 GATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAK 522 GA VE+ VEG + S+ S +RV + VL GD+V K D +N +SLS++ Sbjct: 307 GAFVEVLPDVEGLVHISQISHERVTNVEDVLKKGDKVNVKVLEFDFENERLSLSIKEL 364 Score = 78.5 bits (192), Expect = 7e-13, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 65/164 (39%), Gaps = 8/164 (4%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE---IQVGDEVDVALD 73 G ++ G V I V+ G + + + +A+ E + VGD + VA+ Sbjct: 204 NINEGDVIEGKVSRITDFGAFVNIGE-VDGLLHISEISHARVEKVADVLSVGDTIKVAVI 262 Query: 74 AVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFLP 132 AV+ + LS K W + + + GV+ G VE+ + + Sbjct: 263 AVDKENEKVSLS-AKTLLPTQWEVARATIKAGDALEGVVRNTTAFGAFVEVLPDVEGLVH 321 Query: 133 GSLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRAVI 174 S + V + + +G ++ KV++ D + + +S + ++ Sbjct: 322 ISQISHERVTNVEDVLKKGDKVNVKVLEFDFENERLSLSIKELL 365 >UniRef50_D1BMA5 Hydroxymethylbutenyl pyrophosphate reductase n=3 Tax=Veillonella RepID=D1BMA5_VEIPT Length = 632 Score = 298 bits (763), Expect = 4e-79, Method: Composition-based stats. Identities = 111/353 (31%), Positives = 193/353 (54%), Gaps = 5/353 (1%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE 61 + FA+L +E E + G++V G VV ++ + V G K+E+ + + E Sbjct: 273 MKDFAELLAAEGQE-EFKKGNVVEGTVVQVEDERAYVSFGYKTEAILNRTEISYPAPESA 331 Query: 62 ---IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 ++ GDE+ + LS + + E W + +A E E + + Sbjct: 332 KDVLKNGDEIKAVIMNHIKEDNPIYLSMTRLAKDEDWQYVIEAQEKDEAIVCKGIDAIPA 391 Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 G V + +R F+P S DV V+ +L G E E KV+++D+K+N +V+SRRAV+E E Sbjct: 392 GLVVTVKSLRGFIPLSQGDVHFVKSLDNLVGTEFEAKVLEIDEKKNRLVLSRRAVLEVER 451 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVG 238 A+ + L+N+ G KGIV+ + YGAFVD+GG++GLLHI+D++W+++K ++++VG Sbjct: 452 QAKLAEALKNINVGENYKGIVRKIMPYGAFVDIGGIEGLLHISDISWQKIKKVEDVLSVG 511 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE 298 EI VK+ FD E ++SL LK L + PW + G + G+V L YG FV + + Sbjct: 512 QEIEVKLQSFDAESNKLSLSLKALSKSPWDVAEETLHVGDVINGKVVRLVAYGAFVAVND 571 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKA 351 ++GL+H+S++ +N +N G VEV ++ ++++ +++ L L + Sbjct: 572 DIQGLLHISQIT-KQRNAKVEDYLNRGQEVEVKIISLNKDEKKLGLALTELME 623 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 86/353 (24%), Positives = 167/353 (47%), Gaps = 12/353 (3%) Query: 187 ENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKV 245 E ++G V+G V + D A+V G + +L+ T++++ + +++ GDEI + Sbjct: 286 EEFKKGNVVEGTVVQVEDERAYVSFGYKTEAILNRTEISYPAPESAKDVLKNGDEIKAVI 345 Query: 246 LKFDRERTRVSLGLKQLGEDP-WVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLV 304 + +E + L + +L +D W + + + + + + G V ++ + G + Sbjct: 346 MNHIKEDNPIYLSMTRLAKDEDWQYVIEAQEKDEAIVCKGIDAIPAGLVVTVK-SLRGFI 404 Query: 305 HVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFA----ET 360 +S+ + + VG E VL+IDE++ R+ L + Q + Sbjct: 405 PLSQ--GDVHFVKSLDNL-VGTEFEAKVLEIDEKKNRLVLSRRAVLEVERQAKLAEALKN 461 Query: 361 HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL 420 N G+ +G ++ I +G F+ + GGI+GL+H+SDISW ++ G EI + Sbjct: 462 INVGENYKGIVRKIMPYGAFVDI-GGIEGLLHISDISWQKI-KKVEDVLSVGQEIEVKLQ 519 Query: 421 QVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRA 480 DAE ++SL +K L++ P++ G ++ GKV + A GA V + D ++G L Sbjct: 520 SFDAESNKLSLSLKALSKSPWDVAEETLHVGDVINGKVVRLVAYGAFVAVNDDIQGLLHI 579 Query: 481 SEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIAT 533 S+ ++ R L+ G EVE K +++ + + L++ E+ E A Sbjct: 580 SQITKQRNAKVEDYLNRGQEVEVKIISLNKDEKKLGLALTELMESKETAEDAE 632 Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats. Identities = 62/289 (21%), Positives = 120/289 (41%), Gaps = 11/289 (3%) Query: 258 GLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIH 317 +K E + + +G + G V + D +V E +++ +E+ + Sbjct: 272 TMKDFAELLAAEGQEEFKKGNVVEGTVVQVEDERAYVSFGYKTEAILNRTEISYPAPE-S 330 Query: 318 PSKVVNVGDVVEVMVLDIDEERRRISLGL-KQCKANPWQQFAETHNKGDRVEGKIKSITD 376 V+ GD ++ ++++ +E I L + + K WQ E K + + K Sbjct: 331 AKDVLKNGDEIKAVIMNHIKEDNPIYLSMTRLAKDEDWQYVIEAQEKDEAIVCKGIDAIP 390 Query: 377 FGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQL 436 G+ + + + G + LS + G E A VL++D ++ R+ L + + Sbjct: 391 AGLVVTV-KSLRGFIPLSQGDVHFVKSLDN---LVGTEFEAKVLEIDEKKNRLVLSRRAV 446 Query: 437 AE----DPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDAT 492 E + G G V + GA V++ G+EG L S+ S +++ Sbjct: 447 LEVERQAKLAEALKNINVGENYKGIVRKIMPYGAFVDIG-GIEGLLHISDISWQKIKKVE 505 Query: 493 LVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDAN 541 VLSVG E+E K D ++ +SLS++A ++ A T++ + N Sbjct: 506 DVLSVGQEIEVKLQSFDAESNKLSLSLKALSKSPWDVAEETLHVGDVIN 554 Score = 73.8 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 42/182 (23%), Positives = 74/182 (40%), Gaps = 10/182 (5%) Query: 9 FEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK---NAQGELEIQVG 65 E+LK I G +G+V I VD G E + + E + VG Sbjct: 455 LAEALKNINV--GENYKGIVRKIMPYGAFVDIGG-IEGLLHISDISWQKIKKVEDVLSVG 511 Query: 66 DEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN 125 E++V L + + + LS KA W E+ + + G + V G V +N Sbjct: 512 QEIEVKLQSFDAESNKLSLSL-KALSKSPWDVAEETLHVGDVINGKVVRLVAYGAFVAVN 570 Query: 126 G-IRAFLPGSLVDVRPVRDTLHLE--GKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 I+ L S + + G+E+E K+I L++ + ++ ++ES+ +AE Sbjct: 571 DDIQGLLHISQITKQRNAKVEDYLNRGQEVEVKIISLNKDEKKLGLALTELMESKETAED 630 Query: 183 DQ 184 + Sbjct: 631 AE 632 Score = 61.1 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 48/116 (41%) Query: 433 VKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDAT 492 +K AE KKG +V G V V+ + A V E L +E S E A Sbjct: 273 MKDFAELLAAEGQEEFKKGNVVEGTVVQVEDERAYVSFGYKTEAILNRTEISYPAPESAK 332 Query: 493 LVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMA 548 VL GDE++A +++ I LS+ + ++ + ++++A A Sbjct: 333 DVLKNGDEIKAVIMNHIKEDNPIYLSMTRLAKDEDWQYVIEAQEKDEAIVCKGIDA 388 >UniRef50_D1PP74 4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=8 Tax=Bacteria RepID=D1PP74_9FIRM Length = 639 Score = 296 bits (757), Expect = 2e-78, Method: Composition-based stats. Identities = 128/358 (35%), Positives = 198/358 (55%), Gaps = 12/358 (3%) Query: 1 MTESFAQ--LFEESLKEIETRP---GSIVRGVVVAIDKDVVLVDA-GLKSESAIPAEQFK 54 M+E FEE L E +P G IV+ V+++ +V G K + + Sbjct: 277 MSEEIRDDMSFEEMLAASEAKPLYAGKIVKAKVISVSPTECVVGIDGSKHTGVVTLREMS 336 Query: 55 ---NAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGV 111 NA+ E ++V DE+D+ + D G LSR + + + + +A E+ + G Sbjct: 337 HDPNAKMEDLVKVDDELDLVVVKTNDQEGVDTLSRVRFEAQKGMKDVAEAAENGTVMEGD 396 Query: 112 INGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRR 171 + KGG V + G+R F+P S +R D L G+ ++ + + +V S Sbjct: 397 VMEANKGGVVVNVKGVRVFVPRSQATMRRDEDYTKLVGQHVKLVITEC--AGRKIVGSIN 454 Query: 172 AVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHP 231 V N A+R++ N++ G + +G+VK+LT YGAFVD+GGVDGL HI++++W +KHP Sbjct: 455 KVTAEANKAKREEFWANVEVGKKYQGVVKSLTSYGAFVDIGGVDGLCHISELSWSNIKHP 514 Query: 232 SEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYG 291 SE+VNVGDEI V V +D E +VSLG K+ ++PWV + P GT+ T V ++T +G Sbjct: 515 SEVVNVGDEIEVYVKSYDPENQKVSLGYKKEEDNPWVKLENEVPVGTEFTAPVVSITKFG 574 Query: 292 CFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC 349 FV I G++GLVH+SE+ N S V+ VGD V V + ++D +R+RISL +K C Sbjct: 575 AFVRIMPGIDGLVHISEISNERVN-KVSDVLKVGDEVRVKLTNVDFDRKRISLSMKAC 631 Score = 208 bits (529), Expect = 6e-52, Method: Composition-based stats. Identities = 93/349 (26%), Positives = 162/349 (46%), Gaps = 15/349 (4%) Query: 189 LQEGMEVKGIVKNLTDYGAFVDLGG--VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVL 246 L G VK V +++ V + G G++ + +M+ ++V V DE+ + V+ Sbjct: 299 LYAGKIVKAKVISVSPTECVVGIDGSKHTGVVTLREMSHDPNAKMEDLVKVDDELDLVVV 358 Query: 247 KFDRERTRVSLG-LKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVH 305 K + + +L ++ + +A+ GT + G V V +GV V Sbjct: 359 KTNDQEGVDTLSRVRFEAQKGMKDVAEAAENGTVMEGDVMEANKG-GVVVNVKGVRVFVP 417 Query: 306 VSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETH---- 361 S+ ++ +K+V G V++++ + R+I + + A + E Sbjct: 418 RSQATM-RRDEDYTKLV--GQHVKLVITEC--AGRKIVGSINKVTAEANKAKREEFWANV 472 Query: 362 NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQ 421 G + +G +KS+T +G F+ + GG+DGL H+S++SW+ + GDEI V Sbjct: 473 EVGKKYQGVVKSLTSYGAFVDI-GGVDGLCHISELSWSNI-KHPSEVVNVGDEIEVYVKS 530 Query: 422 VDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRAS 481 D E +++SLG K+ ++P+ G T V ++ GA V + G++G + S Sbjct: 531 YDPENQKVSLGYKKEEDNPWVKLENEVPVGTEFTAPVVSITKFGAFVRIMPGIDGLVHIS 590 Query: 482 EASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDA 530 E S +RV + VL VGDEV K T VD + ISLS++A DE Sbjct: 591 EISNERVNKVSDVLKVGDEVRVKLTNVDFDRKRISLSMKACLNEDESAE 639 Score = 44.9 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 45/206 (21%), Positives = 81/206 (39%), Gaps = 11/206 (5%) Query: 331 MVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGI-DG 389 VL+ E R + ++ A A+ G V+ K+ S++ +G+DG G Sbjct: 272 EVLNSMSEEIRDDMSFEEMLA---ASEAKPLYAGKIVKAKVISVSPTECVVGIDGSKHTG 328 Query: 390 LVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLG-VKQLAEDPFNNWVALN 448 +V L ++S + + K DE+ VV++ + + +L V+ A+ + Sbjct: 329 VVTLREMSHD-PNAKMEDLVKVDDELDLVVVKTNDQEGVDTLSRVRFEAQKGMKDVAEAA 387 Query: 449 KKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGV 508 + G ++ G V + G GV ++ S+A+ R ED T + VG V+ T Sbjct: 388 ENGTVMEGDVMEANKGGVV-VNVKGVRVFVPRSQATMRRDEDYTKL--VGQHVKLVITEC 444 Query: 509 DRKNRAISLSVRAKDEADEKDAIATV 534 R I S+ K Sbjct: 445 --AGRKIVGSINKVTAEANKAKREEF 468 >UniRef50_UPI00017435B0 LytB protein n=1 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI00017435B0 Length = 413 Score = 296 bits (757), Expect = 2e-78, Method: Composition-based stats. Identities = 115/416 (27%), Positives = 225/416 (54%), Gaps = 10/416 (2%) Query: 123 ELNGIRAFLPGSLVDVRPVRDT--LHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 +L F+ S V V + + G E+ K+I+ D ++N + +S + + E A Sbjct: 2 DLGAASGFVHISEVSWDQVDNLHERYKIGDEVTAKIIEKDVEKNRLKLSIKQLSEDPWIA 61 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 + G V+ +VK++ D+G V + G G +H++++AW + GD+ Sbjct: 62 ----FENSHNVGDVVEAVVKDVLDFGIVVTVDGNSGFVHVSELAWHNGSKELKNYKAGDK 117 Query: 241 ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV 300 + K+++ + E+ V L +KQL E+PW + ++Y G + +T + D+G + +E+ + Sbjct: 118 FSAKIIQIENEKKNVKLSVKQLSENPWNTVKEKYHIGDIIEKPITEVFDFGLLISLEKDI 177 Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAET 360 +GL+HVS++ + ++ SK GD+++ ++D ++E+ R++L +K + W ET Sbjct: 178 DGLLHVSDLSYKRESNLTSK-YKAGDLIKFKIVDFNDEKNRVTLSVKALLDDKWDVLEET 236 Query: 361 HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL 420 ++ +GK+ ++ D+GIF+ L+ GI+ +H ++ SW+ + +EYK GDE+ V+ Sbjct: 237 YDFDKSYKGKVMNVQDYGIFVELEKGIEVFIHKNEFSWD---KREHKEYKVGDEVEFKVI 293 Query: 421 QVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRA 480 +D +++S +KQL + P+ KKG IV ++ + A V+L D G + Sbjct: 294 VIDKIEKKLSGSIKQLEKSPWKEVTEKYKKGNIVNTEIVEIQENFALVKLTDRFNGIVPK 353 Query: 481 SEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNK 536 E + D ++D + SVGD+VEA T ++ K ++I+LS++ E +EK + + K Sbjct: 354 RELTEDFLKDISEKFSVGDKVEAVITDINEKRKSIALSLKKVQEMEEKKELDELMK 409 Score = 261 bits (667), Expect = 5e-68, Method: Composition-based stats. Identities = 110/342 (32%), Positives = 177/342 (51%), Gaps = 5/342 (1%) Query: 210 DLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVA 269 DLG G +HI++++W +V + E +GDE+T K+++ D E+ R+ L +KQL EDPW+A Sbjct: 2 DLGAASGFVHISEVSWDQVDNLHERYKIGDEVTAKIIEKDVEKNRLKLSIKQLSEDPWIA 61 Query: 270 IAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVE 329 + G + V ++ D+G V + +G G VHVSE+ W N K GD Sbjct: 62 FENSHNVGDVVEAVVKDVLDFGIVVTV-DGNSGFVHVSELAWHN-GSKELKNYKAGDKFS 119 Query: 330 VMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDG 389 ++ I+ E++ + L +KQ NPW E ++ GD +E I + DFG+ I L+ IDG Sbjct: 120 AKIIQIENEKKNVKLSVKQLSENPWNTVKEKYHIGDIIEKPITEVFDFGLLISLEKDIDG 179 Query: 390 LVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNK 449 L+H+SD+S+ +YK GD I ++ + E+ R++L VK L +D ++ Sbjct: 180 LLHVSDLSYKRES-NLTSKYKAGDLIKFKIVDFNDEKNRVTLSVKALLDDKWDVLEETYD 238 Query: 450 KGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVD 509 GKV V G VEL G+E ++ +E S D+ E VGDEVE K +D Sbjct: 239 FDKSYKGKVMNVQDYGIFVELEKGIEVFIHKNEFSWDKREH--KEYKVGDEVEFKVIVID 296 Query: 510 RKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAF 551 + + +S S++ +++ K+ K N + E F Sbjct: 297 KIEKKLSGSIKQLEKSPWKEVTEKYKKGNIVNTEIVEIQENF 338 Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats. Identities = 100/418 (23%), Positives = 204/418 (48%), Gaps = 16/418 (3%) Query: 39 DAGLKSESAIPAEQFKNAQGE---LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAW 95 D G + + + Q + ++GDEV + + LS ++ + W Sbjct: 2 DLGA-ASGFVHISEVSWDQVDNLHERYKIGDEVTAKIIEKDVEKNRLKLSIKQL-SEDPW 59 Query: 96 ITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDT--LHLEGKELE 153 I E ++ + V V+ + G V ++G F+ S + + G + Sbjct: 60 IAFENSHNVGDVVEAVVKDVLDFGIVVTVDGNSGFVHVSELAWHNGSKELKNYKAGDKFS 119 Query: 154 FKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG- 212 K+I+++ ++ NV +S + + E+ + +++ G ++ + + D+G + L Sbjct: 120 AKIIQIENEKKNVKLSVKQLSENPWNTVKEKY----HIGDIIEKPITEVFDFGLLISLEK 175 Query: 213 GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAK 272 +DGLLH++D+++KR + + GD I K++ F+ E+ RV+L +K L +D W + + Sbjct: 176 DIDGLLHVSDLSYKRESNLTSKYKAGDLIKFKIVDFNDEKNRVTLSVKALLDDKWDVLEE 235 Query: 273 RYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMV 332 Y G+V N+ DYG FVE+E+G+E +H +E W + K VGD VE V Sbjct: 236 TYDFDKSYKGKVMNVQDYGIFVELEKGIEVFIHKNEFSWDKRE---HKEYKVGDEVEFKV 292 Query: 333 LDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVH 392 + ID+ +++S +KQ + +PW++ E + KG+ V +I I + + L +G+V Sbjct: 293 IVIDKIEKKLSGSIKQLEKSPWKEVTEKYKKGNIVNTEIVEIQENFALVKLTDRFNGIVP 352 Query: 393 LSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKK 450 +++ + ++ ++ GD++ AV+ ++ +R+ I+L +K++ E + K Sbjct: 353 KRELTEDFL-KDISEKFSVGDKVEAVITDINEKRKSIALSLKKVQEMEEKKELDELMK 409 Score = 164 bits (416), Expect = 7e-39, Method: Composition-based stats. Identities = 80/344 (23%), Positives = 158/344 (45%), Gaps = 16/344 (4%) Query: 15 EIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE---IQVGDEVDVA 71 E G +V VV + ++V S + + G E + GD+ Sbjct: 63 ENSHNVGDVVEAVVKDVLDFGIVVTVDGNS-GFVHVSELAWHNGSKELKNYKAGDKFSAK 121 Query: 72 LDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNG-IRAF 130 + +E+ LS ++ + W T+++ Y + + I G + L I Sbjct: 122 IIQIENEKKNVKLSVKQLSENP-WNTVKEKYHIGDIIEKPITEVFDFGLLISLEKDIDGL 180 Query: 131 LPGSLVDVRPVRDT--LHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLEN 188 L S + + + + G ++FK++ + ++N V +S +A+++ + D L E Sbjct: 181 LHVSDLSYKRESNLTSKYKAGDLIKFKIVDFNDEKNRVTLSVKALLDD----KWDVLEET 236 Query: 189 LQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLK 247 KG V N+ DYG FV+L G++ +H + +W + +H + VGDE+ KV+ Sbjct: 237 YDFDKSYKGKVMNVQDYGIFVELEKGIEVFIHKNEFSWDKREH--KEYKVGDEVEFKVIV 294 Query: 248 FDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVS 307 D+ ++S +KQL + PW + ++Y +G + + + + V++ + G+V Sbjct: 295 IDKIEKKLSGSIKQLEKSPWKEVTEKYKKGNIVNTEIVEIQENFALVKLTDRFNGIVPKR 354 Query: 308 EMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKA 351 E+ + S+ +VGD VE ++ DI+E+R+ I+L LK+ + Sbjct: 355 ELT-EDFLKDISEKFSVGDKVEAVITDINEKRKSIALSLKKVQE 397 Score = 73.5 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 73/167 (43%), Gaps = 5/167 (2%) Query: 25 RGVVVAIDKDVVLVDAGLKSESAIPAEQFK-NAQGELEIQVGDEVDVALDAVEDGFGETL 83 +G V+ + + V+ E I +F + + E +VGDEV+ + ++ + Sbjct: 244 KGKVMNVQDYGIFVELEKGIEVFIHKNEFSWDKREHKEYKVGDEVEFKVIVIDKIEKKLS 303 Query: 84 LSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL-NGIRAFLPGSLVDVRPVR 142 S ++ ++ W + + Y+ V I + V+L + +P + ++ Sbjct: 304 GSIKQLEKSP-WKEVTEKYKKGNIVNTEIVEIQENFALVKLTDRFNGIVPKRELTEDFLK 362 Query: 143 DTLHL--EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLE 187 D G ++E + +++KR ++ +S + V E E E D+L++ Sbjct: 363 DISEKFSVGDKVEAVITDINEKRKSIALSLKKVQEMEEKKELDELMK 409 Score = 48.4 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 37/90 (41%), Gaps = 3/90 (3%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQGELEIQVGDEVDVALD 73 + + G+IV +V I ++ LV + +P + + VGD+V+ + Sbjct: 320 KYKKGNIVNTEIVEIQENFALVKLTDRFNGIVPKRELTEDFLKDISEKFSVGDKVEAVIT 379 Query: 74 AVEDGFGETLLSREKAKRHEAWITLEKAYE 103 + + LS +K + E L++ + Sbjct: 380 DINEKRKSIALSLKKVQEMEEKKELDELMK 409 >UniRef50_Q7UWH7 30S ribosomal protein S1 n=1 Tax=Rhodopirellula baltica RepID=Q7UWH7_RHOBA Length = 560 Score = 296 bits (757), Expect = 2e-78, Method: Composition-based stats. Identities = 109/335 (32%), Positives = 183/335 (54%), Gaps = 10/335 (2%) Query: 20 PGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGF 79 G+ V V+ I +D V V G E +P EQF E E G ++V + + Sbjct: 190 EGARVHAQVIKIHQDNVFVSLGGPDEGTVPFEQFT----EEEPTPGQSIEVIVRGINSED 245 Query: 80 GETLLSRE-KAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDV 138 G S KA W + ++ V I G GG ++ +R F+P S + Sbjct: 246 GLFSCSLPGKATEVSDWDDI----DEGSVVEATITGHNNGGLECKVGSVRGFMPISQISE 301 Query: 139 RPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGI 198 V D +++ V + + +R N+V+SRRA++E E +R + LE ++ G ++G+ Sbjct: 302 YRVEDCSEFVDQKMVCLVTEANARRGNLVLSRRAILEREREVKRQEQLEKIEPGDILEGV 361 Query: 199 VKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLG 258 V+++ D+GAFVD+GG+DGL+H++ ++W+R+KHPSE++ G + V+V K D++ ++SL Sbjct: 362 VRSVRDFGAFVDVGGLDGLIHVSKLSWERIKHPSEVIEEGQNVKVRVDKIDKQTGKMSLT 421 Query: 259 LKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHP 318 + L E+PW + + G+ G VT ++G FV + GVEGL H+SE+ T++ Sbjct: 422 YRDLLENPWDSAESMFAVGSVHKGEVTRTAEFGAFVRLTAGVEGLCHISELA-THRVSRV 480 Query: 319 SKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP 353 S VVNVGD V+V ++ D + +++ L +K A P Sbjct: 481 SSVVNVGDEVDVKIMSFDRDSQKVGLSIKAAHAKP 515 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 90/350 (25%), Positives = 151/350 (43%), Gaps = 24/350 (6%) Query: 187 ENLQEGMEVKGIVKNLTDYGAFVDLGGVD-GLLHITDMAWKRVKHPSEIVNVGDEITVKV 245 E L EG V V + FV LGG D G + E G I V V Sbjct: 186 EPLGEGARVHAQVIKIHQDNVFVSLGGPDEGTVPFEQFT-------EEEPTPGQSIEVIV 238 Query: 246 LKFDRERTRVSLGL--KQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGL 303 + E S L K W I EG+ + +T + G ++ V G Sbjct: 239 RGINSEDGLFSCSLPGKATEVSDWDDID----EGSVVEATITGHNNGGLECKVG-SVRGF 293 Query: 304 VHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQ----QFAE 359 + +S++ V + +V + + R + L + + + E Sbjct: 294 MPISQISEYRVEDCSEFV---DQKMVCLVTEANARRGNLVLSRRAILEREREVKRQEQLE 350 Query: 360 THNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVV 419 GD +EG ++S+ DFG F+ + GG+DGL+H+S +SW + ++G + V Sbjct: 351 KIEPGDILEGVVRSVRDFGAFVDV-GGLDGLIHVSKLSWERI-KHPSEVIEEGQNVKVRV 408 Query: 420 LQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLR 479 ++D + ++SL + L E+P+++ ++ G++ G+VT GA V L GVEG Sbjct: 409 DKIDKQTGKMSLTYRDLLENPWDSAESMFAVGSVHKGEVTRTAEFGAFVRLTAGVEGLCH 468 Query: 480 ASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKD 529 SE + RV + V++VGDEV+ K DR ++ + LS++A + Sbjct: 469 ISELATHRVSRVSSVVNVGDEVDVKIMSFDRDSQKVGLSIKAAHAKPAAE 518 Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats. Identities = 63/258 (24%), Positives = 115/258 (44%), Gaps = 14/258 (5%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQ-VGDEVDVALDAV 75 + GS+V + + + G +P Q + E + V ++ + Sbjct: 264 DIDEGSVVEATITGHNNGGLECKVGS-VRGFMPISQISEYRVEDCSEFVDQKMVCLVTEA 322 Query: 76 EDGFGETLLSRE----KAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFL 131 G +LSR + + + LEK E + + GV+ G V++ G+ + Sbjct: 323 NARRGNLVLSRRAILEREREVKRQEQLEKI-EPGDILEGVVRSVRDFGAFVDVGGLDGLI 381 Query: 132 PGSLVDVRPVRDTLHLE--GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENL 189 S + ++ + G+ ++ +V K+D++ + ++ R ++E+ D Sbjct: 382 HVSKLSWERIKHPSEVIEEGQNVKVRVDKIDKQTGKMSLTYRDLLEN----PWDSAESMF 437 Query: 190 QEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKF 248 G KG V ++GAFV L GV+GL HI+++A RV S +VNVGDE+ VK++ F Sbjct: 438 AVGSVHKGEVTRTAEFGAFVRLTAGVEGLCHISELATHRVSRVSSVVNVGDEVDVKIMSF 497 Query: 249 DRERTRVSLGLKQLGEDP 266 DR+ +V L +K P Sbjct: 498 DRDSQKVGLSIKAAHAKP 515 Score = 76.9 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 33/174 (18%), Positives = 63/174 (36%), Gaps = 8/174 (4%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE---IQVGDEVDVALD 73 + PG I+ GVV ++ VD G + I + + + I+ G V V +D Sbjct: 351 KIEPGDILEGVVRSVRDFGAFVDVGG-LDGLIHVSKLSWERIKHPSEVIEEGQNVKVRVD 409 Query: 74 AVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFLP 132 ++ G+ L+ W + E + G + + G V L G+ Sbjct: 410 KIDKQTGKMSLTYRDL-LENPWDSAESMFAVGSVHKGEVTRTAEFGAFVRLTAGVEGLCH 468 Query: 133 GSLVDVR--PVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQ 184 S + ++ G E++ K++ D+ V +S +A + Q Sbjct: 469 ISELATHRVSRVSSVVNVGDEVDVKIMSFDRDSQKVGLSIKAAHAKPAAEGEKQ 522 >UniRef50_A7G2Q4 Ribosomal protein S1 n=13 Tax=Clostridium RepID=A7G2Q4_CLOBH Length = 387 Score = 295 bits (756), Expect = 3e-78, Method: Composition-based stats. Identities = 123/372 (33%), Positives = 231/372 (62%), Gaps = 7/372 (1%) Query: 1 MTES--FAQLFEESLKEIE-TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ 57 M+E + EE ++ G +++G V+++ +++ G S+ +P ++ + + Sbjct: 1 MSEEITMKDMMEEINSSMKRIHKGELLKGKVISVSDKEAVLNIGYISDGILPKKEVVDNE 60 Query: 58 G---ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVING 114 + I D + V + V DG G LLS++KA+ EAW LEKA+++ E + + Sbjct: 61 EVNLKDIISKDDVISVCVLEVNDGEGNVLLSKKKAEIIEAWSKLEKAFKNEEILEIKVEE 120 Query: 115 KVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVI 174 +KGG + GIR F+P S +D + V+D +G+ ++ ++I+LD+++ +V+S R V Sbjct: 121 IIKGGAIGHIQGIRVFIPASQIDNKYVKDLNVFKGEMVKGRLIELDKQKRKIVLSSRVVK 180 Query: 175 ESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEI 234 E E + +++LL +L++G +++G+V+ L +GAFVD+GG+DGL+H + ++W RV HPSE+ Sbjct: 181 EEEEAKRKEELLNSLEKGQKIEGVVRRLEKFGAFVDIGGMDGLVHNSQLSWGRVNHPSEV 240 Query: 235 VNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFV 294 V++GD++ V VL FD++ +++L LK + +DPW + +Y G+ + G + L ++G FV Sbjct: 241 VSIGDKVEVYVLDFDKDTKKIALSLKDVKKDPWNTVKDKYAVGSVIEGTIVKLLNFGAFV 300 Query: 295 EIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPW 354 E+E G+EGLVH+SE+ + PS+ +N+GD V+V VL+++ + +R+SL +K+ P Sbjct: 301 EVENGIEGLVHISEITDEH-IAKPSEKLNIGDKVKVKVLEVNSDEKRMSLSIKEATEKPK 359 Query: 355 QQFAETHNKGDR 366 + F++ + + Sbjct: 360 EDFSKYDDSKEE 371 Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats. Identities = 92/388 (23%), Positives = 194/388 (50%), Gaps = 12/388 (3%) Query: 172 AVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKH 230 + + E + ++ + +G +KG V +++D A +++G + DG+L ++ + Sbjct: 4 EITMKDMMEEINSSMKRIHKGELLKGKVISVSDKEAVLNIGYISDGILPKKEVVDNEEVN 63 Query: 231 PSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGE-DPWVAIAKRYPEGTKLTGRVTNLTD 289 +I++ D I+V VL+ + V L K+ + W + K + L +V + Sbjct: 64 LKDIISKDDVISVCVLEVNDGEGNVLLSKKKAEIIEAWSKLEKAFKNEEILEIKVEEIIK 123 Query: 290 YGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLK-- 347 G I+ G+ + S++D NK + V G++V+ ++++D+++R+I L + Sbjct: 124 GGAIGHIQ-GIRVFIPASQID--NKYVKDLNVFK-GEMVKGRLIELDKQKRKIVLSSRVV 179 Query: 348 --QCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEA 405 + +A ++ + KG ++EG ++ + FG F+ + GG+DGLVH S +SW Sbjct: 180 KEEEEAKRKEELLNSLEKGQKIEGVVRRLEKFGAFVDI-GGMDGLVHNSQLSWGRVN-HP 237 Query: 406 VREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKG 465 GD++ VL D + ++I+L +K + +DP+N G+++ G + + G Sbjct: 238 SEVVSIGDKVEVYVLDFDKDTKKIALSLKDVKKDPWNTVKDKYAVGSVIEGTIVKLLNFG 297 Query: 466 ATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEA 525 A VE+ +G+EG + SE + + + + L++GD+V+ K V+ + +SLS++ E Sbjct: 298 AFVEVENGIEGLVHISEITDEHIAKPSEKLNIGDKVKVKVLEVNSDEKRMSLSIKEATEK 357 Query: 526 DEKDAIATVNKQEDANFSNNAMAEAFKA 553 ++D + +E+ + + FK Sbjct: 358 PKEDFSKYDDSKEEDVTLGDLFGDKFKD 385 >UniRef50_B0KVD5 30S ribosomal protein S1 n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVD5_9BACT Length = 414 Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats. Identities = 117/382 (30%), Positives = 203/382 (53%), Gaps = 27/382 (7%) Query: 8 LFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE-IQVGD 66 L ++ L+ + R G +V GVVV + + +LVD G KSE I + A + IQVG+ Sbjct: 18 LTDKDLQMKQFRLGDMVEGVVVNVSHEEILVDIGAKSEGIITRLELSEADKSYKNIQVGE 77 Query: 67 EVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNG 126 ++ + E+ G +LS +KA++ + W E+A+E + + KGG + G Sbjct: 78 KITAKVVQTENAQGYVVLSLKKAEKDKKWQDAEEAFEKGLIIDATVIEYNKGGLLCDSLG 137 Query: 127 IRAFLPGSLVD-VRPVRDTLHL---------------EGKELEFKVIKLDQKRNNVVVSR 170 +R F+P S +D V D GK L KVI++D+++N V+S Sbjct: 138 LRGFIPLSHLDRVHFANDVAKFAAGSEAELKESLKILSGKTLRVKVIEIDKEKNRFVLSE 197 Query: 171 RAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKH 230 + + + + R + L ++ G V+GIV + +G FVDL GV+GL+HI+++AW++V H Sbjct: 198 KDALATYSEESRKKRLSEIKIGSTVEGIVTGIMPFGVFVDLDGVEGLVHISEIAWEKVSH 257 Query: 231 PSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDY 290 PS VG +I V VL D E +++L +K+L +PW + ++YP GTK+TG V+ + + Sbjct: 258 PSNYFKVGQKIKVMVLGVDEESNKLALSVKKLIPNPWETVEEKYPVGTKVTGVVSKIVPF 317 Query: 291 GCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCK 350 G FV +E+G++GL+H+SE + G+ V +V+ +D E ++++L ++ Sbjct: 318 GAFVTLEKGLDGLIHISE---------AEAPLKEGETVSAVVIQVDGENQKLALSTREHN 368 Query: 351 -ANPWQQFAETHNKGDRVEGKI 371 N + E D ++ + Sbjct: 369 FDNEKDKVKEKSKDKDPIDKSV 390 Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 101/391 (25%), Positives = 183/391 (46%), Gaps = 32/391 (8%) Query: 168 VSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWK 226 + ++ S+ ++D ++ + G V+G+V N++ VD+G +G++ +++ Sbjct: 7 IQKKESAMSKYLTDKDLQMKQFRLGDMVEGVVVNVSHEEILVDIGAKSEGIITRLELSEA 66 Query: 227 RVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDP-WVAIAKRYPEGTKLTGRVT 285 + + VG++IT KV++ + + V L LK+ +D W + + +G + V Sbjct: 67 --DKSYKNIQVGEKITAKVVQTENAQGYVVLSLKKAEKDKKWQDAEEAFEKGLIIDATVI 124 Query: 286 NLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKV-------------VNVGDVVEVMV 332 G + G+ G + +S +D + +K + G + V V Sbjct: 125 EYNKGGLLCD-SLGLRGFIPLSHLDRVHFANDVAKFAAGSEAELKESLKILSGKTLRVKV 183 Query: 333 LDIDEERRRISLGLKQCKANPWQQFAET----HNKGDRVEGKIKSITDFGIFIGLDGGID 388 ++ID+E+ R L K A ++ + G VEG + I FG+F+ LD G++ Sbjct: 184 IEIDKEKNRFVLSEKDALATYSEESRKKRLSEIKIGSTVEGIVTGIMPFGVFVDLD-GVE 242 Query: 389 GLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALN 448 GLVH+S+I+W +K G +I +VL VD E +++L VK+L +P+ Sbjct: 243 GLVHISEIAWEKVS-HPSNYFKVGQKIKVMVLGVDEESNKLALSVKKLIPNPWETVEEKY 301 Query: 449 KKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGV 508 G VTG V+ + GA V L G++G + SE A L G+ V A V Sbjct: 302 PVGTKVTGVVSKIVPFGAFVTLEKGLDGLIHISE--------AEAPLKEGETVSAVVIQV 353 Query: 509 DRKNRAISLSVRAKDEADEKDAIATVNKQED 539 D +N+ ++LS R + +EKD + +K +D Sbjct: 354 DGENQKLALSTREHNFDNEKDKVKEKSKDKD 384 Score = 187 bits (476), Expect = 7e-46, Method: Composition-based stats. Identities = 91/377 (24%), Positives = 171/377 (45%), Gaps = 34/377 (9%) Query: 102 YEDAETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLD 160 + + V GV+ V++ + + G+++ KV++ + Sbjct: 28 FRLGDMVEGVVVNVSHEEILVDIGAKSEGIITRLELSEADKSYKNIQVGEKITAKVVQTE 87 Query: 161 QKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHI 220 + VV+S + + + + ++ E G+ + V G D G+ G + + Sbjct: 88 NAQGYVVLSLKKAEKDKKWQDAEEAFEK---GLIIDATVIEYNKGGLLCDSLGLRGFIPL 144 Query: 221 TDMAWKRVKH------------PSEIVNV--GDEITVKVLKFDRERTRVSLGLKQL---- 262 + + + E + + G + VKV++ D+E+ R L K Sbjct: 145 SHLDRVHFANDVAKFAAGSEAELKESLKILSGKTLRVKVIEIDKEKNRFVLSEKDALATY 204 Query: 263 GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVV 322 E+ G+ + G VT + +G FV++ +GVEGLVH+SE+ W K HPS Sbjct: 205 SEESRKKRLSEIKIGSTVEGIVTGIMPFGVFVDL-DGVEGLVHISEIAWE-KVSHPSNYF 262 Query: 323 NVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIG 382 VG ++VMVL +DEE +++L +K+ NPW+ E + G +V G + I FG F+ Sbjct: 263 KVGQKIKVMVLGVDEESNKLALSVKKLIPNPWETVEEKYPVGTKVTGVVSKIVPFGAFVT 322 Query: 383 LDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLA-EDPF 441 L+ G+DGL+H+S+ A K+G+ ++AVV+QVD E ++++L ++ ++ Sbjct: 323 LEKGLDGLIHISE---------AEAPLKEGETVSAVVIQVDGENQKLALSTREHNFDNEK 373 Query: 442 NNWVALNKKGAIVTGKV 458 + +K + V Sbjct: 374 DKVKEKSKDKDPIDKSV 390 >UniRef50_D1CBU2 RNA binding S1 domain protein n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CBU2_THET1 Length = 431 Score = 291 bits (746), Expect = 3e-77, Method: Composition-based stats. Identities = 122/344 (35%), Positives = 198/344 (57%), Gaps = 18/344 (5%) Query: 18 TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK--NAQGELEIQVGDEVDVALDAV 75 IV GVV+ D ++VD G KSE +PA + + + + ++ G + V++ Sbjct: 76 LHRNEIVDGVVMGFDNGDLIVDVGGKSEGIVPASELTTLSEEEKESLEPGQPIVVSVLNA 135 Query: 76 -EDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGS 134 ED G +LS ++A+ W L++ E E V + G KGG V+L G+R F+P S Sbjct: 136 SEDNEGRIVLSVDRARAERLWRELQQKLETGEIVDCKVVGYNKGGLLVDLGGLRGFIPSS 195 Query: 135 LV-------DVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLE 187 + D + +L G+ L+ KVI++++KRN +++S R + +++L+E Sbjct: 196 QISFLVSSNDADRQSELANLVGRTLQAKVIEVNRKRNRLILSERIATQERKETSKERLIE 255 Query: 188 NLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLK 247 L+EG VKG V +L D+GAFVD+GG DGL+H+++++W R+ HPSE++ GDE+ V VL Sbjct: 256 ELREGQIVKGRVTSLADFGAFVDIGGADGLIHLSEISWGRINHPSEVLKPGDEVDVMVLN 315 Query: 248 FDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVS 307 DRE +++L +K+ +PW +RY G + G VT + +G FV +E+G+EGLVH+S Sbjct: 316 IDREHKKIALSMKRTQPEPWATAMERYDVGQIVEGEVTQIAPFGVFVRLEDGIEGLVHMS 375 Query: 308 EMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKA 351 E+ T V VGD + + V+ +D +RRRI L ++Q Sbjct: 376 ELGDTK--------VQVGDKLRLRVIKMDTQRRRIGLSVRQLDE 411 Score = 217 bits (554), Expect = 7e-55, Method: Composition-based stats. Identities = 96/369 (26%), Positives = 170/369 (46%), Gaps = 22/369 (5%) Query: 169 SRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKR 227 + + A + L V G+V + VD+GG +G++ +++ Sbjct: 56 PEEDITMEDILASGEADYRTLHRNEIVDGVVMGFDNGDLIVDVGGKSEGIVPASELT-TL 114 Query: 228 VKHPSEIVNVGDEITVKVLKFDRER-TRVSLGL-KQLGEDPWVAIAKRYPEGTKLTGRVT 285 + E + G I V VL + R+ L + + E W + ++ G + +V Sbjct: 115 SEEEKESLEPGQPIVVSVLNASEDNEGRIVLSVDRARAERLWRELQQKLETGEIVDCKVV 174 Query: 286 NLTDYGCFVEIEEGVEGLVHVSEMDW---TNKNIHPSKVVN-VGDVVEVMVLDIDEERRR 341 G V++ + S++ + +N S++ N VG ++ V++++ +R R Sbjct: 175 GYNKGGLLVDLGGLRG-FIPSSQISFLVSSNDADRQSELANLVGRTLQAKVIEVNRKRNR 233 Query: 342 ISLGLK----QCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDIS 397 + L + + K ++ E +G V+G++ S+ DFG F+ + GG DGL+HLS+IS Sbjct: 234 LILSERIATQERKETSKERLIEELREGQIVKGRVTSLADFGAFVDI-GGADGLIHLSEIS 292 Query: 398 WNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGK 457 W K GDE+ +VL +D E ++I+L +K+ +P+ + G IV G+ Sbjct: 293 WGRIN-HPSEVLKPGDEVDVMVLNIDREHKKIALSMKRTQPEPWATAMERYDVGQIVEGE 351 Query: 458 VTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISL 517 VT + G V L DG+EG + SE +V VGD++ + +D + R I L Sbjct: 352 VTQIAPFGVFVRLEDGIEGLVHMSELGDTKV-------QVGDKLRLRVIKMDTQRRRIGL 404 Query: 518 SVRAKDEAD 526 SVR DE D Sbjct: 405 SVRQLDEPD 413 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 104/345 (30%), Positives = 177/345 (51%), Gaps = 23/345 (6%) Query: 105 AETVTGVINGKVKGGFTVELNG-IRAFLPGSLVDVRPVRDTLHL-EGKELEFKVIKLDQK 162 E V GV+ G G V++ G +P S + + L G+ + V+ + Sbjct: 79 NEIVDGVVMGFDNGDLIVDVGGKSEGIVPASELTTLSEEEKESLEPGQPIVVSVLNASED 138 Query: 163 RNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITD 222 +V +V + +L + L+ G V V G VDLGG+ G + + Sbjct: 139 NEGRIVL--SVDRARAERLWRELQQKLETGEIVDCKVVGYNKGGLLVDLGGLRGFIPSSQ 196 Query: 223 MAWKRVKHPSEIVN-----VGDEITVKVLKFDRERTRVSLGLK----QLGEDPWVAIAKR 273 +++ + ++ + VG + KV++ +R+R R+ L + + E + + Sbjct: 197 ISFLVSSNDADRQSELANLVGRTLQAKVIEVNRKRNRLILSERIATQERKETSKERLIEE 256 Query: 274 YPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVL 333 EG + GRVT+L D+G FV+I G +GL+H+SE+ W N HPS+V+ GD V+VMVL Sbjct: 257 LREGQIVKGRVTSLADFGAFVDIG-GADGLIHLSEISWGRIN-HPSEVLKPGDEVDVMVL 314 Query: 334 DIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHL 393 +ID E ++I+L +K+ + PW E ++ G VEG++ I FG+F+ L+ GI+GLVH+ Sbjct: 315 NIDREHKKIALSMKRTQPEPWATAMERYDVGQIVEGEVTQIAPFGVFVRLEDGIEGLVHM 374 Query: 394 SDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAE 438 S++ + GD++ V+++D +R RI L V+QL E Sbjct: 375 SELGDTKV--------QVGDKLRLRVIKMDTQRRRIGLSVRQLDE 411 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 67/291 (23%), Positives = 130/291 (44%), Gaps = 14/291 (4%) Query: 268 VAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDV 327 A + + G V + V++ EG+V SE+ T + + + G Sbjct: 70 EADYRTLHRNEIVDGVVMGFDNGDLIVDVGGKSEGIVPASEL--TTLSEEEKESLEPGQP 127 Query: 328 VEVMVLDIDEER-RRISLGLKQCKANP-WQQFAETHNKGDRVEGKIKSITDFGIFIGLDG 385 + V VL+ E+ RI L + + +A W++ + G+ V+ K+ G+ + L G Sbjct: 128 IVVSVLNASEDNEGRIVLSVDRARAERLWRELQQKLETGEIVDCKVVGYNKGGLLVDLGG 187 Query: 386 GIDGLVHLSDISWNVAGEEAVREYK----KGDEIAAVVLQVDAERERISLGVKQLAED-- 439 + S IS+ V+ +A R+ + G + A V++V+ +R R+ L + ++ Sbjct: 188 LRG-FIPSSQISFLVSSNDADRQSELANLVGRTLQAKVIEVNRKRNRLILSERIATQERK 246 Query: 440 --PFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSV 497 + ++G IV G+VT++ GA V++ G +G + SE S R+ + VL Sbjct: 247 ETSKERLIEELREGQIVKGRVTSLADFGAFVDIG-GADGLIHLSEISWGRINHPSEVLKP 305 Query: 498 GDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMA 548 GDEV+ +DR+++ I+LS++ A+ + + +A Sbjct: 306 GDEVDVMVLNIDREHKKIALSMKRTQPEPWATAMERYDVGQIVEGEVTQIA 356 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 59/264 (22%), Positives = 110/264 (41%), Gaps = 26/264 (9%) Query: 15 EIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK--------NAQGELEIQVGD 66 + + G IV VV +K +LVD IP+ Q + Q EL VG Sbjct: 160 QQKLETGEIVDCKVVGYNKGGLLVDL-GGLRGFIPSSQISFLVSSNDADRQSELANLVGR 218 Query: 67 EVDVALDAVEDGFGETLLSREKAKRHE---AWITLEKAYEDAETVTGVINGKVKGGFTVE 123 + + V +LS A + + L + + + V G + G V+ Sbjct: 219 TLQAKVIEVNRKRNRLILSERIATQERKETSKERLIEELREGQIVKGRVTSLADFGAFVD 278 Query: 124 LNGIRAFLPGSLVDVRPVRDTLHLE--GKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 + G + S + + + G E++ V+ +D++ + +S + Sbjct: 279 IGGADGLIHLSEISWGRINHPSEVLKPGDEVDVMVLNIDREHKKIALSMK----RTQPEP 334 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 +E G V+G V + +G FV L G++GL+H++++ +V VGD+ Sbjct: 335 WATAMERYDVGQIVEGEVTQIAPFGVFVRLEDGIEGLVHMSELGDTKV-------QVGDK 387 Query: 241 ITVKVLKFDRERTRVSLGLKQLGE 264 + ++V+K D +R R+ L ++QL E Sbjct: 388 LRLRVIKMDTQRRRIGLSVRQLDE 411 Score = 96.6 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 11/166 (6%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE---IQVGDEVDVALD 73 E R G IV+G V ++ VD G ++ I + + ++ GDEVDV + Sbjct: 256 ELREGQIVKGRVTSLADFGAFVDIGG-ADGLIHLSEISWGRINHPSEVLKPGDEVDVMVL 314 Query: 74 AVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFLP 132 ++ + LS ++ + E W T + Y+ + V G + G V L GI + Sbjct: 315 NIDREHKKIALSMKR-TQPEPWATAMERYDVGQIVEGEVTQIAPFGVFVRLEDGIEGLVH 373 Query: 133 GSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 S + DT G +L +VIK+D +R + +S R + E + Sbjct: 374 MSELG-----DTKVQVGDKLRLRVIKMDTQRRRIGLSVRQLDEPDY 414 >UniRef50_A8Z6B9 Putative ribosomal protein S1 n=1 Tax=Candidatus Sulcia muelleri GWSS RepID=A8Z6B9_SULMW Length = 614 Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats. Identities = 135/360 (37%), Positives = 219/360 (60%), Gaps = 8/360 (2%) Query: 23 IVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGFGET 82 I G ++ I V++D G K+E I +F+ +V D ++V ++ + D G Sbjct: 72 IYNGKIIKIIDRNVVIDFGFKAEGVISLNEFRYE----LPKVNDIIEVIVEKL-DYKGRC 126 Query: 83 LLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVR 142 ++S KAK+ ++W +++ + E + + + KGG V L GI FLPGS + ++PV+ Sbjct: 127 IISYNKAKKLKSWEIIQEKFIKNEIIIFFVAARTKGGLIVVLFGIECFLPGSQIYIKPVK 186 Query: 143 DTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNL 202 D GK +E K++K++ K+ NVVVS + +IE ++ +L+ L++G ++GIVKN+ Sbjct: 187 DFDFYVGKTMEGKIVKINNKKKNVVVSHKILIEKYIEKKKRKLISKLEKGQVLRGIVKNI 246 Query: 203 TDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQ 261 T YG+F+D+ GG+DGL HITD++W+R++HPSE + +G I +L D+ + RV LGLKQ Sbjct: 247 THYGSFIDIGGGIDGLCHITDISWERIEHPSEKLEIGQTINFVILSIDKIKNRVQLGLKQ 306 Query: 262 LGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDW--TNKNIHPS 319 L +PW ++ + +G + G VT +TDYG FVEI GVEGLVHVSEM W T K Sbjct: 307 LQSNPWNSLEEEIKKGKVVIGTVTVVTDYGAFVEIFPGVEGLVHVSEMSWSKTKKLRSSQ 366 Query: 320 KVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGI 379 V +GD ++V++L+ D +++SL LK+ +PW+ + + G +KS T+FG+ Sbjct: 367 SFVKIGDKIKVLILNYDISDQKMSLSLKRLTPDPWENIEKKYKIGSIHIVTVKSFTNFGV 426 Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats. Identities = 100/393 (25%), Positives = 182/393 (46%), Gaps = 21/393 (5%) Query: 84 LSREKAKRHEAWITLEK----AYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVR 139 LS+E+ + + L + + G I + ++ F ++ + Sbjct: 45 LSKEEQEERKKIEKLYSDTISSIHEFYIYNGKIIKIIDRNVVIDF----GFKAEGVISLN 100 Query: 140 PVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIV 199 R L +E V KLD K ++ +A +++ ++N + V Sbjct: 101 EFRYELPKVNDIIEVIVEKLDYKGRCIISYNKAKKLKSWEIIQEKFIKN----EIIIFFV 156 Query: 200 KNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGL 259 T G V L G++ L + + K VK VG + K++K + ++ V + Sbjct: 157 AARTKGGLIVVLFGIECFLPGSQIYIKPVKDFD--FYVGKTMEGKIVKINNKKKNVVVSH 214 Query: 260 K----QLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKN 315 K + E + + +G L G V N+T YG F++I G++GL H++++ W + Sbjct: 215 KILIEKYIEKKKRKLISKLEKGQVLRGIVKNITHYGSFIDIGGGIDGLCHITDISWE-RI 273 Query: 316 IHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSIT 375 HPS+ + +G + ++L ID+ + R+ LGLKQ ++NPW E KG V G + +T Sbjct: 274 EHPSEKLEIGQTINFVILSIDKIKNRVQLGLKQLQSNPWNSLEEEIKKGKVVIGTVTVVT 333 Query: 376 DFGIFIGLDGGIDGLVHLSDISWNVAGE--EAVREYKKGDEIAAVVLQVDAERERISLGV 433 D+G F+ + G++GLVH+S++SW+ + + K GD+I ++L D +++SL + Sbjct: 334 DYGAFVEIFPGVEGLVHVSEMSWSKTKKLRSSQSFVKIGDKIKVLILNYDISDQKMSLSL 393 Query: 434 KQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGA 466 K+L DP+ N K G+I V + G Sbjct: 394 KRLTPDPWENIEKKYKIGSIHIVTVKSFTNFGV 426 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 94/408 (23%), Positives = 173/408 (42%), Gaps = 25/408 (6%) Query: 153 EFKVIKLDQKRNNVVVSRRAVIESENSAER-DQLLENLQEGMEVKGIVKNLTDYGAFVDL 211 K+ D + +S+ E + + + ++ E G + + D +D Sbjct: 30 NVKLSYFDWSSYELGLSKEEQEERKKIEKLYSDTISSIHEFYIYNGKIIKIIDRNVVIDF 89 Query: 212 G-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAI 270 G +G++ + + + E+ V D I V V K D + + K W I Sbjct: 90 GFKAEGVISLNEFRY-------ELPKVNDIIEVIVEKLDYKGRCIISYNKAKKLKSWEII 142 Query: 271 AKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNV--GDVV 328 +++ + + V T G V + G+E + S++ I P K + G + Sbjct: 143 QEKFIKNEIIIFFVAARTKGGLIVVLF-GIECFLPGSQI-----YIKPVKDFDFYVGKTM 196 Query: 329 EVMVLDIDEERRRISLGLKQCKANPWQQFA----ETHNKGDRVEGKIKSITDFGIFIGLD 384 E ++ I+ +++ + + K ++ KG + G +K+IT +G FI + Sbjct: 197 EGKIVKINNKKKNVVVSHKILIEKYIEKKKRKLISKLEKGQVLRGIVKNITHYGSFIDIG 256 Query: 385 GGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNW 444 GGIDGL H++DISW E + + G I V+L +D + R+ LG+KQL +P+N+ Sbjct: 257 GGIDGLCHITDISWERI-EHPSEKLEIGQTINFVILSIDKIKNRVQLGLKQLQSNPWNSL 315 Query: 445 VALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDAT---LVLSVGDEV 501 KKG +V G VT V GA VE+ GVEG + SE S + + + +GD++ Sbjct: 316 EEEIKKGKVVIGTVTVVTDYGAFVEIFPGVEGLVHVSEMSWSKTKKLRSSQSFVKIGDKI 375 Query: 502 EAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAE 549 + D ++ +SLS++ ++ + + Sbjct: 376 KVLILNYDISDQKMSLSLKRLTPDPWENIEKKYKIGSIHIVTVKSFTN 423 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 55/330 (16%), Positives = 128/330 (38%), Gaps = 27/330 (8%) Query: 242 TVKVLKFDRERTRVSLGLKQLGEDPWVA-----IAKRYPEGTKLTGRVTNLTDYGCFVEI 296 VK+ FD + L ++ E + E G++ + D ++ Sbjct: 30 NVKLSYFDWSSYELGLSKEEQEERKKIEKLYSDTISSIHEFYIYNGKIIKIIDRNVVIDF 89 Query: 297 EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQ 356 EG++ ++E + ++ V D++EV+V +D + R I K K W+ Sbjct: 90 GFKAEGVISLNEFRY--------ELPKVNDIIEVIVEKLDYKGRCIISYNKAKKLKSWEI 141 Query: 357 FAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIA 416 E K + + + + T G+ + L GI+ + S I + ++ G + Sbjct: 142 IQEKFIKNEIIIFFVAARTKGGLIVVLF-GIECFLPGSQIYIKPVKD---FDFYVGKTME 197 Query: 417 AVVLQVDAERERISLGVKQLAEDPFNNW----VALNKKGAIVTGKVTAVDAKGATVELAD 472 +++++ +++ + + K L E ++ +KG ++ G V + G+ +++ Sbjct: 198 GKIVKINNKKKNVVVSHKILIEKYIEKKKRKLISKLEKGQVLRGIVKNITHYGSFIDIGG 257 Query: 473 GVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIA 532 G++G ++ S +R+E + L +G + +D+ + L ++ Sbjct: 258 GIDGLCHITDISWERIEHPSEKLEIGQTINFVILSIDKIKNRVQLGLKQLQSNPWNSLEE 317 Query: 533 TVNKQEDANFS------NNAMAEAFKAAKG 556 + K + + A E F +G Sbjct: 318 EIKKGKVVIGTVTVVTDYGAFVEIFPGVEG 347 Score = 47.6 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 4/80 (5%) Query: 395 DISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIV 454 DISW ++ YKKGD + +VL +D +I+LG KQL ++ + N G+I Sbjct: 539 DISWIKNLNNSINIYKKGDLVKLIVLGLDLITGKINLGSKQLIKNFWYE----NIIGSIH 594 Query: 455 TGKVTAVDAKGATVELADGV 474 TGK+ KGA ++ + Sbjct: 595 TGKIIKFFYKGAIIKFKKKI 614 >UniRef50_C4V2L6 Possible 30S ribosomal protein S1 n=2 Tax=Selenomonas RepID=C4V2L6_9FIRM Length = 370 Score = 288 bits (738), Expect = 3e-76, Method: Composition-based stats. Identities = 117/334 (35%), Positives = 192/334 (57%), Gaps = 5/334 (1%) Query: 32 DKDVVLVDAGLKSESAIPAEQFKNAQGELE---IQVGDEVDVALDAVEDGFGETLLSREK 88 +D VD G K E + + ++VGDE+DV + ++ G LS+ + Sbjct: 27 SRDEAYVDIGYKQEIPVSKRDLAVPAPDDARDVVKVGDEIDVYIKSLGGDNGG-SLSKVE 85 Query: 89 AKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLE 148 A + AW +E E ETV + +VKGG + G+R F+P S +++ V+D Sbjct: 86 ADKMAAWKDIEVIKEKGETVEAKVAKEVKGGLVAYVMGLRGFIPASQMELHFVKDLSVYV 145 Query: 149 GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAF 208 + +E ++I++D ++ +V+SRR ++E + + + + + ++ V+G VK L DYGAF Sbjct: 146 DQTVEAEIIEIDVQKRRLVLSRRKLLERDRAEKEEAVFSAIEPEQIVRGTVKRLVDYGAF 205 Query: 209 VDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWV 268 +D+GGVDGL HI+D+AW RVKHPSE++ VG E+ V V DR+ R+SL +K DPW+ Sbjct: 206 IDIGGVDGLAHISDLAWHRVKHPSEVLEVGQELDVYVKSVDRDTKRISLSVKDTLPDPWI 265 Query: 269 AIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVV 328 A++Y EG + G++ LTD+G F+EIE G +GL+ + E+ + + V+ GD+V Sbjct: 266 EKAEKYAEGDFIEGKIIKLTDFGAFMEIEPGFDGLIPMGELA-EKRIERADEAVHTGDIV 324 Query: 329 EVMVLDIDEERRRISLGLKQCKANPWQQFAETHN 362 V VL ID +R+RISL + + K + + + Sbjct: 325 IVKVLRIDTKRKRISLSITKAKRDADSADIKKYE 358 Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats. Identities = 87/338 (25%), Positives = 147/338 (43%), Gaps = 19/338 (5%) Query: 207 AFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGED 265 A+VD+G + + D+A ++V VGDEI V + + L ++ D Sbjct: 31 AYVDIGYKQEIPVSKRDLAVPAPDDARDVVKVGDEIDVYIKSLGGDNG---GSLSKVEAD 87 Query: 266 ---PWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMD-WTNKNIHPSKV 321 W I +G + +V G + G+ G + S+M+ K++ Sbjct: 88 KMAAWKDIEVIKEKGETVEAKVAKEVKGGLVAYVM-GLRGFIPASQMELHFVKDLS---- 142 Query: 322 VNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAET----HNKGDRVEGKIKSITDF 377 V V VE +++ID ++RR+ L ++ + E V G +K + D+ Sbjct: 143 VYVDQTVEAEIIEIDVQKRRLVLSRRKLLERDRAEKEEAVFSAIEPEQIVRGTVKRLVDY 202 Query: 378 GIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLA 437 G FI + GG+DGL H+SD++W+ + + G E+ V VD + +RISL VK Sbjct: 203 GAFIDI-GGVDGLAHISDLAWHRV-KHPSEVLEVGQELDVYVKSVDRDTKRISLSVKDTL 260 Query: 438 EDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSV 497 DP+ +G + GK+ + GA +E+ G +G + E + R+E A + Sbjct: 261 PDPWIEKAEKYAEGDFIEGKIIKLTDFGAFMEIEPGFDGLIPMGELAEKRIERADEAVHT 320 Query: 498 GDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVN 535 GD V K +D K + ISLS+ + I Sbjct: 321 GDIVIVKVLRIDTKRKRISLSITKAKRDADSADIKKYE 358 >UniRef50_D0LLG7 RNA binding S1 domain protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LLG7_HALO1 Length = 410 Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats. Identities = 124/367 (33%), Positives = 203/367 (55%), Gaps = 22/367 (5%) Query: 2 TESFAQLFEESLKEIE---------TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQ 52 E FA L + KE + G V G VV++ + V K+E+ + +Q Sbjct: 7 QEDFAALLDAFEKEHSADEKPGRKRPQVGDTVTGQVVSVGSEAAFVQVDGKTEAFLGLDQ 66 Query: 53 FKNAQGELEIQVGDEVDVALDAVEDGFGETLLS----REKAKRHEAWITLEKAYEDAETV 108 + GE+ +Q GD V+ + + R +A LE+A+ V Sbjct: 67 ITDENGEILVQEGDTVEARIVEMRGDMPVLRTVVAGGRSAGHGPDAVAELEQAHAHGLPV 126 Query: 109 TGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLD--QKRNNV 166 G I KGG V++ G+R F P S + V D GK+L F++ +L+ +K+ N+ Sbjct: 127 EGQITAVNKGGVEVQVGGVRGFCPISQLSDSFVEDAGEYVGKKLSFRITRLETSRKQANL 186 Query: 167 VVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWK 226 V+SRRA++E +A + L+EG+ ++G V ++ +GAFVD+GG++G++H++++ + Sbjct: 187 VLSRRALLEEAKAAIAAETRARLREGVTIRGTVTSMKPFGAFVDIGGLEGMIHVSELGFG 246 Query: 227 RVKHPSEIVNVGDEITVKVLKFD-------RERTRVSLGLKQLGEDPWVAIAKRYPEGTK 279 RV HP ++++VG E+ V+VL+ + + R R++L +K L +DPW AI +RY G + Sbjct: 247 RVDHPEDVLHVGQEVDVQVLRIEETRDKDAKRRERIALSMKALADDPWDAIEQRYGNGGQ 306 Query: 280 LTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEER 339 GRV L +G F+EIE G+EGL H+S++ + HP +V+ VGD VEV VL ++ ER Sbjct: 307 AKGRVVRLQPFGAFIEIEPGIEGLAHISQLGAGRRIQHPREVLKVGDEVEVNVLGVERER 366 Query: 340 RRISLGL 346 RRISL + Sbjct: 367 RRISLSI 373 Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats. Identities = 93/403 (23%), Positives = 174/403 (43%), Gaps = 31/403 (7%) Query: 173 VIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHP 231 E E+SA+ + Q G V G V ++ AFV + G + L + + ++ Sbjct: 16 AFEKEHSADEKPGRKRPQVGDTVTGQVVSVGSEAAFVQVDGKTEAFLGLDQITD---ENG 72 Query: 232 SEIVNVGDEITVKVLKFDRE----RTRVSLGLKQ-LGEDPWVAIAKRYPEGTKLTGRVTN 286 +V GD + ++++ + RT V+ G G D + + + G + G++T Sbjct: 73 EILVQEGDTVEARIVEMRGDMPVLRTVVAGGRSAGHGPDAVAELEQAHAHGLPVEGQITA 132 Query: 287 LTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRR--ISL 344 + G GV G +S++ + + V G + + ++ R++ + L Sbjct: 133 VNKGGVE-VQVGGVRGFCPISQLSDSF-VEDAGEYV--GKKLSFRITRLETSRKQANLVL 188 Query: 345 GLKQCKANPWQQFAE----THNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNV 400 + A +G + G + S+ FG F+ + GG++G++H+S++ + Sbjct: 189 SRRALLEEAKAAIAAETRARLREGVTIRGTVTSMKPFGAFVDI-GGLEGMIHVSELGFGR 247 Query: 401 AGEEAVREYKKGDEIAAVVLQVD-------AERERISLGVKQLAEDPFNNWVALNKKGAI 453 + G E+ VL+++ RERI+L +K LA+DP++ G Sbjct: 248 V-DHPEDVLHVGQEVDVQVLRIEETRDKDAKRRERIALSMKALADDPWDAIEQRYGNGGQ 306 Query: 454 VTGKVTAVDAKGATVELADGVEGYLRASEA-SRDRVEDATLVLSVGDEVEAKFTGVDRKN 512 G+V + GA +E+ G+EG S+ + R++ VL VGDEVE GV+R+ Sbjct: 307 AKGRVVRLQPFGAFIEIEPGIEGLAHISQLGAGRRIQHPREVLKVGDEVEVNVLGVERER 366 Query: 513 RAISLSVRAKDEADEKDA--IATVNKQEDANFSNNAMAEAFKA 553 R ISLS+ + E A +A + + + A+ K Sbjct: 367 RRISLSIGGATDEHEAGASEVAAHAARSTSGGNLGTFADLLKK 409 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 99/347 (28%), Positives = 171/347 (49%), Gaps = 26/347 (7%) Query: 105 AETVTGVINGKVKGGFTVELNG-IRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKR 163 +TVTG + V+++G AFL + L EG +E +++++ R Sbjct: 35 GDTVTGQVVSVGSEAAFVQVDGKTEAFLGLDQITDENGE-ILVQEGDTVEARIVEM---R 90 Query: 164 NNVVVSRRAVIESENSAERDQLLENLQE----GMEVKGIVKNLTDYGAFVDLGGVDGLLH 219 ++ V R V ++ + L++ G+ V+G + + G V +GGV G Sbjct: 91 GDMPVLRTVVAGGRSAGHGPDAVAELEQAHAHGLPVEGQITAVNKGGVEVQVGGVRGFCP 150 Query: 220 ITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTR--VSLGLKQLGEDPWVAIA----KR 273 I+ ++ V+ E VG +++ ++ + + R + + L + L E+ AIA R Sbjct: 151 ISQLSDSFVEDAGEY--VGKKLSFRITRLETSRKQANLVLSRRALLEEAKAAIAAETRAR 208 Query: 274 YPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVL 333 EG + G VT++ +G FV+I G+EG++HVSE+ + HP V++VG V+V VL Sbjct: 209 LREGVTIRGTVTSMKPFGAFVDIG-GLEGMIHVSEL-GFGRVDHPEDVLHVGQEVDVQVL 266 Query: 334 DIDE-------ERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGG 386 I+E R RI+L +K +PW + + G + +G++ + FG FI ++ G Sbjct: 267 RIEETRDKDAKRRERIALSMKALADDPWDAIEQRYGNGGQAKGRVVRLQPFGAFIEIEPG 326 Query: 387 IDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGV 433 I+GL H+S + + K GDE+ VL V+ ER RISL + Sbjct: 327 IEGLAHISQLGAGRRIQHPREVLKVGDEVEVNVLGVERERRRISLSI 373 >UniRef50_A3ZTD7 30S ribosomal protein S1 n=2 Tax=Bacteria RepID=A3ZTD7_9PLAN Length = 536 Score = 286 bits (731), Expect = 2e-75, Method: Composition-based stats. Identities = 107/342 (31%), Positives = 175/342 (51%), Gaps = 11/342 (3%) Query: 13 LKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVAL 72 + S + V + ++ V +D +++ + F ++G +++V + Sbjct: 158 ISGKTLEVDSRLNATVARVHREEVFIDLPGQNQGFVSLRSF-----VAPPEIGAKLEVVI 212 Query: 73 DAVEDGFG-ETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFL 131 + G L + W L + V V++G KGG + R F+ Sbjct: 213 IKYDREQGLYEALVPGSSVSVVDWGDL----TEGILVDAVVDGVNKGGLECAVGQARGFI 268 Query: 132 PGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQE 191 P S + V + G++L+ V + + +R N+V+S RAV E R + + LQ Sbjct: 269 PASQIAPHHVTNMEDYLGQKLQCLVTEANPERRNLVLSARAVAEKAKEDSRKETMVTLQV 328 Query: 192 GMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRE 251 G G V L D+GAFVD+GGVDGL+H++ ++W RVKHPS+ ++ G + VKV K D E Sbjct: 329 GQMRDGTVTRLQDFGAFVDIGGVDGLVHVSQISWDRVKHPSDALSEGQAVRVKVTKIDPE 388 Query: 252 RTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDW 311 ++ L ++ E+PW +A+ + G + G+VT + D+G FVEI G+EGLVHVSE+ Sbjct: 389 TGKIGLSIRDTLENPWQKVAEEFSVGAIINGKVTKIMDFGAFVEIAPGIEGLVHVSEVSH 448 Query: 312 TNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP 353 T + V+ G+ VEV V++ID+E+RRI L +K P Sbjct: 449 T-RVSRIESVLKAGEKVEVKVVNIDKEKRRIGLSIKALSPAP 489 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 90/363 (24%), Positives = 162/363 (44%), Gaps = 25/363 (6%) Query: 187 ENLQEGMEVKGIVKNLTDYGAFVDLGGVD-GLLHITDMAWKRVKHPSEIVNVGDEITVKV 245 + L+ + V + F+DL G + G + + V P +G ++ V + Sbjct: 161 KTLEVDSRLNATVARVHREEVFIDLPGQNQGFVSLR----SFVAPPE----IGAKLEVVI 212 Query: 246 LKFDRERTRVSLGLKQLGEDPWVAIAK--RYPEGTKLTGRVTNLTDYGCFVEIEEGVEGL 303 +K+DRE+ + L V++ EG + V + G + + G Sbjct: 213 IKYDREQGLY----EALVPGSSVSVVDWGDLTEGILVDAVVDGVNKGGLECAVGQ-ARGF 267 Query: 304 VHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLK----QCKANPWQQFAE 359 + S++ + + + G ++ +V + + ERR + L + + K + ++ Sbjct: 268 IPASQIA-PHHVTNMEDYL--GQKLQCLVTEANPERRNLVLSARAVAEKAKEDSRKETMV 324 Query: 360 THNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVV 419 T G +G + + DFG F+ + GG+DGLVH+S ISW+ + +G + V Sbjct: 325 TLQVGQMRDGTVTRLQDFGAFVDI-GGVDGLVHVSQISWDRV-KHPSDALSEGQAVRVKV 382 Query: 420 LQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLR 479 ++D E +I L ++ E+P+ GAI+ GKVT + GA VE+A G+EG + Sbjct: 383 TKIDPETGKIGLSIRDTLENPWQKVAEEFSVGAIINGKVTKIMDFGAFVEIAPGIEGLVH 442 Query: 480 ASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQED 539 SE S RV VL G++VE K +D++ R I LS++A A + +E Sbjct: 443 VSEVSHTRVSRIESVLKAGEKVEVKVVNIDKEKRRIGLSIKALSPAPASKSGGKKKDEEP 502 Query: 540 ANF 542 + Sbjct: 503 EDL 505 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 69/176 (39%), Gaps = 10/176 (5%) Query: 6 AQLFEESLKE--IETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK---NAQGEL 60 + E+S KE + + G + G V + VD G + + Q Sbjct: 312 EKAKEDSRKETMVTLQVGQMRDGTVTRLQDFGAFVDIGG-VDGLVHVSQISWDRVKHPSD 370 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 + G V V + ++ G+ LS + W + + + + G + + G Sbjct: 371 ALSEGQAVRVKVTKIDPETGKIGLSI-RDTLENPWQKVAEEFSVGAIINGKVTKIMDFGA 429 Query: 121 TVELN-GIRAFLPGSLVDVRPVRDTLHLE--GKELEFKVIKLDQKRNNVVVSRRAV 173 VE+ GI + S V V + G+++E KV+ +D+++ + +S +A+ Sbjct: 430 FVEIAPGIEGLVHVSEVSHTRVSRIESVLKAGEKVEVKVVNIDKEKRRIGLSIKAL 485 >UniRef50_D2R2F1 RNA binding S1 domain protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R2F1_9PLAN Length = 502 Score = 284 bits (728), Expect = 5e-75, Method: Composition-based stats. Identities = 112/357 (31%), Positives = 179/357 (50%), Gaps = 12/357 (3%) Query: 14 KEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALD 73 K S R VV I D V G K++ F +VG +DV ++ Sbjct: 123 KASTVETDSQHRAQVVEIHGDNVFFALGGKNQGVASLRSFATP-----PEVGSMLDVVVN 177 Query: 74 AVEDGFGETLLSREKAKRHEA-WITLEKAYEDAETVTGVINGKVKGGFTVEL-NGIRAFL 131 + +S K W + + V I GG E+ G+R F+ Sbjct: 178 SFNTEDNLYEVSVAGGKLVAGNWSDIR----EGGLVDAKIVAANTGGLECEIAGGVRGFI 233 Query: 132 PGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQE 191 P S + V + L G+ + + + +++R NVV+SRRAV+E E + + +L+ ++ Sbjct: 234 PASQAGLYRVENLGDLVGQRITCVITEANERRGNVVLSRRAVLEREKESAKKELMASIAI 293 Query: 192 GMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRE 251 G +G+V+ + D+GAFVD+GG+DGL+HI+ M+W R+KHPSEI+ G ++ V++ K D E Sbjct: 294 GDMREGVVRKIQDFGAFVDMGGIDGLIHISQMSWDRIKHPSEILTEGQKVRVRIEKIDPE 353 Query: 252 RTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDW 311 ++ L L+ E PW I +++P G+ + G V+ L +G FV++ GVEGL+H+SE+ Sbjct: 354 TGKIGLSLRNQQEHPWTGIDQKFPVGSIVKGTVSRLAAFGAFVKLSPGVEGLIHISELAH 413 Query: 312 TNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVE 368 N+ VV G VEV +L + E +RISL LK P + V+ Sbjct: 414 -NRVYAVQNVVKEGQEVEVKILTVSAEDQRISLSLKATLQAPAKSEKTKAEAAPEVD 469 Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 90/366 (24%), Positives = 159/366 (43%), Gaps = 22/366 (6%) Query: 187 ENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVL 246 ++ + + V + F LGG + + + + P E VG + V V Sbjct: 125 STVETDSQHRAQVVEIHGDNVFFALGGKNQGV----ASLRSFATPPE---VGSMLDVVVN 177 Query: 247 KFDRERTRVSLGLK--QLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLV 304 F+ E + + +L W I EG + ++ G EI GV G + Sbjct: 178 SFNTEDNLYEVSVAGGKLVAGNWSDIR----EGGLVDAKIVAANTGGLECEIAGGVRGFI 233 Query: 305 HVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC----KANPWQQFAET 360 S+ + + +V G + ++ + +E R + L + K + ++ + Sbjct: 234 PASQ-AGLYRVENLGDLV--GQRITCVITEANERRGNVVLSRRAVLEREKESAKKELMAS 290 Query: 361 HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL 420 GD EG ++ I DFG F+ + GGIDGL+H+S +SW+ + +G ++ + Sbjct: 291 IAIGDMREGVVRKIQDFGAFVDM-GGIDGLIHISQMSWDRI-KHPSEILTEGQKVRVRIE 348 Query: 421 QVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRA 480 ++D E +I L ++ E P+ G+IV G V+ + A GA V+L+ GVEG + Sbjct: 349 KIDPETGKIGLSLRNQQEHPWTGIDQKFPVGSIVKGTVSRLAAFGAFVKLSPGVEGLIHI 408 Query: 481 SEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDA 540 SE + +RV V+ G EVE K V +++ ISLS++A +A K + Sbjct: 409 SELAHNRVYAVQNVVKEGQEVEVKILTVSAEDQRISLSLKATLQAPAKSEKTKAEAAPEV 468 Query: 541 NFSNNA 546 + A Sbjct: 469 DEPPRA 474 Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 65/280 (23%), Positives = 110/280 (39%), Gaps = 15/280 (5%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQ-VGDEVDVALDAV 75 + R G +V +VA + + + IPA Q + E VG + + Sbjct: 202 DIREGGLVDAKIVAANTGGLECEIAGGVRGFIPASQAGLYRVENLGDLVGQRITCVITEA 261 Query: 76 EDGFGETLLSREKA---KRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLP 132 + G +LSR ++ A L + + GV+ G V++ GI + Sbjct: 262 NERRGNVVLSRRAVLEREKESAKKELMASIAIGDMREGVVRKIQDFGAFVDMGGIDGLIH 321 Query: 133 GSLVDVRPVRDTLHLE--GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQ 190 S + ++ + G+++ ++ K+D + + +S R E + + Sbjct: 322 ISQMSWDRIKHPSEILTEGQKVRVRIEKIDPETGKIGLSLRNQQEHPWTGIDQKF----P 377 Query: 191 EGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFD 249 G VKG V L +GAFV L GV+GL+HI+++A RV +V G E+ VK+L Sbjct: 378 VGSIVKGTVSRLAAFGAFVKLSPGVEGLIHISELAHNRVYAVQNVVKEGQEVEVKILTVS 437 Query: 250 RERTRVSLGLKQLGEDP----WVAIAKRYPEGTKLTGRVT 285 E R+SL LK + P V Sbjct: 438 AEDQRISLSLKATLQAPAKSEKTKAEAAPEVDEPPRAPVV 477 Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 6/112 (5%) Query: 15 EIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ---GELEIQVGDEVDVA 71 + + GSIV+G V + V E I + + + + ++ G EV+V Sbjct: 373 DQKFPVGSIVKGTVSRLAAFGAFVKLSPGVEGLIHISELAHNRVYAVQNVVKEGQEVEVK 432 Query: 72 LDAVEDGFGETLLSRE---KAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 + V LS + +A E A E E + K G Sbjct: 433 ILTVSAEDQRISLSLKATLQAPAKSEKTKAEAAPEVDEPPRAPVVPKRSGPL 484 >UniRef50_UPI00016C5864 30S ribosomal protein S1 n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C5864 Length = 546 Score = 284 bits (727), Expect = 6e-75, Method: Composition-based stats. Identities = 107/319 (33%), Positives = 179/319 (56%), Gaps = 13/319 (4%) Query: 34 DVVLVDA-GLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGFGETLLSRE-KAKR 91 + V V+ G +S+ +P +QF+ + VG+ VD +D + G +L+RE A+ Sbjct: 187 NDVFVEVPGGRSQGLLPLQQFEGRRP----AVGESVDFDIDHYDSANGLLILTREGAAQV 242 Query: 92 HEAWITLEKAYEDAETVTGVING--KVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEG 149 W + V + G K K G T+E+ GI+ FLP S +D+ V + G Sbjct: 243 VHDWTQVTY----GMVVEAKVTGTNKNKTGLTIEVAGIKGFLPASQLDLYRVENVDQFVG 298 Query: 150 KELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFV 209 + L+ V +++ + N++VSRRAV+E E + ++ +++ KGIV+++ +GAFV Sbjct: 299 QRLKVMVSEVNPEERNLIVSRRAVLEREKQVKAEEFWRTVEKDQVRKGIVRSVKPFGAFV 358 Query: 210 DLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVA 269 DLGG DGL+ +++ +W+RV +E+V +G E+ VK+ K D E ++ L ++ L P+ Sbjct: 359 DLGGADGLIPVSEFSWQRVNDLNEVVKIGQEVEVKISKIDFEARKIGLSMRALTTSPFEE 418 Query: 270 IAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVE 329 K G ++TG+V+ L D+G FVE+ G+EGL+HVSE+ T + S V+ G V Sbjct: 419 FTKTTQAGARVTGKVSRLADFGAFVELAPGLEGLIHVSELS-TQRVRRVSDVIEPGQNVI 477 Query: 330 VMVLDIDEERRRISLGLKQ 348 V +L D +RI+L LK+ Sbjct: 478 VEILSTDPVTKRIALSLKK 496 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 85/322 (26%), Positives = 146/322 (45%), Gaps = 23/322 (7%) Query: 207 AFVDLGGVD--GLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGE 264 FV++ G GLL + +R VG+ + + +D + L + + Sbjct: 189 VFVEVPGGRSQGLLPLQQFEGRRPA-------VGESVDFDIDHYDSANGLLILTREGAAQ 241 Query: 265 DPWVAIAKRYPEGTKLTGRVT--NLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVV 322 V + G + +VT N G +E+ G++G + S++D + + + V Sbjct: 242 --VVHDWTQVTYGMVVEAKVTGTNKNKTGLTIEVA-GIKGFLPASQLDLY-RVENVDQFV 297 Query: 323 NVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETH----NKGDRVEGKIKSITDFG 378 G ++VMV +++ E R + + + Q AE K +G ++S+ FG Sbjct: 298 --GQRLKVMVSEVNPEERNLIVSRRAVLEREKQVKAEEFWRTVEKDQVRKGIVRSVKPFG 355 Query: 379 IFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAE 438 F+ L GG DGL+ +S+ SW + K G E+ + ++D E +I L ++ L Sbjct: 356 AFVDL-GGADGLIPVSEFSWQRVND-LNEVVKIGQEVEVKISKIDFEARKIGLSMRALTT 413 Query: 439 DPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVG 498 PF + + GA VTGKV+ + GA VELA G+EG + SE S RV + V+ G Sbjct: 414 SPFEEFTKTTQAGARVTGKVSRLADFGAFVELAPGLEGLIHVSELSTQRVRRVSDVIEPG 473 Query: 499 DEVEAKFTGVDRKNRAISLSVR 520 V + D + I+LS++ Sbjct: 474 QNVIVEILSTDPVTKRIALSLK 495 Score = 73.8 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 66/162 (40%), Gaps = 8/162 (4%) Query: 18 TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE---IQVGDEVDVALDA 74 + +G+V ++ VD G ++ IP +F + +++G EV+V + Sbjct: 338 VEKDQVRKGIVRSVKPFGAFVDLGG-ADGLIPVSEFSWQRVNDLNEVVKIGQEVEVKISK 396 Query: 75 VEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFLPG 133 ++ + LS +A + K + VTG ++ G VEL G+ + Sbjct: 397 IDFEARKIGLSM-RALTTSPFEEFTKTTQAGARVTGKVSRLADFGAFVELAPGLEGLIHV 455 Query: 134 SLVDVRPVRDTLHLE--GKELEFKVIKLDQKRNNVVVSRRAV 173 S + + VR + G+ + +++ D + +S + + Sbjct: 456 SELSTQRVRRVSDVIEPGQNVIVEILSTDPVTKRIALSLKKI 497 Score = 64.6 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 35/159 (22%), Positives = 66/159 (41%), Gaps = 16/159 (10%) Query: 379 IFIGLDGGI-DGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLA 437 +F+ + GG GL+ L G+ + + D+ + L + A Sbjct: 189 VFVEVPGGRSQGLLPLQQFEGRRPA--------VGESVDFDIDHYDSANGLLILTREGAA 240 Query: 438 EDPFNNWVALNKKGAIVTGKV--TAVDAKGATVELADGVEGYLRASEASRDRVEDATLVL 495 + + G +V KV T + G T+E+A G++G+L AS+ RVE+ Sbjct: 241 Q--VVHDWTQVTYGMVVEAKVTGTNKNKTGLTIEVA-GIKGFLPASQLDLYRVENVDQF- 296 Query: 496 SVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATV 534 VG ++ + V+ + R + +S RA E +++ Sbjct: 297 -VGQRLKVMVSEVNPEERNLIVSRRAVLEREKQVKAEEF 334 >UniRef50_D2RKJ8 Hydroxymethylbutenyl pyrophosphate reductase n=3 Tax=Veillonellaceae RepID=D2RKJ8_ACIFE Length = 680 Score = 278 bits (712), Expect = 3e-73, Method: Composition-based stats. Identities = 117/383 (30%), Positives = 205/383 (53%), Gaps = 25/383 (6%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE 61 E+ L E + ++ G IV VV + D V+VD G +SE ++ +Q+ + Sbjct: 276 METMESLLGEQ-ECMKLHIGMIVEATVVEVTDDEVVVDFGYQSEGSVAFDQWTLGGTKDT 334 Query: 62 I----QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVK 117 + + GD+V + + A E+ G +LSR KA+ +AW+ L + D +TV VK Sbjct: 335 VAPTVKPGDKVTLKVIASENQDGLVVLSRTKAEADQAWLKLPEELADKKTVQVKGLRAVK 394 Query: 118 GGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESE 177 GG TV G+ F+P S +D++ V D EGK+LE +++++ ++ +V SRR V+ E Sbjct: 395 GGLTVSYEGLTGFIPASHLDLKHVDDVKEYEGKDLEVSLLEINPEKKRLVFSRRNVLREE 454 Query: 178 NSAE------------------RDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLL 218 +A+ ++ + EG V+G +K++ D+G FV++ V GL+ Sbjct: 455 RAAKNAAWKEERAKREEERHEALEKAFQTFHEGETVEGTIKSIVDFGMFVEIAPMVQGLV 514 Query: 219 HITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGT 278 HI++++W R P+++ VG++I V + D E+ R+SL +K L EDPWVA AK + G Sbjct: 515 HISEVSWDRSVKPADLYKVGEKINVYIKGLDEEKGRISLSVKALQEDPWVAAAKEFRVGD 574 Query: 279 KLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEE 338 +TG V +G V++ + EG++H+SE+ + P V+ +G V+V VL +D E Sbjct: 575 VVTGTVVRFLPFGAIVKLNDKNEGMIHISEIA-EQRIDKPEDVLEIGQEVKVKVLRVDTE 633 Query: 339 RRRISLGLKQCKANPWQQFAETH 361 ++I+L + + K + + + Sbjct: 634 HKKIALSITKAKEDAEKAEMRQY 656 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 91/329 (27%), Positives = 156/329 (47%), Gaps = 28/329 (8%) Query: 235 VNVGDEITVKVLKFDRERTRVSLGLKQLGEDP-WVAIAKRYPEGTKLTGRVTNLTDYGCF 293 V GD++T+KV+ + + V L + D W+ + + + + + G Sbjct: 339 VKPGDKVTLKVIASENQDGLVVLSRTKAEADQAWLKLPEELADKKTVQVKGLRAVKGGLT 398 Query: 294 VEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP 353 V EG+ G + S +D K++ K G +EV +L+I+ E++R+ + Sbjct: 399 VS-YEGLTGFIPASHLDL--KHVDDVKEYE-GKDLEVSLLEINPEKKRLVFSRRNVLREE 454 Query: 354 W----------------------QQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLV 391 ++ +T ++G+ VEG IKSI DFG+F+ + + GLV Sbjct: 455 RAAKNAAWKEERAKREEERHEALEKAFQTFHEGETVEGTIKSIVDFGMFVEIAPMVQGLV 514 Query: 392 HLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKG 451 H+S++SW+ + + YK G++I + +D E+ RISL VK L EDP+ + G Sbjct: 515 HISEVSWDRSVK-PADLYKVGEKINVYIKGLDEEKGRISLSVKALQEDPWVAAAKEFRVG 573 Query: 452 AIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRK 511 +VTG V GA V+L D EG + SE + R++ VL +G EV+ K VD + Sbjct: 574 DVVTGTVVRFLPFGAIVKLNDKNEGMIHISEIAEQRIDKPEDVLEIGQEVKVKVLRVDTE 633 Query: 512 NRAISLSVRAKDEADEKDAIATVNKQEDA 540 ++ I+LS+ E EK + ++ Sbjct: 634 HKKIALSITKAKEDAEKAEMRQYLGKKST 662 Score = 81.9 bits (201), Expect = 6e-14, Method: Composition-based stats. Identities = 35/187 (18%), Positives = 78/187 (41%), Gaps = 9/187 (4%) Query: 8 LFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK---NAQGELEIQV 64 E++ + G V G + +I + V+ + + + + + +V Sbjct: 476 ALEKAFQTF--HEGETVEGTIKSIVDFGMFVEIAPMVQGLVHISEVSWDRSVKPADLYKV 533 Query: 65 GDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL 124 G++++V + +++ G LS KA + + W+ K + + VTG + + G V+L Sbjct: 534 GEKINVYIKGLDEEKGRISLSV-KALQEDPWVAAAKEFRVGDVVTGTVVRFLPFGAIVKL 592 Query: 125 N-GIRAFLPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 N + S + + + + G+E++ KV+++D + + +S E AE Sbjct: 593 NDKNEGMIHISEIAEQRIDKPEDVLEIGQEVKVKVLRVDTEHKKIALSITKAKEDAEKAE 652 Query: 182 RDQLLEN 188 Q L Sbjct: 653 MRQYLGK 659 Score = 43.0 bits (100), Expect = 0.030, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 30/78 (38%), Gaps = 3/78 (3%) Query: 35 VVLVDAGLKSESAIPAEQFKN---AQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKR 91 +V K+E I + + E +++G EV V + V+ + LS KAK Sbjct: 587 GAIVKLNDKNEGMIHISEIAEQRIDKPEDVLEIGQEVKVKVLRVDTEHKKIALSITKAKE 646 Query: 92 HEAWITLEKAYEDAETVT 109 + + T++ Sbjct: 647 DAEKAEMRQYLGKKSTLS 664 >UniRef50_A6LQP2 RNA binding S1 domain protein n=7 Tax=Clostridium RepID=A6LQP2_CLOB8 Length = 384 Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats. Identities = 109/353 (30%), Positives = 188/353 (53%), Gaps = 7/353 (1%) Query: 2 TESFAQLFEESLKEIETRP---GSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK--NA 56 E E L + + + G +++G V+ ++ V V+ + I E+ + Sbjct: 3 NEELESNMSELLNQYDVKRLNRGDVLKGKVIDVNDKEVSVNIDYAFDGLIAKEEVSIDDR 62 Query: 57 QGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKV 116 + DE+ V + + DG G LS KA + L + +++ + + + + Sbjct: 63 DPMEVVSKDDEIYVYVISPNDGEGYVELSLIKALEIKDREELSECFKEKKNIKVHVKEET 122 Query: 117 KGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIES 176 KGG +R F+PGSL + L G++L+ ++ +LD K V+ SRR + E Sbjct: 123 KGGVIAYYGNVRVFIPGSLASRERIE-LSSLVGRDLDVRITELDFKNKKVIASRRIIEEE 181 Query: 177 ENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVN 236 E + + + +NL+EG + G+VK + +GAFVD+GGV+GL+H++D++W+RV P +IV Sbjct: 182 EYNKNKKNIWDNLKEGEKRNGVVKKIVKFGAFVDIGGVEGLIHLSDLSWERVNKPEDIVK 241 Query: 237 VGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI 296 GD + V + DR+ R+SL LK + ++PW K EG G+V LT +G FVE+ Sbjct: 242 EGDNVEVFIGNVDRKNERLSLILKDVTKEPWTVHGKDINEGDIFEGKVIRLTTFGAFVEL 301 Query: 297 EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC 349 +G+EGLVH++E+ + PS V+ V+V VL ++ E +RI+L +K+ Sbjct: 302 FDGIEGLVHITEITDEH-IAKPSDVLEANQKVKVKVLSVNREEKRIALSIKEA 353 Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats. Identities = 92/373 (24%), Positives = 178/373 (47%), Gaps = 15/373 (4%) Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 ++ L G +KG V ++ D V++ DGL+ +++ + P E+V+ DEI V Sbjct: 19 VKRLNRGDVLKGKVIDVNDKEVSVNIDYAFDGLIAKEEVSIDD-RDPMEVVSKDDEIYVY 77 Query: 245 VLKFDRERTRVSLGL-KQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGL 303 V+ + V L L K L +++ + E + V T G V Sbjct: 78 VISPNDGEGYVELSLIKALEIKDREELSECFKEKKNIKVHVKEETKGGVIAY-YGNVRVF 136 Query: 304 VHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQF----AE 359 + S + I S +V G ++V + ++D + +++ + + + + + Sbjct: 137 IPGSLAS--RERIELSSLV--GRDLDVRITELDFKNKKVIASRRIIEEEEYNKNKKNIWD 192 Query: 360 THNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVV 419 +G++ G +K I FG F+ + GG++GL+HLSD+SW + K+GD + + Sbjct: 193 NLKEGEKRNGVVKKIVKFGAFVDI-GGVEGLIHLSDLSWERVNK-PEDIVKEGDNVEVFI 250 Query: 420 LQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLR 479 VD + ER+SL +K + ++P+ +G I GKV + GA VEL DG+EG + Sbjct: 251 GNVDRKNERLSLILKDVTKEPWTVHGKDINEGDIFEGKVIRLTTFGAFVELFDGIEGLVH 310 Query: 480 ASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQED 539 +E + + + + VL +V+ K V+R+ + I+LS++ E + K+ + ++ ++ Sbjct: 311 ITEITDEHIAKPSDVLEANQKVKVKVLSVNREEKRIALSIKEAVETN-KEYLDYIDNSDE 369 Query: 540 ANFSNNAMAEAFK 552 + S + + FK Sbjct: 370 SGTSLGDLLKGFK 382 Score = 61.5 bits (148), Expect = 9e-08, Method: Composition-based stats. Identities = 40/174 (22%), Positives = 77/174 (44%), Gaps = 7/174 (4%) Query: 354 WQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGD 413 Q + N+GD ++GK+ + D + + +D DGL+ ++S + + + K D Sbjct: 15 NQYDVKRLNRGDVLKGKVIDVNDKEVSVNIDYAFDGLIAKEEVSIDDR--DPMEVVSKDD 72 Query: 414 EIAAVVLQVDAERERISLG-VKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELAD 472 EI V+ + + L +K L K+ + V G + Sbjct: 73 EIYVYVISPNDGEGYVELSLIKALEIKDREELSECFKEKKNIKVHVKEETKGGV-IAYYG 131 Query: 473 GVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEAD 526 V ++ S ASR+R+E ++L VG +++ + T +D KN+ + S R +E + Sbjct: 132 NVRVFIPGSLASRERIELSSL---VGRDLDVRITELDFKNKKVIASRRIIEEEE 182 >UniRef50_B4U6I5 RNA binding S1 domain protein n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U6I5_HYDS0 Length = 525 Score = 276 bits (705), Expect = 2e-72, Method: Composition-based stats. Identities = 127/562 (22%), Positives = 244/562 (43%), Gaps = 47/562 (8%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL 60 M F +L + ++ + GS+V+G VV I V +D G K E I + + Sbjct: 1 MVTEFEELLKA--QKEQFSTGSVVKGSVVKITDSNVYLDIGYKIEGVIRRYEVGD----- 53 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 +++G E++ + + +LS + K + + +KA E + ++ K K GF Sbjct: 54 -VEIGQEIEAVIIKLRGIE-NPILSTKPLKSSKGFSIAKKALEQKTPIDVIVESKGKPGF 111 Query: 121 TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIK--LDQKRNNVVVSRRAVIESEN 178 V+L IRA +P G +++ V K + + V VS + E Sbjct: 112 FVQLEDIRALMPFGEAPRHVN------IGDKIKVLVTKATYENGKPMVNVSYKEYENIER 165 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTD-YGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVN 236 ++ + + +L+ G ++G V + G V L GV G + ++ + Sbjct: 166 HQKQLEFINSLEVGSTIEGKVIKVDPEKGITVLLKEGVRGFVPHYEIPKGT------NIK 219 Query: 237 VGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTD-YGCFVE 295 D + V+V+K ++ + L L++ ++ W + EG K G+V+ G FVE Sbjct: 220 ENDTLEVRVIKKAKKGDFLILSLRKPKKNIWETL--ELKEGDKTEGKVSFYRKGKGLFVE 277 Query: 296 IEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQ 355 ++EG+ LV M +K++ G ++++V ID+++++I + + + NP Sbjct: 278 LQEGITALVPEESMKNIG-----NKLLKSGTKLKLVVTRIDKDKKQIDVNIVPSEENPAA 332 Query: 356 QFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEI 415 F +++ V+GK+K++ FI L ++G+V D+SW + + G+E Sbjct: 333 DFIKSNPPNTIVKGKVKTVHPNIAFIELGPNVEGIVKKQDMSW-LKNARSEELLTPGEEK 391 Query: 416 AAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVE 475 +VL +D +++ LG+KQL ++P++ K G V V V G + L +G++ Sbjct: 392 EFMVLGLDG--KKVKLGLKQLTQNPWSVIPERYKPGQQVELAVKEVRPFGTFLGLPEGID 449 Query: 476 GYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSV-----RAKDEADEKDA 530 G L SE ++ L G + K V+ K I+ S+ + + E ++ Sbjct: 450 GLLPISEIPKNTN------LEPGQNITVKVLEVNPKEEKITFSMIQETKKQQKEQGDQKE 503 Query: 531 IATVNKQEDANFSNNAMAEAFK 552 VN + + K Sbjct: 504 FIKVNDSSSGFKLGDILKNKLK 525 >UniRef50_UPI00016B22D3 RNA binding S1 domain protein n=2 Tax=candidate division TM7 RepID=UPI00016B22D3 Length = 358 Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats. Identities = 107/341 (31%), Positives = 186/341 (54%), Gaps = 22/341 (6%) Query: 21 GSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGFG 80 G +V G V+++ K VL+D G + +P + ++ I GDEV ++ E G Sbjct: 25 GEVVTGKVLSLKKHEVLIDLGAQGVGFVPRREVGFSRN---ISEGDEVSASVVDTELENG 81 Query: 81 ETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRP 140 +LLS KA + W + E E + +GG VE G+R FLP S + Sbjct: 82 MSLLSLRKAVKDRGWEEVSARLESGEVIDIQPYDANRGGLLVEYEGVRGFLPVSQLSAEH 141 Query: 141 ------------VRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLEN 188 ++ +L GK ++ +++ D+K N ++ S + ++ + E Sbjct: 142 YPRVGSSDKDEILQRLNNLIGKTMKVRILDADRKSNKLIFSEKEAVKD----GLAERFEK 197 Query: 189 LQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKF 248 L G +V+G+V + D+G FV++ G++GL+HI++++W+RV +PS+ V G I K++ Sbjct: 198 LAVGDQVEGVVTGVVDFGVFVNVEGIEGLVHISEISWERVNNPSDYVKTGQTIKAKIIAI 257 Query: 249 DRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSE 308 D++ R+SL +KQL +DPW+ + + +G K+ G VT +T +G FV++ +E LVH+SE Sbjct: 258 DKD--RLSLSMKQLTQDPWLTEVQNFSKGDKVEGTVTRITPFGAFVQVSPAIEALVHISE 315 Query: 309 MDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC 349 + +N N+ P KV + + E ++LDID+E R+ISL L + Sbjct: 316 LGDSN-NVDPEKVFTLNERKEFVILDIDKENRKISLSLGES 355 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 96/359 (26%), Positives = 168/359 (46%), Gaps = 22/359 (6%) Query: 172 AVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKH 230 + E A D + L G V G V +L + +DLG G + ++ + R Sbjct: 5 KITMDELLAGADTSAKQLVAGEVVTGKVLSLKKHEVLIDLGAQGVGFVPRREVGFSR--- 61 Query: 231 PSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGED-PWVAIAKRYPEGTKLTGRVTNLTD 289 ++ GDE++ V+ + E L L++ +D W ++ R G + + + Sbjct: 62 ---NISEGDEVSASVVDTELENGMSLLSLRKAVKDRGWEEVSARLESGEVIDIQPYDANR 118 Query: 290 YGCFVEIEEGVEGLVHVSEMDWTNK----NIHPSKVVNV-----GDVVEVMVLDIDEERR 340 G VE EGV G + VS++ + + +++ G ++V +LD D + Sbjct: 119 GGLLVE-YEGVRGFLPVSQLSAEHYPRVGSSDKDEILQRLNNLIGKTMKVRILDADRKSN 177 Query: 341 RISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNV 400 ++ K+ + + E GD+VEG + + DFG+F+ ++ GI+GLVH+S+ISW Sbjct: 178 KLIFSEKEAVKDGLAERFEKLAVGDQVEGVVTGVVDFGVFVNVE-GIEGLVHISEISWER 236 Query: 401 AGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTA 460 K G I A ++ +D ++R+SL +KQL +DP+ V KG V G VT Sbjct: 237 VN-NPSDYVKTGQTIKAKIIAID--KDRLSLSMKQLTQDPWLTEVQNFSKGDKVEGTVTR 293 Query: 461 VDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSV 519 + GA V+++ +E + SE D V ++ + E +D++NR ISLS+ Sbjct: 294 ITPFGAFVQVSPAIEALVHISELGDSNNVDPEKVFTLNERKEFVILDIDKENRKISLSL 352 Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats. Identities = 57/284 (20%), Positives = 115/284 (40%), Gaps = 21/284 (7%) Query: 268 VAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDV 327 AK+ G +TG+V +L + +++ G V E+ ++ ++ GD Sbjct: 16 DTSAKQLVAGEVVTGKVLSLKKHEVLIDLGAQGVGFVPRREVGFSRN-------ISEGDE 68 Query: 328 VEVMVLDIDEERRRISLGL-KQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGG 386 V V+D + E L L K K W++ + G+ ++ + G+ + + G Sbjct: 69 VSASVVDTELENGMSLLSLRKAVKDRGWEEVSARLESGEVIDIQPYDANRGGLLVEYE-G 127 Query: 387 IDGLVHLSDISWNVAG-------EEAVREYK--KGDEIAAVVLQVDAERERISLGVKQLA 437 + G + +S +S +E ++ G + +L D + ++ K+ Sbjct: 128 VRGFLPVSQLSAEHYPRVGSSDKDEILQRLNNLIGKTMKVRILDADRKSNKLIFSEKEAV 187 Query: 438 EDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSV 497 +D G V G VT V G V + +G+EG + SE S +RV + + + Sbjct: 188 KDGLAERFEKLAVGDQVEGVVTGVVDFGVFVNV-EGIEGLVHISEISWERVNNPSDYVKT 246 Query: 498 GDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDAN 541 G ++AK +D+ +SLS++ + + +K + Sbjct: 247 GQTIKAKIIAIDKD--RLSLSMKQLTQDPWLTEVQNFSKGDKVE 288 >UniRef50_C6P7Z4 RNA binding S1 domain protein n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6P7Z4_CLOTS Length = 362 Score = 271 bits (693), Expect = 5e-71, Method: Composition-based stats. Identities = 110/377 (29%), Positives = 214/377 (56%), Gaps = 18/377 (4%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK---NAQG 58 + F + +L G IV+G ++ I D ++ D K+++ +P +Q N Sbjct: 1 MDDFMDEYSFNL----IHAGDIVKGKIIKILSDGIIADISYKADAYVPKDQLSLDPNLDI 56 Query: 59 ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 VGDE+D+ + ED G+ L S+ KA A L+ AY++ ++G I +KG Sbjct: 57 NKFFNVGDEIDLYIVKREDENGDVLASKIKADTELAKEKLDTAYKNGNILSGKIIEIIKG 116 Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 G ++ G++AF+P S +D+ V + G+ ++ K+I + ++ S++ V+E E Sbjct: 117 GVLADILGVKAFIPASQLDIHYVNNLNDYLGENVKVKIIDYIPNK-KLIASQKVVLEEEK 175 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVG 238 ++++LL+ LQEG ++G+VK++T +GAF+D+GG+DGL+ +++++W R K+ ++I+++G Sbjct: 176 LKKKEELLKTLQEGQVIQGVVKSITKFGAFIDIGGIDGLIPLSEISWVRNKNINDILHIG 235 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE 298 +++ V + D+E +V+L L++L DPW I+ ++ G + G++ N+T +G FV+I + Sbjct: 236 EKVDAYVERIDKE--KVTLSLRKLIPDPWTTISAKFKVGDVILGKIVNITTFGIFVDISD 293 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFA 358 GVEGLVH S++ + K +G+ + V +L+ID ++ + L++ N Sbjct: 294 GVEGLVHKSDL------LKNIKEYRIGENISVEILNIDTNNKK--MSLREIDKNNESYEL 345 Query: 359 ETHNKGDRVEGKIKSIT 375 E + +++SI Sbjct: 346 EREELNVSIIDRLQSIK 362 Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats. Identities = 89/354 (25%), Positives = 168/354 (47%), Gaps = 22/354 (6%) Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 + G VKG + + G D+ D + ++ ++ NVGDEI + Sbjct: 10 FNLIHAGDIVKGKIIKILSDGIIADISYKADAYVPKDQLSLDPNLDINKFFNVGDEIDLY 69 Query: 245 VLKFDRERTRVSLG-LKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGL 303 ++K + E V +K E + Y G L+G++ + G +I GV+ Sbjct: 70 IVKREDENGDVLASKIKADTELAKEKLDTAYKNGNILSGKIIEIIKGGVLADIL-GVKAF 128 Query: 304 VHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLK----QCKANPWQQFAE 359 + S++D N + + + G+ V+V ++D +++ K + K ++ + Sbjct: 129 IPASQLDIHYVN-NLNDYL--GENVKVKIIDYIP-NKKLIASQKVVLEEEKLKKKEELLK 184 Query: 360 THNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVV 419 T +G ++G +KSIT FG FI + GGIDGL+ LS+ISW V + G+++ A V Sbjct: 185 TLQEGQVIQGVVKSITKFGAFIDI-GGIDGLIPLSEISW-VRNKNINDILHIGEKVDAYV 242 Query: 420 LQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLR 479 ++D E +++L +++L DP+ A K G ++ GK+ + G V+++DGVEG + Sbjct: 243 ERIDKE--KVTLSLRKLIPDPWTTISAKFKVGDVILGKIVNITTFGIFVDISDGVEGLVH 300 Query: 480 ASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIAT 533 S+ ++ E +G+ + + +D N+ +SL R D+ +E + Sbjct: 301 KSDLLKNIKE-----YRIGENISVEILNIDTNNKKMSL--REIDKNNESYELER 347 Score = 68.4 bits (166), Expect = 7e-10, Method: Composition-based stats. Identities = 35/163 (21%), Positives = 64/163 (39%), Gaps = 5/163 (3%) Query: 354 WQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGD 413 + + GD V+GKI I GI + D V +S + + + + GD Sbjct: 6 DEYSFNLIHAGDIVKGKIIKILSDGIIADISYKADAYVPKDQLSLD-PNLDINKFFNVGD 64 Query: 414 EIAAVVLQVDAERERISLG-VKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELAD 472 EI +++ + E + +K E K G I++GK+ + G ++ Sbjct: 65 EIDLYIVKREDENGDVLASKIKADTELAKEKLDTAYKNGNILSGKIIEIIKGGVLADIL- 123 Query: 473 GVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAI 515 GV+ ++ AS+ V + L G+ V+ K + I Sbjct: 124 GVKAFIPASQLDIHYVNNLNDYL--GENVKVKIIDYIPNKKLI 164 Score = 50.0 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 44/107 (41%), Gaps = 2/107 (1%) Query: 447 LNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFT 506 L G IV GK+ + + G +++ + Y+ + S D D +VGDE++ Sbjct: 12 LIHAGDIVKGKIIKILSDGIIADISYKADAYVPKDQLSLDPNLDINKFFNVGDEIDLYIV 71 Query: 507 GVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKA 553 + +N + S D K+ + T K + N + + E K Sbjct: 72 KREDENGDVLASKIKADTELAKEKLDTAYK--NGNILSGKIIEIIKG 116 >UniRef50_B0K198 RNA binding S1 domain protein n=7 Tax=Thermoanaerobacter RepID=B0K198_THEPX Length = 365 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 109/371 (29%), Positives = 204/371 (54%), Gaps = 12/371 (3%) Query: 6 AQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK---NAQGELEI 62 F E RPG IV+G V+ + + ++ + KS++ +P + N + Sbjct: 1 MSDFLEGYTFKTLRPGDIVKGKVIKVSDEGIIANIDYKSDAFVPKNELSLNPNFDVKKTF 60 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 V DE+++ + +VE+ G L S+ A + +EKAY++ E + G + VKGG Sbjct: 61 NVEDELNLYIISVENDEGNVLASKVMADDKLSREKIEKAYKNEEIIEGEVIEVVKGGVIA 120 Query: 123 ELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 G + F+P S +++ V GK L ++I+ + +V S++ V++ E + Sbjct: 121 YSLGAKVFIPASQLELHYVDKLNEYLGKTLRLRIIEYIPGK-KIVGSQKEVLKLEREKAK 179 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 LL NL+EG V+G VKN+ D GAFVD+GG DG + +++++W+R+K+P E++ +GD+++ Sbjct: 180 KALLSNLKEGDIVEGRVKNIIDKGAFVDIGGFDGFIPLSEISWERIKNPREVLGMGDKVS 239 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 + +LK D + +++L L+++ DPW + +Y EG L G +T +T +G FV++E G+EG Sbjct: 240 IYILKVDEKNEKITLSLRKVLPDPWKNVETKYHEGEVLKGTITKITPFGVFVQLEPGIEG 299 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHN 362 LVH + ++ + K + D++ V +L+I+++ ++I+L K+ H Sbjct: 300 LVHKNNLENSIKT------YKINDIIGVEILNINQQDKKINL--KEVPLEEEDIVEIEHQ 351 Query: 363 KGDRVEGKIKS 373 + G+I + Sbjct: 352 ELRITLGEIFN 362 Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats. Identities = 65/347 (18%), Positives = 152/347 (43%), Gaps = 16/347 (4%) Query: 185 LLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITV 243 + L+ G VKG V ++D G ++ D + +++ + NV DE+ + Sbjct: 9 TFKTLRPGDIVKGKVIKVSDEGIIANIDYKSDAFVPKNELSLNPNFDVKKTFNVEDELNL 68 Query: 244 KVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGL 303 ++ + + V + ++ + ++ G + G + Sbjct: 69 YIISVENDEGNVLASKVMADDKLSREKIEKAYKNEEIIEGEVIEVVKGGVIAYSLGAKVF 128 Query: 304 VHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC----KANPWQQFAE 359 + S+++ + ++ + G + + +++ ++I K+ + + Sbjct: 129 IPASQLEL-HYVDKLNEYL--GKTLRLRIIEYIPG-KKIVGSQKEVLKLEREKAKKALLS 184 Query: 360 THNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVV 419 +GD VEG++K+I D G F+ + GG DG + LS+ISW + GD+++ + Sbjct: 185 NLKEGDIVEGRVKNIIDKGAFVDI-GGFDGFIPLSEISWERI-KNPREVLGMGDKVSIYI 242 Query: 420 LQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLR 479 L+VD + E+I+L ++++ DP+ N +G ++ G +T + G V+L G+EG + Sbjct: 243 LKVDEKNEKITLSLRKVLPDPWKNVETKYHEGEVLKGTITKITPFGVFVQLEPGIEGLVH 302 Query: 480 ASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEAD 526 + E++ + D + + ++++++ I+L +E D Sbjct: 303 KNNL-----ENSIKTYKINDIIGVEILNINQQDKKINLKEVPLEEED 344 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 78/363 (21%), Positives = 171/363 (47%), Gaps = 23/363 (6%) Query: 105 AETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQ 161 + V G + G ++ AF+P + + + P D EL +I ++ Sbjct: 16 GDIVKGKVIKVSDEGIIANIDYKSDAFVPKNELSLNPNFDVKKTFNVEDELNLYIISVEN 75 Query: 162 KRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHIT 221 NV+ S+ + + + ++ +N + + G G + + Sbjct: 76 DEGNVLASKVMADDKLSREKIEKAYKNEEIIEGEV---IEVVKGGVIAYSLGAKVFIPAS 132 Query: 222 DMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLG----EDPWVAIAKRYPEG 277 + V +E + G + ++++++ + ++ K++ E A+ EG Sbjct: 133 QLELHYVDKLNEYL--GKTLRLRIIEYIPGK-KIVGSQKEVLKLEREKAKKALLSNLKEG 189 Query: 278 TKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDE 337 + GRV N+ D G FV+I G +G + +SE+ W + +P +V+ +GD V + +L +DE Sbjct: 190 DIVEGRVKNIIDKGAFVDIG-GFDGFIPLSEISWE-RIKNPREVLGMGDKVSIYILKVDE 247 Query: 338 ERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDIS 397 + +I+L L++ +PW+ +++G+ ++G I IT FG+F+ L+ GI+GLVH +++ Sbjct: 248 KNEKITLSLRKVLPDPWKNVETKYHEGEVLKGTITKITPFGVFVQLEPGIEGLVHKNNL- 306 Query: 398 WNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGK 457 E +++ YK D I +L ++ + ++I+L K++ + + +++ I G+ Sbjct: 307 -----ENSIKTYKINDIIGVEILNINQQDKKINL--KEVPLEEEDIVEIEHQELRITLGE 359 Query: 458 VTA 460 + Sbjct: 360 IFN 362 Score = 114 bits (286), Expect = 7e-24, Method: Composition-based stats. Identities = 56/267 (20%), Positives = 111/267 (41%), Gaps = 10/267 (3%) Query: 276 EGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDI 335 G + G+V ++D G I+ + V +E+ N N K NV D + + ++ + Sbjct: 15 PGDIVKGKVIKVSDEGIIANIDYKSDAFVPKNELSL-NPNFDVKKTFNVEDELNLYIISV 73 Query: 336 DEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSD 395 + + + ++ E K + + G I G + S Sbjct: 74 ENDEGNVLASKVMADDKLSREKIEKAYKNEEIIEGEVIEVVKGGVIAYSLGAKVFIPASQ 133 Query: 396 ISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNW----VALNKKG 451 + + + + EY G + +++ + +I K++ + ++ K+G Sbjct: 134 LELHYVDK--LNEY-LGKTLRLRIIEYIPGK-KIVGSQKEVLKLEREKAKKALLSNLKEG 189 Query: 452 AIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRK 511 IV G+V + KGA V++ G +G++ SE S +R+++ VL +GD+V VD K Sbjct: 190 DIVEGRVKNIIDKGAFVDIG-GFDGFIPLSEISWERIKNPREVLGMGDKVSIYILKVDEK 248 Query: 512 NRAISLSVRAKDEADEKDAIATVNKQE 538 N I+LS+R K+ ++ E Sbjct: 249 NEKITLSLRKVLPDPWKNVETKYHEGE 275 Score = 46.9 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 34/92 (36%) Query: 446 ALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKF 505 + G IV GKV V +G + + ++ +E S + D +V DE+ Sbjct: 11 KTLRPGDIVKGKVIKVSDEGIIANIDYKSDAFVPKNELSLNPNFDVKKTFNVEDELNLYI 70 Query: 506 TGVDRKNRAISLSVRAKDEADEKDAIATVNKQ 537 V+ + S D+ ++ I K Sbjct: 71 ISVENDEGNVLASKVMADDKLSREKIEKAYKN 102 >UniRef50_Q4EP69 Ribosomal protein S1, putative (Fragment) n=1 Tax=Listeria monocytogenes str. 1/2a F6854 RepID=Q4EP69_LISMO Length = 355 Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats. Identities = 106/300 (35%), Positives = 171/300 (57%), Gaps = 12/300 (4%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDA-GLKSESAIPAEQFKNAQGE 59 M+E LF+ ++ E G V G V +++ V V G K + +P + N E Sbjct: 63 MSED---LFDVEVRNFE--EGDKVTGTVTSVEDKQVYVGIPGSKLDGVVPISELSNIHVE 117 Query: 60 LE---IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKV 116 + VGD +D+ + VED +LS+ K +A ++ +E E V++ V Sbjct: 118 TASDVVSVGDTLDLIVTKVEDDI--LVLSKRKVDAEKASDDIKAKFESGEVFEAVVSDVV 175 Query: 117 KGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIES 176 KGG V+L G+RAF+P SLV+ V D +G L FKV++ + + N V++S RAV+E+ Sbjct: 176 KGGLVVDL-GVRAFVPASLVEDHFVEDFADYKGTTLTFKVVEFEPENNRVILSHRAVVET 234 Query: 177 ENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVN 236 E ++++ LL ++EG ++G V+ L ++GAFVD+GGVDGL+HI+ +++K + P E++ Sbjct: 235 EKASQKQALLSEIKEGDVIEGTVQRLANFGAFVDIGGVDGLVHISQISYKHIATPQEVLE 294 Query: 237 VGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI 296 G ++TVKV+ D E R+SL +K PW I ++ G+ L G+V L +G FVEI Sbjct: 295 EGQKVTVKVIGIDPENERISLSIKATLPGPWDGITEKAQVGSVLEGKVVRLVTFGAFVEI 354 Score = 178 bits (451), Expect = 6e-43, Method: Composition-based stats. Identities = 76/292 (26%), Positives = 143/292 (48%), Gaps = 16/292 (5%) Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLGG--VDGLLHITDMAWKRVKHPSEIVNVGDEITV 243 + N +EG +V G V ++ D +V + G +DG++ I++++ V+ S++V+VGD + + Sbjct: 72 VRNFEEGDKVTGTVTSVEDKQVYVGIPGSKLDGVVPISELSNIHVETASDVVSVGDTLDL 131 Query: 244 KVLKFDRERTRVSLGLKQL-GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 V K E + L +++ E I ++ G V+++ G V++ GV Sbjct: 132 IVTKV--EDDILVLSKRKVDAEKASDDIKAKFESGEVFEAVVSDVVKGGLVVDL--GVRA 187 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC----KANPWQQFA 358 V S + + + G + V++ + E R+ L + KA+ Q Sbjct: 188 FVPAS-LVEDHFVEDFADY--KGTTLTFKVVEFEPENNRVILSHRAVVETEKASQKQALL 244 Query: 359 ETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAV 418 +GD +EG ++ + +FG F+ + GG+DGLVH+S IS+ ++G ++ Sbjct: 245 SEIKEGDVIEGTVQRLANFGAFVDI-GGVDGLVHISQISYKHIAT-PQEVLEEGQKVTVK 302 Query: 419 VLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVEL 470 V+ +D E ERISL +K P++ + G+++ GKV + GA VE+ Sbjct: 303 VIGIDPENERISLSIKATLPGPWDGITEKAQVGSVLEGKVVRLVTFGAFVEI 354 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 83/338 (24%), Positives = 148/338 (43%), Gaps = 26/338 (7%) Query: 54 KNAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVIN 113 + E ++V E++ + + G +S + + + +E+ + VTG + Sbjct: 35 TSQADEASVKVASELE--IPKIRLTNGGLHMS------EDLFDVEVRNFEEGDKVTGTVT 86 Query: 114 GKVKGGFTVELNG--IRAFLPGSLVDVRPVRDTLHLE--GKELEFKVIKLDQKRNNVVVS 169 V + G + +P S + V + G L+ V K++ +V+S Sbjct: 87 SVEDKQVYVGIPGSKLDGVVPISELSNIHVETASDVVSVGDTLDLIVTKVEDD--ILVLS 144 Query: 170 RRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVK 229 +R V + D + + G + +V ++ G VDL GV + + + V+ Sbjct: 145 KRKV---DAEKASDDIKAKFESGEVFEAVVSDVVKGGLVVDL-GVRAFVPASLVEDHFVE 200 Query: 230 HPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGED----PWVAIAKRYPEGTKLTGRVT 285 ++ G +T KV++F+ E RV L + + E A+ EG + G V Sbjct: 201 DFADY--KGTTLTFKVVEFEPENNRVILSHRAVVETEKASQKQALLSEIKEGDVIEGTVQ 258 Query: 286 NLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLG 345 L ++G FV+I GV+GLVH+S++ + + P +V+ G V V V+ ID E RISL Sbjct: 259 RLANFGAFVDIG-GVDGLVHISQISYKH-IATPQEVLEEGQKVTVKVIGIDPENERISLS 316 Query: 346 LKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGL 383 +K PW E G +EGK+ + FG F+ + Sbjct: 317 IKATLPGPWDGITEKAQVGSVLEGKVVRLVTFGAFVEI 354 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 66/273 (24%), Positives = 126/273 (46%), Gaps = 15/273 (5%) Query: 262 LGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI-EEGVEGLVHVSEMDWTNKNIHPSK 320 + ED + + + EG K+TG VT++ D +V I ++G+V +SE+ + S Sbjct: 63 MSEDLFDVEVRNFEEGDKVTGTVTSVEDKQVYVGIPGSKLDGVVPISELSNIHVET-ASD 121 Query: 321 VVNVGDVVEVMVLDIDEERRRISLGLKQCKAN-PWQQFAETHNKGDRVEGKIKSITDFGI 379 VV+VGD ++++V ++++ + L ++ A G+ E + + G+ Sbjct: 122 VVSVGDTLDLIVTKVEDD--ILVLSKRKVDAEKASDDIKAKFESGEVFEAVVSDVVKGGL 179 Query: 380 FIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAED 439 + L G+ V S + + E +YK G + V++ + E R+ L + + E Sbjct: 180 VVDL--GVRAFVPASLVEDHFV--EDFADYK-GTTLTFKVVEFEPENNRVILSHRAVVET 234 Query: 440 PFNN----WVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVL 495 + ++ K+G ++ G V + GA V++ GV+G + S+ S + VL Sbjct: 235 EKASQKQALLSEIKEGDVIEGTVQRLANFGAFVDIG-GVDGLVHISQISYKHIATPQEVL 293 Query: 496 SVGDEVEAKFTGVDRKNRAISLSVRAKDEADEK 528 G +V K G+D +N ISLS++A Sbjct: 294 EEGQKVTVKVIGIDPENERISLSIKATLPGPWD 326 Score = 81.9 bits (201), Expect = 6e-14, Method: Composition-based stats. Identities = 51/218 (23%), Positives = 98/218 (44%), Gaps = 10/218 (4%) Query: 323 NVGDVVEVMVL-DIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFI 381 + D V V +++ + R++ G + + +GD+V G + S+ D +++ Sbjct: 36 SQADEASVKVASELEIPKIRLTNGGLHMSEDLFDVEVRNFEEGDKVTGTVTSVEDKQVYV 95 Query: 382 GLDG-GIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQL-AED 439 G+ G +DG+V +S++S N+ E A GD + +V +V E + + L +++ AE Sbjct: 96 GIPGSKLDGVVPISELS-NIHVETASDVVSVGDTLDLIVTKV--EDDILVLSKRKVDAEK 152 Query: 440 PFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGD 499 ++ A + G + V+ V G V+L GV ++ AS VED G Sbjct: 153 ASDDIKAKFESGEVFEAVVSDVVKGGLVVDL--GVRAFVPASLVEDHFVEDFADY--KGT 208 Query: 500 EVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQ 537 + K + +N + LS RA E ++ + + Sbjct: 209 TLTFKVVEFEPENNRVILSHRAVVETEKASQKQALLSE 246 >UniRef50_Q6MNP5 30S ribosomal protein S1 n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MNP5_BDEBA Length = 398 Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats. Identities = 114/351 (32%), Positives = 189/351 (53%), Gaps = 13/351 (3%) Query: 4 SFAQLFEESLKEIETR--PGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE 61 SF +LF +S K ++T+ G V G +++I K+ V G ++ I + + E++ Sbjct: 19 SFEELFAQSEKGMKTKLSVGDQVHGEILSIGKEEAFVATGTPTDGMILTKDLLDENKEVK 78 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 +VGD +D + +++ GE L++ K + + +LE A++ V G + GGF Sbjct: 79 YKVGDYIDCVVTSIKG--GEVRLAK-KGSMNASTDSLEDAFDMELPVEGRVTETCNGGFR 135 Query: 122 VELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 V + G AF P S +D R V+D GK+ +F + +LD K N+VVSRR V++ + + Sbjct: 136 VSIQGKTAFCPISQIDSRFVQDANEYVGKKFDFMITQLDPKGRNIVVSRRKVLDLQKAEN 195 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDE 240 + Q G ++G + L +GAFV+L G++GL+H+++++W RV P E+V G Sbjct: 196 EGTFMLKHQPGALLEGKIVRLEKFGAFVELEAGIEGLIHVSELSWSRVHDPKEVVMAGQP 255 Query: 241 ITVKVLKFDRERTR--VSLGLKQL--GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI 296 +TVK++K + R +SL LKQ +PW+ + +++P GT + G+V YG FV I Sbjct: 256 VTVKLIKMEEVDGRLKISLSLKQADGAGNPWMTVPQKFPVGTVVQGKVEKKETYGLFVNI 315 Query: 297 EEGVEGLVHVSEMDWTNKNIHPS-KVVNVGDVVEVMVLDIDEERRRISLGL 346 GV GL+ S+ W + + GD V V V I E ++ISL L Sbjct: 316 APGVTGLLPRSK--WRDSVDAAQYENKKRGDDVTVQVDQIMFEEKKISLAL 364 Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats. Identities = 94/391 (24%), Positives = 160/391 (40%), Gaps = 25/391 (6%) Query: 172 AVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKH 230 A E + + L G +V G + ++ AFV G DG++ D+ ++ Sbjct: 18 ASFEELFAQSEKGMKTKLSVGDQVHGEILSIGKEEAFVATGTPTDGMILTKDLLD---EN 74 Query: 231 PSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDY 290 VGD I V + V L K ++ + + GRVT + Sbjct: 75 KEVKYKVGDYIDCVVTSI--KGGEVRLAKKGSMNASTDSLEDAFDMELPVEGRVTETCNG 132 Query: 291 GCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC- 349 G V I+ G +S++D + ++ V G + M+ +D + R I + ++ Sbjct: 133 GFRVSIQ-GKTAFCPISQID-SRFVQDANEYV--GKKFDFMITQLDPKGRNIVVSRRKVL 188 Query: 350 ---KANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAV 406 KA F H G +EGKI + FG F+ L+ GI+GL+H+S++SW+ + Sbjct: 189 DLQKAENEGTFMLKHQPGALLEGKIVRLEKFGAFVELEAGIEGLIHVSELSWSRVHD-PK 247 Query: 407 REYKKGDEIAAVVLQVDAERER--ISLGVKQL--AEDPFNNWVALNKKGAIVTGKVTAVD 462 G + +++++ R ISL +KQ A +P+ G +V GKV + Sbjct: 248 EVVMAGQPVTVKLIKMEEVDGRLKISLSLKQADGAGNPWMTVPQKFPVGTVVQGKVEKKE 307 Query: 463 AKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAK 522 G V +A GV G L S+ GD+V + + + + ISL++ + Sbjct: 308 TYGLFVNIAPGVTGLLPRSKWRDSVDAAQYENKKRGDDVTVQVDQIMFEEKKISLALPGE 367 Query: 523 DEADEKDAIATVNKQEDANFSNNAMAEAFKA 553 E + +T + AMAEA K Sbjct: 368 AEDHSWKSHSTTSS------GLGAMAEALKG 392 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 55/285 (19%), Positives = 114/285 (40%), Gaps = 16/285 (5%) Query: 245 VLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLV 304 + D T+ ++L + + G ++ G + ++ FV +G++ Sbjct: 6 IFGDDINETKDFASFEELFAQSEKGMKTKLSVGDQVHGEILSIGKEEAFVATGTPTDGMI 65 Query: 305 HVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKG 364 ++ NK + VGD ++ +V I + + L K + + Sbjct: 66 LTKDLLDENKEVK----YKVGDYIDCVVTSI--KGGEVRLAKKGSMNASTDSLEDAFDME 119 Query: 365 DRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDA 424 VEG++ + G + + G +S I + G + ++ Q+D Sbjct: 120 LPVEGRVTETCNGGFRVSIQGK-TAFCPISQIDSRFVQDANE---YVGKKFDFMITQLDP 175 Query: 425 ERERISLGVKQLAE----DPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRA 480 + I + +++ + + ++ ++ GA++ GK+ ++ GA VEL G+EG + Sbjct: 176 KGRNIVVSRRKVLDLQKAENEGTFMLKHQPGALLEGKIVRLEKFGAFVELEAGIEGLIHV 235 Query: 481 SEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRA--ISLSVRAKD 523 SE S RV D V+ G V K ++ + ISLS++ D Sbjct: 236 SELSWSRVHDPKEVVMAGQPVTVKLIKMEEVDGRLKISLSLKQAD 280 Score = 43.0 bits (100), Expect = 0.029, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 34/83 (40%), Gaps = 3/83 (3%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEI---QVGDEVDVALD 73 + G++V+G V + + V+ +P +++++ + + GD+V V +D Sbjct: 292 KFPVGTVVQGKVEKKETYGLFVNIAPGVTGLLPRSKWRDSVDAAQYENKKRGDDVTVQVD 351 Query: 74 AVEDGFGETLLSREKAKRHEAWI 96 + + L+ +W Sbjct: 352 QIMFEEKKISLALPGEAEDHSWK 374 >UniRef50_A6GGH5 Ribosomal protein S1 n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GGH5_9DELT Length = 391 Score = 257 bits (657), Expect = 7e-67, Method: Composition-based stats. Identities = 122/392 (31%), Positives = 184/392 (46%), Gaps = 22/392 (5%) Query: 3 ESFAQLFEESLKEIETR-------PGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN 55 + FA LFE+S+ R PG V+ VV I + V VD G +SE I + +N Sbjct: 5 DDFAALFEQSVSGGGDRSSGKRLSPGESVQATVVQIGRQTVFVDVGTRSEGEIDVHELQN 64 Query: 56 AQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGK 115 +GEL ++VGD + + D + + LE A E VTG + Sbjct: 65 EKGELTVKVGDRLRAIVQTGGDRPKLVM----RFGGSGGIGDLELALESGAPVTGTVTKA 120 Query: 116 VKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIE 175 VKGG V++ RAF P S V V D EG+ L FKV+++ K +VVVSR+A+++ Sbjct: 121 VKGGLEVQIGKTRAFCPASHVHVAYTPDISIYEGQSLAFKVLEIRDKGRSVVVSRKALLQ 180 Query: 176 SENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIV 235 E + LLE L EG V G V+ + YGAFVDLGGV+GL+HI+++ RV+ ++V Sbjct: 181 EEREQKGKALLEQLAEGQIVTGTVQTIQPYGAFVDLGGVEGLIHISELGHGRVERVEDVV 240 Query: 236 NVGDEITVKVLKFDRERT----RVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYG 291 +VG++I VKVL + R+SL L+Q + A+ E + V + +G Sbjct: 241 SVGEQIRVKVLTIEPGDGKVATRISLSLRQAEQ--GAGPAQAGSERKVVDAEVVKVETFG 298 Query: 292 CFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKA 351 FVE G+V E+D P + VG V V+ + D ++ R +++ + Sbjct: 299 VFVETATS-GGIVPTRELDL-PPGGDPRRAYPVGKQVRVVAIGTD-DKGRTRFSMRRVEE 355 Query: 352 NPWQQFAETHNKGDRVEGKIKSITDFGIFIGL 383 + + D G F L Sbjct: 356 TEARANFKQFRAKQSKGQN--KRGDMGSFGEL 385 Score = 151 bits (382), Expect = 6e-35, Method: Composition-based stats. Identities = 83/381 (21%), Positives = 141/381 (37%), Gaps = 29/381 (7%) Query: 187 ENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSEIVNVGDEITVKV 245 + L G V+ V + FVD+G +G + + ++ + V VGD + V Sbjct: 25 KRLSPGESVQATVVQIGRQTVFVDVGTRSEGEIDVHELQN---EKGELTVKVGDRLRAIV 81 Query: 246 LKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVH 305 R L ++ G + G +TG VT G V+I Sbjct: 82 Q---TGGDRPKLVMRFGGSGGIGDLELALESGAPVTGTVTKAVKGGLEVQIG-KTRAFCP 137 Query: 306 VSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQF----AETH 361 S + + P + G + VL+I ++ R + + K +Q E Sbjct: 138 ASHV---HVAYTPDISIYEGQSLAFKVLEIRDKGRSVVVSRKALLQEEREQKGKALLEQL 194 Query: 362 NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQ 421 +G V G +++I +G F+ L GG++GL+H+S++ E G++I VL Sbjct: 195 AEGQIVTGTVQTIQPYGAFVDL-GGVEGLIHISELGHGRV-ERVEDVVSVGEQIRVKVLT 252 Query: 422 VDAERE----RISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGY 477 ++ RISL ++Q + + +V +V V+ G VE A G Sbjct: 253 IEPGDGKVATRISLSLRQAEQG--AGPAQAGSERKVVDAEVVKVETFGVFVETATS-GGI 309 Query: 478 LRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDE----ADEKDAIAT 533 + E D VG +V G D S+R +E A+ K A Sbjct: 310 VPTRELDLPPGGDPRRAYPVGKQVRVVAIGTD-DKGRTRFSMRRVEETEARANFKQFRAK 368 Query: 534 VNKQEDANFSNNAMAEAFKAA 554 +K ++ + E KA Sbjct: 369 QSKGQNKRGDMGSFGELLKAK 389 >UniRef50_B4UDY4 RNA binding S1 domain protein n=4 Tax=Anaeromyxobacter RepID=B4UDY4_ANASK Length = 537 Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats. Identities = 109/364 (29%), Positives = 171/364 (46%), Gaps = 27/364 (7%) Query: 4 SFAQLFEESL--KEIETRPGSIVRGVVVAIDKDVVLVDAGLK-SESAIPAEQFKNAQGEL 60 SFA + S + G V G ++ I +DV ++ G +E+ I + K+ G + Sbjct: 137 SFADMLAGSEAGPRRRFQVGEKVAGKIIQIGEDVAFLELGSGVAEAMIETVELKDEAGNV 196 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 +VGD +D + D +A R A + +A V GV+ KGG Sbjct: 197 AARVGDIIDAVVVKATDRGAVVSKGHGRATRDNARDAVIEAAHTGLPVEGVVKAVNKGGL 256 Query: 121 TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 VE++G+RAF P S +DVR V D G++L FKV + D + V+SRRA++E E + Sbjct: 257 EVEVHGVRAFCPISQIDVRFVGDASSFVGQKLLFKVTRADA--RDAVLSRRALLEEERAH 314 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 + + L G G+V ++ DYGAFVD+GGV+GL+H++++AW RV P ++++ GD Sbjct: 315 KAAETRARLAPGAVFDGVVTSVQDYGAFVDIGGVEGLVHVSELAWDRVSKPQDLLSAGDA 374 Query: 241 ITVKVLKFDRERT---RVSLGLK----------------QLGEDPWVAIAKRYPEGTKLT 281 + V+VL+ D + R+ L +K G + Sbjct: 375 VQVQVLRIDEDPKKGERIGLSVKALAPRPEPAAPAPGAEGAERPARPTPPPPPRVGDVVQ 434 Query: 282 GRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRR 341 V + +G FV G GLV SE T + + VGD ++ +V ID E+ R Sbjct: 435 ATVDKVESFGVFVRFAGG-RGLVPASE-TGTPRGADLRRSFKVGDTLQALVSAID-EQGR 491 Query: 342 ISLG 345 I L Sbjct: 492 IRLS 495 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 87/356 (24%), Positives = 141/356 (39%), Gaps = 39/356 (10%) Query: 189 LQEGMEVKGIVKNLTDYGAFVDLGG--VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVL 246 Q G +V G + + + AF++LG + ++ ++ + + VGD I V+ Sbjct: 153 FQVGEKVAGKIIQIGEDVAFLELGSGVAEAMIETVELKDEAGNVAA---RVGDIIDAVVV 209 Query: 247 KFDRERTRVSLGL-KQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVH 305 K VS G + ++ A+ + G + G V + G VE+ GV Sbjct: 210 KATDRGAVVSKGHGRATRDNARDAVIEAAHTGLPVEGVVKAVNKGGLEVEV-HGVRAFCP 268 Query: 306 VSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAE----TH 361 +S++D S V G + V D R L + A Sbjct: 269 ISQIDVRFVGDASSFV---GQKLLFKVTRADA--RDAVLSRRALLEEERAHKAAETRARL 323 Query: 362 NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQ 421 G +G + S+ D+G F+ + GG++GLVH+S+++W+ + GD + VL+ Sbjct: 324 APGAVFDGVVTSVQDYGAFVDI-GGVEGLVHVSELAWDRVSK-PQDLLSAGDAVQVQVLR 381 Query: 422 VD---AERERISLGVKQLAEDPFNNWVALNK----------------KGAIVTGKVTAVD 462 +D + ERI L VK LA P A G +V V V+ Sbjct: 382 IDEDPKKGERIGLSVKALAPRPEPAAPAPGAEGAERPARPTPPPPPRVGDVVQATVDKVE 441 Query: 463 AKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLS 518 + G V A G G + ASE R D VGD ++A + +D + I LS Sbjct: 442 SFGVFVRFAGG-RGLVPASETGTPRGADLRRSFKVGDTLQALVSAID-EQGRIRLS 495 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 65/258 (25%), Positives = 117/258 (45%), Gaps = 20/258 (7%) Query: 272 KRYPEGTKLTGRVTNLTDYGCFVEIEEGV-EGLVHVSEMDWTNKNIHPSKVVNVGDVVEV 330 +R+ G K+ G++ + + F+E+ GV E ++ E+ N+ VGD+++ Sbjct: 151 RRFQVGEKVAGKIIQIGEDVAFLELGSGVAEAMIETVELKDEAGNVAAR----VGDIIDA 206 Query: 331 MVLDIDEERRRISLGL-KQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDG 389 +V+ + +S G + + N E + G VEG +K++ G+ + + G+ Sbjct: 207 VVVKATDRGAVVSKGHGRATRDNARDAVIEAAHTGLPVEGVVKAVNKGGLEVEV-HGVRA 265 Query: 390 LVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNK 449 +S I G+ + G ++ V + DA L + L E+ + A + Sbjct: 266 FCPISQIDVRFVGDASSF---VGQKLLFKVTRADARD--AVLSRRALLEEERAHKAAETR 320 Query: 450 ----KGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKF 505 GA+ G VT+V GA V++ GVEG + SE + DRV +LS GD V+ + Sbjct: 321 ARLAPGAVFDGVVTSVQDYGAFVDIG-GVEGLVHVSELAWDRVSKPQDLLSAGDAVQVQV 379 Query: 506 TGVDRKNR---AISLSVR 520 +D + I LSV+ Sbjct: 380 LRIDEDPKKGERIGLSVK 397 Score = 65.0 bits (157), Expect = 7e-09, Method: Composition-based stats. Identities = 45/191 (23%), Positives = 74/191 (38%), Gaps = 11/191 (5%) Query: 345 GLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGI-DGLVHLSDISWNVAGE 403 A G++V GKI I + F+ L G+ + ++ ++ Sbjct: 137 SFADMLAGSEAGPRRRFQVGEKVAGKIIQIGEDVAFLELGSGVAEAMIETVELKDEAGNV 196 Query: 404 EAVREYKKGDEIAAVVLQVDAERERISLGV-KQLAEDPFNNWVALNKKGAIVTGKVTAVD 462 A + GD I AVV++ +S G + ++ + + G V G V AV+ Sbjct: 197 AA----RVGDIIDAVVVKATDRGAVVSKGHGRATRDNARDAVIEAAHTGLPVEGVVKAVN 252 Query: 463 AKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAK 522 G VE+ GV + S+ V DA+ VG ++ K T D ++ LS RA Sbjct: 253 KGGLEVEVH-GVRAFCPISQIDVRFVGDASSF--VGQKLLFKVTRADARDA--VLSRRAL 307 Query: 523 DEADEKDAIAT 533 E + A Sbjct: 308 LEEERAHKAAE 318 >UniRef50_Q14690 Protein RRP5 homolog n=24 Tax=Metazoa RepID=RRP5_HUMAN Length = 1871 Score = 254 bits (648), Expect = 8e-66, Method: Composition-based stats. Identities = 116/543 (21%), Positives = 208/543 (38%), Gaps = 40/543 (7%) Query: 10 EESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVD 69 ++S PG +V+ V + + ++ + + + V Sbjct: 270 QQSWNLNNLLPGLVVKAQVQKVTPFGLTLNFLTFFTGVVDFMHL-DPKKAGTYFSNQAVR 328 Query: 70 VALDAVEDGFGETLLSREKAKRHEAWITLEKAYED------AETVTGVINGKVKGGFTVE 123 + V LS + ++ V G K G T Sbjct: 329 ACILCVHPRTRVVHLSLRPIFLQPGRPLTRLSCQNLGAVLDDVPVQGFFK---KAGATFR 385 Query: 124 L-NGIRAFLPGSLV-DVRPVRDTLHLE-GKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 L +G+ A+ S + D + V + + G + ++I Q ++S R I Sbjct: 386 LKDGVLAYARLSHLSDSKNVFNPEAFKPGNTHKCRIIDYSQMDELALLSLRTSIIEAQYL 445 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGD 239 +++ G VKG V + YG V +G + GL+ +A +K+P + ++GD Sbjct: 446 R----YHDIEPGAVVKGTVLTIKSYGMLVKVGEQMRGLVPPMHLADILMKNPEKKYHIGD 501 Query: 240 EITVKVLKFDRERTRVSLGLKQLGED---PWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI 296 E+ +VL D E ++ + LK+ + P + G + G + + DYGC V+ Sbjct: 502 EVKCRVLLCDPEAKKLMMTLKKTLIESKLPVITCYADAKPGLQTHGFIIRVKDYGCIVKF 561 Query: 297 EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLK-QCKANPWQ 355 V+GLV E+ T P +V G VV+V+VL+ + + R+ L K P + Sbjct: 562 YNNVQGLVPKHELS-TEYIPDPERVFYTGQVVKVVVLNCEPSKERMLLSFKLSSDPEPKK 620 Query: 356 QFA-------ETHNKGDRVEGKIKSITDFGIFIG-LDGGIDGLVHLSDISWNVAGEEAVR 407 + A + N G V+ K+ T G+ + L I + S +S +VA + Sbjct: 621 EPAGHSQKKGKAINIGQLVDVKVLEKTKDGLEVAVLPHNIRAFLPTSHLSDHVANGPLLH 680 Query: 408 EYKKGDEIAAVVLQVDAERERISLGVKQLA-------EDPFNNWVALNKKGAIVTGKVTA 460 + + +I VL + R+ L K +DP N + G ++ G V + Sbjct: 681 HWLQAGDILHRVLCLSQSEGRVLLCRKPALVSTVEGGQDPKN--FSEIHPGMLLIGFVKS 738 Query: 461 VDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 + G ++ G+ G + S V + G V AK T VD + + + LS+R Sbjct: 739 IKDYGVFIQFPSGLSGLAPKAIMSDKFVTSTSDHFVEGQTVAAKVTNVDEEKQRMLLSLR 798 Query: 521 AKD 523 D Sbjct: 799 LSD 801 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 104/595 (17%), Positives = 210/595 (35%), Gaps = 58/595 (9%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE- 61 E F L ESL E G + G V +++ +++ + + + +A + Sbjct: 70 EKFEILSVESLCE-----GMRILGCVKEVNELELVISLPNGLQGFVQVTEICDAYTKKLN 124 Query: 62 ------------------IQVGDEVDVALDAV---EDGFGETLLSREKAKRHEAWITLEK 100 G V + ++ + G LS + + Sbjct: 125 EQVTQEQPLKDLLHLPELFSPGMLVRCVVSSLGITDRGKKSVKLSLNPKNVNRVLSA--E 182 Query: 101 AYEDAETVTGVINGKVKGGFTVEL--NGIRAFLP--GSLVDVRPVRDTLHL-EGKELEFK 155 A + +TG ++ G+ V++ +G RAFLP + +R L G+ L Sbjct: 183 ALKPGMLLTGTVSSLEDHGYLVDIGVDGTRAFLPLLKAQEYIRQKNKGAKLKVGQYLNCI 242 Query: 156 VIKLDQKRN--NVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-- 211 V K+ ++ V V + + ++ L NL G+ VK V+ +T +G ++ Sbjct: 243 VEKVKGNGGVVSLSVGHSEVSTAIATEQQSWNLNNLLPGLVVKAQVQKVTPFGLTLNFLT 302 Query: 212 --GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVA 269 GV +H+ K + + +L V L L+ + P Sbjct: 303 FFTGVVDFMHLD------PKKAGTYFS-NQAVRACILCVHPRTRVVHLSLRPIFLQPGRP 355 Query: 270 IAK--RYPEGTKLTGRVTN--LTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVG 325 + + G L G +++GV +S + + +P + G Sbjct: 356 LTRLSCQNLGAVLDDVPVQGFFKKAGATFRLKDGVLAYARLSHLSDSKNVFNP-EAFKPG 414 Query: 326 DVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDG 385 + + ++D + L L+ G V+G + +I +G+ + + Sbjct: 415 NTHKCRIIDYSQMDELALLSLRTSIIEAQYLRYHDIEPGAVVKGTVLTIKSYGMLVKVGE 474 Query: 386 GIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQL---AEDPFN 442 + GLV ++ ++ + ++Y GDE+ VL D E +++ + +K+ ++ P Sbjct: 475 QMRGLVPPMHLA-DILMKNPEKKYHIGDEVKCRVLLCDPEAKKLMMTLKKTLIESKLPVI 533 Query: 443 NWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVE 502 A K G G + V G V+ + V+G + E S + + D V G V+ Sbjct: 534 TCYADAKPGLQTHGFIIRVKDYGCIVKFYNNVQGLVPKHELSTEYIPDPERVFYTGQVVK 593 Query: 503 AKFTGVDRKNRAISLSVRAKDEADEKDAIA--TVNKQEDANFSNNAMAEAFKAAK 555 + + LS + + + K A + K + N + + K Sbjct: 594 VVVLNCEPSKERMLLSFKLSSDPEPKKEPAGHSQKKGKAINIGQLVDVKVLEKTK 648 Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats. Identities = 108/606 (17%), Positives = 199/606 (32%), Gaps = 80/606 (13%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVE 76 E PG + VV + +D +V +G + + G+ E++ G + V + V+ Sbjct: 842 EMTPGMFLDLVVQEVLEDGSVVFSGGPVPDLVLKASRYHRAGQ-EVESGQKKKVVILNVD 900 Query: 77 DGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLV 136 E +S + + L K E V + VE + AF S + Sbjct: 901 LLKLEVHVSLHQDLVNRKARKLRKGSEHQAIVQHLEKSFAIASL-VETGHLAAFSLTSHL 959 Query: 137 DVRPVRDTLHL-EGKELEFKVIKLDQK-------------RNNVVVSRRAVIESENSAER 182 + D+ L G+ + + + + + +++ + E Sbjct: 960 NDTFRFDSEKLQVGQGVSLTLKTTEPGVTGLLLAVEGPAAKRTMRPTQKDSETVDEDEEV 1019 Query: 183 DQLL-------ENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVK--HPS 232 D L L G V G VK++ V L G+ G +H + + + P+ Sbjct: 1020 DPALTVGTIKKHTLSIGDMVTGTVKSIKPTHVVVTLEDGIIGCIHASHILDDVPEGTSPT 1079 Query: 233 EIVNVGDEITVKVLKFDRERTRVSL---------GLKQLGEDPWVAIAKRYPEGTKLTGR 283 + VG +T +V+ +T L + +L P T Sbjct: 1080 TKLKVGKTVTARVIGGRDMKTFKYLPISHPRFVRTIPELSVRPSELEDGHTALNTHSVSP 1139 Query: 284 VTNLTDYG------CF------------VEIEEGVEGLVHVSEMDWTNKNI-HPSKVVNV 324 + + Y CF VEI + G + + + K + HP K V Sbjct: 1140 MEKIKQYQAGQTVTCFLKKYNVVKKWLEVEIAPDIRGRIPLLLTSLSFKVLKHPDKKFRV 1199 Query: 325 GDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDF-GIFIGL 383 G + V+ D + + L L +G+ G++ +T G+ + Sbjct: 1200 GQALRATVVGPDSSKTLLCLSL---------TGPHKLEEGEVAMGRVVKVTPNEGLTVSF 1250 Query: 384 DGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGV---------K 434 G G V + +S + E + ++ + +L ++L + K Sbjct: 1251 PFGKIGTVSIFHMSDSY-SETPLEDFVPQKVVRCYILS--TADNVLTLSLRSSRTNPETK 1307 Query: 435 QLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDA--- 491 EDP N + K+G ++ G V ++ G L V G R S S+ Sbjct: 1308 SKVEDPEINSIQDIKEGQLLRGYVGSIQPHGVFFRLGPSVVGLARYSHVSQHSPSKKALY 1367 Query: 492 TLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAF 551 L G + A+ ++ + + LS D A++ Q AE Sbjct: 1368 NKHLPEGKLLTARVLRLNHQKNLVELSFLPGDTGKPDVLSASLEGQLTKQEERKTEAEE- 1426 Query: 552 KAAKGE 557 + KGE Sbjct: 1427 RDQKGE 1432 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 94/619 (15%), Positives = 195/619 (31%), Gaps = 111/619 (17%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA---QGELEIQVGDEVDVALD 73 E PG ++ G V +I V + P + G V + Sbjct: 725 EIHPGMLLIGFVKSIKDYGVFIQFPSGLSGLAPKAIMSDKFVTSTSDHFVEGQTVAAKVT 784 Query: 74 AVEDGFGETLLSREKAK----------------RHEAWITLEKAYEDAETVTGVINGKVK 117 V++ LLS + E + + ++V ++ Sbjct: 785 NVDEEKQRMLLSLRLSDCGLGDLAITSLLLLNQCLEELQGVRSLMSNRDSVLIQTLAEMT 844 Query: 118 GGFTVEL-------NGIRAFLPGSLVDV-----RPVRDTLHLE-GKELEFKVIKLDQKRN 164 G ++L +G F G + D+ R R +E G++ + ++ +D + Sbjct: 845 PGMFLDLVVQEVLEDGSVVFSGGPVPDLVLKASRYHRAGQEVESGQKKKVVILNVDLLKL 904 Query: 165 NVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGA---FVDLGGVDGLLHIT 221 V VS + + + + L++G E + IV++L A V+ G + + Sbjct: 905 EVHVSLHQDLVNRKARK-------LRKGSEHQAIVQHLEKSFAIASLVETGHLAAFSLTS 957 Query: 222 DMAWKRVKHPSEIVNVGDEITVKVLKFDR---------ERTRVSLGLKQLGEDPWVAIAK 272 + SE + VG +++ + + E ++ +D Sbjct: 958 HLNDTFRFD-SEKLQVGQGVSLTLKTTEPGVTGLLLAVEGPAAKRTMRPTQKDSETVDED 1016 Query: 273 RY---------------PEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSE-MDWTNKNI 316 G +TG V ++ V +E+G+ G +H S +D + Sbjct: 1017 EEVDPALTVGTIKKHTLSIGDMVTGTVKSIKPTHVVVTLEDGIIGCIHASHILDDVPEGT 1076 Query: 317 HPSKVVNVGDVVEVMVL-DIDEERRRI-------------SLGLKQCKANP--------- 353 P+ + VG V V+ D + + L ++ + Sbjct: 1077 SPTTKLKVGKTVTARVIGGRDMKTFKYLPISHPRFVRTIPELSVRPSELEDGHTALNTHS 1136 Query: 354 --WQQFAETHNKGDRVEGKIK--SITDFGIFIGLDGGIDGLVHLSDISWN-VAGEEAVRE 408 + + + G V +K ++ + + + I G + L S + + ++ Sbjct: 1137 VSPMEKIKQYQAGQTVTCFLKKYNVVKKWLEVEIAPDIRGRIPLLLTSLSFKVLKHPDKK 1196 Query: 409 YKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAK-GAT 467 ++ G + A V+ D+ + + L + ++G + G+V V G T Sbjct: 1197 FRVGQALRATVVGPDSSKTLLCLSL---------TGPHKLEEGEVAMGRVVKVTPNEGLT 1247 Query: 468 VELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAK---DE 524 V G G + S E V + ++LS+R+ E Sbjct: 1248 VSFPFGKIGTVSIFHMSDSYSETPLEDFVPQKVVRCYILS--TADNVLTLSLRSSRTNPE 1305 Query: 525 ADEKDAIATVNKQEDANFS 543 K +N +D Sbjct: 1306 TKSKVEDPEINSIQDIKEG 1324 Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats. Identities = 75/390 (19%), Positives = 142/390 (36%), Gaps = 37/390 (9%) Query: 162 KRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHI 220 K + + +R +S +E+L EGM + G VK + + + L G+ G + + Sbjct: 53 KTKKLKIEKRESSKSAREKFEILSVESLCEGMRILGCVKEVNELELVISLPNGLQGFVQV 112 Query: 221 TDMAWKRVK----------------HPSEIVNVGDEITVKVLKF---DRERTRVSLGLKQ 261 T++ K H E+ + G + V DR + V L L Sbjct: 113 TEICDAYTKKLNEQVTQEQPLKDLLHLPELFSPGMLVRCVVSSLGITDRGKKSVKLSLNP 172 Query: 262 LGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE-EGVEGLVHVSEMDWTNKNIHPSK 320 + ++ P G LTG V++L D+G V+I +G + + + + + Sbjct: 173 KNVNRVLSAEALKP-GMLLTGTVSSLEDHGYLVDIGVDGTRAFLPLLKAQEYIRQKNKGA 231 Query: 321 VVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHN------KGDRVEGKIKSI 374 + VG + +V + +SL + + + + G V+ +++ + Sbjct: 232 KLKVGQYLNCIVEKVKGNGGVVSLSVGHSEVSTAIATEQQSWNLNNLLPGLVVKAQVQKV 291 Query: 375 TDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVK 434 T FG+ + G+V + AG Y + A +L V + L ++ Sbjct: 292 TPFGLTLNFLTFFTGVVDFMHLDPKKAGT-----YFSNQAVRACILCVHPRTRVVHLSLR 346 Query: 435 QLAEDPFN--NWVALNKKGAIV-TGKVTA-VDAKGATVELADGVEGYLRASEASRDRVED 490 + P ++ GA++ V GAT L DGV Y R S S + Sbjct: 347 PIFLQPGRPLTRLSCQNLGAVLDDVPVQGFFKKAGATFRLKDGVLAYARLSHLSDSKNVF 406 Query: 491 ATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 G+ + + + + LS+R Sbjct: 407 NPEAFKPGNTHKCRIIDYSQMDELALLSLR 436 >UniRef50_A9NGK8 Small subunit ribosomal protein S1 n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NGK8_ACHLI Length = 470 Score = 254 bits (648), Expect = 8e-66, Method: Composition-based stats. Identities = 113/448 (25%), Positives = 210/448 (46%), Gaps = 21/448 (4%) Query: 16 IETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE---IQVGDEVDVAL 72 I + G I+ G V + K+ VL+D +E I AE F E I+ GD+V + Sbjct: 5 IIPKKGQIIEGEVFQVKKNYVLLDINAATEGTIYAEYFDRPAPEDLRKVIKKGDKVRAKV 64 Query: 73 DAV--EDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAF 130 + + +D +LSR + ++KA+++ + V+ G + GI F Sbjct: 65 EKISEDDRSSLIMLSRLPLLHEKNMEKIQKAFDEKLEIETVVKSANDKGLVLNFEGIELF 124 Query: 131 LPGSLVDVRPVRDTLHLEGKELEFKVIKL--DQKRNNVVVSRRAVIESENSAERDQL--- 185 LP SL+D L G+ L + + D+KR ++ +R+ + E+ E+ Q Sbjct: 125 LPYSLLDFELKDQKDKLIGQSLVVLIEEFKADRKRPKLIATRKPIFEARRQEEQQQRQEA 184 Query: 186 ----LENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEI 241 LE + G ++G+V++ + AFV V G+L I+ ++ R+ +++ +G ++ Sbjct: 185 RQEELETITTGAVLEGVVESFETHAAFVRFEHVSGMLRISQVSHHRIDKIEDVLEIGQKV 244 Query: 242 TVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVE 301 VKV+K +E R+ L +K L P+ A K + G + G+V + +G VE++ V+ Sbjct: 245 QVKVIK--KEGNRLDLSMKALQPTPYEAYLKAHKVGETVKGKVVSKLPFGILVELDRDVK 302 Query: 302 GLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETH 361 GL+H SE W N + + + D +E ++L D ++ RISL K + NPW + Sbjct: 303 GLLHKSEYSW-NPQSNFDAYIKIDDEIEAVILSKDAKKERISLSKKVLEDNPWAKL--NL 359 Query: 362 NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQ 421 G +E +I+ +T + + + +DG++ ++ + N Y+ GD + A V++ Sbjct: 360 RVGQDIEVRIEEVTKEEVKVSFES-VDGIIPKNE-AHNDPKVNIDEYYQVGDTVKAKVIE 417 Query: 422 VDAERERISLGVKQLAEDPFNNWVALNK 449 + + + L VK+L Sbjct: 418 FNKQNWVLKLSVKRLLNLQERQEFEKYM 445 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 106/460 (23%), Positives = 202/460 (43%), Gaps = 31/460 (6%) Query: 103 EDAETVTGVINGKVKGGFTVELNG-IRAFLPGSLVDVRPVRDTLHLE--GKELEFKVIKL 159 + + + G + K +++N + D D + G ++ KV K+ Sbjct: 8 KKGQIIEGEVFQVKKNYVLLDINAATEGTIYAEYFDRPAPEDLRKVIKKGDKVRAKVEKI 67 Query: 160 DQKRNN--VVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGL 217 + + +++SR ++ +N + + + E +E++ +VK+ D G ++ G++ Sbjct: 68 SEDDRSSLIMLSRLPLLHEKNMEKIQKAFD---EKLEIETVVKSANDKGLVLNFEGIELF 124 Query: 218 LHITDMAWKRVKHPSEIVNVGDEITVKVLKF--DRERTRVSLGLKQLGEDPWVAIA---- 271 L + + +K + + +G + V + +F DR+R ++ K + E Sbjct: 125 LPYS-LLDFELKDQKDKL-IGQSLVVLIEEFKADRKRPKLIATRKPIFEARRQEEQQQRQ 182 Query: 272 -------KRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNV 324 + G L G V + + FV E V G++ +S++ ++ V+ + Sbjct: 183 EARQEELETITTGAVLEGVVESFETHAAFVRFE-HVSGMLRISQVSH-HRIDKIEDVLEI 240 Query: 325 GDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLD 384 G V+V V I +E R+ L +K + P++ + + H G+ V+GK+ S FGI + LD Sbjct: 241 GQKVQVKV--IKKEGNRLDLSMKALQPTPYEAYLKAHKVGETVKGKVVSKLPFGILVELD 298 Query: 385 GGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNW 444 + GL+H S+ SWN K DEI AV+L DA++ERISL K L ++P+ Sbjct: 299 RDVKGLLHKSEYSWN-PQSNFDAYIKIDDEIEAVILSKDAKKERISLSKKVLEDNPWAKL 357 Query: 445 VALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAK 504 + G + ++ V + V + V+G + +EA D + VGD V+AK Sbjct: 358 --NLRVGQDIEVRIEEVTKEEVKVSF-ESVDGIIPKNEAHNDPKVNIDEYYQVGDTVKAK 414 Query: 505 FTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSN 544 +++N + LSV+ E+ D S Sbjct: 415 VIEFNKQNWVLKLSVKRLLNLQERQEFEKYMGDADEAESL 454 >UniRef50_C9XMD9 Putative 30S ribosomal protein S1 n=7 Tax=Clostridium RepID=C9XMD9_CLODC Length = 424 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 104/399 (26%), Positives = 187/399 (46%), Gaps = 38/399 (9%) Query: 4 SFAQLFEESLKEI-ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQF---KNAQGE 59 + +L ++ + + + G + G + A+ D V + + IP + KN E Sbjct: 9 TMQELLDQQEQVFSKVKVGELTTGKITAVRNDEVQLGLDYGFDGIIPISELNIEKNQYIE 68 Query: 60 LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGG 119 +GDE+ + V G LS+ + + + L+KAY++ +T + + G Sbjct: 69 DIYHIGDEITAVITKVSQKDGTITLSKLQLDKRNDFAELQKAYDEHRIITVNVEKNIDKG 128 Query: 120 FTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 N F+P S +D + + DT G LE + +LD ++N +V S R V++ + Sbjct: 129 VFANYNTYTFFIPISQLDTKFITDTSKFVGLNLEVYIKELDVRKNRLVASHRDVLQERIN 188 Query: 180 AERDQ---------------------------------LLENLQEGMEVKGIVKNLTDYG 206 ER++ L +L+ G + G V + YG Sbjct: 189 KEREERRAQIKAEKEAERARIKQEREEEKARIKAAKEDLFNSLEVGQKRDGKVTKIMPYG 248 Query: 207 AFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDP 266 AFVD+GG++GL HI ++AW RV+ ++V+ G E+ V VL ++E +++L LK + DP Sbjct: 249 AFVDIGGIEGLAHINNLAWTRVESVEDVVSEGQEVEVYVLDVNKETKKIALALKDINNDP 308 Query: 267 WVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGD 326 W IAK + +V + + G FV+I+EGV+ + +SE+ T + + VVN+GD Sbjct: 309 WDLIAKEVQIDDVVNAKVLRIIEKGAFVQIKEGVDAYLPISELSDT-RVAKVTNVVNIGD 367 Query: 327 VVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGD 365 V+V +LD + +R+ + +K+ P + E + Sbjct: 368 EVKVKILDFKPKTKRMLVSIKEATREPEEDITEYLEVEE 406 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 96/428 (22%), Positives = 187/428 (43%), Gaps = 49/428 (11%) Query: 166 VVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMA 224 + + + E +++Q+ ++ G G + + + + L G DG++ I+++ Sbjct: 1 MFIMENDLTMQELLDQQEQVFSKVKVGELTTGKITAVRNDEVQLGLDYGFDGIIPISELN 60 Query: 225 WKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGE-DPWVAIAKRYPEGTKLTGR 283 ++ ++ +I ++GDEIT + K ++ ++L QL + + + + K Y E +T Sbjct: 61 IEKNQYIEDIYHIGDEITAVITKVSQKDGTITLSKLQLDKRNDFAELQKAYDEHRIITVN 120 Query: 284 VTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRIS 343 V D G F + +S++D T SK V G +EV + ++D + R+ Sbjct: 121 VEKNIDKGVFAN-YNTYTFFIPISQLD-TKFITDTSKFV--GLNLEVYIKELDVRKNRLV 176 Query: 344 LGLKQCKANPWQQFAE-------------------------------------THNKGDR 366 + + E + G + Sbjct: 177 ASHRDVLQERINKEREERRAQIKAEKEAERARIKQEREEEKARIKAAKEDLFNSLEVGQK 236 Query: 367 VEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAER 426 +GK+ I +G F+ + GGI+GL H+++++W E +G E+ VL V+ E Sbjct: 237 RDGKVTKIMPYGAFVDI-GGIEGLAHINNLAWTRV-ESVEDVVSEGQEVEVYVLDVNKET 294 Query: 427 ERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRD 486 ++I+L +K + DP++ + +V KV + KGA V++ +GV+ YL SE S Sbjct: 295 KKIALALKDINNDPWDLIAKEVQIDDVVNAKVLRIIEKGAFVQIKEGVDAYLPISELSDT 354 Query: 487 RVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNA 546 RV T V+++GDEV+ K K + + +S++ E+D + +E S + Sbjct: 355 RVAKVTNVVNIGDEVKVKILDFKPKTKRMLVSIKEATREPEEDITEYLEVEE----SLGS 410 Query: 547 MAEAFKAA 554 + E FK Sbjct: 411 IGELFKDK 418 >UniRef50_Q7X2Y7 Putative 30S ribosomal protein S1 (Fragment) n=1 Tax=uncultured Acidobacteria bacterium RepID=Q7X2Y7_9BACT Length = 318 Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 97/241 (40%), Positives = 143/241 (59%), Gaps = 1/241 (0%) Query: 310 DWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEG 369 W+ + HPSK+VN GD VEV VL +D + RRISLG+KQ + NPWQ E + G RV G Sbjct: 1 SWSKRVKHPSKLVNPGDTVEVEVLSVDPKARRISLGMKQIQDNPWQTLHERYQVGTRVHG 60 Query: 370 KIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERI 429 +++++TDFG FI ++ G+DGLVH+SDISW+ + KKG EI AV+ +DAE R+ Sbjct: 61 RVRNLTDFGAFIEIEDGVDGLVHVSDISWSRRIKHPSEVLKKGQEIDAVITSIDAENRRL 120 Query: 430 SLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVE 489 SL +K L + ++ ++ +K G +V GK+ GA VEL D +EG SE S +RVE Sbjct: 121 SLSIKDLEPNAWDRFLTEHKPGDVVRGKIARFANFGAFVELDDNLEGLCHISELSDERVE 180 Query: 490 DATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAE 549 V+ +G E+E K +D +++ I LS R+ + DE V + + ++ E Sbjct: 181 KPEDVVQLGQEMEFKILRIDVESKKIGLSARSVGKDDEPIVDTKVYSSQAGS-GMASLGE 239 Query: 550 A 550 Sbjct: 240 L 240 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 91/217 (41%), Positives = 142/217 (65%), Gaps = 2/217 (0%) Query: 224 AW-KRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTG 282 +W KRVKHPS++VN GD + V+VL D + R+SLG+KQ+ ++PW + +RY GT++ G Sbjct: 1 SWSKRVKHPSKLVNPGDTVEVEVLSVDPKARRISLGMKQIQDNPWQTLHERYQVGTRVHG 60 Query: 283 RVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRI 342 RV NLTD+G F+EIE+GV+GLVHVS++ W+ + HPS+V+ G ++ ++ ID E RR+ Sbjct: 61 RVRNLTDFGAFIEIEDGVDGLVHVSDISWSRRIKHPSEVLKKGQEIDAVITSIDAENRRL 120 Query: 343 SLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAG 402 SL +K + N W +F H GD V GKI +FG F+ LD ++GL H+S++S Sbjct: 121 SLSIKDLEPNAWDRFLTEHKPGDVVRGKIARFANFGAFVELDDNLEGLCHISELSDERV- 179 Query: 403 EEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAED 439 E+ + G E+ +L++D E ++I L + + +D Sbjct: 180 EKPEDVVQLGQEMEFKILRIDVESKKIGLSARSVGKD 216 Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats. Identities = 53/243 (21%), Positives = 112/243 (46%), Gaps = 12/243 (4%) Query: 57 QGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKV 116 + GD V+V + +V+ L ++ + W TL + Y+ V G + Sbjct: 8 HPSKLVNPGDTVEVEVLSVDPKARRISLGMKQI-QDNPWQTLHERYQVGTRVHGRVRNLT 66 Query: 117 KGGFTVELN-GIRAFLPGSLVD-VRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRA 172 G +E+ G+ + S + R ++ + +G+E++ + +D + + +S + Sbjct: 67 DFGAFIEIEDGVDGLVHVSDISWSRRIKHPSEVLKKGQEIDAVITSIDAENRRLSLSIKD 126 Query: 173 VIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHP 231 + D+ L + G V+G + ++GAFV+L ++GL HI++++ +RV+ P Sbjct: 127 L----EPNAWDRFLTEHKPGDVVRGKIARFANFGAFVELDDNLEGLCHISELSDERVEKP 182 Query: 232 SEIVNVGDEITVKVLKFDRERTRVSLGLKQLGED--PWVAIAKRYPEGTKLTGRVTNLTD 289 ++V +G E+ K+L+ D E ++ L + +G+D P V + + L D Sbjct: 183 EDVVQLGQEMEFKILRIDVESKKIGLSARSVGKDDEPIVDTKVYSSQAGSGMASLGELAD 242 Query: 290 YGC 292 +G Sbjct: 243 FGL 245 Score = 47.6 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 30/79 (37%), Gaps = 3/79 (3%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQGELEIQVGDEVDVALD 73 E +PG +VRG + V+ E + + + E +Q+G E++ + Sbjct: 138 EHKPGDVVRGKIARFANFGAFVELDDNLEGLCHISELSDERVEKPEDVVQLGQEMEFKIL 197 Query: 74 AVEDGFGETLLSREKAKRH 92 ++ + LS + Sbjct: 198 RIDVESKKIGLSARSVGKD 216 >UniRef50_A5N6D1 30S ribosomal protein S1 n=2 Tax=Clostridium kluyveri RepID=A5N6D1_CLOK5 Length = 314 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 106/283 (37%), Positives = 172/283 (60%), Gaps = 1/283 (0%) Query: 90 KRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEG 149 W LE +++ + VI VKGG +L+G+RAF+P S + V+ D G Sbjct: 18 DMESVWSKLENEFKNEDIFEVVIKELVKGGLIADLHGLRAFIPASHISVKYTDDLKEFIG 77 Query: 150 KELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFV 209 K L+ K+I+LD+ +N +V+S + V + E +L + +G +++G V +T++G FV Sbjct: 78 KTLKVKLIQLDKSKNKIVLSGKEVEKLELEEMSKKLWSTISKGDKIEGRVSRITNFGVFV 137 Query: 210 DLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVA 269 DLGGV+GL+HI++++WK++K PSE+V+VGD++ V VL +++R R+SL +K+ PW Sbjct: 138 DLGGVEGLVHISELSWKKIKDPSEVVSVGDKLKVYVLNLNQDRNRISLSIKRTLNSPWEN 197 Query: 270 IAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVE 329 I K+Y + G V+ + + G F+EIE G+EGLVH+SE+ + P +V+ VGD V+ Sbjct: 198 IGKKYKSNDIVDGIVSKVINIGAFIEIEPGIEGLVHISEISQEHITT-PEEVLRVGDKVK 256 Query: 330 VMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIK 372 V +L+IDE+ RISL +K+ + F E D+ KI Sbjct: 257 VKILNIDEKASRISLSIKEAQDKFSPNFKEYKEYLDKDSDKIT 299 Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 78/296 (26%), Positives = 143/296 (48%), Gaps = 13/296 (4%) Query: 267 WVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGD 326 W + + + L G ++ G+ + S + K K +G Sbjct: 23 WSKLENEFKNEDIFEVVIKELVKGGLIADL-HGLRAFIPASHIS--VKYTDDLKEF-IGK 78 Query: 327 VVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHN----KGDRVEGKIKSITDFGIFIG 382 ++V ++ +D+ + +I L K+ + ++ ++ KGD++EG++ IT+FG+F+ Sbjct: 79 TLKVKLIQLDKSKNKIVLSGKEVEKLELEEMSKKLWSTISKGDKIEGRVSRITNFGVFVD 138 Query: 383 LDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFN 442 L GG++GLVH+S++SW ++ GD++ VL ++ +R RISL +K+ P+ Sbjct: 139 L-GGVEGLVHISELSWKKI-KDPSEVVSVGDKLKVYVLNLNQDRNRISLSIKRTLNSPWE 196 Query: 443 NWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVE 502 N K IV G V+ V GA +E+ G+EG + SE S++ + VL VGD+V+ Sbjct: 197 NIGKKYKSNDIVDGIVSKVINIGAFIEIEPGIEGLVHISEISQEHITTPEEVLRVGDKVK 256 Query: 503 AKFTGVDRKNRAISLSVRAKDEA---DEKDAIATVNKQEDANFSNNAMAEAFKAAK 555 K +D K ISLS++ + + K+ ++K D + + K K Sbjct: 257 VKILNIDEKASRISLSIKEAQDKFSPNFKEYKEYLDKDSDKITLGDLFKDKLKDMK 312 Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 79/268 (29%), Positives = 146/268 (54%), Gaps = 9/268 (3%) Query: 175 ESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEI 234 E++ + +L + + ++K L G DL G+ + + ++ K E Sbjct: 16 ETDMESVWSKLENEFKNEDIFEVVIKELVKGGLIADLHGLRAFIPASHISVKYTDDLKEF 75 Query: 235 VNVGDEITVKVLKFDRERTRVSLG----LKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDY 290 +G + VK+++ D+ + ++ L K E+ + +G K+ GRV+ +T++ Sbjct: 76 --IGKTLKVKLIQLDKSKNKIVLSGKEVEKLELEEMSKKLWSTISKGDKIEGRVSRITNF 133 Query: 291 GCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCK 350 G FV++ GVEGLVH+SE+ W K PS+VV+VGD ++V VL+++++R RISL +K+ Sbjct: 134 GVFVDLG-GVEGLVHISELSW-KKIKDPSEVVSVGDKLKVYVLNLNQDRNRISLSIKRTL 191 Query: 351 ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYK 410 +PW+ + + D V+G + + + G FI ++ GI+GLVH+S+IS + Sbjct: 192 NSPWENIGKKYKSNDIVDGIVSKVINIGAFIEIEPGIEGLVHISEISQEHITT-PEEVLR 250 Query: 411 KGDEIAAVVLQVDAERERISLGVKQLAE 438 GD++ +L +D + RISL +K+ + Sbjct: 251 VGDKVKVKILNIDEKASRISLSIKEAQD 278 Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 60/278 (21%), Positives = 133/278 (47%), Gaps = 12/278 (4%) Query: 15 EIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK-NAQGELEIQVGDEVDVALD 73 E E + I V+ + K ++ D + IPA +L+ +G + V L Sbjct: 27 ENEFKNEDIFEVVIKELVKGGLIADL-HGLRAFIPASHISVKYTDDLKEFIGKTLKVKLI 85 Query: 74 AVEDGFGETLLSREKAKRHEAWITLEKAYE---DAETVTGVINGKVKGGFTVELNGIRAF 130 ++ + +LS ++ ++ E +K + + + G ++ G V+L G+ Sbjct: 86 QLDKSKNKIVLSGKEVEKLELEEMSKKLWSTISKGDKIEGRVSRITNFGVFVDLGGVEGL 145 Query: 131 LPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLEN 188 + S + + ++D + G +L+ V+ L+Q RN + +S + + S + + + Sbjct: 146 VHISELSWKKIKDPSEVVSVGDKLKVYVLNLNQDRNRISLSIKRTLNS----PWENIGKK 201 Query: 189 LQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLK 247 + V GIV + + GAF+++ G++GL+HI++++ + + P E++ VGD++ VK+L Sbjct: 202 YKSNDIVDGIVSKVINIGAFIEIEPGIEGLVHISEISQEHITTPEEVLRVGDKVKVKILN 261 Query: 248 FDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVT 285 D + +R+SL +K+ + + K + ++T Sbjct: 262 IDEKASRISLSIKEAQDKFSPNFKEYKEYLDKDSDKIT 299 >UniRef50_Q0PQN6 30S ribosomal subunit protein S1 (Fragment) n=2 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=Q0PQN6_9GAMM Length = 283 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 147/182 (80%), Positives = 169/182 (92%), Gaps = 1/182 (0%) Query: 138 VRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKG 197 VRPVRDT +LEGK+LEFKVIKLD++RNNVVVSRRAV+E E SAER++LLENLQEG E+KG Sbjct: 62 VRPVRDTAYLEGKDLEFKVIKLDRRRNNVVVSRRAVVEQEYSAEREKLLENLQEGQELKG 121 Query: 198 IVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSL 257 +VKNLTDYGAFVDLGG+DGLLHITDMAWKRVKHPS++V +GDEITVKVLKFDRER RVSL Sbjct: 122 VVKNLTDYGAFVDLGGIDGLLHITDMAWKRVKHPSDVVQIGDEITVKVLKFDRERNRVSL 181 Query: 258 GLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIH 317 GLKQ+G+DPWVA+A+RYPE T+L G+VTN+ DYGCFVEIEEGVEGLVHVSEMD ++ H Sbjct: 182 GLKQMGDDPWVALARRYPESTRLFGKVTNIADYGCFVEIEEGVEGLVHVSEMDL-DQQEH 240 Query: 318 PS 319 PS Sbjct: 241 PS 242 Score = 164 bits (416), Expect = 8e-39, Method: Composition-based stats. Identities = 62/214 (28%), Positives = 109/214 (50%), Gaps = 8/214 (3%) Query: 311 WTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPW----QQFAETHNKGDR 366 W + + + + G +E V+ +D R + + + + ++ E +G Sbjct: 60 WIVRPVRDTAYLE-GKDLEFKVIKLDRRRNNVVVSRRAVVEQEYSAEREKLLENLQEGQE 118 Query: 367 VEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAER 426 ++G +K++TD+G F+ L GGIDGL+H++D++W + + GDEI VL+ D ER Sbjct: 119 LKGVVKNLTDYGAFVDL-GGIDGLLHITDMAWKRV-KHPSDVVQIGDEITVKVLKFDRER 176 Query: 427 ERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRD 486 R+SLG+KQ+ +DP+ + + GKVT + G VE+ +GVEG + SE D Sbjct: 177 NRVSLGLKQMGDDPWVALARRYPESTRLFGKVTNIADYGCFVEIEEGVEGLVHVSEMDLD 236 Query: 487 RVEDAT-LVLSVGDEVEAKFTGVDRKNRAISLSV 519 + E + S + + ++ A+SLSV Sbjct: 237 QQEHPSCPKWSPWVTRWRSWCWISTRSAAVSLSV 270 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 64/179 (35%), Positives = 105/179 (58%), Gaps = 6/179 (3%) Query: 237 VGDEITVKVLKFDRERTRVSLGLKQLGEDPW----VAIAKRYPEGTKLTGRVTNLTDYGC 292 G ++ KV+K DR R V + + + E + + + EG +L G V NLTDYG Sbjct: 72 EGKDLEFKVIKLDRRRNNVVVSRRAVVEQEYSAEREKLLENLQEGQELKGVVKNLTDYGA 131 Query: 293 FVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN 352 FV++ G++GL+H+++M W + HPS VV +GD + V VL D ER R+SLGLKQ + Sbjct: 132 FVDLG-GIDGLLHITDMAW-KRVKHPSDVVQIGDEITVKVLKFDRERNRVSLGLKQMGDD 189 Query: 353 PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKK 411 PW A + + R+ GK+ +I D+G F+ ++ G++GLVH+S++ + + ++ Sbjct: 190 PWVALARRYPESTRLFGKVTNIADYGCFVEIEEGVEGLVHVSEMDLDQQEHPSCPKWSP 248 Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 61/134 (45%), Gaps = 5/134 (3%) Query: 398 WNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPF----NNWVALNKKGAI 453 W + Y +G ++ V+++D R + + + + E + + ++G Sbjct: 59 WWIVRPVRDTAYLEGKDLEFKVIKLDRRRNNVVVSRRAVVEQEYSAEREKLLENLQEGQE 118 Query: 454 VTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNR 513 + G V + GA V+L G++G L ++ + RV+ + V+ +GDE+ K DR+ Sbjct: 119 LKGVVKNLTDYGAFVDLG-GIDGLLHITDMAWKRVKHPSDVVQIGDEITVKVLKFDRERN 177 Query: 514 AISLSVRAKDEADE 527 +SL ++ + Sbjct: 178 RVSLGLKQMGDDPW 191 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 42/180 (23%), Positives = 84/180 (46%), Gaps = 10/180 (5%) Query: 59 ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEA---WITLEKAYEDAETVTGVINGK 115 + G +++ + ++ ++SR E L + ++ + + GV+ Sbjct: 67 DTAYLEGKDLEFKVIKLDRRRNNVVVSRRAVVEQEYSAEREKLLENLQEGQELKGVVKNL 126 Query: 116 VKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLE--GKELEFKVIKLDQKRNNVVVSRRAV 173 G V+L GI L + + + V+ + G E+ KV+K D++RN V + + + Sbjct: 127 TDYGAFVDLGGIDGLLHITDMAWKRVKHPSDVVQIGDEITVKVLKFDRERNRVSLGLKQM 186 Query: 174 IESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPS 232 + A + E+ + G V N+ DYG FV++ GV+GL+H+++M + +HPS Sbjct: 187 GDDPWVALARRYPES----TRLFGKVTNIADYGCFVEIEEGVEGLVHVSEMDLDQQEHPS 242 Score = 68.1 bits (165), Expect = 9e-10, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 52/137 (37%), Gaps = 12/137 (8%) Query: 6 AQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQF---KNAQGELEI 62 +L E + G ++GVV + VD G + + + + Sbjct: 107 EKLLE------NLQEGQELKGVVKNLTDYGAFVDLGG-IDGLLHITDMAWKRVKHPSDVV 159 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 Q+GDE+ V + + L ++ + W+ L + Y ++ + G + G V Sbjct: 160 QIGDEITVKVLKFDRERNRVSLGLKQM-GDDPWVALARRYPESTRLFGKVTNIADYGCFV 218 Query: 123 EL-NGIRAFLPGSLVDV 138 E+ G+ + S +D+ Sbjct: 219 EIEEGVEGLVHVSEMDL 235 >UniRef50_P73530 30S ribosomal protein S1 homolog A n=61 Tax=cellular organisms RepID=RS1A_SYNY3 Length = 328 Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 80/267 (29%), Positives = 136/267 (50%), Gaps = 14/267 (5%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQGE 59 E FA L ++ + PG IV G V +++ L+D G K+ + IP ++ E Sbjct: 15 EDFAALLDKY--DYHFSPGDIVAGTVFSMESRGALIDIGAKTAAYIPIQEMSINRVDDPE 72 Query: 60 LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGG 119 +Q + + + E+ G+ LS + + AW + + + TV + +GG Sbjct: 73 EVLQPNETREFFILTDENEDGQLTLSIRRIEYMRAWERVRQLQAEDATVRSNVFATNRGG 132 Query: 120 FTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 V + G+R F+PGS + R ++ L G++L K +++D++RN +V+S R + Sbjct: 133 ALVRIEGLRGFIPGSHISAREAKE--DLVGEDLPLKFLEVDEERNRLVLSHRRALVERK- 189 Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGD 239 + L+ V G V+ + YGAF+D+GGV GLLHI++++ + P + NV D Sbjct: 190 ------MNGLEVAQVVVGSVRGIKPYGAFIDIGGVSGLLHISEISHDHIDTPHSVFNVND 243 Query: 240 EITVKVLKFDRERTRVSLGLKQLGEDP 266 EI V ++ D ER R+SL KQL +P Sbjct: 244 EIKVMIIDLDAERGRISLSTKQLEPEP 270 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 61/289 (21%), Positives = 123/289 (42%), Gaps = 16/289 (5%) Query: 268 VAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDV 327 + G + G V ++ G ++I + + EM N+ P +V+ + Sbjct: 22 DKYDYHFSPGDIVAGTVFSMESRGALIDIGAKTAAYIPIQEMS-INRVDDPEEVLQPNET 80 Query: 328 VEVMVLDIDEERRRISLGLKQCK-ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGG 386 E +L + E +++L +++ + W++ + + V + + G + ++ G Sbjct: 81 REFFILTDENEDGQLTLSIRRIEYMRAWERVRQLQAEDATVRSNVFATNRGGALVRIE-G 139 Query: 387 IDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVA 446 + G + S IS A E+ G+++ L+VD ER R+ L ++ + Sbjct: 140 LRGFIPGSHISAREAKEDL-----VGEDLPLKFLEVDEERNRLVLSHRRAL---VERKMN 191 Query: 447 LNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFT 506 + +V G V + GA +++ GV G L SE S D ++ V +V DE++ Sbjct: 192 GLEVAQVVVGSVRGIKPYGAFIDIG-GVSGLLHISEISHDHIDTPHSVFNVNDEIKVMII 250 Query: 507 GVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAAK 555 +D + ISLS + E + A + ++ N + MAE F+ + Sbjct: 251 DLDAERGRISLSTKQL----EPEPGAMLKDRDLVNEMADEMAEIFRQKR 295 >UniRef50_C1G573 rRNA biogenesis protein RRP5 n=4 Tax=Onygenales RepID=C1G573_PARBD Length = 1780 Score = 237 bits (605), Expect = 7e-61, Method: Composition-based stats. Identities = 120/599 (20%), Positives = 240/599 (40%), Gaps = 68/599 (11%) Query: 14 KEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQGELEIQVGDEVDV 70 K + + GS V G V I D + V+ +P + A+ + + + Sbjct: 796 KFEDFQEGSKVTGFVKNIIADGLFVEFLRGLTGFLPKRLMDDDHVAKPDFGYTLSQTISS 855 Query: 71 ALDAVEDGFGETLLSRE--KAKRHEAWITLEKAYEDAE----TVTGVIN-------GKVK 117 + ++ED LS + + + A + V G I G++ Sbjct: 856 FVHSIEDDRQRFTLSMKENQTSKQRVSDNARPASNANQASINPVDGDIKSFDDLTFGRIT 915 Query: 118 GGFTVEL----------NGIRAFLPGSLV-----DVRPVRDTLHL--EGKELEFKVIKLD 160 V + + I+ + S + ++ + L + + ++I + Sbjct: 916 KAKIVSVKETQINVQLADNIQGRIDVSEIFDGWDAIKDRKQPLRYFKPKQIIPVRIIGIH 975 Query: 161 --QKRNNVVVSRRA----VIESENSAERDQL-------LENLQEGMEVKGIVKNLTDYGA 207 + + +S R+ V E + L+ ++ G G V N+ D Sbjct: 976 DARSHKFLPISHRSGKYPVFELSAKPSSLESKDIELLSLDKVEIGSSWLGFVNNIGDDCL 1035 Query: 208 FVDL-GGVDGLLHITDMAWKR--VKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGE 264 ++++ V G L ITD++ V ++ VG I V V + ++ R+ L K Sbjct: 1036 WINITPNVRGRLRITDVSDDLSLVGDVTKNFPVGSAIKVHVTGVNVDKNRLDLSAKH--G 1093 Query: 265 DPW-VAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVN 323 DP + +G L GRVT ++D V++ + G +++ +M + P+ + Sbjct: 1094 DPLNKRTISDFSKGEILLGRVTKVSDRQVLVQLSDTTVGAINLIDMADDYTKVIPAN-FH 1152 Query: 324 VGDVVEVMVLDIDEERRRISLGLKQCK--------ANPWQQFAETHNKGDRVEGKIKSIT 375 +V+ V +LD+D ++I L ++ + +P + D V G ++ + Sbjct: 1153 KNEVLRVCILDVDVPNKKILLSVRPSRVLSSSLPIEDPEIKSISQLKVNDIVRGFVRRVA 1212 Query: 376 DFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQ 435 + G+F+ L + V +SD+S + ++ E++ + ++ VDAE ++ + +K+ Sbjct: 1213 NNGLFVTLGHEVTAYVRISDLSDSYL-KDWQSEFQVDQLVHGRIIFVDAEANKLQMSLKE 1271 Query: 436 LAEDPFNNW---VALNKKGAIVTGKVTAVDAKGATVELAD--GVEGYLRASEASRDRVED 490 +P + +G IVTGKV +V+ GA + + + G +E + +VED Sbjct: 1272 SVLEPNYKAPITIRDLNRGQIVTGKVRSVEEFGAFIVIDGTANLSGLCHRTEMAEQKVED 1331 Query: 491 ATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAE 549 A + GD V+AK +D ISL ++A + D N ED N + + +E Sbjct: 1332 ARKLFEKGDIVKAKILKIDHDKERISLGLKASYFKESDDKSDGENS-EDGNEQSVSESE 1389 Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats. Identities = 108/587 (18%), Positives = 220/587 (37%), Gaps = 74/587 (12%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDA-GLKSESAIPAEQFKNAQGEL 60 TE++ FE +PG +V V K+V+L+ G + + AE + Q Sbjct: 694 TETYKNAFE------NIQPGDLVSCTVFEKSKEVILLRLEGSGLVARLNAEHVTDGQSSK 747 Query: 61 E------IQVGDEV-DVALDAVEDGFGETLLSREKAKRHEAWITLEKA----YEDAETVT 109 I+VG ++ D+ + +++ +S + + + A +++ VT Sbjct: 748 HGSALACIRVGQKLHDLVILSMQKVHRLIKVSNKPSLKQARQRGELPAKFEDFQEGSKVT 807 Query: 110 GVINGKVKGGFTVEL-NGIRAFLPGSLVDVRPV--RDTLHLEGKELEFKVIKLDQKRNNV 166 G + + G VE G+ FLP L+D V D + + + V ++ R Sbjct: 808 GFVKNIIADGLFVEFLRGLTGFLPKRLMDDDHVAKPDFGYTLSQTISSFVHSIEDDRQRF 867 Query: 167 VVSRRAVIESENSAERD-------------------QLLENLQEGMEVKGIVKNLTDYGA 207 +S + S+ + + ++L G K + ++ + Sbjct: 868 TLSMKENQTSKQRVSDNARPASNANQASINPVDGDIKSFDDLTFGRITKAKIVSVKETQI 927 Query: 208 FVDL-GGVDGLLHITDMAWKRV-----KHPSEIVNVGDEITVKVLKFDRERTR----VS- 256 V L + G + ++++ K P I V+++ R+ +S Sbjct: 928 NVQLADNIQGRIDVSEIFDGWDAIKDRKQPLRYFKPKQIIPVRIIGIHDARSHKFLPISH 987 Query: 257 ---------LGLKQ---LGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLV 304 L K +D + + G+ G V N+ D ++ I V G + Sbjct: 988 RSGKYPVFELSAKPSSLESKDIELLSLDKVEIGSSWLGFVNNIGDDCLWINITPNVRGRL 1047 Query: 305 HVSEMDWTNKNI-HPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNK 363 ++++ + +K VG ++V V ++ ++ R+ L K ++ +K Sbjct: 1048 RITDVSDDLSLVGDVTKNFPVGSAIKVHVTGVNVDKNRLDLSAKHGDPL-NKRTISDFSK 1106 Query: 364 GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVD 423 G+ + G++ ++D + + L G ++L D++ + + K + + +L VD Sbjct: 1107 GEILLGRVTKVSDRQVLVQLSDTTVGAINLIDMADDYTKVIPA-NFHKNEVLRVCILDVD 1165 Query: 424 AERERISLGVKQLA--------EDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVE 475 ++I L V+ EDP ++ K IV G V V G V L V Sbjct: 1166 VPNKKILLSVRPSRVLSSSLPIEDPEIKSISQLKVNDIVRGFVRRVANNGLFVTLGHEVT 1225 Query: 476 GYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAK 522 Y+R S+ S ++D V V + VD + + +S++ Sbjct: 1226 AYVRISDLSDSYLKDWQSEFQVDQLVHGRIIFVDAEANKLQMSLKES 1272 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 115/658 (17%), Positives = 227/658 (34%), Gaps = 121/658 (18%) Query: 13 LKEIETRPGSIVRGVVVAI-----DKDVVLVDAGLKSESAIPAEQFKNAQ---GELEIQV 64 L+ + G++V+G + + D ++V +P + + E + + Sbjct: 552 LRLEDVTVGAVVKGKIEKLLTGPDGIDGLIVSLADGISGLVPRMHLSDTKLQHPERKFRE 611 Query: 65 GDEVDVALDAVEDGFGETLLSREKA---KRHEAW-------------------------- 95 G +V + +V + L+ +K+ AW Sbjct: 612 GTQVSARILSVNLEKRQLRLTLKKSLLNSESPAWKEYSDILPGNQSPGTIISIHPHGAIV 671 Query: 96 -----------------------ITLEKAYED---AETVTGVINGKVKGGFTVELNG--I 127 T + A+E+ + V+ + K K + L G + Sbjct: 672 QFYGEVREVRKLVVSCKDPSTSTETYKNAFENIQPGDLVSCTVFEKSKEVILLRLEGSGL 731 Query: 128 RAFLPGSLV-DVRPVRDTLHL----EGKEL-EFKVIKLDQKRNNVVVSRRAVIESENSA- 180 A L V D + + L G++L + ++ + + + VS + ++ Sbjct: 732 VARLNAEHVTDGQSSKHGSALACIRVGQKLHDLVILSMQKVHRLIKVSNKPSLKQARQRG 791 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVD-LGGVDGLLHITDMAWKRVKHPSEIVNVGD 239 E E+ QEG +V G VKN+ G FV+ L G+ G L M V P + Sbjct: 792 ELPAKFEDFQEGSKVTGFVKNIIADGLFVEFLRGLTGFLPKRLMDDDHVAKPDFGYTLSQ 851 Query: 240 EITVKVLKFDRERTRVSLGLK--------------------QLGEDPWVAIAKRYPE--- 276 I+ V + +R R +L +K Q +P K + + Sbjct: 852 TISSFVHSIEDDRQRFTLSMKENQTSKQRVSDNARPASNANQASINPVDGDIKSFDDLTF 911 Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEM----DWTNKNIHPSKVVNVGDVVEVMV 332 G ++ ++ + V++ + ++G + VSE+ D P + ++ V + Sbjct: 912 GRITKAKIVSVKETQINVQLADNIQGRIDVSEIFDGWDAIKDRKQPLRYFKPKQIIPVRI 971 Query: 333 LDIDEERRR--------------ISLGLKQCKANPWQQFA---ETHNKGDRVEGKIKSIT 375 + I + R L K + G G + +I Sbjct: 972 IGIHDARSHKFLPISHRSGKYPVFELSAKPSSLESKDIELLSLDKVEIGSSWLGFVNNIG 1031 Query: 376 DFGIFIGLDGGIDGLVHLSDISWNVA-GEEAVREYKKGDEIAAVVLQVDAERERISLGVK 434 D ++I + + G + ++D+S +++ + + + G I V V+ ++ R+ L K Sbjct: 1032 DDCLWINITPNVRGRLRITDVSDDLSLVGDVTKNFPVGSAIKVHVTGVNVDKNRLDLSAK 1091 Query: 435 QLAEDPFNN-WVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATL 493 DP N ++ KG I+ G+VT V + V+L+D G + + + D + Sbjct: 1092 H--GDPLNKRTISDFSKGEILLGRVTKVSDRQVLVQLSDTTVGAINLIDMADDYTKVIPA 1149 Query: 494 VLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAF 551 + + VD N+ I LSVR I + + N + F Sbjct: 1150 NFHKNEVLRVCILDVDVPNKKILLSVRPSRVLSSSLPIEDPEIKSISQLKVNDIVRGF 1207 Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats. Identities = 97/637 (15%), Positives = 209/637 (32%), Gaps = 98/637 (15%) Query: 13 LKEIETRPGSIVRGVVVAIDKDVVLVDAG---LKSESAIPAEQFKNAQGELEIQVGDEVD 69 L + + + V+ VV+++ +++D G +++ + +++ +I+ G Sbjct: 271 LSKSDMVVNTTVQASVVSVEDHGLVMDLGLDDGQTKGFMSSKEIPPDLEVSQIKEGSVFL 330 Query: 70 VALDAVEDGFGETLLS--REKAKRHEAWITLEKAYEDAETVTGV-----INGKVKGGFTV 122 + LS A + L A + G +N G Sbjct: 331 CVVTGHNANGSVVKLSANLPAAGSIKKSHYLTSAPTINSFLPGTAAEILLNEVTSTGMAG 390 Query: 123 ELNG-IRAFLPGSLVDVRPVRD---TLHLEGKELEFKVI----KLDQKRNNVVVSRRAVI 174 ++ G + A + + T + G +++ ++I ++ + + V Sbjct: 391 KIMGMLDAVVDLVQSGSTTGTENLTTKYHVGAKIKGRLICTFPTVEPSKLGFSILEHVVK 450 Query: 175 ESENSAERDQLLENLQ-EGMEV-KGIVKNLTD-YGAFVDLGGV-DGLLHITDMAWKRVKH 230 S E+ E++ V + V + G +V G +HI+ ++ +V Sbjct: 451 FSPTVLEQYSTSEDIPAVSAIVPEAKVTKVEPGLGVYVQFNNKHYGFVHISRLSDDKVDS 510 Query: 231 PSEI---VNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNL 287 S V +++ F L ++ D + G + G++ L Sbjct: 511 ISATQGPYKVDSTHEARIVGFSALDNLYLLSFERKVIDQPFLRLEDVTVGAVVKGKIEKL 570 Query: 288 TDY-----GCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRI 342 G V + +G+ GLV + T K HP + G V +L ++ E+R++ Sbjct: 571 LTGPDGIDGLIVSLADGISGLVPRMHLSDT-KLQHPERKFREGTQVSARILSVNLEKRQL 629 Query: 343 SLGLKQCKANPWQQFAETHN---KGDRVEGKIKSITDFGIFIGLDGGID----------- 388 L LK+ N + ++ G++ G I SI G + G + Sbjct: 630 RLTLKKSLLNSESPAWKEYSDILPGNQSPGTIISIHPHGAIVQFYGEVREVRKLVVSCKD 689 Query: 389 ----------------------------------------GLV------HLSDISWNVAG 402 GLV H++D + Sbjct: 690 PSTSTETYKNAFENIQPGDLVSCTVFEKSKEVILLRLEGSGLVARLNAEHVTD-GQSSKH 748 Query: 403 EEAVREYKKGDEIAAVVLQVDAERERI-----SLGVKQLAE-DPFNNWVALNKKGAIVTG 456 A+ + G ++ +V+ + R+ +KQ + ++G+ VTG Sbjct: 749 GSALACIRVGQKLHDLVILSMQKVHRLIKVSNKPSLKQARQRGELPAKFEDFQEGSKVTG 808 Query: 457 KVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAIS 516 V + A G VE G+ G+L D V ++ + + ++ + + Sbjct: 809 FVKNIIADGLFVEFLRGLTGFLPKRLMDDDHVAKPDFGYTLSQTISSFVHSIEDDRQRFT 868 Query: 517 LSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKA 553 LS++ + ++ + S N + K+ Sbjct: 869 LSMKENQTSKQRVSDNARPASNANQASINPVDGDIKS 905 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 77/386 (19%), Positives = 144/386 (37%), Gaps = 21/386 (5%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA-----QGELEIQVG 65 E L + GS G V I D + ++ + + VG Sbjct: 1010 ELLSLDKVEIGSSWLGFVNNIGDDCLWINITPNVRGRLRITDVSDDLSLVGDVTKNFPVG 1069 Query: 66 DEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN 125 + V + V LS + + E + G + V+L+ Sbjct: 1070 SAIKVHVTGVNVDKNRLDLSAKHGDPLN--KRTISDFSKGEILLGRVTKVSDRQVLVQLS 1127 Query: 126 G--IRAFLPGSLVDVR-PVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 + A + D V + + L ++ +D +++S R +S Sbjct: 1128 DTTVGAINLIDMADDYTKVIPANFHKNEVLRVCILDVDVPNKKILLSVRPSRVLSSSLPI 1187 Query: 183 D----QLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNV 237 + + + L+ V+G V+ + + G FV LG V + I+D++ +K V Sbjct: 1188 EDPEIKSISQLKVNDIVRGFVRRVANNGLFVTLGHEVTAYVRISDLSDSYLKDWQSEFQV 1247 Query: 238 GDEITVKVLKFDRERTRVSLGLKQLGEDPWVAI---AKRYPEGTKLTGRVTNLTDYGCFV 294 + +++ D E ++ + LK+ +P + G +TG+V ++ ++G F+ Sbjct: 1248 DQLVHGRIIFVDAEANKLQMSLKESVLEPNYKAPITIRDLNRGQIVTGKVRSVEEFGAFI 1307 Query: 295 EIEE--GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN 352 I+ + GL H +EM K K+ GD+V+ +L ID ++ RISLGLK Sbjct: 1308 VIDGTANLSGLCHRTEMA-EQKVEDARKLFEKGDIVKAKILKIDHDKERISLGLKASYFK 1366 Query: 353 PWQQFAETHNKGDRVEGKIKSITDFG 378 ++ N D E + D G Sbjct: 1367 ESDDKSDGENSEDGNEQSVSESEDGG 1392 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 71/432 (16%), Positives = 151/432 (34%), Gaps = 34/432 (7%) Query: 148 EGKELEFKVIKLDQKRNNVVVSRRAVIE---SENSAERDQLLENLQEGMEVKGIVKNLTD 204 G+ L V + + N + I+ A ++ V+ V ++ D Sbjct: 232 LGQYLRASVTATESETKNPQTKGKKHIQLSVDPRDANSGLSKSDMVVNTTVQASVVSVED 291 Query: 205 YGAFVDLGGVDGLLHITDMAWKRVKHPSEI--VNVGDEITVKVLKFDRERTRVSLG---- 258 +G +DLG DG M+ K + E+ + G V + + V L Sbjct: 292 HGLVMDLGLDDGQ-TKGFMSSKEIPPDLEVSQIKEGSVFLCVVTGHNANGSVVKLSANLP 350 Query: 259 ----LKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNK 314 +K+ + GT + +T G +I ++ +V + + T Sbjct: 351 AAGSIKKSHYLTSAPTINSFLPGTAAEILLNEVTSTGMAGKIMGMLDAVVDLVQSGSTTG 410 Query: 315 NIHPSKVVNVGDVVEVMVLDIDE--ERRRISLGLKQCKANPWQQFAETHNKGDRVEG--- 369 + + +VG ++ ++ E ++ + + E ++ + + Sbjct: 411 TENLTTKYHVGAKIKGRLICTFPTVEPSKLGFSILEHVVKFSPTVLEQYSTSEDIPAVSA 470 Query: 370 -----KIKSITDF-GIFIGLDGGIDGLVHLSDISWNVAGEEAVRE--YKKGDEIAAVVLQ 421 K+ + G+++ + G VH+S +S + + + YK A ++ Sbjct: 471 IVPEAKVTKVEPGLGVYVQFNNKHYGFVHISRLSDDKVDSISATQGPYKVDSTHEARIVG 530 Query: 422 VDAERERISLGV-KQLAEDPFNNWVALNKKGAIVTGKVTAVDAK-----GATVELADGVE 475 A L +++ + PF + GA+V GK+ + G V LADG+ Sbjct: 531 FSALDNLYLLSFERKVIDQPFLR-LEDVTVGAVVKGKIEKLLTGPDGIDGLIVSLADGIS 589 Query: 476 GYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVN 535 G + S +++ G +V A+ V+ + R + L+++ E A + Sbjct: 590 GLVPRMHLSDTKLQHPERKFREGTQVSARILSVNLEKRQLRLTLKKSLLNSESPAWKEYS 649 Query: 536 KQEDANFSNNAM 547 N S + Sbjct: 650 DILPGNQSPGTI 661 >UniRef50_UPI000194C80A PREDICTED: programmed cell death 11 n=2 Tax=Taeniopygia guttata RepID=UPI000194C80A Length = 1885 Score = 237 bits (605), Expect = 9e-61, Method: Composition-based stats. Identities = 112/566 (19%), Positives = 213/566 (37%), Gaps = 43/566 (7%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVE 76 PG +V+ V + + V + + + + V + +V Sbjct: 330 NLLPGLVVKARVQKVFPLGMKVTFLSYFTGIVDFMH-TDPEKSMSYSPDQVVKACVLSVH 388 Query: 77 DGFGETLLSREK--AKRHEAWITLEKAYEDAETVTGVINGKVKG-GFTVELN-GIRAFL- 131 L+ A L A + K G EL+ G AF Sbjct: 389 PTSRAVRLTLRPPFLHAGGAPRQLPAQRMGAVVEEATVKAFYKQFGAIFELDDGTLAFAR 448 Query: 132 PGSLVDVRPVRDTLHLE-GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQ 190 L R + G + + ++I +VS ++ + R +++ Sbjct: 449 LKHLSKTRKSFKPGAFQEGCKHKCRIIAYSLMDEMCIVS----LKHQIIEARFLQYQDIH 504 Query: 191 EGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFD 249 G V+G V +L G V + G+ GL+ ++ +K P + N+GDE+ +VL+ + Sbjct: 505 TGDVVQGKVLSLKPIGMQVKVADGIRGLVPSLHLSDVILKQPEKKYNIGDEVKCRVLECN 564 Query: 250 RERTRVSLGLKQLGED---PWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHV 306 E ++ L LK+ P ++ + G G V ++GC V+ V+GLV Sbjct: 565 PEGKKLILTLKKSLVQSKLPVLSNYEDAKPGLITHGFVVCAREFGCIVKFYNDVKGLVPK 624 Query: 307 SEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC---------KANPWQQF 357 +E+ + P KV G V++VMVL + ++ R+ L + K P ++ Sbjct: 625 NEL-GSEPISCPDKVFYEGQVLKVMVLKCEPQQERLLLSFRLSSKPGPEDKWKCTPKEKQ 683 Query: 358 AETHNKGDRVEGKIKSITDFGIFIGL---DGGIDGLVHLSDISWNVAGEEAVREYKKGDE 414 + G+ V+ +I D G+ + + + + + + +S V + + + + Sbjct: 684 EVKYQIGEIVDVRILKKKDNGLEVSILEDEDNVVAWIPMLHLSDFVDISKLLWHCLREGD 743 Query: 415 IAAVVLQVDAERERISLGVK-----QLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVE 469 + VL + A+ E + L K + E+ + + G ++TG V V G VE Sbjct: 744 VLPRVLYLSAKGEHLILSRKSAVISAVQEEKVVRNFSEIQPGMLLTGYVRNVMPFGVFVE 803 Query: 470 LADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKD 529 GV G S V D VG V AK D + + + L+++ Sbjct: 804 FPFGVTGLAPKVSMSDKFVTDTKDHFVVGQTVIAKVMSTDEEKQRVLLNLK--------- 854 Query: 530 AIATVNKQEDANFSNNAMAEAFKAAK 555 ++ + + A+ S + + + FK K Sbjct: 855 -VSECSSGDSASESFDLLNQYFKELK 879 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 97/576 (16%), Positives = 199/576 (34%), Gaps = 58/576 (10%) Query: 18 TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE---------------- 61 G ++ G + + + + +P Q +A +L Sbjct: 133 LSEGMLLLGCIKEVSDYELAISLPNGLSGFVPVTQISDAYSKLLTKQVAQGEVPEELNSL 192 Query: 62 ---IQVGDEVDVALDAVE---DGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGK 115 G V + +VE DG LS + K ++ A ++G + Sbjct: 193 PDIFSPGTLVRCIVTSVEKSDDGRRSVKLSIDPEKVNKGLN--SAALTAGMVLSGSVLSV 250 Query: 116 VKGGFTVELN--GIRAFLPGSLVDVRPVRDTLH----LEGKELEFKVIKLDQKRN--NVV 167 G+ +++ G AFLP ++ G+ L ++++ + ++ Sbjct: 251 EDHGYLIDIGIAGTHAFLP-HQKAKNYIKAVKKGPDLKIGQNLNCLIVEVKNEGRVVSLS 309 Query: 168 VSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVD----LGGVDGLLHITDM 223 + R V S + ++ L NL G+ VK V+ + G V G+ +H Sbjct: 310 IDRSEVAASIATERQNWTLSNLLPGLVVKARVQKVFPLGMKVTFLSYFTGIVDFMH---- 365 Query: 224 AWKRVKHPSE--IVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGT--- 278 P + + + VL V L L+ A + + Sbjct: 366 -----TDPEKSMSYSPDQVVKACVLSVHPTSRAVRLTLRPPFLHAGGAPRQLPAQRMGAV 420 Query: 279 KLTGRVTNLTD-YGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDE 337 V +G E+++G + + T K+ P G + ++ Sbjct: 421 VEEATVKAFYKQFGAIFELDDGTLAFARLKHLSKTRKSFKPG-AFQEGCKHKCRIIAYSL 479 Query: 338 ERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDIS 397 + LK + + GD V+GK+ S+ G+ + + GI GLV +S Sbjct: 480 MDEMCIVSLKHQIIEARFLQYQDIHTGDVVQGKVLSLKPIGMQVKVADGIRGLVPSLHLS 539 Query: 398 WNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQL---AEDPFNNWVALNKKGAIV 454 +V ++ ++Y GDE+ VL+ + E +++ L +K+ ++ P + K G I Sbjct: 540 -DVILKQPEKKYNIGDEVKCRVLECNPEGKKLILTLKKSLVQSKLPVLSNYEDAKPGLIT 598 Query: 455 TGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRA 514 G V G V+ + V+G + +E + + V G ++ + + Sbjct: 599 HGFVVCAREFGCIVKFYNDVKGLVPKNELGSEPISCPDKVFYEGQVLKVMVLKCEPQQER 658 Query: 515 ISLSVRAKDE-ADEKDAIATVNKQEDANFSNNAMAE 549 + LS R + E T ++++ + + + Sbjct: 659 LLLSFRLSSKPGPEDKWKCTPKEKQEVKYQIGEIVD 694 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 96/560 (17%), Positives = 202/560 (36%), Gaps = 44/560 (7%) Query: 13 LKEIETRPGSIVRGVVVAIDKDVVLVDAG-LKSESAIPAEQFKN----AQGELEIQVGDE 67 L G ++ G V++++ L+D G + + +P ++ KN + ++++G Sbjct: 232 LNSAALTAGMVLSGSVLSVEDHGYLIDIGIAGTHAFLPHQKAKNYIKAVKKGPDLKIGQN 291 Query: 68 VDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYED-----AETVTGVINGKVKGGFTV 122 ++ + V++ LS ++++ + T + + V + G V Sbjct: 292 LNCLIVEVKNEGRVVSLSIDRSEVAASIATERQNWTLSNLLPGLVVKARVQKVFPLGMKV 351 Query: 123 ----ELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 GI F+ P + + + ++ V+ + V ++ R Sbjct: 352 TFLSYFTGIVDFM-----HTDPEKSMSYSPDQVVKACVLSVHPTSRAVRLTLRPPFLHAG 406 Query: 179 SAERDQLLENLQEGMEV-KGIVKNL-TDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIV 235 A R + + G V + VK +GA +L G + ++ R Sbjct: 407 GAPRQLPAQRM--GAVVEEATVKAFYKQFGAIFELDDGTLAFARLKHLSKTRKSFKPGAF 464 Query: 236 NVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVE 295 G + +++ + + LK + + G + G+V +L G V+ Sbjct: 465 QEGCKHKCRIIAYSLMDEMCIVSLKHQIIEARFLQYQDIHTGDVVQGKVLSLKPIGMQVK 524 Query: 296 IEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN--- 352 + +G+ GLV + P K N+GD V+ VL+ + E +++ L LK+ Sbjct: 525 VADGIRGLVPSLHLS-DVILKQPEKKYNIGDEVKCRVLECNPEGKKLILTLKKSLVQSKL 583 Query: 353 PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKG 412 P E G G + +FG + + GLV +++ + + +G Sbjct: 584 PVLSNYEDAKPGLITHGFVVCAREFGCIVKFYNDVKGLVPKNELGSEPISC-PDKVFYEG 642 Query: 413 DEIAAVVLQVDAERERI----SLGVKQLAEDPF-----NNWVALNKKGAIVTGKVTAVDA 463 + +VL+ + ++ER+ L K ED + + G IV ++ Sbjct: 643 QVLKVMVLKCEPQQERLLLSFRLSSKPGPEDKWKCTPKEKQEVKYQIGEIVDVRILKKKD 702 Query: 464 KGATVEL---ADGVEGYLRASEASR--DRVEDATLVLSVGDEVEAKFTGVDRKNRAISLS 518 G V + D V ++ S D + L GD + + + K + LS Sbjct: 703 NGLEVSILEDEDNVVAWIPMLHLSDFVDISKLLWHCLREGDVLP-RVLYLSAKGEHLILS 761 Query: 519 VRAKDEADEKDAIATVNKQE 538 ++ + ++ N E Sbjct: 762 RKSAVISAVQEEKVVRNFSE 781 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 118/601 (19%), Positives = 218/601 (36%), Gaps = 84/601 (13%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQV---GDEVDVALD 73 + +PG I G VV + +V + +P + + +V G + V + Sbjct: 591 DAKPGLITHGFVVCAREFGCIVKFYNDVKGLVPKNELGSEPISCPDKVFYEGQVLKVMVL 650 Query: 74 AVEDGFGETLLSRE---KAKRHEAW-----ITLEKAYEDAETVTGVINGKVKGGFTVEL- 124 E LLS K + W E Y+ E V I K G V + Sbjct: 651 KCEPQQERLLLSFRLSSKPGPEDKWKCTPKEKQEVKYQIGEIVDVRILKKKDNGLEVSIL 710 Query: 125 ---NGIRAFLPGSLVDVRPVRDTLHLE------GKELEFKVIKLDQKRNNVVVSRR-AVI 174 + + A++P ++ + D L G L +V+ L K ++++SR+ AVI Sbjct: 711 EDEDNVVAWIP--MLHLSDFVDISKLLWHCLREGDVLP-RVLYLSAKGEHLILSRKSAVI 767 Query: 175 ESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSE 233 + + + +Q GM + G V+N+ +G FV+ GV GL M+ K V + Sbjct: 768 SAVQEEKVVRNFSEIQPGMLLTGYVRNVMPFGVFVEFPFGVTGLAPKVSMSDKFVTDTKD 827 Query: 234 IVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTD---Y 290 VG + KV+ D E+ RV L LK + ++ + + + + D Sbjct: 828 HFVVGQTVIAKVMSTDEEKQRVLLNLKVSECSSGDSASESFDLLNQYFKELKEIRDLLRR 887 Query: 291 G--CFVEIEEGVEGLV----------------HVSEMDWTNKNIHPSKV-VNVGDVVEVM 331 G E+ G + V+ + T H + G+ +V+ Sbjct: 888 GEPSICELVPGKRVHLVVQDVREDGSALFSGSPVTGLTVTATRYHLGDKNIAPGEKRKVL 947 Query: 332 VLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIG-LDGGIDGL 390 VL +D + + L++ Q+ + + ++ IT+ L+ G Sbjct: 948 VLHVDALTSEVYVSLREELLK--QRPKRRLRENSQHSVVVQHITEHFAIASLLETGQLAA 1005 Query: 391 VHLSDISWNVAGEEAVREYKKGDEIAAVVLQVD------------AERERISLGVKQLAE 438 V ++ +N + + G +I+A + V ++ + + V+ +E Sbjct: 1006 VPIA-CHFNDTFRFDSEKLRVGQKISATLKAVKENNHGVLLAVQGPAKKNVFVRVRNESE 1064 Query: 439 DPFNNWVALNK----KGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRD--RVEDAT 492 + K G +VTG V +V TV + D + G + AS + T Sbjct: 1065 TALEEVLPAVKHSLSPGDVVTGTVKSVKPTHVTVAIDDKLTGSIHASRILDEVPIGSFPT 1124 Query: 493 LVLSVGDEVEAKFTGV-DRKNRA---IS----------LSVRAKDEADEKDAIATVNKQE 538 L G +V A+ G D I+ LS+R ++ E A+ + ++ Sbjct: 1125 STLQAGQKVTARVIGGRDVNTHRCLPITHPHFTQSIPELSIRPSEQEGEFTAMLNLKEES 1184 Query: 539 D 539 Sbjct: 1185 S 1185 Score = 167 bits (424), Expect = 7e-40, Method: Composition-based stats. Identities = 106/564 (18%), Positives = 201/564 (35%), Gaps = 57/564 (10%) Query: 13 LKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA---QGELEIQVGDEVD 69 L+ + G +V+G V+++ + V +P+ + Q E + +GDEV Sbjct: 498 LQYQDIHTGDVVQGKVLSLKPIGMQVKVADGIRGLVPSLHLSDVILKQPEKKYNIGDEVK 557 Query: 70 VALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAET---VTGVINGKVKGGFTVEL-N 125 + + +L+ +K+ L YEDA+ G + + G V+ N Sbjct: 558 CRVLECNPEGKKLILTLKKSLVQSKLPVLSN-YEDAKPGLITHGFVVCAREFGCIVKFYN 616 Query: 126 GIRAFLPGSLVDVRPV--RDTLHLEGKELEFKVIKLDQKRNNVVVSRRAV-----IESEN 178 ++ +P + + P+ D + EG+ L+ V+K + ++ +++S R + Sbjct: 617 DVKGLVPKNELGSEPISCPDKVFYEGQVLKVMVLKCEPQQERLLLSFRLSSKPGPEDKWK 676 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL----GGVDGLLHITDMAW--KRVKHPS 232 +++ Q G V + D G V + V + + ++ K Sbjct: 677 CTPKEKQEVKYQIGEIVDVRILKKKDNGLEVSILEDEDNVVAWIPMLHLSDFVDISKLLW 736 Query: 233 EIVNVGDEITVKVLKFDRERTRVSLGLK-----QLGEDPWVAIAKRYPEGTKLTGRVTNL 287 + GD + +VL + + L K + E+ V G LTG V N+ Sbjct: 737 HCLREGDVLP-RVLYLSAKGEHLILSRKSAVISAVQEEKVVRNFSEIQPGMLLTGYVRNV 795 Query: 288 TDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLK 347 +G FVE GV GL M VG V V+ DEE++R+ L LK Sbjct: 796 MPFGVFVEFPFGVTGLAPKVSMS-DKFVTDTKDHFVVGQTVIAKVMSTDEEKQRVLLNLK 854 Query: 348 QCKANPWQQFAETHNKGDRVEGKIKSITDFG-----IFIGLDGGIDGLVHLSDISWNVAG 402 + + +E+ + ++ ++K I D L G VHL G Sbjct: 855 VSECSSGDSASESFDLLNQYFKELKEIRDLLRRGEPSICELVPGKR--VHLVVQDVREDG 912 Query: 403 EEA-------------------VREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNN 443 + G++ +VL VDA + + ++ E Sbjct: 913 SALFSGSPVTGLTVTATRYHLGDKNIAPGEKRKVLVLHVDALTSEVYVSLR--EELLKQR 970 Query: 444 WVALNKKGAIVTGKVTAVDAKGATVELAD-GVEGYLRASEASRDRVEDATLVLSVGDEVE 502 ++ + + V + A L + G + + D + L VG ++ Sbjct: 971 PKRRLRENSQHSVVVQHITEHFAIASLLETGQLAAVPIACHFNDTFRFDSEKLRVGQKIS 1030 Query: 503 AKFTGVDRKNRAISLSVRAKDEAD 526 A V N + L+V+ + + Sbjct: 1031 ATLKAVKENNHGVLLAVQGPAKKN 1054 Score = 158 bits (401), Expect = 4e-37, Method: Composition-based stats. Identities = 113/598 (18%), Positives = 203/598 (33%), Gaps = 93/598 (15%) Query: 2 TESFAQLFEESLKEI---------------ETRPGSIVRGVVVAIDKDVVLVDAGLKSES 46 +ESF L + KE+ E PG V VV + +D + +G Sbjct: 865 SESF-DLLNQYFKELKEIRDLLRRGEPSICELVPGKRVHLVVQDVREDGSALFSGSPVTG 923 Query: 47 AIPAEQFKNAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAE 106 + + G+ I G++ V + V+ E +S ++ + Sbjct: 924 -LTVTATRYHLGDKNIAPGEKRKVLVLHVDALTSEVYVSLR---EELLKQRPKRRLRENS 979 Query: 107 TVTGVINGKVKGGFTVEL--NGIRAFLPG--SLVDVRPVRDTLHLEGKEL--EFKVIKLD 160 + V+ + L G A +P D G+++ K +K + Sbjct: 980 QHSVVVQHITEHFAIASLLETGQLAAVPIACHFNDTFRFDSEKLRVGQKISATLKAVKEN 1039 Query: 161 ----------QKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVD 210 + NV V R E+ + +L G V G VK++ V Sbjct: 1040 NHGVLLAVQGPAKKNVFVRVRNESETALEEVLPAVKHSLSPGDVVTGTVKSVKPTHVTVA 1099 Query: 211 LGG-VDGLLHITDMAWKRV--KHPSEIVNVGDEITVKVLKF-DRERTR------------ 254 + + G +H + + + P+ + G ++T +V+ D R Sbjct: 1100 IDDKLTGSIHASRILDEVPIGSFPTSTLQAGQKVTARVIGGRDVNTHRCLPITHPHFTQS 1159 Query: 255 -VSLGLK------------QLGEDPWVAIAKRYPEGTKLTGRVT--NLTDYGCFVEIEEG 299 L ++ L E+ + Y G +T V N+ VE+ Sbjct: 1160 IPELSIRPSEQEGEFTAMLNLKEESSLKQLGLYNVGQTVTCFVKKYNMLKNWLEVEVAPD 1219 Query: 300 VEGLVHVSEMDWTNKNI-HPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFA 358 + G V + + K + HP K G + V D R + L L Sbjct: 1220 IRGRVPHLLLSLSTKVLKHPEKSFKNGQAISATVTGTDATERNLCLSL---------TGI 1270 Query: 359 ETHNKGDRVEGKIKSITDF-GIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAA 417 ++ + G + +T G+ I L GG G V + ++ + + +K G + Sbjct: 1271 QSLEQDTISVGMVTKVTPHVGLTIALPGGKTGKVSIFHLNDTYT-DNPLGNFKVGKIVRC 1329 Query: 418 VVLQVDAERERISLGVKQLAEDPFNNW---------VALNKKGAIVTGKVTAVDAKGATV 468 +L + E +I L ++Q +P N + KKG +V G V ++ G Sbjct: 1330 YILSI--ENGKIQLSLRQSRLNPKINSKVEDIEITSIKDVKKGQLVRGYVKSITPSGVFF 1387 Query: 469 ELADGVEGYLRASEASRDRVED---ATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKD 523 L+ + G + S V+ L G + AK GV+RK + I LS+ +D Sbjct: 1388 GLSTSLLGRILFQNVSPYFVQKHSLYKKYLPEGKLLTAKVLGVNRKEKHIELSLLPED 1445 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 86/503 (17%), Positives = 177/503 (35%), Gaps = 63/503 (12%) Query: 54 KNAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVIN 113 K+ + + + V A+ G + +A + + G I Sbjct: 100 KDQEKQKRFKADKTVKAAVKDNVMNIGPLTV---------------EALSEGMLLLGCIK 144 Query: 114 GKVKGGFTVEL-NGIRAFLPGSLVDVRPVRDTLHLE------------------GKELEF 154 + L NG+ F+P + + + G + Sbjct: 145 EVSDYELAISLPNGLSGFVPVTQISDAYSKLLTKQVAQGEVPEELNSLPDIFSPGTLVRC 204 Query: 155 KVIKLDQKRNNVVVSRRAVIESENSAERDQLLEN--LQEGMEVKGIVKNLTDYGAFVDLG 212 V +++ + RR+V S + + ++ L + L GM + G V ++ D+G +D+G Sbjct: 205 IVTSVEKSDD----GRRSVKLSIDPEKVNKGLNSAALTAGMVLSGSVLSVEDHGYLIDIG 260 Query: 213 --GVDGLLHITDMAWKRVKHPSE--IVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWV 268 G L A +K + + +G + +++ E VSL + + + Sbjct: 261 IAGTHAFLP-HQKAKNYIKAVKKGPDLKIGQNLNCLIVEVKNEGRVVSLSIDRSEVAASI 319 Query: 269 AIAKRY------PEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVV 322 A ++ G + RV + G V G+V D+ + + S Sbjct: 320 ATERQNWTLSNLLPGLVVKARVQKVFPLGMKVTFLSYFTGIV-----DFMHTDPEKSMSY 374 Query: 323 NVGDVVEVMVLDIDEERRRISLGLKQ----CKANPWQQFAETHNKGDRVEGKIKSI-TDF 377 + VV+ VL + R + L L+ P Q A+ E +K+ F Sbjct: 375 SPDQVVKACVLSVHPTSRAVRLTLRPPFLHAGGAPRQLPAQRMGA-VVEEATVKAFYKQF 433 Query: 378 GIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLA 437 G LD G L +S + +++G + ++ E + +K Sbjct: 434 GAIFELDDGTLAFARLKHLSKTRKSFKPGA-FQEGCKHKCRIIAYSLMDEMCIVSLKHQI 492 Query: 438 EDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSV 497 + G +V GKV ++ G V++ADG+ G + + S ++ ++ Sbjct: 493 IEARFLQYQDIHTGDVVQGKVLSLKPIGMQVKVADGIRGLVPSLHLSDVILKQPEKKYNI 552 Query: 498 GDEVEAKFTGVDRKNRAISLSVR 520 GDEV+ + + + + + L+++ Sbjct: 553 GDEVKCRVLECNPEGKKLILTLK 575 Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats. Identities = 96/602 (15%), Positives = 205/602 (34%), Gaps = 95/602 (15%) Query: 14 KEIETRPGSIVRGVVVAIDKDVVLVDAGLKSE---SAIPAEQFKNAQGELEI-----QVG 65 +E++ + G IV ++ + + V + + IP + ++ + G Sbjct: 683 QEVKYQIGEIVDVRILKKKDNGLEVSILEDEDNVVAWIPMLHLSDFVDISKLLWHCLREG 742 Query: 66 DEVDVALDAVEDGFGETLLSREKAKRHEAWI-TLEKAYED---AETVTGVINGKVKGGFT 121 D + + + +LSR+ A + + + + +TG + + G Sbjct: 743 DVLP-RVLYLSAKGEHLILSRKSAVISAVQEEKVVRNFSEIQPGMLLTGYVRNVMPFGVF 801 Query: 122 VEL-NGIRAFLPGSLVDVRPVRDTLH--LEGKELEFKVIKLDQKRNNVVVSRRAV----- 173 VE G+ P + + V DT + G+ + KV+ D+++ V+++ + Sbjct: 802 VEFPFGVTGLAPKVSMSDKFVTDTKDHFVVGQTVIAKVMSTDEEKQRVLLNLKVSECSSG 861 Query: 174 --------IESENSAERDQLLE----------NLQEGMEVKGIVKNLTDYG-AFVDLGGV 214 + ++ E ++ + L G V +V+++ + G A V Sbjct: 862 DSASESFDLLNQYFKELKEIRDLLRRGEPSICELVPGKRVHLVVQDVREDGSALFSGSPV 921 Query: 215 DGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRY 274 GL + R + + G++ V VL D + V + L++ +R Sbjct: 922 TGLT----VTATRYHLGDKNIAPGEKRKVLVLHVDALTSEVYVSLREELL--KQRPKRRL 975 Query: 275 PEGTKLTGRVTNLTDYGCFVEIEE-GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVL 333 E ++ + V ++T++ + E G V ++ + + S+ + VG + + Sbjct: 976 RENSQHSVVVQHITEHFAIASLLETGQLAAVPIA-CHFNDTFRFDSEKLRVGQKISATLK 1034 Query: 334 DIDEERRRISLGL----------------KQCKANPWQQFAETHNKGDRVEGKIKSITDF 377 + E + L + + + + GD V G +KS+ Sbjct: 1035 AVKENNHGVLLAVQGPAKKNVFVRVRNESETALEEVLPAVKHSLSPGDVVTGTVKSVKPT 1094 Query: 378 GIFIGLDGGIDGLVHLSDISWNVAGEE-AVREYKKGDEIAAVVLQ-VDAERER------- 428 + + +D + G +H S I V + G ++ A V+ D R Sbjct: 1095 HVTVAIDDKLTGSIHASRILDEVPIGSFPTSTLQAGQKVTARVIGGRDVNTHRCLPITHP 1154 Query: 429 ------ISLGVKQ------------LAEDPFNNWVALNKKGAIVTGKVTA--VDAKGATV 468 L ++ L E+ + L G VT V + V Sbjct: 1155 HFTQSIPELSIRPSEQEGEFTAMLNLKEESSLKQLGLYNVGQTVTCFVKKYNMLKNWLEV 1214 Query: 469 ELADGVEGYLR--ASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEAD 526 E+A + G + S ++ G + A TG D R + LS+ + Sbjct: 1215 EVAPDIRGRVPHLLLSLSTKVLKHPEKSFKNGQAISATVTGTDATERNLCLSLTGIQSLE 1274 Query: 527 EK 528 + Sbjct: 1275 QD 1276 Score = 75.0 bits (183), Expect = 7e-12, Method: Composition-based stats. Identities = 41/218 (18%), Positives = 85/218 (38%), Gaps = 30/218 (13%) Query: 336 DEERRR-------ISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGID 388 D+E+++ + +K N E ++G + G IK ++D+ + I L G+ Sbjct: 101 DQEKQKRFKADKTVKAAVKDNVMNIGPLTVEALSEGMLLLGCIKEVSDYELAISLPNGLS 160 Query: 389 GLVHLSDISWNVAG---------------EEAVREYKKGDEIAAVVLQV---DAERERIS 430 G V ++ IS + + G + +V V D R + Sbjct: 161 GFVPVTQISDAYSKLLTKQVAQGEVPEELNSLPDIFSPGTLVRCIVTSVEKSDDGRRSVK 220 Query: 431 LGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELA-DGVEGYLRASEASRDRVE 489 L + + N AL G +++G V +V+ G +++ G +L + +++ ++ Sbjct: 221 LSIDPEKVNKGLNSAALT-AGMVLSGSVLSVEDHGYLIDIGIAGTHAFLPH-QKAKNYIK 278 Query: 490 DATLV--LSVGDEVEAKFTGVDRKNRAISLSVRAKDEA 525 L +G + V + R +SLS+ + A Sbjct: 279 AVKKGPDLKIGQNLNCLIVEVKNEGRVVSLSIDRSEVA 316 >UniRef50_A4XKP1 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XKP1_CALS8 Length = 662 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 87/379 (22%), Positives = 175/379 (46%), Gaps = 11/379 (2%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQF---KNAQG 58 + FA+L ++S EI + G IV+G ++ +++D +LVD G K+E I + N Sbjct: 287 NQDFAKLLDKSFAEI--KRGEIVKGKIIKVEQDYLLVDIGYKAEGIIYKNEIFKNANVNL 344 Query: 59 ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 + + ++ + D G +LS+ KA + L +E + V+ + Sbjct: 345 KNIFNENEIIEAVVIKESDEEGNVVLSKLKADSIYGFNELMAKFESKTPIKIVVKQIRER 404 Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 E GI F+P S + + GK E +++ +D + SR+ ++ Sbjct: 405 SIVGEFRGINVFVPISQWA---EEVSSSIIGKVFEVEIVDIDTDKKIAFGSRKFLLRQAQ 461 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAW-KRVKHPSEIVNV 237 + Q +E+L + G++ + G V+ G+ G + +++++ KR++ ++ V Sbjct: 462 EKKIQQAIESLDFNKDYDGVIAEIRQKGIVVNFEGLRGFVPASEISYSKRIEDVKKLFKV 521 Query: 238 GDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE 297 G+++ V+V+ D+++ ++ L +K+ ED W+ K G + VT + +G V I Sbjct: 522 GEQVKVRVIDIDKQKKQIYLSIKKTQEDEWIKKVKNLYLGMLVDVEVTKVLSFGLVVWIL 581 Query: 298 E-GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQ 356 + ++G VHVS + N + VGD ++ +++IDE+RRRI L LK + Sbjct: 582 DCELDGFVHVSNIPLGY-NQRLHSLYKVGDKIKAKIIEIDEQRRRIGLSLKDLYEEEEKI 640 Query: 357 FAETHNKGDRVEGKIKSIT 375 + + + +I Sbjct: 641 AEHKEDFVITIADIVNNIK 659 Score = 184 bits (467), Expect = 8e-45, Method: Composition-based stats. Identities = 83/366 (22%), Positives = 161/366 (43%), Gaps = 15/366 (4%) Query: 172 AVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKH 230 + + + D+ ++ G VKG + + VD+G +G+++ ++ + Sbjct: 284 QIDNQDFAKLLDKSFAEIKRGEIVKGKIIKVEQDYLLVDIGYKAEGIIYKNEIFKNANVN 343 Query: 231 PSEIVNVGDEITVKVLKFDRERTRVSLG-LKQLGEDPWVAIAKRYPEGTKLTGRVTNLTD 289 I N + I V+K E V L LK + + ++ T + V + + Sbjct: 344 LKNIFNENEIIEAVVIKESDEEGNVVLSKLKADSIYGFNELMAKFESKTPIKIVVKQIRE 403 Query: 290 YGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLG---- 345 E G+ V +S+ + KV EV ++DID +++ Sbjct: 404 RSIVGEF-RGINVFVPISQWAEEVSSSIIGKVF------EVEIVDIDTDKKIAFGSRKFL 456 Query: 346 LKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEA 405 L+Q + QQ E+ + +G I I GI + + G+ G V S+IS++ E+ Sbjct: 457 LRQAQEKKIQQAIESLDFNKDYDGVIAEIRQKGIVVNFE-GLRGFVPASEISYSKRIEDV 515 Query: 406 VREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKG 465 + +K G+++ V+ +D ++++I L +K+ ED + V G +V +VT V + G Sbjct: 516 KKLFKVGEQVKVRVIDIDKQKKQIYLSIKKTQEDEWIKKVKNLYLGMLVDVEVTKVLSFG 575 Query: 466 ATVELAD-GVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDE 524 V + D ++G++ S + + VGD+++AK +D + R I LS++ E Sbjct: 576 LVVWILDCELDGFVHVSNIPLGYNQRLHSLYKVGDKIKAKIIEIDEQRRRIGLSLKDLYE 635 Query: 525 ADEKDA 530 +EK A Sbjct: 636 EEEKIA 641 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 77/361 (21%), Positives = 164/361 (45%), Gaps = 20/361 (5%) Query: 103 EDAETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRPVRDTLHLEGKE--LEFKVIKL 159 + E V G I + V++ + + + + ++ + +E VIK Sbjct: 302 KRGEIVKGKIIKVEQDYLLVDIGYKAEGIIYKNEIFKNANVNLKNIFNENEIIEAVVIKE 361 Query: 160 DQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLH 219 + NVV+S+ +++++ ++L+ + +K +VK + + + G++ + Sbjct: 362 SDEEGNVVLSK---LKADSIYGFNELMAKFESKTPIKIVVKQIRERSIVGEFRGINVFVP 418 Query: 220 ITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLG----LKQLGEDPWVAIAKRYP 275 I+ A + +G V+++ D ++ L+Q E + Sbjct: 419 ISQWAEEVSSSI-----IGKVFEVEIVDIDTDKKIAFGSRKFLLRQAQEKKIQQAIESLD 473 Query: 276 EGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDI 335 G + + G V E G+ G V SE+ ++ + K+ VG+ V+V V+DI Sbjct: 474 FNKDYDGVIAEIRQKGIVVNFE-GLRGFVPASEISYSKRIEDVKKLFKVGEQVKVRVIDI 532 Query: 336 DEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIG-LDGGIDGLVHLS 394 D+++++I L +K+ + + W + + G V+ ++ + FG+ + LD +DG VH+S Sbjct: 533 DKQKKQIYLSIKKTQEDEWIKKVKNLYLGMLVDVEVTKVLSFGLVVWILDCELDGFVHVS 592 Query: 395 DISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIV 454 +I + YK GD+I A ++++D +R RI L +K L E+ +A +K+ ++ Sbjct: 593 NIPLGY-NQRLHSLYKVGDKIKAKIIEIDEQRRRIGLSLKDLYEE--EEKIAEHKEDFVI 649 Query: 455 T 455 T Sbjct: 650 T 650 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 50/273 (18%), Positives = 109/273 (39%), Gaps = 15/273 (5%) Query: 268 VAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDV 327 G + G++ + V+I EG+++ +E+ + N N++ + N ++ Sbjct: 295 DKSFAEIKRGEIVKGKIIKVEQDYLLVDIGYKAEGIIYKNEI-FKNANVNLKNIFNENEI 353 Query: 328 VEVMVLDIDEERRRISLG-LKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGG 386 +E +V+ +E + L LK + + ++ +K I + I G Sbjct: 354 IEAVVIKESDEEGNVVLSKLKADSIYGFNELMAKFESKTPIKIVVKQIRERSIVGEF-RG 412 Query: 387 IDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVK----QLAEDPFN 442 I+ V +S W ++ G ++ +D +++ K Q E Sbjct: 413 INVFVPISQ--WAEEVSSSI----IGKVFEVEIVDIDTDKKIAFGSRKFLLRQAQEKKIQ 466 Query: 443 NWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEAS-RDRVEDATLVLSVGDEV 501 + G + + KG V +G+ G++ ASE S R+ED + VG++V Sbjct: 467 QAIESLDFNKDYDGVIAEIRQKGIVVNF-EGLRGFVPASEISYSKRIEDVKKLFKVGEQV 525 Query: 502 EAKFTGVDRKNRAISLSVRAKDEADEKDAIATV 534 + + +D++ + I LS++ E + + + Sbjct: 526 KVRVIDIDKQKKQIYLSIKKTQEDEWIKKVKNL 558 >UniRef50_UPI0000F2B0DB PREDICTED: similar to KIAA0185 n=1 Tax=Monodelphis domestica RepID=UPI0000F2B0DB Length = 1773 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 116/551 (21%), Positives = 208/551 (37%), Gaps = 37/551 (6%) Query: 10 EESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVD 69 E++ PG +V+ V + + + + + + Q V Sbjct: 270 EQNWTLDNLLPGLVVKAQVQKVTPYGLSLSFLSSFTGLVDFMHLDSKKTGHYFQT-QMVR 328 Query: 70 VALDAVEDGFGETLLSREKAKRHEAW------ITLEKAYEDAETVTGVINGKVKGGFTVE 123 + +V L+ + L A + V K G T Sbjct: 329 ACILSVHPRTKSVRLTLHSSFLQAGRPITRLCHHLIGAVLNDVPVQSF---YTKAGATFR 385 Query: 124 L-NGIRAFLPGSLVD--VRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 L +G A+ + + + G +VI + ++S + I Sbjct: 386 LKDGSLAYARIRHLSQTEKSFKPEKFKPGNLHRCRVIDFSPMDDLALLSLKTSIIEAPFL 445 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGD 239 ++Q G VKG V L YG V + + GL+ +A ++++P + V D Sbjct: 446 R----YHDIQPGQIVKGKVFTLRSYGMIVKVTEQIKGLVPTLHLADVQIRNPQKKYRVQD 501 Query: 240 EITVKVLKFDRERTRVSLGLKQLGED---PWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI 296 E+ +VL D E ++ + LK+ + P + K + G ++++ D GC V+ Sbjct: 502 EVKCRVLMCDPENKKLLMTLKKTLVESSLPALTNYKEAKPDLQTHGFISSIKDCGCIVKF 561 Query: 297 EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQ 356 V GLV E+ P +V VG VV+V VL + E+ R+ L + + Sbjct: 562 YNDVRGLVPQREL-GAQPISAPEEVFYVGQVVKVTVLKSEPEQERMLLSFRLSNDKEMES 620 Query: 357 FAETHNK-----GDRVEGKIKSITDFGIFIG-LDGGIDGLVHLSDISWNVAGEEAVREYK 410 A++ K G V+ K+K T+ G+ + L I L+ + +S NV + + + Sbjct: 621 TAQSQKKAMVKTGQLVDVKVKKKTEKGLEVSILPDDISALLPTTHLSDNVTNSQLLCYWL 680 Query: 411 KGDEIAAVVLQVDAERERISLGVKQLA-------EDPFNNWVALNKKGAIVTGKVTAVDA 463 + +I VL + I L K +DP + + G ++TG V ++ A Sbjct: 681 QAGDILHKVLCLSHSDGHIVLCRKPALISAVESGQDP--KVFSEFQPGMLLTGFVKSIKA 738 Query: 464 KGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKD 523 G V+ G+ G S S V + G V AK T VD + + + LS+R D Sbjct: 739 YGIFVQFPSGLSGLAPKSALSDKFVTTISDHFVEGQTVVAKVTNVDEEKQRMLLSLRLSD 798 Query: 524 EADEKDAIATV 534 + E +++ Sbjct: 799 VSQEDTTASSL 809 Score = 190 bits (484), Expect = 8e-47, Method: Composition-based stats. Identities = 102/577 (17%), Positives = 200/577 (34%), Gaps = 48/577 (8%) Query: 18 TRPGSIVRGVVVAIDKDVVLVDAGLKSESAI-----------PAEQFKNAQGELE----- 61 G + G V ++ +++ + + + + LE Sbjct: 80 LSEGMRLLGCVKEVNNLELVISLPNDLWGYVQATNICDAYTKKLNEQVDREEPLEDLAPL 139 Query: 62 ---IQVGDEVDVALDAVE---DGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGK 115 Q G V A+ +++ LS + A + +TG ++ Sbjct: 140 SKLFQPGMLVRCAVSSLKSTSKKNKSIKLSLNPKDVNGVLS--PAALKPGMLLTGTVDSV 197 Query: 116 VKGGFTVELN--GIRAFLP--GSLVDVRPVRDTLHL-EGKELEFKVIKLDQKRNNVVVS- 169 G+ V++ G +AFLP V+ L G+ L + ++ +V +S Sbjct: 198 EDHGYLVDIGVGGTKAFLPWQKEQEYVKQKNKGTKLQVGQYLNCLIEEVKGNGGSVRLST 257 Query: 170 -RRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVD-LGGVDGLLHITDMAWKR 227 + V + + E++ L+NL G+ VK V+ +T YG + L GL+ + K+ Sbjct: 258 IQSEVSAAIATEEQNWTLDNLLPGLVVKAQVQKVTPYGLSLSFLSSFTGLVDFMHLDSKK 317 Query: 228 VKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQL---GEDPWVAIAKRYPEGTKLTGRV 284 H + +L V L L P + V Sbjct: 318 TGH---YFQT-QMVRACILSVHPRTKSVRLTLHSSFLQAGRPITRLCHHLIGAVLNDVPV 373 Query: 285 TNL-TDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRIS 343 + T G +++G + + T K+ P K G++ V+D Sbjct: 374 QSFYTKAGATFRLKDGSLAYARIRHLSQTEKSFKPEK-FKPGNLHRCRVIDFSPMDDLAL 432 Query: 344 LGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGE 403 L LK G V+GK+ ++ +G+ + + I GLV ++ +V Sbjct: 433 LSLKTSIIEAPFLRYHDIQPGQIVKGKVFTLRSYGMIVKVTEQIKGLVPTLHLA-DVQIR 491 Query: 404 EAVREYKKGDEIAAVVLQVDAERERISLGVKQLAED---PFNNWVALNKKGAIVTGKVTA 460 ++Y+ DE+ VL D E +++ + +K+ + P K G +++ Sbjct: 492 NPQKKYRVQDEVKCRVLMCDPENKKLLMTLKKTLVESSLPALTNYKEAKPDLQTHGFISS 551 Query: 461 VDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 + G V+ + V G + E + V VG V+ + + + LS R Sbjct: 552 IKDCGCIVKFYNDVRGLVPQRELGAQPISAPEEVFYVGQVVKVTVLKSEPEQERMLLSFR 611 Query: 521 AKDEADEKDAIATVNKQEDANFSNNAMAEAFKAAKGE 557 +++K+ +T Q+ A + + K E Sbjct: 612 L---SNDKEMESTAQSQKKAMVKTGQLVDVKVKKKTE 645 Score = 184 bits (468), Expect = 6e-45, Method: Composition-based stats. Identities = 106/537 (19%), Positives = 203/537 (37%), Gaps = 36/537 (6%) Query: 13 LKEIETRPGSIVRGVVVAIDKDVVLVDAG-LKSESAIPA----EQFKNAQGELEIQVGDE 67 L +PG ++ G V +++ LVD G +++ +P E K ++QVG Sbjct: 179 LSPAALKPGMLLTGTVDSVEDHGYLVDIGVGGTKAFLPWQKEQEYVKQKNKGTKLQVGQY 238 Query: 68 VDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYED-----AETVTGVINGKVKGGFTV 122 ++ ++ V+ G LS +++ A T E+ + V + G ++ Sbjct: 239 LNCLIEEVKGNGGSVRLSTIQSEVSAAIATEEQNWTLDNLLPGLVVKAQVQKVTPYGLSL 298 Query: 123 EL-NGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 + + +D + + + + + ++ + + +V ++ + + Sbjct: 299 SFLSSFTGLVDFMHLDSKKTGH--YFQTQMVRACILSVHPRTKSVRLTLHSSF--LQAGR 354 Query: 182 RDQLLENLQEGMEVKGI-VKNL-TDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVG 238 L + G + + V++ T GA L G I ++ E G Sbjct: 355 PITRLCHHLIGAVLNDVPVQSFYTKAGATFRLKDGSLAYARIRHLSQTEKSFKPEKFKPG 414 Query: 239 DEITVKVLKFDRERTRVSLGLK-QLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE 297 + +V+ F L LK + E P++ P G + G+V L YG V++ Sbjct: 415 NLHRCRVIDFSPMDDLALLSLKTSIIEAPFLRYHDIQP-GQIVKGKVFTLRSYGMIVKVT 473 Query: 298 EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN---PW 354 E ++GLV + + +P K V D V+ VL D E +++ + LK+ P Sbjct: 474 EQIKGLVPTLHLA-DVQIRNPQKKYRVQDEVKCRVLMCDPENKKLLMTLKKTLVESSLPA 532 Query: 355 QQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDE 414 + + G I SI D G + + GLV ++ + G Sbjct: 533 LTNYKEAKPDLQTHGFISSIKDCGCIVKFYNDVRGLVPQRELGAQ-PISAPEEVFYVGQV 591 Query: 415 IAAVVLQVDAERERISLGV-----KQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVE 469 + VL+ + E+ER+ L K++ + A+ K G +V KV KG V Sbjct: 592 VKVTVLKSEPEQERMLLSFRLSNDKEMESTAQSQKKAMVKTGQLVDVKVKKKTEKGLEVS 651 Query: 470 -LADGVEGYLRASEASRDRVEDATLV---LSVGDEVEAKFTGVDRKNRAISLSVRAK 522 L D + L + S + V ++ L+ L GD + K + + I L + Sbjct: 652 ILPDDISALLPTTHLSDN-VTNSQLLCYWLQAGDILH-KVLCLSHSDGHIVLCRKPA 706 Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats. Identities = 88/520 (16%), Positives = 178/520 (34%), Gaps = 55/520 (10%) Query: 49 PAEQFKNAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETV 108 Q + + + + G+ + LLS + + ++ + V Sbjct: 398 HLSQTEKSFKPEKFKPGNLHRCRVIDFSPMDDLALLSLKTSIIEAPFLRYHDIQP-GQIV 456 Query: 109 TGVINGKVKGGFTVEL-NGIRAFLP-GSLVDVRPVRDTLHL-EGKELEFKVIKLDQKRNN 165 G + G V++ I+ +P L DV+ E++ +V+ D + Sbjct: 457 KGKVFTLRSYGMIVKVTEQIKGLVPTLHLADVQIRNPQKKYRVQDEVKCRVLMCDPENKK 516 Query: 166 VVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMA 224 ++++ + + E+S + + ++ G + ++ D G V V GL+ ++ Sbjct: 517 LLMTLKKTL-VESSLPALTNYKEAKPDLQTHGFISSIKDCGCIVKFYNDVRGLVPQRELG 575 Query: 225 WKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGL-----KQLGEDPWVAIAKRYPEGTK 279 + + P E+ VG + V VLK + E+ R+ L K++ G Sbjct: 576 AQPISAPEEVFYVGQVVKVTVLKSEPEQERMLLSFRLSNDKEMESTAQSQKKAMVKTGQL 635 Query: 280 LTGRVTNLTDYGCFVEIEEG-VEGLVHVSEMDWTNKNIHPSKV-VNVGDVVEVMVLDIDE 337 + +V T+ G V I + L+ + + N + GD++ VL + Sbjct: 636 VDVKVKKKTEKGLEVSILPDDISALLPTTHLSDNVTNSQLLCYWLQAGDILH-KVLCLSH 694 Query: 338 ERRRISLGLKQCKANPWQ-----QFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVH 392 I L K + + + G + G +KSI +GIF+ G+ GL Sbjct: 695 SDGHIVLCRKPALISAVESGQDPKVFSEFQPGMLLTGFVKSIKAYGIFVQFPSGLSGLAP 754 Query: 393 LSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVK------------------ 434 S +S + +G + A V VD E++R+ L ++ Sbjct: 755 KSALSDKFVTT-ISDHFVEGQTVVAKVTNVDEEKQRMLLSLRLSDVSQEDTTASSLTLLS 813 Query: 435 -------------QLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRAS 481 + +A G +V V + + G+ V V G + Sbjct: 814 QCLEELQGVRSLMSSRDSVLTQTLAEMTPGLLVDLVVQDMSSDGSLVFSNGSVPGLV--- 870 Query: 482 EASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRA 521 + + G +A VD + + +S+R Sbjct: 871 -LRASKYHQGGKAVDPGQRTKAVILHVDTQKSEVHVSLRQ 909 Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 100/544 (18%), Positives = 194/544 (35%), Gaps = 62/544 (11%) Query: 13 LKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA---QGELEIQVGDEVD 69 L+ + +PG IV+G V + ++V + + +P + + + +V DEV Sbjct: 445 LRYHDIQPGQIVKGKVFTLRSYGMIVKVTEQIKGLVPTLHLADVQIRNPQKKYRVQDEVK 504 Query: 70 VALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVT--GVINGKVKGGFTVEL-NG 126 + + + L++ +K + L E + G I+ G V+ N Sbjct: 505 CRVLMCDPENKKLLMTLKKTLVESSLPALTNYKEAKPDLQTHGFISSIKDCGCIVKFYND 564 Query: 127 IRAFLPGSLVDVRPV--RDTLHLEGKELEFKVIKLDQKRNNVVVS-RRAVIESENSAERD 183 +R +P + +P+ + + G+ ++ V+K + ++ +++S R + + S + Sbjct: 565 VRGLVPQRELGAQPISAPEEVFYVGQVVKVTVLKSEPEQERMLLSFRLSNDKEMESTAQS 624 Query: 184 QLLENLQEGMEVKGIVKNLTDYGAFVDL--GGVDGLLHITDMAWKRVKHPSEIV--NVGD 239 Q ++ G V VK T+ G V + + LL T ++ GD Sbjct: 625 QKKAMVKTGQLVDVKVKKKTEKGLEVSILPDDISALLPTTHLSDNVTNSQLLCYWLQAGD 684 Query: 240 EITVKVLKFDRERTRVSLGLK-----QLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFV 294 + KVL + L K + + + G LTG V ++ YG FV Sbjct: 685 ILH-KVLCLSHSDGHIVLCRKPALISAVESGQDPKVFSEFQPGMLLTGFVKSIKAYGIFV 743 Query: 295 EIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPW 354 + G+ GL S + S G V V ++DEE++R+ L L+ + Sbjct: 744 QFPSGLSGLAPKSALSDKFVTT-ISDHFVEGQTVVAKVTNVDEEKQRMLLSLRLSDVSQE 802 Query: 355 QQFAET-------------------------------HNKGDRVEGKIKSITDFGIFIGL 383 A + G V+ ++ ++ G + Sbjct: 803 DTTASSLTLLSQCLEELQGVRSLMSSRDSVLTQTLAEMTPGLLVDLVVQDMSSDGSLVFS 862 Query: 384 DGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNN 443 +G + GLV + + G AV+L VD ++ + + ++Q N Sbjct: 863 NGSVPGLV-----LRASKYHQGGKAVDPGQRTKAVILHVDTQKSEVHVSLRQEL---VNR 914 Query: 444 WVALNKKGAIVTGKVTAVDAKGATVELAD--GVEGYLRASEASRDRVEDATLVLSVGDEV 501 V KK + ++ A L + + + AS + D + L VG V Sbjct: 915 KVKQLKKDTEHRAVIEHLEKTFAIASLVETGQLIAFPVASHLNDTFRFD-SEKLQVGQGV 973 Query: 502 EAKF 505 Sbjct: 974 SVII 977 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 97/599 (16%), Positives = 200/599 (33%), Gaps = 100/599 (16%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA---QGELEIQVGDEVDVALD 73 E +PG ++ G V +I + V P + G V + Sbjct: 722 EFQPGMLLTGFVKSIKAYGIFVQFPSGLSGLAPKSALSDKFVTTISDHFVEGQTVVAKVT 781 Query: 74 AVEDGFGETLLSREKAKRH----------------EAWITLEKAYEDAETVTGVINGKVK 117 V++ LLS + E + ++V ++ Sbjct: 782 NVDEEKQRMLLSLRLSDVSQEDTTASSLTLLSQCLEELQGVRSLMSSRDSVLTQTLAEMT 841 Query: 118 GGFTVEL-------NGIRAF----LPGSLVDVRPVRDTLHLE--GKELEFKVIKLDQKRN 164 G V+L +G F +PG ++ G+ + ++ +D +++ Sbjct: 842 PGLLVDLVVQDMSSDGSLVFSNGSVPGLVLRASKYHQGGKAVDPGQRTKAVILHVDTQKS 901 Query: 165 NVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGA---FVDLGGVDGLLHIT 221 V VS R + + ++ L++ E + ++++L A V+ G + + Sbjct: 902 EVHVSLRQELVNRK-------VKQLKKDTEHRAVIEHLEKTFAIASLVETGQLIAFPVAS 954 Query: 222 DMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSL----GLKQLGE------------D 265 + SE + VG ++V + + L +K+ D Sbjct: 955 HLNDTFRFD-SEKLQVGQGVSVIIKSTKPCDIGLFLAVESSVKKRTPALPSVAPESAGQD 1013 Query: 266 PWVAI----AKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSE-MDWTNKNIHPSK 320 P V P G +TG V ++ V +E G+ G +H S+ +D + HP+ Sbjct: 1014 PGVVSELLEKPTLPIGEMVTGTVKSIKATHVIVTLENGLTGYIHASQILDDVSHGTHPTT 1073 Query: 321 VVNVGDVVEVMVLD----IDEERRRIS----------LGLKQCKANP------------W 354 + VG+ V V+ + + IS L ++ + Sbjct: 1074 TLKVGNPVTARVIGQRTWLTHKSLPISHPSSTQTVSELSIRPSELEKNISSDPSTQSSSP 1133 Query: 355 QQFAETHNKGDRVEGKIK--SITDFGIFIGLDGGIDGLVH--LSDISWNVAGEEAVREYK 410 + + + G V ++ ++ + + + I G + L+ +S+ ++ Sbjct: 1134 TEKLKQYFPGQTVVCFMRKFNVIKKWLEVEITSDIRGRIPQLLTSLSFKTLALYVLQPPL 1193 Query: 411 KGDEIAAV---VLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGAT 467 G + + R + +K EDP + K+G ++ G V A+ +G Sbjct: 1194 TGHAQSFKYYPLPSSSPLSSRTNPKMKSKIEDPEVTSMKDIKEGQLLRGYVEAIKKQGIF 1253 Query: 468 VELADGVEGYLRASEASRDRVEDA---TLVLSVGDEVEAKFTGVDRKNRAISLSVRAKD 523 ++ + G ++ + D L G + AK V+RK + LS KD Sbjct: 1254 FRISPTLVGRVKYQHVTTYLPFDRALYQTYLPEGKLLSAKVLRVNRKQNLLYLSFLPKD 1312 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 67/390 (17%), Positives = 132/390 (33%), Gaps = 37/390 (9%) Query: 162 KRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHI 220 K ++ +SE +E L EGM + G VK + + + L + G + Sbjct: 53 KNKRSKTEKKEPSKSEAEQSGILSIEVLSEGMRLLGCVKEVNNLELVISLPNDLWGYVQA 112 Query: 221 TDMAWKRVKH----------------PSEIVNVGDEITVKVLKF---DRERTRVSLGLKQ 261 T++ K S++ G + V ++ + L L Sbjct: 113 TNICDAYTKKLNEQVDREEPLEDLAPLSKLFQPGMLVRCAVSSLKSTSKKNKSIKLSLNP 172 Query: 262 LGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE-EGVEGLVHVSEMDWTNKNIHPSK 320 + ++ A P G LTG V ++ D+G V+I G + + + K + Sbjct: 173 KDVNGVLSPAALKP-GMLLTGTVDSVEDHGYLVDIGVGGTKAFLPWQKEQEYVKQKNKGT 231 Query: 321 VVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHN------KGDRVEGKIKSI 374 + VG + ++ ++ + L Q + + E + G V+ +++ + Sbjct: 232 KLQVGQYLNCLIEEVKGNGGSVRLSTIQSEVSAAIATEEQNWTLDNLLPGLVVKAQVQKV 291 Query: 375 TDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVK 434 T +G+ + GLV + G Y + + A +L V + + L + Sbjct: 292 TPYGLSLSFLSSFTGLVDFMHLDSKKTG-----HYFQTQMVRACILSVHPRTKSVRLTLH 346 Query: 435 Q--LAEDPFNNWVALNKKGAIV-TGKVTAV-DAKGATVELADGVEGYLRASEASRDRVED 490 L + + GA++ V + GAT L DG Y R S+ Sbjct: 347 SSFLQAGRPITRLCHHLIGAVLNDVPVQSFYTKAGATFRLKDGSLAYARIRHLSQTEKSF 406 Query: 491 ATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 G+ + + LS++ Sbjct: 407 KPEKFKPGNLHRCRVIDFSPMDDLALLSLK 436 >UniRef50_A8V2R4 Ribosomal protein S01 n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V2R4_9AQUI Length = 368 Score = 234 bits (597), Expect = 8e-60, Method: Composition-based stats. Identities = 110/361 (30%), Positives = 180/361 (49%), Gaps = 18/361 (4%) Query: 18 TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVED 77 G I+ G +V VD G K+ES I E+ + +Q G ++ Sbjct: 21 YHKGDILEGEIVKFADKYAFVDVGQKTESVINKEEVE------GLQEGAKIRAVFTGKRT 74 Query: 78 GFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVD 137 G LLSR+ EA +E AY++ E V + +++ GF V+L GI+AFLP S Sbjct: 75 SEGYNLLSRKPLIFREALEKVENAYKNQEKVPAKLKKQLEKGFLVDLGGIQAFLPYSESG 134 Query: 138 VRPVRDTLHLEGKELEFKVIKLDQKRN--NVVVSRRAVIESENSAERDQLLENLQEGMEV 195 ++ E E ++KLD+ R N+VVSR+ V+E E ++++L ++EGM + Sbjct: 135 LKKEEKLPE----EFEVYILKLDKNRKIPNIVVSRKKVLEEEKQKKKEKLWSEIKEGMTI 190 Query: 196 KGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTR 254 V + D GA V +G + G L + +W R K + + G EI KV++ D E+ + Sbjct: 191 PAKVVKVQDNGAVVIIGDLIYGFLPASLYSWYREKSIKD-LQKGQEIEAKVVQKDTEKQK 249 Query: 255 VSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNK 314 + L K L E+PW Y EG +T + + YG V++E ++G +H SE D + Sbjct: 250 LILSTKALEENPWEKF--PYSEGDIVTTVIKEINPYGLVVKVE-NLQGFIHKSETDHLHP 306 Query: 315 NIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSI 374 SK G V+ ++++D E +++ L +KQ NP +F + H +G+ + KIK+I Sbjct: 307 ERFKSK-FKEGQEVQAKIIELDRENQKLKLSIKQATENPLDKFLKEHPEGETITAKIKNI 365 Query: 375 T 375 Sbjct: 366 K 366 Score = 164 bits (416), Expect = 7e-39, Method: Composition-based stats. Identities = 76/360 (21%), Positives = 150/360 (41%), Gaps = 30/360 (8%) Query: 190 QEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKF 248 +G ++G + D AFVD+G + +++ ++ E + G +I Sbjct: 22 HKGDILEGEIVKFADKYAFVDVGQKTESVINKEEV---------EGLQEGAKIRAVFTGK 72 Query: 249 DRERTRVSLGLKQL-GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVS 307 L K L + + Y K+ ++ + G V++ G++ + S Sbjct: 73 RTSEGYNLLSRKPLIFREALEKVENAYKNQEKVPAKLKKQLEKGFLVDLG-GIQAFLPYS 131 Query: 308 EMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERR--RISLGLKQCKANPWQQF----AETH 361 E + P + EV +L +D+ R+ I + K+ Q+ Sbjct: 132 ESGLKKEEKLPEEF-------EVYILKLDKNRKIPNIVVSRKKVLEEEKQKKKEKLWSEI 184 Query: 362 NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQ 421 +G + K+ + D G + + I G + S SW E+++++ +KG EI A V+Q Sbjct: 185 KEGMTIPAKVVKVQDNGAVVIIGDLIYGFLPASLYSW--YREKSIKDLQKGQEIEAKVVQ 242 Query: 422 VDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRAS 481 D E++++ L K L E+P+ + +G IVT + ++ G V++ + ++G++ S Sbjct: 243 KDTEKQKLILSTKALEENPWEKFP--YSEGDIVTTVIKEINPYGLVVKV-ENLQGFIHKS 299 Query: 482 EASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDAN 541 E E G EV+AK +DR+N+ + LS++ E + + E Sbjct: 300 ETDHLHPERFKSKFKEGQEVQAKIIELDRENQKLKLSIKQATENPLDKFLKEHPEGETIT 359 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 77/369 (20%), Positives = 161/369 (43%), Gaps = 27/369 (7%) Query: 102 YEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQ 161 Y + + G I V++ + + EG ++ Sbjct: 21 YHKGDILEGEIVKFADKYAFVDVGQ------KTESVINKEEVEGLQEGAKIRAVFTGKRT 74 Query: 162 KRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHIT 221 ++SR+ +I E + + +N + +V +K + G VDLGG+ L + Sbjct: 75 SEGYNLLSRKPLIFREALEKVENAYKNQE---KVPAKLKKQLEKGFLVDLGGIQAFLPYS 131 Query: 222 DMAWKRVKHPSEIVNVGDEITVKVLKFDRERT--RVSLGLKQLGEDPWVA----IAKRYP 275 + K+ + E V +LK D+ R + + K++ E+ + Sbjct: 132 ESGLKKEEKLPEEF------EVYILKLDKNRKIPNIVVSRKKVLEEEKQKKKEKLWSEIK 185 Query: 276 EGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDI 335 EG + +V + D G V I + + G + S W + K + G +E V+ Sbjct: 186 EGMTIPAKVVKVQDNGAVVIIGDLIYGFLPASLYSWYRE--KSIKDLQKGQEIEAKVVQK 243 Query: 336 DEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSD 395 D E++++ L K + NPW++F +++GD V IK I +G+ + ++ + G +H S+ Sbjct: 244 DTEKQKLILSTKALEENPWEKFP--YSEGDIVTTVIKEINPYGLVVKVE-NLQGFIHKSE 300 Query: 396 ISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVT 455 + ++ E ++K+G E+ A ++++D E +++ L +KQ E+P + ++ + +G +T Sbjct: 301 -TDHLHPERFKSKFKEGQEVQAKIIELDRENQKLKLSIKQATENPLDKFLKEHPEGETIT 359 Query: 456 GKVTAVDAK 464 K+ + K Sbjct: 360 AKIKNIKTK 368 Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats. Identities = 61/291 (20%), Positives = 123/291 (42%), Gaps = 19/291 (6%) Query: 5 FAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQV 64 F + E+ + + V + + LVD G ++ +P + + E Sbjct: 88 FREALEKVENAYKNQ--EKVPAKLKKQLEKGFLVDLGG-IQAFLPYSESGLKKEEKLP-- 142 Query: 65 GDEVDVALDAVEDGFG--ETLLSREKAKRHEAWITLEKAY---EDAETVTGVINGKVKGG 119 +E +V + ++ ++SR+K E EK + ++ T+ + G Sbjct: 143 -EEFEVYILKLDKNRKIPNIVVSRKKVLEEEKQKKKEKLWSEIKEGMTIPAKVVKVQDNG 201 Query: 120 FTVELNGIR-AFLPGSLVDVRPVRDTLHL-EGKELEFKVIKLDQKRNNVVVSRRAVIESE 177 V + + FLP SL + L +G+E+E KV++ D ++ +++S +A+ E+ Sbjct: 202 AVVIIGDLIYGFLPASLYSWYREKSIKDLQKGQEIEAKVVQKDTEKQKLILSTKALEENP 261 Query: 178 NSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNV 237 EG V ++K + YG V + + G +H ++ + Sbjct: 262 WEKFP------YSEGDIVTTVIKEINPYGLVVKVENLQGFIHKSETDHLHPERFKSKFKE 315 Query: 238 GDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLT 288 G E+ K+++ DRE ++ L +KQ E+P K +PEG +T ++ N+ Sbjct: 316 GQEVQAKIIELDRENQKLKLSIKQATENPLDKFLKEHPEGETITAKIKNIK 366 >UniRef50_B9MRX3 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MRX3_ANATD Length = 663 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 84/378 (22%), Positives = 172/378 (45%), Gaps = 11/378 (2%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK---NAQGE 59 + F +L + S + + G +V G ++ +++D +LVD G K+E I ++ N + Sbjct: 289 KDFERLIDRSF--LTVQRGEVVNGRIIKVEEDYLLVDIGYKAEGIIYKDEVIKNGNVNLK 346 Query: 60 LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGG 119 ++G+ ++ + D G +LS+ +A + L YE+ ETV ++ + Sbjct: 347 DLFKIGEVIEAVVIKESDEEGNVVLSKYRADILHGFEELLSKYENKETVRVIVKSIKEKS 406 Query: 120 FTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 + G ++P S GK E ++ + +++ SR+++++ Sbjct: 407 IVCDFRGTNVYVPISQWGEDV---QTSDIGKIFEIEITDVSKEKKIAFGSRKSLLKQREE 463 Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAW-KRVKHPSEIVNVG 238 + + +L E +G V + + G V+ + G + +++ + K+ ++ +G Sbjct: 464 ERFIKQINSLDFSREYEGTVVEIREKGIVVNFENLRGFVPASEIGYLKKGAGIKKLFELG 523 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI-E 297 +++ VK+L D+ + ++ L +K+ +D W+ K G + VT + +G V I E Sbjct: 524 EKVKVKILDIDKNKKQIYLSVKKTQDDEWIKKIKNLYLGMLVDCEVTKVLPFGLVVWITE 583 Query: 298 EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQF 357 V+G VHVS + N P + VGD + V++IDEE+RRI+L LK Sbjct: 584 HDVDGFVHVSNIPLGY-NQRPHNLYKVGDSLRAKVIEIDEEKRRIALSLKDLHEEENIDT 642 Query: 358 AETHNKGDRVEGKIKSIT 375 + + +K+I Sbjct: 643 EHNEDFVITLADFVKNIK 660 Score = 168 bits (425), Expect = 7e-40, Method: Composition-based stats. Identities = 70/352 (19%), Positives = 150/352 (42%), Gaps = 17/352 (4%) Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEI 241 D+ +Q G V G + + + VD+G +G+++ ++ + ++ +G+ I Sbjct: 296 DRSFLTVQRGEVVNGRIIKVEEDYLLVDIGYKAEGIIYKDEVIKNGNVNLKDLFKIGEVI 355 Query: 242 TVKVLKFDRERTRVSLG-LKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV 300 V+K E V L + + + +Y + V ++ + + G Sbjct: 356 EAVVIKESDEEGNVVLSKYRADILHGFEELLSKYENKETVRVIVKSIKEKSIVCDF-RGT 414 Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERR-----RISLGLKQCKANPWQ 355 V +S+ + K+ E+ + D+ +E++ R SL LKQ + + Sbjct: 415 NVYVPISQWGEDVQTSDIGKIF------EIEITDVSKEKKIAFGSRKSL-LKQREEERFI 467 Query: 356 QFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEI 415 + + + EG + I + GI + + + G V S+I + G + ++ G+++ Sbjct: 468 KQINSLDFSREYEGTVVEIREKGIVVNFE-NLRGFVPASEIGYLKKGAGIKKLFELGEKV 526 Query: 416 AAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELAD-GV 474 +L +D +++I L VK+ +D + + G +V +VT V G V + + V Sbjct: 527 KVKILDIDKNKKQIYLSVKKTQDDEWIKKIKNLYLGMLVDCEVTKVLPFGLVVWITEHDV 586 Query: 475 EGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEAD 526 +G++ S + + VGD + AK +D + R I+LS++ E + Sbjct: 587 DGFVHVSNIPLGYNQRPHNLYKVGDSLRAKVIEIDEEKRRIALSLKDLHEEE 638 Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 50/266 (18%), Positives = 106/266 (39%), Gaps = 15/266 (5%) Query: 275 PEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLD 334 G + GR+ + + V+I EG+++ E+ N N++ + +G+V+E +V+ Sbjct: 303 QRGEVVNGRIIKVEEDYLLVDIGYKAEGIIYKDEV-IKNGNVNLKDLFKIGEVIEAVVIK 361 Query: 335 IDEERRRISLG-LKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHL 393 +E + L + + +++ + + V +KSI + I G + V + Sbjct: 362 ESDEEGNVVLSKYRADILHGFEELLSKYENKETVRVIVKSIKEKSIVCDF-RGTNVYVPI 420 Query: 394 SDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLG----VKQLAEDPFNNWVALNK 449 S +V + G + V E++ +KQ E+ F + Sbjct: 421 SQWGEDVQTSD------IGKIFEIEITDVSKEKKIAFGSRKSLLKQREEERFIKQINSLD 474 Query: 450 KGAIVTGKVTAVDAKGATVELADGVEGYLRASEAS-RDRVEDATLVLSVGDEVEAKFTGV 508 G V + KG V + + G++ ASE + + +G++V+ K + Sbjct: 475 FSREYEGTVVEIREKGIVVNF-ENLRGFVPASEIGYLKKGAGIKKLFELGEKVKVKILDI 533 Query: 509 DRKNRAISLSVRAKDEADEKDAIATV 534 D+ + I LSV+ + + I + Sbjct: 534 DKNKKQIYLSVKKTQDDEWIKKIKNL 559 >UniRef50_B9L9K6 30S ribosomal protein S1 n=2 Tax=Nautiliaceae RepID=B9L9K6_NAUPA Length = 386 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 103/411 (25%), Positives = 199/411 (48%), Gaps = 33/411 (8%) Query: 105 AETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRN 164 + V I +KGGF ++G FLP SL + ++ + GK ++ V + K+N Sbjct: 7 GDVVEFKIEKLIKGGFVGYVDGQEIFLPKSLSGL---KEDESVIGKTVKAYVKEF--KQN 61 Query: 165 NVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMA 224 +VVV R+A + + + + +V + G +D+ G+ G + ++ Sbjct: 62 SVVVDRKAYLNDIKAKLES------KADEVIDAVVTKVKPKGIVIDVDGISGFVPKEEIF 115 Query: 225 WKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRV 284 +K++ H + ++ GDE+ VK++ + R +K+ +PW + + G + V Sbjct: 116 YKKIDH-RQYISEGDEVQVKLI----DPVRRIFSIKKTLPNPWEEVKELN-IGDVVKVSV 169 Query: 285 TNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISL 344 +++TDYG FV++ GVEG +H+SE++W N + +GD +EV +++I+ E ++ + Sbjct: 170 SHITDYGAFVDLGNGVEGFLHISEINWDGIN-----DLTLGDEIEVEIVEINPEEEKLRV 224 Query: 345 GLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEE 404 K P F E HN GD VEG I + G F+ +D GI L+ + + GE+ Sbjct: 225 SRKNLLTKPAVIFNENHNVGDIVEGVITKFINVGAFVEID-GISTLLP-NKFASFKKGEK 282 Query: 405 AVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAK 464 A + GD++ ++ + E ++ + K +P++++ ++ G V GKV + Sbjct: 283 ANEIFNIGDKLEFKIITISPEENKVIVSRKDAMPNPYDSFAQTHQVGDEVEGKVKYITDF 342 Query: 465 GATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAI 515 G ++L D +E + R ED ++GDE + K ++ + + Sbjct: 343 GMFIDLGD-IEALV--------RKEDFNNEYNIGDEFKGKIIEINGERVKL 384 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 110/415 (26%), Positives = 193/415 (46%), Gaps = 33/415 (7%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVE 76 E + G +V + + K + + E +P + E E +G V + + Sbjct: 3 ELKVGDVVEFKIEKLIKGGFVGYVDGQ-EIFLPKS--LSGLKEDESVIGKTVKAYVKEFK 59 Query: 77 DGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLV 136 +++ KA ++ LE + E + V+ G ++++GI F+P + Sbjct: 60 Q---NSVVVDRKAYLNDIKAKLES--KADEVIDAVVTKVKPKGIVIDVDGISGFVPKEEI 114 Query: 137 DVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVK 196 + + D + E +V +D RR + + ++ L G VK Sbjct: 115 FYKKI-DHRQYISEGDEVQVKLIDP-------VRRIFSIKKTLPNPWEEVKELNIGDVVK 166 Query: 197 GIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRV 255 V ++TDYGAFVDLG GV+G LHI+++ W + + +GDEI V++++ + E ++ Sbjct: 167 VSVSHITDYGAFVDLGNGVEGFLHISEINWDGIND----LTLGDEIEVEIVEINPEEEKL 222 Query: 256 SLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKN 315 + K L P V + + G + G +T + G FVEI +G+ L+ K Sbjct: 223 RVSRKNLLTKPAVIFNENHNVGDIVEGVITKFINVGAFVEI-DGISTLLPNKFAS-FKKG 280 Query: 316 IHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSIT 375 +++ N+GD +E ++ I E ++ + K NP+ FA+TH GD VEGK+K IT Sbjct: 281 EKANEIFNIGDKLEFKIITISPEENKVIVSRKDAMPNPYDSFAQTHQVGDEVEGKVKYIT 340 Query: 376 DFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERIS 430 DFG+FI L G I+ LV E+ EY GDE +++++ ER +++ Sbjct: 341 DFGMFIDL-GDIEALV---------RKEDFNNEYNIGDEFKGKIIEINGERVKLA 385 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 83/356 (23%), Positives = 154/356 (43%), Gaps = 23/356 (6%) Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKV 245 + L+ G V+ ++ L G + G + L + K + +G + V Sbjct: 1 MSELKVGDVVEFKIEKLIKGGFVGYVDGQEIFLPKSLSGLKEDESV-----IGKTVKAYV 55 Query: 246 LKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVH 305 +F ++ V + K D + + VT + G +++ +G+ G V Sbjct: 56 KEF--KQNSVVVDRKAYLND--IKAKLESKADEVIDAVVTKVKPKGIVIDV-DGISGFVP 110 Query: 306 VSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGD 365 E+ K I + ++ GD V+V + ID RR +K+ NPW++ E N GD Sbjct: 111 KEEI--FYKKIDHRQYISEGDEVQVKL--IDPVRR--IFSIKKTLPNPWEEVKE-LNIGD 163 Query: 366 RVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAE 425 V+ + ITD+G F+ L G++G +H+S+I+W+ + GDEI +++++ E Sbjct: 164 VVKVSVSHITDYGAFVDLGNGVEGFLHISEINWDGIND-----LTLGDEIEVEIVEINPE 218 Query: 426 RERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASR 485 E++ + K L P + + G IV G +T GA VE+ DG+ L AS Sbjct: 219 EEKLRVSRKNLLTKPAVIFNENHNVGDIVEGVITKFINVGAFVEI-DGISTLLPNKFASF 277 Query: 486 DRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDAN 541 + E A + ++GD++E K + + + +S + T ++ Sbjct: 278 KKGEKANEIFNIGDKLEFKIITISPEENKVIVSRKDAMPNPYDSFAQTHQVGDEVE 333 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 74/341 (21%), Positives = 158/341 (46%), Gaps = 26/341 (7%) Query: 6 AQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQ--FKNAQGELEIQ 63 + ++E++ ++ VV + +++D S +P E+ +K I Sbjct: 68 KAYLNDIKAKLESKADEVIDAVVTKVKPKGIVIDVDGIS-GFVPKEEIFYKKIDHRQYIS 126 Query: 64 VGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVE 123 GDEV V L + S +K W +++ + V ++ G V+ Sbjct: 127 EGDEVQVKLIDPV----RRIFSIKK-TLPNPWEEVKE-LNIGDVVKVSVSHITDYGAFVD 180 Query: 124 L-NGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 L NG+ FL S ++ + D G E+E ++++++ + + VSR+ ++ Sbjct: 181 LGNGVEGFLHISEINWDGINDLT--LGDEIEVEIVEINPEEEKLRVSRKNLLTKPAVI-- 236 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 EN G V+G++ + GAFV++ G+ LL ++K+ + +EI N+GD++ Sbjct: 237 --FNENHNVGDIVEGVITKFINVGAFVEIDGISTLLPNKFASFKKGEKANEIFNIGDKLE 294 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 K++ E +V + K +P+ + A+ + G ++ G+V +TD+G F+++ + +E Sbjct: 295 FKIITISPEENKVIVSRKDAMPNPYDSFAQTHQVGDEVEGKVKYITDFGMFIDLGD-IEA 353 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRIS 343 LV + + N+GD + +++I+ ER +++ Sbjct: 354 LV---------RKEDFNNEYNIGDEFKGKIIEINGERVKLA 385 >UniRef50_A2R624 Function: RRP5 is required for formation of both 18S and 5. 8S rRNA in yeast n=24 Tax=Leotiomyceta RepID=A2R624_ASPNC Length = 1822 Score = 227 bits (579), Expect = 9e-58, Method: Composition-based stats. Identities = 115/571 (20%), Positives = 220/571 (38%), Gaps = 70/571 (12%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE---IQVGDEVDVALD 73 + + G+ V G + I + V V+ +P + + G V + Sbjct: 836 DLKEGADVTGFIRNITMNGVFVEFLGGVIGLVPKRLVGDENVNKPDYGMARGQVVTATVH 895 Query: 74 AVEDGFGETLLSREKAKRHEA---------------WITLEKAYEDAETVTGVIN-GKVK 117 +V+ F +LS A+ A + A ++ G+V Sbjct: 896 SVDADFQRFILSMNPAEATHAGAKKKAAAKPEPTPTDDAVANAIDEGIKSMSDFTFGRVT 955 Query: 118 GGFTVEL----------NGIRAFLPGSLV-----DVRPVRDTLHL--EGKELEFKVIKLD 160 V + + I+ + S V D++ + L + + +++ + Sbjct: 956 KCKIVSVRATQVNVQLADNIQGRIDVSEVFDKWEDIKDRKQPLRFFRPKQIISARILGIH 1015 Query: 161 --QKRNNVVVSRRAVIESENSAERDQL-----------LENLQEGMEVKGIVKNLTDYGA 207 + + +S R+ LE +Q G G V N+ D Sbjct: 1016 DARNHKFLPISHRSGKFPVFELSVKPSFLQAANPSPLNLEQVQVGSTWVGFVNNVADDCL 1075 Query: 208 FVDL-GGVDGLLHITDMAWKR--VKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGE 264 +++L V G L + D + + + VG + V V D ++ R+ L KQ + Sbjct: 1076 WINLSPNVRGRLRLMDASDDLSLLADVEKHYPVGSAMKVHVSAVDADKGRLDLSAKQRSD 1135 Query: 265 DPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNV 324 + + G L GRVT +T+ +++ + + G V + +M +P+ V Sbjct: 1136 ---KLVFEDVSVGMILPGRVTKVTERQVIMQLSKSIVGAVDLIDMADDYTKANPT-VCQK 1191 Query: 325 GDVVEVMVLDIDEERRRISLGLKQCK--------ANPWQQFAETHNKGDRVEGKIKSITD 376 +V+ V+ ID+ ++ISL L+ K + + D V G ++ + D Sbjct: 1192 NEVLRACVIAIDKANKKISLSLRPSKVLSSSLPVQDKEITSIKQLKVNDIVRGFVRRVAD 1251 Query: 377 FGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQL 436 G+F+ + + V +SD+S + +E ++ + V D+E+ ++ + +K+ Sbjct: 1252 NGLFVTVGRDVTAYVRISDLSDSYL-KEWKDSFQVDQLVKGRVTVSDSEQGKLQMSLKES 1310 Query: 437 AEDPFNNW---VALNKKGAIVTGKVTAVDAKGATVELAD--GVEGYLRASEASRDRVEDA 491 DP + K G +VTGKV V+ GA + + + G SE + +RVEDA Sbjct: 1311 VLDPNYKAPLTLHDLKPGQVVTGKVRKVEEFGAFIVIDGSKNISGLCHRSEMAENRVEDA 1370 Query: 492 TLVLSVGDEVEAKFTGVDRKNRAISLSVRAK 522 + GD V+AK +DRK IS ++A Sbjct: 1371 RTLYEEGDAVKAKILKIDRKQEKISFGLKAS 1401 Score = 197 bits (502), Expect = 8e-49, Method: Composition-based stats. Identities = 114/599 (19%), Positives = 218/599 (36%), Gaps = 69/599 (11%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA---QGELEIQVGDEVDVALD 73 E PG+ G ++ I +V +P + A ++G V+V Sbjct: 652 EITPGTQSPGTIIKIQPHGAVVQFYGPIRGFLPVSEMSEAYIKDPSQHFRLGQVVNVHAL 711 Query: 74 AVEDGFGETLLSREKAKRHEAWITLEKAYED---AETVTGVI--NGKVKGGFTVELNGIR 128 +V+ + +S + KA+E+ V+G + ++ G+ Sbjct: 712 SVDASREKLAVSCK--DPETFTEAYRKAFENIHPGMLVSGTVFEKSADDTLLKLDDYGLV 769 Query: 129 AFLPGSLV-DVRPVRDTLHL----EGKEL-EFKVIKLDQKRNNV-VVSRRAVIESENSAE 181 A L V D P + L G++L E VI + + + V R+++ ++ Sbjct: 770 ARLNVEHVADGSPSKQASTLSKIRVGQKLNELMVIDIQRAHRLIKVTGRQSLKKAAKHGS 829 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVD-LGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 +E+L+EG +V G ++N+T G FV+ LGGV GL+ + + V P + G Sbjct: 830 IPSEIEDLKEGADVTGFIRNITMNGVFVEFLGGVIGLVPKRLVGDENVNKPDYGMARGQV 889 Query: 241 ITVKVLKFDRERTRVSLGLKQLG---------------EDPWVAIAKRYPE--------- 276 +T V D + R L + P + Sbjct: 890 VTATVHSVDADFQRFILSMNPAEATHAGAKKKAAAKPEPTPTDDAVANAIDEGIKSMSDF 949 Query: 277 --GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIH----PSKVVNVGDVVEV 330 G ++ ++ V++ + ++G + VSE+ ++I P + ++ Sbjct: 950 TFGRVTKCKIVSVRATQVNVQLADNIQGRIDVSEVFDKWEDIKDRKQPLRFFRPKQIISA 1009 Query: 331 MVLDIDEERRR--------------ISLGLKQC---KANPWQQFAETHNKGDRVEGKIKS 373 +L I + R L +K ANP E G G + + Sbjct: 1010 RILGIHDARNHKFLPISHRSGKFPVFELSVKPSFLQAANPSPLNLEQVQVGSTWVGFVNN 1069 Query: 374 ITDFGIFIGLDGGIDGLVHLSDISWNVA-GEEAVREYKKGDEIAAVVLQVDAERERISLG 432 + D ++I L + G + L D S +++ + + Y G + V VDA++ R+ L Sbjct: 1070 VADDCLWINLSPNVRGRLRLMDASDDLSLLADVEKHYPVGSAMKVHVSAVDADKGRLDLS 1129 Query: 433 VKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDAT 492 KQ ++ G I+ G+VT V + ++L+ + G + + + D + Sbjct: 1130 AKQRSD---KLVFEDVSVGMILPGRVTKVTERQVIMQLSKSIVGAVDLIDMADDYTKANP 1186 Query: 493 LVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAF 551 V + + A +D+ N+ ISLS+R + N + F Sbjct: 1187 TVCQKNEVLRACVIAIDKANKKISLSLRPSKVLSSSLPVQDKEITSIKQLKVNDIVRGF 1245 Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats. Identities = 102/550 (18%), Positives = 205/550 (37%), Gaps = 63/550 (11%) Query: 25 RGVVVAIDKD-VVLVDAGL-KSESAIPAEQFKNAQGEL------EIQVGDEVDVALDAVE 76 VV ++ V V G K + + + Q E +V + + Sbjct: 475 EAKVVKVEPGLGVYVQIGSTKHLGFVHVSRLSDGQVETISPELGPFRVDSVHEGRVVGYS 534 Query: 77 DGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG-----GFTVEL-NGIRAF 130 LLS EK + ++ +E V G + + G G V L +GI Sbjct: 535 AIDNLYLLSFEKKVIDQPFLRVED-VTLGAVVKGKVEKLLIGANGVDGLIVALADGITGL 593 Query: 131 LPGSLVDVRPV--RDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLEN 188 +P P+ + EG + +++ ++ ++ + ++ + + + SA E Sbjct: 594 VPSMHFADTPLQFPEKKFHEGMTVSTRILSVNLEKRQIRLTLKKSLLNSESAIWKDY-EE 652 Query: 189 LQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLK 247 + G + G + + +GA V G + G L +++M+ +K PS+ +G + V L Sbjct: 653 ITPGTQSPGTIIKIQPHGAVVQFYGPIRGFLPVSEMSEAYIKDPSQHFRLGQVVNVHALS 712 Query: 248 FDRERTRVSLGLK--QLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE-GVEGLV 304 D R ++++ K + + + + G ++G V + +++++ G+ + Sbjct: 713 VDASREKLAVSCKDPETFTEAYRKAFENIHPGMLVSGTVFEKSADDTLLKLDDYGLVARL 772 Query: 305 HVSEMDWTNKNIHPSKV--VNVGDVV-EVMVLDIDEERRRISLGLKQCKANPWQQ----- 356 +V + + + S + + VG + E+MV+DI R I + +Q + Sbjct: 773 NVEHVADGSPSKQASTLSKIRVGQKLNELMVIDIQRAHRLIKVTGRQSLKKAAKHGSIPS 832 Query: 357 FAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIA 416 E +G V G I++IT G+F+ GG+ GLV + + + G + Sbjct: 833 EIEDLKEGADVTGFIRNITMNGVFVEFLGGVIGLVPKRLVGDENVNKPDYGMAR-GQVVT 891 Query: 417 AVVLQVDAERERISLGVKQLAE--------------------------DPFNNWVALNKK 450 A V VDA+ +R L + D ++ Sbjct: 892 ATVHSVDADFQRFILSMNPAEATHAGAKKKAAAKPEPTPTDDAVANAIDEGIKSMSDFTF 951 Query: 451 GAIVTGKVTAVDAKGATVELADGVEGYLRASEASR-----DRVEDATLVLSVGDEVEAKF 505 G + K+ +V A V+LAD ++G + SE + + A+ Sbjct: 952 GRVTKCKIVSVRATQVNVQLADNIQGRIDVSEVFDKWEDIKDRKQPLRFFRPKQIISARI 1011 Query: 506 TGV-DRKNRA 514 G+ D +N Sbjct: 1012 LGIHDARNHK 1021 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 92/448 (20%), Positives = 177/448 (39%), Gaps = 43/448 (9%) Query: 109 TGVINGKVKG-GFTVELNGIR--AFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKR-- 163 + G G V++ + F+ S + V G F+V + + R Sbjct: 475 EAKVVKVEPGLGVYVQIGSTKHLGFVHVSRLSDGQVETISPELG---PFRVDSVHEGRVV 531 Query: 164 --NNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNL-----TDYGAFVDL-GGVD 215 + + E + + +E++ G VKG V+ L G V L G+ Sbjct: 532 GYSAIDNLYLLSFEKKVIDQPFLRVEDVTLGAVVKGKVEKLLIGANGVDGLIVALADGIT 591 Query: 216 GLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYP 275 GL+ A ++ P + + G ++ ++L + E+ ++ L LK+ + AI K Y Sbjct: 592 GLVPSMHFADTPLQFPEKKFHEGMTVSTRILSVNLEKRQIRLTLKKSLLNSESAIWKDYE 651 Query: 276 E---GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMV 332 E GT+ G + + +G V+ + G + VSEM PS+ +G VV V Sbjct: 652 EITPGTQSPGTIIKIQPHGAVVQFYGPIRGFLPVSEMSEAY-IKDPSQHFRLGQVVNVHA 710 Query: 333 LDIDEERRRISLGLKQCKA--NPWQQFAETHNKGDRVEGKIK---------SITDFGIFI 381 L +D R ++++ K + +++ E + G V G + + D+G+ Sbjct: 711 LSVDASREKLAVSCKDPETFTEAYRKAFENIHPGMLVSGTVFEKSADDTLLKLDDYGLVA 770 Query: 382 GLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEI-AAVVLQVDAERERISL----GVKQL 436 L ++ H++D S + + + + G ++ +V+ + I + +K+ Sbjct: 771 RL--NVE---HVADGSPSKQA-STLSKIRVGQKLNELMVIDIQRAHRLIKVTGRQSLKKA 824 Query: 437 AED-PFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVL 495 A+ + + K+GA VTG + + G VE GV G + + V + Sbjct: 825 AKHGSIPSEIEDLKEGADVTGFIRNITMNGVFVEFLGGVIGLVPKRLVGDENVNKPDYGM 884 Query: 496 SVGDEVEAKFTGVDRKNRAISLSVRAKD 523 + G V A VD + LS+ + Sbjct: 885 ARGQVVTATVHSVDADFQRFILSMNPAE 912 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 86/575 (14%), Positives = 184/575 (32%), Gaps = 64/575 (11%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQV------ 64 E L PG++V G V +I+ + + +P E ++ Sbjct: 156 EGLNFKRIVPGTMVLGQVSSINAHDIGLSLPNNLTGYVPLTSVSKVLEEKIEKILKDDGS 215 Query: 65 --------------------GDEVDVALDAVEDGFGETLL-SREKAKRHEAWITLEKAYE 103 G + + + + SR++ + Sbjct: 216 DEEEDDDEDDSLDLHKYFYLGQYLRAYVVSAGSNAADASAKSRKRIELSVDPRQANSGLS 275 Query: 104 D-----AETVTGVINGKVKGGFTVELN----GIRAFLPGSLVDVRPVRDTLHLEGKELEF 154 V + G ++L ++ F+ VD + ++ EG Sbjct: 276 KSDLVVNSAVQASVVSVEDHGLVMDLGLEGGEVKGFMSSKEVDPKTQPSSIK-EGSVFLC 334 Query: 155 KVIKLDQKRNNVVVSRRA----VIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVD 210 V + + + +S I+ + + + G + ++ +++ G Sbjct: 335 MVTGQNANGSVIKLSANLPSAGSIKKSHYLSTAPTITSFLPGTAAEILLTDVSSTGMAGK 394 Query: 211 LGG-VDGLLHITDMAWKRVKH-PSEIVNVGDEITVKVLKF--DRERTRVSLGLK------ 260 + G +D + + K ++ + G +I +++ E +V L Sbjct: 395 IMGMLDATVDLVQSGGSSGKDDLTKKYSTGAKIKGRLVCTFPSAEPYKVGFSLLDHVAKF 454 Query: 261 QLGEDPWVAIAKRYPEGTKLTGRVTNLTDY-GCFVEIEEGVE-GLVHVSEMDWTNKNIHP 318 P + +V + G +V+I G VHVS + Sbjct: 455 ATEGGPGSSDDAPAISAIVPEAKVVKVEPGLGVYVQIGSTKHLGFVHVSRLSDGQVETIS 514 Query: 319 SKV--VNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITD 376 ++ V V E V+ L ++ + E G V+GK++ + Sbjct: 515 PELGPFRVDSVHEGRVVGYSAIDNLYLLSFEKKVIDQPFLRVEDVTLGAVVKGKVEKLLI 574 Query: 377 F-----GIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISL 431 G+ + L GI GLV S + + +++ +G ++ +L V+ E+ +I L Sbjct: 575 GANGVDGLIVALADGITGLVP-SMHFADTPLQFPEKKFHEGMTVSTRILSVNLEKRQIRL 633 Query: 432 GVKQL---AEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRV 488 +K+ +E G G + + GA V+ + G+L SE S + Sbjct: 634 TLKKSLLNSESAIWKDYEEITPGTQSPGTIIKIQPHGAVVQFYGPIRGFLPVSEMSEAYI 693 Query: 489 EDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKD 523 +D + +G V VD +++S + + Sbjct: 694 KDPSQHFRLGQVVNVHALSVDASREKLAVSCKDPE 728 Score = 41.5 bits (96), Expect = 0.082, Method: Composition-based stats. Identities = 12/80 (15%), Positives = 27/80 (33%), Gaps = 5/80 (6%) Query: 13 LKEIETRPGSIVRGVVVAIDKDVVLVDA-GLK-SESAIPAEQFKNAQGELE---IQVGDE 67 L + +PG +V G V +++ + G K + + E + GD Sbjct: 1320 LTLHDLKPGQVVTGKVRKVEEFGAFIVIDGSKNISGLCHRSEMAENRVEDARTLYEEGDA 1379 Query: 68 VDVALDAVEDGFGETLLSRE 87 V + ++ + + Sbjct: 1380 VKAKILKIDRKQEKISFGLK 1399 >UniRef50_B0SDD9 30S Ribosomal protein S1 n=6 Tax=Leptospira RepID=B0SDD9_LEPBA Length = 385 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 98/381 (25%), Positives = 179/381 (46%), Gaps = 16/381 (4%) Query: 2 TESFAQLFEESLKEIE-TRPGSIVRGVVVAIDKDVVLV-DAGLKSESAIPAEQFKNAQGE 59 + F +L EES K+ + PGS V A+ D V + K I E+++ + Sbjct: 5 SSEFDRLLEESFKKRQSIEPGSRHEAKVTAVKNDYVFIRTVENKVIGNISTEEWR---ED 61 Query: 60 LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGG 119 + ++GD + V G E LE A + V G + + GG Sbjct: 62 VLPKIGDHIVVYFLKENSGDFYFTTCLSADNLTE--ENLELANQFEIPVLGQMLQEGSGG 119 Query: 120 FTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 + V+L AF+P S +DV ++ GK ++F + +L +K+N +++S++ + + E Sbjct: 120 WDVKLGSYTAFVPFSQLDVSL--KGKNIGGKRIKFIISELGKKQNKILLSQKKIADKERE 177 Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGD 239 ++ L + L+ GM V VK++ +G VD+ G+D L+ ++ +K+ + VG+ Sbjct: 178 TKKQLLRDELKVGMFVSCNVKSIHKFGLIVDMDGLDALVPQSEATYKKNPDLTTEFRVGE 237 Query: 240 EITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEG 299 + K+L D ++SL +K DPW + E ++G V ++ +G FV + E Sbjct: 238 TLRAKILTLDWSTNKISLSVKDFLSDPWSG-KLPFKESDIVSGTVESIKPFGLFVRLGED 296 Query: 300 VEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGL-KQCKANPWQQFA 358 GLV E + + V G +EV VL+I+ E+R+I+L + K +A ++ Sbjct: 297 FSGLVPNKE-SGVPQRTPLNTVFQPGQKLEVFVLEINPEKRQIALSITKAAEAKDRMEYQ 355 Query: 359 ETHNKGDRVEGKIKSITDFGI 379 + +K D S++ FG+ Sbjct: 356 DYLSKDDAT----TSVSSFGL 372 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 75/386 (19%), Positives = 159/386 (41%), Gaps = 32/386 (8%) Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIV-NVG 238 E + ++++ G + V + + F+ V+ + I +++ + + +++ +G Sbjct: 13 EESFKKRQSIEPGSRHEAKVTAVKNDYVFIR--TVENKV-IGNISTEEWR--EDVLPKIG 67 Query: 239 DEITVKVLKFDRERTRVS--LGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLT----DYGC 292 D I V LK + + L L E + + V G Sbjct: 68 DHIVVYFLKENSGDFYFTTCLSADNLTE-------ENLELANQFEIPVLGQMLQEGSGGW 120 Query: 293 FVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN 352 V++ V S++D + K + G ++ ++ ++ +++ +I L K+ Sbjct: 121 DVKLGSYT-AFVPFSQLDVSLKGKNIG-----GKRIKFIISELGKKQNKILLSQKKIADK 174 Query: 353 PWQQFAE----THNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVRE 408 + + G V +KSI FG+ + +D G+D LV S+ ++ + E Sbjct: 175 ERETKKQLLRDELKVGMFVSCNVKSIHKFGLIVDMD-GLDALVPQSEATYK-KNPDLTTE 232 Query: 409 YKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATV 468 ++ G+ + A +L +D +ISL VK DP++ + K+ IV+G V ++ G V Sbjct: 233 FRVGETLRAKILTLDWSTNKISLSVKDFLSDPWSGKLP-FKESDIVSGTVESIKPFGLFV 291 Query: 469 ELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEK 528 L + G + E+ + V G ++E ++ + R I+LS+ EA ++ Sbjct: 292 RLGEDFSGLVPNKESGVPQRTPLNTVFQPGQKLEVFVLEINPEKRQIALSITKAAEAKDR 351 Query: 529 DAIATVNKQEDANFSNNAMAEAFKAA 554 ++DA S ++ A K + Sbjct: 352 MEYQDYLSKDDATTSVSSFGLALKQS 377 >UniRef50_A5V0B5 RNA binding S1 domain protein n=3 Tax=Chloroflexaceae RepID=A5V0B5_ROSS1 Length = 514 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 93/267 (34%), Positives = 145/267 (54%), Gaps = 19/267 (7%) Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDE 240 R + +++L GME++G V ++ YG FVD+G G DGL+HI++M+ R++ PS++V +GD Sbjct: 132 RPRRVKDLAPGMELEGRVTSIALYGIFVDIGVGRDGLVHISEMSDTRIESPSDLVKIGDT 191 Query: 241 ITVKVLKFDRERTRVSLGL--KQLGEDPWVAIAKRYPE-----------GTKLTGRVTNL 287 + V+V + + R+SL + K+ +P K+ PE G + G VT + Sbjct: 192 VKVRVKSVEPDGRRISLTMRTKERSAEPRSGRGKKKPEVDYEKLAALRVGDNVEGTVTGM 251 Query: 288 TDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLK 347 +G FV+I G +GLVHVSE+ + VV VG VL++D RISL L+ Sbjct: 252 APFGVFVDIGVGKDGLVHVSELAEG-RVEKAEDVVQVGQTYTFKVLEVDAAGARISLSLR 310 Query: 348 QCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVR 407 + + Q + KG +EG I + FG F+ + G DGLVH+S++S N Sbjct: 311 RAQ---RGQKLQQLEKGQILEGTISGLAPFGAFVDIGVGRDGLVHISELS-NTHVARVED 366 Query: 408 EYKKGDEIAAVVLQVDAERERISLGVK 434 K GD + VL VD + +RISL ++ Sbjct: 367 VVKVGDRVQVRVLDVDPQSKRISLSLR 393 Score = 218 bits (555), Expect = 6e-55, Method: Composition-based stats. Identities = 88/265 (33%), Positives = 138/265 (52%), Gaps = 18/265 (6%) Query: 272 KRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVM 331 K G +L GRVT++ YG FV+I G +GLVH+SEM T + PS +V +GD V+V Sbjct: 137 KDLAPGMELEGRVTSIALYGIFVDIGVGRDGLVHISEMSDT-RIESPSDLVKIGDTVKVR 195 Query: 332 VLDIDEERRRISLGLK-------------QCKANPWQQFAETHNKGDRVEGKIKSITDFG 378 V ++ + RRISL ++ + K + GD VEG + + FG Sbjct: 196 VKSVEPDGRRISLTMRTKERSAEPRSGRGKKKPEVDYEKLAALRVGDNVEGTVTGMAPFG 255 Query: 379 IFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAE 438 +F+ + G DGLVH+S+++ E+A + G VL+VDA RISL +++ Sbjct: 256 VFVDIGVGKDGLVHVSELAEGRV-EKAEDVVQVGQTYTFKVLEVDAAGARISLSLRRAQR 314 Query: 439 DPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVG 498 + +KG I+ G ++ + GA V++ G +G + SE S V V+ VG Sbjct: 315 ---GQKLQQLEKGQILEGTISGLAPFGAFVDIGVGRDGLVHISELSNTHVARVEDVVKVG 371 Query: 499 DEVEAKFTGVDRKNRAISLSVRAKD 523 D V+ + VD +++ ISLS+R +D Sbjct: 372 DRVQVRVLDVDPQSKRISLSLRLED 396 Score = 168 bits (425), Expect = 7e-40, Method: Composition-based stats. Identities = 66/263 (25%), Positives = 121/263 (46%), Gaps = 26/263 (9%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE---IQVGDEVDVALD 73 + PG + G V +I + VD G+ + + + + + E +++GD V V + Sbjct: 138 DLAPGMELEGRVTSIALYGIFVDIGVGRDGLVHISEMSDTRIESPSDLVKIGDTVKVRVK 197 Query: 74 AVEDGFGETLLSRE--------KAKRHEAWITLEK----AYEDAETVTGVINGKVKGGFT 121 +VE L+ ++ R + ++ A + V G + G G Sbjct: 198 SVEPDGRRISLTMRTKERSAEPRSGRGKKKPEVDYEKLAALRVGDNVEGTVTGMAPFGVF 257 Query: 122 VELN-GIRAFLPGSLVDVRPVRDTLHLE--GKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 V++ G + S + V + G+ FKV+++D + +S R Sbjct: 258 VDIGVGKDGLVHVSELAEGRVEKAEDVVQVGQTYTFKVLEVDAAGARISLSLR------- 310 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNV 237 A+R Q L+ L++G ++G + L +GAFVD+G G DGL+HI++++ V ++V V Sbjct: 311 RAQRGQKLQQLEKGQILEGTISGLAPFGAFVDIGVGRDGLVHISELSNTHVARVEDVVKV 370 Query: 238 GDEITVKVLKFDRERTRVSLGLK 260 GD + V+VL D + R+SL L+ Sbjct: 371 GDRVQVRVLDVDPQSKRISLSLR 393 Score = 141 bits (355), Expect = 8e-32, Method: Composition-based stats. Identities = 56/203 (27%), Positives = 87/203 (42%), Gaps = 14/203 (6%) Query: 359 ETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAV 418 + G +EG++ SI +GIF+ + G DGLVH+S++S + E K GD + Sbjct: 137 KDLAPGMELEGRVTSIALYGIFVDIGVGRDGLVHISEMS-DTRIESPSDLVKIGDTVKVR 195 Query: 419 VLQVDAERERISLGV--KQLAEDPFN-----------NWVALNKKGAIVTGKVTAVDAKG 465 V V+ + RISL + K+ + +P + +A + G V G VT + G Sbjct: 196 VKSVEPDGRRISLTMRTKERSAEPRSGRGKKKPEVDYEKLAALRVGDNVEGTVTGMAPFG 255 Query: 466 ATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEA 525 V++ G +G + SE + RVE A V+ VG K VD ISLS+R Sbjct: 256 VFVDIGVGKDGLVHVSELAEGRVEKAEDVVQVGQTYTFKVLEVDAAGARISLSLRRAQRG 315 Query: 526 DEKDAIATVNKQEDANFSNNAMA 548 + + E Sbjct: 316 QKLQQLEKGQILEGTISGLAPFG 338 Score = 86.5 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 50/103 (48%) Query: 445 VALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAK 504 V G + G+VT++ G V++ G +G + SE S R+E + ++ +GD V+ + Sbjct: 136 VKDLAPGMELEGRVTSIALYGIFVDIGVGRDGLVHISEMSDTRIESPSDLVKIGDTVKVR 195 Query: 505 FTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAM 547 V+ R ISL++R K+ + E + K E A+ Sbjct: 196 VKSVEPDGRRISLTMRTKERSAEPRSGRGKKKPEVDYEKLAAL 238 Score = 85.4 bits (210), Expect = 6e-15, Method: Composition-based stats. Identities = 36/168 (21%), Positives = 65/168 (38%), Gaps = 12/168 (7%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQGELEIQVGDE 67 + K R G V G V + V VD G+ + + + + E +QVG Sbjct: 231 DYEKLAALRVGDNVEGTVTGMAPFGVFVDIGVGKDGLVHVSELAEGRVEKAEDVVQVGQT 290 Query: 68 VDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-G 126 + V+ LS +A+R + L E + + G I+G G V++ G Sbjct: 291 YTFKVLEVDAAGARISLSLRRAQRGQKLQQL----EKGQILEGTISGLAPFGAFVDIGVG 346 Query: 127 IRAFLPGSLVD---VRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRR 171 + S + V V D + G ++ +V+ +D + + +S R Sbjct: 347 RDGLVHISELSNTHVARVEDVVK-VGDRVQVRVLDVDPQSKRISLSLR 393 >UniRef50_C9SZ75 rRNA biogenesis protein RRP5 n=5 Tax=Sordariomycetes RepID=C9SZ75_VERA1 Length = 1789 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 111/565 (19%), Positives = 218/565 (38%), Gaps = 59/565 (10%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE---IQVGDEVDVALD 73 + + G+ V G + +I VLV G + + E E ++ + V + Sbjct: 816 DAKVGAEVPGFISSIRPGAVLVRFGGNLVGVMFKTRLPVEDQEKEGFGLRKDQSITVRIR 875 Query: 74 AVEDGFGETLL-----------SREKAKRHEAWITLEKAYED---AETVTGVINGKVKGG 119 A++ ++ + K ++ A +D + V I G Sbjct: 876 AIDLERTRLVVDPLTAELPSNEVKPKKEKESARPQAHGPVQDITFGQIVEAKIVGIHDTQ 935 Query: 120 FTVE-LNGIRAFLPGSLVDVR--PVRDTLHL-----EGKELEFKVIKLD--QKRNNVVVS 169 VE + ++ + S + ++D +G + + I L + + S Sbjct: 936 LNVETADKVQGRVDISQIFDSWDKIKDPEEPLSQFKKGDTVRVRAIGLHDSKDHRFLAFS 995 Query: 170 RR----------AVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLL 218 R + E + LE+L+ G V N + G + ++ V G + Sbjct: 996 HRSYNSVLEFTAKASDIEADVLKPLSLEDLEVGSTHVAFVNNASRNGLWANISPVVRGRI 1055 Query: 219 HITDMAWK--RVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPE 276 + D++ ++ +G + V+V+ D +R + L + + Sbjct: 1056 NAMDVSDDTSKINDVINNFPIGTALKVRVIAVDAKRGVLDLSAR--SDSSAAVTWDSIKP 1113 Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDID 336 L G V + + V++ V G VH+ +M +++ K + GD ++V V+++D Sbjct: 1114 NQVLAGCVVKVNERQIMVKLGSNVAGHVHLVDMSDDFGDVNTLK-YDEGDAIQVSVVEVD 1172 Query: 337 EERRRISLGLKQCKA--------NPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGID 388 + +R+ L + + + + G V G +K + D G+F+ L G + Sbjct: 1173 KSNKRVRLSTRPSRVLNSSSPITDSEITSVKQVVSGSTVRGFVKHVADKGVFVLLGGSVS 1232 Query: 389 GLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAED----PFNNW 444 LV +S++S + +E ++ + VL VD ++ L +K D P + Sbjct: 1233 ALVKISNLS-DRFLKEWKEHFQVDQLVKGRVLSVDEGAGQVELSLKSSVVDDNYKPLKTY 1291 Query: 445 VALNKKGAIVTGKVTAVDAKGAT--VELADGVEGYLRASEASRDRVEDATLVLSVGDEVE 502 + K IVTGK+ V+ GA V+ +D V G SE + VEDA + GD V+ Sbjct: 1292 KDI-KPNQIVTGKIRKVEDFGAFIVVDGSDNVSGLCHRSEMADSPVEDARKLYQAGDVVK 1350 Query: 503 AKFTGVDRKNRAISLSVRAKDEADE 527 AK +DR + IS ++ ++ Sbjct: 1351 AKVLTLDRNKKRISFGLKPAYFDED 1375 Score = 197 bits (502), Expect = 6e-49, Method: Composition-based stats. Identities = 103/584 (17%), Positives = 204/584 (34%), Gaps = 60/584 (10%) Query: 9 FEESLKEIETRPGSIVRGVVVAIDKDVVLVDA-GLKSESAIPAEQFKNAQGELE------ 61 ++ GSIV G V+ D V V+ G ++ +P Q + Sbjct: 712 LDKQAALKALSVGSIVSGKVIQKSDDDVHVELDGSNLKAILPLGQLTDKSANKSQSALKR 771 Query: 62 IQVGDEV-DVALDAVEDGFGETLLSREKAKRHEAW-ITLEKAYEDAET---VTGVINGKV 116 I +G + D+ + + LS + + L + Y DA+ V G I+ Sbjct: 772 IHMGQTLTDLLVLDKNERRRAITLSSKPSLVEAGKTDKLIRTYADAKVGAEVPGFISSIR 831 Query: 117 KGGFTVELNG-IRAFLPGSLVDVRPVRDTLH--LEGKELEFKVIKLDQKRNNVVVSRRAV 173 G V G + + + + V + + + ++ +D +R +VV Sbjct: 832 PGAVLVRFGGNLVGVMFKTRLPVEDQEKEGFGLRKDQSITVRIRAIDLERTRLVVDPLTA 891 Query: 174 IESENSAERDQ-----------LLENLQEGMEVKGIVKNLTDYGAFVD-LGGVDGLLHIT 221 N + + ++++ G V+ + + D V+ V G + I+ Sbjct: 892 ELPSNEVKPKKEKESARPQAHGPVQDITFGQIVEAKIVGIHDTQLNVETADKVQGRVDIS 951 Query: 222 DM--AWKRVKHPSE---IVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIA----- 271 + +W ++K P E GD + V+ + + L + + Sbjct: 952 QIFDSWDKIKDPEEPLSQFKKGDTVRVRAIGLHDSKDHRFLAFSHRSYNSVLEFTAKASD 1011 Query: 272 -----------KRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDW-TNKNIHPS 319 + G+ V N + G + I V G ++ ++ T+K Sbjct: 1012 IEADVLKPLSLEDLEVGSTHVAFVNNASRNGLWANISPVVRGRINAMDVSDDTSKINDVI 1071 Query: 320 KVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGI 379 +G ++V V+ +D +R + L + + ++ + G + + + I Sbjct: 1072 NNFPIGTALKVRVIAVDAKRGVLDLSAR--SDSSAAVTWDSIKPNQVLAGCVVKVNERQI 1129 Query: 380 FIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLA-- 437 + L + G VHL D+S + ++ Y +GD I V++VD +R+ L + Sbjct: 1130 MVKLGSNVAGHVHLVDMSDDFGDVNTLK-YDEGDAIQVSVVEVDKSNKRVRLSTRPSRVL 1188 Query: 438 ------EDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDA 491 D V G+ V G V V KG V L V ++ S S +++ Sbjct: 1189 NSSSPITDSEITSVKQVVSGSTVRGFVKHVADKGVFVLLGGSVSALVKISNLSDRFLKEW 1248 Query: 492 TLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVN 535 V V+ + VD + LS+++ D + T Sbjct: 1249 KEHFQVDQLVKGRVLSVDEGAGQVELSLKSSVVDDNYKPLKTYK 1292 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 104/585 (17%), Positives = 213/585 (36%), Gaps = 52/585 (8%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA---QGELEIQVGDEVDVALD 73 E G G + I ++ +P Q A + +VG V+V + Sbjct: 632 EVEVGQQALGTISDISPHGARIEFYKGVRGWLPVSQMSEAFIQDPKEHFKVGQVVNVHIL 691 Query: 74 AVEDGFGETLLS-REKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNG--IRAF 130 V+ + L+S ++ + KA V+G + K VEL+G ++A Sbjct: 692 EVDPENQKLLVSCKDPSAFGLDKQAALKALSVGSIVSGKVIQKSDDDVHVELDGSNLKAI 751 Query: 131 LPGSLVDVRPVRDTLH-----LEGKEL-EFKVIKLDQKRNNVVVSRR-AVIESENSAERD 183 LP + + + G+ L + V+ +++R + +S + +++E+ + + Sbjct: 752 LPLGQLTDKSANKSQSALKRIHMGQTLTDLLVLDKNERRRAITLSSKPSLVEAGKTDKLI 811 Query: 184 QLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 + + + G EV G + ++ V GG + G++ T + + + + IT Sbjct: 812 RTYADAKVGAEVPGFISSIRPGAVLVRFGGNLVGVMFKTRLPVEDQEKEGFGLRKDQSIT 871 Query: 243 VKVLKFDRERTRVSL----------GLKQLGEDPWVAIAKRYPE-----GTKLTGRVTNL 287 V++ D ERTR+ + +K E P G + ++ + Sbjct: 872 VRIRAIDLERTRLVVDPLTAELPSNEVKPKKEKESARPQAHGPVQDITFGQIVEAKIVGI 931 Query: 288 TDYGCFVEIEEGVEGLVHVSEMDWT-NKNIHPSK---VVNVGDVVEVMVLDI-DEERRR- 341 D VE + V+G V +S++ + +K P + GD V V + + D + R Sbjct: 932 HDTQLNVETADKVQGRVDISQIFDSWDKIKDPEEPLSQFKKGDTVRVRAIGLHDSKDHRF 991 Query: 342 -----------ISLGLKQCKANPWQQFA---ETHNKGDRVEGKIKSITDFGIFIGLDGGI 387 + K E G + + + G++ + + Sbjct: 992 LAFSHRSYNSVLEFTAKASDIEADVLKPLSLEDLEVGSTHVAFVNNASRNGLWANISPVV 1051 Query: 388 DGLVHLSDISWNV-AGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVA 446 G ++ D+S + + + + G + V+ VDA+R + L + ++ Sbjct: 1052 RGRINAMDVSDDTSKINDVINNFPIGTALKVRVIAVDAKRGVLDLSAR--SDSSAAVTWD 1109 Query: 447 LNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFT 506 K ++ G V V+ + V+L V G++ + S D + TL GD ++ Sbjct: 1110 SIKPNQVLAGCVVKVNERQIMVKLGSNVAGHVHLVDMSDDFGDVNTLKYDEGDAIQVSVV 1169 Query: 507 GVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAF 551 VD+ N+ + LS R + I + + F Sbjct: 1170 EVDKSNKRVRLSTRPSRVLNSSSPITDSEITSVKQVVSGSTVRGF 1214 Score = 168 bits (426), Expect = 5e-40, Method: Composition-based stats. Identities = 102/576 (17%), Positives = 185/576 (32%), Gaps = 73/576 (12%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA-------------- 56 E+L GS+V G V AI + + + N Sbjct: 137 EALNYKRLAKGSVVLGQVSAISHHNITIALPNNLSGNVSIAAISNVVTAKIQQAAEASDD 196 Query: 57 -------------QGELEIQVGDEVDVALDAVEDGFGE-----TLLSREKAKRHEAWITL 98 + +VG V + + ++G G LS + Sbjct: 197 DDSADENDDDDDIELNSLFEVGQYVRAYVLSTKEGEGSGKKNHIELSLRPEDANSGMSKN 256 Query: 99 EKAYEDAETVTGVINGKVKGGFTVELN----GIRAFLPGSLVDVRPVRDTLHLEGKELEF 154 + TV + G+ +EL ++ FLP V V + G Sbjct: 257 DVVA--NATVMAAVTSVQDHGYEMELGVDNKKLKGFLPKKDVG-SEVDELRLQPGAVSLC 313 Query: 155 KVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV 214 V + K + + + +++N A + Q G V +V + T G LG + Sbjct: 314 LVKSVSGKIAQLCLDSEKLGKADNIATEATTVNTFQPGTVVDVLVTSTTGRGL---LGKI 370 Query: 215 DGLLHIT-DMAWKRVK----HPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVA 269 G L +T D+ VG + +V+ LG+ L + Sbjct: 371 LGHLPVTADLIHSGAGPDAVDLDAKYKVGSRVKARVICTFPNAKNPKLGISLLPHIIKLQ 430 Query: 270 IAKRYPEGT-------------KLTGRVTNLTDY-GCFVEIE-EGVEGLVHVSEMDWTNK 314 K G V + G +V++ G+ G VH+S++ Sbjct: 431 AKKAGKGGQAKPPLNVLPIAVRVDKCIVRKVEPEIGLYVDVGVAGLSGFVHISKVKDGKV 490 Query: 315 NI--HPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIK 372 S G V V+ + + E G+ V I+ Sbjct: 491 EALYESSGPFKEGSVHRGRVIGYSAFDGMYLMTFEPTIIEQQFIRLEDVPAGEIVSCTIE 550 Query: 373 SITDFGIFI-----GLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERE 427 + G + + GI G VH + + +V + +++++G + A VL V + Sbjct: 551 KVVVGGQGVSGLVVKVAEGITGYVHETHFA-DVRLQHPEKKFREGMTVKARVLSVRPRKR 609 Query: 428 RISLGVKQLAED---PFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEAS 484 ++ L +K+ + P + G G ++ + GA +E GV G+L S+ S Sbjct: 610 QMRLTLKKTLVNSDTPIIKSFDEVEVGQQALGTISDISPHGARIEFYKGVRGWLPVSQMS 669 Query: 485 RDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 ++D VG V VD +N+ + +S + Sbjct: 670 EAFIQDPKEHFKVGQVVNVHILEVDPENQKLLVSCK 705 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 86/368 (23%), Positives = 151/368 (41%), Gaps = 26/368 (7%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE-----IQVGDEVDVA 71 + GS V ++ + + I A + ++ +G + V Sbjct: 1024 DLEVGSTHVAFVNNASRNGLWANISPVVRGRINAMDVSDDTSKINDVINNFPIGTALKVR 1083 Query: 72 LDAVEDGFGETLLS-REKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRA- 129 + AV+ G LS R + W +++ + + G + + V+L A Sbjct: 1084 VIAVDAKRGVLDLSARSDSSAAVTWDSIKP----NQVLAGCVVKVNERQIMVKLGSNVAG 1139 Query: 130 ---FLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRA--VIESENSAERDQ 184 + S D V + EG ++ V+++D+ V +S R V+ S + + Sbjct: 1140 HVHLVDMSD-DFGDVNTLKYDEGDAIQVSVVEVDKSNKRVRLSTRPSRVLNSSSPITDSE 1198 Query: 185 L--LENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEI 241 + ++ + G V+G VK++ D G FV LGG V L+ I++++ + +K E V + Sbjct: 1199 ITSVKQVVSGSTVRGFVKHVADKGVFVLLGGSVSALVKISNLSDRFLKEWKEHFQVDQLV 1258 Query: 242 TVKVLKFDRERTRVSLGLKQLGED---PWVAIAKRYPEGTKLTGRVTNLTDYGCF--VEI 296 +VL D +V L LK D + K +TG++ + D+G F V+ Sbjct: 1259 KGRVLSVDEGAGQVELSLKSSVVDDNYKPLKTYKDIKPNQIVTGKIRKVEDFGAFIVVDG 1318 Query: 297 EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQ 356 + V GL H SEM + K+ GDVV+ VL +D ++RIS GLK + Sbjct: 1319 SDNVSGLCHRSEMADS-PVEDARKLYQAGDVVKAKVLTLDRNKKRISFGLKPAYFDEDVD 1377 Query: 357 FAETHNKG 364 E G Sbjct: 1378 MDEGEGAG 1385 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 61/438 (13%), Positives = 152/438 (34%), Gaps = 33/438 (7%) Query: 143 DTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNL 202 ++L G+ + V+ + + + + A ++ V V ++ Sbjct: 212 NSLFEVGQYVRAYVLSTKEGEGSGKKNHIELSLRPEDANSGMSKNDVVANATVMAAVTSV 271 Query: 203 TDYGAFVDLG----GVDGLLHI----TDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTR 254 D+G ++LG + G L +++ R++ + + + ++ K+ + + + Sbjct: 272 QDHGYEMELGVDNKKLKGFLPKKDVGSEVDELRLQPGAVSLCLVKSVSGKIAQLCLDSEK 331 Query: 255 VSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNK 314 + K + GT + VT+ T G +I + + Sbjct: 332 LG---KADNIATEATTVNTFQPGTVVDVLVTSTTGRGLLGKILGHLPVTADLIHSGAGPD 388 Query: 315 NIHPSKVVNVGDVVEVMVLDIDEERR--RISLGL----------KQCKANPWQQFAETHN 362 + VG V+ V+ + ++ + L K K + Sbjct: 389 AVDLDAKYKVGSRVKARVICTFPNAKNPKLGISLLPHIIKLQAKKAGKGGQAKPPLNVLP 448 Query: 363 KGDRVE-GKIKSITD-FGIFIGLD-GGIDGLVHLSDISWNVAGE--EAVREYKKGDEIAA 417 RV+ ++ + G+++ + G+ G VH+S + E+ +K+G Sbjct: 449 IAVRVDKCIVRKVEPEIGLYVDVGVAGLSGFVHISKVKDGKVEALYESSGPFKEGSVHRG 508 Query: 418 VVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATV-----ELAD 472 V+ A + + + + G IV+ + V G V ++A+ Sbjct: 509 RVIGYSAFDGMYLMTFEPTIIEQQFIRLEDVPAGEIVSCTIEKVVVGGQGVSGLVVKVAE 568 Query: 473 GVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIA 532 G+ GY+ + + R++ G V+A+ V + R + L+++ + I Sbjct: 569 GITGYVHETHFADVRLQHPEKKFREGMTVKARVLSVRPRKRQMRLTLKKTLVNSDTPIIK 628 Query: 533 TVNKQEDANFSNNAMAEA 550 + ++ E + +++ Sbjct: 629 SFDEVEVGQQALGTISDI 646 Score = 62.7 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 64/399 (16%), Positives = 134/399 (33%), Gaps = 70/399 (17%) Query: 169 SRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKR 227 +++ + + + + L +G V G V ++ + + L + G + I ++ Sbjct: 124 KKKSSSDEDGTKIEALNYKRLAKGSVVLGQVSAISHHNITIALPNNLSGNVSIAAISNVV 183 Query: 228 VKHPSE------------------------IVNVGDEITVKVLKFDR-----ERTRVSLG 258 + + VG + VL ++ + L Sbjct: 184 TAKIQQAAEASDDDDSADENDDDDDIELNSLFEVGQYVRAYVLSTKEGEGSGKKNHIELS 243 Query: 259 LKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE---EGVEGLVHVSEMDWTNKN 315 L+ + ++ T + VT++ D+G +E+ + ++G + ++ Sbjct: 244 LRPEDANSGMSKNDVVANATVM-AAVTSVQDHGYEMELGVDNKKLKGFLPKKDVGSEVDE 302 Query: 316 IHPSKVVNVGDVVEVMVLDIDEERRRISL-GLKQCKANPWQQFA---ETHNKGDRVEGKI 371 + + G V +V + + ++ L K KA+ A T G V+ + Sbjct: 303 LR----LQPGAVSLCLVKSVSGKIAQLCLDSEKLGKADNIATEATTVNTFQPGTVVDVLV 358 Query: 372 KSITDFGIFIGLDGGIDGLVHLS-DISWNVAGEEAVR---EYKKGDEIAAVVLQVDAERE 427 S T G+ G I G + ++ D+ + AG +AV +YK G + A V+ + Sbjct: 359 TSTTGRGLL----GKILGHLPVTADLIHSGAGPDAVDLDAKYKVGSRVKARVICTFPNAK 414 Query: 428 RISLGVKQLAEDPFNNWVALNKKGAIVTGK--------------VTAVDAK-GATVELA- 471 LG+ L KG V V+ + G V++ Sbjct: 415 NPKLGI-SLLPHIIKLQAKKAGKGGQAKPPLNVLPIAVRVDKCIVRKVEPEIGLYVDVGV 473 Query: 472 DGVEGYLRASEASRDRVEDATL---VLSVGDEVEAKFTG 507 G+ G++ S+ +VE G + G Sbjct: 474 AGLSGFVHISKVKDGKVEALYESSGPFKEGSVHRGRVIG 512 >UniRef50_B4WRF0 S1 RNA binding domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WRF0_9SYNE Length = 304 Score = 224 bits (572), Expect = 6e-57, Method: Composition-based stats. Identities = 76/270 (28%), Positives = 136/270 (50%), Gaps = 13/270 (4%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK---NAQG 58 E FA+ E+ ++ + GS++ G V + D VD G KS + +P ++ + Sbjct: 17 AEDFAKALEQ--QDYQFSRGSVITGKVETHESDGAYVDIGGKSAAFLPTKEASIDSDILL 74 Query: 59 ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 E + +G E + +D G+ ++S + E W L + E+ + + I+G KG Sbjct: 75 EEILPIGTERKFLIIRDQDANGQLVISIRAMEIKELWERLRERQENGDVLEVTISGSNKG 134 Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 G T +++G+RAF+P S + R V D L G + +++D+++N +++S R Sbjct: 135 GVTADVSGLRAFIPRSHLA-RRVEDLDTLMGATINAAFLEVDEEKNKLLLSERI------ 187 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVG 238 A R + +L +G ++G + +L +GAFVD GG GLLHI ++ + ++ VG Sbjct: 188 -AARATAMSSLTKGELIEGTIASLKPFGAFVDFGGASGLLHIKQISKSYISALGDVFKVG 246 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWV 268 D I VL D +R R++L + L + P Sbjct: 247 DPIKAVVLNIDEQRGRIALSTQVLEKYPGE 276 Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats. Identities = 58/251 (23%), Positives = 110/251 (43%), Gaps = 12/251 (4%) Query: 192 GMEVKGIVKNLTDYGAFVDLGGVDG-LLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDR 250 G + G V+ GA+VD+GG L + + EI+ +G E +++ Sbjct: 34 GSVITGKVETHESDGAYVDIGGKSAAFLPTKEASIDSDILLEEILPIGTERKFLIIRDQD 93 Query: 251 ERTRVSLGLKQLG-EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEM 309 ++ + ++ + ++ W + +R G L ++ G ++ G+ + S + Sbjct: 94 ANGQLVISIRAMEIKELWERLRERQENGDVLEVTISGSNKGGVTADVS-GLRAFIPRSHL 152 Query: 310 DWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEG 369 +++ +G + L++DEE+ ++ L + + KG+ +EG Sbjct: 153 ARRVEDLDTL----MGATINAAFLEVDEEKNKLLLSERIA---ARATAMSSLTKGELIEG 205 Query: 370 KIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERI 429 I S+ FG F+ GG GL+H+ IS +K GD I AVVL +D +R RI Sbjct: 206 TIASLKPFGAFVDF-GGASGLLHIKQIS-KSYISALGDVFKVGDPIKAVVLNIDEQRGRI 263 Query: 430 SLGVKQLAEDP 440 +L + L + P Sbjct: 264 ALSTQVLEKYP 274 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 48/258 (18%), Positives = 108/258 (41%), Gaps = 11/258 (4%) Query: 268 VAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDV 327 ++ G+ +TG+V G +V+I + E + +I +++ +G Sbjct: 25 EQQDYQFSRGSVITGKVETHESDGAYVDIGGKSAAFLPTKEAS-IDSDILLEEILPIGTE 83 Query: 328 VEVMVLDIDEERRRISLGLKQCKANP-WQQFAETHNKGDRVEGKIKSITDFGIFIGLDGG 386 + +++ + ++ + ++ + W++ E GD +E I G+ + G Sbjct: 84 RKFLIIRDQDANGQLVISIRAMEIKELWERLRERQENGDVLEVTISGSNKGGVTADV-SG 142 Query: 387 IDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVA 446 + + S ++ V + + G I A L+VD E+ ++ L + A ++ Sbjct: 143 LRAFIPRSHLARRVEDLDTL----MGATINAAFLEVDEEKNKLLLSERIAAR---ATAMS 195 Query: 447 LNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFT 506 KG ++ G + ++ GA V+ G G L + S+ + V VGD ++A Sbjct: 196 SLTKGELIEGTIASLKPFGAFVDFG-GASGLLHIKQISKSYISALGDVFKVGDPIKAVVL 254 Query: 507 GVDRKNRAISLSVRAKDE 524 +D + I+LS + ++ Sbjct: 255 NIDEQRGRIALSTQVLEK 272 Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats. Identities = 59/273 (21%), Positives = 116/273 (42%), Gaps = 14/273 (5%) Query: 90 KRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRA-FLPGSL--VDVRPVRDTLH 146 +A + + +TG + G V++ G A FLP +D + + + Sbjct: 19 DFAKALEQQDYQFSRGSVITGKVETHESDGAYVDIGGKSAAFLPTKEASIDSDILLEEIL 78 Query: 147 LEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYG 206 G E +F +I+ +V+S RA+ E + EN G ++ + G Sbjct: 79 PIGTERKFLIIRDQDANGQLVISIRAMEIKELWERLRERQEN---GDVLEVTISGSNKGG 135 Query: 207 AFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDP 266 D+ G+ + + +A +RV+ ++ G I L+ D E+ ++ L + Sbjct: 136 VTADVSGLRAFIPRSHLA-RRVEDLDTLM--GATINAAFLEVDEEKNKLLLSERIAAR-- 190 Query: 267 WVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGD 326 +G + G + +L +G FV+ G GL+H+ ++ + + V VGD Sbjct: 191 -ATAMSSLTKGELIEGTIASLKPFGAFVDFG-GASGLLHIKQISKSYISA-LGDVFKVGD 247 Query: 327 VVEVMVLDIDEERRRISLGLKQCKANPWQQFAE 359 ++ +VL+IDE+R RI+L + + P + + Sbjct: 248 PIKAVVLNIDEQRGRIALSTQVLEKYPGEILKD 280 Score = 49.2 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 41/93 (44%) Query: 447 LNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFT 506 +G+++TGKV ++ GA V++ +L EAS D +L +G E + Sbjct: 30 QFSRGSVITGKVETHESDGAYVDIGGKSAAFLPTKEASIDSDILLEEILPIGTERKFLII 89 Query: 507 GVDRKNRAISLSVRAKDEADEKDAIATVNKQED 539 N + +S+RA + + + + + D Sbjct: 90 RDQDANGQLVISIRAMEIKELWERLRERQENGD 122 >UniRef50_A6S458 Putative uncharacterized protein n=1 Tax=Botryotinia fuckeliana B05.10 RepID=A6S458_BOTFB Length = 1678 Score = 224 bits (572), Expect = 6e-57, Method: Composition-based stats. Identities = 108/569 (18%), Positives = 209/569 (36%), Gaps = 62/569 (10%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ---GELEIQVGDEVDVALD 73 + + V G V I V V G +P + + + ++V + Sbjct: 826 DVKEKKTVHGFVKNITLTAVFVQFGGGLTGLLPKNKIPEKNLRLPDFGFKKYQTIEVKVL 885 Query: 74 AVEDGFGETLLSREKAKRHEAWITLEKAYEDAETV-------------------TGVING 114 ++ G LLS A + + E V ++ Sbjct: 886 TIDHGQRRFLLSMADATSDKKSNEPLAPGANQEAVNPIDETIKSIEDITLGRLTKARVSS 945 Query: 115 KVKGGFTVEL-NGIRAFLPGSL-----VDVRPVRDTLHL--EGKELEFKVIKLD--QKRN 164 V+L + I+ + S D++ + L + ++ +V+ + + Sbjct: 946 VKDTQVNVQLADNIQGRIDVSQAFDSWSDIKSKKQPLKTFSPKQIVDVRVLGIHDARNHR 1005 Query: 165 NVVVSRR-----------AVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-G 212 + +S R + SA+ L+ ++ G V N+ +V++ Sbjct: 1006 FLPISHRSGKTLVFELSAKPSDQTESAQDPVSLDKIKVGSSWLAFVNNVGVDCLWVNISP 1065 Query: 213 GVDGLLHITDMAWK--RVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAI 270 V G + D++ +K + +G I V V D E R+ L + +D Sbjct: 1066 NVRGRISALDVSDDVSLLKDLAANFPIGSAIRVHVKGVDVETNRLDLSARS-SQDSEALT 1124 Query: 271 AKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEV 330 + +G + G+VT + + V++ + + ++++++ PSK + D+V V Sbjct: 1125 FDKLSQGMIVPGKVTRVNERQVMVQLTDSISAPINLTDLCDDYSEADPSK-YSKNDIVRV 1183 Query: 331 MVLDIDEERRRISLGLKQCK--------ANPWQQFAETHNKGDRVEGKIKSITDFGIFIG 382 V DID +R+ L + + +P D V G +K + D G+F+ Sbjct: 1184 CVTDIDVPNKRVRLSTRASRVMNSSAAVQDPEISSISQLKVNDIVRGFVKHVADKGLFVN 1243 Query: 383 LDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFN 442 L G + V +SD+S + ++ E++ + V VD + L +K D Sbjct: 1244 LGGNVTAYVRISDLSDSYI-KDWKSEFQVDQLVKGKVTVVDEVLNHVQLSLKPSVIDKDY 1302 Query: 443 NW---VALNKKGAIVTGKVTAVDAKGAT--VELADGVEGYLRASEASRDRVEDATLVLSV 497 + +VTGK+ V+ G V+ + V G SE + RV D + S Sbjct: 1303 VAPLTFNDIQVNQVVTGKIRKVEDFGVFIVVDGSANVSGLCHQSEMAEKRVHDVKKLYSE 1362 Query: 498 GDEVEAKFTGVDRKNRAISLSVRAKDEAD 526 GD V+A +D + + IS S++A D Sbjct: 1363 GDAVKAIVLKMDTEKKRISFSMKASHFED 1391 Score = 217 bits (553), Expect = 9e-55, Method: Composition-based stats. Identities = 124/591 (20%), Positives = 227/591 (38%), Gaps = 57/591 (9%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA---QGELEIQVGDEVDVALD 73 + G G +V I +V +P + A ++G V+V + Sbjct: 642 DITVGMQSPGTIVNILNTGAVVQFYGNVRGFLPVSEMSEAYIQDPNQHFKIGQVVNVHVL 701 Query: 74 AVEDGFGETLLS-REKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGI--RAF 130 V+ + +S ++ + A K + E V+ ++ K +VE+ G+ +A Sbjct: 702 KVDPEAKKLTVSCKDPSVFGLAQQNALKNLKIGEIVSALVIEKSNDDISVEIQGLGLKAI 761 Query: 131 LP-GSLVDVRPVRDTLHL----EGKEL-EFKVI-KLDQKRNNVVVSRRAVIESENSAERD 183 LP G L D + G+ L + V+ KL+ KR V+ ++ A++++ + Sbjct: 762 LPVGHLTDGSENKSRSSFKNIRVGQVLSDLAVLDKLEPKRLIVLTNKPALVKAAQNKTLL 821 Query: 184 QLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 ++ ++++E V G VKN+T FV GG + GLL + K ++ P I Sbjct: 822 RMFDDVKEKKTVHGFVKNITLTAVFVQFGGGLTGLLPKNKIPEKNLRLPDFGFKKYQTIE 881 Query: 243 VKVLKFDRERTRVSLGLKQLGED--------PWVAIAKRYPE------------GTKLTG 282 VKVL D + R L + D P P G Sbjct: 882 VKVLTIDHGQRRFLLSMADATSDKKSNEPLAPGANQEAVNPIDETIKSIEDITLGRLTKA 941 Query: 283 RVTNLTDYGCFVEIEEGVEGLVHVSEM--DWTNKNIH--PSKVVNVGDVVEVMVLDIDEE 338 RV+++ D V++ + ++G + VS+ W++ P K + +V+V VL I + Sbjct: 942 RVSSVKDTQVNVQLADNIQGRIDVSQAFDSWSDIKSKKQPLKTFSPKQIVDVRVLGIHDA 1001 Query: 339 RRRISLGLK---------QCKANPWQQFAETHNKGDRVEGKIKS-----ITDFGI---FI 381 R L + + A P Q + + K+ S + + G+ ++ Sbjct: 1002 RNHRFLPISHRSGKTLVFELSAKPSDQTESAQDPVSLDKIKVGSSWLAFVNNVGVDCLWV 1061 Query: 382 GLDGGIDGLVHLSDISWNVAG-EEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDP 440 + + G + D+S +V+ ++ + G I V VD E R+ L + + Sbjct: 1062 NISPNVRGRISALDVSDDVSLLKDLAANFPIGSAIRVHVKGVDVETNRLDLSARSSQDSE 1121 Query: 441 FNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDE 500 + +G IV GKVT V+ + V+L D + + ++ D E S D Sbjct: 1122 ALTF-DKLSQGMIVPGKVTRVNERQVMVQLTDSISAPINLTDLCDDYSEADPSKYSKNDI 1180 Query: 501 VEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAF 551 V T +D N+ + LS RA + A+ + N + F Sbjct: 1181 VRVCVTDIDVPNKRVRLSTRASRVMNSSAAVQDPEISSISQLKVNDIVRGF 1231 Score = 194 bits (494), Expect = 7e-48, Method: Composition-based stats. Identities = 112/592 (18%), Positives = 221/592 (37%), Gaps = 69/592 (11%) Query: 9 FEESLKEIETRPGSIVRGVVVAIDKDVVLVDA-GLKSESAIPAEQFKNAQGELE------ 61 + + G IV +V+ D + V+ GL ++ +P + Sbjct: 722 LAQQNALKNLKIGEIVSALVIEKSNDDISVEIQGLGLKAILPVGHLTDGSENKSRSSFKN 781 Query: 62 IQVGDEV-DVALDAVEDGFGETLLSRE----KAKRHEAWITLEKAYEDAETVTGVINGKV 116 I+VG + D+A+ + +L+ + KA +++ + + ++ +TV G + Sbjct: 782 IRVGQVLSDLAVLDKLEPKRLIVLTNKPALVKAAQNKTLLRMFDDVKEKKTVHGFVKNIT 841 Query: 117 KGGFTVELNG-IRAFLPGSLVDVRPVR--DTLHLEGKELEFKVIKLDQKRNNVVVSRRAV 173 V+ G + LP + + + +R D + + +E KV+ +D + ++S Sbjct: 842 LTAVFVQFGGGLTGLLPKNKIPEKNLRLPDFGFKKYQTIEVKVLTIDHGQRRFLLSMADA 901 Query: 174 IESENS----------------AERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDG 216 + S E + +E++ G K V ++ D V L + G Sbjct: 902 TSDKKSNEPLAPGANQEAVNPIDETIKSIEDITLGRLTKARVSSVKDTQVNVQLADNIQG 961 Query: 217 LLHITDM--AWKRVKH---PSEIVNVGDEITVKVLKFDRERTR----VS----------L 257 + ++ +W +K P + + + V+VL R +S L Sbjct: 962 RIDVSQAFDSWSDIKSKKQPLKTFSPKQIVDVRVLGIHDARNHRFLPISHRSGKTLVFEL 1021 Query: 258 GLK---QLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNK 314 K Q + G+ V N+ +V I V G + S +D ++ Sbjct: 1022 SAKPSDQTESAQDPVSLDKIKVGSSWLAFVNNVGVDCLWVNISPNVRGRI--SALDVSDD 1079 Query: 315 NIHPSKV---VNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKI 371 + +G + V V +D E R+ L + + + + ++G V GK+ Sbjct: 1080 VSLLKDLAANFPIGSAIRVHVKGVDVETNRLDLSARSSQ-DSEALTFDKLSQGMIVPGKV 1138 Query: 372 KSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISL 431 + + + + L I ++L+D+ + + + + Y K D + V +D +R+ L Sbjct: 1139 TRVNERQVMVQLTDSISAPINLTDLCDDYSEADPSK-YSKNDIVRVCVTDIDVPNKRVRL 1197 Query: 432 GVKQ--------LAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEA 483 + +DP + ++ K IV G V V KG V L V Y+R S+ Sbjct: 1198 STRASRVMNSSAAVQDPEISSISQLKVNDIVRGFVKHVADKGLFVNLGGNVTAYVRISDL 1257 Query: 484 SRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVN 535 S ++D V V+ K T VD + LS++ + A T N Sbjct: 1258 SDSYIKDWKSEFQVDQLVKGKVTVVDEVLNHVQLSLKPSVIDKDYVAPLTFN 1309 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 102/585 (17%), Positives = 197/585 (33%), Gaps = 85/585 (14%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE----------- 59 E L GS+V G V I+ + + +P + E Sbjct: 141 EGLSYKRLVSGSLVLGQVSQINATDIALSLPNNLTGYVPITAISDKVTERVEAIAAAEED 200 Query: 60 --------------LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYE-- 103 +G + + + D L + K +R E + + A Sbjct: 201 DADDEVEVEDIDLKKMFSLGQYLRAYVVSTSDDTNTATLGKGK-RRIELSLRPQHANNGV 259 Query: 104 ------DAETVTGVINGKVKGGFTVELN----GIRAFLPGSLVDVRPVRDTLHLEGKELE 153 + T+ + G + + GIR F+ + V EG Sbjct: 260 TPQNLINNTTLMASVTSVEDHGLIMNIGLEDTGIRGFMGAKDIGYEVVL-ADVQEGAVFL 318 Query: 154 FKVIKLDQKRNNVVVSRRAVIESENSAERDQLLEN------LQEGMEVKGIVKNLTDYGA 207 V L V + A + + ++ L + G V+ ++ +++ G Sbjct: 319 CMVTGLSSNGKTVKL--CADTQKIGNVKKSNYLTDAPTVDAFLPGTAVETLIVDVSSRGL 376 Query: 208 FVDLGGVDGLLHIT-DMAWKRVK----HPSEIVNVGDEITVKVL----KFDRERTRVSL- 257 G V G++ +T D+ + +G ++ +V+ D ++ +SL Sbjct: 377 T---GKVMGMVDVTADLMHSGTSVMNQELEKKFKIGAKVRGRVICTFPNSDPQKLGISLL 433 Query: 258 ----GLKQLG-------EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE-EGVEGLVH 305 L Q +P + +V + G FV++ +G+ G VH Sbjct: 434 DHVTSLTQQQAGKPGNKVNPLDTLPLSTIVEEVTIKKVES--GVGLFVDVGIKGIPGFVH 491 Query: 306 VSEMDWTNKNIHPSKV--VNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNK 363 +S + VG V VL + + L++ E Sbjct: 492 ISRVKDGKIETLEETTGPYKVGSVHRGRVLGYNSLDGVYLISLEKSVLEQPYLRIEDLKI 551 Query: 364 GDRVEGKIKS--ITD---FGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAV 418 G+ V+GK++ + D G+ + L I GLV + ++ ++ +++K+G + A Sbjct: 552 GEVVKGKVEKLIVNDKGVGGLLVNLAENISGLVPETHLA-DIQLLHPEKKFKEGMAVTAR 610 Query: 419 VLQVDAERERISLGVKQL---AEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVE 475 VL D + +I L +K+ +E P G G + + GA V+ V Sbjct: 611 VLSTDPGKRQIRLTLKKTLVNSESPALVSYDDITVGMQSPGTIVNILNTGAVVQFYGNVR 670 Query: 476 GYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 G+L SE S ++D +G V VD + + +++S + Sbjct: 671 GFLPVSEMSEAYIQDPNQHFKIGQVVNVHVLKVDPEAKKLTVSCK 715 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 81/445 (18%), Positives = 150/445 (33%), Gaps = 47/445 (10%) Query: 148 EGKELEFKVIKLDQKRNNVVV----SRRAVIESENSAERDQLLENLQEGMEVKGIVKNLT 203 G+ L V+ N + R + A +NL + V ++ Sbjct: 219 LGQYLRAYVVSTSDDTNTATLGKGKRRIELSLRPQHANNGVTPQNLINNTTLMASVTSVE 278 Query: 204 DYGAFVDLG----GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSL-- 257 D+G +++G G+ G + D+ ++ V V G V V L Sbjct: 279 DHGLIMNIGLEDTGIRGFMGAKDIGYEVV---LADVQEGAVFLCMVTGLSSNGKTVKLCA 335 Query: 258 ------GLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDW 311 +K+ + GT + + +++ G ++ V+ + Sbjct: 336 DTQKIGNVKKSNYLTDAPTVDAFLPGTAVETLIVDVSSRGLTGKVMGMVDVTADLMHSGT 395 Query: 312 TNKNIHPSKVVNVGDVVEVMVL----DIDEERRRISL-----GLKQCKA-------NPWQ 355 + N K +G V V+ + D ++ ISL L Q +A NP Sbjct: 396 SVMNQELEKKFKIGAKVRGRVICTFPNSDPQKLGISLLDHVTSLTQQQAGKPGNKVNPLD 455 Query: 356 QFAETHNKGDRVEGKIKSITDFGIFIGLD-GGIDGLVHLSDISWNVAG--EEAVREYKKG 412 + + K++S G+F+ + GI G VH+S + EE YK G Sbjct: 456 TLPLSTIVEEVTIKKVESGV--GLFVDVGIKGIPGFVHISRVKDGKIETLEETTGPYKVG 513 Query: 413 DEIAAVVLQVDAERERISLGV-KQLAEDPFNNWVALNKKGAIVTGKVTAVDAK-----GA 466 VL ++ + + K + E P+ + K G +V GKV + G Sbjct: 514 SVHRGRVLGYNSLDGVYLISLEKSVLEQPYLR-IEDLKIGEVVKGKVEKLIVNDKGVGGL 572 Query: 467 TVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEAD 526 V LA+ + G + + + ++ G V A+ D R I L+++ Sbjct: 573 LVNLAENISGLVPETHLADIQLLHPEKKFKEGMAVTARVLSTDPGKRQIRLTLKKTLVNS 632 Query: 527 EKDAIATVNKQEDANFSNNAMAEAF 551 E A+ + + S + Sbjct: 633 ESPALVSYDDITVGMQSPGTIVNIL 657 Score = 42.3 bits (98), Expect = 0.057, Method: Composition-based stats. Identities = 10/87 (11%), Positives = 24/87 (27%), Gaps = 5/87 (5%) Query: 13 LKEIETRPGSIVRGVVVAIDKDVVL--VDAGLKSESAIPAEQFKN---AQGELEIQVGDE 67 L + + +V G + ++ V VD + + GD Sbjct: 1306 LTFNDIQVNQVVTGKIRKVEDFGVFIVVDGSANVSGLCHQSEMAEKRVHDVKKLYSEGDA 1365 Query: 68 VDVALDAVEDGFGETLLSREKAKRHEA 94 V + ++ S + + + Sbjct: 1366 VKAIVLKMDTEKKRISFSMKASHFEDG 1392 >UniRef50_A4RTM3 Plastid ribosomal protein S1, imported to chloroplast, small ribosomal subunit n=2 Tax=Ostreococcus RepID=A4RTM3_OSTLU Length = 339 Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats. Identities = 79/265 (29%), Positives = 138/265 (52%), Gaps = 13/265 (4%) Query: 4 SFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQ 63 FA L ++ + + G ++ G + A D V+ G KSE+ P + Sbjct: 46 EFASLLDKY--QYNYKVGDVISGKIKACDAKGAWVEIGAKSEALCPTSEASLGNVRNAAA 103 Query: 64 VGD---EVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 V D + D + ++G G LS + + +AW +A D +TG + +GG Sbjct: 104 VFDIDCDYDFEIIQDDNGEGCMTLSVRRMELAKAWDRCREAQADDAALTGDVLSVNRGGL 163 Query: 121 TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 VE+ +R F+P S + VR + + L G++L FK I++D+++N +V+S R + ++ Sbjct: 164 LVEVEKLRGFVPQSHIGVRTL-NREELIGQQLPFKFIEVDEEKNRLVLSHRLATDMVSA- 221 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 E L+ G V+G+V+ + YGAFVD+GG GLLHI+ ++ +R+ +++ GD Sbjct: 222 ------EGLEVGDVVEGMVQAVKPYGAFVDVGGQSGLLHISQISHERIVAVENVLSPGDR 275 Query: 241 ITVKVLKFDRERTRVSLGLKQLGED 265 I V V+ D E+ R+SL K+L ++ Sbjct: 276 IKVLVMSKDAEKGRLSLSTKKLEQN 300 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 59/254 (23%), Positives = 122/254 (48%), Gaps = 12/254 (4%) Query: 188 NLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSEIVNVGDEITVKVL 246 N + G + G +K GA+V++G + L ++ + V++ + + ++ + +++ Sbjct: 57 NYKVGDVISGKIKACDAKGAWVEIGAKSEALCPTSEASLGNVRNAAAVFDIDCDYDFEII 116 Query: 247 KFDRERTRVSLGLKQLG-EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVH 305 + D ++L ++++ W + + LTG V ++ G VE+E + G V Sbjct: 117 QDDNGEGCMTLSVRRMELAKAWDRCREAQADDAALTGDVLSVNRGGLLVEVE-KLRGFVP 175 Query: 306 VSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGD 365 S + + ++ +++ G + +++DEE+ R+ L + AE GD Sbjct: 176 QSHI--GVRTLNREELI--GQQLPFKFIEVDEEKNRLVLSHRLATD---MVSAEGLEVGD 228 Query: 366 RVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAE 425 VEG ++++ +G F+ + GG GL+H+S IS GD I +V+ DAE Sbjct: 229 VVEGMVQAVKPYGAFVDV-GGQSGLLHISQISHERIV-AVENVLSPGDRIKVLVMSKDAE 286 Query: 426 RERISLGVKQLAED 439 + R+SL K+L ++ Sbjct: 287 KGRLSLSTKKLEQN 300 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 62/290 (21%), Positives = 114/290 (39%), Gaps = 11/290 (3%) Query: 268 VAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDV 327 Y G ++G++ G +VEI E L SE N + + V ++ Sbjct: 52 DKYQYNYKVGDVISGKIKACDAKGAWVEIGAKSEALCPTSEASLGN-VRNAAAVFDIDCD 110 Query: 328 VEVMVLDIDEERRRISLGLKQCK-ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGG 386 + ++ D ++L +++ + A W + E + G + S+ G+ + ++ Sbjct: 111 YDFEIIQDDNGEGCMTLSVRRMELAKAWDRCREAQADDAALTGDVLSVNRGGLLVEVEK- 169 Query: 387 IDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVA 446 + G V S I E + G ++ ++VD E+ R+ L + + Sbjct: 170 LRGFVPQSHIGVRTLNREEL----IGQQLPFKFIEVDEEKNRLVLSHRLATD---MVSAE 222 Query: 447 LNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFT 506 + G +V G V AV GA V++ G G L S+ S +R+ VLS GD ++ Sbjct: 223 GLEVGDVVEGMVQAVKPYGAFVDVG-GQSGLLHISQISHERIVAVENVLSPGDRIKVLVM 281 Query: 507 GVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAAKG 556 D + +SLS + ++ E A E +AA+G Sbjct: 282 SKDAEKGRLSLSTKKLEQNHGDMLRNPAAVFETAEDMGRQFREKMQAAEG 331 Score = 57.3 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 34/80 (42%), Gaps = 4/80 (5%) Query: 18 TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQG---ELEIQVGDEVDVALDA 74 G +V G+V A+ VD G +S + Q + + E + GD + V + + Sbjct: 224 LEVGDVVEGMVQAVKPYGAFVDVGGQS-GLLHISQISHERIVAVENVLSPGDRIKVLVMS 282 Query: 75 VEDGFGETLLSREKAKRHEA 94 + G LS +K +++ Sbjct: 283 KDAEKGRLSLSTKKLEQNHG 302 >UniRef50_Q5KH56 RRNA processing-related protein, putative n=2 Tax=Filobasidiella neoformans RepID=Q5KH56_CRYNE Length = 1484 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 108/575 (18%), Positives = 228/575 (39%), Gaps = 60/575 (10%) Query: 4 SFAQ--LFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQG 58 SF Q L + ++ E + G ++G + + ++ V+ + + + + Sbjct: 510 SFEQSVLSQLFMQVDELKVGQQLKGTIRRLTDKMLFVNVHGNVDGIVHPTHYADIRLKHP 569 Query: 59 ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYED---AETVTGVINGK 115 + + V + +E +L+ +K E+ + + + +ED E G + Sbjct: 570 QKRFKPEGSVKARVLYLEPTRNRVVLTLKK-TFLESDLAVPQGFEDLKVGEVTLGSVLKI 628 Query: 116 VKGGFTVELN-GIRAFLPGSLVDVRPVRDTLH--LEGKELEFKVIKLDQKRNNVVVSRRA 172 V G VEL G++AF+P S +++ GK L +VI +D + +VVS + Sbjct: 629 VDKGVIVELFAGLKAFMPHSECSQTHIKNLSEAFYIGKPLTVRVITVDASASRIVVSAKQ 688 Query: 173 VIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL--GGVDGLLHITDMAWKR--- 227 + + E L+ G V G V + V L G+ LL +++++ +R Sbjct: 689 AAPTAPATAA----EKLEVGEAVSGTVSQVHTEQVVVKLDGNGLTALLSLSNLSNQRHTG 744 Query: 228 VKHPSEIVNVGDEIT-VKVLKFDRERTRVSLGLKQL-----------GEDPW-----VAI 270 ++ + G++I + V+ + + + +K+ + P V Sbjct: 745 IEELRRSLKEGEKIDDLVVVSKNPVSGLIIVNIKKTITAKKEKAKKEDKAPSGISAHVKA 804 Query: 271 AKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEV 330 G +TG V T G V++ + G VH + + VG+ V+ Sbjct: 805 IDAIEVGQIITGTVQEQTSQGYMVQLPNNLRGRVHPCDSSDDLALAAGHGPLTVGEEVKC 864 Query: 331 MVLDIDEERRRISLGL-------KQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGL 383 VLD++ +R I L K+ + + +G+ V G +K+I G+F+ L Sbjct: 865 YVLDVNRSKRAIDLSTRLSRVQGKENVVDREINTVDDLKEGESVRGLVKNIAGHGVFVSL 924 Query: 384 DGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNN 443 + + + ++ ++ ++ ++ +L ++ I + ++ ++P + Sbjct: 925 GRNVTARIMIKELFDEYV-KDWKSRFEINQLVSGKILSINPGSNSIEMTLR---KNPSKS 980 Query: 444 W-------VALNKKGAIVTGKVTAVDAKGATVELAD-GVEGYLRASEASRDRVEDATLVL 495 ++ ++G V V V+A G +++ V G SE + +R D L Sbjct: 981 AKKTALLSLSDFEEGQKVVAVVRKVEAYGMFLKIEGSNVSGLCHKSEITDNRKADVAQAL 1040 Query: 496 S---VGDEVEAKFTGVDRKNRAISLSVRAKDEADE 527 GD+V+AK +D + IS ++A +E Sbjct: 1041 KGFREGDQVKAKIVSIDTEKGKISFGIKASYFGEE 1075 Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 100/554 (18%), Positives = 214/554 (38%), Gaps = 41/554 (7%) Query: 27 VVVAIDKD-VVLVDAGLKSESAIPAEQFKNAQGEL------EIQVGDEVDVALDAVEDGF 79 V + D V+V E + + + + + + G + Sbjct: 445 KVTRVLNDWGVMVRTQDGLEGFVHISHLADERIPVLSNATPQFKAGTLHRARVIGHSPMD 504 Query: 80 GETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNG-IRAFL-PGSLVD 137 G LLS E++ + ++ +++ + + + G I V ++G + + P D Sbjct: 505 GVLLLSFEQSVLSQLFMQVDE-LKVGQQLKGTIRRLTDKMLFVNVHGNVDGIVHPTHYAD 563 Query: 138 VRPVRDTLHLEGK-ELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVK 196 +R + + ++ +V+ L+ RN VV++ + E+ Q E+L+ G Sbjct: 564 IRLKHPQKRFKPEGSVKARVLYLEPTRNRVVLTLKKTF-LESDLAVPQGFEDLKVGEVTL 622 Query: 197 GIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRV 255 G V + D G V+L G+ + ++ + +K+ SE +G +TV+V+ D +R+ Sbjct: 623 GSVLKIVDKGVIVELFAGLKAFMPHSECSQTHIKNLSEAFYIGKPLTVRVITVDASASRI 682 Query: 256 SLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI-EEGVEGLVHVSEMDWTNK 314 + KQ A++ G ++G V+ + V++ G+ L+ +S + Sbjct: 683 VVSAKQAAPTAPATAAEKLEVGEAVSGTVSQVHTEQVVVKLDGNGLTALLSLSNLSNQRH 742 Query: 315 --NIHPSKVVNVGDVVE-VMVLDIDEERRRISLGLKQCKANPWQQFA------------- 358 + + G+ ++ ++V+ + I + +K+ ++ Sbjct: 743 TGIEELRRSLKEGEKIDDLVVVSKNPVSGLIIVNIKKTITAKKEKAKKEDKAPSGISAHV 802 Query: 359 ---ETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEI 415 + G + G ++ T G + L + G VH D S ++A G+E+ Sbjct: 803 KAIDAIEVGQIITGTVQEQTSQGYMVQLPNNLRGRVHPCDSSDDLALAAGHGPLTVGEEV 862 Query: 416 AAVVLQVDAERERISLGV-------KQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATV 468 VL V+ + I L K+ D N V K+G V G V + G V Sbjct: 863 KCYVLDVNRSKRAIDLSTRLSRVQGKENVVDREINTVDDLKEGESVRGLVKNIAGHGVFV 922 Query: 469 ELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRA-KDEADE 527 L V + E + V+D + V K ++ + +I +++R ++ + Sbjct: 923 SLGRNVTARIMIKELFDEYVKDWKSRFEINQLVSGKILSINPGSNSIEMTLRKNPSKSAK 982 Query: 528 KDAIATVNKQEDAN 541 K A+ +++ E+ Sbjct: 983 KTALLSLSDFEEGQ 996 Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats. Identities = 80/462 (17%), Positives = 168/462 (36%), Gaps = 28/462 (6%) Query: 102 YEDAETVTGVINGKVKGGFTVELN-------GIRAFLPGSLVDVRPVRDTLHLEGKELEF 154 E + G + + G+ V + + F+ V + V + G+ L Sbjct: 247 LETGYFLVGEVKSEEDKGWIVGVGLNTQGGSSVEGFVSKDEVA-KFVPAQALIPGQLLPA 305 Query: 155 KVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV 214 + + +S + + + ++ G V ++ + G V + G Sbjct: 306 TISSIAAGGRVAHLSLNQQDITRSQISEVSTVGSIVPGHSVNALITAVVPSGLNVKVAGF 365 Query: 215 -DGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQL-----GEDPWV 268 DG + + + +G +I +V+ + S L L P Sbjct: 366 FDGTIDLAHLPLGE-DDIENKYKIGKKIRARVIYDNLAANPHSFALSALPHVLNFTSPTQ 424 Query: 269 AIAKRY-----PEGTKLTG-RVTNL-TDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKV 321 P G +VT + D+G V ++G+EG VH+S + + + Sbjct: 425 EGDNTPLELAIPIGKVYQSVKVTRVLNDWGVMVRTQDGLEGFVHISHLADERIPVLSNAT 484 Query: 322 --VNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGI 379 G + V+ + L +Q + + G +++G I+ +TD + Sbjct: 485 PQFKAGTLHRARVIGHSPMDGVLLLSFEQSVLSQLFMQVDELKVGQQLKGTIRRLTDKML 544 Query: 380 FIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQL--- 436 F+ + G +DG+VH + + ++ + + +K + A VL ++ R R+ L +K+ Sbjct: 545 FVNVHGNVDGIVHPTHYA-DIRLKHPQKRFKPEGSVKARVLYLEPTRNRVVLTLKKTFLE 603 Query: 437 AEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLS 496 ++ K G + G V + KG VEL G++ ++ SE S+ +++ + Sbjct: 604 SDLAVPQGFEDLKVGEVTLGSVLKIVDKGVIVELFAGLKAFMPHSECSQTHIKNLSEAFY 663 Query: 497 VGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQE 538 +G + + VD I +S + A + E Sbjct: 664 IGKPLTVRVITVDASASRIVVSAKQAAPTAPATAAEKLEVGE 705 Score = 174 bits (442), Expect = 7e-42, Method: Composition-based stats. Identities = 105/543 (19%), Positives = 199/543 (36%), Gaps = 45/543 (8%) Query: 15 EIETRPGSIVRGVVVAIDKDVVLVDAGLKS------ESAIPAEQFKNAQGELEIQVGDEV 68 + + G + G V + + +V GL + E + ++ + G + Sbjct: 244 KKDLETGYFLVGEVKSEEDKGWIVGVGLNTQGGSSVEGFVSKDEVAKFVPAQALIPGQLL 303 Query: 69 DVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTG-----VINGKVKGGFTVE 123 + ++ G LS + + + + V G +I V G V+ Sbjct: 304 PATISSIAAGGRVAHLSLNQQDITRS--QISEVSTVGSIVPGHSVNALITAVVPSGLNVK 361 Query: 124 LNGIR------AFLPGSLVDVRPVRDTLHLEGKELEFKVI--KLDQKRNNVVVSRRAVIE 175 + G A LP D+ + + GK++ +VI L ++ +S + Sbjct: 362 VAGFFDGTIDLAHLPLGEDDI----ENKYKIGKKIRARVIYDNLAANPHSFALSALPHVL 417 Query: 176 SENSAERDQLLENLQ----EGMEVKGI-VKNL-TDYGAFVDL-GGVDGLLHITDMAWKRV 228 + S ++ L+ G + + V + D+G V G++G +HI+ +A +R+ Sbjct: 418 NFTSPTQEGDNTPLELAIPIGKVYQSVKVTRVLNDWGVMVRTQDGLEGFVHISHLADERI 477 Query: 229 KHPSEI---VNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVT 285 S G +V+ + L +Q G +L G + Sbjct: 478 PVLSNATPQFKAGTLHRARVIGHSPMDGVLLLSFEQSVLSQLFMQVDELKVGQQLKGTIR 537 Query: 286 NLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLG 345 LTD FV + V+G+VH + + HP K V+ VL ++ R R+ L Sbjct: 538 RLTDKMLFVNVHGNVDGIVHPTHYADI-RLKHPQKRFKPEGSVKARVLYLEPTRNRVVLT 596 Query: 346 LKQCKANPWQQFA---ETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAG 402 LK+ E G+ G + I D G+ + L G+ + S+ S Sbjct: 597 LKKTFLESDLAVPQGFEDLKVGEVTLGSVLKIVDKGVIVELFAGLKAFMPHSECSQTHI- 655 Query: 403 EEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVD 462 + + G + V+ VDA RI + KQ A + G V+G V+ V Sbjct: 656 KNLSEAFYIGKPLTVRVITVDASASRIVVSAKQAAPTAPATAAEKLEVGEAVSGTVSQVH 715 Query: 463 AKGATVEL-ADGVEGYLRASEASRDR---VEDATLVLSVGDEV-EAKFTGVDRKNRAISL 517 + V+L +G+ L S S R +E+ L G+++ + + + I + Sbjct: 716 TEQVVVKLDGNGLTALLSLSNLSNQRHTGIEELRRSLKEGEKIDDLVVVSKNPVSGLIIV 775 Query: 518 SVR 520 +++ Sbjct: 776 NIK 778 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 69/413 (16%), Positives = 148/413 (35%), Gaps = 42/413 (10%) Query: 145 LHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQL------------LENLQEG 192 L + G+ + KV+ L + +S+ + E+ A R +L ++L+ G Sbjct: 191 LFVPGQYVHAKVLTLYPTASQSFISQYPITETTKLASRVELTLIPEKVNSEVAKKDLETG 250 Query: 193 MEVKGIVKNLTDYGAFVDLG-------GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKV 245 + G VK+ D G V +G V+G + ++A P++ + G + + Sbjct: 251 YFLVGEVKSEEDKGWIVGVGLNTQGGSSVEGFVSKDEVAKF---VPAQALIPGQLLPATI 307 Query: 246 LKFDRERTRVSLGLKQ----LGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVE 301 L L Q + V+ G + +T + G V++ + Sbjct: 308 SSIAAGGRVAHLSLNQQDITRSQISEVSTVGSIVPGHSVNALITAVVPSGLNVKVAGFFD 367 Query: 302 GLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCK-----ANPWQQ 356 G + ++ + +I +G + V+ + S L +P Q+ Sbjct: 368 GTIDLAHLPLGEDDI--ENKYKIGKKIRARVIYDNLAANPHSFALSALPHVLNFTSPTQE 425 Query: 357 FAETHNKGDRVEGKI-------KSITDFGIFIGLDGGIDGLVHLSDISWNVAG--EEAVR 407 T + GK+ + + D+G+ + G++G VH+S ++ A Sbjct: 426 GDNTPLELAIPIGKVYQSVKVTRVLNDWGVMVRTQDGLEGFVHISHLADERIPVLSNATP 485 Query: 408 EYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGAT 467 ++K G A V+ + L +Q V K G + G + + K Sbjct: 486 QFKAGTLHRARVIGHSPMDGVLLLSFEQSVLSQLFMQVDELKVGQQLKGTIRRLTDKMLF 545 Query: 468 VELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 V + V+G + + + R++ V+A+ ++ + L+++ Sbjct: 546 VNVHGNVDGIVHPTHYADIRLKHPQKRFKPEGSVKARVLYLEPTRNRVVLTLK 598 Score = 45.7 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 45/282 (15%), Positives = 93/282 (32%), Gaps = 58/282 (20%) Query: 276 EGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWT----------------------- 312 GT + RV + + + + V ++E+ T Sbjct: 123 PGTHVLARVHTILPLHLILSLPNNLLAHVPITEISNTLTQLLTAEEAMAVDEGEEESDDE 182 Query: 313 NKNIHPSKVVNVGDVVEVMVLDIDEE-----------------RRRISLGLKQCKANPWQ 355 + +++ G V VL + R+ L L K N + Sbjct: 183 SSAPDLAQLFVPGQYVHAKVLTLYPTASQSFISQYPITETTKLASRVELTLIPEKVN-SE 241 Query: 356 QFAETHNKGDRVEGKIKSITDFGIFIGL------DGGIDGLVHLSDISWNVAGEEAVREY 409 + G + G++KS D G +G+ ++G V +++ V + + Sbjct: 242 VAKKDLETGYFLVGEVKSEEDKGWIVGVGLNTQGGSSVEGFVSKDEVAKFVPAQALI--- 298 Query: 410 KKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTG-----KVTAVDAK 464 G + A + + A L + Q + + ++ G+IV G +TAV Sbjct: 299 -PGQLLPATISSIAAGGRVAHLSLNQ-QDITRSQISEVSTVGSIVPGHSVNALITAVVPS 356 Query: 465 GATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFT 506 G V++A +G + + +D +G ++ A+ Sbjct: 357 GLNVKVAGFFDGTIDLAHLPLG-EDDIENKYKIGKKIRARVI 397 >UniRef50_C1EEV9 Predicted protein n=2 Tax=Micromonas RepID=C1EEV9_9CHLO Length = 387 Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats. Identities = 80/274 (29%), Positives = 132/274 (48%), Gaps = 13/274 (4%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE- 61 + F +L + + + G V G V D VD G K+ + P + AQ Sbjct: 71 KEFERLLVDY--QFSYKVGDRVTGKVFHCDAKGAWVDIGAKAAALCPGSEASLAQARNAA 128 Query: 62 --IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGG 119 +G+E + + +DG G LS K + AW + + E V V+ +GG Sbjct: 129 AVFDIGEEYEFEIIRDDDGDGSLTLSVRKIQLEAAWNRCREMQANDEAVNSVVLSVNRGG 188 Query: 120 FTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 VE+ +R F+P S + +R V + L G+ + K +++D+++N +V+S R + + Sbjct: 189 LLVEVEHLRGFVPQSHIAMR-VPNRDELIGQSVPVKFLEVDEEKNRLVMSNRLATDVVSG 247 Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGD 239 E L G KG+V+ + YGAFVD+GGV GLLHI+ ++ R+ ++ GD Sbjct: 248 -------EGLGVGDVCKGVVQAVKPYGAFVDVGGVSGLLHISQISHDRIVAVENVLAPGD 300 Query: 240 EITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKR 273 E+ V +L D ER+R+SL K+L P + Sbjct: 301 ELKVLILSKDAERSRLSLSTKKLEPSPGDMLRNP 334 Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 61/255 (23%), Positives = 120/255 (47%), Gaps = 12/255 (4%) Query: 188 NLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVL 246 + + G V G V + GA+VD+G L ++ + + ++ + + ++G+E +++ Sbjct: 83 SYKVGDRVTGKVFHCDAKGAWVDIGAKAAALCPGSEASLAQARNAAAVFDIGEEYEFEII 142 Query: 247 KFDRERTRVSLGLKQLG-EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVH 305 + D ++L ++++ E W + + V ++ G VE+E + G V Sbjct: 143 RDDDGDGSLTLSVRKIQLEAAWNRCREMQANDEAVNSVVLSVNRGGLLVEVE-HLRGFVP 201 Query: 306 VSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGD 365 S + P++ +G V V L++DEE+ R+ + + E GD Sbjct: 202 QSHIAMRV----PNRDELIGQSVPVKFLEVDEEKNRLVMSNRLATD---VVSGEGLGVGD 254 Query: 366 RVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAE 425 +G ++++ +G F+ + GG+ GL+H+S IS + GDE+ ++L DAE Sbjct: 255 VCKGVVQAVKPYGAFVDV-GGVSGLLHISQISHDRIV-AVENVLAPGDELKVLILSKDAE 312 Query: 426 RERISLGVKQLAEDP 440 R R+SL K+L P Sbjct: 313 RSRLSLSTKKLEPSP 327 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 63/277 (22%), Positives = 116/277 (41%), Gaps = 11/277 (3%) Query: 274 YPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVL 333 Y G ++TG+V + G +V+I L SE + + V ++G+ E ++ Sbjct: 84 YKVGDRVTGKVFHCDAKGAWVDIGAKAAALCPGSEASLAQAR-NAAAVFDIGEEYEFEII 142 Query: 334 DIDEERRRISLGLKQCK-ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVH 392 D+ ++L +++ + W + E + V + S+ G+ + ++ + G V Sbjct: 143 RDDDGDGSLTLSVRKIQLEAAWNRCREMQANDEAVNSVVLSVNRGGLLVEVE-HLRGFVP 201 Query: 393 LSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGA 452 S I+ V + + G + L+VD E+ R+ + + LA D + G Sbjct: 202 QSHIAMRVPNRDEL----IGQSVPVKFLEVDEEKNRLVMSNR-LATDVVSG--EGLGVGD 254 Query: 453 IVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKN 512 + G V AV GA V++ GV G L S+ S DR+ VL+ GDE++ D + Sbjct: 255 VCKGVVQAVKPYGAFVDVG-GVSGLLHISQISHDRIVAVENVLAPGDELKVLILSKDAER 313 Query: 513 RAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAE 549 +SLS + + + E A+ E Sbjct: 314 SRLSLSTKKLEPSPGDMLRNPALVFEKADEMGRLFRE 350 >UniRef50_Q70DX8 Plastid ribosomal protein S1 n=6 Tax=Viridiplantae RepID=Q70DX8_CHLRE Length = 436 Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats. Identities = 76/278 (27%), Positives = 133/278 (47%), Gaps = 11/278 (3%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ--- 57 M E ++ E + E + G V G V+ +D D V+ G K+ + P + A+ Sbjct: 123 MYEEVEEMLEAV--DYEFKVGDKVSGTVIEVDDDGAYVEIGAKAIAFCPVTECSFARLKT 180 Query: 58 GELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVK 117 ++ G + D + E+ +G+ ++S + W + + E+ TVT + K Sbjct: 181 PLEALRPGMKRDFMVVEDEEEYGQVIVSLAAMEATTFWQRIRQLQEEDITVTVSVESVNK 240 Query: 118 GGFTVELNGIRAFLPGSLVDVRPVRD-TLHLEGKELEFKVIKLDQKRNNVVVSRRAVIES 176 GG V+ F+P S D L G EL+ K +++D++ +V S + + Sbjct: 241 GGMLVKFGIYDGFIPVSQFGPSITPDNMESLVGFELQVKFLEVDEEAERLVFSHKRASST 300 Query: 177 ENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVN 236 ++ ++ + G V G+V+++ YGAF+DLGGV GLLH++ ++ RV +I+ Sbjct: 301 VSND-----IQGFKVGDVVAGVVQSVKPYGAFIDLGGVTGLLHVSQISHDRVLVLDKILQ 355 Query: 237 VGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRY 274 GD+I V +L DRER RV+L K+L P + Sbjct: 356 EGDKIKVMILSQDRERGRVTLSTKKLEPTPGDMLRDPQ 393 Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats. Identities = 70/287 (24%), Positives = 124/287 (43%), Gaps = 11/287 (3%) Query: 268 VAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDV 327 A+ + G K++G V + D G +VEI V+E + + P + + G Sbjct: 132 EAVDYEFKVGDKVSGTVIEVDDDGAYVEIGAKAIAFCPVTECSFA-RLKTPLEALRPGMK 190 Query: 328 VEVMVLDIDEERRRISLGLKQCKANP-WQQFAETHNKGDRVEGKIKSITDFGIFIGLDGG 386 + MV++ +EE ++ + L +A WQ+ + + V ++S+ G+ + G Sbjct: 191 RDFMVVEDEEEYGQVIVSLAAMEATTFWQRIRQLQEEDITVTVSVESVNKGGMLVKF-GI 249 Query: 387 IDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVA 446 DG + +S ++ + G E+ L+VD E ER+ K+ + +N + Sbjct: 250 YDGFIPVSQFGPSITPDNMESL--VGFELQVKFLEVDEEAERLVFSHKRAS-STVSNDIQ 306 Query: 447 LNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFT 506 K G +V G V +V GA ++L GV G L S+ S DRV +L GD+++ Sbjct: 307 GFKVGDVVAGVVQSVKPYGAFIDLG-GVTGLLHVSQISHDRVLVLDKILQEGDKIKVMIL 365 Query: 507 GVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKA 553 DR+ ++LS + + E A MAE F+ Sbjct: 366 SQDRERGRVTLSTKKLEPTPGDMLRDPQLVYEKAEE----MAEQFRK 408 Score = 71.5 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 37/167 (22%), Positives = 72/167 (43%), Gaps = 7/167 (4%) Query: 24 VRGVVVAIDKDVVLVDAGLKSESAIPAEQF--KNAQGELEIQVGDEVDVALDAVEDGFGE 81 V V +++K +LV G+ + IP QF +E VG E+ V V++ Sbjct: 231 VTVSVESVNKGGMLVKFGI-YDGFIPVSQFGPSITPDNMESLVGFELQVKFLEVDEEAER 289 Query: 82 TLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPV 141 + S ++A + + ++ + V GV+ G ++L G+ L S + V Sbjct: 290 LVFSHKRASSTVSND--IQGFKVGDVVAGVVQSVKPYGAFIDLGGVTGLLHVSQISHDRV 347 Query: 142 R--DTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLL 186 D + EG +++ ++ D++R V +S + + + RD L Sbjct: 348 LVLDKILQEGDKIKVMILSQDRERGRVTLSTKKLEPTPGDMLRDPQL 394 >UniRef50_D1Z6Q4 Whole genome shotgun sequence assembly, scaffold_7 n=3 Tax=Sordariales RepID=D1Z6Q4_SORMA Length = 1776 Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats. Identities = 105/566 (18%), Positives = 223/566 (39%), Gaps = 62/566 (10%) Query: 18 TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE---IQVGDEVDVALDA 74 R G V G V I V V G K + +P + + + V + + Sbjct: 807 ARVGEEVAGYVRNITATAVFVQFGGKLTALLPKSMIPKEDQDKPDFGMFKSQSITVKITS 866 Query: 75 VEDGFGETLLSREKAKRHEA------------WITLEKAYED---AETVTGVINGKVKGG 119 V + +++ A + +D + + Sbjct: 867 VNNELNRLVVAVPGATEQVKRVDTKGEKLANPVDESITSLDDISIGKLTKARVVSVKDTQ 926 Query: 120 FTVEL-NGIRAFLPGSLVDVRP--VRDTLHLEG-----KELEFKVIKLDQKRNN------ 165 V+L + I+ + S V ++DT + + +V+ + RN+ Sbjct: 927 VNVQLADNIQGRIDVSQVYDNWEQIKDTKKPLKKFQPKQVVPVRVLGVHDARNHRFLPIS 986 Query: 166 -------VVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGL 217 + +S + E ++ +NL+ G G V N+ +V+L V G Sbjct: 987 HRSSHSVLELSAKPSDVKEGASSEALSFDNLKVGSSYVGFVNNVGQGHLWVNLSPTVRGR 1046 Query: 218 LHITDMAWK--RVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYP 275 ++ + + + + ++ +G + V+V+ D E R+ L + G + + + Sbjct: 1047 VNAMEASDDVSLLTNLAKNFPIGSALRVRVVSVDAESKRLDLSARSPGSEDELTW-DKIA 1105 Query: 276 EGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDI 335 + L G+VT + + V++ E + G VH ++ + +P+K ++V V V+++ Sbjct: 1106 QDVILVGKVTKVDERQVIVKLSETLAGPVHKVDLADDYEEANPAK-FAKNEIVRVAVVEV 1164 Query: 336 DEERRRISLGLKQCK--------ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGI 387 D+ +RI L + + + G+ V G +K+++D G+F+ L G + Sbjct: 1165 DKSNKRIRLSTRPSRILNSSLPVKDKEIVQHTKLEVGEIVRGFVKNVSDKGLFVTLGGNV 1224 Query: 388 DGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAED----PFNN 443 V + ++S + + +++ + ++ V RI + +K D P Sbjct: 1225 TAFVQIKNLS-DAYLKYWKEQFQVDQLVKGRIVSV--ANGRIEMSLKPSVVDKDYVPLTT 1281 Query: 444 WVALNKKGAIVTGKVTAVDAKGATVEL--ADGVEGYLRASEASRDRVEDATLVLSVGDEV 501 ++ K+G +TG+V V+ GA +++ +D + G SE S V+DA + GD+V Sbjct: 1282 -ISDLKEGQTITGRVRKVEEFGAFIDIDGSDNLSGLCHRSEMSDKAVKDARKLYEEGDKV 1340 Query: 502 EAKFTGVDRKNRAISLSVRAKDEADE 527 +AK VD + I+L ++ ++ Sbjct: 1341 KAKVLKVDATAKRINLGLKPSYFGEQ 1366 Score = 201 bits (511), Expect = 7e-50, Method: Composition-based stats. Identities = 102/596 (17%), Positives = 209/596 (35%), Gaps = 63/596 (10%) Query: 9 FEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKS-ESAIPAEQFKNA------QGELE 61 E+ L + + G +V V D V V+ S ++ +P + + Sbjct: 702 LEKQLALKKLQIGDVVSAKVTQKTDDDVFVELADSSLKAILPVAHLTDKSVSKTQSALKK 761 Query: 62 IQVGDEV-DVALDAVEDGFGETLLSRE----KAKRHEAWITLEKAYEDAETVTGVINGKV 116 I V + ++ + + +LS++ KA + ++T E V G + Sbjct: 762 IHVNQTLSELVILEKNEARRSIILSQKPILVKATKEGKFLTSLDGARVGEEVAGYVRNIT 821 Query: 117 KGGFTVELNG-IRAFLPGSLV--DVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAV 173 V+ G + A LP S++ + + D + + + K+ ++ + N +VV+ Sbjct: 822 ATAVFVQFGGKLTALLPKSMIPKEDQDKPDFGMFKSQSITVKITSVNNELNRLVVAVPGA 881 Query: 174 IESENS------------AERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHI 220 E E L+++ G K V ++ D V L + G + + Sbjct: 882 TEQVKRVDTKGEKLANPVDESITSLDDISIGKLTKARVVSVKDTQVNVQLADNIQGRIDV 941 Query: 221 TDMAWKR-----VKHPSEIVNVGDEITVKVLKFDRERT--------RVSLGLKQLGEDPW 267 + + K P + + V+VL R R S + +L P Sbjct: 942 SQVYDNWEQIKDTKKPLKKFQPKQVVPVRVLGVHDARNHRFLPISHRSSHSVLELSAKPS 1001 Query: 268 VA---------IAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNI-H 317 G+ G V N+ +V + V G V+ E + + Sbjct: 1002 DVKEGASSEALSFDNLKVGSSYVGFVNNVGQGHLWVNLSPTVRGRVNAMEASDDVSLLTN 1061 Query: 318 PSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDF 377 +K +G + V V+ +D E +R+ L + + + + + + GK+ + + Sbjct: 1062 LAKNFPIGSALRVRVVSVDAESKRLDLSAR-SPGSEDELTWDKIAQDVILVGKVTKVDER 1120 Query: 378 GIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQL- 436 + + L + G VH D++ + + + K + + V++VD +RI L + Sbjct: 1121 QVIVKLSETLAGPVHKVDLADDYEEANPAK-FAKNEIVRVAVVEVDKSNKRIRLSTRPSR 1179 Query: 437 -------AEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVE 489 +D + G IV G V V KG V L V +++ S ++ Sbjct: 1180 ILNSSLPVKDKEIVQHTKLEVGEIVRGFVKNVSDKGLFVTLGGNVTAFVQIKNLSDAYLK 1239 Query: 490 DATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNN 545 V V+ + V N I +S++ + + T++ ++ Sbjct: 1240 YWKEQFQVDQLVKGRIVSV--ANGRIEMSLKPSVVDKDYVPLTTISDLKEGQTITG 1293 Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats. Identities = 77/431 (17%), Positives = 162/431 (37%), Gaps = 26/431 (6%) Query: 141 VRDTLHL-EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIV 199 V D G +V+ + ++S +E + +E++ G V G+V Sbjct: 484 VEDVGPYKVGSVHAGRVVGYNAFDGMYLIS----LEKSVLEQPFLRIEDIPVGAVVSGVV 539 Query: 200 KNLTDY-----GAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERT 253 + + G V + G+ GL+ A +++P + G ++ +VL D Sbjct: 540 EKMVLNAAGVGGLIVKIADGISGLVPEMHFADVHLQNPEKKFREGLKVKARVLSTDAASR 599 Query: 254 RVSLGLKQLGED---PWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMD 310 ++ L LK+ + P + G + G + N+ +G V+ + G + VSEM Sbjct: 600 QIRLTLKKTLVNSDLPAIQTYDEITVGQQALGTIINVLQHGAIVQFYGRLRGFLPVSEMS 659 Query: 311 WTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFA--ETHNKGDRVE 368 + P + VG V + V+ D + ++ + K A ++ + GD V Sbjct: 660 EAYIH-DPKEHFRVGQTVSIYVISFDPDAAKLIVSCKDPAAFGLEKQLALKKLQIGDVVS 718 Query: 369 GKIKSITDFGIFIGL-DGGIDGLVHLSDISWNVAGE--EAVREYKKGDEI-AAVVLQVDA 424 K+ TD +F+ L D + ++ ++ ++ + A+++ + V+L+ + Sbjct: 719 AKVTQKTDDDVFVELADSSLKAILPVAHLTDKSVSKTQSALKKIHVNQTLSELVILEKNE 778 Query: 425 ERERISLG-----VKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLR 479 R I L VK E F + + G V G V + A V+ + L Sbjct: 779 ARRSIILSQKPILVKATKEGKFLTSLDGARVGEEVAGYVRNITATAVFVQFGGKLTALLP 838 Query: 480 ASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQED 539 S ++ + + + K T V+ + + ++V E ++ Sbjct: 839 KSMIPKEDQDKPDFGMFKSQSITVKITSVNNELNRLVVAVPGATEQVKRVDTKGEKLANP 898 Query: 540 ANFSNNAMAEA 550 + S ++ + Sbjct: 899 VDESITSLDDI 909 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 99/577 (17%), Positives = 181/577 (31%), Gaps = 93/577 (16%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK---------------- 54 ESL GS+V G V AI+ + V +P Sbjct: 145 ESLNFKRLVKGSLVLGSVCAINALDIAVALPNNIIGHVPITAISAPLTKRLEASAGDDDA 204 Query: 55 ---------NAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYED- 104 + E Q+G V + + D + K + L+ + + Sbjct: 205 EESDDENENDVDLESIFQIGQYVRAYVVSTVDEASTHTPGKAKRHIELS---LQPSLANT 261 Query: 105 ---------AETVTGVINGKVKGGFTVELN----GIRAFLPGSLVDVRPVRDTLHLEGKE 151 TV I G+ +++ ++ FL VD + + G Sbjct: 262 GMAEQDVVVNSTVMAAIASVEDHGYVMDIEIADSKLQGFLARKQVD-KSIPQEALQPGAV 320 Query: 152 LEFKVIKLDQKRN-NVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVD 210 L V K + + + + EN ++ G +V ++++G Sbjct: 321 LLCMVTKSAKGKIVQLSTLGETIGNVENVPAAATTIDTFLPGTAADVLVSEVSNHGI--- 377 Query: 211 LGGVDGLLHIT-DMAWKRVK----HPSEIVNVGDEITVKV-----------LKFDRERTR 254 +G + G L +T D+ + VG + +V L + Sbjct: 378 VGKIMGSLDVTADLVHSGAGPDGVDLEDTYKVGSRLKARVICNFPTAKNPKLGISVLKHV 437 Query: 255 VSLGLKQLGED--PWVAIAKRYPEGTKLTGRVTNLTDY-GCFVEIEEGVEGLVHVSEMDW 311 SL K +D P V + V + G +V++ Sbjct: 438 TSLKPKTASKDEQPVVPLQALPHSTIVEKCTVKQVEPEIGLYVDVG-------------- 483 Query: 312 TNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKI 371 +++ P KV G V V+ + + L++ E G V G + Sbjct: 484 -VEDVGPYKV---GSVHAGRVVGYNAFDGMYLISLEKSVLEQPFLRIEDIPVGAVVSGVV 539 Query: 372 KSITD-----FGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAER 426 + + G+ + + GI GLV + +V + +++++G ++ A VL DA Sbjct: 540 EKMVLNAAGVGGLIVKIADGISGLVPEMHFA-DVHLQNPEKKFREGLKVKARVLSTDAAS 598 Query: 427 ERISLGVKQLAED---PFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEA 483 +I L +K+ + P G G + V GA V+ + G+L SE Sbjct: 599 RQIRLTLKKTLVNSDLPAIQTYDEITVGQQALGTIINVLQHGAIVQFYGRLRGFLPVSEM 658 Query: 484 SRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 S + D VG V D + +S + Sbjct: 659 SEAYIHDPKEHFRVGQTVSIYVISFDPDAAKLIVSCK 695 Score = 88.1 bits (217), Expect = 9e-16, Method: Composition-based stats. Identities = 68/444 (15%), Positives = 146/444 (32%), Gaps = 57/444 (12%) Query: 143 DTLHLEGKELEFKVIK-LDQKRNNVVVSRRAVIESENSAERDQL---LENLQEGMEVKGI 198 +++ G+ + V+ +D+ + + IE +++ V Sbjct: 218 ESIFQIGQYVRAYVVSTVDEASTHTPGKAKRHIELSLQPSLANTGMAEQDVVVNSTVMAA 277 Query: 199 VKNLTDYGAFVDLG----GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTR 254 + ++ D+G +D+ + G L + P E + G + V K + Sbjct: 278 IASVEDHGYVMDIEIADSKLQGFLARKQVDKS---IPQEALQPGAVLLCMVTK-SAKGKI 333 Query: 255 VSLGLKQLGEDPWVAI------AKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSE 308 V L + + GT V+ ++++G +I ++ + Sbjct: 334 VQLSTLGETIGNVENVPAAATTIDTFLPGTAADVLVSEVSNHGIVGKIMGSLDVTADLVH 393 Query: 309 MDWTNKNIHPSKVVNVGDVVEVMV-----------LDIDEERRRISLGLKQCKAN--PWQ 355 + VG ++ V L I + SL K + P Sbjct: 394 SGAGPDGVDLEDTYKVGSRLKARVICNFPTAKNPKLGISVLKHVTSLKPKTASKDEQPVV 453 Query: 356 QFAETHNKGDRVEGKIKSITD-FGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDE 414 + + +K + G+++ + G E V YK G Sbjct: 454 PLQALPHSTIVEKCTVKQVEPEIGLYVDV------------------GVEDVGPYKVGSV 495 Query: 415 IAAVVLQVDAERERISLGV-KQLAEDPFNNWVALNKKGAIVTGKVTAVD-----AKGATV 468 A V+ +A + + K + E PF + GA+V+G V + G V Sbjct: 496 HAGRVVGYNAFDGMYLISLEKSVLEQPFLR-IEDIPVGAVVSGVVEKMVLNAAGVGGLIV 554 Query: 469 ELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEK 528 ++ADG+ G + + +++ G +V+A+ D +R I L+++ + Sbjct: 555 KIADGISGLVPEMHFADVHLQNPEKKFREGLKVKARVLSTDAASRQIRLTLKKTLVNSDL 614 Query: 529 DAIATVNKQEDANFSNNAMAEAFK 552 AI T ++ + + + Sbjct: 615 PAIQTYDEITVGQQALGTIINVLQ 638 Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 32/173 (18%), Positives = 74/173 (42%), Gaps = 12/173 (6%) Query: 10 EESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQG---ELEIQVGD 66 +E ++ + G IVRG V + + V G + + + +A + + QV Sbjct: 1190 KEIVQHTKLEVGEIVRGFVKNVSDKGLFVTLGGNVTAFVQIKNLSDAYLKYWKEQFQVDQ 1249 Query: 67 EVDVALDAVEDGFGETLLSREKAKRHEAWITLEKA--YEDAETVTGVINGKVKGGFTVEL 124 V + +V G +S + + + ++ L ++ +T+TG + + G +++ Sbjct: 1250 LVKGRIVSV--ANGRIEMSLKPSVVDKDYVPLTTISDLKEGQTITGRVRKVEEFGAFIDI 1307 Query: 125 NG---IRAFLPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRA 172 +G + S + + V+D L EG +++ KV+K+D + + + Sbjct: 1308 DGSDNLSGLCHRSEMSDKAVKDARKLYEEGDKVKAKVLKVDATAKRINLGLKP 1360 >UniRef50_P29344 30S ribosomal protein S1, chloroplastic n=21 Tax=Embryophyta RepID=RR1_SPIOL Length = 411 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 75/276 (27%), Positives = 127/276 (46%), Gaps = 16/276 (5%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQ----FKNAQG 58 + F ++ + + GS V+G V D + LVD KS + +P + Sbjct: 80 DDFHTALDKY--DFNSEMGSRVKGTVFCTDANGALVDITAKSSAYLPLAEACIYRIKNVE 137 Query: 59 ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 E I G + + + +LS + + AW + + V G I G KG Sbjct: 138 EAGIIPGVREEFVIIGENEADDSLILSLRQIQYELAWERCRQLQAEDVVVKGKIVGANKG 197 Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 G + G+R F+P S + + + L KE+ K +++D++++ +V+S R + Sbjct: 198 GVVALVEGLRGFVPFSQISSKSSAE--ELLEKEIPLKFVEVDEEQSRLVMSNRKAMADSQ 255 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVG 238 + L G V G V++L YGAF+D+GG++GLLH++ ++ RV + ++ G Sbjct: 256 A--------QLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVSDIATVLQPG 307 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRY 274 D + V +L DRER RVSL K+L P I Sbjct: 308 DTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPK 343 Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 64/294 (21%), Positives = 124/294 (42%), Gaps = 15/294 (5%) Query: 150 KELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFV 209 ++L+ ++ N + + + D+ N + G VKG V GA V Sbjct: 54 QKLKQLFEDAYERCRNAPMEGVSFTIDDFHTALDKYDFNSEMGSRVKGTVFCTDANGALV 113 Query: 210 DLGGV-DGLLHITDMAWKRVKHPSEI-VNVGDEITVKVLKFDRERTRVSLGLKQLGED-P 266 D+ L + + R+K+ E + G ++ + + L L+Q+ + Sbjct: 114 DITAKSSAYLPLAEACIYRIKNVEEAGIIPGVREEFVIIGENEADDSLILSLRQIQYELA 173 Query: 267 WVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGD 326 W + E + G++ G V + EG+ G V S++ + + Sbjct: 174 WERCRQLQAEDVVVKGKIVGANKGGV-VALVEGLRGFVPFSQISSKSSAEELLE-----K 227 Query: 327 VVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGG 386 + + +++DEE+ R+ + ++ A+ G V G ++S+ +G FI + GG Sbjct: 228 EIPLKFVEVDEEQSRLVMSNRKAMADSQA----QLGIGSVVTGTVQSLKPYGAFIDI-GG 282 Query: 387 IDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDP 440 I+GL+H+S IS + + + GD + ++L D ER R+SL K+L P Sbjct: 283 INGLLHVSQISHDRVSD-IATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTP 335 Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats. Identities = 61/253 (24%), Positives = 109/253 (43%), Gaps = 12/253 (4%) Query: 275 PEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLD 334 G+++ G V G V+I + ++E + G E +++ Sbjct: 94 EMGSRVKGTVFCTDANGALVDITAKSSAYLPLAEACIYRIKNVEEAGIIPGVREEFVIIG 153 Query: 335 IDEERRRISLGLKQCKAN-PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHL 393 +E + L L+Q + W++ + + V+GKI G+ + L G+ G V Sbjct: 154 ENEADDSLILSLRQIQYELAWERCRQLQAEDVVVKGKIVGANKGGV-VALVEGLRGFVPF 212 Query: 394 SDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAI 453 S IS + EE + + EI ++VD E+ R+ + ++ D A G++ Sbjct: 213 SQISSKSSAEELLEK-----EIPLKFVEVDEEQSRLVMSNRKAMAD----SQAQLGIGSV 263 Query: 454 VTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNR 513 VTG V ++ GA +++ G+ G L S+ S DRV D VL GD ++ DR+ Sbjct: 264 VTGTVQSLKPYGAFIDIG-GINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERG 322 Query: 514 AISLSVRAKDEAD 526 +SLS + + Sbjct: 323 RVSLSTKKLEPTP 335 >UniRef50_A9SPX0 Predicted protein n=2 Tax=cellular organisms RepID=A9SPX0_PHYPA Length = 1785 Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 108/548 (19%), Positives = 207/548 (37%), Gaps = 41/548 (7%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQG-- 58 M + FA L E L PG++V V ++ K+ +L+ + ++ Sbjct: 179 MVKEFAGLTVELLT-----PGAMVNARVRSVLKNGLLLSFLTYFTGTVDIFHLEDPLPGA 233 Query: 59 --ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKV 116 + + + ++ L+ + ++ + + + I +V Sbjct: 234 DWNTKYSENQRLKARILYIDPVAKTIGLTLNPQLLNNVLPSM--SVDVGDVFKDAIVRRV 291 Query: 117 KG--GFTVEL----NGIRAFLPGSLVDVRPVR-DTLHLEGKELEFKVIKLDQKRNNVVVS 169 G +EL N + ++ S+ D + + + GK++ +VI + Sbjct: 292 DATIGMLLELPTKENVVAGYI-SSVSDEHIAKLEKKYTVGKKVRARVI----GHRVMDAL 346 Query: 170 RRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRV 228 A ++ + ++Q M V G V + YGA V L GV L + M+ + Sbjct: 347 AIASLKESVVDQLLLSHADVQPAMNVTGTVIAVEPYGALVQLAEGVKALCPLQHMSEFQR 406 Query: 229 KHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYP---EGTKLTGRVT 285 +PS VG ++ +VL D +++L K+ ++ Y EG G +T Sbjct: 407 SNPSSKFQVGSKLKFRVLSCDHHAKKITLTHKKTLITSKLSPIVSYESAVEGLVTHGFIT 466 Query: 286 NLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLG 345 + D GCFV V+GLVH S + + V VG ++ VL D RR+SL Sbjct: 467 GIEDIGCFVSFYNDVKGLVHKSAL-GIEAGVKAENVFQVGQSIKCRVLRSDPAARRLSLS 525 Query: 346 L--KQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIG------LDGGIDGLVHLSDIS 397 + + + A G V G + + D I + L G HLSD Sbjct: 526 FITTSSRDDASEGAAGDELIGKVVAGTVHHVNDSVIIVNVSTPTGLVKGYLTFPHLSDTL 585 Query: 398 WNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQL---AEDPFNNWVALNKKGAIV 454 ++ E+ K G + +++ +++++ + KQ A + ++ + +++ Sbjct: 586 GHI--EQLKSVTKVGFQFDRLLVLDVTDKQKLIVSAKQSLLQAASSLPSDISQLQPQSVI 643 Query: 455 TGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRA 514 G V + +G V + G + + + V D + SVG V A+ V Sbjct: 644 PGYVANITDRGCFVRFLGRLTGLASVPQVADEFVSDPSNHFSVGQSVRAQVLEVYHDTGK 703 Query: 515 ISLSVRAK 522 SL ++ Sbjct: 704 FSLCLKQS 711 Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats. Identities = 99/538 (18%), Positives = 194/538 (36%), Gaps = 51/538 (9%) Query: 18 TRPGSIVRGVVVAIDKDVVLVDAGLKS-ESAIPAEQFKNAQGELEIQVGDEVDVALDAVE 76 G + VV +I+ L+ G+ + + + + G +++ G V + +V+ Sbjct: 103 VYEGQALTAVVTSIEDHGYLLSFGVPAVSGFLLHRNYLD--GTSKLRTGQLVQGVVISVD 160 Query: 77 DGFGET-------LLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF--------- 120 G L+S K + V + +K G Sbjct: 161 KKRGAVGLKADLGLISSNMVKEFAGLT--VELLTPGAMVNARVRSVLKNGLLLSFLTYFT 218 Query: 121 -TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 TV++ + LPG+ + + + + L+ +++ +D + ++ + + Sbjct: 219 GTVDIFHLEDPLPGADWNTKYSEN------QRLKARILYIDPVAKTIGLTLNPQLLNNVL 272 Query: 180 AERDQLLENLQEGMEVK-GIVKNLTDY-GAFVDLGGVDGLL--HITDMAWKRVKHPSEIV 235 + G K IV+ + G ++L + ++ +I+ ++ + + + Sbjct: 273 PSMS-----VDVGDVFKDAIVRRVDATIGMLLELPTKENVVAGYISSVSDEHIAKLEKKY 327 Query: 236 NVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVE 295 VG ++ +V+ LK+ D + +TG V + YG V+ Sbjct: 328 TVGKKVRARVIGHRVMDALAIASLKESVVDQLLLSHADVQPAMNVTGTVIAVEPYGALVQ 387 Query: 296 IEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQ 355 + EGV+ L + M ++ +PS VG ++ VL D ++I+L K+ Sbjct: 388 LAEGVKALCPLQHMSEFQRS-NPSSKFQVGSKLKFRVLSCDHHAKKITLTHKKTLITSKL 446 Query: 356 QFAETHN---KGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKG 412 ++ +G G I I D G F+ + GLVH S + AG +A ++ G Sbjct: 447 SPIVSYESAVEGLVTHGFITGIEDIGCFVSFYNDVKGLVHKSALGIE-AGVKAENVFQVG 505 Query: 413 DEIAAVVLQVDAERERISLG--VKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVEL 470 I VL+ D R+SL +D G +V G V V+ V + Sbjct: 506 QSIKCRVLRSDPAARRLSLSFITTSSRDDASEGAAGDELIGKVVAGTVHHVNDSVIIVNV 565 Query: 471 A---DGVEGYLRASEASR--DRVEDATLVLSVG-DEVEAKFTGVDRKNRAISLSVRAK 522 + V+GYL S +E V VG V + + +S + Sbjct: 566 STPTGLVKGYLTFPHLSDTLGHIEQLKSVTKVGFQFDRLLVLDV-TDKQKLIVSAKQS 622 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 97/530 (18%), Positives = 186/530 (35%), Gaps = 46/530 (8%) Query: 26 GVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL------EIQVGDEVDVALDAVE--- 76 G V I+ +++ + AE+ VG V + +E Sbjct: 5 GAVAEINNKDMVISLPGGLRGFVLAEEASEVFENEVPLLSDLFSVGQLVACTVRKLELTQ 64 Query: 77 --DGFGETLL---SREKAKRHEAWITLEKAYE--------DAETVTGVINGKVKGGFTVE 123 G G+ + ++ +R E + L Y+ + + +T V+ G+ + Sbjct: 65 EKKGRGKPEKEGKNEKRGRRIELSLKLGYLYDGLSIEAVYEGQALTAVVTSIEDHGYLLS 124 Query: 124 LNGIRAFLPGSLVDVRPVRDTLHL-EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 G+ A + G L+ + T L G+ ++ VI +D+KR V + + S N + Sbjct: 125 F-GVPA-VSGFLLHRNYLDGTSKLRTGQLVQGVVISVDKKRGAVGLKADLGLISSNMVKE 182 Query: 183 DQ--LLENLQEGMEVKGIVKNLTDYGAFVD-LGGVDGLLHITDMAWK-RVKHPSEIVNVG 238 +E L G V V+++ G + L G + I + + + Sbjct: 183 FAGLTVELLTPGAMVNARVRSVLKNGLLLSFLTYFTGTVDIFHLEDPLPGADWNTKYSEN 242 Query: 239 DEITVKVLKFDRERTRVSLGL-KQLGEDPWVAIAKRYPEGTKLTGRVTNLTD--YGCFVE 295 + ++L D + L L QL + V + G + D G +E Sbjct: 243 QRLKARILYIDPVAKTIGLTLNPQLLNN--VLPSMSVDVGDVFKDAIVRRVDATIGMLLE 300 Query: 296 I---EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN 352 + E V G + S + + K VG V V+ LK+ + Sbjct: 301 LPTKENVVAGYI--SSVSDEH-IAKLEKKYTVGKKVRARVIGHRVMDALAIASLKESVVD 357 Query: 353 PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKG 412 V G + ++ +G + L G+ L L +S +++ G Sbjct: 358 QLLLSHADVQPAMNVTGTVIAVEPYGALVQLAEGVKALCPLQHMS-EFQRSNPSSKFQVG 416 Query: 413 DEIAAVVLQVDAERERISLGVKQL----AEDPFNNWVALNKKGAIVTGKVTAVDAKGATV 468 ++ VL D ++I+L K+ P ++ + +G + G +T ++ G V Sbjct: 417 SKLKFRVLSCDHHAKKITLTHKKTLITSKLSPIVSYESAV-EGLVTHGFITGIEDIGCFV 475 Query: 469 ELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLS 518 + V+G + S + A V VG ++ + D R +SLS Sbjct: 476 SFYNDVKGLVHKSALGIEAGVKAENVFQVGQSIKCRVLRSDPAARRLSLS 525 Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats. Identities = 84/409 (20%), Positives = 156/409 (38%), Gaps = 52/409 (12%) Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKR--VKHPSEIVNVGDEIT 242 LE L G + V+ + D A++ + + G L I D + ++ +E VG ++ Sbjct: 1010 LEELVPGQCITAYVQEVKDDWAWLSVAPHLRGRLFILDSSTDPSELEKFAERFTVGTPVS 1069 Query: 243 VKVLKFDRERTRV--------SLGLKQLGEDPWVAIAKRYPE-----------GTKLTGR 283 V D E+ + L K L + P + A E G L GR Sbjct: 1070 CCVKSVDYEKRTLDFIRRQPPQLQEKSLFDVPPMEDADSSSENNTKQVFWIQKGDSLGGR 1129 Query: 284 VTNLTDY--GCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDE---E 338 V + G V+I G VHV+ + K+ +P+ G V +VL +++ Sbjct: 1130 VKQVNPGVGGISVQIAPSSFGRVHVTHLSDEWKD-NPASAFKEGQFVRCVVLGVEKNPNG 1188 Query: 339 RRRISLGLKQCKANPWQQFAETHNKGD----------------RVEGKIKSITDFGIFIG 382 + I L L++ + + ++G +KS + G FI Sbjct: 1189 KTVIDLTLRKSLGGMVAANLQASDSATTRCVKFQCRTIKPLCLVLQGFVKSTSKKGCFIS 1248 Query: 383 LDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVK------QL 436 L +D +V ++S ++ + G I ++ +DA+ R+ + +K +L Sbjct: 1249 LAPQVDAIVLTCNLS-KAFVKDPAESFPPGKLIKGRIINIDADLGRVEMSLKTSGQKKEL 1307 Query: 437 AEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADG-VEGYLRASEASRDRVEDATLVL 495 K+G +V G + ++ G V + V SE + +D Sbjct: 1308 TSTLLGRRFGDFKEGEVVFGTIKRIEKFGIFVTIEQSSVVTMCHMSEVADHYFKDIDKHY 1367 Query: 496 SVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSN 544 VGD V A+ VD + ISL ++ ++ + + V +++D +N Sbjct: 1368 KVGDRVRARVLKVDNTKQRISLGLKESYFSNTETHVQPVTEEDDMKVTN 1416 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 104/600 (17%), Positives = 214/600 (35%), Gaps = 77/600 (12%) Query: 13 LKEIETRPGSIVRGVVVAIDKDVVLVDA--GLKSESAI-PAEQFKNAQGELEIQVGDEVD 69 L + +P V G V+A++ LV G+K+ + +F+ + + QVG ++ Sbjct: 361 LSHADVQPAMNVTGTVIAVEPYGALVQLAEGVKALCPLQHMSEFQRSNPSSKFQVGSKLK 420 Query: 70 VALDAVEDGFGETLLSREKAKRHEAWITL--EKAYEDAETVTGVINGKVK-GGFTVELNG 126 + + + + L+ +K + ++ + G I G G F N Sbjct: 421 FRVLSCDHHAKKITLTHKKTLITSKLSPIVSYESAVEGLVTHGFITGIEDIGCFVSFYND 480 Query: 127 IRAFLPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQ 184 ++ + S + + ++ G+ ++ +V++ D + +S + S + Sbjct: 481 VKGLVHKSALGIEAGVKAENVFQVGQSIKCRVLRSDPAARRLSLS--FITTSSRDDASEG 538 Query: 185 LLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLL-------HITDMAWKRVKHPSEIVNV 237 + G V G V ++ D V++ GL+ H++D ++ + V Sbjct: 539 AAGDELIGKVVAGTVHHVNDSVIIVNVSTPTGLVKGYLTFPHLSD-TLGHIEQLKSVTKV 597 Query: 238 GDEITVKVLKFD-RERTRVSLGLKQLG---EDPWVAIAKRYPEGTKLTGRVTNLTDYGCF 293 G + ++L D ++ ++ + KQ + + + + G V N+TD GCF Sbjct: 598 GFQFD-RLLVLDVTDKQKLIVSAKQSLLQAASSLPSDISQLQPQSVIPGYVANITDRGCF 656 Query: 294 VEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQ----- 348 V + GL V ++ PS +VG V VL++ + + SL LKQ Sbjct: 657 VRFLGRLTGLASVPQVADEF-VSDPSNHFSVGQSVRAQVLEVYHDTGKFSLCLKQSVCFS 715 Query: 349 ------------------CKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDG--GID 388 ++A+T G G+++ I D+G+ + L + Sbjct: 716 TDVSLIQGYFLEEDKIVEASEASDLEWAKTLAIGACTGGEVQEIKDYGVIVKLPNYKDVV 775 Query: 389 GLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQ--LAEDPFNNWVA 446 G V + + GD + A VL V + L V+ L + ++ Sbjct: 776 GFV---------THYQLGTPVEVGDSVQARVLDVVKADRIVDLTVRPELLQVNKHDSTKK 826 Query: 447 LNKKG------------AIVTGKVTAVDAKGATVELAD--GVEGYLRASEASRDRVEDAT 492 K V+ + V + L + G+ A + R +D+ Sbjct: 827 KEKNKKRSHPVMALELHQKVSAVIELVKDAYLVLSLPEQGNAIGFAAAGD-YNSRRQDSH 885 Query: 493 LVLSVGDEVEAKFTGV--DRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEA 550 S G V A + + + L + ++ E T + + + A+ +A Sbjct: 886 QRYSPGQRVVATVEHLGDETNGNRMLLLLSNTGDSVEVKTSNTKKPRRELDKLIGAIVDA 945 Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats. Identities = 79/446 (17%), Positives = 157/446 (35%), Gaps = 43/446 (9%) Query: 108 VTGVINGKVKGGFTVEL-NGIRAFLPGSLVDVRPVRDTLHL-----EGKELEFKVIKLD- 160 + G + + L G+R F+ + L G+ + V KL+ Sbjct: 3 IWGAVAEINNKDMVISLPGGLRGFVLAEEASEVFENEVPLLSDLFSVGQLVACTVRKLEL 62 Query: 161 QKRNNVVVSRRAVIESENSAERDQL------------LENLQEGMEVKGIVKNLTDYGAF 208 + ++E R +L +E + EG + +V ++ D+G Sbjct: 63 TQEKKGRGKPEKEGKNEKRGRRIELSLKLGYLYDGLSIEAVYEGQALTAVVTSIEDHGYL 122 Query: 209 VDLG--GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSL-------GL 259 + G V G L + + + G + V+ D++R V L Sbjct: 123 LSFGVPAVSGFL-----LHRNYLDGTSKLRTGQLVQGVVISVDKKRGAVGLKADLGLISS 177 Query: 260 KQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPS 319 + E + + P G + RV ++ G + G V + ++ + Sbjct: 178 NMVKEFAGLTVELLTP-GAMVNARVRSVLKNGLLLSFLTYFTGTVDIFHLEDPLPGADWN 236 Query: 320 KVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDF-- 377 + ++ +L ID + I L L N + + + GD + I D Sbjct: 237 TKYSENQRLKARILYIDPVAKTIGLTLNPQLLN-NVLPSMSVDVGDVFKDAIVRRVDATI 295 Query: 378 GIFIGL---DGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVK 434 G+ + L + + G + S +S + ++Y G ++ A V+ +K Sbjct: 296 GMLLELPTKENVVAGYI--SSVSDEHIAK-LEKKYTVGKKVRARVIGHRVMDALAIASLK 352 Query: 435 QLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLV 494 + D A + VTG V AV+ GA V+LA+GV+ S + + + Sbjct: 353 ESVVDQLLLSHADVQPAMNVTGTVIAVEPYGALVQLAEGVKALCPLQHMSEFQRSNPSSK 412 Query: 495 LSVGDEVEAKFTGVDRKNRAISLSVR 520 VG +++ + D + I+L+ + Sbjct: 413 FQVGSKLKFRVLSCDHHAKKITLTHK 438 Score = 94.3 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 96/604 (15%), Positives = 194/604 (32%), Gaps = 92/604 (15%) Query: 21 GSIVRGVVVAIDKDVVLVDAGLKS---ESAIPAEQFKNAQGELE-----IQVGDEVDVAL 72 G +V G V ++ V++V+ + + + + G +E +VG + D L Sbjct: 546 GKVVAGTVHHVNDSVIIVNVSTPTGLVKGYLTFPHLSDTLGHIEQLKSVTKVGFQFDRLL 605 Query: 73 DAVEDGFGETLLSREK--AKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNG-IRA 129 + ++S ++ + + + + + G + G V G + Sbjct: 606 VLDVTDKQKLIVSAKQSLLQAASSLPSDISQLQPQSVIPGYVANITDRGCFVRFLGRLTG 665 Query: 130 FLPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRAV-------------- 173 V V D + G+ + +V+++ + + Sbjct: 666 LASVPQVADEFVSDPSNHFSVGQSVRAQVLEVYHDTGKFSLCLKQSVCFSTDVSLIQGYF 725 Query: 174 -----IESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG---VDGLLHITDMAW 225 I + A + + L G G V+ + DYG V L V G + Sbjct: 726 LEEDKIVEASEASDLEWAKTLAIGACTGGEVQEIKDYGVIVKLPNYKDVVGFV-----TH 780 Query: 226 KRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLK-QLGEDPWVAIAKRYPEGTKLTGRV 284 ++ P V VGD + +VL + V L ++ +L + K+ + K + V Sbjct: 781 YQLGTP---VEVGDSVQARVLDVVKADRIVDLTVRPELLQVNKHDSTKKKEKNKKRSHPV 837 Query: 285 TNL---TDYGCFVEIEEGVEGLVHVSE----------MDWTNKNIHPSKVVNVGDVVEVM 331 L +E+ + ++ + E D+ ++ + + G V Sbjct: 838 MALELHQKVSAVIELVKDAYLVLSLPEQGNAIGFAAAGDYNSRRQDSHQRYSPGQRVVAT 897 Query: 332 V--LDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDG 389 V L + R+ L L + + + T ++ I G + IDG Sbjct: 898 VEHLGDETNGNRMLLLLSNTGDSVEVKTSNTKKPRRELDKLI------GAIVD-AEIIDG 950 Query: 390 LVHLSDISWNVAGEEAVREYKKGDEIAAVV-----LQVDAERER----ISLGVKQLAEDP 440 + + + G ++ V LQ R+ + L ++ Sbjct: 951 F----------EEKNPLSSFNIGQKVRCRVVQRVRLQKSPGRKERTSVLELSLRPSQLSG 1000 Query: 441 FNNW-----VALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDR--VEDATL 493 + + G +T V V A + +A + G L ++S D +E Sbjct: 1001 YTRPGSLPSLEELVPGQCITAYVQEVKDDWAWLSVAPHLRGRLFILDSSTDPSELEKFAE 1060 Query: 494 VLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKA 553 +VG V VD + R + R + EK ++ + S N + F Sbjct: 1061 RFTVGTPVSCCVKSVDYEKRTLDFIRRQPPQLQEKSLFDVPPMEDADSSSENNTKQVFWI 1120 Query: 554 AKGE 557 KG+ Sbjct: 1121 QKGD 1124 Score = 43.8 bits (102), Expect = 0.016, Method: Composition-based stats. Identities = 14/94 (14%), Positives = 35/94 (37%), Gaps = 4/94 (4%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKS-ESAIPAEQFKNA---QGELEIQVGDEVDVAL 72 + + G +V G + I+K + V S + + + + +VGD V + Sbjct: 1318 DFKEGEVVFGTIKRIEKFGIFVTIEQSSVVTMCHMSEVADHYFKDIDKHYKVGDRVRARV 1377 Query: 73 DAVEDGFGETLLSREKAKRHEAWITLEKAYEDAE 106 V++ L +++ ++ E+ + Sbjct: 1378 LKVDNTKQRISLGLKESYFSNTETHVQPVTEEDD 1411 >UniRef50_B1XJQ5 30S ribosomal protein S1 like protein n=1 Tax=Synechococcus sp. PCC 7002 RepID=B1XJQ5_SYNP2 Length = 296 Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats. Identities = 77/286 (26%), Positives = 128/286 (44%), Gaps = 15/286 (5%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK---NAQG 58 + F E + + G +V G + D VLVD G KS P Sbjct: 13 MDDFEHALTE--HDYQFEQGQVVTGKIFEHLSDGVLVDIGGKSPGFSPLRDALLAGETDA 70 Query: 59 ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 + VG+ V+ + ++ G+ LSR K W L +A E +V + G +G Sbjct: 71 HTALPVGENVEFLIVRGQNAEGQVTLSRRKLAEQRVWEDLAQAAEAGNSVQMRVTGSNRG 130 Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 G T ++ G+R F+P S + + + D L G+ L ++ DQ+R +V+S+R Sbjct: 131 GVTGDIQGLRGFIPNSHLVDKNIDD---LMGQLLTVNFLEFDQERRKLVLSQR------- 180 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVG 238 A + +++ L G V G V N+ YG FV+L G+ GLLH + ++ K V+ + ++G Sbjct: 181 YAAQAEVMRRLSIGALVSGTVVNIKPYGVFVELDGMTGLLHRSQISAKPVEQIEALFSIG 240 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRV 284 + V + + R+SL L+ L + P I + T RV Sbjct: 241 QTVRVLITDIEESNNRISLSLQALEKFPGEVIEQFDAVQTNAEERV 286 Score = 141 bits (356), Expect = 7e-32, Method: Composition-based stats. Identities = 62/274 (22%), Positives = 115/274 (41%), Gaps = 14/274 (5%) Query: 188 NLQEGMEVKGIVKNLTDYGAFVDLGGVD-GLLHITDMAWKRVKHPSEIVNVGDEITVKVL 246 ++G V G + G VD+GG G + D + VG+ + ++ Sbjct: 26 QFEQGQVVTGKIFEHLSDGVLVDIGGKSPGFSPLRDALLAGETDAHTALPVGENVEFLIV 85 Query: 247 KFDRERTRVSLGLKQLGEDP-WVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVH 305 + +V+L ++L E W +A+ G + RVT G +I+ G+ G + Sbjct: 86 RGQNAEGQVTLSRRKLAEQRVWEDLAQAAEAGNSVQMRVTGSNRGGVTGDIQ-GLRGFIP 144 Query: 306 VSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGD 365 S + +KNI +G ++ V L+ D+ERR++ L + + + G Sbjct: 145 NSHL--VDKNIDDL----MGQLLTVNFLEFDQERRKLVLSQRYA---AQAEVMRRLSIGA 195 Query: 366 RVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAE 425 V G + +I +G+F+ LD G+ GL+H S IS E+ + G + ++ ++ Sbjct: 196 LVSGTVVNIKPYGVFVELD-GMTGLLHRSQISAKPV-EQIEALFSIGQTVRVLITDIEES 253 Query: 426 RERISLGVKQLAEDPFNNWVALNKKGAIVTGKVT 459 RISL ++ L + P + +V Sbjct: 254 NNRISLSLQALEKFPGEVIEQFDAVQTNAEERVE 287 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 55/271 (20%), Positives = 111/271 (40%), Gaps = 14/271 (5%) Query: 255 VSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNK 314 ++ + E ++ +G +TG++ G V+I G + + + Sbjct: 9 IAFSM-DDFEHALTEHDYQFEQGQVVTGKIFEHLSDGVLVDIGGKSPGFSPLRDALLAGE 67 Query: 315 NIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQ-CKANPWQQFAETHNKGDRVEGKIKS 373 + VG+ VE +++ +++L ++ + W+ A+ G+ V+ ++ Sbjct: 68 -TDAHTALPVGENVEFLIVRGQNAEGQVTLSRRKLAEQRVWEDLAQAAEAGNSVQMRVTG 126 Query: 374 ITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGV 433 G+ + G+ G + S + + G + L+ D ER ++ L Sbjct: 127 SNRGGVTGDIQ-GLRGFIPNSHLVDKNIDD------LMGQLLTVNFLEFDQERRKLVLSQ 179 Query: 434 KQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATL 493 + A+ + GA+V+G V + G VEL DG+ G L S+ S VE Sbjct: 180 RYAAQ---AEVMRRLSIGALVSGTVVNIKPYGVFVEL-DGMTGLLHRSQISAKPVEQIEA 235 Query: 494 VLSVGDEVEAKFTGVDRKNRAISLSVRAKDE 524 + S+G V T ++ N ISLS++A ++ Sbjct: 236 LFSIGQTVRVLITDIEESNNRISLSLQALEK 266 Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats. Identities = 67/298 (22%), Positives = 125/298 (41%), Gaps = 16/298 (5%) Query: 78 GFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIR-AFLPGS-- 134 ++ A + +E + VTG I + G V++ G F P Sbjct: 3 AEPNPAIAFSMDDFEHALTEHDYQFEQGQVVTGKIFEHLSDGVLVDIGGKSPGFSPLRDA 62 Query: 135 LVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGME 194 L+ T G+ +EF +++ V +SRR + E + L + + G Sbjct: 63 LLAGETDAHTALPVGENVEFLIVRGQNAEGQVTLSRRKLAEQRV---WEDLAQAAEAGNS 119 Query: 195 VKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTR 254 V+ V G D+ G+ G + + + K + +G +TV L+FD+ER + Sbjct: 120 VQMRVTGSNRGGVTGDIQGLRGFIPNSHLVDKNIDDL-----MGQLLTVNFLEFDQERRK 174 Query: 255 VSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNK 314 + L + + + +R G ++G V N+ YG FVE+ +G+ GL+H S++ Sbjct: 175 LVLSQRYAAQ---AEVMRRLSIGALVSGTVVNIKPYGVFVEL-DGMTGLLHRSQIS-AKP 229 Query: 315 NIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIK 372 + ++G V V++ DI+E RISL L+ + P + + E +++ Sbjct: 230 VEQIEALFSIGQTVRVLITDIEESNNRISLSLQALEKFPGEVIEQFDAVQTNAEERVE 287 Score = 71.5 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 69/168 (41%), Gaps = 8/168 (4%) Query: 360 THNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVV 419 +G V GKI G+ + + G G L D + +A G+ + ++ Sbjct: 26 QFEQGQVVTGKIFEHLSDGVLVDIGGKSPGFSPLRD-ALLAGETDAHTALPVGENVEFLI 84 Query: 420 LQVDAERERISLGVKQLAEDP-FNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYL 478 ++ +++L ++LAE + + + G V +VT + G T ++ G+ G++ Sbjct: 85 VRGQNAEGQVTLSRRKLAEQRVWEDLAQAAEAGNSVQMRVTGSNRGGVTGDIQ-GLRGFI 143 Query: 479 RASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEAD 526 S ++D G + F D++ R + LS R +A+ Sbjct: 144 PNSHLVDKNIDDLM-----GQLLTVNFLEFDQERRKLVLSQRYAAQAE 186 Score = 50.7 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 36/91 (39%) Query: 447 LNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFT 506 ++G +VTGK+ + G V++ G+ +A DA L VG+ VE Sbjct: 26 QFEQGQVVTGKIFEHLSDGVLVDIGGKSPGFSPLRDALLAGETDAHTALPVGENVEFLIV 85 Query: 507 GVDRKNRAISLSVRAKDEADEKDAIATVNKQ 537 ++LS R E + +A + Sbjct: 86 RGQNAEGQVTLSRRKLAEQRVWEDLAQAAEA 116 >UniRef50_O33698 30S ribosomal protein S1 n=12 Tax=Cyanobacteria RepID=RS1_SYNE7 Length = 295 Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats. Identities = 73/269 (27%), Positives = 124/269 (46%), Gaps = 14/269 (5%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA---QGE 59 + FA E + ++++ G +VRG V D +D G K+ + +P + E Sbjct: 12 DDFALALEA--QSLDSQKGQLVRGKVCEYSTDGAYIDIGGKAPAFLPKREAALHAVLDLE 69 Query: 60 LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGG 119 + +E++ + ++ G+ +S +AW + + E +TV + G KGG Sbjct: 70 AHLPKDEELEFLVIRDQNEDGQVTVSLRALALEQAWTRVAELQEGGQTVQVKVTGSNKGG 129 Query: 120 FTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 T +L G+RAF+P S ++ + D L+GK L +++++ +V+S R Sbjct: 130 VTADLEGLRAFIPRSHLNEK--EDLDSLKGKTLTVAFLEVNRADKKLVLSER-------Q 180 Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGD 239 A R L+ ++ G + G V L +G FVDLGG LL I ++ K V I +GD Sbjct: 181 AARTALVREIEVGQLINGKVTGLKPFGVFVDLGGATALLPINQISQKFVADVGAIFKIGD 240 Query: 240 EITVKVLKFDRERTRVSLGLKQLGEDPWV 268 I V+ D + R+SL K L P Sbjct: 241 PIQALVVAIDNTKGRISLSTKVLENHPGE 269 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 62/253 (24%), Positives = 114/253 (45%), Gaps = 13/253 (5%) Query: 190 QEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKF 248 Q+G V+G V + GA++D+GG L + A V + +E+ V++ Sbjct: 26 QKGQLVRGKVCEYSTDGAYIDIGGKAPAFLPKREAALHAVLDLEAHLPKDEELEFLVIRD 85 Query: 249 DRERTRVSLGLKQL-GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVS 307 E +V++ L+ L E W +A+ G + +VT G ++E G+ + S Sbjct: 86 QNEDGQVTVSLRALALEQAWTRVAELQEGGQTVQVKVTGSNKGGVTADLE-GLRAFIPRS 144 Query: 308 EMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRV 367 ++ +++ K G + V L+++ +++ L +Q + E G + Sbjct: 145 HLN-EKEDLDSLK----GKTLTVAFLEVNRADKKLVLSERQAARTALVREIE---VGQLI 196 Query: 368 EGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERE 427 GK+ + FG+F+ L GG L+ ++ IS + +K GD I A+V+ +D + Sbjct: 197 NGKVTGLKPFGVFVDL-GGATALLPINQISQKFVAD-VGAIFKIGDPIQALVVAIDNTKG 254 Query: 428 RISLGVKQLAEDP 440 RISL K L P Sbjct: 255 RISLSTKVLENHP 267 Score = 128 bits (323), Expect = 5e-28, Method: Composition-based stats. Identities = 49/250 (19%), Positives = 101/250 (40%), Gaps = 12/250 (4%) Query: 275 PEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLD 334 +G + G+V + G +++I + E + + + + +E +V+ Sbjct: 26 QKGQLVRGKVCEYSTDGAYIDIGGKAPAFLPKREAAL-HAVLDLEAHLPKDEELEFLVIR 84 Query: 335 IDEERRRISLGLKQ-CKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHL 393 E ++++ L+ W + AE G V+ K+ G+ L+ G+ + Sbjct: 85 DQNEDGQVTVSLRALALEQAWTRVAELQEGGQTVQVKVTGSNKGGVTADLE-GLRAFIPR 143 Query: 394 SDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAI 453 S ++ + KG + L+V+ +++ L +Q A V + G + Sbjct: 144 SHLNEKEDLDSL-----KGKTLTVAFLEVNRADKKLVLSERQAAR---TALVREIEVGQL 195 Query: 454 VTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNR 513 + GKVT + G V+L G L ++ S+ V D + +GD ++A +D Sbjct: 196 INGKVTGLKPFGVFVDLG-GATALLPINQISQKFVADVGAIFKIGDPIQALVVAIDNTKG 254 Query: 514 AISLSVRAKD 523 ISLS + + Sbjct: 255 RISLSTKVLE 264 Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats. Identities = 61/260 (23%), Positives = 107/260 (41%), Gaps = 15/260 (5%) Query: 103 EDAETVTGVINGKVKGGFTVELNG-IRAFLPGSLVDVRPVRDTLHLEGK--ELEFKVIKL 159 + + V G + G +++ G AFLP + V D K ELEF VI+ Sbjct: 26 QKGQLVRGKVCEYSTDGAYIDIGGKAPAFLPKREAALHAVLDLEAHLPKDEELEFLVIRD 85 Query: 160 DQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLH 219 + V VS RA+ + +L E G V+ V G DL G+ + Sbjct: 86 QNEDGQVTVSLRALALEQAWTRVAELQEG---GQTVQVKVTGSNKGGVTADLEGLRAFIP 142 Query: 220 ITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTK 279 + + K + G +TV L+ +R ++ L +Q A+ + G Sbjct: 143 RSHLNEKEDLDSLK----GKTLTVAFLEVNRADKKLVLSERQAART---ALVREIEVGQL 195 Query: 280 LTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEER 339 + G+VT L +G FV++ G L+ ++++ + +GD ++ +V+ ID + Sbjct: 196 INGKVTGLKPFGVFVDLG-GATALLPINQIS-QKFVADVGAIFKIGDPIQALVVAIDNTK 253 Query: 340 RRISLGLKQCKANPWQQFAE 359 RISL K + +P + Sbjct: 254 GRISLSTKVLENHPGEILEN 273 Score = 48.0 bits (113), Expect = 8e-04, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 38/88 (43%) Query: 449 KKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGV 508 +KG +V GKV GA +++ +L EA+ V D L +E+E Sbjct: 26 QKGQLVRGKVCEYSTDGAYIDIGGKAPAFLPKREAALHAVLDLEAHLPKDEELEFLVIRD 85 Query: 509 DRKNRAISLSVRAKDEADEKDAIATVNK 536 ++ +++S+RA +A + + Sbjct: 86 QNEDGQVTVSLRALALEQAWTRVAELQE 113 >UniRef50_A9KQA3 RNA binding S1 domain protein n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KQA3_CLOPH Length = 303 Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats. Identities = 87/267 (32%), Positives = 142/267 (53%), Gaps = 9/267 (3%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ---G 58 + F E SLK + G +V+G V+ I V VD SE I E+ N Sbjct: 8 MDDFKTELEHSLKRLT--EGDLVKGTVIGISDTEVTVDLSYSSEGIIKLEELSNDPRFSI 65 Query: 59 ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 + ++ +G+E+ + + ED G LLS++KA +W L+ + T ++ V G Sbjct: 66 KADVTIGEEITAMILS-EDKEGNLLLSKKKADDILSWDKLKTMMTERTVTTVKVSNAVNG 124 Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 G L GIRAF+P S++ + V D GK L+ VI D++ N +V+S + V+ E Sbjct: 125 GVVTYLEGIRAFIPASMLSLSYVEDVSTFVGKVLKVIVITADKEANKLVLSAKEVLREEE 184 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNV 237 + E+ + +Q+G+ GIV L +GAFV +G G+ GL+HI+ + KR+K P+E++ Sbjct: 185 AKEKSHKISQVQKGIVTTGIVDKLMPFGAFVSIGEGLSGLVHISQICGKRIKSPAEVLKE 244 Query: 238 GDEITVKVLKFDRERTRVSLGLKQLGE 264 G E+ VKVL D + ++SL +K + + Sbjct: 245 GQEVKVKVL--DVKDGKISLSIKAVSD 269 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 64/287 (22%), Positives = 127/287 (44%), Gaps = 18/287 (6%) Query: 276 EGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDI 335 EG + G V ++D V++ EG++ + E+ + + V +G+ + M+L Sbjct: 24 EGDLVKGTVIGISDTEVTVDLSYSSEGIIKLEELSNDPRFSIKAD-VTIGEEITAMILSE 82 Query: 336 DEERRRISLGLKQCKA-NPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLS 394 D+E + L K+ W + + K+ + + G+ L+ GI + S Sbjct: 83 DKEGN-LLLSKKKADDILSWDKLKTMMTERTVTTVKVSNAVNGGVVTYLE-GIRAFIPAS 140 Query: 395 DISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDP----FNNWVALNKK 450 +S + + + G + +V+ D E ++ L K++ + ++ ++ +K Sbjct: 141 MLSLSYVEDVSTF---VGKVLKVIVITADKEANKLVLSAKEVLREEEAKEKSHKISQVQK 197 Query: 451 GAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDR 510 G + TG V + GA V + +G+ G + S+ R++ VL G EV+ K D Sbjct: 198 GIVTTGIVDKLMPFGAFVSIGEGLSGLVHISQICGKRIKSPAEVLKEGQEVKVKVL--DV 255 Query: 511 KNRAISLSVRAKDEADE--KDAI---ATVNKQEDANFSNNAMAEAFK 552 K+ ISLS++A +A+E +DA+ A + E + + FK Sbjct: 256 KDGKISLSIKAVSDAEEVHEDAVDIPAEYSTGEQVTTGLGDLLKNFK 302 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 71/296 (23%), Positives = 130/296 (43%), Gaps = 14/296 (4%) Query: 168 VSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWK 226 + + + E + L+ L EG VKG V ++D VDL +G++ + +++ Sbjct: 1 MDETNLTMDDFKTELEHSLKRLTEGDLVKGTVIGISDTEVTVDLSYSSEGIIKLEELSND 60 Query: 227 RVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGED-PWVAIAKRYPEGTKLTGRVT 285 V +G+EIT +L D+E + L K+ + W + E T T +V+ Sbjct: 61 PRFSIKADVTIGEEITAMILSEDKEGN-LLLSKKKADDILSWDKLKTMMTERTVTTVKVS 119 Query: 286 NLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLG 345 N + G V EG+ + S + + + V G V++V+V+ D+E ++ L Sbjct: 120 NAVNGGV-VTYLEGIRAFIPASMLSLSYVEDVSTFV---GKVLKVIVITADKEANKLVLS 175 Query: 346 ----LKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVA 401 L++ +A KG G + + FG F+ + G+ GLVH+S I Sbjct: 176 AKEVLREEEAKEKSHKISQVQKGIVTTGIVDKLMPFGAFVSIGEGLSGLVHISQIC-GKR 234 Query: 402 GEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGK 457 + K+G E+ VL D + +ISL +K +++ + A++ TG+ Sbjct: 235 IKSPAEVLKEGQEVKVKVL--DVKDGKISLSIKAVSDAEEVHEDAVDIPAEYSTGE 288 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 59/257 (22%), Positives = 110/257 (42%), Gaps = 16/257 (6%) Query: 102 YEDAETVTGVINGKVKGGFTVELN-GIRAFLPGSLV--DVRPVRDTLHLEGKELEFKVIK 158 + + V G + G TV+L+ + + D R G+E+ ++ Sbjct: 22 LTEGDLVKGTVIGISDTEVTVDLSYSSEGIIKLEELSNDPRFSIKADVTIGEEITAMILS 81 Query: 159 LDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLL 218 D++ N ++ ++A ++ D+L + E V N + G L G+ + Sbjct: 82 EDKEGNLLLSKKKA----DDILSWDKLKTMMTERTVTTVKVSNAVNGGVVTYLEGIRAFI 137 Query: 219 HITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRY---- 274 + ++ V+ S VG + V V+ D+E ++ L K++ + Sbjct: 138 PASMLSLSYVEDVSTF--VGKVLKVIVITADKEANKLVLSAKEVLREEEAKEKSHKISQV 195 Query: 275 PEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLD 334 +G TG V L +G FV I EG+ GLVH+S++ + P++V+ G V+V VLD Sbjct: 196 QKGIVTTGIVDKLMPFGAFVSIGEGLSGLVHISQI-CGKRIKSPAEVLKEGQEVKVKVLD 254 Query: 335 IDEERRRISLGLKQCKA 351 + + +ISL +K Sbjct: 255 V--KDGKISLSIKAVSD 269 Score = 51.1 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 44/105 (41%), Gaps = 1/105 (0%) Query: 442 NNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEV 501 + + +G +V G V + TV+L+ EG ++ E S D +++G+E+ Sbjct: 16 EHSLKRLTEGDLVKGTVIGISDTEVTVDLSYSSEGIIKLEELSNDPRFSIKADVTIGEEI 75 Query: 502 EAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNA 546 A D++ + LS + D+ D + T+ + + Sbjct: 76 TAMILSEDKEGN-LLLSKKKADDILSWDKLKTMMTERTVTTVKVS 119 >UniRef50_C4FZ56 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4FZ56_ABIDE Length = 305 Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats. Identities = 88/304 (28%), Positives = 156/304 (51%), Gaps = 13/304 (4%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQG--- 58 + + E+S K + R G +V+G V+ + + V VD G +E +P ++ N Sbjct: 10 MDDYLDELEQSFKRL--REGDLVKGPVIGVGETEVTVDLGSYAEGIVPIDELSNDPKFSI 67 Query: 59 ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 + +I VGD V+ + + ++G+G+ LLS ++A AW L A E + I VK Sbjct: 68 KADIAVGDVVNAMVLSADNGYGQVLLSIKRADNILAWDFLADAKESGQVFNVKITEAVKA 127 Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 G L GIRAF+P S + + V +T GK + ++I++D+ +V+S ++V+ E Sbjct: 128 GAVTYLKGIRAFIPASGLALEYVENTEDFVGKHISVRIIEVDEDDKKLVLSAKSVLREEE 187 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNV 237 + + ++ + + G V G V+ L +YGAFV L G+ GL+HI+ M+ +R+KHP E+V+ Sbjct: 188 AKKTEEKMSKVAIGTVVTGKVERLENYGAFVRLPDGLSGLVHISQMSERRIKHPKEVVSE 247 Query: 238 GDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE 297 DE+ V + D + ++SL + + E V P T F ++ Sbjct: 248 NDEVKVMI--TDIKDGKLSLSMTKAVESEVVDDTDSIPVEYSTGDSPTT-----SFADLL 300 Query: 298 EGVE 301 +G++ Sbjct: 301 KGIK 304 Score = 147 bits (372), Expect = 8e-34, Method: Composition-based stats. Identities = 72/297 (24%), Positives = 125/297 (42%), Gaps = 13/297 (4%) Query: 265 DPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNV 324 D KR EG + G V + + V++ EG+V + E+ K + + V Sbjct: 15 DELEQSFKRLREGDLVKGPVIGVGETEVTVDLGSYAEGIVPIDELSNDPKFSIKAD-IAV 73 Query: 325 GDVVEVMVLDIDEERRRISLGLKQCK-ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGL 383 GDVV MVL D ++ L +K+ W A+ G KI G + Sbjct: 74 GDVVNAMVLSADNGYGQVLLSIKRADNILAWDFLADAKESGQVFNVKITEAVKAGA-VTY 132 Query: 384 DGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQL----AED 439 GI + S ++ E ++ G I+ +++VD + +++ L K + Sbjct: 133 LKGIRAFIPASGLALEYV--ENTEDF-VGKHISVRIIEVDEDDKKLVLSAKSVLREEEAK 189 Query: 440 PFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGD 499 ++ G +VTGKV ++ GA V L DG+ G + S+ S R++ V+S D Sbjct: 190 KTEEKMSKVAIGTVVTGKVERLENYGAFVRLPDGLSGLVHISQMSERRIKHPKEVVSEND 249 Query: 500 EVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSN-NAMAEAFKAAK 555 EV+ T + K+ +SLS+ E++ D ++ + S + A+ K K Sbjct: 250 EVKVMITDI--KDGKLSLSMTKAVESEVVDDTDSIPVEYSTGDSPTTSFADLLKGIK 304 Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats. Identities = 60/286 (20%), Positives = 120/286 (41%), Gaps = 13/286 (4%) Query: 171 RAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVK 229 + + E +Q + L+EG VKG V + + VDLG +G++ I +++ Sbjct: 6 KIESMDDYLDELEQSFKRLREGDLVKGPVIGVGETEVTVDLGSYAEGIVPIDELSNDPKF 65 Query: 230 HPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGED-PWVAIAKRYPEGTKLTGRVTNLT 288 + VGD + VL D +V L +K+ W +A G ++T Sbjct: 66 SIKADIAVGDVVNAMVLSADNGYGQVLLSIKRADNILAWDFLADAKESGQVFNVKITEAV 125 Query: 289 DYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLG--- 345 G V +G+ + S + + V G + V ++++DE+ +++ L Sbjct: 126 KAGA-VTYLKGIRAFIPASGLALEY-VENTEDFV--GKHISVRIIEVDEDDKKLVLSAKS 181 Query: 346 -LKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEE 404 L++ +A ++ G V GK++ + ++G F+ L G+ GLVH+S +S + Sbjct: 182 VLREEEAKKTEEKMSKVAIGTVVTGKVERLENYGAFVRLPDGLSGLVHISQMS-ERRIKH 240 Query: 405 AVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKK 450 + DE+ ++ D + ++SL + + E + Sbjct: 241 PKEVVSENDEVKVMIT--DIKDGKLSLSMTKAVESEVVDDTDSIPV 284 >UniRef50_P74142 30S ribosomal protein S1 homolog B n=14 Tax=Cyanobacteria RepID=RS1B_SYNY3 Length = 305 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 66/274 (24%), Positives = 130/274 (47%), Gaps = 14/274 (5%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQ---FKNAQGE 59 + FA+ ++ + G V G + + V VD G KS +P ++ +A+ E Sbjct: 13 DEFAKALDK--HDYHAEKGQTVHGKICQHANEGVYVDFGGKSPGFVPVQELGLRPHAEIE 70 Query: 60 LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGG 119 + D + + ++ G+ LSR + + ++W L + E +T+ V+ G KGG Sbjct: 71 DSFPLDSAWDFLVTSEQNDEGQVRLSRRQLQIQQSWENLAELEESGKTLEMVVTGTNKGG 130 Query: 120 FTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 ++ G+R F+P S + + L G+ L+ +++ +Q N +V+++R + Sbjct: 131 VVGDVEGLRGFIPRSHLM--HKDNMDALVGQVLKAHILEANQDNNKLVLTQRRI------ 182 Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGD 239 ++ + + + G +G V + YG FV++ GV GLLH++ ++ RV + + G Sbjct: 183 -QQAESMGKIAAGNIYEGKVAKIQPYGVFVEIEGVTGLLHVSQVSGTRVDSLNTLFAFGQ 241 Query: 240 EITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKR 273 I+V V + D + R+SL + L P + K Sbjct: 242 AISVYVQEIDEYKNRISLSTRILETYPGELVEKF 275 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 53/259 (20%), Positives = 108/259 (41%), Gaps = 13/259 (5%) Query: 190 QEGMEVKGIVKNLTDYGAFVDLGGVD-GLLHITDMAWKRVKHPSEIVNVGDEITVKVLKF 248 ++G V G + + G +VD GG G + + ++ + + + V Sbjct: 27 EKGQTVHGKICQHANEGVYVDFGGKSPGFVPVQELGLRPHAEIEDSFPLDSAWDFLVTSE 86 Query: 249 DRERTRVSLGLKQLG-EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVS 307 + +V L +QL + W +A+ G L VT G ++E G+ G + S Sbjct: 87 QNDEGQVRLSRRQLQIQQSWENLAELEESGKTLEMVVTGTNKGGVVGDVE-GLRGFIPRS 145 Query: 308 EMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRV 367 + + VG V++ +L+ +++ ++ L ++ + + G+ Sbjct: 146 HLMHKDNMDAL-----VGQVLKAHILEANQDNNKLVLTQRRIQ---QAESMGKIAAGNIY 197 Query: 368 EGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERE 427 EGK+ I +G+F+ ++ G+ GL+H+S +S + + G I+ V ++D + Sbjct: 198 EGKVAKIQPYGVFVEIE-GVTGLLHVSQVSGTRV-DSLNTLFAFGQAISVYVQEIDEYKN 255 Query: 428 RISLGVKQLAEDPFNNWVA 446 RISL + L P Sbjct: 256 RISLSTRILETYPGELVEK 274 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 47/257 (18%), Positives = 96/257 (37%), Gaps = 12/257 (4%) Query: 268 VAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDV 327 +G + G++ + G +V+ G V V E+ + + Sbjct: 20 DKHDYHAEKGQTVHGKICQHANEGVYVDFGGKSPGFVPVQEL-GLRPHAEIEDSFPLDSA 78 Query: 328 VEVMVLDIDEERRRISLGLKQCK-ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGG 386 + +V + ++ L +Q + W+ AE G +E + G+ ++ G Sbjct: 79 WDFLVTSEQNDEGQVRLSRRQLQIQQSWENLAELEESGKTLEMVVTGTNKGGVVGDVE-G 137 Query: 387 IDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVA 446 + G + S + + G + A +L+ + + ++ L +++ + + Sbjct: 138 LRGFIPRSHLMHKDNMDAL-----VGQVLKAHILEANQDNNKLVLTQRRIQQ---AESMG 189 Query: 447 LNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFT 506 G I GKV + G VE+ +GV G L S+ S RV+ + + G + Sbjct: 190 KIAAGNIYEGKVAKIQPYGVFVEI-EGVTGLLHVSQVSGTRVDSLNTLFAFGQAISVYVQ 248 Query: 507 GVDRKNRAISLSVRAKD 523 +D ISLS R + Sbjct: 249 EIDEYKNRISLSTRILE 265 Score = 46.5 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 31/103 (30%), Gaps = 4/103 (3%) Query: 439 DPFNNWVALNK----KGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLV 494 D F + + KG V GK+ +G V+ G++ E + Sbjct: 13 DEFAKALDKHDYHAEKGQTVHGKICQHANEGVYVDFGGKSPGFVPVQELGLRPHAEIEDS 72 Query: 495 LSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQ 537 + + T + LS R + +A + + Sbjct: 73 FPLDSAWDFLVTSEQNDEGQVRLSRRQLQIQQSWENLAELEES 115 >UniRef50_B0CR68 Predicted protein n=3 Tax=Agaricales RepID=B0CR68_LACBS Length = 1468 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 105/531 (19%), Positives = 202/531 (38%), Gaps = 47/531 (8%) Query: 62 IQVGDEVDVALDAVE--DGFGETLLSREKAKRHEAWITLEKAY--------------EDA 105 +VG V + A+ + L + + + +A +E + ++ Sbjct: 198 FRVGQYVRAVVSAIHAPGSSEASSLGKSRDETSKASRRVELSLVPERVNAGVQKADLKNG 257 Query: 106 ETVTGVINGKVKGGFTVELN--GIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKR 163 T+T + G+ ++L G+ FL +RP G+ L+ V KL Sbjct: 258 FTMTAAVKSVEDHGYILDLGISGVEGFLAFKDTKMRPSGSIALDVGRLLDVSVTKLSANG 317 Query: 164 NNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVD-LGGVDGLLHITD 222 V+ + S + + ++ G V+ ++ + G + LG +G + Sbjct: 318 RTCNVTTDQALFSSSYVTEMSSVTSVLPGALVQSLITAIHPTGLNLQVLGFFEGTVDPVH 377 Query: 223 MAWKRVKHPSEIVNVGDEITVKVL-KFDRERTRVSLGL-------------KQLGEDPWV 268 + K + VG ++ ++L ++ R +L L + Sbjct: 378 L-----KKGGKAYQVGKKVRARILYEYSSSPPRFALALVDHLTNLSAPCIKSKELPAETK 432 Query: 269 AIAKRYPEGTKLTG-RVTNL-TDYGCFVEIEEGVEGLVHVSEMDWTN-KNIHPSKVVNVG 325 +I + +P GT + +V + T+ G VE++ GVEG VH+S + + ++ + G Sbjct: 433 SIQEAFPLGTIIESAKVLRVETERGIIVEVQPGVEGFVHISHLSEDHVPSLSSTGPWKPG 492 Query: 326 DVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDG 385 + V + L K G+ ++G IK +TD G+F+ L Sbjct: 493 TLHRARVTGYFSFDGLLQLSFKPSIIEQKFLQVSDVEVGEVIKGTIKKLTDSGLFVSLSR 552 Query: 386 GIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAED---PFN 442 IDG+V + ++ + + +K G I VL VD R+RISL K+ D P Sbjct: 553 SIDGVV-WPNHYADITLKHPEKRFKPGAGIKCKVLAVDVYRKRISLTAKKTLLDSNLPIL 611 Query: 443 NWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVE 502 + + K G + + V VE + ++ + A E S + + +G V Sbjct: 612 SKIDDAKPGFVTHAVIFKVYGNHLLVEFYNNLKAIVPAKEISDIPINKLSDSFPIGRVVR 671 Query: 503 AKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKA 553 + VD + I S+R KD ++ ++ E N +++E K Sbjct: 672 TRIISVDTEQGRIVASIRQA--LGNKDPVSDISAVEIGNIVKGSISEIHKD 720 Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 100/552 (18%), Positives = 215/552 (38%), Gaps = 41/552 (7%) Query: 10 EESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQGELEIQVGD 66 ++ L+ + G +++G + + + V + + + + E + G Sbjct: 520 QKFLQVSDVEVGEVIKGTIKKLTDSGLFVSLSRSIDGVVWPNHYADITLKHPEKRFKPGA 579 Query: 67 EVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAE-TVTGVINGKVKGG-FTVEL 124 + + AV+ L+ +K L K + VT + KV G VE Sbjct: 580 GIKCKVLAVDVYRKRISLTAKKTLLDSNLPILSKIDDAKPGFVTHAVIFKVYGNHLLVEF 639 Query: 125 -NGIRAFLPGSLVDVRPVRDTLH--LEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 N ++A +P + P+ G+ + ++I +D ++ +V S R + +++ Sbjct: 640 YNNLKAIVPAKEISDIPINKLSDSFPIGRVVRTRIISVDTEQGRIVASIRQALGNKDPVS 699 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG--VDGLLHITDMAWKRVKHPSE---IVN 236 + ++ G VKG + + A + L + LL + ++A R E + Sbjct: 700 D---ISAVEIGNIVKGSISEIHKDNALIILQPTQIRALLSLKNLANFRQISLGELLVKLK 756 Query: 237 VGDEI-TVKVLKFDRERTRVSLG---LKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGC 292 VGDE+ + V+ + ++ V + K G + GRVT T + Sbjct: 757 VGDELDELVVVTRNPDKGVVIVANTPKKVPLLKGSSVSIDSLKVGQIVGGRVTRHTRHSA 816 Query: 293 FVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN 352 +++ + G +H +++ + V ++ +++ID + ++ L + K Sbjct: 817 LIKVTPQIGGTLHPTDISDDYDMGLV--LPPVDSILRAAIIEIDRSKNQLRLSTRHSKMY 874 Query: 353 PWQQ---------FAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGE 403 P + GD V G IKS+ D G+F+ + ID V + ++ + E Sbjct: 875 PESTKKIVDQEIIHIFDIHVGDTVRGSIKSVADHGLFVTIGRDIDARVQIRELFDDFV-E 933 Query: 404 EAVREYKKGDEIAAVVLQVDAERERISLGVKQ---LAEDPFNNWVALNKKGAIVTGKVTA 460 + +++ + ++L VD + ++ + +K + + +A K G V G V Sbjct: 934 DWKARFQEKQIVKGLILSVDLQTRKVEMTLKSGDLSTRNGSSVGLADLKVGQKVDGLVKR 993 Query: 461 VDAKGATVELAD-GVEGYLRASEASRDRVEDAT---LVLSVGDEVEAKFTGVDRKNRAIS 516 ++ G + + + G S+ S + + GD V+A G+D+ IS Sbjct: 994 IEDYGLFINIDRSKLNGLCHKSQLSDSQGAGVSFALNSFHEGDRVKAVIIGIDKA--RIS 1051 Query: 517 LSVRAKDEADEK 528 LS++ +E Sbjct: 1052 LSLKPSLFNEED 1063 Score = 180 bits (458), Expect = 9e-44, Method: Composition-based stats. Identities = 98/474 (20%), Positives = 197/474 (41%), Gaps = 36/474 (7%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL---EIQVGDEVDVALD 73 + +PG + V+ + + +LV+ ++ +PA++ + +G V + Sbjct: 616 DAKPGFVTHAVIFKVYGNHLLVEFYNNLKAIVPAKEISDIPINKLSDSFPIGRVVRTRII 675 Query: 74 AVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN--GIRAFL 131 +V+ G + S +A ++ ++ A E V G I+ K + L IRA L Sbjct: 676 SVDTEQGRIVASIRQALGNKDPVSDISAVEIGNIVKGSISEIHKDNALIILQPTQIRALL 735 Query: 132 P-GSLVDVRPVRDTLHLE----GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLL 186 +L + R + L G EL+ V+ VV+ + + Sbjct: 736 SLKNLANFRQISLGELLVKLKVGDELDELVVVTRNPDKGVVIVANTPKKVPLLKGSSVSI 795 Query: 187 ENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEI-TVK 244 ++L+ G V G V T + A + + + G LH TD++ ++ D I Sbjct: 796 DSLKVGQIVGGRVTRHTRHSALIKVTPQIGGTLHPTDISDDY--DMGLVLPPVDSILRAA 853 Query: 245 VLKFDRERTRVSLGLK--QLGEDPWVAIAKRY-------PEGTKLTGRVTNLTDYGCFVE 295 +++ DR + ++ L + ++ + I + G + G + ++ D+G FV Sbjct: 854 IIEIDRSKNQLRLSTRHSKMYPESTKKIVDQEIIHIFDIHVGDTVRGSIKSVADHGLFVT 913 Query: 296 IEEGVEGLVHVSEM-DWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQ---CKA 351 I ++ V + E+ D ++ +V+ ++L +D + R++ + LK Sbjct: 914 IGRDIDARVQIRELFDDFVEDWKAR--FQEKQIVKGLILSVDLQTRKVEMTLKSGDLSTR 971 Query: 352 NPWQQFAETHNKGDRVEGKIKSITDFGIFIGLD-GGIDGLVHLSDISWN--VAGEEAVRE 408 N G +V+G +K I D+G+FI +D ++GL H S +S + A+ Sbjct: 972 NGSSVGLADLKVGQKVDGLVKRIEDYGLFINIDRSKLNGLCHKSQLSDSQGAGVSFALNS 1031 Query: 409 YKKGDEIAAVVLQVDAERERISLGVKQL--AEDPFNNWVALNKKGAIVTGKVTA 460 + +GD + AV++ +D + RISL +K E+ F N+ +G + Sbjct: 1032 FHEGDRVKAVIIGID--KARISLSLKPSLFNEEDFQEGADTNEPIPEPSGVIKN 1083 Score = 172 bits (437), Expect = 3e-41, Method: Composition-based stats. Identities = 77/532 (14%), Positives = 195/532 (36%), Gaps = 34/532 (6%) Query: 21 GSIVR-GVVVAIDKD-VVLVDAGLKSESAIPAEQFKNAQGEL-----EIQVGDEVDVALD 73 G+I+ V+ ++ + ++V+ E + + G + Sbjct: 441 GTIIESAKVLRVETERGIIVEVQPGVEGFVHISHLSEDHVPSLSSTGPWKPGTLHRARVT 500 Query: 74 AVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFL- 131 G LS + + + ++ + E E + G I G V L+ I + Sbjct: 501 GYFSFDGLLQLSFKPSIIEQKFLQVSD-VEVGEVIKGTIKKLTDSGLFVSLSRSIDGVVW 559 Query: 132 PGSLVDVRPVRDTLHLE-GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQ 190 P D+ + G ++ KV+ +D R + ++ + + N + +++ + Sbjct: 560 PNHYADITLKHPEKRFKPGAGIKCKVLAVDVYRKRISLTAKKTLLDSNLPILSK-IDDAK 618 Query: 191 EGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFD 249 G ++ + V+ + ++ +++ + S+ +G + +++ D Sbjct: 619 PGFVTHAVIFKVYGNHLLVEFYNNLKAIVPAKEISDIPINKLSDSFPIGRVVRTRIISVD 678 Query: 250 RERTRVSLGLKQLG--EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEG-VEGLVHV 306 E+ R+ ++Q +DP I+ G + G ++ + + ++ + L+ + Sbjct: 679 TEQGRIVASIRQALGNKDPVSDISA-VEIGNIVKGSISEIHKDNALIILQPTQIRALLSL 737 Query: 307 SEMDWTNKNIHPSKVVN--VGDVV-EVMVLDIDEERRRISLG---LKQCKANPWQQFAET 360 + + +V VGD + E++V+ + ++ + + K ++ Sbjct: 738 KNLANFRQISLGELLVKLKVGDELDELVVVTRNPDKGVVIVANTPKKVPLLKGSSVSIDS 797 Query: 361 HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL 420 G V G++ T I + I G +H +DIS + + + + A ++ Sbjct: 798 LKVGQIVGGRVTRHTRHSALIKVTPQIGGTLHPTDISDDY--DMGLVLPPVDSILRAAII 855 Query: 421 QVDAERERISLGVKQLAEDPFNNW---------VALNKKGAIVTGKVTAVDAKGATVELA 471 ++D + ++ L + P + + G V G + +V G V + Sbjct: 856 EIDRSKNQLRLSTRHSKMYPESTKKIVDQEIIHIFDIHVGDTVRGSIKSVADHGLFVTIG 915 Query: 472 DGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKD 523 ++ ++ E D VED V+ VD + R + +++++ D Sbjct: 916 RDIDARVQIRELFDDFVEDWKARFQEKQIVKGLILSVDLQTRKVEMTLKSGD 967 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 95/536 (17%), Positives = 200/536 (37%), Gaps = 43/536 (8%) Query: 14 KEIETRPGSIVRGVVVAIDKDVVLVDAG-LKSESAIPAEQFK-NAQGELEIQVGDEVDVA 71 ++ + + G + V +++ ++D G E + + K G + + VG +DV+ Sbjct: 250 QKADLKNGFTMTAAVKSVEDHGYILDLGISGVEGFLAFKDTKMRPSGSIALDVGRLLDVS 309 Query: 72 LDAVEDGFGETLLSREKAKRHEAWITLEKAYED---AETVTGVINGKVKGGFTVELNGIR 128 + + ++ ++A +++T + V +I G +++ G Sbjct: 310 VTKLSANGRTCNVTTDQALFSSSYVTEMSSVTSVLPGALVQSLITAIHPTGLNLQVLG-- 367 Query: 129 AFLPGSLVDVRPVRDTLHL-EGKELEFKVI-KLDQKRNNVVVSRRAVI---------ESE 177 F G++ V + GK++ +++ + ++ + E Sbjct: 368 -FFEGTVDPVHLKKGGKAYQVGKKVRARILYEYSSSPPRFALALVDHLTNLSAPCIKSKE 426 Query: 178 NSAERDQLLENLQEGMEVK-GIVKNL-TDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEI 234 AE + E G ++ V + T+ G V++ GV+G +HI+ ++ V S Sbjct: 427 LPAETKSIQEAFPLGTIIESAKVLRVETERGIIVEVQPGVEGFVHISHLSEDHVPSLSST 486 Query: 235 --VNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGC 292 G +V + + L K + G + G + LTD G Sbjct: 487 GPWKPGTLHRARVTGYFSFDGLLQLSFKPSIIEQKFLQVSDVEVGEVIKGTIKKLTDSGL 546 Query: 293 FVEIEEGVEGLV---HVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC 349 FV + ++G+V H +++ HP K G ++ VL +D R+RISL K+ Sbjct: 547 FVSLSRSIDGVVWPNHYADITL----KHPEKRFKPGAGIKCKVLAVDVYRKRISLTAKKT 602 Query: 350 KAN---PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAV 406 + P + G I + + + + +V +IS ++ + Sbjct: 603 LLDSNLPILSKIDDAKPGFVTHAVIFKVYGNHLLVEFYNNLKAIVPAKEIS-DIPINKLS 661 Query: 407 REYKKGDEIAAVVLQVDAERERISLGVKQL--AEDPFNNWVALNKKGAIVTGKVTAVDAK 464 + G + ++ VD E+ RI ++Q +DP ++ ++ + G IV G ++ + Sbjct: 662 DSFPIGRVVRTRIISVDTEQGRIVASIRQALGNKDPVSD-ISAVEIGNIVKGSISEIHKD 720 Query: 465 GATVELAD-GVEGYLRASEASRDRVEDATL---VLSVGDEV-EAKFTGVDRKNRAI 515 A + L + L + R L VGDE+ E + + Sbjct: 721 NALIILQPTQIRALLSLKNLANFRQISLGELLVKLKVGDELDELVVVTRNPDKGVV 776 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 81/455 (17%), Positives = 160/455 (35%), Gaps = 48/455 (10%) Query: 134 SLVDVRPVRDTLHLEGKELEFKVIKLD-QKRNNVVVSRRAVIESENSAERDQL------- 185 S D + D G+ + V + + ++ E+ ++ R +L Sbjct: 187 SDSDTPDLSDIFR-VGQYVRAVVSAIHAPGSSEASSLGKSRDETSKASRRVELSLVPERV 245 Query: 186 -----LENLQEGMEVKGIVKNLTDYGAFVDLG--GVDGLLHITDMAWKRVKHPSEIVNVG 238 +L+ G + VK++ D+G +DLG GV+G L D + + ++VG Sbjct: 246 NAGVQKADLKNGFTMTAAVKSVEDHGYILDLGISGVEGFLAFKDTKMRPSGSIA--LDVG 303 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPW----VAIAKRYPEGTKLTGRVTNLTDYGCFV 294 + V V K ++ Q ++ G + +T + G + Sbjct: 304 RLLDVSVTKLSANGRTCNVTTDQALFSSSYVTEMSSVTSVLPGALVQSLITAIHPTGLNL 363 Query: 295 EIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVL-DIDEERRRISLGL------- 346 ++ EG V + K VG V +L + R +L L Sbjct: 364 QVLGFFEGTVDPVHL------KKGGKAYQVGKKVRARILYEYSSSPPRFALALVDHLTNL 417 Query: 347 ------KQCKANPWQQFAETHNKGDRVE-GKIKSI-TDFGIFIGLDGGIDGLVHLSDISW 398 + + E G +E K+ + T+ GI + + G++G VH+S +S Sbjct: 418 SAPCIKSKELPAETKSIQEAFPLGTIIESAKVLRVETERGIIVEVQPGVEGFVHISHLSE 477 Query: 399 NVAGE-EAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGK 457 + + +K G A V + + L K + V+ + G ++ G Sbjct: 478 DHVPSLSSTGPWKPGTLHRARVTGYFSFDGLLQLSFKPSIIEQKFLQVSDVEVGEVIKGT 537 Query: 458 VTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISL 517 + + G V L+ ++G + + + ++ G ++ K VD + ISL Sbjct: 538 IKKLTDSGLFVSLSRSIDGVVWPNHYADITLKHPEKRFKPGAGIKCKVLAVDVYRKRISL 597 Query: 518 SVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFK 552 + + + ++K +DA A FK Sbjct: 598 TAKKTLLDSN---LPILSKIDDAKPGFVTHAVIFK 629 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 55/296 (18%), Positives = 114/296 (38%), Gaps = 27/296 (9%) Query: 8 LFEESLKEIE-TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ--GELEIQV 64 L + S I+ + G IV G V + L+ + + + G + V Sbjct: 787 LLKGSSVSIDSLKVGQIVGGRVTRHTRHSALIKVTPQIGGTLHPTDISDDYDMGLVLPPV 846 Query: 65 GDEVDVALDAVEDGFGETLLSREKAK------RHEAWITLEKAYE--DAETVTGVINGKV 116 + A+ ++ + LS +K + + ++ +TV G I Sbjct: 847 DSILRAAIIEIDRSKNQLRLSTRHSKMYPESTKKIVDQEIIHIFDIHVGDTVRGSIKSVA 906 Query: 117 KGGFTVELN-GIRAFLPGSLVDVRPVRDTL--HLEGKELEFKVIKLDQKRNNVVVSRRAV 173 G V + I A + + V D E + ++ ++ +D + V ++ ++ Sbjct: 907 DHGLFVTIGRDIDARVQIRELFDDFVEDWKARFQEKQIVKGLILSVDLQTRKVEMTLKSG 966 Query: 174 IESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG--GVDGLLHITDMAWKR---V 228 S + L +L+ G +V G+VK + DYG F+++ ++GL H + ++ + V Sbjct: 967 DLSTRNGS-SVGLADLKVGQKVDGLVKRIEDYGLFINIDRSKLNGLCHKSQLSDSQGAGV 1025 Query: 229 KHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRV 284 + GD + ++ D + R+SL LK P + + + EG + Sbjct: 1026 SFALNSFHEGDRVKAVIIGID--KARISLSLK-----PSLFNEEDFQEGADTNEPI 1074 Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 26/202 (12%), Positives = 71/202 (35%), Gaps = 23/202 (11%) Query: 1 MTESFAQLFEESLKEI---------ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAE 51 ++ ++++ ES K+I + G VRG + ++ + V G ++ + Sbjct: 866 LSTRHSKMYPESTKKIVDQEIIHIFDIHVGDTVRGSIKSVADHGLFVTIGRDIDARVQIR 925 Query: 52 QFKNAQGEL---EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKA--YEDAE 106 + + E Q V + +V+ + ++ + + + + Sbjct: 926 ELFDDFVEDWKARFQEKQIVKGLILSVDLQTRKVEMTLKSGDLSTRNGSSVGLADLKVGQ 985 Query: 107 TVTGVINGKVKGGFTVELN--GIRAFLPGSLVD------VRPVRDTLHLEGKELEFKVIK 158 V G++ G + ++ + S + V ++ H EG ++ +I Sbjct: 986 KVDGLVKRIEDYGLFINIDRSKLNGLCHKSQLSDSQGAGVSFALNSFH-EGDRVKAVIIG 1044 Query: 159 LDQKRNNVVVSRRAVIESENSA 180 +D+ R ++ + E + Sbjct: 1045 IDKARISLSLKPSLFNEEDFQE 1066 >UniRef50_A4QP01 Pdcd11 protein n=4 Tax=Clupeocephala RepID=A4QP01_DANRE Length = 932 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 99/519 (19%), Positives = 199/519 (38%), Gaps = 27/519 (5%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVE 76 PG +V G V + ++V + + E G E+ + V+ Sbjct: 265 NLLPGLLVHGCVKRVTPHGLIVTFLSSFTGVVDFLHL-DEDKESTYSKGQEILARILYVQ 323 Query: 77 DGFGETLLSREK--AKRHEAWITLEKAYEDAETVTGVINGKV---KGGFTVELNGIRAFL 131 + LS A + L + E V G + G L+G RAF+ Sbjct: 324 PSTRQVGLSLRSHLLPPGGAVLDLHFSERVGEVVQGCQMTSLHHYSGALMKMLDGSRAFV 383 Query: 132 PGSLVDVRPVR-DTLHLEGK-ELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENL 189 +L+ DT HL + + ++I + R + +++ Sbjct: 384 HRNLLKEPKEELDTNHLMSQSQHILRIINYSPIEQIYQATLRW----SSIETPFFSCQDI 439 Query: 190 QEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKF 248 + G V+G V +L +G +V +G + G++ +A +K+P + G ++ +VL Sbjct: 440 KVGQIVEGTVIDLQKHGVYVRIGEHIRGMIPRIHLADVTLKNPEKKFYPGLKVKCRVLSV 499 Query: 249 DRERTRVSLGLKQLGEDPWVAIAKRYP---EGTKLTGRVTNLTDYGCFVEIEEGVEGLVH 305 + ++ + L K+ + + I + Y G G V + ++GC V E V+GLV Sbjct: 500 EAQKKLLILTRKKALVESTLPIFQSYSDARPGRISHGFVVCIKEFGCIVRFYEDVKGLVP 559 Query: 306 VSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN---PWQQFAETHN 362 + E+ T +P ++ VG VV+V VL DEE++ + L K Q Sbjct: 560 MQELT-TETVTNPEELFFVGQVVKVKVLKCDEEKKMLRLSFKSVTEEDVREEQIAKFDFI 618 Query: 363 KGDRVEGKIKSITDFGIFIGL-DGGIDGLVHLSDISWNVAGEEAV-REYKKGDEIAAVVL 420 G V+ ++ G+ + + + + + +S +V + ++GD I ++ Sbjct: 619 VGKMVDARVCRKVLNGLEVSIIPEEVQAFLPTTHLSDHVTNCLPLWMALEEGDTICNLMC 678 Query: 421 QVDAERERISLGVKQ-----LAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVE 475 + +++ I L K + + + + G + G V + G + GV Sbjct: 679 LTNYKKKGIVLTKKPHLKAYIEDGAIPKNFSELQVGMQMVGWVKNIMPYGVFISFPYGVF 738 Query: 476 GYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRA 514 G + +++ + + + V AK T +D + + Sbjct: 739 GLAPIANMGDQFIKETSGIFDIDQTVVAKVTNLDEEKQR 777 Score = 207 bits (528), Expect = 8e-52, Method: Composition-based stats. Identities = 94/552 (17%), Positives = 211/552 (38%), Gaps = 53/552 (9%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE----------------- 59 + G+++ G V + V+V +P +A Sbjct: 74 DLTVGTLMLGCVKEVSDFEVVVGLPSGLVGYLPICNICDAYTNILNDKLDTDDGLEEVVP 133 Query: 60 --LEIQVGDEVDVALDAVE---DGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVING 114 G + + +++ +G LS ++A ++ A + A T++G + Sbjct: 134 LSKLFTPGMLIRCVVSSLDSAKEGHISLKLSINPKDVNKALNSV--ALKPAMTLSGCVES 191 Query: 115 KVKGGFTVELN--GIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSR-- 170 G+ V++ G +AFLP G+ + + + V +S+ Sbjct: 192 VEDHGYLVDIGIGGSKAFLPK----KSTSSKQDLYVGQYVLVLIEDVKDSGRVVRLSQNP 247 Query: 171 RAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFV----DLGGVDGLLHITDMAWK 226 +A++++ ++ L+NL G+ V G VK +T +G V GV LH+ + Sbjct: 248 QALVKACAETKQGWTLDNLLPGLLVHGCVKRVTPHGLIVTFLSSFTGVVDFLHLDE---- 303 Query: 227 RVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLT----G 282 + G EI ++L +V L L+ P A+ + Sbjct: 304 ---DKESTYSKGQEILARILYVQPSTRQVGLSLRSHLLPPGGAVLDLHFSERVGEVVQGC 360 Query: 283 RVTNLTDY-GCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRR 341 ++T+L Y G +++ +G VH + + + + + +++ + + +++ + Sbjct: 361 QMTSLHHYSGALMKMLDGSRAFVHRNLLKEPKEELDTNHLMSQSQHI-LRIINYSPIEQI 419 Query: 342 ISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVA 401 L+ + G VEG + + G+++ + I G++ ++ +V Sbjct: 420 YQATLRWSSIETPFFSCQDIKVGQIVEGTVIDLQKHGVYVRIGEHIRGMIPRIHLA-DVT 478 Query: 402 GEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAED---PFNNWVALNKKGAIVTGKV 458 + +++ G ++ VL V+A+++ + L K+ + P + + G I G V Sbjct: 479 LKNPEKKFYPGLKVKCRVLSVEAQKKLLILTRKKALVESTLPIFQSYSDARPGRISHGFV 538 Query: 459 TAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLS 518 + G V + V+G + E + + V + + VG V+ K D + + + LS Sbjct: 539 VCIKEFGCIVRFYEDVKGLVPMQELTTETVTNPEELFFVGQVVKVKVLKCDEEKKMLRLS 598 Query: 519 VRAKDEADEKDA 530 ++ E D ++ Sbjct: 599 FKSVTEEDVREE 610 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 95/515 (18%), Positives = 198/515 (38%), Gaps = 35/515 (6%) Query: 10 EESLKEIETRPGSIVRGVVVAIDKDVVLVDAG-LKSESAIPAEQFKNAQGELEIQVGDEV 68 ++L + +P + G V +++ LVD G S++ +P K+ + ++ VG V Sbjct: 171 NKALNSVALKPAMTLSGCVESVEDHGYLVDIGIGGSKAFLPK---KSTSSKQDLYVGQYV 227 Query: 69 DVALDAVEDGFGETLLSREKAKRHEAWITLEKAYED-----AETVTGVINGKVKGGFTV- 122 V ++ V+D LS+ +A ++ + V G + G V Sbjct: 228 LVLIEDVKDSGRVVRLSQNPQALVKACAETKQGWTLDNLLPGLLVHGCVKRVTPHGLIVT 287 Query: 123 ---ELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 G+ FL + +++ + +G+E+ +++ + V +S R+ + Sbjct: 288 FLSSFTGVVDFL-----HLDEDKESTYSKGQEILARILYVQPSTRQVGLSLRSHLLPPGG 342 Query: 180 AERDQLLENLQEGMEVKG-IVKNLTDY-GAFVD-LGGVDGLLHITDMAWKRVKHPSEIVN 236 A D + G V+G + +L Y GA + L G +H + + + + + Sbjct: 343 AVLDLHFSE-RVGEVVQGCQMTSLHHYSGALMKMLDGSRAFVHRNLLKEPKEELDTNHLM 401 Query: 237 VGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI 296 + ++++ + L+ + + G + G V +L +G +V I Sbjct: 402 SQSQHILRIINYSPIEQIYQATLRWSSIETPFFSCQDIKVGQIVEGTVIDLQKHGVYVRI 461 Query: 297 EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN---P 353 E + G++ + +P K G V+ VL ++ +++ + L K+ P Sbjct: 462 GEHIRGMIPRIHLA-DVTLKNPEKKFYPGLKVKCRVLSVEAQKKLLILTRKKALVESTLP 520 Query: 354 WQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGD 413 Q G G + I +FG + + GLV + +++ + G Sbjct: 521 IFQSYSDARPGRISHGFVVCIKEFGCIVRFYEDVKGLVPMQELTTETV-TNPEELFFVGQ 579 Query: 414 EIAAVVLQVDAERERISLGVKQL-AEDPFNNWVALNK--KGAIVTGKVTAVDAKGATVE- 469 + VL+ D E++ + L K + ED +A G +V +V G V Sbjct: 580 VVKVKVLKCDEEKKMLRLSFKSVTEEDVREEQIAKFDFIVGKMVDARVCRKVLNGLEVSI 639 Query: 470 LADGVEGYLRASEASRDRVED---ATLVLSVGDEV 501 + + V+ +L + S D V + + L GD + Sbjct: 640 IPEEVQAFLPTTHLS-DHVTNCLPLWMALEEGDTI 673 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 90/482 (18%), Positives = 188/482 (39%), Gaps = 56/482 (11%) Query: 105 AETVTGVINGKVKGGFTVEL-NGIRAFLPGSLVDVRPVRDTLH--LEGKELEFKVIKLDQ 161 + V G + K G V + IR +P + +++ G +++ +V+ ++ Sbjct: 442 GQIVEGTVIDLQKHGVYVRIGEHIRGMIPRIHLADVTLKNPEKKFYPGLKVKCRVLSVEA 501 Query: 162 KRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHI 220 ++ ++++R+ + E++ Q + + G G V + ++G V V GL+ + Sbjct: 502 QKKLLILTRKKAL-VESTLPIFQSYSDARPGRISHGFVVCIKEFGCIVRFYEDVKGLVPM 560 Query: 221 TDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGED---PWVAIAKRYPEG 277 ++ + V +P E+ VG + VKVLK D E+ + L K + E+ + G Sbjct: 561 QELTTETVTNPEELFFVGQVVKVKVLKCDEEKKMLRLSFKSVTEEDVREEQIAKFDFIVG 620 Query: 278 TKLTGRVTNLTDYGCFVEI-EEGVEGLVHVSEMDWTNKNIHPS-KVVNVGDVVEVMVLDI 335 + RV G V I E V+ + + + N P + GD + ++ Sbjct: 621 KMVDARVCRKVLNGLEVSIIPEEVQAFLPTTHLSDHVTNCLPLWMALEEGDTICNLMCLT 680 Query: 336 DEERRRISLGLKQ-----CKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGL 390 + +++ I L K + + G ++ G +K+I +G+FI G+ GL Sbjct: 681 NYKKKGIVLTKKPHLKAYIEDGAIPKNFSELQVGMQMVGWVKNIMPYGVFISFPYGVFGL 740 Query: 391 VHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISL------------------- 431 ++++ + +E + + A V +D E++R + Sbjct: 741 APIANMG-DQFIKETSGIFDIDQTVVAKVTNLDEEKQRFLVSLKLSELSLSENEFHTRLI 799 Query: 432 -GVKQLA----------EDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGY-LR 479 G+K+ + ++ G + V G+ + +D + G + Sbjct: 800 QGLKERRNISEMRAGRGDSDVLWKLSALTVGDQMKMIVGDTTEDGSVMLTSDQLSGVTVL 859 Query: 480 ASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRA----KDEADEKDAIATVN 535 AS+ ++ V L+ G ++ A +D + +S+R K E EKDA T Sbjct: 860 ASKYHKEGVN-----LTPGCKLNAVILHIDFVKSQVHVSLRPKLNIKKEKLEKDARFTAK 914 Query: 536 KQ 537 Sbjct: 915 SS 916 Score = 148 bits (373), Expect = 7e-34, Method: Composition-based stats. Identities = 69/346 (19%), Positives = 128/346 (36%), Gaps = 19/346 (5%) Query: 13 LKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA---QGELEIQVGDEVD 69 + + G IV G V+ + K V V G IP + E + G +V Sbjct: 434 FSCQDIKVGQIVEGTVIDLQKHGVYVRIGEHIRGMIPRIHLADVTLKNPEKKFYPGLKVK 493 Query: 70 VALDAVEDGFGETLLSREKAKRHEAWITLEKAYED--AETVTGVINGKVKGGFTVEL-NG 126 + +VE +L+R+KA + + G + + G V Sbjct: 494 CRVLSVEAQKKLLILTRKKALVESTLPIFQSYSDARPGRISHGFVVCIKEFGCIVRFYED 553 Query: 127 IRAFLPGSLVDVRPVRDTLH--LEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQ 184 ++ +P + V + G+ ++ KV+K D+++ + +S ++V E + E+ Sbjct: 554 VKGLVPMQELTTETVTNPEELFFVGQVVKVKVLKCDEEKKMLRLSFKSVTEEDVREEQIA 613 Query: 185 LLENLQEGMEVKGIVKNLTDYGAFVDL--GGVDGLLHITDMAWKRVK--HPSEIVNVGDE 240 + + G V V G V + V L T ++ + GD Sbjct: 614 KFDFI-VGKMVDARVCRKVLNGLEVSIIPEEVQAFLPTTHLSDHVTNCLPLWMALEEGDT 672 Query: 241 ITVKVLKFDRERTRVSLG----LKQLGEDPWV-AIAKRYPEGTKLTGRVTNLTDYGCFVE 295 I + + ++ + L LK ED + G ++ G V N+ YG F+ Sbjct: 673 ICNLMCLTNYKKKGIVLTKKPHLKAYIEDGAIPKNFSELQVGMQMVGWVKNIMPYGVFIS 732 Query: 296 IEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRR 341 GV GL ++ M S + ++ V V ++DEE++R Sbjct: 733 FPYGVFGLAPIANM-GDQFIKETSGIFDIDQTVVAKVTNLDEEKQR 777 Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats. Identities = 68/435 (15%), Positives = 148/435 (34%), Gaps = 38/435 (8%) Query: 125 NGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQ 184 +G+ +P S + G + V LD + + + ++ + + + Sbjct: 126 DGLEEVVPLSKL---------FTPGMLIRCVVSSLDSAKEGHISLKLSINPKDVNKALNS 176 Query: 185 LLENLQEGMEVKGIVKNLTDYGAFVDLG--GVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 + L+ M + G V+++ D+G VD+G G L K+ + + VG + Sbjct: 177 V--ALKPAMTLSGCVESVEDHGYLVDIGIGGSKAFLP------KKSTSSKQDLYVGQYVL 228 Query: 243 VKVLKFDRERTRVSLG------LKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI 296 V + V L +K E G + G V +T +G V Sbjct: 229 VLIEDVKDSGRVVRLSQNPQALVKACAETKQGWTLDNLLPGLLVHGCVKRVTPHGLIVTF 288 Query: 297 EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQ 356 G+V +D ++ + G + +L + R++ L L+ P Sbjct: 289 LSSFTGVVDFLHLDEDKEST-----YSKGQEILARILYVQPSTRQVGLSLRSHLLPPGGA 343 Query: 357 FAETH---NKGDRVEG-KIKSITDF-GIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKK 411 + H G+ V+G ++ S+ + G + + G VH ++ E Sbjct: 344 VLDLHFSERVGEVVQGCQMTSLHHYSGALMKMLDGSRAFVHR-NLLKEPKEELDTNHLMS 402 Query: 412 GDEIAAVVLQVDAERERISLGVK-QLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVEL 470 + ++ + ++ E PF + K G IV G V + G V + Sbjct: 403 QSQHILRIINYSPIEQIYQATLRWSSIETPFFS-CQDIKVGQIVEGTVIDLQKHGVYVRI 461 Query: 471 ADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDA 530 + + G + + +++ G +V+ + V+ + + + L+ + Sbjct: 462 GEHIRGMIPRIHLADVTLKNPEKKFYPGLKVKCRVLSVEAQKKLLILTRKKALVESTLPI 521 Query: 531 IATVNKQEDANFSNN 545 + + S+ Sbjct: 522 FQSYSDARPGRISHG 536 >UniRef50_O74835 rRNA biogenesis protein rrp5 n=1 Tax=Schizosaccharomyces pombe RepID=RRP5_SCHPO Length = 1690 Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 125/577 (21%), Positives = 222/577 (38%), Gaps = 70/577 (12%) Query: 4 SFAQ--LFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ---G 58 SF Q L ++ L+ + G V G + + ++V +P+ + Sbjct: 471 SFQQSVLNQQFLRIEDIEVGQFVDGTIAKLIPQGIVVTISEGINGLVPSTHMADIALQFP 530 Query: 59 ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVT---GVINGK 115 E +VG V + + LL+ +K+ + + YE A T G + Sbjct: 531 ERRFKVGSSVKCRVLSTNVLRKRVLLTLKKSLLNTDLPLIYD-YEQATPGTQTVGTLARI 589 Query: 116 VKGGFTVEL-NGIRAFLPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRA 172 + G VE N +RAFLP S + +RD G+ L ++ D + + V R Sbjct: 590 FEDGAIVEFYNSVRAFLPVSEMSEAYIRDAREHFKVGQTLSVTIVSCDPENRKMRVGCR- 648 Query: 173 VIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHP 231 E A+R + EN++ G + GIV T+ VDLG V G++ + + + Sbjct: 649 --EQSWDAKRLERFENIKAGSVLSGIVLQKTEDSVIVDLGDKVTGVITLGQLCDGDLNKC 706 Query: 232 SEI---VNVGDEI-TVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRY-----PEGTKLTG 282 S++ + ++ V VL+ D + +SL LK+ + EG K G Sbjct: 707 SKVMNKLRASTKLAEVLVLRKDTSKKLISLSLKKSLVEAAKENRMPINITDLKEGIKYFG 766 Query: 283 RVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRI 342 V N T +G FVE +G+ LV + + + PS V V + L ++ + + Sbjct: 767 FVRNATTFGVFVEFCDGLVALVPKAYISEEYVPV-PSAVYKPQQSVTCVCLSVELSQEKA 825 Query: 343 SLGLK---QCKANPWQQFAETHNKGDRVEGKIKSITDFGIF----------------IGL 383 + K Q + + ++ + V+ IK D+ + L Sbjct: 826 FMSFKPLAQKQEKAVEFMESKYDIDNPVDETIKKTYDYVAGKITWAVVTSAKASQLNVDL 885 Query: 384 DGGIDGLVHLSDISWN----VAGEEAVREYKKGDEIAAVVLQV-DAERERI-----SLGV 433 + G V +S++ N V + ++ + KGD+I VL + D+ + + Sbjct: 886 AANVHGRVDVSEVFDNFGEIVDPNKPLKRFHKGDKIRVRVLGIHDSRNHKFLPISHRVSP 945 Query: 434 KQLAE----------DPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEA 483 KQ E +PF+ KKG VTG V V + V L V G + + Sbjct: 946 KQFLELSVRPSILNMEPFSMKEPQFKKGDEVTGFVNNVSKECVWVSLTPSVNGRIPILDL 1005 Query: 484 SRD--RVEDATLVLSVGDEVEAKFTGVDRKNRAISLS 518 + D + +G ++ V+ ++ I+LS Sbjct: 1006 TTDVKELNSLQKHFFLGKAIKCYV--VNAEDS-ITLS 1039 Score = 194 bits (494), Expect = 7e-48, Method: Composition-based stats. Identities = 103/578 (17%), Positives = 216/578 (37%), Gaps = 69/578 (11%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEV-------D 69 + GS++ G+V+ +D V+VD G K I Q + +V +++ + Sbjct: 662 NIKAGSVLSGIVLQKTEDSVIVDLGDKVTGVITLGQLCDGDLNKCSKVMNKLRASTKLAE 721 Query: 70 VALDAVEDGFGETLLSREKAKRHEAWITLEKA----YEDAETVTGVINGKVKGGFTVEL- 124 V + + LS +K+ A ++ G + G VE Sbjct: 722 VLVLRKDTSKKLISLSLKKSLVEAAKENRMPINITDLKEGIKYFGFVRNATTFGVFVEFC 781 Query: 125 NGIRAFLPGSLVDVRPVRDTLHLEG--KELEFKVIKLDQKRNNVVVSRRAVIESENSA-- 180 +G+ A +P + + V + + + + ++ + +S + + + + A Sbjct: 782 DGLVALVPKAYISEEYVPVPSAVYKPQQSVTCVCLSVELSQEKAFMSFKPLAQKQEKAVE 841 Query: 181 ----------ERDQLLE---NLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWK 226 D+ ++ + G +V + VDL V G + ++++ Sbjct: 842 FMESKYDIDNPVDETIKKTYDYVAGKITWAVVTSAKASQLNVDLAANVHGRVDVSEVFDN 901 Query: 227 R-----VKHPSEIVNVGDEITVKVLKFDRERT--------RVS------LGLKQ--LGED 265 P + + GD+I V+VL R RVS L ++ L + Sbjct: 902 FGEIVDPNKPLKRFHKGDKIRVRVLGIHDSRNHKFLPISHRVSPKQFLELSVRPSILNME 961 Query: 266 PWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHP-SKVVNV 324 P+ ++ +G ++TG V N++ +V + V G + + ++ K ++ K + Sbjct: 962 PFSMKEPQFKKGDEVTGFVNNVSKECVWVSLTPSVNGRIPILDLTTDVKELNSLQKHFFL 1021 Query: 325 GDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLD 384 G ++ V++ ++ I+L A Q E G R+ GK+ ++ + G + L Sbjct: 1022 GKAIKCYVVNAEDS---ITLS-----AIGPLQGFENLTPGSRLVGKVTNVNEAGAILQLP 1073 Query: 385 GGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLA------- 437 G + G V D+ + ++ + + + VL VD +++L + Sbjct: 1074 GHMSGRVSRIDMFDDY-DILPETKFTRNNLVGVCVLSVDVPNRKVALSARNSRTQSQPVE 1132 Query: 438 -EDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLS 496 +D N V K G I G V V +G V + + ++ E ++D Sbjct: 1133 IKDKEINSVDDLKIGDICRGFVCNVANQGLFVTIGHNLIARVKIGELFDTFIKDWKPHFH 1192 Query: 497 VGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATV 534 V V+ G+D ++ I +S++ D + T Sbjct: 1193 VNQLVKGSIVGIDNDSKRIEMSLKQSKIKDSSEITKTF 1230 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 87/443 (19%), Positives = 170/443 (38%), Gaps = 25/443 (5%) Query: 119 GFTVELN--GIRAFLPGSLVDVRPVRDTLHLEG-----KELEFKVIKLDQKRNNVVVSRR 171 G ++ I F S + + V G E ++I N ++S Sbjct: 414 GVFCDVGVPEISGFAHISRLSDKKVAGISPNSGPYKVDSTHEARIINYSYVDNLYILS-- 471 Query: 172 AVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKH 230 + ++ +E+++ G V G + L G V + G++GL+ T MA ++ Sbjct: 472 --FQQSVLNQQFLRIEDIEVGQFVDGTIAKLIPQGIVVTISEGINGLVPSTHMADIALQF 529 Query: 231 PSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGED---PWVAIAKRYPEGTKLTGRVTNL 287 P VG + +VL + R RV L LK+ + P + ++ GT+ G + + Sbjct: 530 PERRFKVGSSVKCRVLSTNVLRKRVLLTLKKSLLNTDLPLIYDYEQATPGTQTVGTLARI 589 Query: 288 TDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLK 347 + G VE V + VSEM + VG + V ++ D E R++ +G + Sbjct: 590 FEDGAIVEFYNSVRAFLPVSEMSEAYIR-DAREHFKVGQTLSVTIVSCDPENRKMRVGCR 648 Query: 348 QCKANPWQ-QFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGE--E 404 + + + + E G + G + T+ + + L + G++ L + + + Sbjct: 649 EQSWDAKRLERFENIKAGSVLSGIVLQKTEDSVIVDLGDKVTGVITLGQLCDGDLNKCSK 708 Query: 405 AVREYKKGDEI-AAVVLQVDAERERISLGVKQ-----LAEDPFNNWVALNKKGAIVTGKV 458 + + + ++ +VL+ D ++ ISL +K+ E+ + K+G G V Sbjct: 709 VMNKLRASTKLAEVLVLRKDTSKKLISLSLKKSLVEAAKENRMPINITDLKEGIKYFGFV 768 Query: 459 TAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLS 518 G VE DG+ + + S + V + V V V+ +S Sbjct: 769 RNATTFGVFVEFCDGLVALVPKAYISEEYVPVPSAVYKPQQSVTCVCLSVELSQEKAFMS 828 Query: 519 VRAKDEADEKDAIATVNKQEDAN 541 + + EK +K + N Sbjct: 829 FKPLAQKQEKAVEFMESKYDIDN 851 Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 97/549 (17%), Positives = 198/549 (36%), Gaps = 46/549 (8%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAG-LKSESAIPAEQFKNAQGELEIQVGDEVDVALDAV 75 + GS+++ VV +I+ ++ D G + + + G + ++ + Sbjct: 222 DFVAGSMIQAVVSSIEDHGIVFDIGINNYTGFLSKKHIND----FPFVEGQSLLCSVISK 277 Query: 76 EDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSL 135 ED L+ K E +++ + + ++ + G + G+ Sbjct: 278 EDRIFHLSLTATSTKALEVMPSVQAILP-GDYINVLVTDIKESGVIAKYMGV-------- 328 Query: 136 VDV-RPVRDTLHLEG----------KELEFKVIKL---DQKRNNVVVSRRAVIESENSAE 181 VDV + + ++G K + +V+ + D + V + + + Sbjct: 329 VDVTSDIYHSSPVKGEDLEDKFQLAKSVPARVLFVIPGDPPKIAVSFLPHVLTFNFATPN 388 Query: 182 RDQLLENLQEGMEVK-GIVKNL-TDYGAFVDLG--GVDGLLHITDMAWKRVKHPSEI--- 234 + L G V V + + G F D+G + G HI+ ++ K+V S Sbjct: 389 TPHP-DQLDIGFIVNAAKVTYVSSSLGVFCDVGVPEISGFAHISRLSDKKVAGISPNSGP 447 Query: 235 VNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFV 294 V +++ + L +Q + + G + G + L G V Sbjct: 448 YKVDSTHEARIINYSYVDNLYILSFQQSVLNQQFLRIEDIEVGQFVDGTIAKLIPQGIVV 507 Query: 295 EIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN-- 352 I EG+ GLV + M P + VG V+ VL + R+R+ L LK+ N Sbjct: 508 TISEGINGLVPSTHMADIALQF-PERRFKVGSSVKCRVLSTNVLRKRVLLTLKKSLLNTD 566 Query: 353 -PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKK 411 P E G + G + I + G + + + +S++S +A +K Sbjct: 567 LPLIYDYEQATPGTQTVGTLARIFEDGAIVEFYNSVRAFLPVSEMS-EAYIRDAREHFKV 625 Query: 412 GDEIAAVVLQVDAERERISLGVKQLAEDPFN-NWVALNKKGAIVTGKVTAVDAKGATVEL 470 G ++ ++ D E ++ +G ++ + D K G++++G V V+L Sbjct: 626 GQTLSVTIVSCDPENRKMRVGCREQSWDAKRLERFENIKAGSVLSGIVLQKTEDSVIVDL 685 Query: 471 ADGVEGYLRASEASR---DRVEDATLVLSVGDEV-EAKFTGVDRKNRAISLSVRAKDEAD 526 D V G + + ++ L ++ E D + ISLS++ Sbjct: 686 GDKVTGVITLGQLCDGDLNKCSKVMNKLRASTKLAEVLVLRKDTSKKLISLSLKKSLVEA 745 Query: 527 EKDAIATVN 535 K+ +N Sbjct: 746 AKENRMPIN 754 Score = 180 bits (458), Expect = 9e-44, Method: Composition-based stats. Identities = 102/577 (17%), Positives = 213/577 (36%), Gaps = 62/577 (10%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA---QGELEIQVGDEVDVALD 73 + PG+ G + I +D +V+ + +P + A +VG + V + Sbjct: 575 QATPGTQTVGTLARIFEDGAIVEFYNSVRAFLPVSEMSEAYIRDAREHFKVGQTLSVTIV 634 Query: 74 AVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFLP 132 + + + + + + + + ++G++ K + V+L + + Sbjct: 635 SCDPENRKMRVGCREQSWDAKRLERFENIKAGSVLSGIVLQKTEDSVIVDLGDKVTGVIT 694 Query: 133 GSLVDVRPVRDTLHLEGKEL------EFKVIKLDQKRNNVVVS-RRAVIESENSAERDQL 185 + + + K E V++ D + + +S +++++E+ Sbjct: 695 LGQLCDGDLNKCSKVMNKLRASTKLAEVLVLRKDTSKKLISLSLKKSLVEAAKENRMPIN 754 Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 + +L+EG++ G V+N T +G FV+ G+ L+ ++ + V PS + +T Sbjct: 755 ITDLKEGIKYFGFVRNATTFGVFVEFCDGLVALVPKAYISEEYVPVPSAVYKPQQSVTCV 814 Query: 245 VLKFDRERTRVSLGLKQLGE-------------------DPWVAIAKRYPEGTKLTGRVT 285 L + + + + K L + D + Y G VT Sbjct: 815 CLSVELSQEKAFMSFKPLAQKQEKAVEFMESKYDIDNPVDETIKKTYDYVAGKITWAVVT 874 Query: 286 NLTDYGCFVEIEEGVEGLVHVSEMDWTNKNI----HPSKVVNVGDVVEVMVLDIDEERRR 341 + V++ V G V VSE+ I P K + GD + V VL I + R Sbjct: 875 SAKASQLNVDLAANVHGRVDVSEVFDNFGEIVDPNKPLKRFHKGDKIRVRVLGIHDSRNH 934 Query: 342 --------------ISLGLKQCKAN--PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDG 385 + L ++ N P+ KGD V G + +++ +++ L Sbjct: 935 KFLPISHRVSPKQFLELSVRPSILNMEPFSMKEPQFKKGDEVTGFVNNVSKECVWVSLTP 994 Query: 386 GIDGLVHLSDISWNVAGEEAV-REYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNW 444 ++G + + D++ +V ++ + + G I V+ + I+L A P + Sbjct: 995 SVNGRIPILDLTTDVKELNSLQKHFFLGKAIKCYVVN---AEDSITLS----AIGPLQGF 1047 Query: 445 VALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAK 504 G+ + GKVT V+ GA ++L + G + + D + + V Sbjct: 1048 -ENLTPGSRLVGKVTNVNEAGAILQLPGHMSGRVSRIDMFDDYDILPETKFTRNNLVGVC 1106 Query: 505 FTGVDRKNRAISLSVR--AKDEADEKDAIATVNKQED 539 VD NR ++LS R + +N +D Sbjct: 1107 VLSVDVPNRKVALSARNSRTQSQPVEIKDKEINSVDD 1143 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 100/579 (17%), Positives = 215/579 (37%), Gaps = 67/579 (11%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE---IQVGDEVDVALD 73 + + G G V V V+ + +P + + V Sbjct: 757 DLKEGIKYFGFVRNATTFGVFVEFCDGLVALVPKAYISEEYVPVPSAVYKPQQSVTCVCL 816 Query: 74 AVEDGFGETLLSREKA--KRHEAWITLEKAYEDAETVT----------------GVINGK 115 +VE + +S + K+ +A +E Y+ V V+ Sbjct: 817 SVELSQEKAFMSFKPLAQKQEKAVEFMESKYDIDNPVDETIKKTYDYVAGKITWAVVTSA 876 Query: 116 VKGGFTVELN-GIRAFLPGSLVD------VRPVRDTLHL-EGKELEFKVIKLD--QKRNN 165 V+L + + S V V P + +G ++ +V+ + + Sbjct: 877 KASQLNVDLAANVHGRVDVSEVFDNFGEIVDPNKPLKRFHKGDKIRVRVLGIHDSRNHKF 936 Query: 166 VVVSRRAVIESENSAE-RDQLLE---------NLQEGMEVKGIVKNLTDYGAFVDL-GGV 214 + +S R + R +L ++G EV G V N++ +V L V Sbjct: 937 LPISHRVSPKQFLELSVRPSILNMEPFSMKEPQFKKGDEVTGFVNNVSKECVWVSLTPSV 996 Query: 215 DGLLHITDMA--WKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAK 272 +G + I D+ K + + +G I V+ + S+ L +G + + Sbjct: 997 NGRIPILDLTTDVKELNSLQKHFFLGKAIKCYVVNAED-----SITLSAIGP---LQGFE 1048 Query: 273 RYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMV 332 G++L G+VTN+ + G +++ + G V +M + + +I P ++V V V Sbjct: 1049 NLTPGSRLVGKVTNVNEAGAILQLPGHMSGRVSRIDM-FDDYDILPETKFTRNNLVGVCV 1107 Query: 333 LDIDEERRRISLGLKQCK--------ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLD 384 L +D R+++L + + + + GD G + ++ + G+F+ + Sbjct: 1108 LSVDVPNRKVALSARNSRTQSQPVEIKDKEINSVDDLKIGDICRGFVCNVANQGLFVTIG 1167 Query: 385 GGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLA---EDPF 441 + V + ++ ++ ++ + + ++ +D + +RI + +KQ Sbjct: 1168 HNLIARVKIGEL-FDTFIKDWKPHFHVNQLVKGSIVGIDNDSKRIEMSLKQSKIKDSSEI 1226 Query: 442 NNWVALNKKGAIVTGKVTAVDAKGATVELA--DGVEGYLRASEASRDRVEDATLVLSVGD 499 A G+ + G V V G + + D + G SE + V + + + S GD Sbjct: 1227 TKTFADIAVGSNLDGTVVKVGDYGVLIRIDGTDNIVGLCHKSEIADAVVLNISKLYSSGD 1286 Query: 500 EVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQE 538 +V A VD + R I+L +++ + D + N+++ Sbjct: 1287 KVRAHVLDVDSEKRRIALGLKSSYFDSDSDISMSDNEED 1325 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 98/569 (17%), Positives = 196/569 (34%), Gaps = 62/569 (10%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE----------- 59 +SL+ PGS++ G + I+ + V +P + + Sbjct: 99 QSLRYKNITPGSLILGQIAQINTLDLAVSLPNCLTGYVPITNISDKLSDRLDSIDNHAED 158 Query: 60 -----------------LEIQVGDEVDVALDAV------EDGFGETLLSREKAKRHEAWI 96 +VG V V++ A+ + G LS + + + Sbjct: 159 NAATEEEDGLNQIPDLMDLYKVGQWVRVSVTALGSENTTKTGKRHIELSLKPQDANGSAP 218 Query: 97 TLEKAYEDAETVTGVINGKVKGGFT--VELNGIRAFLPGSLVDVRPVRDTLHLEGKELEF 154 + + V++ G + +N FL + + D +EG+ L Sbjct: 219 EAAD-FVAGSMIQAVVSSIEDHGIVFDIGINNYTGFL-----SKKHINDFPFVEGQSLLC 272 Query: 155 KVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV 214 VI + + + S + E ++ + G + +V ++ + G GV Sbjct: 273 SVISKEDR----IFHLSLTATSTKALEVMPSVQAILPGDYINVLVTDIKESGVIAKYMGV 328 Query: 215 -DGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDR-ERTRVSLG-----LKQLGEDPW 267 D I + + + + + + +VL + ++++ L P Sbjct: 329 VDVTSDIYHSSPVKGEDLEDKFQLAKSVPARVLFVIPGDPPKIAVSFLPHVLTFNFATPN 388 Query: 268 VAIAKRYPEGTKLTG-RVTNLTD-YGCFVEIE-EGVEGLVHVSEMDWTNK-NIHPSK-VV 322 + G + +VT ++ G F ++ + G H+S + I P+ Sbjct: 389 TPHPDQLDIGFIVNAAKVTYVSSSLGVFCDVGVPEISGFAHISRLSDKKVAGISPNSGPY 448 Query: 323 NVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIG 382 V E +++ L +Q N E G V+G I + GI + Sbjct: 449 KVDSTHEARIINYSYVDNLYILSFQQSVLNQQFLRIEDIEVGQFVDGTIAKLIPQGIVVT 508 Query: 383 LDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAED--- 439 + GI+GLV + ++ ++A + R +K G + VL + R+R+ L +K+ + Sbjct: 509 ISEGINGLVPSTHMA-DIALQFPERRFKVGSSVKCRVLSTNVLRKRVLLTLKKSLLNTDL 567 Query: 440 PFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGD 499 P G G + + GA VE + V +L SE S + DA VG Sbjct: 568 PLIYDYEQATPGTQTVGTLARIFEDGAIVEFYNSVRAFLPVSEMSEAYIRDAREHFKVGQ 627 Query: 500 EVEAKFTGVDRKNRAISLSVRAKDEADEK 528 + D +NR + + R + ++ Sbjct: 628 TLSVTIVSCDPENRKMRVGCREQSWDAKR 656 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 82/359 (22%), Positives = 140/359 (38%), Gaps = 34/359 (9%) Query: 12 SLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL-----EIQVGD 66 S+KE + + G V G V + K+ V V IP EL +G Sbjct: 964 SMKEPQFKKGDEVTGFVNNVSKECVWVSLTPSVNGRIPILDLTTDVKELNSLQKHFFLGK 1023 Query: 67 EVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNG 126 + + ED LS + + L + G + + G ++L G Sbjct: 1024 AIKCYVVNAEDS---ITLS--AIGPLQGFENLTP----GSRLVGKVTNVNEAGAILQLPG 1074 Query: 127 IRAFLPGSLVDVRPVRDTLHLEGKELE------FKVIKLDQKRNNVVVSRRAVIES---- 176 + G + + D L + V+ +D V +S R Sbjct: 1075 H---MSGRVSRIDMFDDYDILPETKFTRNNLVGVCVLSVDVPNRKVALSARNSRTQSQPV 1131 Query: 177 ENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIV 235 E + +++L+ G +G V N+ + G FV +G + + I ++ +K Sbjct: 1132 EIKDKEINSVDDLKIGDICRGFVCNVANQGLFVTIGHNLIARVKIGELFDTFIKDWKPHF 1191 Query: 236 NVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYP---EGTKLTGRVTNLTDYGC 292 +V + ++ D + R+ + LKQ I K + G+ L G V + DYG Sbjct: 1192 HVNQLVKGSIVGIDNDSKRIEMSLKQSKIKDSSEITKTFADIAVGSNLDGTVVKVGDYGV 1251 Query: 293 FVEIE--EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC 349 + I+ + + GL H SE+ ++ SK+ + GD V VLD+D E+RRI+LGLK Sbjct: 1252 LIRIDGTDNIVGLCHKSEIADAV-VLNISKLYSSGDKVRAHVLDVDSEKRRIALGLKSS 1309 Score = 124 bits (311), Expect = 9e-27, Method: Composition-based stats. Identities = 68/440 (15%), Positives = 144/440 (32%), Gaps = 37/440 (8%) Query: 137 DVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLE--NLQEG 192 + + D + L G+ + V L + R + + E + G Sbjct: 167 GLNQIPDLMDLYKVGQWVRVSVTALGSENTTKTGKRHIELSLKPQDANGSAPEAADFVAG 226 Query: 193 MEVKGIVKNLTDYGAFVDLG--GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDR 250 ++ +V ++ D+G D+G G L + G + V+ + Sbjct: 227 SMIQAVVSSIEDHGIVFDIGINNYTGFLSKKHINDFP-------FVEGQSLLCSVISKED 279 Query: 251 ERTRVSL---GLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHV- 306 +SL K L P V G + VT++ + G + G+V V Sbjct: 280 RIFHLSLTATSTKALEVMPSVQAIL---PGDYINVLVTDIKESGVIAKYM----GVVDVT 332 Query: 307 SEMDWT--NKNIHPSKVVNVGDVVEVMVLDIDEERR-RISLG-----LKQCKANPWQQFA 358 S++ + K + V VL + +I++ L A P Sbjct: 333 SDIYHSSPVKGEDLEDKFQLAKSVPARVLFVIPGDPPKIAVSFLPHVLTFNFATPNTPHP 392 Query: 359 ETHNKGDRVEG-KIKSITD-FGIFIGLD-GGIDGLVHLSDISWNVA--GEEAVREYKKGD 413 + + G V K+ ++ G+F + I G H+S +S YK Sbjct: 393 DQLDIGFIVNAAKVTYVSSSLGVFCDVGVPEISGFAHISRLSDKKVAGISPNSGPYKVDS 452 Query: 414 EIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADG 473 A ++ L +Q + + + G V G + + +G V +++G Sbjct: 453 THEARIINYSYVDNLYILSFQQSVLNQQFLRIEDIEVGQFVDGTIAKLIPQGIVVTISEG 512 Query: 474 VEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIAT 533 + G + ++ + ++ VG V+ + + + + L+++ + I Sbjct: 513 INGLVPSTHMADIALQFPERRFKVGSSVKCRVLSTNVLRKRVLLTLKKSLLNTDLPLIYD 572 Query: 534 VNKQEDANFSNNAMAEAFKA 553 + + +A F+ Sbjct: 573 YEQATPGTQTVGTLARIFED 592 Score = 76.5 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 67/380 (17%), Positives = 125/380 (32%), Gaps = 58/380 (15%) Query: 175 ESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWK------- 226 E+ + +N+ G + G + + V L + G + IT+++ K Sbjct: 92 ENLKVHIQSLRYKNITPGSLILGQIAQINTLDLAVSLPNCLTGYVPITNISDKLSDRLDS 151 Query: 227 ------------------RVKHPSEIVNVGDEITVKVLKFDRE------RTRVSLGLKQL 262 ++ ++ VG + V V E + + L LK Sbjct: 152 IDNHAEDNAATEEEDGLNQIPDLMDLYKVGQWVRVSVTALGSENTTKTGKRHIELSLKPQ 211 Query: 263 GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE-EGVEGLVHVSEMDWTNKNIHPSKV 321 + A + G+ + V+++ D+G +I G + ++ Sbjct: 212 DANGSAPEAADFVAGSMIQAVVSSIEDHGIVFDIGINNYTGFLSKKHINDFP-------- 263 Query: 322 VNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFI 381 G + V+ ++ +SL KA + GD + + I + G+ Sbjct: 264 FVEGQSLLCSVISKEDRIFHLSLTATSTKALEVMPSVQAILPGDYINVLVTDIKESGVIA 323 Query: 382 GLDGGIDGLVHLSDI--SWNVAGEEAVREYKKGDEIAAVVLQV---DAERERISLGVKQL 436 G +D SDI S V GE+ +++ + A VL V D + +S L Sbjct: 324 KYMGVVDV---TSDIYHSSPVKGEDLEDKFQLAKSVPARVLFVIPGDPPKIAVSFLPHVL 380 Query: 437 AED---PFNNWVALNKKGAIVT-GKVTAVDAK-GATVELA-DGVEGYLRASEASRDRVED 490 + P G IV KVT V + G ++ + G+ S S +V Sbjct: 381 TFNFATPNTPHPDQLDIGFIVNAAKVTYVSSSLGVFCDVGVPEISGFAHISRLSDKKVAG 440 Query: 491 ATL---VLSVGDEVEAKFTG 507 + V EA+ Sbjct: 441 ISPNSGPYKVDSTHEARIIN 460 Score = 43.0 bits (100), Expect = 0.029, Method: Composition-based stats. Identities = 19/135 (14%), Positives = 43/135 (31%), Gaps = 31/135 (22%) Query: 446 ALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASR-------------------- 485 G+++ G++ ++ V L + + GY+ + S Sbjct: 104 KNITPGSLILGQIAQINTLDLAVSLPNCLTGYVPITNISDKLSDRLDSIDNHAEDNAATE 163 Query: 486 -----DRVEDATLVLSVGDEVEAKFTGVDRKN------RAISLSVRAKDEADEKDAIATV 534 +++ D + VG V T + +N R I LS++ +D A Sbjct: 164 EEDGLNQIPDLMDLYKVGQWVRVSVTALGSENTTKTGKRHIELSLKPQDANGSAPEAADF 223 Query: 535 NKQEDANFSNNAMAE 549 +++ + Sbjct: 224 VAGSMIQAVVSSIED 238 >UniRef50_B8JIP9 Programmed cell death 11 n=5 Tax=Clupeocephala RepID=B8JIP9_DANRE Length = 1816 Score = 211 bits (538), Expect = 5e-53, Method: Composition-based stats. Identities = 98/519 (18%), Positives = 198/519 (38%), Gaps = 27/519 (5%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVE 76 PG ++ G V + ++V + + E G E+ + V+ Sbjct: 268 NLLPGLLIHGCVKRVTPHGLIVTFLSSFTGVVDFLHL-DEDKESTYSKGQEILARILYVQ 326 Query: 77 DGFGETLLSREK--AKRHEAWITLEKAYEDAETVTGVINGKV---KGGFTVELNGIRAFL 131 + LS A + L + E V G + G L+G RAF+ Sbjct: 327 PSTRQVGLSLRSHLLPPGGAVLDLHFSERVGEVVQGCQMTSLHHYSGALMKMLDGSRAFV 386 Query: 132 PGSLVDVRPVR-DTLHLEGKELEF-KVIKLDQKRNNVVVSRRAVIESENSAERDQLLENL 189 +L+ DT HL + ++I + R + +++ Sbjct: 387 HRNLLKEPKEELDTNHLMSQTQHILRIINYSPIEQIYQATLRW----SSIETPFFSCQDI 442 Query: 190 QEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKF 248 + G V+G V +L +G +V +G + G++ +A +K+P + G ++ +VL Sbjct: 443 KVGQIVEGTVTDLQKHGVYVRIGEHIRGMIPRIHLADVTLKNPEKKFYPGLKVKCRVLLV 502 Query: 249 DRERTRVSLGLKQLGEDPWVAIAKRYP---EGTKLTGRVTNLTDYGCFVEIEEGVEGLVH 305 + ++ + L K+ + + I + Y G G V + ++GC V E V+GLV Sbjct: 503 EAQKKLLILTRKKALVESTLPIFQSYSDARPGRISHGFVVCIKEFGCIVRFYEDVKGLVP 562 Query: 306 VSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN---PWQQFAETHN 362 + E+ T +P ++ VG VV+V VL DEE++ + L K Q Sbjct: 563 MQELT-TETVTNPEELFFVGQVVKVKVLKCDEEKKMLRLSFKSVTEEDVREEQIAKFDFI 621 Query: 363 KGDRVEGKIKSITDFGIFIGL-DGGIDGLVHLSDISWNVAGEEAV-REYKKGDEIAAVVL 420 G V+ ++ G+ + + + + + +S +V + ++GD I ++ Sbjct: 622 VGKMVDARVCRKVLNGLEVSIIPEEVQAFLPTTHLSDHVTNCLPLWMALEEGDTICNLMC 681 Query: 421 QVDAERERISLGVKQ-----LAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVE 475 + +++ I L K + + + + G + G V + G + GV Sbjct: 682 LTNYKKKGIVLTKKPHLKAYIEDGAIPKNFSELQVGMQMVGWVKNIMPYGVFISFPYGVF 741 Query: 476 GYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRA 514 G + +++ + + + V AK T +D + + Sbjct: 742 GLAPIANMGDQFIKETSGIFDIDQTVVAKVTNLDEEKQR 780 Score = 204 bits (520), Expect = 5e-51, Method: Composition-based stats. Identities = 93/552 (16%), Positives = 212/552 (38%), Gaps = 53/552 (9%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE----------------- 59 + G+++ G V + V+V +P +A Sbjct: 77 DLTVGTLMLGCVKEVSDFEVVVGLPSGLVGYLPICNICDAYTNILNDKLDTDDGLEEVVP 136 Query: 60 --LEIQVGDEVDVALDAVE---DGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVING 114 +G + + +++ +G LS ++A ++ A + A T++G + Sbjct: 137 LSKLFTLGMLIRCVVSSLDSAKEGHISLKLSINPKDVNKALNSV--ALKPAMTLSGCVES 194 Query: 115 KVKGGFTVELN--GIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSR-- 170 G+ V++ G +AFLP G+ + + + V +S+ Sbjct: 195 VEDHGYLVDIGIGGTKAFLPK----KSTSSKQDLYVGQYVLVLIEDVKDSGRVVRLSQNP 250 Query: 171 RAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFV----DLGGVDGLLHITDMAWK 226 +A++++ ++ L+NL G+ + G VK +T +G V GV LH+ + Sbjct: 251 QALVKACAQTKQGWTLDNLLPGLLIHGCVKRVTPHGLIVTFLSSFTGVVDFLHLDE---- 306 Query: 227 RVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLT----G 282 + G EI ++L +V L L+ P A+ + Sbjct: 307 ---DKESTYSKGQEILARILYVQPSTRQVGLSLRSHLLPPGGAVLDLHFSERVGEVVQGC 363 Query: 283 RVTNLTDY-GCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRR 341 ++T+L Y G +++ +G VH + + + + + +++ + + +++ + Sbjct: 364 QMTSLHHYSGALMKMLDGSRAFVHRNLLKEPKEELDTNHLMSQTQHI-LRIINYSPIEQI 422 Query: 342 ISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVA 401 L+ + G VEG + + G+++ + I G++ ++ +V Sbjct: 423 YQATLRWSSIETPFFSCQDIKVGQIVEGTVTDLQKHGVYVRIGEHIRGMIPRIHLA-DVT 481 Query: 402 GEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAED---PFNNWVALNKKGAIVTGKV 458 + +++ G ++ VL V+A+++ + L K+ + P + + G I G V Sbjct: 482 LKNPEKKFYPGLKVKCRVLLVEAQKKLLILTRKKALVESTLPIFQSYSDARPGRISHGFV 541 Query: 459 TAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLS 518 + G V + V+G + E + + V + + VG V+ K D + + + LS Sbjct: 542 VCIKEFGCIVRFYEDVKGLVPMQELTTETVTNPEELFFVGQVVKVKVLKCDEEKKMLRLS 601 Query: 519 VRAKDEADEKDA 530 ++ E D ++ Sbjct: 602 FKSVTEEDVREE 613 Score = 175 bits (445), Expect = 3e-42, Method: Composition-based stats. Identities = 94/515 (18%), Positives = 199/515 (38%), Gaps = 35/515 (6%) Query: 10 EESLKEIETRPGSIVRGVVVAIDKDVVLVDAG-LKSESAIPAEQFKNAQGELEIQVGDEV 68 ++L + +P + G V +++ LVD G +++ +P K+ + ++ VG V Sbjct: 174 NKALNSVALKPAMTLSGCVESVEDHGYLVDIGIGGTKAFLPK---KSTSSKQDLYVGQYV 230 Query: 69 DVALDAVEDGFGETLLSREKAKRHEAWITLEKAYED-----AETVTGVINGKVKGGFTV- 122 V ++ V+D LS+ +A ++ + + G + G V Sbjct: 231 LVLIEDVKDSGRVVRLSQNPQALVKACAQTKQGWTLDNLLPGLLIHGCVKRVTPHGLIVT 290 Query: 123 ---ELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 G+ FL + +++ + +G+E+ +++ + V +S R+ + Sbjct: 291 FLSSFTGVVDFL-----HLDEDKESTYSKGQEILARILYVQPSTRQVGLSLRSHLLPPGG 345 Query: 180 AERDQLLENLQEGMEVKG-IVKNLTDY-GAFVD-LGGVDGLLHITDMAWKRVKHPSEIVN 236 A D + G V+G + +L Y GA + L G +H + + + + + Sbjct: 346 AVLDLHFSE-RVGEVVQGCQMTSLHHYSGALMKMLDGSRAFVHRNLLKEPKEELDTNHLM 404 Query: 237 VGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI 296 + ++++ + L+ + + G + G VT+L +G +V I Sbjct: 405 SQTQHILRIINYSPIEQIYQATLRWSSIETPFFSCQDIKVGQIVEGTVTDLQKHGVYVRI 464 Query: 297 EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN---P 353 E + G++ + +P K G V+ VL ++ +++ + L K+ P Sbjct: 465 GEHIRGMIPRIHLA-DVTLKNPEKKFYPGLKVKCRVLLVEAQKKLLILTRKKALVESTLP 523 Query: 354 WQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGD 413 Q G G + I +FG + + GLV + +++ + G Sbjct: 524 IFQSYSDARPGRISHGFVVCIKEFGCIVRFYEDVKGLVPMQELTTETV-TNPEELFFVGQ 582 Query: 414 EIAAVVLQVDAERERISLGVKQL-AEDPFNNWVALNK--KGAIVTGKVTAVDAKGATVE- 469 + VL+ D E++ + L K + ED +A G +V +V G V Sbjct: 583 VVKVKVLKCDEEKKMLRLSFKSVTEEDVREEQIAKFDFIVGKMVDARVCRKVLNGLEVSI 642 Query: 470 LADGVEGYLRASEASRDRVED---ATLVLSVGDEV 501 + + V+ +L + S D V + + L GD + Sbjct: 643 IPEEVQAFLPTTHLS-DHVTNCLPLWMALEEGDTI 676 Score = 158 bits (401), Expect = 4e-37, Method: Composition-based stats. Identities = 94/494 (19%), Positives = 196/494 (39%), Gaps = 57/494 (11%) Query: 105 AETVTGVINGKVKGGFTVEL-NGIRAFLPGSLVDVRPVRDTLH--LEGKELEFKVIKLDQ 161 + V G + K G V + IR +P + +++ G +++ +V+ ++ Sbjct: 445 GQIVEGTVTDLQKHGVYVRIGEHIRGMIPRIHLADVTLKNPEKKFYPGLKVKCRVLLVEA 504 Query: 162 KRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHI 220 ++ ++++R+ + E++ Q + + G G V + ++G V V GL+ + Sbjct: 505 QKKLLILTRKKAL-VESTLPIFQSYSDARPGRISHGFVVCIKEFGCIVRFYEDVKGLVPM 563 Query: 221 TDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGED---PWVAIAKRYPEG 277 ++ + V +P E+ VG + VKVLK D E+ + L K + E+ + G Sbjct: 564 QELTTETVTNPEELFFVGQVVKVKVLKCDEEKKMLRLSFKSVTEEDVREEQIAKFDFIVG 623 Query: 278 TKLTGRVTNLTDYGCFVEI-EEGVEGLVHVSEMDWTNKNIHPS-KVVNVGDVVEVMVLDI 335 + RV G V I E V+ + + + N P + GD + ++ Sbjct: 624 KMVDARVCRKVLNGLEVSIIPEEVQAFLPTTHLSDHVTNCLPLWMALEEGDTICNLMCLT 683 Query: 336 DEERRRISLGLKQ-----CKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGL 390 + +++ I L K + + G ++ G +K+I +G+FI G+ GL Sbjct: 684 NYKKKGIVLTKKPHLKAYIEDGAIPKNFSELQVGMQMVGWVKNIMPYGVFISFPYGVFGL 743 Query: 391 VHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISL------------------- 431 ++++ + +E + + A V +D E++R + Sbjct: 744 APIANMG-DQFIKETSGIFDIDQTVVAKVTNLDEEKQRFLVSLKLSELSLSENEFHTRLI 802 Query: 432 -GVKQLA----------EDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGY-LR 479 G+K+ + ++ G + V G+ + +D + G + Sbjct: 803 QGLKERRNISEMRAGRGDSDVLWKLSALTVGDQMKMIVGDTTEDGSVMLTSDQLSGVTVL 862 Query: 480 ASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRA----KDEADEKDAIATVN 535 AS+ ++ V L+ G ++ A +D + +S+R K E EKDA T Sbjct: 863 ASKYHKEGVN-----LTPGCKLNAVILHIDFVKSQVHVSLRPKLNIKKEKLEKDARFTAK 917 Query: 536 KQ-EDANFSNNAMA 548 Q D +F+ ++A Sbjct: 918 VQFADKDFAVVSLA 931 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 96/540 (17%), Positives = 188/540 (34%), Gaps = 59/540 (10%) Query: 13 LKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA---QGELEIQVGDEVD 69 + + G IV G V + K V V G IP + E + G +V Sbjct: 437 FSCQDIKVGQIVEGTVTDLQKHGVYVRIGEHIRGMIPRIHLADVTLKNPEKKFYPGLKVK 496 Query: 70 VALDAVEDGFGETLLSREKAKRHEAWITLEKAYED--AETVTGVINGKVKGGFTVEL-NG 126 + VE +L+R+KA + + G + + G V Sbjct: 497 CRVLLVEAQKKLLILTRKKALVESTLPIFQSYSDARPGRISHGFVVCIKEFGCIVRFYED 556 Query: 127 IRAFLPGSLVDVRPVRDTLH--LEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQ 184 ++ +P + V + G+ ++ KV+K D+++ + +S ++V E + E+ Sbjct: 557 VKGLVPMQELTTETVTNPEELFFVGQVVKVKVLKCDEEKKMLRLSFKSVTEEDVREEQIA 616 Query: 185 LLENLQEGMEVKGIVKNLTDYGAFVDL--GGVDGLLHITDMAWKRVK--HPSEIVNVGDE 240 + + G V V G V + V L T ++ + GD Sbjct: 617 KFDFI-VGKMVDARVCRKVLNGLEVSIIPEEVQAFLPTTHLSDHVTNCLPLWMALEEGDT 675 Query: 241 ITVKVLKFDRERTRVSLG----LKQLGEDPWV-AIAKRYPEGTKLTGRVTNLTDYGCFVE 295 I + + ++ + L LK ED + G ++ G V N+ YG F+ Sbjct: 676 ICNLMCLTNYKKKGIVLTKKPHLKAYIEDGAIPKNFSELQVGMQMVGWVKNIMPYGVFIS 735 Query: 296 IEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLG---------- 345 GV GL ++ M S + ++ V V ++DEE++R + Sbjct: 736 FPYGVFGLAPIANM-GDQFIKETSGIFDIDQTVVAKVTNLDEEKQRFLVSLKLSELSLSE 794 Query: 346 -------------------LKQCKANPWQQFA-ETHNKGDRVEGKIKSITDFGIFIGLDG 385 ++ + + + GD+++ + T+ G + Sbjct: 795 NEFHTRLIQGLKERRNISEMRAGRGDSDVLWKLSALTVGDQMKMIVGDTTEDGSVMLTSD 854 Query: 386 GIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWV 445 + G ++ ++ E G ++ AV+L +D + ++ + ++ N Sbjct: 855 QLSG---VTVLASKYHKEGV--NLTPGCKLNAVILHIDFVKSQVHVSLRPKL----NIKK 905 Query: 446 ALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKF 505 +K A T KV D A V LA + + + + D + SVG ++ K Sbjct: 906 EKLEKDARFTAKVQFADKDFAVVSLATTSDLTFFPTRPHLNSIFD-SKKFSVGSCLDVKV 964 Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats. Identities = 97/509 (19%), Positives = 190/509 (37%), Gaps = 59/509 (11%) Query: 54 KNAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVIN 113 K + + + G +++ + ++ + +S + ++ E T + Sbjct: 865 KYHKEGVNLTPGCKLNAVILHIDFVKSQVHVSLRPKLNIK-----KEKLEKDARFTAKVQ 919 Query: 114 GKVKGGFTVEL---NGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSR 170 K V L + + F ++ G L+ KV D ++ Sbjct: 920 FADKDFAVVSLATTSDLTFFPTRPHLNSIFDSKKFS-VGSCLDVKVD--DPNCEDLAGFP 976 Query: 171 RAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRV- 228 +S N+ + G +K VK L V+L G G +H++ + Sbjct: 977 LISYQSSNAKHEQHKPNEERLGELMKVTVKKLKALCVLVNLPSGNTGRVHVSQILEFPDI 1036 Query: 229 -KHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNL 287 P+ ++ VG E+ +V+ R L + + + K++ V L Sbjct: 1037 GSCPTSVLKVGMEMEARVIGGRAVRAHNFLAISHPDYNISIPELSFLESKLKVSDMVNKL 1096 Query: 288 TDY------GCF------------VEIEEGVEGLVHVSEMDWTNK---NIHPSKVVNVGD 326 Y CF V ++ + G V + + NK + HP ++ G Sbjct: 1097 EKYKPGDDIICFPSKYIKKEQLLEVHVKPDIMGAVPL--LAMCNKLGLSKHPQRLFKPGQ 1154 Query: 327 VVEVMVLDIDEERR-RISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDF-GIFIGLD 384 + V+ +D ++ + SL L G ++ I G+ + L Sbjct: 1155 ALSAKVVSVDPKKPIQFSLSLTGT---------HKLEPGMNTLAMVQKIQPHKGLMLALP 1205 Query: 385 GGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQL-------A 437 GL HL+D+S + E+ + YK+G I V++ + +SL +L Sbjct: 1206 YENTGLAHLTDLSDSYT-EKPLESYKEGQIIRCHVIEQKIKEFNVSLRPSRLNKDKHDIV 1264 Query: 438 EDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLS- 496 EDP +A K+G + G V++V+ +G + L+ + G + A++ + D +++ Sbjct: 1265 EDPEIQSIADIKEGQSIRGYVSSVNDQGIFLRLSRTITGRVLFQNATKYYMNDPKVLIKH 1324 Query: 497 VGDE--VEAKFTGVDRKNRAISLSVRAKD 523 VG V AK VD +N ++LS+ +KD Sbjct: 1325 VGQNALVAAKVLSVDSENLHVNLSLLSKD 1353 Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats. Identities = 68/435 (15%), Positives = 149/435 (34%), Gaps = 38/435 (8%) Query: 125 NGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQ 184 +G+ +P S + G + V LD + + + ++ + + + Sbjct: 129 DGLEEVVPLSKL---------FTLGMLIRCVVSSLDSAKEGHISLKLSINPKDVNKALNS 179 Query: 185 LLENLQEGMEVKGIVKNLTDYGAFVDLG--GVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 + L+ M + G V+++ D+G VD+G G L K+ + + VG + Sbjct: 180 V--ALKPAMTLSGCVESVEDHGYLVDIGIGGTKAFLP------KKSTSSKQDLYVGQYVL 231 Query: 243 VKVLKFDRERTRVSLG------LKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI 296 V + V L +K + G + G V +T +G V Sbjct: 232 VLIEDVKDSGRVVRLSQNPQALVKACAQTKQGWTLDNLLPGLLIHGCVKRVTPHGLIVTF 291 Query: 297 EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQ 356 G+V +D ++ + G + +L + R++ L L+ P Sbjct: 292 LSSFTGVVDFLHLDEDKEST-----YSKGQEILARILYVQPSTRQVGLSLRSHLLPPGGA 346 Query: 357 FAETH---NKGDRVEG-KIKSITDF-GIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKK 411 + H G+ V+G ++ S+ + G + + G VH ++ E Sbjct: 347 VLDLHFSERVGEVVQGCQMTSLHHYSGALMKMLDGSRAFVHR-NLLKEPKEELDTNHLMS 405 Query: 412 GDEIAAVVLQVDAERERISLGVK-QLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVEL 470 + ++ + ++ E PF + K G IV G VT + G V + Sbjct: 406 QTQHILRIINYSPIEQIYQATLRWSSIETPFFS-CQDIKVGQIVEGTVTDLQKHGVYVRI 464 Query: 471 ADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDA 530 + + G + + +++ G +V+ + V+ + + + L+ + Sbjct: 465 GEHIRGMIPRIHLADVTLKNPEKKFYPGLKVKCRVLLVEAQKKLLILTRKKALVESTLPI 524 Query: 531 IATVNKQEDANFSNN 545 + + S+ Sbjct: 525 FQSYSDARPGRISHG 539 >UniRef50_B7FU58 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FU58_PHATR Length = 284 Score = 210 bits (536), Expect = 9e-53, Method: Composition-based stats. Identities = 69/277 (24%), Positives = 136/277 (49%), Gaps = 14/277 (5%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK---NAQGE 59 + FA+ +E E ++V+G V LVD G K+ + +P ++ + E Sbjct: 8 DEFAKAVDE--TEYGFERNAVVQGTAVEYSGSGCLVDIGAKASAYLPDQEASLDQDLNIE 65 Query: 60 LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGG 119 + + ++ + + ED G+ L+S ++ + +AW + E+ + + + +GG Sbjct: 66 DAVPLDTPMEFQIISEEDENGQLLVSIKRIEYKKAWEKVLSMAEEDQILEAKVIAVNRGG 125 Query: 120 FTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 + G+RAFLPGS + + + L G L+ K ++++Q+ N +VVS R + + Sbjct: 126 AICLVEGLRAFLPGSHLTGQLPDE--DLIGNNLQLKFLEVNQETNKLVVSNRKAVVEQQ- 182 Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGD 239 + +L G V G+VK L YGAFV++GG+ GLLHI+ +++ R+ +++ G Sbjct: 183 ------MADLSRGDLVAGMVKALKPYGAFVEVGGMSGLLHISQISYDRIDDLEKVLQPGM 236 Query: 240 EITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPE 276 ++ ++ D+ R++L K L +P + Sbjct: 237 QVKCMIIDHDKVNGRIALSTKTLEPEPGDMLKDPKMV 273 Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 47/284 (16%), Positives = 119/284 (41%), Gaps = 13/284 (4%) Query: 176 SENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEI 234 E + D+ + V+G + G VD+G L + + + + + Sbjct: 8 DEFAKAVDETEYGFERNAVVQGTAVEYSGSGCLVDIGAKASAYLPDQEASLDQDLNIEDA 67 Query: 235 VNVGDEITVKVLKFDRERTRVSLGLKQLG-EDPWVAIAKRYPEGTKLTGRVTNLTDYGCF 293 V + + +++ + E ++ + +K++ + W + E L +V + G Sbjct: 68 VPLDTPMEFQIISEEDENGQLLVSIKRIEYKKAWEKVLSMAEEDQILEAKVIAVNRGGAI 127 Query: 294 VEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP 353 + EG+ + S + + +G+ +++ L++++E ++ + ++ Sbjct: 128 C-LVEGLRAFLPGSHLTGQLPDEDL-----IGNNLQLKFLEVNQETNKLVVSNRKAV--- 178 Query: 354 WQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGD 413 +Q ++GD V G +K++ +G F+ + GG+ GL+H+S IS++ ++ + + G Sbjct: 179 VEQQMADLSRGDLVAGMVKALKPYGAFVEV-GGMSGLLHISQISYDRI-DDLEKVLQPGM 236 Query: 414 EIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGK 457 ++ +++ D RI+L K L +P + Sbjct: 237 QVKCMIIDHDKVNGRIALSTKTLEPEPGDMLKDPKMVFEKAEAT 280 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 110/267 (41%), Gaps = 16/267 (5%) Query: 265 DPWVAIAKRYPEGTKLTGRV----TNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSK 320 D + G + V + GC V+I + E +++++ Sbjct: 8 DEFAKAVDETEYGFERNAVVQGTAVEYSGSGCLVDIGAKASAYLPDQEASL-DQDLNIED 66 Query: 321 VVNVGDVVEVMVLDIDEERRRISLGLKQCK-ANPWQQFAETHNKGDRVEGKIKSITDFGI 379 V + +E ++ ++E ++ + +K+ + W++ + +E K+ ++ G Sbjct: 67 AVPLDTPMEFQIISEEDENGQLLVSIKRIEYKKAWEKVLSMAEEDQILEAKVIAVNRGGA 126 Query: 380 FIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAED 439 L G+ + S ++ + E+ G+ + L+V+ E ++ + ++ Sbjct: 127 IC-LVEGLRAFLPGSHLTGQLPDEDL-----IGNNLQLKFLEVNQETNKLVVSNRKAV-- 178 Query: 440 PFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGD 499 +A +G +V G V A+ GA VE+ G+ G L S+ S DR++D VL G Sbjct: 179 -VEQQMADLSRGDLVAGMVKALKPYGAFVEVG-GMSGLLHISQISYDRIDDLEKVLQPGM 236 Query: 500 EVEAKFTGVDRKNRAISLSVRAKDEAD 526 +V+ D+ N I+LS + + Sbjct: 237 QVKCMIIDHDKVNGRIALSTKTLEPEP 263 Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 56/284 (19%), Positives = 118/284 (41%), Gaps = 15/284 (5%) Query: 90 KRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRPVRDTLHLE 148 + +A E +E V G G V++ A+LP + + Sbjct: 9 EFAKAVDETEYGFERNAVVQGTAVEYSGSGCLVDIGAKASAYLPDQEASLDQDLNIEDAV 68 Query: 149 --GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYG 206 +EF++I + + ++VS + + E +++L +E ++ V + G Sbjct: 69 PLDTPMEFQIISEEDENGQLLVSIKRI---EYKKAWEKVLSMAEEDQILEAKVIAVNRGG 125 Query: 207 AFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDP 266 A + G+ L + + + P E + +G+ + +K L+ ++E ++ + ++ Sbjct: 126 AICLVEGLRAFLPGSHLTG---QLPDEDL-IGNNLQLKFLEVNQETNKLVVSNRKAVV-- 179 Query: 267 WVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGD 326 G + G V L YG FVE+ G+ GL+H+S++ + ++ KV+ G Sbjct: 180 -EQQMADLSRGDLVAGMVKALKPYGAFVEVG-GMSGLLHISQISY-DRIDDLEKVLQPGM 236 Query: 327 VVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGK 370 V+ M++D D+ RI+L K + P + ++ E Sbjct: 237 QVKCMIIDHDKVNGRIALSTKTLEPEPGDMLKDPKMVFEKAEAT 280 Score = 42.6 bits (99), Expect = 0.043, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 39/91 (42%) Query: 448 NKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTG 507 ++ A+V G G V++ YL EAS D+ + + + +E + Sbjct: 21 FERNAVVQGTAVEYSGSGCLVDIGAKASAYLPDQEASLDQDLNIEDAVPLDTPMEFQIIS 80 Query: 508 VDRKNRAISLSVRAKDEADEKDAIATVNKQE 538 + +N + +S++ + + + ++ +++ Sbjct: 81 EEDENGQLLVSIKRIEYKKAWEKVLSMAEED 111 >UniRef50_B8C8K9 RS1, ribosomal protein 1 (Fragment) n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8C8K9_THAPS Length = 287 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 80/275 (29%), Positives = 129/275 (46%), Gaps = 16/275 (5%) Query: 4 SFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQG----- 58 SFA + IV+G VV DK +VD G K+ + +P ++ Q Sbjct: 7 SFADAVAA--TDYAFNRNDIVKGTVVQYDKGGCIVDIGAKASAYLPLQEATLFQEQGQSI 64 Query: 59 ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 E I + +E + + ED G+ L+S + + EAW + + E +G Sbjct: 65 EGIIDIDEERQFEIISEEDENGQLLVSIRRIQYREAWDKVIAKQDSDEVFEAECVSVNRG 124 Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 G + G+RAFLPGS + R D L G+ L K ++++Q+ N +VVS R + E Sbjct: 125 GAIFLVEGLRAFLPGSHLTGRLPDD--DLVGQTLPLKFLEVNQEDNKLVVSNRRAVVEEQ 182 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVG 238 + L G + GIVK L YGAFV++GG+ GLLHI+ ++ R+ +++ G Sbjct: 183 -------MAELSRGDVIDGIVKALKPYGAFVEVGGMSGLLHISQISMDRITDLEQVLQPG 235 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKR 273 +I ++ D+ R++L K L +P I Sbjct: 236 QKIKCMIIDHDKVNGRIALSTKTLEPEPGDMIKDP 270 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 47/271 (17%), Positives = 107/271 (39%), Gaps = 12/271 (4%) Query: 276 EGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNK-NIHPSKVVNVGDVVEVMVLD 334 + G V GC V+I + + E + ++++ + + ++ Sbjct: 21 RNDIVKGTVVQYDKGGCIVDIGAKASAYLPLQEATLFQEQGQSIEGIIDIDEERQFEIIS 80 Query: 335 IDEERRRISLGLKQCK-ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHL 393 ++E ++ + +++ + W + + + E + S+ G I L G+ + Sbjct: 81 EEDENGQLLVSIRRIQYREAWDKVIAKQDSDEVFEAECVSVNRGGA-IFLVEGLRAFLPG 139 Query: 394 SDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAI 453 S ++ + ++ G + L+V+ E ++ + ++ +A +G + Sbjct: 140 SHLTGRLPDDDL-----VGQTLPLKFLEVNQEDNKLVVSNRRAV---VEEQMAELSRGDV 191 Query: 454 VTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNR 513 + G V A+ GA VE+ G+ G L S+ S DR+ D VL G +++ D+ N Sbjct: 192 IDGIVKALKPYGAFVEVG-GMSGLLHISQISMDRITDLEQVLQPGQKIKCMIIDHDKVNG 250 Query: 514 AISLSVRAKDEADEKDAIATVNKQEDANFSN 544 I+LS + + E A+ + Sbjct: 251 RIALSTKTLEPEPGDMIKDPARVYEMADETA 281 Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 55/278 (19%), Positives = 117/278 (42%), Gaps = 19/278 (6%) Query: 89 AKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRPVRDTLHL 147 A +A + A+ + V G + KGG V++ A+LP + + Sbjct: 6 ASFADAVAATDYAFNRNDIVKGTVVQYDKGGCIVDIGAKASAYLPLQEATL-FQEQGQSI 64 Query: 148 EG-----KELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNL 202 EG +E +F++I + + ++VS R + + D+++ + ++ Sbjct: 65 EGIIDIDEERQFEIISEEDENGQLLVSIRRI---QYREAWDKVIAKQDSDEVFEAECVSV 121 Query: 203 TDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQL 262 GA + G+ L + + + P + + VG + +K L+ ++E ++ + ++ Sbjct: 122 NRGGAIFLVEGLRAFLPGSHLTGRL---PDDDL-VGQTLPLKFLEVNQEDNKLVVSNRRA 177 Query: 263 GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVV 322 G + G V L YG FVE+ G+ GL+H+S++ ++ +V+ Sbjct: 178 VV---EEQMAELSRGDVIDGIVKALKPYGAFVEVG-GMSGLLHISQISM-DRITDLEQVL 232 Query: 323 NVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAET 360 G ++ M++D D+ RI+L K + P + Sbjct: 233 QPGQKIKCMIIDHDKVNGRIALSTKTLEPEPGDMIKDP 270 Score = 57.7 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 25/176 (14%), Positives = 70/176 (39%), Gaps = 7/176 (3%) Query: 360 THNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISW-NVAGEEAVREYKKGDEIAAV 418 N+ D V+G + G + + + L + + G+ +E Sbjct: 18 AFNRNDIVKGTVVQYDKGGCIVDIGAKASAYLPLQEATLFQEQGQSIEGIIDIDEERQFE 77 Query: 419 VLQVDAERERISLGVKQLA-EDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGY 477 ++ + E ++ + ++++ + ++ +A + + +V+ GA + L +G+ + Sbjct: 78 IISEEDENGQLLVSIRRIQYREAWDKVIAKQDSDEVFEAECVSVNRGGA-IFLVEGLRAF 136 Query: 478 LRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIAT 533 L S + +D VG + KF V++++ + +S R ++ ++ Sbjct: 137 LPGSHLTGRLPDDDL----VGQTLPLKFLEVNQEDNKLVVSNRRAVVEEQMAELSR 188 Score = 43.4 bits (101), Expect = 0.026, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 41/97 (42%), Gaps = 4/97 (4%) Query: 448 NKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEAS--RDRVEDATLVLSVGDEVEAKF 505 + IV G V D G V++ YL EA+ +++ + ++ + +E + + Sbjct: 19 FNRNDIVKGTVVQYDKGGCIVDIGAKASAYLPLQEATLFQEQGQSIEGIIDIDEERQFEI 78 Query: 506 TGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANF 542 + +N + +S+R + D + + KQ+ Sbjct: 79 ISEEDENGQLLVSIRRIQYREAWDKV--IAKQDSDEV 113 >UniRef50_A4S384 Predicted protein n=2 Tax=Ostreococcus RepID=A4S384_OSTLU Length = 1869 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 91/434 (20%), Positives = 174/434 (40%), Gaps = 33/434 (7%) Query: 21 GSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK--NAQGELEIQVGDEVDVALDAVEDG 78 G++V+GVV + LV + + +F I VG V+ + + Sbjct: 1047 GTLVKGVVSEVQNLQALVALPNNARGRLYISEFSPGEDTPLESISVGSTVEATVMGLAGD 1106 Query: 79 FGETL-LSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFLPGSLV 136 G L LS + + + + V+ + G V + GI +F+P Sbjct: 1107 RGGLLDLSMHRKSA-----FVLEDVSVGDDVSAYVVSVTDDGIKVTIAPGITSFIPKIET 1161 Query: 137 DVRPVRDTLHL-----EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQE 191 + + L G+ + ++ + + V +S R + + Sbjct: 1162 SDKSSELAMKLSSRFTVGERVSAIIVGVKATKKRVDLSLR--------TDGASGSSRVCV 1213 Query: 192 GMEVKGIVKNLTDY-GAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVL--- 246 G +V+GI+ + + G V LG G +H+TDMA + P G + V+VL Sbjct: 1214 GAKVQGIITRVVENVGLMVQLGSHSVGRVHLTDMADEYDDDPCAKYEAGQVVQVRVLNAS 1273 Query: 247 ---KFDRERTRVSLGLKQLGE-DPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 + D L K+ DP + G ++ G V + GCF+ + G++ Sbjct: 1274 SNGELDLSMRASRLSSKRTSPTDPEITDISNLVPGQRVKGYVKATSKKGCFIALSRGIDA 1333 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHN 362 + +S + + P+K G +VE ++ D + R+ L ++ A T Sbjct: 1334 MCKLSNLADSF-IADPAKTFPPGKLVEGRIVSADAAKGRVELAFRETDATQGNADVSTVK 1392 Query: 363 KGDRVEGKIKSITDFGIFIGLDG-GIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQ 421 GD + G ++ + +G+F+ LDG + GL H+S + ++ ++G+ + VL+ Sbjct: 1393 VGDVLIGTVRRVQPYGVFVSLDGTKLSGLCHISMFADARISDDLASHVRQGERVRTKVLE 1452 Query: 422 VDAERERISLGVKQ 435 ++ E +ISLG+K Sbjct: 1453 INTETNKISLGIKA 1466 Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats. Identities = 115/563 (20%), Positives = 211/563 (37%), Gaps = 73/563 (12%) Query: 21 GSIVRGVVVAIDKDVVLVDAGLK-SESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGF 79 G V+G V+ + + +VD G++ + + + +++VGD+V ++ ++ + Sbjct: 917 GDEVKGYVLDVSRREGVVDIGMRDGLGKFKRNKTSSGKSLKKLKVGDQVSAEVELIKAEY 976 Query: 80 GETLLSREK-AKRHEAWITLEKAYEDAET-------VTGVI--------------NGKVK 117 L L YEDA V VI K Sbjct: 977 VALSLPEHNGLIGFAPVHHLNLRYEDASERFTPTQCVKAVIAQLPEGEMGRLLLTVPVTK 1036 Query: 118 G--------------GFTVELNGIRAF--LPG------SLVDVRPVRDT---LHLEGKEL 152 G G E+ ++A LP + + P DT G + Sbjct: 1037 GTTASGRIAAGTLVKGVVSEVQNLQALVALPNNARGRLYISEFSPGEDTPLESISVGSTV 1096 Query: 153 EFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL- 211 E V+ L R + ++ + +LE++ G +V V ++TD G V + Sbjct: 1097 EATVMGLAGDRGGL-------LDLSMHRKSAFVLEDVSVGDDVSAYVVSVTDDGIKVTIA 1149 Query: 212 GGVDGLLHITDMAWKRVK---HPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWV 268 G+ + + + K + S VG+ ++ ++ + RV L L+ G Sbjct: 1150 PGITSFIPKIETSDKSSELAMKLSSRFTVGERVSAIIVGVKATKKRVDLSLRTDGASGSS 1209 Query: 269 AIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVV 328 + +T V N+ G V++ G VH+++M + P G VV Sbjct: 1210 RVCVGAKVQGIITRVVENV---GLMVQLGSHSVGRVHLTDMADEYDD-DPCAKYEAGQVV 1265 Query: 329 EVMVL------DIDEERRRISLGLKQCKA-NPWQQFAETHNKGDRVEGKIKSITDFGIFI 381 +V VL ++D R L K+ +P G RV+G +K+ + G FI Sbjct: 1266 QVRVLNASSNGELDLSMRASRLSSKRTSPTDPEITDISNLVPGQRVKGYVKATSKKGCFI 1325 Query: 382 GLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPF 441 L GID + LS+++ + + + + G + ++ DA + R+ L ++ Sbjct: 1326 ALSRGIDAMCKLSNLADSFIAD-PAKTFPPGKLVEGRIVSADAAKGRVELAFRETDATQG 1384 Query: 442 NNWVALNKKGAIVTGKVTAVDAKGATVELAD-GVEGYLRASEASRDRV-EDATLVLSVGD 499 N V+ K G ++ G V V G V L + G S + R+ +D + G+ Sbjct: 1385 NADVSTVKVGDVLIGTVRRVQPYGVFVSLDGTKLSGLCHISMFADARISDDLASHVRQGE 1444 Query: 500 EVEAKFTGVDRKNRAISLSVRAK 522 V K ++ + ISL ++A Sbjct: 1445 RVRTKVLEINTETNKISLGIKAS 1467 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 118/537 (21%), Positives = 194/537 (36%), Gaps = 46/537 (8%) Query: 20 PGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQ----FKNAQGELEIQVGDEVDVALDAV 75 PG +V + I D V V + + +VG + + V Sbjct: 301 PGMLVNSRIKQILSDGVSVSFMTYFSGTVDCFHTGALATSKGVSSAFKVGQRMRARIIFV 360 Query: 76 EDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL------NGIRA 129 + L+ A I L K +T +V G V L N I Sbjct: 361 DSASKRVSLTLLPHLLDYASIELPKL---GKTFQTAKIERVDAGQGVALSISDGKNDIAG 417 Query: 130 FLPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLE 187 + S + V G+ + +VI + ++S A+ L+ Sbjct: 418 YAHVSQLSDERVEKVEKKFKIGRSVSVRVI----GHRLLDGVVSVSLKSSVMAQPFFSLD 473 Query: 188 NLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVL 246 L GM V G V + YGA V L G+ L ++ + S V G ++ +VL Sbjct: 474 ELTPGMLVNGEVLAVEHYGAIVKLAEGIKALCPPLHISDIVGRTTSAKVAPGAKLKFRVL 533 Query: 247 KFDRERTRVSLGLKQL---GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGL 303 DR R ++ K+ E P + + G+ G VT + +YG FV + ++GL Sbjct: 534 NVDRNSRRATVSHKRTLIKSELPVIGQIEDAVPGSITHGVVTGVNEYGVFVSLYGDLKGL 593 Query: 304 VHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPW------QQF 357 ++++ ++ PS VG VV V V+ D R+ L L A+ Sbjct: 594 AGLNDLGLL-RDQKPSDAFGVGQVVRVQVVSADT-SGRLRLSLASGDADGNSASMIINAS 651 Query: 358 AETHNKGDRVEGKIKSITDFG------IFIGLDGGIDGLVHLSDISWNVAGEEAVR-EYK 410 A+ G VE + + G +F +G I G+V L+ +S + + + Sbjct: 652 ADALKPGHVVEKAVVTHVASGTGNVEVVFSMEEGNIPGVVPLAHLSDHPLTAQGLSAVLN 711 Query: 411 KGDEIAAVVLQVDAERERISLGVK-QLAEDPFNNWVALNKK----GAIVTGKVTAVDAKG 465 GDEI +V+ ++ + R + K L E + K GA+ G V + A G Sbjct: 712 PGDEIGPLVV-LEGKSTRAVMSRKLSLVESSREGKLPATAKEATLGAVFPGYVASATAAG 770 Query: 466 ATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVD--RKNRAISLSVR 520 V + G S+ + D + VG V A VD +SLS++ Sbjct: 771 VFVRFLGRLTGLAPPSQLTDGTTGDVHEMFPVGKTVNALILSVDTSTPTPRLSLSLK 827 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 75/348 (21%), Positives = 135/348 (38%), Gaps = 20/348 (5%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQ------VGDEVDV 70 + G V VV++ D + V S IP + + EL ++ VG+ V Sbjct: 1125 DVSVGDDVSAYVVSVTDDGIKVTIAPGITSFIPKIETSDKSSELAMKLSSRFTVGERVSA 1184 Query: 71 ALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG-GFTVELNGIR- 128 + V+ LS + A V G+I V+ G V+L Sbjct: 1185 IIVGVKATKKRVDLSLRTDGASGSSRVCVGA-----KVQGIITRVVENVGLMVQLGSHSV 1239 Query: 129 AFLPGSLVDVRPVRDT--LHLEGKELEFKVIKLDQKRN---NVVVSRRAVIESENSAERD 183 + + + D + G+ ++ +V+ ++ SR + + + Sbjct: 1240 GRVHLTDMADEYDDDPCAKYEAGQVVQVRVLNASSNGELDLSMRASRLSSKRTSPTDPEI 1299 Query: 184 QLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 + NL G VKG VK + G F+ L G+D + ++++A + P++ G + Sbjct: 1300 TDISNLVPGQRVKGYVKATSKKGCFIALSRGIDAMCKLSNLADSFIADPAKTFPPGKLVE 1359 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE-GVE 301 +++ D + RV L ++ A G L G V + YG FV ++ + Sbjct: 1360 GRIVSADAAKGRVELAFRETDATQGNADVSTVKVGDVLIGTVRRVQPYGVFVSLDGTKLS 1419 Query: 302 GLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC 349 GL H+S + + V G+ V VL+I+ E +ISLG+K Sbjct: 1420 GLCHISMFADARISDDLASHVRQGERVRTKVLEINTETNKISLGIKAS 1467 Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats. Identities = 102/522 (19%), Positives = 182/522 (34%), Gaps = 53/522 (10%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQG------------ 58 E+LK RPG+ + G++ + +++ + + Sbjct: 106 ETLKYKSLRPGAKLLGIISEVTARGLVMSLPDGLRGTVARAEVAGTSDEDDDDDDAEASL 165 Query: 59 ELEIQVGDEVDVALDAVEDGF---GETLLSREKAKRHEAWITLEKAYEDAETVTGVINGK 115 EL + G + A+ ++E G LS K E ++ + V+ Sbjct: 166 ELLYEPGQVLRCAVVSLEKGKTGGKRIELSLRLEKVCEGLTK--ESLTEGSVAPAVVQSV 223 Query: 116 VKGGFTVELN--GIRAFLPGSLV--DVRPVRDTLHLEGKELEFKVIKLDQKRN---NVVV 168 G+ + FLP V D+ +R G+ ++ + + V Sbjct: 224 EDHGYILSFGIADTSGFLPKKNVASDLGEIRK-----GRIIDVVITGAPKGNKGYFTVTS 278 Query: 169 SRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-----GGVDGLLHITDM 223 ++ + S ++ L GM V +K + G V G VD H + Sbjct: 279 DQKRIKTSVAHETSATNVDTLLPGMLVNSRIKQILSDGVSVSFMTYFSGTVDCF-HTGAL 337 Query: 224 AWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGR 283 A K S VG + +++ D RVSL L D + +I T T + Sbjct: 338 ATS--KGVSSAFKVGQRMRARIIFVDSASKRVSLTLLPHLLD-YASIELPKLGKTFQTAK 394 Query: 284 VTNL-TDYGCFVEIEEG---VEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEER 339 + + G + I +G + G HVS++ + K +G V V V+ Sbjct: 395 IERVDAGQGVALSISDGKNDIAGYAHVSQLSDE-RVEKVEKKFKIGRSVSVRVIGHRLLD 453 Query: 340 RRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLV---HLSDI 396 +S+ LK + G V G++ ++ +G + L GI L H+SDI Sbjct: 454 GVVSVSLKSSVMAQPFFSLDELTPGMLVNGEVLAVEHYGAIVKLAEGIKALCPPLHISDI 513 Query: 397 SWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQL---AEDPFNNWVALNKKGAI 453 G + G ++ VL VD R ++ K+ +E P + G+I Sbjct: 514 ----VGRTTSAKVAPGAKLKFRVLNVDRNSRRATVSHKRTLIKSELPVIGQIEDAVPGSI 569 Query: 454 VTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVL 495 G VT V+ G V L ++G ++ R + + Sbjct: 570 THGVVTGVNEYGVFVSLYGDLKGLAGLNDLGLLRDQKPSDAF 611 Score = 137 bits (346), Expect = 8e-31, Method: Composition-based stats. Identities = 93/565 (16%), Positives = 188/565 (33%), Gaps = 80/565 (14%) Query: 18 TRPGSIV-RGVVVAIDKDVVLVDAGLKSE-----SAIPAEQFKNAQGELE-----IQVGD 66 +PG +V + VV + V+ E +P + + + GD Sbjct: 655 LKPGHVVEKAVVTHVASGTGNVEVVFSMEEGNIPGVVPLAHLSDHPLTAQGLSAVLNPGD 714 Query: 67 EVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYED----AETVTGVINGKVKGGFTV 122 E+ + +E ++SR+ + + A G + G V Sbjct: 715 EIGPLVV-LEGKSTRAVMSRKLSLVESSREGKLPATAKEATLGAVFPGYVASATAAGVFV 773 Query: 123 ELNG-IRAFLPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVS---------- 169 G + P S + D + GK + ++ +D +S Sbjct: 774 RFLGRLTGLAPPSQLTDGTTGDVHEMFPVGKTVNALILSVDTSTPTPRLSLSLKVSATSS 833 Query: 170 --------RRAVIESENSAERD----------QLLENLQEGMEVKGIVKNLTDYGAFVDL 211 R + E +RD + ++L+ G + V DYG +D+ Sbjct: 834 PLSDAPLVRSFFQDIEFLDDRDVGAEDVGISPETAKSLKPGTWMDVSVNETKDYGVLMDV 893 Query: 212 G---GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLK------QL 262 V GL+ + GDE+ VL R V +G++ + Sbjct: 894 PIDSNVVGLVTPHQI------PVDTTFTAGDEVKGYVLDVSRREGVVDIGMRDGLGKFKR 947 Query: 263 GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE--GVEGLVHVSEMDWTNKNIHPSK 320 + K+ G +++ V + + + E G+ G V ++ + S+ Sbjct: 948 NKTSSGKSLKKLKVGDQVSAEVELIKAEYVALSLPEHNGLIGFAPVHHLNL--RYEDASE 1005 Query: 321 VVNVGDVVEVMVLDI-DEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGI 379 V+ ++ + + E R+ L + K + G V+G + + + Sbjct: 1006 RFTPTQCVKAVIAQLPEGEMGRLLLTVPVTKG---TTASGRIAAGTLVKGVVSEVQNLQA 1062 Query: 380 FIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERER-ISLGVKQLAE 438 + L G +++S+ S + + G + A V+ + +R + L + + + Sbjct: 1063 LVALPNNARGRLYISEFSPGE--DTPLESISVGSTVEATVMGLAGDRGGLLDLSMHRKS- 1119 Query: 439 DPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVE---DATLVL 495 + G V+ V +V G V +A G+ ++ E S E + Sbjct: 1120 ---AFVLEDVSVGDDVSAYVVSVTDDGIKVTIAPGITSFIPKIETSDKSSELAMKLSSRF 1176 Query: 496 SVGDEVEAKFTGVDRKNRAISLSVR 520 +VG+ V A GV + + LS+R Sbjct: 1177 TVGERVSAIIVGVKATKKRVDLSLR 1201 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 80/448 (17%), Positives = 157/448 (35%), Gaps = 46/448 (10%) Query: 105 AETVTGVINGKVKGGFTVEL-NGIRAFLPGSLVD-----------VRPVRDTLHLEGKEL 152 + G+I+ G + L +G+R + + V + L+ G+ L Sbjct: 116 GAKLLGIISEVTARGLVMSLPDGLRGTVARAEVAGTSDEDDDDDDAEASLELLYEPGQVL 175 Query: 153 EFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG 212 V+ L++ + R + E+L EG +V+++ D+G + G Sbjct: 176 RCAVVSLEKGKTG--GKRIELSLRLEKVCEGLTKESLTEGSVAPAVVQSVEDHGYILSFG 233 Query: 213 --GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLK----------FDRERTRVSLGLK 260 G L ++A EI G I V + ++ R+ Sbjct: 234 IADTSGFLPKKNVA----SDLGEI-RKGRIIDVVITGAPKGNKGYFTVTSDQKRIKTS-- 286 Query: 261 QLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSK 320 + + G + R+ + G V G V + S Sbjct: 287 -VAHETSATNVDTLLPGMLVNSRIKQILSDGVSVSFMTYFSGTVDCFHTGALATSKGVSS 345 Query: 321 VVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDF-GI 379 VG + ++ +D +R+SL L + K KI+ + G+ Sbjct: 346 AFKVGQRMRARIIFVDSASKRVSLTLLPHLLDYASIELPKLGK-TFQTAKIERVDAGQGV 404 Query: 380 FIGLDGG---IDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQ---VDAERERISLGV 433 + + G I G H+S +S E+ +++K G ++ V+ +D Sbjct: 405 ALSISDGKNDIAGYAHVSQLSDERV-EKVEKKFKIGRSVSVRVIGHRLLDGVVSVSLKSS 463 Query: 434 KQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATL 493 PF + + G +V G+V AV+ GA V+LA+G++ S + Sbjct: 464 VMAQ--PFFS-LDELTPGMLVNGEVLAVEHYGAIVKLAEGIKALCPPLHISDIVGRTTSA 520 Query: 494 VLSVGDEVEAKFTGVDRKNRAISLSVRA 521 ++ G +++ + VDR +R ++S + Sbjct: 521 KVAPGAKLKFRVLNVDRNSRRATVSHKR 548 >UniRef50_A9WBG5 RNA binding S1 domain protein n=2 Tax=Chloroflexus RepID=A9WBG5_CHLAA Length = 520 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 87/286 (30%), Positives = 142/286 (49%), Gaps = 26/286 (9%) Query: 176 SENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEI 234 S++ + + L++LQ GME++G V ++ YG FVD+G G DGL+HI++M+ +R++ PSE+ Sbjct: 88 SDDQPHKPRRLKDLQPGMELEGKVTSIALYGVFVDIGVGRDGLVHISEMSDRRIETPSEV 147 Query: 235 VNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYP------------------- 275 V +GD + V V + E R+SL ++ A++ Sbjct: 148 VQIGDTVKVWVKSIEPEARRISLTMRDPARAETPRRARQPQPQQQQPRRQEVDREKLAAL 207 Query: 276 -EGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLD 334 G + G +T +G F +I G +GL+HVSE+ + P V VG+ + +L+ Sbjct: 208 RVGDVVEGVITGFAPFGAFADIGVGKDGLIHVSELAEG-RVEKPEDAVKVGERYQFKILE 266 Query: 335 IDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLS 394 ID E RISL L++ Q + G +EG + I FG F+ + G DGLVH+S Sbjct: 267 IDGEAARISLSLRRAL---RTQRMQQLETGQILEGTVSGIAPFGAFVDIGVGRDGLVHIS 323 Query: 395 DISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDP 440 ++ + + V L VD + +RISL ++ E P Sbjct: 324 ALAPHRVEKVEDVVKVGDKVKVKV-LGVDQQSKRISLTMRLEEEQP 368 Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 87/275 (31%), Positives = 139/275 (50%), Gaps = 25/275 (9%) Query: 272 KRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVM 331 K G +L G+VT++ YG FV+I G +GLVH+SEM + PS+VV +GD V+V Sbjct: 99 KDLQPGMELEGKVTSIALYGVFVDIGVGRDGLVHISEMS-DRRIETPSEVVQIGDTVKVW 157 Query: 332 VLDIDEERRRISLGLKQ--------------------CKANPWQQFAETHNKGDRVEGKI 371 V I+ E RRISL ++ + ++ GD VEG I Sbjct: 158 VKSIEPEARRISLTMRDPARAETPRRARQPQPQQQQPRRQEVDREKLAALRVGDVVEGVI 217 Query: 372 KSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISL 431 FG F + G DGL+H+S+++ E+ K G+ +L++D E RISL Sbjct: 218 TGFAPFGAFADIGVGKDGLIHVSELAEGRV-EKPEDAVKVGERYQFKILEIDGEAARISL 276 Query: 432 GVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDA 491 +++ + + G I+ G V+ + GA V++ G +G + S + RVE Sbjct: 277 SLRRALR---TQRMQQLETGQILEGTVSGIAPFGAFVDIGVGRDGLVHISALAPHRVEKV 333 Query: 492 TLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEAD 526 V+ VGD+V+ K GVD++++ ISL++R ++E Sbjct: 334 EDVVKVGDKVKVKVLGVDQQSKRISLTMRLEEEQP 368 Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats. Identities = 50/195 (25%), Positives = 83/195 (42%), Gaps = 21/195 (10%) Query: 359 ETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAV 418 + G +EGK+ SI +G+F+ + G DGLVH+S++S + E + GD + Sbjct: 99 KDLQPGMELEGKVTSIALYGVFVDIGVGRDGLVHISEMS-DRRIETPSEVVQIGDTVKVW 157 Query: 419 VLQVDAERERISLGVKQLAEDPF--------------------NNWVALNKKGAIVTGKV 458 V ++ E RISL ++ A +A + G +V G + Sbjct: 158 VKSIEPEARRISLTMRDPARAETPRRARQPQPQQQQPRRQEVDREKLAALRVGDVVEGVI 217 Query: 459 TAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLS 518 T GA ++ G +G + SE + RVE + VG+ + K +D + ISLS Sbjct: 218 TGFAPFGAFADIGVGKDGLIHVSELAEGRVEKPEDAVKVGERYQFKILEIDGEAARISLS 277 Query: 519 VRAKDEADEKDAIAT 533 +R + T Sbjct: 278 LRRALRTQRMQQLET 292 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 70/276 (25%), Positives = 123/276 (44%), Gaps = 33/276 (11%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE---IQVGDEVDVALD 73 + +PG + G V +I V VD G+ + + + + + E +Q+GD V V + Sbjct: 100 DLQPGMELEGKVTSIALYGVFVDIGVGRDGLVHISEMSDRRIETPSEVVQIGDTVKVWVK 159 Query: 74 AVEDGFGETLLSREKAKRHEAWITLEK-------------------AYEDAETVTGVING 114 ++E L+ R E + A + V GVI G Sbjct: 160 SIEPEARRISLTMRDPARAETPRRARQPQPQQQQPRRQEVDREKLAALRVGDVVEGVITG 219 Query: 115 KVKGGFTVELN-GIRAFLPGSLVDVRPVRDTLH--LEGKELEFKVIKLDQKRNNVVVSRR 171 G ++ G + S + V G+ +FK++++D + + +S R Sbjct: 220 FAPFGAFADIGVGKDGLIHVSELAEGRVEKPEDAVKVGERYQFKILEIDGEAARISLSLR 279 Query: 172 AVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKH 230 + R Q ++ L+ G ++G V + +GAFVD+G G DGL+HI+ +A RV+ Sbjct: 280 RAL-------RTQRMQQLETGQILEGTVSGIAPFGAFVDIGVGRDGLVHISALAPHRVEK 332 Query: 231 PSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDP 266 ++V VGD++ VKVL D++ R+SL ++ E P Sbjct: 333 VEDVVKVGDKVKVKVLGVDQQSKRISLTMRLEEEQP 368 Score = 70.4 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 61/168 (36%), Gaps = 10/168 (5%) Query: 18 TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQGELEIQVGDEVDVALDA 74 R G +V GV+ D G+ + I + + E ++VG+ + Sbjct: 207 LRVGDVVEGVITGFAPFGAFADIGVGKDGLIHVSELAEGRVEKPEDAVKVGERYQFKILE 266 Query: 75 VEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFLPG 133 ++ LS +A R + L E + + G ++G G V++ G + Sbjct: 267 IDGEAARISLSLRRALRTQRMQQL----ETGQILEGTVSGIAPFGAFVDIGVGRDGLVHI 322 Query: 134 SLVDVRPVRDTLHLEGKELEFKV--IKLDQKRNNVVVSRRAVIESENS 179 S + V + + KV + +DQ+ + ++ R E S Sbjct: 323 SALAPHRVEKVEDVVKVGDKVKVKVLGVDQQSKRISLTMRLEEEQPAS 370 >UniRef50_C4G9K7 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4G9K7_9FIRM Length = 294 Score = 207 bits (528), Expect = 7e-52, Method: Composition-based stats. Identities = 81/271 (29%), Positives = 136/271 (50%), Gaps = 8/271 (2%) Query: 15 EIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQ---VGDEVDVA 71 I+ G IV V+ + V VD I E +G + G + Sbjct: 2 SIKYEVGDIVNCEVLGVSDHEVSVDLNAGKIGIIAFEDLSEEEGYDPHKHLRNGKHLTAQ 61 Query: 72 LDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFL 131 + +++DG G LS A+ +AW L+ A+ ET+T + +VKGG L G+RAF+ Sbjct: 62 ITSLDDGRGNIRLSVNAARHTDAWDQLKDAHSANETLTVHVREQVKGGVVAYLKGLRAFI 121 Query: 132 PGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQE 191 P S + V + G++LE K+ ++ + +V+S RAV + + E+ L+ L+ Sbjct: 122 PASQLAASYVDNLADFVGRDLEVKIDSIEPAKRRLVLSARAVEQEKKRLEQQAKLDALEV 181 Query: 192 GMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDR 250 G V+G V L D+GAFV++ G+DGL+HI+ ++ KRV+ + + VG ++ VK+ Sbjct: 182 GSIVEGTVARLKDFGAFVNIADGLDGLVHISQISLKRVEKVEDALRVGQKVRVKITGM-- 239 Query: 251 ERTRVSLGLK--QLGEDPWVAIAKRYPEGTK 279 + +VSL +K +L E P A R + + Sbjct: 240 KDGKVSLSMKAVELLERPSKEAAARKAQDEQ 270 Score = 158 bits (401), Expect = 4e-37, Method: Composition-based stats. Identities = 58/293 (19%), Positives = 126/293 (43%), Gaps = 12/293 (4%) Query: 270 IAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVE 329 ++ +Y G + V ++D+ V++ G G++ ++ + P K + G + Sbjct: 1 MSIKYEVGDIVNCEVLGVSDHEVSVDLNAGKIGIIAFEDLS-EEEGYDPHKHLRNGKHLT 59 Query: 330 VMVLDIDEERRRISLGLKQCK-ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGID 388 + +D+ R I L + + + W Q + H+ + + ++ G+ + G+ Sbjct: 60 AQITSLDDGRGNIRLSVNAARHTDAWDQLKDAHSANETLTVHVREQVKGGV-VAYLKGLR 118 Query: 389 GLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAED----PFNNW 444 + S ++ + A G ++ + ++ + R+ L + + ++ Sbjct: 119 AFIPASQLAASYVDNLADF---VGRDLEVKIDSIEPAKRRLVLSARAVEQEKKRLEQQAK 175 Query: 445 VALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAK 504 + + G+IV G V + GA V +ADG++G + S+ S RVE L VG +V K Sbjct: 176 LDALEVGSIVEGTVARLKDFGAFVNIADGLDGLVHISQISLKRVEKVEDALRVGQKVRVK 235 Query: 505 FTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAAKGE 557 TG+ K+ +SLS++A + + A K +D + A E+ + + Sbjct: 236 ITGM--KDGKVSLSMKAVELLERPSKEAAARKAQDEQVARYADRESTGTSLAD 286 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 63/300 (21%), Positives = 120/300 (40%), Gaps = 17/300 (5%) Query: 98 LEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRPVRDTLHLE--GKELEF 154 + YE + V + G +V+LN G + + D GK L Sbjct: 1 MSIKYEVGDIVNCEVLGVSDHEVSVDLNAGKIGIIAFEDLSEEEGYDPHKHLRNGKHLTA 60 Query: 155 KVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV 214 ++ LD R N+ +S A ++ DQL + + V+ G L G+ Sbjct: 61 QITSLDDGRGNIRLSVNAARHTDA---WDQLKDAHSANETLTVHVREQVKGGVVAYLKGL 117 Query: 215 DGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPW----VAI 270 + + +A V + ++ VG ++ VK+ + + R+ L + + ++ A Sbjct: 118 RAFIPASQLAASYVDNLADF--VGRDLEVKIDSIEPAKRRLVLSARAVEQEKKRLEQQAK 175 Query: 271 AKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEV 330 G+ + G V L D+G FV I +G++GLVH+S++ + + VG V V Sbjct: 176 LDALEVGSIVEGTVARLKDFGAFVNIADGLDGLVHISQISL-KRVEKVEDALRVGQKVRV 234 Query: 331 MVLDIDEERRRISLGLKQCK--ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGID 388 + + + ++SL +K + P ++ A + ++V + L GGI Sbjct: 235 KITGM--KDGKVSLSMKAVELLERPSKEAAARKAQDEQVARYADRESTGTSLADLLGGIK 292 Score = 50.3 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 35/88 (39%), Gaps = 5/88 (5%) Query: 9 FEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQGELEIQVG 65 E+ K GSIV G V + V+ + + Q + E ++VG Sbjct: 170 LEQQAKLDALEVGSIVEGTVARLKDFGAFVNIADGLDGLVHISQISLKRVEKVEDALRVG 229 Query: 66 DEVDVALDAVEDGFGETLLSREKAKRHE 93 +V V + ++D G+ LS + + E Sbjct: 230 QKVRVKITGMKD--GKVSLSMKAVELLE 255 >UniRef50_A0JMT9 LOC779090 protein (Fragment) n=5 Tax=Tetrapoda RepID=A0JMT9_XENLA Length = 1427 Score = 207 bits (528), Expect = 8e-52, Method: Composition-based stats. Identities = 95/549 (17%), Positives = 199/549 (36%), Gaps = 34/549 (6%) Query: 10 EESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVD 69 E++ PG + + + + + + + + F+ + + G EV Sbjct: 266 EQNWNLNNLLPGLVFKAQIEKVMHNNITLSFLSSYTGFVDFLHFE-PKKIGSYKEGQEVK 324 Query: 70 VALDAVEDGFGETLLSREKAKRH------EAWITLEKAYEDAETVTGVINGKVKGGFTVE 123 + ++ L+ + + + D V + G E Sbjct: 325 ACILWLDPSTKTIRLTLRQCFLQPGNTLPQLTSDWVGSVLDNCVVQTLFKNA---GAVFE 381 Query: 124 LNG-IRAFLPGSLVDVRPVRDTLHLE-GKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 L G F + + G + ++ ++S + + + Sbjct: 382 LEGGNLGFAFKHHLSASKQPHFEKFKKGTTHKGRITDFSPMDEMHILSLKEKVITNLFLR 441 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 E++Q G ++G VK + G V + + GL+ A +KHP + +G++ Sbjct: 442 H----EDIQPGQVLEGTVKCMEAVGMVVQITDHLTGLVPKLHFADVLLKHPEKKYIIGNK 497 Query: 241 ITVKVLKFDRERTRVSLGLKQLGED---PWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE 297 I KVL ++ L K+ P +A + G G + + DYGC V+ Sbjct: 498 IKCKVLTVVTCERKLILTRKRTLMKSTLPVLASYEDAQPGLITHGFIVAIKDYGCLVKFY 557 Query: 298 EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQ- 356 V+GL E+ + G V++V VL+ + + +++ L + + +Q Sbjct: 558 NEVQGLAPRRELGSLQEISSLEDAFYRGQVIKVQVLECNPQTQQLLLSFRITEEGHTEQE 617 Query: 357 -------FAETHNKGDRVEGKIKSITDFGIFI-GLDGGIDGLVHLSDISWNVAGEEAV-R 407 A + G V+ ++ S TD G+ + L + +S +V+ E + Sbjct: 618 QRFLKKIKAVKLDVGKLVDIRVLSKTDKGVNVLVLPEESPAFIPKMHLSDHVSNCELLWH 677 Query: 408 EYKKGDEIAAVVLQVDAERERI----SLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDA 463 ++GD+I + + I SL + + + ++ + G +TG V ++ Sbjct: 678 TLQEGDDIPGAMCLSSLKGHSILTKKSLLISSVEKGSCVKVISEVQTGMHLTGFVKSIMP 737 Query: 464 KGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKD 523 G VE G+ G + SE S V + G+ V A +D + + L+++ + Sbjct: 738 YGVFVEFPYGLFGLVPMSEISDKFVTNIRDHFVEGNTVVATVIKMDEEKKRFLLTLKMSE 797 Query: 524 EADEKDAIA 532 A + +I Sbjct: 798 CAPDDYSIE 806 Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats. Identities = 97/532 (18%), Positives = 187/532 (35%), Gaps = 36/532 (6%) Query: 45 ESAIPAEQFKNAQGELEIQVGDEVDVALDAVED---GFGETLLSREKAKRHEAWITLEKA 101 E+ +P + G V A+ ++E GF LS ++A T + Sbjct: 130 EALVPLSEL--------YSPGMLVRCAISSLETTASGFPSVKLSVNPKHVNKALNT--GS 179 Query: 102 YEDAETVTGVINGKVKGGFTVELN--GIRAFLPGS--LVDVRPVRDTLHL-EGKELEFKV 156 + ++G ++ G+ V++ G +AFLP + + L G+ L V Sbjct: 180 IKTGMVLSGCVSSVEDHGYLVDIGVAGTKAFLPRQKAQLFLSQAGQGSLLRVGEYLNCVV 239 Query: 157 IKLDQKRNNVVVS--RRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVD-LGG 213 ++ + V +S + V + + E++ L NL G+ K ++ + + L Sbjct: 240 EEVKNEGKIVRLSIIQNDVASALATVEQNWNLNNLLPGLVFKAQIEKVMHNNITLSFLSS 299 Query: 214 VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKR 273 G + D K G E+ +L D + L L+Q P + + Sbjct: 300 YTGFV---DFLHFEPKKIGS-YKEGQEVKACILWLDPSTKTIRLTLRQCFLQPGNTLPQL 355 Query: 274 YP--EGTKLTGRVTN--LTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVE 329 G+ L V + G E+E G G + + K H K G + Sbjct: 356 TSDWVGSVLDNCVVQTLFKNAGAVFELEGGNLGFAFKHHLSAS-KQPHFEK-FKKGTTHK 413 Query: 330 VMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDG 389 + D L LK+ E G +EG +K + G+ + + + G Sbjct: 414 GRITDFSPMDEMHILSLKEKVITNLFLRHEDIQPGQVLEGTVKCMEAVGMVVQITDHLTG 473 Query: 390 LVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQL---AEDPFNNWVA 446 LV + +V + ++Y G++I VL V ++ L K+ + P Sbjct: 474 LVPKLHFA-DVLLKHPEKKYIIGNKIKCKVLTVVTCERKLILTRKRTLMKSTLPVLASYE 532 Query: 447 LNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEA-SRDRVEDATLVLSVGDEVEAKF 505 + G I G + A+ G V+ + V+G E S + G ++ + Sbjct: 533 DAQPGLITHGFIVAIKDYGCLVKFYNEVQGLAPRRELGSLQEISSLEDAFYRGQVIKVQV 592 Query: 506 TGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAAKGE 557 + + + + LS R +E + + K + + + +K + Sbjct: 593 LECNPQTQQLLLSFRITEEGHTEQEQRFLKKIKAVKLDVGKLVDIRVLSKTD 644 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 100/612 (16%), Positives = 211/612 (34%), Gaps = 82/612 (13%) Query: 10 EESLKEIETRPGSIVRGVVVAIDKDV-VLVDAGLKSESAIPAEQFKNAQGELEIQVGDEV 68 E+ L G + VV +++ V AG S A + G+ + G +V Sbjct: 832 EDELSIYTLIAGQKLTLVVENAEENGPVQFSAGSIS-GAQTVSATQYHIGDKALVAGQKV 890 Query: 69 DVALDAVEDGFGETLLSREK--AKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNG 126 + V+ +S + K+ + + ++ V + Sbjct: 891 KAVVLHVDMLTLHVHVSLNQTLLKKKQNVPKMNSSHSADVQHVAEEFAVVS---LADSAH 947 Query: 127 IRAFLPGS--LVDVRPVRDTLHLEGKELEF--KVIKLDQKRNNVVVSRRAVIESENS--- 179 + A +P S L D G+ + K +++ + V +A ++ + Sbjct: 948 LIA-VPVSSHLNDTFRFESEKLKVGETISVILKTTTVNEHGLLLAVQNKAASKTSKNLGR 1006 Query: 180 ------AERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVK--H 230 R + L+ G V G VK++ V + V G +H++ + + + Sbjct: 1007 TTQSAMRVRGAISHGLKIGDLVTGTVKSIKPTQVTVSINDNVFGFIHVSQIMDETPQGCF 1066 Query: 231 PSEIVNVGDEITVKVLKF--------------DRERTRVSLGLKQLGED----PWVAIAK 272 P+ +N E+T +V+ D + L L + P K Sbjct: 1067 PTSKLNPKQEVTCRVIGGREVKTHRYLPITHPDFIHSVPELSLLPELINTDNVPKPRALK 1126 Query: 273 RYPEGTKLTGRVTNLTDYGCF--VEIEEGVEGLVHVSEMDWTNKNIH-PSKVVNVGDVVE 329 + G K+T V + VEI + G + + + T KN+ P K+ G + Sbjct: 1127 TFNPGDKVTCYVNKFNTETKYLEVEITPEIRGRIELLLLSQTPKNLKRPEKLFKNGQALS 1186 Query: 330 VMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDF-GIFIGLDGGID 388 V+ D + + L L + +G + + G+ + L G Sbjct: 1187 ATVVGPDAVHKHLCLSL---------TGIHSLEEGAVTVACVTKVVKGSGLTLSLPFGKT 1237 Query: 389 GLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAE-------DPF 441 G ++ + A E ++ ++ G + +L +++ ++SL ++ + D Sbjct: 1238 GNANMFHLCDKYA-EASLEKFTPGKFVRCAILS-NSKIVKVSLRQSRVNQQAQSSAVDED 1295 Query: 442 NNWVALNKKGAIVTGKVTAVD-AKGATVELADGVEGYLRASEASRDRVEDAT---LVLSV 497 + ++G +V+G V+A+ KG L+ + G+++ + V + + + Sbjct: 1296 IASIDSLEEGQLVSGFVSAITENKGVFFRLSSFIVGHIQFQNVTSYFVYEPSAYSNYIPE 1355 Query: 498 GDEVEAKFTGVDRKNRAISLSVRAKD--------------EADEKDAIATVNKQEDANFS 543 G + AK +D + + LS+ D + K + T K++ N Sbjct: 1356 GTLLTAKVLSIDPDKKHVELSLLPTDTGKPDVVPESAGFSKRKNKASKKTPTKRKRENLE 1415 Query: 544 NNAMAEAFKAAK 555 + K K Sbjct: 1416 KGSQDTGLKKKK 1427 Score = 93.1 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 73/395 (18%), Positives = 131/395 (33%), Gaps = 37/395 (9%) Query: 158 KLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDG 216 K+ +++ V + ++ E L L GM G VK D+ V L + G Sbjct: 46 KVSREKPKAVGLEKRTTSTKEIVE-IPLYSKLSVGMLFLGCVKRTKDFELTVSLPYCLTG 104 Query: 217 LLHITDMAWKRVKHPSEIVNVGDEIT--------------VKVLKFDRERTRVSLGLKQL 262 + T++ SE V D + V+ E T +L Sbjct: 105 YIQATNICDAYTNLISEQVEKDDPLEALVPLSELYSPGMLVRCAISSLETTASGFPSVKL 164 Query: 263 GEDPWVAIAK----RYPEGTKLTGRVTNLTDYGCFVEIE-EGVEGLVHVSEMDWTNKNIH 317 +P G L+G V+++ D+G V+I G + + + Sbjct: 165 SVNPKHVNKALNTGSIKTGMVLSGCVSSVEDHGYLVDIGVAGTKAFLPRQKAQLFLSQAG 224 Query: 318 PSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHN------KGDRVEGKI 371 ++ VG+ + +V ++ E + + L + Q E + G + +I Sbjct: 225 QGSLLRVGEYLNCVVEEVKNEGKIVRLSIIQNDVASALATVEQNWNLNNLLPGLVFKAQI 284 Query: 372 KSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISL 431 + + I + G V G YK+G E+ A +L +D + I L Sbjct: 285 EKVMHNNITLSFLSSYTGFVDFLHFEPKKIGS-----YKEGQEVKACILWLDPSTKTIRL 339 Query: 432 GVKQLAEDPFNNWVALNK--KGAIVTGKVTAV--DAKGATVELADGVEGYLRASEASRDR 487 ++Q P N L G+++ V GA EL G G+ S + Sbjct: 340 TLRQCFLQPGNTLPQLTSDWVGSVLDNCVVQTLFKNAGAVFELEGGNLGFAFKHHLSASK 399 Query: 488 VEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAK 522 G + + T + LS++ K Sbjct: 400 QPHFEK-FKKGTTHKGRITDFSPMDEMHILSLKEK 433 >UniRef50_A5GJG3 30S ribosomal protein S1 n=1 Tax=Synechococcus sp. WH 7803 RepID=A5GJG3_SYNPW Length = 403 Score = 207 bits (527), Expect = 9e-52, Method: Composition-based stats. Identities = 59/256 (23%), Positives = 116/256 (45%), Gaps = 12/256 (4%) Query: 21 GSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQGELEIQVGDEVDVALDAVED 77 G +V G V+ ++ D V VD G K+ +P + + G E++V + ++ Sbjct: 131 GDVVTGTVIGMESDGVYVDIGGKAPGFMPKSECGLGVITNLKERFPKGLEIEVLVTREQN 190 Query: 78 GFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVD 137 G +S ++W +++ ++ + ++G +GG T +L G+R F+P S + Sbjct: 191 ADGMVTISCRALALRQSWDKVKQLEKEGKVAQVKVSGFNRGGVTCDLEGLRGFIPRSQL- 249 Query: 138 VRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKG 197 + + L GK L ++++ + +V+S + + L+ G V+G Sbjct: 250 -QEGENHEALVGKTLGVAFLEVNPETRKLVLSEKKAATAAR-------FAELEVGQLVEG 301 Query: 198 IVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSL 257 V + YG F+DLGG+ GLLH + + ++ E+ + GD + + + D R R++L Sbjct: 302 HVAAVKPYGLFIDLGGISGLLHQSMITGGSLRSLREVFDQGDTVKALITELDPGRGRIAL 361 Query: 258 GLKQLGEDPWVAIAKR 273 L P + R Sbjct: 362 NTAMLEGQPGELLINR 377 Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats. Identities = 62/251 (24%), Positives = 108/251 (43%), Gaps = 13/251 (5%) Query: 192 GMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDR 250 G V G V + G +VD+GG G + ++ + + E G EI V V + Sbjct: 131 GDVVTGTVIGMESDGVYVDIGGKAPGFMPKSECGLGVITNLKERFPKGLEIEVLVTREQN 190 Query: 251 ERTRVSLGLKQL-GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEM 309 V++ + L W + + EG +V+ G ++E G+ G + S++ Sbjct: 191 ADGMVTISCRALALRQSWDKVKQLEKEGKVAQVKVSGFNRGGVTCDLE-GLRGFIPRSQL 249 Query: 310 DWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEG 369 + VG + V L+++ E R++ L K+ E G VEG Sbjct: 250 QEGENHEAL-----VGKTLGVAFLEVNPETRKLVLSEKKAATAARFAELE---VGQLVEG 301 Query: 370 KIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERI 429 + ++ +G+FI L GGI GL+H S I+ + + +GD + A++ ++D R RI Sbjct: 302 HVAAVKPYGLFIDL-GGISGLLHQSMITGG-SLRSLREVFDQGDTVKALITELDPGRGRI 359 Query: 430 SLGVKQLAEDP 440 +L L P Sbjct: 360 ALNTAMLEGQP 370 Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats. Identities = 52/242 (21%), Positives = 91/242 (37%), Gaps = 12/242 (4%) Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDID 336 G +TG V + G +V+I G + SE + + G +EV+V Sbjct: 131 GDVVTGTVIGMESDGVYVDIGGKAPGFMPKSECGLGV-ITNLKERFPKGLEIEVLVTREQ 189 Query: 337 EERRRISLGLKQ-CKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSD 395 +++ + W + + +G + K+ G+ L+ G+ G + S Sbjct: 190 NADGMVTISCRALALRQSWDKVKQLEKEGKVAQVKVSGFNRGGVTCDLE-GLRGFIPRSQ 248 Query: 396 ISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVT 455 + E G + L+V+ E ++ L K+ A A + G +V Sbjct: 249 LQEGENHEAL-----VGKTLGVAFLEVNPETRKLVLSEKKAAT---AARFAELEVGQLVE 300 Query: 456 GKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAI 515 G V AV G ++L G+ G L S + + V GD V+A T +D I Sbjct: 301 GHVAAVKPYGLFIDLG-GISGLLHQSMITGGSLRSLREVFDQGDTVKALITELDPGRGRI 359 Query: 516 SL 517 +L Sbjct: 360 AL 361 Score = 117 bits (294), Expect = 9e-25, Method: Composition-based stats. Identities = 60/266 (22%), Positives = 105/266 (39%), Gaps = 15/266 (5%) Query: 93 EAWITLEKAYEDAETVTGVINGKVKGGFTVELNG-IRAFLPGSLVDVRPVRDTLH--LEG 149 A E + VTG + G G V++ G F+P S + + + +G Sbjct: 119 AALDENEPVGTTGDVVTGTVIGMESDGVYVDIGGKAPGFMPKSECGLGVITNLKERFPKG 178 Query: 150 KELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFV 209 E+E V + V +S RA+ ++ + QL +EG + V G Sbjct: 179 LEIEVLVTREQNADGMVTISCRALALRQSWDKVKQLE---KEGKVAQVKVSGFNRGGVTC 235 Query: 210 DLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVA 269 DL G+ G + + + VG + V L+ + E ++ L K+ A Sbjct: 236 DLEGLRGFIPRSQLQEGENHEAL----VGKTLGVAFLEVNPETRKLVLSEKKAAT---AA 288 Query: 270 IAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVE 329 G + G V + YG F+++ G+ GL+H S M +V + GD V+ Sbjct: 289 RFAELEVGQLVEGHVAAVKPYGLFIDLG-GISGLLHQS-MITGGSLRSLREVFDQGDTVK 346 Query: 330 VMVLDIDEERRRISLGLKQCKANPWQ 355 ++ ++D R RI+L + P + Sbjct: 347 ALITELDPGRGRIALNTAMLEGQPGE 372 Score = 76.5 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 35/165 (21%), Positives = 68/165 (41%), Gaps = 7/165 (4%) Query: 364 GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVD 423 GD V G + + G+++ + G G + S+ + KG EI +V + Sbjct: 131 GDVVTGTVIGMESDGVYVDIGGKAPGFMPKSECGLG-VITNLKERFPKGLEIEVLVTREQ 189 Query: 424 AERERISLGVKQLA-EDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASE 482 +++ + LA ++ L K+G + KV+ + G T +L +G+ G++ S+ Sbjct: 190 NADGMVTISCRALALRQSWDKVKQLEKEGKVAQVKVSGFNRGGVTCDL-EGLRGFIPRSQ 248 Query: 483 ASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADE 527 +A VG + F V+ + R + LS + A Sbjct: 249 LQEGENHEAL----VGKTLGVAFLEVNPETRKLVLSEKKAATAAR 289 Score = 55.3 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 37/87 (42%) Query: 451 GAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDR 510 G +VTG V +++ G V++ G++ SE + + G E+E T Sbjct: 131 GDVVTGTVIGMESDGVYVDIGGKAPGFMPKSECGLGVITNLKERFPKGLEIEVLVTREQN 190 Query: 511 KNRAISLSVRAKDEADEKDAIATVNKQ 537 + +++S RA D + + K+ Sbjct: 191 ADGMVTISCRALALRQSWDKVKQLEKE 217 >UniRef50_A9B5U0 RNA binding S1 domain protein n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B5U0_HERA2 Length = 501 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 89/271 (32%), Positives = 143/271 (52%), Gaps = 22/271 (8%) Query: 184 QLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 + L +L GME+ G V + YG FVD+G G DGL+HI++M+ +R++ P+++V +GD + Sbjct: 97 RRLADLHAGMELDGKVTSTALYGVFVDIGVGRDGLVHISEMSDQRIESPTDVVQIGDIVK 156 Query: 243 VKVLKFDRERTRVSLGL--------KQLGEDPWVAIAK--RYPEGTKLTGRVTNLTDYGC 292 V+V D + R+SL + ++ + P V K G + G V + +G Sbjct: 157 VRVKSVDPDARRISLTMRSPRSEGRRRAPKRPEVNNDKLGELKPGDLVDGTVNGIAPFGV 216 Query: 293 FVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN 352 FV+I G +GLVH+SE+ N+ V VG VL++D +RISL L++ K + Sbjct: 217 FVDIGVGKDGLVHISELS-ENRVEKAEDAVTVGQSYTFRVLEVDTGAQRISLSLRRAKED 275 Query: 353 ---------PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGE 403 + + G ++GK+ I FG F+ L G DGLVH+S++S G+ Sbjct: 276 FQERPKAPRRREVNLDVIAPGTVLDGKVSGIAPFGAFVDLGVGRDGLVHISELSEGRVGK 335 Query: 404 EAVREYKKGDEIAAVVLQVDAERERISLGVK 434 K GD + VL+VD + +RISL ++ Sbjct: 336 VDDVV-KVGDPVKVRVLEVDPDSKRISLTMR 365 Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 95/289 (32%), Positives = 151/289 (52%), Gaps = 22/289 (7%) Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDID 336 G +L G+VT+ YG FV+I G +GLVH+SEM + P+ VV +GD+V+V V +D Sbjct: 105 GMELDGKVTSTALYGVFVDIGVGRDGLVHISEMS-DQRIESPTDVVQIGDIVKVRVKSVD 163 Query: 337 EERRRISLGLKQCKANPWQQFAET----------HNKGDRVEGKIKSITDFGIFIGLDGG 386 + RRISL ++ ++ ++ + GD V+G + I FG+F+ + G Sbjct: 164 PDARRISLTMRSPRSEGRRRAPKRPEVNNDKLGELKPGDLVDGTVNGIAPFGVFVDIGVG 223 Query: 387 IDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAED------- 439 DGLVH+S++S N E+A G VL+VD +RISL +++ ED Sbjct: 224 KDGLVHISELSENRV-EKAEDAVTVGQSYTFRVLEVDTGAQRISLSLRRAKEDFQERPKA 282 Query: 440 PFNNWV--ALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSV 497 P V + G ++ GKV+ + GA V+L G +G + SE S RV V+ V Sbjct: 283 PRRREVNLDVIAPGTVLDGKVSGIAPFGAFVDLGVGRDGLVHISELSEGRVGKVDDVVKV 342 Query: 498 GDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNA 546 GD V+ + VD ++ ISL++R +EA + + + D +++N A Sbjct: 343 GDPVKVRVLEVDPDSKRISLTMR-VEEAPTTPISTSGSSRLDRDWTNPA 390 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 70/266 (26%), Positives = 122/266 (45%), Gaps = 20/266 (7%) Query: 105 AETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRPVRDTLHLE--GKELEFKVIKLDQ 161 + G + G V++ G + S + + + + G ++ +V +D Sbjct: 105 GMELDGKVTSTALYGVFVDIGVGRDGLVHISEMSDQRIESPTDVVQIGDIVKVRVKSVDP 164 Query: 162 KRNNVVVSRRAVIES------ENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GV 214 + ++ R+ + + L L+ G V G V + +G FVD+G G Sbjct: 165 DARRISLTMRSPRSEGRRRAPKRPEVNNDKLGELKPGDLVDGTVNGIAPFGVFVDIGVGK 224 Query: 215 DGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRY 274 DGL+HI++++ RV+ + V VG T +VL+ D R+SL L++ ED Sbjct: 225 DGLVHISELSENRVEKAEDAVTVGQSYTFRVLEVDTGAQRISLSLRRAKEDFQERPKAPR 284 Query: 275 ---------PEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVG 325 GT L G+V+ + +G FV++ G +GLVH+SE+ V VG Sbjct: 285 RREVNLDVIAPGTVLDGKVSGIAPFGAFVDLGVGRDGLVHISELSEGRVGKVDDVV-KVG 343 Query: 326 DVVEVMVLDIDEERRRISLGLKQCKA 351 D V+V VL++D + +RISL ++ +A Sbjct: 344 DPVKVRVLEVDPDSKRISLTMRVEEA 369 Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats. Identities = 66/265 (24%), Positives = 115/265 (43%), Gaps = 21/265 (7%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE---IQVGDEVDVALD 73 + G + G V + V VD G+ + + + + + E +Q+GD V V + Sbjct: 101 DLHAGMELDGKVTSTALYGVFVDIGVGRDGLVHISEMSDQRIESPTDVVQIGDIVKVRVK 160 Query: 74 AVEDGFGETLLS---------REKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL 124 +V+ L+ R KR E + + V G +NG G V++ Sbjct: 161 SVDPDARRISLTMRSPRSEGRRRAPKRPEVNNDKLGELKPGDLVDGTVNGIAPFGVFVDI 220 Query: 125 N-GIRAFLPGSLVDVRPVRDTLH--LEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA- 180 G + S + V G+ F+V+++D + +S R E Sbjct: 221 GVGKDGLVHISELSENRVEKAEDAVTVGQSYTFRVLEVDTGAQRISLSLRRAKEDFQERP 280 Query: 181 ----ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIV 235 R+ L+ + G + G V + +GAFVDLG G DGL+HI++++ RV ++V Sbjct: 281 KAPRRREVNLDVIAPGTVLDGKVSGIAPFGAFVDLGVGRDGLVHISELSEGRVGKVDDVV 340 Query: 236 NVGDEITVKVLKFDRERTRVSLGLK 260 VGD + V+VL+ D + R+SL ++ Sbjct: 341 KVGDPVKVRVLEVDPDSKRISLTMR 365 Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats. Identities = 51/176 (28%), Positives = 83/176 (47%), Gaps = 11/176 (6%) Query: 360 THNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVV 419 + G ++GK+ S +G+F+ + G DGLVH+S++S + E + GD + V Sbjct: 101 DLHAGMELDGKVTSTALYGVFVDIGVGRDGLVHISEMS-DQRIESPTDVVQIGDIVKVRV 159 Query: 420 LQVDAERERISLGVKQL----------AEDPFNNWVALNKKGAIVTGKVTAVDAKGATVE 469 VD + RISL ++ + N+ + K G +V G V + G V+ Sbjct: 160 KSVDPDARRISLTMRSPRSEGRRRAPKRPEVNNDKLGELKPGDLVDGTVNGIAPFGVFVD 219 Query: 470 LADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEA 525 + G +G + SE S +RVE A ++VG + VD + ISLS+R E Sbjct: 220 IGVGKDGLVHISELSENRVEKAEDAVTVGQSYTFRVLEVDTGAQRISLSLRRAKED 275 Score = 81.2 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 2/107 (1%) Query: 445 VALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAK 504 +A G + GKVT+ G V++ G +G + SE S R+E T V+ +GD V+ + Sbjct: 99 LADLHAGMELDGKVTSTALYGVFVDIGVGRDGLVHISEMSDQRIESPTDVVQIGDIVKVR 158 Query: 505 FTGVDRKNRAISLSVRAKDEADEKDAIA--TVNKQEDANFSNNAMAE 549 VD R ISL++R+ + A VN + + + Sbjct: 159 VKSVDPDARRISLTMRSPRSEGRRRAPKRPEVNNDKLGELKPGDLVD 205 >UniRef50_C6JH83 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C6JH83_9FIRM Length = 302 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 87/267 (32%), Positives = 150/267 (56%), Gaps = 8/267 (2%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQG--- 58 + + E S K+IE G I+ G V+++D+ V+VD +E IPAE + G Sbjct: 5 MKDYETELEASFKKIE--EGDILTGTVISVDEKEVVVDLKYYAEGIIPAEDYSREPGFSL 62 Query: 59 ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 + ++ VGDEV + +DG G LLSR +A AW L++ + E + V+ G V G Sbjct: 63 KEQVNVGDEVSATVVRKDDGNGNILLSRTEAADVLAWDKLKELKDSKEVIDVVVKGIVNG 122 Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 G + G+R F+P S + + V DT K ++ +V +D+++ +++S + ++ + Sbjct: 123 GVIAYVEGVRGFIPASKLALNYVEDTNEYLNKPIQVQVFDIDKEKGRLILSAKEILREKA 182 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNV 237 ER + N+Q G+ +G+V++L YGAFVDLG G+ GL+HI+ + KR+K PSE++ V Sbjct: 183 EEERKTKISNVQVGLVTEGVVESLQPYGAFVDLGNGLSGLVHISQICEKRIKKPSEVLTV 242 Query: 238 GDEITVKVLKFDRERTRVSLGLKQLGE 264 GD++ V + ++SL +K+ + Sbjct: 243 GDKVK--VKVTAVKDGKLSLSIKEATD 267 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 70/299 (23%), Positives = 136/299 (45%), Gaps = 17/299 (5%) Query: 258 GLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIH 317 +K + A K+ EG LTG V ++ + V+++ EG++ + Sbjct: 4 SMKDYETE-LEASFKKIEEGDILTGTVISVDEKEVVVDLKYYAEGIIPAEDYS-REPGFS 61 Query: 318 PSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN-PWQQFAETHNKGDRVEGKIKSITD 376 + VNVGD V V+ D+ I L + W + E + + ++ +K I + Sbjct: 62 LKEQVNVGDEVSATVVRKDDGNGNILLSRTEAADVLAWDKLKELKDSKEVIDVVVKGIVN 121 Query: 377 FGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQL 436 G+ ++ G+ G + S ++ N + K I V +D E+ R+ L K++ Sbjct: 122 GGVIAYVE-GVRGFIPASKLALNYVEDTNEYLNKP---IQVQVFDIDKEKGRLILSAKEI 177 Query: 437 ----AEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDAT 492 AE+ ++ + G + G V ++ GA V+L +G+ G + S+ R++ + Sbjct: 178 LREKAEEERKTKISNVQVGLVTEGVVESLQPYGAFVDLGNGLSGLVHISQICEKRIKKPS 237 Query: 493 LVLSVGDEVEAKFTGVDRKNRAISLSVRAK----DEADEKDAIATVNKQEDANFSNNAM 547 VL+VGD+V+ K T K+ +SLS++ + E++ I + +E+A+ S A+ Sbjct: 238 EVLTVGDKVKVKVTA--VKDGKLSLSIKEATDMMAKEIEEEVIELPDSKEEASTSLGAL 294 >UniRef50_B8HSI0 RNA binding S1 domain protein n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HSI0_CYAP4 Length = 292 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 81/269 (30%), Positives = 120/269 (44%), Gaps = 14/269 (5%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEI 62 + F + E+ E G VRG VV +D D +D G KS + +PA + G+ Sbjct: 7 DDFLRALEQHGYSFEV--GQTVRGKVVNLDSDGAYIDIGGKSTAFLPAHEVLVPPGKKLA 64 Query: 63 QV---GDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGG 119 V + D + +D G+ LS ++ + W + E + + G KGG Sbjct: 65 DVLPLRSDRDFLIIRGQDAEGQISLSLKRLEIKALWERYQSLQESQGAIDVRVTGVNKGG 124 Query: 120 FTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 TV+ GIR F+P + V L G+ L +++ D +R +V S++ Sbjct: 125 LTVDAKGIRGFIPRTHVV--GAETLESLVGQTLTVTILEADPERKRLVCSQKI------- 175 Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGD 239 A R Q L+ G V+G V+++ YG +DL GV GLLHI D + KRV V VG Sbjct: 176 ARRQQRLQEFDYGQLVQGTVRDIRPYGLMIDLTGVLGLLHINDFSEKRVGSLQAHVQVGT 235 Query: 240 EITVKVLKFDRERTRVSLGLKQLGEDPWV 268 I V D ER R+SL + L P Sbjct: 236 PIKAIVTNLDAERGRISLSTRLLENRPGE 264 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 65/255 (25%), Positives = 114/255 (44%), Gaps = 13/255 (5%) Query: 188 NLQEGMEVKGIVKNLTDYGAFVDLGGVD-GLLHITDMAWKRVKHPSEIVNVGDEITVKVL 246 + + G V+G V NL GA++D+GG L ++ K ++++ + + ++ Sbjct: 19 SFEVGQTVRGKVVNLDSDGAYIDIGGKSTAFLPAHEVLVPPGKKLADVLPLRSDRDFLII 78 Query: 247 KFDRERTRVSLGLKQLGEDP-WVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVH 305 + ++SL LK+L W + RVT + G V+ +G+ G + Sbjct: 79 RGQDAEGQISLSLKRLEIKALWERYQSLQESQGAIDVRVTGVNKGGLTVD-AKGIRGFIP 137 Query: 306 VSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGD 365 + + VG + V +L+ D ER+R+ K + QQ + + G Sbjct: 138 RTHVVGAETLESL-----VGQTLTVTILEADPERKRLVCSQKIAR---RQQRLQEFDYGQ 189 Query: 366 RVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAE 425 V+G ++ I +G+ I L G+ GL+H++D S G + G I A+V +DAE Sbjct: 190 LVQGTVRDIRPYGLMIDLT-GVLGLLHINDFSEKRVG-SLQAHVQVGTPIKAIVTNLDAE 247 Query: 426 RERISLGVKQLAEDP 440 R RISL + L P Sbjct: 248 RGRISLSTRLLENRP 262 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 52/257 (20%), Positives = 103/257 (40%), Gaps = 12/257 (4%) Query: 268 VAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDV 327 + G + G+V NL G +++I + E+ + V+ + Sbjct: 14 EQHGYSFEVGQTVRGKVVNLDSDGAYIDIGGKSTAFLPAHEV-LVPPGKKLADVLPLRSD 72 Query: 328 VEVMVLDIDEERRRISLGLKQCKANP-WQQFAETHNKGDRVEGKIKSITDFGIFIGLDGG 386 + +++ + +ISL LK+ + W+++ ++ ++ + G+ + G Sbjct: 73 RDFLIIRGQDAEGQISLSLKRLEIKALWERYQSLQESQGAIDVRVTGVNKGGLTVD-AKG 131 Query: 387 IDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVA 446 I G + + +V G E + G + +L+ D ER+R+ K + Sbjct: 132 IRGFIPRT----HVVGAETLESL-VGQTLTVTILEADPERKRLVCSQKIARR---QQRLQ 183 Query: 447 LNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFT 506 G +V G V + G ++L GV G L ++ S RV + VG ++A T Sbjct: 184 EFDYGQLVQGTVRDIRPYGLMIDLT-GVLGLLHINDFSEKRVGSLQAHVQVGTPIKAIVT 242 Query: 507 GVDRKNRAISLSVRAKD 523 +D + ISLS R + Sbjct: 243 NLDAERGRISLSTRLLE 259 Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats. Identities = 60/275 (21%), Positives = 110/275 (40%), Gaps = 17/275 (6%) Query: 85 SREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNG-IRAFLPGSLVDVRPVRD 143 S A ++E +TV G + G +++ G AFLP V V P + Sbjct: 3 SFSHDDFLRALEQHGYSFEVGQTVRGKVVNLDSDGAYIDIGGKSTAFLPAHEVLVPPGKK 62 Query: 144 TLHLE--GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGM-EVKGIVK 200 + + +F +I+ + +S + + + ++LQE + V Sbjct: 63 LADVLPLRSDRDFLIIRGQDAEGQISLSLKRL----EIKALWERYQSLQESQGAIDVRVT 118 Query: 201 NLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLK 260 + G VD G+ G + T + VG +TV +L+ D ER R+ K Sbjct: 119 GVNKGGLTVDAKGIRGFIPRTHVVGAETLESL----VGQTLTVTILEADPERKRLVCSQK 174 Query: 261 QLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSK 320 + + G + G V ++ YG +++ GV GL+H+++ + Sbjct: 175 IARR---QQRLQEFDYGQLVQGTVRDIRPYGLMIDLT-GVLGLLHINDFS-EKRVGSLQA 229 Query: 321 VVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQ 355 V VG ++ +V ++D ER RISL + + P + Sbjct: 230 HVQVGTPIKAIVTNLDAERGRISLSTRLLENRPGE 264 Score = 49.2 bits (116), Expect = 4e-04, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 36/91 (39%) Query: 448 NKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTG 507 + G V GKV +D+ GA +++ +L A E + VL + + + Sbjct: 20 FEVGQTVRGKVVNLDSDGAYIDIGGKSTAFLPAHEVLVPPGKKLADVLPLRSDRDFLIIR 79 Query: 508 VDRKNRAISLSVRAKDEADEKDAIATVNKQE 538 ISLS++ + + ++ + + Sbjct: 80 GQDAEGQISLSLKRLEIKALWERYQSLQESQ 110 >UniRef50_B2KCI0 RNA binding S1 domain protein n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KCI0_ELUMP Length = 399 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 93/347 (26%), Positives = 176/347 (50%), Gaps = 12/347 (3%) Query: 4 SFAQLFEESLKEIE-TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEI 62 + QLF E + + IV+ VV + KD VLVD G K E IP + +G+ Sbjct: 27 TMDQLFAEQEELVNKLNKREIVQVTVVQVGKDSVLVDTGDKKEGYIPL---SDFEGKAVP 83 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 + G++V L +LS +KA+ + W +KA+++ E V G I VKGG+ V Sbjct: 84 EAGEKVSAVLVKKGSDERHAVLSFKKAQEYLGWEIAKKAFDNKERVRGTIVSCVKGGYIV 143 Query: 123 ELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 ++ G+ F+P SL ++ G +++ V++ +++N ++VSR+ V+E + + R Sbjct: 144 DVFGVSGFMPLSLSELHTAYKHYLPAGAKVKCVVVEFSKEKNKLIVSRKQVLEEDEAVRR 203 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 D +L ++EG ++ +V ++ G++G++ + ++AW+ + G + Sbjct: 204 DGVLAQVKEGEVLRVVVAKADKDKLYLRFHGIEGVVTLDNVAWQDTEKAITSFRRGQRLK 263 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE-EGVE 301 K+LK D+E ++ GLKQL +P A+ +++P + G++ +T+ G V + + Sbjct: 264 AKLLKIDKETGKLEFGLKQLFLNPADALRRKFPYKSTTKGKIVAITEEGVEVSLGKNNTK 323 Query: 302 GLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQ 348 G + EM NV DV+ VMV+ I+ + ++L +K+ Sbjct: 324 GFISQFEMGRDFDG-------NVDDVINVMVIGINPDDCSVNLSVKK 363 Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats. Identities = 79/409 (19%), Positives = 176/409 (43%), Gaps = 32/409 (7%) Query: 158 KLDQKRNNVVV---SRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV 214 K+D K+ + V + + + AE+++L+ L + V+ V + VD G Sbjct: 8 KIDSKQEAIQVEAAPEQEMTMDQLFAEQEELVNKLNKREIVQVTVVQVGKDSVLVDTGDK 67 Query: 215 -DGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGED-PWVAIAK 272 +G + ++D K V G++++ ++K + L K+ E W K Sbjct: 68 KEGYIPLSDFEGKAVP------EAGEKVSAVLVKKGSDERHAVLSFKKAQEYLGWEIAKK 121 Query: 273 RYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVS--EMDWTNKNIHPSKVVNVGDVVEV 330 + ++ G + + G V++ GV G + +S E+ K+ + G V+ Sbjct: 122 AFDNKERVRGTIVSCVKGGYIVDVF-GVSGFMPLSLSELHTAYKH-----YLPAGAKVKC 175 Query: 331 MVLDIDEERRRISLGLKQCKANPWQQFAE----THNKGDRVEGKIKSITDFGIFIGLDGG 386 +V++ +E+ ++ + KQ + +G+ + + +++ G Sbjct: 176 VVVEFSKEKNKLIVSRKQVLEEDEAVRRDGVLAQVKEGEVLRVVVAKADKDKLYLRF-HG 234 Query: 387 IDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVA 446 I+G+V L +++W E+A+ +++G + A +L++D E ++ G+KQL +P + Sbjct: 235 IEGVVTLDNVAWQDT-EKAITSFRRGQRLKAKLLKIDKETGKLEFGLKQLFLNPADALRR 293 Query: 447 LNKKGAIVTGKVTAVDAKGATVELA-DGVEGYLRASEASRDRVEDATLVLSVGDEVEAKF 505 + GK+ A+ +G V L + +G++ E RD + V D + Sbjct: 294 KFPYKSTTKGKIVAITEEGVEVSLGKNNTKGFISQFEMGRDFDGN------VDDVINVMV 347 Query: 506 TGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAA 554 G++ + +++LSV+ D+ K +A KQ + ++ + + Sbjct: 348 IGINPDDCSVNLSVKKYDQVQNKKFVAQYMKQAPRPTLGQLLQDSLEES 396 >UniRef50_A7SBJ3 Predicted protein n=2 Tax=Nematostella vectensis RepID=A7SBJ3_NEMVE Length = 1771 Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 97/563 (17%), Positives = 197/563 (34%), Gaps = 65/563 (11%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGL---------KSESAIPAEQFKNAQGELEIQVGDE 67 PG ++ G V +++ ++ G+ K + E G Sbjct: 213 NIVPGFVLPGCVSSVEDHGYVLSFGIPGKTGFLSKKKTGRVLVEGQYLNTIVESADTGRV 272 Query: 68 VDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGI 127 + V++D D ++S + R + + V ++ G V + Sbjct: 273 IRVSVDQ--DKIKSAMISSDMKVRFSSLLP-------GMLVNTRVSQCTSSGVIVSF--L 321 Query: 128 RAF--------LPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 F LP + + + K + +++ ++ K V +S I Sbjct: 322 ELFEGSVHILHLPENGGSGENLEKLYKKKSKHV-ARILYVNPKNKVVSLSMLDSIIQFKL 380 Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYG----AFVDLGGVDGLLHITDMAWKRVKHPSEIV 235 E+ G + D G A V G++G +H + ++ K+++ + Sbjct: 381 PS----FESCSIGDIFDNVTITRGDQGLGLLANVK-DGLNGFVHFSQVSDKQIEKLGKKY 435 Query: 236 NVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVE 295 G +VL + +SL K+ + + G+ + G + L +G V Sbjct: 436 KAGTSHKCRVLGMNTIDGLLSLTTKKSIINKPFMRYEDIKPGSIVEGTIITLEKFGMLVS 495 Query: 296 IEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQ 355 + + ++GLV + HP K + G VV+ VL +D +RR+ L K+ + Sbjct: 496 VSDHIKGLVTNMHLADI-ILKHPEKKLTEGKVVKCRVLTVDPGQRRLHLTHKKTMVSSTL 554 Query: 356 QFAETH---NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKG 412 Q + G G I S+ ++G + + GLV + E+ + G Sbjct: 555 QVITQYSDAKPGTTSHGFITSVREYGCLVTFYNNVKGLVPKDQLGIQ-ESEDPRGVFYLG 613 Query: 413 DEIAAVVLQVDAERERISLGVKQLAEDPFNNWVA----------------------LNKK 450 + V+ + +++++ L +K + + + V+ K Sbjct: 614 QVLTCHVISCNPDQQKLKLSLKANSANKSSTQVSLQTASTSLKNAAESKTMVTNFSDIKP 673 Query: 451 GAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDR 510 G ++ G V + G VE A G+ G S + V DA +G + A+ VD Sbjct: 674 GMVLPGFVKLLMGYGVFVEFAPGILGLAPNSFIANHFVSDAASHFKIGQTLVAQVNEVDA 733 Query: 511 KNRAISLSVRAKDEADEKDAIAT 533 + + +S++ D D + Sbjct: 734 ERQRFLVSLKQSDLNPGSDWTSA 756 Score = 184 bits (467), Expect = 9e-45, Method: Composition-based stats. Identities = 101/579 (17%), Positives = 199/579 (34%), Gaps = 45/579 (7%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLV-------------DAGLKSESAIPAEQFKNAQ 57 SL + G + G V + + +++ D K SA+ + Sbjct: 105 ASLSFKKLCEGMKLLGAVKEVGEFELIISLPNGLSGFVHILDINEKLMSALAKSSTEERI 164 Query: 58 GELEIQVGDEVDV---------ALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETV 108 + +GD V L + + G + LS + + + + Sbjct: 165 EDSIPSLGDLFTVNSLVVCVVKELLSSKHGHRKVKLSLRPEDVNAGVTNIVPGF----VL 220 Query: 109 TGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLE-GKELEFKVIKLDQKR-NNV 166 G ++ G+ + +PG + + L G+ L V D R V Sbjct: 221 PGCVSSVEDHGYVLSFG-----IPGKTGFLSKKKTGRVLVEGQYLNTIVESADTGRVIRV 275 Query: 167 VVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVD-LGGVDGLLHITDM-- 223 V + + + S++ +L GM V V T G V L +G +HI + Sbjct: 276 SVDQDKIKSAMISSDMKVRFSSLLPGMLVNTRVSQCTSSGVIVSFLELFEGSVHILHLPE 335 Query: 224 AWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGR 283 ++ ++ + ++L + + VSL + + + G Sbjct: 336 NGGSGENLEKLYKKKSKHVARILYVNPKNKVVSLSMLDSIIQFKLPSFESCSIGDIFDNV 395 Query: 284 VTNLTD--YGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRR 341 D G +++G+ G VH S++ + K G + VL ++ Sbjct: 396 TITRGDQGLGLLANVKDGLNGFVHFSQVS-DKQIEKLGKKYKAGTSHKCRVLGMNTIDGL 454 Query: 342 ISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVA 401 +SL K+ N E G VEG I ++ FG+ + + I GLV ++ ++ Sbjct: 455 LSLTTKKSIINKPFMRYEDIKPGSIVEGTIITLEKFGMLVSVSDHIKGLVTNMHLA-DII 513 Query: 402 GEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALN---KKGAIVTGKV 458 + ++ +G + VL VD + R+ L K+ + K G G + Sbjct: 514 LKHPEKKLTEGKVVKCRVLTVDPGQRRLHLTHKKTMVSSTLQVITQYSDAKPGTTSHGFI 573 Query: 459 TAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLS 518 T+V G V + V+G + + ED V +G + + + + LS Sbjct: 574 TSVREYGCLVTFYNNVKGLVPKDQLGIQESEDPRGVFYLGQVLTCHVISCNPDQQKLKLS 633 Query: 519 VRA--KDEADEKDAIATVNKQEDANFSNNAMAEAFKAAK 555 ++A +++ + ++ T + + M F K Sbjct: 634 LKANSANKSSTQVSLQTASTSLKNAAESKTMVTNFSDIK 672 Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats. Identities = 108/632 (17%), Positives = 222/632 (35%), Gaps = 110/632 (17%) Query: 13 LKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQGELEIQVGDEVD 69 ++ + +PGSIV G ++ ++K +LV + + + E ++ G V Sbjct: 469 MRYEDIKPGSIVEGTIITLEKFGMLVSVSDHIKGLVTNMHLADIILKHPEKKLTEGKVVK 528 Query: 70 VALDAVEDGFGETLLSREKAKRHEAWITLEKAYED--AETVTGVINGKVKGGFTVEL-NG 126 + V+ G L+ +K + + + T G I + G V N Sbjct: 529 CRVLTVDPGQRRLHLTHKKTMVSSTLQVITQYSDAKPGTTSHGFITSVREYGCLVTFYNN 588 Query: 127 IRAFLPGSLVDVRPVRDTL--HLEGKELEFKVIKLDQKRNNVVVSRRA------------ 172 ++ +P + ++ D G+ L VI + + + +S +A Sbjct: 589 VKGLVPKDQLGIQESEDPRGVFYLGQVLTCHVISCNPDQQKLKLSLKANSANKSSTQVSL 648 Query: 173 ------VIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAW 225 + + S +++ GM + G VK L YG FV+ G+ GL + +A Sbjct: 649 QTASTSLKNAAESKTMVTNFSDIKPGMVLPGFVKLLMGYGVFVEFAPGILGLAPNSFIAN 708 Query: 226 KRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRY----------- 274 V + +G + +V + D ER R + LKQ +P Sbjct: 709 HFVSDAASHFKIGQTLVAQVNEVDAERQRFLVSLKQSDLNPGSDWTSATAGALLEEILSE 768 Query: 275 ---------------------PEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTN 313 P G+ + G+V+ + G + + +G++G V ++ Sbjct: 769 RKHILDELASKTEDVKNLLSLPVGSCIEGKVSKVKKNGISLTLPDGLKGFV-FHQLAQGV 827 Query: 314 KNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQF---AETHNKGDRVEGK 370 + G+VV+ VLD+D ++ + L L Q + G V+ Sbjct: 828 SCLE-------GEVVQGCVLDLDVKKSVVELTLLPDVVKGRQNQKNKPKQMKPGQPVDFI 880 Query: 371 IKSITDFGIFIGLD------GGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDA 424 ++ I + + L G +HL+DI + + + G + +L+ + Sbjct: 881 VQLIKAEYMVVVLPCAAFKIGYAPAKMHLNDI------RDVAKRFNVGQKYRGSILE--S 932 Query: 425 ERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEAS 484 I + Q N+ K G + + +V ++ V+L + G + S A+ Sbjct: 933 SSHCIVVSECQ------NSSKENLKPGTVTSVEVRSIKPLQMNVQLG-QIHGRVHVSNAA 985 Query: 485 RDRV--EDATLVLSVGDEVEAKFTGV--------------DRKNRAISLSVRAKDEADEK 528 D + E +G +++AK G + LS++ + Sbjct: 986 DDLIQGESPFKPFQMGQKIQAKILGFRDTKTHNFLPLTHRNFTRAVAELSLKPSMVSKTS 1045 Query: 529 DAI---ATVNKQEDANFSNNAMAEAFKAAKGE 557 + A ++++ +F +AF + + Sbjct: 1046 ASEVVGAVYDEKKIEDFKIGDEVQAFVKSTSD 1077 Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 105/610 (17%), Positives = 201/610 (32%), Gaps = 98/610 (16%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEI 62 + A E+ + GS + G V + K+ + + + + F + Sbjct: 774 DELASKTEDVKNLLSLPVGSCIEGKVSKVKKNGISLTLPDGLKGFV----FHQLAQGVSC 829 Query: 63 QVGDEVDVALDAVEDGFGETLLSREK--AKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 G+ V + ++ L+ K + K + + V I +K + Sbjct: 830 LEGEVVQGCVLDLDVKKSVVELTLLPDVVKGRQNQKNKPKQMKPGQPVD-FIVQLIKAEY 888 Query: 121 TVELNGIRAF----LPG--SLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVI 174 V + AF P L D+R V + G++ +++ + +VV Sbjct: 889 MVVVLPCAAFKIGYAPAKMHLNDIRDVAKRFN-VGQKYRGSILE--SSSHCIVV------ 939 Query: 175 ESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRV--KHPS 232 S ++ ENL+ G V+++ V LG + G +H+++ A + + P Sbjct: 940 ----SECQNSSKENLKPGTVTSVEVRSIKPLQMNVQLGQIHGRVHVSNAADDLIQGESPF 995 Query: 233 EIVNVGDEITVKVLKF--------------DRERTRVSLGLKQLGEDPW----------- 267 + +G +I K+L F + R L LK Sbjct: 996 KPFQMGQKIQAKILGFRDTKTHNFLPLTHRNFTRAVAELSLKPSMVSKTSASEVVGAVYD 1055 Query: 268 VAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNI-HPSKVVNVGD 326 + + G ++ V + +D ++ I V G V + K + H S G+ Sbjct: 1056 EKKIEDFKIGDEVQAFVKSTSDNCIWMAINTLVSGRVELLHASNDVKVLRHLSSAFKPGN 1115 Query: 327 VVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITD-FGIFIGLDG 385 VLD+D++ ++L L + ++ V G++ + G+FI L Sbjct: 1116 GHTCTVLDVDKDHEVLNLSL-------TVKPDSQLSRDQIVPGRVTRVMPTSGLFIQLPL 1168 Query: 386 GIDGLVHLSDISWNVA---------------------GEEAVREYKKGDEIAAVVLQVDA 424 GLV L+DI+ + YK + +L Sbjct: 1169 HKSGLVALTDIADHFTENPTDGYKVKQIVRWLQSQADRTNPTDGYKVKQIVRCCILS-KK 1227 Query: 425 ERERISLGVK--------------QLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVEL 470 + L ++ + D +A G IV G V+ G V L Sbjct: 1228 DNGHYDLSLRPSRTTEATTQEEKDKSRTDREIGSLAALDVGDIVRGYVSCATNIGVFVSL 1287 Query: 471 ADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDA 530 ++ ++ S V++ + VG V K ++ N I LS++ +D A Sbjct: 1288 GRNIKARVQIKNLSHFYVKEWKPLFPVGKLVTGKVLSINPTNGQIELSLKGRDVGGPDPA 1347 Query: 531 IATVNKQEDA 540 +E Sbjct: 1348 PNPKQTEETG 1357 >UniRef50_C5RED5 RNA binding S1 domain protein n=1 Tax=Clostridium cellulovorans 743B RepID=C5RED5_CLOCL Length = 308 Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 82/269 (30%), Positives = 140/269 (52%), Gaps = 10/269 (3%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK---NAQG 58 + F + S+K I G +V G VV++ ++ VLV G + IP E+ + Sbjct: 7 MKDFMDQIDNSMKRI--VKGQMVEGEVVSVTEEDVLVSIGHMKDGIIPKEKATFDMSKSL 64 Query: 59 ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 + + +GD + ++ +DG G+ LLS+ K R +W L++ + E + VKG Sbjct: 65 KEQFNLGDIIKAYVEVEDDGEGKILLSKVKLDRESSWDELQRLHNTQEIFEVTVKEAVKG 124 Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 G T EL G+RAF+P S + + V D K L+ K+I+L++ V++S + V E Sbjct: 125 GATTELYGVRAFIPASQLSMSYVEDISAFVNKVLKVKLIELNKDNRRVILSAKEVERDEL 184 Query: 179 SAERDQLLENL----QEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSE 233 S + D L E++ + G V+ V L +GA V L GV+GL+H + ++ RV +P + Sbjct: 185 SKKMDNLWESIDDKYRVGDIVETKVVKLLKFGAIVKLEEGVEGLVHNSQISDDRVMNPGD 244 Query: 234 IVNVGDEITVKVLKFDRERTRVSLGLKQL 262 + G +I VK+L D+ + ++SL K+ Sbjct: 245 YLKEGQDIKVKILTIDKVQKKISLSYKEA 273 Score = 151 bits (382), Expect = 6e-35, Method: Composition-based stats. Identities = 66/306 (21%), Positives = 126/306 (41%), Gaps = 16/306 (5%) Query: 258 GLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIH 317 +K D KR +G + G V ++T+ V I +G++ E + + Sbjct: 6 SMKD-FMDQIDNSMKRIVKGQMVEGEVVSVTEEDVLVSIGHMKDGIIP-KEKATFDMSKS 63 Query: 318 PSKVVNVGDVVEVMVLDIDEERRRISLG-LKQCKANPWQQFAETHNKGDRVEGKIKSITD 376 + N+GD+++ V D+ +I L +K + + W + HN + E +K Sbjct: 64 LKEQFNLGDIIKAYVEVEDDGEGKILLSKVKLDRESSWDELQRLHNTQEIFEVTVKEAVK 123 Query: 377 FGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQL 436 G L G+ + S +S + + + K + +++++ + R+ L K++ Sbjct: 124 GGATTEL-YGVRAFIPASQLSMSYVEDISAFVNKV---LKVKLIELNKDNRRVILSAKEV 179 Query: 437 AEDP--------FNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRV 488 D + + + G IV KV + GA V+L +GVEG + S+ S DRV Sbjct: 180 ERDELSKKMDNLWESIDDKYRVGDIVETKVVKLLKFGAIVKLEEGVEGLVHNSQISDDRV 239 Query: 489 EDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQED-ANFSNNAM 547 + L G +++ K +D+ + ISLS + ++ K ED + Sbjct: 240 MNPGDYLKEGQDIKVKILTIDKVQKKISLSYKEAVAKEQSTEFRKYAKNEDFGTTLGDMF 299 Query: 548 AEAFKA 553 + FK Sbjct: 300 GDKFKD 305 Score = 124 bits (312), Expect = 8e-27, Method: Composition-based stats. Identities = 61/273 (22%), Positives = 121/273 (44%), Gaps = 17/273 (6%) Query: 104 DAETVTGVINGKVKGGFTVELNGIR-AFLPGSLV--DVRPVRDTLHLEGKELEFKVIKLD 160 + V G + + V + ++ +P D+ G ++ V +++ Sbjct: 23 KGQMVEGEVVSVTEEDVLVSIGHMKDGIIPKEKATFDMSKSLKEQFNLGDIIKAYV-EVE 81 Query: 161 QKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHI 220 ++ + ++ E+S + Q L N QE + VK GA +L GV + Sbjct: 82 DDGEGKILLSKVKLDRESSWDELQRLHNTQE--IFEVTVKEAVKGGATTELYGVRAFIPA 139 Query: 221 TDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDP--------WVAIAK 272 + ++ V+ S V + VK+++ +++ RV L K++ D W +I Sbjct: 140 SQLSMSYVEDISAF--VNKVLKVKLIELNKDNRRVILSAKEVERDELSKKMDNLWESIDD 197 Query: 273 RYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMV 332 +Y G + +V L +G V++EEGVEGLVH S++ ++ ++P + G ++V + Sbjct: 198 KYRVGDIVETKVVKLLKFGAIVKLEEGVEGLVHNSQIS-DDRVMNPGDYLKEGQDIKVKI 256 Query: 333 LDIDEERRRISLGLKQCKANPWQQFAETHNKGD 365 L ID+ +++ISL K+ A + K + Sbjct: 257 LTIDKVQKKISLSYKEAVAKEQSTEFRKYAKNE 289 Score = 61.5 bits (148), Expect = 9e-08, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 67/165 (40%), Gaps = 11/165 (6%) Query: 42 LKSESAIPAEQFK-NAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEA------ 94 + IPA Q + ++ V + V L + +LS ++ +R E Sbjct: 131 YGVRAFIPASQLSMSYVEDISAFVNKVLKVKLIELNKDNRRVILSAKEVERDELSKKMDN 190 Query: 95 -WITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRPVRDTLHLE--GK 150 W +++ Y + V + +K G V+L G+ + S + V + G+ Sbjct: 191 LWESIDDKYRVGDIVETKVVKLLKFGAIVKLEEGVEGLVHNSQISDDRVMNPGDYLKEGQ 250 Query: 151 ELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEV 195 +++ K++ +D+ + + +S + + E S E + +N G + Sbjct: 251 DIKVKILTIDKVQKKISLSYKEAVAKEQSTEFRKYAKNEDFGTTL 295 >UniRef50_B3SB29 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3SB29_TRIAD Length = 927 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 102/544 (18%), Positives = 205/544 (37%), Gaps = 53/544 (9%) Query: 18 TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE---------------- 61 + G V G+V I+ + V I Q + +L Sbjct: 77 YKKGVSVLGIVKEINPVDITVSLPGLLTGYIHITQMSSQMTQLLTRQLKSTELDGEDGVT 136 Query: 62 -------IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKA------YEDAETV 108 ++GD + +D VE S+ K + + A + T+ Sbjct: 137 QLDLNSFFRIGDMLRCVVDEVE-----LTKSKHKRIKLAIDPKILNAKFKANRIQTGMTL 191 Query: 109 TGVINGKVKGGFTV--ELNGIRAFLPGSL-VDVRPVRDTLHL-EGKELEFKVIKLDQKRN 164 +G I G+ V E+ + FL +D R+ L G + + K+ + Sbjct: 192 SGYIESVEDHGYIVSFEIENLVGFLSQQEGLDYAKSRELEDLPVGLPVNCVIQKVKDQGR 251 Query: 165 NVVV--SRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVD-LGGVDGLLHIT 221 V V S V++++ + LQ G+ V G + ++ GA + LGG G + Sbjct: 252 MVTVGVSSSKVLKAKAHEGMRFSYDTLQAGLYVNGTIAKISTKGAQLSFLGGFRGSVTAD 311 Query: 222 DMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLT 281 + + ++ + ++ +++ DR+ +++L L + + + I++ Sbjct: 312 HL------NQNQSLQERSKVVARIIYVDRKSKKIALSLLNITVNGQMDISQVEIGQIIED 365 Query: 282 GRVTNLTDY-GCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERR 340 V + G +++ + ++G VH+S + + K G V+ Sbjct: 366 AVVLRVDKGVGLLLQLGDNLKGYVHISRASDKHID-KFGKQHRAGSKHRCRVIANSLIDE 424 Query: 341 RISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNV 400 + ++Q + G V GKI S+ DFGI + + I L +S ++ Sbjct: 425 LAIITMQQSVLEQQFISYKDIKPGTLVMGKIISLEDFGILVQVTDHIKALCPRLHMS-DI 483 Query: 401 AGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAI---VTGK 457 + +++K+G++I VL VDA R R+ L K+ + + ++ G Sbjct: 484 TLKHPEKKFKEGNKIKCRVLTVDARRRRLILTHKKSMVHSSHVVITSYEEAQENVTAHGF 543 Query: 458 VTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISL 517 +++V + G + + V G++ S +E+ V VG V VD N+ +SL Sbjct: 544 ISSVRSNGCFITFYNNVRGFVHKKYLSTQYIENPETVFFVGQVVLTYIVSVDAVNKKLSL 603 Query: 518 SVRA 521 S++ Sbjct: 604 SLKP 607 Score = 171 bits (434), Expect = 6e-41, Method: Composition-based stats. Identities = 86/498 (17%), Positives = 188/498 (37%), Gaps = 28/498 (5%) Query: 7 QLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAG-LKSESAIPAEQFKN---AQGELEI 62 ++ K + G + G + +++ +V + ++ + ++ ++ Sbjct: 174 KILNAKFKANRIQTGMTLSGYIESVEDHGYIVSFEIENLVGFLSQQEGLDYAKSRELEDL 233 Query: 63 QVGDEVDVALDAVEDGFGETLL--SREKAKRHEAWITLEKAYED---AETVTGVING-KV 116 VG V+ + V+D + S K + +A + +Y+ V G I Sbjct: 234 PVGLPVNCVIQKVKDQGRMVTVGVSSSKVLKAKAHEGMRFSYDTLQAGLYVNGTIAKIST 293 Query: 117 KGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIES 176 KG L G R S+ ++ E ++ ++I +D+K + + +++ Sbjct: 294 KGAQLSFLGGFRG----SVTADHLNQNQSLQERSKVVARIIYVDRKSKKIAL---SLLNI 346 Query: 177 ENSAERDQLLENLQEGMEVK-GIVKNLTD-YGAFVDLG-GVDGLLHITDMAWKRVKHPSE 233 + + D + ++ G ++ +V + G + LG + G +HI+ + K + + Sbjct: 347 TVNGQMD--ISQVEIGQIIEDAVVLRVDKGVGLLLQLGDNLKGYVHISRASDKHIDKFGK 404 Query: 234 IVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCF 293 G + +V+ + ++Q + K GT + G++ +L D+G Sbjct: 405 QHRAGSKHRCRVIANSLIDELAIITMQQSVLEQQFISYKDIKPGTLVMGKIISLEDFGIL 464 Query: 294 VEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP 353 V++ + ++ L M HP K G+ ++ VL +D RRR+ L K+ + Sbjct: 465 VQVTDHIKALCPRLHMSDIT-LKHPEKKFKEGNKIKCRVLTVDARRRRLILTHKKSMVHS 523 Query: 354 WQQFAETHNKGDRV---EGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYK 410 ++ + G I S+ G FI + G VH +S E + Sbjct: 524 SHVVITSYEEAQENVTAHGFISSVRSNGCFITFYNNVRGFVHKKYLSTQYI-ENPETVFF 582 Query: 411 KGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVEL 470 G + ++ VDA +++SL +K A + + +V + A+G V + Sbjct: 583 VGQVVLTYIVSVDAVNKKLSLSLKPPALTTSTSSNLKFNQSKVVDVDLFRATAEGLDVLM 642 Query: 471 AD-GVEGYLRASEASRDR 487 G+ + S Sbjct: 643 QPSGLAASVPVHHLSDFH 660 Score = 135 bits (339), Expect = 6e-30, Method: Composition-based stats. Identities = 65/472 (13%), Positives = 171/472 (36%), Gaps = 44/472 (9%) Query: 101 AYEDAETVTGVINGKVKGGFTVELNGI-RAFLPGSLVDVRPVR----------------- 142 Y+ +V G++ TV L G+ ++ + + + + Sbjct: 76 MYKKGVSVLGIVKEINPVDITVSLPGLLTGYIHITQMSSQMTQLLTRQLKSTELDGEDGV 135 Query: 143 -----DTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKG 197 ++ G L V +++ ++ R + +Q GM + G Sbjct: 136 TQLDLNSFFRIGDMLRCVVDEVELTKSK--HKRIKLAIDPKILNAKFKANRIQTGMTLSG 193 Query: 198 IVKNLTDYGAFV--DLGGVDGLLHITD-MAWKRVKHPSEIVNVGDEITVKVLKFDRERTR 254 ++++ D+G V ++ + G L + + + + + + + VG + + K + Sbjct: 194 YIESVEDHGYIVSFEIENLVGFLSQQEGLDYAKSRELED-LPVGLPVNCVIQKVKDQGRM 252 Query: 255 VSLG------LKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSE 308 V++G LK + G + G + ++ G + G G Sbjct: 253 VTVGVSSSKVLKAKAHEGMRFSYDTLQAGLYVNGTIAKISTKGAQLSFLGGFRG------ 306 Query: 309 MDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVE 368 T +++ ++ + V ++ +D + ++I+L L N ++ + Sbjct: 307 -SVTADHLNQNQSLQERSKVVARIIYVDRKSKKIALSLLNITVNGQMDISQVEIGQIIED 365 Query: 369 GKIKSITDF-GIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERE 427 + + G+ + L + G VH+S S + ++ ++++ G + V+ E Sbjct: 366 AVVLRVDKGVGLLLQLGDNLKGYVHISRAS-DKHIDKFGKQHRAGSKHRCRVIANSLIDE 424 Query: 428 RISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDR 487 + ++Q + K G +V GK+ +++ G V++ D ++ S Sbjct: 425 LAIITMQQSVLEQQFISYKDIKPGTLVMGKIISLEDFGILVQVTDHIKALCPRLHMSDIT 484 Query: 488 VEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQED 539 ++ G++++ + VD + R + L+ + I + + ++ Sbjct: 485 LKHPEKKFKEGNKIKCRVLTVDARRRRLILTHKKSMVHSSHVVITSYEEAQE 536 >UniRef50_C3XPK3 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3XPK3_BRAFL Length = 1638 Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats. Identities = 108/558 (19%), Positives = 201/558 (36%), Gaps = 41/558 (7%) Query: 20 PGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGF 79 PG++V V ++ +L + L ++ + E + G V + + Sbjct: 198 PGTLVEATVTSVQNHGILAEF-LGFTGSVSRVHLPTKRAE-PYRKGQRVKACILYIHPTT 255 Query: 80 GETLLSREKAKRHEAWITLEKAYEDAETVTGVINGK-----VKGGFTVELN---GIRAFL 131 LS + W G + K V G V + F Sbjct: 256 KTVGLS----FQSRLWDGRTLVDVQELPAIGTVYKKAPVVHVWSGIGVTMKLSAETPGFA 311 Query: 132 PGSLVDVRPVR--DTLHLEGKELEFKVIKLDQ-KRNNVVVSRRAVIESENSAERDQLLEN 188 S + +PV + G + +VI +V +++VIE L++ Sbjct: 312 AVSQLSDQPVESIENTFKPGTQHSCRVINCSPLDGQAIVSLKKSVIEQPFLR-----LQD 366 Query: 189 LQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLK 247 L+ G V+G + ++ YG V L V G++ +A +K+P++ N GD I +VL Sbjct: 367 LKPGQVVEGKITSVQSYGITVSLSNYVRGVVSKIHLADIILKNPAKKFNEGDMIKCRVLN 426 Query: 248 FDRERTRVSLGLKQ---LGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLV 304 +++L K+ + P +A + GT G V ++ D+GC V V+GL+ Sbjct: 427 VATAGRQLALTHKRTLLTSKLPIMASYQAAKPGTWAHGFVLSVQDFGCIVMFYNNVKGLL 486 Query: 305 HVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKG 364 EM + P K+ G VV+ V+ + ++++ LK A G Sbjct: 487 PKREMTQEAQE-DPRKMFYKGQVVKCRVMSCNPALEKLTVSLKP--EKSGTPVAADFEVG 543 Query: 365 DRVEGKIKSITDFGIFIGLDG-GIDGLVHLSDISWNVAGEE-AVREYKKGDEIAAVVLQV 422 V ++ + + + + G G + + +S + + Y GD I + Sbjct: 544 KMVNVEVTEVKPDSLGVKVQGSDTPGFLPMMHLSDHQENCSLLLSRYSVGDVIQDAMYCC 603 Query: 423 DAERE-----RISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGY 477 + SL K + + + ++ G V V G VE G G Sbjct: 604 SRATGSMVTLKPSLK-KAVTSGQVVETFSDLRTDRVLRGWVRTVKPFGVFVEFPGGWVGL 662 Query: 478 LRASEASRDRVED--ATLVLSVGDEVEAKFTGVDRKNRAISLSVRA--KDEADEKDAIAT 533 ++ + + L+VGD + +D N +S+R+ ++A E I Sbjct: 663 APKADLTAVASKTHCQGTNLNVGDSTSVRILHLDIPNNIAEVSLRSDLLEQATEGKKIKM 722 Query: 534 VNKQEDANFSNNAMAEAF 551 E + +A A+ Sbjct: 723 KKGGEFSCTVLDAKAKYL 740 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 69/366 (18%), Positives = 139/366 (37%), Gaps = 13/366 (3%) Query: 165 NVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMA 224 N+ VS + ++ + D L+ L G V+ V ++ ++G + G G + + Sbjct: 172 NLTVSPTLLQKAVAKEDLDLTLDTLTPGTLVEATVTSVQNHGILAEFLGFTGSVSRVHLP 231 Query: 225 WKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGED--PWVAIAKRYPEGTKLT- 281 KR +E G + +L V L + D V + + GT Sbjct: 232 TKR----AEPYRKGQRVKACILYIHPTTKTVGLSFQSRLWDGRTLVDVQELPAIGTVYKK 287 Query: 282 GRVTNL-TDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERR 340 V ++ + G +++ G VS++ G V++ Sbjct: 288 APVVHVWSGIGVTMKLSAETPGFAAVSQLS-DQPVESIENTFKPGTQHSCRVINCSPLDG 346 Query: 341 RISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNV 400 + + LK+ + G VEGKI S+ +GI + L + G+V ++ ++ Sbjct: 347 QAIVSLKKSVIEQPFLRLQDLKPGQVVEGKITSVQSYGITVSLSNYVRGVVSKIHLA-DI 405 Query: 401 AGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQL---AEDPFNNWVALNKKGAIVTGK 457 + +++ +GD I VL V +++L K+ ++ P K G G Sbjct: 406 ILKNPAKKFNEGDMIKCRVLNVATAGRQLALTHKRTLLTSKLPIMASYQAAKPGTWAHGF 465 Query: 458 VTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISL 517 V +V G V + V+G L E +++ ED + G V+ + + +++ Sbjct: 466 VLSVQDFGCIVMFYNNVKGLLPKREMTQEAQEDPRKMFYKGQVVKCRVMSCNPALEKLTV 525 Query: 518 SVRAKD 523 S++ + Sbjct: 526 SLKPEK 531 Score = 154 bits (389), Expect = 8e-36, Method: Composition-based stats. Identities = 89/565 (15%), Positives = 203/565 (35%), Gaps = 45/565 (7%) Query: 25 RGVVVAIDKD-VVLVDAGLKSESAIPAEQFKN---AQGELEIQVGDEVDVALDAVEDGFG 80 + VV + V + ++ Q + E + G + + G Sbjct: 287 KAPVVHVWSGIGVTMKLSAETPGFAAVSQLSDQPVESIENTFKPGTQHSCRVINCSPLDG 346 Query: 81 ETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNG-IRAFLPGSLVDVR 139 + ++S +K+ + ++ L+ + + V G I G TV L+ +R + + Sbjct: 347 QAIVSLKKSVIEQPFLRLQD-LKPGQVVEGKITSVQSYGITVSLSNYVRGVVSKIHLADI 405 Query: 140 PVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKG 197 +++ EG ++ +V+ + + ++ + + + + + + G G Sbjct: 406 ILKNPAKKFNEGDMIKCRVLNVATAGRQLALTHKRTLLT-SKLPIMASYQAAKPGTWAHG 464 Query: 198 IVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVS 256 V ++ D+G V V GLL +M + + P ++ G + +V+ + +++ Sbjct: 465 FVLSVQDFGCIVMFYNNVKGLLPKREMTQEAQEDPRKMFYKGQVVKCRVMSCNPALEKLT 524 Query: 257 LGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI-EEGVEGLVHVSEMDWTNKN 315 + LK E +A + G + VT + V++ G + + + +N Sbjct: 525 VSLKP--EKSGTPVAADFEVGKMVNVEVTEVKPDSLGVKVQGSDTPGFLPMMHLSDHQEN 582 Query: 316 IHPS-KVVNVGDVVEVMVLDIDEERR-RISL--GLKQCKANPWQQFAETHNKGDRV-EGK 370 +VGDV++ + ++L LK+ + + + DRV G Sbjct: 583 CSLLLSRYSVGDVIQDAMYCCSRATGSMVTLKPSLKKAVTSGQVVETFSDLRTDRVLRGW 642 Query: 371 IKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAV-REYKKGDEIAAVVLQVDAERERI 429 ++++ FG+F+ GG GL +D++ + GD + +L +D Sbjct: 643 VRTVKPFGVFVEFPGGWVGLAPKADLTAVASKTHCQGTNLNVGDSTSVRILHLDIPNNIA 702 Query: 430 SLGVK-QLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELAD-GVEGYL----RASEA 483 + ++ L E KKG + V AK V + G Y+ + Sbjct: 703 EVSLRSDLLEQATEGKKIKMKKGGEFSCTVLDAKAKYLLVGINGSGALAYVTRKWHPNHG 762 Query: 484 SRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISL----------------SVRAKDEADE 527 S + DA +G+ + + + + I++ + + ++E + Sbjct: 763 SNVGMGDA----QIGETSKVRVVRITQSGSVIAMPAGKKTEGKKEGAEHKAAKRREEKNR 818 Query: 528 KDAIATVNKQEDANFSNNAMAEAFK 552 K +E+ AE + Sbjct: 819 KRKRDESETREETEADGQNPAEQLQ 843 Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats. Identities = 95/567 (16%), Positives = 176/567 (31%), Gaps = 67/567 (11%) Query: 13 LKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQGELEIQVGDEVD 69 L+ + +PG +V G + ++ + V + + + GD + Sbjct: 362 LRLQDLKPGQVVEGKITSVQSYGITVSLSNYVRGVVSKIHLADIILKNPAKKFNEGDMIK 421 Query: 70 VALDAVEDGFGETLLSREK--AKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL-NG 126 + V + L+ ++ + +A + G + G V N Sbjct: 422 CRVLNVATAGRQLALTHKRTLLTSKLPIMASYQAAKPGTWAHGFVLSVQDFGCIVMFYNN 481 Query: 127 IRAFLPGSLVDVRPVRDTLH--LEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQ 184 ++ LP + D +G+ ++ +V+ + + VS + Sbjct: 482 VKGLLPKREMTQEAQEDPRKMFYKGQVVKCRVMSCNPALEKLTVSLKP------EKSGTP 535 Query: 185 LLENLQEGMEVKGIVKNLTDYGAFVDLGGVD--GLLHITDMAWKRVKH--PSEIVNVGDE 240 + + + G V V + V + G D G L + ++ + +VGD Sbjct: 536 VAADFEVGKMVNVEVTEVKPDSLGVKVQGSDTPGFLPMMHLSDHQENCSLLLSRYSVGDV 595 Query: 241 ITVKVLKFDRERT-----RVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVE 295 I + R + SL K + V L G V + +G FVE Sbjct: 596 IQDAMYCCSRATGSMVTLKPSLK-KAVTSGQVVETFSDLRTDRVLRGWVRTVKPFGVFVE 654 Query: 296 IEEGVEGLVHVSEMDWTNKNIH-PSKVVNVGDVVEVMVLDIDEERRRISLGLK-QCKANP 353 G GL +++ H +NVGD V +L +D + L+ Sbjct: 655 FPGGWVGLAPKADLTAVASKTHCQGTNLNVGDSTSVRILHLDIPNNIAEVSLRSDLLEQA 714 Query: 354 WQQFAETHNKGDRVEGKIKSITDFGIFIGLDG-GIDGLV-------HLSDISWNVAGEEA 405 + KG + + +G++G G V H S++ A Sbjct: 715 TEGKKIKMKKGGEFSCTVLDAKAKYLLVGINGSGALAYVTRKWHPNHGSNVGMGDAQIGE 774 Query: 406 VREY-----------------------KKGDEIAAVV--LQVDAERERISLGVKQLAEDP 440 + K+G E A + + +R+R ++ E Sbjct: 775 TSKVRVVRITQSGSVIAMPAGKKTEGKKEGAEHKAAKRREEKNRKRKRDESETREETEAD 834 Query: 441 FNNWVALNKKGAIVTGKVTAVDAKGATVELAD---GVEGYLRASEASRD--RVEDATLVL 495 N + GAIV V A V++ EG + SE D E L Sbjct: 835 GQNPAEQLQLGAIVNVVVVATARDHLEVKITGQGHRQEGIVHISEVKDDVREGEAPMAKL 894 Query: 496 SVGDEVEAKFTGVDRKNRAISLSVRAK 522 VG V + G+ K S+++ Sbjct: 895 LVGSIVPGRVIGISHKKVK---SLKSL 918 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 95/592 (16%), Positives = 187/592 (31%), Gaps = 97/592 (16%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE-----IQVGDEVDVA 71 + R ++RG V + V V+ P + + VGD V Sbjct: 632 DLRTDRVLRGWVRTVKPFGVFVEFPGGWVGLAPKADLTAVASKTHCQGTNLNVGDSTSVR 691 Query: 72 LDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFL 131 + ++ +S +A + + + + V +NG A Sbjct: 692 ILHLDIPNNIAEVSLRSDLLEQATEGKKIKMKKGGEFSCTVLDAKAKYLLVGINGSGALA 751 Query: 132 -------PGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVS-------RRAVIESE 177 P +V G+ + +V+++ Q + + + ++ E + Sbjct: 752 YVTRKWHPNHGSNVGMG---DAQIGETSKVRVVRITQSGSVIAMPAGKKTEGKKEGAEHK 808 Query: 178 NSAERDQLL----------------------ENLQEGMEVKGIVKNLTDYGAFVDLGGV- 214 + R++ E LQ G V +V V + G Sbjct: 809 AAKRREEKNRKRKRDESETREETEADGQNPAEQLQLGAIVNVVVVATARDHLEVKITGQG 868 Query: 215 ---DGLLHITDMAWK--RVKHPSEIVNVGDEITVKVLKFDRERTR--------------- 254 +G++HI+++ + P + VG + +V+ ++ + Sbjct: 869 HRQEGIVHISEVKDDVREGEAPMAKLLVGSIVPGRVIGISHKKVKSLKSLPFSRPGFEEV 928 Query: 255 -VSLGLKQLGEDPWVAIAKRYPEGTKLTGRV-----------TNLTDYGCFVEIEEGVEG 302 ++ L++ K KL V ++ D V + GV+G Sbjct: 929 VYNVSLRESVVKADDKFKKFLLPDEKLRTDVYKEDQKVMFYLQSIQDSHVHVSVSPGVQG 988 Query: 303 LVHVSEMDWTNKNIH-PSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETH 361 + + +++ P + + ID E + L A Sbjct: 989 KLDLLSCSDNVEDLKNPPAMFKPKCAYLGTITSIDRESSTLHLS--------RLGKATKL 1040 Query: 362 NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQ 421 G V ++ + + L G G +L+D+S + + +K + VL+ Sbjct: 1041 APGLVVNAQVAKKVPGKLLLSLPFGGKGFANLTDLSDSY-SSNPLSTFKVNQLLRCCVLE 1099 Query: 422 VDAERE-RISLGVKQLA------EDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGV 474 ++R R+SL ++ DP V +G IV G V + G L+ V Sbjct: 1100 CSSKRHVRVSLRPSKIGGKVRKINDPDYETVEDIVEGDIVRGYVEDCNKHGVFAALSHKV 1159 Query: 475 EGYLRASEASRDRVED---ATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKD 523 +G ++ A+ V VG V AK V K+ + LS+ KD Sbjct: 1160 KGRVQYKHATSYFVRKQDELKKFFPVGKLVTAKVLEVSYKSSHLELSLLEKD 1211 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 53/295 (17%), Positives = 113/295 (38%), Gaps = 13/295 (4%) Query: 256 SLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKN 315 +L K + ++ GT + VT++ ++G E G G VS + K Sbjct: 178 TLLQKAVAKEDLDLTLDTLTPGTLVEATVTSVQNHGILAEFL-GFTG--SVSRVHLPTKR 234 Query: 316 IHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQ--QFAETHNKGDRVE-GKIK 372 P G V+ +L I + + L + + E G + + Sbjct: 235 AEP---YRKGQRVKACILYIHPTTKTVGLSFQSRLWDGRTLVDVQELPAIGTVYKKAPVV 291 Query: 373 SITDF-GIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISL 431 + G+ + L G +S +S + E +K G + + V+ + + Sbjct: 292 HVWSGIGVTMKLSAETPGFAAVSQLS-DQPVESIENTFKPGTQHSCRVINCSPLDGQAIV 350 Query: 432 GVKQ-LAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVED 490 +K+ + E PF + K G +V GK+T+V + G TV L++ V G + + +++ Sbjct: 351 SLKKSVIEQPFLR-LQDLKPGQVVEGKITSVQSYGITVSLSNYVRGVVSKIHLADIILKN 409 Query: 491 ATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNN 545 + GD ++ + V R ++L+ + + +A+ + +++ Sbjct: 410 PAKKFNEGDMIKCRVLNVATAGRQLALTHKRTLLTSKLPIMASYQAAKPGTWAHG 464 >UniRef50_B0MBX8 Putative uncharacterized protein n=7 Tax=Clostridiales RepID=B0MBX8_9FIRM Length = 309 Score = 204 bits (520), Expect = 6e-51, Method: Composition-based stats. Identities = 87/273 (31%), Positives = 148/273 (54%), Gaps = 11/273 (4%) Query: 1 MTESFAQLFEESLKEIETR-----PGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN 55 M E + E+ E+E G IV G V+++ + ++D ++ + A ++ + Sbjct: 7 MAEEMKETMEQYENELEASFRKMDEGDIVEGDVLSVSDEEAVIDLKYYAQGILKASEYSD 66 Query: 56 AQGE---LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVI 112 + GD V + +V+DG G +LS+ +A + AW L+K E+ ++ + Sbjct: 67 DPNVTLTEALNEGDRVKAKVISVDDGEGNIVLSKREANQVLAWDRLQKLMEEETVLSLTV 126 Query: 113 NGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRA 172 G V GG V + GIR F+P S + + V D KE+E K+I +D+ RN +V+S + Sbjct: 127 GGVVNGGVIVYVEGIRGFIPASQLSLNYVEDLNTWLKKEVEAKIITVDESRNKLVLSAKE 186 Query: 173 VIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHP 231 V +++ E + + ++ GM ++G V+N+ YGAFVDLG G+ GL+HI+ + KR+K P Sbjct: 187 VEKAKAQEELNHKMAMMRPGMVLEGTVENIMPYGAFVDLGDGLSGLIHISQFSEKRIKSP 246 Query: 232 SEIVNVGDEITVKVLKFDRERTRVSLGLKQLGE 264 E+V G ++ VKVLK ++SL +K L E Sbjct: 247 KEMVEEGQKVKVKVLKI--ADNKISLSMKALEE 277 Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats. Identities = 68/296 (22%), Positives = 136/296 (45%), Gaps = 13/296 (4%) Query: 264 EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVN 323 E+ A ++ EG + G V +++D ++++ +G++ SE + N+ ++ +N Sbjct: 19 ENELEASFRKMDEGDIVEGDVLSVSDEEAVIDLKYYAQGILKASEYS-DDPNVTLTEALN 77 Query: 324 VGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGL 383 GD V+ V+ +D+ I L ++ + + + V G I Sbjct: 78 EGDRVKAKVISVDDGEGNIVLSKREANQVLAWDRLQKLMEEETVLSLTVGGVVNGGVIVY 137 Query: 384 DGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLA----ED 439 GI G + S +S N E+ KK E+ A ++ VD R ++ L K++ ++ Sbjct: 138 VEGIRGFIPASQLSLNYV-EDLNTWLKK--EVEAKIITVDESRNKLVLSAKEVEKAKAQE 194 Query: 440 PFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGD 499 N+ +A+ + G ++ G V + GA V+L DG+ G + S+ S R++ ++ G Sbjct: 195 ELNHKMAMMRPGMVLEGTVENIMPYGAFVDLGDGLSGLIHISQFSEKRIKSPKEMVEEGQ 254 Query: 500 EVEAKFTGVDRKNRAISLSVRAKDEADEKDAIAT---VNKQEDANFSNNAMAEAFK 552 +V+ K + + ISLS++A +E+ E + + T ++E A S + K Sbjct: 255 KVKVKVLKI--ADNKISLSMKALEESREAEKVETGIEYKEEEKAQTSLGDLLANLK 308 Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 68/153 (44%), Gaps = 9/153 (5%) Query: 46 SAIPAEQFK-NAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEK---A 101 IPA Q N +L + EV+ + V++ + +LS ++ ++ +A L Sbjct: 143 GFIPASQLSLNYVEDLNTWLKKEVEAKIITVDESRNKLVLSAKEVEKAKAQEELNHKMAM 202 Query: 102 YEDAETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRPVRDTLHLE--GKELEFKVIK 158 + G + + G V+L G+ + S + ++ + G++++ KV+K Sbjct: 203 MRPGMVLEGTVENIMPYGAFVDLGDGLSGLIHISQFSEKRIKSPKEMVEEGQKVKVKVLK 262 Query: 159 LDQKRNNVVVSRRAVIESENSAERDQLLENLQE 191 + N + +S +A+ ES + + + +E +E Sbjct: 263 I--ADNKISLSMKALEESREAEKVETGIEYKEE 293 Score = 50.3 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 21/96 (21%), Positives = 34/96 (35%), Gaps = 5/96 (5%) Query: 19 RPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ---GELEIQVGDEVDVALDAV 75 RPG ++ G V I VD G I QF + + ++ G +V V + + Sbjct: 204 RPGMVLEGTVENIMPYGAFVDLGDGLSGLIHISQFSEKRIKSPKEMVEEGQKVKVKVLKI 263 Query: 76 EDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGV 111 D + LS + + +E E E Sbjct: 264 ADN--KISLSMKALEESREAEKVETGIEYKEEEKAQ 297 >UniRef50_B6K2R4 U3 snoRNP-associated protein Rrp5 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K2R4_SCHJY Length = 1703 Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 94/454 (20%), Positives = 170/454 (37%), Gaps = 23/454 (5%) Query: 122 VELNGIRAFLPGSLVDVRPVRDTLHLEG-----KELEFKVIKLDQKRNNVVVSRRAVIES 176 V + G+R F S + V G + ++ N V+S ++ Sbjct: 433 VGVEGVRGFAHISRLSDSRVDKVDPSSGDYQLHSTHKARITGFSFVDNLFVLS----LQE 488 Query: 177 ENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIV 235 + ++++ G +KG V L G V L G++GL+ MA ++ P Sbjct: 489 SIIDQPFLRVDDIPVGKVIKGSVVRLFAQGVIVKLSEGINGLVPTAHMADVQLHFPERKF 548 Query: 236 NVGDEITVKVLKFDRERTRVSLGLKQLGED---PWVAIAKRYPEGTKLTGRVTNLTDYGC 292 G + +VL D +R RV L LK+ + P + + G K G + + G Sbjct: 549 KEGLPVKCRVLAVDSDRKRVLLTLKKSLLNSDLPIIDSYESVQPGAKAVGVFARILNTGA 608 Query: 293 FVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCK-A 351 VE V G + +EM VG V V V++ D E R++ L ++ Sbjct: 609 VVEFYNHVRGFLPTAEMSEAY-IQDARDHFKVGQTVSVTVVNCDPETRKMRLSCREQNWT 667 Query: 352 NPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLV---HLSDISWNVAGEEAVRE 408 N Q G V G + T+ + + L ++G++ HLSD + + Sbjct: 668 NERSQRFTDLEVGSVVSGAVSQKTENSVIVDLGNSVNGVIQVGHLSDGDAKKCQKILSKI 727 Query: 409 YKKGDEIAAVVLQVDAERERISLGVKQLAEDPFN-----NWVALNKKGAIVTGKVTAVDA 463 +VL+ D E+ + L +KQ D ++ K+G G V + Sbjct: 728 RATTKLSEVLVLRKDLEKRIVFLTLKQSLIDAAKAGMLPKTLSDLKEGVKYAGFVKNITE 787 Query: 464 KGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKD 523 G +E A+GV + S + V + + +D + +S++ D Sbjct: 788 FGVFIEFANGVTALAPKAYLSENYVPLPAALFKPFQSLTCVCFSIDMEKERALVSLKPLD 847 Query: 524 EADEKDAIATVNKQEDANFSNNAMAEAFKAAKGE 557 + +EK T +K + ++ +A+ G+ Sbjct: 848 KVNEKVDEITESKYVVIEPVDESITKAYDYTTGK 881 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 105/596 (17%), Positives = 222/596 (37%), Gaps = 68/596 (11%) Query: 10 EESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEV- 68 E S + + GS+V G V ++ V+VD G I + + ++ ++ Sbjct: 669 ERSQRFTDLEVGSVVSGAVSQKTENSVIVDLGNSVNGVIQVGHLSDGDAKKCQKILSKIR 728 Query: 69 ------DVALDAVEDGFGETLLSREKAKRHEAWITLEKA----YEDAETVTGVINGKVKG 118 +V + + L+ +++ A + ++ G + + Sbjct: 729 ATTKLSEVLVLRKDLEKRIVFLTLKQSLIDAAKAGMLPKTLSDLKEGVKYAGFVKNITEF 788 Query: 119 GFTVEL-NGIRAFLPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRAVIE 175 G +E NG+ A P + + V L + L +D ++ +VS + + + Sbjct: 789 GVFIEFANGVTALAPKAYLSENYVPLPAALFKPFQSLTCVCFSIDMEKERALVSLKPLDK 848 Query: 176 -----SENSAERDQLLENLQE----------GMEVKGIVKNLTDYGAFVDL-GGVDGLLH 219 E + + ++E + E G G++ ++ +DL V G + Sbjct: 849 VNEKVDEITESKYVVIEPVDESITKAYDYTTGKLTWGVISSVKATQLNIDLAKNVHGRVD 908 Query: 220 ITDMAWKR--VKHPSE---IVNVGDEITVKVLKFDRERT--------RVS------LGLK 260 +++ + PS+ GD+I V+VL + RVS L +K Sbjct: 909 VSEAFDNFEDISDPSKPFSTFKKGDKIQVRVLGTHDAKNHKFLPISHRVSPRQFLELSIK 968 Query: 261 Q--LGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHP 318 + + + A + +G V N T +V + + G + + + ++ Sbjct: 969 PSVMKQTEFSGEALTFKKGDTCIAFVNNTTPECIWVSVGSNLRGRIAALDASNDLETLNS 1028 Query: 319 -SKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDF 377 ++ VG ++ VL ++L + + ET + GD++ G+I +I D Sbjct: 1029 ITEKFPVGSAIQCTVLS---SGEILTLSAMEHVVDY-----ETISAGDKLLGRISNINDM 1080 Query: 378 GIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQL- 436 G+ + L G + G V +D+S + + + + VL VD +I+L + Sbjct: 1081 GMIVQLPGALSGRVSRTDVSDDFE-TSPNSLFSRNQFVRVYVLSVDVPNRKIALSTRASH 1139 Query: 437 ------AEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVED 490 +DP + + G VT V G V L V G ++ +E +++ Sbjct: 1140 FEEGKEIKDPEIKSFEDVEMNRVYRGFVTNVADTGLFVTLGRNVVGRVKIAELFDSFIKE 1199 Query: 491 ATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNA 546 V V+AK VD++ + I LS++ + ++ + ++ E + + Sbjct: 1200 WKPHFQVSQLVKAKVVHVDQEKKRIELSLKPSRVSSKEASAKEFSEIEVGSNVDGT 1255 Score = 194 bits (493), Expect = 8e-48, Method: Composition-based stats. Identities = 104/597 (17%), Positives = 218/597 (36%), Gaps = 77/597 (12%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQGELEIQVGDEVDVALD 73 + + G G V I + V ++ + P + + Sbjct: 771 DLKEGVKYAGFVKNITEFGVFIEFANGVTALAPKAYLSENYVPLPAALFKPFQSLTCVCF 830 Query: 74 AVEDGFGETLLSREKAKR-HEAWITLEKA-----------------YEDAETVTGVINGK 115 +++ L+S + + +E + ++ Y + GVI+ Sbjct: 831 SIDMEKERALVSLKPLDKVNEKVDEITESKYVVIEPVDESITKAYDYTTGKLTWGVISSV 890 Query: 116 VKGGFTVELNGI--------RAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVV 167 ++L AF + + +G +++ +V+ +N+ Sbjct: 891 KATQLNIDLAKNVHGRVDVSEAFDNFEDISDPSKPFSTFKKGDKIQVRVLGTHDAKNHKF 950 Query: 168 VSR------RAVIESENSAERDQLLE------NLQEGMEVKGIVKNLTDYGAFVDLG-GV 214 + R +E + E ++G V N T +V +G + Sbjct: 951 LPISHRVSPRQFLELSIKPSVMKQTEFSGEALTFKKGDTCIAFVNNTTPECIWVSVGSNL 1010 Query: 215 DGLLHITDMAWK--RVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAK 272 G + D + + +E VG I VL L L + V + Sbjct: 1011 RGRIAALDASNDLETLNSITEKFPVGSAIQCTVLSSGE-----ILTLSAMEH---VVDYE 1062 Query: 273 RYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMV 332 G KL GR++N+ D G V++ + G V +++ + P+ + + V V V Sbjct: 1063 TISAGDKLLGRISNINDMGMIVQLPGALSGRVSRTDVSDDFE-TSPNSLFSRNQFVRVYV 1121 Query: 333 LDIDEERRRISLGLKQCK-------ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDG 385 L +D R+I+L + +P + E G + ++ D G+F+ L Sbjct: 1122 LSVDVPNRKIALSTRASHFEEGKEIKDPEIKSFEDVEMNRVYRGFVTNVADTGLFVTLGR 1181 Query: 386 GIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQL---AEDPFN 442 + G V ++++ ++ +E ++ + A V+ VD E++RI L +K +++ Sbjct: 1182 NVVGRVKIAEL-FDSFIKEWKPHFQVSQLVKAKVVHVDQEKKRIELSLKPSRVSSKEASA 1240 Query: 443 NWVALNKKGAIVTGKVTAVDAKGATVELA--DGVEGYLRASEASRDRVEDATLVLSVGDE 500 + + G+ V G V + G + L D + G SE + V D T + S GD+ Sbjct: 1241 KEFSEIEVGSNVDGTVIRCEDFGVLIRLDGTDNIVGLCHKSEIADTTVNDVTKLYSAGDK 1300 Query: 501 VEAKFTGVDRKNRAISLSVRA-----------KDEADEKDAIATVNKQEDANFSNNA 546 V A VD + R ++L +++ + E+D ++ +++ED++ + + Sbjct: 1301 VRAHVLSVDPEKRRVALGLKSSYFDADSDVDMYESGAEEDLESSADEEEDSDEAMDE 1357 Score = 168 bits (427), Expect = 4e-40, Method: Composition-based stats. Identities = 97/572 (16%), Positives = 199/572 (34%), Gaps = 76/572 (13%) Query: 13 LKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIP-------AEQFKNAQGELE---- 61 G+IV G + I+ + V +P + + E++ Sbjct: 119 FSYKSVVEGTIVFGRISEINTLDLAVSLPNCLTGYVPITSISDSLSERLDKLDEVDEDNK 178 Query: 62 -------------IQVGDEVDVALDAVEDGF-----GETLLSREKAKRHEAWITLEKAYE 103 VG V + ++ + LS + + Sbjct: 179 SVAQESFPDLLDFYTVGQWVRARVTSITNDSSSKKKKRIELSLRPQDVNGGLGA--DGFV 236 Query: 104 DAETVTGVINGKVKGGFTVE--LNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQ 161 + V+ G ++ + FLP +T +EG+ + V + Sbjct: 237 KGSVIQTVVTSWEDHGIAMDLGIEDFTGFLPL----GAYNPETEFMEGQTVLCTVTS--K 290 Query: 162 KRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV----DGL 217 K ++ S + ++ ++ + G ++ ++ + G L GV L Sbjct: 291 KDRVFQLAMHQA--SPKALDKFPSVQAILPGNLANVLITDVLENGVTGKLMGVLNVTSDL 348 Query: 218 LHITDMAWKRVKH--------PSEIV------NVGDEITVKVLKFDRERTRVSLGLKQLG 263 +H + +R+ + P+ I+ +T D + Sbjct: 349 MHSSLSQNERLANEFTIAKTRPARILYTIPSSPPTVAVTFLPHAVDFNK------TSAEQ 402 Query: 264 EDPWVAIAKRYPEGTKLTGRVTNLTD-YGCFVEIE-EGVEGLVHVSEMDWTN--KNIHPS 319 E+P + + T +V+ ++ G F ++ EGV G H+S + + K S Sbjct: 403 ENPLEKLPLGF---TVEEAKVSAVSPSLGIFCDVGVEGVRGFAHISRLSDSRVDKVDPSS 459 Query: 320 KVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGI 379 + + + L L++ + + G ++G + + G+ Sbjct: 460 GDYQLHSTHKARITGFSFVDNLFVLSLQESIIDQPFLRVDDIPVGKVIKGSVVRLFAQGV 519 Query: 380 FIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAED 439 + L GI+GLV + ++ +V R++K+G + VL VD++R+R+ L +K+ + Sbjct: 520 IVKLSEGINGLVPTAHMA-DVQLHFPERKFKEGLPVKCRVLAVDSDRKRVLLTLKKSLLN 578 Query: 440 ---PFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLS 496 P + + GA G + GA VE + V G+L +E S ++DA Sbjct: 579 SDLPIIDSYESVQPGAKAVGVFARILNTGAVVEFYNHVRGFLPTAEMSEAYIQDARDHFK 638 Query: 497 VGDEVEAKFTGVDRKNRAISLSVRAKDEADEK 528 VG V D + R + LS R ++ +E+ Sbjct: 639 VGQTVSVTVVNCDPETRKMRLSCREQNWTNER 670 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 84/366 (22%), Positives = 149/366 (40%), Gaps = 27/366 (7%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL 60 + S + E S + + + G V + + V G I A N L Sbjct: 967 IKPSVMKQTEFSGEALTFKKGDTCIAFVNNTTPECIWVSVGSNLRGRIAALDASNDLETL 1026 Query: 61 -----EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGK 115 + VG + + + + +L+ + + T+ + + G I+ Sbjct: 1027 NSITEKFPVGSAIQCTVLSSGE-----ILTLSAMEHVVDYETISA----GDKLLGRISNI 1077 Query: 116 VKGGFTVELNG-IRAFLPGSLV--DVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRA 172 G V+L G + + + V D ++L + + V+ +D + +S RA Sbjct: 1078 NDMGMIVQLPGALSGRVSRTDVSDDFETSPNSLFSRNQFVRVYVLSVDVPNRKIALSTRA 1137 Query: 173 VIESENSAERD---QLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRV 228 E +D + E+++ +G V N+ D G FV LG V G + I ++ + Sbjct: 1138 SHFEEGKEIKDPEIKSFEDVEMNRVYRGFVTNVADTGLFVTLGRNVVGRVKIAELFDSFI 1197 Query: 229 KHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPE---GTKLTGRVT 285 K V + KV+ D+E+ R+ L LK A AK + E G+ + G V Sbjct: 1198 KEWKPHFQVSQLVKAKVVHVDQEKKRIELSLKPSRVSSKEASAKEFSEIEVGSNVDGTVI 1257 Query: 286 NLTDYGCFVEIE--EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRIS 343 D+G + ++ + + GL H SE+ T N +K+ + GD V VL +D E+RR++ Sbjct: 1258 RCEDFGVLIRLDGTDNIVGLCHKSEIADTTVN-DVTKLYSAGDKVRAHVLSVDPEKRRVA 1316 Query: 344 LGLKQC 349 LGLK Sbjct: 1317 LGLKSS 1322 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 68/491 (13%), Positives = 159/491 (32%), Gaps = 55/491 (11%) Query: 104 DAETVTGVINGKVKGGFTVEL-NGIRAFLPGSLVDVRPVRDTLHL--------------- 147 + V G I+ V L N + ++P + + L Sbjct: 126 EGTIVFGRISEINTLDLAVSLPNCLTGYVPITSISDSLSERLDKLDEVDEDNKSVAQESF 185 Query: 148 --------EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIV 199 G+ + +V + ++ R + + +G ++ +V Sbjct: 186 PDLLDFYTVGQWVRARVTSITNDSSSKKKKRIELSLRPQDVNGGLGADGFVKGSVIQTVV 245 Query: 200 KNLTDYGAFVDLG--GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSL 257 + D+G +DLG G L + +P G + V ++ L Sbjct: 246 TSWEDHGIAMDLGIEDFTGFLPL------GAYNPETEFMEGQTVLCTVTS--KKDRVFQL 297 Query: 258 GLKQLGEDPWVAIAKRYP--EGTKLTGRVTNLTDYGCFVEIEEGVEGLVHV-SEMDWTN- 313 + Q G +T++ + G ++ G+++V S++ ++ Sbjct: 298 AMHQASPKALDKFPSVQAILPGNLANVLITDVLENGVTGKLM----GVLNVTSDLMHSSL 353 Query: 314 -KNIHPSKVVNVGDVVEVMVL-DIDEERRRISLGLKQCKANPWQQFAETHNK-------G 364 +N + + +L I +++ + + AE N Sbjct: 354 SQNERLANEFTIAKTRPARILYTIPSSPPTVAVTFLPHAVDFNKTSAEQENPLEKLPLGF 413 Query: 365 DRVEGKIKSITD-FGIFIGLD-GGIDGLVHLSDISWNVAG--EEAVREYKKGDEIAAVVL 420 E K+ +++ GIF + G+ G H+S +S + + + +Y+ A + Sbjct: 414 TVEEAKVSAVSPSLGIFCDVGVEGVRGFAHISRLSDSRVDKVDPSSGDYQLHSTHKARIT 473 Query: 421 QVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRA 480 L +++ D V G ++ G V + A+G V+L++G+ G + Sbjct: 474 GFSFVDNLFVLSLQESIIDQPFLRVDDIPVGKVIKGSVVRLFAQGVIVKLSEGINGLVPT 533 Query: 481 SEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDA 540 + + ++ G V+ + VD + + L+++ + I + + Sbjct: 534 AHMADVQLHFPERKFKEGLPVKCRVLAVDSDRKRVLLTLKKSLLNSDLPIIDSYESVQPG 593 Query: 541 NFSNNAMAEAF 551 + A Sbjct: 594 AKAVGVFARIL 604 >UniRef50_C5XCN3 Putative uncharacterized protein Sb02g006000 n=1 Tax=Sorghum bicolor RepID=C5XCN3_SORBI Length = 1862 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 95/473 (20%), Positives = 194/473 (41%), Gaps = 53/473 (11%) Query: 14 KEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQF----KNAQGELEIQVGDEVD 69 K+ + GS+V ++ I +L+ G I + + ++++G ++ Sbjct: 1003 KKSGYKIGSLVEAEIIDIKPLELLLQFGGNLHGRIHITEVPEKDSDEHPFSKLRIGQKLT 1062 Query: 70 VALDAVEDGFGET------LLSREKAKRHEAWITL----EKAYEDAETVTGVINGKVKGG 119 + A + G++ LS + + L E+ + E V + K Sbjct: 1063 ARIVAEAEPSGKSGKNFKWELSIRPCIVNGEFDELTAQKEQKHTTNEIVRAYVVKVDKEW 1122 Query: 120 FTVELN-GIRA--FLPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVS----- 169 + ++ + A F+ S + +++ EG+ ++ +VI +++++ + + Sbjct: 1123 VWLTVSRNVMAHLFVLDSSSEPSELKEFQQRFSEGQAVKGRVINVNREKRLLRLKALDNQ 1182 Query: 170 RRAVIESENSAERDQLLENLQEGMEVKGIVKNLTD--YGAFVDLG-GVDGLLHITDMAWK 226 + E + + E ++G + G V+ + G V +G + G +H T++ Sbjct: 1183 CTQLNIDEIQQSKSSVFEQTKQGDIIGGRVQKILPGVGGLVVQIGPHLRGRVHYTEIVDS 1242 Query: 227 RVKHPSEIVNVGDEITVKVLKFDRERT---RVSLGLKQ----------------LGEDPW 267 V P + G + KVL R RV L L+ Sbjct: 1243 WVTEPLSGFHEGQFVKCKVLSVSRSSEGSLRVDLSLRSSNLIRDSNNSGLVDDLATCTSR 1302 Query: 268 VAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDV 327 + K GT++ G V N+ GCF+ I VE + +S + +P K VG + Sbjct: 1303 IEKIKDLLPGTEIKGYVKNVNSKGCFIMISRMVEARITLSNLSDEY-VENPQKDFPVGML 1361 Query: 328 VEVMVLDIDEERRRISLGLKQCKANPWQQFAE----THNKGDRVEGKIKSITDFGIFIGL 383 V VL D R+ L++ + ++ + + GD ++G++K + FG+F+ + Sbjct: 1362 VHGRVLSTDPSSGRVEASLRKTTGSKLEKLDDISYSDLHVGDIIDGQVKRVESFGLFVTI 1421 Query: 384 -DGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQ 435 + GL H+S++S + YK GD + A +L++D +R R+SLG+K+ Sbjct: 1422 RRSELVGLCHVSELSDEPVVD-INSCYKAGDMVKAKILKIDEKRHRVSLGMKK 1473 Score = 170 bits (432), Expect = 1e-40, Method: Composition-based stats. Identities = 85/521 (16%), Positives = 187/521 (35%), Gaps = 51/521 (9%) Query: 20 PGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQG----ELEIQVGDEVDVALDAV 75 PG +V V ++ ++ V++ + N+ + + +V+ + V Sbjct: 303 PGMMVNARVHSVLENGVMLSFLTYFSGTVDIFNLLNSFPSGNWKDDYSKNKKVNARILFV 362 Query: 76 EDGFGETLLSREKAKRHEAWITLEKAYEDAETV-TGVINGKVKG-GFTVEL---NGIRAF 130 + L+ K H + + + + K G +E+ F Sbjct: 363 DPSTRAVGLTLNKHLLHLEVPPIN--LKAGDIYDKSKVLRVDKKAGLFLEIPSPTPSPGF 420 Query: 131 LPGSLVDVRPVRDTLHLE-GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENL 189 + V + ++ + G L +++ + + + + + D ++ Sbjct: 421 ISIHDVSDKDAKNLEKFKEGSSLRVRILGVRNLEGVAIGTVKDSAFEGSVFTHD----DV 476 Query: 190 QEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAW-KRVKHPSEIVNVGDEITVKVLK 247 + GM V+ V + +GA V GV L + M+ + V P + VG E+ +VL Sbjct: 477 KPGMLVRAKVATVEPFGAIVQFSSGVKALCPLPHMSELEHVVKPPKKFKVGAELLFRVLG 536 Query: 248 FDRERTRVSLGLKQLGEDPWVAIAKRY---PEGTKLTGRVTNLTDYGCFVEIEEGVEGLV 304 + RV++ K+ + + Y G G +T + +GCFV+ GV+G V Sbjct: 537 C--KSKRVTVTYKKSLVKSKLDVLASYADAKIGLVTHGWITKIEKHGCFVKFYNGVQGFV 594 Query: 305 HVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKG 364 S++ V +VG VV+ ++++ R++++ ++ +T G Sbjct: 595 SRSDLGLEA-GTEAENVYHVGQVVKCRIINVIPASRKLNVSF--VISHNRVIPIDTPKLG 651 Query: 365 DRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDA 424 V G ++ +T + + ++G G + ++ + D Sbjct: 652 SIVSGVVERLTPAAVVVSVNGFSKGTILNEHLADHH----------------------DI 689 Query: 425 ERERISLGVKQLA---EDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRAS 481 E + L K + + ++ G +V G + + G V + G+ Sbjct: 690 EGHNLVLSAKHSLINCANDIPSEISQMHPGVVVHGYICNIIESGCFVRFLGHLTGFSPKD 749 Query: 482 EASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAK 522 +A R+E + VG V + V + + LS++ Sbjct: 750 KAVDRRIERLSDAFYVGQSVRSHILSVTAETARVKLSLQQS 790 Score = 168 bits (426), Expect = 5e-40, Method: Composition-based stats. Identities = 99/595 (16%), Positives = 202/595 (33%), Gaps = 81/595 (13%) Query: 24 VRGVVVAIDKDVVLVDA--GLKSESAIPAEQF-KNAQGELEIQVGDEVDVAL--DAVEDG 78 V VV I +++ + P + G + V + D Sbjct: 919 VNAVVEIIKGSYLVLSIPEYNYAIGFAPLMDYNSQLLPHHHYDNGQRITVVVGNIPSSDS 978 Query: 79 FGETLLSREKAKRHEAWITLEKA-----YEDAETVTGVINGKVKGGFTVELNG-IRAFL- 131 G +L + + ++ A ++A Y+ V I ++ G + + Sbjct: 979 SGRLILLPKASAQYSALSESKRAKKKSGYKIGSLVEAEIIDIKPLELLLQFGGNLHGRIH 1038 Query: 132 ----PGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNV-------VVSRRAVIESENSA 180 P D P G++L +++ + + R ++ E Sbjct: 1039 ITEVPEKDSDEHPFSKLR--IGQKLTARIVAEAEPSGKSGKNFKWELSIRPCIVNGEFDE 1096 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHI------TDMAWKRVKHPSEI 234 Q + V+ V + ++ + + + H+ ++ + +K + Sbjct: 1097 LTAQKEQKHTTNEIVRAYVVKVDKEWVWLTVS-RNVMAHLFVLDSSSEPSE--LKEFQQR 1153 Query: 235 VNVGDEITVKVLKFDRERTRVSLGLKQLG-----------EDPWVAIAKRYPEGTKLTGR 283 + G + +V+ +RE+ L LK L + ++ ++ +G + GR Sbjct: 1154 FSEGQAVKGRVINVNREKR--LLRLKALDNQCTQLNIDEIQQSKSSVFEQTKQGDIIGGR 1211 Query: 284 VTNLTDY--GCFVEIEEGVEGLVHVSEM--DWTNKNIHPSKVVNVGDVVEVMVLDIDEER 339 V + G V+I + G VH +E+ W P + G V+ VL + Sbjct: 1212 VQKILPGVGGLVVQIGPHLRGRVHYTEIVDSW---VTEPLSGFHEGQFVKCKVLSVSRSS 1268 Query: 340 R---RISLGLKQ----------------CKANPWQQFAETHNKGDRVEGKIKSITDFGIF 380 R+ L L+ + + G ++G +K++ G F Sbjct: 1269 EGSLRVDLSLRSSNLIRDSNNSGLVDDLATCTSRIEKIKDLLPGTEIKGYVKNVNSKGCF 1328 Query: 381 IGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDP 440 I + ++ + LS++S E +++ G + VL D R+ +++ Sbjct: 1329 IMISRMVEARITLSNLSDEYV-ENPQKDFPVGMLVHGRVLSTDPSSGRVEASLRKTTGSK 1387 Query: 441 FNNW----VALNKKGAIVTGKVTAVDAKGATVELADG-VEGYLRASEASRDRVEDATLVL 495 + G I+ G+V V++ G V + + G SE S + V D Sbjct: 1388 LEKLDDISYSDLHVGDIIDGQVKRVESFGLFVTIRRSELVGLCHVSELSDEPVVDINSCY 1447 Query: 496 SVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEA 550 GD V+AK +D K +SL ++ + D A N ED + ++ A Sbjct: 1448 KAGDMVKAKILKIDEKRHRVSLGMKKSYF--DSDLTADTNDDEDDESALMDISVA 1500 Score = 161 bits (407), Expect = 7e-38, Method: Composition-based stats. Identities = 82/525 (15%), Positives = 188/525 (35%), Gaps = 54/525 (10%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE------------IQV 64 P + GVV+ +++ +++ + +E + + + V Sbjct: 141 NISPNMKLWGVVIEVNQKDIVLSLPGGIRGFVRSEDVCDIALQENRKDSENSLCAKVVHV 200 Query: 65 GDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL 124 G V + V+D ++ + + + G+ + Sbjct: 201 GQLVPCIVLRVDDDK-----------------------KEGKVLAAQVKSIEDHGYILHF 237 Query: 125 NGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVV---VSRRAVIESENSAE 181 G+ +F S + ++ + +E ++L V+K K +V + +S Sbjct: 238 -GVSSF---SGFMQKDDKENVKIERRQLMHCVVKAIDKTRAIVHLSSDEDLLCKSIIKDL 293 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVD-LGGVDGLLHITDMAWKRVK-HPSEIVNVGD 239 + +++L GM V V ++ + G + L G + I ++ + + + Sbjct: 294 KGLSIDHLIPGMMVNARVHSVLENGVMLSFLTYFSGTVDIFNLLNSFPSGNWKDDYSKNK 353 Query: 240 EITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDY-GCFVEIEE 298 ++ ++L D V L L + V +V + G F+EI Sbjct: 354 KVNARILFVDPSTRAVGLTLNKHLLHLEVPPINLKAGDIYDKSKVLRVDKKAGLFLEIPS 413 Query: 299 GV--EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQ 356 G + + ++ +K+ + G + V +L + +K Sbjct: 414 PTPSPGFISIHDVS--DKDAKNLEKFKEGSSLRVRILGVRNLEGVAIGTVKDSAFEGSVF 471 Query: 357 FAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIA 416 + G V K+ ++ FG + G+ L L +S + +++K G E+ Sbjct: 472 THDDVKPGMLVRAKVATVEPFGAIVQFSSGVKALCPLPHMSELEHVVKPPKKFKVGAELL 531 Query: 417 AVVLQVDAERERISLGVKQLAEDPFNNWVALN---KKGAIVTGKVTAVDAKGATVELADG 473 VL + +R+++ K+ + +A K G + G +T ++ G V+ +G Sbjct: 532 FRVLGC--KSKRVTVTYKKSLVKSKLDVLASYADAKIGLVTHGWITKIEKHGCFVKFYNG 589 Query: 474 VEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLS 518 V+G++ S+ + +A V VG V+ + V +R +++S Sbjct: 590 VQGFVSRSDLGLEAGTEAENVYHVGQVVKCRIINVIPASRKLNVS 634 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 98/567 (17%), Positives = 207/567 (36%), Gaps = 79/567 (13%) Query: 21 GSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGFG 80 GS+V G V AI++ ++++ + E + G ++VG V + + DG Sbjct: 827 GSLVEGEVGAIEEYGIILNFKDHLDVVGLIEH--HQLGGSSVEVGSSVKGLVLDLSDGVV 884 Query: 81 ETLL------SREKAKRHEAWITLEKA-YEDAETVTGVINGKVKGGFTV----ELNGIRA 129 L S + + A E E V V+ +KG + V E N Sbjct: 885 NLSLKPELIGSVRNVGKKKKRQRAAVADLELHEEVNAVV-EIIKGSYLVLSIPEYNYAIG 943 Query: 130 FLP----GSLVDVRPVRDTLHLEGKELEFKVIKL--DQKRNNVVVSRRAVIESEN--SAE 181 F P S + D G+ + V + +++ +A + ++ Sbjct: 944 FAPLMDYNSQLLPHHHYDN----GQRITVVVGNIPSSDSSGRLILLPKASAQYSALSESK 999 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWK-RVKHPSEIVNVGD 239 R + + G V+ + ++ + GG + G +HIT++ K +HP + +G Sbjct: 1000 RAKKKSGYKIGSLVEAEIIDIKPLELLLQFGGNLHGRIHITEVPEKDSDEHPFSKLRIGQ 1059 Query: 240 EITVKVLKFDRERTRVS------LGLKQLGEDPW-----VAIAKRYPEGTKLTGRVTNLT 288 ++T +++ + L ++ + +++ + V + Sbjct: 1060 KLTARIVAEAEPSGKSGKNFKWELSIRPCIVNGEFDELTAQKEQKHTTNEIVRAYVVKVD 1119 Query: 289 DYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKV---VNVGDVVEVMVLDIDEERRRISLG 345 ++ + V + H+ +D +++ + + G V+ V++++ E+R + L Sbjct: 1120 KEWVWLTVSRNV--MAHLFVLDSSSEPSELKEFQQRFSEGQAVKGRVINVNREKRLLRLK 1177 Query: 346 LKQCKANPWQQFA---------ETHNKGDRVEGKIKSITDF--GIFIGLDGGIDGLVHLS 394 + E +GD + G+++ I G+ + + + G VH + Sbjct: 1178 ALDNQCTQLNIDEIQQSKSSVFEQTKQGDIIGGRVQKILPGVGGLVVQIGPHLRGRVHYT 1237 Query: 395 DI--SWNVAGEEAVREYKKGDEIAAVVLQVDAERE---RISLGVKQ-----------LAE 438 +I SW E + + +G + VL V E R+ L ++ L + Sbjct: 1238 EIVDSW---VTEPLSGFHEGQFVKCKVLSVSRSSEGSLRVDLSLRSSNLIRDSNNSGLVD 1294 Query: 439 D-----PFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATL 493 D + G + G V V++KG + ++ VE + S S + VE+ Sbjct: 1295 DLATCTSRIEKIKDLLPGTEIKGYVKNVNSKGCFIMISRMVEARITLSNLSDEYVENPQK 1354 Query: 494 VLSVGDEVEAKFTGVDRKNRAISLSVR 520 VG V + D + + S+R Sbjct: 1355 DFPVGMLVHGRVLSTDPSSGRVEASLR 1381 Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats. Identities = 96/595 (16%), Positives = 195/595 (32%), Gaps = 92/595 (15%) Query: 6 AQLFEES-LKEIETRPGSIVRGVVVAIDKDVVLVDA--GLKSESAIP-AEQFKN-AQGEL 60 FE S + +PG +VR V ++ +V G+K+ +P + ++ + Sbjct: 463 DSAFEGSVFTHDDVKPGMLVRAKVATVEPFGAIVQFSSGVKALCPLPHMSELEHVVKPPK 522 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAE--TVTGVINGKVKG 118 + +VG E+ + + ++ +K+ L + G I K Sbjct: 523 KFKVGAELLFRVLGCK--SKRVTVTYKKSLVKSKLDVLASYADAKIGLVTHGWITKIEKH 580 Query: 119 GFTVEL-NGIRAFLPGSLVDVR--PVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIE 175 G V+ NG++ F+ S + + + ++ G+ ++ ++I + + SR+ + Sbjct: 581 GCFVKFYNGVQGFVSRSDLGLEAGTEAENVYHVGQVVKCRIINV------IPASRKLNVS 634 Query: 176 SENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVD-GLLHITDMAWKRVKHPSEI 234 S R ++ + G V G+V+ LT V + G G + +A Sbjct: 635 FVISHNRVIPIDTPKLGSIVSGVVERLTPAAVVVSVNGFSKGTILNEHLADHH------- 687 Query: 235 VNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYP---EGTKLTGRVTNLTDYG 291 D E + L K + I G + G + N+ + G Sbjct: 688 --------------DIEGHNLVLSAKHSLINCANDIPSEISQMHPGVVVHGYICNIIESG 733 Query: 292 CFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKA 351 CFV + G + + S VG V +L + E R+ L L+Q Sbjct: 734 CFVRFLGHLTGFSPKDK-AVDRRIERLSDAFYVGQSVRSHILSVTAETARVKLSLQQSMC 792 Query: 352 NPWQ----------------------QFAETHNKGDRVEGKIKSITDFGIFIGLDGGID- 388 + +A T G VEG++ +I ++GI + +D Sbjct: 793 SSTDSSFIQGYFLLDQKIAALKYSSNDWAHTFGIGSLVEGEVGAIEEYGIILNFKDHLDV 852 Query: 389 -GLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVAL 447 GL+ + + G + +VL D ++L +K N Sbjct: 853 VGLIEHHQLG--------GSSVEVGSSVKGLVL--DLSDGVVNLSLKPELIGSVRNVGKK 902 Query: 448 NKKGAIVTGKVTAVDAKGATVELADGV------------EGYLRASEASRDRVEDATLVL 495 K+ + + A VE+ G G+ + + + Sbjct: 903 KKRQRAAVADLELHEEVNAVVEIIKGSYLVLSIPEYNYAIGFAPLMDYNSQLL--PHHHY 960 Query: 496 SVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEA 550 G + + + + L + K A + ++ + + ++ EA Sbjct: 961 DNGQRITVVVGNIPSSDSSGRLILLPKASAQYSALSESKRAKKKSGYKIGSLVEA 1015 Score = 125 bits (315), Expect = 4e-27, Method: Composition-based stats. Identities = 96/581 (16%), Positives = 188/581 (32%), Gaps = 92/581 (15%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQG---ELEIQVGDEVDVALD 73 + + G + G + I+K V + + G E VG V + Sbjct: 563 DAKIGLVTHGWITKIEKHGCFVKFYNGVQGFVSRSDLGLEAGTEAENVYHVGQVVKCRII 622 Query: 74 AVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGI-RAFLP 132 V + +S + I K V+GV+ V +NG + + Sbjct: 623 NVIPASRKLNVSFVISHNRVIPIDTPKL---GSIVSGVVERLTPAAVVVSVNGFSKGTIL 679 Query: 133 GSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEG 192 + D + +N+V+S + + + + + + + G Sbjct: 680 NEHLADHH-------------------DIEGHNLVLSAKHSLINCANDIPSE-ISQMHPG 719 Query: 193 MEVKGIVKNLTDYGAFVD-LGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRE 251 + V G + N+ + G FV LG + G +R++ S+ VG + +L E Sbjct: 720 VVVHGYICNIIESGCFVRFLGHLTGFSPKDKAVDRRIERLSDAFYVGQSVRSHILSVTAE 779 Query: 252 RTRVSLGLKQ----------------------LGEDPWVAIAKRYPEGTKLTGRVTNLTD 289 RV L L+Q + A + G+ + G V + + Sbjct: 780 TARVKLSLQQSMCSSTDSSFIQGYFLLDQKIAALKYSSNDWAHTFGIGSLVEGEVGAIEE 839 Query: 290 YGCFVEIEEGVE--GLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLK 347 YG + ++ ++ GL+ ++ + V VG V+ +VL D ++L LK Sbjct: 840 YGIILNFKDHLDVVGLIEHHQLGGS--------SVEVGSSVKGLVL--DLSDGVVNLSLK 889 Query: 348 QCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGG------------IDGLVHLSD 395 + + + ++ + + + G G L D Sbjct: 890 PELIGSVRNVGKKKKRQRAAVADLELHEEVNAVVEIIKGSYLVLSIPEYNYAIGFAPLMD 949 Query: 396 ISWNVAGEEAVREYKKGDEIAAVVLQV--DAERERISLGVK------QLAEDPFNNWVAL 447 + + Y G I VV + R+ L K L+E + Sbjct: 950 YNSQLL---PHHHYDNGQRITVVVGNIPSSDSSGRLILLPKASAQYSALSESKRAKKKSG 1006 Query: 448 NKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEAS-RDRVEDATLVLSVGDEVEAKFT 506 K G++V ++ + ++ + G + +E +D E L +G ++ A+ Sbjct: 1007 YKIGSLVEAEIIDIKPLELLLQFGGNLHGRIHITEVPEKDSDEHPFSKLRIGQKLTARIV 1066 Query: 507 ------GVDRKNRAISLSVRAKDEADEKDAIATVNKQEDAN 541 G KN LS+R E D + +Q+ Sbjct: 1067 AEAEPSGKSGKNFKWELSIRPCIVNGEFDELTAQKEQKHTT 1107 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 76/468 (16%), Positives = 158/468 (33%), Gaps = 63/468 (13%) Query: 110 GVINGKVKGGFTVEL-NGIRAFLPGSL----VDVRPVRDTLH--------LEGKELEFKV 156 GV+ + + L GIR F+ S + ++ R G+ + V Sbjct: 150 GVVIEVNQKDIVLSLPGGIRGFV-RSEDVCDIALQENRKDSENSLCAKVVHVGQLVPCIV 208 Query: 157 IKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDG 216 +++D + +EG + VK++ D+G + G Sbjct: 209 LRVDDDK--------------------------KEGKVLAAQVKSIEDHGYILHFG---- 238 Query: 217 LLHITDMAWKRVKHPSEIVNVG--DEITVKVLKFDRERTRVSLG------LKQLGEDPWV 268 ++ + K E V + + V D+ R V L K + +D Sbjct: 239 ---VSSFSGFMQKDDKENVKIERRQLMHCVVKAIDKTRAIVHLSSDEDLLCKSIIKDLKG 295 Query: 269 AIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVV 328 G + RV ++ + G + G V + + + + + + V Sbjct: 296 LSIDHLIPGMMVNARVHSVLENGVMLSFLTYFSGTVDIFNLLNSFPSGNWKDDYSKNKKV 355 Query: 329 EVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSI-TDFGIFIGLDGGI 387 +L +D R + L L + + + K+ + G+F+ + Sbjct: 356 NARILFVDPSTRAVGLTLNKHLLHLEVPPINLKAGDIYDKSKVLRVDKKAGLFLEIPSPT 415 Query: 388 --DGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWV 445 G + + D+S A + ++K+G + +L V VK A + Sbjct: 416 PSPGFISIHDVSDKDAKN--LEKFKEGSSLRVRILGVRNLEGVAIGTVKDSAFEGSVFTH 473 Query: 446 ALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASR-DRVEDATLVLSVGDEVEAK 504 K G +V KV V+ GA V+ + GV+ S + V VG E+ + Sbjct: 474 DDVKPGMLVRAKVATVEPFGAIVQFSSGVKALCPLPHMSELEHVVKPPKKFKVGAELLFR 533 Query: 505 FTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFK 552 G K++ ++++ + + D +A+ + ++ + + K Sbjct: 534 VLGC--KSKRVTVTYKKSLVKSKLDVLASYADAKIGLVTHGWITKIEK 579 Score = 64.6 bits (156), Expect = 9e-09, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 66/182 (36%), Gaps = 10/182 (5%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQ 57 + + A K + PG+ ++G V ++ + E+ I + Sbjct: 1292 LVDDLATCTSRIEKIKDLLPGTEIKGYVKNVNSKGCFIMISRMVEARITLSNLSDEYVEN 1351 Query: 58 GELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYED---AETVTGVING 114 + + VG V + + + G S K + + +Y D + + G + Sbjct: 1352 PQKDFPVGMLVHGRVLSTDPSSGRVEASLRKTTGSKLEKLDDISYSDLHVGDIIDGQVKR 1411 Query: 115 KVKGGFTVEL--NGIRAFLPGSLVDVRPVRDTL--HLEGKELEFKVIKLDQKRNNVVVSR 170 G V + + + S + PV D + G ++ K++K+D+KR+ V + Sbjct: 1412 VESFGLFVTIRRSELVGLCHVSELSDEPVVDINSCYKAGDMVKAKILKIDEKRHRVSLGM 1471 Query: 171 RA 172 + Sbjct: 1472 KK 1473 Score = 41.5 bits (96), Expect = 0.090, Method: Composition-based stats. Identities = 15/101 (14%), Positives = 32/101 (31%), Gaps = 6/101 (5%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSE--SAIPAEQFKNA---QGELEIQVG 65 + + + G I+ G V ++ + V +SE + + + G Sbjct: 1392 DDISYSDLHVGDIIDGQVKRVESFGLFVTI-RRSELVGLCHVSELSDEPVVDINSCYKAG 1450 Query: 66 DEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAE 106 D V + +++ L +K+ ED E Sbjct: 1451 DMVKAKILKIDEKRHRVSLGMKKSYFDSDLTADTNDDEDDE 1491 >UniRef50_Q05022 rRNA biogenesis protein RRP5 n=10 Tax=Saccharomycetaceae RepID=RRP5_YEAST Length = 1729 Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 106/577 (18%), Positives = 221/577 (38%), Gaps = 64/577 (11%) Query: 28 VVAIDKDVVLVDAGLKSESAIPAEQF---KNAQGELEIQVGDEVDVALDAVEDGFGETLL 84 + +I + V K + ++ + V V L +D + LL Sbjct: 801 IKSISDKGLFVAFNGKFIGLVLPSYAVDSRDIDISKAFYINQSVTVYLLRTDDKNQKFLL 860 Query: 85 SREKAKRHEAWITLEKAYED--------------AETVTGVINGKVKGGFTV-------- 122 S + K E +E ED V I K V Sbjct: 861 SLKAPKVKEEKKKVESNIEDPVDSSIKSWDDLSIGSIVKAKIKSVKKNQLNVILAANLHG 920 Query: 123 ELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLD--QKRNNVVVSRR--------- 171 ++ F + + + + + ++ K+I + + ++ + Sbjct: 921 RVDIAEVFDTYEEITDKKQPLSNYKKDDVIKVKIIGNHDVKSHKFLPITHKISKASVLEL 980 Query: 172 --AVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWK-- 226 E ++ + LE + G E+ G V N + ++ + V + + D+A Sbjct: 981 SMKPSELKSKEVHTKSLEEINIGQELTGFVNNSSGNHLWLTISPVLKARISLLDLADNDS 1040 Query: 227 -RVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVT 285 ++ + +G + VKV DRE V+ +G+ G +L GRV Sbjct: 1041 NFSENIESVFPLGSALQVKVASIDREHGFVN----AIGKSHVDINMSTIKVGDELPGRVL 1096 Query: 286 NLTDYGCFVEIEEGVEGLVHVSE-MDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISL 344 + + +++ V G+ +++ ++ + + + + +V+ VL +DE+ ++I L Sbjct: 1097 KIAEKYVLLDLGNKVTGISFITDALNDFSLTLKEAFEDKINNVIPTTVLSVDEQNKKIEL 1156 Query: 345 GLKQCKANPWQQFA-ETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGE 403 L+ A + E +G+ V+G +K++ D GIF+ L ++ V +S +S + + Sbjct: 1157 SLRPATAKTRSIKSHEDLKQGEIVDGIVKNVNDKGIFVYLSRKVEAFVPVSKLSDSYL-K 1215 Query: 404 EAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALN---KKGAIVTGKVTA 460 E + YK + V+ D E RISL +++ + + K G + G + + Sbjct: 1216 EWKKFYKPMQYVLGKVVTCD-EDSRISLTLRESEINGDLKVLKTYSDIKAGDVFEGTIKS 1274 Query: 461 VDAKGATVELAD--GVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLS 518 V G V+L + V G +E + + ED + + VGD V+A + + + ISLS Sbjct: 1275 VTDFGVFVKLDNTVNVTGLAHITEIADKKPEDLSALFGVGDRVKAIVLKTNPEKKQISLS 1334 Query: 519 VRAKDEADEKD---------AIATVNKQEDANFSNNA 546 ++A + E + + + K+++ +A Sbjct: 1335 LKASHFSKEAELASTTTTTTTVDQLEKEDEDEVMADA 1371 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 101/458 (22%), Positives = 181/458 (39%), Gaps = 50/458 (10%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE--------IQVGDEV 68 + GSIV+ + ++ K+ + V + + + E+ + D + Sbjct: 891 DLSIGSIVKAKIKSVKKNQLNVILAANLHGRVDIAEVFDTYEEITDKKQPLSNYKKDDVI 950 Query: 69 DVALDAVEDGFGETLLSREKAKRHEAWITLEKA---YEDAETVTGVINGKVKG----GFT 121 V + D L + + L + E T + G GF Sbjct: 951 KVKIIGNHDVKSHKFLPITHKISKASVLELSMKPSELKSKEVHTKSLEEINIGQELTGFV 1010 Query: 122 VELNGIRAFLPGSLV-------------DVRPVRDTLHL--EGKELEFKVIKLDQKRNNV 166 +G +L S V D + + G L+ KV +D++ V Sbjct: 1011 NNSSGNHLWLTISPVLKARISLLDLADNDSNFSENIESVFPLGSALQVKVASIDREHGFV 1070 Query: 167 VVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAW 225 ++ ++ + ++ G E+ G V + + +DLG V G+ ITD Sbjct: 1071 NAIGKSHVDIN--------MSTIKVGDELPGRVLKIAEKYVLLDLGNKVTGISFITDALN 1122 Query: 226 KRVKHPSEIV--NVGDEITVKVLKFDRERTRVSLGLK-QLGEDPWVAIAKRYPEGTKLTG 282 E + + I VL D + ++ L L+ + + + +G + G Sbjct: 1123 DFSLTLKEAFEDKINNVIPTTVLSVDEQNKKIELSLRPATAKTRSIKSHEDLKQGEIVDG 1182 Query: 283 RVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRI 342 V N+ D G FV + VE V VS++ + K V V+ D E RI Sbjct: 1183 IVKNVNDKGIFVYLSRKVEAFVPVSKLSDSY-LKEWKKFYKPMQYVLGKVVTCD-EDSRI 1240 Query: 343 SLGLKQCKANPWQQFAETH---NKGDRVEGKIKSITDFGIFIGLDG--GIDGLVHLSDIS 397 SL L++ + N + +T+ GD EG IKS+TDFG+F+ LD + GL H+++I+ Sbjct: 1241 SLTLRESEINGDLKVLKTYSDIKAGDVFEGTIKSVTDFGVFVKLDNTVNVTGLAHITEIA 1300 Query: 398 WNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQ 435 + E+ + GD + A+VL+ + E+++ISL +K Sbjct: 1301 -DKKPEDLSALFGVGDRVKAIVLKTNPEKKQISLSLKA 1337 Score = 151 bits (381), Expect = 8e-35, Method: Composition-based stats. Identities = 60/260 (23%), Positives = 113/260 (43%), Gaps = 13/260 (5%) Query: 13 LKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA-----QGELEIQVGDE 67 + + G + G V+ I + VL+D G K N + E ++ + Sbjct: 1080 INMSTIKVGDELPGRVLKIAEKYVLLDLGNKVTGISFITDALNDFSLTLKEAFEDKINNV 1139 Query: 68 VDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-G 126 + + +V++ + LS A I + + E V G++ G V L+ Sbjct: 1140 IPTTVLSVDEQNKKIELSLRPATAKTRSIKSHEDLKQGEIVDGIVKNVNDKGIFVYLSRK 1199 Query: 127 IRAFLPGSLVDVRPVRDTLHLEG--KELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQ 184 + AF+P S + +++ + + KV+ D+ + R + E + + Sbjct: 1200 VEAFVPVSKLSDSYLKEWKKFYKPMQYVLGKVVTCDEDSRISLTLRES--EINGDLKVLK 1257 Query: 185 LLENLQEGMEVKGIVKNLTDYGAFVDLG---GVDGLLHITDMAWKRVKHPSEIVNVGDEI 241 +++ G +G +K++TD+G FV L V GL HIT++A K+ + S + VGD + Sbjct: 1258 TYSDIKAGDVFEGTIKSVTDFGVFVKLDNTVNVTGLAHITEIADKKPEDLSALFGVGDRV 1317 Query: 242 TVKVLKFDRERTRVSLGLKQ 261 VLK + E+ ++SL LK Sbjct: 1318 KAIVLKTNPEKKQISLSLKA 1337 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 87/542 (16%), Positives = 188/542 (34%), Gaps = 54/542 (9%) Query: 20 PGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQ---FKNAQGELEIQVGDEVDVALDA-V 75 PG IV + +I K+ + + F + + +G + + A + Sbjct: 337 PGQIVDLLCESITKNGIAGKVFGLVSGVVNVSHLRTFSEEDLKHKFVIGSSIRCRIIACL 396 Query: 76 EDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRA----FL 131 E+ G+ +L + LE A E + G+T E I+ +L Sbjct: 397 ENKSGDKVLILSNLPHI---LKLEDALRSTEGLDAFPI-----GYTFESCSIKGRDSEYL 448 Query: 132 PGSLVDVRPVRDTLHLEGK-----ELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLL 186 +L D R + G+ L +V+ + +S + + + Sbjct: 449 YLALDDDRLGKVHSSRVGEIENSENLSSRVLGYSPVDDIYQLS----TDPKYLKLKYLRT 504 Query: 187 ENLQEGMEV-KGIVKNLTDYGAFVDL--GGVDGLLHITDMAWKRVKHPSEIVNVGDEITV 243 ++ G + + +++ G + + G + ++ R+ +P +G ++ Sbjct: 505 NDIPIGELLPSCEITSVSSSGIELKIFNGQFKASVPPLHISDTRLVYPERKFKIGSKVKG 564 Query: 244 KVLKFDRERTRVSLGLKQLGED----------PWVAIAKRYPEGTKLTGRVTNLTDYGCF 293 +V+ + R V + LK+ + + + K + GC Sbjct: 565 RVISVNS-RGNVHVTLKKSLVNIEDNELPLVSTYENAKNIKEKNEKTLATIQVFKPNGCI 623 Query: 294 VEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLK---QCK 350 + G+ G + SE+ P + + +G V V +LD+D +RRRI K + Sbjct: 624 ISFFGGLSGFLPNSEIS-EVFVKRPEEHLRLGQTVIVKLLDVDADRRRIIATCKVSNEQA 682 Query: 351 ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDG-GIDGLVHLSDISWNVAGEEA--VR 407 A + + T + + + G+ G++++ +S + + ++ Sbjct: 683 AQQKDTIENIVPGRTIITVHVIEKTKDSVIVEIPDVGLRGVIYVGHLSDSRIEQNRAQLK 742 Query: 408 EYKKGDEIAAVVLQVDAERERISLGVKQ-LAEDPFN-------NWVALNKKGAIVTGKVT 459 + + G E+ +V+ D ++ +K L +D + V K + + Sbjct: 743 KLRIGTELTGLVIDKDTRTRVFNMSLKSSLIKDAKKETLPLTYDDVKDLNKDVPMHAYIK 802 Query: 460 AVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSV 519 ++ KG V G + S A R D + + V D KN+ LS+ Sbjct: 803 SISDKGLFVAFNGKFIGLVLPSYAVDSRDIDISKAFYINQSVTVYLLRTDDKNQKFLLSL 862 Query: 520 RA 521 +A Sbjct: 863 KA 864 Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats. Identities = 91/551 (16%), Positives = 189/551 (34%), Gaps = 44/551 (7%) Query: 24 VRGVVVAIDKDVVLVDAGL-KSESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGFGET 82 ++ V +I+ +D GL I + F N + L G + D Sbjct: 259 IQCAVKSIEDHGATLDVGLPGFTGFIAKKDFGNFEKLLP---GAVFLGNITKKSDRSIVV 315 Query: 83 LLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNG-IRAFLPGSLVDVRPV 141 K I+ A + V + K G ++ G + + S + Sbjct: 316 NTDFSDKKNKITQISSIDAIIPGQIVDLLCESITKNGIAGKVFGLVSGVVNVSHLRTFSE 375 Query: 142 RDTLH--LEGKELEFKVIKLDQKRNN----VVVSRRAVIESENSAERDQLLENLQEGMEV 195 D H + G + ++I + ++ ++ + +++ E++ + L+ G Sbjct: 376 EDLKHKFVIGSSIRCRIIACLENKSGDKVLILSNLPHILKLEDALRSTEGLDAFPIGYTF 435 Query: 196 K-GIVKNLTDYGAFVDLGGVD-GLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERT 253 + +K ++ L G +H + RV + ++ +VL + Sbjct: 436 ESCSIKGRDSEYLYLALDDDRLGKVHSS-----RVGEIENS----ENLSSRVLGYSPVDD 486 Query: 254 RVSLGLKQLGEDPWVAIAKRYPEGTK-LTGRVTNLTDYGCFVEIEEGV-EGLVHVSEMDW 311 L P G + +T+++ G ++I G + V + Sbjct: 487 IYQLSTDPKYLKLKYLRTNDIPIGELLPSCEITSVSSSGIELKIFNGQFKASVPPLHISD 546 Query: 312 TNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN----------PWQQFAETH 361 T + ++P + +G V+ V+ ++ R + + LK+ N ++ Sbjct: 547 T-RLVYPERKFKIGSKVKGRVISVN-SRGNVHVTLKKSLVNIEDNELPLVSTYENAKNIK 604 Query: 362 NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQ 421 K ++ I+ G I GG+ G + S+IS V + + G + +L Sbjct: 605 EKNEKTLATIQVFKPNGCIISFFGGLSGFLPNSEIS-EVFVKRPEEHLRLGQTVIVKLLD 663 Query: 422 VDAERERISLGVKQLAEDP---FNNWVALNKKGAIVTGKVTAVDAKGATVELAD-GVEGY 477 VDA+R RI K E + + I+T V VE+ D G+ G Sbjct: 664 VDADRRRIIATCKVSNEQAAQQKDTIENIVPGRTIITVHVIEKTKDSVIVEIPDVGLRGV 723 Query: 478 LRASEASRDRVEDAT---LVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATV 534 + S R+E L +G E+ D + R ++S+++ D K + Sbjct: 724 IYVGHLSDSRIEQNRAQLKKLRIGTELTGLVIDKDTRTRVFNMSLKSSLIKDAKKETLPL 783 Query: 535 NKQEDANFSNN 545 + + + + Sbjct: 784 TYDDVKDLNKD 794 Score = 99.6 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 77/503 (15%), Positives = 161/503 (32%), Gaps = 48/503 (9%) Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGV-----INGKV 116 +G + ++ T S++K + Y D + V + Sbjct: 208 FHIGQWLRCSVIKNTSLEPSTKKSKKKRIELTIEPSSVNIYADEDLVKSTSIQCAVKSIE 267 Query: 117 KGGFTVELN--GIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVI 174 G T+++ G F+ D L G + K K + +V Sbjct: 268 DHGATLDVGLPGFTGFIAKK--DFGNFEKL--LPGAVFLGNITK---KSDRSIVVNTDFS 320 Query: 175 ESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSE 233 + +N + ++ + G V + +++T G + G V G+++++ + + Sbjct: 321 DKKNKITQISSIDAIIPGQIVDLLCESITKNGIAGKVFGLVSGVVNVSHLRTFSEEDLKH 380 Query: 234 IVNVGDEITVKVLKFDRER---TRVSLG-----LKQLGEDPWVAIAKRYPEGTKLT-GRV 284 +G I +++ + + L LK +P G + Sbjct: 381 KFVIGSSIRCRIIACLENKSGDKVLILSNLPHILKLEDALRSTEGLDAFPIGYTFESCSI 440 Query: 285 TNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISL 344 ++ +++ G VH S + + + + VL L Sbjct: 441 KGRDSEYLYLALDDDRLGKVHSSRVG----------EIENSENLSSRVLGYSPVDDIYQL 490 Query: 345 GLKQCKANPWQQFAETHNKGDRVE-GKIKSITDFGIFIGLDGG-IDGLVHLSDISWNVAG 402 G+ + +I S++ GI + + G V IS Sbjct: 491 STDPKYLKLKYLRTNDIPIGELLPSCEITSVSSSGIELKIFNGQFKASVPPLHISDTRLV 550 Query: 403 EEAVREYKKGDEIAAVVLQVD-AERERISL--GVKQLAEDP------FNNWVALNKKGAI 453 R++K G ++ V+ V+ ++L + + ++ + N + +K Sbjct: 551 Y-PERKFKIGSKVKGRVISVNSRGNVHVTLKKSLVNIEDNELPLVSTYENAKNIKEKNEK 609 Query: 454 VTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNR 513 + G + G+ G+L SE S V+ L +G V K VD R Sbjct: 610 TLATIQVFKPNGCIISFFGGLSGFLPNSEISEVFVKRPEEHLRLGQTVIVKLLDVDADRR 669 Query: 514 AISLSVRAKDE--ADEKDAIATV 534 I + + +E A +KD I + Sbjct: 670 RIIATCKVSNEQAAQQKDTIENI 692 Score = 63.1 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 26/177 (14%), Positives = 66/177 (37%), Gaps = 11/177 (6%) Query: 14 KEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA---QGELEIQVGDEVDV 70 + + G IV G+V ++ + V K E+ +P + ++ + + + V Sbjct: 1170 SHEDLKQGEIVDGIVKNVNDKGIFVYLSRKVEAFVPVSKLSDSYLKEWKKFYKPMQYVLG 1229 Query: 71 ALDAVEDGFGETLLSREKAKRHEAWITLEKA--YEDAETVTGVINGKVKGGFTVELN--- 125 + D L+ +++ + L+ + + G I G V+L+ Sbjct: 1230 KVV-TCDEDSRISLTLRESEINGDLKVLKTYSDIKAGDVFEGTIKSVTDFGVFVKLDNTV 1288 Query: 126 GIRAFLPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 + + + + D L G ++ V+K + ++ + +S +A S+ + Sbjct: 1289 NVTGLAHITEIADKKPEDLSALFGVGDRVKAIVLKTNPEKKQISLSLKASHFSKEAE 1345 >UniRef50_Q46GP7 SSU ribosomal protein S1P n=24 Tax=cellular organisms RepID=Q46GP7_PROMT Length = 431 Score = 195 bits (495), Expect = 4e-48, Method: Composition-based stats. Identities = 58/259 (22%), Positives = 113/259 (43%), Gaps = 12/259 (4%) Query: 21 GSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQGELEIQVGDEVDVALDAVED 77 G I +G V+A++ D + VD G K+ +P + + G +V+V + ++ Sbjct: 149 GEIAKGSVIAVESDGIYVDIGGKAPGFMPKNECGLGVITNLKERFPKGLKVEVLVTREQN 208 Query: 78 GFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVD 137 G +S + ++W ++ ++ + + ING +GG T + G+R F+P S ++ Sbjct: 209 ADGMVTISCRALELRKSWDKVQNLAKEGKVIRVKINGFNRGGVTCDFEGLRGFIPRSQLE 268 Query: 138 VRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKG 197 + L K + ++++ +R +V+S + + L+ G ++G Sbjct: 269 --DGENHQSLVSKTISTAFLEVNPERRKLVLSEKKAAIASR-------FSELEIGQLIEG 319 Query: 198 IVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSL 257 + + YG FVDL GV GLLH + + ++ E+ G+ I + D R R+ L Sbjct: 320 EILTIKPYGFFVDLRGVSGLLHHSMVTNGSMRSLREVFQPGESIKALITDLDPSRGRIGL 379 Query: 258 GLKQLGEDPWVAIAKRYPE 276 L P I + Sbjct: 380 NTALLEGPPGELITDKTKV 398 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 51/282 (18%), Positives = 101/282 (35%), Gaps = 12/282 (4%) Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDID 336 G G V + G +V+I G + +E + + G VEV+V Sbjct: 149 GEIAKGSVIAVESDGIYVDIGGKAPGFMPKNECGLGV-ITNLKERFPKGLKVEVLVTREQ 207 Query: 337 EERRRISLGLKQCK-ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSD 395 +++ + + W + +G + KI G+ + G+ G + S Sbjct: 208 NADGMVTISCRALELRKSWDKVQNLAKEGKVIRVKINGFNRGGVTCDFE-GLRGFIPRSQ 266 Query: 396 ISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVT 455 + + V + I+ L+V+ ER ++ L K+ A + + + G ++ Sbjct: 267 LEDGENHQSLVSK-----TISTAFLEVNPERRKLVLSEKKAA---IASRFSELEIGQLIE 318 Query: 456 GKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAI 515 G++ + G V+L GV G L S + + V G+ ++A T +D I Sbjct: 319 GEILTIKPYGFFVDL-RGVSGLLHHSMVTNGSMRSLREVFQPGESIKALITDLDPSRGRI 377 Query: 516 SLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAAKGE 557 L+ + + E+AN + K + Sbjct: 378 GLNTALLEGPPGELITDKTKVMEEANERAIKARNSLNKEKVD 419 Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats. Identities = 52/274 (18%), Positives = 100/274 (36%), Gaps = 15/274 (5%) Query: 93 EAWITLEKAYEDAETVTGVINGKVKGGFTVELNG-IRAFLPGSLVDVRPVRDTLH--LEG 149 A + E G + G V++ G F+P + + + + +G Sbjct: 137 AALEENQPIGTTGEIAKGSVIAVESDGIYVDIGGKAPGFMPKNECGLGVITNLKERFPKG 196 Query: 150 KELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFV 209 ++E V + V +S RA+ E D++ +EG ++ + G Sbjct: 197 LKVEVLVTREQNADGMVTISCRAL---ELRKSWDKVQNLAKEGKVIRVKINGFNRGGVTC 253 Query: 210 DLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVA 269 D G+ G + + + V I+ L+ + ER ++ L K+ + Sbjct: 254 DFEGLRGFIPRSQLEDGENHQSL----VSKTISTAFLEVNPERRKLVLSEKKAA---IAS 306 Query: 270 IAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVE 329 G + G + + YG FV++ GV GL+H S M +V G+ ++ Sbjct: 307 RFSELEIGQLIEGEILTIKPYGFFVDL-RGVSGLLHHS-MVTNGSMRSLREVFQPGESIK 364 Query: 330 VMVLDIDEERRRISLGLKQCKANPWQQFAETHNK 363 ++ D+D R RI L + P + + Sbjct: 365 ALITDLDPSRGRIGLNTALLEGPPGELITDKTKV 398 >UniRef50_A5DPT1 Putative uncharacterized protein n=2 Tax=Pichia guilliermondii RepID=A5DPT1_PICGU Length = 1674 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 102/566 (18%), Positives = 219/566 (38%), Gaps = 48/566 (8%) Query: 22 SIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQ---VGDEVDVALDAVEDG 78 ++ G + ++ + V G K + A+ E ++ V + +++ Sbjct: 759 KVLTGYIKSVTNLGLFVAFGGKLTGLVLAKYATKNPNEDILKRFYKNQSVSCRVIRLDNE 818 Query: 79 FGETLLSREKAKRHE----------AWITLEKAYEDAETVTGVINGKVKGGFTVEL-NGI 127 LLS + + E + L Y I V+L + + Sbjct: 819 NKRFLLSLDSEDKSEHGQELVNPVDSTKKLITDYTPGAKTQAKIKSIKGTQLNVQLADNL 878 Query: 128 RA-------FLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSR-----RAVIE 175 + F S + + + + + L +V+ +N+ + + I Sbjct: 879 QGRLDITQCFEKWSDIKDKNQPLSQFHKDEILSVRVLGYHDAKNHTFLPISHRKSKNTIL 938 Query: 176 SENSAERDQL--LENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAW--KRVKH 230 E+D + +++++ G E V NL +V + V G + D++ + Sbjct: 939 ELTLLEKDPITEIKDVKVGSEHVAFVNNLARGFVWVSMSLSVKGRVSFMDLSDEVSIFED 998 Query: 231 PSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDY 290 + +G I KV + D E + L ++ + + + RV + Sbjct: 999 LENRLPIGAAIKAKVKQIDEEHKNIILTSRKHTVTKFEDV----ELNKQYPARVLKVLPS 1054 Query: 291 GCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCK 350 VE+ V ++++ + + ++V + D VL +D++ ++IS+ L+ K Sbjct: 1055 FVLVELAHDVVASSYITD-ALNDYSSALNEVFHANDYTTATVLAVDKDSKKISVSLRTNK 1113 Query: 351 A-NPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREY 409 A + E +GD V+G +K++ + G+++ L + GLV +SD+S + ++ + + Sbjct: 1114 AVDKVINSVEDLQRGDVVKGFVKNVANNGVYVSLGRSVHGLVRVSDLSDSYL-KDWKKYF 1172 Query: 410 KKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNK---KGAIVTGKVTAVDAKGA 466 K+ + V+ E R+ + +K+ + N + + +G + G V V G Sbjct: 1173 KQHQPVVGKVVNC-KEEGRVLITLKESEVNGELNVLKKFEDLKEGEVYEGSVRQVTDFGV 1231 Query: 467 TVELAD--GVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDE 524 V+L V G SE + ++ D + GD V+ K G++ + + +SL ++ Sbjct: 1232 FVKLDGTLNVSGLCHHSEVADNKDVDVKALFGEGDRVKVKILGINSEKKQLSLGMKVSYF 1291 Query: 525 ADEKDAIATVNKQEDANFSNNAMAEA 550 A E AT N+ D + EA Sbjct: 1292 APE----ATQNEDSDDDVEMAESEEA 1313 Score = 177 bits (450), Expect = 9e-43, Method: Composition-based stats. Identities = 109/569 (19%), Positives = 213/569 (37%), Gaps = 51/569 (8%) Query: 22 SIVRGVVV--AIDKDVVLVDA-GLKSESAIPAEQFKNAQGE------LEIQVGDEVDVAL 72 +IV +V + DKD V+V+ G I A Q + E +IQ GD+++ + Sbjct: 661 TIVEASIVEKSKDKDSVIVEIEGSNLRGVIYAGQLSDGNYEQTRALYKKIQAGDKLEAVV 720 Query: 73 DAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETV-----TGVINGKVKGGFTVELNG- 126 + +LS +++ + A + TV TG I G V G Sbjct: 721 LERDMKTRSVILSAKQSFINGAKNNQIPSQFSDVTVSDKVLTGYIKSVTNLGLFVAFGGK 780 Query: 127 IRAFLPGSLVDVRPVRDTLH--LEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER-- 182 + + P D L + + + +VI+LD + ++S + +SE+ E Sbjct: 781 LTGLVLAKYATKNPNEDILKRFYKNQSVSCRVIRLDNENKRFLLSLDSEDKSEHGQELVN 840 Query: 183 -----DQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDM--AWKRVKH---P 231 +L+ + G + + +K++ V L + G L IT W +K P Sbjct: 841 PVDSTKKLITDYTPGAKTQAKIKSIKGTQLNVQLADNLQGRLDITQCFEKWSDIKDKNQP 900 Query: 232 SEIVNVGDEITVKVLKFDRERTRVSL--GLKQ----------LGEDPWVAIAKRYPEGTK 279 + + ++V+VL + + L ++ L +DP I K G++ Sbjct: 901 LSQFHKDEILSVRVLGYHDAKNHTFLPISHRKSKNTILELTLLEKDPITEI-KDVKVGSE 959 Query: 280 LTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNI-HPSKVVNVGDVVEVMVLDIDEE 338 V NL +V + V+G V ++ + +G ++ V IDEE Sbjct: 960 HVAFVNNLARGFVWVSMSLSVKGRVSFMDLSDEVSIFEDLENRLPIGAAIKAKVKQIDEE 1019 Query: 339 RRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISW 398 + I L ++ + E + ++ + + + L + +++D + Sbjct: 1020 HKNIILTSRKHTVTKF----EDVELNKQYPARVLKVLPSFVLVELAHDVVASSYITD-AL 1074 Query: 399 NVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQ-LAEDPFNNWVALNKKGAIVTGK 457 N + D A VL VD + ++IS+ ++ A D N V ++G +V G Sbjct: 1075 NDYSSALNEVFHANDYTTATVLAVDKDSKKISVSLRTNKAVDKVINSVEDLQRGDVVKGF 1134 Query: 458 VTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISL 517 V V G V L V G +R S+ S ++D V K ++ + + Sbjct: 1135 VKNVANNGVYVSLGRSVHGLVRVSDLSDSYLKDWKKYFKQHQPVVGKVVNC-KEEGRVLI 1193 Query: 518 SVRAKDEADEKDAIATVNKQEDANFSNNA 546 +++ + E + + ++ + Sbjct: 1194 TLKESEVNGELNVLKKFEDLKEGEVYEGS 1222 Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats. Identities = 96/539 (17%), Positives = 202/539 (37%), Gaps = 36/539 (6%) Query: 18 TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAE---QFKNAQGELEIQVGDEVDVALDA 74 +PG IV +V I K+ + + I ++ + +G+ + + A Sbjct: 301 IQPGIIVDALVAEITKEGITTKVFGMVDGTISLSNIGEYDLDSLNHKFTIGNSIKARVIA 360 Query: 75 V--EDGFGETLLSREKAKRHEAWITLEKAYEDAET------VTGVINGKVKGGFTVELNG 126 V + G + +LS A E V + + + Sbjct: 361 VLLKGGTKKLVLSILPRILSLDSQENTDALEAFPIGFVFDQVEVIGLDSNYIFVSTGTSS 420 Query: 127 IRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLL 186 + S ++ V D + G + + +VI L++ + ++ ++ + + + Sbjct: 421 YHGQVHISKINQEKVID-DYFVGSKHKARVIGLNKFEGLLTLT----MDPKIIDTKFMVP 475 Query: 187 ENLQEGMEVKG-IVKNLTDYGAFVDL---GGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 + G + G + + GA + + D + M+ R+ +P VG +I Sbjct: 476 SQIPVGEYINGGEIIKVLPDGAGIQVKIFNDFDAFVPPEHMSDVRLVYPERKYKVGSKIK 535 Query: 243 VKVLKFDRERTRVSL--GLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV 300 +VLK + ++L L + +D ++ + G K V G V + Sbjct: 536 GRVLKVHGSKIFITLKKTLVNIEDDEVLSNFESAEIGLKTPATVEKFVHNGAIVSFFGNL 595 Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAET 360 + +E+ T + G V V ++D DE ++R+ + LKQ QQ A + Sbjct: 596 RAFLPKNEISETF-VKDAKDFLKKGQTVNVRIMDRDETQQRLIVTLKQNDVTKAQQSAVS 654 Query: 361 HNK--GDRVEGKI--KSITDFGIFIGLDG-GIDGLVHLSDISWN--VAGEEAVREYKKGD 413 VE I KS + + ++G + G+++ +S ++ + GD Sbjct: 655 SVVPGKTIVEASIVEKSKDKDSVIVEIEGSNLRGVIYAGQLSDGNYEQTRALYKKIQAGD 714 Query: 414 EIAAVVLQVDAERERISLGVKQLAEDPFNN------WVALNKKGAIVTGKVTAVDAKGAT 467 ++ AVVL+ D + + L KQ + N + + ++TG + +V G Sbjct: 715 KLEAVVLERDMKTRSVILSAKQSFINGAKNNQIPSQFSDVTVSDKVLTGYIKSVTNLGLF 774 Query: 468 VELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEAD 526 V + G + A A+++ ED V + +D +N+ LS+ ++D+++ Sbjct: 775 VAFGGKLTGLVLAKYATKNPNEDILKRFYKNQSVSCRVIRLDNENKRFLLSLDSEDKSE 833 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 98/545 (17%), Positives = 206/545 (37%), Gaps = 42/545 (7%) Query: 10 EESLKEIETRPGSIVRGVVVAIDKDVVLVDAG-LKSESAIPAEQFKNAQGEL-EIQVGDE 67 ES+++ + PG++++ VV+++ V+++ G I ++ NA +L + G Sbjct: 203 NESIEDEDLIPGNLLQCSVVSVEDRGVILNTGVSGKSGFISNKELSNANIDLQSLSEG-- 260 Query: 68 VDVALDAVEDGFGETLLSREKAKRHEAWIT-------LEKAYEDAETVTGVINGKVKGGF 120 V + ++ +S A + A + V ++ K G Sbjct: 261 -YVMMTSIAAKPTTRTISLRPATSSVSSKKNKVSNISSVDAIQPGIIVDALVAEITKEGI 319 Query: 121 TVELNG-IRAFLPGSLVDVRPVRDTLH--LEGKELEFKVIKL--DQKRNNVVVSRRAVIE 175 T ++ G + + S + + H G ++ +VI + +V+S I Sbjct: 320 TTKVFGMVDGTISLSNIGEYDLDSLNHKFTIGNSIKARVIAVLLKGGTKKLVLSILPRIL 379 Query: 176 SENSAERDQLLENLQEGMEVKGI-VKNLTDYGAFVDLG--GVDGLLHITDMAWKRVKHPS 232 S +S E LE G + V L FV G G +HI+ + ++V Sbjct: 380 SLDSQENTDALEAFPIGFVFDQVEVIGLDSNYIFVSTGTSSYHGQVHISKINQEKVI--- 436 Query: 233 EIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEG-TKLTGRVTNLTDYG 291 + VG + +V+ ++ ++L + D + + P G G + + G Sbjct: 437 DDYFVGSKHKARVIGLNKFEGLLTLTMDPKIIDTKFMVPSQIPVGEYINGGEIIKVLPDG 496 Query: 292 CF--VEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC 349 V+I + V M + ++P + VG ++ VL + +I + LK+ Sbjct: 497 AGIQVKIFNDFDAFVPPEHMS-DVRLVYPERKYKVGSKIKGRVLKVH--GSKIFITLKKT 553 Query: 350 ----KANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEA 405 + + E+ G + ++ G + G + + ++IS ++A Sbjct: 554 LVNIEDDEVLSNFESAEIGLKTPATVEKFVHNGAIVSFFGNLRAFLPKNEISETFV-KDA 612 Query: 406 VREYKKGDEIAAVVLQVDAERERISLGVKQ--LAEDPFNNWVALNKKGAIVTGKV--TAV 461 KKG + ++ D ++R+ + +KQ + + + ++ IV + + Sbjct: 613 KDFLKKGQTVNVRIMDRDETQQRLIVTLKQNDVTKAQQSAVSSVVPGKTIVEASIVEKSK 672 Query: 462 DAKGATVELAD-GVEGYLRASEASRDRVEDATLVLSV---GDEVEAKFTGVDRKNRAISL 517 D VE+ + G + A + S E + GD++EA D K R++ L Sbjct: 673 DKDSVIVEIEGSNLRGVIYAGQLSDGNYEQTRALYKKIQAGDKLEAVVLERDMKTRSVIL 732 Query: 518 SVRAK 522 S + Sbjct: 733 SAKQS 737 Score = 61.1 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 49/326 (15%), Positives = 110/326 (33%), Gaps = 64/326 (19%) Query: 256 SLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWT--- 312 SL K+L GT + G+++ + + I + + G V +S + Sbjct: 85 SLSFKKLFP------------GTTVLGQISKVNKLDLEIAIGDNLIGYVPISSISDEITR 132 Query: 313 ----------------------------NKNIHPSKVVNVGDVVEVMVLDIDE---ERRR 341 N+ + G+ + V + + +++R Sbjct: 133 KVELYQQESDSSEDEEEEGVTRTATMKDNELPDLQSIFKAGEWLRAKVTEAELSQSKKKR 192 Query: 342 ISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLD-GGIDGLVHLSDISWNV 400 I ++ N + E G+ ++ + S+ D G+ + G G + ++S Sbjct: 193 IQFTIEPENVNESIED-EDLIPGNLLQCSVVSVEDRGVILNTGVSGKSGFISNKELSNAN 251 Query: 401 AGEEAVREYKKGDEIAAVVLQVDAERERISL----GVKQLAEDPFNNW--VALNKKGAIV 454 +++ E + + ISL ++ +N V + G IV Sbjct: 252 IDLQSLSE----GYVMMTSIAAKPTTRTISLRPATSSVSSKKNKVSNISSVDAIQPGIIV 307 Query: 455 TGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRK--N 512 V + +G T ++ V+G + S ++ ++G+ ++A+ V K Sbjct: 308 DALVAEITKEGITTKVFGMVDGTISLSNIGEYDLDSLNHKFTIGNSIKARVIAVLLKGGT 367 Query: 513 RAISLSVRA----KDEADEKDAIATV 534 + + LS+ D + DA+ Sbjct: 368 KKLVLSILPRILSLDSQENTDALEAF 393 Score = 60.7 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 26/189 (13%), Positives = 72/189 (38%), Gaps = 21/189 (11%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ--------GELEIQVGDEV 68 + + G +V+G V + + V V G + ++ + + VG V Sbjct: 1124 DLQRGDVVKGFVKNVANNGVYVSLGRSVHGLVRVSDLSDSYLKDWKKYFKQHQPVVGKVV 1183 Query: 69 DVALDAVEDGFGETLLSREKAKRHEAWITLE--KAYEDAETVTGVINGKVKGGFTVELNG 126 + G L++ ++++ + L+ + ++ E G + G V+L+G Sbjct: 1184 NCK------EEGRVLITLKESEVNGELNVLKKFEDLKEGEVYEGSVRQVTDFGVFVKLDG 1237 Query: 127 ---IRAFLPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 + S V D L EG ++ K++ ++ ++ + + + + + + Sbjct: 1238 TLNVSGLCHHSEVADNKDVDVKALFGEGDRVKVKILGINSEKKQLSLGMKVSYFAPEATQ 1297 Query: 182 RDQLLENLQ 190 + ++++ Sbjct: 1298 NEDSDDDVE 1306 >UniRef50_P51345 30S ribosomal protein S1, chloroplastic n=2 Tax=Porphyra RepID=RR1_PORPU Length = 263 Score = 191 bits (486), Expect = 5e-47, Method: Composition-based stats. Identities = 63/263 (23%), Positives = 125/263 (47%), Gaps = 14/263 (5%) Query: 4 SFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQ 63 +FA + ++ + + G IV G + + + + VLVD G + +P ++ + Q Sbjct: 12 NFAAVLQKY--KYDLNLGDIVAGTIFSFELNGVLVDIGTPVSAYLPIQEVSSNQELNNFN 69 Query: 64 ---VGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 + D + L + +LS + + AW + + + + I G KGG Sbjct: 70 SLNINDTREFFLLDYNVESRQLILSIRRLEYIRAWKRIRQLLAEDSLLDVRIKGFNKGGM 129 Query: 121 TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 V L GI F+P S ++ K ++ K++ +++K NN+++S R + ++ S Sbjct: 130 IVNLEGISGFVPNSHLN--NFSKNTSSTNKFIKLKLLNVEEKSNNLILSHRRALIAQAS- 186 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 NL G ++G++ +T YG F+ G + GL+HI+++ K+V+ +GD Sbjct: 187 ------SNLIVGNIIEGVINQITPYGLFIKAGNLKGLVHISEINVKQVERIPSQFKIGDT 240 Query: 241 ITVKVLKFDRERTRVSLGLKQLG 263 I ++ D+++ R+SL +K L Sbjct: 241 IKAVIIHVDKKQGRLSLSMKHLK 263 Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 66/268 (24%), Positives = 125/268 (46%), Gaps = 13/268 (4%) Query: 172 AVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKH 230 + +A + +L G V G + + G VD+G V L I +++ + + Sbjct: 7 SFTHRNFAAVLQKYKYDLNLGDIVAGTIFSFELNGVLVDIGTPVSAYLPIQEVSSNQELN 66 Query: 231 PSEIVNVGDEITVKVLKFDRERTRVSLGLKQLG-EDPWVAIAKRYPEGTKLTGRVTNLTD 289 +N+ D +L ++ E ++ L +++L W I + E + L R+ Sbjct: 67 NFNSLNINDTREFFLLDYNVESRQLILSIRRLEYIRAWKRIRQLLAEDSLLDVRIKGFNK 126 Query: 290 YGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC 349 G V +E G+ G V S ++ +KN + +++ +L+++E+ + L ++ Sbjct: 127 GGMIVNLE-GISGFVPNSHLNNFSKNTS-----STNKFIKLKLLNVEEKSNNLILSHRRA 180 Query: 350 KANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREY 409 Q + G+ +EG I IT +G+FI G + GLVH+S+I+ E ++ Sbjct: 181 L---IAQASSNLIVGNIIEGVINQITPYGLFIK-AGNLKGLVHISEINVKQV-ERIPSQF 235 Query: 410 KKGDEIAAVVLQVDAERERISLGVKQLA 437 K GD I AV++ VD ++ R+SL +K L Sbjct: 236 KIGDTIKAVIIHVDKKQGRLSLSMKHLK 263 Score = 131 bits (329), Expect = 9e-29, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 109/245 (44%), Gaps = 12/245 (4%) Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDID 336 G + G + + G V+I V + + E+ +N+ ++ +N+ D E +LD + Sbjct: 27 GDIVAGTIFSFELNGVLVDIGTPVSAYLPIQEVS-SNQELNNFNSLNINDTREFFLLDYN 85 Query: 337 EERRRISLGLKQCK-ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSD 395 E R++ L +++ + W++ + + ++ +IK G+ + L+ GI G V S Sbjct: 86 VESRQLILSIRRLEYIRAWKRIRQLLAEDSLLDVRIKGFNKGGMIVNLE-GISGFVPNSH 144 Query: 396 ISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVT 455 ++ + ++ I +L V+ + + L ++ + G I+ Sbjct: 145 LNNFSKNTSSTNKF-----IKLKLLNVEEKSNNLILSHRRAL---IAQASSNLIVGNIIE 196 Query: 456 GKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAI 515 G + + G ++ A ++G + SE + +VE +GD ++A VD+K + Sbjct: 197 GVINQITPYGLFIK-AGNLKGLVHISEINVKQVERIPSQFKIGDTIKAVIIHVDKKQGRL 255 Query: 516 SLSVR 520 SLS++ Sbjct: 256 SLSMK 260 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 51/249 (20%), Positives = 110/249 (44%), Gaps = 15/249 (6%) Query: 105 AETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDV-RPVRDTLHL-EGKELEFKVIKLDQ 161 + V G I G V++ + A+LP V + + + L EF ++ + Sbjct: 27 GDIVAGTIFSFELNGVLVDIGTPVSAYLPIQEVSSNQELNNFNSLNINDTREFFLLDYNV 86 Query: 162 KRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHIT 221 + +++S R + E ++ + L E + +K G V+L G+ G + + Sbjct: 87 ESRQLILSIRRL---EYIRAWKRIRQLLAEDSLLDVRIKGFNKGGMIVNLEGISGFVPNS 143 Query: 222 DMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLT 281 + K+ S + I +K+L + + + L ++ + G + Sbjct: 144 HL-NNFSKNTS---STNKFIKLKLLNVEEKSNNLILSHRRAL---IAQASSNLIVGNIIE 196 Query: 282 GRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRR 341 G + +T YG F++ ++GLVH+SE++ PS+ +GD ++ +++ +D+++ R Sbjct: 197 GVINQITPYGLFIK-AGNLKGLVHISEINVKQVERIPSQ-FKIGDTIKAVIIHVDKKQGR 254 Query: 342 ISLGLKQCK 350 +SL +K K Sbjct: 255 LSLSMKHLK 263 Score = 53.8 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 38/89 (42%) Query: 451 GAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDR 510 G IV G + + + G V++ V YL E S ++ + L++ D E + Sbjct: 27 GDIVAGTIFSFELNGVLVDIGTPVSAYLPIQEVSSNQELNNFNSLNINDTREFFLLDYNV 86 Query: 511 KNRAISLSVRAKDEADEKDAIATVNKQED 539 ++R + LS+R + I + ++ Sbjct: 87 ESRQLILSIRRLEYIRAWKRIRQLLAEDS 115 >UniRef50_Q6BJC7 DEHA2G03410p n=4 Tax=Saccharomycetales RepID=Q6BJC7_DEBHA Length = 1716 Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 108/592 (18%), Positives = 225/592 (38%), Gaps = 62/592 (10%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE---LEIQVGDE 67 K+I+ ++ G + ++ + + K + A+ + E + Sbjct: 767 AYFKDIKV-DNKMLHGYIKSVTNMGLFISFAGKLTGLVLAKYATDKPDEDLSKKFYKYQS 825 Query: 68 VDVALDAVEDGFGETLLSREKAKRHEAW----ITLEKAYEDAETV--------TGVINGK 115 V + +++ LLS +K++ + + + TV T + Sbjct: 826 VSCRVIRIDEENKRFLLSLKKSENSKDSSNTEEVINPIDSEKSTVGDYTPGVITSAVVKS 885 Query: 116 VKG---------GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLD------ 160 +KG ++ + F S + + + + +++ KVI Sbjct: 886 IKGTQLNVQLADNLQGRVDITQCFNSWSEIKDKKQPLSQFHKNDKIKVKVIGFHDAKTHR 945 Query: 161 ------QKRNNVVVSRRAVIESENSAERDQL----LENLQEGMEVKGIVKNLTDYGAFVD 210 +K N +V +++E E + L N EG + + N+ +V Sbjct: 946 FLPITHRKSNKNIVLELSILEKELKTPDEPYHMLNLSNTSEGSKWVAYINNVAKGFVWVS 1005 Query: 211 L-GGVDGLLHITDMAWKR--VKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPW 267 + + G + +++ + +G I V D + V L + + Sbjct: 1006 ITPTIKGRISFMELSDDVSVFDDIENKLPIGMAIEATVKDIDNDHNTVVLSAR----NST 1061 Query: 268 VAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWT--NKNIHPSKVVNVG 325 + K G KL RV + D VE+ + LV S + + V + Sbjct: 1062 MGTVKDVKVGDKLPARVLKVRDTFVLVELGKN---LVASSFITDALNDYTEKLENVFHTN 1118 Query: 326 DVVEVMVLDIDEERRRISLGLKQCKA-NPWQQFAETHNKGDRVEGKIKSITDFGIFIGLD 384 D VL +DEE ++I++ L+ A + E N+GD + G +K++ + G++I L Sbjct: 1119 DFCTATVLAVDEESKKIAVSLRNDDATDKVIDSIEDLNRGDIIRGFVKNVANNGVYIALG 1178 Query: 385 GGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNW 444 I LV ++D+S + ++ + +K I + E RI + +K+ + N Sbjct: 1179 RSIHALVRITDLSDSFL-KDWKKYFKPHQPIIGKISSC-KEEGRILMTLKESEINGELNV 1236 Query: 445 VALNK---KGAIVTGKVTAVDAKGATVELAD--GVEGYLRASEASRDRVEDATLVLSVGD 499 + + G I G V V GA ++L + G S+ S + VE+ + + GD Sbjct: 1237 LKKFEDLEVGEIFEGSVRRVTDFGAFIKLDGTVNISGLCHHSQISDNDVENVSSLFGEGD 1296 Query: 500 EVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVN-KQEDANFSNNAMAEA 550 V+ K +D++ + +SL ++A + + + + DAN N++ +E+ Sbjct: 1297 RVKVKILAIDQEKKQLSLGMKASYFTNADASSEQDDVEMSDANDQNDSGSES 1348 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 90/551 (16%), Positives = 203/551 (36%), Gaps = 42/551 (7%) Query: 18 TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPA---EQFKNAQGELEIQVGDEVDVALDA 74 PG +V +V I K+ ++ ++ I F + + +G+ + + Sbjct: 317 IEPGILVDALVSDITKNGIVTKVFGLVDATINLPNLNDFDLQTLKHKYTIGNNIKARVTG 376 Query: 75 VEDGFGETLLSREKA-------KRHEAWITLEKAYEDAETVT-GVINGKVKGGFTVELNG 126 + G L + + A+ + G V Sbjct: 377 ILLKSGTKRLMLSQLPHIISFSSSPSDDSSALDAFPIGHIFEEVEVKGSDPNYVFVGFGS 436 Query: 127 --IRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQ 184 + + S +D + + G + + +VI + N +V++ +E + + Sbjct: 437 STLHGQVHNSKIDPSKNLEIDYSVGSKHKARVIGYNSIENLLVLT----MEPKVIDSKFL 492 Query: 185 LLENLQEGMEVKG--IVKNLTDYG-AFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 +++ G V G IVK L D G V + G + L+ M+ R+ +P VG + Sbjct: 493 TTDDIPVGEFVNGAEIVKVLPDSGGIIVKILNGFEALVPGNHMSDVRLVYPERKFKVGGK 552 Query: 241 ITVKVLKFDRERTRVSLGLKQ----LGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI 296 + +VL+ ++ ++ LK+ + +D + + G K V G V Sbjct: 553 VKGRVLR--KQGRKLFFTLKKSLVNIEDDEILTGFDKATVGFKSPATVEKFVHNGAIVSF 610 Query: 297 EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQ---CKANP 353 + + +E+ T N S + +G V V +L+++++ +R+ + L+Q + Sbjct: 611 FGNLRAYLPKNEISETFVN-QASDHLKIGQTVNVKILNVNKDDQRLMVTLRQSIDLSDSQ 669 Query: 354 WQQFAETHNKGDRVEGKIKSITDFGIFIGLDG-GIDGLV---HLSDISWNVAGEEAVREY 409 ++ + + + + L+ + G++ HLSD ++ ++ Sbjct: 670 KATISDLYPGKSITTAIVVEKVKESVIVELENSNLRGVIFSGHLSDGNYEQ-NRSIFKKL 728 Query: 410 KKGDEIAAVVLQVDAERERISLGVKQ-----LAEDPFNNWVALNKK-GAIVTGKVTAVDA 463 GD+I +VL+ D + +++ K +D + K ++ G + +V Sbjct: 729 PIGDKIDVLVLEKDLKSRSVTVSAKASLIEAAKQDEVPAYFKDIKVDNKMLHGYIKSVTN 788 Query: 464 KGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKD 523 G + A + G + A A+ ED + V + +D +N+ LS++ + Sbjct: 789 MGLFISFAGKLTGLVLAKYATDKPDEDLSKKFYKYQSVSCRVIRIDEENKRFLLSLKKSE 848 Query: 524 EADEKDAIATV 534 + + V Sbjct: 849 NSKDSSNTEEV 859 Score = 161 bits (407), Expect = 7e-38, Method: Composition-based stats. Identities = 97/564 (17%), Positives = 218/564 (38%), Gaps = 46/564 (8%) Query: 10 EESLKEIETRPGSIVRGVVVAIDKDVVLVDAG-LKSESAIPAEQFKNAQG--ELEIQVGD 66 +L++ + PG++++ + +I+ V+++ G I ++ KN++ ++ VGD Sbjct: 218 NATLEDEDLTPGNLLQCSIKSIEDHGVILNVGRSNFSGFISNKELKNSKDIEAEDLNVGD 277 Query: 67 EVDVALDAVEDGFGETLLSREKAKRHEAWITL-------EKAYEDAETVTGVINGKVKGG 119 V L ++ ++ + + + E V +++ K G Sbjct: 278 ---VLLTSIVSKPSSRTITLRPVQSNSTSKKASVSTISSVDSIEPGILVDALVSDITKNG 334 Query: 120 FTVELNGI---RAFLPG-SLVDVRPVRDTLHLEGKELEFKVIKL----DQKRNNVVVSRR 171 ++ G+ LP + D++ ++ + G ++ +V + KR + Sbjct: 335 IVTKVFGLVDATINLPNLNDFDLQTLKH-KYTIGNNIKARVTGILLKSGTKRLMLSQLPH 393 Query: 172 AVIESENSAERDQLLENLQEGMEVKGI-VKNLTDYGAFVDLGG--VDGLLHITDMAWKRV 228 + S + ++ L+ G + + VK FV G + G +H + + Sbjct: 394 IISFSSSPSDDSSALDAFPIGHIFEEVEVKGSDPNYVFVGFGSSTLHGQVHNSKI--DPS 451 Query: 229 KHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTG-RVTNL 287 K+ +VG + +V+ ++ + L ++ D P G + G + + Sbjct: 452 KNLEIDYSVGSKHKARVIGYNSIENLLVLTMEPKVIDSKFLTTDDIPVGEFVNGAEIVKV 511 Query: 288 TD--YGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLG 345 G V+I G E LV + M + ++P + VG V+ VL ++ R++ Sbjct: 512 LPDSGGIIVKILNGFEALVPGNHMS-DVRLVYPERKFKVGGKVKGRVLR--KQGRKLFFT 568 Query: 346 LKQCKANPWQQFA----ETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVA 401 LK+ N + G + ++ G + G + + ++IS Sbjct: 569 LKKSLVNIEDDEILTGFDKATVGFKSPATVEKFVHNGAIVSFFGNLRAYLPKNEISETFV 628 Query: 402 GEEAVREYKKGDEIAAVVLQVDAERERISLGVKQ---LAEDPFNNWVALNKKGAIVTGKV 458 +A K G + +L V+ + +R+ + ++Q L++ L +I T V Sbjct: 629 N-QASDHLKIGQTVNVKILNVNKDDQRLMVTLRQSIDLSDSQKATISDLYPGKSITTAIV 687 Query: 459 TAVDAKGATVELAD-GVEGYLRASEASRDRVEDATLVLS---VGDEVEAKFTGVDRKNRA 514 + VEL + + G + + S E + +GD+++ D K+R+ Sbjct: 688 VEKVKESVIVELENSNLRGVIFSGHLSDGNYEQNRSIFKKLPIGDKIDVLVLEKDLKSRS 747 Query: 515 ISLSVRA-KDEADEKDAIATVNKQ 537 +++S +A EA ++D + K Sbjct: 748 VTVSAKASLIEAAKQDEVPAYFKD 771 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 79/508 (15%), Positives = 172/508 (33%), Gaps = 34/508 (6%) Query: 62 IQVGDEVDVALDAV--EDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGG 119 ++G + + + LS E + + + I G Sbjct: 186 FKIGQWLRAKVVKPSSDSKKKRIQLSIEPEVVNATLEDED--LTPGNLLQCSIKSIEDHG 243 Query: 120 FTVELN--GIRAFLPGSLVDVRPVRDTLHL-EGKEL-EFKVIKLDQKRNNVVVSRRAVIE 175 + + F+ + + L G L V K + + + Sbjct: 244 VILNVGRSNFSGFISNKELKNSKDIEAEDLNVGDVLLTSIVSKPSSRTITLRPVQSNSTS 303 Query: 176 SENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEI 234 + S +++++ G+ V +V ++T G + G VD +++ ++ ++ Sbjct: 304 KKASVSTISSVDSIEPGILVDALVSDITKNGIVTKVFGLVDATINLPNLNDFDLQTLKHK 363 Query: 235 VNVGDEITVKVLKFDRERTRVSLGLKQL--------GEDPWVAIAKRYPEGTKLT-GRVT 285 +G+ I +V + L L QL + +P G V Sbjct: 364 YTIGNNIKARVTGILLKSGTKRLMLSQLPHIISFSSSPSDDSSALDAFPIGHIFEEVEVK 423 Query: 286 NLTDYGCFVEIEEG-VEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISL 344 FV + G VH S++D + + +VG + V+ + + L Sbjct: 424 GSDPNYVFVGFGSSTLHGQVHNSKIDPSK---NLEIDYSVGSKHKARVIGYNSIENLLVL 480 Query: 345 GLKQCKANPWQQFAETHNKGDRVEG-KIKSITD--FGIFIGLDGGIDGLVHLSDISWNVA 401 ++ + + G+ V G +I + GI + + G + LV + +S +V Sbjct: 481 TMEPKVIDSKFLTTDDIPVGEFVNGAEIVKVLPDSGGIIVKILNGFEALVPGNHMS-DVR 539 Query: 402 GEEAVREYKKGDEIAAVVLQVDAERERISLGVKQ----LAEDPFNNWVALNKKGAIVTGK 457 R++K G ++ VL+ + ++ +K+ + +D G Sbjct: 540 LVYPERKFKVGGKVKGRVLR--KQGRKLFFTLKKSLVNIEDDEILTGFDKATVGFKSPAT 597 Query: 458 VTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISL 517 V GA V + YL +E S V A+ L +G V K V++ ++ + + Sbjct: 598 VEKFVHNGAIVSFFGNLRAYLPKNEISETFVNQASDHLKIGQTVNVKILNVNKDDQRLMV 657 Query: 518 SVRAKDE--ADEKDAIATVNKQEDANFS 543 ++R + +K I+ + + + Sbjct: 658 TLRQSIDLSDSQKATISDLYPGKSITTA 685 Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 55/311 (17%), Positives = 120/311 (38%), Gaps = 26/311 (8%) Query: 231 PSEIVNVGDEITVKVLK--FDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLT 288 EI +G + KV+K D ++ R+ L ++ + + P G L + ++ Sbjct: 182 LKEIFKIGQWLRAKVVKPSSDSKKKRIQLSIEPEVVNATLEDEDLTP-GNLLQCSIKSIE 240 Query: 289 DYGCFVEIEE-GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISL--- 344 D+G + + G + E+ + ++ +NVGDV+ ++ R I+L Sbjct: 241 DHGVILNVGRSNFSGFISNKELKNSKDIE--AEDLNVGDVLLTSIVS-KPSSRTITLRPV 297 Query: 345 ---GLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVA 401 + + ++ G V+ + IT GI + G +D ++L +++ + Sbjct: 298 QSNSTSKKASVSTISSVDSIEPGILVDALVSDITKNGIVTKVFGLVDATINLPNLN-DFD 356 Query: 402 GEEAVREYKKGDEIAAVVLQV--DAERERISLGV------KQLAEDPFNNWVALNKKGAI 453 + +Y G+ I A V + + +R+ L + ++ + G I Sbjct: 357 LQTLKHKYTIGNNIKARVTGILLKSGTKRLMLSQLPHIISFSSSPSDDSSALDAFPIGHI 416 Query: 454 V-TGKVTAVDAKGATVELADG-VEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRK 511 +V D V + G + S+ D ++ + SVG + +A+ G + Sbjct: 417 FEEVEVKGSDPNYVFVGFGSSTLHGQVHNSKI--DPSKNLEIDYSVGSKHKARVIGYNSI 474 Query: 512 NRAISLSVRAK 522 + L++ K Sbjct: 475 ENLLVLTMEPK 485 >UniRef50_UPI0000E22681 PREDICTED: programmed cell death 11 n=1 Tax=Pan troglodytes RepID=UPI0000E22681 Length = 1491 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 98/540 (18%), Positives = 193/540 (35%), Gaps = 56/540 (10%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE- 61 E F L ESL E G + G V +++ +++ + + + +A + Sbjct: 70 EKFEILSVESLCE-----GMRILGCVKEVNELELVISLPNGLQGFVQVTEICDAYTKKLN 124 Query: 62 ------------------IQVGDEVDVALDAV---EDGFGETLLSREKAKRHEAWITLEK 100 G V + ++ + G LS + + Sbjct: 125 EQVTQEQPLKDLLHLPELFSPGMLVRCVVSSLGITDRGKKSVKLSLNPKNVNRVLSA--E 182 Query: 101 AYEDAETVTGVINGKVKGGFTVELN--GIRAFLP--GSLVDVRPVRDTLHL-EGKELEFK 155 A + +TG ++ G+ V++ G RAFLP + +R L G+ L Sbjct: 183 ALKPGMLLTGTVSSLEDHGYLVDIGVDGTRAFLPLLKAQEYIRQKNKGAKLKVGQYLNCI 242 Query: 156 VIKLDQKRNNVVVS--RRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-- 211 V K+ V +S V + + ++ L NL G+ VK V+ +T +G ++ Sbjct: 243 VEKVKGNGGVVSLSVGHSEVSTAIATEQQSWNLNNLLPGLVVKARVQKVTPFGLTLNFLT 302 Query: 212 --GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVA 269 GV +H+ K + + +L V L L+ + P Sbjct: 303 FFTGVVDFMHLD------PKKAGTYFS-NQAVRACILCVHPRTRVVRLSLRPIFLQPGRP 355 Query: 270 IAK--RYPEGTKLTGRVTN--LTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVG 325 + + G L G +++GV +S + + +P + G Sbjct: 356 LTRLSCQNLGAVLDDVPVQGFFKKAGATFRLKDGVLAYARLSHLSDSKNVFNP-EAFKPG 414 Query: 326 DVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDG 385 + + ++D + L L+ G V+G + +I +G+ + + Sbjct: 415 NTHKCRIIDYSQMDELALLSLRTSIIEAQYLRYHDIEPGAVVKGTVLTIKSYGMLVKVGE 474 Query: 386 GIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQL---AEDPFN 442 + GLV ++ ++ + ++Y GDE+ VL D E +++ + +K+ ++ P Sbjct: 475 QMRGLVPPMHLA-DILMKNPEKKYHIGDEVKCRVLLCDPEAKKLMMTLKKTLIESKLPVI 533 Query: 443 NWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVE 502 N A K G G + V G V+ + V+G + E S + + D V G + Sbjct: 534 NCYADAKPGLQTHGFIIRVKDYGCIVKFYNNVQGLVPKHELSTEYIPDPERVFYTGQRLS 593 Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats. Identities = 84/527 (15%), Positives = 168/527 (31%), Gaps = 89/527 (16%) Query: 49 PAEQFKNAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETV 108 KN + G+ + LLS + ++ E V Sbjct: 398 HLSDSKNVFNPEAFKPGNTHKCRIIDYSQMDELALLSLRTSIIEAQYLRYHDI-EPGAVV 456 Query: 109 TGVINGKVKGGFTVEL-NGIRAFLPGSLVD--VRPVRDTLHLEGKELEFKVIKLDQKRNN 165 G + G V++ +R +P + + + + G E++ +V+ D + Sbjct: 457 KGTVLTIKSYGMLVKVGEQMRGLVPPMHLADILMKNPEKKYHIGDEVKCRVLLCDPEAKK 516 Query: 166 VVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMA 224 ++++ + + E+ + + G++ G + + DYG V V GL+ +++ Sbjct: 517 LMMTLKKTL-IESKLPVINCYADAKPGLQTHGFIIRVKDYGCIVKFYNNVQGLVPKHELS 575 Query: 225 WKRVKHPSEIVNVGDEIT-------VKV-----------------------------LKF 248 + + P + G ++ V L Sbjct: 576 TEYIPDPERVFYTGQRLSRSLKASAAVVEGTLQGLQGLLGGVGQACVVSCQVVKVVVLNC 635 Query: 249 DRERTRVSLGLKQLGEDP---------WVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE- 298 + + R+ L K L DP K G + +V T G V + Sbjct: 636 EPSKERMLLSFK-LSSDPEPKKEPAGHSQKKGKAINTGQLVDVKVLEKTKDGLEVAVLPH 694 Query: 299 GVEGLVHVSEMDWTNKN-IHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQF 357 + + S + N + GD++ VL + + R+ + L Sbjct: 695 NIRAFLPTSHLSDHVANGPLLHHWLQAGDILH-RVLCLSQSEGRV-VSL-------TGIC 745 Query: 358 AETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAA 417 G V G + G +D + S+IS + A Sbjct: 746 GAEEGGGPWVLGW-----------EILGKLDSYL-TSEISPQNQTSD-----------EA 782 Query: 418 VVLQVDAERERISL-GVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEG 476 ++ + E+ +L + +DP N + G ++ G V ++ G ++ G+ G Sbjct: 783 CAMESKSRPEKPALVSTVEGGQDPKN--FSEIHPGMLLIGFVKSIKDYGVFIQFPSGLSG 840 Query: 477 YLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKD 523 + S V + G V AK T VD + + + LS+R D Sbjct: 841 LAPKAIMSDKFVTSTSDHFVEGQTVAAKVTNVDEEKQRMLLSLRLSD 887 Score = 141 bits (355), Expect = 9e-32, Method: Composition-based stats. Identities = 81/490 (16%), Positives = 171/490 (34%), Gaps = 54/490 (11%) Query: 74 AVEDGFGETLLSREKAKRHEAWITLEKAYE--------DAETVTGVINGKVKGGFTVEL- 124 + G + K ++ E+ + + +E + + G + + + L Sbjct: 44 RKKSQKGPAKTKKLKIEKRESSKSAREKFEILSVESLCEGMRILGCVKEVNELELVISLP 103 Query: 125 NGIRAFLPGSLV-------------DVRPVRDTLHLE-----GKELEFKVIKL---DQKR 163 NG++ F+ + + +P++D LHL G + V L D+ + Sbjct: 104 NGLQGFVQVTEICDAYTKKLNEQVTQEQPLKDLLHLPELFSPGMLVRCVVSSLGITDRGK 163 Query: 164 NNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG--GVDGLLHIT 221 +V +S + + R E L+ GM + G V +L D+G VD+G G L + Sbjct: 164 KSVKLS-----LNPKNVNRVLSAEALKPGMLLTGTVSSLEDHGYLVDIGVDGTRAFLPLL 218 Query: 222 DMA-WKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGL------KQLGEDPWVAIAKRY 274 + R K+ + VG + V K VSL + + + Sbjct: 219 KAQEYIRQKNKGAKLKVGQYLNCIVEKVKGNGGVVSLSVGHSEVSTAIATEQQSWNLNNL 278 Query: 275 PEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLD 334 G + RV +T +G + G+V +D V +L Sbjct: 279 LPGLVVKARVQKVTPFGLTLNFLTFFTGVVDFMHLDPKKAGT-----YFSNQAVRACILC 333 Query: 335 IDEERRRISLGLKQC---KANPWQQFAETHNKGDRVEGKIKSI-TDFGIFIGLDGGIDGL 390 + R + L L+ P + + + + ++ G L G+ Sbjct: 334 VHPRTRVVRLSLRPIFLQPGRPLTRLSCQNLGAVLDDVPVQGFFKKAGATFRLKDGVLAY 393 Query: 391 VHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKK 450 LS +S + +K G+ ++ E L ++ + + Sbjct: 394 ARLSHLSDSKNVFNP-EAFKPGNTHKCRIIDYSQMDELALLSLRTSIIEAQYLRYHDIEP 452 Query: 451 GAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDR 510 GA+V G V + + G V++ + + G + + +++ +GDEV+ + D Sbjct: 453 GAVVKGTVLTIKSYGMLVKVGEQMRGLVPPMHLADILMKNPEKKYHIGDEVKCRVLLCDP 512 Query: 511 KNRAISLSVR 520 + + + ++++ Sbjct: 513 EAKKLMMTLK 522 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 87/438 (19%), Positives = 151/438 (34%), Gaps = 89/438 (20%) Query: 13 LKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE-----LEIQVGDE 67 +K+ G +V G V +I V+V I A + E +++VG Sbjct: 1114 IKKHTLSIGDMVTGTVKSIKPTHVVVTLEDGIIGCIHASHILDDVPEGTSPTTKLKVGKT 1173 Query: 68 VDVALDAVED-------GFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 V + D G G L SRE Sbjct: 1174 VTARVIGGRDMKTFKYGGSGGGLASRE--------------------------------I 1201 Query: 121 TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 V + G+ +LP S R VR EL + +L+ + + +S Sbjct: 1202 VVVVGGLGKYLPISH--PRFVRTIP-----ELSVRPSELEDGHTAL---------NTHSV 1245 Query: 181 ERDQLLENLQEGMEVKGIVK--NLTDYGAFVDL-GGVDGLLHI--TDMAWKRVKHPSEIV 235 + ++ Q G V +K N+ V++ + G + + T +++K +KHP + Sbjct: 1246 SPVEKIKQYQAGQTVTCFLKKYNVVKKWLEVEIAPDIRGRIPLLLTSLSFKVLKHPDKKF 1305 Query: 236 NVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDY-GCFV 294 VG + V+ D +T + L L + EG GRV +T G V Sbjct: 1306 RVGQALRATVVGPDSSKTFLCLSL---------TGPHKLEEGEVAMGRVVKVTPNEGLTV 1356 Query: 295 EIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPW 354 G G V + M + P + VV +L ++L L+ + NP Sbjct: 1357 SFPFGKIGTVSIFHMSDSYSET-PLEDFVPQKVVRCYILS--TADNVLTLSLRSSRTNPE 1413 Query: 355 QQFA---------ETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEA 405 + + +G + G + SI G+F L + GL S +S + ++ Sbjct: 1414 TKSKVEDPEINSIQDIKEGQLLRGYVGSIQPHGVFFRLGPSVVGLARYSHVSQHSPSKKT 1473 Query: 406 V--REYKKGDEIAAVVLQ 421 + + +G + A VL+ Sbjct: 1474 LYNKHLPEGKLLTARVLR 1491 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 98/581 (16%), Positives = 180/581 (30%), Gaps = 107/581 (18%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVE 76 E PG + VV + +D +V +G + + G+ E++ G + V + V+ Sbjct: 928 EMTPGMFLDLVVREVLEDGSVVFSGGPVPDLVLKASRYHRAGQ-EVESGQKKKVVILNVD 986 Query: 77 DGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT---VELNGIRAFLPG 133 E +S + + L V+ K VE + AF Sbjct: 987 LLKLEVHVSLHQDLVNRKARKLR----KGSEHQAVVQHLEKSFAIASLVETGHLAAFSLT 1042 Query: 134 SLVDVRPVRDTLHL-EGKELEFKVIKLDQK-------------RNNVVVSRRAVIESENS 179 S ++ D+ L G+ + + + + + +R+ + Sbjct: 1043 SHLNDTFRFDSEKLQVGQGVSLTLKTTEPGVTGLLLAVEGPAAKRTMRPTRKDSETVDED 1102 Query: 180 AERDQLL-------ENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVK-- 229 E D L L G V G VK++ V L G+ G +H + + + Sbjct: 1103 EEVDPALTVGTIKKHTLSIGDMVTGTVKSIKPTHVVVTLEDGIIGCIHASHILDDVPEGT 1162 Query: 230 HPSEIVNVGDEITVKVLKFDRER-------------------------------TRVSLG 258 P+ + VG +T +V+ + R Sbjct: 1163 SPTTKLKVGKTVTARVIGGRDMKTFKYGGSGGGLASREIVVVVGGLGKYLPISHPRFVRT 1222 Query: 259 LKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYG------CF------------VEIEEGV 300 + +L P T V + Y CF VEI + Sbjct: 1223 IPELSVRPSELEDGHTALNTHSVSPVEKIKQYQAGQTVTCFLKKYNVVKKWLEVEIAPDI 1282 Query: 301 EGLVHVSEMDWTNKNI-HPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAE 359 G + + + K + HP K VG + V+ D + + L L Sbjct: 1283 RGRIPLLLTSLSFKVLKHPDKKFRVGQALRATVVGPDSSKTFLCLSL---------TGPH 1333 Query: 360 THNKGDRVEGKIKSITDF-GIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAV 418 +G+ G++ +T G+ + G G V + +S + E + ++ + Sbjct: 1334 KLEEGEVAMGRVVKVTPNEGLTVSFPFGKIGTVSIFHMSDSY-SETPLEDFVPQKVVRCY 1392 Query: 419 VLQVDAERERISLGV---------KQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVE 469 +L ++L + K EDP N + K+G ++ G V ++ G Sbjct: 1393 ILS--TADNVLTLSLRSSRTNPETKSKVEDPEINSIQDIKEGQLLRGYVGSIQPHGVFFR 1450 Query: 470 LADGVEGYLRASEASRDRVEDA---TLVLSVGDEVEAKFTG 507 L V G R S S+ L G + A+ Sbjct: 1451 LGPSVVGLARYSHVSQHSPSKKTLYNKHLPEGKLLTARVLR 1491 Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 96/641 (14%), Positives = 198/641 (30%), Gaps = 133/641 (20%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA---QGELEIQVGDEVDVALD 73 E PG ++ G V +I V + P + G V + Sbjct: 811 EIHPGMLLIGFVKSIKDYGVFIQFPSGLSGLAPKAIMSDKFVTSTSDHFVEGQTVAAKVT 870 Query: 74 AVEDGFGETLLSREKAK----------------RHEAWITLEKAYEDAETVTGVINGKVK 117 V++ LLS + E + + ++V ++ Sbjct: 871 NVDEEKQRMLLSLRLSDCGLGDLAITSLLLLNQCLEELQGVRSLMSNRDSVLIQTLAEMT 930 Query: 118 GGFTVEL-------NGIRAFLPGSLVDV-----RPVRDTLHLE-GKELEFKVIKLDQKRN 164 G ++L +G F G + D+ R R +E G++ + ++ +D + Sbjct: 931 PGMFLDLVVREVLEDGSVVFSGGPVPDLVLKASRYHRAGQEVESGQKKKVVILNVDLLKL 990 Query: 165 NVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGA---FVDLGGVDGLLHIT 221 V VS + + + + L++G E + +V++L A V+ G + + Sbjct: 991 EVHVSLHQDLVNRKARK-------LRKGSEHQAVVQHLEKSFAIASLVETGHLAAFSLTS 1043 Query: 222 DMAWKRVKHPSEIVNVGDEITVKVLKFDR---------ERTRVSLGLKQL---------- 262 + SE + VG +++ + + E ++ Sbjct: 1044 HLNDTFRFD-SEKLQVGQGVSLTLKTTEPGVTGLLLAVEGPAAKRTMRPTRKDSETVDED 1102 Query: 263 -GEDPWVAIAKRYPE----GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSE-MDWTNKNI 316 DP + + G +TG V ++ V +E+G+ G +H S +D + Sbjct: 1103 EEVDPALTVGTIKKHTLSIGDMVTGTVKSIKPTHVVVTLEDGIIGCIHASHILDDVPEGT 1162 Query: 317 HPSKVVNVGDVVEVMVL-DIDEE------------RRRI--------------------- 342 P+ + VG V V+ D + R I Sbjct: 1163 SPTTKLKVGKTVTARVIGGRDMKTFKYGGSGGGLASREIVVVVGGLGKYLPISHPRFVRT 1222 Query: 343 --SLGLKQCKANP-----------WQQFAETHNKGDRVEGKIK--SITDFGIFIGLDGGI 387 L ++ + + + + G V +K ++ + + + I Sbjct: 1223 IPELSVRPSELEDGHTALNTHSVSPVEKIKQYQAGQTVTCFLKKYNVVKKWLEVEIAPDI 1282 Query: 388 DGLVHLSDISWN-VAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVA 446 G + L S + + ++++ G + A V+ D+ + + L + Sbjct: 1283 RGRIPLLLTSLSFKVLKHPDKKFRVGQALRATVVGPDSSKTFLCLSL---------TGPH 1333 Query: 447 LNKKGAIVTGKVTAVDAK-GATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKF 505 ++G + G+V V G TV G G + S E V Sbjct: 1334 KLEEGEVAMGRVVKVTPNEGLTVSFPFGKIGTVSIFHMSDSYSETPLEDFVPQKVVRCYI 1393 Query: 506 TGVDRKNRAISLSVRAK---DEADEKDAIATVNKQEDANFS 543 + ++LS+R+ E K +N +D Sbjct: 1394 LS--TADNVLTLSLRSSRTNPETKSKVEDPEINSIQDIKEG 1432 Score = 91.9 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 53/313 (16%), Positives = 103/313 (32%), Gaps = 37/313 (11%) Query: 236 NVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVE 295 + K K E+ S ++ E + + EG ++ G V + + + Sbjct: 45 KKSQKGPAKTKKLKIEKRESSKSAREKFE---ILSVESLCEGMRILGCVKEVNELELVIS 101 Query: 296 IEEGVEGLVHVSEMDWT---------------NKNIHPSKVVNVGDVVEVMVLDI---DE 337 + G++G V V+E+ +H ++ + G +V +V + D Sbjct: 102 LPNGLQGFVQVTEICDAYTKKLNEQVTQEQPLKDLLHLPELFSPGMLVRCVVSSLGITDR 161 Query: 338 ERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLD-GGIDGLVHLSDI 396 ++ + L L N AE G + G + S+ D G + + G + L Sbjct: 162 GKKSVKLSLNPKNVN-RVLSAEALKPGMLLTGTVSSLEDHGYLVDIGVDGTRAFLPLLKA 220 Query: 397 SWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVK--------QLAEDPFNNWVALN 448 + + + K G + +V +V +SL V + +N + Sbjct: 221 QEYIRQKNKGAKLKVGQYLNCIVEKVKGNGGVVSLSVGHSEVSTAIATEQQSWN--LNNL 278 Query: 449 KKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGV 508 G +V +V V G T+ G + + V A V Sbjct: 279 LPGLVVKARVQKVTPFGLTLNFLTFFTGVVDFMHLDPKK----AGTYFSNQAVRACILCV 334 Query: 509 DRKNRAISLSVRA 521 + R + LS+R Sbjct: 335 HPRTRVVRLSLRP 347 Score = 84.6 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 99/567 (17%), Positives = 172/567 (30%), Gaps = 122/567 (21%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQV---GDEVD---- 69 + +PG G ++ + +V + +P + +V G + Sbjct: 538 DAKPGLQTHGFIIRVKDYGCIVKFYNNVQGLVPKHELSTEYIPDPERVFYTGQRLSRSLK 597 Query: 70 ---VALD-----------------------------AVEDGFGETLLSRE-------KAK 90 ++ E LLS + K + Sbjct: 598 ASAAVVEGTLQGLQGLLGGVGQACVVSCQVVKVVVLNCEPSKERMLLSFKLSSDPEPKKE 657 Query: 91 RHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL--NGIRAFLPGSLVDVR----PVRDT 144 KA + V + K K G V + + IRAFLP S + P+ Sbjct: 658 PAGHSQKKGKAINTGQLVDVKVLEKTKDGLEVAVLPHNIRAFLPTSHLSDHVANGPLLHH 717 Query: 145 LHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTD 204 G L +V+ L Q VV E E L Sbjct: 718 WLQAGDILH-RVLCLSQSEGRVVSLTGICGAEEGGGPWVLGWEIL--------------- 761 Query: 205 YGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGE 264 G +D L ++++ + DE K E+ + + + G+ Sbjct: 762 -------GKLDSYLT-SEISPQN--------QTSDEACAMESKSRPEKPAL-VSTVEGGQ 804 Query: 265 DPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNV 324 DP G L G V ++ DYG F++ G+ GL + M S Sbjct: 805 DP--KNFSEIHPGMLLIGFVKSIKDYGVFIQFPSGLSGLAPKAIMS-DKFVTSTSDHFVE 861 Query: 325 GDVVEVMVLDIDEERRRISLGLK------------------QCKANPWQQFAETHNKGDR 366 G V V ++DEE++R+ L L+ QC + N+ Sbjct: 862 GQTVAAKVTNVDEEKQRMLLSLRLSDCGLGDLAITSLLLLNQCLEELQGVRSLMSNRDSV 921 Query: 367 VEGKIKSITDFGIFIG------LDGGIDGL--VHLSDISWNV-AGEEAVREYKKGDEIAA 417 + + +T G+F+ L+ G + D+ A +E + G + Sbjct: 922 LIQTLAEMTP-GMFLDLVVREVLEDGSVVFSGGPVPDLVLKASRYHRAGQEVESGQKKKV 980 Query: 418 VVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELAD--GVE 475 V+L VD + + + L +D N +KG+ V ++ A L + + Sbjct: 981 VILNVDLLKLEVHVS---LHQDLVNRKARKLRKGSEHQAVVQHLEKSFAIASLVETGHLA 1037 Query: 476 GYLRASEASRDRVEDATLVLSVGDEVE 502 + S + D + L VG V Sbjct: 1038 AFSLTSHLNDTFRFD-SEKLQVGQGVS 1063 >UniRef50_B2W7W2 rRNA biogenesis protein RRP5 n=1 Tax=Pyrenophora tritici-repentis Pt-1C-BFP RepID=B2W7W2_PYRTR Length = 1760 Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats. Identities = 96/518 (18%), Positives = 190/518 (36%), Gaps = 48/518 (9%) Query: 61 EIQVGDEVDVAL-----------DAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVT 109 + ++G +V + V LS + + + + V Sbjct: 405 KYKIGSKVKARILFTCPNSEPRKVGVSLLDHVVSLSTRMSGKPKERKPPIDLLPISTIVE 464 Query: 110 ----GVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGK-----ELEFKVIKLD 160 + F + + + F S + V G+ + ++I + Sbjct: 465 SAKVVKVAPAQGAFFDLGIKDVVGFAHISRLSDDKVDVISEESGQFKLDSTHKARIIGYN 524 Query: 161 QKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNL--TDYGA---FVDL-GGV 214 +S +E + + +E++Q G VKG V L GA V L G+ Sbjct: 525 ALDGIFQLS----LEQKVLDQPFLRIEDIQAGQVVKGKVHKLIADKTGAAAVLVHLADGI 580 Query: 215 DGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGED----PWVAI 270 GL+ +A R++HP G +T +VL + R ++ L LK+ + PW Sbjct: 581 TGLVPEAHLADVRLQHPERKFREGVPVTARVLYTEPARHQIQLTLKKSLVNSDTKPWTN- 639 Query: 271 AKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEV 330 + EG G +T++ G V V+ + +EM N ++ G VV+V Sbjct: 640 YEMLSEGLTGPGILTSVRRNGATVRFYGDVKAWLPAAEMSEAFIN-DATRHFTNGQVVKV 698 Query: 331 MVLDIDEERRRISLGLK--QCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGID 388 ++ +D + R++ + K N + N D V+G + +D + + G+ Sbjct: 699 RIISVDAKERQLLVSCKDPAAVDNNREAAFNALNPSDIVKGTVLEKSDDSATLDIGNGVK 758 Query: 389 GLVHLSDISWNVAGEEA--VREYKKGDEIAAVVLQVDAER-------ERISLGVKQLAED 439 G++ + ++ A ++ +++ + G + +V+ + + SL K Sbjct: 759 GILRIGHLTDGSAKKDISTMKKIRIGGTLEELVVLTKHGKTRSATVSNKPSL-RKDAQAS 817 Query: 440 PFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGD 499 + + G V G V + VEL +G+ G L S+ + + + L Sbjct: 818 KLAISIEDLQAGETVHGFVRGILPDKIFVELGNGISGVLFKSQLPEEMISEPNFGLRKDQ 877 Query: 500 EVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQ 537 + A+ T VD LS++A+ E D + + K Sbjct: 878 SISARVTHVDVGKGFFWLSMKAESELDSANTVDPPMKA 915 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 105/654 (16%), Positives = 222/654 (33%), Gaps = 127/654 (19%) Query: 18 TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEV-------DV 70 P IV+G V+ D +D G + + + + +I ++ ++ Sbjct: 731 LNPSDIVKGTVLEKSDDSATLDIGNGVKGILRIGHLTDGSAKKDISTMKKIRIGGTLEEL 790 Query: 71 ALDAVEDGFGETLLSREKAKRHEAWI-TLEKAYED---AETVTGVINGKVKGGFTVEL-N 125 + +S + + R +A L + ED ETV G + G + VEL N Sbjct: 791 VVLTKHGKTRSATVSNKPSLRKDAQASKLAISIEDLQAGETVHGFVRGILPDKIFVELGN 850 Query: 126 GIRAFLPGSLVDVRPVRDTLH--LEGKELEFKVIKLDQKRNNVVVSRRAVIESENS---- 179 GI L S + + + + + + +V +D + +S +A E +++ Sbjct: 851 GISGVLFKSQLPEEMISEPNFGLRKDQSISARVTHVDVGKGFFWLSMKAESELDSANTVD 910 Query: 180 -------------AERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAW 225 + ++++ G +K + V+L V G + ++++ Sbjct: 911 PPMKAGETLVDPVDSKILTTDDIKFGTLTTVRIKTVKSTQLNVELADNVQGRISVSELFD 970 Query: 226 KRV-----KHPSEIVNVGDEITVKVLKFDRERT--RVSLGLKQLGEDPWVAIAKRY---- 274 K+P+ + +++ +VL R + + + + P + Sbjct: 971 GWDSIPDKKNPTAHFKMNEKVQARVLGRHDARNFRFLPITSRSNHKTPVYEMTANTDKIK 1030 Query: 275 -----------PEGTKLTGRVTNLTDYGCFVEIEEGVEG--------------------- 302 G+ T V N+ D +V I V G Sbjct: 1031 READVLSLDKITPGSSHTAFVNNIADRYVWVNISANVRGPGKLDLTAVSTVTGKTMSLQD 1090 Query: 303 ------------LVH-----------------VSEMDWTNKNIHPSKVVNVGDVVEVMVL 333 +H + ++ P+K VGDV+ V V+ Sbjct: 1091 IKVGYILPARVTKIHEASIVVQINEKLAAPIFLEQLADDYDMAKPNK-FKVGDVLRVCVI 1149 Query: 334 DIDEERRRISLGLKQCKA--------NPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDG 385 DID +++ L + + +P + V G IK + G+++ L Sbjct: 1150 DIDIPNKKLGLSARPSRVLSSSLTVRDPEIKDKSQLKVHQVVRGFIKHVASNGVYVRLGP 1209 Query: 386 GIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLA-----EDP 440 ++ V +S +S + ++ + + ++ ++ + +K +P Sbjct: 1210 HVEAYVRVSHLS-DEYIKDWKSAFHVDQLVTGKIISNKEDQRNPQMSLKTSVIQGNYTEP 1268 Query: 441 FNNWVALNKKGAIVTGKVTAVDAKGAT--VELADGVEGYLRASEASRDRV--EDATLVLS 496 + K G IVT KV V+ G V+ + V G S+ + + V + + Sbjct: 1269 LE--FSDLKVGQIVTAKVRHVEDFGVFLVVDNSSNVSGLCHISQLADNAVDKDKIKDMYK 1326 Query: 497 VGDEVEAKFTGVDRKNRAISLSVRAKDE--ADEKDAIATVNKQEDANFSNNAMA 548 D V+AK ++ K R IS +++ E + + ++ E A S++ Sbjct: 1327 KDDVVKAKIVKIEPKQRKISFTLKYSQIKGDGEDEDMEDASEDELAEESDSDGG 1380 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 103/592 (17%), Positives = 211/592 (35%), Gaps = 83/592 (14%) Query: 21 GSIVRGVVVAIDKDVVLVDAGLKSESAIPAE----------------------------Q 52 G+IV G ++ I +++ +P Sbjct: 153 GTIVLGQIIDISHQDLVLALPNNLVGYVPLTAVSDKLNERLEKLLKDEGAEKKEGSEDGD 212 Query: 53 FKNAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAET----- 107 F++ + VG + + A + R++ + + K + Sbjct: 213 FEDVDLKDMFSVGQYIRACITATNEDNARA---RKRLELSIDPKLVNKGLTKRKIPVNSM 269 Query: 108 VTGVINGKVKGGFTVELN----GIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKR 163 V + G ++L ++ FLP + + ++ EG V ++ Sbjct: 270 VQASVVSNEDHGLVMDLGLGDANLKGFLPKGELGPK-IQHAKVQEGAVFMCLVTGINSDG 328 Query: 164 NNVVVSRRAV----IESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLH 219 V +S I N+ ++ G V +V + T +G + GL+ Sbjct: 329 RIVKLSADHTKAGNITKGNTLTEAPTIDVFLPGTAVDILVADTTSSTL---VGKILGLID 385 Query: 220 ITDMAWK-----RVKHPSEIVNVGDEITVKVLKFDR--ERTRVSLGL--------KQLGE 264 T A+ + S+ +G ++ ++L E +V + L ++ Sbjct: 386 ATADAYHSGATEKAADVSQKYKIGSKVKARILFTCPNSEPRKVGVSLLDHVVSLSTRMSG 445 Query: 265 DPWVA--IAKRYPEGTKLTG-RVTNLTD-YGCFVEIE-EGVEGLVHVSEMDWTNKNIHPS 319 P P T + +V + G F ++ + V G H+S + ++ Sbjct: 446 KPKERKPPIDLLPISTIVESAKVVKVAPAQGAFFDLGIKDVVGFAHISRLSDDKVDVISE 505 Query: 320 KV--VNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSIT-- 375 + + + ++ + L L+Q + E G V+GK+ + Sbjct: 506 ESGQFKLDSTHKARIIGYNALDGIFQLSLEQKVLDQPFLRIEDIQAGQVVKGKVHKLIAD 565 Query: 376 DFGI---FIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLG 432 G + L GI GLV + ++ +V + R++++G + A VL + R +I L Sbjct: 566 KTGAAAVLVHLADGITGLVPEAHLA-DVRLQHPERKFREGVPVTARVLYTEPARHQIQLT 624 Query: 433 VKQLAED----PFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRV 488 +K+ + P+ N+ + +G G +T+V GATV V+ +L A+E S + Sbjct: 625 LKKSLVNSDTKPWTNY-EMLSEGLTGPGILTSVRRNGATVRFYGDVKAWLPAAEMSEAFI 683 Query: 489 EDATLVLSVGDEVEAKFTGVDRKNRAISLSVR--AKDEADEKDAIATVNKQE 538 DAT + G V+ + VD K R + +S + A + + + A +N + Sbjct: 684 NDATRHFTNGQVVKVRIISVDAKERQLLVSCKDPAAVDNNREAAFNALNPSD 735 Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats. Identities = 103/575 (17%), Positives = 207/575 (36%), Gaps = 45/575 (7%) Query: 7 QLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAG---LKSESAIPAEQFKNAQGELEIQ 63 +L + L + + S+V+ VV+ + +++D G + +P + ++Q Sbjct: 253 KLVNKGLTKRKIPVNSMVQASVVSNEDHGLVMDLGLGDANLKGFLPKGELGPKIQHAKVQ 312 Query: 64 VGDEVDVALDAVEDGFGETLLS--REKAKRHEAWITLEKA-----YEDAETVTGVINGKV 116 G + + LS KA TL +A + V ++ Sbjct: 313 EGAVFMCLVTGINSDGRIVKLSADHTKAGNITKGNTLTEAPTIDVFLPGTAVDILVADTT 372 Query: 117 KGGFTVELNG-IRAFLPGSLVD-VRPVRDTL--HLEGKELEFKVIKL--DQKRNNVVVSR 170 ++ G I A D + G +++ +++ + + V VS Sbjct: 373 SSTLVGKILGLIDATADAYHSGATEKAADVSQKYKIGSKVKARILFTCPNSEPRKVGVSL 432 Query: 171 RAVIESE------NSAERDQLLENLQEGMEVK-GIVKNLTD-YGAFVDLG--GVDGLLHI 220 + S ER ++ L V+ V + GAF DLG V G HI Sbjct: 433 LDHVVSLSTRMSGKPKERKPPIDLLPISTIVESAKVVKVAPAQGAFFDLGIKDVVGFAHI 492 Query: 221 TDMAWKRVKHPSEI---VNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEG 277 + ++ +V SE + +++ ++ L L+Q D + G Sbjct: 493 SRLSDDKVDVISEESGQFKLDSTHKARIIGYNALDGIFQLSLEQKVLDQPFLRIEDIQAG 552 Query: 278 TKLTGRVTNL--TDYGC---FVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMV 332 + G+V L G V + +G+ GLV + + + HP + G V V Sbjct: 553 QVVKGKVHKLIADKTGAAAVLVHLADGITGLVPEAHLA-DVRLQHPERKFREGVPVTARV 611 Query: 333 LDIDEERRRISLGLKQCKANPWQQFA---ETHNKGDRVEGKIKSITDFGIFIGLDGGIDG 389 L + R +I L LK+ N + E ++G G + S+ G + G + Sbjct: 612 LYTEPARHQIQLTLKKSLVNSDTKPWTNYEMLSEGLTGPGILTSVRRNGATVRFYGDVKA 671 Query: 390 LVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQ--LAEDPFNNWVAL 447 + +++S + A R + G + ++ VDA+ ++ + K ++ Sbjct: 672 WLPAAEMSEAFIND-ATRHFTNGQVVKVRIISVDAKERQLLVSCKDPAAVDNNREAAFNA 730 Query: 448 NKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVED---ATLVLSVGDEV-EA 503 IV G V AT+++ +GV+G LR + + + +G + E Sbjct: 731 LNPSDIVKGTVLEKSDDSATLDIGNGVKGILRIGHLTDGSAKKDISTMKKIRIGGTLEEL 790 Query: 504 KFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQE 538 K R+ ++S + D + + ++ ++ Sbjct: 791 VVLTKHGKTRSATVSNKPSLRKDAQASKLAISIED 825 Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats. Identities = 91/584 (15%), Positives = 196/584 (33%), Gaps = 117/584 (20%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA---QGELEIQVGDEVDVALD 73 + + G V G V I D + V+ G + Q + ++ + + Sbjct: 825 DLQAGETVHGFVRGILPDKIFVELGNGISGVLFKSQLPEEMISEPNFGLRKDQSISARVT 884 Query: 74 AVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGK------VKGG-------- 119 V+ G G LS + ++ T++ + ET+ ++ K +K G Sbjct: 885 HVDVGKGFFWLSMKAESELDSANTVDPPMKAGETLVDPVDSKILTTDDIKFGTLTTVRIK 944 Query: 120 ------FTVEL-NGIRAFLPGSLV-----DVRPVRDTLHL--EGKELEFKVIKLDQKRNN 165 VEL + ++ + S + + ++ ++++ +V+ RN Sbjct: 945 TVKSTQLNVELADNVQGRISVSELFDGWDSIPDKKNPTAHFKMNEKVQARVLGRHDARNF 1004 Query: 166 VVVS-------RRAVIESENSAERDQL------LENLQEGMEVKGIVKNLTDYGAFVDLG 212 + + V E + ++ + L+ + G V N+ D +V++ Sbjct: 1005 RFLPITSRSNHKTPVYEMTANTDKIKREADVLSLDKITPGSSHTAFVNNIADRYVWVNIS 1064 Query: 213 -GVDG--------------------------------------------------LLHIT 221 V G + + Sbjct: 1065 ANVRGPGKLDLTAVSTVTGKTMSLQDIKVGYILPARVTKIHEASIVVQINEKLAAPIFLE 1124 Query: 222 DMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQ--------LGEDPWVAIAKR 273 +A VGD + V V+ D ++ L + DP + + Sbjct: 1125 QLADDYDMAKPNKFKVGDVLRVCVIDIDIPNKKLGLSARPSRVLSSSLTVRDPEIKDKSQ 1184 Query: 274 YPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVL 333 + G + ++ G +V + VE V VS + +V +V ++ Sbjct: 1185 LKVHQVVRGFIKHVASNGVYVRLGPHVEAYVRVSHLSDEY-IKDWKSAFHVDQLVTGKII 1243 Query: 334 DIDEERRRISLGLKQCKANPWQQFA---ETHNKGDRVEGKIKSITDFGIFIGLDG--GID 388 E++R + LK G V K++ + DFG+F+ +D + Sbjct: 1244 SNKEDQRNPQMSLKTSVIQGNYTEPLEFSDLKVGQIVTAKVRHVEDFGVFLVVDNSSNVS 1303 Query: 389 GLVHLSDISWNVAGEEAVRE-YKKGDEIAAVVLQVDAERERISLGVK--QLAEDPFNNWV 445 GL H+S ++ N ++ +++ YKK D + A +++++ ++ +IS +K Q+ D + + Sbjct: 1304 GLCHISQLADNAVDKDKIKDMYKKDDVVKAKIVKIEPKQRKISFTLKYSQIKGDGEDEDM 1363 Query: 446 ALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVE 489 + + +EL + V+ S S + VE Sbjct: 1364 EDASEDELAE-----ESDSDGGIELDEDVDMRSVKSAESDNDVE 1402 Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats. Identities = 59/311 (18%), Positives = 127/311 (40%), Gaps = 26/311 (8%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA---QGELEIQVGDE 67 +++ + + G I+ V I + ++V K + I EQ + + +VGD Sbjct: 1084 KTMSLQDIKVGYILPARVTKIHEASIVVQINEKLAAPIFLEQLADDYDMAKPNKFKVGDV 1143 Query: 68 VDVALDAVEDGFGETLLSREKAKRHEAWITLEK-------AYEDAETVTGVINGKVKGGF 120 + V + ++ + LS ++ + +T+ + + V G I G Sbjct: 1144 LRVCVIDIDIPNKKLGLSARPSRVLSSSLTVRDPEIKDKSQLKVHQVVRGFIKHVASNGV 1203 Query: 121 TVELN-GIRAFLPGSLVDVRPVRDTLH--LEGKELEFKVIKLDQKRNNVVVSRRAVIESE 177 V L + A++ S + ++D + + K+I + + N +S + + Sbjct: 1204 YVRLGPHVEAYVRVSHLSDEYIKDWKSAFHVDQLVTGKIISNKEDQRNPQMSLKTSVIQG 1263 Query: 178 NSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG---GVDGLLHITDMAWKRV--KHPS 232 N E + +L+ G V V+++ D+G F+ + V GL HI+ +A V Sbjct: 1264 NYTEPLE-FSDLKVGQIVTAKVRHVEDFGVFLVVDNSSNVSGLCHISQLADNAVDKDKIK 1322 Query: 233 EIVNVGDEITVKVLKFDRERTRVSLGLK--QLGEDPWVAIAKRYPEGTKLTGRVTNLTDY 290 ++ D + K++K + ++ ++S LK Q+ D + E + +D Sbjct: 1323 DMYKKDDVVKAKIVKIEPKQRKISFTLKYSQIKGDGEDEDMEDASEDELAEE---SDSDG 1379 Query: 291 GCFVEIEEGVE 301 G +E++E V+ Sbjct: 1380 G--IELDEDVD 1388 >UniRef50_Q9LHM6 Pre-rRNA processing protein RRP5 n=6 Tax=rosids RepID=Q9LHM6_ARATH Length = 1765 Score = 188 bits (478), Expect = 5e-46, Method: Composition-based stats. Identities = 102/526 (19%), Positives = 189/526 (35%), Gaps = 33/526 (6%) Query: 20 PGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL----EIQVGDEVDVALDAV 75 PG +V V ++ ++ +L D + KN E V+ + + Sbjct: 185 PGMMVNARVQSVLENGILFDFLTYFNGTVDLFHLKNPLSNKSWKDEYNQNKTVNARILFI 244 Query: 76 EDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSL 135 + L+ L + + K G +EL P Sbjct: 245 DPSSRAVGLTLSPHVVCNKAPPLHV-FSGDIFDEAKVVRIDKSGLLLELPSKPTPTPAYT 303 Query: 136 VDVRPVR----DTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQE 191 D + EG + +V+ L Q V + ++ +++ Sbjct: 304 YDAAGDEVTKLEKKFKEGNHIRVRVLGLKQMEGLAVGT----LKESAFEGPVFTHSDVKP 359 Query: 192 GMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDR 250 GM K V ++ +GA V GG+ + + M+ V P + VG E+ +VL Sbjct: 360 GMVTKAKVISVDTFGAIVQFSGGLKAMCPLRHMSEFEVTKPRKKFKVGAELVFRVLGC-- 417 Query: 251 ERTRVSLGLKQLGED---PWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVS 307 + R+++ K+ P ++ EG G +T + +GCFV GV+G V Sbjct: 418 KSKRITVTYKKTLVKSKLPILSSYTDATEGLVTHGWITKIEKHGCFVRFYNGVQGFVPRF 477 Query: 308 EMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRV 367 E+ P V +VG+VV+ V +RI+L ++ G V Sbjct: 478 ELGLE-PGSDPDSVFHVGEVVKCRVTSAVHGTQRITLSF--MIKPSSVSEDDSIKLGSIV 534 Query: 368 EGKIKSITDFGIFIGLDGG--IDGLVHLSDISWNVAGEEAV-REYKKGDEIAAVVLQVDA 424 G I +IT + + + + G + ++ + + + + G E+ +L +D Sbjct: 535 SGIIDTITSQAVIVRVKSKSVVKGTISAEHLADHHEQAKLIMSLLRPGYELD-KLLVLDI 593 Query: 425 ERERISLG-----VKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLR 479 E ++L +K E P + + ++V G V + G V + G+ Sbjct: 594 EGNNMALSSKYSLIKLAEELPSD--FNQLQPNSVVHGYVCNLIENGCFVRFLGRLTGFAP 651 Query: 480 ASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEA 525 S+A D D + VG V A V+++ I+LS++ A Sbjct: 652 RSKAIDDPKADVSESFFVGQSVRANIVDVNQEKSRITLSLKQSSCA 697 Score = 164 bits (415), Expect = 9e-39, Method: Composition-based stats. Identities = 92/562 (16%), Positives = 198/562 (35%), Gaps = 59/562 (10%) Query: 21 GSIV-RGVVVAIDKDVVLVDAGLK-SESAIPAEQFKNAQG---ELEIQVGDEVDVALDAV 75 G I VV IDK +L++ K + + + E + + G+ + V + + Sbjct: 272 GDIFDEAKVVRIDKSGLLLELPSKPTPTPAYTYDAAGDEVTKLEKKFKEGNHIRVRVLGL 331 Query: 76 EDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL-NGIRAFLPGS 134 + G + + +++ T + + G V+ G++A P Sbjct: 332 KQMEGLAVGTLKESAFEGPVFTHSD-VKPGMVTKAKVISVDTFGAIVQFSGGLKAMCPLR 390 Query: 135 LVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEG 192 + V G EL F+V+ KR V + V ++ + EG Sbjct: 391 HMSEFEVTKPRKKFKVGAELVFRVLGCKSKRITVTYKKTLV---KSKLPILSSYTDATEG 447 Query: 193 MEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRE 251 + G + + +G FV GV G + ++ + P + +VG+ + +V Sbjct: 448 LVTHGWITKIEKHGCFVRFYNGVQGFVPRFELGLEPGSDPDSVFHVGEVVKCRVTSAVHG 507 Query: 252 RTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEG--VEGLVHVSEM 309 R++L + + V+ G+ ++G + +T V ++ V+G + + Sbjct: 508 TQRITLSF--MIKPSSVSEDDSIKLGSIVSGIIDTITSQAVIVRVKSKSVVKGTISAEHL 565 Query: 310 DWTNKNIHP-SKVVNVGDVVEVMVLDIDEERRRISLGLKQCK---ANPWQQFAETHNKGD 365 ++ ++ G ++ +L +D E ++L K A Sbjct: 566 ADHHEQAKLIMSLLRPGYELD-KLLVLDIEGNNMALSSKYSLIKLAEELPSDFNQLQPNS 624 Query: 366 RVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAE 425 V G + ++ + G F+ G + G S + + + + G + A ++ V+ E Sbjct: 625 VVHGYVCNLIENGCFVRFLGRLTGFAPRSK-AIDDPKADVSESFFVGQSVRANIVDVNQE 683 Query: 426 RERISLGVKQLAEDPFN---------------------------NWVALNKKGAIVTGKV 458 + RI+L +KQ + + +WV G+++ G + Sbjct: 684 KSRITLSLKQSSCASVDASFVQEYFLMDEKISDLQSSDITKSDCSWVEKFSIGSLIKGTI 743 Query: 459 TAVDAKGATVELAD--GVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAIS 516 + G V + V G++ L G V A + R R + Sbjct: 744 QEQNDLGVVVNFDNINNVLGFIPQHHMG-------GATLVPGSVVNAVVLDISRAERLVD 796 Query: 517 LSVRAKDEADEKDAIATVNKQE 538 LS+R + + ++ +K++ Sbjct: 797 LSLRPELLNNLTKEVSNSSKKK 818 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 103/610 (16%), Positives = 213/610 (34%), Gaps = 105/610 (17%) Query: 15 EIETRPGSIVRGVVVAIDKDVVLVDA---GLKSESAIPAEQF-KNAQGELEIQVGDEVDV 70 E V VV + + +++ G + + + G V Sbjct: 824 SKELEVHQRVSAVVEIVKEQHLVLSIPEHGY-TIGYASVSDYNTQKLPVKQFSTGQSVVA 882 Query: 71 ALDAVEDG-------------FGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVK 117 ++ AV++ G + SR K + ++ + E V +N Sbjct: 883 SVKAVQNPLTSGRLLLLLDSVSGTSETSRSKRAKKKS------SCEVGSVVHAEVND--- 933 Query: 118 GGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIK----LDQKRNNVV--VSRR 171 S D + G+ + +V+ D K+ + + Sbjct: 934 ---------------ASTSDEPFAK---FRVGQSISARVVAKPCHTDIKKTQLWELSVKP 975 Query: 172 AVIESENSAERDQLLENLQ--EGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMA--WK 226 A+++ + Q E L+ G V G V + ++ + V + I D + Sbjct: 976 AMLKDSSEFNDTQESEQLEFAAGQCVIGYVYKVDKEWVWLAVSRNVTARIFILDTSCKAH 1035 Query: 227 RVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLG----------------ED---PW 267 ++ +G ++ VL +++E+ + L + L D P Sbjct: 1036 ELEEFERRFPIGKAVSGYVLTYNKEKKTLRLVQRPLLFIHKSIANGGGSKTDKPDSSIPG 1095 Query: 268 VAIAKRYPEGTKLTGRVTNLTDY--GCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVG 325 EG L GR++ + G V++ V G VH +E++ + P G Sbjct: 1096 DDDTLFIHEGDILGGRISKILPGVGGLRVQLGPYVFGRVHFTEINDSW-VPDPLDGFREG 1154 Query: 326 DVVEVMVLDIDEERR---RISLGLKQCKAN------------------PWQQFAETHNKG 364 V+ VL+I + +I L L+ + E + Sbjct: 1155 QFVKCKVLEISSSSKGTWQIELSLRTSLDGMSSADHLSEDLKNNDNVCKRFERIEDLSPD 1214 Query: 365 DRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDA 424 V+G +K+ G FI L ++ V LS++ +E +E+ G + VL V+ Sbjct: 1215 MGVQGYVKNTMSKGCFIILSRTVEAKVRLSNLCDTFV-KEPEKEFPVGKLVTGRVLNVEP 1273 Query: 425 ERERISLGVKQLA----EDPFNNWVALNKKGAIVTGKVTAVDAKGATVELAD-GVEGYLR 479 +RI + +K + + + G +++G++ V+ G +++ G+ G Sbjct: 1274 LSKRIEVTLKTVNAGGRPKSESYDLKKLHVGDMISGRIRRVEPFGLFIDIDQTGMVGLCH 1333 Query: 480 ASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQED 539 S+ S DR+E+ G+ V AK +D + + ISL +++ + D A +++ Sbjct: 1334 ISQLSDDRMENVQARYKAGESVRAKILKLDEEKKRISLGMKSSYLMNGDDDKAQPLSEDN 1393 Query: 540 ANFSNNAMAE 549 + + + + Sbjct: 1394 TSMECDPIND 1403 Score = 155 bits (391), Expect = 6e-36, Method: Composition-based stats. Identities = 85/548 (15%), Positives = 182/548 (33%), Gaps = 41/548 (7%) Query: 7 QLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKS-ESAIPAEQFKNAQGELEIQVG 65 L + + G + V +I+ ++ GL S I + E ++ G Sbjct: 84 SLLHKGFSFDSFQLGMVFSANVKSIEDHGSILHFGLPSITGFIEISD--DGNQESGMKTG 141 Query: 66 DEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTG-----VINGKVKGG- 119 + + ++ LS + + + G + ++ G Sbjct: 142 QLIQGVVTKIDRDRKIVHLSSDPDSVAKCLTKDLSGMSFDLLIPGMMVNARVQSVLENGI 201 Query: 120 ---FTVELNG-IRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIE 175 F NG + F + + + +D + + K + +++ +D V ++ + Sbjct: 202 LFDFLTYFNGTVDLFHLKNPLSNKSWKDEYN-QNKTVNARILFIDPSSRAVGLTLSPHVV 260 Query: 176 SENSAERDQLLENLQEGMEV-KGIVKNLTDYGAFVDLGGVDGLLHI--TDMAWKRVKHPS 232 + G + V + G ++L D A V Sbjct: 261 CNKAPPLHVF-----SGDIFDEAKVVRIDKSGLLLELPSKPTPTPAYTYDAAGDEVTKLE 315 Query: 233 EIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGC 292 + G+ I V+VL + LK+ + V G +V ++ +G Sbjct: 316 KKFKEGNHIRVRVLGLKQMEGLAVGTLKESAFEGPVFTHSDVKPGMVTKAKVISVDTFGA 375 Query: 293 FVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN 352 V+ G++ + + M + P K VG + VL + +RI++ K+ Sbjct: 376 IVQFSGGLKAMCPLRHMSEF-EVTKPRKKFKVGAELVFRVLGC--KSKRITVTYKKTLVK 432 Query: 353 ---PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREY 409 P +G G I I G F+ G+ G V ++ G + + Sbjct: 433 SKLPILSSYTDATEGLVTHGWITKIEKHGCFVRFYNGVQGFVPRFELGLE-PGSDPDSVF 491 Query: 410 KKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVE 469 G+ + V +RI+L + + + K G+IV+G + + ++ V Sbjct: 492 HVGEVVKCRVTSAVHGTQRITLSF--MIKPSSVSEDDSIKLGSIVSGIIDTITSQAVIVR 549 Query: 470 LADG--VEGYLRASEASRDRVED--ATLVLSVGDEVEAKFTGVDRKNRAISLS-----VR 520 + V+G + A + + +L G E++ K +D + ++LS ++ Sbjct: 550 VKSKSVVKGTISAEHLADHHEQAKLIMSLLRPGYELD-KLLVLDIEGNNMALSSKYSLIK 608 Query: 521 AKDEADEK 528 +E Sbjct: 609 LAEELPSD 616 Score = 151 bits (381), Expect = 8e-35, Method: Composition-based stats. Identities = 95/553 (17%), Positives = 189/553 (34%), Gaps = 80/553 (14%) Query: 13 LKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ---GELEIQVGDEVD 69 + +PG + + V+++D +V ++ P + + +VG E+ Sbjct: 352 FTHSDVKPGMVTKAKVISVDTFGAIVQFSGGLKAMCPLRHMSEFEVTKPRKKFKVGAELV 411 Query: 70 VALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL-NGIR 128 + + + K ++ + G I K G V NG++ Sbjct: 412 FRVLGCKSKRITVTYKKTLVKSKLPILSSYTDATEGLVTHGWITKIEKHGCFVRFYNGVQ 471 Query: 129 AFLPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLL 186 F+P + + P D + G+ ++ +V + + + + +S D Sbjct: 472 GFVPRFELGLEPGSDPDSVFHVGEVVKCRVTSAVHGTQRITL---SFMIKPSSVSED--- 525 Query: 187 ENLQEGMEVKGIVKNLTDYGAFVDLGG---VDGLLHITDMAWKR--VKHPSEIVNVGDEI 241 ++++ G V GI+ +T V + V G + +A K ++ G E+ Sbjct: 526 DSIKLGSIVSGIIDTITSQAVIVRVKSKSVVKGTISAEHLADHHEQAKLIMSLLRPGYEL 585 Query: 242 TVKVLKFDRERTRVSLG-----LKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI 296 K+L D E ++L +K E P + + + G V NL + GCFV Sbjct: 586 D-KLLVLDIEGNNMALSSKYSLIKLAEELPSD--FNQLQPNSVVHGYVCNLIENGCFVRF 642 Query: 297 EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQ- 355 + G S+ + S+ VG V ++D+++E+ RI+L LKQ Sbjct: 643 LGRLTGFAPRSK-AIDDPKADVSESFFVGQSVRANIVDVNQEKSRITLSLKQSSCASVDA 701 Query: 356 --------------------------QFAETHNKGDRVEGKIKSITDFGIFIGLD--GGI 387 + E + G ++G I+ D G+ + D + Sbjct: 702 SFVQEYFLMDEKISDLQSSDITKSDCSWVEKFSIGSLIKGTIQEQNDLGVVVNFDNINNV 761 Query: 388 DGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQ-----LAEDPFN 442 G + + G + AVVL + + L ++ L ++ N Sbjct: 762 LGFIPQHHMG--------GATLVPGSVVNAVVLDISRAERLVDLSLRPELLNNLTKEVSN 813 Query: 443 NWVALNKKG--------AIVTGKVTAVDAKGATVELADG--VEGYLRASEASRDRVEDAT 492 + K+G V+ V V + + + + GY S+ + ++ Sbjct: 814 SSKKKRKRGISKELEVHQRVSAVVEIVKEQHLVLSIPEHGYTIGYASVSDYNTQKL--PV 871 Query: 493 LVLSVGDEVEAKF 505 S G V A Sbjct: 872 KQFSTGQSVVASV 884 Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats. Identities = 83/431 (19%), Positives = 152/431 (35%), Gaps = 28/431 (6%) Query: 110 GVINGKVKGGFTVEL-NGIRAFLPGSLVDV---RPVRDTLH-------LEGKELEFKVIK 158 GV+ + + L G+R + S V R + D + G+ + V++ Sbjct: 5 GVVTEVNQKDIVISLPGGLRGLVRASEVSDFTDRGIEDDENELLGDIFSVGQLVPCIVLE 64 Query: 159 LDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG--GVDG 216 LD + + + + + ++ Q GM VK++ D+G+ + G + G Sbjct: 65 LDDDKKEAGKRKIWLSLRLSLLHKGFSFDSFQLGMVFSANVKSIEDHGSILHFGLPSITG 124 Query: 217 LLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLG------LKQLGEDPWVAI 270 + I+D + + G I V K DR+R V L K L +D Sbjct: 125 FIEISD-----DGNQESGMKTGQLIQGVVTKIDRDRKIVHLSSDPDSVAKCLTKDLSGMS 179 Query: 271 AKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEV 330 G + RV ++ + G + G V + + N N V Sbjct: 180 FDLLIPGMMVNARVQSVLENGILFDFLTYFNGTVDLFHLKNPLSNKSWKDEYNQNKTVNA 239 Query: 331 MVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGL 390 +L ID R + L L + E K+ I G+ + L Sbjct: 240 RILFIDPSSRAVGLTLSPHVVCNKAPPLHVFSGDIFDEAKVVRIDKSGLLLELPSKPTPT 299 Query: 391 VHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLA-EDPFNNWVALNK 449 + + + +++K+G+ I VL + +K+ A E P + K Sbjct: 300 PAYTYDAAGDEVTKLEKKFKEGNHIRVRVLGLKQMEGLAVGTLKESAFEGPVFT-HSDVK 358 Query: 450 KGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVD 509 G + KV +VD GA V+ + G++ S V VG E+ + G Sbjct: 359 PGMVTKAKVISVDTFGAIVQFSGGLKAMCPLRHMSEFEVTKPRKKFKVGAELVFRVLGC- 417 Query: 510 RKNRAISLSVR 520 K++ I+++ + Sbjct: 418 -KSKRITVTYK 427 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 92/587 (15%), Positives = 195/587 (33%), Gaps = 109/587 (18%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQGELEIQVGDEVDVALD 73 + +P S+V G V + ++ V + P + + A VG V + Sbjct: 619 QLQPNSVVHGYVCNLIENGCFVRFLGRLTGFAPRSKAIDDPKADVSESFFVGQSVRANIV 678 Query: 74 AVEDGFGETLLSREKA--------------------------KRHEAWITLEKAYEDAET 107 V LS +++ ++ + + + Sbjct: 679 DVNQEKSRITLSLKQSSCASVDASFVQEYFLMDEKISDLQSSDITKSDCSWVEKFSIGSL 738 Query: 108 VTGVINGKVKGGFTVE---LNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRN 164 + G I + G V +N + F+P + + G + V+ + + Sbjct: 739 IKGTIQEQNDLGVVVNFDNINNVLGFIPQHHMGG-----ATLVPGSVVNAVVLDISRAER 793 Query: 165 NVVVSRRAVI---------ESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL---G 212 V +S R + S + + + L+ V +V+ + + + + G Sbjct: 794 LVDLSLRPELLNNLTKEVSNSSKKKRKRGISKELEVHQRVSAVVEIVKEQHLVLSIPEHG 853 Query: 213 GVDGLLHITDMAWKRVKHPSEIVNVGDEI--TVKVLKFDRERTRVSLGLKQLGEDPWVAI 270 G ++D + K P + + G + +VK ++ R+ L L + + Sbjct: 854 YTIGYASVSD--YNTQKLPVKQFSTGQSVVASVKAVQNPLTSGRLLLLLDSVSGTSETSR 911 Query: 271 AKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEV 330 +KR K + V ++ VH E++ + + P VG + Sbjct: 912 SKRAK--KKSSCEVGSV----------------VHA-EVNDASTSDEPFAKFRVGQSISA 952 Query: 331 MVL----DIDEERRRI-SLGLKQCKANPWQQFAET-------HNKGDRVEGKIKSITDFG 378 V+ D ++ ++ L +K +F +T G V G + + Sbjct: 953 RVVAKPCHTDIKKTQLWELSVKPAMLKDSSEFNDTQESEQLEFAAGQCVIGYVYKVDKEW 1012 Query: 379 IFIGLDGGIDGLVHLSDISWN-VAGEEAVREYKKGDEIAAVVLQVDAERERISL------ 431 +++ + + + + D S EE R + G ++ VL + E++ + L Sbjct: 1013 VWLAVSRNVTARIFILDTSCKAHELEEFERRFPIGKAVSGYVLTYNKEKKTLRLVQRPLL 1072 Query: 432 ----------GVKQLAED---PFNNWVALNKKGAIVTGKVTAVDA--KGATVELADGVEG 476 G K D P ++ +G I+ G+++ + G V+L V G Sbjct: 1073 FIHKSIANGGGSKTDKPDSSIPGDDDTLFIHEGDILGGRISKILPGVGGLRVQLGPYVFG 1132 Query: 477 YLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNR---AISLSVR 520 + +E + V D G V+ K + ++ I LS+R Sbjct: 1133 RVHFTEINDSWVPDPLDGFREGQFVKCKVLEISSSSKGTWQIELSLR 1179 Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 97/579 (16%), Positives = 191/579 (32%), Gaps = 86/579 (14%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE---IQVGDEVDVALD 73 + G + G + I+K V + +P + G VG+ V + Sbjct: 443 DATEGLVTHGWITKIEKHGCFVRFYNGVQGFVPRFELGLEPGSDPDSVFHVGEVVKCRVT 502 Query: 74 AVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNG---IRAF 130 + G LS + ++ + + + V+G+I+ V + ++ Sbjct: 503 SAVHGTQRITLS---FMIKPSSVSEDDSIKLGSIVSGIIDTITSQAVIVRVKSKSVVKGT 559 Query: 131 LPGSLVDVRPVRDTLHL----EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLL 186 + + + L + G EL+ K++ LD + NN+ +S + + + + E Sbjct: 560 ISAEHLADHHEQAKLIMSLLRPGYELD-KLLVLDIEGNNMALSSKYSL-IKLAEELPSDF 617 Query: 187 ENLQEGMEVKGIVKNLTDYGAFVD-LGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKV 245 LQ V G V NL + G FV LG + G + SE VG + + Sbjct: 618 NQLQPNSVVHGYVCNLIENGCFVRFLGRLTGFAPRSKAIDDPKADVSESFFVGQSVRANI 677 Query: 246 LKFDRERTRVSLGLKQLGEDPWV---------------------------AIAKRYPEGT 278 + ++E++R++L LKQ + +++ G+ Sbjct: 678 VDVNQEKSRITLSLKQSSCASVDASFVQEYFLMDEKISDLQSSDITKSDCSWVEKFSIGS 737 Query: 279 KLTGRVTNLTDYGCFVEIEE--GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDID 336 + G + D G V + V G + M + G VV +VLDI Sbjct: 738 LIKGTIQEQNDLGVVVNFDNINNVLGFIPQHHMGGA--------TLVPGSVVNAVVLDIS 789 Query: 337 EERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSI---TDFGIFIGLDGGIDGLVHL 393 R + L L+ N + +K R G K + + + ++ + Sbjct: 790 RAERLVDLSLRPELLNNLTKEVSNSSKKKRKRGISKELEVHQRVSAVVEIVKEQHLVLSI 849 Query: 394 SD---------ISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNW 444 + +S + V+++ G + A V + ++P + Sbjct: 850 PEHGYTIGYASVSDYNTQKLPVKQFSTGQSVVASV---------------KAVQNPLTSG 894 Query: 445 VALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAK 504 L V+G +K A + + V + A ++ VG + A+ Sbjct: 895 RLLLLL-DSVSGTSETSRSKRAKKKSSCEVGSVVHAEVNDASTSDEPFAKFRVGQSISAR 953 Query: 505 FT----GVDRKNRAIS-LSVRAKDEADEKDAIATVNKQE 538 D K + LSV+ D + T ++ Sbjct: 954 VVAKPCHTDIKKTQLWELSVKPAMLKDSSEFNDTQESEQ 992 Score = 70.4 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 34/196 (17%), Positives = 80/196 (40%), Gaps = 26/196 (13%) Query: 365 DRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISW-------NVAGEEAVREYKKGDEIAA 417 ++ G + + I I L GG+ GLV S++S + E + G + Sbjct: 1 MKLLGVVTEVNQKDIVISLPGGLRGLVRASEVSDFTDRGIEDDENELLGDIFSVGQLVPC 60 Query: 418 VVLQVDAE-----RERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELA- 471 +VL++D + + +I L ++ ++ + G + + V +++ G+ + Sbjct: 61 IVLELDDDKKEAGKRKIWLSLRLSLLHKGFSF-DSFQLGMVFSANVKSIEDHGSILHFGL 119 Query: 472 DGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAI 531 + G++ E S D + + G ++ T +DR + + LS + D++ Sbjct: 120 PSITGFI---EISDDGNQ--ESGMKTGQLIQGVVTKIDRDRKIVHLS-------SDPDSV 167 Query: 532 ATVNKQEDANFSNNAM 547 A ++ + S + + Sbjct: 168 AKCLTKDLSGMSFDLL 183 >UniRef50_UPI00018545D5 30S ribosomal protein S1 n=2 Tax=Helicobacter pylori RepID=UPI00018545D5 Length = 283 Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats. Identities = 69/254 (27%), Positives = 137/254 (53%), Gaps = 9/254 (3%) Query: 21 GSIVRGVVVAIDKD--VVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDG 78 G+I G++V+I+++ +V G K+E + + + +G+L Q D + V + E G Sbjct: 34 GTIKEGLIVSINENDGYAMVSVGGKTEGRLALSEITDEKGQLLYQKNDPIIVHV--SEKG 91 Query: 79 FGETLLSREKAKRHEAWITLEKAYED--AETVTGVINGKVKGGFTVELNGIRAFLPGSLV 136 ++ ++ + + +E+ E+ + G I GK KGG+ VE G+ FL S Sbjct: 92 EHPSVSYKKAISQQKIQAKIEELGENYENAIIEGKIVGKNKGGYIVESQGVEYFLSRSHS 151 Query: 137 DVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVK 196 + ++ + GK ++ +I++D++ +++ +SR+ E + + + E L+ V Sbjct: 152 SL---KNDANHIGKRIKACIIRVDKENHSINISRKRFFEVNDKRQLEVSKELLEATEPVL 208 Query: 197 GIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVS 256 G+V+ +T +G FV+ G++GL+H ++++ K +P + GDE+ VK + +D E+ R+S Sbjct: 209 GVVRQITPFGIFVEAKGIEGLVHYSEISHKGPVNPEKYYKEGDEVYVKAIAYDAEKRRLS 268 Query: 257 LGLKQLGEDPWVAI 270 L +K EDPW I Sbjct: 269 LSIKATIEDPWEEI 282 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 61/264 (23%), Positives = 113/264 (42%), Gaps = 26/264 (9%) Query: 192 GMEVKGIVKNLTDY--GAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKF 248 G +G++ ++ + A V +GG +G L ++++ ++ + D I ++ Sbjct: 34 GTIKEGLIVSINENDGYAMVSVGGKTEGRLALSEITDEKGQLL---YQKNDPI---IVHV 87 Query: 249 DRERTRVSLGLKQLGEDPWVAIA----KRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLV 304 + S+ K+ + E + G++ G VE +GVE + Sbjct: 88 SEKGEHPSVSYKKAISQQKIQAKIEELGENYENAIIEGKIVGKNKGGYIVE-SQGVEYFL 146 Query: 305 HVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQ----CKANPWQQFAET 360 S N H +G ++ ++ +D+E I++ K+ + E Sbjct: 147 SRSHSSLKNDANH------IGKRIKACIIRVDKENHSINISRKRFFEVNDKRQLEVSKEL 200 Query: 361 HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL 420 + V G ++ IT FGIF+ GI+GLVH S+IS + + YK+GDE+ + Sbjct: 201 LEATEPVLGVVRQITPFGIFVE-AKGIEGLVHYSEIS-HKGPVNPEKYYKEGDEVYVKAI 258 Query: 421 QVDAERERISLGVKQLAEDPFNNW 444 DAE+ R+SL +K EDP+ Sbjct: 259 AYDAEKRRLSLSIKATIEDPWEEI 282 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 56/263 (21%), Positives = 98/263 (37%), Gaps = 25/263 (9%) Query: 277 GTKLTGRVTNLTDYG--CFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLD 334 GT G + ++ + V + EG + +SE+ + + D + ++ Sbjct: 34 GTIKEGLIVSINENDGYAMVSVGGKTEGRLALSEITDEKGQL----LYQKNDPI---IVH 86 Query: 335 IDEERRRISLGLKQC----KANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGL 390 + E+ S+ K+ K + + + +EGKI G + G++ Sbjct: 87 VSEKGEHPSVSYKKAISQQKIQAKIEELGENYENAIIEGKIVGKNKGGYIVE-SQGVEYF 145 Query: 391 VHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAE----DPFNNWVA 446 + S S G I A +++VD E I++ K+ E Sbjct: 146 LSRSHSSLKNDANH------IGKRIKACIIRVDKENHSINISRKRFFEVNDKRQLEVSKE 199 Query: 447 LNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFT 506 L + V G V + G VE A G+EG + SE S + GDEV K Sbjct: 200 LLEATEPVLGVVRQITPFGIFVE-AKGIEGLVHYSEISHKGPVNPEKYYKEGDEVYVKAI 258 Query: 507 GVDRKNRAISLSVRAKDEADEKD 529 D + R +SLS++A E ++ Sbjct: 259 AYDAEKRRLSLSIKATIEDPWEE 281 >UniRef50_Q31C04 SSU ribosomal protein S1P n=6 Tax=Prochlorococcus marinus RepID=Q31C04_PROM9 Length = 404 Score = 187 bits (476), Expect = 8e-46, Method: Composition-based stats. Identities = 67/276 (24%), Positives = 126/276 (45%), Gaps = 14/276 (5%) Query: 6 AQLFEESLKEIET--RPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQGEL 60 F E+L E E G + G V+AI+ D + VD G K+ +P ++ + Sbjct: 116 ESAFLEALNENEPIGATGETISGKVIAIESDGLYVDIGGKAPGYMPKKECGLGVITNFKE 175 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 + +G E++V + ++ G +S ++W + + ++ E + +ING +GG Sbjct: 176 KFSIGLEMEVLVIKEQNADGMVTVSARALILRQSWEKVSNSAKNGELIDVLINGFNRGGL 235 Query: 121 TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 T +++G+R F+P S ++ +D GK L+ ++++ + +V+S + A Sbjct: 236 TCDVDGLRGFIPRSQLE--DGQDYQSFVGKTLKVAFLEVNPESRKLVLSEK-------KA 286 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 L +L G ++G V + YG F+DLGG GLLH + + ++ EI G+ Sbjct: 287 SLVSKLTSLDLGQLIEGEVLAVKPYGFFIDLGGASGLLHQSSLTKGSIRSLREIFREGEI 346 Query: 241 ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPE 276 I + + D E+ R+ L L I + Sbjct: 347 IKALISEIDLEKGRIGLNTALLENSAGELIIDKEKV 382 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 45/282 (15%), Positives = 106/282 (37%), Gaps = 12/282 (4%) Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDID 336 G ++G+V + G +V+I G + E + + ++G +EV+V+ Sbjct: 133 GETISGKVIAIESDGLYVDIGGKAPGYMPKKECGLGV-ITNFKEKFSIGLEMEVLVIKEQ 191 Query: 337 EERRRISLGLKQC-KANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSD 395 +++ + W++ + + G+ ++ I G+ +D G+ G + S Sbjct: 192 NADGMVTVSARALILRQSWEKVSNSAKNGELIDVLINGFNRGGLTCDVD-GLRGFIPRSQ 250 Query: 396 ISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVT 455 + + G + L+V+ E ++ L K+ + + + G ++ Sbjct: 251 LEDGQDYQSF-----VGKTLKVAFLEVNPESRKLVLSEKKAS---LVSKLTSLDLGQLIE 302 Query: 456 GKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAI 515 G+V AV G ++L G G L S ++ + + G+ ++A + +D + I Sbjct: 303 GEVLAVKPYGFFIDLG-GASGLLHQSSLTKGSIRSLREIFREGEIIKALISEIDLEKGRI 361 Query: 516 SLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAAKGE 557 L+ + + + I +A F + Sbjct: 362 GLNTALLENSAGELIIDKEKVMREATDRALKTKALFDKKNQD 403 Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats. Identities = 53/256 (20%), Positives = 107/256 (41%), Gaps = 17/256 (6%) Query: 93 EAWITLEKAYEDAETVTGVINGKVKGGFTVELNG-IRAFLPGSLVDVRPVRDTLHL--EG 149 EA E ET++G + G V++ G ++P + + + G Sbjct: 121 EALNENEPIGATGETISGKVIAIESDGLYVDIGGKAPGYMPKKECGLGVITNFKEKFSIG 180 Query: 150 KELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFV 209 E+E VIK V VS RA+I + +++ + + G + ++ G Sbjct: 181 LEMEVLVIKEQNADGMVTVSARALILRQ---SWEKVSNSAKNGELIDVLINGFNRGGLTC 237 Query: 210 DLGGVDGLLHITDMAWKRVKHPSEIVN-VGDEITVKVLKFDRERTRVSLGLKQLGEDPWV 268 D+ G+ G + + + + + + VG + V L+ + E ++ L K+ V Sbjct: 238 DVDGLRGFIPRSQL-----EDGQDYQSFVGKTLKVAFLEVNPESRKLVLSEKKAS---LV 289 Query: 269 AIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVV 328 + G + G V + YG F+++ G GL+H S + + ++ G+++ Sbjct: 290 SKLTSLDLGQLIEGEVLAVKPYGFFIDLG-GASGLLHQSSLTKGSIR-SLREIFREGEII 347 Query: 329 EVMVLDIDEERRRISL 344 + ++ +ID E+ RI L Sbjct: 348 KALISEIDLEKGRIGL 363 >UniRef50_Q0UD83 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum RepID=Q0UD83_PHANO Length = 1794 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 106/569 (18%), Positives = 201/569 (35%), Gaps = 65/569 (11%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA---QGELEIQVGDEVDVALD 73 E G IV G V I D V V+ G A+ Q ++ + + Sbjct: 824 ELTSGEIVHGFVRGILPDKVFVEFGNGVSGAVFKSQMTEEILTAPNFGLRKDQSMTCRIT 883 Query: 74 AVEDGFGETLLSRE--------------------KAKRHEAWITLEKAYEDAETVTGVIN 113 V+ G LS + ++ IT + I Sbjct: 884 YVDPTNGMFWLSMKLEPETNESAAPTPTAPTGTAMTAPVDSKITNTDEINFGTELKVRIR 943 Query: 114 GKVKGGFTVEL-NGIRAFLPGSLVDVR------PVRDTLHL-EGKELEFKVIKLD--QKR 163 VEL ++ + S + R T H + ++ KV+ + Sbjct: 944 SIKSTQINVELAENVQGRISVSELFDSWDDIPDKKRPTAHFQMNQTIKAKVLGRHDARNH 1003 Query: 164 NNVVVSRRAV-------IESENSAERDQ----LLENLQEGMEVKGIVKNLTDYGAFVDLG 212 + ++ R+ + ++N + + L+ + EG V N+ D +V+L Sbjct: 1004 RFLPITHRSSNKTPTFDLTAKNEKLKSEGDVLSLDKVTEGSSYVAFVNNIADRYVWVNLS 1063 Query: 213 -GVDGLLHITDMAWK--RVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVA 269 V G + D+ ++ E VG + V+V D R+ L ++ Sbjct: 1064 ANVRGRVDFLDLTDDLEQLSAVEENFPVGSALKVRVKAVDIAAGRLDLTAASTVTGKTLS 1123 Query: 270 IAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVE 329 +A G L RVT + D V++ E + + + + PS+ GDV+ Sbjct: 1124 LADL-KVGYVLPARVTKIHDASIVVQVNENIAAPIFLERLADDYDKAKPSE-YKQGDVLR 1181 Query: 330 VMVLDIDEERRRISLGLKQCK--------ANPWQQFAETHNKGDRVEGKIKSITDFGIFI 381 V V+++D +++ L + K +P + V G IK I D G+++ Sbjct: 1182 VCVIEVDIPNKKLGLSARPSKVLSSTLPVKDPIIEDKAQLKVHQVVRGFIKKIADNGVYV 1241 Query: 382 GLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL--QVDAERERISLGVKQLAED 439 L ++ V +S++S + ++ + + ++ + D +++L + + Sbjct: 1242 RLGPHVETYVRVSNLSDSYI-KDWKSAFHVDQLVTGKIISNKEDQRNAQMTLKTSTIQGN 1300 Query: 440 PFNNWV-ALNKKGAIVTGKVTAVDAKGAT--VELADGVEGYLRASEASRDRV--EDATLV 494 K G IVT KV V G V+ ++ V G S+ + V + + Sbjct: 1301 YVEILEFGDMKAGQIVTAKVRKVAEFGVFLVVDNSNNVSGLCHVSKLADKPVAKDKIKDM 1360 Query: 495 LSVGDEVEAKFTGVDRKNRAISLSVRAKD 523 GD V+AK V+ R I+ S++ Sbjct: 1361 YKEGDIVKAKVVSVNPTARRINFSLKYSQ 1389 Score = 181 bits (459), Expect = 8e-44, Method: Composition-based stats. Identities = 95/511 (18%), Positives = 190/511 (37%), Gaps = 48/511 (9%) Query: 61 EIQVGDEVDVAL-----------DAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVT 109 + ++G +V + V LS + + + + + Sbjct: 404 KYKIGSKVKARILFTCPDSDPARVGVSLLDHVVALSTRMSGKPKERKPALDLMPISTIID 463 Query: 110 ----GVINGKVKGGFTVELNGIRAFLPGSLVDVRPV----RDTLHLE-GKELEFKVIKLD 160 + + F + + + F S + V D + G +++ + Sbjct: 464 NAKVVKVAPALGAFFELGVRDVLGFAHISRLSDDRVDVLSEDAGAYKLGSTHRARIVGYN 523 Query: 161 QKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNL--TDYGA---FVDL-GGV 214 +S +E + + +E+++ G VKG V L GA V L G+ Sbjct: 524 SIDGLFQLS----LEQKVLDQAFLRIEDIKPGEVVKGKVHKLIADKKGASAVLVHLSDGI 579 Query: 215 DGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGED----PWVAI 270 GL+ +A +++HP G +T +VL + R ++ L LK+ + PW Sbjct: 580 TGLVTEMHLADVKLQHPERKFREGVAVTARVLYTEPARHQIQLTLKKSLVNSDVKPWTDY 639 Query: 271 AKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEV 330 + EG+K G + N+ G V V + V+EM ++ G VV V Sbjct: 640 SM-ISEGSKGPGILVNVLKNGAKVRFYGDVTAWLPVAEMSEAF-MDDATRHFTKGQVVNV 697 Query: 331 MVLDIDEERRRISLGLKQ-CKANPWQQFA-ETHNKGDRVEGKIKSITDFGIFIGLDGGID 388 V+ ++ + R++ + K +P ++ A N G+ +G + +D + L G+ Sbjct: 698 RVISVNAKDRQMLVSCKDPAAVDPNKEAAFNALNPGNVTKGTVLEKSDDVATLDLGHGVK 757 Query: 389 GLVHLSDISWNVAGEEA--VREYKKGDEIAAVVLQVDAERERI-------SLGVKQLAED 439 G++ + ++ ++ +++ + G + +V+ R ++ SL K Sbjct: 758 GVLRIGHLTDGSEKKDISTMKKIRVGGTLEDLVVLNKLLRSKVVTVSNKPSL-RKDAQAS 816 Query: 440 PFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGD 499 V G IV G V + VE +GV G + S+ + + + L Sbjct: 817 KLITNVEELTSGEIVHGFVRGILPDKVFVEFGNGVSGAVFKSQMTEEILTAPNFGLRKDQ 876 Query: 500 EVEAKFTGVDRKNRAISLSVRAKDEADEKDA 530 + + T VD N LS++ + E +E A Sbjct: 877 SMTCRITYVDPTNGMFWLSMKLEPETNESAA 907 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 96/561 (17%), Positives = 197/561 (35%), Gaps = 68/561 (12%) Query: 18 TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDV------- 70 PG++ +G V+ DV +D G + + + + +I ++ V Sbjct: 730 LNPGNVTKGTVLEKSDDVATLDLGHGVKGVLRIGHLTDGSEKKDISTMKKIRVGGTLEDL 789 Query: 71 ALDAVEDGFGETLLS-----REKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL- 124 + +S R+ A+ + +E+ E V G + G + VE Sbjct: 790 VVLNKLLRSKVVTVSNKPSLRKDAQASKLITNVEE-LTSGEIVHGFVRGILPDKVFVEFG 848 Query: 125 NGIRAFLPGSLV--DVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA-- 180 NG+ + S + ++ + + + + ++ +D +S + E+ SA Sbjct: 849 NGVSGAVFKSQMTEEILTAPNFGLRKDQSMTCRITYVDPTNGMFWLSMKLEPETNESAAP 908 Query: 181 ---------------ERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDM- 223 + + + G E+K ++++ V+L V G + ++++ Sbjct: 909 TPTAPTGTAMTAPVDSKITNTDEINFGTELKVRIRSIKSTQINVELAENVQGRISVSELF 968 Query: 224 -AWKRVKH---PSEIVNVGDEITVKVLKFDRERTR---------------VSLGLK--QL 262 +W + P+ + I KVL R L K +L Sbjct: 969 DSWDDIPDKKRPTAHFQMNQTIKAKVLGRHDARNHRFLPITHRSSNKTPTFDLTAKNEKL 1028 Query: 263 GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIH-PSKV 321 + V + EG+ V N+ D +V + V G V ++ + + + Sbjct: 1029 KSEGDVLSLDKVTEGSSYVAFVNNIADRYVWVNLSANVRGRVDFLDLTDDLEQLSAVEEN 1088 Query: 322 VNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFI 381 VG ++V V +D R+ L G + ++ I D I + Sbjct: 1089 FPVGSALKVRVKAVDIAAGRLDLTA-ASTVTGKTLSLADLKVGYVLPARVTKIHDASIVV 1147 Query: 382 GLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLA---- 437 ++ I + L ++ + + EYK+GD + V++VD +++ L + Sbjct: 1148 QVNENIAAPIFLERLADDYDKAKP-SEYKQGDVLRVCVIEVDIPNKKLGLSARPSKVLSS 1206 Query: 438 ----EDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATL 493 +DP A K +V G + + G V L VE Y+R S S ++D Sbjct: 1207 TLPVKDPIIEDKAQLKVHQVVRGFIKKIADNGVYVRLGPHVETYVRVSNLSDSYIKDWKS 1266 Query: 494 VLSVGDEVEAKFTGVDRKNRA 514 V V K +++++ Sbjct: 1267 AFHVDQLVTGKIIS-NKEDQR 1286 Score = 165 bits (417), Expect = 6e-39, Method: Composition-based stats. Identities = 105/562 (18%), Positives = 195/562 (34%), Gaps = 57/562 (10%) Query: 18 TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL---EIQVGDEVDVALDA 74 GS G++V + K+ V + +P + A + G V+V + + Sbjct: 642 ISEGSKGPGILVNVLKNGAKVRFYGDVTAWLPVAEMSEAFMDDATRHFTKGQVVNVRVIS 701 Query: 75 VEDGFGETLLS-REKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFLP 132 V + L+S ++ A A G + K T++L G++ L Sbjct: 702 VNAKDRQMLVSCKDPAAVDPNKEAAFNALNPGNVTKGTVLEKSDDVATLDLGHGVKGVLR 761 Query: 133 -GSLVDVRPVRDTLHL----EGKELE-FKVIKLDQKRNNVVVSRRAVIESENSAERDQL- 185 G L D +D + G LE V+ + V VS + + + A + Sbjct: 762 IGHLTDGSEKKDISTMKKIRVGGTLEDLVVLNKLLRSKVVTVSNKPSLRKDAQASKLITN 821 Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 +E L G V G V+ + FV+ G GV G + + M + + P+ + +T + Sbjct: 822 VEELTSGEIVHGFVRGILPDKVFVEFGNGVSGAVFKSQMTEEILTAPNFGLRKDQSMTCR 881 Query: 245 VLKFDRERTRVSLGLKQLGE---------------------DPWVAIAKRYPEGTKLTGR 283 + D L +K E D + GT+L R Sbjct: 882 ITYVDPTNGMFWLSMKLEPETNESAAPTPTAPTGTAMTAPVDSKITNTDEINFGTELKVR 941 Query: 284 VTNLTDYGCFVEIEEGVEGLVHVSEM--DWTN--KNIHPSKVVNVGDVVEVMVLDIDEER 339 + ++ VE+ E V+G + VSE+ W + P+ + ++ VL + R Sbjct: 942 IRSIKSTQINVELAENVQGRISVSELFDSWDDIPDKKRPTAHFQMNQTIKAKVLGRHDAR 1001 Query: 340 RRISL------GLKQCKANPWQQFAETHNKGDRVE-GKIKSITDFGIFIG---------- 382 L K + + + ++GD + K+ + + F+ Sbjct: 1002 NHRFLPITHRSSNKTPTFDLTAKNEKLKSEGDVLSLDKVTEGSSYVAFVNNIADRYVWVN 1061 Query: 383 LDGGIDGLVHLSDISWNVAGEEAVRE-YKKGDEIAAVVLQVDAERERISLGVKQLAEDPF 441 L + G V D++ ++ AV E + G + V VD R+ L Sbjct: 1062 LSANVRGRVDFLDLTDDLEQLSAVEENFPVGSALKVRVKAVDIAAGRLDLTAASTVTGKT 1121 Query: 442 NNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEV 501 + L K G ++ +VT + V++ + + + + D + GD + Sbjct: 1122 LSLADL-KVGYVLPARVTKIHDASIVVQVNENIAAPIFLERLADDYDKAKPSEYKQGDVL 1180 Query: 502 EAKFTGVDRKNRAISLSVRAKD 523 VD N+ + LS R Sbjct: 1181 RVCVIEVDIPNKKLGLSARPSK 1202 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 110/575 (19%), Positives = 212/575 (36%), Gaps = 45/575 (7%) Query: 7 QLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGL---KSESAIPAEQFKNAQGELEIQ 63 +L + L + + S+V+ VV+ + +++D GL K + +P + ++Q Sbjct: 252 KLVNKGLSKRKMPINSMVQASVVSNEDHGLVMDLGLDDSKIKGFLPKGELGPKIQHSKVQ 311 Query: 64 VGDEVDVALDAVEDGFGETLLS--REKAKRHEAWITLEKA-----YEDAETVTGVINGKV 116 G + + LS KA TL +A + V ++ Sbjct: 312 EGAVFMCLVTGLNSDGRIVKLSADHSKAGNLAKGNTLTEAPTIDVFLPGTAVDVLVADTT 371 Query: 117 KGGFTVELNGI-RAFLPGSLVD-VRPVRDT--LHLEGKELEFKVI----KLDQKRNNVVV 168 T ++ G+ A D + G +++ +++ D R V + Sbjct: 372 ASTLTGKILGLADATADAYHSGATEKGGDVAQKYKIGSKVKARILFTCPDSDPARVGVSL 431 Query: 169 SRRAVIESEN----SAERDQLLENLQEGMEVK-GIVKNLTD-YGAFVDLG--GVDGLLHI 220 V S ER L+ + + V + GAF +LG V G HI Sbjct: 432 LDHVVALSTRMSGKPKERKPALDLMPISTIIDNAKVVKVAPALGAFFELGVRDVLGFAHI 491 Query: 221 TDMAWKRVKHPSE---IVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEG 277 + ++ RV SE +G +++ ++ L L+Q D + G Sbjct: 492 SRLSDDRVDVLSEDAGAYKLGSTHRARIVGYNSIDGLFQLSLEQKVLDQAFLRIEDIKPG 551 Query: 278 TKLTGRVTNL--TDYGC---FVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMV 332 + G+V L G V + +G+ GLV + K HP + G V V Sbjct: 552 EVVKGKVHKLIADKKGASAVLVHLSDGITGLVTEMHLA-DVKLQHPERKFREGVAVTARV 610 Query: 333 LDIDEERRRISLGLKQCKANPWQQFAETH---NKGDRVEGKIKSITDFGIFIGLDGGIDG 389 L + R +I L LK+ N + + ++G + G + ++ G + G + Sbjct: 611 LYTEPARHQIQLTLKKSLVNSDVKPWTDYSMISEGSKGPGILVNVLKNGAKVRFYGDVTA 670 Query: 390 LVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQ-LAEDP-FNNWVAL 447 + ++++S ++A R + KG + V+ V+A+ ++ + K A DP Sbjct: 671 WLPVAEMSEAFM-DDATRHFTKGQVVNVRVISVNAKDRQMLVSCKDPAAVDPNKEAAFNA 729 Query: 448 NKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVED---ATLVLSVGDEVE-A 503 G + G V AT++L GV+G LR + + + VG +E Sbjct: 730 LNPGNVTKGTVLEKSDDVATLDLGHGVKGVLRIGHLTDGSEKKDISTMKKIRVGGTLEDL 789 Query: 504 KFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQE 538 +++ +++S + D + + N +E Sbjct: 790 VVLNKLLRSKVVTVSNKPSLRKDAQASKLITNVEE 824 Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats. Identities = 106/611 (17%), Positives = 208/611 (34%), Gaps = 81/611 (13%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPA-------------------- 50 E L + PG+I+ G V + +++ +P Sbjct: 141 EGLNYKKLTPGTIILGQVTDVSHQDIVLALPNNLVGYVPLTAVSDKLNERLEKLLKEEED 200 Query: 51 ---------EQFKNAQGELEIQVGDEVDVALDAVEDGFGETL----LSREKAKRHEAWIT 97 E F++ E +G + + A D LS E ++ Sbjct: 201 GADIAEDEDESFEDVHLEDMFTIGQYMRACVTATTDDSARARKRLELSIEPKLVNKGLSK 260 Query: 98 LEKAYEDAETVTGVINGKVKGGFTVELN----GIRAFLPGSLVDVRPVRDTLHLEGKELE 153 + V + G ++L I+ FLP + + ++ + EG Sbjct: 261 --RKMPINSMVQASVVSNEDHGLVMDLGLDDSKIKGFLPKGELGPK-IQHSKVQEGAVFM 317 Query: 154 FKVIKLDQKRNNVVVSRRAV----IESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFV 209 V L+ V +S + N+ ++ G V +V + T Sbjct: 318 CLVTGLNSDGRIVKLSADHSKAGNLAKGNTLTEAPTIDVFLPGTAVDVLVADTTASTLT- 376 Query: 210 DLGGVDGLLHITDMAWK-----RVKHPSEIVNVGDEITVKVLKF--DRERTRVSLGL--- 259 G + GL T A+ + ++ +G ++ ++L D + RV + L Sbjct: 377 --GKILGLADATADAYHSGATEKGGDVAQKYKIGSKVKARILFTCPDSDPARVGVSLLDH 434 Query: 260 -----KQLGEDPWVAIAK---RYPEGTKLTGRVTNLTD-YGCFVEIE-EGVEGLVHVSEM 309 ++ P +V + G F E+ V G H+S + Sbjct: 435 VVALSTRMSGKPKERKPALDLMPISTIIDNAKVVKVAPALGAFFELGVRDVLGFAHISRL 494 Query: 310 DWTNKNIHPSKV--VNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRV 367 ++ +G ++ + L L+Q + E G+ V Sbjct: 495 SDDRVDVLSEDAGAYKLGSTHRARIVGYNSIDGLFQLSLEQKVLDQAFLRIEDIKPGEVV 554 Query: 368 EGKIKSIT--DFGI---FIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQV 422 +GK+ + G + L GI GLV ++ +V + R++++G + A VL Sbjct: 555 KGKVHKLIADKKGASAVLVHLSDGITGLVTEMHLA-DVKLQHPERKFREGVAVTARVLYT 613 Query: 423 DAERERISLGVKQLAED----PFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYL 478 + R +I L +K+ + P+ ++ ++ +G+ G + V GA V V +L Sbjct: 614 EPARHQIQLTLKKSLVNSDVKPWTDY-SMISEGSKGPGILVNVLKNGAKVRFYGDVTAWL 672 Query: 479 RASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQE 538 +E S ++DAT + G V + V+ K+R + +S + A + + A N Sbjct: 673 PVAEMSEAFMDDATRHFTKGQVVNVRVISVNAKDRQMLVSCKDPA-AVDPNKEAAFNALN 731 Query: 539 DANFSNNAMAE 549 N + + E Sbjct: 732 PGNVTKGTVLE 742 Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats. Identities = 73/444 (16%), Positives = 131/444 (29%), Gaps = 48/444 (10%) Query: 148 EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGA 207 G+ + V R + + + V+ V + D+G Sbjct: 223 IGQYMRACVTATTDDSARAR-KRLELSIEPKLVNKGLSKRKMPINSMVQASVVSNEDHGL 281 Query: 208 FVDLG----GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGL---K 260 +DLG + G L ++ K V G V + + V L K Sbjct: 282 VMDLGLDDSKIKGFLPKGELG---PKIQHSKVQEGAVFMCLVTGLNSDGRIVKLSADHSK 338 Query: 261 Q--------LGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWT 312 L E P + + L T T G + + + H T Sbjct: 339 AGNLAKGNTLTEAPTIDVFLPGTAVDVLVADTTASTLTGKILGLADATADAYHS---GAT 395 Query: 313 NKNIHPSKVVNVGDVVEVMVL----DIDEERRRISL-----------GLKQCKANPWQQF 357 K ++ +G V+ +L D D R +SL K + P Sbjct: 396 EKGGDVAQKYKIGSKVKARILFTCPDSDPARVGVSLLDHVVALSTRMSGKPKERKPALDL 455 Query: 358 AETHNKGDRVEGKIKSITD-FGIFIGLD-GGIDGLVHLSDISWNVAG--EEAVREYKKGD 413 K+ + G F L + G H+S +S + E YK G Sbjct: 456 MPISTI--IDNAKVVKVAPALGAFFELGVRDVLGFAHISRLSDDRVDVLSEDAGAYKLGS 513 Query: 414 EIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDA-----KGATV 468 A ++ ++ L ++Q D + K G +V GKV + A V Sbjct: 514 THRARIVGYNSIDGLFQLSLEQKVLDQAFLRIEDIKPGEVVKGKVHKLIADKKGASAVLV 573 Query: 469 ELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEK 528 L+DG+ G + + +++ G V A+ + I L+++ + Sbjct: 574 HLSDGITGLVTEMHLADVKLQHPERKFREGVAVTARVLYTEPARHQIQLTLKKSLVNSDV 633 Query: 529 DAIATVNKQEDANFSNNAMAEAFK 552 + + + + K Sbjct: 634 KPWTDYSMISEGSKGPGILVNVLK 657 Score = 50.7 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 23/171 (13%), Positives = 63/171 (36%), Gaps = 12/171 (7%) Query: 13 LKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL---EIQVGDEVD 69 + + + +VRG + I + V V G E+ + ++ + V V Sbjct: 1216 EDKAQLKVHQVVRGFIKKIADNGVYVRLGPHVETYVRVSNLSDSYIKDWKSAFHVDQLVT 1275 Query: 70 VALDAVEDGFGETLLSREKAKRHEAWITLEK--AYEDAETVTGVINGKVKGG--FTVE-L 124 + + ++ ++ + + ++ + + + + VT + + G V+ Sbjct: 1276 GKIISNKEDQRNAQMTLKTSTIQGNYVEILEFGDMKAGQIVTAKVRKVAEFGVFLVVDNS 1335 Query: 125 NGIRAFLPGSLVDVRPVR----DTLHLEGKELEFKVIKLDQKRNNVVVSRR 171 N + S + +PV ++ EG ++ KV+ ++ + S + Sbjct: 1336 NNVSGLCHVSKLADKPVAKDKIKDMYKEGDIVKAKVVSVNPTARRINFSLK 1386 >UniRef50_B9WAR4 rRNA biogenesis protein, putative n=5 Tax=Saccharomycetales RepID=B9WAR4_CANDC Length = 1715 Score = 185 bits (469), Expect = 5e-45, Method: Composition-based stats. Identities = 107/573 (18%), Positives = 226/573 (39%), Gaps = 66/573 (11%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQF-KNAQGELEIQ--VGDEVDVALD 73 + ++V+G V ++ + V + I A+ KNA+ +L + ++ + Sbjct: 766 DVTVNAVVKGYVKSVTSLGLFVTFTGRLTGLILAKYVTKNAKEDLSKKFYKYQSINCRVL 825 Query: 74 AVEDGFGETLL-------SREKAKRH-----EAWITLEKAYEDAETVTGVINGKVKGGFT 121 +V+ LL S K + + Y+ ET VI Sbjct: 826 SVDKENERFLLALNNSSSSFTKDDEQLIKPIDTTKKIVADYQPGETTKAVIRAVKGTQLN 885 Query: 122 VEL-NGIRAFLPGSLV--DVRPVRDT------LHLEGKELEFKVIKLDQKRNNVVVS--- 169 V+L + ++ + + ++ +++ +G+ ++ KVI + +N+ + Sbjct: 886 VQLADNLQGRVDITQCFNSIKDIKNLHQPLASRFQKGETVDVKVIGVHDAKNHTFLPITH 945 Query: 170 ----RRAVIE-------SENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGL 217 R ++E N D L++ ++G E+ V N+ + +V + + G Sbjct: 946 RKSNRTTILELSLTNPQINNKPLTDLKLKDFKQGDELLAFVNNIINGMVWVSISPSIKGR 1005 Query: 218 LHITDMAWKR--VKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYP 275 + + D+ + + +G+ I VKV + D + + L ++ ++ + Sbjct: 1006 ISMLDLTEDGSIFQDIDNKLPIGNAINVKVKQVDLQHQILVLTARE----NFIEKFEDVK 1061 Query: 276 EGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDW--TNKNIHPSKVVNVGDVVEVMVL 333 + R+ + VE+ V + S + + + V NV D V VL Sbjct: 1062 QDEIYPARIIKIKPNHVLVELGNNV---IASSFLTDALDDYSEKLDHVFNVNDYVSAKVL 1118 Query: 334 DIDEERRRISLGLKQCKA--NPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLV 391 DID +RIS+ L+ K + +G ++G +K+I++ G+++ L I LV Sbjct: 1119 DIDSINKRISVSLRTNKPTSDKVINSVGDLTRGQVIKGFVKNISNNGVYVSLGRSIYALV 1178 Query: 392 HLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAED---PFNNWVALN 448 +SD+S + ++ +K + ++ + RI + +K+ + Sbjct: 1179 RVSDLSDSYL-KDWQNFFKPNQPVIGKIVNC-KQEGRILMTLKESEVNGDLKIMKTFDDL 1236 Query: 449 KKGAIVTGKVTAVDAKGATVELAD--GVEGYLRASEASRDRVEDATLVLSVGDEVEAKFT 506 + G I G VT+ G V+L V G SE S + V++ + GD V+ K Sbjct: 1237 QIGDIFEGTVTSTTEFGVFVKLDGTVNVSGLCHHSEISENDVDNVKSLFGTGDRVKVKIL 1296 Query: 507 GVDRKNRAISLSVRAK-------DEADEKDAIA 532 +D R +SL ++A E ++++ +A Sbjct: 1297 KIDPVKRQLSLGMKASYFISDSGKEDNDEEDVA 1329 Score = 178 bits (451), Expect = 7e-43, Method: Composition-based stats. Identities = 103/563 (18%), Positives = 205/563 (36%), Gaps = 55/563 (9%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE---IQVGDEVDVALD 73 + G +V + +V + +P + E ++VG V V + Sbjct: 582 QAEIGFKTNAIVEKFVPNGCIVSFFGNLRAFLPKTEISETFVEDASSYLKVGQIVKVRIL 641 Query: 74 AVEDGFGETLLSREKAKR--HEAWITLEKAYEDAETVTGVINGKVKGGFTVELNG--IRA 129 + +++ +++ + + K V VI K K VEL G +R Sbjct: 642 DINKEQKRLVVTLKQSSELSNAQKNEINKLVSGKSIVKTVIVEKTKDSVLVELEGSHLRG 701 Query: 130 FLPGSLVDVRPVRDTLHL-----EGKELEFKVIKLD-QKRNNVVVSRRAVIESENSAERD 183 + + L G+ LE ++ D + R + +++++IE+ S Sbjct: 702 VIYDGQLSDGNYEQNRALAKRLTIGESLEVLILDKDLKARTVIATAKKSLIEALKSKSFP 761 Query: 184 QLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 ++ VKG VK++T G FV G + GL+ + + S+ I Sbjct: 762 VDFNDVTVNAVVKGYVKSVTSLGLFVTFTGRLTGLILAKYVTKNAKEDLSKKFYKYQSIN 821 Query: 243 VKVLKFDRERTRVSLGLKQLGE-------------DPWVAIAKRYPEGTKLTGRVTNLTD 289 +VL D+E R L L D I Y G + + Sbjct: 822 CRVLSVDKENERFLLALNNSSSSFTKDDEQLIKPIDTTKKIVADYQPGETTKAVIRAVKG 881 Query: 290 YGCFVEIEEGVEGLVHVSEMDWTNKNIH-----PSKVVNVGDVVEVMVLDIDEERRR--- 341 V++ + ++G V +++ + K+I + G+ V+V V+ + + + Sbjct: 882 TQLNVQLADNLQGRVDITQCFNSIKDIKNLHQPLASRFQKGETVDVKVIGVHDAKNHTFL 941 Query: 342 --------------ISLGLKQCKANP-WQQFAETHNKGDRVEGKIKSITDFGIFIGLDGG 386 +SL Q P + +GD + + +I + +++ + Sbjct: 942 PITHRKSNRTTILELSLTNPQINNKPLTDLKLKDFKQGDELLAFVNNIINGMVWVSISPS 1001 Query: 387 IDGLVHLSDISWNVAG-EEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWV 445 I G + + D++ + + ++ + G+ I V QVD + + + L ++ F Sbjct: 1002 IKGRISMLDLTEDGSIFQDIDNKLPIGNAINVKVKQVDLQHQILVLTAREN----FIEKF 1057 Query: 446 ALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKF 505 K+ I ++ + VEL + V ++A D E V +V D V AK Sbjct: 1058 EDVKQDEIYPARIIKIKPNHVLVELGNNVIASSFLTDALDDYSEKLDHVFNVNDYVSAKV 1117 Query: 506 TGVDRKNRAISLSVRAKDEADEK 528 +D N+ IS+S+R +K Sbjct: 1118 LDIDSINKRISVSLRTNKPTSDK 1140 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 94/572 (16%), Positives = 212/572 (37%), Gaps = 57/572 (9%) Query: 22 SIVRGVVVAIDKDVVLVDA-GLKSESAIPAEQFKNAQGE------LEIQVGDEVDVALDA 74 SIV+ V+V KD VLV+ G I Q + E + +G+ ++V + Sbjct: 676 SIVKTVIVEKTKDSVLVELEGSHLRGVIYDGQLSDGNYEQNRALAKRLTIGESLEVLILD 735 Query: 75 VEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG----GFTVELNG-IRA 129 + + + +K+ + TV V+ G VK G V G + Sbjct: 736 KDLKARTVIATAKKSLIEALKSKSFPVDFNDVTVNAVVKGYVKSVTSLGLFVTFTGRLTG 795 Query: 130 FLPGSLVDVRPVRDTLH--LEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER----- 182 + V D + + + +V+ +D++ +++ S + Sbjct: 796 LILAKYVTKNAKEDLSKKFYKYQSINCRVLSVDKENERFLLALNNSSSSFTKDDEQLIKP 855 Query: 183 ----DQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDM--AWKRVKHPSE-- 233 +++ + Q G K +++ + V L + G + IT + K +K+ + Sbjct: 856 IDTTKKIVADYQPGETTKAVIRAVKGTQLNVQLADNLQGRVDITQCFNSIKDIKNLHQPL 915 Query: 234 --IVNVGDEITVKVLKFDRERT-----------------RVSLGLKQLGEDPWVAIA-KR 273 G+ + VKV+ + +SL Q+ P + K Sbjct: 916 ASRFQKGETVDVKVIGVHDAKNHTFLPITHRKSNRTTILELSLTNPQINNKPLTDLKLKD 975 Query: 274 YPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMD-WTNKNIHPSKVVNVGDVVEVMV 332 + +G +L V N+ + +V I ++G + + ++ + + +G+ + V V Sbjct: 976 FKQGDELLAFVNNIINGMVWVSISPSIKGRISMLDLTEDGSIFQDIDNKLPIGNAINVKV 1035 Query: 333 LDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVH 392 +D + + + L ++ + + E + + +I I + + L + Sbjct: 1036 KQVDLQHQILVLTAREN----FIEKFEDVKQDEIYPARIIKIKPNHVLVELGNNVIASSF 1091 Query: 393 LSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVK--QLAEDPFNNWVALNKK 450 L+D + + E+ + D ++A VL +D+ +RIS+ ++ + D N V + Sbjct: 1092 LTD-ALDDYSEKLDHVFNVNDYVSAKVLDIDSINKRISVSLRTNKPTSDKVINSVGDLTR 1150 Query: 451 GAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDR 510 G ++ G V + G V L + +R S+ S ++D V K + Sbjct: 1151 GQVIKGFVKNISNNGVYVSLGRSIYALVRVSDLSDSYLKDWQNFFKPNQPVIGKIVNC-K 1209 Query: 511 KNRAISLSVRAKDEADEKDAIATVNKQEDANF 542 + I ++++ + + + T + + + Sbjct: 1210 QEGRILMTLKESEVNGDLKIMKTFDDLQIGDI 1241 Score = 137 bits (346), Expect = 8e-31, Method: Composition-based stats. Identities = 84/536 (15%), Positives = 202/536 (37%), Gaps = 32/536 (5%) Query: 7 QLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGL-KSESAIPAEQFKNAQGEL-EIQV 64 + ESL+ + +I++ V +I+ +++D G + I ++ NA+ ++ I Sbjct: 213 ESVNESLEVDDLIVNNILQCSVKSIEDHGIILDTGKPEYSGFISNKELTNAKIDVTTIVP 272 Query: 65 GDEVDVAL----DAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 G + ++ + + + K + I+ + + V +IN + G Sbjct: 273 GLVILCSIATKPSSRTINLKPIVATISAKKSTVSTISSIDSIQPGVIVDALINDVTENGL 332 Query: 121 TVELNG-IRAFLPGSLVDVRPVRDTLHL--EGKELEFKVIKL---DQKRNNVVVSRRAVI 174 ++ G + + S + +++ H G ++ +V+ + + + ++ V+ Sbjct: 333 VTKVYGLVDGTIALSQIQNFDLKELKHKYAIGSTVKARVLAVLLKNGTKKLILSILPHVL 392 Query: 175 ESENSAERDQLLENLQEGMEV-KGIVKNLTDYGAFVDLGGVD--GLLHITDMAWKRVKHP 231 + + + + Q LE G + V + +V G G +H + + Sbjct: 393 QLGDDSSQTQALEAFPIGHVFDEVKVIGNDKHYVYVSFGSSSLFGQIHQSKFDDNKTLL- 451 Query: 232 SEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGT-KLTGRVTNLTD- 289 ++G +V+ F+ + L + D + P G + + + Sbjct: 452 --DYSIGSTHKSRVIGFNEVDNLLILSFESKVIDAEYLNVRDVPIGKLLPNVEILKVLED 509 Query: 290 -YGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISL--GL 346 G V+ + +G V ++M K ++P + VG + +L+ + +R I+ L Sbjct: 510 GVGINVKFFDEFKGFVPGNQMSDI-KLVYPERKFRVGTKTKGRLLNYNGKRALITFRKAL 568 Query: 347 KQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAV 406 + + + G + ++ G + G + + ++IS E+A Sbjct: 569 VNLEDDEILSNIDQAEIGFKTNAIVEKFVPNGCIVSFFGNLRAFLPKTEISETFV-EDAS 627 Query: 407 REYKKGDEIAAVVLQVDAERERISLGVKQLAE--DPFNNWVALNKKG-AIVTGKVTAVDA 463 K G + +L ++ E++R+ + +KQ +E + N + G +IV + Sbjct: 628 SYLKVGQIVKVRILDINKEQKRLVVTLKQSSELSNAQKNEINKLVSGKSIVKTVIVEKTK 687 Query: 464 KGATVELAD-GVEGYLRASEASR---DRVEDATLVLSVGDEVEAKFTGVDRKNRAI 515 VEL + G + + S ++ L++G+ +E D K R + Sbjct: 688 DSVLVELEGSHLRGVIYDGQLSDGNYEQNRALAKRLTIGESLEVLILDKDLKARTV 743 Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats. Identities = 73/535 (13%), Positives = 188/535 (35%), Gaps = 32/535 (5%) Query: 43 KSESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAY 102 KS + + + ++G + + + F +++ + ++ ++ Sbjct: 164 KSATFKSKTEKEFPDLLKIFKLGSWLKAKITTSNEDFKN----KKRIELTIEPESVNESL 219 Query: 103 ED-----AETVTGVINGKVKGGFTVELNG--IRAFLPGSLVDVRPVRDTLHLEGKELEFK 155 E + + G ++ F+ + + T + G + Sbjct: 220 EVDDLIVNNILQCSVKSIEDHGIILDTGKPEYSGFISNKELTNAKIDVTTIVPGLVILCS 279 Query: 156 V-IKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG- 213 + K + N+ + +++ ++++Q G+ V ++ ++T+ G + G Sbjct: 280 IATKPSSRTINLKPIVATISAKKSTVSTISSIDSIQPGVIVDALINDVTENGLVTKVYGL 339 Query: 214 VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERT--RVSLGLK----QLGEDPW 267 VDG + ++ + +K +G + +VL + ++ L + QLG+D Sbjct: 340 VDGTIALSQIQNFDLKELKHKYAIGSTVKARVLAVLLKNGTKKLILSILPHVLQLGDDSS 399 Query: 268 VAIA-KRYPEGTKL-TGRVTNLTDYGCFVEIEEG-VEGLVHVSEMDWTNKNIHPSKVVNV 324 A + +P G +V + +V + G +H S+ D + ++ Sbjct: 400 QTQALEAFPIGHVFDEVKVIGNDKHYVYVSFGSSSLFGQIHQSKFDDNKTLLD----YSI 455 Query: 325 GDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVE-GKIKSITDFGIF--I 381 G + V+ +E + L + + G + +I + + G+ + Sbjct: 456 GSTHKSRVIGFNEVDNLLILSFESKVIDAEYLNVRDVPIGKLLPNVEILKVLEDGVGINV 515 Query: 382 GLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLG--VKQLAED 439 G V + +S ++ R+++ G + +L + +R I+ + L +D Sbjct: 516 KFFDEFKGFVPGNQMS-DIKLVYPERKFRVGTKTKGRLLNYNGKRALITFRKALVNLEDD 574 Query: 440 PFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGD 499 + + + G V G V + +L +E S VEDA+ L VG Sbjct: 575 EILSNIDQAEIGFKTNAIVEKFVPNGCIVSFFGNLRAFLPKTEISETFVEDASSYLKVGQ 634 Query: 500 EVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAA 554 V+ + ++++ + + ++++ E + + E K + Sbjct: 635 IVKVRILDINKEQKRLVVTLKQSSELSNAQKNEINKLVSGKSIVKTVIVEKTKDS 689 >UniRef50_B8PP03 Predicted protein (Fragment) n=1 Tax=Postia placenta Mad-698-R RepID=B8PP03_POSPM Length = 1088 Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats. Identities = 114/603 (18%), Positives = 214/603 (35%), Gaps = 96/603 (15%) Query: 9 FEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEV 68 E PG++V+ +V A+ D + + I + E +VG ++ Sbjct: 174 LSEVASVTSILPGTLVQSLVTAVVPDGLNLQVLGYFVGTIDQFHLRAGDVEENYKVGQKI 233 Query: 69 DVALD-----------AVEDGFGETLLSREKAKRHEAWIT--LEKAYEDAETVTGV--IN 113 + A+ LS + A + L+ AY + V + Sbjct: 234 KARILYDVSPSTPPRFALSVVEHVLKLSPKHAAGSDGSKDSSLQDAYPVGAILEAVKVVR 293 Query: 114 GKVKGGFTVELN-GIRAFLPGSLVDVRPVRDTLH-----LEGKELEFKVIKLDQKRNNVV 167 + + G VE++ G+ F+ S V V G + +V + Sbjct: 294 VEAERGLVVEISSGLEGFVHISQVSDEHVPSLSPSSGHWKVGTVHKARVTGHFHLDGCLQ 353 Query: 168 VSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWK 226 +S R + + + + +Q G +KG VK LT+ FV + G VDG++ A Sbjct: 354 LSFRPSVLEQKFLQ----VGEVQVGELIKGTVKRLTESALFVSMSGSVDGVVWPNHYADI 409 Query: 227 RVKHPSEIVNVG--------------DEITVK---------------------------- 244 +KHP G V+ Sbjct: 410 ALKHPQRRFRPGVVAELQKDKAVITLQPTQVRALLSLNNLANRRGVSLTQLRTSLKTDEK 469 Query: 245 -----VLKFDRERTRVSLGLKQLGEDPWVAIA----KRYPEGTKLTGRVTNLTDYGCFVE 295 V+ + E+ V + K ++ + G + GRV G V+ Sbjct: 470 LQDLVVVSRNPEKGFVLVATKPKEKESLLQKGSLNLDTIQVGQVVGGRVLRHGRQGALVK 529 Query: 296 IEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQ 355 + + G +H + D + V +++ +VL ID ++R+++L + + P Q Sbjct: 530 LTSSISGTLHPT--DTCDDFDSGRAFPPVDSILKAVVLSIDRDKRQLTLSTRPSRLYPDQ 587 Query: 356 QF---------AETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAV 406 G V G IK++ + GIF+ L ID V + ++ ++ Sbjct: 588 AKDVKDHEVDGVSDLKVGQTVRGFIKNVAEHGIFVMLGRHIDARVQIKELFDEYV-KDWK 646 Query: 407 REYKKGDEIAAVVLQVDAERERISLGVK--QLAEDPFNN-WVALNKKGAIVTGKVTAVDA 463 + + VL VD +++++ + + L D + +A +G V G+V ++ Sbjct: 647 SHFAANQLVKGRVLSVDFDKKQVEMTFRSGDLKRDARSQSTLADLSEGQKVDGRVKKIED 706 Query: 464 KGATVELAD-GVEGYLRASEASRDRVEDATLV---LSVGDEVEAKFTGVDRKNRAISLSV 519 G +E+A + G SE S ++ D TL D+V+A +DR+ R IS + Sbjct: 707 YGLFIEIAGSKLSGLCHKSELSDNKDADVTLALRSFRENDQVKAVILSIDREKRRISFGL 766 Query: 520 RAK 522 + Sbjct: 767 KPS 769 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 86/447 (19%), Positives = 177/447 (39%), Gaps = 60/447 (13%) Query: 8 LFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQGELEIQV 64 L ++ L+ E + G +++G V + + + V + + + + + + Sbjct: 361 LEQKFLQVGEVQVGELIKGTVKRLTESALFVSMSGSVDGVVWPNHYADIALKHPQRRFRP 420 Query: 65 GDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL 124 G + ++ L + + + L + G Sbjct: 421 G-----VVAELQKDKAVITLQPTQVRALLSLNNL----------------ANRRGV---- 455 Query: 125 NGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQ 184 SL +R T K + V+ + ++ V+V+ + + + Sbjct: 456 ---------SLTQLRTSLKTDE---KLQDLVVVSRNPEKGFVLVATKPKEKESLLQKGSL 503 Query: 185 LLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITV 243 L+ +Q G V G V GA V L + G LH TD V + Sbjct: 504 NLDTIQVGQVVGGRVLRHGRQGALVKLTSSISGTLHPTDTCDDF-DSGRAFPPVDSILKA 562 Query: 244 KVLKFDRERTRVSLGLK--QLGEDPWVAIAKRY-------PEGTKLTGRVTNLTDYGCFV 294 VL DR++ +++L + +L D + G + G + N+ ++G FV Sbjct: 563 VVLSIDRDKRQLTLSTRPSRLYPDQAKDVKDHEVDGVSDLKVGQTVRGFIKNVAEHGIFV 622 Query: 295 EIEEGVEGLVHVSEM-DWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQ---CK 350 + ++ V + E+ D K+ +V+ VL +D +++++ + + + Sbjct: 623 MLGRHIDARVQIKELFDEYVKDWKSH--FAANQLVKGRVLSVDFDKKQVEMTFRSGDLKR 680 Query: 351 ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDG-GIDGLVHLSDISWNVAGE--EAVR 407 Q ++G +V+G++K I D+G+FI + G + GL H S++S N + A+R Sbjct: 681 DARSQSTLADLSEGQKVDGRVKKIEDYGLFIEIAGSKLSGLCHKSELSDNKDADVTLALR 740 Query: 408 EYKKGDEIAAVVLQVDAERERISLGVK 434 +++ D++ AV+L +D E+ RIS G+K Sbjct: 741 SFRENDQVKAVILSIDREKRRISFGLK 767 Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 101/623 (16%), Positives = 219/623 (35%), Gaps = 100/623 (16%) Query: 10 EESLKEIETRPGSIVRGVVVAIDKDVVLVDAGL-KSESAIPAEQFKNAQ--GELEIQVGD 66 S+ + + R G + V +I+ ++D G+ + ++ K + ++ VG Sbjct: 85 NASVSKSDLRAGFTLSAAVKSIEDHGYILDLGIPDVSGFLSFKEAKKGPFGDDNKLPVGR 144 Query: 67 EVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYED---AETVTGVINGKVKGGFTVE 123 +DV + + +S + A +A ++ + V ++ V G ++ Sbjct: 145 LIDVCVVKITGNGRTCTVSVDSASVRDASLSEVASVTSILPGTLVQSLVTAVVPDGLNLQ 204 Query: 124 LNGIRAFL-PGSLVDVRPVR-DTLHLEGKELEFKVIK----LDQKRNNVVVSRRAVIESE 177 + G F+ +R + + G++++ +++ R + V + S Sbjct: 205 VLGY--FVGTIDQFHLRAGDVEENYKVGQKIKARILYDVSPSTPPRFALSVVEHVLKLSP 262 Query: 178 NSA------ERDQLLENLQEGMEVKG--IVKNLTDYGAFVDL-GGVDGLLHITDMAWKRV 228 A + L + G ++ +V+ + G V++ G++G +HI+ ++ + V Sbjct: 263 KHAAGSDGSKDSSLQDAYPVGAILEAVKVVRVEAERGLVVEISSGLEGFVHISQVSDEHV 322 Query: 229 KHPSE---IVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVT 285 S VG +V + L + + G + G V Sbjct: 323 PSLSPSSGHWKVGTVHKARVTGHFHLDGCLQLSFRPSVLEQKFLQVGEVQVGELIKGTVK 382 Query: 286 NLTDYGCFVEIEEGVEGLV---HVSEMDWTNKNIHPSKVVNVGDVVEVM----VLDIDEE 338 LT+ FV + V+G+V H +++ HP + G V E+ V+ + Sbjct: 383 RLTESALFVSMSGSVDGVVWPNHYADIAL----KHPQRRFRPGVVAELQKDKAVITLQPT 438 Query: 339 RRRISLGL-----------------------------------------------KQCKA 351 + R L L K+ Sbjct: 439 QVRALLSLNNLANRRGVSLTQLRTSLKTDEKLQDLVVVSRNPEKGFVLVATKPKEKESLL 498 Query: 352 NPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKK 411 +T G V G++ G + L I G +H +D + ++ R + Sbjct: 499 QKGSLNLDTIQVGQVVGGRVLRHGRQGALVKLTSSISGTLHPTDTCDDF---DSGRAFPP 555 Query: 412 GDEI-AAVVLQVDAERERISLGVKQLAEDPFN---------NWVALNKKGAIVTGKVTAV 461 D I AVVL +D ++ +++L + P + V+ K G V G + V Sbjct: 556 VDSILKAVVLSIDRDKRQLTLSTRPSRLYPDQAKDVKDHEVDGVSDLKVGQTVRGFIKNV 615 Query: 462 DAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRA 521 G V L ++ ++ E + V+D + V+ + VD + + ++ R+ Sbjct: 616 AEHGIFVMLGRHIDARVQIKELFDEYVKDWKSHFAANQLVKGRVLSVDFDKKQVEMTFRS 675 Query: 522 ---KDEADEKDAIATVNKQEDAN 541 K +A + +A +++ + + Sbjct: 676 GDLKRDARSQSTLADLSEGQKVD 698 Score = 135 bits (339), Expect = 6e-30, Method: Composition-based stats. Identities = 100/550 (18%), Positives = 188/550 (34%), Gaps = 94/550 (17%) Query: 62 IQVGDEVDVALDAVEDGFGE--TLLSREKAKRHEAWITLEKAY--------------EDA 105 G V + AV ++L R + + +A +E + Sbjct: 37 FPAGQYVRAVVSAVHPPGATDASVLGRARDEVQKASRRIELSLIPEKVNASVSKSDLRAG 96 Query: 106 ETVTGVINGKVKGGFTVELN--GIRAFLPGSLVDVRPVRDTLHL-EGKELEFKVIKLDQK 162 T++ + G+ ++L + FL P D L G+ ++ V+K+ Sbjct: 97 FTLSAAVKSIEDHGYILDLGIPDVSGFLSFKEAKKGPFGDDNKLPVGRLIDVCVVKITGN 156 Query: 163 RNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITD 222 VS + + S + ++ G V+ +V + G + + G + D Sbjct: 157 GRTCTVSVDSASVRDASLSEVASVTSILPGTLVQSLVTAVVPDGLNLQVLGY--FVGTID 214 Query: 223 MAWKRVKHPSEIVNVGDEITVKVLKFDRERT---RVSLGLKQ--LGEDPW---------- 267 R E VG +I ++L +D + R +L + + L P Sbjct: 215 QFHLRAGDVEENYKVGQKIKARIL-YDVSPSTPPRFALSVVEHVLKLSPKHAAGSDGSKD 273 Query: 268 VAIAKRYPEGTKLTG-RVTNL-TDYGCFVEIEEGVEGLVHVSEMDWTN-KNIHPSK-VVN 323 ++ YP G L +V + + G VEI G+EG VH+S++ + ++ PS Sbjct: 274 SSLQDAYPVGAILEAVKVVRVEAERGLVVEISSGLEGFVHISQVSDEHVPSLSPSSGHWK 333 Query: 324 VGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGL 383 VG V + V + L + G+ ++G +K +T+ +F+ + Sbjct: 334 VGTVHKARVTGHFHLDGCLQLSFRPSVLEQKFLQVGEVQVGELIKGTVKRLTESALFVSM 393 Query: 384 DGGIDGLV---HLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAE-- 438 G +DG+V H +DI+ + V+ + + R L + LA Sbjct: 394 SGSVDGVVWPNHYADIALKHPQRRFRPGVVAELQKDKAVITLQPTQVRALLSLNNLANRR 453 Query: 439 -------------------------DPFNNWV--------------------ALNKKGAI 453 +P +V + G + Sbjct: 454 GVSLTQLRTSLKTDEKLQDLVVVSRNPEKGFVLVATKPKEKESLLQKGSLNLDTIQVGQV 513 Query: 454 VTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEV-EAKFTGVDRKN 512 V G+V +GA V+L + G L ++ D D+ D + +A +DR Sbjct: 514 VGGRVLRHGRQGALVKLTSSISGTLHPTDTCDDF--DSGRAFPPVDSILKAVVLSIDRDK 571 Query: 513 RAISLSVRAK 522 R ++LS R Sbjct: 572 RQLTLSTRPS 581 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 57/274 (20%), Positives = 110/274 (40%), Gaps = 20/274 (7%) Query: 6 AQLFEE-SLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA--QGELEI 62 L ++ SL + G +V G V+ + LV + + G Sbjct: 495 ESLLQKGSLNLDTIQVGQVVGGRVLRHGRQGALVKLTSSISGTLHPTDTCDDFDSGRAFP 554 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYED--------AETVTGVING 114 V + + +++ + LS ++ + K +E +TV G I Sbjct: 555 PVDSILKAVVLSIDRDKRQLTLSTRPSRLYPDQAKDVKDHEVDGVSDLKVGQTVRGFIKN 614 Query: 115 KVKGGFTVELN-GIRAFLPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRR 171 + G V L I A + + V+D + ++ +V+ +D + V ++ R Sbjct: 615 VAEHGIFVMLGRHIDARVQIKELFDEYVKDWKSHFAANQLVKGRVLSVDFDKKQVEMTFR 674 Query: 172 AVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG--VDGLLHITDMAWKRVK 229 + + + A L +L EG +V G VK + DYG F+++ G + GL H ++++ + Sbjct: 675 S-GDLKRDARSQSTLADLSEGQKVDGRVKKIEDYGLFIEIAGSKLSGLCHKSELSDNKDA 733 Query: 230 HPS---EIVNVGDEITVKVLKFDRERTRVSLGLK 260 + D++ +L DRE+ R+S GLK Sbjct: 734 DVTLALRSFRENDQVKAVILSIDREKRRISFGLK 767 >UniRef50_A8PVH2 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS 7966 RepID=A8PVH2_MALGO Length = 1217 Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats. Identities = 91/556 (16%), Positives = 201/556 (36%), Gaps = 48/556 (8%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA---Q 57 M+ + L +E ++ E G +VR + + + V + + F + Sbjct: 519 MSMRASVLSKEFMRVSEVPIGQVVRVSIRKVTPKAIFVRMNGNVDGVVFPMHFSDVRLTH 578 Query: 58 GELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYED--AETVTGVINGK 115 E + + E+ + + +L+ +++ L K + V+ + Sbjct: 579 PEKKYKPNLELKARIIHTDPMRNRIVLTLKRSLITSDLPLLAKLEDVRVGVVTNAVVLKQ 638 Query: 116 VKGGFTVELNG-IRAFLPGSLVD----VRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSR 170 + VEL G +RA +P + L+ GK ++ ++ K + + ++ S Sbjct: 639 LPASMLVELGGTLRAVVPFAEASDTAMTSEQLGELNPTGKVVKVRITKFEPETGRIMASM 698 Query: 171 RAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG--GVDGLLHITDMAWKRV 228 + ++ + G V D A + L G LL + D++ +R Sbjct: 699 KQASSVYLQRLN---VDAVDVGERVAARFAGWQDDVAILVLEPSGTRALLSLHDLSRQRR 755 Query: 229 KHPSEI---VNVGDEI-TVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRV 284 ++ + + + + V K + + V L E P +K G + RV Sbjct: 756 VDADKVRASLAANELLSDLYVAKKNAVKGYVVLS----YESP--DASKTVEVGGRYEARV 809 Query: 285 TNLTD---YGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRR 341 Y + +H +E + N V GD +VL + ++RR Sbjct: 810 VETHHDKLYSLVSLLGTPCRARLHATECSDSLANATLPDV---GDQCTCIVLSVRKKRRE 866 Query: 342 ISLGLKQCK-----------ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGL 390 + ++ + +P G + G +K++T+ G+++ L D Sbjct: 867 ADVSIRPSRLAPSDDVNASVDDPVVDSTAQLEIGMHIRGLVKAVTNHGVYVSLGPHTDAR 926 Query: 391 VHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAED---PFNNWVAL 447 V + ++ ++ +++ G + +LQ++ +I L +K+ + P + Sbjct: 927 VMIKELFDEYV-KDFRTKFQVGQCVRGTILQIEP-NGQIELSLKKSRLEGVKPSAGAWSK 984 Query: 448 NKKGAIVTGKVTAVDAKGATVELAD-GVEGYLRASEASRDRVEDATLVLSVGDEVEAKFT 506 +G V V + G +++ V G SE S ++ +A +VGD V+A Sbjct: 985 IHEGEKVKAHVRGITEYGIFLQVDGTDVSGLCHKSELSDNKSANAIRAFAVGDRVKAVVL 1044 Query: 507 GVDRKNRAISLSVRAK 522 +D R ++ ++ Sbjct: 1045 KMDADKRRVAFGLKPS 1060 Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats. Identities = 91/549 (16%), Positives = 195/549 (35%), Gaps = 45/549 (8%) Query: 21 GSIVRGVVVAIDKDVVLV--DAGLKSESAIPAEQFKNAQGEL------EIQVGDEVDVAL 72 G +R V A+ ++ LV G + + + + +VG E + + Sbjct: 448 GMQLRVRVQAVFREWGLVCEVPGQDIPAFVHISSVSDEHIDTLSATSGPWRVGTEHEARV 507 Query: 73 DAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNG-IRAFL 131 ++S + + ++ + + + V I V +NG + + Sbjct: 508 TGHALTDCLLMMSMRASVLSKEFMRVSE-VPIGQVVRVSIRKVTPKAIFVRMNGNVDGVV 566 Query: 132 -PGSLVDVRPVRDTLHLE-GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENL 189 P DVR + EL+ ++I D RN +V++ + + + + LE++ Sbjct: 567 FPMHFSDVRLTHPEKKYKPNLELKARIIHTDPMRNRIVLTLKRSLIT-SDLPLLAKLEDV 625 Query: 190 QEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKH--PSEIVNVGDEITVKVL 246 + G+ +V V+LGG + ++ + + + E+ G + V++ Sbjct: 626 RVGVVTNAVVLKQLPASMLVELGGTLRAVVPFAEASDTAMTSEQLGELNPTGKVVKVRIT 685 Query: 247 KFDRERTRVSLGLKQLGEDPWVAI-AKRYPEGTKLTGRVTNLTDYGCFVEIEE-GVEGLV 304 KF+ E R+ +KQ + G ++ R D + +E G L+ Sbjct: 686 KFEPETGRIMASMKQASSVYLQRLNVDAVDVGERVAARFAGWQDDVAILVLEPSGTRALL 745 Query: 305 HVSEMDWTNKNI--HPSKVVNVGDVV-EVMVLDIDEERRRISLGLKQCKANPWQQFAETH 361 + ++ + + +++ ++ V + + + L + A ++T Sbjct: 746 SLHDLSRQRRVDADKVRASLAANELLSDLYVAKKNAVKGYVVLSYESPDA------SKTV 799 Query: 362 NKGDRVEGKIKSITDFGI--FIGLDGG-IDGLVHLSDISWNVAGEEAVREYKKGDEIAAV 418 G R E ++ + + L G +H ++ S ++A GD+ + Sbjct: 800 EVGGRYEARVVETHHDKLYSLVSLLGTPCRARLHATECSDSLANATLPD---VGDQCTCI 856 Query: 419 VLQVDAERERISLGVK-----------QLAEDPFNNWVALNKKGAIVTGKVTAVDAKGAT 467 VL V +R + ++ +DP + A + G + G V AV G Sbjct: 857 VLSVRKKRREADVSIRPSRLAPSDDVNASVDDPVVDSTAQLEIGMHIRGLVKAVTNHGVY 916 Query: 468 VELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADE 527 V L + + E + V+D VG V ++ N I LS++ Sbjct: 917 VSLGPHTDARVMIKELFDEYVKDFRTKFQVGQCVRGTILQIEP-NGQIELSLKKSRLEGV 975 Query: 528 KDAIATVNK 536 K + +K Sbjct: 976 KPSAGAWSK 984 Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats. Identities = 92/525 (17%), Positives = 180/525 (34%), Gaps = 56/525 (10%) Query: 10 EESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSE--SAIPAEQFKNAQGELEIQVGDE 67 E ++ + PG ++ V + + +D G+ + +P + + ++V Sbjct: 253 NEGIRASDLSPGYVLSAAVQSPEDYGYTLDLGINDDVHGFLPTKDRLRVGSVVLVEV--- 309 Query: 68 VDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNG- 126 +V+ L+ + A V +I V G +V+L G Sbjct: 310 -----SSVDGRAVRCQLATSGEPAPVTTAPSQSAMLPGVPVRALITSHVPQGLSVKLFGM 364 Query: 127 ----IRAF-LPGSLVDVRPVRDTLHLEGKELEFKVI--------KLDQKRNNVVVSRR-- 171 + +F +P L D GK++ +V+ + + + V +RR Sbjct: 365 WDGTVDSFHVPRGLAH----DDAALAPGKKIMARVLWNMPADYEQAQEASIDAVGARRIG 420 Query: 172 -------AVIESENSAERDQLLENLQEGMEVKGIVKNL-TDYGAFVDLGGVD--GLLHIT 221 +E+ ++A L GM+++ V+ + ++G ++ G D +HI+ Sbjct: 421 LSCVSHVVSLETPSAAGSVPLTHAFPIGMQLRVRVQAVFREWGLVCEVPGQDIPAFVHIS 480 Query: 222 DMAWKRVKHPSEI---VNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGT 278 ++ + + S VG E +V + + ++ P G Sbjct: 481 SVSDEHIDTLSATSGPWRVGTEHEARVTGHALTDCLLMMSMRASVLSKEFMRVSEVPIGQ 540 Query: 279 KLTGRVTNLTDYGCFVEIEEGVEGLV---HVSEMDWTNKNIHPSKVVNVGDVVEVMVLDI 335 + + +T FV + V+G+V H S++ + HP K ++ ++ Sbjct: 541 VVRVSIRKVTPKAIFVRMNGNVDGVVFPMHFSDV----RLTHPEKKYKPNLELKARIIHT 596 Query: 336 DEERRRISLGLKQC---KANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVH 392 D R RI L LK+ P E G + + + L G + +V Sbjct: 597 DPMRNRIVLTLKRSLITSDLPLLAKLEDVRVGVVTNAVVLKQLPASMLVELGGTLRAVVP 656 Query: 393 LSDISWNVAGEEAVREYKK-GDEIAAVVLQVDAERERISLGVKQLAEDPFNNW-VALNKK 450 ++ S E + E G + + + + E RI +KQ + V Sbjct: 657 FAEASDTAMTSEQLGELNPTGKVVKVRITKFEPETGRIMASMKQASSVYLQRLNVDAVDV 716 Query: 451 GAIVTGKVTAVDAKGATVELAD-GVEGYLRASEASRDRVEDATLV 494 G V + A + L G L + SR R DA V Sbjct: 717 GERVAARFAGWQDDVAILVLEPSGTRALLSLHDLSRQRRVDADKV 761 Score = 98.1 bits (243), Expect = 7e-19, Method: Composition-based stats. Identities = 69/421 (16%), Positives = 124/421 (29%), Gaps = 63/421 (14%) Query: 148 EGKELEFKVIKL-DQKRNNVVVSRRAVIESENSAERDQLL------------ENLQEGME 194 G+ + V + R E E ++R QL +L G Sbjct: 207 VGQWVRASVESVTAAGSKRQWGMGREGGEYERESQRVQLTMEPTIVNEGIRASDLSPGYV 266 Query: 195 VKGIVKNLTDYGAFVDLG---GVDGLLHITD-MAWKRVKHPSEIVNVGDEITVKVLKFDR 250 + V++ DYG +DLG V G L D + V G + ++ Sbjct: 267 LSAAVQSPEDYGYTLDLGINDDVHGFLPTKDRLRVGSVVLVEVSSVDGRAVRCQL----- 321 Query: 251 ERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNL----TDYGCFVEIEEGVEGLVHV 306 +P V L G V++ +G V Sbjct: 322 ----------ATSGEPAPVTTAPSQSAMLPGVPVRALITSHVPQGLSVKLFGMWDGTVDS 371 Query: 307 SEMDWTNKNIHPSKVVNVGDVVEVMVL-------------DIDE-ERRRISLG------- 345 + H + G + VL ID RRI L Sbjct: 372 FHVP--RGLAHDDAALAPGKKIMARVLWNMPADYEQAQEASIDAVGARRIGLSCVSHVVS 429 Query: 346 LKQCKANPWQQFAETHNKGDRVEGKIKSI-TDFGIFIGLDG-GIDGLVHLSDISWNVAGE 403 L+ A G ++ +++++ ++G+ + G I VH+S +S Sbjct: 430 LETPSAAGSVPLTHAFPIGMQLRVRVQAVFREWGLVCEVPGQDIPAFVHISSVSDEHIDT 489 Query: 404 EAVRE--YKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAV 461 + ++ G E A V + + ++ V+ G +V + V Sbjct: 490 LSATSGPWRVGTEHEARVTGHALTDCLLMMSMRASVLSKEFMRVSEVPIGQVVRVSIRKV 549 Query: 462 DAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRA 521 K V + V+G + S R+ E++A+ D I L+++ Sbjct: 550 TPKAIFVRMNGNVDGVVFPMHFSDVRLTHPEKKYKPNLELKARIIHTDPMRNRIVLTLKR 609 Query: 522 K 522 Sbjct: 610 S 610 >UniRef50_C1ECK5 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1ECK5_9CHLO Length = 2018 Score = 178 bits (453), Expect = 3e-43, Method: Composition-based stats. Identities = 109/593 (18%), Positives = 182/593 (30%), Gaps = 101/593 (17%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN------------AQG 58 E LK R G V GVV ++ + V + + + + G Sbjct: 74 ELLKYKNLRVGMKVLGVVTEVNDRGLTVSLPNGLKGTVTRAEASDVLAPASKRGKKGPDG 133 Query: 59 ELE--------------------------IQVGDEVDVALDAVEDGF---GETLLSREKA 89 + QVG + + + G LS + Sbjct: 134 DDPSEASESESESEEEDEDEDERLDLTSMFQVGQILRCKVRQLGKGKSGGKRIDLSTRLS 193 Query: 90 KRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN---GIRAFLPG-----SLVDVRPV 141 + + D V +N G+ + FLP SLVD Sbjct: 194 QVCSNISG--HSLTDGMAVPACVNSVEDHGYVLSFGCSDSPTGFLPRKSCPQSLVDT--- 248 Query: 142 RDTLHLEGKELEFKVIKLDQKRNN------------VVVSRRAVIESENSAERDQLLENL 189 + G L+ + + K + V ++ + L Sbjct: 249 ----LVRGSILDVVIAGDEGKDGKRARSKGPGGVMQCTADPKRVAQAVTHEGDGAAMSTL 304 Query: 190 QEGMEVKGIVKNL----------TDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGD 239 GM V VK + T + A VD V G +H P+ G+ Sbjct: 305 LPGMLVNARVKAVLADGLQMNFMTYFTATVDAFHVGGGVH------GAAPDPAAAHKTGE 358 Query: 240 EITVKVLKFDRERTRVSLGLKQ--LGEDPWVAIAKRYPEGTKLTGRVTNLTD--YGCFVE 295 + +VL D RV L L+ + + V GT V D G +E Sbjct: 359 RVRARVLYVDAAAKRVGLTLRPHLVTLEASVRAGAMPKPGTIFETAVVRRVDTAIGVLLE 418 Query: 296 IEEGVE------GLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC 349 ++ E G H+S+ + + K VG V V+ ++ K Sbjct: 419 LKSENENVHPTFGYCHISDAADEHLD-KLEKRFKVGKKVRARVIGSRAMDSVATVSCKST 477 Query: 350 KANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREY 409 + E G +V G++ ++ +G + L G+ L + IS ++ G + Sbjct: 478 VLDQPFLSLEELVPGMQVRGEVVAVEPYGAVVKLAPGVKALCPPNHIS-DIPGRVTNAKV 536 Query: 410 KKGDEIAAVVLQVDAERERISLGVKQL---AEDPFNNWVALNKKGAIVTGKVTAVDAKGA 466 K+G V+ VD + R + K+ +E P + G G VT V+ G Sbjct: 537 KEGLSAKFRVVSVDRVKGRAVVTHKKQLIRSELPVVASLDDATPGTTTHGVVTGVEPYGV 596 Query: 467 TVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSV 519 V+L + G + + +VG V A DR + I LS+ Sbjct: 597 FVQLYGNLRGLAGLQDLGLAADQTPQEAFAVGQVVRATVIRSDRGEQKIKLSL 649 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 93/452 (20%), Positives = 176/452 (38%), Gaps = 55/452 (12%) Query: 25 RGVVVAIDKDVVLVDAGLKSESAIPAEQFKN-AQGELEIQVGDEVDVALDAVEDGFGETL 83 GVV + ++ + + A + A +I VG ++V G L Sbjct: 1113 EGVVKEVQSMQAILTLPNGRKGRLHATELAEGAFPMKKIAVGATLNVVTLGPAGDRGNML 1172 Query: 84 LSREKAKRHEAWITLEKA---------------------YEDAETVTGVINGKVKGGFTV 122 + E+ A + + + G+++ + Sbjct: 1173 ELTVRRSVEESREIARAATDAGGGDGSGAGIAGTAALATLSEGDEIDGIVSAVSADTLAI 1232 Query: 123 ELN-GIRAFLPG-----SLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIES 176 + G+ A +P S+ +R + G+ ++ + D R ++V+ R+ + Sbjct: 1233 AVAPGLTARVPKIETGDSIAALRKALTSRFTVGERVKMTALAADVARKKIIVTLRSADKR 1292 Query: 177 ENSAERDQLLENLQEGMEVKGIVKNLTDYG--AFVDLGGVD-GLLHITDMAWKRVKHPSE 233 N+ EG ++ GIV + G FV L G +H+TD+A P + Sbjct: 1293 -----------NVVEGAKIAGIVSKIAPGGGGVFVQLNSRQHGRVHVTDIADDPRSEPWK 1341 Query: 234 IVNVGDEITVKVLKFDRERTRVSLGLKQ-----LGEDPWVAIAKRYPEGTKLTGRVTNLT 288 + +VG+ + V+VL E V L +K G ++ + G ++G V + Sbjct: 1342 LHSVGEAVEVRVLGV-GEGGEVDLSMKSSALKSKGSSNGISSVSQLAPGAHVSGFVKQVN 1400 Query: 289 DYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQ 348 GCFV I V+ V + + T P++ G +V+ +L +DE R + L+ Sbjct: 1401 KGGCFVAISRSVDARVKMCNLADTF-VSDPAQEFPKGKLVKGTILSVDESSGRAEMTLRS 1459 Query: 349 CKANPWQQFAE-----THNKGDRVEGKIKSITDFGIFIGLDG-GIDGLVHLSDISWNVAG 402 + ++ +G G ++ + +G+F+ LDG G GL H+S + Sbjct: 1460 DGMDAAAGRSQIDNNAHVEEGSVQMGTVRRVQTYGVFVTLDGSGRSGLCHISMFADARIK 1519 Query: 403 EEAVREYKKGDEIAAVVLQVDAERERISLGVK 434 + + + G+ + VLQVD E +ISLG+K Sbjct: 1520 DSLEQHVRAGERVRVKVLQVDEETGKISLGMK 1551 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 114/547 (20%), Positives = 193/547 (35%), Gaps = 53/547 (9%) Query: 20 PGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQF------KNAQGELEIQVGDEVDVALD 73 PG +V V A+ D + ++ + + A + G+ V + Sbjct: 306 PGMLVNARVKAVLADGLQMNFMTYFTATVDAFHVGGGVHGAAPDPAAAHKTGERVRARVL 365 Query: 74 AVEDGFGETLLSRE-KAKRHEAWITLEKAYEDAETVTGVINGKVKG--GFTVELNG---- 126 V+ L+ EA + + + +V G +EL Sbjct: 366 YVDAAAKRVGLTLRPHLVTLEASVRAGAMPKPGTIFETAVVRRVDTAIGVLLELKSENEN 425 Query: 127 ---IRAFLPGSLVDVRPVRDTLH--LEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 + S + GK++ +VI + VS ++ + + Sbjct: 426 VHPTFGYCHISDAADEHLDKLEKRFKVGKKVRARVIGSRAMDSVATVSCKSTVLDQPFLS 485 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 LE L GM+V+G V + YGA V L GV L ++ + + V G Sbjct: 486 ----LEELVPGMQVRGEVVAVEPYGAVVKLAPGVKALCPPNHISDIPGRVTNAKVKEGLS 541 Query: 241 ITVKVLKFDRERTRVSLGLKQ---LGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE 297 +V+ DR + R + K+ E P VA GT G VT + YG FV++ Sbjct: 542 AKFRVVSVDRVKGRAVVTHKKQLIRSELPVVASLDDATPGTTTHGVVTGVEPYGVFVQLY 601 Query: 298 EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQ--CKANPWQ 355 + GL + ++ P + VG VV V+ D ++I L L AN Sbjct: 602 GNLRGLAGLQDLGLAADQT-PQEAFAVGQVVRATVIRSDRGEQKIKLSLAPGGAVANGND 660 Query: 356 QFAETHNKGDR---------VEGKIKSI--TDFGIFIGLDGGIDGLVHLSDISWNV-AGE 403 KGD +K + + + L GG+ G+V + +S + G Sbjct: 661 LDGTPGEKGDVGAPEPGTVVESATVKRVDEATGNVQVTLPGGVPGVVTAAQMSDHPLTGA 720 Query: 404 EAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDP-----FNNWVALNKKGAIVTGKV 458 + + GDEI +V ++A+ R L K + ++ GAI G V Sbjct: 721 GLSQAFAPGDEIGPLV-ALEAKPRRSILSRKASLVEAARGGTLPEDISGVVVGAIYPGYV 779 Query: 459 TAVDAK-GATVELADGVEGYLRASEASRDRVE---DATLVLSVGDEVEAKFTGVD--RKN 512 + A G V + G S+ + V D + ++G V A+ VD + Sbjct: 780 ASATANAGVFVRFLGRLTGLAPPSQLTDVPVAGGVDPEEMFALGQTVLARVVSVDATVEP 839 Query: 513 RAISLSV 519 +SLS+ Sbjct: 840 PRLSLSL 846 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 108/561 (19%), Positives = 198/561 (35%), Gaps = 58/561 (10%) Query: 16 IETRPGSIVRGVVVAIDKDVVLVD-------AGLKSESAIPAEQFKNAQGELEIQVGDEV 68 + GS V V + + ++ S + + ++ VG +V Sbjct: 1009 HKLEIGSKVTAEVELVKPEYAVLSLPDHGGAIAYASVNLLNRRFNEDEVETERFAVGRKV 1068 Query: 69 DVALDA---VEDGFGETLLSREKAKRHEAWITLE-KAYEDAETVTGVINGKVKGGFTVEL 124 + LL+ AK ++ + E A + GV+ + L Sbjct: 1069 TAFVAGNAASGSPGDRLLLTVPAAKSNKGAGSGEASAVGAGLAMEGVVKEVQSMQAILTL 1128 Query: 125 -NGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVV--VSRRAVIESENSAE 181 NG + L + + G L + R N++ RR+V ES A Sbjct: 1129 PNGRKGRLHATELAEGAFPMKKIAVGATLNVVTLGPAGDRGNMLELTVRRSVEESREIAR 1188 Query: 182 RD----------------QLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMA 224 L L EG E+ GIV ++ + + G+ + + Sbjct: 1189 AATDAGGGDGSGAGIAGTAALATLSEGDEIDGIVSAVSADTLAIAVAPGLTARVPKIETG 1248 Query: 225 WKRV---KHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLT 281 K + VG+ + + L D R ++ + L+ + + EG K+ Sbjct: 1249 DSIAALRKALTSRFTVGERVKMTALAADVARKKIIVTLRSADK-------RNVVEGAKIA 1301 Query: 282 GRVTNLTDYG--CFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEER 339 G V+ + G FV++ G VHV+++ + P K+ +VG+ VEV VL + E Sbjct: 1302 GIVSKIAPGGGGVFVQLNSRQHGRVHVTDIA-DDPRSEPWKLHSVGEAVEVRVLGV-GEG 1359 Query: 340 RRISLGLKQCKANPW-----QQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLS 394 + L +K G V G +K + G F+ + +D V + Sbjct: 1360 GEVDLSMKSSALKSKGSSNGISSVSQLAPGAHVSGFVKQVNKGGCFVAISRSVDARVKMC 1419 Query: 395 DISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVAL-----NK 449 +++ + +E+ KG + +L VD R + ++ D + + Sbjct: 1420 NLADTFVSD-PAQEFPKGKLVKGTILSVDESSGRAEMTLRSDGMDAAAGRSQIDNNAHVE 1478 Query: 450 KGAIVTGKVTAVDAKGATVELAD-GVEGYLRASEASRDRVED-ATLVLSVGDEVEAKFTG 507 +G++ G V V G V L G G S + R++D + G+ V K Sbjct: 1479 EGSVQMGTVRRVQTYGVFVTLDGSGRSGLCHISMFADARIKDSLEQHVRAGERVRVKVLQ 1538 Query: 508 VDRKNRAISLSVRAKDEADEK 528 VD + ISL ++ AD++ Sbjct: 1539 VDEETGKISLGMKPSLFADDE 1559 Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats. Identities = 108/571 (18%), Positives = 209/571 (36%), Gaps = 79/571 (13%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVD---AGLKSESAIPAEQFKNAQGELE----IQVGDEVD 69 + + G ++GVV A+ + VLVD + + Q NA G+ E G+++ Sbjct: 900 KLKVGEEIKGVVHAVREYGVLVDMPDVDPDAVGLVAFHQLPNANGDNEEPKHPAEGEKIT 959 Query: 70 VALDAVEDGFGET-------------------LLSREKAKRHEAWITLEKAYEDAETVTG 110 + V G L+ + K+ +A E VT Sbjct: 960 GRVLDVSRREGVVDIGARPSLTGAKVGKKGAKALTTAELKKRKAAQAGAHKLEIGSKVTA 1019 Query: 111 VINGKVKGGFTV----ELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNV 166 + VK + V + G A+ +L++ R D + E + KV Sbjct: 1020 EV-ELVKPEYAVLSLPDHGGAIAYASVNLLNRRFNEDEVETERFAVGRKVTAFVAGNAAS 1078 Query: 167 VVSRRAVIESENSAERDQLL-----ENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHI 220 ++ + +A+ ++ + G+ ++G+VK + A + L G G LH Sbjct: 1079 GSPGDRLLLTVPAAKSNKGAGSGEASAVGAGLAMEGVVKEVQSMQAILTLPNGRKGRLHA 1138 Query: 221 TDMAWKRVKHPSEIVNVGDEITVKVLKFDRERT-RVSLGLKQLGEDPWV----------- 268 T++A P + + VG + V L +R + L +++ E+ Sbjct: 1139 TELAEG--AFPMKKIAVGATLNVVTLGPAGDRGNMLELTVRRSVEESREIARAATDAGGG 1196 Query: 269 ----------AIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIH- 317 A EG ++ G V+ ++ + + G+ V E + + Sbjct: 1197 DGSGAGIAGTAALATLSEGDEIDGIVSAVSADTLAIAVAPGLTARVPKIETGDSIAALRK 1256 Query: 318 -PSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITD 376 + VG+ V++ L D R++I + L+ +G ++ G + I Sbjct: 1257 ALTSRFTVGERVKMTALAADVARKKIIVTLRSAD-------KRNVVEGAKIAGIVSKIAP 1309 Query: 377 FG--IFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVK 434 G +F+ L+ G VH++DI+ + E + + G+ + VL V E + L +K Sbjct: 1310 GGGGVFVQLNSRQHGRVHVTDIADDPRSE-PWKLHSVGEAVEVRVLGV-GEGGEVDLSMK 1367 Query: 435 QLAEDPFNNW-----VALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVE 489 A + V+ GA V+G V V+ G V ++ V+ ++ + V Sbjct: 1368 SSALKSKGSSNGISSVSQLAPGAHVSGFVKQVNKGGCFVAISRSVDARVKMCNLADTFVS 1427 Query: 490 DATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 D G V+ VD + +++R Sbjct: 1428 DPAQEFPKGKLVKGTILSVDESSGRAEMTLR 1458 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 108/586 (18%), Positives = 194/586 (33%), Gaps = 98/586 (16%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQG---ELEIQVGDEVDVALD 73 E PG VRG VVA++ +V ++ P + G +++ G + Sbjct: 488 ELVPGMQVRGEVVAVEPYGAVVKLAPGVKALCPPNHISDIPGRVTNAKVKEGLSAKFRVV 547 Query: 74 AVEDGFGETLLSREKAKRHEAWITLEKAYED--AETVTGVINGKVKGGFTVELNG-IRAF 130 +V+ G +++ +K + + T GV+ G G V+L G +R Sbjct: 548 SVDRVKGRAVVTHKKQLIRSELPVVASLDDATPGTTTHGVVTGVEPYGVFVQLYGNLRGL 607 Query: 131 LPGSLVDVRPVRDTLH--LEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQL--- 185 + + + G+ + VI+ D+ + +S N + D Sbjct: 608 AGLQDLGLAADQTPQEAFAVGQVVRATVIRSDRGEQKIKLSLAPGGAVANGNDLDGTPGE 667 Query: 186 ---LENLQEGMEVK-GIVKNLTDYGAFVDL---GGVDGLLHITDMAWKRVK--HPSEIVN 236 + + G V+ VK + + V + GGV G++ M+ + S+ Sbjct: 668 KGDVGAPEPGTVVESATVKRVDEATGNVQVTLPGGVPGVVTAAQMSDHPLTGAGLSQAFA 727 Query: 237 VGDEITVKVLKFDRERTRVSLGLKQLGEDP-----WVAIAKRYPEGTKLTGRVTNLT-DY 290 GDEI ++ + + R L K + G G V + T + Sbjct: 728 PGDEI-GPLVALEAKPRRSILSRKASLVEAARGGTLPEDISGVVVGAIYPGYVASATANA 786 Query: 291 GCFVEIEEGVEGLVHVSEMDWTNK--NIHPSKVVNVGDVVEVMVLDIDEERR--RISLGL 346 G FV + GL S++ + P ++ +G V V+ +D R+SL L Sbjct: 787 GVFVRFLGRLTGLAPPSQLTDVPVAGGVDPEEMFALGQTVLARVVSVDATVEPPRLSLSL 846 Query: 347 ----------------------------------------KQCKANPWQQFAETHNKGDR 366 + + E G+ Sbjct: 847 APRGVAASSGVTAEAPLIRSIFTDVDVADRLADERAASGGEAPEGFLTAAANEKLKVGEE 906 Query: 367 VEGKIKSITDFGIFI---GLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVD 423 ++G + ++ ++G+ + +D GLV + E + +G++I VL V Sbjct: 907 IKGVVHAVREYGVLVDMPDVDPDAVGLVAFHQLPNANGDNEEPKHPAEGEKITGRVLDVS 966 Query: 424 AERE------RISL--------GVKQLAEDPFNNWVA------LNKKGAIVTGKVTAVDA 463 R SL G K L A + G+ VT +V V Sbjct: 967 RREGVVDIGARPSLTGAKVGKKGAKALTTAELKKRKAAQAGAHKLEIGSKVTAEVELVKP 1026 Query: 464 KGATVELAD--GVEGYLRASEASRDRVED--ATLVLSVGDEVEAKF 505 + A + L D G Y + +R ED T +VG +V A Sbjct: 1027 EYAVLSLPDHGGAIAYASVNLLNRRFNEDEVETERFAVGRKVTAFV 1072 Score = 96.9 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 109/629 (17%), Positives = 212/629 (33%), Gaps = 133/629 (21%) Query: 18 TRPGSIVR-GVVVAIDK--DVVLVDAGLKSESAIPAEQFKNAQGE-----LEIQVGDEVD 69 PG++V V +D+ V V + A Q + GDE+ Sbjct: 674 PEPGTVVESATVKRVDEATGNVQVTLPGGVPGVVTAAQMSDHPLTGAGLSQAFAPGDEIG 733 Query: 70 VALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT-------- 121 + A+E ++LSR+ + A E ++GV+ G + G+ Sbjct: 734 PLV-ALEAKPRRSILSRKASLVEAARGGTLP-----EDISGVVVGAIYPGYVASATANAG 787 Query: 122 --VELNG-IRAFLPGSLVDVRPV-----RDTLHLEGKELEFKVIKLD----QKRNNVVVS 169 V G + P S + PV + + G+ + +V+ +D R ++ ++ Sbjct: 788 VFVRFLGRLTGLAPPSQLTDVPVAGGVDPEEMFALGQTVLARVVSVDATVEPPRLSLSLA 847 Query: 170 RRAVIESENSAERDQLL----------------------------------ENLQEGMEV 195 R V S L+ E L+ G E+ Sbjct: 848 PRGVAASSGVTAEAPLIRSIFTDVDVADRLADERAASGGEAPEGFLTAAANEKLKVGEEI 907 Query: 196 KGIVKNLTDYGAFVDLGGVD----GLLHITDMAWKRVKHPS-EIVNVGDEITVKVLKFDR 250 KG+V + +YG VD+ VD GL+ + + + G++IT +VL R Sbjct: 908 KGVVHAVREYGVLVDMPDVDPDAVGLVAFHQLPNANGDNEEPKHPAEGEKITGRVLDVSR 967 Query: 251 -------------------ERTRVSLGLKQLGEDPWVAIAKRY-PEGTKLTGRVTNLTDY 290 ++ +L +L + G+K+T V + Sbjct: 968 REGVVDIGARPSLTGAKVGKKGAKALTTAELKKRKAAQAGAHKLEIGSKVTAEVELVKPE 1027 Query: 291 GCFVEIEEGVEGLVHVSEMDWTNKNIHPSKV----VNVGDVVEVMVLDIDEERR----RI 342 + + + G + + ++ N+ + +V VG V V + R+ Sbjct: 1028 YAVLSLPDH-GGAIAYASVNLLNRRFNEDEVETERFAVGRKVTAFVAG-NAASGSPGDRL 1085 Query: 343 SLGLKQCKANPWQQFAETHNKGD--RVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNV 400 L + K+N E G +EG +K + + L G G +H ++++ Sbjct: 1086 LLTVPAAKSNKGAGSGEASAVGAGLAMEGVVKEVQSMQAILTLPNGRKGRLHATELAEGA 1145 Query: 401 AGEEAVREYKKGDEIAAVVLQVDAERER-ISLGVKQLAEDPFN----------------- 442 +++ G + V L +R + L V++ E+ Sbjct: 1146 F---PMKKIAVGATLNVVTLGPAGDRGNMLELTVRRSVEESREIARAATDAGGGDGSGAG 1202 Query: 443 ----NWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDR---VEDATLVL 495 +A +G + G V+AV A + +A G+ + E + T Sbjct: 1203 IAGTAALATLSEGDEIDGIVSAVSADTLAIAVAPGLTARVPKIETGDSIAALRKALTSRF 1262 Query: 496 SVGDEVEAKFTGVDRKNRAISLSVRAKDE 524 +VG+ V+ D + I +++R+ D+ Sbjct: 1263 TVGERVKMTALAADVARKKIIVTLRSADK 1291 Score = 58.4 bits (140), Expect = 6e-07, Method: Composition-based stats. Identities = 49/309 (15%), Positives = 93/309 (30%), Gaps = 64/309 (20%) Query: 271 AKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDW------------------- 311 K G K+ G VT + D G V + G++G V +E Sbjct: 78 YKNLRVGMKVLGVVTEVNDRGLTVSLPNGLKGTVTRAEASDVLAPASKRGKKGPDGDDPS 137 Query: 312 ---------------TNKNIHPSKVVNVGDVVEVMVLDIDEER---RRISLGLKQCKANP 353 ++ + + + VG ++ V + + + +RI L + + Sbjct: 138 EASESESESEEEDEDEDERLDLTSMFQVGQILRCKVRQLGKGKSGGKRIDLSTRLSQVC- 196 Query: 354 WQQFAETHNKGDRVEGKIKSITDFGIFIGLD--GGIDGLVHLSDISWNVAGEEAVREYKK 411 + G V + S+ D G + G + + V + Sbjct: 197 SNISGHSLTDGMAVPACVNSVEDHGYVLSFGCSDSPTGFLP-----RKSCPQSLVDTLVR 251 Query: 412 GDEIAAVVLQVDAERERIS-----LGVKQLAEDPFNNWVALNKKGA-----------IVT 455 G + V+ + + + + GV Q DP A+ +G +V Sbjct: 252 GSILDVVIAGDEGKDGKRARSKGPGGVMQCTADPKRVAQAVTHEGDGAAMSTLLPGMLVN 311 Query: 456 GKVTAVDAKGATVELADGVEGYL---RASEASRDRVEDATLVLSVGDEVEAKFTGVDRKN 512 +V AV A G + + D G+ V A+ VD Sbjct: 312 ARVKAVLADGLQMNFMTYFTATVDAFHVGGGVHGAAPDPAAAHKTGERVRARVLYVDAAA 371 Query: 513 RAISLSVRA 521 + + L++R Sbjct: 372 KRVGLTLRP 380 >UniRef50_Q6C430 YALI0E30217p n=1 Tax=Yarrowia lipolytica RepID=Q6C430_YARLI Length = 1567 Score = 178 bits (453), Expect = 4e-43, Method: Composition-based stats. Identities = 101/535 (18%), Positives = 201/535 (37%), Gaps = 43/535 (8%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVD- 69 +SL GSI+ G +V I +V + Q A +I+ G+E D Sbjct: 84 QSLSLDNISVGSIILGRIVNIQSTACVVSLPNNLHGFVSCVQVSEAL-NAKIEEGEEFDL 142 Query: 70 ---------VALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 V V+ LS + + + + + K G+ Sbjct: 143 SDYVKEGQWVRASVVDTSNKRLGLSLLPKDVNRDIEDSDI--DANMALQVEVKSKEDKGY 200 Query: 121 TVE--LNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 V + G + F+ D +G+ + V+++ + + + Sbjct: 201 VVATGIKGKKGFI--------KDTDVELNKGQIVLACVLRISGRTITLDTEH-----TGE 247 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNV 237 + + + + G V + + + GA V + G VD + ++ + S + V Sbjct: 248 AVRQLEDFSSAVAGTPVTVVTTDKRNNGAVVSVFGSVDATIDPFQGSFGLEEKTSSVARV 307 Query: 238 GDEITVKVLKFDRERTRVSLG---LKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFV 294 V L R+ L ED I + + G L +VT++ +G FV Sbjct: 308 -----VATLDRGASGKRMLLSALPHVVNLEDADPRIGEAFLPGQVLGVKVTHVVQHGLFV 362 Query: 295 EIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPW 354 E+ E + G +H+S++ ++ + VG ++ ++ + L +Q + Sbjct: 363 ELAENIPGFIHISKL--ADEKTDSTADYEVGQTLDARIIAFAPQDEMYVLSCEQSVMDAK 420 Query: 355 QQFAETHNKGDRVEGKIKS-ITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGD 413 + GD+VEG + + GI + L I +V + + + ++K G Sbjct: 421 YIATSDLSAGDKVEGTVTRHLPKGGIIVALSSFITAVVPAAHL-VDAKMANPELKFKIGS 479 Query: 414 EIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKK-GAIVTGKVTAVDAKGATVELAD 472 +I +L VD+ R+++ K L P +++++ + G I +G V V G VE D Sbjct: 480 KIKGRLLGVDSSGCRMTIK-KSLYNLPKDDFISYASEIGDIGSGTVVNVKPGGCVVEFWD 538 Query: 473 GVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADE 527 + +L A E S + D T VG V+ + ++ + +++ +S + A E Sbjct: 539 NSQAWLPAGEVSEAFIADITKHCRVGQTVKIRILDINPEKQSMQVSCKLSKVAAE 593 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 84/527 (15%), Positives = 184/527 (34%), Gaps = 49/527 (9%) Query: 10 EESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVD 69 ++L + G V G V +++ V V P + V Sbjct: 680 NKTLIKETPSVGQTVTGWVQNVNQHGVFVSF-AGVVGLAPQASLSD----DSYDKFQVVK 734 Query: 70 VALDAVEDGFGETLLSREKAKRHEAWITLEKA------YEDAETVTGVINGKVKGGFTVE 123 + +V + +S K+ A ++ + Y + + G++ + +V Sbjct: 735 GRVTSVNGD--KFAVSIGKSLNGPAVNPVDPSISTIADYSEGKKTEGIVTAVLPSFVSVR 792 Query: 124 L-NGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 L + + S ++ +D ++ V+ + + + ++ V S Sbjct: 793 LSDNQNGRISLSQLETPVEKD------DKISVTVLGPSSQGDQIELATNDVRLS------ 840 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEI 241 + NL+EG G+V T +V L + G L D+ VGD + Sbjct: 841 ---INNLEEGKAYPGVVVQSTADSIWVALSAYIVGRLDRADVQEADFADA-----VGDLV 892 Query: 242 TVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGC-FVEIEEGV 300 V V + ++ ++ + + + A G + + +V+ V Sbjct: 893 EVSVCGIEGDKVKLRGAQSEEKSEGFSEEALPASNGLQGAQVTARVKKIEVDYVQCTINV 952 Query: 301 EGLVHVSEMDW----TNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQ 356 G + + ++ S V ++G+ V ++ + ++ +++ Sbjct: 953 NGKSSTATASLVDAVDDYSLKLSNVYDIGETVPAVICS---AKEPYAICIRKNPEGVDPL 1009 Query: 357 FAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIA 416 + +GD+V+G + I GIF+ + GID V ++++S + + + +K G + Sbjct: 1010 PSLPLKRGDKVKGVVTGIA-AGIFVAIGHGIDARVKITNLSDSFLMD-WKKYFKIGQIVT 1067 Query: 417 AVVLQV-DAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVE 475 ++ D +SL + + D G G V G V + D Sbjct: 1068 GRIMGFSDKGLPDMSLKQRHMTGDKLIEGPQDLTVGQKYDGSVQRTTDYGVFVNIGD-AT 1126 Query: 476 GYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAK 522 G SE + V D + + + GD+V + + +SL ++A Sbjct: 1127 GLCHRSEIADTPVGDCSELFNSGDKVRVIVLKI--EGSKVSLGMKAA 1171 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 102/534 (19%), Positives = 185/534 (34%), Gaps = 67/534 (12%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQ 57 + +S L ++ + G I G VV + +V+ S++ +PA + A Sbjct: 497 IKKSLYNLPKDDFISYASEIGDIGSGTVVNVKPGGCVVEFWDNSQAWLPAGEVSEAFIAD 556 Query: 58 GELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYED---AETVTGVING 114 +VG V + + + +S + A + AYE + VTG I Sbjct: 557 ITKHCRVGQTVKIRILDINPEKQSMQVSCK--LSKVAAEHVSGAYEGISLGDLVTGKIID 614 Query: 115 KVKGGFT------VELNGI--RAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNV 166 K V+L G+ R LP S +R G +LE V+ +++ Sbjct: 615 KRGDFVIEMTVGDVDLTGVVPRNLLPPSHKKLR--------VGDKLECVVLAKQPWMSSM 666 Query: 167 VVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWK 226 + I + + E G V G V+N+ +G FV GV GL ++ Sbjct: 667 TLGAHPDIIKGYH-NKTLIKETPSVGQTVTGWVQNVNQHGVFVSFAGVVGLAPQASLSDD 725 Query: 227 RVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGE-----DPWVAIAKRYPEGTKLT 281 + +V + ++ VS+G G DP ++ Y EG K Sbjct: 726 SYDKF-------QVVKGRVTSVNGDKFAVSIGKSLNGPAVNPVDPSISTIADYSEGKKTE 778 Query: 282 GRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRR 341 G VT + V + + G + +S++ V D + V VL + + Sbjct: 779 GIVTAVLPSFVSVRLSDNQNGRISLSQL---------ETPVEKDDKISVTVLGPSSQGDQ 829 Query: 342 ISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVA 401 I L N + +G G + T I++ L I G + +D+ Sbjct: 830 IELA-----TNDVRLSINNLEEGKAYPGVVVQSTADSIWVALSAYIVGRLDRADVQEADF 884 Query: 402 GEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNN---WVALNKKGAIVTGKV 458 + GD + V ++ ++ ++ + + F+ + +GA VT +V Sbjct: 885 ADA------VGDLVEVSVCGIEGDKVKLRGAQSEEKSEGFSEEALPASNGLQGAQVTARV 938 Query: 459 TAVDAKGATVELADGVEG-----YLRASEASRDRVEDATLVLSVGDEVEAKFTG 507 ++ V+ V G +A D + V +G+ V A Sbjct: 939 KKIEVD--YVQCTINVNGKSSTATASLVDAVDDYSLKLSNVYDIGETVPAVICS 990 Score = 98.1 bits (243), Expect = 8e-19, Method: Composition-based stats. Identities = 72/389 (18%), Positives = 139/389 (35%), Gaps = 45/389 (11%) Query: 171 RAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFV----DLGGVDGLLHITDMAWK 226 + + S+ A + L+N+ G + G + N+ V +L G + +++ Sbjct: 73 KQAVTSDIVAIQSLSLDNISVGSIILGRIVNIQSTACVVSLPNNLHGFVSCVQVSEALNA 132 Query: 227 RVK-----HPSEIVNVGDEITVKVLKFDRERTRVSLGL--KQLGEDPWVAIAKRYPEGTK 279 +++ S+ V G V+ D R+ L L K + D + Sbjct: 133 KIEEGEEFDLSDYVKEGQ--WVRASVVDTSNKRLGLSLLPKDVNRDIEDSDIDAN---MA 187 Query: 280 LTGRVTNLTDYGCFVEIE-EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEE 338 L V + D G V +G +G + K+ +N G +V VL I Sbjct: 188 LQVEVKSKEDKGYVVATGIKGKKGFI---------KDTDVE--LNKGQIVLACVLRI--S 234 Query: 339 RRRISL-GLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDIS 397 R I+L +A + + G V + G + + G +D + S Sbjct: 235 GRTITLDTEHTGEAVRQLEDFSSAVAGTPVTVVTTDKRNNGAVVSVFGSVDATIDPFQGS 294 Query: 398 WNVAGEEAVREYKKGDEIAAVVLQVDAER--ERISLGVKQLA---EDPFNNWVALNKKGA 452 + + + + +A VV +D +R+ L ED G Sbjct: 295 FGLEEKTSS--------VARVVATLDRGASGKRMLLSALPHVVNLEDADPRIGEAFLPGQ 346 Query: 453 IVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKN 512 ++ KVT V G VELA+ + G++ S+ + ++ D+T VG ++A+ ++ Sbjct: 347 VLGVKVTHVVQHGLFVELAENIPGFIHISKLADEK-TDSTADYEVGQTLDARIIAFAPQD 405 Query: 513 RAISLSVRAKDEADEKDAIATVNKQEDAN 541 LS + A + ++ + Sbjct: 406 EMYVLSCEQSVMDAKYIATSDLSAGDKVE 434 >UniRef50_Q7XYL3 Ribosomal protein rpS1 n=1 Tax=Bigelowiella natans RepID=Q7XYL3_BIGNA Length = 419 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 73/270 (27%), Positives = 131/270 (48%), Gaps = 16/270 (5%) Query: 3 ESFAQLFEES-LKEIETRPGSIVRGVVVAID-KDVVLVDAGLKSESAIPAEQFK--NAQG 58 + F L EE+ L + + V G V+++D K VD G KS + +P + + Sbjct: 114 KDFDNLLEENKLPSFDAL--TTVTGTVISLDSKGGAYVDVGAKSLAYLPRGEISMGGMKA 171 Query: 59 ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 E + G + D + + +LS ++ AW + + E T++G I +G Sbjct: 172 EDVLFPGLKRDFTVSKASTMASDVVLSIKRMLIPTAWTRVRQMAELDVTLSGKILSHNRG 231 Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 GF +E++ ++ FLP S + +D + GK + K +++D + +V+S R + Sbjct: 232 GFIIEVDSLQGFLPFSQMATSVDKD--EMIGKVIPVKFLEVDMENQRLVMSNRRAV---- 285 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVG 238 +N + G V G V L YGAF++LGGV+GLLHI+ ++ V ++++VG Sbjct: 286 ---ASSFKKNYKVGDVVVGTVTALKPYGAFINLGGVNGLLHISQISHDHVTSVKDVMDVG 342 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWV 268 ++ V ++ D + RVSL K+L + Sbjct: 343 QKLKVMIMSRD-QNGRVSLSTKRLEPNAGD 371 Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats. Identities = 64/277 (23%), Positives = 111/277 (40%), Gaps = 19/277 (6%) Query: 278 TKLTGRVTNL-TDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDID 336 T +TG V +L + G +V++ + E+ + V+ G + V Sbjct: 132 TTVTGTVISLDSKGGAYVDVGAKSLAYLPRGEISMG--GMKAEDVLFPGLKRDFTVSKAS 189 Query: 337 EERRRISLGLKQCK-ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSD 395 + L +K+ W + + + GKI S G I +D + G + S Sbjct: 190 TMASDVVLSIKRMLIPTAWTRVRQMAELDVTLSGKILSHNRGGFIIEVDS-LQGFLPFSQ 248 Query: 396 ISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVT 455 ++ +V +E G I L+VD E +R+ + ++ +++ K G +V Sbjct: 249 MATSVDKDEM-----IGKVIPVKFLEVDMENQRLVMSNRRAVA---SSFKKNYKVGDVVV 300 Query: 456 GKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAI 515 G VTA+ GA + L GV G L S+ S D V V+ VG +++ D +N + Sbjct: 301 GTVTALKPYGAFINLG-GVNGLLHISQISHDHVTSVKDVMDVGQKLKVMIMSRD-QNGRV 358 Query: 516 SLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFK 552 SLS + E +A + + MA FK Sbjct: 359 SLSTKRL----EPNAGDMLRSPQLVFEKAEEMAARFK 391 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 56/259 (21%), Positives = 112/259 (43%), Gaps = 16/259 (6%) Query: 100 KAYEDAETVTGVINGKV-KGGFTVELN-GIRAFLPGSLVDVRPVR-DTLHLEGKELEFKV 156 +++ TVTG + KGG V++ A+LP + + ++ + + G + +F V Sbjct: 126 PSFDALTTVTGTVISLDSKGGAYVDVGAKSLAYLPRGEISMGGMKAEDVLFPGLKRDFTV 185 Query: 157 IKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDG 216 K ++VV+S + ++ R + + L + G + + G +++ + G Sbjct: 186 SKASTMASDVVLSIKRMLIPTAWT-RVRQMAELDV--TLSGKILSHNRGGFIIEVDSLQG 242 Query: 217 LLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPE 276 L + MA + +G I VK L+ D E R+ + ++ + K Sbjct: 243 FLPFSQMA----TSVDKDEMIGKVIPVKFLEVDMENQRLVMSNRRAVASSFKKNYKVGDV 298 Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDID 336 L YG F+ + GV GL+H+S++ + V++VG ++VM++ D Sbjct: 299 VVGTVTA---LKPYGAFINLG-GVNGLLHISQISH-DHVTSVKDVMDVGQKLKVMIMSRD 353 Query: 337 EERRRISLGLKQCKANPWQ 355 + R+SL K+ + N Sbjct: 354 -QNGRVSLSTKRLEPNAGD 371 >UniRef50_C5DF89 KLTH0D13156p n=2 Tax=Saccharomycetaceae RepID=C5DF89_LACTC Length = 1731 Score = 178 bits (452), Expect = 5e-43, Method: Composition-based stats. Identities = 105/569 (18%), Positives = 213/569 (37%), Gaps = 57/569 (10%) Query: 26 GVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL---EIQVGDEVDVALDAVEDGFGET 82 G V ++ + V V + + +++ + V V L +D Sbjct: 800 GYVKSVSEKGVFVAFNGQFVGLVLPSYAVDSRDVSLSSKFYVNQSVSAFLLRTDDDNERF 859 Query: 83 LLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF-----------------TVELN 125 LLS ++ K ++ T E V I + V + Sbjct: 860 LLSFKEPKNEKSSKTPESERPAINPVDQSIKEVSEFALGKVTKAKVKAVKKNQLNVVLSD 919 Query: 126 GIRAFLPGSLVDVRP--VRDTLHL-----EGKELEFKVIKLD--QKRNNVVVSRRAVIES 176 + + S V + ++D +G L+ KVI + + VS R+ Sbjct: 920 NLHGRIDISEVFDKFEDIKDPKKPLATFKKGDVLDVKVIGFHDVKSHKFLPVSHRSSKNV 979 Query: 177 ENSAERD---------QLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWK 226 +++++ G + G V N++ ++ + + + D+A + Sbjct: 980 LIELSAKPSSLAGVNHATIKDVKVGDSIVGFVNNVSKDIMWLTVSPSLKAKIDFFDLADE 1039 Query: 227 RVKH---PSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGR 283 + + +G + KV+ D++R +S+ + + K G L R Sbjct: 1040 NSQLGHGIEDSFPLGCALRTKVVSIDQDRNTLSVSARTHD----IKGIKDINVGDCLPAR 1095 Query: 284 VTNLTDYGCFVEIEEGVEGLVHVSE-MDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRI 342 + +TD +E+ E V G+ ++ +D +K + +V V+ ID++ ++ Sbjct: 1096 LLKITDSYLLLELGENVRGVAFATDALDDYSKPLKDVYANQKNSIVSAKVISIDKDDGKL 1155 Query: 343 SLGLK-QCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVA 401 +L L+ + + + E +GD V G +K IT+ GIFI L + V +S ++ + Sbjct: 1156 NLSLRSENPRDGTAKTHEDLKRGDVVRGLVKKITEKGIFIYLSSTLQAFVPVSKLTDSFI 1215 Query: 402 GEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNK---KGAIVTGKV 458 ++ + +K + V+ D + I + +K+ + + G I G V Sbjct: 1216 -KDWRKFFKPMQSVVGKVVNCD-DDSHILVTLKESEVNGELRILKSYNDIKVGEIFEGAV 1273 Query: 459 TAVDAKGATVELAD--GVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAIS 516 V G V+L + V G +E + V D + VGD+V+A V+ + +S Sbjct: 1274 KNVTDFGLFVKLDNTVNVTGLAHKTEVADSAVGDLASIFGVGDKVKAIVLKVNPDKKQLS 1333 Query: 517 LSVRAK--DEADEKDAIATVNKQEDANFS 543 L ++A E++E A E + S Sbjct: 1334 LGLKASYFKESNENQASDDAEGDEGSESS 1362 Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats. Identities = 106/589 (17%), Positives = 233/589 (39%), Gaps = 74/589 (12%) Query: 11 ESLKEIETRPGSIVRG-VVVAIDKDVVLVDA-GLKSESAIPAEQFKNAQ---GELEIQVG 65 E L+ I+ G+IV G + + + + G + ++ +P + + E + ++G Sbjct: 501 EYLRPIDIPVGTIVPGCEITEVSDKGIKLSIFGGQFKATVPPLHISDIRLVYPERKFKIG 560 Query: 66 DEVDVALDAVEDGFGETLLSREKA---------KRHEAWITLEKAYEDAETVTGVINGKV 116 +V L + G+ +S +K+ + ++ +EK + ++ Sbjct: 561 SKVKGILINATER-GQLFMSLKKSLVNLDREETELASSFEDIEKIASSDSKLAATVDIFK 619 Query: 117 KGGFTVEL-NGIRAFLPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRAV 173 G V NG+R FLP S + V+ G+ + KV++ ++++N V+V+ + Sbjct: 620 PNGCIVSFLNGLRGFLPNSNISEAYVKRPQDHLRLGQTVIVKVLQHNKEQNRVIVTCK-- 677 Query: 174 IESENSAERDQLLENLQEG-MEVKGIVKNLTDYGAFVD-LG-GVDGLLHITDMAWKRVKH 230 + SE ++ + + +EN+ G +K V T V+ +G G+ G++++ ++ RV+ Sbjct: 678 VSSEAASLQREAIENMIVGRSIIKVAVVEKTKDSIVVEQVGTGLRGVVYVGHLSDSRVEQ 737 Query: 231 PS---EIVNVGDEITVKVLKFDRERTRVSLGLKQ-LGEDPWVAIAKRYPEG-------TK 279 + + +G E+ V+ D +L K+ L +D ++ + + Sbjct: 738 NRAQLKKLKIGSELEGLVIDKDERTRVFNLSCKKSLMKDAEKSLLPLNYQDVKQRGNHSP 797 Query: 280 LTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEER 339 G V ++++ G FV GLV S ++++ S V V +L D++ Sbjct: 798 FNGYVKSVSEKGVFVAFNGQFVGLVLPS-YAVDSRDVSLSSKFYVNQSVSAFLLRTDDDN 856 Query: 340 RRISLGLKQCKANPWQQFAETHNKG-DRVEGKIKSITDFGIF----------------IG 382 R L K+ K + E+ + V+ IK +++F + + Sbjct: 857 ERFLLSFKEPKNEKSSKTPESERPAINPVDQSIKEVSEFALGKVTKAKVKAVKKNQLNVV 916 Query: 383 LDGGIDGLVHLSDISWNVAG----EEAVREYKKGDEIAAVVLQV-DAERER--------- 428 L + G + +S++ ++ + +KKGD + V+ D + + Sbjct: 917 LSDNLHGRIDISEVFDKFEDIKDPKKPLATFKKGDVLDVKVIGFHDVKSHKFLPVSHRSS 976 Query: 429 ----ISLGVKQLAEDPFNNW-VALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEA 483 I L K + N+ + K G + G V V + ++ ++ + + Sbjct: 977 KNVLIELSAKPSSLAGVNHATIKDVKVGDSIVGFVNNVSKDIMWLTVSPSLKAKIDFFDL 1036 Query: 484 SRDRVE---DATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKD 529 + + + +G + K +D+ +S+S R D KD Sbjct: 1037 ADENSQLGHGIEDSFPLGCALRTKVVSIDQDRNTLSVSARTHDIKGIKD 1085 Score = 150 bits (380), Expect = 9e-35, Method: Composition-based stats. Identities = 94/464 (20%), Positives = 192/464 (41%), Gaps = 49/464 (10%) Query: 10 EESLKEI-ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE------- 61 ++S+KE+ E G + + V A+ K+ + V I + + +++ Sbjct: 886 DQSIKEVSEFALGKVTKAKVKAVKKNQLNVVLSDNLHGRIDISEVFDKFEDIKDPKKPLA 945 Query: 62 -IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYED--------------AE 106 + GD +DV + D L I L + Sbjct: 946 TFKKGDVLDVKVIGFHDVKSHKFLPVSHRSSKNVLIELSAKPSSLAGVNHATIKDVKVGD 1005 Query: 107 TVTGVINGKVKGGFTVELN-----GIRAF-LPGSLVDVRPVRDTLHLEGKELEFKVIKLD 160 ++ G +N K + ++ I F L + + G L KV+ +D Sbjct: 1006 SIVGFVNNVSKDIMWLTVSPSLKAKIDFFDLADENSQLGHGIEDSFPLGCALRTKVVSID 1065 Query: 161 QKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLH 219 Q RN + VS R + ++++ G + + +TD ++LG V G+ Sbjct: 1066 QDRNTLSVSAR--------THDIKGIKDINVGDCLPARLLKITDSYLLLELGENVRGVAF 1117 Query: 220 ITDMAWKRVKHPSEIV--NVGDEITVKVLKFDRERTRVSLGLKQLGE-DPWVAIAKRYPE 276 TD K ++ ++ KV+ D++ +++L L+ D + Sbjct: 1118 ATDALDDYSKPLKDVYANQKNSIVSAKVISIDKDDGKLNLSLRSENPRDGTAKTHEDLKR 1177 Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDID 336 G + G V +T+ G F+ + ++ V VS++ + K V V++ D Sbjct: 1178 GDVVRGLVKKITEKGIFIYLSSTLQAFVPVSKLTDSF-IKDWRKFFKPMQSVVGKVVNCD 1236 Query: 337 EERRRISLGLKQCKANPWQQFAETHN---KGDRVEGKIKSITDFGIFIGLDG--GIDGLV 391 ++ I + LK+ + N + +++N G+ EG +K++TDFG+F+ LD + GL Sbjct: 1237 DDSH-ILVTLKESEVNGELRILKSYNDIKVGEIFEGAVKNVTDFGLFVKLDNTVNVTGLA 1295 Query: 392 HLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQ 435 H ++++ + G+ + GD++ A+VL+V+ +++++SLG+K Sbjct: 1296 HKTEVADSAVGD-LASIFGVGDKVKAIVLKVNPDKKQLSLGLKA 1338 Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 96/576 (16%), Positives = 200/576 (34%), Gaps = 53/576 (9%) Query: 20 PGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQ----FKNAQGELEIQVGDEVDVAL--- 72 PG V + + V+ + + Q + +++ + +G V + Sbjct: 337 PGQAVDFLCQKKTSNGVIGKVFGLVDGFLNISQQAIFYTDSKSDQAYPIGSNTRVRIIAS 396 Query: 73 DAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVT-----GVINGKVKGGFTVELNGI 127 + G +LS + A T + +A V + G+ F ++LN Sbjct: 397 LKNKSGDKFVILSDLPSVLSLASETSGNSALEAFPVGYTFENCEVKGRDSQYFYLKLN-- 454 Query: 128 RAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLE 187 + FL + + E+ +V+ D ++ + + Sbjct: 455 KDFLGRVHLS----KTGEQEPSGEVSARVLGYDSFDGYYQLATDPKVIAVEYLRPI---- 506 Query: 188 NLQEGMEVKGI-VKNLTDYGAFVDLGG--VDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 ++ G V G + ++D G + + G + ++ R+ +P +G ++ Sbjct: 507 DIPVGTIVPGCEITEVSDKGIKLSIFGGQFKATVPPLHISDIRLVYPERKFKIGSKVKGI 566 Query: 245 VLKFDRERTRVSLGLKQLGED----------PWVAIAKRYPEGTKLTGRVTNLTDYGCFV 294 ++ ER ++ + LK+ + + I K +KL V GC V Sbjct: 567 LINA-TERGQLFMSLKKSLVNLDREETELASSFEDIEKIASSDSKLAATVDIFKPNGCIV 625 Query: 295 EIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP- 353 G+ G + S + P + +G V V VL ++E+ R+ + K Sbjct: 626 SFLNGLRGFLPNSNISEAY-VKRPQDHLRLGQTVIVKVLQHNKEQNRVIVTCKVSSEAAS 684 Query: 354 --WQQFAETHNKGDRVEGKIKSITDFGIFIG-LDGGIDGLVHLSDISWNVAGEEA--VRE 408 + ++ + T I + + G+ G+V++ +S + + +++ Sbjct: 685 LQREAIENMIVGRSIIKVAVVEKTKDSIVVEQVGTGLRGVVYVGHLSDSRVEQNRAQLKK 744 Query: 409 YKKGDEIAAVVLQVDAERERISLGVKQ-LAEDPFNNWVALNKKG-------AIVTGKVTA 460 K G E+ +V+ D +L K+ L +D + + LN + + G V + Sbjct: 745 LKIGSELEGLVIDKDERTRVFNLSCKKSLMKDAEKSLLPLNYQDVKQRGNHSPFNGYVKS 804 Query: 461 VDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 V KG V G + S A R + V V A D N LS + Sbjct: 805 VSEKGVFVAFNGQFVGLVLPSYAVDSRDVSLSSKFYVNQSVSAFLLRTDDDNERFLLSFK 864 Query: 521 AKDEADEKDAIATVNKQEDANFSNNAMAEAFKAAKG 556 +EK + +++ N + ++ E + A G Sbjct: 865 EPK--NEKSSKTPESERPAINPVDQSIKEVSEFALG 898 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 94/574 (16%), Positives = 196/574 (34%), Gaps = 61/574 (10%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAG-LKSESAIPAEQFKNAQGELEIQVGDEVD 69 L E + ++ V +I+ ++D G I ++ ++ G Sbjct: 246 NQLIEEDLARNCTIQCAVKSIEDHGAILDVGMDGITGFISKKECESLP---NFAPGTVFL 302 Query: 70 VALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNG-IR 128 + + K + I+ A + V + K G ++ G + Sbjct: 303 ANVAKKSGRTVTVNFEFKNKKSKVSQISSVDAVIPGQAVDFLCQKKTSNGVIGKVFGLVD 362 Query: 129 AFLPGSLVDVRPVR---DTLHLEGKELEFKVI----KLDQKRNNVVVSRRAVIESENSAE 181 FL S + D + G ++I + ++ +V+ + Sbjct: 363 GFLNISQQAIFYTDSKSDQAYPIGSNTRVRIIASLKNKSGDKFVILSDLPSVLSLASETS 422 Query: 182 RDQLLENLQEGMEVK-GIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGD 239 + LE G + VK ++ L G +H++ + Sbjct: 423 GNSALEAFPVGYTFENCEVKGRDSQYFYLKLNKDFLGRVHLSKTGEQ---------EPSG 473 Query: 240 EITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKR-----YPEGTK-LTGRVTNLTDYGCF 293 E++ +VL +D QL DP V + P GT +T ++D G Sbjct: 474 EVSARVLGYDSFDG-----YYQLATDPKVIAVEYLRPIDIPVGTIVPGCEITEVSDKGIK 528 Query: 294 VEIEEGV----EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC 349 + I G +H+S++ + ++P + +G V+ ++++ ER ++ + LK+ Sbjct: 529 LSIFGGQFKATVPPLHISDI----RLVYPERKFKIGSKVKGILINA-TERGQLFMSLKKS 583 Query: 350 KAN----------PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWN 399 N ++ + + ++ + G + G+ G + S+IS Sbjct: 584 LVNLDREETELASSFEDIEKIASSDSKLAATVDIFKPNGCIVSFLNGLRGFLPNSNISEA 643 Query: 400 VAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPF--NNWVALNKKG-AIVTG 456 + + G + VLQ + E+ R+ + K +E + G +I+ Sbjct: 644 YV-KRPQDHLRLGQTVIVKVLQHNKEQNRVIVTCKVSSEAASLQREAIENMIVGRSIIKV 702 Query: 457 KVTAVDAKGATVE-LADGVEGYLRASEASRDRVEDAT---LVLSVGDEVEAKFTGVDRKN 512 V VE + G+ G + S RVE L +G E+E D + Sbjct: 703 AVVEKTKDSIVVEQVGTGLRGVVYVGHLSDSRVEQNRAQLKKLKIGSELEGLVIDKDERT 762 Query: 513 RAISLSVRAKDEADEKDAIATVNKQEDANFSNNA 546 R +LS + D + ++ +N Q+ N++ Sbjct: 763 RVFNLSCKKSLMKDAEKSLLPLNYQDVKQRGNHS 796 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 84/499 (16%), Positives = 166/499 (33%), Gaps = 71/499 (14%) Query: 72 LDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN--GIRA 129 LD LS E + ++ +E+ T+ + G +++ GI Sbjct: 226 LDKNSKKQKRIELSIEPSATNQL---IEEDLARNCTIQCAVKSIEDHGAILDVGMDGITG 282 Query: 130 FL--------PGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 F+ P + + G+ + + K VS+ + +++ + Sbjct: 283 FISKKECESLPNFAPGTVFLANVAKKSGRTVTV---NFEFKNKKSKVSQISSVDAVIPGQ 339 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSE-IVNVGDE 240 L + V G V +G VDG L+I+ A S+ +G Sbjct: 340 AVDFLCQKKTSNGVIGKV-----FGL------VDGFLNISQQAIFYTDSKSDQAYPIGSN 388 Query: 241 ITVKVLKFDRER---TRVSLG-----LKQLGEDPWVAIAKRYPEGTKLT-GRVTNLTDYG 291 V+++ + + V L L E + + +P G V Sbjct: 389 TRVRIIASLKNKSGDKFVILSDLPSVLSLASETSGNSALEAFPVGYTFENCEVKGRDSQY 448 Query: 292 CFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKA 351 ++++ + G VH+S+ + V VL D L Sbjct: 449 FYLKLNKDFLGRVHLSKTGEQEPSG----------EVSARVLGYDSFDGYYQLATDPKVI 498 Query: 352 NPWQQFAETHNKGDRVEGK-IKSITDFGIFIGLDGG-----IDGLVHLSDISWNVAGEEA 405 G V G I ++D GI + + GG + L H+SDI Sbjct: 499 AVEYLRPIDIPVGTIVPGCEITEVSDKGIKLSIFGGQFKATVPPL-HISDI----RLVYP 553 Query: 406 VREYKKGDEIAAVVLQVDAERERISLGVKQLAED----------PFNNWVALNKKGAIVT 455 R++K G ++ +++ ER ++ + +K+ + F + + + + Sbjct: 554 ERKFKIGSKVKGILINA-TERGQLFMSLKKSLVNLDREETELASSFEDIEKIASSDSKLA 612 Query: 456 GKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAI 515 V G V +G+ G+L S S V+ L +G V K +++ + Sbjct: 613 ATVDIFKPNGCIVSFLNGLRGFLPNSNISEAYVKRPQDHLRLGQTVIVKVLQHNKEQNRV 672 Query: 516 SLSVRAKDEAD--EKDAIA 532 ++ + EA +++AI Sbjct: 673 IVTCKVSSEAASLQREAIE 691 Score = 59.2 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 30/192 (15%), Positives = 70/192 (36%), Gaps = 13/192 (6%) Query: 14 KEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE---LEIQVGDEVDV 70 + + G +VRG+V I + + + ++ +P + ++ + + V Sbjct: 1171 THEDLKRGDVVRGLVKKITEKGIFIYLSSTLQAFVPVSKLTDSFIKDWRKFFKPMQSVVG 1230 Query: 71 ALDAVEDGFGETLLSREKAKRHEAWITLEKAYED---AETVTGVINGKVKGGFTVELN-- 125 + +D +L K + + K+Y D E G + G V+L+ Sbjct: 1231 KVVNCDDDSH--ILVTLKESEVNGELRILKSYNDIKVGEIFEGAVKNVTDFGLFVKLDNT 1288 Query: 126 -GIRAFLPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 + + V V D + G +++ V+K++ + + + +A E++ + Sbjct: 1289 VNVTGLAHKTEVADSAVGDLASIFGVGDKVKAIVLKVNPDKKQLSLGLKASYFKESNENQ 1348 Query: 183 DQLLENLQEGME 194 EG E Sbjct: 1349 ASDDAEGDEGSE 1360 >UniRef50_D2AQV7 30S ribosomal protein S1 n=5 Tax=Actinomycetales RepID=D2AQV7_STRRD Length = 294 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 65/253 (25%), Positives = 108/253 (42%), Gaps = 11/253 (4%) Query: 276 EGTKLTGRVTNLTDYGCFVEIE---EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMV 332 G LTG V +T V ++ G + ++ W + ++++ VG V V Sbjct: 19 VGDVLTGTVAEVTRSQTTVLLDAFTSDPVGSISWLDLSWRSFGRPAAEILEVGAKVSSEV 78 Query: 333 LDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGID---- 388 + +D + RR+ L + + + G R+ G + +I FG+F+ LD G D Sbjct: 79 IAVDLQERRVRLSWSATENPQLWAYLKALRPGQRLSGTVAAIERFGVFVDLDDGPDHPVF 138 Query: 389 ---GLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWV 445 G + + ++SW E+ G+ I+ VL D + ++ DPF + Sbjct: 139 PGVGFITMPELSWRRF-EDPSEVVSVGERISCEVLTFDTHNGEARVSLRATQPDPFQQFA 197 Query: 446 ALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKF 505 G I+ G VT V GA V +AD EG + SE + V A + +GDEV Sbjct: 198 RGVHVGQILYGPVTKVVPFGAFVRVADDAEGLVHLSELTALPVAAALDAVQIGDEVTVIV 257 Query: 506 TGVDRKNRAISLS 518 +D R ++LS Sbjct: 258 IEIDPLRRRLALS 270 Score = 175 bits (443), Expect = 6e-42, Method: Composition-based stats. Identities = 71/278 (25%), Positives = 131/278 (47%), Gaps = 14/278 (5%) Query: 177 ENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVD----GLLHITDMAWKRVKHPS 232 E+ L + G + G V +T V L G + D++W+ P+ Sbjct: 5 EHEQSLAAFLRTVNVGDVLTGTVAEVTRSQTTVLLDAFTSDPVGSISWLDLSWRSFGRPA 64 Query: 233 -EIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYG 291 EI+ VG +++ +V+ D + RV L A K G +L+G V + +G Sbjct: 65 AEILEVGAKVSSEVIAVDLQERRVRLSWSATENPQLWAYLKALRPGQRLSGTVAAIERFG 124 Query: 292 CFVEIEEGVE-------GLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISL 344 FV++++G + G + + E+ W + PS+VV+VG+ + VL D + Sbjct: 125 VFVDLDDGPDHPVFPGVGFITMPELSW-RRFEDPSEVVSVGERISCEVLTFDTHNGEARV 183 Query: 345 GLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEE 404 L+ + +P+QQFA + G + G + + FG F+ + +GLVHLS+++ + Sbjct: 184 SLRATQPDPFQQFARGVHVGQILYGPVTKVVPFGAFVRVADDAEGLVHLSELTA-LPVAA 242 Query: 405 AVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFN 442 A+ + GDE+ +V+++D R R++L Q A ++ Sbjct: 243 ALDAVQIGDEVTVIVIEIDPLRRRLALSRCQAAMKTWD 280 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 79/286 (27%), Positives = 132/286 (46%), Gaps = 28/286 (9%) Query: 89 AKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFL--P---GSLVDV----- 138 A+ ++ + + +TG + + TV L+ AF P S +D+ Sbjct: 4 AEHEQSLAAFLRTVNVGDVLTGTVAEVTRSQTTVLLD---AFTSDPVGSISWLDLSWRSF 60 Query: 139 -RPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKG 197 RP + L G ++ +VI +D + V R + + + L+ L+ G + G Sbjct: 61 GRPAAEILE-VGAKVSSEVIAVDLQERRV----RLSWSATENPQLWAYLKALRPGQRLSG 115 Query: 198 IVKNLTDYGAFVDLG-GVD-------GLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFD 249 V + +G FVDL G D G + + +++W+R + PSE+V+VG+ I+ +VL FD Sbjct: 116 TVAAIERFGVFVDLDDGPDHPVFPGVGFITMPELSWRRFEDPSEVVSVGERISCEVLTFD 175 Query: 250 RERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEM 309 + L+ DP+ A+ G L G VT + +G FV + + EGLVH+SE+ Sbjct: 176 THNGEARVSLRATQPDPFQQFARGVHVGQILYGPVTKVVPFGAFVRVADDAEGLVHLSEL 235 Query: 310 DWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQ 355 V +GD V V+V++ID RRR++L Q W Sbjct: 236 T-ALPVAAALDAVQIGDEVTVIVIEIDPLRRRLALSRCQAAMKTWD 280 Score = 121 bits (305), Expect = 4e-26, Method: Composition-based stats. Identities = 57/280 (20%), Positives = 108/280 (38%), Gaps = 27/280 (9%) Query: 10 EESLKEI--ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA-------QGEL 60 E+SL G ++ G V + + V + + + + + Sbjct: 7 EQSLAAFLRTVNVGDVLTGTVAEVTRSQTTVLLDAFTSDPVGSISWLDLSWRSFGRPAAE 66 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 ++VG +V + AV+ LS + + W L+ A + ++G + + G Sbjct: 67 ILEVGAKVSSEVIAVDLQERRVRLSWSATENPQLWAYLK-ALRPGQRLSGTVAAIERFGV 125 Query: 121 TVELN---------GIRAFLPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVS 169 V+L+ G+ F+ + R D + G+ + +V+ D VS Sbjct: 126 FVDLDDGPDHPVFPGV-GFITMPELSWRRFEDPSEVVSVGERISCEVLTFDTHNGEARVS 184 Query: 170 RRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRV 228 RA Q + G + G V + +GAFV + +GL+H++++ V Sbjct: 185 LRA----TQPDPFQQFARGVHVGQILYGPVTKVVPFGAFVRVADDAEGLVHLSELTALPV 240 Query: 229 KHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWV 268 + V +GDE+TV V++ D R R++L Q W Sbjct: 241 AAALDAVQIGDEVTVIVIEIDPLRRRLALSRCQAAMKTWD 280 Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 44/181 (24%), Positives = 77/181 (42%), Gaps = 10/181 (5%) Query: 360 THNKGDRVEGKIKSITDFGIFIGLDGGID---GLVHLSDISWNVAGEEAVREYKKGDEIA 416 T N GD + G + +T + LD G + D+SW G A + G +++ Sbjct: 16 TVNVGDVLTGTVAEVTRSQTTVLLDAFTSDPVGSISWLDLSWRSFGRPAAEILEVGAKVS 75 Query: 417 AVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVE- 475 + V+ VD + R+ L ++ + G ++G V A++ G V+L DG + Sbjct: 76 SEVIAVDLQERRVRLSWSATENPQLWAYLKALRPGQRLSGTVAAIERFGVFVDLDDGPDH 135 Query: 476 ------GYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKD 529 G++ E S R ED + V+SVG+ + + D N +S+RA + Sbjct: 136 PVFPGVGFITMPELSWRRFEDPSEVVSVGERISCEVLTFDTHNGEARVSLRATQPDPFQQ 195 Query: 530 A 530 Sbjct: 196 F 196 Score = 41.9 bits (97), Expect = 0.060, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 35/99 (35%), Gaps = 4/99 (4%) Query: 444 WVALNKKGAIVTGKVTAVDAKGATV---ELADGVEGYLRASEASRDRVEDAT-LVLSVGD 499 ++ G ++TG V V TV G + + S +L VG Sbjct: 13 FLRTVNVGDVLTGTVAEVTRSQTTVLLDAFTSDPVGSISWLDLSWRSFGRPAAEILEVGA 72 Query: 500 EVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQE 538 +V ++ VD + R + LS A + + + + Sbjct: 73 KVSSEVIAVDLQERRVRLSWSATENPQLWAYLKALRPGQ 111 >UniRef50_A9WG06 RNA binding S1 domain protein n=3 Tax=Chloroflexus RepID=A9WG06_CHLAA Length = 554 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 60/185 (32%), Positives = 106/185 (57%), Gaps = 4/185 (2%) Query: 164 NNVVVSRRAVIESENSA--ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHIT 221 NN +V + E+ N +R Q L L G V G V + YGA ++LGG++G +H+ Sbjct: 357 NNGIVPETVLSETYNERIRQRRQRLAGLTIGQIVNGSVLRVLRYGAVIELGGIEGFVHVG 416 Query: 222 DMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLT 281 ++ W+ + ++ G EI + D +R R +L ++++ DPW+A+A++ G ++ Sbjct: 417 EIDWRWIGDARHALHPGQEIQAVITGIDEQRLRANLSMRRVHPDPWLAVAQQLNAGMQVQ 476 Query: 282 GRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRR 341 G V +TD+G F+E+ GV+GL H+S++ + + + ++G V+ +L ID ERRR Sbjct: 477 GTVAGITDFGIFIELLPGVQGLAHISQIPPDQQPLK--QAFSLGRRVQTTILSIDHERRR 534 Query: 342 ISLGL 346 I+L L Sbjct: 535 IALSL 539 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 3/159 (1%) Query: 361 HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL 420 G V G + + +G I L GGI+G VH+ +I W G+ A G EI AV+ Sbjct: 384 LTIGQIVNGSVLRVLRYGAVIEL-GGIEGFVHVGEIDWRWIGD-ARHALHPGQEIQAVIT 441 Query: 421 QVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRA 480 +D +R R +L ++++ DP+ G V G V + G +EL GV+G Sbjct: 442 GIDEQRLRANLSMRRVHPDPWLAVAQQLNAGMQVQGTVAGITDFGIFIELLPGVQGLAHI 501 Query: 481 SEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSV 519 S+ D+ + S+G V+ +D + R I+LS+ Sbjct: 502 SQIPPDQ-QPLKQAFSLGRRVQTTILSIDHERRRIALSL 539 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 5/165 (3%) Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDID 336 G + G V + YG +E+ G+EG VHV E+DW ++ G ++ ++ ID Sbjct: 387 GQIVNGSVLRVLRYGAVIELG-GIEGFVHVGEIDWRWIG-DARHALHPGQEIQAVITGID 444 Query: 337 EERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDI 396 E+R R +L +++ +PW A+ N G +V+G + ITDFGIFI L G+ GL H+S I Sbjct: 445 EQRLRANLSMRRVHPDPWLAVAQQLNAGMQVQGTVAGITDFGIFIELLPGVQGLAHISQI 504 Query: 397 SWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGV-KQLAEDP 440 + + + + G + +L +D ER RI+L + +L + P Sbjct: 505 PPD--QQPLKQAFSLGRRVQTTILSIDHERRRIALSLYTKLQQKP 547 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 51/190 (26%), Positives = 91/190 (47%), Gaps = 9/190 (4%) Query: 81 ETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRP 140 ET+LS +R + V G + ++ G +EL GI F+ +D R Sbjct: 363 ETVLSETYNERIRQRRQRLAGLTIGQIVNGSVLRVLRYGAVIELGGIEGFVHVGEIDWRW 422 Query: 141 VRDTLH--LEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGI 198 + D H G+E++ + +D++R +S R V + + + L GM+V+G Sbjct: 423 IGDARHALHPGQEIQAVITGIDEQRLRANLSMRRV----HPDPWLAVAQQLNAGMQVQGT 478 Query: 199 VKNLTDYGAFVD-LGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSL 257 V +TD+G F++ L GV GL HI+ + + + + ++G + +L D ER R++L Sbjct: 479 VAGITDFGIFIELLPGVQGLAHISQIPPDQ-QPLKQAFSLGRRVQTTILSIDHERRRIAL 537 Query: 258 GLK-QLGEDP 266 L +L + P Sbjct: 538 SLYTKLQQKP 547 Score = 75.8 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 1/91 (1%) Query: 445 VALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAK 504 +A G IV G V V GA +EL G+EG++ E + DA L G E++A Sbjct: 381 LAGLTIGQIVNGSVLRVLRYGAVIELG-GIEGFVHVGEIDWRWIGDARHALHPGQEIQAV 439 Query: 505 FTGVDRKNRAISLSVRAKDEADEKDAIATVN 535 TG+D + +LS+R +N Sbjct: 440 ITGIDEQRLRANLSMRRVHPDPWLAVAQQLN 470 Score = 68.4 bits (166), Expect = 6e-10, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 63/155 (40%), Gaps = 9/155 (5%) Query: 21 GSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK---NAQGELEIQVGDEVDVALDAVED 77 G IV G V+ + + +++ G E + + + G E+ + +++ Sbjct: 387 GQIVNGSVLRVLRYGAVIELGG-IEGFVHVGEIDWRWIGDARHALHPGQEIQAVITGIDE 445 Query: 78 GFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFLPGSLV 136 LS + + W+ + + V G + G G +EL G++ S + Sbjct: 446 QRLRANLSMRRV-HPDPWLAVAQQLNAGMQVQGTVAGITDFGIFIELLPGVQGLAHISQI 504 Query: 137 --DVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVS 169 D +P++ L G+ ++ ++ +D +R + +S Sbjct: 505 PPDQQPLKQAFSL-GRRVQTTILSIDHERRRIALS 538 >UniRef50_Q6B8Z9 30S ribosomal protein S1 n=1 Tax=Gracilaria tenuistipitata var. liui RepID=Q6B8Z9_GRATL Length = 265 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 53/265 (20%), Positives = 118/265 (44%), Gaps = 15/265 (5%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK----NAQ 57 + F + + PG I+ G V + LVD G+ +P ++ + Sbjct: 11 EKDFGAILNQY--SYNLHPGDIIAGTVFHKEAKGFLVDVGVNIAGYLPIDEVLLGSGYSN 68 Query: 58 GELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVK 117 +L V + + + A + LLS ++ +AW +++ + + + K Sbjct: 69 DDLMYLVNNTREFFIFAYNKERQQLLLSIKRLDYIKAWKRIKQLETEEIILHVPLINFNK 128 Query: 118 GGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESE 177 GG L G+ +F+P S + + + L K++ +D+K N +++S + + Sbjct: 129 GGILTALEGLHSFIPRSHLIL--FNAYESMVRSYLPCKILLVDEKTNKIILSHKLALLYL 186 Query: 178 NSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNV 237 S + L+ G V G + YG F+++ G+ LLHI+++ ++ + + + + Sbjct: 187 YS-------DLLRVGRLVYGQIIQFKQYGIFLNIYGIPALLHISEIGYEYIDNIDCVFAI 239 Query: 238 GDEITVKVLKFDRERTRVSLGLKQL 262 G +I VK++ D ++ R+S+ +++ Sbjct: 240 GHKIKVKIIHIDMKQARLSVSRREV 264 Score = 114 bits (286), Expect = 7e-24, Method: Composition-based stats. Identities = 52/253 (20%), Positives = 105/253 (41%), Gaps = 14/253 (5%) Query: 188 NLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEI-VNVGDEITVKV 245 NL G + G V + G VD+G + G L I ++ ++ V + + Sbjct: 24 NLHPGDIIAGTVFHKEAKGFLVDVGVNIAGYLPIDEVLLGSGYSNDDLMYLVNNTREFFI 83 Query: 246 LKFDRERTRVSLGLKQLG-EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLV 304 +++ER ++ L +K+L W I + E L + N G +E G+ + Sbjct: 84 FAYNKERQQLLLSIKRLDYIKAWKRIKQLETEEIILHVPLINFNKGGILTALE-GLHSFI 142 Query: 305 HVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKG 364 S + N + + +L +DE+ +I L K +++ G Sbjct: 143 PRSHLILFNAYESMVRSY-----LPCKILLVDEKTNKIILSHKLAL---LYLYSDLLRVG 194 Query: 365 DRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDA 424 V G+I +GIF+ + GI L+H+S+I + + + G +I ++ +D Sbjct: 195 RLVYGQIIQFKQYGIFLNI-YGIPALLHISEIGYEYI-DNIDCVFAIGHKIKVKIIHIDM 252 Query: 425 ERERISLGVKQLA 437 ++ R+S+ +++ Sbjct: 253 KQARLSVSRREVV 265 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 47/255 (18%), Positives = 103/255 (40%), Gaps = 11/255 (4%) Query: 269 AIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVV 328 + G + G V + G V++ + G + + E+ + + + V + Sbjct: 20 QYSYNLHPGDIIAGTVFHKEAKGFLVDVGVNIAGYLPIDEVLLGSGYSNDDLMYLVNNTR 79 Query: 329 EVMVLDIDEERRRISLGLKQCK-ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGI 387 E + ++ER+++ L +K+ W++ + + + + + GI L+ G+ Sbjct: 80 EFFIFAYNKERQQLLLSIKRLDYIKAWKRIKQLETEEIILHVPLINFNKGGILTALE-GL 138 Query: 388 DGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVAL 447 + S + A E VR Y + +L VD + +I L K + L Sbjct: 139 HSFIPRSHLILFNAYESMVRSY-----LPCKILLVDEKTNKIILSHKLAL---LYLYSDL 190 Query: 448 NKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTG 507 + G +V G++ G + + G+ L SE + +++ V ++G +++ K Sbjct: 191 LRVGRLVYGQIIQFKQYGIFLNIY-GIPALLHISEIGYEYIDNIDCVFAIGHKIKVKIIH 249 Query: 508 VDRKNRAISLSVRAK 522 +D K +S+S R Sbjct: 250 IDMKQARLSVSRREV 264 Score = 50.3 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 27/130 (20%), Positives = 50/130 (38%), Gaps = 7/130 (5%) Query: 47 AIPAEQFKNAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAE 106 IP + V + + V++ + +LS + A + L Sbjct: 141 FIPRSHLILFNAYESM-VRSYLPCKILLVDEKTNKIILSHKLALLYLYSDLLRV----GR 195 Query: 107 TVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTL--HLEGKELEFKVIKLDQKRN 164 V G I + G + + GI A L S + + + G +++ K+I +D K+ Sbjct: 196 LVYGQIIQFKQYGIFLNIYGIPALLHISEIGYEYIDNIDCVFAIGHKIKVKIIHIDMKQA 255 Query: 165 NVVVSRRAVI 174 + VSRR V+ Sbjct: 256 RLSVSRREVV 265 Score = 48.8 bits (115), Expect = 5e-04, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 37/91 (40%), Gaps = 1/91 (1%) Query: 449 KKGAIVTGKVTAVDAKGATVELADGVEGYLRASE-ASRDRVEDATLVLSVGDEVEAKFTG 507 G I+ G V +AKG V++ + GYL E + L+ V + E Sbjct: 26 HPGDIIAGTVFHKEAKGFLVDVGVNIAGYLPIDEVLLGSGYSNDDLMYLVNNTREFFIFA 85 Query: 508 VDRKNRAISLSVRAKDEADEKDAIATVNKQE 538 +++ + + LS++ D I + +E Sbjct: 86 YNKERQQLLLSIKRLDYIKAWKRIKQLETEE 116 >UniRef50_C6LB27 Putative S1 RNA binding domain protein n=2 Tax=Clostridiales RepID=C6LB27_9FIRM Length = 354 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 82/288 (28%), Positives = 146/288 (50%), Gaps = 8/288 (2%) Query: 4 SFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQG---EL 60 + SLK+I G ++ G V+ + V +D +E I E F + + Sbjct: 62 DYEAELNASLKQI--HEGDVLTGTVIGVSDTEVTLDLKYYTEGVIRVEDFTDDPNFNVKE 119 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 E+ +GDE+ + + G G+ +LSR++A AW L+ E + + G VK G Sbjct: 120 EVHIGDEISATVVRRDGGQGQIMLSRKEANDVLAWDRLKTLMEKQTIIKTKVAGVVKAGV 179 Query: 121 TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 V + GIR F+P S + + V + GKE+E +VI ++++ +++S R ++ + Sbjct: 180 VVYVEGIRGFVPASKLSLNYVENLEEWLGKEVELRVIDVNEEDKKLILSAREILREREAE 239 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGD 239 E+ + N++ G+ +G V++L YGAF++LG G+ GL+H++ ++ KR+K PS ++ V Sbjct: 240 EKKARISNVEVGLVTEGTVESLQPYGAFINLGNGLSGLVHVSQISEKRIKSPSAVLKV-- 297 Query: 240 EITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNL 287 VKV + ++SL +K L + I + E K TNL Sbjct: 298 GDKVKVKVIAVKDGKLSLSMKALQDVAAEEIQEETIELPKSEDVSTNL 345 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 60/288 (20%), Positives = 127/288 (44%), Gaps = 13/288 (4%) Query: 272 KRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVM 331 K+ EG LTG V ++D ++++ EG++ V + + N + + V++GD + Sbjct: 72 KQIHEGDVLTGTVIGVSDTEVTLDLKYYTEGVIRVEDFT-DDPNFNVKEEVHIGDEISAT 130 Query: 332 VLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLV 391 V+ D + +I L K+ +T + + + + GI G V Sbjct: 131 VVRRDGGQGQIMLSRKEANDVLAWDRLKTLMEKQTIIKTKVAGVVKAGVVVYVEGIRGFV 190 Query: 392 HLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQL----AEDPFNNWVAL 447 S +S N E + E+ G E+ V+ V+ E +++ L +++ + ++ Sbjct: 191 PASKLSLNYV--ENLEEW-LGKEVELRVIDVNEEDKKLILSAREILREREAEEKKARISN 247 Query: 448 NKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTG 507 + G + G V ++ GA + L +G+ G + S+ S R++ + VL V + K Sbjct: 248 VEVGLVTEGTVESLQPYGAFINLGNGLSGLVHVSQISEKRIKSPSAVLKV--GDKVKVKV 305 Query: 508 VDRKNRAISLSVRAKDE---ADEKDAIATVNKQEDANFSNNAMAEAFK 552 + K+ +SLS++A + + ++ + K ED + + ++ K Sbjct: 306 IAVKDGKLSLSMKALQDVAAEEIQEETIELPKSEDVSTNLGSLFAKLK 353 Score = 78.8 bits (193), Expect = 5e-13, Method: Composition-based stats. Identities = 44/227 (19%), Positives = 91/227 (40%), Gaps = 12/227 (5%) Query: 137 DVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVK 196 D G E+ V++ D + +++SR+ + L+E +K Sbjct: 112 DPNFNVKEEVHIGDEISATVVRRDGGQGQIMLSRKEANDVLAWDRLKTLMEKQT---IIK 168 Query: 197 GIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVS 256 V + G V + G+ G + + ++ V++ E + G E+ ++V+ + E ++ Sbjct: 169 TKVAGVVKAGVVVYVEGIRGFVPASKLSLNYVENLEEWL--GKEVELRVIDVNEEDKKLI 226 Query: 257 LG----LKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWT 312 L L++ + A G G V +L YG F+ + G+ GLVHVS++ Sbjct: 227 LSAREILREREAEEKKARISNVEVGLVTEGTVESLQPYGAFINLGNGLSGLVHVSQISEK 286 Query: 313 NKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAE 359 + + V ++ D ++SL +K + ++ E Sbjct: 287 RIKSPSAVLKVGDKVKVKVIAVKD---GKLSLSMKALQDVAAEEIQE 330 Score = 51.1 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 23/101 (22%), Positives = 44/101 (43%) Query: 438 EDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSV 497 E N + +G ++TG V V T++L EG +R + + D + + + Sbjct: 64 EAELNASLKQIHEGDVLTGTVIGVSDTEVTLDLKYYTEGVIRVEDFTDDPNFNVKEEVHI 123 Query: 498 GDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQE 538 GDE+ A D I LS + ++ D + T+ +++ Sbjct: 124 GDEISATVVRRDGGQGQIMLSRKEANDVLAWDRLKTLMEKQ 164 >UniRef50_Q10MB3 30S ribosomal protein S1, chloroplast, putative, expressed n=1 Tax=Oryza sativa Japonica Group RepID=Q10MB3_ORYSJ Length = 380 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 70/276 (25%), Positives = 115/276 (41%), Gaps = 38/276 (13%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK----NAQG 58 E E +I+T GS+++G V + VD KS + +P ++ N Sbjct: 74 EDLDSAVES--TDIDTDIGSLIKGTVFMTTSNGAYVDIQSKSTAFLPLDEACLLDVNHIE 131 Query: 59 ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 E I+ G + + G +LS + ++ AW + + VTG + G KG Sbjct: 132 EAGIRAGLVEEFMIIDENPGDETLILSLQAIQQDLAWERCRQLQAEDVVVTGKVIGGNKG 191 Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 G + G++ F+P S V + + L KEL K +++D+++ +V+S R + Sbjct: 192 GVVALVEGLKGFVPFSQVSSKSTAE--ELLDKELPLKFVEVDEEQGRLVLSNRKAMADSQ 249 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVG 238 + L G V G V++L YGAF+D+ ++ G Sbjct: 250 A--------QLGIGSVVLGTVESLKPYGAFIDI----------------------VLQPG 279 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRY 274 D + V +L DRER RVSL K+L P I Sbjct: 280 DTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPK 315 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 54/256 (21%), Positives = 98/256 (38%), Gaps = 37/256 (14%) Query: 188 NLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEI-VNVGDEITVKV 245 + G +KG V T GA+VD+ L + + V H E + G + Sbjct: 86 DTDIGSLIKGTVFMTTSNGAYVDIQSKSTAFLPLDEACLLDVNHIEEAGIRAGLVEEFMI 145 Query: 246 LKFDRERTRVSLGLKQLGED-PWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLV 304 + + + L L+ + +D W + E +TG+V G V + EG++G V Sbjct: 146 IDENPGDETLILSLQAIQQDLAWERCRQLQAEDVVVTGKVIGGNKGGV-VALVEGLKGFV 204 Query: 305 HVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKG 364 S++ + + + +++DEE+ R+ L ++ A+ G Sbjct: 205 PFSQVSSKSTAEELLD-----KELPLKFVEVDEEQGRLVLSNRKAMADSQA----QLGIG 255 Query: 365 DRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDA 424 V G ++S+ +G FI + + GD + ++L D Sbjct: 256 SVVLGTVESLKPYGAFIDI------------------------VLQPGDTLKVMILSHDR 291 Query: 425 ERERISLGVKQLAEDP 440 ER R+SL K+L P Sbjct: 292 ERGRVSLSTKKLEPTP 307 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 57/278 (20%), Positives = 107/278 (38%), Gaps = 38/278 (13%) Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDID 336 G+ + G V T G +V+I+ + + E + N + G V E M++D + Sbjct: 90 GSLIKGTVFMTTSNGAYVDIQSKSTAFLPLDEACLLDVNHIEEAGIRAGLVEEFMIIDEN 149 Query: 337 EERRRISLGLKQCKAN-PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSD 395 + L L+ + + W++ + + V GK+ G+ + L G+ G V S Sbjct: 150 PGDETLILSLQAIQQDLAWERCRQLQAEDVVVTGKVIGGNKGGV-VALVEGLKGFVPFSQ 208 Query: 396 ISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVT 455 +S EE + + E+ ++VD E+ R+ L ++ D A G++V Sbjct: 209 VSSKSTAEELLDK-----ELPLKFVEVDEEQGRLVLSNRKAMAD----SQAQLGIGSVVL 259 Query: 456 GKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAI 515 G V ++ GA +++ VL GD ++ DR+ + Sbjct: 260 GTVESLKPYGAFIDI-----------------------VLQPGDTLKVMILSHDRERGRV 296 Query: 516 SLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKA 553 SLS + + E A + MA+ F+ Sbjct: 297 SLSTKKLEPTPGDMIRNPKLVFEKA----DEMAQIFRQ 330 Score = 94.6 bits (234), Expect = 8e-18, Method: Composition-based stats. Identities = 58/276 (21%), Positives = 109/276 (39%), Gaps = 39/276 (14%) Query: 84 LSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL-NGIRAFLPGS---LVDVR 139 +S A + + + + G + G V++ + AFLP L+DV Sbjct: 69 VSFSPEDLDSAVESTDIDTDIGSLIKGTVFMTTSNGAYVDIQSKSTAFLPLDEACLLDVN 128 Query: 140 PVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIV 199 + + G EF +I + +++S +A+ + QL E + V G V Sbjct: 129 HIEEAGIRAGLVEEFMIIDENPGDETLILSLQAIQQDLAWERCRQLQA---EDVVVTGKV 185 Query: 200 KNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGL 259 G + G+ G + + ++ K E+++ E+ +K ++ D E+ R+ L Sbjct: 186 IGGNKGGVVALVEGLKGFVPFSQVSSKSTA--EELLDK--ELPLKFVEVDEEQGRLVLSN 241 Query: 260 KQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPS 319 ++ D + G+ + G V +L YG F++I Sbjct: 242 RKAMADSQAQLG----IGSVVLGTVESLKPYGAFIDI----------------------- 274 Query: 320 KVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQ 355 V+ GD ++VM+L D ER R+SL K+ + P Sbjct: 275 -VLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGD 309 Score = 69.2 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 66/169 (39%), Gaps = 6/169 (3%) Query: 362 NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQ 421 + G ++G + T G ++ + + L + + G +++ Sbjct: 88 DIGSLIKGTVFMTTSNGAYVDIQSKSTAFLPLDEACLLDVNHIEEAGIRAGLVEEFMIID 147 Query: 422 VDAERERISLGVKQLAED-PFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRA 480 + E + L ++ + +D + L + +VTGKV KG V L +G++G++ Sbjct: 148 ENPGDETLILSLQAIQQDLAWERCRQLQAEDVVVTGKVIG-GNKGGVVALVEGLKGFVPF 206 Query: 481 SEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKD 529 S+ S A +L E+ KF VD + + LS R + Sbjct: 207 SQVSSK--STAEELLDK--ELPLKFVEVDEEQGRLVLSNRKAMADSQAQ 251 Score = 43.4 bits (101), Expect = 0.023, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 46/138 (33%), Gaps = 10/138 (7%) Query: 410 KKGDEIAAVVLQVDAERER--------ISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAV 461 K+ E + D ER +S + L + + G+++ G V Sbjct: 42 KEERERERMCQLFDEASERCRTAPMEGVSFSPEDL-DSAVESTDIDTDIGSLIKGTVFMT 100 Query: 462 DAKGATVELADGVEGYLRASEASRDRVEDATLV-LSVGDEVEAKFTGVDRKNRAISLSVR 520 + GA V++ +L EA V + G E + + + LS++ Sbjct: 101 TSNGAYVDIQSKSTAFLPLDEACLLDVNHIEEAGIRAGLVEEFMIIDENPGDETLILSLQ 160 Query: 521 AKDEADEKDAIATVNKQE 538 A + + + ++ Sbjct: 161 AIQQDLAWERCRQLQAED 178 >UniRef50_C4R3F9 RNA binding protein with preference for single stranded tracts of U's involved in synthesis of both n=1 Tax=Pichia pastoris GS115 RepID=C4R3F9_PICPG Length = 1694 Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats. Identities = 100/565 (17%), Positives = 202/565 (35%), Gaps = 49/565 (8%) Query: 9 FEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQ---VG 65 S +E+ G IV G V I + ++ + + + Sbjct: 767 LPASFEELPA-VGEIVYGYVHTITNAGLFIEFADGLSGFARTKDITDEPSDKLPSLYFKN 825 Query: 66 DEVDVALDAVEDGFGETLLSREKAKRH--EAWITLEKAYED------AETVTGVINGKVK 117 V + ++D F + L+ + A ++K+ + + I Sbjct: 826 QSVRARILKLDDEFRKFRLTLKDIDHQIVAATNPVDKSITNLNEFVPGKITKAKIKSVTP 885 Query: 118 GGFTVEL-NGIRAFLPGSLV--DVRPVRDTLHLE-----GKELEFKVIKL---------- 159 TVEL + S V + ++DT G EL+ KVI Sbjct: 886 TQLTVELAENQLGRIDVSQVFDSLLEIKDTKKPLSSFKEGAELKVKVIGYQNKDSSFTSV 945 Query: 160 ---DQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVD 215 D V +S + E L + G + G V +V + Sbjct: 946 AFRDWGDILVELSIKKSELEEEGKVNVLSLTQITPGTKWLGFVTRYARGFWWVSVSPKFR 1005 Query: 216 GLLHITDMAW-KRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRY 274 L + D++ V+ + +G I V + + ++ ++ + Sbjct: 1006 TKLSLMDLSKSGSVEELEKAYPLGSAIEVTAKQIIGNK-----AVEVFSKENRIETINDV 1060 Query: 275 PEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLD 334 G KL R+ +L+ VE+ + V+ ++E + + + D+ VL Sbjct: 1061 KVGDKLPCRIISLSHDYVTVELSDKVKAKSFITE-ALDDYSESLESTFSTNDICTATVLS 1119 Query: 335 IDEERRRISLGLK-QCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHL 393 +D+ R+I + L+ + + + E +GD V G I I++FG+++ L + LV + Sbjct: 1120 VDDTTRQIFVSLRSENAKDKLIESFEDVKRGDIVRGFITRISNFGVYVSLGRTVFALVRV 1179 Query: 394 SDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWV---ALNKK 450 +DIS ++ + + K + ++ E RI + +K+ + K Sbjct: 1180 TDIS-DLFLTDWKKHVKLNQFVTGKIVDA-GEERRILMTLKESQVGQGTGALHQFDDLKV 1237 Query: 451 GAIVTGKVTAVDAKGATVELAD--GVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGV 508 G + G + + G + L V+G S+ S ++E+ + + GD V+ K + Sbjct: 1238 GDVYEGTIKKIMDFGVFITLDGVHSVDGLCHRSQISDSKIENFESLFNQGDRVKVKILDI 1297 Query: 509 DRKNRAISLSVRAKDEADEKDAIAT 533 +R + +SL ++A A+ D Sbjct: 1298 NRNKKQLSLGMKASYFANRDDEEEA 1322 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 86/531 (16%), Positives = 181/531 (34%), Gaps = 33/531 (6%) Query: 20 PGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQGELEIQVGDEVDVALDAVE 76 PG +V ++ I ++ + IP K + ++G + + V Sbjct: 326 PGVMVNAHILDITEEGIFCRVLGLLPGRIPLAHLKLFNVPEIRETYKIGSTIKSRVVGVL 385 Query: 77 DGFGE--TLLSREKAKRHEAWITLEKAYED---AETVT-GVINGKVKGGFTVELN-GIRA 129 + G LS + E E T I GK +ELN Sbjct: 386 EYEGSKSLTLSTIPSILELDSTYDESPLESFPFGFTFESVKIVGKDSNNVYLELNEDTYG 445 Query: 130 FLPGSLVDVRPVRDTLHLEGKEL-EFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLEN 188 + S ++ D+ + G + +VI V++ ++ + +++ Sbjct: 446 QVHLSKLNKEVSIDSFYKVGSTHHKARVIGYSPVDKVFVLT----MDPRQLEAKFLNIQD 501 Query: 189 LQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLK 247 + G V G+V + +G + + + + M+ + +P +G ++ +VLK Sbjct: 502 IPIGEIVTGVVTKVHSHGLNIKIFDQFEAQVPYGHMSDVMLTYPEMKFKIGTKVKGRVLK 561 Query: 248 FDRERTRVSL--GLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVH 305 F R V+L L + D + + + V G + + G + Sbjct: 562 FYRGNLCVTLKKSLLRSERDELIFTYEDVVPNKRTFATVEKFFPTGVLMSFFNNISGFLP 621 Query: 306 VSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGL---KQCKANPWQQFAETHN 362 +E+ N P + + + V + ID + + K ++ + Sbjct: 622 KTEISEAYVN-RPEDHLKLFQTISVRIDSIDPATNKFRVSCLLSKDLSEEQEKKISTFIP 680 Query: 363 KGDRVEGKIKSITDFGIFIGL-DGGIDGLVHLSDISWNVAGEE--AVREYKKGDEIAAVV 419 +E I + + + D + G++ +S + +R G + A+ Sbjct: 681 GSSILEVYIVEKMKDAMIVEVKDSNVRGVIQEGQLSDGDQNQNKTLLRTAVVGSSLEALF 740 Query: 420 LQVDAERERISLGVKQLA-------EDPFNNWVALNKKGAIVTGKVTAVDAKGATVELAD 472 L D + I+ K + P ++ L G IV G V + G +E AD Sbjct: 741 LHRDPKSRTINFTAKDSLIRASKSGQLP-ASFEELPAVGEIVYGYVHTITNAGLFIEFAD 799 Query: 473 GVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKD 523 G+ G+ R + + + + + V A+ +D + R L+++ D Sbjct: 800 GLSGFARTKDITDEPSDKLPSLYFKNQSVRARILKLDDEFRKFRLTLKDID 850 Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 98/631 (15%), Positives = 206/631 (32%), Gaps = 93/631 (14%) Query: 7 QLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA---QGELEIQ 63 QL + L + G IV GVV + + + + E+ +P + E++ + Sbjct: 491 QLEAKFLNIQDIPIGEIVTGVVTKVHSHGLNIKIFDQFEAQVPYGHMSDVMLTYPEMKFK 550 Query: 64 VGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYED---AETVTGVINGKVKGGF 120 +G +V + G ++ +K+ L YED + + G Sbjct: 551 IGTKVKGRVLKF--YRGNLCVTLKKSLLRSERDELIFTYEDVVPNKRTFATVEKFFPTGV 608 Query: 121 TVE-LNGIRAFLPGSLVDVRPVRDTLHLEG--KELEFKVIKLDQKRNNVVVSRRAVIESE 177 + N I FLP + + V + + ++ +D N VS ++ + Sbjct: 609 LMSFFNNISGFLPKTEISEAYVNRPEDHLKLFQTISVRIDSIDPATNKFRVSC--LLSKD 666 Query: 178 NSAERDQLLENLQEG-MEVKGIVKNLTDYGAFVDL--GGVDGLLHITDMAWKRVKHPSEI 234 S E+++ + G ++ + V++ V G++ ++ + Sbjct: 667 LSEEQEKKISTFIPGSSILEVYIVEKMKDAMIVEVKDSNVRGVIQEGQLSDGDQNQNKTL 726 Query: 235 VN---VGDEITVKVLKFDRERTRVSLGLKQLGEDPWV------AIAKRYPEGTKLTGRVT 285 + VG + L D + ++ K + + G + G V Sbjct: 727 LRTAVVGSSLEALFLHRDPKSRTINFTAKDSLIRASKSGQLPASFEELPAVGEIVYGYVH 786 Query: 286 NLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLG 345 +T+ G F+E +G+ G ++ + PS V +L +D+E R+ L Sbjct: 787 TITNAGLFIEFADGLSGFARTKDITDEPSDKLPSLYFK-NQSVRARILKLDDEFRKFRLT 845 Query: 346 LKQCK---------ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDI 396 LK + G + KIKS+T + + L G + +S + Sbjct: 846 LKDIDHQIVAATNPVDKSITNLNEFVPGKITKAKIKSVTPTQLTVELAENQLGRIDVSQV 905 Query: 397 SWN----VAGEEAVREYKKGDEIAAVVLQV-------------DAERERISLGVKQLAED 439 + ++ + +K+G E+ V+ D + L +K+ + Sbjct: 906 FDSLLEIKDTKKPLSSFKEGAELKVKVIGYQNKDSSFTSVAFRDWGDILVELSIKKSELE 965 Query: 440 PFNNW----VALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASR---------- 485 + G G VT V ++ L + S+ Sbjct: 966 EEGKVNVLSLTQITPGTKWLGFVTRYARGFWWVSVSPKFRTKLSLMDLSKSGSVEELEKA 1025 Query: 486 --------------------------DRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSV 519 +R+E V VGD++ + + + LS Sbjct: 1026 YPLGSAIEVTAKQIIGNKAVEVFSKENRIETINDV-KVGDKLPCRIISLSHDYVTVELSD 1084 Query: 520 RAKDEADEKDAIATVNKQEDANFSNNAMAEA 550 + K ++ +A+ ++ ++ FS N + A Sbjct: 1085 KVKAKSFITEALDDYSESLESTFSTNDICTA 1115 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 88/535 (16%), Positives = 188/535 (35%), Gaps = 29/535 (5%) Query: 10 EESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE--IQVGDE 67 L++ + PG +++ V ++ +VD G K I ++ FKN+ ++E ++ G Sbjct: 226 NAHLEDDDLVPGGVLQVAVNSVQDHGCIVDTGKKIPGFIFSKSFKNSGIDMETDLKPGFV 285 Query: 68 VDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGV-----INGKVKGGFTV 122 + + + L+ + TL A + GV I + G Sbjct: 286 LLATISKSNNKN-TITLTLPSMNNKDNGSTLSTATSVDAVLPGVMVNAHILDITEEGIFC 344 Query: 123 ELNG-IRAFLPGSLVDVRPVRDTLHL--EGKELEFKVIKL--DQKRNNVVVSRRAVIESE 177 + G + +P + + + V + G ++ +V+ + + ++ +S I Sbjct: 345 RVLGLLPGRIPLAHLKLFNVPEIRETYKIGSTIKSRVVGVLEYEGSKSLTLSTIPSILEL 404 Query: 178 NSAERDQLLENLQEGMEVKGI-VKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIV 235 +S + LE+ G + + + +++L G +H++ + + Sbjct: 405 DSTYDESPLESFPFGFTFESVKIVGKDSNNVYLELNEDTYGQVHLSKL--NKEVSIDSFY 462 Query: 236 NVGDE-ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFV 294 VG +V+ + L + + + P G +TG VT + +G + Sbjct: 463 KVGSTHHKARVIGYSPVDKVFVLTMDPRQLEAKFLNIQDIPIGEIVTGVVTKVHSHGLNI 522 Query: 295 EIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISL--GLKQCKAN 352 +I + E V M +P +G V+ VL ++L L + + + Sbjct: 523 KIFDQFEAQVPYGHMSDVM-LTYPEMKFKIGTKVKGRVLKFYRGNLCVTLKKSLLRSERD 581 Query: 353 PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKG 412 E R ++ G+ + I G + ++IS K Sbjct: 582 ELIFTYEDVVPNKRTFATVEKFFPTGVLMSFFNNISGFLPKTEISEAYVN-RPEDHLKLF 640 Query: 413 DEIAAVVLQVDAERERISLGV---KQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVE 469 I+ + +D + + K L+E+ +I+ + VE Sbjct: 641 QTISVRIDSIDPATNKFRVSCLLSKDLSEEQEKKISTFIPGSSILEVYIVEKMKDAMIVE 700 Query: 470 LAD-GVEGYLRASEASRDRVEDATLVLS---VGDEVEAKFTGVDRKNRAISLSVR 520 + D V G ++ + S +L VG +EA F D K+R I+ + + Sbjct: 701 VKDSNVRGVIQEGQLSDGDQNQNKTLLRTAVVGSSLEALFLHRDPKSRTINFTAK 755 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 85/569 (14%), Positives = 178/569 (31%), Gaps = 58/569 (10%) Query: 12 SLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIP---------------------- 49 S+ PGS+V G V++I K + + +P Sbjct: 113 SMTLKNLIPGSVVLGQVISIQKLGMQLGLPGNIRGYVPITSVSKQITQQLEALEQDSDDE 172 Query: 50 -------AEQFKNAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAY 102 + + Q+G + + E + K + + Sbjct: 173 DASSSPQLSEKVFPELSKIFQLGQWLRAVVLEESSVPSEH---KHKIQLSVEPEKVNAHL 229 Query: 103 EDAETVTG-----VINGKVKGGFTVELNG-IRAFL-PGSLVDVRPVRDTLHLEGKELEFK 155 ED + V G +N G V+ I F+ S + +T G L Sbjct: 230 EDDDLVPGGVLQVAVNSVQDHGCIVDTGKKIPGFIFSKSFKNSGIDMETDLKPGFVLLAT 289 Query: 156 VIKLDQKRNN-VVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV 214 + K + K + + ++ ++ ++ + G+ V + ++T+ G F + G+ Sbjct: 290 ISKSNNKNTITLTLPSMNNKDNGSTLSTATSVDAVLPGVMVNAHILDITEEGIFCRVLGL 349 Query: 215 -DGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSL------GLKQLGEDPW 267 G + + + V E +G I +V+ SL + +L Sbjct: 350 LPGRIPLAHLKLFNVPEIRETYKIGSTIKSRVVGVLEYEGSKSLTLSTIPSILELDSTYD 409 Query: 268 VAIAKRYPEGTKLTG-RVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGD 326 + + +P G ++ ++E+ E G VH+S++ NK + VG Sbjct: 410 ESPLESFPFGFTFESVKIVGKDSNNVYLELNEDTYGQVHLSKL---NKEVSIDSFYKVGS 466 Query: 327 VV-EVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDG 385 + V+ + L + + + G+ V G + + G+ I + Sbjct: 467 THHKARVIGYSPVDKVFVLTMDPRQLEAKFLNIQDIPIGEIVTGVVTKVHSHGLNIKIFD 526 Query: 386 GIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISL--GVKQLAEDPFNN 443 + V +S +V ++K G ++ VL+ ++L + + D Sbjct: 527 QFEAQVPYGHMS-DVMLTYPEMKFKIGTKVKGRVLKFYRGNLCVTLKKSLLRSERDELIF 585 Query: 444 WVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEA 503 V G + + + G+L +E S V L + + Sbjct: 586 TYEDVVPNKRTFATVEKFFPTGVLMSFFNNISGFLPKTEISEAYVNRPEDHLKLFQTISV 645 Query: 504 KFTGVDRKNRAISLSV---RAKDEADEKD 529 + +D +S + E EK Sbjct: 646 RIDSIDPATNKFRVSCLLSKDLSEEQEKK 674 Score = 64.2 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 26/192 (13%), Positives = 71/192 (36%), Gaps = 13/192 (6%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQG 58 +E+ ES + + + G IVRG + I V V G + + + Sbjct: 1133 SENAKDKLIESFE--DVKRGDIVRGFITRISNFGVYVSLGRTVFALVRVTDISDLFLTDW 1190 Query: 59 ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEK--AYEDAETVTGVINGKV 116 + +++ V + L++ ++++ + L + + + G I + Sbjct: 1191 KKHVKLNQFVTGKIVDA-GEERRILMTLKESQVGQGTGALHQFDDLKVGDVYEGTIKKIM 1249 Query: 117 KGGFTVELNG---IRAFLPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRR 171 G + L+G + S + + + L +G ++ K++ +++ + + + + Sbjct: 1250 DFGVFITLDGVHSVDGLCHRSQISDSKIENFESLFNQGDRVKVKILDINRNKKQLSLGMK 1309 Query: 172 AVIESENSAERD 183 A + E + Sbjct: 1310 ASYFANRDDEEE 1321 Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats. Identities = 41/222 (18%), Positives = 81/222 (36%), Gaps = 34/222 (15%) Query: 359 ETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAG---------------- 402 + G V G++ SI G+ +GL G I G V ++ +S + Sbjct: 117 KNLIPGSVVLGQVISIQKLGMQLGLPGNIRGYVPITSVSKQITQQLEALEQDSDDEDASS 176 Query: 403 ---------EEAVREYKKGDEIAAVVLQV----DAERERISLGVKQLAEDPFNNWVALNK 449 E + ++ G + AVVL+ + +I L V+ + Sbjct: 177 SPQLSEKVFPELSKIFQLGQWLRAVVLEESSVPSEHKHKIQLSVEPEKVNAHLED-DDLV 235 Query: 450 KGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVD 509 G ++ V +V G V+ + G++ S++ ++ D L G + A + + Sbjct: 236 PGGVLQVAVNSVQDHGCIVDTGKKIPGFI-FSKSFKNSGIDMETDLKPGFVLLATISKSN 294 Query: 510 RKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAF 551 KN I+L++ + + D ++T + M A Sbjct: 295 NKN-TITLTLPSMNNKDNGSTLSTATSVDA--VLPGVMVNAH 333 >UniRef50_Q4PGT5 Putative uncharacterized protein n=1 Tax=Ustilago maydis RepID=Q4PGT5_USTMA Length = 1563 Score = 175 bits (443), Expect = 5e-42, Method: Composition-based stats. Identities = 88/548 (16%), Positives = 198/548 (36%), Gaps = 57/548 (10%) Query: 25 RGVVVAID-KDVVLVDAGLKSESAIPAEQFKNAQ---GELEIQVGDEVDVALDAVEDGFG 80 ++ + + + + + + + F + + E + G V + V+ Sbjct: 591 TANIIKLGLPNAIFLQLQGHVDGVVFSNHFADVKLTQPEKRYKPGLSVKARVMDVDPNRN 650 Query: 81 ETLLSREKAKRHEAWITLEKAYEDAETV--TGVINGKVKGGFTVE-LNGIRAFLPGSLVD 137 +L+ +K+ + + V + V G++A +PG V Sbjct: 651 RIVLTLKKSLVKSDLPIVASMQDARIGVVTNATVFRVQTNSLIVSLFGGLKALVPGREVS 710 Query: 138 VRPVRDTLH--LEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEV 195 D EGK ++ ++ ++D + VV S + + + ++ ++ G +V Sbjct: 711 ENDFNDVKSSFTEGKVIKIRITEVDYENQKVVGSIKQTLPEYLAKLN---VDAVEVGDKV 767 Query: 196 KGIVKNLTDYGAFVDL--GGVDGLLHITDMAWKR---VKHPSEIVNVGDEIT-VKVLKFD 249 G V + + L GV LL ++ +A R + E + EI + V + Sbjct: 768 TGKVAAVHKEVVVLTLVPTGVRALLSLSVLASMRNTTSQELLESLEEDQEIEDLVVSAKN 827 Query: 250 RERTRVSL-----GLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDY--GCFVEIEEGVEG 302 + V + K + + + + +G + GRV D C V + Sbjct: 828 PAKGIVIVADKVRSSKSEDVENNGSTSGQVKQGNVVQGRVIQKNDKYLDCVVALGTATRA 887 Query: 303 LVHVSEM-DWTNKNIHPSKVVNVGDVVEVMVLDIDEERR---------RISLGLKQCKAN 352 +HV+++ D ++N+ + + G ++ ++ + + R++ + Sbjct: 888 TLHVTDLADDFSRNVS---LPSPGQTLQCYIVSLKSNGKSAVISTRPSRVAASDSAEVTD 944 Query: 353 PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKG 412 P KG +V G +K+IT+ G+F+ + +D V + ++ + + G Sbjct: 945 PEISSISDLAKGQKVRGFVKAITNVGLFVTVGRKLDARVQVRELFDEFVRD-WKTRFTVG 1003 Query: 413 DEIAAVVLQVDAERERISLGVKQ-----------------LAEDPFNNWVALNKKGAIVT 455 ++ ++ + I + +K L +A K G V Sbjct: 1004 QVVSGTIMDTNVHNNEIEMSLKSTPGSIKPRAERAEERALLDAKKRPKRLADFKVGDKVK 1063 Query: 456 GKVTAVDAKGATVELAD-GVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRA 514 G V + G V++ V G +E S + ++A VGD+V A ++ + + Sbjct: 1064 GFVKNIIGFGVFVQIEGTNVSGLAHMNELSDGKADEALKAFRVGDKVRAIVLRINEEKKK 1123 Query: 515 ISLSVRAK 522 IS ++ Sbjct: 1124 ISFGLKPS 1131 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 92/457 (20%), Positives = 167/457 (36%), Gaps = 43/457 (9%) Query: 105 AETVTGVINGKVKGGFTVE--LNGIRAFLPGSLVDVRPVRDTLHLEGKELEF------KV 156 +++ I+ G+ ++ + R F+ S V P GK LE K+ Sbjct: 294 GASLSATISSVEDHGYMLDSGIPEFRGFVGFSDVARLPASFHAGKNGKSLEVGSVVFAKI 353 Query: 157 IKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV-D 215 K+ + + + + S + + + + G K +V G V L G+ D Sbjct: 354 TKIPESKRSFEATLDPKTVSTSPIKHTPSITAILPGTLTKVLVTAALPTGLNVKLFGMFD 413 Query: 216 GLL---HITDMAWKRVKHPSEIVNVGDEITVKVL-------------KFDRERTRVSLGL 259 + H+ ++ K S++ G + +VL ++ L L Sbjct: 414 ATIDRFHLPELPQG--KDISDVYKEGSKHVARVLWDLLSPPSTALQSDIPEHERKLGLSL 471 Query: 260 KQ---LGEDPWVA----IAKRYPEGTKLTGRVTN-LTDYGCFVEIEE-GVEGLVHVSEMD 310 E P + YP G L V + D+G V + + + G VH+S++ Sbjct: 472 APQVLALEAPVAKDQQLLQHAYPIGAILKVTVVQTINDWGLVVSVHDTDLRGFVHISQVS 531 Query: 311 WTNKNIHP--SKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVE 368 + P S V + V+ R + L LK G+ V Sbjct: 532 DDHVVSLPPSSGPFAKETVHKARVVGHSPTDRTLQLSLKASVLERKFMRVSEVEVGEVVT 591 Query: 369 GKIKSI-TDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERE 427 I + IF+ L G +DG+V S+ +V + + YK G + A V+ VD R Sbjct: 592 ANIIKLGLPNAIFLQLQGHVDGVV-FSNHFADVKLTQPEKRYKPGLSVKARVMDVDPNRN 650 Query: 428 RISLGVKQL---AEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEAS 484 RI L +K+ ++ P + + G + V V V L G++ + E S Sbjct: 651 RIVLTLKKSLVKSDLPIVASMQDARIGVVTNATVFRVQTNSLIVSLFGGLKALVPGREVS 710 Query: 485 RDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRA 521 + D + G ++ + T VD +N+ + S++ Sbjct: 711 ENDFNDVKSSFTEGKVIKIRITEVDYENQKVVGSIKQ 747 Score = 148 bits (374), Expect = 5e-34, Method: Composition-based stats. Identities = 96/538 (17%), Positives = 188/538 (34%), Gaps = 50/538 (9%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVD---------AGLKSESAIPAEQFKNAQGELEIQVGDE 67 + G+ + + +++ ++D G + +PA G+ ++VG Sbjct: 290 DLDVGASLSATISSVEDHGYMLDSGIPEFRGFVGFSDVARLPASFHAGKNGK-SLEVGSV 348 Query: 68 VDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYED---AETVTGVINGKVKGGFTVEL 124 V + + + + + + I + ++ + G V+L Sbjct: 349 VFAKITKIPESKRSFEATLDPKTVSTSPIKHTPSITAILPGTLTKVLVTAALPTGLNVKL 408 Query: 125 NGI------RAFLP--------------GSLVDVRPVRDTLHLEGKELEFKVIKLDQKRN 164 G+ R LP GS R + D L L+ + + ++K Sbjct: 409 FGMFDATIDRFHLPELPQGKDISDVYKEGSKHVARVLWDLLSPPSTALQSDIPEHERKLG 468 Query: 165 NVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVK-NLTDYGAFVDLGGVD--GLLHIT 221 + + +E+ + ++ L G +K V + D+G V + D G +HI+ Sbjct: 469 LSLAPQVLALEAPVAKDQQLLQHAYPIGAILKVTVVQTINDWGLVVSVHDTDLRGFVHIS 528 Query: 222 DMAWKRVKHP---SEIVNVGDEITVKVLKFDRERTRVSLGLKQ-LGEDPWVAIAKRYPEG 277 ++ V S +V+ + L LK + E ++ +++ Sbjct: 529 QVSDDHVVSLPPSSGPFAKETVHKARVVGHSPTDRTLQLSLKASVLERKFMRVSEVEVGE 588 Query: 278 TKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDE 337 + F++++ V+G+V S K P K G V+ V+D+D Sbjct: 589 VVTANIIKLGLPNAIFLQLQGHVDGVV-FSNHFADVKLTQPEKRYKPGLSVKARVMDVDP 647 Query: 338 ERRRISLGLKQCKAN---PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLS 394 R RI L LK+ P + G + + + + L GG+ LV Sbjct: 648 NRNRIVLTLKKSLVKSDLPIVASMQDARIGVVTNATVFRVQTNSLIVSLFGGLKALVPGR 707 Query: 395 DISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNW-VALNKKGAI 453 ++S N + + +G I + +VD E +++ +KQ + V + G Sbjct: 708 EVSENDFND-VKSSFTEGKVIKIRITEVDYENQKVVGSIKQTLPEYLAKLNVDAVEVGDK 766 Query: 454 VTGKVTAVDAKGATVELAD-GVEGYLRASEASRDRV---EDATLVLSVGDEVEAKFTG 507 VTGKV AV + + L GV L S + R ++ L E+E Sbjct: 767 VTGKVAAVHKEVVVLTLVPTGVRALLSLSVLASMRNTTSQELLESLEEDQEIEDLVVS 824 Score = 138 bits (347), Expect = 7e-31, Method: Composition-based stats. Identities = 87/570 (15%), Positives = 199/570 (34%), Gaps = 43/570 (7%) Query: 10 EESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSE--SAIPAEQFKNAQGE-LEIQVG- 65 ++ L + G+I++ VV D LV + ++ + Q + L G Sbjct: 485 DQQLLQHAYPIGAILKVTVVQTINDWGLVVSVHDTDLRGFVHISQVSDDHVVSLPPSSGP 544 Query: 66 ---DEV-DVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 + V + LS + + ++ + + +I + Sbjct: 545 FAKETVHKARVVGHSPTDRTLQLSLKASVLERKFMRVSEVEVGEVVTANIIKLGLPNAIF 604 Query: 122 VELNG-IRAFL-PGSLVDVRPVRDTLHLE-GKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 ++L G + + DV+ + + G ++ +V+ +D RN +V++ + + ++ Sbjct: 605 LQLQGHVDGVVFSNHFADVKLTQPEKRYKPGLSVKARVMDVDPNRNRIVLTLKKSL-VKS 663 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNV 237 +++ + G+ V + V L GG+ L+ +++ Sbjct: 664 DLPIVASMQDARIGVVTNATVFRVQTNSLIVSLFGGLKALVPGREVSENDFNDVKSSFTE 723 Query: 238 GDEITVKVLKFDRERTRVSLGLKQLGEDPWVAI-AKRYPEGTKLTGRVTNLTDYGCFVEI 296 G I +++ + D E +V +KQ + + G K+TG+V + + + Sbjct: 724 GKVIKIRITEVDYENQKVVGSIKQTLPEYLAKLNVDAVEVGDKVTGKVAAVHKEVVVLTL 783 Query: 297 EE-GVEGLVHVSEMDWTNKNIHPS--KVVNVGDVVEVMVLDIDEERRRISL------GLK 347 GV L+ +S + + + +E +V+ + I + K Sbjct: 784 VPTGVRALLSLSVLASMRNTTSQELLESLEEDQEIEDLVVSAKNPAKGIVIVADKVRSSK 843 Query: 348 QCKANPWQQFAETHNKGDRVEGKIKSITDFGI--FIGLDGGIDGLVHLSDISWNVAGEEA 405 + +G+ V+G++ D + + L +H++D++ + Sbjct: 844 SEDVENNGSTSGQVKQGNVVQGRVIQKNDKYLDCVVALGTATRATLHVTDLADDF--SRN 901 Query: 406 VREYKKGDEIAAVVLQ---------VDAERERISLGVKQLAEDPFNNWVALNKKGAIVTG 456 V G + ++ + R++ DP + ++ KG V G Sbjct: 902 VSLPSPGQTLQCYIVSLKSNGKSAVISTRPSRVAASDSAEVTDPEISSISDLAKGQKVRG 961 Query: 457 KVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAI- 515 V A+ G V + ++ ++ E + V D +VG V + N I Sbjct: 962 FVKAITNVGLFVTVGRKLDARVQVRELFDEFVRDWKTRFTVGQVVSGTIMDTNVHNNEIE 1021 Query: 516 -SL-----SVRAKDEADEKDAIATVNKQED 539 SL S++ + E E+ A+ K+ Sbjct: 1022 MSLKSTPGSIKPRAERAEERALLDAKKRPK 1051 >UniRef50_D1IA06 Whole genome shotgun sequence of line PN40024, scaffold_7.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1IA06_VITVI Length = 1862 Score = 175 bits (443), Expect = 5e-42, Method: Composition-based stats. Identities = 91/529 (17%), Positives = 189/529 (35%), Gaps = 42/529 (7%) Query: 20 PGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQ----FKNAQGELEIQVGDEVDVALDAV 75 PG +V V + ++ V++ + F ++ + + +V+ + + Sbjct: 316 PGMMVNARVQSTFENGVMLSFLTYFTGTVDIFHLQTTFPSSNWKDDYNQNKKVNARILFI 375 Query: 76 EDGFGETLLSREKAKRHEAWITLEKAYEDAETVT-GVINGKVKG-GFTVELNGIRA---- 129 + L+ + + + + +G G +E+ A Sbjct: 376 DPSTRAVGLTLNPHLVNNKAPPCPV--KTGDIYDHSKVIRVDRGLGLLLEVPSTPASTPT 433 Query: 130 FLPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLE 187 ++ V VR EG + +++ + + +A + Sbjct: 434 YVTLFDVADEEVRKMEKKYKEGSHVRVRILGFRNLEGLAMGTLKASAFEGSVFTH----S 489 Query: 188 NLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVL 246 +++ GM VK V + +GA V GV L + M+ + P + VG E+ +VL Sbjct: 490 DVKPGMVVKAKVIAVDSFGAIVQFPSGVKALCPLRHMSEFDIVKPRKKFKVGAELIFRVL 549 Query: 247 KFDRERTRVSLGLKQLGEDPWVAIAKRYP---EGTKLTGRVTNLTDYGCFVEIEEGVEGL 303 + R+++ K+ + I Y EG G +T + +GCF+ GV+G Sbjct: 550 GC--KSKRITVTHKKTLLKSKLGIISSYTDATEGLITHGWITKIEKHGCFIRFYNGVQGF 607 Query: 304 VHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLG--LKQCKANPWQQFAETH 361 SE+ + S + +VG VV+ V RRI+L +K + + Sbjct: 608 APSSELGLE-PGCNTSLMYHVGQVVKCRVKGSVPASRRINLSFIIKPTR----ISEDDMV 662 Query: 362 NKGDRVEGKIKSITDFGIFIGLD--GGIDGLVHLSDISWNVAGEEAVRE-YKKGDEIAAV 418 G V G + +T I + + G + G + ++ + ++ K G E Sbjct: 663 KLGSVVGGVVDRVTPHAIIVNVSAKGYLKGTISTEHLADHQGHAALMKSTLKPGYEFD-Q 721 Query: 419 VLQVDAERERISLGVK-----QLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADG 473 +L +D E L K + P + + ++V G + + G V Sbjct: 722 LLVLDVEGNNFILSAKYSLINSAQQLPLD--LTQIHPNSVVHGYICNIIETGCFVRFLGR 779 Query: 474 VEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAK 522 + G+ ++ D+ + +G V + V+ + I+LS++ Sbjct: 780 LTGFSPRNKVMDDQRAVPSEAFFIGQSVRSNILDVNSETGRITLSLKQS 828 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 111/576 (19%), Positives = 210/576 (36%), Gaps = 85/576 (14%) Query: 6 AQLFEES-LKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQGELE 61 A FE S + +PG +V+ V+A+D +V ++ P + + Sbjct: 478 ASAFEGSVFTHSDVKPGMVVKAKVIAVDSFGAIVQFPSGVKALCPLRHMSEFDIVKPRKK 537 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYED---AETVTGVINGKVKG 118 +VG E+ + + + + K ++ + + +Y D G I K Sbjct: 538 FKVGAELIFRVLGCK---SKRITVTHKKTLLKSKLGIISSYTDATEGLITHGWITKIEKH 594 Query: 119 GFTVEL-NGIRAFLPGSLVDVRPVRD--TLHLEGKELEFKVIKLDQKRNNVVVSRRAVIE 175 G + NG++ F P S + + P + ++ G+ ++ +V + +V SRR + Sbjct: 595 GCFIRFYNGVQGFAPSSELGLEPGCNTSLMYHVGQVVKCRV------KGSVPASRRINLS 648 Query: 176 SENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL---GGVDGLLHITDMAW--KRVKH 230 R + ++ G V G+V +T + V++ G + G + +A Sbjct: 649 FIIKPTRISEDDMVKLGSVVGGVVDRVTPHAIIVNVSAKGYLKGTISTEHLADHQGHAAL 708 Query: 231 PSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIA---KRYPEGTKLTGRVTNL 287 + G E ++L D E L K + + + + + G + N+ Sbjct: 709 MKSTLKPGYEFD-QLLVLDVEGNNFILSAKYSLINSAQQLPLDLTQIHPNSVVHGYICNI 767 Query: 288 TDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLK 347 + GCFV + G +++ + + PS+ +G V +LD++ E RI+L LK Sbjct: 768 IETGCFVRFLGRLTGFSPRNKVMDDQRAV-PSEAFFIGQSVRSNILDVNSETGRITLSLK 826 Query: 348 QC---------------------------KANPWQQFAETHNKGDRVEGKIKSITDFGIF 380 Q + ++AE N G +EGKI DFG+ Sbjct: 827 QSCCSSTDASFIQEYFLLEEKIAKLQLSDSEHSELKWAEGFNIGTVIEGKIHDAKDFGVV 886 Query: 381 IGLD--GGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVK---- 434 I + + G + ++ G + AVVL V + L +K Sbjct: 887 ISFEKYNDVFGFITHYQLTAER-----------GSTVQAVVLDVAKTERLVDLSLKPEFL 935 Query: 435 -QLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATL 493 + ED N+ K+ ++ A VE+ E YL +S +R + Sbjct: 936 DRHKEDSSNSQAGKKKRRREAYKELQPHQTVNAIVEIVK--ENYLASSFIARKQFLH--- 990 Query: 494 VLSVGDEVEAKFTGVDRKN--RAISLSVRAKDEADE 527 G V A + + + L +++ EA E Sbjct: 991 ----GQSVIASVMALPSPSTVGRLLLVLKSVSEATE 1022 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 90/552 (16%), Positives = 189/552 (34%), Gaps = 42/552 (7%) Query: 9 FEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQ----- 63 F + PG + GVV +++ + + + A + + EI+ Sbjct: 119 FANKITLKNISPGMKLWGVVAEVNEKDLGISLPGGLRGLVRASEAFDPLFSNEIKDAEGI 178 Query: 64 -------VGDEVDVALDAVEDGFGE-----TLLSREKAKRHEAWITLEKAYEDAETVTGV 111 +G V + ++D E LS + H+ + A ++ +T Sbjct: 179 FLPRIFHIGQLVSCVVLQLDDDKKEKGKRRIWLSLRLSLLHKGFT--LDALQEGMVLTAY 236 Query: 112 INGKVKGGFTVELN--GIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVS 169 + G+ + FLP S + G+ L+ + +D+ V +S Sbjct: 237 VKSIEDHGYILHFGLPSFTGFLPKS----SQAENIEINTGQILQGVIRSIDKAHKVVYLS 292 Query: 170 RRA--VIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVD-LGGVDGLLHITDMAWK 226 + + + ++ L GM V V++ + G + L G + I + Sbjct: 293 SDPDTISKCVTKDLKGISIDLLIPGMMVNARVQSTFENGVMLSFLTYFTGTVDIFHLQTT 352 Query: 227 RV-KHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVT 285 + + N ++ ++L D V L L + +V Sbjct: 353 FPSSNWKDDYNQNKKVNARILFIDPSTRAVGLTLNPHLVNNKAPPCPVKTGDIYDHSKVI 412 Query: 286 NLTDY-GCFVEIEE---GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRR 341 + G +E+ V + ++ + K G V V +L Sbjct: 413 RVDRGLGLLLEVPSTPASTPTYVTLFDVADE-EVRKMEKKYKEGSHVRVRILGFRNLEGL 471 Query: 342 ISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVA 401 LK G V+ K+ ++ FG + G+ L L +S Sbjct: 472 AMGTLKASAFEGSVFTHSDVKPGMVVKAKVIAVDSFGAIVQFPSGVKALCPLRHMS-EFD 530 Query: 402 GEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALN---KKGAIVTGKV 458 + +++K G E+ VL + +RI++ K+ ++ +G I G + Sbjct: 531 IVKPRKKFKVGAELIFRVLGC--KSKRITVTHKKTLLKSKLGIISSYTDATEGLITHGWI 588 Query: 459 TAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLS 518 T ++ G + +GV+G+ +SE + + +L+ VG V+ + G +R I+LS Sbjct: 589 TKIEKHGCFIRFYNGVQGFAPSSELGLEPGCNTSLMYHVGQVVKCRVKGSVPASRRINLS 648 Query: 519 --VRAKDEADEK 528 ++ +++ Sbjct: 649 FIIKPTRISEDD 660 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 77/401 (19%), Positives = 168/401 (41%), Gaps = 36/401 (8%) Query: 148 EGKELEFKVI------KLDQKRNNVVVSRRAVIESENSAERDQLLE---NLQEGMEVKGI 198 G+ + +++ + + K + +S + + + + ++L++ + G V G Sbjct: 1085 IGQTVSARIVAKANKSENNGKNHQWELSIKPEMLTGSIEVENKLVDAEFRISTGQRVTGY 1144 Query: 199 VKNLTDYGAFVDLG-GVDGLLHITDMA--WKRVKHPSEIVNVGDEITVKVLKFDRERTRV 255 V + + ++ + + L + D + ++ + VG ++ VL ++E+ + Sbjct: 1145 VYKVENEWIWLTISRHIKAQLFLLDTSCEPNELQEFQKRFEVGKAVSGYVLSANKEKKLL 1204 Query: 256 SLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDY--GCFVEIEEGVEGLVHVSEMDWTN 313 + L + + +G L GR++ + G V+I + G VH +E+ + Sbjct: 1205 RMVL-----HQFSNLIPHIHKGDTLGGRISKILPGVGGLLVQIGPHLYGKVHFTELKDSW 1259 Query: 314 KNIHPSKVVNVGDVVEVMVLDIDEERR---RISLGLKQC-----KANPWQQFAETHNKGD 365 P + G V+ VL+I + + L L N + + + Sbjct: 1260 -VSDPLSGYHEGQFVKCKVLEIGHSEKGTVHVDLSLWSSLNGMHSPNSRVEKIDNLHSDM 1318 Query: 366 RVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAE 425 V+G +K++T G FI L +D + L+++S E+ RE+ G ++ VL V+ Sbjct: 1319 LVQGYVKNVTSKGCFILLSRKLDARILLANLSDGYV-EKPEREFPIGKLVSGRVLSVEPL 1377 Query: 426 RERISLGVKQ-----LAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELAD-GVEGYLR 479 R+ + +K + + N++ ++ G I+ G + V++ G + + D + G Sbjct: 1378 SRRVEVTLKTSSATSVQKSEVNDFSSIL-VGDIIFGTIKRVESYGLFITIDDTNMVGLCH 1436 Query: 480 ASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 SE S D + + G+ V AK VD + ISL ++ Sbjct: 1437 ISELSDDHISNIETKYKAGERVAAKILKVDEERHRISLGMK 1477 Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 94/584 (16%), Positives = 205/584 (35%), Gaps = 77/584 (13%) Query: 18 TRPGSIV-RGVVVAIDKDVVLV----DAGLKSESAIPAEQFKNAQG---ELEIQVGDEVD 69 + G I V+ +D+ + L+ + + + + + E + + G V Sbjct: 400 VKTGDIYDHSKVIRVDRGLGLLLEVPSTPASTPTYVTLFDVADEEVRKMEKKYKEGSHVR 459 Query: 70 VALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL-NGIR 128 V + + G + + + + + T + V + G V+ +G++ Sbjct: 460 VRILGFRNLEGLAMGTLKASAFEGSVFTHSD-VKPGMVVKAKVIAVDSFGAIVQFPSGVK 518 Query: 129 AFLPGSLVD----VRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQ 184 A P + V+P + G EL F+V+ K + V+ + + ++ Sbjct: 519 ALCPLRHMSEFDIVKPRKKFK--VGAELIFRVLGC--KSKRITVTHKKTL-LKSKLGIIS 573 Query: 185 LLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITV 243 + EG+ G + + +G F+ GV G +++ + + S + +VG + Sbjct: 574 SYTDATEGLITHGWITKIEKHGCFIRFYNGVQGFAPSSELGLEPGCNTSLMYHVGQVVKC 633 Query: 244 KVLKFDRERTRVSLG--LKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEG-- 299 +V R++L +K ++ G+ + G V +T + V + Sbjct: 634 RVKGSVPASRRINLSFIIKPTR----ISEDDMVKLGSVVGGVVDRVTPHAIIVNVSAKGY 689 Query: 300 VEGLVHVSEMDWTNKNIHPSKV-VNVG-DVVEVMVLDIDEERRRISLGLKQCKANPWQQ- 356 ++G + + + K + G + +++VLD+ E L K N QQ Sbjct: 690 LKGTISTEHLADHQGHAALMKSTLKPGYEFDQLLVLDV--EGNNFILSAKYSLINSAQQL 747 Query: 357 --FAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDE 414 + V G I +I + G F+ G + G + + + + G Sbjct: 748 PLDLTQIHPNSVVHGYICNIIETGCFVRFLGRLTGFSPRNKVMDDQRAV-PSEAFFIGQS 806 Query: 415 IAAVVLQVDAERERISLGVKQL---------------------------AEDPFNNWVAL 447 + + +L V++E RI+L +KQ +E W Sbjct: 807 VRSNILDVNSETGRITLSLKQSCCSSTDASFIQEYFLLEEKIAKLQLSDSEHSELKWAEG 866 Query: 448 NKKGAIVTGKVTAVDAKGATVELA--DGVEGYLRASEASRDRVEDATLVLSVGDEVEAKF 505 G ++ GK+ G + + V G++ + + +R G V+A Sbjct: 867 FNIGTVIEGKIHDAKDFGVVISFEKYNDVFGFITHYQLTAER----------GSTVQAVV 916 Query: 506 TGVDRKNRAISLSVRA--KDEADEKDAIATVNKQEDANFSNNAM 547 V + R + LS++ D E + + K++ + + Sbjct: 917 LDVAKTERLVDLSLKPEFLDRHKEDSSNSQAGKKKRRREAYKEL 960 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 85/543 (15%), Positives = 180/543 (33%), Gaps = 50/543 (9%) Query: 7 QLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKS-ESAIPAEQFKNAQGELEIQVG 65 L + + G ++ V +I+ ++ GL S +P + +EI G Sbjct: 216 SLLHKGFTLDALQEGMVLTAYVKSIEDHGYILHFGLPSFTGFLPK---SSQAENIEINTG 272 Query: 66 DEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTG-----VINGKVKGGF 120 + + +++ LS + + K + G + + G Sbjct: 273 QILQGVIRSIDKAHKVVYLSSDPDTISKCVTKDLKGISIDLLIPGMMVNARVQSTFENGV 332 Query: 121 ----------TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSR 170 TV++ ++ P S ++ K++ +++ +D V ++ Sbjct: 333 MLSFLTYFTGTVDIFHLQTTFPSSNWKDDYNQN------KKVNARILFIDPSTRAVGLTL 386 Query: 171 RAVIESENSAERDQLLENLQEGMEVK-GIVKNLTD-YGAFVDLGGVDG----LLHITDMA 224 + + + ++ G V + G +++ + + D+A Sbjct: 387 NPHLVNNKAPPCP-----VKTGDIYDHSKVIRVDRGLGLLLEVPSTPASTPTYVTLFDVA 441 Query: 225 WKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRV 284 + V+ + G + V++L F LK + V G + +V Sbjct: 442 DEEVRKMEKKYKEGSHVRVRILGFRNLEGLAMGTLKASAFEGSVFTHSDVKPGMVVKAKV 501 Query: 285 TNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISL 344 + +G V+ GV+ L + M + + P K VG + VL + +RI++ Sbjct: 502 IAVDSFGAIVQFPSGVKALCPLRHMSEFD-IVKPRKKFKVGAELIFRVLGC--KSKRITV 558 Query: 345 GLKQCKANPWQQFAETH---NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVA 401 K+ ++ +G G I I G FI G+ G S++ Sbjct: 559 THKKTLLKSKLGIISSYTDATEGLITHGWITKIEKHGCFIRFYNGVQGFAPSSELGLE-P 617 Query: 402 GEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAV 461 G Y G + V RI+L + + + + K G++V G V V Sbjct: 618 GCNTSLMYHVGQVVKCRVKGSVPASRRINLSF--IIKPTRISEDDMVKLGSVVGGVVDRV 675 Query: 462 DAKGATVELADG--VEGYLRASEASRDRVEDA--TLVLSVGDEVEAKFTGVDRKNRAISL 517 V ++ ++G + + + A L G E + + +D + L Sbjct: 676 TPHAIIVNVSAKGYLKGTISTEHLADHQGHAALMKSTLKPGYEFD-QLLVLDVEGNNFIL 734 Query: 518 SVR 520 S + Sbjct: 735 SAK 737 Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats. Identities = 92/560 (16%), Positives = 195/560 (34%), Gaps = 83/560 (14%) Query: 18 TRPGSIVRGVVVAIDKDVVLVDAGLKS--ESAIPAEQFKNAQG-----ELEIQVGDEVDV 70 + GS+V GVV + ++V+ K + I E + QG + ++ G E D Sbjct: 662 VKLGSVVGGVVDRVTPHAIIVNVSAKGYLKGTISTEHLADHQGHAALMKSTLKPGYEFD- 720 Query: 71 ALDAVEDGFGETLLSREKAKRHEAWI---TLEKAYEDAETVTGVINGKVKGGFTVELNG- 126 L ++ +LS + + + A L + + + V G I ++ G V G Sbjct: 721 QLLVLDVEGNNFILSAKYSLINSAQQLPLDLTQIHPN-SVVHGYICNIIETGCFVRFLGR 779 Query: 127 IRAFLPGSLV--DVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRA----------VI 174 + F P + V D R V G+ + ++ ++ + + +S + + Sbjct: 780 LTGFSPRNKVMDDQRAVPSEAFFIGQSVRSNILDVNSETGRITLSLKQSCCSSTDASFIQ 839 Query: 175 ESENSAERDQLL-------------ENLQEGMEVKGIVKNLTDYGAFVDL---GGVDGLL 218 E E+ L E G ++G + + D+G + V G + Sbjct: 840 EYFLLEEKIAKLQLSDSEHSELKWAEGFNIGTVIEGKIHDAKDFGVVISFEKYNDVFGFI 899 Query: 219 HITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGT 278 + +R G + VL + V L LK R+ E + Sbjct: 900 THYQLTAER----------GSTVQAVVLDVAKTERLVDLSLKP-------EFLDRHKEDS 942 Query: 279 KLTGRVTNLTDYGCFVEIEEG--VEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDID 336 + + E++ V +V + + ++ + K G V V+ + Sbjct: 943 SNSQAGKKKRRREAYKELQPHQTVNAIVEIVKENYLASSFIARKQFLHGQSVIASVMALP 1002 Query: 337 EER--RRISLGLK------QCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGID 388 R+ L LK + ++ + ++N G V+ +I I + + G Sbjct: 1003 SPSTVGRLLLVLKSVSEATETSSSKRAKKKSSYNVGSLVQAEITEIKPLELRLKFGIGFH 1062 Query: 389 GLVHLSDISWNVAGEEAVREYKKGDEIAAVVL------QVDAERERISLGVKQ------- 435 G VH++++ E ++ G ++A ++ + + + + L +K Sbjct: 1063 GRVHITEVCDENVIENPFSNFRIGQTVSARIVAKANKSENNGKNHQWELSIKPEMLTGSI 1122 Query: 436 LAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVE--DATL 493 E+ + G VTG V V+ + + ++ ++ L + S + E + Sbjct: 1123 EVENKLVDAEFRISTGQRVTGYVYKVENEWIWLTISRHIKAQLFLLDTSCEPNELQEFQK 1182 Query: 494 VLSVGDEVEAKFTGVDRKNR 513 VG V +++ + Sbjct: 1183 RFEVGKAVSGYVLSANKEKK 1202 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 45/260 (17%), Positives = 90/260 (34%), Gaps = 17/260 (6%) Query: 18 TRPGSIVRGVVVAI--DKDVVLVDAGLKSESAIPAEQFKNA---QGELEIQVGDEVDVAL 72 G + G + I +LV G + + K++ G V + Sbjct: 1218 IHKGDTLGGRISKILPGVGGLLVQIGPHLYGKVHFTELKDSWVSDPLSGYHEGQFVKCKV 1277 Query: 73 DAVEDGFGETL-------LSREKAKRHEAWITLEKAYEDAETVTGVINGKV-KGGFTVEL 124 + T+ S + + V G + KG F + Sbjct: 1278 LEIGHSEKGTVHVDLSLWSSLNGMHSPNSRVEKIDNLHSDMLVQGYVKNVTSKGCFILLS 1337 Query: 125 NGIRAFLPGSLVDVRPVRDTL--HLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 + A + + + V GK + +V+ ++ V V+ + + Sbjct: 1338 RKLDARILLANLSDGYVEKPEREFPIGKLVSGRVLSVEPLSRRVEVTLKTSSATSVQKSE 1397 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLG--GVDGLLHITDMAWKRVKHPSEIVNVGDE 240 ++ G + G +K + YG F+ + + GL HI++++ + + G+ Sbjct: 1398 VNDFSSILVGDIIFGTIKRVESYGLFITIDDTNMVGLCHISELSDDHISNIETKYKAGER 1457 Query: 241 ITVKVLKFDRERTRVSLGLK 260 + K+LK D ER R+SLG+K Sbjct: 1458 VAAKILKVDEERHRISLGMK 1477 >UniRef50_B2XT45 30S ribosomal protein S1 n=2 Tax=Heterosigma akashiwo RepID=B2XT45_HETA2 Length = 269 Score = 175 bits (443), Expect = 6e-42, Method: Composition-based stats. Identities = 63/270 (23%), Positives = 123/270 (45%), Gaps = 19/270 (7%) Query: 1 MTESFAQLFEESLKEI-------ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQF 53 M+ +F FE S E+ + G I+ G V++ +K L+D G K + +P+ + Sbjct: 1 MSINFTSNFENSFFELLFKKYNYQFSKGDIIAGKVISFEKFGTLIDIGAKVLAYLPSSEI 60 Query: 54 KNAQGELE---IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTG 110 + Q L + G+ ++ L ++S ++ K W L++ + ++G Sbjct: 61 SSFQAFLTKQLLNRGELLEFVLTDYRPNKKTLIISLKQLKSIITWQRLKELIREDLILSG 120 Query: 111 VINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSR 170 + K G + LNG++ F+ S + R L L K ++L + +N +++S Sbjct: 121 QVKKSTKQGKLIILNGLKGFVLNSHLPKYYRRK--QLTKLHLPLKFLELSEGKNKILLSC 178 Query: 171 RAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKH 230 + + L+ + G + ++ YG FV++ G+ GLLHI++++ +R+ + Sbjct: 179 KLAHFKNQT-------NFLKPQQVIMGCITDIKSYGLFVNIYGLKGLLHISEISSQRIDN 231 Query: 231 PSEIVNVGDEITVKVLKFDRERTRVSLGLK 260 S+ G I V VL + R R+SL K Sbjct: 232 LSKRFQKGQLIQVTVLYINLNRGRISLTAK 261 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 55/252 (21%), Positives = 111/252 (44%), Gaps = 13/252 (5%) Query: 188 NLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVL 246 +G + G V + +G +D+G V L ++++ + +++N G+ + + Sbjct: 24 QFSKGDIIAGKVISFEKFGTLIDIGAKVLAYLPSSEISSFQAFLTKQLLNRGELLEFVLT 83 Query: 247 KFDRERTRVSLGLKQLGE-DPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVH 305 + + + + LKQL W + + E L+G+V T G + I G++G V Sbjct: 84 DYRPNKKTLIISLKQLKSIITWQRLKELIREDLILSGQVKKSTKQGKLI-ILNGLKGFVL 142 Query: 306 VSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGD 365 S + + +K+ + + L++ E + +I L K ++ Sbjct: 143 NSHLPKYYRRKQLTKL-----HLPLKFLELSEGKNKILLSCKLAH---FKNQTNFLKPQQ 194 Query: 366 RVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAE 425 + G I I +G+F+ + G+ GL+H+S+IS + + + ++KG I VL ++ Sbjct: 195 VIMGCITDIKSYGLFVNI-YGLKGLLHISEIS-SQRIDNLSKRFQKGQLIQVTVLYINLN 252 Query: 426 RERISLGVKQLA 437 R RISL K Sbjct: 253 RGRISLTAKPFE 264 Score = 121 bits (305), Expect = 6e-26, Method: Composition-based stats. Identities = 51/262 (19%), Positives = 112/262 (42%), Gaps = 12/262 (4%) Query: 267 WVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGD 326 + ++ +G + G+V + +G ++I V + SE+ + +++N G+ Sbjct: 18 FKKYNYQFSKGDIIAGKVISFEKFGTLIDIGAKVLAYLPSSEISSFQAFL-TKQLLNRGE 76 Query: 327 VVEVMVLDIDEERRRISLGLKQCKAN-PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDG 385 ++E ++ D ++ + + LKQ K+ WQ+ E + + G++K T G I L Sbjct: 77 LLEFVLTDYRPNKKTLIISLKQLKSIITWQRLKELIREDLILSGQVKKSTKQGKLIIL-N 135 Query: 386 GIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWV 445 G+ G V S + ++ + + L++ + +I L K F N Sbjct: 136 GLKGFVLNSHLPKYYRRKQLTKL-----HLPLKFLELSEGKNKILLSCKLAH---FKNQT 187 Query: 446 ALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKF 505 K ++ G +T + + G V + G++G L SE S R+++ + G ++ Sbjct: 188 NFLKPQQVIMGCITDIKSYGLFVNIY-GLKGLLHISEISSQRIDNLSKRFQKGQLIQVTV 246 Query: 506 TGVDRKNRAISLSVRAKDEADE 527 ++ ISL+ + + + Sbjct: 247 LYINLNRGRISLTAKPFELQKQ 268 Score = 48.4 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 42/98 (42%) Query: 441 FNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDE 500 F + KG I+ GKV + + G +++ V YL +SE S + +L+ G+ Sbjct: 18 FKKYNYQFSKGDIIAGKVISFEKFGTLIDIGAKVLAYLPSSEISSFQAFLTKQLLNRGEL 77 Query: 501 VEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQE 538 +E T + + +S++ + + +++ Sbjct: 78 LEFVLTDYRPNKKTLIISLKQLKSIITWQRLKELIRED 115 >UniRef50_UPI0001BC83D1 30S ribosomal protein S1 n=1 Tax=Bacteroides sp. D2 RepID=UPI0001BC83D1 Length = 844 Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats. Identities = 91/459 (19%), Positives = 184/459 (40%), Gaps = 21/459 (4%) Query: 97 TLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKV 156 + A + + + GV+ + G V++NG+ F+ + + D +++ ++ Sbjct: 351 EISLALDSKDKMQGVVTKLREDGLKVDVNGVEGFVQIRNLSASKISDIRKYFKEKMLIEL 410 Query: 157 IKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG--V 214 I ++ +V + + S + + N + G + VK D D+G + Sbjct: 411 IPIEIGSTGIV---EFTLINTCSDPNNLINANFEIGRTISAKVKYCDDDFVKFDVGHEKI 467 Query: 215 DGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRY 274 +G+ D+ + R + +G E V D E + L LKQL +DPW ++ R Sbjct: 468 EGISFRKDLTYSRFSLLHKQYELGTEHDFIVKNNDFENNTIYLRLKQL-KDPWDSLTIRK 526 Query: 275 PEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSK-VVNVGDVVEVMVL 333 +++ V +Y E++EG+EG++ E+ W + I K + + + V+ +V Sbjct: 527 F--SQVNFLVCRKVNYAFIGELQEGIEGILAYKELSWFSSEIEVIKNSIKLNNNVDCVVK 584 Query: 334 DIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHL 393 DID+E+R I L LK + NP+ ++ +T N+ VE T +GI ++ + Sbjct: 585 DIDKEKRIIYLTLKDRQNNPYFEYLDT-NRNKVVEFFAIEETIYGILGSIESKYQVFIPK 643 Query: 394 SDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAI 453 ++ SWN K G + V+ ++ + + + L P + G I Sbjct: 644 NEQSWN----GDKYNCKIGKKNKVVIKELSNRGDSLIGTFRPLIPHPLALFSNKFDVGQI 699 Query: 454 VTG-KVTAVDAKGA--TVELA-DGVEGYLRASEASRD-RVEDATLVLSVGDEVEAKFTGV 508 + KV GA + + E L + S ++ + D++ + Sbjct: 700 LKPLKVLNTYNWGATFIISIGHKKFEALLFKGDISNLCFIKSCIGIFDNIDKIPLAIKEI 759 Query: 509 DRKNRAISLSVRAKDEAD--EKDAIATVNKQEDANFSNN 545 D + LS++ + + N+ E +N Sbjct: 760 DLDKNRVILSLKEVLKNNLQRSRECKYANEYESIIIGSN 798 Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats. Identities = 69/348 (19%), Positives = 140/348 (40%), Gaps = 23/348 (6%) Query: 162 KRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHIT 221 R + R ES ++ ++ L +++G+V L + G VD+ GV+G + I Sbjct: 329 NREVICYCLRIDTESSLTSTYREISLALDSKDKMQGVVTKLREDGLKVDVNGVEGFVQIR 388 Query: 222 DMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLT 281 +++ ++ + I + ++ V L DP I + G ++ Sbjct: 389 NLSASKISDIRKYFKEKMLIELIPIEI-GSTGIVEFTLINTCSDPNNLINANFEIGRTIS 447 Query: 282 GRVTNLTDYGCFVEIEEG---VEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEE 338 +V D FV+ + G +EG+ ++ ++ ++ K +G + +V + D E Sbjct: 448 AKVKYCDDD--FVKFDVGHEKIEGISFRKDLTYSRFSL-LHKQYELGTEHDFIVKNNDFE 504 Query: 339 RRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISW 398 I L LKQ K +PW T K +V + ++ L GI+G++ ++SW Sbjct: 505 NNTIYLRLKQLK-DPWDSL--TIRKFSQVNFLVCRKVNYAFIGELQEGIEGILAYKELSW 561 Query: 399 NVAGEEAVRE-YKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGK 457 + E ++ K + + VV +D E+ I L +K +P+ ++ N + +V Sbjct: 562 FSSEIEVIKNSIKLNNNVDCVVKDIDKEKRIIYLTLKDRQNNPYFEYLDTN-RNKVVEFF 620 Query: 458 VTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKF 505 G + + ++ +E S + GD+ K Sbjct: 621 AIEETIYGILGSIESKYQVFIPKNEQSWN-----------GDKYNCKI 657 Score = 68.1 bits (165), Expect = 8e-10, Method: Composition-based stats. Identities = 64/393 (16%), Positives = 138/393 (35%), Gaps = 35/393 (8%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGL-KSESAIPAEQFKNAQGEL---EIQVGD 66 +L G + V D D V D G K E + ++ L + ++G Sbjct: 433 NNLINANFEIGRTISAKVKYCDDDFVKFDVGHEKIEGISFRKDLTYSRFSLLHKQYELGT 492 Query: 67 EVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL-N 125 E D + + L ++ K + W +L V ++ KV F EL Sbjct: 493 EHDFIVKNNDFENNTIYLRLKQLK--DPWDSLTIRKFSQ--VNFLVCRKVNYAFIGELQE 548 Query: 126 GIRAFLPGSLVD-----VRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIE----S 176 GI L + + +++++ L ++ V +D+++ + ++ + Sbjct: 549 GIEGILAYKELSWFSSEIEVIKNSIKL-NNNVDCVVKDIDKEKRIIYLTLKDRQNNPYFE 607 Query: 177 ENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVN 236 R++++E + GI+ ++ + + +W K+ Sbjct: 608 YLDTNRNKVVEFFAIEETIYGILGSIESK--------YQVFIPKNEQSWNGDKYNC---K 656 Query: 237 VGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTG-RVTNLTDYGCFVE 295 +G + V + + + + L P + ++ G L +V N ++G Sbjct: 657 IGKKNKVVIKELSNRGDSLIGTFRPLIPHPLALFSNKFDVGQILKPLKVLNTYNWGATFI 716 Query: 296 IEEG---VEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN 352 I G E L+ ++ + + D + + + +ID ++ R+ L LK+ N Sbjct: 717 ISIGHKKFEALLFKGDISNLCFIKSCIGIFDNIDKIPLAIKEIDLDKNRVILSLKEVLKN 776 Query: 353 PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDG 385 Q+ E + E I + G + L G Sbjct: 777 NLQRSRE-CKYANEYESIIIGSNNQGYVVLLKG 808 >UniRef50_UPI0001983EAA PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera RepID=UPI0001983EAA Length = 1821 Score = 171 bits (433), Expect = 8e-41, Method: Composition-based stats. Identities = 88/521 (16%), Positives = 183/521 (35%), Gaps = 52/521 (9%) Query: 20 PGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQ----FKNAQGELEIQVGDEVDVALDAV 75 PG +V V + ++ V++ + F ++ + + +V+ + + Sbjct: 259 PGMMVNARVQSTFENGVMLSFLTYFTGTVDIFHLQTTFPSSNWKDDYNQNKKVNARILFI 318 Query: 76 EDGFGETLLSREKAKRHEAWITLEKAYEDAETVT-GVINGKVKG-GFTVELNGIRAFLPG 133 + L+ + + + + +G G +E+ P Sbjct: 319 DPSTRAVGLTLNPHLVNNKAPPCPV--KTGDIYDHSKVIRVDRGLGLLLEVPST----PA 372 Query: 134 SLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGM 193 S + EG + +++ + + +A + +++ GM Sbjct: 373 S-----TPTYVTYKEGSHVRVRILGFRNLEGLAMGTLKASAFEGSVFTH----SDVKPGM 423 Query: 194 EVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRER 252 VK V + +GA V GV L + M+ + P + VG E+ +VL + Sbjct: 424 VVKAKVIAVDSFGAIVQFPSGVKALCPLRHMSEFDIVKPRKKFKVGAELIFRVLGC--KS 481 Query: 253 TRVSLGLKQLGEDPWVAIAKRYP---EGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEM 309 R+++ K+ + I Y EG G +T + +GCF+ GV+G SE+ Sbjct: 482 KRITVTHKKTLLKSKLGIISSYTDATEGLITHGWITKIEKHGCFIRFYNGVQGFAPSSEL 541 Query: 310 DWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEG 369 + S + +VG VV+ V RRI+L + G V G Sbjct: 542 GLE-PGCNTSLMYHVGQVVKCRVKGSVPASRRINLN-------------DMVKLGSVVGG 587 Query: 370 KIKSITDFGIFIGLD--GGIDGLVHLSDISWNVAGEEAVRE-YKKGDEIAAVVLQVDAER 426 + +T I + + G + G + ++ + ++ K G E +L +D E Sbjct: 588 VVDRVTPHAIIVNVSAKGYLKGTISTEHLADHQGHAALMKSTLKPGYEFD-QLLVLDVEG 646 Query: 427 ERISLGVK-----QLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRAS 481 L K + P + + ++V G + + G V + G+ + Sbjct: 647 NNFILSAKYSLINSAQQLPLD--LTQIHPNSVVHGYICNIIETGCFVRFLGRLTGFSPRN 704 Query: 482 EASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAK 522 + D+ + +G V + V+ + I+LS++ Sbjct: 705 KVMDDQRAVPSEAFFIGQSVRSNILDVNSETGRITLSLKQS 745 Score = 157 bits (398), Expect = 9e-37, Method: Composition-based stats. Identities = 81/419 (19%), Positives = 171/419 (40%), Gaps = 49/419 (11%) Query: 148 EGKELEFKVI------KLDQKRNNVVVSRRAVIESENSAERDQLLE---NLQEGMEVKGI 198 G+ + +++ + + K + +S + + + + ++L++ + G V G Sbjct: 1021 IGQTVSARIVAKANKSENNGKNHQWELSIKPEMLTGSIEVENKLVDAEFRISTGQRVTGY 1080 Query: 199 VKNLTDYGAFVDLG-GVDGLLHITDMA--WKRVKHPSEIVNVGDEITVKVLKFDRERTRV 255 V + + ++ + + L + D + ++ + VG ++ VL ++E+ + Sbjct: 1081 VYKVENEWIWLTISRHIKAQLFLLDTSCEPNELQEFQKRFEVGKAVSGYVLSANKEKKLL 1140 Query: 256 SLGL------------KQLGED------PWVAIAKRYPEGTKLTGRVTNLTDY--GCFVE 295 + L K L D P + +G L GR++ + G V+ Sbjct: 1141 RMVLHQFSVSNGTLDGKVLNIDNQHCNPPIENLIPHIHKGDTLGGRISKILPGVGGLLVQ 1200 Query: 296 IEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERR---RISLGLKQC--- 349 I + G VH +E+ + P + G V+ VL+I + + L L Sbjct: 1201 IGPHLYGKVHFTELKDSW-VSDPLSGYHEGQFVKCKVLEIGHSEKGTVHVDLSLWSSLNG 1259 Query: 350 --KANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVR 407 N + + + V+G +K++T G FI L +D + L+++S E+ R Sbjct: 1260 MHSPNSRVEKIDNLHSDMLVQGYVKNVTSKGCFILLSRKLDARILLANLSDGYV-EKPER 1318 Query: 408 EYKKGDEIAAVVLQVDAERERISLGVKQ-----LAEDPFNNWVALNKKGAIVTGKVTAVD 462 E+ G ++ VL V+ R+ + +K + + N++ ++ G I+ G + V+ Sbjct: 1319 EFPIGKLVSGRVLSVEPLSRRVEVTLKTSSATSVQKSEVNDFSSIL-VGDIIFGTIKRVE 1377 Query: 463 AKGATVELAD-GVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 + G + + D + G SE S D + + G+ V AK VD + ISL ++ Sbjct: 1378 SYGLFITIDDTNMVGLCHISELSDDHISNIETKYKAGERVAAKILKVDEERHRISLGMK 1436 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 109/588 (18%), Positives = 207/588 (35%), Gaps = 101/588 (17%) Query: 6 AQLFEES-LKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQGELE 61 A FE S + +PG +V+ V+A+D +V ++ P + + Sbjct: 406 ASAFEGSVFTHSDVKPGMVVKAKVIAVDSFGAIVQFPSGVKALCPLRHMSEFDIVKPRKK 465 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYED---AETVTGVINGKVKG 118 +VG E+ + + + + K ++ + + +Y D G I K Sbjct: 466 FKVGAELIFRVLGCK---SKRITVTHKKTLLKSKLGIISSYTDATEGLITHGWITKIEKH 522 Query: 119 GFTVEL-NGIRAFLPGSLVDVRPVRD--TLHLEGKELEFKVIKLDQKRNNVVVSRRAVIE 175 G + NG++ F P S + + P + ++ G+ ++ +V + +V SRR + Sbjct: 523 GCFIRFYNGVQGFAPSSELGLEPGCNTSLMYHVGQVVKCRV------KGSVPASRRINLN 576 Query: 176 SENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL---GGVDGLLHITDMAW--KRVKH 230 ++ G V G+V +T + V++ G + G + +A Sbjct: 577 DM-----------VKLGSVVGGVVDRVTPHAIIVNVSAKGYLKGTISTEHLADHQGHAAL 625 Query: 231 PSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIA---KRYPEGTKLTGRVTNL 287 + G E ++L D E L K + + + + + G + N+ Sbjct: 626 MKSTLKPGYEFD-QLLVLDVEGNNFILSAKYSLINSAQQLPLDLTQIHPNSVVHGYICNI 684 Query: 288 TDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLK 347 + GCFV + G +++ + + PS+ +G V +LD++ E RI+L LK Sbjct: 685 IETGCFVRFLGRLTGFSPRNKVMDDQRAV-PSEAFFIGQSVRSNILDVNSETGRITLSLK 743 Query: 348 QC---------------------------KANPWQQFAETHNKGDRVEGKIKSITDFGIF 380 Q + ++AE N G +EGKI DFG+ Sbjct: 744 QSCCSSTDASFIQEYFLLEEKIAKLQLSDSEHSELKWAEGFNIGTVIEGKIHDAKDFGVV 803 Query: 381 IGLD--GGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVK---- 434 I + + G + ++ G + AVVL V + L +K Sbjct: 804 ISFEKYNDVFGFITHYQLTAER-----------GSTVQAVVLDVAKTERLVDLSLKPEFL 852 Query: 435 -QLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADG------------VEGYLRAS 481 + ED N+ K+ ++ A VE+ GY S Sbjct: 853 DRHKEDSSNSQAGKKKRRREAYKELQPHQTVNAIVEIVKENYLVLSLPEYNYAIGYASVS 912 Query: 482 EASRDRVEDATLVLSVGDEVEAKFTGVDRKN--RAISLSVRAKDEADE 527 + + + A G V A + + + L +++ EA E Sbjct: 913 DYNTQKF--AQKQFLHGQSVIASVMALPSPSTVGRLLLVLKSVSEATE 958 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 93/559 (16%), Positives = 193/559 (34%), Gaps = 77/559 (13%) Query: 33 KDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRH 92 V+ VD GL +P+ + + G V V + + G + + + + Sbjct: 352 SKVIRVDRGLGLLLEVPSTPASTPT-YVTYKEGSHVRVRILGFRNLEGLAMGTLKASAFE 410 Query: 93 EAWITLEKAYEDAETVTGVINGKVKGGFTVEL-NGIRAFLPGSLVD----VRPVRDTLHL 147 + T + V + G V+ +G++A P + V+P + Sbjct: 411 GSVFTHSD-VKPGMVVKAKVIAVDSFGAIVQFPSGVKALCPLRHMSEFDIVKPRKKFK-- 467 Query: 148 EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGA 207 G EL F+V+ K + V+ + + ++ + EG+ G + + +G Sbjct: 468 VGAELIFRVLGC--KSKRITVTHKKTL-LKSKLGIISSYTDATEGLITHGWITKIEKHGC 524 Query: 208 FVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDP 266 F+ GV G +++ + + S + +VG + +V R++L Sbjct: 525 FIRFYNGVQGFAPSSELGLEPGCNTSLMYHVGQVVKCRVKGSVPASRRINL--------- 575 Query: 267 WVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEG--VEGLVHVSEMDWTNKNIHPSKV-VN 323 G+ + G V +T + V + ++G + + + K + Sbjct: 576 ----NDMVKLGSVVGGVVDRVTPHAIIVNVSAKGYLKGTISTEHLADHQGHAALMKSTLK 631 Query: 324 VG-DVVEVMVLDIDEERRRISLGLKQCKANPWQQ---FAETHNKGDRVEGKIKSITDFGI 379 G + +++VLD+ E L K N QQ + V G I +I + G Sbjct: 632 PGYEFDQLLVLDV--EGNNFILSAKYSLINSAQQLPLDLTQIHPNSVVHGYICNIIETGC 689 Query: 380 FIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQL--- 436 F+ G + G + + + + G + + +L V++E RI+L +KQ Sbjct: 690 FVRFLGRLTGFSPRNKVMDDQRAV-PSEAFFIGQSVRSNILDVNSETGRITLSLKQSCCS 748 Query: 437 ------------------------AEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELA- 471 +E W G ++ GK+ G + Sbjct: 749 STDASFIQEYFLLEEKIAKLQLSDSEHSELKWAEGFNIGTVIEGKIHDAKDFGVVISFEK 808 Query: 472 -DGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRA--KDEADEK 528 + V G++ + + +R G V+A V + R + LS++ D E Sbjct: 809 YNDVFGFITHYQLTAER----------GSTVQAVVLDVAKTERLVDLSLKPEFLDRHKED 858 Query: 529 DAIATVNKQEDANFSNNAM 547 + + K++ + + Sbjct: 859 SSNSQAGKKKRRREAYKEL 877 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 88/566 (15%), Positives = 207/566 (36%), Gaps = 73/566 (12%) Query: 21 GSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGFG 80 G+++ G + V++ ++ ++ L + G V + V Sbjct: 787 GTVIEGKIHDAKDFGVVISFEKYNDVFGFITHYQ-----LTAERGSTVQAVVLDVAKTER 841 Query: 81 ETLLSRE--------------KAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV---- 122 LS + +A + + K + +TV ++ VK + V Sbjct: 842 LVDLSLKPEFLDRHKEDSSNSQAGKKKRRREAYKELQPHQTVNAIV-EIVKENYLVLSLP 900 Query: 123 ELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRN--NVVVSRRAVIE--SEN 178 E N + S + + L G+ + V+ L +++ ++V E + Sbjct: 901 EYNYAIGYASVSDYNTQKFAQKQFLHGQSVIASVMALPSPSTVGRLLLVLKSVSEATETS 960 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRV-KHPSEIVN 236 S++R + + G V+ + + + G G G +HIT++ + V ++P Sbjct: 961 SSKRAKKKSSYNVGSLVQAEITEIKPLELRLKFGIGFHGRVHITEVCDENVIENPFSNFR 1020 Query: 237 VGDEITVKVL------KFDRERTRVSLGLKQLG-------EDPWVAIAKRYPEGTKLTGR 283 +G ++ +++ + + + + L +K E+ V R G ++TG Sbjct: 1021 IGQTVSARIVAKANKSENNGKNHQWELSIKPEMLTGSIEVENKLVDAEFRISTGQRVTGY 1080 Query: 284 VTNLTDYGCFVEIEEGVEGLVHVSEMDWT-NKNIHPSKVVNVGDVVEVMVLDIDEERRRI 342 V + + ++ I ++ + + + N+ K VG V VL ++E++ + Sbjct: 1081 VYKVENEWIWLTISRHIKAQLFLLDTSCEPNELQEFQKRFEVGKAVSGYVLSANKEKKLL 1140 Query: 343 SLGLKQCKAN------------------PWQQFAETHNKGDRVEGKIKSITD--FGIFIG 382 + L Q + P + +KGD + G+I I G+ + Sbjct: 1141 RMVLHQFSVSNGTLDGKVLNIDNQHCNPPIENLIPHIHKGDTLGGRISKILPGVGGLLVQ 1200 Query: 383 LDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERE---RISLGVKQL--- 436 + + G VH +++ + + + Y +G + VL++ + + L + Sbjct: 1201 IGPHLYGKVHFTELKDSWVSD-PLSGYHEGQFVKCKVLEIGHSEKGTVHVDLSLWSSLNG 1259 Query: 437 --AEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLV 494 + + + +V G V V +KG + L+ ++ + + S VE Sbjct: 1260 MHSPNSRVEKIDNLHSDMLVQGYVKNVTSKGCFILLSRKLDARILLANLSDGYVEKPERE 1319 Query: 495 LSVGDEVEAKFTGVDRKNRAISLSVR 520 +G V + V+ +R + ++++ Sbjct: 1320 FPIGKLVSGRVLSVEPLSRRVEVTLK 1345 Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats. Identities = 95/575 (16%), Positives = 197/575 (34%), Gaps = 98/575 (17%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQG---ELEIQVGDEVDVALD 73 + G I G + I+K + + P+ + G L VG V + Sbjct: 505 DATEGLITHGWITKIEKHGCFIRFYNGVQGFAPSSELGLEPGCNTSLMYHVGQVVKCRV- 563 Query: 74 AVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNG---IRAF 130 G SR I L + V GV++ V ++ ++ Sbjct: 564 -----KGSVPASRR--------INLNDMVKLGSVVGGVVDRVTPHAIIVNVSAKGYLKGT 610 Query: 131 LPGSLVDVRPVR----DTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLL 186 + + + G E + +++ LD + NN ++S + + ++ + L Sbjct: 611 ISTEHLADHQGHAALMKSTLKPGYEFD-QLLVLDVEGNNFILSAKYSL-INSAQQLPLDL 668 Query: 187 ENLQEGMEVKGIVKNLTDYGAFVD-LGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKV 245 + V G + N+ + G FV LG + G + + PSE +G + + Sbjct: 669 TQIHPNSVVHGYICNIIETGCFVRFLGRLTGFSPRNKVMDDQRAVPSEAFFIGQSVRSNI 728 Query: 246 LKFDRERTRVSLGLKQL---------------------------GEDPWVAIAKRYPEGT 278 L + E R++L LKQ E + A+ + GT Sbjct: 729 LDVNSETGRITLSLKQSCCSSTDASFIQEYFLLEEKIAKLQLSDSEHSELKWAEGFNIGT 788 Query: 279 KLTGRVTNLTDYGCFVEIE--EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDID 336 + G++ + D+G + E V G + ++ G V+ +VLD+ Sbjct: 789 VIEGKIHDAKDFGVVISFEKYNDVFGFITHYQLTAER-----------GSTVQAVVLDVA 837 Query: 337 EERRRISLGLKQCKANPWQQFAETHNKG---------------DRVEGKIKSITDFGIFI 381 + R + L LK + ++ + G V ++ + + + + Sbjct: 838 KTERLVDLSLKPEFLDRHKEDSSNSQAGKKKRRREAYKELQPHQTVNAIVEIVKENYLVL 897 Query: 382 GLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAER--ERISLGVKQLAE- 438 L + + S +S + A +++ G + A V+ + + R+ L +K ++E Sbjct: 898 SLPEYNYAIGYAS-VSDYNTQKFAQKQFLHGQSVIASVMALPSPSTVGRLLLVLKSVSEA 956 Query: 439 -----DPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRV-EDAT 492 + G++V ++T + ++ G G + +E + V E+ Sbjct: 957 TETSSSKRAKKKSSYNVGSLVQAEITEIKPLELRLKFGIGFHGRVHITEVCDENVIENPF 1016 Query: 493 LVLSVGDEVEAKFT------GVDRKNRAISLSVRA 521 +G V A+ + KN LS++ Sbjct: 1017 SNFRIGQTVSARIVAKANKSENNGKNHQWELSIKP 1051 Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 73/378 (19%), Positives = 126/378 (33%), Gaps = 31/378 (8%) Query: 148 EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGA 207 G +L V ++++K + + S D L N E + VK++ D+G Sbjct: 130 PGMKLWGVVAEVNEKDLGISLPGGLRGLVRASEAFDPLFSN--EIKVLTAYVKSIEDHGY 187 Query: 208 FVDLG--GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLG------L 259 + G G L + A + ++ +N G + + D+ V L Sbjct: 188 ILHFGLPSFTGFLPKSSQADQNIE-----INTGQILQGVIRSIDKAHKVVYLSSDPDTIS 242 Query: 260 KQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPS 319 K + +D G + RV + + G + G V + + T + + Sbjct: 243 KCVTKDLKGISIDLLIPGMMVNARVQSTFENGVMLSFLTYFTGTVDIFHLQTTFPSSNWK 302 Query: 320 KVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRV-EGKIKSITDFG 378 N V +L ID R + L L N + GD K+ + Sbjct: 303 DDYNQNKKVNARILFIDPSTRAVGLTLNPHLVN-NKAPPCPVKTGDIYDHSKVIRVD--- 358 Query: 379 IFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAE 438 GL L ++ A YK+G + +L +K A Sbjct: 359 ---------RGLGLLLEVPSTPASTPTYVTYKEGSHVRVRILGFRNLEGLAMGTLKASAF 409 Query: 439 DPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVG 498 + + K G +V KV AVD+ GA V+ GV+ S + VG Sbjct: 410 EGSVFTHSDVKPGMVVKAKVIAVDSFGAIVQFPSGVKALCPLRHMSEFDIVKPRKKFKVG 469 Query: 499 DEVEAKFTGVDRKNRAIS 516 E+ + G K++ I+ Sbjct: 470 AELIFRVLGC--KSKRIT 485 Score = 64.6 bits (156), Expect = 9e-09, Method: Composition-based stats. Identities = 53/333 (15%), Positives = 106/333 (31%), Gaps = 72/333 (21%) Query: 185 LLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITV 243 L+N+ GM++ G+V + + + L GG+ GL+ ++ + EI V Sbjct: 124 TLKNISPGMKLWGVVAEVNEKDLGISLPGGLRGLVRASEAFDPLFSN---------EIKV 174 Query: 244 KVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE-EGVEG 302 LT V ++ D+G + G Sbjct: 175 ------------------------------------LTAYVKSIEDHGYILHFGLPSFTG 198 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLG------LKQCKANPWQQ 356 + S ++NI +N G +++ ++ ID+ + + L K + Sbjct: 199 FLPKS--SQADQNIE----INTGQILQGVIRSIDKAHKVVYLSSDPDTISKCVTKDLKGI 252 Query: 357 FAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIA 416 + G V +++S + G+ + G V + + +Y + ++ Sbjct: 253 SIDLLIPGMMVNARVQSTFENGVMLSFLTYFTGTVDIFHLQTTFPSSNWKDDYNQNKKVN 312 Query: 417 AVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEG 476 A +L +D + L + N +N K K + + + G+ G Sbjct: 313 ARILFIDPSTRAVGLTL---------NPHLVNNKAPPCPVKTGDIYDHSKVIRVDRGL-G 362 Query: 477 YLRASEASRDRVEDATLV-LSVGDEVEAKFTGV 508 L E T V G V + G Sbjct: 363 LLL--EVPSTPASTPTYVTYKEGSHVRVRILGF 393 >UniRef50_UPI0000E4A1DE PREDICTED: hypothetical protein n=2 Tax=Strongylocentrotus purpuratus RepID=UPI0000E4A1DE Length = 1545 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 99/603 (16%), Positives = 198/603 (32%), Gaps = 95/603 (15%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVV--VAIDKDVVLVDAGLKSESAIPAEQFKNAQG 58 M++ F S G +R V V ++K LV + +K+ Sbjct: 586 MSDEFV-----SDTSKLYEVGQTLRAKVTEVNVEKKRFLVS--------LKTSDWKSP-- 630 Query: 59 ELEIQVGDEVDVALDAVEDGFGETLLSRE-----------KAKRHEAWITLEKAYEDAET 107 +VGD ++ + ++ LS + + A + + Sbjct: 631 ----KVGDSIEACVMNIDLSSKAVTLSLKPDTIEGCKKSKSKGKKGKKAVASLAEDKGKV 686 Query: 108 VTGV---INGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIK-LDQKR 163 + I + G V L+ ++ V+ G + +D + Sbjct: 687 LMVKSEFILAQTGQGKLVYLS------AKQHLNNFSVQKDAIKIGDTVTIGDSSFVDGRF 740 Query: 164 NNVVVSRRAVIESENSAERDQLLENLQ---EGMEVKGIVKNLTDYGAFVDLGGVDG--LL 218 +V + + + + + G V +VK++ + +++ G G + Sbjct: 741 LAALVKEDKPSKKKEKERKSAAVHDTSQKLVGQIVDAVVKSVKESQVNIEIEGGQGYGRI 800 Query: 219 HITDMAW--KRVKHPSEIVNVGDEITVKVLKFDRER---------TRVSLGLKQL----- 262 H T+++ K +P E +G ++ KV+ R + +L L +L Sbjct: 801 HATEVSDTMKPGSYPLEFFTIGQKVKAKVIGCRRGKRGQHLAVSHGHGALSLLELSTRKS 860 Query: 263 ---------GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMD-WT 312 + + G +T + +V + +EG +H + Sbjct: 861 VMEADSVPSEDQSSENEMNAFQIGQTVTCIINRFHKEILWVHLSRSLEGKIHRLNLSKHA 920 Query: 313 NKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIK 372 + +P G V V+ D E + L + A T G V K+ Sbjct: 921 STLENPESYFKPGQVHRAKVVRQDNEHNMLELSM-------SGCIATTFEVGSVVNCKVT 973 Query: 373 SITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLG 432 I + + L G+ G + +DI ++ E + ++ + + + S+ Sbjct: 974 KILENKAQVQLPYGLQGSMFATDID-DIYQENPLERFEHHKYHRCCISEASTGKHGASVS 1032 Query: 433 VKQLA---------EDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEA 483 ++ D + KKG +V G V KG V L+ + G + + Sbjct: 1033 MRPSQVKKATPPSGYDLEIRTLDDLKKGQVVRGYVRHCSEKGVFVSLSSNLHGRILLKKL 1092 Query: 484 SRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAK-----DEADEKDAIATVNKQE 538 S V+D + V +VG + K +D+K+ I LS +K D E A V ++ Sbjct: 1093 SAFYVKDPSAVFTVGKLLSTKVLSIDKKSGKIELSSSSKDTGLEDPVPEDQRQAGVKRKR 1152 Query: 539 DAN 541 D Sbjct: 1153 DGT 1155 Score = 115 bits (287), Expect = 7e-24, Method: Composition-based stats. Identities = 94/520 (18%), Positives = 182/520 (35%), Gaps = 88/520 (16%) Query: 84 LSREKAKRHEA--WITLEKAYEDAETVTGVINGKVKGGFTV-ELNGIR-AFLPGSLVDVR 139 +S KA+ E W L D E V I+ + G V +L G + AF+P + + Sbjct: 439 MSERKAQGTEMPPWQRL----SDKEIVKVKISKVKQDGLEVIQLPGNKPAFIPKTHLSDH 494 Query: 140 P-VRDT---LHLEGKELEFKVI-KLDQKRNNVVVSRRAVI--ESENSAERDQLLENLQEG 192 P + D + EG ++ + K +V+ + ++ + N E + L+ Sbjct: 495 PDICDALLASYSEGDVIDQALTWSYSGKSRTCIVTCKPLLLNAARNKTEIVRDFSELETN 554 Query: 193 MEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRE 251 M + G++++ YG FV+ + GL M+ + V S++ VG + KV + + E Sbjct: 555 MFLIGVLRHTMSYGVFVEFPNHIVGLAPKAMMSDEFVSDTSKLYEVGQTLRAKVTEVNVE 614 Query: 252 RTRVSLGLK-----------------------------QLGEDPWVAIAKRYPEGTKLTG 282 + R + LK L D K +G K Sbjct: 615 KKRFLVSLKTSDWKSPKVGDSIEACVMNIDLSSKAVTLSLKPDTIEGCKKSKSKGKKGKK 674 Query: 283 RVTNLT-DYG---------CFVEIEEG----VEGLVHVSEMDWTNKNIHPSKVVNVGDV- 327 V +L D G + +G + H++ I V +GD Sbjct: 675 AVASLAEDKGKVLMVKSEFILAQTGQGKLVYLSAKQHLNNFSVQKDAIKIGDTVTIGDSS 734 Query: 328 -VEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGG 386 V+ L + + S ++ + + G V+ +KS+ + + I ++GG Sbjct: 735 FVDGRFLAALVKEDKPSKKKEKERKSAAVHDTSQKLVGQIVDAVVKSVKESQVNIEIEGG 794 Query: 387 I-DGLVHLSDISWN-VAGEEAVREYKKGDEIAAVVLQVDAERER--------------IS 430 G +H +++S G + + G ++ A V+ + + Sbjct: 795 QGYGRIHATEVSDTMKPGSYPLEFFTIGQKVKAKVIGCRRGKRGQHLAVSHGHGALSLLE 854 Query: 431 LGVKQ---------LAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRAS 481 L ++ + N + + G VT + + V L+ +EG + Sbjct: 855 LSTRKSVMEADSVPSEDQSSENEMNAFQIGQTVTCIINRFHKEILWVHLSRSLEGKIHRL 914 Query: 482 EASRD--RVEDATLVLSVGDEVEAKFTGVDRKNRAISLSV 519 S+ +E+ G AK D ++ + LS+ Sbjct: 915 NLSKHASTLENPESYFKPGQVHRAKVVRQDNEHNMLELSM 954 Score = 83.9 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 35/223 (15%), Positives = 83/223 (37%), Gaps = 10/223 (4%) Query: 339 RRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFI-GLDGGIDGLVHLSDIS 397 R + ++ + + + + + V+ KI + G+ + L G + + +S Sbjct: 434 SNRDGMSERKAQGTEMPPW-QRLSDKEIVKVKISKVKQDGLEVIQLPGNKPAFIPKTHLS 492 Query: 398 WNVAG-EEAVREYKKGDEIAAVVL-QVDAERERISLGVKQLAEDPFNNWVALNKKGAIVT 455 + + + Y +GD I + + + K L + N + + + + Sbjct: 493 DHPDICDALLASYSEGDVIDQALTWSYSGKSRTCIVTCKPLLLNAARNKTEIVRDFSELE 552 Query: 456 ------GKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVD 509 G + + G VE + + G + S + V D + + VG + AK T V+ Sbjct: 553 TNMFLIGVLRHTMSYGVFVEFPNHIVGLAPKAMMSDEFVSDTSKLYEVGQTLRAKVTEVN 612 Query: 510 RKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFK 552 + + +S++ D K + + + S+ A+ + K Sbjct: 613 VEKKRFLVSLKTSDWKSPKVGDSIEACVMNIDLSSKAVTLSLK 655 >UniRef50_D0NSW6 rRNA biogenesis protein rrp5 n=1 Tax=Phytophthora infestans T30-4 RepID=D0NSW6_PHYIN Length = 1882 Score = 168 bits (426), Expect = 5e-40, Method: Composition-based stats. Identities = 98/568 (17%), Positives = 200/568 (35%), Gaps = 64/568 (11%) Query: 7 QLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSE-SAIPAEQFKNAQGELEIQVG 65 L L G+ + V +++ +V+ G++ + +P ++ + G Sbjct: 153 SLLHAELSPGSLTKGTSLHATVSSVEDHGAIVNLGIRGVHAFVPRKELTTPAHK-----G 207 Query: 66 DEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTG-----VINGKVKGGF 120 + V + ++ ++ ++++ +A ++ + V G + ++ G Sbjct: 208 QHLLVNVVSMNMHTNTATVTIDRSQVVKAVTR-GDSFTLKQLVPGMLLNVRVEDVLENGL 266 Query: 121 TVEL-NGIRAFLPGSLVDVRPVR--DTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESE 177 +V + A + + + + R + + +G + +++ +D + +S + Sbjct: 267 SVTFLSFFSATVEQNHMSLPCERGWEESYRKGMKARARIVSIDYIAKQITLSMAPHVVHL 326 Query: 178 NSAERDQLLENLQEGMEV-KGIVKNL-TDYGAFVDLGGVD-------------------- 215 E G + + ++ + G + L D Sbjct: 327 QVPE-----SLFSAGDIIEEATIERIDVGIGMLLSLKSQDEDVDMEDASDKKENTTNAKW 381 Query: 216 -----GLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAI 270 G +HI++++ KRV + VG I +VL F S+ + V Sbjct: 382 KAFAPGYVHISNVSDKRVDKLEKKFTVGSSIKCRVLGFSPFDAVASVSCTEHSISQTVLR 441 Query: 271 AKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSK-VVNVGDVVE 329 K GTK+ G++ ++ +G +EI EGV GLV M N + G Sbjct: 442 HKDLKPGTKVNGKILSVESWGILMEISEGVRGLVTSQHMPAFLLNKKANSGKYKAGKTTS 501 Query: 330 VMVLDIDEERRRISLGLKQ---CKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGG 386 VL +D + + L +K P + G G I I ++G+ + Sbjct: 502 ARVLHVDLDANKTYLTMKSGLLSSDLPVLSSFKEATMGLIAHGFITKIGEYGVIVTFYNN 561 Query: 387 IDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFN---- 442 + GLV ++ + E Y G + A V + DA R+R+ L + N Sbjct: 562 VYGLVPMAVL-QQAGIENLEEAYVPGQVVKARVTRCDANRKRLMLSFDTTSNSSGNKPTA 620 Query: 443 --NWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDR-----VEDATLVL 495 + I K+T VD V+ DG+EG L + + V+ Sbjct: 621 APEIASKLVGTKITNVKITDVDTTCFRVQTKDGMEGVLPFVQLTDFPRNTSLVDKIVKRF 680 Query: 496 SVGDEVEAKFTGVDRK-NRAISLSVRAK 522 S GD + V ++ + + LS + Sbjct: 681 SAGDVISEPLLVVSQESDGVLMLSKKPL 708 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 80/358 (22%), Positives = 133/358 (37%), Gaps = 24/358 (6%) Query: 9 FEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL-----EIQ 63 E S + G+ V GVV D D + V + + + + Sbjct: 1160 LEGSAGRALLKEGNSVEGVVSDQDADHLTVKLSGNVTGTLSCVEVSEDVDVVREFQGKYP 1219 Query: 64 VGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGK----VKGG 119 VG V + V+D LS A ++ + + V GVI+ K Sbjct: 1220 VGKRVKCFVLQVDDEKKTVDLSVIHASSAQSQAVV----KSGTIVNGVISTKKSAIRPPS 1275 Query: 120 FTVELNGIRAF--LPGSLVDVRPVRDTLHL----EGKELEFKVIKLDQKRNNVVVSRRAV 173 V++ G+ F + + + + D L L GK + V+ ++ + A+ Sbjct: 1276 IMVQI-GVHTFGRVCITELQTKWENDMLELPKFSVGKVVRCVVLSTSNNHIDLSLREDAL 1334 Query: 174 IESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPS 232 + A++ G V IV T G FV + + + D++ VK P Sbjct: 1335 DSPKAYAKKSSKSAERNVGDLVPAIVATTTSSGCFVRVDRHTTARVMLRDLSDDFVKDPQ 1394 Query: 233 EIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGC 292 G + +V K +SL + +D V EG + G +T + YG Sbjct: 1395 TQFPSGKLVAGRVTKKSDRGLELSLKASVVSDDVSVFKWSDLKEGLTVKGTITKVQTYGV 1454 Query: 293 FVEIEE-GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC 349 FV IE+ + GL H+SE+ ++ + GD V+ VL + E RR+S GLK Sbjct: 1455 FVRIEKTTISGLCHISEVADEKVTQPLDQIFSEGDYVKAKVLKV--EDRRVSFGLKPS 1510 Score = 134 bits (338), Expect = 7e-30, Method: Composition-based stats. Identities = 84/363 (23%), Positives = 145/363 (39%), Gaps = 21/363 (5%) Query: 189 LQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLH--ITDMAWKRVKHPSEIVNVGDEITVKV 245 L+EG V+G+V + V L G V G L V+ VG + V Sbjct: 1169 LKEGNSVEGVVSDQDADHLTVKLSGNVTGTLSCVEVSEDVDVVREFQGKYPVGKRVKCFV 1228 Query: 246 LKFDRERTRVSLGLKQLGEDPWVAIAKRYP-EGTKLTGRVTNLTDYGCFVEIEEGVEGLV 304 L+ D E+ V L + A+ K ++ + + + V+I G V Sbjct: 1229 LQVDDEKKTVDLSVIHASSAQSQAVVKSGTIVNGVISTKKSAIRPPSIMVQIGVHTFGRV 1288 Query: 305 HVSEM--DWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETH- 361 ++E+ W N + K +VG VV +VL I L L++ + + +A+ Sbjct: 1289 CITELQTKWENDMLELPK-FSVGKVVRCVVLS--TSNNHIDLSLREDALDSPKAYAKKSS 1345 Query: 362 -----NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIA 416 N GD V + + T G F+ +D V L D+S + ++ ++ G +A Sbjct: 1346 KSAERNVGDLVPAIVATTTSSGCFVRVDRHTTARVMLRDLSDDFV-KDPQTQFPSGKLVA 1404 Query: 417 AVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADG-VE 475 V + +SL +++D + K+G V G +T V G V + + Sbjct: 1405 GRVTKKSDRGLELSLKASVVSDDVSVFKWSDLKEGLTVKGTITKVQTYGVFVRIEKTTIS 1464 Query: 476 GYLRASEASRDRVEDATL-VLSVGDEVEAKFTGVDRKNRAISLSVRAKD-EADEKDAIAT 533 G SE + ++V + S GD V+AK V ++R +S ++ EA K + Sbjct: 1465 GLCHISEVADEKVTQPLDQIFSEGDYVKAKVLKV--EDRRVSFGLKPSYFEAPVKKPVIK 1522 Query: 534 VNK 536 +K Sbjct: 1523 RSK 1525 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 63/306 (20%), Positives = 119/306 (38%), Gaps = 30/306 (9%) Query: 145 LHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKN--- 201 + GK ++ V+++D ++ V + S A Q ++ G V G++ Sbjct: 1217 KYPVGKRVKCFVLQVDDEKKTVDL-------SVIHASSAQSQAVVKSGTIVNGVISTKKS 1269 Query: 202 -LTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSE--IVNVGDEITVKVLKFDRERTRVSL 257 + V +G G + IT++ K E +VG + VL + L Sbjct: 1270 AIRPPSIMVQIGVHTFGRVCITELQTKWENDMLELPKFSVGKVVRCVVLS--TSNNHIDL 1327 Query: 258 GLKQLGEDP------WVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDW 311 L++ D + + G + V T GCFV ++ V + ++ Sbjct: 1328 SLREDALDSPKAYAKKSSKSAERNVGDLVPAIVATTTSSGCFVRVDRHTTARVMLRDLS- 1386 Query: 312 TNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC--KANPWQQFAETHNKGDRVEG 369 + P G +V V + R + L LK + +G V+G Sbjct: 1387 DDFVKDPQTQFPSGKLVAGRVTK--KSDRGLELSLKASVVSDDVSVFKWSDLKEGLTVKG 1444 Query: 370 KIKSITDFGIFIGLDG-GIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERER 428 I + +G+F+ ++ I GL H+S+++ + + + +GD + A VL+V E R Sbjct: 1445 TITKVQTYGVFVRIEKTTISGLCHISEVADEKVTQPLDQIFSEGDYVKAKVLKV--EDRR 1502 Query: 429 ISLGVK 434 +S G+K Sbjct: 1503 VSFGLK 1508 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 60/419 (14%), Positives = 146/419 (34%), Gaps = 29/419 (6%) Query: 44 SESAIPAEQFKNAQG---ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEK 100 + + + + E + VG + + +S + + + + Sbjct: 385 APGYVHISNVSDKRVDKLEKKFTVGSSIKCRVLGFSPFDAVASVSCTEHSISQTVLRHKD 444 Query: 101 AYEDAETVTGVINGKVKGGFTVEL-NGIRAFLPGSLVDV----RPVRDTLHLEGKELEFK 155 + V G I G +E+ G+R + + + + GK + Sbjct: 445 -LKPGTKVNGKILSVESWGILMEISEGVRGLVTSQHMPAFLLNKKANSGKYKAGKTTSAR 503 Query: 156 VIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGV 214 V+ +D N ++ ++ + S + + G+ G + + +YG V V Sbjct: 504 VLHVDLDANKTYLTMKSGLLSSDLPVLSS-FKEATMGLIAHGFITKIGEYGVIVTFYNNV 562 Query: 215 DGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLG------EDPWV 268 GL+ + + +++ E G + +V + D R R+ L Sbjct: 563 YGLVPMAVLQQAGIENLEEAYVPGQVVKARVTRCDANRKRLMLSFDTTSNSSGNKPTAAP 622 Query: 269 AIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNI----HPSKVVNV 324 IA + ++T++ V+ ++G+EG++ ++ +N K + Sbjct: 623 EIASKLVGTKITNVKITDVDTTCFRVQTKDGMEGVLPFVQLTDFPRNTSLVDKIVKRFSA 682 Query: 325 GDVVEVMVLDIDEE-RRRISLGLKQCKANPWQQFA------ETHNKGDRVEGKIKSIT-D 376 GDV+ +L + +E + L K + A + + G + S+ Sbjct: 683 GDVISEPLLVVSQESDGVLMLSKKPLLLEFASRKAILPRTFRDVQENAVLIGYVTSVNVS 742 Query: 377 FGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQ 435 G+F+ + + + G+ ++ G+ + V ++D E+++ +G +Q Sbjct: 743 KGVFVKFLNNLVAVAPKGFLKEQFVGQIDEEMFEIGETVTCSVAKMDKEKKQFVVGFQQ 801 Score = 96.9 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 71/417 (17%), Positives = 144/417 (34%), Gaps = 53/417 (12%) Query: 141 VRDTLHLEGKELEFKVIKLDQ--KRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGI 198 DTL G+ + V+ + KR + +S R + + +L +G + Sbjct: 119 SDDTLFKVGQFVPCVVLATGKTGKRKQIHLSLRTSLLHAELSP-----GSLTKGTSLHAT 173 Query: 199 VKNLTDYGAFVDLG--GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVS 256 V ++ D+GA V+LG GV + ++ + G + V V+ + + Sbjct: 174 VSSVEDHGAIVNLGIRGVHAFVPRKELTTP--------AHKGQHLLVNVVSMNMHTNTAT 225 Query: 257 LGL------KQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMD 310 + + K + + + P G L RV ++ + G V V + M Sbjct: 226 VTIDRSQVVKAVTRGDSFTLKQLVP-GMLLNVRVEDVLENGLSVTFLSFFSATVEQNHMS 284 Query: 311 WTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGK 370 + + G ++ ID ++I+L + + + E Sbjct: 285 LPCERGW-EESYRKGMKARARIVSIDYIAKQITLSMAPHVVHLQVPESLFSAGDIIEEAT 343 Query: 371 IKSI-TDFGIFIGL---DGGID---------------------GLVHLSDISWNVAGEEA 405 I+ I G+ + L D +D G VH+S++S ++ Sbjct: 344 IERIDVGIGMLLSLKSQDEDVDMEDASDKKENTTNAKWKAFAPGYVHISNVSDKRV-DKL 402 Query: 406 VREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKG 465 +++ G I VL S+ + + K G V GK+ +V++ G Sbjct: 403 EKKFTVGSSIKCRVLGFSPFDAVASVSCTEHSISQTVLRHKDLKPGTKVNGKILSVESWG 462 Query: 466 ATVELADGVEGYLRASEASR--DRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 +E+++GV G + + + + G A+ VD L+++ Sbjct: 463 ILMEISEGVRGLVTSQHMPAFLLNKKANSGKYKAGKTTSARVLHVDLDANKTYLTMK 519 Score = 95.8 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 60/371 (16%), Positives = 131/371 (35%), Gaps = 56/371 (15%) Query: 185 LLENLQEGMEVKGIVKNLTDYG--AFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEI 241 + L++GM + G V+ +TD G + L ++G + + + + + VG + Sbjct: 78 TFKALRKGMLLLGCVRQITD-GQDLMISLPNKLNGTVALNECSDDTL------FKVGQFV 130 Query: 242 TVKVLKFDR--ERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE-E 298 VL + +R ++ L L+ ++ GT L V+++ D+G V + Sbjct: 131 PCVVLATGKTGKRKQIHLSLRTSLLHAELSPGSLTK-GTSLHATVSSVEDHGAIVNLGIR 189 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFA 358 GV V E+ + G + V V+ ++ ++ + + + Sbjct: 190 GVHAFVPRKELTTPA---------HKGQHLLVNVVSMNMHTNTATVTIDRSQVVKAVTRG 240 Query: 359 ETHNKGDRVEG-----KIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGD 413 ++ V G +++ + + G+ + V + +S Y+KG Sbjct: 241 DSFTLKQLVPGMLLNVRVEDVLENGLSVTFLSFFSATVEQNHMSLPCE-RGWEESYRKGM 299 Query: 414 EIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGAT------ 467 + A ++ +D ++I+L + +L G I+ G Sbjct: 300 KARARIVSIDYIAKQITLSMAPHVVH-LQVPESLFSAGDIIEEATIERIDVGIGMLLSLK 358 Query: 468 -----VELADGVE---------------GYLRASEASRDRVEDATLVLSVGDEVEAKFTG 507 V++ D + GY+ S S RV+ +VG ++ + G Sbjct: 359 SQDEDVDMEDASDKKENTTNAKWKAFAPGYVHISNVSDKRVDKLEKKFTVGSSIKCRVLG 418 Query: 508 VDRKNRAISLS 518 + S+S Sbjct: 419 FSPFDAVASVS 429 Score = 91.2 bits (225), Expect = 9e-17, Method: Composition-based stats. Identities = 83/568 (14%), Positives = 187/568 (32%), Gaps = 86/568 (15%) Query: 13 LKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL-----EIQVGDE 67 L+ + +PG+ V G +++++ +L++ + ++ + + G Sbjct: 440 LRHKDLKPGTKVNGKILSVESWGILMEISEGVRGLVTSQHMPAFLLNKKANSGKYKAGKT 499 Query: 68 VDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYED--AETVTGVINGKVKGGFTVEL- 124 + V+ +T L+ + L E G I + G V Sbjct: 500 TSARVLHVDLDANKTYLTMKSGLLSSDLPVLSSFKEATMGLIAHGFITKIGEYGVIVTFY 559 Query: 125 NGIRAFLPGSLVDVRPVRDTLH--LEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 N + +P +++ + + + G+ ++ +V + D R +++S ++ +++ Sbjct: 560 NNVYGLVPMAVLQQAGIENLEEAYVPGQVVKARVTRCDANRKRLMLS----FDTTSNSSG 615 Query: 183 DQLLENLQEGMEVKGI-VKNLT----DYGAF-VDL-GGVDGLLHITDMAW-----KRVKH 230 ++ + ++ G + N+ D F V G++G+L + V Sbjct: 616 NKPTAAPEIASKLVGTKITNVKITDVDTTCFRVQTKDGMEGVLPFVQLTDFPRNTSLVDK 675 Query: 231 PSEIVNVGDEITVKVLKFDRE-RTRVSLGLKQLGED------PWVAIAKRYPEGTKLTGR 283 + + GD I+ +L +E + L K L + + E L G Sbjct: 676 IVKRFSAGDVISEPLLVVSQESDGVLMLSKKPLLLEFASRKAILPRTFRDVQENAVLIGY 735 Query: 284 VTNLT-DYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRI 342 VT++ G FV+ + + + ++ +G+ V V +D+E+++ Sbjct: 736 VTSVNVSKGVFVKFLNNLVAVAPKGFLKEQFVGQIDEEMFEIGETVTCSVAKMDKEKKQF 795 Query: 343 SLGLKQCK--------------------------ANPWQQFAETHNKGDRVEGKIKSITD 376 +G +Q N + G + + + Sbjct: 796 VVGFQQSNFVLPTNSTNKARPAFFQAYLREQASVRNAAEVKKSPFALGKSEKTEFVGVRP 855 Query: 377 FGIFIGL---DGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERI---- 429 +G L + + LV + E E+ +GD + ++ D + Sbjct: 856 YGAVFALETDEETVTVLVP--------SVTEKNNEWDEGDTVKLLLTDYDFSKNVYYGAA 907 Query: 430 --SLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKG--ATVELADGVE------GYLR 479 SL VK ++ + G I V AV A V D G ++ Sbjct: 908 DESL-VKSGSKKSRKQKQRVKTGGKIAAATVLAVSPTEKYAVVSFPDPQNADLLQFGVVQ 966 Query: 480 ASEASRDRVEDATLVLSVGDEVEAKFTG 507 + + L + VG +E + Sbjct: 967 LCDFWCPSQTSSQLGIEVGASIECRVVQ 994 Score = 88.1 bits (217), Expect = 9e-16, Method: Composition-based stats. Identities = 69/412 (16%), Positives = 141/412 (34%), Gaps = 55/412 (13%) Query: 167 VVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL------GGVDGLLHI 220 V +A +S E+L G + G++ +++ + + G V + I Sbjct: 1020 VAKTKASSRKTSSKVPKYTQEDLVLGNILTGVISGISENSMEIRVETHKKAGKVRATVSI 1079 Query: 221 TDMAWKRVK----HPSEIVNVGDEITVKVLKFDRERTR---------------VSLGLK- 260 D+ K HP + +V +T +V+ + + L L+ Sbjct: 1080 VDVNGIDEKSGHSHPFDRYSVNTTVTGRVIAVSAKGANKLKPVSEENPAKFHALQLSLRS 1139 Query: 261 ------------QLGEDP-WVAIAKRY---PEGTKLTGRVTNLTDYGCFVEIEEGVEGLV 304 Q P W+ + EG + G V++ V++ V G + Sbjct: 1140 EDVAGDEKVEDVQRFVRPDWLEGSAGRALLKEGNSVEGVVSDQDADHLTVKLSGNVTGTL 1199 Query: 305 HVSEMDWTNKNIHPSK-VVNVGDVVEVMVLDIDEERRRISLG-LKQCKANPWQQFAETHN 362 E+ + + VG V+ VL +D+E++ + L + A Sbjct: 1200 SCVEVSEDVDVVREFQGKYPVGKRVKCFVLQVDDEKKTVDLSVIHASSAQSQAVVKSGTI 1259 Query: 363 KGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEA-VREYKKGDEIAAVVLQ 421 + K +I I + + G V ++++ + + ++ G + VVL Sbjct: 1260 VNGVISTKKSAIRPPSIMVQIGVHTFGRVCITELQTKWENDMLELPKFSVGKVVRCVVLS 1319 Query: 422 VDAERERISLGVKQ-LAEDPF-----NNWVALNKKGAIVTGKVTAVDAKGATVELADGVE 475 I L +++ + P ++ A G +V V + G V + Sbjct: 1320 --TSNNHIDLSLREDALDSPKAYAKKSSKSAERNVGDLVPAIVATTTSSGCFVRVDRHTT 1377 Query: 476 GYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADE 527 + + S D V+D G V + T + +R + LS++A +D+ Sbjct: 1378 ARVMLRDLSDDFVKDPQTQFPSGKLVAGRVTK--KSDRGLELSLKASVVSDD 1427 Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 43/254 (16%), Positives = 88/254 (34%), Gaps = 30/254 (11%) Query: 277 GTKLTGRVTNLTDYG-CFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDI 335 G L G V +TD + + + G V ++E + VG V +VL Sbjct: 85 GMLLLGCVRQITDGQDLMISLPNKLNGTVALNECSDDT-------LFKVGQFVPCVVLAT 137 Query: 336 DE--ERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLD-GGIDGLVH 392 + +R++I L L+ + + + KG + + S+ D G + L G+ V Sbjct: 138 GKTGKRKQIHLSLRTSLLHA-ELSPGSLTKGTSLHATVSSVEDHGAIVNLGIRGVHAFVP 196 Query: 393 LSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLA-------EDPFNNWV 445 +++ KG + V+ ++ ++ + + D F + Sbjct: 197 RKELTTPA---------HKGQHLLVNVVSMNMHTNTATVTIDRSQVVKAVTRGDSFT--L 245 Query: 446 ALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKF 505 G ++ +V V G +V + + S G + A+ Sbjct: 246 KQLVPGMLLNVRVEDVLENGLSVTFLSFFSATVEQNHMSLPCERGWEESYRKGMKARARI 305 Query: 506 TGVDRKNRAISLSV 519 +D + I+LS+ Sbjct: 306 VSIDYIAKQITLSM 319 Score = 61.5 bits (148), Expect = 9e-08, Method: Composition-based stats. Identities = 94/640 (14%), Positives = 199/640 (31%), Gaps = 124/640 (19%) Query: 17 ETRPGSIVRGVVVAID-KDVVLVDAGLKSESAIPA----EQFKNAQGELEIQVGDEVDVA 71 + + +++ G V +++ V V + P EQF E ++G+ V + Sbjct: 725 DVQENAVLIGYVTSVNVSKGVFVKFLNNLVAVAPKGFLKEQFVGQIDEEMFEIGETVTCS 784 Query: 72 LDAVEDGFGETLLS-------------------------REKAKRHEAWITLEKAYEDAE 106 + ++ + ++ RE+A A + + + Sbjct: 785 VAKMDKEKKQFVVGFQQSNFVLPTNSTNKARPAFFQAYLREQASVRNAAEVKKSPFALGK 844 Query: 107 TVTGVINGKVKGG----FTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQK 162 + G G + + +P S+ + ++ EG ++ + D Sbjct: 845 SEKTEFVGVRPYGAVFALETDEETVTVLVP-SVTE----KNNEWDEGDTVKLLLTDYDFS 899 Query: 163 RNNVVVSRRAVIESENSAERDQLLENLQEG-MEVKGIVKNL--TDYGAFVDLGGVD---- 215 +N + + S + + + ++ G V + T+ A V Sbjct: 900 KNVYYGAADESLVKSGSKKSRKQKQRVKTGGKIAAATVLAVSPTEKYAVVSFPDPQNADL 959 Query: 216 ---GLLHITDMAWKRVKHPSEI-VNVGDEITVKVLKFDRER------------------- 252 G++ + D W + S++ + VG I +V++ + Sbjct: 960 LQFGVVQLCDF-WCPSQTSSQLGIEVGASIECRVVQPSLKSVSNSTPFDDLALLALEEEE 1018 Query: 253 --TRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG-------- 302 + ++ + G LTG ++ +++ + +E + Sbjct: 1019 LVAKTKASSRKTSSKVPKYTQEDLVLGNILTGVISGISENSMEIRVETHKKAGKVRATVS 1078 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEER---------------RRISLGLK 347 +V V+ +D + + HP +V V V+ + + + L L+ Sbjct: 1079 IVDVNGIDEKSGHSHPFDRYSVNTTVTGRVIAVSAKGANKLKPVSEENPAKFHALQLSLR 1138 Query: 348 QCKANPWQQFAET-----------------HNKGDRVEGKIKSITDFGIFIGLDGGIDG- 389 ++ + +G+ VEG + + + L G + G Sbjct: 1139 SEDVAGDEKVEDVQRFVRPDWLEGSAGRALLKEGNSVEGVVSDQDADHLTVKLSGNVTGT 1198 Query: 390 LVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNK 449 L + E +Y G + VLQVD E++ + L V + A+ K Sbjct: 1199 LSCVEVSEDVDVVREFQGKYPVGKRVKCFVLQVDDEKKTVDLSVIHASS---AQSQAVVK 1255 Query: 450 KGAIVTGKVT----AVDAKGATVELADGVEGYLRASEASRDRVEDATL--VLSVGDEVEA 503 G IV G ++ A+ V++ G + +E D SVG V Sbjct: 1256 SGTIVNGVISTKKSAIRPPSIMVQIGVHTFGRVCITELQTKWENDMLELPKFSVGKVVRC 1315 Query: 504 KFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFS 543 N I LS+R K +K + N Sbjct: 1316 VVLS--TSNNHIDLSLREDALDSPKAYAKKSSKSAERNVG 1353 >UniRef50_C5ES10 RNA binding S1 domain-containing protein n=2 Tax=Clostridiales RepID=C5ES10_9FIRM Length = 258 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 59/184 (32%), Positives = 96/184 (52%), Gaps = 3/184 (1%) Query: 82 TLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPV 141 L+ E++ W + ED V I+ VKGG L +RAF+P S + V Sbjct: 45 IELAEEESGEGAKWAQFAQMMEDKTVVKVKISEAVKGGVVTSLEEVRAFIPASQLSTEYV 104 Query: 142 RDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKN 201 +GK +E +I +D ++ +V+S R V + AE+ + + G V+G V + Sbjct: 105 EKLEDWQGKYVECVIITVDPEKKRLVLSGREVERGKKEAEKQARMAQFKAGDVVEGTVDS 164 Query: 202 LTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLK 260 + YGAF+ L GVDGLLHI+ ++ +R+KHP ++ G + VK+L D ++SL ++ Sbjct: 165 IKPYGAFIKLDEGVDGLLHISQISTQRIKHPGAVLTEGQTVKVKILSTD--NGKLSLSMR 222 Query: 261 QLGE 264 L E Sbjct: 223 ALAE 226 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 54/211 (25%), Positives = 102/211 (48%), Gaps = 12/211 (5%) Query: 339 RRRISLGLKQC-KANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDIS 397 +R I L ++ + W QFA+ V+ KI G+ L+ + + S +S Sbjct: 42 KRHIELAEEESGEGAKWAQFAQMMEDKTVVKVKISEAVKGGVVTSLEE-VRAFIPASQLS 100 Query: 398 WNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLA----EDPFNNWVALNKKGAI 453 + + +++ G + V++ VD E++R+ L +++ E +A K G + Sbjct: 101 TEYVEK--LEDWQ-GKYVECVIITVDPEKKRLVLSGREVERGKKEAEKQARMAQFKAGDV 157 Query: 454 VTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNR 513 V G V ++ GA ++L +GV+G L S+ S R++ VL+ G V+ K D N Sbjct: 158 VEGTVDSIKPYGAFIKLDEGVDGLLHISQISTQRIKHPGAVLTEGQTVKVKILSTD--NG 215 Query: 514 AISLSVRAK-DEADEKDAIATVNKQEDANFS 543 +SLS+RA ++ +++A T + +E + S Sbjct: 216 KLSLSMRALAEQTADQEAHETFDYKETGSVS 246 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 45/176 (25%), Positives = 78/176 (44%), Gaps = 11/176 (6%) Query: 267 WVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGD 326 W A+ + T + +++ G +EE V + S++ T G Sbjct: 58 WAQFAQMMEDKTVVKVKISEAVKGGVVTSLEE-VRAFIPASQLS-TEYVEKLEDW--QGK 113 Query: 327 VVEVMVLDIDEERRRISLGLKQCK----ANPWQQFAETHNKGDRVEGKIKSITDFGIFIG 382 VE +++ +D E++R+ L ++ + Q GD VEG + SI +G FI Sbjct: 114 YVECVIITVDPEKKRLVLSGREVERGKKEAEKQARMAQFKAGDVVEGTVDSIKPYGAFIK 173 Query: 383 LDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAE 438 LD G+DGL+H+S IS + +G + +L D ++SL ++ LAE Sbjct: 174 LDEGVDGLLHISQISTQRI-KHPGAVLTEGQTVKVKILSTD--NGKLSLSMRALAE 226 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 43/202 (21%), Positives = 90/202 (44%), Gaps = 12/202 (5%) Query: 162 KRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHIT 221 + ++ ++ E A+ Q++E+ VK + G L V + + Sbjct: 41 NKRHIELAEEESGEGAKWAQFAQMMED---KTVVKVKISEAVKGGVVTSLEEVRAFIPAS 97 Query: 222 DMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLG----EDPWVAIAKRYPEG 277 ++ + V+ + G + ++ D E+ R+ L +++ E A ++ G Sbjct: 98 QLSTEYVEKLEDWQ--GKYVECVIITVDPEKKRLVLSGREVERGKKEAEKQARMAQFKAG 155 Query: 278 TKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDE 337 + G V ++ YG F++++EGV+GL+H+S++ T + HP V+ G V+V +L D Sbjct: 156 DVVEGTVDSIKPYGAFIKLDEGVDGLLHISQIS-TQRIKHPGAVLTEGQTVKVKILSTD- 213 Query: 338 ERRRISLGLKQCKANPWQQFAE 359 ++SL ++ Q A Sbjct: 214 -NGKLSLSMRALAEQTADQEAH 234 Score = 60.7 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 37/197 (18%), Positives = 76/197 (38%), Gaps = 19/197 (9%) Query: 5 FAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQ- 63 FAQ+ E+ ++ + V+G VV ++V + IPA Q E Sbjct: 61 FAQMMED-KTVVKVKISEAVKGGVVTSLEEV---------RAFIPASQLSTEYVEKLEDW 110 Query: 64 VGDEVDVALDAVEDGFGETLLS---REKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 G V+ + V+ +LS E+ K+ ++ + V G ++ G Sbjct: 111 QGKYVECVIITVDPEKKRLVLSGREVERGKKEAEKQARMAQFKAGDVVEGTVDSIKPYGA 170 Query: 121 TVEL-NGIRAFLPGSLVDVRPVRDTLHLE--GKELEFKVIKLDQKRNNVVVSRRAVIESE 177 ++L G+ L S + + ++ + G+ ++ K++ D + +S RA+ E Sbjct: 171 FIKLDEGVDGLLHISQISTQRIKHPGAVLTEGQTVKVKILSTD--NGKLSLSMRALAEQT 228 Query: 178 NSAERDQLLENLQEGME 194 E + + + G Sbjct: 229 ADQEAHETFDYKETGSV 245 >UniRef50_D1X7G9 RNA binding S1 domain protein n=1 Tax=Streptomyces sp. ACT-1 RepID=D1X7G9_9ACTO Length = 278 Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 68/261 (26%), Positives = 119/261 (45%), Gaps = 13/261 (4%) Query: 277 GTKLTGRVTNLTDYGCFVEI----EEGVE-GLVHVSEMDWTNKNIHPSKVVNVGDVVEVM 331 G TGRV ++ D VE+ G G + ++ +PS+ V +G + Sbjct: 20 GEARTGRVISVEDSEALVELDGFSGPGKALGRIPRGDLT-RKALGNPSEAVGIGQRLTFE 78 Query: 332 VLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGID--- 388 V+ +D ++ + C+ + F +G G+++S+ +FG+F+ LDG D Sbjct: 79 VIAVDWQQECVWASTSACEDPDLRVFLLGLRRGATHRGQVQSVHNFGVFVNLDGEPDNQC 138 Query: 389 -GLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVAL 447 G + ++SW G G+ + ++ VD R ++ L +K L EDP Sbjct: 139 TGFIRGPELSWRRIG-HPADAVTAGERVVGEIIGVDTRRGQVQLSLKALQEDPLVLVAGQ 197 Query: 448 NKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTG 507 G + TG+VT + GA V +ADGVEG + +E D VE ++S G+E+ + Sbjct: 198 --SGLVTTGQVTKLVPFGAFVRIADGVEGLVHNTEFRDDPVEHPGQIVSEGEEITVRIVE 255 Query: 508 VDRKNRAISLSVRAKDEADEK 528 VD ++LS R + ++ Sbjct: 256 VDLVRHRLTLSTRNLPQNGKR 276 Score = 160 bits (406), Expect = 1e-37, Method: Composition-based stats. Identities = 65/277 (23%), Positives = 122/277 (44%), Gaps = 14/277 (5%) Query: 173 VIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDG------LLHITDMAWK 226 + E ++S L L G G V ++ D A V+L G G + D+ K Sbjct: 1 MTEPQSSEALKDFLSTLLIGEARTGRVISVEDSEALVELDGFSGPGKALGRIPRGDLTRK 60 Query: 227 RVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTN 286 + +PSE V +G +T +V+ D ++ V + G G+V + Sbjct: 61 ALGNPSEAVGIGQRLTFEVIAVDWQQECVWASTSACEDPDLRVFLLGLRRGATHRGQVQS 120 Query: 287 LTDYGCFVEIE----EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRI 342 + ++G FV ++ G + E+ W + HP+ V G+ V ++ +D R ++ Sbjct: 121 VHNFGVFVNLDGEPDNQCTGFIRGPELSW-RRIGHPADAVTAGERVVGEIIGVDTRRGQV 179 Query: 343 SLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAG 402 L LK + +P A G G++ + FG F+ + G++GLVH ++ + Sbjct: 180 QLSLKALQEDPLVLVAG--QSGLVTTGQVTKLVPFGAFVRIADGVEGLVHNTEF-RDDPV 236 Query: 403 EEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAED 439 E + +G+EI +++VD R R++L + L ++ Sbjct: 237 EHPGQIVSEGEEITVRIVEVDLVRHRLTLSTRNLPQN 273 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 77/263 (29%), Positives = 127/263 (48%), Gaps = 24/263 (9%) Query: 105 AETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHL----------EGKELEF 154 E TG + VEL+G PG + P D G+ L F Sbjct: 20 GEARTGRVISVEDSEALVELDGFSG--PGKALGRIPRGDLTRKALGNPSEAVGIGQRLTF 77 Query: 155 KVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG- 213 +VI +D ++ V S A + + L L+ G +G V+++ ++G FV+L G Sbjct: 78 EVIAVDWQQECVWASTSACEDPDLRV----FLLGLRRGATHRGQVQSVHNFGVFVNLDGE 133 Query: 214 ----VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVA 269 G + +++W+R+ HP++ V G+ + +++ D R +V L LK L EDP V Sbjct: 134 PDNQCTGFIRGPELSWRRIGHPADAVTAGERVVGEIIGVDTRRGQVQLSLKALQEDPLVL 193 Query: 270 IAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVE 329 +A G TG+VT L +G FV I +GVEGLVH +E + HP ++V+ G+ + Sbjct: 194 VA--GQSGLVTTGQVTKLVPFGAFVRIADGVEGLVHNTEFR-DDPVEHPGQIVSEGEEIT 250 Query: 330 VMVLDIDEERRRISLGLKQCKAN 352 V ++++D R R++L + N Sbjct: 251 VRIVEVDLVRHRLTLSTRNLPQN 273 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 60/261 (22%), Positives = 107/261 (40%), Gaps = 23/261 (8%) Query: 21 GSIVRGVVVAIDKDVVLVDAG-----LKSESAIPAEQFKNA---QGELEIQVGDEVDVAL 72 G G V++++ LV+ K+ IP + +G + + Sbjct: 20 GEARTGRVISVEDSEALVELDGFSGPGKALGRIPRGDLTRKALGNPSEAVGIGQRLTFEV 79 Query: 73 DAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNG-----I 127 AV+ S + + + L T G + G V L+G Sbjct: 80 IAVDWQQECVWASTSACEDPDLRVFLLG-LRRGATHRGQVQSVHNFGVFVNLDGEPDNQC 138 Query: 128 RAFLPGSLVDVRPVRDTLHLE--GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQL 185 F+ G + R + G+ + ++I +D +R V +S +A+ E Q Sbjct: 139 TGFIRGPELSWRRIGHPADAVTAGERVVGEIIGVDTRRGQVQLSLKALQEDPLVLVAGQS 198 Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 G+ G V L +GAFV + GV+GL+H T+ V+HP +IV+ G+EITV+ Sbjct: 199 ------GLVTTGQVTKLVPFGAFVRIADGVEGLVHNTEFRDDPVEHPGQIVSEGEEITVR 252 Query: 245 VLKFDRERTRVSLGLKQLGED 265 +++ D R R++L + L ++ Sbjct: 253 IVEVDLVRHRLTLSTRNLPQN 273 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 39/184 (21%), Positives = 72/184 (39%), Gaps = 10/184 (5%) Query: 352 NPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDG-----GIDGLVHLSDISWNVAGEEAV 406 + F T G+ G++ S+ D + LDG G + D++ G Sbjct: 8 EALKDFLSTLLIGEARTGRVISVEDSEALVELDGFSGPGKALGRIPRGDLTRKALG-NPS 66 Query: 407 REYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGA 466 G + V+ VD ++E + + ++ ++GA G+V +V G Sbjct: 67 EAVGIGQRLTFEVIAVDWQQECVWASTSACEDPDLRVFLLGLRRGATHRGQVQSVHNFGV 126 Query: 467 TVELA----DGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAK 522 V L + G++R E S R+ ++ G+ V + GVD + + LS++A Sbjct: 127 FVNLDGEPDNQCTGFIRGPELSWRRIGHPADAVTAGERVVGEIIGVDTRRGQVQLSLKAL 186 Query: 523 DEAD 526 E Sbjct: 187 QEDP 190 Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 62/166 (37%), Gaps = 13/166 (7%) Query: 18 TRPGSIVRGVVVAIDKDVVLVDAGL----KSESAIPAEQFK---NAQGELEIQVGDEVDV 70 R G+ RG V ++ V V+ + I + + G+ V Sbjct: 108 LRRGATHRGQVQSVHNFGVFVNLDGEPDNQCTGFIRGPELSWRRIGHPADAVTAGERVVG 167 Query: 71 ALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL-NGIRA 129 + V+ G+ LS + + + A + TG + V G V + +G+ Sbjct: 168 EIIGVDTRRGQVQLSLKALQED---PLVLVAGQSGLVTTGQVTKLVPFGAFVRIADGVEG 224 Query: 130 FLPGSLVDVRPVRDTLHLE--GKELEFKVIKLDQKRNNVVVSRRAV 173 + + PV + G+E+ +++++D R+ + +S R + Sbjct: 225 LVHNTEFRDDPVEHPGQIVSEGEEITVRIVEVDLVRHRLTLSTRNL 270 >UniRef50_C9NIQ1 RNA binding S1 domain protein n=2 Tax=Streptomyces RepID=C9NIQ1_9ACTO Length = 503 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 66/190 (34%), Positives = 98/190 (51%), Gaps = 7/190 (3%) Query: 167 VVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGA-FVDLGGVDGLLHITDMAW 225 VV R E + L+ LQ G V G V +G FVD+ G +G ++I +++W Sbjct: 316 VVRARWRTEPTPEDRKWAFLKTLQPGQVVTGTVTETASFGVTFVDVDGYEGFINIPELSW 375 Query: 226 KRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVT 285 + V HP+++V+VG I VL D R +++L L+ + +DP + GT L GRVT Sbjct: 376 RSVAHPADVVSVGQRIHAGVLGVDGVRAQMALSLRAVQDDPMQQL--TGQVGTTLPGRVT 433 Query: 286 NLTDYGCFV---EIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRI 342 + +G FV EIE G GLVH SE+ + P + VG + V +LD+D RRI Sbjct: 434 KIVPFGVFVRIEEIENGFAGLVHNSEL-LGRQEKEPQGGIEVGSTLRVKILDVDLGSRRI 492 Query: 343 SLGLKQCKAN 352 +L +Q Sbjct: 493 TLSQRQADPE 502 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 51/186 (27%), Positives = 87/186 (46%), Gaps = 12/186 (6%) Query: 261 QLGEDPWVAIAKRYP---EGTKLTGRVTNLTDYGC-FVEIEEGVEGLVHVSEMDWTNKNI 316 + P G +TG VT +G FV++ +G EG +++ E+ W Sbjct: 322 RTEPTPEDRKWAFLKTLQPGQVVTGTVTETASFGVTFVDV-DGYEGFINIPELSW-RSVA 379 Query: 317 HPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITD 376 HP+ VV+VG + VL +D R +++L L+ + +P QQ T G + G++ I Sbjct: 380 HPADVVSVGQRIHAGVLGVDGVRAQMALSLRAVQDDPMQQL--TGQVGTTLPGRVTKIVP 437 Query: 377 FGIFI---GLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGV 433 FG+F+ ++ G GLVH S++ +E + G + +L VD RI+L Sbjct: 438 FGVFVRIEEIENGFAGLVHNSEL-LGRQEKEPQGGIEVGSTLRVKILDVDLGSRRITLSQ 496 Query: 434 KQLAED 439 +Q + Sbjct: 497 RQADPE 502 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 11/183 (6%) Query: 348 QCKANPWQQFA---ETHNKGDRVEGKIKSITDFGI-FIGLDGGIDGLVHLSDISWNVAGE 403 + + P + +T G V G + FG+ F+ +D G +G +++ ++SW Sbjct: 322 RTEPTPEDRKWAFLKTLQPGQVVTGTVTETASFGVTFVDVD-GYEGFINIPELSWRSVA- 379 Query: 404 EAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDA 463 G I A VL VD R +++L ++ + +DP G + G+VT + Sbjct: 380 HPADVVSVGQRIHAGVLGVDGVRAQMALSLRAVQDDPMQQLTGQ--VGTTLPGRVTKIVP 437 Query: 464 KGATV---ELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 G V E+ +G G + SE + ++ + VG + K VD +R I+LS R Sbjct: 438 FGVFVRIEEIENGFAGLVHNSELLGRQEKEPQGGIEVGSTLRVKILDVDLGSRRITLSQR 497 Query: 521 AKD 523 D Sbjct: 498 QAD 500 Score = 72.3 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 2/90 (2%) Query: 438 EDPFNNWVALNKKGAIVTGKVTAVDAKGA-TVELADGVEGYLRASEASRDRVEDATLVLS 496 ED ++ + G +VTG VT + G V++ DG EG++ E S V V+S Sbjct: 328 EDRKWAFLKTLQPGQVVTGTVTETASFGVTFVDV-DGYEGFINIPELSWRSVAHPADVVS 386 Query: 497 VGDEVEAKFTGVDRKNRAISLSVRAKDEAD 526 VG + A GVD ++LS+RA + Sbjct: 387 VGQRIHAGVLGVDGVRAQMALSLRAVQDDP 416 Score = 70.4 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 58/166 (34%), Gaps = 14/166 (8%) Query: 18 TRPGSIVRGVVVAIDKDVV-LVDAGLKSESAIPAEQ---FKNAQGELEIQVGDEVDVALD 73 +PG +V G V V VD E I + A + VG + + Sbjct: 338 LQPGQVVTGTVTETASFGVTFVDVDG-YEGFINIPELSWRSVAHPADVVSVGQRIHAGVL 396 Query: 74 AVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL----NGIRA 129 V+ + LS +A + + L + T+ G + V G V + NG Sbjct: 397 GVDGVRAQMALSL-RAVQDDPMQQLTG--QVGTTLPGRVTKIVPFGVFVRIEEIENGFAG 453 Query: 130 FLPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRAV 173 + S + R ++ G L K++ +D + +S+R Sbjct: 454 LVHNSELLGRQEKEPQGGIEVGSTLRVKILDVDLGSRRITLSQRQA 499 Score = 42.3 bits (98), Expect = 0.050, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 39/96 (40%), Gaps = 6/96 (6%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLV---DAGLKSESAIPAEQ---FK 54 M S + ++ ++++ + G+ + G V I V V + + + + Sbjct: 405 MALSLRAVQDDPMQQLTGQVGTTLPGRVTKIVPFGVFVRIEEIENGFAGLVHNSELLGRQ 464 Query: 55 NAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAK 90 + + I+VG + V + V+ G LS+ +A Sbjct: 465 EKEPQGGIEVGSTLRVKILDVDLGSRRITLSQRQAD 500 >UniRef50_C9LAT8 Ribosomal protein S1 n=10 Tax=Clostridiales RepID=C9LAT8_RUMHA Length = 250 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 57/186 (30%), Positives = 105/186 (56%), Gaps = 3/186 (1%) Query: 78 GFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVD 137 + S + W LE+ ED + G VKGG + GIRAF+P S + Sbjct: 33 KEIDASFSNFRDDDMLIWDKLEQMKEDKTEFEVSVEGIVKGGVIAYVEGIRAFIPVSKLA 92 Query: 138 VRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKG 197 + V + K + +V ++D++ N +V+S + +++ + AE+ +++++ G V+G Sbjct: 93 LNYVENPEDFLKKTITVRVFEVDEQENRLVLSAKEILKEKADAEKRSKIDDIKVGSIVEG 152 Query: 198 IVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVS 256 V++L YGAF+DLG G+ GL+H++ ++ KR+K P ++++GD + KV+K E ++S Sbjct: 153 TVESLQTYGAFIDLGDGISGLVHVSQISEKRIKSPKAVLSIGDTVKAKVIK--NEDGKIS 210 Query: 257 LGLKQL 262 L +K L Sbjct: 211 LSMKAL 216 Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats. Identities = 51/206 (24%), Positives = 95/206 (46%), Gaps = 10/206 (4%) Query: 354 WQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGD 413 W + + E ++ I G+ ++ GI + +S ++ N E KK Sbjct: 50 WDKLEQMKEDKTEFEVSVEGIVKGGVIAYVE-GIRAFIPVSKLALNYV-ENPEDFLKK-- 105 Query: 414 EIAAVVLQVDAERERISLGVKQLAED----PFNNWVALNKKGAIVTGKVTAVDAKGATVE 469 I V +VD + R+ L K++ ++ + + K G+IV G V ++ GA ++ Sbjct: 106 TITVRVFEVDEQENRLVLSAKEILKEKADAEKRSKIDDIKVGSIVEGTVESLQTYGAFID 165 Query: 470 LADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKD 529 L DG+ G + S+ S R++ VLS+GD V+AK ++ ISLS++A +E E+ Sbjct: 166 LGDGISGLVHVSQISEKRIKSPKAVLSIGDTVKAKVIK--NEDGKISLSMKALNEIAEEK 223 Query: 530 AIATVNKQEDANFSNNAMAEAFKAAK 555 + ++ + ++ FK K Sbjct: 224 EEEPDYELPESEEISTSLGSLFKNLK 249 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 46/174 (26%), Positives = 77/174 (44%), Gaps = 11/174 (6%) Query: 267 WVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGD 326 W + + + T+ V + G +E G+ + VS++ N +P + Sbjct: 50 WDKLEQMKEDKTEFEVSVEGIVKGGVIAYVE-GIRAFIPVSKLAL-NYVENPEDFLK--K 105 Query: 327 VVEVMVLDIDEERRRISLG----LKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIG 382 + V V ++DE+ R+ L LK+ + + G VEG ++S+ +G FI Sbjct: 106 TITVRVFEVDEQENRLVLSAKEILKEKADAEKRSKIDDIKVGSIVEGTVESLQTYGAFID 165 Query: 383 LDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQL 436 L GI GLVH+S IS + GD + A V++ E +ISL +K L Sbjct: 166 LGDGISGLVHVSQISEKRI-KSPKAVLSIGDTVKAKVIK--NEDGKISLSMKAL 216 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 41/160 (25%), Positives = 80/160 (50%), Gaps = 9/160 (5%) Query: 194 EVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERT 253 E + V+ + G + G+ + ++ +A V++P + + ITV+V + D + Sbjct: 62 EFEVSVEGIVKGGVIAYVEGIRAFIPVSKLALNYVENPEDFLKK--TITVRVFEVDEQEN 119 Query: 254 RVSLGLKQLGEDPWV----AIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEM 309 R+ L K++ ++ + G+ + G V +L YG F+++ +G+ GLVHVS++ Sbjct: 120 RLVLSAKEILKEKADAEKRSKIDDIKVGSIVEGTVESLQTYGAFIDLGDGISGLVHVSQI 179 Query: 310 DWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC 349 + P V+++GD V+ V I E +ISL +K Sbjct: 180 S-EKRIKSPKAVLSIGDTVKAKV--IKNEDGKISLSMKAL 216 Score = 48.8 bits (115), Expect = 5e-04, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 36/97 (37%), Gaps = 5/97 (5%) Query: 10 EESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ---GELEIQVGD 66 E+ K + + GSIV G V ++ +D G + Q + + + +GD Sbjct: 136 EKRSKIDDIKVGSIVEGTVESLQTYGAFIDLGDGISGLVHVSQISEKRIKSPKAVLSIGD 195 Query: 67 EVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYE 103 V + ED G+ LS + E YE Sbjct: 196 TVKAKVIKNED--GKISLSMKALNEIAEEKEEEPDYE 230 Score = 47.3 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 68/174 (39%), Gaps = 18/174 (10%) Query: 7 QLFEESLKEIETRPGSIVRGVVVA-IDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVG 65 + +E E E IV+G V+A ++ + S + +N + L+ Sbjct: 54 EQMKEDKTEFEVSVEGIVKGGVIAYVEGIRAFIPV-----SKLALNYVENPEDFLK---- 104 Query: 66 DEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYED---AETVTGVINGKVKGGFTV 122 + V + V++ +LS ++ + +A +D V G + G + Sbjct: 105 KTITVRVFEVDEQENRLVLSAKEILKEKADAEKRSKIDDIKVGSIVEGTVESLQTYGAFI 164 Query: 123 ELN-GIRAFLPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRAV 173 +L GI + S + + ++ + G ++ KVIK + + +S +A+ Sbjct: 165 DLGDGISGLVHVSQISEKRIKSPKAVLSIGDTVKAKVIK--NEDGKISLSMKAL 216 >UniRef50_A9UQD5 Predicted protein (Fragment) n=1 Tax=Monosiga brevicollis RepID=A9UQD5_MONBE Length = 1691 Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats. Identities = 90/529 (17%), Positives = 192/529 (36%), Gaps = 83/529 (15%) Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEK---------AYEDAETVTGV 111 E+ VG V+ + + L +++ R A L++ AY + + Sbjct: 1103 ELAVGQVVEAEVTKAGQTQLQLRLPEKRSGRVLATEVLDENDTSAQPFKAYHKGDKIQVR 1162 Query: 112 INGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRR 171 I G R F+P + K +K ++ S Sbjct: 1163 ILGFRD-------QKTRRFMPITQ-------------------KFLKRHVAECSLKPSVL 1196 Query: 172 AVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDM--AWKRV 228 A E ER+ ++ G E G+V + + +V L V G +++ ++ A Sbjct: 1197 AAKELPPMLEREA----VEVGQERWGVVSEVGERCLWVLLAPNVRGRINLVNLGAAATDP 1252 Query: 229 KHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLT 288 K + +G ++ + + K L + ++ G+ ++ + + Sbjct: 1253 KALKKQFGIGMRHKFRI---------IIMSEKLLELELASESSQEIHVGSVVSASLKRIV 1303 Query: 289 DYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVL---------DIDEER 339 + + + G G V ++++D + P K ++ V +V+ ++ Sbjct: 1304 NRFGIMHLGHGRFGAVDITDVDDKL-HAEPFKTLDRSKVYRAVVIGGENLAATGNMGSAI 1362 Query: 340 RRISLGLKQCKAN------PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHL 393 I L L+ + E + G + + TD G+F+ L + V + Sbjct: 1363 GDIRLSLRPSEVEGDAATKASVLRMEDVDTDQVHRGVVCNATDEGVFVALSRNVTARVQI 1422 Query: 394 SDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNW---VALNKK 450 +++S ++ + + +K G + ++ R+ + +K+ DP + ++ Sbjct: 1423 ANLS-DLFVRDIKKAFKVGTLVQGRIMA--KTDGRLEMSLKKSDVDPSGTTLLRIDTLEQ 1479 Query: 451 GAIVTGKVTAVDAKGATVELAD--GVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGV 508 G VTG + V++ G + + D + G SE + R+ED + S GD V+A V Sbjct: 1480 GQHVTGVIKRVESYGVFIVIDDSANLTGMAHISECADQRIEDLNKLYSAGDAVKAVVLKV 1539 Query: 509 DRKNRAISLSVRAK--------DEADEKDAIATVNKQEDANFSNNAMAE 549 D + ISL ++ DE A+ + + ++A A+ Sbjct: 1540 DVDKKRISLGIKPSYFDDAGLPQAMDESADEASAADGDASGDESDADAD 1588 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 97/565 (17%), Positives = 186/565 (32%), Gaps = 65/565 (11%) Query: 6 AQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESA--IPAEQFKNAQG--ELE 61 A+L RPG VRG V + +++ +G S + +Q + E Sbjct: 315 AELSTNEAVMSTLRPGLQVRGKVQQVHAKGLVLQSGGFSIGIHHVHFDQLPTEKKTTEQL 374 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 VG + + ++ L S + + V F Sbjct: 375 YTVGQTLTARVIFIDLANKVILASLRQPHLQ--IDDCTLPLPIGTRLPSCHVRFVDQAFG 432 Query: 122 VELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 V G A PG V DT + G ++++ + R E A+ Sbjct: 433 VLAAGQPA--PGHARGVPAEEDTPEVLGFAHISRLLEEHVETVPKSFRRGTAHEGRVVAQ 490 Query: 182 RDQ------------------LLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITD 222 + E+++ G+ V+G V +L G ++L G+ + Sbjct: 491 QPFDGIYSFSFAPKDLKVPFLAAESIEVGLLVQGSVLSLIPSGMVIELASGIQARVPSEH 550 Query: 223 MAWKRVKHPSEIVNVGDEITVKVLKFDRERT---RVSLGLKQLGED---PWVAIAKRYPE 276 +A + HP + GD++ +VL ++ + R+ + LK+ P + Sbjct: 551 LADVMLTHPEKKFKAGDKVKGRVLSNEKLKGSKHRIKVTLKKTLVRSDLPIIKNMHDAQP 610 Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDID 336 G + G ++ + D GC V +S + N + VVE VL+ D Sbjct: 611 GMRTHGCISKVMDKGCIVSFYNQAR---RLSALPLFQNNAILANRGCKFMVVECGVLNCD 667 Query: 337 EERRRISLGLKQCKANPWQQFAETHNKGDRVEG---------------KIKSITDFGIFI 381 + + L + K + + A G +K + + Sbjct: 668 PQENSLILTFRAAKTSVADRGARDAQLKRIEAGSLEAVEVVAVAEDMLTVKFVESPLVQT 727 Query: 382 GLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVK-----QL 436 L G HL+D R YKKGD++ AVVL+ R+++ K Q Sbjct: 728 ELRAG-----HLTD--HPSLATALCRTYKKGDKLEAVVLE--KRGRRVTISCKPQLKAQT 778 Query: 437 AEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLS 496 + + K G + + +V G + G+ G + + ++ V++ Sbjct: 779 KVESLPKELDDLKLGQVFPAYIRSVLDYGCFIGTIHGLSGLVPLRQLAKRYVDNPKAFFH 838 Query: 497 VGDEVEAKFTGVDRKNRAISLSVRA 521 V + ++++ S++ Sbjct: 839 PDQTVLVAVSEINKEQNRAVFSMKE 863 Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 88/469 (18%), Positives = 166/469 (35%), Gaps = 57/469 (12%) Query: 10 EESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ-----GELEIQV 64 E E G +V V + + + K + A + + Sbjct: 1096 ESEPTTSELAVGQVVEAEVTKAGQTQLQLRLPEKRSGRVLATEVLDENDTSAQPFKAYHK 1155 Query: 65 GDEVDVALDAVEDGFGETLLSREKAKRHEAWITL-----------------EKAYEDAET 107 GD++ V + D + + +A E + Sbjct: 1156 GDKIQVRILGFRDQKTRRFMPITQKFLKRHVAECSLKPSVLAAKELPPMLEREAVEVGQE 1215 Query: 108 VTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNV 166 GV++ + V L +R + +LV++ K+ I + K + Sbjct: 1216 RWGVVSEVGERCLWVLLAPNVRGRI--NLVNLGAAATDPKALKKQFG---IGMRHKFRII 1270 Query: 167 VVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAW 225 ++S + + S + + G V +K + + + LG G G + ITD+ Sbjct: 1271 IMSEKLLELELASESSQE----IHVGSVVSASLKRIVNRFGIMHLGHGRFGAVDITDVDD 1326 Query: 226 KRVKHPSEIVNVGDEITVKVLKFD---------RERTRVSLGLK------QLGEDPWVAI 270 K P + ++ V+ + + L L+ V Sbjct: 1327 KLHAEPFKTLDRSKVYRAVVIGGENLAATGNMGSAIGDIRLSLRPSEVEGDAATKASVLR 1386 Query: 271 AKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEV 330 + G V N TD G FV + V V ++ + K VG +V+ Sbjct: 1387 MEDVDTDQVHRGVVCNATDEGVFVALSRNVTARVQIANLSDLF-VRDIKKAFKVGTLVQG 1445 Query: 331 MVLDIDEERRRISLGLKQCKANPWQQ---FAETHNKGDRVEGKIKSITDFGIFIGLDG-- 385 ++ + R+ + LK+ +P +T +G V G IK + +G+FI +D Sbjct: 1446 RIMA--KTDGRLEMSLKKSDVDPSGTTLLRIDTLEQGQHVTGVIKRVESYGVFIVIDDSA 1503 Query: 386 GIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVK 434 + G+ H+S+ + + E+ + Y GD + AVVL+VD +++RISLG+K Sbjct: 1504 NLTGMAHISECA-DQRIEDLNKLYSAGDAVKAVVLKVDVDKKRISLGIK 1551 Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 97/559 (17%), Positives = 190/559 (33%), Gaps = 81/559 (14%) Query: 13 LKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA---QGELEIQVGDEVD 69 L G +V+G V+++ ++++ ++ +P+E + E + + GD+V Sbjct: 511 LAAESIEVGLLVQGSVLSLIPSGMVIELASGIQARVPSEHLADVMLTHPEKKFKAGDKVK 570 Query: 70 VALDAVEDGFG---ETLLSREKAKRHEAWITLEKAYED--AETVTGVINGKVKGGFTVEL 124 + + E G ++ +K ++ ++ G I+ + G V Sbjct: 571 GRVLSNEKLKGSKHRIKVTLKKTLVRSDLPIIKNMHDAQPGMRTHGCISKVMDKGCIVSF 630 Query: 125 NG----IRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 + A LP + +E V+ D + N+++++ RA S Sbjct: 631 YNQARRLSA-LPLFQNNAILANRGCKFM--VVECGVLNCDPQENSLILTFRAAKTSVADR 687 Query: 181 -ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDM-AWKRVKHPS------ 232 RD L+ ++ G V + + V V+ L T++ A HPS Sbjct: 688 GARDAQLKRIEAGSLEAVEVVAVAEDMLTVKF--VESPLVQTELRAGHLTDHPSLATALC 745 Query: 233 EIVNVGDEITVKVLKFDRERTRVSLGLK-----QLGEDPWVAIAKRYPEGTKLTGRVTNL 287 GD++ VL+ + RV++ K Q + G + ++ Sbjct: 746 RTYKKGDKLEAVVLE--KRGRRVTISCKPQLKAQTKVESLPKELDDLKLGQVFPAYIRSV 803 Query: 288 TDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLK 347 DYGCF+ G+ GLV + ++ +P + V V V +I++E+ R +K Sbjct: 804 LDYGCFIGTIHGLSGLVPLRQLA-KRYVDNPKAFFHPDQTVLVAVSEINKEQNRAVFSMK 862 Query: 348 Q-----------------------CKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLD 384 + + + A ++ G + I+ I FG+ Sbjct: 863 EDVIGAVAVVPYMQSLAKDMARFAGIKDSPGRRAAPYHHGQAISVLIQEIKPFGVVGTTK 922 Query: 385 GGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNW 444 G+ V + E + G E+ VL +D E+ + + +K ++ Sbjct: 923 DGVPIFV--------TKEQRQGIECEVGVELPGRVLDIDYEKGVLDVTLKPELVSASSDN 974 Query: 445 VALNKKG---------------AIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVE 489 +K G V G+V V A V + Y ++ DR E Sbjct: 975 GKDSKTGKGKRSHPTKLPFAKKEEVQGRVELVKVTHAVVSGPERTLLYCP-TQTYNDRRE 1033 Query: 490 DATLVLSVGDEVEAKFTGV 508 G + V Sbjct: 1034 -PFKRFVAGSKATVTVLSV 1051 Score = 126 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 83/455 (18%), Positives = 156/455 (34%), Gaps = 39/455 (8%) Query: 101 AYEDAETVTGVINGKVKGGFTVE--LNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIK 158 A+ + + G+ V+ ++G + FLP + + +L E F V Sbjct: 234 AHCQGRLLPACVQSVEDHGYVVDLGIDGAQGFLPTKAAKLHVKQLGRNLVPGEPLFCVTT 293 Query: 159 ---LDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVD 215 R V + + + + + ++ L+ G++V+G V+ + G + GG Sbjct: 294 GTTAGSTRVVQVSINISKLRTAELSTNEAVMSTLRPGLQVRGKVQQVHAKGLVLQSGGFS 353 Query: 216 GLLHITDMAWKRVKH--PSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKR 273 +H + ++ VG +T +V+ D + L+Q Sbjct: 354 IGIHHVHFDQLPTEKKTTEQLYTVGQTLTARVIFIDLANKVILASLRQPHL-QIDDCTLP 412 Query: 274 YPEGTKLTGRVTNLTD--YGCFV---------------EIEEGVEGLVHVSEMDWTNKNI 316 P GT+L D +G E V G H+S + + Sbjct: 413 LPIGTRLPSCHVRFVDQAFGVLAAGQPAPGHARGVPAEEDTPEVLGFAHISRLLEEHVET 472 Query: 317 HPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITD 376 P K G E V+ S AE+ G V+G + S+ Sbjct: 473 VP-KSFRRGTAHEGRVVAQQPFDGIYSFSFAPKDLKVPFLAAESIEVGLLVQGSVLSLIP 531 Query: 377 FGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL---QVDAERERISLGV 433 G+ I L GI V S+ +V +++K GD++ VL ++ + RI + + Sbjct: 532 SGMVIELASGIQARVP-SEHLADVMLTHPEKKFKAGDKVKGRVLSNEKLKGSKHRIKVTL 590 Query: 434 KQL---AEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGY--LRASEASRDRV 488 K+ ++ P + + G G ++ V KG V + L + + + Sbjct: 591 KKTLVRSDLPIIKNMHDAQPGMRTHGCISKVMDKGCIVSFYNQARRLSALPLFQ-NNAIL 649 Query: 489 EDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKD 523 + V VE D + ++ L+ RA Sbjct: 650 ANRGCKFMV---VECGVLNCDPQENSLILTFRAAK 681 Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 97/569 (17%), Positives = 188/569 (33%), Gaps = 66/569 (11%) Query: 21 GSIVRGVVVAIDKDVVLVDAGL-KSESAIPAEQFKNAQGEL--EIQVGDEVDVALDAVED 77 G ++ V +++ +VD G+ ++ +P + K +L + G+ + Sbjct: 238 GRLLPACVQSVEDHGYVVDLGIDGAQGFLPTKAAKLHVKQLGRNLVPGEPLFCVTTGTTA 297 Query: 78 GFGETL-----LSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLP 132 G + +S+ + + V G + G ++ G + Sbjct: 298 GSTRVVQVSINISKLRTAELSTNEAVMSTLRPGLQVRGKVQQVHAKGLVLQSGGFS--IG 355 Query: 133 GSLVDV------RPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLL 186 V + + L+ G+ L +VI +D ++ S R + Sbjct: 356 IHHVHFDQLPTEKKTTEQLYTVGQTLTARVIFIDLANKVILASLRQPHLQIDDCTLP--- 412 Query: 187 ENLQEGMEV-KGIVKNL-TDYGAFV----------------DLGGVDGLLHITDMAWKRV 228 L G + V+ + +G D V G HI+ + + V Sbjct: 413 --LPIGTRLPSCHVRFVDQAFGVLAAGQPAPGHARGVPAEEDTPEVLGFAHISRLLEEHV 470 Query: 229 KHPSEIVNVGDEITVKVLKFDRERTRVSLGL--KQLGEDPWVAIAKRYPEGTKLTGRVTN 286 + + G +V+ S K L P++ A+ G + G V + Sbjct: 471 ETVPKSFRRGTAHEGRVVAQQPFDGIYSFSFAPKDLKV-PFL-AAESIEVGLLVQGSVLS 528 Query: 287 LTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLD---IDEERRRIS 343 L G +E+ G++ V SE HP K GD V+ VL + + RI Sbjct: 529 LIPSGMVIELASGIQARVP-SEHLADVMLTHPEKKFKAGDKVKGRVLSNEKLKGSKHRIK 587 Query: 344 LGLKQCKAN---PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNV 400 + LK+ P + G R G I + D G + L L N Sbjct: 588 VTLKKTLVRSDLPIIKNMHDAQPGMRTHGCISKVMDKGCIVSFYNQARRLSALPLFQNNA 647 Query: 401 AGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAED-----PFNNWVALNKKGAIVT 455 ++ + VL D + + L + + + + G++ Sbjct: 648 ILANRGCKFMV---VECGVLNCDPQENSLILTFRAAKTSVADRGARDAQLKRIEAGSLEA 704 Query: 456 GKVTAVDAKGATVELADG--VEGYLRASEASRDRV--EDATLVLSVGDEVEAKFTGVDRK 511 +V AV TV+ + V+ LRA + GD++EA ++ Sbjct: 705 VEVVAVAEDMLTVKFVESPLVQTELRAGHLTDHPSLATALCRTYKKGDKLEAVVLE--KR 762 Query: 512 NRAISLSVRAKDEADEKDAIATVNKQEDA 540 R +++S + + +A K + ++ K+ D Sbjct: 763 GRRVTISCKPQLKAQTK--VESLPKELDD 789 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 85/509 (16%), Positives = 181/509 (35%), Gaps = 71/509 (13%) Query: 71 ALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL-NGIRA 129 + A + G S ++ E + E V G + + G +EL +GI+A Sbjct: 486 RVVAQQPFDGIYSFSFAPKDLKVPFLAAE-SIEVGLLVQGSVLSLIPSGMVIELASGIQA 544 Query: 130 FLPGSLV-DVRPVRDTLHLE-GKELEFKVI---KLDQKRNNVVVSRRAVIESENSAERDQ 184 +P + DV + G +++ +V+ KL ++ + V+ + + + + Sbjct: 545 RVPSEHLADVMLTHPEKKFKAGDKVKGRVLSNEKLKGSKHRIKVTLKKTL-VRSDLPIIK 603 Query: 185 LLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIV-NVGDE--- 240 + + Q GM G + + D G V ++ + + I+ N G + Sbjct: 604 NMHDAQPGMRTHGCISKVMDKGCIVSFYNQ-----ARRLSALPLFQNNAILANRGCKFMV 658 Query: 241 ITVKVLKFDRERTRVSLGLKQLGED-----PWVAIAKRYPEGTKLTGRVTNLTDYGCFVE 295 + VL D + + L + A KR G+ V + + V+ Sbjct: 659 VECGVLNCDPQENSLILTFRAAKTSVADRGARDAQLKRIEAGSLEAVEVVAVAEDMLTVK 718 Query: 296 IEEGVEGLVHVSEMDWTNKNIHPS------KVVNVGDVVEVMVLDIDEERRRISLGLK-- 347 VE + +E+ + HPS + GD +E +VL+ + RR+++ K Sbjct: 719 F---VESPLVQTELRAGHLTDHPSLATALCRTYKKGDKLEAVVLE--KRGRRVTISCKPQ 773 Query: 348 ---QCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEE 404 Q K + + G I+S+ D+G FIG G+ GLV L ++ + Sbjct: 774 LKAQTKVESLPKELDDLKLGQVFPAYIRSVLDYGCFIGTIHGLSGLVPLRQLA-KRYVDN 832 Query: 405 AVREYKKGDEIAAVVLQVDAERERISLGVKQ------------------------LAEDP 440 + + V +++ E+ R +K+ + + P Sbjct: 833 PKAFFHPDQTVLVAVSEINKEQNRAVFSMKEDVIGAVAVVPYMQSLAKDMARFAGIKDSP 892 Query: 441 FNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDE 500 + G ++ + + G DGV ++ + + + VG E Sbjct: 893 GRRAAPYHH-GQAISVLIQEIKPFGVVGTTKDGVPIFV-------TKEQRQGIECEVGVE 944 Query: 501 VEAKFTGVDRKNRAISLSVRAKDEADEKD 529 + + +D + + ++++ + + D Sbjct: 945 LPGRVLDIDYEKGVLDVTLKPELVSASSD 973 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 55/283 (19%), Positives = 112/283 (39%), Gaps = 26/283 (9%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL 60 M+E +L S E GS+V + I ++ G A+ + Sbjct: 1272 MSEKLLELELASESSQEIHVGSVVSASLKRIVNRFGIMHLGHGRFGAVDITDVDDKLHAE 1331 Query: 61 EIQVGDEVDVA---LDAVED---------GFGETLLSRE--KAKRHEAWITLEKAYED-- 104 + D V + E+ G+ LS + + A ED Sbjct: 1332 PFKTLDRSKVYRAVVIGGENLAATGNMGSAIGDIRLSLRPSEVEGDAATKASVLRMEDVD 1391 Query: 105 -AETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRPVRDTLH--LEGKELEFKVIKLD 160 + GV+ G V L+ + A + + + VRD G ++ ++ + Sbjct: 1392 TDQVHRGVVCNATDEGVFVALSRNVTARVQIANLSDLFVRDIKKAFKVGTLVQGRI--MA 1449 Query: 161 QKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG---GVDGL 217 + + +S + + + ++ L++G V G++K + YG F+ + + G+ Sbjct: 1450 KTDGRLEMSLKKSDVDPSGTTLLR-IDTLEQGQHVTGVIKRVESYGVFIVIDDSANLTGM 1508 Query: 218 LHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLK 260 HI++ A +R++ +++ + GD + VLK D ++ R+SLG+K Sbjct: 1509 AHISECADQRIEDLNKLYSAGDAVKAVVLKVDVDKKRISLGIK 1551 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 65/387 (16%), Positives = 129/387 (33%), Gaps = 51/387 (13%) Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKH--PSEIV 235 E + L G V+ V + L G + T++ + P + Sbjct: 1094 KQESEPTTSELAVGQVVEAEVTKAGQTQLQLRLPEKRSGRVLATEVLDENDTSAQPFKAY 1153 Query: 236 NVGDEITVKVLKFDRERTR--------------VSLGLK----QLGEDPWVAIAKRYPEG 277 + GD+I V++L F ++TR LK E P + + G Sbjct: 1154 HKGDKIQVRILGFRDQKTRRFMPITQKFLKRHVAECSLKPSVLAAKELPPMLEREAVEVG 1213 Query: 278 TKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHP-SKVVNVGDVVEVMVLDID 336 + G V+ + + +V + V G +++ + + K +G + + Sbjct: 1214 QERWGVVSEVGERCLWVLLAPNVRGRINLVNLGAAATDPKALKKQFGIGMRHKFRI---- 1269 Query: 337 EERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITD-FGIFIGLDGGIDGLVHLSD 395 I + K + + ++ + G V +K I + FGI L G G V ++D Sbjct: 1270 -----IIMSEKLLELELASESSQEIHVGSVVSASLKRIVNRFGIM-HLGHGRFGAVDITD 1323 Query: 396 ISWNVAGEEAVREYKKGDEIAAVVLQVD-----------AERERISLGVKQLAEDPFNNW 444 + + E + + AVV+ + R+SL ++ D Sbjct: 1324 VD-DKLHAEPFKTLDRSKVYRAVVIGGENLAATGNMGSAIGDIRLSLRPSEVEGDAATKA 1382 Query: 445 ----VALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDE 500 + + G V +G V L+ V ++ + S V D VG Sbjct: 1383 SVLRMEDVDTDQVHRGVVCNATDEGVFVALSRNVTARVQIANLSDLFVRDIKKAFKVGTL 1442 Query: 501 VEAKFTGVDRKNRAISLSVRAKDEADE 527 V+ + + + + +S++ D Sbjct: 1443 VQGRIMA--KTDGRLEMSLKKSDVDPS 1467 Score = 61.5 bits (148), Expect = 9e-08, Method: Composition-based stats. Identities = 68/443 (15%), Positives = 130/443 (29%), Gaps = 119/443 (26%) Query: 187 ENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPS------------- 232 + + G + G VK++ D+ + L G+ G L ++D++ V + Sbjct: 76 KRIVVGQLLMGCVKSVADFAVQISLPHGLQGTLQLSDVSPHYVAYLRGKAADAEDAEAAS 135 Query: 233 --------------------------------EIVNVGDEITVKVLKFDRERTRVSL--- 257 + +VG ++ V +E R+ L Sbjct: 136 ASEDEESEQEQEQEQQANQSSQASDEIVVSMSRLFHVGQQLVCAVKA--KEDKRLLLTTD 193 Query: 258 --------------------------GLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYG 291 L + W +G L V ++ D+G Sbjct: 194 PRLIHANLDVDDILQKAHRSQTPQLLSLTLMDSRHWSPPCAHC-QGRLLPACVQSVEDHG 252 Query: 292 CFVEIE-EGVEGL-------VHVSEMDWTNKNIHPSKVVNVGDVV---EVMVLDIDEERR 340 V++ +G +G +HV ++ P V G V+ + I+ + Sbjct: 253 YVVDLGIDGAQGFLPTKAAKLHVKQLGRNLVPGEPLFCVTTGTTAGSTRVVQVSINISK- 311 Query: 341 RISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNV 400 L+ + + + T G +V GK++ + G+ + G G+ H+ Sbjct: 312 -----LRTAELSTNEAVMSTLRPGLQVRGKVQQVHAKGLVLQSGGFSIGIHHVHFDQLPT 366 Query: 401 AGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQ--------LAEDP------------ 440 + + Y G + A V+ +D + I ++Q P Sbjct: 367 EKKTTEQLYTVGQTLTARVIFIDLANKVILASLRQPHLQIDDCTLPLPIGTRLPSCHVRF 426 Query: 441 FNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDE 500 + + G G V A+ E V G+ S + VE G Sbjct: 427 VDQAFGVLAAGQPAPGHARGVPAE----EDTPEVLGFAHISRLLEEHVETVPKSFRRGTA 482 Query: 501 VEAKFTGVDRKNRAISLSVRAKD 523 E + + S S KD Sbjct: 483 HEGRVVAQQPFDGIYSFSFAPKD 505 >UniRef50_C1NA95 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1NA95_9CHLO Length = 2229 Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats. Identities = 110/606 (18%), Positives = 190/606 (31%), Gaps = 107/606 (17%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQG------------ 58 + PG +V V A+ D + V+ + I A + +G Sbjct: 335 DYTSMQSLLPGMLVNARVRAVLSDGISVNFMTYFTATIDAFHLGDGKGTDGKHLNGPTPD 394 Query: 59 -ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYED------------- 104 +VGD + V+ L+ ++++ + + Sbjct: 395 VSKTHKVGDRCRARVLFVDADAKRIGLTLRPHLVSPQAVSVQPSSTETGGDPLSHLNLPK 454 Query: 105 -AETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHL---------------- 147 + I +V V L LP S P D + Sbjct: 455 PGTSYDAAIVRRVDANVGVLLE-----LPPSGAAAAPTDDESRMGKQSYSPPKGACLGYV 509 Query: 148 ------------------EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENL 189 G + +VI R V A + + L+ L Sbjct: 510 HISDATDDHIERLEKKFKVGATVRARVI----GRRVVDGVATASCKKTVVEQPFLSLDEL 565 Query: 190 QEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKF 248 GM+VKG V + YGA + L GV LL ++ + + V G + +VL Sbjct: 566 TPGMKVKGEVVAVEPYGAVIKLAPGVKALLPPHHVSDIPGRTTNAKVCPGARLNFRVLSV 625 Query: 249 DRERTRVSLGLKQLGEDPWVAIAKRYPE-----GTKLTGRVTNLTDYGCFVEIEEGVEGL 303 D R+R ++ K+ + + + + G G VT + YG FV + + GL Sbjct: 626 DVARSRATVTRKKTILNSDLDVIATMEDATRAGGATTHGVVTGVEPYGVFVSLYGALRGL 685 Query: 304 VHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLG-----------LKQCKAN 352 ++ P++ VG V V+ D ++ L L + Sbjct: 686 AGAQDLGLA-PGQTPTEAFQVGQCVRARVIRADNGPGKLKLSLAPGGSGDGVVLHDDEGG 744 Query: 353 PWQQFAETHNKGDRVEGK------IKSI-TDFG-IFIGLDGGIDGLVHLSDISWNVAGEE 404 + G G +K + D G + + L GG+ G++ + +S + Sbjct: 745 GGGGGGRLDDVGAPPPGTIIESAVVKRVDADTGNVLVTLPGGVPGVITAAHVSDHPVTGA 804 Query: 405 AVREYKKGDEIAAVVLQVDAERERISLGVK-----QLAEDPFNNWVALNKKGAIVTGKVT 459 A+ D+ ++ ++A+ R L K D VA GA G V Sbjct: 805 ALVATYAPDDAIGPLVALEAKPRRSILSRKTSLVTAARSDALPASVADVVVGASYPGYVA 864 Query: 460 A-VDAKGATVELADGVEGYLRASEA---SRDRVEDATLVLSVGDEVEAKFTGVD--RKNR 513 + G V + G S+ +R D + G V A+ T VD Sbjct: 865 SATQNAGVFVRFLGRLTGLAPPSQLVPGARGGDADPEECFAPGQSVRARVTAVDATVDPP 924 Query: 514 AISLSV 519 +SLS+ Sbjct: 925 RLSLSL 930 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 74/328 (22%), Positives = 136/328 (41%), Gaps = 51/328 (15%) Query: 148 EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYG- 206 G+ +E V + V R+A++ + +R ++ G ++ GIV + +G Sbjct: 1399 VGETIEGGVAMVAGD----VARRKAIVTLRAAKKR-----DVVAGAKLGGIVTKVLSHGG 1449 Query: 207 -AFVDLGG-VDGLLHITDMAW-----KRVKHPSEIVNVGDEITVKVLKFDRERTRVSLG- 258 FV L G G +H+TD++ + P + GD + V+VL+ D + + L Sbjct: 1450 GVFVQLNGRQRGRVHVTDLSDAPGSAESQGEPWKKYAPGDAVDVRVLRVDEDDGEIDLST 1509 Query: 259 ----LKQLGEDPWVAIA----KRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMD 310 +K+ + +A + GTK+ G V T GCFV + V+ V + + Sbjct: 1510 RASDMKRARTGRYDKLAIETCDQLTPGTKVAGFVKQCTKGGCFVALGRTVDARVKLCNLS 1569 Query: 311 WTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQ-------QFAETHNK 363 + P K G +V VL +D E R+ + L+ + + ++ Sbjct: 1570 NEFVD-DPPKAFPKGALVTGTVLSVDAENERVEITLRADGGDGGGAAAVNAPPTGDAPDE 1628 Query: 364 GDRVEGKIKSITDFGIFIGLD--GGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAV--- 418 G + G ++ + +G+F+ LD GG GL H+S + + + G+ + Sbjct: 1629 GAVLMGTVRRVQTYGVFVTLDDCGGRSGLCHISAFADARIDDGLDAHVRAGERVRVKGAF 1688 Query: 419 ------------VLQVDAERERISLGVK 434 VL+V+ + RISLG+K Sbjct: 1689 YLTLVPIRPRWRVLKVEVDTGRISLGMK 1716 Score = 138 bits (347), Expect = 8e-31, Method: Composition-based stats. Identities = 97/581 (16%), Positives = 186/581 (32%), Gaps = 123/581 (21%) Query: 21 GSIVRGVVVAIDKDVVLVDAGLKSE--SAIPAEQFKNAQGELEIQVGDEVDVALDA---- 74 G+ V V ++ +++ G+ +P + + A+ + G +DV ++A Sbjct: 233 GAAVPACVTGVEAHGFVLNFGIDDAPIGFLPRKSVR-AEMASSLARGAILDVVINASAGP 291 Query: 75 ------------VEDGFGETLLSR--------EKAKRHEAWITLEKAYED---AETVTGV 111 E SR ++ + + + V Sbjct: 292 GGDGGNGEDGGGKEKKRALVTNSRVVQCTADAKRVSSAVTRESDYTSMQSLLPGMLVNAR 351 Query: 112 INGKVKGGFTVELNG-----IRAFLPGSLVDVRPVRDTLHL------------EGKELEF 154 + + G +V I AF + D HL G Sbjct: 352 VRAVLSDGISVNFMTYFTATIDAF----HLGDGKGTDGKHLNGPTPDVSKTHKVGDRCRA 407 Query: 155 KVIKLDQKRNNVVVSRRAVIESENSAERDQL-----------LENLQEGMEVKG-IVKNL 202 +V+ +D + ++ R + S + L + G IV+ + Sbjct: 408 RVLFVDADAKRIGLTLRPHLVSPQAVSVQPSSTETGGDPLSHLNLPKPGTSYDAAIVRRV 467 Query: 203 -TDYGAFVDL-------------------------GGVDGLLHITDMAWKRVKHPSEIVN 236 + G ++L G G +HI+D ++ + Sbjct: 468 DANVGVLLELPPSGAAAAPTDDESRMGKQSYSPPKGACLGYVHISDATDDHIERLEKKFK 527 Query: 237 VGDEITVKVLKFDRERTRVSLGLKQ-LGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVE 295 VG + +V+ + K+ + E P++++ + P G K+ G V + YG ++ Sbjct: 528 VGATVRARVIGRRVVDGVATASCKKTVVEQPFLSLDELTP-GMKVKGEVVAVEPYGAVIK 586 Query: 296 IEEGVEGLV---HVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN 352 + GV+ L+ HVS++ N V G + VL +D R R ++ K+ N Sbjct: 587 LAPGVKALLPPHHVSDIPGRTTNAK----VCPGARLNFRVLSVDVARSRATVTRKKTILN 642 Query: 353 PWQQFAETHNK-----GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVR 407 T G G + + +G+F+ L G + GL D+ G+ Sbjct: 643 SDLDVIATMEDATRAGGATTHGVVTGVEPYGVFVSLYGALRGLAGAQDLGL-APGQTPTE 701 Query: 408 EYKKGDEIAAVVLQVDAERERISLGVKQ--------LAEDPFN--------NWVALNKKG 451 ++ G + A V++ D ++ L + L +D + V G Sbjct: 702 AFQVGQCVRARVIRADNGPGKLKLSLAPGGSGDGVVLHDDEGGGGGGGGRLDDVGAPPPG 761 Query: 452 AIVTGKVTAVDA---KGATVELADGVEGYLRASEASRDRVE 489 I+ V V L GV G + A+ S V Sbjct: 762 TIIESAVVKRVDADTGNVLVTLPGGVPGVITAAHVSDHPVT 802 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 67/290 (23%), Positives = 106/290 (36%), Gaps = 43/290 (14%) Query: 14 KEIETRPGSIVRGVVVAIDKDV--VLVDAGLKSESAIPAEQFKNAQGE--------LEIQ 63 K+ + G+ + G+V + V V + + +A G + Sbjct: 1427 KKRDVVAGAKLGGIVTKVLSHGGGVFVQLNGRQRGRVHVTDLSDAPGSAESQGEPWKKYA 1486 Query: 64 VGDEVDVALDAVEDGFGETLLSREKAKRHEAWI--TLEKAYED------AETVTGVINGK 115 GD VDV + V++ GE LS + A + A E V G + Sbjct: 1487 PGDAVDVRVLRVDEDDGEIDLSTRASDMKRARTGRYDKLAIETCDQLTPGTKVAGFVKQC 1546 Query: 116 VKGGFTVELN-GIRAFLPGSLVDVRPVRDTLH--LEGKELEFKVIKLDQKRNNVVVSRRA 172 KGG V L + A + + V D +G + V+ +D + V ++ RA Sbjct: 1547 TKGGCFVALGRTVDARVKLCNLSNEFVDDPPKAFPKGALVTGTVLSVDAENERVEITLRA 1606 Query: 173 VIESENSAERDQ---LLENLQEGMEVKGIVKNLTDYGAFV---DLGGVDGLLHITDMAWK 226 A + EG + G V+ + YG FV D GG GL HI+ A Sbjct: 1607 DGGDGGGAAAVNAPPTGDAPDEGAVLMGTVRRVQTYGVFVTLDDCGGRSGLCHISAFADA 1666 Query: 227 RVKHPSE-IVNVGDEITVK---------------VLKFDRERTRVSLGLK 260 R+ + V G+ + VK VLK + + R+SLG+K Sbjct: 1667 RIDDGLDAHVRAGERVRVKGAFYLTLVPIRPRWRVLKVEVDTGRISLGMK 1716 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 52/246 (21%), Positives = 94/246 (38%), Gaps = 26/246 (10%) Query: 294 VEIEEGVEGLVHVSEMDWTNKNIH--PSKVVNVGDVVEVMVLDI--DEERRRISLGLKQC 349 V + GV + E + + ++ VG+ +E V + D RR+ + L+ Sbjct: 1367 VSLAPGVTCRIPRVETGDSASVLKRPLTERFAVGETIEGGVAMVAGDVARRKAIVTLRAA 1426 Query: 350 KANPWQQFAETHNKGDRVEGKIKSITD--FGIFIGLDGGIDGLVHLSDISWN----VAGE 403 K G ++ G + + G+F+ L+G G VH++D+S + Sbjct: 1427 K-------KRDVVAGAKLGGIVTKVLSHGGGVFVQLNGRQRGRVHVTDLSDAPGSAESQG 1479 Query: 404 EAVREYKKGDEIAAVVLQVDAERERISLG-----VKQLAEDPFNNWV----ALNKKGAIV 454 E ++Y GD + VL+VD + I L +K+ ++ G V Sbjct: 1480 EPWKKYAPGDAVDVRVLRVDEDDGEIDLSTRASDMKRARTGRYDKLAIETCDQLTPGTKV 1539 Query: 455 TGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRA 514 G V G V L V+ ++ S + V+D G V VD +N Sbjct: 1540 AGFVKQCTKGGCFVALGRTVDARVKLCNLSNEFVDDPPKAFPKGALVTGTVLSVDAENER 1599 Query: 515 ISLSVR 520 + +++R Sbjct: 1600 VEITLR 1605 Score = 90.4 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 67/354 (18%), Positives = 119/354 (33%), Gaps = 59/354 (16%) Query: 244 KVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGL 303 +V++ + RVS + + + G + RV + G V Sbjct: 315 RVVQCTADAKRVS---SAVTRESDYTSMQSLLPGMLVNARVRAVLSDGISVNFMTYFTAT 371 Query: 304 VHVSEMDWTN---------KNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPW 354 + + SK VGD VL +D + +RI L L+ +P Sbjct: 372 IDAFHLGDGKGTDGKHLNGPTPDVSKTHKVGDRCRARVLFVDADAKRIGLTLRPHLVSPQ 431 Query: 355 Q---QFAETHNKGDRVE-------------GKIKSI-TDFGIFIGLDGG----------- 386 Q + T GD + ++ + + G+ + L Sbjct: 432 AVSVQPSSTETGGDPLSHLNLPKPGTSYDAAIVRRVDANVGVLLELPPSGAAAAPTDDES 491 Query: 387 -------------IDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGV 433 G VH+SD + + E +++K G + A V+ + Sbjct: 492 RMGKQSYSPPKGACLGYVHISD-ATDDHIERLEKKFKVGATVRARVIGRRVVDGVATASC 550 Query: 434 KQ-LAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDAT 492 K+ + E PF + + G V G+V AV+ GA ++LA GV+ L S Sbjct: 551 KKTVVEQPFLS-LDELTPGMKVKGEVVAVEPYGAVIKLAPGVKALLPPHHVSDIPGRTTN 609 Query: 493 LVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNA 546 + G + + VD +++ + + D IAT+ EDA + A Sbjct: 610 AKVCPGARLNFRVLSVDVARSRATVTRKKTILNSDLDVIATM---EDATRAGGA 660 Score = 72.7 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 32/154 (20%), Positives = 56/154 (36%), Gaps = 18/154 (11%) Query: 381 IGLDGGIDGLVHLSDI--SWNVAGEEAVREYKKGDEIAAVVLQV--DAERERISLGVKQL 436 + L G+ + + S +V + G+ I V V D R + + ++ Sbjct: 1367 VSLAPGVTCRIPRVETGDSASVLKRPLTERFAVGETIEGGVAMVAGDVARRKAIVTLRAA 1426 Query: 437 AEDPFNNWVALNKKGAIVTGKVTAVDA--KGATVELADGVEGYLRASEASR-----DRVE 489 + GA + G VT V + G V+L G + ++ S + Sbjct: 1427 KK-------RDVVAGAKLGGIVTKVLSHGGGVFVQLNGRQRGRVHVTDLSDAPGSAESQG 1479 Query: 490 DATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKD 523 + + GD V+ + VD + I LS RA D Sbjct: 1480 EPWKKYAPGDAVDVRVLRVDEDDGEIDLSTRASD 1513 >UniRef50_A8J2S3 RNA binding protein n=1 Tax=Chlamydomonas reinhardtii RepID=A8J2S3_CHLRE Length = 360 Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats. Identities = 56/188 (29%), Positives = 99/188 (52%), Gaps = 15/188 (7%) Query: 87 EKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVR---- 142 +A EA+I + E ETV I G+ +GG V+ +R F+P + +D +R Sbjct: 73 SQAAISEAYIKAASSKERGETVEVKIVGQNEGGVMVQFGPLRGFMPYNKLDPARLRACAN 132 Query: 143 -DTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKN 201 D L G++++ ++I D ++R+ ++ SE + L + EG ++G+V Sbjct: 133 GDLTKLIGQQIKARIITAD-------IARKELVLSERQVAAAEALGRVSEGDVIEGVVTG 185 Query: 202 LTDYGAFVDLGGVD---GLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLG 258 + DYGAF+ + G+ GL+H +++ W R+ E++ +G E+ KVL D R++L Sbjct: 186 VEDYGAFIQIKGLPDVFGLVHKSEVTWARILTVDEVLKLGQEVRAKVLSVDVANCRLALS 245 Query: 259 LKQLGEDP 266 +KQL DP Sbjct: 246 IKQLTTDP 253 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 45/218 (20%), Positives = 91/218 (41%), Gaps = 13/218 (5%) Query: 348 QCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVR 407 + + + A + +G+ VE KI + G+ + + G + + + A Sbjct: 75 AAISEAYIKAASSKERGETVEVKIVGQNEGGVMVQFGP-LRGFMPYNKLDPARLRACANG 133 Query: 408 EYKK--GDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKG 465 + K G +I A ++ D R+ + L +Q+A + +G ++ G VT V+ G Sbjct: 134 DLTKLIGQQIKARIITADIARKELVLSERQVAA---AEALGRVSEGDVIEGVVTGVEDYG 190 Query: 466 ATVELA--DGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKD 523 A +++ V G + SE + R+ VL +G EV AK VD N ++LS++ Sbjct: 191 AFIQIKGLPDVFGLVHKSEVTWARILTVDEVLKLGQEVRAKVLSVDVANCRLALSIKQLT 250 Query: 524 EADEKDAIATVNKQEDA-----NFSNNAMAEAFKAAKG 556 + ++ ++ + A+ E+ + G Sbjct: 251 TDPLRMSLDGLDWESADVSAVSEPELKALVESLAKSPG 288 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 13/171 (7%) Query: 190 QEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVK-----HPSEIVNVGDEITVK 244 + G V+ + + G V G + G + + R++ +++ +G +I + Sbjct: 89 ERGETVEVKIVGQNEGGVMVQFGPLRGFMPYNKLDPARLRACANGDLTKL--IGQQIKAR 146 Query: 245 VLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE--EGVEG 302 ++ D R + L +Q+ R EG + G VT + DYG F++I+ V G Sbjct: 147 IITADIARKELVLSERQVAA---AEALGRVSEGDVIEGVVTGVEDYGAFIQIKGLPDVFG 203 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP 353 LVH SE+ W + + +V+ +G V VL +D R++L +KQ +P Sbjct: 204 LVHKSEVTWA-RILTVDEVLKLGQEVRAKVLSVDVANCRLALSIKQLTTDP 253 Score = 68.1 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 35/192 (18%), Positives = 73/192 (38%), Gaps = 17/192 (8%) Query: 6 AQLFEESLKEIETRP-GSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQ------FKNAQG 58 A + E +K ++ G V +V ++ V+V G +P + A G Sbjct: 75 AAISEAYIKAASSKERGETVEVKIVGQNEGGVMVQFG-PLRGFMPYNKLDPARLRACANG 133 Query: 59 ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 +L +G ++ + + E +LS + EA + + + + GV+ G Sbjct: 134 DLTKLIGQQIKARIITADIARKELVLSERQVAAAEALGRV----SEGDVIEGVVTGVEDY 189 Query: 119 GFTVELNG---IRAFLPGSLVDVRPVR--DTLHLEGKELEFKVIKLDQKRNNVVVSRRAV 173 G +++ G + + S V + D + G+E+ KV+ +D + +S + + Sbjct: 190 GAFIQIKGLPDVFGLVHKSEVTWARILTVDEVLKLGQEVRAKVLSVDVANCRLALSIKQL 249 Query: 174 IESENSAERDQL 185 D L Sbjct: 250 TTDPLRMSLDGL 261 >UniRef50_C0DB62 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0DB62_9CLOT Length = 259 Score = 152 bits (383), Expect = 5e-35, Method: Composition-based stats. Identities = 61/206 (29%), Positives = 101/206 (49%), Gaps = 4/206 (1%) Query: 81 ETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRP 140 +S +++ E W + E+ + I VK G ++ +RAF+P S + Sbjct: 45 NIEISEDESGVLEKWAHFTQMLEERTVFSVKIAEAVKAGVVAYVDDVRAFIPASQLSTEY 104 Query: 141 VRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVK 200 V +GK ++ VI D ++ +V+S R V + AER + L + G V+G V Sbjct: 105 VEKLEDWQGKNIDVIVITADTEKKRLVLSGREVEKERKEAERKEKLAQFKAGDVVEGTVD 164 Query: 201 NLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGL 259 +L +YGAF+ L GVDGLLH++ ++ +R+KHP ++ G + VK+L ++SL + Sbjct: 165 SLKNYGAFIKLADGVDGLLHVSQISTQRIKHPGVVLKEGQSVKVKILSV--ADGKISLSM 222 Query: 260 KQLGEDPWVAIAKRYPEGTKLTGRVT 285 K L P + K T VT Sbjct: 223 KALTA-PVEDEEQHERFDYKETASVT 247 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 44/183 (24%), Positives = 82/183 (44%), Gaps = 10/183 (5%) Query: 352 NPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKK 411 W F + + KI G+ + + + S +S + + +++ Sbjct: 57 EKWAHFTQMLEERTVFSVKIAEAVKAGV-VAYVDDVRAFIPASQLSTEYVEK--LEDWQ- 112 Query: 412 GDEIAAVVLQVDAERERISLGVKQLAED----PFNNWVALNKKGAIVTGKVTAVDAKGAT 467 G I +V+ D E++R+ L +++ ++ +A K G +V G V ++ GA Sbjct: 113 GKNIDVIVITADTEKKRLVLSGREVEKERKEAERKEKLAQFKAGDVVEGTVDSLKNYGAF 172 Query: 468 VELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADE 527 ++LADGV+G L S+ S R++ +VL G V+ K V + ISLS++A E Sbjct: 173 IKLADGVDGLLHVSQISTQRIKHPGVVLKEGQSVKVKILSV--ADGKISLSMKALTAPVE 230 Query: 528 KDA 530 + Sbjct: 231 DEE 233 Score = 95.4 bits (236), Expect = 6e-18, Method: Composition-based stats. Identities = 40/176 (22%), Positives = 80/176 (45%), Gaps = 9/176 (5%) Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGD 239 + + L+E + G + V + + ++ + V+ + G Sbjct: 57 EKWAHFTQMLEERTVFSVKIAEAVKAGVVAYVDDVRAFIPASQLSTEYVEKLEDW--QGK 114 Query: 240 EITVKVLKFDRERTRVSLGLKQLGEDPWV----AIAKRYPEGTKLTGRVTNLTDYGCFVE 295 I V V+ D E+ R+ L +++ ++ ++ G + G V +L +YG F++ Sbjct: 115 NIDVIVITADTEKKRLVLSGREVEKERKEAERKEKLAQFKAGDVVEGTVDSLKNYGAFIK 174 Query: 296 IEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKA 351 + +GV+GL+HVS++ T + HP V+ G V+V +L + +ISL +K A Sbjct: 175 LADGVDGLLHVSQIS-TQRIKHPGVVLKEGQSVKVKILSV--ADGKISLSMKALTA 227 Score = 92.3 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 11/175 (6%) Query: 267 WVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGD 326 W + E T + ++ G +++ V + S++ T G Sbjct: 59 WAHFTQMLEERTVFSVKIAEAVKAGVVAYVDD-VRAFIPASQLS-TEYVEKLEDW--QGK 114 Query: 327 VVEVMVLDIDEERRRISLGLKQCKANPWQQFAE----THNKGDRVEGKIKSITDFGIFIG 382 ++V+V+ D E++R+ L ++ + + + GD VEG + S+ ++G FI Sbjct: 115 NIDVIVITADTEKKRLVLSGREVEKERKEAERKEKLAQFKAGDVVEGTVDSLKNYGAFIK 174 Query: 383 LDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLA 437 L G+DGL+H+S IS + K+G + +L V +ISL +K L Sbjct: 175 LADGVDGLLHVSQISTQRI-KHPGVVLKEGQSVKVKILSV--ADGKISLSMKALT 226 Score = 52.3 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 33/190 (17%), Positives = 69/190 (36%), Gaps = 19/190 (10%) Query: 5 FAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQ- 63 F Q+ EE + V+ VVA DV + IPA Q E Sbjct: 62 FTQMLEER-TVFSVKIAEAVKAGVVAYVDDV---------RAFIPASQLSTEYVEKLEDW 111 Query: 64 VGDEVDVALDAVEDGFGETLLSREKAKRHEA---WITLEKAYEDAETVTGVING-KVKGG 119 G +DV + + +LS + ++ ++ + V G ++ K G Sbjct: 112 QGKNIDVIVITADTEKKRLVLSGREVEKERKEAERKEKLAQFKAGDVVEGTVDSLKNYGA 171 Query: 120 FTVELNGIRAFLPGSLVDVRPVRDTLHLE--GKELEFKVIKLDQKRNNVVVSRRAVIESE 177 F +G+ L S + + ++ + G+ ++ K++ + + +S +A+ Sbjct: 172 FIKLADGVDGLLHVSQISTQRIKHPGVVLKEGQSVKVKILSV--ADGKISLSMKALTAPV 229 Query: 178 NSAERDQLLE 187 E+ + + Sbjct: 230 EDEEQHERFD 239 >UniRef50_UPI0001925B6E PREDICTED: similar to predicted protein, partial n=1 Tax=Hydra magnipapillata RepID=UPI0001925B6E Length = 375 Score = 151 bits (382), Expect = 6e-35, Method: Composition-based stats. Identities = 58/319 (18%), Positives = 129/319 (40%), Gaps = 11/319 (3%) Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 GF + AF+ V + ++ + +E +++E ++I +D + V+ ++ Sbjct: 29 GFGLIFGSFDAFVDKRHVPL--DKEIVLIEHEKVEARIIHIDPNTKKIGVT---LLPELI 83 Query: 179 SAERDQLLENLQEGMEVKG-IVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVN 236 ++ L + G ++ +V++ + G ++ + G +HI+ R + Sbjct: 84 KFPKNILSNHHSVGEVLECQVVRSDSSSGLYMKMSENTYGYVHISQTNDNRTTKLGKTFK 143 Query: 237 VGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI 296 +G +VL F + +L +K+ + + G ++G + L D+GC V+I Sbjct: 144 IGTTHKCRVLGFSAMDSAYTLTMKKSILEKQFLSYEDLKPGMLISGTIVTLEDFGCIVKI 203 Query: 297 EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQ 356 + ++ L + N HP K G + VL R + + K+ N Sbjct: 204 TDNIKALCPRLHLADIN-LKHPEKKFVEGKKLHFRVLRCKPSERSLVVTHKKTLVNSMFP 262 Query: 357 FAETHN--KGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDE 414 ++N G G + ++ FG+F+ + L+ S+ S G + G Sbjct: 263 IVSSYNVDVGTVAHGFVTAVKSFGVFVAFYNNVKALLPKSE-SRLAQGATVETNFYIGQV 321 Query: 415 IAAVVLQVDAERERISLGV 433 + V+ VD+ E++ + + Sbjct: 322 LQCTVISVDSSAEKMVVSL 340 Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats. Identities = 57/344 (16%), Positives = 129/344 (37%), Gaps = 11/344 (3%) Query: 181 ERDQLLENLQEGMEVK-GIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGD 239 ++ +L G V K + G + G D + + + ++ + Sbjct: 3 QKSAQFTSLMPGHLVDFKTEKKSENMGFGLIFGSFDAFVDKRHVPLDK----EIVLIEHE 58 Query: 240 EITVKVLKFDRERTRVSLGL-KQLGEDPWVAIAKRYPEGTKLTGRVTNL-TDYGCFVEIE 297 ++ +++ D ++ + L +L + P ++ + G L +V + G ++++ Sbjct: 59 KVEARIIHIDPNTKKIGVTLLPELIKFPKNILSNHHSVGEVLECQVVRSDSSSGLYMKMS 118 Query: 298 EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQF 357 E G VH+S+ N+ K +G + VL +L +K+ Sbjct: 119 ENTYGYVHISQ-TNDNRTTKLGKTFKIGTTHKCRVLGFSAMDSAYTLTMKKSILEKQFLS 177 Query: 358 AETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAA 417 E G + G I ++ DFG + + I L ++ ++ + +++ +G ++ Sbjct: 178 YEDLKPGMLISGTIVTLEDFGCIVKITDNIKALCPRLHLA-DINLKHPEKKFVEGKKLHF 236 Query: 418 VVLQVDAERERISLGVKQLAEDPFNNWVALNKK--GAIVTGKVTAVDAKGATVELADGVE 475 VL+ + + K+ + V+ G + G VTAV + G V + V+ Sbjct: 237 RVLRCKPSERSLVVTHKKTLVNSMFPIVSSYNVDVGTVAHGFVTAVKSFGVFVAFYNNVK 296 Query: 476 GYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSV 519 L SE+ + +G ++ VD + +S+ Sbjct: 297 ALLPKSESRLAQGATVETNFYIGQVLQCTVISVDSSAEKMVVSL 340 Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 63/169 (37%), Gaps = 7/169 (4%) Query: 8 LFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ---GELEIQV 64 L ++ L + +PG ++ G +V ++ +V ++ P + E + Sbjct: 171 LEKQFLSYEDLKPGMLISGTIVTLEDFGCIVKITDNIKALCPRLHLADINLKHPEKKFVE 230 Query: 65 GDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYED-AETVTGVINGKVKGGFTVE 123 G ++ + + +++ +K + + + D G + G V Sbjct: 231 GKKLHFRVLRCKPSERSLVVTHKKTLVNSMFPIVSSYNVDVGTVAHGFVTAVKSFGVFVA 290 Query: 124 L-NGIRAFLPGSLVDVRPVR--DTLHLEGKELEFKVIKLDQKRNNVVVS 169 N ++A LP S + +T G+ L+ VI +D +VVS Sbjct: 291 FYNNVKALLPKSESRLAQGATVETNFYIGQVLQCTVISVDSSAEKMVVS 339 Score = 58.0 bits (139), Expect = 9e-07, Method: Composition-based stats. Identities = 18/112 (16%), Positives = 53/112 (47%), Gaps = 2/112 (1%) Query: 411 KGDEIAAVVLQVDAERERISLGV-KQLAEDPFNNWVALNKKGAIVTGKVTAVDAK-GATV 468 + +++ A ++ +D ++I + + +L + P N + G ++ +V D+ G + Sbjct: 56 EHEKVEARIIHIDPNTKKIGVTLLPELIKFPKNILSNHHSVGEVLECQVVRSDSSSGLYM 115 Query: 469 ELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 ++++ GY+ S+ + +R +G + + G + A +L+++ Sbjct: 116 KMSENTYGYVHISQTNDNRTTKLGKTFKIGTTHKCRVLGFSAMDSAYTLTMK 167 >UniRef50_B6TZ31 RNA binding S1 n=4 Tax=Andropogoneae RepID=B6TZ31_MAIZE Length = 366 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 65/292 (22%), Positives = 121/292 (41%), Gaps = 34/292 (11%) Query: 93 EAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDV--------RPVRDT 144 W + + T + GG V N ++ F+P L+ RP++D Sbjct: 71 ADWESARACKDQGRIFTLPVLRANSGGLIVRFNSLQGFVPNPLLSPAHWCKDPKRPIQDV 130 Query: 145 LH-LEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLT 203 L G + KV +++++ +V S + S S+ ++ G GIV ++ Sbjct: 131 TKDLVGTSISVKVAEVNEEEKKLVFSEKDASWSTYSSR-------IKIGDIYDGIVGSVF 183 Query: 204 DYGAFVDL------GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSL 257 YGAFV L + GL+HI++++W V+ + +N GD + V V+ D ++R++L Sbjct: 184 HYGAFVHLRFPDGLYHLTGLVHISEVSWDLVQDVKDFLNEGDAVKVIVVNIDMTKSRIAL 243 Query: 258 GLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIH 317 ++QL EDP + + ++ VE+ G++G+ + E+ + Sbjct: 244 SIRQLEEDPLLETLDKVIPLKADQSPNRMISPSE--VELLPGLDGICN--ELLQEDGITD 299 Query: 318 PSKVVNVG-DVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVE 368 V G +E V+ D E + + Q K N + A + V Sbjct: 300 ----VQFGRQALEKRVVSQDLE---LWISNVQAKDNKFTLLARAGRQVQEVY 344 Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 60/277 (21%), Positives = 108/277 (38%), Gaps = 23/277 (8%) Query: 267 WVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVH---VSEMDWTNKNIHPSKVVN 323 W + +G T V G V ++G V +S W P + V Sbjct: 73 WESARACKDQGRIFTLPVLRANSGGLIVRF-NSLQGFVPNPLLSPAHWCKDPKRPIQDVT 131 Query: 324 V---GDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIF 380 G + V V +++EE +++ K W ++ GD +G + S+ +G F Sbjct: 132 KDLVGTSISVKVAEVNEEEKKLVFSEKDAS---WSTYSSRIKIGDIYDGIVGSVFHYGAF 188 Query: 381 IGLD-----GGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQ 435 + L + GLVH+S++SW++ + +GD + +V+ +D + RI+L ++Q Sbjct: 189 VHLRFPDGLYHLTGLVHISEVSWDLVQD-VKDFLNEGDAVKVIVVNIDMTKSRIALSIRQ 247 Query: 436 LAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEG----YLRASEASR-DRVED 490 L EDP + + VEL G++G L+ + Sbjct: 248 LEEDPLLETLDKVIPLKADQSPNRMISPSE--VELLPGLDGICNELLQEDGITDVQFGRQ 305 Query: 491 ATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADE 527 A V ++E + V K+ +L RA + E Sbjct: 306 ALEKRVVSQDLELWISNVQAKDNKFTLLARAGRQVQE 342 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 43/184 (23%), Positives = 76/184 (41%), Gaps = 15/184 (8%) Query: 362 NKGDRVEGKIKSITDFGIFIGLDGGIDGLVH---LSDISWNVAGEEAVREYKK---GDEI 415 ++G + G+ + + G V LS W + +++ K G I Sbjct: 81 DQGRIFTLPVLRANSGGLIVRF-NSLQGFVPNPLLSPAHWCKDPKRPIQDVTKDLVGTSI 139 Query: 416 AAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATV--ELADG 473 + V +V+ E +++ K + ++ + + K G I G V +V GA V DG Sbjct: 140 SVKVAEVNEEEKKLVFSEKDAS---WSTYSSRIKIGDIYDGIVGSVFHYGAFVHLRFPDG 196 Query: 474 V---EGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDA 530 + G + SE S D V+D L+ GD V+ +D I+LS+R +E + Sbjct: 197 LYHLTGLVHISEVSWDLVQDVKDFLNEGDAVKVIVVNIDMTKSRIALSIRQLEEDPLLET 256 Query: 531 IATV 534 + V Sbjct: 257 LDKV 260 >UniRef50_D1A3N7 RNA binding S1 domain protein n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1A3N7_THECD Length = 162 Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 63/163 (38%), Positives = 104/163 (63%), Gaps = 6/163 (3%) Query: 184 QLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITV 243 + L++ + GM V G V++L +GAFVDLGGV+GLL +++W+ +++PS++++VG E+TV Sbjct: 5 ERLKSYRAGMIVTGRVRSLERFGAFVDLGGVEGLLKTHNISWRPIEYPSDVLSVGKEVTV 64 Query: 244 KVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGL 303 K+L D +R ++SL LK L DP + + + G+ +TG+V + +G FV+IEEG GL Sbjct: 65 KILDVDLQRGQISLSLKDLQPDPMIPLKE--KVGSVVTGKVVKIVPFGIFVQIEEGQLGL 122 Query: 304 VHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGL 346 + SE P +G+ ++V + D+D + RRI L L Sbjct: 123 LMNSEFTGPGAPPRPE----IGEEIQVRIADVDLDSRRIRLSL 161 Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats. Identities = 50/161 (31%), Positives = 81/161 (50%), Gaps = 7/161 (4%) Query: 359 ETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAV 418 +++ G V G+++S+ FG F+ L GG++GL+ +ISW E G E+ Sbjct: 8 KSYRAGMIVTGRVRSLERFGAFVDL-GGVEGLLKTHNISW-RPIEYPSDVLSVGKEVTVK 65 Query: 419 VLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYL 478 +L VD +R +ISL +K L DP G++VTGKV + G V++ +G G L Sbjct: 66 ILDVDLQRGQISLSLKDLQPDPMIPLKEK--VGSVVTGKVVKIVPFGIFVQIEEGQLGLL 123 Query: 479 RASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSV 519 SE + +G+E++ + VD +R I LS+ Sbjct: 124 MNSEFTGPGAPPRPE---IGEEIQVRIADVDLDSRRIRLSL 161 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 57/162 (35%), Positives = 85/162 (52%), Gaps = 8/162 (4%) Query: 272 KRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVM 331 K Y G +TGRV +L +G FV++ GVEGL+ + W +PS V++VG V V Sbjct: 8 KSYRAGMIVTGRVRSLERFGAFVDLG-GVEGLLKTHNISW-RPIEYPSDVLSVGKEVTVK 65 Query: 332 VLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLV 391 +LD+D +R +ISL LK + +P E G V GK+ I FGIF+ ++ G GL+ Sbjct: 66 ILDVDLQRGQISLSLKDLQPDPMIPLKE--KVGSVVTGKVVKIVPFGIFVQIEEGQLGLL 123 Query: 392 HLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGV 433 S+ + A + G+EI + VD + RI L + Sbjct: 124 MNSEFTGPGAPPRP----EIGEEIQVRIADVDLDSRRIRLSL 161 Score = 86.9 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 12/163 (7%) Query: 100 KAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHL--EGKELEFKVI 157 K+Y VTG + + G V+L G+ L + RP+ + GKE+ K++ Sbjct: 8 KSYRAGMIVTGRVRSLERFGAFVDLGGVEGLLKTHNISWRPIEYPSDVLSVGKEVTVKIL 67 Query: 158 KLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDG 216 +D +R + +S + + ++ + G V G V + +G FV + G G Sbjct: 68 DVDLQRGQISLSLKDLQPDPMIPLKE------KVGSVVTGKVVKIVPFGIFVQIEEGQLG 121 Query: 217 LLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGL 259 LL ++ P +G+EI V++ D + R+ L L Sbjct: 122 LLMNSEFT-GPGAPPR--PEIGEEIQVRIADVDLDSRRIRLSL 161 Score = 75.4 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 1/82 (1%) Query: 445 VALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAK 504 + + G IVTG+V +++ GA V+L GVEG L+ S +E + VLSVG EV K Sbjct: 7 LKSYRAGMIVTGRVRSLERFGAFVDLG-GVEGLLKTHNISWRPIEYPSDVLSVGKEVTVK 65 Query: 505 FTGVDRKNRAISLSVRAKDEAD 526 VD + ISLS++ Sbjct: 66 ILDVDLQRGQISLSLKDLQPDP 87 Score = 63.1 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 34/156 (21%), Positives = 58/156 (37%), Gaps = 9/156 (5%) Query: 18 TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE---IQVGDEVDVALDA 74 R G IV G V ++++ VD G E + E + VG EV V + Sbjct: 10 YRAGMIVTGRVRSLERFGAFVDLGG-VEGLLKTHNISWRPIEYPSDVLSVGKEVTVKILD 68 Query: 75 VEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL-NGIRAFLPG 133 V+ G+ LS + + + + VTG + V G V++ G L Sbjct: 69 VDLQRGQISLSLKDLQPD---PMIPLKEKVGSVVTGKVVKIVPFGIFVQIEEGQLGLLMN 125 Query: 134 SLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVS 169 S P G+E++ ++ +D + +S Sbjct: 126 SEF-TGPGAPPRPEIGEEIQVRIADVDLDSRRIRLS 160 Score = 46.5 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 32/82 (39%) Query: 4 SFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQ 63 S L + + ++ + GS+V G VV I + V + +F + Sbjct: 79 SLKDLQPDPMIPLKEKVGSVVTGKVVKIVPFGIFVQIEEGQLGLLMNSEFTGPGAPPRPE 138 Query: 64 VGDEVDVALDAVEDGFGETLLS 85 +G+E+ V + V+ LS Sbjct: 139 IGEEIQVRIADVDLDSRRIRLS 160 >UniRef50_Q9LK47 Similarity to 30s ribosomal protein s1 n=5 Tax=Magnoliophyta RepID=Q9LK47_ARATH Length = 392 Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 54/228 (23%), Positives = 104/228 (45%), Gaps = 22/228 (9%) Query: 89 AKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLH-- 146 A W T + + +T G + G GG + + + FLP + Sbjct: 91 AAGPSDWKTAKAYCKSGDTFEGEVQGFNGGGLLIRFHSLVGFLPYPQLSPSRSCKEPQKS 150 Query: 147 -------LEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIV 199 L G +L KV++ D++ +++S + + + S +N+ G G V Sbjct: 151 IHEIAKTLVGSKLPVKVVQADEENRKLILSEKLALWPKYS-------QNVNVGDVFNGRV 203 Query: 200 KNLTDYGAFVDL------GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERT 253 ++ DYGAF+ L + GL+H+++++W V+ +++ GDE+ V V D+E++ Sbjct: 204 GSVEDYGAFIHLRFDDGLYHLTGLVHVSEVSWDYVQDVRDVLRDGDEVRVIVTNIDKEKS 263 Query: 254 RVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVE 301 R++L +KQL +DP + + TG + ++ G +E G+E Sbjct: 264 RITLSIKQLEDDPLLETLDKVILKDSSTGSPSLSSNNGDTIEPLPGLE 311 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 59/226 (26%), Positives = 97/226 (42%), Gaps = 16/226 (7%) Query: 261 QLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSK 320 G W G G V G + + G + ++ + P K Sbjct: 91 AAGPSDWKTAKAYCKSGDTFEGEVQGFNGGGLLIRF-HSLVGFLPYPQLSPSRSCKEPQK 149 Query: 321 VVNV------GDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSI 374 ++ G + V V+ DEE R++ L K W ++++ N GD G++ S+ Sbjct: 150 SIHEIAKTLVGSKLPVKVVQADEENRKLILSEKLAL---WPKYSQNVNVGDVFNGRVGSV 206 Query: 375 TDFGIFIGL--DGGI---DGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERI 429 D+G FI L D G+ GLVH+S++SW+ + + GDE+ +V +D E+ RI Sbjct: 207 EDYGAFIHLRFDDGLYHLTGLVHVSEVSWDYVQD-VRDVLRDGDEVRVIVTNIDKEKSRI 265 Query: 430 SLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVE 475 +L +KQL +DP + TG + G T+E G+E Sbjct: 266 TLSIKQLEDDPLLETLDKVILKDSSTGSPSLSSNNGDTIEPLPGLE 311 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 44/198 (22%), Positives = 83/198 (41%), Gaps = 15/198 (7%) Query: 348 QCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVR 407 + W+ GD EG+++ G+ I + G + +S + + +E + Sbjct: 91 AAGPSDWKTAKAYCKSGDTFEGEVQGFNGGGLLIRF-HSLVGFLPYPQLSPSRSCKEPQK 149 Query: 408 EYKK------GDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAV 461 + G ++ V+Q D E ++ L K + + G + G+V +V Sbjct: 150 SIHEIAKTLVGSKLPVKVVQADEENRKLILSEKLAL---WPKYSQNVNVGDVFNGRVGSV 206 Query: 462 DAKGATV--ELADGV---EGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAIS 516 + GA + DG+ G + SE S D V+D VL GDEV T +D++ I+ Sbjct: 207 EDYGAFIHLRFDDGLYHLTGLVHVSEVSWDYVQDVRDVLRDGDEVRVIVTNIDKEKSRIT 266 Query: 517 LSVRAKDEADEKDAIATV 534 LS++ ++ + + V Sbjct: 267 LSIKQLEDDPLLETLDKV 284 Score = 53.4 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 28/186 (15%), Positives = 65/186 (34%), Gaps = 23/186 (12%) Query: 19 RPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQ----------VGDEV 68 + G G V + +L+ +P Q ++ E Q VG ++ Sbjct: 105 KSGDTFEGEVQGFNGGGLLIRF-HSLVGFLPYPQLSPSRSCKEPQKSIHEIAKTLVGSKL 163 Query: 69 DVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN--- 125 V + ++ + +LS + A W + + G + G + L Sbjct: 164 PVKVVQADEENRKLILSEKLA----LWPKYSQNVNVGDVFNGRVGSVEDYGAFIHLRFDD 219 Query: 126 ---GIRAFLPGSLVDVRPVRDTLHLE--GKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 + + S V V+D + G E+ V +D++++ + +S + + + Sbjct: 220 GLYHLTGLVHVSEVSWDYVQDVRDVLRDGDEVRVIVTNIDKEKSRITLSIKQLEDDPLLE 279 Query: 181 ERDQLL 186 D+++ Sbjct: 280 TLDKVI 285 Score = 41.9 bits (97), Expect = 0.060, Method: Composition-based stats. Identities = 14/94 (14%), Positives = 30/94 (31%), Gaps = 8/94 (8%) Query: 15 EIETRPGSIVRGVVVAIDKDVVLV-----DAGLKSESAIPAEQFK---NAQGELEIQVGD 66 G + G V +++ + D + + ++ GD Sbjct: 190 SQNVNVGDVFNGRVGSVEDYGAFIHLRFDDGLYHLTGLVHVSEVSWDYVQDVRDVLRDGD 249 Query: 67 EVDVALDAVEDGFGETLLSREKAKRHEAWITLEK 100 EV V + ++ LS ++ + TL+K Sbjct: 250 EVRVIVTNIDKEKSRITLSIKQLEDDPLLETLDK 283 >UniRef50_A6NVV1 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NVV1_9BACE Length = 313 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 69/283 (24%), Positives = 112/283 (39%), Gaps = 23/283 (8%) Query: 70 VALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGV-INGKVKGGFTVELNGIR 128 V L + G L + E L +A E + G + + V L Sbjct: 2 VKLTTLFPPEGRLLHTEENQALCATKAGLIRAMEGRRVLEGKAVLCDAEHNLAVTLGPFT 61 Query: 129 AFLPGSLVDVRPVR------DTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 ++P + L GK + F V ++Q+ ++ R S + Sbjct: 62 GYIPREEAALGIAEGNTREIAILSRVGKPVAFTVEAVEQEEG--LLRPRLSRRSAQTMAL 119 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEI 241 + L++ L+ G + V +L +GAFVD+G GV ++ I ++ R+ HP VG EI Sbjct: 120 EHLMDTLEPGTVLPATVSHLEPFGAFVDIGCGVPSMISIERISVSRIPHPDRRFTVGQEI 179 Query: 242 TVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVE 301 ++ E RV L ++L W A R+ G + G V + DYG FVE+ + Sbjct: 180 YAVAMETCPELGRVILSHRELLGT-WQENAARFSAGMTVPGYVRGIKDYGIFVELSPNLS 238 Query: 302 GLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISL 344 GL P ++ GD V V + I +R +I L Sbjct: 239 GL------------AEPRGDLHEGDRVSVYIKAIFPDRMKIKL 269 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 44/229 (19%), Positives = 78/229 (34%), Gaps = 19/229 (8%) Query: 294 VEIEEGVEGLVHVSEMDWTNKNIHPSKVV---NVGDVVEVMVLDIDEERR--RISLGLKQ 348 V + G + E + ++ VG V V +++E R L + Sbjct: 55 VTLGP-FTGYIPREEAALGIAEGNTREIAILSRVGKPVAFTVEAVEQEEGLLRPRLSRRS 113 Query: 349 CKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVRE 408 + + +T G + + + FG F+ + G+ ++ + IS + R Sbjct: 114 AQTMALEHLMDTLEPGTVLPATVSHLEPFGAFVDIGCGVPSMISIERISVSRI-PHPDRR 172 Query: 409 YKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATV 468 + G EI AV ++ E R+ L ++L + A G V G V + G V Sbjct: 173 FTVGQEIYAVAMETCPELGRVILSHRELLGT-WQENAARFSAGMTVPGYVRGIKDYGIFV 231 Query: 469 ELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISL 517 EL+ + G + L GD V + I L Sbjct: 232 ELSPNLSGL-----------AEPRGDLHEGDRVSVYIKAIFPDRMKIKL 269 Score = 93.1 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 52/248 (20%), Positives = 92/248 (37%), Gaps = 30/248 (12%) Query: 23 IVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE-------LEIQVGDEVDVALDAV 75 ++ G V D + L IP E+ E + +VG V ++AV Sbjct: 39 VLEGKAVLCDAEHNLAVTLGPFTGYIPREEAALGIAEGNTREIAILSRVGKPVAFTVEAV 98 Query: 76 EDGFG--ETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFLP 132 E G LSR A+ A L E + ++ G V++ G+ + + Sbjct: 99 EQEEGLLRPRLSRRSAQTM-ALEHLMDTLEPGTVLPATVSHLEPFGAFVDIGCGVPSMIS 157 Query: 133 GSLVDVR--PVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQ 190 + V P D G+E+ ++ + V++S R ++ + Sbjct: 158 IERISVSRIPHPDRRFTVGQEIYAVAMETCPELGRVILSHRELLGTWQENA-----ARFS 212 Query: 191 EGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFD 249 GM V G V+ + DYG FV+L + GL P ++ GD ++V + Sbjct: 213 AGMTVPGYVRGIKDYGIFVELSPNLSGL-----------AEPRGDLHEGDRVSVYIKAIF 261 Query: 250 RERTRVSL 257 +R ++ L Sbjct: 262 PDRMKIKL 269 Score = 67.7 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 26/147 (17%), Positives = 51/147 (34%), Gaps = 6/147 (4%) Query: 381 IGLDGGIDGLVHLSDISWNVAGEEAVR---EYKKGDEIAAVVLQVDAERE--RISLGVKQ 435 + L G + + + +A + G +A V V+ E R L + Sbjct: 55 VTLGPF-TGYIPREEAALGIAEGNTREIAILSRVGKPVAFTVEAVEQEEGLLRPRLSRRS 113 Query: 436 LAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVL 495 + + + G ++ V+ ++ GA V++ GV + S R+ Sbjct: 114 AQTMALEHLMDTLEPGTVLPATVSHLEPFGAFVDIGCGVPSMISIERISVSRIPHPDRRF 173 Query: 496 SVGDEVEAKFTGVDRKNRAISLSVRAK 522 +VG E+ A + + LS R Sbjct: 174 TVGQEIYAVAMETCPELGRVILSHREL 200 Score = 59.2 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 32/154 (20%), Positives = 51/154 (33%), Gaps = 13/154 (8%) Query: 18 TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK---NAQGELEIQVGDEVDVALDA 74 PG+++ V ++ VD G S I E+ + VG E+ Sbjct: 126 LEPGTVLPATVSHLEPFGAFVDIGCGVPSMISIERISVSRIPHPDRRFTVGQEIYAVAME 185 Query: 75 VEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGS 134 G +LS + W + TV G + G G VEL+ P Sbjct: 186 TCPELGRVILSHREL--LGTWQENAARFSAGMTVPGYVRGIKDYGIFVELS------PN- 236 Query: 135 LVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVV 168 L + R LH EG + + + R + + Sbjct: 237 LSGLAEPRGDLH-EGDRVSVYIKAIFPDRMKIKL 269 >UniRef50_Q0D7X0 Os07g0203300 protein (Fragment) n=7 Tax=Magnoliophyta RepID=Q0D7X0_ORYSJ Length = 689 Score = 148 bits (375), Expect = 4e-34, Method: Composition-based stats. Identities = 64/305 (20%), Positives = 136/305 (44%), Gaps = 29/305 (9%) Query: 177 ENSAERDQLLENLQEGMEVKGIVKNLTD--YGAFVDLG-GVDGLLHITDMAWKRVKHPSE 233 E +E+ ++G + G ++ + G + +G + G +H T++ V+ P Sbjct: 25 ETQKPLSATVEHTKQGDIIGGRIQKILPGVGGLVIQIGPHLHGRVHYTEIVDSWVQEPIS 84 Query: 234 IVNVGDEITVKVLKFDRERT---RVSLGL-----------KQLGEDPWVAIAKRYP---- 275 + G + KVL R RV L L ++L +D + ++ Sbjct: 85 GFHEGQFVKCKVLDVSRSSEGSVRVDLSLRSSMCANSNQSRRLFDDSRIRTSRFEKINDL 144 Query: 276 -EGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLD 334 GT++ G V ++ GCF+ + +E + +S + +P VG +V VL Sbjct: 145 CPGTEVKGYVKSVNSKGCFIMVSRTIEARIILSNLSDEY-VENPQNDFPVGLLVHGRVLS 203 Query: 335 IDEERRRISLGLKQCKANPWQQFAE----THNKGDRVEGKIKSITDFGIFIGLDGG-IDG 389 + + ++ + L++ + Q+ + + GD + G++K + FG+F+ + G + Sbjct: 204 SEPQSGKVEVSLRKNTGSKSQKSDDISYSDLHVGDIIAGQVKRVESFGLFVTIQGSELVA 263 Query: 390 LVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNK 449 L H+S++S + +K GD++ A +L++D ER R+S+G+K+ P + + Sbjct: 264 LCHVSELSDEPVLD-IHSCHKAGDKVKAKILKIDEERHRVSIGMKKSYIGPDSTGDTSDD 322 Query: 450 KGAIV 454 + + Sbjct: 323 EDDEI 327 Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 60/314 (19%), Positives = 120/314 (38%), Gaps = 34/314 (10%) Query: 263 GEDPWVAIAKRYPEGTKLTGRVTNLTDY--GCFVEIEEGVEGLVHVSEM--DWTNKNIHP 318 + P A + +G + GR+ + G ++I + G VH +E+ W + P Sbjct: 26 TQKPLSATVEHTKQGDIIGGRIQKILPGVGGLVIQIGPHLHGRVHYTEIVDSWVQE---P 82 Query: 319 SKVVNVGDVVEVMVLDIDEERR---RISLGLKQCKANPWQQFAETHN------------- 362 + G V+ VLD+ R+ L L+ Q + Sbjct: 83 ISGFHEGQFVKCKVLDVSRSSEGSVRVDLSLRSSMCANSNQSRRLFDDSRIRTSRFEKIN 142 Query: 363 ---KGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVV 419 G V+G +KS+ G FI + I+ + LS++S E ++ G + V Sbjct: 143 DLCPGTEVKGYVKSVNSKGCFIMVSRTIEARIILSNLSDEYV-ENPQNDFPVGLLVHGRV 201 Query: 420 LQVDAERERISLGVKQ----LAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADG-V 474 L + + ++ + +++ ++ + + G I+ G+V V++ G V + + Sbjct: 202 LSSEPQSGKVEVSLRKNTGSKSQKSDDISYSDLHVGDIIAGQVKRVESFGLFVTIQGSEL 261 Query: 475 EGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATV 534 SE S + V D GD+V+AK +D + +S+ ++ D+ Sbjct: 262 VALCHVSELSDEPVLDIHSCHKAGDKVKAKILKIDEERHRVSIGMKKSYIGP--DSTGDT 319 Query: 535 NKQEDANFSNNAMA 548 + ED ++ Sbjct: 320 SDDEDDEIVPEEIS 333 Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats. Identities = 67/381 (17%), Positives = 127/381 (33%), Gaps = 35/381 (9%) Query: 12 SLKEIETRPGSIVRGVVVAI--DKDVVLVDAGLKSESAIPAEQFKNAQGELE---IQVGD 66 S T+ G I+ G + I +++ G + + ++ + G Sbjct: 31 SATVEHTKQGDIIGGRIQKILPGVGGLVIQIGPHLHGRVHYTEIVDSWVQEPISGFHEGQ 90 Query: 67 EVDVALDAVE---DGFGETLLSRE--------KAKRHEAWITLEKAYED-------AETV 108 V + V +G LS +++R + + + V Sbjct: 91 FVKCKVLDVSRSSEGSVRVDLSLRSSMCANSNQSRRLFDDSRIRTSRFEKINDLCPGTEV 150 Query: 109 TGVINGKV-KGGFTVELNGIRAFLPGSLVDVRPVRDT--LHLEGKELEFKVIKLDQKRNN 165 G + KG F + I A + S + V + G + +V+ + + Sbjct: 151 KGYVKSVNSKGCFIMVSRTIEARIILSNLSDEYVENPQNDFPVGLLVHGRVLSSEPQSGK 210 Query: 166 VVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVD--GLLHITDM 223 V VS R S++ D +L G + G VK + +G FV + G + L H++++ Sbjct: 211 VEVSLRKNTGSKSQKSDDISYSDLHVGDIIAGQVKRVESFGLFVTIQGSELVALCHVSEL 270 Query: 224 AWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQ------LGEDPWVAIAKRYPEG 277 + + V GD++ K+LK D ER RVS+G+K+ D Sbjct: 271 SDEPVLDIHSCHKAGDKVKAKILKIDEERHRVSIGMKKSYIGPDSTGDTSDDEDDEIVPE 330 Query: 278 TKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDE 337 V V + V ++ + N G + ++D+ Sbjct: 331 EISRNPVMGRDRNHALVLPKPESRASVLPLQVSLDESEGSDQENDNKGQEI-ANGTEVDD 389 Query: 338 ERRRISLGLKQCKANPWQQFA 358 ++ L K K + A Sbjct: 390 KKSNKRLKEKARKQRELEISA 410 Score = 44.6 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 42/265 (15%), Positives = 93/265 (35%), Gaps = 24/265 (9%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDA-GLKSESAIPAEQFKNAQGELE---IQVGD 66 + + + G I+ G V ++ + V G + + + + + GD Sbjct: 227 DDISYSDLHVGDIIAGQVKRVESFGLFVTIQGSELVALCHVSELSDEPVLDIHSCHKAGD 286 Query: 67 EVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGG------- 119 +V + +++ + +K+ ED E V I+ G Sbjct: 287 KVKAKILKIDEERHRVSIGMKKSYIGPDSTGDTSDDEDDEIVPEEISRNPVMGRDRNHAL 346 Query: 120 FTVELNGIRAFLP--GSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAV---- 173 + + LP SL + +G+E+ ++D K++N + +A Sbjct: 347 VLPKPESRASVLPLQVSLDESEGSDQENDNKGQEI-ANGTEVDDKKSNKRLKEKARKQRE 405 Query: 174 IESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSE 233 +E ER + Q E + +V++ + +FV + + LL + D+ R Sbjct: 406 LEISALEERALQRDIPQTPDEFEKLVRS-SPNSSFVWINYMAFLLDLADVDKARAVAERA 464 Query: 234 IVNVG-----DEITVKVLKFDRERT 253 + + +++ V V F+ E Sbjct: 465 LRTINIREEEEKLNVWVAYFNLENE 489 >UniRef50_A9SNI7 Predicted protein n=3 Tax=Embryophyta RepID=A9SNI7_PHYPA Length = 299 Score = 148 bits (375), Expect = 4e-34, Method: Composition-based stats. Identities = 55/193 (28%), Positives = 100/193 (51%), Gaps = 22/193 (11%) Query: 89 AKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDV-RPVRDT--- 144 +R+ AW ++ E GV++ GG V ++ FLP S +D R +RD+ Sbjct: 1 MQRNAAWQKAQETMESGSIHRGVVDACNSGGLVVLFGPLQGFLPFSQMDQGRLLRDSSRS 60 Query: 145 -----LHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIV 199 L G + K+I+ ++ ++ S + + N L L+EG+ +G V Sbjct: 61 LSEFAEELVGDFISVKIIEANETTRRLIFSEKQAVLEAN-------LRLLEEGLVYEGKV 113 Query: 200 KNLTDYGAFVDL------GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERT 253 ++TD+GAFVD+ V GL+ ++++W V++P +I +G + VK+L+ D+E++ Sbjct: 114 NSVTDFGAFVDVVLPDGTSSVRGLVRTSELSWNPVRNPRDICEIGQSVRVKILQLDKEKS 173 Query: 254 RVSLGLKQLGEDP 266 + L +KQL +DP Sbjct: 174 HLYLSIKQLQDDP 186 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 16/202 (7%) Query: 176 SENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRV-----KH 230 + +A + E ++ G +G+V G V G + G L + M R+ + Sbjct: 1 MQRNAAWQKAQETMESGSIHRGVVDACNSGGLVVLFGPLQGFLPFSQMDQGRLLRDSSRS 60 Query: 231 PSEIVN--VGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLT 288 SE VGD I+VK+++ + R+ KQ A + EG G+V ++T Sbjct: 61 LSEFAEELVGDFISVKIIEANETTRRLIFSEKQAV---LEANLRLLEEGLVYEGKVNSVT 117 Query: 289 DYGCFVE--IEEG---VEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRIS 343 D+G FV+ + +G V GLV SE+ W N +P + +G V V +L +D+E+ + Sbjct: 118 DFGAFVDVVLPDGTSSVRGLVRTSELSW-NPVRNPRDICEIGQSVRVKILQLDKEKSHLY 176 Query: 344 LGLKQCKANPWQQFAETHNKGD 365 L +KQ + +P + + Sbjct: 177 LSIKQLQDDPRLETPDKSMPVQ 198 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 43/199 (21%), Positives = 80/199 (40%), Gaps = 15/199 (7%) Query: 354 WQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKK-- 411 WQ+ ET G G + + G+ + L G + G + S + ++ R + Sbjct: 7 WQKAQETMESGSIHRGVVDACNSGGLVV-LFGPLQGFLPFSQMDQGRLLRDSSRSLSEFA 65 Query: 412 ----GDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGAT 467 GD I+ +++ + R+ KQ + L ++G + GKV +V GA Sbjct: 66 EELVGDFISVKIIEANETTRRLIFSEKQAV---LEANLRLLEEGLVYEGKVNSVTDFGAF 122 Query: 468 VE--LADG---VEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAK 522 V+ L DG V G +R SE S + V + + +G V K +D++ + LS++ Sbjct: 123 VDVVLPDGTSSVRGLVRTSELSWNPVRNPRDICEIGQSVRVKILQLDKEKSHLYLSIKQL 182 Query: 523 DEADEKDAIATVNKQEDAN 541 + + + Sbjct: 183 QDDPRLETPDKSMPVQSQE 201 Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 36/186 (19%), Positives = 76/186 (40%), Gaps = 23/186 (12%) Query: 19 RPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQF----------KNAQGELEIQVGDEV 68 GSI RGVV A + ++V G + +P Q ++ E VGD + Sbjct: 15 ESGSIHRGVVDACNSGGLVVLFG-PLQGFLPFSQMDQGRLLRDSSRSLSEFAEELVGDFI 73 Query: 69 DVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL---- 124 V + + + S ++A L E+ G +N G V++ Sbjct: 74 SVKIIEANETTRRLIFSEKQAVLEANLRLL----EEGLVYEGKVNSVTDFGAFVDVVLPD 129 Query: 125 --NGIRAFLPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 + +R + S + PVR+ + G+ + K+++LD++++++ +S + + + Sbjct: 130 GTSSVRGLVRTSELSWNPVRNPRDICEIGQSVRVKILQLDKEKSHLYLSIKQLQDDPRLE 189 Query: 181 ERDQLL 186 D+ + Sbjct: 190 TPDKSM 195 >UniRef50_D1J1D7 Whole genome shotgun sequence of line PN40024, scaffold_62.assembly12x (Fragment) n=4 Tax=rosids RepID=D1J1D7_VITVI Length = 390 Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats. Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 22/212 (10%) Query: 87 EKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLH 146 +A+R W E G I G GG V + FLP + H Sbjct: 87 RQARRSADWKAARAHLESGFIYEGRIEGFNGGGLLVRFYSLVGFLPFPQLSPSHSCKEPH 146 Query: 147 ---------LEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKG 197 L G + KVI D+++ ++ S + + + + G + Sbjct: 147 KTIQEIAKGLIGSLISVKVILADEEKRKLIFSEKEAAWL-------KFSKQINIGDIFEA 199 Query: 198 IVKNLTDYGAFVDL------GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRE 251 +V ++ DYGAFV L + GL+H+++++W V+ +++N GDE+ VK++K DR Sbjct: 200 MVGSVEDYGAFVHLRFPDGLYHLTGLVHVSEVSWDLVQDVRDVLNEGDEVRVKIVKVDRV 259 Query: 252 RTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGR 283 ++R++L +KQL EDP + + TG Sbjct: 260 KSRITLSIKQLEEDPLLETLDKVIPQDGSTGP 291 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 16/220 (7%) Query: 267 WVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNV-- 324 W A G GR+ G V + G + ++ ++ P K + Sbjct: 95 WKAARAHLESGFIYEGRIEGFNGGGLLVRFY-SLVGFLPFPQLSPSHSCKEPHKTIQEIA 153 Query: 325 ----GDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIF 380 G ++ V V+ DEE+R++ K+ W +F++ N GD E + S+ D+G F Sbjct: 154 KGLIGSLISVKVILADEEKRKLIFSEKEA---AWLKFSKQINIGDIFEAMVGSVEDYGAF 210 Query: 381 IGLD-----GGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQ 435 + L + GLVH+S++SW++ + +GDE+ +++VD + RI+L +KQ Sbjct: 211 VHLRFPDGLYHLTGLVHVSEVSWDLVQD-VRDVLNEGDEVRVKIVKVDRVKSRITLSIKQ 269 Query: 436 LAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVE 475 L EDP + TG + + +E G+E Sbjct: 270 LEEDPLLETLDKVIPQDGSTGPDSLRTSDSYDIEPLPGLE 309 Score = 121 bits (305), Expect = 5e-26, Method: Composition-based stats. Identities = 50/214 (23%), Positives = 92/214 (42%), Gaps = 17/214 (7%) Query: 346 LKQCKANP-WQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEE 404 ++Q + + W+ G EG+I+ G+ + + G + +S + + +E Sbjct: 86 IRQARRSADWKAARAHLESGFIYEGRIEGFNGGGLLVRF-YSLVGFLPFPQLSPSHSCKE 144 Query: 405 AVREYKK------GDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKV 458 + ++ G I+ V+ D E+ ++ K+ A + + G I V Sbjct: 145 PHKTIQEIAKGLIGSLISVKVILADEEKRKLIFSEKEAA---WLKFSKQINIGDIFEAMV 201 Query: 459 TAVDAKGATV--ELADGV---EGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNR 513 +V+ GA V DG+ G + SE S D V+D VL+ GDEV K VDR Sbjct: 202 GSVEDYGAFVHLRFPDGLYHLTGLVHVSEVSWDLVQDVRDVLNEGDEVRVKIVKVDRVKS 261 Query: 514 AISLSVRAKDEADEKDAIATVNKQEDANFSNNAM 547 I+LS++ +E + + V Q D + +++ Sbjct: 262 RITLSIKQLEEDPLLETLDKVIPQ-DGSTGPDSL 294 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 52/211 (24%), Positives = 93/211 (44%), Gaps = 16/211 (7%) Query: 172 AVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRV-KH 230 A+ ++ SA+ +L+ G +G ++ G V + G L ++ K Sbjct: 85 AIRQARRSADWKAARAHLESGFIYEGRIEGFNGGGLLVRFYSLVGFLPFPQLSPSHSCKE 144 Query: 231 PSEIVN------VGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRV 284 P + + +G I+VKV+ D E+ ++ K+ W+ +K+ G V Sbjct: 145 PHKTIQEIAKGLIGSLISVKVILADEEKRKLIFSEKEAA---WLKFSKQINIGDIFEAMV 201 Query: 285 TNLTDYGCFVEIE-----EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEER 339 ++ DYG FV + + GLVHVSE+ W + V+N GD V V ++ +D + Sbjct: 202 GSVEDYGAFVHLRFPDGLYHLTGLVHVSEVSW-DLVQDVRDVLNEGDEVRVKIVKVDRVK 260 Query: 340 RRISLGLKQCKANPWQQFAETHNKGDRVEGK 370 RI+L +KQ + +P + + D G Sbjct: 261 SRITLSIKQLEEDPLLETLDKVIPQDGSTGP 291 Score = 43.0 bits (100), Expect = 0.029, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 30/94 (31%), Gaps = 8/94 (8%) Query: 15 EIETRPGSIVRGVVVAIDKDVVLV-----DAGLKSESAIPAEQFK---NAQGELEIQVGD 66 + G I +V +++ V D + + + GD Sbjct: 188 SKQINIGDIFEAMVGSVEDYGAFVHLRFPDGLYHLTGLVHVSEVSWDLVQDVRDVLNEGD 247 Query: 67 EVDVALDAVEDGFGETLLSREKAKRHEAWITLEK 100 EV V + V+ LS ++ + TL+K Sbjct: 248 EVRVKIVKVDRVKSRITLSIKQLEEDPLLETLDK 281 >UniRef50_A7M5P8 Putative uncharacterized protein n=1 Tax=Bacteroides ovatus ATCC 8483 RepID=A7M5P8_BACOV Length = 1862 Score = 147 bits (372), Expect = 8e-34, Method: Composition-based stats. Identities = 75/362 (20%), Positives = 152/362 (41%), Gaps = 28/362 (7%) Query: 185 LLENLQEGMEVKGIVKNLTDY-GAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 N G ++ + ++ GAF + GVDGL+ + D++W ++ GD + Sbjct: 3 TYNNPSVGDIIRVKITSIKPDLGAFAKMPNGVDGLIRLHDISWSNQSVTLSSLSEGDVLD 62 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 VKV+K + +++L K L +P + +GT + ++ +G V + + Sbjct: 63 VKVIK-ELPDGKLNLSRKNLLPNP-----RTVEKGTIYKVIIKSVESFGLIVNLGDST-A 115 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLD--IDEERRR--ISLGLKQCKANPWQQFA 358 LVHVSE+ P+ G+ + +V+D D E+ R IS+ + + + Sbjct: 116 LVHVSEL--------PTIEYKEGEEITCVVIDNNYDPEKHRNKISMSVLALHDYFAKVHS 167 Query: 359 ETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAV 418 E +G IK+ I DG I +V L E + +E+ V Sbjct: 168 ENERVKCLFKGIIKNENSTSALIEADGLIKVIVPLKRFVEPYKTRLLNNEIETDEELEFV 227 Query: 419 VLQVDAERERISLGVKQLAEDPFNNWVA----LNKKGAIVTGKVTAVDAKGATVELAD-G 473 ++ + + + + L ++ + + V KG I+ V ++ K AT+++ + G Sbjct: 228 FIKYNEKLKDVVLDMRPIEAEEKKARVDWLRSQLNKGDIIDAIVKNINNKFATIDIGNTG 287 Query: 474 VEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIAT 533 + G + E S ++V A+ + G+ V + G N + S + E ++++ Sbjct: 288 ILGSIYRDELSPNKVIRASDEVFPGEHVRVAYMG--EDNGQLIFSRKFFVEDKYEESLYE 345 Query: 534 VN 535 ++ Sbjct: 346 LS 347 Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats. Identities = 61/352 (17%), Positives = 141/352 (40%), Gaps = 33/352 (9%) Query: 105 AETVTGVINGKVK--GGFTVELNGIRAFLPGSLVD--VRPVRDTLHLEGKELEFKVIKLD 160 + + I G F NG+ + + + V + EG L+ KVIK + Sbjct: 10 GDIIRVKITSIKPDLGAFAKMPNGVDGLIRLHDISWSNQSVTLSSLSEGDVLDVKVIK-E 68 Query: 161 QKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHI 220 + +SR+ ++ + +++G K I+K++ +G V+LG L+H+ Sbjct: 69 LPDGKLNLSRKNLLPNPR---------TVEKGTIYKVIIKSVESFGLIVNLGDSTALVHV 119 Query: 221 TDMAWKRVKHPSEIVNVGDEITVKVL--KFDRER--TRVSLGLKQLGEDPWVAIAKRYPE 276 +++ P+ G+EIT V+ +D E+ ++S+ + L + ++ Sbjct: 120 SEL-------PTIEYKEGEEITCVVIDNNYDPEKHRNKISMSVLALHDYFAKVHSENERV 172 Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDID 336 G + N +E + ++ +V + K + + + +E + + + Sbjct: 173 KCLFKGIIKNENSTSALIEADGLIKVIVPLKRFVEPYKTRLLNNEIETDEELEFVFIKYN 232 Query: 337 EERRRISLGLKQCKANPWQQFAE----THNKGDRVEGKIKSITDFGIFIGLDG-GIDGLV 391 E+ + + L ++ +A + + NKGD ++ +K+I + I + GI G + Sbjct: 233 EKLKDVVLDMRPIEAEEKKARVDWLRSQLNKGDIIDAIVKNINNKFATIDIGNTGILGSI 292 Query: 392 HLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNN 443 + ++S N + + G+ + + D ++ K ED + Sbjct: 293 YRDELSPNKVIRASDEVF-PGEHVRVAYMGED--NGQLIFSRKFFVEDKYEE 341 Score = 95.4 bits (236), Expect = 6e-18, Method: Composition-based stats. Identities = 53/261 (20%), Positives = 110/261 (42%), Gaps = 16/261 (6%) Query: 18 TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALD--AV 75 G+I + ++ +++ ++V+ G S + + + +E + G+E+ + Sbjct: 88 VEKGTIYKVIIKSVESFGLIVNLGD-STALVHVSEL----PTIEYKEGEEITCVVIDNNY 142 Query: 76 EDGFGETLLSREKAKRHEAWITLEKAYED-AETVTGVINGKVKGGFTVELNG-IRAFLP- 132 + +S H+ + + E G+I + +E +G I+ +P Sbjct: 143 DPEKHRNKISMSVLALHDYFAKVHSENERVKCLFKGIIKNENSTSALIEADGLIKVIVPL 202 Query: 133 GSLVDVRPVR--DTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQ 190 V+ R + +ELEF IK ++K +VV+ R + E A D L L Sbjct: 203 KRFVEPYKTRLLNNEIETDEELEFVFIKYNEKLKDVVLDMRPIEAEEKKARVDWLRSQLN 262 Query: 191 EGMEVKGIVKNLTDYGAFVDLG--GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKF 248 +G + IVKN+ + A +D+G G+ G ++ +++ +V S+ V G+ + V + Sbjct: 263 KGDIIDAIVKNINNKFATIDIGNTGILGSIYRDELSPNKVIRASDEVFPGEHVRVAYMGE 322 Query: 249 DRERTRVSLGLKQLGEDPWVA 269 D ++ K ED + Sbjct: 323 D--NGQLIFSRKFFVEDKYEE 341 Score = 50.0 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 2/88 (2%) Query: 450 KGAIVTGKVTAVDAK-GATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGV 508 G I+ K+T++ GA ++ +GV+G +R + S LS GD ++ K Sbjct: 9 VGDIIRVKITSIKPDLGAFAKMPNGVDGLIRLHDISWSNQSVTLSSLSEGDVLDVKVIK- 67 Query: 509 DRKNRAISLSVRAKDEADEKDAIATVNK 536 + + ++LS + T+ K Sbjct: 68 ELPDGKLNLSRKNLLPNPRTVEKGTIYK 95 >UniRef50_Q5ZC75 Os01g0589000 protein n=4 Tax=Poaceae RepID=Q5ZC75_ORYSJ Length = 438 Score = 147 bits (372), Expect = 9e-34, Method: Composition-based stats. Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 16/213 (7%) Query: 58 GELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVK 117 G + G V + G LLS + R AW + + E + I Sbjct: 162 GRTLVPPGTVVFAEVLG-RTLSGRPLLSARRLFRRLAWHRARQVMQLDEPIEVKIYEWNT 220 Query: 118 GGFTVELNGIRAFLPGSLVDVR--PVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIE 175 GG + G+RAFLP + R D + G + + +LD++ N++++S + E Sbjct: 221 GGLLTRIEGLRAFLPKFELMDRINTFTDLKNKVGCSIRVCITRLDEETNDLIISEKKAWE 280 Query: 176 SENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVD--GLLHITDMAWKRVKHPSE 233 + L+EG ++GIV + YGA V + G + GLLHI++++ RV S+ Sbjct: 281 ----------MTYLKEGTLLQGIVHKIFPYGAQVRIAGTNRSGLLHISNISRGRVLSVSD 330 Query: 234 IVNVGDEITVKVLKFDRERTRVSLGLKQLGEDP 266 I+ + +E+ V V+K + +++L + L P Sbjct: 331 ILKIDEEVKVLVVKSNV-PDKIALSISDLESTP 362 Score = 86.9 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 42/208 (20%), Positives = 82/208 (39%), Gaps = 12/208 (5%) Query: 321 VVNVGDVVEVMVLDIDEERRRISLGLKQC-KANPWQQFAETHNKGDRVEGKIKSITDFGI 379 +V G VV VL R L ++ + W + + + +E KI G+ Sbjct: 165 LVPPGTVVFAEVLGRTL-SGRPLLSARRLFRRLAWHRARQVMQLDEPIEVKIYEWNTGGL 223 Query: 380 FIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAED 439 ++ G+ + ++ + ++ K G I + ++D E + + K+ E Sbjct: 224 LTRIE-GLRAFLPKFELMDRINTFTDLKN-KVGCSIRVCITRLDEETNDLIISEKKAWE- 280 Query: 440 PFNNWVALNKKGAIVTGKVTAVDAKGATVELAD-GVEGYLRASEASRDRVEDATLVLSVG 498 + K+G ++ G V + GA V +A G L S SR RV + +L + Sbjct: 281 -----MTYLKEGTLLQGIVHKIFPYGAQVRIAGTNRSGLLHISNISRGRVLSVSDILKID 335 Query: 499 DEVEAKFTGVDRKNRAISLSVRAKDEAD 526 +EV+ + + I+LS+ + Sbjct: 336 EEVKVLVVKSNVPD-KIALSISDLESTP 362 >UniRef50_Q0DGF0 Os05g0535800 protein n=4 Tax=Poaceae RepID=Q0DGF0_ORYSJ Length = 592 Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats. Identities = 53/223 (23%), Positives = 102/223 (45%), Gaps = 19/223 (8%) Query: 64 VGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVE 123 VG V + G G LLS + R AW +++ + I GG Sbjct: 250 VGTVVFTEVLGRTLG-GRPLLSARRLFRRVAWHRIKQL---NVPIKVKIFEWNAGGLLTR 305 Query: 124 LNGIRAFLPGSLVDVRPVR--DTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 + G+RAFLP + RP D + G+++ + ++D+K N +++S + Sbjct: 306 IEGLRAFLPKPEMMTRPRNFTDLKNTVGQQIHVCITRIDEKANELIISEKEAW------- 358 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVD--GLLHITDMAWKRVKHPSEIVNVGD 239 + L+EG ++G V+ L YGA + +G + GLLH++++ ++ +++ VG+ Sbjct: 359 ---AMTYLREGTLLQGTVRKLFPYGAQITIGDTNRGGLLHVSNITRGQLTSVGDVLKVGE 415 Query: 240 EITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTG 282 E+ V+K R++L K L +P + ++ + +G Sbjct: 416 EVKAIVIK-STAPGRIALSTKDLESEPGLFLSNKEWDGEYTDV 457 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 31/188 (16%), Positives = 70/188 (37%), Gaps = 12/188 (6%) Query: 340 RRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWN 399 R L ++ + N ++ KI G+ ++ G+ + ++ Sbjct: 265 GRPLLSARRLFRRVAWHRIKQLNV--PIKVKIFEWNAGGLLTRIE-GLRAFLPKPEMMTR 321 Query: 400 VAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVT 459 ++ G +I + ++D + + + K+ + + ++G ++ G V Sbjct: 322 PRNFTDLKN-TVGQQIHVCITRIDEKANELIISEKEA----W--AMTYLREGTLLQGTVR 374 Query: 460 AVDAKGATVELAD-GVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLS 518 + GA + + D G L S +R ++ VL VG+EV+A I+LS Sbjct: 375 KLFPYGAQITIGDTNRGGLLHVSNITRGQLTSVGDVLKVGEEVKAIVIK-STAPGRIALS 433 Query: 519 VRAKDEAD 526 + + Sbjct: 434 TKDLESEP 441 Score = 81.2 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 41/189 (21%), Positives = 75/189 (39%), Gaps = 13/189 (6%) Query: 253 TRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWT 312 R L ++L VA + + ++ G IE G+ + EM Sbjct: 265 GRPLLSARRLFRR--VAWHRIKQLNVPIKVKIFEWNAGGLLTRIE-GLRAFLPKPEMMTR 321 Query: 313 NKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIK 372 +N K VG + V + IDE+ + + K+ A +G ++G ++ Sbjct: 322 PRNFTDLKN-TVGQQIHVCITRIDEKANELIISEKEAWA------MTYLREGTLLQGTVR 374 Query: 373 SITDFGIFIGLDGGID-GLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISL 431 + +G I + GL+H+S+I+ K G+E+ A+V++ RI+L Sbjct: 375 KLFPYGAQITIGDTNRGGLLHVSNITRGQL-TSVGDVLKVGEEVKAIVIK-STAPGRIAL 432 Query: 432 GVKQLAEDP 440 K L +P Sbjct: 433 STKDLESEP 441 Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 37/161 (22%), Positives = 63/161 (39%), Gaps = 9/161 (5%) Query: 206 GAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGED 265 G + G+ L +M + VG +I V + + D + + + K+ Sbjct: 301 GLLTRIEGLRAFLPKPEMMTRPRNFTDLKNTVGQQIHVCITRIDEKANELIISEKEA--- 357 Query: 266 PWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE-GVEGLVHVSEMDWTNKNIHPSKVVNV 324 W EGT L G V L YG + I + GL+HVS + + V+ V Sbjct: 358 -W--AMTYLREGTLLQGTVRKLFPYGAQITIGDTNRGGLLHVSNIT-RGQLTSVGDVLKV 413 Query: 325 GDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGD 365 G+ V+ +V+ RI+L K ++ P + G+ Sbjct: 414 GEEVKAIVIK-STAPGRIALSTKDLESEPGLFLSNKEWDGE 453 >UniRef50_UPI0001925B6F PREDICTED: similar to predicted protein n=2 Tax=Hydra magnipapillata RepID=UPI0001925B6F Length = 783 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 82/384 (21%), Positives = 149/384 (38%), Gaps = 46/384 (11%) Query: 187 ENLQEGMEVKGIVKNLTDYGAFVDL--GGVDGLLHITDMAW--KRVKHPSEIVNVGDEIT 242 N G V +VK + V L G ++G +HI+++ ++ K P + + Sbjct: 350 SNPALGSLVSAVVKGIKPAQLSVTLMNGRLNGRIHISNIHDTIEQGKSPLKAFKPLQVVE 409 Query: 243 VKVLKF--------------DRERTRVSLGLKQL----GEDPWVAIAKRYPEGTKLTGRV 284 KV+ F + R+ V L LK E ++ G + G V Sbjct: 410 AKVIGFRDLRTHNYLPISHTNISRSMVELSLKPSVLTSQETETEKKINQFSIGEVVNGFV 469 Query: 285 TNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSK-VVNVGDVVEVMVLDIDEERRRIS 343 ++T ++ + V+G V V + +++ K V VG +L E+ Sbjct: 470 ASVTKKSLWISVNPLVKGKVSVLNISENIMDLNKWKSVFKVGLGYSFRILSCKED----F 525 Query: 344 LGLKQCKANPWQQFAETHNKGDRVEGKIKSI-TDFGIFIGLDGGIDGLVHLSDISWNVAG 402 L L + + KG + GKI + + G+ I L G G+ H++++S + Sbjct: 526 LELTRLGED------LNVAKGVVINGKISKVLKNAGLLIELSNGKAGVAHITELSDHFE- 578 Query: 403 EEAVREYKKGDEIAAVVLQVDAERERISLGVKQ-------LAEDPFNNWVALNK---KGA 452 E + + + VL + + + I L ++Q ++ ++ +G Sbjct: 579 ESPLNGFAVDQFVRCKVLAI-KKNDEIDLSLRQSRINEGQANAGEWDRYINGYDDIKEGD 637 Query: 453 IVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKN 512 I+ G V + G V L+ + G ++ S+ V+D + VG V+AK +D Sbjct: 638 ILRGYVKSCSKIGVFVSLSQTINGRVQIKNLSQYFVKDFESLFHVGKLVKAKVIHIDPTT 697 Query: 513 RAISLSVRAKDEADEKDAIATVNK 536 I LS+R KD D A K Sbjct: 698 NHIDLSLRGKDVNDVDPAPPPKRK 721 Score = 85.0 bits (209), Expect = 7e-15, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 101/254 (39%), Gaps = 16/254 (6%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVE 76 + G +V G V ++ K + + + + +L ++ V Sbjct: 458 QFSIGEVVNGFVASVTKKSLWISVNPLVKGKVSVLNISENIMDLNKWK------SVFKVG 511 Query: 77 DGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVK-GGFTVEL-NGIRAFLPGS 134 G+ +LS ++ + + + G I+ +K G +EL NG + Sbjct: 512 LGYSFRILSCKEDFLELTRLGEDLNVAKGVVINGKISKVLKNAGLLIELSNGKAGVAHIT 571 Query: 135 LVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRAVIES--ENSAERDQLL---E 187 + L+ + + KV+ + + + R++ I N+ E D+ + + Sbjct: 572 ELSDHFEESPLNGFAVDQFVRCKVLAIKKNDEIDLSLRQSRINEGQANAGEWDRYINGYD 631 Query: 188 NLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVL 246 +++EG ++G VK+ + G FV L ++G + I +++ VK + +VG + KV+ Sbjct: 632 DIKEGDILRGYVKSCSKIGVFVSLSQTINGRVQIKNLSQYFVKDFESLFHVGKLVKAKVI 691 Query: 247 KFDRERTRVSLGLK 260 D + L L+ Sbjct: 692 HIDPTTNHIDLSLR 705 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q1IHI9 SSU ribosomal protein S1P n=6 Tax=Bacteria RepID... 527 e-148 UniRef50_B8FI70 Ribosomal protein S1 n=14 Tax=Proteobacteria Rep... 523 e-147 UniRef50_C1FAB9 Ribosomal protein S1 n=2 Tax=Bacteria RepID=C1FA... 518 e-145 UniRef50_C4XQS6 30S ribosomal protein S1 n=3 Tax=Desulfovibrio R... 517 e-145 UniRef50_Q1MQB8 Ribosomal protein S1 n=2 Tax=Desulfovibrionaceae... 516 e-144 UniRef50_D0LJ72 Ribosomal protein S1 n=1 Tax=Haliangium ochraceu... 511 e-143 UniRef50_D1N749 Ribosomal protein S1 n=1 Tax=Victivallis vadensi... 510 e-143 UniRef50_A8ZTA2 Ribosomal protein S1 n=22 Tax=Deltaproteobacteri... 504 e-141 UniRef50_B6AR90 Ribosomal protein S1 n=1 Tax=Leptospirillum sp. ... 499 e-139 UniRef50_Q48082 30S ribosomal protein S1 n=129 Tax=Proteobacteri... 494 e-138 UniRef50_D2R4L6 Ribosomal protein S1 n=7 Tax=Planctomycetales Re... 491 e-137 UniRef50_C9RMY1 Ribosomal protein S1 n=1 Tax=Fibrobacter succino... 490 e-137 UniRef50_B3E440 Ribosomal protein S1 n=3 Tax=Deltaproteobacteria... 487 e-136 UniRef50_Q6NDP1 30S ribosomal protein S1 n=165 Tax=Proteobacteri... 487 e-136 UniRef50_C1A406 30S ribosomal protein S1 n=1 Tax=Gemmatimonas au... 478 e-133 UniRef50_B3QSU3 Ribosomal protein S1 n=1 Tax=Chloroherpeton thal... 478 e-133 UniRef50_Q2S1M7 Ribosomal protein S1, putative n=2 Tax=Rhodother... 474 e-132 UniRef50_Q89AJ3 30S ribosomal protein S1 n=296 Tax=Proteobacteri... 474 e-132 UniRef50_B0VI92 30S ribosomal subunit protein S1 (Modular protei... 470 e-131 UniRef50_Q9Z8M3 30S ribosomal protein S1 n=18 Tax=Chlamydiae/Ver... 469 e-130 UniRef50_A4SGB6 SSU ribosomal protein S1P n=12 Tax=Chlorobiaceae... 460 e-128 UniRef50_B2UME1 Ribosomal protein S1 n=6 Tax=Chlamydiae/Verrucom... 459 e-127 UniRef50_Q1RJH1 30S ribosomal protein S1 n=16 Tax=Alphaproteobac... 452 e-125 UniRef50_B2S2M7 Ribosomal protein S1 n=5 Tax=Bacteria RepID=B2S2... 451 e-125 UniRef50_C6XS49 RNA binding S1 domain protein n=62 Tax=Bacteroid... 438 e-121 UniRef50_Q0EYT6 Ribosomal protein S1 n=1 Tax=Mariprofundus ferro... 432 e-119 UniRef50_B0SDL5 30S Ribosomal protein S1 n=6 Tax=Leptospira RepI... 430 e-119 UniRef50_B5YH71 30S ribosomal protein S1 n=1 Tax=Thermodesulfovi... 428 e-118 UniRef50_Q027A8 SSU ribosomal protein S1P n=2 Tax=Acidobacteria ... 425 e-117 UniRef50_Q1IY12 RNA binding S1 n=9 Tax=Deinococci RepID=Q1IY12_D... 421 e-116 UniRef50_B3TCT6 Putative S1 RNA binding domain protein n=2 Tax=r... 411 e-113 UniRef50_D0J9D1 30S ribosomal protein S1 n=25 Tax=Bacteria RepID... 402 e-110 UniRef50_B5Y9T3 Ribosomal protein S1 n=1 Tax=Coprothermobacter p... 401 e-110 UniRef50_C1SLB2 4-hydroxy-3-methylbut-2-enyl diphosphate reducta... 400 e-110 UniRef50_C0QZM2 30S ribosomal protein S1 n=2 Tax=Brachyspira Rep... 393 e-108 UniRef50_C5CIV0 RNA binding S1 domain protein n=1 Tax=Kosmotoga ... 386 e-105 UniRef50_A8F7S1 RNA binding S1 domain protein n=1 Tax=Thermotoga... 385 e-105 UniRef50_C3XIZ7 30s ribosomal protein s1 n=6 Tax=Campylobacteral... 382 e-104 UniRef50_Q3YRK4 SSU ribosomal protein S1P n=21 Tax=Rickettsiales... 381 e-104 UniRef50_D0RRD0 30S ribosomal protein S1 n=1 Tax=alpha proteobac... 380 e-104 UniRef50_Q9ZKF6 30S ribosomal protein S1 n=44 Tax=Epsilonproteob... 380 e-104 UniRef50_Q30ZT8 SSU ribosomal protein S1P n=1 Tax=Desulfovibrio ... 380 e-104 UniRef50_D1B5G8 RNA binding S1 domain protein n=3 Tax=Synergista... 378 e-103 UniRef50_Q7VJV6 Ribosomal protein S1 n=3 Tax=Helicobacter RepID=... 376 e-102 UniRef50_B8DPH9 RNA binding S1 domain protein n=4 Tax=Desulfovib... 374 e-102 UniRef50_C6BYI5 RNA binding S1 domain protein n=4 Tax=Desulfovib... 373 e-102 UniRef50_A8ZTZ3 RNA binding S1 domain protein n=1 Tax=Desulfococ... 372 e-101 UniRef50_B5YEY5 Ribosomal protein S1, putative n=2 Tax=Dictyoglo... 370 e-101 UniRef50_Q2GE01 Ribosomal protein S1 n=2 Tax=Neorickettsia RepID... 370 e-101 UniRef50_D1Y3S9 30S ribosomal protein S1 n=1 Tax=Pyramidobacter ... 366 2e-99 UniRef50_B1LBI3 RNA binding S1 domain protein n=5 Tax=Thermotoga... 364 4e-99 UniRef50_B8J034 RNA binding S1 domain protein n=2 Tax=Desulfovib... 361 3e-98 UniRef50_C0GUF0 RNA binding S1 domain protein n=1 Tax=Desulfonat... 358 2e-97 UniRef50_C7NE91 RNA binding S1 domain protein n=3 Tax=Leptotrich... 358 2e-97 UniRef50_Q8KTS5 Ribosomal protein S1 n=1 Tax=Candidatus Tremblay... 354 5e-96 UniRef50_B0VFT2 Putative Ribosomal protein S1 n=1 Tax=Candidatus... 354 6e-96 UniRef50_D1AGH2 RNA binding S1 domain protein n=1 Tax=Sebaldella... 353 8e-96 UniRef50_C0QM45 RpsA1 n=2 Tax=Desulfobacteraceae RepID=C0QM45_DESAH 353 1e-95 UniRef50_C7LJY0 Putative ribosomal protein S1 n=1 Tax=Candidatus... 353 1e-95 UniRef50_A7HME7 Hydroxymethylbutenyl pyrophosphate reductase n=1... 353 1e-95 UniRef50_Q1V1Q4 30S ribosomal protein S1 n=3 Tax=Candidatus Pela... 352 2e-95 UniRef50_Q8RI52 4-hydroxy-3-methylbut-2-enyl diphosphate reducta... 351 3e-95 UniRef50_A1HTW2 Hydroxymethylbutenyl pyrophosphate reductase n=4... 350 9e-95 UniRef50_B7IE33 4-hydroxy-3-methylbut-2-enyl diphosphate reducta... 350 1e-94 UniRef50_Q2RIU7 Hydroxymethylbutenyl pyrophosphate reductase n=1... 347 7e-94 UniRef50_D2L2R4 RNA binding S1 domain protein n=1 Tax=Desulfovib... 344 5e-93 UniRef50_O67462 Ribosomal protein S01 n=2 Tax=Aquificaceae RepID... 342 2e-92 UniRef50_A5CF24 30S ribosomal protein S1 n=2 Tax=Orientia tsutsu... 340 1e-91 UniRef50_B1I3Y7 Hydroxymethylbutenyl pyrophosphate reductase n=3... 339 2e-91 UniRef50_P46836 30S ribosomal protein S1 n=166 Tax=Actinobacteri... 335 3e-90 UniRef50_A1QYS7 SSU ribosomal protein S1P n=23 Tax=Borrelia RepI... 335 3e-90 UniRef50_Q67NT8 30S ribosomal protein S1 n=1 Tax=Symbiobacterium... 333 8e-90 UniRef50_C0QT24 Ribosomal protein S01 n=1 Tax=Persephonella mari... 331 3e-89 UniRef50_A4J3N5 Hydroxymethylbutenyl pyrophosphate reductase n=3... 329 2e-88 UniRef50_C5S7U3 RNA binding S1 domain protein n=1 Tax=Allochroma... 329 2e-88 UniRef50_C0GDV0 Hydroxymethylbutenyl pyrophosphate reductase n=1... 328 4e-88 UniRef50_B8CWY2 4-hydroxy-3-methylbut-2-enyl diphosphate reducta... 326 1e-87 UniRef50_B8G2Q3 Hydroxymethylbutenyl pyrophosphate reductase n=2... 325 3e-87 UniRef50_C8WX93 RNA binding S1 domain protein n=2 Tax=Alicycloba... 323 1e-86 UniRef50_A9BGS2 RNA binding S1 domain protein n=1 Tax=Petrotoga ... 323 2e-86 UniRef50_UPI0001C3232B RNA binding S1 domain protein n=1 Tax=Con... 323 2e-86 UniRef50_B9L032 30S ribosomal protein S1 n=1 Tax=Thermomicrobium... 319 2e-85 UniRef50_A6CB07 30S ribosomal protein S1 n=1 Tax=Planctomyces ma... 318 3e-85 UniRef50_A6TRF8 RNA binding S1 domain protein n=2 Tax=Alkaliphil... 317 6e-85 UniRef50_D1C7V0 RNA binding S1 domain protein n=2 Tax=Chloroflex... 317 9e-85 UniRef50_C1DT56 Ribosomal protein S01 n=3 Tax=Sulfurihydrogenibi... 316 2e-84 UniRef50_A6DP56 30S ribosomal protein S1 n=1 Tax=Lentisphaera ar... 316 2e-84 UniRef50_Q1D6H1 Ribosomal protein S1 family protein n=2 Tax=Cyst... 314 4e-84 UniRef50_Q0AXA2 Hydroxymethylbutenyl pyrophosphate reductase n=1... 312 2e-83 UniRef50_A9AV75 RNA binding S1 domain protein n=5 Tax=Chloroflex... 311 6e-83 UniRef50_C7H149 4-hydroxy-3-methylbut-2-enyl diphosphate reducta... 310 8e-83 UniRef50_B3WE79 30S Ribosomal protein S1 n=52 Tax=Firmicutes Rep... 310 9e-83 UniRef50_C7RHT6 Hydroxymethylbutenyl pyrophosphate reductase n=8... 309 2e-82 UniRef50_Q1NY10 RNA binding S1 n=3 Tax=Deltaproteobacteria RepID... 308 3e-82 UniRef50_B2A4N7 Hydroxymethylbutenyl pyrophosphate reductase n=1... 306 2e-81 UniRef50_A9ESM2 RpsA3 protein n=1 Tax=Sorangium cellulosum 'So c... 305 3e-81 UniRef50_A2ID48 RpsA n=1 Tax=Pasteuria ramosa RepID=A2ID48_9BACL 304 5e-81 UniRef50_C8R0E8 RNA binding S1 domain protein n=1 Tax=Desulfuriv... 304 6e-81 UniRef50_UPI0000F2B0DB PREDICTED: similar to KIAA0185 n=1 Tax=Mo... 303 8e-81 UniRef50_Q14690 Protein RRP5 homolog n=24 Tax=Metazoa RepID=RRP5... 301 5e-80 UniRef50_UPI000194C80A PREDICTED: programmed cell death 11 n=2 T... 300 8e-80 UniRef50_B0MQU3 Putative uncharacterized protein n=2 Tax=Bacteri... 298 4e-79 UniRef50_P50889 40S ribosomal protein S1 n=37 Tax=Bacilli RepID=... 298 5e-79 UniRef50_C1ZHL8 Ribosomal protein S1 n=1 Tax=Planctomyces limnop... 298 5e-79 UniRef50_A3DDC0 Hydroxymethylbutenyl pyrophosphate reductase n=7... 298 5e-79 UniRef50_D1VSI0 4-hydroxy-3-methylbut-2-enyl diphosphate reducta... 296 2e-78 UniRef50_C9LMR5 Hydroxymethylbutenyl pyrophosphate reductase/rib... 295 3e-78 UniRef50_Q49XT0 30S ribosomal protein S1 n=6 Tax=Staphylococcace... 292 2e-77 UniRef50_C1G573 rRNA biogenesis protein RRP5 n=4 Tax=Onygenales ... 292 2e-77 UniRef50_A3ZTD7 30S ribosomal protein S1 n=2 Tax=Bacteria RepID=... 292 3e-77 UniRef50_D1BMA5 Hydroxymethylbutenyl pyrophosphate reductase n=3... 291 4e-77 UniRef50_D1AVV2 RNA binding S1 domain protein n=1 Tax=Streptobac... 291 7e-77 UniRef50_Q5KH56 RRNA processing-related protein, putative n=2 Ta... 291 7e-77 UniRef50_A8YV34 30S ribosomal protein S1 n=29 Tax=Lactobacillus ... 290 8e-77 UniRef50_C6PXA3 RNA binding S1 domain protein n=1 Tax=Clostridiu... 290 1e-76 UniRef50_A6S458 Putative uncharacterized protein n=1 Tax=Botryot... 289 2e-76 UniRef50_B1C7U3 Putative uncharacterized protein n=1 Tax=Anaerof... 288 6e-76 UniRef50_Q5HFU7 30S ribosomal protein S1 n=61 Tax=Staphylococcus... 288 6e-76 UniRef50_C9LUH9 Hydroxymethylbutenyl pyrophosphate reductase n=1... 287 8e-76 UniRef50_UPI00017435B0 LytB protein n=1 Tax=candidate division T... 286 1e-75 UniRef50_Q0TNG2 Ribosomal protein S1 family n=9 Tax=Clostridium ... 286 2e-75 UniRef50_UPI00016C0B56 30S ribosomal protein S1 n=1 Tax=Epulopis... 286 2e-75 UniRef50_Q5M0R3 30S ribosomal protein S1 n=88 Tax=Bacilli RepID=... 285 4e-75 UniRef50_P38494 30S ribosomal protein S1 homolog n=22 Tax=Bacill... 284 5e-75 UniRef50_A2R624 Function: RRP5 is required for formation of both... 284 7e-75 UniRef50_A9KLR6 Hydroxymethylbutenyl pyrophosphate reductase n=5... 284 8e-75 UniRef50_Q7UWH7 30S ribosomal protein S1 n=1 Tax=Rhodopirellula ... 283 1e-74 UniRef50_B8JIP9 Programmed cell death 11 n=5 Tax=Clupeocephala R... 283 2e-74 UniRef50_A4IQA6 30S ribosomal protein S1 n=10 Tax=Bacillaceae Re... 283 2e-74 UniRef50_D2R2F1 RNA binding S1 domain protein n=1 Tax=Pirellula ... 282 2e-74 UniRef50_A4QP01 Pdcd11 protein n=4 Tax=Clupeocephala RepID=A4QP0... 282 2e-74 UniRef50_C9SZ75 rRNA biogenesis protein RRP5 n=5 Tax=Sordariomyc... 282 2e-74 UniRef50_A9B766 RNA binding S1 domain protein n=6 Tax=Chloroflex... 282 3e-74 UniRef50_O06000 30S ribosomal protein S1 homolog n=76 Tax=Bacill... 281 4e-74 UniRef50_D0LLG7 RNA binding S1 domain protein n=1 Tax=Haliangium... 281 6e-74 UniRef50_D1Z6Q4 Whole genome shotgun sequence assembly, scaffold... 280 1e-73 UniRef50_C5NX49 30S ribosomal protein S1 n=1 Tax=Gemella haemoly... 279 2e-73 UniRef50_B3T9S8 Putative S1 RNA binding domain protein n=1 Tax=u... 279 2e-73 UniRef50_A0JMT9 LOC779090 protein (Fragment) n=5 Tax=Tetrapoda R... 277 5e-73 UniRef50_A1AM10 SSU ribosomal protein S1P n=10 Tax=Desulfuromona... 277 9e-73 UniRef50_D1PP74 4-hydroxy-3-methylbut-2-enyl diphosphate reducta... 276 2e-72 UniRef50_D1CBU2 RNA binding S1 domain protein n=1 Tax=Thermobacu... 275 3e-72 UniRef50_B4U6I5 RNA binding S1 domain protein n=1 Tax=Hydrogenob... 273 1e-71 UniRef50_A7G2Q4 Ribosomal protein S1 n=13 Tax=Clostridium RepID=... 271 4e-71 UniRef50_B0KVD5 30S ribosomal protein S1 n=1 Tax=uncultured cand... 271 4e-71 UniRef50_C4V2L6 Possible 30S ribosomal protein S1 n=2 Tax=Seleno... 271 7e-71 UniRef50_UPI00016C5864 30S ribosomal protein S1 n=1 Tax=Gemmata ... 269 2e-70 UniRef50_A9SPX0 Predicted protein n=2 Tax=cellular organisms Rep... 266 2e-69 UniRef50_D2RKJ8 Hydroxymethylbutenyl pyrophosphate reductase n=3... 266 2e-69 UniRef50_A6LQP2 RNA binding S1 domain protein n=7 Tax=Clostridiu... 261 4e-68 UniRef50_B6K2R4 U3 snoRNP-associated protein Rrp5 n=1 Tax=Schizo... 260 1e-67 UniRef50_B0CR68 Predicted protein n=3 Tax=Agaricales RepID=B0CR6... 260 1e-67 UniRef50_UPI00016B22D3 RNA binding S1 domain protein n=2 Tax=can... 260 1e-67 UniRef50_C3XPK3 Putative uncharacterized protein n=1 Tax=Branchi... 257 6e-67 UniRef50_Q05022 rRNA biogenesis protein RRP5 n=10 Tax=Saccharomy... 257 1e-66 UniRef50_Q0UD83 Putative uncharacterized protein n=1 Tax=Phaeosp... 256 1e-66 UniRef50_A7SBJ3 Predicted protein n=2 Tax=Nematostella vectensis... 256 1e-66 UniRef50_Q6MNP5 30S ribosomal protein S1 n=1 Tax=Bdellovibrio ba... 256 2e-66 UniRef50_A8Z6B9 Putative ribosomal protein S1 n=1 Tax=Candidatus... 255 3e-66 UniRef50_B0K198 RNA binding S1 domain protein n=7 Tax=Thermoanae... 253 1e-65 UniRef50_B4UDY4 RNA binding S1 domain protein n=4 Tax=Anaeromyxo... 253 1e-65 UniRef50_UPI0000E22681 PREDICTED: programmed cell death 11 n=1 T... 253 2e-65 UniRef50_B8PP03 Predicted protein (Fragment) n=1 Tax=Postia plac... 252 2e-65 UniRef50_A5DPT1 Putative uncharacterized protein n=2 Tax=Pichia ... 252 3e-65 UniRef50_Q6BJC7 DEHA2G03410p n=4 Tax=Saccharomycetales RepID=Q6B... 252 4e-65 UniRef50_B9WAR4 rRNA biogenesis protein, putative n=5 Tax=Saccha... 251 4e-65 UniRef50_A9NGK8 Small subunit ribosomal protein S1 n=1 Tax=Achol... 251 4e-65 UniRef50_A5V0B5 RNA binding S1 domain protein n=3 Tax=Chloroflex... 251 8e-65 UniRef50_C9XMD9 Putative 30S ribosomal protein S1 n=7 Tax=Clostr... 251 8e-65 UniRef50_Q7X2Y7 Putative 30S ribosomal protein S1 (Fragment) n=1... 249 2e-64 UniRef50_C6P7Z4 RNA binding S1 domain protein n=1 Tax=Thermoanae... 247 5e-64 UniRef50_Q9LHM6 Pre-rRNA processing protein RRP5 n=6 Tax=rosids ... 247 9e-64 UniRef50_C4R3F9 RNA binding protein with preference for single s... 246 2e-63 UniRef50_A4S384 Predicted protein n=2 Tax=Ostreococcus RepID=A4S... 245 4e-63 UniRef50_A6GGH5 Ribosomal protein S1 n=1 Tax=Plesiocystis pacifi... 244 6e-63 UniRef50_B3SB29 Putative uncharacterized protein n=1 Tax=Trichop... 244 7e-63 UniRef50_D1IA06 Whole genome shotgun sequence of line PN40024, s... 244 9e-63 UniRef50_Q4EP69 Ribosomal protein S1, putative (Fragment) n=1 Ta... 243 1e-62 UniRef50_O74835 rRNA biogenesis protein rrp5 n=1 Tax=Schizosacch... 242 3e-62 UniRef50_C5DF89 KLTH0D13156p n=2 Tax=Saccharomycetaceae RepID=C5... 242 3e-62 UniRef50_A8PVH2 Putative uncharacterized protein n=1 Tax=Malasse... 239 3e-61 UniRef50_UPI0001983EAA PREDICTED: hypothetical protein n=1 Tax=V... 236 1e-60 UniRef50_Q4PGT5 Putative uncharacterized protein n=1 Tax=Ustilag... 236 1e-60 UniRef50_A5N6D1 30S ribosomal protein S1 n=2 Tax=Clostridium klu... 232 3e-59 UniRef50_C5XCN3 Putative uncharacterized protein Sb02g006000 n=1... 231 6e-59 UniRef50_C1ECK5 Predicted protein n=1 Tax=Micromonas sp. RCC299 ... 230 1e-58 UniRef50_B2W7W2 rRNA biogenesis protein RRP5 n=1 Tax=Pyrenophora... 230 1e-58 UniRef50_A9WBG5 RNA binding S1 domain protein n=2 Tax=Chloroflex... 227 1e-57 UniRef50_P73530 30S ribosomal protein S1 homolog A n=61 Tax=cell... 225 3e-57 UniRef50_B9L9K6 30S ribosomal protein S1 n=2 Tax=Nautiliaceae Re... 225 4e-57 UniRef50_A9B5U0 RNA binding S1 domain protein n=1 Tax=Herpetosip... 224 5e-57 UniRef50_B0SDD9 30S Ribosomal protein S1 n=6 Tax=Leptospira RepI... 222 3e-56 UniRef50_A4XKP1 Hydroxymethylbutenyl pyrophosphate reductase n=1... 221 6e-56 UniRef50_Q6C430 YALI0E30217p n=1 Tax=Yarrowia lipolytica RepID=Q... 221 7e-56 UniRef50_D0NSW6 rRNA biogenesis protein rrp5 n=1 Tax=Phytophthor... 217 1e-54 UniRef50_C1NA95 Predicted protein n=1 Tax=Micromonas pusilla CCM... 216 2e-54 UniRef50_A8V2R4 Ribosomal protein S01 n=1 Tax=Hydrogenivirga sp.... 215 3e-54 UniRef50_B9MRX3 Hydroxymethylbutenyl pyrophosphate reductase n=1... 215 3e-54 UniRef50_Q70DX8 Plastid ribosomal protein S1 n=6 Tax=Viridiplant... 214 6e-54 UniRef50_A4RTM3 Plastid ribosomal protein S1, imported to chloro... 214 1e-53 UniRef50_B4WRF0 S1 RNA binding domain protein n=1 Tax=Synechococ... 208 5e-52 UniRef50_C1EEV9 Predicted protein n=2 Tax=Micromonas RepID=C1EEV... 207 1e-51 UniRef50_Q0PQN6 30S ribosomal subunit protein S1 (Fragment) n=2 ... 207 1e-51 UniRef50_P29344 30S ribosomal protein S1, chloroplastic n=21 Tax... 206 2e-51 UniRef50_D2AQV7 30S ribosomal protein S1 n=5 Tax=Actinomycetales... 205 3e-51 UniRef50_B1XJQ5 30S ribosomal protein S1 like protein n=1 Tax=Sy... 205 5e-51 UniRef50_C4FZ56 Putative uncharacterized protein n=1 Tax=Abiotro... 203 1e-50 UniRef50_O33698 30S ribosomal protein S1 n=12 Tax=Cyanobacteria ... 203 2e-50 UniRef50_P74142 30S ribosomal protein S1 homolog B n=14 Tax=Cyan... 201 7e-50 UniRef50_UPI0000E4A1DE PREDICTED: hypothetical protein n=2 Tax=S... 199 3e-49 UniRef50_C4G9K7 Putative uncharacterized protein n=1 Tax=Shuttle... 198 4e-49 UniRef50_B7FU58 Predicted protein (Fragment) n=1 Tax=Phaeodactyl... 195 3e-48 UniRef50_B8C8K9 RS1, ribosomal protein 1 (Fragment) n=1 Tax=Thal... 195 4e-48 UniRef50_A9KQA3 RNA binding S1 domain protein n=1 Tax=Clostridiu... 194 6e-48 UniRef50_B0MBX8 Putative uncharacterized protein n=7 Tax=Clostri... 194 7e-48 UniRef50_B2KCI0 RNA binding S1 domain protein n=1 Tax=Elusimicro... 193 2e-47 UniRef50_B8HSI0 RNA binding S1 domain protein n=1 Tax=Cyanothece... 192 2e-47 UniRef50_A5GJG3 30S ribosomal protein S1 n=1 Tax=Synechococcus s... 192 3e-47 UniRef50_Q54L26 Putative uncharacterized protein n=1 Tax=Dictyos... 190 1e-46 UniRef50_C6JH83 Putative uncharacterized protein n=2 Tax=Clostri... 189 2e-46 UniRef50_C5RED5 RNA binding S1 domain protein n=1 Tax=Clostridiu... 189 3e-46 UniRef50_UPI0001925B6E PREDICTED: similar to predicted protein, ... 186 2e-45 UniRef50_A9UQD5 Predicted protein (Fragment) n=1 Tax=Monosiga br... 185 3e-45 UniRef50_A8IBR0 RNA binding rRNA processing protein n=1 Tax=Chla... 185 5e-45 UniRef50_C7TYI6 Putative DnaJ (Hsp40) homolog, subfamily C, memb... 183 1e-44 UniRef50_Q46GP7 SSU ribosomal protein S1P n=24 Tax=cellular orga... 182 4e-44 UniRef50_B0XAB3 Programmed cell death protein 11 n=1 Tax=Culex q... 180 2e-43 UniRef50_D1X7G9 RNA binding S1 domain protein n=1 Tax=Streptomyc... 178 5e-43 UniRef50_P51345 30S ribosomal protein S1, chloroplastic n=2 Tax=... 178 5e-43 UniRef50_UPI000180B142 PREDICTED: similar to Protein RRP5 homolo... 177 8e-43 UniRef50_C4QQ62 Programmed cell death protein 11 (Pre-rRNA proce... 176 2e-42 UniRef50_Q31C04 SSU ribosomal protein S1P n=6 Tax=Prochlorococcu... 175 4e-42 UniRef50_Q0IED9 Programmed cell death protein 11 (Pre-rrna proce... 173 1e-41 UniRef50_Q7PQF3 AGAP003595-PA n=1 Tax=Anopheles gambiae RepID=Q7... 173 2e-41 UniRef50_UPI000186CABA programmed cell death protein, putative n... 172 3e-41 UniRef50_A8NFZ6 S1 RNA binding domain containing protein n=1 Tax... 172 3e-41 UniRef50_UPI0001BC83D1 30S ribosomal protein S1 n=1 Tax=Bacteroi... 169 3e-40 UniRef50_UPI0001925B6F PREDICTED: similar to predicted protein n... 169 3e-40 UniRef50_Q7XYL3 Ribosomal protein rpS1 n=1 Tax=Bigelowiella nata... 168 3e-40 UniRef50_B4QT45 GD18300 n=5 Tax=Drosophila RepID=B4QT45_DROSI 168 4e-40 UniRef50_UPI00018545D5 30S ribosomal protein S1 n=2 Tax=Helicoba... 167 1e-39 UniRef50_Q10MB3 30S ribosomal protein S1, chloroplast, putative,... 165 4e-39 UniRef50_A9WG06 RNA binding S1 domain protein n=3 Tax=Chloroflex... 165 4e-39 UniRef50_A7M5P8 Putative uncharacterized protein n=1 Tax=Bactero... 165 5e-39 UniRef50_C6LB27 Putative S1 RNA binding domain protein n=2 Tax=C... 163 2e-38 UniRef50_Q9VC94 CG5728 n=7 Tax=Sophophora RepID=Q9VC94_DROME 163 2e-38 UniRef50_C9NIQ1 RNA binding S1 domain protein n=2 Tax=Streptomyc... 163 2e-38 UniRef50_Q0D7X0 Os07g0203300 protein (Fragment) n=7 Tax=Magnolio... 162 3e-38 UniRef50_Q6B8Z9 30S ribosomal protein S1 n=1 Tax=Gracilaria tenu... 162 3e-38 UniRef50_B2XT45 30S ribosomal protein S1 n=2 Tax=Heterosigma aka... 161 5e-38 Sequences not found previously or not previously below threshold: >UniRef50_Q1IHI9 SSU ribosomal protein S1P n=6 Tax=Bacteria RepID=Q1IHI9_ACIBL Length = 609 Score = 527 bits (1357), Expect = e-148, Method: Composition-based stats. Identities = 249/560 (44%), Positives = 357/560 (63%), Gaps = 5/560 (0%) Query: 1 MTESFAQLFEESLKEIE---TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ 57 MTE FA E +E ++ G V++I V+VD GLKSE +P E+ K+ Sbjct: 50 MTEDFATALESFEQEQSEQALNEDRVLVGRVLSITPQYVVVDVGLKSEGVVPIEEVKDHD 109 Query: 58 GELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVK 117 G + Q G+E+ V + G LS +KA+R +AW +EKAY D ++ ++K Sbjct: 110 GNVSFQPGEEIAVMQEKGHTEEGYVHLSHQKAQRLKAWDEIEKAYNDKSSIKARAIDRIK 169 Query: 118 GGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESE 177 GG TV++ G RAFLPGS VD+RPVR+ L+G ELE ++IKL++KR N+VVSR+ ++E E Sbjct: 170 GGLTVDIMGARAFLPGSQVDLRPVRNLDALKGHELEVRIIKLNKKRGNIVVSRKQILEEE 229 Query: 178 NSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNV 237 + ++ + LE+L E + G VKNLTDYGAFVDLGG+DGLLHITDM+W R+ HP ++V V Sbjct: 230 QNDKKSKTLEHLNEDAVLTGTVKNLTDYGAFVDLGGIDGLLHITDMSWGRLTHPRDLVQV 289 Query: 238 GDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE 297 GD+I VKVLKFDR++ RVSLG KQL DPW+ ++RYP G ++ GRV ++TDYG F+E+E Sbjct: 290 GDQIQVKVLKFDRDKQRVSLGFKQLTPDPWLDASERYPIGARVHGRVISVTDYGAFIELE 349 Query: 298 EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQF 357 +G+EGLVHVSEM W+ + HPSK+VNVGD V+ +VL+++ + RRISLGLKQ + NPW+ Sbjct: 350 QGIEGLVHVSEMTWSKRMKHPSKIVNVGDQVDAVVLNVNPQERRISLGLKQLETNPWESL 409 Query: 358 AETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAA 417 E G VEGK++++TDFG FI ++ GIDGLVH+S++SW + KKGD++ A Sbjct: 410 HEKFPVGGVVEGKVRNLTDFGAFIEIEDGIDGLVHVSNLSWTKRVKHPSEVLKKGDKVKA 469 Query: 418 VVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGY 477 VVL ++ + R+SLGVKQL D + + ++ G I+ GKV + + GA +E+ADGVEG Sbjct: 470 VVLAIEPDNRRLSLGVKQLQPDVWETFFETHRVGDIIHGKVLRLASFGAFIEIADGVEGL 529 Query: 478 LRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQ 537 SEAS + L G E + K ++ + + LS+RA E + I Sbjct: 530 CHNSEASDEHGAPLK--LEPGQEFDFKIIKMNPDEKKVGLSLRAVGEEASRVEIENYKAP 587 Query: 538 EDANFSNNAMAEAFKAAKGE 557 ++ + E + + Sbjct: 588 ASSSPGAATIGELLSWKREQ 607 >UniRef50_B8FI70 Ribosomal protein S1 n=14 Tax=Proteobacteria RepID=B8FI70_DESAA Length = 616 Score = 523 bits (1348), Expect = e-147, Method: Composition-based stats. Identities = 265/550 (48%), Positives = 364/550 (66%), Gaps = 5/550 (0%) Query: 5 FAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQV 64 F L+EES K G +V G ++ IDKD VLVD G KSE IP +F G + ++ Sbjct: 57 FMALYEESFKR--FEEGEVVTGKIIQIDKDYVLVDIGYKSEGLIPIREFIEPDGTVAAEI 114 Query: 65 GDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL 124 GDEV+V ++ ++ ++S+EKA + + W ++ AYE+ V G I +VKGGF+V++ Sbjct: 115 GDEVEVMVERLDSEDEGVMVSKEKASKIKVWEEIKVAYEEEGIVEGTITHRVKGGFSVDI 174 Query: 125 NGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQ 184 G+ AFLPGS VD+RPVRD + GK FKV+K ++KR+N+V+SRR ++E E +R Sbjct: 175 -GVPAFLPGSQVDLRPVRDLDSMVGKVFTFKVLKYNRKRSNIVLSRRVILEKEREEQRSS 233 Query: 185 LLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 L+N+ EG V+G+VKN+T+YG FVDLGG+DGLLHITD++W RVKHPSE+ VG ITVK Sbjct: 234 TLQNIHEGKVVEGVVKNITEYGVFVDLGGIDGLLHITDISWGRVKHPSELFGVGQTITVK 293 Query: 245 VLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLV 304 VL D ER RVSLG+KQL EDPW + RYP G +++G+V +LTDYG FVE+EEG+EGL+ Sbjct: 294 VLDLDLERERVSLGMKQLKEDPWTTASDRYPVGERVSGKVVSLTDYGAFVELEEGIEGLI 353 Query: 305 HVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKG 364 HVSEM WT K HPSKVV+VGD +E +VLDI RR+SLG+KQ NPW E + G Sbjct: 354 HVSEMSWTRKIRHPSKVVSVGDDLEAVVLDIKPSNRRVSLGMKQVAPNPWDVIGEKYPIG 413 Query: 365 DRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDA 424 +EG+IK+ITDFG+FIG+D GIDGLVH+SDISW YKKGDE+ A+VL +D Sbjct: 414 TTIEGRIKNITDFGMFIGIDEGIDGLVHISDISWTKRINHPGDVYKKGDEVRAIVLHIDR 473 Query: 425 ERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEAS 484 E ER SLG+KQL DP+ + G V G +T+V G VEL +G+EG + SE + Sbjct: 474 ENERFSLGIKQLEPDPWETISERYQVGTKVNGLITSVTDFGIFVELEEGIEGLVHVSEVA 533 Query: 485 RDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSN 544 +++V+ +VGD VE ++ K R I LS++ +E +++ ++ Sbjct: 534 KEKVKTPVGQFNVGDTVETVVVNINPKERRIGLSIKRLEEDEQEGYFNEYMASNK--PAS 591 Query: 545 NAMAEAFKAA 554 +A+ EAF+ A Sbjct: 592 SALGEAFQRA 601 >UniRef50_C1FAB9 Ribosomal protein S1 n=2 Tax=Bacteria RepID=C1FAB9_ACIC5 Length = 637 Score = 518 bits (1335), Expect = e-145, Method: Composition-based stats. Identities = 245/553 (44%), Positives = 351/553 (63%), Gaps = 6/553 (1%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEI 62 ESF + +V G V+ + V+VD GLKSE IP +Q + + ++ Sbjct: 88 ESFDREQAAEAAASSFDDTQVVNGTVIKLTDKHVVVDVGLKSEGLIPLDQVLDHNQQPKV 147 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 Q GD V+V + E+ G LLS EKA R W T+EKA + VTG++ G+VKGG TV Sbjct: 148 QPGDTVEV-VIEREEAEGGFLLSYEKALRLRVWDTIEKAANEKTPVTGIVAGRVKGGLTV 206 Query: 123 ELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 ++ GI+AFLPGS +++RPVR+ G+ +E +VIKL++KR NVVVSR+ ++E E +A+R Sbjct: 207 DI-GIKAFLPGSQLEIRPVRNLDAYIGQPIEVRVIKLNKKRGNVVVSRKEILEEEQTAKR 265 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 + LE+L+EG + G VKNLTDYGAFVD+GG+DGLLHITDM+W R+ HP ++VNVGDEI Sbjct: 266 SETLEHLEEGSILTGTVKNLTDYGAFVDMGGIDGLLHITDMSWGRLTHPRDLVNVGDEIQ 325 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 VKVLKFDR++ RVSLG KQL DPW+ +RYP G ++ GRV ++TDYG FVE+E+G+EG Sbjct: 326 VKVLKFDRDKQRVSLGFKQLTPDPWLDATERYPVGARVRGRVLSVTDYGSFVELEQGIEG 385 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHN 362 LVHVSEM W+ + HPSK++ GD VE +VL ++ RRISLG+KQ + NPW+ + + Sbjct: 386 LVHVSEMTWSKRMKHPSKMLKPGDEVETVVLSVNPTDRRISLGMKQLQDNPWETLGDKYP 445 Query: 363 KGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQV 422 G VEG+++++TDFG FI ++ GIDGLVH+S++SW + KKG+++ AVVL V Sbjct: 446 TGATVEGRVRNLTDFGAFIEIEDGIDGLVHVSNLSWTKRVKHPSEVLKKGEKVRAVVLGV 505 Query: 423 DAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASE 482 + E R+SLG+KQL D + + ++ G +V GKV GA +E+A+GVEG SE Sbjct: 506 EPENRRLSLGIKQLQPDVWETFFEQHRTGDVVHGKVLRTAQFGAFIEIAEGVEGLCHVSE 565 Query: 483 ASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANF 542 A+ L G E + K ++ + + LS+RA E + + + Sbjct: 566 ATDQHGAPVN--LEQGQEYDFKIIKMNPDEKKVGLSLRAVGEEASRADVEAYKA--PVSS 621 Query: 543 SNNAMAEAFKAAK 555 S + + + Sbjct: 622 STTTLGDLMNWKR 634 Score = 333 bits (855), Expect = 9e-90, Method: Composition-based stats. Identities = 133/472 (28%), Positives = 232/472 (49%), Gaps = 16/472 (3%) Query: 73 DAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFL 131 + ++ + E R +A +++D + V G + V++ + Sbjct: 74 EDIDLNSMDFAAVLESFDREQAAEAAASSFDDTQVVNGTVIKLTDKHVVVDVGLKSEGLI 133 Query: 132 PGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQE 191 P V + + G +E + + + + ++ +A+ E Sbjct: 134 PLDQVLDHNQQPKVQP-GDTVEVVIEREEAEGGFLLSYEKALRLRVWDTIEKAANEKTPV 192 Query: 192 GMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRE 251 V G VK G VD+ G+ L + + + V++ +G I V+V+K +++ Sbjct: 193 TGIVAGRVKG----GLTVDI-GIKAFLPGSQLEIRPVRNLDAY--IGQPIEVRVIKLNKK 245 Query: 252 RTRVSLGLKQLGED----PWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVS 307 R V + K++ E+ + EG+ LTG V NLTDYG FV++ G++GL+H++ Sbjct: 246 RGNVVVSRKEILEEEQTAKRSETLEHLEEGSILTGTVKNLTDYGAFVDMG-GIDGLLHIT 304 Query: 308 EMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRV 367 +M W + HP +VNVGD ++V VL D +++R+SLG KQ +PW E + G RV Sbjct: 305 DMSWG-RLTHPRDLVNVGDEIQVKVLKFDRDKQRVSLGFKQLTPDPWLDATERYPVGARV 363 Query: 368 EGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERE 427 G++ S+TD+G F+ L+ GI+GLVH+S+++W+ + + K GDE+ VVL V+ Sbjct: 364 RGRVLSVTDYGSFVELEQGIEGLVHVSEMTWSKRMKHPSKMLKPGDEVETVVLSVNPTDR 423 Query: 428 RISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASR-D 486 RISLG+KQL ++P+ GA V G+V + GA +E+ DG++G + S S Sbjct: 424 RISLGMKQLQDNPWETLGDKYPTGATVEGRVRNLTDFGAFIEIEDGIDGLVHVSNLSWTK 483 Query: 487 RVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQE 538 RV+ + VL G++V A GV+ +NR +SL ++ + + Sbjct: 484 RVKHPSEVLKKGEKVRAVVLGVEPENRRLSLGIKQLQPDVWETFFEQHRTGD 535 >UniRef50_C4XQS6 30S ribosomal protein S1 n=3 Tax=Desulfovibrio RepID=C4XQS6_DESMR Length = 576 Score = 517 bits (1331), Expect = e-145, Method: Composition-based stats. Identities = 262/559 (46%), Positives = 375/559 (67%), Gaps = 3/559 (0%) Query: 1 MTESFAQLFEESLKEI--ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQG 58 M +F E L E + GSI GVVV I K+ VLVD KSE IP +F +A G Sbjct: 15 MEVNFEDALENYLNEDFGDLEEGSITPGVVVRIGKEHVLVDVNFKSEGQIPVSEFMDALG 74 Query: 59 ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 ELE++VGD++DV + + + G ++SRE+AKR + + LE+ E + ++G I ++KG Sbjct: 75 ELEVKVGDQIDVYVVSKNESEGTIIMSRERAKRMQLFDKLEEIQEKDDVISGKIVRRIKG 134 Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 G+TV+L G+ AFLPGS VD+RPV D L G+E EF+V+K++++R+NV+VSRR ++E Sbjct: 135 GYTVDLGGVEAFLPGSHVDLRPVPDMDALVGQEFEFRVLKINRRRSNVIVSRRVLLEERR 194 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVG 238 + R LL+ L+EG V G VKN+T+YG FVDLGG+DGL+HITDM+WKR+KHP E+V++G Sbjct: 195 DSMRKDLLKTLEEGQTVTGRVKNITEYGVFVDLGGLDGLMHITDMSWKRIKHPKELVHLG 254 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE 298 DE+ +KVL FD+++ +VSLG+KQL DPW IA +YPE T+++G+VTNL DYG FVE+E Sbjct: 255 DELELKVLSFDQDKQKVSLGMKQLIADPWENIAGKYPEDTRMSGKVTNLVDYGAFVELEP 314 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFA 358 GVEGLVH+SEM WT K HPS++V+VGD VEV+VL +D +++RISLG+KQ + NPW A Sbjct: 315 GVEGLVHISEMSWTRKLRHPSQMVHVGDEVEVVVLSVDPDKKRISLGMKQVRPNPWDIVA 374 Query: 359 ETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAV 418 E + +G +EG +K+IT+FGIFIG++ GIDGL+H+SDISW +K GD + A Sbjct: 375 EKYPEGTILEGSVKNITEFGIFIGIEDGIDGLIHVSDISWTKKVRHPGEMFKSGDIVMAK 434 Query: 419 VLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYL 478 VL VD E E+ +LG+KQL+EDP+ GA+V G VT + G VE+ +G+EG + Sbjct: 435 VLTVDKENEKFTLGIKQLSEDPWTRVPDTYPVGAMVKGTVTNITDFGLFVEVEEGIEGLV 494 Query: 479 RASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQE 538 SE SR +V+ + GDE+EAK V R + LS+++ + ++K Sbjct: 495 HVSEISRKKVKTPAEIYKEGDEIEAKVIHVSADERRLGLSIKSIKDEEDKKKAKEFRTAG 554 Query: 539 DANFSNNAMAEAFKAAKGE 557 ++ +N + E + E Sbjct: 555 PSDTGSN-LGELLRQKLEE 572 Score = 241 bits (615), Expect = 6e-62, Method: Composition-based stats. Identities = 97/399 (24%), Positives = 171/399 (42%), Gaps = 16/399 (4%) Query: 158 KLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDG 216 K + +NN + E ++ +L+EG G+V + VD+ +G Sbjct: 3 KTQEMQNNSNMDMEVNFEDALENYLNEDFGDLEEGSITPGVVVRIGKEHVLVDVNFKSEG 62 Query: 217 LLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPE 276 + +++ + V VGD+I V V+ + + + ++ + E Sbjct: 63 QIPVSEFMDALGEL---EVKVGDQIDVYVVSKNESEGTIIMSRERAKRMQLFDKLEEIQE 119 Query: 277 -GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDI 335 ++G++ G V++ GVE + S + +V G E VL I Sbjct: 120 KDDVISGKIVRRIKGGYTVDLG-GVEAFLPGSHV-DLRPVPDMDALV--GQEFEFRVLKI 175 Query: 336 DEERRRISLGLKQCKANPWQQFAET----HNKGDRVEGKIKSITDFGIFIGLDGGIDGLV 391 + R + + + + +G V G++K+IT++G+F+ L GG+DGL+ Sbjct: 176 NRRRSNVIVSRRVLLEERRDSMRKDLLKTLEEGQTVTGRVKNITEYGVFVDL-GGLDGLM 234 Query: 392 HLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKG 451 H++D+SW + GDE+ VL D +++++SLG+KQL DP+ N + Sbjct: 235 HITDMSWKRI-KHPKELVHLGDELELKVLSFDQDKQKVSLGMKQLIADPWENIAGKYPED 293 Query: 452 AIVTGKVTAVDAKGATVELADGVEGYLRASEASRDR-VEDATLVLSVGDEVEAKFTGVDR 510 ++GKVT + GA VEL GVEG + SE S R + + ++ VGDEVE VD Sbjct: 294 TRMSGKVTNLVDYGAFVELEPGVEGLVHISEMSWTRKLRHPSQMVHVGDEVEVVVLSVDP 353 Query: 511 KNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAE 549 + ISL ++ + S + E Sbjct: 354 DKKRISLGMKQVRPNPWDIVAEKYPEGTILEGSVKNITE 392 >UniRef50_Q1MQB8 Ribosomal protein S1 n=2 Tax=Desulfovibrionaceae RepID=Q1MQB8_LAWIP Length = 574 Score = 516 bits (1328), Expect = e-144, Method: Composition-based stats. Identities = 250/556 (44%), Positives = 362/556 (65%), Gaps = 4/556 (0%) Query: 4 SFAQLFEESLKEI--ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE 61 +F E+ L + G+IV+G +V ID D VLVD KSE IP +F+N G + Sbjct: 17 NFESALEDYLSTDFGDLEEGTIVKGEIVRIDDDNVLVDVNFKSEGQIPTIEFQNTDGNIT 76 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 +VGD++DV + + G +LS EKAKR + + LE E + G I ++KGG+T Sbjct: 77 AKVGDKIDVFVVRKNEQEGTIILSFEKAKRMQLFDQLEDLQEKNGIIKGRIVRRIKGGYT 136 Query: 122 VELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 ++L G+ AFLPGS VD+RPV D L +E EF+V+K++++R+NV+VSRR ++E E ++ Sbjct: 137 IDLRGVEAFLPGSHVDLRPVPDMDMLVNQEYEFRVLKINRRRSNVIVSRRVLLEEERDSK 196 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEI 241 R LL+ + EG V G VKN+T+YG FVDLGG+DGLLHITDM+WKR++HP E+VN+G E+ Sbjct: 197 RQDLLQTISEGQVVVGKVKNVTEYGVFVDLGGLDGLLHITDMSWKRIRHPREMVNLGQEL 256 Query: 242 TVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVE 301 +KVL FD+E +VSLGLKQL DPW I +R+PE + G+VTNL DYG FVE+E GVE Sbjct: 257 ELKVLSFDKENQKVSLGLKQLVPDPWQDITERFPETSHHVGKVTNLVDYGVFVELESGVE 316 Query: 302 GLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETH 361 GLVH+SEM WT K HPS++V+ GD VEV++L ID++++RISLG+KQ K NPW+ E + Sbjct: 317 GLVHISEMSWTRKLRHPSQMVHQGDEVEVVILGIDQDKKRISLGMKQVKPNPWELVGEKY 376 Query: 362 NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQ 421 +G +EG +K+IT+FG+FIG++ GIDGL+H+SDISW +K GD + A VL Sbjct: 377 PEGTILEGVVKNITEFGMFIGIEDGIDGLIHVSDISWTKKVRHPNELFKVGDTVQAKVLT 436 Query: 422 VDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRAS 481 VD E E+ +LG+KQL EDP++N ++ G IV G +T + G VE+ +G+EG + S Sbjct: 437 VDQENEKFTLGIKQLTEDPWSNAPSVYPVGGIVKGIITNITDFGLFVEVEEGIEGLVHVS 496 Query: 482 EASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDAN 541 E S +++ + + G+E++AK V + R + LS++ E +E + Sbjct: 497 ELSSKKIKSPSEIYKDGEEIQAKIIHVSAEERRLGLSIKQLKEDEEHRKSREYS--RTGP 554 Query: 542 FSNNAMAEAFKAAKGE 557 S ++ + K E Sbjct: 555 DSGQSLGDLLKMKLEE 570 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 95/400 (23%), Positives = 167/400 (41%), Gaps = 16/400 (4%) Query: 157 IKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVD 215 ++ ++ N ES +L+EG VKG + + D VD+ + Sbjct: 1 METEETMENNGTDLDFNFESALEDYLSTDFGDLEEGTIVKGEIVRIDDDNVLVDVNFKSE 60 Query: 216 GLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYP 275 G + + + VGD+I V V++ + + + L ++ + Sbjct: 61 GQIPTIEFQN---TDGNITAKVGDKIDVFVVRKNEQEGTIILSFEKAKRMQLFDQLEDLQ 117 Query: 276 E-GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLD 334 E + GR+ G +++ GVE + S +D P + V E VL Sbjct: 118 EKNGIIKGRIVRRIKGGYTIDL-RGVEAFLPGSHVDLRPV---PDMDMLVNQEYEFRVLK 173 Query: 335 IDEERRRISLGLKQCKANPWQQFAETH----NKGDRVEGKIKSITDFGIFIGLDGGIDGL 390 I+ R + + + + ++G V GK+K++T++G+F+ L GG+DGL Sbjct: 174 INRRRSNVIVSRRVLLEEERDSKRQDLLQTISEGQVVVGKVKNVTEYGVFVDL-GGLDGL 232 Query: 391 VHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKK 450 +H++D+SW G E+ VL D E +++SLG+KQL DP+ + + Sbjct: 233 LHITDMSWKRI-RHPREMVNLGQELELKVLSFDKENQKVSLGLKQLVPDPWQDITERFPE 291 Query: 451 GAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDR-VEDATLVLSVGDEVEAKFTGVD 509 + GKVT + G VEL GVEG + SE S R + + ++ GDEVE G+D Sbjct: 292 TSHHVGKVTNLVDYGVFVELESGVEGLVHISEMSWTRKLRHPSQMVHQGDEVEVVILGID 351 Query: 510 RKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAE 549 + + ISL ++ + + + E Sbjct: 352 QDKKRISLGMKQVKPNPWELVGEKYPEGTILEGVVKNITE 391 >UniRef50_D0LJ72 Ribosomal protein S1 n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LJ72_HALO1 Length = 608 Score = 511 bits (1317), Expect = e-143, Method: Composition-based stats. Identities = 259/549 (47%), Positives = 364/549 (66%), Gaps = 4/549 (0%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE 61 ESFA LFEESL + E + G I++G V+++ KD +VD G KSE I ++F+ A G + Sbjct: 12 EESFAALFEESLNQEEVKEGDILQGTVISVGKDYAIVDIGYKSEGQIAIDEFRQADGGIL 71 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 + GD +DV L++ E+ G +LS+EKA R + W + A E E + G I +VKGG + Sbjct: 72 VTPGDVIDVLLESRENEAGMCVLSKEKADRFKVWDEISAACERDELIEGTITQRVKGGLS 131 Query: 122 VEL-NGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 V + G++AFLPGS VD+RPVR+ G+ +FKVIK ++KR N+V+SRR ++E E +A Sbjct: 132 VTIRGGVKAFLPGSQVDLRPVRNLDAFIGQSYKFKVIKFNKKRGNIVLSRRVLLEKERAA 191 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 ++ LE L+EG EV+GIVKNLT+YGAF+DLGG+DGLLHITDM+W RV HPSE+ VGD Sbjct: 192 LKESTLERLKEGQEVEGIVKNLTEYGAFIDLGGIDGLLHITDMSWGRVNHPSELFQVGDH 251 Query: 241 ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV 300 + VKVLKF+ + RVSLGLKQ+ EDPW ++Y GT + G+V +L DYG F+E+EEG+ Sbjct: 252 VRVKVLKFNADTERVSLGLKQISEDPWSKAQEKYIPGTVVRGKVVSLKDYGAFIELEEGI 311 Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAET 360 EGLVH+SEM WT + HPSK+V VGDVV+ +VLD+D + RISLG+KQ + NP++Q E Sbjct: 312 EGLVHISEMSWTRRVKHPSKMVAVGDVVDAVVLDVDVKNNRISLGMKQLEPNPYEQLNEK 371 Query: 361 HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL 420 + G V+GK+++I DFGIF+ ++ GIDGLVH+SD+SW + ++KGDE+ AV+L Sbjct: 372 YPPGTVVKGKVRNIADFGIFVEIEEGIDGLVHVSDMSWTQRVKHPSEMFQKGDEVEAVLL 431 Query: 421 QVDA---ERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGY 477 +D E+ +ISLG+KQL DP++ G IV KV V GA VE+ G+EG Sbjct: 432 NIDTADGEKPKISLGIKQLNTDPWDRIPFDFPPGKIVDAKVLKVLDFGAFVEIEKGIEGL 491 Query: 478 LRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQ 537 + SE S + V+D VL+ G E++ + VD + R I LSV++ + A E N Sbjct: 492 VHVSEISDEHVDDPRKVLTPGQELKVQILSVDPQERKIGLSVKSANRATEMAEAQGYNSP 551 Query: 538 EDANFSNNA 546 + Sbjct: 552 TAGTATLGD 560 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 103/389 (26%), Positives = 180/389 (46%), Gaps = 17/389 (4%) Query: 170 RRAVIESENSAERDQLL--ENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWK 226 ++ E +A ++ L E ++EG ++G V ++ A VD+G +G + I + Sbjct: 7 QKYEAEESFAALFEESLNQEEVKEGDILQGTVISVGKDYAIVDIGYKSEGQIAIDEF--- 63 Query: 227 RVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDP-WVAIAKRYPEGTKLTGRVT 285 R +V GD I V + + E L ++ W I+ + G +T Sbjct: 64 RQADGGILVTPGDVIDVLLESRENEAGMCVLSKEKADRFKVWDEISAACERDELIEGTIT 123 Query: 286 NLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLG 345 G V I GV+ + S++ + +G + V+ +++R I L Sbjct: 124 QRVKGGLSVTIRGGVKAFLPGSQV-DLRPVRNLDAF--IGQSYKFKVIKFNKKRGNIVLS 180 Query: 346 LKQCKANPW----QQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVA 401 + + E +G VEG +K++T++G FI L GGIDGL+H++D+SW Sbjct: 181 RRVLLEKERAALKESTLERLKEGQEVEGIVKNLTEYGAFIDL-GGIDGLLHITDMSWGRV 239 Query: 402 GEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAV 461 ++ GD + VL+ +A+ ER+SLG+KQ++EDP++ G +V GKV ++ Sbjct: 240 N-HPSELFQVGDHVRVKVLKFNADTERVSLGLKQISEDPWSKAQEKYIPGTVVRGKVVSL 298 Query: 462 DAKGATVELADGVEGYLRASEASR-DRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 GA +EL +G+EG + SE S RV+ + +++VGD V+A VD KN ISL ++ Sbjct: 299 KDYGAFIELEEGIEGLVHISEMSWTRRVKHPSKMVAVGDVVDAVVLDVDVKNNRISLGMK 358 Query: 521 AKDEADEKDAIATVNKQEDANFSNNAMAE 549 + + +A+ Sbjct: 359 QLEPNPYEQLNEKYPPGTVVKGKVRNIAD 387 Score = 83.9 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 30/200 (15%), Positives = 67/200 (33%), Gaps = 7/200 (3%) Query: 353 PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKG 412 E +GD ++G + S+ + + +G + + + G Sbjct: 20 EESLNQEEVKEGDILQGTVISVGKDYAIVDIGYKSEGQIAI----DEFRQADGGILVTPG 75 Query: 413 DEIAAVVLQVDAERERISLG-VKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELA 471 D I ++ + E L K ++ A ++ ++ G +T G +V + Sbjct: 76 DVIDVLLESRENEAGMCVLSKEKADRFKVWDEISAACERDELIEGTITQRVKGGLSVTIR 135 Query: 472 DGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAI 531 GV+ +L S+ V + +G + K ++K I LS R E + Sbjct: 136 GGVKAFLPGSQVDLRPVRNLDAF--IGQSYKFKVIKFNKKRGNIVLSRRVLLEKERAALK 193 Query: 532 ATVNKQEDANFSNNAMAEAF 551 + ++ + + Sbjct: 194 ESTLERLKEGQEVEGIVKNL 213 >UniRef50_D1N749 Ribosomal protein S1 n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N749_9BACT Length = 607 Score = 510 bits (1313), Expect = e-143, Method: Composition-based stats. Identities = 238/552 (43%), Positives = 340/552 (61%), Gaps = 7/552 (1%) Query: 4 SFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQ 63 S +L + S G IV G +VA D LVD G K+E +PA +F E Sbjct: 48 SMDELLQSSESTNAFTKGKIVEGKIVAKRPDGALVDIGYKAEGFVPASEFLKF---DEAN 104 Query: 64 VGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVE 123 +GD++DV L+ +E+ +S EKA +AW + Y + V G + +VKGG V+ Sbjct: 105 IGDKIDVYLEEIENRNNMPEISLEKAYSIKAWNRITTEYGEGHVVKGFMRHRVKGGIMVD 164 Query: 124 LNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERD 183 + G AFLPGS +DV PV + GKE + K+IK++ R N+VVSRR ++E +R Sbjct: 165 VEGFPAFLPGSQLDVGPVHNMDDYIGKEFDVKIIKINLDRRNIVVSRRELLEETLKDQRS 224 Query: 184 QLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITV 243 +LL ++ KG+VKN+TD+GAF+DLGGVDGLLHITD++W R+ HPSE++ VG+EI V Sbjct: 225 KLLGEMKVDELRKGVVKNITDFGAFIDLGGVDGLLHITDISWGRISHPSEVLKVGEEIEV 284 Query: 244 KVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGL 303 ++ D+E+ RVSLGLKQ +PW + +YP+G+K+ G+V N+ YG FVEIE GVEGL Sbjct: 285 VIIGIDKEKERVSLGLKQKTRNPWDDVVSKYPKGSKINGKVVNIMPYGAFVEIETGVEGL 344 Query: 304 VHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNK 363 +HVSEM WT + S V+++G+ VE +VLDID + R+ISLGL+Q + NPW+ AE + Sbjct: 345 IHVSEMSWTKRVSKASDVLSIGEEVEAVVLDIDRDSRKISLGLRQKERNPWEVLAEKYPV 404 Query: 364 GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVD 423 G R+ GK++++T +G F+ ++ IDG++H+SD+SW K G E+ A++L ++ Sbjct: 405 GRRITGKVRNMTSYGAFVEIENDIDGMIHVSDMSWTRKINNPNEVLKPGQEVEAIILDIN 464 Query: 424 AERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEA 483 E++RISLG+KQ DP+ N L K G +V GKVT + A GA VEL + ++G + S+ Sbjct: 465 PEQQRISLGLKQAETDPWANINDLYKVGDVVKGKVTKIAAFGAFVELTNKIDGLIHISQL 524 Query: 484 SRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDE----ADEKDAIATVNKQED 539 SRDRVE VL+VGDEVEA+ VD R I LS++A E D K A Sbjct: 525 SRDRVEKVKDVLNVGDEVEARVIKVDTDERRIGLSIKAVGENFSPEDLKAAEEEYTAALK 584 Query: 540 ANFSNNAMAEAF 551 + M E F Sbjct: 585 PGEAMVDMGEVF 596 >UniRef50_A8ZTA2 Ribosomal protein S1 n=22 Tax=Deltaproteobacteria RepID=A8ZTA2_DESOH Length = 604 Score = 504 bits (1298), Expect = e-141, Method: Composition-based stats. Identities = 247/540 (45%), Positives = 364/540 (67%), Gaps = 3/540 (0%) Query: 14 KEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALD 73 + G +V G V+A+DKD VLVD G KSE I +FKN +GE+ +++ D+V+V ++ Sbjct: 33 TFKQFTEGEVVVGKVIAVDKDYVLVDIGYKSEGQININEFKNEKGEVNVKIYDDVEVMIE 92 Query: 74 AVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPG 133 ++ + +LS++KA++ + W T++ +++ V+GVI +VKGGF+V++ G++AFLPG Sbjct: 93 FWDEEHEKLVLSKDKAEKDKIWETIKDTFDNDGVVSGVIINRVKGGFSVDV-GLQAFLPG 151 Query: 134 SLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGM 193 S D+RP+R+ + G+ +FKV+K +++RNN+V+SRR ++E + +R +L+E L +G Sbjct: 152 SQADLRPIRNFDEMVGQTYDFKVLKYNRRRNNIVLSRRVLLEETLATKRAELMETLADGQ 211 Query: 194 EVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERT 253 V+GIVKN+T+YG FVDLGG+DGLLHITD++W RV+HPSE+ VGD +T+KVL FD ++ Sbjct: 212 VVEGIVKNITEYGVFVDLGGIDGLLHITDISWGRVRHPSELFTVGDNVTLKVLSFDLDKK 271 Query: 254 RVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTN 313 ++SLG+KQL DPW + A++YP G K TG+V ++T+YG FVE+EEGVEGL+HVSE+ WT Sbjct: 272 KISLGMKQLTPDPWESAAEKYPVGVKTTGKVVSITNYGIFVELEEGVEGLIHVSEISWTR 331 Query: 314 KNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKS 373 K HPSKVVN+G+ V+ +VLDI RRISLG+KQ + NPW+ +E + G +EG+IK+ Sbjct: 332 KIRHPSKVVNIGEEVDAVVLDIQPGNRRISLGMKQVEPNPWEVISEKYPVGTVIEGRIKN 391 Query: 374 ITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGV 433 ITDFG+FIG+D IDGLVH+SDISW + YKKGD + AVVL++D ER S+G+ Sbjct: 392 ITDFGLFIGIDDDIDGLVHISDISWTKRIKHPSEIYKKGDLVRAVVLEIDKANERFSMGI 451 Query: 434 KQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATL 493 KQL DP+ + G V+G VT V G VEL +G+EG + SE S +R++ Sbjct: 452 KQLESDPWESVRDRYPIGTKVSGVVTNVTDFGIFVELEEGIEGLVHVSEVSTERIKTPVG 511 Query: 494 VLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKA 553 VG E+ A+ V+ R I LS++ D D+K + S A E + Sbjct: 512 QYEVGAELTARVMNVNADERKIGLSIKRLDVEDDKTLLKDYVDNSRGTTS--AFGELLRE 569 >UniRef50_B6AR90 Ribosomal protein S1 n=1 Tax=Leptospirillum sp. Group II '5-way CG' RepID=B6AR90_9BACT Length = 591 Score = 499 bits (1284), Expect = e-139, Method: Composition-based stats. Identities = 245/556 (44%), Positives = 358/556 (64%), Gaps = 8/556 (1%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEI 62 E +L+ ++L+ GS+V G V+ I + V+VD G KSE I +F + + + Sbjct: 31 EEMDRLYADTLR--NLDEGSVVEGRVIEIYPNEVVVDIGYKSEGHISKSEFSEEEIQ-AL 87 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 +V D + V L+ ED G +LS+EKA R + W +E+ + ++ + G I ++KGG TV Sbjct: 88 KVDDIIHVYLEEREDVNGNLVLSKEKADRMKVWDAIEEQFNRSDVIEGRIISRIKGGMTV 147 Query: 123 ELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 ++ G++AFLPGS +D+RPVRD L G+ ++ ++IK+++KR N++VSRR ++E + Sbjct: 148 DV-GLKAFLPGSQIDLRPVRDMDRLIGQTIQVRIIKMNKKRGNIIVSRRVLLEEWRDRRK 206 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 ++ L+EG ++GIVKN+TDYGAF+DLGG+DGLLHITDM+W RV +P E +NVGD++ Sbjct: 207 KVTMDALKEGEILEGIVKNITDYGAFIDLGGIDGLLHITDMSWGRVTNPQEFMNVGDKVN 266 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 V VLK D+E RVSLGLKQL DPW + RYPEGT++ RV ++TDYG F+EIE G+EG Sbjct: 267 VVVLKHDKETGRVSLGLKQLTPDPWTTVGTRYPEGTRVNARVVSITDYGAFLEIEPGIEG 326 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHN 362 L+HV+EM W ++ HPSK+++VGD +EV VL IDE+ R+ISLGLKQ NPW + Sbjct: 327 LMHVTEMSWNHEVKHPSKIMSVGDTIEVQVLKIDEKNRKISLGLKQLGPNPWDDVETKYP 386 Query: 363 KGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQV 422 G V GKIKS+TDFG F+GLD GIDGL+H+SD+SW +KKG ++ VVL++ Sbjct: 387 VGAVVSGKIKSLTDFGAFVGLDEGIDGLIHISDMSWTKHVRHPSEVFKKGQKVEVVVLKI 446 Query: 423 DAERERISLGVKQLAEDPFN-NWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRAS 481 + ER+R+SLG KQ++EDP++ + + G+ + G VT V G VELA+G+EG + S Sbjct: 447 EKERQRLSLGFKQVSEDPWDSDIPSRFPVGSFLDGVVTKVMDFGFFVELAEGIEGLVHVS 506 Query: 482 EASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDAN 541 E + + V G + + +D R I LS++A +A VN Q Sbjct: 507 EVDLESGQRLDQVYQPGMSLPVRVIKLDPAERKIGLSMKAVSADSPLEAAPAVNAQPA-- 564 Query: 542 FSNNAMAEAFKAAKGE 557 NAM EA K+A+ + Sbjct: 565 -PGNAMEEALKSARKK 579 >UniRef50_Q48082 30S ribosomal protein S1 n=129 Tax=Proteobacteria RepID=RS1_HAEIN Length = 549 Score = 494 bits (1271), Expect = e-138, Method: Composition-based stats. Identities = 435/557 (78%), Positives = 489/557 (87%), Gaps = 8/557 (1%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL 60 M+ESFAQLFEESLK +ETR GSIV G VVAI K VLVDAGLKSESAIP +F NAQGEL Sbjct: 1 MSESFAQLFEESLKVLETRQGSIVSGTVVAIQKGFVLVDAGLKSESAIPVAEFLNAQGEL 60 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 EIQVGD V+VALDAVEDGFGET LSREKA RHE+WI LEKAYE+ TV G+I GKVKGGF Sbjct: 61 EIQVGDTVNVALDAVEDGFGETKLSREKAVRHESWIELEKAYEEKATVIGLIXGKVKGGF 120 Query: 121 TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 TVELNG+RAFLPGSLVD RP R+ HL GKELEFKVIKLDQKRNNVVVSRRAVIESENS Sbjct: 121 TVELNGVRAFLPGSLVDTRPAREADHLLGKELEFKVIKLDQKRNNVVVSRRAVIESENSQ 180 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 ER+Q+LENL EG EVKG+VKNLT+YGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE Sbjct: 181 EREQVLENLVEGSEVKGVVKNLTEYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 Query: 241 ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV 300 +TVKVLKFD++RTRVSLGLKQLG+DPW AIA+ +P +KLTG+VTNLTDYGCFVEI +GV Sbjct: 241 VTVKVLKFDKDRTRVSLGLKQLGQDPWAAIAENHPVNSKLTGKVTNLTDYGCFVEILDGV 300 Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAET 360 EGLVHVSEMDWTNKNIHPSKVV++GD VEVMVL+IDEERRRISLGLKQCKANPW QFA+T Sbjct: 301 EGLVHVSEMDWTNKNIHPSKVVSLGDTVEVMVLEIDEERRRISLGLKQCKANPWTQFADT 360 Query: 361 HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL 420 HNKGD+V GKIKSITDFGIFIGL+GGIDGLVHLSDISW+++GEEAVR+YKKGDE++AVVL Sbjct: 361 HNKGDKVTGKIKSITDFGIFIGLEGGIDGLVHLSDISWSISGEEAVRQYKKGDEVSAVVL 420 Query: 421 QVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRA 480 VDA +ERISLG+KQL EDPFNN+VA+NKKGA+V+ V DAKGA VELA GVEGY+ Sbjct: 421 AVDAVKERISLGIKQLEEDPFNNFVAINKKGAVVSATVVEADAKGAKVELAGGVEGYI-- 478 Query: 481 SEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDA 540 R D T ++VGD VEAK+TGVDRK+R + LSV+AKD+A+E A+A+VN +++ Sbjct: 479 ------RSADLTSEVAVGDVVEAKYTGVDRKSRIVHLSVKAKDQAEEAAAVASVNNKQED 532 Query: 541 NFSNNAMAEAFKAAKGE 557 NAMAEAFKAAKGE Sbjct: 533 IVIPNAMAEAFKAAKGE 549 >UniRef50_D2R4L6 Ribosomal protein S1 n=7 Tax=Planctomycetales RepID=D2R4L6_9PLAN Length = 600 Score = 491 bits (1264), Expect = e-137, Method: Composition-based stats. Identities = 216/514 (42%), Positives = 329/514 (64%), Gaps = 9/514 (1%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVE 76 E IV G V+ + +VLVD G KSE +IP +++ +GE QVG V V ++ +E Sbjct: 40 EFDVNKIVEGRVLRVADGMVLVDIGFKSEGSIPLDEW--EEGEEPPQVGQLVRVLIEDLE 97 Query: 77 DGF------GETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAF 130 D G +S+ KAK+ +AW + ++ + VTG ++ K+KGG V++ G+ F Sbjct: 98 DETAAPEDGGMVRISKRKAKKLDAWKEMMDRIKEGQVVTGTVSRKIKGGLLVDIEGVNVF 157 Query: 131 LPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQ 190 LP S VD+R D G+ ++ +V+K+D+ R N+VVSRR++IE + +R+ LL+ L+ Sbjct: 158 LPASQVDIRRPADIGDYIGRTVQCEVLKIDEARRNIVVSRRSLIERQREEDREALLKELE 217 Query: 191 EGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDR 250 G KG+VKN+ ++GAFVDLGG+DGLLHITDM+W+R+ HPSE+V + EI V VL DR Sbjct: 218 IGQVRKGVVKNIAEFGAFVDLGGIDGLLHITDMSWERIGHPSEMVAIDQEIEVMVLHIDR 277 Query: 251 ERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMD 310 E+ +++LGLKQ +PW + +YP GT + G V N+ YG FV++E G+EGLVH+SEM Sbjct: 278 EKKKIALGLKQKEGNPWADVDTKYPVGTVVKGSVVNVMSYGAFVKLEPGIEGLVHISEMS 337 Query: 311 WTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGK 370 WT + HPS++VN+GD + V++L +D++ +++SLG+KQ + NPW + AE + VEGK Sbjct: 338 WTRRVNHPSELVNIGDEISVVILGVDKDGQQLSLGMKQTQENPWTRVAEKYPVDTIVEGK 397 Query: 371 IKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERIS 430 ++++T++G F+ L+ GIDGL+H+SD+SW +KG + +L VD ER RI+ Sbjct: 398 VRNLTNYGAFVELEEGIDGLLHVSDMSWTRKISHPSEMLEKGQPVRCKILSVDQERRRIA 457 Query: 431 LGVKQLAEDPFNNWVA-LNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVE 489 LG+KQL EDP+ + + G +V+G VT + G V L DG+EG L SE + +VE Sbjct: 458 LGLKQLDEDPWARDIPGKYQPGQVVSGAVTKITNFGVFVGLEDGLEGLLHISELADHKVE 517 Query: 490 DATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKD 523 + V+ VGD+++ K VD R I LS + + Sbjct: 518 NPEDVVKVGDKIDVKILRVDIDERKIGLSRKRVE 551 Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 106/359 (29%), Positives = 179/359 (49%), Gaps = 23/359 (6%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA---QG 58 E L +E G + +GVV I + VD G + + Sbjct: 206 EEDREALLKE------LEIGQVRKGVVKNIAEFGAFVDLGG-IDGLLHITDMSWERIGHP 258 Query: 59 ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 + + E++V + ++ + L ++ + + W ++ Y V G + + Sbjct: 259 SEMVAIDQEIEVMVLHIDREKKKIALGLKQKEGNP-WADVDTKYPVGTVVKGSVVNVMSY 317 Query: 119 GFTVELN-GIRAFLPGSLVD-VRPVRDTLHLE--GKELEFKVIKLDQKRNNVVVSRRAVI 174 G V+L GI + S + R V L G E+ ++ +D+ + + + Sbjct: 318 GAFVKLEPGIEGLVHISEMSWTRRVNHPSELVNIGDEISVVILGVDKDGQQLSLGMKQT- 376 Query: 175 ESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKR-VKHPS 232 ++ E V+G V+NLT+YGAFV+L G+DGLLH++DM+W R + HPS Sbjct: 377 ---QENPWTRVAEKYPVDTIVEGKVRNLTNYGAFVELEEGIDGLLHVSDMSWTRKISHPS 433 Query: 233 EIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPW-VAIAKRYPEGTKLTGRVTNLTDYG 291 E++ G + K+L D+ER R++LGLKQL EDPW I +Y G ++G VT +T++G Sbjct: 434 EMLEKGQPVRCKILSVDQERRRIALGLKQLDEDPWARDIPGKYQPGQVVSGAVTKITNFG 493 Query: 292 CFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCK 350 FV +E+G+EGL+H+SE+ +K +P VV VGD ++V +L +D + R+I L K+ + Sbjct: 494 VFVGLEDGLEGLLHISELAD-HKVENPEDVVKVGDKIDVKILRVDIDERKIGLSRKRVE 551 Score = 238 bits (607), Expect = 5e-61, Method: Composition-based stats. Identities = 99/390 (25%), Positives = 164/390 (42%), Gaps = 24/390 (6%) Query: 173 VIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHP 231 E + V+G V + D VD+G +G + + + W+ + P Sbjct: 25 ADFEEQGLDPVDGGGEFDVNKIVEGRVLRVADGMVLVDIGFKSEGSIPLDE--WEEGEEP 82 Query: 232 SEIVNVGDEITVKVLKFDRER------TRVSLG-LKQLGEDPWVAIAKRYPEGTKLTGRV 284 VG + V + + E V + K D W + R EG +TG V Sbjct: 83 P---QVGQLVRVLIEDLEDETAAPEDGGMVRISKRKAKKLDAWKEMMDRIKEGQVVTGTV 139 Query: 285 TNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISL 344 + G V+IE GV + S++ + +G V+ VL IDE RR I + Sbjct: 140 SRKIKGGLLVDIE-GVNVFLPASQV-DIRRPADIGDY--IGRTVQCEVLKIDEARRNIVV 195 Query: 345 GLKQC----KANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNV 400 + + + + G +G +K+I +FG F+ L GGIDGL+H++D+SW Sbjct: 196 SRRSLIERQREEDREALLKELEIGQVRKGVVKNIAEFGAFVDL-GGIDGLLHITDMSWER 254 Query: 401 AGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTA 460 G EI +VL +D E+++I+LG+KQ +P+ + G +V G V Sbjct: 255 IG-HPSEMVAIDQEIEVMVLHIDREKKKIALGLKQKEGNPWADVDTKYPVGTVVKGSVVN 313 Query: 461 VDAKGATVELADGVEGYLRASEASR-DRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSV 519 V + GA V+L G+EG + SE S RV + ++++GDE+ GVD+ + +SL + Sbjct: 314 VMSYGAFVKLEPGIEGLVHISEMSWTRRVNHPSELVNIGDEISVVILGVDKDGQQLSLGM 373 Query: 520 RAKDEADEKDAIATVNKQEDANFSNNAMAE 549 + E + Sbjct: 374 KQTQENPWTRVAEKYPVDTIVEGKVRNLTN 403 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 25/167 (14%), Positives = 58/167 (34%), Gaps = 7/167 (4%) Query: 16 IETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN----AQGELEIQVGDEVDVA 71 + +IV G V + V+ + + + ++ G V Sbjct: 386 EKYPVDTIVEGKVRNLTNYGAFVELEEGIDGLLHVSDMSWTRKISHPSEMLEKGQPVRCK 445 Query: 72 LDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL-NGIRAF 130 + +V+ L ++ + Y+ + V+G + G V L +G+ Sbjct: 446 ILSVDQERRRIALGLKQLDEDPWARDIPGKYQPGQVVSGAVTKITNFGVFVGLEDGLEGL 505 Query: 131 LPGSLVDVRPVRDTLH--LEGKELEFKVIKLDQKRNNVVVSRRAVIE 175 L S + V + G +++ K++++D + +SR+ V Sbjct: 506 LHISELADHKVENPEDVVKVGDKIDVKILRVDIDERKIGLSRKRVEW 552 >UniRef50_C9RMY1 Ribosomal protein S1 n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RMY1_FIBSS Length = 590 Score = 490 bits (1262), Expect = e-137, Method: Composition-based stats. Identities = 227/533 (42%), Positives = 334/533 (62%), Gaps = 3/533 (0%) Query: 18 TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVED 77 G +V G + ++ VLVD KSE I +FK+ +++G E++V ++ +ED Sbjct: 41 LEQGKLVTGKISQVNDQEVLVDVNYKSEGVIDRAEFKDT---DSLELGSEIEVFVEKLED 97 Query: 78 GFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVD 137 G +LS++KA W + A+E+ E V G + ++KGG V+L GI AFLPGS +D Sbjct: 98 EDGRLILSKQKADFVRVWDRIHAAFENNEVVRGTLTKRIKGGVVVDLFGIDAFLPGSQID 157 Query: 138 VRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKG 197 +R + D L G+E + KVIK+++ R N+VVSRR V+E E + +R +LE L++ KG Sbjct: 158 LRQIPDINALIGQEFDLKVIKVNKARRNIVVSRRVVLEEERNKQRGDVLETLEKNQVRKG 217 Query: 198 IVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSL 257 IVKN+TD+GAF+DLGGVDGLLHITDM++KR+ HPSE++ +G E+ V VL F+ ++ R+SL Sbjct: 218 IVKNITDFGAFIDLGGVDGLLHITDMSYKRINHPSEMLQLGQEVEVMVLDFNDKKERISL 277 Query: 258 GLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIH 317 G+KQL PW IA+RYPEG + G+V ++TDYG FVE++ GVEGL+HVSEM WT H Sbjct: 278 GMKQLKPHPWKDIAERYPEGAIVKGKVVSITDYGAFVELDSGVEGLIHVSEMSWTQHVKH 337 Query: 318 PSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDF 377 PSK++ VG VE +VL ++E+ RISLG+KQ +++PW G RV G+I++I F Sbjct: 338 PSKILTVGQEVEAVVLKVEEDAERISLGMKQLESDPWDSIETELPPGARVVGEIRNIASF 397 Query: 378 GIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLA 437 G F+ + G+DGL+H+SD+SW KKGD++ VVL VD E+ RISL +K L Sbjct: 398 GAFVEIKEGVDGLIHVSDMSWTKKITHPNEMVKKGDKVECVVLAVDKEKRRISLSMKHLT 457 Query: 438 EDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSV 497 EDP+++ + + V GK+ + +G VELADG+EG++ S+ + + ++ V Sbjct: 458 EDPWDSIDSTYPVDSEVKGKIVRMLDRGVVVELADGIEGFIPVSKLTAEYIKVPADAFKV 517 Query: 498 GDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEA 550 GDEV A T +D+ NR I LSV + E + + + EA Sbjct: 518 GDEVPAVVTEIDQNNRKIYLSVVDYFKNRESAELKAWMDSHKPGENGTTIGEA 570 Score = 305 bits (781), Expect = 3e-81, Method: Composition-based stats. Identities = 132/457 (28%), Positives = 236/457 (51%), Gaps = 17/457 (3%) Query: 99 EKAYEDAETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRPVRDTLHLEGKELEFKVI 157 E + VTG I+ V++N + + + G E+E V Sbjct: 38 MGCLEQGKLVTGKISQVNDQEVLVDVNYKSEGVIDRAEFKDTDSLEL----GSEIEVFVE 93 Query: 158 KLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGL 217 KL+ + +++S++ EN V+G + G VDL G+D Sbjct: 94 KLEDEDGRLILSKQKADFVRVWDRIHAAFEN---NEVVRGTLTKRIKGGVVVDLFGIDAF 150 Query: 218 LHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGED----PWVAIAKR 273 L + + +++ + + +G E +KV+K ++ R + + + + E+ + + Sbjct: 151 LPGSQIDLRQIPDINAL--IGQEFDLKVIKVNKARRNIVVSRRVVLEEERNKQRGDVLET 208 Query: 274 YPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVL 333 + G V N+TD+G F+++ GV+GL+H+++M + + HPS+++ +G VEVMVL Sbjct: 209 LEKNQVRKGIVKNITDFGAFIDLG-GVDGLLHITDMSY-KRINHPSEMLQLGQEVEVMVL 266 Query: 334 DIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHL 393 D ++++ RISLG+KQ K +PW+ AE + +G V+GK+ SITD+G F+ LD G++GL+H+ Sbjct: 267 DFNDKKERISLGMKQLKPHPWKDIAERYPEGAIVKGKVVSITDYGAFVELDSGVEGLIHV 326 Query: 394 SDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAI 453 S++SW + + G E+ AVVL+V+ + ERISLG+KQL DP+++ GA Sbjct: 327 SEMSWTQHVKHPSKILTVGQEVEAVVLKVEEDAERISLGMKQLESDPWDSIETELPPGAR 386 Query: 454 VTGKVTAVDAKGATVELADGVEGYLRASEASR-DRVEDATLVLSVGDEVEAKFTGVDRKN 512 V G++ + + GA VE+ +GV+G + S+ S ++ ++ GD+VE VD++ Sbjct: 387 VVGEIRNIASFGAFVEIKEGVDGLIHVSDMSWTKKITHPNEMVKKGDKVECVVLAVDKEK 446 Query: 513 RAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAE 549 R ISLS++ E +T + M + Sbjct: 447 RRISLSMKHLTEDPWDSIDSTYPVDSEVKGKIVRMLD 483 Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats. Identities = 95/363 (26%), Positives = 175/363 (48%), Gaps = 20/363 (5%) Query: 16 IETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE---IQVGDEVDVAL 72 + +G+V I +D G + + + +Q+G EV+V + Sbjct: 207 ETLEKNQVRKGIVKNITDFGAFIDLGG-VDGLLHITDMSYKRINHPSEMLQLGQEVEVMV 265 Query: 73 DAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFL 131 D L ++ + W + + Y + V G + G VEL+ G+ + Sbjct: 266 LDFNDKKERISLGMKQL-KPHPWKDIAERYPEGAIVKGKVVSITDYGAFVELDSGVEGLI 324 Query: 132 PGSLVD-VRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLEN 188 S + + V+ + G+E+E V+K+++ + + + + S D + Sbjct: 325 HVSEMSWTQHVKHPSKILTVGQEVEAVVLKVEEDAERISLGMKQL----ESDPWDSIETE 380 Query: 189 LQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAW-KRVKHPSEIVNVGDEITVKVL 246 L G V G ++N+ +GAFV++ GVDGL+H++DM+W K++ HP+E+V GD++ VL Sbjct: 381 LPPGARVVGEIRNIASFGAFVEIKEGVDGLIHVSDMSWTKKITHPNEMVKKGDKVECVVL 440 Query: 247 KFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHV 306 D+E+ R+SL +K L EDPW +I YP +++ G++ + D G VE+ +G+EG + V Sbjct: 441 AVDKEKRRISLSMKHLTEDPWDSIDSTYPVDSEVKGKIVRMLDRGVVVELADGIEGFIPV 500 Query: 307 SEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN----PWQQFAETHN 362 S++ P+ VGD V +V +ID+ R+I L + N + + ++H Sbjct: 501 SKLTAEY-IKVPADAFKVGDEVPAVVTEIDQNNRKIYLSVVDYFKNRESAELKAWMDSHK 559 Query: 363 KGD 365 G+ Sbjct: 560 PGE 562 Score = 53.8 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 40/111 (36%), Gaps = 5/111 (4%) Query: 4 SFAQLFEESLKEIE--TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE-- 59 S L E+ I+ S V+G +V + V+V+ E IP + + Sbjct: 452 SMKHLTEDPWDSIDSTYPVDSEVKGKIVRMLDRGVVVELADGIEGFIPVSKLTAEYIKVP 511 Query: 60 -LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVT 109 +VGDEV + ++ + LS ++ L+ + + Sbjct: 512 ADAFKVGDEVPAVVTEIDQNNRKIYLSVVDYFKNRESAELKAWMDSHKPGE 562 >UniRef50_B3E440 Ribosomal protein S1 n=3 Tax=Deltaproteobacteria RepID=B3E440_GEOLS Length = 573 Score = 487 bits (1255), Expect = e-136, Method: Composition-based stats. Identities = 255/553 (46%), Positives = 355/553 (64%), Gaps = 6/553 (1%) Query: 2 TESFAQLFEESLKEIE-TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL 60 + FA+LF SLKE E I+ G VV +D D VLVD G KSE +P +F++A+G + Sbjct: 20 SNEFAELFSASLKEQERPERDKILEGTVVRVDPDTVLVDVGRKSEGFVPISEFRDAEGNV 79 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 + VGD+V V V G S+++A + AW T+ +A + + G I K GGF Sbjct: 80 SVSVGDKVKV----VSSRDGGNKFSKKRADQMAAWETIHEAGGEGAVLEGTIIAKTNGGF 135 Query: 121 TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 TV + GI AFLP S VD RP + G +FKVI L+QKR N+V+SRRA++E E + Sbjct: 136 TVAIGGINAFLPASQVDTRPSGNGDAYIGVAGQFKVISLNQKRGNIVLSRRALLEEERAE 195 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 R LE L EG ++G+VKNLT+YGAFVDLGGVDGLLH+TD++W RV P++++ G E Sbjct: 196 SRKATLEKLSEGQIMQGVVKNLTEYGAFVDLGGVDGLLHVTDISWGRVGKPADVLKPGQE 255 Query: 241 ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV 300 + VK+LKFDRE+ +VS+G+KQ DPW IA R+PEGT+++G+V +L DYG F+E+E G+ Sbjct: 256 VNVKILKFDREKGKVSVGIKQTLPDPWQDIANRFPEGTRVSGKVVSLMDYGAFIELESGI 315 Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAET 360 EGLVHVSEM WT + + ++NVGD V+V+VL +D + R+ISLGLKQ NPWQ AE Sbjct: 316 EGLVHVSEMSWTKRVRKAADMLNVGDQVDVVVLGVDLQNRKISLGLKQVNDNPWQSIAER 375 Query: 361 HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL 420 + G ++EG+IK++TDFG+FIG++ GIDGLVH+SDISW + Y KGD + AVVL Sbjct: 376 YPVGTKLEGQIKNMTDFGMFIGIEEGIDGLVHVSDISWTKRVKHPGDVYSKGDLVQAVVL 435 Query: 421 QVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRA 480 +VD + ER+SLG+KQL DP++ G + GKV + G VE+ +G+EG + Sbjct: 436 KVDPQNERVSLGIKQLTPDPWSLVPQKYAPGTRLVGKVASTTDFGVFVEIEEGIEGLIHV 495 Query: 481 SEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDA 540 SE SR++V A VGD +EA D + R ISLSV++ A EK + Sbjct: 496 SELSREKVPSAKDFAIVGDSIEAVVLNADSRERRISLSVKSLAAAAEKAEFESYLGGGQG 555 Query: 541 NFSNNAMAEAFKA 553 ++N + + K+ Sbjct: 556 EATSN-LGDLLKS 567 Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats. Identities = 102/404 (25%), Positives = 182/404 (45%), Gaps = 22/404 (5%) Query: 153 EFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG 212 E K + +D +V E +++ ++Q ++G V + VD+G Sbjct: 3 EVKRLNVDTDDMDVEHQSNEFAELFSASLKEQERPERD--KILEGTVVRVDPDTVLVDVG 60 Query: 213 GV-DGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGED-PWVAI 270 +G + I++ V+VGD++ V V D K+ + W I Sbjct: 61 RKSEGFVPISEFRDAEGNV---SVSVGDKVKV-VSSRDGGNK---FSKKRADQMAAWETI 113 Query: 271 AKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEV 330 + EG L G + T+ G V I G+ + S++D + + G Sbjct: 114 HEAGGEGAVLEGTIIAKTNGGFTVAIG-GINAFLPASQVDTRPSGNGDAYIGVAGQ---F 169 Query: 331 MVLDIDEERRRISLGLKQCKANPWQQFA----ETHNKGDRVEGKIKSITDFGIFIGLDGG 386 V+ ++++R I L + + E ++G ++G +K++T++G F+ L GG Sbjct: 170 KVISLNQKRGNIVLSRRALLEEERAESRKATLEKLSEGQIMQGVVKNLTEYGAFVDL-GG 228 Query: 387 IDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVA 446 +DGL+H++DISW G+ K G E+ +L+ D E+ ++S+G+KQ DP+ + Sbjct: 229 VDGLLHVTDISWGRVGK-PADVLKPGQEVNVKILKFDREKGKVSVGIKQTLPDPWQDIAN 287 Query: 447 LNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASR-DRVEDATLVLSVGDEVEAKF 505 +G V+GKV ++ GA +EL G+EG + SE S RV A +L+VGD+V+ Sbjct: 288 RFPEGTRVSGKVVSLMDYGAFIELESGIEGLVHVSEMSWTKRVRKAADMLNVGDQVDVVV 347 Query: 506 TGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAE 549 GVD +NR ISL ++ ++ + M + Sbjct: 348 LGVDLQNRKISLGLKQVNDNPWQSIAERYPVGTKLEGQIKNMTD 391 >UniRef50_Q6NDP1 30S ribosomal protein S1 n=165 Tax=Proteobacteria RepID=RS1_RHOPA Length = 565 Score = 487 bits (1254), Expect = e-136, Method: Composition-based stats. Identities = 265/552 (48%), Positives = 382/552 (69%), Gaps = 2/552 (0%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEI 62 + FA + +ES + S+++G VVAI+KD+ ++D GLK+E +P +F + EI Sbjct: 12 DDFAAMLDESFAGGNLQESSVIKGKVVAIEKDMAVIDVGLKTEGRVPLREFAGPGRDNEI 71 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 +VGD V+V LD +E+ GE +LSR+KA+R E+W LEKA+++ E V GVI +VKGGFTV Sbjct: 72 KVGDTVEVFLDRIENALGEAVLSRDKARREESWGKLEKAFQNNEKVFGVIFNQVKGGFTV 131 Query: 123 ELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 +L+G AFLP S VD+RP+RD L F+++K+D++R N+VVSRR V+E + +R Sbjct: 132 DLDGAVAFLPRSQVDIRPIRDVAPLMNNSQPFQILKMDRRRGNIVVSRRTVLEETRAEQR 191 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 +L++NL+EG + G+VKN+TDYGAFVDLGG+DGLLH+TD+AW+RV HP+E++ +G + Sbjct: 192 QELVQNLEEGQVIDGVVKNITDYGAFVDLGGIDGLLHVTDIAWRRVNHPTEVLTIGQTVK 251 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 VK++K + E R+SLG+KQL +DPW I +YP + TGRVTN+TDYG FVE+E G+EG Sbjct: 252 VKIIKINHETHRISLGMKQLLDDPWQGIEAKYPLNARFTGRVTNITDYGAFVELEPGIEG 311 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHN 362 L+HVSEM WT KN+HP K+V+ VEV VL++D +RRISLGLKQ NPW+ F E H Sbjct: 312 LIHVSEMSWTKKNMHPGKIVSTSQEVEVQVLEVDSVKRRISLGLKQTMRNPWEVFVEKHP 371 Query: 363 KGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQV 422 G VEG++K+ T+FG+F+GLDG +DG+VHLSD+ W + GE+ + +KKGD + AVVL V Sbjct: 372 VGSTVEGEVKNKTEFGLFLGLDGDVDGMVHLSDLDWKLPGEQVIDNFKKGDMVKAVVLDV 431 Query: 423 DAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVEL-ADGVEGYLRAS 481 D E+ERISLGVKQL DPF KKGA+VT +V V G V++ +++ S Sbjct: 432 DVEKERISLGVKQLEGDPFAEPGD-VKKGAVVTCEVLDVKESGIDVQIVGTDFNTFIKRS 490 Query: 482 EASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDAN 541 E +RDR + + +VG++V+A+ D+K R + +S++A + A+EK+AIA + Sbjct: 491 ELARDRNDQRSDRFAVGEKVDARVIQFDKKARKVQVSIKALEVAEEKEAIAQYGSSDSGA 550 Query: 542 FSNNAMAEAFKA 553 + + A K Sbjct: 551 TLGDILGTALKQ 562 >UniRef50_C1A406 30S ribosomal protein S1 n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A406_GEMAT Length = 585 Score = 478 bits (1231), Expect = e-133, Method: Composition-based stats. Identities = 218/545 (40%), Positives = 338/545 (62%), Gaps = 5/545 (0%) Query: 2 TESFAQLFEESL-KEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL 60 ++ + ++ E G IV+ V+ I +++V++D G KSE IP E+FK+ Sbjct: 43 SDEYERMLELYNGTLASIEEGEIVKAHVLEIRENLVVLDIGFKSEGTIPLEEFKDMP--- 99 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 +++ GDEV+V L+ +ED G +LS++KA W + AYE + V G + K+KGG Sbjct: 100 DLKAGDEVEVLLEHLEDQEGSVVLSKKKADFMRVWERIRVAYESDQPVEGTLVKKIKGGV 159 Query: 121 TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 V+L G+ AFLPGS + +R V + L G++ EFK+IKL+++R N+VVSRR ++E+E + Sbjct: 160 VVDLMGVDAFLPGSQIALRRVPNIDELLGQKYEFKIIKLNKRRRNIVVSRRVILETERAG 219 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 +R++L++ L + KG+VKN+TD+GAF+DLGGVDGLLHITDM+W R+ HPSE+V +G E Sbjct: 220 KREKLMKELAKDQVRKGVVKNITDFGAFIDLGGVDGLLHITDMSWGRISHPSEMVQIGME 279 Query: 241 ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV 300 + +KVL D ER R+SLGLKQL PW +A +YP GT+++G+V ++T+YG F+E+E G+ Sbjct: 280 LEIKVLDIDWERERISLGLKQLQSYPWKDVAAKYPVGTRVSGKVVSITNYGAFIELEPGI 339 Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAET 360 EGLVH+SEM WT HPSK+V++G+ +E +VL +DE +ISLG+KQ + +PW Sbjct: 340 EGLVHISEMSWTRNVRHPSKIVSIGEAIEAVVLKVDETEEKISLGMKQTEQDPWVILPLK 399 Query: 361 HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL 420 + G R+ GK++++T FG F+ ++ GIDGL+H+SD+SW + KKGD + V+L Sbjct: 400 YPVGTRINGKVRNLTSFGAFVEIEPGIDGLIHISDMSWTKRVQHPSEVVKKGDAVDVVIL 459 Query: 421 QVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRA 480 +D+E +RISLG+KQ EDP+ G + GKV + KG V+L + +EG++ Sbjct: 460 NIDSENKRISLGLKQAEEDPWLRIGETYPVGTELPGKVVRLMDKGVVVDLGNDIEGFVPV 519 Query: 481 SEASRDR-VEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQED 539 S+ + + V + + VD +R I L+V + E Sbjct: 520 SQLNPEGTVTNPADFTYEAMNFVMRVLEVDPIHRRIVLAVTSIPEEQPPKPAEPSKVHSS 579 Query: 540 ANFSN 544 + Sbjct: 580 EDELG 584 Score = 148 bits (373), Expect = 7e-34, Method: Composition-based stats. Identities = 51/283 (18%), Positives = 106/283 (37%), Gaps = 17/283 (6%) Query: 272 KRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVM 331 EG + V + + ++I EG + + E + GD VEV+ Sbjct: 58 ASIEEGEIVKAHVLEIRENLVVLDIGFKSEGTIPLEEFKDMPD-------LKAGDEVEVL 110 Query: 332 VLDIDEERRRISLGLKQCKANP-WQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGL 390 + ++++ + L K+ W++ + VEG + G+ + L G+D Sbjct: 111 LEHLEDQEGSVVLSKKKADFMRVWERIRVAYESDQPVEGTLVKKIKGGVVVDLM-GVDAF 169 Query: 391 VHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPF----NNWVA 446 + S I+ G + +++++ R I + + + E + Sbjct: 170 LPGSQIALRRVP-NIDELL--GQKYEFKIIKLNKRRRNIVVSRRVILETERAGKREKLMK 226 Query: 447 LNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFT 506 K + G V + GA ++L GV+G L ++ S R+ + ++ +G E+E K Sbjct: 227 ELAKDQVRKGVVKNITDFGAFIDLG-GVDGLLHITDMSWGRISHPSEMVQIGMELEIKVL 285 Query: 507 GVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAE 549 +D + ISL ++ KD A + ++ Sbjct: 286 DIDWERERISLGLKQLQSYPWKDVAAKYPVGTRVSGKVVSITN 328 >UniRef50_B3QSU3 Ribosomal protein S1 n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QSU3_CHLT3 Length = 616 Score = 478 bits (1230), Expect = e-133, Method: Composition-based stats. Identities = 223/539 (41%), Positives = 335/539 (62%), Gaps = 5/539 (0%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEI 62 + L+ +L E+ IV+G VV+I + V +D GLKSE + +F+N E+ Sbjct: 36 KEMEALYSSTLNELNEEE--IVKGRVVSISEKDVTIDVGLKSEGIVQLIEFQNP---EEL 90 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 + GD+V+V L+++ED G+ +LS+ KA W + + E ++G I +VKGG TV Sbjct: 91 KEGDDVEVFLESIEDKMGQLILSKRKADVMRIWEKIYDSLEKGTIISGKIIARVKGGMTV 150 Query: 123 ELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 L+G+ AFLPGS +DV+PVRD L G+ ++F+V+K++ N+VVS + ++E E A R Sbjct: 151 SLSGVEAFLPGSQIDVKPVRDFDALVGQTMDFRVVKINPLTQNIVVSHKVILEEEYEARR 210 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 ++L N++ GM ++G VKN+TD+G FVDLGG+DGL+HITD+ W R+ HPSE VN+ D I Sbjct: 211 KEMLANIKVGMVLEGTVKNITDFGIFVDLGGLDGLVHITDITWGRISHPSEAVNLDDPIK 270 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 V V+ +D ++ RVSLG+KQL PW I ++YP GT++TG+V ++TDYG FVEIE+G+EG Sbjct: 271 VVVIGYDADKQRVSLGMKQLTPHPWENIEEKYPAGTRVTGKVVSITDYGAFVEIEKGIEG 330 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHN 362 LVH+SEM WT HP++ V +G VE ++L+ID+E ++SL +KQ + +PW AE + Sbjct: 331 LVHISEMSWTQHIKHPNQFVTMGQEVECVILNIDKEHTKLSLSMKQTEEDPWIVLAEKYP 390 Query: 363 KGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQV 422 +G +++ITDFG+F+ L+ G+DGLVH+SD+SW KK E+ VL+ Sbjct: 391 VDSEHKGIVRNITDFGVFVELESGVDGLVHISDLSWTKKIRHPSEIVKKNQELDVKVLKF 450 Query: 423 DAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASE 482 D + RI+LG KQ+ DP++++ G GK+ + KG VEL GV+G++ AS Sbjct: 451 DVKARRIALGHKQIEPDPWSDFENDYAVGTETKGKIAQIIEKGVIVELPSGVDGFVPASH 510 Query: 483 ASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDAN 541 + V D VGDE+ K DR+N+ I LS + K+ I KQ Sbjct: 511 LLQGGVRDINASFKVGDELPLKVIEFDRENKRIILSALEYFKGKSKEEIEEYMKQHPKE 569 Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats. Identities = 114/457 (24%), Positives = 214/457 (46%), Gaps = 17/457 (3%) Query: 100 KAYEDAETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIK 158 + E V G + + T+++ + + EG ++E + Sbjct: 47 NELNEEEIVKGRVVSISEKDVTIDVGLKSEGIVQL----IEFQNPEELKEGDDVEVFLES 102 Query: 159 LDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLL 218 ++ K +++S+R +++ ++L++G + G + G V L GV+ L Sbjct: 103 IEDKMGQLILSKRKADVM---RIWEKIYDSLEKGTIISGKIIARVKGGMTVSLSGVEAFL 159 Query: 219 HITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDP----WVAIAKRY 274 + + K V+ + VG + +V+K + + + K + E+ + Sbjct: 160 PGSQIDVKPVRDFDAL--VGQTMDFRVVKINPLTQNIVVSHKVILEEEYEARRKEMLANI 217 Query: 275 PEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLD 334 G L G V N+TD+G FV++ G++GLVH++++ W + HPS+ VN+ D ++V+V+ Sbjct: 218 KVGMVLEGTVKNITDFGIFVDLG-GLDGLVHITDITWG-RISHPSEAVNLDDPIKVVVIG 275 Query: 335 IDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLS 394 D +++R+SLG+KQ +PW+ E + G RV GK+ SITD+G F+ ++ GI+GLVH+S Sbjct: 276 YDADKQRVSLGMKQLTPHPWENIEEKYPAGTRVTGKVVSITDYGAFVEIEKGIEGLVHIS 335 Query: 395 DISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIV 454 ++SW + + G E+ V+L +D E ++SL +KQ EDP+ + Sbjct: 336 EMSWTQHIKHPNQFVTMGQEVECVILNIDKEHTKLSLSMKQTEEDPWIVLAEKYPVDSEH 395 Query: 455 TGKVTAVDAKGATVELADGVEGYLRASEASR-DRVEDATLVLSVGDEVEAKFTGVDRKNR 513 G V + G VEL GV+G + S+ S ++ + ++ E++ K D K R Sbjct: 396 KGIVRNITDFGVFVELESGVDGLVHISDLSWTKKIRHPSEIVKKNQELDVKVLKFDVKAR 455 Query: 514 AISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEA 550 I+L + + D + + E Sbjct: 456 RIALGHKQIEPDPWSDFENDYAVGTETKGKIAQIIEK 492 Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats. Identities = 103/409 (25%), Positives = 182/409 (44%), Gaps = 21/409 (5%) Query: 150 KELEFKVIKLDQKRNNVVVSRR--AVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGA 207 + +E KV +K V E A L L E VKG V ++++ Sbjct: 8 QTVEEKVEPKVKKSKPVKFFADYGEAELKEMEALYSSTLNELNEEEIVKGRVVSISEKDV 67 Query: 208 FVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLG-LKQLGED 265 +D+G +G++ + + ++P E + GD++ V + + + ++ L K Sbjct: 68 TIDVGLKSEGIVQLIE-----FQNPEE-LKEGDDVEVFLESIEDKMGQLILSKRKADVMR 121 Query: 266 PWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVG 325 W I +GT ++G++ G V + GVE + S++ +V G Sbjct: 122 IWEKIYDSLEKGTIISGKIIARVKGGMTVSLS-GVEAFLPGSQI-DVKPVRDFDALV--G 177 Query: 326 DVVEVMVLDIDEERRRISLGLKQCKANPWQ----QFAETHNKGDRVEGKIKSITDFGIFI 381 ++ V+ I+ + I + K ++ + G +EG +K+ITDFGIF+ Sbjct: 178 QTMDFRVVKINPLTQNIVVSHKVILEEEYEARRKEMLANIKVGMVLEGTVKNITDFGIFV 237 Query: 382 GLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPF 441 L GG+DGLVH++DI+W D I VV+ DA+++R+SLG+KQL P+ Sbjct: 238 DL-GGLDGLVHITDITWGRIS-HPSEAVNLDDPIKVVVIGYDADKQRVSLGMKQLTPHPW 295 Query: 442 NNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASR-DRVEDATLVLSVGDE 500 N G VTGKV ++ GA VE+ G+EG + SE S ++ +++G E Sbjct: 296 ENIEEKYPAGTRVTGKVVSITDYGAFVEIEKGIEGLVHISEMSWTQHIKHPNQFVTMGQE 355 Query: 501 VEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAE 549 VE +D+++ +SLS++ +E + + + Sbjct: 356 VECVILNIDKEHTKLSLSMKQTEEDPWIVLAEKYPVDSEHKGIVRNITD 404 Score = 55.4 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 38/105 (36%), Gaps = 3/105 (2%) Query: 15 EIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQF---KNAQGELEIQVGDEVDVA 71 E + G+ +G + I + V+V+ + +PA +VGDE+ + Sbjct: 473 ENDYAVGTETKGKIAQIIEKGVIVELPSGVDGFVPASHLLQGGVRDINASFKVGDELPLK 532 Query: 72 LDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKV 116 + + +LS + + ++ +E+ + I Sbjct: 533 VIEFDRENKRIILSALEYFKGKSKEEIEEYMKQHPKEKQEIQEAT 577 >UniRef50_Q2S1M7 Ribosomal protein S1, putative n=2 Tax=Rhodothermaceae RepID=Q2S1M7_SALRD Length = 871 Score = 474 bits (1220), Expect = e-132, Method: Composition-based stats. Identities = 216/507 (42%), Positives = 325/507 (64%), Gaps = 6/507 (1%) Query: 13 LKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVAL 72 I+ R IV G V+ +++D V++D G KS+ + ++F GE EI GD V+V L Sbjct: 188 ETSIDVREQDIVEGRVLRVNEDYVVIDIGYKSDGIVSRDEF----GEEEIHPGDTVEVYL 243 Query: 73 DAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVE-LNGIRAFL 131 + ED G+ +LS+E+A + W +E+ YE+ E + G I ++KGG VE +G+ AFL Sbjct: 244 ERKEDRDGQLVLSKEQADKVRRWQRVEEIYENEEVIEGTIIRRIKGGMIVELFDGMEAFL 303 Query: 132 PGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQE 191 PGS +DVRPVRD +EFK++KL+ + N+VVS R +IE E +R ++LE L+ Sbjct: 304 PGSQIDVRPVRDFESYLETRMEFKIVKLNPENENIVVSHRELIEHELEEQRQEILEQLEV 363 Query: 192 GMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRE 251 G ++G VKN+ D+G F+DLGGVDGLLHITD++W RV HPSE+V + E+ V VL ++ E Sbjct: 364 GQVLEGTVKNIVDFGVFIDLGGVDGLLHITDLSWGRVSHPSEVVELDQELEVVVLDYEEE 423 Query: 252 RTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDW 311 R R+SLGLKQL + PW I +Y EG + G+V ++T+YG FVEIE+G+EGLVH+SEM W Sbjct: 424 RQRISLGLKQLRDHPWDQIGNKYDEGDVVEGKVVSITNYGAFVEIEKGIEGLVHISEMSW 483 Query: 312 TNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKI 371 T HPS++V++G VV+V +L+ID+E R+ISLG+KQ + +PW+ ++ + G + G + Sbjct: 484 TRHIEHPSQMVSLGQVVDVKILNIDQEERKISLGMKQLEPDPWEGISDRYPAGTVLTGTV 543 Query: 372 KSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISL 431 ++IT+FG+F+ ++ GIDGLVH+SD+SW + E+ V+L +D ER RISL Sbjct: 544 RNITNFGVFVEIEPGIDGLVHVSDLSWTKKIRHPGDMVDEEQELDVVILNIDEERRRISL 603 Query: 432 GVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDA 491 G KQ+ +P++ + ++G TG+V V+ KG V+L VE ++ SE + Sbjct: 604 GHKQVKTNPWDQFADAYEEGNDTTGEVVRVEDKGLVVQLPLDVEAFVPGSELKNGP-KAF 662 Query: 492 TLVLSVGDEVEAKFTGVDRKNRAISLS 518 GDE+E + D+ + I LS Sbjct: 663 KNHYHEGDELELQVIRFDKDQKDIVLS 689 Score = 314 bits (804), Expect = 8e-84, Method: Composition-based stats. Identities = 115/489 (23%), Positives = 223/489 (45%), Gaps = 19/489 (3%) Query: 69 DVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GI 127 V+LD +E + + + + + V G + + +++ Sbjct: 160 TVSLDELETEEQAPADTSVYDQFRDVVDETSIDVREQDIVEGRVLRVNEDYVVIDIGYKS 219 Query: 128 RAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLE 187 + + G +E + + + + +V+S+ + +++ E Sbjct: 220 DGIVSRDEFGEEEIHP-----GDTVEVYLERKEDRDGQLVLSKEQADKVRRWQRVEEIYE 274 Query: 188 NLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVL 246 N ++G + G V+L G++ L + + + V+ + + K++ Sbjct: 275 NE---EVIEGTIIRRIKGGMIVELFDGMEAFLPGSQIDVRPVRDFESYLE--TRMEFKIV 329 Query: 247 KFDRERTRVSLGLKQL----GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 K + E + + ++L E+ I ++ G L G V N+ D+G F+++ GV+G Sbjct: 330 KLNPENENIVVSHRELIEHELEEQRQEILEQLEVGQVLEGTVKNIVDFGVFIDLG-GVDG 388 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHN 362 L+H++++ W + HPS+VV + +EV+VLD +EER+RISLGLKQ + +PW Q ++ Sbjct: 389 LLHITDLSWG-RVSHPSEVVELDQELEVVVLDYEEERQRISLGLKQLRDHPWDQIGNKYD 447 Query: 363 KGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQV 422 +GD VEGK+ SIT++G F+ ++ GI+GLVH+S++SW E + G + +L + Sbjct: 448 EGDVVEGKVVSITNYGAFVEIEKGIEGLVHISEMSWTRHIEHPSQMVSLGQVVDVKILNI 507 Query: 423 DAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASE 482 D E +ISLG+KQL DP+ G ++TG V + G VE+ G++G + S+ Sbjct: 508 DQEERKISLGMKQLEPDPWEGISDRYPAGTVLTGTVRNITNFGVFVEIEPGIDGLVHVSD 567 Query: 483 ASR-DRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDAN 541 S ++ ++ E++ +D + R ISL + + D Sbjct: 568 LSWTKKIRHPGDMVDEEQELDVVILNIDEERRRISLGHKQVKTNPWDQFADAYEEGNDTT 627 Query: 542 FSNNAMAEA 550 + + Sbjct: 628 GEVVRVEDK 636 >UniRef50_Q89AJ3 30S ribosomal protein S1 n=296 Tax=Proteobacteria RepID=RS1_BUCBP Length = 566 Score = 474 bits (1219), Expect = e-132, Method: Composition-based stats. Identities = 393/564 (69%), Positives = 465/564 (82%), Gaps = 8/564 (1%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL 60 MTESFAQLFEESLK I+TRPGSI++G VVAI KD +LVDA LKSES IP +QFKN+QGEL Sbjct: 1 MTESFAQLFEESLKNIKTRPGSIIQGTVVAITKDTILVDAKLKSESKIPIDQFKNSQGEL 60 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 E++VGD++DVALDA+EDGFGETLLSREKAKRHEAW+TLE+AY+D++TV G+INGKVKGGF Sbjct: 61 EVKVGDQIDVALDAIEDGFGETLLSREKAKRHEAWLTLEQAYKDSKTVVGLINGKVKGGF 120 Query: 121 TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 TVEL IRAFLPGSLVD+RPVR+T+HLEGKELEFKVIKLDQKRNNVVVSRRAVIESE +A Sbjct: 121 TVELEDIRAFLPGSLVDIRPVRETMHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEYNA 180 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 ER+ LLE LQEG+ V GIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVN+GDE Sbjct: 181 ERNLLLETLQEGLIVSGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNIGDE 240 Query: 241 ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV 300 + +K+LKFDRE+ RVSLGLKQL +DPW I++RYPE TK+TGRVTNLTDYGCFVEIEEGV Sbjct: 241 VKIKILKFDREKIRVSLGLKQLSDDPWTKISERYPEKTKITGRVTNLTDYGCFVEIEEGV 300 Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAET 360 EGLVHVSEMDWTNKNIHPSK+V V VV+VM+LDIDEERRRISLGLKQCK NPW +F++ Sbjct: 301 EGLVHVSEMDWTNKNIHPSKMVQVNSVVKVMILDIDEERRRISLGLKQCKNNPWMEFSKK 360 Query: 361 HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL 420 +NKG V GKIKSITDFGIFIGL+G IDGLVHLSDISWN++GEE+V++YKKG+E+ AVVL Sbjct: 361 YNKGSHVVGKIKSITDFGIFIGLEGSIDGLVHLSDISWNISGEESVKKYKKGEEVLAVVL 420 Query: 421 QVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRA 480 QVD +RERISLG+KQL EDPF +V+ +KKG++V+G + +D V L++ ++G ++ Sbjct: 421 QVDPDRERISLGIKQLQEDPFAKYVSSHKKGSLVSGTIKKIDNNVIVVSLSEHIDGLIKF 480 Query: 481 SEASRD----RVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNK 536 S + +G+ VE K +D+K R I LS+ K E + I N Sbjct: 481 LNISDEIMNVHDNKPWNKAKIGEIVEVKLNSIDKKERIIYLSILEKQELKISNDIKKNNS 540 Query: 537 Q----EDANFSNNAMAEAFKAAKG 556 + +NAM EAFKAAK Sbjct: 541 HKQEIDKDKNFSNAMTEAFKAAKN 564 >UniRef50_B0VI92 30S ribosomal subunit protein S1 (Modular protein) n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VI92_9BACT Length = 932 Score = 470 bits (1211), Expect = e-131, Method: Composition-based stats. Identities = 215/535 (40%), Positives = 324/535 (60%), Gaps = 8/535 (1%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEI 62 + ++EES + G I+ G VV I V VD G KSE IP +F Sbjct: 100 QEMLSMYEESFSS--FKKGEIIEGTVVDITDKDVRVDIGFKSEGIIPISEFAYTGIPELN 157 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 V + V ++ +E+G G+ LLS++KA +++A+ D +++G+I +VKGG V Sbjct: 158 SV---IKVYINEIENGEGKLLLSKKKADYMINIERIKQAFADKSSLSGIIRRRVKGGMIV 214 Query: 123 ELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 ++ GI AFLPGS + ++P+ + GKEL FKV+ +D++ +N+++SRR V+E E +R Sbjct: 215 DVLGIEAFLPGSQMSLKPIPNLDQFIGKELYFKVVNIDEEHHNIILSRRQVLEEEAEQKR 274 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 +LL +Q E+ G VKN+T YGAF+DLGG+DGLLH+TDM+W ++ HPSE++ +GD++ Sbjct: 275 QELLRKIQIDAELDGEVKNITQYGAFIDLGGIDGLLHLTDMSWGKLNHPSEMLQIGDKVK 334 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 VKV+ FD E R+SLG+KQL PW I +YPEG+++TG+V NL +G FVE+E GVEG Sbjct: 335 VKVINFDPETNRISLGMKQLVPHPWENIEIKYPEGSRVTGKVVNLKPFGAFVELEPGVEG 394 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHN 362 LVH+SEM WT K K + +G+ + +VLDID+E +RISLG+KQ + NPW + + Sbjct: 395 LVHISEMSWTKKITDAHKFLKIGETINAIVLDIDKENKRISLGMKQMEPNPWLTIEDRYP 454 Query: 363 KGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQV 422 G + KIKS+T FG F+ ++ GIDGL+H+SDISW YKK E+ AVVL + Sbjct: 455 IGTILTRKIKSLTAFGAFVEIEEGIDGLIHISDISWTKRIYHPREVYKKNQEVEAVVLSI 514 Query: 423 DAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADG---VEGYLR 479 D + R++LGVKQL DP+ V GK+ + KG V++ VEG++ Sbjct: 515 DRAQHRVALGVKQLVPDPWETLDQSLPINTEVKGKIGKLIPKGVLVDIPVNNDVVEGFVP 574 Query: 480 ASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATV 534 S + ++E + +G+E+ K +D +NR + LSV+A + + Sbjct: 575 VSHLAIPKLEHSEDAFYIGEEIPLKVIELDMENRRLILSVKAFFFSRDPKLQEEY 629 Score = 311 bits (797), Expect = 4e-83, Method: Composition-based stats. Identities = 118/469 (25%), Positives = 226/469 (48%), Gaps = 17/469 (3%) Query: 85 SREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRPVRD 143 +E + + +++ E + G + V++ +P S + + Sbjct: 96 EKEHQEMLSMYEESFSSFKKGEIIEGTVVDITDKDVRVDIGFKSEGIIPISEFAYTGIPE 155 Query: 144 TLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLT 203 ++ + +++ +++S++ N Q + + GI++ Sbjct: 156 LNS----VIKVYINEIENGEGKLLLSKKKADYMINIERIKQAFADK---SSLSGIIRRRV 208 Query: 204 DYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLG 263 G VD+ G++ L + M+ K + + + +G E+ KV+ D E + L +Q+ Sbjct: 209 KGGMIVDVLGIEAFLPGSQMSLKPIPNLDQF--IGKELYFKVVNIDEEHHNIILSRRQVL 266 Query: 264 E----DPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPS 319 E + ++ +L G V N+T YG F+++ G++GL+H+++M W N HPS Sbjct: 267 EEEAEQKRQELLRKIQIDAELDGEVKNITQYGAFIDLG-GIDGLLHLTDMSWGKLN-HPS 324 Query: 320 KVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGI 379 +++ +GD V+V V++ D E RISLG+KQ +PW+ + +G RV GK+ ++ FG Sbjct: 325 EMLQIGDKVKVKVINFDPETNRISLGMKQLVPHPWENIEIKYPEGSRVTGKVVNLKPFGA 384 Query: 380 FIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAED 439 F+ L+ G++GLVH+S++SW +A + K G+ I A+VL +D E +RISLG+KQ+ + Sbjct: 385 FVELEPGVEGLVHISEMSWTKKITDAHKFLKIGETINAIVLDIDKENKRISLGMKQMEPN 444 Query: 440 PFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASR-DRVEDATLVLSVG 498 P+ G I+T K+ ++ A GA VE+ +G++G + S+ S R+ V Sbjct: 445 PWLTIEDRYPIGTILTRKIKSLTAFGAFVEIEEGIDGLIHISDISWTKRIYHPREVYKKN 504 Query: 499 DEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAM 547 EVEA +DR ++L V+ + ++ + + Sbjct: 505 QEVEAVVLSIDRAQHRVALGVKQLVPDPWETLDQSLPINTEVKGKIGKL 553 Score = 154 bits (389), Expect = 9e-36, Method: Composition-based stats. Identities = 52/280 (18%), Positives = 116/280 (41%), Gaps = 17/280 (6%) Query: 274 YPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVL 333 + +G + G V ++TD V+I EG++ +SE +T + + V++V + Sbjct: 113 FKKGEIIEGTVVDITDKDVRVDIGFKSEGIIPISEFAYTG-------IPELNSVIKVYIN 165 Query: 334 DIDEERRRISLGLKQCK-ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVH 392 +I+ ++ L K+ ++ + + G I+ G+ + + GI+ + Sbjct: 166 EIENGEGKLLLSKKKADYMINIERIKQAFADKSSLSGIIRRRVKGGMIVDVL-GIEAFLP 224 Query: 393 LSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALN---- 448 S +S + ++ G E+ V+ +D E I L +Q+ E+ Sbjct: 225 GSQMSLKPIPN--LDQF-IGKELYFKVVNIDEEHHNIILSRRQVLEEEAEQKRQELLRKI 281 Query: 449 KKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGV 508 + A + G+V + GA ++L G++G L ++ S ++ + +L +GD+V+ K Sbjct: 282 QIDAELDGEVKNITQYGAFIDLG-GIDGLLHLTDMSWGKLNHPSEMLQIGDKVKVKVINF 340 Query: 509 DRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMA 548 D + ISL ++ ++ + + Sbjct: 341 DPETNRISLGMKQLVPHPWENIEIKYPEGSRVTGKVVNLK 380 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 28/178 (15%), Positives = 69/178 (38%), Gaps = 11/178 (6%) Query: 20 PGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA----QGELEIQVGDEVDVALDAV 75 G+I+ + ++ V+ + I + EV+ + ++ Sbjct: 455 IGTILTRKIKSLTAFGAFVEIEEGIDGLIHISDISWTKRIYHPREVYKKNQEVEAVVLSI 514 Query: 76 EDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL----NGIRAFL 131 + L ++ W TL+++ V G I + G V++ + + F+ Sbjct: 515 DRAQHRVALGVKQLVPDP-WETLDQSLPINTEVKGKIGKLIPKGVLVDIPVNNDVVEGFV 573 Query: 132 PGSLVDVRPVR--DTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLE 187 P S + + + + G+E+ KVI+LD + +++S +A S + +++ + Sbjct: 574 PVSHLAIPKLEHSEDAFYIGEEIPLKVIELDMENRRLILSVKAFFFSRDPKLQEEYIA 631 >UniRef50_Q9Z8M3 30S ribosomal protein S1 n=18 Tax=Chlamydiae/Verrucomicrobia group RepID=RS1_CHLPN Length = 580 Score = 469 bits (1206), Expect = e-130, Method: Composition-based stats. Identities = 232/562 (41%), Positives = 346/562 (61%), Gaps = 16/562 (2%) Query: 4 SFAQLF--------EESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN 55 F L E + E +PG+I++G VV I+KD V+VD GLKSE IP +F + Sbjct: 27 EFKDLLYTAHRITSSEEESDNEIQPGAILKGTVVDINKDFVVVDVGLKSEGVIPMSEFID 86 Query: 56 AQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGK 115 + L + G EV+V LD ED G+ +LSREKA R W + E+ V G I K Sbjct: 87 SSEGLVL--GAEVEVYLDQAEDEEGKVVLSREKATRQRQWEYILAHCEEGSIVKGQITRK 144 Query: 116 VKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIE 175 VKGG V++ G+ AFLPGS +D + +++ GK EFK++K++ +R N+VVSRR ++E Sbjct: 145 VKGGLIVDI-GMEAFLPGSQIDNKKIKNLDDYVGKVCEFKILKINVERRNIVVSRRELLE 203 Query: 176 SENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIV 235 +E +++ +L+E + G KG+VKN+TD+G F+DL G+DGLLHITDM WKR++HPSE+V Sbjct: 204 AERISKKAELIEQISIGEYRKGVVKNITDFGVFLDLDGIDGLLHITDMTWKRIRHPSEMV 263 Query: 236 NVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVE 295 + E+ V +L D+E+ RV+LGLKQ +PW I K+YP G ++ G++ L YG F+E Sbjct: 264 ELNQELEVIILSVDKEKGRVALGLKQKEHNPWEDIEKKYPPGKRVLGKIVKLLPYGAFIE 323 Query: 296 IEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQ 355 IEEG+EGL+H+SEM W + PS+VVN GD VE +VL I ++ +ISLGLKQ + NPW Sbjct: 324 IEEGIEGLIHISEMSWVKNIVDPSEVVNKGDEVEAIVLSIQKDEGKISLGLKQTERNPWD 383 Query: 356 QFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEI 415 E + G V +IK++T++G F+ L+ GI+GL+H+SD+SW +KKG+ + Sbjct: 384 NIEEKYPIGLHVNAEIKNLTNYGAFVELEPGIEGLIHISDMSWIKKVSHPSELFKKGNSV 443 Query: 416 AAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVE 475 AV+L VD E ++I+LGVKQL+ +P+N A+ G +++G VT + A GA VEL +G+E Sbjct: 444 EAVILSVDKESKKITLGVKQLSSNPWNEIEAMFPAGTVISGVVTKITAFGAFVELQNGIE 503 Query: 476 GYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVN 535 G + SE S ++S+G+ V AK +D ++ +SLSV+ + D Sbjct: 504 GLIHVSELSDKPFAKIEDIISIGENVSAKVIKLDPDHKKVSLSVKEYLADNAYD-----Q 558 Query: 536 KQEDANFSNNAMAEAFKAAKGE 557 ++ + KG+ Sbjct: 559 DSRTELDFKDSQGPKERKKKGK 580 Score = 42.3 bits (98), Expect = 0.054, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 42/125 (33%), Gaps = 6/125 (4%) Query: 419 VLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYL 478 L D + L + GAI+ G V ++ V++ EG + Sbjct: 20 CLTEDVAEFKDLLYTAHRITSSEEESDNEIQPGAILKGTVVDINKDFVVVDVGLKSEGVI 79 Query: 479 RASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSV-RAKDEADEKDAIATVNKQ 537 SE D++ L +G EVE + + + LS +A + + +A + Sbjct: 80 PMSEF-----IDSSEGLVLGAEVEVYLDQAEDEEGKVVLSREKATRQRQWEYILAHCEEG 134 Query: 538 EDANF 542 Sbjct: 135 SIVKG 139 >UniRef50_A4SGB6 SSU ribosomal protein S1P n=12 Tax=Chlorobiaceae RepID=A4SGB6_PROVI Length = 602 Score = 460 bits (1185), Expect = e-128, Method: Composition-based stats. Identities = 212/558 (37%), Positives = 340/558 (60%), Gaps = 10/558 (1%) Query: 5 FAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQV 64 QL+ +L + IV+G +V+I V +D G KSE + +F++ E EIQV Sbjct: 46 MEQLYTSTLN--QINQDEIVKGRIVSISNKDVTIDVGYKSEGIVSLLEFRD---EDEIQV 100 Query: 65 GDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL 124 GD+V+V L+ +ED G+ +LS++KA W + + E+ ++G I +VKGG TV L Sbjct: 101 GDDVEVYLENIEDKMGQLILSKKKADVLRIWDKIYDSIENDTIISGKIINRVKGGMTVSL 160 Query: 125 NGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQ 184 +G+ AFLPGS +DV+PVRD L G+ ++F+V+K++ N+VVS + ++E E +A R++ Sbjct: 161 SGVEAFLPGSQIDVKPVRDFDALVGQTMDFRVVKINPVTQNIVVSHKVILEEEYAARREE 220 Query: 185 LLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 +L++++ GM ++G VKN+TD+G FVDLGG+DGL+HITD+ W R+ HPSE+V++ I V Sbjct: 221 MLDSIKVGMVLEGTVKNITDFGIFVDLGGLDGLVHITDITWGRINHPSEVVDLDQPIKVV 280 Query: 245 VLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLV 304 V+ FD RVSLG+KQL PW I +YP G+K GRV ++TDYG FVEIE+G+EGLV Sbjct: 281 VVGFDENTKRVSLGMKQLEAHPWENIELKYPVGSKAQGRVVSITDYGAFVEIEKGIEGLV 340 Query: 305 HVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKG 364 H+SEM WT HP + V +G VE ++L+ID++ ++SL +K+ +PW +E + + Sbjct: 341 HISEMSWTQHIKHPGQFVTLGQEVECVILNIDKDHTKLSLSMKRVNEDPWIALSEKYVEN 400 Query: 365 DRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDA 424 R +G + +ITDFG+F+ L+ G+DGLVH+SD+SW KK E+ VL+ D Sbjct: 401 TRHKGTVSNITDFGVFVELEPGVDGLVHISDLSWTKKIRHPSELVKKNQELEVKVLKFDV 460 Query: 425 ERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEAS 484 RI+LG KQ+ DP+ + GA + +++ + KG V L V+G++ A+ Sbjct: 461 HARRIALGHKQMNPDPWGGFEQQYAVGAESSAEISQIIEKGVIVILPGDVDGFVPATHLL 520 Query: 485 RDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATV-----NKQED 539 + V+D +GD + + D++N+ I LS + K+ I + N++++ Sbjct: 521 QGGVKDIHSSFKIGDALPLRVIEFDKENKRIILSALEYFKDKSKEEIESYLQAHPNEKKE 580 Query: 540 ANFSNNAMAEAFKAAKGE 557 + + K+++ + Sbjct: 581 IEDATAELEPQPKSSEKK 598 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 90/396 (22%), Positives = 175/396 (44%), Gaps = 19/396 (4%) Query: 161 QKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLH 219 +K+ S+ L + + VKG + ++++ +D+G +G++ Sbjct: 29 RKKIKFFAHYEPAELSQMEQLYTSTLNQINQDEIVKGRIVSISNKDVTIDVGYKSEGIVS 88 Query: 220 ITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGE-DPWVAIAKRYPEGT 278 + + + + VGD++ V + + + ++ L K+ W I T Sbjct: 89 LLEFRD------EDEIQVGDDVEVYLENIEDKMGQLILSKKKADVLRIWDKIYDSIENDT 142 Query: 279 KLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEE 338 ++G++ N G V + GVE + S++ +V G ++ V+ I+ Sbjct: 143 IISGKIINRVKGGMTVSLS-GVEAFLPGSQI-DVKPVRDFDALV--GQTMDFRVVKINPV 198 Query: 339 RRRISLG----LKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLS 394 + I + L++ A ++ ++ G +EG +K+ITDFGIF+ L GG+DGLVH++ Sbjct: 199 TQNIVVSHKVILEEEYAARREEMLDSIKVGMVLEGTVKNITDFGIFVDL-GGLDGLVHIT 257 Query: 395 DISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIV 454 DI+W I VV+ D +R+SLG+KQL P+ N G+ Sbjct: 258 DITWGRIN-HPSEVVDLDQPIKVVVVGFDENTKRVSLGMKQLEAHPWENIELKYPVGSKA 316 Query: 455 TGKVTAVDAKGATVELADGVEGYLRASEASR-DRVEDATLVLSVGDEVEAKFTGVDRKNR 513 G+V ++ GA VE+ G+EG + SE S ++ +++G EVE +D+ + Sbjct: 317 QGRVVSITDYGAFVEIEKGIEGLVHISEMSWTQHIKHPGQFVTLGQEVECVILNIDKDHT 376 Query: 514 AISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAE 549 +SLS++ +E + + + + + Sbjct: 377 KLSLSMKRVNEDPWIALSEKYVENTRHKGTVSNITD 412 >UniRef50_B2UME1 Ribosomal protein S1 n=6 Tax=Chlamydiae/Verrucomicrobia group RepID=B2UME1_AKKM8 Length = 562 Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats. Identities = 232/534 (43%), Positives = 339/534 (63%), Gaps = 7/534 (1%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE 61 T A+L + K E R GSIV G + I VVLVD G KSE AI +F++ + E Sbjct: 3 TTELAELIDS--KFRELREGSIVTGTIQEIRPQVVLVDIGYKSEGAISISEFEDEEIE-- 58 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 VGD+++V L+ +E+ G +LS+EKA + W + Y D V G + VKGG Sbjct: 59 --VGDQIEVLLERLENDEGIVVLSKEKAAHKQNWDKIVGVYRDGGLVKGKVKSVVKGGLM 116 Query: 122 VELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 V + G+ AFLPGS VD+ P RD GK EFK++K++ R N+V+SRR VIE+E + + Sbjct: 117 VNV-GVEAFLPGSQVDIIPPRDLNEYVGKVYEFKIVKVNDDRKNIVLSRREVIEAERADQ 175 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEI 241 R + LE ++EG +V+GIVKN+TD+GAFVDL G+DGLLHITDM+W RV HPSE++++G + Sbjct: 176 RQRFLETVKEGDKVEGIVKNITDFGAFVDLRGMDGLLHITDMSWGRVNHPSEMLHIGQSL 235 Query: 242 TVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVE 301 V +L+ DRE+ RVSLGLKQ+ ++PW I ++YP + + GRVT L YG FVE+E+GVE Sbjct: 236 EVVILEVDREKERVSLGLKQMTDNPWADIERKYPINSHVKGRVTKLLPYGAFVELEKGVE 295 Query: 302 GLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETH 361 GLVHVSE+ W + PS V+ + +E +VL I + ++ISLG++Q + NPW Sbjct: 296 GLVHVSELSWVKRITRPSDVLKLDQEIEAVVLSISVKEQKISLGVRQLEDNPWADIESRF 355 Query: 362 NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQ 421 G ++G+++++T +G F+GL+ GIDG++H+SD+SW KKGDE+ A+VL+ Sbjct: 356 PIGTVIKGQVRNLTPYGAFVGLEEGIDGMIHVSDMSWTRKINHPSEVLKKGDEVEAIVLE 415 Query: 422 VDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRAS 481 + E +R+SLG+KQL DP+ + K G +VTG+V + + GA V L ++G + S Sbjct: 416 IKKEDQRVSLGIKQLESDPWESINDRFKVGDMVTGQVAKIASFGAFVNLDGDIDGLIHIS 475 Query: 482 EASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVN 535 + S D VE V+ VGDE+ A+ VD R I LS++A + E+ T + Sbjct: 476 QLSEDHVERVKDVIKVGDEITARVIKVDSIERRIGLSIKAVNYDTEQLRRETAS 529 Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats. Identities = 120/453 (26%), Positives = 227/453 (50%), Gaps = 19/453 (4%) Query: 102 YEDAETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLD 160 + VTG I V++ + S + + G ++E + +L+ Sbjct: 17 LREGSIVTGTIQEIRPQVVLVDIGYKSEGAISISEFEDEEIE-----VGDQIEVLLERLE 71 Query: 161 QKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHI 220 VV+S+ + D+++ ++G VKG VK++ G V++ GV+ L Sbjct: 72 NDEGIVVLSKEKA---AHKQNWDKIVGVYRDGGLVKGKVKSVVKGGLMVNV-GVEAFLPG 127 Query: 221 TDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGE----DPWVAIAKRYPE 276 + + + +E VG K++K + +R + L +++ E D + E Sbjct: 128 SQVDIIPPRDLNEY--VGKVYEFKIVKVNDDRKNIVLSRREVIEAERADQRQRFLETVKE 185 Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDID 336 G K+ G V N+TD+G FV++ G++GL+H+++M W + HPS+++++G +EV++L++D Sbjct: 186 GDKVEGIVKNITDFGAFVDL-RGMDGLLHITDMSWG-RVNHPSEMLHIGQSLEVVILEVD 243 Query: 337 EERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDI 396 E+ R+SLGLKQ NPW + V+G++ + +G F+ L+ G++GLVH+S++ Sbjct: 244 REKERVSLGLKQMTDNPWADIERKYPINSHVKGRVTKLLPYGAFVELEKGVEGLVHVSEL 303 Query: 397 SWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTG 456 SW K EI AVVL + + ++ISLGV+QL ++P+ + + G ++ G Sbjct: 304 SWVKRITRPSDVLKLDQEIEAVVLSISVKEQKISLGVRQLEDNPWADIESRFPIGTVIKG 363 Query: 457 KVTAVDAKGATVELADGVEGYLRASEASRDR-VEDATLVLSVGDEVEAKFTGVDRKNRAI 515 +V + GA V L +G++G + S+ S R + + VL GDEVEA + ++++ + Sbjct: 364 QVRNLTPYGAFVGLEEGIDGMIHVSDMSWTRKINHPSEVLKKGDEVEAIVLEIKKEDQRV 423 Query: 516 SLSVRAKDEADEKDAIATVNKQEDANFSNNAMA 548 SL ++ + + + +A Sbjct: 424 SLGIKQLESDPWESINDRFKVGDMVTGQVAKIA 456 Score = 69.6 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 42/197 (21%), Positives = 78/197 (39%), Gaps = 17/197 (8%) Query: 358 AETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAA 417 +G V G I+ I + + + +G + +S+ E + GD+I Sbjct: 14 FRELREGSIVTGTIQEIRPQVVLVDIGYKSEGAISISEFED--------EEIEVGDQIEV 65 Query: 418 VVLQVDAERERISLG-VKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEG 476 ++ +++ + + L K + ++ V + + G +V GKV +V G V + GVE Sbjct: 66 LLERLENDEGIVVLSKEKAAHKQNWDKIVGVYRDGGLVKGKVKSVVKGGLMVNV--GVEA 123 Query: 477 YLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKD----AIA 532 +L S+ D VG E K V+ + I LS R EA+ D + Sbjct: 124 FLPGSQVDIIPPRDLNEY--VGKVYEFKIVKVNDDRKNIVLSRREVIEAERADQRQRFLE 181 Query: 533 TVNKQEDANFSNNAMAE 549 TV + + + + Sbjct: 182 TVKEGDKVEGIVKNITD 198 >UniRef50_Q1RJH1 30S ribosomal protein S1 n=16 Tax=Alphaproteobacteria RepID=RS1_RICBR Length = 572 Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats. Identities = 232/555 (41%), Positives = 353/555 (63%), Gaps = 3/555 (0%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE 61 + F+++ E ++ +PG++V+G V +VV+VD GLK+E IP +F + Sbjct: 21 EDDFSKMLE-TVDTSHIKPGTVVKGQ-VVDINEVVVVDVGLKNEGRIPKSEFLLSPAHKL 78 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 ++GD VDV ++ E G+ LSREKA + E W LE E V G I G+VKGGFT Sbjct: 79 PEIGDLVDVYIEKTEGHSGK-TLSREKAIKEELWGQLELICSKGEFVDGTIFGRVKGGFT 137 Query: 122 VELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 V+L+G+ AFLPGS VDVRP++D + FK++ +D+K N+VVSRRA++E S Sbjct: 138 VDLSGVVAFLPGSQVDVRPIKDPSSIMNIRQPFKILSMDKKLGNIVVSRRAILEESRSEA 197 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEI 241 RD++L ++EGM ++G VKN+TDYGAF+DLG VDGLLH+TD++W RV HPSE++ ++ Sbjct: 198 RDEMLSKIKEGMILEGTVKNITDYGAFIDLGSVDGLLHLTDISWARVNHPSEVLEFNQKV 257 Query: 242 TVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVE 301 V V+KF+ E R+SLG+KQL +PW I + +P G K+TG+VTN DYG F+E+++G+E Sbjct: 258 KVMVIKFNEETKRISLGMKQLDYNPWEKIKEEFPVGKKMTGKVTNFADYGVFIELKDGLE 317 Query: 302 GLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETH 361 GLVH SE+ W N +P K + +G VE MVL++D E+ R+SL +KQC+ NP +FAET+ Sbjct: 318 GLVHSSEISWLKSNQNPRKTLTIGQEVEFMVLEVDTEKHRVSLSIKQCQQNPLIKFAETN 377 Query: 362 NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQ 421 G ++ I++ITDFGIF+ L +DG++H DI+W G E ++ YKKGDE+ VL Sbjct: 378 PVGTVIKAPIRNITDFGIFVALSDNLDGMIHEGDITWEDNGNELLKTYKKGDEVECKVLT 437 Query: 422 VDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRAS 481 ++ E+E+ISLG+KQL +P+ KKG +V VTA+ G V + D G+++ S Sbjct: 438 INIEKEQISLGIKQLTPNPYQGIADEYKKGTVVKAVVTAIKDDGLEVLVNDKAAGFIKKS 497 Query: 482 EASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDAN 541 + S ++ E + +V E+EAK +++ I LS++A A+ + A+ ++ Sbjct: 498 DLSDEKEEQKPEMFAVDQEIEAKVASIEKSTNKILLSIKAYKIAERQKALKEYGSSDNTT 557 Query: 542 FSNNAMAEAFKAAKG 556 + +A A + +K Sbjct: 558 NMGDILANALEDSKK 572 >UniRef50_B2S2M7 Ribosomal protein S1 n=5 Tax=Bacteria RepID=B2S2M7_TREPS Length = 863 Score = 451 bits (1160), Expect = e-125, Method: Composition-based stats. Identities = 190/561 (33%), Positives = 288/561 (51%), Gaps = 19/561 (3%) Query: 9 FEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEV 68 +E PGS+ G VV ++ V VD G KSE +P E+F E + GD V Sbjct: 310 LQERYSFEAPEPGSVRMGTVVQVNAGTVFVDIGGKSEGRVPVEEF-----EAPPKAGDGV 364 Query: 69 DVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKV--KGGFTVELN- 125 V ++ V E LS+ KA R + L A D V G I K GF V+L Sbjct: 365 RVYVERVTPYGPE--LSKTKADRLGLKVKLRDAERDGTPVEGRIVRLTEKKSGFEVDLGA 422 Query: 126 GIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKL-----DQKRNNVVVSRRAVIESENSA 180 G+ AFLP S D + V L G +F + ++ + +N+V++RR +E Sbjct: 423 GMMAFLPISQSDCQKVDAPESLIGLTSKFYIERISQSKQHRGNDNIVINRRRYLEERARQ 482 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 R++ ++ V G+VK+ T +GAF+DLGG DGLLH+ DM+W V P E V G Sbjct: 483 AREEFFNSVHIEDSVSGVVKSFTSFGAFIDLGGFDGLLHVNDMSWGHVARPREFVKKGQT 542 Query: 241 ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV 300 I +KV++ D+ R++L LK DPW+ ++ + GRVT + D+G F+E+ EG+ Sbjct: 543 IELKVIRLDQAEKRINLSLKHFQPDPWLEFENKFGVNDVVKGRVTKIADFGAFIELAEGI 602 Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAET 360 EGL H+SE W K PS +V +GD VE M+L D + R+SLGLKQ ANPW++ Sbjct: 603 EGLAHISEFSWVKKTSKPSDMVKIGDEVECMILGYDIQAGRVSLGLKQVTANPWEEIEAR 662 Query: 361 HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL 420 + G R +I +T+ G FI ++ GIDG +H+ D+SW A E + G EI +V+ Sbjct: 663 YPVGARFTRRIVKVTNAGAFIEMEEGIDGFLHVDDLSWVKRTRPADHELEVGKEIECMVI 722 Query: 421 QVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRA 480 + D + RI LGVKQL+++P+ + G+ V G+V++V G V + GVEG +R Sbjct: 723 ECDPQARRIRLGVKQLSDNPWQVFANAYGVGSTVEGEVSSVTDFGIFVRVPGGVEGLVRK 782 Query: 481 SEASRDRVEDATLVLS---VGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQ 537 +R D L VGD V+A ++ K+R ++ SVR ++D ++ Sbjct: 783 QHLVENRDGDPGEALRKYAVGDRVKAVIVDMNVKDRKVAFSVRDYQRKVQRDELSRYMSA 842 Query: 538 EDANFSNN-AMAEAFKAAKGE 557 + + + + G+ Sbjct: 843 PRGEDEGSFTLGDLMRQTSGK 863 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 90/374 (24%), Positives = 156/374 (41%), Gaps = 27/374 (7%) Query: 177 ENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSEIV 235 + E + G G V + FVD+GG +G + + + Sbjct: 307 PRQLQERYSFEAPEPGSVRMGTVVQVNAGTVFVDIGGKSEGRVPVEEF--------EAPP 358 Query: 236 NVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDY--GCF 293 GD + V V + +S K V + +GT + GR+ LT+ G Sbjct: 359 KAGDGVRVYVERVTPYGPELS-KTKADRLGLKVKLRDAERDGTPVEGRIVRLTEKKSGFE 417 Query: 294 VEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRR-----ISLGLKQ 348 V++ G+ + +S+ K P + +G + + I + ++ I + ++ Sbjct: 418 VDLGAGMMAFLPISQ-SDCQKVDAPESL--IGLTSKFYIERISQSKQHRGNDNIVINRRR 474 Query: 349 CKAN----PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEE 404 ++F + + D V G +KS T FG FI L GG DGL+H++D+SW Sbjct: 475 YLEERARQAREEFFNSVHIEDSVSGVVKSFTSFGAFIDL-GGFDGLLHVNDMSWGHVA-R 532 Query: 405 AVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAK 464 KKG I V+++D +RI+L +K DP+ + +V G+VT + Sbjct: 533 PREFVKKGQTIELKVIRLDQAEKRINLSLKHFQPDPWLEFENKFGVNDVVKGRVTKIADF 592 Query: 465 GATVELADGVEGYLRASEASR-DRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKD 523 GA +ELA+G+EG SE S + + ++ +GDEVE G D + +SL ++ Sbjct: 593 GAFIELAEGIEGLAHISEFSWVKKTSKPSDMVKIGDEVECMILGYDIQAGRVSLGLKQVT 652 Query: 524 EADEKDAIATVNKQ 537 ++ A Sbjct: 653 ANPWEEIEARYPVG 666 >UniRef50_C6XS49 RNA binding S1 domain protein n=62 Tax=Bacteroidetes RepID=C6XS49_PEDHD Length = 644 Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats. Identities = 191/516 (37%), Positives = 325/516 (62%), Gaps = 9/516 (1%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEI 62 + F ++ ++ + G I+ G VV+I+ V+++ G KS+ + +F++ ++ Sbjct: 72 KKFEDMYTDTFN--QITQGEIISGTVVSINNKDVVLNVGFKSDGLVSTSEFRDTP---DL 126 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 +VGD+VDV ++A ED G+ +LSR++AK +W ++ +A ++ + G + + KGG V Sbjct: 127 KVGDKVDVFVEAPEDANGQLILSRKRAKTQRSWESINEALDNDRIINGFVKSRTKGGLIV 186 Query: 123 ELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 ++ G+ AFLPGS +D++P+RD GK +EFKV+K++ + NVVVS + +IE + +++ Sbjct: 187 DIMGVEAFLPGSQIDIKPIRDYDVYVGKTMEFKVVKINHEFKNVVVSHKILIEDDLESQK 246 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 +++ L++G ++G VKN+TD+G F+DLGGVDGLLHITD++W R++HP E++++ ++I Sbjct: 247 VEIVSKLEKGQVLEGTVKNITDFGVFIDLGGVDGLLHITDISWGRIEHPKEVLSLDEKIN 306 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 V VL FD E+ R++LGLKQL PW ++ G+K+ G++ + DYG F+EI GVEG Sbjct: 307 VVVLDFDDEKKRIALGLKQLTPHPWESLNADLAIGSKVKGKIVTVADYGAFLEIIPGVEG 366 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHN 362 L+HVSEM W+ P + + VGD +E VL +D E R++SLG+KQ +PWQ AE + Sbjct: 367 LIHVSEMSWSQNLRSPQEFLKVGDEIEAEVLTLDREDRKMSLGIKQLTQDPWQNVAERYP 426 Query: 363 KGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQV 422 G + +K++T+FG+F+ ++ GIDGL+H+SD+SW+ K GD +A VVL++ Sbjct: 427 IGSKHTAVVKNMTNFGVFVEIEEGIDGLIHISDLSWSKKVNHPNEFTKVGDTLAVVVLEL 486 Query: 423 DAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASE 482 D + ++SLG KQL E+P++ + + +I G V V KGA + L GVEG++ Sbjct: 487 DVDNRKLSLGHKQLEENPWDTFETIFTLDSIHQGTVVKVTDKGAVIALPYGVEGFVPTKH 546 Query: 483 ASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLS 518 +++ V+ + + K ++ + I +S Sbjct: 547 MAKE----DGSVIKAEETNDFKIIEFNKDAKRIVVS 578 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 102/386 (26%), Positives = 172/386 (44%), Gaps = 21/386 (5%) Query: 172 AVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKH 230 + + +G + G V ++ + +++G DGL+ ++ Sbjct: 68 DADRKKFEDMYTDTFNQITQGEIISGTVVSINNKDVVLNVGFKSDGLVSTSEFRDTPD-- 125 Query: 231 PSEIVNVGDEITVKVLKFDRERTRVSLGLKQL-GEDPWVAIAKRYPEGTKLTGRVTNLTD 289 + VGD++ V V + ++ L K+ + W +I + + G V + T Sbjct: 126 ----LKVGDKVDVFVEAPEDANGQLILSRKRAKTQRSWESINEALDNDRIINGFVKSRTK 181 Query: 290 YGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKV-VNVGDVVEVMVLDIDEERRRISLGLKQ 348 G V+I GVE + S++D V VG +E V+ I+ E + + + K Sbjct: 182 GGLIVDIM-GVEAFLPGSQID----IKPIRDYDVYVGKTMEFKVVKINHEFKNVVVSHKI 236 Query: 349 CKANPWQQFA----ETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEE 404 + + KG +EG +K+ITDFG+FI L GG+DGL+H++DISW E Sbjct: 237 LIEDDLESQKVEIVSKLEKGQVLEGTVKNITDFGVFIDL-GGVDGLLHITDISWGRI-EH 294 Query: 405 AVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAK 464 ++I VVL D E++RI+LG+KQL P+ + A G+ V GK+ V Sbjct: 295 PKEVLSLDEKINVVVLDFDDEKKRIALGLKQLTPHPWESLNADLAIGSKVKGKIVTVADY 354 Query: 465 GATVELADGVEGYLRASEASRDRV-EDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKD 523 GA +E+ GVEG + SE S + L VGDE+EA+ +DR++R +SL ++ Sbjct: 355 GAFLEIIPGVEGLIHVSEMSWSQNLRSPQEFLKVGDEIEAEVLTLDREDRKMSLGIKQLT 414 Query: 524 EADEKDAIATVNKQEDANFSNNAMAE 549 + ++ M Sbjct: 415 QDPWQNVAERYPIGSKHTAVVKNMTN 440 Score = 85.4 bits (210), Expect = 6e-15, Method: Composition-based stats. Identities = 37/202 (18%), Positives = 76/202 (37%), Gaps = 12/202 (5%) Query: 351 ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYK 410 + + +G+ + G + SI + + + + DGLV S+ K Sbjct: 75 EDMYTDTFNQITQGEIISGTVVSINNKDVVLNVGFKSDGLVSTSEFRDTPD-------LK 127 Query: 411 KGDEIAAVVLQVDAERERISLGVKQ-LAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVE 469 GD++ V + ++ L K+ + + + I+ G V + G V+ Sbjct: 128 VGDKVDVFVEAPEDANGQLILSRKRAKTQRSWESINEALDNDRIINGFVKSRTKGGLIVD 187 Query: 470 LADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEAD-EK 528 + GVE +L S+ + D + VG +E K ++ + + + +S + E D E Sbjct: 188 IM-GVEAFLPGSQIDIKPIRDYD--VYVGKTMEFKVVKINHEFKNVVVSHKILIEDDLES 244 Query: 529 DAIATVNKQEDANFSNNAMAEA 550 + V+K E + Sbjct: 245 QKVEIVSKLEKGQVLEGTVKNI 266 >UniRef50_Q0EYT6 Ribosomal protein S1 n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EYT6_9PROT Length = 621 Score = 432 bits (1110), Expect = e-119, Method: Composition-based stats. Identities = 229/555 (41%), Positives = 335/555 (60%), Gaps = 8/555 (1%) Query: 2 TESFAQLFEESLKEI-ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL 60 +SF L+E SLKE E R G +V G+VV ++ DVV++D G K+E IP +F+ A G Sbjct: 70 EDSFRLLYEASLKEKGEIRKGEMVTGMVVGLNADVVVIDVGTKAEGTIPLAEFEQA-GLP 128 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 +G E+ + +V G LS ++ EAW +E A D TV VI +VKGG+ Sbjct: 129 VPAIGTEIKALIQSVGGSSG-VSLSVLAIRQREAWDAIEAAVADESTVDAVITSEVKGGY 187 Query: 121 TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 V L+G+ AF+P S D +L GK + V++ ++ N+VVSRR + + Sbjct: 188 RVSLSGLNAFMPRSEADTDIHVLPANLIGKACKVAVLEARRRPENIVVSRRRPLTAALEV 247 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 ER G + G VK L D+GAFVD+GGVD LLH++D++W+R+KHPSE+++VG Sbjct: 248 ERAAFFAQHAVGDRLSGEVKRLADFGAFVDIGGVDALLHVSDVSWRRIKHPSEMLSVGQS 307 Query: 241 ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV 300 ++V+++K + E +VS+ +K L DPW + Y G LTG V L D+G VE+E G+ Sbjct: 308 VSVEIVKLNAETGKVSVSMKALQSDPWDNVEAIYEPGMGLTGTVRRLLDFGAVVELEPGI 367 Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAET 360 EG++H SE+ WTN++++P+ V+ GDVV+V+VL++D RRI L LK NPWQQ+ Sbjct: 368 EGMIHRSELSWTNRDVNPAAVLAEGDVVDVVVLEVDASARRIRLSLKAVSENPWQQWMAD 427 Query: 361 HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL 420 H G V GKIK+ITDFG F+ + G+DGLVH+ ++SW +G A+ Y KG E+ AVVL Sbjct: 428 HPIGTHVSGKIKNITDFGFFVHVADGMDGLVHMENLSWEKSGAAAMEPYSKGQEVEAVVL 487 Query: 421 QVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRA 480 VD E++RI+LG+KQL+ DPF ++A K+G V G V V G VELADGV+ ++ Sbjct: 488 GVDVEKQRIALGIKQLSADPFELFLAGVKRGNSVNGTVVDVKPAGVVVELADGVQAFMPM 547 Query: 481 SEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDA 540 E RD E L VG EVEAK V+ K R ++LS+R +E++A+ ++Q Sbjct: 548 REVPRDHGE-----LKVGSEVEAKIVEVNNKRRQVTLSIRQHLIQEEREAMRNYSRQTAE 602 Query: 541 NFSNNAMAEAFKAAK 555 + +A+A + Sbjct: 603 ESAPSALALELQRKL 617 >UniRef50_B0SDL5 30S Ribosomal protein S1 n=6 Tax=Leptospira RepID=B0SDL5_LEPBA Length = 566 Score = 430 bits (1107), Expect = e-119, Method: Composition-based stats. Identities = 190/546 (34%), Positives = 309/546 (56%), Gaps = 17/546 (3%) Query: 2 TESFAQLFEESLKEIETRP-------GSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK 54 T SF +L E+ + + + G+++ G VV + D V +D G K E+ + E F Sbjct: 13 TTSFGELLEKWESQSQAQEQENSAGKGTLIEGTVVDVIGDTVFLDIGEKLEARVSREDFS 72 Query: 55 NAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVING 114 + G++V + D G +LS+++A + W T++ A ++ ++G I G Sbjct: 73 -----ETPKRGEKVSAIIKKRVD--GYCVLSKKEADQRVGWETIKDASQNGYPLSGKIVG 125 Query: 115 KVKG-GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAV 173 +VK G+ VE GI+ FLP S V VR T GKE FK+I+L++K VVSR+ + Sbjct: 126 EVKNKGYLVESEGIQLFLPASHVGVRFKESTEG--GKEFSFKIIELNEKTRTGVVSRKTL 183 Query: 174 IESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSE 233 ++ N + ++LL ++ G +V G V + ++G F+ + V GLL D+++K+ + Sbjct: 184 LDEINGEKWEELLGKVKVGDKVNGKVVKIANFGVFLSVYDVVGLLRQNDISYKKFAPFKQ 243 Query: 234 IVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCF 293 N+G E+ V VL+ D+E ++SLG+KQL EDPW K +G + G VT+LT++G F Sbjct: 244 YFNIGAEVEVIVLEVDKENNKLSLGIKQLYEDPWAWAKKELEKGMVVRGIVTSLTNFGAF 303 Query: 294 VEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP 353 VE++EG+EGL+H +E+ W K HP V+ G V+ +LDID E RR+SLGLKQ NP Sbjct: 304 VELKEGLEGLIHTTELSWAKKPPHPKDVLKKGQEVDSEILDIDFEARRLSLGLKQLLPNP 363 Query: 354 WQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGD 413 W+ + G+ +EGKI IT +G F+ ++ GI+GL+H+SDI+W+ + + KKG Sbjct: 364 WEALSANVRAGNVLEGKITGITKYGAFVEVESGIEGLIHISDITWDEKEKNPLNLLKKGQ 423 Query: 414 EIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADG 473 + +L V+ + +RIS G+KQL+E P+ G +V G+V ++ + G VE+ G Sbjct: 424 SVQYKILDVNLDAQRISCGLKQLSEHPYEALRKKYPPGTLVEGRVKSIVSFGVFVEVEPG 483 Query: 474 VEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIAT 533 EG + SE R + VGD V ++ N+ ISLS++ D+A E++ +A Sbjct: 484 YEGLVHISEIPDGRNIKLEDLYKVGDSVRTVVVKIEPNNKKISLSIKDFDKAVEREEMAK 543 Query: 534 VNKQED 539 K+++ Sbjct: 544 YMKEDN 549 Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats. Identities = 53/279 (18%), Positives = 100/279 (35%), Gaps = 24/279 (8%) Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDID 336 GT + G V ++ F++I E +E V + T G+ V ++ Sbjct: 39 GTLIEGTVVDVIGDTVFLDIGEKLEARVSREDFSETP---------KRGEKVSAIIKK-- 87 Query: 337 EERRRISLGLKQCKAN-PWQQFAETHNKGDRVEGKIKS-ITDFGIFIGLDGGIDGLVHLS 394 L K+ W+ + G + GKI + + G + GI + S Sbjct: 88 RVDGYCVLSKKEADQRVGWETIKDASQNGYPLSGKIVGEVKNKGYLVE-SEGIQLFLPAS 146 Query: 395 DISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAED----PFNNWVALNKK 450 G + G E + +++++ + + K L ++ + + K Sbjct: 147 H-----VGVRFKESTEGGKEFSFKIIELNEKTRTGVVSRKTLLDEINGEKWEELLGKVKV 201 Query: 451 GAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDR 510 G V GKV + G + + D V G LR ++ S + ++G EVE VD+ Sbjct: 202 GDKVNGKVVKIANFGVFLSVYD-VVGLLRQNDISYKKFAPFKQYFNIGAEVEVIVLEVDK 260 Query: 511 KNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAE 549 +N +SL ++ E A + K ++ Sbjct: 261 ENNKLSLGIKQLYEDPWAWAKKELEKGMVVRGIVTSLTN 299 >UniRef50_B5YH71 30S ribosomal protein S1 n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YH71_THEYD Length = 534 Score = 428 bits (1100), Expect = e-118, Method: Composition-based stats. Identities = 212/537 (39%), Positives = 320/537 (59%), Gaps = 21/537 (3%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE 61 + L+E SL G I++G ++ + D V+VD G K E IP +F + + Sbjct: 8 KQELESLYEGSLS--HIERGEIIKGKIMGVRNDGVIVDVGYKFEGIIPLNEFSEEELKN- 64 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 I+ DE++V ++ ++D G LSR++A + + W L AYE A V I GK KGG Sbjct: 65 IKEADEIEVFIEKIDDAQGIISLSRDRALKIKGWEILMDAYEKALPVEVKITGKTKGGVL 124 Query: 122 VELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRN----------NVVVSRR 171 GI F+P SL+++R ++ GK + K+ K++ +N ++++SR+ Sbjct: 125 TSFYGINGFIPASLLEIRKPKNLDEYVGKTFKVKIEKIEPPKNLYGQWRNLKTSLILSRK 184 Query: 172 AVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHP 231 A ++ E + ++ E ++EG+++KG VKN+T+YG FVDLGG+DG LHI+D++W +V+HP Sbjct: 185 AYLQEEKEKMKKEISEKIKEGLKIKGTVKNITNYGVFVDLGGLDGFLHISDISWGKVRHP 244 Query: 232 SEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYG 291 S+ +G E VLK D E R++LG KQ DPW I K+Y G K+ G+VT + D+G Sbjct: 245 SQFFEIGSEYEFIVLKADTENERITLGYKQKKADPWENIDKKYHPGMKVRGKVTRVEDFG 304 Query: 292 CFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKA 351 FVE+EEGVEGLVHVSE+DW HP+ V + + V VLDID E R+ISL KQ K Sbjct: 305 LFVELEEGVEGLVHVSELDWIAP-KHPTYYAEVDEWINVKVLDIDRENRKISLSFKQLKP 363 Query: 352 NPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKK 411 PW+ A+ + GDR+ GK+K+ITDFGIF+ L G+DGL+H+SDISW + + +KK Sbjct: 364 KPWEVVAKKYKVGDRISGKVKTITDFGIFVRLPEGVDGLIHISDISWTKHIDHPSQIFKK 423 Query: 412 GDEIAAVVLQVDAERERISLGVKQLAEDPF-NNWVALNKKGAIVTGKVTAVDAKGATVEL 470 G ++ AV+L ++ E+E++SLG+KQL+EDP+ K G I KV G V++ Sbjct: 424 GQKVDAVILSLEPEKEKLSLGIKQLSEDPWIKEIPEKFKIGEIYNAKVIKKTEHGLFVDI 483 Query: 471 ADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADE 527 VEG + SE ++R + GDE++ VD++ R I LS++ DE +E Sbjct: 484 EGIVEGLVYNSEIDKNR------TVKEGDEIKVIVVKVDKEKRKIGLSMKKIDENEE 534 Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats. Identities = 116/461 (25%), Positives = 208/461 (45%), Gaps = 26/461 (5%) Query: 92 HEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRPVRDTLHLEGK 150 + E E + G I G G V++ +P + +++ Sbjct: 12 ESLYEGSLSHIERGEIIKGKIMGVRNDGVIVDVGYKFEGIIPLNEFSEEELKNIKEA--D 69 Query: 151 ELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVD 210 E+E + K+D + + +SR ++ + E V+ + T G Sbjct: 70 EIEVFIEKIDDAQGIISLSRDRALKIKGWEILMDAYEKALP---VEVKITGKTKGGVLTS 126 Query: 211 LGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERT----------RVSLGLK 260 G++G + + + ++ K+ E VG VK+ K + + + L K Sbjct: 127 FYGINGFIPASLLEIRKPKNLDEY--VGKTFKVKIEKIEPPKNLYGQWRNLKTSLILSRK 184 Query: 261 QLGEDPWVAIAKR----YPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNI 316 ++ + K EG K+ G V N+T+YG FV++ G++G +H+S++ W K Sbjct: 185 AYLQEEKEKMKKEISEKIKEGLKIKGTVKNITNYGVFVDLG-GLDGFLHISDISWG-KVR 242 Query: 317 HPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITD 376 HPS+ +G E +VL D E RI+LG KQ KA+PW+ + ++ G +V GK+ + D Sbjct: 243 HPSQFFEIGSEYEFIVLKADTENERITLGYKQKKADPWENIDKKYHPGMKVRGKVTRVED 302 Query: 377 FGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQL 436 FG+F+ L+ G++GLVH+S++ W +A + + + I VL +D E +ISL KQL Sbjct: 303 FGLFVELEEGVEGLVHVSELDW-IAPKHPTYYAEVDEWINVKVLDIDRENRKISLSFKQL 361 Query: 437 AEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASR-DRVEDATLVL 495 P+ K G ++GKV + G V L +GV+G + S+ S ++ + + Sbjct: 362 KPKPWEVVAKKYKVGDRISGKVKTITDFGIFVRLPEGVDGLIHISDISWTKHIDHPSQIF 421 Query: 496 SVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNK 536 G +V+A ++ + +SL ++ E I K Sbjct: 422 KKGQKVDAVILSLEPEKEKLSLGIKQLSEDPWIKEIPEKFK 462 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 100/393 (25%), Positives = 178/393 (45%), Gaps = 26/393 (6%) Query: 173 VIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHP 231 + E + + L +++ G +KG + + + G VD+G +G++ + + + + +K+ Sbjct: 6 SEKQELESLYEGSLSHIERGEIIKGKIMGVRNDGVIVDVGYKFEGIIPLNEFSEEELKNI 65 Query: 232 SEIVNVGDEITVKVLKFDRERTRVSLGL-KQLGEDPWVAIAKRYPEGTKLTGRVTNLTDY 290 E DEI V + K D + +SL + L W + Y + + ++T T Sbjct: 66 KEA----DEIEVFIEKIDDAQGIISLSRDRALKIKGWEILMDAYEKALPVEVKITGKTKG 121 Query: 291 GCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERR---------- 340 G G+ G + S + K + + V G +V + I+ + Sbjct: 122 GVLTSFY-GINGFIPAS-LLEIRKPKNLDEYV--GKTFKVKIEKIEPPKNLYGQWRNLKT 177 Query: 341 RISLG----LKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDI 396 + L L++ K ++ +E +G +++G +K+IT++G+F+ L GG+DG +H+SDI Sbjct: 178 SLILSRKAYLQEEKEKMKKEISEKIKEGLKIKGTVKNITNYGVFVDL-GGLDGFLHISDI 236 Query: 397 SWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTG 456 SW + ++ G E +VL+ D E ERI+LG KQ DP+ N G V G Sbjct: 237 SWGKV-RHPSQFFEIGSEYEFIVLKADTENERITLGYKQKKADPWENIDKKYHPGMKVRG 295 Query: 457 KVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAIS 516 KVT V+ G VEL +GVEG + SE + T V + + K +DR+NR IS Sbjct: 296 KVTRVEDFGLFVELEEGVEGLVHVSELDWIAPKHPTYYAEVDEWINVKVLDIDRENRKIS 355 Query: 517 LSVRAKDEADEKDAIATVNKQEDANFSNNAMAE 549 LS + + + + + + Sbjct: 356 LSFKQLKPKPWEVVAKKYKVGDRISGKVKTITD 388 Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats. Identities = 57/308 (18%), Positives = 109/308 (35%), Gaps = 25/308 (8%) Query: 257 LGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNI 316 L KQ E + G + G++ + + G V++ EG++ ++E Sbjct: 5 LSEKQELESLYEGSLSHIERGEIIKGKIMGVRNDGVIVDVGYKFEGIIPLNEFSEEE--- 61 Query: 317 HPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKA-NPWQQFAETHNKGDRVEGKIKSIT 375 K + D +EV + ID+ + ISL + W+ + + K VE KI T Sbjct: 62 --LKNIKEADEIEVFIEKIDDAQGIISLSRDRALKIKGWEILMDAYEKALPVEVKITGKT 119 Query: 376 DFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERE-------- 427 G+ GI+G + S + + G + +++ + Sbjct: 120 KGGVLTSFY-GINGFIPAS-LLEIRKPKNLDEY--VGKTFKVKIEKIEPPKNLYGQWRNL 175 Query: 428 --RISLGVK----QLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRAS 481 + L K + E K+G + G V + G V+L G++G+L S Sbjct: 176 KTSLILSRKAYLQEEKEKMKKEISEKIKEGLKIKGTVKNITNYGVFVDLG-GLDGFLHIS 234 Query: 482 EASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDAN 541 + S +V + +G E E D +N I+L + K ++ + Sbjct: 235 DISWGKVRHPSQFFEIGSEYEFIVLKADTENERITLGYKQKKADPWENIDKKYHPGMKVR 294 Query: 542 FSNNAMAE 549 + + Sbjct: 295 GKVTRVED 302 >UniRef50_Q027A8 SSU ribosomal protein S1P n=2 Tax=Acidobacteria RepID=Q027A8_SOLUE Length = 572 Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 204/550 (37%), Positives = 307/550 (55%), Gaps = 38/550 (6%) Query: 2 TESFAQLFEESLKEIET---RPGSI-VRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ 57 ESF + + + PG + G VVAI + L+D G K+E IP F++ Sbjct: 24 NESFGDILTQYEQSHTHRITEPGKKGLEGTVVAITAEAALLDIGFKTEGIIPLTDFQSTG 83 Query: 58 GELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVK 117 ++VGD++ V++ + G LSR K +R + W LEKA+ + + G I VK Sbjct: 84 --DTVKVGDKLPVSIKGRDP-EGYYELSRLKVERPKDWSALEKAFAEKAAILGTITAVVK 140 Query: 118 GGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESE 177 GG +V++ G+RAF+P S R + L G+E+ ++IKLD ++VV RRAV+E E Sbjct: 141 GGVSVDV-GVRAFMPASRSGARDAAEMEKLVGQEIRCRIIKLDVADEDLVVDRRAVLEEE 199 Query: 178 NSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNV 237 A ++Q ++EG V G +++LTDYGAFVD+GGVD LLH+ D++W RV P++++NV Sbjct: 200 ERASKEQRYSQVKEGEIVHGTIRSLTDYGAFVDIGGVDALLHVADISWGRVNKPADVLNV 259 Query: 238 GDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE 297 GD++ K+LK D + R+SLGLKQL PW +A +Y G ++TG VT +TD+G FVE+E Sbjct: 260 GDKVEAKILKVDPAKKRISLGLKQLQPHPWDLVADKYKVGERVTGSVTRVTDFGAFVELE 319 Query: 298 EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQF 357 +G+EGLVH+SEM W+ K P+ +V GD VEV+VL ++ RRISLGLKQ +PW Sbjct: 320 KGIEGLVHLSEMSWSKKIRRPADMVKPGDQVEVVVLGVNAADRRISLGLKQALGDPWADA 379 Query: 358 AETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAA 417 A+ G +EG + SI FG F+ + G++G+VH+ DIS K G + A Sbjct: 380 AQKLAVGTVIEGPVTSIQKFGAFVQVAEGVEGMVHVGDISAEKRINHPQDVVKVGQVVKA 439 Query: 418 VVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGY 477 VL++D E+ R+ LG+KQL + ++A +K+G +VTG++T V + A VEL +GV Sbjct: 440 QVLELDVEKRRLRLGMKQLIPTSLDEYIAEHKEGDVVTGRMTDVSSGRAKVELGEGVHAT 499 Query: 478 LRASEASRDRVEDATLVLSV------------------------------GDEVEAKFTG 507 R + S + E+ V G + T Sbjct: 500 CRLAAESAPKEEEKAGPDKVDLGSLTSMLQARWKSGQGGGGAGKPEGPRSGQIRSFRITR 559 Query: 508 VDRKNRAISL 517 +D ++ I L Sbjct: 560 LDAASKKIEL 569 Score = 303 bits (777), Expect = 1e-80, Method: Composition-based stats. Identities = 120/445 (26%), Positives = 208/445 (46%), Gaps = 18/445 (4%) Query: 108 VTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNV 166 + G + +++ +P + G +L + D + Sbjct: 50 LEGTVVAITAEAALLDIGFKTEGIIP---LTDFQSTGDTVKVGDKLPVSIKGRDPEGYYE 106 Query: 167 VVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWK 226 + + E + L + E + G + + G VD+ GV + + + Sbjct: 107 LSRLKV----ERPKDWSALEKAFAEKAAILGTITAVVKGGVSVDV-GVRAFMPASRSGAR 161 Query: 227 RVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGED----PWVAIAKRYPEGTKLTG 282 ++ VG EI +++K D + + + + E+ + EG + G Sbjct: 162 DAAEMEKL--VGQEIRCRIIKLDVADEDLVVDRRAVLEEEERASKEQRYSQVKEGEIVHG 219 Query: 283 RVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRI 342 + +LTDYG FV+I GV+ L+HV+++ W + P+ V+NVGD VE +L +D ++RI Sbjct: 220 TIRSLTDYGAFVDIG-GVDALLHVADISWG-RVNKPADVLNVGDKVEAKILKVDPAKKRI 277 Query: 343 SLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAG 402 SLGLKQ + +PW A+ + G+RV G + +TDFG F+ L+ GI+GLVHLS++SW+ Sbjct: 278 SLGLKQLQPHPWDLVADKYKVGERVTGSVTRVTDFGAFVELEKGIEGLVHLSEMSWSKKI 337 Query: 403 EEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVD 462 K GD++ VVL V+A RISLG+KQ DP+ + G ++ G VT++ Sbjct: 338 RRPADMVKPGDQVEVVVLGVNAADRRISLGLKQALGDPWADAAQKLAVGTVIEGPVTSIQ 397 Query: 463 AKGATVELADGVEGYLRASEAS-RDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRA 521 GA V++A+GVEG + + S R+ V+ VG V+A+ +D + R + L ++ Sbjct: 398 KFGAFVQVAEGVEGMVHVGDISAEKRINHPQDVVKVGQVVKAQVLELDVEKRRLRLGMKQ 457 Query: 522 KDEADEKDAIATVNKQEDANFSNNA 546 + IA + + Sbjct: 458 LIPTSLDEYIAEHKEGDVVTGRMTD 482 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 99/362 (27%), Positives = 166/362 (45%), Gaps = 20/362 (5%) Query: 195 VKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERT 253 ++G V +T A +D+G +G++ +TD + + V VGD++ V + D E Sbjct: 50 LEGTVVAITAEAALLDIGFKTEGIIPLTD-----FQSTGDTVKVGDKLPVSIKGRDPE-G 103 Query: 254 RVSLG-LKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWT 312 L LK W A+ K + E + G +T + G V++ GV + S Sbjct: 104 YYELSRLKVERPKDWSALEKAFAEKAAILGTITAVVKGGVSVDV--GVRAFMPASR-SGA 160 Query: 313 NKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP----WQQFAETHNKGDRVE 368 K+V G + ++ +D + + + +Q +G+ V Sbjct: 161 RDAAEMEKLV--GQEIRCRIIKLDVADEDLVVDRRAVLEEEERASKEQRYSQVKEGEIVH 218 Query: 369 GKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERER 428 G I+S+TD+G F+ + GG+D L+H++DISW + GD++ A +L+VD ++R Sbjct: 219 GTIRSLTDYGAFVDI-GGVDALLHVADISWGRVNK-PADVLNVGDKVEAKILKVDPAKKR 276 Query: 429 ISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASR-DR 487 ISLG+KQL P++ K G VTG VT V GA VEL G+EG + SE S + Sbjct: 277 ISLGLKQLQPHPWDLVADKYKVGERVTGSVTRVTDFGAFVELEKGIEGLVHLSEMSWSKK 336 Query: 488 VEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAM 547 + ++ GD+VE GV+ +R ISL ++ DA + ++ Sbjct: 337 IRRPADMVKPGDQVEVVVLGVNAADRRISLGLKQALGDPWADAAQKLAVGTVIEGPVTSI 396 Query: 548 AE 549 + Sbjct: 397 QK 398 Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 67/309 (21%), Positives = 118/309 (38%), Gaps = 26/309 (8%) Query: 259 LKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHP 318 L Q + I + +G L G V +T ++I EG++ +++ Sbjct: 31 LTQYEQSHTHRITEPGKKG--LEGTVVAITAEAALLDIGFKTEGIIPLTDF------QST 82 Query: 319 SKVVNVGDVVEVMVLDIDEERRRISLGLKQCK-ANPWQQFAETHNKGDRVEGKIKSITDF 377 V VGD + V + D E L + + W + + + G I ++ Sbjct: 83 GDTVKVGDKLPVSIKGRDPEGY-YELSRLKVERPKDWSALEKAFAEKAAILGTITAVVKG 141 Query: 378 GIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLA 437 G+ + + G+ + S S E + G EI ++++D E + + + + Sbjct: 142 GVSVDV--GVRAFMPASR-SGARDAAEMEKL--VGQEIRCRIIKLDVADEDLVVDRRAVL 196 Query: 438 EDP----FNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATL 493 E+ + K+G IV G + ++ GA V++ GV+ L ++ S RV Sbjct: 197 EEEERASKEQRYSQVKEGEIVHGTIRSLTDYGAFVDIG-GVDALLHVADISWGRVNKPAD 255 Query: 494 VLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSN------NAM 547 VL+VGD+VEAK VD + ISL ++ E S A Sbjct: 256 VLNVGDKVEAKILKVDPAKKRISLGLKQLQPHPWDLVADKYKVGERVTGSVTRVTDFGAF 315 Query: 548 AEAFKAAKG 556 E K +G Sbjct: 316 VELEKGIEG 324 >UniRef50_Q1IY12 RNA binding S1 n=9 Tax=Deinococci RepID=Q1IY12_DEIGD Length = 587 Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats. Identities = 170/432 (39%), Positives = 265/432 (61%), Gaps = 6/432 (1%) Query: 8 LFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE-----I 62 L E+ + G IV G VV I ++ + VD G K E IP Q + LE Sbjct: 59 LASEAQEPQTVSRGDIVDGTVVFIGQEGIAVDVGAKVEGIIPLNQIGDEPVTLEQAQQMY 118 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 + GD+++ + V+ + +LS+++A + + W LE+ E E + KV+GG Sbjct: 119 KPGDQIEAYVVRVDLANNQIVLSKKRADQDKGWRVLERMQEQDEAFEVEVLEKVRGGLVA 178 Query: 123 ELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 ++ GIRAFLP S VD R V D GK L K+I+L++KRN V++S RA++E++ + R Sbjct: 179 QVEGIRAFLPASQVDTRRVNDLDPYVGKPLMVKLIELNRKRNRVIISHRAILEAQKAKAR 238 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 +Q + L G + +G V +TD+G FV+LGG+DGL+H +++ + R HP ++V VGD++ Sbjct: 239 EQTIGKLVPGAQFEGEVVEITDFGVFVNLGGIDGLVHRSELTYGRFNHPRDVVKVGDKVQ 298 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 V+V+ D R R++L +K L +DPW ++Y G ++ G+VTNLT++G FVE+E G+EG Sbjct: 299 VQVIDVDEGRERINLSMKSLTQDPWEGAVEKYHIGQRVRGKVTNLTNFGAFVELEPGLEG 358 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHN 362 LVHVSEM WT + HP++V+ GD VE ++L ID + RRISLG++Q +PW + + Sbjct: 359 LVHVSEMSWTKRVRHPNEVLKEGDEVEAVILRIDPKERRISLGIRQTTDDPWSALPDRYP 418 Query: 363 KGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQV 422 G V+GKI +TDFG+F+ ++ GI+GL+H+S++ +KKGDEI AV+L + Sbjct: 419 PGTPVKGKITGMTDFGVFMEIEEGIEGLIHISELDTQRVN-NPADLFKKGDEIEAVILNI 477 Query: 423 DAERERISLGVK 434 D +R SL + Sbjct: 478 DPVEQRASLSRR 489 Score = 335 bits (859), Expect = 3e-90, Method: Composition-based stats. Identities = 125/447 (27%), Positives = 220/447 (49%), Gaps = 16/447 (3%) Query: 85 SREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRPVRD 143 + + + + V G + + G V++ + +P + + PV Sbjct: 52 AMTMEDVLASEAQEPQTVSRGDIVDGTVVFIGQEGIAVDVGAKVEGIIPLNQIGDEPVTL 111 Query: 144 TL----HLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIV 199 + G ++E V+++D N +V+S++ + + +++ E + V Sbjct: 112 EQAQQMYKPGDQIEAYVVRVDLANNQIVLSKKRADQDKGWRVLERMQEQ---DEAFEVEV 168 Query: 200 KNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGL 259 G + G+ L + + +RV VG + VK+++ +R+R RV + Sbjct: 169 LEKVRGGLVAQVEGIRAFLPASQVDTRRVNDLDPY--VGKPLMVKLIELNRKRNRVIISH 226 Query: 260 KQLGEDPWVAIAK----RYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKN 315 + + E + + G + G V +TD+G FV + G++GLVH SE+ + N Sbjct: 227 RAILEAQKAKAREQTIGKLVPGAQFEGEVVEITDFGVFVNLG-GIDGLVHRSELTYGRFN 285 Query: 316 IHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSIT 375 HP VV VGD V+V V+D+DE R RI+L +K +PW+ E ++ G RV GK+ ++T Sbjct: 286 -HPRDVVKVGDKVQVQVIDVDEGRERINLSMKSLTQDPWEGAVEKYHIGQRVRGKVTNLT 344 Query: 376 DFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQ 435 +FG F+ L+ G++GLVH+S++SW K+GDE+ AV+L++D + RISLG++Q Sbjct: 345 NFGAFVELEPGLEGLVHVSEMSWTKRVRHPNEVLKEGDEVEAVILRIDPKERRISLGIRQ 404 Query: 436 LAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVL 495 +DP++ G V GK+T + G +E+ +G+EG + SE RV + + Sbjct: 405 TTDDPWSALPDRYPPGTPVKGKITGMTDFGVFMEIEEGIEGLIHISELDTQRVNNPADLF 464 Query: 496 SVGDEVEAKFTGVDRKNRAISLSVRAK 522 GDE+EA +D + SLS R Sbjct: 465 KKGDEIEAVILNIDPVEQRASLSRRRA 491 Score = 269 bits (687), Expect = 3e-70, Method: Composition-based stats. Identities = 106/367 (28%), Positives = 168/367 (45%), Gaps = 15/367 (4%) Query: 192 GMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRV--KHPSEIVNVGDEITVKVLKF 248 G V G V + G VD+G V+G++ + + + V + ++ GD+I V++ Sbjct: 72 GDIVDGTVVFIGQEGIAVDVGAKVEGIIPLNQIGDEPVTLEQAQQMYKPGDQIEAYVVRV 131 Query: 249 DRERTRVSLGLKQLGEDPWVAIAKRYPEGTK-LTGRVTNLTDYGCFVEIEEGVEGLVHVS 307 D ++ L K+ +D + +R E + V G ++E G+ + S Sbjct: 132 DLANNQIVLSKKRADQDKGWRVLERMQEQDEAFEVEVLEKVRGGLVAQVE-GIRAFLPAS 190 Query: 308 EMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLG----LKQCKANPWQQFAETHNK 363 ++ T + V G + V +++++ +R R+ + L+ KA +Q Sbjct: 191 QV-DTRRVNDLDPYV--GKPLMVKLIELNRKRNRVIISHRAILEAQKAKAREQTIGKLVP 247 Query: 364 GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVD 423 G + EG++ ITDFG+F+ L GGIDGLVH S++++ K GD++ V+ VD Sbjct: 248 GAQFEGEVVEITDFGVFVNL-GGIDGLVHRSELTYGRFN-HPRDVVKVGDKVQVQVIDVD 305 Query: 424 AERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEA 483 RERI+L +K L +DP+ V G V GKVT + GA VEL G+EG + SE Sbjct: 306 EGRERINLSMKSLTQDPWEGAVEKYHIGQRVRGKVTNLTNFGAFVELEPGLEGLVHVSEM 365 Query: 484 SR-DRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANF 542 S RV VL GDEVEA +D K R ISL +R + Sbjct: 366 SWTKRVRHPNEVLKEGDEVEAVILRIDPKERRISLGIRQTTDDPWSALPDRYPPGTPVKG 425 Query: 543 SNNAMAE 549 M + Sbjct: 426 KITGMTD 432 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 50/285 (17%), Positives = 111/285 (38%), Gaps = 11/285 (3%) Query: 271 AKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIH-PSKVVNVGDVVE 329 + G + G V + G V++ VEG++ ++++ + ++ GD +E Sbjct: 66 PQTVSRGDIVDGTVVFIGQEGIAVDVGAKVEGIIPLNQIGDEPVTLEQAQQMYKPGDQIE 125 Query: 330 VMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDR-VEGKIKSITDFGIFIGLDGGID 388 V+ +D +I L K+ + + E + D E ++ G+ ++ GI Sbjct: 126 AYVVRVDLANNQIVLSKKRADQDKGWRVLERMQEQDEAFEVEVLEKVRGGLVAQVE-GIR 184 Query: 389 GLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVAL- 447 + S + + G + +++++ +R R+ + + + E Sbjct: 185 AFLPASQVDTRRVNDLDP---YVGKPLMVKLIELNRKRNRVIISHRAILEAQKAKAREQT 241 Query: 448 ---NKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAK 504 GA G+V + G V L G++G + SE + R V+ VGD+V+ + Sbjct: 242 IGKLVPGAQFEGEVVEITDFGVFVNLG-GIDGLVHRSELTYGRFNHPRDVVKVGDKVQVQ 300 Query: 505 FTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAE 549 VD I+LS+++ + + A+ + + + Sbjct: 301 VIDVDEGRERINLSMKSLTQDPWEGAVEKYHIGQRVRGKVTNLTN 345 Score = 72.3 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 7/116 (6%) Query: 443 NWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRV--EDATLVLSVGDE 500 +G IV G V + +G V++ VEG + ++ + V E A + GD+ Sbjct: 64 QEPQTVSRGDIVDGTVVFIGQEGIAVDVGAKVEGIIPLNQIGDEPVTLEQAQQMYKPGDQ 123 Query: 501 VEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAAKG 556 +EA VD N I LS + D+ + + +Q++A E + +G Sbjct: 124 IEAYVVRVDLANNQIVLSKKRADQDKGWRVLERMQEQDEAFE-----VEVLEKVRG 174 Score = 60.7 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 29/73 (39%), Gaps = 3/73 (4%) Query: 20 PGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQF---KNAQGELEIQVGDEVDVALDAVE 76 PG+ V+G + + V ++ E I + + + GDE++ + ++ Sbjct: 419 PGTPVKGKITGMTDFGVFMEIEEGIEGLIHISELDTQRVNNPADLFKKGDEIEAVILNID 478 Query: 77 DGFGETLLSREKA 89 LSR +A Sbjct: 479 PVEQRASLSRRRA 491 >UniRef50_B3TCT6 Putative S1 RNA binding domain protein n=2 Tax=root RepID=B3TCT6_9BACT Length = 571 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 204/551 (37%), Positives = 340/551 (61%), Gaps = 4/551 (0%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEI 62 + F +L + + + G I GVV + K+ + VD GLKSE AIP E+FK + +I Sbjct: 14 KEFEKLLSQDWGNRKFKEGEITTGVVSKVGKNFIFVDLGLKSEGAIPVEEFKLTKEIDKI 73 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 ++G +++V L+ +E+ G ++SREKA++ +W +EKA+E+ E +TGVI K KGGF V Sbjct: 74 EIGSKIEVLLEKIENKTGNVVISREKARKAHSWKKMEKAFENQEKITGVIISKCKGGFIV 133 Query: 123 ELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 ++ FLPGS +D++P+++ HL F+ +KLD++R N+V+SRRA++E +R Sbjct: 134 DVESCLCFLPGSQIDLKPLKNFDHLMKVPQTFECVKLDKRRGNIVLSRRAILEKILVRDR 193 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 D+++ L+EG V G +KNLT++GAFVDL GVD LLHITD++W+R+ P++++++G I Sbjct: 194 DKIISKLKEGDIVSGTIKNLTEWGAFVDLNGVDALLHITDISWRRINKPADLLSIGQSIK 253 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 K++K + ++SLG+KQL EDP+ + Y G T +TN+ DYGCF ++EEG+EG Sbjct: 254 AKIIKIEEGTKKISLGVKQLTEDPYKKVIDSYEVGKNYTAIITNVQDYGCFAKLEEGLEG 313 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHN 362 L+H SE+ WT KNIHP KV++ ++V +L+ D E+RR+SL K NPW +F + H Sbjct: 314 LIHQSELSWTKKNIHPGKVLSTSQKIQVQILEKDMEKRRLSLSYKNTLVNPWVKFTKNHK 373 Query: 363 KGDRVEGKIKSITDFGIFIGL-DGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQ 421 G+ EG +K+ITD+G+FI + D +DG++H D++W+ E +YKK I +L+ Sbjct: 374 VGNEAEGVVKNITDYGLFISVKDSELDGMIHYKDLNWSEKESEL-EKYKKNQLIKFKILE 432 Query: 422 VDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADG-VEGYLRA 480 ++ E+E+I LG+KQL +DPF ++ K +VT V + G V + + ++ Sbjct: 433 INQEKEKIRLGIKQLTQDPFKFFMNK-KISDVVTAIVVSSSNDGIHVYAGNKDLLLLIKR 491 Query: 481 SEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDA 540 S+ +++ + GD V+ +D++NR + LS++ +E ++K I ++ Sbjct: 492 SQLAKEPENQRPSRWARGDRVDCMIIELDKENRKVVLSIKVLEEQEQKITIKKFGSKDSG 551 Query: 541 NFSNNAMAEAF 551 ++ + Sbjct: 552 GTLSDILGPLL 562 Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats. Identities = 87/395 (22%), Positives = 163/395 (41%), Gaps = 16/395 (4%) Query: 162 KRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHI 220 + ++ E E +D +EG G+V + FVDLG +G + + Sbjct: 2 EETIKQYKSKSHKEFEKLLSQDWGNRKFKEGEITTGVVSKVGKNFIFVDLGLKSEGAIPV 61 Query: 221 TDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGL-KQLGEDPWVAIAKRYPEGTK 279 + ++ + + +G +I V + K + + V + K W + K + K Sbjct: 62 EEF---KLTKEIDKIEIGSKIEVLLEKIENKTGNVVISREKARKAHSWKKMEKAFENQEK 118 Query: 280 LTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEER 339 +TG + + G V++E + S++ + ++ V E + +D+ R Sbjct: 119 ITGVIISKCKGGFIVDVE-SCLCFLPGSQI-DLKPLKNFDHLMKVPQTFEC--VKLDKRR 174 Query: 340 RRISLGLKQCKAN----PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSD 395 I L + + +GD V G IK++T++G F+ L G+D L+H++D Sbjct: 175 GNIVLSRRAILEKILVRDRDKIISKLKEGDIVSGTIKNLTEWGAFVDL-NGVDALLHITD 233 Query: 396 ISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVT 455 ISW + G I A +++++ ++ISLGVKQL EDP+ + + G T Sbjct: 234 ISWRRINK-PADLLSIGQSIKAKIIKIEEGTKKISLGVKQLTEDPYKKVIDSYEVGKNYT 292 Query: 456 GKVTAVDAKGATVELADGVEGYLRASEASRDRVE-DATLVLSVGDEVEAKFTGVDRKNRA 514 +T V G +L +G+EG + SE S + VLS +++ + D + R Sbjct: 293 AIITNVQDYGCFAKLEEGLEGLIHQSELSWTKKNIHPGKVLSTSQKIQVQILEKDMEKRR 352 Query: 515 ISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAE 549 +SLS + +A + + Sbjct: 353 LSLSYKNTLVNPWVKFTKNHKVGNEAEGVVKNITD 387 >UniRef50_D0J9D1 30S ribosomal protein S1 n=25 Tax=Bacteria RepID=D0J9D1_BLASP Length = 606 Score = 402 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 177/544 (32%), Positives = 302/544 (55%), Gaps = 9/544 (1%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEI 62 + F +++ E+L + + I +G + I + ++VD G K+E AIP +F + Sbjct: 49 KKFEKIYAETLP--KIQELEIYQGTITHITEKNLIVDIGFKAEGAIPISEF---RENFNF 103 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 +VG++++V + ++ G+ +LS +KAK W + +A+E E + G + + KGG + Sbjct: 104 KVGEKMEVMVVKMD-YKGQCILSYQKAKIMRNWERINEAHEKGEVILGYVAARTKGGLII 162 Query: 123 ELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 E+ I FLPGS ++V+PVRD GK +E KV+K++QK NVVVS + +IE + +R Sbjct: 163 EIFDIECFLPGSHINVKPVRDYDTYVGKTMEVKVVKINQKTKNVVVSHKILIERDIEEQR 222 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 +++ L +G ++G +KN+ YGAFVDLGGVD LLHITDM+W + HP+E+V + E+ Sbjct: 223 KEMISKLDKGQVLEGKIKNILPYGAFVDLGGVDALLHITDMSWPHINHPTEVVQLEQELK 282 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 VL D+++ RV LGLKQL PW ++ G K+ G+V+ L DYG FVEI GVE Sbjct: 283 FVVLGVDKDKNRVQLGLKQLQPHPWNSLDNNLKVGNKVKGKVSVLADYGAFVEIIPGVEA 342 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHN 362 L+H+SEM W+ V +GD +E ++L ID + R++SL +KQ +PW + Sbjct: 343 LLHISEMSWSYDLSSTQDFVQIGDEIEAVILTIDRQERKMSLSVKQLTPDPWIDIQNKYP 402 Query: 363 KGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQV 422 G + G ++ T+FGI + L+ GI G+++ +D+SW + D++ ++L + Sbjct: 403 IGSKHVGIVRKFTNFGISLELEKGISGIIYANDLSWGKKIKHPSEFCNINDKLEVIILAL 462 Query: 423 DAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADG-VEGYLRAS 481 D + R++LG KQ+ E+P+ + + G+I G + + KGA+V+L + +E + Sbjct: 463 DPQTRRLNLGHKQITENPWEKYEKIYYVGSIHNGFIVNLFDKGASVKLLNDQIEDFQEIE 522 Query: 482 EASRDRV--EDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQED 539 S R + L ++ K +++ + I +S + ++ T + Sbjct: 523 AFSPLRFLEKKDGSTLKKEEKSNFKVIEFNKETKKIVVSHTSIYREKDQKKEKTRVRNRK 582 Query: 540 ANFS 543 S Sbjct: 583 FERS 586 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 98/376 (26%), Positives = 168/376 (44%), Gaps = 22/376 (5%) Query: 172 AVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKH 230 + + L +QE +G + ++T+ VD+G +G + I++ Sbjct: 45 QEERKKFEKIYAETLPKIQELEIYQGTITHITEKNLIVDIGFKAEGAIPISEFRENF--- 101 Query: 231 PSEIVNVGDEITVKVLKFDRERTRVSLGL-KQLGEDPWVAIAKRYPEGTKLTGRVTNLTD 289 VG+++ V V+K D + + L K W I + + +G + G V T Sbjct: 102 ---NFKVGEKMEVMVVKMDY-KGQCILSYQKAKIMRNWERINEAHEKGEVILGYVAARTK 157 Query: 290 YGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKV-VNVGDVVEVMVLDIDEERRRISLG--- 345 G +EI + +E + S ++ VG +EV V+ I+++ + + + Sbjct: 158 GGLIIEIFD-IECFLPGSHIN----VKPVRDYDTYVGKTMEVKVVKINQKTKNVVVSHKI 212 Query: 346 -LKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEE 404 +++ ++ +KG +EGKIK+I +G F+ L GG+D L+H++D+SW Sbjct: 213 LIERDIEEQRKEMISKLDKGQVLEGKIKNILPYGAFVDL-GGVDALLHITDMSWPHIN-H 270 Query: 405 AVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAK 464 + E+ VVL VD ++ R+ LG+KQL P+N+ K G V GKV+ + Sbjct: 271 PTEVVQLEQELKFVVLGVDKDKNRVQLGLKQLQPHPWNSLDNNLKVGNKVKGKVSVLADY 330 Query: 465 GATVELADGVEGYLRASEASRDRV-EDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKD 523 GA VE+ GVE L SE S + +GDE+EA +DR+ R +SLSV+ Sbjct: 331 GAFVEIIPGVEALLHISEMSWSYDLSSTQDFVQIGDEIEAVILTIDRQERKMSLSVKQLT 390 Query: 524 EADEKDAIATVNKQED 539 D Sbjct: 391 PDPWIDIQNKYPIGSK 406 Score = 152 bits (385), Expect = 3e-35, Method: Composition-based stats. Identities = 57/295 (19%), Positives = 122/295 (41%), Gaps = 18/295 (6%) Query: 260 KQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPS 319 ++ E + + E G +T++T+ V+I EG + +SE Sbjct: 48 RKKFEKIYAETLPKIQELEIYQGTITHITEKNLIVDIGFKAEGAIPISEFRENFN----- 102 Query: 320 KVVNVGDVVEVMVLDIDEERRRISLGLKQCK-ANPWQQFAETHNKGDRVEGKIKSITDFG 378 VG+ +EVMV+ +D + + I L ++ K W++ E H KG+ + G + + T G Sbjct: 103 --FKVGEKMEVMVVKMDYKGQCI-LSYQKAKIMRNWERINEAHEKGEVILGYVAARTKGG 159 Query: 379 IFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVK---- 434 + I + I+ + S I+ + G + V++++ + + + + K Sbjct: 160 LIIEIFD-IECFLPGSHINVKPVRDYDT---YVGKTMEVKVVKINQKTKNVVVSHKILIE 215 Query: 435 QLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLV 494 + E+ ++ KG ++ GK+ + GA V+L GV+ L ++ S + T V Sbjct: 216 RDIEEQRKEMISKLDKGQVLEGKIKNILPYGAFVDLG-GVDALLHITDMSWPHINHPTEV 274 Query: 495 LSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAE 549 + + E++ GVD+ + L ++ + + +A+ Sbjct: 275 VQLEQELKFVVLGVDKDKNRVQLGLKQLQPHPWNSLDNNLKVGNKVKGKVSVLAD 329 >UniRef50_B5Y9T3 Ribosomal protein S1 n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y9T3_COPPD Length = 559 Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats. Identities = 156/554 (28%), Positives = 280/554 (50%), Gaps = 9/554 (1%) Query: 6 AQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA--QGELEIQ 63 + F + G +V G V+ D D + +D K ++ +P ++ + + E Sbjct: 5 EENFNQEFDVEMAERGDLVEGTVLRADVDGLWLDIASKYDAFLPLDECTSELARQVQEGN 64 Query: 64 VGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVE 123 V V+V + D G +S+++A + W +E+ + E+ G G V+ Sbjct: 65 VPTSVEVVVTRTNDDKGYISVSQKRAAYRKLWKDVEEWEKSGESRKVKAVGADDKGVFVD 124 Query: 124 LN-GIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 L GI ++P S +++R VRDT G+ L K++++++KRN +++++R V+E E Sbjct: 125 LGAGILGYVPASQLEIRFVRDTKKYVGRSLRVKILRVNRKRNQIILTQRQVLEEEQKERA 184 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEI 241 ++ L++ V+G V +TD G FVDLG G++G + ++ W+ +K+ +++ GD + Sbjct: 185 EKAWLRLKDSDIVRGHVSRITDEGIFVDLGDGIEGFVPKDELDWRPIKNIAKVFRRGDVV 244 Query: 242 TVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVE 301 KVL D E+ + L ++ +PW A+++ G ++GRV G + ++ V Sbjct: 245 RAKVLSVDEEKKEMVLSIRLATPNPWQLFAEKHNVGDVVSGRVLRYLRGGLLLLVDR-VT 303 Query: 302 GLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETH 361 GLV E+ W + + +GD V+ +L D E + + L +K+ +PW+ Sbjct: 304 GLVPAQEVSW-KRGAKVEDLYKIGDHVKAKILRFDPEAQDLILSVKEALGDPWENVERDF 362 Query: 362 NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQ 421 G + EG + +ITDFG+F+ L GI+GLV +SW ++ GD++ VVL Sbjct: 363 PVGSKAEGTVVNITDFGVFVELAPGIEGLVPRRYVSWKRF-KDINEVVNIGDQVEVVVLG 421 Query: 422 VDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRAS 481 ++ +I+L ++ DP+ V + G +V GKV + +G VE+ADGVEG++ S Sbjct: 422 INIVDRKITLSMRDTRPDPWEEVVKNIQPGQLVRGKVVTIIPQGVFVEIADGVEGFIHIS 481 Query: 482 EASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNK--QED 539 + S RV+D +S GDE+ AK G+D + R ISLSV+A E++ + ED Sbjct: 482 QLSIRRVDDPRDAVSEGDEIVAKVIGIDEERRRISLSVKAIHVDKEREELQDFLSQQGED 541 Query: 540 ANFSNNAMAEAFKA 553 ++ + Sbjct: 542 KFTLSDVLGNLLGR 555 >UniRef50_C1SLB2 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SSU ribosomal protein S1P n=2 Tax=Bacteria RepID=C1SLB2_9BACT Length = 848 Score = 400 bits (1028), Expect = e-110, Method: Composition-based stats. Identities = 194/556 (34%), Positives = 303/556 (54%), Gaps = 9/556 (1%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE 61 E F + EES + + SIV+G V I+++ VLV+ G K+E +P+ +F GE+ Sbjct: 297 MEDFEAMLEESFQ--QPEKNSIVQGTVAQINENDVLVNIGFKTEGVVPSAEFM-KDGEIT 353 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 I+VGDEVDV + G G LSR+ ++ WI +EKA E+ V + V GFT Sbjct: 354 IKVGDEVDVLFLGIAGGGGYVKLSRKAIEKEADWIEVEKALEEETPVEIKVTSVVDKGFT 413 Query: 122 VELNGIRAFLPGSLVDVRPVR-DTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 + I F+P + +D + + G E KV+K ++K+ + + SR+ + Sbjct: 414 GKCGEIECFIPENHIDFKNSTMEPQEYVGNIYEVKVLKANKKQRSFLASRKLQMIQSIEK 473 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 E+ + ++EG +KG VK + YGAF++ G VDG L ++AW VKHP++ + GDE Sbjct: 474 EKKEFFSQIEEGQILKGSVKTIKHYGAFMNFGAVDGFLRKNNIAWGVVKHPNQYIEEGDE 533 Query: 241 ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV 300 + VK+L D E ++ +GLKQ+ EDPW + +YPEG + G V + G +EIE+G+ Sbjct: 534 LEVKILNIDFEEEKLEVGLKQMQEDPWDSAYDKYPEGGTVAGTVVARKNKGFVMEIEQGI 593 Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAET 360 +G + + E+ W + + D VE ++ ID+E++++ + LK + NPW Sbjct: 594 DGFIPLEEISW---LKNARIAIEPKDAVEGKIIGIDDEKKKLIVSLKSIQENPWVTLKTK 650 Query: 361 HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL 420 H +G ++G IKSITDFGIF+ +DGL+ DISW E YK+GDEI A VL Sbjct: 651 HPEGSAIKGTIKSITDFGIFVDFGEFLDGLIRKKDISWTDEPENLDELYKEGDEIEAKVL 710 Query: 421 QVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRA 480 ++DAE+ERISLGVKQL +P+ L G +V KV AV +G VEL + G++ Sbjct: 711 KIDAEKERISLGVKQLETNPWREIGKLLPNGKVVEVKVLAVSKEGLEVELPRDLIGFIPD 770 Query: 481 SEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQ-ED 539 +E ++V D T +VGD ++A D + + I LS+R + EK + K+ Sbjct: 771 NELDVEKV-DPTDKFAVGDTIKAVVFRNDAREKKILLSIRRYMQDSEKREVKEYLKKLAQ 829 Query: 540 ANFSNNAMAEAFKAAK 555 ++ S ++ K Sbjct: 830 SDDSTFSLGNILKGKL 845 >UniRef50_C0QZM2 30S ribosomal protein S1 n=2 Tax=Brachyspira RepID=C0QZM2_BRAHW Length = 554 Score = 393 bits (1011), Expect = e-108, Method: Composition-based stats. Identities = 181/549 (32%), Positives = 287/549 (52%), Gaps = 11/549 (2%) Query: 4 SFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQ 63 F + EES G IV+G VV D V +D KSE I +F + E Sbjct: 13 EFRKALEESDNTF-LSRGKIVKGKVVQFDDTDVFIDFDSKSEGKIKRSEF-----DKEPT 66 Query: 64 VGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVE 123 +G+E++ + + ED G +LS+ + + ++ ++ A ++ +TGV+ +KGGF V Sbjct: 67 IGEEIEAIV-SGEDDKGYVILSKSEIDKRKSQELIDNAVKNNTAITGVVKEVIKGGFKVS 125 Query: 124 LNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERD 183 + G +AF P S +D+ GKE EF+VIK + +VVVSRR ++E +A + Sbjct: 126 IMGHQAFCPFSQIDLARGIKEADYIGKEYEFRVIK--KNGRDVVVSRRVLLEETQNAGIE 183 Query: 184 QLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 L NL+E + G VKN+ +GAF+++ G DG L I +M+W +V +P +++ G+E Sbjct: 184 TFLNNLKENDIINGKVKNIEKFGAFIEITPGFDGFLAIPNMSWDKVVNPKSVISKGEERM 243 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 KVL D+E +V LGLKQL EDPW ++Y G + G VTN+ +G FV++ +G+EG Sbjct: 244 FKVLHIDKENRKVDLGLKQLDEDPWGKFVEQYHIGDIINGEVTNVKKFGAFVKVADGIEG 303 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHN 362 LVHVS++ W + +PS V G +E +LD++ R+++LGLKQ K NPW + Sbjct: 304 LVHVSDLSWNSHVNNPSDFVKKGAFLECKILDMNAAERKLTLGLKQVKENPWDTVEKDFP 363 Query: 363 KGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQV 422 V+ K+K I L G++G+ +SD W K+G+E+ V++ + Sbjct: 364 VKSAVKCKVKRIIKNFAVFELPNGLEGICDISDFDWRNNIVNMKDYVKEGEEVNMVIMSI 423 Query: 423 DAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASE 482 D +++RI L K + P+ + + +G+IV G V A+ GA V L D +EGY+ S+ Sbjct: 424 DRDKQRIKLSYKHTKDSPWRLFEKAHPQGSIVDGTVKAIVDSGAIVSLEDDLEGYMHVSQ 483 Query: 483 ASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATV-NKQEDAN 541 + V+ VG+ V++ R ISLS R EA K +K E + Sbjct: 484 VEIPKGSTLEEVVKVGETYPFVVREVNQSKRRISLSRREYMEAQNKKETQNYISKAEPTS 543 Query: 542 FSNNAMAEA 550 + N Sbjct: 544 LTYNPFDNI 552 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 88/383 (22%), Positives = 152/383 (39%), Gaps = 23/383 (6%) Query: 176 SENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSEI 234 A + L G VKG V D F+D +G + ++ + Sbjct: 13 EFRKALEESDNTFLSRGKIVKGKVVQFDDTDVFIDFDSKSEGKIKRSEFDKEP------- 65 Query: 235 VNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVA-IAKRYPEGTKLTGRVTNLTDYGCF 293 +G+EI V D ++ V L ++ + I T +TG V + G Sbjct: 66 -TIGEEIEAIVSGED-DKGYVILSKSEIDKRKSQELIDNAVKNNTAITGVVKEVIKGGFK 123 Query: 294 VEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP 353 V I G + S++D +G E V+ + R + + + Sbjct: 124 VSIM-GHQAFCPFSQIDLARGIKEAD---YIGKEYEFRVIKKN--GRDVVVSRRVLLEET 177 Query: 354 W----QQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREY 409 + F + D + GK+K+I FG FI + G DG + + ++SW+ Sbjct: 178 QNAGIETFLNNLKENDIINGKVKNIEKFGAFIEITPGFDGFLAIPNMSWDKVV-NPKSVI 236 Query: 410 KKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVE 469 KG+E VL +D E ++ LG+KQL EDP+ +V G I+ G+VT V GA V+ Sbjct: 237 SKGEERMFKVLHIDKENRKVDLGLKQLDEDPWGKFVEQYHIGDIINGEVTNVKKFGAFVK 296 Query: 470 LADGVEGYLRASEASRD-RVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEK 528 +ADG+EG + S+ S + V + + + G +E K ++ R ++L ++ E Sbjct: 297 VADGIEGLVHVSDLSWNSHVNNPSDFVKKGAFLECKILDMNAAERKLTLGLKQVKENPWD 356 Query: 529 DAIATVNKQEDANFSNNAMAEAF 551 + + + F Sbjct: 357 TVEKDFPVKSAVKCKVKRIIKNF 379 >UniRef50_C5CIV0 RNA binding S1 domain protein n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CIV0_KOSOT Length = 572 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 170/562 (30%), Positives = 291/562 (51%), Gaps = 17/562 (3%) Query: 4 SFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQ 63 S + ++ + E++ R G V +I D +LV K + P + + E Sbjct: 14 SMEDILKQ-MDEVDERRGRSKTAEVHSIQPDGLLVILEGKLDGFAPESEL--VKPLKEYN 70 Query: 64 VGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVE 123 +GD+++V + V++ G +++S ++ A +E AY+ E VTG I G+ KGG+ V+ Sbjct: 71 IGDKIEVQIMKVDEDEGRSVVSEKRIYFRTALKKVENAYKSGEPVTGTILGETKGGYNVK 130 Query: 124 LNGI-RAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 L + AFLPGS +R R E EFKVI +K+ + + + + Sbjct: 131 LLNVVPAFLPGSQSGIRRGRPIPEG---EQEFKVINFRKKKRGTNIV--VSLTAFKEEKV 185 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEI 241 E L+ G V+G ++++ D+GAFV L V GL+ ++++W + +++NVGD++ Sbjct: 186 KAYFEALETGSTVEGTIESIKDFGAFVRLTNEVVGLIPASEVSWDPSQKVHDVLNVGDKV 245 Query: 242 TVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVE 301 TVKV+ D E+ ++SL LKQL EDPW + ++YP G+ + G V ++ +G FV IE GVE Sbjct: 246 TVKVIDVDPEKKKISLSLKQLQEDPWNTVEEKYPVGSVVEGVVKSIVPFGFFVMIEPGVE 305 Query: 302 GLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETH 361 GLVH+SE+ W N +++ GD V+V + DID+E+R +SL ++ +PW E + Sbjct: 306 GLVHISEVFWGNVRRDLKELIREGDRVKVKIKDIDKEKRTLSLSYREALGDPWDNIEEKY 365 Query: 362 NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQ 421 G+ V+GK+ + G + L+ + G V +S++SWN + K+ E+ +L Sbjct: 366 KVGEIVDGKVVKVLPTGAIVELEEYVSGFVPVSEMSWNFV-DRVEDVVKESSEVKTKILS 424 Query: 422 VDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELAD-GVEGYLRA 480 +D E R+ L +KQ EDP+ K G V GK+T + GA V + GVE +L A Sbjct: 425 IDKENRRMRLSLKQATEDPWQKVHTELKVGDYVEGKITRLIKSGAVVMVDGYGVEAFLPA 484 Query: 481 SEASRDRVEDATLVLSVGDEVEAKFTGV--DRKN--RAISLSVRAKDEADEKDAIATVNK 536 S+ + RVE+ + +G+ K + D + R + +S++ EK+ + Sbjct: 485 SQVAMKRVENLEDAIKIGEHRRFKIIRLVYDPEKDVRNMVVSIKQLLLDKEKEETQKALE 544 Query: 537 QEDANFSNN-AMAEAFKAAKGE 557 + S+ ++ E K + Sbjct: 545 ELSGEESSTLSLGEKLKEHLEK 566 >UniRef50_A8F7S1 RNA binding S1 domain protein n=1 Tax=Thermotoga lettingae TMO RepID=A8F7S1_THELT Length = 539 Score = 385 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 165/560 (29%), Positives = 290/560 (51%), Gaps = 28/560 (5%) Query: 1 MTESFAQL--FEESLKEIETRPGSIVRGVVVAIDK-DVVLVDAGLKSESAIPAEQFKNAQ 57 MT+ ++ F+E L +ET PGS+V VV I+ + + VD G K E I + ++ Sbjct: 1 MTDEHEKMENFQEYLDFVETNPGSVVEAVVTRINPAEGISVDFGGKGEGIIQQNELIHSI 60 Query: 58 GELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVK 117 + VG ++ + + D G LLS ++ E TL KAYE V G I + Sbjct: 61 --EKYSVGQKIKAQILKINDEEGYALLSEKRPYIREMRNTLRKAYESKIPVKGKIVQTIP 118 Query: 118 GGFTVELNGI-RAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNN--VVVSRRAVI 174 GG+ V ++ I AFLPGS ++ + KE+ F +I+ +RN +VVSR+A++ Sbjct: 119 GGYRVLISNIFDAFLPGSQSLLKRNQSFQE---KEMNFLIIEYSVRRNKLHIVVSRKALL 175 Query: 175 ESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEI 234 E + + + G E++G V+++ A +D G+ L ++M+ P +I Sbjct: 176 E----RLKKEFFNTHKVGDEIEGTVESIRMNHAIIDFDGIKAFLPRSEMSHDPSVSPDDI 231 Query: 235 VNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFV 294 + D+I VK+++ + R+ +++ LK L DPW+ +++RY GT + G V ++ +G F+ Sbjct: 232 LKKNDQIKVKIIEINPARSSITVSLKALEPDPWLKVSERYSVGTVVQGTVKSIMPFGIFL 291 Query: 295 EIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPW 354 +E G++GL+H+SE+ WT+K K +G +V+ V++ID E+ RI+L K+ K +PW Sbjct: 292 NLEPGLDGLIHISEVFWTSKKADLHKYFKIGQIVQAEVIEIDPEKHRIALSYKKAKGDPW 351 Query: 355 QQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDE 414 ++ + +N+GD V GKI I G+ + L+ G+ G V S++SWN ++ +K+ D Sbjct: 352 EEVVQKYNEGDVVSGKIVRILPAGVIVELEDGVSGFVPKSELSWNKV-KDPTDLFKEKDR 410 Query: 415 IAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELAD-G 473 + +L +D ++ R+ L VKQL DP++ V + ++ V + G +EL D Sbjct: 411 LNVKILSIDKQKRRMRLSVKQLTPDPWDEVVTKLSENSVAKALVKSKVNSGFIIELKDFS 470 Query: 474 VEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIAT 533 ++G + AS A L GDEVE + + R + +S + + EK A Sbjct: 471 IDGLMPAS--------HADESLKEGDEVEVLVLRLIPERRKLLVSQKKLE---EKKAYEE 519 Query: 534 VNKQEDANFSNNAMAEAFKA 553 + D + + + K+ Sbjct: 520 YKSKIDESTVKRTLGDRMKS 539 >UniRef50_C3XIZ7 30s ribosomal protein s1 n=6 Tax=Campylobacterales RepID=C3XIZ7_9HELI Length = 562 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 158/552 (28%), Positives = 285/552 (51%), Gaps = 13/552 (2%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEI 62 E FA + S + + + G +V ID + V++D K E + ++ K++ G L Sbjct: 17 EDFATMLSRSEQSED---NVLREGKIVKIDDESVMIDVQDKKEGRMSIDEIKDSNGNLLF 73 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 + GD + V + + + K L Y+ + V GVI GK KGG+ V Sbjct: 74 KQGDSILVHVSKKGGLRVSYKKAIKYEKVVNEIKALGTDYK-DKVVEGVIRGKNKGGYIV 132 Query: 123 E-LNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 E NG+ F+P + +D + GK ++ ++ + N++V+SR+ +++ +A+ Sbjct: 133 ESANGVEYFMPRHYSALSRDKDDSKVVGKPIKACIVDIRPNGNSIVISRKRYLDTHTAAQ 192 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEI 241 ++ + L G+ +G+VKN+T +G FV++G VDGL+H T+++ + +P + VGD++ Sbjct: 193 KENAKKILDSGLAYEGVVKNVTKFGLFVEIGSVDGLVHFTEISHRGPVNPEKHYKVGDKV 252 Query: 242 TVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVE 301 VK L+++ E+ R+SL ++ L +DPW I G + V+N+ DYG FV++ VE Sbjct: 253 QVKPLEYNEEKNRLSLSIRALFDDPWKEIKDEIKVGYVIRVTVSNIEDYGAFVDLGNDVE 312 Query: 302 GLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETH 361 G +H+SEM W PS + VG+ + V V++ID + RR+ + LK+ + P+ +F + H Sbjct: 313 GFLHISEMSWDKNIKQPSDCLKVGEEINVEVIEIDPDNRRLRVSLKKLQDKPFVRFTKEH 372 Query: 362 NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQ 421 GD ++GK+ +IT+FG F+ L +DGL+H D W+ ++ E+K GD I + + Sbjct: 373 KVGDVIKGKVATITNFGAFVNLGA-VDGLLHNEDAFWDK-SKKCADEFKVGDSIEVKIDK 430 Query: 422 VDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELA-DGVEGYLRA 480 +D E+ISL + L E P + ++G+V + G +++ + ++ +R Sbjct: 431 IDTANEKISLNRRYLVESPSEQFAKKYAIDDEISGQVIDIKDFGVFIKVENENIDALIRN 490 Query: 481 SEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDA 540 + A + VGD ++ VDRK + LSVR + E+ + N E Sbjct: 491 EDLGNI----ARDSIKVGDTIKGALVQVDRKANRVRLSVRRLQKKKERQELNDYNSDEKV 546 Query: 541 NFSNNAMAEAFK 552 + + + FK Sbjct: 547 T-LGDTLGDKFK 557 >UniRef50_Q3YRK4 SSU ribosomal protein S1P n=21 Tax=Rickettsiales RepID=Q3YRK4_EHRCJ Length = 567 Score = 381 bits (978), Expect = e-104, Method: Composition-based stats. Identities = 203/531 (38%), Positives = 319/531 (60%), Gaps = 18/531 (3%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE 61 + F +E + + + G I+ G +V IDK V +D+GLKSES + ++F+ Sbjct: 42 SSEFQNALKEFIDD-SVKEGQIIEGTIVCIDKGYVTIDSGLKSESIVSLKEFELGDDYQN 100 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 I +G +V + L+ +E G +LSREKA R E W LE+A E E V GVI +K G+T Sbjct: 101 IGIGSKVKLYLEKIEGRNGSVVLSREKAIRDELWQKLEEAAERKEDVEGVIFSSIKCGYT 160 Query: 122 VELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 V++ G+ AFLP S V +R V+D L GK+ +F+++K+D K+ N+VVSR+A++E + Sbjct: 161 VDIKGVVAFLPASHVALRQVKDITPLLGKKQKFRILKMDNKQGNIVVSRKAILEESLADA 220 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDL------GGVDGLLHITDMAWKRVKHPSEIV 235 + L L EG ++G VK++T YG F+++ G VDGLLHITD++W RV HPS + Sbjct: 221 KSLYLSQLNEGDIIEGKVKSITKYGVFIEIHESPSVGVVDGLLHITDISWSRVSHPSAVF 280 Query: 236 NVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVE 295 + G + K++K DRE ++SLG+KQL E PW I K+YP + G VT++ DYG FVE Sbjct: 281 SCGQTVKTKIIKIDRENKKISLGVKQLEESPWSNIEKKYPVDSIHKGIVTSIEDYGVFVE 340 Query: 296 IEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQ 355 +E G+EGLVHVSE+ WT ++ +++ G+ ++V VL ID + R+SL +K+C+ NPWQ Sbjct: 341 LETGIEGLVHVSEVSWTKNSLPINQLFMRGEEIQVKVLSIDTAKSRMSLSMKRCQENPWQ 400 Query: 356 QFAETHNKGDRVEGKIKSITDFGIFIGLD-----GGIDGLVHLSDISWNVAGEEAVREYK 410 F + G V KIK+IT+ GIF+ + GI+GL+ +++SW+++ E AV++Y Sbjct: 401 AFTLKYPLGSVVSTKIKNITNLGIFVSFEDNTLNDGIEGLIRTTELSWSLSPEAAVKKYS 460 Query: 411 KGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVD-AKGATVE 469 GD + A +L ++ + +I LGVKQL DPF + + G + VT V G V+ Sbjct: 461 IGDSVEAKILMINPNKSKIDLGVKQLEYDPFLDLLKKTNLGDKIPVTVTKVVEDTGILVD 520 Query: 470 LADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 + +G + E ++ + D GD++EA+ ++ N + LS++ Sbjct: 521 VFNGSNSFNLLIE--QEYLPD-NKKFFPGDKLEAEVLLIETYN--MVLSLK 566 Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats. Identities = 121/479 (25%), Positives = 233/479 (48%), Gaps = 29/479 (6%) Query: 90 KRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHL-- 147 ++ ++ + ++ + + G I KG T++ S+V ++ Sbjct: 45 FQNALKEFIDDSVKEGQIIEGTIVCIDKGYVTID----SGLKSESIVSLKEFELGDDYQN 100 Query: 148 --EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDY 205 G +++ + K++ + +VV+SR I E + ++ E +V+G++ + Sbjct: 101 IGIGSKVKLYLEKIEGRNGSVVLSREKAIRDELWQKLEEAAERK---EDVEGVIFSSIKC 157 Query: 206 GAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGED 265 G VD+ GV L + +A ++VK + ++ G + ++LK D ++ + + K + E+ Sbjct: 158 GYTVDIKGVVAFLPASHVALRQVKDITPLL--GKKQKFRILKMDNKQGNIVVSRKAILEE 215 Query: 266 P----WVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEG-----VEGLVHVSEMDWTNKNI 316 + EG + G+V ++T YG F+EI E V+GL+H++++ W+ + Sbjct: 216 SLADAKSLYLSQLNEGDIIEGKVKSITKYGVFIEIHESPSVGVVDGLLHITDISWS-RVS 274 Query: 317 HPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITD 376 HPS V + G V+ ++ ID E ++ISLG+KQ + +PW + + +G + SI D Sbjct: 275 HPSAVFSCGQTVKTKIIKIDRENKKISLGVKQLEESPWSNIEKKYPVDSIHKGIVTSIED 334 Query: 377 FGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQL 436 +G+F+ L+ GI+GLVH+S++SW + + +G+EI VL +D + R+SL +K+ Sbjct: 335 YGVFVELETGIEGLVHVSEVSWTKNSLPINQLFMRGEEIQVKVLSIDTAKSRMSLSMKRC 394 Query: 437 AEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELAD-----GVEGYLRASEASRD-RVED 490 E+P+ + G++V+ K+ + G V D G+EG +R +E S E Sbjct: 395 QENPWQAFTLKYPLGSVVSTKIKNITNLGIFVSFEDNTLNDGIEGLIRTTELSWSLSPEA 454 Query: 491 ATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAE 549 A S+GD VEAK ++ I L V+ + D + N + + + E Sbjct: 455 AVKKYSIGDSVEAKILMINPNKSKIDLGVKQLEYDPFLDLLKKTNLGDKIPVTVTKVVE 513 Score = 207 bits (528), Expect = 8e-52, Method: Composition-based stats. Identities = 88/422 (20%), Positives = 178/422 (42%), Gaps = 25/422 (5%) Query: 142 RDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKN 201 D L K K I + + + + ++ D ++++EG ++G + Sbjct: 13 EDYLQNIKKIKSNKFISHNLEAEDSEDDNSSEFQNALKEFID---DSVKEGQIIEGTIVC 69 Query: 202 LTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEI--VNVGDEITVKVLKFDRERTRVSLGL 259 + +D GL + ++ K + + + +G ++ + + K + V L Sbjct: 70 IDKGYVTID----SGLKSESIVSLKEFELGDDYQNIGIGSKVKLYLEKIEGRNGSVVLSR 125 Query: 260 -KQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHP 318 K + ++ W + + + G + + G V+I+ GV + S + + Sbjct: 126 EKAIRDELWQKLEEAAERKEDVEGVIFSSIKCGYTVDIK-GVVAFLPASHVAL-RQVKDI 183 Query: 319 SKVVNVGDVVEVMVLDIDEERRRISLGLKQCKA----NPWQQFAETHNKGDRVEGKIKSI 374 + ++ G + +L +D ++ I + K + + N+GD +EGK+KSI Sbjct: 184 TPLL--GKKQKFRILKMDNKQGNIVVSRKAILEESLADAKSLYLSQLNEGDIIEGKVKSI 241 Query: 375 TDFGIFIGLDGG-----IDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERI 429 T +G+FI + +DGL+H++DISW+ + G + ++++D E ++I Sbjct: 242 TKYGVFIEIHESPSVGVVDGLLHITDISWSRVS-HPSAVFSCGQTVKTKIIKIDRENKKI 300 Query: 430 SLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVE 489 SLGVKQL E P++N +I G VT+++ G VEL G+EG + SE S + Sbjct: 301 SLGVKQLEESPWSNIEKKYPVDSIHKGIVTSIEDYGVFVELETGIEGLVHVSEVSWTKNS 360 Query: 490 DA-TLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMA 548 + G+E++ K +D +SLS++ E + + + Sbjct: 361 LPINQLFMRGEEIQVKVLSIDTAKSRMSLSMKRCQENPWQAFTLKYPLGSVVSTKIKNIT 420 Query: 549 EA 550 Sbjct: 421 NL 422 >UniRef50_D0RRD0 30S ribosomal protein S1 n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RRD0_9RICK Length = 570 Score = 380 bits (977), Expect = e-104, Method: Composition-based stats. Identities = 174/554 (31%), Positives = 303/554 (54%), Gaps = 8/554 (1%) Query: 4 SFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDA-GLKSESAIPAEQFKNAQGELEI 62 FA+L E+L+ I + SIV G V +D V V G KS + + +A+ + Sbjct: 17 EFAKLITENLENIILKDNSIVTGSVEKVDDKYVHVFIKGAKSSGLVDINEIPHAEL-DGL 75 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 + G E++V L+ ED G +LS EKA+R ++W +E+A+E E V+G+I VKGG V Sbjct: 76 EEGKEIEVFLERTEDRNGNIVLSIEKARRAKSWKKIEEAFEKQEKVSGIIKNTVKGGVVV 135 Query: 123 ELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 E+ G+ AF P S V RP+++ K +EF++IK+D R NV+ SRR VIE E + + Sbjct: 136 EIFGVFAFCPNSQVADRPIKNMNEYMNKPMEFQIIKIDNVRMNVIASRRQVIEQEKNKNK 195 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 +++++N + G V+G +K + YG FV + +D LLH ++++ ++ + +++ VG++I Sbjct: 196 EKVIKNYKVGDVVEGTIKAVQSYGCFVSIESLDCLLHSSEVSHLKISNLNDMFTVGEKIK 255 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 VKVL+ D E R+SL +K + DP+ I ++ G + ++ LTD+G F E++EG+ G Sbjct: 256 VKVLEIDNENMRMSLSVKAMLPDPFETIKDKFSIGNEYEVKIVKLTDFGAFAEMQEGIVG 315 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHN 362 L+H SE+ KN++P +GD V+V + ++D E+R+I+L K C NP +F + + Sbjct: 316 LIHTSEIKHMQKNVNPKSAFKIGDTVKVKLKEVDTEKRKIALSYKDCLPNPVDEFIKKYP 375 Query: 363 KGDRVEGKIKSITDFGIFIGLDGG-IDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQ 421 G V+ K+ + DFGIF ID VH + + + + + KGDE+ + Sbjct: 376 IGTTVKTKVVTKKDFGIFCNTGDNDIDIFVHYKQLDYAESSKAL-DNFNKGDEVELKI-- 432 Query: 422 VDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELAD-GVEGYLRA 480 +D + ++++ ++ L +DPF+ + K G IV+ +V V G V++ + +R Sbjct: 433 IDIKDDKVNGSIRALKKDPFSFFDDK-KIGDIVSTRVVEVQDNGLKVDVGPERYQTIIRK 491 Query: 481 SEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDA 540 SE + ++ + S GD ++A +D + R + LSV+ ++ +AI Sbjct: 492 SELALEKSDQRPNRFSSGDSIDAAILELDAEKRRVKLSVKKLEQQQADEAIEKYGSTSSG 551 Query: 541 NFSNNAMAEAFKAA 554 + EA + Sbjct: 552 QSLAGILGEALEKK 565 >UniRef50_Q9ZKF6 30S ribosomal protein S1 n=44 Tax=Epsilonproteobacteria RepID=RS1_HELPJ Length = 552 Score = 380 bits (977), Expect = e-104, Method: Composition-based stats. Identities = 159/554 (28%), Positives = 287/554 (51%), Gaps = 19/554 (3%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKD--VVLVDAGLKSESAIPAEQFKNAQGE 59 E FA+L E KE G+I G++V+I+++ +V G K+E + + + +G+ Sbjct: 14 EEDFAKLLE---KEETLEKGTIKEGLIVSINENDGYAMVSVGGKTEGRLALNEITDEKGQ 70 Query: 60 LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYED--AETVTGVINGKVK 117 L Q D + V + E G ++ ++ + + +E+ E+ + G I GK K Sbjct: 71 LMYQKNDPIVVHV--SEKGEHPSVSYKKAISQQKIQAKIEELGENYENAIIEGKIVGKNK 128 Query: 118 GGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESE 177 GG+ VE G+ FL S ++ + GK ++ +I++D++ +++ +SR+ E Sbjct: 129 GGYIVESQGVEYFLSRSHSSLKNDAN---HIGKRIKACIIRVDKENHSINISRKRFFEVN 185 Query: 178 NSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNV 237 + + + E L+ V G+V+ +T +G FV G+DGL+H ++++ K +P + Sbjct: 186 DKRQLEISKELLEATEPVLGVVRQITPFGIFVKFKGIDGLVHYSEISHKGPVNPEKYYKE 245 Query: 238 GDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE 297 GDE+ VK + +D E+ R+SL +K EDPW I + G + V+N+ YG FV+I Sbjct: 246 GDEVYVKAIAYDEEKRRLSLSIKATIEDPWEEIQDKLKPGYAIKVVVSNIEHYGVFVDIG 305 Query: 298 EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQF 357 +EG +HVSE+ W HPS ++VG ++V ++DID + RR+ + LKQ P+ F Sbjct: 306 NDIEGFLHVSEISWDKNVSHPSHYLSVGQEIDVKIIDIDPKNRRLRVSLKQLTNRPFDVF 365 Query: 358 AETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAA 417 H GD VEGK+ ++TDFG F+ L GG+DGL+H D W+ ++ YK GD I Sbjct: 366 ESKHQVGDIVEGKVATLTDFGAFLNL-GGVDGLLHNHDAFWDKD-KKCKDHYKIGDVIKV 423 Query: 418 VVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGY 477 +L+++ + ++ISL K L P + +K +++ GKV ++ G + ADG++ Sbjct: 424 KILKINKKDKKISLSAKHLVTSPTEEFAQKHKTDSVIQGKVVSIKDFGVFIH-ADGIDVL 482 Query: 478 LRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQ 537 ++ + + + + +G E+ +++ N + SV + EK+ + N Sbjct: 483 IKNEDLNPLK----KDEIKIGQEITCVVVAIEKSNNKVRASVHRLERKKEKEELQAFNTS 538 Query: 538 EDANFSNNAMAEAF 551 +D + + E Sbjct: 539 DDKMTLGDILKEKL 552 >UniRef50_Q30ZT8 SSU ribosomal protein S1P n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30ZT8_DESDG Length = 482 Score = 380 bits (976), Expect = e-104, Method: Composition-based stats. Identities = 157/454 (34%), Positives = 243/454 (53%), Gaps = 10/454 (2%) Query: 2 TESFAQLFEESLKE--IETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE 59 ++SFA L ++ E R G V+G VVA+D+ V + G K + I AE+ K+ +G Sbjct: 10 SDSFADLLDQYSPEAGSPLRVGEKVKGSVVAMDESSVFIATGSKVDGVIDAEELKDKEGN 69 Query: 60 LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGG 119 + VGDE+D+ + A+ G A + + L +A+E+ V G + + KGG Sbjct: 70 VTCAVGDELDLYVVAITQGEVRLS---RSAGSAGSAMALTEAFENGVPVEGKVTAQCKGG 126 Query: 120 FTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 F VE+ RAF P S +D R V + G+ +F + + + NVVVSRR ++E++ Sbjct: 127 FNVEVMQRRAFCPVSQIDSRFVENPEEYLGQTFQFMITRCENNGRNVVVSRRVLLEAQQE 186 Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVG 238 R + ++ L EG V + LT++GAF +L GV+GL+HI+++ W RV+ E V G Sbjct: 187 ESRKEYMKTLNEGDVVDVCITRLTNFGAFAELAPGVEGLIHISELGWARVQSADEAVTQG 246 Query: 239 DEITVKVLKFDRERT--RVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI 296 D + KVLK + R++L KQ+ EDPW +A R GT + G+V T +G FVE+ Sbjct: 247 DTLRAKVLKIESTAKGLRIALSAKQVMEDPWNTVADRLAAGTVVEGKVVRCTPFGAFVEV 306 Query: 297 EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQ 356 G+EGLVH+SEM WT + + VV GD V V + DID +RRISL L++ + +PW Sbjct: 307 LPGIEGLVHISEMSWTRRILKAEDVVIPGDTVSVKIKDIDSAKRRISLSLREAEGDPWDG 366 Query: 357 FAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIA 416 AE G V G ++ FG+F+ + GI GL+ S IS A + + K GD + Sbjct: 367 AAEKFAPGTEVTGTVEKCAKFGMFVNIAPGITGLLPQSRIS--AAPKSGLAGCKPGDTVT 424 Query: 417 AVVLQVDAERERISLGVKQLAEDPFNNWVALNKK 450 V++++ +++L K A A + Sbjct: 425 LAVMEINPAERKVTLTTKDAARQEDAEIPASYRV 458 Score = 298 bits (762), Expect = 5e-79, Method: Composition-based stats. Identities = 109/492 (22%), Positives = 198/492 (40%), Gaps = 20/492 (4%) Query: 75 VEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFLPG 133 + D +T + E V G + + + + + Sbjct: 1 MTDDQNQTGSDSFADLLDQYSPEAGSPLRVGEKVKGSVVAMDESSVFIATGSKVDGVIDA 60 Query: 134 SLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGM 193 + + + G EL+ V+ + Q + R+ + ++ + EN G+ Sbjct: 61 EELKDKEG-NVTCAVGDELDLYVVAITQGEVRLS---RSAGSAGSAMALTEAFEN---GV 113 Query: 194 EVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERT 253 V+G V G V++ ++ + + V++P E + G + + + Sbjct: 114 PVEGKVTAQCKGGFNVEVMQRRAFCPVSQIDSRFVENPEEYL--GQTFQFMITRCENNGR 171 Query: 254 RVSLGLKQL----GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEM 309 V + + L E+ K EG + +T LT++G F E+ GVEGL+H+SE+ Sbjct: 172 NVVVSRRVLLEAQQEESRKEYMKTLNEGDVVDVCITRLTNFGAFAELAPGVEGLIHISEL 231 Query: 310 DWTNKNIHPSKVVNVGDVVEVMVLDIDEERR--RISLGLKQCKANPWQQFAETHNKGDRV 367 W + + V GD + VL I+ + RI+L KQ +PW A+ G V Sbjct: 232 GWA-RVQSADEAVTQGDTLRAKVLKIESTAKGLRIALSAKQVMEDPWNTVADRLAAGTVV 290 Query: 368 EGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERE 427 EGK+ T FG F+ + GI+GLVH+S++SW +A GD ++ + +D+ + Sbjct: 291 EGKVVRCTPFGAFVEVLPGIEGLVHISEMSWTRRILKAEDVVIPGDTVSVKIKDIDSAKR 350 Query: 428 RISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDR 487 RISL +++ DP++ G VTG V G V +A G+ G L S S Sbjct: 351 RISLSLREAEGDPWDGAAEKFAPGTEVTGTVEKCAKFGMFVNIAPGITGLLPQSRISAAP 410 Query: 488 VEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSN--N 545 GD V ++ R ++L+ + ++ + A+ Q ++ Sbjct: 411 KSGLAG-CKPGDTVTLAVMEINPAERKVTLTTKDAARQEDAEIPASYRVQPKSSQGGGFG 469 Query: 546 AMAEAFKAAKGE 557 + +A K A + Sbjct: 470 TLGQALKDALNK 481 >UniRef50_D1B5G8 RNA binding S1 domain protein n=3 Tax=Synergistaceae RepID=D1B5G8_THEAS Length = 504 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 154/442 (34%), Positives = 259/442 (58%), Gaps = 9/442 (2%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEI 62 E+ + E+ + + GS+V G VV +D LVD G K E +P ++ + ++ Sbjct: 18 ETMESIMEQ-IDSVNIHRGSVVEGTVVDAREDGWLVDVGYKCEGFLPRREWSHRAIVEKV 76 Query: 63 ---QVGDEVDVALDAV-EDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 QVGD + V + V + + LSR + + E W LE+ ++ + KVKG Sbjct: 77 GEPQVGDRIRVQVTNVGQGEEAQLNLSRWRCEFDERWNALEEKLAQSDVIEVEGIRKVKG 136 Query: 119 GFTVELNGIRAFLPGSLVDVR-PVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESE 177 G V+ G+ F+P S + + +L GK K+++ D+++ +V+SRR++++ E Sbjct: 137 GLIVDCCGLEGFIPISHLAEEGRGINPANLVGKTFPVKLVEKDRRKRRLVLSRRSILDEE 196 Query: 178 NSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNV 237 ++ R++ N+ EG ++G V ++T +G FV+LG ++GL+HIT+++W+R ++V Sbjct: 197 MASLREEFYANVHEGDILEGEVSSITSFGVFVNLGAMEGLVHITELSWQRGAKAKDLVQK 256 Query: 238 GDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE 297 GD++ VKV+ DRE RVSL LKQ EDPWV + R+ G + G VTNL D+G FVEIE Sbjct: 257 GDKVKVKVIGIDRENNRVSLSLKQAQEDPWVGVTSRWTVGQRTKGVVTNLADFGAFVEIE 316 Query: 298 EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQF 357 GVEGL+H+ ++ W+ + HP +V+ G VEV++L++D +RRRI LGLKQ +PW Sbjct: 317 PGVEGLIHIGDLSWS-RVKHPKEVLKKGQEVEVVILEVDGDRRRIGLGLKQLN-DPWANV 374 Query: 358 AETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAA 417 +E ++K V K+ + DFG F+ ++ G++GL+H+S +S + ++G E+ A Sbjct: 375 SEKYSKDQVVTVKVVRLADFGAFVEIEDGVEGLIHISQLSRQRVEK-PSDVLREGQEVQA 433 Query: 418 VVLQVDAERERISLGVKQLAED 439 +L+V+ +RI L ++ L E Sbjct: 434 KILEVNPSEKRIRLSLRALEEP 455 Score = 316 bits (809), Expect = 2e-84, Method: Composition-based stats. Identities = 132/462 (28%), Positives = 218/462 (47%), Gaps = 16/462 (3%) Query: 71 ALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRA 129 +D + + V G + + G+ V++ Sbjct: 1 MVDGLTMNNSGVSEPEPETMESIMEQIDSVNIHRGSVVEGTVVDAREDGWLVDVGYKCEG 60 Query: 130 FLPGSLVDVRPVRDT--LHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLE 187 FLP R + + G + +V + Q + R E + L E Sbjct: 61 FLPRREWSHRAIVEKVGEPQVGDRIRVQVTNVGQGEEAQLNLSR--WRCEFDERWNALEE 118 Query: 188 NLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAW-KRVKHPSEIVNVGDEITVKVL 246 L + ++ G VD G++G + I+ +A R +P+ + VG VK++ Sbjct: 119 KLAQSDVIEVEGIRKVKGGLIVDCCGLEGFIPISHLAEEGRGINPANL--VGKTFPVKLV 176 Query: 247 KFDRERTRVSLGLKQLGEDPWVAIAKRY----PEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 + DR + R+ L + + ++ ++ + + EG L G V+++T +G FV + +EG Sbjct: 177 EKDRRKRRLVLSRRSILDEEMASLREEFYANVHEGDILEGEVSSITSFGVFVNLGA-MEG 235 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHN 362 LVH++E+ W + +V GD V+V V+ ID E R+SL LKQ + +PW Sbjct: 236 LVHITELSW-QRGAKAKDLVQKGDKVKVKVIGIDRENNRVSLSLKQAQEDPWVGVTSRWT 294 Query: 363 KGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQV 422 G R +G + ++ DFG F+ ++ G++GL+H+ D+SW+ + KKG E+ V+L+V Sbjct: 295 VGQRTKGVVTNLADFGAFVEIEPGVEGLIHIGDLSWSRV-KHPKEVLKKGQEVEVVILEV 353 Query: 423 DAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASE 482 D +R RI LG+K DP+ N K +VT KV + GA VE+ DGVEG + S+ Sbjct: 354 DGDRRRIGLGLK-QLNDPWANVSEKYSKDQVVTVKVVRLADFGAFVEIEDGVEGLIHISQ 412 Query: 483 ASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDE 524 SR RVE + VL G EV+AK V+ + I LS+RA +E Sbjct: 413 LSRQRVEKPSDVLREGQEVQAKILEVNPSEKRIRLSLRALEE 454 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 97/369 (26%), Positives = 173/369 (46%), Gaps = 13/369 (3%) Query: 188 NLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVL 246 N+ G V+G V + + G VD+G +G L + + + + VGD I V+V Sbjct: 31 NIHRGSVVEGTVVDAREDGWLVDVGYKCEGFLPRREWSHRAIVEKVGEPQVGDRIRVQVT 90 Query: 247 KFDR-ERTRVSLGL-KQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLV 304 + E +++L + ++ W A+ ++ + + G V+ G+EG + Sbjct: 91 NVGQGEEAQLNLSRWRCEFDERWNALEEKLAQSDVIEVEGIRKVKGGLIVDCC-GLEGFI 149 Query: 305 HVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPW----QQFAET 360 +S + + I+P+ +V G V +++ D +RR+ L + ++F Sbjct: 150 PISHLAEEGRGINPANLV--GKTFPVKLVEKDRRKRRLVLSRRSILDEEMASLREEFYAN 207 Query: 361 HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL 420 ++GD +EG++ SIT FG+F+ L ++GLVH++++SW + A +KGD++ V+ Sbjct: 208 VHEGDILEGEVSSITSFGVFVNLGA-MEGLVHITELSWQRGAK-AKDLVQKGDKVKVKVI 265 Query: 421 QVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRA 480 +D E R+SL +KQ EDP+ + G G VT + GA VE+ GVEG + Sbjct: 266 GIDRENNRVSLSLKQAQEDPWVGVTSRWTVGQRTKGVVTNLADFGAFVEIEPGVEGLIHI 325 Query: 481 SEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDA 540 + S RV+ VL G EVE VD R I L ++ + + +K + Sbjct: 326 GDLSWSRVKHPKEVLKKGQEVEVVILEVDGDRRRIGLGLKQLN-DPWANVSEKYSKDQVV 384 Query: 541 NFSNNAMAE 549 +A+ Sbjct: 385 TVKVVRLAD 393 >UniRef50_Q7VJV6 Ribosomal protein S1 n=3 Tax=Helicobacter RepID=Q7VJV6_HELHP Length = 552 Score = 376 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 161/553 (29%), Positives = 286/553 (51%), Gaps = 19/553 (3%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDA-GLKSESAIPAEQFKNAQGEL 60 E FA LFE S K+ + G+I G +VAI + +V KSE+ + + ++ G L Sbjct: 14 EEDFAALFEASEKKADA--GAIQIGEIVAITDEYAMVALANEKSEAMLRLGEIQDDNGNL 71 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDA-ETVTGVINGKVKGG 119 + D+++V + G + + + A + + + K KGG Sbjct: 72 LFNINDKIEVFVTPGRGGRPNASYKKALKSKRIVEKIAQIADNYQDKIIEAKVIKKNKGG 131 Query: 120 FTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 F +E +GI F+P +R GK + ++ ++++ N+++VSR+ E ++ Sbjct: 132 FILEYDGIDVFMPRRDSAIREDDKA---IGKIYKVAIVNINKESNSIIVSRKRFFEIDDK 188 Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGD 239 ++ + L+ KGIVK + +G FVD+ GV+GL+H T+++ K +P++ GD Sbjct: 189 NRQNVSAKLLENDGVQKGIVKKIAPFGVFVDVYGVEGLVHYTELSHKGPINPAKNFKEGD 248 Query: 240 EITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEG 299 E+ VKVL +D ++ R+SL +K LG+DPW I K G + V+N+ YG FV++ Sbjct: 249 EVVVKVLGYDEKKRRLSLSMKALGDDPWKEIEKELEVGYSIKVSVSNIEPYGAFVDLGND 308 Query: 300 VEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAE 359 +EG +H+SE+ W HPS +NVG ++V +++ID + +R+ + LK+ P+ FA+ Sbjct: 309 IEGFLHISEISWDKNIKHPSSYLNVGQEIDVEIIEIDTDNKRLRVSLKKLLDKPFVYFAK 368 Query: 360 THNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVV 419 TH G+ ++GKI ++TDFG F+ L GG+DGL+H D W+ + +K GDEI + Sbjct: 369 THQVGEIIKGKIATLTDFGAFVNL-GGVDGLLHNEDAYWDKKSK-CKDGFKVGDEIEVKI 426 Query: 420 LQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLR 479 +++D E ER+SL K L P + +K + G + + G +++ + +E +R Sbjct: 427 IKIDKEHERVSLSKKLLEHSPAREFGKTHKVDDVARGSIIDIKDFGIFIKIDE-MEALIR 485 Query: 480 ASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQED 539 + + ED L G+E+E T +D +N + S++ + EK+ + N +E Sbjct: 486 NEDIQPLKKED----LKAGEEIECVITHIDEENNKVRASIKRLERQKEKETLKAFNSEEK 541 Query: 540 ANFSNNAMAEAFK 552 + + K Sbjct: 542 M-----TLGDKLK 549 >UniRef50_B8DPH9 RNA binding S1 domain protein n=4 Tax=Desulfovibrio vulgaris RepID=B8DPH9_DESVM Length = 564 Score = 374 bits (960), Expect = e-102, Method: Composition-based stats. Identities = 145/441 (32%), Positives = 234/441 (53%), Gaps = 17/441 (3%) Query: 4 SFAQLFEE-SLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEI 62 SFA L E S R G V+ VVAI +D V V G K + + ++ ++A+G L + Sbjct: 50 SFADLLEAHSGAAETVRTGERVKATVVAIGEDTVFVATGAKVDGLVDRKELEDAEGNLPV 109 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 VGD +++ + + + +E A + G + G KGGF V Sbjct: 110 AVGDVLELYVVSANANEIKLS---RAMGGQVGLAQMEDALNAGIPIEGKVTGPCKGGFNV 166 Query: 123 ELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 E+ RAF P S +D+RP + G+ +F + +L+Q N+VVSRR ++E E + Sbjct: 167 EVLKRRAFCPASQMDLRPGAEPDSFTGQTFQFLITRLEQNGRNIVVSRRMLLEREQAESL 226 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEI 241 L+EN++EG ++G V L +GAFV++ G++G++H+++++W RV+ E V+VGD++ Sbjct: 227 SALMENVKEGDVLEGTVARLAPFGAFVEIAPGLEGMVHVSELSWSRVQQADEAVSVGDKV 286 Query: 242 TVKVLKF----------DRERT-RVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDY 290 VKVL D + R+SL ++Q+ DPW +A R LTG+VT L + Sbjct: 287 RVKVLGIAGAEEGKGGKDSRKGPRISLSIRQVSGDPWQDVADRLDADQILTGKVTRLAPF 346 Query: 291 GCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCK 350 G F+E+ GVEGLVH+SEM WT + P + V G+ V V + ++D R+R+SL L+ + Sbjct: 347 GAFIEVLPGVEGLVHLSEMSWTRRINKPEEAVTPGETVSVRIKELDPARKRLSLSLRDAE 406 Query: 351 ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYK 410 +PW E G V G ++ FG+F+ L G+ GL+ + ++ + Sbjct: 407 GDPWSTVEERFPAGSTVTGTVEKRAPFGLFVNLAPGVTGLLP-NAVAATSPQSKTYAGLN 465 Query: 411 KGDEIAAVVLQVDAERERISL 431 G E++ VV +D + RISL Sbjct: 466 PGAEVSLVVRDLDVKARRISL 486 Score = 281 bits (720), Expect = 4e-74, Method: Composition-based stats. Identities = 113/477 (23%), Positives = 189/477 (39%), Gaps = 28/477 (5%) Query: 88 KAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRPVRDTLH 146 A EA + E V + + V + + ++ + Sbjct: 51 FADLLEAHSGAAETVRTGERVKATVVAIGEDTVFVATGAKVDGLVDRKELEDAEG-NLPV 109 Query: 147 LEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYG 206 G LE V+ + + + + + L G+ ++G V G Sbjct: 110 AVGDVLELYVVSANANEIKLSRAMGGQVGLAQMEDA------LNAGIPIEGKVTGPCKGG 163 Query: 207 AFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGED- 265 V++ + M + P G + + ++ + + + L E Sbjct: 164 FNVEVLKRRAFCPASQMDLRPGAEPDSF--TGQTFQFLITRLEQNGRNIVVSRRMLLERE 221 Query: 266 ---PWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVV 322 A+ + EG L G V L +G FVEI G+EG+VHVSE+ W+ + + V Sbjct: 222 QAESLSALMENVKEGDVLEGTVARLAPFGAFVEIAPGLEGMVHVSELSWS-RVQQADEAV 280 Query: 323 NVGDVVEVMVLDI----------DEERR-RISLGLKQCKANPWQQFAETHNKGDRVEGKI 371 +VGD V V VL I D + RISL ++Q +PWQ A+ + + GK+ Sbjct: 281 SVGDKVRVKVLGIAGAEEGKGGKDSRKGPRISLSIRQVSGDPWQDVADRLDADQILTGKV 340 Query: 372 KSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISL 431 + FG FI + G++GLVHLS++SW + G+ ++ + ++D R+R+SL Sbjct: 341 TRLAPFGAFIEVLPGVEGLVHLSEMSWTRRINKPEEAVTPGETVSVRIKELDPARKRLSL 400 Query: 432 GVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDA 491 ++ DP++ G+ VTG V G V LA GV G L + A+ Sbjct: 401 SLRDAEGDPWSTVEERFPAGSTVTGTVEKRAPFGLFVNLAPGVTGLLPNAVAATSPQSKT 460 Query: 492 TLVLSVGDEVEAKFTGVDRKNRAISLSVRAK--DEADEKDAIATVNKQEDANFSNNA 546 L+ G EV +D K R ISL+ ++ DE +A K+E + Sbjct: 461 YAGLNPGAEVSLVVRDLDVKARRISLAPADATGEDDDEWRKLAQPQKREPREGRGGS 517 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 67/293 (22%), Positives = 112/293 (38%), Gaps = 25/293 (8%) Query: 271 AKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEV 330 A+ G ++ V + + FV V+GLV E++ N+ V VGDV+E+ Sbjct: 62 AETVRTGERVKATVVAIGEDTVFVATGAKVDGLVDRKELEDAEGNL----PVAVGDVLEL 117 Query: 331 MVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGL 390 V+ + I L Q + N G +EGK+ G + + Sbjct: 118 YVVSANANE--IKLSRAMGGQVGLAQMEDALNAGIPIEGKVTGPCKGGFNVEVL-KRRAF 174 Query: 391 VHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNW----VA 446 S + G E G ++ +++ I + + L E + Sbjct: 175 CPASQM-DLRPGAEPDSF--TGQTFQFLITRLEQNGRNIVVSRRMLLEREQAESLSALME 231 Query: 447 LNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFT 506 K+G ++ G V + GA VE+A G+EG + SE S RV+ A +SVGD+V K Sbjct: 232 NVKEGDVLEGTVARLAPFGAFVEIAPGLEGMVHVSELSWSRVQQADEAVSVGDKVRVKVL 291 Query: 507 GV----------DRKNR-AISLSVRAKDEADEKDAIATVNKQEDANFSNNAMA 548 G+ D + ISLS+R +D ++ + +A Sbjct: 292 GIAGAEEGKGGKDSRKGPRISLSIRQVSGDPWQDVADRLDADQILTGKVTRLA 344 >UniRef50_C6BYI5 RNA binding S1 domain protein n=4 Tax=Desulfovibrionales RepID=C6BYI5_DESAD Length = 503 Score = 373 bits (959), Expect = e-102, Method: Composition-based stats. Identities = 152/456 (33%), Positives = 248/456 (54%), Gaps = 11/456 (2%) Query: 2 TESFAQLFE--ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE 59 E+FA+LFE +S + G ++G V++I KD V VD G K + + ++ + +GE Sbjct: 11 EENFAELFEAFQSESNDNLQVGDQIKGTVISITKDSVFVDTGSKVDGVVDRDELTDEEGE 70 Query: 60 LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGG 119 L ++ GD V++ + ++ + +LS+ + L +AYE+ V G + KGG Sbjct: 71 LTVKDGDTVELYVISMNNNE--IVLSKAMSGA-GGLNMLREAYENKVPVEGKVAETCKGG 127 Query: 120 FTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 F V++ + F P S +D V D G F+VIK ++ N+VVSRR ++E E Sbjct: 128 FRVKMMHRKVFCPVSQIDTSFVEDAEAFVGSTHNFQVIKFEENGRNIVVSRRVLLEQEQE 187 Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVG 238 R+ ++++Q ++G V L +GAFV+L GV+G++HI++++W R P ++V G Sbjct: 188 KAREAFMQDVQPDAVMEGKVTKLMPFGAFVELTPGVEGMVHISELSWSRSAKPEDVVQPG 247 Query: 239 DEITVKVLKFDRERT----RVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFV 294 DE++V++L + + ++ L LKQL DPW I ++ G K+TG V D+G FV Sbjct: 248 DEVSVRILSMEPRKDGKGLKIGLSLKQLQADPWDEIGDKFKAGDKVTGTVVRCADFGAFV 307 Query: 295 EIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPW 354 EI G+EGLVHVSEM +T + P V+ G V VMV DID +RRI L +K +PW Sbjct: 308 EIAPGIEGLVHVSEMSYTKRVHKPEDEVSPGQEVAVMVKDIDPVKRRIGLSMKDAAGDPW 367 Query: 355 QQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDE 414 +T G VEG +++ +FGIFI L GI GL+ +S I+ + E K GD+ Sbjct: 368 MDMEDTFKVGQEVEGTVENRAEFGIFINLAPGITGLLPMSRITRSGKQAEL-EALKPGDK 426 Query: 415 IAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKK 450 + + +++ +++L + + +N K Sbjct: 427 VKISIEEINTTDRKVTLTAGEAQKADGDNDWKEYTK 462 Score = 280 bits (717), Expect = 8e-74, Method: Composition-based stats. Identities = 110/448 (24%), Positives = 189/448 (42%), Gaps = 19/448 (4%) Query: 99 EKAYEDAETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRPVRDTLHLEGKELEFKVI 157 + + + G + K V+ + + + +G +E VI Sbjct: 26 NDNLQVGDQIKGTVISITKDSVFVDTGSKVDGVVDRDELTDEEGE-LTVKDGDTVELYVI 84 Query: 158 KLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGL 217 ++ +V +A+ + + EN V+G V G V + Sbjct: 85 SMNNNE---IVLSKAMSGAGGLNMLREAYENKVP---VEGKVAETCKGGFRVKMMHRKVF 138 Query: 218 LHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQL----GEDPWVAIAKR 273 ++ + V+ VG +V+KF+ + + + L E A + Sbjct: 139 CPVSQIDTSFVEDAEAF--VGSTHNFQVIKFEENGRNIVVSRRVLLEQEQEKAREAFMQD 196 Query: 274 YPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVL 333 + G+VT L +G FVE+ GVEG+VH+SE+ W+ ++ P VV GD V V +L Sbjct: 197 VQPDAVMEGKVTKLMPFGAFVELTPGVEGMVHISELSWS-RSAKPEDVVQPGDEVSVRIL 255 Query: 334 DI----DEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDG 389 + D + +I L LKQ +A+PW + + GD+V G + DFG F+ + GI+G Sbjct: 256 SMEPRKDGKGLKIGLSLKQLQADPWDEIGDKFKAGDKVTGTVVRCADFGAFVEIAPGIEG 315 Query: 390 LVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNK 449 LVH+S++S+ + E G E+A +V +D + RI L +K A DP+ + K Sbjct: 316 LVHVSEMSYTKRVHKPEDEVSPGQEVAVMVKDIDPVKRRIGLSMKDAAGDPWMDMEDTFK 375 Query: 450 KGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVD 509 G V G V G + LA G+ G L S +R + L GD+V+ ++ Sbjct: 376 VGQEVEGTVENRAEFGIFINLAPGITGLLPMSRITRSGKQAELEALKPGDKVKISIEEIN 435 Query: 510 RKNRAISLSVRAKDEADEKDAIATVNKQ 537 +R ++L+ +AD + K Sbjct: 436 TTDRKVTLTAGEAQKADGDNDWKEYTKS 463 >UniRef50_A8ZTZ3 RNA binding S1 domain protein n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZTZ3_DESOH Length = 492 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 149/438 (34%), Positives = 238/438 (54%), Gaps = 12/438 (2%) Query: 2 TESFAQLFEESLKEI--ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE 59 TE FA L E + ++ E R G + G ++AI KD V + G KS+ + + + GE Sbjct: 19 TEDFAALLESYMTDMKPEVRVGDKITGEIIAIGKDAVFFNTGTKSDGVVEKAELLDENGE 78 Query: 60 LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGG 119 L +VGD +D+ + V+ GE LS+ L +A+++ V G + KGG Sbjct: 79 LPHKVGDRLDLYV--VDTRDGEIRLSKAMGAG-SGVDMLYEAHQNRIPVEGKVIETCKGG 135 Query: 120 FTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 F +++ G AF P S +DV V G F + +++ + N+VV+RR ++E E + Sbjct: 136 FRIQVMGQTAFCPVSQMDVHYVEKPEEFVGAVFPFLIERIEARGKNLVVNRRRLLEQEQA 195 Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVG 238 +R++ L + G V G V + YGAF++L GV+G++HI++++W RV PSE+ VG Sbjct: 196 EQREKFLAQARPGDIVDGRVVRIMPYGAFMELQPGVEGMVHISELSWSRVGDPSEVTAVG 255 Query: 239 DEITVKVLKFDRERT-----RVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCF 293 + + V++L DR + ++SL KQ DPW + ++Y EG K+ G+VT D+G F Sbjct: 256 EVLPVRILAIDRTGSKTGGLKISLSAKQAAVDPWKTVGEKYKEGDKIEGKVTRCADFGAF 315 Query: 294 VEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP 353 VE+E G+EGLVH+SEM T + + V GD V VMV +D RR+SL +K + +P Sbjct: 316 VEVEPGIEGLVHISEMSHTRRVVKAEDVARPGDRVAVMVTSVDPVNRRLSLSIKAAEGDP 375 Query: 354 WQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGD 413 W A G V G ++ + DFG FI L G+ GL+ S + A +A+ + K D Sbjct: 376 WLTVANRMAVGQTVSGTVERVLDFGCFISLAPGVTGLMPRSSM-ERAADPKAMEKLKADD 434 Query: 414 EIAAVVLQVDAERERISL 431 + + ++ ++ISL Sbjct: 435 PVTVKIETINLADKKISL 452 Score = 271 bits (693), Expect = 5e-71, Method: Composition-based stats. Identities = 112/473 (23%), Positives = 190/473 (40%), Gaps = 22/473 (4%) Query: 92 HEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRPVRDTLHLEGK 150 ++ + +TG I K + + + H G Sbjct: 27 ESYMTDMKPEVRVGDKITGEIIAIGKDAVFFNTGTKSDGVVEKAELLDENGE-LPHKVGD 85 Query: 151 ELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVD 210 L+ V+ + +A+ + +N V+G V G + Sbjct: 86 RLDLYVVDTRDGEIRLS---KAMGAGSGVDMLYEAHQNRIP---VEGKVIETCKGGFRIQ 139 Query: 211 LGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGED----P 266 + G ++ M V+ P E VG + + + + + ++L E Sbjct: 140 VMGQTAFCPVSQMDVHYVEKPEEF--VGAVFPFLIERIEARGKNLVVNRRRLLEQEQAEQ 197 Query: 267 WVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGD 326 + G + GRV + YG F+E++ GVEG+VH+SE+ W+ + PS+V VG+ Sbjct: 198 REKFLAQARPGDIVDGRVVRIMPYGAFMELQPGVEGMVHISELSWS-RVGDPSEVTAVGE 256 Query: 327 VVEVMVLDIDEERRR-----ISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFI 381 V+ V +L ID + ISL KQ +PW+ E + +GD++EGK+ DFG F+ Sbjct: 257 VLPVRILAIDRTGSKTGGLKISLSAKQAAVDPWKTVGEKYKEGDKIEGKVTRCADFGAFV 316 Query: 382 GLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPF 441 ++ GI+GLVH+S++S +A + GD +A +V VD R+SL +K DP+ Sbjct: 317 EVEPGIEGLVHISEMSHTRRVVKAEDVARPGDRVAVMVTSVDPVNRRLSLSIKAAEGDPW 376 Query: 442 NNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEV 501 G V+G V V G + LA GV G + S R A L D V Sbjct: 377 LTVANRMAVGQTVSGTVERVLDFGCFISLAPGVTGLMPRSSMERAADPKAMEKLKADDPV 436 Query: 502 EAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAA 554 K ++ ++ ISL+ + A + + + + +AA Sbjct: 437 TVKIETINLADKKISLAPADAEGASDWK--QYTGNEPRQAGGLGDLGQKLQAA 487 Score = 50.3 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 11/81 (13%), Positives = 26/81 (32%), Gaps = 3/81 (3%) Query: 20 PGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK---NAQGELEIQVGDEVDVALDAVE 76 G V G V + + +P + + + +++ D V V ++ + Sbjct: 385 VGQTVSGTVERVLDFGCFISLAPGVTGLMPRSSMERAADPKAMEKLKADDPVTVKIETIN 444 Query: 77 DGFGETLLSREKAKRHEAWIT 97 + L+ A+ W Sbjct: 445 LADKKISLAPADAEGASDWKQ 465 >UniRef50_B5YEY5 Ribosomal protein S1, putative n=2 Tax=Dictyoglomus RepID=B5YEY5_DICT6 Length = 552 Score = 370 bits (951), Expect = e-101, Method: Composition-based stats. Identities = 141/550 (25%), Positives = 271/550 (49%), Gaps = 11/550 (2%) Query: 12 SLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEI--QVGDEVD 69 ++ ++V G ++ I KD + +D G K ++ +P + Q D + Sbjct: 10 EETDLSISIDTLVYGNILNITKDGLWLDIGKKYDAFLPYNELSKELKAKLEKKQEIDSIP 69 Query: 70 VALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNG-IR 128 V + V G +S +KA ++ W L AYE+ + + G + GF +E+N + Sbjct: 70 VVIKHVNYKDGVITVSNKKAVENKIWEELLWAYENNQPIQGKVINYNGRGFILEINNEVE 129 Query: 129 AFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLEN 188 F+P +DV P++ + + +E K+ +++ ++N +++S R ++E + ER L E Sbjct: 130 GFIPAKEIDVPPIKPPKYYINRRIEGKIKRINPEKNQLIISARELLEQKQEEERSNLWEK 189 Query: 189 LQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLK 247 ++ V+G + + + VDLG G+ G++ +++W +K+ N GD + +VL Sbjct: 190 IKNSQIVRGRIIKVDEDKLTVDLGLGIIGIVEKDEISWFPIKNIRRYYNTGDIVKARVLS 249 Query: 248 FDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVS 307 D L +KQ +PW ++YPEG+ + + ++ G V++ + + G V +S Sbjct: 250 LDENSRTAQLSIKQAQPNPWSLFKEKYPEGSIIKAEIIKIS-GGIVVKV-DNLIGYVPMS 307 Query: 308 EMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRV 367 E+ W + VGD V+ VL +D+ ++I L +KQ + NPW+ + + G+ V Sbjct: 308 EISWGRP-QDVKNSLKVGDKVKAKVLSVDDLNQKIFLSIKQVEPNPWEVIDQNYKIGEIV 366 Query: 368 EGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERE 427 GK+ +ITDFGIFI + G++GL+ ISW +K GD I A ++++D E + Sbjct: 367 SGKVTNITDFGIFIEIKPGLEGLIPRKLISWERIS-NISDIFKPGDFIEAKIIEIDKENK 425 Query: 428 RISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDR 487 +++L + L +DP+ + ++G + G++ G VEL G+EG+L ++ + ++ Sbjct: 426 KLTLSRRDLLKDPWEDIDEKYREGQNIKGRIIEKLKDGYIVELEPGIEGFLPYTQINFEK 485 Query: 488 VEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAM 547 E+ +EVEAK ++ + R I+LS++A + + + + Sbjct: 486 -ENEIQGFKENEEVEAKIVKINPRFRRITLSIKALIKEKLDQEMKKYLSEYAPPPL--TL 542 Query: 548 AEAFKAAKGE 557 E K E Sbjct: 543 GELLKLKNNE 552 >UniRef50_Q2GE01 Ribosomal protein S1 n=2 Tax=Neorickettsia RepID=Q2GE01_NEOSM Length = 553 Score = 370 bits (950), Expect = e-101, Method: Composition-based stats. Identities = 198/549 (36%), Positives = 305/549 (55%), Gaps = 34/549 (6%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE 61 E F + EE + R G +V GV+ +I VLV+ GLKSE IP +QF + Sbjct: 27 EEDFTTILEERFSDSLIREGDMVEGVIKSISPHFVLVNLGLKSEGKIPVQQFHDLG---T 83 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAY--EDAETVTGVINGKVKGG 119 ++VG ++ V ++ E G G +LS KA + + W L + Y E V GVI +K G Sbjct: 84 LEVGSKIIVYVEKTETGSGNLVLSYTKALKQKVWNRLYEMYLNGSDEDVMGVILYTIKSG 143 Query: 120 FTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 VE+ G+ AFLP S +DVRPV D L G +L+F+++K+D K + VSRR + + + Sbjct: 144 CIVEVEGLNAFLPNSHLDVRPVSDPATLVGVKLKFRILKMDPKTGKIFVSRRKALGAVHE 203 Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDL------GGVDGLLHITDMAWKRVKHPSE 233 A R + + ++EG + G VK++ YG FV + G VDGLL++ D++W RV HPS Sbjct: 204 AARSEYISTIKEGDIIDGRVKSIASYGVFVQIHESDKVGVVDGLLYVNDISWARVTHPSS 263 Query: 234 IVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCF 293 I +VG E+ VKV+ D E+ R+SLG+KQL E+PW ++K+Y G G VT++ DYG F Sbjct: 264 IYSVGQEVRVKVIAVDPEKGRISLGVKQLTENPWKDVSKKYTPGNVYPGVVTSVEDYGIF 323 Query: 294 VEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP 353 V +EEGVEGLVH E+ WT + + V VM+L +DEE +I+L +KQC NP Sbjct: 324 VRLEEGVEGLVHSGEISWTREKP----LFLPNSKVNVMLLSVDEEGHKIALSVKQCSDNP 379 Query: 354 WQQFAETHNKGDRVEGKIKSITDFGIFIG-LDGG---IDGLVHLSDISWNVAGEEAVREY 409 W++F + + G V+ K+ ITD GI + LD G + G V L++ISW+ + ++ + Sbjct: 380 WKKFLDAYGLGVVVKCKVVEITDSGIVLTLLDPGYSYVRGYVRLANISWSQNPRKELKRF 439 Query: 410 KKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVE 469 GDE+ A ++ V+ +R R+ +K + DPF +++ + I+ KV V+ G +E Sbjct: 440 TIGDEVEAKLVHVNPDRGRVMFNIKYVEYDPFEEFISRVNEKDIINAKVIRVEDDGIYIE 499 Query: 470 LADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKD 529 + +G+E + S+ SR L+VG + D SV+ + DEK Sbjct: 500 VREGLEFFTAQSDVSR---------LTVGQHLSFVVCSKDHY------SVKLEIITDEKA 544 Query: 530 AIATVNKQE 538 A +++ Sbjct: 545 GGAPAGEEK 553 Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 119/494 (24%), Positives = 220/494 (44%), Gaps = 36/494 (7%) Query: 70 VALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAET-----VTGVINGKVKGGFTVEL 124 + + + LE+ + D+ V GVI V L Sbjct: 6 FYITTNKASERRFYSEVPDYNEEDFTTILEERFSDSLIREGDMVEGVIKSISPHFVLVNL 65 Query: 125 N-GIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERD 183 +P G ++ V K + N+V+S ++ + Sbjct: 66 GLKSEGKIPVQQ----FHDLGTLEVGSKIIVYVEKTETGSGNLVLSYTKALK---QKVWN 118 Query: 184 QLLENLQEG--MEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEI 241 +L E G +V G++ G V++ G++ L + + + V P+ + VG ++ Sbjct: 119 RLYEMYLNGSDEDVMGVILYTIKSGCIVEVEGLNAFLPNSHLDVRPVSDPATL--VGVKL 176 Query: 242 TVKVLKFDRERTRVSLGLKQLG----EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE 297 ++LK D + ++ + ++ E EG + GRV ++ YG FV+I Sbjct: 177 KFRILKMDPKTGKIFVSRRKALGAVHEAARSEYISTIKEGDIIDGRVKSIASYGVFVQIH 236 Query: 298 EG-----VEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN 352 E V+GL++V+++ W + HPS + +VG V V V+ +D E+ RISLG+KQ N Sbjct: 237 ESDKVGVVDGLLYVNDISWA-RVTHPSSIYSVGQEVRVKVIAVDPEKGRISLGVKQLTEN 295 Query: 353 PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKG 412 PW+ ++ + G+ G + S+ D+GIF+ L+ G++GLVH +ISW + Sbjct: 296 PWKDVSKKYTPGNVYPGVVTSVEDYGIFVRLEEGVEGLVHSGEISWTREKP----LFLPN 351 Query: 413 DEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVEL-A 471 ++ ++L VD E +I+L VKQ +++P+ ++ G +V KV + G + L Sbjct: 352 SKVNVMLLSVDEEGHKIALSVKQCSDNPWKKFLDAYGLGVVVKCKVVEITDSGIVLTLLD 411 Query: 472 DG---VEGYLRASEASRDRVEDAT-LVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADE 527 G V GY+R + S + ++GDEVEAK V+ + +++ + Sbjct: 412 PGYSYVRGYVRLANISWSQNPRKELKRFTIGDEVEAKLVHVNPDRGRVMFNIKYVEYDPF 471 Query: 528 KDAIATVNKQEDAN 541 ++ I+ VN+++ N Sbjct: 472 EEFISRVNEKDIIN 485 Score = 80.4 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 42/203 (20%), Positives = 80/203 (39%), Gaps = 17/203 (8%) Query: 353 PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKG 412 + +GD VEG IKSI+ + + L +G + + + + G Sbjct: 35 EERFSDSLIREGDMVEGVIKSISPHFVLVNLGLKSEGKIPVQQF-------HDLGTLEVG 87 Query: 413 DEIAAVVLQVDAERERISLG-VKQLAEDPFNNWVALNKKGAI--VTGKVTAVDAKGATVE 469 +I V + + + L K L + +N + G+ V G + G VE Sbjct: 88 SKIIVYVEKTETGSGNLVLSYTKALKQKVWNRLYEMYLNGSDEDVMGVILYTIKSGCIVE 147 Query: 470 LADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR----AKDEA 525 + +G+ +L S V D + VG +++ + +D K I +S R A EA Sbjct: 148 V-EGLNAFLPNSHLDVRPVSDPATL--VGVKLKFRILKMDPKTGKIFVSRRKALGAVHEA 204 Query: 526 DEKDAIATVNKQEDANFSNNAMA 548 + I+T+ + + + ++A Sbjct: 205 ARSEYISTIKEGDIIDGRVKSIA 227 >UniRef50_D1Y3S9 30S ribosomal protein S1 n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y3S9_9BACT Length = 518 Score = 366 bits (939), Expect = 2e-99, Method: Composition-based stats. Identities = 131/438 (29%), Positives = 246/438 (56%), Gaps = 9/438 (2%) Query: 2 TESFAQLFEES-LKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA---Q 57 + A L + E G ++ G VV LVD G K E +P ++ + Sbjct: 13 SMDMASLMAQYDAASEEIARGKVIEGTVVEKTDGGWLVDVGYKCEGFLPEREWTHHILVD 72 Query: 58 GELEIQVGDEVDVALD-AVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKV 116 + ++GD+++V + + + L+SR + + W LE + + +T KV Sbjct: 73 DKPAPEIGDKIEVQVTSKRDGEEAQLLVSRWRCEFDRRWAELESKVKANDIITVKGIRKV 132 Query: 117 KGGFTVELNGIRAFLPGSLVDVR-PVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIE 175 KGG V + F+P S + + EG+E + +++++D+++ +V+SRR++++ Sbjct: 133 KGGLMVNCFNLEGFIPISHLAEEGRGVNPGRFEGEEFQVRLLEMDKRKRRLVLSRRSLLD 192 Query: 176 SENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIV 235 + SA+R++ + G + G V ++T +G FV++G +DGL+H+++++W+R E Sbjct: 193 EDLSAKREKFYSEVNVGDVLDGTVSSVTTFGLFVNVGPLDGLVHVSEVSWQRSSKSRETY 252 Query: 236 NVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVE 295 GD + VKV+ D+E ++SL ++Q +PW + +R+ + + G VTN+TD+G FVE Sbjct: 253 KKGDAVKVKVIGIDKENNKISLSIRQAQGNPWDTVMERWQKDQQTKGVVTNVTDFGAFVE 312 Query: 296 IEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQ 355 +E G+EGL+H+ ++ W+ + HP +V++ G VE +VL+ID E++R+SLG KQ +PW+ Sbjct: 313 VEPGIEGLIHIGDLSWS-RIKHPREVLHKGQEVETIVLEIDPEKKRMSLGYKQLH-DPWK 370 Query: 356 QFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEI 415 E + KG + K+ + DFG F+ ++ G++GL+H+S +S + + ++G E+ Sbjct: 371 GIEERYTKGQDITVKVVRLADFGAFVEIEKGVEGLIHISQLSTHRVEK-PGDVLQEGQEV 429 Query: 416 AAVVLQVDAERERISLGV 433 A VL+V+ RI L + Sbjct: 430 TARVLEVNPAERRIRLSI 447 Score = 315 bits (807), Expect = 3e-84, Method: Composition-based stats. Identities = 123/462 (26%), Positives = 213/462 (46%), Gaps = 16/462 (3%) Query: 85 SREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRP--V 141 S + A + + + + G + K GG+ V++ FLP Sbjct: 13 SMDMASLMAQYDAASEEIARGKVIEGTVVEKTDGGWLVDVGYKCEGFLPEREWTHHILVD 72 Query: 142 RDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKN 201 G ++E +V ++ R E + +L ++ + Sbjct: 73 DKPAPEIGDKIEVQVTSKRDGEEAQLLVSRWRCEFDRRW--AELESKVKANDIITVKGIR 130 Query: 202 LTDYGAFVDLGGVDGLLHITDMAW-KRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLK 260 G V+ ++G + I+ +A R +P G+E V++L+ D+ + R+ L + Sbjct: 131 KVKGGLMVNCFNLEGFIPISHLAEEGRGVNPGRF--EGEEFQVRLLEMDKRKRRLVLSRR 188 Query: 261 QLGED----PWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNI 316 L ++ G L G V+++T +G FV + ++GLVHVSE+ W ++ Sbjct: 189 SLLDEDLSAKREKFYSEVNVGDVLDGTVSSVTTFGLFVNVGP-LDGLVHVSEVSW-QRSS 246 Query: 317 HPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITD 376 + GD V+V V+ ID+E +ISL ++Q + NPW E K + +G + ++TD Sbjct: 247 KSRETYKKGDAVKVKVIGIDKENNKISLSIRQAQGNPWDTVMERWQKDQQTKGVVTNVTD 306 Query: 377 FGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQL 436 FG F+ ++ GI+GL+H+ D+SW+ + KG E+ +VL++D E++R+SLG KQL Sbjct: 307 FGAFVEVEPGIEGLIHIGDLSWSRI-KHPREVLHKGQEVETIVLEIDPEKKRMSLGYKQL 365 Query: 437 AEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLS 496 + P+ KG +T KV + GA VE+ GVEG + S+ S RVE VL Sbjct: 366 HD-PWKGIEERYTKGQDITVKVVRLADFGAFVEIEKGVEGLIHISQLSTHRVEKPGDVLQ 424 Query: 497 VGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQE 538 G EV A+ V+ R I LS+ A + ++ + + Sbjct: 425 EGQEVTARVLEVNPAERRIRLSISAIEAGEKAAERGKNSPAQ 466 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 93/374 (24%), Positives = 169/374 (45%), Gaps = 13/374 (3%) Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEI 241 D E + G ++G V TD G VD+G +G L + + +GD+I Sbjct: 24 DAASEEIARGKVIEGTVVEKTDGGWLVDVGYKCEGFLPEREWTHHILVDDKPAPEIGDKI 83 Query: 242 TVKVLK-FDRERTRVSLGL-KQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEG 299 V+V D E ++ + + + W + + +T + G V Sbjct: 84 EVQVTSKRDGEEAQLLVSRWRCEFDRRWAELESKVKANDIITVKGIRKVKGGLMVNCF-N 142 Query: 300 VEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN----PWQ 355 +EG + +S + + ++P + G+ +V +L++D+ +RR+ L + + Sbjct: 143 LEGFIPISHLAEEGRGVNPGRF--EGEEFQVRLLEMDKRKRRLVLSRRSLLDEDLSAKRE 200 Query: 356 QFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEI 415 +F N GD ++G + S+T FG+F+ + +DGLVH+S++SW + + YKKGD + Sbjct: 201 KFYSEVNVGDVLDGTVSSVTTFGLFVNVGP-LDGLVHVSEVSWQRSSKS-RETYKKGDAV 258 Query: 416 AAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVE 475 V+ +D E +ISL ++Q +P++ + +K G VT V GA VE+ G+E Sbjct: 259 KVKVIGIDKENNKISLSIRQAQGNPWDTVMERWQKDQQTKGVVTNVTDFGAFVEVEPGIE 318 Query: 476 GYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVN 535 G + + S R++ VL G EVE +D + + +SL + K Sbjct: 319 GLIHIGDLSWSRIKHPREVLHKGQEVETIVLEIDPEKKRMSLGYKQLH-DPWKGIEERYT 377 Query: 536 KQEDANFSNNAMAE 549 K +D +A+ Sbjct: 378 KGQDITVKVVRLAD 391 >UniRef50_B1LBI3 RNA binding S1 domain protein n=5 Tax=Thermotogaceae RepID=B1LBI3_THESQ Length = 543 Score = 364 bits (935), Expect = 4e-99, Method: Composition-based stats. Identities = 154/558 (27%), Positives = 278/558 (49%), Gaps = 30/558 (5%) Query: 4 SFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQ 63 F + E R G IV+GVV+ + D V+VD G KSE +P + + E + Sbjct: 5 EFNDEILSQYEPEEFRRGQIVKGVVIGKEDDGVVVDFGGKSEGFVPVNELIKSL--DEYK 62 Query: 64 VGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVE 123 VG+ + + + + LS + + L K YE+ + V + + KGG+ V Sbjct: 63 VGENLTLQILNLNYEERSI-LSERRPVLRKTLEELRKDYEEKKPVKARVVSQTKGGYNVL 121 Query: 124 LNGIR-AFLPGSLVDVRPVRDTLHLEGKELEFKVIKL--DQKRNNVVVSRRAVIESENSA 180 L G+ AFLPGS +R KE+E ++++ ++ +VVSRRA+ Sbjct: 122 LKGVVSAFLPGSHSLLRRNDPIPE---KEIEVIILEMVQTKRGPRIVVSRRAL----QDK 174 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGD 239 + ++ + G V+G VK +++ G V++ GV G + +++++ P +IV G Sbjct: 175 KIEEFFSEKKVGDIVEGTVKGISNAGVEVEISEGVRGFIPRSELSYDTRISPEDIVKPGQ 234 Query: 240 EITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEG 299 IT K+++ D+E+ V L LK+L DPW + ++YP G + G V ++ +G FV +E G Sbjct: 235 NITAKIIELDKEKKNVILSLKRLMPDPWEKVEEKYPVGKVVNGEVISIHPFGFFVRLEPG 294 Query: 300 VEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAE 359 VEGLV SE+ W N +VV+ GD+V+V V+++D+E R+++L K+ K +PW+ + Sbjct: 295 VEGLVPRSEVFWGNTRKSLEEVVSAGDLVKVEVINVDKENRKLTLSYKKAKGDPWENIED 354 Query: 360 THNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVV 419 +N + V GK+ I G F+ L+ G++G V +S+ISW +E K G+++ + Sbjct: 355 RYNVNNVVTGKVTGIIKQGAFVELEEGVEGFVPVSEISWKRI-DEPGEILKIGEKVKVKI 413 Query: 420 LQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELAD-GVEGYL 478 L++D E +I+L +K+ E+P+ + + +IV+G + + G VE+ + +EG++ Sbjct: 414 LKIDKENRKITLSIKRTQENPWERALKELETDSIVSGTIKKIVNSGVVVEVEEYDLEGFV 473 Query: 479 RASEASRDRVEDATLVLSVGDEVEAKFTGVDRKN---RAISLSVRAKDEADEKDAIATVN 535 + + G + +D + LS + + E+ I Sbjct: 474 PNNHLLSEPET--------GKVLNLVVLRIDPDEVLGGRMILSEKRYE---ERKNIEEYK 522 Query: 536 KQEDANFSNNAMAEAFKA 553 K + S ++ + K Sbjct: 523 KMVEKESSQKSIGDLLKK 540 >UniRef50_B8J034 RNA binding S1 domain protein n=2 Tax=Desulfovibrio RepID=B8J034_DESDA Length = 489 Score = 361 bits (928), Expect = 3e-98, Method: Composition-based stats. Identities = 147/434 (33%), Positives = 229/434 (52%), Gaps = 10/434 (2%) Query: 3 ESFAQLFEESLKEIE-TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE 61 E FA + + G V G V+AI D V VD G+K + + + +A G+ Sbjct: 16 EDFAAMLAAHETSGHRLQAGQKVTGTVIAITGDSVFVDVGIKVDGIMERKDILDADGKET 75 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 G+ V+ + V ++ LE+A + A V G I G KGG+T Sbjct: 76 TAPGEPVEAWVIGVSAQEIRLS----RSMSGSGVAALEEARDAALPVDGRIAGSCKGGYT 131 Query: 122 VELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 VE+ G AF PGS + + D L G+ L+F VI+++ + N+VVSRRA+++ E + Sbjct: 132 VEVLGKTAFCPGSQIGLASAEDAETLTGRTLQFLVIRVENRGRNIVVSRRALLDRERQEQ 191 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDE 240 + LLE L G V+G + +GAF++L V+G++H+++++W RV P E V++GD Sbjct: 192 LEALLEKLGVGDTVEGKISRFAPFGAFMELDTAVEGMIHLSELSWSRVGAPDEAVSLGDT 251 Query: 241 ITVKVLKFDRERT---RVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE 297 + KVL + R++L KQ DPW + +R G + G+V L +G FVEI Sbjct: 252 VRAKVLSISKSDKGQVRIALSRKQAEGDPWQDVTQRLENGAVVQGKVVRLAPFGAFVEIL 311 Query: 298 EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQF 357 G+EGLVH+SE+ WT + P +++ VGD+V V + +I+ + RRISL L+ + +PWQ Sbjct: 312 PGIEGLVHISELSWTKRVNKPEEILQVGDIVAVKIKEINADSRRISLSLRDAEGDPWQDA 371 Query: 358 AETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAA 417 A+ G V+G ++ + +G+FI L GI GL+ I N + KGD + Sbjct: 372 AQQFAPGSIVQGIVEGRSTYGLFITLAPGITGLLPAG-IIKNAKNAGQYSKLDKGDSVTL 430 Query: 418 VVLQVDAERERISL 431 VV +D RISL Sbjct: 431 VVQNLDTAARRISL 444 Score = 278 bits (712), Expect = 4e-73, Method: Composition-based stats. Identities = 109/480 (22%), Positives = 199/480 (41%), Gaps = 23/480 (4%) Query: 87 EKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRPVRDTL 145 + A A T + + VTG + V++ + + + ++T Sbjct: 17 DFAAMLAAHETSGHRLQAGQKVTGTVIAITGDSVFVDVGIKVDGIMERKDILDADGKETT 76 Query: 146 HLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDY 205 G+ +E VI + + + S + RD L V G + Sbjct: 77 AP-GEPVEAWVIGVSAQEIRLSRSMSGSGVAALEEARDAALP-------VDGRIAGSCKG 128 Query: 206 GAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGED 265 G V++ G + + + + G + V++ + + + + L + Sbjct: 129 GYTVEVLGKTAFCPGSQIGLASAEDAETL--TGRTLQFLVIRVENRGRNIVVSRRALLDR 186 Query: 266 PWVA----IAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKV 321 + ++ G + G+++ +G F+E++ VEG++H+SE+ W+ + P + Sbjct: 187 ERQEQLEALLEKLGVGDTVEGKISRFAPFGAFMELDTAVEGMIHLSELSWS-RVGAPDEA 245 Query: 322 VNVGDVVEVMVLDIDEERR---RISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFG 378 V++GD V VL I + + RI+L KQ + +PWQ + G V+GK+ + FG Sbjct: 246 VSLGDTVRAKVLSISKSDKGQVRIALSRKQAEGDPWQDVTQRLENGAVVQGKVVRLAPFG 305 Query: 379 IFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAE 438 F+ + GI+GLVH+S++SW + + GD +A + +++A+ RISL ++ Sbjct: 306 AFVEILPGIEGLVHISELSWTKRVNKPEEILQVGDIVAVKIKEINADSRRISLSLRDAEG 365 Query: 439 DPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVG 498 DP+ + G+IV G V G + LA G+ G L A + L G Sbjct: 366 DPWQDAAQQFAPGSIVQGIVEGRSTYGLFITLAPGITGLLPAGIIKNAKNAGQYSKLDKG 425 Query: 499 DEVEAKFTGVDRKNRAISLSVRAKDE---ADEKDAIATVNKQE-DANFSNNAMAEAFKAA 554 D V +D R ISL+ + AD+K +K AN N +A+A A Sbjct: 426 DSVTLVVQNLDTAARRISLAPEGSEASFSADDKAWKQHASKGSGSANTGMNTLAQALHKA 485 >UniRef50_C0GUF0 RNA binding S1 domain protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GUF0_9DELT Length = 476 Score = 358 bits (920), Expect = 2e-97, Method: Composition-based stats. Identities = 151/437 (34%), Positives = 234/437 (53%), Gaps = 12/437 (2%) Query: 2 TESFAQLFEESLKEI--ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE 59 +SFA++ ES E E PG VRG +++I KD V VD G K++ E +++G Sbjct: 7 EQSFARMLAESEMESGPELEPGDRVRGKIISIGKDHVYVDTGTKTDGVADREDLLDSEGN 66 Query: 60 LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGG 119 L ++ GD V++ + + G H L +A E V G + KGG Sbjct: 67 LALEEGDSVELFVVSRHQGEIRLA---SSFGAHGGVQQLMQAMEQEIPVQGKVKETCKGG 123 Query: 120 FTVELNG-IRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 F V++ G AF P S +D R V D+ L G+ + F V +++ N+VVSRRA+ + E Sbjct: 124 FRVQVMGNHLAFCPMSQMDNRMVEDSQSLVGESMTFLVSRVEANGRNIVVSRRALKDKEQ 183 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNV 237 + + N + G ++G V + YG FV++ G++GL+HI++M+W R P EIV+V Sbjct: 184 AESLHEFSRNYKPGDVLQGTVTRVEPYGVFVEVAPGLEGLVHISEMSWSRSLAPEEIVSV 243 Query: 238 GDEITVKVLKFDRERT---RVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFV 294 GD ++V +L + + R+ L +KQ DPW +I + + G+ + G VT + +G FV Sbjct: 244 GDTVSVHLLGIEEKDKGQVRIGLSMKQAQADPWESITENFEPGSVVEGVVTRVAPFGAFV 303 Query: 295 EIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPW 354 EI G+EGLVHVSEM + + P + V G V V V ID RRISL ++ + +PW Sbjct: 304 EISPGLEGLVHVSEMSYLKRVSKPEEEVQPGQKVRVKVKGIDSLERRISLSMRDAQGDPW 363 Query: 355 QQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDE 414 + + + KG VEGK++ DFG+ + L+ G+ GLV S + + + ++ K GD Sbjct: 364 EGVSTRYEKGTLVEGKMEKQEDFGMLVALEPGVVGLVPRSIL--HQNQDSSLTNKKPGDR 421 Query: 415 IAAVVLQVDAERERISL 431 + V VD RISL Sbjct: 422 VNVAVESVDEANRRISL 438 Score = 266 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 120/463 (25%), Positives = 204/463 (44%), Gaps = 19/463 (4%) Query: 102 YEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQ 161 E + V G I K V+ + + + EG +E V+ Q Sbjct: 25 LEPGDRVRGKIISIGKDHVYVDTGTKTDGVADREDLLDSEGNLALEEGDSVELFVVSRHQ 84 Query: 162 KRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVD-GLLHI 220 R QL++ +++ + V+G VK G V + G + Sbjct: 85 GEI------RLASSFGAHGGVQQLMQAMEQEIPVQGKVKETCKGGFRVQVMGNHLAFCPM 138 Query: 221 TDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGED----PWVAIAKRYPE 276 + M + V+ + VG+ +T V + + + + + L + ++ Y Sbjct: 139 SQMDNRMVEDSQSL--VGESMTFLVSRVEANGRNIVVSRRALKDKEQAESLHEFSRNYKP 196 Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDID 336 G L G VT + YG FVE+ G+EGLVH+SEM W+ +++ P ++V+VGD V V +L I+ Sbjct: 197 GDVLQGTVTRVEPYGVFVEVAPGLEGLVHISEMSWS-RSLAPEEIVSVGDTVSVHLLGIE 255 Query: 337 EERR---RISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHL 393 E+ + RI L +KQ +A+PW+ E G VEG + + FG F+ + G++GLVH+ Sbjct: 256 EKDKGQVRIGLSMKQAQADPWESITENFEPGSVVEGVVTRVAPFGAFVEISPGLEGLVHV 315 Query: 394 SDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAI 453 S++S+ + E + G ++ V +D+ RISL ++ DP+ +KG + Sbjct: 316 SEMSYLKRVSKPEEEVQPGQKVRVKVKGIDSLERRISLSMRDAQGDPWEGVSTRYEKGTL 375 Query: 454 VTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNR 513 V GK+ + G V L GV G + S +++ T GD V VD NR Sbjct: 376 VEGKMEKQEDFGMLVALEPGVVGLVPRSILHQNQDSSLTNK-KPGDRVNVAVESVDEANR 434 Query: 514 AISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAAKG 556 ISL +++E + A + + +A + KG Sbjct: 435 RISLQPADSVQSEEWQSYAPARDNGLGSLGL-ELKKAMEKKKG 476 Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 35/90 (38%), Gaps = 2/90 (2%) Query: 18 TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE--IQVGDEVDVALDAV 75 G++V G + + +LV +P Q + GD V+VA+++V Sbjct: 370 YEKGTLVEGKMEKQEDFGMLVALEPGVVGLVPRSILHQNQDSSLTNKKPGDRVNVAVESV 429 Query: 76 EDGFGETLLSREKAKRHEAWITLEKAYEDA 105 ++ L + + E W + A ++ Sbjct: 430 DEANRRISLQPADSVQSEEWQSYAPARDNG 459 >UniRef50_C7NE91 RNA binding S1 domain protein n=3 Tax=Leptotrichia RepID=C7NE91_LEPBD Length = 600 Score = 358 bits (920), Expect = 2e-97, Method: Composition-based stats. Identities = 161/548 (29%), Positives = 270/548 (49%), Gaps = 27/548 (4%) Query: 4 SFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQ 63 F L E+ L E + + G +V GV+ + D +D K E I A + ++ + Sbjct: 5 EFEVLLEDYLPEEK-KSGDVVEGVITRKELDYGFLDLNAKKEGRIYAHEVQD------FE 57 Query: 64 VGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVE 123 +GD+++V + +D + A ++ + VTG I+ K+KGG+TV+ Sbjct: 58 IGDKIEVKVLREDDDNIIVSKFMLDKAKELA------SFNVDDIVTGEISRKIKGGYTVK 111 Query: 124 LNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERD 183 + AFLP SL +D G++ +F + + ++ + S +E E Sbjct: 112 IGKNEAFLPFSLARFEKDKD---YTGQKFKFLIREKNKSNITISRSDLIKLEEEK----- 163 Query: 184 QLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITV 243 E++ G V G VK + D+G +DLG G +HI++++W++V + +E GDEI+ Sbjct: 164 -YFESVNIGDIVTGKVKEVFDFGIILDLGAASGFIHISEVSWEQVDNLTEKYKKGDEISA 222 Query: 244 KVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGL 303 K+++ D E+ R+ L +KQL EDPW+ A+ + G + V ++ D+G V +G G Sbjct: 223 KIIEKDAEKNRLKLSIKQLSEDPWINFAENHNVGDVVEAVVKDVLDFGI-VATVDGNSGF 281 Query: 304 VHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNK 363 VH+SE+ W + K GD ++ I+ E++ + L +KQ NPW E ++ Sbjct: 282 VHISELAW-HNGAKELKNYKEGDKFSAKIIQIENEKKNVKLSVKQLSENPWNTVKEKYHI 340 Query: 364 GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVD 423 GD +E I + DFG+ I L+ IDGL+H+SD+S+ +YK GD I ++ + Sbjct: 341 GDIIEKPITEVFDFGLLISLEKDIDGLLHVSDLSYKR-ESNLTSKYKAGDLIKFKIVDFN 399 Query: 424 AERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEA 483 E+ RI+L K L +D + TGKV V G VEL G+E ++ +E Sbjct: 400 DEKNRITLSAKALLDDRWEVLEETYDFDNTFTGKVMNVQDYGIFVELEKGIEVFIHRNEF 459 Query: 484 SRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFS 543 S D+ E VGDEVE K VD+ ++ +S S++ +++ K+A K N Sbjct: 460 SWDKREH--KKYKVGDEVEFKVIIVDKLDKKLSGSIKQLEKSPWKEATEQCKKGNVINTE 517 Query: 544 NNAMAEAF 551 + E F Sbjct: 518 IVEIQENF 525 Score = 312 bits (800), Expect = 2e-83, Method: Composition-based stats. Identities = 125/531 (23%), Positives = 255/531 (48%), Gaps = 16/531 (3%) Query: 8 LFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDE 67 + +++ + IV G + K V G K+E+ +P + + + G + Sbjct: 80 MLDKAKELASFNVDDIVTGEISRKIKGGYTVKIG-KNEAFLPFSLARFEKDKDY--TGQK 136 Query: 68 VDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGI 127 + ++ + VTG + G ++L Sbjct: 137 FKFLIREKNKSNITIS---RSDLIKLEEEKYFESVNIGDIVTGKVKEVFDFGIILDLGAA 193 Query: 128 RAFLPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQL 185 F+ S V V + +G E+ K+I+ D ++N + +S + + E Sbjct: 194 SGFIHISEVSWEQVDNLTEKYKKGDEISAKIIEKDAEKNRLKLSIKQLSEDPWINFA--- 250 Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKV 245 EN G V+ +VK++ D+G + G G +HI+++AW + GD+ + K+ Sbjct: 251 -ENHNVGDVVEAVVKDVLDFGIVATVDGNSGFVHISELAWHNGAKELKNYKEGDKFSAKI 309 Query: 246 LKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVH 305 ++ + E+ V L +KQL E+PW + ++Y G + +T + D+G + +E+ ++GL+H Sbjct: 310 IQIENEKKNVKLSVKQLSENPWNTVKEKYHIGDIIEKPITEVFDFGLLISLEKDIDGLLH 369 Query: 306 VSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGD 365 VS++ + + + + GD+++ ++D ++E+ RI+L K + W+ ET++ + Sbjct: 370 VSDLSYKRE-SNLTSKYKAGDLIKFKIVDFNDEKNRITLSAKALLDDRWEVLEETYDFDN 428 Query: 366 RVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAE 425 GK+ ++ D+GIF+ L+ GI+ +H ++ SW+ + ++YK GDE+ V+ VD Sbjct: 429 TFTGKVMNVQDYGIFVELEKGIEVFIHRNEFSWD---KREHKKYKVGDEVEFKVIIVDKL 485 Query: 426 RERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASR 485 +++S +KQL + P+ KKG ++ ++ + V+L D G + E S Sbjct: 486 DKKLSGSIKQLEKSPWKEATEQCKKGNVINTEIVEIQENFVLVKLTDRFNGIVPKRELSE 545 Query: 486 DRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNK 536 + ++D + S+GD+V+A T ++ K ++I+LSV+ E +EK + + K Sbjct: 546 EFLKDISEKFSIGDKVQAVITDINEKRKSIALSVKKVKEQEEKKELDELMK 596 Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 104/290 (35%), Gaps = 25/290 (8%) Query: 260 KQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPS 319 ++ + + G + G +T F+++ EG ++ E+ Sbjct: 4 REFEVLLEDYLPEEKKSGDVVEGVITRKELDYGFLDLNAKKEGRIYAHEVQD-------- 55 Query: 320 KVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGI 379 +GD +EV VL D++ I + + N D V G+I G Sbjct: 56 --FEIGDKIEVKVLREDDDN--IIVSKFMLDKAKEL---ASFNVDDIVTGEISRKIKGGY 108 Query: 380 FIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAED 439 + + + + S ++ ++ G + ++ + + I++ L + Sbjct: 109 TVKIGKN-EAFLPFS-LARFEKDKD-----YTGQKFKFLIREKNKSN--ITISRSDLIKL 159 Query: 440 PFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGD 499 + G IVTGKV V G ++L G++ SE S ++V++ T GD Sbjct: 160 EEEKYFESVNIGDIVTGKVKEVFDFGIILDLGA-ASGFIHISEVSWEQVDNLTEKYKKGD 218 Query: 500 EVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAE 549 E+ AK D + + LS++ E + N + + + Sbjct: 219 EISAKIIEKDAEKNRLKLSIKQLSEDPWINFAENHNVGDVVEAVVKDVLD 268 >UniRef50_Q8KTS5 Ribosomal protein S1 n=1 Tax=Candidatus Tremblaya princeps RepID=Q8KTS5_TREPR Length = 518 Score = 354 bits (909), Expect = 5e-96, Method: Composition-based stats. Identities = 211/431 (48%), Positives = 281/431 (65%), Gaps = 5/431 (1%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE-L 60 +L E K + PGSIV VVAI + V++ AGLKS+S +P +F + QG+ L Sbjct: 1 MHDHIRLLREYCKYYDAGPGSIVAARVVAISSNHVVLRAGLKSDSRVPLGEFVSPQGDRL 60 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 E++VGD ++ G LSR KA+R AW L+ A+ T+ G + G+VKGG Sbjct: 61 EVKVGDVTLAYVERDAYDEGTVRLSRSKARRRVAWGILDSAHRTRGTIMGTVVGRVKGGM 120 Query: 121 TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 T +NG+RAFLPGSL+D RPV+D EG+ L F VIKLD+KR NVV+SRR+VIE + Sbjct: 121 TAVVNGMRAFLPGSLIDTRPVKDAERYEGRRLRFHVIKLDRKRGNVVLSRRSVIERRQAE 180 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 R++LL +L +G V+G++KN+TDYGAF+DLGG+DGLLHITD++W+R++HPS++++VGD Sbjct: 181 NRNRLLASLGDGDVVQGVIKNITDYGAFIDLGGLDGLLHITDISWRRIRHPSQVLSVGDR 240 Query: 241 ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV 300 ITVKVLKFDR +TRVSLGLKQL DPW I RYP G+++ GRVTN+ DYG FVEIE G+ Sbjct: 241 ITVKVLKFDRTKTRVSLGLKQLHPDPWAGIIGRYPAGSRVRGRVTNIADYGLFVEIERGI 300 Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAET 360 EGL+HVSEM +K + VG V V VLD+ + RRRISLG+K NPW F + Sbjct: 301 EGLLHVSEMHQKSKGTISLRHFRVGQYVNVTVLDVSKTRRRISLGMKHGTLNPWLTFYKG 360 Query: 361 HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL 420 K DR+ I+S D GI + L G+ G+V +S +R G + A V+ Sbjct: 361 FRKNDRMGAIIRSPVDVGILVDLPMGVHGVVCMS----KDLRRRLLRALCSGGVVEARVV 416 Query: 421 QVDAERERISL 431 VD R RISL Sbjct: 417 GVDVNRGRISL 427 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 108/389 (27%), Positives = 181/389 (46%), Gaps = 20/389 (5%) Query: 140 PVRDTLHLEGKELEFKV-------IKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEG 192 P+ + + +G LE KV ++ D V R+ A + G Sbjct: 48 PLGEFVSPQGDRLEVKVGDVTLAYVERDAYDEGTVRLSRSKA-RRRVAWGILDSAHRTRG 106 Query: 193 MEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRER 252 + G V G + G+ L + + + VK G + V+K DR+R Sbjct: 107 TIM-GTVVGRVKGGMTAVVNGMRAFLPGSLIDTRPVKDAERY--EGRRLRFHVIKLDRKR 163 Query: 253 TRVSLGLKQLGED----PWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSE 308 V L + + E + +G + G + N+TDYG F+++ G++GL+H+++ Sbjct: 164 GNVVLSRRSVIERRQAENRNRLLASLGDGDVVQGVIKNITDYGAFIDLG-GLDGLLHITD 222 Query: 309 MDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVE 368 + W + HPS+V++VGD + V VL D + R+SLGLKQ +PW + G RV Sbjct: 223 ISW-RRIRHPSQVLSVGDRITVKVLKFDRTKTRVSLGLKQLHPDPWAGIIGRYPAGSRVR 281 Query: 369 GKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERER 428 G++ +I D+G+F+ ++ GI+GL+H+S++ G ++R ++ G + VL V R R Sbjct: 282 GRVTNIADYGLFVEIERGIEGLLHVSEMHQKSKGTISLRHFRVGQYVNVTVLDVSKTRRR 341 Query: 429 ISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRV 488 ISLG+K +P+ + +K + + + G V+L GV G + S+D Sbjct: 342 ISLGMKHGTLNPWLTFYKGFRKNDRMGAIIRSPVDVGILVDLPMGVHGVV---CMSKDLR 398 Query: 489 EDATLVLSVGDEVEAKFTGVDRKNRAISL 517 L G VEA+ GVD ISL Sbjct: 399 RRLLRALCSGGVVEARVVGVDVNRGRISL 427 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 86/359 (23%), Positives = 136/359 (37%), Gaps = 15/359 (4%) Query: 188 NLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVL 246 + G V V ++ + G D + + + + V VGD V Sbjct: 16 DAGPGSIVAARVVAISSNHVVLRAGLKSDSRVPLGEFVSPQGDRLE--VKVGDVTLAYVE 73 Query: 247 KFDRERTRVSLGL-KQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVH 305 + + V L K W + + + G V G + G+ + Sbjct: 74 RDAYDEGTVRLSRSKARRRVAWGILDSAHRTRGTIMGTVVGRVKGGMT-AVVNGMRAFLP 132 Query: 306 VSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNK-- 363 S + T + G + V+ +D +R + L + + Sbjct: 133 GS-LIDTRPVKDAERY--EGRRLRFHVIKLDRKRGNVVLSRRSVIERRQAENRNRLLASL 189 Query: 364 --GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQ 421 GD V+G IK+ITD+G FI L GG+DGL+H++DISW + GD I VL+ Sbjct: 190 GDGDVVQGVIKNITDYGAFIDL-GGLDGLLHITDISWRRI-RHPSQVLSVGDRITVKVLK 247 Query: 422 VDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRAS 481 D + R+SLG+KQL DP+ + G+ V G+VT + G VE+ G+EG L S Sbjct: 248 FDRTKTRVSLGLKQLHPDPWAGIIGRYPAGSRVRGRVTNIADYGLFVEIERGIEGLLHVS 307 Query: 482 EASRDRVEDAT-LVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQED 539 E + + VG V V + R ISL ++ K + Sbjct: 308 EMHQKSKGTISLRHFRVGQYVNVTVLDVSKTRRRISLGMKHGTLNPWLTFYKGFRKNDR 366 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 49/279 (17%), Positives = 95/279 (34%), Gaps = 13/279 (4%) Query: 276 EGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDI 335 G+ + RV ++ + + V + V VGDV V Sbjct: 19 PGSIVAARVVAISSNHVVLRAGLKSDSRVP---LGEFVSPQGDRLEVKVGDVTLAYVERD 75 Query: 336 DEERRRISLGLKQCKAN-PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLS 394 + + L + + W H + G + G+ + G+ + S Sbjct: 76 AYDEGTVRLSRSKARRRVAWGILDSAHRTRGTIMGTVVGRVKGGM-TAVVNGMRAFLPGS 134 Query: 395 DISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKK---- 450 + ++A R +G + V+++D +R + L + + E Sbjct: 135 -LIDTRPVKDAERY--EGRRLRFHVIKLDRKRGNVVLSRRSVIERRQAENRNRLLASLGD 191 Query: 451 GAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDR 510 G +V G + + GA ++L G++G L ++ S R+ + VLSVGD + K DR Sbjct: 192 GDVVQGVIKNITDYGAFIDLG-GLDGLLHITDISWRRIRHPSQVLSVGDRITVKVLKFDR 250 Query: 511 KNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAE 549 +SL ++ I +A+ Sbjct: 251 TKTRVSLGLKQLHPDPWAGIIGRYPAGSRVRGRVTNIAD 289 >UniRef50_B0VFT2 Putative Ribosomal protein S1 n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VFT2_9BACT Length = 503 Score = 354 bits (908), Expect = 6e-96, Method: Composition-based stats. Identities = 139/432 (32%), Positives = 235/432 (54%), Gaps = 12/432 (2%) Query: 1 MTESFAQLFEESLKE-IETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE 59 M E + ++ EES + E + G ++ +V+I + ++++ G K ++ +F +++G Sbjct: 17 MKEEYLRMLEESFQNTAEIKKGDVIEAPIVSIGEQYIILNLGGKFDAYAEIGEFSDSRGV 76 Query: 60 LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGG 119 L +VGD + + V+ +++R K++ ++ +A+E V G I KGG Sbjct: 77 LPYKVGDNLKGYV--VDQNENGYVVARSLTKQYVDKQSILEAFEKKIPVQGKIYTPTKGG 134 Query: 120 FTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 F V++ G RAF P S V + PV D+ GK L+F VI+ + +VVS R + E Sbjct: 135 FNVDILGARAFCPVSQVSLHPVEDSSQFIGKTLDFLVIECSENCRRIVVSHRQLEEMREQ 194 Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGD 239 ++ L L+ G VKG V +T +GAF+DLGG++GL+H+++++W+ + P + + G Sbjct: 195 ERKETALAKLKVGDIVKGKVLRMTTFGAFIDLGGIEGLMHVSEISWQHIVRPQDELKKGQ 254 Query: 240 EITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEG 299 EI VK+L + +++L K L EDP+ K EG + RV L ++G F E++ G Sbjct: 255 EIEVKILDI--KGEKIALSRKVLLEDPFEVAMKELHEGDIINCRVLRLHNFGAFAELKPG 312 Query: 300 VEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAE 359 VEGL+ +SEM HP +V GD V+V +L IDE+ +ISL LK +A+PW + E Sbjct: 313 VEGLIPISEMSRNRNISHPRDIVKEGDWVQVQILRIDEDTHKISLSLKALEADPWDKIDE 372 Query: 360 THNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVV 419 EG ++S T+FG+F+ + GI GL+ S + ++ G+ + +V Sbjct: 373 IIQLETPFEGIVESSTNFGVFVTISEGITGLLPKS-----RVRKN--DTFQTGEPVTLMV 425 Query: 420 LQVDAERERISL 431 +D E RI+L Sbjct: 426 TAIDKENHRITL 437 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 94/420 (22%), Positives = 182/420 (43%), Gaps = 23/420 (5%) Query: 103 EDAETVTGVINGKVKGGFTVELNG-IRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQ 161 + + + I + + L G A+ + G L+ V +DQ Sbjct: 36 KKGDVIEAPIVSIGEQYIILNLGGKFDAYAEIGEFSDSRGV-LPYKVGDNLKGYV--VDQ 92 Query: 162 KRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHIT 221 N VV+R + + + E V+G + T G VD+ G ++ Sbjct: 93 NENGYVVARSLTKQYVDKQSILEAFEKKIP---VQGKIYTPTKGGFNVDILGARAFCPVS 149 Query: 222 DMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDP----WVAIAKRYPEG 277 ++ V+ S+ +G + V++ R+ + +QL E + G Sbjct: 150 QVSLHPVEDSSQF--IGKTLDFLVIECSENCRRIVVSHRQLEEMREQERKETALAKLKVG 207 Query: 278 TKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDE 337 + G+V +T +G F+++ G+EGL+HVSE+ W + P + G +EV +LDI Sbjct: 208 DIVKGKVLRMTTFGAFIDLG-GIEGLMHVSEISWQHIV-RPQDELKKGQEIEVKILDI-- 263 Query: 338 ERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDIS 397 + +I+L K +P++ + ++GD + ++ + +FG F L G++GL+ +S++S Sbjct: 264 KGEKIALSRKVLLEDPFEVAMKELHEGDIINCRVLRLHNFGAFAELKPGVEGLIPISEMS 323 Query: 398 WNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGK 457 N K+GD + +L++D + +ISL +K L DP++ + + G Sbjct: 324 RNRNISHPRDIVKEGDWVQVQILRIDEDTHKISLSLKALEADPWDKIDEIIQLETPFEGI 383 Query: 458 VTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISL 517 V + G V +++G+ G L S ++ G+ V T +D++N I+L Sbjct: 384 VESSTNFGVFVTISEGITGLLPKSRVRKN------DTFQTGEPVTLMVTAIDKENHRITL 437 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 98/382 (25%), Positives = 171/382 (44%), Gaps = 21/382 (5%) Query: 160 DQKRNNVVVSRRAVIESENSAERDQLLENLQE---GMEVKGIVKNLTDYGAFVDLGG-VD 215 D+ +N + ++ E ++ +N E G ++ + ++ + ++LGG D Sbjct: 3 DKVHSNSSKTAMKEMKEEYLRMLEESFQNTAEIKKGDVIEAPIVSIGEQYIILNLGGKFD 62 Query: 216 GLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYP 275 I + + R P VGD + V+ + V+ L + +I + + Sbjct: 63 AYAEIGEFSDSRGVLP---YKVGDNLKGYVVDQNENGYVVARSLTK-QYVDKQSILEAFE 118 Query: 276 EGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDI 335 + + G++ T G V+I G VS++ + S+ +G ++ +V++ Sbjct: 119 KKIPVQGKIYTPTKGGFNVDIL-GARAFCPVSQVSL-HPVEDSSQF--IGKTLDFLVIEC 174 Query: 336 DEERRRISLGLKQCKA----NPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLV 391 E RRI + +Q + + GD V+GK+ +T FG FI L GGI+GL+ Sbjct: 175 SENCRRIVVSHRQLEEMREQERKETALAKLKVGDIVKGKVLRMTTFGAFIDL-GGIEGLM 233 Query: 392 HLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKG 451 H+S+ISW E KKG EI +L + + E+I+L K L EDPF + +G Sbjct: 234 HVSEISWQHIV-RPQDELKKGQEIEVKILDI--KGEKIALSRKVLLEDPFEVAMKELHEG 290 Query: 452 AIVTGKVTAVDAKGATVELADGVEGYLRASEASRDR-VEDATLVLSVGDEVEAKFTGVDR 510 I+ +V + GA EL GVEG + SE SR+R + ++ GD V+ + +D Sbjct: 291 DIINCRVLRLHNFGAFAELKPGVEGLIPISEMSRNRNISHPRDIVKEGDWVQVQILRIDE 350 Query: 511 KNRAISLSVRAKDEADEKDAIA 532 ISLS++A + Sbjct: 351 DTHKISLSLKALEADPWDKIDE 372 Score = 141 bits (355), Expect = 8e-32, Method: Composition-based stats. Identities = 55/278 (19%), Positives = 106/278 (38%), Gaps = 16/278 (5%) Query: 268 VAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDV 327 +G + + ++ + + + + + E + + VGD Sbjct: 29 FQNTAEIKKGDVIEAPIVSIGEQYIILNLGGKFDAYAEIGEFSDSRGVL----PYKVGDN 84 Query: 328 VEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGI 387 ++ V+D +E ++ L + + E K V+GKI + T G + + G Sbjct: 85 LKGYVVDQNENGYVVARSLTKQYVDKQSI-LEAFEKKIPVQGKIYTPTKGGFNVDIL-GA 142 Query: 388 DGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVA- 446 +S +S + + + G + +V++ RI + +QL E Sbjct: 143 RAFCPVSQVSLHPVEDSSQF---IGKTLDFLVIECSENCRRIVVSHRQLEEMREQERKET 199 Query: 447 ---LNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEA 503 K G IV GKV + GA ++L G+EG + SE S + L G E+E Sbjct: 200 ALAKLKVGDIVKGKVLRMTTFGAFIDLG-GIEGLMHVSEISWQHIVRPQDELKKGQEIEV 258 Query: 504 KFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDAN 541 K + K I+LS + E + A+ +++ + N Sbjct: 259 KILDI--KGEKIALSRKVLLEDPFEVAMKELHEGDIIN 294 >UniRef50_D1AGH2 RNA binding S1 domain protein n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AGH2_SEBTE Length = 681 Score = 353 bits (907), Expect = 8e-96, Method: Composition-based stats. Identities = 146/548 (26%), Positives = 267/548 (48%), Gaps = 26/548 (4%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE 61 F L E L E + + G ++ G+++ +KD +D K E I + +N Sbjct: 1 MNEFETLLNEYLPEEK-KKGELIEGIILRKEKDFSYLDVNDKLEGKIYTNEIEN------ 53 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 + VG+ V+V + + ++ A +YE + + G I K+KGG+ Sbjct: 54 LNVGEVVEVKIIRNDGENIIVSKFLLDKEKEFA------SYETGDIIQGEIIEKIKGGYK 107 Query: 122 VELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 V+L FLP S+ ++R + + K+ +F +I D K + S E E Sbjct: 108 VKLGKNIGFLPFSISNLRRDDE---YKNKKFKFLIIDKDTKNLTLSRSDLVKKEEE---- 160 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEI 241 + +Q+G ++G +K + D+G VDLG G +HI+++ W VK + N D+I Sbjct: 161 --DFYQTVQKGDVLEGTIKEILDFGLIVDLGKTTGFIHISEVDWSSVKDLKHLFNANDKI 218 Query: 242 TVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVE 301 K+++ D+E ++ + +KQ+ EDPW +Y G L V+ + +G VE E Sbjct: 219 KAKIIELDKENKKIKMSIKQMKEDPWNIFIAKYKTGDVLEAEVSEVMPFGIVVEHEHN-R 277 Query: 302 GLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETH 361 G +H+SE+ W + SK ++G ++ +++IDE+ R L +KQ NPW + E + Sbjct: 278 GFIHISEISW-HPIEELSKCYSLGQKLKARIIEIDEKGRNYKLSVKQLDENPWDKLVENY 336 Query: 362 NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQ 421 GD VEG I+ I DF I +D + G +H+S+ISW A + ++K GD + A +++ Sbjct: 337 KVGDTVEGVIEKILDFAILPSVDD-VLGFIHISEISWG-AHTGVIEQFKLGDTVKAKIIE 394 Query: 422 VDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRAS 481 ++ + + L +K+L+ DP+ +KG I+ ++ + VE+ + VEG + S Sbjct: 395 LNKDAKIFKLSIKRLSSDPWETVKDKYQKGQILEREIKEILDFALLVEMEENVEGMVHIS 454 Query: 482 EASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDAN 541 E S RV + +VG++++ K + + R +SLS++A + + ++ + Sbjct: 455 EISYRRVNNLKEKFTVGEKIKFKILEFNEEKRRVSLSMKAILDDIWANIHDKYTLNQEVS 514 Query: 542 FSNNAMAE 549 + E Sbjct: 515 GKVINIQE 522 Score = 323 bits (829), Expect = 8e-87, Method: Composition-based stats. Identities = 113/540 (20%), Positives = 248/540 (45%), Gaps = 17/540 (3%) Query: 8 LFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDE 67 L ++ + G I++G ++ K V G K+ +P N + + E + + Sbjct: 78 LLDKEKEFASYETGDIIQGEIIEKIKGGYKVKLG-KNIGFLPFS-ISNLRRDDEYK-NKK 134 Query: 68 VDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGI 127 + ++ LSR + E + + + + G I + G V+L Sbjct: 135 FKFLI--IDKDTKNLTLSRSDLVKKEE-EDFYQTVQKGDVLEGTIKEILDFGLIVDLGKT 191 Query: 128 RAFLPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQL 185 F+ S VD V+D HL +++ K+I+LD++ + + I+ + Sbjct: 192 TGFIHISEVDWSSVKDLKHLFNANDKIKAKIIELDKENKKI----KMSIKQMKEDPWNIF 247 Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKV 245 + + G ++ V + +G V+ G +HI++++W ++ S+ ++G ++ ++ Sbjct: 248 IAKYKTGDVLEAEVSEVMPFGIVVEHEHNRGFIHISEISWHPIEELSKCYSLGQKLKARI 307 Query: 246 LKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVH 305 ++ D + L +KQL E+PW + + Y G + G + + D+ + + V G +H Sbjct: 308 IEIDEKGRNYKLSVKQLDENPWDKLVENYKVGDTVEGVIEKILDFAILPSV-DDVLGFIH 366 Query: 306 VSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGD 365 +SE+ W + +GD V+ +++++++ + L +K+ ++PW+ + + KG Sbjct: 367 ISEISWGAHTG-VIEQFKLGDTVKAKIIELNKDAKIFKLSIKRLSSDPWETVKDKYQKGQ 425 Query: 366 RVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAE 425 +E +IK I DF + + ++ ++G+VH+S+IS+ ++ G++I +L+ + E Sbjct: 426 ILEREIKEILDFALLVEMEENVEGMVHISEISYRRVN-NLKEKFTVGEKIKFKILEFNEE 484 Query: 426 RERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASR 485 + R+SL +K + +D + N V+GKV + G EL DG+E ++ ++ S Sbjct: 485 KRRVSLSMKAILDDIWANIHDKYTLNQEVSGKVINIQEYGIFAELEDGLEVFIHRNDFSW 544 Query: 486 DRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNN 545 ++ E +GD V + +D K + IS ++ ++ K+ + S Sbjct: 545 EKEEH--KEYKLGDIVNFRILKIDEKEKKISGGIKQLTQSPWKEMESMYKIGNKVKVSVE 602 Score = 322 bits (826), Expect = 2e-86, Method: Composition-based stats. Identities = 126/518 (24%), Positives = 250/518 (48%), Gaps = 21/518 (4%) Query: 10 EESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQF---KNAQGELEIQVGD 66 EE + G ++ G + I ++VD G K+ I + + D Sbjct: 158 EEEDFYQTVQKGDVLEGTIKEILDFGLIVDLG-KTTGFIHISEVDWSSVKDLKHLFNAND 216 Query: 67 EVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNG 126 ++ + ++ + +S ++ + + W Y+ + + ++ + G VE Sbjct: 217 KIKAKIIELDKENKKIKMSIKQ-MKEDPWNIFIAKYKTGDVLEAEVSEVMPFGIVVEHEH 275 Query: 127 IRAFLPGSLVDVRPVRDTLH--LEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQ 184 R F+ S + P+ + G++L+ ++I++D+K N +S + + E D+ Sbjct: 276 NRGFIHISEISWHPIEELSKCYSLGQKLKARIIEIDEKGRNYKLSVKQLDE----NPWDK 331 Query: 185 LLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 L+EN + G V+G+++ + D+ + V G +HI++++W E +GD + K Sbjct: 332 LVENYKVGDTVEGVIEKILDFAILPSVDDVLGFIHISEISWGAHTGVIEQFKLGDTVKAK 391 Query: 245 VLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLV 304 +++ +++ L +K+L DPW + +Y +G L + + D+ VE+EE VEG+V Sbjct: 392 IIELNKDAKIFKLSIKRLSSDPWETVKDKYQKGQILEREIKEILDFALLVEMEENVEGMV 451 Query: 305 HVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKG 364 H+SE+ + + + + VG+ ++ +L+ +EE+RR+SL +K + W + + Sbjct: 452 HISEISY-RRVNNLKEKFTVGEKIKFKILEFNEEKRRVSLSMKAILDDIWANIHDKYTLN 510 Query: 365 DRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDA 424 V GK+ +I ++GIF L+ G++ +H +D SW +E +EYK GD + +L++D Sbjct: 511 QEVSGKVINIQEYGIFAELEDGLEVFIHRNDFSWE---KEEHKEYKLGDIVNFRILKIDE 567 Query: 425 ERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEAS 484 + ++IS G+KQL + P+ ++ K G V V G V+L D + E Sbjct: 568 KEKKISGGIKQLTQSPWKEMESMYKIGNKVKVSVENEIENGYIVKLTDRFSALIPKKELP 627 Query: 485 RDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAK 522 + L+VGD VE T + K +++ LSV+ Sbjct: 628 EN------TTLAVGDTVEGIITEMHEKRKSVILSVKKI 659 Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 36/192 (18%), Positives = 79/192 (41%), Gaps = 9/192 (4%) Query: 4 SFAQLFEESLKEIETRP--GSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE-L 60 S + ++ I + V G V+ I + + + E I F + E Sbjct: 491 SMKAILDDIWANIHDKYTLNQEVSGKVINIQEYGIFAELEDGLEVFIHRNDFSWEKEEHK 550 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 E ++GD V+ + +++ + ++ + W +E Y+ V + +++ G+ Sbjct: 551 EYKLGDIVNFRILKIDEKEKKISGGIKQLTQSP-WKEMESMYKIGNKVKVSVENEIENGY 609 Query: 121 TVEL-NGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 V+L + A +P + +T G +E + ++ +KR +V++S + + E E Sbjct: 610 IVKLTDRFSALIPKKELP----ENTTLAVGDTVEGIITEMHEKRKSVILSVKKISEMEEE 665 Query: 180 AERDQLLENLQE 191 E +LLE Sbjct: 666 KELKELLEIYGV 677 >UniRef50_C0QM45 RpsA1 n=2 Tax=Desulfobacteraceae RepID=C0QM45_DESAH Length = 486 Score = 353 bits (906), Expect = 1e-95, Method: Composition-based stats. Identities = 153/460 (33%), Positives = 245/460 (53%), Gaps = 15/460 (3%) Query: 4 SFAQLFEESLKEI--ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE 61 SFA++F EI + R G + G +++I ++ V + G KS+ + + + GE Sbjct: 18 SFAEMFASYDAEINHDIRQGDKIDGKIISIGQNAVYISTGAKSDGVVDKAELLDKNGEFH 77 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 VGDE+ + + ++ + LS+ + A LE+A V G + G +KGGF+ Sbjct: 78 HAVGDEISLYVVSMNESE--ITLSKSLSGAGTA-TMLEEASFTGTPVEGKVAGTIKGGFS 134 Query: 122 VELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 V + G RAF P S +D++ + DT G F + + ++ N+VVSRR ++ EN Sbjct: 135 VTIMGKRAFCPVSQMDIKYIEDTESYVGSTFNFIITRFEEGGRNIVVSRRDLLNLENKDR 194 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 +D + +EG + G V L YGAF++L GV+G+ HI++++W RV E+V G+ Sbjct: 195 QDAFFKEAKEGDILTGSVTKLMPYGAFIELVPGVEGMAHISELSWSRVDKAEEVVKQGET 254 Query: 241 ITVKVLKFDRERT----RVSLGLKQ-LGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVE 295 + VK+LK + + ++SL +KQ L EDPW + A G +LTG+V L +G FVE Sbjct: 255 VKVKLLKIETKEGADMPKISLSIKQALSEDPWDSQAGTIAPGDQLTGKVVRLAPFGAFVE 314 Query: 296 IEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQ 355 I G++GLVH+SEM T + + VV +G++V+V+V DID E+RRISL +K +PW Sbjct: 315 IAPGMDGLVHLSEMSHTRRIVKADDVVTLGEMVQVVVKDIDIEKRRISLSIKDALGDPWA 374 Query: 356 QFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEI 415 AE + G VE ++ FGIF+ L+ G+ GL+ S ++ + K GD++ Sbjct: 375 GIAEKYAPGTIVETTMEKREQFGIFLSLEPGVTGLLPAS-VASKASKPSDYDSLKPGDKV 433 Query: 416 AAVVLQVDAERERISLG---VKQLAEDPFNNWVALNKKGA 452 +V D E+ RISL +K + G Sbjct: 434 TVMVESADEEKRRISLAPPEMKDSDDWRKFAPAQKAPMGD 473 Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats. Identities = 117/470 (24%), Positives = 195/470 (41%), Gaps = 21/470 (4%) Query: 96 ITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRPVRDTLHLEGKELEF 154 + + + G I + + + + + + H G E+ Sbjct: 28 AEINHDIRQGDKIDGKIISIGQNAVYISTGAKSDGVVDKAELLDKNGE-FHHAVGDEISL 86 Query: 155 KVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV 214 V+ +++ + +++ + + ++ G V+G V G V + G Sbjct: 87 YVVSMNESE---ITLSKSLSGAGTATMLEEAS---FTGTPVEGKVAGTIKGGFSVTIMGK 140 Query: 215 DGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLG----EDPWVAI 270 ++ M K ++ VG + +F+ + + + L +D A Sbjct: 141 RAFCPVSQMDIKYIEDTESY--VGSTFNFIITRFEEGGRNIVVSRRDLLNLENKDRQDAF 198 Query: 271 AKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEV 330 K EG LTG VT L YG F+E+ GVEG+ H+SE+ W+ + +VV G+ V+V Sbjct: 199 FKEAKEGDILTGSVTKLMPYGAFIELVPGVEGMAHISELSWS-RVDKAEEVVKQGETVKV 257 Query: 331 MVLDIDEERR----RISLGLKQCK-ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDG 385 +L I+ + +ISL +KQ +PW A T GD++ GK+ + FG F+ + Sbjct: 258 KLLKIETKEGADMPKISLSIKQALSEDPWDSQAGTIAPGDQLTGKVVRLAPFGAFVEIAP 317 Query: 386 GIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWV 445 G+DGLVHLS++S +A G+ + VV +D E+ RISL +K DP+ Sbjct: 318 GMDGLVHLSEMSHTRRIVKADDVVTLGEMVQVVVKDIDIEKRRISLSIKDALGDPWAGIA 377 Query: 446 ALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKF 505 G IV + + G + L GV G L AS AS+ L GD+V Sbjct: 378 EKYAPGTIVETTMEKREQFGIFLSLEPGVTGLLPASVASKASKPSDYDSLKPGDKVTVMV 437 Query: 506 TGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAAK 555 D + R ISL+ ++D+ A K + M EA K K Sbjct: 438 ESADEEKRRISLAPPEMKDSDDWRKFAPAQKAPMGDMGALLM-EALKKKK 486 Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 83/386 (21%), Positives = 166/386 (43%), Gaps = 21/386 (5%) Query: 172 AVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKH 230 A ++ ++ ++++G ++ G + ++ ++ G DG++ ++ K+ Sbjct: 17 ASFAEMFASYDAEINHDIRQGDKIDGKIISIGQNAVYISTGAKSDGVVDKAELLD---KN 73 Query: 231 PSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDY 290 VGDEI++ V+ + ++L G + + GT + G+V Sbjct: 74 GEFHHAVGDEISLYVVSMNESE--ITLSKSLSGAGTATMLEEASFTGTPVEGKVAGTIKG 131 Query: 291 GCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC- 349 G V I G VS+M V G ++ +E R I + + Sbjct: 132 GFSVTIM-GKRAFCPVSQM-DIKYIEDTESYV--GSTFNFIITRFEEGGRNIVVSRRDLL 187 Query: 350 ---KANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAV 406 + F + +GD + G + + +G FI L G++G+ H+S++SW+ ++A Sbjct: 188 NLENKDRQDAFFKEAKEGDILTGSVTKLMPYGAFIELVPGVEGMAHISELSWSRV-DKAE 246 Query: 407 REYKKGDEIAAVVLQVDAERE----RISLGVKQL-AEDPFNNWVALNKKGAIVTGKVTAV 461 K+G+ + +L+++ + +ISL +KQ +EDP+++ G +TGKV + Sbjct: 247 EVVKQGETVKVKLLKIETKEGADMPKISLSIKQALSEDPWDSQAGTIAPGDQLTGKVVRL 306 Query: 462 DAKGATVELADGVEGYLRASEASR-DRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 GA VE+A G++G + SE S R+ A V+++G+ V+ +D + R ISLS++ Sbjct: 307 APFGAFVEIAPGMDGLVHLSEMSHTRRIVKADDVVTLGEMVQVVVKDIDIEKRRISLSIK 366 Query: 521 AKDEADEKDAIATVNKQEDANFSNNA 546 + Sbjct: 367 DALGDPWAGIAEKYAPGTIVETTMEK 392 >UniRef50_C7LJY0 Putative ribosomal protein S1 n=1 Tax=Candidatus Sulcia muelleri SMDSEM RepID=C7LJY0_SULMS Length = 648 Score = 353 bits (906), Expect = 1e-95, Method: Composition-based stats. Identities = 168/532 (31%), Positives = 302/532 (56%), Gaps = 11/532 (2%) Query: 12 SLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVA 71 + I +G ++ + V++D G K+E IP +F+ + ++ D ++V Sbjct: 54 TENLQRIEEFYIYKGKIIQLIDRNVIIDIGFKAEGLIPFNEFREN--KKFPKINDIIEVI 111 Query: 72 LDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFL 131 ++ ++ G+ ++S KAK+ ++W ++ +++ E + + + KGG V L GI FL Sbjct: 112 VEKLD-YKGKLIISYNKAKKLKSWERIQNSWKKNEIIIFFVTARTKGGLIVVLFGIECFL 170 Query: 132 PGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQE 191 PGS ++ +PV+D + G+ +E K++K++ K NVVVS + ++E + + +L+ L++ Sbjct: 171 PGSQIEKKPVKDFDYYVGQTMEGKIVKINNKTKNVVVSHKILLEKDLE--KKKLISQLEK 228 Query: 192 GMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDR 250 G + GIVKNLT YG+F+D+GG +DGL HITD++W+R+ HPSE + VG I +L D+ Sbjct: 229 GQILIGIVKNLTHYGSFIDVGGGIDGLCHITDISWERIDHPSEKLEVGQIINFVILSIDQ 288 Query: 251 ERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMD 310 + RV LGLKQL +PW+ K+ +G L G V+ +TDYG FVE+ GVEGLVHVSEM Sbjct: 289 IKNRVQLGLKQLQTNPWIHFEKKLKKGKVLIGTVSVVTDYGAFVELFPGVEGLVHVSEMS 348 Query: 311 WTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGK 370 W + V +G+ V++++L+++ +++SL +K+ +PW+ + G R G Sbjct: 349 WHQQLKSAKNFVKIGEKVKILILNLEHSAQKMSLSMKRLSPDPWENIENKYPLGTRNIGT 408 Query: 371 IKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERIS 430 +KS T+ G+ + L+ GI+GL++ SDISW + + YKKGD + +VL +D +++ Sbjct: 409 VKSFTNCGVRLELEPGIEGLLYNSDISWTEKIKSGLDIYKKGDLVQLIVLGLDVMTRKLN 468 Query: 431 LGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELAD-GVEGYLRASEASRDRVE 489 G KQL ++P+ N + G+I GK+ +KG V+ + + + ++ Sbjct: 469 FGCKQLTKNPWENLEQIFPIGSIQIGKIIKFFSKGVIVKFNETTICAFAPLGFI----IK 524 Query: 490 DATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDAN 541 + ++L +E E K +++ + +S + K ++ +K E + Sbjct: 525 KSGILLKPYEEAEFKILELEKNYQRFFVSHSSIYVPKIKKEKSSPSKFEVED 576 Score = 211 bits (537), Expect = 7e-53, Method: Composition-based stats. Identities = 85/360 (23%), Positives = 156/360 (43%), Gaps = 14/360 (3%) Query: 194 EVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRER 252 KG + L D +D+G +GL+ + + + + D I V V K D + Sbjct: 65 IYKGKIIQLIDRNVIIDIGFKAEGLIPFNE-----FRENKKFPKINDIIEVIVEKLDYKG 119 Query: 253 TRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWT 312 + K W I + + + VT T G V + G+E + S++ Sbjct: 120 KLIISYNKAKKLKSWERIQNSWKKNEIIIFFVTARTKGGLIVVLF-GIECFLPGSQI-EK 177 Query: 313 NKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN--PWQQFAETHNKGDRVEGK 370 VG +E ++ I+ + + + + K ++ KG + G Sbjct: 178 KPVKDFD--YYVGQTMEGKIVKINNKTKNVVVSHKILLEKDLEKKKLISQLEKGQILIGI 235 Query: 371 IKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERIS 430 +K++T +G FI + GGIDGL H++DISW + + + G I V+L +D + R+ Sbjct: 236 VKNLTHYGSFIDVGGGIDGLCHITDISWERI-DHPSEKLEVGQIINFVILSIDQIKNRVQ 294 Query: 431 LGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEAS-RDRVE 489 LG+KQL +P+ ++ KKG ++ G V+ V GA VEL GVEG + SE S +++ Sbjct: 295 LGLKQLQTNPWIHFEKKLKKGKVLIGTVSVVTDYGAFVELFPGVEGLVHVSEMSWHQQLK 354 Query: 490 DATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAE 549 A + +G++V+ ++ + +SLS++ ++ + + Sbjct: 355 SAKNFVKIGEKVKILILNLEHSAQKMSLSMKRLSPDPWENIENKYPLGTRNIGTVKSFTN 414 Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats. Identities = 58/329 (17%), Positives = 129/329 (39%), Gaps = 25/329 (7%) Query: 242 TVKVLKFDRERTRVSLGLKQLGEDPWVAIA-----KRYPEGTKLTGRVTNLTDYGCFVEI 296 VK+ FD VS K++ + + +R E G++ L D ++I Sbjct: 23 NVKLSDFDWSSYEVSFSKKEIKKRKKLEKLYTENLQRIEEFYIYKGKIIQLIDRNVIIDI 82 Query: 297 EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKA-NPWQ 355 EGL+ +E K + D++EV+V +D + ++ + + K W+ Sbjct: 83 GFKAEGLIPFNEFRENK------KFPKINDIIEVIVEKLDY-KGKLIISYNKAKKLKSWE 135 Query: 356 QFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEI 415 + + K + + + + T G+ + L GI+ + S I + +Y G + Sbjct: 136 RIQNSWKKNEIIIFFVTARTKGGLIVVLF-GIECFLPGSQIEKKPVKD---FDYYVGQTM 191 Query: 416 AAVVLQVDAERERISLGVKQLAED--PFNNWVALNKKGAIVTGKVTAVDAKGATVELADG 473 +++++ + + + + K L E ++ +KG I+ G V + G+ +++ G Sbjct: 192 EGKIVKINNKTKNVVVSHKILLEKDLEKKKLISQLEKGQILIGIVKNLTHYGSFIDVGGG 251 Query: 474 VEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIAT 533 ++G ++ S +R++ + L VG + +D+ + L ++ Sbjct: 252 IDGLCHITDISWERIDHPSEKLEVGQIINFVILSIDQIKNRVQLGLKQLQTNPWIHFEKK 311 Query: 534 VNKQE------DANFSNNAMAEAFKAAKG 556 + K + A E F +G Sbjct: 312 LKKGKVLIGTVSVVTDYGAFVELFPGVEG 340 >UniRef50_A7HME7 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HME7_FERNB Length = 854 Score = 353 bits (905), Expect = 1e-95, Method: Composition-based stats. Identities = 152/556 (27%), Positives = 293/556 (52%), Gaps = 28/556 (5%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL 60 + ESF QL +E + G IV G+V I + +D G K +P E+ + Sbjct: 303 LEESFEQLLKEHENMNQVGRGKIVEGIVTEITPTGLTIDLGGKVTGVVPLEEL--FKELN 360 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 E +VG+++ V ++ + + G +LS +K + ++KA E+ + V+G I ++KGG+ Sbjct: 361 EYKVGEQIKVRVEKINEEDGTAILSAKKPMEKIIFDEIQKAKENGKPVSGKIIERIKGGY 420 Query: 121 TVELNGI-RAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQK--RNNVVVSRRAVIESE 177 V L + AFLPGS ++R + ++++F VI + + + N+VVSR+ + Sbjct: 421 RVILENVVEAFLPGSESNIREDEEIPR---EKMQFAVISYETRGRKTNIVVSRKKLF--- 474 Query: 178 NSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVD-GLLHITDMAWKRVKHPSEIVN 236 D+ N + G V+GIV++++D GAFV + G+ G + +++++ + + Sbjct: 475 -QKLIDEFFSNRKPGDVVEGIVESISDNGAFVKIAGITTGFIPNSEISYNTSIKAKDALT 533 Query: 237 VGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI 296 VG + + + + ER R+ L LK L DPW +AK+Y G +TG VT++ +G FV+I Sbjct: 534 VGKIMKFLIKEINPERKRILLSLKALLPDPWENVAKKYQIGQTVTGVVTSVKPFGFFVKI 593 Query: 297 EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQ 356 E+GVEG V + E+ W K + ++VV++ D V+V +L+I+ E+R++ L K +PW++ Sbjct: 594 EDGVEGFVPIEEVFWGRKG-NINEVVSINDFVKVQILEINPEKRQMKLSYKSVIGDPWEK 652 Query: 357 FAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIA 416 A+ ++GD EGK+ + G+ I ++ + ++S++SWN + K+G+ + Sbjct: 653 IAKKLSEGDISEGKVAKVLPNGVIIEIEPEVTAFCNISEVSWNFV-DNIEDVIKEGESVK 711 Query: 417 AVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEG 476 VL++D E ++I + +++ +P+ + +K+G I+ KV KG + L + +E Sbjct: 712 FQVLKIDPENKKIRVSIRKAKPNPWKAFANAHKEGDIIKVKVIKAVEKG-YIGLCEEIEV 770 Query: 477 YLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNR--AISLSVRAKDEADEKDAIATV 534 Y+ S+ L++GDE++ K ++ + I +S +A + + Sbjct: 771 YIPKSQ--------VYENLNLGDEIDGKIIKLEEQKDIYKIIVSPKAYE--NSLATNKNE 820 Query: 535 NKQEDANFSNNAMAEA 550 +K + +++A Sbjct: 821 SKDFEGVTLEGKISDA 836 >UniRef50_Q1V1Q4 30S ribosomal protein S1 n=3 Tax=Candidatus Pelagibacter RepID=Q1V1Q4_PELUB Length = 576 Score = 352 bits (903), Expect = 2e-95, Method: Composition-based stats. Identities = 176/565 (31%), Positives = 311/565 (55%), Gaps = 11/565 (1%) Query: 2 TESFAQLFEESL-KEIETRPGSIVRGVVVAIDKDVVLVDA-GLKSESAIPAEQFKNAQGE 59 ++ F QL K G I+ GVV + + V ++ GLKSE + + K+ Sbjct: 12 SKEFEQLLNSQFTKTANLEEGKIITGVVNKVTDNFVFLEVPGLKSEPILDINELKSMGML 71 Query: 60 LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGG 119 + +VG+++ V L+ +ED GE L+S KA++ + W L +AYE E + G I G+VKGG Sbjct: 72 DKAKVGEKISVLLERLEDKKGEVLVSASKAQKIQGWDKLVEAYEKNEPIMGKITGRVKGG 131 Query: 120 FTVEL--NGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESE 177 VE G FLPGS + +P++D HL + +F +IKLD+ R N VSRR +I S Sbjct: 132 CIVEHIDTGSLMFLPGSQISDKPLKDISHLMNEPQKFALIKLDKVRGNACVSRREIISSF 191 Query: 178 NSAERDQLLENLQEGMEVKG-IVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIV 235 ++ +++E + G +KG VK + +G F + G +D L+H+ ++++ RV HP E+ Sbjct: 192 KKEDKIKIVEKFKVGDIIKGAEVKGYSSFGCFFSVNGELDVLVHLQEISYSRVNHPDEVF 251 Query: 236 NVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVE 295 +G++ +KV+ D E+ +V +KQL DP+ I+ Y +V L D+G F E Sbjct: 252 TIGEKHDLKVISVDLEKLQVGCSVKQLTPDPFENISN-YELNKIYKVKVVKLMDFGAFCE 310 Query: 296 IEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQ 355 +E+G+ L+H SE+ WT KNI K+ VGD ++ ++ +ID+E+RR+++ + NP++ Sbjct: 311 LEKGLSTLLHSSELSWTKKNISAKKMFKVGDEIDCVITEIDKEKRRVAISHRLTTDNPFE 370 Query: 356 QFAETHNKGDRVEGKIKSITDFGIFIGLDG-GIDGLVHLSDISWNVAGEEAVREYKKGDE 414 F +T+ G VEG++ S ++ IF+ +DG ID +H +D+++ GEE + +YK GD+ Sbjct: 371 TFEKTYPIGSEVEGEVASKNEYSIFLKVDGLDIDAFLHCNDLTYLNNGEEELAKYKIGDK 430 Query: 415 IAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELAD-G 473 + VL+V A +++ +G++Q DPF +W K +T K+ + D KG V Sbjct: 431 LKVKVLEVKAAEQKVRVGLRQTQPDPF-DWFNDKKVKQTITVKIISTDNKGLVVRPEGCE 489 Query: 474 VEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIAT 533 ++ ++ S + + + + G+ ++ +D R +LS++ +E + K A+ T Sbjct: 490 MDFIIKKSAIAINAADARPARFTGGERIDCAIQELDIDKRKATLSIKLLEEIERKVALDT 549 Query: 534 VNKQEDA-NFSNNAMAEAFKAAKGE 557 + N +++++ + K E Sbjct: 550 YGSEASGKNLPFSSLSDDLEKKKKE 574 >UniRef50_Q8RI52 4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=19 Tax=Fusobacterium RepID=ISPH_FUSNN Length = 827 Score = 351 bits (902), Expect = 3e-95, Method: Composition-based stats. Identities = 148/521 (28%), Positives = 269/521 (51%), Gaps = 18/521 (3%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESA-IPAEQFKNAQGEL 60 F+ + EE L E V GV+ ++D++ +D + + + ++ K+ Sbjct: 294 QNEFSLMLEEFLPNQE----KRVEGVIESMDQNFSYLDVPGERTAVRVRTDELKD----- 344 Query: 61 EIQVGDEVDVALDAV---EDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVK 117 +VGD V+V + + +D SR K + + W +E ++++ + + K+K Sbjct: 345 -YKVGDTVEVLITGLSEEDDDQEYITASRRKIEVEKNWEKIEDSFKNKTILDAKVTKKIK 403 Query: 118 GGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESE 177 GG+ VE FLP SL ++ + ++ + ++ K IK+D K ++ Sbjct: 404 GGYLVEAFLYPGFLPNSLSEISDSEEKVNGKKIQVIVKDIKMDPKDKKNR-KITYSVKDI 462 Query: 178 NSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNV 237 AE+++ L G V +V + D+G VD+ + G +HI++++WKR+ S+ V Sbjct: 463 RLAEQEKEFAGLAVGQIVDCVVTEVLDFGLAVDINTLKGFIHISEVSWKRLDKLSDNYKV 522 Query: 238 GDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE 297 GD+I V+ D + V L +K+L EDPW +A + ++ G VT + YG FVEI+ Sbjct: 523 GDKIKAVVVSLDEAKRNVKLSIKKLEEDPWATVANEFKVDDEIEGIVTKVLPYGAFVEIK 582 Query: 298 EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQF 357 GVEGLVH+S+ WT K ++ + V + ++V + D+ E R++ LG+KQ ANPW+ Sbjct: 583 PGVEGLVHISDFSWTKKKVNVADYVKEREKIKVRITDLHPEDRKLKLGIKQLVANPWETA 642 Query: 358 AETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAA 417 + ++GK+ + FGIF+ + GID VH SD +N GEE + ++ G+E+ Sbjct: 643 EKDFAIDTVIKGKVVEVKPFGIFVEIADGIDAFVHSSD--YNWVGEEIPK-FEIGNEVEL 699 Query: 418 VVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGY 477 + ++D ++I +K L + P+ + + K G V K+ V G +EL G++G+ Sbjct: 700 KITELDLNNKKIKGSLKALRKSPWEHAMEEYKVGTTVEKKIKTVADFGLFIELIKGIDGF 759 Query: 478 LRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLS 518 + AS++ +++ S GD V+A+ V+++ + I LS Sbjct: 760 IPTQFASKEFIKNIRDKFSEGDVVKAQVVEVNKETQKIKLS 800 Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 94/419 (22%), Positives = 184/419 (43%), Gaps = 13/419 (3%) Query: 136 VDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEV 195 V VR + G +E + L ++ ++ + + E +++ ++ + + Sbjct: 335 VRVRTDELKDYKVGDTVEVLITGLSEEDDDQEYITASRRKIEVEKNWEKIEDSFKNKTIL 394 Query: 196 KGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKF-----DR 250 V G V+ G L + + E VN G +I V V D+ Sbjct: 395 DAKVTKKIKGGYLVEAFLYPGFLPNS---LSEISDSEEKVN-GKKIQVIVKDIKMDPKDK 450 Query: 251 ERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMD 310 + +++ +K + G + VT + D+G V+I ++G +H+SE+ Sbjct: 451 KNRKITYSVKDIRLAEQEKEFAGLAVGQIVDCVVTEVLDFGLAVDI-NTLKGFIHISEVS 509 Query: 311 WTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGK 370 W + S VGD ++ +V+ +DE +R + L +K+ + +PW A D +EG Sbjct: 510 W-KRLDKLSDNYKVGDKIKAVVVSLDEAKRNVKLSIKKLEEDPWATVANEFKVDDEIEGI 568 Query: 371 IKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERIS 430 + + +G F+ + G++GLVH+SD SW K+ ++I + + E ++ Sbjct: 569 VTKVLPYGAFVEIKPGVEGLVHISDFSWTKKKVNVADYVKEREKIKVRITDLHPEDRKLK 628 Query: 431 LGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVED 490 LG+KQL +P+ ++ GKV V G VE+ADG++ ++ +S+ + V + Sbjct: 629 LGIKQLVANPWETAEKDFAIDTVIKGKVVEVKPFGIFVEIADGIDAFVHSSD--YNWVGE 686 Query: 491 ATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAE 549 +G+EVE K T +D N+ I S++A ++ + A+ +A+ Sbjct: 687 EIPKFEIGNEVELKITELDLNNKKIKGSLKALRKSPWEHAMEEYKVGTTVEKKIKTVAD 745 >UniRef50_A1HTW2 Hydroxymethylbutenyl pyrophosphate reductase n=4 Tax=Veillonellaceae RepID=A1HTW2_9FIRM Length = 655 Score = 350 bits (898), Expect = 9e-95, Method: Composition-based stats. Identities = 149/363 (41%), Positives = 210/363 (57%), Gaps = 6/363 (1%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE-- 59 + F QL ++ +K PG I++G VV + KD V VD G K E IP + E Sbjct: 272 MQEFDQLLDQDMKP--LEPGVILKGRVVGVRKDEVFVDIGHKGEGVIPLTELAYPVPENA 329 Query: 60 -LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 + GDE+DV + A E G LS+ KA AW L+ A + ETVTG + VKG Sbjct: 330 SDVVSEGDEIDVYVLAPEGDDGPVKLSKVKADNIVAWEKLQAAAQANETVTGKVTAVVKG 389 Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 G V L G+R F+P S V V+ V D G+ LE I++DQ + +V+SRR V+E E Sbjct: 390 GLAVSLYGVRGFVPASQVAVQHVADLTPYVGQTLELLPIEIDQAKQKIVLSRRKVLEQEQ 449 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVG 238 ++L L EG V G V + D+G FVDLGGVDGL+HI+D++W RVK+P+E+VN+G Sbjct: 450 QRRAEELFSRLAEGQIVTGTVSRIADFGVFVDLGGVDGLIHISDLSWHRVKNPTEVVNIG 509 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE 298 DE+ V V K D + R+SL LK++ DPW + + EG + G+VT L +G FVE++ Sbjct: 510 DEVQVFVQKVDPKAKRISLSLKRVQRDPWYDVVEGLREGMTVAGKVTKLAKFGAFVEVKP 569 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFA 358 GVEGLVH+SE+ + +VV VG V V +L ID+E +RISL + Q + + + Sbjct: 570 GVEGLVHLSELAD-RRVASAQEVVEVGQTVTVKILGIDKENKRISLSIAQAQQDAERADY 628 Query: 359 ETH 361 + Sbjct: 629 QRF 631 Score = 298 bits (763), Expect = 4e-79, Method: Composition-based stats. Identities = 127/489 (25%), Positives = 219/489 (44%), Gaps = 18/489 (3%) Query: 70 VALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRA 129 V + + E + A ++ A + V EL ++ Sbjct: 170 VDILKTKCREIEVSRTICTATDQRQQAAIKLARKVDVMVVVGGKNSANTSRLAELCRLQG 229 Query: 130 FLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENL 189 P V+ G + + + E + ++D ++ L Sbjct: 230 -CPTYHVETAQELKIDWFTGVQTVGITAGASTPDWIIEEVYSKMQEFDQLLDQD--MKPL 286 Query: 190 QEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKF 248 + G+ +KG V + FVD+G +G++ +T++A+ ++ S++V+ GDEI V VL Sbjct: 287 EPGVILKGRVVGVRKDEVFVDIGHKGEGVIPLTELAYPVPENASDVVSEGDEIDVYVLAP 346 Query: 249 DRERTRVSLG-LKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVS 307 + + V L +K W + +TG+VT + G V + GV G V S Sbjct: 347 EGDDGPVKLSKVKADNIVAWEKLQAAAQANETVTGKVTAVVKGGLAVSLY-GVRGFVPAS 405 Query: 308 EMDWTNKNIHPSKV-VNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQF----AETHN 362 ++ H + + VG +E++ ++ID+ +++I L ++ Q+ Sbjct: 406 QVA----VQHVADLTPYVGQTLELLPIEIDQAKQKIVLSRRKVLEQEQQRRAEELFSRLA 461 Query: 363 KGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQV 422 +G V G + I DFG+F+ L GG+DGL+H+SD+SW+ + GDE+ V +V Sbjct: 462 EGQIVTGTVSRIADFGVFVDL-GGVDGLIHISDLSWHRV-KNPTEVVNIGDEVQVFVQKV 519 Query: 423 DAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASE 482 D + +RISL +K++ DP+ + V ++G V GKVT + GA VE+ GVEG + SE Sbjct: 520 DPKAKRISLSLKRVQRDPWYDVVEGLREGMTVAGKVTKLAKFGAFVEVKPGVEGLVHLSE 579 Query: 483 ASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANF 542 + RV A V+ VG V K G+D++N+ ISLS+ + E+ QE N Sbjct: 580 LADRRVASAQEVVEVGQTVTVKILGIDKENKRISLSIAQAQQDAERADYQRFLSQES-NT 638 Query: 543 SNNAMAEAF 551 + E F Sbjct: 639 LGVTIGEKF 647 Score = 66.1 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 38/105 (36%), Gaps = 4/105 (3%) Query: 18 TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQG---ELEIQVGDEVDVALDA 74 R G V G V + K V+ E + + + + + ++VG V V + Sbjct: 545 LREGMTVAGKVTKLAKFGAFVEVKPGVEGLVHLSELADRRVASAQEVVEVGQTVTVKILG 604 Query: 75 VEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGG 119 ++ LS +A++ ++ GV G+ K G Sbjct: 605 IDKENKRISLSIAQAQQDAERADYQRFLSQESNTLGVTIGE-KFG 648 >UniRef50_B7IE33 4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Thermosipho africanus TCF52B RepID=B7IE33_THEAB Length = 811 Score = 350 bits (897), Expect = 1e-94, Method: Composition-based stats. Identities = 152/556 (27%), Positives = 282/556 (50%), Gaps = 28/556 (5%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL 60 M +F +L + L R G IV VV+ + + VD G KSE + +++ + Sbjct: 270 MENNFEKLLDSYL-FDNVRKGEIVEAVVLRKGESEIFVDFGWKSEGVVTSDEL--VKDVK 326 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 + ++G+++ + L D G LS + + L++ +E E + G +N ++KGG+ Sbjct: 327 DYKIGEKLSLILLRKNDDEGIAYLSEKIVYSKKLKEILKEKFEKGEKIIGKVNSEIKGGY 386 Query: 121 TVELNG-IRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQ--KRNNVVVSRRAVIESE 177 V + I+AFLP S + LEFK+IK ++ KR N+++SR+A I + Sbjct: 387 KVLIENTIQAFLPKSESMIFDGNIPKSP----LEFKIIKFEERGKRLNIILSRKAFINEQ 442 Query: 178 NSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVN 236 +++ +EG ++GIVK + +GAFV + G+DGLL +++++ ++++ Sbjct: 443 ----KEKFFNERKEGDIIEGIVKKIEKFGAFVRIFEGIDGLLPNSEVSYDTSLKVEDVLS 498 Query: 237 VGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI 296 G + + + K D+E ++ L LK+L DPW + K+Y G ++G+V N+ YG +V + Sbjct: 499 EGQSVKLYIKKIDKENRKILLSLKELMPDPWQNVTKKYKVGDIVSGKVKNILSYGFYVNL 558 Query: 297 EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQ 356 E GV+GLVH+ ++ W + S +V+VGD+V+VM+ +ID +++ L K+ + +PW+ Sbjct: 559 EPGVDGLVHIDDIFWGRRG-KISDIVSVGDIVKVMIKEIDPNNKKMRLSYKEVEGDPWEN 617 Query: 357 FAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIA 416 E + G+ + G + I D G+ + ++ GI G +S+ISWN +G ++ Sbjct: 618 IEEKYPVGNTITGTVSFILDKGVIVEIERGISGFCPISEISWNYIS-SVKDVLNEGQKVK 676 Query: 417 AVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEG 476 AV+ ++D E ++ L +K++ E+P+ + +K G IV KV G V + VE Sbjct: 677 AVITELDKENRKMRLSIKRVQENPWKKFKDNHKIGDIVAVKVIKELKSG-YVGACENVEI 735 Query: 477 YLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNR--AISLSVRAKDEADEKDAIATV 534 YL S +++GDE++ K + I+ S + + D++ Sbjct: 736 YLPKS--------HVLKEITLGDELKVKIIQIKEDGEILRITASEKELENEKVIDSLKEE 787 Query: 535 NKQEDANFSNNAMAEA 550 + E + A Sbjct: 788 FENERYTTIERKVDNA 803 Score = 267 bits (683), Expect = 8e-70, Method: Composition-based stats. Identities = 108/465 (23%), Positives = 199/465 (42%), Gaps = 20/465 (4%) Query: 83 LLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRPV 141 +L E L E V V+ K + V+ + V Sbjct: 267 MLQMENNFEKLLDSYLFDNVRKGEIVEAVVLRKGESEIFVDFGWKSEGVV----TSDELV 322 Query: 142 RDTLHL-EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVK 200 +D G++L +++ + +S + V + + E G ++ G V Sbjct: 323 KDVKDYKIGEKLSLILLRKNDDEGIAYLSEKIVYSKKLKEILKEKFEK---GEKIIGKVN 379 Query: 201 NLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTR--VSL 257 + G V + + L ++ + + + + K++KF+ R + L Sbjct: 380 SEIKGGYKVLIENTIQAFLPKSE-SMIFDGNIPK-----SPLEFKIIKFEERGKRLNIIL 433 Query: 258 GLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIH 317 K + EG + G V + +G FV I EG++GL+ SE+ + ++ Sbjct: 434 SRKAFINEQKEKFFNERKEGDIIEGIVKKIEKFGAFVRIFEGIDGLLPNSEVSYD-TSLK 492 Query: 318 PSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDF 377 V++ G V++ + ID+E R+I L LK+ +PWQ + + GD V GK+K+I + Sbjct: 493 VEDVLSEGQSVKLYIKKIDKENRKILLSLKELMPDPWQNVTKKYKVGDIVSGKVKNILSY 552 Query: 378 GIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLA 437 G ++ L+ G+DGLVH+ DI W G+ GD + ++ ++D +++ L K++ Sbjct: 553 GFYVNLEPGVDGLVHIDDIFWGRRGK-ISDIVSVGDIVKVMIKEIDPNNKKMRLSYKEVE 611 Query: 438 EDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSV 497 DP+ N G +TG V+ + KG VE+ G+ G+ SE S + + VL+ Sbjct: 612 GDPWENIEEKYPVGNTITGTVSFILDKGVIVEIERGISGFCPISEISWNYISSVKDVLNE 671 Query: 498 GDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANF 542 G +V+A T +D++NR + LS++ E K + Sbjct: 672 GQKVKAVITELDKENRKMRLSIKRVQENPWKKFKDNHKIGDIVAV 716 >UniRef50_Q2RIU7 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RIU7_MOOTA Length = 736 Score = 347 bits (890), Expect = 7e-94, Method: Composition-based stats. Identities = 144/361 (39%), Positives = 220/361 (60%), Gaps = 5/361 (1%) Query: 6 AQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ---GELEI 62 ++ + + + E R G++V G VV I + V+VD G KSE IP + + + Sbjct: 350 NEMQQITARMPELRRGNVVAGTVVQITDNEVMVDVGGKSEGVIPLNELSHRNVTDPHEVV 409 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 VGD ++V + E+ G +LS+ +A R AW LE+ E + G + VKGG V Sbjct: 410 AVGDTINVMVLRPENEEGHPVLSKRRADRRVAWEKLEEHLASGEEIQGEVIEVVKGGLLV 469 Query: 123 ELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 ++ G+R FLP SLV+ V D G+ L +VI+LD+ +N VV+SR+A++E E +R Sbjct: 470 DV-GVRGFLPASLVERGYVEDLNAYLGQTLRLRVIELDRSKNKVVLSRKAILEEEYEKQR 528 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 +L+ G KGIV+ LT++GAFVDLGGVDGLLH+++++W RV+HP + ++ G EI Sbjct: 529 QATWNSLEVGQVRKGIVRRLTNFGAFVDLGGVDGLLHVSEISWGRVEHPRDALSEGQEIE 588 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 VK+L DRE +VSLG KQL +PW A+RYP GT + G++ L +G FVE+E G+EG Sbjct: 589 VKILGIDREEGKVSLGRKQLLPNPWDTAAERYPVGTIVEGKILRLAPFGAFVEVEPGIEG 648 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHN 362 LVH+S++ P VV++GD++ V VL +D++ +R+SL L+Q ++ A+ Sbjct: 649 LVHISQLAD-RHVDKPEDVVSIGDIIPVKVLGVDQQAQRMSLSLRQAIREKNRKQAKPAE 707 Query: 363 K 363 K Sbjct: 708 K 708 Score = 306 bits (785), Expect = 1e-81, Method: Composition-based stats. Identities = 102/389 (26%), Positives = 182/389 (46%), Gaps = 14/389 (3%) Query: 172 AVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKH 230 + + + L+ G V G V +TD VD+GG +G++ + +++ + V Sbjct: 345 PEEQRNEMQQITARMPELRRGNVVAGTVVQITDNEVMVDVGGKSEGVIPLNELSHRNVTD 404 Query: 231 PSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGED-PWVAIAKRYPEGTKLTGRVTNLTD 289 P E+V VGD I V VL+ + E L ++ W + + G ++ G V + Sbjct: 405 PHEVVAVGDTINVMVLRPENEEGHPVLSKRRADRRVAWEKLEEHLASGEEIQGEVIEVVK 464 Query: 290 YGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC 349 G V++ GV G + S + + + G + + V+++D + ++ L K Sbjct: 465 GGLLVDV--GVRGFLPAS-LVERGYVEDLNAYL--GQTLRLRVIELDRSKNKVVLSRKAI 519 Query: 350 KANPWQQF----AETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEA 405 +++ + G +G ++ +T+FG F+ L GG+DGL+H+S+ISW E Sbjct: 520 LEEEYEKQRQATWNSLEVGQVRKGIVRRLTNFGAFVDL-GGVDGLLHVSEISWGRV-EHP 577 Query: 406 VREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKG 465 +G EI +L +D E ++SLG KQL +P++ G IV GK+ + G Sbjct: 578 RDALSEGQEIEVKILGIDREEGKVSLGRKQLLPNPWDTAAERYPVGTIVEGKILRLAPFG 637 Query: 466 ATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEA 525 A VE+ G+EG + S+ + V+ V+S+GD + K GVD++ + +SLS+R Sbjct: 638 AFVEVEPGIEGLVHISQLADRHVDKPEDVVSIGDIIPVKVLGVDQQAQRMSLSLRQAIRE 697 Query: 526 DEKDAIATVNK-QEDANFSNNAMAEAFKA 553 + K E+ N S + + F Sbjct: 698 KNRKQAKPAEKPAENQNESGVKLGDLFGD 726 Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats. Identities = 105/378 (27%), Positives = 174/378 (46%), Gaps = 16/378 (4%) Query: 80 GETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGI-RAFLPGSLVDV 138 GET E+ + V G + V++ G +P + + Sbjct: 340 GETGTPEEQRNEMQQITARMPELRRGNVVAGTVVQITDNEVMVDVGGKSEGVIPLNELSH 399 Query: 139 RPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVK 196 R V D + G + V++ + + + V+S+R ++L E+L G E++ Sbjct: 400 RNVTDPHEVVAVGDTINVMVLRPENEEGHPVLSKRRAD---RRVAWEKLEEHLASGEEIQ 456 Query: 197 GIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVS 256 G V + G VD+ GV G L + + V+ + + G + ++V++ DR + +V Sbjct: 457 GEVIEVVKGGLLVDV-GVRGFLPASLVERGYVEDLNAYL--GQTLRLRVIELDRSKNKVV 513 Query: 257 LGLKQLG----EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWT 312 L K + E A G G V LT++G FV++ GV+GL+HVSE+ W Sbjct: 514 LSRKAILEEEYEKQRQATWNSLEVGQVRKGIVRRLTNFGAFVDLG-GVDGLLHVSEISWG 572 Query: 313 NKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIK 372 + HP ++ G +EV +L ID E ++SLG KQ NPW AE + G VEGKI Sbjct: 573 -RVEHPRDALSEGQEIEVKILGIDREEGKVSLGRKQLLPNPWDTAAERYPVGTIVEGKIL 631 Query: 373 SITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLG 432 + FG F+ ++ GI+GLVH+S ++ ++ GD I VL VD + +R+SL Sbjct: 632 RLAPFGAFVEVEPGIEGLVHISQLADRHV-DKPEDVVSIGDIIPVKVLGVDQQAQRMSLS 690 Query: 433 VKQLAEDPFNNWVALNKK 450 ++Q + +K Sbjct: 691 LRQAIREKNRKQAKPAEK 708 Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 35/90 (38%), Gaps = 3/90 (3%) Query: 20 PGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ---GELEIQVGDEVDVALDAVE 76 G+IV G ++ + V+ E + Q + E + +GD + V + V+ Sbjct: 622 VGTIVEGKILRLAPFGAFVEVEPGIEGLVHISQLADRHVDKPEDVVSIGDIIPVKVLGVD 681 Query: 77 DGFGETLLSREKAKRHEAWITLEKAYEDAE 106 LS +A R + + A + AE Sbjct: 682 QQAQRMSLSLRQAIREKNRKQAKPAEKPAE 711 >UniRef50_D2L2R4 RNA binding S1 domain protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L2R4_9DELT Length = 507 Score = 344 bits (883), Expect = 5e-93, Method: Composition-based stats. Identities = 145/434 (33%), Positives = 232/434 (53%), Gaps = 10/434 (2%) Query: 4 SFAQLFEESLKEI--ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE 61 FA L E SL E E G + G V+A+ V+VD G K + +F + G L Sbjct: 16 EFAALMEASLAERGGEISVGDRITGPVIAVTDTTVVVDTGTKLDGVADKSEFLDENGALT 75 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 I G+ V + + +V LS+ L A+E V G + KGGF Sbjct: 76 ISEGEAVTLYVVSVRGDE--VALSKA-LTGQGGAEALLAAFEAGVPVEGKVTASRKGGFD 132 Query: 122 VELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 VE+ RAF P S +D+ + G+ F + ++ N+VVSRR + E E + Sbjct: 133 VEILHRRAFCPVSQIDLAFTDNPEVHVGQTYTFLITTFERDGKNIVVSRRKLQEQERAES 192 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 + LE++ G + +V +GAFV++ G++GL+H+++++W R + + V++G Sbjct: 193 ELRFLESVNPGDVIPAVVTRFAAFGAFVEVAPGLEGLVHLSELSWSRAEKAEDAVDLGQA 252 Query: 241 ITVKVLKFDRERT---RVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE 297 +TVKVL FDR++ R+SL +KQ G DPW + +++ G ++ G+VT L D+G FVEI Sbjct: 253 VTVKVLSFDRDKKGRPRISLSIKQAGPDPWDTVGEKFAAGDRVEGKVTRLADFGAFVEIA 312 Query: 298 EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQF 357 G+EGL+HVSEM + PS VV+ G+ V V V D+D +RRISL LK+ +PW Sbjct: 313 PGIEGLIHVSEMSHVRRIAKPSDVVSPGETVTVAVKDVDLSKRRISLSLKEVAGDPWAAV 372 Query: 358 AETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAA 417 ++T G VEG +++ +G+FI L G+ GL+ S + + + GD ++ Sbjct: 373 SDTFAIGSTVEGTVENRQQYGLFINLAPGVTGLLPASKL-RDALEPAPYEKVSSGDTVSV 431 Query: 418 VVLQVDAERERISL 431 VV ++D E+ +++L Sbjct: 432 VVSEIDTEKRKMTL 445 Score = 284 bits (727), Expect = 6e-75, Method: Composition-based stats. Identities = 103/371 (27%), Positives = 168/371 (45%), Gaps = 12/371 (3%) Query: 192 GMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRE 251 G+ V+G V G V++ ++ + +P V+VG T + F+R+ Sbjct: 116 GVPVEGKVTASRKGGFDVEILHRRAFCPVSQIDLAFTDNPE--VHVGQTYTFLITTFERD 173 Query: 252 RTRVSLGLKQLGED----PWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVS 307 + + ++L E + + G + VT +G FVE+ G+EGLVH+S Sbjct: 174 GKNIVVSRRKLQEQERAESELRFLESVNPGDVIPAVVTRFAAFGAFVEVAPGLEGLVHLS 233 Query: 308 EMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERR---RISLGLKQCKANPWQQFAETHNKG 364 E+ W+ + V++G V V VL D +++ RISL +KQ +PW E G Sbjct: 234 ELSWS-RAEKAEDAVDLGQAVTVKVLSFDRDKKGRPRISLSIKQAGPDPWDTVGEKFAAG 292 Query: 365 DRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDA 424 DRVEGK+ + DFG F+ + GI+GL+H+S++S + G+ + V VD Sbjct: 293 DRVEGKVTRLADFGAFVEIAPGIEGLIHVSEMSHVRRIAKPSDVVSPGETVTVAVKDVDL 352 Query: 425 ERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEAS 484 + RISL +K++A DP+ G+ V G V G + LA GV G L AS+ Sbjct: 353 SKRRISLSLKEVAGDPWAAVSDTFAIGSTVEGTVENRQQYGLFINLAPGVTGLLPASKLR 412 Query: 485 RDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSN 544 +S GD V + +D + R ++L+ E++ + D + N Sbjct: 413 DALEPAPYEKVSSGDTVSVVVSEIDTEKRKMTLA--PVGGTKEREFTRDRGEYRDRDRDN 470 Query: 545 NAMAEAFKAAK 555 N + K K Sbjct: 471 NDWKQYAKKEK 481 Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats. Identities = 58/266 (21%), Positives = 105/266 (39%), Gaps = 16/266 (6%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQGE 59 + + E PG ++ VV V+ E + + + E Sbjct: 185 QEQERAESELRFLESVNPGDVIPAVVTRFAAFGAFVEVAPGLEGLVHLSELSWSRAEKAE 244 Query: 60 LEIQVGDEVDVALDAVE---DGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKV 116 + +G V V + + + G LS ++A W T+ + + + V G + Sbjct: 245 DAVDLGQAVTVKVLSFDRDKKGRPRISLSIKQAGPDP-WDTVGEKFAAGDRVEGKVTRLA 303 Query: 117 KGGFTVELN-GIRAFLPGSLVD-VRPVRDTLHLE--GKELEFKVIKLDQKRNNVVVSRRA 172 G VE+ GI + S + VR + + G+ + V +D + + +S + Sbjct: 304 DFGAFVEIAPGIEGLIHVSEMSHVRRIAKPSDVVSPGETVTVAVKDVDLSKRRISLSLKE 363 Query: 173 VIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHP 231 V +A D G V+G V+N YG F++L GV GLL + + P Sbjct: 364 VAGDPWAAVSDTF----AIGSTVEGTVENRQQYGLFINLAPGVTGLLPASKLRDALEPAP 419 Query: 232 SEIVNVGDEITVKVLKFDRERTRVSL 257 E V+ GD ++V V + D E+ +++L Sbjct: 420 YEKVSSGDTVSVVVSEIDTEKRKMTL 445 Score = 48.4 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 14/95 (14%), Positives = 32/95 (33%), Gaps = 3/95 (3%) Query: 15 EIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQGELEIQVGDEVDVA 71 GS V G V + + ++ +PA + ++ ++ GD V V Sbjct: 373 SDTFAIGSTVEGTVENRQQYGLFINLAPGVTGLLPASKLRDALEPAPYEKVSSGDTVSVV 432 Query: 72 LDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAE 106 + ++ + L+ + + Y D + Sbjct: 433 VSEIDTEKRKMTLAPVGGTKEREFTRDRGEYRDRD 467 >UniRef50_O67462 Ribosomal protein S01 n=2 Tax=Aquificaceae RepID=O67462_AQUAE Length = 535 Score = 342 bits (878), Expect = 2e-92, Method: Composition-based stats. Identities = 168/557 (30%), Positives = 270/557 (48%), Gaps = 31/557 (5%) Query: 2 TESFAQLFEESL-KEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL 60 F +L EES+ E + G +V+G VV + D V VD G K+E+ I E+ Sbjct: 1 MNEFEKLLEESIASPEEFKRGQVVKGRVVKVAGDTVFVDIGYKTEAVISKEEVP------ 54 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 E+Q G E++ L +LS + + + L++AY + V G I KVKGGF Sbjct: 55 EVQEGQEIEAVLVRFSPRIPNPVLSVKPLQEKKELEKLKEAYLNKSDVVGKIEKKVKGGF 114 Query: 121 TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKL--DQKRNNVVVSRRAVIESEN 178 V+ G++AFLP S + G+ L FKV+ D KR ++VS +A ++ + Sbjct: 115 IVDFEGVKAFLPMSQAGKKLKE------GQVLTFKVLDFKLDSKRPQIIVSHKAYLDEQR 168 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDY-GAFVDLGGV-DGLLHITDMAWKRVKHPSEIVN 236 + +LL L+ G V+G V + G + + GV L +++W R K+P + Sbjct: 169 EKRKQELLNTLKPGDVVEGKVVKIDPNKGVTLVIEGVLRAFLPKEELSWGRDKNPYNYTD 228 Query: 237 VGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI 296 VG+ + VKV + D+++ + + L++L +PW K + EG + GRV +T G VE+ Sbjct: 229 VGETLKVKVKRVDKQKGFIIVSLRELKGNPWEKFLKEHKEGDVIEGRVVAVTPKGVVVEV 288 Query: 297 EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQ 356 EGVEG V E+ W K GD+V+ ++ ID +RRR+ L +K+ + PW+ Sbjct: 289 MEGVEGFVPEEELAWEGKPE-----FKKGDLVKAKIMKIDPKRRRLILSIKRAQPRPWEI 343 Query: 357 FAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIA 416 F + H G +V+GK+ I + L+ G+ G++H SD+SW + K+G+E Sbjct: 344 FLQKHPVGSKVKGKVIKIEGSRAIVELEDGVKGVIHRSDLSWTR-PKRVEEVLKEGEERE 402 Query: 417 AVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEG 476 VL + E + + LG+KQL E+P+ K G +V V + GA +E +GVEG Sbjct: 403 FAVLGL--EGKYVKLGLKQLTENPWEKVKEKYKVGDVVKLPVKELAPFGAFLEFPEGVEG 460 Query: 477 YLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNK 536 L SE R + + G E E K ++ K I+ S+ A ++ V + Sbjct: 461 LLPFSEVPR------HIRIRKGQEYEVKIIDINPKEGKITFSINALYGEKPEEKEEKVEE 514 Query: 537 QEDANFSNNAMAEAFKA 553 A + E K Sbjct: 515 VTTATTGGFKLGEILKK 531 >UniRef50_A5CF24 30S ribosomal protein S1 n=2 Tax=Orientia tsutsugamushi RepID=A5CF24_ORITB Length = 507 Score = 340 bits (871), Expect = 1e-91, Method: Composition-based stats. Identities = 189/470 (40%), Positives = 284/470 (60%), Gaps = 33/470 (7%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE 61 ++F +LF + + + + G++V+G VV ID +VV+VD LK+E IP +FK A Sbjct: 37 QDNFDELFNK-ITNEQIKAGTVVKGKVVEIDDEVVIVDIKLKNEGRIPLSEFKLASDVPL 95 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 Q+GD VDV ++ +E G T+LSREKA R EAW L++A ++ V GVI GKVKGGFT Sbjct: 96 PQIGDLVDVYVEKIEGRNGCTVLSREKALREEAWSVLDEAQKNGSLVDGVIFGKVKGGFT 155 Query: 122 VELNGIRAFLPGSLVDVR-PVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 V+L+G+ AFLPGS VDVR P+++ L F+++K+D+K N+VVSRRAV+E + Sbjct: 156 VDLSGVVAFLPGSQVDVRRPIKNITPLMNIVQPFQILKMDKKLGNIVVSRRAVLEEARAG 215 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG---------VDGLLHITDMAWKRVKHP 231 R ++L + GM + G+VK++ YGAF++L G VDGLLH ++ W+++ HP Sbjct: 216 IRQEVLSKIHVGMILNGVVKSIVYYGAFIELTGSDELTFDVKVDGLLHSINILWRKINHP 275 Query: 232 SEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYG 291 E + +G ++ V V+ D ++SLG+KQL +PW I G G+V ++ +YG Sbjct: 276 GEELQIGQQVRVVVIGIDISTGQISLGMKQLSANPWDDIENSLQIGDIKVGKVKSIAEYG 335 Query: 292 CFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKA 351 F+E+ + +EGL H + W N +P K + +G V +LDID+ER RISL LK CK Sbjct: 336 AFIEVTKDLEGLCHSGHLGWEKINQNPKKSLTIGQEVVFKILDIDKERHRISLSLKLCKP 395 Query: 352 NPWQQFAETHNKGDRVEGKIKSITDFGIFI-----------GLDGG----------IDGL 390 NPW+ AE + G + +++IT+FG+F+ +DG IDG+ Sbjct: 396 NPWEVLAEKYQVGTVIRAPLRNITNFGMFVALSVTTNAVKYEIDGKEYEIGEMTYQIDGM 455 Query: 391 VHLSD-ISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAED 439 +H SD + +++ Y KGDEI +VL VD E+ERI+LG+KQLA+ Sbjct: 456 IHESDILKHGDTNSNSLKNYTKGDEIECMVLAVDVEKERINLGIKQLADY 505 Score = 237 bits (605), Expect = 7e-61, Method: Composition-based stats. Identities = 104/463 (22%), Positives = 195/463 (42%), Gaps = 44/463 (9%) Query: 99 EKAYEDAETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRPVRDTLHLEGKELEFKVI 157 + + V G + V++ +P S + G ++ V Sbjct: 49 NEQIKAGTVVKGKVVEIDDEVVIVDIKLKNEGRIPLSEFKLASDVPLPQ-IGDLVDVYVE 107 Query: 158 KLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGL 217 K++ + V+SR + E + D+ +N G V G++ G VDL GV Sbjct: 108 KIEGRNGCTVLSREKALREEAWSVLDEAQKN---GSLVDGVIFGKVKGGFTVDLSGVVAF 164 Query: 218 LHITDMAWKR-VKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAK---- 272 L + + +R +K+ + ++N+ ++LK D++ + + + + E+ I + Sbjct: 165 LPGSQVDVRRPIKNITPLMNIVQP--FQILKMDKKLGNIVVSRRAVLEEARAGIRQEVLS 222 Query: 273 RYPEGTKLTGRVTNLTDYGCFVEI--------EEGVEGLVHVSEMDWTNKNIHPSKVVNV 324 + G L G V ++ YG F+E+ + V+GL+H + W K HP + + + Sbjct: 223 KIHVGMILNGVVKSIVYYGAFIELTGSDELTFDVKVDGLLHSINILW-RKINHPGEELQI 281 Query: 325 GDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLD 384 G V V+V+ ID +ISLG+KQ ANPW + GD GK+KSI ++G FI + Sbjct: 282 GQQVRVVVIGIDISTGQISLGMKQLSANPWDDIENSLQIGDIKVGKVKSIAEYGAFIEVT 341 Query: 385 GGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNW 444 ++GL H + W + + G E+ +L +D ER RISL +K +P+ Sbjct: 342 KDLEGLCHSGHLGWEKINQNPKKSLTIGQEVVFKILDIDKERHRISLSLKLCKPNPWEVL 401 Query: 445 VALNKKGAIVTGKVTAVDAKGATV---------------------ELADGVEGYLRASEA 483 + G ++ + + G V E+ ++G + S+ Sbjct: 402 AEKYQVGTVIRAPLRNITNFGMFVALSVTTNAVKYEIDGKEYEIGEMTYQIDGMIHESDI 461 Query: 484 SRDRVEDATLV--LSVGDEVEAKFTGVDRKNRAISLSVRAKDE 524 + ++ + + GDE+E VD + I+L ++ + Sbjct: 462 LKHGDTNSNSLKNYTKGDEIECMVLAVDVEKERINLGIKQLAD 504 Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats. Identities = 81/366 (22%), Positives = 154/366 (42%), Gaps = 22/366 (6%) Query: 187 ENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKV 245 E ++ G VKG V + D VD+ +G + +++ +GD + V V Sbjct: 50 EQIKAGTVVKGKVVEIDDEVVIVDIKLKNEGRIPLSEFKLASDVPLP---QIGDLVDVYV 106 Query: 246 LKFDRERTRVSLGL-KQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLV 304 K + L K L E+ W + + G+ + G + G V++ GV + Sbjct: 107 EKIEGRNGCTVLSREKALREEAWSVLDEAQKNGSLVDGVIFGKVKGGFTVDLS-GVVAFL 165 Query: 305 HVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAET---- 360 S++D + + ++N+ +L +D++ I + + + Sbjct: 166 PGSQVDVRRPIKNITPLMNIVQ--PFQILKMDKKLGNIVVSRRAVLEEARAGIRQEVLSK 223 Query: 361 HNKGDRVEGKIKSITDFGIFIGLDG--------GIDGLVHLSDISWNVAGEEAVREYKKG 412 + G + G +KSI +G FI L G +DGL+H +I W E + G Sbjct: 224 IHVGMILNGVVKSIVYYGAFIELTGSDELTFDVKVDGLLHSINILW-RKINHPGEELQIG 282 Query: 413 DEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELAD 472 ++ VV+ +D +ISLG+KQL+ +P+++ + G I GKV ++ GA +E+ Sbjct: 283 QQVRVVVIGIDISTGQISLGMKQLSANPWDDIENSLQIGDIKVGKVKSIAEYGAFIEVTK 342 Query: 473 GVEGYLRASEASRDRVE-DATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAI 531 +EG + +++ + L++G EV K +D++ ISLS++ + Sbjct: 343 DLEGLCHSGHLGWEKINQNPKKSLTIGQEVVFKILDIDKERHRISLSLKLCKPNPWEVLA 402 Query: 532 ATVNKQ 537 Sbjct: 403 EKYQVG 408 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 55/291 (18%), Positives = 104/291 (35%), Gaps = 20/291 (6%) Query: 272 KRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVM 331 ++ GT + G+V + D V+I+ EG + +SE + P +GD+V+V Sbjct: 50 EQIKAGTVVKGKVVEIDDEVVIVDIKLKNEGRIPLSEFKLASDVPLP----QIGDLVDVY 105 Query: 332 VLDIDEERRRISLGLKQC-KANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGL 390 V I+ L ++ + W E G V+G I G + L G+ Sbjct: 106 VEKIEGRNGCTVLSREKALREEAWSVLDEAQKNGSLVDGVIFGKVKGGFTVDLS-GVVAF 164 Query: 391 VHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALN-- 448 + S + + +L++D + I + + + E+ Sbjct: 165 LPGSQVDVRRPIKNITPLMNIVQP--FQILKMDKKLGNIVVSRRAVLEEARAGIRQEVLS 222 Query: 449 --KKGAIVTGKVTAVDAKGATVELAD--------GVEGYLRASEASRDRVEDATLVLSVG 498 G I+ G V ++ GA +EL V+G L + ++ L +G Sbjct: 223 KIHVGMILNGVVKSIVYYGAFIELTGSDELTFDVKVDGLLHSINILWRKINHPGEELQIG 282 Query: 499 DEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAE 549 +V G+D ISL ++ D ++ + ++AE Sbjct: 283 QQVRVVVIGIDISTGQISLGMKQLSANPWDDIENSLQIGDIKVGKVKSIAE 333 >UniRef50_B1I3Y7 Hydroxymethylbutenyl pyrophosphate reductase n=3 Tax=Clostridiales RepID=B1I3Y7_DESAP Length = 677 Score = 339 bits (870), Expect = 2e-91, Method: Composition-based stats. Identities = 150/362 (41%), Positives = 222/362 (61%), Gaps = 7/362 (1%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ---GELEIQVGDE 67 ++ R G IVRGV+V + +D VLVD G KSE +P + + +QVGDE Sbjct: 311 QTTPVRSLRSGDIVRGVIVQVGQDEVLVDVGAKSEGVVPLRELSCYDVSSPDEVVQVGDE 370 Query: 68 VDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGI 127 +DV + ED G +LS+ +A +AW TL+KA+ ETV GV+ VKGG V+L G+ Sbjct: 371 IDVWVVKAEDNEGRIILSKGRADAVKAWDTLDKAFHGGETVRGVVREVVKGGLLVDL-GV 429 Query: 128 RAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLE 187 R+FLP S V+ V D G+E+ ++I+L++ R V++SR+ ++E E S +R + LE Sbjct: 430 RSFLPASQVERGYVEDLSQYVGREISARIIELNKARKKVILSRKVLLEEEYSRKRKETLE 489 Query: 188 NLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLK 247 QEG VKG+V+ LT +GAFVD+GG+DGLLHI++++W R+ HPSE++ VGDE+ V+VL+ Sbjct: 490 TTQEGDVVKGVVRRLTQFGAFVDIGGLDGLLHISEISWHRINHPSEVLKVGDELEVQVLR 549 Query: 248 FDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVS 307 DRE +VSL LKQ+ +PW + + YP G+ ++ RV L +G FVE+E GVEGLVH+S Sbjct: 550 IDRENEKVSLSLKQVLPNPWEQVVENYPVGSVVSARVVRLVPFGAFVELEPGVEGLVHIS 609 Query: 308 EMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNK--GD 365 + P V+ G + V VL +D+E +RI L L++ + + GD Sbjct: 610 HLAD-WHVAKPEDVIAEGQQINVKVLSVDDENKRIRLSLREVVKDKDYHNDQGSEVTIGD 668 Query: 366 RV 367 Sbjct: 669 VF 670 Score = 278 bits (711), Expect = 4e-73, Method: Composition-based stats. Identities = 97/374 (25%), Positives = 178/374 (47%), Gaps = 18/374 (4%) Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 + +L+ G V+G++ + VD+G +G++ + +++ V P E+V VGDEI V Sbjct: 315 VRSLRSGDIVRGVIVQVGQDEVLVDVGAKSEGVVPLRELSCYDVSSPDEVVQVGDEIDVW 374 Query: 245 VLKFDRERTRVSLGL-KQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGL 303 V+K + R+ L + W + K + G + G V + G V++ GV Sbjct: 375 VVKAEDNEGRIILSKGRADAVKAWDTLDKAFHGGETVRGVVREVVKGGLLVDL--GVRSF 432 Query: 304 VHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETH-- 361 + S++ S+ V G + ++++++ R+++ L K + + + Sbjct: 433 LPASQV-ERGYVEDLSQYV--GREISARIIELNKARKKVILSRKVLLEEEYSRKRKETLE 489 Query: 362 --NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVV 419 +GD V+G ++ +T FG F+ + GG+DGL+H+S+ISW+ K GDE+ V Sbjct: 490 TTQEGDVVKGVVRRLTQFGAFVDI-GGLDGLLHISEISWHRIN-HPSEVLKVGDELEVQV 547 Query: 420 LQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLR 479 L++D E E++SL +KQ+ +P+ V G++V+ +V + GA VEL GVEG + Sbjct: 548 LRIDRENEKVSLSLKQVLPNPWEQVVENYPVGSVVSARVVRLVPFGAFVELEPGVEGLVH 607 Query: 480 ASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQED 539 S + V V++ G ++ K VD +N+ I LS+R + N Q Sbjct: 608 ISHLADWHVAKPEDVIAEGQQINVKVLSVDDENKRIRLSLREVVKDK-----DYHNDQGS 662 Query: 540 ANFSNNAMAEAFKA 553 + + Sbjct: 663 EVTIGDVFGDLLHK 676 Score = 63.4 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 38/105 (36%), Gaps = 3/105 (2%) Query: 15 EIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQGELEIQVGDEVDVA 71 GS+V VV + V+ E + + A+ E I G +++V Sbjct: 573 VENYPVGSVVSARVVRLVPFGAFVELEPGVEGLVHISHLADWHVAKPEDVIAEGQQINVK 632 Query: 72 LDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKV 116 + +V+D LS + + + + + + V G + K Sbjct: 633 VLSVDDENKRIRLSLREVVKDKDYHNDQGSEVTIGDVFGDLLHKN 677 >UniRef50_P46836 30S ribosomal protein S1 n=166 Tax=Actinobacteria (class) RepID=RS1_MYCLE Length = 481 Score = 335 bits (859), Expect = 3e-90, Method: Composition-based stats. Identities = 161/361 (44%), Positives = 229/361 (63%), Gaps = 7/361 (1%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK---NAQG 58 +E F ++++K G IV G +V +D+D VL+D G K+E IPA + + Sbjct: 19 SEDFLAAIDKTIKYFN--DGDIVEGTIVKVDRDEVLLDIGYKTEGVIPARELSIKHDVDP 76 Query: 59 ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 + VGDEV+ + ED G +LS+++A+ AW T+E E E V G++ VKG Sbjct: 77 NEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALKEKDEAVKGIVIEVVKG 136 Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 G +++ G+R FLP SLV++R VRD GKE+E K+I+LD+ RNNVV+SRRA +E Sbjct: 137 GLILDI-GLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNRNNVVLSRRAWLEQTQ 195 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVG 238 S R + L LQ+G KG+V ++ ++GAFVDLGGVDGL+H+++++WK + HPSE+V VG Sbjct: 196 SEVRSEFLNQLQKGAIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWKHIDHPSEVVQVG 255 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE 298 +E+TV+VL D +R RVSL LK EDPW A+ + G + G+VT L +G FV +EE Sbjct: 256 NEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGKVTKLVPFGAFVRVEE 315 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFA 358 G+EGLVH+SE+ P +VV VGD V V+DID ERRRISL LKQ + ++F Sbjct: 316 GIEGLVHISELA-ERHVEVPDQVVAVGDDAMVKVIDIDLERRRISLSLKQANEDYIEEFD 374 Query: 359 E 359 Sbjct: 375 P 375 Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats. Identities = 105/384 (27%), Positives = 182/384 (47%), Gaps = 15/384 (3%) Query: 176 SENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEI 234 + A D+ ++ +G V+G + + +D+G +G++ +++ K P+E+ Sbjct: 20 EDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTEGVIPARELSIKHDVDPNEV 79 Query: 235 VNVGDEITVKVLKFDRERTRVSLGLKQLG-EDPWVAIAKRYPEGTKLTGRVTNLTDYGCF 293 V+VGDE+ VL + + R+ L K+ E W I + + G V + G Sbjct: 80 VSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALKEKDEAVKGIVIEVVKGGLI 139 Query: 294 VEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP 353 ++I G+ G + S + + +G +E ++++D+ R + L + Sbjct: 140 LDI--GLRGFLPAS-LVEMRRVRDLQPY--IGKEIEAKIIELDKNRNNVVLSRRAWLEQT 194 Query: 354 WQQ----FAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREY 409 + F KG +G + SI +FG F+ L GG+DGLVH+S++SW + Sbjct: 195 QSEVRSEFLNQLQKGAIRKGVVSSIVNFGAFVDL-GGVDGLVHVSELSWKHI-DHPSEVV 252 Query: 410 KKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVE 469 + G+E+ VL VD +RER+SL +K EDP+ ++ + G IV GKVT + GA V Sbjct: 253 QVGNEVTVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGKVTKLVPFGAFVR 312 Query: 470 LADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEA--DE 527 + +G+EG + SE + VE V++VGD+ K +D + R ISLS++ +E +E Sbjct: 313 VEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISLSLKQANEDYIEE 372 Query: 528 KDAIATVNKQEDANFSNNAMAEAF 551 D N E F Sbjct: 373 FDPAKYGMADSYDEQGNYIFPEGF 396 Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 39/181 (21%), Positives = 69/181 (38%), Gaps = 8/181 (4%) Query: 12 SLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE---LEIQVGDEV 68 S + + G+I +GVV +I VD G + + + + +QVG+EV Sbjct: 200 SEFLNQLQKGAIRKGVVSSIVNFGAFVDLGG-VDGLVHVSELSWKHIDHPSEVVQVGNEV 258 Query: 69 DVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GI 127 V + V+ LS + A + + W + + + V G + V G V + GI Sbjct: 259 TVEVLDVDMDRERVSLSLK-ATQEDPWRHFARTHAIGQIVPGKVTKLVPFGAFVRVEEGI 317 Query: 128 RAFLPGSLVDVRPVRDTLHLE--GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQL 185 + S + R V + G + KVI +D +R + +S + E Sbjct: 318 EGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISLSLKQANEDYIEEFDPAK 377 Query: 186 L 186 Sbjct: 378 Y 378 >UniRef50_A1QYS7 SSU ribosomal protein S1P n=23 Tax=Borrelia RepID=A1QYS7_BORT9 Length = 555 Score = 335 bits (859), Expect = 3e-90, Method: Composition-based stats. Identities = 162/558 (29%), Positives = 289/558 (51%), Gaps = 15/558 (2%) Query: 2 TESFAQLFEESLKEIE-TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL 60 E+ L E LK +E GS V GVV+ + KD VLVD G KSE I ++F E Sbjct: 3 MENQEDLQENYLKVLEKVELGSSVSGVVINVMKDYVLVDIGYKSEGFIKIDEF-----ET 57 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 +GD++D + V G +LS K +++ + + + G I ++ G+ Sbjct: 58 IPSIGDKLDAIVTKVGGELG-LVLSVAKLDSLNLQDKIDEYISNRKVLKGKILAELSSGY 116 Query: 121 TVELN-GIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQ-KRNNVVVSRRAVIESEN 178 V++N + F+P L RD G +EF V++ D+ +++ RR + Sbjct: 117 KVQINENVIGFMPSYLSS--KFRDEKLKRGLVVEFYVVQADKTDGLRLILDRRTLERERE 174 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVD-GLLHITDMAWKRVKHPSEIVNV 237 ++ +L+ + EG V G+V+ +TDY A + + + G+LH ++A+ RV++ + + V Sbjct: 175 LVKKKELVSSYNEGDIVDGVVERITDYSAIIKVKNLVLGVLHKRNIAFNRVENIEDFIRV 234 Query: 238 GDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE 297 GD++ +K++K + ++ L LK L +PW ++ +Y + + G+V + +G VE++ Sbjct: 235 GDKLRLKIIKLNVNAVKMELSLKALKTNPWDSVEAKYKVESIVKGKVVKILPFGAVVELD 294 Query: 298 EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQF 357 + G +H+S W P ++V VG +VEV +L+ID+E ++ISLG+KQ NPW Sbjct: 295 SEISGFIHISNFSWVRVIKSPQELVKVGQIVEVKILEIDKENQKISLGIKQVNENPWNNL 354 Query: 358 AETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAA 417 A+ G V+G +K+IT G F+ ++ GID + DISW + +K G I+ Sbjct: 355 AQRCAVGKVVQGVVKNITKTGAFVSIEEGIDAYISKFDISW-IDEVNPEEYFKLGSSISG 413 Query: 418 VVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGY 477 V+++DA+++ I LG+KQL E+P++++ KKG + ++ +KG V + + G+ Sbjct: 414 KVIELDAKKQNIKLGIKQLEENPWDDFSKSYKKGDTLEVEIVEKKSKGVQVRVYGKIMGF 473 Query: 478 LRASEASRDRVEDAT--LVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVN 535 + + + L++GD+++ T +D KN+ + LS RA E + I++ Sbjct: 474 ISKIQLGDTKESSLETFENLNIGDKLKVIITNIDFKNKLVLLSYRAYKEQKSSEEISSYL 533 Query: 536 KQEDANFSNNAMAEAFKA 553 +ED S A K Sbjct: 534 FKEDDEESYKPFANLLKR 551 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 101/472 (21%), Positives = 195/472 (41%), Gaps = 27/472 (5%) Query: 92 HEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRPVRDTLHLEGK 150 E ++ + + E +V+GV+ +K V++ F+ +T+ G Sbjct: 10 QENYLKVLEKVELGSSVSGVVINVMKDYVLVDIGYKSEGFIKIDEF------ETIPSIGD 63 Query: 151 ELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVD 210 +L+ V K+ + V+ + + + + +KG + G V Sbjct: 64 KLDAIVTKVGGELGLVLSVAKLDSLNLQDKIDEYISNR----KVLKGKILAELSSGYKVQ 119 Query: 211 L-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERT-RVSLGLKQLGED--- 265 + V G + ++ K E + G + V++ D+ R+ L + L + Sbjct: 120 INENVIGFMP----SYLSSKFRDEKLKRGLVVEFYVVQADKTDGLRLILDRRTLEREREL 175 Query: 266 -PWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNV 324 + Y EG + G V +TDY ++++ V G++H + N+ + + V Sbjct: 176 VKKKELVSSYNEGDIVDGVVERITDYSAIIKVKNLVLGVLHKRNIA-FNRVENIEDFIRV 234 Query: 325 GDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLD 384 GD + + ++ ++ ++ L LK K NPW + V+GK+ I FG + LD Sbjct: 235 GDKLRLKIIKLNVNAVKMELSLKALKTNPWDSVEAKYKVESIVKGKVVKILPFGAVVELD 294 Query: 385 GGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNW 444 I G +H+S+ SW + K G + +L++D E ++ISLG+KQ+ E+P+NN Sbjct: 295 SEISGFIHISNFSWVRVIKSPQELVKVGQIVEVKILEIDKENQKISLGIKQVNENPWNNL 354 Query: 445 VALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAK 504 G +V G V + GA V + +G++ Y+ + S + +G + K Sbjct: 355 AQRCAVGKVVQGVVKNITKTGAFVSIEEGIDAYISKFDISWIDEVNPEEYFKLGSSISGK 414 Query: 505 FTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAAKG 556 +D K + I L ++ +E D + K + K +KG Sbjct: 415 VIELDAKKQNIKLGIKQLEENPWDDFSKSYKKGDTLEVEIVE-----KKSKG 461 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 87/366 (23%), Positives = 166/366 (45%), Gaps = 23/366 (6%) Query: 170 RRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRV 228 R + + ++LE ++ G V G+V N+ VD+G +G + I + Sbjct: 1 MRMENQEDLQENYLKVLEKVELGSSVSGVVINVMKDYVLVDIGYKSEGFIKIDEF----- 55 Query: 229 KHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVA-IAKRYPEGTKLTGRVTNL 287 I ++GD++ V K E + L + +L I + L G++ Sbjct: 56 ---ETIPSIGDKLDAIVTKVGGELG-LVLSVAKLDSLNLQDKIDEYISNRKVLKGKILAE 111 Query: 288 TDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERR-RISLGL 346 G V+I E V G + S + ++ + G VVE V+ D+ R+ L Sbjct: 112 LSSGYKVQINENVIGFMP-SYLSSKFRDEK----LKRGLVVEFYVVQADKTDGLRLILDR 166 Query: 347 KQCKAN----PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAG 402 + + ++ ++N+GD V+G ++ ITD+ I + + G++H +I++N Sbjct: 167 RTLERERELVKKKELVSSYNEGDIVDGVVERITDYSAIIKVKNLVLGVLHKRNIAFNRV- 225 Query: 403 EEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVD 462 E + GD++ +++++ ++ L +K L +P+++ A K +IV GKV + Sbjct: 226 ENIEDFIRVGDKLRLKIIKLNVNAVKMELSLKALKTNPWDSVEAKYKVESIVKGKVVKIL 285 Query: 463 AKGATVELADGVEGYLRASEASRDRV-EDATLVLSVGDEVEAKFTGVDRKNRAISLSVRA 521 GA VEL + G++ S S RV + ++ VG VE K +D++N+ ISL ++ Sbjct: 286 PFGAVVELDSEISGFIHISNFSWVRVIKSPQELVKVGQIVEVKILEIDKENQKISLGIKQ 345 Query: 522 KDEADE 527 +E Sbjct: 346 VNENPW 351 >UniRef50_Q67NT8 30S ribosomal protein S1 n=1 Tax=Symbiobacterium thermophilum RepID=Q67NT8_SYMTH Length = 441 Score = 333 bits (855), Expect = 8e-90, Method: Composition-based stats. Identities = 147/335 (43%), Positives = 225/335 (67%), Gaps = 7/335 (2%) Query: 18 TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ----GELEIQVGDEVDVALD 73 +PG IVRG VV + D ++VD G KSE IP + + + ++VGDEV V + Sbjct: 53 PKPGDIVRGQVVRVSDDSIMVDVGYKSEGIIPLNELSHRPLRSAHDAGLKVGDEVQVVVL 112 Query: 74 AVE-DGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLP 132 +V+ G G +S+ +A AW +E+ +E E + + VKGG V+L G+RAFLP Sbjct: 113 SVDTKGEGGLRISKRRADEQLAWAEVERKFEAGEVIEAEVTEAVKGGLVVDL-GLRAFLP 171 Query: 133 GSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEG 192 S VD V D G+++ K+I+LD + V++SR+ V+E+E +A R++ +QEG Sbjct: 172 ASQVDRGYVADLSKFVGQKIRVKIIELDPYKGRVILSRKQVLEAERTAARERFWSTVQEG 231 Query: 193 MEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRER 252 ++G VK++TD+GAF+DLGGVDGLLHI++M++ R+KHPS++V+ G+ I VKVL+ DRE+ Sbjct: 232 DVLEGTVKSITDFGAFIDLGGVDGLLHISEMSYGRIKHPSQVVSEGERIKVKVLRLDREK 291 Query: 253 TRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWT 312 +VSLGLKQ+ DPW ++ ++YPEG + G V LT +G FVE+E GV+GL+H+S+M Sbjct: 292 GKVSLGLKQVLPDPWDSVEEKYPEGAIVEGTVARLTTFGAFVELEPGVDGLIHISQMAD- 350 Query: 313 NKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLK 347 + +P +VV++GDVV+V V+++D + RRISL L+ Sbjct: 351 RRINNPGEVVSIGDVVKVKVINVDAQNRRISLSLR 385 Score = 281 bits (718), Expect = 6e-74, Method: Composition-based stats. Identities = 112/371 (30%), Positives = 192/371 (51%), Gaps = 17/371 (4%) Query: 189 LQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEI-VNVGDEITVKVL 246 + G V+G V ++D VD+G +G++ + +++ + ++ + + VGDE+ V VL Sbjct: 53 PKPGDIVRGQVVRVSDDSIMVDVGYKSEGIIPLNELSHRPLRSAHDAGLKVGDEVQVVVL 112 Query: 247 KFDRERT---RVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGL 303 D + R+S + + W + +++ G + VT G V++ G+ Sbjct: 113 SVDTKGEGGLRIS-KRRADEQLAWAEVERKFEAGEVIEAEVTEAVKGGLVVDL--GLRAF 169 Query: 304 VHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPW----QQFAE 359 + S++ SK V G + V ++++D + R+ L KQ ++F Sbjct: 170 LPASQV-DRGYVADLSKFV--GQKIRVKIIELDPYKGRVILSRKQVLEAERTAARERFWS 226 Query: 360 THNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVV 419 T +GD +EG +KSITDFG FI L GG+DGL+H+S++S+ + + +G+ I V Sbjct: 227 TVQEGDVLEGTVKSITDFGAFIDL-GGVDGLLHISEMSYGRI-KHPSQVVSEGERIKVKV 284 Query: 420 LQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLR 479 L++D E+ ++SLG+KQ+ DP+++ +GAIV G V + GA VEL GV+G + Sbjct: 285 LRLDREKGKVSLGLKQVLPDPWDSVEEKYPEGAIVEGTVARLTTFGAFVELEPGVDGLIH 344 Query: 480 ASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQED 539 S+ + R+ + V+S+GD V+ K VD +NR ISLS+RA E +AIA Sbjct: 345 ISQMADRRINNPGEVVSIGDVVKVKVINVDAQNRRISLSLRAAIEELAAEAIAADVATPY 404 Query: 540 ANFSNNAMAEA 550 + EA Sbjct: 405 RDVVPAEAGEA 415 Score = 61.1 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 27/76 (35%), Gaps = 3/76 (3%) Query: 15 EIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE---LEIQVGDEVDVA 71 E + G+IV G V + V+ + I Q + + + +GD V V Sbjct: 310 EEKYPEGAIVEGTVARLTTFGAFVELEPGVDGLIHISQMADRRINNPGEVVSIGDVVKVK 369 Query: 72 LDAVEDGFGETLLSRE 87 + V+ LS Sbjct: 370 VINVDAQNRRISLSLR 385 >UniRef50_C0QT24 Ribosomal protein S01 n=1 Tax=Persephonella marina EX-H1 RepID=C0QT24_PERMH Length = 550 Score = 331 bits (850), Expect = 3e-89, Method: Composition-based stats. Identities = 157/557 (28%), Positives = 272/557 (48%), Gaps = 22/557 (3%) Query: 4 SFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQ 63 F +L EES G V GV+V I D VD G K+E I + + Sbjct: 7 EFEKLLEESQDIPYYSKGERVTGVIVRIQDDYAFVDVGQKTEVVIDKNEI------NGLS 60 Query: 64 VGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVE 123 GD++ + G ++SR EA +E A+ E + ++ K+ GF V+ Sbjct: 61 EGDQITAVYLGRRNKDGYLVISRRPLIFSEALQRVEDAFSKGEKIGAKLDKKINKGFLVD 120 Query: 124 LNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKR--NNVVVSRRAVIESENSAE 181 L G++AFLP S +R + E + ++++D+ R +VVSR+ V++ E + Sbjct: 121 LGGVKAFLPYSESGLRRDEELPPP---EFDVYILRIDRDRKPPGIVVSRKKVLDEEIKRK 177 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVD-GLLHITDMAWKRVKHPSEIVNVGDE 240 RD++ L+EG +V+G V+ + + GA + L + G L + +W R + SE ++VGDE Sbjct: 178 RDEIFSLLEEGKQVRGRVEKVQENGAVLSLERIVFGFLPRSLYSWDRDRSISE-LSVGDE 236 Query: 241 ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV 300 I + V DRE ++ + L DPW K G ++ + ++ D+G V+ + Sbjct: 237 IDLVVKSIDRENQKIIFSKRDLEPDPWKTFDK--EVGDQIEVEIKDINDFGLIVKTGA-L 293 Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAET 360 EG +H SE + G V+ ++++D E RR+ L +K +P +F E Sbjct: 294 EGFIHKSETSHLRP-ENYKNSFRKGQKVKAKIIELDRENRRLKLSIKALHPHPVDKFLEE 352 Query: 361 HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL 420 + +G VEGKIK I + F+ L ++G++HL D +WN + + K VL Sbjct: 353 NPEGSVVEGKIKEIRNKIAFVDLGKDVEGVIHLEDATWNPKIKNIGQVLKGKRLREFKVL 412 Query: 421 QVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRA 480 E++++ LG+KQ ++P+ + + + G ++ KV + +GA V++ + VEG++ Sbjct: 413 G--REKDKVRLGIKQFRDNPWEEFFSKHSVGDVIKAKVKKLIDRGAFVDINEDVEGFIPL 470 Query: 481 SEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVN-KQED 539 SE S++++E + LS+G E+EAK + K I LS++A ++ EK I V K + Sbjct: 471 SEISKEKIEIPSDKLSLGQEIEAKIIKI--KGHDIILSIKALEKDKEKKEIEEVMRKVKP 528 Query: 540 ANFSNNAMAEAFKAAKG 556 + E K Sbjct: 529 KGEGLATLGELLKEKLK 545 >UniRef50_A4J3N5 Hydroxymethylbutenyl pyrophosphate reductase n=3 Tax=Clostridia RepID=A4J3N5_DESRM Length = 672 Score = 329 bits (844), Expect = 2e-88, Method: Composition-based stats. Identities = 147/376 (39%), Positives = 226/376 (60%), Gaps = 11/376 (2%) Query: 2 TESFAQL------FEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK- 54 Q+ E+++ + G +V+G+VV + D VLVD KSE IP ++ Sbjct: 273 MNEMDQMTNGEEGMSEAMEVKSPQAGELVKGIVVQVGMDEVLVDIRAKSEGVIPRKEMAF 332 Query: 55 --NAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVI 112 + ++VGDE++ + ED G+ +LS+E+A +AW LE+A E + GV+ Sbjct: 333 YGVDNLQEIVKVGDEIECVVIKAEDNEGKIILSKERADAEKAWDGLEEAMEQGTIIKGVV 392 Query: 113 NGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRA 172 VKGG V++ G+RAFLP SLV+ V D +E E +VI+++++R VVVSR+A Sbjct: 393 REVVKGGMLVDV-GVRAFLPASLVERGYVEDLSKYLNQEFEVRVIEMNKQRKKVVVSRKA 451 Query: 173 VIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPS 232 V+E +N+ +R++LL +LQEG VKGIV+ +T++GAFVDLGG+DGLLHI++M+W R+ HP Sbjct: 452 VLEEQNARKREELLASLQEGQIVKGIVRRITNFGAFVDLGGLDGLLHISEMSWHRINHPQ 511 Query: 233 EIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGC 292 E+V VGDE+ V VLK D + ++SLGLKQ+ +PW + ++YP G +V L +G Sbjct: 512 EVVKVGDELEVMVLKVDTQNEKISLGLKQVLPNPWDNVEEKYPVGNIFNAKVVRLAPFGA 571 Query: 293 FVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN 352 FV++E GVEGLVH+S + P VV G+ V+V VL +D +R+ L +++ Sbjct: 572 FVQLEPGVEGLVHISHLAD-RHVEKPEDVVKEGEEVQVKVLSMDPSEKRVRLSIREVNGE 630 Query: 353 PWQQFAETHNKGDRVE 368 K + V+ Sbjct: 631 RRSAREARPRKQEEVQ 646 Score = 277 bits (709), Expect = 7e-73, Method: Composition-based stats. Identities = 113/448 (25%), Positives = 194/448 (43%), Gaps = 32/448 (7%) Query: 132 PGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQE 191 P V+ G E+ + ++ + E + ++ + E Sbjct: 232 PTYHVESARELRKEWFLGHEIVGLTAGASTPDAIIEEVKKRMNEMDQMTNGEEGMSEAME 291 Query: 192 ------GMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 G VKGIV + VD+ +G++ +MA+ V + EIV VGDEI Sbjct: 292 VKSPQAGELVKGIVVQVGMDEVLVDIRAKSEGVIPRKEMAFYGVDNLQEIVKVGDEIECV 351 Query: 245 VLKFDRERTRVSLG-LKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGL 303 V+K + ++ L + E W + + +GT + G V + G V++ GV Sbjct: 352 VIKAEDNEGKIILSKERADAEKAWDGLEEAMEQGTIIKGVVREVVKGGMLVDV--GVRAF 409 Query: 304 VHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETH-- 361 + S + SK + EV V++++++R+++ + K + E Sbjct: 410 LPAS-LVERGYVEDLSKYL--NQEFEVRVIEMNKQRKKVVVSRKAVLEEQNARKREELLA 466 Query: 362 --NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVV 419 +G V+G ++ IT+FG F+ L GG+DGL+H+S++SW+ K GDE+ +V Sbjct: 467 SLQEGQIVKGIVRRITNFGAFVDL-GGLDGLLHISEMSWHRIN-HPQEVVKVGDELEVMV 524 Query: 420 LQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLR 479 L+VD + E+ISLG+KQ+ +P++N G I KV + GA V+L GVEG + Sbjct: 525 LKVDTQNEKISLGLKQVLPNPWDNVEEKYPVGNIFNAKVVRLAPFGAFVQLEPGVEGLVH 584 Query: 480 ASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQED 539 S + VE V+ G+EV+ K +D + + LS+R + A KQE+ Sbjct: 585 ISHLADRHVEKPEDVVKEGEEVQVKVLSMDPSEKRVRLSIREVNGERRSAREARPRKQEE 644 Query: 540 AN-------------FSNNAMAEAFKAA 554 + + FK Sbjct: 645 VQEQNVMNETPEEKITLGDVFGDMFKEK 672 Score = 61.9 bits (149), Expect = 6e-08, Method: Composition-based stats. Identities = 15/106 (14%), Positives = 33/106 (31%), Gaps = 3/106 (2%) Query: 15 EIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQGELEIQVGDEVDVA 71 E + G+I VV + V E + + + E ++ G+EV V Sbjct: 550 EEKYPVGNIFNAKVVRLAPFGAFVQLEPGVEGLVHISHLADRHVEKPEDVVKEGEEVQVK 609 Query: 72 LDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVK 117 + +++ LS + + + E + + Sbjct: 610 VLSMDPSEKRVRLSIREVNGERRSAREARPRKQEEVQEQNVMNETP 655 >UniRef50_C5S7U3 RNA binding S1 domain protein n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S7U3_CHRVI Length = 402 Score = 329 bits (844), Expect = 2e-88, Method: Composition-based stats. Identities = 137/365 (37%), Positives = 215/365 (58%), Gaps = 14/365 (3%) Query: 1 MTES--FAQLFEE------SLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQ 52 M+ES F L E ++ E G V G ++AI ++ VD G KSE + Sbjct: 1 MSESASFEDLLNEFDQTHPQAQKGEPAVGDKVSGTLIAIGEEFAFVDLGAKSEGRLDLAV 60 Query: 53 FKNAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVI 112 ++A+G+L+ VGD V+ + ++ G LL + A ++ LE AY V G + Sbjct: 61 IRDAEGQLKYAVGDTVETHVTGKDEESGMLLLGSQHAHKYHGVDELESAYRQGLPVQGQV 120 Query: 113 NGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLD-QKRNNVVVSRR 171 G VKGG V++ G+RAF P S +D+R + D G++L+F++ K + +R N+VVSRR Sbjct: 121 TGAVKGGCEVQVAGVRAFCPASQIDIRFIEDLSEFVGQKLDFRITKFEGGRRPNLVVSRR 180 Query: 172 AVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHP 231 A++E E + ++L L+EG + G V +L DYGAFVDLGG++G++HI+ +A+ VKHP Sbjct: 181 ALLEEEQRLKAEELRAQLKEGAVLTGTVTSLKDYGAFVDLGGLEGMIHISQLAFGHVKHP 240 Query: 232 SEIVNVGDEITVKVLKFDR-----ERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTN 286 E++ VG I V VL+ + +R +++L ++ L DPW+ +++P GT++ GRV Sbjct: 241 KEVLQVGQPIEVSVLRIEPATDAKKRDKIALSIRALSRDPWLDAIEQFPAGTRVQGRVAR 300 Query: 287 LTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGL 346 L +G F+E+ GV+GLVH+SE+ + HPS V+ GD V V+ +D ERRRISL L Sbjct: 301 LQPFGAFIELAPGVDGLVHISELGAGRRVQHPSDVLKEGDEVTATVIGVDLERRRISLSL 360 Query: 347 KQCKA 351 + + Sbjct: 361 DENRE 365 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 98/401 (24%), Positives = 174/401 (43%), Gaps = 24/401 (5%) Query: 172 AVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKH 230 ++ + G +V G + + + AFVDLG +G L D+A R Sbjct: 9 DLLNEFDQTHPQAQKGEPAVGDKVSGTLIAIGEEFAFVDLGAKSEGRL---DLAVIRDAE 65 Query: 231 PSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPW-VAIAKRYPEGTKLTGRVTNLTD 289 VGD + V D E + LG + + + Y +G + G+VT Sbjct: 66 GQLKYAVGDTVETHVTGKDEESGMLLLGSQHAHKYHGVDELESAYRQGLPVQGQVTGAVK 125 Query: 290 YGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERR-RISLGLKQ 348 GC V++ GV S++ S+ V G ++ + + RR + + + Sbjct: 126 GGCEVQVA-GVRAFCPASQI-DIRFIEDLSEFV--GQKLDFRITKFEGGRRPNLVVSRRA 181 Query: 349 CKANPW----QQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEE 404 ++ +G + G + S+ D+G F+ L GG++G++H+S +++ + Sbjct: 182 LLEEEQRLKAEELRAQLKEGAVLTGTVTSLKDYGAFVDL-GGLEGMIHISQLAFGHV-KH 239 Query: 405 AVREYKKGDEIAAVVLQVDA-----ERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVT 459 + G I VL+++ +R++I+L ++ L+ DP+ + + G V G+V Sbjct: 240 PKEVLQVGQPIEVSVLRIEPATDAKKRDKIALSIRALSRDPWLDAIEQFPAGTRVQGRVA 299 Query: 460 AVDAKGATVELADGVEGYLRASEA-SRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLS 518 + GA +ELA GV+G + SE + RV+ + VL GDEV A GVD + R ISLS Sbjct: 300 RLQPFGAFIELAPGVDGLVHISELGAGRRVQHPSDVLKEGDEVTATVIGVDLERRRISLS 359 Query: 519 VRAKDE--ADEKDAIATVNKQEDANFSNNAMAEAFKAAKGE 557 + E A IAT K+ A + + + + + Sbjct: 360 LDENREVDAAAAVVIATAAKKPAAEKTMGSFGALLQESLKK 400 Score = 204 bits (519), Expect = 9e-51, Method: Composition-based stats. Identities = 92/340 (27%), Positives = 165/340 (48%), Gaps = 19/340 (5%) Query: 105 AETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKR 163 + V+G + + V+L L +++ + + G +E V D++ Sbjct: 29 GDKVSGTLIAIGEEFAFVDLGAKSEGRLDLAVIRDAEGQ-LKYAVGDTVETHVTGKDEES 87 Query: 164 NNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDM 223 +++ + D+L ++G+ V+G V G V + GV + + Sbjct: 88 GMLLLG---SQHAHKYHGVDELESAYRQGLPVQGQVTGAVKGGCEVQVAGVRAFCPASQI 144 Query: 224 AWKRVKHPSEIVNVGDEITVKVLKFDRERT-RVSLGLKQLGED----PWVAIAKRYPEGT 278 + ++ SE VG ++ ++ KF+ R + + + L E+ + + EG Sbjct: 145 DIRFIEDLSEF--VGQKLDFRITKFEGGRRPNLVVSRRALLEEEQRLKAEELRAQLKEGA 202 Query: 279 KLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDE- 337 LTG VT+L DYG FV++ G+EG++H+S++ + + HP +V+ VG +EV VL I+ Sbjct: 203 VLTGTVTSLKDYGAFVDLG-GLEGMIHISQLAFGH-VKHPKEVLQVGQPIEVSVLRIEPA 260 Query: 338 ----ERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHL 393 +R +I+L ++ +PW E G RV+G++ + FG FI L G+DGLVH+ Sbjct: 261 TDAKKRDKIALSIRALSRDPWLDAIEQFPAGTRVQGRVARLQPFGAFIELAPGVDGLVHI 320 Query: 394 SDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGV 433 S++ + K+GDE+ A V+ VD ER RISL + Sbjct: 321 SELGAGRRVQHPSDVLKEGDEVTATVIGVDLERRRISLSL 360 Score = 60.7 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 13/96 (13%), Positives = 33/96 (34%), Gaps = 4/96 (4%) Query: 16 IETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQF----KNAQGELEIQVGDEVDVA 71 + G+ V+G V + ++ + + + + ++ GDEV Sbjct: 286 EQFPAGTRVQGRVARLQPFGAFIELAPGVDGLVHISELGAGRRVQHPSDVLKEGDEVTAT 345 Query: 72 LDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAET 107 + V+ LS ++ + +A + A + Sbjct: 346 VIGVDLERRRISLSLDENREVDAAAAVVIATAAKKP 381 >UniRef50_C0GDV0 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GDV0_9FIRM Length = 678 Score = 328 bits (841), Expect = 4e-88, Method: Composition-based stats. Identities = 144/378 (38%), Positives = 231/378 (61%), Gaps = 6/378 (1%) Query: 16 IETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQV---GDEVDVAL 72 E G +V G VV + D VLVD G KSE +P ++ ++ V G EV+VA+ Sbjct: 301 KEFSAGDVVTGTVVQVSDDEVLVDIGYKSEGVLPRQEVILEGDQMLADVMENGQEVEVAV 360 Query: 73 DAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNG-IRAFL 131 V+D G +LSR+ +R + W LEKA+E+ ++G + V G VEL G AF+ Sbjct: 361 KKVDDQEGRIILSRKAIERKQKWAELEKAFEEGTILSGKVKEAVPAGLVVELGGGYDAFM 420 Query: 132 PGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQE 191 PGSLVDVR + D +G+E+ FK+I++ ++ +++SR+ V+E E + ++D++L L+ Sbjct: 421 PGSLVDVRYIPDFNEFQGQEISFKIIEMRPEKEKLILSRKQVLEEEAAVQKDKVLAELEP 480 Query: 192 GMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRE 251 G +KG VK LT++GAFVD+GG+DGL+HI++++W R+ +P E+++VGDEI VKV++ E Sbjct: 481 GQIIKGTVKRLTNFGAFVDVGGIDGLVHISEISWHRIDNPGEVLSVGDEIEVKVIEVIPE 540 Query: 252 RTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDW 311 R R+ L L+Q DPW + +++ G + G+VT + D+G FVE+ GVEGLVH+S++ Sbjct: 541 RERIGLSLRQAQPDPWTEVGQKFSAGDVVEGKVTRIVDFGAFVELIPGVEGLVHISQLA- 599 Query: 312 TNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKI 371 PS+VV GDVV+V +LDI+ + +R+SL ++ P ++ + G Sbjct: 600 NYHVKQPSEVVQQGDVVKVKILDINTDGKRVSLSMRDAAPRPKKEQTRQVQQQPEDTGTG 659 Query: 372 KSITD-FGIFIGLDGGID 388 ++ D FG L+ + Sbjct: 660 VTLGDVFGDLFDLEKDKE 677 Score = 295 bits (755), Expect = 3e-78, Method: Composition-based stats. Identities = 106/409 (25%), Positives = 192/409 (46%), Gaps = 14/409 (3%) Query: 151 ELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVD 210 ++ + K++ ++N + + E + DQ ++ G V G V ++D VD Sbjct: 268 TIKEVIGKMENEKNTELQEEQTATEEVS---LDQEIKEFSAGDVVTGTVVQVSDDEVLVD 324 Query: 211 LG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLG-EDPWV 268 +G +G+L ++ + + ++++ G E+ V V K D + R+ L K + + W Sbjct: 325 IGYKSEGVLPRQEVILEGDQMLADVMENGQEVEVAVKKVDDQEGRIILSRKAIERKQKWA 384 Query: 269 AIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVV 328 + K + EGT L+G+V G VE+ G + + S + ++ G + Sbjct: 385 ELEKAFEEGTILSGKVKEAVPAGLVVELGGGYDAFMPGS-LVDVRYIPDFNEF--QGQEI 441 Query: 329 EVMVLDIDEERRRISLGLKQCKANPWQQFAE----THNKGDRVEGKIKSITDFGIFIGLD 384 ++++ E+ ++ L KQ + G ++G +K +T+FG F+ + Sbjct: 442 SFKIIEMRPEKEKLILSRKQVLEEEAAVQKDKVLAELEPGQIIKGTVKRLTNFGAFVDV- 500 Query: 385 GGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNW 444 GGIDGLVH+S+ISW+ + GDEI V++V ERERI L ++Q DP+ Sbjct: 501 GGIDGLVHISEISWHRI-DNPGEVLSVGDEIEVKVIEVIPERERIGLSLRQAQPDPWTEV 559 Query: 445 VALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAK 504 G +V GKVT + GA VEL GVEG + S+ + V+ + V+ GD V+ K Sbjct: 560 GQKFSAGDVVEGKVTRIVDFGAFVELIPGVEGLVHISQLANYHVKQPSEVVQQGDVVKVK 619 Query: 505 FTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKA 553 ++ + +SLS+R +K+ V +Q + + + + F Sbjct: 620 ILDINTDGKRVSLSMRDAAPRPKKEQTRQVQQQPEDTGTGVTLGDVFGD 668 Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats. Identities = 105/399 (26%), Positives = 197/399 (49%), Gaps = 16/399 (4%) Query: 67 EVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN- 125 + + +E+ L + A + K + + VTG + V++ Sbjct: 268 TIKEVIGKMENEKNTELQEEQTATEEVSLDQEIKEFSAGDVVTGTVVQVSDDEVLVDIGY 327 Query: 126 GIRAFLPGSLVDVRPVRDTLHLE--GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERD 183 LP V + + + G+E+E V K+D + +++SR+A+ E + Sbjct: 328 KSEGVLPRQEVILEGDQMLADVMENGQEVEVAVKKVDDQEGRIILSRKAI---ERKQKWA 384 Query: 184 QLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 +L + +EG + G VK G V+L GG D + + + + + +E G EI+ Sbjct: 385 ELEKAFEEGTILSGKVKEAVPAGLVVELGGGYDAFMPGSLVDVRYIPDFNEF--QGQEIS 442 Query: 243 VKVLKFDRERTRVSLGLKQLGED----PWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE 298 K+++ E+ ++ L KQ+ E+ + G + G V LT++G FV++ Sbjct: 443 FKIIEMRPEKEKLILSRKQVLEEEAAVQKDKVLAELEPGQIIKGTVKRLTNFGAFVDVG- 501 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFA 358 G++GLVH+SE+ W ++ +P +V++VGD +EV V+++ ER RI L L+Q + +PW + Sbjct: 502 GIDGLVHISEISW-HRIDNPGEVLSVGDEIEVKVIEVIPERERIGLSLRQAQPDPWTEVG 560 Query: 359 ETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAV 418 + + GD VEGK+ I DFG F+ L G++GLVH+S ++ N ++ ++GD + Sbjct: 561 QKFSAGDVVEGKVTRIVDFGAFVELIPGVEGLVHISQLA-NYHVKQPSEVVQQGDVVKVK 619 Query: 419 VLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGK 457 +L ++ + +R+SL ++ A P ++ TG Sbjct: 620 ILDINTDGKRVSLSMRDAAPRPKKEQTRQVQQQPEDTGT 658 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 68/182 (37%), Gaps = 8/182 (4%) Query: 6 AQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE---LEI 62 ++ E PG I++G V + VD G + + + + + + Sbjct: 466 EAAVQKDKVLAELEPGQIIKGTVKRLTNFGAFVDVGG-IDGLVHISEISWHRIDNPGEVL 524 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 VGDE++V + V LS +A+ W + + + + V G + V G V Sbjct: 525 SVGDEIEVKVIEVIPERERIGLSLRQAQPDP-WTEVGQKFSAGDVVEGKVTRIVDFGAFV 583 Query: 123 E-LNGIRAFLPGSLVDVRPVRDTLHLE--GKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 E + G+ + S + V+ + G ++ K++ ++ V +S R Sbjct: 584 ELIPGVEGLVHISQLANYHVKQPSEVVQQGDVVKVKILDINTDGKRVSLSMRDAAPRPKK 643 Query: 180 AE 181 + Sbjct: 644 EQ 645 >UniRef50_B8CWY2 4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWY2_HALOH Length = 678 Score = 326 bits (837), Expect = 1e-87, Method: Composition-based stats. Identities = 139/358 (38%), Positives = 221/358 (61%), Gaps = 5/358 (1%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE---IQVGDE 67 + + + G V+G VV I + V VD G K+E IP + + E ++ G+E Sbjct: 296 DDNNPADLKKGQQVKGKVVEIGDNGVYVDVGYKTEGLIPLRELSHRDFEDPHEIVEEGEE 355 Query: 68 VDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGI 127 +DV + +ED G +LS+++A +AW + KAYE+ E + + +VKGG V++ G+ Sbjct: 356 IDVIVLTLEDEEGNMVLSKKRADFEKAWERILKAYENDEIIEAEVTREVKGGLVVDI-GL 414 Query: 128 RAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLE 187 R F+ S V + V D GK L KVI++++ +NNVV+S + V+E E ++++ LE Sbjct: 415 RGFVHASHVAIGYVEDLSDYVGKTLRLKVIEVERDKNNVVLSAKKVLEEEREKQKEKTLE 474 Query: 188 NLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLK 247 LQEG VKG V + D+GAFVDLGG++GLLHI++M+W R++HPSE++ G EI VKVL Sbjct: 475 ELQEGQVVKGKVTKIVDFGAFVDLGGIEGLLHISEMSWGRIEHPSEVLEEGQEIEVKVLA 534 Query: 248 FDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVS 307 ++E R+SLGLKQL DPW AK++ EG ++G +T + D+G F+EIE G+EGL+H+S Sbjct: 535 VNKEEERISLGLKQLLPDPWEEFAKKHYEGEVVSGTITKIVDFGAFMEIENGIEGLIHIS 594 Query: 308 EMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGD 365 ++ P +VV+VG+ ++ +++ID E++R+ L +K + P K + Sbjct: 595 QLSH-RHVKTPDEVVSVGEEIKAEIINIDPEQKRVGLSIKALEEQPETPKKVEAPKKE 651 Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats. Identities = 115/381 (30%), Positives = 198/381 (51%), Gaps = 17/381 (4%) Query: 187 ENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKV 245 +L++G +VKG V + D G +VD+G +GL+ + +++ + + P EIV G+EI V V Sbjct: 301 ADLKKGQQVKGKVVEIGDNGVYVDVGYKTEGLIPLRELSHRDFEDPHEIVEEGEEIDVIV 360 Query: 246 LKFDRERTRVSLGLKQLG-EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLV 304 L + E + L K+ E W I K Y + VT G V+I G+ G V Sbjct: 361 LTLEDEEGNMVLSKKRADFEKAWERILKAYENDEIIEAEVTREVKGGLVVDI--GLRGFV 418 Query: 305 HVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLG----LKQCKANPWQQFAET 360 H S + S V G + + V++++ ++ + L L++ + ++ E Sbjct: 419 HASHVAIGY-VEDLSDYV--GKTLRLKVIEVERDKNNVVLSAKKVLEEEREKQKEKTLEE 475 Query: 361 HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL 420 +G V+GK+ I DFG F+ L GGI+GL+H+S++SW E ++G EI VL Sbjct: 476 LQEGQVVKGKVTKIVDFGAFVDL-GGIEGLLHISEMSWGRI-EHPSEVLEEGQEIEVKVL 533 Query: 421 QVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRA 480 V+ E ERISLG+KQL DP+ + + +G +V+G +T + GA +E+ +G+EG + Sbjct: 534 AVNKEEERISLGLKQLLPDPWEEFAKKHYEGEVVSGTITKIVDFGAFMEIENGIEGLIHI 593 Query: 481 SEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEK----DAIATVNK 536 S+ S V+ V+SVG+E++A+ +D + + + LS++A +E E +A Sbjct: 594 SQLSHRHVKTPDEVVSVGEEIKAEIINIDPEQKRVGLSIKALEEQPETPKKVEAPKKEPT 653 Query: 537 QEDANFSNNAMAEAFKAAKGE 557 +E+ + S + E + Sbjct: 654 RENESTSGVTIGEIVGDILKK 674 >UniRef50_B8G2Q3 Hydroxymethylbutenyl pyrophosphate reductase n=2 Tax=Desulfitobacterium hafniense RepID=B8G2Q3_DESHD Length = 661 Score = 325 bits (833), Expect = 3e-87, Method: Composition-based stats. Identities = 130/363 (35%), Positives = 213/363 (58%), Gaps = 5/363 (1%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQF---KNAQG 58 T + + + G++V G VV I+ D V VD G KSE I ++ + Q Sbjct: 279 THEMMNMEDWAEGMQNLHRGALVTGTVVKINHDEVFVDLGWKSEGVIALKELTVASDLQT 338 Query: 59 ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 + +GD++ + VE+ G +LS+ +A A L++ E E + G + VKG Sbjct: 339 SDIVAIGDQISAVVLRVENEEGNPVLSKRRADEMAAVDKLKELAESKEEIQGKVADVVKG 398 Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 G V++ G+R F+P S + V D +G+ L +VI+ D + VV+S++ +++ E Sbjct: 399 GLIVDV-GMRGFVPASQIQPGYVEDLNQFKGQTLRLRVIEFDPAKRRVVLSQKEILQEEQ 457 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVG 238 +A+++ LL LQEG V G+VK L +GAFVD+GGVDGLLH++D+A+ R+KHPSE VNVG Sbjct: 458 AAKKEHLLATLQEGDVVSGVVKRLAQFGAFVDIGGVDGLLHVSDIAYTRIKHPSEYVNVG 517 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE 298 DE+ V++LK D+E+ ++SLGLKQL PW + ++Y G+ +TG+V + +G FV++E+ Sbjct: 518 DEVEVQILKVDKEQGKISLGLKQLKPSPWESAPEKYALGSLVTGKVVRIAPFGAFVQLED 577 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFA 358 G++ L+H+S++ + VV VGD+V+ V++ E +RISL +++ A Sbjct: 578 GIDALIHISQLS-EKRVNKVEDVVKVGDMVQAKVIECKPEEKRISLSIREAAAEAQATED 636 Query: 359 ETH 361 Sbjct: 637 AEL 639 Score = 264 bits (675), Expect = 6e-69, Method: Composition-based stats. Identities = 106/364 (29%), Positives = 181/364 (49%), Gaps = 13/364 (3%) Query: 163 RNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHIT 221 R + + E N + + ++NL G V G V + FVDLG +G++ + Sbjct: 269 RKMSTMENKETHEMMNMEDWAEGMQNLHRGALVTGTVVKINHDEVFVDLGWKSEGVIALK 328 Query: 222 DMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPE-GTKL 280 ++ S+IV +GD+I+ VL+ + E L ++ E V K E ++ Sbjct: 329 ELTVASDLQTSDIVAIGDQISAVVLRVENEEGNPVLSKRRADEMAAVDKLKELAESKEEI 388 Query: 281 TGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERR 340 G+V ++ G V++ G+ G V S++ ++ G + + V++ D +R Sbjct: 389 QGKVADVVKGGLIVDV--GMRGFVPASQIQPGY-VEDLNQF--KGQTLRLRVIEFDPAKR 443 Query: 341 RISLG----LKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDI 396 R+ L L++ +A + T +GD V G +K + FG F+ + GG+DGL+H+SDI Sbjct: 444 RVVLSQKEILQEEQAAKKEHLLATLQEGDVVSGVVKRLAQFGAFVDI-GGVDGLLHVSDI 502 Query: 397 SWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTG 456 ++ + GDE+ +L+VD E+ +ISLG+KQL P+ + G++VTG Sbjct: 503 AYTRI-KHPSEYVNVGDEVEVQILKVDKEQGKISLGLKQLKPSPWESAPEKYALGSLVTG 561 Query: 457 KVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAIS 516 KV + GA V+L DG++ + S+ S RV V+ VGD V+AK + + IS Sbjct: 562 KVVRIAPFGAFVQLEDGIDALIHISQLSEKRVNKVEDVVKVGDMVQAKVIECKPEEKRIS 621 Query: 517 LSVR 520 LS+R Sbjct: 622 LSIR 625 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 59/287 (20%), Positives = 125/287 (43%), Gaps = 12/287 (4%) Query: 267 WVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGD 326 W + G +TG V + FV++ EG++ + E+ + ++ S +V +GD Sbjct: 288 WAEGMQNLHRGALVTGTVVKINHDEVFVDLGWKSEGVIALKELTVAS-DLQTSDIVAIGD 346 Query: 327 VVEVMVLDIDEERRRISLGLKQCKANPWQQFAETH-NKGDRVEGKIKSITDFGIFIGLDG 385 + +VL ++ E L ++ + + ++GK+ + G+ + + Sbjct: 347 QISAVVLRVENEEGNPVLSKRRADEMAAVDKLKELAESKEEIQGKVADVVKGGLIVDV-- 404 Query: 386 GIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWV 445 G+ G V S I + + ++K G + V++ D + R+ L K++ ++ Sbjct: 405 GMRGFVPASQIQPGYVED--LNQFK-GQTLRLRVIEFDPAKRRVVLSQKEILQEEQAAKK 461 Query: 446 ALN----KKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEV 501 ++G +V+G V + GA V++ GV+G L S+ + R++ + ++VGDEV Sbjct: 462 EHLLATLQEGDVVSGVVKRLAQFGAFVDIG-GVDGLLHVSDIAYTRIKHPSEYVNVGDEV 520 Query: 502 EAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMA 548 E + VD++ ISL ++ + + A +A Sbjct: 521 EVQILKVDKEQGKISLGLKQLKPSPWESAPEKYALGSLVTGKVVRIA 567 Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats. Identities = 43/203 (21%), Positives = 76/203 (37%), Gaps = 14/203 (6%) Query: 6 AQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQGELEI 62 Q ++ + G +V GVV + + VD G + + + Sbjct: 456 EQAAKKEHLLATLQEGDVVSGVVKRLAQFGAFVDIGG-VDGLLHVSDIAYTRIKHPSEYV 514 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 VGDEV+V + V+ G+ L ++ K W + + Y VTG + G V Sbjct: 515 NVGDEVEVQILKVDKEQGKISLGLKQLKPSP-WESAPEKYALGSLVTGKVVRIAPFGAFV 573 Query: 123 EL-NGIRAFLPGSLVDVRPVRDTLH--LEGKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 +L +GI A + S + + V G ++ KVI+ + + +S R + Sbjct: 574 QLEDGIDALIHISQLSEKRVNKVEDVVKVGDMVQAKVIECKPEEKRISLSIREAAAEAQA 633 Query: 180 AERDQLLE------NLQEGMEVK 196 E +LL + G V+ Sbjct: 634 TEDAELLASQPEAPQVTIGDVVQ 656 Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 48/119 (40%), Gaps = 2/119 (1%) Query: 435 QLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLV 494 + + + + +GA+VTG V ++ V+L EG + E + + + Sbjct: 282 MMNMEDWAEGMQNLHRGALVTGTVVKINHDEVFVDLGWKSEGVIALKELTVASDLQTSDI 341 Query: 495 LSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKA 553 +++GD++ A V+ + LS R DE D + + E +A+ K Sbjct: 342 VAIGDQISAVVLRVENEEGNPVLSKRRADEMAAVDKLKEL--AESKEEIQGKVADVVKG 398 >UniRef50_C8WX93 RNA binding S1 domain protein n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WX93_ALIAD Length = 385 Score = 323 bits (828), Expect = 1e-86, Method: Composition-based stats. Identities = 129/354 (36%), Positives = 197/354 (55%), Gaps = 9/354 (2%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK---NAQ 57 M+E E L + R G +V G V A+D V V E I ++ Sbjct: 1 MSED----LREMLTDAAVREGDVVTGEVTAVDDHGVTVALPHGYEGHISPQELSAVPGTH 56 Query: 58 GELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVK 117 + VG V + V+ G LS+ +A++ AW +++ E E + I VK Sbjct: 57 PSDVVSVGSTVTAQVLKVDMESGHVTLSKRRAEQASAWERMQQLLESGEPIEVEIRDVVK 116 Query: 118 GGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESE 177 GG ++ G+RAF+P SLVD V + +G++L KVI++D ++N +++SRRAV+E E Sbjct: 117 GGLVADV-GVRAFIPASLVDRHFVENLEQFKGQKLRAKVIEVDPQKNKLILSRRAVLEEE 175 Query: 178 NSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNV 237 + A +L E L+ G ++G V+ LTD+GAFVD+GG DGL+HI+++++ V HPSE+V Sbjct: 176 SEARARKLFEELKPGDVIEGTVQRLTDFGAFVDVGGADGLVHISELSFSHVNHPSEVVRE 235 Query: 238 GDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE 297 GD + V+VL+ D E R+SL +K +PW A + G + G V + D+G FVE+ Sbjct: 236 GDRVKVRVLRVDPEAGRISLSIKAALPEPWETYAHEFQPGDVVQGVVRRVVDFGAFVELR 295 Query: 298 EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKA 351 G+EGLVHVS++ + PS V+ G V V VL +D ER+RISL ++ Sbjct: 296 PGLEGLVHVSQISNEH-VDKPSDVLQPGQEVTVRVLSVDPERKRISLSMRDSSQ 348 Score = 283 bits (723), Expect = 2e-74, Method: Composition-based stats. Identities = 98/379 (25%), Positives = 176/379 (46%), Gaps = 22/379 (5%) Query: 189 LQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLK 247 ++EG V G V + D+G V L G +G + +++ HPS++V+VG +T +VLK Sbjct: 14 VREGDVVTGEVTAVDDHGVTVALPHGYEGHISPQELSAVPGTHPSDVVSVGSTVTAQVLK 73 Query: 248 FDRERTRVSLGLKQLGEDP-WVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHV 306 D E V+L ++ + W + + G + + ++ G ++ GV + Sbjct: 74 VDMESGHVTLSKRRAEQASAWERMQQLLESGEPIEVEIRDVVKGGLVADV--GVRAFIPA 131 Query: 307 SEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQF----AETHN 362 S + + + + G + V+++D ++ ++ L + + E Sbjct: 132 S-LVDRHFVENLEQF--KGQKLRAKVIEVDPQKNKLILSRRAVLEEESEARARKLFEELK 188 Query: 363 KGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQV 422 GD +EG ++ +TDFG F+ + GG DGLVH+S++S++ ++GD + VL+V Sbjct: 189 PGDVIEGTVQRLTDFGAFVDV-GGADGLVHISELSFSHVN-HPSEVVREGDRVKVRVLRV 246 Query: 423 DAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASE 482 D E RISL +K +P+ + + G +V G V V GA VEL G+EG + S+ Sbjct: 247 DPEAGRISLSIKAALPEPWETYAHEFQPGDVVQGVVRRVVDFGAFVELRPGLEGLVHVSQ 306 Query: 483 ASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDE---------ADEKDAIAT 533 S + V+ + VL G EV + VD + + ISLS+R + ++ Sbjct: 307 ISNEHVDKPSDVLQPGQEVTVRVLSVDPERKRISLSMRDSSQPRGGQGRGGRRDRRPTEP 366 Query: 534 VNKQEDANFSNNAMAEAFK 552 N+ + + FK Sbjct: 367 RNEGASGPTLGDLFGDLFK 385 Score = 71.5 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 31/103 (30%), Positives = 51/103 (49%) Query: 435 QLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLV 494 + A ++G +VTG+VTAVD G TV L G EG++ E S + V Sbjct: 1 MSEDLREMLTDAAVREGDVVTGEVTAVDDHGVTVALPHGYEGHISPQELSAVPGTHPSDV 60 Query: 495 LSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQ 537 +SVG V A+ VD ++ ++LS R ++A + + + + Sbjct: 61 VSVGSTVTAQVLKVDMESGHVTLSKRRAEQASAWERMQQLLES 103 >UniRef50_A9BGS2 RNA binding S1 domain protein n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BGS2_PETMO Length = 532 Score = 323 bits (827), Expect = 2e-86, Method: Composition-based stats. Identities = 153/517 (29%), Positives = 268/517 (51%), Gaps = 23/517 (4%) Query: 1 MTES--FAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQG 58 M E F +L E E + G I+ G V I+ D + V + + Q + + Sbjct: 1 MMEEKTFEKLLNEQEIN-EVKKGKIIEGKVFEINSDGIWVAL-EGATGDVFVSQVELIKP 58 Query: 59 ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 E QV ++ V + D G +++ W + E + ++K Sbjct: 59 LQEYQVDQKILVEITKTNDAEGL----NFASEKRAVWNETMNKINEGENYPIIFKNRLKK 114 Query: 119 GFTVELNGIRA-FLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESE 177 G++V + G+ FLPGSL + P D +G+++ KVI + K V I+ Sbjct: 115 GYSVLIEGLIGAFLPGSLSLLSPKDDL--PQGEKM-AKVISKNGKNIVV------SIKDY 165 Query: 178 NSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVN 236 + Q +EGM + G+V+++ ++GAFV L ++GL+ ++++W + + Sbjct: 166 AEEKISQTFNEYEEGMVIDGVVEDIKNFGAFVRLNDHLNGLIPASEVSWDEKISIKDYLK 225 Query: 237 VGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI 296 VG ++ ++K DRE+ R+SL LK+L E+PW + ++YP G+ + G VT + +G V+I Sbjct: 226 VGQKVKALIIKLDREKKRISLSLKRLKENPWKTVDEKYPIGSIVQGTVTKILPFGFTVKI 285 Query: 297 EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQ 356 +EG+EGLVH +E+ W K S +VNVGD V+V +L+ID+E ++I+L KQ +PW+ Sbjct: 286 DEGLEGLVHETEIFWGRKG-RISDLVNVGDDVQVKILNIDKENKKINLSYKQVSGDPWEN 344 Query: 357 FAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIA 416 E + +G+ V G ++ + D G I +D GI G +H+S++SW+ ++ + +I Sbjct: 345 IEEKYYEGNIVTGTVEKVLDNGAIIKIDEGITGFLHVSELSWDFV-DDISTVLNEKQKIK 403 Query: 417 AVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELAD-GVE 475 ++++D + +R+ L V++ E+P+ K G V GK+ KGA V + VE Sbjct: 404 VKIIKIDKDNKRMRLSVRETKENPWKKASKEIKPGDTVKGKIIRFLDKGAIVLIDGYEVE 463 Query: 476 GYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKN 512 YL AS+AS + + S+GD++EAK + +N Sbjct: 464 AYLPASKASTN-SKSLEETYSIGDQIEAKVLEIGLEN 499 Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats. Identities = 111/437 (25%), Positives = 207/437 (47%), Gaps = 18/437 (4%) Query: 103 EDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHL-EGKELEFKVIKLDQ 161 + + + G + G V L G + S V++ ++ +++ ++ K + Sbjct: 20 KKGKIIEGKVFEINSDGIWVALEGATGDVFVSQVEL--IKPLQEYQVDQKILVEITKTND 77 Query: 162 KRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHIT 221 S + + ++ + + EG I KN G V + G+ G Sbjct: 78 AEGLNFASEKRAV-------WNETMNKINEGENYPIIFKNRLKKGYSVLIEGLIGAFLPG 130 Query: 222 DMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLT 281 ++ + P + + G+++ KV+ + + + + +K E+ Y EG + Sbjct: 131 SLS---LLSPKDDLPQGEKM-AKVISKNGKN--IVVSIKDYAEEKISQTFNEYEEGMVID 184 Query: 282 GRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRR 341 G V ++ ++G FV + + + GL+ SE+ W K + VG V+ +++ +D E++R Sbjct: 185 GVVEDIKNFGAFVRLNDHLNGLIPASEVSWDEKI-SIKDYLKVGQKVKALIIKLDREKKR 243 Query: 342 ISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVA 401 ISL LK+ K NPW+ E + G V+G + I FG + +D G++GLVH ++I W Sbjct: 244 ISLSLKRLKENPWKTVDEKYPIGSIVQGTVTKILPFGFTVKIDEGLEGLVHETEIFWGRK 303 Query: 402 GEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAV 461 G GD++ +L +D E ++I+L KQ++ DP+ N +G IVTG V V Sbjct: 304 G-RISDLVNVGDDVQVKILNIDKENKKINLSYKQVSGDPWENIEEKYYEGNIVTGTVEKV 362 Query: 462 DAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRA 521 GA +++ +G+ G+L SE S D V+D + VL+ +++ K +D+ N+ + LSVR Sbjct: 363 LDNGAIIKIDEGITGFLHVSELSWDFVDDISTVLNEKQKIKVKIIKIDKDNKRMRLSVRE 422 Query: 522 KDEADEKDAIATVNKQE 538 E K A + + Sbjct: 423 TKENPWKKASKEIKPGD 439 Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats. Identities = 79/367 (21%), Positives = 165/367 (44%), Gaps = 15/367 (4%) Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 +Q + +++G ++G V + G +V L G G + ++ + + P + V +I Sbjct: 13 EQEINEVKKGKIIEGKVFEINSDGIWVALEGATGDVFVSQV---ELIKPLQEYQVDQKIL 69 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 V++ K + K+ W + EG N G V IE + Sbjct: 70 VEITKTNDAEGLNFASEKRAV---WNETMNKINEGENYPIIFKNRLKKGYSVLIEGLIGA 126 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHN 362 + S + P + G+ + V+ + + I + +K Q + Sbjct: 127 FLPGS-----LSLLSPKDDLPQGEKM-AKVISKN--GKNIVVSIKDYAEEKISQTFNEYE 178 Query: 363 KGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQV 422 +G ++G ++ I +FG F+ L+ ++GL+ S++SW+ K G ++ A+++++ Sbjct: 179 EGMVIDGVVEDIKNFGAFVRLNDHLNGLIPASEVSWDEKI-SIKDYLKVGQKVKALIIKL 237 Query: 423 DAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASE 482 D E++RISL +K+L E+P+ G+IV G VT + G TV++ +G+EG + +E Sbjct: 238 DREKKRISLSLKRLKENPWKTVDEKYPIGSIVQGTVTKILPFGFTVKIDEGLEGLVHETE 297 Query: 483 ASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANF 542 R + +++VGD+V+ K +D++N+ I+LS + ++ + Sbjct: 298 IFWGRKGRISDLVNVGDDVQVKILNIDKENKKINLSYKQVSGDPWENIEEKYYEGNIVTG 357 Query: 543 SNNAMAE 549 + + + Sbjct: 358 TVEKVLD 364 Score = 199 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 105/405 (25%), Positives = 193/405 (47%), Gaps = 27/405 (6%) Query: 33 KDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRH 92 K V + +P + ++ G+++ + + G+ ++ K Sbjct: 113 KKGYSVLIEGLIGAFLPGS-LSLLSPKDDLPQGEKM-AKVIS---KNGKNIVVSIKDYAE 167 Query: 93 EAWITLEKAYEDAETVTGVINGKVKGGFTVELNG-IRAFLPGSLVDVRPVRDTLHL--EG 149 E YE+ + GV+ G V LN + +P S V G Sbjct: 168 EKISQTFNEYEEGMVIDGVVEDIKNFGAFVRLNDHLNGLIPASEVSWDEKISIKDYLKVG 227 Query: 150 KELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFV 209 ++++ +IKLD+++ + +S + + E+ ++ G V+G V + +G V Sbjct: 228 QKVKALIIKLDREKKRISLSLKRLKENPWKTVDEK----YPIGSIVQGTVTKILPFGFTV 283 Query: 210 DLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWV 268 + G++GL+H T++ W R S++VNVGD++ VK+L D+E +++L KQ+ DPW Sbjct: 284 KIDEGLEGLVHETEIFWGRKGRISDLVNVGDDVQVKILNIDKENKKINLSYKQVSGDPWE 343 Query: 269 AIAKRY-----PEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVN 323 I ++Y +TG V + D G ++I+EG+ G +HVSE+ W S V+N Sbjct: 344 NIEEKYYEGNI-----VTGTVEKVLDNGAIIKIDEGITGFLHVSELSWD-FVDDISTVLN 397 Query: 324 VGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGL 383 ++V ++ ID++ +R+ L +++ K NPW++ ++ GD V+GKI D G + + Sbjct: 398 EKQKIKVKIIKIDKDNKRMRLSVRETKENPWKKASKEIKPGDTVKGKIIRFLDKGAIVLI 457 Query: 384 DG-GIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERE 427 DG ++ + S S N + Y GD+I A VL++ E E Sbjct: 458 DGYEVEAYLPASKASTN--SKSLEETYSIGDQIEAKVLEIGLENE 500 Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats. Identities = 76/337 (22%), Positives = 150/337 (44%), Gaps = 15/337 (4%) Query: 12 SLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ---GELEIQVGDEV 68 S E G ++ GVV I V IPA + + + ++VG +V Sbjct: 171 SQTFNEYEEGMVIDGVVEDIKNFGAFVRLNDHLNGLIPASEVSWDEKISIKDYLKVGQKV 230 Query: 69 DVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GI 127 + ++ LS ++ + W T+++ Y V G + + GFTV+++ G+ Sbjct: 231 KALIIKLDREKKRISLSLKRL-KENPWKTVDEKYPIGSIVQGTVTKILPFGFTVKIDEGL 289 Query: 128 RAFLPGSLVDVRPVRDTLHLE--GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQL 185 + + + L G +++ K++ +D++ + +S + V ++ Sbjct: 290 EGLVHETEIFWGRKGRISDLVNVGDDVQVKILNIDKENKKINLSYKQVSGDPWENIEEK- 348 Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 EG V G V+ + D GA + + G+ G LH+++++W V S ++N +I VK Sbjct: 349 ---YYEGNIVTGTVEKVLDNGAIIKIDEGITGFLHVSELSWDFVDDISTVLNEKQKIKVK 405 Query: 245 VLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEG-VEGL 303 ++K D++ R+ L +++ E+PW +K G + G++ D G V I+ VE Sbjct: 406 IIKIDKDNKRMRLSVRETKENPWKKASKEIKPGDTVKGKIIRFLDKGAIVLIDGYEVEAY 465 Query: 304 VHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERR 340 + S+ +K + ++GD +E VL+I E Sbjct: 466 LPASKASTNSK--SLEETYSIGDQIEAKVLEIGLENE 500 >UniRef50_UPI0001C3232B RNA binding S1 domain protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3232B Length = 529 Score = 323 bits (827), Expect = 2e-86, Method: Composition-based stats. Identities = 154/336 (45%), Positives = 226/336 (67%), Gaps = 5/336 (1%) Query: 18 TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK---NAQGELEIQVGDEVDVALDA 74 G +V G VV IDKD VLVD G KSE IP+ + + + E+++G+EVD + Sbjct: 38 FEEGDVVTGHVVRIDKDEVLVDIGYKSEGVIPSNELSIRKSVDPKDEVEMGEEVDALVLT 97 Query: 75 VEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGS 134 ED G +LS+++A+ +AW +E A E E V G + VKGG ++L G+R FLP S Sbjct: 98 KEDQDGRLILSKKRARFEKAWRRIEAAAESGEPVDGTVIEVVKGGLIIDL-GVRGFLPAS 156 Query: 135 LVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGME 194 LVD+R V G+ +E +VI+L++ RNNVV+SRRAV+E + +R+++L+ LQ GM Sbjct: 157 LVDIRRVPHLDEYLGQTIECRVIELNRSRNNVVLSRRAVLEEQRREDRERILDRLQPGMI 216 Query: 195 VKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTR 254 V+G + N+ D+GAFVDL G+DGL+HI++++W V HPSEI+++GD ++VKVL DR+R R Sbjct: 217 VEGTISNIVDFGAFVDLDGIDGLIHISELSWSHVNHPSEILSIGDTVSVKVLDIDRDRQR 276 Query: 255 VSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNK 314 +SLGLKQ EDPW + Y G +L GRVT + +G FVEI +GVEGLVH+SE+ + Sbjct: 277 ISLGLKQTQEDPWQRVVDTYNVGDELEGRVTKVVTFGAFVEILDGVEGLVHISELAQ-HH 335 Query: 315 NIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCK 350 +P +++ D V+V +L+ID ERRR+SL +K+ + Sbjct: 336 VENPREIIQPNDEVKVKILEIDSERRRLSLSIKRVE 371 Score = 278 bits (712), Expect = 3e-73, Method: Composition-based stats. Identities = 103/347 (29%), Positives = 174/347 (50%), Gaps = 13/347 (3%) Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEI 241 D L +EG V G V + VD+G +G++ +++ ++ P + V +G+E+ Sbjct: 32 DATLTPFEEGDVVTGHVVRIDKDEVLVDIGYKSEGVIPSNELSIRKSVDPKDEVEMGEEV 91 Query: 242 TVKVLKFDRERTRVSLGLKQL-GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV 300 VL + + R+ L K+ E W I G + G V + G +++ GV Sbjct: 92 DALVLTKEDQDGRLILSKKRARFEKAWRRIEAAAESGEPVDGTVIEVVKGGLIIDL--GV 149 Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLG----LKQCKANPWQQ 356 G + S + + H + + G +E V++++ R + L L++ + ++ Sbjct: 150 RGFLPAS-LVDIRRVPHLDEYL--GQTIECRVIELNRSRNNVVLSRRAVLEEQRREDRER 206 Query: 357 FAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIA 416 + G VEG I +I DFG F+ LD GIDGL+H+S++SW+ GD ++ Sbjct: 207 ILDRLQPGMIVEGTISNIVDFGAFVDLD-GIDGLIHISELSWSHVN-HPSEILSIGDTVS 264 Query: 417 AVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEG 476 VL +D +R+RISLG+KQ EDP+ V G + G+VT V GA VE+ DGVEG Sbjct: 265 VKVLDIDRDRQRISLGLKQTQEDPWQRVVDTYNVGDELEGRVTKVVTFGAFVEILDGVEG 324 Query: 477 YLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKD 523 + SE ++ VE+ ++ DEV+ K +D + R +SLS++ + Sbjct: 325 LVHISELAQHHVENPREIIQPNDEVKVKILEIDSERRRLSLSIKRVE 371 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 68/295 (23%), Positives = 127/295 (43%), Gaps = 18/295 (6%) Query: 273 RYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMV 332 + EG +TG V + V+I EG++ +E+ K++ P V +G+ V+ +V Sbjct: 37 PFEEGDVVTGHVVRIDKDEVLVDIGYKSEGVIPSNELS-IRKSVDPKDEVEMGEEVDALV 95 Query: 333 LDIDEERRRISLGLKQCK-ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLV 391 L +++ R+ L K+ + W++ G+ V+G + + G+ I L G+ G + Sbjct: 96 LTKEDQDGRLILSKKRARFEKAWRRIEAAAESGEPVDGTVIEVVKGGLIIDL--GVRGFL 153 Query: 392 HLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWV----AL 447 S + G I V++++ R + L + + E+ Sbjct: 154 PAS-LVDIRRVPHLDEYL--GQTIECRVIELNRSRNNVVLSRRAVLEEQRREDRERILDR 210 Query: 448 NKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTG 507 + G IV G ++ + GA V+L DG++G + SE S V + +LS+GD V K Sbjct: 211 LQPGMIVEGTISNIVDFGAFVDL-DGIDGLIHISELSWSHVNHPSEILSIGDTVSVKVLD 269 Query: 508 VDRKNRAISLSVRAKDEADEKDAIATVNKQEDAN------FSNNAMAEAFKAAKG 556 +DR + ISL ++ E + + T N ++ + A E +G Sbjct: 270 IDRDRQRISLGLKQTQEDPWQRVVDTYNVGDELEGRVTKVVTFGAFVEILDGVEG 324 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 42/182 (23%), Positives = 75/182 (41%), Gaps = 6/182 (3%) Query: 342 ISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVA 401 + L + + +GD V G + I + + + +G++ +++S Sbjct: 19 LLLEIDGQIVPNYDATLTPFEEGDVVTGHVVRIDKDEVLVDIGYKSEGVIPSNELSI-RK 77 Query: 402 GEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLA-EDPFNNWVALNKKGAIVTGKVTA 460 + E + G+E+ A+VL + + R+ L K+ E + A + G V G V Sbjct: 78 SVDPKDEVEMGEEVDALVLTKEDQDGRLILSKKRARFEKAWRRIEAAAESGEPVDGTVIE 137 Query: 461 VDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 V G ++L GV G+L AS RV L G +E + ++R + LS R Sbjct: 138 VVKGGLIIDL--GVRGFLPASLVDIRRVPHLDEYL--GQTIECRVIELNRSRNNVVLSRR 193 Query: 521 AK 522 A Sbjct: 194 AV 195 Score = 62.3 bits (150), Expect = 5e-08, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 43/108 (39%), Gaps = 2/108 (1%) Query: 446 ALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKF 505 ++G +VTG V +D V++ EG + ++E S + D + +G+EV+A Sbjct: 36 TPFEEGDVVTGHVVRIDKDEVLVDIGYKSEGVIPSNELSIRKSVDPKDEVEMGEEVDALV 95 Query: 506 TGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKA 553 + ++ + LS + I E + + E K Sbjct: 96 LTKEDQDGRLILSKKRARFEKAWRRIEAA--AESGEPVDGTVIEVVKG 141 Score = 59.2 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 25/81 (30%), Gaps = 3/81 (3%) Query: 15 EIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE---IQVGDEVDVA 71 G + G V + V+ E + + E IQ DEV V Sbjct: 293 VDTYNVGDELEGRVTKVVTFGAFVEILDGVEGLVHISELAQHHVENPREIIQPNDEVKVK 352 Query: 72 LDAVEDGFGETLLSREKAKRH 92 + ++ LS ++ + Sbjct: 353 ILEIDSERRRLSLSIKRVEGQ 373 >UniRef50_B9L032 30S ribosomal protein S1 n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L032_THERP Length = 443 Score = 319 bits (817), Expect = 2e-85, Method: Composition-based stats. Identities = 130/389 (33%), Positives = 223/389 (57%), Gaps = 14/389 (3%) Query: 3 ESFAQLFEE-SLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE 61 E F +L ++ S R G +V G V+ +D++ +LVD G K E +P+ +F+ E Sbjct: 26 EIFRRLLDDPSYDYRLFRYGDVVEGEVMHVDREKILVDIGGKCEGVVPSREFQTLSPEEL 85 Query: 62 --IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGG 119 ++ GD V V + ED G+ +LS ++A++ + W L++ +E + + KGG Sbjct: 86 GRLRPGDRVLVFVLQPEDQAGQAILSIDRARQEKTWRRLQEVFEAGGVIEAEVVNYNKGG 145 Query: 120 FTVELNGIRAFLPGSLV-------DVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRA 172 V L+GIR F+P S V +V D + G+ L+ K+I++++ RN +++S R Sbjct: 146 LLVNLDGIRGFVPASQVVAIRGGDEVSKQADMARMVGQRLKLKIIEINRHRNRLILSERQ 205 Query: 173 VIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPS 232 ++ + A + QL+E L+EG +G V ++ D+G FVD+GG DGL+H+++++W RVKHPS Sbjct: 206 AVQEQRDAMKAQLIETLREGETRRGRVTSIADFGVFVDIGGADGLVHLSEISWTRVKHPS 265 Query: 233 EIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGC 292 E++ VGDE+ V VL + E+ +++L +++ +PW+ +A ++ G + G +T L +G Sbjct: 266 EVLRVGDEVDVMVLSVNPEQRKIALSIRRTQPEPWMQVASQFQVGQVVRGTITQLASFGA 325 Query: 293 FVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN 352 F ++EGVEGL+HVSE+ + HP++V+ GD V V V+ ID RRRI L L++ Sbjct: 326 FARLQEGVEGLIHVSELA-GWRVEHPNEVLQEGDDVIVRVIRIDPARRRIGLSLRRALEI 384 Query: 353 PWQQFAETHNKGDRVEG---KIKSITDFG 378 ++ T + IT +G Sbjct: 385 SDEELEATLGPEAVAIKQQLIARGITPYG 413 Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats. Identities = 99/401 (24%), Positives = 187/401 (46%), Gaps = 15/401 (3%) Query: 147 LEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYG 206 + G++++ +V Q ++ V A I + + G V+G V ++ Sbjct: 1 MVGQQID-EVHFGRQGLGSIPVMDDAEIFRRLLDDPSYDYRLFRYGDVVEGEVMHVDREK 59 Query: 207 AFVDLGGV-DGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGL-KQLGE 264 VD+GG +G++ + + + GD + V VL+ + + + L + + E Sbjct: 60 ILVDIGGKCEGVVPSREFQTLSPEELG-RLRPGDRVLVFVLQPEDQAGQAILSIDRARQE 118 Query: 265 DPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSE---MDWTNKNIHPSKV 321 W + + + G + V N G V + +G+ G V S+ + ++ + + Sbjct: 119 KTWRRLQEVFEAGGVIEAEVVNYNKGGLLVNL-DGIRGFVPASQVVAIRGGDEVSKQADM 177 Query: 322 VN-VGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETH----NKGDRVEGKIKSITD 376 VG +++ +++I+ R R+ L +Q +G+ G++ SI D Sbjct: 178 ARMVGQRLKLKIIEINRHRNRLILSERQAVQEQRDAMKAQLIETLREGETRRGRVTSIAD 237 Query: 377 FGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQL 436 FG+F+ + GG DGLVHLS+ISW + + GDE+ +VL V+ E+ +I+L +++ Sbjct: 238 FGVFVDI-GGADGLVHLSEISWTRV-KHPSEVLRVGDEVDVMVLSVNPEQRKIALSIRRT 295 Query: 437 AEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLS 496 +P+ + + G +V G +T + + GA L +GVEG + SE + RVE VL Sbjct: 296 QPEPWMQVASQFQVGQVVRGTITQLASFGAFARLQEGVEGLIHVSELAGWRVEHPNEVLQ 355 Query: 497 VGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQ 537 GD+V + +D R I LS+R E +++ AT+ + Sbjct: 356 EGDDVIVRVIRIDPARRRIGLSLRRALEISDEELEATLGPE 396 Score = 174 bits (442), Expect = 6e-42, Method: Composition-based stats. Identities = 65/300 (21%), Positives = 131/300 (43%), Gaps = 18/300 (6%) Query: 260 KQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPS 319 ++L +DP + + G + G V ++ V+I EG+V + + P Sbjct: 29 RRLLDDPSYDY-RLFRYGDVVEGEVMHVDREKILVDIGGKCEGVVP----SREFQTLSPE 83 Query: 320 KV--VNVGDVVEVMVLDIDEERRRISLGLKQC-KANPWQQFAETHNKGDRVEGKIKSITD 376 ++ + GD V V VL +++ + L + + + W++ E G +E ++ + Sbjct: 84 ELGRLRPGDRVLVFVLQPEDQAGQAILSIDRARQEKTWRRLQEVFEAGGVIEAEVVNYNK 143 Query: 377 FGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYK----KGDEIAAVVLQVDAERERISLG 432 G+ + LD GI G V S + G+E ++ G + +++++ R R+ L Sbjct: 144 GGLLVNLD-GIRGFVPASQVVAIRGGDEVSKQADMARMVGQRLKLKIIEINRHRNRLILS 202 Query: 433 VKQLAEDPFNNW----VALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRV 488 +Q ++ + + ++G G+VT++ G V++ G +G + SE S RV Sbjct: 203 ERQAVQEQRDAMKAQLIETLREGETRRGRVTSIADFGVFVDIG-GADGLVHLSEISWTRV 261 Query: 489 EDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMA 548 + + VL VGDEV+ V+ + R I+LS+R + + + +A Sbjct: 262 KHPSEVLRVGDEVDVMVLSVNPEQRKIALSIRRTQPEPWMQVASQFQVGQVVRGTITQLA 321 >UniRef50_A6CB07 30S ribosomal protein S1 n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CB07_9PLAN Length = 572 Score = 318 bits (815), Expect = 3e-85, Method: Composition-based stats. Identities = 132/337 (39%), Positives = 197/337 (58%), Gaps = 10/337 (2%) Query: 20 PGSIVRGVVVAIDKDVVLVDAGLK---SESAIPAEQFKNAQGELEIQVGDEVDVALDAVE 76 G ++GVV +I+ D V +D G K +P QF GE +G EVDV + +V+ Sbjct: 198 EGDRLKGVVESINNDDVFIDLGAKAMGVPGIVPLRQF----GEKTPVIGQEVDVKVTSVK 253 Query: 77 DGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLV 136 + G LS + A A + V V+N KGG V + +R FLP S V Sbjct: 254 EAEGLIQLSLPRGHHKPAGDW--DAVSAGQVVECVVNKSNKGGLEVNVGSLRGFLPASQV 311 Query: 137 DVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVK 196 D+ V D G++L ++ +++ K+ N+VVSRR +ESE + +L E L G E Sbjct: 312 DLYFVGDLEPFVGQKLTVQITEVNPKKRNLVVSRRKYLESEREEIQKELWEKLAIGQEHT 371 Query: 197 GIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVS 256 G VKN+ DYGAFVDLGG+DG LHI +++W R+KHP + ++ +I VK+LK D+E+ R+S Sbjct: 372 GTVKNIKDYGAFVDLGGIDGFLHIGEISWNRIKHPKDALSEHQQINVKILKIDKEKNRIS 431 Query: 257 LGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNI 316 LG+KQL +DPW + RY G+ ++G+VT TD+G F+E+E G+EGL+H+SE+D + Sbjct: 432 LGMKQLQQDPWQSAEDRYATGSTISGKVTRTTDFGAFIELEPGLEGLIHISELDH-RRVK 490 Query: 317 HPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP 353 ++V+ G VL++D R+RISL +K P Sbjct: 491 RVTEVLTTGQETSAKVLEVDPNRKRISLSIKALIDKP 527 Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats. Identities = 96/352 (27%), Positives = 161/352 (45%), Gaps = 22/352 (6%) Query: 187 ENLQEGMEVKGIVKNLTDYGAFVDLG----GVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 E + EG +KG+V+++ + F+DLG GV G++ + K +G E+ Sbjct: 194 EGVGEGDRLKGVVESINNDDVFIDLGAKAMGVPGIVPLRQFGEKTPV-------IGQEVD 246 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 VKV + L L + P G + V G V + + G Sbjct: 247 VKVTSVKEAEGLIQLSLPRGHHKPAGDWDA-VSAGQVVECVVNKSNKGGLEVNVG-SLRG 304 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQF----A 358 + S++ V G + V + +++ ++R + + ++ + ++ Sbjct: 305 FLPASQV-DLYFVGDLEPFV--GQKLTVQITEVNPKKRNLVVSRRKYLESEREEIQKELW 361 Query: 359 ETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAV 418 E G G +K+I D+G F+ L GGIDG +H+ +ISWN + + +I Sbjct: 362 EKLAIGQEHTGTVKNIKDYGAFVDL-GGIDGFLHIGEISWNRI-KHPKDALSEHQQINVK 419 Query: 419 VLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYL 478 +L++D E+ RISLG+KQL +DP+ + G+ ++GKVT GA +EL G+EG + Sbjct: 420 ILKIDKEKNRISLGMKQLQQDPWQSAEDRYATGSTISGKVTRTTDFGAFIELEPGLEGLI 479 Query: 479 RASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDA 530 SE RV+ T VL+ G E AK VD + ISLS++A + E Sbjct: 480 HISELDHRRVKRVTEVLTTGQETSAKVLEVDPNRKRISLSIKALIDKPEAAE 531 Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats. Identities = 52/270 (19%), Positives = 106/270 (39%), Gaps = 21/270 (7%) Query: 276 EGTKLTGRVTNLTDYGCFVEIEE---GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMV 332 EG +L G V ++ + F+++ GV G+V + + +G V+V V Sbjct: 198 EGDRLKGVVESINNDDVFIDLGAKAMGVPGIVPLRQFGEKTPV--------IGQEVDVKV 249 Query: 333 LDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVH 392 + E I L L + P + + G VE + G+ + + G + G + Sbjct: 250 TSVKEAEGLIQLSLPRGHHKP-AGDWDAVSAGQVVECVVNKSNKGGLEVNV-GSLRGFLP 307 Query: 393 LSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNW----VALN 448 S + G+ + + G ++ + +V+ ++ + + ++ E Sbjct: 308 ASQVDLYFVGD--LEPF-VGQKLTVQITEVNPKKRNLVVSRRKYLESEREEIQKELWEKL 364 Query: 449 KKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGV 508 G TG V + GA V+L G++G+L E S +R++ LS ++ K + Sbjct: 365 AIGQEHTGTVKNIKDYGAFVDLG-GIDGFLHIGEISWNRIKHPKDALSEHQQINVKILKI 423 Query: 509 DRKNRAISLSVRAKDEADEKDAIATVNKQE 538 D++ ISL ++ + + A Sbjct: 424 DKEKNRISLGMKQLQQDPWQSAEDRYATGS 453 Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 68/171 (39%), Gaps = 8/171 (4%) Query: 16 IETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA---QGELEIQVGDEVDVAL 72 + G G V I VD G + + + + + +++V + Sbjct: 362 EKLAIGQEHTGTVKNIKDYGAFVDLGG-IDGFLHIGEISWNRIKHPKDALSEHQQINVKI 420 Query: 73 DAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFL 131 ++ L ++ ++ W + E Y T++G + G +EL G+ + Sbjct: 421 LKIDKEKNRISLGMKQLQQDP-WQSAEDRYATGSTISGKVTRTTDFGAFIELEPGLEGLI 479 Query: 132 PGSLVDVRPVRDTLHLE--GKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 S +D R V+ + G+E KV+++D R + +S +A+I+ +A Sbjct: 480 HISELDHRRVKRVTEVLTTGQETSAKVLEVDPNRKRISLSIKALIDKPEAA 530 >UniRef50_A6TRF8 RNA binding S1 domain protein n=2 Tax=Alkaliphilus RepID=A6TRF8_ALKMQ Length = 383 Score = 317 bits (813), Expect = 6e-85, Method: Composition-based stats. Identities = 129/365 (35%), Positives = 213/365 (58%), Gaps = 5/365 (1%) Query: 1 MTESFAQLFEESLKE-IETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ-- 57 M+ +L EE K I + G +V G V+ + + V+ G K++ +P ++ N Sbjct: 1 MSHDMEELMEEIEKSLIRPKRGEVVTGKVIQVSDKGITVNIGYKADGIVPRDEISNDPTI 60 Query: 58 -GELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKV 116 + + DE+ V + +DG G LLS ++ + + W LEK ++ V + V Sbjct: 61 TPQDVAKADDEISVYIIKTDDGEGNVLLSTKRVEHTKGWEDLEKIHDTESLVESKVVESV 120 Query: 117 KGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIES 176 KGG GIR F+P S + R V D GK KVI++D+++N V+SR+ V++ Sbjct: 121 KGGVIAIARGIRCFIPASQLSDRYVDDLKTFVGKSFNAKVIEIDRQKNKAVLSRKEVLQQ 180 Query: 177 ENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVN 236 EN ++ + L++GM+++G VK LT++GAFVD+GG+DGL+HI++++W RVK+PSE+V+ Sbjct: 181 ENKEKKADVFAKLEKGMQIRGEVKRLTNFGAFVDIGGIDGLVHISELSWGRVKNPSEVVS 240 Query: 237 VGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI 296 V D++ VKV+ FD +VSL +KQ +PW IA ++ G L G+V L D+G FVE+ Sbjct: 241 VEDQVEVKVIDFDETTGKVSLSIKQTQPEPWTLIADKFKAGDILEGKVVRLVDFGAFVEL 300 Query: 297 EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQ 356 G++GLVH+S++ + PS+ ++VG V V VLDI+ + +RISL + + + + Sbjct: 301 MPGLDGLVHISQISEAH-IAKPSEELHVGQNVNVKVLDINIDGKRISLSMTAAQEDSTEN 359 Query: 357 FAETH 361 + Sbjct: 360 EPTEY 364 Score = 261 bits (666), Expect = 7e-68, Method: Composition-based stats. Identities = 91/378 (24%), Positives = 165/378 (43%), Gaps = 12/378 (3%) Query: 176 SENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEI 234 E E ++ L + G V G V ++D G V++G DG++ +++ P ++ Sbjct: 6 EELMEEIEKSLIRPKRGEVVTGKVIQVSDKGITVNIGYKADGIVPRDEISNDPTITPQDV 65 Query: 235 VNVGDEITVKVLKFDRERTRVSLGLKQLGEDP-WVAIAKRYPEGTKLTGRVTNLTDYGCF 293 DEI+V ++K D V L K++ W + K + + + +V G Sbjct: 66 AKADDEISVYIIKTDDGEGNVLLSTKRVEHTKGWEDLEKIHDTESLVESKVVESVKGGV- 124 Query: 294 VEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLG----LKQC 349 + I G+ + S++ V G V++ID ++ + L L+Q Sbjct: 125 IAIARGIRCFIPASQLSD-RYVDDLKTFV--GKSFNAKVIEIDRQKNKAVLSRKEVLQQE 181 Query: 350 KANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREY 409 KG ++ G++K +T+FG F+ + GGIDGLVH+S++SW + Sbjct: 182 NKEKKADVFAKLEKGMQIRGEVKRLTNFGAFVDI-GGIDGLVHISELSWGRV-KNPSEVV 239 Query: 410 KKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVE 469 D++ V+ D ++SL +KQ +P+ K G I+ GKV + GA VE Sbjct: 240 SVEDQVEVKVIDFDETTGKVSLSIKQTQPEPWTLIADKFKAGDILEGKVVRLVDFGAFVE 299 Query: 470 LADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKD 529 L G++G + S+ S + + L VG V K ++ + ISLS+ A E ++ Sbjct: 300 LMPGLDGLVHISQISEAHIAKPSEELHVGQNVNVKVLDINIDGKRISLSMTAAQEDSTEN 359 Query: 530 AIATVNKQEDANFSNNAM 547 +++ + + Sbjct: 360 EPTEYTDEDNNVTIGDII 377 Score = 168 bits (427), Expect = 4e-40, Method: Composition-based stats. Identities = 62/282 (21%), Positives = 117/282 (41%), Gaps = 11/282 (3%) Query: 273 RYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMV 332 R G +TG+V ++D G V I +G+V E+ P V D + V + Sbjct: 18 RPKRGEVVTGKVIQVSDKGITVNIGYKADGIVPRDEISNDPTIT-PQDVAKADDEISVYI 76 Query: 333 LDIDEERRRISLGLKQCKANP-WQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLV 391 + D+ + L K+ + W+ + H+ VE K+ G+ I + GI + Sbjct: 77 IKTDDGEGNVLLSTKRVEHTKGWEDLEKIHDTESLVESKVVESVKGGV-IAIARGIRCFI 135 Query: 392 HLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNW----VAL 447 S +S + ++ + G A V+++D ++ + L K++ + A Sbjct: 136 PASQLSDRYVDD--LKTF-VGKSFNAKVIEIDRQKNKAVLSRKEVLQQENKEKKADVFAK 192 Query: 448 NKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTG 507 +KG + G+V + GA V++ G++G + SE S RV++ + V+SV D+VE K Sbjct: 193 LEKGMQIRGEVKRLTNFGAFVDIG-GIDGLVHISELSWGRVKNPSEVVSVEDQVEVKVID 251 Query: 508 VDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAE 549 D +SLS++ + + + Sbjct: 252 FDETTGKVSLSIKQTQPEPWTLIADKFKAGDILEGKVVRLVD 293 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 32/189 (16%), Positives = 68/189 (35%), Gaps = 11/189 (5%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQGELEIQVGDEVDVALD 73 + G +RG V + VD G + + + + V D+V+V + Sbjct: 192 KLEKGMQIRGEVKRLTNFGAFVDIGG-IDGLVHISELSWGRVKNPSEVVSVEDQVEVKVI 250 Query: 74 AVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFLP 132 ++ G+ LS ++ + W + ++ + + G + V G VEL G+ + Sbjct: 251 DFDETTGKVSLSIKQTQPEP-WTLIADKFKAGDILEGKVVRLVDFGAFVELMPGLDGLVH 309 Query: 133 GSLVDVRPVRDTLH--LEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLL---E 187 S + + G+ + KV+ ++ + +S A E E + Sbjct: 310 ISQISEAHIAKPSEELHVGQNVNVKVLDINIDGKRISLSMTAAQEDSTENEPTEYTDEDN 369 Query: 188 NLQEGMEVK 196 N+ G + Sbjct: 370 NVTIGDIID 378 Score = 60.4 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 37/111 (33%), Gaps = 4/111 (3%) Query: 12 SLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ---GELEIQVGDEV 68 +L + + G I+ G VV + V+ + + Q A E+ VG V Sbjct: 272 TLIADKFKAGDILEGKVVRLVDFGAFVELMPGLDGLVHISQISEAHIAKPSEELHVGQNV 331 Query: 69 DVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVT-GVINGKVKG 118 +V + + LS A+ + ++ VT G I Sbjct: 332 NVKVLDINIDGKRISLSMTAAQEDSTENEPTEYTDEDNNVTIGDIIDMNDK 382 >UniRef50_D1C7V0 RNA binding S1 domain protein n=2 Tax=Chloroflexi RepID=D1C7V0_SPHTD Length = 459 Score = 317 bits (812), Expect = 9e-85, Method: Composition-based stats. Identities = 127/357 (35%), Positives = 209/357 (58%), Gaps = 11/357 (3%) Query: 5 FAQLFEE-SLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL--E 61 QL + S G ++ G ++ +D+D +LVD G KSE IPA +F E Sbjct: 31 MEQLLSDPSHDYRVLNYGDVIEGQIMHVDRDELLVDIGSKSEGIIPAREFSTLTDEERAA 90 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 + VGD V V + E+ G+ +LS ++A++ ++W L++ YE E + + KGG Sbjct: 91 LSVGDHVLVFVVQAENQEGQAVLSIDRARQEKSWRRLQEIYEAGEIIEAEVTNYNKGGLL 150 Query: 122 VELNGIRAFLPGSLV-------DVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVI 174 V L+G+R F+P S V D D L G +L K+I++++ RN +++S R I Sbjct: 151 VNLDGVRGFVPASQVTEIRGGDDSSKQADMARLIGSKLSLKIIEINRHRNRLILSERQAI 210 Query: 175 ESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEI 234 + +++L+E L EG +G V ++TD+GAFVD+GG DGL+H+++++W RVKHPSE+ Sbjct: 211 QERRDVMKERLIEELTEGETRRGRVTSITDFGAFVDIGGADGLVHLSELSWSRVKHPSEV 270 Query: 235 VNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFV 294 + VG+E+ V VL + E +++L +K+ +PW +A +Y G + G VT L ++G F Sbjct: 271 LKVGEEVDVYVLGINAEEKKIALSIKRTQPEPWSRVAMKYEVGQLVLGTVTQLANFGAFA 330 Query: 295 EIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKA 351 IE+G+EGL+HVSE+ + HP +VV+ G + + ++ ID RRR+ L L++ Sbjct: 331 RIEDGIEGLIHVSELS-EQRIGHPRQVVSEGQDLILRIIRIDPARRRMGLSLRRALE 386 Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats. Identities = 93/375 (24%), Positives = 176/375 (46%), Gaps = 14/375 (3%) Query: 173 VIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHP 231 + + ++ L G ++G + ++ VD+G +G++ + + Sbjct: 29 SLMEQLLSDPSHDYRVLNYGDVIEGQIMHVDRDELLVDIGSKSEGIIPAREFS-TLTDEE 87 Query: 232 SEIVNVGDEITVKVLKFDRERTRVSLGL-KQLGEDPWVAIAKRYPEGTKLTGRVTNLTDY 290 ++VGD + V V++ + + + L + + E W + + Y G + VTN Sbjct: 88 RAALSVGDHVLVFVVQAENQEGQAVLSIDRARQEKSWRRLQEIYEAGEIIEAEVTNYNKG 147 Query: 291 GCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVN----VGDVVEVMVLDIDEERRRISLGL 346 G V + +GV G V S++ SK + +G + + +++I+ R R+ L Sbjct: 148 GLLVNL-DGVRGFVPASQVTEIRGGDDSSKQADMARLIGSKLSLKIIEINRHRNRLILSE 206 Query: 347 KQCKANPWQQFAETH----NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAG 402 +Q E +G+ G++ SITDFG F+ + GG DGLVHLS++SW+ Sbjct: 207 RQAIQERRDVMKERLIEELTEGETRRGRVTSITDFGAFVDI-GGADGLVHLSELSWSRV- 264 Query: 403 EEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVD 462 + K G+E+ VL ++AE ++I+L +K+ +P++ + G +V G VT + Sbjct: 265 KHPSEVLKVGEEVDVYVLGINAEEKKIALSIKRTQPEPWSRVAMKYEVGQLVLGTVTQLA 324 Query: 463 AKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAK 522 GA + DG+EG + SE S R+ V+S G ++ + +D R + LS+R Sbjct: 325 NFGAFARIEDGIEGLIHVSELSEQRIGHPRQVVSEGQDLILRIIRIDPARRRMGLSLRRA 384 Query: 523 DEADEKDAIATVNKQ 537 EA + + A++ + Sbjct: 385 LEATDDEVAASLGPE 399 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 58/303 (19%), Positives = 131/303 (43%), Gaps = 13/303 (4%) Query: 256 SLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKN 315 S+ L + + G + G++ ++ V+I EG++ E Sbjct: 27 SVSLMEQLLSDPSHDYRVLNYGDVIEGQIMHVDRDELLVDIGSKSEGIIPAREFSTLTDE 86 Query: 316 IHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC-KANPWQQFAETHNKGDRVEGKIKSI 374 ++VGD V V V+ + + + L + + + W++ E + G+ +E ++ + Sbjct: 87 ERA--ALSVGDHVLVFVVQAENQEGQAVLSIDRARQEKSWRRLQEIYEAGEIIEAEVTNY 144 Query: 375 TDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYK----KGDEIAAVVLQVDAERERIS 430 G+ + LD G+ G V S ++ G+++ ++ G +++ +++++ R R+ Sbjct: 145 NKGGLLVNLD-GVRGFVPASQVTEIRGGDDSSKQADMARLIGSKLSLKIIEINRHRNRLI 203 Query: 431 LGVKQLAEDPFNNWVALNKK----GAIVTGKVTAVDAKGATVELADGVEGYLRASEASRD 486 L +Q ++ + + G G+VT++ GA V++ G +G + SE S Sbjct: 204 LSERQAIQERRDVMKERLIEELTEGETRRGRVTSITDFGAFVDIG-GADGLVHLSELSWS 262 Query: 487 RVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNA 546 RV+ + VL VG+EV+ G++ + + I+LS++ + + Sbjct: 263 RVKHPSEVLKVGEEVDVYVLGINAEEKKIALSIKRTQPEPWSRVAMKYEVGQLVLGTVTQ 322 Query: 547 MAE 549 +A Sbjct: 323 LAN 325 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 71/176 (40%), Gaps = 8/176 (4%) Query: 16 IETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA---QGELEIQVGDEVDVAL 72 E G RG V +I VD G ++ + + + ++VG+EVDV + Sbjct: 223 EELTEGETRRGRVTSITDFGAFVDIGG-ADGLVHLSELSWSRVKHPSEVLKVGEEVDVYV 281 Query: 73 DAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL-NGIRAFL 131 + + LS ++ + W + YE + V G + G + +GI + Sbjct: 282 LGINAEEKKIALSIKRTQPEP-WSRVAMKYEVGQLVLGTVTQLANFGAFARIEDGIEGLI 340 Query: 132 PGSLVDVRPVRDTLHLE--GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQL 185 S + + + + G++L ++I++D R + +S R +E+ + L Sbjct: 341 HVSELSEQRIGHPRQVVSEGQDLILRIIRIDPARRRMGLSLRRALEATDDEVAASL 396 >UniRef50_C1DT56 Ribosomal protein S01 n=3 Tax=Sulfurihydrogenibium RepID=C1DT56_SULAA Length = 573 Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats. Identities = 147/528 (27%), Positives = 270/528 (51%), Gaps = 20/528 (3%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE 61 F +L EES + ++G VV + +D V VD G K E+ + + + + Sbjct: 1 MNEFEKLMEESKESGFYSKNQKIKGKVVKVTEDKVFVDIGQKIEAVLNRNE------DQD 54 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 ++ G E++ D G +LSR E L+ A+E+ + V I K G+T Sbjct: 55 VEEGQEIEAVFTGKRDKDGYFILSRRGIVNKEKLQKLKDAFENKKKVKATILSKQDKGYT 114 Query: 122 VELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKR--NNVVVSRRAVIESENS 179 V + G R F+P S ++ + G E ++K +++ N+V+SR+ + E Sbjct: 115 VSVEGFRGFMPLSESSLKRDENLPE--GFTFEAYIVKFEERGRNPNIVISRKQALIEEKE 172 Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSEIVNVG 238 E++++L L+EG +VK V + GA + + V G L ++++W + + E++ VG Sbjct: 173 LEKEKILSLLKEGQKVKAKVVKVQPNGAVLSIEDVLYGFLPKSEISWDKSRKVEEVLKVG 232 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE 298 DE+ V V + + + L LK L +PW K G + ++ ++ G V++ Sbjct: 233 DEVEVVVKEI--KDKKPILSLKLLEGNPWDKFDKNI--GDVVEVKIKDINKGGLVVDLGL 288 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFA 358 +EG + SE+ + K + VGD V + +ID+E+ ++ L +KQ + NP ++F Sbjct: 289 -LEGFIPNSEISHFDYV-KAKKNLKVGDTVVAKIFEIDKEKGKVKLSIKQAQENPLEKFL 346 Query: 359 ETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAV 418 + + G ++ K+K + F+ L I+G+V L D++ N + + K+ Sbjct: 347 KENPVGSVIQAKVKDVKQKVAFVDLGD-IEGIVKLQDVTDNPSIKSISSLLKEDKTYRFK 405 Query: 419 VLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYL 478 VL + E++++ LG+KQL +D FN++V+ +K G +V GKV + KGA V++ D +EG++ Sbjct: 406 VLGI--EKDKVVLGIKQLLDDAFNDFVSKHKVGDVVKGKVKKLIEKGAFVDITDEIEGFI 463 Query: 479 RASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEAD 526 SE S++R++ + LS+ EVEAK +D +N+ I+LS++ Sbjct: 464 PVSEISKERIKIPSDKLSLHQEVEAKIIKIDTQNKKITLSIKQLILDQ 511 >UniRef50_A6DP56 30S ribosomal protein S1 n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DP56_9BACT Length = 463 Score = 316 bits (809), Expect = 2e-84, Method: Composition-based stats. Identities = 144/436 (33%), Positives = 235/436 (53%), Gaps = 27/436 (6%) Query: 3 ESFAQLFEESLKE--IETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL 60 E FA LFEE+ + IE + G V+G + IDK + VD G + E IP + + +GEL Sbjct: 12 EDFASLFEENSRSMKIEFKSGEAVKGKITLIDKSSIFVDFGARCEGIIPLGEVLDNKGEL 71 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 E++VGDE++ + D GE L K T E AY + V G + + KGG+ Sbjct: 72 ELKVGDEIEAWVL--NDRGGEISL-TVKLSGDALNETFEAAYSEKIPVEGKVIEERKGGY 128 Query: 121 TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 TV L+G AF P S +D RP D G+ F + K+D + V SRR ++ Sbjct: 129 TVNLSGNMAFCPYSQMDSRPG-DASLYLGQTFSFLITKIDDRGAVV--SRRDYLKILAEK 185 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 +R++L E L EG E++G+++ + +G FVDLGGVDGL+ ++++WKR +E V+VGD+ Sbjct: 186 QREKLQEELVEGDEIEGVIRRIERFGFFVDLGGVDGLVPASEVSWKRNVDLNEFVSVGDQ 245 Query: 241 ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV 300 ++ K+L D E+ R++L L+ +DPW + G +V+++ D+G FVE+ EGV Sbjct: 246 VSCKILALDWEKGRITLSLRACLQDPWD--SDELFNGATFEAKVSSVQDFGAFVELIEGV 303 Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAET 360 +GL+H+S+ +G+ ++V + +D ++ RISL L + + Sbjct: 304 DGLLHISQFKGIQP--------QIGETLKVKIDSVDFDQHRISLSLHKGEVGEAV----E 351 Query: 361 HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDIS---WNVAGEEAVREYKKGDEIAA 417 + + G +++I +G+F+GL G GL+H+S + A + + Y KG E Sbjct: 352 IVEAKELTGTVENIKPYGVFMGLSDGRSGLLHVSQLDVPKSGDATKTLEKNYAKGSEHKI 411 Query: 418 VVLQVDAERERISLGV 433 +L+V E +ISL + Sbjct: 412 EILKV--EAGKISLCL 425 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 108/461 (23%), Positives = 187/461 (40%), Gaps = 38/461 (8%) Query: 102 YEDAETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLD 160 ++ E V G I K V+ +P V G E+E V+ + Sbjct: 29 FKSGEAVKGKITLIDKSSIFVDFGARCEGIIPLGEVLDNKGE-LELKVGDEIEAWVL--N 85 Query: 161 QKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHI 220 + + ++ + ++ N E + V+G V G V+L G Sbjct: 86 DRGGEISLTVKLSGDALNETFEAAYSEKIP----VEGKVIEERKGGYTVNLSGNMAFCPY 141 Query: 221 TDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLG--LKQLGEDPWVAIAKRYPEGT 278 + M R S + G + + K D VS LK L E + + EG Sbjct: 142 SQM-DSRPGDASLYL--GQTFSFLITKIDDRGAVVSRRDYLKILAEKQREKLQEELVEGD 198 Query: 279 KLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEE 338 ++ G + + +G FV++ GV+GLV SE+ W +N+ ++ V+VGD V +L +D E Sbjct: 199 EIEGVIRRIERFGFFVDLG-GVDGLVPASEVSW-KRNVDLNEFVSVGDQVSCKILALDWE 256 Query: 339 RRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISW 398 + RI+L L+ C +PW + G E K+ S+ DFG F+ L G+DGL+H+S Sbjct: 257 KGRITLSLRACLQDPWDSDELFN--GATFEAKVSSVQDFGAFVELIEGVDGLLHISQFKG 314 Query: 399 NVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKV 458 + G+ + + VD ++ RISL + + V +TG V Sbjct: 315 IQP--------QIGETLKVKIDSVDFDQHRISLSLHKGEVGEAVEIVEA----KELTGTV 362 Query: 459 TAVDAKGATVELADGVEGYLRASEA----SRDRVEDATLVLSVGDEVEAKFTGVDRKNRA 514 + G + L+DG G L S+ S D + + G E + + V + Sbjct: 363 ENIKPYGVFMGLSDGRSGLLHVSQLDVPKSGDATKTLEKNYAKGSEHKIEILKV--EAGK 420 Query: 515 ISLSV--RAKDEADEKDAIATVNKQEDANFSNNAMAEAFKA 553 ISL + +A + + ++K+ ++ S ++ F Sbjct: 421 ISLCLPGKAAAAENTSKLLNDLHKKSNS-GSFGSLGGMFDG 460 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 90/366 (24%), Positives = 157/366 (42%), Gaps = 32/366 (8%) Query: 172 AVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKH 230 ++ E + + + + G VKG + + FVD G +G++ + ++ Sbjct: 16 SLFEENSRSMKIEFKS----GEAVKGKITLIDKSSIFVDFGARCEGIIPLGEVLD---NK 68 Query: 231 PSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDY 290 + VGDEI VL + +SL +K G+ Y E + G+V Sbjct: 69 GELELKVGDEIEAWVL--NDRGGEISLTVKLSGDALNETFEAAYSEKIPVEGKVIEERKG 126 Query: 291 GCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLG----L 346 G V + G S+MD + + +G ++ ID R + L Sbjct: 127 GYTVNLS-GNMAFCPYSQMDSRPGDAS----LYLGQTFSFLITKID--DRGAVVSRRDYL 179 Query: 347 KQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAV 406 K ++ E +GD +EG I+ I FG F+ L GG+DGLV S++SW + Sbjct: 180 KILAEKQREKLQEELVEGDEIEGVIRRIERFGFFVDL-GGVDGLVPASEVSWKR-NVDLN 237 Query: 407 REYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGA 466 GD+++ +L +D E+ RI+L ++ +DP+++ GA KV++V GA Sbjct: 238 EFVSVGDQVSCKILALDWEKGRITLSLRACLQDPWDS--DELFNGATFEAKVSSVQDFGA 295 Query: 467 TVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEAD 526 VEL +GV+G L S+ + +G+ ++ K VD ISLS+ + + Sbjct: 296 FVELIEGVDGLLHISQFKGIQP-------QIGETLKVKIDSVDFDQHRISLSLHKGEVGE 348 Query: 527 EKDAIA 532 + + Sbjct: 349 AVEIVE 354 >UniRef50_Q1D6H1 Ribosomal protein S1 family protein n=2 Tax=Cystobacterineae RepID=Q1D6H1_MYXXD Length = 548 Score = 314 bits (806), Expect = 4e-84, Method: Composition-based stats. Identities = 149/502 (29%), Positives = 238/502 (47%), Gaps = 44/502 (8%) Query: 3 ESFAQLFEESLKE------IETRPGSIVRGVVVAIDKDVVLVDAGL--KSESAIPAEQFK 54 +SFA++FE KE R G VRG + + D V KSE+ I + K Sbjct: 51 QSFAEMFEAQAKEGGTPSRKGLRVGEKVRGTIFQLGADTAFVSVEGAAKSEAMIELRELK 110 Query: 55 NAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVING 114 + +G L VGD +D + V G LLSR AK L +A V G++ Sbjct: 111 DDEGILRFGVGDTIDAHVVEV--GAKGILLSRALAKGSANLALLAEARASGMPVEGLVLS 168 Query: 115 KVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVI 174 KGG V + IRAF P S +D+R V G++L+F+V ++ ++ NVV+SRR+++ Sbjct: 169 VNKGGVEVAIGDIRAFCPISQLDLRYVEKPDQFIGEKLQFRVSEVRER--NVVLSRRSLL 226 Query: 175 ESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEI 234 E E + +NL +G VKG V + D+G FVDLGGV+G++ ++++++ RV HPS++ Sbjct: 227 EDEQRQLAAETRKNLAQGKIVKGKVTGVRDFGVFVDLGGVEGMIPVSELSYTRVGHPSDV 286 Query: 235 VNVGDEITVKVL----------KFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRV 284 V VGD++ V++L +++ R++L ++ EDP+ EG +L G+V Sbjct: 287 VKVGDDVEVEILRMEAGQPNSPDKSKQKERITLSMRSRQEDPFQKALSEIKEGDRLQGKV 346 Query: 285 TNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISL 344 L +G FVE+ GV+GLVH+S + + HP VV G+ + V V ID + +RI L Sbjct: 347 VRLQQFGAFVELRPGVDGLVHISALSD-RRIAHPRDVVKEGETIWVSVEKIDTQEKRIGL 405 Query: 345 ---GLKQCKANPWQQFAETHNKGDRVEGKIK-------------SITDFGIFIGLDGGID 388 ++ + P ++ A + I +G+F+ GG Sbjct: 406 RRISEEEAQRPPEERTAPAAEAAAPAQPATPRPKVGQVVVGKVDRIEPYGVFLAFPGG-K 464 Query: 389 GLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALN 448 GL+ S+ + G + + Y G E+ +L +DA +I L V V Sbjct: 465 GLLPASE-TGTERGTDLRKHYSLGQEVKVAILDIDA-SGKIRLSVTAAIRAEERAEVEAW 522 Query: 449 KKGAIVTGKVTAVDAKGATVEL 470 +K G G +L Sbjct: 523 QKTQQPQG--AGKKGFGTFADL 542 Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats. Identities = 119/521 (22%), Positives = 209/521 (40%), Gaps = 52/521 (9%) Query: 73 DAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGI---RA 129 E ++ +A+ E K E V G I V + G A Sbjct: 43 LYEEVPEAQSFAEMFEAQAKEGGTPSRKGLRVGEKVRGTIFQLGADTAFVSVEGAAKSEA 102 Query: 130 FLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENL 189 + + G ++ V+++ ++ RA+ + + E Sbjct: 103 MIELRELKDDEGI-LRFGVGDTIDAHVVEV---GAKGILLSRALAKGSANLALLA--EAR 156 Query: 190 QEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFD 249 GM V+G+V ++ G V +G + I+ + + V+ P + +G+++ +V + Sbjct: 157 ASGMPVEGLVLSVNKGGVEVAIGDIRAFCPISQLDLRYVEKPDQF--IGEKLQFRVSEVR 214 Query: 250 RERTRVSLGLKQLGEDPWVAIA----KRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVH 305 V L + L ED +A K +G + G+VT + D+G FV++ GVEG++ Sbjct: 215 ERN--VVLSRRSLLEDEQRQLAAETRKNLAQGKIVKGKVTGVRDFGVFVDLG-GVEGMIP 271 Query: 306 VSEMDWTNKNIHPSKVVNVGDVVEVMVLDID----------EERRRISLGLKQCKANPWQ 355 VSE+ +T + HPS VV VGD VEV +L ++ +++ RI+L ++ + +P+Q Sbjct: 272 VSELSYT-RVGHPSDVVKVGDDVEVEILRMEAGQPNSPDKSKQKERITLSMRSRQEDPFQ 330 Query: 356 QFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEI 415 + +GDR++GK+ + FG F+ L G+DGLVH+S +S K+G+ I Sbjct: 331 KALSEIKEGDRLQGKVVRLQQFGAFVELRPGVDGLVHISALSDRRIA-HPRDVVKEGETI 389 Query: 416 AAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVT---------------- 459 V ++D + +RI L E Sbjct: 390 WVSVEKIDTQEKRIGLRRISEEEAQRPPEERTAPAAEAAAPAQPATPRPKVGQVVVGKVD 449 Query: 460 AVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSV 519 ++ G + G G L ASE +R D S+G EV+ +D + I LSV Sbjct: 450 RIEPYGVFLAFPGGK-GLLPASETGTERGTDLRKHYSLGQEVKVAILDIDA-SGKIRLSV 507 Query: 520 RAKDEADEKDAIATVNKQE----DANFSNNAMAEAFKAAKG 556 A A+E+ + K + A+ A+ Sbjct: 508 TAAIRAEERAEVEAWQKTQQPQGAGKKGFGTFADLLSKARK 548 >UniRef50_Q0AXA2 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AXA2_SYNWW Length = 687 Score = 312 bits (800), Expect = 2e-83, Method: Composition-based stats. Identities = 131/371 (35%), Positives = 215/371 (57%), Gaps = 9/371 (2%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE-- 59 ESFA+L E G +++G V+ + D V+VD G KSE IP + + Sbjct: 317 EESFAKLEAEMADFTTPNKGDVIKGKVIQVLDDEVMVDVGGKSEGIIPLREMSLQDIDSA 376 Query: 60 -LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 ++VGDE++V + +D G LLS++K LE+++++ + +TG + G VKG Sbjct: 377 KELVEVGDEIEVMVLKWDD-DGTILLSKKKVDAKILLDELEESFKEGKVITGTVTGSVKG 435 Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNN---VVVSRRAVIE 175 G V++ GI AFLP S V+ V++ +EL FK+I+ ++ + VV+SR+ ++ Sbjct: 436 GLLVDV-GIVAFLPASHVEDGYVKNLDEYINRELSFKIIEFNRNKRRGSQVVLSRKELVA 494 Query: 176 SENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIV 235 E + ++ Q E ++EG KG +K L DYGAF+DLGG +GLLH++++A R+ PS+++ Sbjct: 495 EEKAKQKKQFWEEIEEGQVRKGRIKRLVDYGAFIDLGGYEGLLHVSEIAHTRIDQPSDVL 554 Query: 236 NVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVE 295 G+EI V +L DRE+ RVSL K+L + PW + +++ EG + G V + +G FVE Sbjct: 555 QEGEEIDVYILALDREKERVSLSRKKLLKSPWEIVMEKFQEGDIIEGTVVRIAPFGAFVE 614 Query: 296 IEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQ 355 IE GV+GLVH+S++ ++ P VV V + +++ +L ID E +RI L LK+ Sbjct: 615 IEAGVDGLVHISQLA-NHRVEKPEDVVQVNEKIKIKILSIDPEEKRIGLSLKEALNEMEN 673 Query: 356 QFAETHNKGDR 366 Q + + + Sbjct: 674 QEVQDYMEKQE 684 Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats. Identities = 98/375 (26%), Positives = 186/375 (49%), Gaps = 17/375 (4%) Query: 177 ENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSEIV 235 +G +KG V + D VD+GG +G++ + +M+ + + E+V Sbjct: 321 AKLEAEMADFTTPNKGDVIKGKVIQVLDDEVMVDVGGKSEGIIPLREMSLQDIDSAKELV 380 Query: 236 NVGDEITVKVLKFDRERTRVSLGLKQLG-EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFV 294 VGDEI V VLK+D + + L K++ + + + + EG +TG VT G V Sbjct: 381 EVGDEIEVMVLKWD-DDGTILLSKKKVDAKILLDELEESFKEGKVITGTVTGSVKGGLLV 439 Query: 295 EIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRR---ISLGLKQC-- 349 ++ G+ + S ++ + + +N + +++ + +RR + L K+ Sbjct: 440 DV--GIVAFLPASHVEDGY-VKNLDEYINR--ELSFKIIEFNRNKRRGSQVVLSRKELVA 494 Query: 350 --KANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVR 407 KA +QF E +G +G+IK + D+G FI L GG +GL+H+S+I+ ++ Sbjct: 495 EEKAKQKKQFWEEIEEGQVRKGRIKRLVDYGAFIDL-GGYEGLLHVSEIAHTRI-DQPSD 552 Query: 408 EYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGAT 467 ++G+EI +L +D E+ER+SL K+L + P+ + ++G I+ G V + GA Sbjct: 553 VLQEGEEIDVYILALDREKERVSLSRKKLLKSPWEIVMEKFQEGDIIEGTVVRIAPFGAF 612 Query: 468 VELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADE 527 VE+ GV+G + S+ + RVE V+ V ++++ K +D + + I LS++ E Sbjct: 613 VEIEAGVDGLVHISQLANHRVEKPEDVVQVNEKIKIKILSIDPEEKRIGLSLKEALNEME 672 Query: 528 KDAIATVNKQEDANF 542 + ++++ N Sbjct: 673 NQEVQDYMEKQEENE 687 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 56/280 (20%), Positives = 117/280 (41%), Gaps = 16/280 (5%) Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDID 336 G + G+V + D V++ EG++ + EM + ++V VGD +EVMVL D Sbjct: 336 GDVIKGKVIQVLDDEVMVDVGGKSEGIIPLREMSLQD-IDSAKELVEVGDEIEVMVLKWD 394 Query: 337 EERRRISLGLKQCKANPWQQF-AETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSD 395 + I L K+ A E+ +G + G + G+ + + GI + S Sbjct: 395 -DDGTILLSKKKVDAKILLDELEESFKEGKVITGTVTGSVKGGLLVDV--GIVAFLPASH 451 Query: 396 ISWNVAGEEAVREYKKGDEIAAVVLQVDAERER---ISLGVKQ----LAEDPFNNWVALN 448 + + E++ +++ + + R + L K+ + Sbjct: 452 VEDGYV-KNLDEY--INRELSFKIIEFNRNKRRGSQVVLSRKELVAEEKAKQKKQFWEEI 508 Query: 449 KKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGV 508 ++G + G++ + GA ++L G EG L SE + R++ + VL G+E++ + Sbjct: 509 EEGQVRKGRIKRLVDYGAFIDLG-GYEGLLHVSEIAHTRIDQPSDVLQEGEEIDVYILAL 567 Query: 509 DRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMA 548 DR+ +SLS + ++ + + + + + +A Sbjct: 568 DREKERVSLSRKKLLKSPWEIVMEKFQEGDIIEGTVVRIA 607 >UniRef50_A9AV75 RNA binding S1 domain protein n=5 Tax=Chloroflexi (class) RepID=A9AV75_HERA2 Length = 415 Score = 311 bits (796), Expect = 6e-83, Method: Composition-based stats. Identities = 130/357 (36%), Positives = 210/357 (58%), Gaps = 15/357 (4%) Query: 3 ESFAQLFEESLKE-----IETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN-- 55 + L EE L++ + G V G +V +D+D VLVD G KSE +P + + Sbjct: 31 DDDRALLEEYLRDPAHDYRNLKYGDSVDGTIVRVDRDEVLVDIGSKSEGVVPGREMTSLS 90 Query: 56 AQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGK 115 ++ E++VGD + V + ED G +LS +KA++ ++W L+ +E + + + Sbjct: 91 SEERAELKVGDVLLVTVVQTEDAEGRIVLSIDKARQEKSWRALQVNHEAGDVIHAAVTNY 150 Query: 116 VKGGFTVELNGIRAFLPGSLV-------DVRPVRDTLHLEGKELEFKVIKLDQKRNNVVV 168 KGG V L+G+R F+P S V DV+ D L G+ L K+I++++ RN +++ Sbjct: 151 NKGGLLVNLSGVRGFVPSSQVSSVSRGSDVQKQSDMAKLVGQTLPLKIIEINRSRNRLIL 210 Query: 169 SRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRV 228 S R ++ + +DQLLE L+ G G V +L D+GAFVD+GG DGL+H+++++W RV Sbjct: 211 SERQAVQEVRDSRKDQLLEKLEPGAVRTGRVTSLCDFGAFVDIGGADGLVHLSELSWSRV 270 Query: 229 KHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLT 288 KHP E++ VGD ++V +L D ++ R++L +K+ +PW + RY G ++G VT LT Sbjct: 271 KHPEEVLKVGDAVSVYILSVDEDKKRIALSIKRTQAEPWTTVTDRYQIGQSVSGVVTQLT 330 Query: 289 DYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLG 345 +G FV +E+G+EGL+H+SEM + HP V+N GD V ++ ID R+RI L Sbjct: 331 AFGAFVRLEDGIEGLIHISEMSDE-RIQHPRDVINEGDSVSARIIRIDPTRKRIGLS 386 Score = 264 bits (674), Expect = 8e-69, Method: Composition-based stats. Identities = 100/360 (27%), Positives = 173/360 (48%), Gaps = 14/360 (3%) Query: 171 RAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVK 229 + E + NL+ G V G + + VD+G +G++ +M + Sbjct: 33 DRALLEEYLRDPAHDYRNLKYGDSVDGTIVRVDRDEVLVDIGSKSEGVVPGREMTSLSSE 92 Query: 230 HPSEIVNVGDEITVKVLKFDRERTRVSLGL-KQLGEDPWVAIAKRYPEGTKLTGRVTNLT 288 +E + VGD + V V++ + R+ L + K E W A+ + G + VTN Sbjct: 93 ERAE-LKVGDVLLVTVVQTEDAEGRIVLSIDKARQEKSWRALQVNHEAGDVIHAAVTNYN 151 Query: 289 DYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVN----VGDVVEVMVLDIDEERRRISL 344 G V + GV G V S++ ++ K + VG + + +++I+ R R+ L Sbjct: 152 KGGLLVNLS-GVRGFVPSSQVSSVSRGSDVQKQSDMAKLVGQTLPLKIIEINRSRNRLIL 210 Query: 345 G----LKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNV 400 +++ + + Q E G G++ S+ DFG F+ + GG DGLVHLS++SW+ Sbjct: 211 SERQAVQEVRDSRKDQLLEKLEPGAVRTGRVTSLCDFGAFVDI-GGADGLVHLSELSWSR 269 Query: 401 AGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTA 460 + K GD ++ +L VD +++RI+L +K+ +P+ + G V+G VT Sbjct: 270 V-KHPEEVLKVGDAVSVYILSVDEDKKRIALSIKRTQAEPWTTVTDRYQIGQSVSGVVTQ 328 Query: 461 VDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 + A GA V L DG+EG + SE S +R++ V++ GD V A+ +D + I LS R Sbjct: 329 LTAFGAFVRLEDGIEGLIHISEMSDERIQHPRDVINEGDSVSARIIRIDPTRKRIGLSTR 388 Score = 171 bits (434), Expect = 6e-41, Method: Composition-based stats. Identities = 62/285 (21%), Positives = 117/285 (41%), Gaps = 13/285 (4%) Query: 272 KRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVM 331 + G + G + + V+I EG+V EM + + VGDV+ V Sbjct: 49 RNLKYGDSVDGTIVRVDRDEVLVDIGSKSEGVVPGREMTSLSSEERAE--LKVGDVLLVT 106 Query: 332 VLDIDEERRRISLGLKQC-KANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGL 390 V+ ++ RI L + + + W+ H GD + + + G+ + L G+ G Sbjct: 107 VVQTEDAEGRIVLSIDKARQEKSWRALQVNHEAGDVIHAAVTNYNKGGLLVNLS-GVRGF 165 Query: 391 VHLSDISWNVAGEEAVREYK----KGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVA 446 V S +S G + ++ G + +++++ R R+ L +Q ++ ++ Sbjct: 166 VPSSQVSSVSRGSDVQKQSDMAKLVGQTLPLKIIEINRSRNRLILSERQAVQEVRDSRKD 225 Query: 447 LN----KKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVE 502 + GA+ TG+VT++ GA V++ G +G + SE S RV+ VL VGD V Sbjct: 226 QLLEKLEPGAVRTGRVTSLCDFGAFVDIG-GADGLVHLSELSWSRVKHPEEVLKVGDAVS 284 Query: 503 AKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAM 547 VD + I+LS++ + + + Sbjct: 285 VYILSVDEDKKRIALSIKRTQAEPWTTVTDRYQIGQSVSGVVTQL 329 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 34/163 (20%), Positives = 73/163 (44%), Gaps = 8/163 (4%) Query: 16 IETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA---QGELEIQVGDEVDVAL 72 + PG++ G V ++ VD G ++ + + + E ++VGD V V + Sbjct: 229 EKLEPGAVRTGRVTSLCDFGAFVDIGG-ADGLVHLSELSWSRVKHPEEVLKVGDAVSVYI 287 Query: 73 DAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL-NGIRAFL 131 +V++ LS ++ + W T+ Y+ ++V+GV+ G V L +GI + Sbjct: 288 LSVDEDKKRIALSIKRTQAEP-WTTVTDRYQIGQSVSGVVTQLTAFGAFVRLEDGIEGLI 346 Query: 132 PGSLVDVRPVRDTLHLE--GKELEFKVIKLDQKRNNVVVSRRA 172 S + ++ + G + ++I++D R + +S R+ Sbjct: 347 HISEMSDERIQHPRDVINEGDSVSARIIRIDPTRKRIGLSTRS 389 >UniRef50_C7H149 4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H149_9FIRM Length = 703 Score = 310 bits (795), Expect = 8e-83, Method: Composition-based stats. Identities = 127/357 (35%), Positives = 203/357 (56%), Gaps = 5/357 (1%) Query: 3 ESFAQLFEESLKE-IETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE-- 59 +L +E K + G IV GV+ AI+ ++V+ G K + IP + +G+ Sbjct: 303 NEMLELMDEIEKSMKSPKTGEIVEGVIDAINDKEIVVNLGCKKDGIIPNSEVALEEGQTI 362 Query: 60 -LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 VGDE+ + +DG G LLSR K + W LE A + ETV + VK Sbjct: 363 RDLFSVGDEIQAKVLKTDDGDGSILLSRRKMEASVHWAELEDALNNDETVKVDVVRAVKS 422 Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 G + F+P S + R + D G+ +E KVI++DQK + S + + + E Sbjct: 423 GVIANYKEVSGFIPLSQLSERFIEDASEFVGQTMEAKVIRVDQKLGKAIFSPKQLQKEEK 482 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVG 238 + +L + L G +++G V T+YGAFVD+GGVDGLLHI++++W ++KHPSE++ VG Sbjct: 483 NKRLQELWKKLNVGDDIEGKVMRFTEYGAFVDIGGVDGLLHISEISWGKLKHPSEVLTVG 542 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE 298 D I VK+L + E+ ++SLG KQ +PW I +Y G + G + + +YG F+E+E Sbjct: 543 DTINVKILSLNPEKGKISLGYKQNMPEPWSIIDDKYKAGDNVEGDIVQIKEYGAFLELEP 602 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQ 355 G++GL+H+SE+ + + + + V+++GD VE +L+ID++RRRISL +K P Q Sbjct: 603 GLDGLIHISEISHS-RVENINSVLHIGDNVEAKILEIDKDRRRISLSIKALIDPPEQ 658 Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats. Identities = 100/358 (27%), Positives = 175/358 (48%), Gaps = 12/358 (3%) Query: 177 ENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIV 235 E E ++ +++ + G V+G++ + D V+LG DG++ +++A + + ++ Sbjct: 307 ELMDEIEKSMKSPKTGEIVEGVIDAINDKEIVVNLGCKKDGIIPNSEVALEEGQTIRDLF 366 Query: 236 NVGDEITVKVLKFDRERTRVSLGLKQLGED-PWVAIAKRYPEGTKLTGRVTNLTDYGCFV 294 +VGDEI KVLK D + L +++ W + + V G Sbjct: 367 SVGDEIQAKVLKTDDGDGSILLSRRKMEASVHWAELEDALNNDETVKVDVVRAVKSGVIA 426 Query: 295 EIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPW 354 + V G + +S++ S+ V G +E V+ +D++ + KQ + Sbjct: 427 N-YKEVSGFIPLSQLS-ERFIEDASEFV--GQTMEAKVIRVDQKLGKAIFSPKQLQKEEK 482 Query: 355 QQF----AETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYK 410 + + N GD +EGK+ T++G F+ + GG+DGL+H+S+ISW + Sbjct: 483 NKRLQELWKKLNVGDDIEGKVMRFTEYGAFVDI-GGVDGLLHISEISWGK-LKHPSEVLT 540 Query: 411 KGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVEL 470 GD I +L ++ E+ +ISLG KQ +P++ K G V G + + GA +EL Sbjct: 541 VGDTINVKILSLNPEKGKISLGYKQNMPEPWSIIDDKYKAGDNVEGDIVQIKEYGAFLEL 600 Query: 471 ADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEK 528 G++G + SE S RVE+ VL +GD VEAK +D+ R ISLS++A + E+ Sbjct: 601 EPGLDGLIHISEISHSRVENINSVLHIGDNVEAKILEIDKDRRRISLSIKALIDPPEQ 658 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 58/284 (20%), Positives = 111/284 (39%), Gaps = 11/284 (3%) Query: 271 AKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEV 330 K G + G + + D V + +G++ SE+ + + +VGD ++ Sbjct: 316 MKSPKTGEIVEGVIDAINDKEIVVNLGCKKDGIIPNSEVALE-EGQTIRDLFSVGDEIQA 374 Query: 331 MVLDIDEERRRISLGLKQCKAN-PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDG 389 VL D+ I L ++ +A+ W + + N + V+ + G+ + G Sbjct: 375 KVLKTDDGDGSILLSRRKMEASVHWAELEDALNNDETVKVDVVRAVKSGVIANYKE-VSG 433 Query: 390 LVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNW----V 445 + LS +S + + G + A V++VD + + KQL ++ N Sbjct: 434 FIPLSQLSERFIEDASEF---VGQTMEAKVIRVDQKLGKAIFSPKQLQKEEKNKRLQELW 490 Query: 446 ALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKF 505 G + GKV GA V++ GV+G L SE S +++ + VL+VGD + K Sbjct: 491 KKLNVGDDIEGKVMRFTEYGAFVDIG-GVDGLLHISEISWGKLKHPSEVLTVGDTINVKI 549 Query: 506 TGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAE 549 ++ + ISL + ++ + E Sbjct: 550 LSLNPEKGKISLGYKQNMPEPWSIIDDKYKAGDNVEGDIVQIKE 593 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 47/235 (20%), Positives = 93/235 (39%), Gaps = 5/235 (2%) Query: 304 VHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNK 363 + + ++ + G ++ +++ ++E + + + ++ ++ Sbjct: 262 LPLKKLSNCTTIGVVASASAPGQIIREVMVIMNENQNETTGNEMLELMDEIEKSMKSPKT 321 Query: 364 GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVD 423 G+ VEG I +I D I + L DG++ S+++ G+ + GDEI A VL+ D Sbjct: 322 GEIVEGVIDAINDKEIVVNLGCKKDGIIPNSEVALEE-GQTIRDLFSVGDEIQAKVLKTD 380 Query: 424 AERERISLG-VKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASE 482 I L K A + V V G + V G++ S+ Sbjct: 381 DGDGSILLSRRKMEASVHWAELEDALNNDETVKVDVVRAVKSGVIANYKE-VSGFIPLSQ 439 Query: 483 ASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQ 537 S +EDA+ VG +EAK VD+K S + + ++ + + K+ Sbjct: 440 LSERFIEDASEF--VGQTMEAKVIRVDQKLGKAIFSPKQLQKEEKNKRLQELWKK 492 >UniRef50_B3WE79 30S Ribosomal protein S1 n=52 Tax=Firmicutes RepID=B3WE79_LACCB Length = 439 Score = 310 bits (794), Expect = 9e-83, Method: Composition-based stats. Identities = 125/370 (33%), Positives = 208/370 (56%), Gaps = 9/370 (2%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDA-GLKSESAIPAEQFKN---AQ 57 E+ + + + G V+ V+A++ ++V G E +P ++ Sbjct: 7 NENTETMADALKSVTTVKIGDTVKADVLAVEDKQLIVGIEGTGVEGVVPIKELSTQPIDD 66 Query: 58 GELEIQVGDEVDVALDAV---EDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVING 114 +VGD++D+ + + + G+ LLS+ + + + W ++ YE ET+T + Sbjct: 67 IHDVAKVGDKLDLVVLSTVGKDKENGQFLLSKRRLEAQKVWKEIQAKYEAGETITAPVTS 126 Query: 115 KVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVI 174 VKGG V G+R F+P S+V+ V D +GKELEFK+I+++ N +++S RA++ Sbjct: 127 VVKGGLVVN-AGVRGFVPASMVEDHFVEDLSQYKGKELEFKIIEIEPSENRLILSHRAIV 185 Query: 175 ESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEI 234 E+ + R ++ +Q G V+G V LT++GAFVDLGGVDGL+H++++++ V PS++ Sbjct: 186 EASKAEARKEIFAKIQPGDTVEGKVARLTNFGAFVDLGGVDGLVHVSEISFDHVDKPSDV 245 Query: 235 VNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFV 294 + VG EI VKVL D +R R+SL +K PW I ++ P G+ LTG V LT +G FV Sbjct: 246 LKVGQEIKVKVLNVDPDRNRISLSIKATLPQPWDDIEEKAPAGSVLTGTVKRLTTFGAFV 305 Query: 295 EIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPW 354 E+ GVEGLVH+S++ + P+ V+ G V+V VL +D + R++L +K + P Sbjct: 306 EVFPGVEGLVHISQISHEH-VATPADVLKEGQEVQVKVLSVDPDAHRLALSIKALQERPA 364 Query: 355 QQFAETHNKG 364 E+H G Sbjct: 365 GSEEESHEGG 374 Score = 274 bits (701), Expect = 6e-72, Method: Composition-based stats. Identities = 105/375 (28%), Positives = 176/375 (46%), Gaps = 17/375 (4%) Query: 176 SENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG--VDGLLHITDMAWKRVKHPSE 233 +E A+ + + ++ G VK V + D V + G V+G++ I +++ + + + Sbjct: 10 TETMADALKSVTTVKIGDTVKADVLAVEDKQLIVGIEGTGVEGVVPIKELSTQPIDDIHD 69 Query: 234 IVNVGDEITVKVLKF---DRERTRVSLGLKQLGEDP-WVAIAKRYPEGTKLTGRVTNLTD 289 + VGD++ + VL D+E + L ++L W I +Y G +T VT++ Sbjct: 70 VAKVGDKLDLVVLSTVGKDKENGQFLLSKRRLEAQKVWKEIQAKYEAGETITAPVTSVVK 129 Query: 290 YGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC 349 G V GV G V S M + S+ G +E +++I+ R+ L + Sbjct: 130 GGLVV--NAGVRGFVPAS-MVEDHFVEDLSQY--KGKELEFKIIEIEPSENRLILSHRAI 184 Query: 350 KA----NPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEA 405 ++ GD VEGK+ +T+FG F+ L GG+DGLVH+S+IS++ ++ Sbjct: 185 VEASKAEARKEIFAKIQPGDTVEGKVARLTNFGAFVDL-GGVDGLVHVSEISFDHV-DKP 242 Query: 406 VREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKG 465 K G EI VL VD +R RISL +K P+++ G+++TG V + G Sbjct: 243 SDVLKVGQEIKVKVLNVDPDRNRISLSIKATLPQPWDDIEEKAPAGSVLTGTVKRLTTFG 302 Query: 466 ATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEA 525 A VE+ GVEG + S+ S + V VL G EV+ K VD ++LS++A E Sbjct: 303 AFVEVFPGVEGLVHISQISHEHVATPADVLKEGQEVQVKVLSVDPDAHRLALSIKALQER 362 Query: 526 DEKDAIATVNKQEDA 540 + + Sbjct: 363 PAGSEEESHEGGNSS 377 Score = 61.5 bits (148), Expect = 9e-08, Method: Composition-based stats. Identities = 27/109 (24%), Positives = 42/109 (38%), Gaps = 5/109 (4%) Query: 446 ALNKKGAIVTGKVTAVDAKGATVELAD-GVEGYLRASEASRDRVEDATLVLSVGDEVEAK 504 K G V V AV+ K V + GVEG + E S ++D V VGD+++ Sbjct: 21 TTVKIGDTVKADVLAVEDKQLIVGIEGTGVEGVVPIKELSTQPIDDIHDVAKVGDKLDLV 80 Query: 505 FTGV---DRKNRAISLSVRAKDEAD-EKDAIATVNKQEDANFSNNAMAE 549 D++N LS R + K+ A E ++ + Sbjct: 81 VLSTVGKDKENGQFLLSKRRLEAQKVWKEIQAKYEAGETITAPVTSVVK 129 >UniRef50_C7RHT6 Hydroxymethylbutenyl pyrophosphate reductase n=8 Tax=Clostridiales Family XI. Incertae Sedis RepID=C7RHT6_ANAPD Length = 686 Score = 309 bits (791), Expect = 2e-82, Method: Composition-based stats. Identities = 145/358 (40%), Positives = 221/358 (61%), Gaps = 10/358 (2%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE 61 E F E+SLK+I + IV+G V+ + D V VD +++ I ++ + + Sbjct: 279 KEEFMNSLEDSLKKIYPKE--IVKGTVIDVKDDEVFVDIQFRADGIIKLDEMTEEEAKDP 336 Query: 62 ---IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 VGDE+DV + ++DG G LS + + + W L + E+ E V GV++G KG Sbjct: 337 KNSFNVGDEIDVFVIKLDDGEGNVSLSTRRVEGMKVWKDLAEKAENDELVHGVVSGFNKG 396 Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 G TV + GI F+P S + V++ G+E + K+I +D+++N +V+SR+ V+E E Sbjct: 397 GLTVNVEGINGFVPASQIATYFVKNFKKFVGEEWDLKIISIDERKNRLVLSRKEVVEDE- 455 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVG 238 D L E L+EG V G V LTD+GAFV++ G+DGLLH++D+AW RV+HPS+++NVG Sbjct: 456 ---LDGLWEELEEGQVVTGKVARLTDFGAFVEVNGLDGLLHVSDIAWSRVEHPSDVLNVG 512 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE 298 DEI VK+LK ++E+ R+SLG KQL E P+ A ++ G +TG+V NL D+G FVE+ + Sbjct: 513 DEIEVKILKLNQEKNRISLGRKQLLEKPFEAFVNQHEVGDVVTGKVVNLLDFGAFVEVAD 572 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQ 356 GVEGLVHVSE+ W + PS +NVGD +EV ++ ID + ++ L +K K P + Sbjct: 573 GVEGLVHVSEISWEH-VEKPSDELNVGDEIEVKIISIDTDEEKVGLSIKALKEAPERP 629 Score = 286 bits (731), Expect = 2e-75, Method: Composition-based stats. Identities = 126/373 (33%), Positives = 193/373 (51%), Gaps = 8/373 (2%) Query: 160 DQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLL 218 D+ VV S + E + L+ + VKG V ++ D FVD+ DG++ Sbjct: 264 DEIIEEVVSSMDEFTKEEFMNSLEDSLKKIYPKEIVKGTVIDVKDDEVFVDIQFRADGII 323 Query: 219 HITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDP-WVAIAKRYPEG 277 + +M + K P NVGDEI V V+K D VSL +++ W +A++ Sbjct: 324 KLDEMTEEEAKDPKNSFNVGDEIDVFVIKLDDGEGNVSLSTRRVEGMKVWKDLAEKAEND 383 Query: 278 TKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDE 337 + G V+ G V +E G+ G V S++ T + K V G+ ++ ++ IDE Sbjct: 384 ELVHGVVSGFNKGGLTVNVE-GINGFVPASQIA-TYFVKNFKKFV--GEEWDLKIISIDE 439 Query: 338 ERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDIS 397 + R+ L K+ + E +G V GK+ +TDFG F+ + G+DGL+H+SDI+ Sbjct: 440 RKNRLVLSRKEVVEDELDGLWEELEEGQVVTGKVARLTDFGAFVEV-NGLDGLLHVSDIA 498 Query: 398 WNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGK 457 W+ E GDEI +L+++ E+ RISLG KQL E PF +V ++ G +VTGK Sbjct: 499 WSRV-EHPSDVLNVGDEIEVKILKLNQEKNRISLGRKQLLEKPFEAFVNQHEVGDVVTGK 557 Query: 458 VTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISL 517 V + GA VE+ADGVEG + SE S + VE + L+VGDE+E K +D + L Sbjct: 558 VVNLLDFGAFVEVADGVEGLVHVSEISWEHVEKPSDELNVGDEIEVKIISIDTDEEKVGL 617 Query: 518 SVRAKDEADEKDA 530 S++A EA E+ Sbjct: 618 SIKALKEAPERPE 630 Score = 178 bits (452), Expect = 5e-43, Method: Composition-based stats. Identities = 68/292 (23%), Positives = 133/292 (45%), Gaps = 7/292 (2%) Query: 259 LKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHP 318 K+ + K+ + G V ++ D FV+I+ +G++ + EM + P Sbjct: 278 TKEEFMNSLEDSLKKIYPKEIVKGTVIDVKDDEVFVDIQFRADGIIKLDEMTEE-EAKDP 336 Query: 319 SKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDR-VEGKIKSITDF 377 NVGD ++V V+ +D+ +SL ++ + + + D V G + Sbjct: 337 KNSFNVGDEIDVFVIKLDDGEGNVSLSTRRVEGMKVWKDLAEKAENDELVHGVVSGFNKG 396 Query: 378 GIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLA 437 G+ + ++ GI+G V S I+ + + G+E ++ +D + R+ L K++ Sbjct: 397 GLTVNVE-GINGFVPASQIA-TYFVKNFKKF--VGEEWDLKIISIDERKNRLVLSRKEVV 452 Query: 438 EDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSV 497 ED + ++G +VTGKV + GA VE+ +G++G L S+ + RVE + VL+V Sbjct: 453 EDELDGLWEELEEGQVVTGKVARLTDFGAFVEV-NGLDGLLHVSDIAWSRVEHPSDVLNV 511 Query: 498 GDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAE 549 GDE+E K ++++ ISL + E + + + + + Sbjct: 512 GDEIEVKILKLNQEKNRISLGRKQLLEKPFEAFVNQHEVGDVVTGKVVNLLD 563 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 36/175 (20%), Positives = 67/175 (38%), Gaps = 8/175 (4%) Query: 16 IETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE---LEIQVGDEVDVAL 72 E G +V G V + V+ + + ++ E + VGDE++V + Sbjct: 461 EELEEGQVVTGKVARLTDFGAFVEVNG-LDGLLHVSDIAWSRVEHPSDVLNVGDEIEVKI 519 Query: 73 DAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL-NGIRAFL 131 + L R++ + +E + VTG + + G VE+ +G+ + Sbjct: 520 LKLNQEKNRISLGRKQLLEKP-FEAFVNQHEVGDVVTGKVVNLLDFGAFVEVADGVEGLV 578 Query: 132 PGSLVDVRPVRDTLH--LEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQ 184 S + V G E+E K+I +D V +S +A+ E+ ER Sbjct: 579 HVSEISWEHVEKPSDELNVGDEIEVKIISIDTDEEKVGLSIKALKEAPERPERRA 633 >UniRef50_Q1NY10 RNA binding S1 n=3 Tax=Deltaproteobacteria RepID=Q1NY10_9DELT Length = 410 Score = 308 bits (790), Expect = 3e-82, Method: Composition-based stats. Identities = 119/360 (33%), Positives = 194/360 (53%), Gaps = 5/360 (1%) Query: 5 FAQLFE-ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQ 63 FA+LFE E + + PG ++ VV + ++ + +D G KSE ++ +F + +G + Sbjct: 4 FAELFEQEGVGGQQLEPGRKIKARVVEVGREWIFIDLGGKSEGSVAKAEFTDPEGNCTVA 63 Query: 64 VGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVE 123 GDE++V A + K A LE+A+ V G + + KGGF + Sbjct: 64 AGDELEVFFLADKKNEKIF---TTKVGGAAAQAHLEEAFHGKVPVEGTVESETKGGFLIR 120 Query: 124 LNGI-RAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 + G RAF P S +D+R + G+ F +++ + N+++SRR ++E E + Sbjct: 121 IGGSSRAFCPYSQMDLRRAANPEEYLGQSFSFLIMEFREGGKNILLSRRQLLEQERQELK 180 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 +QL ++L+ G V G V ++ D+GAFVD+GG++GL+ I+++ W RV+ + G ++ Sbjct: 181 EQLRQSLKVGDLVTGTVTSVRDFGAFVDIGGIEGLIPISEIGWGRVEDIHSHLEPGRQVE 240 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 V V D E+ R SL LK DPW A +PEG+ GRV LTD+G FV + GV+G Sbjct: 241 VAVKSLDWEKDRYSLSLKDTLPDPWEQAAVSFPEGSTQRGRVARLTDFGAFVTLAPGVDG 300 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHN 362 LVH+S++ + HP +VV VGD +EV V +D E++RISL + + + Sbjct: 301 LVHISKLGAGRRLNHPREVVQVGDELEVRVEAVDVEQKRISLAVAPPTGSAEPETPYAIP 360 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 88/362 (24%), Positives = 159/362 (43%), Gaps = 16/362 (4%) Query: 175 ESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSE 233 +E + + L+ G ++K V + F+DLGG +G + + + Sbjct: 4 FAELFEQEGVGGQQLEPGRKIKARVVEVGREWIFIDLGGKSEGSVAKAEFTD---PEGNC 60 Query: 234 IVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCF 293 V GDE+ V L D++ ++ K G + + + + G V + T G Sbjct: 61 TVAAGDELEVFFLA-DKKNEKI-FTTKVGGAAAQAHLEEAFHGKVPVEGTVESETKGGFL 118 Query: 294 VEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP 353 + I S+M + +P + + G ++++ E + I L +Q Sbjct: 119 IRIGGSSRAFCPYSQM-DLRRAANPEEYL--GQSFSFLIMEFREGGKNILLSRRQLLEQE 175 Query: 354 W----QQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREY 409 +Q ++ GD V G + S+ DFG F+ + GGI+GL+ +S+I W E+ Sbjct: 176 RQELKEQLRQSLKVGDLVTGTVTSVRDFGAFVDI-GGIEGLIPISEIGWGRV-EDIHSHL 233 Query: 410 KKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVE 469 + G ++ V +D E++R SL +K DP+ +G+ G+V + GA V Sbjct: 234 EPGRQVEVAVKSLDWEKDRYSLSLKDTLPDPWEQAAVSFPEGSTQRGRVARLTDFGAFVT 293 Query: 470 LADGVEGYLRASEA-SRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEK 528 LA GV+G + S+ + R+ V+ VGDE+E + VD + + ISL+V + E Sbjct: 294 LAPGVDGLVHISKLGAGRRLNHPREVVQVGDELEVRVEAVDVEQKRISLAVAPPTGSAEP 353 Query: 529 DA 530 + Sbjct: 354 ET 355 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 87/341 (25%), Positives = 149/341 (43%), Gaps = 23/341 (6%) Query: 100 KAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKEL----EFK 155 + E + + + ++L G S V T + E + Sbjct: 16 QQLEPGRKIKARVVEVGREWIFIDLGG------KSEGSVAKAEFTDPEGNCTVAAGDELE 69 Query: 156 VIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV- 214 V L K+N + + + + + + + V+G V++ T G + +GG Sbjct: 70 VFFLADKKNEKIFTTKVGGAAAQAHLEEAFHGKVP----VEGTVESETKGGFLIRIGGSS 125 Query: 215 DGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRY 274 + M +R +P E + G + +++F + L +QL E + ++ Sbjct: 126 RAFCPYSQMDLRRAANPEEYL--GQSFSFLIMEFREGGKNILLSRRQLLEQERQELKEQL 183 Query: 275 ----PEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEV 330 G +TG VT++ D+G FV+I G+EGL+ +SE+ W + + G VEV Sbjct: 184 RQSLKVGDLVTGTVTSVRDFGAFVDIG-GIEGLIPISEIGWG-RVEDIHSHLEPGRQVEV 241 Query: 331 MVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGL 390 V +D E+ R SL LK +PW+Q A + +G G++ +TDFG F+ L G+DGL Sbjct: 242 AVKSLDWEKDRYSLSLKDTLPDPWEQAAVSFPEGSTQRGRVARLTDFGAFVTLAPGVDGL 301 Query: 391 VHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISL 431 VH+S + + GDE+ V VD E++RISL Sbjct: 302 VHISKLGAGRRLNHPREVVQVGDELEVRVEAVDVEQKRISL 342 Score = 152 bits (385), Expect = 3e-35, Method: Composition-based stats. Identities = 65/282 (23%), Positives = 105/282 (37%), Gaps = 14/282 (4%) Query: 272 KRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVM 331 ++ G K+ RV + F+++ EG V +E N V GD +EV Sbjct: 16 QQLEPGRKIKARVVEVGREWIFIDLGGKSEGSVAKAEFTDPEGNC----TVAAGDELEVF 71 Query: 332 VLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLV 391 L D++ +I K A E + VEG ++S T G I + G Sbjct: 72 FLA-DKKNEKI-FTTKVGGAAAQAHLEEAFHGKVPVEGTVESETKGGFLIRIGGSSRAFC 129 Query: 392 HLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALN--- 448 S + G + ++++ + I L +QL E Sbjct: 130 PYSQM-DLRRAANPEEYL--GQSFSFLIMEFREGGKNILLSRRQLLEQERQELKEQLRQS 186 Query: 449 -KKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTG 507 K G +VTG VT+V GA V++ G+EG + SE RVED L G +VE Sbjct: 187 LKVGDLVTGTVTSVRDFGAFVDIG-GIEGLIPISEIGWGRVEDIHSHLEPGRQVEVAVKS 245 Query: 508 VDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAE 549 +D + SLS++ + A + + + + Sbjct: 246 LDWEKDRYSLSLKDTLPDPWEQAAVSFPEGSTQRGRVARLTD 287 Score = 84.6 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 30/201 (14%), Positives = 58/201 (28%), Gaps = 8/201 (3%) Query: 344 LGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGE 403 + + G +++ ++ + IFI L G +G V ++ + Sbjct: 1 MSGFAELFEQEGVGGQQLEPGRKIKARVVEVGREWIFIDLGGKSEGSVAKAEFTD----P 56 Query: 404 EAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDA 463 E GDE+ L D + E+I K + V G V + Sbjct: 57 EGNCTVAAGDELEVFFLA-DKKNEKI-FTTKVGGAAAQAHLEEAFHGKVPVEGTVESETK 114 Query: 464 KGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKD 523 G + + + S+ R + L G + I LS R Sbjct: 115 GGFLIRIGGSSRAFCPYSQMDLRRAANPEEYL--GQSFSFLIMEFREGGKNILLSRRQLL 172 Query: 524 EADEKDAIATVNKQEDANFSN 544 E + ++ + + Sbjct: 173 EQERQELKEQLRQSLKVGDLV 193 >UniRef50_B2A4N7 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A4N7_NATTJ Length = 705 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 123/362 (33%), Positives = 212/362 (58%), Gaps = 6/362 (1%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE-- 59 + + E+S +++ G +V+G VV + +D ++D G K E ++P + +GE Sbjct: 309 QDELMKATEDSADKLD--RGQVVKGKVVKVTEDEAMIDVGYKFEGSVPVNEMPIKEGESL 366 Query: 60 -LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 + GDE+DV + V+D G+ +LS++ A + + W LE+ E+ E + + +VKG Sbjct: 367 EDLLSEGDEIDVKVVKVDDEEGQLILSKKWADKDKQWEQLEQLMENDEEIKAQVTEEVKG 426 Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 G V+L ++ F+P S VD+ V D G+EL K I+LD+ RN +V+S++ ++E E Sbjct: 427 GLVVDLGQLQGFIPASHVDIHYVPDLSKYVGEELRLKPIELDRSRNKIVLSQKNILEQEQ 486 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVG 238 ++++ +E + EG V G VK LTD+GAF+D+GG+DGL HI+ ++ R+ HP + G Sbjct: 487 EEKKNKTMETITEGDIVDGTVKRLTDFGAFIDIGGIDGLCHISQISHSRIDHPESELETG 546 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE 298 + + VKVL D E R+SL +K+ DP+ K+Y G + G+V ++G F+EI Sbjct: 547 ENVKVKVLSLDPENERISLSIKEAQPDPFETFMKQYKSGDIVQGKVVRTVNFGAFIEITP 606 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFA 358 GVEGL H+S++ + VVN GD V V +L ID++++++SL +K+ + ++ Sbjct: 607 GVEGLCHISQLSDDH-VAKTQDVVNEGDQVTVKILSIDDQQKKVSLSIKEAQGKSKKEQE 665 Query: 359 ET 360 + Sbjct: 666 QE 667 Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats. Identities = 116/420 (27%), Positives = 199/420 (47%), Gaps = 19/420 (4%) Query: 144 TLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLT 203 + GK EF+ + ++ N + E + + L G VKG V +T Sbjct: 280 IKEVVGKMREFE--EQNENLNTNSDESTQESQDELMKATEDSADKLDRGQVVKGKVVKVT 337 Query: 204 DYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLK-Q 261 + A +D+G +G + + +M K + ++++ GDEI VKV+K D E ++ L K Sbjct: 338 EDEAMIDVGYKFEGSVPVNEMPIKEGESLEDLLSEGDEIDVKVVKVDDEEGQLILSKKWA 397 Query: 262 LGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKV 321 + W + + ++ +VT G V++ + ++G + S + + SK Sbjct: 398 DKDKQWEQLEQLMENDEEIKAQVTEEVKGGLVVDLGQ-LQGFIPASHV-DIHYVPDLSKY 455 Query: 322 VNVGDVVEVMVLDIDEERRRISLG----LKQCKANPWQQFAETHNKGDRVEGKIKSITDF 377 V G+ + + +++D R +I L L+Q + + ET +GD V+G +K +TDF Sbjct: 456 V--GEELRLKPIELDRSRNKIVLSQKNILEQEQEEKKNKTMETITEGDIVDGTVKRLTDF 513 Query: 378 GIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLA 437 G FI + GGIDGL H+S IS + + E + G+ + VL +D E ERISL +K+ Sbjct: 514 GAFIDI-GGIDGLCHISQISHSRI-DHPESELETGENVKVKVLSLDPENERISLSIKEAQ 571 Query: 438 EDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSV 497 DPF ++ K G IV GKV GA +E+ GVEG S+ S D V V++ Sbjct: 572 PDPFETFMKQYKSGDIVQGKVVRTVNFGAFIEITPGVEGLCHISQLSDDHVAKTQDVVNE 631 Query: 498 GDEVEAKFTGVDRKNRAISLSVRAKD----EADEKDAIATVNKQEDANFSNNAMAEAFKA 553 GD+V K +D + + +SLS++ + E++ A ++ + + F Sbjct: 632 GDQVTVKILSIDDQQKKVSLSIKEAQGKSKKEQEQEEFAKYQDSQEEEEGV-KLGDMFGD 690 Score = 62.7 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 36/91 (39%), Gaps = 3/91 (3%) Query: 15 EIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQG---ELEIQVGDEVDVA 71 + + G IV+G VV ++ E Q + + + GD+V V Sbjct: 579 MKQYKSGDIVQGKVVRTVNFGAFIEITPGVEGLCHISQLSDDHVAKTQDVVNEGDQVTVK 638 Query: 72 LDAVEDGFGETLLSREKAKRHEAWITLEKAY 102 + +++D + LS ++A+ ++ + Sbjct: 639 ILSIDDQQKKVSLSIKEAQGKSKKEQEQEEF 669 >UniRef50_A9ESM2 RpsA3 protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9ESM2_SORC5 Length = 683 Score = 305 bits (782), Expect = 3e-81, Method: Composition-based stats. Identities = 132/460 (28%), Positives = 221/460 (48%), Gaps = 20/460 (4%) Query: 18 TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVED 77 G V G V I + +D K+ + E GD+ + + Sbjct: 233 FSIGEEVFGKVSKITDHAIWIDIAGKATGLFDRREILE---EEPPVEGDQFIATVASTGV 289 Query: 78 GFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVD 137 G LLSR + +A E A + E++ G + G VKGG V+L G+RAF P S VD Sbjct: 290 RGGMLLLSRAPVQLDQARARAEAALQSGESIEGFVTGAVKGGLEVDLGGLRAFAPASHVD 349 Query: 138 VRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKG 197 +R D +L G+ L+F V + +K ++VVSRR ++E E+ R + L +++ G KG Sbjct: 350 LRHGADLNYLVGQRLDFGVTQFAKKGRDIVVSRRKMLEEESRKARTEALTSIEPGSLHKG 409 Query: 198 IVKNLTDYGAFV---DLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTR 254 IV+ + +G FV D GGV+GL+H+++ + R +++ G EI VKVL+ D ++ + Sbjct: 410 IVRKVVAWGVFVALPDAGGVEGLVHMSEASHDRGAKLADLFKPGAEIDVKVLRVD-DKGK 468 Query: 255 VSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNK 314 + L K DPW A+ ++Y GT+ G+V L +G F+E+E G++GL+H +++ Sbjct: 469 LWLSRKAATVDPWDAVKEKYAVGTRHKGKVARLQPFGAFIELEPGIDGLIHTADLSM-KP 527 Query: 315 NIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSI 374 HP++VV VGD V+V+V D RRI L + + +G V+ + + Sbjct: 528 IQHPNEVVKVGDDVDVVVATCDAAGRRIGL-HPAPPEGEESEPRQRVQQGKAVKVAVTQV 586 Query: 375 TDFGIFIGLDGGI----DGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERIS 430 T+ G+ + + G G + + G + +E+ G ++ A +++VD R Sbjct: 587 TEGGLVVRVLGTTGRAARGFIPAGH-TGTQRGTDLRKEFPIGTQLDAKIIEVDPRRGEAK 645 Query: 431 LGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVEL 470 L ++ L ED + G V G +L Sbjct: 646 LSIRALKEDAEKQAYQQYRAG------VAREAKFGTFADL 679 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 106/481 (22%), Positives = 187/481 (38%), Gaps = 24/481 (4%) Query: 85 SREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGI-RAFLPGSLVDVRPVRD 143 + + + A+ E V G ++ +++ G + + + Sbjct: 216 RKRRKGQGAPPPRERPAFSIGEEVFGKVSKITDHAIWIDIAGKATGLFDRREI----LEE 271 Query: 144 TLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLT 203 +EG + V + +++SR V + A + L++ G ++G V Sbjct: 272 EPPVEGDQFIATVASTGVRGGMLLLSRAPVQLDQARARAEAALQS---GESIEGFVTGAV 328 Query: 204 DYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLG 263 G VDLGG+ + + + + VG + V +F ++ + + +++ Sbjct: 329 KGGLEVDLGGLRAFAPASHVDLRHGADLN--YLVGQRLDFGVTQFAKKGRDIVVSRRKML 386 Query: 264 ED----PWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE--GVEGLVHVSEMDWTNKNIH 317 E+ G+ G V + +G FV + + GVEGLVH+SE + Sbjct: 387 EEESRKARTEALTSIEPGSLHKGIVRKVVAWGVFVALPDAGGVEGLVHMSEASHD-RGAK 445 Query: 318 PSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDF 377 + + G ++V VL +D ++ ++ L K +PW E + G R +GK+ + F Sbjct: 446 LADLFKPGAEIDVKVLRVD-DKGKLWLSRKAATVDPWDAVKEKYAVGTRHKGKVARLQPF 504 Query: 378 GIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLA 437 G FI L+ GIDGL+H +D+S + K GD++ VV DA RI L Sbjct: 505 GAFIELEPGIDGLIHTADLSMKPI-QHPNEVVKVGDDVDVVVATCDAAGRRIGL-HPAPP 562 Query: 438 EDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGV----EGYLRASEASRDRVEDATL 493 E + ++G V VT V G V + G++ A R D Sbjct: 563 EGEESEPRQRVQQGKAVKVAVTQVTEGGLVVRVLGTTGRAARGFIPAGHTGTQRGTDLRK 622 Query: 494 VLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKA 553 +G +++AK VD + LS+RA E EK A A+ K Sbjct: 623 EFPIGTQLDAKIIEVDPRRGEAKLSIRALKEDAEKQAYQQYRAGVAREAKFGTFADLMKK 682 Query: 554 A 554 + Sbjct: 683 S 683 Score = 75.4 bits (184), Expect = 6e-12, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 69/207 (33%), Gaps = 22/207 (10%) Query: 15 EIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK---NAQGELEIQVGDEVDVA 71 + + G+ +G V + ++ + I ++VGD+VDV Sbjct: 485 KEKYAVGTRHKGKVARLQPFGAFIELEPGIDGLIHTADLSMKPIQHPNEVVKVGDDVDVV 544 Query: 72 LDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGI---- 127 + + L A + + + V + +GG V + G Sbjct: 545 VATCDAAGRRIGL--HPAPPEGEESEPRQRVQQGKAVKVAVTQVTEGGLVVRVLGTTGRA 602 Query: 128 -RAFLPGSLVDVRPVRDT--LHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQ 184 R F+P + D G +L+ K+I++D +R +S RA+ E Sbjct: 603 ARGFIPAGHTGTQRGTDLRKEFPIGTQLDAKIIEVDPRRGEAKLSIRALKEDAEK----- 657 Query: 185 LLENLQEGMEVKGIVKNLTDYGAFVDL 211 Q + + V +G F DL Sbjct: 658 -----QAYQQYRAGVAREAKFGTFADL 679 >UniRef50_A2ID48 RpsA n=1 Tax=Pasteuria ramosa RepID=A2ID48_9BACL Length = 392 Score = 304 bits (780), Expect = 5e-81, Method: Composition-based stats. Identities = 120/348 (34%), Positives = 199/348 (57%), Gaps = 5/348 (1%) Query: 8 LFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE---IQV 64 + EE I GS+V G V IDK+ L+ E+ +P + + +++ Sbjct: 1 MSEEMNSTIPFEIGSLVTGSVTKIDKNQALIKIAEDIEAILPISELSCLRINEVGDMLKL 60 Query: 65 GDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL 124 DE+++ + +++ + +LS+ +AW L+ YE+ E + ++ VKGG ++L Sbjct: 61 DDELELEVLRLDEEENKFILSKRAVDAKKAWPFLQHKYENNENIEAKVSDVVKGGLVIDL 120 Query: 125 NGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQ 184 G+R F+P SLV+ V D + + + K+ ++DQ N +++S RAV E +R+ Sbjct: 121 -GVRGFVPASLVECHYVEDFSDYKDRVITMKIAEIDQDSNKLILSCRAVHEEAAQHQREA 179 Query: 185 LLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 N++ G V GIV+ LTD+GAFVD+G VDGL+HI+ ++W+RV HPS+++N+GDE+ K Sbjct: 180 TFNNIEIGSVVDGIVRRLTDFGAFVDVGAVDGLVHISQISWQRVNHPSDVLNIGDEVKCK 239 Query: 245 VLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLV 304 VLKFDRE R+SL ++ PW + + E + G V L +G FVEI GVEGL+ Sbjct: 240 VLKFDRESGRISLSIRDTQPGPWSGVEDQLVENDIVKGVVKRLVSFGAFVEILPGVEGLM 299 Query: 305 HVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN 352 H+SE+ + PS+++ G + V +L++D RR+SL + + N Sbjct: 300 HISEISHRHIVT-PSEILKEGQEILVKILNVDSNARRVSLTMCDVEQN 346 Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats. Identities = 86/355 (24%), Positives = 162/355 (45%), Gaps = 13/355 (3%) Query: 189 LQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLK 247 + G V G V + A + + ++ +L I++++ R+ +++ + DE+ ++VL+ Sbjct: 11 FEIGSLVTGSVTKIDKNQALIKIAEDIEAILPISELSCLRINEVGDMLKLDDELELEVLR 70 Query: 248 FDRERTRVSLGLKQLG-EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHV 306 D E + L + + + W + +Y + +V+++ G +++ GV G V Sbjct: 71 LDEEENKFILSKRAVDAKKAWPFLQHKYENNENIEAKVSDVVKGGLVIDL--GVRGFVPA 128 Query: 307 SEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQF----AETHN 362 S + + S V+ + + +ID++ ++ L + Q Sbjct: 129 S-LVECHYVEDFSDY--KDRVITMKIAEIDQDSNKLILSCRAVHEEAAQHQREATFNNIE 185 Query: 363 KGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQV 422 G V+G ++ +TDFG F+ + +DGLVH+S ISW GDE+ VL+ Sbjct: 186 IGSVVDGIVRRLTDFGAFVDVGA-VDGLVHISQISWQRVN-HPSDVLNIGDEVKCKVLKF 243 Query: 423 DAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASE 482 D E RISL ++ P++ + IV G V + + GA VE+ GVEG + SE Sbjct: 244 DRESGRISLSIRDTQPGPWSGVEDQLVENDIVKGVVKRLVSFGAFVEILPGVEGLMHISE 303 Query: 483 ASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQ 537 S + + +L G E+ K VD R +SL++ ++ + + + NKQ Sbjct: 304 ISHRHIVTPSEILKEGQEILVKILNVDSNARRVSLTMCDVEQNTSQKSENSSNKQ 358 Score = 95.0 bits (235), Expect = 7e-18, Method: Composition-based stats. Identities = 41/198 (20%), Positives = 74/198 (37%), Gaps = 7/198 (3%) Query: 351 ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYK 410 + G V G + I I + I+ ++ +S++S E K Sbjct: 1 MSEEMNSTIPFEIGSLVTGSVTKIDKNQALIKIAEDIEAILPISELSCLRINE-VGDMLK 59 Query: 411 KGDEIAAVVLQVDAERERISLGVKQLA-EDPFNNWVALNKKGAIVTGKVTAVDAKGATVE 469 DE+ VL++D E + L + + + + + + KV+ V G ++ Sbjct: 60 LDDELELEVLRLDEEENKFILSKRAVDAKKAWPFLQHKYENNENIEAKVSDVVKGGLVID 119 Query: 470 LADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEK- 528 L GV G++ AS VED + + K +D+ + + LS RA E + Sbjct: 120 L--GVRGFVPASLVECHYVEDFSDY--KDRVITMKIAEIDQDSNKLILSCRAVHEEAAQH 175 Query: 529 DAIATVNKQEDANFSNNA 546 AT N E + + Sbjct: 176 QREATFNNIEIGSVVDGI 193 Score = 68.4 bits (166), Expect = 6e-10, Method: Composition-based stats. Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 2/107 (1%) Query: 447 LNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFT 506 + G++VTG VT +D A +++A+ +E L SE S R+ + +L + DE+E + Sbjct: 10 PFEIGSLVTGSVTKIDKNQALIKIAEDIEAILPISELSCLRINEVGDMLKLDDELELEVL 69 Query: 507 GVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKA 553 +D + LS RA D + K E+ +++ K Sbjct: 70 RLDEEENKFILSKRAVDAKKAWPFLQH--KYENNENIEAKVSDVVKG 114 >UniRef50_C8R0E8 RNA binding S1 domain protein n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R0E8_9DELT Length = 417 Score = 304 bits (779), Expect = 6e-81, Method: Composition-based stats. Identities = 120/351 (34%), Positives = 194/351 (55%), Gaps = 5/351 (1%) Query: 5 FAQLFEESLKEIE-TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQ 63 F +LF E E PG + VV+I ++ + +D G KSE A+ +F + +G + Sbjct: 4 FEELFAEHEAAGEKLTPGQQITAEVVSIAREWIFIDLGGKSEGAVAKAEFIDQEGNCTVA 63 Query: 64 VGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVE 123 VGD+V V A + L K LE+AY V G + + KGGF V Sbjct: 64 VGDKVTVYFLAEKKQEK---LFTTKVGGAATQAHLEEAYHSGIPVEGTVEAEGKGGFQVR 120 Query: 124 LNG-IRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 ++G +RAF P S + +R V + G+ FK+I+ + N+++SRR ++E E +A + Sbjct: 121 ISGNVRAFCPFSQMALRRVENNEEYLGQGFAFKIIEFREGGRNIILSRRRLLEEERAARK 180 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 ++L ++L G +V G V ++ +GAFVD+GG++GL+ ++++ W V+ + G E+ Sbjct: 181 EELRQSLAVGDKVTGTVTSVQKFGAFVDIGGIEGLIPMSEIGWGTVEDIHSHLEPGREVE 240 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 V V D E+ R SL LK DPW +A R+PEG++ G+V L D+G FV + G++G Sbjct: 241 VVVKSLDWEKERYSLSLKDTLPDPWEGVAARFPEGSRHQGKVARLMDFGAFVTLAPGIDG 300 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP 353 LVH+S++ + HP +VV G+ +EV + ID ERRR+SL + + Sbjct: 301 LVHISKLGAGRRINHPREVVQPGETLEVEIEAIDSERRRLSLSVPPPAESE 351 Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats. Identities = 93/365 (25%), Positives = 159/365 (43%), Gaps = 16/365 (4%) Query: 175 ESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSE 233 E AE + E L G ++ V ++ F+DLGG +G + + + + Sbjct: 4 FEELFAEHEAAGEKLTPGQQITAEVVSIAREWIFIDLGGKSEGAVAKAEFID---QEGNC 60 Query: 234 IVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCF 293 V VGD++TV L ++++ ++ K G + + Y G + G V G Sbjct: 61 TVAVGDKVTVYFLA-EKKQEKL-FTTKVGGAATQAHLEEAYHSGIPVEGTVEAEGKGGFQ 118 Query: 294 VEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP 353 V I V S+M + + + + G +++ E R I L ++ Sbjct: 119 VRISGNVRAFCPFSQMAL-RRVENNEEYL--GQGFAFKIIEFREGGRNIILSRRRLLEEE 175 Query: 354 WQQFAETHN----KGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREY 409 E GD+V G + S+ FG F+ + GGI+GL+ +S+I W E+ Sbjct: 176 RAARKEELRQSLAVGDKVTGTVTSVQKFGAFVDI-GGIEGLIPMSEIGWGTV-EDIHSHL 233 Query: 410 KKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVE 469 + G E+ VV +D E+ER SL +K DP+ A +G+ GKV + GA V Sbjct: 234 EPGREVEVVVKSLDWEKERYSLSLKDTLPDPWEGVAARFPEGSRHQGKVARLMDFGAFVT 293 Query: 470 LADGVEGYLRASEA-SRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEK 528 LA G++G + S+ + R+ V+ G+ +E + +D + R +SLSV E++ Sbjct: 294 LAPGIDGLVHISKLGAGRRINHPREVVQPGETLEVEIEAIDSERRRLSLSVPPPAESEAA 353 Query: 529 DAIAT 533 A Sbjct: 354 GEPAQ 358 Score = 201 bits (512), Expect = 5e-50, Method: Composition-based stats. Identities = 86/347 (24%), Positives = 147/347 (42%), Gaps = 23/347 (6%) Query: 95 WITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEF 154 + + +T + + ++L G S V +E Sbjct: 11 HEAAGEKLTPGQQITAEVVSIAREWIFIDLGG------KSEGAVAKAE----FIDQEGNC 60 Query: 155 KVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQE----GMEVKGIVKNLTDYGAFVD 210 V D+ + ++ +L+E G+ V+G V+ G V Sbjct: 61 TVAVGDKVTVYFLAEKKQEKLFTTKVGGAATQAHLEEAYHSGIPVEGTVEAEGKGGFQVR 120 Query: 211 L-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVA 269 + G V + MA +RV++ E + G K+++F + L ++L E+ A Sbjct: 121 ISGNVRAFCPFSQMALRRVENNEEYL--GQGFAFKIIEFREGGRNIILSRRRLLEEERAA 178 Query: 270 ----IAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVG 325 + + G K+TG VT++ +G FV+I G+EGL+ +SE+ W + G Sbjct: 179 RKEELRQSLAVGDKVTGTVTSVQKFGAFVDIG-GIEGLIPMSEIGWG-TVEDIHSHLEPG 236 Query: 326 DVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDG 385 VEV+V +D E+ R SL LK +PW+ A +G R +GK+ + DFG F+ L Sbjct: 237 REVEVVVKSLDWEKERYSLSLKDTLPDPWEGVAARFPEGSRHQGKVARLMDFGAFVTLAP 296 Query: 386 GIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLG 432 GIDGLVH+S + + G+ + + +D+ER R+SL Sbjct: 297 GIDGLVHISKLGAGRRINHPREVVQPGETLEVEIEAIDSERRRLSLS 343 Score = 83.5 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 59/179 (32%), Gaps = 8/179 (4%) Query: 344 LGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGE 403 + + + E G ++ ++ SI IFI L G +G V ++ + Sbjct: 1 MSGFEELFAEHEAAGEKLTPGQQITAEVVSIAREWIFIDLGGKSEGAVAKAE----FIDQ 56 Query: 404 EAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDA 463 E GD++ L +++ K + G V G V A Sbjct: 57 EGNCTVAVGDKVTVYFLA--EKKQEKLFTTKVGGAATQAHLEEAYHSGIPVEGTVEAEGK 114 Query: 464 KGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAK 522 G V ++ V + S+ + RVE+ L G K R I LS R Sbjct: 115 GGFQVRISGNVRAFCPFSQMALRRVENNEEYL--GQGFAFKIIEFREGGRNIILSRRRL 171 >UniRef50_UPI0000F2B0DB PREDICTED: similar to KIAA0185 n=1 Tax=Monodelphis domestica RepID=UPI0000F2B0DB Length = 1773 Score = 303 bits (777), Expect = 8e-81, Method: Composition-based stats. Identities = 110/546 (20%), Positives = 201/546 (36%), Gaps = 27/546 (4%) Query: 10 EESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVD 69 E++ PG +V+ V + + + + + + Q V Sbjct: 270 EQNWTLDNLLPGLVVKAQVQKVTPYGLSLSFLSSFTGLVDFMHLDSKKTGHYFQT-QMVR 328 Query: 70 VALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETV--TGVING-KVKGGFTVEL-N 125 + +V L+ + + V + K G T L + Sbjct: 329 ACILSVHPRTKSVRLTLHSSFLQAGRPITRLCHHLIGAVLNDVPVQSFYTKAGATFRLKD 388 Query: 126 GIRAFLPGSLVD--VRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERD 183 G A+ + + + G +VI + ++S + I Sbjct: 389 GSLAYARIRHLSQTEKSFKPEKFKPGNLHRCRVIDFSPMDDLALLSLKTSIIEAPFL--- 445 Query: 184 QLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 ++Q G VKG V L YG V + + GL+ +A ++++P + V DE+ Sbjct: 446 -RYHDIQPGQIVKGKVFTLRSYGMIVKVTEQIKGLVPTLHLADVQIRNPQKKYRVQDEVK 504 Query: 243 VKVLKFDRERTRVSLGLKQLGED---PWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEG 299 +VL D E ++ + LK+ + P + K + G ++++ D GC V+ Sbjct: 505 CRVLMCDPENKKLLMTLKKTLVESSLPALTNYKEAKPDLQTHGFISSIKDCGCIVKFYND 564 Query: 300 VEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQ---- 355 V GLV E+ P +V VG VV+V VL + E+ R+ L + + Sbjct: 565 VRGLVPQREL-GAQPISAPEEVFYVGQVVKVTVLKSEPEQERMLLSFRLSNDKEMESTAQ 623 Query: 356 -QFAETHNKGDRVEGKIKSITDFGIFIGL-DGGIDGLVHLSDISWNVAGEEAVREYKKGD 413 Q G V+ K+K T+ G+ + + I L+ + +S NV + + + + Sbjct: 624 SQKKAMVKTGQLVDVKVKKKTEKGLEVSILPDDISALLPTTHLSDNVTNSQLLCYWLQAG 683 Query: 414 EIAAVVLQVDAERERISLGVKQL-----AEDPFNNWVALNKKGAIVTGKVTAVDAKGATV 468 +I VL + I L K + + G ++TG V ++ A G V Sbjct: 684 DILHKVLCLSHSDGHIVLCRKPALISAVESGQDPKVFSEFQPGMLLTGFVKSIKAYGIFV 743 Query: 469 ELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEK 528 + G+ G S S V + G V AK T VD + + + LS+R D + E Sbjct: 744 QFPSGLSGLAPKSALSDKFVTTISDHFVEGQTVVAKVTNVDEEKQRMLLSLRLSDVSQED 803 Query: 529 DAIATV 534 +++ Sbjct: 804 TTASSL 809 Score = 241 bits (615), Expect = 6e-62, Method: Composition-based stats. Identities = 100/577 (17%), Positives = 194/577 (33%), Gaps = 48/577 (8%) Query: 18 TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE---------------- 61 G + G V ++ +++ + A +A + Sbjct: 80 LSEGMRLLGCVKEVNNLELVISLPNDLWGYVQATNICDAYTKKLNEQVDREEPLEDLAPL 139 Query: 62 ---IQVGDEVDVAL---DAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGK 115 Q G V A+ + LS + A + +TG ++ Sbjct: 140 SKLFQPGMLVRCAVSSLKSTSKKNKSIKLSLNPKDVNGVLS--PAALKPGMLLTGTVDSV 197 Query: 116 VKGGFTVELN--GIRAFLPGS---LVDVRPVRDTLHLEGKELEFKVIKL--DQKRNNVVV 168 G+ V++ G +AFLP + + T G+ L + ++ + + Sbjct: 198 EDHGYLVDIGVGGTKAFLPWQKEQEYVKQKNKGTKLQVGQYLNCLIEEVKGNGGSVRLST 257 Query: 169 SRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVD-LGGVDGLLHITDMAWKR 227 + V + + E++ L+NL G+ VK V+ +T YG + L GL+ + K+ Sbjct: 258 IQSEVSAAIATEEQNWTLDNLLPGLVVKAQVQKVTPYGLSLSFLSSFTGLVDFMHLDSKK 317 Query: 228 VKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAK--RYPEGTKLTGRVT 285 H + +L V L L I + + G L Sbjct: 318 TGH---YFQT-QMVRACILSVHPRTKSVRLTLHSSFLQAGRPITRLCHHLIGAVLNDVPV 373 Query: 286 N--LTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRIS 343 T G +++G + + T K+ P K G++ V+D Sbjct: 374 QSFYTKAGATFRLKDGSLAYARIRHLSQTEKSFKPEK-FKPGNLHRCRVIDFSPMDDLAL 432 Query: 344 LGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGE 403 L LK G V+GK+ ++ +G+ + + I GLV ++ V Sbjct: 433 LSLKTSIIEAPFLRYHDIQPGQIVKGKVFTLRSYGMIVKVTEQIKGLVPTLHLAD-VQIR 491 Query: 404 EAVREYKKGDEIAAVVLQVDAERERISLGVKQLAED---PFNNWVALNKKGAIVTGKVTA 460 ++Y+ DE+ VL D E +++ + +K+ + P K G +++ Sbjct: 492 NPQKKYRVQDEVKCRVLMCDPENKKLLMTLKKTLVESSLPALTNYKEAKPDLQTHGFISS 551 Query: 461 VDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 + G V+ + V G + E + V VG V+ + + + LS R Sbjct: 552 IKDCGCIVKFYNDVRGLVPQRELGAQPISAPEEVFYVGQVVKVTVLKSEPEQERMLLSFR 611 Query: 521 AKDEADEKDAIATVNKQEDANFSNNAMAEAFKAAKGE 557 ++K+ +T Q+ A + + K E Sbjct: 612 LS---NDKEMESTAQSQKKAMVKTGQLVDVKVKKKTE 645 Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats. Identities = 83/532 (15%), Positives = 179/532 (33%), Gaps = 55/532 (10%) Query: 49 PAEQFKNAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETV 108 Q + + + + G+ + LLS + + ++ + + V Sbjct: 398 HLSQTEKSFKPEKFKPGNLHRCRVIDFSPMDDLALLSLKTSIIEAPFLRYHDI-QPGQIV 456 Query: 109 TGVINGKVKGGFTVEL-NGIRAFLPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNN 165 G + G V++ I+ +P + +R+ E++ +V+ D + Sbjct: 457 KGKVFTLRSYGMIVKVTEQIKGLVPTLHLADVQIRNPQKKYRVQDEVKCRVLMCDPENKK 516 Query: 166 VVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMA 224 ++++ + + + + + ++ G + ++ D G V V GL+ ++ Sbjct: 517 LLMTLKKTLVESSLPAL-TNYKEAKPDLQTHGFISSIKDCGCIVKFYNDVRGLVPQRELG 575 Query: 225 WKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGL-----KQLGEDPWVAIAKRYPEGTK 279 + + P E+ VG + V VLK + E+ R+ L K++ G Sbjct: 576 AQPISAPEEVFYVGQVVKVTVLKSEPEQERMLLSFRLSNDKEMESTAQSQKKAMVKTGQL 635 Query: 280 LTGRVTNLTDYGCFVEIEEG-VEGLVHVSEMDWTNKNIHPS-KVVNVGDVVEVMVLDIDE 337 + +V T+ G V I + L+ + + N + GD++ VL + Sbjct: 636 VDVKVKKKTEKGLEVSILPDDISALLPTTHLSDNVTNSQLLCYWLQAGDILH-KVLCLSH 694 Query: 338 ERRRISLGLKQCKANPWQ-----QFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVH 392 I L K + + + G + G +KSI +GIF+ G+ GL Sbjct: 695 SDGHIVLCRKPALISAVESGQDPKVFSEFQPGMLLTGFVKSIKAYGIFVQFPSGLSGLAP 754 Query: 393 LSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNK--- 449 S +S + +G + A V VD E++R+ L ++ + + Sbjct: 755 KSALSDKFVTT-ISDHFVEGQTVVAKVTNVDEEKQRMLLSLRLSDVSQEDTTASSLTLLS 813 Query: 450 ----------------------------KGAIVTGKVTAVDAKGATVELADGVEGYLRAS 481 G +V V + + G+ V V G + Sbjct: 814 QCLEELQGVRSLMSSRDSVLTQTLAEMTPGLLVDLVVQDMSSDGSLVFSNGSVPGLV--- 870 Query: 482 EASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIAT 533 + + G +A VD + + +S+R + + + Sbjct: 871 -LRASKYHQGGKAVDPGQRTKAVILHVDTQKSEVHVSLRQELVNRKVKQLKK 921 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 109/584 (18%), Positives = 200/584 (34%), Gaps = 80/584 (13%) Query: 6 AQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQF---KNAQGELEI 62 E +P G + +I +V +P + + E Sbjct: 527 ESSLPALTNYKEAKPDLQTHGFISSIKDCGCIVKFYNDVRGLVPQRELGAQPISAPEEVF 586 Query: 63 QVGDEVDVALDAVEDGFGETLLSRE----KAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 VG V V + E LLS K A + + + V + K + Sbjct: 587 YVGQVVKVTVLKSEPEQERMLLSFRLSNDKEMESTAQSQKKAMVKTGQLVDVKVKKKTEK 646 Query: 119 GFTVEL--NGIRAFLPGSLVDVRPVRDTLHL-----EGKELEFKVIKLDQKRNNVVVSRR 171 G V + + I A LP + + V ++ L G L KV+ L ++V+ R+ Sbjct: 647 GLEVSILPDDISALLPTTHLSD-NVTNSQLLCYWLQAGDILH-KVLCLSHSDGHIVLCRK 704 Query: 172 AVIESENSAERD-QLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVK 229 + S + +D ++ Q GM + G VK++ YG FV G+ GL + ++ K V Sbjct: 705 PALISAVESGQDPKVFSEFQPGMLLTGFVKSIKAYGIFVQFPSGLSGLAPKSALSDKFVT 764 Query: 230 HPSEIVNVGDEITVKVLKFDRERTRVSLGLK------------------QLGEDPWVAIA 271 S+ G + KV D E+ R+ L L+ Q E+ + Sbjct: 765 TISDHFVEGQTVVAKVTNVDEEKQRMLLSLRLSDVSQEDTTASSLTLLSQCLEELQGVRS 824 Query: 272 KRYPEGTKLTGRVTNLTDYGCFVEI---EEGVEGLVHVSEMDWTNKNIHPSKV------V 322 + LT + +T G V++ + +G + S + SK V Sbjct: 825 LMSSRDSVLTQTLAEMTP-GLLVDLVVQDMSSDGSLVFSNGSVPGLVLRASKYHQGGKAV 883 Query: 323 NVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIG 382 + G + ++L +D ++ + + L+Q N + + K I+ + Sbjct: 884 DPGQRTKAVILHVDTQKSEVHVSLRQELVN---RKVKQLKKDTEHRAVIEHLEKTFAIAS 940 Query: 383 L--DGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISL----GVKQL 436 L G + S ++ + + + G ++ ++ + L VK+ Sbjct: 941 LVETGQLIAFPVASHLNDTFRFD--SEKLQVGQGVSVIIKSTKPCDIGLFLAVESSVKKR 998 Query: 437 AED----------------PFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRA 480 G +VTG V ++ A V L +G+ GY+ A Sbjct: 999 TPALPSVAPESAGQDPGVVSELLEKPTLPIGEMVTGTVKSIKATHVIVTLENGLTGYIHA 1058 Query: 481 SEASRD--RVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAK 522 S+ D T L VG+ V A+ G + L+ ++ Sbjct: 1059 SQILDDVSHGTHPTTTLKVGNPVTARVIG-----QRTWLTHKSL 1097 Score = 121 bits (305), Expect = 5e-26, Method: Composition-based stats. Identities = 89/623 (14%), Positives = 194/623 (31%), Gaps = 98/623 (15%) Query: 15 EIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ---GELEIQVGDEVDVA 71 E +PG ++ G V +I + V P + G V Sbjct: 720 FSEFQPGMLLTGFVKSIKAYGIFVQFPSGLSGLAPKSALSDKFVTTISDHFVEGQTVVAK 779 Query: 72 LDAVEDGFGETLLSREKAKRHEA----------------WITLEKAYEDAETVTGVINGK 115 + V++ LLS + + + ++V + Sbjct: 780 VTNVDEEKQRMLLSLRLSDVSQEDTTASSLTLLSQCLEELQGVRSLMSSRDSVLTQTLAE 839 Query: 116 VKGGFTVEL-------NGIRAF----LPGSLVDVRPVRDTLHLE--GKELEFKVIKLDQK 162 + G V+L +G F +PG ++ G+ + ++ +D + Sbjct: 840 MTPGLLVDLVVQDMSSDGSLVFSNGSVPGLVLRASKYHQGGKAVDPGQRTKAVILHVDTQ 899 Query: 163 RNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGI--VKNLTDYGAFVDLGGVDGLLHI 220 ++ V VS R + + + + E+ ++ + +L + G + Sbjct: 900 KSEVHVSLRQELVNRKVKQLKKDTEHRAVIEHLEKTFAIASLVETGQLIAFPV------A 953 Query: 221 TDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSL----GLKQLGED----------- 265 + + SE + VG ++V + + L +K+ Sbjct: 954 SHLNDTFRFD-SEKLQVGQGVSVIIKSTKPCDIGLFLAVESSVKKRTPALPSVAPESAGQ 1012 Query: 266 -----PWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSE-MDWTNKNIHPS 319 + P G +TG V ++ V +E G+ G +H S+ +D + HP+ Sbjct: 1013 DPGVVSELLEKPTLPIGEMVTGTVKSIKATHVIVTLENGLTGYIHASQILDDVSHGTHPT 1072 Query: 320 KVVNVGDVVEVMVLD-----------IDEERRRISLGLKQCKANPWQQFA---------- 358 + VG+ V V+ I ++ + + ++ Sbjct: 1073 TTLKVGNPVTARVIGQRTWLTHKSLPISHPSSTQTVSELSIRPSELEKNISSDPSTQSSS 1132 Query: 359 -----ETHNKGDRVEGKIK--SITDFGIFIGLDGGIDGLVH--LSDISWNVAGEEAVREY 409 + + G V ++ ++ + + + I G + L+ +S+ ++ Sbjct: 1133 PTEKLKQYFPGQTVVCFMRKFNVIKKWLEVEITSDIRGRIPQLLTSLSFKTLALYVLQPP 1192 Query: 410 KKGDEIAAVVLQVDAERE---RISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGA 466 G + + + R + +K EDP + K+G ++ G V A+ +G Sbjct: 1193 LTGHAQSFKYYPLPSSSPLSSRTNPKMKSKIEDPEVTSMKDIKEGQLLRGYVEAIKKQGI 1252 Query: 467 TVELADGVEGYLRASEASRDRVEDA---TLVLSVGDEVEAKFTGVDRKNRAISLSVRAKD 523 ++ + G ++ + D L G + AK V+RK + LS KD Sbjct: 1253 FFRISPTLVGRVKYQHVTTYLPFDRALYQTYLPEGKLLSAKVLRVNRKQNLLYLSFLPKD 1312 Query: 524 EADEKDAIATVNKQEDANFSNNA 546 K+ Sbjct: 1313 TGKPDLLSNQPKKKRKLEQEEED 1335 Score = 118 bits (297), Expect = 5e-25, Method: Composition-based stats. Identities = 64/390 (16%), Positives = 125/390 (32%), Gaps = 37/390 (9%) Query: 162 KRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHI 220 K ++ +SE +E L EGM + G VK + + + L + G + Sbjct: 53 KNKRSKTEKKEPSKSEAEQSGILSIEVLSEGMRLLGCVKEVNNLELVISLPNDLWGYVQA 112 Query: 221 TDMAWKRVKHPSE----------------IVNVGDEITVKV---LKFDRERTRVSLGLKQ 261 T++ K +E + G + V ++ + L L Sbjct: 113 TNICDAYTKKLNEQVDREEPLEDLAPLSKLFQPGMLVRCAVSSLKSTSKKNKSIKLSL-N 171 Query: 262 LGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE-EGVEGLVHVSEMDWTNKNIHPSK 320 + V G LTG V ++ D+G V+I G + + + K + Sbjct: 172 PKDVNGVLSPAALKPGMLLTGTVDSVEDHGYLVDIGVGGTKAFLPWQKEQEYVKQKNKGT 231 Query: 321 VVNVGDVVEVMVLDIDEERRRISLGLKQCKA------NPWQQFAETHNKGDRVEGKIKSI 374 + VG + ++ ++ + L Q + + G V+ +++ + Sbjct: 232 KLQVGQYLNCLIEEVKGNGGSVRLSTIQSEVSAAIATEEQNWTLDNLLPGLVVKAQVQKV 291 Query: 375 TDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVK 434 T +G+ + GLV + G Y + + A +L V + + L + Sbjct: 292 TPYGLSLSFLSSFTGLVDFMHLDSKKTG-----HYFQTQMVRACILSVHPRTKSVRLTLH 346 Query: 435 QLAEDPFNNWV--ALNKKGAIV-TGKVTAV-DAKGATVELADGVEGYLRASEASRDRVED 490 + GA++ V + GAT L DG Y R S+ Sbjct: 347 SSFLQAGRPITRLCHHLIGAVLNDVPVQSFYTKAGATFRLKDGSLAYARIRHLSQTEKSF 406 Query: 491 ATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 G+ + + LS++ Sbjct: 407 KPEKFKPGNLHRCRVIDFSPMDDLALLSLK 436 Score = 67.7 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 45/291 (15%), Positives = 97/291 (33%), Gaps = 45/291 (15%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA-----QGELEIQVG 65 E L++ G +V G V +I V+V I A Q + ++VG Sbjct: 1019 ELLEKPTLPIGEMVTGTVKSIKATHVIVTLENGLTGYIHASQILDDVSHGTHPTTTLKVG 1078 Query: 66 DEVDVALD-------------------------AVEDGFGETLLSREKAKRHEAWITLEK 100 + V + ++ E +S + + + + K Sbjct: 1079 NPVTARVIGQRTWLTHKSLPISHPSSTQTVSELSIRPSELEKNISSDPSTQSSSPTEKLK 1138 Query: 101 AYEDAETVTGVIN--GKVKGGFTVEL-NGIRAFLPGSLVDVRPVRDTLHLE------GKE 151 Y +TV + +K VE+ + IR +P L + + G Sbjct: 1139 QYFPGQTVVCFMRKFNVIKKWLEVEITSDIRGRIPQLLTSLSF-KTLALYVLQPPLTGHA 1197 Query: 152 LEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL 211 FK + + ++S+ +++++EG ++G V+ + G F + Sbjct: 1198 QSFK-YYPLPSSSPLSSRTNPKMKSKIEDPEVTSMKDIKEGQLLRGYVEAIKKQGIFFRI 1256 Query: 212 -GGVDGLLHITDMAWKRVKHPS---EIVNVGDEITVKVLKFDRERTRVSLG 258 + G + + + + G ++ KVL+ +R++ + L Sbjct: 1257 SPTLVGRVKYQHVTTYLPFDRALYQTYLPEGKLLSAKVLRVNRKQNLLYLS 1307 Score = 58.0 bits (139), Expect = 9e-07, Method: Composition-based stats. Identities = 60/416 (14%), Positives = 119/416 (28%), Gaps = 61/416 (14%) Query: 14 KEIETRPGSIVRGVVVAIDKDVVLVDA--GLKSESAIPAEQFKN--AQGELEIQVGDEVD 69 K + + + R V+ ++K + + + A + ++QVG V Sbjct: 915 KVKQLKKDTEHRAVIEHLEKTFAIASLVETGQLIAFPVASHLNDTFRFDSEKLQVGQGVS 974 Query: 70 VALDAVEDGFGETLLSREKAKRHEAWITLEKA-------------------YEDAETVTG 110 V + + + L+ E + + A E VTG Sbjct: 975 VIIKSTKPCDIGLFLAVESSVKKRTPALPSVAPESAGQDPGVVSELLEKPTLPIGEMVTG 1034 Query: 111 VINGKVKGGFTVEL-NGIRAFLPGSLV----DVRPVRDTLHLEGKELEFKVIKLDQ---- 161 + V L NG+ ++ S + T G + +VI Sbjct: 1035 TVKSIKATHVIVTLENGLTGYIHASQILDDVSHGTHPTTTLKVGNPVTARVIGQRTWLTH 1094 Query: 162 ----------KRNNVVVSRRAVIESENSAERD--------QLLENLQEGMEVKGIVK--N 201 + +S R +N + + L+ G V ++ N Sbjct: 1095 KSLPISHPSSTQTVSELSIRPSELEKNISSDPSTQSSSPTEKLKQYFPGQTVVCFMRKFN 1154 Query: 202 LTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNV---GDEITVKV---LKFDRERTR 254 + V++ + G + + ++ G + K +R Sbjct: 1155 VIKKWLEVEITSDIRGRIPQLLTSLSFKTLALYVLQPPLTGHAQSFKYYPLPSSSPLSSR 1214 Query: 255 VSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNK 314 + +K EDP V K EG L G V + G F I + G V + Sbjct: 1215 TNPKMKSKIEDPEVTSMKDIKEGQLLRGYVEAIKKQGIFFRISPTLVGRVKYQHVTTYLP 1274 Query: 315 NIHP--SKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVE 368 + G ++ VL ++ ++ + L + K ++E Sbjct: 1275 FDRALYQTYLPEGKLLSAKVLRVNRKQNLLYLSFLPKDTGKPDLLSNQPKKKRKLE 1330 >UniRef50_Q14690 Protein RRP5 homolog n=24 Tax=Metazoa RepID=RRP5_HUMAN Length = 1871 Score = 301 bits (771), Expect = 5e-80, Method: Composition-based stats. Identities = 109/540 (20%), Positives = 198/540 (36%), Gaps = 36/540 (6%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDV 70 +S PG +V+ V + + ++ + + + V Sbjct: 271 QSWNLNNLLPGLVVKAQVQKVTPFGLTLNFLTFFTGVVDFMHL-DPKKAGTYFSNQAVRA 329 Query: 71 ALDAVEDGFGETLLSREKAKRHEAWITLEKAYED------AETVTGVINGKVKGGFTVEL 124 + V LS + ++ V G K G T L Sbjct: 330 CILCVHPRTRVVHLSLRPIFLQPGRPLTRLSCQNLGAVLDDVPVQGFFK---KAGATFRL 386 Query: 125 -NGIRAFLPGSLVDVRP-VRDTLHLE-GKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 +G+ A+ S + V + + G + ++I Q ++S R I Sbjct: 387 KDGVLAYARLSHLSDSKNVFNPEAFKPGNTHKCRIIDYSQMDELALLSLRTSIIEAQYL- 445 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSEIVNVGDE 240 +++ G VKG V + YG V +G GL+ +A +K+P + ++GDE Sbjct: 446 ---RYHDIEPGAVVKGTVLTIKSYGMLVKVGEQMRGLVPPMHLADILMKNPEKKYHIGDE 502 Query: 241 ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRY---PEGTKLTGRVTNLTDYGCFVEIE 297 + +VL D E ++ + LK+ + + + Y G + G + + DYGC V+ Sbjct: 503 VKCRVLLCDPEAKKLMMTLKKTLIESKLPVITCYADAKPGLQTHGFIIRVKDYGCIVKFY 562 Query: 298 EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQF 357 V+GLV E+ P +V G VV+V+VL+ + + R+ L K ++ Sbjct: 563 NNVQGLVPKHELSTEY-IPDPERVFYTGQVVKVVVLNCEPSKERMLLSFKLSSDPEPKKE 621 Query: 358 A--------ETHNKGDRVEGKIKSITDFGIFIG-LDGGIDGLVHLSDISWNVAGEEAVRE 408 + N G V+ K+ T G+ + L I + S +S +VA + Sbjct: 622 PAGHSQKKGKAINIGQLVDVKVLEKTKDGLEVAVLPHNIRAFLPTSHLSDHVANGPLLHH 681 Query: 409 YKKGDEIAAVVLQVDAERERISLGVKQL-----AEDPFNNWVALNKKGAIVTGKVTAVDA 463 + + +I VL + R+ L K + G ++ G V ++ Sbjct: 682 WLQAGDILHRVLCLSQSEGRVLLCRKPALVSTVEGGQDPKNFSEIHPGMLLIGFVKSIKD 741 Query: 464 KGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKD 523 G ++ G+ G + S V + G V AK T VD + + + LS+R D Sbjct: 742 YGVFIQFPSGLSGLAPKAIMSDKFVTSTSDHFVEGQTVAAKVTNVDEEKQRMLLSLRLSD 801 Score = 274 bits (700), Expect = 9e-72, Method: Composition-based stats. Identities = 95/582 (16%), Positives = 201/582 (34%), Gaps = 43/582 (7%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE----------- 59 E L G + G V +++ +++ + + + +A + Sbjct: 73 EILSVESLCEGMRILGCVKEVNELELVISLPNGLQGFVQVTEICDAYTKKLNEQVTQEQP 132 Query: 60 --------LEIQVGDEVDVALDAVE-DGFGETLLSREKAKRHEAWITLEKAYEDAETVTG 110 G V + ++ G+ + ++ + +A + +TG Sbjct: 133 LKDLLHLPELFSPGMLVRCVVSSLGITDRGKKSVKLSLNPKNVNRVLSAEALKPGMLLTG 192 Query: 111 VINGKVKGGFTVELN--GIRAFLP---GSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNN 165 ++ G+ V++ G RAFLP + + G+ L V K+ Sbjct: 193 TVSSLEDHGYLVDIGVDGTRAFLPLLKAQEYIRQKNKGAKLKVGQYLNCIVEKVKGNGGV 252 Query: 166 VVVS--RRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVD-LGGVDGLLHITD 222 V +S V + + ++ L NL G+ VK V+ +T +G ++ L G++ Sbjct: 253 VSLSVGHSEVSTAIATEQQSWNLNNLLPGLVVKAQVQKVTPFGLTLNFLTFFTGVVDFMH 312 Query: 223 MAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAK--RYPEGTKL 280 + K + + +L V L L+ + P + + G L Sbjct: 313 LD---PKKAGTYFS-NQAVRACILCVHPRTRVVHLSLRPIFLQPGRPLTRLSCQNLGAVL 368 Query: 281 TGRVTN--LTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEE 338 G +++GV +S + + +P + G+ + ++D + Sbjct: 369 DDVPVQGFFKKAGATFRLKDGVLAYARLSHLSDSKNVFNP-EAFKPGNTHKCRIIDYSQM 427 Query: 339 RRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISW 398 L L+ G V+G + +I +G+ + + + GLV ++ Sbjct: 428 DELALLSLRTSIIEAQYLRYHDIEPGAVVKGTVLTIKSYGMLVKVGEQMRGLVPPMHLAD 487 Query: 399 NVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVK---QLAEDPFNNWVALNKKGAIVT 455 + + ++Y GDE+ VL D E +++ + +K ++ P A K G Sbjct: 488 -ILMKNPEKKYHIGDEVKCRVLLCDPEAKKLMMTLKKTLIESKLPVITCYADAKPGLQTH 546 Query: 456 GKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAI 515 G + V G V+ + V+G + E S + + D V G V+ + + Sbjct: 547 GFIIRVKDYGCIVKFYNNVQGLVPKHELSTEYIPDPERVFYTGQVVKVVVLNCEPSKERM 606 Query: 516 SLSVRAKDEADEKDAIA--TVNKQEDANFSNNAMAEAFKAAK 555 LS + + + K A + K + N + + K Sbjct: 607 LLSFKLSSDPEPKKEPAGHSQKKGKAINIGQLVDVKVLEKTK 648 Score = 160 bits (406), Expect = 9e-38, Method: Composition-based stats. Identities = 104/603 (17%), Positives = 198/603 (32%), Gaps = 80/603 (13%) Query: 20 PGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGF 79 PG + VV + +D +V +G + + + E++ G + V + V+ Sbjct: 845 PGMFLDLVVQEVLEDGSVVFSGGPVPDLVLKAS-RYHRAGQEVESGQKKKVVILNVDLLK 903 Query: 80 GETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVR 139 E +S + + L K E V + VE + AF S ++ Sbjct: 904 LEVHVSLHQDLVNRKARKLRKGSEHQAIVQ-HLEKSFAIASLVETGHLAAFSLTSHLNDT 962 Query: 140 P---VRDTLHLEGKELEFKVIK-------LDQKRNNVVVSRRAVIESENSAERDQLLE-- 187 +G L K + L + + R + + + D+ ++ Sbjct: 963 FRFDSEKLQVGQGVSLTLKTTEPGVTGLLLAVEGPAAKRTMRPTQKDSETVDEDEEVDPA 1022 Query: 188 ---------NLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVK--HPSEIV 235 L G V G VK++ V L G+ G +H + + + P+ + Sbjct: 1023 LTVGTIKKHTLSIGDMVTGTVKSIKPTHVVVTLEDGIIGCIHASHILDDVPEGTSPTTKL 1082 Query: 236 NVGDEITVKVLK-FDRERTRV-------------SLGLKQLGEDPWVAI----------- 270 VG +T +V+ D + + L ++ + Sbjct: 1083 KVGKTVTARVIGGRDMKTFKYLPISHPRFVRTIPELSVRPSELEDGHTALNTHSVSPMEK 1142 Query: 271 AKRYPEGTKLTGRVT--NLTDYGCFVEIEEGVEGLVHVSEMDWTNKN-IHPSKVVNVGDV 327 K+Y G +T + N+ VEI + G + + + K HP K VG Sbjct: 1143 IKQYQAGQTVTCFLKKYNVVKKWLEVEIAPDIRGRIPLLLTSLSFKVLKHPDKKFRVGQA 1202 Query: 328 VEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDF-GIFIGLDGG 386 + V+ D + + L L +G+ G++ +T G+ + G Sbjct: 1203 LRATVVGPDSSKTLLCLSLTG---------PHKLEEGEVAMGRVVKVTPNEGLTVSFPFG 1253 Query: 387 IDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGV---------KQLA 437 G V + +S + E + ++ + +L ++L + K Sbjct: 1254 KIGTVSIFHMSDSY-SETPLEDFVPQKVVRCYILS--TADNVLTLSLRSSRTNPETKSKV 1310 Query: 438 EDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYL---RASEASRDRVEDATLV 494 EDP N + K+G ++ G V ++ G L V G S+ S + Sbjct: 1311 EDPEINSIQDIKEGQLLRGYVGSIQPHGVFFRLGPSVVGLARYSHVSQHSPSKKALYNKH 1370 Query: 495 LSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAA 554 L G + A+ ++ + + LS D A++ Q AE + Sbjct: 1371 LPEGKLLTARVLRLNHQKNLVELSFLPGDTGKPDVLSASLEGQLTKQEERKTEAEE-RDQ 1429 Query: 555 KGE 557 KGE Sbjct: 1430 KGE 1432 Score = 134 bits (338), Expect = 8e-30, Method: Composition-based stats. Identities = 103/604 (17%), Positives = 199/604 (32%), Gaps = 105/604 (17%) Query: 12 SLKEIETRPGSIVRGVVVAIDKDVVLVD-AGLKSESAIPAEQFKNAQGELEI-----QVG 65 K G +V V+ KD + V + +P + + Q G Sbjct: 627 QKKGKAINIGQLVDVKVLEKTKDGLEVAVLPHNIRAFLPTSHLSDHVANGPLLHHWLQAG 686 Query: 66 DEVDVALDAVEDGFGETLLSREKAKRHE----AWITLEKAYEDAETVTGVINGKVKGGFT 121 D + + + G LL R+ A + G + G Sbjct: 687 DILH-RVLCLSQSEGRVLLCRKPALVSTVEGGQDPKNFSEIHPGMLLIGFVKSIKDYGVF 745 Query: 122 VEL-NGIRAFLPGSLVDVRPVRDTLH--LEGKELEFKVIKLDQKRNNVVVSRR------- 171 ++ +G+ P +++ + V T +EG+ + KV +D+++ +++S R Sbjct: 746 IQFPSGLSGLAPKAIMSDKFVTSTSDHFVEGQTVAAKVTNVDEEKQRMLLSLRLSDCGLG 805 Query: 172 --------------------AVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL 211 + S + Q L + GM + +V+ + + G+ V Sbjct: 806 DLAITSLLLLNQCLEELQGVRSLMSNRDSVLIQTLAEMTPGMFLDLVVQEVLEDGSVV-F 864 Query: 212 GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIA 271 G G + + R + V G + V +L D + V + L +D A Sbjct: 865 SG--GPVPDLVLKASRYHRAGQEVESGQKKKVVILNVDLLKLEVHVSL---HQDLVNRKA 919 Query: 272 KRYPEGTKLTGRVTNLTDYGCFVEIEE--GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVE 329 ++ +G++ V +L + E + S ++ T + S+ + VG V Sbjct: 920 RKLRKGSEHQAIVQHLEKSFAIASLVETGHLAAFSLTSHLNDTFRFD--SEKLQVGQGVS 977 Query: 330 VMVLDIDEERRRISL---------GLKQCKANPWQ---------------QFAETHNKGD 365 + + + + L ++ + + T + GD Sbjct: 978 LTLKTTEPGVTGLLLAVEGPAAKRTMRPTQKDSETVDEDEEVDPALTVGTIKKHTLSIGD 1037 Query: 366 RVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVA-GEEAVREYKKGDEIAAVVL-QVD 423 V G +KSI + + L+ GI G +H S I +V G + K G + A V+ D Sbjct: 1038 MVTGTVKSIKPTHVVVTLEDGIIGCIHASHILDDVPEGTSPTTKLKVGKTVTARVIGGRD 1097 Query: 424 AERER---IS----------LGVKQLAEDPFN-----------NWVALNKKGAIVTGKVT 459 + + IS L V+ + + + + G VT + Sbjct: 1098 MKTFKYLPISHPRFVRTIPELSVRPSELEDGHTALNTHSVSPMEKIKQYQAGQTVTCFLK 1157 Query: 460 --AVDAKGATVELADGVEGYLR--ASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAI 515 V K VE+A + G + + S ++ VG + A G D + Sbjct: 1158 KYNVVKKWLEVEIAPDIRGRIPLLLTSLSFKVLKHPDKKFRVGQALRATVVGPDSSKTLL 1217 Query: 516 SLSV 519 LS+ Sbjct: 1218 CLSL 1221 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 82/409 (20%), Positives = 145/409 (35%), Gaps = 37/409 (9%) Query: 143 DTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNL 202 D EG K K K + + +R +S +E+L EGM + G VK + Sbjct: 34 DISTEEGSTKRKKSQKGPAKTKKLKIEKRESSKSAREKFEILSVESLCEGMRILGCVKEV 93 Query: 203 TDYGAFVDLG-GVDGLLHITDMAWKRVKHPS----------------EIVNVGDEITVKV 245 + + L G+ G + +T++ K + E+ + G + V Sbjct: 94 NELELVISLPNGLQGFVQVTEICDAYTKKLNEQVTQEQPLKDLLHLPELFSPGMLVRCVV 153 Query: 246 LKF---DRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE-EGVE 301 DR + V L L V A+ G LTG V++L D+G V+I +G Sbjct: 154 SSLGITDRGKKSVKLSL-NPKNVNRVLSAEALKPGMLLTGTVSSLEDHGYLVDIGVDGTR 212 Query: 302 GLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKA------NPWQ 355 + + + + + + VG + +V + +SL + + Sbjct: 213 AFLPLLKAQEYIRQKNKGAKLKVGQYLNCIVEKVKGNGGVVSLSVGHSEVSTAIATEQQS 272 Query: 356 QFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEI 415 G V+ +++ +T FG+ + G+V + AG Y + Sbjct: 273 WNLNNLLPGLVVKAQVQKVTPFGLTLNFLTFFTGVVDFMHLDPKKAG-----TYFSNQAV 327 Query: 416 AAVVLQVDAERERISLGVKQLAEDPFNNWVALN--KKGAIV-TGKVTAVDAK-GATVELA 471 A +L V + L ++ + P L+ GA++ V K GAT L Sbjct: 328 RACILCVHPRTRVVHLSLRPIFLQPGRPLTRLSCQNLGAVLDDVPVQGFFKKAGATFRLK 387 Query: 472 DGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 DGV Y R S S + G+ + + + + LS+R Sbjct: 388 DGVLAYARLSHLSDSKNVFNPEAFKPGNTHKCRIIDYSQMDELALLSLR 436 Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats. Identities = 73/400 (18%), Positives = 125/400 (31%), Gaps = 64/400 (16%) Query: 12 SLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE-----LEIQVGD 66 ++K+ G +V G V +I V+V I A + E +++VG Sbjct: 1027 TIKKHTLSIGDMVTGTVKSIKPTHVVVTLEDGIIGCIHASHILDDVPEGTSPTTKLKVGK 1086 Query: 67 EVDVALDAVEDGFGETLLSREKAKRHEAWITLE------------------------KAY 102 V + D L + L K Y Sbjct: 1087 TVTARVIGGRDMKTFKYLPISHPRFVRTIPELSVRPSELEDGHTALNTHSVSPMEKIKQY 1146 Query: 103 EDAETVTGVIN--GKVKGGFTVELN-GIRAFLPGSLVDVRPV----RDTLHLEGKELEFK 155 + +TVT + VK VE+ IR +P L + D G+ L Sbjct: 1147 QAGQTVTCFLKKYNVVKKWLEVEIAPDIRGRIPLLLTSLSFKVLKHPDKKFRVGQALRAT 1206 Query: 156 VIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDY-GAFVDLG-G 213 V+ D + + +S L+EG G V +T G V G Sbjct: 1207 VVGPDSSKTLLCLSL-------------TGPHKLEEGEVAMGRVVKVTPNEGLTVSFPFG 1253 Query: 214 VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGL---------KQLGE 264 G + I M+ + P E + +L ++L L K E Sbjct: 1254 KIGTVSIFHMSDSYSETPLEDFVPQKVVRCYILS--TADNVLTLSLRSSRTNPETKSKVE 1311 Query: 265 DPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHP--SKVV 322 DP + + EG L G V ++ +G F + V GL S + + + +K + Sbjct: 1312 DPEINSIQDIKEGQLLRGYVGSIQPHGVFFRLGPSVVGLARYSHVSQHSPSKKALYNKHL 1371 Query: 323 NVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHN 362 G ++ VL ++ ++ + L + + Sbjct: 1372 PEGKLLTARVLRLNHQKNLVELSFLPGDTGKPDVLSASLE 1411 Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 89/489 (18%), Positives = 161/489 (32%), Gaps = 82/489 (16%) Query: 14 KEIETRPGSIVRGVVVAIDKDVVLVDA--GLKSESAIPAEQFKN--AQGELEIQVGDEVD 69 K + R GS + +V ++K + + + ++QVG V Sbjct: 918 KARKLRKGSEHQAIVQHLEKSFAIASLVETGHLAAFSLTSHLNDTFRFDSEKLQVGQGVS 977 Query: 70 VALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAET---------------------- 107 + L E G LL+ E +K E + Sbjct: 978 LTLKTTEPGVTGLLLAVEGPAAKRTMRPTQKDSETVDEDEEVDPALTVGTIKKHTLSIGD 1037 Query: 108 -VTGVINGKVKGGFTVEL-NGIRAFLPGSLVDVRPVRDTLH----LEGKELEFKVI---K 158 VTG + V L +GI + S + T GK + +VI Sbjct: 1038 MVTGTVKSIKPTHVVVTLEDGIIGCIHASHILDDVPEGTSPTTKLKVGKTVTARVIGGRD 1097 Query: 159 LDQKRNNVVVSRRAVIESENSAERD------------------QLLENLQEGMEVKGIVK 200 + + + R V + R + ++ Q G V +K Sbjct: 1098 MKTFKYLPISHPRFVRTIPELSVRPSELEDGHTALNTHSVSPMEKIKQYQAGQTVTCFLK 1157 Query: 201 --NLTDYGAFVDL-GGVDGLLHI--TDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRV 255 N+ V++ + G + + T +++K +KHP + VG + V+ D +T + Sbjct: 1158 KYNVVKKWLEVEIAPDIRGRIPLLLTSLSFKVLKHPDKKFRVGQALRATVVGPDSSKTLL 1217 Query: 256 SLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDY-GCFVEIEEGVEGLVHVSEMDWTNK 314 L L + EG GRV +T G V G G V + M + Sbjct: 1218 CLSL---------TGPHKLEEGEVAMGRVVKVTPNEGLTVSFPFGKIGTVSIFHMSDSYS 1268 Query: 315 NIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCK---------ANPWQQFAETHNKGD 365 V VV +L ++L L+ + +P + +G Sbjct: 1269 ETPLEDFVPQ-KVVRCYILS--TADNVLTLSLRSSRTNPETKSKVEDPEINSIQDIKEGQ 1325 Query: 366 RVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEA--VREYKKGDEIAAVVLQVD 423 + G + SI G+F L + GL S +S + ++A + +G + A VL+++ Sbjct: 1326 LLRGYVGSIQPHGVFFRLGPSVVGLARYSHVSQHSPSKKALYNKHLPEGKLLTARVLRLN 1385 Query: 424 AERERISLG 432 ++ + L Sbjct: 1386 HQKNLVELS 1394 Score = 43.4 bits (101), Expect = 0.024, Method: Composition-based stats. Identities = 11/81 (13%), Positives = 20/81 (24%), Gaps = 6/81 (7%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQG------ELEIQV 64 E + + G ++RG V +I V G + Sbjct: 1314 EINSIQDIKEGQLLRGYVGSIQPHGVFFRLGPSVVGLARYSHVSQHSPSKKALYNKHLPE 1373 Query: 65 GDEVDVALDAVEDGFGETLLS 85 G + + + LS Sbjct: 1374 GKLLTARVLRLNHQKNLVELS 1394 >UniRef50_UPI000194C80A PREDICTED: programmed cell death 11 n=2 Tax=Taeniopygia guttata RepID=UPI000194C80A Length = 1885 Score = 300 bits (769), Expect = 8e-80, Method: Composition-based stats. Identities = 111/573 (19%), Positives = 213/573 (37%), Gaps = 43/573 (7%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDV 70 ++ PG +V+ V + + V + + + + V Sbjct: 324 QNWTLSNLLPGLVVKARVQKVFPLGMKVTFLSYFTGIVDFMH-TDPEKSMSYSPDQVVKA 382 Query: 71 ALDAVEDGFG--ETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVK-GGFTVELN-G 126 + +V L A L A + K G EL+ G Sbjct: 383 CVLSVHPTSRAVRLTLRPPFLHAGGAPRQLPAQRMGAVVEEATVKAFYKQFGAIFELDDG 442 Query: 127 IRAFLPGSLVD--VRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQ 184 AF + + + EG + + ++I +VS + I + Sbjct: 443 TLAFARLKHLSKTRKSFKPGAFQEGCKHKCRIIAYSLMDEMCIVSLKHQIIEARFLQ--- 499 Query: 185 LLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITV 243 +++ G V+G V +L G V + G+ GL+ ++ +K P + N+GDE+ Sbjct: 500 -YQDIHTGDVVQGKVLSLKPIGMQVKVADGIRGLVPSLHLSDVILKQPEKKYNIGDEVKC 558 Query: 244 KVLKFDRERTRVSLGLKQLGEDPWVAIAKRY---PEGTKLTGRVTNLTDYGCFVEIEEGV 300 +VL+ + E ++ L LK+ + + Y G G V ++GC V+ V Sbjct: 559 RVLECNPEGKKLILTLKKSLVQSKLPVLSNYEDAKPGLITHGFVVCAREFGCIVKFYNDV 618 Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLK---------QCKA 351 +GLV +E+ + P KV G V++VMVL + ++ R+ L + + K Sbjct: 619 KGLVPKNEL-GSEPISCPDKVFYEGQVLKVMVLKCEPQQERLLLSFRLSSKPGPEDKWKC 677 Query: 352 NPWQQFAETHNKGDRVEGKIKSITDFGIFIGL---DGGIDGLVHLSDISWNVAGEEAVRE 408 P ++ + G+ V+ +I D G+ + + + + + + +S V + + Sbjct: 678 TPKEKQEVKYQIGEIVDVRILKKKDNGLEVSILEDEDNVVAWIPMLHLSDFVDISKLLWH 737 Query: 409 YKKGDEIAAVVLQVDAERERISLGVKQL-----AEDPFNNWVALNKKGAIVTGKVTAVDA 463 + ++ VL + A+ E + L K E+ + + G ++TG V V Sbjct: 738 CLREGDVLPRVLYLSAKGEHLILSRKSAVISAVQEEKVVRNFSEIQPGMLLTGYVRNVMP 797 Query: 464 KGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKD 523 G VE GV G S V D VG V AK D + + + L+++ Sbjct: 798 FGVFVEFPFGVTGLAPKVSMSDKFVTDTKDHFVVGQTVIAKVMSTDEEKQRVLLNLK--- 854 Query: 524 EADEKDAIATVNKQEDANFSNNAMAEAFKAAKG 556 ++ + + A+ S + + + FK K Sbjct: 855 -------VSECSSGDSASESFDLLNQYFKELKE 880 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 95/581 (16%), Positives = 194/581 (33%), Gaps = 46/581 (7%) Query: 13 LKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE------------- 59 L G ++ G + + + + +P Q +A + Sbjct: 128 LTVEALSEGMLLLGCIKEVSDYELAISLPNGLSGFVPVTQISDAYSKLLTKQVAQGEVPE 187 Query: 60 ------LEIQVGDEVDVALDAVED-GFGETLLSREKAKRHEAWITLEKAYEDAETVTGVI 112 G V + +VE G + A ++G + Sbjct: 188 ELNSLPDIFSPGTLVRCIVTSVEKSDDGRRSVKLSIDPEKVNKGLNSAALTAGMVLSGSV 247 Query: 113 NGKVKGGFTVELN--GIRAFLPGSLVDVRPVRDTLH----LEGKELEFKVIKLDQKRNNV 166 G+ +++ G AFLP ++ G+ L ++++ + V Sbjct: 248 LSVEDHGYLIDIGIAGTHAFLP-HQKAKNYIKAVKKGPDLKIGQNLNCLIVEVKNEGRVV 306 Query: 167 VV--SRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVD-LGGVDGLLHITDM 223 + R V S + ++ L NL G+ VK V+ + G V L G++ Sbjct: 307 SLSIDRSEVAASIATERQNWTLSNLLPGLVVKARVQKVFPLGMKVTFLSYFTGIVDFMHT 366 Query: 224 AWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPE--GTKL- 280 ++ + + VL V L L+ A + + G + Sbjct: 367 DPEKSMS----YSPDQVVKACVLSVHPTSRAVRLTLRPPFLHAGGAPRQLPAQRMGAVVE 422 Query: 281 TGRVTNLTD-YGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEER 339 V +G E+++G + + T K+ P G + ++ Sbjct: 423 EATVKAFYKQFGAIFELDDGTLAFARLKHLSKTRKSFKPG-AFQEGCKHKCRIIAYSLMD 481 Query: 340 RRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWN 399 + LK + + GD V+GK+ S+ G+ + + GI GLV +S Sbjct: 482 EMCIVSLKHQIIEARFLQYQDIHTGDVVQGKVLSLKPIGMQVKVADGIRGLVPSLHLSD- 540 Query: 400 VAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQ---LAEDPFNNWVALNKKGAIVTG 456 V ++ ++Y GDE+ VL+ + E +++ L +K+ ++ P + K G I G Sbjct: 541 VILKQPEKKYNIGDEVKCRVLECNPEGKKLILTLKKSLVQSKLPVLSNYEDAKPGLITHG 600 Query: 457 KVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAIS 516 V G V+ + V+G + +E + + V G ++ + + + Sbjct: 601 FVVCAREFGCIVKFYNDVKGLVPKNELGSEPISCPDKVFYEGQVLKVMVLKCEPQQERLL 660 Query: 517 LSVR-AKDEADEKDAIATVNKQEDANFSNNAMAE--AFKAA 554 LS R + E T ++++ + + + K Sbjct: 661 LSFRLSSKPGPEDKWKCTPKEKQEVKYQIGEIVDVRILKKK 701 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 91/557 (16%), Positives = 199/557 (35%), Gaps = 44/557 (7%) Query: 9 FEESLKEIETRPGSIVRGVVVAIDKDVVLVDAG-LKSESAIP----AEQFKNAQGELEIQ 63 + L G ++ G V++++ L+D G + + +P K + +++ Sbjct: 228 VNKGLNSAALTAGMVLSGSVLSVEDHGYLIDIGIAGTHAFLPHQKAKNYIKAVKKGPDLK 287 Query: 64 VGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAE-----TVTGVINGKVKG 118 +G ++ + V++ LS ++++ + T + + + V + Sbjct: 288 IGQNLNCLIVEVKNEGRVVSLSIDRSEVAASIATERQNWTLSNLLPGLVVKARVQKVFPL 347 Query: 119 GFTV----ELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVI 174 G V GI F+ P + + + ++ V+ + V ++ R Sbjct: 348 GMKVTFLSYFTGIVDFMH-----TDPEKSMSYSPDQVVKACVLSVHPTSRAVRLTLRPPF 402 Query: 175 ESENSAERDQLLENLQEGMEV-KGIVKN-LTDYGAFVDL-GGVDGLLHITDMAWKRVKHP 231 A R + + G V + VK +GA +L G + ++ R Sbjct: 403 LHAGGAPRQLPAQRM--GAVVEEATVKAFYKQFGAIFELDDGTLAFARLKHLSKTRKSFK 460 Query: 232 SEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYG 291 G + +++ + + LK + + G + G+V +L G Sbjct: 461 PGAFQEGCKHKCRIIAYSLMDEMCIVSLKHQIIEARFLQYQDIHTGDVVQGKVLSLKPIG 520 Query: 292 CFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKA 351 V++ +G+ GLV + P K N+GD V+ VL+ + E +++ L LK+ Sbjct: 521 MQVKVADGIRGLVPSLHLSD-VILKQPEKKYNIGDEVKCRVLECNPEGKKLILTLKKSLV 579 Query: 352 N---PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVRE 408 P E G G + +FG + + GLV +++ + Sbjct: 580 QSKLPVLSNYEDAKPGLITHGFVVCAREFGCIVKFYNDVKGLVPKNELGSEPISC-PDKV 638 Query: 409 YKKGDEIAAVVLQVDAERERISLGVKQLAED---------PFNNWVALNKKGAIVTGKVT 459 + +G + +VL+ + ++ER+ L + ++ P + G IV ++ Sbjct: 639 FYEGQVLKVMVLKCEPQQERLLLSFRLSSKPGPEDKWKCTPKEKQEVKYQIGEIVDVRIL 698 Query: 460 AVDAKGATVEL---ADGVEGYLRASEASR--DRVEDATLVLSVGDEVEAKFTGVDRKNRA 514 G V + D V ++ S D + L GD + + + K Sbjct: 699 KKKDNGLEVSILEDEDNVVAWIPMLHLSDFVDISKLLWHCLREGDVLP-RVLYLSAKGEH 757 Query: 515 ISLSVRAKDEADEKDAI 531 + LS ++ + ++ Sbjct: 758 LILSRKSAVISAVQEEK 774 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 114/655 (17%), Positives = 211/655 (32%), Gaps = 116/655 (17%) Query: 2 TESFAQLFEESLKEI---------------ETRPGSIVRGVVVAIDKDVVLVDAGLKSES 46 +ESF L + KE+ E PG V VV + +D + +G Sbjct: 865 SESF-DLLNQYFKELKEIRDLLRRGEPSICELVPGKRVHLVVQDVREDGSALFSGSPVTG 923 Query: 47 AIPAEQFKNAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAE 106 + + G+ I G++ V + V+ E +S + + + Sbjct: 924 -LTVTATRYHLGDKNIAPGEKRKVLVLHVDALTSEVYVSLREELLKQRPKRRLRENSQHS 982 Query: 107 TVTGVINGKVKGGFTVEL--NGIRAFLPGS-LVDVRPVRDTLHL-EGKELEFKVIKLDQK 162 V + + L G A +P + + D+ L G+++ + + + Sbjct: 983 VV---VQHITEHFAIASLLETGQLAAVPIACHFNDTFRFDSEKLRVGQKISATLKAVKEN 1039 Query: 163 RN------------NVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVD 210 + NV V R E+ + +L G V G VK++ V Sbjct: 1040 NHGVLLAVQGPAKKNVFVRVRNESETALEEVLPAVKHSLSPGDVVTGTVKSVKPTHVTVA 1099 Query: 211 LGG-VDGLLHITDMAWKRV--KHPSEIVNVGDEITVKVLK-FDRERTRV----------- 255 + + G +H + + + P+ + G ++T +V+ D R Sbjct: 1100 IDDKLTGSIHASRILDEVPIGSFPTSTLQAGQKVTARVIGGRDVNTHRCLPITHPHFTQS 1159 Query: 256 --SLGLKQLGEDPWVAIAKRYP------------EGTKLTGRVTNLT--DYGCFVEIEEG 299 L ++ ++ G +T V VE+ Sbjct: 1160 IPELSIRPSEQEGEFTAMLNLKEESSLKQLGLYNVGQTVTCFVKKYNMLKNWLEVEVAPD 1219 Query: 300 VEGLVHVSEMDWTNKN-IHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFA 358 + G V + + K HP K G + V D R + L L + Sbjct: 1220 IRGRVPHLLLSLSTKVLKHPEKSFKNGQAISATVTGTDATERNLCLSLTGIQ-------- 1271 Query: 359 ETHNKGDRVEGKIKSITDF-GIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAA 417 + + G + +T G+ I L GG G V + ++ + + +K G + Sbjct: 1272 -SLEQDTISVGMVTKVTPHVGLTIALPGGKTGKVSIFHLNDTYT-DNPLGNFKVGKIVRC 1329 Query: 418 VVLQVDAERERISLGVKQLAEDPFNNW---------VALNKKGAIVTGKVTAVDAKGATV 468 +L + E +I L ++Q +P N + KKG +V G V ++ G Sbjct: 1330 YILSI--ENGKIQLSLRQSRLNPKINSKVEDIEITSIKDVKKGQLVRGYVKSITPSGVFF 1387 Query: 469 ELADGVEGYLRASEASRDRVED---ATLVLSVGDEVEAKFTGVDRKNRAISLSV------ 519 L+ + G + S V+ L G + AK GV+RK + I LS+ Sbjct: 1388 GLSTSLLGRILFQNVSPYFVQKHSLYKKYLPEGKLLTAKVLGVNRKEKHIELSLLPEDTG 1447 Query: 520 -----------------RAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAAKGE 557 + K EAD ++ + N+ + K K + Sbjct: 1448 MPSVLPESLGLPQYGAEKEKREADYEEKREQPKMKTKRRRGNDESGQEAKPKKRK 1502 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 79/525 (15%), Positives = 169/525 (32%), Gaps = 57/525 (10%) Query: 54 KNAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVIN 113 K+ + + + V A+ G + +A + + G I Sbjct: 100 KDQEKQKRFKADKTVKAAVKDNVMNIGPLTV---------------EALSEGMLLLGCIK 144 Query: 114 GKVKGGFTVEL-NGIRAFLPGSLVDVRPVRDTLHLE------------------GKELEF 154 + L NG+ F+P + + + G + Sbjct: 145 EVSDYELAISLPNGLSGFVPVTQISDAYSKLLTKQVAQGEVPEELNSLPDIFSPGTLVRC 204 Query: 155 KVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-- 212 V +++ + + + L GM + G V ++ D+G +D+G Sbjct: 205 IVTSVEKSDDGRRSV--KLSIDPEKVNKGLNSAALTAGMVLSGSVLSVEDHGYLIDIGIA 262 Query: 213 GVDGLLHITDMAWKRVKHPSEI--VNVGDEITVKVLKFDRERTRVSLGLKQLGEDP---- 266 G L A +K + + +G + +++ E VSL + + Sbjct: 263 GTHAFLP-HQKAKNYIKAVKKGPDLKIGQNLNCLIVEVKNEGRVVSLSIDRSEVAASIAT 321 Query: 267 --WVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNV 324 G + RV + G V G+V + T+ S + Sbjct: 322 ERQNWTLSNLLPGLVVKARVQKVFPLGMKVTFLSYFTGIV---DFMHTDPEKSMS--YSP 376 Query: 325 GDVVEVMVLDIDEERRRISLGLKQCKANP--WQQFAETHNKGDRVE-GKIKSI-TDFGIF 380 VV+ VL + R + L L+ + + G VE +K+ FG Sbjct: 377 DQVVKACVLSVHPTSRAVRLTLRPPFLHAGGAPRQLPAQRMGAVVEEATVKAFYKQFGAI 436 Query: 381 IGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDP 440 LD G L +S + +++G + ++ E + +K + Sbjct: 437 FELDDGTLAFARLKHLSKTRKSFKPG-AFQEGCKHKCRIIAYSLMDEMCIVSLKHQIIEA 495 Query: 441 FNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDE 500 G +V GKV ++ G V++ADG+ G + + S ++ ++GDE Sbjct: 496 RFLQYQDIHTGDVVQGKVLSLKPIGMQVKVADGIRGLVPSLHLSDVILKQPEKKYNIGDE 555 Query: 501 VEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNN 545 V+ + + + + + L+++ + ++ + ++ Sbjct: 556 VKCRVLECNPEGKKLILTLKKSLVQSKLPVLSNYEDAKPGLITHG 600 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 95/596 (15%), Positives = 196/596 (32%), Gaps = 95/596 (15%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAG---LKSESAIPAEQFKNA-QGELEI---- 62 + +E++ + G IV ++ + + V + IP + + Sbjct: 680 KEKQEVKYQIGEIVDVRILKKKDNGLEVSILEDEDNVVAWIPMLHLSDFVDISKLLWHCL 739 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAET---VTGVINGKVKGG 119 + GD + L G L + + + + + + +TG + + G Sbjct: 740 REGDVLPRVLYLSAKGEHLILSRKSAVISAVQEEKVVRNFSEIQPGMLLTGYVRNVMPFG 799 Query: 120 FTVEL-NGIRAFLPGSLVDVRPVRDTLH--LEGKELEFKVIKLDQKRNNVVVSRR----- 171 VE G+ P + + V DT + G+ + KV+ D+++ V+++ + Sbjct: 800 VFVEFPFGVTGLAPKVSMSDKFVTDTKDHFVVGQTVIAKVMSTDEEKQRVLLNLKVSECS 859 Query: 172 ----------------AVIESENSAER--DQLLENLQEGMEVKGIVKNLTDYG-AFVDLG 212 ++ R + + L G V +V+++ + G A Sbjct: 860 SGDSASESFDLLNQYFKELKEIRDLLRRGEPSICELVPGKRVHLVVQDVREDGSALFSGS 919 Query: 213 GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAK 272 V GL + R + + G++ V VL D + V + L+ E + Sbjct: 920 PVTGL----TVTATRYHLGDKNIAPGEKRKVLVLHVDALTSEVYVSLR--EELLKQRPKR 973 Query: 273 RYPEGTKLTGRVTNLTDYGCFVEI-EEGVEGLVHV-SEMDWTNKNIHPSKVVNVGDVVEV 330 R E ++ + V ++T++ + E G V + + T + S+ + VG + Sbjct: 974 RLRENSQHSVVVQHITEHFAIASLLETGQLAAVPIACHFNDTFRFD--SEKLRVGQKISA 1031 Query: 331 MVLDIDEERRRISLGLK----------------QCKANPWQQFAETHNKGDRVEGKIKSI 374 + + E + L ++ + + GD V G +KS+ Sbjct: 1032 TLKAVKENNHGVLLAVQGPAKKNVFVRVRNESETALEEVLPAVKHSLSPGDVVTGTVKSV 1091 Query: 375 TDFGIFIGLDGGIDGLVHLSDISWNVAGEE-AVREYKKGDEIAAVVL-QVDAERER---- 428 + + +D + G +H S I V + G ++ A V+ D R Sbjct: 1092 KPTHVTVAIDDKLTGSIHASRILDEVPIGSFPTSTLQAGQKVTARVIGGRDVNTHRCLPI 1151 Query: 429 ---------ISLGVKQLAEDPFNNWVALNK------------KGAIVTGKVTA--VDAKG 465 L ++ ++ + K G VT V + Sbjct: 1152 THPHFTQSIPELSIRPSEQEGEFTAMLNLKEESSLKQLGLYNVGQTVTCFVKKYNMLKNW 1211 Query: 466 ATVELADGVEGYLRA--SEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSV 519 VE+A + G + S ++ G + A TG D R + LS+ Sbjct: 1212 LEVEVAPDIRGRVPHLLLSLSTKVLKHPEKSFKNGQAISATVTGTDATERNLCLSL 1267 >UniRef50_B0MQU3 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B0MQU3_9FIRM Length = 658 Score = 298 bits (763), Expect = 4e-79, Method: Composition-based stats. Identities = 124/350 (35%), Positives = 201/350 (57%), Gaps = 6/350 (1%) Query: 4 SFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK---NAQGEL 60 F +++ K + G+ V+ +VVA++K+ +VD G K IPA + NA Sbjct: 297 DFMAEVDKTFK--KVYIGNRVKALVVAVNKNEAVVDLGTKHSGYIPASELSQDPNAAPSD 354 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 ++VGDE++ + AV D G LS++K L A E+ ET+ G ++ VKGG Sbjct: 355 VVKVGDEIEAIVTAVNDAEGTVTLSKKKVDSVLGVEKLAAAMENNETLEGEVSSVVKGGV 414 Query: 121 TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 + NG R F+P S V L K + FKVI++ + R VV S R + N A Sbjct: 415 IIISNGTRVFIPASQTGVPKDGKLEELLKKTVPFKVIEVTEARGRVVGSIRQAKKEANDA 474 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 + + EN++ G + G VK++ YG FVDLGGVDG++H +++ W R+KHP EIV +GD+ Sbjct: 475 AKAKFWENIEVGQKFTGEVKSIESYGVFVDLGGVDGMVHSSELTWNRIKHPREIVKIGDK 534 Query: 241 ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV 300 + V V FD E+ RVSLG K+ ++PW Y EG + + ++T +G F +I GV Sbjct: 535 LDVYVKSFDPEKKRVSLGCKKEEDNPWNKFVAEYSEGDVVDVTIVSITPFGAFAQIIPGV 594 Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCK 350 +GL+H+S++ T + + ++V+++GD V+ +++I+EE+ R+SL ++ K Sbjct: 595 DGLIHISQIS-TERINNVAQVLSIGDEVKAKIIEINEEQNRVSLSIRALK 643 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 97/347 (27%), Positives = 173/347 (49%), Gaps = 12/347 (3%) Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSEIVNVGDEI 241 D+ + + G VK +V + A VDLG G + ++++ PS++V VGDEI Sbjct: 303 DKTFKKVYIGNRVKALVVAVNKNEAVVDLGTKHSGYIPASELSQDPNAAPSDVVKVGDEI 362 Query: 242 TVKVLKFDRERTRVSLGLKQLGEDPW-VAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV 300 V + V+L K++ +A L G V+++ G + I G Sbjct: 363 EAIVTAVNDAEGTVTLSKKKVDSVLGVEKLAAAMENNETLEGEVSSVVKGGVII-ISNGT 421 Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQ----Q 356 + S+ K+ +++ V V+++ E R R+ ++Q K + Sbjct: 422 RVFIPASQ-TGVPKDGKLEELLK--KTVPFKVIEVTEARGRVVGSIRQAKKEANDAAKAK 478 Query: 357 FAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIA 416 F E G + G++KSI +G+F+ L GG+DG+VH S+++WN + K GD++ Sbjct: 479 FWENIEVGQKFTGEVKSIESYGVFVDL-GGVDGMVHSSELTWNRI-KHPREIVKIGDKLD 536 Query: 417 AVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEG 476 V D E++R+SLG K+ ++P+N +VA +G +V + ++ GA ++ GV+G Sbjct: 537 VYVKSFDPEKKRVSLGCKKEEDNPWNKFVAEYSEGDVVDVTIVSITPFGAFAQIIPGVDG 596 Query: 477 YLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKD 523 + S+ S +R+ + VLS+GDEV+AK ++ + +SLS+RA Sbjct: 597 LIHISQISTERINNVAQVLSIGDEVKAKIIEINEEQNRVSLSIRALK 643 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 53/281 (18%), Positives = 123/281 (43%), Gaps = 11/281 (3%) Query: 272 KRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVM 331 K+ G ++ V + V++ G + SE+ N PS VV VGD +E + Sbjct: 307 KKVYIGNRVKALVVAVNKNEAVVDLGTKHSGYIPASELSQD-PNAAPSDVVKVGDEIEAI 365 Query: 332 VLDIDEERRRISLGLKQCK-ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGL 390 V +++ ++L K+ ++ A + +EG++ S+ G+ I + G Sbjct: 366 VTAVNDAEGTVTLSKKKVDSVLGVEKLAAAMENNETLEGEVSSVVKGGVII-ISNGTRVF 424 Query: 391 VHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGV----KQLAEDPFNNWVA 446 + S G+ K + V++V R R+ + K+ + + Sbjct: 425 IPASQTGVPKDGK-LEELLK--KTVPFKVIEVTEARGRVVGSIRQAKKEANDAAKAKFWE 481 Query: 447 LNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFT 506 + G TG+V ++++ G V+L GV+G + +SE + +R++ ++ +GD+++ Sbjct: 482 NIEVGQKFTGEVKSIESYGVFVDLG-GVDGMVHSSELTWNRIKHPREIVKIGDKLDVYVK 540 Query: 507 GVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAM 547 D + + +SL + +++ +A ++ + + + ++ Sbjct: 541 SFDPEKKRVSLGCKKEEDNPWNKFVAEYSEGDVVDVTIVSI 581 >UniRef50_P50889 40S ribosomal protein S1 n=37 Tax=Bacilli RepID=RS1_LEULA Length = 429 Score = 298 bits (762), Expect = 5e-79, Method: Composition-based stats. Identities = 123/365 (33%), Positives = 207/365 (56%), Gaps = 15/365 (4%) Query: 1 MTE---SFAQLFEESLKEIETRPGSIVRGVVVAID-KDVVLVDAGLKSESAIPAEQFKNA 56 M+E F E + + G +V G ++AID + +V E +PA ++ + Sbjct: 34 MSETNNEFLAALES--AADQIKVGDVVTGELLAIDNDNQAVVGLSTGEEGVVPAREYSDD 91 Query: 57 ---QGELEIQVGDEVDVALDA---VEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTG 110 E+++GD ++ + + + LLS+++ +AW L ++ + +TV Sbjct: 92 RNINLADELKIGDTIEAVVISNVTSDKEGVAYLLSKKRLDARKAWENL--SFAEGDTVDA 149 Query: 111 VINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSR 170 + V+GG V++NG+R F+P S+V R V D + K+++ +VI++D +++SR Sbjct: 150 KVINAVRGGLIVDVNGVRGFVPASMVAERFVSDLNQFKNKDIKAQVIEIDPANARLILSR 209 Query: 171 RAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKH 230 +AV E +A+ ++ L G V+G V LTD+GAFVDLGGVDGL+H+++++ RVK+ Sbjct: 210 KAVAAQELAAQLAEVFSKLSVGEVVEGTVARLTDFGAFVDLGGVDGLVHVSEISHDRVKN 269 Query: 231 PSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDY 290 P++++ GD++ VK+L D E+ R+SL +K PW A + G+ L G V + D+ Sbjct: 270 PADVLTKGDKVDVKILALDTEKGRISLSIKATQRGPWDEAADQIAAGSVLEGTVKRVKDF 329 Query: 291 GCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCK 350 G FVEI G+EGLVHVS++ + +PS+V+ GD V+V VLDI RISL +K + Sbjct: 330 GAFVEILPGIEGLVHVSQIS-NKRIENPSEVLKSGDKVQVKVLDIKPAEERISLSMKALE 388 Query: 351 ANPWQ 355 P + Sbjct: 389 EKPER 393 Score = 271 bits (693), Expect = 5e-71, Method: Composition-based stats. Identities = 100/391 (25%), Positives = 174/391 (44%), Gaps = 25/391 (6%) Query: 183 DQLLENLQEGMEVKGIVKNLT-DYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDE 240 + + ++ G V G + + D A V L G +G++ + + R + ++ + +GD Sbjct: 46 ESAADQIKVGDVVTGELLAIDNDNQAVVGLSTGEEGVVPAREYSDDRNINLADELKIGDT 105 Query: 241 ITVKVLK---FDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE 297 I V+ D+E L K+L + EG + +V N G V++ Sbjct: 106 IEAVVISNVTSDKEGVAYLLSKKRLDARKAWENLS-FAEGDTVDAKVINAVRGGLIVDV- 163 Query: 298 EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQF 357 GV G V S + ++ ++ V++ID R+ L K A Sbjct: 164 NGVRGFVPASMVA-ERFVSDLNQF--KNKDIKAQVIEIDPANARLILSRKAVAAQELAAQ 220 Query: 358 ----AETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGD 413 + G+ VEG + +TDFG F+ L GG+DGLVH+S+IS + + KGD Sbjct: 221 LAEVFSKLSVGEVVEGTVARLTDFGAFVDL-GGVDGLVHVSEISHDRV-KNPADVLTKGD 278 Query: 414 EIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADG 473 ++ +L +D E+ RISL +K P++ G+++ G V V GA VE+ G Sbjct: 279 KVDVKILALDTEKGRISLSIKATQRGPWDEAADQIAAGSVLEGTVKRVKDFGAFVEILPG 338 Query: 474 VEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKD---- 529 +EG + S+ S R+E+ + VL GD+V+ K + ISLS++A +E E++ Sbjct: 339 IEGLVHVSQISNKRIENPSEVLKSGDKVQVKVLDIKPAEERISLSMKALEEKPEREDRRG 398 Query: 530 -----AIATVNKQEDANFSNNAMAEAFKAAK 555 + A + + + S + + F Sbjct: 399 NDGSASRADIAAYKQQDDSAATLGDIFGDKL 429 Score = 62.7 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 30/88 (34%), Gaps = 3/88 (3%) Query: 13 LKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQV---GDEVD 69 + GS++ G V + V+ E + Q N + E +V GD+V Sbjct: 308 EAADQIAAGSVLEGTVKRVKDFGAFVEILPGIEGLVHVSQISNKRIENPSEVLKSGDKVQ 367 Query: 70 VALDAVEDGFGETLLSREKAKRHEAWIT 97 V + ++ LS + + Sbjct: 368 VKVLDIKPAEERISLSMKALEEKPERED 395 >UniRef50_C1ZHL8 Ribosomal protein S1 n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZHL8_PLALI Length = 557 Score = 298 bits (762), Expect = 5e-79, Method: Composition-based stats. Identities = 112/345 (32%), Positives = 185/345 (53%), Gaps = 10/345 (2%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDV 70 + E + PG ++ V ++ + VD G +S +P F + G+E V Sbjct: 173 QITSEDQLAPGMKLKAKVQSVSPENTFVDLGFRSPGMLPTRNFPQGKP---PHPGEEHLV 229 Query: 71 ALDAVEDGFG--ETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIR 128 ++ + G L++ + W L + + V + KGG V + IR Sbjct: 230 IVEKYDAEQGLIYVNLTKSTRRARGNWDEL----QKGQIVEAYVTAVNKGGLEVAVGQIR 285 Query: 129 AFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLEN 188 AFLP S V++ V GK+ +V +++ + N+VVSR+A++ +E + Sbjct: 286 AFLPASQVELGFVSSMDAFVGKKFPVEVTEVNPAKRNLVVSRKAILIAERKEAAASFWDK 345 Query: 189 LQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKF 248 ++ G + G +K + DYGAFVDLGGVDG LH+ +M+W R+KHP++ V + V VL Sbjct: 346 VEVGQKFTGTIKTIKDYGAFVDLGGVDGFLHVGEMSWTRIKHPTDCVREQQTVDVVVLSL 405 Query: 249 DRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSE 308 DRE+ ++ LG++QL ++PW + + Y G +TG+VT +TD+G F+E+E GVEG++H+SE Sbjct: 406 DREKQKIGLGMRQLVQNPWNSAPETYAVGKTVTGKVTRITDFGAFIELEPGVEGMIHISE 465 Query: 309 MDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP 353 + + + V+ G V+ VL+I ER+RISL +K K P Sbjct: 466 L-DYKRVKRVADVLKEGQQVDAQVLEIQPERQRISLSVKALKPKP 509 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 94/346 (27%), Positives = 163/346 (47%), Gaps = 18/346 (5%) Query: 187 ENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKV 245 + L GM++K V++++ FVDLG G+L + + HP G+E V V Sbjct: 178 DQLAPGMKLKAKVQSVSPENTFVDLGFRSPGMLPTRNFPQGKPPHP------GEEHLVIV 231 Query: 246 LKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVH 305 K+D E+ + + L + +G + VT + G V + + + + Sbjct: 232 EKYDAEQGLIYVNLTKSTRRARGNW-DELQKGQIVEAYVTAVNKGGLEVAVGQ-IRAFLP 289 Query: 306 VSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLG----LKQCKANPWQQFAETH 361 S+++ + VG V V +++ +R + + L + F + Sbjct: 290 ASQVELGFVSS--MDAF-VGKKFPVEVTEVNPAKRNLVVSRKAILIAERKEAAASFWDKV 346 Query: 362 NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQ 421 G + G IK+I D+G F+ L GG+DG +H+ ++SW + ++ + VVL Sbjct: 347 EVGQKFTGTIKTIKDYGAFVDL-GGVDGFLHVGEMSWTRI-KHPTDCVREQQTVDVVVLS 404 Query: 422 VDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRAS 481 +D E+++I LG++QL ++P+N+ G VTGKVT + GA +EL GVEG + S Sbjct: 405 LDREKQKIGLGMRQLVQNPWNSAPETYAVGKTVTGKVTRITDFGAFIELEPGVEGMIHIS 464 Query: 482 EASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADE 527 E RV+ VL G +V+A+ + + + ISLSV+A E Sbjct: 465 ELDYKRVKRVADVLKEGQQVDAQVLEIQPERQRISLSVKALKPKPE 510 Score = 167 bits (424), Expect = 7e-40, Method: Composition-based stats. Identities = 68/277 (24%), Positives = 127/277 (45%), Gaps = 14/277 (5%) Query: 14 KEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE-LEIQVGDEVDVAL 72 E + G IV V A++K + V G + + +PA Q + ++ VG + V + Sbjct: 255 NWDELQKGQIVEAYVTAVNKGGLEVAVG-QIRAFLPASQVELGFVSSMDAFVGKKFPVEV 313 Query: 73 DAVEDGFGETLLSRE---KAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRA 129 V ++SR+ A+R EA + E + TG I G V+L G+ Sbjct: 314 TEVNPAKRNLVVSRKAILIAERKEAAASFWDKVEVGQKFTGTIKTIKDYGAFVDLGGVDG 373 Query: 130 FLPGSLVDVRPVRDTLHLE--GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLE 187 FL + ++ + ++ V+ LD+++ + + R ++ + E Sbjct: 374 FLHVGEMSWTRIKHPTDCVREQQTVDVVVLSLDREKQKIGLGMRQLV----QNPWNSAPE 429 Query: 188 NLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVL 246 G V G V +TD+GAF++L GV+G++HI+++ +KRVK ++++ G ++ +VL Sbjct: 430 TYAVGKTVTGKVTRITDFGAFIELEPGVEGMIHISELDYKRVKRVADVLKEGQQVDAQVL 489 Query: 247 KFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGR 283 + ER R+SL +K L P + + G+ Sbjct: 490 EIQPERQRISLSVKALKPKP--EVVAPPKDEDLAPGK 524 Score = 158 bits (399), Expect = 7e-37, Method: Composition-based stats. Identities = 49/283 (17%), Positives = 104/283 (36%), Gaps = 17/283 (6%) Query: 271 AKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEV 330 + G KL +V +++ FV++ G++ + G+ V Sbjct: 177 EDQLAPGMKLKAKVQSVSPENTFVDLGFRSPGMLPTRNFPQGKPP-------HPGEEHLV 229 Query: 331 MVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGL 390 +V D E+ I + L + + + KG VE + ++ G+ + + G I Sbjct: 230 IVEKYDAEQGLIYVNLTKSTRRARGNW-DELQKGQIVEAYVTAVNKGGLEVAV-GQIRAF 287 Query: 391 VHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQ----LAEDPFNNWVA 446 + S + + + G + V +V+ + + + K ++ ++ Sbjct: 288 LPASQVELGFVSS--MDAF-VGKKFPVEVTEVNPAKRNLVVSRKAILIAERKEAAASFWD 344 Query: 447 LNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFT 506 + G TG + + GA V+L GV+G+L E S R++ T + V+ Sbjct: 345 KVEVGQKFTGTIKTIKDYGAFVDLG-GVDGFLHVGEMSWTRIKHPTDCVREQQTVDVVVL 403 Query: 507 GVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAE 549 +DR+ + I L +R + A T + + + Sbjct: 404 SLDREKQKIGLGMRQLVQNPWNSAPETYAVGKTVTGKVTRITD 446 >UniRef50_A3DDC0 Hydroxymethylbutenyl pyrophosphate reductase n=7 Tax=Clostridiales RepID=A3DDC0_CLOTH Length = 694 Score = 298 bits (762), Expect = 5e-79, Method: Composition-based stats. Identities = 128/351 (36%), Positives = 212/351 (60%), Gaps = 6/351 (1%) Query: 4 SFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA---QGEL 60 FA FE S + G V+G ++ + + V VD G K++ IP E++ + E Sbjct: 295 DFANAFENSF--VRIHAGDTVKGKIIGFNSNEVFVDLGYKADGIIPLEEYTDDPNFNIEK 352 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 E+++G+EV+V ++ V DG G LS+ K ++W + KAYE+ V + VKGG Sbjct: 353 EVKIGEEVEVLVEMVNDGEGNVRLSKRKVDAIKSWDDIVKAYENKTPVNAYVVEVVKGGV 412 Query: 121 TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 G+R F+P S V R V+D + + ++++L++KR VV S R +IE E A Sbjct: 413 IASYKGVRIFVPASQVSDRYVKDLNEFLKRSITVRILELNEKRRKVVGSARVIIEEEKEA 472 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 ++ +++ G KG VK+LTD+GAFVD+GGVDGL+HI++++W RVKHPSE++ VGDE Sbjct: 473 LANRTWNSMEVGKVFKGTVKSLTDFGAFVDIGGVDGLIHISELSWTRVKHPSEVLKVGDE 532 Query: 241 ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV 300 + V VL+FD+E+ +VSLG +++ ++PW I ++Y G + V +G FVE+E+GV Sbjct: 533 VEVTVLEFDKEKKKVSLGYRKMEDNPWYKIEEKYKVGDVVKVTVLRFAPFGAFVELEKGV 592 Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKA 351 +GLVH+S++ + + + +G V+ ++++D E ++ISL +K+ Sbjct: 593 DGLVHISQIS-SKRLAKVEDALEIGMKVDAKIIEVDGENKKISLSIKEVMP 642 Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 103/410 (25%), Positives = 186/410 (45%), Gaps = 17/410 (4%) Query: 150 KELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFV 209 +E+ K+ +L+++ ++ I+ N+ + + G VKG + FV Sbjct: 270 EEVIKKMSELNKQGMVDILENDGEIDFANAF--ENSFVRIHAGDTVKGKIIGFNSNEVFV 327 Query: 210 DLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLG-EDPW 267 DLG DG++ + + + + V +G+E+ V V + V L +++ W Sbjct: 328 DLGYKADGIIPLEEYTDDPNFNIEKEVKIGEEVEVLVEMVNDGEGNVRLSKRKVDAIKSW 387 Query: 268 VAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDV 327 I K Y T + V + G +GV V S++ ++ + Sbjct: 388 DDIVKAYENKTPVNAYVVEVVKGGVIAS-YKGVRIFVPASQVSD-RYVKDLNEFLKR--S 443 Query: 328 VEVMVLDIDEERRRISLGLKQCKANPWQ----QFAETHNKGDRVEGKIKSITDFGIFIGL 383 + V +L+++E+RR++ + + + + G +G +KS+TDFG F+ + Sbjct: 444 ITVRILELNEKRRKVVGSARVIIEEEKEALANRTWNSMEVGKVFKGTVKSLTDFGAFVDI 503 Query: 384 DGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNN 443 GG+DGL+H+S++SW + K GDE+ VL+ D E++++SLG +++ ++P+ Sbjct: 504 -GGVDGLIHISELSWTRV-KHPSEVLKVGDEVEVTVLEFDKEKKKVSLGYRKMEDNPWYK 561 Query: 444 WVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEA 503 K G +V V GA VEL GV+G + S+ S R+ L +G +V+A Sbjct: 562 IEEKYKVGDVVKVTVLRFAPFGAFVELEKGVDGLVHISQISSKRLAKVEDALEIGMKVDA 621 Query: 504 KFTGVDRKNRAISLSVRAKDEAD---EKDAIATVNKQEDANFSNNAMAEA 550 K VD +N+ ISLS++ D K + E S N EA Sbjct: 622 KIIEVDGENKKISLSIKEVMPIDPPSSKSESKAKDGSEAKETSANTEEEA 671 >UniRef50_D1VSI0 4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VSI0_9FIRM Length = 725 Score = 296 bits (757), Expect = 2e-78, Method: Composition-based stats. Identities = 130/356 (36%), Positives = 216/356 (60%), Gaps = 7/356 (1%) Query: 2 TESFAQ--LFEESLKEIE-TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK---N 55 E+F + + E + + G IV G V+ + + V+V+ G +S+ I E+ + Sbjct: 269 MENFDKGEMMEAIDNSFKRIKKGEIVTGEVLYVTDNEVMVNLGYRSDGIISKEELSKNTD 328 Query: 56 AQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGK 115 A+ + GDE++V + ++DG G +LS + + + W +E++Y + E VT + + Sbjct: 329 AKPSDLYKQGDEIEVFVLKMDDGDGNVVLSARRVEDMKVWDEIEESYNNHEIVTAKVINQ 388 Query: 116 VKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIE 175 VKGG T L+GI AF+P S V V+ RD G + + ++I D+++ +V+SR+ V+ Sbjct: 389 VKGGLTASLDGISAFIPASHVTVKFQRDLSKFVGDDFQCEIIDFDKRKRRIVLSRKNVLM 448 Query: 176 SENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIV 235 E +R Q+ E+L G ++G V+ LT++GAFVD+GG+DGL+HI++++W RVKHPSE+V Sbjct: 449 RELEEKRSQIFESLHIGDVIEGTVQRLTNFGAFVDIGGIDGLVHISELSWNRVKHPSEVV 508 Query: 236 NVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVE 295 + GD++ V+VL D E+ R++LGLKQ E PW G + G+V N+ D+G FV Sbjct: 509 SAGDKVKVQVLSLDEEKDRIALGLKQTTEKPWDKFINAVKVGDVVKGKVVNILDFGAFVR 568 Query: 296 IEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKA 351 +EEGV+GL+HVS++ + P + +G VEV V++ID+E ++ISL +K Sbjct: 569 LEEGVDGLLHVSQICREH-IEKPQDRLEIGQEVEVKVIEIDQENKKISLSIKALLE 623 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 116/370 (31%), Positives = 186/370 (50%), Gaps = 12/370 (3%) Query: 177 ENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIV 235 E D + +++G V G V +TD V+LG DG++ +++ PS++ Sbjct: 276 EMMEAIDNSFKRIKKGEIVTGEVLYVTDNEVMVNLGYRSDGIISKEELSKNTDAKPSDLY 335 Query: 236 NVGDEITVKVLKFDRERTRVSLGLKQLGEDP-WVAIAKRYPEGTKLTGRVTNLTDYGCFV 294 GDEI V VLK D V L +++ + W I + Y +T +V N G Sbjct: 336 KQGDEIEVFVLKMDDGDGNVVLSARRVEDMKVWDEIEESYNNHEIVTAKVINQVKGGLTA 395 Query: 295 EIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCK---- 350 + +G+ + S + SK V GD + ++D D+ +RRI L K Sbjct: 396 SL-DGISAFIPASHVT-VKFQRDLSKFV--GDDFQCEIIDFDKRKRRIVLSRKNVLMREL 451 Query: 351 ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYK 410 Q E+ + GD +EG ++ +T+FG F+ + GGIDGLVH+S++SWN + Sbjct: 452 EEKRSQIFESLHIGDVIEGTVQRLTNFGAFVDI-GGIDGLVHISELSWNRV-KHPSEVVS 509 Query: 411 KGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVEL 470 GD++ VL +D E++RI+LG+KQ E P++ ++ K G +V GKV + GA V L Sbjct: 510 AGDKVKVQVLSLDEEKDRIALGLKQTTEKPWDKFINAVKVGDVVKGKVVNILDFGAFVRL 569 Query: 471 ADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDA 530 +GV+G L S+ R+ +E L +G EVE K +D++N+ ISLS++A E E D Sbjct: 570 EEGVDGLLHVSQICREHIEKPQDRLEIGQEVEVKVIEIDQENKKISLSIKALLEPIEDDE 629 Query: 531 IATVNKQEDA 540 ++ Sbjct: 630 NKEKTEKPKV 639 Score = 168 bits (426), Expect = 5e-40, Method: Composition-based stats. Identities = 65/283 (22%), Positives = 123/283 (43%), Gaps = 11/283 (3%) Query: 272 KRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVM 331 KR +G +TG V +TD V + +G++ E+ N + PS + GD +EV Sbjct: 286 KRIKKGEIVTGEVLYVTDNEVMVNLGYRSDGIISKEELS-KNTDAKPSDLYKQGDEIEVF 344 Query: 332 VLDIDEERRRISLGLKQCKANP-WQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGL 390 VL +D+ + L ++ + W + E++N + V K+ + G+ LD GI Sbjct: 345 VLKMDDGDGNVVLSARRVEDMKVWDEIEESYNNHEIVTAKVINQVKGGLTASLD-GISAF 403 Query: 391 VHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQ----LAEDPFNNWVA 446 + S ++ + + GD+ ++ D + RI L K E+ + Sbjct: 404 IPASHVTVKF-QRDLSKF--VGDDFQCEIIDFDKRKRRIVLSRKNVLMRELEEKRSQIFE 460 Query: 447 LNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFT 506 G ++ G V + GA V++ G++G + SE S +RV+ + V+S GD+V+ + Sbjct: 461 SLHIGDVIEGTVQRLTNFGAFVDIG-GIDGLVHISELSWNRVKHPSEVVSAGDKVKVQVL 519 Query: 507 GVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAE 549 +D + I+L ++ E I V + + + Sbjct: 520 SLDEEKDRIALGLKQTTEKPWDKFINAVKVGDVVKGKVVNILD 562 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 59/267 (22%), Positives = 113/267 (42%), Gaps = 12/267 (4%) Query: 22 SIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQ-VGDEVDVALDAVEDGFG 80 IV V+ K + + IPA + VGD+ + + Sbjct: 379 EIVTAKVINQVKGGLTASLDG-ISAFIPASHVTVKFQRDLSKFVGDDFQCEIIDFDKRKR 437 Query: 81 ETLLSREKAKR---HEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVD 137 +LSR+ E + ++ + + G + G V++ GI + S + Sbjct: 438 RIVLSRKNVLMRELEEKRSQIFESLHIGDVIEGTVQRLTNFGAFVDIGGIDGLVHISELS 497 Query: 138 VRPVRDTLHLE--GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEV 195 V+ + G +++ +V+ LD++++ + + + E + + Sbjct: 498 WNRVKHPSEVVSAGDKVKVQVLSLDEEKDRIALGLKQTTEKPWDKFINAVKVGDVV---- 553 Query: 196 KGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTR 254 KG V N+ D+GAFV L GVDGLLH++ + + ++ P + + +G E+ VKV++ D+E + Sbjct: 554 KGKVVNILDFGAFVRLEEGVDGLLHVSQICREHIEKPQDRLEIGQEVEVKVIEIDQENKK 613 Query: 255 VSLGLKQLGEDPWVAIAKRYPEGTKLT 281 +SL +K L E K E K+ Sbjct: 614 ISLSIKALLEPIEDDENKEKTEKPKVK 640 Score = 63.1 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 26/100 (26%), Positives = 41/100 (41%) Query: 434 KQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATL 493 K + +N KKG IVTG+V V V L +G + E S++ + Sbjct: 274 KGEMMEAIDNSFKRIKKGEIVTGEVLYVTDNEVMVNLGYRSDGIISKEELSKNTDAKPSD 333 Query: 494 VLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIAT 533 + GDE+E +D + + LS R ++ D I Sbjct: 334 LYKQGDEIEVFVLKMDDGDGNVVLSARRVEDMKVWDEIEE 373 >UniRef50_C9LMR5 Hydroxymethylbutenyl pyrophosphate reductase/ribosomal protein S1 n=1 Tax=Dialister invisus DSM 15470 RepID=C9LMR5_9FIRM Length = 658 Score = 295 bits (756), Expect = 3e-78, Method: Composition-based stats. Identities = 107/352 (30%), Positives = 190/352 (53%), Gaps = 4/352 (1%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQG-- 58 + E ++ E+ ++ GS+V G VV + D + G K+E+ +P ++ + Sbjct: 288 IMEDMNEMLEQEEMNLDVHKGSVVEGKVVDLTDDKAWISFGYKTEAVLPLHEYSYPEPAS 347 Query: 59 -ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVK 117 + +QVGD + V + + +S+ K R W ++A++ E V +K Sbjct: 348 LKDVLQVGDSLRVQVVSSVKEDSTIFVSKIKVDRLADWDVAKEAFDKGEPVECEGIEAIK 407 Query: 118 GGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESE 177 G V+L +R F+P S D+R V L G++ + K++++D +N +V+SR+AV+E + Sbjct: 408 VGLLVQLKSLRGFIPLSQGDLRFVHSLQSLVGQKFKAKILEVDPTKNRLVLSRKAVLEEQ 467 Query: 178 NSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNV 237 + E D + + + G +KG VK + YGAFV L G++GLLHI+D++W+++ +++ Sbjct: 468 RTGELDVIEQAYENGEVLKGTVKKIMPYGAFVALNGIEGLLHISDVSWRKISKVEDVLQP 527 Query: 238 GDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE 297 I VK+ FDRE+ R+S K +PW K + + RV + ++G VE+E Sbjct: 528 EQVIDVKIKSFDREKQRISFSHKDCLPNPWETAVKDHEVDDIVGARVVKILEFGVIVELE 587 Query: 298 EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC 349 +G+ GL+H++EM + N P + VGD + V ++ IDE R+RIS L + Sbjct: 588 DGLTGLLHINEMTQDH-NKKPGDICRVGDDLTVRIIGIDEARKRISFSLVEA 638 Score = 236 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 88/456 (19%), Positives = 186/456 (40%), Gaps = 15/456 (3%) Query: 72 LDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKV--KGGFTVELNGIRA 129 + A++ G + + T V VI G+ G VE+ Sbjct: 187 ITAIKRKAGSVSVHKTICNATSDRQTAAGELARNVDVMIVIGGRNSANTGRLVEVCQAEG 246 Query: 130 FLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENL 189 + ++ + + + + E++++ ++ Sbjct: 247 AV-THHIETAAELKKEWFHSQCKVGITAGASTPDWIIEEVFFIMEDMNEMLEQEEMNLDV 305 Query: 190 QEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKF 248 +G V+G V +LTD A++ G + +L + + ++ +++ VGD + V+V+ Sbjct: 306 HKGSVVEGKVVDLTDDKAWISFGYKTEAVLPLHEYSYPEPASLKDVLQVGDSLRVQVVSS 365 Query: 249 DRERTRVSLG-LKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVS 307 +E + + + +K W + + +G + G V+++ + G + +S Sbjct: 366 VKEDSTIFVSKIKVDRLADWDVAKEAFDKGEPVECEGIEAIKVGLLVQLK-SLRGFIPLS 424 Query: 308 EMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN----PWQQFAETHNK 363 + + +H + + VG + +L++D + R+ L K + + Sbjct: 425 Q--GDLRFVHSLQSL-VGQKFKAKILEVDPTKNRLVLSRKAVLEEQRTGELDVIEQAYEN 481 Query: 364 GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVD 423 G+ ++G +K I +G F+ L GI+GL+H+SD+SW + + I + D Sbjct: 482 GEVLKGTVKKIMPYGAFVAL-NGIEGLLHISDVSWRKISK-VEDVLQPEQVIDVKIKSFD 539 Query: 424 AERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEA 483 E++RIS K +P+ V ++ IV +V + G VEL DG+ G L +E Sbjct: 540 REKQRISFSHKDCLPNPWETAVKDHEVDDIVGARVVKILEFGVIVELEDGLTGLLHINEM 599 Query: 484 SRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSV 519 ++D + + VGD++ + G+D + IS S+ Sbjct: 600 TQDHNKKPGDICRVGDDLTVRIIGIDEARKRISFSL 635 Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats. Identities = 60/282 (21%), Positives = 111/282 (39%), Gaps = 11/282 (3%) Query: 273 RYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMV 332 +G+ + G+V +LTD ++ E ++ + E + V+ VGD + V V Sbjct: 304 DVHKGSVVEGKVVDLTDDKAWISFGYKTEAVLPLHEYSYPEP-ASLKDVLQVGDSLRVQV 362 Query: 333 LDIDEERRRISLG-LKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLV 391 + +E I + +K + W E +KG+ VE + G+ + L + G + Sbjct: 363 VSSVKEDSTIFVSKIKVDRLADWDVAKEAFDKGEPVECEGIEAIKVGLLVQL-KSLRGFI 421 Query: 392 HLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPF----NNWVAL 447 LS G + A +L+VD + R+ L K + E+ + Sbjct: 422 PLSQ-GDLRFVHSLQSL--VGQKFKAKILEVDPTKNRLVLSRKAVLEEQRTGELDVIEQA 478 Query: 448 NKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTG 507 + G ++ G V + GA V L +G+EG L S+ S ++ VL ++ K Sbjct: 479 YENGEVLKGTVKKIMPYGAFVAL-NGIEGLLHISDVSWRKISKVEDVLQPEQVIDVKIKS 537 Query: 508 VDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAE 549 DR+ + IS S + + A+ + + E Sbjct: 538 FDREKQRISFSHKDCLPNPWETAVKDHEVDDIVGARVVKILE 579 Score = 53.0 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 3/79 (3%) Query: 15 EIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQF---KNAQGELEIQVGDEVDVA 71 + IV VV I + V+V+ + + N + +VGD++ V Sbjct: 561 VKDHEVDDIVGARVVKILEFGVIVELEDGLTGLLHINEMTQDHNKKPGDICRVGDDLTVR 620 Query: 72 LDAVEDGFGETLLSREKAK 90 + +++ S +A Sbjct: 621 IIGIDEARKRISFSLVEAP 639 >UniRef50_Q49XT0 30S ribosomal protein S1 n=6 Tax=Staphylococcaceae RepID=RS1_STAS1 Length = 393 Score = 292 bits (748), Expect = 2e-77, Method: Composition-based stats. Identities = 125/362 (34%), Positives = 206/362 (56%), Gaps = 15/362 (4%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDA-GLKSESAIPAEQFKNAQGE 59 MTE F + + + G V G V I++ V+V G K IP Q + Sbjct: 1 MTEEFNESM-----INDIKEGDKVTGEVQEIEEKQVIVAVNGAKFNGIIPISQLSTHHID 55 Query: 60 ---LEIQVGDEVDVALDAVE----DGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVI 112 ++VGDE+ + VE + G +LS+ + + +++ L++ ++ +T+ + Sbjct: 56 NPSDAVKVGDEIGAYVTKVEYDEENETGAYILSKRQLETEKSYEFLQEQLDNNQTIEAKV 115 Query: 113 NGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRA 172 VKGG V++ G R F+P SL+ + D EG+ L+ KV +LD N V++SR+A Sbjct: 116 TEVVKGGLVVDV-GQRGFVPASLISTDFIEDFSDFEGQVLKLKVEELDPANNRVILSRKA 174 Query: 173 VIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPS 232 V EN+ ++D+LLE+L EG ++G V LT++GAFVD+GGVDGL+H+++++ + VK P Sbjct: 175 VEALENAEKKDELLESLNEGDVIEGKVARLTNFGAFVDIGGVDGLVHVSELSHEHVKSPE 234 Query: 233 EIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGC 292 ++V++G+ + VK+ D++ R+SL +K P+ +I + EG + G V L ++G Sbjct: 235 DVVSIGETVNVKIKSVDKDSERISLSIKDTLPSPFESIKGEFNEGDVIEGTVVRLANFGA 294 Query: 293 FVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN 352 FVEI+ GV+GLVH+SE+ ++ PS+ + G VV V VL +D E RISL +K N Sbjct: 295 FVEIKPGVQGLVHISEISHSH-IGSPSEALEPGQVVSVKVLGVDVENERISLSIKATLPN 353 Query: 353 PW 354 Sbjct: 354 EN 355 Score = 264 bits (674), Expect = 9e-69, Method: Composition-based stats. Identities = 101/395 (25%), Positives = 181/395 (45%), Gaps = 23/395 (5%) Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG--VDGLLHITDMAWKRVKHPSEIVN 236 + ++ +++EG +V G V+ + + V + G +G++ I+ ++ + +PS+ V Sbjct: 3 EEFNESMINDIKEGDKVTGEVQEIEEKQVIVAVNGAKFNGIIPISQLSTHHIDNPSDAVK 62 Query: 237 VGDEITVKVLKFDR----ERTRVSLGLKQLG-EDPWVAIAKRYPEGTKLTGRVTNLTDYG 291 VGDEI V K + E L +QL E + + ++ + +VT + G Sbjct: 63 VGDEIGAYVTKVEYDEENETGAYILSKRQLETEKSYEFLQEQLDNNQTIEAKVTEVVKGG 122 Query: 292 CFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKA 351 V++ G G V S + T+ S G V+++ V ++D R+ L K +A Sbjct: 123 LVVDV--GQRGFVPASLIS-TDFIEDFSDF--EGQVLKLKVEELDPANNRVILSRKAVEA 177 Query: 352 ----NPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVR 407 + E+ N+GD +EGK+ +T+FG F+ + GG+DGLVH+S++S + Sbjct: 178 LENAEKKDELLESLNEGDVIEGKVARLTNFGAFVDI-GGVDGLVHVSELSHEHV-KSPED 235 Query: 408 EYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGAT 467 G+ + + VD + ERISL +K PF + +G ++ G V + GA Sbjct: 236 VVSIGETVNVKIKSVDKDSERISLSIKDTLPSPFESIKGEFNEGDVIEGTVVRLANFGAF 295 Query: 468 VELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEAD- 526 VE+ GV+G + SE S + + L G V K GVD +N ISLS++A + Sbjct: 296 VEIKPGVQGLVHISEISHSHIGSPSEALEPGQVVSVKVLGVDVENERISLSIKATLPNEN 355 Query: 527 ----EKDAIATVNKQEDANFSNNAMAEAFKAAKGE 557 + + + + N + + F + Sbjct: 356 VIESDSETTQSYLDNGSDDEDNPTLGDVFGDKLKD 390 >UniRef50_C1G573 rRNA biogenesis protein RRP5 n=4 Tax=Onygenales RepID=C1G573_PARBD Length = 1780 Score = 292 bits (748), Expect = 2e-77, Method: Composition-based stats. Identities = 112/599 (18%), Positives = 226/599 (37%), Gaps = 67/599 (11%) Query: 14 KEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ---GELEIQVGDEVDV 70 K + + GS V G V I D + V+ +P + + + + Sbjct: 796 KFEDFQEGSKVTGFVKNIIADGLFVEFLRGLTGFLPKRLMDDDHVAKPDFGYTLSQTISS 855 Query: 71 ALDAVEDGFGETLLSREKAKRHEAW----------------------ITLEKAYEDAETV 108 + ++ED LS ++ + + I Sbjct: 856 FVHSIEDDRQRFTLSMKENQTSKQRVSDNARPASNANQASINPVDGDIKSFDDLTFGRIT 915 Query: 109 TGVINGKVKGGFTVEL-NGIRAFLPGSLV-------DVRPVRDTLHLEGKELEFKVIKLD 160 I + V+L + I+ + S + R + + ++I + Sbjct: 916 KAKIVSVKETQINVQLADNIQGRIDVSEIFDGWDAIKDRKQPLRYFKPKQIIPVRIIGIH 975 Query: 161 QKR--------------NNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYG 206 R +S + E L+ ++ G G V N+ D Sbjct: 976 DARSHKFLPISHRSGKYPVFELSAKPSSLESKDIELLS-LDKVEIGSSWLGFVNNIGDDC 1034 Query: 207 AFVDL-GGVDGLLHITDMAWKR--VKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLG 263 ++++ V G L ITD++ V ++ VG I V V + ++ R+ L K Sbjct: 1035 LWINITPNVRGRLRITDVSDDLSLVGDVTKNFPVGSAIKVHVTGVNVDKNRLDLSAKHGD 1094 Query: 264 EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVN 323 I+ + +G L GRVT ++D V++ + G +++ +M + P+ + Sbjct: 1095 PLNKRTIS-DFSKGEILLGRVTKVSDRQVLVQLSDTTVGAINLIDMADDYTKVIPAN-FH 1152 Query: 324 VGDVVEVMVLDIDEERRRISLGLKQCK--------ANPWQQFAETHNKGDRVEGKIKSIT 375 +V+ V +LD+D ++I L ++ + +P + D V G ++ + Sbjct: 1153 KNEVLRVCILDVDVPNKKILLSVRPSRVLSSSLPIEDPEIKSISQLKVNDIVRGFVRRVA 1212 Query: 376 DFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQ 435 + G+F+ L + V +SD+S + ++ E++ + ++ VDAE ++ + +K+ Sbjct: 1213 NNGLFVTLGHEVTAYVRISDLSDSY-LKDWQSEFQVDQLVHGRIIFVDAEANKLQMSLKE 1271 Query: 436 LAEDPFNN---WVALNKKGAIVTGKVTAVDAKGATVELAD--GVEGYLRASEASRDRVED 490 +P + +G IVTGKV +V+ GA + + + G +E + +VED Sbjct: 1272 SVLEPNYKAPITIRDLNRGQIVTGKVRSVEEFGAFIVIDGTANLSGLCHRTEMAEQKVED 1331 Query: 491 ATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAE 549 A + GD V+AK +D ISL ++A + D N ++ S + + Sbjct: 1332 ARKLFEKGDIVKAKILKIDHDKERISLGLKASYFKESDDKSDGENSEDGNEQSVSESED 1390 Score = 210 bits (536), Expect = 9e-53, Method: Composition-based stats. Identities = 106/606 (17%), Positives = 220/606 (36%), Gaps = 71/606 (11%) Query: 13 LKEIETRPGSIVRGVVVAIDKDVVLVDA-GLKSESAIPAEQFKNAQGELE------IQVG 65 +PG +V V K+V+L+ G + + AE + Q I+VG Sbjct: 699 NAFENIQPGDLVSCTVFEKSKEVILLRLEGSGLVARLNAEHVTDGQSSKHGSALACIRVG 758 Query: 66 DEV-DVALDAVEDGFGETLLS----REKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 ++ D+ + +++ +S ++A++ + +++ VTG + + G Sbjct: 759 QKLHDLVILSMQKVHRLIKVSNKPSLKQARQRGELPAKFEDFQEGSKVTGFVKNIIADGL 818 Query: 121 TVEL-NGIRAFLPGSLVDVRPV--RDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESE 177 VE G+ FLP L+D V D + + + V ++ R +S + S+ Sbjct: 819 FVEFLRGLTGFLPKRLMDDDHVAKPDFGYTLSQTISSFVHSIEDDRQRFTLSMKENQTSK 878 Query: 178 NS-------------------AERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGL 217 + ++L G K + ++ + V L + G Sbjct: 879 QRVSDNARPASNANQASINPVDGDIKSFDDLTFGRITKAKIVSVKETQINVQLADNIQGR 938 Query: 218 LHITDMAWKRV-----KHPSEIVNVGDEITVKVLKFDRERTR--------------VSLG 258 + ++++ K P I V+++ R+ L Sbjct: 939 IDVSEIFDGWDAIKDRKQPLRYFKPKQIIPVRIIGIHDARSHKFLPISHRSGKYPVFELS 998 Query: 259 LKQLGEDPWVA---IAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWT-NK 314 K + + G+ G V N+ D ++ I V G + ++++ + Sbjct: 999 AKPSSLESKDIELLSLDKVEIGSSWLGFVNNIGDDCLWINITPNVRGRLRITDVSDDLSL 1058 Query: 315 NIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSI 374 +K VG ++V V ++ ++ R+ L K ++ +KG+ + G++ + Sbjct: 1059 VGDVTKNFPVGSAIKVHVTGVNVDKNRLDLSAKHGDPL-NKRTISDFSKGEILLGRVTKV 1117 Query: 375 TDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVK 434 +D + + L G ++L D++ + + K + + +L VD ++I L V+ Sbjct: 1118 SDRQVLVQLSDTTVGAINLIDMADDYTKVIPA-NFHKNEVLRVCILDVDVPNKKILLSVR 1176 Query: 435 Q--------LAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRD 486 EDP ++ K IV G V V G V L V Y+R S+ S Sbjct: 1177 PSRVLSSSLPIEDPEIKSISQLKVNDIVRGFVRRVANNGLFVTLGHEVTAYVRISDLSDS 1236 Query: 487 RVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDA---IATVNKQEDANFS 543 ++D V V + VD + + +S++ A I +N+ + Sbjct: 1237 YLKDWQSEFQVDQLVHGRIIFVDAEANKLQMSLKESVLEPNYKAPITIRDLNRGQIVTGK 1296 Query: 544 NNAMAE 549 ++ E Sbjct: 1297 VRSVEE 1302 Score = 178 bits (451), Expect = 6e-43, Method: Composition-based stats. Identities = 97/593 (16%), Positives = 193/593 (32%), Gaps = 87/593 (14%) Query: 14 KEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALD 73 + + PG+ G +++I +V Sbjct: 647 EYSDILPGNQSPGTIISIHPHGAIVQFYG------------------------------- 675 Query: 74 AVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNG--IRAFL 131 V + + ++ + E + + + + V+ + K K + L G + A L Sbjct: 676 EVREVRKLVVSCKDPSTSTETYKNAFENIQPGDLVSCTVFEKSKEVILLRLEGSGLVARL 735 Query: 132 PGSLVDVRPVRDTLH-----LEGKEL-EFKVIKLDQKRNNVVVSRRAVIESENSA-ERDQ 184 V G++L + ++ + + + VS + ++ E Sbjct: 736 NAEHVTDGQSSKHGSALACIRVGQKLHDLVILSMQKVHRLIKVSNKPSLKQARQRGELPA 795 Query: 185 LLENLQEGMEVKGIVKNLTDYGAFVD-LGGVDGLLHITDMAWKRVKHPSEIVNVGDEITV 243 E+ QEG +V G VKN+ G FV+ L G+ G L M V P + I+ Sbjct: 796 KFEDFQEGSKVTGFVKNIIADGLFVEFLRGLTGFLPKRLMDDDHVAKPDFGYTLSQTISS 855 Query: 244 KVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPE-----------------------GTKL 280 V + +R R +L +K+ P G Sbjct: 856 FVHSIEDDRQRFTLSMKENQTSKQRVSDNARPASNANQASINPVDGDIKSFDDLTFGRIT 915 Query: 281 TGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIH----PSKVVNVGDVVEVMVLDID 336 ++ ++ + V++ + ++G + VSE+ I P + ++ V ++ I Sbjct: 916 KAKIVSVKETQINVQLADNIQGRIDVSEIFDGWDAIKDRKQPLRYFKPKQIIPVRIIGIH 975 Query: 337 EERRR--------------ISLGLKQCKANPWQQFAETH---NKGDRVEGKIKSITDFGI 379 + R L K + G G + +I D + Sbjct: 976 DARSHKFLPISHRSGKYPVFELSAKPSSLESKDIELLSLDKVEIGSSWLGFVNNIGDDCL 1035 Query: 380 FIGLDGGIDGLVHLSDISWN-VAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAE 438 +I + + G + ++D+S + + + + G I V V+ ++ R+ L K Sbjct: 1036 WINITPNVRGRLRITDVSDDLSLVGDVTKNFPVGSAIKVHVTGVNVDKNRLDLSAKHGDP 1095 Query: 439 DPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVG 498 + KG I+ G+VT V + V+L+D G + + + D + Sbjct: 1096 LNKRTI-SDFSKGEILLGRVTKVSDRQVLVQLSDTTVGAINLIDMADDYTKVIPANFHKN 1154 Query: 499 DEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAF 551 + + VD N+ I LSVR I + + N + F Sbjct: 1155 EVLRVCILDVDVPNKKILLSVRPSRVLSSSLPIEDPEIKSISQLKVNDIVRGF 1207 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 74/386 (19%), Positives = 140/386 (36%), Gaps = 21/386 (5%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA-----QGELEIQVG 65 E L + GS G V I D + ++ + + VG Sbjct: 1010 ELLSLDKVEIGSSWLGFVNNIGDDCLWINITPNVRGRLRITDVSDDLSLVGDVTKNFPVG 1069 Query: 66 DEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN 125 + V + V LS + + + E + G + V+L+ Sbjct: 1070 SAIKVHVTGVNVDKNRLDLSAKHGDPLNKRTISD--FSKGEILLGRVTKVSDRQVLVQLS 1127 Query: 126 GIR-AFLPGSLVDVR--PVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAV----IESEN 178 + + V + + L ++ +D +++S R Sbjct: 1128 DTTVGAINLIDMADDYTKVIPANFHKNEVLRVCILDVDVPNKKILLSVRPSRVLSSSLPI 1187 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNV 237 + + L+ V+G V+ + + G FV LG V + I+D++ +K V Sbjct: 1188 EDPEIKSISQLKVNDIVRGFVRRVANNGLFVTLGHEVTAYVRISDLSDSYLKDWQSEFQV 1247 Query: 238 GDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIA---KRYPEGTKLTGRVTNLTDYGCFV 294 + +++ D E ++ + LK+ +P + G +TG+V ++ ++G F+ Sbjct: 1248 DQLVHGRIIFVDAEANKLQMSLKESVLEPNYKAPITIRDLNRGQIVTGKVRSVEEFGAFI 1307 Query: 295 EIEE--GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN 352 I+ + GL H +EM K K+ GD+V+ +L ID ++ RISLGLK Sbjct: 1308 VIDGTANLSGLCHRTEMA-EQKVEDARKLFEKGDIVKAKILKIDHDKERISLGLKASYFK 1366 Query: 353 PWQQFAETHNKGDRVEGKIKSITDFG 378 ++ N D E + D G Sbjct: 1367 ESDDKSDGENSEDGNEQSVSESEDGG 1392 Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats. Identities = 83/574 (14%), Positives = 186/574 (32%), Gaps = 75/574 (13%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIP-----------AEQFKNAQGE 59 E L GS V G V +I+ + + +P E+ N+ + Sbjct: 149 EGLNFKRIVIGSKVLGQVSSINAHDIGLSLPNNLTGYVPLTSISRTFQQKIEKLLNSNED 208 Query: 60 LE-------------------IQVGDEVDVALDAVEDG------FGETLLSREKAKRHEA 94 ++G + ++ A E G+ + R Sbjct: 209 ENEGSDDGDSDDEEDLDLKSYFELGQYLRASVTATESETKNPQTKGKKHIQLSVDPRDAN 268 Query: 95 WITLEKAYEDAETVTGVINGKVKGGFTVEL----NGIRAFLPGSLVDVRPVRDTLHLEGK 150 + TV + G ++L + F+ + + + EG Sbjct: 269 SGLSKSDMVVNTTVQASVVSVEDHGLVMDLGLDDGQTKGFMSSKEIPPD-LEVSQIKEGS 327 Query: 151 ELEFKVIKLDQKRNNVVVSRRA----VIESENSAERDQLLENLQEGMEVKGIVKNLTDYG 206 V + + V +S I+ + + + G + ++ +T G Sbjct: 328 VFLCVVTGHNANGSVVKLSANLPAAGSIKKSHYLTSAPTINSFLPGTAAEILLNEVTSTG 387 Query: 207 AFVDLGG-VDGLLHITD-MAWKRVKHPSEIVNVGDEITVKVLKFDR--ERTRVSLGLKQL 262 + G +D ++ + + ++ + +VG +I +++ E +++ + + Sbjct: 388 MAGKIMGMLDAVVDLVQSGSTTGTENLTTKYHVGAKIKGRLICTFPTVEPSKLGFSILEH 447 Query: 263 GEDPWVAIAKRYPEGT--------KLTGRVTNLTDY-GCFVEIEEGVEGLVHVSEMDWT- 312 + ++Y +VT + G +V+ G VH+S + Sbjct: 448 VVKFSPTVLEQYSTSEDIPAVSAIVPEAKVTKVEPGLGVYVQFNNKHYGFVHISRLSDDK 507 Query: 313 -NKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKI 371 + V E ++ L ++ + E G V+GKI Sbjct: 508 VDSISATQGPYKVDSTHEARIVGFSALDNLYLLSFERKVIDQPFLRLEDVTVGAVVKGKI 567 Query: 372 KSITDF-----GIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAER 426 + + G+ + L GI GLV +S + R++++G +++A +L V+ E+ Sbjct: 568 EKLLTGPDGIDGLIVSLADGISGLVPRMHLSDTK-LQHPERKFREGTQVSARILSVNLEK 626 Query: 427 ERISLGVKQ---LAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVE------GY 477 ++ L +K+ +E P + G G + ++ GA V+ V Sbjct: 627 RQLRLTLKKSLLNSESPAWKEYSDILPGNQSPGTIISIHPHGAIVQFYGEVREVRKLVVS 686 Query: 478 LRASEASRDRVEDATLVLSVGDEVEAKFTGVDRK 511 + S + ++A + GD V ++ Sbjct: 687 CKDPSTSTETYKNAFENIQPGDLVSCTVFEKSKE 720 Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats. Identities = 67/433 (15%), Positives = 144/433 (33%), Gaps = 36/433 (8%) Query: 148 EGKELEFKVIKLDQKRNNVVVSRRAVIE---SENSAERDQLLENLQEGMEVKGIVKNLTD 204 G+ L V + + N + I+ A ++ V+ V ++ D Sbjct: 232 LGQYLRASVTATESETKNPQTKGKKHIQLSVDPRDANSGLSKSDMVVNTTVQASVVSVED 291 Query: 205 YGAFVDLG----GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLG-- 258 +G +DLG G + ++ + G V + + V L Sbjct: 292 HGLVMDLGLDDGQTKGFMSSKEIPPDLEVS---QIKEGSVFLCVVTGHNANGSVVKLSAN 348 Query: 259 ------LKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWT 312 +K+ + GT + +T G +I ++ +V + + T Sbjct: 349 LPAAGSIKKSHYLTSAPTINSFLPGTAAEILLNEVTSTGMAGKIMGMLDAVVDLVQSGST 408 Query: 313 NKNIHPSKVVNVGDVVEVMVLDIDE--ERRRISLGLKQCKANPWQQFAETHNKGD----- 365 + + +VG ++ ++ E ++ + + E ++ + Sbjct: 409 TGTENLTTKYHVGAKIKGRLICTFPTVEPSKLGFSILEHVVKFSPTVLEQYSTSEDIPAV 468 Query: 366 ---RVEGKIKSITDF-GIFIGLDGGIDGLVHLSDISWNVAGEEAVRE--YKKGDEIAAVV 419 E K+ + G+++ + G VH+S +S + + + YK A + Sbjct: 469 SAIVPEAKVTKVEPGLGVYVQFNNKHYGFVHISRLSDDKVDSISATQGPYKVDSTHEARI 528 Query: 420 LQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDA-----KGATVELADGV 474 + A L ++ D + GA+V GK+ + G V LADG+ Sbjct: 529 VGFSALDNLYLLSFERKVIDQPFLRLEDVTVGAVVKGKIEKLLTGPDGIDGLIVSLADGI 588 Query: 475 EGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATV 534 G + S +++ G +V A+ V+ + R + L+++ E A Sbjct: 589 SGLVPRMHLSDTKLQHPERKFREGTQVSARILSVNLEKRQLRLTLKKSLLNSESPAWKEY 648 Query: 535 NKQEDANFSNNAM 547 + N S + Sbjct: 649 SDILPGNQSPGTI 661 >UniRef50_A3ZTD7 30S ribosomal protein S1 n=2 Tax=Bacteria RepID=A3ZTD7_9PLAN Length = 536 Score = 292 bits (747), Expect = 3e-77, Method: Composition-based stats. Identities = 107/344 (31%), Positives = 176/344 (51%), Gaps = 11/344 (3%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDV 70 + + S + V + ++ V +D +++ + F ++G +++V Sbjct: 156 QGISGKTLEVDSRLNATVARVHREEVFIDLPGQNQGFVSLRSF-----VAPPEIGAKLEV 210 Query: 71 ALDAVEDGFG-ETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRA 129 + + G L + W L + V V++G KGG + R Sbjct: 211 VIIKYDREQGLYEALVPGSSVSVVDWGDLTE----GILVDAVVDGVNKGGLECAVGQARG 266 Query: 130 FLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENL 189 F+P S + V + G++L+ V + + +R N+V+S RAV E R + + L Sbjct: 267 FIPASQIAPHHVTNMEDYLGQKLQCLVTEANPERRNLVLSARAVAEKAKEDSRKETMVTL 326 Query: 190 QEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFD 249 Q G G V L D+GAFVD+GGVDGL+H++ ++W RVKHPS+ ++ G + VKV K D Sbjct: 327 QVGQMRDGTVTRLQDFGAFVDIGGVDGLVHVSQISWDRVKHPSDALSEGQAVRVKVTKID 386 Query: 250 RERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEM 309 E ++ L ++ E+PW +A+ + G + G+VT + D+G FVEI G+EGLVHVSE+ Sbjct: 387 PETGKIGLSIRDTLENPWQKVAEEFSVGAIINGKVTKIMDFGAFVEIAPGIEGLVHVSEV 446 Query: 310 DWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP 353 T + V+ G+ VEV V++ID+E+RRI L +K P Sbjct: 447 SHT-RVSRIESVLKAGEKVEVKVVNIDKEKRRIGLSIKALSPAP 489 Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 92/375 (24%), Positives = 165/375 (44%), Gaps = 30/375 (8%) Query: 187 ENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSEIVNVGDEITVKV 245 + L+ + V + F+DL G G + + V P +G ++ V + Sbjct: 161 KTLEVDSRLNATVARVHREEVFIDLPGQNQGFVSL----RSFVAPPE----IGAKLEVVI 212 Query: 246 LKFDRERTRVSLGLKQLGEDPWVAIAK--RYPEGTKLTGRVTNLTDYGCFVEIEEGVEGL 303 +K+DRE+ + L V++ EG + V + G + + G Sbjct: 213 IKYDREQGLY----EALVPGSSVSVVDWGDLTEGILVDAVVDGVNKGGLECAVGQ-ARGF 267 Query: 304 VHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLK----QCKANPWQQFAE 359 + S++ + + + G ++ +V + + ERR + L + + K + ++ Sbjct: 268 IPASQIA-PHHVTNMEDYL--GQKLQCLVTEANPERRNLVLSARAVAEKAKEDSRKETMV 324 Query: 360 THNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVV 419 T G +G + + DFG F+ + GG+DGLVH+S ISW+ + +G + V Sbjct: 325 TLQVGQMRDGTVTRLQDFGAFVDI-GGVDGLVHVSQISWDRV-KHPSDALSEGQAVRVKV 382 Query: 420 LQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLR 479 ++D E +I L ++ E+P+ GAI+ GKVT + GA VE+A G+EG + Sbjct: 383 TKIDPETGKIGLSIRDTLENPWQKVAEEFSVGAIINGKVTKIMDFGAFVEIAPGIEGLVH 442 Query: 480 ASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQED 539 SE S RV VL G++VE K +D++ R I LS++A A A+ + + Sbjct: 443 VSEVSHTRVSRIESVLKAGEKVEVKVVNIDKEKRRIGLSIKALSPAP-----ASKSGGKK 497 Query: 540 ANFSNNAMAEAFKAA 554 + + A K Sbjct: 498 KDEEPEDLDRALKVK 512 >UniRef50_D1BMA5 Hydroxymethylbutenyl pyrophosphate reductase n=3 Tax=Veillonella RepID=D1BMA5_VEIPT Length = 632 Score = 291 bits (746), Expect = 4e-77, Method: Composition-based stats. Identities = 110/355 (30%), Positives = 194/355 (54%), Gaps = 5/355 (1%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE-- 59 + FA+L + + E + G++V G VV ++ + V G K+E+ + + E Sbjct: 273 MKDFAELL-AAEGQEEFKKGNVVEGTVVQVEDERAYVSFGYKTEAILNRTEISYPAPESA 331 Query: 60 -LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 ++ GDE+ + LS + + E W + +A E E + + Sbjct: 332 KDVLKNGDEIKAVIMNHIKEDNPIYLSMTRLAKDEDWQYVIEAQEKDEAIVCKGIDAIPA 391 Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 G V + +R F+P S DV V+ +L G E E KV+++D+K+N +V+SRRAV+E E Sbjct: 392 GLVVTVKSLRGFIPLSQGDVHFVKSLDNLVGTEFEAKVLEIDEKKNRLVLSRRAVLEVER 451 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVG 238 A+ + L+N+ G KGIV+ + YGAFVD+GG++GLLHI+D++W+++K ++++VG Sbjct: 452 QAKLAEALKNINVGENYKGIVRKIMPYGAFVDIGGIEGLLHISDISWQKIKKVEDVLSVG 511 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE 298 EI VK+ FD E ++SL LK L + PW + G + G+V L YG FV + + Sbjct: 512 QEIEVKLQSFDAESNKLSLSLKALSKSPWDVAEETLHVGDVINGKVVRLVAYGAFVAVND 571 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP 353 ++GL+H+S++ +N +N G VEV ++ ++++ +++ L L + + Sbjct: 572 DIQGLLHISQIT-KQRNAKVEDYLNRGQEVEVKIISLNKDEKKLGLALTELMESK 625 Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats. Identities = 84/368 (22%), Positives = 169/368 (45%), Gaps = 12/368 (3%) Query: 172 AVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKH 230 ++ + E ++G V+G V + D A+V G + +L+ T++++ + Sbjct: 271 ETMKDFAELLAAEGQEEFKKGNVVEGTVVQVEDERAYVSFGYKTEAILNRTEISYPAPES 330 Query: 231 PSEIVNVGDEITVKVLKFDRERTRVSLGL-KQLGEDPWVAIAKRYPEGTKLTGRVTNLTD 289 +++ GDEI ++ +E + L + + ++ W + + + + + + Sbjct: 331 AKDVLKNGDEIKAVIMNHIKEDNPIYLSMTRLAKDEDWQYVIEAQEKDEAIVCKGIDAIP 390 Query: 290 YGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC 349 G V ++ + G + +S+ + +V G E VL+IDE++ R+ L + Sbjct: 391 AGLVVTVK-SLRGFIPLSQ-GDVHFVKSLDNLV--GTEFEAKVLEIDEKKNRLVLSRRAV 446 Query: 350 KANPWQQFA----ETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEA 405 Q + N G+ +G ++ I +G F+ + GGI+GL+H+SDISW ++ Sbjct: 447 LEVERQAKLAEALKNINVGENYKGIVRKIMPYGAFVDI-GGIEGLLHISDISWQKI-KKV 504 Query: 406 VREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKG 465 G EI + DAE ++SL +K L++ P++ G ++ GKV + A G Sbjct: 505 EDVLSVGQEIEVKLQSFDAESNKLSLSLKALSKSPWDVAEETLHVGDVINGKVVRLVAYG 564 Query: 466 ATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEA 525 A V + D ++G L S+ ++ R L+ G EVE K +++ + + L++ E+ Sbjct: 565 AFVAVNDDIQGLLHISQITKQRNAKVEDYLNRGQEVEVKIISLNKDEKKLGLALTELMES 624 Query: 526 DEKDAIAT 533 E A Sbjct: 625 KETAEDAE 632 Score = 165 bits (417), Expect = 5e-39, Method: Composition-based stats. Identities = 59/296 (19%), Positives = 120/296 (40%), Gaps = 11/296 (3%) Query: 258 GLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIH 317 +K E + + +G + G V + D +V E +++ +E+ + Sbjct: 272 TMKDFAELLAAEGQEEFKKGNVVEGTVVQVEDERAYVSFGYKTEAILNRTEISYPAP-ES 330 Query: 318 PSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDR-VEGKIKSITD 376 V+ GD ++ ++++ +E I L + + + Q+ + D + K Sbjct: 331 AKDVLKNGDEIKAVIMNHIKEDNPIYLSMTRLAKDEDWQYVIEAQEKDEAIVCKGIDAIP 390 Query: 377 FGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQL 436 G+ + + + G + LS + G E A VL++D ++ R+ L + + Sbjct: 391 AGLVVTV-KSLRGFIPLSQGDVHFVKSLDN---LVGTEFEAKVLEIDEKKNRLVLSRRAV 446 Query: 437 AEDPFNNWV----ALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDAT 492 E + G G V + GA V++ G+EG L S+ S +++ Sbjct: 447 LEVERQAKLAEALKNINVGENYKGIVRKIMPYGAFVDIG-GIEGLLHISDISWQKIKKVE 505 Query: 493 LVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMA 548 VLSVG E+E K D ++ +SLS++A ++ A T++ + N + Sbjct: 506 DVLSVGQEIEVKLQSFDAESNKLSLSLKALSKSPWDVAEETLHVGDVINGKVVRLV 561 Score = 92.3 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 69/178 (38%), Gaps = 8/178 (4%) Query: 13 LKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQGELEIQVGDEVD 69 G +G+V I VD G E + + E + VG E++ Sbjct: 457 EALKNINVGENYKGIVRKIMPYGAFVDIGG-IEGLLHISDISWQKIKKVEDVLSVGQEIE 515 Query: 70 VALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNG-IR 128 V L + + + LS + + W E+ + + G + V G V +N I+ Sbjct: 516 VKLQSFDAESNKLSLSLKALSKSP-WDVAEETLHVGDVINGKVVRLVAYGAFVAVNDDIQ 574 Query: 129 AFLPGSLVDVRPVRDTLHLE--GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQ 184 L S + + G+E+E K+I L++ + ++ ++ES+ +AE + Sbjct: 575 GLLHISQITKQRNAKVEDYLNRGQEVEVKIISLNKDEKKLGLALTELMESKETAEDAE 632 >UniRef50_D1AVV2 RNA binding S1 domain protein n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AVV2_STRM9 Length = 514 Score = 291 bits (744), Expect = 7e-77, Method: Composition-based stats. Identities = 131/520 (25%), Positives = 249/520 (47%), Gaps = 32/520 (6%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL 60 M +F ++ EE L E G + G ++ D + ++ K E I + Sbjct: 1 MNNNFMEMLEEYLPTKEQNLGDKIEGTIIRKDNEFGYLNIQNKLEGRIRVSEI------E 54 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 ++GD+V V + D ++S+ ++ EA+ + + + ++G+I K+KGG+ Sbjct: 55 GFEIGDKVKVLVVKENDE--FLIVSKNILEKKEAFSNI----KKGDKISGIIKEKIKGGY 108 Query: 121 TVELNGIRAFLPG--SLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 VE I+AFLP S ++ + + + G+ LEF V + ++K + Sbjct: 109 KVECGLIKAFLPFRSSGLNQQYIPN-----GELLEFDVTEKNRKEIVI------SRLEII 157 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVG 238 L L G ++ G + N DYG +DLG + GLLH ++++W + K + VG Sbjct: 158 KENEKNFLNKLNLGDKITGTISNKLDYGMIIDLGTLSGLLHSSEISWNKEKTLKD-FTVG 216 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE 298 ++I VK+++ D+E ++ L +KQL E+PW+ I ++Y G + V + +G V++ + Sbjct: 217 EKIDVKIIELDKETKKIKLSIKQLVENPWLKIREKYHIGQNIDAPVKEVFSFGVVVDLGD 276 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFA 358 E L+HVS++ + K + K GDV+ V+DI++E+ +I L + W+ Sbjct: 277 -REDLIHVSDL-YYKKIGNVEKEYKKGDVIFCEVIDINDEKEKIILSARTVFEKIWESLD 334 Query: 359 ETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAV 418 + D + K+ + DFG F D ++ V S+ SWN A + K GD + Sbjct: 335 DFCLLNDIINIKVTRVKDFGFFAKTDENLEIFVPKSEYSWNKADDL---NIKVGDSLDVK 391 Query: 419 VLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYL 478 ++++ E + + +K+L + P++ + K ++T + G V L D +G + Sbjct: 392 LIEIKKEDKNLVGSIKRLGKSPYDIASSKFDKNTEYEVEITDILENGVLVRLTDDFKGLI 451 Query: 479 RASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLS 518 E S++ ++D +VGD+++A + +I LS Sbjct: 452 PKKELSKEEIKDIKEHFNVGDKIKAVVFDKN-NKNSILLS 490 Score = 189 bits (479), Expect = 3e-46, Method: Composition-based stats. Identities = 97/452 (21%), Positives = 205/452 (45%), Gaps = 31/452 (6%) Query: 99 EKAYEDAETVTGVINGK-VKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVI 157 K + + G I K + G+ N + + S ++ G +++ V+ Sbjct: 15 TKEQNLGDKIEGTIIRKDNEFGYLNIQNKLEGRIRVSEIEG-------FEIGDKVKVLVV 67 Query: 158 KLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGL 217 K + + V S+N E+ + N+++G ++ GI+K G V+ G + Sbjct: 68 KENDEFLIV---------SKNILEKKEAFSNIKKGDKISGIIKEKIKGGYKVECGLIKAF 118 Query: 218 LHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEG 277 L + + G+ + V + + R + + ++ ++ + G Sbjct: 119 LPFR-----SSGLNQQYIPNGELLEFDVTE--KNRKEIVISRLEIIKENEKNFLNKLNLG 171 Query: 278 TKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDE 337 K+TG ++N DYG +++ + GL+H SE+ W + K VG+ ++V ++++D+ Sbjct: 172 DKITGTISNKLDYGMIIDLGT-LSGLLHSSEISWNKE--KTLKDFTVGEKIDVKIIELDK 228 Query: 338 ERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDIS 397 E ++I L +KQ NPW + E ++ G ++ +K + FG+ + L D L+H+SD+ Sbjct: 229 ETKKIKLSIKQLVENPWLKIREKYHIGQNIDAPVKEVFSFGVVVDLGDRED-LIHVSDLY 287 Query: 398 WNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGK 457 + G +EYKKGD I V+ ++ E+E+I L + + E + + I+ K Sbjct: 288 YKKIG-NVEKEYKKGDVIFCEVIDINDEKEKIILSARTVFEKIWESLDDFCLLNDIINIK 346 Query: 458 VTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISL 517 VT V G + + +E ++ SE S ++ +D + VGD ++ K + ++++ + Sbjct: 347 VTRVKDFGFFAKTDENLEIFVPKSEYSWNKADDLN--IKVGDSLDVKLIEIKKEDKNLVG 404 Query: 518 SVRAKDEADEKDAIATVNKQEDANFSNNAMAE 549 S++ ++ A + +K + + E Sbjct: 405 SIKRLGKSPYDIASSKFDKNTEYEVEITDILE 436 >UniRef50_Q5KH56 RRNA processing-related protein, putative n=2 Tax=Filobasidiella neoformans RepID=Q5KH56_CRYNE Length = 1484 Score = 291 bits (744), Expect = 7e-77, Method: Composition-based stats. Identities = 101/571 (17%), Positives = 218/571 (38%), Gaps = 52/571 (9%) Query: 4 SFAQ--LFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQG 58 SF Q L + ++ E + G ++G + + ++ V+ + + + + Sbjct: 510 SFEQSVLSQLFMQVDELKVGQQLKGTIRRLTDKMLFVNVHGNVDGIVHPTHYADIRLKHP 569 Query: 59 ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLE--KAYEDAETVTGVINGKV 116 + + V + +E +L+ +K + + + E G + V Sbjct: 570 QKRFKPEGSVKARVLYLEPTRNRVVLTLKKTFLESDLAVPQGFEDLKVGEVTLGSVLKIV 629 Query: 117 KGGFTVELN-GIRAFLPGSLVDVRPVRDTLH--LEGKELEFKVIKLDQKRNNVVVSRRAV 173 G VEL G++AF+P S +++ GK L +VI +D + +VVS + Sbjct: 630 DKGVIVELFAGLKAFMPHSECSQTHIKNLSEAFYIGKPLTVRVITVDASASRIVVSAKQA 689 Query: 174 IESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG--VDGLLHITDMAWKR---V 228 + + ++ L+ G V G V + V L G + LL +++++ +R + Sbjct: 690 APTAPATAAEK----LEVGEAVSGTVSQVHTEQVVVKLDGNGLTALLSLSNLSNQRHTGI 745 Query: 229 KHPSEIVNVGDEIT-VKVLKFDRERTRVSLGLKQLG----------------EDPWVAIA 271 + + G++I + V+ + + + +K+ V Sbjct: 746 EELRRSLKEGEKIDDLVVVSKNPVSGLIIVNIKKTITAKKEKAKKEDKAPSGISAHVKAI 805 Query: 272 KRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVM 331 G +TG V T G V++ + G VH + + VG+ V+ Sbjct: 806 DAIEVGQIITGTVQEQTSQGYMVQLPNNLRGRVHPCDSSDDLALAAGHGPLTVGEEVKCY 865 Query: 332 VLDIDEERRRISLGLKQCKA-------NPWQQFAETHNKGDRVEGKIKSITDFGIFIGLD 384 VLD++ +R I L + + + + +G+ V G +K+I G+F+ L Sbjct: 866 VLDVNRSKRAIDLSTRLSRVQGKENVVDREINTVDDLKEGESVRGLVKNIAGHGVFVSLG 925 Query: 385 GGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNW 444 + + + ++ ++ ++ ++ +L ++ I + +++ Sbjct: 926 RNVTARIMIKELFDEYV-KDWKSRFEINQLVSGKILSINPGSNSIEMTLRKNPSKSAKKT 984 Query: 445 V----ALNKKGAIVTGKVTAVDAKGATVELAD-GVEGYLRASEASRDRVEDATLVLS--- 496 + ++G V V V+A G +++ V G SE + +R D L Sbjct: 985 ALLSLSDFEEGQKVVAVVRKVEAYGMFLKIEGSNVSGLCHKSEITDNRKADVAQALKGFR 1044 Query: 497 VGDEVEAKFTGVDRKNRAISLSVRAKDEADE 527 GD+V+AK +D + IS ++A +E Sbjct: 1045 EGDQVKAKIVSIDTEKGKISFGIKASYFGEE 1075 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 98/555 (17%), Positives = 214/555 (38%), Gaps = 43/555 (7%) Query: 27 VVVAIDKD-VVLVDAGLKSESAIPAEQFKNAQGELE------IQVGDEVDVALDAVEDGF 79 V + D V+V E + + + + + G + Sbjct: 445 KVTRVLNDWGVMVRTQDGLEGFVHISHLADERIPVLSNATPQFKAGTLHRARVIGHSPMD 504 Query: 80 GETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNG-IRAFLPGSL--- 135 G LLS E++ + ++ +++ + + + G I V ++G + + + Sbjct: 505 GVLLLSFEQSVLSQLFMQVDE-LKVGQQLKGTIRRLTDKMLFVNVHGNVDGIVHPTHYAD 563 Query: 136 VDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEV 195 + ++ + EG ++ +V+ L+ RN VV++ + + A Q E+L+ G Sbjct: 564 IRLKHPQKRFKPEGS-VKARVLYLEPTRNRVVLTLKKTFLESDLAVP-QGFEDLKVGEVT 621 Query: 196 KGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTR 254 G V + D G V+L G+ + ++ + +K+ SE +G +TV+V+ D +R Sbjct: 622 LGSVLKIVDKGVIVELFAGLKAFMPHSECSQTHIKNLSEAFYIGKPLTVRVITVDASASR 681 Query: 255 VSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI-EEGVEGLVHVSEMDWTN 313 + + KQ A++ G ++G V+ + V++ G+ L+ +S + Sbjct: 682 IVVSAKQAAPTAPATAAEKLEVGEAVSGTVSQVHTEQVVVKLDGNGLTALLSLSNLSNQR 741 Query: 314 K--NIHPSKVVNVGDVV-EVMVLDIDEERRRISLGLKQCKA----------------NPW 354 + + G+ + +++V+ + I + +K+ + Sbjct: 742 HTGIEELRRSLKEGEKIDDLVVVSKNPVSGLIIVNIKKTITAKKEKAKKEDKAPSGISAH 801 Query: 355 QQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDE 414 + + G + G ++ T G + L + G VH D S ++A G+E Sbjct: 802 VKAIDAIEVGQIITGTVQEQTSQGYMVQLPNNLRGRVHPCDSSDDLALAAGHGPLTVGEE 861 Query: 415 IAAVVLQVDAERERISLGV-------KQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGAT 467 + VL V+ + I L K+ D N V K+G V G V + G Sbjct: 862 VKCYVLDVNRSKRAIDLSTRLSRVQGKENVVDREINTVDDLKEGESVRGLVKNIAGHGVF 921 Query: 468 VELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSV-RAKDEAD 526 V L V + E + V+D + V K ++ + +I +++ + ++ Sbjct: 922 VSLGRNVTARIMIKELFDEYVKDWKSRFEINQLVSGKILSINPGSNSIEMTLRKNPSKSA 981 Query: 527 EKDAIATVNKQEDAN 541 +K A+ +++ E+ Sbjct: 982 KKTALLSLSDFEEGQ 996 Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats. Identities = 91/601 (15%), Positives = 195/601 (32%), Gaps = 70/601 (11%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN--------------- 55 E L PG+ V V I +++ + +P + N Sbjct: 114 EILNYKRLVPGTHVLARVHTILPLHLILSLPNNLLAHVPITEISNTLTQLLTAEEAMAVD 173 Query: 56 ------------AQGELEIQVGDEVDVALDAVEDGFGETLLSREKA-------------- 89 G V + + ++ +S+ Sbjct: 174 EGEEESDDESSAPDLAQLFVPGQYVHAKVLTLYPTASQSFISQYPITETTKLASRVELTL 233 Query: 90 -KRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-------GIRAFLPGSLVDVRPV 141 +K E + G + + G+ V + + F+ V + V Sbjct: 234 IPEKVNSEVAKKDLETGYFLVGEVKSEEDKGWIVGVGLNTQGGSSVEGFVSKDEVA-KFV 292 Query: 142 RDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKN 201 + G+ L + + +S + + + ++ G V ++ Sbjct: 293 PAQALIPGQLLPATISSIAAGGRVAHLSLNQQDITRSQISEVSTVGSIVPGHSVNALITA 352 Query: 202 LTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSEIVNVGDEITVKVL--KFDRERTRVSLG 258 + G V + G DG + + + +G +I +V+ +L Sbjct: 353 VVPSGLNVKVAGFFDGTIDLAHLPLG-EDDIENKYKIGKKIRARVIYDNLAANPHSFALS 411 Query: 259 --------LKQLGEDPWVAIAKRYPEGTKLTG-RVTNL-TDYGCFVEIEEGVEGLVHVSE 308 E + P G +VT + D+G V ++G+EG VH+S Sbjct: 412 ALPHVLNFTSPTQEGDNTPLELAIPIGKVYQSVKVTRVLNDWGVMVRTQDGLEGFVHISH 471 Query: 309 MDWTN--KNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDR 366 + + + G + V+ + L +Q + + G + Sbjct: 472 LADERIPVLSNATPQFKAGTLHRARVIGHSPMDGVLLLSFEQSVLSQLFMQVDELKVGQQ 531 Query: 367 VEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAER 426 ++G I+ +TD +F+ + G +DG+VH + + + + + +K + A VL ++ R Sbjct: 532 LKGTIRRLTDKMLFVNVHGNVDGIVHPTHYAD-IRLKHPQKRFKPEGSVKARVLYLEPTR 590 Query: 427 ERISLGVKQL---AEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEA 483 R+ L +K+ ++ K G + G V + KG VEL G++ ++ SE Sbjct: 591 NRVVLTLKKTFLESDLAVPQGFEDLKVGEVTLGSVLKIVDKGVIVELFAGLKAFMPHSEC 650 Query: 484 SRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFS 543 S+ +++ + +G + + VD I +S + A + E + + Sbjct: 651 SQTHIKNLSEAFYIGKPLTVRVITVDASASRIVVSAKQAAPTAPATAAEKLEVGEAVSGT 710 Query: 544 N 544 Sbjct: 711 V 711 Score = 97.7 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 71/456 (15%), Positives = 136/456 (29%), Gaps = 74/456 (16%) Query: 163 RNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHIT 221 + N ++ + +N + L G V V + + L + + IT Sbjct: 95 KKNEDAKKKEERDKDNIRVEILNYKRLVPGTHVLARVHTILPLHLILSLPNNLLAHVPIT 154 Query: 222 DMAWKRVK------------------------HPSEIVNVGDEITVKVL----------- 246 +++ + +++ G + KVL Sbjct: 155 EISNTLTQLLTAEEAMAVDEGEEESDDESSAPDLAQLFVPGQYVHAKVLTLYPTASQSFI 214 Query: 247 ------KFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEG- 299 + + +RV L L + K G L G V + D G V + Sbjct: 215 SQYPITETTKLASRVELTL-IPEKVNSEVAKKDLETGYFLVGEVKSEEDKGWIVGVGLNT 273 Query: 300 -----VEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCK---- 350 VEG V E+ P++ + G ++ + I R L L Q Sbjct: 274 QGGSSVEGFVSKDEVAKFV----PAQALIPGQLLPATISSIAAGGRVAHLSLNQQDITRS 329 Query: 351 ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYK 410 + G V I ++ G+ + + G DG + L+ + ++ +YK Sbjct: 330 QISEVSTVGSIVPGHSVNALITAVVPSGLNVKVAGFFDGTIDLAHLPLG--EDDIENKYK 387 Query: 411 KGDEIAAVVLQVDAERE--RISLGV--------KQLAEDPFNNWVALNKKGAIVT-GKVT 459 G +I A V+ + +L E G + KVT Sbjct: 388 IGKKIRARVIYDNLAANPHSFALSALPHVLNFTSPTQEGDNTPLELAIPIGKVYQSVKVT 447 Query: 460 AVD-AKGATVELADGVEGYLRASEASRDRVEDATLV---LSVGDEVEAKFTGVDRKNRAI 515 V G V DG+EG++ S + +R+ + G A+ G + + Sbjct: 448 RVLNDWGVMVRTQDGLEGFVHISHLADERIPVLSNATPQFKAGTLHRARVIGHSPMDGVL 507 Query: 516 SLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAF 551 LS + + + + + + + Sbjct: 508 LLSFEQSVLSQLFMQVDELKVGQQLKGTIRRLTDKM 543 >UniRef50_A8YV34 30S ribosomal protein S1 n=29 Tax=Lactobacillus RepID=A8YV34_LACH4 Length = 403 Score = 290 bits (743), Expect = 8e-77, Method: Composition-based stats. Identities = 117/370 (31%), Positives = 194/370 (52%), Gaps = 9/370 (2%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDA-GLKSESAIPAEQF---KNA 56 M+E+ Q + + G IV V+ ++ + V E I ++ +NA Sbjct: 1 MSENSNQFLDALKQMQGVEVGDIVDVEVLDVEDGQINVGVVNAGVEGVITRREYTSDRNA 60 Query: 57 QGELEIQVGDEVDVALDAV---EDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVIN 113 ++ GD+ + + GE S + K EA+ L+K +E+ + G + Sbjct: 61 DLRDLVKPGDKFKALVLRRAGGDKENGEFFFSVTRLKEREAYDKLQKDFEEGNAIEGTVT 120 Query: 114 GKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAV 173 V+GG V++ G R FLP SL+ R V D GK ++ K+ ++D +N +++S + + Sbjct: 121 SSVRGGLLVDV-GTRGFLPASLISNRYVSDLKPYIGKTMKLKITEIDPNKNRLILSHKDL 179 Query: 174 IESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSE 233 IE E D++ L G ++G V LT++GAF+D+GGVDGL+HI+++++K V PS+ Sbjct: 180 IEEEREEAFDKVASQLVVGDVIEGKVSRLTNFGAFIDVGGVDGLVHISEISYKHVDKPSD 239 Query: 234 IVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCF 293 ++ G ++ VKV+ D +R R+SL +KQ P+ EG G V +LT++G F Sbjct: 240 VLKAGQDVKVKVIGIDDDRHRISLSIKQTEPSPFEQATADLNEGDVFEGEVKSLTNFGAF 299 Query: 294 VEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP 353 VE+ +G++GLVHVSE+ + PS V+ V V+V VL+ID RRISL +K +N Sbjct: 300 VEVADGIQGLVHVSEISNKH-VDKPSDVLKVDQTVKVKVLNIDPSDRRISLSIKAADSNA 358 Query: 354 WQQFAETHNK 363 + Sbjct: 359 SSSDNHSSRP 368 Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats. Identities = 99/398 (24%), Positives = 180/398 (45%), Gaps = 33/398 (8%) Query: 184 QLLENLQEGMEVKGIVKNLTDYGAFVDL--GGVDGLLHITDMAWKRVKHPSEIVNVGDEI 241 + ++ ++ G V V ++ D V + GV+G++ + R ++V GD+ Sbjct: 13 KQMQGVEVGDIVDVEVLDVEDGQINVGVVNAGVEGVITRREYTSDRNADLRDLVKPGDKF 72 Query: 242 TVKVLKF---DRERTRVSLGLKQLGEDPWVA-IAKRYPEGTKLTGRVTNLTDYGCFVEIE 297 VL+ D+E + +L E + K + EG + G VT+ G V++ Sbjct: 73 KALVLRRAGGDKENGEFFFSVTRLKEREAYDKLQKDFEEGNAIEGTVTSSVRGGLLVDV- 131 Query: 298 EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLG----LKQCKANP 353 G G + S + +G +++ + +ID + R+ L +++ + Sbjct: 132 -GTRGFLPASLIS-NRYVSDLKPY--IGKTMKLKITEIDPNKNRLILSHKDLIEEEREEA 187 Query: 354 WQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGD 413 + + A GD +EGK+ +T+FG FI + GG+DGLVH+S+IS+ ++ K G Sbjct: 188 FDKVASQLVVGDVIEGKVSRLTNFGAFIDV-GGVDGLVHISEISYKHV-DKPSDVLKAGQ 245 Query: 414 EIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADG 473 ++ V+ +D +R RISL +KQ PF A +G + G+V ++ GA VE+ADG Sbjct: 246 DVKVKVIGIDDDRHRISLSIKQTEPSPFEQATADLNEGDVFEGEVKSLTNFGAFVEVADG 305 Query: 474 VEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKD---------- 523 ++G + SE S V+ + VL V V+ K +D +R ISLS++A D Sbjct: 306 IQGLVHVSEISNKHVDKPSDVLKVDQTVKVKVLNIDPSDRRISLSIKAADSNASSSDNHS 365 Query: 524 ------EADEKDAIATVNKQEDANFSNNAMAEAFKAAK 555 + + ++ + + + K K Sbjct: 366 SRPRRSRNENSVNNKYMGDNDNGFALGDIIGDQLKDRK 403 Score = 86.9 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 82/199 (41%), Gaps = 10/199 (5%) Query: 344 LGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDG-GIDGLVHLSDISWNVAG 402 + + + + GD V+ ++ + D I +G+ G++G++ + + + Sbjct: 1 MSENSNQFLDALKQMQGVEVGDIVDVEVLDVEDGQINVGVVNAGVEGVITRREYTSDR-N 59 Query: 403 EEAVREYKKGDEIAAVVLQV---DAERERISLGV-KQLAEDPFNNWVALNKKGAIVTGKV 458 + K GD+ A+VL+ D E V + + ++ ++G + G V Sbjct: 60 ADLRDLVKPGDKFKALVLRRAGGDKENGEFFFSVTRLKEREAYDKLQKDFEEGNAIEGTV 119 Query: 459 TAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLS 518 T+ G V++ G G+L AS S V D +G ++ K T +D + LS Sbjct: 120 TSSVRGGLLVDV--GTRGFLPASLISNRYVSDLKPY--IGKTMKLKITEIDPNKNRLILS 175 Query: 519 VRAKDEADEKDAIATVNKQ 537 + E + ++A V Q Sbjct: 176 HKDLIEEEREEAFDKVASQ 194 Score = 61.5 bits (148), Expect = 8e-08, Method: Composition-based stats. Identities = 14/105 (13%), Positives = 33/105 (31%), Gaps = 3/105 (2%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE---IQVGDEVDVALD 73 + G + G V ++ V+ + + + N + ++V V V + Sbjct: 279 DLNEGDVFEGEVKSLTNFGAFVEVADGIQGLVHVSEISNKHVDKPSDVLKVDQTVKVKVL 338 Query: 74 AVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 ++ LS + A + + + +N K G Sbjct: 339 NIDPSDRRISLSIKAADSNASSSDNHSSRPRRSRNENSVNNKYMG 383 >UniRef50_C6PXA3 RNA binding S1 domain protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PXA3_9CLOT Length = 388 Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats. Identities = 127/357 (35%), Positives = 215/357 (60%), Gaps = 6/357 (1%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE-- 59 + F + E S+K R G +V+G ++++ ++ +V+ G S+ + + + + Sbjct: 11 MKEFMEDIESSMKS--IRRGEVVKGKIISVTENHAIVNIGYMSDGILSKSEVVENEEDNL 68 Query: 60 -LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 ++ +E+ V + + DG G LLS++ A + +AW L+KA+E+ V + VKG Sbjct: 69 SDILKENEEIYVYVLDMNDGEGNVLLSKKAADKIKAWDELKKAFEEKSDVETTVKEVVKG 128 Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 G +NGIRAF+P S + + V D GK L KVI+ D+ + VV+SR+ + ++E Sbjct: 129 GVVTYINGIRAFIPASQLSLSYVEDLKSFIGKTLTVKVIEFDKDKEKVVLSRKVIEKAEA 188 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVG 238 ++ LL +++ G + G+V L +GAFVDLGGVDGL+H+++++WKRV +P+++V+VG Sbjct: 189 EEKKQHLLNSIKPGEKRSGVVSRLAKFGAFVDLGGVDGLIHVSELSWKRVNNPADVVSVG 248 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE 298 D++ V +L D+E +++L LK + E+PW ++ ++ G + G V L +G FVEI+ Sbjct: 249 DKVEVYILSVDKENNKIALALKDVNENPWESVGNKFKIGDVVEGEVLKLASFGAFVEIQP 308 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQ 355 GVEGLVH+SE+ + PS V+N+GD V V +LDID + RISL +K P + Sbjct: 309 GVEGLVHISEISEE-RIAKPSDVLNLGDKVRVKILDIDNKENRISLSIKDAVEKPKE 364 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 100/383 (26%), Positives = 184/383 (48%), Gaps = 13/383 (3%) Query: 176 SENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSEI 234 E + + +++++ G VKG + ++T+ A V++G + DG+L +++ + S+I Sbjct: 12 KEFMEDIESSMKSIRRGEVVKGKIISVTENHAIVNIGYMSDGILSKSEVVENEEDNLSDI 71 Query: 235 VNVGDEITVKVLKFDRERTRVSLGLKQLGE-DPWVAIAKRYPEGTKLTGRVTNLTDYGCF 293 + +EI V VL + V L K + W + K + E + + V + G Sbjct: 72 LKENEEIYVYVLDMNDGEGNVLLSKKAADKIKAWDELKKAFEEKSDVETTVKEVVKGGVV 131 Query: 294 VEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCK--- 350 I G+ + S++ + +G + V V++ D+++ ++ L K + Sbjct: 132 TYI-NGIRAFIPASQLSLSY-VEDLKSF--IGKTLTVKVIEFDKDKEKVVLSRKVIEKAE 187 Query: 351 -ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREY 409 Q + G++ G + + FG F+ L GG+DGL+H+S++SW Sbjct: 188 AEEKKQHLLNSIKPGEKRSGVVSRLAKFGAFVDL-GGVDGLIHVSELSWKRVN-NPADVV 245 Query: 410 KKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVE 469 GD++ +L VD E +I+L +K + E+P+ + K G +V G+V + + GA VE Sbjct: 246 SVGDKVEVYILSVDKENNKIALALKDVNENPWESVGNKFKIGDVVEGEVLKLASFGAFVE 305 Query: 470 LADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKD 529 + GVEG + SE S +R+ + VL++GD+V K +D K ISLS++ E K+ Sbjct: 306 IQPGVEGLVHISEISEERIAKPSDVLNLGDKVRVKILDIDNKENRISLSIKDAVEKP-KE 364 Query: 530 AIATVNKQEDANFSNNAMAEAFK 552 + N E A S + + FK Sbjct: 365 DLDKFNDNESAGTSLADLLKDFK 387 >UniRef50_A6S458 Putative uncharacterized protein n=1 Tax=Botryotinia fuckeliana B05.10 RepID=A6S458_BOTFB Length = 1678 Score = 289 bits (739), Expect = 2e-76, Method: Composition-based stats. Identities = 103/571 (18%), Positives = 205/571 (35%), Gaps = 62/571 (10%) Query: 15 EIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ---GELEIQVGDEVDVA 71 + + V G V I V V G +P + + + ++V Sbjct: 824 FDDVKEKKTVHGFVKNITLTAVFVQFGGGLTGLLPKNKIPEKNLRLPDFGFKKYQTIEVK 883 Query: 72 LDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETV-------------------TGVI 112 + ++ G LLS A + + E V + Sbjct: 884 VLTIDHGQRRFLLSMADATSDKKSNEPLAPGANQEAVNPIDETIKSIEDITLGRLTKARV 943 Query: 113 NGKVKGGFTVEL-NGIRAFLPGSL-------VDVRPVRDTLHLEGKELEFKVIKLD--QK 162 + V+L + I+ + S + + + ++ +V+ + + Sbjct: 944 SSVKDTQVNVQLADNIQGRIDVSQAFDSWSDIKSKKQPLKTFSPKQIVDVRVLGIHDARN 1003 Query: 163 RNNVVVSRR-----------AVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL 211 + +S R + SA+ L+ ++ G V N+ +V++ Sbjct: 1004 HRFLPISHRSGKTLVFELSAKPSDQTESAQDPVSLDKIKVGSSWLAFVNNVGVDCLWVNI 1063 Query: 212 -GGVDGLLHITDMAWK--RVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWV 268 V G + D++ +K + +G I V V D E R+ L + + + Sbjct: 1064 SPNVRGRISALDVSDDVSLLKDLAANFPIGSAIRVHVKGVDVETNRLDLSARSSQDSEAL 1123 Query: 269 AIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVV 328 + +G + G+VT + + V++ + + ++++++ PSK + D+V Sbjct: 1124 TF-DKLSQGMIVPGKVTRVNERQVMVQLTDSISAPINLTDLCDDYSEADPSKY-SKNDIV 1181 Query: 329 EVMVLDIDEERRRISLGLKQCK--------ANPWQQFAETHNKGDRVEGKIKSITDFGIF 380 V V DID +R+ L + + +P D V G +K + D G+F Sbjct: 1182 RVCVTDIDVPNKRVRLSTRASRVMNSSAAVQDPEISSISQLKVNDIVRGFVKHVADKGLF 1241 Query: 381 IGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQ---LA 437 + L G + V +SD+S + ++ E++ + V VD + L +K Sbjct: 1242 VNLGGNVTAYVRISDLSDSYI-KDWKSEFQVDQLVKGKVTVVDEVLNHVQLSLKPSVIDK 1300 Query: 438 EDPFNNWVALNKKGAIVTGKVTAVDAKGATVELAD--GVEGYLRASEASRDRVEDATLVL 495 + + +VTGK+ V+ G + + V G SE + RV D + Sbjct: 1301 DYVAPLTFNDIQVNQVVTGKIRKVEDFGVFIVVDGSANVSGLCHQSEMAEKRVHDVKKLY 1360 Query: 496 SVGDEVEAKFTGVDRKNRAISLSVRAKDEAD 526 S GD V+A +D + + IS S++A D Sbjct: 1361 SEGDAVKAIVLKMDTEKKRISFSMKASHFED 1391 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 111/604 (18%), Positives = 216/604 (35%), Gaps = 65/604 (10%) Query: 9 FEESLKEIETRPGSIVRGVVVAIDKDVVLVDA-GLKSESAIPAEQFKNAQGEL------E 61 + + G IV +V+ D + V+ GL ++ +P + Sbjct: 722 LAQQNALKNLKIGEIVSALVIEKSNDDISVEIQGLGLKAILPVGHLTDGSENKSRSSFKN 781 Query: 62 IQVGDEVD--VALDAVEDGFGETLLSREKAKRHEAWITLEKAY---EDAETVTGVINGKV 116 I+VG + LD +E L ++ + TL + + ++ +TV G + Sbjct: 782 IRVGQVLSDLAVLDKLEPKRLIVLTNKPALVKAAQNKTLLRMFDDVKEKKTVHGFVKNIT 841 Query: 117 KGGFTVELNG-IRAFLPGSLVDVRPVR--DTLHLEGKELEFKVIKLDQKRNNVVVSRRAV 173 V+ G + LP + + + +R D + + +E KV+ +D + ++S Sbjct: 842 LTAVFVQFGGGLTGLLPKNKIPEKNLRLPDFGFKKYQTIEVKVLTIDHGQRRFLLSMADA 901 Query: 174 IESENSAER----------------DQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDG 216 + S E + +E++ G K V ++ D V L + G Sbjct: 902 TSDKKSNEPLAPGANQEAVNPIDETIKSIEDITLGRLTKARVSSVKDTQVNVQLADNIQG 961 Query: 217 LLHITDM--AWKRVKH---PSEIVNVGDEITVKVLKFDRERTR--------------VSL 257 + ++ +W +K P + + + V+VL R L Sbjct: 962 RIDVSQAFDSWSDIKSKKQPLKTFSPKQIVDVRVLGIHDARNHRFLPISHRSGKTLVFEL 1021 Query: 258 GLK---QLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNK 314 K Q + G+ V N+ +V I V G + ++ Sbjct: 1022 SAKPSDQTESAQDPVSLDKIKVGSSWLAFVNNVGVDCLWVNISPNVRGRISALDVSDDVS 1081 Query: 315 N-IHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKS 373 + +G + V V +D E R+ L + + + F + ++G V GK+ Sbjct: 1082 LLKDLAANFPIGSAIRVHVKGVDVETNRLDLSARSSQDSEALTF-DKLSQGMIVPGKVTR 1140 Query: 374 ITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGV 433 + + + + L I ++L+D+ + + + + Y K D + V +D +R+ L Sbjct: 1141 VNERQVMVQLTDSISAPINLTDLCDDYSEADPSK-YSKNDIVRVCVTDIDVPNKRVRLST 1199 Query: 434 KQLA--------EDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASR 485 + +DP + ++ K IV G V V KG V L V Y+R S+ S Sbjct: 1200 RASRVMNSSAAVQDPEISSISQLKVNDIVRGFVKHVADKGLFVNLGGNVTAYVRISDLSD 1259 Query: 486 DRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNN 545 ++D V V+ K T VD + LS++ + A T N + Sbjct: 1260 SYIKDWKSEFQVDQLVKGKVTVVDEVLNHVQLSLKPSVIDKDYVAPLTFNDIQVNQVVTG 1319 Query: 546 AMAE 549 + + Sbjct: 1320 KIRK 1323 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 113/596 (18%), Positives = 211/596 (35%), Gaps = 57/596 (9%) Query: 14 KEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA---QGELEIQVGDEVDV 70 + G G +V I +V +P + A ++G V+V Sbjct: 639 SYDDITVGMQSPGTIVNILNTGAVVQFYGNVRGFLPVSEMSEAYIQDPNQHFKIGQVVNV 698 Query: 71 ALDAVEDGFGETLL-SREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGI-- 127 + V+ + + ++ + A K + E V+ ++ K +VE+ G+ Sbjct: 699 HVLKVDPEAKKLTVSCKDPSVFGLAQQNALKNLKIGEIVSALVIEKSNDDISVEIQGLGL 758 Query: 128 RAFLPGSLVDVRPVRDTLH-----LEGKELE--FKVIKLDQKRNNVVVSRRAVIESENSA 180 +A LP + + G+ L + KL+ KR V+ ++ A++++ + Sbjct: 759 KAILPVGHLTDGSENKSRSSFKNIRVGQVLSDLAVLDKLEPKRLIVLTNKPALVKAAQNK 818 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGD 239 ++ ++++E V G VKN+T FV GG + GLL + K ++ P Sbjct: 819 TLLRMFDDVKEKKTVHGFVKNITLTAVFVQFGGGLTGLLPKNKIPEKNLRLPDFGFKKYQ 878 Query: 240 EITVKVLKFDRERTRVSLGLKQLGEDPWVA--------------------IAKRYPEGTK 279 I VKVL D + R L + D + G Sbjct: 879 TIEVKVLTIDHGQRRFLLSMADATSDKKSNEPLAPGANQEAVNPIDETIKSIEDITLGRL 938 Query: 280 LTGRVTNLTDYGCFVEIEEGVEGLVHVSE----MDWTNKNIHPSKVVNVGDVVEVMVLDI 335 RV+++ D V++ + ++G + VS+ P K + +V+V VL I Sbjct: 939 TKARVSSVKDTQVNVQLADNIQGRIDVSQAFDSWSDIKSKKQPLKTFSPKQIVDVRVLGI 998 Query: 336 DEERRR--------------ISLGLKQCKANPWQQFAETH---NKGDRVEGKIKSITDFG 378 + R L K Q + G + ++ Sbjct: 999 HDARNHRFLPISHRSGKTLVFELSAKPSDQTESAQDPVSLDKIKVGSSWLAFVNNVGVDC 1058 Query: 379 IFIGLDGGIDGLVHLSDISWNV-AGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLA 437 +++ + + G + D+S +V ++ + G I V VD E R+ L + Sbjct: 1059 LWVNISPNVRGRISALDVSDDVSLLKDLAANFPIGSAIRVHVKGVDVETNRLDLSARSSQ 1118 Query: 438 EDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSV 497 + + +G IV GKVT V+ + V+L D + + ++ D E S Sbjct: 1119 DSEALTF-DKLSQGMIVPGKVTRVNERQVMVQLTDSISAPINLTDLCDDYSEADPSKYSK 1177 Query: 498 GDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKA 553 D V T +D N+ + LS RA + A+ + N + F Sbjct: 1178 NDIVRVCVTDIDVPNKRVRLSTRASRVMNSSAAVQDPEISSISQLKVNDIVRGFVK 1233 Score = 210 bits (536), Expect = 8e-53, Method: Composition-based stats. Identities = 97/579 (16%), Positives = 190/579 (32%), Gaps = 71/579 (12%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA-------------- 56 E L GS+V G V I+ + + +P + Sbjct: 141 EGLSYKRLVSGSLVLGQVSQINATDIALSLPNNLTGYVPITAISDKVTERVEAIAAAEED 200 Query: 57 -----------QGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWIT-------L 98 + +G + + + D L + K + + Sbjct: 201 DADDEVEVEDIDLKKMFSLGQYLRAYVVSTSDDTNTATLGKGKRRIELSLRPQHANNGVT 260 Query: 99 EKAYEDAETVTGVINGKVKGGFTVELN----GIRAFLPGSLVDVRPVRDTLHLEGKELEF 154 + + T+ + G + + GIR F+ + V EG Sbjct: 261 PQNLINNTTLMASVTSVEDHGLIMNIGLEDTGIRGFMGAKDIGYEVV-LADVQEGAVFLC 319 Query: 155 KVIKLDQKRNNVVVSRRAV----IESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVD 210 V L V + ++ N ++ G V+ ++ +++ G Sbjct: 320 MVTGLSSNGKTVKLCADTQKIGNVKKSNYLTDAPTVDAFLPGTAVETLIVDVSSRGLTGK 379 Query: 211 LGG-VDGLLHITDMAWKRVKH--PSEIVNVGDEITVKVL----KFDRERTRVSL-----G 258 + G VD + + V + + +G ++ +V+ D ++ +SL Sbjct: 380 VMGMVDVTADLMH-SGTSVMNQELEKKFKIGAKVRGRVICTFPNSDPQKLGISLLDHVTS 438 Query: 259 LKQLG---EDPWVAIAKRYPEGTKLT-GRVTNLTDY-GCFVEIE-EGVEGLVHVSEMDWT 312 L Q V P T + + + G FV++ +G+ G VH+S + Sbjct: 439 LTQQQAGKPGNKVNPLDTLPLSTIVEEVTIKKVESGVGLFVDVGIKGIPGFVHISRVKDG 498 Query: 313 NK--NIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGK 370 + VG V VL + + L++ E G+ V+GK Sbjct: 499 KIETLEETTGPYKVGSVHRGRVLGYNSLDGVYLISLEKSVLEQPYLRIEDLKIGEVVKGK 558 Query: 371 IKS--ITDFGI---FIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAE 425 ++ + D G+ + L I GLV + ++ +++K+G + A VL D Sbjct: 559 VEKLIVNDKGVGGLLVNLAENISGLVPETHLADIQLL-HPEKKFKEGMAVTARVLSTDPG 617 Query: 426 RERISLGVKQ---LAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASE 482 + +I L +K+ +E P G G + + GA V+ V G+L SE Sbjct: 618 KRQIRLTLKKTLVNSESPALVSYDDITVGMQSPGTIVNILNTGAVVQFYGNVRGFLPVSE 677 Query: 483 ASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRA 521 S ++D +G V VD + + +++S + Sbjct: 678 MSEAYIQDPNQHFKIGQVVNVHVLKVDPEAKKLTVSCKD 716 Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats. Identities = 98/565 (17%), Positives = 196/565 (34%), Gaps = 46/565 (8%) Query: 10 EESLKEIETRPGSIVRGVVVAIDKDVVLVDAGL---KSESAIPAEQFKNAQGELEIQVGD 66 + + + V +++ ++++ GL + A+ ++Q G Sbjct: 256 NNGVTPQNLINNTTLMASVTSVEDHGLIMNIGLEDTGIRGFMGAKDIGYEVVLADVQEGA 315 Query: 67 EVDVALDAVEDGFGETLLSREKAKRHEAWI-------TLEKAYEDAETVTGVINGKVKGG 119 + + L + K A+ V +I G Sbjct: 316 VFLCMVTGLSSNGKTVKLCADTQKIGNVKKSNYLTDAPTVDAFLPGTAVETLIVDVSSRG 375 Query: 120 FTVELNG---IRAFLPGSLVDVRPVR-DTLHLEGKELEFKVI----KLDQKRNNVVVSRR 171 T ++ G + A L S V + G ++ +VI D ++ + + Sbjct: 376 LTGKVMGMVDVTADLMHSGTSVMNQELEKKFKIGAKVRGRVICTFPNSDPQKLGISLLDH 435 Query: 172 AVIESENSA----ERDQLLENLQEGMEV-KGIVKNLTDY-GAFVDLG--GVDGLLHITDM 223 ++ A + L+ L V + +K + G FVD+G G+ G +HI+ + Sbjct: 436 VTSLTQQQAGKPGNKVNPLDTLPLSTIVEEVTIKKVESGVGLFVDVGIKGIPGFVHISRV 495 Query: 224 AWKRVKHPSEI---VNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKL 280 +++ E VG +VL ++ + L++ + + G + Sbjct: 496 KDGKIETLEETTGPYKVGSVHRGRVLGYNSLDGVYLISLEKSVLEQPYLRIEDLKIGEVV 555 Query: 281 TGRVTN--LTDYGC---FVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDI 335 G+V + D G V + E + GLV + + +HP K G V VL Sbjct: 556 KGKVEKLIVNDKGVGGLLVNLAENISGLVPETHLADIQ-LLHPEKKFKEGMAVTARVLST 614 Query: 336 DEERRRISLGLKQCKAN---PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVH 392 D +R+I L LK+ N P + G + G I +I + G + G + G + Sbjct: 615 DPGKRQIRLTLKKTLVNSESPALVSYDDITVGMQSPGTIVNILNTGAVVQFYGNVRGFLP 674 Query: 393 LSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWV--ALNKK 450 +S++S ++ + +K G + VL+VD E +++++ K + K Sbjct: 675 VSEMSEAYI-QDPNQHFKIGQVVNVHVLKVDPEAKKLTVSCKDPSVFGLAQQNALKNLKI 733 Query: 451 GAIVTGKVTAVDAKGATVELAD-GVEGYLRASEASRDRVEDATLVLS---VGDEVE-AKF 505 G IV+ V +VE+ G++ L + + VG + Sbjct: 734 GEIVSALVIEKSNDDISVEIQGLGLKAILPVGHLTDGSENKSRSSFKNIRVGQVLSDLAV 793 Query: 506 TGVDRKNRAISLSVRAKDEADEKDA 530 R I L+ + ++ Sbjct: 794 LDKLEPKRLIVLTNKPALVKAAQNK 818 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 79/442 (17%), Positives = 147/442 (33%), Gaps = 41/442 (9%) Query: 148 EGKELEFKVIKLDQKRNNVVV----SRRAVIESENSAERDQLLENLQEGMEVKGIVKNLT 203 G+ L V+ N + R + A +NL + V ++ Sbjct: 219 LGQYLRAYVVSTSDDTNTATLGKGKRRIELSLRPQHANNGVTPQNLINNTTLMASVTSVE 278 Query: 204 DYGAFVDLG----GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSL-- 257 D+G +++G G+ G + D+ ++ V V G V V L Sbjct: 279 DHGLIMNIGLEDTGIRGFMGAKDIGYEVV---LADVQEGAVFLCMVTGLSSNGKTVKLCA 335 Query: 258 ------GLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDW 311 +K+ + GT + + +++ G ++ V+ + Sbjct: 336 DTQKIGNVKKSNYLTDAPTVDAFLPGTAVETLIVDVSSRGLTGKVMGMVDVTADLMHSGT 395 Query: 312 TNKNIHPSKVVNVGDVVEVMVL----DIDEERRRISL-----GLKQCKANPW---QQFAE 359 + N K +G V V+ + D ++ ISL L Q +A + Sbjct: 396 SVMNQELEKKFKIGAKVRGRVICTFPNSDPQKLGISLLDHVTSLTQQQAGKPGNKVNPLD 455 Query: 360 THNKGDRVE-GKIKSITDF-GIFIGLD-GGIDGLVHLSDISWNVA--GEEAVREYKKGDE 414 T VE IK + G+F+ + GI G VH+S + EE YK G Sbjct: 456 TLPLSTIVEEVTIKKVESGVGLFVDVGIKGIPGFVHISRVKDGKIETLEETTGPYKVGSV 515 Query: 415 IAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAK-----GATVE 469 VL ++ + +++ + + K G +V GKV + G V Sbjct: 516 HRGRVLGYNSLDGVYLISLEKSVLEQPYLRIEDLKIGEVVKGKVEKLIVNDKGVGGLLVN 575 Query: 470 LADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKD 529 LA+ + G + + + ++ G V A+ D R I L+++ E Sbjct: 576 LAENISGLVPETHLADIQLLHPEKKFKEGMAVTARVLSTDPGKRQIRLTLKKTLVNSESP 635 Query: 530 AIATVNKQEDANFSNNAMAEAF 551 A+ + + S + Sbjct: 636 ALVSYDDITVGMQSPGTIVNIL 657 Score = 57.7 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 10/87 (11%), Positives = 24/87 (27%), Gaps = 5/87 (5%) Query: 13 LKEIETRPGSIVRGVVVAIDKDVVL--VDAGLKSESAIPAEQFKN---AQGELEIQVGDE 67 L + + +V G + ++ V VD + + GD Sbjct: 1306 LTFNDIQVNQVVTGKIRKVEDFGVFIVVDGSANVSGLCHQSEMAEKRVHDVKKLYSEGDA 1365 Query: 68 VDVALDAVEDGFGETLLSREKAKRHEA 94 V + ++ S + + + Sbjct: 1366 VKAIVLKMDTEKKRISFSMKASHFEDG 1392 >UniRef50_B1C7U3 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C7U3_9FIRM Length = 666 Score = 288 bits (736), Expect = 6e-76, Method: Composition-based stats. Identities = 122/365 (33%), Positives = 206/365 (56%), Gaps = 13/365 (3%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL 60 M +SF + EES+K E R G IV G +V +D + V ++ G KS+ + F E Sbjct: 277 MVDSFEKNIEESIK--EIREGDIVEGEIVMVDHNEVTMNIGYKSDGIVKKADFLYDLMED 334 Query: 61 EIQV---GDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVK 117 GD+V V + + DG G LS+ K A ++ ++ ETV I VK Sbjct: 335 LTSKAAKGDKVKVMVMKMNDGTGNVSLSKIKVDELGALDEAKEKFDSKETVKAKITKVVK 394 Query: 118 GGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIES- 176 GG V+L I+AF+P S DVR ++D L GKE+E ++++ D+++N ++VSR+ ++E Sbjct: 395 GGLIVDLGFIKAFMPASYYDVRFIKDFDSLLGKEIECRIVEFDKQKNKIIVSRKILLEEA 454 Query: 177 ------ENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKH 230 + ++ + L+ G EV+ +KN+T++G F+DL GVDG +HI+D+AWKRV + Sbjct: 455 YKERKAKEKELKEAAIAALEIGKEVEAPIKNITNFGMFIDLNGVDGFIHISDIAWKRVGN 514 Query: 231 PSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDY 290 +++ VGD + V + D++ +V L +K L ++PW + Y G + + N T++ Sbjct: 515 INDLYKVGDSVKAIVTELDKDNYKVKLSVKDLTKEPWQEFIENYSVGQTVKATIKNTTNF 574 Query: 291 GCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCK 350 G F EI VEGL+H+S++ + + V GD V V ++DI++++R++SL +K+ Sbjct: 575 GAFAEIIPDVEGLIHISQLSHD-RVNNVEDAVKTGDEVNVKIIDINKDKRKVSLSIKETM 633 Query: 351 ANPWQ 355 P + Sbjct: 634 DPPKR 638 Score = 244 bits (623), Expect = 7e-63, Method: Composition-based stats. Identities = 84/403 (20%), Positives = 176/403 (43%), Gaps = 21/403 (5%) Query: 166 VVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMA 224 V+ + + ++ ++ ++EG V+G + + +++G DG++ D Sbjct: 269 VINTMDNNMVDSFEKNIEESIKEIREGDIVEGEIVMVDHNEVTMNIGYKSDGIVKKADFL 328 Query: 225 WKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLG-LKQLGEDPWVAIAKRYPEGTKLTGR 283 + ++ + GD++ V V+K + VSL +K +++ + + Sbjct: 329 YDLMEDLTSKAAKGDKVKVMVMKMNDGTGNVSLSKIKVDELGALDEAKEKFDSKETVKAK 388 Query: 284 VTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRIS 343 +T + G V++ ++ + S ++ G +E +++ D+++ +I Sbjct: 389 ITKVVKGGLIVDLG-FIKAFMPAS-YYDVRFIKDFDSLL--GKEIECRIVEFDKQKNKII 444 Query: 344 LGLKQCKANPWQQFAET-----------HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVH 392 + K +++ G VE IK+IT+FG+FI L G+DG +H Sbjct: 445 VSRKILLEEAYKERKAKEKELKEAAIAALEIGKEVEAPIKNITNFGMFIDL-NGVDGFIH 503 Query: 393 LSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGA 452 +SDI+W G YK GD + A+V ++D + ++ L VK L ++P+ ++ G Sbjct: 504 ISDIAWKRVG-NINDLYKVGDSVKAIVTELDKDNYKVKLSVKDLTKEPWQEFIENYSVGQ 562 Query: 453 IVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKN 512 V + GA E+ VEG + S+ S DRV + + GDEV K +++ Sbjct: 563 TVKATIKNTTNFGAFAEIIPDVEGLIHISQLSHDRVNNVEDAVKTGDEVNVKIIDINKDK 622 Query: 513 RAISLSVRAKDEADEKDAIAT--VNKQEDANFSNNAMAEAFKA 553 R +SLS++ + ++ +K++ + + K+ Sbjct: 623 RKVSLSIKETMDPPKRKIERNKLYHKEDSNVTLGDIFGDLLKS 665 Score = 88.1 bits (217), Expect = 9e-16, Method: Composition-based stats. Identities = 29/189 (15%), Positives = 58/189 (30%), Gaps = 13/189 (6%) Query: 18 TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA---QGELEIQVGDEVDVALDA 74 G V + I + +D + I +VGD V + Sbjct: 473 LEIGKEVEAPIKNITNFGMFIDLNG-VDGFIHISDIAWKRVGNINDLYKVGDSVKAIVTE 531 Query: 75 VEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL-NGIRAFLPG 133 ++ + LS + + W + Y +TV I G E+ + + Sbjct: 532 LDKDNYKVKLSVKDLTKEP-WQEFIENYSVGQTVKATIKNTTNFGAFAEIIPDVEGLIHI 590 Query: 134 SLVDVRPVRDTLHLE--GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLL----- 186 S + V + G E+ K+I +++ + V +S + ++ L Sbjct: 591 SQLSHDRVNNVEDAVKTGDEVNVKIIDINKDKRKVSLSIKETMDPPKRKIERNKLYHKED 650 Query: 187 ENLQEGMEV 195 N+ G Sbjct: 651 SNVTLGDIF 659 Score = 52.7 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 14/94 (14%), Positives = 26/94 (27%), Gaps = 3/94 (3%) Query: 16 IETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQGELEIQVGDEVDVAL 72 G V+ + + E I Q + E ++ GDEV+V + Sbjct: 556 ENYSVGQTVKATIKNTTNFGAFAEIIPDVEGLIHISQLSHDRVNNVEDAVKTGDEVNVKI 615 Query: 73 DAVEDGFGETLLSREKAKRHEAWITLEKAYEDAE 106 + + LS ++ E Sbjct: 616 IDINKDKRKVSLSIKETMDPPKRKIERNKLYHKE 649 >UniRef50_Q5HFU7 30S ribosomal protein S1 n=61 Tax=Staphylococcus RepID=RS1_STAAC Length = 391 Score = 288 bits (736), Expect = 6e-76, Method: Composition-based stats. Identities = 122/361 (33%), Positives = 200/361 (55%), Gaps = 15/361 (4%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDA-GLKSESAIPAEQFKNAQGE 59 MTE F + + + G V G V ++ V+V G K IP Q + Sbjct: 1 MTEEFNESM-----INDIKEGDKVTGEVQQVEDKQVVVHINGGKFNGIIPISQLSTHHID 55 Query: 60 ---LEIQVGDEVDVALDAVE----DGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVI 112 ++ GDEV+ + VE + G +LSR + + +++ L++ ++ E + + Sbjct: 56 SPSEVVKEGDEVEAYVTKVEFDEENETGAYILSRRQLETEKSYSYLQEKLDNNEIIEAKV 115 Query: 113 NGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRA 172 VKGG V++ G R F+P SL+ + D +G+ + KV +LD + N V++SR+A Sbjct: 116 TEVVKGGLVVDV-GQRGFVPASLISTDFIEDFSVFDGQTIRIKVEELDPENNRVILSRKA 174 Query: 173 VIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPS 232 V + EN A++DQLL++L EG + G V LT +GAF+D+GGVDGL+H+++++ + V+ P Sbjct: 175 VEQEENDAKKDQLLQSLNEGDVIDGKVARLTQFGAFIDIGGVDGLVHVSELSHEHVQTPE 234 Query: 233 EIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGC 292 E+V++G ++ VK+ DR+ R+SL +K P+ I ++ E + G V L ++G Sbjct: 235 EVVSIGQDVKVKIKSIDRDTERISLSIKDTLPTPFENIKGQFHENDVIEGVVVRLANFGA 294 Query: 293 FVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN 352 FVEI GV+GLVH+SE+ + P +V+ G V V +L IDEE R+SL +K N Sbjct: 295 FVEIAPGVQGLVHISEIAHKH-IGTPGEVLEPGQQVNVKILGIDEENERVSLSIKATLPN 353 Query: 353 P 353 Sbjct: 354 E 354 Score = 262 bits (669), Expect = 4e-68, Method: Composition-based stats. Identities = 101/395 (25%), Positives = 178/395 (45%), Gaps = 25/395 (6%) Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG--VDGLLHITDMAWKRVKHPSEIVN 236 + ++ +++EG +V G V+ + D V + G +G++ I+ ++ + PSE+V Sbjct: 3 EEFNESMINDIKEGDKVTGEVQQVEDKQVVVHINGGKFNGIIPISQLSTHHIDSPSEVVK 62 Query: 237 VGDEITVKVLKFD----RERTRVSLGLKQLG-EDPWVAIAKRYPEGTKLTGRVTNLTDYG 291 GDE+ V K + E L +QL E + + ++ + +VT + G Sbjct: 63 EGDEVEAYVTKVEFDEENETGAYILSRRQLETEKSYSYLQEKLDNNEIIEAKVTEVVKGG 122 Query: 292 CFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKA 351 V++ G G V S + T+ S V G + + V ++D E R+ L K + Sbjct: 123 LVVDV--GQRGFVPASLIS-TDFIEDFS--VFDGQTIRIKVEELDPENNRVILSRKAVEQ 177 Query: 352 NPWQQFAETH----NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVR 407 + N+GD ++GK+ +T FG FI + GG+DGLVH+S++S Sbjct: 178 EENDAKKDQLLQSLNEGDVIDGKVARLTQFGAFIDI-GGVDGLVHVSELSHEHVQT-PEE 235 Query: 408 EYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGAT 467 G ++ + +D + ERISL +K PF N + ++ G V + GA Sbjct: 236 VVSIGQDVKVKIKSIDRDTERISLSIKDTLPTPFENIKGQFHENDVIEGVVVRLANFGAF 295 Query: 468 VELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADE 527 VE+A GV+G + SE + + VL G +V K G+D +N +SLS++A ++ Sbjct: 296 VEIAPGVQGLVHISEIAHKHIGTPGEVLEPGQQVNVKILGIDEENERVSLSIKATLPNED 355 Query: 528 KDAIAT-------VNKQEDANFSNNAMAEAFKAAK 555 N++ED + + + K K Sbjct: 356 VVESDPSTTKAYLENEEEDNPTIGDMIGDKLKNLK 390 >UniRef50_C9LUH9 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LUH9_9FIRM Length = 373 Score = 287 bits (735), Expect = 8e-76, Method: Composition-based stats. Identities = 127/363 (34%), Positives = 212/363 (58%), Gaps = 7/363 (1%) Query: 5 FAQLFE-ESLKEIETRPGSIVRGVVVAIDKDVVLVDA-GLKSESAIPAEQFKNAQGE--- 59 L E E E R +V+ VVA+D V+ GLK++ I + + + + Sbjct: 1 MKSLLEAEEESMQEVREHDVVKATVVAVDDGQAYVNIAGLKADIPISKRELASPEPDSAK 60 Query: 60 LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGG 119 ++V DE++V + ++ G +S+ +A R AW +E ED +TV I VKGG Sbjct: 61 DVVKVDDEIEVFVVSLGGENG-ATVSKVRADRMVAWKEIEALKEDGQTVQAQITQVVKGG 119 Query: 120 FTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 ++G+R F+P S +++ V+D G+ +E I++D ++ +V+SRR+++E E Sbjct: 120 LVASVSGLRGFIPASQMELHFVKDLSIYVGQTVEALPIEIDIRKQRLVLSRRSLLEEERE 179 Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGD 239 +++++ L+ G ++G VK L +YGAF+D+GGVDGL HI+D+AW RVK PS++++VGD Sbjct: 180 KKQEEVFSKLEVGQIIRGTVKRLVEYGAFIDIGGVDGLAHISDLAWHRVKQPSDVLSVGD 239 Query: 240 EITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEG 299 E+ V V FD E R+SL +K DPW+ A+RY EGT + G++ LTD+G F+EIE G Sbjct: 240 EVDVYVKNFDPETKRISLSVKDTMRDPWLDKAERYAEGTHIKGKIIKLTDFGAFMEIEPG 299 Query: 300 VEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAE 359 +GL+ + E+ + + V +GD+V+V +L ID +R+RISL + + + + Sbjct: 300 FDGLIPMGELAD-RRIARADEAVQLGDIVKVKILHIDMKRKRISLSITRAQRDAEVSDVS 358 Query: 360 THN 362 + Sbjct: 359 YYK 361 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 87/373 (23%), Positives = 165/373 (44%), Gaps = 12/373 (3%) Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHIT--DMAWKRVKHPSEIVNV 237 ++ ++ ++E VK V + D A+V++ G+ + I+ ++A ++V V Sbjct: 6 EAEEESMQEVREHDVVKATVVAVDDGQAYVNIAGLKADIPISKRELASPEPDSAKDVVKV 65 Query: 238 GDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE 297 DEI V V+ E ++ W I +G + ++T + G + Sbjct: 66 DDEIEVFVVSLGGENGATVSKVRADRMVAWKEIEALKEDGQTVQAQITQVVKGGLVASVS 125 Query: 298 EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC----KANP 353 G+ G + S+M + S + VG VE + ++ID ++R+ L + + Sbjct: 126 -GLRGFIPASQM-ELHFVKDLS--IYVGQTVEALPIEIDIRKQRLVLSRRSLLEEEREKK 181 Query: 354 WQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGD 413 ++ G + G +K + ++G FI + GG+DGL H+SD++W+ ++ GD Sbjct: 182 QEEVFSKLEVGQIIRGTVKRLVEYGAFIDI-GGVDGLAHISDLAWHRV-KQPSDVLSVGD 239 Query: 414 EIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADG 473 E+ V D E +RISL VK DP+ + +G + GK+ + GA +E+ G Sbjct: 240 EVDVYVKNFDPETKRISLSVKDTMRDPWLDKAERYAEGTHIKGKIIKLTDFGAFMEIEPG 299 Query: 474 VEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIAT 533 +G + E + R+ A + +GD V+ K +D K + ISLS+ E ++ Sbjct: 300 FDGLIPMGELADRRIARADEAVQLGDIVKVKILHIDMKRKRISLSITRAQRDAEVSDVSY 359 Query: 534 VNKQEDANFSNNA 546 + + Sbjct: 360 YKDEPVTHEEGGE 372 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 60/297 (20%), Positives = 121/297 (40%), Gaps = 14/297 (4%) Query: 259 LKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVS--EMDWTNKNI 316 +K L E ++ + E + V + D +V I G++ + +S E+ + Sbjct: 1 MKSLLEAEEESM-QEVREHDVVKATVVAVDDGQAYVNIA-GLKADIPISKRELASPEPD- 57 Query: 317 HPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITD 376 VV V D +EV V+ + E ++ + W++ G V+ +I + Sbjct: 58 SAKDVVKVDDEIEVFVVSLGGENGATVSKVRADRMVAWKEIEALKEDGQTVQAQITQVVK 117 Query: 377 FGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVK-- 434 G+ + G+ G + S + + + + G + A+ +++D ++R+ L + Sbjct: 118 GGLVASVS-GLRGFIPASQMELHFVKDLS---IYVGQTVEALPIEIDIRKQRLVLSRRSL 173 Query: 435 --QLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDAT 492 + E + + G I+ G V + GA +++ GV+G S+ + RV+ + Sbjct: 174 LEEEREKKQEEVFSKLEVGQIIRGTVKRLVEYGAFIDIG-GVDGLAHISDLAWHRVKQPS 232 Query: 493 LVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAE 549 VLSVGDEV+ D + + ISLSV+ D + + + Sbjct: 233 DVLSVGDEVDVYVKNFDPETKRISLSVKDTMRDPWLDKAERYAEGTHIKGKIIKLTD 289 Score = 55.0 bits (131), Expect = 7e-06, Method: Composition-based stats. Identities = 15/99 (15%), Positives = 38/99 (38%), Gaps = 3/99 (3%) Query: 14 KEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQG---ELEIQVGDEVDV 70 K G+ ++G ++ + ++ + IP + + + + +Q+GD V V Sbjct: 270 KAERYAEGTHIKGKIIKLTDFGAFMEIEPGFDGLIPMGELADRRIARADEAVQLGDIVKV 329 Query: 71 ALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVT 109 + ++ LS +A+R + ++ T Sbjct: 330 KILHIDMKRKRISLSITRAQRDAEVSDVSYYKDEPVTHE 368 >UniRef50_UPI00017435B0 LytB protein n=1 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI00017435B0 Length = 413 Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats. Identities = 112/417 (26%), Positives = 223/417 (53%), Gaps = 10/417 (2%) Query: 122 VELNGIRAFLPGSLVDVRPVRDTLH--LEGKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 ++L F+ S V V + G E+ K+I+ D ++N + +S + + E Sbjct: 1 MDLGAASGFVHISEVSWDQVDNLHERYKIGDEVTAKIIEKDVEKNRLKLSIKQLSEDP-- 58 Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGD 239 + G V+ +VK++ D+G V + G G +H++++AW + GD Sbjct: 59 --WIAFENSHNVGDVVEAVVKDVLDFGIVVTVDGNSGFVHVSELAWHNGSKELKNYKAGD 116 Query: 240 EITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEG 299 + + K+++ + E+ V L +KQL E+PW + ++Y G + +T + D+G + +E+ Sbjct: 117 KFSAKIIQIENEKKNVKLSVKQLSENPWNTVKEKYHIGDIIEKPITEVFDFGLLISLEKD 176 Query: 300 VEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAE 359 ++GL+HVS++ + + + + GD+++ ++D ++E+ R++L +K + W E Sbjct: 177 IDGLLHVSDLSYKRE-SNLTSKYKAGDLIKFKIVDFNDEKNRVTLSVKALLDDKWDVLEE 235 Query: 360 THNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVV 419 T++ +GK+ ++ D+GIF+ L+ GI+ +H ++ SW+ + +EYK GDE+ V Sbjct: 236 TYDFDKSYKGKVMNVQDYGIFVELEKGIEVFIHKNEFSWD---KREHKEYKVGDEVEFKV 292 Query: 420 LQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLR 479 + +D +++S +KQL + P+ KKG IV ++ + A V+L D G + Sbjct: 293 IVIDKIEKKLSGSIKQLEKSPWKEVTEKYKKGNIVNTEIVEIQENFALVKLTDRFNGIVP 352 Query: 480 ASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNK 536 E + D ++D + SVGD+VEA T ++ K ++I+LS++ E +EK + + K Sbjct: 353 KRELTEDFLKDISEKFSVGDKVEAVITDINEKRKSIALSLKKVQEMEEKKELDELMK 409 Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 109/342 (31%), Positives = 177/342 (51%), Gaps = 5/342 (1%) Query: 210 DLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVA 269 DLG G +HI++++W +V + E +GDE+T K+++ D E+ R+ L +KQL EDPW+A Sbjct: 2 DLGAASGFVHISEVSWDQVDNLHERYKIGDEVTAKIIEKDVEKNRLKLSIKQLSEDPWIA 61 Query: 270 IAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVE 329 + G + V ++ D+G V + +G G VHVSE+ W + K GD Sbjct: 62 FENSHNVGDVVEAVVKDVLDFGIVVTV-DGNSGFVHVSELAW-HNGSKELKNYKAGDKFS 119 Query: 330 VMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDG 389 ++ I+ E++ + L +KQ NPW E ++ GD +E I + DFG+ I L+ IDG Sbjct: 120 AKIIQIENEKKNVKLSVKQLSENPWNTVKEKYHIGDIIEKPITEVFDFGLLISLEKDIDG 179 Query: 390 LVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNK 449 L+H+SD+S+ +YK GD I ++ + E+ R++L VK L +D ++ Sbjct: 180 LLHVSDLSYKRES-NLTSKYKAGDLIKFKIVDFNDEKNRVTLSVKALLDDKWDVLEETYD 238 Query: 450 KGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVD 509 GKV V G VEL G+E ++ +E S D+ E VGDEVE K +D Sbjct: 239 FDKSYKGKVMNVQDYGIFVELEKGIEVFIHKNEFSWDKREH--KEYKVGDEVEFKVIVID 296 Query: 510 RKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAF 551 + + +S S++ +++ K+ K N + E F Sbjct: 297 KIEKKLSGSIKQLEKSPWKEVTEKYKKGNIVNTEIVEIQENF 338 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 100/418 (23%), Positives = 203/418 (48%), Gaps = 16/418 (3%) Query: 39 DAGLKSESAIPAEQFKNAQGE---LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAW 95 D G + + + Q + ++GDEV + + LS ++ W Sbjct: 2 DLGA-ASGFVHISEVSWDQVDNLHERYKIGDEVTAKIIEKDVEKNRLKLSIKQLSEDP-W 59 Query: 96 ITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRD--TLHLEGKELE 153 I E ++ + V V+ + G V ++G F+ S + + G + Sbjct: 60 IAFENSHNVGDVVEAVVKDVLDFGIVVTVDGNSGFVHVSELAWHNGSKELKNYKAGDKFS 119 Query: 154 FKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG- 212 K+I+++ ++ NV +S + + E+ + +++ G ++ + + D+G + L Sbjct: 120 AKIIQIENEKKNVKLSVKQLSENPWNTVKEK----YHIGDIIEKPITEVFDFGLLISLEK 175 Query: 213 GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAK 272 +DGLLH++D+++KR + + GD I K++ F+ E+ RV+L +K L +D W + + Sbjct: 176 DIDGLLHVSDLSYKRESNLTSKYKAGDLIKFKIVDFNDEKNRVTLSVKALLDDKWDVLEE 235 Query: 273 RYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMV 332 Y G+V N+ DYG FVE+E+G+E +H +E W + K VGD VE V Sbjct: 236 TYDFDKSYKGKVMNVQDYGIFVELEKGIEVFIHKNEFSWDKRE---HKEYKVGDEVEFKV 292 Query: 333 LDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVH 392 + ID+ +++S +KQ + +PW++ E + KG+ V +I I + + L +G+V Sbjct: 293 IVIDKIEKKLSGSIKQLEKSPWKEVTEKYKKGNIVNTEIVEIQENFALVKLTDRFNGIVP 352 Query: 393 LSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKK 450 +++ + ++ ++ GD++ AV+ ++ +R+ I+L +K++ E + K Sbjct: 353 KRELTEDF-LKDISEKFSVGDKVEAVITDINEKRKSIALSLKKVQEMEEKKELDELMK 409 Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats. Identities = 81/356 (22%), Positives = 162/356 (45%), Gaps = 16/356 (4%) Query: 15 EIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE---IQVGDEVDVA 71 E G +V VV + ++V S + + G E + GD+ Sbjct: 63 ENSHNVGDVVEAVVKDVLDFGIVVTVDGNS-GFVHVSELAWHNGSKELKNYKAGDKFSAK 121 Query: 72 LDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNG-IRAF 130 + +E+ LS ++ + W T+++ Y + + I G + L I Sbjct: 122 IIQIENEKKNVKLSVKQLSENP-WNTVKEKYHIGDIIEKPITEVFDFGLLISLEKDIDGL 180 Query: 131 LPGSLVDVRPVRDT--LHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLEN 188 L S + + + + G ++FK++ + ++N V +S +A+++ + D L E Sbjct: 181 LHVSDLSYKRESNLTSKYKAGDLIKFKIVDFNDEKNRVTLSVKALLDDK----WDVLEET 236 Query: 189 LQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLK 247 KG V N+ DYG FV+L G++ +H + +W + +H + VGDE+ KV+ Sbjct: 237 YDFDKSYKGKVMNVQDYGIFVELEKGIEVFIHKNEFSWDKREH--KEYKVGDEVEFKVIV 294 Query: 248 FDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVS 307 D+ ++S +KQL + PW + ++Y +G + + + + V++ + G+V Sbjct: 295 IDKIEKKLSGSIKQLEKSPWKEVTEKYKKGNIVNTEIVEIQENFALVKLTDRFNGIVPKR 354 Query: 308 EMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNK 363 E+ + S+ +VGD VE ++ DI+E+R+ I+L LK+ + ++ + K Sbjct: 355 ELT-EDFLKDISEKFSVGDKVEAVITDINEKRKSIALSLKKVQEMEEKKELDELMK 409 Score = 79.2 bits (194), Expect = 4e-13, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 69/172 (40%), Gaps = 5/172 (2%) Query: 24 VRGVVVAIDKDVVLVDAGLKSESAIPAEQFK-NAQGELEIQVGDEVDVALDAVEDGFGET 82 +G V+ + + V+ E I +F + + E +VGDEV+ + ++ + Sbjct: 243 YKGKVMNVQDYGIFVELEKGIEVFIHKNEFSWDKREHKEYKVGDEVEFKVIVIDKIEKKL 302 Query: 83 LLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL-NGIRAFLPGSLVDVRPV 141 K W + + Y+ V I + V+L + +P + + Sbjct: 303 S-GSIKQLEKSPWKEVTEKYKKGNIVNTEIVEIQENFALVKLTDRFNGIVPKRELTEDFL 361 Query: 142 RDTLHL--EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQE 191 +D G ++E + +++KR ++ +S + V E E E D+L++ Sbjct: 362 KDISEKFSVGDKVEAVITDINEKRKSIALSLKKVQEMEEKKELDELMKVYGV 413 >UniRef50_Q0TNG2 Ribosomal protein S1 family n=9 Tax=Clostridium perfringens RepID=Q0TNG2_CLOP1 Length = 378 Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats. Identities = 124/366 (33%), Positives = 213/366 (58%), Gaps = 5/366 (1%) Query: 1 MTESF-AQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE 59 M+E+ +S + G IV+G V+++ D ++V+ G ++ +P + N + Sbjct: 1 MSENLTMSELMDSFELKHFHKGEIVKGKVISVKNDEIIVNIGHFADGVVPRNEISNDKNF 60 Query: 60 LE--IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVK 117 I V D++ V + + +DG G LLS+++A + W L++A+E+ +++ + VK Sbjct: 61 DINSINVDDDIFVMVLSGDDGEGNVLLSKKRADAIKVWDDLKEAFEEEKSIKVSLKEVVK 120 Query: 118 GGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESE 177 GG + NG+R F+P S R + + L GK LE +VI+ +++ VVVSRR + E Sbjct: 121 GGIVGDFNGLRVFMPASQCAGRRIENLEELVGKTLEVRVIEFNKENRKVVVSRRVIDEEI 180 Query: 178 NSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNV 237 + E+ L +++EG + KG V L +GAFVD+GGV+GL+H++DM+W RV P E+V+V Sbjct: 181 RNNEKKALWSSIKEGEKRKGKVTRLAKFGAFVDIGGVEGLVHLSDMSWSRVHKPEEVVSV 240 Query: 238 GDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE 297 GDE+ V V + D +R R++L LK + ++PW + + G ++G+VTN G FVE+ Sbjct: 241 GDEVEVFVSEVDMDRERIALSLKDVIKNPWETL-EGLKVGDVVSGKVTNFIKVGAFVEVL 299 Query: 298 EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQF 357 G+EGLVH+SE+ N PS ++ +G V+V +L+ID+E +++SL +K + Sbjct: 300 PGIEGLVHISEITDEN-IAKPSDILELGQEVKVKILNIDDENKKMSLSIKDAVETSNEYM 358 Query: 358 AETHNK 363 + Sbjct: 359 QYNDEE 364 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 97/381 (25%), Positives = 185/381 (48%), Gaps = 20/381 (5%) Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSEIVNV 237 L++ +G VKG V ++ + V++G DG++ +++ + + I NV Sbjct: 9 ELMDSFELKHFHKGEIVKGKVISVKNDEIIVNIGHFADGVVPRNEISNDKNFDINSI-NV 67 Query: 238 GDEITVKVLKFDRERTRVSLGLKQLGEDP-WVAIAKRYPEGTKLTGRVTNLTDYGCFVEI 296 D+I V VL D V L K+ W + + + E + + + G + Sbjct: 68 DDDIFVMVLSGDDGEGNVLLSKKRADAIKVWDDLKEAFEEEKSIKVSLKEVVKGGIVGDF 127 Query: 297 EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKA----N 352 G+ + S+ + + ++V G +EV V++ ++E R++ + + N Sbjct: 128 -NGLRVFMPASQCA-GRRIENLEELV--GKTLEVRVIEFNKENRKVVVSRRVIDEEIRNN 183 Query: 353 PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKG 412 + + +G++ +GK+ + FG F+ + GG++GLVHLSD+SW+ + G Sbjct: 184 EKKALWSSIKEGEKRKGKVTRLAKFGAFVDI-GGVEGLVHLSDMSWSRVHK-PEEVVSVG 241 Query: 413 DEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELAD 472 DE+ V +VD +RERI+L +K + ++P+ K G +V+GKVT GA VE+ Sbjct: 242 DEVEVFVSEVDMDRERIALSLKDVIKNPWETL-EGLKVGDVVSGKVTNFIKVGAFVEVLP 300 Query: 473 GVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIA 532 G+EG + SE + + + + +L +G EV+ K +D +N+ +SLS++ E + Sbjct: 301 GIEGLVHISEITDENIAKPSDILELGQEVKVKILNIDDENKKMSLSIKDAVET--SNEYM 358 Query: 533 TVNKQEDANFSNNAMAEAFKA 553 N +E+ ++A+ FK Sbjct: 359 QYNDEEE----GYSLADLFKG 375 >UniRef50_UPI00016C0B56 30S ribosomal protein S1 n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0B56 Length = 373 Score = 286 bits (731), Expect = 2e-75, Method: Composition-based stats. Identities = 111/361 (30%), Positives = 203/361 (56%), Gaps = 4/361 (1%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL- 60 F ++++ + G I + V ++++ + G +++ +P ++ N + + Sbjct: 14 MADFMSEVDKTMA--KIHRGDIRKATVQVVEENGIXASIGYHTDAYLPWREYSNREFDKS 71 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 E+++GDE +V++ ++DG G L+S++K + +++ +EK +++ E VT + +KGG Sbjct: 72 EVKIGDEFNVSILRLDDGDGNVLISKKKVENEKSYDDIEKMFKNKEIVTVKLKDVIKGGL 131 Query: 121 TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 T + G+RAF+PGS + V D GK ++ ++I+ ++ ++VS +A+ + Sbjct: 132 TTSIKGVRAFIPGSQITDTYVEDLHSYVGKSIDVQIIEFVPQKRKLIVSGKALAKQRRLE 191 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 +R L+ LQEG + G + L +YGAFVDL G++GL+H +D++W R+KHP +IV G E Sbjct: 192 KRQARLDQLQEGEKYIGKITKLMNYGAFVDLDGIEGLIHNSDLSWSRIKHPKDIVQEGQE 251 Query: 241 ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV 300 + V ++ DRE +++L LK + DPW EG + G VT +G FV I +GV Sbjct: 252 VEVSIISIDRENGKIALALKDINNDPWENTVANLEEGQLVKGIVTRFALFGAFVRIADGV 311 Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAET 360 EGL+H+S++ T + P V+ G VEV ++ ID+ +RISL L + + Sbjct: 312 EGLIHISQIS-TPRPTKPQDVLTSGQEVEVKIIKIDKAEKRISLSLIAALDEIDPETKKM 370 Query: 361 H 361 + Sbjct: 371 Y 371 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 93/359 (25%), Positives = 169/359 (47%), Gaps = 14/359 (3%) Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEI 241 D+ + + G K V+ + + G +G D L + + + V +GDE Sbjct: 22 DKTMAKIHRGDIRKATVQVVEENGIXASIGYHTDAYLPWREYSNREFDKSE--VKIGDEF 79 Query: 242 TVKVLKFDRERTRVSLGLKQLG-EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV 300 V +L+ D V + K++ E + I K + +T ++ ++ G I+ GV Sbjct: 80 NVSILRLDDGDGNVLISKKKVENEKSYDDIEKMFKNKEIVTVKLKDVIKGGLTTSIK-GV 138 Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLG----LKQCKANPWQQ 356 + S++ T V G ++V +++ ++R++ + KQ + Q Sbjct: 139 RAFIPGSQITDTY-VEDLHSYV--GKSIDVQIIEFVPQKRKLIVSGKALAKQRRLEKRQA 195 Query: 357 FAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIA 416 + +G++ GKI + ++G F+ LD GI+GL+H SD+SW+ + ++G E+ Sbjct: 196 RLDQLQEGEKYIGKITKLMNYGAFVDLD-GIEGLIHNSDLSWSRI-KHPKDIVQEGQEVE 253 Query: 417 AVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEG 476 ++ +D E +I+L +K + DP+ N VA ++G +V G VT GA V +ADGVEG Sbjct: 254 VSIISIDRENGKIALALKDINNDPWENTVANLEEGQLVKGIVTRFALFGAFVRIADGVEG 313 Query: 477 YLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVN 535 + S+ S R VL+ G EVE K +D+ + ISLS+ A + + + Sbjct: 314 LIHISQISTPRPTKPQDVLTSGQEVEVKIIKIDKAEKRISLSLIAALDEIDPETKKMYM 372 Score = 152 bits (385), Expect = 3e-35, Method: Composition-based stats. Identities = 49/283 (17%), Positives = 109/283 (38%), Gaps = 13/283 (4%) Query: 271 AKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEV 330 + G V + + G I + + E + V +GD V Sbjct: 25 MAKIHRGDIRKATVQVVEENGIXASIGYHTDAYLPWREYSNREFDKS---EVKIGDEFNV 81 Query: 331 MVLDIDEERRRISLGLKQCK-ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDG 389 +L +D+ + + K+ + + + + V K+K + G+ + G+ Sbjct: 82 SILRLDDGDGNVLISKKKVENEKSYDDIEKMFKNKEIVTVKLKDVIKGGLTTSI-KGVRA 140 Query: 390 LVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLG----VKQLAEDPFNNWV 445 + S I+ + G I +++ ++ ++ + KQ + + Sbjct: 141 FIPGSQITDTYVEDL---HSYVGKSIDVQIIEFVPQKRKLIVSGKALAKQRRLEKRQARL 197 Query: 446 ALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKF 505 ++G GK+T + GA V+L DG+EG + S+ S R++ ++ G EVE Sbjct: 198 DQLQEGEKYIGKITKLMNYGAFVDL-DGIEGLIHNSDLSWSRIKHPKDIVQEGQEVEVSI 256 Query: 506 TGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMA 548 +DR+N I+L+++ + ++ +A + + + A Sbjct: 257 ISIDRENGKIALALKDINNDPWENTVANLEEGQLVKGIVTRFA 299 Score = 95.4 bits (236), Expect = 6e-18, Method: Composition-based stats. Identities = 31/187 (16%), Positives = 72/187 (38%), Gaps = 8/187 (4%) Query: 7 QLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA---QGELEIQ 63 +L + + + + G G + + VD E I + + +Q Sbjct: 189 RLEKRQARLDQLQEGEKYIGKITKLMNYGAFVDLDG-IEGLIHNSDLSWSRIKHPKDIVQ 247 Query: 64 VGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVE 123 G EV+V++ +++ G+ L+ + W E+ + V G++ G V Sbjct: 248 EGQEVEVSIISIDRENGKIALALKDINNDP-WENTVANLEEGQLVKGIVTRFALFGAFVR 306 Query: 124 L-NGIRAFLPGSLVDVRPVRDTLHLE--GKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 + +G+ + S + + G+E+E K+IK+D+ + +S A ++ + Sbjct: 307 IADGVEGLIHISQISTPRPTKPQDVLTSGQEVEVKIIKIDKAEKRISLSLIAALDEIDPE 366 Query: 181 ERDQLLE 187 + + Sbjct: 367 TKKMYMA 373 Score = 75.0 bits (183), Expect = 7e-12, Method: Composition-based stats. Identities = 34/203 (16%), Positives = 77/203 (37%), Gaps = 8/203 (3%) Query: 351 ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYK 410 + + ++GD + ++ + + GI + D + + S + E K Sbjct: 18 MSEVDKTMAKIHRGDIRKATVQVVEENGIXASIGYHTDAYLPWREYSNREFDK---SEVK 74 Query: 411 KGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVA-LNKKGAIVTGKVTAVDAKGATVE 469 GDE +L++D + + K++ + + + + K IVT K+ V G T Sbjct: 75 IGDEFNVSILRLDDGDGNVLISKKKVENEKSYDDIEKMFKNKEIVTVKLKDVIKGGLTTS 134 Query: 470 LADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKD 529 + GV ++ S+ + VED VG ++ + + R + +S +A + + Sbjct: 135 IK-GVRAFIPGSQITDTYVEDLHSY--VGKSIDVQIIEFVPQKRKLIVSGKALAKQRRLE 191 Query: 530 AIATVNKQ-EDANFSNNAMAEAF 551 Q ++ + + Sbjct: 192 KRQARLDQLQEGEKYIGKITKLM 214 >UniRef50_Q5M0R3 30S ribosomal protein S1 n=88 Tax=Bacilli RepID=Q5M0R3_STRT1 Length = 417 Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats. Identities = 122/360 (33%), Positives = 196/360 (54%), Gaps = 14/360 (3%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDA-GLKSESAIPAEQF---KNAQ 57 F +L E G +V V+++D D V G E + + ++A Sbjct: 18 MNEFEELLN---SVSEVSTGDVVTAEVISVDNDQANVVIEGTGIEGVLTRRELTNDRDAN 74 Query: 58 GELEIQVGDEVDVALD----AVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVIN 113 ++ G+ ++V + + L+S+++ + +AW L E+ TV G Sbjct: 75 VADLVKDGETLEVLVLRQVVGKDTDTVTYLVSKKRLEARKAWDKLVGREEEVVTVKG--T 132 Query: 114 GKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAV 173 VKGG +VE G+R F+P S++D R VR+T G+E + K+ ++D N ++SRR V Sbjct: 133 RAVKGGLSVEFEGLRGFIPASMIDTRFVRNTEQFVGQEFDAKIKEVDPAENRFILSRREV 192 Query: 174 IESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSE 233 +E+E R ++ L+ G V G V LT +GAF+DLGGVDGL+H+T+++ +R P Sbjct: 193 VEAEAIEARKEVFSKLEVGSVVTGKVARLTSFGAFIDLGGVDGLVHVTELSHERNVSPKS 252 Query: 234 IVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCF 293 +V+VGDEI VKVL D E RVSL LK PW + ++ G + G+V LTD+G F Sbjct: 253 VVSVGDEIEVKVLAIDEEAGRVSLSLKATTPGPWDGVEQKLAAGDVIEGKVKRLTDFGGF 312 Query: 294 VEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP 353 VE+ G++GLVH+S++ + +P V++VG V V VL+++ + R+SL +K + P Sbjct: 313 VEVLPGIDGLVHISQISH-KRVENPKDVLSVGQDVTVKVLEVNADAERVSLSIKALEERP 371 Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 94/377 (24%), Positives = 157/377 (41%), Gaps = 17/377 (4%) Query: 174 IESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG--VDGLLHITDMAWKRVKHP 231 E + + G V V ++ + A V + G ++G+L ++ R + Sbjct: 16 FRMNEFEELLNSVSEVSTGDVVTAEVISVDNDQANVVIEGTGIEGVLTRRELTNDRDANV 75 Query: 232 SEIVNVGDEITVKVL----KFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNL 287 +++V G+ + V VL D + + K+L E +T + T Sbjct: 76 ADLVKDGETLEVLVLRQVVGKDTDTVTYLVSKKRLEARKAWDKLVGREE-EVVTVKGTRA 134 Query: 288 TDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLK 347 G VE E G+ G + S M T + + V G + + ++D R L + Sbjct: 135 VKGGLSVEFE-GLRGFIPAS-MIDTRFVRNTEQFV--GQEFDAKIKEVDPAENRFILSRR 190 Query: 348 QCKA----NPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGE 403 + ++ G V GK+ +T FG FI L GG+DGLVH++++S Sbjct: 191 EVVEAEAIEARKEVFSKLEVGSVVTGKVARLTSFGAFIDL-GGVDGLVHVTELSHER-NV 248 Query: 404 EAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDA 463 GDEI VL +D E R+SL +K P++ G ++ GKV + Sbjct: 249 SPKSVVSVGDEIEVKVLAIDEEAGRVSLSLKATTPGPWDGVEQKLAAGDVIEGKVKRLTD 308 Query: 464 KGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKD 523 G VE+ G++G + S+ S RVE+ VLSVG +V K V+ +SLS++A + Sbjct: 309 FGGFVEVLPGIDGLVHISQISHKRVENPKDVLSVGQDVTVKVLEVNADAERVSLSIKALE 368 Query: 524 EADEKDAIATVNKQEDA 540 E K++ Sbjct: 369 ERPANAEGENNEKRQSR 385 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 61/282 (21%), Positives = 116/282 (41%), Gaps = 16/282 (5%) Query: 277 GTKLTGRVTNLTDYGCFVEIEE-GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEV----M 331 G +T V ++ + V IE G+EG++ E+ ++ + + +V G+ +EV Sbjct: 34 GDVVTAEVISVDNDQANVVIEGTGIEGVLTRRELTND-RDANVADLVKDGETLEVLVLRQ 92 Query: 332 VLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLV 391 V+ D + + K+ +A + + V K G+ + + G+ G + Sbjct: 93 VVGKDTDTVTYLVSKKRLEARK-AWDKLVGREEEVVTVKGTRAVKGGLSVEFE-GLRGFI 150 Query: 392 HLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDP----FNNWVAL 447 S I G E A + +VD R L +++ E + Sbjct: 151 PASMIDTRFVRNTEQF---VGQEFDAKIKEVDPAENRFILSRREVVEAEAIEARKEVFSK 207 Query: 448 NKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTG 507 + G++VTGKV + + GA ++L GV+G + +E S +R V+SVGDE+E K Sbjct: 208 LEVGSVVTGKVARLTSFGAFIDLG-GVDGLVHVTELSHERNVSPKSVVSVGDEIEVKVLA 266 Query: 508 VDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAE 549 +D + +SLS++A + + + + Sbjct: 267 IDEEAGRVSLSLKATTPGPWDGVEQKLAAGDVIEGKVKRLTD 308 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 36/175 (20%), Positives = 77/175 (44%), Gaps = 8/175 (4%) Query: 15 EIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ---GELEIQVGDEVDVA 71 + GS+V G V + +D G + + + + + + + VGDE++V Sbjct: 205 FSKLEVGSVVTGKVARLTSFGAFIDLGG-VDGLVHVTELSHERNVSPKSVVSVGDEIEVK 263 Query: 72 LDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL-NGIRAF 130 + A+++ G LS + A W +E+ + + G + G VE+ GI Sbjct: 264 VLAIDEEAGRVSLSLK-ATTPGPWDGVEQKLAAGDVIEGKVKRLTDFGGFVEVLPGIDGL 322 Query: 131 LPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERD 183 + S + + V + + G+++ KV++++ V +S +A+ E +AE + Sbjct: 323 VHISQISHKRVENPKDVLSVGQDVTVKVLEVNADAERVSLSIKALEERPANAEGE 377 >UniRef50_P38494 30S ribosomal protein S1 homolog n=22 Tax=Bacillales RepID=RS1H_BACSU Length = 382 Score = 284 bits (727), Expect = 5e-75, Method: Composition-based stats. Identities = 131/364 (35%), Positives = 203/364 (55%), Gaps = 13/364 (3%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDA-GLKSESAIPAEQFKNAQGE 59 MTE Q+ G +V+G+V ++ V V+ +K IP + + E Sbjct: 1 MTEEMNQI-----DVQVPEVGDVVKGIVTKVEDKHVDVEIINVKQSGIIPISELSSLHVE 55 Query: 60 ---LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKV 116 ++V DE+D+ + VED +LS+ AW LEK +E E + V Sbjct: 56 KASDVVKVDDELDLKVTKVEDDA--LILSKRAVDADRAWEDLEKKFETKEVFEAEVKDVV 113 Query: 117 KGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIES 176 KGG V++ G+R F+P SLV+ V D +GK L V++LD+ +N V++S RAV+ES Sbjct: 114 KGGLVVDI-GVRGFIPASLVEAHFVEDFTDYKGKTLSLLVVELDRDKNRVILSHRAVVES 172 Query: 177 ENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVN 236 E + ++ +LL++L+ G + G V+ LTD+GAFVD+GG+DGL+HI+ ++ V+ PS++V Sbjct: 173 EQANKKQELLQSLEVGSVLDGKVQRLTDFGAFVDIGGIDGLVHISQLSHSHVEKPSDVVE 232 Query: 237 VGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI 296 G E+ VKVL DR+ R+SL +K PW I ++ G L G V L +G FVEI Sbjct: 233 EGQEVKVKVLSVDRDNERISLSIKDTLPGPWNQIGEKVKPGDVLEGTVQRLVSFGAFVEI 292 Query: 297 EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQ 356 GVEGLVH+S++ + P +V+ G V+V VLD++E RISL +++ + P Sbjct: 293 LPGVEGLVHISQISNKH-IGTPHEVLEEGQTVKVKVLDVNENEERISLSMRELEETPKAD 351 Query: 357 FAET 360 + Sbjct: 352 QEDY 355 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 101/387 (26%), Positives = 179/387 (46%), Gaps = 17/387 (4%) Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVD--GLLHITDMAWKRVKHPSEIVN 236 ++ + G VKGIV + D V++ V G++ I++++ V+ S++V Sbjct: 3 EEMNQIDVQVPEVGDVVKGIVTKVEDKHVDVEIINVKQSGIIPISELSSLHVEKASDVVK 62 Query: 237 VGDEITVKVLKFDRERTRVSLGLKQLG-EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVE 295 V DE+ +KV K E + L + + + W + K++ V ++ G V+ Sbjct: 63 VDDELDLKVTKV--EDDALILSKRAVDADRAWEDLEKKFETKEVFEAEVKDVVKGGLVVD 120 Query: 296 IEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC----KA 351 I GV G + S + + + G + ++V+++D ++ R+ L + +A Sbjct: 121 I--GVRGFIPAS-LVEAHFVEDFTDY--KGKTLSLLVVELDRDKNRVILSHRAVVESEQA 175 Query: 352 NPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKK 411 N Q+ ++ G ++GK++ +TDFG F+ + GGIDGLVH+S +S + + ++ Sbjct: 176 NKKQELLQSLEVGSVLDGKVQRLTDFGAFVDI-GGIDGLVHISQLSHSHVEK-PSDVVEE 233 Query: 412 GDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELA 471 G E+ VL VD + ERISL +K P+N K G ++ G V + + GA VE+ Sbjct: 234 GQEVKVKVLSVDRDNERISLSIKDTLPGPWNQIGEKVKPGDVLEGTVQRLVSFGAFVEIL 293 Query: 472 DGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAI 531 GVEG + S+ S + VL G V+ K V+ ISLS+R +E + D Sbjct: 294 PGVEGLVHISQISNKHIGTPHEVLEEGQTVKVKVLDVNENEERISLSMRELEETPKADQE 353 Query: 532 ATVNKQEDANFSNN-AMAEAFKAAKGE 557 Q S + + + Sbjct: 354 DYRQYQAKEETSTGFQLGDLIGDKLNK 380 Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 3/106 (2%) Query: 436 LAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELAD-GVEGYLRASEASRDRVEDATLV 494 + E+ V + + G +V G VT V+ K VE+ + G + SE S VE A+ V Sbjct: 1 MTEEMNQIDVQVPEVGDVVKGIVTKVEDKHVDVEIINVKQSGIIPISELSSLHVEKASDV 60 Query: 495 LSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDA 540 + V DE++ K T V+ + LS RA D + + + ++ Sbjct: 61 VKVDDELDLKVTKVEDDA--LILSKRAVDADRAWEDLEKKFETKEV 104 >UniRef50_A2R624 Function: RRP5 is required for formation of both 18S and 5. 8S rRNA in yeast n=24 Tax=Leotiomyceta RepID=A2R624_ASPNC Length = 1822 Score = 284 bits (726), Expect = 7e-75, Method: Composition-based stats. Identities = 114/573 (19%), Positives = 216/573 (37%), Gaps = 70/573 (12%) Query: 16 IETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE---IQVGDEVDVAL 72 + + G+ V G + I + V V+ +P + + G V + Sbjct: 835 EDLKEGADVTGFIRNITMNGVFVEFLGGVIGLVPKRLVGDENVNKPDYGMARGQVVTATV 894 Query: 73 DAVEDGFGETLLSREKAKRHEAWITLEKA-------------------------YEDAET 107 +V+ F +LS A+ A + A + Sbjct: 895 HSVDADFQRFILSMNPAEATHAGAKKKAAAKPEPTPTDDAVANAIDEGIKSMSDFTFGRV 954 Query: 108 VTGVINGKVKGGFTVEL-NGIRAFLPGSLV--DVRPVRDTLHLE-----GKELEFKVIKL 159 I V+L + I+ + S V ++D + + +++ + Sbjct: 955 TKCKIVSVRATQVNVQLADNIQGRIDVSEVFDKWEDIKDRKQPLRFFRPKQIISARILGI 1014 Query: 160 D--QKRNNVVVSRR-----------AVIESENSAERDQLLENLQEGMEVKGIVKNLTDYG 206 + + +S R + + LE +Q G G V N+ D Sbjct: 1015 HDARNHKFLPISHRSGKFPVFELSVKPSFLQAANPSPLNLEQVQVGSTWVGFVNNVADDC 1074 Query: 207 AFVDL-GGVDGLLHITDMAWKR--VKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLG 263 +++L V G L + D + + + VG + V V D ++ R+ L KQ Sbjct: 1075 LWINLSPNVRGRLRLMDASDDLSLLADVEKHYPVGSAMKVHVSAVDADKGRLDLSAKQRS 1134 Query: 264 EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVN 323 + + + G L GRVT +T+ +++ + + G V + +M +P+ V Sbjct: 1135 DK---LVFEDVSVGMILPGRVTKVTERQVIMQLSKSIVGAVDLIDMADDYTKANPT-VCQ 1190 Query: 324 VGDVVEVMVLDIDEERRRISLGLKQCK--------ANPWQQFAETHNKGDRVEGKIKSIT 375 +V+ V+ ID+ ++ISL L+ K + + D V G ++ + Sbjct: 1191 KNEVLRACVIAIDKANKKISLSLRPSKVLSSSLPVQDKEITSIKQLKVNDIVRGFVRRVA 1250 Query: 376 DFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQ 435 D G+F+ + + V +SD+S + +E ++ + V D+E+ ++ + +K+ Sbjct: 1251 DNGLFVTVGRDVTAYVRISDLSDSY-LKEWKDSFQVDQLVKGRVTVSDSEQGKLQMSLKE 1309 Query: 436 LAEDPFNNWV---ALNKKGAIVTGKVTAVDAKGATVELAD--GVEGYLRASEASRDRVED 490 DP K G +VTGKV V+ GA + + + G SE + +RVED Sbjct: 1310 SVLDPNYKAPLTLHDLKPGQVVTGKVRKVEEFGAFIVIDGSKNISGLCHRSEMAENRVED 1369 Query: 491 ATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKD 523 A + GD V+AK +DRK IS ++A Sbjct: 1370 ARTLYEEGDAVKAKILKIDRKQEKISFGLKASY 1402 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 101/616 (16%), Positives = 212/616 (34%), Gaps = 75/616 (12%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAG-LKSESAIPAEQFKNAQGEL- 60 E+F + + ++ PG +V G V D L+ + + E + Sbjct: 728 ETFTEAYRKAF--ENIHPGMLVSGTVFEKSADDTLLKLDDYGLVARLNVEHVADGSPSKQ 785 Query: 61 -----EIQVGDEV-DVALDAVEDGFGETLLS----REKAKRHEAWITLEKAYEDAETVTG 110 +I+VG ++ ++ + ++ ++ +KA +H + + + ++ VTG Sbjct: 786 ASTLSKIRVGQKLNELMVIDIQRAHRLIKVTGRQSLKKAAKHGSIPSEIEDLKEGADVTG 845 Query: 111 VINGKVKGGFTVEL-NGIRAFLPGSLVDVRPVRDTLHLE--GKELEFKVIKLDQKRNNVV 167 I G VE G+ +P LV V + G+ + V +D + Sbjct: 846 FIRNITMNGVFVEFLGGVIGLVPKRLVGDENVNKPDYGMARGQVVTATVHSVDADFQRFI 905 Query: 168 VSRRAVIE----------------------SENSAERDQLLENLQEGMEVKGIVKNLTDY 205 +S + E + + + G K + ++ Sbjct: 906 LSMNPAEATHAGAKKKAAAKPEPTPTDDAVANAIDEGIKSMSDFTFGRVTKCKIVSVRAT 965 Query: 206 GAFVDL-GGVDGLLHITDMAWKRV-----KHPSEIVNVGDEITVKVLKFDRERTR----- 254 V L + G + ++++ K K P I+ ++L R Sbjct: 966 QVNVQLADNIQGRIDVSEVFDKWEDIKDRKQPLRFFRPKQIISARILGIHDARNHKFLPI 1025 Query: 255 ---------VSLGLKQLGED---PWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 L +K P ++ G+ G V N+ D ++ + V G Sbjct: 1026 SHRSGKFPVFELSVKPSFLQAANPSPLNLEQVQVGSTWVGFVNNVADDCLWINLSPNVRG 1085 Query: 303 LVHVSEMDWT-NKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETH 361 + + + + K VG ++V V +D ++ R+ L K + E Sbjct: 1086 RLRLMDASDDLSLLADVEKHYPVGSAMKVHVSAVDADKGRLDLS---AKQRSDKLVFEDV 1142 Query: 362 NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQ 421 + G + G++ +T+ + + L I G V L D++ + +K + + A V+ Sbjct: 1143 SVGMILPGRVTKVTERQVIMQLSKSIVGAVDLIDMADDYTKANP-TVCQKNEVLRACVIA 1201 Query: 422 VDAERERISLGVKQ--------LAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADG 473 +D ++ISL ++ +D + K IV G V V G V + Sbjct: 1202 IDKANKKISLSLRPSKVLSSSLPVQDKEITSIKQLKVNDIVRGFVRRVADNGLFVTVGRD 1261 Query: 474 VEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIAT 533 V Y+R S+ S +++ V V+ + T D + + +S++ A T Sbjct: 1262 VTAYVRISDLSDSYLKEWKDSFQVDQLVKGRVTVSDSEQGKLQMSLKESVLDPNYKAPLT 1321 Query: 534 VNKQEDANFSNNAMAE 549 ++ + + + Sbjct: 1322 LHDLKPGQVVTGKVRK 1337 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 111/600 (18%), Positives = 213/600 (35%), Gaps = 65/600 (10%) Query: 14 KEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE---IQVGDEVDV 70 E PG+ G ++ I +V +P + A + ++G V+V Sbjct: 649 DYEEITPGTQSPGTIIKIQPHGAVVQFYGPIRGFLPVSEMSEAYIKDPSQHFRLGQVVNV 708 Query: 71 ALDAVEDGFGETLL-SREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN--GI 127 +V+ + + ++ EA+ + V+G + K ++L+ G+ Sbjct: 709 HALSVDASREKLAVSCKDPETFTEAYRKAFENIHPGMLVSGTVFEKSADDTLLKLDDYGL 768 Query: 128 RAFLPGSLVDVRPVRDTLH-----LEGKEL-EFKVIKLDQKRNNVVVSRRAVIESENSA- 180 A L V G++L E VI + + + V+ R ++ Sbjct: 769 VARLNVEHVADGSPSKQASTLSKIRVGQKLNELMVIDIQRAHRLIKVTGRQSLKKAAKHG 828 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVD-LGGVDGLLHITDMAWKRVKHPSEIVNVGD 239 +E+L+EG +V G ++N+T G FV+ LGGV GL+ + + V P + G Sbjct: 829 SIPSEIEDLKEGADVTGFIRNITMNGVFVEFLGGVIGLVPKRLVGDENVNKPDYGMARGQ 888 Query: 240 EITVKVLKFDRERTRVSLGLKQLGEDPWVAI--------------------------AKR 273 +T V D + R L + A Sbjct: 889 VVTATVHSVDADFQRFILSMNPAEATHAGAKKKAAAKPEPTPTDDAVANAIDEGIKSMSD 948 Query: 274 YPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIH----PSKVVNVGDVVE 329 + G ++ ++ V++ + ++G + VSE+ ++I P + ++ Sbjct: 949 FTFGRVTKCKIVSVRATQVNVQLADNIQGRIDVSEVFDKWEDIKDRKQPLRFFRPKQIIS 1008 Query: 330 VMVLDIDEERRR--------------ISLGLKQC---KANPWQQFAETHNKGDRVEGKIK 372 +L I + R L +K ANP E G G + Sbjct: 1009 ARILGIHDARNHKFLPISHRSGKFPVFELSVKPSFLQAANPSPLNLEQVQVGSTWVGFVN 1068 Query: 373 SITDFGIFIGLDGGIDGLVHLSDISWN-VAGEEAVREYKKGDEIAAVVLQVDAERERISL 431 ++ D ++I L + G + L D S + + + Y G + V VDA++ R+ L Sbjct: 1069 NVADDCLWINLSPNVRGRLRLMDASDDLSLLADVEKHYPVGSAMKVHVSAVDADKGRLDL 1128 Query: 432 GVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDA 491 KQ ++ G I+ G+VT V + ++L+ + G + + + D + Sbjct: 1129 SAKQRSDK---LVFEDVSVGMILPGRVTKVTERQVIMQLSKSIVGAVDLIDMADDYTKAN 1185 Query: 492 TLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAF 551 V + + A +D+ N+ ISLS+R + N + F Sbjct: 1186 PTVCQKNEVLRACVIAIDKANKKISLSLRPSKVLSSSLPVQDKEITSIKQLKVNDIVRGF 1245 Score = 178 bits (452), Expect = 5e-43, Method: Composition-based stats. Identities = 88/608 (14%), Positives = 190/608 (31%), Gaps = 72/608 (11%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQV------ 64 E L PG++V G V +I+ + + +P E ++ Sbjct: 156 EGLNFKRIVPGTMVLGQVSSINAHDIGLSLPNNLTGYVPLTSVSKVLEEKIEKILKDDGS 215 Query: 65 --------------------GDEVDVALDAVE--------DGFGETLLSREKAKRHEAWI 96 G + + + LS + + + Sbjct: 216 DEEEDDDEDDSLDLHKYFYLGQYLRAYVVSAGSNAADASAKSRKRIELSVDPRQANSGLS 275 Query: 97 TLEKAYEDAETVTGVINGKVKGGFTVELN----GIRAFLPGSLVDVRPVRDTLHLEGKEL 152 + V + G ++L ++ F+ VD + ++ EG Sbjct: 276 KSD--LVVNSAVQASVVSVEDHGLVMDLGLEGGEVKGFMSSKEVDPKTQPSSIK-EGSVF 332 Query: 153 EFKVIKLDQKRNNVVVSRRA----VIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAF 208 V + + + +S I+ + + + G + ++ +++ G Sbjct: 333 LCMVTGQNANGSVIKLSANLPSAGSIKKSHYLSTAPTITSFLPGTAAEILLTDVSSTGMA 392 Query: 209 VDLGG-VDGLLHITDMAWKRVKH-PSEIVNVGDEITVKVLKF--DRERTRVSLGLK---- 260 + G +D + + K ++ + G +I +++ E +V L Sbjct: 393 GKIMGMLDATVDLVQSGGSSGKDDLTKKYSTGAKIKGRLVCTFPSAEPYKVGFSLLDHVA 452 Query: 261 --QLGEDPWVAIAKRYPEGTKLTGRVTNLTDY-GCFVEIEE-GVEGLVHVSEMDWTNKNI 316 P + +V + G +V+I G VHVS + Sbjct: 453 KFATEGGPGSSDDAPAISAIVPEAKVVKVEPGLGVYVQIGSTKHLGFVHVSRLSDGQVET 512 Query: 317 HPSKV--VNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSI 374 ++ V V E V+ L ++ + E G V+GK++ + Sbjct: 513 ISPELGPFRVDSVHEGRVVGYSAIDNLYLLSFEKKVIDQPFLRVEDVTLGAVVKGKVEKL 572 Query: 375 TDF-----GIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERI 429 G+ + L GI GLV + +++ +G ++ +L V+ E+ +I Sbjct: 573 LIGANGVDGLIVALADGITGLVPSMHFADTPLQF-PEKKFHEGMTVSTRILSVNLEKRQI 631 Query: 430 SLGVKQLAEDPFNNWVALNK---KGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRD 486 L +K+ + + + G G + + GA V+ + G+L SE S Sbjct: 632 RLTLKKSLLNSESAIWKDYEEITPGTQSPGTIIKIQPHGAVVQFYGPIRGFLPVSEMSEA 691 Query: 487 RVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNA 546 ++D + +G V VD +++S + E A E+ + Sbjct: 692 YIKDPSQHFRLGQVVNVHALSVDASREKLAVSCK----DPETFTEAYRKAFENIHPGMLV 747 Query: 547 MAEAFKAA 554 F+ + Sbjct: 748 SGTVFEKS 755 Score = 72.7 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 61/404 (15%), Positives = 129/404 (31%), Gaps = 61/404 (15%) Query: 171 RAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVK 229 + E ++ + + G V G V ++ + + L + G + +T ++ + Sbjct: 145 KDATEKKDVRIEGLNFKRIVPGTMVLGQVSSINAHDIGLSLPNNLTGYVPLTSVSKVLEE 204 Query: 230 HPSEIVN-----------------------VGDEITVKVLK--------FDRERTRVSLG 258 +I+ +G + V+ + R R+ L Sbjct: 205 KIEKILKDDGSDEEEDDDEDDSLDLHKYFYLGQYLRAYVVSAGSNAADASAKSRKRIELS 264 Query: 259 LKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI---EEGVEGLVHVSEMDWTNKN 315 + + + + V ++ D+G +++ V+G + E+ + Sbjct: 265 V-DPRQANSGLSKSDLVVNSAVQASVVSVEDHGLVMDLGLEGGEVKGFMSSKEV---DPK 320 Query: 316 IHPSKVVNVGDVVEVMVLDIDEERRRISL--------GLKQCKANPWQQFAETHNKGDRV 367 PS + G V MV + I L +K+ + G Sbjct: 321 TQPSS-IKEGSVFLCMVTGQNANGSVIKLSANLPSAGSIKKSHYLSTAPTITSFLPGTAA 379 Query: 368 EGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQV--DAE 425 E + ++ G+ + G +D V L + ++ ++Y G +I ++ AE Sbjct: 380 EILLTDVSSTGMAGKIMGMLDATVDLVQSGGSSGKDDLTKKYSTGAKIKGRLVCTFPSAE 439 Query: 426 RERISLGV-----KQLAEDPFNNWVALNKKGAIV-TGKVTAVDAK-GATVELADGVE-GY 477 ++ + K E + AIV KV V+ G V++ G+ Sbjct: 440 PYKVGFSLLDHVAKFATEGGPGSSDDAPAISAIVPEAKVVKVEPGLGVYVQIGSTKHLGF 499 Query: 478 LRASEASRDRVEDATLV---LSVGDEVEAKFTGVDRKNRAISLS 518 + S S +VE + V E + G + LS Sbjct: 500 VHVSRLSDGQVETISPELGPFRVDSVHEGRVVGYSAIDNLYLLS 543 Score = 60.4 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 10/83 (12%), Positives = 26/83 (31%), Gaps = 5/83 (6%) Query: 13 LKEIETRPGSIVRGVVVAIDKDVVLVDAGL--KSESAIPAEQFKNAQGEL---EIQVGDE 67 L + +PG +V G V +++ + + + E + GD Sbjct: 1320 LTLHDLKPGQVVTGKVRKVEEFGAFIVIDGSKNISGLCHRSEMAENRVEDARTLYEEGDA 1379 Query: 68 VDVALDAVEDGFGETLLSREKAK 90 V + ++ + + + Sbjct: 1380 VKAKILKIDRKQEKISFGLKASY 1402 >UniRef50_A9KLR6 Hydroxymethylbutenyl pyrophosphate reductase n=58 Tax=Bacteria RepID=A9KLR6_CLOPH Length = 643 Score = 284 bits (726), Expect = 8e-75, Method: Composition-based stats. Identities = 107/351 (30%), Positives = 196/351 (55%), Gaps = 9/351 (2%) Query: 1 MTE-SFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE 59 M E SF QL EESL + G +V G V+ + +D ++++ G K++ + ++ N Sbjct: 284 MAEMSFEQLLEESL--VTIHNGEVVDGTVIRVKEDEIVLNIGYKADGILTRNEYTNQPNV 341 Query: 60 LEIQV---GDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKV 116 V GD + V + V DG G+ LL+ ++ + LE+A+ + E + + + Sbjct: 342 DLRTVANEGDTMTVKVLKVNDGEGQVLLTYKRLAAEKGSKRLEEAFNNKEVLKAKVAAVL 401 Query: 117 KGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIES 176 GG +V ++ R F+P SL ++ + +E+EF + + + KR ++ R+ ++ + Sbjct: 402 DGGLSVIVDEARIFIPASLASDTYEKNLDKFKDQEIEFVISEFNPKRRRIIGDRKQLLVA 461 Query: 177 ENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVN 236 + L ++ G V+G VKN+TD+GAF+DLGG DGLLHI++M+W R++ P ++ Sbjct: 462 KKQELSKALFAKIKVGDVVEGTVKNVTDFGAFIDLGGADGLLHISEMSWGRIESPKKVFK 521 Query: 237 VGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI 296 VGD + + + +++L LK ++PW +++Y G +TGRV +T++G FVE+ Sbjct: 522 VGDTVKAFIKDI--QGEKIALSLKFPEQNPWANASEKYAVGNVVTGRVARMTEFGAFVEL 579 Query: 297 EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLK 347 E GV+ L+HVS++ + P+ + +G V V+D + + ++ISL +K Sbjct: 580 EPGVDALLHVSQISKEH-IEKPADALKIGQEVTAKVVDFNNDEKKISLSIK 629 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 100/364 (27%), Positives = 165/364 (45%), Gaps = 14/364 (3%) Query: 163 RNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHIT 221 N + + E ++ L + G V G V + + +++G DG+L Sbjct: 274 NNIIKEVHTRMAEMSFEQLLEESLVTIHNGEVVDGTVIRVKEDEIVLNIGYKADGILTRN 333 Query: 222 DMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLG-EDPWVAIAKRYPEGTKL 280 + + + N GD +TVKVLK + +V L K+L E + + + L Sbjct: 334 EYTNQPNVDLRTVANEGDTMTVKVLKVNDGEGQVLLTYKRLAAEKGSKRLEEAFNNKEVL 393 Query: 281 TGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERR 340 +V + D G V I + + S T + +E ++ + + +RR Sbjct: 394 KAKVAAVLDGGLSV-IVDEARIFIPASLASDTYE--KNLDKFKD-QEIEFVISEFNPKRR 449 Query: 341 RISLGLKQC----KANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDI 396 RI KQ K + GD VEG +K++TDFG FI L GG DGL+H+S++ Sbjct: 450 RIIGDRKQLLVAKKQELSKALFAKIKVGDVVEGTVKNVTDFGAFIDL-GGADGLLHISEM 508 Query: 397 SWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTG 456 SW E + +K GD + A + + + E+I+L +K ++P+ N G +VTG Sbjct: 509 SWGRI-ESPKKVFKVGDTVKAFIKDI--QGEKIALSLKFPEQNPWANASEKYAVGNVVTG 565 Query: 457 KVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAIS 516 +V + GA VEL GV+ L S+ S++ +E L +G EV AK + + IS Sbjct: 566 RVARMTEFGAFVELEPGVDALLHVSQISKEHIEKPADALKIGQEVTAKVVDFNNDEKKIS 625 Query: 517 LSVR 520 LS++ Sbjct: 626 LSIK 629 Score = 148 bits (374), Expect = 5e-34, Method: Composition-based stats. Identities = 63/281 (22%), Positives = 115/281 (40%), Gaps = 13/281 (4%) Query: 274 YPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVL 333 G + G V + + + I +G++ +E N+ V N GD + V VL Sbjct: 300 IHNGEVVDGTVIRVKEDEIVLNIGYKADGILTRNEYT-NQPNVDLRTVANEGDTMTVKVL 358 Query: 334 DIDEERRRISLGLKQ-CKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVH 392 +++ ++ L K+ ++ E N + ++ K+ ++ D G+ + + + Sbjct: 359 KVNDGEGQVLLTYKRLAAEKGSKRLEEAFNNKEVLKAKVAAVLDGGLSV-IVDEARIFIP 417 Query: 393 LSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQ----LAEDPFNNWVALN 448 S S E+ + ++K EI V+ + + +R RI KQ ++ A Sbjct: 418 ASLASDTY--EKNLDKFK-DQEIEFVISEFNPKRRRIIGDRKQLLVAKKQELSKALFAKI 474 Query: 449 KKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGV 508 K G +V G V V GA ++L G +G L SE S R+E V VGD V+A + Sbjct: 475 KVGDVVEGTVKNVTDFGAFIDLG-GADGLLHISEMSWGRIESPKKVFKVGDTVKAFIKDI 533 Query: 509 DRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAE 549 + I+LS++ ++ +A M E Sbjct: 534 QGE--KIALSLKFPEQNPWANASEKYAVGNVVTGRVARMTE 572 >UniRef50_Q7UWH7 30S ribosomal protein S1 n=1 Tax=Rhodopirellula baltica RepID=Q7UWH7_RHOBA Length = 560 Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats. Identities = 113/371 (30%), Positives = 191/371 (51%), Gaps = 27/371 (7%) Query: 1 MTESFAQLFEESLKEIETR-----------------PGSIVRGVVVAIDKDVVLVDAGLK 43 ++E E +L E + G+ V V+ I +D V V G Sbjct: 154 LSEDLQAELEATLAEADLDTILGGNAGLPDRREPLGEGARVHAQVIKIHQDNVFVSLGGP 213 Query: 44 SESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGFGETLLSRE-KAKRHEAWITLEKAY 102 E +P EQF E E G ++V + + G S KA W +++ Sbjct: 214 DEGTVPFEQFT----EEEPTPGQSIEVIVRGINSEDGLFSCSLPGKATEVSDWDDIDE-- 267 Query: 103 EDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQK 162 V I G GG ++ +R F+P S + V D +++ V + + + Sbjct: 268 --GSVVEATITGHNNGGLECKVGSVRGFMPISQISEYRVEDCSEFVDQKMVCLVTEANAR 325 Query: 163 RNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITD 222 R N+V+SRRA++E E +R + LE ++ G ++G+V+++ D+GAFVD+GG+DGL+H++ Sbjct: 326 RGNLVLSRRAILEREREVKRQEQLEKIEPGDILEGVVRSVRDFGAFVDVGGLDGLIHVSK 385 Query: 223 MAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTG 282 ++W+R+KHPSE++ G + V+V K D++ ++SL + L E+PW + + G+ G Sbjct: 386 LSWERIKHPSEVIEEGQNVKVRVDKIDKQTGKMSLTYRDLLENPWDSAESMFAVGSVHKG 445 Query: 283 RVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRI 342 VT ++G FV + GVEGL H+SE+ T++ S VVNVGD V+V ++ D + +++ Sbjct: 446 EVTRTAEFGAFVRLTAGVEGLCHISELA-THRVSRVSSVVNVGDEVDVKIMSFDRDSQKV 504 Query: 343 SLGLKQCKANP 353 L +K A P Sbjct: 505 GLSIKAAHAKP 515 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 89/354 (25%), Positives = 154/354 (43%), Gaps = 24/354 (6%) Query: 187 ENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEITVKV 245 E L EG V V + FV LGG +G + E G I V V Sbjct: 186 EPLGEGARVHAQVIKIHQDNVFVSLGGPDEGTVPFEQFT-------EEEPTPGQSIEVIV 238 Query: 246 LKFDRERTRVSLGL--KQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGL 303 + E S L K W I EG+ + +T + G ++ V G Sbjct: 239 RGINSEDGLFSCSLPGKATEVSDWDDID----EGSVVEATITGHNNGGLECKVG-SVRGF 293 Query: 304 VHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAET--- 360 + +S++ + S+ V+ + +V + + R + L + + + Sbjct: 294 MPISQIS-EYRVEDCSEFVD--QKMVCLVTEANARRGNLVLSRRAILEREREVKRQEQLE 350 Query: 361 -HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVV 419 GD +EG ++S+ DFG F+ + GG+DGL+H+S +SW + ++G + V Sbjct: 351 KIEPGDILEGVVRSVRDFGAFVDV-GGLDGLIHVSKLSWERI-KHPSEVIEEGQNVKVRV 408 Query: 420 LQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLR 479 ++D + ++SL + L E+P+++ ++ G++ G+VT GA V L GVEG Sbjct: 409 DKIDKQTGKMSLTYRDLLENPWDSAESMFAVGSVHKGEVTRTAEFGAFVRLTAGVEGLCH 468 Query: 480 ASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIAT 533 SE + RV + V++VGDEV+ K DR ++ + LS++A + Sbjct: 469 ISELATHRVSRVSSVVNVGDEVDVKIMSFDRDSQKVGLSIKAAHAKPAAEGEKQ 522 Score = 160 bits (406), Expect = 9e-38, Method: Composition-based stats. Identities = 56/282 (19%), Positives = 108/282 (38%), Gaps = 19/282 (6%) Query: 272 KRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVM 331 + EG ++ +V + FV + EG V + + G +EV+ Sbjct: 186 EPLGEGARVHAQVIKIHQDNVFVSLGGPDEGTVPFEQFT--------EEEPTPGQSIEVI 237 Query: 332 VLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLV 391 V I+ E S L + ++G VE I + G+ + G + G + Sbjct: 238 VRGINSEDGLFSCSLPGKATE--VSDWDDIDEGSVVEATITGHNNGGLECKV-GSVRGFM 294 Query: 392 HLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVK----QLAEDPFNNWVAL 447 +S IS E+ ++ +V + +A R + L + + E + Sbjct: 295 PISQIS-EYRVEDCSEF--VDQKMVCLVTEANARRGNLVLSRRAILEREREVKRQEQLEK 351 Query: 448 NKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTG 507 + G I+ G V +V GA V++ G++G + S+ S +R++ + V+ G V+ + Sbjct: 352 IEPGDILEGVVRSVRDFGAFVDVG-GLDGLIHVSKLSWERIKHPSEVIEEGQNVKVRVDK 410 Query: 508 VDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAE 549 +D++ +SL+ R E A + AE Sbjct: 411 IDKQTGKMSLTYRDLLENPWDSAESMFAVGSVHKGEVTRTAE 452 Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 64/185 (34%), Gaps = 8/185 (4%) Query: 6 AQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA---QGELEI 62 + + + + PG I+ GVV ++ VD G + I + I Sbjct: 340 EREVKRQEQLEKIEPGDILEGVVRSVRDFGAFVDVGG-LDGLIHVSKLSWERIKHPSEVI 398 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 + G V V +D ++ G+ L + W + E + G + + G V Sbjct: 399 EEGQNVKVRVDKIDKQTGKMSL-TYRDLLENPWDSAESMFAVGSVHKGEVTRTAEFGAFV 457 Query: 123 EL-NGIRAFLPGSLVDVRPVRDTLHLE--GKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 L G+ S + V + G E++ K++ D+ V +S +A + Sbjct: 458 RLTAGVEGLCHISELATHRVSRVSSVVNVGDEVDVKIMSFDRDSQKVGLSIKAAHAKPAA 517 Query: 180 AERDQ 184 Q Sbjct: 518 EGEKQ 522 Score = 55.4 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 46/129 (35%), Gaps = 10/129 (7%) Query: 1 MTESFAQLFEESLKEIE--TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQG 58 M+ ++ L E E GS+ +G V + V E + + Sbjct: 418 MSLTYRDLLENPWDSAESMFAVGSVHKGEVTRTAEFGAFVRLTAGVEGLCHISELATHRV 477 Query: 59 ELEIQV---GDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAET-----VTG 110 V GDEVDV + + + + LS + A A ++ E+ E V Sbjct: 478 SRVSSVVNVGDEVDVKIMSFDRDSQKVGLSIKAAHAKPAAEGEKQVEEEVEPPRELAVKA 537 Query: 111 VINGKVKGG 119 +G +KGG Sbjct: 538 SHSGPLKGG 546 >UniRef50_B8JIP9 Programmed cell death 11 n=5 Tax=Clupeocephala RepID=B8JIP9_DANRE Length = 1816 Score = 283 bits (723), Expect = 2e-74, Method: Composition-based stats. Identities = 98/527 (18%), Positives = 199/527 (37%), Gaps = 27/527 (5%) Query: 10 EESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVD 69 ++ PG ++ G V + ++V + + E G E+ Sbjct: 261 KQGWTLDNLLPGLLIHGCVKRVTPHGLIVTFLSSFTGVVDFLHL-DEDKESTYSKGQEIL 319 Query: 70 VALDAVEDGFGETLLSR--EKAKRHEAWITLEKAYEDAETVTGVINGKV---KGGFTVEL 124 + V+ + LS A + L + E V G + G L Sbjct: 320 ARILYVQPSTRQVGLSLRSHLLPPGGAVLDLHFSERVGEVVQGCQMTSLHHYSGALMKML 379 Query: 125 NGIRAFLPGSLVDVRPVR-DTLHLEGKE-LEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 +G RAF+ +L+ DT HL + ++I + R Sbjct: 380 DGSRAFVHRNLLKEPKEELDTNHLMSQTQHILRIINYSPIEQIYQATLRWSSIE----TP 435 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEI 241 ++++ G V+G V +L +G +V +G + G++ +A +K+P + G ++ Sbjct: 436 FFSCQDIKVGQIVEGTVTDLQKHGVYVRIGEHIRGMIPRIHLADVTLKNPEKKFYPGLKV 495 Query: 242 TVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRY---PEGTKLTGRVTNLTDYGCFVEIEE 298 +VL + ++ + L K+ + + I + Y G G V + ++GC V E Sbjct: 496 KCRVLLVEAQKKLLILTRKKALVESTLPIFQSYSDARPGRISHGFVVCIKEFGCIVRFYE 555 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN---PWQ 355 V+GLV + E+ T +P ++ VG VV+V VL DEE++ + L K Q Sbjct: 556 DVKGLVPMQELT-TETVTNPEELFFVGQVVKVKVLKCDEEKKMLRLSFKSVTEEDVREEQ 614 Query: 356 QFAETHNKGDRVEGKIKSITDFGIFIGL-DGGIDGLVHLSDISWNVAGEEAVR-EYKKGD 413 G V+ ++ G+ + + + + + +S +V + ++GD Sbjct: 615 IAKFDFIVGKMVDARVCRKVLNGLEVSIIPEEVQAFLPTTHLSDHVTNCLPLWMALEEGD 674 Query: 414 EIAAVVLQVDAERERISLGVK-----QLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATV 468 I ++ + +++ I L K + + + + G + G V + G + Sbjct: 675 TICNLMCLTNYKKKGIVLTKKPHLKAYIEDGAIPKNFSELQVGMQMVGWVKNIMPYGVFI 734 Query: 469 ELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAI 515 GV G + +++ + + + V AK T +D + + Sbjct: 735 SFPYGVFGLAPIANMGDQFIKETSGIFDIDQTVVAKVTNLDEEKQRF 781 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 91/553 (16%), Positives = 207/553 (37%), Gaps = 43/553 (7%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE----------- 59 + L + G+++ G V + V+V +P +A Sbjct: 71 QILHLRDLTVGTLMLGCVKEVSDFEVVVGLPSGLVGYLPICNICDAYTNILNDKLDTDDG 130 Query: 60 --------LEIQVGDEVDVALDAVED-GFGETLLSREKAKRHEAWITLEKAYEDAETVTG 110 +G + + +++ G L + A + A T++G Sbjct: 131 LEEVVPLSKLFTLGMLIRCVVSSLDSAKEGHISLKLSINPKDVNKALNSVALKPAMTLSG 190 Query: 111 VINGKVKGGFTVELN--GIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVV 168 + G+ V++ G +AFLP G+ + + + V + Sbjct: 191 CVESVEDHGYLVDIGIGGTKAFLPK----KSTSSKQDLYVGQYVLVLIEDVKDSGRVVRL 246 Query: 169 --SRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVD-LGGVDGLLHITDMAW 225 + +A++++ ++ L+NL G+ + G VK +T +G V L G++ + Sbjct: 247 SQNPQALVKACAQTKQGWTLDNLLPGLLIHGCVKRVTPHGLIVTFLSSFTGVVDFLHLDE 306 Query: 226 KRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAK---RYPEGTKLTG 282 + + G EI ++L +V L L+ P A+ G + G Sbjct: 307 DK----ESTYSKGQEILARILYVQPSTRQVGLSLRSHLLPPGGAVLDLHFSERVGEVVQG 362 Query: 283 R-VTNLTDY-GCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERR 340 +T+L Y G +++ +G VH + + + + + +++ + + +++ + Sbjct: 363 CQMTSLHHYSGALMKMLDGSRAFVHRNLLKEPKEELDTNHLMSQTQHI-LRIINYSPIEQ 421 Query: 341 RISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNV 400 L+ + G VEG + + G+++ + I G++ ++ V Sbjct: 422 IYQATLRWSSIETPFFSCQDIKVGQIVEGTVTDLQKHGVYVRIGEHIRGMIPRIHLAD-V 480 Query: 401 AGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAED---PFNNWVALNKKGAIVTGK 457 + +++ G ++ VL V+A+++ + L K+ + P + + G I G Sbjct: 481 TLKNPEKKFYPGLKVKCRVLLVEAQKKLLILTRKKALVESTLPIFQSYSDARPGRISHGF 540 Query: 458 VTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISL 517 V + G V + V+G + E + + V + + VG V+ K D + + + L Sbjct: 541 VVCIKEFGCIVRFYEDVKGLVPMQELTTETVTNPEELFFVGQVVKVKVLKCDEEKKMLRL 600 Query: 518 SVRAKDEADEKDA 530 S ++ E D ++ Sbjct: 601 SFKSVTEEDVREE 613 Score = 204 bits (518), Expect = 9e-51, Method: Composition-based stats. Identities = 91/537 (16%), Positives = 201/537 (37%), Gaps = 29/537 (5%) Query: 9 FEESLKEIETRPGSIVRGVVVAIDKDVVLVDAG-LKSESAIPAEQFKNAQGELEIQVGDE 67 ++L + +P + G V +++ LVD G +++ +P + + + ++ VG Sbjct: 173 VNKALNSVALKPAMTLSGCVESVEDHGYLVDIGIGGTKAFLPKKSTSS---KQDLYVGQY 229 Query: 68 VDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAE-----TVTGVINGKVKGGFTV 122 V V ++ V+D LS+ +A ++ + + G + G V Sbjct: 230 VLVLIEDVKDSGRVVRLSQNPQALVKACAQTKQGWTLDNLLPGLLIHGCVKRVTPHGLIV 289 Query: 123 EL-NGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 + + +D ++ + +G+E+ +++ + V +S R+ + A Sbjct: 290 TFLSSFTGVVDFLHLDEDK--ESTYSKGQEILARILYVQPSTRQVGLSLRSHLLPPGGAV 347 Query: 182 RDQLLENLQEGMEVKGI-VKNLTDY-GAFVD-LGGVDGLLHITDMAWKRVKHPSEIVNVG 238 D + G V+G + +L Y GA + L G +H + + + + + Sbjct: 348 LDLHFSE-RVGEVVQGCQMTSLHHYSGALMKMLDGSRAFVHRNLLKEPKEELDTNHLMSQ 406 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE 298 + ++++ + L+ + + G + G VT+L +G +V I E Sbjct: 407 TQHILRIINYSPIEQIYQATLRWSSIETPFFSCQDIKVGQIVEGTVTDLQKHGVYVRIGE 466 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN---PWQ 355 + G++ + +P K G V+ VL ++ +++ + L K+ P Sbjct: 467 HIRGMIPRIHLAD-VTLKNPEKKFYPGLKVKCRVLLVEAQKKLLILTRKKALVESTLPIF 525 Query: 356 QFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEI 415 Q G G + I +FG + + GLV + +++ + G + Sbjct: 526 QSYSDARPGRISHGFVVCIKEFGCIVRFYEDVKGLVPMQELTTETVT-NPEELFFVGQVV 584 Query: 416 AAVVLQVDAERERISLGVKQLAEDPFNNWVA---LNKKGAIVTGKVTAVDAKGATVE-LA 471 VL+ D E++ + L K + E+ G +V +V G V + Sbjct: 585 KVKVLKCDEEKKMLRLSFKSVTEEDVREEQIAKFDFIVGKMVDARVCRKVLNGLEVSIIP 644 Query: 472 DGVEGYLRASEASRDRVEDAT--LVLSVGDEV-EAKFTGVDRKNRAISLSVRAKDEA 525 + V+ +L + S + L GD + + K + I L+ + +A Sbjct: 645 EEVQAFLPTTHLSDHVTNCLPLWMALEEGDTICNLMCLT-NYKKKGIVLTKKPHLKA 700 Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats. Identities = 94/580 (16%), Positives = 209/580 (36%), Gaps = 58/580 (10%) Query: 19 RPGSIVRGV-VVAIDKD-VVLVDAGLKSESAIPAEQFKNAQGELEIQ---VGDEVDVALD 73 R G +V+G + ++ L+ S + + K + EL+ + + + Sbjct: 355 RVGEVVQGCQMTSLHHYSGALMKMLDGSRAFVHRNLLKEPKEELDTNHLMSQTQHILRII 414 Query: 74 AVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNG-IRAFLP 132 + + + + + + V G + K G V + IR +P Sbjct: 415 NYSPIEQIYQATLRWSSIETPF-FSCQDIKVGQIVEGTVTDLQKHGVYVRIGEHIRGMIP 473 Query: 133 GSLVDVRPVRDTLH--LEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQ 190 + +++ G +++ +V+ ++ ++ ++++R+ + Q + + Sbjct: 474 RIHLADVTLKNPEKKFYPGLKVKCRVLLVEAQKKLLILTRKKALVESTL-PIFQSYSDAR 532 Query: 191 EGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFD 249 G G V + ++G V V GL+ + ++ + V +P E+ VG + VKVLK D Sbjct: 533 PGRISHGFVVCIKEFGCIVRFYEDVKGLVPMQELTTETVTNPEELFFVGQVVKVKVLKCD 592 Query: 250 RERTRVSLGLKQLGE---DPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI-EEGVEGLVH 305 E+ + L K + E + G + RV G V I E V+ + Sbjct: 593 EEKKMLRLSFKSVTEEDVREEQIAKFDFIVGKMVDARVCRKVLNGLEVSIIPEEVQAFLP 652 Query: 306 VSEMDWTNKNIHPS-KVVNVGDVVEVMVLDIDEERRRISLGLKQC-----KANPWQQFAE 359 + + N P + GD + ++ + +++ I L K + + Sbjct: 653 TTHLSDHVTNCLPLWMALEEGDTICNLMCLTNYKKKGIVLTKKPHLKAYIEDGAIPKNFS 712 Query: 360 THNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVV 419 G ++ G +K+I +G+FI G+ GL ++++ +E + + A V Sbjct: 713 ELQVGMQMVGWVKNIMPYGVFISFPYGVFGLAPIANMGDQFI-KETSGIFDIDQTVVAKV 771 Query: 420 LQVDAERERISL--------------------GVKQLAEDPFNN----------WVALNK 449 +D E++R + G+K+ ++ Sbjct: 772 TNLDEEKQRFLVSLKLSELSLSENEFHTRLIQGLKERRNISEMRAGRGDSDVLWKLSALT 831 Query: 450 KGAIVTGKVTAVDAKGATVELADGVEGY-LRASEASRDRVEDATLVLSVGDEVEAKFTGV 508 G + V G+ + +D + G + AS+ ++ V L+ G ++ A + Sbjct: 832 VGDQMKMIVGDTTEDGSVMLTSDQLSGVTVLASKYHKEGVN-----LTPGCKLNAVILHI 886 Query: 509 DRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMA 548 D + +S+R K ++ F++ A Sbjct: 887 DFVKSQVHVSLRPKLNIKKEKLEKDARFTAKVQFADKDFA 926 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 64/434 (14%), Positives = 141/434 (32%), Gaps = 36/434 (8%) Query: 125 NGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQ 184 +G+ +P S + G + V LD + + + + + Sbjct: 129 DGLEEVVPLSKL---------FTLGMLIRCVVSSLDSAKEGHISL--KLSINPKDVNKAL 177 Query: 185 LLENLQEGMEVKGIVKNLTDYGAFVDLG--GVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 L+ M + G V+++ D+G VD+G G L + K+ + VG + Sbjct: 178 NSVALKPAMTLSGCVESVEDHGYLVDIGIGGTKAFLPKKSTSSKQD------LYVGQYVL 231 Query: 243 VKVLKFDRERTRVSLG------LKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI 296 V + V L +K + G + G V +T +G V Sbjct: 232 VLIEDVKDSGRVVRLSQNPQALVKACAQTKQGWTLDNLLPGLLIHGCVKRVTPHGLIVTF 291 Query: 297 EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP--- 353 G+V +D + G + +L + R++ L L+ P Sbjct: 292 LSSFTGVVDFLHLDEDK-----ESTYSKGQEILARILYVQPSTRQVGLSLRSHLLPPGGA 346 Query: 354 WQQFAETHNKGDRVEG-KIKSITDF-GIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKK 411 + G+ V+G ++ S+ + G + + G VH + + + + Sbjct: 347 VLDLHFSERVGEVVQGCQMTSLHHYSGALMKMLDGSRAFVHRNLLKEPKEELDTNHLMSQ 406 Query: 412 GDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELA 471 I ++ + ++ + + K G IV G VT + G V + Sbjct: 407 TQHI-LRIINYSPIEQIYQATLRWSSIETPFFSCQDIKVGQIVEGTVTDLQKHGVYVRIG 465 Query: 472 DGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAI 531 + + G + + +++ G +V+ + V+ + + + L+ + Sbjct: 466 EHIRGMIPRIHLADVTLKNPEKKFYPGLKVKCRVLLVEAQKKLLILTRKKALVESTLPIF 525 Query: 532 ATVNKQEDANFSNN 545 + + S+ Sbjct: 526 QSYSDARPGRISHG 539 Score = 131 bits (330), Expect = 7e-29, Method: Composition-based stats. Identities = 92/545 (16%), Positives = 193/545 (35%), Gaps = 58/545 (10%) Query: 13 LKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVAL 72 K G ++ +V +D ++ + + K + + + G +++ + Sbjct: 825 WKLSALTVGDQMKMIVGDTTEDGSVMLTSDQLSG-VTVLASKYHKEGVNLTPGCKLNAVI 883 Query: 73 DAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL---NGIRA 129 ++ + S+ ++ E T + K V L + + Sbjct: 884 LHID-----FVKSQVHVSLRPKLNIKKEKLEKDARFTAKVQFADKDFAVVSLATTSDLTF 938 Query: 130 FLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENL 189 F ++ G L+ KV D ++ +S N+ Sbjct: 939 FPTRPHLNSIFDSK-KFSVGSCLDVKVD--DPNCEDLAGFPLISYQSSNAKHEQHKPNEE 995 Query: 190 QEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAW--KRVKHPSEIVNVGDEITVKVL 246 + G +K VK L V+L G G +H++ + P+ ++ VG E+ +V+ Sbjct: 996 RLGELMKVTVKKLKALCVLVNLPSGNTGRVHVSQILEFPDIGSCPTSVLKVGMEMEARVI 1055 Query: 247 KFDRERTRVSLGLK----------------QLGEDPWVAIAKRYPEGTKLTGRVTNLTDY 290 R L + +L V ++Y G + + Sbjct: 1056 GGRAVRAHNFLAISHPDYNISIPELSFLESKLKVSDMVNKLEKYKPGDDIICFPSKYIKK 1115 Query: 291 GCF--VEIEEGVEGLVHVSEMDWT-NKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLK 347 V ++ + G V + M + HP ++ G + V+ +D ++ I L Sbjct: 1116 EQLLEVHVKPDIMGAVPLLAMCNKLGLSKHPQRLFKPGQALSAKVVSVDP-KKPIQFSLS 1174 Query: 348 QCKANPWQQFAETHNKGDRVEGKIKSITDF-GIFIGLDGGIDGLVHLSDISWNVAGEEAV 406 G ++ I G+ + L GL HL+D+S + E+ + Sbjct: 1175 -------LTGTHKLEPGMNTLAMVQKIQPHKGLMLALPYENTGLAHLTDLSDSYT-EKPL 1226 Query: 407 REYKKGDEIAAVVLQVDAERERISLGVKQLA---------EDPFNNWVALNKKGAIVTGK 457 YK+G I V++ + + ++ ++ EDP +A K+G + G Sbjct: 1227 ESYKEGQIIRCHVIE--QKIKEFNVSLRPSRLNKDKHDIVEDPEIQSIADIKEGQSIRGY 1284 Query: 458 VTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLS-VGDE--VEAKFTGVDRKNRA 514 V++V+ +G + L+ + G + A++ + D +++ VG V AK VD +N Sbjct: 1285 VSSVNDQGIFLRLSRTITGRVLFQNATKYYMNDPKVLIKHVGQNALVAAKVLSVDSENLH 1344 Query: 515 ISLSV 519 ++LS+ Sbjct: 1345 VNLSL 1349 Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats. Identities = 85/611 (13%), Positives = 174/611 (28%), Gaps = 105/611 (17%) Query: 14 KEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE---IQVGDEVDV 70 E + G + G V I V + P + + + V Sbjct: 710 NFSELQVGMQMVGWVKNIMPYGVFISFPYGVFGLAPIANMGDQFIKETSGIFDIDQTVVA 769 Query: 71 ALDAVEDGFGETLLSREKAKRHEAWITLE-----------------------------KA 101 + +++ L+S + ++ + A Sbjct: 770 KVTNLDEEKQRFLVSLKLSELSLSENEFHTRLIQGLKERRNISEMRAGRGDSDVLWKLSA 829 Query: 102 YEDAETVTGVINGKVKGGFTV----ELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVI 157 + + ++ + G + +L+G+ G +L ++ Sbjct: 830 LTVGDQMKMIVGDTTEDGSVMLTSDQLSGVTVLASKYH-----KEGVNLTPGCKLNAVIL 884 Query: 158 KLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGL 217 +D ++ V VS R + + E L++ V+ A V L L Sbjct: 885 HIDFVKSQVHVSLRPKLNIKK--------EKLEKDARFTAKVQFADKDFAVVSLATTSDL 936 Query: 218 L------HITDMAWKRVKHPSEIVNVGDEITVKVLKFDRER--TRVSLGLKQLGEDPWVA 269 H+ + S+ +VG + VKV + E + + Sbjct: 937 TFFPTRPHLNSIFD------SKKFSVGSCLDVKVDDPNCEDLAGFPLISYQSSNAKHEQH 990 Query: 270 IAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIH-PSKVVNVGDVV 328 G + V L V + G G VHVS++ P+ V+ VG + Sbjct: 991 KPNEERLGELMKVTVKKLKALCVLVNLPSGNTGRVHVSQILEFPDIGSCPTSVLKVGMEM 1050 Query: 329 EVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFG---------- 378 E V+ R L + N +V + + + Sbjct: 1051 EARVIGGRAVRAHNFLAISHPDYNISIPELSFLESKLKVSDMVNKLEKYKPGDDIICFPS 1110 Query: 379 --------IFIGLDGGIDGLVHLSDISWNV-AGEEAVREYKKGDEIAAVVLQVDAERE-R 428 + + + I G V L + + + R +K G ++A V+ VD ++ + Sbjct: 1111 KYIKKEQLLEVHVKPDIMGAVPLLAMCNKLGLSKHPQRLFKPGQALSAKVVSVDPKKPIQ 1170 Query: 429 ISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDA-KGATVELADGVEGYLRASEASRDR 487 SL + + G V + KG + L G ++ S Sbjct: 1171 FSLSL---------TGTHKLEPGMNTLAMVQKIQPHKGLMLALPYENTGLAHLTDLSDSY 1221 Query: 488 VEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKD---------EADEKDAIATVNKQE 538 E G + +K + ++S+R E E +IA + + + Sbjct: 1222 TEKPLESYKEGQIIRCHVIE--QKIKEFNVSLRPSRLNKDKHDIVEDPEIQSIADIKEGQ 1279 Query: 539 DANFSNNAMAE 549 +++ + Sbjct: 1280 SIRGYVSSVND 1290 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 74/411 (18%), Positives = 140/411 (34%), Gaps = 52/411 (12%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ-----GELEIQVG 65 E K E R G +++ V + VLV+ + + Q ++VG Sbjct: 988 EQHKPNEERLGELMKVTVKKLKALCVLVNLPSGNTGRVHVSQILEFPDIGSCPTSVLKVG 1047 Query: 66 DEVDVALDAVEDGFGETLLSREKAKRHEAWITLE---------------KAYEDAETVTG 110 E++ + L+ + + L + Y+ + + Sbjct: 1048 MEMEARVIGGRAVRAHNFLAISHPDYNISIPELSFLESKLKVSDMVNKLEKYKPGDDIIC 1107 Query: 111 VINGKVKGGFTVELN---GIRAFLPG----SLVDVRPVRDTLHLEGKELEFKVIKLDQKR 163 + +K +E++ I +P + + + L G+ L KV+ +D K+ Sbjct: 1108 FPSKYIKKEQLLEVHVKPDIMGAVPLLAMCNKLGLSKHPQRLFKPGQALSAKVVSVDPKK 1167 Query: 164 NNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTD-YGAFVDLG-GVDGLLHIT 221 + L+ GM +V+ + G + L GL H+T Sbjct: 1168 PI------------QFSLSLTGTHKLEPGMNTLAMVQKIQPHKGLMLALPYENTGLAHLT 1215 Query: 222 DMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLG-------EDPWVAIAKRY 274 D++ + P E G I V++ + VSL +L EDP + Sbjct: 1216 DLSDSYTEKPLESYKEGQIIRCHVIEQKIKEFNVSLRPSRLNKDKHDIVEDPEIQSIADI 1275 Query: 275 PEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVN-VGD--VVEVM 331 EG + G V+++ D G F+ + + G V + + P ++ VG +V Sbjct: 1276 KEGQSIRGYVSSVNDQGIFLRLSRTITGRV-LFQNATKYYMNDPKVLIKHVGQNALVAAK 1334 Query: 332 VLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIG 382 VL +D E ++L L E+ R+ G+ K D + Sbjct: 1335 VLSVDSENLHVNLSLLSKDTGKPDLLPESLELPLRLTGEEKEKHDKKAAVK 1385 >UniRef50_A4IQA6 30S ribosomal protein S1 n=10 Tax=Bacillaceae RepID=A4IQA6_GEOTN Length = 387 Score = 283 bits (723), Expect = 2e-74, Method: Composition-based stats. Identities = 134/369 (36%), Positives = 199/369 (53%), Gaps = 16/369 (4%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDA-GLKSESAIPAEQFKNAQGE 59 MTE ++ IVRG VV ++ VLV+ K IP + N E Sbjct: 1 MTEEMN------VQVNVYGVDDIVRGKVVKLEDKQVLVEVENSKQSGIIPISELSNLHIE 54 Query: 60 LE---IQVGDEVDVALDAV----EDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVI 112 + VGDEV + V + G +LS++ AW LE+ + ET V+ Sbjct: 55 KPSDAVAVGDEVTAKVKKVEEGKDGEEGLLILSKKAVDAERAWEELERKFASGETFETVV 114 Query: 113 NGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRA 172 VKGG ++ G+R F+P SLV+ V D +GK L KV++LD+++N V++S RA Sbjct: 115 KDIVKGGLVADV-GVRGFIPASLVEPHYVEDFSDYKGKTLTVKVVELDREKNRVILSHRA 173 Query: 173 VIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPS 232 V+E E ++ +LL L+ G + G+V+ + D+G FVD+GG DGL+HI+ ++ RV HPS Sbjct: 174 VVEEEQERQQKELLSRLEAGQVLDGVVRRIADFGVFVDVGGFDGLVHISQLSHTRVAHPS 233 Query: 233 EIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGC 292 E+V GD + VKVL D E+ R+SL +K+ PW I+++ +TG V L +G Sbjct: 234 EVVKEGDAVKVKVLAVDPEQGRLSLSIKEALPGPWEGISEKVKPSDVVTGTVKRLASFGA 293 Query: 293 FVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN 352 FVEI GVEGLVHVS++ + P +V+ GD V+ VLD++E RISL ++ Sbjct: 294 FVEIFPGVEGLVHVSQIA-NRRIGSPHEVLKEGDEVKAKVLDVNEAEHRISLSIRALLEE 352 Query: 353 PWQQFAETH 361 AE + Sbjct: 353 ETAAPAEDY 361 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 103/386 (26%), Positives = 172/386 (44%), Gaps = 23/386 (5%) Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLGG--VDGLLHITDMAWKRVKHPSEIVNVGDEITV 243 + V+G V L D V++ G++ I++++ ++ PS+ V VGDE+T Sbjct: 9 VNVYGVDDIVRGKVVKLEDKQVLVEVENSKQSGIIPISELSNLHIEKPSDAVAVGDEVTA 68 Query: 244 KVLKF----DRERTRVSLGLKQLG-EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE 298 KV K D E + L K + E W + +++ G V ++ G ++ Sbjct: 69 KVKKVEEGKDGEEGLLILSKKAVDAERAWEELERKFASGETFETVVKDIVKGGLVADV-- 126 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFA 358 GV G + S + + S G + V V+++D E+ R+ L + ++ Sbjct: 127 GVRGFIPAS-LVEPHYVEDFSDY--KGKTLTVKVVELDREKNRVILSHRAVVEEEQERQQ 183 Query: 359 E----THNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDE 414 + G ++G ++ I DFG+F+ + GG DGLVH+S +S K+GD Sbjct: 184 KELLSRLEAGQVLDGVVRRIADFGVFVDV-GGFDGLVHISQLSHTRVA-HPSEVVKEGDA 241 Query: 415 IAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGV 474 + VL VD E+ R+SL +K+ P+ K +VTG V + + GA VE+ GV Sbjct: 242 VKVKVLAVDPEQGRLSLSIKEALPGPWEGISEKVKPSDVVTGTVKRLASFGAFVEIFPGV 301 Query: 475 EGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATV 534 EG + S+ + R+ VL GDEV+AK V+ ISLS+RA E + Sbjct: 302 EGLVHVSQIANRRIGSPHEVLKEGDEVKAKVLDVNEAEHRISLSIRALLEEETAAPAEDY 361 Query: 535 NKQEDANFS-----NNAMAEAFKAAK 555 ++ + + E K K Sbjct: 362 SQYTKVAETRGFQLGEVIGEQLKKLK 387 Score = 88.9 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 40/177 (22%), Positives = 69/177 (38%), Gaps = 11/177 (6%) Query: 352 NPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDG-GIDGLVHLSDISWNVAGEEAVREYK 410 + D V GK+ + D + + ++ G++ +S++S N+ E+ Sbjct: 3 EEMNVQVNVYGVDDIVRGKVVKLEDKQVLVEVENSKQSGIIPISELS-NLHIEKPSDAVA 61 Query: 411 KGDEIAAVVLQV----DAERERISLGVKQLA-EDPFNNWVALNKKGAIVTGKVTAVDAKG 465 GDE+ A V +V D E + L K + E + G V + G Sbjct: 62 VGDEVTAKVKKVEEGKDGEEGLLILSKKAVDAERAWEELERKFASGETFETVVKDIVKGG 121 Query: 466 ATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAK 522 ++ GV G++ AS VED + G + K +DR+ + LS RA Sbjct: 122 LVADV--GVRGFIPASLVEPHYVEDFSDY--KGKTLTVKVVELDREKNRVILSHRAV 174 Score = 58.4 bits (140), Expect = 7e-07, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 30/98 (30%), Gaps = 3/98 (3%) Query: 15 EIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ---GELEIQVGDEVDVA 71 + +P +V G V + V+ E + Q N + ++ GDEV Sbjct: 272 SEKVKPSDVVTGTVKRLASFGAFVEIFPGVEGLVHVSQIANRRIGSPHEVLKEGDEVKAK 331 Query: 72 LDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVT 109 + V + LS E E + + Sbjct: 332 VLDVNEAEHRISLSIRALLEEETAAPAEDYSQYTKVAE 369 >UniRef50_D2R2F1 RNA binding S1 domain protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R2F1_9PLAN Length = 502 Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats. Identities = 110/356 (30%), Positives = 176/356 (49%), Gaps = 10/356 (2%) Query: 14 KEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALD 73 K S R VV I D V G K++ F +VG +DV ++ Sbjct: 123 KASTVETDSQHRAQVVEIHGDNVFFALGGKNQGVASLRSFAT-----PPEVGSMLDVVVN 177 Query: 74 AVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL-NGIRAFLP 132 + L + + V I GG E+ G+R F+P Sbjct: 178 SFNTEDN---LYEVSVAGGKLVAGNWSDIREGGLVDAKIVAANTGGLECEIAGGVRGFIP 234 Query: 133 GSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEG 192 S + V + L G+ + + + +++R NVV+SRRAV+E E + + +L+ ++ G Sbjct: 235 ASQAGLYRVENLGDLVGQRITCVITEANERRGNVVLSRRAVLEREKESAKKELMASIAIG 294 Query: 193 MEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRER 252 +G+V+ + D+GAFVD+GG+DGL+HI+ M+W R+KHPSEI+ G ++ V++ K D E Sbjct: 295 DMREGVVRKIQDFGAFVDMGGIDGLIHISQMSWDRIKHPSEILTEGQKVRVRIEKIDPET 354 Query: 253 TRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWT 312 ++ L L+ E PW I +++P G+ + G V+ L +G FV++ GVEGL+H+SE+ Sbjct: 355 GKIGLSLRNQQEHPWTGIDQKFPVGSIVKGTVSRLAAFGAFVKLSPGVEGLIHISELAH- 413 Query: 313 NKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVE 368 N+ VV G VEV +L + E +RISL LK P + V+ Sbjct: 414 NRVYAVQNVVKEGQEVEVKILTVSAEDQRISLSLKATLQAPAKSEKTKAEAAPEVD 469 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 86/354 (24%), Positives = 149/354 (42%), Gaps = 18/354 (5%) Query: 193 MEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRER 252 + + V + F LGG + + + + P E VG + V V F+ E Sbjct: 131 SQHRAQVVEIHGDNVFFALGGKNQGV----ASLRSFATPPE---VGSMLDVVVNSFNTED 183 Query: 253 TRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWT 312 + + G EG + ++ G EI GV G + S+ Sbjct: 184 NLYEVSV--AGGKLVAGNWSDIREGGLVDAKIVAANTGGLECEIAGGVRGFIPASQ-AGL 240 Query: 313 NKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHN----KGDRVE 368 + + +V G + ++ + +E R + L + + + GD E Sbjct: 241 YRVENLGDLV--GQRITCVITEANERRGNVVLSRRAVLEREKESAKKELMASIAIGDMRE 298 Query: 369 GKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERER 428 G ++ I DFG F+ GGIDGL+H+S +SW+ + +G ++ + ++D E + Sbjct: 299 GVVRKIQDFGAFVD-MGGIDGLIHISQMSWDRI-KHPSEILTEGQKVRVRIEKIDPETGK 356 Query: 429 ISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRV 488 I L ++ E P+ G+IV G V+ + A GA V+L+ GVEG + SE + +RV Sbjct: 357 IGLSLRNQQEHPWTGIDQKFPVGSIVKGTVSRLAAFGAFVKLSPGVEGLIHISELAHNRV 416 Query: 489 EDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANF 542 V+ G EVE K V +++ ISLS++A +A K + + Sbjct: 417 YAVQNVVKEGQEVEVKILTVSAEDQRISLSLKATLQAPAKSEKTKAEAAPEVDE 470 Score = 158 bits (399), Expect = 7e-37, Method: Composition-based stats. Identities = 51/306 (16%), Positives = 108/306 (35%), Gaps = 20/306 (6%) Query: 247 KFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHV 306 + D +SL + + + A ++ +V + F + +G+ + Sbjct: 101 EIDEALGGLSLN-ELVSDGGLATKASTVETDSQHRAQVVEIHGDNVFFALGGKNQGVASL 159 Query: 307 SEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDR 366 VG +++V+V + E + + K +G Sbjct: 160 RSFATPP---------EVGSMLDVVVNSFNTEDNLYEVSVAGGKLVAGNW--SDIREGGL 208 Query: 367 VEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAER 426 V+ KI + G+ + GG+ G + S + E G I V+ + + R Sbjct: 209 VDAKIVAANTGGLECEIAGGVRGFIPASQ-AGLYRVENLGDL--VGQRITCVITEANERR 265 Query: 427 ERISLGVKQLAEDPFNNWVALNK----KGAIVTGKVTAVDAKGATVELADGVEGYLRASE 482 + L + + E + G + G V + GA V++ G++G + S+ Sbjct: 266 GNVVLSRRAVLEREKESAKKELMASIAIGDMREGVVRKIQDFGAFVDMG-GIDGLIHISQ 324 Query: 483 ASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANF 542 S DR++ + +L+ G +V + +D + I LS+R + E Sbjct: 325 MSWDRIKHPSEILTEGQKVRVRIEKIDPETGKIGLSLRNQQEHPWTGIDQKFPVGSIVKG 384 Query: 543 SNNAMA 548 + + +A Sbjct: 385 TVSRLA 390 Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats. Identities = 32/194 (16%), Positives = 74/194 (38%), Gaps = 8/194 (4%) Query: 6 AQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQGELEI 62 + + G + GVV I VD G + I Q + Sbjct: 279 EKESAKKELMASIAIGDMREGVVRKIQDFGAFVDMGG-IDGLIHISQMSWDRIKHPSEIL 337 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 G +V V ++ ++ G+ LS ++ W +++ + V G ++ G V Sbjct: 338 TEGQKVRVRIEKIDPETGKIGLSLRN-QQEHPWTGIDQKFPVGSIVKGTVSRLAAFGAFV 396 Query: 123 ELN-GIRAFLPGSLVDVRPVRDTLHLE--GKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 +L+ G+ + S + V ++ G+E+E K++ + + + +S +A +++ Sbjct: 397 KLSPGVEGLIHISELAHNRVYAVQNVVKEGQEVEVKILTVSAEDQRISLSLKATLQAPAK 456 Query: 180 AERDQLLENLQEGM 193 +E+ + + Sbjct: 457 SEKTKAEAAPEVDE 470 >UniRef50_A4QP01 Pdcd11 protein n=4 Tax=Clupeocephala RepID=A4QP01_DANRE Length = 932 Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats. Identities = 99/527 (18%), Positives = 200/527 (37%), Gaps = 27/527 (5%) Query: 10 EESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVD 69 ++ PG +V G V + ++V + + E G E+ Sbjct: 258 KQGWTLDNLLPGLLVHGCVKRVTPHGLIVTFLSSFTGVVDFLHL-DEDKESTYSKGQEIL 316 Query: 70 VALDAVEDGFGETLLSR--EKAKRHEAWITLEKAYEDAETVTGVINGKV---KGGFTVEL 124 + V+ + LS A + L + E V G + G L Sbjct: 317 ARILYVQPSTRQVGLSLRSHLLPPGGAVLDLHFSERVGEVVQGCQMTSLHHYSGALMKML 376 Query: 125 NGIRAFLPGSLVDVRPVR-DTLHLEGK-ELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 +G RAF+ +L+ DT HL + + ++I + R Sbjct: 377 DGSRAFVHRNLLKEPKEELDTNHLMSQSQHILRIINYSPIEQIYQATLRWSSIE----TP 432 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEI 241 ++++ G V+G V +L +G +V +G + G++ +A +K+P + G ++ Sbjct: 433 FFSCQDIKVGQIVEGTVIDLQKHGVYVRIGEHIRGMIPRIHLADVTLKNPEKKFYPGLKV 492 Query: 242 TVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRY---PEGTKLTGRVTNLTDYGCFVEIEE 298 +VL + ++ + L K+ + + I + Y G G V + ++GC V E Sbjct: 493 KCRVLSVEAQKKLLILTRKKALVESTLPIFQSYSDARPGRISHGFVVCIKEFGCIVRFYE 552 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN---PWQ 355 V+GLV + E+ T +P ++ VG VV+V VL DEE++ + L K Q Sbjct: 553 DVKGLVPMQELT-TETVTNPEELFFVGQVVKVKVLKCDEEKKMLRLSFKSVTEEDVREEQ 611 Query: 356 QFAETHNKGDRVEGKIKSITDFGIFIGL-DGGIDGLVHLSDISWNVAGEEAVR-EYKKGD 413 G V+ ++ G+ + + + + + +S +V + ++GD Sbjct: 612 IAKFDFIVGKMVDARVCRKVLNGLEVSIIPEEVQAFLPTTHLSDHVTNCLPLWMALEEGD 671 Query: 414 EIAAVVLQVDAERERISLGVK-----QLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATV 468 I ++ + +++ I L K + + + + G + G V + G + Sbjct: 672 TICNLMCLTNYKKKGIVLTKKPHLKAYIEDGAIPKNFSELQVGMQMVGWVKNIMPYGVFI 731 Query: 469 ELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAI 515 GV G + +++ + + + V AK T +D + + Sbjct: 732 SFPYGVFGLAPIANMGDQFIKETSGIFDIDQTVVAKVTNLDEEKQRF 778 Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 92/553 (16%), Positives = 206/553 (37%), Gaps = 43/553 (7%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE----------- 59 + L + G+++ G V + V+V +P +A Sbjct: 68 QILHLRDLTVGTLMLGCVKEVSDFEVVVGLPSGLVGYLPICNICDAYTNILNDKLDTDDG 127 Query: 60 --------LEIQVGDEVDVALDAVED-GFGETLLSREKAKRHEAWITLEKAYEDAETVTG 110 G + + +++ G L + A + A T++G Sbjct: 128 LEEVVPLSKLFTPGMLIRCVVSSLDSAKEGHISLKLSINPKDVNKALNSVALKPAMTLSG 187 Query: 111 VINGKVKGGFTVELN--GIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVV 168 + G+ V++ G +AFLP G+ + + + V + Sbjct: 188 CVESVEDHGYLVDIGIGGSKAFLPK----KSTSSKQDLYVGQYVLVLIEDVKDSGRVVRL 243 Query: 169 --SRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVD-LGGVDGLLHITDMAW 225 + +A++++ ++ L+NL G+ V G VK +T +G V L G++ + Sbjct: 244 SQNPQALVKACAETKQGWTLDNLLPGLLVHGCVKRVTPHGLIVTFLSSFTGVVDFLHLDE 303 Query: 226 KRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAK---RYPEGTKLTG 282 + + G EI ++L +V L L+ P A+ G + G Sbjct: 304 DK----ESTYSKGQEILARILYVQPSTRQVGLSLRSHLLPPGGAVLDLHFSERVGEVVQG 359 Query: 283 R-VTNLTDY-GCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERR 340 +T+L Y G +++ +G VH + + + + + +++ + + +++ + Sbjct: 360 CQMTSLHHYSGALMKMLDGSRAFVHRNLLKEPKEELDTNHLMSQSQHI-LRIINYSPIEQ 418 Query: 341 RISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNV 400 L+ + G VEG + + G+++ + I G++ ++ V Sbjct: 419 IYQATLRWSSIETPFFSCQDIKVGQIVEGTVIDLQKHGVYVRIGEHIRGMIPRIHLAD-V 477 Query: 401 AGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAED---PFNNWVALNKKGAIVTGK 457 + +++ G ++ VL V+A+++ + L K+ + P + + G I G Sbjct: 478 TLKNPEKKFYPGLKVKCRVLSVEAQKKLLILTRKKALVESTLPIFQSYSDARPGRISHGF 537 Query: 458 VTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISL 517 V + G V + V+G + E + + V + + VG V+ K D + + + L Sbjct: 538 VVCIKEFGCIVRFYEDVKGLVPMQELTTETVTNPEELFFVGQVVKVKVLKCDEEKKMLRL 597 Query: 518 SVRAKDEADEKDA 530 S ++ E D ++ Sbjct: 598 SFKSVTEEDVREE 610 Score = 204 bits (519), Expect = 8e-51, Method: Composition-based stats. Identities = 92/537 (17%), Positives = 200/537 (37%), Gaps = 29/537 (5%) Query: 9 FEESLKEIETRPGSIVRGVVVAIDKDVVLVDAG-LKSESAIPAEQFKNAQGELEIQVGDE 67 ++L + +P + G V +++ LVD G S++ +P + + + ++ VG Sbjct: 170 VNKALNSVALKPAMTLSGCVESVEDHGYLVDIGIGGSKAFLPKKSTSS---KQDLYVGQY 226 Query: 68 VDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAE-----TVTGVINGKVKGGFTV 122 V V ++ V+D LS+ +A ++ + V G + G V Sbjct: 227 VLVLIEDVKDSGRVVRLSQNPQALVKACAETKQGWTLDNLLPGLLVHGCVKRVTPHGLIV 286 Query: 123 EL-NGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 + + +D ++ + +G+E+ +++ + V +S R+ + A Sbjct: 287 TFLSSFTGVVDFLHLDEDK--ESTYSKGQEILARILYVQPSTRQVGLSLRSHLLPPGGAV 344 Query: 182 RDQLLENLQEGMEVKGI-VKNLTDY-GAFVD-LGGVDGLLHITDMAWKRVKHPSEIVNVG 238 D + G V+G + +L Y GA + L G +H + + + + + Sbjct: 345 LDLHFSE-RVGEVVQGCQMTSLHHYSGALMKMLDGSRAFVHRNLLKEPKEELDTNHLMSQ 403 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE 298 + ++++ + L+ + + G + G V +L +G +V I E Sbjct: 404 SQHILRIINYSPIEQIYQATLRWSSIETPFFSCQDIKVGQIVEGTVIDLQKHGVYVRIGE 463 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN---PWQ 355 + G++ + +P K G V+ VL ++ +++ + L K+ P Sbjct: 464 HIRGMIPRIHLAD-VTLKNPEKKFYPGLKVKCRVLSVEAQKKLLILTRKKALVESTLPIF 522 Query: 356 QFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEI 415 Q G G + I +FG + + GLV + +++ + G + Sbjct: 523 QSYSDARPGRISHGFVVCIKEFGCIVRFYEDVKGLVPMQELTTETVT-NPEELFFVGQVV 581 Query: 416 AAVVLQVDAERERISLGVKQLAEDPFNNWVA---LNKKGAIVTGKVTAVDAKGATVE-LA 471 VL+ D E++ + L K + E+ G +V +V G V + Sbjct: 582 KVKVLKCDEEKKMLRLSFKSVTEEDVREEQIAKFDFIVGKMVDARVCRKVLNGLEVSIIP 641 Query: 472 DGVEGYLRASEASRDRVEDAT--LVLSVGDEV-EAKFTGVDRKNRAISLSVRAKDEA 525 + V+ +L + S + L GD + + K + I L+ + +A Sbjct: 642 EEVQAFLPTTHLSDHVTNCLPLWMALEEGDTICNLMCLT-NYKKKGIVLTKKPHLKA 697 Score = 180 bits (458), Expect = 9e-44, Method: Composition-based stats. Identities = 92/579 (15%), Positives = 208/579 (35%), Gaps = 58/579 (10%) Query: 19 RPGSIVRGV-VVAIDKD-VVLVDAGLKSESAIPAEQFKNAQGELEIQ---VGDEVDVALD 73 R G +V+G + ++ L+ S + + K + EL+ + + + Sbjct: 352 RVGEVVQGCQMTSLHHYSGALMKMLDGSRAFVHRNLLKEPKEELDTNHLMSQSQHILRII 411 Query: 74 AVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNG-IRAFLP 132 + + + + + + V G + K G V + IR +P Sbjct: 412 NYSPIEQIYQATLRWSSIETPF-FSCQDIKVGQIVEGTVIDLQKHGVYVRIGEHIRGMIP 470 Query: 133 GSLVDVRPVRDTLH--LEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQ 190 + +++ G +++ +V+ ++ ++ ++++R+ + Q + + Sbjct: 471 RIHLADVTLKNPEKKFYPGLKVKCRVLSVEAQKKLLILTRKKALVESTL-PIFQSYSDAR 529 Query: 191 EGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFD 249 G G V + ++G V V GL+ + ++ + V +P E+ VG + VKVLK D Sbjct: 530 PGRISHGFVVCIKEFGCIVRFYEDVKGLVPMQELTTETVTNPEELFFVGQVVKVKVLKCD 589 Query: 250 RERTRVSLGLKQLGE---DPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI-EEGVEGLVH 305 E+ + L K + E + G + RV G V I E V+ + Sbjct: 590 EEKKMLRLSFKSVTEEDVREEQIAKFDFIVGKMVDARVCRKVLNGLEVSIIPEEVQAFLP 649 Query: 306 VSEMDWTNKNIHPS-KVVNVGDVVEVMVLDIDEERRRISLGLKQC-----KANPWQQFAE 359 + + N P + GD + ++ + +++ I L K + + Sbjct: 650 TTHLSDHVTNCLPLWMALEEGDTICNLMCLTNYKKKGIVLTKKPHLKAYIEDGAIPKNFS 709 Query: 360 THNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVV 419 G ++ G +K+I +G+FI G+ GL ++++ +E + + A V Sbjct: 710 ELQVGMQMVGWVKNIMPYGVFISFPYGVFGLAPIANMGDQFI-KETSGIFDIDQTVVAKV 768 Query: 420 LQVDAERERISL--------------------GVKQLAEDPFNN----------WVALNK 449 +D E++R + G+K+ ++ Sbjct: 769 TNLDEEKQRFLVSLKLSELSLSENEFHTRLIQGLKERRNISEMRAGRGDSDVLWKLSALT 828 Query: 450 KGAIVTGKVTAVDAKGATVELADGVEGY-LRASEASRDRVEDATLVLSVGDEVEAKFTGV 508 G + V G+ + +D + G + AS+ ++ V L+ G ++ A + Sbjct: 829 VGDQMKMIVGDTTEDGSVMLTSDQLSGVTVLASKYHKEGVN-----LTPGCKLNAVILHI 883 Query: 509 DRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAM 547 D + +S+R K ++ ++ + Sbjct: 884 DFVKSQVHVSLRPKLNIKKEKLEKDARFTAKSSLPTKTL 922 Score = 152 bits (385), Expect = 3e-35, Method: Composition-based stats. Identities = 64/434 (14%), Positives = 140/434 (32%), Gaps = 36/434 (8%) Query: 125 NGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQ 184 +G+ +P S + G + V LD + + + + + Sbjct: 126 DGLEEVVPLSKL---------FTPGMLIRCVVSSLDSAKEGHISL--KLSINPKDVNKAL 174 Query: 185 LLENLQEGMEVKGIVKNLTDYGAFVDLG--GVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 L+ M + G V+++ D+G VD+G G L + K+ + VG + Sbjct: 175 NSVALKPAMTLSGCVESVEDHGYLVDIGIGGSKAFLPKKSTSSKQD------LYVGQYVL 228 Query: 243 VKVLKFDRERTRVSLG------LKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI 296 V + V L +K E G + G V +T +G V Sbjct: 229 VLIEDVKDSGRVVRLSQNPQALVKACAETKQGWTLDNLLPGLLVHGCVKRVTPHGLIVTF 288 Query: 297 EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP--- 353 G+V +D + G + +L + R++ L L+ P Sbjct: 289 LSSFTGVVDFLHLDEDK-----ESTYSKGQEILARILYVQPSTRQVGLSLRSHLLPPGGA 343 Query: 354 WQQFAETHNKGDRVEG-KIKSITDF-GIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKK 411 + G+ V+G ++ S+ + G + + G VH + + + + Sbjct: 344 VLDLHFSERVGEVVQGCQMTSLHHYSGALMKMLDGSRAFVHRNLLKEPKEELDTNHLMSQ 403 Query: 412 GDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELA 471 I ++ + ++ + + K G IV G V + G V + Sbjct: 404 SQHI-LRIINYSPIEQIYQATLRWSSIETPFFSCQDIKVGQIVEGTVIDLQKHGVYVRIG 462 Query: 472 DGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAI 531 + + G + + +++ G +V+ + V+ + + + L+ + Sbjct: 463 EHIRGMIPRIHLADVTLKNPEKKFYPGLKVKCRVLSVEAQKKLLILTRKKALVESTLPIF 522 Query: 532 ATVNKQEDANFSNN 545 + + S+ Sbjct: 523 QSYSDARPGRISHG 536 >UniRef50_C9SZ75 rRNA biogenesis protein RRP5 n=5 Tax=Sordariomycetes RepID=C9SZ75_VERA1 Length = 1789 Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats. Identities = 108/567 (19%), Positives = 211/567 (37%), Gaps = 57/567 (10%) Query: 14 KEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE---IQVGDEVDV 70 + + G+ V G + +I VLV G + + E E ++ + V Sbjct: 813 TYADAKVGAEVPGFISSIRPGAVLVRFGGNLVGVMFKTRLPVEDQEKEGFGLRKDQSITV 872 Query: 71 ALDAVEDGFGETLL--------------SREKAKRHEAWITLEKAYEDAETVTGVINGKV 116 + A++ ++ +EK + + V I G Sbjct: 873 RIRAIDLERTRLVVDPLTAELPSNEVKPKKEKESARPQAHGPVQDITFGQIVEAKIVGIH 932 Query: 117 KGGFTVE-LNGIRAFLPGSLV--DVRPVRDTLHL-----EGKELEFKVIKLD--QKRNNV 166 VE + ++ + S + ++D +G + + I L + + Sbjct: 933 DTQLNVETADKVQGRVDISQIFDSWDKIKDPEEPLSQFKKGDTVRVRAIGLHDSKDHRFL 992 Query: 167 VVSRR----------AVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVD 215 S R + E + LE+L+ G V N + G + ++ V Sbjct: 993 AFSHRSYNSVLEFTAKASDIEADVLKPLSLEDLEVGSTHVAFVNNASRNGLWANISPVVR 1052 Query: 216 GLLHITDMAWK--RVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKR 273 G ++ D++ ++ +G + V+V+ D +R + L + + Sbjct: 1053 GRINAMDVSDDTSKINDVINNFPIGTALKVRVIAVDAKRGVLDLSAR--SDSSAAVTWDS 1110 Query: 274 YPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVL 333 L G V + + V++ V G VH+ +M +++ K + GD ++V V+ Sbjct: 1111 IKPNQVLAGCVVKVNERQIMVKLGSNVAGHVHLVDMSDDFGDVNTLKY-DEGDAIQVSVV 1169 Query: 334 DIDEERRRISLGLKQCKA--------NPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDG 385 ++D+ +R+ L + + + + G V G +K + D G+F+ L G Sbjct: 1170 EVDKSNKRVRLSTRPSRVLNSSSPITDSEITSVKQVVSGSTVRGFVKHVADKGVFVLLGG 1229 Query: 386 GIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWV 445 + LV +S++S +E ++ + VL VD ++ L +K D + Sbjct: 1230 SVSALVKISNLSD-RFLKEWKEHFQVDQLVKGRVLSVDEGAGQVELSLKSSVVDDNYKPL 1288 Query: 446 ALNK---KGAIVTGKVTAVDAKGATVELA--DGVEGYLRASEASRDRVEDATLVLSVGDE 500 K IVTGK+ V+ GA + + D V G SE + VEDA + GD Sbjct: 1289 KTYKDIKPNQIVTGKIRKVEDFGAFIVVDGSDNVSGLCHRSEMADSPVEDARKLYQAGDV 1348 Query: 501 VEAKFTGVDRKNRAISLSVRAKDEADE 527 V+AK +DR + IS ++ ++ Sbjct: 1349 VKAKVLTLDRNKKRISFGLKPAYFDED 1375 Score = 227 bits (579), Expect = 9e-58, Method: Composition-based stats. Identities = 100/598 (16%), Positives = 210/598 (35%), Gaps = 60/598 (10%) Query: 9 FEESLKEIETRPGSIVRGVVVAIDKDVVLVDA-GLKSESAIPAEQFKNAQGELE------ 61 ++ GSIV G V+ D V V+ G ++ +P Q + Sbjct: 712 LDKQAALKALSVGSIVSGKVIQKSDDDVHVELDGSNLKAILPLGQLTDKSANKSQSALKR 771 Query: 62 IQVGDEV-DVALDAVEDGFGETLLS-REKAKRHEAWITLEKAYEDAET---VTGVINGKV 116 I +G + D+ + + LS + L + Y DA+ V G I+ Sbjct: 772 IHMGQTLTDLLVLDKNERRRAITLSSKPSLVEAGKTDKLIRTYADAKVGAEVPGFISSIR 831 Query: 117 KGGFTVELNG-IRAFLPGSLVDVRPVRD--TLHLEGKELEFKVIKLDQKRNNVVVSRRAV 173 G V G + + + + V + + + ++ +D +R +VV Sbjct: 832 PGAVLVRFGGNLVGVMFKTRLPVEDQEKEGFGLRKDQSITVRIRAIDLERTRLVVDPLTA 891 Query: 174 I-----------ESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVD-LGGVDGLLHIT 221 + + ++++ G V+ + + D V+ V G + I+ Sbjct: 892 ELPSNEVKPKKEKESARPQAHGPVQDITFGQIVEAKIVGIHDTQLNVETADKVQGRVDIS 951 Query: 222 DM--AWKRVKHPSE---IVNVGDEITVKVLKF-DRERTR-VSLGLKQLG----------- 263 + +W ++K P E GD + V+ + D + R ++ + Sbjct: 952 QIFDSWDKIKDPEEPLSQFKKGDTVRVRAIGLHDSKDHRFLAFSHRSYNSVLEFTAKASD 1011 Query: 264 ---EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWT-NKNIHPS 319 + + G+ V N + G + I V G ++ ++ +K Sbjct: 1012 IEADVLKPLSLEDLEVGSTHVAFVNNASRNGLWANISPVVRGRINAMDVSDDTSKINDVI 1071 Query: 320 KVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGI 379 +G ++V V+ +D +R + L + + ++ + G + + + I Sbjct: 1072 NNFPIGTALKVRVIAVDAKRGVLDLSARS--DSSAAVTWDSIKPNQVLAGCVVKVNERQI 1129 Query: 380 FIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAED 439 + L + G VHL D+S + ++ Y +GD I V++VD +R+ L + Sbjct: 1130 MVKLGSNVAGHVHLVDMSDDFGDVNTLK-YDEGDAIQVSVVEVDKSNKRVRLSTRPSRVL 1188 Query: 440 PFNNWVALNKK--------GAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDA 491 ++ + ++ G+ V G V V KG V L V ++ S S +++ Sbjct: 1189 NSSSPITDSEITSVKQVVSGSTVRGFVKHVADKGVFVLLGGSVSALVKISNLSDRFLKEW 1248 Query: 492 TLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAE 549 V V+ + VD + LS+++ D + T + + + Sbjct: 1249 KEHFQVDQLVKGRVLSVDEGAGQVELSLKSSVVDDNYKPLKTYKDIKPNQIVTGKIRK 1306 Score = 201 bits (511), Expect = 7e-50, Method: Composition-based stats. Identities = 98/574 (17%), Positives = 181/574 (31%), Gaps = 67/574 (11%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA-------------- 56 E+L GS+V G V AI + + + N Sbjct: 137 EALNYKRLAKGSVVLGQVSAISHHNITIALPNNLSGNVSIAAISNVVTAKIQQAAEASDD 196 Query: 57 -------------QGELEIQVGDEVDVALDAVEDGFG---ETLLSREKAKRHEAWITLEK 100 + +VG V + + ++G G + + + Sbjct: 197 DDSADENDDDDDIELNSLFEVGQYVRAYVLSTKEGEGSGKKNHIELSLRPEDANSGMSKN 256 Query: 101 AYEDAETVTGVINGKVKGGFTVELN----GIRAFLPGSLVDVRPVRDTLHLEGKELEFKV 156 TV + G+ +EL ++ FLP V V + G V Sbjct: 257 DVVANATVMAAVTSVQDHGYEMELGVDNKKLKGFLPKKDVGSE-VDELRLQPGAVSLCLV 315 Query: 157 IKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG--- 213 + K + + + +++N A + Q G V +V + T G + G Sbjct: 316 KSVSGKIAQLCLDSEKLGKADNIATEATTVNTFQPGTVVDVLVTSTTGRGLLGKILGHLP 375 Query: 214 -VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAK 272 L+H A VG + +V+ LG+ L + K Sbjct: 376 VTADLIHSG--AGPDAVDLDAKYKVGSRVKARVICTFPNAKNPKLGISLLPHIIKLQAKK 433 Query: 273 RYPEGT-------------KLTGRVTNLTD-YGCFVEIE-EGVEGLVHVSEMDWTNKNI- 316 G V + G +V++ G+ G VH+S++ Sbjct: 434 AGKGGQAKPPLNVLPIAVRVDKCIVRKVEPEIGLYVDVGVAGLSGFVHISKVKDGKVEAL 493 Query: 317 -HPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSIT 375 S G V V+ + + E G+ V I+ + Sbjct: 494 YESSGPFKEGSVHRGRVIGYSAFDGMYLMTFEPTIIEQQFIRLEDVPAGEIVSCTIEKVV 553 Query: 376 DFGIFI-----GLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERIS 430 G + + GI G VH + + V + +++++G + A VL V + ++ Sbjct: 554 VGGQGVSGLVVKVAEGITGYVHETHFAD-VRLQHPEKKFREGMTVKARVLSVRPRKRQMR 612 Query: 431 LGVKQ---LAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDR 487 L +K+ ++ P + G G ++ + GA +E GV G+L S+ S Sbjct: 613 LTLKKTLVNSDTPIIKSFDEVEVGQQALGTISDISPHGARIEFYKGVRGWLPVSQMSEAF 672 Query: 488 VEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRA 521 ++D VG V VD +N+ + +S + Sbjct: 673 IQDPKEHFKVGQVVNVHILEVDPENQKLLVSCKD 706 Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats. Identities = 100/590 (16%), Positives = 207/590 (35%), Gaps = 52/590 (8%) Query: 14 KEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA---QGELEIQVGDEVDV 70 E G G + I ++ +P Q A + +VG V+V Sbjct: 629 SFDEVEVGQQALGTISDISPHGARIEFYKGVRGWLPVSQMSEAFIQDPKEHFKVGQVVNV 688 Query: 71 ALDAVEDGFGETLL-SREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNG--I 127 + V+ + L+ ++ + KA V+G + K VEL+G + Sbjct: 689 HILEVDPENQKLLVSCKDPSAFGLDKQAALKALSVGSIVSGKVIQKSDDDVHVELDGSNL 748 Query: 128 RAFLPGSLVDVRPVRDTLH-----LEGKEL-EFKVIKLDQKRNNVVVSRRAVIESE-NSA 180 +A LP + + + G+ L + V+ +++R + +S + + + Sbjct: 749 KAILPLGQLTDKSANKSQSALKRIHMGQTLTDLLVLDKNERRRAITLSSKPSLVEAGKTD 808 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGD 239 + + + + G EV G + ++ V GG + G++ T + + + + Sbjct: 809 KLIRTYADAKVGAEVPGFISSIRPGAVLVRFGGNLVGVMFKTRLPVEDQEKEGFGLRKDQ 868 Query: 240 EITVKVLKFDRERTRVSLGL---------------KQLGEDPWVAIAKRYPEGTKLTGRV 284 ITV++ D ERTR+ + K+ + G + ++ Sbjct: 869 SITVRIRAIDLERTRLVVDPLTAELPSNEVKPKKEKESARPQAHGPVQDITFGQIVEAKI 928 Query: 285 TNLTDYGCFVEIEEGVEGLVHVSEMDWTN-KNIHPSK---VVNVGDVVEVMVLDIDEERR 340 + D VE + V+G V +S++ + K P + GD V V + + + + Sbjct: 929 VGIHDTQLNVETADKVQGRVDISQIFDSWDKIKDPEEPLSQFKKGDTVRVRAIGLHDSKD 988 Query: 341 RISLGLKQCKANPWQQFA----------------ETHNKGDRVEGKIKSITDFGIFIGLD 384 L N +F E G + + + G++ + Sbjct: 989 HRFLAFSHRSYNSVLEFTAKASDIEADVLKPLSLEDLEVGSTHVAFVNNASRNGLWANIS 1048 Query: 385 GGIDGLVHLSDISWN-VAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNN 443 + G ++ D+S + + + + G + V+ VDA+R + L + ++ Sbjct: 1049 PVVRGRINAMDVSDDTSKINDVINNFPIGTALKVRVIAVDAKRGVLDLSAR--SDSSAAV 1106 Query: 444 WVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEA 503 K ++ G V V+ + V+L V G++ + S D + TL GD ++ Sbjct: 1107 TWDSIKPNQVLAGCVVKVNERQIMVKLGSNVAGHVHLVDMSDDFGDVNTLKYDEGDAIQV 1166 Query: 504 KFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKA 553 VD+ N+ + LS R + I + + F Sbjct: 1167 SVVEVDKSNKRVRLSTRPSRVLNSSSPITDSEITSVKQVVSGSTVRGFVK 1216 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 59/433 (13%), Positives = 146/433 (33%), Gaps = 33/433 (7%) Query: 148 EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGA 207 G+ + V+ + + + + A ++ V V ++ D+G Sbjct: 217 VGQYVRAYVLSTKEGEGSGKKNHIELSLRPEDANSGMSKNDVVANATVMAAVTSVQDHGY 276 Query: 208 FVDLG----GVDGLLHI----TDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGL 259 ++LG + G L +++ R++ + + + ++ K+ + + ++ Sbjct: 277 EMELGVDNKKLKGFLPKKDVGSEVDELRLQPGAVSLCLVKSVSGKIAQLCLDSEKLG--- 333 Query: 260 KQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPS 319 K + GT + VT+ T G +I + + + Sbjct: 334 KADNIATEATTVNTFQPGTVVDVLVTSTTGRGLLGKILGHLPVTADLIHSGAGPDAVDLD 393 Query: 320 KVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGD-------------R 366 VG V+ V+ + LG+ Q + G Sbjct: 394 AKYKVGSRVKARVICTFPNAKNPKLGISLLPHIIKLQAKKAGKGGQAKPPLNVLPIAVRV 453 Query: 367 VEGKIKSITDF-GIFIGLDG-GIDGLVHLSDISWNVAGE--EAVREYKKGDEIAAVVLQV 422 + ++ + G+++ + G+ G VH+S + E+ +K+G V+ Sbjct: 454 DKCIVRKVEPEIGLYVDVGVAGLSGFVHISKVKDGKVEALYESSGPFKEGSVHRGRVIGY 513 Query: 423 DAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATV-----ELADGVEGY 477 A + + + + G IV+ + V G V ++A+G+ GY Sbjct: 514 SAFDGMYLMTFEPTIIEQQFIRLEDVPAGEIVSCTIEKVVVGGQGVSGLVVKVAEGITGY 573 Query: 478 LRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQ 537 + + + R++ G V+A+ V + R + L+++ + I + ++ Sbjct: 574 VHETHFADVRLQHPEKKFREGMTVKARVLSVRPRKRQMRLTLKKTLVNSDTPIIKSFDEV 633 Query: 538 EDANFSNNAMAEA 550 E + +++ Sbjct: 634 EVGQQALGTISDI 646 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 56/392 (14%), Positives = 121/392 (30%), Gaps = 60/392 (15%) Query: 171 RAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVK 229 ++ + + + + L +G V G V ++ + + L + G + I ++ Sbjct: 126 KSSSDEDGTKIEALNYKRLAKGSVVLGQVSAISHHNITIALPNNLSGNVSIAAISNVVTA 185 Query: 230 HP------------------------SEIVNVGDEITVKVLKFDR-----ERTRVSLGLK 260 + + VG + VL ++ + L L+ Sbjct: 186 KIQQAAEASDDDDSADENDDDDDIELNSLFEVGQYVRAYVLSTKEGEGSGKKNHIELSLR 245 Query: 261 QLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE---EGVEGLVHVSEMDWTNKNIH 317 + + VT++ D+G +E+ + ++G + ++ + Sbjct: 246 P-EDANSGMSKNDVVANATVMAAVTSVQDHGYEMELGVDNKKLKGFLPKKDVGSEVDELR 304 Query: 318 PSKVVNVGDVVEVMVLDIDEERRRISL-GLKQCKAN---PWQQFAETHNKGDRVEGKIKS 373 + G V +V + + ++ L K KA+ T G V+ + S Sbjct: 305 ----LQPGAVSLCLVKSVSGKIAQLCLDSEKLGKADNIATEATTVNTFQPGTVVDVLVTS 360 Query: 374 ITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGV 433 T G+ + G + L + +YK G + A V+ + LG+ Sbjct: 361 TTGRGLLGKILGHLPVTADLIHSGAGPDAVDLDAKYKVGSRVKARVICTFPNAKNPKLGI 420 Query: 434 KQLAEDPFNNWVALNKKGA-------------IVTGKVTAVDAK-GATVELAD-GVEGYL 478 L K G + V V+ + G V++ G+ G++ Sbjct: 421 SLLPHIIKLQAKKAGKGGQAKPPLNVLPIAVRVDKCIVRKVEPEIGLYVDVGVAGLSGFV 480 Query: 479 RASEASRDRVEDATLV---LSVGDEVEAKFTG 507 S+ +VE G + G Sbjct: 481 HISKVKDGKVEALYESSGPFKEGSVHRGRVIG 512 Score = 58.8 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 13/89 (14%), Positives = 25/89 (28%), Gaps = 5/89 (5%) Query: 14 KEIETRPGSIVRGVVVAIDKDVVL--VDAGLKSESAIPAEQFKNAQGEL---EIQVGDEV 68 + +P IV G + ++ VD + ++ E Q GD V Sbjct: 1290 TYKDIKPNQIVTGKIRKVEDFGAFIVVDGSDNVSGLCHRSEMADSPVEDARKLYQAGDVV 1349 Query: 69 DVALDAVEDGFGETLLSREKAKRHEAWIT 97 + ++ + A E Sbjct: 1350 KAKVLTLDRNKKRISFGLKPAYFDEDVDM 1378 >UniRef50_A9B766 RNA binding S1 domain protein n=6 Tax=Chloroflexi (class) RepID=A9B766_HERA2 Length = 397 Score = 282 bits (721), Expect = 3e-74, Method: Composition-based stats. Identities = 122/358 (34%), Positives = 194/358 (54%), Gaps = 14/358 (3%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE- 61 + + L E G + G+V+ ++ +LVD G K E IP + + EL Sbjct: 12 QDWTTLLAEY-DYQRPERGQLREGIVMRVEDSQILVDIGAKHEGVIPNQDLRRLPPELVS 70 Query: 62 -IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 I+ GD + V + E GE +LS + W + E+ + + + G KGG Sbjct: 71 GIKNGDTLQVYVMEPESKEGELVLSLNMVQVERDWQEAQTMLENGQIIEAGVVGYNKGGL 130 Query: 121 TVELNGIRAFLPGSLVDVRPVR--------DTLHLEGKELEFKVIKLDQKRNNVVVSRRA 172 V++ +R F+P S V R + G+ + KVI++D+ RN +V+S RA Sbjct: 131 LVQVGRVRGFVPASQVVNLHSRTGTEGQQSAMTKMVGQNIPLKVIEVDRDRNRLVLSERA 190 Query: 173 VIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPS 232 ++ +++++LLE L+ G V G V LT +GAF+DLGG DGL HI++++W+RV HP Sbjct: 191 AMQRWRQSQKERLLETLEPGAVVTGRVNQLTPFGAFIDLGGADGLAHISELSWQRVNHPR 250 Query: 233 EIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGC 292 E++ G E+ V VL+ DR+R R+ L L++L DPW I +RY G + G VTN+ +G Sbjct: 251 EVLQPGQEVQVYVLEVDRDRERIGLSLRRLQPDPWATIDQRYDLGQLIVGEVTNIAPFGV 310 Query: 293 FVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCK 350 FV +EEGVEGL+H SE+ +N + G V+V V+ +D +R+R+ L L++ Sbjct: 311 FVRVEEGVEGLIHASELT---ENGQSPDSLQQGQQVQVKVISLDRQRQRLGLSLRRVD 365 Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats. Identities = 90/363 (24%), Positives = 164/363 (45%), Gaps = 17/363 (4%) Query: 172 AVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKH 230 ++ + + + + G +GIV + D VD+G +G++ D+ + Sbjct: 9 DAVQDWTTLLAEYDYQRPERGQLREGIVMRVEDSQILVDIGAKHEGVIPNQDL-RRLPPE 67 Query: 231 PSEIVNVGDEITVKVLKFDRERTRVSLGLKQLG-EDPWVAIAKRYPEGTKLTGRVTNLTD 289 + GD + V V++ + + + L L + E W G + V Sbjct: 68 LVSGIKNGDTLQVYVMEPESKEGELVLSLNMVQVERDWQEAQTMLENGQIIEAGVVGYNK 127 Query: 290 YGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVN-----VGDVVEVMVLDIDEERRRISL 344 G V++ V G V S++ + + VG + + V+++D +R R+ L Sbjct: 128 GGLLVQVGR-VRGFVPASQVVNLHSRTGTEGQQSAMTKMVGQNIPLKVIEVDRDRNRLVL 186 Query: 345 G----LKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNV 400 +++ + + ++ ET G V G++ +T FG FI L GG DGL H+S++SW Sbjct: 187 SERAAMQRWRQSQKERLLETLEPGAVVTGRVNQLTPFGAFIDL-GGADGLAHISELSWQR 245 Query: 401 AGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTA 460 + G E+ VL+VD +RERI L +++L DP+ G ++ G+VT Sbjct: 246 VN-HPREVLQPGQEVQVYVLEVDRDRERIGLSLRRLQPDPWATIDQRYDLGQLIVGEVTN 304 Query: 461 VDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 + G V + +GVEG + ASE + + + L G +V+ K +DR+ + + LS+R Sbjct: 305 IAPFGVFVRVEEGVEGLIHASELTENG--QSPDSLQQGQQVQVKVISLDRQRQRLGLSLR 362 Query: 521 AKD 523 D Sbjct: 363 RVD 365 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 62/287 (21%), Positives = 106/287 (36%), Gaps = 14/287 (4%) Query: 272 KRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVM 331 +R G G V + D V+I EG++ ++ + GD ++V Sbjct: 24 QRPERGQLREGIVMRVEDSQILVDIGAKHEGVIPNQDL--RRLPPELVSGIKNGDTLQVY 81 Query: 332 VLDIDEERRRISLGLKQCK-ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGL 390 V++ + + + L L + WQ+ G +E + G+ + + + G Sbjct: 82 VMEPESKEGELVLSLNMVQVERDWQEAQTMLENGQIIEAGVVGYNKGGLLVQVGR-VRGF 140 Query: 391 VHLSDI----SWNVAGEEAVREYK-KGDEIAAVVLQVDAERERISLGVKQLAED----PF 441 V S + S + K G I V++VD +R R+ L + + Sbjct: 141 VPASQVVNLHSRTGTEGQQSAMTKMVGQNIPLKVIEVDRDRNRLVLSERAAMQRWRQSQK 200 Query: 442 NNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEV 501 + + GA+VTG+V + GA ++L G +G SE S RV VL G EV Sbjct: 201 ERLLETLEPGAVVTGRVNQLTPFGAFIDLG-GADGLAHISELSWQRVNHPREVLQPGQEV 259 Query: 502 EAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMA 548 + VDR I LS+R + + +A Sbjct: 260 QVYVLEVDRDRERIGLSLRRLQPDPWATIDQRYDLGQLIVGEVTNIA 306 Score = 89.2 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 71/189 (37%), Gaps = 10/189 (5%) Query: 355 QQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDE 414 + + +G EG + + D I + + +G++ D+ E V K GD Sbjct: 20 EYDYQRPERGQLREGIVMRVEDSQILVDIGAKHEGVIPNQDL--RRLPPELVSGIKNGDT 77 Query: 415 IAAVVLQVDAERERISLGVKQLA-EDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADG 473 + V++ +++ + L + + E + + + G I+ V + G V++ Sbjct: 78 LQVYVMEPESKEGELVLSLNMVQVERDWQEAQTMLENGQIIEAGVVGYNKGGLLVQVG-R 136 Query: 474 VEGYLRASEASRDRVEDATLVLS------VGDEVEAKFTGVDRKNRAISLSVRAKDEADE 527 V G++ AS+ T VG + K VDR + LS RA + Sbjct: 137 VRGFVPASQVVNLHSRTGTEGQQSAMTKMVGQNIPLKVIEVDRDRNRLVLSERAAMQRWR 196 Query: 528 KDAIATVNK 536 + + + Sbjct: 197 QSQKERLLE 205 >UniRef50_O06000 30S ribosomal protein S1 homolog n=76 Tax=Bacillaceae RepID=RS1H_BACC1 Length = 382 Score = 281 bits (720), Expect = 4e-74, Method: Composition-based stats. Identities = 121/350 (34%), Positives = 203/350 (58%), Gaps = 7/350 (2%) Query: 6 AQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE---LEI 62 ++ EE + E + G +V G V +++ VLV+ G K++ IP + N E + Sbjct: 3 EKMNEEVMDSKELQVGDVVTGSVTKVEEKQVLVNVGYKTDGVIPISELANVHIEKASDVV 62 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 ++ +++ + +E + +LS+ +AWI L++ + + V GG V Sbjct: 63 ELDQILELKIIKLE--ENDLVLSKRAVDAEKAWIELQEKFTSGHVFDVTVKDIVNGGLVV 120 Query: 123 ELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 +L G+R F+P SLV+V V D +GK L K+++LD+++N V++S +AV+E E +++ Sbjct: 121 DL-GVRGFIPASLVEVHYVEDFTDYKGKTLAVKIVELDREKNRVILSHKAVVELELDSKK 179 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 + + +L+EG V+G V+ LTD+GAFV++GGVDGL+HI+ ++ +RV+ PSE++ G ++ Sbjct: 180 KEAISSLKEGDVVEGTVQRLTDFGAFVNVGGVDGLVHISQISHERVEQPSEVLEQGQKVK 239 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 VKVL D + R+SL +K PW IA G G V L +G FVEI GVEG Sbjct: 240 VKVLSVDADTQRISLSIKAAQPGPWENIAGEVKAGDIREGIVKRLVTFGAFVEILPGVEG 299 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN 352 LVHVS++ +P++V+ +G V+V VL++ +RISL +K+ Sbjct: 300 LVHVSQIA-NRHVKNPNEVLEMGQEVKVKVLEVHVAEKRISLSIKEAFEE 348 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 102/389 (26%), Positives = 184/389 (47%), Gaps = 18/389 (4%) Query: 177 ENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIV 235 E E + LQ G V G V + + V++G DG++ I+++A ++ S++V Sbjct: 3 EKMNEEVMDSKELQVGDVVTGSVTKVEEKQVLVNVGYKTDGVIPISELANVHIEKASDVV 62 Query: 236 NVGDEITVKVLKFDRERTRVSLGLKQLG-EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFV 294 + + +K++K + + L + + E W+ + +++ G V ++ + G V Sbjct: 63 ELDQILELKIIKLEEND--LVLSKRAVDAEKAWIELQEKFTSGHVFDVTVKDIVNGGLVV 120 Query: 295 EIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKA--- 351 ++ GV G + S + + + G + V ++++D E+ R+ L K Sbjct: 121 DL--GVRGFIPAS-LVEVHYVEDFTDY--KGKTLAVKIVELDREKNRVILSHKAVVELEL 175 Query: 352 -NPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYK 410 + ++ + +GD VEG ++ +TDFG F+ + GG+DGLVH+S IS E+ + Sbjct: 176 DSKKKEAISSLKEGDVVEGTVQRLTDFGAFVNV-GGVDGLVHISQISHERV-EQPSEVLE 233 Query: 411 KGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVEL 470 +G ++ VL VDA+ +RISL +K P+ N K G I G V + GA VE+ Sbjct: 234 QGQKVKVKVLSVDADTQRISLSIKAAQPGPWENIAGEVKAGDIREGIVKRLVTFGAFVEI 293 Query: 471 ADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEAD---E 527 GVEG + S+ + V++ VL +G EV+ K V + ISLS++ E + E Sbjct: 294 LPGVEGLVHVSQIANRHVKNPNEVLEMGQEVKVKVLEVHVAEKRISLSIKEAFEENNVTE 353 Query: 528 KDAIATVNKQEDANFSNNAMAEAFKAAKG 556 + N ++ + E K K Sbjct: 354 DYSQYEPNADSATFQLSDIIGEQLKKLKK 382 >UniRef50_D0LLG7 RNA binding S1 domain protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LLG7_HALO1 Length = 410 Score = 281 bits (718), Expect = 6e-74, Method: Composition-based stats. Identities = 123/373 (32%), Positives = 202/373 (54%), Gaps = 22/373 (5%) Query: 2 TESFAQLFEESLKE---------IETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQ 52 E FA L + KE + G V G VV++ + V K+E+ + +Q Sbjct: 7 QEDFAALLDAFEKEHSADEKPGRKRPQVGDTVTGQVVSVGSEAAFVQVDGKTEAFLGLDQ 66 Query: 53 FKNAQGELEIQVGDEVDVALDAVEDGFGETLL----SREKAKRHEAWITLEKAYEDAETV 108 + GE+ +Q GD V+ + + R +A LE+A+ V Sbjct: 67 ITDENGEILVQEGDTVEARIVEMRGDMPVLRTVVAGGRSAGHGPDAVAELEQAHAHGLPV 126 Query: 109 TGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKV--IKLDQKRNNV 166 G I KGG V++ G+R F P S + V D GK+L F++ ++ +K+ N+ Sbjct: 127 EGQITAVNKGGVEVQVGGVRGFCPISQLSDSFVEDAGEYVGKKLSFRITRLETSRKQANL 186 Query: 167 VVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWK 226 V+SRRA++E +A + L+EG+ ++G V ++ +GAFVD+GG++G++H++++ + Sbjct: 187 VLSRRALLEEAKAAIAAETRARLREGVTIRGTVTSMKPFGAFVDIGGLEGMIHVSELGFG 246 Query: 227 RVKHPSEIVNVGDEITVKVLKFD-------RERTRVSLGLKQLGEDPWVAIAKRYPEGTK 279 RV HP ++++VG E+ V+VL+ + + R R++L +K L +DPW AI +RY G + Sbjct: 247 RVDHPEDVLHVGQEVDVQVLRIEETRDKDAKRRERIALSMKALADDPWDAIEQRYGNGGQ 306 Query: 280 LTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEER 339 GRV L +G F+EIE G+EGL H+S++ + HP +V+ VGD VEV VL ++ ER Sbjct: 307 AKGRVVRLQPFGAFIEIEPGIEGLAHISQLGAGRRIQHPREVLKVGDEVEVNVLGVERER 366 Query: 340 RRISLGLKQCKAN 352 RRISL + Sbjct: 367 RRISLSIGGATDE 379 Score = 211 bits (538), Expect = 5e-53, Method: Composition-based stats. Identities = 94/404 (23%), Positives = 177/404 (43%), Gaps = 31/404 (7%) Query: 172 AVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKH 230 E E+SA+ + Q G V G V ++ AFV + G + L + + ++ Sbjct: 15 DAFEKEHSADEKPGRKRPQVGDTVTGQVVSVGSEAAFVQVDGKTEAFLGLDQITD---EN 71 Query: 231 PSEIVNVGDEITVKVLKFDRE----RTRVSLGLKQ-LGEDPWVAIAKRYPEGTKLTGRVT 285 +V GD + ++++ + RT V+ G G D + + + G + G++T Sbjct: 72 GEILVQEGDTVEARIVEMRGDMPVLRTVVAGGRSAGHGPDAVAELEQAHAHGLPVEGQIT 131 Query: 286 NLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRR--IS 343 + G GV G +S++ + + V G + + ++ R++ + Sbjct: 132 AVNKGGVE-VQVGGVRGFCPISQLSDS-FVEDAGEYV--GKKLSFRITRLETSRKQANLV 187 Query: 344 LG----LKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWN 399 L L++ KA + +G + G + S+ FG F+ + GG++G++H+S++ + Sbjct: 188 LSRRALLEEAKAAIAAETRARLREGVTIRGTVTSMKPFGAFVDI-GGLEGMIHVSELGFG 246 Query: 400 VAGEEAVREYKKGDEIAAVVLQVDAER-------ERISLGVKQLAEDPFNNWVALNKKGA 452 + G E+ VL+++ R ERI+L +K LA+DP++ G Sbjct: 247 RV-DHPEDVLHVGQEVDVQVLRIEETRDKDAKRRERIALSMKALADDPWDAIEQRYGNGG 305 Query: 453 IVTGKVTAVDAKGATVELADGVEGYLRASEA-SRDRVEDATLVLSVGDEVEAKFTGVDRK 511 G+V + GA +E+ G+EG S+ + R++ VL VGDEVE GV+R+ Sbjct: 306 QAKGRVVRLQPFGAFIEIEPGIEGLAHISQLGAGRRIQHPREVLKVGDEVEVNVLGVERE 365 Query: 512 NRAISLSVRAKDEADE--KDAIATVNKQEDANFSNNAMAEAFKA 553 R ISLS+ + E +A + + + A+ K Sbjct: 366 RRRISLSIGGATDEHEAGASEVAAHAARSTSGGNLGTFADLLKK 409 Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats. Identities = 100/373 (26%), Positives = 173/373 (46%), Gaps = 20/373 (5%) Query: 76 EDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNG-IRAFLPGS 134 E LL + + K + +TVTG + V+++G AFL Sbjct: 6 EQEDFAALLDAFEKEHSADEKPGRKRPQVGDTVTGQVVSVGSEAAFVQVDGKTEAFLGLD 65 Query: 135 LVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQE-GM 193 + L EG +E +++++ + + + + LE G+ Sbjct: 66 QITDENGE-ILVQEGDTVEARIVEMRGDMPVLRTVVAGGRSAGHGPDAVAELEQAHAHGL 124 Query: 194 EVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERT 253 V+G + + G V +GGV G I+ ++ V+ E VG +++ ++ + + R Sbjct: 125 PVEGQITAVNKGGVEVQVGGVRGFCPISQLSDSFVEDAGEY--VGKKLSFRITRLETSRK 182 Query: 254 R--VSLGLKQLGEDPWVAIA----KRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVS 307 + + L + L E+ AIA R EG + G VT++ +G FV+I G+EG++HVS Sbjct: 183 QANLVLSRRALLEEAKAAIAAETRARLREGVTIRGTVTSMKPFGAFVDIG-GLEGMIHVS 241 Query: 308 EMDWTNKNIHPSKVVNVGDVVEVMVLDIDEER-------RRISLGLKQCKANPWQQFAET 360 E+ + + HP V++VG V+V VL I+E R RI+L +K +PW + Sbjct: 242 ELGFG-RVDHPEDVLHVGQEVDVQVLRIEETRDKDAKRRERIALSMKALADDPWDAIEQR 300 Query: 361 HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL 420 + G + +G++ + FG FI ++ GI+GL H+S + + K GDE+ VL Sbjct: 301 YGNGGQAKGRVVRLQPFGAFIEIEPGIEGLAHISQLGAGRRIQHPREVLKVGDEVEVNVL 360 Query: 421 QVDAERERISLGV 433 V+ ER RISL + Sbjct: 361 GVERERRRISLSI 373 Score = 56.5 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 40/113 (35%), Gaps = 6/113 (5%) Query: 4 SFAQLFEESLKEIETRPGS--IVRGVVVAIDKDVVLVDAGLKSESAIPAEQF----KNAQ 57 S L ++ IE R G+ +G VV + ++ E Q + Sbjct: 285 SMKALADDPWDAIEQRYGNGGQAKGRVVRLQPFGAFIEIEPGIEGLAHISQLGAGRRIQH 344 Query: 58 GELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTG 110 ++VGDEV+V + VE LS A E A A + +G Sbjct: 345 PREVLKVGDEVEVNVLGVERERRRISLSIGGATDEHEAGASEVAAHAARSTSG 397 >UniRef50_D1Z6Q4 Whole genome shotgun sequence assembly, scaffold_7 n=3 Tax=Sordariales RepID=D1Z6Q4_SORMA Length = 1776 Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats. Identities = 106/566 (18%), Positives = 217/566 (38%), Gaps = 66/566 (11%) Query: 19 RPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE---IQVGDEVDVALDAV 75 R G V G V I V V G K + +P + + + V + +V Sbjct: 808 RVGEEVAGYVRNITATAVFVQFGGKLTALLPKSMIPKEDQDKPDFGMFKSQSITVKITSV 867 Query: 76 EDGFGETLLSREKAKRHEAWITLEKAYEDAETVT---------------GVINGKVKGGF 120 + +++ A + + + Sbjct: 868 NNELNRLVVAVPGATEQVKRVDTKGEKLANPVDESITSLDDISIGKLTKARVVSVKDTQV 927 Query: 121 TVEL-NGIRAFLPGSLV--DVRPVRDTLHLEG-----KELEFKVIKLDQKRN-------- 164 V+L + I+ + S V + ++DT + + +V+ + RN Sbjct: 928 NVQLADNIQGRIDVSQVYDNWEQIKDTKKPLKKFQPKQVVPVRVLGVHDARNHRFLPISH 987 Query: 165 -----NVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLL 218 + +S + E ++ +NL+ G G V N+ +V+L V G + Sbjct: 988 RSSHSVLELSAKPSDVKEGASSEALSFDNLKVGSSYVGFVNNVGQGHLWVNLSPTVRGRV 1047 Query: 219 HITDMAWK--RVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQL---GEDPWVAIAKR 273 + + + + + ++ +G + V+V+ D E R+ L + E W IA+ Sbjct: 1048 NAMEASDDVSLLTNLAKNFPIGSALRVRVVSVDAESKRLDLSARSPGSEDELTWDKIAQD 1107 Query: 274 YPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVL 333 L G+VT + + V++ E + G VH ++ + +P+K ++V V V+ Sbjct: 1108 V----ILVGKVTKVDERQVIVKLSETLAGPVHKVDLADDYEEANPAK-FAKNEIVRVAVV 1162 Query: 334 DIDEERRRISLGLKQCK--------ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDG 385 ++D+ +RI L + + + G+ V G +K+++D G+F+ L G Sbjct: 1163 EVDKSNKRIRLSTRPSRILNSSLPVKDKEIVQHTKLEVGEIVRGFVKNVSDKGLFVTLGG 1222 Query: 386 GIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNW- 444 + V + ++S + +++ + ++ V RI + +K D Sbjct: 1223 NVTAFVQIKNLSDAY-LKYWKEQFQVDQLVKGRIVSV--ANGRIEMSLKPSVVDKDYVPL 1279 Query: 445 --VALNKKGAIVTGKVTAVDAKGATVELA--DGVEGYLRASEASRDRVEDATLVLSVGDE 500 ++ K+G +TG+V V+ GA +++ D + G SE S V+DA + GD+ Sbjct: 1280 TTISDLKEGQTITGRVRKVEEFGAFIDIDGSDNLSGLCHRSEMSDKAVKDARKLYEEGDK 1339 Query: 501 VEAKFTGVDRKNRAISLSVRAKDEAD 526 V+AK VD + I+L ++ + Sbjct: 1340 VKAKVLKVDATAKRINLGLKPSYFGE 1365 Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats. Identities = 101/597 (16%), Positives = 212/597 (35%), Gaps = 53/597 (8%) Query: 9 FEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQGELEIQVG 65 E G G ++ + + +V + +P + + +VG Sbjct: 614 LPAIQTYDEITVGQQALGTIINVLQHGAIVQFYGRLRGFLPVSEMSEAYIHDPKEHFRVG 673 Query: 66 DEVDVALDAVEDGFGETLL-SREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL 124 V + + + + + ++ ++ A K + + V+ + K VEL Sbjct: 674 QTVSIYVISFDPDAAKLIVSCKDPAAFGLEKQLALKKLQIGDVVSAKVTQKTDDDVFVEL 733 Query: 125 --NGIRAFLPGSLVDVRPVRDTLH-----LEGKEL-EFKVIKLDQKRNNVVVSRRAVIES 176 + ++A LP + + + V T + L E +++ ++ R ++++S++ ++ Sbjct: 734 ADSSLKAILPVAHLTDKSVSKTQSALKKIHVNQTLSELVILEKNEARRSIILSQKPILVK 793 Query: 177 ENSAERD-QLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEI 234 + L+ + G EV G V+N+T FV GG + LL + + + P Sbjct: 794 ATKEGKFLTSLDGARVGEEVAGYVRNITATAVFVQFGGKLTALLPKSMIPKEDQDKPDFG 853 Query: 235 VNVGDEITVKVLKFDRERTRVSLGLKQLGED----------------PWVAIAKRYPEGT 278 + ITVK+ + E R+ + + E + G Sbjct: 854 MFKSQSITVKITSVNNELNRLVVAVPGATEQVKRVDTKGEKLANPVDESITSLDDISIGK 913 Query: 279 KLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNK----NIHPSKVVNVGDVVEVMVLD 334 RV ++ D V++ + ++G + VS++ + P K VV V VL Sbjct: 914 LTKARVVSVKDTQVNVQLADNIQGRIDVSQVYDNWEQIKDTKKPLKKFQPKQVVPVRVLG 973 Query: 335 IDEERRR-------------ISLGLKQCKANPWQQF----AETHNKGDRVEGKIKSITDF 377 + + R + L K + G G + ++ Sbjct: 974 VHDARNHRFLPISHRSSHSVLELSAKPSDVKEGASSEALSFDNLKVGSSYVGFVNNVGQG 1033 Query: 378 GIFIGLDGGIDGLVHLSDISWNV-AGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQL 436 +++ L + G V+ + S +V + + G + V+ VDAE +R+ L + Sbjct: 1034 HLWVNLSPTVRGRVNAMEASDDVSLLTNLAKNFPIGSALRVRVVSVDAESKRLDLSARSP 1093 Query: 437 AEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLS 496 + W + + I+ GKVT VD + V+L++ + G + + + D E + Sbjct: 1094 GSEDELTWDKIAQ-DVILVGKVTKVDERQVIVKLSETLAGPVHKVDLADDYEEANPAKFA 1152 Query: 497 VGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKA 553 + V VD+ N+ I LS R + + + + F Sbjct: 1153 KNEIVRVAVVEVDKSNKRIRLSTRPSRILNSSLPVKDKEIVQHTKLEVGEIVRGFVK 1209 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 95/574 (16%), Positives = 170/574 (29%), Gaps = 85/574 (14%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK---------------- 54 ESL GS+V G V AI+ + V +P Sbjct: 145 ESLNFKRLVKGSLVLGSVCAINALDIAVALPNNIIGHVPITAISAPLTKRLEASAGDDDA 204 Query: 55 ---------NAQGELEIQVGDEVDVALDAV-------EDGFGETLLSREKAKRHEAWITL 98 + E Q+G V + + G + + Sbjct: 205 EESDDENENDVDLESIFQIGQYVRAYVVSTVDEASTHTPGKAKRHIELSLQPSLANTGMA 264 Query: 99 EKAYEDAETVTGVINGKVKGGFTVELN----GIRAFLPGSLVDVRPVRDTLHLEGKELEF 154 E+ TV I G+ +++ ++ FL VD + + G L Sbjct: 265 EQDVVVNSTVMAAIASVEDHGYVMDIEIADSKLQGFLARKQVD-KSIPQEALQPGAVLLC 323 Query: 155 KVIKLDQKRNNVVVSRRAVI-ESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG 213 V K + + + + I EN ++ G +V ++++G + G Sbjct: 324 MVTKSAKGKIVQLSTLGETIGNVENVPAAATTIDTFLPGTAADVLVSEVSNHGIVGKIMG 383 Query: 214 ----VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQL------- 262 L+H + VG + +V+ LG+ L Sbjct: 384 SLDVTADLVHSGAGPDG--VDLEDTYKVGSRLKARVICNFPTAKNPKLGISVLKHVTSLK 441 Query: 263 ------GEDPWVAIAKRYPEGTKLTGRVTNLTD-YGCFVEIEEGVEGLVHVSEMDWTNKN 315 E P V + V + G +V++ G Sbjct: 442 PKTASKDEQPVVPLQALPHSTIVEKCTVKQVEPEIGLYVDVGVEDVG------------- 488 Query: 316 IHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSIT 375 VG V V+ + + L++ E G V G ++ + Sbjct: 489 -----PYKVGSVHAGRVVGYNAFDGMYLISLEKSVLEQPFLRIEDIPVGAVVSGVVEKMV 543 Query: 376 DF-----GIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERIS 430 G+ + + GI GLV + V + +++++G ++ A VL DA +I Sbjct: 544 LNAAGVGGLIVKIADGISGLVPEMHFAD-VHLQNPEKKFREGLKVKARVLSTDAASRQIR 602 Query: 431 LGVKQ---LAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDR 487 L +K+ ++ P G G + V GA V+ + G+L SE S Sbjct: 603 LTLKKTLVNSDLPAIQTYDEITVGQQALGTIINVLQHGAIVQFYGRLRGFLPVSEMSEAY 662 Query: 488 VEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRA 521 + D VG V D + +S + Sbjct: 663 IHDPKEHFRVGQTVSIYVISFDPDAAKLIVSCKD 696 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 61/438 (13%), Positives = 137/438 (31%), Gaps = 55/438 (12%) Query: 148 EGKELEFKVIK-LDQKRNNVVVSRRAVIESENSAERDQL---LENLQEGMEVKGIVKNLT 203 G+ + V+ +D+ + + IE +++ V + ++ Sbjct: 223 IGQYVRAYVVSTVDEASTHTPGKAKRHIELSLQPSLANTGMAEQDVVVNSTVMAAIASVE 282 Query: 204 DYGAFVDLG----GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGL 259 D+G +D+ + G L + P E + G + V K + V L Sbjct: 283 DHGYVMDIEIADSKLQGFLARKQVDKSI---PQEALQPGAVLLCMVTK-SAKGKIVQLST 338 Query: 260 ------KQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTN 313 + GT V+ ++++G +I ++ + Sbjct: 339 LGETIGNVENVPAAATTIDTFLPGTAADVLVSEVSNHGIVGKIMGSLDVTADLVHSGAGP 398 Query: 314 KNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCK------------ANPWQQFAETH 361 + VG ++ V+ + LG+ K + Sbjct: 399 DGVDLEDTYKVGSRLKARVICNFPTAKNPKLGISVLKHVTSLKPKTASKDEQPVVPLQAL 458 Query: 362 NKGDRVE-GKIKSITDF-GIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVV 419 VE +K + G+++ + G YK G A V Sbjct: 459 PHSTIVEKCTVKQVEPEIGLYVDVGVEDVG------------------PYKVGSVHAGRV 500 Query: 420 LQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAK-----GATVELADGV 474 + +A + +++ + + GA+V+G V + G V++ADG+ Sbjct: 501 VGYNAFDGMYLISLEKSVLEQPFLRIEDIPVGAVVSGVVEKMVLNAAGVGGLIVKIADGI 560 Query: 475 EGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATV 534 G + + +++ G +V+A+ D +R I L+++ + AI T Sbjct: 561 SGLVPEMHFADVHLQNPEKKFREGLKVKARVLSTDAASRQIRLTLKKTLVNSDLPAIQTY 620 Query: 535 NKQEDANFSNNAMAEAFK 552 ++ + + + Sbjct: 621 DEITVGQQALGTIINVLQ 638 Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 73/177 (41%), Gaps = 8/177 (4%) Query: 10 EESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQG---ELEIQVGD 66 +E ++ + G IVRG V + + V G + + + +A + + QV Sbjct: 1190 KEIVQHTKLEVGEIVRGFVKNVSDKGLFVTLGGNVTAFVQIKNLSDAYLKYWKEQFQVDQ 1249 Query: 67 EVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNG 126 V + +V +G E L + +T ++ +T+TG + + G ++++G Sbjct: 1250 LVKGRIVSVANGRIEMSLKPSVVDKDYVPLTTISDLKEGQTITGRVRKVEEFGAFIDIDG 1309 Query: 127 ---IRAFLPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 + S + + V+D L EG +++ KV+K+D + + + E Sbjct: 1310 SDNLSGLCHRSEMSDKAVKDARKLYEEGDKVKAKVLKVDATAKRINLGLKPSYFGEQ 1366 >UniRef50_C5NX49 30S ribosomal protein S1 n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NX49_9BACL Length = 402 Score = 279 bits (713), Expect = 2e-73, Method: Composition-based stats. Identities = 121/368 (32%), Positives = 194/368 (52%), Gaps = 23/368 (6%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDA-GLKSESAIPAEQFKN---A 56 MT SF +L S + G V G V ID D V VD G + + I Q Sbjct: 1 MTTSFEELLNSSEM---LKKGDKVTGTVSKIDNDKVYVDVAGAQYDCVILRNQITRKPFE 57 Query: 57 QGELEIQVGDEVDVALDAV--------EDGFGETLLSREKAK-------RHEAWITLEKA 101 E + VGDEV+ + + ED G LS + + +W + + Sbjct: 58 NIEDVLSVGDEVEAQVTGIRADREKRSEDVPGVIYLSHKILENAEYKKLMELSWAGIIEK 117 Query: 102 YEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQ 161 +E+ E + ++G+ KGG ++ G+RAF+PGS +D + +D G E FK+ ++D+ Sbjct: 118 FENGELIQATVSGQTKGGLLADVEGLRAFIPGSYIDTKFRKDLSKFVGNEYTFKIEEVDK 177 Query: 162 KRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHIT 221 +N ++++RR ++E E + + ++ N+ EG ++G V +TD+GAFV++G VDGLLHI+ Sbjct: 178 SKNKIILNRRVILEEEKAKKLAEVYGNINEGDVIEGKVSRITDFGAFVNIGEVDGLLHIS 237 Query: 222 DMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLT 281 +++ RV+ +++++VGD I V V+ D+E +VSL K L W G L Sbjct: 238 EISHARVEKVADVLSVGDTIKVAVIAVDKENEKVSLSAKTLLPTQWEVARATIKAGDALE 297 Query: 282 GRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRR 341 G V N T +G FVE+ VEGLVH+S++ + + V+ GD V V VL+ D E R Sbjct: 298 GVVRNTTAFGAFVEVLPDVEGLVHISQISHE-RVTNVEDVLKKGDKVNVKVLEFDFENER 356 Query: 342 ISLGLKQC 349 +SL +K+ Sbjct: 357 LSLSIKEL 364 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 101/393 (25%), Positives = 175/393 (44%), Gaps = 32/393 (8%) Query: 187 ENLQEGMEVKGIVKNLTDYGAFVDLGG--VDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 E L++G +V G V + + +VD+ G D ++ + K ++ ++++VGDE+ + Sbjct: 13 EMLKKGDKVTGTVSKIDNDKVYVDVAGAQYDCVILRNQITRKPFENIEDVLSVGDEVEAQ 72 Query: 245 VLKFDRERTR--------VSLGLK--------QLGEDPWVAIAKRYPEGTKLTGRVTNLT 288 V +R + + L K +L E W I +++ G + V+ T Sbjct: 73 VTGIRADREKRSEDVPGVIYLSHKILENAEYKKLMELSWAGIIEKFENGELIQATVSGQT 132 Query: 289 DYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQ 348 G ++E G+ + S + T SK V G+ + ++D+ + +I L + Sbjct: 133 KGGLLADVE-GLRAFIPGSYI-DTKFRKDLSKFV--GNEYTFKIEEVDKSKNKIILNRRV 188 Query: 349 CKANPWQQF----AETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEE 404 + N+GD +EGK+ ITDFG F+ + +DGL+H+S+IS + Sbjct: 189 ILEEEKAKKLAEVYGNINEGDVIEGKVSRITDFGAFVNIGE-VDGLLHISEISHARVEK- 246 Query: 405 AVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAK 464 GD I V+ VD E E++SL K L + A K G + G V A Sbjct: 247 VADVLSVGDTIKVAVIAVDKENEKVSLSAKTLLPTQWEVARATIKAGDALEGVVRNTTAF 306 Query: 465 GATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDE 524 GA VE+ VEG + S+ S +RV + VL GD+V K D +N +SLS++ E Sbjct: 307 GAFVEVLPDVEGLVHISQISHERVTNVEDVLKKGDKVNVKVLEFDFENERLSLSIKELLE 366 Query: 525 ADEKDAIATVNKQE----DANFSNNAMAEAFKA 553 K+ + + + ++ + + FK Sbjct: 367 KPVKEEVKEEVEYDTSYLKDGDTSFNLGDKFKD 399 Score = 78.8 bits (193), Expect = 5e-13, Method: Composition-based stats. Identities = 42/200 (21%), Positives = 78/200 (39%), Gaps = 21/200 (10%) Query: 352 NPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDG-GIDGLVHLSDISWNVAGEEAVREYK 410 +E KGD+V G + I + +++ + G D ++ + I+ E Sbjct: 6 EELLNSSEMLKKGDKVTGTVSKIDNDKVYVDVAGAQYDCVILRNQITRK-PFENIEDVLS 64 Query: 411 KGDEIAAVVLQVDAERER--------ISLGVKQLA--------EDPFNNWVALNKKGAIV 454 GDE+ A V + A+RE+ I L K L E + + + G ++ Sbjct: 65 VGDEVEAQVTGIRADREKRSEDVPGVIYLSHKILENAEYKKLMELSWAGIIEKFENGELI 124 Query: 455 TGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRA 514 V+ G ++ +G+ ++ S +D + VG+E K VD+ Sbjct: 125 QATVSGQTKGGLLADV-EGLRAFIPGSYIDTKFRKDLSKF--VGNEYTFKIEEVDKSKNK 181 Query: 515 ISLSVRAKDEADEKDAIATV 534 I L+ R E ++ +A V Sbjct: 182 IILNRRVILEEEKAKKLAEV 201 >UniRef50_B3T9S8 Putative S1 RNA binding domain protein n=1 Tax=uncultured marine microorganism HF4000_APKG7H23 RepID=B3T9S8_9ZZZZ Length = 379 Score = 279 bits (713), Expect = 2e-73, Method: Composition-based stats. Identities = 129/364 (35%), Positives = 206/364 (56%), Gaps = 9/364 (2%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK--NAQG 58 + S A+L +++ G IV G V+ D D +LV G K E IPA + + + G Sbjct: 11 LQPSMAELLDQAAPLQSLHRGDIVEGQVMRCDSDGILVSIGHKLEGIIPAREMRLLSRFG 70 Query: 59 ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 + + QVG V V + G+ +LS +KA+ E W L++ E + VTG I G +G Sbjct: 71 QDQSQVGATVLVYVLDPAGVEGQAILSLDKAQGEEVWHRLQQCAEAGQGVTGTIVGFNRG 130 Query: 119 GFTVELNGIRAFLPGSLVDVR------PVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRA 172 G V++ G++AF+P S + + G+E+ KV++++++R V+S RA Sbjct: 131 GAVVDVEGLQAFVPLSQMVLSIQAGGDTAEALAQRVGEEVSLKVLEVNRRRGRAVLSERA 190 Query: 173 VIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPS 232 ++ + +R+QL LQEG KG+V ++ +GAFVD+GG DGL+HI++++W V Sbjct: 191 MLREQREEQREQLFGELQEGEVRKGVVTGISSFGAFVDIGGADGLIHISELSWSPVSSVE 250 Query: 233 EIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGC 292 E+V V E+ V +L+ DRE R++L L+QL PW A+++ G ++G VT L D+G Sbjct: 251 EVVQVSQEVEVYILRVDREHRRIALSLRQLSPTPWTQAAQQFALGQLVSGTVTKLADFGA 310 Query: 293 FVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN 352 F +EE VEGL+HVSE+ HP +VV VGD + + ++ +D ER RI L L+Q + Sbjct: 311 FTRVEETVEGLIHVSELSD-RHIRHPREVVQVGDSLTLRIVSLDLERHRIGLSLRQVEDP 369 Query: 353 PWQQ 356 + Sbjct: 370 EGKF 373 Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 91/367 (24%), Positives = 167/367 (45%), Gaps = 13/367 (3%) Query: 176 SENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEI 234 ++ L++L G V+G V G V +G ++G++ +M + + Sbjct: 15 MAELLDQAAPLQSLHRGDIVEGQVMRCDSDGILVSIGHKLEGIIPAREM-RLLSRFGQDQ 73 Query: 235 VNVGDEITVKVLKFDRERTRVSLGL-KQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCF 293 VG + V VL + L L K GE+ W + + G +TG + G Sbjct: 74 SQVGATVLVYVLDPAGVEGQAILSLDKAQGEEVWHRLQQCAEAGQGVTGTIVGFNRGGAV 133 Query: 294 VEIEEGVEGLVHVSEMDWT-NKNIHPSKVV--NVGDVVEVMVLDIDEERRRISLG----L 346 V++E G++ V +S+M + ++ + VG+ V + VL+++ R R L L Sbjct: 134 VDVE-GLQAFVPLSQMVLSIQAGGDTAEALAQRVGEEVSLKVLEVNRRRGRAVLSERAML 192 Query: 347 KQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAV 406 ++ + +Q +G+ +G + I+ FG F+ + GG DGL+H+S++SW+ Sbjct: 193 REQREEQREQLFGELQEGEVRKGVVTGISSFGAFVDI-GGADGLIHISELSWSPVSSVEE 251 Query: 407 REYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGA 466 E+ +L+VD E RI+L ++QL+ P+ G +V+G VT + GA Sbjct: 252 VVQVS-QEVEVYILRVDREHRRIALSLRQLSPTPWTQAAQQFALGQLVSGTVTKLADFGA 310 Query: 467 TVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEAD 526 + + VEG + SE S + V+ VGD + + +D + I LS+R ++ + Sbjct: 311 FTRVEETVEGLIHVSELSDRHIRHPREVVQVGDSLTLRIVSLDLERHRIGLSLRQVEDPE 370 Query: 527 EKDAIAT 533 K + Sbjct: 371 GKFEESK 377 Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats. Identities = 67/300 (22%), Positives = 118/300 (39%), Gaps = 14/300 (4%) Query: 258 GLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIH 317 + +L + + G + G+V G V I +EG++ EM ++ Sbjct: 14 SMAELLDQAAP--LQSLHRGDIVEGQVMRCDSDGILVSIGHKLEGIIPAREMRLLSRFG- 70 Query: 318 PSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAET-HNKGDRVEGKIKSITD 376 VG V V VLD + L L + + + G V G I Sbjct: 71 -QDQSQVGATVLVYVLDPAGVEGQAILSLDKAQGEEVWHRLQQCAEAGQGVTGTIVGFNR 129 Query: 377 FGIFIGLDGGIDGLVHLSDISWNV-AGEEAVREY--KKGDEIAAVVLQVDAERERISLGV 433 G + ++ G+ V LS + ++ AG + + G+E++ VL+V+ R R L Sbjct: 130 GGAVVDVE-GLQAFVPLSQMVLSIQAGGDTAEALAQRVGEEVSLKVLEVNRRRGRAVLSE 188 Query: 434 KQLAEDPFNNW----VALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVE 489 + + + ++G + G VT + + GA V++ G +G + SE S V Sbjct: 189 RAMLREQREEQREQLFGELQEGEVRKGVVTGISSFGAFVDIG-GADGLIHISELSWSPVS 247 Query: 490 DATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAE 549 V+ V EVE VDR++R I+LS+R A + + + +A+ Sbjct: 248 SVEEVVQVSQEVEVYILRVDREHRRIALSLRQLSPTPWTQAAQQFALGQLVSGTVTKLAD 307 Score = 88.5 bits (218), Expect = 7e-16, Method: Composition-based stats. Identities = 31/175 (17%), Positives = 62/175 (35%), Gaps = 8/175 (4%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDV---ALD 73 E + G + +GVV I VD G ++ I + + +V + Sbjct: 206 ELQEGEVRKGVVTGISSFGAFVDIGG-ADGLIHISELSWSPVSSVEEVVQVSQEVEVYIL 264 Query: 74 AVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNG-IRAFLP 132 V+ LS + W + + + V+G + G + + + Sbjct: 265 RVDREHRRIALSLRQLSPTP-WTQAAQQFALGQLVSGTVTKLADFGAFTRVEETVEGLIH 323 Query: 133 GSLVDVRPVRDTLHLE--GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQL 185 S + R +R + G L +++ LD +R+ + +S R V + E E + Sbjct: 324 VSELSDRHIRHPREVVQVGDSLTLRIVSLDLERHRIGLSLRQVEDPEGKFEESKT 378 >UniRef50_A0JMT9 LOC779090 protein (Fragment) n=5 Tax=Tetrapoda RepID=A0JMT9_XENLA Length = 1427 Score = 277 bits (710), Expect = 5e-73, Method: Composition-based stats. Identities = 95/558 (17%), Positives = 198/558 (35%), Gaps = 31/558 (5%) Query: 1 MTESFAQLF---EESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ 57 + A E++ PG + + + + + + + + F+ + Sbjct: 254 IQNDVASALATVEQNWNLNNLLPGLVFKAQIEKVMHNNITLSFLSSYTGFVDFLHFEPKK 313 Query: 58 GELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAW--ITLEKAYEDAETVTGVINGK 115 + G EV + ++ L+ + L + + V+ Sbjct: 314 I-GSYKEGQEVKACILWLDPSTKTIRLTLRQCFLQPGNTLPQLTSDWVGSVLDNCVVQTL 372 Query: 116 VKG-GFTVEL-NGIRAFLPGSLVDVRPVRDTLHLE-GKELEFKVIKLDQKRNNVVVSRRA 172 K G EL G F + + G + ++ ++S + Sbjct: 373 FKNAGAVFELEGGNLGFAFKHHLSASKQPHFEKFKKGTTHKGRITDFSPMDEMHILSLK- 431 Query: 173 VIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHP 231 + E++Q G ++G VK + G V + + GL+ A +KHP Sbjct: 432 ---EKVITNLFLRHEDIQPGQVLEGTVKCMEAVGMVVQITDHLTGLVPKLHFADVLLKHP 488 Query: 232 SEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYP---EGTKLTGRVTNLT 288 + +G++I KVL ++ L K+ + + Y G G + + Sbjct: 489 EKKYIIGNKIKCKVLTVVTCERKLILTRKRTLMKSTLPVLASYEDAQPGLITHGFIVAIK 548 Query: 289 DYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQ 348 DYGC V+ V+GL E+ + G V++V VL+ + + +++ L + Sbjct: 549 DYGCLVKFYNEVQGLAPRRELGSLQEISSLEDAFYRGQVIKVQVLECNPQTQQLLLSFRI 608 Query: 349 CKANPWQQFAETHN--------KGDRVEGKIKSITDFGIFI-GLDGGIDGLVHLSDISWN 399 + +Q G V+ ++ S TD G+ + L + +S + Sbjct: 609 TEEGHTEQEQRFLKKIKAVKLDVGKLVDIRVLSKTDKGVNVLVLPEESPAFIPKMHLSDH 668 Query: 400 VAGEEAVRE-YKKGDEIAAVVLQVDAERERI----SLGVKQLAEDPFNNWVALNKKGAIV 454 V+ E + ++GD+I + + I SL + + + ++ + G + Sbjct: 669 VSNCELLWHTLQEGDDIPGAMCLSSLKGHSILTKKSLLISSVEKGSCVKVISEVQTGMHL 728 Query: 455 TGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRA 514 TG V ++ G VE G+ G + SE S V + G+ V A +D + + Sbjct: 729 TGFVKSIMPYGVFVEFPYGLFGLVPMSEISDKFVTNIRDHFVEGNTVVATVIKMDEEKKR 788 Query: 515 ISLSVRAKDEADEKDAIA 532 L+++ + A + +I Sbjct: 789 FLLTLKMSECAPDDYSIE 806 Score = 220 bits (562), Expect = 8e-56, Method: Composition-based stats. Identities = 94/578 (16%), Positives = 188/578 (32%), Gaps = 43/578 (7%) Query: 16 IETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE---------------- 59 + G + G V + V I A +A Sbjct: 74 SKLSVGMLFLGCVKRTKDFELTVSLPYCLTGYIQATNICDAYTNLISEQVEKDDPLEALV 133 Query: 60 ---LEIQVGDEVDVALDAVED-GFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGK 115 G V A+ ++E G + +H + + ++G ++ Sbjct: 134 PLSELYSPGMLVRCAISSLETTASGFPSVKLSVNPKHVNKALNTGSIKTGMVLSGCVSSV 193 Query: 116 VKGGFTVELN--GIRAFLP--GSLVDVRPVRDTLHL-EGKELEFKVIKLDQKRNNVVVS- 169 G+ V++ G +AFLP + + + L G+ L V ++ + V +S Sbjct: 194 EDHGYLVDIGVAGTKAFLPRQKAQLFLSQAGQGSLLRVGEYLNCVVEEVKNEGKIVRLSI 253 Query: 170 -RRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVD-LGGVDGLLHITDMAWKR 227 + V + + E++ L NL G+ K ++ + + L G + K+ Sbjct: 254 IQNDVASALATVEQNWNLNNLLPGLVFKAQIEKVMHNNITLSFLSSYTGFVDFLHFEPKK 313 Query: 228 VKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYP--EGTKLTGRVT 285 + G E+ +L D + L L+Q P + + G+ L V Sbjct: 314 IGS----YKEGQEVKACILWLDPSTKTIRLTLRQCFLQPGNTLPQLTSDWVGSVLDNCVV 369 Query: 286 N--LTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRIS 343 + G E+E G G + + + + G + + D Sbjct: 370 QTLFKNAGAVFELEGGNLGFAFKHHLSASKQPH--FEKFKKGTTHKGRITDFSPMDEMHI 427 Query: 344 LGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGE 403 L LK+ E G +EG +K + G+ + + + GLV + V + Sbjct: 428 LSLKEKVITNLFLRHEDIQPGQVLEGTVKCMEAVGMVVQITDHLTGLVPKLHFAD-VLLK 486 Query: 404 EAVREYKKGDEIAAVVLQVDAERERISLGVKQLAED---PFNNWVALNKKGAIVTGKVTA 460 ++Y G++I VL V ++ L K+ P + G I G + A Sbjct: 487 HPEKKYIIGNKIKCKVLTVVTCERKLILTRKRTLMKSTLPVLASYEDAQPGLITHGFIVA 546 Query: 461 VDAKGATVELADGVEGYLRASEA-SRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSV 519 + G V+ + V+G E S + G ++ + + + + + LS Sbjct: 547 IKDYGCLVKFYNEVQGLAPRRELGSLQEISSLEDAFYRGQVIKVQVLECNPQTQQLLLSF 606 Query: 520 RAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAAKGE 557 R +E + + K + + + +K + Sbjct: 607 RITEEGHTEQEQRFLKKIKAVKLDVGKLVDIRVLSKTD 644 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 87/522 (16%), Positives = 181/522 (34%), Gaps = 36/522 (6%) Query: 9 FEESLKEIETRPGSIVRGVVVAIDKDVVLVDAG-LKSESAIPAEQ----FKNAQGELEIQ 63 ++L + G ++ G V +++ LVD G +++ +P ++ A ++ Sbjct: 171 VNKALNTGSIKTGMVLSGCVSSVEDHGYLVDIGVAGTKAFLPRQKAQLFLSQAGQGSLLR 230 Query: 64 VGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAE-----TVTGVINGKVKG 118 VG+ ++ ++ V++ LS + A T+E+ + I + Sbjct: 231 VGEYLNCVVEEVKNEGKIVRLSIIQNDVASALATVEQNWNLNNLLPGLVFKAQIEKVMHN 290 Query: 119 GFTVEL-NGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESE 177 T+ + F+ + + + + EG+E++ ++ LD + ++ R Sbjct: 291 NITLSFLSSYTGFVDFLHFEPKKIG--SYKEGQEVKACILWLDPSTKTIRLTLRQCFLQP 348 Query: 178 NSAERDQLLENLQEGMEVKGIVKN--LTDYGAFVDLGGVD-GLLHITDMAWKRVKHPSEI 234 + + G + V + GA +L G + G ++ + H E Sbjct: 349 GNTLPQLTSDW--VGSVLDNCVVQTLFKNAGAVFELEGGNLGFAFKHHLSASKQPHF-EK 405 Query: 235 VNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFV 294 G ++ F L LK+ + G L G V + G V Sbjct: 406 FKKGTTHKGRITDFSPMDEMHILSLKEKVITNLFLRHEDIQPGQVLEGTVKCMEAVGMVV 465 Query: 295 EIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPW 354 +I + + GLV HP K +G+ ++ VL + R++ L K+ Sbjct: 466 QITDHLTGLVPKLHFADVL-LKHPEKKYIIGNKIKCKVLTVVTCERKLILTRKRTLMKST 524 Query: 355 QQFAETHN---KGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKK 411 ++ G G I +I D+G + + GL ++ + + Sbjct: 525 LPVLASYEDAQPGLITHGFIVAIKDYGCLVKFYNEVQGLAPRRELGSLQEISSLEDAFYR 584 Query: 412 GDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNK--------KGAIVTGKVTAVDA 463 G I VL+ + + +++ L + E K G +V +V + Sbjct: 585 GQVIKVQVLECNPQTQQLLLSFRITEEGHTEQEQRFLKKIKAVKLDVGKLVDIRVLSKTD 644 Query: 464 KGATVE-LADGVEGYLRASEASRDRVED---ATLVLSVGDEV 501 KG V L + ++ S V + L GD++ Sbjct: 645 KGVNVLVLPEESPAFIPKMHLSD-HVSNCELLWHTLQEGDDI 685 Score = 148 bits (373), Expect = 7e-34, Method: Composition-based stats. Identities = 91/613 (14%), Positives = 197/613 (32%), Gaps = 84/613 (13%) Query: 10 EESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVD 69 E+ L G + VV +++ + + A + G+ + G +V Sbjct: 832 EDELSIYTLIAGQKLTLVVENAEENGPVQFSAGSISGAQTVSATQYHIGDKALVAGQKVK 891 Query: 70 VALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNG--I 127 + V+ L + + + + + + + V L Sbjct: 892 AVVLHVD----MLTLHVHVSLNQTLLKKKQNVPKMNSSHSADVQHVAEEFAVVSLADSAH 947 Query: 128 RAFLPGS-LV-DVRPVRDTLHLEGKELEF--KVIKLDQKRNNVVVSRRAVIE-------- 175 +P S + D G+ + K +++ + V +A + Sbjct: 948 LIAVPVSSHLNDTFRFESEKLKVGETISVILKTTTVNEHGLLLAVQNKAASKTSKNLGRT 1007 Query: 176 -SENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKH--P 231 R + L+ G V G VK++ V + V G +H++ + + + P Sbjct: 1008 TQSAMRVRGAISHGLKIGDLVTGTVKSIKPTQVTVSINDNVFGFIHVSQIMDETPQGCFP 1067 Query: 232 SEIVNVGDEITVKVLK-FDRERTRV-------------SLGLKQ----LGEDPWVAIAKR 273 + +N E+T +V+ + + R L L P K Sbjct: 1068 TSKLNPKQEVTCRVIGGREVKTHRYLPITHPDFIHSVPELSLLPELINTDNVPKPRALKT 1127 Query: 274 YPEGTKLTGRVTNLTD--YGCFVEIEEGVEGLVHVSEMDWTNKN-IHPSKVVNVGDVVEV 330 + G K+T V VEI + G + + + T KN P K+ G + Sbjct: 1128 FNPGDKVTCYVNKFNTETKYLEVEITPEIRGRIELLLLSQTPKNLKRPEKLFKNGQALSA 1187 Query: 331 MVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDF-GIFIGLDGGIDG 389 V+ D + + L L + +G + + G+ + L G G Sbjct: 1188 TVVGPDAVHKHLCLSLTG---------IHSLEEGAVTVACVTKVVKGSGLTLSLPFGKTG 1238 Query: 390 LVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNW----- 444 ++ + E ++ ++ G + +L + + + ++Q + Sbjct: 1239 NANMFHLCDKY-AEASLEKFTPGKFVRCAILS---NSKIVKVSLRQSRVNQQAQSSAVDE 1294 Query: 445 ----VALNKKGAIVTGKVTAVD-AKGATVELADGVEGYLRASEASRDRVEDAT---LVLS 496 + ++G +V+G V+A+ KG L+ + G+++ + V + + + Sbjct: 1295 DIASIDSLEEGQLVSGFVSAITENKGVFFRLSSFIVGHIQFQNVTSYFVYEPSAYSNYIP 1354 Query: 497 VGDEVEAKFTGVDRKNRAISLSVRAKD--------------EADEKDAIATVNKQEDANF 542 G + AK +D + + LS+ D + K + T K++ N Sbjct: 1355 EGTLLTAKVLSIDPDKKHVELSLLPTDTGKPDVVPESAGFSKRKNKASKKTPTKRKRENL 1414 Query: 543 SNNAMAEAFKAAK 555 + K K Sbjct: 1415 EKGSQDTGLKKKK 1427 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 67/395 (16%), Positives = 126/395 (31%), Gaps = 39/395 (9%) Query: 158 KLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDG 216 K+ +++ V + S L L GM G VK D+ V L + G Sbjct: 46 KVSREKPKAVGLEKRTT-STKEIVEIPLYSKLSVGMLFLGCVKRTKDFELTVSLPYCLTG 104 Query: 217 LLHITDMAWKRVK----------------HPSEIVNVGDEITVKVLKFDRERT---RVSL 257 + T++ SE+ + G + + + + V L Sbjct: 105 YIQATNICDAYTNLISEQVEKDDPLEALVPLSELYSPGMLVRCAISSLETTASGFPSVKL 164 Query: 258 GLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE-EGVEGLVHVSEMDWTNKNI 316 + + G L+G V+++ D+G V+I G + + + Sbjct: 165 SVNPKHVN-KALNTGSIKTGMVLSGCVSSVEDHGYLVDIGVAGTKAFLPRQKAQLFLSQA 223 Query: 317 HPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN------PWQQFAETHNKGDRVEGK 370 ++ VG+ + +V ++ E + + L + Q G + + Sbjct: 224 GQGSLLRVGEYLNCVVEEVKNEGKIVRLSIIQNDVASALATVEQNWNLNNLLPGLVFKAQ 283 Query: 371 IKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERIS 430 I+ + I + G V G YK+G E+ A +L +D + I Sbjct: 284 IEKVMHNNITLSFLSSYTGFVDFLHFEPKKIGS-----YKEGQEVKACILWLDPSTKTIR 338 Query: 431 LGVKQLAEDPFNNWVALN--KKGAIVTGKVTA--VDAKGATVELADGVEGYLRASEASRD 486 L ++Q P N L G+++ V GA EL G G+ S Sbjct: 339 LTLRQCFLQPGNTLPQLTSDWVGSVLDNCVVQTLFKNAGAVFELEGGNLGFAFKHHLSAS 398 Query: 487 RVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRA 521 + G + + T + LS++ Sbjct: 399 KQPHF-EKFKKGTTHKGRITDFSPMDEMHILSLKE 432 >UniRef50_A1AM10 SSU ribosomal protein S1P n=10 Tax=Desulfuromonadales RepID=A1AM10_PELPD Length = 407 Score = 277 bits (708), Expect = 9e-73, Method: Composition-based stats. Identities = 118/341 (34%), Positives = 190/341 (55%), Gaps = 5/341 (1%) Query: 5 FAQLFEESLKEI--ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEI 62 FAQLFEES PG + V+ + + V +D G K E I ++F + +G + Sbjct: 20 FAQLFEESCSRKGGWLEPGQKLDVRVLKVSAEWVFIDCGQKGEGVIDRKEFLDQEGNCTV 79 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 + GD + + G A LE A++ V G + ++KGG+ + Sbjct: 80 KEGDSISAYFLSSRQGEMRFTTRLGGGAAGNA--QLEAAWQSGVPVEGQVEQEIKGGYQI 137 Query: 123 ELNG-IRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 L RAF P S + +R D L G L F++ + +K N+VVSRR ++E E Sbjct: 138 RLGSSTRAFCPFSQIALRRSDDHQSLVGSRLTFRITEYGEKGRNIVVSRRVLLEEEQQRM 197 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEI 241 R++ ++ EGM + G V +L D+GAFVD+GG++GL+ ++++ W RVK +E+++VG ++ Sbjct: 198 REEAWASISEGMTLDGTVSSLRDFGAFVDIGGLEGLVPLSEIGWSRVKDAAELLSVGQKV 257 Query: 242 TVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVE 301 V V D+ER R+SL +K+ DPW +A+++PEG+ +G V LT +G FV + G++ Sbjct: 258 QVVVKSLDQERNRISLSIKETLVDPWDQVAEQHPEGSFQSGTVARLTPFGAFVTLPCGLD 317 Query: 302 GLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRI 342 GL+H+S++ + HP +V++ G VEV V ID E RRI Sbjct: 318 GLIHISKLGGGKRISHPREVLSEGQAVEVKVEGIDRESRRI 358 Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats. Identities = 81/367 (22%), Positives = 152/367 (41%), Gaps = 17/367 (4%) Query: 156 VIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV- 214 + D +R + + L+ G ++ V ++ F+D G Sbjct: 2 IENSDLERTSEQEESEESFAQLFEESCSRKGGWLEPGQKLDVRVLKVSAEWVFIDCGQKG 61 Query: 215 DGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWV-AIAKR 273 +G++ + + + V GD I+ L + + + G + Sbjct: 62 EGVIDRKEFLD---QEGNCTVKEGDSISAYFLS--SRQGEMRFTTRLGGGAAGNAQLEAA 116 Query: 274 YPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVL 333 + G + G+V G + + S++ + H S VG + + Sbjct: 117 WQSGVPVEGQVEQEIKGGYQIRLGSSTRAFCPFSQIALRRSDDHQS---LVGSRLTFRIT 173 Query: 334 DIDEERRRISLGLKQCKANPWQQF----AETHNKGDRVEGKIKSITDFGIFIGLDGGIDG 389 + E+ R I + + Q+ + ++G ++G + S+ DFG F+ + GG++G Sbjct: 174 EYGEKGRNIVVSRRVLLEEEQQRMREEAWASISEGMTLDGTVSSLRDFGAFVDI-GGLEG 232 Query: 390 LVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNK 449 LV LS+I W+ ++A G ++ VV +D ER RISL +K+ DP++ + Sbjct: 233 LVPLSEIGWSRV-KDAAELLSVGQKVQVVVKSLDQERNRISLSIKETLVDPWDQVAEQHP 291 Query: 450 KGAIVTGKVTAVDAKGATVELADGVEGYLRASEA-SRDRVEDATLVLSVGDEVEAKFTGV 508 +G+ +G V + GA V L G++G + S+ R+ VLS G VE K G+ Sbjct: 292 EGSFQSGTVARLTPFGAFVTLPCGLDGLIHISKLGGGKRISHPREVLSEGQAVEVKVEGI 351 Query: 509 DRKNRAI 515 DR++R I Sbjct: 352 DRESRRI 358 >UniRef50_D1PP74 4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=8 Tax=Bacteria RepID=D1PP74_9FIRM Length = 639 Score = 276 bits (705), Expect = 2e-72, Method: Composition-based stats. Identities = 123/362 (33%), Positives = 195/362 (53%), Gaps = 14/362 (3%) Query: 1 MTES------FAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDA-GLKSESAIPAEQF 53 M+E F ++ S G IV+ V+++ +V G K + + Sbjct: 277 MSEEIRDDMSFEEMLAASEA-KPLYAGKIVKAKVISVSPTECVVGIDGSKHTGVVTLREM 335 Query: 54 K---NAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTG 110 NA+ E ++V DE+D+ + D G LSR + + + + +A E+ + G Sbjct: 336 SHDPNAKMEDLVKVDDELDLVVVKTNDQEGVDTLSRVRFEAQKGMKDVAEAAENGTVMEG 395 Query: 111 VINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSR 170 + KGG V + G+R F+P S +R D L G+ ++ + + +V S Sbjct: 396 DVMEANKGGVVVNVKGVRVFVPRSQATMRRDEDYTKLVGQHVKLVITEC--AGRKIVGSI 453 Query: 171 RAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKH 230 V N A+R++ N++ G + +G+VK+LT YGAFVD+GGVDGL HI++++W +KH Sbjct: 454 NKVTAEANKAKREEFWANVEVGKKYQGVVKSLTSYGAFVDIGGVDGLCHISELSWSNIKH 513 Query: 231 PSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDY 290 PSE+VNVGDEI V V +D E +VSLG K+ ++PWV + P GT+ T V ++T + Sbjct: 514 PSEVVNVGDEIEVYVKSYDPENQKVSLGYKKEEDNPWVKLENEVPVGTEFTAPVVSITKF 573 Query: 291 GCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCK 350 G FV I G++GLVH+SE+ + S V+ VGD V V + ++D +R+RISL +K C Sbjct: 574 GAFVRIMPGIDGLVHISEISNE-RVNKVSDVLKVGDEVRVKLTNVDFDRKRISLSMKACL 632 Query: 351 AN 352 Sbjct: 633 NE 634 Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats. Identities = 93/349 (26%), Positives = 162/349 (46%), Gaps = 15/349 (4%) Query: 189 LQEGMEVKGIVKNLTDYGAFVDLGG--VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVL 246 L G VK V +++ V + G G++ + +M+ ++V V DE+ + V+ Sbjct: 299 LYAGKIVKAKVISVSPTECVVGIDGSKHTGVVTLREMSHDPNAKMEDLVKVDDELDLVVV 358 Query: 247 KFDRERTRVSLGLKQLGEDPWV-AIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVH 305 K + + +L + + +A+ GT + G V G +GV V Sbjct: 359 KTNDQEGVDTLSRVRFEAQKGMKDVAEAAENGTVMEGDVMEANKGGVV-VNVKGVRVFVP 417 Query: 306 VSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPW----QQFAETH 361 S+ ++ +K+V G V++++ + R+I + + A ++F Sbjct: 418 RSQ-ATMRRDEDYTKLV--GQHVKLVITEC--AGRKIVGSINKVTAEANKAKREEFWANV 472 Query: 362 NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQ 421 G + +G +KS+T +G F+ + GG+DGL H+S++SW+ + GDEI V Sbjct: 473 EVGKKYQGVVKSLTSYGAFVDI-GGVDGLCHISELSWS-NIKHPSEVVNVGDEIEVYVKS 530 Query: 422 VDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRAS 481 D E +++SLG K+ ++P+ G T V ++ GA V + G++G + S Sbjct: 531 YDPENQKVSLGYKKEEDNPWVKLENEVPVGTEFTAPVVSITKFGAFVRIMPGIDGLVHIS 590 Query: 482 EASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDA 530 E S +RV + VL VGDEV K T VD + ISLS++A DE Sbjct: 591 EISNERVNKVSDVLKVGDEVRVKLTNVDFDRKRISLSMKACLNEDESAE 639 Score = 128 bits (321), Expect = 7e-28, Method: Composition-based stats. Identities = 54/293 (18%), Positives = 113/293 (38%), Gaps = 14/293 (4%) Query: 263 GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI-EEGVEGLVHVSEMDWTNKNIHPSKV 321 E + AK G + +V +++ C V I G+V + EM N + Sbjct: 288 EEMLAASEAKPLYAGKIVKAKVISVSPTECVVGIDGSKHTGVVTLREMSHD-PNAKMEDL 346 Query: 322 VNVGDVVEVMVLDIDEERRRISLGLKQCKANP-WQQFAETHNKGDRVEGKIKSITDFGIF 380 V V D ++++V+ +++ +L + +A + AE G +EG + Sbjct: 347 VKVDDELDLVVVKTNDQEGVDTLSRVRFEAQKGMKDVAEAAENGTVMEGDVMEANKG-GV 405 Query: 381 IGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGV----KQL 436 + G+ V S + + G + V+ + +I + + Sbjct: 406 VVNVKGVRVFVPRSQATMRRDEDYTK---LVGQHVKLVITEC--AGRKIVGSINKVTAEA 460 Query: 437 AEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLS 496 + + A + G G V ++ + GA V++ GV+G SE S ++ + V++ Sbjct: 461 NKAKREEFWANVEVGKKYQGVVKSLTSYGAFVDIG-GVDGLCHISELSWSNIKHPSEVVN 519 Query: 497 VGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAE 549 VGDE+E D +N+ +SL + +++ V + ++ + Sbjct: 520 VGDEIEVYVKSYDPENQKVSLGYKKEEDNPWVKLENEVPVGTEFTAPVVSITK 572 >UniRef50_D1CBU2 RNA binding S1 domain protein n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CBU2_THET1 Length = 431 Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats. Identities = 123/358 (34%), Positives = 201/358 (56%), Gaps = 19/358 (5%) Query: 5 FAQLFEESLKEI-ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK--NAQGELE 61 + + IV GVV+ D ++VD G KSE +PA + + + + Sbjct: 62 MEDILASGEADYRTLHRNEIVDGVVMGFDNGDLIVDVGGKSEGIVPASELTTLSEEEKES 121 Query: 62 IQVGDEVDVALD-AVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 ++ G + V++ A ED G +LS ++A+ W L++ E E V + G KGG Sbjct: 122 LEPGQPIVVSVLNASEDNEGRIVLSVDRARAERLWRELQQKLETGEIVDCKVVGYNKGGL 181 Query: 121 TVELNGIRAFLPGSLV-------DVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAV 173 V+L G+R F+P S + D + +L G+ L+ KVI++++KRN +++S R Sbjct: 182 LVDLGGLRGFIPSSQISFLVSSNDADRQSELANLVGRTLQAKVIEVNRKRNRLILSERIA 241 Query: 174 IESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSE 233 + +++L+E L+EG VKG V +L D+GAFVD+GG DGL+H+++++W R+ HPSE Sbjct: 242 TQERKETSKERLIEELREGQIVKGRVTSLADFGAFVDIGGADGLIHLSEISWGRINHPSE 301 Query: 234 IVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCF 293 ++ GDE+ V VL DRE +++L +K+ +PW +RY G + G VT + +G F Sbjct: 302 VLKPGDEVDVMVLNIDREHKKIALSMKRTQPEPWATAMERYDVGQIVEGEVTQIAPFGVF 361 Query: 294 VEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKA 351 V +E+G+EGLVH+SE+ T V VGD + + V+ +D +RRRI L ++Q Sbjct: 362 VRLEDGIEGLVHMSELGDTK--------VQVGDKLRLRVIKMDTQRRRIGLSVRQLDE 411 Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats. Identities = 91/362 (25%), Positives = 162/362 (44%), Gaps = 22/362 (6%) Query: 176 SENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSEI 234 + A + L V G+V + VD+GG +G++ +++ + + Sbjct: 63 EDILASGEADYRTLHRNEIVDGVVMGFDNGDLIVDVGGKSEGIVPASELTTLSEEEKESL 122 Query: 235 VNVGDEITVKVLKFDRER-TRVSLGL-KQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGC 292 G I V VL + R+ L + + E W + ++ G + +V G Sbjct: 123 -EPGQPIVVSVLNASEDNEGRIVLSVDRARAERLWRELQQKLETGEIVDCKVVGYNKGGL 181 Query: 293 FVEIEEGVEGLVHVSEMDWTNKNIHPSKVVN----VGDVVEVMVLDIDEERRRISLGLKQ 348 V++ + S++ + + + VG ++ V++++ +R R+ L + Sbjct: 182 LVDLGGLRG-FIPSSQISFLVSSNDADRQSELANLVGRTLQAKVIEVNRKRNRLILSERI 240 Query: 349 CKAN----PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEE 404 ++ E +G V+G++ S+ DFG F+ + GG DGL+HLS+ISW Sbjct: 241 ATQERKETSKERLIEELREGQIVKGRVTSLADFGAFVDI-GGADGLIHLSEISWGRIN-H 298 Query: 405 AVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAK 464 K GDE+ +VL +D E ++I+L +K+ +P+ + G IV G+VT + Sbjct: 299 PSEVLKPGDEVDVMVLNIDREHKKIALSMKRTQPEPWATAMERYDVGQIVEGEVTQIAPF 358 Query: 465 GATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDE 524 G V L DG+EG + SE +V VGD++ + +D + R I LSVR DE Sbjct: 359 GVFVRLEDGIEGLVHMSELGDTKV-------QVGDKLRLRVIKMDTQRRRIGLSVRQLDE 411 Query: 525 AD 526 D Sbjct: 412 PD 413 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 67/287 (23%), Positives = 127/287 (44%), Gaps = 14/287 (4%) Query: 272 KRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVM 331 + + G V + V++ EG+V SE+ ++ S G + V Sbjct: 74 RTLHRNEIVDGVVMGFDNGDLIVDVGGKSEGIVPASELTTLSEEEKESLE--PGQPIVVS 131 Query: 332 VLDIDEER-RRISLGLKQCKANP-WQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDG 389 VL+ E+ RI L + + +A W++ + G+ V+ K+ + GG+ G Sbjct: 132 VLNASEDNEGRIVLSVDRARAERLWRELQQKLETGEIVDCKVVGYNKG-GLLVDLGGLRG 190 Query: 390 LVHLSDISWNVAGEEAVREYK----KGDEIAAVVLQVDAERERISLGVKQ----LAEDPF 441 + S IS+ V+ +A R+ + G + A V++V+ +R R+ L + E Sbjct: 191 FIPSSQISFLVSSNDADRQSELANLVGRTLQAKVIEVNRKRNRLILSERIATQERKETSK 250 Query: 442 NNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEV 501 + ++G IV G+VT++ GA V++ G +G + SE S R+ + VL GDEV Sbjct: 251 ERLIEELREGQIVKGRVTSLADFGAFVDIG-GADGLIHLSEISWGRINHPSEVLKPGDEV 309 Query: 502 EAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMA 548 + +DR+++ I+LS++ A+ + + +A Sbjct: 310 DVMVLNIDREHKKIALSMKRTQPEPWATAMERYDVGQIVEGEVTQIA 356 >UniRef50_B4U6I5 RNA binding S1 domain protein n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U6I5_HYDS0 Length = 525 Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats. Identities = 127/562 (22%), Positives = 243/562 (43%), Gaps = 47/562 (8%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL 60 M F +L + ++ + GS+V+G VV I V +D G K E I + + Sbjct: 1 MVTEFEELLKA--QKEQFSTGSVVKGSVVKITDSNVYLDIGYKIEGVIRRYEVGD----- 53 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 +++G E++ + + LS + K + + +KA E + ++ K K GF Sbjct: 54 -VEIGQEIEAVIIKLRGIENPI-LSTKPLKSSKGFSIAKKALEQKTPIDVIVESKGKPGF 111 Query: 121 TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIK--LDQKRNNVVVSRRAVIESEN 178 V+L IRA +P G +++ V K + + V VS + E Sbjct: 112 FVQLEDIRALMPFGEAPRH------VNIGDKIKVLVTKATYENGKPMVNVSYKEYENIER 165 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTD-YGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVN 236 ++ + + +L+ G ++G V + G V L GV G + ++ + Sbjct: 166 HQKQLEFINSLEVGSTIEGKVIKVDPEKGITVLLKEGVRGFVPHYEIPKG------TNIK 219 Query: 237 VGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDY-GCFVE 295 D + V+V+K ++ + L L++ ++ W + EG K G+V+ G FVE Sbjct: 220 ENDTLEVRVIKKAKKGDFLILSLRKPKKNIWETL--ELKEGDKTEGKVSFYRKGKGLFVE 277 Query: 296 IEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQ 355 ++EG+ LV M +K++ G ++++V ID+++++I + + + NP Sbjct: 278 LQEGITALVPEESMKNIG-----NKLLKSGTKLKLVVTRIDKDKKQIDVNIVPSEENPAA 332 Query: 356 QFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEI 415 F +++ V+GK+K++ FI L ++G+V D+SW + + G+E Sbjct: 333 DFIKSNPPNTIVKGKVKTVHPNIAFIELGPNVEGIVKKQDMSW-LKNARSEELLTPGEEK 391 Query: 416 AAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVE 475 +VL +D +++ LG+KQL ++P++ K G V V V G + L +G++ Sbjct: 392 EFMVLGLD--GKKVKLGLKQLTQNPWSVIPERYKPGQQVELAVKEVRPFGTFLGLPEGID 449 Query: 476 GYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSV-----RAKDEADEKDA 530 G L SE ++ L G + K V+ K I+ S+ + + E ++ Sbjct: 450 GLLPISEIPKN------TNLEPGQNITVKVLEVNPKEEKITFSMIQETKKQQKEQGDQKE 503 Query: 531 IATVNKQEDANFSNNAMAEAFK 552 VN + + K Sbjct: 504 FIKVNDSSSGFKLGDILKNKLK 525 >UniRef50_A7G2Q4 Ribosomal protein S1 n=13 Tax=Clostridium RepID=A7G2Q4_CLOBH Length = 387 Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats. Identities = 123/366 (33%), Positives = 229/366 (62%), Gaps = 7/366 (1%) Query: 1 MTES--FAQLFEESLKEIE-TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ 57 M+E + EE ++ G +++G V+++ +++ G S+ +P ++ + + Sbjct: 1 MSEEITMKDMMEEINSSMKRIHKGELLKGKVISVSDKEAVLNIGYISDGILPKKEVVDNE 60 Query: 58 G---ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVING 114 + I D + V + V DG G LLS++KA+ EAW LEKA+++ E + + Sbjct: 61 EVNLKDIISKDDVISVCVLEVNDGEGNVLLSKKKAEIIEAWSKLEKAFKNEEILEIKVEE 120 Query: 115 KVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVI 174 +KGG + GIR F+P S +D + V+D +G+ ++ ++I+LD+++ +V+S R V Sbjct: 121 IIKGGAIGHIQGIRVFIPASQIDNKYVKDLNVFKGEMVKGRLIELDKQKRKIVLSSRVVK 180 Query: 175 ESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEI 234 E E + +++LL +L++G +++G+V+ L +GAFVD+GG+DGL+H + ++W RV HPSE+ Sbjct: 181 EEEEAKRKEELLNSLEKGQKIEGVVRRLEKFGAFVDIGGMDGLVHNSQLSWGRVNHPSEV 240 Query: 235 VNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFV 294 V++GD++ V VL FD++ +++L LK + +DPW + +Y G+ + G + L ++G FV Sbjct: 241 VSIGDKVEVYVLDFDKDTKKIALSLKDVKKDPWNTVKDKYAVGSVIEGTIVKLLNFGAFV 300 Query: 295 EIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPW 354 E+E G+EGLVH+SE+ + PS+ +N+GD V+V VL+++ + +R+SL +K+ P Sbjct: 301 EVENGIEGLVHISEITDEH-IAKPSEKLNIGDKVKVKVLEVNSDEKRMSLSIKEATEKPK 359 Query: 355 QQFAET 360 + F++ Sbjct: 360 EDFSKY 365 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 89/381 (23%), Positives = 186/381 (48%), Gaps = 12/381 (3%) Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSEIVNV 237 E + ++ + +G +KG V +++D A +++G + DG+L ++ + +I++ Sbjct: 11 MEEINSSMKRIHKGELLKGKVISVSDKEAVLNIGYISDGILPKKEVVDNEEVNLKDIISK 70 Query: 238 GDEITVKVLKFDRERTRVSLGLKQLGE-DPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI 296 D I+V VL+ + V L K+ + W + K + L +V + G I Sbjct: 71 DDVISVCVLEVNDGEGNVLLSKKKAEIIEAWSKLEKAFKNEEILEIKVEEIIKGGAIGHI 130 Query: 297 EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQ 356 + G+ + S++ + V G++V+ ++++D+++R+I L + K + Sbjct: 131 Q-GIRVFIPASQI-DNKYVKDLN--VFKGEMVKGRLIELDKQKRKIVLSSRVVKEEEEAK 186 Query: 357 FA----ETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKG 412 + KG ++EG ++ + FG F+ + GG+DGLVH S +SW G Sbjct: 187 RKEELLNSLEKGQKIEGVVRRLEKFGAFVDI-GGMDGLVHNSQLSWGRVN-HPSEVVSIG 244 Query: 413 DEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELAD 472 D++ VL D + ++I+L +K + +DP+N G+++ G + + GA VE+ + Sbjct: 245 DKVEVYVLDFDKDTKKIALSLKDVKKDPWNTVKDKYAVGSVIEGTIVKLLNFGAFVEVEN 304 Query: 473 GVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIA 532 G+EG + SE + + + + L++GD+V+ K V+ + +SLS++ E ++D Sbjct: 305 GIEGLVHISEITDEHIAKPSEKLNIGDKVKVKVLEVNSDEKRMSLSIKEATEKPKEDFSK 364 Query: 533 TVNKQEDANFSNNAMAEAFKA 553 + +E+ + + FK Sbjct: 365 YDDSKEEDVTLGDLFGDKFKD 385 >UniRef50_B0KVD5 30S ribosomal protein S1 n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVD5_9BACT Length = 414 Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats. Identities = 113/362 (31%), Positives = 195/362 (53%), Gaps = 26/362 (7%) Query: 8 LFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE-LEIQVGD 66 L ++ L+ + R G +V GVVV + + +LVD G KSE I + A IQVG+ Sbjct: 18 LTDKDLQMKQFRLGDMVEGVVVNVSHEEILVDIGAKSEGIITRLELSEADKSYKNIQVGE 77 Query: 67 EVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNG 126 ++ + E+ G +LS +KA++ + W E+A+E + + KGG + G Sbjct: 78 KITAKVVQTENAQGYVVLSLKKAEKDKKWQDAEEAFEKGLIIDATVIEYNKGGLLCDSLG 137 Query: 127 IRAFLPGSLVD----------------VRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSR 170 +R F+P S +D L GK L KVI++D+++N V+S Sbjct: 138 LRGFIPLSHLDRVHFANDVAKFAAGSEAELKESLKILSGKTLRVKVIEIDKEKNRFVLSE 197 Query: 171 RAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKH 230 + + + + R + L ++ G V+GIV + +G FVDL GV+GL+HI+++AW++V H Sbjct: 198 KDALATYSEESRKKRLSEIKIGSTVEGIVTGIMPFGVFVDLDGVEGLVHISEIAWEKVSH 257 Query: 231 PSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDY 290 PS VG +I V VL D E +++L +K+L +PW + ++YP GTK+TG V+ + + Sbjct: 258 PSNYFKVGQKIKVMVLGVDEESNKLALSVKKLIPNPWETVEEKYPVGTKVTGVVSKIVPF 317 Query: 291 GCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCK 350 G FV +E+G++GL+H+SE + G+ V +V+ +D E ++++L ++ Sbjct: 318 GAFVTLEKGLDGLIHISE---------AEAPLKEGETVSAVVIQVDGENQKLALSTREHN 368 Query: 351 AN 352 + Sbjct: 369 FD 370 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 99/391 (25%), Positives = 181/391 (46%), Gaps = 32/391 (8%) Query: 168 VSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWK 226 + ++ S+ ++D ++ + G V+G+V N++ VD+G +G++ +++ Sbjct: 7 IQKKESAMSKYLTDKDLQMKQFRLGDMVEGVVVNVSHEEILVDIGAKSEGIITRLELSEA 66 Query: 227 RVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLG-EDPWVAIAKRYPEGTKLTGRVT 285 + + VG++IT KV++ + + V L LK+ + W + + +G + V Sbjct: 67 --DKSYKNIQVGEKITAKVVQTENAQGYVVLSLKKAEKDKKWQDAEEAFEKGLIIDATVI 124 Query: 286 NLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKV-----------VNV--GDVVEVMV 332 G + G+ G + +S +D + +K + + G + V V Sbjct: 125 EYNKGGLLCD-SLGLRGFIPLSHLDRVHFANDVAKFAAGSEAELKESLKILSGKTLRVKV 183 Query: 333 LDIDEERRRISLG----LKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGID 388 ++ID+E+ R L L ++ G VEG + I FG+F+ LD G++ Sbjct: 184 IEIDKEKNRFVLSEKDALATYSEESRKKRLSEIKIGSTVEGIVTGIMPFGVFVDLD-GVE 242 Query: 389 GLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALN 448 GLVH+S+I+W +K G +I +VL VD E +++L VK+L +P+ Sbjct: 243 GLVHISEIAWEKVS-HPSNYFKVGQKIKVMVLGVDEESNKLALSVKKLIPNPWETVEEKY 301 Query: 449 KKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGV 508 G VTG V+ + GA V L G++G + SE A L G+ V A V Sbjct: 302 PVGTKVTGVVSKIVPFGAFVTLEKGLDGLIHISE--------AEAPLKEGETVSAVVIQV 353 Query: 509 DRKNRAISLSVRAKDEADEKDAIATVNKQED 539 D +N+ ++LS R + +EKD + +K +D Sbjct: 354 DGENQKLALSTREHNFDNEKDKVKEKSKDKD 384 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 91/366 (24%), Positives = 166/366 (45%), Gaps = 33/366 (9%) Query: 88 KAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRPVRDTLH 146 +K K + + V GV+ V++ + + Sbjct: 14 MSKYLTDKDLQMKQFRLGDMVEGVVVNVSHEEILVDIGAKSEGIITRLELSEADKSYKNI 73 Query: 147 LEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYG 206 G+++ KV++ + + VV+S + + + + ++ E G+ + V G Sbjct: 74 QVGEKITAKVVQTENAQGYVVLSLKKAEKDKKWQDAEEAFEK---GLIIDATVIEYNKGG 130 Query: 207 AFVDLGGVDGLLHITDMAWKRVKH------------PSEIVNV--GDEITVKVLKFDRER 252 D G+ G + ++ + + E + + G + VKV++ D+E+ Sbjct: 131 LLCDSLGLRGFIPLSHLDRVHFANDVAKFAAGSEAELKESLKILSGKTLRVKVIEIDKEK 190 Query: 253 TRVSLGLKQLG----EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSE 308 R L K E+ G+ + G VT + +G FV++ +GVEGLVH+SE Sbjct: 191 NRFVLSEKDALATYSEESRKKRLSEIKIGSTVEGIVTGIMPFGVFVDL-DGVEGLVHISE 249 Query: 309 MDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVE 368 + W K HPS VG ++VMVL +DEE +++L +K+ NPW+ E + G +V Sbjct: 250 IAWE-KVSHPSNYFKVGQKIKVMVLGVDEESNKLALSVKKLIPNPWETVEEKYPVGTKVT 308 Query: 369 GKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERER 428 G + I FG F+ L+ G+DGL+H+S+ A K+G+ ++AVV+QVD E ++ Sbjct: 309 GVVSKIVPFGAFVTLEKGLDGLIHISE---------AEAPLKEGETVSAVVIQVDGENQK 359 Query: 429 ISLGVK 434 ++L + Sbjct: 360 LALSTR 365 >UniRef50_C4V2L6 Possible 30S ribosomal protein S1 n=2 Tax=Selenomonas RepID=C4V2L6_9FIRM Length = 370 Score = 271 bits (692), Expect = 7e-71, Method: Composition-based stats. Identities = 123/360 (34%), Positives = 205/360 (56%), Gaps = 5/360 (1%) Query: 6 AQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL---EI 62 + E + + ++V+GVVV + +D VD G K E + + + Sbjct: 1 MKELLEQEDMPDIQERTVVKGVVVQVSRDEAYVDIGYKQEIPVSKRDLAVPAPDDARDVV 60 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 +VGDE+DV + ++ G LS+ +A + AW +E E ETV + +VKGG Sbjct: 61 KVGDEIDVYIKSLGGDNGG-SLSKVEADKMAAWKDIEVIKEKGETVEAKVAKEVKGGLVA 119 Query: 123 ELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 + G+R F+P S +++ V+D + +E ++I++D ++ +V+SRR ++E + + + Sbjct: 120 YVMGLRGFIPASQMELHFVKDLSVYVDQTVEAEIIEIDVQKRRLVLSRRKLLERDRAEKE 179 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 + + ++ V+G VK L DYGAF+D+GGVDGL HI+D+AW RVKHPSE++ VG E+ Sbjct: 180 EAVFSAIEPEQIVRGTVKRLVDYGAFIDIGGVDGLAHISDLAWHRVKHPSEVLEVGQELD 239 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 V V DR+ R+SL +K DPW+ A++Y EG + G++ LTD+G F+EIE G +G Sbjct: 240 VYVKSVDRDTKRISLSVKDTLPDPWIEKAEKYAEGDFIEGKIIKLTDFGAFMEIEPGFDG 299 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHN 362 L+ + E+ + + V+ GD+V V VL ID +R+RISL + + K + + + Sbjct: 300 LIPMGELA-EKRIERADEAVHTGDIVIVKVLRIDTKRKRISLSITKAKRDADSADIKKYE 358 Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats. Identities = 85/335 (25%), Positives = 143/335 (42%), Gaps = 13/335 (3%) Query: 207 AFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGED 265 A+VD+G + + D+A ++V VGDEI V + + SL + + Sbjct: 31 AYVDIGYKQEIPVSKRDLAVPAPDDARDVVKVGDEIDVYIKSLGGDNGG-SLSKVEADKM 89 Query: 266 PWVAIAKRYPE-GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNV 324 + E G + +V G + G+ G + S+M + S V V Sbjct: 90 AAWKDIEVIKEKGETVEAKVAKEVKGGLVAYVM-GLRGFIPASQM-ELHFVKDLS--VYV 145 Query: 325 GDVVEVMVLDIDEERRRISLGLKQCKA----NPWQQFAETHNKGDRVEGKIKSITDFGIF 380 VE +++ID ++RR+ L ++ + V G +K + D+G F Sbjct: 146 DQTVEAEIIEIDVQKRRLVLSRRKLLERDRAEKEEAVFSAIEPEQIVRGTVKRLVDYGAF 205 Query: 381 IGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDP 440 I + GG+DGL H+SD++W+ + + G E+ V VD + +RISL VK DP Sbjct: 206 IDI-GGVDGLAHISDLAWHRV-KHPSEVLEVGQELDVYVKSVDRDTKRISLSVKDTLPDP 263 Query: 441 FNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDE 500 + +G + GK+ + GA +E+ G +G + E + R+E A + GD Sbjct: 264 WIEKAEKYAEGDFIEGKIIKLTDFGAFMEIEPGFDGLIPMGELAEKRIERADEAVHTGDI 323 Query: 501 VEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVN 535 V K +D K + ISLS+ + I Sbjct: 324 VIVKVLRIDTKRKRISLSITKAKRDADSADIKKYE 358 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 52/263 (19%), Positives = 104/263 (39%), Gaps = 12/263 (4%) Query: 292 CFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKA 351 +V+I E V ++ + VV VGD ++V + + + SL + Sbjct: 31 AYVDIGYKQEIPVSKRDLAVPAPD-DARDVVKVGDEIDVYIKSLGGDNGG-SLSKVEADK 88 Query: 352 NPWQQFAETHNK-GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYK 410 + E + G+ VE K+ G+ + G+ G + S + + + + Sbjct: 89 MAAWKDIEVIKEKGETVEAKVAKEVKGGL-VAYVMGLRGFIPASQMELHFVKDLS---VY 144 Query: 411 KGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALN----KKGAIVTGKVTAVDAKGA 466 + A ++++D ++ R+ L ++L E + IV G V + GA Sbjct: 145 VDQTVEAEIIEIDVQKRRLVLSRRKLLERDRAEKEEAVFSAIEPEQIVRGTVKRLVDYGA 204 Query: 467 TVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEAD 526 +++ GV+G S+ + RV+ + VL VG E++ VDR + ISLSV+ Sbjct: 205 FIDIG-GVDGLAHISDLAWHRVKHPSEVLEVGQELDVYVKSVDRDTKRISLSVKDTLPDP 263 Query: 527 EKDAIATVNKQEDANFSNNAMAE 549 + + + + + Sbjct: 264 WIEKAEKYAEGDFIEGKIIKLTD 286 >UniRef50_UPI00016C5864 30S ribosomal protein S1 n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C5864 Length = 546 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 106/319 (33%), Positives = 178/319 (55%), Gaps = 13/319 (4%) Query: 34 DVVLVDA-GLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRH 92 + V V+ G +S+ +P +QF+ + VG+ VD +D + G +L+RE A + Sbjct: 187 NDVFVEVPGGRSQGLLPLQQFEGRRP----AVGESVDFDIDHYDSANGLLILTREGAAQV 242 Query: 93 -EAWITLEKAYEDAETVTGVINGKVKG--GFTVELNGIRAFLPGSLVDVRPVRDTLHLEG 149 W + V + G K G T+E+ GI+ FLP S +D+ V + G Sbjct: 243 VHDWTQV----TYGMVVEAKVTGTNKNKTGLTIEVAGIKGFLPASQLDLYRVENVDQFVG 298 Query: 150 KELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFV 209 + L+ V +++ + N++VSRRAV+E E + ++ +++ KGIV+++ +GAFV Sbjct: 299 QRLKVMVSEVNPEERNLIVSRRAVLEREKQVKAEEFWRTVEKDQVRKGIVRSVKPFGAFV 358 Query: 210 DLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVA 269 DLGG DGL+ +++ +W+RV +E+V +G E+ VK+ K D E ++ L ++ L P+ Sbjct: 359 DLGGADGLIPVSEFSWQRVNDLNEVVKIGQEVEVKISKIDFEARKIGLSMRALTTSPFEE 418 Query: 270 IAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVE 329 K G ++TG+V+ L D+G FVE+ G+EGL+HVSE+ T + S V+ G V Sbjct: 419 FTKTTQAGARVTGKVSRLADFGAFVELAPGLEGLIHVSELS-TQRVRRVSDVIEPGQNVI 477 Query: 330 VMVLDIDEERRRISLGLKQ 348 V +L D +RI+L LK+ Sbjct: 478 VEILSTDPVTKRIALSLKK 496 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 82/324 (25%), Positives = 144/324 (44%), Gaps = 23/324 (7%) Query: 207 AFVDLGGVD--GLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGE 264 FV++ G GLL + +R VG+ + + +D + L + + Sbjct: 189 VFVEVPGGRSQGLLPLQQFEGRRPA-------VGESVDFDIDHYDSANGLLILTREGAAQ 241 Query: 265 DPWVAIAKRYPEGTKLTGRVTNLTDY--GCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVV 322 Y G + +VT G +E+ G++G + S++ + + + V Sbjct: 242 VVHDWTQVTY--GMVVEAKVTGTNKNKTGLTIEVA-GIKGFLPASQL-DLYRVENVDQFV 297 Query: 323 NVGDVVEVMVLDIDEERRRISLGLKQCKANPW----QQFAETHNKGDRVEGKIKSITDFG 378 G ++VMV +++ E R + + + ++F T K +G ++S+ FG Sbjct: 298 --GQRLKVMVSEVNPEERNLIVSRRAVLEREKQVKAEEFWRTVEKDQVRKGIVRSVKPFG 355 Query: 379 IFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAE 438 F+ L GG DGL+ +S+ SW + K G E+ + ++D E +I L ++ L Sbjct: 356 AFVDL-GGADGLIPVSEFSWQRVN-DLNEVVKIGQEVEVKISKIDFEARKIGLSMRALTT 413 Query: 439 DPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVG 498 PF + + GA VTGKV+ + GA VELA G+EG + SE S RV + V+ G Sbjct: 414 SPFEEFTKTTQAGARVTGKVSRLADFGAFVELAPGLEGLIHVSELSTQRVRRVSDVIEPG 473 Query: 499 DEVEAKFTGVDRKNRAISLSVRAK 522 V + D + I+LS++ Sbjct: 474 QNVIVEILSTDPVTKRIALSLKKI 497 Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats. Identities = 64/255 (25%), Positives = 121/255 (47%), Gaps = 14/255 (5%) Query: 17 ETRPGSIVRGVVVAIDKD--VVLVDAGLKSESAIPAEQFKNAQGELEIQ-VGDEVDVALD 73 + G +V V +K+ + ++ + +PA Q + E Q VG + V + Sbjct: 248 QVTYGMVVEAKVTGTNKNKTGLTIEV-AGIKGFLPASQLDLYRVENVDQFVGQRLKVMVS 306 Query: 74 AVEDGFGETLLSREKAKRHEAWITLEKAY---EDAETVTGVINGKVKGGFTVELNGIRAF 130 V ++SR E + E+ + E + G++ G V+L G Sbjct: 307 EVNPEERNLIVSRRAVLEREKQVKAEEFWRTVEKDQVRKGIVRSVKPFGAFVDLGGADGL 366 Query: 131 LPGSLVDVRPVRDTLHLE--GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLEN 188 +P S + V D + G+E+E K+ K+D + + +S RA+ S ++ + Sbjct: 367 IPVSEFSWQRVNDLNEVVKIGQEVEVKISKIDFEARKIGLSMRALTTSP----FEEFTKT 422 Query: 189 LQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLK 247 Q G V G V L D+GAFV+L G++GL+H+++++ +RV+ S+++ G + V++L Sbjct: 423 TQAGARVTGKVSRLADFGAFVELAPGLEGLIHVSELSTQRVRRVSDVIEPGQNVIVEILS 482 Query: 248 FDRERTRVSLGLKQL 262 D R++L LK++ Sbjct: 483 TDPVTKRIALSLKKI 497 Score = 158 bits (401), Expect = 4e-37, Method: Composition-based stats. Identities = 59/265 (22%), Positives = 105/265 (39%), Gaps = 22/265 (8%) Query: 292 CFVEIEEGV-EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCK 350 FVE+ G +GL+ + + + VG+ V+ + D + L + Sbjct: 189 VFVEVPGGRSQGLLPLQQFEGRRP--------AVGESVDFDIDHYDSANGLLILTREGAA 240 Query: 351 ANPWQQFAETHNKGDRVEGKIK--SITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVRE 408 T+ G VE K+ + G+ I + GI G + S + E + Sbjct: 241 QVVHDWTQVTY--GMVVEAKVTGTNKNKTGLTIEVA-GIKGFLPASQL-DLYRVENVDQF 296 Query: 409 YKKGDEIAAVVLQVDAERERISLGVKQLAEDPFN----NWVALNKKGAIVTGKVTAVDAK 464 G + +V +V+ E + + + + E + +K + G V +V Sbjct: 297 --VGQRLKVMVSEVNPEERNLIVSRRAVLEREKQVKAEEFWRTVEKDQVRKGIVRSVKPF 354 Query: 465 GATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDE 524 GA V+L G +G + SE S RV D V+ +G EVE K + +D + R I LS+RA Sbjct: 355 GAFVDLG-GADGLIPVSEFSWQRVNDLNEVVKIGQEVEVKISKIDFEARKIGLSMRALTT 413 Query: 525 ADEKDAIATVNKQEDANFSNNAMAE 549 + ++ T + +A+ Sbjct: 414 SPFEEFTKTTQAGARVTGKVSRLAD 438 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 29/174 (16%), Positives = 66/174 (37%), Gaps = 8/174 (4%) Query: 6 AQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE---I 62 + + + +G+V ++ VD G ++ IP +F + + Sbjct: 326 EKQVKAEEFWRTVEKDQVRKGIVRSVKPFGAFVDLGG-ADGLIPVSEFSWQRVNDLNEVV 384 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 ++G EV+V + ++ + LS + K + VTG ++ G V Sbjct: 385 KIGQEVEVKISKIDFEARKIGLSMRALTTSP-FEEFTKTTQAGARVTGKVSRLADFGAFV 443 Query: 123 ELN-GIRAFLPGSLVDVRPVRDTLHLE--GKELEFKVIKLDQKRNNVVVSRRAV 173 EL G+ + S + + VR + G+ + +++ D + +S + + Sbjct: 444 ELAPGLEGLIHVSELSTQRVRRVSDVIEPGQNVIVEILSTDPVTKRIALSLKKI 497 Score = 75.4 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 35/177 (19%), Positives = 69/177 (38%), Gaps = 16/177 (9%) Query: 379 IFIGLDGGI-DGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLA 437 +F+ + GG GL+ L G+ + + D+ + L Sbjct: 189 VFVEVPGGRSQGLLPLQQFEGRRPA--------VGESVDFDIDHYDSANGLLILTR--EG 238 Query: 438 EDPFNNWVALNKKGAIVTGKVT--AVDAKGATVELADGVEGYLRASEASRDRVEDATLVL 495 + G +V KVT + G T+E+A G++G+L AS+ RVE+ Sbjct: 239 AAQVVHDWTQVTYGMVVEAKVTGTNKNKTGLTIEVA-GIKGFLPASQLDLYRVENVDQF- 296 Query: 496 SVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFK 552 VG ++ + V+ + R + +S RA E +++ + + + + + K Sbjct: 297 -VGQRLKVMVSEVNPEERNLIVSRRAVLEREKQVKAEEFWRTVEKDQVRKGIVRSVK 352 >UniRef50_A9SPX0 Predicted protein n=2 Tax=cellular organisms RepID=A9SPX0_PHYPA Length = 1785 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 107/548 (19%), Positives = 202/548 (36%), Gaps = 41/548 (7%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQG-- 58 M + FA L E L PG++V V ++ K+ +L+ + ++ Sbjct: 179 MVKEFAGLTVELLT-----PGAMVNARVRSVLKNGLLLSFLTYFTGTVDIFHLEDPLPGA 233 Query: 59 --ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKV 116 + + + ++ L+ + ++ + + + I +V Sbjct: 234 DWNTKYSENQRLKARILYIDPVAKTIGLTLNPQLLNNVLPSM--SVDVGDVFKDAIVRRV 291 Query: 117 KG--GFTVEL----NGIRAFLPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVV 168 G +EL N + ++ S V + GK++ +VI + Sbjct: 292 DATIGMLLELPTKENVVAGYI--SSVSDEHIAKLEKKYTVGKKVRARVIGHRVMDALAIA 349 Query: 169 SRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKR 227 S + + + ++Q M V G V + YGA V L GV L + M+ + Sbjct: 350 SLKESVVDQLLLSH----ADVQPAMNVTGTVIAVEPYGALVQLAEGVKALCPLQHMSEFQ 405 Query: 228 VKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYP---EGTKLTGRV 284 +PS VG ++ +VL D +++L K+ ++ Y EG G + Sbjct: 406 RSNPSSKFQVGSKLKFRVLSCDHHAKKITLTHKKTLITSKLSPIVSYESAVEGLVTHGFI 465 Query: 285 TNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISL 344 T + D GCFV V+GLVH S + V VG ++ VL D RR+SL Sbjct: 466 TGIEDIGCFVSFYNDVKGLVHKSALGIEAGV-KAENVFQVGQSIKCRVLRSDPAARRLSL 524 Query: 345 GL--KQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLD---GGIDGLVHLSDISWN 399 + + + A G V G + + D I + + G + G + +S Sbjct: 525 SFITTSSRDDASEGAAGDELIGKVVAGTVHHVNDSVIIVNVSTPTGLVKGYLTFPHLSDT 584 Query: 400 V-AGEEAVREYKKG-DEIAAVVLQVDAERERISLGVKQLAEDPF---NNWVALNKKGAIV 454 + E+ K G +VL V +++++ + KQ + ++ + +++ Sbjct: 585 LGHIEQLKSVTKVGFQFDRLLVLDV-TDKQKLIVSAKQSLLQAASSLPSDISQLQPQSVI 643 Query: 455 TGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRA 514 G V + +G V + G + + + V D + SVG V A+ V Sbjct: 644 PGYVANITDRGCFVRFLGRLTGLASVPQVADEFVSDPSNHFSVGQSVRAQVLEVYHDTGK 703 Query: 515 ISLSVRAK 522 SL ++ Sbjct: 704 FSLCLKQS 711 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 86/534 (16%), Positives = 171/534 (32%), Gaps = 46/534 (8%) Query: 22 SIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE------LEIQVGDEVDVALDAV 75 + G V I+ +++ + AE+ VG V + + Sbjct: 1 MKIWGAVAEINNKDMVISLPGGLRGFVLAEEASEVFENEVPLLSDLFSVGQLVACTVRKL 60 Query: 76 E----------------DGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGG 119 E + + + +A + + +T V+ G Sbjct: 61 ELTQEKKGRGKPEKEGKNEKRGRRIELSLKLGYLYDGLSIEAVYEGQALTAVVTSIEDHG 120 Query: 120 FTVELN--GIRAF-LPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIES 176 + + + F L + +D G+ ++ VI +D+KR V + + S Sbjct: 121 YLLSFGVPAVSGFLLHRNYLDGTS----KLRTGQLVQGVVISVDKKRGAVGLKADLGLIS 176 Query: 177 ENSAERDQ--LLENLQEGMEVKGIVKNLTDYGAFVD-LGGVDGLLHITDMAWKRVK-HPS 232 N + +E L G V V+++ G + L G + I + + Sbjct: 177 SNMVKEFAGLTVELLTPGAMVNARVRSVLKNGLLLSFLTYFTGTVDIFHLEDPLPGADWN 236 Query: 233 EIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTD--Y 290 + + ++L D + L L V + G + D Sbjct: 237 TKYSENQRLKARILYIDPVAKTIGLTL-NPQLLNNVLPSMSVDVGDVFKDAIVRRVDATI 295 Query: 291 GCFVEI---EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLK 347 G +E+ E V G + S + + K VG V V+ LK Sbjct: 296 GMLLELPTKENVVAGYI--SSVSDEH-IAKLEKKYTVGKKVRARVIGHRVMDALAIASLK 352 Query: 348 QCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVR 407 + + V G + ++ +G + L G+ L L +S Sbjct: 353 ESVVDQLLLSHADVQPAMNVTGTVIAVEPYGALVQLAEGVKALCPLQHMS-EFQRSNPSS 411 Query: 408 EYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNK---KGAIVTGKVTAVDAK 464 +++ G ++ VL D ++I+L K+ + + + +G + G +T ++ Sbjct: 412 KFQVGSKLKFRVLSCDHHAKKITLTHKKTLITSKLSPIVSYESAVEGLVTHGFITGIEDI 471 Query: 465 GATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLS 518 G V + V+G + S + A V VG ++ + D R +SLS Sbjct: 472 GCFVSFYNDVKGLVHKSALGIEAGVKAENVFQVGQSIKCRVLRSDPAARRLSLS 525 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 97/571 (16%), Positives = 197/571 (34%), Gaps = 47/571 (8%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLK-SESAIPAEQFKNAQGELEIQVGDEVD 69 + L G + VV +I+ L+ G+ + + + G +++ G V Sbjct: 96 DGLSIEAVYEGQALTAVVTSIEDHGYLLSFGVPAVSGFLLHRNYLD--GTSKLRTGQLVQ 153 Query: 70 VALDAVEDGFGETLLS-----REKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF---- 120 + +V+ G L E + V + +K G Sbjct: 154 GVVISVDKKRGAVGLKADLGLISSNMVKEFAGLTVELLTPGAMVNARVRSVLKNGLLLSF 213 Query: 121 ------TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVI 174 TV++ + LPG+ + + + + L+ +++ +D + ++ + Sbjct: 214 LTYFTGTVDIFHLEDPLPGADWNTKYSEN------QRLKARILYIDPVAKTIGLTLNPQL 267 Query: 175 ESENSAERDQLLENLQEGMEV-KGIVKNLTDY-GAFVDLGGVDGLL--HITDMAWKRVKH 230 ++ G IV+ + G ++L + ++ +I+ ++ + + Sbjct: 268 -----LNNVLPSMSVDVGDVFKDAIVRRVDATIGMLLELPTKENVVAGYISSVSDEHIAK 322 Query: 231 PSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDY 290 + VG ++ +V+ LK+ D + +TG V + Y Sbjct: 323 LEKKYTVGKKVRARVIGHRVMDALAIASLKESVVDQLLLSHADVQPAMNVTGTVIAVEPY 382 Query: 291 GCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCK 350 G V++ EGV+ L + M + +PS VG ++ VL D ++I+L K+ Sbjct: 383 GALVQLAEGVKALCPLQHMSEFQR-SNPSSKFQVGSKLKFRVLSCDHHAKKITLTHKKTL 441 Query: 351 ANPWQQFAETHN---KGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVR 407 ++ +G G I I D G F+ + GLVH S + + A Sbjct: 442 ITSKLSPIVSYESAVEGLVTHGFITGIEDIGCFVSFYNDVKGLVHKSALGIEAGVK-AEN 500 Query: 408 EYKKGDEIAAVVLQVDAERERISLG--VKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKG 465 ++ G I VL+ D R+SL +D G +V G V V+ Sbjct: 501 VFQVGQSIKCRVLRSDPAARRLSLSFITTSSRDDASEGAAGDELIGKVVAGTVHHVNDSV 560 Query: 466 ATVELA---DGVEGYLRASEASR--DRVEDATLVLSVG-DEVEAKFTGVDRKNRAISLSV 519 V ++ V+GYL S +E V VG V + + +S Sbjct: 561 IIVNVSTPTGLVKGYLTFPHLSDTLGHIEQLKSVTKVGFQFDRLLVLDV-TDKQKLIVSA 619 Query: 520 RAKDEADEKDAIATVNKQEDANFSNNAMAEA 550 + + +++ + + +A Sbjct: 620 KQSLLQAASSLPSDISQLQPQSVIPGYVANI 650 Score = 191 bits (485), Expect = 8e-47, Method: Composition-based stats. Identities = 98/600 (16%), Positives = 199/600 (33%), Gaps = 80/600 (13%) Query: 12 SLKEIETRPGSIVRGVVVAIDKDVVLVDAG--LKSESAIPAEQFKNAQGE--LEIQVGDE 67 S + V V+ + +++ + A + + + + G Sbjct: 834 SHPVMALELHQKVSAVIELVKDAYLVLSLPEQGNAIGFAAAGDYNSRRQDSHQRYSPGQR 893 Query: 68 VDVALDAVEDG-FGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNG 126 V ++ + D G +L + + + +I G V+ Sbjct: 894 VVATVEHLGDETNGNRMLLLLSNTGDSVEVKTSNTKKPRRELDKLI------GAIVDAEI 947 Query: 127 IRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERD--- 183 I F + G+++ +V++ + + + R + + Sbjct: 948 IDGF-------EEKNPLSSFNIGQKVRCRVVQRVRLQKSPGRKERTSVLELSLRPSQLSG 1000 Query: 184 -------QLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKR--VKHPSE 233 LE L G + V+ + D A++ + + G L I D + ++ +E Sbjct: 1001 YTRPGSLPSLEELVPGQCITAYVQEVKDDWAWLSVAPHLRGRLFILDSSTDPSELEKFAE 1060 Query: 234 IVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYP------------------ 275 VG ++ V D E+ + +Q + ++ P Sbjct: 1061 RFTVGTPVSCCVKSVDYEKRTLDFIRRQPPQLQEKSLFDVPPMEDADSSSENNTKQVFWI 1120 Query: 276 -EGTKLTGRVTNLTDY--GCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMV 332 +G L GRV + G V+I G VHV+ + K+ +P+ G V +V Sbjct: 1121 QKGDSLGGRVKQVNPGVGGISVQIAPSSFGRVHVTHLSDEWKD-NPASAFKEGQFVRCVV 1179 Query: 333 LD----------IDEERRRISLGLKQCKANPWQQFAETHNKGD---------RVEGKIKS 373 L ID R+ G+ K ++G +KS Sbjct: 1180 LGVEKNPNGKTVIDLTLRKSLGGMVAANLQASDSATTRCVKFQCRTIKPLCLVLQGFVKS 1239 Query: 374 ITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGV 433 + G FI L +D +V ++S ++ + G I ++ +DA+ R+ + + Sbjct: 1240 TSKKGCFISLAPQVDAIVLTCNLS-KAFVKDPAESFPPGKLIKGRIINIDADLGRVEMSL 1298 Query: 434 KQLAEDP------FNNWVALNKKGAIVTGKVTAVDAKGATVELADG-VEGYLRASEASRD 486 K + K+G +V G + ++ G V + V SE + Sbjct: 1299 KTSGQKKELTSTLLGRRFGDFKEGEVVFGTIKRIEKFGIFVTIEQSSVVTMCHMSEVADH 1358 Query: 487 RVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNA 546 +D VGD V A+ VD + ISL ++ ++ + + V +++D +N Sbjct: 1359 YFKDIDKHYKVGDRVRARVLKVDNTKQRISLGLKESYFSNTETHVQPVTEEDDMKVTNEE 1418 Score = 158 bits (400), Expect = 5e-37, Method: Composition-based stats. Identities = 76/474 (16%), Positives = 162/474 (34%), Gaps = 41/474 (8%) Query: 106 ETVTGVINGKVKGGFTVEL-NGIRAFLPGSLVDVRPVRDTLHL-----EGKELEFKV--I 157 + G + + L G+R F+ + L G+ + V + Sbjct: 1 MKIWGAVAEINNKDMVISLPGGLRGFVLAEEASEVFENEVPLLSDLFSVGQLVACTVRKL 60 Query: 158 KLDQKRNNVVVSRRAVIESENSAERDQLL-----------ENLQEGMEVKGIVKNLTDYG 206 +L Q++ + + + L E + EG + +V ++ D+G Sbjct: 61 ELTQEKKGRGKPEKEGKNEKRGRRIELSLKLGYLYDGLSIEAVYEGQALTAVVTSIEDHG 120 Query: 207 AFVDLG--GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGE 264 + G V G + + + + G + V+ D++R V L K Sbjct: 121 YLLSFGVPAVSGF-----LLHRNYLDGTSKLRTGQLVQGVVISVDKKRGAVGL--KADLG 173 Query: 265 DPWVAIAKRY--------PEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNI 316 + K + G + RV ++ G + G V + ++ Sbjct: 174 LISSNMVKEFAGLTVELLTPGAMVNARVRSVLKNGLLLSFLTYFTGTVDIFHLEDPLPGA 233 Query: 317 HPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITD 376 + + ++ +L ID + I L L N + + + GD + I D Sbjct: 234 DWNTKYSENQRLKARILYIDPVAKTIGLTLNPQLLN-NVLPSMSVDVGDVFKDAIVRRVD 292 Query: 377 F--GIFIGLDGGIDGLV-HLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGV 433 G+ + L + + ++S +S + ++Y G ++ A V+ + Sbjct: 293 ATIGMLLELPTKENVVAGYISSVSDEHIAK-LEKKYTVGKKVRARVIGHRVMDALAIASL 351 Query: 434 KQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATL 493 K+ D A + VTG V AV+ GA V+LA+GV+ S + + + Sbjct: 352 KESVVDQLLLSHADVQPAMNVTGTVIAVEPYGALVQLAEGVKALCPLQHMSEFQRSNPSS 411 Query: 494 VLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAM 547 VG +++ + D + I+L+ + + I + + ++ + Sbjct: 412 KFQVGSKLKFRVLSCDHHAKKITLTHKKTLITSKLSPIVSYESAVEGLVTHGFI 465 Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 85/618 (13%), Positives = 184/618 (29%), Gaps = 108/618 (17%) Query: 16 IETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAV 75 G+ G V I V+V + ++ ++VGD V + V Sbjct: 744 KTLAIGACTGGEVQEIKDYGVIVKLPNYKDVVGFVTHYQLGTP---VEVGDSVQARVLDV 800 Query: 76 EDGFGETLLS-------------REKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 L+ +K ++++ A E + V+ VI + Sbjct: 801 VKADRIVDLTVRPELLQVNKHDSTKKKEKNKKRSHPVMALELHQKVSAVIELVKDAYLVL 860 Query: 123 EL---NGIRAFLPGSLVDVRPVRDTLHL-EGKELEFKVI----KLDQKRNNVVVSRRAVI 174 L F + R G+ + V + + R +++S Sbjct: 861 SLPEQGNAIGFAAAGDYNSRRQDSHQRYSPGQRVVATVEHLGDETNGNRMLLLLSNTGDS 920 Query: 175 ESENSAERDQLLENLQ--EGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPS 232 ++ + L G V + + G + K+P Sbjct: 921 VEVKTSNTKKPRRELDKLIGAIVDAEI-----------IDGFE------------EKNPL 957 Query: 233 EIVNVGDEITVKV-----LKFDRERTR----VSLGLKQLGEDPWVAI-----AKRYPEGT 278 N+G ++ +V L+ R + L L+ + + G Sbjct: 958 SSFNIGQKVRCRVVQRVRLQKSPGRKERTSVLELSLRPSQLSGYTRPGSLPSLEELVPGQ 1017 Query: 279 KLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMD-WTNKNIHPSKVVNVGDVVEVMVLDIDE 337 +T V + D ++ + + G + + + ++ ++ VG V V +D Sbjct: 1018 CITAYVQEVKDDWAWLSVAPHLRGRLFILDSSTDPSELEKFAERFTVGTPVSCCVKSVDY 1077 Query: 338 ERRRISL-----------GLKQCKANPWQQFAET--------HNKGDRVEGKIKSITDF- 377 E+R + L + KGD + G++K + Sbjct: 1078 EKRTLDFIRRQPPQLQEKSLFDVPPMEDADSSSENNTKQVFWIQKGDSLGGRVKQVNPGV 1137 Query: 378 -GIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAE-RER--ISLGV 433 GI + + G VH++ +S + +K+G + VVL V+ + I L + Sbjct: 1138 GGISVQIAPSSFGRVHVTHLSDEWK-DNPASAFKEGQFVRCVVLGVEKNPNGKTVIDLTL 1196 Query: 434 KQLAEDPFNNWVALNKKGA----------------IVTGKVTAVDAKGATVELADGVEGY 477 ++ + + ++ G V + KG + LA V+ Sbjct: 1197 RKSLGGMVAANLQASDSATTRCVKFQCRTIKPLCLVLQGFVKSTSKKGCFISLAPQVDAI 1256 Query: 478 LRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAI---ATV 534 + S+ V+D G ++ + +D + +S++ + E + Sbjct: 1257 VLTCNLSKAFVKDPAESFPPGKLIKGRIINIDADLGRVEMSLKTSGQKKELTSTLLGRRF 1316 Query: 535 NKQEDANFSNNAMAEAFK 552 ++ + K Sbjct: 1317 GDFKEGEVVFGTIKRIEK 1334 Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 105/670 (15%), Positives = 206/670 (30%), Gaps = 134/670 (20%) Query: 20 PGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQG---ELEIQVGDEVDVALDAVE 76 G + G + I+ V + + G E QVG + + + Sbjct: 457 EGLVTHGFITGIEDIGCFVSFYNDVKGLVHKSALGIEAGVKAENVFQVGQSIKCRVLRSD 516 Query: 77 DGFGETLL-SREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL----NGIRAFL 131 L + R +A + V G ++ V + ++ +L Sbjct: 517 PAARRLSLSFITTSSRDDASEGAAGDELIGKVVAGTVHHVNDSVIIVNVSTPTGLVKGYL 576 Query: 132 PGSLVDV-----RPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLL 186 + ++ + + V+ + K+ +V ++++++++ +S D + Sbjct: 577 TFPHLSDTLGHIEQLKSVTKVGFQFDRLLVLDVTDKQKLIVSAKQSLLQAASSLPSD--I 634 Query: 187 ENLQEGMEVKGIVKNLTDYGAFVD-LGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKV 245 LQ + G V N+TD G FV LG + GL + +A + V PS +VG + +V Sbjct: 635 SQLQPQSVIPGYVANITDRGCFVRFLGRLTGLASVPQVADEFVSDPSNHFSVGQSVRAQV 694 Query: 246 LKFDRERTRVSLGLKQ-----------------------LGEDPWVAIAKRYPEGTKLTG 282 L+ + + SL LKQ E + AK G G Sbjct: 695 LEVYHDTGKFSLCLKQSVCFSTDVSLIQGYFLEEDKIVEASEASDLEWAKTLAIGACTGG 754 Query: 283 RVTNLTDYGCF---------------------VEIEEGVEGLV-------HVSEMDWTNK 314 V + DYG VE+ + V+ V + ++ + Sbjct: 755 EVQEIKDYGVIVKLPNYKDVVGFVTHYQLGTPVEVGDSVQARVLDVVKADRIVDLTVRPE 814 Query: 315 NIHPSK------------------VVNVGDVVEVM---------VLDIDEERRRISLGLK 347 + +K + + V + VL + E+ I Sbjct: 815 LLQVNKHDSTKKKEKNKKRSHPVMALELHQKVSAVIELVKDAYLVLSLPEQGNAIGFAAA 874 Query: 348 QCKANPWQQFAETHNKGDRVEGKIKSITD-------------FGIFIGLD---------- 384 + Q + ++ G RV ++ + D G + + Sbjct: 875 GDYNSRRQDSHQRYSPGQRVVATVEHLGDETNGNRMLLLLSNTGDSVEVKTSNTKKPRRE 934 Query: 385 -GGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVV-----LQVDAERER----ISLGVK 434 + G + ++I + + + G ++ V LQ R+ + L ++ Sbjct: 935 LDKLIGAIVDAEIIDGFEEKNPLSSFNIGQKVRCRVVQRVRLQKSPGRKERTSVLELSLR 994 Query: 435 QLAEDPFNNWV-----ALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRA--SEASRDR 487 + G +T V V A + +A + G L S Sbjct: 995 PSQLSGYTRPGSLPSLEELVPGQCITAYVQEVKDDWAWLSVAPHLRGRLFILDSSTDPSE 1054 Query: 488 VEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAM 547 +E +VG V VD + R + R + EK ++ + S N Sbjct: 1055 LEKFAERFTVGTPVSCCVKSVDYEKRTLDFIRRQPPQLQEKSLFDVPPMEDADSSSENNT 1114 Query: 548 AEAFKAAKGE 557 + F KG+ Sbjct: 1115 KQVFWIQKGD 1124 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 55/319 (17%), Positives = 108/319 (33%), Gaps = 32/319 (10%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDK--DVVLVDAGLKSESAIPAEQFKNAQG 58 M ++ + + + + G + G V ++ + V S + + Sbjct: 1103 MEDADSSSENNTKQVFWIQKGDSLGGRVKQVNPGVGGISVQIAPSSFGRVHVTHLSDEWK 1162 Query: 59 ELE---IQVGDEVDVALDAVEDG---------------FGETLLSREKAKRHEAWI---T 97 + + G V + VE G + + + Sbjct: 1163 DNPASAFKEGQFVRCVVLGVEKNPNGKTVIDLTLRKSLGGMVAANLQASDSATTRCVKFQ 1222 Query: 98 LEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRPVRDTLH--LEGKELEF 154 + G + K G + L + A + + V+D GK ++ Sbjct: 1223 CRTIKPLCLVLQGFVKSTSKKGCFISLAPQVDAIVLTCNLSKAFVKDPAESFPPGKLIKG 1282 Query: 155 KVIKLDQKRNNVVVSRRAV--IESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG 212 ++I +D V +S + + S + + +EG V G +K + +G FV + Sbjct: 1283 RIINIDADLGRVEMSLKTSGQKKELTSTLLGRRFGDFKEGEVVFGTIKRIEKFGIFVTIE 1342 Query: 213 --GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAI 270 V + H++++A K + VGD + +VLK D + R+SLGLK+ Sbjct: 1343 QSSVVTMCHMSEVADHYFKDIDKHYKVGDRVRARVLKVDNTKQRISLGLKESYFSNTETH 1402 Query: 271 AKRYPEGTKLTGRVTNLTD 289 + E +VTN D Sbjct: 1403 VQPVTEED--DMKVTNEED 1419 >UniRef50_D2RKJ8 Hydroxymethylbutenyl pyrophosphate reductase n=3 Tax=Veillonellaceae RepID=D2RKJ8_ACIFE Length = 680 Score = 266 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 117/383 (30%), Positives = 204/383 (53%), Gaps = 25/383 (6%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE 61 E+ L E ++ G IV VV + D V+VD G +SE ++ +Q+ + Sbjct: 276 METMESLLGEQE-CMKLHIGMIVEATVVEVTDDEVVVDFGYQSEGSVAFDQWTLGGTKDT 334 Query: 62 I----QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVK 117 + + GD+V + + A E+ G +LSR KA+ +AW+ L + D +TV VK Sbjct: 335 VAPTVKPGDKVTLKVIASENQDGLVVLSRTKAEADQAWLKLPEELADKKTVQVKGLRAVK 394 Query: 118 GGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESE 177 GG TV G+ F+P S +D++ V D EGK+LE +++++ ++ +V SRR V+ E Sbjct: 395 GGLTVSYEGLTGFIPASHLDLKHVDDVKEYEGKDLEVSLLEINPEKKRLVFSRRNVLREE 454 Query: 178 NSAE------------------RDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLL 218 +A+ ++ + EG V+G +K++ D+G FV++ V GL+ Sbjct: 455 RAAKNAAWKEERAKREEERHEALEKAFQTFHEGETVEGTIKSIVDFGMFVEIAPMVQGLV 514 Query: 219 HITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGT 278 HI++++W R P+++ VG++I V + D E+ R+SL +K L EDPWVA AK + G Sbjct: 515 HISEVSWDRSVKPADLYKVGEKINVYIKGLDEEKGRISLSVKALQEDPWVAAAKEFRVGD 574 Query: 279 KLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEE 338 +TG V +G V++ + EG++H+SE+ + P V+ +G V+V VL +D E Sbjct: 575 VVTGTVVRFLPFGAIVKLNDKNEGMIHISEIA-EQRIDKPEDVLEIGQEVKVKVLRVDTE 633 Query: 339 RRRISLGLKQCKANPWQQFAETH 361 ++I+L + + K + + + Sbjct: 634 HKKIALSITKAKEDAEKAEMRQY 656 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 105/403 (26%), Positives = 180/403 (44%), Gaps = 32/403 (7%) Query: 174 IESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKH-P 231 +E+ S +Q L GM V+ V +TD VD G +G + K Sbjct: 276 METMESLLGEQECMKLHIGMIVEATVVEVTDDEVVVDFGYQSEGSVAFDQWTLGGTKDTV 335 Query: 232 SEIVNVGDEITVKVLKFDRERTRVSLGL-KQLGEDPWVAIAKRYPEGTKLTGRVTNLTDY 290 + V GD++T+KV+ + + V L K + W+ + + + + + Sbjct: 336 APTVKPGDKVTLKVIASENQDGLVVLSRTKAEADQAWLKLPEELADKKTVQVKGLRAVKG 395 Query: 291 GCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCK 350 G V EG+ G + S +D + + G +EV +L+I+ E++R+ + Sbjct: 396 GLTVS-YEGLTGFIPASHLDLKH-VDDVKEY--EGKDLEVSLLEINPEKKRLVFSRRNVL 451 Query: 351 ANPW----------------------QQFAETHNKGDRVEGKIKSITDFGIFIGLDGGID 388 ++ +T ++G+ VEG IKSI DFG+F+ + + Sbjct: 452 REERAAKNAAWKEERAKREEERHEALEKAFQTFHEGETVEGTIKSIVDFGMFVEIAPMVQ 511 Query: 389 GLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALN 448 GLVH+S++SW+ + + YK G++I + +D E+ RISL VK L EDP+ Sbjct: 512 GLVHISEVSWDRSVK-PADLYKVGEKINVYIKGLDEEKGRISLSVKALQEDPWVAAAKEF 570 Query: 449 KKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGV 508 + G +VTG V GA V+L D EG + SE + R++ VL +G EV+ K V Sbjct: 571 RVGDVVTGTVVRFLPFGAIVKLNDKNEGMIHISEIAEQRIDKPEDVLEIGQEVKVKVLRV 630 Query: 509 DRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAF 551 D +++ I+LS+ E EK + ++ + + E Sbjct: 631 DTEHKKIALSITKAKEDAEKAEMRQYLGKKS--TLSQGLGEKL 671 Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 53/301 (17%), Positives = 107/301 (35%), Gaps = 27/301 (8%) Query: 258 GLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIH 317 ++ + + G + V +TD V+ EG V + Sbjct: 275 TMETMESLLGEQECMKLHIGMIVEATVVEVTDDEVVVDFGYQSEGSVAFDQWTLGGTKDT 334 Query: 318 PSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN-PWQQFAETHNKGDRVEGKIKSITD 376 + V GD V + V+ + + + L + +A+ W + E V+ K Sbjct: 335 VAPTVKPGDKVTLKVIASENQDGLVVLSRTKAEADQAWLKLPEELADKKTVQVKGLRAVK 394 Query: 377 FGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQL 436 G+ + + G+ G + S + ++ +G ++ +L+++ E++R+ + + Sbjct: 395 GGLTVSYE-GLTGFIPASHLDLKHV-DDVKEY--EGKDLEVSLLEINPEKKRLVFSRRNV 450 Query: 437 AEDPF----------------------NNWVALNKKGAIVTGKVTAVDAKGATVELADGV 474 + +G V G + ++ G VE+A V Sbjct: 451 LREERAAKNAAWKEERAKREEERHEALEKAFQTFHEGETVEGTIKSIVDFGMFVEIAPMV 510 Query: 475 EGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATV 534 +G + SE S DR + VG+++ G+D + ISLSV+A E A Sbjct: 511 QGLVHISEVSWDRSVKPADLYKVGEKINVYIKGLDEEKGRISLSVKALQEDPWVAAAKEF 570 Query: 535 N 535 Sbjct: 571 R 571 Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 77/185 (41%), Gaps = 9/185 (4%) Query: 8 LFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ---GELEIQV 64 E++ + G V G + +I + V+ + + + + +V Sbjct: 476 ALEKAFQ--TFHEGETVEGTIKSIVDFGMFVEIAPMVQGLVHISEVSWDRSVKPADLYKV 533 Query: 65 GDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL 124 G++++V + +++ G LS KA + + W+ K + + VTG + + G V+L Sbjct: 534 GEKINVYIKGLDEEKGRISLS-VKALQEDPWVAAAKEFRVGDVVTGTVVRFLPFGAIVKL 592 Query: 125 N-GIRAFLPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 N + S + + + + G+E++ KV+++D + + +S E AE Sbjct: 593 NDKNEGMIHISEIAEQRIDKPEDVLEIGQEVKVKVLRVDTEHKKIALSITKAKEDAEKAE 652 Query: 182 RDQLL 186 Q L Sbjct: 653 MRQYL 657 Score = 53.8 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 30/80 (37%), Gaps = 3/80 (3%) Query: 33 KDVVLVDAGLKSESAIPAEQFKN---AQGELEIQVGDEVDVALDAVEDGFGETLLSREKA 89 +V K+E I + + E +++G EV V + V+ + LS KA Sbjct: 585 PFGAIVKLNDKNEGMIHISEIAEQRIDKPEDVLEIGQEVKVKVLRVDTEHKKIALSITKA 644 Query: 90 KRHEAWITLEKAYEDAETVT 109 K + + T++ Sbjct: 645 KEDAEKAEMRQYLGKKSTLS 664 >UniRef50_A6LQP2 RNA binding S1 domain protein n=7 Tax=Clostridium RepID=A6LQP2_CLOB8 Length = 384 Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats. Identities = 107/353 (30%), Positives = 188/353 (53%), Gaps = 5/353 (1%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK--NAQG 58 + + ++L + G +++G V+ ++ V V+ + I E+ + Sbjct: 6 LESNMSELLNQY-DVKRLNRGDVLKGKVIDVNDKEVSVNIDYAFDGLIAKEEVSIDDRDP 64 Query: 59 ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 + DE+ V + + DG G LS KA + L + +++ + + + + KG Sbjct: 65 MEVVSKDDEIYVYVISPNDGEGYVELSLIKALEIKDREELSECFKEKKNIKVHVKEETKG 124 Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 G +R F+PGSL + L G++L+ ++ +LD K V+ SRR + E E Sbjct: 125 GVIAYYGNVRVFIPGSLASRERIE-LSSLVGRDLDVRITELDFKNKKVIASRRIIEEEEY 183 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVG 238 + + + +NL+EG + G+VK + +GAFVD+GGV+GL+H++D++W+RV P +IV G Sbjct: 184 NKNKKNIWDNLKEGEKRNGVVKKIVKFGAFVDIGGVEGLIHLSDLSWERVNKPEDIVKEG 243 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE 298 D + V + DR+ R+SL LK + ++PW K EG G+V LT +G FVE+ + Sbjct: 244 DNVEVFIGNVDRKNERLSLILKDVTKEPWTVHGKDINEGDIFEGKVIRLTTFGAFVELFD 303 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKA 351 G+EGLVH++E+ + PS V+ V+V VL ++ E +RI+L +K+ Sbjct: 304 GIEGLVHITEITDEH-IAKPSDVLEANQKVKVKVLSVNREEKRIALSIKEAVE 355 Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats. Identities = 90/373 (24%), Positives = 176/373 (47%), Gaps = 15/373 (4%) Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 ++ L G +KG V ++ D V++ DGL+ +++ + P E+V+ DEI V Sbjct: 19 VKRLNRGDVLKGKVIDVNDKEVSVNIDYAFDGLIAKEEVSIDD-RDPMEVVSKDDEIYVY 77 Query: 245 VLKFDRERTRVSLGL-KQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGL 303 V+ + V L L K L +++ + E + V T G + V Sbjct: 78 VISPNDGEGYVELSLIKALEIKDREELSECFKEKKNIKVHVKEETKGGV-IAYYGNVRVF 136 Query: 304 VHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPW----QQFAE 359 + S + VG ++V + ++D + +++ + + + + + Sbjct: 137 IPGSLASRERIELSSL----VGRDLDVRITELDFKNKKVIASRRIIEEEEYNKNKKNIWD 192 Query: 360 THNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVV 419 +G++ G +K I FG F+ + GG++GL+HLSD+SW + K+GD + + Sbjct: 193 NLKEGEKRNGVVKKIVKFGAFVDI-GGVEGLIHLSDLSWERVNK-PEDIVKEGDNVEVFI 250 Query: 420 LQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLR 479 VD + ER+SL +K + ++P+ +G I GKV + GA VEL DG+EG + Sbjct: 251 GNVDRKNERLSLILKDVTKEPWTVHGKDINEGDIFEGKVIRLTTFGAFVELFDGIEGLVH 310 Query: 480 ASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQED 539 +E + + + + VL +V+ K V+R+ + I+LS++ E + K+ + ++ ++ Sbjct: 311 ITEITDEHIAKPSDVLEANQKVKVKVLSVNREEKRIALSIKEAVETN-KEYLDYIDNSDE 369 Query: 540 ANFSNNAMAEAFK 552 + S + + FK Sbjct: 370 SGTSLGDLLKGFK 382 >UniRef50_B6K2R4 U3 snoRNP-associated protein Rrp5 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K2R4_SCHJY Length = 1703 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 100/582 (17%), Positives = 202/582 (34%), Gaps = 36/582 (6%) Query: 7 QLFEESLKEIETRPGSIVRGVVVAIDKDVV---LVDAGLKSESAIPAEQFKNAQGELEIQ 63 + ++ PG++ ++ + ++ V L+ + + + +N + E Sbjct: 305 KALDKFPSVQAILPGNLANVLITDVLENGVTGKLMGVLNVTSDLMHSSLSQNERLANEFT 364 Query: 64 VGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETV-------TGVINGKV 116 + + T+ + T + E + ++ Sbjct: 365 IAKTRPARILYTIPSSPPTVAVTFLPHAVDFNKTSAEQENPLEKLPLGFTVEEAKVSAVS 424 Query: 117 KG-GFT--VELNGIRAFLPGSLVDVRPVRDTLHLEG-----KELEFKVIKLDQKRNNVVV 168 G V + G+R F S + V G + ++ N V+ Sbjct: 425 PSLGIFCDVGVEGVRGFAHISRLSDSRVDKVDPSSGDYQLHSTHKARITGFSFVDNLFVL 484 Query: 169 SRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKR 227 ++ + ++++ G +KG V L G V L G++GL+ MA + Sbjct: 485 ----SLQESIIDQPFLRVDDIPVGKVIKGSVVRLFAQGVIVKLSEGINGLVPTAHMADVQ 540 Query: 228 VKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLG---EDPWVAIAKRYPEGTKLTGRV 284 + P G + +VL D +R RV L LK+ + P + + G K G Sbjct: 541 LHFPERKFKEGLPVKCRVLAVDSDRKRVLLTLKKSLLNSDLPIIDSYESVQPGAKAVGVF 600 Query: 285 TNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISL 344 + + G VE V G + +EM VG V V V++ D E R++ L Sbjct: 601 ARILNTGAVVEFYNHVRGFLPTAEMSEAY-IQDARDHFKVGQTVSVTVVNCDPETRKMRL 659 Query: 345 GLKQCK-ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWN---V 400 ++ N Q G V G + T+ + + L ++G++ + +S Sbjct: 660 SCREQNWTNERSQRFTDLEVGSVVSGAVSQKTENSVIVDLGNSVNGVIQVGHLSDGDAKK 719 Query: 401 AGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWV-----ALNKKGAIVT 455 + + +VL+ D E+ + L +KQ D + + K+G Sbjct: 720 CQKILSKIRATTKLSEVLVLRKDLEKRIVFLTLKQSLIDAAKAGMLPKTLSDLKEGVKYA 779 Query: 456 GKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAI 515 G V + G +E A+GV + S + V + + +D + Sbjct: 780 GFVKNITEFGVFIEFANGVTALAPKAYLSENYVPLPAALFKPFQSLTCVCFSIDMEKERA 839 Query: 516 SLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAAKGE 557 +S++ D+ +EK T +K + ++ +A+ G+ Sbjct: 840 LVSLKPLDKVNEKVDEITESKYVVIEPVDESITKAYDYTTGK 881 Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 107/600 (17%), Positives = 212/600 (35%), Gaps = 69/600 (11%) Query: 6 AQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ---GELEI 62 A + ++L + + G G V I + V ++ + P Sbjct: 762 AGMLPKTLS--DLKEGVKYAGFVKNITEFGVFIEFANGVTALAPKAYLSENYVPLPAALF 819 Query: 63 QVGDEVDVALDAVEDGFGE--TLLSREKAKRHEAWITLEKAYEDAETVT----------- 109 + + +++ L + E Y E V Sbjct: 820 KPFQSLTCVCFSIDMEKERALVSLKPLDKVNEKVDEITESKYVVIEPVDESITKAYDYTT 879 Query: 110 -----GVINGKVKGGFTVEL-NGIRAFLPGSL-------VDVRPVRDTLHLEGKELEFKV 156 GVI+ ++L + + S + + +G +++ +V Sbjct: 880 GKLTWGVISSVKATQLNIDLAKNVHGRVDVSEAFDNFEDISDPSKPFSTFKKGDKIQVRV 939 Query: 157 IK-LDQKRNNVV-----VSRRAVIESENSAERDQLLE------NLQEGMEVKGIVKNLTD 204 + D K + + VS R +E + E ++G V N T Sbjct: 940 LGTHDAKNHKFLPISHRVSPRQFLELSIKPSVMKQTEFSGEALTFKKGDTCIAFVNNTTP 999 Query: 205 YGAFVDLG-GVDGLLHITDMAWK--RVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQ 261 +V +G + G + D + + +E VG I VL ++L Sbjct: 1000 ECIWVSVGSNLRGRIAALDASNDLETLNSITEKFPVGSAIQCTVLS---SGEILTLS--- 1053 Query: 262 LGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKV 321 V + G KL GR++N+ D G V++ + G V +++ + P+ + Sbjct: 1054 --AMEHVVDYETISAGDKLLGRISNINDMGMIVQLPGALSGRVSRTDVSDDFE-TSPNSL 1110 Query: 322 VNVGDVVEVMVLDIDEERRRISLGLKQCK-------ANPWQQFAETHNKGDRVEGKIKSI 374 + V V VL +D R+I+L + +P + E G + ++ Sbjct: 1111 FSRNQFVRVYVLSVDVPNRKIALSTRASHFEEGKEIKDPEIKSFEDVEMNRVYRGFVTNV 1170 Query: 375 TDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVK 434 D G+F+ L + G V ++++ + +E ++ + A V+ VD E++RI L +K Sbjct: 1171 ADTGLFVTLGRNVVGRVKIAELFDSFI-KEWKPHFQVSQLVKAKVVHVDQEKKRIELSLK 1229 Query: 435 QLA---EDPFNNWVALNKKGAIVTGKVTAVDAKGATVELA--DGVEGYLRASEASRDRVE 489 ++ + + G+ V G V + G + L D + G SE + V Sbjct: 1230 PSRVSSKEASAKEFSEIEVGSNVDGTVIRCEDFGVLIRLDGTDNIVGLCHKSEIADTTVN 1289 Query: 490 DATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAE 549 D T + S GD+V A VD + R ++L +++ + D + + + ++A E Sbjct: 1290 DVTKLYSAGDKVRAHVLSVDPEKRRVALGLKSSYFDADSD-VDMYESGAEEDLESSADEE 1348 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 100/596 (16%), Positives = 213/596 (35%), Gaps = 68/596 (11%) Query: 10 EESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEV- 68 E S + + GS+V G V ++ V+VD G I + + ++ ++ Sbjct: 669 ERSQRFTDLEVGSVVSGAVSQKTENSVIVDLGNSVNGVIQVGHLSDGDAKKCQKILSKIR 728 Query: 69 ------DVALDAVEDGFGETLLSREKAKRHEAWITLEKA----YEDAETVTGVINGKVKG 118 +V + + L+ +++ A + ++ G + + Sbjct: 729 ATTKLSEVLVLRKDLEKRIVFLTLKQSLIDAAKAGMLPKTLSDLKEGVKYAGFVKNITEF 788 Query: 119 GFTVEL-NGIRAFLPGSLVDVRPVRDTLHLEG--KELEFKVIKLDQKRNNVVVSRRAVIE 175 G +E NG+ A P + + V L + L +D ++ +VS + + + Sbjct: 789 GVFIEFANGVTALAPKAYLSENYVPLPAALFKPFQSLTCVCFSIDMEKERALVSLKPLDK 848 Query: 176 SENSAERDQLLENLQE---------------GMEVKGIVKNLTDYGAFVDL-GGVDGLLH 219 + + + G G++ ++ +DL V G + Sbjct: 849 VNEKVDEITESKYVVIEPVDESITKAYDYTTGKLTWGVISSVKATQLNIDLAKNVHGRVD 908 Query: 220 ITDMAWKRVK-----HPSEIVNVGDEITVKVLK-FDRERTR-------------VSLGLK 260 +++ P GD+I V+VL D + + + L +K Sbjct: 909 VSEAFDNFEDISDPSKPFSTFKKGDKIQVRVLGTHDAKNHKFLPISHRVSPRQFLELSIK 968 Query: 261 Q--LGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIH- 317 + + + A + +G V N T +V + + G + + + ++ Sbjct: 969 PSVMKQTEFSGEALTFKKGDTCIAFVNNTTPECIWVSVGSNLRGRIAALDASNDLETLNS 1028 Query: 318 PSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDF 377 ++ VG ++ VL ++L A ET + GD++ G+I +I D Sbjct: 1029 ITEKFPVGSAIQCTVLS---SGEILTLS-----AMEHVVDYETISAGDKLLGRISNINDM 1080 Query: 378 GIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLA 437 G+ + L G + G V +D+S + + + + VL VD +I+L + Sbjct: 1081 GMIVQLPGALSGRVSRTDVSDDFET-SPNSLFSRNQFVRVYVLSVDVPNRKIALSTRASH 1139 Query: 438 -------EDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVED 490 +DP + + G VT V G V L V G ++ +E +++ Sbjct: 1140 FEEGKEIKDPEIKSFEDVEMNRVYRGFVTNVADTGLFVTLGRNVVGRVKIAELFDSFIKE 1199 Query: 491 ATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNA 546 V V+AK VD++ + I LS++ + ++ + ++ E + + Sbjct: 1200 WKPHFQVSQLVKAKVVHVDQEKKRIELSLKPSRVSSKEASAKEFSEIEVGSNVDGT 1255 Score = 197 bits (502), Expect = 6e-49, Method: Composition-based stats. Identities = 92/563 (16%), Positives = 193/563 (34%), Gaps = 58/563 (10%) Query: 13 LKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE------------- 59 G+IV G + I+ + V +P ++ E Sbjct: 119 FSYKSVVEGTIVFGRISEINTLDLAVSLPNCLTGYVPITSISDSLSERLDKLDEVDEDNK 178 Query: 60 -----------LEIQVGDEVDVALDAVEDG-----FGETLLSREKAKRHEAWITLEKAYE 103 VG V + ++ + LS + + Sbjct: 179 SVAQESFPDLLDFYTVGQWVRARVTSITNDSSSKKKKRIELSLRPQDVNGGLG--ADGFV 236 Query: 104 DAETVTGVINGKVKGGFTVE--LNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQ 161 + V+ G ++ + FLP +T +EG+ + V + Sbjct: 237 KGSVIQTVVTSWEDHGIAMDLGIEDFTGFLPL----GAYNPETEFMEGQTVLCTVTS--K 290 Query: 162 KRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHI 220 K ++ S + ++ ++ + G ++ ++ + G L GV + + Sbjct: 291 KDRVFQLAMHQA--SPKALDKFPSVQAILPGNLANVLITDVLENGVTGKLMGVLNVTSDL 348 Query: 221 TDMAWKRVKHPSEIVNVGDEITVKVLKFDR-ERTRVSLGLKQLGEDPWVAIAKRYPEGTK 279 + + + + + ++L V++ D A++ K Sbjct: 349 MHSSLSQNERLANEFTIAKTRPARILYTIPSSPPTVAVTFLPHAVDFNKTSAEQENPLEK 408 Query: 280 L-------TGRVTNLTDY-GCFVEIE-EGVEGLVHVSEMDWTN--KNIHPSKVVNVGDVV 328 L +V+ ++ G F ++ EGV G H+S + + K S + Sbjct: 409 LPLGFTVEEAKVSAVSPSLGIFCDVGVEGVRGFAHISRLSDSRVDKVDPSSGDYQLHSTH 468 Query: 329 EVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGID 388 + + L L++ + + G ++G + + G+ + L GI+ Sbjct: 469 KARITGFSFVDNLFVLSLQESIIDQPFLRVDDIPVGKVIKGSVVRLFAQGVIVKLSEGIN 528 Query: 389 GLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQ---LAEDPFNNWV 445 GLV + ++ R++K+G + VL VD++R+R+ L +K+ ++ P + Sbjct: 529 GLVPTAHMADVQLHF-PERKFKEGLPVKCRVLAVDSDRKRVLLTLKKSLLNSDLPIIDSY 587 Query: 446 ALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKF 505 + GA G + GA VE + V G+L +E S ++DA VG V Sbjct: 588 ESVQPGAKAVGVFARILNTGAVVEFYNHVRGFLPTAEMSEAYIQDARDHFKVGQTVSVTV 647 Query: 506 TGVDRKNRAISLSVRAKDEADEK 528 D + R + LS R ++ +E+ Sbjct: 648 VNCDPETRKMRLSCREQNWTNER 670 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 80/377 (21%), Positives = 144/377 (38%), Gaps = 27/377 (7%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN----- 55 + S + E S + + + G V + + V G I A N Sbjct: 967 IKPSVMKQTEFSGEALTFKKGDTCIAFVNNTTPECIWVSVGSNLRGRIAALDASNDLETL 1026 Query: 56 AQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGK 115 + VG + + + + +L+ + + T+ + + G I+ Sbjct: 1027 NSITEKFPVGSAIQCTVLSSGE-----ILTLSAMEHVVDYETISA----GDKLLGRISNI 1077 Query: 116 VKGGFTVELNG-IRAFLPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRA 172 G V+L G + + + V L + + V+ +D + +S RA Sbjct: 1078 NDMGMIVQLPGALSGRVSRTDVSDDFETSPNSLFSRNQFVRVYVLSVDVPNRKIALSTRA 1137 Query: 173 VIESENSAERD---QLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRV 228 E +D + E+++ +G V N+ D G FV LG V G + I ++ + Sbjct: 1138 SHFEEGKEIKDPEIKSFEDVEMNRVYRGFVTNVADTGLFVTLGRNVVGRVKIAELFDSFI 1197 Query: 229 KHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRY---PEGTKLTGRVT 285 K V + KV+ D+E+ R+ L LK A AK + G+ + G V Sbjct: 1198 KEWKPHFQVSQLVKAKVVHVDQEKKRIELSLKPSRVSSKEASAKEFSEIEVGSNVDGTVI 1257 Query: 286 NLTDYGCFVEIE--EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRIS 343 D+G + ++ + + GL H SE+ T +K+ + GD V VL +D E+RR++ Sbjct: 1258 RCEDFGVLIRLDGTDNIVGLCHKSEIADT-TVNDVTKLYSAGDKVRAHVLSVDPEKRRVA 1316 Query: 344 LGLKQCKANPWQQFAET 360 LGLK + Sbjct: 1317 LGLKSSYFDADSDVDMY 1333 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 70/528 (13%), Positives = 161/528 (30%), Gaps = 55/528 (10%) Query: 45 ESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYED 104 E ++P F + G V + + L + E Sbjct: 111 EGSVPISHFSY----KSVVEGTIVFGRISEINTLDLAVSLPNCLTGYVPITSISDSLSER 166 Query: 105 AETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQK 162 + + ++ K V D L G+ + +V + Sbjct: 167 LDKLD-EVDEDNKS-----------------VAQESFPDLLDFYTVGQWVRARVTSITND 208 Query: 163 RNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG--GVDGLLHI 220 ++ R + + +G ++ +V + D+G +DLG G L + Sbjct: 209 SSSKKKKRIELSLRPQDVNGGLGADGFVKGSVIQTVVTSWEDHGIAMDLGIEDFTGFLPL 268 Query: 221 TDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDP--WVAIAKRYPEGT 278 +P G + V ++ L + Q + G Sbjct: 269 GAY------NPETEFMEGQTVLCTVTS--KKDRVFQLAMHQASPKALDKFPSVQAILPGN 320 Query: 279 KLTGRVTNLTDYGCFVEIEEGVEG---LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVL-D 334 +T++ + G ++ + L+H S + + + + +L Sbjct: 321 LANVLITDVLENGVTGKLMGVLNVTSDLMHSS-LSQNERLAN---EFTIAKTRPARILYT 376 Query: 335 IDEERRRISLGLKQCKAN------PWQQFAETHNKGDRVE-GKIKSITDF-GIFIGLD-G 385 I +++ + + E G VE K+ +++ GIF + Sbjct: 377 IPSSPPTVAVTFLPHAVDFNKTSAEQENPLEKLPLGFTVEEAKVSAVSPSLGIFCDVGVE 436 Query: 386 GIDGLVHLSDISWNVA--GEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNN 443 G+ G H+S +S + + + +Y+ A + L +++ D Sbjct: 437 GVRGFAHISRLSDSRVDKVDPSSGDYQLHSTHKARITGFSFVDNLFVLSLQESIIDQPFL 496 Query: 444 WVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEA 503 V G ++ G V + A+G V+L++G+ G + + + ++ G V+ Sbjct: 497 RVDDIPVGKVIKGSVVRLFAQGVIVKLSEGINGLVPTAHMADVQLHFPERKFKEGLPVKC 556 Query: 504 KFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAF 551 + VD + + L+++ + I + + + A Sbjct: 557 RVLAVDSDRKRVLLTLKKSLLNSDLPIIDSYESVQPGAKAVGVFARIL 604 >UniRef50_B0CR68 Predicted protein n=3 Tax=Agaricales RepID=B0CR68_LACBS Length = 1468 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 97/551 (17%), Positives = 207/551 (37%), Gaps = 41/551 (7%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAI---PAEQFKNAQGELEIQVGDE 67 + L+ + G +++G + + + V + + E + G Sbjct: 521 KFLQVSDVEVGEVIKGTIKKLTDSGLFVSLSRSIDGVVWPNHYADITLKHPEKRFKPGAG 580 Query: 68 VDVALDAVEDGFGETLLSREKAKRHEAWITLEKAY--EDAETVTGVINGKVKGGFTVEL- 124 + + AV+ L+ +K L K + VI VE Sbjct: 581 IKCKVLAVDVYRKRISLTAKKTLLDSNLPILSKIDDAKPGFVTHAVIFKVYGNHLLVEFY 640 Query: 125 NGIRAFLPGSLVDVRPVRDTLH--LEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 N ++A +P + P+ G+ + ++I +D ++ +V S R + + + Sbjct: 641 NNLKAIVPAKEISDIPINKLSDSFPIGRVVRTRIISVDTEQGRIVASIRQALG---NKDP 697 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDL--GGVDGLLHITDMAWKRVKHPSE---IVNV 237 + ++ G VKG + + A + L + LL + ++A R E + V Sbjct: 698 VSDISAVEIGNIVKGSISEIHKDNALIILQPTQIRALLSLKNLANFRQISLGELLVKLKV 757 Query: 238 GDEI-TVKVLKFDRERTRVSLG---LKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCF 293 GDE+ + V+ + ++ V + K G + GRVT T + Sbjct: 758 GDELDELVVVTRNPDKGVVIVANTPKKVPLLKGSSVSIDSLKVGQIVGGRVTRHTRHSAL 817 Query: 294 VEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP 353 +++ + G +H +++ + V ++ +++ID + ++ L + K P Sbjct: 818 IKVTPQIGGTLHPTDISDDYDMGLV--LPPVDSILRAAIIEIDRSKNQLRLSTRHSKMYP 875 Query: 354 ---------WQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEE 404 + GD V G IKS+ D G+F+ + ID V + ++ + E+ Sbjct: 876 ESTKKIVDQEIIHIFDIHVGDTVRGSIKSVADHGLFVTIGRDIDARVQIRELFDDFV-ED 934 Query: 405 AVREYKKGDEIAAVVLQVDAERERISLGVKQ---LAEDPFNNWVALNKKGAIVTGKVTAV 461 +++ + ++L VD + ++ + +K + + +A K G V G V + Sbjct: 935 WKARFQEKQIVKGLILSVDLQTRKVEMTLKSGDLSTRNGSSVGLADLKVGQKVDGLVKRI 994 Query: 462 DAKGATVELAD-GVEGYLRASEASRDRVEDAT---LVLSVGDEVEAKFTGVDRKNRAISL 517 + G + + + G S+ S + + GD V+A G+D+ ISL Sbjct: 995 EDYGLFINIDRSKLNGLCHKSQLSDSQGAGVSFALNSFHEGDRVKAVIIGIDKA--RISL 1052 Query: 518 SVRAKDEADEK 528 S++ +E Sbjct: 1053 SLKPSLFNEED 1063 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 111/615 (18%), Positives = 213/615 (34%), Gaps = 82/615 (13%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN--------------- 55 E L G + G +V I +LV + + +P + Sbjct: 116 EHLNYKRLNVGMKIFGQIVGILPLSLLVSLPNQLSAHVPITNISSQFTSALERMDNISEG 175 Query: 56 ----------------AQGELEIQVGDEVDVALDAVE------------------DGFGE 81 +VG V + A+ Sbjct: 176 SGADDEEGAGLSDSDTPDLSDIFRVGQYVRAVVSAIHAPGSSEASSLGKSRDETSKASRR 235 Query: 82 TLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN--GIRAFLPGSLVDVR 139 LS + + + ++ T+T + G+ ++L G+ FL +R Sbjct: 236 VELSLVPERVNAGVQKAD--LKNGFTMTAAVKSVEDHGYILDLGISGVEGFLAFKDTKMR 293 Query: 140 PVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIV 199 P G+ L+ V KL V+ + S + + ++ G V+ ++ Sbjct: 294 PSGSIALDVGRLLDVSVTKLSANGRTCNVTTDQALFSSSYVTEMSSVTSVLPGALVQSLI 353 Query: 200 KNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSEIVNVGDEITVKVL-KFDRERTRVSL 257 + G + + G +G + + K + VG ++ ++L ++ R +L Sbjct: 354 TAIHPTGLNLQVLGFFEGTVDPVHL-----KKGGKAYQVGKKVRARILYEYSSSPPRFAL 408 Query: 258 GL-------------KQLGEDPWVAIAKRYPEGTKLT-GRVTNL-TDYGCFVEIEEGVEG 302 L + +I + +P GT + +V + T+ G VE++ GVEG Sbjct: 409 ALVDHLTNLSAPCIKSKELPAETKSIQEAFPLGTIIESAKVLRVETERGIIVEVQPGVEG 468 Query: 303 LVHVSEMDWTN-KNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETH 361 VH+S + + ++ + G + V + L K Sbjct: 469 FVHISHLSEDHVPSLSSTGPWKPGTLHRARVTGYFSFDGLLQLSFKPSIIEQKFLQVSDV 528 Query: 362 NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQ 421 G+ ++G IK +TD G+F+ L IDG+V + + + + + +K G I VL Sbjct: 529 EVGEVIKGTIKKLTDSGLFVSLSRSIDGVVWPNHYAD-ITLKHPEKRFKPGAGIKCKVLA 587 Query: 422 VDAERERISLGVKQ---LAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYL 478 VD R+RISL K+ + P + + K G + + V VE + ++ + Sbjct: 588 VDVYRKRISLTAKKTLLDSNLPILSKIDDAKPGFVTHAVIFKVYGNHLLVEFYNNLKAIV 647 Query: 479 RASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQE 538 A E S + + +G V + VD + I S+R KD ++ ++ E Sbjct: 648 PAKEISDIPINKLSDSFPIGRVVRTRIISVDTEQGRIVASIRQALGN--KDPVSDISAVE 705 Query: 539 DANFSNNAMAEAFKA 553 N +++E K Sbjct: 706 IGNIVKGSISEIHKD 720 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 71/561 (12%), Positives = 195/561 (34%), Gaps = 37/561 (6%) Query: 21 GSIVR-GVVVAID-KDVVLVDAGLKSESAIPAEQFKNAQGELEI-----QVGDEVDVALD 73 G+I+ V+ ++ + ++V+ E + + G + Sbjct: 441 GTIIESAKVLRVETERGIIVEVQPGVEGFVHISHLSEDHVPSLSSTGPWKPGTLHRARVT 500 Query: 74 AVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFL- 131 G LS + + + ++ + E E + G I G V L+ I + Sbjct: 501 GYFSFDGLLQLSFKPSIIEQKFLQVSD-VEVGEVIKGTIKKLTDSGLFVSLSRSIDGVVW 559 Query: 132 --PGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENL 189 + + ++ G ++ KV+ +D R + ++ + + N + +++ Sbjct: 560 PNHYADITLKHPEK-RFKPGAGIKCKVLAVDVYRKRISLTAKKTLLDSNLPILSK-IDDA 617 Query: 190 QEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKF 248 + G ++ + V+ + ++ +++ + S+ +G + +++ Sbjct: 618 KPGFVTHAVIFKVYGNHLLVEFYNNLKAIVPAKEISDIPINKLSDSFPIGRVVRTRIISV 677 Query: 249 DRERTRVSLGLKQLGEDPWVAI-AKRYPEGTKLTGRVTNLTDYGCFVEIEEG-VEGLVHV 306 D E+ R+ ++Q + G + G ++ + + ++ + L+ + Sbjct: 678 DTEQGRIVASIRQALGNKDPVSDISAVEIGNIVKGSISEIHKDNALIILQPTQIRALLSL 737 Query: 307 SEMDWTNKNI--HPSKVVNVGDVV-EVMVLDIDEERRRISLGLKQCKA---NPWQQFAET 360 + + + VGD + E++V+ + ++ + + K ++ Sbjct: 738 KNLANFRQISLGELLVKLKVGDELDELVVVTRNPDKGVVIVANTPKKVPLLKGSSVSIDS 797 Query: 361 HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL 420 G V G++ T I + I G +H +DIS + + + A ++ Sbjct: 798 LKVGQIVGGRVTRHTRHSALIKVTPQIGGTLHPTDISDDYDMG--LVLPPVDSILRAAII 855 Query: 421 QVDAERERISLGVKQLAEDPFNN---------WVALNKKGAIVTGKVTAVDAKGATVELA 471 ++D + ++ L + P + + G V G + +V G V + Sbjct: 856 EIDRSKNQLRLSTRHSKMYPESTKKIVDQEIIHIFDIHVGDTVRGSIKSVADHGLFVTIG 915 Query: 472 DGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRA---KDEADEK 528 ++ ++ E D VED V+ VD + R + +++++ Sbjct: 916 RDIDARVQIRELFDDFVEDWKARFQEKQIVKGLILSVDLQTRKVEMTLKSGDLSTRNGSS 975 Query: 529 DAIATVNKQEDANFSNNAMAE 549 +A + + + + + Sbjct: 976 VGLADLKVGQKVDGLVKRIED 996 Score = 194 bits (494), Expect = 7e-48, Method: Composition-based stats. Identities = 94/465 (20%), Positives = 184/465 (39%), Gaps = 37/465 (7%) Query: 14 KEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE---LEIQVGDEVDV 70 K + +PG + V+ + + +LV+ ++ +PA++ + +G V Sbjct: 613 KIDDAKPGFVTHAVIFKVYGNHLLVEFYNNLKAIVPAKEISDIPINKLSDSFPIGRVVRT 672 Query: 71 ALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN--GIR 128 + +V+ G + S +A ++ ++ A E V G I+ K + L IR Sbjct: 673 RIISVDTEQGRIVASIRQALGNKDPVSDISAVEIGNIVKGSISEIHKDNALIILQPTQIR 732 Query: 129 AFLPGSLVDVRPVRDTLHL-----EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERD 183 A L + L G EL+ V+ VV+ + Sbjct: 733 ALLSLKNLANFRQISLGELLVKLKVGDELDELVVVTRNPDKGVVIVANTPKKVPLLKGSS 792 Query: 184 QLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEI- 241 +++L+ G V G V T + A + + + G LH TD++ ++ D I Sbjct: 793 VSIDSLKVGQIVGGRVTRHTRHSALIKVTPQIGGTLHPTDISDDY--DMGLVLPPVDSIL 850 Query: 242 TVKVLKFDRERTRVSLGLKQLGEDPWVA---------IAKRYPEGTKLTGRVTNLTDYGC 292 +++ DR + ++ L + P G + G + ++ D+G Sbjct: 851 RAAIIEIDRSKNQLRLSTRHSKMYPESTKKIVDQEIIHIFDIHVGDTVRGSIKSVADHGL 910 Query: 293 FVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCK-- 350 FV I ++ V + E+ + + +V+ ++L +D + R++ + LK Sbjct: 911 FVTIGRDIDARVQIREL-FDDFVEDWKARFQEKQIVKGLILSVDLQTRKVEMTLKSGDLS 969 Query: 351 -ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDG-GIDGLVHLSDISWNVA--GEEAV 406 N G +V+G +K I D+G+FI +D ++GL H S +S + A+ Sbjct: 970 TRNGSSVGLADLKVGQKVDGLVKRIEDYGLFINIDRSKLNGLCHKSQLSDSQGAGVSFAL 1029 Query: 407 REYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKG 451 + +GD + AV++ +D RISL +K P ++G Sbjct: 1030 NSFHEGDRVKAVIIGIDKA--RISLSLK-----PSLFNEEDFQEG 1067 Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 90/542 (16%), Positives = 194/542 (35%), Gaps = 41/542 (7%) Query: 9 FEESLKEIETRPGSIVRGVVVAIDKDVVLVDAG-LKSESAIPAEQFK-NAQGELEIQVGD 66 +++ + + G + V +++ ++D G E + + K G + + VG Sbjct: 245 VNAGVQKADLKNGFTMTAAVKSVEDHGYILDLGISGVEGFLAFKDTKMRPSGSIALDVGR 304 Query: 67 EVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAET---VTGVINGKVKGGFTVE 123 +DV++ + ++ ++A +++T + V +I G ++ Sbjct: 305 LLDVSVTKLSANGRTCNVTTDQALFSSSYVTEMSSVTSVLPGALVQSLITAIHPTGLNLQ 364 Query: 124 LNG-IRAFLPGSLVDVRPVRDTLHLEGKELEFKVI-KLDQKRNNVVVSRRAVI------- 174 + G + + + GK++ +++ + ++ + Sbjct: 365 VLGFFEGTVDPVHL---KKGGKAYQVGKKVRARILYEYSSSPPRFALALVDHLTNLSAPC 421 Query: 175 --ESENSAERDQLLENLQEGMEVK-GIVKNL-TDYGAFVDL-GGVDGLLHITDMAWKRVK 229 E AE + E G ++ V + T+ G V++ GV+G +HI+ ++ V Sbjct: 422 IKSKELPAETKSIQEAFPLGTIIESAKVLRVETERGIIVEVQPGVEGFVHISHLSEDHVP 481 Query: 230 HPSEI--VNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNL 287 S G +V + + L K + G + G + L Sbjct: 482 SLSSTGPWKPGTLHRARVTGYFSFDGLLQLSFKPSIIEQKFLQVSDVEVGEVIKGTIKKL 541 Query: 288 TDYGCFVEIEEGVEGLV---HVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISL 344 TD G FV + ++G+V H +++ HP K G ++ VL +D R+RISL Sbjct: 542 TDSGLFVSLSRSIDGVVWPNHYADITL----KHPEKRFKPGAGIKCKVLAVDVYRKRISL 597 Query: 345 GLKQCKAN---PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVA 401 K+ + P + G I + + + + +V +IS Sbjct: 598 TAKKTLLDSNLPILSKIDDAKPGFVTHAVIFKVYGNHLLVEFYNNLKAIVPAKEISDIPI 657 Query: 402 GEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFN-NWVALNKKGAIVTGKVTA 460 + + G + ++ VD E+ RI ++Q + + ++ + G IV G ++ Sbjct: 658 NK-LSDSFPIGRVVRTRIISVDTEQGRIVASIRQALGNKDPVSDISAVEIGNIVKGSISE 716 Query: 461 VDAKGATVELAD-GVEGYLRASEASRDRVEDATL---VLSVGDEV-EAKFTGVDRKNRAI 515 + A + L + L + R L VGDE+ E + + Sbjct: 717 IHKDNALIILQPTQIRALLSLKNLANFRQISLGELLVKLKVGDELDELVVVTRNPDKGVV 776 Query: 516 SL 517 + Sbjct: 777 IV 778 Score = 75.8 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 24/198 (12%), Positives = 59/198 (29%), Gaps = 12/198 (6%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL---EIQVGDE 67 E + + G VRG + ++ + V G ++ + + + E Q Sbjct: 885 EIIHIFDIHVGDTVRGSIKSVADHGLFVTIGRDIDARVQIRELFDDFVEDWKARFQEKQI 944 Query: 68 VDVALDAVEDGFGET--LLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN 125 V + +V+ + L + + V G++ G + ++ Sbjct: 945 VKGLILSVDLQTRKVEMTLKSGDLSTRNGSSVGLADLKVGQKVDGLVKRIEDYGLFINID 1004 Query: 126 --GIRAFLPGSLVDVR-----PVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 + S + EG ++ +I +D+ R ++ + E + Sbjct: 1005 RSKLNGLCHKSQLSDSQGAGVSFALNSFHEGDRVKAVIIGIDKARISLSLKPSLFNEEDF 1064 Query: 179 SAERDQLLENLQEGMEVK 196 D + +K Sbjct: 1065 QEGADTNEPIPEPSGVIK 1082 >UniRef50_UPI00016B22D3 RNA binding S1 domain protein n=2 Tax=candidate division TM7 RepID=UPI00016B22D3 Length = 358 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 106/351 (30%), Positives = 185/351 (52%), Gaps = 22/351 (6%) Query: 14 KEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALD 73 + G +V G V+++ K VL+D G + +P + ++ I GDEV ++ Sbjct: 18 SAKQLVAGEVVTGKVLSLKKHEVLIDLGAQGVGFVPRREVGFSR---NISEGDEVSASVV 74 Query: 74 AVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPG 133 E G +LLS KA + W + E E + +GG VE G+R FLP Sbjct: 75 DTELENGMSLLSLRKAVKDRGWEEVSARLESGEVIDIQPYDANRGGLLVEYEGVRGFLPV 134 Query: 134 SLVDVRP------------VRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 S + ++ +L GK ++ +++ D+K N ++ S + ++ Sbjct: 135 SQLSAEHYPRVGSSDKDEILQRLNNLIGKTMKVRILDADRKSNKLIFSEKEAVKD----G 190 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEI 241 + E L G +V+G+V + D+G FV++ G++GL+HI++++W+RV +PS+ V G I Sbjct: 191 LAERFEKLAVGDQVEGVVTGVVDFGVFVNVEGIEGLVHISEISWERVNNPSDYVKTGQTI 250 Query: 242 TVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVE 301 K++ D++ R+SL +KQL +DPW+ + + +G K+ G VT +T +G FV++ +E Sbjct: 251 KAKIIAIDKD--RLSLSMKQLTQDPWLTEVQNFSKGDKVEGTVTRITPFGAFVQVSPAIE 308 Query: 302 GLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN 352 LVH+SE+ +N P KV + + E ++LDID+E R+ISL L + Sbjct: 309 ALVHISELGDSNNV-DPEKVFTLNERKEFVILDIDKENRKISLSLGESNKK 358 Score = 228 bits (581), Expect = 6e-58, Method: Composition-based stats. Identities = 96/359 (26%), Positives = 167/359 (46%), Gaps = 22/359 (6%) Query: 172 AVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKH 230 + E A D + L G V G V +L + +DLG G + ++ + R Sbjct: 5 KITMDELLAGADTSAKQLVAGEVVTGKVLSLKKHEVLIDLGAQGVGFVPRREVGFSR--- 61 Query: 231 PSEIVNVGDEITVKVLKFDRERTRVSLGL-KQLGEDPWVAIAKRYPEGTKLTGRVTNLTD 289 ++ GDE++ V+ + E L L K + + W ++ R G + + + Sbjct: 62 ---NISEGDEVSASVVDTELENGMSLLSLRKAVKDRGWEEVSARLESGEVIDIQPYDANR 118 Query: 290 YGCFVEIEEGVEGLVHVSEMDWTNK----NIHPSKVVN-----VGDVVEVMVLDIDEERR 340 G VE EGV G + VS++ + + +++ +G ++V +LD D + Sbjct: 119 GGLLVE-YEGVRGFLPVSQLSAEHYPRVGSSDKDEILQRLNNLIGKTMKVRILDADRKSN 177 Query: 341 RISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNV 400 ++ K+ + + E GD+VEG + + DFG+F+ ++ GI+GLVH+S+ISW Sbjct: 178 KLIFSEKEAVKDGLAERFEKLAVGDQVEGVVTGVVDFGVFVNVE-GIEGLVHISEISWER 236 Query: 401 AGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTA 460 K G I A ++ +D + R+SL +KQL +DP+ V KG V G VT Sbjct: 237 VN-NPSDYVKTGQTIKAKIIAIDKD--RLSLSMKQLTQDPWLTEVQNFSKGDKVEGTVTR 293 Query: 461 VDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSV 519 + GA V+++ +E + SE D V ++ + E +D++NR ISLS+ Sbjct: 294 ITPFGAFVQVSPAIEALVHISELGDSNNVDPEKVFTLNERKEFVILDIDKENRKISLSL 352 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 53/281 (18%), Positives = 114/281 (40%), Gaps = 21/281 (7%) Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDID 336 G +TG+V +L + +++ G V E+ ++ + GD V V+D + Sbjct: 25 GEVVTGKVLSLKKHEVLIDLGAQGVGFVPRREVGFSRNI-------SEGDEVSASVVDTE 77 Query: 337 EERRRISLGLKQCKANP-WQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSD 395 E L L++ + W++ + G+ ++ + G+ + + G+ G + +S Sbjct: 78 LENGMSLLSLRKAVKDRGWEEVSARLESGEVIDIQPYDANRGGLLVEYE-GVRGFLPVSQ 136 Query: 396 ISWNVAG-------EEAVREYK--KGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVA 446 +S +E ++ G + +L D + ++ K+ +D Sbjct: 137 LSAEHYPRVGSSDKDEILQRLNNLIGKTMKVRILDADRKSNKLIFSEKEAVKDGLAERFE 196 Query: 447 LNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFT 506 G V G VT V G V + +G+EG + SE S +RV + + + G ++AK Sbjct: 197 KLAVGDQVEGVVTGVVDFGVFVNV-EGIEGLVHISEISWERVNNPSDYVKTGQTIKAKII 255 Query: 507 GVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAM 547 +D+ +SLS++ + + +K + + + Sbjct: 256 AIDKD--RLSLSMKQLTQDPWLTEVQNFSKGDKVEGTVTRI 294 Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 58/160 (36%), Gaps = 10/160 (6%) Query: 13 LKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA---QGELEIQVGDEVD 69 + + G V GVV + V V+ E + + ++ G + Sbjct: 193 ERFEKLAVGDQVEGVVTGVVDFGVFVNV-EGIEGLVHISEISWERVNNPSDYVKTGQTIK 251 Query: 70 VALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIR 128 + A++ LS ++ + W+T + + + V G + G V+++ I Sbjct: 252 AKIIAIDKD--RLSLSMKQLTQDP-WLTEVQNFSKGDKVEGTVTRITPFGAFVQVSPAIE 308 Query: 129 AFLPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNV 166 A + S + D + + EF ++ +D++ + Sbjct: 309 ALVHISELGDSNNVDPEKVFTLNERKEFVILDIDKENRKI 348 >UniRef50_C3XPK3 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3XPK3_BRAFL Length = 1638 Score = 257 bits (658), Expect = 6e-67, Method: Composition-based stats. Identities = 104/553 (18%), Positives = 201/553 (36%), Gaps = 31/553 (5%) Query: 20 PGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGF 79 PG++V V ++ +L + L ++ + E + G V + + Sbjct: 198 PGTLVEATVTSVQNHGILAEF-LGFTGSVSRVHLPTKRAE-PYRKGQRVKACILYIHPTT 255 Query: 80 GETLLSREKAKRHEAWITLEKAYEDAETV--TGVINGKVKG-GFTVELN-GIRAFLPGSL 135 LS + + + TV + G G T++L+ F S Sbjct: 256 KTVGLSFQSRLWDGRTLVDVQELPAIGTVYKKAPVVHVWSGIGVTMKLSAETPGFAAVSQ 315 Query: 136 VDVRPVRDTLH--LEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGM 193 + +PV + G + +VI +VS + + + L++L+ G Sbjct: 316 LSDQPVESIENTFKPGTQHSCRVINCSPLDGQAIVSLKKSVIEQPFL----RLQDLKPGQ 371 Query: 194 EVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRER 252 V+G + ++ YG V L V G++ +A +K+P++ N GD I +VL Sbjct: 372 VVEGKITSVQSYGITVSLSNYVRGVVSKIHLADIILKNPAKKFNEGDMIKCRVLNVATAG 431 Query: 253 TRVSLGLKQLGEDPWVAIAKRY---PEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEM 309 +++L K+ + I Y GT G V ++ D+GC V V+GL+ EM Sbjct: 432 RQLALTHKRTLLTSKLPIMASYQAAKPGTWAHGFVLSVQDFGCIVMFYNNVKGLLPKREM 491 Query: 310 DWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEG 369 + P K+ G VV+ V+ + ++++ LK A G V Sbjct: 492 TQEAQ-EDPRKMFYKGQVVKCRVMSCNPALEKLTVSLKP--EKSGTPVAADFEVGKMVNV 548 Query: 370 KIKSITDFGIFIGLDG-GIDGLVHLSDISWNVAGEEAV-REYKKGDEIAAVVLQVDAERE 427 ++ + + + + G G + + +S + + Y GD I + Sbjct: 549 EVTEVKPDSLGVKVQGSDTPGFLPMMHLSDHQENCSLLLSRYSVGDVIQDAMYCCSRATG 608 Query: 428 RISLGVKQLAED-----PFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASE 482 + + +K + + + ++ G V V G VE G G ++ Sbjct: 609 SM-VTLKPSLKKAVTSGQVVETFSDLRTDRVLRGWVRTVKPFGVFVEFPGGWVGLAPKAD 667 Query: 483 AS--RDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRA--KDEADEKDAIATVNKQE 538 + + L+VGD + +D N +S+R+ ++A E I E Sbjct: 668 LTAVASKTHCQGTNLNVGDSTSVRILHLDIPNNIAEVSLRSDLLEQATEGKKIKMKKGGE 727 Query: 539 DANFSNNAMAEAF 551 + +A A+ Sbjct: 728 FSCTVLDAKAKYL 740 Score = 201 bits (511), Expect = 6e-50, Method: Composition-based stats. Identities = 68/364 (18%), Positives = 136/364 (37%), Gaps = 13/364 (3%) Query: 165 NVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMA 224 N+ VS + ++ + D L+ L G V+ V ++ ++G + G G + + Sbjct: 172 NLTVSPTLLQKAVAKEDLDLTLDTLTPGTLVEATVTSVQNHGILAEFLGFTGSVSRVHLP 231 Query: 225 WKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGL--KQLGEDPWVAIAKRYPEGTKLT- 281 KR +E G + +L V L + V + + GT Sbjct: 232 TKR----AEPYRKGQRVKACILYIHPTTKTVGLSFQSRLWDGRTLVDVQELPAIGTVYKK 287 Query: 282 GRVTNL-TDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERR 340 V ++ + G +++ G VS++ G V++ Sbjct: 288 APVVHVWSGIGVTMKLSAETPGFAAVSQLSD-QPVESIENTFKPGTQHSCRVINCSPLDG 346 Query: 341 RISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNV 400 + + LK+ + G VEGKI S+ +GI + L + G+V ++ + Sbjct: 347 QAIVSLKKSVIEQPFLRLQDLKPGQVVEGKITSVQSYGITVSLSNYVRGVVSKIHLAD-I 405 Query: 401 AGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQL---AEDPFNNWVALNKKGAIVTGK 457 + +++ +GD I VL V +++L K+ ++ P K G G Sbjct: 406 ILKNPAKKFNEGDMIKCRVLNVATAGRQLALTHKRTLLTSKLPIMASYQAAKPGTWAHGF 465 Query: 458 VTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISL 517 V +V G V + V+G L E +++ ED + G V+ + + +++ Sbjct: 466 VLSVQDFGCIVMFYNNVKGLLPKREMTQEAQEDPRKMFYKGQVVKCRVMSCNPALEKLTV 525 Query: 518 SVRA 521 S++ Sbjct: 526 SLKP 529 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 77/470 (16%), Positives = 167/470 (35%), Gaps = 22/470 (4%) Query: 46 SAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGFGETLLS-----REKAKRHEAWITLEK 100 P + K +++ + + +V G L+ +KA E Sbjct: 135 GISPFQGLKYKMYTAPMRLAQPLLCLVRSVVSGGRSVNLTVSPTLLQKAVAKEDLDLTLD 194 Query: 101 AYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLD 160 V + G E G + + + G+ ++ ++ + Sbjct: 195 TLTPGTLVEATVTSVQNHGILAEFLGFTGSVSRVHLPTKRAEPYRK--GQRVKACILYIH 252 Query: 161 QKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKG--IVKNLTDYGAFVDLGG-VDGL 217 V +S ++ + + Q E G K +V + G + L G Sbjct: 253 PTTKTVGLSFQSRLWDGRTLVDVQ--ELPAIGTVYKKAPVVHVWSGIGVTMKLSAETPGF 310 Query: 218 LHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEG 277 ++ ++ + V+ G + + +V+ + + LK+ + + G Sbjct: 311 AAVSQLSDQPVESIENTFKPGTQHSCRVINCSPLDGQAIVSLKKSVIEQPFLRLQDLKPG 370 Query: 278 TKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDE 337 + G++T++ YG V + V G+V + +P+K N GD+++ VL++ Sbjct: 371 QVVEGKITSVQSYGITVSLSNYVRGVVSKIHLAD-IILKNPAKKFNEGDMIKCRVLNVAT 429 Query: 338 ERRRISLGLKQCKANPWQQFAETH---NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLS 394 R+++L K+ ++ G G + S+ DFG + + GL+ Sbjct: 430 AGRQLALTHKRTLLTSKLPIMASYQAAKPGTWAHGFVLSVQDFGCIVMFYNNVKGLLPKR 489 Query: 395 DISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIV 454 +++ A E+ + + KG + V+ + E++++ +K E A + G +V Sbjct: 490 EMT-QEAQEDPRKMFYKGQVVKCRVMSCNPALEKLTVSLKP--EKSGTPVAADFEVGKMV 546 Query: 455 TGKVTAVDAKGATVELAD-GVEGYLRASEASRDRVED--ATLVLSVGDEV 501 +VT V V++ G+L S + SVGD + Sbjct: 547 NVEVTEVKPDSLGVKVQGSDTPGFLPMMHLSDHQENCSLLLSRYSVGDVI 596 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 90/571 (15%), Positives = 173/571 (30%), Gaps = 73/571 (12%) Query: 12 SLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQGELEIQVGDEV 68 L+ + +PG +V G + ++ + V + + + GD + Sbjct: 361 FLRLQDLKPGQVVEGKITSVQSYGITVSLSNYVRGVVSKIHLADIILKNPAKKFNEGDMI 420 Query: 69 DVALDAVEDGFGETLLSREK--AKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL-N 125 + V + L+ ++ + +A + G + G V N Sbjct: 421 KCRVLNVATAGRQLALTHKRTLLTSKLPIMASYQAAKPGTWAHGFVLSVQDFGCIVMFYN 480 Query: 126 GIRAFLPGSLVDVRPVRDTLH--LEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERD 183 ++ LP + D +G+ ++ +V+ + + VS + Sbjct: 481 NVKGLLPKREMTQEAQEDPRKMFYKGQVVKCRVMSCNPALEKLTVSLKP------EKSGT 534 Query: 184 QLLENLQEGMEVKGIVKNLTDYGAFVDLGGVD--GLLHITDMAWKRVKH--PSEIVNVGD 239 + + + G V V + V + G D G L + ++ + +VGD Sbjct: 535 PVAADFEVGKMVNVEVTEVKPDSLGVKVQGSDTPGFLPMMHLSDHQENCSLLLSRYSVGD 594 Query: 240 EIT-VKVLKFDRERTRVSL--GL-KQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVE 295 I + V+L L K + V L G V + +G FVE Sbjct: 595 VIQDAMYCCSRATGSMVTLKPSLKKAVTSGQVVETFSDLRTDRVLRGWVRTVKPFGVFVE 654 Query: 296 IEEGVEGLVHVSEMDWTNKNIHPS-KVVNVGDVVEVMVLDIDEERRRISLGLK-QCKANP 353 G GL +++ H +NVGD V +L +D + L+ Sbjct: 655 FPGGWVGLAPKADLTAVASKTHCQGTNLNVGDSTSVRILHLDIPNNIAEVSLRSDLLEQA 714 Query: 354 WQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVRE----Y 409 + KG + + + GI+G L+ ++ Sbjct: 715 TEGKKIKMKKGGEFSCTVLDAKAKYLLV----GINGSGALAYVTRKWHPNHGSNVGMGDA 770 Query: 410 KKGDEIAAVVLQV---------------------------------DAERERISLGVKQL 436 + G+ V+++ + +R+R ++ Sbjct: 771 QIGETSKVRVVRITQSGSVIAMPAGKKTEGKKEGAEHKAAKRREEKNRKRKRDESETREE 830 Query: 437 AEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELAD---GVEGYLRASEASRD--RVEDA 491 E N + GAIV V A V++ EG + SE D E Sbjct: 831 TEADGQNPAEQLQLGAIVNVVVVATARDHLEVKITGQGHRQEGIVHISEVKDDVREGEAP 890 Query: 492 TLVLSVGDEVEAKFTGVDRKNRAISLSVRAK 522 L VG V + G+ K S+++ Sbjct: 891 MAKLLVGSIVPGRVIGISHKKVK---SLKSL 918 Score = 148 bits (374), Expect = 6e-34, Method: Composition-based stats. Identities = 92/599 (15%), Positives = 184/599 (30%), Gaps = 103/599 (17%) Query: 13 LKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL-----EIQVGDE 67 + R ++RG V + V V+ P + + VGD Sbjct: 628 ETFSDLRTDRVLRGWVRTVKPFGVFVEFPGGWVGLAPKADLTAVASKTHCQGTNLNVGDS 687 Query: 68 VDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGI 127 V + ++ +S +A + + + + V +NG Sbjct: 688 TSVRILHLDIPNNIAEVSLRSDLLEQATEGKKIKMKKGGEFSCTVLDAKAKYLLVGINGS 747 Query: 128 RAFL---------PGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSR-------R 171 A GS V + G+ + +V+++ Q + + + + Sbjct: 748 GALAYVTRKWHPNHGSNVGMG-----DAQIGETSKVRVVRITQSGSVIAMPAGKKTEGKK 802 Query: 172 AVIESENSAERDQLL----------------------ENLQEGMEVKGIVKNLTDYGAFV 209 E + + R++ E LQ G V +V V Sbjct: 803 EGAEHKAAKRREEKNRKRKRDESETREETEADGQNPAEQLQLGAIVNVVVVATARDHLEV 862 Query: 210 DLGGV----DGLLHITDMAWK--RVKHPSEIVNVGDEITVKVLKFDRERTR--------- 254 + G +G++HI+++ + P + VG + +V+ ++ + Sbjct: 863 KITGQGHRQEGIVHISEVKDDVREGEAPMAKLLVGSIVPGRVIGISHKKVKSLKSLPFSR 922 Query: 255 -------VSLGL-----------KQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI 296 ++ L K+ Y E K+ + ++ D V + Sbjct: 923 PGFEEVVYNVSLRESVVKADDKFKKFLLPDEKLRTDVYKEDQKVMFYLQSIQDSHVHVSV 982 Query: 297 EEGVEGLVHVSEMDWTNKN-IHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQ 355 GV+G + + ++ +P + + ID E + L Sbjct: 983 SPGVQGKLDLLSCSDNVEDLKNPPAMFKPKCAYLGTITSIDRESSTLHLSRLG------- 1035 Query: 356 QFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEI 415 A G V ++ + + L G G +L+D+S + + +K + Sbjct: 1036 -KATKLAPGLVVNAQVAKKVPGKLLLSLPFGGKGFANLTDLSDSY-SSNPLSTFKVNQLL 1093 Query: 416 AAVVLQVDAERERISLGVKQLA--------EDPFNNWVALNKKGAIVTGKVTAVDAKGAT 467 VL+ + + + ++ DP V +G IV G V + G Sbjct: 1094 RCCVLECS-SKRHVRVSLRPSKIGGKVRKINDPDYETVEDIVEGDIVRGYVEDCNKHGVF 1152 Query: 468 VELADGVEGYLRASEASRDRVED---ATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKD 523 L+ V+G ++ A+ V VG V AK V K+ + LS+ KD Sbjct: 1153 AALSHKVKGRVQYKHATSYFVRKQDELKKFFPVGKLVTAKVLEVSYKSSHLELSLLEKD 1211 Score = 125 bits (315), Expect = 4e-27, Method: Composition-based stats. Identities = 49/317 (15%), Positives = 111/317 (35%), Gaps = 17/317 (5%) Query: 239 DEITVKVLKFDRERTRVSLGL------KQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGC 292 + V V+L + K + ++ GT + VT++ ++G Sbjct: 155 QPLLCLVRSVVSGGRSVNLTVSPTLLQKAVAKEDLDLTLDTLTPGTLVEATVTSVQNHGI 214 Query: 293 FVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQ--CK 350 E G G V + ++ G V+ +L I + + L + Sbjct: 215 LAEFL-GFTGSVSRVHLPTKR-----AEPYRKGQRVKACILYIHPTTKTVGLSFQSRLWD 268 Query: 351 ANPWQQFAETHNKGDRVE-GKIKSITDF-GIFIGLDGGIDGLVHLSDISWNVAGEEAVRE 408 E G + + + G+ + L G +S +S E Sbjct: 269 GRTLVDVQELPAIGTVYKKAPVVHVWSGIGVTMKLSAETPGFAAVSQLSDQPV-ESIENT 327 Query: 409 YKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATV 468 +K G + + V+ + + +K+ + + K G +V GK+T+V + G TV Sbjct: 328 FKPGTQHSCRVINCSPLDGQAIVSLKKSVIEQPFLRLQDLKPGQVVEGKITSVQSYGITV 387 Query: 469 ELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEK 528 L++ V G + + +++ + GD ++ + V R ++L+ + + Sbjct: 388 SLSNYVRGVVSKIHLADIILKNPAKKFNEGDMIKCRVLNVATAGRQLALTHKRTLLTSKL 447 Query: 529 DAIATVNKQEDANFSNN 545 +A+ + +++ Sbjct: 448 PIMASYQAAKPGTWAHG 464 Score = 111 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 84/617 (13%), Positives = 178/617 (28%), Gaps = 101/617 (16%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDA-GLKSESAIPAEQFKNAQGE-----LEIQVGDEVDV 70 + G +V V + D + V G + +P + Q VGD + Sbjct: 539 DFEVGKMVNVEVTEVKPDSLGVKVQGSDTPGFLPMMHLSDHQENCSLLLSRYSVGDVIQD 598 Query: 71 ALDAVEDGFGETLLSREKAKRHEAWITLEKAY---EDAETVTGVINGKVKGGFTVEL-NG 126 A+ G + + K+ + + + + G + G VE G Sbjct: 599 AMYCCSRATGSMVTLKPSLKKAVTSGQVVETFSDLRTDRVLRGWVRTVKPFGVFVEFPGG 658 Query: 127 IRAFLPGSLV----DVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 P + + + T G +++ LD N VS R+ + + + + Sbjct: 659 WVGLAPKADLTAVASKTHCQGTNLNVGDSTSVRILHLDIPNNIAEVSLRSDLLEQATEGK 718 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLL------HITDMAWKRVKHPSEIVN 236 ++ E V + V + G L H + + Sbjct: 719 KIKMKKGGE---FSCTVLDAKAKYLLVGINGSGALAYVTRKWHPNHGSNVGMGDA----Q 771 Query: 237 VGDEITVKVLKF---------------------------------DRERTRVSLGLKQLG 263 +G+ V+V++ +R+R R ++ Sbjct: 772 IGETSKVRVVRITQSGSVIAMPAGKKTEGKKEGAEHKAAKRREEKNRKRKRDESETREET 831 Query: 264 EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI---EEGVEGLVHVSEMDWT-NKNIHPS 319 E A++ G + V V+I EG+VH+SE+ + P Sbjct: 832 EADGQNPAEQLQLGAIVNVVVVATARDHLEVKITGQGHRQEGIVHISEVKDDVREGEAPM 891 Query: 320 KVVNVGDVVEVMVLDIDEERRR----------------ISLGLKQCKANPWQQFAETHNK 363 + VG +V V+ I ++ + ++ L++ +F + Sbjct: 892 AKLLVGSIVPGRVIGISHKKVKSLKSLPFSRPGFEEVVYNVSLRESVVKADDKFKKFLLP 951 Query: 364 GDRVEGKIKS-----------ITDFGIFIGLDGGIDGLVHLSDISWNVA-GEEAVREYKK 411 +++ + I D + + + G+ G + L S NV + +K Sbjct: 952 DEKLRTDVYKEDQKVMFYLQSIQDSHVHVSVSPGVQGKLDLLSCSDNVEDLKNPPAMFKP 1011 Query: 412 GDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELA 471 + +D E + L G +V +V + L Sbjct: 1012 KCAYLGTITSIDRESSTLHLSR--------LGKATKLAPGLVVNAQVAKKVPGKLLLSLP 1063 Query: 472 DGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAI 531 G +G+ ++ S + V + R + +S+R + I Sbjct: 1064 FGGKGFANLTDLSDSYSSNPLSTFKVNQLLRCCVLECSS-KRHVRVSLRPSKIGGKVRKI 1122 Query: 532 ATVNKQEDANFSNNAMA 548 + + + + Sbjct: 1123 NDPDYETVEDIVEGDIV 1139 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 63/389 (16%), Positives = 119/389 (30%), Gaps = 71/389 (18%) Query: 12 SLKEIETRPGSIVRGVVVAIDKDVVLVDA---GLKSESAIPAEQFKN-----AQGELEIQ 63 + + G+IV VVVA +D + V G + E + + K+ ++ Sbjct: 836 QNPAEQLQLGAIVNVVVVATARDHLEVKITGQGHRQEGIVHISEVKDDVREGEAPMAKLL 895 Query: 64 VGDEVDVALDAVEDGFGE------------------TLLS--------REKAKRHEAWIT 97 VG V + + + L + K Sbjct: 896 VGSIVPGRVIGISHKKVKSLKSLPFSRPGFEEVVYNVSLRESVVKADDKFKKFLLPDEKL 955 Query: 98 LEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRPVRDTLHLEGKELEFK- 155 Y++ + V + V ++ G++ L + + L+ FK Sbjct: 956 RTDVYKEDQKVMFYLQSIQDSHVHVSVSPGVQGKLDL----LSCSDNVEDLKNPPAMFKP 1011 Query: 156 -------VIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAF 208 + +D++ + + +S R L G+ V V Sbjct: 1012 KCAYLGTITSIDRESSTLHLS------------RLGKATKLAPGLVVNAQVAKKVPGKLL 1059 Query: 209 VDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGE--- 264 + L G G ++TD++ +P V + VL+ + V + L+ Sbjct: 1060 LSLPFGGKGFANLTDLSDSYSSNPLSTFKVNQLLRCCVLECS-SKRHVRVSLRPSKIGGK 1118 Query: 265 -----DPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWT--NKNIH 317 DP + EG + G V + +G F + V+G V K Sbjct: 1119 VRKINDPDYETVEDIVEGDIVRGYVEDCNKHGVFAALSHKVKGRVQYKHATSYFVRKQDE 1178 Query: 318 PSKVVNVGDVVEVMVLDIDEERRRISLGL 346 K VG +V VL++ + + L L Sbjct: 1179 LKKFFPVGKLVTAKVLEVSYKSSHLELSL 1207 Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 46/274 (16%), Positives = 89/274 (32%), Gaps = 26/274 (9%) Query: 3 ESFAQLF--EESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA---- 56 + F + +E L+ + V + +I V V + + + Sbjct: 943 DKFKKFLLPDEKLRTDVYKEDQKVMFYLQSIQDSHVHVSVSPGVQGKLDLLSCSDNVEDL 1002 Query: 57 -QGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGK 115 + + +++ LSR A V + K Sbjct: 1003 KNPPAMFKPKCAYLGTITSIDRESSTLHLSRLGKATKLA---------PGLVVNAQVAKK 1053 Query: 116 VKGGFTVEL-NGIRAFLPGSLVDVRPVRDT--LHLEGKELEFKVIKLDQKRNNVVVSRRA 172 V G + L G + F + + + + L V++ KR+ V R + Sbjct: 1054 VPGKLLLSLPFGGKGFANLTDLSDSYSSNPLSTFKVNQLLRCCVLECSSKRHVRVSLRPS 1113 Query: 173 VIESENSAERD---QLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRV 228 I + D + +E++ EG V+G V++ +G F L V G + V Sbjct: 1114 KIGGKVRKINDPDYETVEDIVEGDIVRGYVEDCNKHGVFAALSHKVKGRVQYKHATSYFV 1173 Query: 229 KH---PSEIVNVGDEITVKVLKFDRERTRVSLGL 259 + + VG +T KVL+ + + + L L Sbjct: 1174 RKQDELKKFFPVGKLVTAKVLEVSYKSSHLELSL 1207 >UniRef50_Q05022 rRNA biogenesis protein RRP5 n=10 Tax=Saccharomycetaceae RepID=RRP5_YEAST Length = 1729 Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 107/593 (18%), Positives = 222/593 (37%), Gaps = 64/593 (10%) Query: 12 SLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAE---QFKNAQGELEIQVGDEV 68 + + + +I + V K + ++ + V Sbjct: 785 YDDVKDLNKDVPMHAYIKSISDKGLFVAFNGKFIGLVLPSYAVDSRDIDISKAFYINQSV 844 Query: 69 DVALDAVEDGFGETLLSREKAKRHEAWITLEKAYED--------------AETVTGVING 114 V L +D + LLS + K E +E ED V I Sbjct: 845 TVYLLRTDDKNQKFLLSLKAPKVKEEKKKVESNIEDPVDSSIKSWDDLSIGSIVKAKIKS 904 Query: 115 KVKGGFTV--------ELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIK-LDQKRNN 165 K V ++ F + + + + + ++ K+I D K + Sbjct: 905 VKKNQLNVILAANLHGRVDIAEVFDTYEEITDKKQPLSNYKKDDVIKVKIIGNHDVKSHK 964 Query: 166 VVVSRRAVI------------ESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG 213 + + E ++ + LE + G E+ G V N + ++ + Sbjct: 965 FLPITHKISKASVLELSMKPSELKSKEVHTKSLEEINIGQELTGFVNNSSGNHLWLTISP 1024 Query: 214 V-DGLLHITDMAWK---RVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVA 269 V + + D+A ++ + +G + VKV DRE V+ +G+ Sbjct: 1025 VLKARISLLDLADNDSNFSENIESVFPLGSALQVKVASIDREHGFVN----AIGKSHVDI 1080 Query: 270 IAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSE-MDWTNKNIHPSKVVNVGDVV 328 G +L GRV + + +++ V G+ +++ ++ + + + + +V+ Sbjct: 1081 NMSTIKVGDELPGRVLKIAEKYVLLDLGNKVTGISFITDALNDFSLTLKEAFEDKINNVI 1140 Query: 329 EVMVLDIDEERRRISLGLKQCKANPWQQF-AETHNKGDRVEGKIKSITDFGIFIGLDGGI 387 VL +DE+ ++I L L+ A E +G+ V+G +K++ D GIF+ L + Sbjct: 1141 PTTVLSVDEQNKKIELSLRPATAKTRSIKSHEDLKQGEIVDGIVKNVNDKGIFVYLSRKV 1200 Query: 388 DGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVAL 447 + V +S +S + +E + YK + V+ D + RISL +++ + + Sbjct: 1201 EAFVPVSKLSDSY-LKEWKKFYKPMQYVLGKVVTCDEDS-RISLTLRESEINGDLKVLKT 1258 Query: 448 N---KKGAIVTGKVTAVDAKGATVELAD--GVEGYLRASEASRDRVEDATLVLSVGDEVE 502 K G + G + +V G V+L + V G +E + + ED + + VGD V+ Sbjct: 1259 YSDIKAGDVFEGTIKSVTDFGVFVKLDNTVNVTGLAHITEIADKKPEDLSALFGVGDRVK 1318 Query: 503 AKFTGVDRKNRAISLSVRAKDEADEKD---------AIATVNKQEDANFSNNA 546 A + + + ISLS++A + E + + + K+++ +A Sbjct: 1319 AIVLKTNPEKKQISLSLKASHFSKEAELASTTTTTTTVDQLEKEDEDEVMADA 1371 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 86/602 (14%), Positives = 202/602 (33%), Gaps = 63/602 (10%) Query: 8 LFEESLKEIETRP-GSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQGELEIQ 63 L + + + ++ +P + + E ++ Sbjct: 593 LVSTYENAKNIKEKNEKTLATIQVFKPNGCIISFFGGLSGFLPNSEISEVFVKRPEEHLR 652 Query: 64 VGDEVDVALDAVEDGFGETLLSREKAKRHEA--WITLEKAYEDAETVTGVINGKVKGGFT 121 +G V V L V+ + + + + A T+E +T + K K Sbjct: 653 LGQTVIVKLLDVDADRRRIIATCKVSNEQAAQQKDTIENIVPGRTIITVHVIEKTKDSVI 712 Query: 122 VELN--GIRAFLPGSLVDVRPVRDT-----LHLEGKELEFKVIKLDQKRNNVVVSRRAVI 174 VE+ G+R + + + G EL VI D + +S ++ + Sbjct: 713 VEIPDVGLRGVIYVGHLSDSRIEQNRAQLKKLRIGTELTGLVIDKDTRTRVFNMSLKSSL 772 Query: 175 ESENSAERDQL----LENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVK 229 + E L +++L + + + +K+++D G FV G GL+ + R Sbjct: 773 IKDAKKETLPLTYDDVKDLNKDVPMHAYIKSISDKGLFVAFNGKFIGLVLPSYAVDSRDI 832 Query: 230 HPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAI---------------AKRY 274 S+ + +TV +L+ D + + L LK Sbjct: 833 DISKAFYINQSVTVYLLRTDDKNQKFLLSLKAPKVKEEKKKVESNIEDPVDSSIKSWDDL 892 Query: 275 PEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNK----NIHPSKVVNVGDVVEV 330 G+ + ++ ++ V + + G V ++E+ T + P DV++V Sbjct: 893 SIGSIVKAKIKSVKKNQLNVILAANLHGRVDIAEVFDTYEEITDKKQPLSNYKKDDVIKV 952 Query: 331 MVLD-IDEERRR-------------ISLGLKQCKANPWQQFAETHN---KGDRVEGKIKS 373 ++ D + + + L +K + + ++ G + G + + Sbjct: 953 KIIGNHDVKSHKFLPITHKISKASVLELSMKPSELKSKEVHTKSLEEINIGQELTGFVNN 1012 Query: 374 ITDFGIFIGLDGGIDGLVHLSDISWNVAG--EEAVREYKKGDEIAAVVLQVDAERERISL 431 + +++ + + + L D++ N + E + G + V +D E ++ Sbjct: 1013 SSGNHLWLTISPVLKARISLLDLADNDSNFSENIESVFPLGSALQVKVASIDREHGFVN- 1071 Query: 432 GVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDA 491 + + + ++ K G + G+V + K ++L + V G ++A D Sbjct: 1072 ---AIGKSHVDINMSTIKVGDELPGRVLKIAEKYVLLDLGNKVTGISFITDALNDFSLTL 1128 Query: 492 TLVL--SVGDEVEAKFTGVDRKNRAISLSVRAKDEADEK-DAIATVNKQEDANFSNNAMA 548 + + + VD +N+ I LS+R + + + E + + Sbjct: 1129 KEAFEDKINNVIPTTVLSVDEQNKKIELSLRPATAKTRSIKSHEDLKQGEIVDGIVKNVN 1188 Query: 549 EA 550 + Sbjct: 1189 DK 1190 Score = 164 bits (416), Expect = 8e-39, Method: Composition-based stats. Identities = 85/542 (15%), Positives = 182/542 (33%), Gaps = 54/542 (9%) Query: 20 PGSIVRGVVVAIDKDVVLVDAGLKSESAI---PAEQFKNAQGELEIQVGDEVDVALDA-V 75 PG IV + +I K+ + + F + + +G + + A + Sbjct: 337 PGQIVDLLCESITKNGIAGKVFGLVSGVVNVSHLRTFSEEDLKHKFVIGSSIRCRIIACL 396 Query: 76 EDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRA----FL 131 E+ G+ +L + LE A E + G+T E I+ +L Sbjct: 397 ENKSGDKVLILSNLPH---ILKLEDALRSTEGLDAFPI-----GYTFESCSIKGRDSEYL 448 Query: 132 PGSLVDVRPVRDTLHLEGK-----ELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLL 186 +L D R + G+ L +V+ + +S + + Sbjct: 449 YLALDDDRLGKVHSSRVGEIENSENLSSRVLGYSPVDDIYQLSTDP----KYLKLKYLRT 504 Query: 187 ENLQEGMEV-KGIVKNLTDYGAFVDL--GGVDGLLHITDMAWKRVKHPSEIVNVGDEITV 243 ++ G + + +++ G + + G + ++ R+ +P +G ++ Sbjct: 505 NDIPIGELLPSCEITSVSSSGIELKIFNGQFKASVPPLHISDTRLVYPERKFKIGSKVKG 564 Query: 244 KVLKFDRERTRVSLGLKQ----------LGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCF 293 +V+ + R V + LK+ + + K + GC Sbjct: 565 RVISVN-SRGNVHVTLKKSLVNIEDNELPLVSTYENAKNIKEKNEKTLATIQVFKPNGCI 623 Query: 294 VEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP 353 + G+ G + SE+ P + + +G V V +LD+D +RRRI K Sbjct: 624 ISFFGGLSGFLPNSEIS-EVFVKRPEEHLRLGQTVIVKLLDVDADRRRIIATCKVSNEQA 682 Query: 354 WQQFAETHNKG---DRVEGKIKSITDFGIFIGLDG-GIDGLVHLSDISWNVAGEEA--VR 407 QQ N + + T + + + G+ G++++ +S + + ++ Sbjct: 683 AQQKDTIENIVPGRTIITVHVIEKTKDSVIVEIPDVGLRGVIYVGHLSDSRIEQNRAQLK 742 Query: 408 EYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAI--------VTGKVT 459 + + G E+ +V+ D ++ +K + + + Sbjct: 743 KLRIGTELTGLVIDKDTRTRVFNMSLKSSLIKDAKKETLPLTYDDVKDLNKDVPMHAYIK 802 Query: 460 AVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSV 519 ++ KG V G + S A R D + + V D KN+ LS+ Sbjct: 803 SISDKGLFVAFNGKFIGLVLPSYAVDSRDIDISKAFYINQSVTVYLLRTDDKNQKFLLSL 862 Query: 520 RA 521 +A Sbjct: 863 KA 864 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 90/559 (16%), Positives = 185/559 (33%), Gaps = 42/559 (7%) Query: 15 EIETRPGSIVRGVVVAIDKDVVLVDAGL-KSESAIPAEQFKNAQGELEIQVGDEVDVALD 73 + + + ++ V +I+ +D GL I + F N ++ G + Sbjct: 250 DEDLVKSTSIQCAVKSIEDHGATLDVGLPGFTGFIAKKDFGNF---EKLLPGAVFLGNIT 306 Query: 74 AVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNG-IRAFLP 132 D K I+ A + V + K G ++ G + + Sbjct: 307 KKSDRSIVVNTDFSDKKNKITQISSIDAIIPGQIVDLLCESITKNGIAGKVFGLVSGVVN 366 Query: 133 GSLVDVRPVRDTLHL--EGKELEFKVIKL----DQKRNNVVVSRRAVIESENSAERDQLL 186 S + D H G + ++I + ++ + +++ E++ + L Sbjct: 367 VSHLRTFSEEDLKHKFVIGSSIRCRIIACLENKSGDKVLILSNLPHILKLEDALRSTEGL 426 Query: 187 ENLQEGMEVK-GIVKNLTDYGAFVDLGGVD-GLLHITDMAWKRVKHPSEIVNVGDEITVK 244 + G + +K ++ L G +H + RV + ++ + Sbjct: 427 DAFPIGYTFESCSIKGRDSEYLYLALDDDRLGKVHSS-----RVGEIENS----ENLSSR 477 Query: 245 VLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKL-TGRVTNLTDYGCFVEIEEGV-EG 302 VL + L P G L + +T+++ G ++I G + Sbjct: 478 VLGYSPVDDIYQLSTDPKYLKLKYLRTNDIPIGELLPSCEITSVSSSGIELKIFNGQFKA 537 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERR---RISLGLKQCKANP------ 353 V + T P + +G V+ V+ ++ + L + N Sbjct: 538 SVPPLHISDTRLVY-PERKFKIGSKVKGRVISVNSRGNVHVTLKKSLVNIEDNELPLVST 596 Query: 354 WQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGD 413 ++ K ++ I+ G I GG+ G + S+IS V + + G Sbjct: 597 YENAKNIKEKNEKTLATIQVFKPNGCIISFFGGLSGFLPNSEIS-EVFVKRPEEHLRLGQ 655 Query: 414 EIAAVVLQVDAERERISLGVKQLAED--PFNNWVALNKKG-AIVTGKVTAVDAKGATVEL 470 + +L VDA+R RI K E + + G I+T V VE+ Sbjct: 656 TVIVKLLDVDADRRRIIATCKVSNEQAAQQKDTIENIVPGRTIITVHVIEKTKDSVIVEI 715 Query: 471 AD-GVEGYLRASEASRDRVEDAT---LVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEAD 526 D G+ G + S R+E L +G E+ D + R ++S+++ D Sbjct: 716 PDVGLRGVIYVGHLSDSRIEQNRAQLKKLRIGTELTGLVIDKDTRTRVFNMSLKSSLIKD 775 Query: 527 EKDAIATVNKQEDANFSNN 545 K + + + + + Sbjct: 776 AKKETLPLTYDDVKDLNKD 794 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 85/630 (13%), Positives = 176/630 (27%), Gaps = 96/630 (15%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN------ 55 ++ E + + GS + G + AI K + + + Sbjct: 100 SDEARAGLIEHVNFKTLKNGSSLLGQISAITKQDLCITFTDGISGYVNLTHISEEFTSIL 159 Query: 56 ------------------------------------------AQGELEIQVGDEVDVALD 73 +G + ++ Sbjct: 160 EDLDEDMDSDTDAADEKKSKVEDAEYESSDDEDEKLDKSNELPNLRRYFHIGQWLRCSVI 219 Query: 74 AVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGV-----INGKVKGGFTVELN--G 126 T S++K + Y D + V + G T+++ G Sbjct: 220 KNTSLEPSTKKSKKKRIELTIEPSSVNIYADEDLVKSTSIQCAVKSIEDHGATLDVGLPG 279 Query: 127 IRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLL 186 F+ D L G + K K + +V + +N + + Sbjct: 280 FTGFIAKK--DFGNFEKL--LPGAVFLGNITK---KSDRSIVVNTDFSDKKNKITQISSI 332 Query: 187 ENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEITVKV 245 + + G V + +++T G + G V G+++++ + + +G I ++ Sbjct: 333 DAIIPGQIVDLLCESITKNGIAGKVFGLVSGVVNVSHLRTFSEEDLKHKFVIGSSIRCRI 392 Query: 246 LKFDRER---TRVSLG-----LKQLGEDPWVAIAKRYPEGTKLT-GRVTNLTDYGCFVEI 296 + + + L LK +P G + ++ + Sbjct: 393 IACLENKSGDKVLILSNLPHILKLEDALRSTEGLDAFPIGYTFESCSIKGRDSEYLYLAL 452 Query: 297 EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQ 356 ++ G VH S + + + S VL L Sbjct: 453 DDDRLGKVHSSRVGEIENSENLSS----------RVLGYSPVDDIYQLSTDPKYLKLKYL 502 Query: 357 FAETHNKGDRV-EGKIKSITDFGIFIGLDGGI-DGLVHLSDISWNVAGEEAVREYKKGDE 414 G+ + +I S++ GI + + G V IS R++K G + Sbjct: 503 RTNDIPIGELLPSCEITSVSSSGIELKIFNGQFKASVPPLHISDTRLV-YPERKFKIGSK 561 Query: 415 IAAVVLQVDAERERISLGVKQ----------LAEDPFNNWVALNKKGAIVTGKVTAVDAK 464 + V+ V+ R + + +K+ + N + +K + Sbjct: 562 VKGRVISVN-SRGNVHVTLKKSLVNIEDNELPLVSTYENAKNIKEKNEKTLATIQVFKPN 620 Query: 465 GATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDE 524 G + G+ G+L SE S V+ L +G V K VD R I + + +E Sbjct: 621 GCIISFFGGLSGFLPNSEISEVFVKRPEEHLRLGQTVIVKLLDVDADRRRIIATCKVSNE 680 Query: 525 ADEKDAIATVNKQEDANFSNNAMAEAFKAA 554 + N + E K + Sbjct: 681 QAAQQKDTIENIVPGRTIITVHVIEKTKDS 710 >UniRef50_Q0UD83 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum RepID=Q0UD83_PHANO Length = 1794 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 103/569 (18%), Positives = 189/569 (33%), Gaps = 65/569 (11%) Query: 14 KEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ---GELEIQVGDEVDV 70 E G IV G V I D V V+ G A+ Q ++ + Sbjct: 821 NVEELTSGEIVHGFVRGILPDKVFVEFGNGVSGAVFKSQMTEEILTAPNFGLRKDQSMTC 880 Query: 71 ALDAVEDGFGETLLSRE--------------------KAKRHEAWITLEKAYEDAETVTG 110 + V+ G LS + ++ IT + Sbjct: 881 RITYVDPTNGMFWLSMKLEPETNESAAPTPTAPTGTAMTAPVDSKITNTDEINFGTELKV 940 Query: 111 VINGKVKGGFTVEL-NGIRAFLPGSL-------VDVRPVRDTLHLEGKELEFKVIKLD-- 160 I VEL ++ + S + + + ++ KV+ Sbjct: 941 RIRSIKSTQINVELAENVQGRISVSELFDSWDDIPDKKRPTAHFQMNQTIKAKVLGRHDA 1000 Query: 161 QKRNNVVVSRR-----------AVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFV 209 + + ++ R A E S L+ + EG V N+ D +V Sbjct: 1001 RNHRFLPITHRSSNKTPTFDLTAKNEKLKSEGDVLSLDKVTEGSSYVAFVNNIADRYVWV 1060 Query: 210 DLG-GVDGLLHITDMAWK--RVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDP 266 +L V G + D+ ++ E VG + V+V D R+ L Sbjct: 1061 NLSANVRGRVDFLDLTDDLEQLSAVEENFPVGSALKVRVKAVDIAAGRLDLTA-ASTVTG 1119 Query: 267 WVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGD 326 G L RVT + D V++ E + + + + PS+ GD Sbjct: 1120 KTLSLADLKVGYVLPARVTKIHDASIVVQVNENIAAPIFLERLADDYDKAKPSE-YKQGD 1178 Query: 327 VVEVMVLDIDEERRRISLGLKQCK--------ANPWQQFAETHNKGDRVEGKIKSITDFG 378 V+ V V+++D +++ L + K +P + V G IK I D G Sbjct: 1179 VLRVCVIEVDIPNKKLGLSARPSKVLSSTLPVKDPIIEDKAQLKVHQVVRGFIKKIADNG 1238 Query: 379 IFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAE 438 +++ L ++ V +S++S + ++ + + ++ ++ + +K Sbjct: 1239 VYVRLGPHVETYVRVSNLSDSYI-KDWKSAFHVDQLVTGKIISNKEDQRNAQMTLKTSTI 1297 Query: 439 DPFNNWVALN---KKGAIVTGKVTAVDAKGAT--VELADGVEGYLRASEASRDRV--EDA 491 + K G IVT KV V G V+ ++ V G S+ + V + Sbjct: 1298 QGNYVEILEFGDMKAGQIVTAKVRKVAEFGVFLVVDNSNNVSGLCHVSKLADKPVAKDKI 1357 Query: 492 TLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 + GD V+AK V+ R I+ S++ Sbjct: 1358 KDMYKEGDIVKAKVVSVNPTARRINFSLK 1386 Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats. Identities = 91/517 (17%), Positives = 178/517 (34%), Gaps = 46/517 (8%) Query: 57 QGELEIQVGDEVDVALD-----------AVEDGFGETLLSREKAKRHEAWITLEKAYEDA 105 + ++G +V + V LS + + + + Sbjct: 400 DVAQKYKIGSKVKARILFTCPDSDPARVGVSLLDHVVALSTRMSGKPKERKPALDLMPIS 459 Query: 106 ETVT-GVINGKVKG-GFTVELN--GIRAFLPGSLVDVRPVRDTLH-----LEGKELEFKV 156 + + G EL + F S + V G ++ Sbjct: 460 TIIDNAKVVKVAPALGAFFELGVRDVLGFAHISRLSDDRVDVLSEDAGAYKLGSTHRARI 519 Query: 157 IKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNL--TDYGA---FVDL 211 + + + +E + + +E+++ G VKG V L GA V L Sbjct: 520 VGYNSIDGLFQL----SLEQKVLDQAFLRIEDIKPGEVVKGKVHKLIADKKGASAVLVHL 575 Query: 212 -GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLG---EDPW 267 G+ GL+ +A +++HP G +T +VL + R ++ L LK+ + Sbjct: 576 SDGITGLVTEMHLADVKLQHPERKFREGVAVTARVLYTEPARHQIQLTLKKSLVNSDVKP 635 Query: 268 VAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDV 327 EG+K G + N+ G V V + V+EM ++ G V Sbjct: 636 WTDYSMISEGSKGPGILVNVLKNGAKVRFYGDVTAWLPVAEMS-EAFMDDATRHFTKGQV 694 Query: 328 VEVMVLDIDEERRRISLGLKQ--CKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDG 385 V V V+ ++ + R++ + K + N G+ +G + +D + L Sbjct: 695 VNVRVISVNAKDRQMLVSCKDPAAVDPNKEAAFNALNPGNVTKGTVLEKSDDVATLDLGH 754 Query: 386 GIDGLVHLSDISWNVAGEEAV--REYKKGDEIAAVVL-------QVDAERERISLGVKQL 436 G+ G++ + ++ ++ ++ + G + +V+ +V + SL K Sbjct: 755 GVKGVLRIGHLTDGSEKKDISTMKKIRVGGTLEDLVVLNKLLRSKVVTVSNKPSL-RKDA 813 Query: 437 AEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLS 496 V G IV G V + VE +GV G + S+ + + + L Sbjct: 814 QASKLITNVEELTSGEIVHGFVRGILPDKVFVEFGNGVSGAVFKSQMTEEILTAPNFGLR 873 Query: 497 VGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIAT 533 + + T VD N LS++ + E +E A Sbjct: 874 KDQSMTCRITYVDPTNGMFWLSMKLEPETNESAAPTP 910 Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats. Identities = 92/568 (16%), Positives = 193/568 (33%), Gaps = 66/568 (11%) Query: 10 EESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVD 69 + PG++ +G V+ DV +D G + + + + +I ++ Sbjct: 722 NKEAAFNALNPGNVTKGTVLEKSDDVATLDLGHGVKGVLRIGHLTDGSEKKDISTMKKIR 781 Query: 70 V-------ALDAVEDGFGETLLSREKAKRHEAWITL----EKAYEDAETVTGVINGKVKG 118 V + +S + + R +A + + E V G + G + Sbjct: 782 VGGTLEDLVVLNKLLRSKVVTVSNKPSLRKDAQASKLITNVEELTSGEIVHGFVRGILPD 841 Query: 119 GFTVEL-NGIRAFLPGSLVDVR--PVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIE 175 VE NG+ + S + + + + + ++ +D +S + E Sbjct: 842 KVFVEFGNGVSGAVFKSQMTEEILTAPNFGLRKDQSMTCRITYVDPTNGMFWLSMKLEPE 901 Query: 176 SENSA-----------------ERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGL 217 + SA + + + G E+K ++++ V+L V G Sbjct: 902 TNESAAPTPTAPTGTAMTAPVDSKITNTDEINFGTELKVRIRSIKSTQINVELAENVQGR 961 Query: 218 LHITDM--AWKRVKH---PSEIVNVGDEITVKVLKFDRERTRVSL--GLKQLGEDPWVAI 270 + ++++ +W + P+ + I KVL R L + + P + Sbjct: 962 ISVSELFDSWDDIPDKKRPTAHFQMNQTIKAKVLGRHDARNHRFLPITHRSSNKTPTFDL 1021 Query: 271 A---------------KRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKN 315 + EG+ V N+ D +V + V G V ++ + Sbjct: 1022 TAKNEKLKSEGDVLSLDKVTEGSSYVAFVNNIADRYVWVNLSANVRGRVDFLDLTDDLEQ 1081 Query: 316 IH-PSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSI 374 + + VG ++V V +D R+ L G + ++ I Sbjct: 1082 LSAVEENFPVGSALKVRVKAVDIAAGRLDLT-AASTVTGKTLSLADLKVGYVLPARVTKI 1140 Query: 375 TDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVK 434 D I + ++ I + L ++ + + YK+GD + V++VD +++ L + Sbjct: 1141 HDASIVVQVNENIAAPIFLERLADDYDKAKPSE-YKQGDVLRVCVIEVDIPNKKLGLSAR 1199 Query: 435 Q--------LAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRD 486 +DP A K +V G + + G V L VE Y+R S S Sbjct: 1200 PSKVLSSTLPVKDPIIEDKAQLKVHQVVRGFIKKIADNGVYVRLGPHVETYVRVSNLSDS 1259 Query: 487 RVEDATLVLSVGDEVEAKFTGVDRKNRA 514 ++D V V K +++++ Sbjct: 1260 YIKDWKSAFHVDQLVTGKIIS-NKEDQR 1286 Score = 191 bits (486), Expect = 5e-47, Method: Composition-based stats. Identities = 99/596 (16%), Positives = 200/596 (33%), Gaps = 57/596 (9%) Query: 18 TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE---IQVGDEVDVALDA 74 GS G++V + K+ V + +P + A + G V+V + + Sbjct: 642 ISEGSKGPGILVNVLKNGAKVRFYGDVTAWLPVAEMSEAFMDDATRHFTKGQVVNVRVIS 701 Query: 75 VEDGFGETLL-SREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFLP 132 V + L+ ++ A A G + K T++L G++ L Sbjct: 702 VNAKDRQMLVSCKDPAAVDPNKEAAFNALNPGNVTKGTVLEKSDDVATLDLGHGVKGVLR 761 Query: 133 GSLV-DVRPVRDTLHL----EGKELEFKVI--KLDQKRNNVVVSRRAVIESENSAERDQL 185 + D +D + G LE V+ KL + + V ++ ++ + +++ Sbjct: 762 IGHLTDGSEKKDISTMKKIRVGGTLEDLVVLNKLLRSKVVTVSNKPSLRKDAQASKLITN 821 Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 +E L G V G V+ + FV+ G GV G + + M + + P+ + +T + Sbjct: 822 VEELTSGEIVHGFVRGILPDKVFVEFGNGVSGAVFKSQMTEEILTAPNFGLRKDQSMTCR 881 Query: 245 VLKFDRERTRVSLGLK---------------------QLGEDPWVAIAKRYPEGTKLTGR 283 + D L +K D + GT+L R Sbjct: 882 ITYVDPTNGMFWLSMKLEPETNESAAPTPTAPTGTAMTAPVDSKITNTDEINFGTELKVR 941 Query: 284 VTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKN----IHPSKVVNVGDVVEVMVLDIDEER 339 + ++ VE+ E V+G + VSE+ + + P+ + ++ VL + R Sbjct: 942 IRSIKSTQINVELAENVQGRISVSELFDSWDDIPDKKRPTAHFQMNQTIKAKVLGRHDAR 1001 Query: 340 RRISLGLKQCKANPWQQFAETHN-----------------KGDRVEGKIKSITDFGIFIG 382 L + +N F T +G + +I D +++ Sbjct: 1002 NHRFLPITHRSSNKTPTFDLTAKNEKLKSEGDVLSLDKVTEGSSYVAFVNNIADRYVWVN 1061 Query: 383 LDGGIDGLVHLSDISWNVAG-EEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPF 441 L + G V D++ ++ + G + V VD R+ L Sbjct: 1062 LSANVRGRVDFLDLTDDLEQLSAVEENFPVGSALKVRVKAVDIAAGRLDLTA-ASTVTGK 1120 Query: 442 NNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEV 501 +A K G ++ +VT + V++ + + + + D + GD + Sbjct: 1121 TLSLADLKVGYVLPARVTKIHDASIVVQVNENIAAPIFLERLADDYDKAKPSEYKQGDVL 1180 Query: 502 EAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAAKGE 557 VD N+ + LS R + ++ A + + F + Sbjct: 1181 RVCVIEVDIPNKKLGLSARPSKVLSSTLPVKDPIIEDKAQLKVHQVVRGFIKKIAD 1236 Score = 182 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 103/575 (17%), Positives = 207/575 (36%), Gaps = 45/575 (7%) Query: 7 QLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGL---KSESAIPAEQFKNAQGELEIQ 63 +L + L + + S+V+ VV+ + +++D GL K + +P + ++Q Sbjct: 252 KLVNKGLSKRKMPINSMVQASVVSNEDHGLVMDLGLDDSKIKGFLPKGELGPKIQHSKVQ 311 Query: 64 VGDEVDVALDAVEDGFGETLLSREKAKRHE-------AWITLEKAYEDAETVTGVINGKV 116 G + + LS + +K + V ++ Sbjct: 312 EGAVFMCLVTGLNSDGRIVKLSADHSKAGNLAKGNTLTEAPTIDVFLPGTAVDVLVADTT 371 Query: 117 KGGFTVELNGI-RAFLPGSLV-DVRPVRDT--LHLEGKELEFKVI----KLDQKRNNVVV 168 T ++ G+ A D + G +++ +++ D R V + Sbjct: 372 ASTLTGKILGLADATADAYHSGATEKGGDVAQKYKIGSKVKARILFTCPDSDPARVGVSL 431 Query: 169 SRRAVIESENS----AERDQLLENLQEGMEVK-GIVKNLTDY-GAFVDLG--GVDGLLHI 220 V S ER L+ + + V + GAF +LG V G HI Sbjct: 432 LDHVVALSTRMSGKPKERKPALDLMPISTIIDNAKVVKVAPALGAFFELGVRDVLGFAHI 491 Query: 221 TDMAWKRVKHPSE---IVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEG 277 + ++ RV SE +G +++ ++ L L+Q D + G Sbjct: 492 SRLSDDRVDVLSEDAGAYKLGSTHRARIVGYNSIDGLFQLSLEQKVLDQAFLRIEDIKPG 551 Query: 278 TKLTGRVTNL--TDYGC---FVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMV 332 + G+V L G V + +G+ GLV + K HP + G V V Sbjct: 552 EVVKGKVHKLIADKKGASAVLVHLSDGITGLVTEMHLAD-VKLQHPERKFREGVAVTARV 610 Query: 333 LDIDEERRRISLGLKQCKANPWQQFAETH---NKGDRVEGKIKSITDFGIFIGLDGGIDG 389 L + R +I L LK+ N + + ++G + G + ++ G + G + Sbjct: 611 LYTEPARHQIQLTLKKSLVNSDVKPWTDYSMISEGSKGPGILVNVLKNGAKVRFYGDVTA 670 Query: 390 LVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQL--AEDPFNNWVAL 447 + ++++S ++A R + KG + V+ V+A+ ++ + K + Sbjct: 671 WLPVAEMS-EAFMDDATRHFTKGQVVNVRVISVNAKDRQMLVSCKDPAAVDPNKEAAFNA 729 Query: 448 NKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDA---TLVLSVGDEVE-A 503 G + G V AT++L GV+G LR + + + VG +E Sbjct: 730 LNPGNVTKGTVLEKSDDVATLDLGHGVKGVLRIGHLTDGSEKKDISTMKKIRVGGTLEDL 789 Query: 504 KFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQE 538 +++ +++S + D + + N +E Sbjct: 790 VVLNKLLRSKVVTVSNKPSLRKDAQASKLITNVEE 824 Score = 121 bits (305), Expect = 5e-26, Method: Composition-based stats. Identities = 70/439 (15%), Positives = 136/439 (30%), Gaps = 38/439 (8%) Query: 148 EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGA 207 G+ + V R + + + V+ V + D+G Sbjct: 223 IGQYMRACVTATTDDSARAR-KRLELSIEPKLVNKGLSKRKMPINSMVQASVVSNEDHGL 281 Query: 208 FVDLG----GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLG----- 258 +DLG + G L ++ +++H V G V + + V L Sbjct: 282 VMDLGLDDSKIKGFLPKGELG-PKIQH--SKVQEGAVFMCLVTGLNSDGRIVKLSADHSK 338 Query: 259 ---LKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKN 315 L + + GT + V + T +I + T K Sbjct: 339 AGNLAKGNTLTEAPTIDVFLPGTAVDVLVADTTASTLTGKILGLADATADAYHSGATEKG 398 Query: 316 IHPSKVVNVGDVVEVMVL----DIDEERRRISL--------GLKQCKANPWQQFAETHNK 363 ++ +G V+ +L D D R +SL K + + Sbjct: 399 GDVAQKYKIGSKVKARILFTCPDSDPARVGVSLLDHVVALSTRMSGKPKERKPALDLMPI 458 Query: 364 GDRVE-GKIKSITDF-GIFIGLD-GGIDGLVHLSDISWNVAGEEAVRE--YKKGDEIAAV 418 ++ K+ + G F L + G H+S +S + + YK G A Sbjct: 459 STIIDNAKVVKVAPALGAFFELGVRDVLGFAHISRLSDDRVDVLSEDAGAYKLGSTHRAR 518 Query: 419 VLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVD--AKGA---TVELADG 473 ++ ++ L ++Q D + K G +V GKV + KGA V L+DG Sbjct: 519 IVGYNSIDGLFQLSLEQKVLDQAFLRIEDIKPGEVVKGKVHKLIADKKGASAVLVHLSDG 578 Query: 474 VEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIAT 533 + G + + +++ G V A+ + I L+++ + Sbjct: 579 ITGLVTEMHLADVKLQHPERKFREGVAVTARVLYTEPARHQIQLTLKKSLVNSDVKPWTD 638 Query: 534 VNKQEDANFSNNAMAEAFK 552 + + + + K Sbjct: 639 YSMISEGSKGPGILVNVLK 657 Score = 94.6 bits (234), Expect = 9e-18, Method: Composition-based stats. Identities = 67/444 (15%), Positives = 144/444 (32%), Gaps = 72/444 (16%) Query: 175 ESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVK---- 229 + + + L G + G V +++ + L + G + +T ++ K + Sbjct: 134 DEKIVRVEGLNYKKLTPGTIILGQVTDVSHQDIVLALPNNLVGYVPLTAVSDKLNERLEK 193 Query: 230 ----------------------HPSEIVNVGDEITVKVL----KFDRERTRVSLGLKQLG 263 H ++ +G + V R R R+ L ++ Sbjct: 194 LLKEEEDGADIAEDEDESFEDVHLEDMFTIGQYMRACVTATTDDSARARKRLELSIEPKL 253 Query: 264 EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE---EGVEGLVHVSEMDWTNKNIHPSK 320 + ++ ++ P + + V + D+G +++ ++G + E+ ++ Sbjct: 254 VNKGLS-KRKMPINSMVQASVVSNEDHGLVMDLGLDDSKIKGFLPKGELGPKIQHSK--- 309 Query: 321 VVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHN--------KGDRVEGKIK 372 V G V +V ++ + R + L KA + G V+ + Sbjct: 310 -VQEGAVFMCLVTGLNSDGRIVKLSADHSKAGNLAKGNTLTEAPTIDVFLPGTAVDVLVA 368 Query: 373 SITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQV--DAERERIS 430 T + + G D G + ++YK G ++ A +L D++ R+ Sbjct: 369 DTTASTLTGKILGLADATADAYHSGATEKGGDVAQKYKIGSKVKARILFTCPDSDPARVG 428 Query: 431 LGV-------------KQLAEDPFNNWVALNKKGAIVTGKVTAVDA-KGATVELAD-GVE 475 + + K P + + ++ I KV V GA EL V Sbjct: 429 VSLLDHVVALSTRMSGKPKERKPALDLMPISTI--IDNAKVVKVAPALGAFFELGVRDVL 486 Query: 476 GYLRASEASRDRVEDATL---VLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIA 532 G+ S S DRV+ + +G A+ G + + LS ++ A Sbjct: 487 GFAHISRLSDDRVDVLSEDAGAYKLGSTHRARIVGYNSIDGLFQLS---LEQKVLDQAFL 543 Query: 533 TVNKQEDANFSNNAMAEAFKAAKG 556 + + + + KG Sbjct: 544 RIEDIKPGEVVKGKVHKLIADKKG 567 Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 14/89 (15%), Positives = 29/89 (32%), Gaps = 7/89 (7%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVL--VDAGLKSESAIPAEQFKN-----AQGELEIQ 63 E L+ + + G IV V + + V VD + + + + + Sbjct: 1303 EILEFGDMKAGQIVTAKVRKVAEFGVFLVVDNSNNVSGLCHVSKLADKPVAKDKIKDMYK 1362 Query: 64 VGDEVDVALDAVEDGFGETLLSREKAKRH 92 GD V + +V S + ++ Sbjct: 1363 EGDIVKAKVVSVNPTARRINFSLKYSQVK 1391 >UniRef50_A7SBJ3 Predicted protein n=2 Tax=Nematostella vectensis RepID=A7SBJ3_NEMVE Length = 1771 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 89/559 (15%), Positives = 185/559 (33%), Gaps = 59/559 (10%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGL---------KSESAIPAEQFKNAQGELEIQVGDE 67 PG ++ G V +++ ++ G+ K + E G Sbjct: 213 NIVPGFVLPGCVSSVEDHGYVLSFGIPGKTGFLSKKKTGRVLVEGQYLNTIVESADTGRV 272 Query: 68 VDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL-NG 126 + V++D + + L V ++ G V Sbjct: 273 IRVSVDQDKIKSAMISSDMKVRFSSLLPGML---------VNTRVSQCTSSGVIVSFLEL 323 Query: 127 IRAFLPGSLV-----DVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 + + + + K + +++ ++ K V +S I Sbjct: 324 FEGSVHILHLPENGGSGENLEKLYKKKSKHV-ARILYVNPKNKVVSLSMLDSIIQ----F 378 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDL---GGVDGLLHITDMAWKRVKHPSEIVNVG 238 + E+ G + D G + G++G +H + ++ K+++ + G Sbjct: 379 KLPSFESCSIGDIFDNVTITRGDQGLGLLANVKDGLNGFVHFSQVSDKQIEKLGKKYKAG 438 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE 298 +VL + +SL K+ + + G+ + G + L +G V + + Sbjct: 439 TSHKCRVLGMNTIDGLLSLTTKKSIINKPFMRYEDIKPGSIVEGTIITLEKFGMLVSVSD 498 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFA 358 ++GLV + HP K + G VV+ VL +D +RR+ L K+ + Q Sbjct: 499 HIKGLVTNMHLAD-IILKHPEKKLTEGKVVKCRVLTVDPGQRRLHLTHKKTMVSSTLQVI 557 Query: 359 ETH---NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEI 415 + G G I S+ ++G + + GLV + E+ + G + Sbjct: 558 TQYSDAKPGTTSHGFITSVREYGCLVTFYNNVKGLVPKDQLGIQE-SEDPRGVFYLGQVL 616 Query: 416 AAVVLQVDAERERISLGVKQL----------------------AEDPFNNWVALNKKGAI 453 V+ + +++++ L +K + K G + Sbjct: 617 TCHVISCNPDQQKLKLSLKANSANKSSTQVSLQTASTSLKNAAESKTMVTNFSDIKPGMV 676 Query: 454 VTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNR 513 + G V + G VE A G+ G S + V DA +G + A+ VD + + Sbjct: 677 LPGFVKLLMGYGVFVEFAPGILGLAPNSFIANHFVSDAASHFKIGQTLVAQVNEVDAERQ 736 Query: 514 AISLSVRAKDEADEKDAIA 532 +S++ D D + Sbjct: 737 RFLVSLKQSDLNPGSDWTS 755 Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats. Identities = 96/580 (16%), Positives = 192/580 (33%), Gaps = 47/580 (8%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPA-------------------E 51 SL + G + G V + + +++ + Sbjct: 105 ASLSFKKLCEGMKLLGAVKEVGEFELIISLPNGLSGFVHILDINEKLMSALAKSSTEERI 164 Query: 52 QFKNAQGELEIQVGDEVDVAL---DAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETV 108 + V V + + + G + LS + + + + Sbjct: 165 EDSIPSLGDLFTVNSLVVCVVKELLSSKHGHRKVKLSLRPEDVNAGVTNIVPGF----VL 220 Query: 109 TGVINGKVKGGFTVELN--GIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKR-NN 165 G ++ G+ + G FL + + +EG+ L V D R Sbjct: 221 PGCVSSVEDHGYVLSFGIPGKTGFL------SKKKTGRVLVEGQYLNTIVESADTGRVIR 274 Query: 166 VVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVD-LGGVDGLLHITDMA 224 V V + + + S++ +L GM V V T G V L +G +HI + Sbjct: 275 VSVDQDKIKSAMISSDMKVRFSSLLPGMLVNTRVSQCTSSGVIVSFLELFEGSVHILHLP 334 Query: 225 W--KRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLT- 281 ++ ++ + ++L + + VSL + + + G Sbjct: 335 ENGGSGENLEKLYKKKSKHVARILYVNPKNKVVSLSMLDSIIQFKLPSFESCSIGDIFDN 394 Query: 282 GRVTNLTDY-GCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERR 340 +T G +++G+ G VH S++ K G + VL ++ Sbjct: 395 VTITRGDQGLGLLANVKDGLNGFVHFSQVSDKQ-IEKLGKKYKAGTSHKCRVLGMNTIDG 453 Query: 341 RISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNV 400 +SL K+ N E G VEG I ++ FG+ + + I GLV ++ + Sbjct: 454 LLSLTTKKSIINKPFMRYEDIKPGSIVEGTIITLEKFGMLVSVSDHIKGLVTNMHLAD-I 512 Query: 401 AGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALN---KKGAIVTGK 457 + ++ +G + VL VD + R+ L K+ + K G G Sbjct: 513 ILKHPEKKLTEGKVVKCRVLTVDPGQRRLHLTHKKTMVSSTLQVITQYSDAKPGTTSHGF 572 Query: 458 VTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISL 517 +T+V G V + V+G + + ED V +G + + + + L Sbjct: 573 ITSVREYGCLVTFYNNVKGLVPKDQLGIQESEDPRGVFYLGQVLTCHVISCNPDQQKLKL 632 Query: 518 SVRA--KDEADEKDAIATVNKQEDANFSNNAMAEAFKAAK 555 S++A +++ + ++ T + + M F K Sbjct: 633 SLKANSANKSSTQVSLQTASTSLKNAAESKTMVTNFSDIK 672 Score = 197 bits (502), Expect = 6e-49, Method: Composition-based stats. Identities = 107/633 (16%), Positives = 220/633 (34%), Gaps = 110/633 (17%) Query: 12 SLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAI---PAEQFKNAQGELEIQVGDEV 68 ++ + +PGSIV G ++ ++K +LV + + E ++ G V Sbjct: 468 FMRYEDIKPGSIVEGTIITLEKFGMLVSVSDHIKGLVTNMHLADIILKHPEKKLTEGKVV 527 Query: 69 DVALDAVEDGFGETLLSREKAKRHEAWITLEKA--YEDAETVTGVINGKVKGGFTVEL-N 125 + V+ G L+ +K + + + T G I + G V N Sbjct: 528 KCRVLTVDPGQRRLHLTHKKTMVSSTLQVITQYSDAKPGTTSHGFITSVREYGCLVTFYN 587 Query: 126 GIRAFLPGSLVDVRPVRDTLH--LEGKELEFKVIKLDQKRNNVVVSRRA----------- 172 ++ +P + ++ D G+ L VI + + + +S +A Sbjct: 588 NVKGLVPKDQLGIQESEDPRGVFYLGQVLTCHVISCNPDQQKLKLSLKANSANKSSTQVS 647 Query: 173 -------VIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMA 224 + + S +++ GM + G VK L YG FV+ G+ GL + +A Sbjct: 648 LQTASTSLKNAAESKTMVTNFSDIKPGMVLPGFVKLLMGYGVFVEFAPGILGLAPNSFIA 707 Query: 225 WKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAK------------ 272 V + +G + +V + D ER R + LKQ +P Sbjct: 708 NHFVSDAASHFKIGQTLVAQVNEVDAERQRFLVSLKQSDLNPGSDWTSATAGALLEEILS 767 Query: 273 --------------------RYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWT 312 P G+ + G+V+ + G + + +G++G V ++ Sbjct: 768 ERKHILDELASKTEDVKNLLSLPVGSCIEGKVSKVKKNGISLTLPDGLKGFV-FHQLAQG 826 Query: 313 NKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQF---AETHNKGDRVEG 369 + G+VV+ VLD+D ++ + L L Q + G V+ Sbjct: 827 VSCL-------EGEVVQGCVLDLDVKKSVVELTLLPDVVKGRQNQKNKPKQMKPGQPVDF 879 Query: 370 KIKSITDFGIFIGLD------GGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVD 423 ++ I + + L G +HL+DI + + + G + +L+ Sbjct: 880 IVQLIKAEYMVVVLPCAAFKIGYAPAKMHLNDI------RDVAKRFNVGQKYRGSILE-- 931 Query: 424 AERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEA 483 S + + N+ K G + + +V ++ V+L + G + S A Sbjct: 932 ------SSSHCIVVSECQNSSKENLKPGTVTSVEVRSIKPLQMNVQLG-QIHGRVHVSNA 984 Query: 484 SRDRV--EDATLVLSVGDEVEAKFTGV--------------DRKNRAISLSVRAKDEADE 527 + D + E +G +++AK G + LS++ + Sbjct: 985 ADDLIQGESPFKPFQMGQKIQAKILGFRDTKTHNFLPLTHRNFTRAVAELSLKPSMVSKT 1044 Query: 528 KDAI---ATVNKQEDANFSNNAMAEAFKAAKGE 557 + A ++++ +F +AF + + Sbjct: 1045 SASEVVGAVYDEKKIEDFKIGDEVQAFVKSTSD 1077 Score = 189 bits (479), Expect = 3e-46, Method: Composition-based stats. Identities = 98/609 (16%), Positives = 190/609 (31%), Gaps = 96/609 (15%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEI 62 + A E+ + GS + G V + K+ + + + + F + Sbjct: 774 DELASKTEDVKNLLSLPVGSCIEGKVSKVKKNGISLTLPDGLKGFV----FHQLAQGVSC 829 Query: 63 QVGDEVDVALDAVEDGFGETLLSR--EKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 G+ V + ++ L+ + K + K + + V I +K + Sbjct: 830 LEGEVVQGCVLDLDVKKSVVELTLLPDVVKGRQNQKNKPKQMKPGQPVD-FIVQLIKAEY 888 Query: 121 TVELNGIRAF----LPGS-LVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIE 175 V + AF P ++ G++ +++ V Sbjct: 889 MVVVLPCAAFKIGYAPAKMHLNDIRDVAKRFNVGQKYRGSILESSSHCIVV--------- 939 Query: 176 SENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRV--KHPSE 233 S ++ ENL+ G V+++ V LG + G +H+++ A + + P + Sbjct: 940 ---SECQNSSKENLKPGTVTSVEVRSIKPLQMNVQLGQIHGRVHVSNAADDLIQGESPFK 996 Query: 234 IVNVGDEITVKVLKF--------------DRERTRVSLGLKQLGEDPW-----------V 268 +G +I K+L F + R L LK Sbjct: 997 PFQMGQKIQAKILGFRDTKTHNFLPLTHRNFTRAVAELSLKPSMVSKTSASEVVGAVYDE 1056 Query: 269 AIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKN-IHPSKVVNVGDV 327 + + G ++ V + +D ++ I V G V + K H S G+ Sbjct: 1057 KKIEDFKIGDEVQAFVKSTSDNCIWMAINTLVSGRVELLHASNDVKVLRHLSSAFKPGNG 1116 Query: 328 VEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDF-GIFIGLDGG 386 VLD+D++ ++L L + ++ V G++ + G+FI L Sbjct: 1117 HTCTVLDVDKDHEVLNLSLT-------VKPDSQLSRDQIVPGRVTRVMPTSGLFIQLPLH 1169 Query: 387 IDGLVHLSDISWNVAGE---------------------EAVREYKKGDEIAAVVLQVDAE 425 GLV L+DI+ + YK + +L + Sbjct: 1170 KSGLVALTDIADHFTENPTDGYKVKQIVRWLQSQADRTNPTDGYKVKQIVRCCILSK-KD 1228 Query: 426 RERISLGVKQLAEDPFNNWVAL--------------NKKGAIVTGKVTAVDAKGATVELA 471 L ++ G IV G V+ G V L Sbjct: 1229 NGHYDLSLRPSRTTEATTQEEKDKSRTDREIGSLAALDVGDIVRGYVSCATNIGVFVSLG 1288 Query: 472 DGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAI 531 ++ ++ S V++ + VG V K ++ N I LS++ +D A Sbjct: 1289 RNIKARVQIKNLSHFYVKEWKPLFPVGKLVTGKVLSINPTNGQIELSLKGRDVGGPDPAP 1348 Query: 532 ATVNKQEDA 540 +E Sbjct: 1349 NPKQTEETG 1357 Score = 43.4 bits (101), Expect = 0.024, Method: Composition-based stats. Identities = 16/111 (14%), Positives = 33/111 (29%), Gaps = 19/111 (17%) Query: 434 KQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEAS--------- 484 K + +G + G V V + L +G+ G++ + + Sbjct: 98 KTSGNHVASLSFKKLCEGMKLLGAVKEVGEFELIISLPNGLSGFVHILDINEKLMSALAK 157 Query: 485 -------RDRVEDATLVLSVGDEVEAKFTGVDRKN---RAISLSVRAKDEA 525 D + + +V V + R + LS+R +D Sbjct: 158 SSTEERIEDSIPSLGDLFTVNSLVVCVVKELLSSKHGHRKVKLSLRPEDVN 208 >UniRef50_Q6MNP5 30S ribosomal protein S1 n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MNP5_BDEBA Length = 398 Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 112/368 (30%), Positives = 187/368 (50%), Gaps = 11/368 (2%) Query: 4 SFAQLFEESLK--EIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE 61 SF +LF +S K + + G V G +++I K+ V G ++ I + + E++ Sbjct: 19 SFEELFAQSEKGMKTKLSVGDQVHGEILSIGKEEAFVATGTPTDGMILTKDLLDENKEVK 78 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 +VGD +D + +++ G +K + + +LE A++ V G + GGF Sbjct: 79 YKVGDYIDCVVTSIKGGEVRLA---KKGSMNASTDSLEDAFDMELPVEGRVTETCNGGFR 135 Query: 122 VELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 V + G AF P S +D R V+D GK+ +F + +LD K N+VVSRR V++ + + Sbjct: 136 VSIQGKTAFCPISQIDSRFVQDANEYVGKKFDFMITQLDPKGRNIVVSRRKVLDLQKAEN 195 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDE 240 + Q G ++G + L +GAFV+L G++GL+H+++++W RV P E+V G Sbjct: 196 EGTFMLKHQPGALLEGKIVRLEKFGAFVELEAGIEGLIHVSELSWSRVHDPKEVVMAGQP 255 Query: 241 ITVKVLKFDRERTR--VSLGLKQLG--EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI 296 +TVK++K + R +SL LKQ +PW+ + +++P GT + G+V YG FV I Sbjct: 256 VTVKLIKMEEVDGRLKISLSLKQADGAGNPWMTVPQKFPVGTVVQGKVEKKETYGLFVNI 315 Query: 297 EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQ 356 GV GL+ S+ + GD V V V I E ++ISL L + + Sbjct: 316 APGVTGLLPRSKWRDSVDAAQYENK-KRGDDVTVQVDQIMFEEKKISLALPGEAEDHSWK 374 Query: 357 FAETHNKG 364 T + G Sbjct: 375 SHSTTSSG 382 Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats. Identities = 92/391 (23%), Positives = 158/391 (40%), Gaps = 25/391 (6%) Query: 172 AVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKH 230 A E + + L G +V G + ++ AFV G DG++ D+ + + Sbjct: 18 ASFEELFAQSEKGMKTKLSVGDQVHGEILSIGKEEAFVATGTPTDGMILTKDLLDENKEV 77 Query: 231 PSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDY 290 VGD I V + V L K ++ + + GRVT + Sbjct: 78 ---KYKVGDYIDCVVTSI--KGGEVRLAKKGSMNASTDSLEDAFDMELPVEGRVTETCNG 132 Query: 291 GCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC- 349 G V I+ G +S++ + ++ V G + M+ +D + R I + ++ Sbjct: 133 GFRVSIQ-GKTAFCPISQI-DSRFVQDANEYV--GKKFDFMITQLDPKGRNIVVSRRKVL 188 Query: 350 ---KANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAV 406 KA F H G +EGKI + FG F+ L+ GI+GL+H+S++SW+ + Sbjct: 189 DLQKAENEGTFMLKHQPGALLEGKIVRLEKFGAFVELEAGIEGLIHVSELSWSRVH-DPK 247 Query: 407 REYKKGDEIAAVVLQVDAERER--ISLGVKQLAE--DPFNNWVALNKKGAIVTGKVTAVD 462 G + +++++ R ISL +KQ +P+ G +V GKV + Sbjct: 248 EVVMAGQPVTVKLIKMEEVDGRLKISLSLKQADGAGNPWMTVPQKFPVGTVVQGKVEKKE 307 Query: 463 AKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAK 522 G V +A GV G L S+ GD+V + + + + ISL++ + Sbjct: 308 TYGLFVNIAPGVTGLLPRSKWRDSVDAAQYENKKRGDDVTVQVDQIMFEEKKISLALPGE 367 Query: 523 DEADEKDAIATVNKQEDANFSNNAMAEAFKA 553 E + +T + AMAEA K Sbjct: 368 AEDHSWKSHSTTSS------GLGAMAEALKG 392 Score = 79.2 bits (194), Expect = 4e-13, Method: Composition-based stats. Identities = 45/222 (20%), Positives = 80/222 (36%), Gaps = 10/222 (4%) Query: 332 VLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLV 391 + D + ++ A + + GD+V G+I SI F+ DG++ Sbjct: 6 IFGDDINETKDFASFEELFAQSEKGMKTKLSVGDQVHGEILSIGKEEAFVATGTPTDGMI 65 Query: 392 HLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKG 451 ++ ++ E +YK GD I VV + + + L K ++ Sbjct: 66 ----LTKDLLDENKEVKYKVGDYIDCVVTSI--KGGEVRLAKKGSMNASTDSLEDAFDME 119 Query: 452 AIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRK 511 V G+VT G V + G + S+ V+DA VG + + T +D K Sbjct: 120 LPVEGRVTETCNGGFRVSIQ-GKTAFCPISQIDSRFVQDANEY--VGKKFDFMITQLDPK 176 Query: 512 NRAISLSVRAKDEADEKDAIATVN-KQEDANFSNNAMAEAFK 552 R I +S R + + + T K + + K Sbjct: 177 GRNIVVSRRKVLDLQKAENEGTFMLKHQPGALLEGKIVRLEK 218 >UniRef50_A8Z6B9 Putative ribosomal protein S1 n=1 Tax=Candidatus Sulcia muelleri GWSS RepID=A8Z6B9_SULMW Length = 614 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 134/360 (37%), Positives = 219/360 (60%), Gaps = 8/360 (2%) Query: 23 IVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGFGET 82 I G ++ I V++D G K+E I +F+ +V D ++V ++ ++ G Sbjct: 72 IYNGKIIKIIDRNVVIDFGFKAEGVISLNEFRY----ELPKVNDIIEVIVEKLD-YKGRC 126 Query: 83 LLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVR 142 ++S KAK+ ++W +++ + E + + + KGG V L GI FLPGS + ++PV+ Sbjct: 127 IISYNKAKKLKSWEIIQEKFIKNEIIIFFVAARTKGGLIVVLFGIECFLPGSQIYIKPVK 186 Query: 143 DTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNL 202 D GK +E K++K++ K+ NVVVS + +IE ++ +L+ L++G ++GIVKN+ Sbjct: 187 DFDFYVGKTMEGKIVKINNKKKNVVVSHKILIEKYIEKKKRKLISKLEKGQVLRGIVKNI 246 Query: 203 TDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQ 261 T YG+F+D+GG +DGL HITD++W+R++HPSE + +G I +L D+ + RV LGLKQ Sbjct: 247 THYGSFIDIGGGIDGLCHITDISWERIEHPSEKLEIGQTINFVILSIDKIKNRVQLGLKQ 306 Query: 262 LGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDW--TNKNIHPS 319 L +PW ++ + +G + G VT +TDYG FVEI GVEGLVHVSEM W T K Sbjct: 307 LQSNPWNSLEEEIKKGKVVIGTVTVVTDYGAFVEIFPGVEGLVHVSEMSWSKTKKLRSSQ 366 Query: 320 KVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGI 379 V +GD ++V++L+ D +++SL LK+ +PW+ + + G +KS T+FG+ Sbjct: 367 SFVKIGDKIKVLILNYDISDQKMSLSLKRLTPDPWENIEKKYKIGSIHIVTVKSFTNFGV 426 Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 91/406 (22%), Positives = 173/406 (42%), Gaps = 21/406 (5%) Query: 153 EFKVIKLDQKRNNVVVSRRAVIESENSAER-DQLLENLQEGMEVKGIVKNLTDYGAFVDL 211 K+ D + +S+ E + + + ++ E G + + D +D Sbjct: 30 NVKLSYFDWSSYELGLSKEEQEERKKIEKLYSDTISSIHEFYIYNGKIIKIIDRNVVIDF 89 Query: 212 G-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAI 270 G +G++ + + + E+ V D I V V K D + + K W I Sbjct: 90 GFKAEGVISLNEFRY-------ELPKVNDIIEVIVEKLDYKGRCIISYNKAKKLKSWEII 142 Query: 271 AKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEV 330 +++ + + V T G V + G+E + S++ + VG +E Sbjct: 143 QEKFIKNEIIIFFVAARTKGGLIVVLF-GIECFLPGSQI-YIKPVKDFD--FYVGKTMEG 198 Query: 331 MVLDIDEERRRISLG----LKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGG 386 ++ I+ +++ + + +++ ++ KG + G +K+IT +G FI + GG Sbjct: 199 KIVKINNKKKNVVVSHKILIEKYIEKKKRKLISKLEKGQVLRGIVKNITHYGSFIDIGGG 258 Query: 387 IDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVA 446 IDGL H++DISW E + + G I V+L +D + R+ LG+KQL +P+N+ Sbjct: 259 IDGLCHITDISWERI-EHPSEKLEIGQTINFVILSIDKIKNRVQLGLKQLQSNPWNSLEE 317 Query: 447 LNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDAT---LVLSVGDEVEA 503 KKG +V G VT V GA VE+ GVEG + SE S + + + +GD+++ Sbjct: 318 EIKKGKVVIGTVTVVTDYGAFVEIFPGVEGLVHVSEMSWSKTKKLRSSQSFVKIGDKIKV 377 Query: 504 KFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAE 549 D ++ +SLS++ ++ + + Sbjct: 378 LILNYDISDQKMSLSLKRLTPDPWENIEKKYKIGSIHIVTVKSFTN 423 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 96/366 (26%), Positives = 172/366 (46%), Gaps = 17/366 (4%) Query: 107 TVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNV 166 G I + ++ F ++ + R L +E V KLD K + Sbjct: 72 IYNGKIIKIIDRNVVIDF----GFKAEGVISLNEFRYELPKVNDIIEVIVEKLDYKGRCI 127 Query: 167 VVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWK 226 + +A +++ ++N + V T G V L G++ L + + K Sbjct: 128 ISYNKAKKLKSWEIIQEKFIKN----EIIIFFVAARTKGGLIVVLFGIECFLPGSQIYIK 183 Query: 227 RVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLK----QLGEDPWVAIAKRYPEGTKLTG 282 VK VG + K++K + ++ V + K + E + + +G L G Sbjct: 184 PVKDFD--FYVGKTMEGKIVKINNKKKNVVVSHKILIEKYIEKKKRKLISKLEKGQVLRG 241 Query: 283 RVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRI 342 V N+T YG F++I G++GL H++++ W + HPS+ + +G + ++L ID+ + R+ Sbjct: 242 IVKNITHYGSFIDIGGGIDGLCHITDISWE-RIEHPSEKLEIGQTINFVILSIDKIKNRV 300 Query: 343 SLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAG 402 LGLKQ ++NPW E KG V G + +TD+G F+ + G++GLVH+S++SW+ Sbjct: 301 QLGLKQLQSNPWNSLEEEIKKGKVVIGTVTVVTDYGAFVEIFPGVEGLVHVSEMSWSKTK 360 Query: 403 E--EAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTA 460 + + K GD+I ++L D +++SL +K+L DP+ N K G+I V + Sbjct: 361 KLRSSQSFVKIGDKIKVLILNYDISDQKMSLSLKRLTPDPWENIEKKYKIGSIHIVTVKS 420 Query: 461 VDAKGA 466 G Sbjct: 421 FTNFGV 426 Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 28/203 (13%), Positives = 74/203 (36%), Gaps = 14/203 (6%) Query: 16 IETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE---LEIQVGDEVDVAL 72 + G ++RG+V I +D G + + E ++++G ++ + Sbjct: 231 SKLEKGQVLRGIVKNITHYGSFIDIGGGIDGLCHITDISWERIEHPSEKLEIGQTINFVI 290 Query: 73 DAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFL 131 +++ L ++ + + W +LE+ + + V G + G VE+ G+ + Sbjct: 291 LSIDKIKNRVQLGLKQLQSNP-WNSLEEEIKKGKVVIGTVTVVTDYGAFVEIFPGVEGLV 349 Query: 132 PGSLVDVRPVRDTLH-----LEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLL 186 S + + G +++ ++ D + +S + + Sbjct: 350 HVSEMSWSKTKKLRSSQSFVKIGDKIKVLILNYDISDQKMSLSLKRLTPDPWENIE---- 405 Query: 187 ENLQEGMEVKGIVKNLTDYGAFV 209 + + G VK+ T++G + Sbjct: 406 KKYKIGSIHIVTVKSFTNFGVRL 428 Score = 51.5 bits (122), Expect = 8e-05, Method: Composition-based stats. Identities = 18/112 (16%), Positives = 40/112 (35%), Gaps = 7/112 (6%) Query: 15 EIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE------IQVGDEV 68 E E + G +V G V + V+ E + + ++ + +++GD++ Sbjct: 316 EEEIKKGKVVIGTVTVVTDYGAFVEIFPGVEGLVHVSEMSWSKTKKLRSSQSFVKIGDKI 375 Query: 69 DVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 V + + + LS ++ W +EK Y+ + G Sbjct: 376 KVLILNYDISDQKMSLSLKRLTPDP-WENIEKKYKIGSIHIVTVKSFTNFGV 426 Score = 44.2 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 5/81 (6%) Query: 221 TDMAW-KRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTK 279 D++W K + + I GD + + VL D +++LG KQL ++ W G+ Sbjct: 538 DDISWIKNLNNSINIYKKGDLVKLIVLGLDLITGKINLGSKQLIKNFWYENI----IGSI 593 Query: 280 LTGRVTNLTDYGCFVEIEEGV 300 TG++ G ++ ++ + Sbjct: 594 HTGKIIKFFYKGAIIKFKKKI 614 Score = 43.0 bits (100), Expect = 0.028, Method: Composition-based stats. Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 4/80 (5%) Query: 395 DISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIV 454 DISW ++ YKKGD + +VL +D +I+LG KQL ++ + G+I Sbjct: 539 DISWIKNLNNSINIYKKGDLVKLIVLGLDLITGKINLGSKQLIKNFWYEN----IIGSIH 594 Query: 455 TGKVTAVDAKGATVELADGV 474 TGK+ KGA ++ + Sbjct: 595 TGKIIKFFYKGAIIKFKKKI 614 >UniRef50_B0K198 RNA binding S1 domain protein n=7 Tax=Thermoanaerobacter RepID=B0K198_THEPX Length = 365 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 106/366 (28%), Positives = 199/366 (54%), Gaps = 13/366 (3%) Query: 9 FEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK---NAQGELEIQVG 65 F E RPG IV+G V+ + + ++ + KS++ +P + N + V Sbjct: 4 FLEGYTFKTLRPGDIVKGKVIKVSDEGIIANIDYKSDAFVPKNELSLNPNFDVKKTFNVE 63 Query: 66 DEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN 125 DE+++ + +VE+ G L S+ A + +EKAY++ E + G + VKGG Sbjct: 64 DELNLYIISVENDEGNVLASKVMADDKLSREKIEKAYKNEEIIEGEVIEVVKGGVIAYSL 123 Query: 126 GIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQL 185 G + F+P S +++ V GK L ++I+ + +V S++ V++ E + L Sbjct: 124 GAKVFIPASQLELHYVDKLNEYLGKTLRLRIIEYIPGK-KIVGSQKEVLKLEREKAKKAL 182 Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKV 245 L NL+EG V+G VKN+ D GAFVD+GG DG + +++++W+R+K+P E++ +GD++++ + Sbjct: 183 LSNLKEGDIVEGRVKNIIDKGAFVDIGGFDGFIPLSEISWERIKNPREVLGMGDKVSIYI 242 Query: 246 LKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVH 305 LK D + +++L L+++ DPW + +Y EG L G +T +T +G FV++E G+EGLVH Sbjct: 243 LKVDEKNEKITLSLRKVLPDPWKNVETKYHEGEVLKGTITKITPFGVFVQLEPGIEGLVH 302 Query: 306 VSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN---PWQQFAETHN 362 + + + K + D++ V +L+I+++ ++I+L + + Sbjct: 303 KNNL------ENSIKTYKINDIIGVEILNINQQDKKINLKEVPLEEEDIVEIEHQELRIT 356 Query: 363 KGDRVE 368 G+ Sbjct: 357 LGEIFN 362 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 66/347 (19%), Positives = 151/347 (43%), Gaps = 16/347 (4%) Query: 185 LLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITV 243 + L+ G VKG V ++D G ++ D + +++ + NV DE+ + Sbjct: 9 TFKTLRPGDIVKGKVIKVSDEGIIANIDYKSDAFVPKNELSLNPNFDVKKTFNVEDELNL 68 Query: 244 KVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGL 303 ++ + + V + ++ + ++ G + G + Sbjct: 69 YIISVENDEGNVLASKVMADDKLSREKIEKAYKNEEIIEGEVIEVVKGGVIAYSLGAKVF 128 Query: 304 VHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLG----LKQCKANPWQQFAE 359 + S++ + ++ + G + + +++ ++I LK + + Sbjct: 129 IPASQL-ELHYVDKLNEYL--GKTLRLRIIEYIP-GKKIVGSQKEVLKLEREKAKKALLS 184 Query: 360 THNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVV 419 +GD VEG++K+I D G F+ + GG DG + LS+ISW + GD+++ + Sbjct: 185 NLKEGDIVEGRVKNIIDKGAFVDI-GGFDGFIPLSEISWERI-KNPREVLGMGDKVSIYI 242 Query: 420 LQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLR 479 L+VD + E+I+L ++++ DP+ N +G ++ G +T + G V+L G+EG + Sbjct: 243 LKVDEKNEKITLSLRKVLPDPWKNVETKYHEGEVLKGTITKITPFGVFVQLEPGIEGLVH 302 Query: 480 ASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEAD 526 + E++ + D + + ++++++ I+L +E D Sbjct: 303 KNNL-----ENSIKTYKINDIIGVEILNINQQDKKINLKEVPLEEED 344 Score = 64.6 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 29/182 (15%), Positives = 65/182 (35%), Gaps = 4/182 (2%) Query: 356 QFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEI 415 +T GD V+GK+ ++D GI +D D V +++S N + + + DE+ Sbjct: 8 YTFKTLRPGDIVKGKVIKVSDEGIIANIDYKSDAFVPKNELSLN-PNFDVKKTFNVEDEL 66 Query: 416 AAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVE 475 ++ V+ + + + + K + KG + + G + Sbjct: 67 NLYIISVENDEGNVLASKVMADDKLSREKIEKAYKNEEIIEGEVIEVVKGGVIAYSLGAK 126 Query: 476 GYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVN 535 ++ AS+ V+ L G + + + I S + + + + A + Sbjct: 127 VFIPASQLELHYVDKLNEYL--GKTLRLRIIEYIP-GKKIVGSQKEVLKLEREKAKKALL 183 Query: 536 KQ 537 Sbjct: 184 SN 185 >UniRef50_B4UDY4 RNA binding S1 domain protein n=4 Tax=Anaeromyxobacter RepID=B4UDY4_ANASK Length = 537 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 109/364 (29%), Positives = 171/364 (46%), Gaps = 27/364 (7%) Query: 4 SFAQLF--EESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKS-ESAIPAEQFKNAQGEL 60 SFA + E+ + G V G ++ I +DV ++ G E+ I + K+ G + Sbjct: 137 SFADMLAGSEAGPRRRFQVGEKVAGKIIQIGEDVAFLELGSGVAEAMIETVELKDEAGNV 196 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 +VGD +D + D +A R A + +A V GV+ KGG Sbjct: 197 AARVGDIIDAVVVKATDRGAVVSKGHGRATRDNARDAVIEAAHTGLPVEGVVKAVNKGGL 256 Query: 121 TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 VE++G+RAF P S +DVR V D G++L FKV + D + V+SRRA++E E + Sbjct: 257 EVEVHGVRAFCPISQIDVRFVGDASSFVGQKLLFKVTRADARD--AVLSRRALLEEERAH 314 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 + + L G G+V ++ DYGAFVD+GGV+GL+H++++AW RV P ++++ GD Sbjct: 315 KAAETRARLAPGAVFDGVVTSVQDYGAFVDIGGVEGLVHVSELAWDRVSKPQDLLSAGDA 374 Query: 241 ITVKVLKFDRERT---RVSLGLK----------------QLGEDPWVAIAKRYPEGTKLT 281 + V+VL+ D + R+ L +K G + Sbjct: 375 VQVQVLRIDEDPKKGERIGLSVKALAPRPEPAAPAPGAEGAERPARPTPPPPPRVGDVVQ 434 Query: 282 GRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRR 341 V + +G FV G GLV SE T + + VGD ++ +V ID E+ R Sbjct: 435 ATVDKVESFGVFVRFAGG-RGLVPASE-TGTPRGADLRRSFKVGDTLQALVSAID-EQGR 491 Query: 342 ISLG 345 I L Sbjct: 492 IRLS 495 Score = 188 bits (477), Expect = 6e-46, Method: Composition-based stats. Identities = 87/399 (21%), Positives = 148/399 (37%), Gaps = 41/399 (10%) Query: 187 ENLQEGMEVKGIVKNLTDYGAFVDLGG--VDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 Q G +V G + + + AF++LG + ++ ++ + + VGD I Sbjct: 151 RRFQVGEKVAGKIIQIGEDVAFLELGSGVAEAMIETVELKDEAGNVAA---RVGDIIDAV 207 Query: 245 VLKFDRERTRVSLGL-KQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGL 303 V+K VS G + ++ A+ + G + G V + G VE+ GV Sbjct: 208 VVKATDRGAVVSKGHGRATRDNARDAVIEAAHTGLPVEGVVKAVNKGGLEVEV-HGVRAF 266 Query: 304 VHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQF----AE 359 +S++ S V G + V D R L + Sbjct: 267 CPISQI-DVRFVGDASSFV--GQKLLFKVTRADA--RDAVLSRRALLEEERAHKAAETRA 321 Query: 360 THNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVV 419 G +G + S+ D+G F+ + GG++GLVH+S+++W+ + GD + V Sbjct: 322 RLAPGAVFDGVVTSVQDYGAFVDI-GGVEGLVHVSELAWDRVSK-PQDLLSAGDAVQVQV 379 Query: 420 LQVD---AERERISLGVKQLAEDPFNNWVALNK----------------KGAIVTGKVTA 460 L++D + ERI L VK LA P A G +V V Sbjct: 380 LRIDEDPKKGERIGLSVKALAPRPEPAAPAPGAEGAERPARPTPPPPPRVGDVVQATVDK 439 Query: 461 VDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 V++ G V A G G + ASE R D VGD ++A + +D + I LS Sbjct: 440 VESFGVFVRFAGG-RGLVPASETGTPRGADLRRSFKVGDTLQALVSAID-EQGRIRLSKT 497 Query: 521 AKDEADEKDAIATVNKQEDANFSN--NAMAEAFKAAKGE 557 + A E+ + + + + + Sbjct: 498 EAEHAAERAEAREYMAKAPRGQGKGFGTLGDLLRQKLEK 536 Score = 137 bits (346), Expect = 8e-31, Method: Composition-based stats. Identities = 63/274 (22%), Positives = 112/274 (40%), Gaps = 24/274 (8%) Query: 258 GLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV-EGLVHVSEMDWTNKNI 316 + +R+ G K+ G++ + + F+E+ GV E ++ E+ N+ Sbjct: 137 SFADMLAGSEAGPRRRFQVGEKVAGKIIQIGEDVAFLELGSGVAEAMIETVELKDEAGNV 196 Query: 317 HPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNK---GDRVEGKIKS 373 VGD+++ +V + R + +A G VEG +K+ Sbjct: 197 AAR----VGDIIDAVV--VKATDRGAVVSKGHGRATRDNARDAVIEAAHTGLPVEGVVKA 250 Query: 374 ITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGV 433 + G+ + + G+ +S I G+ + G ++ V + DA L Sbjct: 251 VNKGGLEVEV-HGVRAFCPISQIDVRFVGDASSF---VGQKLLFKVTRADARD--AVLSR 304 Query: 434 KQLAEDPFNNW----VALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVE 489 + L E+ + A GA+ G VT+V GA V++ GVEG + SE + DRV Sbjct: 305 RALLEEERAHKAAETRARLAPGAVFDGVVTSVQDYGAFVDIG-GVEGLVHVSELAWDRVS 363 Query: 490 DATLVLSVGDEVEAKFTGVDRKNR---AISLSVR 520 +LS GD V+ + +D + I LSV+ Sbjct: 364 KPQDLLSAGDAVQVQVLRIDEDPKKGERIGLSVK 397 >UniRef50_UPI0000E22681 PREDICTED: programmed cell death 11 n=1 Tax=Pan troglodytes RepID=UPI0000E22681 Length = 1491 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 110/626 (17%), Positives = 202/626 (32%), Gaps = 122/626 (19%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDV 70 +S PG +V+ V + + ++ + + + V Sbjct: 271 QSWNLNNLLPGLVVKARVQKVTPFGLTLNFLTFFTGVVDFMHL-DPKKAGTYFSNQAVRA 329 Query: 71 ALDAVEDGFGETLLSREKAKRHEAWITLEKAYED------AETVTGVINGKVKGGFTVEL 124 + V LS + ++ V G K G T L Sbjct: 330 CILCVHPRTRVVRLSLRPIFLQPGRPLTRLSCQNLGAVLDDVPVQGFFK---KAGATFRL 386 Query: 125 -NGIRAFLPGSLV-DVRPVRDTLHLE-GKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 +G+ A+ S + D + V + + G + ++I Q ++S R I Sbjct: 387 KDGVLAYARLSHLSDSKNVFNPEAFKPGNTHKCRIIDYSQMDELALLSLRTSIIEAQYL- 445 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSEIVNVGDE 240 +++ G VKG V + YG V +G GL+ +A +K+P + ++GDE Sbjct: 446 ---RYHDIEPGAVVKGTVLTIKSYGMLVKVGEQMRGLVPPMHLADILMKNPEKKYHIGDE 502 Query: 241 ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRY---PEGTKLTGRVTNLTDYGCFVEIE 297 + +VL D E ++ + LK+ + + + Y G + G + + DYGC V+ Sbjct: 503 VKCRVLLCDPEAKKLMMTLKKTLIESKLPVINCYADAKPGLQTHGFIIRVKDYGCIVKFY 562 Query: 298 EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVE-------VMV------------------ 332 V+GLV E+ P +V G + +V Sbjct: 563 NNVQGLVPKHELSTEY-IPDPERVFYTGQRLSRSLKASAAVVEGTLQGLQGLLGGVGQAC 621 Query: 333 -----------LDIDEERRRISLGLKQCKANPWQQFA--------ETHNKGDRVEGKIKS 373 L+ + + R+ L K ++ + N G V+ K+ Sbjct: 622 VVSCQVVKVVVLNCEPSKERMLLSFKLSSDPEPKKEPAGHSQKKGKAINTGQLVDVKVLE 681 Query: 374 ITDFGIFIG-LDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERER-ISL 431 T G+ + L I + S +S +VA + + + +I VL + R +SL Sbjct: 682 KTKDGLEVAVLPHNIRAFLPTSHLSDHVANGPLLHHWLQAGDILHRVLCLSQSEGRVVSL 741 Query: 432 GVKQLAED---PFNNWVALN---------------------------------------- 448 AE+ P+ + Sbjct: 742 TGICGAEEGGGPWVLGWEILGKLDSYLTSEISPQNQTSDEACAMESKSRPEKPALVSTVE 801 Query: 449 -----------KKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSV 497 G ++ G V ++ G ++ G+ G + S V + Sbjct: 802 GGQDPKNFSEIHPGMLLIGFVKSIKDYGVFIQFPSGLSGLAPKAIMSDKFVTSTSDHFVE 861 Query: 498 GDEVEAKFTGVDRKNRAISLSVRAKD 523 G V AK T VD + + + LS+R D Sbjct: 862 GQTVAAKVTNVDEEKQRMLLSLRLSD 887 Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats. Identities = 96/618 (15%), Positives = 202/618 (32%), Gaps = 79/618 (12%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE----------- 59 E L G + G V +++ +++ + + + +A + Sbjct: 73 EILSVESLCEGMRILGCVKEVNELELVISLPNGLQGFVQVTEICDAYTKKLNEQVTQEQP 132 Query: 60 --------LEIQVGDEVDVALDAVE-DGFGETLLSREKAKRHEAWITLEKAYEDAETVTG 110 G V + ++ G+ + ++ + +A + +TG Sbjct: 133 LKDLLHLPELFSPGMLVRCVVSSLGITDRGKKSVKLSLNPKNVNRVLSAEALKPGMLLTG 192 Query: 111 VINGKVKGGFTVELN--GIRAFLP---GSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNN 165 ++ G+ V++ G RAFLP + + G+ L V K+ Sbjct: 193 TVSSLEDHGYLVDIGVDGTRAFLPLLKAQEYIRQKNKGAKLKVGQYLNCIVEKVKGNGGV 252 Query: 166 VVVS--RRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVD-LGGVDGLLHITD 222 V +S V + + ++ L NL G+ VK V+ +T +G ++ L G++ Sbjct: 253 VSLSVGHSEVSTAIATEQQSWNLNNLLPGLVVKARVQKVTPFGLTLNFLTFFTGVVDFMH 312 Query: 223 MAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAK--RYPEGTKL 280 + K + + +L V L L+ + P + + G L Sbjct: 313 LD---PKKAGTYFS-NQAVRACILCVHPRTRVVRLSLRPIFLQPGRPLTRLSCQNLGAVL 368 Query: 281 TGRVTN--LTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEE 338 G +++GV +S + + +P + G+ + ++D + Sbjct: 369 DDVPVQGFFKKAGATFRLKDGVLAYARLSHLSDSKNVFNP-EAFKPGNTHKCRIIDYSQM 427 Query: 339 RRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISW 398 L L+ G V+G + +I +G+ + + + GLV ++ Sbjct: 428 DELALLSLRTSIIEAQYLRYHDIEPGAVVKGTVLTIKSYGMLVKVGEQMRGLVPPMHLAD 487 Query: 399 NVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVK---QLAEDPFNNWVALNKKGAIVT 455 + + ++Y GDE+ VL D E +++ + +K ++ P N A K G Sbjct: 488 -ILMKNPEKKYHIGDEVKCRVLLCDPEAKKLMMTLKKTLIESKLPVINCYADAKPGLQTH 546 Query: 456 GKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVE-------AKF--- 505 G + V G V+ + V+G + E S + + D V G + A Sbjct: 547 GFIIRVKDYGCIVKFYNNVQGLVPKHELSTEYIPDPERVFYTGQRLSRSLKASAAVVEGT 606 Query: 506 --------------------------TGVDRKNRAISLSVRAKDEADEKDAIA--TVNKQ 537 + + LS + + + K A + K Sbjct: 607 LQGLQGLLGGVGQACVVSCQVVKVVVLNCEPSKERMLLSFKLSSDPEPKKEPAGHSQKKG 666 Query: 538 EDANFSNNAMAEAFKAAK 555 + N + + K Sbjct: 667 KAINTGQLVDVKVLEKTK 684 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 91/578 (15%), Positives = 178/578 (30%), Gaps = 107/578 (18%) Query: 20 PGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGF 79 PG + VV + +D +V +G + + + E++ G + V + V+ Sbjct: 931 PGMFLDLVVREVLEDGSVVFSGGPVPDLVLKAS-RYHRAGQEVESGQKKKVVILNVDL-- 987 Query: 80 GETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT---VELNGIRAFLPGSLV 136 L + + + V+ K VE + AF S + Sbjct: 988 --LKLEVHVSLHQDLVNRKARKLRKGSEHQAVVQHLEKSFAIASLVETGHLAAFSLTSHL 1045 Query: 137 DVRP---VRDTLHLEGKELEFKVIK-------LDQKRNNVVVSRRAVIESENSAERDQLL 186 + +G L K + L + + R + + + D+ + Sbjct: 1046 NDTFRFDSEKLQVGQGVSLTLKTTEPGVTGLLLAVEGPAAKRTMRPTRKDSETVDEDEEV 1105 Query: 187 E-----------NLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVK--HPS 232 + L G V G VK++ V L G+ G +H + + + P+ Sbjct: 1106 DPALTVGTIKKHTLSIGDMVTGTVKSIKPTHVVVTLEDGIIGCIHASHILDDVPEGTSPT 1165 Query: 233 EIVNVGDEITVKVLK-FDRERTRVS----------------------------------- 256 + VG +T +V+ D + + Sbjct: 1166 TKLKVGKTVTARVIGGRDMKTFKYGGSGGGLASREIVVVVGGLGKYLPISHPRFVRTIPE 1225 Query: 257 LGLKQLGEDPWVAI-----------AKRYPEGTKLTGRVT--NLTDYGCFVEIEEGVEGL 303 L ++ + K+Y G +T + N+ VEI + G Sbjct: 1226 LSVRPSELEDGHTALNTHSVSPVEKIKQYQAGQTVTCFLKKYNVVKKWLEVEIAPDIRGR 1285 Query: 304 VHVSEMDWTNKN-IHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHN 362 + + + K HP K VG + V+ D + + L L Sbjct: 1286 IPLLLTSLSFKVLKHPDKKFRVGQALRATVVGPDSSKTFLCLSLTG---------PHKLE 1336 Query: 363 KGDRVEGKIKSITDF-GIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQ 421 +G+ G++ +T G+ + G G V + +S + E + ++ + +L Sbjct: 1337 EGEVAMGRVVKVTPNEGLTVSFPFGKIGTVSIFHMSDSY-SETPLEDFVPQKVVRCYILS 1395 Query: 422 VDAERERISLGV---------KQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELAD 472 ++L + K EDP N + K+G ++ G V ++ G L Sbjct: 1396 --TADNVLTLSLRSSRTNPETKSKVEDPEINSIQDIKEGQLLRGYVGSIQPHGVFFRLGP 1453 Query: 473 GVEGYL---RASEASRDRVEDATLVLSVGDEVEAKFTG 507 V G S+ S + L G + A+ Sbjct: 1454 SVVGLARYSHVSQHSPSKKTLYNKHLPEGKLLTARVLR 1491 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 90/652 (13%), Positives = 186/652 (28%), Gaps = 144/652 (22%) Query: 14 KEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQG---ELEIQVGDEVDV 70 E PG ++ G V +I V + P + G V Sbjct: 808 NFSEIHPGMLLIGFVKSIKDYGVFIQFPSGLSGLAPKAIMSDKFVTSTSDHFVEGQTVAA 867 Query: 71 ALDAVEDGFGETLLSRE------------------------------KAKRHEAWITLEK 100 + V++ LLS + R I Sbjct: 868 KVTNVDEEKQRMLLSLRLSDCGLGDLAITSLLLLNQCLEELQGVRSLMSNRDSVLIQTLA 927 Query: 101 AYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLV---DVRPVRDTLHLE-GKELEFKV 156 + V+ ++ G V G P + R R +E G++ + + Sbjct: 928 EMTPGMFLDLVVREVLEDGSVVFSGG-----PVPDLVLKASRYHRAGQEVESGQKKKVVI 982 Query: 157 IKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAF---VDLGG 213 + +D + V VS + + + L++G E + +V++L A V+ G Sbjct: 983 LNVDLLKLEVHVSLHQDLVNRKA-------RKLRKGSEHQAVVQHLEKSFAIASLVETGH 1035 Query: 214 VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDR-------------ERTRVSLGLK 260 + + + SE + VG +++ + + + + K Sbjct: 1036 LAAFSLTSHLNDTFRFD-SEKLQVGQGVSLTLKTTEPGVTGLLLAVEGPAAKRTMRPTRK 1094 Query: 261 QLGEDP-----------WVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSE- 308 G +TG V ++ V +E+G+ G +H S Sbjct: 1095 DSETVDEDEEVDPALTVGTIKKHTLSIGDMVTGTVKSIKPTHVVVTLEDGIIGCIHASHI 1154 Query: 309 MDWTNKNIHPSKVVNVGDVVEVMVLD-IDEERRRIS------------------------ 343 +D + P+ + VG V V+ D + + Sbjct: 1155 LDDVPEGTSPTTKLKVGKTVTARVIGGRDMKTFKYGGSGGGLASREIVVVVGGLGKYLPI 1214 Query: 344 -----------LGLKQCKAN-----------PWQQFAETHNKGDRVEGKIK--SITDFGI 379 L ++ + + + + G V +K ++ + Sbjct: 1215 SHPRFVRTIPELSVRPSELEDGHTALNTHSVSPVEKIKQYQAGQTVTCFLKKYNVVKKWL 1274 Query: 380 FIGLDGGIDGLVHLSDISWNV-AGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAE 438 + + I G + L S + + ++++ G + A V+ D+ + + L + Sbjct: 1275 EVEIAPDIRGRIPLLLTSLSFKVLKHPDKKFRVGQALRATVVGPDSSKTFLCLSL----- 1329 Query: 439 DPFNNWVALNKKGAIVTGKVTAVDAK-GATVELADGVEGYLRASEASRDRVEDATLVLSV 497 ++G + G+V V G TV G G + S E Sbjct: 1330 ----TGPHKLEEGEVAMGRVVKVTPNEGLTVSFPFGKIGTVSIFHMSDSYSETPLEDFVP 1385 Query: 498 GDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAE 549 V + ++LS+R+ E + ++ S + E Sbjct: 1386 QKVVRCYILS--TADNVLTLSLRSSRTNPETKS----KVEDPEINSIQDIKE 1431 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 82/409 (20%), Positives = 145/409 (35%), Gaps = 37/409 (9%) Query: 143 DTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNL 202 D EG K K K + + +R +S +E+L EGM + G VK + Sbjct: 34 DISTEEGSTKRKKSQKGPAKTKKLKIEKRESSKSAREKFEILSVESLCEGMRILGCVKEV 93 Query: 203 TDYGAFVDLG-GVDGLLHITDMAWKRVKHPS----------------EIVNVGDEITVKV 245 + + L G+ G + +T++ K + E+ + G + V Sbjct: 94 NELELVISLPNGLQGFVQVTEICDAYTKKLNEQVTQEQPLKDLLHLPELFSPGMLVRCVV 153 Query: 246 LKF---DRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE-EGVE 301 DR + V L L V A+ G LTG V++L D+G V+I +G Sbjct: 154 SSLGITDRGKKSVKLSL-NPKNVNRVLSAEALKPGMLLTGTVSSLEDHGYLVDIGVDGTR 212 Query: 302 GLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKA------NPWQ 355 + + + + + + VG + +V + +SL + + Sbjct: 213 AFLPLLKAQEYIRQKNKGAKLKVGQYLNCIVEKVKGNGGVVSLSVGHSEVSTAIATEQQS 272 Query: 356 QFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEI 415 G V+ +++ +T FG+ + G+V + AG Y + Sbjct: 273 WNLNNLLPGLVVKARVQKVTPFGLTLNFLTFFTGVVDFMHLDPKKAG-----TYFSNQAV 327 Query: 416 AAVVLQVDAERERISLGVKQLAEDPFNNWVALN--KKGAIV-TGKVTAVDAK-GATVELA 471 A +L V + L ++ + P L+ GA++ V K GAT L Sbjct: 328 RACILCVHPRTRVVRLSLRPIFLQPGRPLTRLSCQNLGAVLDDVPVQGFFKKAGATFRLK 387 Query: 472 DGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 DGV Y R S S + G+ + + + + LS+R Sbjct: 388 DGVLAYARLSHLSDSKNVFNPEAFKPGNTHKCRIIDYSQMDELALLSLR 436 Score = 131 bits (330), Expect = 7e-29, Method: Composition-based stats. Identities = 89/563 (15%), Positives = 165/563 (29%), Gaps = 112/563 (19%) Query: 12 SLKEIETRPGSIVRGVVVAIDKDVVLVD-AGLKSESAIPAEQFKNAQGELEI-----QVG 65 K G +V V+ KD + V + +P + + Q G Sbjct: 663 QKKGKAINTGQLVDVKVLEKTKDGLEVAVLPHNIRAFLPTSHLSDHVANGPLLHHWLQAG 722 Query: 66 DEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN 125 D + + + G + E +E + + ++ Sbjct: 723 DILH-RVLCLSQSEGRVVSLTGICGAEEGGGPWVLGWEILGKLDSYLTSEIS-------- 773 Query: 126 GIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQL 185 P + + + + A++ + + + Sbjct: 774 ------PQNQTSD-------------------EACAMESKSRPEKPALVSTVEGGQDPKN 808 Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 + GM + G VK++ DYG F+ G+ GL M+ K V S+ G + K Sbjct: 809 FSEIHPGMLLIGFVKSIKDYGVFIQFPSGLSGLAPKAIMSDKFVTSTSDHFVEGQTVAAK 868 Query: 245 VLKFDRERTRVSLGLKQ-------------------LGEDPW------------VAIAKR 273 V D E+ R+ L L+ L E + Sbjct: 869 VTNVDEEKQRMLLSLRLSDCGLGDLAITSLLLLNQCLEELQGVRSLMSNRDSVLIQTLAE 928 Query: 274 YPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWT-NKNIHPSKVVNVGDVVEVMV 332 G L V + + G V G V ++ ++ + V G +V++ Sbjct: 929 MTPGMFLDLVVREVLEDGSVV-FSGG-----PVPDLVLKASRYHRAGQEVESGQKKKVVI 982 Query: 333 LDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGL--DGGIDGL 390 L++D + + + L Q N KG + ++ + L G + Sbjct: 983 LNVDLLKLEVHVSLHQDLVNRKA---RKLRKGSEHQAVVQHLEKSFAIASLVETGHLAAF 1039 Query: 391 VHLSDISWNVAGEEAVREYKKGD-----------EIAAVVLQVD--AERERISLGVKQLA 437 S ++ + + + G + ++L V+ A + + K Sbjct: 1040 SLTSHLNDTFRFD--SEKLQVGQGVSLTLKTTEPGVTGLLLAVEGPAAKRTMRPTRKDSE 1097 Query: 438 EDPFNNWVAL-----------NKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRD 486 + V G +VTG V ++ V L DG+ G + AS D Sbjct: 1098 TVDEDEEVDPALTVGTIKKHTLSIGDMVTGTVKSIKPTHVVVTLEDGIIGCIHASHILDD 1157 Query: 487 RVE--DATLVLSVGDEVEAKFTG 507 E T L VG V A+ G Sbjct: 1158 VPEGTSPTTKLKVGKTVTARVIG 1180 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 73/398 (18%), Positives = 118/398 (29%), Gaps = 94/398 (23%) Query: 12 SLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE-----LEIQVGD 66 ++K+ G +V G V +I V+V I A + E +++VG Sbjct: 1113 TIKKHTLSIGDMVTGTVKSIKPTHVVVTLEDGIIGCIHASHILDDVPEGTSPTTKLKVGK 1172 Query: 67 EVDVALDAVED------------------------------------------------- 77 V + D Sbjct: 1173 TVTARVIGGRDMKTFKYGGSGGGLASREIVVVVGGLGKYLPISHPRFVRTIPELSVRPSE 1232 Query: 78 -GFGETLLSREKAKRHEAWITLEKAYEDAETVTGVIN--GKVKGGFTVELN-GIRAFLPG 133 G T L+ E Y+ +TVT + VK VE+ IR +P Sbjct: 1233 LEDGHTALNTHSVSPVEKIKQ----YQAGQTVTCFLKKYNVVKKWLEVEIAPDIRGRIPL 1288 Query: 134 SLVDVRPV----RDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENL 189 L + D G+ L V+ D + + +S L Sbjct: 1289 LLTSLSFKVLKHPDKKFRVGQALRATVVGPDSSKTFLCLSL-------------TGPHKL 1335 Query: 190 QEGMEVKGIVKNLTDY-GAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLK 247 +EG G V +T G V G G + I M+ + P E + +L Sbjct: 1336 EEGEVAMGRVVKVTPNEGLTVSFPFGKIGTVSIFHMSDSYSETPLEDFVPQKVVRCYILS 1395 Query: 248 FDRERTRVSLGL---------KQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE 298 ++L L K EDP + + EG L G V ++ +G F + Sbjct: 1396 --TADNVLTLSLRSSRTNPETKSKVEDPEINSIQDIKEGQLLRGYVGSIQPHGVFFRLGP 1453 Query: 299 GVEGLVHVSEMDWTNKNIHP--SKVVNVGDVVEVMVLD 334 V GL S + + + +K + G ++ VL Sbjct: 1454 SVVGLARYSHVSQHSPSKKTLYNKHLPEGKLLTARVLR 1491 >UniRef50_B8PP03 Predicted protein (Fragment) n=1 Tax=Postia placenta Mad-698-R RepID=B8PP03_POSPM Length = 1088 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 111/606 (18%), Positives = 212/606 (34%), Gaps = 96/606 (15%) Query: 9 FEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEV 68 E PG++V+ +V A+ D + + I + E +VG ++ Sbjct: 174 LSEVASVTSILPGTLVQSLVTAVVPDGLNLQVLGYFVGTIDQFHLRAGDVEENYKVGQKI 233 Query: 69 DVALD-----------AVEDGFGETLLSREKAKRHEAWIT--LEKAYEDAETVTGV--IN 113 + A+ LS + A + L+ AY + V + Sbjct: 234 KARILYDVSPSTPPRFALSVVEHVLKLSPKHAAGSDGSKDSSLQDAYPVGAILEAVKVVR 293 Query: 114 GKVKGGFTVELN-GIRAFLPGSLVDVRPVRDTLH-----LEGKELEFKVIKLDQKRNNVV 167 + + G VE++ G+ F+ S V V G + +V + Sbjct: 294 VEAERGLVVEISSGLEGFVHISQVSDEHVPSLSPSSGHWKVGTVHKARVTGHFHLDGCLQ 353 Query: 168 VSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWK 226 +S R + + + + +Q G +KG VK LT+ FV + G VDG++ A Sbjct: 354 LSFRPSVLEQKFLQ----VGEVQVGELIKGTVKRLTESALFVSMSGSVDGVVWPNHYADI 409 Query: 227 RVKHPSEIVNVG--------------DEITVK---------------------------- 244 +KHP G V+ Sbjct: 410 ALKHPQRRFRPGVVAELQKDKAVITLQPTQVRALLSLNNLANRRGVSLTQLRTSLKTDEK 469 Query: 245 -----VLKFDRERTRVSLGLKQLGEDP----WVAIAKRYPEGTKLTGRVTNLTDYGCFVE 295 V+ + E+ V + K ++ G + GRV G V+ Sbjct: 470 LQDLVVVSRNPEKGFVLVATKPKEKESLLQKGSLNLDTIQVGQVVGGRVLRHGRQGALVK 529 Query: 296 IEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQ 355 + + G +H ++ + V +++ +VL ID ++R+++L + + P Q Sbjct: 530 LTSSISGTLHPTDTCDDFDSGRA--FPPVDSILKAVVLSIDRDKRQLTLSTRPSRLYPDQ 587 Query: 356 QFA---------ETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAV 406 G V G IK++ + GIF+ L ID V + ++ ++ Sbjct: 588 AKDVKDHEVDGVSDLKVGQTVRGFIKNVAEHGIFVMLGRHIDARVQIKELFDEYV-KDWK 646 Query: 407 REYKKGDEIAAVVLQVDAERERISLGVKQ---LAEDPFNNWVALNKKGAIVTGKVTAVDA 463 + + VL VD +++++ + + + + +A +G V G+V ++ Sbjct: 647 SHFAANQLVKGRVLSVDFDKKQVEMTFRSGDLKRDARSQSTLADLSEGQKVDGRVKKIED 706 Query: 464 KGATVELAD-GVEGYLRASEASRDRVEDAT---LVLSVGDEVEAKFTGVDRKNRAISLSV 519 G +E+A + G SE S ++ D T D+V+A +DR+ R IS + Sbjct: 707 YGLFIEIAGSKLSGLCHKSELSDNKDADVTLALRSFRENDQVKAVILSIDREKRRISFGL 766 Query: 520 RAKDEA 525 + A Sbjct: 767 KPSYFA 772 Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats. Identities = 91/627 (14%), Positives = 210/627 (33%), Gaps = 90/627 (14%) Query: 9 FEESLKEIETRPGSIVRGVVVAIDKDVVLVDAG-LKSESAIPAEQFKNAQ--GELEIQVG 65 S+ + + R G + V +I+ ++D G + ++ K + ++ VG Sbjct: 84 VNASVSKSDLRAGFTLSAAVKSIEDHGYILDLGIPDVSGFLSFKEAKKGPFGDDNKLPVG 143 Query: 66 DEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAET---VTGVINGKVKGGFTV 122 +DV + + +S + A +A ++ + V ++ V G + Sbjct: 144 RLIDVCVVKITGNGRTCTVSVDSASVRDASLSEVASVTSILPGTLVQSLVTAVVPDGLNL 203 Query: 123 ELNG-IRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA- 180 ++ G + + V + + G++++ +++ D + +V+E Sbjct: 204 QVLGYFVGTIDQFHLRAGDVEE-NYKVGQKIKARIL-YDVSPSTPPRFALSVVEHVLKLS 261 Query: 181 ----------ERDQLLENLQEGMEVKG-IVKNLT-DYGAFVDLG-GVDGLLHITDMAWKR 227 + L + G ++ V + + G V++ G++G +HI+ ++ + Sbjct: 262 PKHAAGSDGSKDSSLQDAYPVGAILEAVKVVRVEAERGLVVEISSGLEGFVHISQVSDEH 321 Query: 228 VKHPS---EIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRV 284 V S VG +V + L + + G + G V Sbjct: 322 VPSLSPSSGHWKVGTVHKARVTGHFHLDGCLQLSFRPSVLEQKFLQVGEVQVGELIKGTV 381 Query: 285 TNLTDYGCFVEIEEGVEGLV---HVSEMDWTNKNIHPS-KVVNVGDVVEVMV-------- 332 LT+ FV + V+G+V H +++ + VV + ++ Sbjct: 382 KRLTESALFVSMSGSVDGVVWPNHYADIALKHPQRRFRPGVVAELQKDKAVITLQPTQVR 441 Query: 333 --LDIDEERRRISLGLKQCKA------------------------------------NPW 354 L ++ R + L Q + Sbjct: 442 ALLSLNNLANRRGVSLTQLRTSLKTDEKLQDLVVVSRNPEKGFVLVATKPKEKESLLQKG 501 Query: 355 QQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDE 414 +T G V G++ G + L I G +H +D + + Sbjct: 502 SLNLDTIQVGQVVGGRVLRHGRQGALVKLTSSISGTLHPTDTCDDF--DSGRAFPPVDSI 559 Query: 415 IAAVVLQVDAERERISLGVKQLAEDPFNNWV---------ALNKKGAIVTGKVTAVDAKG 465 + AVVL +D ++ +++L + P + K G V G + V G Sbjct: 560 LKAVVLSIDRDKRQLTLSTRPSRLYPDQAKDVKDHEVDGVSDLKVGQTVRGFIKNVAEHG 619 Query: 466 ATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKD-- 523 V L ++ ++ E + V+D + V+ + VD + + ++ R+ D Sbjct: 620 IFVMLGRHIDARVQIKELFDEYVKDWKSHFAANQLVKGRVLSVDFDKKQVEMTFRSGDLK 679 Query: 524 -EADEKDAIATVNKQEDANFSNNAMAE 549 +A + +A +++ + + + + Sbjct: 680 RDARSQSTLADLSEGQKVDGRVKKIED 706 Score = 165 bits (417), Expect = 6e-39, Method: Composition-based stats. Identities = 89/535 (16%), Positives = 173/535 (32%), Gaps = 82/535 (15%) Query: 74 AVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN--GIRAFL 131 V+ LS K + + + T++ + G+ ++L + FL Sbjct: 67 EVQKASRRIELSLIPEKVNASVSKSD--LRAGFTLSAAVKSIEDHGYILDLGIPDVSGFL 124 Query: 132 PGSLVDVRPV-RDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQ 190 P D G+ ++ V+K+ VS + + S + ++ Sbjct: 125 SFKEAKKGPFGDDNKLPVGRLIDVCVVKITGNGRTCTVSVDSASVRDASLSEVASVTSIL 184 Query: 191 EGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVL-KF 248 G V+ +V + G + + G G + + R E VG +I ++L Sbjct: 185 PGTLVQSLVTAVVPDGLNLQVLGYFVGTIDQFHL---RAGDVEENYKVGQKIKARILYDV 241 Query: 249 DRER----------TRVSLGLKQLGEDPWVA---IAKRYPEGTKLTG-RVTNLT-DYGCF 293 + L K + YP G L +V + + G Sbjct: 242 SPSTPPRFALSVVEHVLKLSPKHAAGSDGSKDSSLQDAYPVGAILEAVKVVRVEAERGLV 301 Query: 294 VEIEEGVEGLVHVSEMDWTN-KNIHPSK-VVNVGDVVEVMVLDIDEERRRISLGLKQCKA 351 VEI G+EG VH+S++ + ++ PS VG V + V + L + Sbjct: 302 VEISSGLEGFVHISQVSDEHVPSLSPSSGHWKVGTVHKARVTGHFHLDGCLQLSFRPSVL 361 Query: 352 NPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKK 411 G+ ++G +K +T+ +F+ + G +DG+V + + +A + R ++ Sbjct: 362 EQKFLQVGEVQVGELIKGTVKRLTESALFVSMSGSVDGVVWPNHYAD-IALKHPQRRFRP 420 Query: 412 G--------------DEIAAV---------------------------------VLQVDA 424 G V+ + Sbjct: 421 GVVAELQKDKAVITLQPTQVRALLSLNNLANRRGVSLTQLRTSLKTDEKLQDLVVVSRNP 480 Query: 425 ERERISLGVKQLAEDPFNN----WVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRA 480 E+ + + K ++ + + G +V G+V +GA V+L + G L Sbjct: 481 EKGFVLVATKPKEKESLLQKGSLNLDTIQVGQVVGGRVLRHGRQGALVKLTSSISGTLHP 540 Query: 481 SEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRA--KDEADEKDAIAT 533 ++ D V ++A +DR R ++LS R KD Sbjct: 541 TDTCDDFDSG-RAFPPVDSILKAVVLSIDRDKRQLTLSTRPSRLYPDQAKDVKDH 594 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 73/408 (17%), Positives = 142/408 (34%), Gaps = 67/408 (16%) Query: 8 LFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAI---PAEQFKNAQGELEIQV 64 L ++ L+ E + G +++G V + + + V + + + + Sbjct: 361 LEQKFLQVGEVQVGELIKGTVKRLTESALFVSMSGSVDGVVWPNHYADIALKHPQRRFRP 420 Query: 65 G----------------DEVDV-------------------------------ALDAVED 77 G +V + + Sbjct: 421 GVVAELQKDKAVITLQPTQVRALLSLNNLANRRGVSLTQLRTSLKTDEKLQDLVVVSRNP 480 Query: 78 GFGETLLSREKAKRHEAWIT---LEKAYEDAETVTGVINGKVKGGFTVEL-NGIRAFLPG 133 G L++ + ++ + + V G + + G V+L + I L Sbjct: 481 EKGFVLVATKPKEKESLLQKGSLNLDTIQVGQVVGGRVLRHGRQGALVKLTSSISGTLHP 540 Query: 134 SLV-DVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAV-----IESENSAERDQLLE 187 + D L+ V+ +D+ + + +S R + + Sbjct: 541 TDTCDDFDSGRAFPPVDSILKAVVLSIDRDKRQLTLSTRPSRLYPDQAKDVKDHEVDGVS 600 Query: 188 NLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVL 246 +L+ G V+G +KN+ ++G FV LG +D + I ++ + VK + +VL Sbjct: 601 DLKVGQTVRGFIKNVAEHGIFVMLGRHIDARVQIKELFDEYVKDWKSHFAANQLVKGRVL 660 Query: 247 KFDRERTRVSLGLKQLG---EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI-EEGVEG 302 D ++ +V + + + + EG K+ GRV + DYG F+EI + G Sbjct: 661 SVDFDKKQVEMTFRSGDLKRDARSQSTLADLSEGQKVDGRVKKIEDYGLFIEIAGSKLSG 720 Query: 303 LVHVSEMDWTN--KNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQ 348 L H SE+ + D V+ ++L ID E+RRIS GLK Sbjct: 721 LCHKSELSDNKDADVTLALRSFRENDQVKAVILSIDREKRRISFGLKP 768 Score = 118 bits (297), Expect = 4e-25, Method: Composition-based stats. Identities = 57/389 (14%), Positives = 122/389 (31%), Gaps = 34/389 (8%) Query: 153 EFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG 212 + V+ + R + +L+ G + VK++ D+G +DLG Sbjct: 57 DASVLGRARDEVQKASRRIELSLIPEKVNASVSKSDLRAGFTLSAAVKSIEDHGYILDLG 116 Query: 213 --GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAI 270 V G L + + VG I V V+K ++ + Sbjct: 117 IPDVSGFLSFKEAKKGPFGD-DNKLPVGRLIDVCVVKITGNGRTCTVSVDSASVRDASLS 175 Query: 271 A----KRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGD 326 GT + VT + G +++ G + + + + VG Sbjct: 176 EVASVTSILPGTLVQSLVTAVVPDGLNLQVLGYFVGTIDQFHL----RAGDVEENYKVGQ 231 Query: 327 VVEVMVL-DIDEE----------RRRISLGLKQC---KANPWQQFAETHNKGDRVEG-KI 371 ++ +L D+ + L K + + + G +E K+ Sbjct: 232 KIKARILYDVSPSTPPRFALSVVEHVLKLSPKHAAGSDGSKDSSLQDAYPVGAILEAVKV 291 Query: 372 KSI-TDFGIFIGLDGGIDGLVHLSDISWNVAG--EEAVREYKKGDEIAAVVLQVDAERER 428 + + G+ + + G++G VH+S +S + +K G A V Sbjct: 292 VRVEAERGLVVEISSGLEGFVHISQVSDEHVPSLSPSSGHWKVGTVHKARVTGHFHLDGC 351 Query: 429 ISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRV 488 + L + + V + G ++ G V + V ++ V+G + + + + Sbjct: 352 LQLSFRPSVLEQKFLQVGEVQVGELIKGTVKRLTESALFVSMSGSVDGVVWPNHYADIAL 411 Query: 489 EDATLVLSVGDEVEAKFTGVDRKNRAISL 517 + G + + I+L Sbjct: 412 KHPQRRFRPG-----VVAELQKDKAVITL 435 >UniRef50_A5DPT1 Putative uncharacterized protein n=2 Tax=Pichia guilliermondii RepID=A5DPT1_PICGU Length = 1674 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 100/566 (17%), Positives = 213/566 (37%), Gaps = 48/566 (8%) Query: 22 SIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQ---VGDEVDVALDAVEDG 78 ++ G + ++ + V G K + A+ E ++ V + +++ Sbjct: 759 KVLTGYIKSVTNLGLFVAFGGKLTGLVLAKYATKNPNEDILKRFYKNQSVSCRVIRLDNE 818 Query: 79 FGETLLSREK----------AKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL---- 124 LLS + ++ L Y I V+L Sbjct: 819 NKRFLLSLDSEDKSEHGQELVNPVDSTKKLITDYTPGAKTQAKIKSIKGTQLNVQLADNL 878 Query: 125 ----NGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLD--QKRNNVVVSRRAVIESEN 178 + + F S + + + + + L +V+ + + +S R + Sbjct: 879 QGRLDITQCFEKWSDIKDKNQPLSQFHKDEILSVRVLGYHDAKNHTFLPISHRKSKNTIL 938 Query: 179 S-----AERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKR--VKH 230 + +++++ G E V NL +V + V G + D++ + + Sbjct: 939 ELTLLEKDPITEIKDVKVGSEHVAFVNNLARGFVWVSMSLSVKGRVSFMDLSDEVSIFED 998 Query: 231 PSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDY 290 + +G I KV + D E + L ++ + + + RV + Sbjct: 999 LENRLPIGAAIKAKVKQIDEEHKNIILTSRKHTVTKF----EDVELNKQYPARVLKVLPS 1054 Query: 291 GCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCK 350 VE+ V ++++ + + ++V + D VL +D++ ++IS+ L+ K Sbjct: 1055 FVLVELAHDVVASSYITD-ALNDYSSALNEVFHANDYTTATVLAVDKDSKKISVSLRTNK 1113 Query: 351 A-NPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREY 409 A + E +GD V+G +K++ + G+++ L + GLV +SD+S + ++ + + Sbjct: 1114 AVDKVINSVEDLQRGDVVKGFVKNVANNGVYVSLGRSVHGLVRVSDLSDSY-LKDWKKYF 1172 Query: 410 KKGDEIAAVVLQVDAERERISLGVKQLA---EDPFNNWVALNKKGAIVTGKVTAVDAKGA 466 K+ + V+ E R+ + +K+ E K+G + G V V G Sbjct: 1173 KQHQPVVGKVVNC-KEEGRVLITLKESEVNGELNVLKKFEDLKEGEVYEGSVRQVTDFGV 1231 Query: 467 TVELAD--GVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDE 524 V+L V G SE + ++ D + GD V+ K G++ + + +SL ++ Sbjct: 1232 FVKLDGTLNVSGLCHHSEVADNKDVDVKALFGEGDRVKVKILGINSEKKQLSLGMKVSYF 1291 Query: 525 ADEKDAIATVNKQEDANFSNNAMAEA 550 A E AT N+ D + EA Sbjct: 1292 APE----ATQNEDSDDDVEMAESEEA 1313 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 89/527 (16%), Positives = 196/527 (37%), Gaps = 39/527 (7%) Query: 27 VVVAIDKDVVLVDAGLKS-ESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGFGETLLS 85 V+ +D + + V G S + + + + VG + + + G L+ Sbjct: 403 EVIGLDSNYIFVSTGTSSYHGQVHISKINQEKVIDDYFVGSKHKARVIGLNKFEGLLTLT 462 Query: 86 REKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVE---LNGIRAFLPGSLVDVRPV- 141 + ++ + G I + G ++ N AF+P + + Sbjct: 463 MDPKIIDTKFMVPSQIPVGEYINGGEIIKVLPDGAGIQVKIFNDFDAFVPPEHMSDVRLV 522 Query: 142 -RDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVK 200 + + G +++ +V+K+ + + ++ + + + E E+ + G++ V+ Sbjct: 523 YPERKYKVGSKIKGRVLKVH--GSKIFITLKKTLVNIEDDEVLSNFESAEIGLKTPATVE 580 Query: 201 NLTDYGAFVD-LGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGL 259 GA V G + L +++ VK + + G + V+++ D + R+ + L Sbjct: 581 KFVHNGAIVSFFGNLRAFLPKNEISETFVKDAKDFLKKGQTVNVRIMDRDETQQRLIVTL 640 Query: 260 KQ--LGEDPWVAIAKRYPEGTKLTGRVTNLT--DYGCFVEIEE-GVEGLVHVSEMDWTNK 314 KQ + + A++ P T + + + VEIE + G+++ ++ N Sbjct: 641 KQNDVTKAQQSAVSSVVPGKTIVEASIVEKSKDKDSVIVEIEGSNLRGVIYAGQLSDGNY 700 Query: 315 --NIHPSKVVNVGDVVEVMVLDIDEERRRISLG-----LKQCKANPWQQFAETHNKGDRV 367 K + GD +E +VL+ D + R + L + K N D+V Sbjct: 701 EQTRALYKKIQAGDKLEAVVLERDMKTRSVILSAKQSFINGAKNNQIPSQFSDVTVSDKV 760 Query: 368 -EGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAER 426 G IKS+T+ G+F+ G + GLV L+ + E+ ++ + K ++ V+++D E Sbjct: 761 LTGYIKSVTNLGLFVAFGGKLTGLV-LAKYATKNPNEDILKRFYKNQSVSCRVIRLDNEN 819 Query: 427 ERISLGVKQLAEDPFNNW-----------VALNKKGAIVTGKVTAVDAKGATVELADGVE 475 +R L + + + GA K+ ++ V+LAD ++ Sbjct: 820 KRFLLSLDSEDKSEHGQELVNPVDSTKKLITDYTPGAKTQAKIKSIKGTQLNVQLADNLQ 879 Query: 476 GYLRASEASRDR-----VEDATLVLSVGDEVEAKFTGVDRKNRAISL 517 G L ++ + + + G L Sbjct: 880 GRLDITQCFEKWSDIKDKNQPLSQFHKDEILSVRVLGYHDAKNHTFL 926 Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 99/550 (18%), Positives = 201/550 (36%), Gaps = 32/550 (5%) Query: 7 QLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAG-LKSESAIPAEQFKNAQGEL-EIQV 64 + ES+++ + PG++++ VV+++ V+++ G I ++ NA +L + Sbjct: 200 ENVNESIEDEDLIPGNLLQCSVVSVEDRGVILNTGVSGKSGFISNKELSNANIDLQSLSE 259 Query: 65 G----DEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 G + S K + I+ A + V ++ K G Sbjct: 260 GYVMMTSIAAKPTTRTISLRPATSSVSSKKNKVSNISSVDAIQPGIIVDALVAEITKEGI 319 Query: 121 TVELNG-IRAFLPGSLVDVRPVRDTLHL--EGKELEFKVIKL--DQKRNNVVVSRRAVIE 175 T ++ G + + S + + H G ++ +VI + +V+S I Sbjct: 320 TTKVFGMVDGTISLSNIGEYDLDSLNHKFTIGNSIKARVIAVLLKGGTKKLVLSILPRIL 379 Query: 176 SENSAERDQLLENLQEGMEVK-GIVKNLTDYGAFVDLG--GVDGLLHITDMAWKRVKHPS 232 S +S E LE G V L FV G G +HI+ + ++V Sbjct: 380 SLDSQENTDALEAFPIGFVFDQVEVIGLDSNYIFVSTGTSSYHGQVHISKINQEKV--ID 437 Query: 233 EIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGT-KLTGRVTNLTDYG 291 + VG + +V+ ++ ++L + D + + P G G + + G Sbjct: 438 DYF-VGSKHKARVIGLNKFEGLLTLTMDPKIIDTKFMVPSQIPVGEYINGGEIIKVLPDG 496 Query: 292 CF--VEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISL--GLK 347 V+I + V M P + VG ++ VL + + I+L L Sbjct: 497 AGIQVKIFNDFDAFVPPEHMSDVRLVY-PERKYKVGSKIKGRVLKVHGSKIFITLKKTLV 555 Query: 348 QCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVR 407 + + E+ G + ++ G + G + + ++IS ++A Sbjct: 556 NIEDDEVLSNFESAEIGLKTPATVEKFVHNGAIVSFFGNLRAFLPKNEISETFV-KDAKD 614 Query: 408 EYKKGDEIAAVVLQVDAERERISLGVKQLA--EDPFNNWVALNKKGAIVTGKV--TAVDA 463 KKG + ++ D ++R+ + +KQ + + ++ IV + + D Sbjct: 615 FLKKGQTVNVRIMDRDETQQRLIVTLKQNDVTKAQQSAVSSVVPGKTIVEASIVEKSKDK 674 Query: 464 KGATVELAD-GVEGYLRASEASRDRVEDATLVLSV---GDEVEAKFTGVDRKNRAISLSV 519 VE+ + G + A + S E + GD++EA D K R++ LS Sbjct: 675 DSVIVEIEGSNLRGVIYAGQLSDGNYEQTRALYKKIQAGDKLEAVVLERDMKTRSVILSA 734 Query: 520 RAKDEADEKD 529 + K+ Sbjct: 735 KQSFINGAKN 744 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 86/599 (14%), Positives = 192/599 (32%), Gaps = 63/599 (10%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN--------------- 55 ESL + PG+ V G + ++K + + G +P + Sbjct: 84 ESLSFKKLFPGTTVLGQISKVNKLDLEIAIGDNLIGYVPISSISDEITRKVELYQQESDS 143 Query: 56 --------------------AQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAW 95 + + G+ + + E + + + Sbjct: 144 SEDEEEEGVTRTATMKDNELPDLQSIFKAGEWLRAKVTEAELSQSKKKRIQFTIEPENVN 203 Query: 96 ITLEKA-YEDAETVTGVINGKVKGGFTVE--LNGIRAFLPGSLVDVRPVRDTLHLEGKEL 152 ++E + + G + ++G F+ + + EG + Sbjct: 204 ESIEDEDLIPGNLLQCSVVSVEDRGVILNTGVSGKSGFISNKELSNANIDLQSLSEGYVM 263 Query: 153 EFKVI-KLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL 211 + K + ++ + +V +N ++ +Q G+ V +V +T G + Sbjct: 264 MTSIAAKPTTRTISLRPATSSVSSKKNKVSNISSVDAIQPGIIVDALVAEITKEGITTKV 323 Query: 212 GG-VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERT--RVSLGLKQ----LGE 264 G VDG + ++++ + + +G+ I +V+ + ++ L + L Sbjct: 324 FGMVDGTISLSNIGEYDLDSLNHKFTIGNSIKARVIAVLLKGGTKKLVLSILPRILSLDS 383 Query: 265 DPWVAIAKRYPEGTKLT-GRVTNLTDYGCFVEIE-EGVEGLVHVSEMDWTNKNIHPSKVV 322 + +P G V L FV G VH+S+++ Sbjct: 384 QENTDALEAFPIGFVFDQVEVIGLDSNYIFVSTGTSSYHGQVHISKINQEKVI----DDY 439 Query: 323 NVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEG-KIKSITDFGI-- 379 VG + V+ +++ ++L + + G+ + G +I + G Sbjct: 440 FVGSKHKARVIGLNKFEGLLTLTMDPKIIDTKFMVPSQIPVGEYINGGEIIKVLPDGAGI 499 Query: 380 FIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVK----Q 435 + + D V +S R+YK G +I VL+V +I + +K Sbjct: 500 QVKIFNDFDAFVPPEHMSDVRLV-YPERKYKVGSKIKGRVLKV--HGSKIFITLKKTLVN 556 Query: 436 LAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVL 495 + +D + + G V GA V + +L +E S V+DA L Sbjct: 557 IEDDEVLSNFESAEIGLKTPATVEKFVHNGAIVSFFGNLRAFLPKNEISETFVKDAKDFL 616 Query: 496 SVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAA 554 G V + D + + ++++ D + + + + ++ E K Sbjct: 617 KKGQTVNVRIMDRDETQQRLIVTLKQNDVTKAQQSAVS-SVVPGKTIVEASIVEKSKDK 674 Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats. Identities = 77/359 (21%), Positives = 148/359 (41%), Gaps = 24/359 (6%) Query: 16 IETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN-----AQGELEIQVGDEVDV 70 + + GS V + + V V L + + + E + +G + Sbjct: 952 KDVKVGSEHVAFVNNLARGFVWVSMSLSVKGRVSFMDLSDEVSIFEDLENRLPIGAAIKA 1011 Query: 71 ALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRA 129 + +++ +L+ K + + E + + + VEL + A Sbjct: 1012 KVKQIDEEHKNIILTSRKHTVTKF-----EDVELNKQYPARVLKVLPSFVLVELAHDVVA 1066 Query: 130 --FLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLE 187 ++ +L D + + V+ +D+ + VS R ++ + +E Sbjct: 1067 SSYITDALNDYSSALNEVFHANDYTTATVLAVDKDSKKISVSLRT---NKAVDKVINSVE 1123 Query: 188 NLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVL 246 +LQ G VKG VKN+ + G +V LG V GL+ ++D++ +K + + KV+ Sbjct: 1124 DLQRGDVVKGFVKNVANNGVYVSLGRSVHGLVRVSDLSDSYLKDWKKYFKQHQPVVGKVV 1183 Query: 247 KFDRERTRVSLGLKQLGEDPWVAIAKRY---PEGTKLTGRVTNLTDYGCFVEIEE--GVE 301 +E RV + LK+ + + + K++ EG G V +TD+G FV+++ V Sbjct: 1184 NC-KEEGRVLITLKESEVNGELNVLKKFEDLKEGEVYEGSVRQVTDFGVFVKLDGTLNVS 1242 Query: 302 GLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAET 360 GL H SE+ + GD V+V +L I+ E++++SLG+K P E Sbjct: 1243 GLCHHSEVADNKDV-DVKALFGEGDRVKVKILGINSEKKQLSLGMKVSYFAPEATQNED 1300 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 51/262 (19%), Positives = 96/262 (36%), Gaps = 11/262 (4%) Query: 14 KEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQG---ELEIQVGDEVDV 70 K + V+ + VLV+ ++ N D Sbjct: 1034 KFEDVELNKQYPARVLKVLPSFVLVELAHDVVASSYITDALNDYSSALNEVFHANDYTTA 1093 Query: 71 ALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRA 129 + AV+ + +S K + I + + + V G + G V L + Sbjct: 1094 TVLAVDKDSKKISVSLRTNKAVDKVINSVEDLQRGDVVKGFVKNVANNGVYVSLGRSVHG 1153 Query: 130 FLPGSLVDVRPVRDTLHLEGKELEF--KVIKLDQKRNNVVVSRRAVIESENSAERDQLLE 187 + S + ++D + KV+ ++ ++ E + E Sbjct: 1154 LVRVSDLSDSYLKDWKKYFKQHQPVVGKVVNCKEEGRVLITL--KESEVNGELNVLKKFE 1211 Query: 188 NLQEGMEVKGIVKNLTDYGAFVDLGG---VDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 +L+EG +G V+ +TD+G FV L G V GL H +++A + + GD + VK Sbjct: 1212 DLKEGEVYEGSVRQVTDFGVFVKLDGTLNVSGLCHHSEVADNKDVDVKALFGEGDRVKVK 1271 Query: 245 VLKFDRERTRVSLGLKQLGEDP 266 +L + E+ ++SLG+K P Sbjct: 1272 ILGINSEKKQLSLGMKVSYFAP 1293 Score = 80.4 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 23/180 (12%), Positives = 61/180 (33%), Gaps = 9/180 (5%) Query: 13 LKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL---EIQVGDEVD 69 + + G +V+G V + + V V G + ++ + + V Sbjct: 1120 NSVEDLQRGDVVKGFVKNVANNGVYVSLGRSVHGLVRVSDLSDSYLKDWKKYFKQHQPVV 1179 Query: 70 VALDA-VEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNG-- 126 + E+G L + + + ++ E G + G V+L+G Sbjct: 1180 GKVVNCKEEGRVLITLKESEVNGELNVLKKFEDLKEGEVYEGSVRQVTDFGVFVKLDGTL 1239 Query: 127 -IRAFLPGSLVDVRPVRDTLHLEGK--ELEFKVIKLDQKRNNVVVSRRAVIESENSAERD 183 + S V D L G+ ++ K++ ++ ++ + + + + + + + Sbjct: 1240 NVSGLCHHSEVADNKDVDVKALFGEGDRVKVKILGINSEKKQLSLGMKVSYFAPEATQNE 1299 >UniRef50_Q6BJC7 DEHA2G03410p n=4 Tax=Saccharomycetales RepID=Q6BJC7_DEBHA Length = 1716 Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats. Identities = 102/587 (17%), Positives = 220/587 (37%), Gaps = 58/587 (9%) Query: 15 EIETRP-GSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQV---GDEVDV 70 + + ++ G + ++ + + K + A+ + E + V Sbjct: 769 FKDIKVDNKMLHGYIKSVTNMGLFISFAGKLTGLVLAKYATDKPDEDLSKKFYKYQSVSC 828 Query: 71 ALDAVEDGFGETLLSREKAKRHEAWITLEKA-------------YEDAETVTGVINGKVK 117 + +++ LLS +K++ + E+ Y + V+ Sbjct: 829 RVIRIDEENKRFLLSLKKSENSKDSSNTEEVINPIDSEKSTVGDYTPGVITSAVVKSIKG 888 Query: 118 GGFTVE--------LNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLD--------- 160 V+ ++ + F S + + + + +++ KVI Sbjct: 889 TQLNVQLADNLQGRVDITQCFNSWSEIKDKKQPLSQFHKNDKIKVKVIGFHDAKTHRFLP 948 Query: 161 ---QKRNNVVVSRRAVIESENSAERDQL----LENLQEGMEVKGIVKNLTDYGAFVDL-G 212 +K N +V +++E E + L N EG + + N+ +V + Sbjct: 949 ITHRKSNKNIVLELSILEKELKTPDEPYHMLNLSNTSEGSKWVAYINNVAKGFVWVSITP 1008 Query: 213 GVDGLLHITDMAWKR--VKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAI 270 + G + +++ + +G I V D + V L + + + Sbjct: 1009 TIKGRISFMELSDDVSVFDDIENKLPIGMAIEATVKDIDNDHNTVVLSAR----NSTMGT 1064 Query: 271 AKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEV 330 K G KL RV + D VE+ + + +++ + V + D Sbjct: 1065 VKDVKVGDKLPARVLKVRDTFVLVELGKNLVASSFITD-ALNDYTEKLENVFHTNDFCTA 1123 Query: 331 MVLDIDEERRRISLGLKQCKA-NPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDG 389 VL +DEE ++I++ L+ A + E N+GD + G +K++ + G++I L I Sbjct: 1124 TVLAVDEESKKIAVSLRNDDATDKVIDSIEDLNRGDIIRGFVKNVANNGVYIALGRSIHA 1183 Query: 390 LVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLA---EDPFNNWVA 446 LV ++D+S + ++ + +K I + E RI + +K+ E Sbjct: 1184 LVRITDLSDSF-LKDWKKYFKPHQPIIGKISSC-KEEGRILMTLKESEINGELNVLKKFE 1241 Query: 447 LNKKGAIVTGKVTAVDAKGATVELAD--GVEGYLRASEASRDRVEDATLVLSVGDEVEAK 504 + G I G V V GA ++L + G S+ S + VE+ + + GD V+ K Sbjct: 1242 DLEVGEIFEGSVRRVTDFGAFIKLDGTVNISGLCHHSQISDNDVENVSSLFGEGDRVKVK 1301 Query: 505 FTGVDRKNRAISLSVRAKDEADEKDAIATVNKQ-EDANFSNNAMAEA 550 +D++ + +SL ++A + + + + DAN N++ +E+ Sbjct: 1302 ILAIDQEKKQLSLGMKASYFTNADASSEQDDVEMSDANDQNDSGSES 1348 Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats. Identities = 80/554 (14%), Positives = 198/554 (35%), Gaps = 40/554 (7%) Query: 14 KEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQG---ELEIQVGDEVDV 70 PG +V +V I K+ ++ ++ I + + + +G+ + Sbjct: 313 SVDSIEPGILVDALVSDITKNGIVTKVFGLVDATINLPNLNDFDLQTLKHKYTIGNNIKA 372 Query: 71 ALDAVEDGFGETLLSREKAKRHEAWITLE-------KAYEDAETVT-GVINGKVKGGFTV 122 + + G L + ++ + A+ + G V Sbjct: 373 RVTGILLKSGTKRLMLSQLPHIISFSSSPSDDSSALDAFPIGHIFEEVEVKGSDPNYVFV 432 Query: 123 ELNG--IRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 + + S +D + + G + + +VI + N +V++ +E + Sbjct: 433 GFGSSTLHGQVHNSKIDPSKNLEIDYSVGSKHKARVIGYNSIENLLVLT----MEPKVID 488 Query: 181 ERDQLLENLQEGMEVKG-IVKNLTDY--GAFVDL-GGVDGLLHITDMAWKRVKHPSEIVN 236 + +++ G V G + + G V + G + L+ M+ R+ +P Sbjct: 489 SKFLTTDDIPVGEFVNGAEIVKVLPDSGGIIVKILNGFEALVPGNHMSDVRLVYPERKFK 548 Query: 237 VGDEITVKVLKFDRERTRVSLGLKQ----LGEDPWVAIAKRYPEGTKLTGRVTNLTDYGC 292 VG ++ +VL+ ++ ++ LK+ + +D + + G K V G Sbjct: 549 VGGKVKGRVLR--KQGRKLFFTLKKSLVNIEDDEILTGFDKATVGFKSPATVEKFVHNGA 606 Query: 293 FVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQ---C 349 V + + +E+ T S + +G V V +L+++++ +R+ + L+Q Sbjct: 607 IVSFFGNLRAYLPKNEISET-FVNQASDHLKIGQTVNVKILNVNKDDQRLMVTLRQSIDL 665 Query: 350 KANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDG-GIDGLVHLSDISWNVAGEE--AV 406 + ++ + + + + L+ + G++ +S + Sbjct: 666 SDSQKATISDLYPGKSITTAIVVEKVKESVIVELENSNLRGVIFSGHLSDGNYEQNRSIF 725 Query: 407 REYKKGDEIAAVVLQVDAERERISLGVKQL-----AEDPFNNWVALNKK-GAIVTGKVTA 460 ++ GD+I +VL+ D + +++ K +D + K ++ G + + Sbjct: 726 KKLPIGDKIDVLVLEKDLKSRSVTVSAKASLIEAAKQDEVPAYFKDIKVDNKMLHGYIKS 785 Query: 461 VDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 V G + A + G + A A+ ED + V + +D +N+ LS++ Sbjct: 786 VTNMGLFISFAGKLTGLVLAKYATDKPDEDLSKKFYKYQSVSCRVIRIDEENKRFLLSLK 845 Query: 521 AKDEADEKDAIATV 534 + + + V Sbjct: 846 KSENSKDSSNTEEV 859 Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 92/571 (16%), Positives = 215/571 (37%), Gaps = 40/571 (7%) Query: 7 QLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAG-LKSESAIPAEQFKNAQ--GELEIQ 63 ++ +L++ + PG++++ + +I+ V+++ G I ++ KN++ ++ Sbjct: 215 EVVNATLEDEDLTPGNLLQCSIKSIEDHGVILNVGRSNFSGFISNKELKNSKDIEAEDLN 274 Query: 64 VGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLE-----KAYEDAETVTGVINGKVKG 118 VGD + ++ + L ++ ++ + E V +++ K Sbjct: 275 VGDVLLTSIVSK-PSSRTITLRPVQSNSTSKKASVSTISSVDSIEPGILVDALVSDITKN 333 Query: 119 GFTVELNG-IRAFLPGSLVDVRPVRDTLHL--EGKELEFKVIKL----DQKRNNVVVSRR 171 G ++ G + A + ++ ++ H G ++ +V + KR + Sbjct: 334 GIVTKVFGLVDATINLPNLNDFDLQTLKHKYTIGNNIKARVTGILLKSGTKRLMLSQLPH 393 Query: 172 AVIESENSAERDQLLENLQEGMEV-KGIVKNLTDYGAFVDLGG--VDGLLHITDMAWKRV 228 + S + ++ L+ G + VK FV G + G +H + + Sbjct: 394 IISFSSSPSDDSSALDAFPIGHIFEEVEVKGSDPNYVFVGFGSSTLHGQVHNSKI--DPS 451 Query: 229 KHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTG-RVTNL 287 K+ +VG + +V+ ++ + L ++ D P G + G + + Sbjct: 452 KNLEIDYSVGSKHKARVIGYNSIENLLVLTMEPKVIDSKFLTTDDIPVGEFVNGAEIVKV 511 Query: 288 TD--YGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISL- 344 G V+I G E LV + M +P + VG V+ VL ++ R++ Sbjct: 512 LPDSGGIIVKILNGFEALVPGNHMSDVRLV-YPERKFKVGGKVKGRVLR--KQGRKLFFT 568 Query: 345 ---GLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVA 401 L + + + G + ++ G + G + + ++IS Sbjct: 569 LKKSLVNIEDDEILTGFDKATVGFKSPATVEKFVHNGAIVSFFGNLRAYLPKNEISETFV 628 Query: 402 GEEAVREYKKGDEIAAVVLQVDAERERISLGVKQL---AEDPFNNWVALNKKGAIVTGKV 458 + A K G + +L V+ + +R+ + ++Q ++ L +I T V Sbjct: 629 NQ-ASDHLKIGQTVNVKILNVNKDDQRLMVTLRQSIDLSDSQKATISDLYPGKSITTAIV 687 Query: 459 TAVDAKGATVELAD-GVEGYLRASEASRDRVEDATLVLS---VGDEVEAKFTGVDRKNRA 514 + VEL + + G + + S E + +GD+++ D K+R+ Sbjct: 688 VEKVKESVIVELENSNLRGVIFSGHLSDGNYEQNRSIFKKLPIGDKIDVLVLEKDLKSRS 747 Query: 515 ISLSVRA-KDEADEKDAIATVNKQEDANFSN 544 +++S +A EA ++D + K + Sbjct: 748 VTVSAKASLIEAAKQDEVPAYFKDIKVDNKM 778 Score = 181 bits (459), Expect = 8e-44, Method: Composition-based stats. Identities = 83/611 (13%), Positives = 183/611 (29%), Gaps = 73/611 (11%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE----------- 59 E+ PG+ V G + I K + + G IP E Sbjct: 90 ENFNFKNLIPGTQVLGQITNIGKLDLTLSVGDNLVGYIPITSISEEITEQIEKFEEADDD 149 Query: 60 ----------------------------------LEIQVGDEVDVALDAVEDGFGETLLS 85 ++G + + + + Sbjct: 150 SEDEEELQYDDDEKDQEIQTATLKTKNAEFPVLKEIFKIGQWLRAKVVKPSSDSKKKRIQ 209 Query: 86 REKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN--GIRAFLPGSLVDVRPVRD 143 ++ + I G + + F+ + + Sbjct: 210 LSIEPEVVNATLEDEDLTPGNLLQCSIKSIEDHGVILNVGRSNFSGFISNKELKNSKDIE 269 Query: 144 TLHL-EGKEL-EFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKN 201 L G L V K + + + + S +++++ G+ V +V + Sbjct: 270 AEDLNVGDVLLTSIVSKPSSRTITLRPVQSNSTSKKASVSTISSVDSIEPGILVDALVSD 329 Query: 202 LTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRE--RTRVSLG 258 +T G + G VD +++ ++ ++ +G+ I +V + R+ L Sbjct: 330 ITKNGIVTKVFGLVDATINLPNLNDFDLQTLKHKYTIGNNIKARVTGILLKSGTKRLMLS 389 Query: 259 ------LKQLGEDPWVAIAKRYPEGTKLT-GRVTNLTDYGCFVEIEEG-VEGLVHVSEMD 310 + +P G V FV + G VH S++ Sbjct: 390 QLPHIISFSSSPSDDSSALDAFPIGHIFEEVEVKGSDPNYVFVGFGSSTLHGQVHNSKI- 448 Query: 311 WTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEG- 369 + + + +VG + V+ + + L ++ + + G+ V G Sbjct: 449 --DPSKNLEIDYSVGSKHKARVIGYNSIENLLVLTMEPKVIDSKFLTTDDIPVGEFVNGA 506 Query: 370 KIKSITD--FGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERE 427 +I + GI + + G + LV + +S R++K G ++ VL+ + Sbjct: 507 EIVKVLPDSGGIIVKILNGFEALVPGNHMSDVRLV-YPERKFKVGGKVKGRVLR--KQGR 563 Query: 428 RISLGVK----QLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEA 483 ++ +K + +D G V GA V + YL +E Sbjct: 564 KLFFTLKKSLVNIEDDEILTGFDKATVGFKSPATVEKFVHNGAIVSFFGNLRAYLPKNEI 623 Query: 484 SRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFS 543 S V A+ L +G V K V++ ++ + +++R + + + + + Sbjct: 624 SETFVNQASDHLKIGQTVNVKILNVNKDDQRLMVTLRQSIDLSDSQKATISDLYPGKSIT 683 Query: 544 NNAMAEAFKAA 554 + E K + Sbjct: 684 TAIVVEKVKES 694 >UniRef50_B9WAR4 rRNA biogenesis protein, putative n=5 Tax=Saccharomycetales RepID=B9WAR4_CANDC Length = 1715 Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats. Identities = 97/572 (16%), Positives = 213/572 (37%), Gaps = 55/572 (9%) Query: 14 KEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQV---GDEVDV 70 + ++V+G V ++ + V + I A+ E + ++ Sbjct: 763 DFNDVTVNAVVKGYVKSVTSLGLFVTFTGRLTGLILAKYVTKNAKEDLSKKFYKYQSINC 822 Query: 71 ALDAVEDGFGETLLSREKAKRHEAWIT------------LEKAYEDAETVTGVINGKVKG 118 + +V+ LL+ + + Y+ ET VI Sbjct: 823 RVLSVDKENERFLLALNNSSSSFTKDDEQLIKPIDTTKKIVADYQPGETTKAVIRAVKGT 882 Query: 119 GFTVEL-NGIRAFLPGSLV--DVRPVRDTLHL------EGKELEFKVIKLD--QKRNNVV 167 V+L + ++ + + ++ +++ +G+ ++ KVI + + + Sbjct: 883 QLNVQLADNLQGRVDITQCFNSIKDIKNLHQPLASRFQKGETVDVKVIGVHDAKNHTFLP 942 Query: 168 VSRRAVIES------------ENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGV 214 ++ R + N D L++ ++G E+ V N+ + +V + + Sbjct: 943 ITHRKSNRTTILELSLTNPQINNKPLTDLKLKDFKQGDELLAFVNNIINGMVWVSISPSI 1002 Query: 215 DGLLHITDMAWK--RVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAK 272 G + + D+ + + +G+ I VKV + D + + L ++ ++ + Sbjct: 1003 KGRISMLDLTEDGSIFQDIDNKLPIGNAINVKVKQVDLQHQILVLTARE----NFIEKFE 1058 Query: 273 RYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMV 332 + R+ + VE+ V +++ + + V NV D V V Sbjct: 1059 DVKQDEIYPARIIKIKPNHVLVELGNNVIASSFLTD-ALDDYSEKLDHVFNVNDYVSAKV 1117 Query: 333 LDIDEERRRISLGLKQCKA--NPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGL 390 LDID +RIS+ L+ K + +G ++G +K+I++ G+++ L I L Sbjct: 1118 LDIDSINKRISVSLRTNKPTSDKVINSVGDLTRGQVIKGFVKNISNNGVYVSLGRSIYAL 1177 Query: 391 VHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLA---EDPFNNWVAL 447 V +SD+S + ++ +K + ++ + RI + +K+ + Sbjct: 1178 VRVSDLSDSY-LKDWQNFFKPNQPVIGKIVNC-KQEGRILMTLKESEVNGDLKIMKTFDD 1235 Query: 448 NKKGAIVTGKVTAVDAKGATVELAD--GVEGYLRASEASRDRVEDATLVLSVGDEVEAKF 505 + G I G VT+ G V+L V G SE S + V++ + GD V+ K Sbjct: 1236 LQIGDIFEGTVTSTTEFGVFVKLDGTVNVSGLCHHSEISENDVDNVKSLFGTGDRVKVKI 1295 Query: 506 TGVDRKNRAISLSVRAKDEADEKDAIATVNKQ 537 +D R +SL ++A + + Sbjct: 1296 LKIDPVKRQLSLGMKASYFISDSGKEDNDEED 1327 Score = 195 bits (495), Expect = 5e-48, Method: Composition-based stats. Identities = 89/533 (16%), Positives = 197/533 (36%), Gaps = 35/533 (6%) Query: 16 IETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE---IQVGDEVDVAL 72 +PG IV ++ + ++ ++ + I Q +N + +G V + Sbjct: 312 DSIQPGVIVDALINDVTENGLVTKVYGLVDGTIALSQIQNFDLKELKHKYAIGSTVKARV 371 Query: 73 DAV--EDGFGETLLSREKAKRHEAWITLEKAYEDAETV-----TGVINGKVKGGFTVELN 125 AV ++G + +LS + + +A + + G K V Sbjct: 372 LAVLLKNGTKKLILSILPHVLQLGDDSSQTQALEAFPIGHVFDEVKVIGNDKHYVYVSFG 431 Query: 126 GIRAF--LPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERD 183 F + S D + G + +VI ++ N +++ ES+ Sbjct: 432 SSSLFGQIHQSKFDDNK-TLLDYSIGSTHKSRVIGFNEVDNLLIL----SFESKVIDAEY 486 Query: 184 QLLENLQEGMEV-KGIVKNLTDYGAFVDL---GGVDGLLHITDMAWKRVKHPSEIVNVGD 239 + ++ G + + + + G +++ G + M+ ++ +P VG Sbjct: 487 LNVRDVPIGKLLPNVEILKVLEDGVGINVKFFDEFKGFVPGNQMSDIKLVYPERKFRVGT 546 Query: 240 EITVKVLKFDRERTRVSL--GLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE 297 + ++L ++ +R ++ L L +D ++ + G K V GC V Sbjct: 547 KTKGRLLNYNGKRALITFRKALVNLEDDEILSNIDQAEIGFKTNAIVEKFVPNGCIVSFF 606 Query: 298 EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKA--NPWQ 355 + + +E+ T S + VG +V+V +LDI++E++R+ + LKQ N + Sbjct: 607 GNLRAFLPKTEISET-FVEDASSYLKVGQIVKVRILDINKEQKRLVVTLKQSSELSNAQK 665 Query: 356 QFAETHNKGD-RVEGKIKSITDFGIFIGLDG-GIDGLVHLSDISWNVAGEE--AVREYKK 411 G V+ I T + + L+G + G+++ +S + + Sbjct: 666 NEINKLVSGKSIVKTVIVEKTKDSVLVELEGSHLRGVIYDGQLSDGNYEQNRALAKRLTI 725 Query: 412 GDEIAAVVLQVDAERERISLGVKQLAED-----PFNNWVALNKKGAIVTGKVTAVDAKGA 466 G+ + ++L D + + K+ + F A+V G V +V + G Sbjct: 726 GESLEVLILDKDLKARTVIATAKKSLIEALKSKSFPVDFNDVTVNAVVKGYVKSVTSLGL 785 Query: 467 TVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSV 519 V + G + A +++ ED + + + VD++N L++ Sbjct: 786 FVTFTGRLTGLILAKYVTKNAKEDLSKKFYKYQSINCRVLSVDKENERFLLAL 838 Score = 168 bits (426), Expect = 5e-40, Method: Composition-based stats. Identities = 77/615 (12%), Positives = 191/615 (31%), Gaps = 67/615 (10%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAE---------- 51 E+ + E+ GS V G + I+K + + G IP Sbjct: 80 EETTQSVLIETFNFKNLVSGSSVLGQIKTINKLDIGLALGDNLTGYIPITSISPQITALI 139 Query: 52 ---------------------------------QFKNAQGELEIQVGDEVDVALD-AVED 77 + + ++G + + + ED Sbjct: 140 EKFEEQEQEEEEEESDNADGNQETKSATFKSKTEKEFPDLLKIFKLGSWLKAKITTSNED 199 Query: 78 GFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNG--IRAFLPGSL 135 + + + + G ++ F+ Sbjct: 200 FKNKKRIELTIEPESVNESLEVDDLIVNNILQCSVKSIEDHGIILDTGKPEYSGFISNKE 259 Query: 136 VDVRPVRDTLHLEGKELEFKV-IKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGME 194 + + T + G + + K + N+ + +++ ++++Q G+ Sbjct: 260 LTNAKIDVTTIVPGLVILCSIATKPSSRTINLKPIVATISAKKSTVSTISSIDSIQPGVI 319 Query: 195 VKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERT 253 V ++ ++T+ G + G VDG + ++ + +K +G + +VL + Sbjct: 320 VDALINDVTENGLVTKVYGLVDGTIALSQIQNFDLKELKHKYAIGSTVKARVLAVLLKNG 379 Query: 254 --RVSLGLKQL-----GEDPWVAIAKRYPEGTKL-TGRVTNLTDYGCFVEIEEG-VEGLV 304 ++ L + + + +P G +V + +V + G + Sbjct: 380 TKKLILSILPHVLQLGDDSSQTQALEAFPIGHVFDEVKVIGNDKHYVYVSFGSSSLFGQI 439 Query: 305 HVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKG 364 H S+ D + ++G + V+ +E + L + + G Sbjct: 440 HQSKFDDNKTLLD----YSIGSTHKSRVIGFNEVDNLLILSFESKVIDAEYLNVRDVPIG 495 Query: 365 DRV-EGKIKSITDFGIF--IGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQ 421 + +I + + G+ + G V + +S + R+++ G + +L Sbjct: 496 KLLPNVEILKVLEDGVGINVKFFDEFKGFVPGNQMSD-IKLVYPERKFRVGTKTKGRLLN 554 Query: 422 VDAERERISL--GVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLR 479 + +R I+ + L +D + + + G V G V + +L Sbjct: 555 YNGKRALITFRKALVNLEDDEILSNIDQAEIGFKTNAIVEKFVPNGCIVSFFGNLRAFLP 614 Query: 480 ASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQED 539 +E S VEDA+ L VG V+ + ++++ + + ++++ E Sbjct: 615 KTEISETFVEDASSYLKVGQIVKVRILDINKEQKRLVVTLKQSSELSNAQKNEINKLVSG 674 Query: 540 ANFSNNAMAEAFKAA 554 + + E K + Sbjct: 675 KSIVKTVIVEKTKDS 689 Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 87/551 (15%), Positives = 200/551 (36%), Gaps = 32/551 (5%) Query: 7 QLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAG-LKSESAIPAEQFKNAQGELEIQVG 65 + ESL+ + +I++ V +I+ +++D G + I ++ NA+ ++ V Sbjct: 213 ESVNESLEVDDLIVNNILQCSVKSIEDHGIILDTGKPEYSGFISNKELTNAKIDVTTIVP 272 Query: 66 DEVDVALDAVEDGFGETLLSREKAKRHEAWITLE-----KAYEDAETVTGVINGKVKGGF 120 V + A + L A T+ + + V +IN + G Sbjct: 273 GLVILCSIATKPSSRTINLKPIVATISAKKSTVSTISSIDSIQPGVIVDALINDVTENGL 332 Query: 121 TVELNG-IRAFLPGSLVDVRPVRDTLHL--EGKELEFKVIKL---DQKRNNVVVSRRAVI 174 ++ G + + S + +++ H G ++ +V+ + + + ++ V+ Sbjct: 333 VTKVYGLVDGTIALSQIQNFDLKELKHKYAIGSTVKARVLAVLLKNGTKKLILSILPHVL 392 Query: 175 ESENSAERDQLLENLQEGMEV-KGIVKNLTDYGAFVDLGGVD--GLLHITDMAWKRVKHP 231 + + + + Q LE G + V + +V G G +H + + Sbjct: 393 QLGDDSSQTQALEAFPIGHVFDEVKVIGNDKHYVYVSFGSSSLFGQIHQSKFDDNKT--L 450 Query: 232 SEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLT-GRVTNLTDY 290 + ++G +V+ F+ + L + D + P G L + + + Sbjct: 451 LD-YSIGSTHKSRVIGFNEVDNLLILSFESKVIDAEYLNVRDVPIGKLLPNVEILKVLED 509 Query: 291 GC--FVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISL--GL 346 G V+ + +G V ++M P + VG + +L+ + +R I+ L Sbjct: 510 GVGINVKFFDEFKGFVPGNQMSDIKLVY-PERKFRVGTKTKGRLLNYNGKRALITFRKAL 568 Query: 347 KQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAV 406 + + + G + ++ G + G + + ++IS E+A Sbjct: 569 VNLEDDEILSNIDQAEIGFKTNAIVEKFVPNGCIVSFFGNLRAFLPKTEISETFV-EDAS 627 Query: 407 REYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKK---GAIVTGKVTAVDA 463 K G + +L ++ E++R+ + +KQ +E +NK +IV + Sbjct: 628 SYLKVGQIVKVRILDINKEQKRLVVTLKQSSELSNAQKNEINKLVSGKSIVKTVIVEKTK 687 Query: 464 KGATVELAD-GVEGYLRASEASR---DRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSV 519 VEL + G + + S ++ L++G+ +E D K R + + Sbjct: 688 DSVLVELEGSHLRGVIYDGQLSDGNYEQNRALAKRLTIGESLEVLILDKDLKARTVIATA 747 Query: 520 RAKDEADEKDA 530 + K Sbjct: 748 KKSLIEALKSK 758 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 73/349 (20%), Positives = 140/349 (40%), Gaps = 23/349 (6%) Query: 13 LKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA-----QGELEIQVGDE 67 LK + + G + V I +V V + I + ++ +G+ Sbjct: 971 LKLKDFKQGDELLAFVNNIINGMVWVSISPSIKGRISMLDLTEDGSIFQDIDNKLPIGNA 1030 Query: 68 VDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGI 127 ++V + V+ +L+ + + + + E I VEL Sbjct: 1031 INVKVKQVDLQHQILVLTARENFIEKF-----EDVKQDEIYPARIIKIKPNHVLVELGNN 1085 Query: 128 RA---FLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQ 184 FL +L D D + + KV+ +D + VS R S + Sbjct: 1086 VIASSFLTDALDDYSEKLDHVFNVNDYVSAKVLDIDSINKRISVSLR--TNKPTSDKVIN 1143 Query: 185 LLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITV 243 + +L G +KG VKN+++ G +V LG + L+ ++D++ +K + Sbjct: 1144 SVGDLTRGQVIKGFVKNISNNGVYVSLGRSIYALVRVSDLSDSYLKDWQNFFKPNQPVIG 1203 Query: 244 KVLKFDRERTRVSLGLKQLG---EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE-- 298 K++ ++ R+ + LK+ + + G G VT+ T++G FV+++ Sbjct: 1204 KIVNC-KQEGRILMTLKESEVNGDLKIMKTFDDLQIGDIFEGTVTSTTEFGVFVKLDGTV 1262 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLK 347 V GL H SE+ + + + GD V+V +L ID +R++SLG+K Sbjct: 1263 NVSGLCHHSEISEND-VDNVKSLFGTGDRVKVKILKIDPVKRQLSLGMK 1310 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 52/259 (20%), Positives = 100/259 (38%), Gaps = 12/259 (4%) Query: 13 LKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE---IQVGDEVD 69 K + + I ++ I + VLV+ G ++ + E V D V Sbjct: 1055 EKFEDVKQDEIYPARIIKIKPNHVLVELGNNVIASSFLTDALDDYSEKLDHVFNVNDYVS 1114 Query: 70 VALDAVEDGFGETLLSREKAKRHEAW-ITLEKAYEDAETVTGVINGKVKGGFTVELN-GI 127 + ++ +S K I + + G + G V L I Sbjct: 1115 AKVLDIDSINKRISVSLRTNKPTSDKVINSVGDLTRGQVIKGFVKNISNNGVYVSLGRSI 1174 Query: 128 RAFLPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQL 185 A + S + ++D + + + K++ Q+ ++ E + + Sbjct: 1175 YALVRVSDLSDSYLKDWQNFFKPNQPVIGKIVNCKQEGRILMTL--KESEVNGDLKIMKT 1232 Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLGG---VDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 ++LQ G +G V + T++G FV L G V GL H ++++ V + + GD + Sbjct: 1233 FDDLQIGDIFEGTVTSTTEFGVFVKLDGTVNVSGLCHHSEISENDVDNVKSLFGTGDRVK 1292 Query: 243 VKVLKFDRERTRVSLGLKQ 261 VK+LK D + ++SLG+K Sbjct: 1293 VKILKIDPVKRQLSLGMKA 1311 >UniRef50_A9NGK8 Small subunit ribosomal protein S1 n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NGK8_ACHLI Length = 470 Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats. Identities = 112/445 (25%), Positives = 208/445 (46%), Gaps = 21/445 (4%) Query: 18 TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE---IQVGDEVDVALDA 74 + G I+ G V + K+ VL+D +E I AE F E I+ GD+V ++ Sbjct: 7 PKKGQIIEGEVFQVKKNYVLLDINAATEGTIYAEYFDRPAPEDLRKVIKKGDKVRAKVEK 66 Query: 75 V--EDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLP 132 + +D +LSR + ++KA+++ + V+ G + GI FLP Sbjct: 67 ISEDDRSSLIMLSRLPLLHEKNMEKIQKAFDEKLEIETVVKSANDKGLVLNFEGIELFLP 126 Query: 133 GSLVDVRPVRDTLHLEGKELEFKVIKL--DQKRNNVVVSRRAVIESENSAERDQL----- 185 SL+D L G+ L + + D+KR ++ +R+ + E+ E+ Q Sbjct: 127 YSLLDFELKDQKDKLIGQSLVVLIEEFKADRKRPKLIATRKPIFEARRQEEQQQRQEARQ 186 Query: 186 --LENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITV 243 LE + G ++G+V++ + AFV V G+L I+ ++ R+ +++ +G ++ V Sbjct: 187 EELETITTGAVLEGVVESFETHAAFVRFEHVSGMLRISQVSHHRIDKIEDVLEIGQKVQV 246 Query: 244 KVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGL 303 KV+K +E R+ L +K L P+ A K + G + G+V + +G VE++ V+GL Sbjct: 247 KVIK--KEGNRLDLSMKALQPTPYEAYLKAHKVGETVKGKVVSKLPFGILVELDRDVKGL 304 Query: 304 VHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNK 363 +H SE W N + + + D +E ++L D ++ RISL K + NPW Sbjct: 305 LHKSEYSW-NPQSNFDAYIKIDDEIEAVILSKDAKKERISLSKKVLEDNPWA--KLNLRV 361 Query: 364 GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVD 423 G +E +I+ +T + + + +DG++ ++ + N Y+ GD + A V++ + Sbjct: 362 GQDIEVRIEEVTKEEVKVSFE-SVDGIIPKNE-AHNDPKVNIDEYYQVGDTVKAKVIEFN 419 Query: 424 AERERISLGVKQLAEDPFNNWVALN 448 + + L VK+L Sbjct: 420 KQNWVLKLSVKRLLNLQERQEFEKY 444 Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats. Identities = 105/477 (22%), Positives = 208/477 (43%), Gaps = 36/477 (7%) Query: 103 EDAETVTGVINGKVKGGFTVELNG-IRAFLPGSLVDVRPVRDTLHLE--GKELEFKVIKL 159 + + + G + K +++N + D D + G ++ KV K+ Sbjct: 8 KKGQIIEGEVFQVKKNYVLLDINAATEGTIYAEYFDRPAPEDLRKVIKKGDKVRAKVEKI 67 Query: 160 --DQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGL 217 D + + +++SR ++ +N + + + E ++ +VK+ D G ++ G++ Sbjct: 68 SEDDRSSLIMLSRLPLLHEKNMEKIQKAFDEKLE---IETVVKSANDKGLVLNFEGIELF 124 Query: 218 LHITDMAWKRVKHPSEIVNVGDEITVKVLKF--DRERTRVSLGLKQL-----------GE 264 L + + +K + + +G + V + +F DR+R ++ K + + Sbjct: 125 LPYS-LLDFELKDQKDKL-IGQSLVVLIEEFKADRKRPKLIATRKPIFEARRQEEQQQRQ 182 Query: 265 DPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNV 324 + + G L G V + + FV E V G++ +S++ ++ V+ + Sbjct: 183 EARQEELETITTGAVLEGVVESFETHAAFVRFE-HVSGMLRISQVSH-HRIDKIEDVLEI 240 Query: 325 GDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLD 384 G V+V V I +E R+ L +K + P++ + + H G+ V+GK+ S FGI + LD Sbjct: 241 GQKVQVKV--IKKEGNRLDLSMKALQPTPYEAYLKAHKVGETVKGKVVSKLPFGILVELD 298 Query: 385 GGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNW 444 + GL+H S+ SWN K DEI AV+L DA++ERISL K L ++P+ Sbjct: 299 RDVKGLLHKSEYSWN-PQSNFDAYIKIDDEIEAVILSKDAKKERISLSKKVLEDNPWAKL 357 Query: 445 VALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAK 504 + G + ++ V + V + V+G + +EA D + VGD V+AK Sbjct: 358 --NLRVGQDIEVRIEEVTKEEVKVSF-ESVDGIIPKNEAHNDPKVNIDEYYQVGDTVKAK 414 Query: 505 FTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAF----KAAKGE 557 +++N + LSV+ E+ + + + + + K K + Sbjct: 415 VIEFNKQNWVLKLSVKRLLNLQERQEFEKYM-GDADEAESLTLGDIYTNLGKDKKKK 470 Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats. Identities = 50/265 (18%), Positives = 109/265 (41%), Gaps = 16/265 (6%) Query: 16 IETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ---GELEIQVGDEVDVAL 72 G+++ GVV + + V + Q + + E +++G +V V + Sbjct: 190 ETITTGAVLEGVVESFETHAAFVRF-EHVSGMLRISQVSHHRIDKIEDVLEIGQKVQVKV 248 Query: 73 DAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFL 131 E + + A + + KA++ ETV G + K+ G VEL+ ++ L Sbjct: 249 IKKEGNRLDLSMK---ALQPTPYEAYLKAHKVGETVKGKVVSKLPFGILVELDRDVKGLL 305 Query: 132 PGSLVDVRPVRDTLHLEG--KELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENL 189 S P + E+E ++ D K+ + +S++ + ++ + NL Sbjct: 306 HKSEYSWNPQSNFDAYIKIDDEIEAVILSKDAKKERISLSKKVLEDNPWAKL------NL 359 Query: 190 QEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFD 249 + G +++ ++ +T V VDG++ + + E VGD + KV++F+ Sbjct: 360 RVGQDIEVRIEEVTKEEVKVSFESVDGIIPKNEAHNDPKVNIDEYYQVGDTVKAKVIEFN 419 Query: 250 RERTRVSLGLKQLGEDPWVAIAKRY 274 ++ + L +K+L ++Y Sbjct: 420 KQNWVLKLSVKRLLNLQERQEFEKY 444 Score = 43.4 bits (101), Expect = 0.021, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 32/98 (32%), Gaps = 4/98 (4%) Query: 8 LFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA---QGELEIQV 64 L + ++ R G + + + K+ V V + IP + N + QV Sbjct: 349 LEDNPWAKLNLRVGQDIEVRIEEVTKEEVKVSF-ESVDGIIPKNEAHNDPKVNIDEYYQV 407 Query: 65 GDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAY 102 GD V + LS ++ + EK Sbjct: 408 GDTVKAKVIEFNKQNWVLKLSVKRLLNLQERQEFEKYM 445 >UniRef50_A5V0B5 RNA binding S1 domain protein n=3 Tax=Chloroflexaceae RepID=A5V0B5_ROSS1 Length = 514 Score = 251 bits (640), Expect = 8e-65, Method: Composition-based stats. Identities = 86/276 (31%), Positives = 136/276 (49%), Gaps = 18/276 (6%) Query: 261 QLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSK 320 K G +L GRVT++ YG FV+I G +GLVH+SEM T + PS Sbjct: 126 AEETPGRPRRVKDLAPGMELEGRVTSIALYGIFVDIGVGRDGLVHISEMSDT-RIESPSD 184 Query: 321 VVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAE-------------THNKGDRV 367 +V +GD V+V V ++ + RRISL ++ + + + GD V Sbjct: 185 LVKIGDTVKVRVKSVEPDGRRISLTMRTKERSAEPRSGRGKKKPEVDYEKLAALRVGDNV 244 Query: 368 EGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERE 427 EG + + FG+F+ + G DGLVH+S+++ + A + G VL+VDA Sbjct: 245 EGTVTGMAPFGVFVDIGVGKDGLVHVSELAEGRVEK-AEDVVQVGQTYTFKVLEVDAAGA 303 Query: 428 RISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDR 487 RISL +++ +KG I+ G ++ + GA V++ G +G + SE S Sbjct: 304 RISLSLRRAQRGQKL---QQLEKGQILEGTISGLAPFGAFVDIGVGRDGLVHISELSNTH 360 Query: 488 VEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKD 523 V V+ VGD V+ + VD +++ ISLS+R +D Sbjct: 361 VARVEDVVKVGDRVQVRVLDVDPQSKRISLSLRLED 396 Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 87/275 (31%), Positives = 140/275 (50%), Gaps = 19/275 (6%) Query: 174 IESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPS 232 +E + R + +++L GME++G V ++ YG FVD+G G DGL+HI++M+ R++ PS Sbjct: 124 APAEETPGRPRRVKDLAPGMELEGRVTSIALYGIFVDIGVGRDGLVHISEMSDTRIESPS 183 Query: 233 EIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYP-------------EGTK 279 ++V +GD + V+V + + R+SL ++ + G Sbjct: 184 DLVKIGDTVKVRVKSVEPDGRRISLTMRTKERSAEPRSGRGKKKPEVDYEKLAALRVGDN 243 Query: 280 LTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEER 339 + G VT + +G FV+I G +GLVHVSE+ + VV VG VL++D Sbjct: 244 VEGTVTGMAPFGVFVDIGVGKDGLVHVSELAEG-RVEKAEDVVQVGQTYTFKVLEVDAAG 302 Query: 340 RRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWN 399 RISL L++ + + KG +EG I + FG F+ + G DGLVH+S++S Sbjct: 303 ARISLSLRRAQRGQKL---QQLEKGQILEGTISGLAPFGAFVDIGVGRDGLVHISELSNT 359 Query: 400 VAGEEAVREYKKGDEIAAVVLQVDAERERISLGVK 434 K GD + VL VD + +RISL ++ Sbjct: 360 HVA-RVEDVVKVGDRVQVRVLDVDPQSKRISLSLR 393 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 74/276 (26%), Positives = 126/276 (45%), Gaps = 17/276 (6%) Query: 85 SREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRPVRD 143 + A+ K + G + G V++ G + S + + Sbjct: 122 YQAPAEETPGRPRRVKDLAPGMELEGRVTSIALYGIFVDIGVGRDGLVHISEMSDTRIES 181 Query: 144 TLHLE--GKELEFKVIKLDQKRNNVVVSRRAVIE---------SENSAERDQLLENLQEG 192 L G ++ +V ++ + ++ R + + L L+ G Sbjct: 182 PSDLVKIGDTVKVRVKSVEPDGRRISLTMRTKERSAEPRSGRGKKKPEVDYEKLAALRVG 241 Query: 193 MEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRE 251 V+G V + +G FVD+G G DGL+H++++A RV+ ++V VG T KVL+ D Sbjct: 242 DNVEGTVTGMAPFGVFVDIGVGKDGLVHVSELAEGRVEKAEDVVQVGQTYTFKVLEVDAA 301 Query: 252 RTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDW 311 R+SL L++ ++ +G L G ++ L +G FV+I G +GLVH+SE+ Sbjct: 302 GARISLSLRRAQRGQK---LQQLEKGQILEGTISGLAPFGAFVDIGVGRDGLVHISELSN 358 Query: 312 TNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLK 347 T+ VV VGD V+V VLD+D + +RISL L+ Sbjct: 359 TH-VARVEDVVKVGDRVQVRVLDVDPQSKRISLSLR 393 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 65/266 (24%), Positives = 117/266 (43%), Gaps = 26/266 (9%) Query: 14 KEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE---LEIQVGDEVDV 70 + + PG + G V +I + VD G+ + + + + + E +++GD V V Sbjct: 135 RVKDLAPGMELEGRVTSIALYGIFVDIGVGRDGLVHISEMSDTRIESPSDLVKIGDTVKV 194 Query: 71 ALDAVEDGFGETLLSREKAKRHEAWI------------TLEKAYEDAETVTGVINGKVKG 118 + +VE L+ +R A + V G + G Sbjct: 195 RVKSVEPDGRRISLTMRTKERSAEPRSGRGKKKPEVDYEKLAALRVGDNVEGTVTGMAPF 254 Query: 119 GFTVELN-GIRAFLPGSLVDVRPVRDTLHLE--GKELEFKVIKLDQKRNNVVVSRRAVIE 175 G V++ G + S + V + G+ FKV+++D + +S R Sbjct: 255 GVFVDIGVGKDGLVHVSELAEGRVEKAEDVVQVGQTYTFKVLEVDAAGARISLSLRRA-- 312 Query: 176 SENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEI 234 +R Q L+ L++G ++G + L +GAFVD+G G DGL+HI++++ V ++ Sbjct: 313 -----QRGQKLQQLEKGQILEGTISGLAPFGAFVDIGVGRDGLVHISELSNTHVARVEDV 367 Query: 235 VNVGDEITVKVLKFDRERTRVSLGLK 260 V VGD + V+VL D + R+SL L+ Sbjct: 368 VKVGDRVQVRVLDVDPQSKRISLSLR 393 Score = 174 bits (441), Expect = 9e-42, Method: Composition-based stats. Identities = 54/202 (26%), Positives = 81/202 (40%), Gaps = 14/202 (6%) Query: 360 THNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVV 419 G +EG++ SI +GIF+ + G DGLVH+S++S E K GD + V Sbjct: 138 DLAPGMELEGRVTSIALYGIFVDIGVGRDGLVHISEMSDTRI-ESPSDLVKIGDTVKVRV 196 Query: 420 LQVDAERERISLGVKQLA-------------EDPFNNWVALNKKGAIVTGKVTAVDAKGA 466 V+ + RISL ++ + +A + G V G VT + G Sbjct: 197 KSVEPDGRRISLTMRTKERSAEPRSGRGKKKPEVDYEKLAALRVGDNVEGTVTGMAPFGV 256 Query: 467 TVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEAD 526 V++ G +G + SE + RVE A V+ VG K VD ISLS+R Sbjct: 257 FVDIGVGKDGLVHVSELAEGRVEKAEDVVQVGQTYTFKVLEVDAAGARISLSLRRAQRGQ 316 Query: 527 EKDAIATVNKQEDANFSNNAMA 548 + + E Sbjct: 317 KLQQLEKGQILEGTISGLAPFG 338 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 62/167 (37%), Gaps = 10/167 (5%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQGELEIQVGDE 67 + K R G V G V + V VD G+ + + + + E +QVG Sbjct: 231 DYEKLAALRVGDNVEGTVTGMAPFGVFVDIGVGKDGLVHVSELAEGRVEKAEDVVQVGQT 290 Query: 68 VDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-G 126 + V+ LS +A+R + L E + + G I+G G V++ G Sbjct: 291 YTFKVLEVDAAGARISLSLRRAQRGQKLQQL----EKGQILEGTISGLAPFGAFVDIGVG 346 Query: 127 IRAFLPGSLVDVRPVRDTLH--LEGKELEFKVIKLDQKRNNVVVSRR 171 + S + V G ++ +V+ +D + + +S R Sbjct: 347 RDGLVHISELSNTHVARVEDVVKVGDRVQVRVLDVDPQSKRISLSLR 393 >UniRef50_C9XMD9 Putative 30S ribosomal protein S1 n=7 Tax=Clostridium RepID=C9XMD9_CLODC Length = 424 Score = 251 bits (640), Expect = 8e-65, Method: Composition-based stats. Identities = 105/404 (25%), Positives = 187/404 (46%), Gaps = 40/404 (9%) Query: 1 MTES--FAQLFEESLKEI-ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQF---K 54 M +L ++ + + + G + G + A+ D V + + IP + K Sbjct: 4 MENDLTMQELLDQQEQVFSKVKVGELTTGKITAVRNDEVQLGLDYGFDGIIPISELNIEK 63 Query: 55 NAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVING 114 N E +GDE+ + V G LS+ + + + L+KAY++ +T + Sbjct: 64 NQYIEDIYHIGDEITAVITKVSQKDGTITLSKLQLDKRNDFAELQKAYDEHRIITVNVEK 123 Query: 115 KVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVI 174 + G N F+P S +D + + DT G LE + +LD ++N +V S R V+ Sbjct: 124 NIDKGVFANYNTYTFFIPISQLDTKFITDTSKFVGLNLEVYIKELDVRKNRLVASHRDVL 183 Query: 175 ESENSAERDQ---------------------------------LLENLQEGMEVKGIVKN 201 + + ER++ L +L+ G + G V Sbjct: 184 QERINKEREERRAQIKAEKEAERARIKQEREEEKARIKAAKEDLFNSLEVGQKRDGKVTK 243 Query: 202 LTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQ 261 + YGAFVD+GG++GL HI ++AW RV+ ++V+ G E+ V VL ++E +++L LK Sbjct: 244 IMPYGAFVDIGGIEGLAHINNLAWTRVESVEDVVSEGQEVEVYVLDVNKETKKIALALKD 303 Query: 262 LGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKV 321 + DPW IAK + +V + + G FV+I+EGV+ + +SE+ T + + V Sbjct: 304 INNDPWDLIAKEVQIDDVVNAKVLRIIEKGAFVQIKEGVDAYLPISELSDT-RVAKVTNV 362 Query: 322 VNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGD 365 VN+GD V+V +LD + +R+ + +K+ P + E + Sbjct: 363 VNIGDEVKVKILDFKPKTKRMLVSIKEATREPEEDITEYLEVEE 406 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 93/421 (22%), Positives = 181/421 (42%), Gaps = 49/421 (11%) Query: 176 SENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEI 234 E +++Q+ ++ G G + + + + L G DG++ I+++ ++ ++ +I Sbjct: 11 QELLDQQEQVFSKVKVGELTTGKITAVRNDEVQLGLDYGFDGIIPISELNIEKNQYIEDI 70 Query: 235 VNVGDEITVKVLKFDRERTRVSLGLKQLGEDP-WVAIAKRYPEGTKLTGRVTNLTDYGCF 293 ++GDEIT + K ++ ++L QL + + + K Y E +T V D G F Sbjct: 71 YHIGDEITAVITKVSQKDGTITLSKLQLDKRNDFAELQKAYDEHRIITVNVEKNIDKGVF 130 Query: 294 VEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN- 352 + +S++ T SK V G +EV + ++D + R+ + Sbjct: 131 AN-YNTYTFFIPISQL-DTKFITDTSKFV--GLNLEVYIKELDVRKNRLVASHRDVLQER 186 Query: 353 ------------------------------------PWQQFAETHNKGDRVEGKIKSITD 376 + + G + +GK+ I Sbjct: 187 INKEREERRAQIKAEKEAERARIKQEREEEKARIKAAKEDLFNSLEVGQKRDGKVTKIMP 246 Query: 377 FGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQL 436 +G F+ + GGI+GL H+++++W E +G E+ VL V+ E ++I+L +K + Sbjct: 247 YGAFVDI-GGIEGLAHINNLAWTRV-ESVEDVVSEGQEVEVYVLDVNKETKKIALALKDI 304 Query: 437 AEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLS 496 DP++ + +V KV + KGA V++ +GV+ YL SE S RV T V++ Sbjct: 305 NNDPWDLIAKEVQIDDVVNAKVLRIIEKGAFVQIKEGVDAYLPISELSDTRVAKVTNVVN 364 Query: 497 VGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAAKG 556 +GDEV+ K K + + +S++ E+D + + S ++ E FK Sbjct: 365 IGDEVKVKILDFKPKTKRMLVSIKEATREPEEDITEYL----EVEESLGSIGELFKDKFK 420 Query: 557 E 557 + Sbjct: 421 D 421 Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 62/186 (33%), Gaps = 8/186 (4%) Query: 15 EIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE---LEIQVGDEVDVA 71 G G V I VD G E + E + G EV+V Sbjct: 228 FNSLEVGQKRDGKVTKIMPYGAFVDIGG-IEGLAHINNLAWTRVESVEDVVSEGQEVEVY 286 Query: 72 LDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL-NGIRAF 130 + V + L+ + W + K + + V + ++ G V++ G+ A+ Sbjct: 287 VLDVNKETKKIALALKDINNDP-WDLIAKEVQIDDVVNAKVLRIIEKGAFVQIKEGVDAY 345 Query: 131 LPGSLVDVRPVRDTLHLE--GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLEN 188 LP S + V ++ G E++ K++ K ++VS + + L Sbjct: 346 LPISELSDTRVAKVTNVVNIGDEVKVKILDFKPKTKRMLVSIKEATREPEEDITEYLEVE 405 Query: 189 LQEGME 194 G Sbjct: 406 ESLGSI 411 >UniRef50_Q7X2Y7 Putative 30S ribosomal protein S1 (Fragment) n=1 Tax=uncultured Acidobacteria bacterium RepID=Q7X2Y7_9BACT Length = 318 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 97/241 (40%), Positives = 143/241 (59%), Gaps = 1/241 (0%) Query: 310 DWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEG 369 W+ + HPSK+VN GD VEV VL +D + RRISLG+KQ + NPWQ E + G RV G Sbjct: 1 SWSKRVKHPSKLVNPGDTVEVEVLSVDPKARRISLGMKQIQDNPWQTLHERYQVGTRVHG 60 Query: 370 KIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERI 429 +++++TDFG FI ++ G+DGLVH+SDISW+ + KKG EI AV+ +DAE R+ Sbjct: 61 RVRNLTDFGAFIEIEDGVDGLVHVSDISWSRRIKHPSEVLKKGQEIDAVITSIDAENRRL 120 Query: 430 SLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVE 489 SL +K L + ++ ++ +K G +V GK+ GA VEL D +EG SE S +RVE Sbjct: 121 SLSIKDLEPNAWDRFLTEHKPGDVVRGKIARFANFGAFVELDDNLEGLCHISELSDERVE 180 Query: 490 DATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAE 549 V+ +G E+E K +D +++ I LS R+ + DE V + + ++ E Sbjct: 181 KPEDVVQLGQEMEFKILRIDVESKKIGLSARSVGKDDEPIVDTKVYSSQAGS-GMASLGE 239 Query: 550 A 550 Sbjct: 240 L 240 Score = 227 bits (580), Expect = 7e-58, Method: Composition-based stats. Identities = 89/209 (42%), Positives = 137/209 (65%), Gaps = 1/209 (0%) Query: 226 KRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVT 285 KRVKHPS++VN GD + V+VL D + R+SLG+KQ+ ++PW + +RY GT++ GRV Sbjct: 4 KRVKHPSKLVNPGDTVEVEVLSVDPKARRISLGMKQIQDNPWQTLHERYQVGTRVHGRVR 63 Query: 286 NLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLG 345 NLTD+G F+EIE+GV+GLVHVS++ W+ + HPS+V+ G ++ ++ ID E RR+SL Sbjct: 64 NLTDFGAFIEIEDGVDGLVHVSDISWSRRIKHPSEVLKKGQEIDAVITSIDAENRRLSLS 123 Query: 346 LKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEA 405 +K + N W +F H GD V GKI +FG F+ LD ++GL H+S++S E+ Sbjct: 124 IKDLEPNAWDRFLTEHKPGDVVRGKIARFANFGAFVELDDNLEGLCHISELSDERV-EKP 182 Query: 406 VREYKKGDEIAAVVLQVDAERERISLGVK 434 + G E+ +L++D E ++I L + Sbjct: 183 EDVVQLGQEMEFKILRIDVESKKIGLSAR 211 Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats. Identities = 48/224 (21%), Positives = 106/224 (47%), Gaps = 10/224 (4%) Query: 56 AQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGK 115 + GD V+V + +V+ L ++ + W TL + Y+ V G + Sbjct: 7 KHPSKLVNPGDTVEVEVLSVDPKARRISLGMKQI-QDNPWQTLHERYQVGTRVHGRVRNL 65 Query: 116 VKGGFTVEL-NGIRAFLPGSLVDV-RPVRDTLH--LEGKELEFKVIKLDQKRNNVVVSRR 171 G +E+ +G+ + S + R ++ +G+E++ + +D + + +S + Sbjct: 66 TDFGAFIEIEDGVDGLVHVSDISWSRRIKHPSEVLKKGQEIDAVITSIDAENRRLSLSIK 125 Query: 172 AVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKH 230 + D+ L + G V+G + ++GAFV+L ++GL HI++++ +RV+ Sbjct: 126 DL----EPNAWDRFLTEHKPGDVVRGKIARFANFGAFVELDDNLEGLCHISELSDERVEK 181 Query: 231 PSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRY 274 P ++V +G E+ K+L+ D E ++ L + +G+D + + Sbjct: 182 PEDVVQLGQEMEFKILRIDVESKKIGLSARSVGKDDEPIVDTKV 225 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 29/178 (16%), Positives = 67/178 (37%), Gaps = 8/178 (4%) Query: 18 TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA----QGELEIQVGDEVDVALD 73 + G+ V G V + ++ + + + ++ G E+D + Sbjct: 52 YQVGTRVHGRVRNLTDFGAFIEIEDGVDGLVHVSDISWSRRIKHPSEVLKKGQEIDAVIT 111 Query: 74 AVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL-NGIRAFLP 132 +++ LS + AW ++ + V G I G VEL + + Sbjct: 112 SIDAENRRLSLSIKDL-EPNAWDRFLTEHKPGDVVRGKIARFANFGAFVELDDNLEGLCH 170 Query: 133 GSLVDVRPVRDTLHLE--GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLEN 188 S + V + G+E+EFK++++D + + +S R+V + + ++ + Sbjct: 171 ISELSDERVEKPEDVVQLGQEMEFKILRIDVESKKIGLSARSVGKDDEPIVDTKVYSS 228 Score = 63.4 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 31/80 (38%), Gaps = 3/80 (3%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ---GELEIQVGDEVDVALD 73 E +PG +VRG + V+ E + + + E +Q+G E++ + Sbjct: 138 EHKPGDVVRGKIARFANFGAFVELDDNLEGLCHISELSDERVEKPEDVVQLGQEMEFKIL 197 Query: 74 AVEDGFGETLLSREKAKRHE 93 ++ + LS + + Sbjct: 198 RIDVESKKIGLSARSVGKDD 217 >UniRef50_C6P7Z4 RNA binding S1 domain protein n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6P7Z4_CLOTS Length = 362 Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 109/365 (29%), Positives = 209/365 (57%), Gaps = 16/365 (4%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK---NAQG 58 + F + +L G IV+G ++ I D ++ D K+++ +P +Q N Sbjct: 1 MDDFMDEYSFNL----IHAGDIVKGKIIKILSDGIIADISYKADAYVPKDQLSLDPNLDI 56 Query: 59 ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 VGDE+D+ + ED G+ L S+ KA A L+ AY++ ++G I +KG Sbjct: 57 NKFFNVGDEIDLYIVKREDENGDVLASKIKADTELAKEKLDTAYKNGNILSGKIIEIIKG 116 Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 G ++ G++AF+P S +D+ V + G+ ++ K+I + ++ S++ V+E E Sbjct: 117 GVLADILGVKAFIPASQLDIHYVNNLNDYLGENVKVKIIDYIPNK-KLIASQKVVLEEEK 175 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVG 238 ++++LL+ LQEG ++G+VK++T +GAF+D+GG+DGL+ +++++W R K+ ++I+++G Sbjct: 176 LKKKEELLKTLQEGQVIQGVVKSITKFGAFIDIGGIDGLIPLSEISWVRNKNINDILHIG 235 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE 298 +++ V + D+E +V+L L++L DPW I+ ++ G + G++ N+T +G FV+I + Sbjct: 236 EKVDAYVERIDKE--KVTLSLRKLIPDPWTTISAKFKVGDVILGKIVNITTFGIFVDISD 293 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFA 358 GVEGLVH S++ + K +G+ + V +L+ID +++SL ++ Sbjct: 294 GVEGLVHKSDL------LKNIKEYRIGENISVEILNIDTNNKKMSLREIDKNNESYELER 347 Query: 359 ETHNK 363 E N Sbjct: 348 EELNV 352 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 87/357 (24%), Positives = 169/357 (47%), Gaps = 20/357 (5%) Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGD 239 + + G VKG + + G D+ D + ++ ++ NVGD Sbjct: 5 MDEYSFNLIHAGDIVKGKIIKILSDGIIADISYKADAYVPKDQLSLDPNLDINKFFNVGD 64 Query: 240 EITVKVLKFDRERTRVSLG-LKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE 298 EI + ++K + E V +K E + Y G L+G++ + G +I Sbjct: 65 EIDLYIVKREDENGDVLASKIKADTELAKEKLDTAYKNGNILSGKIIEIIKGGVLADIL- 123 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRI---SLGLKQCKANPWQ 355 GV+ + S++ + + + + G+ V+V ++D ++ I + L++ K + Sbjct: 124 GVKAFIPASQL-DIHYVNNLNDYL--GENVKVKIIDYIPNKKLIASQKVVLEEEKLKKKE 180 Query: 356 QFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEI 415 + +T +G ++G +KSIT FG FI + GGIDGL+ LS+ISW V + G+++ Sbjct: 181 ELLKTLQEGQVIQGVVKSITKFGAFIDI-GGIDGLIPLSEISW-VRNKNINDILHIGEKV 238 Query: 416 AAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVE 475 A V ++D E +++L +++L DP+ A K G ++ GK+ + G V+++DGVE Sbjct: 239 DAYVERIDKE--KVTLSLRKLIPDPWTTISAKFKVGDVILGKIVNITTFGIFVDISDGVE 296 Query: 476 GYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIA 532 G + S+ ++ +G+ + + +D N+ +SL R D+ +E + Sbjct: 297 GLVHKSDLLKN-----IKEYRIGENISVEILNIDTNNKKMSL--REIDKNNESYELE 346 Score = 180 bits (458), Expect = 9e-44, Method: Composition-based stats. Identities = 79/349 (22%), Positives = 167/349 (47%), Gaps = 23/349 (6%) Query: 90 KRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRPVRDTLHL- 147 + V G I + G +++ A++P + + P D Sbjct: 1 MDDFMDEYSFNLIHAGDIVKGKIIKILSDGIIADISYKADAYVPKDQLSLDPNLDINKFF 60 Query: 148 -EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYG 206 G E++ ++K + + +V+ S+ + D +N G + G + + G Sbjct: 61 NVGDEIDLYIVKREDENGDVLASKIKADTELAKEKLDTAYKN---GNILSGKIIEIIKGG 117 Query: 207 AFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDP 266 D+ GV + + + V + ++ + G+ + VK++ + + ++ K + E+ Sbjct: 118 VLADILGVKAFIPASQLDIHYVNNLNDYL--GENVKVKIIDYIPNKKLIA-SQKVVLEEE 174 Query: 267 WVAIAKRY----PEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVV 322 + + EG + G V ++T +G F++I G++GL+ +SE+ W +N + + ++ Sbjct: 175 KLKKKEELLKTLQEGQVIQGVVKSITKFGAFIDIG-GIDGLIPLSEISWV-RNKNINDIL 232 Query: 323 NVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIG 382 ++G+ V+ V ID+E +++L L++ +PW + GD + GKI +IT FGIF+ Sbjct: 233 HIGEKVDAYVERIDKE--KVTLSLRKLIPDPWTTISAKFKVGDVILGKIVNITTFGIFVD 290 Query: 383 LDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISL 431 + G++GLVH SD+ N+ +EY+ G+ I+ +L +D +++SL Sbjct: 291 ISDGVEGLVHKSDLLKNI------KEYRIGENISVEILNIDTNNKKMSL 333 Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats. Identities = 43/267 (16%), Positives = 108/267 (40%), Gaps = 14/267 (5%) Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDID 336 G + G++ + G +I + V ++ N+ +K NVGD +++ ++ + Sbjct: 16 GDIVKGKIIKILSDGIIADISYKADAYVPKDQLSLD-PNLDINKFFNVGDEIDLYIVKRE 74 Query: 337 EERRRISLG-LKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSD 395 +E + +K ++ + G+ + GKI I G+ + G+ + S Sbjct: 75 DENGDVLASKIKADTELAKEKLDTAYKNGNILSGKIIEIIKGGVLADIL-GVKAFIPASQ 133 Query: 396 ISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVK----QLAEDPFNNWVALNKKG 451 + + G+ + ++ +++ K + + ++G Sbjct: 134 LDIHYVN-NLNDYL--GENVKVKIIDYIP-NKKLIASQKVVLEEEKLKKKEELLKTLQEG 189 Query: 452 AIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRK 511 ++ G V ++ GA +++ G++G + SE S R ++ +L +G++V+A +D++ Sbjct: 190 QVIQGVVKSITKFGAFIDIG-GIDGLIPLSEISWVRNKNINDILHIGEKVDAYVERIDKE 248 Query: 512 NRAISLSVRAKDEADEKDAIATVNKQE 538 ++LS+R A + Sbjct: 249 --KVTLSLRKLIPDPWTTISAKFKVGD 273 Score = 50.3 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 46/118 (38%), Gaps = 2/118 (1%) Query: 436 LAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVL 495 + + L G IV GK+ + + G +++ + Y+ + S D D Sbjct: 1 MDDFMDEYSFNLIHAGDIVKGKIIKILSDGIIADISYKADAYVPKDQLSLDPNLDINKFF 60 Query: 496 SVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKA 553 +VGDE++ + +N + S D K+ + T K + N + + E K Sbjct: 61 NVGDEIDLYIVKREDENGDVLASKIKADTELAKEKLDTAYK--NGNILSGKIIEIIKG 116 >UniRef50_Q9LHM6 Pre-rRNA processing protein RRP5 n=6 Tax=rosids RepID=Q9LHM6_ARATH Length = 1765 Score = 247 bits (631), Expect = 9e-64, Method: Composition-based stats. Identities = 99/528 (18%), Positives = 186/528 (35%), Gaps = 29/528 (5%) Query: 13 LKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQF----KNAQGELEIQVGDEV 68 + PG +V V ++ ++ +L D + N + E V Sbjct: 178 MSFDLLIPGMMVNARVQSVLENGILFDFLTYFNGTVDLFHLKNPLSNKSWKDEYNQNKTV 237 Query: 69 DVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIR 128 + + ++ L+ L + + K G +EL Sbjct: 238 NARILFIDPSSRAVGLTLSPHVVCNKAPPLH-VFSGDIFDEAKVVRIDKSGLLLELPSKP 296 Query: 129 AFLPGSLVDVRPVR----DTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQ 184 P D + EG + +V+ L Q V + + Sbjct: 297 TPTPAYTYDAAGDEVTKLEKKFKEGNHIRVRVLGLKQMEGLAVGTLK----ESAFEGPVF 352 Query: 185 LLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITV 243 +++ GM K V ++ +GA V GG+ + + M+ V P + VG E+ Sbjct: 353 THSDVKPGMVTKAKVISVDTFGAIVQFSGGLKAMCPLRHMSEFEVTKPRKKFKVGAELVF 412 Query: 244 KVLKFDRERTRVSLGLKQLGEDPWVAIAKRYP---EGTKLTGRVTNLTDYGCFVEIEEGV 300 +VL + R+++ K+ + I Y EG G +T + +GCFV GV Sbjct: 413 RVLGC--KSKRITVTYKKTLVKSKLPILSSYTDATEGLVTHGWITKIEKHGCFVRFYNGV 470 Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAET 360 +G V E+ P V +VG+VV+ V +RI+L ++ Sbjct: 471 QGFVPRFELGLE-PGSDPDSVFHVGEVVKCRVTSAVHGTQRITLSF--MIKPSSVSEDDS 527 Query: 361 HNKGDRVEGKIKSITDFGIFIGLDGG--IDGLVHLSDISWNVAG-EEAVREYKKGDEIAA 417 G V G I +IT + + + + G + ++ + + + + G E+ Sbjct: 528 IKLGSIVSGIIDTITSQAVIVRVKSKSVVKGTISAEHLADHHEQAKLIMSLLRPGYELD- 586 Query: 418 VVLQVDAERERISLGVKQ---LAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGV 474 +L +D E ++L K + + + ++V G V + G V + Sbjct: 587 KLLVLDIEGNNMALSSKYSLIKLAEELPSDFNQLQPNSVVHGYVCNLIENGCFVRFLGRL 646 Query: 475 EGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAK 522 G+ S+A D D + VG V A V+++ I+LS++ Sbjct: 647 TGFAPRSKAIDDPKADVSESFFVGQSVRANIVDVNQEKSRITLSLKQS 694 Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats. Identities = 83/538 (15%), Positives = 184/538 (34%), Gaps = 37/538 (6%) Query: 22 SIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE-----------LEIQVGDEVDV 70 + GVV +++ +++ + A + + VG V Sbjct: 1 MKLLGVVTEVNQKDIVISLPGGLRGLVRASEVSDFTDRGIEDDENELLGDIFSVGQLVPC 60 Query: 71 ALDAVEDGFGETLLSREKAKRHEAWITLE---KAYEDAETVTGVINGKVKGGFTVELN-- 125 + ++D E + + + +++ + + G + Sbjct: 61 IVLELDDDKKEAGKRKIWLSLRLSLLHKGFSFDSFQLGMVFSANVKSIEDHGSILHFGLP 120 Query: 126 GIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVV--SRRAVIESENSAERD 183 I F+ + +++ G+ ++ V K+D+ R V + +V + Sbjct: 121 SITGFI---EISDDGNQESGMKTGQLIQGVVTKIDRDRKIVHLSSDPDSVAKCLTKDLSG 177 Query: 184 QLLENLQEGMEVKGIVKNLTDYGAFVD----LGGVDGLLHITD-MAWKRVKHPSEIVNVG 238 + L GM V V+++ + G D G L H+ + ++ K K + N Sbjct: 178 MSFDLLIPGMMVNARVQSVLENGILFDFLTYFNGTVDLFHLKNPLSNKSWK---DEYNQN 234 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE 298 + ++L D V L L + +V + G +E+ Sbjct: 235 KTVNARILFIDPSSRAVGLTLSPHVVCNKAPPLHVFSGDIFDEAKVVRIDKSGLLLELPS 294 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFA 358 + ++ K G+ + V VL + + LK+ Sbjct: 295 KPTPTPAYTYDAAGDEVTKLEKKFKEGNHIRVRVLGLKQMEGLAVGTLKESAFEGPVFTH 354 Query: 359 ETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAV 418 G + K+ S+ FG + GG+ + L +S + +++K G E+ Sbjct: 355 SDVKPGMVTKAKVISVDTFGAIVQFSGGLKAMCPLRHMSEFEVTK-PRKKFKVGAELVFR 413 Query: 419 VLQVDAERERISLGVKQ---LAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVE 475 VL + +RI++ K+ ++ P + +G + G +T ++ G V +GV+ Sbjct: 414 VLGC--KSKRITVTYKKTLVKSKLPILSSYTDATEGLVTHGWITKIEKHGCFVRFYNGVQ 471 Query: 476 GYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLS--VRAKDEADEKDAI 531 G++ E + D V VG+ V+ + T + I+LS ++ +++ Sbjct: 472 GFVPRFELGLEPGSDPDSVFHVGEVVKCRVTSAVHGTQRITLSFMIKPSSVSEDDSIK 529 Score = 194 bits (493), Expect = 8e-48, Method: Composition-based stats. Identities = 93/572 (16%), Positives = 195/572 (34%), Gaps = 59/572 (10%) Query: 21 GSIV-RGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQG----ELEIQVGDEVDVALDAV 75 G I VV IDK +L++ K E + + G+ + V + + Sbjct: 272 GDIFDEAKVVRIDKSGLLLELPSKPTPTPAYTYDAAGDEVTKLEKKFKEGNHIRVRVLGL 331 Query: 76 EDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL-NGIRAFLPGS 134 + G + K E + + + G V+ G++A P Sbjct: 332 KQMEG-LAVGTLKESAFEGPVFTHSDVKPGMVTKAKVISVDTFGAIVQFSGGLKAMCPLR 390 Query: 135 LVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEG 192 + V G EL F+V+ KR V + V ++ + EG Sbjct: 391 HMSEFEVTKPRKKFKVGAELVFRVLGCKSKRITVTYKKTLV---KSKLPILSSYTDATEG 447 Query: 193 MEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRE 251 + G + + +G FV GV G + ++ + P + +VG+ + +V Sbjct: 448 LVTHGWITKIEKHGCFVRFYNGVQGFVPRFELGLEPGSDPDSVFHVGEVVKCRVTSAVHG 507 Query: 252 RTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEG--VEGLVHVSEM 309 R++L + + V+ G+ ++G + +T V ++ V+G + + Sbjct: 508 TQRITLSF--MIKPSSVSEDDSIKLGSIVSGIIDTITSQAVIVRVKSKSVVKGTISAEHL 565 Query: 310 DWTNKNIH-PSKVVNVGDVVEVMVLDIDEERRRISLGLKQCK---ANPWQQFAETHNKGD 365 ++ ++ G ++ +L +D E ++L K A Sbjct: 566 ADHHEQAKLIMSLLRPGYELD-KLLVLDIEGNNMALSSKYSLIKLAEELPSDFNQLQPNS 624 Query: 366 RVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAE 425 V G + ++ + G F+ G + G S + + + + G + A ++ V+ E Sbjct: 625 VVHGYVCNLIENGCFVRFLGRLTGFAPRSK-AIDDPKADVSESFFVGQSVRANIVDVNQE 683 Query: 426 RERISLGVKQLAEDPFN---------------------------NWVALNKKGAIVTGKV 458 + RI+L +KQ + + +WV G+++ G + Sbjct: 684 KSRITLSLKQSSCASVDASFVQEYFLMDEKISDLQSSDITKSDCSWVEKFSIGSLIKGTI 743 Query: 459 TAVDAKGATVELAD--GVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAIS 516 + G V + V G++ L G V A + R R + Sbjct: 744 QEQNDLGVVVNFDNINNVLGFIPQHHMG-------GATLVPGSVVNAVVLDISRAERLVD 796 Query: 517 LSVRAKDEADEKDAIATVNKQEDANFSNNAMA 548 LS+R + + ++ +K++ + + Sbjct: 797 LSLRPELLNNLTKEVSNSSKKKRKRGISKELE 828 Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats. Identities = 94/596 (15%), Positives = 205/596 (34%), Gaps = 77/596 (12%) Query: 15 EIETRPGSIVRGVVVAIDKDVVLVDAG--LKSESAIPAEQFKNAQ-GELEIQVGDEVDVA 71 E V VV + + +++ + + + + G V + Sbjct: 824 SKELEVHQRVSAVVEIVKEQHLVLSIPEHGYTIGYASVSDYNTQKLPVKQFSTGQSVVAS 883 Query: 72 LDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFL 131 + AV++ + ++ E + + + G V A Sbjct: 884 VKAVQN-------PLTSGRLLLLLDSVSGTSETSRSKRAKKKSSCEVGSVVHAEVNDA-- 934 Query: 132 PGSLVDVRPVRDTLHLEGKELEFKV------IKLDQKRNNVVVSRRAVIESENSAERDQL 185 G+ + +V + + + + + A+++ + Q Sbjct: 935 -----STSDEPFAKFRVGQSISARVVAKPCHTDIKKTQLWELSVKPAMLKDSSEFNDTQE 989 Query: 186 LENLQ--EGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMA--WKRVKHPSEIVNVGDE 240 E L+ G V G V + ++ + V + I D + ++ +G Sbjct: 990 SEQLEFAAGQCVIGYVYKVDKEWVWLAVSRNVTARIFILDTSCKAHELEEFERRFPIGKA 1049 Query: 241 ITVKVLKFDRERTRVSL----------GL---------KQLGEDPWVAIAKRYPEGTKLT 281 ++ VL +++E+ + L + K P EG L Sbjct: 1050 VSGYVLTYNKEKKTLRLVQRPLLFIHKSIANGGGSKTDKPDSSIPGDDDTLFIHEGDILG 1109 Query: 282 GRVTNLTDY--GCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEER 339 GR++ + G V++ V G VH +E++ + P G V+ VL+I Sbjct: 1110 GRISKILPGVGGLRVQLGPYVFGRVHFTEINDSW-VPDPLDGFREGQFVKCKVLEISSSS 1168 Query: 340 R---RISLGLKQCKAN------------------PWQQFAETHNKGDRVEGKIKSITDFG 378 + +I L L+ + E + V+G +K+ G Sbjct: 1169 KGTWQIELSLRTSLDGMSSADHLSEDLKNNDNVCKRFERIEDLSPDMGVQGYVKNTMSKG 1228 Query: 379 IFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQL-- 436 FI L ++ V LS++ +E +E+ G + VL V+ +RI + +K + Sbjct: 1229 CFIILSRTVEAKVRLSNLCDTFV-KEPEKEFPVGKLVTGRVLNVEPLSKRIEVTLKTVNA 1287 Query: 437 --AEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELAD-GVEGYLRASEASRDRVEDATL 493 + + G +++G++ V+ G +++ G+ G S+ S DR+E+ Sbjct: 1288 GGRPKSESYDLKKLHVGDMISGRIRRVEPFGLFIDIDQTGMVGLCHISQLSDDRMENVQA 1347 Query: 494 VLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAE 549 G+ V AK +D + + ISL +++ + D A +++ + + + + Sbjct: 1348 RYKAGESVRAKILKLDEEKKRISLGMKSSYLMNGDDDKAQPLSEDNTSMECDPIND 1403 Score = 188 bits (477), Expect = 6e-46, Method: Composition-based stats. Identities = 82/559 (14%), Positives = 183/559 (32%), Gaps = 34/559 (6%) Query: 7 QLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKS-ESAIPAEQFKNAQGELEIQVG 65 L + + G + V +I+ ++ GL S I + E ++ G Sbjct: 84 SLLHKGFSFDSFQLGMVFSANVKSIEDHGSILHFGLPSITGFIEISD--DGNQESGMKTG 141 Query: 66 DEVDVALDAVEDGFGETLLSREK-----AKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 + + ++ LS + + V + ++ G Sbjct: 142 QLIQGVVTKIDRDRKIVHLSSDPDSVAKCLTKDLSGMSFDLLIPGMMVNARVQSVLENGI 201 Query: 121 TVE----LNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIES 176 + NG + + K + +++ +D V ++ + Sbjct: 202 LFDFLTYFNGTVDLFHLKNPLSNKSWKDEYNQNKTVNARILFIDPSSRAVGLTLSPHVVC 261 Query: 177 ENSAERDQLLENLQEGMEV-KGIVKNLTDYGAFVDLGGVDGLLHI--TDMAWKRVKHPSE 233 + ++ G + V + G ++L D A V + Sbjct: 262 NKAPPL-----HVFSGDIFDEAKVVRIDKSGLLLELPSKPTPTPAYTYDAAGDEVTKLEK 316 Query: 234 IVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCF 293 G+ I V+VL + LK+ + V G +V ++ +G Sbjct: 317 KFKEGNHIRVRVLGLKQMEGLAVGTLKESAFEGPVFTHSDVKPGMVTKAKVISVDTFGAI 376 Query: 294 VEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN- 352 V+ G++ + + M + P K VG + VL + +RI++ K+ Sbjct: 377 VQFSGGLKAMCPLRHMS-EFEVTKPRKKFKVGAELVFRVLGC--KSKRITVTYKKTLVKS 433 Query: 353 --PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYK 410 P +G G I I G F+ G+ G V ++ G + + Sbjct: 434 KLPILSSYTDATEGLVTHGWITKIEKHGCFVRFYNGVQGFVPRFELGLE-PGSDPDSVFH 492 Query: 411 KGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVEL 470 G+ + V +RI+L + + + K G+IV+G + + ++ V + Sbjct: 493 VGEVVKCRVTSAVHGTQRITLS--FMIKPSSVSEDDSIKLGSIVSGIIDTITSQAVIVRV 550 Query: 471 ADG--VEGYLRASEASR--DRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEAD 526 V+G + A + ++ + +L G E++ K +D + ++LS + Sbjct: 551 KSKSVVKGTISAEHLADHHEQAKLIMSLLRPGYELD-KLLVLDIEGNNMALSSKYSLIKL 609 Query: 527 EKDAIATVNKQEDANFSNN 545 ++ + N+ + + + Sbjct: 610 AEELPSDFNQLQPNSVVHG 628 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 84/463 (18%), Positives = 163/463 (35%), Gaps = 28/463 (6%) Query: 110 GVINGKVKGGFTVEL-NGIRAFLPGSLVDV---RPVRDTLHL-------EGKELEFKVIK 158 GV+ + + L G+R + S V R + D + G+ + V++ Sbjct: 5 GVVTEVNQKDIVISLPGGLRGLVRASEVSDFTDRGIEDDENELLGDIFSVGQLVPCIVLE 64 Query: 159 LDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVD--LGGVDG 216 LD + + + + + ++ Q GM VK++ D+G+ + L + G Sbjct: 65 LDDDKKEAGKRKIWLSLRLSLLHKGFSFDSFQLGMVFSANVKSIEDHGSILHFGLPSITG 124 Query: 217 LLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLG------LKQLGEDPWVAI 270 + I+D + + G I V K DR+R V L K L +D Sbjct: 125 FIEISD-----DGNQESGMKTGQLIQGVVTKIDRDRKIVHLSSDPDSVAKCLTKDLSGMS 179 Query: 271 AKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEV 330 G + RV ++ + G + G V + + N N V Sbjct: 180 FDLLIPGMMVNARVQSVLENGILFDFLTYFNGTVDLFHLKNPLSNKSWKDEYNQNKTVNA 239 Query: 331 MVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRV-EGKIKSITDFGIFIGLDGGIDG 389 +L ID R + L L + GD E K+ I G+ + L Sbjct: 240 RILFIDPSSRAVGLTLSPHVVCNKAPPLHVFS-GDIFDEAKVVRIDKSGLLLELPSKPTP 298 Query: 390 LVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNK 449 + + + +++K+G+ I VL + +K+ A + + K Sbjct: 299 TPAYTYDAAGDEVTKLEKKFKEGNHIRVRVLGLKQMEGLAVGTLKESAFEGPVFTHSDVK 358 Query: 450 KGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVD 509 G + KV +VD GA V+ + G++ S V VG E+ + G Sbjct: 359 PGMVTKAKVISVDTFGAIVQFSGGLKAMCPLRHMSEFEVTKPRKKFKVGAELVFRVLGC- 417 Query: 510 RKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFK 552 K++ I+++ + + +++ + ++ + + K Sbjct: 418 -KSKRITVTYKKTLVKSKLPILSSYTDATEGLVTHGWITKIEK 459 Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats. Identities = 82/600 (13%), Positives = 191/600 (31%), Gaps = 106/600 (17%) Query: 15 EIETRPGSIVRGVVVAIDKDVVLVDAG--LKSESAIPAEQFKNAQGELEIQVGDEVDVAL 72 + GS+++G + + V+V+ IP G + G V+ + Sbjct: 730 VEKFSIGSLIKGTIQEQNDLGVVVNFDNINNVLGFIPQHHM----GGATLVPGSVVNAVV 785 Query: 73 DAVEDGFGETLLSREK------------AKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 + LS + + + + K E + V+ V+ VK Sbjct: 786 LDISRAERLVDLSLRPELLNNLTKEVSNSSKKKRKRGISKELEVHQRVSAVV-EIVKEQH 844 Query: 121 TV----ELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQ----KRNNVVVSRRA 172 V E + S + + + G+ + V + R +++ + Sbjct: 845 LVLSIPEHGYTIGYASVSDYNTQKLPVKQFSTGQSVVASVKAVQNPLTSGRLLLLLDSVS 904 Query: 173 VIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPS 232 + ++R + + + G V V + + P Sbjct: 905 GTSETSRSKRAKKKSSCEVGSVVHAEVNDASTS-----------------------DEPF 941 Query: 233 EIVNVGDEITVKVLK----FDRERTRVS-LGLKQLGEDPWVAIAK-------RYPEGTKL 280 VG I+ +V+ D ++T++ L +K + G + Sbjct: 942 AKFRVGQSISARVVAKPCHTDIKKTQLWELSVKPAMLKDSSEFNDTQESEQLEFAAGQCV 1001 Query: 281 TGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWT-NKNIHPSKVVNVGDVVEVMVLDIDEER 339 G V + ++ + V + + + ++ + +G V VL ++E+ Sbjct: 1002 IGYVYKVDKEWVWLAVSRNVTARIFILDTSCKAHELEEFERRFPIGKAVSGYVLTYNKEK 1061 Query: 340 RRISL-------------------GLKQCKANPWQQFAETHNKGDRVEGKIKSITD--FG 378 + + L K + P ++GD + G+I I G Sbjct: 1062 KTLRLVQRPLLFIHKSIANGGGSKTDKPDSSIPGDDDTLFIHEGDILGGRISKILPGVGG 1121 Query: 379 IFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERE---RISLGVKQ 435 + + L + G VH ++I+ + + + +++G + VL++ + + +I L ++ Sbjct: 1122 LRVQLGPYVFGRVHFTEINDSWVP-DPLDGFREGQFVKCKVLEISSSSKGTWQIELSLRT 1180 Query: 436 LAEDPFNNWV------------------ALNKKGAIVTGKVTAVDAKGATVELADGVEGY 477 + + V G V +KG + L+ VE Sbjct: 1181 SLDGMSSADHLSEDLKNNDNVCKRFERIEDLSPDMGVQGYVKNTMSKGCFIILSRTVEAK 1240 Query: 478 LRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQ 537 +R S V++ VG V + V+ ++ I ++++ + + + K+ Sbjct: 1241 VRLSNLCDTFVKEPEKEFPVGKLVTGRVLNVEPLSKRIEVTLKTVNAGGRPKSESYDLKK 1300 Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats. Identities = 75/594 (12%), Positives = 172/594 (28%), Gaps = 117/594 (19%) Query: 14 KEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA---QGELEIQVGDEVDV 70 + +P S+V G V + ++ V + P + + VG V Sbjct: 616 DFNQLQPNSVVHGYVCNLIENGCFVRFLGRLTGFAPRSKAIDDPKADVSESFFVGQSVRA 675 Query: 71 ALDAVEDGFGETLLSREKA--------------------------KRHEAWITLEKAYED 104 + V LS +++ ++ + + + Sbjct: 676 NIVDVNQEKSRITLSLKQSSCASVDASFVQEYFLMDEKISDLQSSDITKSDCSWVEKFSI 735 Query: 105 AETVTGVINGKVKGGFTVELNGIR---AFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQ 161 + G I + G V + I F+P + + G + V+ + + Sbjct: 736 GSLIKGTIQEQNDLGVVVNFDNINNVLGFIPQHHMGG-----ATLVPGSVVNAVVLDISR 790 Query: 162 KRNNVVVSRRAVI---------ESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG 212 V +S R + S + + + L+ V +V+ + + + + Sbjct: 791 AERLVDLSLRPELLNNLTKEVSNSSKKKRKRGISKELEVHQRVSAVVEIVKEQHLVLSIP 850 Query: 213 GVDGLLHITDMAWKRVKH-PSEIVNVGDEITVKVLKF-------DRERTRVSLG-LKQLG 263 + ++ + P + + G + V S+ + Sbjct: 851 EHGYTIGYASVSDYNTQKLPVKQFSTGQSVVASVKAVQNPLTSGRLLLLLDSVSGTSETS 910 Query: 264 EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVN 323 G+ + V + + + P Sbjct: 911 RSKRAKKKSSCEVGSVVHAEV-------------------------NDASTSDEPFAKFR 945 Query: 324 VGDVVEVMVL----DIDEERRRIS-LGLKQCK-------ANPWQQFAETHNKGDRVEGKI 371 VG + V+ D ++ ++ L +K + + G V G + Sbjct: 946 VGQSISARVVAKPCHTDIKKTQLWELSVKPAMLKDSSEFNDTQESEQLEFAAGQCVIGYV 1005 Query: 372 KSITDFGIFIGLDGGIDGLVHLSDISWN-VAGEEAVREYKKGDEIAAVVLQVDAERERIS 430 + +++ + + + + D S EE R + G ++ VL + E++ + Sbjct: 1006 YKVDKEWVWLAVSRNVTARIFILDTSCKAHELEEFERRFPIGKAVSGYVLTYNKEKKTLR 1065 Query: 431 L-------------------GVKQLAEDPFNNWVALNKKGAIVTGKVTAVDA--KGATVE 469 L K + P ++ +G I+ G+++ + G V+ Sbjct: 1066 LVQRPLLFIHKSIANGGGSKTDKPDSSIPGDDDTLFIHEGDILGGRISKILPGVGGLRVQ 1125 Query: 470 LADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNR---AISLSVR 520 L V G + +E + V D G V+ K + ++ I LS+R Sbjct: 1126 LGPYVFGRVHFTEINDSWVPDPLDGFREGQFVKCKVLEISSSSKGTWQIELSLR 1179 Score = 72.7 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 24/187 (12%), Positives = 62/187 (33%), Gaps = 10/187 (5%) Query: 12 SLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQGELEIQVGDEV 68 + + P V+G V + E+ + + + E E VG V Sbjct: 1205 FERIEDLSPDMGVQGYVKNTMSKGCFIILSRTVEAKVRLSNLCDTFVKEPEKEFPVGKLV 1264 Query: 69 DVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAET---VTGVINGKVKGGFTVELN 125 + VE ++ + + + ++G I G ++++ Sbjct: 1265 TGRVLNVEPLSKRIEVTLKTVNAGGRPKSESYDLKKLHVGDMISGRIRRVEPFGLFIDID 1324 Query: 126 --GIRAFLPGSLVDVRPVRDTL--HLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 G+ S + + + + G+ + K++KLD+++ + + ++ + Sbjct: 1325 QTGMVGLCHISQLSDDRMENVQARYKAGESVRAKILKLDEEKKRISLGMKSSYLMNGDDD 1384 Query: 182 RDQLLEN 188 + Q L Sbjct: 1385 KAQPLSE 1391 Score = 63.1 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 34/241 (14%), Positives = 83/241 (34%), Gaps = 30/241 (12%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAG-LKSESAIPAEQFKNAQGELE---IQVGD 66 ES + G ++ G + ++ + +D Q + + E + G+ Sbjct: 1294 ESYDLKKLHVGDMISGRIRRVEPFGLFIDIDQTGMVGLCHISQLSDDRMENVQARYKAGE 1353 Query: 67 EVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAET-----------------VT 109 V + +++ L + + + + T V Sbjct: 1354 SVRAKILKLDEEKKRISLGMKSSYLMNGDDDKAQPLSEDNTSMECDPINDPKSEVLAAVD 1413 Query: 110 GVINGKVKGGFTVELNGI--RAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQK---RN 164 + GG ++ L + RA +P VD+ + +T + E K++ ++ + Sbjct: 1414 DFGFQETSGGTSLVLAQVESRASIPPLEVDLDDIEETDFDSSQNQE-KLLGANKDEKSKR 1472 Query: 165 NVVVSRRAVIESENSAERDQLLENLQEG--MEVKGIVKNLTDYGAFVDLGGVDGLLHITD 222 + E + A +LLE+ E + +V++ + +FV + + +L + D Sbjct: 1473 REKQKDKEEREKKIQAAEGRLLEHHAPENADEFEKLVRS-SPNSSFVWIKYMAFMLSLAD 1531 Query: 223 M 223 + Sbjct: 1532 I 1532 >UniRef50_C4R3F9 RNA binding protein with preference for single stranded tracts of U's involved in synthesis of both n=1 Tax=Pichia pastoris GS115 RepID=C4R3F9_PICPG Length = 1694 Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 97/553 (17%), Positives = 191/553 (34%), Gaps = 48/553 (8%) Query: 20 PGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE---IQVGDEVDVALDAVE 76 G IV G V I + ++ + + + V + ++ Sbjct: 777 VGEIVYGYVHTITNAGLFIEFADGLSGFARTKDITDEPSDKLPSLYFKNQSVRARILKLD 836 Query: 77 DGFGETLLSREKAKRHEAWITLE--------KAYEDAETVTGVINGKVKGGFTVEL-NGI 127 D F + L+ + T + + I TVEL Sbjct: 837 DEFRKFRLTLKDIDHQIVAATNPVDKSITNLNEFVPGKITKAKIKSVTPTQLTVELAENQ 896 Query: 128 RAFLPGSLV--DVRPVRDTLHLE-----GKELEFKVIKL-------------DQKRNNVV 167 + S V + ++DT G EL+ KVI D V Sbjct: 897 LGRIDVSQVFDSLLEIKDTKKPLSSFKEGAELKVKVIGYQNKDSSFTSVAFRDWGDILVE 956 Query: 168 VSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAW- 225 +S + E L + G + G V +V + L + D++ Sbjct: 957 LSIKKSELEEEGKVNVLSLTQITPGTKWLGFVTRYARGFWWVSVSPKFRTKLSLMDLSKS 1016 Query: 226 KRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVT 285 V+ + +G I V + + ++ ++ + G KL R+ Sbjct: 1017 GSVEELEKAYPLGSAIEVTAKQIIGNK-----AVEVFSKENRIETINDVKVGDKLPCRII 1071 Query: 286 NLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLG 345 +L+ VE+ + V+ ++E + + + D+ VL +D+ R+I + Sbjct: 1072 SLSHDYVTVELSDKVKAKSFITE-ALDDYSESLESTFSTNDICTATVLSVDDTTRQIFVS 1130 Query: 346 LKQCK-ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEE 404 L+ + + E +GD V G I I++FG+++ L + LV ++DIS + Sbjct: 1131 LRSENAKDKLIESFEDVKRGDIVRGFITRISNFGVYVSLGRTVFALVRVTDISDLFLT-D 1189 Query: 405 AVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFN---NWVALNKKGAIVTGKVTAV 461 + K + ++ E RI + +K+ + K G + G + + Sbjct: 1190 WKKHVKLNQFVTGKIVDA-GEERRILMTLKESQVGQGTGALHQFDDLKVGDVYEGTIKKI 1248 Query: 462 DAKGATVELAD--GVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSV 519 G + L V+G S+ S ++E+ + + GD V+ K ++R + +SL + Sbjct: 1249 MDFGVFITLDGVHSVDGLCHRSQISDSKIENFESLFNQGDRVKVKILDINRNKKQLSLGM 1308 Query: 520 RAKDEADEKDAIA 532 +A A+ D Sbjct: 1309 KASYFANRDDEEE 1321 Score = 174 bits (442), Expect = 7e-42, Method: Composition-based stats. Identities = 81/590 (13%), Positives = 175/590 (29%), Gaps = 53/590 (8%) Query: 12 SLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPA--------------------- 50 S+ PGS+V G V++I K + + +P Sbjct: 113 SMTLKNLIPGSVVLGQVISIQKLGMQLGLPGNIRGYVPITSVSKQITQQLEALEQDSDDE 172 Query: 51 --------EQFKNAQGELEIQVGDEVDVALDAVE--DGFGETLLSREKAKRHEAWITLEK 100 + + Q+G + + + + + Sbjct: 173 DASSSPQLSEKVFPELSKIFQLGQWLRAVVLEESSVPSEHKHKIQLSVEPEKVNAHLEDD 232 Query: 101 AYEDAETVTGVINGKVKGGFTVELN-GIRAFL-PGSLVDVRPVRDTLHLEGKELEFKVIK 158 + +N G V+ I F+ S + +T G L + K Sbjct: 233 DLVPGGVLQVAVNSVQDHGCIVDTGKKIPGFIFSKSFKNSGIDMETDLKPGFVLLATISK 292 Query: 159 LDQKRNNVVVSRRAVIESE-NSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDG 216 + K + + ++ ++ + G+ V + ++T+ G F + G + G Sbjct: 293 SNNKNTITLTLPSMNNKDNGSTLSTATSVDAVLPGVMVNAHILDITEEGIFCRVLGLLPG 352 Query: 217 LLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSL------GLKQLGEDPWVAI 270 + + + V E +G I +V+ SL + +L + Sbjct: 353 RIPLAHLKLFNVPEIRETYKIGSTIKSRVVGVLEYEGSKSLTLSTIPSILELDSTYDESP 412 Query: 271 AKRYPEGTKLT-GRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVG-DVV 328 + +P G ++ ++E+ E G VH+S++ NK + VG Sbjct: 413 LESFPFGFTFESVKIVGKDSNNVYLELNEDTYGQVHLSKL---NKEVSIDSFYKVGSTHH 469 Query: 329 EVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGID 388 + V+ + L + + + G+ V G + + G+ I + + Sbjct: 470 KARVIGYSPVDKVFVLTMDPRQLEAKFLNIQDIPIGEIVTGVVTKVHSHGLNIKIFDQFE 529 Query: 389 GLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVK----QLAEDPFNNW 444 V +S V ++K G ++ VL+ R + + +K + D Sbjct: 530 AQVPYGHMSD-VMLTYPEMKFKIGTKVKGRVLKF--YRGNLCVTLKKSLLRSERDELIFT 586 Query: 445 VALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAK 504 V G + + + G+L +E S V L + + + Sbjct: 587 YEDVVPNKRTFATVEKFFPTGVLMSFFNNISGFLPKTEISEAYVNRPEDHLKLFQTISVR 646 Query: 505 FTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAA 554 +D +S + E+ ++ + E K A Sbjct: 647 IDSIDPATNKFRVSCLLSKDLSEEQEKKISTFIPGSSILEVYIVEKMKDA 696 Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 90/554 (16%), Positives = 190/554 (34%), Gaps = 29/554 (5%) Query: 9 FEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA--QGELEIQVGD 66 L++ + PG +++ V ++ +VD G K I ++ FKN+ E +++ G Sbjct: 225 VNAHLEDDDLVPGGVLQVAVNSVQDHGCIVDTGKKIPGFIFSKSFKNSGIDMETDLKPGF 284 Query: 67 EVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGV-----INGKVKGGFT 121 + + + L+ + TL A + GV I + G Sbjct: 285 VLLATISKSNNK-NTITLTLPSMNNKDNGSTLSTATSVDAVLPGVMVNAHILDITEEGIF 343 Query: 122 VELNG-IRAFLPGSLVDVRPVRDTLH--LEGKELEFKVIKLD--QKRNNVVVSRRAVIES 176 + G + +P + + + V + G ++ +V+ + + ++ +S I Sbjct: 344 CRVLGLLPGRIPLAHLKLFNVPEIRETYKIGSTIKSRVVGVLEYEGSKSLTLSTIPSILE 403 Query: 177 ENSAERDQLLENLQEGMEVK-GIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEI 234 +S + LE+ G + + +++L G +H++ + + Sbjct: 404 LDSTYDESPLESFPFGFTFESVKIVGKDSNNVYLELNEDTYGQVHLSKL--NKEVSIDSF 461 Query: 235 VNVGDE-ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCF 293 VG +V+ + L + + + P G +TG VT + +G Sbjct: 462 YKVGSTHHKARVIGYSPVDKVFVLTMDPRQLEAKFLNIQDIPIGEIVTGVVTKVHSHGLN 521 Query: 294 VEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISL--GLKQCKA 351 ++I + E V M +P +G V+ VL ++L L + + Sbjct: 522 IKIFDQFEAQVPYGHMSD-VMLTYPEMKFKIGTKVKGRVLKFYRGNLCVTLKKSLLRSER 580 Query: 352 NPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKK 411 + E R ++ G+ + I G + ++IS K Sbjct: 581 DELIFTYEDVVPNKRTFATVEKFFPTGVLMSFFNNISGFLPKTEISEAYVN-RPEDHLKL 639 Query: 412 GDEIAAVVLQVDAERERISLGV---KQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATV 468 I+ + +D + + K L+E+ +I+ + V Sbjct: 640 FQTISVRIDSIDPATNKFRVSCLLSKDLSEEQEKKISTFIPGSSILEVYIVEKMKDAMIV 699 Query: 469 ELAD-GVEGYLRASEASRDRVEDATLVLS---VGDEVEAKFTGVDRKNRAISLSVRAKDE 524 E+ D V G ++ + S +L VG +EA F D K+R I+ + + Sbjct: 700 EVKDSNVRGVIQEGQLSDGDQNQNKTLLRTAVVGSSLEALFLHRDPKSRTINFTAKDSLI 759 Query: 525 ADEKDAIATVNKQE 538 K + +E Sbjct: 760 RASKSGQLPASFEE 773 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 93/626 (14%), Positives = 200/626 (31%), Gaps = 89/626 (14%) Query: 7 QLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQGELEIQ 63 QL + L + G IV GVV + + + + E+ +P + E++ + Sbjct: 491 QLEAKFLNIQDIPIGEIVTGVVTKVHSHGLNIKIFDQFEAQVPYGHMSDVMLTYPEMKFK 550 Query: 64 VGDEVDVALDAVEDGFGETLLSREKAKRHEA-WITLEKAYEDAETVTGVINGKVKGGFTV 122 +G +V + G L + + I + + + G + Sbjct: 551 IGTKVKGRVLKFYRGNLCVTLKKSLLRSERDELIFTYEDVVPNKRTFATVEKFFPTGVLM 610 Query: 123 E-LNGIRAFLPGSLVDVRPVRDTLHLEG--KELEFKVIKLDQKRNNVVVSRRAVIESENS 179 N I FLP + + V + + ++ +D N VS ++ + S Sbjct: 611 SFFNNISGFLPKTEISEAYVNRPEDHLKLFQTISVRIDSIDPATNKFRVSC--LLSKDLS 668 Query: 180 AERDQLLENLQEG-MEVKGIVKNLTDYGAFVDL--GGVDGLLHITDMAWKRVKHPSEIVN 236 E+++ + G ++ + V++ V G++ ++ ++ Sbjct: 669 EEQEKKISTFIPGSSILEVYIVEKMKDAMIVEVKDSNVRGVIQEGQLSDGDQNQNKTLLR 728 Query: 237 ---VGDEITVKVLKFDRERTRVSLGLKQLGEDPWV------AIAKRYPEGTKLTGRVTNL 287 VG + L D + ++ K + + G + G V + Sbjct: 729 TAVVGSSLEALFLHRDPKSRTINFTAKDSLIRASKSGQLPASFEELPAVGEIVYGYVHTI 788 Query: 288 TDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLK 347 T+ G F+E +G+ G ++ + PS V +L +D+E R+ L LK Sbjct: 789 TNAGLFIEFADGLSGFARTKDITDEPSDKLPSLYFK-NQSVRARILKLDDEFRKFRLTLK 847 Query: 348 QCKA---------NPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISW 398 + G + KIKS+T + + L G + +S + Sbjct: 848 DIDHQIVAATNPVDKSITNLNEFVPGKITKAKIKSVTPTQLTVELAENQLGRIDVSQVFD 907 Query: 399 N----VAGEEAVREYKKGDEIAAVVLQVDAERER-------------ISLGVKQLAEDPF 441 + ++ + +K+G E+ V+ + + L +K+ + Sbjct: 908 SLLEIKDTKKPLSSFKEGAELKVKVIGYQNKDSSFTSVAFRDWGDILVELSIKKSELEEE 967 Query: 442 NNWV----ALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASR------------ 485 G G VT V ++ L + S+ Sbjct: 968 GKVNVLSLTQITPGTKWLGFVTRYARGFWWVSVSPKFRTKLSLMDLSKSGSVEELEKAYP 1027 Query: 486 ------------------------DRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRA 521 +R+E V VGD++ + + + LS + Sbjct: 1028 LGSAIEVTAKQIIGNKAVEVFSKENRIETINDV-KVGDKLPCRIISLSHDYVTVELSDKV 1086 Query: 522 KDEADEKDAIATVNKQEDANFSNNAM 547 K ++ +A+ ++ ++ FS N + Sbjct: 1087 KAKSFITEALDDYSESLESTFSTNDI 1112 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 102/261 (39%), Gaps = 11/261 (4%) Query: 10 EESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE---IQVGD 66 + + G + ++++ D V V+ K ++ + + E D Sbjct: 1052 NRIETINDVKVGDKLPCRIISLSHDYVTVELSDKVKAKSFITEALDDYSESLESTFSTND 1111 Query: 67 EVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN- 125 + +V+D + +S + I + + + V G I G V L Sbjct: 1112 ICTATVLSVDDTTRQIFVSLRSENAKDKLIESFEDVKRGDIVRGFITRISNFGVYVSLGR 1171 Query: 126 GIRAFLPGSLVDVRPVRDTLHLE--GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERD 183 + A + + + + D + + K+ +D ++ + Sbjct: 1172 TVFALVRVTDISDLFLTDWKKHVKLNQFVTGKI--VDAGEERRILMTLKESQVGQGTGAL 1229 Query: 184 QLLENLQEGMEVKGIVKNLTDYGAFVDLGG---VDGLLHITDMAWKRVKHPSEIVNVGDE 240 ++L+ G +G +K + D+G F+ L G VDGL H + ++ ++++ + N GD Sbjct: 1230 HQFDDLKVGDVYEGTIKKIMDFGVFITLDGVHSVDGLCHRSQISDSKIENFESLFNQGDR 1289 Query: 241 ITVKVLKFDRERTRVSLGLKQ 261 + VK+L +R + ++SLG+K Sbjct: 1290 VKVKILDINRNKKQLSLGMKA 1310 Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats. Identities = 25/192 (13%), Positives = 65/192 (33%), Gaps = 11/192 (5%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQG 58 +E+ ES + + G IVRG + I V V G + + + Sbjct: 1133 SENAKDKLIESF--EDVKRGDIVRGFITRISNFGVYVSLGRTVFALVRVTDISDLFLTDW 1190 Query: 59 ELEIQVGDEVDVALDAVEDGFGET-LLSREKAKRHEAWITLEKAYEDAETVTGVINGKVK 117 + +++ V + + L + + + + + G I + Sbjct: 1191 KKHVKLNQFVTGKIVDAGEERRILMTLKESQVGQGTGALHQFDDLKVGDVYEGTIKKIMD 1250 Query: 118 GGFTVELNG---IRAFLPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRA 172 G + L+G + S + + + L +G ++ K++ +++ + + + +A Sbjct: 1251 FGVFITLDGVHSVDGLCHRSQISDSKIENFESLFNQGDRVKVKILDINRNKKQLSLGMKA 1310 Query: 173 VIESENSAERDQ 184 + E + Sbjct: 1311 SYFANRDDEEEA 1322 >UniRef50_A4S384 Predicted protein n=2 Tax=Ostreococcus RepID=A4S384_OSTLU Length = 1869 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 105/531 (19%), Positives = 194/531 (36%), Gaps = 40/531 (7%) Query: 14 KEIETRPGSIVRGVVVAIDKDVVLVDAG--LKSESAIPAEQF--KNAQGELEIQVGDEVD 69 + + G V V I + V + P + V Sbjct: 955 SLKKLKVGDQVSAEVELIKAEYVALSLPEHNGLIGFAPVHHLNLRYEDASERFTPTQCVK 1014 Query: 70 VALDAV-EDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL-NGI 127 + + E G LL+ K A + V GV++ V L N Sbjct: 1015 AVIAQLPEGEMGRLLLTVPVTKGTTASGRIAA----GTLVKGVVSEVQNLQALVALPNNA 1070 Query: 128 RAFLPGSLVDVRPVRDTLHL-EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLL 186 R L S + G +E V+ L R + ++ + +L Sbjct: 1071 RGRLYISEFSPGEDTPLESISVGSTVEATVMGLAGDRGGL-------LDLSMHRKSAFVL 1123 Query: 187 ENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVK---HPSEIVNVGDEIT 242 E++ G +V V ++TD G V + G+ + + + K + S VG+ ++ Sbjct: 1124 EDVSVGDDVSAYVVSVTDDGIKVTIAPGITSFIPKIETSDKSSELAMKLSSRFTVGERVS 1183 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDY-GCFVEIEEGVE 301 ++ + RV L L+ + + R G K+ G +T + + G V++ Sbjct: 1184 AIIVGVKATKKRVDLSLR----TDGASGSSRVCVGAKVQGIITRVVENVGLMVQLGSHSV 1239 Query: 302 GLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCK--------ANP 353 G VH+++M + P G VV+V VL+ + L ++ + +P Sbjct: 1240 GRVHLTDMADEY-DDDPCAKYEAGQVVQVRVLNA-SSNGELDLSMRASRLSSKRTSPTDP 1297 Query: 354 WQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGD 413 G RV+G +K+ + G FI L GID + LS+++ + + + + G Sbjct: 1298 EITDISNLVPGQRVKGYVKATSKKGCFIALSRGIDAMCKLSNLADSFIAD-PAKTFPPGK 1356 Query: 414 EIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELAD- 472 + ++ DA + R+ L ++ N V+ K G ++ G V V G V L Sbjct: 1357 LVEGRIVSADAAKGRVELAFRETDATQGNADVSTVKVGDVLIGTVRRVQPYGVFVSLDGT 1416 Query: 473 GVEGYLRASEASRDRV-EDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAK 522 + G S + R+ +D + G+ V K ++ + ISL ++A Sbjct: 1417 KLSGLCHISMFADARISDDLASHVRQGERVRTKVLEINTETNKISLGIKAS 1467 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 110/542 (20%), Positives = 188/542 (34%), Gaps = 44/542 (8%) Query: 14 KEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQ----FKNAQGELEIQVGDEVD 69 PG +V + I D V V + + +VG + Sbjct: 295 NVDTLLPGMLVNSRIKQILSDGVSVSFMTYFSGTVDCFHTGALATSKGVSSAFKVGQRMR 354 Query: 70 VALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG-GFTVEL---- 124 + V+ L+ A I L K + +T I G G + + Sbjct: 355 ARIIFVDSASKRVSLTLLPHLLDYASIELPKLGKTFQT--AKIERVDAGQGVALSISDGK 412 Query: 125 NGIRAFLPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 N I + S + V G+ + +VI + ++S A+ Sbjct: 413 NDIAGYAHVSQLSDERVEKVEKKFKIGRSVSVRVIGH----RLLDGVVSVSLKSSVMAQP 468 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEI 241 L+ L GM V G V + YGA V L G+ L ++ + S V G ++ Sbjct: 469 FFSLDELTPGMLVNGEVLAVEHYGAIVKLAEGIKALCPPLHISDIVGRTTSAKVAPGAKL 528 Query: 242 TVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYP---EGTKLTGRVTNLTDYGCFVEIEE 298 +VL DR R ++ K+ + + + G+ G VT + +YG FV + Sbjct: 529 KFRVLNVDRNSRRATVSHKRTLIKSELPVIGQIEDAVPGSITHGVVTGVNEYGVFVSLYG 588 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFA 358 ++GL ++++ ++ PS VG VV V V+ D R+ L L A+ Sbjct: 589 DLKGLAGLNDLGL-LRDQKPSDAFGVGQVVRVQVVSADTS-GRLRLSLASGDADGNSASM 646 Query: 359 ------ETHNKGDRVE-GKIKSITDFGIFIGL-----DGGIDGLVHLSDISWNV-AGEEA 405 + G VE + + + + +G I G+V L+ +S + + Sbjct: 647 IINASADALKPGHVVEKAVVTHVASGTGNVEVVFSMEEGNIPGVVPLAHLSDHPLTAQGL 706 Query: 406 VREYKKGDEIAAVVLQVDAERERISLGVK-----QLAEDPFNNWVALNKKGAIVTGKVTA 460 GDEI +V+ ++ + R + K E GA+ G V + Sbjct: 707 SAVLNPGDEIGPLVV-LEGKSTRAVMSRKLSLVESSREGKLPATAKEATLGAVFPGYVAS 765 Query: 461 VDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRK--NRAISLS 518 A G V + G S+ + D + VG V A VD +SLS Sbjct: 766 ATAAGVFVRFLGRLTGLAPPSQLTDGTTGDVHEMFPVGKTVNALILSVDTSTPTPRLSLS 825 Query: 519 VR 520 ++ Sbjct: 826 LK 827 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 97/551 (17%), Positives = 194/551 (35%), Gaps = 46/551 (8%) Query: 13 LKEIETRPGSIVRGVVVAIDKDVVLVD--AGLKSESAIPAEQFKNAQGELEIQVGDEVDV 70 +PG+ + V VL+D + Q + GDEV Sbjct: 866 ETAKSLKPGTWMDVSVNETKDYGVLMDVPIDSNVVGLVTPHQI---PVDTTFTAGDEVKG 922 Query: 71 ALDAVEDGFGETLLSREKAKRHEAWITLE-----KAYEDAETVTGVINGKVKGGFTV--- 122 + V G + K + + V+ + +K + Sbjct: 923 YVLDVSRREGVVDIGMRDGLGKFKRNKTSSGKSLKKLKVGDQVSAEV-ELIKAEYVALSL 981 Query: 123 -ELNGIRAFLPGSLVDVRPVRDTLHLE-GKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 E NG+ F P +++R + + ++ + +L + ++ V + ++ Sbjct: 982 PEHNGLIGFAPVHHLNLRYEDASERFTPTQCVKAVIAQLPEGEMGRLLLTVPVTKGTTAS 1041 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGD 239 R + G VKG+V + + A V L G L+I++ + P E ++VG Sbjct: 1042 GR------IAAGTLVKGVVSEVQNLQALVALPNNARGRLYISEFSPG-EDTPLESISVGS 1094 Query: 240 EITVKVLKFDRERT-RVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE 298 + V+ +R + L + + + G ++ V ++TD G V I Sbjct: 1095 TVEATVMGLAGDRGGLLDLSM----HRKSAFVLEDVSVGDDVSAYVVSVTDDGIKVTIAP 1150 Query: 299 GVEGLVHVSEMDWTNKNI--HPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQ 356 G+ + E + + S VG+ V +++ + ++R+ L L+ Sbjct: 1151 GITSFIPKIETSDKSSELAMKLSSRFTVGERVSAIIVGVKATKKRVDLSLRT----DGAS 1206 Query: 357 FAETHNKGDRVEGKIKSITDF-GIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEI 415 + G +V+G I + + G+ + L G VHL+D++ ++ +Y+ G + Sbjct: 1207 GSSRVCVGAKVQGIITRVVENVGLMVQLGSHSVGRVHLTDMADEYD-DDPCAKYEAGQVV 1265 Query: 416 AAVVLQVDAERERISLGVKQLAE--------DPFNNWVALNKKGAIVTGKVTAVDAKGAT 467 VL + L ++ DP ++ G V G V A KG Sbjct: 1266 QVRVLNAS-SNGELDLSMRASRLSSKRTSPTDPEITDISNLVPGQRVKGYVKATSKKGCF 1324 Query: 468 VELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADE 527 + L+ G++ + S + + D G VE + D + L+ R D Sbjct: 1325 IALSRGIDAMCKLSNLADSFIADPAKTFPPGKLVEGRIVSADAAKGRVELAFRETDATQG 1384 Query: 528 KDAIATVNKQE 538 ++TV + Sbjct: 1385 NADVSTVKVGD 1395 Score = 194 bits (494), Expect = 6e-48, Method: Composition-based stats. Identities = 102/539 (18%), Positives = 186/539 (34%), Gaps = 40/539 (7%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK------------NAQG 58 E+LK RPG+ + G++ + +++ + + A Sbjct: 106 ETLKYKSLRPGAKLLGIISEVTARGLVMSLPDGLRGTVARAEVAGTSDEDDDDDDAEASL 165 Query: 59 ELEIQVGDEVDVALDAVEDGF---GETLLSREKAKRHEAWITLEKAYEDAETVTGVINGK 115 EL + G + A+ ++E G LS K E +++ + V+ Sbjct: 166 ELLYEPGQVLRCAVVSLEKGKTGGKRIELSLRLEKVCEGLT--KESLTEGSVAPAVVQSV 223 Query: 116 VKGGFTVELN--GIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKL---DQKRNNVVVSR 170 G+ + FLP V +G+ ++ + ++ V + Sbjct: 224 EDHGYILSFGIADTSGFLPKKNVASDLGE---IRKGRIIDVVITGAPKGNKGYFTVTSDQ 280 Query: 171 RAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDM-AWKRV 228 + + S ++ L GM V +K + G V G + A Sbjct: 281 KRIKTSVAHETSATNVDTLLPGMLVNSRIKQILSDGVSVSFMTYFSGTVDCFHTGALATS 340 Query: 229 KHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKL-TGRVTNL 287 K S VG + +++ D RVSL L D A + G T ++ + Sbjct: 341 KGVSSAFKVGQRMRARIIFVDSASKRVSLTLLPHLLD--YASIELPKLGKTFQTAKIERV 398 Query: 288 TDY-GCFVEIEEG---VEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRIS 343 G + I +G + G HVS++ + K +G V V V+ +S Sbjct: 399 DAGQGVALSISDGKNDIAGYAHVSQLSDE-RVEKVEKKFKIGRSVSVRVIGHRLLDGVVS 457 Query: 344 LGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGE 403 + LK + G V G++ ++ +G + L GI L IS + G Sbjct: 458 VSLKSSVMAQPFFSLDELTPGMLVNGEVLAVEHYGAIVKLAEGIKALCPPLHISD-IVGR 516 Query: 404 EAVREYKKGDEIAAVVLQVDAERERISLGVKQL---AEDPFNNWVALNKKGAIVTGKVTA 460 + G ++ VL VD R ++ K+ +E P + G+I G VT Sbjct: 517 TTSAKVAPGAKLKFRVLNVDRNSRRATVSHKRTLIKSELPVIGQIEDAVPGSITHGVVTG 576 Query: 461 VDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSV 519 V+ G V L ++G ++ R + + VG V + D + + LS+ Sbjct: 577 VNEYGVFVSLYGDLKGLAGLNDLGLLRDQKPSDAFGVGQVVRVQVVSADT-SGRLRLSL 634 Score = 167 bits (424), Expect = 9e-40, Method: Composition-based stats. Identities = 90/593 (15%), Positives = 186/593 (31%), Gaps = 84/593 (14%) Query: 21 GSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA---QGELEIQVGDEVDVALDAVED 77 G++ G V + V V + P Q + VG V+ + +V+ Sbjct: 756 GAVFPGYVASATAAGVFVRFLGRLTGLAPPSQLTDGTTGDVHEMFPVGKTVNALILSVDT 815 Query: 78 GFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVD 137 LS + + + G V Sbjct: 816 STPTPRLSLSLKVSATSSPLSDAPLVRSFFQDIEFLDDRDVG-------------AEDVG 862 Query: 138 VRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKG 197 + P G ++ V + + V + + + + + G EVKG Sbjct: 863 ISPETAKSLKPGTWMDVSVNETKDYGVLMDVPIDSNVVGLVTPHQIPVDTTFTAGDEVKG 922 Query: 198 IVKNLTDYGAFVDLG--------------------------------------------- 212 V +++ VD+G Sbjct: 923 YVLDVSRREGVVDIGMRDGLGKFKRNKTSSGKSLKKLKVGDQVSAEVELIKAEYVALSLP 982 Query: 213 ---GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKF-DRERTRVSLGLKQLGEDPWV 268 G+ G + + + + SE + + + + E R+ L + Sbjct: 983 EHNGLIGFAPVHHLNLRY-EDASERFTPTQCVKAVIAQLPEGEMGRLLLT---VPVTKGT 1038 Query: 269 AIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVV 328 + R GT + G V+ + + V + G +++SE P + ++VG V Sbjct: 1039 TASGRIAAGTLVKGVVSEVQNLQALVALPNNARGRLYISEFSPGEDT--PLESISVGSTV 1096 Query: 329 EVMVLDIDEERRRIS-LGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGI 387 E V+ + +R + L + E + GD V + S+TD GI + + GI Sbjct: 1097 EATVMGLAGDRGGLLDLSMH----RKSAFVLEDVSVGDDVSAYVVSVTDDGIKVTIAPGI 1152 Query: 388 DGLVHLSDISWN--VAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWV 445 + + S + + G+ ++A+++ V A ++R+ L ++ + Sbjct: 1153 TSFIPKIETSDKSSELAMKLSSRFTVGERVSAIIVGVKATKKRVDLSLRTDGASGSSRVC 1212 Query: 446 ALNKKGAIVTGKVTAVDAK-GATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAK 504 GA V G +T V G V+L G + ++ + + +D G V+ + Sbjct: 1213 ----VGAKVQGIITRVVENVGLMVQLGSHSVGRVHLTDMADEYDDDPCAKYEAGQVVQVR 1268 Query: 505 FTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAAKGE 557 N + LS+RA + ++ + + +N + + A + Sbjct: 1269 VLNASS-NGELDLSMRASRLSSKRTSPTDPEITDISNLVPGQRVKGYVKATSK 1320 Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats. Identities = 81/476 (17%), Positives = 164/476 (34%), Gaps = 42/476 (8%) Query: 99 EKAYEDAETVTGVINGKVKGGFTVEL-NGIRAFLPGSLVD-----------VRPVRDTLH 146 K+ + G+I+ G + L +G+R + + V + L+ Sbjct: 110 YKSLRPGAKLLGIISEVTARGLVMSLPDGLRGTVARAEVAGTSDEDDDDDDAEASLELLY 169 Query: 147 LEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYG 206 G+ L V+ L++ + R + E+L EG +V+++ D+G Sbjct: 170 EPGQVLRCAVVSLEKGKT--GGKRIELSLRLEKVCEGLTKESLTEGSVAPAVVQSVEDHG 227 Query: 207 AFVDLG--GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLK----------FDRERTR 254 + G G L ++A EI G I V + ++ R Sbjct: 228 YILSFGIADTSGFLPKKNVA----SDLGEI-RKGRIIDVVITGAPKGNKGYFTVTSDQKR 282 Query: 255 VSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNK 314 + + + G + R+ + G V G V Sbjct: 283 IKTS---VAHETSATNVDTLLPGMLVNSRIKQILSDGVSVSFMTYFSGTVDCFHTGALAT 339 Query: 315 NIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRV-EGKIKS 373 + S VG + ++ +D +R+SL L + G KI+ Sbjct: 340 SKGVSSAFKVGQRMRARIIFVDSASKRVSLTLLPHLLDYASIELPKL--GKTFQTAKIER 397 Query: 374 ITDF-GIFIGLDGG---IDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERI 429 + G+ + + G I G H+S +S + +++K G ++ V+ + Sbjct: 398 VDAGQGVALSISDGKNDIAGYAHVSQLSDERVEK-VEKKFKIGRSVSVRVIGHRLLDGVV 456 Query: 430 SLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVE 489 S+ +K + G +V G+V AV+ GA V+LA+G++ S Sbjct: 457 SVSLKSSVMAQPFFSLDELTPGMLVNGEVLAVEHYGAIVKLAEGIKALCPPLHISDIVGR 516 Query: 490 DATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNN 545 + ++ G +++ + VDR +R ++S + E I + + ++ Sbjct: 517 TTSAKVAPGAKLKFRVLNVDRNSRRATVSHKRTLIKSELPVIGQIEDAVPGSITHG 572 Score = 75.4 bits (184), Expect = 6e-12, Method: Composition-based stats. Identities = 27/188 (14%), Positives = 66/188 (35%), Gaps = 9/188 (4%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA---QGELEIQVGDE 67 E PG V+G V A K + ++ ++ G Sbjct: 1298 EITDISNLVPGQRVKGYVKATSKKGCFIALSRGIDAMCKLSNLADSFIADPAKTFPPGKL 1357 Query: 68 VDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNG- 126 V+ + + + G L+ + + + + + + G + G V L+G Sbjct: 1358 VEGRIVSADAAKGRVELAFRETDATQGNADVST-VKVGDVLIGTVRRVQPYGVFVSLDGT 1416 Query: 127 -IRAFLPGSL-VDVRPVRDTLHLE--GKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 + S+ D R D G+ + KV++++ + N + + +A + ++ + Sbjct: 1417 KLSGLCHISMFADARISDDLASHVRQGERVRTKVLEINTETNKISLGIKASLFEDDDGDG 1476 Query: 183 DQLLENLQ 190 D+ + ++ Sbjct: 1477 DEEMADVN 1484 >UniRef50_A6GGH5 Ribosomal protein S1 n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GGH5_9DELT Length = 391 Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats. Identities = 116/374 (31%), Positives = 178/374 (47%), Gaps = 20/374 (5%) Query: 3 ESFAQLFEESLKE-------IETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN 55 + FA LFE+S+ PG V+ VV I + V VD G +SE I + +N Sbjct: 5 DDFAALFEQSVSGGGDRSSGKRLSPGESVQATVVQIGRQTVFVDVGTRSEGEIDVHELQN 64 Query: 56 AQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGK 115 +GEL ++VGD + + D + + LE A E VTG + Sbjct: 65 EKGELTVKVGDRLRAIVQTGGDRPKLVM----RFGGSGGIGDLELALESGAPVTGTVTKA 120 Query: 116 VKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIE 175 VKGG V++ RAF P S V V D EG+ L FKV+++ K +VVVSR+A+++ Sbjct: 121 VKGGLEVQIGKTRAFCPASHVHVAYTPDISIYEGQSLAFKVLEIRDKGRSVVVSRKALLQ 180 Query: 176 SENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIV 235 E + LLE L EG V G V+ + YGAFVDLGGV+GL+HI+++ RV+ ++V Sbjct: 181 EEREQKGKALLEQLAEGQIVTGTVQTIQPYGAFVDLGGVEGLIHISELGHGRVERVEDVV 240 Query: 236 NVGDEITVKVLKFDRERT----RVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYG 291 +VG++I VKVL + R+SL L+Q + A+ E + V + +G Sbjct: 241 SVGEQIRVKVLTIEPGDGKVATRISLSLRQAEQGAGP--AQAGSERKVVDAEVVKVETFG 298 Query: 292 CFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKA 351 FVE G+V E+ P + VG V V+ + D ++ R +++ + Sbjct: 299 VFVETATSG-GIVPTREL-DLPPGGDPRRAYPVGKQVRVVAIGTD-DKGRTRFSMRRVEE 355 Query: 352 NPWQQFAETHNKGD 365 + + Sbjct: 356 TEARANFKQFRAKQ 369 Score = 174 bits (441), Expect = 8e-42, Method: Composition-based stats. Identities = 82/383 (21%), Positives = 141/383 (36%), Gaps = 29/383 (7%) Query: 187 ENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSEIVNVGDEITVKV 245 + L G V+ V + FVD+G +G + + ++ + V VGD + V Sbjct: 25 KRLSPGESVQATVVQIGRQTVFVDVGTRSEGEIDVHELQN---EKGELTVKVGDRLRAIV 81 Query: 246 LKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVH 305 R L ++ G + G +TG VT G V+I Sbjct: 82 Q---TGGDRPKLVMRFGGSGGIGDLELALESGAPVTGTVTKAVKGGLEVQIG-KTRAFCP 137 Query: 306 VSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAE----TH 361 S + + P + G + VL+I ++ R + + K +Q + Sbjct: 138 ASHV---HVAYTPDISIYEGQSLAFKVLEIRDKGRSVVVSRKALLQEEREQKGKALLEQL 194 Query: 362 NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQ 421 +G V G +++I +G F+ L GG++GL+H+S++ E G++I VL Sbjct: 195 AEGQIVTGTVQTIQPYGAFVDL-GGVEGLIHISELGHGRV-ERVEDVVSVGEQIRVKVLT 252 Query: 422 VDAERE----RISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGY 477 ++ RISL ++Q + +K +V +V V+ G VE A G Sbjct: 253 IEPGDGKVATRISLSLRQAEQGAGPAQAGSERK--VVDAEVVKVETFGVFVETA-TSGGI 309 Query: 478 LRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADE----KDAIAT 533 + E D VG +V G D S+R +E + K A Sbjct: 310 VPTRELDLPPGGDPRRAYPVGKQVRVVAIGTD-DKGRTRFSMRRVEETEARANFKQFRAK 368 Query: 534 VNKQEDANFSNNAMAEAFKAAKG 556 +K ++ + E KA Sbjct: 369 QSKGQNKRGDMGSFGELLKAKLE 391 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 73/360 (20%), Positives = 128/360 (35%), Gaps = 26/360 (7%) Query: 102 YEDAETVTGVINGKVKGGFTVELNG-IRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLD 160 E+V + + V++ + + G L V Sbjct: 27 LSPGESVQATVVQIGRQTVFVDVGTRSEGEIDVHELQNEKGE-LTVKVGDRLRAIV---- 81 Query: 161 QKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHI 220 + V+ S L L+ G V G V G V +G Sbjct: 82 ---QTGGDRPKLVMRFGGSGGIGDLELALESGAPVTGTVTKAVKGGLEVQIGKTRAFCPA 138 Query: 221 TDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLG----EDPWVAIAKRYPE 276 + + S G + KVL+ + V + K L E A+ ++ E Sbjct: 139 SHVHVAYTPDISIY--EGQSLAFKVLEIRDKGRSVVVSRKALLQEEREQKGKALLEQLAE 196 Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDID 336 G +TG V + YG FV++ GVEGL+H+SE+ + VV+VG+ + V VL I+ Sbjct: 197 GQIVTGTVQTIQPYGAFVDLG-GVEGLIHISELGHG-RVERVEDVVSVGEQIRVKVLTIE 254 Query: 337 EERR----RISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVH 392 RISL L+Q + A + V+ ++ + FG+F+ G+V Sbjct: 255 PGDGKVATRISLSLRQAEQGAGPAQAGSER--KVVDAEVVKVETFGVFVETATS-GGIVP 311 Query: 393 LSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGA 452 ++ G + R Y G ++ V + D ++ R ++++ E + Sbjct: 312 TREL-DLPPGGDPRRAYPVGKQVRVVAIGTD-DKGRTRFSMRRVEETEARANFKQFRAKQ 369 >UniRef50_B3SB29 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3SB29_TRIAD Length = 927 Score = 244 bits (623), Expect = 7e-63, Method: Composition-based stats. Identities = 98/539 (18%), Positives = 197/539 (36%), Gaps = 43/539 (7%) Query: 18 TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA--------------------- 56 + G V G+V I+ + V I Q + Sbjct: 77 YKKGVSVLGIVKEINPVDITVSLPGLLTGYIHITQMSSQMTQLLTRQLKSTELDGEDGVT 136 Query: 57 --QGELEIQVGDEVDVALDAVE-DGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVIN 113 ++GD + +D VE + + + T++G I Sbjct: 137 QLDLNSFFRIGDMLRCVVDEVELTKSKHKRIKLAIDPKILNAKFKANRIQTGMTLSGYIE 196 Query: 114 GKVKGGFTV--ELNGIRAFLPGSL-VDVRPVRDTLHL-EGKELEFKVIKLDQKRNNV--V 167 G+ V E+ + FL +D R+ L G + + K+ + V Sbjct: 197 SVEDHGYIVSFEIENLVGFLSQQEGLDYAKSRELEDLPVGLPVNCVIQKVKDQGRMVTVG 256 Query: 168 VSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVD-LGGVDGLLHITDMAWK 226 VS V++++ + LQ G+ V G + ++ GA + LGG G + + Sbjct: 257 VSSSKVLKAKAHEGMRFSYDTLQAGLYVNGTIAKISTKGAQLSFLGGFRGSVTADHL--- 313 Query: 227 RVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTN 286 + ++ + ++ +++ DR+ +++L L + + + I++ V Sbjct: 314 ---NQNQSLQERSKVVARIIYVDRKSKKIALSLLNITVNGQMDISQVEIGQIIEDAVVLR 370 Query: 287 LTDY-GCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLG 345 + G +++ + ++G VH+S + K G V+ + Sbjct: 371 VDKGVGLLLQLGDNLKGYVHISRASDKH-IDKFGKQHRAGSKHRCRVIANSLIDELAIIT 429 Query: 346 LKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEA 405 ++Q + G V GKI S+ DFGI + + I L +S + + Sbjct: 430 MQQSVLEQQFISYKDIKPGTLVMGKIISLEDFGILVQVTDHIKALCPRLHMSD-ITLKHP 488 Query: 406 VREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGA---IVTGKVTAVD 462 +++K+G++I VL VDA R R+ L K+ + + ++ G +++V Sbjct: 489 EKKFKEGNKIKCRVLTVDARRRRLILTHKKSMVHSSHVVITSYEEAQENVTAHGFISSVR 548 Query: 463 AKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRA 521 + G + + V G++ S +E+ V VG V VD N+ +SLS++ Sbjct: 549 SNGCFITFYNNVRGFVHKKYLSTQYIENPETVFFVGQVVLTYIVSVDAVNKKLSLSLKP 607 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 98/613 (15%), Positives = 210/613 (34%), Gaps = 78/613 (12%) Query: 7 QLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAG-LKSESAIPAEQ---FKNAQGELEI 62 ++ K + G + G + +++ +V + ++ + ++ ++ Sbjct: 174 KILNAKFKANRIQTGMTLSGYIESVEDHGYIVSFEIENLVGFLSQQEGLDYAKSRELEDL 233 Query: 63 QVGDEVDVALDAVEDGFGETLLSRE-----KAKRHEAWITLEKAYEDAETVTGVINGKVK 117 VG V+ + V+D + KAK HE + V G I Sbjct: 234 PVGLPVNCVIQKVKDQGRMVTVGVSSSKVLKAKAHEGMRFSYDTLQAGLYVNGTIAKIST 293 Query: 118 GGFTVEL-NGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIES 176 G + G R + ++ ++ E ++ ++I +D+K + A+ Sbjct: 294 KGAQLSFLGGFRGSVTADHLN----QNQSLQERSKVVARIIYVDRKSKKI-----ALSLL 344 Query: 177 ENSAERDQLLENLQEGMEVK-GIVKNLTDY-GAFVDLG-GVDGLLHITDMAWKRVKHPSE 233 + + ++ G ++ +V + G + LG + G +HI+ + K + + Sbjct: 345 NITVNGQMDISQVEIGQIIEDAVVLRVDKGVGLLLQLGDNLKGYVHISRASDKHIDKFGK 404 Query: 234 IVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCF 293 G + +V+ + ++Q + K GT + G++ +L D+G Sbjct: 405 QHRAGSKHRCRVIANSLIDELAIITMQQSVLEQQFISYKDIKPGTLVMGKIISLEDFGIL 464 Query: 294 VEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP 353 V++ + ++ L M HP K G+ ++ VL +D RRR+ L K+ + Sbjct: 465 VQVTDHIKALCPRLHMSD-ITLKHPEKKFKEGNKIKCRVLTVDARRRRLILTHKKSMVHS 523 Query: 354 WQQFAETHNKGDR---VEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYK 410 ++ + G I S+ G FI + G VH +S E + Sbjct: 524 SHVVITSYEEAQENVTAHGFISSVRSNGCFITFYNNVRGFVHKKYLSTQYI-ENPETVFF 582 Query: 411 KGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVEL 470 G + ++ VDA +++SL +K A + + +V + A+G V + Sbjct: 583 VGQVVLTYIVSVDAVNKKLSLSLKPPALTTSTSSNLKFNQSKVVDVDLFRATAEGLDVLM 642 Query: 471 AD-GVEGYLRASEASRDRVED---------------------ATLVLSVGDE-------- 500 G+ + S +++VG Sbjct: 643 QPSGLAASVPVHHLSDFHSNSRALVNYFTSQQSVNKDVNTKFLKQLVTVGKTKSSVIASR 702 Query: 501 ----VEA-------------KFTGVDRKNRAISLSVRAKD----EADEKDAIATVNKQED 539 V+A K T ++ + + +S+R D + + T+ + Sbjct: 703 KQSLVDAVQNKGVLQNFDQLKVTDIEHERKRFLVSLRLSDYLKSVGKDDAKMNTLRIFDQ 762 Query: 540 ANFSNNAMAEAFK 552 N + EA K Sbjct: 763 YLNERNTIIEAMK 775 Score = 157 bits (398), Expect = 9e-37, Method: Composition-based stats. Identities = 73/481 (15%), Positives = 172/481 (35%), Gaps = 46/481 (9%) Query: 101 AYEDAETVTGVINGKVKGGFTVELNGI-RAFLPGSLVDVRPVR----------------- 142 Y+ +V G++ TV L G+ ++ + + + + Sbjct: 76 MYKKGVSVLGIVKEINPVDITVSLPGLLTGYIHITQMSSQMTQLLTRQLKSTELDGEDGV 135 Query: 143 ---DTLHL--EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKG 197 D G L V +++ ++ R + +Q GM + G Sbjct: 136 TQLDLNSFFRIGDMLRCVVDEVELTKSK--HKRIKLAIDPKILNAKFKANRIQTGMTLSG 193 Query: 198 IVKNLTDYGAFV--DLGGVDGLLHITD-MAWKRVKHPSEIVNVGDEITVKVLKFDRERTR 254 ++++ D+G V ++ + G L + + + + + + + VG + + K + Sbjct: 194 YIESVEDHGYIVSFEIENLVGFLSQQEGLDYAKSRELED-LPVGLPVNCVIQKVKDQGRM 252 Query: 255 VSLG------LKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSE 308 V++G LK + G + G + ++ G + G G V Sbjct: 253 VTVGVSSSKVLKAKAHEGMRFSYDTLQAGLYVNGTIAKISTKGAQLSFLGGFRGSVTADH 312 Query: 309 MDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVE 368 ++ SKVV ++ +D + ++I+L L N Q G +E Sbjct: 313 LNQNQSLQERSKVV-------ARIIYVDRKSKKIALSLLNITVN-GQMDISQVEIGQIIE 364 Query: 369 GKIKSITDFGI--FIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAER 426 + D G+ + L + G VH+S S ++ ++++ G + V+ Sbjct: 365 DAVVLRVDKGVGLLLQLGDNLKGYVHISRASDKHI-DKFGKQHRAGSKHRCRVIANSLID 423 Query: 427 ERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRD 486 E + ++Q + K G +V GK+ +++ G V++ D ++ S Sbjct: 424 ELAIITMQQSVLEQQFISYKDIKPGTLVMGKIISLEDFGILVQVTDHIKALCPRLHMSDI 483 Query: 487 RVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNA 546 ++ G++++ + VD + R + L+ + I + + ++ ++ Sbjct: 484 TLKHPEKKFKEGNKIKCRVLTVDARRRRLILTHKKSMVHSSHVVITSYEEAQENVTAHGF 543 Query: 547 M 547 + Sbjct: 544 I 544 Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats. Identities = 84/560 (15%), Positives = 202/560 (36%), Gaps = 52/560 (9%) Query: 12 SLKEIETRPGSIVR-GVVVAIDKD-VVLVDAGLKSESAIPAEQFKNAQGEL---EIQVGD 66 + + G I+ VV+ +DK +L+ G + + + + + + + G Sbjct: 351 QMDISQVEIGQIIEDAVVLRVDKGVGLLLQLGDNLKGYVHISRASDKHIDKFGKQHRAGS 410 Query: 67 EVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL-N 125 + + A +++ +++ + +I+ + + V G I G V++ + Sbjct: 411 KHRCRVIANSLIDELAIITMQQSVLEQQFISYKDI-KPGTLVMGKIISLEDFGILVQVTD 469 Query: 126 GIRAFLPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERD 183 I+A P + ++ EG +++ +V+ +D +R ++++ + + + Sbjct: 470 HIKALCPRLHMSDITLKHPEKKFKEGNKIKCRVLTVDARRRRLILTHKKSMVHSSHVVI- 528 Query: 184 QLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 E QE + G + ++ G F+ V G +H ++ + +++P + VG + Sbjct: 529 TSYEEAQENVTAHGFISSVRSNGCFITFYNNVRGFVHKKYLSTQYIENPETVFFVGQVVL 588 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE-GVE 301 ++ D ++SL LK + ++ + + + T G V ++ G+ Sbjct: 589 TYIVSVDAVNKKLSLSLKPPALTTSTSSNLKFNQSKVVDVDLFRATAEGLDVLMQPSGLA 648 Query: 302 GLVHVSEMDWTNKNIHPS-KVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAET 360 V V + + N V D++ + + + + + K++ ++ Sbjct: 649 ASVPVHHLSDFHSNSRALVNYFTSQQSVN---KDVNTKFLKQLVTVGKTKSSVIASRKQS 705 Query: 361 HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNV----AGEEAVREYK-KG-DE 414 + ++ + G+ D + ++DI K G D+ Sbjct: 706 L---------VDAVQNKGVLQNFDQ-----LKVTDIEHERKRFLVSLRLSDYLKSVGKDD 751 Query: 415 IAAVVLQV-DA---ERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVEL 470 L++ D ER I +K + E P G +VTG + A+D Sbjct: 752 AKMNTLRIFDQYLNERNTIIEAMKCVYEFP----PTGILIGELVTGMIEAID-------- 799 Query: 471 ADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDA 530 + V L+ + + + L V A+ D + R + +S+ + Sbjct: 800 GNRVTLLLKKGQKAVSTISFDNADLKENSSVSARVIDFDLETRTVVVSLHPDMVSYSTKQ 859 Query: 531 IATVNKQEDANFSNNAMAEA 550 + KQ + A+ E Sbjct: 860 FHKMQKQIKVQTNTEAIIEL 879 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 70/355 (19%), Positives = 134/355 (37%), Gaps = 43/355 (12%) Query: 185 LLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVK-------------- 229 + ++G+ V GIVK + V L G + G +HIT M+ + + Sbjct: 73 TISMYKKGVSVLGIVKEINPVDITVSLPGLLTGYIHITQMSSQMTQLLTRQLKSTELDGE 132 Query: 230 ------HPSEIVNVGDEITVKVLKFDRER---TRVSLGLKQLGEDPWVAIAKRYPEGTKL 280 + +GD + V + + + R+ L + A R G L Sbjct: 133 DGVTQLDLNSFFRIGDMLRCVVDEVELTKSKHKRIKLAI-DPKILNAKFKANRIQTGMTL 191 Query: 281 TGRVTNLTDYGCFVEIE-EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEER 339 +G + ++ D+G V E E + G + E K+ + VG V ++ + ++ Sbjct: 192 SGYIESVEDHGYIVSFEIENLVGFLSQQEGLDYAKSRELED-LPVGLPVNCVIQKVKDQG 250 Query: 340 RRISLG------LKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHL 393 R +++G LK + +T G V G I I+ G + GG G V Sbjct: 251 RMVTVGVSSSKVLKAKAHEGMRFSYDTLQAGLYVNGTIAKISTKGAQLSFLGGFRGSVTA 310 Query: 394 SDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAI 453 ++ N + +E + A ++ VD + ++I+L + ++ + G I Sbjct: 311 DHLNQNQSLQERSKVV-------ARIIYVDRKSKKIALSL-LNITVNGQMDISQVEIGQI 362 Query: 454 VTGKVTAVDAKGA--TVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFT 506 + V KG ++L D ++GY+ S AS ++ G + + Sbjct: 363 IEDAVVLRVDKGVGLLLQLGDNLKGYVHISRASDKHIDKFGKQHRAGSKHRCRVI 417 Score = 62.3 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 34/194 (17%), Positives = 65/194 (33%), Gaps = 25/194 (12%) Query: 345 GLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDIS------- 397 + + + + KG V G +K I I + L G + G +H++ +S Sbjct: 61 STDKDEVSVDAITISMYKKGVSVLGIVKEINPVDITVSLPGLLTGYIHITQMSSQMTQLL 120 Query: 398 ------------WNVAGEEAVREYKKGDEIAAVVLQVDAER---ERISLGVKQLAEDPFN 442 V + ++ GD + VV +V+ + +RI L + Sbjct: 121 TRQLKSTELDGEDGVTQLDLNSFFRIGDMLRCVVDEVELTKSKHKRIKLAI-DPKILNAK 179 Query: 443 NWVALNKKGAIVTGKVTAVDAKGATVELA-DGVEGYLRASEASRDRVEDATLVLSVGDEV 501 + G ++G + +V+ G V + + G+L E L VG V Sbjct: 180 FKANRIQTGMTLSGYIESVEDHGYIVSFEIENLVGFLSQQEGLDYAKSRELEDLPVGLPV 239 Query: 502 EAKFTGVDRKNRAI 515 V + + Sbjct: 240 NCVIQKV-KDQGRM 252 Score = 41.9 bits (97), Expect = 0.076, Method: Composition-based stats. Identities = 18/119 (15%), Positives = 37/119 (31%), Gaps = 23/119 (19%) Query: 424 AERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEA 483 + + + +++ KKG V G V ++ TV L + GY+ ++ Sbjct: 53 TAKGKDIPSTDKDEVSVDAITISMYKKGVSVLGIVKEINPVDITVSLPGLLTGYIHITQM 112 Query: 484 SRDRVE--------------------DATLVLSVGDEVEAKFTGVDRKN---RAISLSV 519 S + D +GD + V+ + I L++ Sbjct: 113 SSQMTQLLTRQLKSTELDGEDGVTQLDLNSFFRIGDMLRCVVDEVELTKSKHKRIKLAI 171 >UniRef50_D1IA06 Whole genome shotgun sequence of line PN40024, scaffold_7.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1IA06_VITVI Length = 1862 Score = 244 bits (622), Expect = 9e-63, Method: Composition-based stats. Identities = 89/524 (16%), Positives = 178/524 (33%), Gaps = 32/524 (6%) Query: 20 PGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQ----FKNAQGELEIQVGDEVDVALDAV 75 PG +V V + ++ V++ + F ++ + + +V+ + + Sbjct: 316 PGMMVNARVQSTFENGVMLSFLTYFTGTVDIFHLQTTFPSSNWKDDYNQNKKVNARILFI 375 Query: 76 EDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG-GFTVELNGIRA----F 130 + L+ + +G G +E+ A + Sbjct: 376 DPSTRAVGLTLNP-HLVNNKAPPCPVKTGDIYDHSKVIRVDRGLGLLLEVPSTPASTPTY 434 Query: 131 LPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLEN 188 + V VR EG + +++ + + +A + Sbjct: 435 VTLFDVADEEVRKMEKKYKEGSHVRVRILGFRNLEGLAMGTLKASAFE----GSVFTHSD 490 Query: 189 LQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLK 247 ++ GM VK V + +GA V GV L + M+ + P + VG E+ +VL Sbjct: 491 VKPGMVVKAKVIAVDSFGAIVQFPSGVKALCPLRHMSEFDIVKPRKKFKVGAELIFRVLG 550 Query: 248 FDRERTRVSLGLKQLGEDPWVAIAKRYP---EGTKLTGRVTNLTDYGCFVEIEEGVEGLV 304 + R+++ K+ + I Y EG G +T + +GCF+ GV+G Sbjct: 551 C--KSKRITVTHKKTLLKSKLGIISSYTDATEGLITHGWITKIEKHGCFIRFYNGVQGFA 608 Query: 305 HVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKG 364 SE+ + S + +VG VV+ V RRI+L + G Sbjct: 609 PSSELGLE-PGCNTSLMYHVGQVVKCRVKGSVPASRRINLSFII--KPTRISEDDMVKLG 665 Query: 365 DRVEGKIKSITDFGIFIGLD--GGIDGLVHLSDISWNVAGEEA-VREYKKGDEIAAVVLQ 421 V G + +T I + + G + G + ++ + K G E +L Sbjct: 666 SVVGGVVDRVTPHAIIVNVSAKGYLKGTISTEHLADHQGHAALMKSTLKPGYEFD-QLLV 724 Query: 422 VDAERERISLGVKQ---LAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYL 478 +D E L K + + ++V G + + G V + G+ Sbjct: 725 LDVEGNNFILSAKYSLINSAQQLPLDLTQIHPNSVVHGYICNIIETGCFVRFLGRLTGFS 784 Query: 479 RASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAK 522 ++ D+ + +G V + V+ + I+LS++ Sbjct: 785 PRNKVMDDQRAVPSEAFFIGQSVRSNILDVNSETGRITLSLKQS 828 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 88/551 (15%), Positives = 185/551 (33%), Gaps = 40/551 (7%) Query: 9 FEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQ-----FKNAQGELE-- 61 F + PG + GVV +++ + + + A + F N + E Sbjct: 119 FANKITLKNISPGMKLWGVVAEVNEKDLGISLPGGLRGLVRASEAFDPLFSNEIKDAEGI 178 Query: 62 -----IQVGDEVDVALDAVED---GFGETLLSREKAKRHEAWITLEKAYEDAETVTGVIN 113 +G V + ++D G+ + A ++ +T + Sbjct: 179 FLPRIFHIGQLVSCVVLQLDDDKKEKGKRRIWLSLRLSLLHKGFTLDALQEGMVLTAYVK 238 Query: 114 GKVKGGFTVELN--GIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVV--S 169 G+ + FLP S + G+ L+ + +D+ V + Sbjct: 239 SIEDHGYILHFGLPSFTGFLPKS----SQAENIEINTGQILQGVIRSIDKAHKVVYLSSD 294 Query: 170 RRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVD-LGGVDGLLHITDM-AWKR 227 + + + ++ L GM V V++ + G + L G + I + Sbjct: 295 PDTISKCVTKDLKGISIDLLIPGMMVNARVQSTFENGVMLSFLTYFTGTVDIFHLQTTFP 354 Query: 228 VKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLT-GRVTN 286 + + N ++ ++L D V L L + G +V Sbjct: 355 SSNWKDDYNQNKKVNARILFIDPSTRAVGLTLNPHLVNNKAPPC-PVKTGDIYDHSKVIR 413 Query: 287 LTDY-GCFVEIEE---GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRI 342 + G +E+ V + ++ + K G V V +L Sbjct: 414 VDRGLGLLLEVPSTPASTPTYVTLFDVADE-EVRKMEKKYKEGSHVRVRILGFRNLEGLA 472 Query: 343 SLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAG 402 LK G V+ K+ ++ FG + G+ L L +S Sbjct: 473 MGTLKASAFEGSVFTHSDVKPGMVVKAKVIAVDSFGAIVQFPSGVKALCPLRHMSEFDIV 532 Query: 403 EEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALN---KKGAIVTGKVT 459 + +++K G E+ VL + +RI++ K+ ++ +G I G +T Sbjct: 533 K-PRKKFKVGAELIFRVLGC--KSKRITVTHKKTLLKSKLGIISSYTDATEGLITHGWIT 589 Query: 460 AVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLS- 518 ++ G + +GV+G+ +SE + + +L+ VG V+ + G +R I+LS Sbjct: 590 KIEKHGCFIRFYNGVQGFAPSSELGLEPGCNTSLMYHVGQVVKCRVKGSVPASRRINLSF 649 Query: 519 -VRAKDEADEK 528 ++ +++ Sbjct: 650 IIKPTRISEDD 660 Score = 202 bits (513), Expect = 3e-50, Method: Composition-based stats. Identities = 96/552 (17%), Positives = 205/552 (37%), Gaps = 61/552 (11%) Query: 13 LKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVAL 72 E +P V +V + ++ + + S I +QF + G V ++ Sbjct: 955 EAYKELQPHQTVNAIVEIVKENYL-------ASSFIARKQFLH---------GQSVIASV 998 Query: 73 DAVEDGF--GETLLSREKAKR-----HEAWITLEKAYEDAETVTGVINGKVKGGFTVELN 125 A+ G LL + + +Y V I ++ Sbjct: 999 MALPSPSTVGRLLLVLKSVSEATETSSSKRAKKKSSYNVGSLVQAEITEIKPLELRLKFG 1058 Query: 126 -GIRAFLPGSLVDVRPVRDT---LHLEGKELEFKVI------KLDQKRNNVVVSRRAVIE 175 G + + V V + G+ + +++ + + K + +S + + Sbjct: 1059 IGFHGRVHITEVCDENVIENPFSNFRIGQTVSARIVAKANKSENNGKNHQWELSIKPEML 1118 Query: 176 SENSAERDQLLE---NLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMA--WKRVK 229 + + ++L++ + G V G V + + ++ + + L + D + ++ Sbjct: 1119 TGSIEVENKLVDAEFRISTGQRVTGYVYKVENEWIWLTISRHIKAQLFLLDTSCEPNELQ 1178 Query: 230 HPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTD 289 + VG ++ VL ++E+ + + L + + +G L GR++ + Sbjct: 1179 EFQKRFEVGKAVSGYVLSANKEKKLLRMVL-----HQFSNLIPHIHKGDTLGGRISKILP 1233 Query: 290 Y--GCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERR---RISL 344 G V+I + G VH +E+ + P + G V+ VL+I + + L Sbjct: 1234 GVGGLLVQIGPHLYGKVHFTELKDSW-VSDPLSGYHEGQFVKCKVLEIGHSEKGTVHVDL 1292 Query: 345 GL-----KQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWN 399 L N + + + V+G +K++T G FI L +D + L+++S Sbjct: 1293 SLWSSLNGMHSPNSRVEKIDNLHSDMLVQGYVKNVTSKGCFILLSRKLDARILLANLSDG 1352 Query: 400 VAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLA----EDPFNNWVALNKKGAIVT 455 + RE+ G ++ VL V+ R+ + +K + + N + G I+ Sbjct: 1353 YVEK-PEREFPIGKLVSGRVLSVEPLSRRVEVTLKTSSATSVQKSEVNDFSSILVGDIIF 1411 Query: 456 GKVTAVDAKGATVELAD-GVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRA 514 G + V++ G + + D + G SE S D + + G+ V AK VD + Sbjct: 1412 GTIKRVESYGLFITIDDTNMVGLCHISELSDDHISNIETKYKAGERVAAKILKVDEERHR 1471 Query: 515 ISLSVRAKDEAD 526 ISL ++ + Sbjct: 1472 ISLGMKNSYIKE 1483 Score = 180 bits (458), Expect = 9e-44, Method: Composition-based stats. Identities = 84/546 (15%), Positives = 177/546 (32%), Gaps = 56/546 (10%) Query: 7 QLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKS-ESAIPAEQFKNAQGELEIQVG 65 L + + G ++ V +I+ ++ GL S +P + +EI G Sbjct: 216 SLLHKGFTLDALQEGMVLTAYVKSIEDHGYILHFGLPSFTGFLPKS---SQAENIEINTG 272 Query: 66 DEVDVALDAVEDGFGETLL-----SREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 + + +++ L + K + V + + G Sbjct: 273 QILQGVIRSIDKAHKVVYLSSDPDTISKCVTKDLKGISIDLLIPGMMVNARVQSTFENGV 332 Query: 121 ----------TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSR 170 TV++ ++ P S ++ K++ +++ +D V ++ Sbjct: 333 MLSFLTYFTGTVDIFHLQTTFPSSNWKDDYNQN------KKVNARILFIDPSTRAVGLTL 386 Query: 171 RAVIESENSAERDQLLENLQEGMEVK-GIVKNLTDY-GAFVDLGGVDG----LLHITDMA 224 + + + ++ G V + G +++ + + D+A Sbjct: 387 NPHLVNNKAPP-----CPVKTGDIYDHSKVIRVDRGLGLLLEVPSTPASTPTYVTLFDVA 441 Query: 225 WKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRV 284 + V+ + G + V++L F LK + V G + +V Sbjct: 442 DEEVRKMEKKYKEGSHVRVRILGFRNLEGLAMGTLKASAFEGSVFTHSDVKPGMVVKAKV 501 Query: 285 TNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISL 344 + +G V+ GV+ L + M + P K VG + VL + +RI++ Sbjct: 502 IAVDSFGAIVQFPSGVKALCPLRHMSEFDIV-KPRKKFKVGAELIFRVLGC--KSKRITV 558 Query: 345 GLKQCKANPWQQFAETH---NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVA 401 K+ ++ +G G I I G FI G+ G S++ Sbjct: 559 THKKTLLKSKLGIISSYTDATEGLITHGWITKIEKHGCFIRFYNGVQGFAPSSELGLE-P 617 Query: 402 GEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAV 461 G Y G + V RI+L + + + + K G++V G V V Sbjct: 618 GCNTSLMYHVGQVVKCRVKGSVPASRRINLS--FIIKPTRISEDDMVKLGSVVGGVVDRV 675 Query: 462 DAKGATVELADG--VEGYLRASEASRDRVEDA--TLVLSVG---DEVEAKFTGVDRKNRA 514 V ++ ++G + + + A L G D++ +D + Sbjct: 676 TPHAIIVNVSAKGYLKGTISTEHLADHQGHAALMKSTLKPGYEFDQLLV----LDVEGNN 731 Query: 515 ISLSVR 520 LS + Sbjct: 732 FILSAK 737 Score = 179 bits (453), Expect = 3e-43, Method: Composition-based stats. Identities = 105/573 (18%), Positives = 197/573 (34%), Gaps = 79/573 (13%) Query: 6 AQLFEES-LKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ---GELE 61 A FE S + +PG +V+ V+A+D +V ++ P + Sbjct: 478 ASAFEGSVFTHSDVKPGMVVKAKVIAVDSFGAIVQFPSGVKALCPLRHMSEFDIVKPRKK 537 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 +VG E+ + + + K I+ + G I K G Sbjct: 538 FKVGAELIFRVLGCKSKRITVTHKKTLLKSKLGIISSYTDATEGLITHGWITKIEKHGCF 597 Query: 122 VEL-NGIRAFLPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 + NG++ F P S + + P +T + G+ ++ +V + +V SRR + Sbjct: 598 IRFYNGVQGFAPSSELGLEPGCNTSLMYHVGQVVKCRV------KGSVPASRRINLSFII 651 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL---GGVDGLLHITDMAW--KRVKHPSE 233 R + ++ G V G+V +T + V++ G + G + +A Sbjct: 652 KPTRISEDDMVKLGSVVGGVVDRVTPHAIIVNVSAKGYLKGTISTEHLADHQGHAALMKS 711 Query: 234 IVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIA---KRYPEGTKLTGRVTNLTDY 290 + G E ++L D E L K + + + + + G + N+ + Sbjct: 712 TLKPGYEFD-QLLVLDVEGNNFILSAKYSLINSAQQLPLDLTQIHPNSVVHGYICNIIET 770 Query: 291 GCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC- 349 GCFV + G +++ + + PS+ +G V +LD++ E RI+L LKQ Sbjct: 771 GCFVRFLGRLTGFSPRNKVMDDQRAV-PSEAFFIGQSVRSNILDVNSETGRITLSLKQSC 829 Query: 350 --------------------------KANPWQQFAETHNKGDRVEGKIKSITDFGIFIGL 383 + ++AE N G +EGKI DFG+ I Sbjct: 830 CSSTDASFIQEYFLLEEKIAKLQLSDSEHSELKWAEGFNIGTVIEGKIHDAKDFGVVISF 889 Query: 384 D--GGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPF 441 + + G + ++ G + AVVL V + L +K D Sbjct: 890 EKYNDVFGFITHYQLTAER-----------GSTVQAVVLDVAKTERLVDLSLKPEFLDRH 938 Query: 442 NNWVALNKKGAIVTGKVTAVDAKGATVELADG--VEGYLRA---SEASRDRVEDATLVLS 496 + ++ G + A EL V + + + + Sbjct: 939 KEDSSNSQAG-------KKKRRREAYKELQPHQTVNAIVEIVKENYLASSFIA--RKQFL 989 Query: 497 VGDEVEAKFTGVDRKN--RAISLSVRAKDEADE 527 G V A + + + L +++ EA E Sbjct: 990 HGQSVIASVMALPSPSTVGRLLLVLKSVSEATE 1022 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 83/474 (17%), Positives = 165/474 (34%), Gaps = 35/474 (7%) Query: 104 DAETVTGVINGKVKGGFTVEL-NGIRAFLPGSL----VDVRPVRDTLH-------LEGKE 151 + GV+ + + L G+R + S + ++D G+ Sbjct: 130 PGMKLWGVVAEVNEKDLGISLPGGLRGLVRASEAFDPLFSNEIKDAEGIFLPRIFHIGQL 189 Query: 152 LEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVD- 210 + V++LD + R + + + L+ LQEGM + VK++ D+G + Sbjct: 190 VSCVVLQLDDDKKEKGKRRIWLSLRLSLLHKGFTLDALQEGMVLTAYVKSIEDHGYILHF 249 Query: 211 -LGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLG------LKQLG 263 L G L + + ++ +N G + + D+ V L K + Sbjct: 250 GLPSFTGFLPKS----SQAENIE--INTGQILQGVIRSIDKAHKVVYLSSDPDTISKCVT 303 Query: 264 EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVN 323 +D G + RV + + G + G V + + T + + N Sbjct: 304 KDLKGISIDLLIPGMMVNARVQSTFENGVMLSFLTYFTGTVDIFHLQTTFPSSNWKDDYN 363 Query: 324 VGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVE-GKIKSITDF-GIFI 381 V +L ID R + L L N + GD + K+ + G+ + Sbjct: 364 QNKKVNARILFIDPSTRAVGLTLNPHLVN-NKAPPCPVKTGDIYDHSKVIRVDRGLGLLL 422 Query: 382 GLDG---GIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAE 438 + V L D++ + ++YK+G + +L +K A Sbjct: 423 EVPSTPASTPTYVTLFDVADEEVRK-MEKKYKEGSHVRVRILGFRNLEGLAMGTLKASAF 481 Query: 439 DPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVG 498 + + K G +V KV AVD+ GA V+ GV+ S + VG Sbjct: 482 EGSVFTHSDVKPGMVVKAKVIAVDSFGAIVQFPSGVKALCPLRHMSEFDIVKPRKKFKVG 541 Query: 499 DEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFK 552 E+ + G K++ I+++ + + I++ + ++ + + K Sbjct: 542 AELIFRVLGC--KSKRITVTHKKTLLKSKLGIISSYTDATEGLITHGWITKIEK 593 Score = 98.5 bits (244), Expect = 6e-19, Method: Composition-based stats. Identities = 51/280 (18%), Positives = 98/280 (35%), Gaps = 29/280 (10%) Query: 261 QLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSK 320 +L K G KL G V + + + + G+ GLV SE + Sbjct: 115 KLPRFANKITLKNISPGMKLWGVVAEVNEKDLGISLPGGLRGLVRASEAFDPLFSNEIKD 174 Query: 321 --------VVNVGDVVEVMVLDIDEE-----RRRISLGLKQCKANPWQQFAETHNKGDRV 367 + ++G +V +VL +D++ +RRI L L+ + + +G + Sbjct: 175 AEGIFLPRIFHIGQLVSCVVLQLDDDKKEKGKRRIWLSLRLSLLHKG-FTLDALQEGMVL 233 Query: 368 EGKIKSITDFGIFIGLD-GGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAER 426 +KSI D G + G + S + N+ E G + V+ +D Sbjct: 234 TAYVKSIEDHGYILHFGLPSFTGFLPKSSQAENI-------EINTGQILQGVIRSIDKAH 286 Query: 427 ERISLG------VKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRA 480 + + L K + +D + L G +V +V + G + G + Sbjct: 287 KVVYLSSDPDTISKCVTKDLKGISIDLLIPGMMVNARVQSTFENGVMLSFLTYFTGTVDI 346 Query: 481 SEASRDRV-EDATLVLSVGDEVEAKFTGVDRKNRAISLSV 519 + + +V A+ +D RA+ L++ Sbjct: 347 FHLQTTFPSSNWKDDYNQNKKVNARILFIDPSTRAVGLTL 386 Score = 58.8 bits (141), Expect = 5e-07, Method: Composition-based stats. Identities = 10/91 (10%), Positives = 27/91 (29%), Gaps = 4/91 (4%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGL-KSESAIPAEQFKN---AQGELEIQVGD 66 E G I+ G + ++ + + + + + E + + G+ Sbjct: 1397 EVNDFSSILVGDIIFGTIKRVESYGLFITIDDTNMVGLCHISELSDDHISNIETKYKAGE 1456 Query: 67 EVDVALDAVEDGFGETLLSREKAKRHEAWIT 97 V + V++ L + + E Sbjct: 1457 RVAAKILKVDEERHRISLGMKNSYIKETTQN 1487 >UniRef50_Q4EP69 Ribosomal protein S1, putative (Fragment) n=1 Tax=Listeria monocytogenes str. 1/2a F6854 RepID=Q4EP69_LISMO Length = 355 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 103/300 (34%), Positives = 167/300 (55%), Gaps = 12/300 (4%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDA-GLKSESAIPAEQFKNAQGE 59 M+E ++ G V G V +++ V V G K + +P + N E Sbjct: 63 MSEDLFD-----VEVRNFEEGDKVTGTVTSVEDKQVYVGIPGSKLDGVVPISELSNIHVE 117 Query: 60 ---LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKV 116 + VGD +D+ + VED +LS+ K +A ++ +E E V++ V Sbjct: 118 TASDVVSVGDTLDLIVTKVEDD--ILVLSKRKVDAEKASDDIKAKFESGEVFEAVVSDVV 175 Query: 117 KGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIES 176 KGG V+L G+RAF+P SLV+ V D +G L FKV++ + + N V++S RAV+E+ Sbjct: 176 KGGLVVDL-GVRAFVPASLVEDHFVEDFADYKGTTLTFKVVEFEPENNRVILSHRAVVET 234 Query: 177 ENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVN 236 E ++++ LL ++EG ++G V+ L ++GAFVD+GGVDGL+HI+ +++K + P E++ Sbjct: 235 EKASQKQALLSEIKEGDVIEGTVQRLANFGAFVDIGGVDGLVHISQISYKHIATPQEVLE 294 Query: 237 VGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI 296 G ++TVKV+ D E R+SL +K PW I ++ G+ L G+V L +G FVEI Sbjct: 295 EGQKVTVKVIGIDPENERISLSIKATLPGPWDGITEKAQVGSVLEGKVVRLVTFGAFVEI 354 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 64/292 (21%), Positives = 122/292 (41%), Gaps = 21/292 (7%) Query: 272 KRYPEGTKLTGRVTNLTDYGCFVEI-EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEV 330 + + EG K+TG VT++ D +V I ++G+V +SE+ + S VV+VGD +++ Sbjct: 73 RNFEEGDKVTGTVTSVEDKQVYVGIPGSKLDGVVPISELSNIH-VETASDVVSVGDTLDL 131 Query: 331 MVLDIDEERRRISLGLKQCK-ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDG 389 +V ++++ + L ++ G+ E + + G+ + L G+ Sbjct: 132 IVTKVEDDI--LVLSKRKVDAEKASDDIKAKFESGEVFEAVVSDVVKGGLVVDL--GVRA 187 Query: 390 LVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALN- 448 V S + + + A + G + V++ + E R+ L + + E + Sbjct: 188 FVPASLVEDHFVEDFADYK---GTTLTFKVVEFEPENNRVILSHRAVVETEKASQKQALL 244 Query: 449 ---KKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKF 505 K+G ++ G V + GA V++ GV+G + S+ S + VL G +V K Sbjct: 245 SEIKEGDVIEGTVQRLANFGAFVDIG-GVDGLVHISQISYKHIATPQEVLEEGQKVTVKV 303 Query: 506 TGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDAN------FSNNAMAEAF 551 G+D +N ISLS++A + A E F Sbjct: 304 IGIDPENERISLSIKATLPGPWDGITEKAQVGSVLEGKVVRLVTFGAFVEIF 355 >UniRef50_O74835 rRNA biogenesis protein rrp5 n=1 Tax=Schizosaccharomyces pombe RepID=RRP5_SCHPO Length = 1690 Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats. Identities = 103/585 (17%), Positives = 198/585 (33%), Gaps = 43/585 (7%) Query: 7 QLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAI-------PAEQFKNAQGE 59 + E PG + +V I + V+ K + + K E Sbjct: 292 KALEVMPSVQAILPGDYINVLVTDIKESGVI----AKYMGVVDVTSDIYHSSPVKGEDLE 347 Query: 60 LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG- 118 + Q+ V + V G + + G I K Sbjct: 348 DKFQLAKSVPARVLFVIPGDPPKIAVSFLPHVLTFNFATPNTPHPDQLDIGFIVNAAKVT 407 Query: 119 ------GFTVELN--GIRAFLPGSLVDVRPVRDTLH-----LEGKELEFKVIKLDQKRNN 165 G ++ I F S + + V E ++I N Sbjct: 408 YVSSSLGVFCDVGVPEISGFAHISRLSDKKVAGISPNSGPYKVDSTHEARIINYSYVDNL 467 Query: 166 VVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMA 224 ++ + ++ +E+++ G V G + L G V + G++GL+ T MA Sbjct: 468 YIL----SFQQSVLNQQFLRIEDIEVGQFVDGTIAKLIPQGIVVTISEGINGLVPSTHMA 523 Query: 225 WKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLG---EDPWVAIAKRYPEGTKLT 281 ++ P VG + +VL + R RV L LK+ + P + ++ GT+ Sbjct: 524 DIALQFPERRFKVGSSVKCRVLSTNVLRKRVLLTLKKSLLNTDLPLIYDYEQATPGTQTV 583 Query: 282 GRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRR 341 G + + + G VE V + VSEM + VG + V ++ D E R+ Sbjct: 584 GTLARIFEDGAIVEFYNSVRAFLPVSEMSEAY-IRDAREHFKVGQTLSVTIVSCDPENRK 642 Query: 342 ISLGLKQCKANPWQ-QFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISW-- 398 + +G ++ + + + E G + G + T+ + + L + G++ L + Sbjct: 643 MRVGCREQSWDAKRLERFENIKAGSVLSGIVLQKTEDSVIVDLGDKVTGVITLGQLCDGD 702 Query: 399 -NVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQL-----AEDPFNNWVALNKKGA 452 N + + +VL+ D ++ ISL +K+ E+ + K+G Sbjct: 703 LNKCSKVMNKLRASTKLAEVLVLRKDTSKKLISLSLKKSLVEAAKENRMPINITDLKEGI 762 Query: 453 IVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKN 512 G V G VE DG+ + + S + V + V V V+ Sbjct: 763 KYFGFVRNATTFGVFVEFCDGLVALVPKAYISEEYVPVPSAVYKPQQSVTCVCLSVELSQ 822 Query: 513 RAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAAKGE 557 +S + + EK +K + N + + + + G+ Sbjct: 823 EKAFMSFKPLAQKQEKAVEFMESKYDIDNPVDETIKKTYDYVAGK 867 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 95/586 (16%), Positives = 202/586 (34%), Gaps = 67/586 (11%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIP---AEQFKNAQGELEIQVGDEVDVALD 73 + + G G V V V+ + +P + + V Sbjct: 757 DLKEGIKYFGFVRNATTFGVFVEFCDGLVALVPKAYISEEYVPVPSAVYKPQQSVTCVCL 816 Query: 74 AVE--DGFGETLLSREKAKRHEAWITLEKAYEDAETVT----------------GVINGK 115 +VE K+ +A +E Y+ V V+ Sbjct: 817 SVELSQEKAFMSFKPLAQKQEKAVEFMESKYDIDNPVDETIKKTYDYVAGKITWAVVTSA 876 Query: 116 VKGGFTVELN-GIRAFLPGSLVDVRPVRDTLH-------LEGKELEFKVIKLD--QKRNN 165 V+L + + S V +G ++ +V+ + + Sbjct: 877 KASQLNVDLAANVHGRVDVSEVFDNFGEIVDPNKPLKRFHKGDKIRVRVLGIHDSRNHKF 936 Query: 166 VVVSRRAVIESENSAERDQLLENLQE----------GMEVKGIVKNLTDYGAFVDL-GGV 214 + +S R + + N++ G EV G V N++ +V L V Sbjct: 937 LPISHRVSPKQFLELSVRPSILNMEPFSMKEPQFKKGDEVTGFVNNVSKECVWVSLTPSV 996 Query: 215 DGLLHITDMAWK--RVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAK 272 +G + I D+ + + +G I V + E S+ L +G + Sbjct: 997 NGRIPILDLTTDVKELNSLQKHFFLGKAIKCYV--VNAED---SITLSAIGPLQGF---E 1048 Query: 273 RYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMV 332 G++L G+VTN+ + G +++ + G V +M + P ++V V V Sbjct: 1049 NLTPGSRLVGKVTNVNEAGAILQLPGHMSGRVSRIDMFDDYDIL-PETKFTRNNLVGVCV 1107 Query: 333 LDIDEERRRISLGLKQCK--------ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLD 384 L +D R+++L + + + + GD G + ++ + G+F+ + Sbjct: 1108 LSVDVPNRKVALSARNSRTQSQPVEIKDKEINSVDDLKIGDICRGFVCNVANQGLFVTIG 1167 Query: 385 GGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNW 444 + V + ++ ++ + + ++ +D + +RI + +KQ + Sbjct: 1168 HNLIARVKIGELFDTFI-KDWKPHFHVNQLVKGSIVGIDNDSKRIEMSLKQSKIKDSSEI 1226 Query: 445 VALNK---KGAIVTGKVTAVDAKGATVELA--DGVEGYLRASEASRDRVEDATLVLSVGD 499 G+ + G V V G + + D + G SE + V + + + S GD Sbjct: 1227 TKTFADIAVGSNLDGTVVKVGDYGVLIRIDGTDNIVGLCHKSEIADAVVLNISKLYSSGD 1286 Query: 500 EVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNN 545 +V A VD + R I+L +++ + D + N+++ S + Sbjct: 1287 KVRAHVLDVDSEKRRIALGLKSSYFDSDSDISMSDNEEDVEMRSED 1332 Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats. Identities = 98/597 (16%), Positives = 215/597 (36%), Gaps = 69/597 (11%) Query: 13 LKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEV---- 68 + + GS++ G+V+ +D V+VD G K I Q + +V +++ Sbjct: 658 ERFENIKAGSVLSGIVLQKTEDSVIVDLGDKVTGVITLGQLCDGDLNKCSKVMNKLRAST 717 Query: 69 ---DVALDAVEDGFGETLLSREKAKRHEAWITLEKA----YEDAETVTGVINGKVKGGFT 121 +V + + LS +K+ A ++ G + G Sbjct: 718 KLAEVLVLRKDTSKKLISLSLKKSLVEAAKENRMPINITDLKEGIKYFGFVRNATTFGVF 777 Query: 122 VEL-NGIRAFLPGSLVDVRPVRDTL--HLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 VE +G+ A +P + + V + + + + ++ + +S + + + + Sbjct: 778 VEFCDGLVALVPKAYISEEYVPVPSAVYKPQQSVTCVCLSVELSQEKAFMSFKPLAQKQE 837 Query: 179 SAER---------------DQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITD 222 A + + G +V + VDL V G + +++ Sbjct: 838 KAVEFMESKYDIDNPVDETIKKTYDYVAGKITWAVVTSAKASQLNVDLAANVHGRVDVSE 897 Query: 223 MAWKR-----VKHPSEIVNVGDEITVKVLKFDRERTR--------------VSLGLKQ-- 261 + P + + GD+I V+VL R + L ++ Sbjct: 898 VFDNFGEIVDPNKPLKRFHKGDKIRVRVLGIHDSRNHKFLPISHRVSPKQFLELSVRPSI 957 Query: 262 LGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIH-PSK 320 L +P+ ++ +G ++TG V N++ +V + V G + + ++ K ++ K Sbjct: 958 LNMEPFSMKEPQFKKGDEVTGFVNNVSKECVWVSLTPSVNGRIPILDLTTDVKELNSLQK 1017 Query: 321 VVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIF 380 +G ++ V++ ++ I+L Q E G R+ GK+ ++ + G Sbjct: 1018 HFFLGKAIKCYVVNAEDS---ITLSAIG-----PLQGFENLTPGSRLVGKVTNVNEAGAI 1069 Query: 381 IGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLA--- 437 + L G + G V D+ + ++ + + + VL VD +++L + Sbjct: 1070 LQLPGHMSGRVSRIDMFDDYDI-LPETKFTRNNLVGVCVLSVDVPNRKVALSARNSRTQS 1128 Query: 438 -----EDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDAT 492 +D N V K G I G V V +G V + + ++ E ++D Sbjct: 1129 QPVEIKDKEINSVDDLKIGDICRGFVCNVANQGLFVTIGHNLIARVKIGELFDTFIKDWK 1188 Query: 493 LVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAE 549 V V+ G+D ++ I +S++ D + T + + + + Sbjct: 1189 PHFHVNQLVKGSIVGIDNDSKRIEMSLKQSKIKDSSEITKTFADIAVGSNLDGTVVK 1245 Score = 208 bits (529), Expect = 5e-52, Method: Composition-based stats. Identities = 93/547 (17%), Positives = 188/547 (34%), Gaps = 28/547 (5%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAG-LKSESAIPAEQFKNAQGELEIQVGDEVDVALDAV 75 + GS+++ VV +I+ ++ D G + + + G + ++ + Sbjct: 222 DFVAGSMIQAVVSSIEDHGIVFDIGINNYTGFLSKKHINDF----PFVEGQSLLCSVISK 277 Query: 76 EDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNG-IRAFLPGS 134 ED L+ K E +++ + ++ + G + G + Sbjct: 278 EDRIFHLSLTATSTKALEVMPSVQAILPGDY-INVLVTDIKESGVIAKYMGVVDVTSDIY 336 Query: 135 LVDVRPVRDTLHL--EGKELEFKVIKLDQKRN--NVVVSRRAVIESENSAERDQLLENLQ 190 D K + +V+ + V V+ + + L Sbjct: 337 HSSPVKGEDLEDKFQLAKSVPARVLFVIPGDPPKIAVSFLPHVLTFNFATPNTPHPDQLD 396 Query: 191 EGMEVK-GIVKNLTDY-GAFVDLG--GVDGLLHITDMAWKRVKHPSEI---VNVGDEITV 243 G V V ++ G F D+G + G HI+ ++ K+V S V Sbjct: 397 IGFIVNAAKVTYVSSSLGVFCDVGVPEISGFAHISRLSDKKVAGISPNSGPYKVDSTHEA 456 Query: 244 KVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGL 303 +++ + L +Q + + G + G + L G V I EG+ GL Sbjct: 457 RIINYSYVDNLYILSFQQSVLNQQFLRIEDIEVGQFVDGTIAKLIPQGIVVTISEGINGL 516 Query: 304 VHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHN- 362 V + M P + VG V+ VL + R+R+ L LK+ N + Sbjct: 517 VPSTHMADIALQF-PERRFKVGSSVKCRVLSTNVLRKRVLLTLKKSLLNTDLPLIYDYEQ 575 Query: 363 --KGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL 420 G + G + I + G + + + +S++S +A +K G ++ ++ Sbjct: 576 ATPGTQTVGTLARIFEDGAIVEFYNSVRAFLPVSEMSEAYI-RDAREHFKVGQTLSVTIV 634 Query: 421 QVDAERERISLGVK-QLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLR 479 D E ++ +G + Q + K G++++G V V+L D V G + Sbjct: 635 SCDPENRKMRVGCREQSWDAKRLERFENIKAGSVLSGIVLQKTEDSVIVDLGDKVTGVIT 694 Query: 480 ASEASRDRVEDATLV---LSVGDEV-EAKFTGVDRKNRAISLSVRAKDEADEKDAIATVN 535 + + + V L ++ E D + ISLS++ K+ +N Sbjct: 695 LGQLCDGDLNKCSKVMNKLRASTKLAEVLVLRKDTSKKLISLSLKKSLVEAAKENRMPIN 754 Query: 536 KQEDANF 542 + Sbjct: 755 ITDLKEG 761 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 94/595 (15%), Positives = 192/595 (32%), Gaps = 64/595 (10%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN--------------- 55 +SL+ PGS++ G + I+ + V +P + Sbjct: 99 QSLRYKNITPGSLILGQIAQINTLDLAVSLPNCLTGYVPITNISDKLSDRLDSIDNHAED 158 Query: 56 -------------AQGELEIQVGDEVDVALDAVEDGF------GETLLSREKAKRHEAWI 96 +VG V V++ A+ LS + + + Sbjct: 159 NAATEEEDGLNQIPDLMDLYKVGQWVRVSVTALGSENTTKTGKRHIELSLKPQDANGSAP 218 Query: 97 TLEKAYEDAETVTGVINGKVKGGFTVE--LNGIRAFLPGSLVDVRPVRDTLHLEGKELEF 154 + + V++ G + +N FL + + D +EG+ L Sbjct: 219 EAADFVAGSM-IQAVVSSIEDHGIVFDIGINNYTGFL-----SKKHINDFPFVEGQSLLC 272 Query: 155 KVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG- 213 VI ++ +S A ++ + G + +V ++ + G G Sbjct: 273 SVIS--KEDRIFHLSLTATSTKALEVMPS--VQAILPGDYINVLVTDIKESGVIAKYMGV 328 Query: 214 VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDR-ERTRVSLGLKQLGEDPWVAIAK 272 VD I + + + + + + +VL + ++++ A Sbjct: 329 VDVTSDIYHSSPVKGEDLEDKFQLAKSVPARVLFVIPGDPPKIAVSFLPHVLTFNFATPN 388 Query: 273 RYPEGTKLTGRVTNLTDY-------GCFVEIE-EGVEGLVHVSEMDWTNK--NIHPSKVV 322 G + N G F ++ + G H+S + S Sbjct: 389 TPHPDQLDIGFIVNAAKVTYVSSSLGVFCDVGVPEISGFAHISRLSDKKVAGISPNSGPY 448 Query: 323 NVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIG 382 V E +++ L +Q N E G V+G I + GI + Sbjct: 449 KVDSTHEARIINYSYVDNLYILSFQQSVLNQQFLRIEDIEVGQFVDGTIAKLIPQGIVVT 508 Query: 383 LDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQ---LAED 439 + GI+GLV + ++ +A + R +K G + VL + R+R+ L +K+ + Sbjct: 509 ISEGINGLVPSTHMAD-IALQFPERRFKVGSSVKCRVLSTNVLRKRVLLTLKKSLLNTDL 567 Query: 440 PFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGD 499 P G G + + GA VE + V +L SE S + DA VG Sbjct: 568 PLIYDYEQATPGTQTVGTLARIFEDGAIVEFYNSVRAFLPVSEMSEAYIRDAREHFKVGQ 627 Query: 500 EVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAA 554 + D +NR + + R +++ + + + + + + + + + Sbjct: 628 TLSVTIVSCDPENRKMRVGCR--EQSWDAKRLERFENIKAGSVLSGIVLQKTEDS 680 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 101/590 (17%), Positives = 206/590 (34%), Gaps = 60/590 (10%) Query: 14 KEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE---IQVGDEVDV 70 + PG+ G + I +D +V+ + +P + A +VG + V Sbjct: 572 DYEQATPGTQTVGTLARIFEDGAIVEFYNSVRAFLPVSEMSEAYIRDAREHFKVGQTLSV 631 Query: 71 ALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRA 129 + + + + + + + + + ++G++ K + V+L + Sbjct: 632 TIVSCDPENRKMRVGCREQSWDAKRLERFENIKAGSVLSGIVLQKTEDSVIVDLGDKVTG 691 Query: 130 FLPGSLVDVRPVRDTLHLEGKEL------EFKVIKLDQKRNNVVVSRRAVIESENSAERD 183 + + + + K E V++ D + + +S + + R Sbjct: 692 VITLGQLCDGDLNKCSKVMNKLRASTKLAEVLVLRKDTSKKLISLSLKKSLVEAAKENRM 751 Query: 184 QL-LENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEI 241 + + +L+EG++ G V+N T +G FV+ G+ L+ ++ + V PS + + Sbjct: 752 PINITDLKEGIKYFGFVRNATTFGVFVEFCDGLVALVPKAYISEEYVPVPSAVYKPQQSV 811 Query: 242 TVKVLKFDRERTRVSLGLKQLGEDPWVAIA-------------------KRYPEGTKLTG 282 T L + + + + K L + A+ Y G Sbjct: 812 TCVCLSVELSQEKAFMSFKPLAQKQEKAVEFMESKYDIDNPVDETIKKTYDYVAGKITWA 871 Query: 283 RVTNLTDYGCFVEIEEGVEGLVHVSEMDWTN----KNIHPSKVVNVGDVVEVMVLDIDEE 338 VT+ V++ V G V VSE+ P K + GD + V VL I + Sbjct: 872 VVTSAKASQLNVDLAANVHGRVDVSEVFDNFGEIVDPNKPLKRFHKGDKIRVRVLGIHDS 931 Query: 339 RRR--------------ISLGLKQ--CKANPWQQFAETHNKGDRVEGKIKSITDFGIFIG 382 R + L ++ P+ KGD V G + +++ +++ Sbjct: 932 RNHKFLPISHRVSPKQFLELSVRPSILNMEPFSMKEPQFKKGDEVTGFVNNVSKECVWVS 991 Query: 383 LDGGIDGLVHLSDISWNVA-GEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPF 441 L ++G + + D++ +V + + G I V V+AE I+L + Sbjct: 992 LTPSVNGRIPILDLTTDVKELNSLQKHFFLGKAIKCYV--VNAED-SITLSAIGPLQG-- 1046 Query: 442 NNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEV 501 G+ + GKVT V+ GA ++L + G + + D + + V Sbjct: 1047 ---FENLTPGSRLVGKVTNVNEAGAILQLPGHMSGRVSRIDMFDDYDILPETKFTRNNLV 1103 Query: 502 EAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAF 551 VD NR ++LS R + I + + F Sbjct: 1104 GVCVLSVDVPNRKVALSARNSRTQSQPVEIKDKEINSVDDLKIGDICRGF 1153 Score = 157 bits (398), Expect = 8e-37, Method: Composition-based stats. Identities = 81/373 (21%), Positives = 142/373 (38%), Gaps = 28/373 (7%) Query: 12 SLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE-----IQVGD 66 S+KE + + G V G V + K+ V V IP EL +G Sbjct: 964 SMKEPQFKKGDEVTGFVNNVSKECVWVSLTPSVNGRIPILDLTTDVKELNSLQKHFFLGK 1023 Query: 67 EVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNG 126 + + ED LS + + + G + + G ++L G Sbjct: 1024 AIKCYVVNAEDS---ITLSAIGPLQGF------ENLTPGSRLVGKVTNVNEAGAILQLPG 1074 Query: 127 I-RAFLPGSLVDVRPV--RDTLHLEGKELEFKVIKLDQKRNNVVVSRR----AVIESENS 179 + + +T + V+ +D V +S R E Sbjct: 1075 HMSGRVSRIDMFDDYDILPETKFTRNNLVGVCVLSVDVPNRKVALSARNSRTQSQPVEIK 1134 Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVG 238 + +++L+ G +G V N+ + G FV +G + + I ++ +K +V Sbjct: 1135 DKEINSVDDLKIGDICRGFVCNVANQGLFVTIGHNLIARVKIGELFDTFIKDWKPHFHVN 1194 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAK---RYPEGTKLTGRVTNLTDYGCFVE 295 + ++ D + R+ + LKQ I K G+ L G V + DYG + Sbjct: 1195 QLVKGSIVGIDNDSKRIEMSLKQSKIKDSSEITKTFADIAVGSNLDGTVVKVGDYGVLIR 1254 Query: 296 IE--EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP 353 I+ + + GL H SE+ ++ SK+ + GD V VLD+D E+RRI+LGLK + Sbjct: 1255 IDGTDNIVGLCHKSEIADA-VVLNISKLYSSGDKVRAHVLDVDSEKRRIALGLKSSYFDS 1313 Query: 354 WQQFAETHNKGDR 366 + + N+ D Sbjct: 1314 DSDISMSDNEEDV 1326 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 65/418 (15%), Positives = 134/418 (32%), Gaps = 54/418 (12%) Query: 175 ESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWK------- 226 E+ + +N+ G + G + + V L + G + IT+++ K Sbjct: 92 ENLKVHIQSLRYKNITPGSLILGQIAQINTLDLAVSLPNCLTGYVPITNISDKLSDRLDS 151 Query: 227 ------------------RVKHPSEIVNVGDEITVKVLKFDRE------RTRVSLGLKQL 262 ++ ++ VG + V V E + + L LK Sbjct: 152 IDNHAEDNAATEEEDGLNQIPDLMDLYKVGQWVRVSVTALGSENTTKTGKRHIELSLKPQ 211 Query: 263 GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE-EGVEGLVHVSEMDWTNKNIHPSKV 321 + A + G+ + V+++ D+G +I G + ++ Sbjct: 212 DANGSAPEAADFVAGSMIQAVVSSIEDHGIVFDIGINNYTGFLSKKHINDFPFV------ 265 Query: 322 VNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFI 381 G + V+ ++ +SL KA + GD + + I + G+ Sbjct: 266 --EGQSLLCSVISKEDRIFHLSLTATSTKALEVMPSVQAILPGDYINVLVTDIKESGVIA 323 Query: 382 GLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDA-ERERISLG-----VKQ 435 G +D + S V GE+ +++ + A VL V + +I++ + Sbjct: 324 KYMGVVDVTSDIYH-SSPVKGEDLEDKFQLAKSVPARVLFVIPGDPPKIAVSFLPHVLTF 382 Query: 436 LAEDPFNNWVALNKKGAIVT-GKVTAVDAK-GATVELA-DGVEGYLRASEASRDRVEDAT 492 P G IV KVT V + G ++ + G+ S S +V + Sbjct: 383 NFATPNTPHPDQLDIGFIVNAAKVTYVSSSLGVFCDVGVPEISGFAHISRLSDKKVAGIS 442 Query: 493 LV---LSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAM 547 V EA+ + LS + + I + + + + + Sbjct: 443 PNSGPYKVDSTHEARIINYSYVDNLYILSFQQSVLNQQFLRIEDIEVGQFVDGTIAKL 500 Score = 76.2 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 23/174 (13%), Positives = 56/174 (32%), Gaps = 10/174 (5%) Query: 10 EESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL---EIQVGD 66 +E + + G I RG V + + V G + + + + + V Sbjct: 1136 KEINSVDDLKIGDICRGFVCNVANQGLFVTIGHNLIARVKIGELFDTFIKDWKPHFHVNQ 1195 Query: 67 EVDVALDAVEDGFGET--LLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL 124 V ++ +++ L + K K + G + G + + Sbjct: 1196 LVKGSIVGIDNDSKRIEMSLKQSKIKDSSEITKTFADIAVGSNLDGTVVKVGDYGVLIRI 1255 Query: 125 NG---IRAFLPGSLVDVRPVRDTLHLE--GKELEFKVIKLDQKRNNVVVSRRAV 173 +G I S + V + L G ++ V+ +D ++ + + ++ Sbjct: 1256 DGTDNIVGLCHKSEIADAVVLNISKLYSSGDKVRAHVLDVDSEKRRIALGLKSS 1309 >UniRef50_C5DF89 KLTH0D13156p n=2 Tax=Saccharomycetaceae RepID=C5DF89_LACTC Length = 1731 Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 101/573 (17%), Positives = 213/573 (37%), Gaps = 58/573 (10%) Query: 25 RGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQG---ELEIQVGDEVDVALDAVEDGFGE 81 G V ++ + V V + + +++ + V V L +D Sbjct: 799 NGYVKSVSEKGVFVAFNGQFVGLVLPSYAVDSRDVSLSSKFYVNQSVSAFLLRTDDDNER 858 Query: 82 TLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF-----------------TVEL 124 LLS ++ K ++ T E V I + V Sbjct: 859 FLLSFKEPKNEKSSKTPESERPAINPVDQSIKEVSEFALGKVTKAKVKAVKKNQLNVVLS 918 Query: 125 NGIRAFLPGSLVDVRP--VRDTLHL-----EGKELEFKVIKLDQKRN-----------NV 166 + + + S V + ++D +G L+ KVI ++ Sbjct: 919 DNLHGRIDISEVFDKFEDIKDPKKPLATFKKGDVLDVKVIGFHDVKSHKFLPVSHRSSKN 978 Query: 167 VVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAW 225 V+ + S + +++++ G + G V N++ ++ + + + D+A Sbjct: 979 VLIELSAKPSSLAGVNHATIKDVKVGDSIVGFVNNVSKDIMWLTVSPSLKAKIDFFDLAD 1038 Query: 226 KRVKH---PSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTG 282 + + + +G + KV+ D++R +S+ + K G L Sbjct: 1039 ENSQLGHGIEDSFPLGCALRTKVVSIDQDRNTLSVSARTHDIKG----IKDINVGDCLPA 1094 Query: 283 RVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVV--NVGDVVEVMVLDIDEERR 340 R+ +TD +E+ E V G+ ++ + + V +V V+ ID++ Sbjct: 1095 RLLKITDSYLLLELGENVRGVAFATD-ALDDYSKPLKDVYANQKNSIVSAKVISIDKDDG 1153 Query: 341 RISLGLKQCKA-NPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWN 399 +++L L+ + + E +GD V G +K IT+ GIFI L + V +S ++ + Sbjct: 1154 KLNLSLRSENPRDGTAKTHEDLKRGDVVRGLVKKITEKGIFIYLSSTLQAFVPVSKLTDS 1213 Query: 400 VAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLA---EDPFNNWVALNKKGAIVTG 456 ++ + +K + V+ D + I + +K+ E K G I G Sbjct: 1214 FI-KDWRKFFKPMQSVVGKVVNCD-DDSHILVTLKESEVNGELRILKSYNDIKVGEIFEG 1271 Query: 457 KVTAVDAKGATVELAD--GVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRA 514 V V G V+L + V G +E + V D + VGD+V+A V+ + Sbjct: 1272 AVKNVTDFGLFVKLDNTVNVTGLAHKTEVADSAVGDLASIFGVGDKVKAIVLKVNPDKKQ 1331 Query: 515 ISLSVRAKD-EADEKDAIATVNKQEDANFSNNA 546 +SL ++A + ++ + + ++ + S++ Sbjct: 1332 LSLGLKASYFKESNENQASDDAEGDEGSESSDE 1364 Score = 175 bits (445), Expect = 3e-42, Method: Composition-based stats. Identities = 104/589 (17%), Positives = 220/589 (37%), Gaps = 72/589 (12%) Query: 11 ESLKEIETRPGSIVRGV-VVAIDKDVVLVDA-GLKSESAIP---AEQFKNAQGELEIQVG 65 E L+ I+ G+IV G + + + + G + ++ +P + E + ++G Sbjct: 501 EYLRPIDIPVGTIVPGCEITEVSDKGIKLSIFGGQFKATVPPLHISDIRLVYPERKFKIG 560 Query: 66 DEVD-VALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETV-------TGVINGKVK 117 +V + ++A E G L + L ++ED E + ++ Sbjct: 561 SKVKGILINATERGQLFMSLKKSLVNLDREETELASSFEDIEKIASSDSKLAATVDIFKP 620 Query: 118 GGFTVEL-NGIRAFLPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRAVI 174 G V NG+R FLP S + V+ G+ + KV++ ++++N V+V+ + Sbjct: 621 NGCIVSFLNGLRGFLPNSNISEAYVKRPQDHLRLGQTVIVKVLQHNKEQNRVIVTCKVSS 680 Query: 175 ESENSAERDQLLENLQEG-MEVKGIVKNLTDYGAFVD--LGGVDGLLHITDMAWKRVKHP 231 E+ + + + +EN+ G +K V T V+ G+ G++++ ++ RV+ Sbjct: 681 EAASL--QREAIENMIVGRSIIKVAVVEKTKDSIVVEQVGTGLRGVVYVGHLSDSRVEQN 738 Query: 232 S---EIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTK--------L 280 + + +G E+ V+ D +L K+ Sbjct: 739 RAQLKKLKIGSELEGLVIDKDERTRVFNLSCKKSLMKDAEKSLLPLNYQDVKQRGNHSPF 798 Query: 281 TGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERR 340 G V ++++ G FV GLV S ++++ S V V +L D++ Sbjct: 799 NGYVKSVSEKGVFVAFNGQFVGLVLPS-YAVDSRDVSLSSKFYVNQSVSAFLLRTDDDNE 857 Query: 341 RISLGLKQCKANPWQQFAETHNKG-DRVEGKIKSITDFGIF----------------IGL 383 R L K+ K + E+ + V+ IK +++F + + L Sbjct: 858 RFLLSFKEPKNEKSSKTPESERPAINPVDQSIKEVSEFALGKVTKAKVKAVKKNQLNVVL 917 Query: 384 DGGIDGLVHLSDISWNVA----GEEAVREYKKGDEIAAVVLQV-DAERER---------- 428 + G + +S++ ++ + +KKGD + V+ D + + Sbjct: 918 SDNLHGRIDISEVFDKFEDIKDPKKPLATFKKGDVLDVKVIGFHDVKSHKFLPVSHRSSK 977 Query: 429 ---ISLGVKQLAEDPFNN-WVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEAS 484 I L K + N+ + K G + G V V + ++ ++ + + + Sbjct: 978 NVLIELSAKPSSLAGVNHATIKDVKVGDSIVGFVNNVSKDIMWLTVSPSLKAKIDFFDLA 1037 Query: 485 RDRVE---DATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDA 530 + + +G + K +D+ +S+S R D KD Sbjct: 1038 DENSQLGHGIEDSFPLGCALRTKVVSIDQDRNTLSVSARTHDIKGIKDI 1086 Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 95/577 (16%), Positives = 195/577 (33%), Gaps = 55/577 (9%) Query: 20 PGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQ----FKNAQGELEIQVGDEVDVALD-- 73 PG V + + V+ + + Q + +++ + +G V + Sbjct: 337 PGQAVDFLCQKKTSNGVIGKVFGLVDGFLNISQQAIFYTDSKSDQAYPIGSNTRVRIIAS 396 Query: 74 -AVEDGFGETLLSREKAKRHEAWITLEKAYEDAETV-----TGVINGKVKGGFTVELNG- 126 + G +LS + A T + +A V + G+ F ++LN Sbjct: 397 LKNKSGDKFVILSDLPSVLSLASETSGNSALEAFPVGYTFENCEVKGRDSQYFYLKLNKD 456 Query: 127 IRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLL 186 + S + G E+ +V+ D ++ + + Sbjct: 457 FLGRVHLSKTGEQ------EPSG-EVSARVLGYDSFDGYYQLATDPKVIAVEYLRPI--- 506 Query: 187 ENLQEGMEVKGI-VKNLTDYGAFVDLGG--VDGLLHITDMAWKRVKHPSEIVNVGDEITV 243 ++ G V G + ++D G + + G + ++ R+ +P +G ++ Sbjct: 507 -DIPVGTIVPGCEITEVSDKGIKLSIFGGQFKATVPPLHISDIRLVYPERKFKIGSKVKG 565 Query: 244 KVLKFDRERTRVSLGLKQLGED----------PWVAIAKRYPEGTKLTGRVTNLTDYGCF 293 ++ ER ++ + LK+ + + I K +KL V GC Sbjct: 566 ILIN-ATERGQLFMSLKKSLVNLDREETELASSFEDIEKIASSDSKLAATVDIFKPNGCI 624 Query: 294 VEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP 353 V G+ G + S + P + +G V V VL ++E+ R+ + K Sbjct: 625 VSFLNGLRGFLPNSNISEAY-VKRPQDHLRLGQTVIVKVLQHNKEQNRVIVTCKVSSEAA 683 Query: 354 WQQFAETHN--KG-DRVEGKIKSITDFGIFIG-LDGGIDGLVHLSDISWNVAGEEA--VR 407 Q N G ++ + T I + + G+ G+V++ +S + + ++ Sbjct: 684 SLQREAIENMIVGRSIIKVAVVEKTKDSIVVEQVGTGLRGVVYVGHLSDSRVEQNRAQLK 743 Query: 408 EYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAI--------VTGKVT 459 + K G E+ +V+ D +L K+ + + G V Sbjct: 744 KLKIGSELEGLVIDKDERTRVFNLSCKKSLMKDAEKSLLPLNYQDVKQRGNHSPFNGYVK 803 Query: 460 AVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSV 519 +V KG V G + S A R + V V A D N LS Sbjct: 804 SVSEKGVFVAFNGQFVGLVLPSYAVDSRDVSLSSKFYVNQSVSAFLLRTDDDNERFLLSF 863 Query: 520 RAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAAKG 556 + + +EK + +++ N + ++ E + A G Sbjct: 864 K--EPKNEKSSKTPESERPAINPVDQSIKEVSEFALG 898 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 91/576 (15%), Positives = 190/576 (32%), Gaps = 45/576 (7%) Query: 12 SLKEIETRPGSIVRGVVVAIDKDVVLVDAG-LKSESAIPAEQFKNAQGELEIQVGDEVDV 70 L E + ++ V +I+ ++D G I ++ ++ G Sbjct: 247 QLIEEDLARNCTIQCAVKSIEDHGAILDVGMDGITGFISKKECESLP---NFAPGTVFLA 303 Query: 71 ALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNG-IRA 129 + + K + I+ A + V + K G ++ G + Sbjct: 304 NVAKKSGRTVTVNFEFKNKKSKVSQISSVDAVIPGQAVDFLCQKKTSNGVIGKVFGLVDG 363 Query: 130 FLPGSLVDVRPVR---DTLHLEGKELEFKVI----KLDQKRNNVVVSRRAVIESENSAER 182 FL S + D + G ++I + ++ +V+ + Sbjct: 364 FLNISQQAIFYTDSKSDQAYPIGSNTRVRIIASLKNKSGDKFVILSDLPSVLSLASETSG 423 Query: 183 DQLLENLQEGMEVK-GIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDE 240 + LE G + VK ++ L G +H++ + E Sbjct: 424 NSALEAFPVGYTFENCEVKGRDSQYFYLKLNKDFLGRVHLSKTGEQEPSG---------E 474 Query: 241 ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTG-RVTNLTDYGCFVEIEEG 299 ++ +VL +D L P GT + G +T ++D G + I G Sbjct: 475 VSARVLGYDSFDGYYQLATDPKVIAVEYLRPIDIPVGTIVPGCEITEVSDKGIKLSIFGG 534 Query: 300 V-EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN------ 352 + V + P + +G V+ ++++ ER ++ + LK+ N Sbjct: 535 QFKATVPPLHISDIRLVY-PERKFKIGSKVKGILINA-TERGQLFMSLKKSLVNLDREET 592 Query: 353 ----PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVRE 408 ++ + + ++ + G + G+ G + S+IS + Sbjct: 593 ELASSFEDIEKIASSDSKLAATVDIFKPNGCIVSFLNGLRGFLPNSNISEAYV-KRPQDH 651 Query: 409 YKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNW--VALNKKG-AIVTGKVTAVDAKG 465 + G + VLQ + E+ R+ + K +E + G +I+ V Sbjct: 652 LRLGQTVIVKVLQHNKEQNRVIVTCKVSSEAASLQREAIENMIVGRSIIKVAVVEKTKDS 711 Query: 466 ATVE-LADGVEGYLRASEASRDRVEDAT---LVLSVGDEVEAKFTGVDRKNRAISLSVRA 521 VE + G+ G + S RVE L +G E+E D + R +LS + Sbjct: 712 IVVEQVGTGLRGVVYVGHLSDSRVEQNRAQLKKLKIGSELEGLVIDKDERTRVFNLSCKK 771 Query: 522 KDEADEKDAIATVNKQEDANFSNNAMAEAFKAAKGE 557 D + ++ +N Q+ N++ + + E Sbjct: 772 SLMKDAEKSLLPLNYQDVKQRGNHSPFNGYVKSVSE 807 Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 88/620 (14%), Positives = 181/620 (29%), Gaps = 95/620 (15%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA-------------- 56 + L G++V G + ++K + V + Sbjct: 111 DHLTFRNLPVGTLVLGRISKVNKHDLCVALSDNLCGFVTLPNISEPFTKLLEDIDESMES 170 Query: 57 ----------------------------------QGELEIQVGDEVDVALDA---VEDGF 79 G + ++ + ++ Sbjct: 171 DKEASDDESDAEYDNDDDDQKSSQAQAAKLKDLPDLNNFFTQGQWLRCSVHSNSALDKNS 230 Query: 80 GETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN--GIRAFLPGSLVD 137 + + +E+ T+ + G +++ GI F+ S + Sbjct: 231 KKQKRIELSIEPSATNQLIEEDLARNCTIQCAVKSIEDHGAILDVGMDGITGFI--SKKE 288 Query: 138 VRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKG 197 + + G V K + V + ++ + ++ + G V Sbjct: 289 CESLPNFAP--GTVFLANVAKKSGRTVTVNFEFK---NKKSKVSQISSVDAVIPGQAVDF 343 Query: 198 IVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSE-IVNVGDEITVKVLKFDRER--- 252 + + T G + G VDG L+I+ A S+ +G V+++ + + Sbjct: 344 LCQKKTSNGVIGKVFGLVDGFLNISQQAIFYTDSKSDQAYPIGSNTRVRIIASLKNKSGD 403 Query: 253 TRVSLG-----LKQLGEDPWVAIAKRYPEGTKLT-GRVTNLTDYGCFVEIEEGVEGLVHV 306 V L L E + + +P G V ++++ + G VH+ Sbjct: 404 KFVILSDLPSVLSLASETSGNSALEAFPVGYTFENCEVKGRDSQYFYLKLNKDFLGRVHL 463 Query: 307 SEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDR 366 S+ + V VL D L G Sbjct: 464 SKTGEQEPSG----------EVSARVLGYDSFDGYYQLATDPKVIAVEYLRPIDIPVGTI 513 Query: 367 VEG-KIKSITDFGIFIGLDGGI-DGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDA 424 V G +I ++D GI + + GG V IS R++K G ++ +++ Sbjct: 514 VPGCEITEVSDKGIKLSIFGGQFKATVPPLHISDIRLV-YPERKFKIGSKVKGILINA-T 571 Query: 425 ERERISLGVK------QLAEDPFNNWVALNKK----GAIVTGKVTAVDAKGATVELADGV 474 ER ++ + +K E + +K + + V G V +G+ Sbjct: 572 ERGQLFMSLKKSLVNLDREETELASSFEDIEKIASSDSKLAATVDIFKPNGCIVSFLNGL 631 Query: 475 EGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATV 534 G+L S S V+ L +G V K +++ + ++ + EA A Sbjct: 632 RGFLPNSNISEAYVKRPQDHLRLGQTVIVKVLQHNKEQNRVIVTCKVSSEAASLQREAIE 691 Query: 535 NKQEDANFSNNAMAEAFKAA 554 N + A+ E K + Sbjct: 692 NMIVGRSIIKVAVVEKTKDS 711 Score = 82.3 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 26/190 (13%), Positives = 65/190 (34%), Gaps = 9/190 (4%) Query: 14 KEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL---EIQVGDEVDV 70 + + G +VRG+V I + + + ++ +P + ++ + + V Sbjct: 1171 THEDLKRGDVVRGLVKKITEKGIFIYLSSTLQAFVPVSKLTDSFIKDWRKFFKPMQSVVG 1230 Query: 71 ALDAVEDGFGE-TLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN---G 126 + +D L + + + E G + G V+L+ Sbjct: 1231 KVVNCDDDSHILVTLKESEVNGELRILKSYNDIKVGEIFEGAVKNVTDFGLFVKLDNTVN 1290 Query: 127 IRAFLPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQ 184 + + V V D + G +++ V+K++ + + + +A E++ + Sbjct: 1291 VTGLAHKTEVADSAVGDLASIFGVGDKVKAIVLKVNPDKKQLSLGLKASYFKESNENQAS 1350 Query: 185 LLENLQEGME 194 EG E Sbjct: 1351 DDAEGDEGSE 1360 >UniRef50_A8PVH2 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS 7966 RepID=A8PVH2_MALGO Length = 1217 Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 90/557 (16%), Positives = 202/557 (36%), Gaps = 48/557 (8%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQ 57 M+ + L +E ++ E G +VR + + + V + + F + Sbjct: 519 MSMRASVLSKEFMRVSEVPIGQVVRVSIRKVTPKAIFVRMNGNVDGVVFPMHFSDVRLTH 578 Query: 58 GELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETV--TGVINGK 115 E + + E+ + + +L+ +++ L K + V V+ + Sbjct: 579 PEKKYKPNLELKARIIHTDPMRNRIVLTLKRSLITSDLPLLAKLEDVRVGVVTNAVVLKQ 638 Query: 116 VKGGFTVELNG-IRAFLPGSLVDV----RPVRDTLHLEGKELEFKVIKLDQKRNNVVVSR 170 + VEL G +RA +P + L+ GK ++ ++ K + + ++ S Sbjct: 639 LPASMLVELGGTLRAVVPFAEASDTAMTSEQLGELNPTGKVVKVRITKFEPETGRIMASM 698 Query: 171 RAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG--GVDGLLHITDMAWKRV 228 + + + ++ + G V D A + L G LL + D++ +R Sbjct: 699 KQA---SSVYLQRLNVDAVDVGERVAARFAGWQDDVAILVLEPSGTRALLSLHDLSRQRR 755 Query: 229 KHPSEI---VNVGDEI-TVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRV 284 ++ + + + + V K + + V L +K G + RV Sbjct: 756 VDADKVRASLAANELLSDLYVAKKNAVKGYVVLS------YESPDASKTVEVGGRYEARV 809 Query: 285 TNLTD---YGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRR 341 Y + +H +E + N VGD +VL + ++RR Sbjct: 810 VETHHDKLYSLVSLLGTPCRARLHATECSDSLANATLPD---VGDQCTCIVLSVRKKRRE 866 Query: 342 ISLGLKQCK-----------ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGL 390 + ++ + +P G + G +K++T+ G+++ L D Sbjct: 867 ADVSIRPSRLAPSDDVNASVDDPVVDSTAQLEIGMHIRGLVKAVTNHGVYVSLGPHTDAR 926 Query: 391 VHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAED---PFNNWVAL 447 V + ++ ++ +++ G + +LQ++ +I L +K+ + P + Sbjct: 927 VMIKELFDEYV-KDFRTKFQVGQCVRGTILQIEP-NGQIELSLKKSRLEGVKPSAGAWSK 984 Query: 448 NKKGAIVTGKVTAVDAKGATVELAD-GVEGYLRASEASRDRVEDATLVLSVGDEVEAKFT 506 +G V V + G +++ V G SE S ++ +A +VGD V+A Sbjct: 985 IHEGEKVKAHVRGITEYGIFLQVDGTDVSGLCHKSELSDNKSANAIRAFAVGDRVKAVVL 1044 Query: 507 GVDRKNRAISLSVRAKD 523 +D R ++ ++ Sbjct: 1045 KMDADKRRVAFGLKPSY 1061 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 89/520 (17%), Positives = 173/520 (33%), Gaps = 42/520 (8%) Query: 8 LFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSE--SAIPAEQFKNAQGELEIQVG 65 + E ++ + PG ++ V + + +D G+ + +P + + ++V Sbjct: 251 IVNEGIRASDLSPGYVLSAAVQSPEDYGYTLDLGINDDVHGFLPTKDRLRVGSVVLVEV- 309 Query: 66 DEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN 125 +V+ L+ + A V +I V G +V+L Sbjct: 310 -------SSVDGRAVRCQLATSGEPAPVTTAPSQSAMLPGVPVRALITSHVPQGLSVKLF 362 Query: 126 GI-RAFLPGSLVDVRPVRDTLHL-EGKELEFKVIK-------------LDQKRNNVV--- 167 G+ + V D L GK++ +V+ +D + Sbjct: 363 GMWDGTVDSFHVPRGLAHDDAALAPGKKIMARVLWNMPADYEQAQEASIDAVGARRIGLS 422 Query: 168 -VSRRAVIESENSAERDQLLENLQEGMEVKGIVKNL-TDYGAFVDLGGVD--GLLHITDM 223 VS +E+ ++A L GM+++ V+ + ++G ++ G D +HI+ + Sbjct: 423 CVSHVVSLETPSAAGSVPLTHAFPIGMQLRVRVQAVFREWGLVCEVPGQDIPAFVHISSV 482 Query: 224 AWKRVKHPSEI---VNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKL 280 + + + S VG E +V + + ++ P G + Sbjct: 483 SDEHIDTLSATSGPWRVGTEHEARVTGHALTDCLLMMSMRASVLSKEFMRVSEVPIGQVV 542 Query: 281 TGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERR 340 + +T FV + V+G+V + HP K ++ ++ D R Sbjct: 543 RVSIRKVTPKAIFVRMNGNVDGVVFPMHFSD-VRLTHPEKKYKPNLELKARIIHTDPMRN 601 Query: 341 RISLGLKQ---CKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDIS 397 RI L LK+ P E G + + + L G + +V ++ S Sbjct: 602 RIVLTLKRSLITSDLPLLAKLEDVRVGVVTNAVVLKQLPASMLVELGGTLRAVVPFAEAS 661 Query: 398 WNVAGEEAVREYKK-GDEIAAVVLQVDAERERISLGVKQLAEDPFNN-WVALNKKGAIVT 455 E + E G + + + + E RI +KQ + V G V Sbjct: 662 DTAMTSEQLGELNPTGKVVKVRITKFEPETGRIMASMKQASSVYLQRLNVDAVDVGERVA 721 Query: 456 GKVTAVDAKGATVELAD-GVEGYLRASEASRDRVEDATLV 494 + A + L G L + SR R DA V Sbjct: 722 ARFAGWQDDVAILVLEPSGTRALLSLHDLSRQRRVDADKV 761 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 82/575 (14%), Positives = 162/575 (28%), Gaps = 79/575 (13%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQGELEIQVGDE 67 E L PG+ V G ++AI ++V + + +P + + + ++ Sbjct: 111 ELLNYKRLLPGTKVFGTILAIHPLALVVSICDQLLAHVPVTSVSKRLTDRLQSALDEEEK 170 Query: 68 VDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGI 127 + + E + + + L + + + V + G Sbjct: 171 DEESDGEDIHETEEDEEEEGEDRDDSSPPELHEIFSVGQWVRASVESVTAAG-------- 222 Query: 128 RAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLE 187 S R+ E + + Sbjct: 223 ------SKRQWGMGREGGEYERESQRV-----------------QLTMEPTIVNEGIRAS 259 Query: 188 NLQEGMEVKGIVKNLTDYGAFVDLG---GVDGLLHITD-MAWKRVKHPSEIVNVGDEITV 243 +L G + V++ DYG +DLG V G L D + V G + Sbjct: 260 DLSPGYVLSAAVQSPEDYGYTLDLGINDDVHGFLPTKDRLRVGSVVLVEVSSVDGRAVRC 319 Query: 244 KVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGL 303 ++ + G + +T+ G V++ +G Sbjct: 320 QLA-----------TSGEPAPVTTAPSQSAMLPGVPVRALITSHVPQGLSVKLFGMWDGT 368 Query: 304 VHVSEMDWTNKNIHPSKVVNVGDVVEVMVL-------------DIDE-ERRRISLG---- 345 V + H + G + VL ID RRI L Sbjct: 369 VDSFHV--PRGLAHDDAALAPGKKIMARVLWNMPADYEQAQEASIDAVGARRIGLSCVSH 426 Query: 346 ---LKQCKANPWQQFAETHNKGDRVEGKIKSIT-DFGIFIGLDG-GIDGLVHLSDISWNV 400 L+ A G ++ +++++ ++G+ + G I VH+S +S Sbjct: 427 VVSLETPSAAGSVPLTHAFPIGMQLRVRVQAVFREWGLVCEVPGQDIPAFVHISSVSDEH 486 Query: 401 A--GEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKV 458 ++ G E A V + + ++ V+ G +V + Sbjct: 487 IDTLSATSGPWRVGTEHEARVTGHALTDCLLMMSMRASVLSKEFMRVSEVPIGQVVRVSI 546 Query: 459 TAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLS 518 V K V + V+G + S R+ E++A+ D I L+ Sbjct: 547 RKVTPKAIFVRMNGNVDGVVFPMHFSDVRLTHPEKKYKPNLELKARIIHTDPMRNRIVLT 606 Query: 519 VRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKA 553 ++ + +A + ED A K Sbjct: 607 LKRSLITSDLPLLAKL---EDVRVGVVTNAVVLKQ 638 >UniRef50_UPI0001983EAA PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera RepID=UPI0001983EAA Length = 1821 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 87/518 (16%), Positives = 175/518 (33%), Gaps = 46/518 (8%) Query: 20 PGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQ----FKNAQGELEIQVGDEVDVALDAV 75 PG +V V + ++ V++ + F ++ + + +V+ + + Sbjct: 259 PGMMVNARVQSTFENGVMLSFLTYFTGTVDIFHLQTTFPSSNWKDDYNQNKKVNARILFI 318 Query: 76 EDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG-GFTVELNGIRAFLPGS 134 + L+ + +G G +E+ A P Sbjct: 319 DPSTRAVGLTLNP-HLVNNKAPPCPVKTGDIYDHSKVIRVDRGLGLLLEVPSTPASTPTY 377 Query: 135 LVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGME 194 + EG + +++ + + +A +++ GM Sbjct: 378 ---------VTYKEGSHVRVRILGFRNLEGLAMGTLKASAFE----GSVFTHSDVKPGMV 424 Query: 195 VKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERT 253 VK V + +GA V GV L + M+ + P + VG E+ +VL + Sbjct: 425 VKAKVIAVDSFGAIVQFPSGVKALCPLRHMSEFDIVKPRKKFKVGAELIFRVLGC--KSK 482 Query: 254 RVSLGLKQLGEDPWVAIAKRYP---EGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMD 310 R+++ K+ + I Y EG G +T + +GCF+ GV+G SE+ Sbjct: 483 RITVTHKKTLLKSKLGIISSYTDATEGLITHGWITKIEKHGCFIRFYNGVQGFAPSSELG 542 Query: 311 WTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGK 370 + S + +VG VV+ V RRI+L + G V G Sbjct: 543 LE-PGCNTSLMYHVGQVVKCRVKGSVPASRRINL-------------NDMVKLGSVVGGV 588 Query: 371 IKSITDFGIFIGLD--GGIDGLVHLSDISWNVAGEEA-VREYKKGDEIAAVVLQVDAERE 427 + +T I + + G + G + ++ + K G E +L +D E Sbjct: 589 VDRVTPHAIIVNVSAKGYLKGTISTEHLADHQGHAALMKSTLKPGYEFD-QLLVLDVEGN 647 Query: 428 RISLGVKQ---LAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEAS 484 L K + + ++V G + + G V + G+ ++ Sbjct: 648 NFILSAKYSLINSAQQLPLDLTQIHPNSVVHGYICNIIETGCFVRFLGRLTGFSPRNKVM 707 Query: 485 RDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAK 522 D+ + +G V + V+ + I+LS++ Sbjct: 708 DDQRAVPSEAFFIGQSVRSNILDVNSETGRITLSLKQS 745 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 95/573 (16%), Positives = 206/573 (35%), Gaps = 61/573 (10%) Query: 13 LKEIETRPGSIVRGVVVAIDKDVVLVDAG--LKSESAIPAEQF-KNAQGELEIQVGDEVD 69 E +P V +V + ++ +++ + + + + G V Sbjct: 872 EAYKELQPHQTVNAIVEIVKENYLVLSLPEYNYAIGYASVSDYNTQKFAQKQFLHGQSVI 931 Query: 70 VALDAVEDGF--GETLLSREKAKR-----HEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 ++ A+ G LL + + +Y V I + Sbjct: 932 ASVMALPSPSTVGRLLLVLKSVSEATETSSSKRAKKKSSYNVGSLVQAEITEIKPLELRL 991 Query: 123 ELN-GIRAFLPGSLVDVRPVRDT---LHLEGKELEFKVI------KLDQKRNNVVVSRRA 172 + G + + V V + G+ + +++ + + K + +S + Sbjct: 992 KFGIGFHGRVHITEVCDENVIENPFSNFRIGQTVSARIVAKANKSENNGKNHQWELSIKP 1051 Query: 173 VIESENSAERDQLLE---NLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMA--WK 226 + + + ++L++ + G V G V + + ++ + + L + D + Sbjct: 1052 EMLTGSIEVENKLVDAEFRISTGQRVTGYVYKVENEWIWLTISRHIKAQLFLLDTSCEPN 1111 Query: 227 RVKHPSEIVNVGDEITVKVLKFDRERTRVSLGL------------KQLGE------DPWV 268 ++ + VG ++ VL ++E+ + + L K L P Sbjct: 1112 ELQEFQKRFEVGKAVSGYVLSANKEKKLLRMVLHQFSVSNGTLDGKVLNIDNQHCNPPIE 1171 Query: 269 AIAKRYPEGTKLTGRVTNLTDY--GCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGD 326 + +G L GR++ + G V+I + G VH +E+ + P + G Sbjct: 1172 NLIPHIHKGDTLGGRISKILPGVGGLLVQIGPHLYGKVHFTELKDSW-VSDPLSGYHEGQ 1230 Query: 327 VVEVMVLDIDEERR---RISLGL-----KQCKANPWQQFAETHNKGDRVEGKIKSITDFG 378 V+ VL+I + + L L N + + + V+G +K++T G Sbjct: 1231 FVKCKVLEIGHSEKGTVHVDLSLWSSLNGMHSPNSRVEKIDNLHSDMLVQGYVKNVTSKG 1290 Query: 379 IFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLA- 437 FI L +D + L+++S + RE+ G ++ VL V+ R+ + +K + Sbjct: 1291 CFILLSRKLDARILLANLSDGYVEK-PEREFPIGKLVSGRVLSVEPLSRRVEVTLKTSSA 1349 Query: 438 ---EDPFNNWVALNKKGAIVTGKVTAVDAKGATVELAD-GVEGYLRASEASRDRVEDATL 493 + N + G I+ G + V++ G + + D + G SE S D + + Sbjct: 1350 TSVQKSEVNDFSSILVGDIIFGTIKRVESYGLFITIDDTNMVGLCHISELSDDHISNIET 1409 Query: 494 VLSVGDEVEAKFTGVDRKNRAISLSVRAKDEAD 526 G+ V AK VD + ISL ++ + Sbjct: 1410 KYKAGERVAAKILKVDEERHRISLGMKNSYIKE 1442 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 83/519 (15%), Positives = 169/519 (32%), Gaps = 72/519 (13%) Query: 9 FEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEV 68 F + PG + GVV +++ + + + A + + EI+V + Sbjct: 119 FANKITLKNISPGMKLWGVVAEVNEKDLGISLPGGLRGLVRASEAFDPLFSNEIKV---L 175 Query: 69 DVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN--G 126 + ++ED G+ + Sbjct: 176 TAYVKSIED----------------------------------------HGYILHFGLPS 195 Query: 127 IRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVV--SRRAVIESENSAERDQ 184 FLP S + ++ G+ L+ + +D+ V + + + + Sbjct: 196 FTGFLPKS---SQADQNIEINTGQILQGVIRSIDKAHKVVYLSSDPDTISKCVTKDLKGI 252 Query: 185 LLENLQEGMEVKGIVKNLTDYGAFVD-LGGVDGLLHITDM-AWKRVKHPSEIVNVGDEIT 242 ++ L GM V V++ + G + L G + I + + + N ++ Sbjct: 253 SIDLLIPGMMVNARVQSTFENGVMLSFLTYFTGTVDIFHLQTTFPSSNWKDDYNQNKKVN 312 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLT-GRVTNLTDYGCFVEIEEGVE 301 ++L D V L L + G +V + D G + +E Sbjct: 313 ARILFIDPSTRAVGLTLNPHLVNNKAPPC-PVKTGDIYDHSKVIRV-DRGLGLLLE---- 366 Query: 302 GLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETH 361 V + G V V +L LK Sbjct: 367 --VPSTPASTPTYVT-----YKEGSHVRVRILGFRNLEGLAMGTLKASAFEGSVFTHSDV 419 Query: 362 NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQ 421 G V+ K+ ++ FG + G+ L L +S + +++K G E+ VL Sbjct: 420 KPGMVVKAKVIAVDSFGAIVQFPSGVKALCPLRHMSEFDIVK-PRKKFKVGAELIFRVLG 478 Query: 422 VDAERERISLGVKQLAEDPFNNWVALN---KKGAIVTGKVTAVDAKGATVELADGVEGYL 478 + +RI++ K+ ++ +G I G +T ++ G + +GV+G+ Sbjct: 479 C--KSKRITVTHKKTLLKSKLGIISSYTDATEGLITHGWITKIEKHGCFIRFYNGVQGFA 536 Query: 479 RASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISL 517 +SE + + +L+ VG V+ + G +R I+L Sbjct: 537 PSSELGLEPGCNTSLMYHVGQVVKCRVKGSVPASRRINL 575 Score = 177 bits (450), Expect = 9e-43, Method: Composition-based stats. Identities = 103/583 (17%), Positives = 195/583 (33%), Gaps = 91/583 (15%) Query: 6 AQLFEES-LKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ---GELE 61 A FE S + +PG +V+ V+A+D +V ++ P + Sbjct: 406 ASAFEGSVFTHSDVKPGMVVKAKVIAVDSFGAIVQFPSGVKALCPLRHMSEFDIVKPRKK 465 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 +VG E+ + + + K I+ + G I K G Sbjct: 466 FKVGAELIFRVLGCKSKRITVTHKKTLLKSKLGIISSYTDATEGLITHGWITKIEKHGCF 525 Query: 122 VEL-NGIRAFLPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 + NG++ F P S + + P +T + G+ ++ +V + ++ Sbjct: 526 IRFYNGVQGFAPSSELGLEPGCNTSLMYHVGQVVKCRVKGSVPASRRINLN--------- 576 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL---GGVDGLLHITDMAW--KRVKHPSE 233 + ++ G V G+V +T + V++ G + G + +A Sbjct: 577 --------DMVKLGSVVGGVVDRVTPHAIIVNVSAKGYLKGTISTEHLADHQGHAALMKS 628 Query: 234 IVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIA---KRYPEGTKLTGRVTNLTDY 290 + G E ++L D E L K + + + + + G + N+ + Sbjct: 629 TLKPGYEFD-QLLVLDVEGNNFILSAKYSLINSAQQLPLDLTQIHPNSVVHGYICNIIET 687 Query: 291 GCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC- 349 GCFV + G +++ + + PS+ +G V +LD++ E RI+L LKQ Sbjct: 688 GCFVRFLGRLTGFSPRNKVMDDQRAV-PSEAFFIGQSVRSNILDVNSETGRITLSLKQSC 746 Query: 350 --------------------------KANPWQQFAETHNKGDRVEGKIKSITDFGIFIGL 383 + ++AE N G +EGKI DFG+ I Sbjct: 747 CSSTDASFIQEYFLLEEKIAKLQLSDSEHSELKWAEGFNIGTVIEGKIHDAKDFGVVISF 806 Query: 384 D--GGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPF 441 + + G + ++ G + AVVL V + L +K D Sbjct: 807 EKYNDVFGFITHYQLTAER-----------GSTVQAVVLDVAKTERLVDLSLKPEFLDRH 855 Query: 442 NNWVALNKKG---------------AIVTGKVTAVDAKGATVELADGVEGYLRASEASRD 486 + ++ G V V V + L + AS + + Sbjct: 856 KEDSSNSQAGKKKRRREAYKELQPHQTVNAIVEIVKENYLVLSLPEYNYAIGYASVSDYN 915 Query: 487 RVEDATLVLSVGDEVEAKFTGVDRKN--RAISLSVRAKDEADE 527 + A G V A + + + L +++ EA E Sbjct: 916 TQKFAQKQFLHGQSVIASVMALPSPSTVGRLLLVLKSVSEATE 958 Score = 67.3 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 44/292 (15%), Positives = 78/292 (26%), Gaps = 57/292 (19%) Query: 261 QLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDW--------- 311 +L K G KL G V + + + + G+ GLV SE Sbjct: 115 KLPRFANKITLKNISPGMKLWGVVAEVNEKDLGISLPGGLRGLVRASEAFDPLFSNEIKV 174 Query: 312 -TNKNIHPSK--------------------------VVNVGDVVEVMVLDIDEERRRISL 344 T +N G +++ ++ ID+ + + L Sbjct: 175 LTAYVKSIEDHGYILHFGLPSFTGFLPKSSQADQNIEINTGQILQGVIRSIDKAHKVVYL 234 Query: 345 GLK------QCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISW 398 + + G V +++S + G+ + G V + + Sbjct: 235 SSDPDTISKCVTKDLKGISIDLLIPGMMVNARVQSTFENGVMLSFLTYFTGTVDIFHLQT 294 Query: 399 NVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIV-TGK 457 +Y + ++ A +L +D + L + K G I K Sbjct: 295 TFPSSNWKDDYNQNKKVNARILFIDPSTRAVGLTL-NPHLVNNKAPPCPVKTGDIYDHSK 353 Query: 458 VTAVDAKGATVELADGVEGYLRASEASRDRVEDATLV-LSVGDEVEAKFTGV 508 V VD G E T V G V + G Sbjct: 354 VIRVD------------RGLGLLLEVPSTPASTPTYVTYKEGSHVRVRILGF 393 Score = 59.2 bits (142), Expect = 4e-07, Method: Composition-based stats. Identities = 10/91 (10%), Positives = 27/91 (29%), Gaps = 4/91 (4%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGL-KSESAIPAEQFKN---AQGELEIQVGD 66 E G I+ G + ++ + + + + + E + + G+ Sbjct: 1356 EVNDFSSILVGDIIFGTIKRVESYGLFITIDDTNMVGLCHISELSDDHISNIETKYKAGE 1415 Query: 67 EVDVALDAVEDGFGETLLSREKAKRHEAWIT 97 V + V++ L + + E Sbjct: 1416 RVAAKILKVDEERHRISLGMKNSYIKETTQN 1446 Score = 45.7 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 24/139 (17%), Positives = 55/139 (39%), Gaps = 14/139 (10%) Query: 383 LDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISL--GVKQLAEDP 440 GI G + A + ++ G ++ VV +V+ + ISL G++ L Sbjct: 108 FGDGITGKLPR------FANKITLKNISPGMKLWGVVAEVNEKDLGISLPGGLRGLVRAS 161 Query: 441 FNNWVALNKKGAIVTGKVTAVDAKGATVELA-DGVEGYLRASEASRDRVEDATLVLSVGD 499 + + ++T V +++ G + G+L S + +E ++ G Sbjct: 162 EAFDPLFSNEIKVLTAYVKSIEDHGYILHFGLPSFTGFLPKSSQADQNIE-----INTGQ 216 Query: 500 EVEAKFTGVDRKNRAISLS 518 ++ +D+ ++ + LS Sbjct: 217 ILQGVIRSIDKAHKVVYLS 235 >UniRef50_Q4PGT5 Putative uncharacterized protein n=1 Tax=Ustilago maydis RepID=Q4PGT5_USTMA Length = 1563 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 87/541 (16%), Positives = 186/541 (34%), Gaps = 54/541 (9%) Query: 33 KDVVLVDAGLKSESAIPAEQFKNAQ---GELEIQVGDEVDVALDAVEDGFGETLLSREKA 89 + + + + + + F + + E + G V + V+ +L+ +K+ Sbjct: 600 PNAIFLQLQGHVDGVVFSNHFADVKLTQPEKRYKPGLSVKARVMDVDPNRNRIVLTLKKS 659 Query: 90 KRHEAWITLEKAYEDAETV--TGVINGKVKGGFTVE-LNGIRAFLPGSLVDVRPVRDTLH 146 + + V + V G++A +PG V D Sbjct: 660 LVKSDLPIVASMQDARIGVVTNATVFRVQTNSLIVSLFGGLKALVPGREVSENDFNDVKS 719 Query: 147 --LEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTD 204 EGK ++ ++ ++D + VV S + + + +E G +V G V + Sbjct: 720 SFTEGKVIKIRITEVDYENQKVVGSIKQTLPEYLAKLNVDAVE---VGDKVTGKVAAVHK 776 Query: 205 YGAFVDL--GGVDGLLHITDMAWKR---VKHPSEIVNVGDEIT-VKVLKFDRERTRVSL- 257 + L GV LL ++ +A R + E + EI + V + + V + Sbjct: 777 EVVVLTLVPTGVRALLSLSVLASMRNTTSQELLESLEEDQEIEDLVVSAKNPAKGIVIVA 836 Query: 258 ----GLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDY--GCFVEIEEGVEGLVHVSEMDW 311 K + + + + +G + GRV D C V + +HV+++ Sbjct: 837 DKVRSSKSEDVENNGSTSGQVKQGNVVQGRVIQKNDKYLDCVVALGTATRATLHVTDLAD 896 Query: 312 TNKNIHPSKVVNVGDVVEVMVLD---------IDEERRRISLGLKQCKANPWQQFAETHN 362 + + G ++ ++ I R++ +P Sbjct: 897 DF--SRNVSLPSPGQTLQCYIVSLKSNGKSAVISTRPSRVAASDSAEVTDPEISSISDLA 954 Query: 363 KGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQV 422 KG +V G +K+IT+ G+F+ + +D V + ++ + + G ++ ++ Sbjct: 955 KGQKVRGFVKAITNVGLFVTVGRKLDARVQVRELFDEFV-RDWKTRFTVGQVVSGTIMDT 1013 Query: 423 DAERERISLGVKQL-----------------AEDPFNNWVALNKKGAIVTGKVTAVDAKG 465 + I + +K +A K G V G V + G Sbjct: 1014 NVHNNEIEMSLKSTPGSIKPRAERAEERALLDAKKRPKRLADFKVGDKVKGFVKNIIGFG 1073 Query: 466 ATVELAD-GVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDE 524 V++ V G +E S + ++A VGD+V A ++ + + IS ++ Sbjct: 1074 VFVQIEGTNVSGLAHMNELSDGKADEALKAFRVGDKVRAIVLRINEEKKKISFGLKPSYF 1133 Query: 525 A 525 Sbjct: 1134 D 1134 Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 79/571 (13%), Positives = 194/571 (33%), Gaps = 43/571 (7%) Query: 10 EESLKEIETRPGSIVRGVVVA-IDKDVVLVDA-GLKSESAIPAEQFKNAQGEL------E 61 ++ L + G+I++ VV I+ ++V + Q + Sbjct: 485 DQQLLQHAYPIGAILKVTVVQTINDWGLVVSVHDTDLRGFVHISQVSDDHVVSLPPSSGP 544 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 + LS + + ++ + + +I + Sbjct: 545 FAKETVHKARVVGHSPTDRTLQLSLKASVLERKFMRVSEVEVGEVVTANIIKLGLPNAIF 604 Query: 122 VELNG-IRAFLPGSLVDVRPV--RDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 ++L G + + + + + + G ++ +V+ +D RN +V++ + + ++ Sbjct: 605 LQLQGHVDGVVFSNHFADVKLTQPEKRYKPGLSVKARVMDVDPNRNRIVLTLKKSL-VKS 663 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNV 237 +++ + G+ V + V L GG+ L+ +++ Sbjct: 664 DLPIVASMQDARIGVVTNATVFRVQTNSLIVSLFGGLKALVPGREVSENDFNDVKSSFTE 723 Query: 238 GDEITVKVLKFDRERTRVSLGLKQLGE-DPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI 296 G I +++ + D E +V +KQ G K+TG+V + + + Sbjct: 724 GKVIKIRITEVDYENQKVVGSIKQTLPEYLAKLNVDAVEVGDKVTGKVAAVHKEVVVLTL 783 Query: 297 EE-GVEGLVHVSEMDWTNKN--IHPSKVVNVGDVVEVMVLDI-DEERRRISL-----GLK 347 GV L+ +S + + + +E +V+ + + + + K Sbjct: 784 VPTGVRALLSLSVLASMRNTTSQELLESLEEDQEIEDLVVSAKNPAKGIVIVADKVRSSK 843 Query: 348 QCKANPWQQFAETHNKGDRVEGKIKSITDFGI--FIGLDGGIDGLVHLSDISWNVAGEEA 405 + +G+ V+G++ D + + L +H++D++ + + Sbjct: 844 SEDVENNGSTSGQVKQGNVVQGRVIQKNDKYLDCVVALGTATRATLHVTDLADDFSRN-- 901 Query: 406 VREYKKGDEIAAVVLQVDAERERISLGVKQLA---------EDPFNNWVALNKKGAIVTG 456 V G + ++ + + + + + DP + ++ KG V G Sbjct: 902 VSLPSPGQTLQCYIVSLKSNGKSAVISTRPSRVAASDSAEVTDPEISSISDLAKGQKVRG 961 Query: 457 KVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAI- 515 V A+ G V + ++ ++ E + V D +VG V + N I Sbjct: 962 FVKAITNVGLFVTVGRKLDARVQVRELFDEFVRDWKTRFTVGQVVSGTIMDTNVHNNEIE 1021 Query: 516 -SL-----SVRAKDEADEKDAIATVNKQEDA 540 SL S++ + E E+ A+ K+ Sbjct: 1022 MSLKSTPGSIKPRAERAEERALLDAKKRPKR 1052 Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats. Identities = 92/529 (17%), Positives = 175/529 (33%), Gaps = 66/529 (12%) Query: 56 AQGELEIQVGDEVDVALDAV-----------------EDGFGETLLSREKAKRHEAWITL 98 + VG + ++ V E LS + Sbjct: 230 PELSELFHVGQWLVASVVQVHSGDVAKGRPTREGGEYEKESRRVELSLSPHLVNTGVSIS 289 Query: 99 EKAYEDAETVTGVINGKVKGGFTVE-----LNGIRAF-----LPGSLVDVRPVRDTLHLE 148 + + +++ I+ G+ ++ G F LP S + + Sbjct: 290 D--LDVGASLSATISSVEDHGYMLDSGIPEFRGFVGFSDVARLPASFHAGKNGKSLE--V 345 Query: 149 GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAF 208 G + K+ K+ + + + + S + + + + G K +V G Sbjct: 346 GSVVFAKITKIPESKRSFEATLDPKTVSTSPIKHTPSITAILPGTLTKVLVTAALPTGLN 405 Query: 209 VDLGG-VDGLL---HITDMAWKRVKHPSEIVNVGDEITVKVL-------------KFDRE 251 V L G D + H+ ++ K S++ G + +VL Sbjct: 406 VKLFGMFDATIDRFHLPELPQG--KDISDVYKEGSKHVARVLWDLLSPPSTALQSDIPEH 463 Query: 252 RTRVSLGL-------KQLGEDPWVAIAKRYPEGTKLTGRVTN-LTDYGCFVEI-EEGVEG 302 ++ L L + + YP G L V + D+G V + + + G Sbjct: 464 ERKLGLSLAPQVLALEAPVAKDQQLLQHAYPIGAILKVTVVQTINDWGLVVSVHDTDLRG 523 Query: 303 LVHVSEMDWTNKNIHP--SKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAET 360 VH+S++ + P S V + V+ R + L LK Sbjct: 524 FVHISQVSDDHVVSLPPSSGPFAKETVHKARVVGHSPTDRTLQLSLKASVLERKFMRVSE 583 Query: 361 HNKGDRVEGKIKSI-TDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVV 419 G+ V I + IF+ L G +DG+V + + V + + YK G + A V Sbjct: 584 VEVGEVVTANIIKLGLPNAIFLQLQGHVDGVVFSNHFAD-VKLTQPEKRYKPGLSVKARV 642 Query: 420 LQVDAERERISLGVKQ---LAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEG 476 + VD R RI L +K+ ++ P + + G + V V V L G++ Sbjct: 643 MDVDPNRNRIVLTLKKSLVKSDLPIVASMQDARIGVVTNATVFRVQTNSLIVSLFGGLKA 702 Query: 477 YLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEA 525 + E S + D + G ++ + T VD +N+ + S++ Sbjct: 703 LVPGREVSENDFNDVKSSFTEGKVIKIRITEVDYENQKVVGSIKQTLPE 751 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 61/346 (17%), Positives = 117/346 (33%), Gaps = 51/346 (14%) Query: 227 RVKHPSEIVNVGDEITVKVLKF-----------------DRERTRVSLGLKQLGEDPWVA 269 +V SE+ +VG + V++ ++E RV L L + V+ Sbjct: 228 KVPELSELFHVGQWLVASVVQVHSGDVAKGRPTREGGEYEKESRRVELSLSPHLVNTGVS 287 Query: 270 IAKRYPEGTKLTGRVTNLTDYGCFVEIE-EGVEGLVHVSEMDWTNKNIHPSKV---VNVG 325 I+ G L+ ++++ D+G ++ G V S++ + H K + VG Sbjct: 288 IS-DLDVGASLSATISSVEDHGYMLDSGIPEFRGFVGFSDVARLPASFHAGKNGKSLEVG 346 Query: 326 DVVEVMVLDIDEERRRISLGLKQCK----ANPWQQFAETHNKGDRVEGKIKSITDFGIFI 381 VV + I E +R L G + + + G+ + Sbjct: 347 SVVFAKITKIPESKRSFEATLDPKTVSTSPIKHTPSITAILPGTLTKVLVTAALPTGLNV 406 Query: 382 GLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL-------------QVDAERER 428 L G D + + G++ YK+G + A VL + + Sbjct: 407 KLFGMFDATIDRFHLPELPQGKDISDVYKEGSKHVARVLWDLLSPPSTALQSDIPEHERK 466 Query: 429 ISLGVKQ-------LAEDPFNNWVALNKKGAIVTGKVTA-VDAKGATVELAD-GVEGYLR 479 + L + GAI+ V ++ G V + D + G++ Sbjct: 467 LGLSLAPQVLALEAPVAKDQQLLQHAYPIGAILKVTVVQTINDWGLVVSVHDTDLRGFVH 526 Query: 480 ASEASRDRVEDA---TLVLSVGDEVEAKFTGVDRKNRAISLSVRAK 522 S+ S D V + + +A+ G +R + LS++A Sbjct: 527 ISQVSDDHVVSLPPSSGPFAKETVHKARVVGHSPTDRTLQLSLKAS 572 >UniRef50_A5N6D1 30S ribosomal protein S1 n=2 Tax=Clostridium kluyveri RepID=A5N6D1_CLOK5 Length = 314 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 102/277 (36%), Positives = 168/277 (60%), Gaps = 1/277 (0%) Query: 76 EDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSL 135 D + W LE +++ + VI VKGG +L+G+RAF+P S Sbjct: 4 NDQTNSVDGIINETDMESVWSKLENEFKNEDIFEVVIKELVKGGLIADLHGLRAFIPASH 63 Query: 136 VDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEV 195 + V+ D GK L+ K+I+LD+ +N +V+S + V + E +L + +G ++ Sbjct: 64 ISVKYTDDLKEFIGKTLKVKLIQLDKSKNKIVLSGKEVEKLELEEMSKKLWSTISKGDKI 123 Query: 196 KGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRV 255 +G V +T++G FVDLGGV+GL+HI++++WK++K PSE+V+VGD++ V VL +++R R+ Sbjct: 124 EGRVSRITNFGVFVDLGGVEGLVHISELSWKKIKDPSEVVSVGDKLKVYVLNLNQDRNRI 183 Query: 256 SLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKN 315 SL +K+ PW I K+Y + G V+ + + G F+EIE G+EGLVH+SE+ + Sbjct: 184 SLSIKRTLNSPWENIGKKYKSNDIVDGIVSKVINIGAFIEIEPGIEGLVHISEISQEH-I 242 Query: 316 IHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN 352 P +V+ VGD V+V +L+IDE+ RISL +K+ + Sbjct: 243 TTPEEVLRVGDKVKVKILNIDEKASRISLSIKEAQDK 279 Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats. Identities = 76/295 (25%), Positives = 139/295 (47%), Gaps = 11/295 (3%) Query: 267 WVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGD 326 W + + + L G ++ G+ + S + K +G Sbjct: 23 WSKLENEFKNEDIFEVVIKELVKGGLIADL-HGLRAFIPASHISVKY--TDDLKEF-IGK 78 Query: 327 VVEVMVLDIDEERRRISLGLKQCKANPWQQF----AETHNKGDRVEGKIKSITDFGIFIG 382 ++V ++ +D+ + +I L K+ + ++ T +KGD++EG++ IT+FG+F+ Sbjct: 79 TLKVKLIQLDKSKNKIVLSGKEVEKLELEEMSKKLWSTISKGDKIEGRVSRITNFGVFVD 138 Query: 383 LDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFN 442 L GG++GLVH+S++SW ++ GD++ VL ++ +R RISL +K+ P+ Sbjct: 139 L-GGVEGLVHISELSWKKI-KDPSEVVSVGDKLKVYVLNLNQDRNRISLSIKRTLNSPWE 196 Query: 443 NWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVE 502 N K IV G V+ V GA +E+ G+EG + SE S++ + VL VGD+V+ Sbjct: 197 NIGKKYKSNDIVDGIVSKVINIGAFIEIEPGIEGLVHISEISQEHITTPEEVLRVGDKVK 256 Query: 503 AKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAAKGE 557 K +D K ISLS++ + + D + + + FK + Sbjct: 257 VKILNIDEKASRISLSIKEA-QDKFSPNFKEYKEYLDKDSDKITLGDLFKDKLKD 310 Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats. Identities = 60/278 (21%), Positives = 130/278 (46%), Gaps = 12/278 (4%) Query: 15 EIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQ-VGDEVDVALD 73 E E + I V+ + K ++ D + IPA + + +G + V L Sbjct: 27 ENEFKNEDIFEVVIKELVKGGLIADL-HGLRAFIPASHISVKYTDDLKEFIGKTLKVKLI 85 Query: 74 AVEDGFGETLLSREKAKRHEAWITLEKAYE---DAETVTGVINGKVKGGFTVELNGIRAF 130 ++ + +LS ++ ++ E +K + + + G ++ G V+L G+ Sbjct: 86 QLDKSKNKIVLSGKEVEKLELEEMSKKLWSTISKGDKIEGRVSRITNFGVFVDLGGVEGL 145 Query: 131 LPGSLVDVRPVRDTLHLE--GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLEN 188 + S + + ++D + G +L+ V+ L+Q RN + +S + + S + N Sbjct: 146 VHISELSWKKIKDPSEVVSVGDKLKVYVLNLNQDRNRISLSIKRTLNSPWENIGKKYKSN 205 Query: 189 LQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLK 247 V GIV + + GAF+++ G++GL+HI++++ + + P E++ VGD++ VK+L Sbjct: 206 ----DIVDGIVSKVINIGAFIEIEPGIEGLVHISEISQEHITTPEEVLRVGDKVKVKILN 261 Query: 248 FDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVT 285 D + +R+SL +K+ + + K + ++T Sbjct: 262 IDEKASRISLSIKEAQDKFSPNFKEYKEYLDKDSDKIT 299 >UniRef50_C5XCN3 Putative uncharacterized protein Sb02g006000 n=1 Tax=Sorghum bicolor RepID=C5XCN3_SORBI Length = 1862 Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats. Identities = 85/530 (16%), Positives = 184/530 (34%), Gaps = 49/530 (9%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQG----ELEIQVGD 66 + L PG +V V ++ ++ V++ + N+ + + Sbjct: 294 KGLSIDHLIPGMMVNARVHSVLENGVMLSFLTYFSGTVDIFNLLNSFPSGNWKDDYSKNK 353 Query: 67 EVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG-GFTVELN 125 +V+ + V+ L+ K H + + K G +E+ Sbjct: 354 KVNARILFVDPSTRAVGLTLNKHLLHLEVPPI-NLKAGDIYDKSKVLRVDKKAGLFLEIP 412 Query: 126 G---IRAFLPGSLVDVRPVRDTLHLE-GKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 F+ V + ++ + G L +++ + + + + Sbjct: 413 SPTPSPGFISIHDVSDKDAKNLEKFKEGSSLRVRILGVRNLEGVAIGTVKDSAFE----G 468 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAW-KRVKHPSEIVNVGD 239 ++++ GM V+ V + +GA V GV L + M+ + V P + VG Sbjct: 469 SVFTHDDVKPGMLVRAKVATVEPFGAIVQFSSGVKALCPLPHMSELEHVVKPPKKFKVGA 528 Query: 240 EITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRY---PEGTKLTGRVTNLTDYGCFVEI 296 E+ +VL + RV++ K+ + + Y G G +T + +GCFV+ Sbjct: 529 ELLFRVLGC--KSKRVTVTYKKSLVKSKLDVLASYADAKIGLVTHGWITKIEKHGCFVKF 586 Query: 297 EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQ 356 GV+G V S++ V +VG VV+ ++++ R++++ Sbjct: 587 YNGVQGFVSRSDLGLEA-GTEAENVYHVGQVVKCRIINVIPASRKLNVSFVISHNR--VI 643 Query: 357 FAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIA 416 +T G V G ++ +T + + ++G G + ++ + Sbjct: 644 PIDTPKLGSIVSGVVERLTPAAVVVSVNGFSKGTILNEHLADHH---------------- 687 Query: 417 AVVLQVDAERERISLGVKQLAED---PFNNWVALNKKGAIVTGKVTAVDAKGATVELADG 473 D E + L K + + ++ G +V G + + G V Sbjct: 688 ------DIEGHNLVLSAKHSLINCANDIPSEISQMHPGVVVHGYICNIIESGCFVRFLGH 741 Query: 474 VEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKD 523 + G+ +A R+E + VG V + V + + LS++ Sbjct: 742 LTGFSPKDKAVDRRIERLSDAFYVGQSVRSHILSVTAETARVKLSLQQSM 791 Score = 214 bits (544), Expect = 9e-54, Method: Composition-based stats. Identities = 93/475 (19%), Positives = 186/475 (39%), Gaps = 53/475 (11%) Query: 14 KEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQF----KNAQGELEIQVGDEVD 69 K+ + GS+V ++ I +L+ G I + + ++++G ++ Sbjct: 1003 KKSGYKIGSLVEAEIIDIKPLELLLQFGGNLHGRIHITEVPEKDSDEHPFSKLRIGQKLT 1062 Query: 70 VALDAVEDGFGE----------TLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGG 119 + A + G+ + E E+ + E V + K Sbjct: 1063 ARIVAEAEPSGKSGKNFKWELSIRPCIVNGEFDELTAQKEQKHTTNEIVRAYVVKVDKEW 1122 Query: 120 FTVELN-GIRA--FLPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVV-----S 169 + ++ + A F+ S + +++ EG+ ++ +VI +++++ + + Sbjct: 1123 VWLTVSRNVMAHLFVLDSSSEPSELKEFQQRFSEGQAVKGRVINVNREKRLLRLKALDNQ 1182 Query: 170 RRAVIESENSAERDQLLENLQEGMEVKGIVKNLTD--YGAFVDLG-GVDGLLHITDMAWK 226 + E + + E ++G + G V+ + G V +G + G +H T++ Sbjct: 1183 CTQLNIDEIQQSKSSVFEQTKQGDIIGGRVQKILPGVGGLVVQIGPHLRGRVHYTEIVDS 1242 Query: 227 RVKHPSEIVNVGDEITVKVLKFDRERT---RVSLGLKQ----------------LGEDPW 267 V P + G + KVL R RV L L+ Sbjct: 1243 WVTEPLSGFHEGQFVKCKVLSVSRSSEGSLRVDLSLRSSNLIRDSNNSGLVDDLATCTSR 1302 Query: 268 VAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDV 327 + K GT++ G V N+ GCF+ I VE + +S + +P K VG + Sbjct: 1303 IEKIKDLLPGTEIKGYVKNVNSKGCFIMISRMVEARITLSNLSDEY-VENPQKDFPVGML 1361 Query: 328 VEVMVLDIDEERRRISLGLKQCK----ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGL 383 V VL D R+ L++ + GD ++G++K + FG+F+ + Sbjct: 1362 VHGRVLSTDPSSGRVEASLRKTTGSKLEKLDDISYSDLHVGDIIDGQVKRVESFGLFVTI 1421 Query: 384 DG-GIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLA 437 + GL H+S++S + YK GD + A +L++D +R R+SLG+K+ Sbjct: 1422 RRSELVGLCHVSELSDEPVV-DINSCYKAGDMVKAKILKIDEKRHRVSLGMKKSY 1475 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 95/598 (15%), Positives = 198/598 (33%), Gaps = 67/598 (11%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAG--LKSESAIPAEQF-KNAQGELEIQVGDE 67 + + V VV I +++ + P + G Sbjct: 906 QRAAVADLELHEEVNAVVEIIKGSYLVLSIPEYNYAIGFAPLMDYNSQLLPHHHYDNGQR 965 Query: 68 VDVAL--DAVEDGFGETLL-----SREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 + V + D G +L ++ A + Y+ V I Sbjct: 966 ITVVVGNIPSSDSSGRLILLPKASAQYSALSESKRAKKKSGYKIGSLVEAEIIDIKPLEL 1025 Query: 121 TVELNG-IRAFLPGSLVDVRPVRDT---LHLEGKELEFKVIKLDQKRNNVVVSRRAVI-- 174 ++ G + + + V + + G++L +++ + + + + Sbjct: 1026 LLQFGGNLHGRIHITEVPEKDSDEHPFSKLRIGQKLTARIVAEAEPSGKSGKNFKWELSI 1085 Query: 175 -----ESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKR- 227 E Q + V+ V + ++ + V L + D + + Sbjct: 1086 RPCIVNGEFDELTAQKEQKHTTNEIVRAYVVKVDKEWVWLTVSRNVMAHLFVLDSSSEPS 1145 Query: 228 -VKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLG-----------EDPWVAIAKRYP 275 +K + + G + +V+ +RE+ + L K L + ++ ++ Sbjct: 1146 ELKEFQQRFSEGQAVKGRVINVNREKRLLRL--KALDNQCTQLNIDEIQQSKSSVFEQTK 1203 Query: 276 EGTKLTGRVTNLTDY--GCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVL 333 +G + GRV + G V+I + G VH +E+ + P + G V+ VL Sbjct: 1204 QGDIIGGRVQKILPGVGGLVVQIGPHLRGRVHYTEIVDSW-VTEPLSGFHEGQFVKCKVL 1262 Query: 334 DIDEERR---RISLGLKQ----------------CKANPWQQFAETHNKGDRVEGKIKSI 374 + R+ L L+ + + G ++G +K++ Sbjct: 1263 SVSRSSEGSLRVDLSLRSSNLIRDSNNSGLVDDLATCTSRIEKIKDLLPGTEIKGYVKNV 1322 Query: 375 TDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVK 434 G FI + ++ + LS++S E +++ G + VL D R+ ++ Sbjct: 1323 NSKGCFIMISRMVEARITLSNLSDEYV-ENPQKDFPVGMLVHGRVLSTDPSSGRVEASLR 1381 Query: 435 QLA----EDPFNNWVALNKKGAIVTGKVTAVDAKGATVELAD-GVEGYLRASEASRDRVE 489 + E + + G I+ G+V V++ G V + + G SE S + V Sbjct: 1382 KTTGSKLEKLDDISYSDLHVGDIIDGQVKRVESFGLFVTIRRSELVGLCHVSELSDEPVV 1441 Query: 490 DATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAM 547 D GD V+AK +D K +SL ++ D A N ED + + Sbjct: 1442 DINSCYKAGDMVKAKILKIDEKRHRVSLGMKKSYFD--SDLTADTNDDEDDESALMDI 1497 Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 82/529 (15%), Positives = 183/529 (34%), Gaps = 54/529 (10%) Query: 13 LKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL------------ 60 + P + GVV+ +++ +++ + +E + + Sbjct: 137 ITVKNISPNMKLWGVVIEVNQKDIVLSLPGGIRGFVRSEDVCDIALQENRKDSENSLCAK 196 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 + VG V + V+D E + + + G+ Sbjct: 197 VVHVGQLVPCIVLRVDDDKKE-----------------------GKVLAAQVKSIEDHGY 233 Query: 121 TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVI--ESEN 178 + G+ +F D + + + V +D+ R V +S + +S Sbjct: 234 ILHF-GVSSFSGFMQKDDKENVKIERR--QLMHCVVKAIDKTRAIVHLSSDEDLLCKSII 290 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVD-LGGVDGLLHITDMAWKRV-KHPSEIVN 236 + +++L GM V V ++ + G + L G + I ++ + + + Sbjct: 291 KDLKGLSIDHLIPGMMVNARVHSVLENGVMLSFLTYFSGTVDIFNLLNSFPSGNWKDDYS 350 Query: 237 VGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLT-GRVTNLTDY-GCFV 294 ++ ++L D V L L + G +V + G F+ Sbjct: 351 KNKKVNARILFVDPSTRAVGLTLNKHL-LHLEVPPINLKAGDIYDKSKVLRVDKKAGLFL 409 Query: 295 EIEEGVE--GLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN 352 EI G + + ++ K+ + G + V +L + +K Sbjct: 410 EIPSPTPSPGFISIHDVSD--KDAKNLEKFKEGSSLRVRILGVRNLEGVAIGTVKDSAFE 467 Query: 353 PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKG 412 + G V K+ ++ FG + G+ L L +S + +++K G Sbjct: 468 GSVFTHDDVKPGMLVRAKVATVEPFGAIVQFSSGVKALCPLPHMSELEHVVKPPKKFKVG 527 Query: 413 DEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALN---KKGAIVTGKVTAVDAKGATVE 469 E+ VL + +R+++ K+ + +A K G + G +T ++ G V+ Sbjct: 528 AELLFRVLGC--KSKRVTVTYKKSLVKSKLDVLASYADAKIGLVTHGWITKIEKHGCFVK 585 Query: 470 LADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLS 518 +GV+G++ S+ + +A V VG V+ + V +R +++S Sbjct: 586 FYNGVQGFVSRSDLGLEAGTEAENVYHVGQVVKCRIINVIPASRKLNVS 634 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 79/494 (15%), Positives = 166/494 (33%), Gaps = 37/494 (7%) Query: 15 EIETRPGSIVRGVVVAIDKDVVLVDAGLKS-ESAIPAEQFKNAQGELEIQVGDEVDVALD 73 + + + G ++ V +I+ ++ G+ S + + +N + E + + Sbjct: 212 DDDKKEGKVLAAQVKSIEDHGYILHFGVSSFSGFMQKDDKENVKIERR----QLMHCVVK 267 Query: 74 AVEDGFGETLLSREKAKRHEAWIT-----LEKAYEDAETVTGVINGKVKGGFTVEL---- 124 A++ LS ++ ++ I V ++ ++ G + Sbjct: 268 AIDKTRAIVHLSSDEDLLCKSIIKDLKGLSIDHLIPGMMVNARVHSVLENGVMLSFLTYF 327 Query: 125 -NGIRAF-LPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 + F L S D K++ +++ +D V ++ + Sbjct: 328 SGTVDIFNLLNSFPSGNWKDDYSK--NKKVNARILFVDPSTRAVGLTLNKHLLHLEVPPI 385 Query: 183 DQLLENLQEGMEVKG-IVKNLTDY-GAFVDLGG---VDGLLHITDMAWKRVKHPSEIVNV 237 NL+ G V + G F+++ G + I D++ K K+ E Sbjct: 386 -----NLKAGDIYDKSKVLRVDKKAGLFLEIPSPTPSPGFISIHDVSDKDAKNL-EKFKE 439 Query: 238 GDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE 297 G + V++L +K + V G + +V + +G V+ Sbjct: 440 GSSLRVRILGVRNLEGVAIGTVKDSAFEGSVFTHDDVKPGMLVRAKVATVEPFGAIVQFS 499 Query: 298 EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQF 357 GV+ L + M + P K VG + VL + +R+++ K+ Sbjct: 500 SGVKALCPLPHMSELEHVVKPPKKFKVGAELLFRVLGC--KSKRVTVTYKKSLVKSKLDV 557 Query: 358 AETH---NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDE 414 ++ G G I I G F+ G+ G V SD+ AG EA Y G Sbjct: 558 LASYADAKIGLVTHGWITKIEKHGCFVKFYNGVQGFVSRSDLGLE-AGTEAENVYHVGQV 616 Query: 415 IAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGV 474 + ++ V ++++ + + K G+IV+G V + V + Sbjct: 617 VKCRIINVIPASRKLNVS--FVISHNRVIPIDTPKLGSIVSGVVERLTPAAVVVSVNGFS 674 Query: 475 EGYLRASEASRDRV 488 +G + + Sbjct: 675 KGTILNEHLADHHD 688 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 91/585 (15%), Positives = 181/585 (30%), Gaps = 87/585 (14%) Query: 13 LKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ----GELEIQVGDEV 68 + +PG +VR V ++ +V ++ P + + +VG E+ Sbjct: 471 FTHDDVKPGMLVRAKVATVEPFGAIVQFSSGVKALCPLPHMSELEHVVKPPKKFKVGAEL 530 Query: 69 DVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL-NGI 127 + + + K + + G I K G V+ NG+ Sbjct: 531 LFRVLGCKSKRVTVTYKKSLVKSKLDVLASYADAKIGLVTHGWITKIEKHGCFVKFYNGV 590 Query: 128 RAFLPGSLVDVR--PVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQL 185 + F+ S + + + ++ G+ ++ ++I + + SR+ + S R Sbjct: 591 QGFVSRSDLGLEAGTEAENVYHVGQVVKCRIINV------IPASRKLNVSFVISHNRVIP 644 Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 ++ + G V G+V+ LT V + G G + +A Sbjct: 645 IDTPKLGSIVSGVVERLTPAAVVVSVNGFSKGTILNEHLADHH----------------- 687 Query: 245 VLKFDRERTRVSLGLKQLGEDPWVAIAKRY---PEGTKLTGRVTNLTDYGCFVEIEEGVE 301 D E + L K + I G + G + N+ + GCFV + Sbjct: 688 ----DIEGHNLVLSAKHSLINCANDIPSEISQMHPGVVVHGYICNIIESGCFVRFLGHLT 743 Query: 302 GLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQ------------- 348 G + + S VG V +L + E R+ L L+Q Sbjct: 744 GFSPK-DKAVDRRIERLSDAFYVGQSVRSHILSVTAETARVKLSLQQSMCSSTDSSFIQG 802 Query: 349 ---------CKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGID--GLVHLSDIS 397 +A T G VEG++ +I ++GI + +D GL+ + Sbjct: 803 YFLLDQKIAALKYSSNDWAHTFGIGSLVEGEVGAIEEYGIILNFKDHLDVVGLIEHHQLG 862 Query: 398 WNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGK 457 + + G + +VL D ++L +K N K+ Sbjct: 863 GSSV--------EVGSSVKGLVL--DLSDGVVNLSLKPELIGSVRNVGKKKKRQRAAVAD 912 Query: 458 VTAVDAKGATVELADGVEGYLRASE----------ASRDRVEDATLVLSVGDEVEAKFTG 507 + + A VE+ G L E + G + Sbjct: 913 LELHEEVNAVVEIIKGSYLVLSIPEYNYAIGFAPLMDYNSQLLPHHHYDNGQRITVVVGN 972 Query: 508 V--DRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEA 550 + + + L +A A + ++ + + ++ EA Sbjct: 973 IPSSDSSGRLILLPKAS--AQYSALSESKRAKKKSGYKIGSLVEA 1015 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 84/574 (14%), Positives = 190/574 (33%), Gaps = 71/574 (12%) Query: 8 LFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDE 67 EE + + V G++ V+ G + + + L ++ E Sbjct: 836 AIEEYGIILNFKDHLDVVGLIEHHQLGGSSVEVGSSVKGLVL--DLSDGVVNLSLKP--E 891 Query: 68 VDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV----E 123 + ++ V E E V V+ +KG + V E Sbjct: 892 LIGSVRNVGKKKKR-------------QRAAVADLELHEEVNAVV-EIIKGSYLVLSIPE 937 Query: 124 LNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKV--IKLDQKRNNVVVSRRAVIESEN--S 179 N F P + + + + G+ + V I +++ +A + Sbjct: 938 YNYAIGFAPLMDYNSQLLPHHHYDNGQRITVVVGNIPSSDSSGRLILLPKASAQYSALSE 997 Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAW-KRVKHPSEIVNV 237 ++R + + G V+ + ++ + GG + G +HIT++ +HP + + Sbjct: 998 SKRAKKKSGYKIGSLVEAEIIDIKPLELLLQFGGNLHGRIHITEVPEKDSDEHPFSKLRI 1057 Query: 238 GDEITVKVLKFDRERT------RVSLGLKQLGEDPWVAIAKRYPE-----GTKLTGRVTN 286 G ++T +++ + L ++ + E + V Sbjct: 1058 GQKLTARIVAEAEPSGKSGKNFKWELSIRPCIVNGEFDELTAQKEQKHTTNEIVRAYVVK 1117 Query: 287 LTDYGCFVEIEEGVEGLVHVSEMDWT-NKNIHPSKVVNVGDVVEVMVLDIDEERRRISLG 345 + ++ + V + V + ++ + + G V+ V++++ E+R + L Sbjct: 1118 VDKEWVWLTVSRNVMAHLFVLDSSSEPSELKEFQQRFSEGQAVKGRVINVNREKRLLRLK 1177 Query: 346 LKQCK---------ANPWQQFAETHNKGDRVEGKIKSITD--FGIFIGLDGGIDGLVHLS 394 + E +GD + G+++ I G+ + + + G VH + Sbjct: 1178 ALDNQCTQLNIDEIQQSKSSVFEQTKQGDIIGGRVQKILPGVGGLVVQIGPHLRGRVHYT 1237 Query: 395 DISWNVAGEEAVREYKKGDEIAAVVLQVDAERE---RISLGVKQLAE------------- 438 +I + E + + +G + VL V E R+ L ++ Sbjct: 1238 EIVDSWVTE-PLSGFHEGQFVKCKVLSVSRSSEGSLRVDLSLRSSNLIRDSNNSGLVDDL 1296 Query: 439 ---DPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVL 495 + G + G V V++KG + ++ VE + S S + VE+ Sbjct: 1297 ATCTSRIEKIKDLLPGTEIKGYVKNVNSKGCFIMISRMVEARITLSNLSDEYVENPQKDF 1356 Query: 496 SVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKD 529 VG V + D + + S+R + + Sbjct: 1357 PVGMLVHGRVLSTDPSSGRVEASLRKTTGSKLEK 1390 Score = 82.3 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 28/183 (15%), Positives = 64/183 (34%), Gaps = 10/183 (5%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQ 57 + + A K + PG+ ++G V ++ + E+ I + Sbjct: 1292 LVDDLATCTSRIEKIKDLLPGTEIKGYVKNVNSKGCFIMISRMVEARITLSNLSDEYVEN 1351 Query: 58 GELEIQVGDEVDVALDAVEDGFGET--LLSREKAKRHEAWITLEKA-YEDAETVTGVING 114 + + VG V + + + G L + + E + + + + G + Sbjct: 1352 PQKDFPVGMLVHGRVLSTDPSSGRVEASLRKTTGSKLEKLDDISYSDLHVGDIIDGQVKR 1411 Query: 115 KVKGGFTVEL--NGIRAFLPGSLVDVRPVRDTLH--LEGKELEFKVIKLDQKRNNVVVSR 170 G V + + + S + PV D G ++ K++K+D+KR+ V + Sbjct: 1412 VESFGLFVTIRRSELVGLCHVSELSDEPVVDINSCYKAGDMVKAKILKIDEKRHRVSLGM 1471 Query: 171 RAV 173 + Sbjct: 1472 KKS 1474 Score = 74.2 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 49/276 (17%), Positives = 91/276 (32%), Gaps = 48/276 (17%) Query: 261 QLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDW--------T 312 +L K KL G V + + + G+ G V ++ Sbjct: 129 KLPRYANRITVKNISPNMKLWGVVIEVNQKDIVLSLPGGIRGFVRSEDVCDIALQENRKD 188 Query: 313 NKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIK 372 ++N +KVV+VG +V +VL +D+++ +G + ++K Sbjct: 189 SENSLCAKVVHVGQLVPCIVLRVDDDK----------------------KEGKVLAAQVK 226 Query: 373 SITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKG--DEIAAVVLQVDAERERIS 430 SI D G + +S S ++ K + VV +D R + Sbjct: 227 SIEDHGYILHFG--------VSSFS-GFMQKDDKENVKIERRQLMHCVVKAIDKTRAIVH 277 Query: 431 LG------VKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEAS 484 L K + +D + G +V +V +V G + G + Sbjct: 278 LSSDEDLLCKSIIKDLKGLSIDHLIPGMMVNARVHSVLENGVMLSFLTYFSGTVDIFNLL 337 Query: 485 RDRVE-DATLVLSVGDEVEAKFTGVDRKNRAISLSV 519 + S +V A+ VD RA+ L++ Sbjct: 338 NSFPSGNWKDDYSKNKKVNARILFVDPSTRAVGLTL 373 >UniRef50_C1ECK5 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1ECK5_9CHLO Length = 2018 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 111/552 (20%), Positives = 193/552 (34%), Gaps = 53/552 (9%) Query: 15 EIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQF------KNAQGELEIQVGDEV 68 PG +V V A+ D + ++ + + A + G+ V Sbjct: 301 MSTLLPGMLVNARVKAVLADGLQMNFMTYFTATVDAFHVGGGVHGAAPDPAAAHKTGERV 360 Query: 69 DVALDAVEDGFGETLLSREKAKRHEAWITLEKAY-EDAETVTGVINGKVKG--GFTVELN 125 + V+ L+ A + + +V G +EL Sbjct: 361 RARVLYVDAAAKRVGLTLRPHLVTLEASVRAGAMPKPGTIFETAVVRRVDTAIGVLLELK 420 Query: 126 G-------IRAFLPGSLVDVRPVRDTLH--LEGKELEFKVIKLDQKRNNVVVSRRAVIES 176 + S + GK++ +VI + VS ++ + Sbjct: 421 SENENVHPTFGYCHISDAADEHLDKLEKRFKVGKKVRARVIGSRAMDSVATVSCKSTV-- 478 Query: 177 ENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIV 235 + LE L GM+V+G V + YGA V L GV L ++ + + V Sbjct: 479 --LDQPFLSLEELVPGMQVRGEVVAVEPYGAVVKLAPGVKALCPPNHISDIPGRVTNAKV 536 Query: 236 NVGDEITVKVLKFDRERTRVSLGLKQLG---EDPWVAIAKRYPEGTKLTGRVTNLTDYGC 292 G +V+ DR + R + K+ E P VA GT G VT + YG Sbjct: 537 KEGLSAKFRVVSVDRVKGRAVVTHKKQLIRSELPVVASLDDATPGTTTHGVVTGVEPYGV 596 Query: 293 FVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN 352 FV++ + GL + ++ + P + VG VV V+ D ++I L L A Sbjct: 597 FVQLYGNLRGLAGLQDLGLAA-DQTPQEAFAVGQVVRATVIRSDRGEQKIKLSLAPGGAV 655 Query: 353 PWQQFAE----------THNKGDRVE-GKIKSITD--FGIFIGLDGGIDGLVHLSDISWN 399 + G VE +K + + + + L GG+ G+V + +S + Sbjct: 656 ANGNDLDGTPGEKGDVGAPEPGTVVESATVKRVDEATGNVQVTLPGGVPGVVTAAQMSDH 715 Query: 400 V-AGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPF-----NNWVALNKKGAI 453 G + + GDEI ++ ++A+ R L K + ++ GAI Sbjct: 716 PLTGAGLSQAFAPGDEI-GPLVALEAKPRRSILSRKASLVEAARGGTLPEDISGVVVGAI 774 Query: 454 VTGKVTAVDAK-GATVELADGVEGYLRASEASRDRVE---DATLVLSVGDEVEAKFTGVD 509 G V + A G V + G S+ + V D + ++G V A+ VD Sbjct: 775 YPGYVASATANAGVFVRFLGRLTGLAPPSQLTDVPVAGGVDPEEMFALGQTVLARVVSVD 834 Query: 510 R--KNRAISLSV 519 + +SLS+ Sbjct: 835 ATVEPPRLSLSL 846 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 106/588 (18%), Positives = 177/588 (30%), Gaps = 91/588 (15%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN------------AQG 58 E LK R G V GVV ++ + V + + + + G Sbjct: 74 ELLKYKNLRVGMKVLGVVTEVNDRGLTVSLPNGLKGTVTRAEASDVLAPASKRGKKGPDG 133 Query: 59 ELE--------------------------IQVGDEVDVALDAVEDGF---GETLLSREKA 89 + QVG + + + G LS + Sbjct: 134 DDPSEASESESESEEEDEDEDERLDLTSMFQVGQILRCKVRQLGKGKSGGKRIDLSTRLS 193 Query: 90 KRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN---GIRAFLPGSLVDVRPVRDTLH 146 + + D V +N G+ + FLP V + Sbjct: 194 QVCSNIS--GHSLTDGMAVPACVNSVEDHGYVLSFGCSDSPTGFLPRKSCPQSLVDTLVR 251 Query: 147 LEGKELEFKVIKLDQKR------------NNVVVSRRAVIESENSAERDQLLENLQEGME 194 G L+ + + K + V ++ + L GM Sbjct: 252 --GSILDVVIAGDEGKDGKRARSKGPGGVMQCTADPKRVAQAVTHEGDGAAMSTLLPGML 309 Query: 195 VKGIVKNLTDYG----------AFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 V VK + G A VD V G +H P+ G+ + + Sbjct: 310 VNARVKAVLADGLQMNFMTYFTATVDAFHVGGGVH------GAAPDPAAAHKTGERVRAR 363 Query: 245 VLKFDRERTRVSLGLKQ--LGEDPWVAIAKRYPEGTKLTGRVTNLTD--YGCFVEIEEGV 300 VL D RV L L+ + + V GT V D G +E++ Sbjct: 364 VLYVDAAAKRVGLTLRPHLVTLEASVRAGAMPKPGTIFETAVVRRVDTAIGVLLELKSEN 423 Query: 301 E------GLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPW 354 E G H+S+ + + K VG V V+ ++ K + Sbjct: 424 ENVHPTFGYCHISDAADEHLD-KLEKRFKVGKKVRARVIGSRAMDSVATVSCKSTVLDQP 482 Query: 355 QQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDE 414 E G +V G++ ++ +G + L G+ L + IS + G + K+G Sbjct: 483 FLSLEELVPGMQVRGEVVAVEPYGAVVKLAPGVKALCPPNHISD-IPGRVTNAKVKEGLS 541 Query: 415 IAAVVLQVDAERERISLGVKQL---AEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELA 471 V+ VD + R + K+ +E P + G G VT V+ G V+L Sbjct: 542 AKFRVVSVDRVKGRAVVTHKKQLIRSELPVVASLDDATPGTTTHGVVTGVEPYGVFVQLY 601 Query: 472 DGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSV 519 + G + + +VG V A DR + I LS+ Sbjct: 602 GNLRGLAGLQDLGLAADQTPQEAFAVGQVVRATVIRSDRGEQKIKLSL 649 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 104/560 (18%), Positives = 194/560 (34%), Gaps = 58/560 (10%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESA------IPAEQFKNAQGE-LEIQVGDEVD 69 + GS V V + + ++ + + +F + E VG +V Sbjct: 1010 KLEIGSKVTAEVELVKPEYAVLSLPDHGGAIAYASVNLLNRRFNEDEVETERFAVGRKVT 1069 Query: 70 VALD----AVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL- 124 + + G L A A + GV+ + L Sbjct: 1070 AFVAGNAASGSPGDRLLLTVPAAKSNKGAGSGEASAVGAGLAMEGVVKEVQSMQAILTLP 1129 Query: 125 NGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIK-LDQKRNNVVVSRRAVIESENSAERD 183 NG + L + + G L + + N + ++ R +E R Sbjct: 1130 NGRKGRLHATELAEGAFPMKKIAVGATLNVVTLGPAGDRGNMLELTVRRSVEESREIARA 1189 Query: 184 QL-----------------LENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAW 225 L L EG E+ GIV ++ + + G+ + + Sbjct: 1190 ATDAGGGDGSGAGIAGTAALATLSEGDEIDGIVSAVSADTLAIAVAPGLTARVPKIETGD 1249 Query: 226 KRV---KHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTG 282 K + VG+ + + L D R ++ + L+ + + EG K+ G Sbjct: 1250 SIAALRKALTSRFTVGERVKMTALAADVARKKIIVTLRSADK-------RNVVEGAKIAG 1302 Query: 283 RVTNLTDYG--CFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERR 340 V+ + G FV++ G VHV+++ ++ P K+ +VG+ VEV VL + E Sbjct: 1303 IVSKIAPGGGGVFVQLNSRQHGRVHVTDIADDPRSE-PWKLHSVGEAVEVRVLGV-GEGG 1360 Query: 341 RISLGLKQCKANPW-----QQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSD 395 + L +K G V G +K + G F+ + +D V + + Sbjct: 1361 EVDLSMKSSALKSKGSSNGISSVSQLAPGAHVSGFVKQVNKGGCFVAISRSVDARVKMCN 1420 Query: 396 ISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPF-----NNWVALNKK 450 ++ + +E+ KG + +L VD R + ++ D + A ++ Sbjct: 1421 LADTFVS-DPAQEFPKGKLVKGTILSVDESSGRAEMTLRSDGMDAAAGRSQIDNNAHVEE 1479 Query: 451 GAIVTGKVTAVDAKGATVELAD-GVEGYLRASEASRDRVED-ATLVLSVGDEVEAKFTGV 508 G++ G V V G V L G G S + R++D + G+ V K V Sbjct: 1480 GSVQMGTVRRVQTYGVFVTLDGSGRSGLCHISMFADARIKDSLEQHVRAGERVRVKVLQV 1539 Query: 509 DRKNRAISLSVRAKDEADEK 528 D + ISL ++ AD++ Sbjct: 1540 DEETGKISLGMKPSLFADDE 1559 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 103/572 (18%), Positives = 199/572 (34%), Gaps = 77/572 (13%) Query: 15 EIETRPGSIVRGVVVAIDKDVVLVD---AGLKSESAIPAEQFKNAQGELE----IQVGDE 67 + + G ++GVV A+ + VLVD + + Q NA G+ E G++ Sbjct: 898 NEKLKVGEEIKGVVHAVREYGVLVDMPDVDPDAVGLVAFHQLPNANGDNEEPKHPAEGEK 957 Query: 68 VDVALDAVEDGFGET-------------------LLSREKAKRHEAWITLEKAYEDAETV 108 + + V G L+ + K+ +A E V Sbjct: 958 ITGRVLDVSRREGVVDIGARPSLTGAKVGKKGAKALTTAELKKRKAAQAGAHKLEIGSKV 1017 Query: 109 TGVINGKVKGGFTVEL---NGIRAFLPGSLVDVRPVRDTLHL----EGKELEFKVIK-LD 160 T + + L G A+ +L++ R D + G+++ V Sbjct: 1018 TAEVELVKPEYAVLSLPDHGGAIAYASVNLLNRRFNEDEVETERFAVGRKVTAFVAGNAA 1077 Query: 161 QKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLH 219 + N + G+ ++G+VK + A + L G G LH Sbjct: 1078 SGSPGDRLLLTVPAAKSNKGAGSGEASAVGAGLAMEGVVKEVQSMQAILTLPNGRKGRLH 1137 Query: 220 ITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTR-VSLGLKQLGEDPWVAIAK------ 272 T++A P + + VG + V L +R + L +++ E+ Sbjct: 1138 ATELAEGAF--PMKKIAVGATLNVVTLGPAGDRGNMLELTVRRSVEESREIARAATDAGG 1195 Query: 273 ---------------RYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIH 317 EG ++ G V+ ++ + + G+ V E + + Sbjct: 1196 GDGSGAGIAGTAALATLSEGDEIDGIVSAVSADTLAIAVAPGLTARVPKIETGDSIAALR 1255 Query: 318 --PSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSIT 375 + VG+ V++ L D R++I + L+ +G ++ G + I Sbjct: 1256 KALTSRFTVGERVKMTALAADVARKKIIVTLRSADKR-------NVVEGAKIAGIVSKIA 1308 Query: 376 DFG--IFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGV 433 G +F+ L+ G VH++DI+ + E + + G+ + VL V E + L + Sbjct: 1309 PGGGGVFVQLNSRQHGRVHVTDIADDPRSEPW-KLHSVGEAVEVRVLGV-GEGGEVDLSM 1366 Query: 434 KQLAEDPFNNWV-----ALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRV 488 K A + + GA V+G V V+ G V ++ V+ ++ + V Sbjct: 1367 KSSALKSKGSSNGISSVSQLAPGAHVSGFVKQVNKGGCFVAISRSVDARVKMCNLADTFV 1426 Query: 489 EDATLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 D G V+ VD + +++R Sbjct: 1427 SDPAQEFPKGKLVKGTILSVDESSGRAEMTLR 1458 Score = 160 bits (406), Expect = 1e-37, Method: Composition-based stats. Identities = 73/366 (19%), Positives = 137/366 (37%), Gaps = 22/366 (6%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE------IQVGDEVDV 70 G + G+V A+ D + + + +P + ++ L VG+ V + Sbjct: 1211 TLSEGDEIDGIVSAVSADTLAIAVAPGLTARVPKIETGDSIAALRKALTSRFTVGERVKM 1270 Query: 71 ALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIR-A 129 A + + +++ A + + A ++ G GG V+LN + Sbjct: 1271 TALAADVARKKIIVTLRSADKRNVVEGAKIAGIVSKIAPG------GGGVFVQLNSRQHG 1324 Query: 130 FLPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLE 187 + + + P + L G+ +E +V+ + + + + + ++S+ S+ + Sbjct: 1325 RVHVTDIADDPRSEPWKLHSVGEAVEVRVLGVGEGGEVDLSMKSSALKSKGSSNGISSVS 1384 Query: 188 NLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVL 246 L G V G VK + G FV + VD + + ++A V P++ G + +L Sbjct: 1385 QLAPGAHVSGFVKQVNKGGCFVAISRSVDARVKMCNLADTFVSDPAQEFPKGKLVKGTIL 1444 Query: 247 KFDRERTRVSLGLK-----QLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI-EEGV 300 D R + L+ + EG+ G V + YG FV + G Sbjct: 1445 SVDESSGRAEMTLRSDGMDAAAGRSQIDNNAHVEEGSVQMGTVRRVQTYGVFVTLDGSGR 1504 Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAET 360 GL H+S + V G+ V V VL +DEE +ISLG+K + Sbjct: 1505 SGLCHISMFADARIKDSLEQHVRAGERVRVKVLQVDEETGKISLGMKPSLFADDEMPDGD 1564 Query: 361 HNKGDR 366 G Sbjct: 1565 AGAGME 1570 Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats. Identities = 86/512 (16%), Positives = 159/512 (31%), Gaps = 74/512 (14%) Query: 102 YEDAETVTGVINGKVKGGFTVEL-NGIRAFLPGSLVDV---------RPVRDTLHL---- 147 V GV+ G TV L NG++ + + + D Sbjct: 81 LRVGMKVLGVVTEVNDRGLTVSLPNGLKGTVTRAEASDVLAPASKRGKKGPDGDDPSEAS 140 Query: 148 ------------------------EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERD 183 G+ L KV +L + R + + + Sbjct: 141 ESESESEEEDEDEDERLDLTSMFQVGQILRCKVRQL--GKGKSGGKRIDLSTRLSQVCSN 198 Query: 184 QLLENLQEGMEVKGIVKNLTDYGAFVDLGGVD---GLLHITDMAWKRVK-----HPSEIV 235 +L +GM V V ++ D+G + G D G L V ++V Sbjct: 199 ISGHSLTDGMAVPACVNSVEDHGYVLSFGCSDSPTGFLPRKSCPQSLVDTLVRGSILDVV 258 Query: 236 NVGDE----ITVK------VLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVT 285 GDE + V++ + RV+ + + + A G + RV Sbjct: 259 IAGDEGKDGKRARSKGPGGVMQCTADPKRVA---QAVTHEGDGAAMSTLLPGMLVNARVK 315 Query: 286 NLTDYGCFVEIEEGVEGLVHVSEMDWTNKNI--HPSKVVNVGDVVEVMVLDIDEERRRIS 343 + G + V + P+ G+ V VL +D +R+ Sbjct: 316 AVLADGLQMNFMTYFTATVDAFHVGGGVHGAAPDPAAAHKTGERVRARVLYVDAAAKRVG 375 Query: 344 LGLKQ--CKANPWQQFAETHNKGDRVEGKIKSITDF--GIFIGLDGGID------GLVHL 393 L L+ + G E + D G+ + L + G H+ Sbjct: 376 LTLRPHLVTLEASVRAGAMPKPGTIFETAVVRRVDTAIGVLLELKSENENVHPTFGYCHI 435 Query: 394 SDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAI 453 SD + ++ + +K G ++ A V+ A ++ K D + G Sbjct: 436 SDAADEH-LDKLEKRFKVGKKVRARVIGSRAMDSVATVSCKSTVLDQPFLSLEELVPGMQ 494 Query: 454 VTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNR 513 V G+V AV+ GA V+LA GV+ + S + G + + VDR Sbjct: 495 VRGEVVAVEPYGAVVKLAPGVKALCPPNHISDIPGRVTNAKVKEGLSAKFRVVSVDRVKG 554 Query: 514 AISLSVRAKDEADEKDAIATVNKQEDANFSNN 545 ++ + + E +A+++ ++ Sbjct: 555 RAVVTHKKQLIRSELPVVASLDDATPGTTTHG 586 Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 108/643 (16%), Positives = 203/643 (31%), Gaps = 119/643 (18%) Query: 18 TRPGSIVR-GVVVAIDK--DVVLVDAGLKSESAIPAEQFKNAQG-----ELEIQVGDEVD 69 PG++V V +D+ V V + A Q + GDE+ Sbjct: 674 PEPGTVVESATVKRVDEATGNVQVTLPGGVPGVVTAAQMSDHPLTGAGLSQAFAPGDEIG 733 Query: 70 VALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETV----TGVINGKV-KGGFTVEL 124 + A+E ++LSR+ + A V G + G V Sbjct: 734 PLV-ALEAKPRRSILSRKASLVEAARGGTLPEDISGVVVGAIYPGYVASATANAGVFVRF 792 Query: 125 NG-IRAFLPGSLVDVRPVR---DTLHL--EGKELEFKVIKLD----QKRNNVVVSRRAVI 174 G + P S + PV D + G+ + +V+ +D R ++ ++ R V Sbjct: 793 LGRLTGLAPPSQLTDVPVAGGVDPEEMFALGQTVLARVVSVDATVEPPRLSLSLAPRGVA 852 Query: 175 ----------------------------------ESENSAERDQLLENLQEGMEVKGIVK 200 E+ E L+ G E+KG+V Sbjct: 853 ASSGVTAEAPLIRSIFTDVDVADRLADERAASGGEAPEGFLTAAANEKLKVGEEIKGVVH 912 Query: 201 NLTDYGAFVDLGGVD----GLLHITDMAWKRVKHPS-EIVNVGDEITVKVLKFDRERTRV 255 + +YG VD+ VD GL+ + + + G++IT +VL R V Sbjct: 913 AVREYGVLVDMPDVDPDAVGLVAFHQLPNANGDNEEPKHPAEGEKITGRVLDVSRREGVV 972 Query: 256 -------------------SLGLKQLGEDPWVAI-AKRYPEGTKLTGRVTNLTDYGCFVE 295 +L +L + A + G+K+T V + + Sbjct: 973 DIGARPSLTGAKVGKKGAKALTTAELKKRKAAQAGAHKLEIGSKVTAEVELVKPEYAVLS 1032 Query: 296 IEEGVEGLVHVS-EMDWTNKNIH--PSKVVNVGDVVEVMVLDIDEERR---RISLGLKQC 349 + + + + S + N ++ VG V V R+ L + Sbjct: 1033 LPDHGGAIAYASVNLLNRRFNEDEVETERFAVGRKVTAFVAGNAASGSPGDRLLLTVPAA 1092 Query: 350 KANPWQQFAETHNKGDRV--EGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVR 407 K+N E G + EG +K + + L G G +H ++++ ++ Sbjct: 1093 KSNKGAGSGEASAVGAGLAMEGVVKEVQSMQAILTLPNGRKGRLHATELAEGAF---PMK 1149 Query: 408 EYKKGDEIAAVVLQVDAERER-ISLGVKQLAEDPFNNWV--------------------- 445 + G + V L +R + L V++ E+ Sbjct: 1150 KIAVGATLNVVTLGPAGDRGNMLELTVRRSVEESREIARAATDAGGGDGSGAGIAGTAAL 1209 Query: 446 ALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRD---RVEDATLVLSVGDEVE 502 A +G + G V+AV A + +A G+ + E + T +VG+ V+ Sbjct: 1210 ATLSEGDEIDGIVSAVSADTLAIAVAPGLTARVPKIETGDSIAALRKALTSRFTVGERVK 1269 Query: 503 AKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNN 545 D + I +++R+ D+ + + Sbjct: 1270 MTALAADVARKKIIVTLRSADKRNVVEGAKIAGIVSKIAPGGG 1312 Score = 67.7 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 25/181 (13%), Positives = 61/181 (33%), Gaps = 12/181 (6%) Query: 14 KEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQGELEIQVGDEVDV 70 + PG+ V G V ++K V ++ + + + E G V Sbjct: 1382 SVSQLAPGAHVSGFVKQVNKGGCFVAISRSVDARVKMCNLADTFVSDPAQEFPKGKLVKG 1441 Query: 71 ALDAVEDGFGE--TLLSREKAKRHEAWITLEK--AYEDAETVTGVINGKVKGGFTVELNG 126 + +V++ G L + ++ E+ G + G V L+G Sbjct: 1442 TILSVDESSGRAEMTLRSDGMDAAAGRSQIDNNAHVEEGSVQMGTVRRVQTYGVFVTLDG 1501 Query: 127 I--RAFLPGSLVDVRPVRD-TLHLE--GKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 S+ ++D G+ + KV+++D++ + + + + +++ Sbjct: 1502 SGRSGLCHISMFADARIKDSLEQHVRAGERVRVKVLQVDEETGKISLGMKPSLFADDEMP 1561 Query: 182 R 182 Sbjct: 1562 D 1562 >UniRef50_B2W7W2 rRNA biogenesis protein RRP5 n=1 Tax=Pyrenophora tritici-repentis Pt-1C-BFP RepID=B2W7W2_PYRTR Length = 1760 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 93/605 (15%), Positives = 194/605 (32%), Gaps = 100/605 (16%) Query: 6 AQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA---QGELEI 62 AQ + ++ + + G V G V I D + V+ G + Q + + Sbjct: 814 AQASKLAISIEDLQAGETVHGFVRGILPDKIFVELGNGISGVLFKSQLPEEMISEPNFGL 873 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETV-------------- 108 + + + V+ G G LS + ++ T++ + ET+ Sbjct: 874 RKDQSISARVTHVDVGKGFFWLSMKAESELDSANTVDPPMKAGETLVDPVDSKILTTDDI 933 Query: 109 ------TGVINGKVKGGFTVEL-NGIRAFLPGSL-------VDVRPVRDTLHLEGKELEF 154 T I VEL + ++ + S + + ++++ Sbjct: 934 KFGTLTTVRIKTVKSTQLNVELADNVQGRISVSELFDGWDSIPDKKNPTAHFKMNEKVQA 993 Query: 155 KVIKLDQ-------------KRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKN 201 +V+ V A + L+ + G V N Sbjct: 994 RVLGRHDARNFRFLPITSRSNHKTPVYEMTANTDKIKREADVLSLDKITPGSSHTAFVNN 1053 Query: 202 LTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLK 260 + D +V++ V G ++ L Sbjct: 1054 IADRYVWVNISANVRG-----------------------------------PGKLDLTA- 1077 Query: 261 QLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSK 320 + G L RVT + + V+I E + + + ++ P+K Sbjct: 1078 VSTVTGKTMSLQDIKVGYILPARVTKIHEASIVVQINEKLAAPIFLEQLADDYDMAKPNK 1137 Query: 321 VVNVGDVVEVMVLDIDEERRRISLGLKQCK--------ANPWQQFAETHNKGDRVEGKIK 372 VGDV+ V V+DID +++ L + + +P + V G IK Sbjct: 1138 -FKVGDVLRVCVIDIDIPNKKLGLSARPSRVLSSSLTVRDPEIKDKSQLKVHQVVRGFIK 1196 Query: 373 SITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLG 432 + G+++ L ++ V +S +S ++ + + ++ ++ + Sbjct: 1197 HVASNGVYVRLGPHVEAYVRVSHLSDEYI-KDWKSAFHVDQLVTGKIISNKEDQRNPQMS 1255 Query: 433 VKQLAEDPFNNW---VALNKKGAIVTGKVTAVDAKGATVELAD--GVEGYLRASEASRDR 487 +K + K G IVT KV V+ G + + + V G S+ + + Sbjct: 1256 LKTSVIQGNYTEPLEFSDLKVGQIVTAKVRHVEDFGVFLVVDNSSNVSGLCHISQLADNA 1315 Query: 488 VED--ATLVLSVGDEVEAKFTGVDRKNRAISLSVR--AKDEADEKDAIATVNKQEDANFS 543 V+ + D V+AK ++ K R IS +++ E + + ++ E A S Sbjct: 1316 VDKDKIKDMYKKDDVVKAKIVKIEPKQRKISFTLKYSQIKGDGEDEDMEDASEDELAEES 1375 Query: 544 NNAMA 548 ++ Sbjct: 1376 DSDGG 1380 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 94/520 (18%), Positives = 185/520 (35%), Gaps = 44/520 (8%) Query: 56 AQGELEIQVGDEVDVALD-----------AVEDGFGETLLSREKAKRHEAWITLEKAYED 104 A + ++G +V + V LS + + + Sbjct: 400 ADVSQKYKIGSKVKARILFTCPNSEPRKVGVSLLDHVVSLSTRMSGKPKERKPPIDLLPI 459 Query: 105 AETVT-GVINGKVKG-GFTVELN--GIRAFLPGSLVDVRPVRDTLHLEGK-----ELEFK 155 + V + G +L + F S + V G+ + + Sbjct: 460 STIVESAKVVKVAPAQGAFFDLGIKDVVGFAHISRLSDDKVDVISEESGQFKLDSTHKAR 519 Query: 156 VIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNL--TDYGA---FVD 210 +I + + +E + + +E++Q G VKG V L GA V Sbjct: 520 IIGYNALDGIFQL----SLEQKVLDQPFLRIEDIQAGQVVKGKVHKLIADKTGAAAVLVH 575 Query: 211 L-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLG---EDP 266 L G+ GL+ +A R++HP G +T +VL + R ++ L LK+ + Sbjct: 576 LADGITGLVPEAHLADVRLQHPERKFREGVPVTARVLYTEPARHQIQLTLKKSLVNSDTK 635 Query: 267 WVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGD 326 + EG G +T++ G V V+ + +EM ++ G Sbjct: 636 PWTNYEMLSEGLTGPGILTSVRRNGATVRFYGDVKAWLPAAEMS-EAFINDATRHFTNGQ 694 Query: 327 VVEVMVLDIDEERRRISLGLKQ--CKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLD 384 VV+V ++ +D + R++ + K N + N D V+G + +D + + Sbjct: 695 VVKVRIISVDAKERQLLVSCKDPAAVDNNREAAFNALNPSDIVKGTVLEKSDDSATLDIG 754 Query: 385 GGIDGLVHLSDISWNVAGEEAV--REYKKGDEIA-AVVLQVDAERERISLG-----VKQL 436 G+ G++ + ++ A ++ ++ + G + VVL + ++ K Sbjct: 755 NGVKGILRIGHLTDGSAKKDISTMKKIRIGGTLEELVVLTKHGKTRSATVSNKPSLRKDA 814 Query: 437 AEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLS 496 + + G V G V + VEL +G+ G L S+ + + + L Sbjct: 815 QASKLAISIEDLQAGETVHGFVRGILPDKIFVELGNGISGVLFKSQLPEEMISEPNFGLR 874 Query: 497 VGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNK 536 + A+ T VD LS++A+ E D + + K Sbjct: 875 KDQSISARVTHVDVGKGFFWLSMKAESELDSANTVDPPMK 914 Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats. Identities = 99/600 (16%), Positives = 202/600 (33%), Gaps = 75/600 (12%) Query: 15 EIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAE----------------------- 51 + + G+IV G ++ I +++ +P Sbjct: 147 KQKLSAGTIVLGQIIDISHQDLVLALPNNLVGYVPLTAVSDKLNERLEKLLKDEGAEKKE 206 Query: 52 -----QFKNAQGELEIQVGDEVDVALDAVEDGFGET--LLSREKAKRHEAWITLEKAYED 104 F++ + VG + + A + L + ++ Sbjct: 207 GSEDGDFEDVDLKDMFSVGQYIRACITATNEDNARARKRLELSIDPKLVNKGLTKRKIPV 266 Query: 105 AETVTGVINGKVKGGFTVELN----GIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLD 160 V + G ++L ++ FLP + ++ EG V ++ Sbjct: 267 NSMVQASVVSNEDHGLVMDLGLGDANLKGFLPKGELGP-KIQHAKVQEGAVFMCLVTGIN 325 Query: 161 QKRNNVVVSRRAV----IESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDG 216 V +S I N+ ++ G V +V + T +G + G Sbjct: 326 SDGRIVKLSADHTKAGNITKGNTLTEAPTIDVFLPGTAVDILVADTTSSTL---VGKILG 382 Query: 217 LLHITDMAW-----KRVKHPSEIVNVGDEITVKVL-----------KFDRERTRVSLGLK 260 L+ T A+ ++ S+ +G ++ ++L VSL + Sbjct: 383 LIDATADAYHSGATEKAADVSQKYKIGSKVKARILFTCPNSEPRKVGVSLLDHVVSLSTR 442 Query: 261 QL-GEDPWVAIAKRYPEGTKLT-GRVTNLTD-YGCFVEIE-EGVEGLVHVSEMDWTNKNI 316 P T + +V + G F ++ + V G H+S + ++ Sbjct: 443 MSGKPKERKPPIDLLPISTIVESAKVVKVAPAQGAFFDLGIKDVVGFAHISRLSDDKVDV 502 Query: 317 HPSK--VVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSI 374 + + + ++ + L L+Q + E G V+GK+ + Sbjct: 503 ISEESGQFKLDSTHKARIIGYNALDGIFQLSLEQKVLDQPFLRIEDIQAGQVVKGKVHKL 562 Query: 375 --TDFGI---FIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERI 429 G + L GI GLV + ++ V + R++++G + A VL + R +I Sbjct: 563 IADKTGAAAVLVHLADGITGLVPEAHLAD-VRLQHPERKFREGVPVTARVLYTEPARHQI 621 Query: 430 SLGVKQLAEDPFNNWVALNK---KGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRD 486 L +K+ + + +G G +T+V GATV V+ +L A+E S Sbjct: 622 QLTLKKSLVNSDTKPWTNYEMLSEGLTGPGILTSVRRNGATVRFYGDVKAWLPAAEMSEA 681 Query: 487 RVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR--AKDEADEKDAIATVNKQEDANFSN 544 + DAT + G V+ + VD K R + +S + A + + + A +N + + Sbjct: 682 FINDATRHFTNGQVVKVRIISVDAKERQLLVSCKDPAAVDNNREAAFNALNPSDIVKGTV 741 Score = 180 bits (458), Expect = 1e-43, Method: Composition-based stats. Identities = 96/575 (16%), Positives = 201/575 (34%), Gaps = 45/575 (7%) Query: 7 QLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLK---SESAIPAEQFKNAQGELEIQ 63 +L + L + + S+V+ VV+ + +++D GL + +P + ++Q Sbjct: 253 KLVNKGLTKRKIPVNSMVQASVVSNEDHGLVMDLGLGDANLKGFLPKGELGPKIQHAKVQ 312 Query: 64 VGDEVDVALDAVEDGFGETLLSREKAKRHEAWI-------TLEKAYEDAETVTGVINGKV 116 G + + LS + K + V ++ Sbjct: 313 EGAVFMCLVTGINSDGRIVKLSADHTKAGNITKGNTLTEAPTIDVFLPGTAVDILVADTT 372 Query: 117 KGGFTVELNG-IRAFLPGSLV-DVRPVRDTL--HLEGKELEFKVI----KLDQKRNNVVV 168 ++ G I A D + G +++ +++ + ++ V + Sbjct: 373 SSTLVGKILGLIDATADAYHSGATEKAADVSQKYKIGSKVKARILFTCPNSEPRKVGVSL 432 Query: 169 SRRAVIESENS----AERDQLLENLQEGMEVK-GIVKNLTD-YGAFVDLG--GVDGLLHI 220 V S ER ++ L V+ V + GAF DLG V G HI Sbjct: 433 LDHVVSLSTRMSGKPKERKPPIDLLPISTIVESAKVVKVAPAQGAFFDLGIKDVVGFAHI 492 Query: 221 TDMAWKRVKHPSE---IVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEG 277 + ++ +V SE + +++ ++ L L+Q D + G Sbjct: 493 SRLSDDKVDVISEESGQFKLDSTHKARIIGYNALDGIFQLSLEQKVLDQPFLRIEDIQAG 552 Query: 278 TKLTGRVTNL--TDYGC---FVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMV 332 + G+V L G V + +G+ GLV + + + HP + G V V Sbjct: 553 QVVKGKVHKLIADKTGAAAVLVHLADGITGLVPEAHLAD-VRLQHPERKFREGVPVTARV 611 Query: 333 LDIDEERRRISLGLKQCKANPWQQFAETHN---KGDRVEGKIKSITDFGIFIGLDGGIDG 389 L + R +I L LK+ N + + +G G + S+ G + G + Sbjct: 612 LYTEPARHQIQLTLKKSLVNSDTKPWTNYEMLSEGLTGPGILTSVRRNGATVRFYGDVKA 671 Query: 390 LVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQL--AEDPFNNWVAL 447 + +++S + + G + ++ VDA+ ++ + K ++ Sbjct: 672 WLPAAEMSEAFINDATR-HFTNGQVVKVRIISVDAKERQLLVSCKDPAAVDNNREAAFNA 730 Query: 448 NKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDA---TLVLSVGDEV-EA 503 IV G V AT+++ +GV+G LR + + + +G + E Sbjct: 731 LNPSDIVKGTVLEKSDDSATLDIGNGVKGILRIGHLTDGSAKKDISTMKKIRIGGTLEEL 790 Query: 504 KFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQE 538 K R+ ++S + D + + ++ ++ Sbjct: 791 VVLTKHGKTRSATVSNKPSLRKDAQASKLAISIED 825 Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 82/542 (15%), Positives = 184/542 (33%), Gaps = 67/542 (12%) Query: 18 TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL------EIQVGDEVD-V 70 P IV+G V+ D +D G + + + + +I++G ++ + Sbjct: 731 LNPSDIVKGTVLEKSDDSATLDIGNGVKGILRIGHLTDGSAKKDISTMKKIRIGGTLEEL 790 Query: 71 ALDAVEDGFGETLLSREKAKRHEAWIT----LEKAYEDAETVTGVINGKVKGGFTVEL-N 125 + +S + + R +A + + + ETV G + G + VEL N Sbjct: 791 VVLTKHGKTRSATVSNKPSLRKDAQASKLAISIEDLQAGETVHGFVRGILPDKIFVELGN 850 Query: 126 GIRAFLPGSLVDVRPVRDTLH--LEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE-- 181 GI L S + + + + + + +V +D + +S +A E +++ Sbjct: 851 GISGVLFKSQLPEEMISEPNFGLRKDQSISARVTHVDVGKGFFWLSMKAESELDSANTVD 910 Query: 182 ---------------RDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAW 225 + ++++ G +K + V+L V G + ++++ Sbjct: 911 PPMKAGETLVDPVDSKILTTDDIKFGTLTTVRIKTVKSTQLNVELADNVQGRISVSELFD 970 Query: 226 KRV-----KHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKL 280 K+P+ + +++ +VL R + L E T Sbjct: 971 GWDSIPDKKNPTAHFKMNEKVQARVLGRHDARN-----FRFLPITSRSNHKTPVYEMTAN 1025 Query: 281 TGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERR 340 T ++ D +I G T + + V V + Sbjct: 1026 TDKIKREADVLSLDKITPG---------SSHTAFVNNIADRY-----VWVNISANVRGPG 1071 Query: 341 RISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNV 400 ++ L + G + ++ I + I + ++ + + L ++ + Sbjct: 1072 KLDLT-AVSTVTGKTMSLQDIKVGYILPARVTKIHEASIVVQINEKLAAPIFLEQLADDY 1130 Query: 401 AGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLA--------EDPFNNWVALNKKGA 452 + + +K GD + V+ +D +++ L + DP + K Sbjct: 1131 DMAKPNK-FKVGDVLRVCVIDIDIPNKKLGLSARPSRVLSSSLTVRDPEIKDKSQLKVHQ 1189 Query: 453 IVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKN 512 +V G + V + G V L VE Y+R S S + ++D V V K ++++ Sbjct: 1190 VVRGFIKHVASNGVYVRLGPHVEAYVRVSHLSDEYIKDWKSAFHVDQLVTGKIIS-NKED 1248 Query: 513 RA 514 + Sbjct: 1249 QR 1250 Score = 165 bits (417), Expect = 5e-39, Method: Composition-based stats. Identities = 90/579 (15%), Positives = 191/579 (32%), Gaps = 64/579 (11%) Query: 14 KEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE---IQVGDEVDV 70 G G++ ++ ++ V ++ +PA + A G V V Sbjct: 639 NYEMLSEGLTGPGILTSVRRNGATVRFYGDVKAWLPAAEMSEAFINDATRHFTNGQVVKV 698 Query: 71 ALDAVEDGFGETLL-SREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL-NGIR 128 + +V+ + L+ ++ A A ++ V G + K T+++ NG++ Sbjct: 699 RIISVDAKERQLLVSCKDPAAVDNNREAAFNALNPSDIVKGTVLEKSDDSATLDIGNGVK 758 Query: 129 AFLPGSLVDVRPVRDTLH-----LEGKELE--FKVIKLDQKRNNVVVSRRAVIESENSAE 181 L + + + G LE + K + R+ V ++ ++ + +++ Sbjct: 759 GILRIGHLTDGSAKKDISTMKKIRIGGTLEELVVLTKHGKTRSATVSNKPSLRKDAQASK 818 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDE 240 +E+LQ G V G V+ + FV+LG G+ G+L + + + + P+ + Sbjct: 819 LAISIEDLQAGETVHGFVRGILPDKIFVELGNGISGVLFKSQLPEEMISEPNFGLRKDQS 878 Query: 241 ITVKVLKFDRERTRVSLGLKQLGE---------------------DPWVAIAKRYPEGTK 279 I+ +V D + L +K E D + GT Sbjct: 879 ISARVTHVDVGKGFFWLSMKAESELDSANTVDPPMKAGETLVDPVDSKILTTDDIKFGTL 938 Query: 280 LTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKN----IHPSKVVNVGDVVEVMVLDI 335 T R+ + VE+ + V+G + VSE+ + +P+ + + V+ VL Sbjct: 939 TTVRIKTVKSTQLNVELADNVQGRISVSELFDGWDSIPDKKNPTAHFKMNEKVQARVLGR 998 Query: 336 DEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVH--- 392 + R + + KIK D + LD G H Sbjct: 999 HDARN-----FRFLPITSRSNHKTPVYEMTANTDKIKREAD---VLSLDKITPGSSHTAF 1050 Query: 393 LSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGA 452 +++I+ ++ L + K G Sbjct: 1051 VNNIADRYVWVNISANV--------------RGPGKLDLTA-VSTVTGKTMSLQDIKVGY 1095 Query: 453 IVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKN 512 I+ +VT + V++ + + + + + D VGD + +D N Sbjct: 1096 ILPARVTKIHEASIVVQINEKLAAPIFLEQLADDYDMAKPNKFKVGDVLRVCVIDIDIPN 1155 Query: 513 RAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAF 551 + + LS R + ++ + + + F Sbjct: 1156 KKLGLSARPSRVLSSSLTVRDPEIKDKSQLKVHQVVRGF 1194 Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats. Identities = 69/434 (15%), Positives = 138/434 (31%), Gaps = 38/434 (8%) Query: 148 EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGA 207 G+ + + ++ R + + + V+ V + D+G Sbjct: 224 VGQYIRACITATNEDNARAR-KRLELSIDPKLVNKGLTKRKIPVNSMVQASVVSNEDHGL 282 Query: 208 FVDLG----GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLG---LK 260 +DLG + G L ++ +++H V G V + + V L K Sbjct: 283 VMDLGLGDANLKGFLPKGELG-PKIQHAK--VQEGAVFMCLVTGINSDGRIVKLSADHTK 339 Query: 261 QLGEDPWVAIAKR-----YPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKN 315 + + + GT + V + T +I ++ T K Sbjct: 340 AGNITKGNTLTEAPTIDVFLPGTAVDILVADTTSSTLVGKILGLIDATADAYHSGATEKA 399 Query: 316 IHPSKVVNVGDVVEVMVLDI--DEERRRISLGLKQC----------KANPWQQFAETHNK 363 S+ +G V+ +L + E R++ + L K + + Sbjct: 400 ADVSQKYKIGSKVKARILFTCPNSEPRKVGVSLLDHVVSLSTRMSGKPKERKPPIDLLPI 459 Query: 364 GDRVE-GKIKSITD-FGIFIGLD-GGIDGLVHLSDISWNVA--GEEAVREYKKGDEIAAV 418 VE K+ + G F L + G H+S +S + E ++K A Sbjct: 460 STIVESAKVVKVAPAQGAFFDLGIKDVVGFAHISRLSDDKVDVISEESGQFKLDSTHKAR 519 Query: 419 VLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVD--AKGA---TVELADG 473 ++ +A L ++Q D + + G +V GKV + GA V LADG Sbjct: 520 IIGYNALDGIFQLSLEQKVLDQPFLRIEDIQAGQVVKGKVHKLIADKTGAAAVLVHLADG 579 Query: 474 VEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIAT 533 + G + + + R++ G V A+ + I L+++ + Sbjct: 580 ITGLVPEAHLADVRLQHPERKFREGVPVTARVLYTEPARHQIQLTLKKSLVNSDTKPWTN 639 Query: 534 VNKQEDANFSNNAM 547 + + Sbjct: 640 YEMLSEGLTGPGIL 653 >UniRef50_A9WBG5 RNA binding S1 domain protein n=2 Tax=Chloroflexus RepID=A9WBG5_CHLAA Length = 520 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 86/283 (30%), Positives = 139/283 (49%), Gaps = 26/283 (9%) Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNV 237 + + L++LQ GME++G V ++ YG FVD+G G DGL+HI++M+ +R++ PSE+V + Sbjct: 91 QPHKPRRLKDLQPGMELEGKVTSIALYGVFVDIGVGRDGLVHISEMSDRRIETPSEVVQI 150 Query: 238 GDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKR--------------------YPEG 277 GD + V V + E R+SL ++ A++ G Sbjct: 151 GDTVKVWVKSIEPEARRISLTMRDPARAETPRRARQPQPQQQQPRRQEVDREKLAALRVG 210 Query: 278 TKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDE 337 + G +T +G F +I G +GL+HVSE+ + P V VG+ + +L+ID Sbjct: 211 DVVEGVITGFAPFGAFADIGVGKDGLIHVSELAEG-RVEKPEDAVKVGERYQFKILEIDG 269 Query: 338 ERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDIS 397 E RISL L++ Q + G +EG + I FG F+ + G DGLVH+S ++ Sbjct: 270 EAARISLSLRRALR---TQRMQQLETGQILEGTVSGIAPFGAFVDIGVGRDGLVHISALA 326 Query: 398 WNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDP 440 + + V L VD + +RISL ++ E P Sbjct: 327 PHRVEKVEDVVKVGDKVKVKV-LGVDQQSKRISLTMRLEEEQP 368 Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats. Identities = 88/284 (30%), Positives = 139/284 (48%), Gaps = 25/284 (8%) Query: 263 GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVV 322 + K G +L G+VT++ YG FV+I G +GLVH+SEM + PS+VV Sbjct: 90 DQPHKPRRLKDLQPGMELEGKVTSIALYGVFVDIGVGRDGLVHISEMSD-RRIETPSEVV 148 Query: 323 NVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAET--------------------HN 362 +GD V+V V I+ E RRISL ++ + A Sbjct: 149 QIGDTVKVWVKSIEPEARRISLTMRDPARAETPRRARQPQPQQQQPRRQEVDREKLAALR 208 Query: 363 KGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQV 422 GD VEG I FG F + G DGL+H+S+++ E+ K G+ +L++ Sbjct: 209 VGDVVEGVITGFAPFGAFADIGVGKDGLIHVSELAEGRV-EKPEDAVKVGERYQFKILEI 267 Query: 423 DAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASE 482 D E RISL +++ + + G I+ G V+ + GA V++ G +G + S Sbjct: 268 DGEAARISLSLRRALRT---QRMQQLETGQILEGTVSGIAPFGAFVDIGVGRDGLVHISA 324 Query: 483 ASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEAD 526 + RVE V+ VGD+V+ K GVD++++ ISL++R ++E Sbjct: 325 LAPHRVEKVEDVVKVGDKVKVKVLGVDQQSKRISLTMRLEEEQP 368 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 70/289 (24%), Positives = 129/289 (44%), Gaps = 24/289 (8%) Query: 85 SREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRPVRD 143 + K + + G + G V++ G + S + R + Sbjct: 84 FTPVSDDQPHKPRRLKDLQPGMELEGKVTSIALYGVFVDIGVGRDGLVHISEMSDRRIET 143 Query: 144 TLHLE--GKELEFKVIKLDQKRNNVVVSRRAVIESE----------------NSAERDQL 185 + G ++ V ++ + + ++ R +E + Sbjct: 144 PSEVVQIGDTVKVWVKSIEPEARRISLTMRDPARAETPRRARQPQPQQQQPRRQEVDREK 203 Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 L L+ G V+G++ +GAF D+G G DGL+H++++A RV+ P + V VG+ K Sbjct: 204 LAALRVGDVVEGVITGFAPFGAFADIGVGKDGLIHVSELAEGRVEKPEDAVKVGERYQFK 263 Query: 245 VLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLV 304 +L+ D E R+SL L++ + ++ G L G V+ + +G FV+I G +GLV Sbjct: 264 ILEIDGEAARISLSLRRALRTQRM---QQLETGQILEGTVSGIAPFGAFVDIGVGRDGLV 320 Query: 305 HVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP 353 H+S + ++ VV VGD V+V VL +D++ +RISL ++ + P Sbjct: 321 HISALA-PHRVEKVEDVVKVGDKVKVKVLGVDQQSKRISLTMRLEEEQP 368 Score = 172 bits (437), Expect = 3e-41, Method: Composition-based stats. Identities = 51/209 (24%), Positives = 81/209 (38%), Gaps = 21/209 (10%) Query: 360 THNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVV 419 G +EGK+ SI +G+F+ + G DGLVH+S++S E + GD + V Sbjct: 100 DLQPGMELEGKVTSIALYGVFVDIGVGRDGLVHISEMSDRRI-ETPSEVVQIGDTVKVWV 158 Query: 420 LQVDAERERISLGVKQLAEDPFNNWV--------------------ALNKKGAIVTGKVT 459 ++ E RISL ++ A A + G +V G +T Sbjct: 159 KSIEPEARRISLTMRDPARAETPRRARQPQPQQQQPRRQEVDREKLAALRVGDVVEGVIT 218 Query: 460 AVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSV 519 GA ++ G +G + SE + RVE + VG+ + K +D + ISLS+ Sbjct: 219 GFAPFGAFADIGVGKDGLIHVSELAEGRVEKPEDAVKVGERYQFKILEIDGEAARISLSL 278 Query: 520 RAKDEADEKDAIATVNKQEDANFSNNAMA 548 R + T E Sbjct: 279 RRALRTQRMQQLETGQILEGTVSGIAPFG 307 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 68/280 (24%), Positives = 124/280 (44%), Gaps = 33/280 (11%) Query: 14 KEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE---LEIQVGDEVDV 70 + + +PG + G V +I V VD G+ + + + + + E +Q+GD V V Sbjct: 97 RLKDLQPGMELEGKVTSIALYGVFVDIGVGRDGLVHISEMSDRRIETPSEVVQIGDTVKV 156 Query: 71 ALDAVEDGFGETLLSREKAKRHEAWITLEK-------------------AYEDAETVTGV 111 + ++E L+ R E + A + V GV Sbjct: 157 WVKSIEPEARRISLTMRDPARAETPRRARQPQPQQQQPRRQEVDREKLAALRVGDVVEGV 216 Query: 112 INGKVKGGFTVELN-GIRAFLPGSLVDVRPVRDTLH--LEGKELEFKVIKLDQKRNNVVV 168 I G G ++ G + S + V G+ +FK++++D + + + Sbjct: 217 ITGFAPFGAFADIGVGKDGLIHVSELAEGRVEKPEDAVKVGERYQFKILEIDGEAARISL 276 Query: 169 SRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKR 227 S R + ++ ++ L+ G ++G V + +GAFVD+G G DGL+HI+ +A R Sbjct: 277 SLRRALRTQR-------MQQLETGQILEGTVSGIAPFGAFVDIGVGRDGLVHISALAPHR 329 Query: 228 VKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPW 267 V+ ++V VGD++ VKVL D++ R+SL ++ E P Sbjct: 330 VEKVEDVVKVGDKVKVKVLGVDQQSKRISLTMRLEEEQPA 369 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 45/91 (49%) Query: 436 LAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVL 495 + + + G + GKVT++ G V++ G +G + SE S R+E + V+ Sbjct: 89 DDQPHKPRRLKDLQPGMELEGKVTSIALYGVFVDIGVGRDGLVHISEMSDRRIETPSEVV 148 Query: 496 SVGDEVEAKFTGVDRKNRAISLSVRAKDEAD 526 +GD V+ ++ + R ISL++R A+ Sbjct: 149 QIGDTVKVWVKSIEPEARRISLTMRDPARAE 179 Score = 89.6 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 24/134 (17%), Positives = 47/134 (35%), Gaps = 8/134 (5%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQGELEIQVGDE 67 + K R G +V GV+ D G+ + I + + E ++VG+ Sbjct: 200 DREKLAALRVGDVVEGVITGFAPFGAFADIGVGKDGLIHVSELAEGRVEKPEDAVKVGER 259 Query: 68 VDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-G 126 + ++ LS +A R + L E + + G ++G G V++ G Sbjct: 260 YQFKILEIDGEAARISLSLRRALRTQRMQQL----ETGQILEGTVSGIAPFGAFVDIGVG 315 Query: 127 IRAFLPGSLVDVRP 140 + S + Sbjct: 316 RDGLVHISALAPHR 329 >UniRef50_P73530 30S ribosomal protein S1 homolog A n=61 Tax=cellular organisms RepID=RS1A_SYNY3 Length = 328 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 81/282 (28%), Positives = 138/282 (48%), Gaps = 14/282 (4%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA---QGE 59 E FA L ++ + PG IV G V +++ L+D G K+ + IP ++ E Sbjct: 15 EDFAALLDKY--DYHFSPGDIVAGTVFSMESRGALIDIGAKTAAYIPIQEMSINRVDDPE 72 Query: 60 LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGG 119 +Q + + + E+ G+ LS + + AW + + + TV + +GG Sbjct: 73 EVLQPNETREFFILTDENEDGQLTLSIRRIEYMRAWERVRQLQAEDATVRSNVFATNRGG 132 Query: 120 FTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 V + G+R F+PGS + R ++ L G++L K +++D++RN +V+S R + Sbjct: 133 ALVRIEGLRGFIPGSHISAREAKE--DLVGEDLPLKFLEVDEERNRLVLSHRRALVERK- 189 Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGD 239 + L+ V G V+ + YGAF+D+GGV GLLHI++++ + P + NV D Sbjct: 190 ------MNGLEVAQVVVGSVRGIKPYGAFIDIGGVSGLLHISEISHDHIDTPHSVFNVND 243 Query: 240 EITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLT 281 EI V ++ D ER R+SL KQL +P + R Sbjct: 244 EIKVMIIDLDAERGRISLSTKQLEPEPGAMLKDRDLVNEMAD 285 Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 60/287 (20%), Positives = 122/287 (42%), Gaps = 16/287 (5%) Query: 270 IAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVE 329 + G + G V ++ G ++I + + EM N+ P +V+ + E Sbjct: 24 YDYHFSPGDIVAGTVFSMESRGALIDIGAKTAAYIPIQEMS-INRVDDPEEVLQPNETRE 82 Query: 330 VMVLDIDEERRRISLGLKQCK-ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGID 388 +L + E +++L +++ + W++ + + V + + G + ++ G+ Sbjct: 83 FFILTDENEDGQLTLSIRRIEYMRAWERVRQLQAEDATVRSNVFATNRGGALVRIE-GLR 141 Query: 389 GLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALN 448 G + S IS A E+ G+++ L+VD ER R+ L ++ + Sbjct: 142 GFIPGSHISAREAKEDL-----VGEDLPLKFLEVDEERNRLVLSHRRAL---VERKMNGL 193 Query: 449 KKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGV 508 + +V G V + GA +++ GV G L SE S D ++ V +V DE++ + Sbjct: 194 EVAQVVVGSVRGIKPYGAFIDIG-GVSGLLHISEISHDHIDTPHSVFNVNDEIKVMIIDL 252 Query: 509 DRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAAK 555 D + ISLS + + A + ++ N + MAE F+ + Sbjct: 253 DAERGRISLSTKQLEPEPG----AMLKDRDLVNEMADEMAEIFRQKR 295 >UniRef50_B9L9K6 30S ribosomal protein S1 n=2 Tax=Nautiliaceae RepID=B9L9K6_NAUPA Length = 386 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 105/417 (25%), Positives = 198/417 (47%), Gaps = 33/417 (7%) Query: 99 EKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIK 158 + + V I +KGGF ++G FLP SL ++ + GK ++ V + Sbjct: 1 MSELKVGDVVEFKIEKLIKGGFVGYVDGQEIFLPKSLSGLKEDE---SVIGKTVKAYVKE 57 Query: 159 LDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLL 218 K+N+VVV R+A + + + + +V + G +D+ G+ G + Sbjct: 58 F--KQNSVVVDRKAYLNDIKAKLESK------ADEVIDAVVTKVKPKGIVIDVDGISGFV 109 Query: 219 HITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGT 278 ++ +K++ H + ++ GDE+ VK+ D R +K+ +PW + K G Sbjct: 110 PKEEIFYKKIDH-RQYISEGDEVQVKL--IDPVRR--IFSIKKTLPNPWEEV-KELNIGD 163 Query: 279 KLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEE 338 + V+++TDYG FV++ GVEG +H+SE++W N + +GD +EV +++I+ E Sbjct: 164 VVKVSVSHITDYGAFVDLGNGVEGFLHISEINWDGIND-----LTLGDEIEVEIVEINPE 218 Query: 339 RRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISW 398 ++ + K P F E HN GD VEG I + G F+ +D GI L+ + + Sbjct: 219 EEKLRVSRKNLLTKPAVIFNENHNVGDIVEGVITKFINVGAFVEID-GISTLLP-NKFAS 276 Query: 399 NVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKV 458 GE+A + GD++ ++ + E ++ + K +P++++ ++ G V GKV Sbjct: 277 FKKGEKANEIFNIGDKLEFKIITISPEENKVIVSRKDAMPNPYDSFAQTHQVGDEVEGKV 336 Query: 459 TAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAI 515 + G ++L D +E + R ED ++GDE + K ++ + + Sbjct: 337 KYITDFGMFIDLGD-IEALV--------RKEDFNNEYNIGDEFKGKIIEINGERVKL 384 Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 105/417 (25%), Positives = 184/417 (44%), Gaps = 33/417 (7%) Query: 15 EIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDA 74 E + G +V + + K + E +P + E E +G V + Sbjct: 1 MSELKVGDVVEFKIEKLIKGGFVGYVDG-QEIFLPKS--LSGLKEDESVIGKTVKAYVKE 57 Query: 75 VEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGS 134 + + + E + V+ G ++++GI F+P Sbjct: 58 FKQNSVVVDRKAYLNDIKAKLES-----KADEVIDAVVTKVKPKGIVIDVDGISGFVPKE 112 Query: 135 LVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGME 194 + + + D + E +V +D RR + + ++ L G Sbjct: 113 EIFYKKI-DHRQYISEGDEVQVKLIDP-------VRRIFSIKKTLPNPWEEVKELNIGDV 164 Query: 195 VKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERT 253 VK V ++TDYGAFVDLG GV+G LHI+++ W + + +GDEI V++++ + E Sbjct: 165 VKVSVSHITDYGAFVDLGNGVEGFLHISEINWDGIND----LTLGDEIEVEIVEINPEEE 220 Query: 254 RVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTN 313 ++ + K L P V + + G + G +T + G FVEI +G+ L+ + Sbjct: 221 KLRVSRKNLLTKPAVIFNENHNVGDIVEGVITKFINVGAFVEI-DGISTLLPN-KFASFK 278 Query: 314 KNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKS 373 K +++ N+GD +E ++ I E ++ + K NP+ FA+TH GD VEGK+K Sbjct: 279 KGEKANEIFNIGDKLEFKIITISPEENKVIVSRKDAMPNPYDSFAQTHQVGDEVEGKVKY 338 Query: 374 ITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERIS 430 ITDFG+FI L I+ LV E+ EY GDE +++++ ER +++ Sbjct: 339 ITDFGMFIDLGD-IEALV---------RKEDFNNEYNIGDEFKGKIIEINGERVKLA 385 Score = 180 bits (458), Expect = 1e-43, Method: Composition-based stats. Identities = 82/364 (22%), Positives = 156/364 (42%), Gaps = 23/364 (6%) Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKV 245 + L+ G V+ ++ L G + G + L + K + +G + V Sbjct: 1 MSELKVGDVVEFKIEKLIKGGFVGYVDGQEIFLPKSLSGLKEDESV-----IGKTVKAYV 55 Query: 246 LKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVH 305 +F ++ V + K D + + VT + G +++ +G+ G V Sbjct: 56 KEF--KQNSVVVDRKAYLNDIKAKLES--KADEVIDAVVTKVKPKGIVIDV-DGISGFVP 110 Query: 306 VSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGD 365 E+ K I + ++ GD V+V + ID RR +K+ NPW++ + N GD Sbjct: 111 KEEI--FYKKIDHRQYISEGDEVQVKL--IDPVRR--IFSIKKTLPNPWEE-VKELNIGD 163 Query: 366 RVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAE 425 V+ + ITD+G F+ L G++G +H+S+I+W+ + GDEI +++++ E Sbjct: 164 VVKVSVSHITDYGAFVDLGNGVEGFLHISEINWDGIND-----LTLGDEIEVEIVEINPE 218 Query: 426 RERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASR 485 E++ + K L P + + G IV G +T GA VE+ DG+ L AS Sbjct: 219 EEKLRVSRKNLLTKPAVIFNENHNVGDIVEGVITKFINVGAFVEI-DGISTLLPNKFASF 277 Query: 486 DRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNN 545 + E A + ++GD++E K + + + +S + T ++ Sbjct: 278 KKGEKANEIFNIGDKLEFKIITISPEENKVIVSRKDAMPNPYDSFAQTHQVGDEVEGKVK 337 Query: 546 AMAE 549 + + Sbjct: 338 YITD 341 Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats. Identities = 65/339 (19%), Positives = 153/339 (45%), Gaps = 22/339 (6%) Query: 6 AQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVG 65 + ++E++ ++ VV + +++D +P E+ + + + Sbjct: 68 KAYLNDIKAKLESKADEVIDAVVTKVKPKGIVIDVDG-ISGFVPKEEIFYKKIDHRQYIS 126 Query: 66 DEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL- 124 + +V + ++ + + E L + V ++ G V+L Sbjct: 127 EGDEVQVKLIDPVRRIFSIKKTLPNPWEEVKEL----NIGDVVKVSVSHITDYGAFVDLG 182 Query: 125 NGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQ 184 NG+ FL S ++ + D G E+E ++++++ + + VSR+ ++ Sbjct: 183 NGVEGFLHISEINWDGINDLT--LGDEIEVEIVEINPEEEKLRVSRKNLLTKPA----VI 236 Query: 185 LLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 EN G V+G++ + GAFV++ G+ LL ++K+ + +EI N+GD++ K Sbjct: 237 FNENHNVGDIVEGVITKFINVGAFVEIDGISTLLPNKFASFKKGEKANEIFNIGDKLEFK 296 Query: 245 VLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLV 304 ++ E +V + K +P+ + A+ + G ++ G+V +TD+G F+++ + +E LV Sbjct: 297 IITISPEENKVIVSRKDAMPNPYDSFAQTHQVGDEVEGKVKYITDFGMFIDLGD-IEALV 355 Query: 305 HVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRIS 343 + + N+GD + +++I+ ER +++ Sbjct: 356 ---------RKEDFNNEYNIGDEFKGKIIEINGERVKLA 385 >UniRef50_A9B5U0 RNA binding S1 domain protein n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B5U0_HERA2 Length = 501 Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats. Identities = 85/274 (31%), Positives = 138/274 (50%), Gaps = 22/274 (8%) Query: 184 QLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 + L +L GME+ G V + YG FVD+G G DGL+HI++M+ +R++ P+++V +GD + Sbjct: 97 RRLADLHAGMELDGKVTSTALYGVFVDIGVGRDGLVHISEMSDQRIESPTDVVQIGDIVK 156 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAK----------RYPEGTKLTGRVTNLTDYGC 292 V+V D + R+SL ++ + K G + G V + +G Sbjct: 157 VRVKSVDPDARRISLTMRSPRSEGRRRAPKRPEVNNDKLGELKPGDLVDGTVNGIAPFGV 216 Query: 293 FVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN 352 FV+I G +GLVH+SE+ N+ V VG VL++D +RISL L++ K + Sbjct: 217 FVDIGVGKDGLVHISELS-ENRVEKAEDAVTVGQSYTFRVLEVDTGAQRISLSLRRAKED 275 Query: 353 PWQQFAET---------HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGE 403 ++ G ++GK+ I FG F+ L G DGLVH+S++S G+ Sbjct: 276 FQERPKAPRRREVNLDVIAPGTVLDGKVSGIAPFGAFVDLGVGRDGLVHISELSEGRVGK 335 Query: 404 EAVREYKKGDEIAAVVLQVDAERERISLGVKQLA 437 D + VL+VD + +RISL ++ Sbjct: 336 VDDVVKVG-DPVKVRVLEVDPDSKRISLTMRVEE 368 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 88/283 (31%), Positives = 135/283 (47%), Gaps = 22/283 (7%) Query: 263 GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVV 322 + G +L G+VT+ YG FV+I G +GLVH+SEM + P+ VV Sbjct: 91 EDGTTPRRLADLHAGMELDGKVTSTALYGVFVDIGVGRDGLVHISEMSD-QRIESPTDVV 149 Query: 323 NVGDVVEVMVLDIDEERRRISLGLK----------QCKANPWQQFAETHNKGDRVEGKIK 372 +GD+V+V V +D + RRISL ++ + GD V+G + Sbjct: 150 QIGDIVKVRVKSVDPDARRISLTMRSPRSEGRRRAPKRPEVNNDKLGELKPGDLVDGTVN 209 Query: 373 SITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLG 432 I FG+F+ + G DGLVH+S++S N + A G VL+VD +RISL Sbjct: 210 GIAPFGVFVDIGVGKDGLVHISELSENRVEK-AEDAVTVGQSYTFRVLEVDTGAQRISLS 268 Query: 433 VK---------QLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEA 483 ++ A + + G ++ GKV+ + GA V+L G +G + SE Sbjct: 269 LRRAKEDFQERPKAPRRREVNLDVIAPGTVLDGKVSGIAPFGAFVDLGVGRDGLVHISEL 328 Query: 484 SRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEAD 526 S RV V+ VGD V+ + VD ++ ISL++R +EA Sbjct: 329 SEGRVGKVDDVVKVGDPVKVRVLEVDPDSKRISLTMR-VEEAP 370 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 62/268 (23%), Positives = 114/268 (42%), Gaps = 21/268 (7%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE---LEIQVGDEVDVALD 73 + G + G V + V VD G+ + + + + + E +Q+GD V V + Sbjct: 101 DLHAGMELDGKVTSTALYGVFVDIGVGRDGLVHISEMSDQRIESPTDVVQIGDIVKVRVK 160 Query: 74 AVEDGFGETLLSREKAKRHEAWITLEK---------AYEDAETVTGVINGKVKGGFTVEL 124 +V+ L+ + ++ + + V G +NG G V++ Sbjct: 161 SVDPDARRISLTMRSPRSEGRRRAPKRPEVNNDKLGELKPGDLVDGTVNGIAPFGVFVDI 220 Query: 125 N-GIRAFLPGSLVDVRPVRDTLH--LEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 G + S + V G+ F+V+++D + +S R E Sbjct: 221 GVGKDGLVHISELSENRVEKAEDAVTVGQSYTFRVLEVDTGAQRISLSLRRAKEDFQERP 280 Query: 182 -----RDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIV 235 R+ L+ + G + G V + +GAFVDLG G DGL+HI++++ RV ++V Sbjct: 281 KAPRRREVNLDVIAPGTVLDGKVSGIAPFGAFVDLGVGRDGLVHISELSEGRVGKVDDVV 340 Query: 236 NVGDEITVKVLKFDRERTRVSLGLKQLG 263 VGD + V+VL+ D + R+SL ++ Sbjct: 341 KVGDPVKVRVLEVDPDSKRISLTMRVEE 368 Score = 94.6 bits (234), Expect = 8e-18, Method: Composition-based stats. Identities = 33/174 (18%), Positives = 60/174 (34%), Gaps = 14/174 (8%) Query: 14 KEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQG---ELEIQVGDEVDV 70 K E +PG +V G V I V VD G+ + + + + E + VG Sbjct: 194 KLGELKPGDLVDGTVNGIAPFGVFVDIGVGKDGLVHISELSENRVEKAEDAVTVGQSYTF 253 Query: 71 ALDAVEDGFGETLLSREKAKRHEA--------WITLEKAYEDAETVTGVINGKVKGGFTV 122 + V+ G LS +AK + G ++G G V Sbjct: 254 RVLEVDTGAQRISLSLRRAKEDFQERPKAPRRREVNLDVIAPGTVLDGKVSGIAPFGAFV 313 Query: 123 ELN-GIRAFLPGSLVDVRP--VRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAV 173 +L G + S + D + G ++ +V+++D + ++ R Sbjct: 314 DLGVGRDGLVHISELSEGRVGKVDDVVKVGDPVKVRVLEVDPDSKRISLTMRVE 367 Score = 92.3 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 2/106 (1%) Query: 446 ALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKF 505 A G + GKVT+ G V++ G +G + SE S R+E T V+ +GD V+ + Sbjct: 100 ADLHAGMELDGKVTSTALYGVFVDIGVGRDGLVHISEMSDQRIESPTDVVQIGDIVKVRV 159 Query: 506 TGVDRKNRAISLSVRAKDEADEKDAIA--TVNKQEDANFSNNAMAE 549 VD R ISL++R+ + A VN + + + Sbjct: 160 KSVDPDARRISLTMRSPRSEGRRRAPKRPEVNNDKLGELKPGDLVD 205 >UniRef50_B0SDD9 30S Ribosomal protein S1 n=6 Tax=Leptospira RepID=B0SDD9_LEPBA Length = 385 Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 95/380 (25%), Positives = 174/380 (45%), Gaps = 14/380 (3%) Query: 2 TESFAQLFEESLKEIE-TRPGSIVRGVVVAIDKDVVLV-DAGLKSESAIPAEQFKNAQGE 59 + F +L EES K+ + PGS V A+ D V + K I E++ + + Sbjct: 5 SSEFDRLLEESFKKRQSIEPGSRHEAKVTAVKNDYVFIRTVENKVIGNISTEEW---RED 61 Query: 60 LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGG 119 + ++GD + V G E LE A + V G + + GG Sbjct: 62 VLPKIGDHIVVYFLKENSGDFYFTTCLSADNLTE--ENLELANQFEIPVLGQMLQEGSGG 119 Query: 120 FTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 + V+L AF+P S +DV + GK ++F + +L +K+N +++S++ + + E Sbjct: 120 WDVKLGSYTAFVPFSQLDVSLKGKNIG--GKRIKFIISELGKKQNKILLSQKKIADKERE 177 Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGD 239 ++ L + L+ GM V VK++ +G VD+ G+D L+ ++ +K+ + VG+ Sbjct: 178 TKKQLLRDELKVGMFVSCNVKSIHKFGLIVDMDGLDALVPQSEATYKKNPDLTTEFRVGE 237 Query: 240 EITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEG 299 + K+L D ++SL +K DPW + E ++G V ++ +G FV + E Sbjct: 238 TLRAKILTLDWSTNKISLSVKDFLSDPWSGKL-PFKESDIVSGTVESIKPFGLFVRLGED 296 Query: 300 VEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAE 359 GLV E + + V G +EV VL+I+ E+R+I+L + + + + Sbjct: 297 FSGLVPNKESGVPQRTP-LNTVFQPGQKLEVFVLEINPEKRQIALSITKAAEAKDRMEYQ 355 Query: 360 THNKGDRVEGKIKSITDFGI 379 + D S++ FG+ Sbjct: 356 DYLSKDDAT---TSVSSFGL 372 Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats. Identities = 74/393 (18%), Positives = 161/393 (40%), Gaps = 26/393 (6%) Query: 172 AVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVD-LGGVDGLLHITDMAWKRVKH 230 + E + ++++ G + V + + F+ + I +++ + + Sbjct: 5 SSEFDRLLEESFKKRQSIEPGSRHEAKVTAVKNDYVFIRTVENKV----IGNISTEEWR- 59 Query: 231 PSEIV-NVGDEITVKVLKFDRERTRVS--LGLKQLGEDPWVAIAKRYPEGTKLTGRVTNL 287 +++ +GD I V LK + + L L E+ + + G++ Sbjct: 60 -EDVLPKIGDHIVVYFLKENSGDFYFTTCLSADNLTEENLELANQFEIP---VLGQMLQE 115 Query: 288 TDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLK 347 G V++ V S++D + K + G ++ ++ ++ +++ +I L K Sbjct: 116 GSGGWDVKLGSYT-AFVPFSQLDVSLKGKNIG-----GKRIKFIISELGKKQNKILLSQK 169 Query: 348 QCKANPWQQFAE----THNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGE 403 + + + G V +KSI FG+ + +D G+D LV S+ ++ Sbjct: 170 KIADKERETKKQLLRDELKVGMFVSCNVKSIHKFGLIVDMD-GLDALVPQSEATYKK-NP 227 Query: 404 EAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDA 463 + E++ G+ + A +L +D +ISL VK DP++ + K+ IV+G V ++ Sbjct: 228 DLTTEFRVGETLRAKILTLDWSTNKISLSVKDFLSDPWSGKL-PFKESDIVSGTVESIKP 286 Query: 464 KGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKD 523 G V L + G + E+ + V G ++E ++ + R I+LS+ Sbjct: 287 FGLFVRLGEDFSGLVPNKESGVPQRTPLNTVFQPGQKLEVFVLEINPEKRQIALSITKAA 346 Query: 524 EADEKDAIATVNKQEDANFSNNAMAEAFKAAKG 556 EA ++ ++DA S ++ A K + Sbjct: 347 EAKDRMEYQDYLSKDDATTSVSSFGLALKQSLE 379 >UniRef50_A4XKP1 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XKP1_CALS8 Length = 662 Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats. Identities = 86/379 (22%), Positives = 174/379 (45%), Gaps = 11/379 (2%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQF---KNAQG 58 + FA+L ++S E + G IV+G ++ +++D +LVD G K+E I + N Sbjct: 287 NQDFAKLLDKSFA--EIKRGEIVKGKIIKVEQDYLLVDIGYKAEGIIYKNEIFKNANVNL 344 Query: 59 ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 + + ++ + D G +LS+ KA + L +E + V+ + Sbjct: 345 KNIFNENEIIEAVVIKESDEEGNVVLSKLKADSIYGFNELMAKFESKTPIKIVVKQIRER 404 Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 E GI F+P S + + GK E +++ +D + SR+ ++ Sbjct: 405 SIVGEFRGINVFVPISQWAE---EVSSSIIGKVFEVEIVDIDTDKKIAFGSRKFLLRQAQ 461 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAW-KRVKHPSEIVNV 237 + Q +E+L + G++ + G V+ G+ G + +++++ KR++ ++ V Sbjct: 462 EKKIQQAIESLDFNKDYDGVIAEIRQKGIVVNFEGLRGFVPASEISYSKRIEDVKKLFKV 521 Query: 238 GDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE 297 G+++ V+V+ D+++ ++ L +K+ ED W+ K G + VT + +G V I Sbjct: 522 GEQVKVRVIDIDKQKKQIYLSIKKTQEDEWIKKVKNLYLGMLVDVEVTKVLSFGLVVWIL 581 Query: 298 E-GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQ 356 + ++G VHVS + N + VGD ++ +++IDE+RRRI L LK + Sbjct: 582 DCELDGFVHVSNIPLGY-NQRLHSLYKVGDKIKAKIIEIDEQRRRIGLSLKDLYEEEEKI 640 Query: 357 FAETHNKGDRVEGKIKSIT 375 + + + +I Sbjct: 641 AEHKEDFVITIADIVNNIK 659 Score = 187 bits (475), Expect = 9e-46, Method: Composition-based stats. Identities = 87/389 (22%), Positives = 172/389 (44%), Gaps = 21/389 (5%) Query: 150 KELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFV 209 +E +++++ +KR N + ++ D+ ++ G VKG + + V Sbjct: 268 QEQISEIVEILEKRFNQIDNQDFA------KLLDKSFAEIKRGEIVKGKIIKVEQDYLLV 321 Query: 210 DLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLG-LKQLGEDPW 267 D+G +G+++ ++ + I N + I V+K E V L LK + Sbjct: 322 DIGYKAEGIIYKNEIFKNANVNLKNIFNENEIIEAVVIKESDEEGNVVLSKLKADSIYGF 381 Query: 268 VAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDV 327 + ++ T + V + + E G+ V +S+ + KV Sbjct: 382 NELMAKFESKTPIKIVVKQIRERSIVGEF-RGINVFVPISQWAEEVSSSIIGKVF----- 435 Query: 328 VEVMVLDIDEERRRISLG----LKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGL 383 EV ++DID +++ L+Q + QQ E+ + +G I I GI + Sbjct: 436 -EVEIVDIDTDKKIAFGSRKFLLRQAQEKKIQQAIESLDFNKDYDGVIAEIRQKGIVVNF 494 Query: 384 DGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNN 443 + G+ G V S+IS++ E+ + +K G+++ V+ +D ++++I L +K+ ED + Sbjct: 495 E-GLRGFVPASEISYSKRIEDVKKLFKVGEQVKVRVIDIDKQKKQIYLSIKKTQEDEWIK 553 Query: 444 WVALNKKGAIVTGKVTAVDAKGATVELAD-GVEGYLRASEASRDRVEDATLVLSVGDEVE 502 V G +V +VT V + G V + D ++G++ S + + VGD+++ Sbjct: 554 KVKNLYLGMLVDVEVTKVLSFGLVVWILDCELDGFVHVSNIPLGYNQRLHSLYKVGDKIK 613 Query: 503 AKFTGVDRKNRAISLSVRAKDEADEKDAI 531 AK +D + R I LS++ E +EK A Sbjct: 614 AKIIEIDEQRRRIGLSLKDLYEEEEKIAE 642 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 49/269 (18%), Positives = 111/269 (41%), Gaps = 15/269 (5%) Query: 272 KRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVM 331 G + G++ + V+I EG+++ +E+ + N N++ + N +++E + Sbjct: 299 AEIKRGEIVKGKIIKVEQDYLLVDIGYKAEGIIYKNEI-FKNANVNLKNIFNENEIIEAV 357 Query: 332 VLDIDEERRRISLG-LKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGL 390 V+ +E + L LK + + ++ +K I + I +G GI+ Sbjct: 358 VIKESDEEGNVVLSKLKADSIYGFNELMAKFESKTPIKIVVKQIRERSI-VGEFRGINVF 416 Query: 391 VHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQ----LAEDPFNNWVA 446 V +S + V+ + + ++ +D +++ K E + Sbjct: 417 VPISQWAEEVSSSIIGKVF------EVEIVDIDTDKKIAFGSRKFLLRQAQEKKIQQAIE 470 Query: 447 LNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEAS-RDRVEDATLVLSVGDEVEAKF 505 G + + KG V +G+ G++ ASE S R+ED + VG++V+ + Sbjct: 471 SLDFNKDYDGVIAEIRQKGIVVNF-EGLRGFVPASEISYSKRIEDVKKLFKVGEQVKVRV 529 Query: 506 TGVDRKNRAISLSVRAKDEADEKDAIATV 534 +D++ + I LS++ E + + + Sbjct: 530 IDIDKQKKQIYLSIKKTQEDEWIKKVKNL 558 Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 32/198 (16%), Positives = 75/198 (37%), Gaps = 9/198 (4%) Query: 358 AETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAA 417 +G+ V+GKI + + + + +G+++ ++I N A + + + I A Sbjct: 298 FAEIKRGEIVKGKIIKVEQDYLLVDIGYKAEGIIYKNEIFKN-ANVNLKNIFNENEIIEA 356 Query: 418 VVLQVDAERERISLG-VKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEG 476 VV++ E + L +K + FN +A + + V + + E G+ Sbjct: 357 VVIKESDEEGNVVLSKLKADSIYGFNELMAKFESKTPIKIVVKQIRERSIVGEFR-GINV 415 Query: 477 YLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVR-AKDEADEKDAIATVN 535 ++ S+ + + +G E + +D + S + +A EK + Sbjct: 416 FVPISQWAEEVSSSI-----IGKVFEVEIVDIDTDKKIAFGSRKFLLRQAQEKKIQQAIE 470 Query: 536 KQEDANFSNNAMAEAFKA 553 + + +AE + Sbjct: 471 SLDFNKDYDGVIAEIRQK 488 >UniRef50_Q6C430 YALI0E30217p n=1 Tax=Yarrowia lipolytica RepID=Q6C430_YARLI Length = 1567 Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats. Identities = 95/536 (17%), Positives = 194/536 (36%), Gaps = 45/536 (8%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIP-----------AEQFKNAQGE 59 +SL GSI+ G +V I +V + E+ + Sbjct: 84 QSLSLDNISVGSIILGRIVNIQSTACVVSLPNNLHGFVSCVQVSEALNAKIEEGEEFDLS 143 Query: 60 LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGG 119 ++ G V ++ + L + + + + + K G Sbjct: 144 DYVKEGQWVRASVVDTSNKR----LGLSLLPKDVNRDIEDSDIDANMALQVEVKSKEDKG 199 Query: 120 FTVE--LNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESE 177 + V + G + F+ D +G+ + V+++ + + + Sbjct: 200 YVVATGIKGKKGFI--------KDTDVELNKGQIVLACVLRISGRTITLDTEH-----TG 246 Query: 178 NSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVN 236 + + + + G V + + + GA V + G VD + ++ + S + Sbjct: 247 EAVRQLEDFSSAVAGTPVTVVTTDKRNNGAVVSVFGSVDATIDPFQGSFGLEEKTSSVAR 306 Query: 237 VGDEITVKVLKFDRERTRVSLG---LKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCF 293 V V L R+ L ED I + + G L +VT++ +G F Sbjct: 307 V-----VATLDRGASGKRMLLSALPHVVNLEDADPRIGEAFLPGQVLGVKVTHVVQHGLF 361 Query: 294 VEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP 353 VE+ E + G +H+S++ + VG ++ ++ + L +Q + Sbjct: 362 VELAENIPGFIHISKLADEKTDSTAD--YEVGQTLDARIIAFAPQDEMYVLSCEQSVMDA 419 Query: 354 WQQFAETHNKGDRVEGKIKSITD-FGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKG 412 + GD+VEG + GI + L I +V + + ++K G Sbjct: 420 KYIATSDLSAGDKVEGTVTRHLPKGGIIVALSSFITAVVPAAHLVDAKMA-NPELKFKIG 478 Query: 413 DEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALN-KKGAIVTGKVTAVDAKGATVELA 471 +I +L VD+ R+++ K L P +++++ + G I +G V V G VE Sbjct: 479 SKIKGRLLGVDSSGCRMTIK-KSLYNLPKDDFISYASEIGDIGSGTVVNVKPGGCVVEFW 537 Query: 472 DGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADE 527 D + +L A E S + D T VG V+ + ++ + +++ +S + A E Sbjct: 538 DNSQAWLPAGEVSEAFIADITKHCRVGQTVKIRILDINPEKQSMQVSCKLSKVAAE 593 Score = 170 bits (432), Expect = 1e-40, Method: Composition-based stats. Identities = 89/530 (16%), Positives = 182/530 (34%), Gaps = 53/530 (10%) Query: 10 EESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVD 69 ++L + G V G V +++ V V P + V Sbjct: 680 NKTLIKETPSVGQTVTGWVQNVNQHGVFVSF-AGVVGLAPQASLSD----DSYDKFQVVK 734 Query: 70 VALDAVEDGFGETL----LSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL- 124 + +V L+ + I+ Y + + G++ + +V L Sbjct: 735 GRVTSVNGDKFAVSIGKSLNGPAVNPVDPSISTIADYSEGKKTEGIVTAVLPSFVSVRLS 794 Query: 125 NGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQ 184 + + S ++ +D ++ V+ + + + + + Sbjct: 795 DNQNGRISLSQLETPVEKD------DKISVTVLGPSSQGDQI---------ELATNDVRL 839 Query: 185 LLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEITV 243 + NL+EG G+V T +V L + G L D+ VGD + V Sbjct: 840 SINNLEEGKAYPGVVVQSTADSIWVALSAYIVGRLDRADVQEADFADA-----VGDLVEV 894 Query: 244 KVLKFDRERTRVSLGLKQLGEDPWVAIAKRYP-----EGTKLTGRVTNLTDYGCFVEIEE 298 V E +V L Q E + P +G ++T RV + +V+ Sbjct: 895 SVCGI--EGDKVKLRGAQSEEKSEGFSEEALPASNGLQGAQVTARVKKIEVD--YVQCTI 950 Query: 299 GVEGLVHVSEMDW----TNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPW 354 V G + + ++ S V ++G+ V ++ + ++ +++ Sbjct: 951 NVNGKSSTATASLVDAVDDYSLKLSNVYDIGETVPAVI---CSAKEPYAICIRKNPEGVD 1007 Query: 355 QQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDE 414 + +GD+V+G + I GIF+ + GID V ++++S + + + +K G Sbjct: 1008 PLPSLPLKRGDKVKGVVTGIAA-GIFVAIGHGIDARVKITNLSDSFLMD-WKKYFKIGQI 1065 Query: 415 IAAVVLQV-DAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADG 473 + ++ D +SL + + D G G V G V + D Sbjct: 1066 VTGRIMGFSDKGLPDMSLKQRHMTGDKLIEGPQDLTVGQKYDGSVQRTTDYGVFVNIGD- 1124 Query: 474 VEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKD 523 G SE + V D + + + GD+V + + +SL ++A Sbjct: 1125 ATGLCHRSEIADTPVGDCSELFNSGDKVRVIVLKI--EGSKVSLGMKAAY 1172 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 90/530 (16%), Positives = 175/530 (33%), Gaps = 59/530 (11%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL 60 + +S L ++ + G I G VV + +V+ S++ +PA + A Sbjct: 497 IKKSLYNLPKDDFISYASEIGDIGSGTVVNVKPGGCVVEFWDNSQAWLPAGEVSEAFIAD 556 Query: 61 EIQ---VGDEVDVALDAVEDGFGETLL-SREKAKRHEAWITLEKAYEDAETVTGVINGKV 116 + VG V + + + + + E + + VTG I K Sbjct: 557 ITKHCRVGQTVKIRILDINPEKQSMQVSCKLSKVAAEHVSGAYEGISLGDLVTGKIIDK- 615 Query: 117 KGGFTVELN----GIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRA 172 +G F +E+ + +P +L+ + G +LE V+ +++ + Sbjct: 616 RGDFVIEMTVGDVDLTGVVPRNLLPPSHKK---LRVGDKLECVVLAKQPWMSSMTLGAHP 672 Query: 173 VIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPS 232 I + + E G V G V+N+ +G FV GV GL ++ Sbjct: 673 DIIKGYHN-KTLIKETPSVGQTVTGWVQNVNQHGVFVSFAGVVGLAPQASLSD------- 724 Query: 233 EIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKR-------YPEGTKLTGRVT 285 + + + +V + + + ++ + + P V Y EG K G VT Sbjct: 725 DSYDKFQVVKGRVTSVNGD--KFAVSIGKSLNGPAVNPVDPSISTIADYSEGKKTEGIVT 782 Query: 286 NLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLG 345 + V + + G + +S++ V D + V VL + +I L Sbjct: 783 AVLPSFVSVRLSDNQNGRISLSQL---------ETPVEKDDKISVTVLGPSSQGDQIELA 833 Query: 346 LKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEA 405 + + +G G + T I++ L I G + +D+ + Sbjct: 834 TNDVRLS-----INNLEEGKAYPGVVVQSTADSIWVALSAYIVGRLDRADVQEADFAD-- 886 Query: 406 VREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKK-----GAIVTGKVTA 460 GD + V + E +++ L Q E GA VT +V Sbjct: 887 ----AVGDLVEVSVCGI--EGDKVKLRGAQSEEKSEGFSEEALPASNGLQGAQVTARVKK 940 Query: 461 VDAKGATVELADG---VEGYLRASEASRDRVEDATLVLSVGDEVEAKFTG 507 ++ + +A D + V +G+ V A Sbjct: 941 IEVDYVQCTINVNGKSSTATASLVDAVDDYSLKLSNVYDIGETVPAVICS 990 Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats. Identities = 67/391 (17%), Positives = 129/391 (32%), Gaps = 41/391 (10%) Query: 170 RRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMA---- 224 + + S+ A + L+N+ G + G + N+ V L + G + ++ Sbjct: 72 AKQAVTSDIVAIQSLSLDNISVGSIILGRIVNIQSTACVVSLPNNLHGFVSCVQVSEALN 131 Query: 225 ----WKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKL 280 S+ V G + V D R+ L L + L Sbjct: 132 AKIEEGEEFDLSDYVKEGQWVRASV--VDTSNKRLGLSL-LPKDVNRDIEDSDIDANMAL 188 Query: 281 TGRVTNLTDYGCFVEIE-EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEER 339 V + D G V +G +G + +N G +V VL I Sbjct: 189 QVEVKSKEDKGYVVATGIKGKKGFI-----------KDTDVELNKGQIVLACVLRI--SG 235 Query: 340 RRISL-GLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISW 398 R I+L +A + + G V + G + + G +D + S+ Sbjct: 236 RTITLDTEHTGEAVRQLEDFSSAVAGTPVTVVTTDKRNNGAVVSVFGSVDATIDPFQGSF 295 Query: 399 NVAGEEAVREYKKGDEIAAVVLQVDA--ERERISLG---VKQLAEDPFNNWVALNKKGAI 453 + + + +A VV +D +R+ L ED G + Sbjct: 296 GLEEKTSS--------VARVVATLDRGASGKRMLLSALPHVVNLEDADPRIGEAFLPGQV 347 Query: 454 VTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNR 513 + KVT V G VELA+ + G++ S+ + ++ + VG ++A+ ++ Sbjct: 348 LGVKVTHVVQHGLFVELAENIPGFIHISKLADEKTDSTAD-YEVGQTLDARIIAFAPQDE 406 Query: 514 AISLSVRAKDEADEKDAIATVNKQEDANFSN 544 LS + A + ++ + + Sbjct: 407 MYVLSCEQSVMDAKYIATSDLSAGDKVEGTV 437 >UniRef50_D0NSW6 rRNA biogenesis protein rrp5 n=1 Tax=Phytophthora infestans T30-4 RepID=D0NSW6_PHYIN Length = 1882 Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 91/552 (16%), Positives = 184/552 (33%), Gaps = 46/552 (8%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDV-VLVDAGLKSESAIPAEQFKNAQGEL 60 + L R G ++ G V I +++ K + + + + Sbjct: 66 KDDLKAAKATLLTFKALRKGMLLLGCVRQITDGQDLMISLPNKLNGTVALNECSD---DT 122 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 +VG V + A + + ++ ++ G Sbjct: 123 LFKVGQFVPCVVLATGKTGKRKQIHLSLRTSLLHAELSPGSLTKGTSLHATVSSVEDHGA 182 Query: 121 TVELN--GIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNV-VVSRRAVIESE 177 V L G+ AF+P + +G+ L V+ ++ N V R+ + Sbjct: 183 IVNLGIRGVHAFVPRKELTT------PAHKGQHLLVNVVSMNMHTNTATVTIDRSQVVKA 236 Query: 178 NSAERDQLLENLQEGMEVKGIVKNLTDYGAFVD-LGGVDGLLHITDMAWKRVKHPSEIVN 236 + L+ L GM + V+++ + G V L + M+ + E Sbjct: 237 VTRGDSFTLKQLVPGMLLNVRVEDVLENGLSVTFLSFFSATVEQNHMSLPCERGWEESYR 296 Query: 237 VGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKL-TGRVTNL-TDYGCFV 294 G + +++ D +++L + + G + + + G + Sbjct: 297 KGMKARARIVSIDYIAKQITLSM-APHVVHLQVPESLFSAGDIIEEATIERIDVGIGMLL 355 Query: 295 EI---EEGVE---------------------GLVHVSEMDWTNKNIHPSKVVNVGDVVEV 330 + +E V+ G VH+S + + K VG ++ Sbjct: 356 SLKSQDEDVDMEDASDKKENTTNAKWKAFAPGYVHISNVSD-KRVDKLEKKFTVGSSIKC 414 Query: 331 MVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGL 390 VL S+ + + + G +V GKI S+ +GI + + G+ GL Sbjct: 415 RVLGFSPFDAVASVSCTEHSISQTVLRHKDLKPGTKVNGKILSVESWGILMEISEGVRGL 474 Query: 391 VHLSDISWNVAGEEAVR-EYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNK 449 V + + ++A +YK G +A VL VD + + L +K ++ K Sbjct: 475 VTSQHMPAFLLNKKANSGKYKAGKTTSARVLHVDLDANKTYLTMKSGLLSSDLPVLSSFK 534 Query: 450 K---GAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFT 506 + G I G +T + G V + V G + + + +E+ G V+A+ T Sbjct: 535 EATMGLIAHGFITKIGEYGVIVTFYNNVYGLVPMAVLQQAGIENLEEAYVPGQVVKARVT 594 Query: 507 GVDRKNRAISLS 518 D + + LS Sbjct: 595 RCDANRKRLMLS 606 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 95/567 (16%), Positives = 200/567 (35%), Gaps = 62/567 (10%) Query: 7 QLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGL-KSESAIPAEQFKNAQGELEIQVG 65 L L G+ + V +++ +V+ G+ + +P ++ + G Sbjct: 153 SLLHAELSPGSLTKGTSLHATVSSVEDHGAIVNLGIRGVHAFVPRKELTTPAHK-----G 207 Query: 66 DEVDVALDAVEDGFGETLLSREKAKRHEAWI----TLEKAYEDAETVTGVINGKVKGGFT 121 + V + ++ ++ ++++ +A K + + ++ G + Sbjct: 208 QHLLVNVVSMNMHTNTATVTIDRSQVVKAVTRGDSFTLKQLVPGMLLNVRVEDVLENGLS 267 Query: 122 VEL-NGIRAFLPGSLVDVRPVR--DTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 V + A + + + + R + + +G + +++ +D + + + + + Sbjct: 268 VTFLSFFSATVEQNHMSLPCERGWEESYRKGMKARARIVSID-----YIAKQITLSMAPH 322 Query: 179 SAERDQLLENLQEGMEVK-GIVKNLT-DYGAFVDLGGVD--------------------- 215 G ++ ++ + G + L D Sbjct: 323 VVHLQVPESLFSAGDIIEEATIERIDVGIGMLLSLKSQDEDVDMEDASDKKENTTNAKWK 382 Query: 216 ----GLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIA 271 G +HI++++ KRV + VG I +VL F S+ + V Sbjct: 383 AFAPGYVHISNVSDKRVDKLEKKFTVGSSIKCRVLGFSPFDAVASVSCTEHSISQTVLRH 442 Query: 272 KRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSK-VVNVGDVVEV 330 K GTK+ G++ ++ +G +EI EGV GLV M N + G Sbjct: 443 KDLKPGTKVNGKILSVESWGILMEISEGVRGLVTSQHMPAFLLNKKANSGKYKAGKTTSA 502 Query: 331 MVLDIDEERRRISLGLKQCKANPWQQFAETHNK---GDRVEGKIKSITDFGIFIGLDGGI 387 VL +D + + L +K + + + G G I I ++G+ + + Sbjct: 503 RVLHVDLDANKTYLTMKSGLLSSDLPVLSSFKEATMGLIAHGFITKIGEYGVIVTFYNNV 562 Query: 388 DGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVAL 447 GLV ++ + E Y G + A V + DA R+R+ L + N A Sbjct: 563 YGLVPMAVL-QQAGIENLEEAYVPGQVVKARVTRCDANRKRLMLSFDTTSNSSGNKPTAA 621 Query: 448 NKKGAIVTG------KVTAVDAKGATVELADGVEGYLRASEASRDR-----VEDATLVLS 496 + + + G K+T VD V+ DG+EG L + + V+ S Sbjct: 622 PEIASKLVGTKITNVKITDVDTTCFRVQTKDGMEGVLPFVQLTDFPRNTSLVDKIVKRFS 681 Query: 497 VGDEVEAKFTGVDRK-NRAISLSVRAK 522 GD + V ++ + + LS + Sbjct: 682 AGDVISEPLLVVSQESDGVLMLSKKPL 708 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 84/563 (14%), Positives = 184/563 (32%), Gaps = 62/563 (11%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA---QGELEIQVGDE 67 +S + PG ++ V + ++ + V + + E + G + Sbjct: 241 DSFTLKQLVPGMLLNVRVEDVLENGLSVTFLSFFSATVEQNHMSLPCERGWEESYRKGMK 300 Query: 68 VDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG-GFTVELNG 126 + +++ + LS H + I G G + L Sbjct: 301 ARARIVSIDYIAKQITLSMAPHVVHLQVPESLFS-AGDIIEEATIERIDVGIGMLLSLKS 359 Query: 127 IR-------------------------AFLPGSLVDVRPVRDTLHL--EGKELEFKVIKL 159 ++ S V + V G ++ +V+ Sbjct: 360 QDEDVDMEDASDKKENTTNAKWKAFAPGYVHISNVSDKRVDKLEKKFTVGSSIKCRVLGF 419 Query: 160 DQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLL 218 VS + ++ ++L+ G +V G + ++ +G +++ GV GL+ Sbjct: 420 SPFDAVASVSCT----EHSISQTVLRHKDLKPGTKVNGKILSVESWGILMEISEGVRGLV 475 Query: 219 HITDMAWKRVKHPSE--IVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPE 276 M + + G + +VL D + + L +K + + + E Sbjct: 476 TSQHMPAFLLNKKANSGKYKAGKTTSARVLHVDLDANKTYLTMKSGLLSSDLPVLSSFKE 535 Query: 277 ---GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVL 333 G G +T + +YG V V GLV ++ + + + G VV+ V Sbjct: 536 ATMGLIAHGFITKIGEYGVIVTFYNNVYGLVPMAVLQQAG-IENLEEAYVPGQVVKARVT 594 Query: 334 DIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEG-KIKSIT----DFGIF-IGLDGGI 387 D R+R+ L + + ++ G KI ++ D F + G+ Sbjct: 595 RCDANRKRLMLSFDTTSNSSGNKPTAAPEIASKLVGTKITNVKITDVDTTCFRVQTKDGM 654 Query: 388 DGLVHLSDISWNVAG----EEAVREYKKGDEIAAVVLQVDAE-RERISLGVKQ------L 436 +G++ ++ ++ V+ + GD I+ +L V E + L K Sbjct: 655 EGVLPFVQLTDFPRNTSLVDKIVKRFSAGDVISEPLLVVSQESDGVLMLSKKPLLLEFAS 714 Query: 437 AEDPFNNWVALNKKGAIVTGKVTAV-DAKGATVELADGVEGYLRASEASRDRVEDA-TLV 494 + ++ A++ G VT+V +KG V+ + + V + Sbjct: 715 RKAILPRTFRDVQENAVLIGYVTSVNVSKGVFVKFLNNLVAVAPKGFLKEQFVGQIDEEM 774 Query: 495 LSVGDEVEAKFTGVDRKNRAISL 517 +G+ V +D++ + + Sbjct: 775 FEIGETVTCSVAKMDKEKKQFVV 797 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 107/545 (19%), Positives = 193/545 (35%), Gaps = 79/545 (14%) Query: 14 KEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVD-VAL 72 + + G+I+ GV+ I ++ + + + +V V V + Sbjct: 1038 TQEDLVLGNILTGVISGISENS---------------MEIRVETHKKAGKVRATVSIVDV 1082 Query: 73 DAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLP 132 + +++ G Y TVTG + G N ++ P Sbjct: 1083 NGIDEKSG--------------HSHPFDRYSVNTTVTGRVIAVSAKGA----NKLK---P 1121 Query: 133 GSLVDVRPVRDTLHLEGKELEFKVIKL--DQKRNNVVVSRRAVIESENSAERDQLLENLQ 190 S + +L + + D+K +V R L+ Sbjct: 1122 VSE------ENPAKFHALQLSLRSEDVAGDEKVEDVQRFVRPDWLE-----GSAGRALLK 1170 Query: 191 EGMEVKGIVKNLTDYGAFVDL-GGVDGLLH--ITDMAWKRVKHPSEIVNVGDEITVKVLK 247 EG V+G+V + V L G V G L V+ VG + VL+ Sbjct: 1171 EGNSVEGVVSDQDADHLTVKLSGNVTGTLSCVEVSEDVDVVREFQGKYPVGKRVKCFVLQ 1230 Query: 248 FDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVT----NLTDYGCFVEIEEGVEGL 303 D E+ V L + A+ GT + G ++ + V+I G Sbjct: 1231 VDDEKKTVDLSVIHASSAQSQAV---VKSGTIVNGVISTKKSAIRPPSIMVQIGVHTFGR 1287 Query: 304 VHVSEMDWTNKNIHPS-KVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETH- 361 V ++E+ +N +VG VV +VL I L L++ + + +A+ Sbjct: 1288 VCITELQTKWENDMLELPKFSVGKVVRCVVLS--TSNNHIDLSLREDALDSPKAYAKKSS 1345 Query: 362 -----NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIA 416 N GD V + + T G F+ +D V L D+S + ++ ++ G +A Sbjct: 1346 KSAERNVGDLVPAIVATTTSSGCFVRVDRHTTARVMLRDLSDDFV-KDPQTQFPSGKLVA 1404 Query: 417 AVVLQVDAERERISLGVK--QLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELAD-G 473 V + + L +K +++D + K+G V G +T V G V + Sbjct: 1405 GRVTK--KSDRGLELSLKASVVSDDVSVFKWSDLKEGLTVKGTITKVQTYGVFVRIEKTT 1462 Query: 474 VEGYLRASEASRDRVEDATL-VLSVGDEVEAKFTGVDRKNRAISLSVRAKD-EADEKDAI 531 + G SE + ++V + S GD V+AK V ++R +S ++ EA K + Sbjct: 1463 ISGLCHISEVADEKVTQPLDQIFSEGDYVKAKVLKV--EDRRVSFGLKPSYFEAPVKKPV 1520 Query: 532 ATVNK 536 +K Sbjct: 1521 IKRSK 1525 Score = 148 bits (375), Expect = 4e-34, Method: Composition-based stats. Identities = 74/360 (20%), Positives = 130/360 (36%), Gaps = 18/360 (5%) Query: 9 FEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIP-----AEQFKNAQGELEIQ 63 E S + G+ V GVV D D + V + + + + + Sbjct: 1160 LEGSAGRALLKEGNSVEGVVSDQDADHLTVKLSGNVTGTLSCVEVSEDVDVVREFQGKYP 1219 Query: 64 VGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVE 123 VG V + V+D LS A ++ ++ ++ + V+ Sbjct: 1220 VGKRVKCFVLQVDDEKKTVDLSVIHASSAQSQAVVKSGTIVNGVISTKKSAIRPPSIMVQ 1279 Query: 124 LNGIR-AFLPGSLVDVRPVRDTLHL----EGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 + + + + + D L L GK + V+ ++ + A+ + Sbjct: 1280 IGVHTFGRVCITELQTKWENDMLELPKFSVGKVVRCVVLSTSNNHIDLSLREDALDSPKA 1339 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNV 237 A++ G V IV T G FV + + + D++ VK P Sbjct: 1340 YAKKSSKSAERNVGDLVPAIVATTTSSGCFVRVDRHTTARVMLRDLSDDFVKDPQTQFPS 1399 Query: 238 GDEITVKVLKFDRERTRVSLGLKQ--LGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVE 295 G + +V K + + L LK + +D V EG + G +T + YG FV Sbjct: 1400 GKLVAGRVTK--KSDRGLELSLKASVVSDDVSVFKWSDLKEGLTVKGTITKVQTYGVFVR 1457 Query: 296 IEE-GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPW 354 IE+ + GL H+SE+ ++ + GD V+ VL + E RR+S GLK Sbjct: 1458 IEKTTISGLCHISEVADEKVTQPLDQIFSEGDYVKAKVLKV--EDRRVSFGLKPSYFEAP 1515 Score = 134 bits (338), Expect = 8e-30, Method: Composition-based stats. Identities = 62/414 (14%), Positives = 146/414 (35%), Gaps = 29/414 (7%) Query: 46 SAIPAEQFKNAQG---ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAY 102 + + + E + VG + + +S + + + + Sbjct: 387 GYVHISNVSDKRVDKLEKKFTVGSSIKCRVLGFSPFDAVASVSCTEHSISQTVLRHKD-L 445 Query: 103 EDAETVTGVINGKVKGGFTVEL-NGIRAFLPGSLVDV----RPVRDTLHLEGKELEFKVI 157 + V G I G +E+ G+R + + + + GK +V+ Sbjct: 446 KPGTKVNGKILSVESWGILMEISEGVRGLVTSQHMPAFLLNKKANSGKYKAGKTTSARVL 505 Query: 158 KLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDG 216 +D N ++ ++ + S + + G+ G + + +YG V V G Sbjct: 506 HVDLDANKTYLTMKSGLLSSDLPVLSS-FKEATMGLIAHGFITKIGEYGVIVTFYNNVYG 564 Query: 217 LLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPE 276 L+ + + +++ E G + +V + D R R+ L Sbjct: 565 LVPMAVLQQAGIENLEEAYVPGQVVKARVTRCDANRKRLMLSFDTTSNSSGNKPTAAPEI 624 Query: 277 GTKLTG-RVTNLT----DYGCF-VEIEEGVEGLVHVSEMDWTNK----NIHPSKVVNVGD 326 +KL G ++TN+ D CF V+ ++G+EG++ ++ + K + GD Sbjct: 625 ASKLVGTKITNVKITDVDTTCFRVQTKDGMEGVLPFVQLTDFPRNTSLVDKIVKRFSAGD 684 Query: 327 VVEVMVLDIDEE-RRRISLGLKQC------KANPWQQFAETHNKGDRVEGKIKSIT-DFG 378 V+ +L + +E + L K + + + + G + S+ G Sbjct: 685 VISEPLLVVSQESDGVLMLSKKPLLLEFASRKAILPRTFRDVQENAVLIGYVTSVNVSKG 744 Query: 379 IFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLG 432 +F+ + + + G+ ++ G+ + V ++D E+++ +G Sbjct: 745 VFVKFLNNLVAVAPKGFLKEQFVGQIDEEMFEIGETVTCSVAKMDKEKKQFVVG 798 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 73/446 (16%), Positives = 156/446 (34%), Gaps = 53/446 (11%) Query: 142 RDTLHLEGKELEFKVI--KLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIV 199 DTL G+ + V+ KR + +S R + + +L +G + V Sbjct: 120 DDTLFKVGQFVPCVVLATGKTGKRKQIHLSLRTSLLHAELSPG-----SLTKGTSLHATV 174 Query: 200 KNLTDYGAFVDLG--GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSL 257 ++ D+GA V+LG GV + ++ + G + V V+ + ++ Sbjct: 175 SSVEDHGAIVNLGIRGVHAFVPRKELTTPA--------HKGQHLLVNVVSMNMHTNTATV 226 Query: 258 GLKQLGEDPW-----VAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWT 312 + + K+ G L RV ++ + G V V + M Sbjct: 227 TIDRSQVVKAVTRGDSFTLKQLVPGMLLNVRVEDVLENGLSVTFLSFFSATVEQNHMSLP 286 Query: 313 NKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVE-GKI 371 + + G ++ ID ++I+L + + Q + GD +E I Sbjct: 287 CE-RGWEESYRKGMKARARIVSIDYIAKQITLSMAPHVVH-LQVPESLFSAGDIIEEATI 344 Query: 372 KSITDF-GIFIGL---DGGID---------------------GLVHLSDISWNVAGEEAV 406 + I G+ + L D +D G VH+S++S ++ Sbjct: 345 ERIDVGIGMLLSLKSQDEDVDMEDASDKKENTTNAKWKAFAPGYVHISNVSDKRV-DKLE 403 Query: 407 REYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGA 466 +++ G I VL S+ + + K G V GK+ +V++ G Sbjct: 404 KKFTVGSSIKCRVLGFSPFDAVASVSCTEHSISQTVLRHKDLKPGTKVNGKILSVESWGI 463 Query: 467 TVELADGVEGYLRASEASRDRVEDA--TLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDE 524 +E+++GV G + + + + G A+ VD L++++ Sbjct: 464 LMEISEGVRGLVTSQHMPAFLLNKKANSGKYKAGKTTSARVLHVDLDANKTYLTMKSGLL 523 Query: 525 ADEKDAIATVNKQEDANFSNNAMAEA 550 + + +++ + ++ + + Sbjct: 524 SSDLPVLSSFKEATMGLIAHGFITKI 549 Score = 97.3 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 91/642 (14%), Positives = 187/642 (29%), Gaps = 122/642 (19%) Query: 14 KEIETRPGSIVRGVVVAID-KDVVLVDAGLKSESAIPA----EQFKNAQGELEIQVGDEV 68 + + +++ G V +++ V V + P EQF E ++G+ V Sbjct: 722 TFRDVQENAVLIGYVTSVNVSKGVFVKFLNNLVAVAPKGFLKEQFVGQIDEEMFEIGETV 781 Query: 69 DVALDAVEDGFGETLLS-------------------------REKAKRHEAWITLEKAYE 103 ++ ++ + ++ RE+A A + + Sbjct: 782 TCSVAKMDKEKKQFVVGFQQSNFVLPTNSTNKARPAFFQAYLREQASVRNAAEVKKSPFA 841 Query: 104 DAETVTGVINGKVKGGFTVELNG----IRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKL 159 ++ G G L + +P ++ EG ++ + Sbjct: 842 LGKSEKTEFVGVRPYGAVFALETDEETVTVLVP-----SVTEKNNEWDEGDTVKLLLTDY 896 Query: 160 DQKRNNVVVSRRAVIESENSAERDQLLENLQEG-MEVKGIVKNLTD--YGAFVDLGGVD- 215 D +N + + S + + + ++ G V ++ A V Sbjct: 897 DFSKNVYYGAADESLVKSGSKKSRKQKQRVKTGGKIAAATVLAVSPTEKYAVVSFPDPQN 956 Query: 216 ------GLLHITDMAWKRVKHPSEIVNVGDEITVKVLK-----------FDRERT----- 253 G++ + D + VG I +V++ FD Sbjct: 957 ADLLQFGVVQLCDFWCPSQTSSQLGIEVGASIECRVVQPSLKSVSNSTPFDDLALLALEE 1016 Query: 254 -----RVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG------ 302 + ++ + G LTG ++ +++ + +E + Sbjct: 1017 EELVAKTKASSRKTSSKVPKYTQEDLVLGNILTGVISGISENSMEIRVETHKKAGKVRAT 1076 Query: 303 --LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEER---------------RRISLG 345 +V V+ +D + + HP +V V V+ + + + L Sbjct: 1077 VSIVDVNGIDEKSGHSHPFDRYSVNTTVTGRVIAVSAKGANKLKPVSEENPAKFHALQLS 1136 Query: 346 LKQCKAN-----------------PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGID 388 L+ +G+ VEG + + + L G + Sbjct: 1137 LRSEDVAGDEKVEDVQRFVRPDWLEGSAGRALLKEGNSVEGVVSDQDADHLTVKLSGNVT 1196 Query: 389 GLVH-LSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVAL 447 G + + E +Y G + VLQVD E++ + L + A+ Sbjct: 1197 GTLSCVEVSEDVDVVREFQGKYPVGKRVKCFVLQVDDEKKTVDLS---VIHASSAQSQAV 1253 Query: 448 NKKGAIVTGKVT----AVDAKGATVELADGVEGYLRASEASRDRVEDATL--VLSVGDEV 501 K G IV G ++ A+ V++ G + +E D SVG V Sbjct: 1254 VKSGTIVNGVISTKKSAIRPPSIMVQIGVHTFGRVCITELQTKWENDMLELPKFSVGKVV 1313 Query: 502 EAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFS 543 N I LS+R K +K + N Sbjct: 1314 RCVVLS--TSNNHIDLSLREDALDSPKAYAKKSSKSAERNVG 1353 >UniRef50_C1NA95 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1NA95_9CHLO Length = 2229 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 104/601 (17%), Positives = 183/601 (30%), Gaps = 97/601 (16%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN-------------AQ 57 + PG +V V A+ D + V+ + I A + Sbjct: 335 DYTSMQSLLPGMLVNARVRAVLSDGISVNFMTYFTATIDAFHLGDGKGTDGKHLNGPTPD 394 Query: 58 GELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAY--------------E 103 +VGD + V+ L+ ++++ + + Sbjct: 395 VSKTHKVGDRCRARVLFVDADAKRIGLTLRPHLVSPQAVSVQPSSTETGGDPLSHLNLPK 454 Query: 104 DAETVTGVINGKVKGGFTVELN-----------------GIR----------AFLPGSLV 136 + I +V V L G + ++ S Sbjct: 455 PGTSYDAAIVRRVDANVGVLLELPPSGAAAAPTDDESRMGKQSYSPPKGACLGYVHISDA 514 Query: 137 DVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGME 194 + G + +VI S + + + L+ L GM+ Sbjct: 515 TDDHIERLEKKFKVGATVRARVIGRRVVDGVATASCKKTVVEQPFL----SLDELTPGMK 570 Query: 195 VKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERT 253 VKG V + YGA + L GV LL ++ + + V G + +VL D R+ Sbjct: 571 VKGEVVAVEPYGAVIKLAPGVKALLPPHHVSDIPGRTTNAKVCPGARLNFRVLSVDVARS 630 Query: 254 RVSLGLKQL-----GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSE 308 R ++ K+ + G G VT + YG FV + + GL + Sbjct: 631 RATVTRKKTILNSDLDVIATMEDATRAGGATTHGVVTGVEPYGVFVSLYGALRGLAGAQD 690 Query: 309 MDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQ----------------CKAN 352 + P++ VG V V+ D ++ L L Sbjct: 691 LGLA-PGQTPTEAFQVGQCVRARVIRADNGPGKLKLSLAPGGSGDGVVLHDDEGGGGGGG 749 Query: 353 PWQQFAETHNKGDRVE-GKIKSI-TDFG-IFIGLDGGIDGLVHLSDISWNVAGEEAVREY 409 G +E +K + D G + + L GG+ G++ + +S + A+ Sbjct: 750 GRLDDVGAPPPGTIIESAVVKRVDADTGNVLVTLPGGVPGVITAAHVSDHPVTGAALVAT 809 Query: 410 KKGDEIAAVVLQVDAERERISLGVKQL-----AEDPFNNWVALNKKGAIVTGKVTAVDAK 464 D+ ++ ++A+ R L K D VA GA G V + Sbjct: 810 YAPDDAIGPLVALEAKPRRSILSRKTSLVTAARSDALPASVADVVVGASYPGYVASATQN 869 Query: 465 -GATVELADGVEGYLRASEA---SRDRVEDATLVLSVGDEVEAKFTGVDR--KNRAISLS 518 G V + G S+ +R D + G V A+ T VD +SLS Sbjct: 870 AGVFVRFLGRLTGLAPPSQLVPGARGGDADPEECFAPGQSVRARVTAVDATVDPPRLSLS 929 Query: 519 V 519 + Sbjct: 930 L 930 Score = 182 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 101/652 (15%), Positives = 179/652 (27%), Gaps = 145/652 (22%) Query: 6 AQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---------- 55 + F E L+ R G+ + GVVV ++ + + ++ + + Sbjct: 83 ERTFVELLRHKTLRVGTKLMGVVVDVNDAGMSLSLPNGLRGSVTRAEASDAFVAAKKKKK 142 Query: 56 ----------------------------------------AQGELEIQVGDEVDVALDAV 75 +VG + + Sbjct: 143 TTKMTKMKKKTADSSESESESESESDESDSDDDDEALTNAEPLAALFKVGQILRAVVVRS 202 Query: 76 EDGF---GETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIR---- 128 G LS ++ + + A D V + G GF + GI Sbjct: 203 GKGKSGGKRIDLSTRLSRVCDGVA--KDALVDGAAVPACVTGVEAHGFVLNF-GIDDAPI 259 Query: 129 AFLPGSLVDVRPVRDTLHLEGKELEFKV------------------------IKLDQKRN 164 FLP V G L+ + + + + Sbjct: 260 GFLPRKSVRAEMASSLAR--GAILDVVINASAGPGGDGGNGEDGGGKEKKRALVTNSRVV 317 Query: 165 NVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDM 223 + V + +++L GM V V+ + G V+ + + Sbjct: 318 QCTADAKRVSSAVTRESDYTSMQSLLPGMLVNARVRAVLSDGISVNFMTYFTATIDAFHL 377 Query: 224 AWKR----------VKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKR 273 + S+ VGD +VL D + R+ L L+ P + Sbjct: 378 GDGKGTDGKHLNGPTPDVSKTHKVGDRCRARVLFVDADAKRIGLTLRPHLVSPQAVSVQP 437 Query: 274 ---------------YPEGTKLTGRVTNLTD--YGCFVEIEE--------------GVE- 301 GT + D G +E+ G + Sbjct: 438 SSTETGGDPLSHLNLPKPGTSYDAAIVRRVDANVGVLLELPPSGAAAAPTDDESRMGKQS 497 Query: 302 ---------GLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN 352 G VH+S+ + K VG V V+ + K+ Sbjct: 498 YSPPKGACLGYVHISD-ATDDHIERLEKKFKVGATVRARVIGRRVVDGVATASCKKTVVE 556 Query: 353 PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKG 412 + G +V+G++ ++ +G I L G+ L+ +S + G + G Sbjct: 557 QPFLSLDELTPGMKVKGEVVAVEPYGAVIKLAPGVKALLPPHHVSD-IPGRTTNAKVCPG 615 Query: 413 DEIAAVVLQVDAERERISLGVKQ-----LAEDPFNNWVALNKKGAIVTGKVTAVDAKGAT 467 + VL VD R R ++ K+ + A GA G VT V+ G Sbjct: 616 ARLNFRVLSVDVARSRATVTRKKTILNSDLDVIATMEDATRAGGATTHGVVTGVEPYGVF 675 Query: 468 VELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSV 519 V L + G A + + T VG V A+ D + LS+ Sbjct: 676 VSLYGALRGLAGAQDLGLAPGQTPTEAFQVGQCVRARVIRADNGPGKLKLSL 727 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 80/364 (21%), Positives = 127/364 (34%), Gaps = 53/364 (14%) Query: 212 GGVDGLLHITDMAWKRV---KHPSEIVNVGDEITVKVLKF--DRERTRVSLGLKQLGEDP 266 GV + + + +E VG+ I V D R + + L+ + Sbjct: 1371 PGVTCRIPRVETGDSASVLKRPLTERFAVGETIEGGVAMVAGDVARRKAIVTLRAAKK-- 1428 Query: 267 WVAIAKRYPEGTKLTGRVTNL--TDYGCFVEIEEGVEGLVHVSEMDWT----NKNIHPSK 320 + G KL G VT + G FV++ G VHV+++ P K Sbjct: 1429 -----RDVVAGAKLGGIVTKVLSHGGGVFVQLNGRQRGRVHVTDLSDAPGSAESQGEPWK 1483 Query: 321 VVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAE---------THNKGDRVEGKI 371 GD V+V VL +DE+ I L + + G +V G + Sbjct: 1484 KYAPGDAVDVRVLRVDEDDGEIDLSTRASDMKRARTGRYDKLAIETCDQLTPGTKVAGFV 1543 Query: 372 KSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISL 431 K T G F+ L +D V L ++S ++ + + KG + VL VDAE ER+ + Sbjct: 1544 KQCTKGGCFVALGRTVDARVKLCNLSNEFV-DDPPKAFPKGALVTGTVLSVDAENERVEI 1602 Query: 432 GVKQLAEDP-------FNNWVALNKKGAIVTGKVTAVDAKGATVELAD--GVEGYLRASE 482 ++ D +GA++ G V V G V L D G G S Sbjct: 1603 TLRADGGDGGGAAAVNAPPTGDAPDEGAVLMGTVRRVQTYGVFVTLDDCGGRSGLCHISA 1662 Query: 483 ASRDRVEDATL-VLSVGDEVEAK---------------FTGVDRKNRAISLSVRAKDEAD 526 + R++D + G+ V K V+ ISL ++ Sbjct: 1663 FADARIDDGLDAHVRAGERVRVKGAFYLTLVPIRPRWRVLKVEVDTGRISLGMKPSLFTA 1722 Query: 527 EKDA 530 D Sbjct: 1723 SDDE 1726 Score = 161 bits (408), Expect = 6e-38, Method: Composition-based stats. Identities = 74/331 (22%), Positives = 129/331 (38%), Gaps = 55/331 (16%) Query: 148 EGKELEFKVIKL--DQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDY 205 G+ +E V + D R +V+ RA + ++ G ++ GIV + + Sbjct: 1399 VGETIEGGVAMVAGDVARRKAIVTLRAAKK-----------RDVVAGAKLGGIVTKVLSH 1447 Query: 206 G--AFVDLGG-VDGLLHITDMAW-----KRVKHPSEIVNVGDEITVKVLKFDRERTRVSL 257 G FV L G G +H+TD++ + P + GD + V+VL+ D + + L Sbjct: 1448 GGGVFVQLNGRQRGRVHVTDLSDAPGSAESQGEPWKKYAPGDAVDVRVLRVDEDDGEIDL 1507 Query: 258 GLKQLG---------EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSE 308 + + + + GTK+ G V T GCFV + V+ V + Sbjct: 1508 STRASDMKRARTGRYDKLAIETCDQLTPGTKVAGFVKQCTKGGCFVALGRTVDARVKLCN 1567 Query: 309 MDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNK----- 363 + P K G +V VL +D E R+ + L+ + A Sbjct: 1568 LSNE-FVDDPPKAFPKGALVTGTVLSVDAENERVEITLRADGGDGGGAAAVNAPPTGDAP 1626 Query: 364 --GDRVEGKIKSITDFGIFIGLD--GGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAV- 418 G + G ++ + +G+F+ LD GG GL H+S + + + G+ + Sbjct: 1627 DEGAVLMGTVRRVQTYGVFVTLDDCGGRSGLCHISAFADARIDDGLDAHVRAGERVRVKG 1686 Query: 419 --------------VLQVDAERERISLGVKQ 435 VL+V+ + RISLG+K Sbjct: 1687 AFYLTLVPIRPRWRVLKVEVDTGRISLGMKP 1717 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 51/246 (20%), Positives = 91/246 (36%), Gaps = 26/246 (10%) Query: 294 VEIEEGVEGLVHVSEMDWTNKNIH--PSKVVNVGDVVE--VMVLDIDEERRRISLGLKQC 349 V + GV + E + + ++ VG+ +E V ++ D RR+ + L+ Sbjct: 1367 VSLAPGVTCRIPRVETGDSASVLKRPLTERFAVGETIEGGVAMVAGDVARRKAIVTLRAA 1426 Query: 350 KANPWQQFAETHNKGDRVEGKIKSITD--FGIFIGLDGGIDGLVHLSDISWNV----AGE 403 K G ++ G + + G+F+ L+G G VH++D+S + Sbjct: 1427 KKR-------DVVAGAKLGGIVTKVLSHGGGVFVQLNGRQRGRVHVTDLSDAPGSAESQG 1479 Query: 404 EAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFN---------NWVALNKKGAIV 454 E ++Y GD + VL+VD + I L + G V Sbjct: 1480 EPWKKYAPGDAVDVRVLRVDEDDGEIDLSTRASDMKRARTGRYDKLAIETCDQLTPGTKV 1539 Query: 455 TGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRA 514 G V G V L V+ ++ S + V+D G V VD +N Sbjct: 1540 AGFVKQCTKGGCFVALGRTVDARVKLCNLSNEFVDDPPKAFPKGALVTGTVLSVDAENER 1599 Query: 515 ISLSVR 520 + +++R Sbjct: 1600 VEITLR 1605 Score = 79.6 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 32/154 (20%), Positives = 54/154 (35%), Gaps = 18/154 (11%) Query: 381 IGLDGGIDGLVHLSDI--SWNVAGEEAVREYKKGDEIAAVVLQV--DAERERISLGVKQL 436 + L G+ + + S +V + G+ I V V D R + + ++ Sbjct: 1367 VSLAPGVTCRIPRVETGDSASVLKRPLTERFAVGETIEGGVAMVAGDVARRKAIVTLRAA 1426 Query: 437 AEDPFNNWVALNKKGAIVTGKVTAV--DAKGATVELADGVEGYLRASEASRDRVE----- 489 + GA + G VT V G V+L G + ++ S Sbjct: 1427 KKR-------DVVAGAKLGGIVTKVLSHGGGVFVQLNGRQRGRVHVTDLSDAPGSAESQG 1479 Query: 490 DATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKD 523 + + GD V+ + VD + I LS RA D Sbjct: 1480 EPWKKYAPGDAVDVRVLRVDEDDGEIDLSTRASD 1513 >UniRef50_A8V2R4 Ribosomal protein S01 n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V2R4_9AQUI Length = 368 Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 108/361 (29%), Positives = 177/361 (49%), Gaps = 18/361 (4%) Query: 18 TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVED 77 G I+ G +V VD G K+ES I E+ +Q G ++ Sbjct: 21 YHKGDILEGEIVKFADKYAFVDVGQKTESVINKEEV------EGLQEGAKIRAVFTGKRT 74 Query: 78 GFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVD 137 G LLSR+ EA +E AY++ E V + +++ GF V+L GI+AFLP S Sbjct: 75 SEGYNLLSRKPLIFREALEKVENAYKNQEKVPAKLKKQLEKGFLVDLGGIQAFLPYSESG 134 Query: 138 VRPVRDTLHLEGKELEFKVIKLDQKR--NNVVVSRRAVIESENSAERDQLLENLQEGMEV 195 ++ E E ++KLD+ R N+VVSR+ V+E E ++++L ++EGM + Sbjct: 135 LKKEEKLPE----EFEVYILKLDKNRKIPNIVVSRKKVLEEEKQKKKEKLWSEIKEGMTI 190 Query: 196 KGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTR 254 V + D GA V +G + G L + +W R K + + G EI KV++ D E+ + Sbjct: 191 PAKVVKVQDNGAVVIIGDLIYGFLPASLYSWYREKSIKD-LQKGQEIEAKVVQKDTEKQK 249 Query: 255 VSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNK 314 + L K L E+PW Y EG +T + + YG V++E ++G +H SE D + Sbjct: 250 LILSTKALEENPWEKF--PYSEGDIVTTVIKEINPYGLVVKVE-NLQGFIHKSETDHLHP 306 Query: 315 NIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSI 374 G V+ ++++D E +++ L +KQ NP +F + H +G+ + KIK+I Sbjct: 307 -ERFKSKFKEGQEVQAKIIELDRENQKLKLSIKQATENPLDKFLKEHPEGETITAKIKNI 365 Query: 375 T 375 Sbjct: 366 K 366 Score = 174 bits (441), Expect = 9e-42, Method: Composition-based stats. Identities = 77/371 (20%), Positives = 151/371 (40%), Gaps = 30/371 (8%) Query: 186 LENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 L +G ++G + D AFVD+G + +++ ++ E + G +I Sbjct: 18 LMYYHKGDILEGEIVKFADKYAFVDVGQKTESVINKEEV---------EGLQEGAKIRAV 68 Query: 245 VLKFDRERTRVSLGLKQLGEDPW-VAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGL 303 L K L + Y K+ ++ + G V++ G++ Sbjct: 69 FTGKRTSEGYNLLSRKPLIFREALEKVENAYKNQEKVPAKLKKQLEKGFLVDLG-GIQAF 127 Query: 304 VHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERR--RISLGLKQCKANPWQQF---- 357 + SE + P + EV +L +D+ R+ I + K+ Q+ Sbjct: 128 LPYSESGLKKEEKLPEEF-------EVYILKLDKNRKIPNIVVSRKKVLEEEKQKKKEKL 180 Query: 358 AETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAA 417 +G + K+ + D G + + I G + S SW E+++++ +KG EI A Sbjct: 181 WSEIKEGMTIPAKVVKVQDNGAVVIIGDLIYGFLPASLYSWYR--EKSIKDLQKGQEIEA 238 Query: 418 VVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGY 477 V+Q D E++++ L K L E+P+ + +G IVT + ++ G V++ + ++G+ Sbjct: 239 KVVQKDTEKQKLILSTKALEENPWEKF--PYSEGDIVTTVIKEINPYGLVVKV-ENLQGF 295 Query: 478 LRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQ 537 + SE E G EV+AK +DR+N+ + LS++ E + + Sbjct: 296 IHKSETDHLHPERFKSKFKEGQEVQAKIIELDRENQKLKLSIKQATENPLDKFLKEHPEG 355 Query: 538 EDANFSNNAMA 548 E + Sbjct: 356 ETITAKIKNIK 366 Score = 160 bits (406), Expect = 9e-38, Method: Composition-based stats. Identities = 77/368 (20%), Positives = 161/368 (43%), Gaps = 27/368 (7%) Query: 101 AYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLD 160 Y + + G I V++ S+++ V G ++ Sbjct: 20 YYHKGDILEGEIVKFADKYAFVDVGQKT----ESVINKEEVEGLQE--GAKIRAVFTGKR 73 Query: 161 QKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHI 220 ++SR+ +I E + + +N +V +K + G VDLGG+ L Sbjct: 74 TSEGYNLLSRKPLIFREALEKVENAYKNQ---EKVPAKLKKQLEKGFLVDLGGIQAFLPY 130 Query: 221 TDMAWKRVKHPSEIVNVGDEITVKVLKFDRERT--RVSLGLKQLGEDPWVA----IAKRY 274 ++ K+ + E V +LK D+ R + + K++ E+ + Sbjct: 131 SESGLKKEEKLPEEF------EVYILKLDKNRKIPNIVVSRKKVLEEEKQKKKEKLWSEI 184 Query: 275 PEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLD 334 EG + +V + D G V I + + G + S W + K + G +E V+ Sbjct: 185 KEGMTIPAKVVKVQDNGAVVIIGDLIYGFLPASLYSWYRE--KSIKDLQKGQEIEAKVVQ 242 Query: 335 IDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLS 394 D E++++ L K + NPW++F +++GD V IK I +G+ + ++ + G +H S Sbjct: 243 KDTEKQKLILSTKALEENPWEKF--PYSEGDIVTTVIKEINPYGLVVKVE-NLQGFIHKS 299 Query: 395 DISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIV 454 + + ++ E ++K+G E+ A ++++D E +++ L +KQ E+P + ++ + +G + Sbjct: 300 E-TDHLHPERFKSKFKEGQEVQAKIIELDRENQKLKLSIKQATENPLDKFLKEHPEGETI 358 Query: 455 TGKVTAVD 462 T K+ + Sbjct: 359 TAKIKNIK 366 Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 62/291 (21%), Positives = 123/291 (42%), Gaps = 19/291 (6%) Query: 5 FAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQV 64 F + E+ + + V + + LVD G ++ +P + + E Sbjct: 88 FREALEKVENAYKNQE--KVPAKLKKQLEKGFLVDLGG-IQAFLPYSESGLKKEEKLP-- 142 Query: 65 GDEVDVALDAVEDGFG--ETLLSREKAKRHEAWITLEKAY---EDAETVTGVINGKVKGG 119 +E +V + ++ ++SR+K E EK + ++ T+ + G Sbjct: 143 -EEFEVYILKLDKNRKIPNIVVSRKKVLEEEKQKKKEKLWSEIKEGMTIPAKVVKVQDNG 201 Query: 120 FTVELNG-IRAFLPGSLVDVRPVRDTLHL-EGKELEFKVIKLDQKRNNVVVSRRAVIESE 177 V + I FLP SL + L +G+E+E KV++ D ++ +++S +A+ E+ Sbjct: 202 AVVIIGDLIYGFLPASLYSWYREKSIKDLQKGQEIEAKVVQKDTEKQKLILSTKALEENP 261 Query: 178 NSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNV 237 EG V ++K + YG V + + G +H ++ + Sbjct: 262 WEKFP------YSEGDIVTTVIKEINPYGLVVKVENLQGFIHKSETDHLHPERFKSKFKE 315 Query: 238 GDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLT 288 G E+ K+++ DRE ++ L +KQ E+P K +PEG +T ++ N+ Sbjct: 316 GQEVQAKIIELDRENQKLKLSIKQATENPLDKFLKEHPEGETITAKIKNIK 366 >UniRef50_B9MRX3 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MRX3_ANATD Length = 663 Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 84/378 (22%), Positives = 172/378 (45%), Gaps = 11/378 (2%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQF---KNAQGE 59 + F +L + S + + G +V G ++ +++D +LVD G K+E I ++ N + Sbjct: 289 KDFERLIDRSF--LTVQRGEVVNGRIIKVEEDYLLVDIGYKAEGIIYKDEVIKNGNVNLK 346 Query: 60 LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGG 119 ++G+ ++ + D G +LS+ +A + L YE+ ETV ++ + Sbjct: 347 DLFKIGEVIEAVVIKESDEEGNVVLSKYRADILHGFEELLSKYENKETVRVIVKSIKEKS 406 Query: 120 FTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 + G ++P S GK E ++ + +++ SR+++++ Sbjct: 407 IVCDFRGTNVYVPISQWGEDVQ---TSDIGKIFEIEITDVSKEKKIAFGSRKSLLKQREE 463 Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAW-KRVKHPSEIVNVG 238 + + +L E +G V + + G V+ + G + +++ + K+ ++ +G Sbjct: 464 ERFIKQINSLDFSREYEGTVVEIREKGIVVNFENLRGFVPASEIGYLKKGAGIKKLFELG 523 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI-E 297 +++ VK+L D+ + ++ L +K+ +D W+ K G + VT + +G V I E Sbjct: 524 EKVKVKILDIDKNKKQIYLSVKKTQDDEWIKKIKNLYLGMLVDCEVTKVLPFGLVVWITE 583 Query: 298 EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQF 357 V+G VHVS + N P + VGD + V++IDEE+RRI+L LK Sbjct: 584 HDVDGFVHVSNIPLGY-NQRPHNLYKVGDSLRAKVIEIDEEKRRIALSLKDLHEEENIDT 642 Query: 358 AETHNKGDRVEGKIKSIT 375 + + +K+I Sbjct: 643 EHNEDFVITLADFVKNIK 660 Score = 175 bits (445), Expect = 3e-42, Method: Composition-based stats. Identities = 65/360 (18%), Positives = 145/360 (40%), Gaps = 15/360 (4%) Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNV 237 D+ +Q G V G + + + VD+G +G+++ ++ + ++ + Sbjct: 292 ERLIDRSFLTVQRGEVVNGRIIKVEEDYLLVDIGYKAEGIIYKDEVIKNGNVNLKDLFKI 351 Query: 238 GDEITVKVLKFDRERTRVSLG-LKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI 296 G+ I V+K E V L + + + +Y + V ++ + + Sbjct: 352 GEVIEAVVIKESDEEGNVVLSKYRADILHGFEELLSKYENKETVRVIVKSIKEKSIVCDF 411 Query: 297 EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC----KAN 352 G V +S+ + K+ + + D+ +E++ K + Sbjct: 412 -RGTNVYVPISQWGEDVQTSDIGKIFEI------EITDVSKEKKIAFGSRKSLLKQREEE 464 Query: 353 PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKG 412 + + + + EG + I + GI + + + G V S+I + G + ++ G Sbjct: 465 RFIKQINSLDFSREYEGTVVEIREKGIVVNFE-NLRGFVPASEIGYLKKGAGIKKLFELG 523 Query: 413 DEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELAD 472 +++ +L +D +++I L VK+ +D + + G +V +VT V G V + + Sbjct: 524 EKVKVKILDIDKNKKQIYLSVKKTQDDEWIKKIKNLYLGMLVDCEVTKVLPFGLVVWITE 583 Query: 473 G-VEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAI 531 V+G++ S + + VGD + AK +D + R I+LS++ E + D Sbjct: 584 HDVDGFVHVSNIPLGYNQRPHNLYKVGDSLRAKVIEIDEEKRRIALSLKDLHEEENIDTE 643 Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats. Identities = 82/383 (21%), Positives = 166/383 (43%), Gaps = 22/383 (5%) Query: 66 DEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN 125 ++++ + +E+ F E L + +++T+ + E V G I + V++ Sbjct: 270 EQIEEVVKHLEEKFNEMNLKDFERLIDRSFLTV----QRGEVVNGRIIKVEEDYLLVDIG 325 Query: 126 -GIRAFLPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 + V + L G+ +E VIK + NVV+S+ ++ Sbjct: 326 YKAEGIIYKDEVIKNGNVNLKDLFKIGEVIEAVVIKESDEEGNVVLSK---YRADILHGF 382 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 ++LL + V+ IVK++ + D G + + I+ W S+ +G Sbjct: 383 EELLSKYENKETVRVIVKSIKEKSIVCDFRGTNVYVPISQ--WGEDVQTSD---IGKIFE 437 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEG----TKLTGRVTNLTDYGCFVEIEE 298 +++ +E+ K L + + + G V + + G V E Sbjct: 438 IEITDVSKEKKIAFGSRKSLLKQREEERFIKQINSLDFSREYEGTVVEIREKGIVVNFE- 496 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFA 358 + G V SE+ + K K+ +G+ V+V +LDID+ +++I L +K+ + + W + Sbjct: 497 NLRGFVPASEIGYLKKGAGIKKLFELGEKVKVKILDIDKNKKQIYLSVKKTQDDEWIKKI 556 Query: 359 ETHNKGDRVEGKIKSITDFGIFIGLDGG-IDGLVHLSDISWNVAGEEAVREYKKGDEIAA 417 + G V+ ++ + FG+ + + +DG VH+S+I + YK GD + A Sbjct: 557 KNLYLGMLVDCEVTKVLPFGLVVWITEHDVDGFVHVSNIPLGY-NQRPHNLYKVGDSLRA 615 Query: 418 VVLQVDAERERISLGVKQLAEDP 440 V+++D E+ RI+L +K L E+ Sbjct: 616 KVIEIDEEKRRIALSLKDLHEEE 638 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 49/267 (18%), Positives = 108/267 (40%), Gaps = 15/267 (5%) Query: 274 YPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVL 333 G + GR+ + + V+I EG+++ E+ N N++ + +G+V+E +V+ Sbjct: 302 VQRGEVVNGRIIKVEEDYLLVDIGYKAEGIIYKDEVI-KNGNVNLKDLFKIGEVIEAVVI 360 Query: 334 DIDEERRRISLGLKQCK-ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVH 392 +E + L + + +++ + + V +KSI + I G + V Sbjct: 361 KESDEEGNVVLSKYRADILHGFEELLSKYENKETVRVIVKSIKEKSIVCDF-RGTNVYVP 419 Query: 393 LSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLG----VKQLAEDPFNNWVALN 448 +S +V + + ++ + V E++ +KQ E+ F + Sbjct: 420 ISQWGEDVQTSDIGKIFEIE------ITDVSKEKKIAFGSRKSLLKQREEERFIKQINSL 473 Query: 449 KKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASR-DRVEDATLVLSVGDEVEAKFTG 507 G V + KG V + + G++ ASE + + +G++V+ K Sbjct: 474 DFSREYEGTVVEIREKGIVVNF-ENLRGFVPASEIGYLKKGAGIKKLFELGEKVKVKILD 532 Query: 508 VDRKNRAISLSVRAKDEADEKDAIATV 534 +D+ + I LSV+ + + I + Sbjct: 533 IDKNKKQIYLSVKKTQDDEWIKKIKNL 559 >UniRef50_Q70DX8 Plastid ribosomal protein S1 n=6 Tax=Viridiplantae RepID=Q70DX8_CHLRE Length = 436 Score = 214 bits (546), Expect = 6e-54, Method: Composition-based stats. Identities = 77/285 (27%), Positives = 134/285 (47%), Gaps = 11/285 (3%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ--- 57 M E ++ E + E + G V G V+ +D D V+ G K+ + P + A+ Sbjct: 123 MYEEVEEMLEAV--DYEFKVGDKVSGTVIEVDDDGAYVEIGAKAIAFCPVTECSFARLKT 180 Query: 58 GELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVK 117 ++ G + D + E+ +G+ ++S + W + + E+ TVT + K Sbjct: 181 PLEALRPGMKRDFMVVEDEEEYGQVIVSLAAMEATTFWQRIRQLQEEDITVTVSVESVNK 240 Query: 118 GGFTVELNGIRAFLPGSLVDVRPVRD-TLHLEGKELEFKVIKLDQKRNNVVVSRRAVIES 176 GG V+ F+P S D L G EL+ K +++D++ +V S + + Sbjct: 241 GGMLVKFGIYDGFIPVSQFGPSITPDNMESLVGFELQVKFLEVDEEAERLVFSHKRASST 300 Query: 177 ENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVN 236 ++ ++ + G V G+V+++ YGAF+DLGGV GLLH++ ++ RV +I+ Sbjct: 301 VSND-----IQGFKVGDVVAGVVQSVKPYGAFIDLGGVTGLLHVSQISHDRVLVLDKILQ 355 Query: 237 VGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLT 281 GD+I V +L DRER RV+L K+L P + K Sbjct: 356 EGDKIKVMILSQDRERGRVTLSTKKLEPTPGDMLRDPQLVYEKAE 400 Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 67/292 (22%), Positives = 121/292 (41%), Gaps = 7/292 (2%) Query: 264 EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVN 323 E+ A+ + G K++G V + D G +VEI V+E + P + + Sbjct: 128 EEMLEAVDYEFKVGDKVSGTVIEVDDDGAYVEIGAKAIAFCPVTECS-FARLKTPLEALR 186 Query: 324 VGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDR-VEGKIKSITDFGIFIG 382 G + MV++ +EE ++ + L +A + Q + D V ++S+ G+ + Sbjct: 187 PGMKRDFMVVEDEEEYGQVIVSLAAMEATTFWQRIRQLQEEDITVTVSVESVNKGGMLVK 246 Query: 383 LDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFN 442 DG + +S ++ + G E+ L+VD E ER+ K+ + + Sbjct: 247 FGI-YDGFIPVSQFGPSITPDNMESL--VGFELQVKFLEVDEEAERLVFSHKRASST-VS 302 Query: 443 NWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVE 502 N + K G +V G V +V GA ++L GV G L S+ S DRV +L GD+++ Sbjct: 303 NDIQGFKVGDVVAGVVQSVKPYGAFIDLG-GVTGLLHVSQISHDRVLVLDKILQEGDKIK 361 Query: 503 AKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAA 554 DR+ ++LS + + E A + + A Sbjct: 362 VMILSQDRERGRVTLSTKKLEPTPGDMLRDPQLVYEKAEEMAEQFRKRVEQA 413 Score = 91.9 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 71/178 (39%), Gaps = 4/178 (2%) Query: 346 LKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEA 405 + + + GD+V G + + D G ++ + +++ S+ + Sbjct: 123 MYEEVEEMLEAVDYEFKVGDKVSGTVIEVDDDGAYVEIGAKAIAFCPVTECSFAR-LKTP 181 Query: 406 VREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAI-VTGKVTAVDAK 464 + + G + +V++ + E ++ + + + F + ++ I VT V +V+ Sbjct: 182 LEALRPGMKRDFMVVEDEEEYGQVIVSLAAMEATTFWQRIRQLQEEDITVTVSVESVNKG 241 Query: 465 GATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAK 522 G V+ +G++ S+ D L VG E++ KF VD + + S + Sbjct: 242 GMLVKFGI-YDGFIPVSQFGPSITPDNMESL-VGFELQVKFLEVDEEAERLVFSHKRA 297 >UniRef50_A4RTM3 Plastid ribosomal protein S1, imported to chloroplast, small ribosomal subunit n=2 Tax=Ostreococcus RepID=A4RTM3_OSTLU Length = 339 Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 79/281 (28%), Positives = 138/281 (49%), Gaps = 13/281 (4%) Query: 4 SFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQ 63 FA L ++ + + G ++ G + A D V+ G KSE+ P + Sbjct: 46 EFASLLDKY--QYNYKVGDVISGKIKACDAKGAWVEIGAKSEALCPTSEASLGNVRNAAA 103 Query: 64 VGDE---VDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 V D D + ++G G LS + + +AW +A D +TG + +GG Sbjct: 104 VFDIDCDYDFEIIQDDNGEGCMTLSVRRMELAKAWDRCREAQADDAALTGDVLSVNRGGL 163 Query: 121 TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 VE+ +R F+P S + VR + + L G++L FK I++D+++N +V+S R + ++ Sbjct: 164 LVEVEKLRGFVPQSHIGVRTL-NREELIGQQLPFKFIEVDEEKNRLVLSHRLATDMVSA- 221 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 E L+ G V+G+V+ + YGAFVD+GG GLLHI+ ++ +R+ +++ GD Sbjct: 222 ------EGLEVGDVVEGMVQAVKPYGAFVDVGGQSGLLHISQISHERIVAVENVLSPGDR 275 Query: 241 ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLT 281 I V V+ D E+ R+SL K+L ++ + Sbjct: 276 IKVLVMSKDAEKGRLSLSTKKLEQNHGDMLRNPAAVFETAE 316 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 62/288 (21%), Positives = 114/288 (39%), Gaps = 11/288 (3%) Query: 270 IAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVE 329 Y G ++G++ G +VEI E L SE N + + V ++ + Sbjct: 54 YQYNYKVGDVISGKIKACDAKGAWVEIGAKSEALCPTSEASLGN-VRNAAAVFDIDCDYD 112 Query: 330 VMVLDIDEERRRISLGLKQCK-ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGID 388 ++ D ++L +++ + A W + E + G + S+ G+ + ++ + Sbjct: 113 FEIIQDDNGEGCMTLSVRRMELAKAWDRCREAQADDAALTGDVLSVNRGGLLVEVE-KLR 171 Query: 389 GLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALN 448 G V S I E + G ++ ++VD E+ R+ L + + Sbjct: 172 GFVPQSHIGVRTLNREEL----IGQQLPFKFIEVDEEKNRLVLSHRLATD---MVSAEGL 224 Query: 449 KKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGV 508 + G +V G V AV GA V++ G G L S+ S +R+ VLS GD ++ Sbjct: 225 EVGDVVEGMVQAVKPYGAFVDVG-GQSGLLHISQISHERIVAVENVLSPGDRIKVLVMSK 283 Query: 509 DRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAAKG 556 D + +SLS + ++ E A E +AA+G Sbjct: 284 DAEKGRLSLSTKKLEQNHGDMLRNPAAVFETAEDMGRQFREKMQAAEG 331 Score = 161 bits (407), Expect = 8e-38, Method: Composition-based stats. Identities = 58/265 (21%), Positives = 118/265 (44%), Gaps = 12/265 (4%) Query: 188 NLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSEIVNVGDEITVKVL 246 N + G + G +K GA+V++G + L ++ + V++ + + ++ + +++ Sbjct: 57 NYKVGDVISGKIKACDAKGAWVEIGAKSEALCPTSEASLGNVRNAAAVFDIDCDYDFEII 116 Query: 247 KFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTK-LTGRVTNLTDYGCFVEIEEGVEGLVH 305 + D ++L ++++ + LTG V ++ G VE+E + G V Sbjct: 117 QDDNGEGCMTLSVRRMELAKAWDRCREAQADDAALTGDVLSVNRGGLLVEVE-KLRGFVP 175 Query: 306 VSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGD 365 S + ++ +G + +++DEE+ R+ L + AE GD Sbjct: 176 QSHIG----VRTLNREELIGQQLPFKFIEVDEEKNRLVLSHRLATD---MVSAEGLEVGD 228 Query: 366 RVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAE 425 VEG ++++ +G F+ + GG GL+H+S IS GD I +V+ DAE Sbjct: 229 VVEGMVQAVKPYGAFVDV-GGQSGLLHISQISHERIV-AVENVLSPGDRIKVLVMSKDAE 286 Query: 426 RERISLGVKQLAEDPFNNWVALNKK 450 + R+SL K+L ++ + Sbjct: 287 KGRLSLSTKKLEQNHGDMLRNPAAV 311 >UniRef50_B4WRF0 S1 RNA binding domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WRF0_9SYNE Length = 304 Score = 208 bits (529), Expect = 5e-52, Method: Composition-based stats. Identities = 75/273 (27%), Positives = 136/273 (49%), Gaps = 13/273 (4%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK---NAQGE 59 E FA+ E+ ++ + GS++ G V + D VD G KS + +P ++ + E Sbjct: 18 EDFAKALEQ--QDYQFSRGSVITGKVETHESDGAYVDIGGKSAAFLPTKEASIDSDILLE 75 Query: 60 LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGG 119 + +G E + +D G+ ++S + E W L + E+ + + I+G KGG Sbjct: 76 EILPIGTERKFLIIRDQDANGQLVISIRAMEIKELWERLRERQENGDVLEVTISGSNKGG 135 Query: 120 FTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 T +++G+RAF+P S + R V D L G + +++D+++N +++S R Sbjct: 136 VTADVSGLRAFIPRSHLA-RRVEDLDTLMGATINAAFLEVDEEKNKLLLSERIAA----- 189 Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGD 239 R + +L +G ++G + +L +GAFVD GG GLLHI ++ + ++ VGD Sbjct: 190 --RATAMSSLTKGELIEGTIASLKPFGAFVDFGGASGLLHIKQISKSYISALGDVFKVGD 247 Query: 240 EITVKVLKFDRERTRVSLGLKQLGEDPWVAIAK 272 I VL D +R R++L + L + P + Sbjct: 248 PIKAVVLNIDEQRGRIALSTQVLEKYPGEILKD 280 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 54/285 (18%), Positives = 115/285 (40%), Gaps = 21/285 (7%) Query: 273 RYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMV 332 ++ G+ +TG+V G +V+I + E + + +++ +G + ++ Sbjct: 30 QFSRGSVITGKVETHESDGAYVDIGGKSAAFLPTKEASIDSDIL-LEEILPIGTERKFLI 88 Query: 333 LDIDEERRRISLGLKQCKANP-WQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLV 391 + + ++ + ++ + W++ E GD +E I G+ + G+ + Sbjct: 89 IRDQDANGQLVISIRAMEIKELWERLRERQENGDVLEVTISGSNKGGVTADVS-GLRAFI 147 Query: 392 HLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKG 451 S ++ E+ G I A L+VD E+ ++ L + A ++ KG Sbjct: 148 PRSHLA--RRVEDLDTL--MGATINAAFLEVDEEKNKLLLSERIAARA---TAMSSLTKG 200 Query: 452 AIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRK 511 ++ G + ++ GA V+ G G L + S+ + V VGD ++A +D + Sbjct: 201 ELIEGTIASLKPFGAFVDFG-GASGLLHIKQISKSYISALGDVFKVGDPIKAVVLNIDEQ 259 Query: 512 NRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAAKG 556 I+LS + ++ E + MAEA + AK Sbjct: 260 RGRIALSTQVLEKYP----------GEILKDLSTMMAEAEERAKN 294 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 58/251 (23%), Positives = 108/251 (43%), Gaps = 12/251 (4%) Query: 192 GMEVKGIVKNLTDYGAFVDLGGVDG-LLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDR 250 G + G V+ GA+VD+GG L + + EI+ +G E +++ Sbjct: 34 GSVITGKVETHESDGAYVDIGGKSAAFLPTKEASIDSDILLEEILPIGTERKFLIIRDQD 93 Query: 251 ERTRVSLGLKQLGEDP-WVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEM 309 ++ + ++ + W + +R G L ++ G ++ G+ + S + Sbjct: 94 ANGQLVISIRAMEIKELWERLRERQENGDVLEVTISGSNKGGVTADVS-GLRAFIPRSHL 152 Query: 310 DWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEG 369 + + +G + L++DEE+ ++ L + + KG+ +EG Sbjct: 153 A--RRVEDLDTL--MGATINAAFLEVDEEKNKLLLSERIA---ARATAMSSLTKGELIEG 205 Query: 370 KIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERI 429 I S+ FG F+ GG GL+H+ IS + +K GD I AVVL +D +R RI Sbjct: 206 TIASLKPFGAFVDF-GGASGLLHIKQISKSYIS-ALGDVFKVGDPIKAVVLNIDEQRGRI 263 Query: 430 SLGVKQLAEDP 440 +L + L + P Sbjct: 264 ALSTQVLEKYP 274 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 31/198 (15%), Positives = 81/198 (40%), Gaps = 9/198 (4%) Query: 352 NPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKK 411 +Q ++G + GK+++ G ++ + G + + S + Sbjct: 22 KALEQQDYQFSRGSVITGKVETHESDGAYVDIGGKSAAFLPTKEASIDSDI-LLEEILPI 80 Query: 412 GDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKK-GAIVTGKVTAVDAKGATVEL 470 G E ++++ ++ + ++ + + ++ G ++ ++ + G T ++ Sbjct: 81 GTERKFLIIRDQDANGQLVISIRAMEIKELWERLRERQENGDVLEVTISGSNKGGVTADV 140 Query: 471 ADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDA 530 + G+ ++ S +R RVED + +G + A F VD + + LS R A A Sbjct: 141 S-GLRAFIPRSHLAR-RVEDLDTL--MGATINAAFLEVDEEKNKLLLSER---IAARATA 193 Query: 531 IATVNKQEDANFSNNAMA 548 ++++ K E + ++ Sbjct: 194 MSSLTKGELIEGTIASLK 211 >UniRef50_C1EEV9 Predicted protein n=2 Tax=Micromonas RepID=C1EEV9_9CHLO Length = 387 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 81/282 (28%), Positives = 133/282 (47%), Gaps = 13/282 (4%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL-- 60 + F +L + + + G V G V D VD G K+ + P + AQ Sbjct: 71 KEFERLLVDY--QFSYKVGDRVTGKVFHCDAKGAWVDIGAKAAALCPGSEASLAQARNAA 128 Query: 61 -EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGG 119 +G+E + + +DG G LS K + AW + + E V V+ +GG Sbjct: 129 AVFDIGEEYEFEIIRDDDGDGSLTLSVRKIQLEAAWNRCREMQANDEAVNSVVLSVNRGG 188 Query: 120 FTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 VE+ +R F+P S + +R V + L G+ + K +++D+++N +V+S R + + Sbjct: 189 LLVEVEHLRGFVPQSHIAMR-VPNRDELIGQSVPVKFLEVDEEKNRLVMSNRLATDVVSG 247 Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGD 239 E L G KG+V+ + YGAFVD+GGV GLLHI+ ++ R+ ++ GD Sbjct: 248 -------EGLGVGDVCKGVVQAVKPYGAFVDVGGVSGLLHISQISHDRIVAVENVLAPGD 300 Query: 240 EITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLT 281 E+ V +L D ER+R+SL K+L P + K Sbjct: 301 ELKVLILSKDAERSRLSLSTKKLEPSPGDMLRNPALVFEKAD 342 Score = 178 bits (451), Expect = 6e-43, Method: Composition-based stats. Identities = 59/281 (20%), Positives = 110/281 (39%), Gaps = 11/281 (3%) Query: 270 IAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVE 329 Y G ++TG+V + G +V+I L SE + + V ++G+ E Sbjct: 80 YQFSYKVGDRVTGKVFHCDAKGAWVDIGAKAAALCPGSEASLAQA-RNAAAVFDIGEEYE 138 Query: 330 VMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDR-VEGKIKSITDFGIFIGLDGGID 388 ++ D+ ++L +++ + D V + S+ G+ + ++ + Sbjct: 139 FEIIRDDDGDGSLTLSVRKIQLEAAWNRCREMQANDEAVNSVVLSVNRGGLLVEVE-HLR 197 Query: 389 GLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALN 448 G V S I+ V + + G + L+VD E+ R+ + + + Sbjct: 198 GFVPQSHIAMRVPNRDEL----IGQSVPVKFLEVDEEKNRLVMSNRLATD---VVSGEGL 250 Query: 449 KKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGV 508 G + G V AV GA V++ GV G L S+ S DR+ VL+ GDE++ Sbjct: 251 GVGDVCKGVVQAVKPYGAFVDVG-GVSGLLHISQISHDRIVAVENVLAPGDELKVLILSK 309 Query: 509 DRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAE 549 D + +SLS + + + E A+ E Sbjct: 310 DAERSRLSLSTKKLEPSPGDMLRNPALVFEKADEMGRLFRE 350 Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats. Identities = 61/262 (23%), Positives = 119/262 (45%), Gaps = 12/262 (4%) Query: 188 NLQEGMEVKGIVKNLTDYGAFVDLGGVDG-LLHITDMAWKRVKHPSEIVNVGDEITVKVL 246 + + G V G V + GA+VD+G L ++ + + ++ + + ++G+E +++ Sbjct: 83 SYKVGDRVTGKVFHCDAKGAWVDIGAKAAALCPGSEASLAQARNAAAVFDIGEEYEFEII 142 Query: 247 KFDRERTRVSLGLKQLG-EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVH 305 + D ++L ++++ E W + + V ++ G VE+E + G V Sbjct: 143 RDDDGDGSLTLSVRKIQLEAAWNRCREMQANDEAVNSVVLSVNRGGLLVEVE-HLRGFVP 201 Query: 306 VSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGD 365 S + N +G V V L++DEE+ R+ + + E GD Sbjct: 202 QSHIAMRVPNRDEL----IGQSVPVKFLEVDEEKNRLVMSNRLATD---VVSGEGLGVGD 254 Query: 366 RVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAE 425 +G ++++ +G F+ + GG+ GL+H+S IS + GDE+ ++L DAE Sbjct: 255 VCKGVVQAVKPYGAFVDV-GGVSGLLHISQISHDRIV-AVENVLAPGDELKVLILSKDAE 312 Query: 426 RERISLGVKQLAEDPFNNWVAL 447 R R+SL K+L P + Sbjct: 313 RSRLSLSTKKLEPSPGDMLRNP 334 >UniRef50_Q0PQN6 30S ribosomal subunit protein S1 (Fragment) n=2 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=Q0PQN6_9GAMM Length = 283 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 144/176 (81%), Positives = 164/176 (93%) Query: 138 VRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKG 197 VRPVRDT +LEGK+LEFKVIKLD++RNNVVVSRRAV+E E SAER++LLENLQEG E+KG Sbjct: 62 VRPVRDTAYLEGKDLEFKVIKLDRRRNNVVVSRRAVVEQEYSAEREKLLENLQEGQELKG 121 Query: 198 IVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSL 257 +VKNLTDYGAFVDLGG+DGLLHITDMAWKRVKHPS++V +GDEITVKVLKFDRER RVSL Sbjct: 122 VVKNLTDYGAFVDLGGIDGLLHITDMAWKRVKHPSDVVQIGDEITVKVLKFDRERNRVSL 181 Query: 258 GLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTN 313 GLKQ+G+DPWVA+A+RYPE T+L G+VTN+ DYGCFVEIEEGVEGLVHVSEMD Sbjct: 182 GLKQMGDDPWVALARRYPESTRLFGKVTNIADYGCFVEIEEGVEGLVHVSEMDLDQ 237 Score = 171 bits (433), Expect = 8e-41, Method: Composition-based stats. Identities = 55/173 (31%), Positives = 93/173 (53%), Gaps = 6/173 (3%) Query: 324 VGDVVEVMVLDIDEERRRISLGLKQCKANPW----QQFAETHNKGDRVEGKIKSITDFGI 379 G +E V+ +D R + + + + ++ E +G ++G +K++TD+G Sbjct: 72 EGKDLEFKVIKLDRRRNNVVVSRRAVVEQEYSAEREKLLENLQEGQELKGVVKNLTDYGA 131 Query: 380 FIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAED 439 F+ L GGIDGL+H++D++W + + GDEI VL+ D ER R+SLG+KQ+ +D Sbjct: 132 FVDL-GGIDGLLHITDMAWKRV-KHPSDVVQIGDEITVKVLKFDRERNRVSLGLKQMGDD 189 Query: 440 PFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDAT 492 P+ + + GKVT + G VE+ +GVEG + SE D+ E + Sbjct: 190 PWVALARRYPESTRLFGKVTNIADYGCFVEIEEGVEGLVHVSEMDLDQQEHPS 242 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 66/180 (36%), Positives = 105/180 (58%), Gaps = 7/180 (3%) Query: 225 WKRVKHPSE-IVNVGDEITVKVLKFDRERTRVSLGLKQLGEDP----WVAIAKRYPEGTK 279 W V+ + G ++ KV+K DR R V + + + E + + EG + Sbjct: 59 WWIVRPVRDTAYLEGKDLEFKVIKLDRRRNNVVVSRRAVVEQEYSAEREKLLENLQEGQE 118 Query: 280 LTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEER 339 L G V NLTDYG FV++ G++GL+H+++M W + HPS VV +GD + V VL D ER Sbjct: 119 LKGVVKNLTDYGAFVDLG-GIDGLLHITDMAW-KRVKHPSDVVQIGDEITVKVLKFDRER 176 Query: 340 RRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWN 399 R+SLGLKQ +PW A + + R+ GK+ +I D+G F+ ++ G++GLVH+S++ + Sbjct: 177 NRVSLGLKQMGDDPWVALARRYPESTRLFGKVTNIADYGCFVEIEEGVEGLVHVSEMDLD 236 Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 65/156 (41%), Gaps = 5/156 (3%) Query: 398 WNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVA----LNKKGAI 453 W + Y +G ++ V+++D R + + + + E ++ ++G Sbjct: 59 WWIVRPVRDTAYLEGKDLEFKVIKLDRRRNNVVVSRRAVVEQEYSAEREKLLENLQEGQE 118 Query: 454 VTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNR 513 + G V + GA V+L G++G L ++ + RV+ + V+ +GDE+ K DR+ Sbjct: 119 LKGVVKNLTDYGAFVDLG-GIDGLLHITDMAWKRVKHPSDVVQIGDEITVKVLKFDRERN 177 Query: 514 AISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAE 549 +SL ++ + + +A+ Sbjct: 178 RVSLGLKQMGDDPWVALARRYPESTRLFGKVTNIAD 213 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 42/180 (23%), Positives = 82/180 (45%), Gaps = 10/180 (5%) Query: 59 ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHE---AWITLEKAYEDAETVTGVINGK 115 + G +++ + ++ ++SR E L + ++ + + GV+ Sbjct: 67 DTAYLEGKDLEFKVIKLDRRRNNVVVSRRAVVEQEYSAEREKLLENLQEGQELKGVVKNL 126 Query: 116 VKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLE--GKELEFKVIKLDQKRNNVVVSRRAV 173 G V+L GI L + + + V+ + G E+ KV+K D++RN V + + + Sbjct: 127 TDYGAFVDLGGIDGLLHITDMAWKRVKHPSDVVQIGDEITVKVLKFDRERNRVSLGLKQM 186 Query: 174 IESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPS 232 + L E + G V N+ DYG FV++ GV+GL+H+++M + +HPS Sbjct: 187 GDDP----WVALARRYPESTRLFGKVTNIADYGCFVEIEEGVEGLVHVSEMDLDQQEHPS 242 Score = 97.3 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 25/144 (17%), Positives = 50/144 (34%), Gaps = 12/144 (8%) Query: 6 AQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQGELEI 62 +L E + G ++GVV + VD G + + + Sbjct: 107 EKLLE------NLQEGQELKGVVKNLTDYGAFVDLGG-IDGLLHITDMAWKRVKHPSDVV 159 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 Q+GDE+ V + + L ++ W+ L + Y ++ + G + G V Sbjct: 160 QIGDEITVKVLKFDRERNRVSLGLKQMGDDP-WVALARRYPESTRLFGKVTNIADYGCFV 218 Query: 123 EL-NGIRAFLPGSLVDVRPVRDTL 145 E+ G+ + S +D+ Sbjct: 219 EIEEGVEGLVHVSEMDLDQQEHPS 242 >UniRef50_P29344 30S ribosomal protein S1, chloroplastic n=21 Tax=Embryophyta RepID=RR1_SPIOL Length = 411 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 74/283 (26%), Positives = 129/283 (45%), Gaps = 16/283 (5%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEI 62 + F ++ + + GS V+G V D + LVD KS + +P + + + Sbjct: 80 DDFHTALDKY--DFNSEMGSRVKGTVFCTDANGALVDITAKSSAYLPLAEACIYRIKNVE 137 Query: 63 Q----VGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 + G + + + +LS + + AW + + V G I G KG Sbjct: 138 EAGIIPGVREEFVIIGENEADDSLILSLRQIQYELAWERCRQLQAEDVVVKGKIVGANKG 197 Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 G + G+R F+P S + + + L KE+ K +++D++++ +V+S R + Sbjct: 198 GVVALVEGLRGFVPFSQISSKSSAE--ELLEKEIPLKFVEVDEEQSRLVMSNRKAMADSQ 255 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVG 238 + L G V G V++L YGAF+D+GG++GLLH++ ++ RV + ++ G Sbjct: 256 A--------QLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVSDIATVLQPG 307 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLT 281 D + V +L DRER RVSL K+L P I K Sbjct: 308 DTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAE 350 Score = 171 bits (433), Expect = 7e-41, Method: Composition-based stats. Identities = 62/273 (22%), Positives = 113/273 (41%), Gaps = 14/273 (5%) Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKV-VNVGDVVEVMVLDI 335 G+++ G V G V+I + ++E + + + + G E +++ Sbjct: 96 GSRVKGTVFCTDANGALVDITAKSSAYLPLAE-ACIYRIKNVEEAGIIPGVREEFVIIGE 154 Query: 336 DEERRRISLGLKQCKAN-PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLS 394 +E + L L+Q + W++ + + V+GKI G+ + L G+ G V S Sbjct: 155 NEADDSLILSLRQIQYELAWERCRQLQAEDVVVKGKIVGANKGGV-VALVEGLRGFVPFS 213 Query: 395 DISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIV 454 IS + EE + EI ++VD E+ R+ + ++ + A G++V Sbjct: 214 QISSKSSAEELLE-----KEIPLKFVEVDEEQSRLVMSNRKA----MADSQAQLGIGSVV 264 Query: 455 TGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRA 514 TG V ++ GA +++ G+ G L S+ S DRV D VL GD ++ DR+ Sbjct: 265 TGTVQSLKPYGAFIDIG-GINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGR 323 Query: 515 ISLSVRAKDEADEKDAIATVNKQEDANFSNNAM 547 +SLS + + E A Sbjct: 324 VSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTF 356 Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 62/271 (22%), Positives = 122/271 (45%), Gaps = 19/271 (7%) Query: 103 EDAETVTGVINGKVKGGFTVEL-NGIRAFLPGSLVDVRPVRDTLH---LEGKELEFKVIK 158 E V G + G V++ A+LP + + +++ + G EF +I Sbjct: 94 EMGSRVKGTVFCTDANGALVDITAKSSAYLPLAEACIYRIKNVEEAGIIPGVREEFVIIG 153 Query: 159 LDQKRNNVVVSRRAVI-ESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGL 217 ++ +++++S R + E R E++ VKG + G + G+ G Sbjct: 154 ENEADDSLILSLRQIQYELAWERCRQLQAEDV----VVKGKIVGANKGGVVALVEGLRGF 209 Query: 218 LHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEG 277 + + ++ K E++ EI +K ++ D E++R+ + ++ D + G Sbjct: 210 VPFSQISSK--SSAEELLE--KEIPLKFVEVDEEQSRLVMSNRKAMADSQAQLG----IG 261 Query: 278 TKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDE 337 + +TG V +L YG F++I G+ GL+HVS++ + + V+ GD ++VM+L D Sbjct: 262 SVVTGTVQSLKPYGAFIDIG-GINGLLHVSQISHD-RVSDIATVLQPGDTLKVMILSHDR 319 Query: 338 ERRRISLGLKQCKANPWQQFAETHNKGDRVE 368 ER R+SL K+ + P ++ E Sbjct: 320 ERGRVSLSTKKLEPTPGDMIRNPKLVFEKAE 350 Score = 71.5 bits (174), Expect = 7e-11, Method: Composition-based stats. Identities = 29/178 (16%), Positives = 62/178 (34%), Gaps = 6/178 (3%) Query: 353 PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKG 412 ++ G RV+G + G + + + L++ G Sbjct: 85 ALDKYDFNSEMGSRVKGTVFCTDANGALVDITAKSSAYLPLAEACIYRIKNVEEAGIIPG 144 Query: 413 DEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGA-IVTGKVTAVDAKGATVELA 471 V++ + + + L ++Q+ + + +V GK+ + G V L Sbjct: 145 VREEFVIIGENEADDSLILSLRQIQYELAWERCRQLQAEDVVVKGKIVGANKGGV-VALV 203 Query: 472 DGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKD 529 +G+ G++ S+ S A +L E+ KF VD + + +S R + Sbjct: 204 EGLRGFVPFSQISSK--SSAEELLEK--EIPLKFVEVDEEQSRLVMSNRKAMADSQAQ 257 >UniRef50_D2AQV7 30S ribosomal protein S1 n=5 Tax=Actinomycetales RepID=D2AQV7_STRRD Length = 294 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 67/275 (24%), Positives = 111/275 (40%), Gaps = 11/275 (4%) Query: 264 EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE---EGVEGLVHVSEMDWTNKNIHPSK 320 E A + G LTG V +T V ++ G + ++ W + ++ Sbjct: 7 EQSLAAFLRTVNVGDVLTGTVAEVTRSQTTVLLDAFTSDPVGSISWLDLSWRSFGRPAAE 66 Query: 321 VVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIF 380 ++ VG V V+ +D + RR+ L + + + G R+ G + +I FG+F Sbjct: 67 ILEVGAKVSSEVIAVDLQERRVRLSWSATENPQLWAYLKALRPGQRLSGTVAAIERFGVF 126 Query: 381 IGLDGGID-------GLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGV 433 + LD G D G + + ++SW E+ G+ I+ VL D + + Sbjct: 127 VDLDDGPDHPVFPGVGFITMPELSW-RRFEDPSEVVSVGERISCEVLTFDTHNGEARVSL 185 Query: 434 KQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATL 493 + DPF + G I+ G VT V GA V +AD EG + SE + V A Sbjct: 186 RATQPDPFQQFARGVHVGQILYGPVTKVVPFGAFVRVADDAEGLVHLSELTALPVAAALD 245 Query: 494 VLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEK 528 + +GDEV +D R ++LS Sbjct: 246 AVQIGDEVTVIVIEIDPLRRRLALSRCQAAMKTWD 280 Score = 170 bits (432), Expect = 1e-40, Method: Composition-based stats. Identities = 72/285 (25%), Positives = 125/285 (43%), Gaps = 20/285 (7%) Query: 86 REKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-------GIRAFLPGSLVDV 138 A+ ++ + + +TG + + TV L+ G ++L S Sbjct: 1 MGTAEHEQSLAAFLRTVNVGDVLTGTVAEVTRSQTTVLLDAFTSDPVGSISWLDLSWRSF 60 Query: 139 RPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGI 198 + G ++ +VI +D + V R + + + L+ L+ G + G Sbjct: 61 GRPAAEILEVGAKVSSEVIAVDLQERRV----RLSWSATENPQLWAYLKALRPGQRLSGT 116 Query: 199 VKNLTDYGAFVDLGGV--------DGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDR 250 V + +G FVDL G + + +++W+R + PSE+V+VG+ I+ +VL FD Sbjct: 117 VAAIERFGVFVDLDDGPDHPVFPGVGFITMPELSWRRFEDPSEVVSVGERISCEVLTFDT 176 Query: 251 ERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMD 310 + L+ DP+ A+ G L G VT + +G FV + + EGLVH+SE+ Sbjct: 177 HNGEARVSLRATQPDPFQQFARGVHVGQILYGPVTKVVPFGAFVRVADDAEGLVHLSELT 236 Query: 311 WTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQ 355 V +GD V V+V++ID RRR++L Q W Sbjct: 237 -ALPVAAALDAVQIGDEVTVIVIEIDPLRRRLALSRCQAAMKTWD 280 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 55/283 (19%), Positives = 104/283 (36%), Gaps = 27/283 (9%) Query: 4 SFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSE---SAIPAEQFKN----A 56 Q L+ G ++ G V + + V + +I Sbjct: 5 EHEQSLAAFLR--TVNVGDVLTGTVAEVTRSQTTVLLDAFTSDPVGSISWLDLSWRSFGR 62 Query: 57 QGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKV 116 ++VG +V + AV+ LS + + W L KA + ++G + Sbjct: 63 PAAEILEVGAKVSSEVIAVDLQERRVRLSWSATENPQLWAYL-KALRPGQRLSGTVAAIE 121 Query: 117 KGGFTVELN---------GIRAFLPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNN 165 + G V+L+ G+ F+ + R D + G+ + +V+ D Sbjct: 122 RFGVFVDLDDGPDHPVFPGV-GFITMPELSWRRFEDPSEVVSVGERISCEVLTFDTHNG- 179 Query: 166 VVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMA 224 R + + Q + G + G V + +GAFV + +GL+H++++ Sbjct: 180 ---EARVSLRATQPDPFQQFARGVHVGQILYGPVTKVVPFGAFVRVADDAEGLVHLSELT 236 Query: 225 WKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPW 267 V + V +GDE+TV V++ D R R++L Q W Sbjct: 237 ALPVAAALDAVQIGDEVTVIVIEIDPLRRRLALSRCQAAMKTW 279 Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 46/199 (23%), Positives = 81/199 (40%), Gaps = 10/199 (5%) Query: 350 KANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLD---GGIDGLVHLSDISWNVAGEEAV 406 F T N GD + G + +T + LD G + D+SW G A Sbjct: 6 HEQSLAAFLRTVNVGDVLTGTVAEVTRSQTTVLLDAFTSDPVGSISWLDLSWRSFGRPAA 65 Query: 407 REYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGA 466 + G ++++ V+ VD + R+ L ++ + G ++G V A++ G Sbjct: 66 EILEVGAKVSSEVIAVDLQERRVRLSWSATENPQLWAYLKALRPGQRLSGTVAAIERFGV 125 Query: 467 TVELADGVE-------GYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSV 519 V+L DG + G++ E S R ED + V+SVG+ + + D N +S+ Sbjct: 126 FVDLDDGPDHPVFPGVGFITMPELSWRRFEDPSEVVSVGERISCEVLTFDTHNGEARVSL 185 Query: 520 RAKDEADEKDAIATVNKQE 538 RA + V+ + Sbjct: 186 RATQPDPFQQFARGVHVGQ 204 Score = 43.4 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 41/117 (35%), Gaps = 4/117 (3%) Query: 436 LAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVE---GYLRASEASRDRVEDAT 492 E ++ G ++TG V V TV L G + + S Sbjct: 5 EHEQSLAAFLRTVNVGDVLTGTVAEVTRSQTTVLLDAFTSDPVGSISWLDLSWRSFGRPA 64 Query: 493 -LVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMA 548 +L VG +V ++ VD + R + LS A + + + + + + A+ Sbjct: 65 AEILEVGAKVSSEVIAVDLQERRVRLSWSATENPQLWAYLKALRPGQRLSGTVAAIE 121 >UniRef50_B1XJQ5 30S ribosomal protein S1 like protein n=1 Tax=Synechococcus sp. PCC 7002 RepID=B1XJQ5_SYNP2 Length = 296 Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats. Identities = 76/286 (26%), Positives = 127/286 (44%), Gaps = 15/286 (5%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQF---KNAQG 58 + F E + + G +V G + D VLVD G KS P Sbjct: 13 MDDFEHALTEH--DYQFEQGQVVTGKIFEHLSDGVLVDIGGKSPGFSPLRDALLAGETDA 70 Query: 59 ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 + VG+ V+ + ++ G+ LSR K W L +A E +V + G +G Sbjct: 71 HTALPVGENVEFLIVRGQNAEGQVTLSRRKLAEQRVWEDLAQAAEAGNSVQMRVTGSNRG 130 Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 G T ++ G+R F+P S + + + D G+ L ++ DQ+R +V+S+R ++E Sbjct: 131 GVTGDIQGLRGFIPNSHLVDKNIDDL---MGQLLTVNFLEFDQERRKLVLSQRYAAQAE- 186 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVG 238 ++ L G V G V N+ YG FV+L G+ GLLH + ++ K V+ + ++G Sbjct: 187 ------VMRRLSIGALVSGTVVNIKPYGVFVELDGMTGLLHRSQISAKPVEQIEALFSIG 240 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRV 284 + V + + R+SL L+ L + P I + T RV Sbjct: 241 QTVRVLITDIEESNNRISLSLQALEKFPGEVIEQFDAVQTNAEERV 286 Score = 160 bits (406), Expect = 1e-37, Method: Composition-based stats. Identities = 58/298 (19%), Positives = 116/298 (38%), Gaps = 14/298 (4%) Query: 255 VSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNK 314 ++ + E ++ +G +TG++ G V+I G + + Sbjct: 9 IAFSM-DDFEHALTEHDYQFEQGQVVTGKIFEHLSDGVLVDIGGKSPGFSPLRD-ALLAG 66 Query: 315 NIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQ-CKANPWQQFAETHNKGDRVEGKIKS 373 + VG+ VE +++ +++L ++ + W+ A+ G+ V+ ++ Sbjct: 67 ETDAHTALPVGENVEFLIVRGQNAEGQVTLSRRKLAEQRVWEDLAQAAEAGNSVQMRVTG 126 Query: 374 ITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGV 433 G+ + G+ G + S + + G + L+ D ER ++ L Sbjct: 127 SNRGGVTGDIQ-GLRGFIPNSHL----VDKNIDDL--MGQLLTVNFLEFDQERRKLVLSQ 179 Query: 434 KQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATL 493 + A+ + GA+V+G V + G VEL DG+ G L S+ S VE Sbjct: 180 RYAAQAEV---MRRLSIGALVSGTVVNIKPYGVFVEL-DGMTGLLHRSQISAKPVEQIEA 235 Query: 494 VLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAF 551 + S+G V T ++ N ISLS++A ++ + Q +A A + Sbjct: 236 LFSIGQTVRVLITDIEESNNRISLSLQALEKFPGEVIEQFDAVQTNAEERVEAARKKL 293 Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats. Identities = 67/296 (22%), Positives = 124/296 (41%), Gaps = 16/296 (5%) Query: 79 FGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGI-RAFLPGS--L 135 ++ A + +E + VTG I + G V++ G F P L Sbjct: 4 EPNPAIAFSMDDFEHALTEHDYQFEQGQVVTGKIFEHLSDGVLVDIGGKSPGFSPLRDAL 63 Query: 136 VDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEV 195 + T G+ +EF +++ V +SRR + E + L + + G V Sbjct: 64 LAGETDAHTALPVGENVEFLIVRGQNAEGQVTLSRRKLAE---QRVWEDLAQAAEAGNSV 120 Query: 196 KGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRV 255 + V G D+ G+ G + + + K + +G +TV L+FD+ER ++ Sbjct: 121 QMRVTGSNRGGVTGDIQGLRGFIPNSHLVDKNIDDL-----MGQLLTVNFLEFDQERRKL 175 Query: 256 SLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKN 315 L + + + +R G ++G V N+ YG FVE+ +G+ GL+H S++ Sbjct: 176 VLSQRYAAQA---EVMRRLSIGALVSGTVVNIKPYGVFVEL-DGMTGLLHRSQIS-AKPV 230 Query: 316 IHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKI 371 + ++G V V++ DI+E RISL L+ + P + + E ++ Sbjct: 231 EQIEALFSIGQTVRVLITDIEESNNRISLSLQALEKFPGEVIEQFDAVQTNAEERV 286 >UniRef50_C4FZ56 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4FZ56_ABIDE Length = 305 Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 84/279 (30%), Positives = 146/279 (52%), Gaps = 8/279 (2%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ---G 58 + + E+S K R G +V+G V+ + + V VD G +E +P ++ N Sbjct: 10 MDDYLDELEQSFKR--LREGDLVKGPVIGVGETEVTVDLGSYAEGIVPIDELSNDPKFSI 67 Query: 59 ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 + +I VGD V+ + + ++G+G+ LLS ++A AW L A E + I VK Sbjct: 68 KADIAVGDVVNAMVLSADNGYGQVLLSIKRADNILAWDFLADAKESGQVFNVKITEAVKA 127 Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 G L GIRAF+P S + + V +T GK + ++I++D+ +V+S ++V+ E Sbjct: 128 GAVTYLKGIRAFIPASGLALEYVENTEDFVGKHISVRIIEVDEDDKKLVLSAKSVLREEE 187 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNV 237 + + ++ + + G V G V+ L +YGAFV L G+ GL+HI+ M+ +R+KHP E+V+ Sbjct: 188 AKKTEEKMSKVAIGTVVTGKVERLENYGAFVRLPDGLSGLVHISQMSERRIKHPKEVVSE 247 Query: 238 GDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPE 276 DE+ V + + ++SL + + E V P Sbjct: 248 NDEVKVMITDI--KDGKLSLSMTKAVESEVVDDTDSIPV 284 Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 69/290 (23%), Positives = 122/290 (42%), Gaps = 13/290 (4%) Query: 272 KRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVM 331 KR EG + G V + + V++ EG+V + E+ K + + VGDVV M Sbjct: 22 KRLREGDLVKGPVIGVGETEVTVDLGSYAEGIVPIDELSNDPKFSIKAD-IAVGDVVNAM 80 Query: 332 VLDIDEERRRISLGLKQCKAN-PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGL 390 VL D ++ L +K+ W A+ G KI G + GI Sbjct: 81 VLSADNGYGQVLLSIKRADNILAWDFLADAKESGQVFNVKITEAVKAGA-VTYLKGIRAF 139 Query: 391 VHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLG----VKQLAEDPFNNWVA 446 + S ++ E G I+ +++VD + +++ L +++ ++ Sbjct: 140 IPASGLALEYV-ENTEDF--VGKHISVRIIEVDEDDKKLVLSAKSVLREEEAKKTEEKMS 196 Query: 447 LNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFT 506 G +VTGKV ++ GA V L DG+ G + S+ S R++ V+S DEV+ T Sbjct: 197 KVAIGTVVTGKVERLENYGAFVRLPDGLSGLVHISQMSERRIKHPKEVVSENDEVKVMIT 256 Query: 507 GVDRKNRAISLSV-RAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAAK 555 + K+ +SLS+ +A + D + + + + A+ K K Sbjct: 257 DI--KDGKLSLSMTKAVESEVVDDTDSIPVEYSTGDSPTTSFADLLKGIK 304 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 59/286 (20%), Positives = 120/286 (41%), Gaps = 13/286 (4%) Query: 171 RAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVK 229 + + E +Q + L+EG VKG V + + VDLG +G++ I +++ Sbjct: 6 KIESMDDYLDELEQSFKRLREGDLVKGPVIGVGETEVTVDLGSYAEGIVPIDELSNDPKF 65 Query: 230 HPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLG-EDPWVAIAKRYPEGTKLTGRVTNLT 288 + VGD + VL D +V L +K+ W +A G ++T Sbjct: 66 SIKADIAVGDVVNAMVLSADNGYGQVLLSIKRADNILAWDFLADAKESGQVFNVKITEAV 125 Query: 289 DYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLG--- 345 G V +G+ + S + + V G + V ++++DE+ +++ L Sbjct: 126 KAGA-VTYLKGIRAFIPASGLALEY-VENTEDFV--GKHISVRIIEVDEDDKKLVLSAKS 181 Query: 346 -LKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEE 404 L++ +A ++ G V GK++ + ++G F+ L G+ GLVH+S +S + Sbjct: 182 VLREEEAKKTEEKMSKVAIGTVVTGKVERLENYGAFVRLPDGLSGLVHISQMS-ERRIKH 240 Query: 405 AVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKK 450 + DE+ ++ + + ++SL + + E + Sbjct: 241 PKEVVSENDEVKVMITDI--KDGKLSLSMTKAVESEVVDDTDSIPV 284 Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 57/269 (21%), Positives = 111/269 (41%), Gaps = 15/269 (5%) Query: 102 YEDAETVTGVINGKVKGGFTVELNGI-RAFLPGSLV--DVRPVRDTLHLEGKELEFKVIK 158 + + V G + G + TV+L +P + D + G + V+ Sbjct: 24 LREGDLVKGPVIGVGETEVTVDLGSYAEGIVPIDELSNDPKFSIKADIAVGDVVNAMVLS 83 Query: 159 LDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLL 218 D V++S + E+ G + GA L G+ + Sbjct: 84 ADNGYGQVLLSIKRADNILAWDFLADAKES---GQVFNVKITEAVKAGAVTYLKGIRAFI 140 Query: 219 HITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLG----EDPWVAIAKRY 274 + +A + V++ + VG I+V++++ D + ++ L K + + Sbjct: 141 PASGLALEYVENTEDF--VGKHISVRIIEVDEDDKKLVLSAKSVLREEEAKKTEEKMSKV 198 Query: 275 PEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLD 334 GT +TG+V L +YG FV + +G+ GLVH+S+M + HP +VV+ D V+VM+ D Sbjct: 199 AIGTVVTGKVERLENYGAFVRLPDGLSGLVHISQMS-ERRIKHPKEVVSENDEVKVMITD 257 Query: 335 IDEERRRISLGLKQCKANPWQQFAETHNK 363 I + ++SL + + + ++ Sbjct: 258 I--KDGKLSLSMTKAVESEVVDDTDSIPV 284 Score = 92.3 bits (228), Expect = 5e-17, Method: Composition-based stats. Identities = 39/202 (19%), Positives = 83/202 (41%), Gaps = 5/202 (2%) Query: 352 NPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKK 411 + +Q + +GD V+G + + + + + L +G+V + ++S N + Sbjct: 15 DELEQSFKRLREGDLVKGPVIGVGETEVTVDLGSYAEGIVPIDELS-NDPKFSIKADIAV 73 Query: 412 GDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKK-GAIVTGKVTAVDAKGATVEL 470 GD + A+VL D ++ L +K+ +++A K+ G + K+T GA V Sbjct: 74 GDVVNAMVLSADNGYGQVLLSIKRADNILAWDFLADAKESGQVFNVKITEAVKAGA-VTY 132 Query: 471 ADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDA 530 G+ ++ AS + + VE+ VG + + VD ++ + LS ++ +E Sbjct: 133 LKGIRAFIPASGLALEYVENTEDF--VGKHISVRIIEVDEDDKKLVLSAKSVLREEEAKK 190 Query: 531 IATVNKQEDANFSNNAMAEAFK 552 + E + Sbjct: 191 TEEKMSKVAIGTVVTGKVERLE 212 Score = 63.8 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 62/180 (34%), Gaps = 6/180 (3%) Query: 19 RPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQ-VGDEVDVALDAVED 77 G + + K + + IPA E VG + V + V++ Sbjct: 112 ESGQVFNVKITEAVKAGAVTYLKG-IRAFIPASGLALEYVENTEDFVGKHISVRIIEVDE 170 Query: 78 GFGETLLSREKAKRHEAWITLEKAYED---AETVTGVINGKVKGGFTVEL-NGIRAFLPG 133 + +LS + R E E+ VTG + G V L +G+ + Sbjct: 171 DDKKLVLSAKSVLREEEAKKTEEKMSKVAIGTVVTGKVERLENYGAFVRLPDGLSGLVHI 230 Query: 134 SLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGM 193 S + R ++ + + E KV+ D K + +S +ESE + D + G Sbjct: 231 SQMSERRIKHPKEVVSENDEVKVMITDIKDGKLSLSMTKAVESEVVDDTDSIPVEYSTGD 290 >UniRef50_O33698 30S ribosomal protein S1 n=12 Tax=Cyanobacteria RepID=RS1_SYNE7 Length = 295 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 72/273 (26%), Positives = 124/273 (45%), Gaps = 14/273 (5%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA---QGE 59 + FA E + ++++ G +VRG V D +D G K+ + +P + E Sbjct: 12 DDFALALEA--QSLDSQKGQLVRGKVCEYSTDGAYIDIGGKAPAFLPKREAALHAVLDLE 69 Query: 60 LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGG 119 + +E++ + ++ G+ +S +AW + + E +TV + G KGG Sbjct: 70 AHLPKDEELEFLVIRDQNEDGQVTVSLRALALEQAWTRVAELQEGGQTVQVKVTGSNKGG 129 Query: 120 FTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 T +L G+RAF+P S ++ + D L+GK L +++++ +V+S R Sbjct: 130 VTADLEGLRAFIPRSHLNEK--EDLDSLKGKTLTVAFLEVNRADKKLVLSERQAA----- 182 Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGD 239 R L+ ++ G + G V L +G FVDLGG LL I ++ K V I +GD Sbjct: 183 --RTALVREIEVGQLINGKVTGLKPFGVFVDLGGATALLPINQISQKFVADVGAIFKIGD 240 Query: 240 EITVKVLKFDRERTRVSLGLKQLGEDPWVAIAK 272 I V+ D + R+SL K L P + Sbjct: 241 PIQALVVAIDNTKGRISLSTKVLENHPGEILEN 273 Score = 158 bits (401), Expect = 4e-37, Method: Composition-based stats. Identities = 59/251 (23%), Positives = 106/251 (42%), Gaps = 13/251 (5%) Query: 192 GMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDR 250 G V+G V + GA++D+GG L + A V + +E+ V++ Sbjct: 28 GQLVRGKVCEYSTDGAYIDIGGKAPAFLPKREAALHAVLDLEAHLPKDEELEFLVIRDQN 87 Query: 251 ERTRVSLGLKQL-GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEM 309 E +V++ L+ L E W +A+ G + +VT G ++E G+ + S + Sbjct: 88 EDGQVTVSLRALALEQAWTRVAELQEGGQTVQVKVTGSNKGGVTADLE-GLRAFIPRSHL 146 Query: 310 DWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEG 369 + G + V L+++ +++ L +Q G + G Sbjct: 147 NEKEDLDSLK-----GKTLTVAFLEVNRADKKLVLSERQAARTALV---REIEVGQLING 198 Query: 370 KIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERI 429 K+ + FG+F+ L GG L+ ++ IS + +K GD I A+V+ +D + RI Sbjct: 199 KVTGLKPFGVFVDL-GGATALLPINQISQKFVA-DVGAIFKIGDPIQALVVAIDNTKGRI 256 Query: 430 SLGVKQLAEDP 440 SL K L P Sbjct: 257 SLSTKVLENHP 267 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 97/255 (38%), Gaps = 12/255 (4%) Query: 275 PEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLD 334 +G + G+V + G +++I + E + + + + +E +V+ Sbjct: 26 QKGQLVRGKVCEYSTDGAYIDIGGKAPAFLPKREAAL-HAVLDLEAHLPKDEELEFLVIR 84 Query: 335 IDEERRRISLGLKQCKANPWQQFAETHNKG-DRVEGKIKSITDFGIFIGLDGGIDGLVHL 393 E ++++ L+ +G V+ K+ G+ L+ G+ + Sbjct: 85 DQNEDGQVTVSLRALALEQAWTRVAELQEGGQTVQVKVTGSNKGGVTADLE-GLRAFIPR 143 Query: 394 SDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAI 453 S ++ + G + L+V+ +++ L +Q A + G + Sbjct: 144 SHLNEKEDLDSLK-----GKTLTVAFLEVNRADKKLVLSERQAARTALVR---EIEVGQL 195 Query: 454 VTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNR 513 + GKVT + G V+L G L ++ S+ V D + +GD ++A +D Sbjct: 196 INGKVTGLKPFGVFVDLG-GATALLPINQISQKFVADVGAIFKIGDPIQALVVAIDNTKG 254 Query: 514 AISLSVRAKDEADEK 528 ISLS + + + Sbjct: 255 RISLSTKVLENHPGE 269 Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 38/89 (42%) Query: 449 KKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGV 508 +KG +V GKV GA +++ +L EA+ V D L +E+E Sbjct: 26 QKGQLVRGKVCEYSTDGAYIDIGGKAPAFLPKREAALHAVLDLEAHLPKDEELEFLVIRD 85 Query: 509 DRKNRAISLSVRAKDEADEKDAIATVNKQ 537 ++ +++S+RA +A + + Sbjct: 86 QNEDGQVTVSLRALALEQAWTRVAELQEG 114 >UniRef50_P74142 30S ribosomal protein S1 homolog B n=14 Tax=Cyanobacteria RepID=RS1B_SYNY3 Length = 305 Score = 201 bits (511), Expect = 7e-50, Method: Composition-based stats. Identities = 66/273 (24%), Positives = 130/273 (47%), Gaps = 14/273 (5%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQF---KNAQGE 59 + FA+ ++ + G V G + + V VD G KS +P ++ +A+ E Sbjct: 13 DEFAKALDKH--DYHAEKGQTVHGKICQHANEGVYVDFGGKSPGFVPVQELGLRPHAEIE 70 Query: 60 LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGG 119 + D + + ++ G+ LSR + + ++W L + E +T+ V+ G KGG Sbjct: 71 DSFPLDSAWDFLVTSEQNDEGQVRLSRRQLQIQQSWENLAELEESGKTLEMVVTGTNKGG 130 Query: 120 FTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 ++ G+R F+P S + + L G+ L+ +++ +Q N +V+++R + Sbjct: 131 VVGDVEGLRGFIPRSHLM--HKDNMDALVGQVLKAHILEANQDNNKLVLTQRRI------ 182 Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGD 239 ++ + + + G +G V + YG FV++ GV GLLH++ ++ RV + + G Sbjct: 183 -QQAESMGKIAAGNIYEGKVAKIQPYGVFVEIEGVTGLLHVSQVSGTRVDSLNTLFAFGQ 241 Query: 240 EITVKVLKFDRERTRVSLGLKQLGEDPWVAIAK 272 I+V V + D + R+SL + L P + K Sbjct: 242 AISVYVQEIDEYKNRISLSTRILETYPGELVEK 274 Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats. Identities = 44/257 (17%), Positives = 95/257 (36%), Gaps = 12/257 (4%) Query: 273 RYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMV 332 +G + G++ + G +V+ G V V E+ + + + +V Sbjct: 25 HAEKGQTVHGKICQHANEGVYVDFGGKSPGFVPVQELGL-RPHAEIEDSFPLDSAWDFLV 83 Query: 333 LDIDEERRRISLGLKQCKANPWQQFAETHNK-GDRVEGKIKSITDFGIFIGLDGGIDGLV 391 + ++ L +Q + + + G +E + G+ ++ G+ G + Sbjct: 84 TSEQNDEGQVRLSRRQLQIQQSWENLAELEESGKTLEMVVTGTNKGGVVGDVE-GLRGFI 142 Query: 392 HLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKG 451 S + + G + A +L+ + + ++ L +++ + + G Sbjct: 143 PRSHLMHKDNMDAL-----VGQVLKAHILEANQDNNKLVLTQRRIQQAES---MGKIAAG 194 Query: 452 AIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRK 511 I GKV + G VE+ +GV G L S+ S RV+ + + G + +D Sbjct: 195 NIYEGKVAKIQPYGVFVEI-EGVTGLLHVSQVSGTRVDSLNTLFAFGQAISVYVQEIDEY 253 Query: 512 NRAISLSVRAKDEADEK 528 ISLS R + + Sbjct: 254 KNRISLSTRILETYPGE 270 Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 53/251 (21%), Positives = 105/251 (41%), Gaps = 13/251 (5%) Query: 192 GMEVKGIVKNLTDYGAFVDLGGVD-GLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDR 250 G V G + + G +VD GG G + + ++ + + + V Sbjct: 29 GQTVHGKICQHANEGVYVDFGGKSPGFVPVQELGLRPHAEIEDSFPLDSAWDFLVTSEQN 88 Query: 251 ERTRVSLGLKQLG-EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEM 309 + +V L +QL + W +A+ G L VT G ++E G+ G + S + Sbjct: 89 DEGQVRLSRRQLQIQQSWENLAELEESGKTLEMVVTGTNKGGVVGDVE-GLRGFIPRSHL 147 Query: 310 DWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEG 369 + VG V++ +L+ +++ ++ L ++ + G+ EG Sbjct: 148 MHKDNMDAL-----VGQVLKAHILEANQDNNKLVLTQRRIQQAES---MGKIAAGNIYEG 199 Query: 370 KIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERI 429 K+ I +G+F+ ++ G+ GL+H+S +S + + G I+ V ++D + RI Sbjct: 200 KVAKIQPYGVFVEIE-GVTGLLHVSQVSGTRV-DSLNTLFAFGQAISVYVQEIDEYKNRI 257 Query: 430 SLGVKQLAEDP 440 SL + L P Sbjct: 258 SLSTRILETYP 268 Score = 80.0 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 36/188 (19%), Positives = 70/188 (37%), Gaps = 7/188 (3%) Query: 352 NPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKK 411 + KG V GKI + G+++ G G V + ++ E + Sbjct: 17 KALDKHDYHAEKGQTVHGKICQHANEGVYVDFGGKSPGFVPVQEL-GLRPHAEIEDSFPL 75 Query: 412 GDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKK-GAIVTGKVTAVDAKGATVEL 470 +V + ++ L +QL +A ++ G + VT + G ++ Sbjct: 76 DSAWDFLVTSEQNDEGQVRLSRRQLQIQQSWENLAELEESGKTLEMVVTGTNKGGVVGDV 135 Query: 471 ADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDA 530 +G+ G++ S +D L VG ++A ++ N + L+ R +A+ Sbjct: 136 -EGLRGFIPRSHLMH---KDNMDAL-VGQVLKAHILEANQDNNKLVLTQRRIQQAESMGK 190 Query: 531 IATVNKQE 538 IA N E Sbjct: 191 IAAGNIYE 198 >UniRef50_UPI0000E4A1DE PREDICTED: hypothetical protein n=2 Tax=Strongylocentrotus purpuratus RepID=UPI0000E4A1DE Length = 1545 Score = 199 bits (505), Expect = 3e-49, Method: Composition-based stats. Identities = 98/605 (16%), Positives = 191/605 (31%), Gaps = 83/605 (13%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVV--VAIDKDVVLVDAGLKSESAIPAEQFKNAQG 58 M++ F S G +R V V ++K LV +K+ Sbjct: 586 MSDEFV-----SDTSKLYEVGQTLRAKVTEVNVEKKRFLVSL--------KTSDWKSP-- 630 Query: 59 ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETV------TGVI 112 +VGD ++ + ++ LS + + K + + V G + Sbjct: 631 ----KVGDSIEACVMNIDLSSKAVTLSLKPDTIEGCKKSKSKGKKGKKAVASLAEDKGKV 686 Query: 113 NGKVKGGFTVELN-GIRAFLPG-SLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSR 170 + G +L ++ V+ G + R + + Sbjct: 687 LMVKSEFILAQTGQGKLVYLSAKQHLNNFSVQKDAIKIGDTVTIGDSSFVDGRFLAALVK 746 Query: 171 RAVIESENSAERDQL----LENLQEGMEVKGIVKNLTDYGAFVDLGGVDG--LLHITDMA 224 + ER G V +VK++ + +++ G G +H T+++ Sbjct: 747 EDKPSKKKEKERKSAAVHDTSQKLVGQIVDAVVKSVKESQVNIEIEGGQGYGRIHATEVS 806 Query: 225 W--KRVKHPSEIVNVGDEITVKVLKFDRERT--------------RVSLGLKQL------ 262 K +P E +G ++ KV+ R + + L ++ Sbjct: 807 DTMKPGSYPLEFFTIGQKVKAKVIGCRRGKRGQHLAVSHGHGALSLLELSTRKSVMEADS 866 Query: 263 ---GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMD-WTNKNIHP 318 + + G +T + +V + +EG +H + + +P Sbjct: 867 VPSEDQSSENEMNAFQIGQTVTCIINRFHKEILWVHLSRSLEGKIHRLNLSKHASTLENP 926 Query: 319 SKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFG 378 G V V+ D E + L + A T G V K+ I + Sbjct: 927 ESYFKPGQVHRAKVVRQDNEHNMLELSMSG-------CIATTFEVGSVVNCKVTKILENK 979 Query: 379 IFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAE 438 + L G+ G + +DI ++ E + ++ + + + S+ ++ Sbjct: 980 AQVQLPYGLQGSMFATDI-DDIYQENPLERFEHHKYHRCCISEASTGKHGASVSMRPSQV 1038 Query: 439 DPFNNWV---------ALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVE 489 KKG +V G V KG V L+ + G + + S V+ Sbjct: 1039 KKATPPSGYDLEIRTLDDLKKGQVVRGYVRHCSEKGVFVSLSSNLHGRILLKKLSAFYVK 1098 Query: 490 DATLVLSVGDEVEAKFTGVDRKNRAISLSVRAK-----DEADEKDAIATVNKQEDANFSN 544 D + V +VG + K +D+K+ I LS +K D E A V ++ D Sbjct: 1099 DPSAVFTVGKLLSTKVLSIDKKSGKIELSSSSKDTGLEDPVPEDQRQAGVKRKRDGTKKG 1158 Query: 545 NAMAE 549 E Sbjct: 1159 KKSTE 1163 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 79/500 (15%), Positives = 165/500 (33%), Gaps = 82/500 (16%) Query: 102 YEDAETVTGVINGKVKGGFTV--ELNGIRAFLPGSLVDVRP-VRDT---LHLEGKELE-F 154 D E V I+ + G V AF+P + + P + D + EG ++ Sbjct: 455 LSDKEIVKVKISKVKQDGLEVIQLPGNKPAFIPKTHLSDHPDICDALLASYSEGDVIDQA 514 Query: 155 KVIKLDQKRNNVVVSRRAVIESENSAERD--QLLENLQEGMEVKGIVKNLTDYGAFVDLG 212 K +V+ + ++ + + + + L+ M + G++++ YG FV+ Sbjct: 515 LTWSYSGKSRTCIVTCKPLLLNAARNKTEIVRDFSELETNMFLIGVLRHTMSYGVFVEFP 574 Query: 213 -GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLG-------- 263 + GL M+ + V S++ VG + KV + + E+ R + LK Sbjct: 575 NHIVGLAPKAMMSDEFVSDTSKLYEVGQTLRAKVTEVNVEKKRFLVSLKTSDWKSPKVGD 634 Query: 264 ---------EDPWVAIAKRYPEGTK----------------------LTGRVTNLTDYGC 292 + A+ T G+V + Sbjct: 635 SIEACVMNIDLSSKAVTLSLKPDTIEGCKKSKSKGKKGKKAVASLAEDKGKVLMVKSEFI 694 Query: 293 FVEIEEG----VEGLVHVSEMDWTNKNIHPSKVVNVGDV--VEVMVLDIDEERRRISLGL 346 + +G + H++ I V +GD V+ L + + S Sbjct: 695 LAQTGQGKLVYLSAKQHLNNFSVQKDAIKIGDTVTIGDSSFVDGRFLAALVKEDKPSKKK 754 Query: 347 KQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGI-DGLVHLSDISWN-VAGEE 404 ++ + + G V+ +KS+ + + I ++GG G +H +++S G Sbjct: 755 EKERKSAAVHDTSQKLVGQIVDAVVKSVKESQVNIEIEGGQGYGRIHATEVSDTMKPGSY 814 Query: 405 AVREYKKGDEIAAVVLQVDAERER--------------ISLGVK---------QLAEDPF 441 + + G ++ A V+ + + L + + Sbjct: 815 PLEFFTIGQKVKAKVIGCRRGKRGQHLAVSHGHGALSLLELSTRKSVMEADSVPSEDQSS 874 Query: 442 NNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASR--DRVEDATLVLSVGD 499 N + + G VT + + V L+ +EG + S+ +E+ G Sbjct: 875 ENEMNAFQIGQTVTCIINRFHKEILWVHLSRSLEGKIHRLNLSKHASTLENPESYFKPGQ 934 Query: 500 EVEAKFTGVDRKNRAISLSV 519 AK D ++ + LS+ Sbjct: 935 VHRAKVVRQDNEHNMLELSM 954 Score = 95.4 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 29/193 (15%), Positives = 69/193 (35%), Gaps = 10/193 (5%) Query: 340 RRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFI-GLDGGIDGLVHLSDISW 398 R + ++ + + + + V+ KI + G+ + L G + + +S Sbjct: 435 NRDGMSERKAQGTEMPPWQ-RLSDKEIVKVKISKVKQDGLEVIQLPGNKPAFIPKTHLSD 493 Query: 399 NVAGEE-AVREYKKGDEIAAVVL-QVDAERERISLGVKQ------LAEDPFNNWVALNKK 450 + + + Y +GD I + + + K + + + Sbjct: 494 HPDICDALLASYSEGDVIDQALTWSYSGKSRTCIVTCKPLLLNAARNKTEIVRDFSELET 553 Query: 451 GAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDR 510 + G + + G VE + + G + S + V D + + VG + AK T V+ Sbjct: 554 NMFLIGVLRHTMSYGVFVEFPNHIVGLAPKAMMSDEFVSDTSKLYEVGQTLRAKVTEVNV 613 Query: 511 KNRAISLSVRAKD 523 + + +S++ D Sbjct: 614 EKKRFLVSLKTSD 626 >UniRef50_C4G9K7 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4G9K7_9FIRM Length = 294 Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats. Identities = 76/253 (30%), Positives = 129/253 (50%), Gaps = 6/253 (2%) Query: 15 EIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQ---VGDEVDVA 71 I+ G IV V+ + V VD I E +G + G + Sbjct: 2 SIKYEVGDIVNCEVLGVSDHEVSVDLNAGKIGIIAFEDLSEEEGYDPHKHLRNGKHLTAQ 61 Query: 72 LDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFL 131 + +++DG G LS A+ +AW L+ A+ ET+T + +VKGG L G+RAF+ Sbjct: 62 ITSLDDGRGNIRLSVNAARHTDAWDQLKDAHSANETLTVHVREQVKGGVVAYLKGLRAFI 121 Query: 132 PGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQE 191 P S + V + G++LE K+ ++ + +V+S RAV + + E+ L+ L+ Sbjct: 122 PASQLAASYVDNLADFVGRDLEVKIDSIEPAKRRLVLSARAVEQEKKRLEQQAKLDALEV 181 Query: 192 GMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDR 250 G V+G V L D+GAFV++ G+DGL+HI+ ++ KRV+ + + VG ++ VK+ Sbjct: 182 GSIVEGTVARLKDFGAFVNIADGLDGLVHISQISLKRVEKVEDALRVGQKVRVKITGM-- 239 Query: 251 ERTRVSLGLKQLG 263 + +VSL +K + Sbjct: 240 KDGKVSLSMKAVE 252 Score = 175 bits (445), Expect = 3e-42, Method: Composition-based stats. Identities = 57/290 (19%), Positives = 122/290 (42%), Gaps = 12/290 (4%) Query: 273 RYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMV 332 +Y G + V ++D+ V++ G G++ ++ + P K + G + + Sbjct: 4 KYEVGDIVNCEVLGVSDHEVSVDLNAGKIGIIAFEDLSEE-EGYDPHKHLRNGKHLTAQI 62 Query: 333 LDIDEERRRISLGLKQCKA-NPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLV 391 +D+ R I L + + + W Q + H+ + + ++ G+ + G+ + Sbjct: 63 TSLDDGRGNIRLSVNAARHTDAWDQLKDAHSANETLTVHVREQVKGGV-VAYLKGLRAFI 121 Query: 392 HLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVAL---- 447 S ++ + + G ++ + ++ + R+ L + + ++ Sbjct: 122 PASQLAASYV-DNLADF--VGRDLEVKIDSIEPAKRRLVLSARAVEQEKKRLEQQAKLDA 178 Query: 448 NKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTG 507 + G+IV G V + GA V +ADG++G + S+ S RVE L VG +V K TG Sbjct: 179 LEVGSIVEGTVARLKDFGAFVNIADGLDGLVHISQISLKRVEKVEDALRVGQKVRVKITG 238 Query: 508 VDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAAKGE 557 K+ +SLS++A + + A K +D + A E+ + + Sbjct: 239 --MKDGKVSLSMKAVELLERPSKEAAARKAQDEQVARYADRESTGTSLAD 286 Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats. Identities = 56/257 (21%), Positives = 106/257 (41%), Gaps = 15/257 (5%) Query: 101 AYEDAETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRPVRDTLHLE--GKELEFKVI 157 YE + V + G +V+LN G + + D GK L ++ Sbjct: 4 KYEVGDIVNCEVLGVSDHEVSVDLNAGKIGIIAFEDLSEEEGYDPHKHLRNGKHLTAQIT 63 Query: 158 KLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGL 217 LD R N+ +S A ++ DQL + + V+ G L G+ Sbjct: 64 SLDDGRGNIRLSVNAA---RHTDAWDQLKDAHSANETLTVHVREQVKGGVVAYLKGLRAF 120 Query: 218 LHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPW----VAIAKR 273 + + +A V + ++ VG ++ VK+ + + R+ L + + ++ A Sbjct: 121 IPASQLAASYVDNLADF--VGRDLEVKIDSIEPAKRRLVLSARAVEQEKKRLEQQAKLDA 178 Query: 274 YPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVL 333 G+ + G V L D+G FV I +G++GLVH+S++ + + VG V V + Sbjct: 179 LEVGSIVEGTVARLKDFGAFVNIADGLDGLVHISQISL-KRVEKVEDALRVGQKVRVKIT 237 Query: 334 DIDEERRRISLGLKQCK 350 + + ++SL +K + Sbjct: 238 GM--KDGKVSLSMKAVE 252 Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 36/198 (18%), Positives = 75/198 (37%), Gaps = 5/198 (2%) Query: 357 FAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIA 416 + + GD V ++ ++D + + L+ G G++ D+S G + + + G + Sbjct: 1 MSIKYEVGDIVNCEVLGVSDHEVSVDLNAGKIGIIAFEDLS-EEEGYDPHKHLRNGKHLT 59 Query: 417 AVVLQVDAERERISLGV-KQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVE 475 A + +D R I L V D ++ + +T V G L G+ Sbjct: 60 AQITSLDDGRGNIRLSVNAARHTDAWDQLKDAHSANETLTVHVREQVKGGVVAYLK-GLR 118 Query: 476 GYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVN 535 ++ AS+ + V++ VG ++E K ++ R + LS RA ++ ++ Sbjct: 119 AFIPASQLAASYVDNLADF--VGRDLEVKIDSIEPAKRRLVLSARAVEQEKKRLEQQAKL 176 Query: 536 KQEDANFSNNAMAEAFKA 553 + K Sbjct: 177 DALEVGSIVEGTVARLKD 194 Score = 71.9 bits (175), Expect = 6e-11, Method: Composition-based stats. Identities = 27/178 (15%), Positives = 65/178 (36%), Gaps = 8/178 (4%) Query: 21 GSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQ-VGDEVDVALDAVEDGF 79 + V K V+ + IPA Q + + VG +++V +D++E Sbjct: 95 NETLTVHVREQVKGGVVAYLKG-LRAFIPASQLAASYVDNLADFVGRDLEVKIDSIEPAK 153 Query: 80 GETLLSREKAKRHEAW---ITLEKAYEDAETVTGVINGKVKGGFTVEL-NGIRAFLPGSL 135 +LS ++ + A E V G + G V + +G+ + S Sbjct: 154 RRLVLSARAVEQEKKRLEQQAKLDALEVGSIVEGTVARLKDFGAFVNIADGLDGLVHISQ 213 Query: 136 VDVRPVRDTLH--LEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQE 191 + ++ V G+++ K+ + + ++ + ++E + + ++ Q Sbjct: 214 ISLKRVEKVEDALRVGQKVRVKITGMKDGKVSLSMKAVELLERPSKEAAARKAQDEQV 271 Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 37/105 (35%), Gaps = 3/105 (2%) Query: 6 AQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQGELEI 62 + E+ K GSIV G V + V+ + + Q + E + Sbjct: 167 KKRLEQQAKLDALEVGSIVEGTVARLKDFGAFVNIADGLDGLVHISQISLKRVEKVEDAL 226 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAET 107 +VG +V V + ++DG + + + + +D + Sbjct: 227 RVGQKVRVKITGMKDGKVSLSMKAVELLERPSKEAAARKAQDEQV 271 >UniRef50_B7FU58 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FU58_PHATR Length = 284 Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats. Identities = 70/284 (24%), Positives = 137/284 (48%), Gaps = 14/284 (4%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK---NAQGE 59 + FA+ +E E ++V+G V LVD G K+ + +P ++ + E Sbjct: 8 DEFAKAVDE--TEYGFERNAVVQGTAVEYSGSGCLVDIGAKASAYLPDQEASLDQDLNIE 65 Query: 60 LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGG 119 + + ++ + + ED G+ L+S ++ + +AW + E+ + + + +GG Sbjct: 66 DAVPLDTPMEFQIISEEDENGQLLVSIKRIEYKKAWEKVLSMAEEDQILEAKVIAVNRGG 125 Query: 120 FTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 + G+RAFLPGS + + + L G L+ K ++++Q+ N +VVS R + + Sbjct: 126 AICLVEGLRAFLPGSHLTGQLPDE--DLIGNNLQLKFLEVNQETNKLVVSNRKAVVEQQ- 182 Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGD 239 + +L G V G+VK L YGAFV++GG+ GLLHI+ +++ R+ +++ G Sbjct: 183 ------MADLSRGDLVAGMVKALKPYGAFVEVGGMSGLLHISQISYDRIDDLEKVLQPGM 236 Query: 240 EITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGR 283 ++ ++ D+ R++L K L +P + K Sbjct: 237 QVKCMIIDHDKVNGRIALSTKTLEPEPGDMLKDPKMVFEKAEAT 280 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 52/274 (18%), Positives = 110/274 (40%), Gaps = 12/274 (4%) Query: 274 YPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVL 333 + + G + GC V+I + E +++ V + +E ++ Sbjct: 21 FERNAVVQGTAVEYSGSGCLVDIGAKASAYLPDQEASLDQ-DLNIEDAVPLDTPMEFQII 79 Query: 334 DIDEERRRISLGLKQCK-ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVH 392 ++E ++ + +K+ + W++ + +E K+ ++ G L G+ + Sbjct: 80 SEEDENGQLLVSIKRIEYKKAWEKVLSMAEEDQILEAKVIAVNRGGAIC-LVEGLRAFLP 138 Query: 393 LSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGA 452 S ++ + E+ G+ + L+V+ E ++ + ++ +A +G Sbjct: 139 GSHLTGQLPDEDL-----IGNNLQLKFLEVNQETNKLVVSNRKAV---VEQQMADLSRGD 190 Query: 453 IVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKN 512 +V G V A+ GA VE+ G+ G L S+ S DR++D VL G +V+ D+ N Sbjct: 191 LVAGMVKALKPYGAFVEVG-GMSGLLHISQISYDRIDDLEKVLQPGMQVKCMIIDHDKVN 249 Query: 513 RAISLSVRAKDEADEKDAIATVNKQEDANFSNNA 546 I+LS + + E A + A Sbjct: 250 GRIALSTKTLEPEPGDMLKDPKMVFEKAEATAAA 283 Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats. Identities = 56/291 (19%), Positives = 120/291 (41%), Gaps = 15/291 (5%) Query: 83 LLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRPV 141 + + +A E +E V G G V++ A+LP + Sbjct: 2 SIPFSYDEFAKAVDETEYGFERNAVVQGTAVEYSGSGCLVDIGAKASAYLPDQEASLDQD 61 Query: 142 RDTLHLE--GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIV 199 + +EF++I + + ++VS + + E +++L +E ++ V Sbjct: 62 LNIEDAVPLDTPMEFQIISEEDENGQLLVSIKRI---EYKKAWEKVLSMAEEDQILEAKV 118 Query: 200 KNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGL 259 + GA + G+ L + + + P E + +G+ + +K L+ ++E ++ + Sbjct: 119 IAVNRGGAICLVEGLRAFLPGSHLTGQL---PDEDL-IGNNLQLKFLEVNQETNKLVVSN 174 Query: 260 KQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPS 319 ++ + + G + G V L YG FVE+ G+ GL+H+S++ + + Sbjct: 175 RKAVVEQQM---ADLSRGDLVAGMVKALKPYGAFVEVG-GMSGLLHISQISYD-RIDDLE 229 Query: 320 KVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGK 370 KV+ G V+ M++D D+ RI+L K + P + ++ E Sbjct: 230 KVLQPGMQVKCMIIDHDKVNGRIALSTKTLEPEPGDMLKDPKMVFEKAEAT 280 Score = 61.9 bits (149), Expect = 6e-08, Method: Composition-based stats. Identities = 26/202 (12%), Positives = 71/202 (35%), Gaps = 14/202 (6%) Query: 352 NPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKK 411 + + V+G + G + + + + S + Sbjct: 12 KAVDETEYGFERNAVVQGTAVEYSGSGCLVDIGAKASAYLPDQEASLDQDL-NIEDAVPL 70 Query: 412 GDEIAAVVLQVDAERERISLGVKQLA-EDPFNNWVALNKKGAIVTGKVTAVDAKGATVEL 470 + ++ + E ++ + +K++ + + +++ ++ I+ KV AV+ GA + L Sbjct: 71 DTPMEFQIISEEDENGQLLVSIKRIEYKKAWEKVLSMAEEDQILEAKVIAVNRGGA-ICL 129 Query: 471 ADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDA 530 +G+ +L S + +G+ ++ KF V+++ + +S + K Sbjct: 130 VEGLRAFLPGSHLTGQ----LPDEDLIGNNLQLKFLEVNQETNKLVVS-------NRKAV 178 Query: 531 IATVNKQEDANFSNNAMAEAFK 552 + M +A K Sbjct: 179 VEQQMADLSRGDLVAGMVKALK 200 >UniRef50_B8C8K9 RS1, ribosomal protein 1 (Fragment) n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8C8K9_THAPS Length = 287 Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats. Identities = 80/278 (28%), Positives = 129/278 (46%), Gaps = 16/278 (5%) Query: 4 SFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ-----G 58 SFA + IV+G VV DK +VD G K+ + +P ++ Q Sbjct: 7 SFADAVAA--TDYAFNRNDIVKGTVVQYDKGGCIVDIGAKASAYLPLQEATLFQEQGQSI 64 Query: 59 ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 E I + +E + + ED G+ L+S + + EAW + + E +G Sbjct: 65 EGIIDIDEERQFEIISEEDENGQLLVSIRRIQYREAWDKVIAKQDSDEVFEAECVSVNRG 124 Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 G + G+RAFLPGS + R D L G+ L K ++++Q+ N +VVS R + E Sbjct: 125 GAIFLVEGLRAFLPGSHLTGRLPDD--DLVGQTLPLKFLEVNQEDNKLVVSNRRAVVEEQ 182 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVG 238 + L G + GIVK L YGAFV++GG+ GLLHI+ ++ R+ +++ G Sbjct: 183 -------MAELSRGDVIDGIVKALKPYGAFVEVGGMSGLLHISQISMDRITDLEQVLQPG 235 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPE 276 +I ++ D+ R++L K L +P I Sbjct: 236 QKIKCMIIDHDKVNGRIALSTKTLEPEPGDMIKDPARV 273 Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 47/273 (17%), Positives = 108/273 (39%), Gaps = 12/273 (4%) Query: 274 YPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNK-NIHPSKVVNVGDVVEVMV 332 + + G V GC V+I + + E + ++++ + + + Sbjct: 19 FNRNDIVKGTVVQYDKGGCIVDIGAKASAYLPLQEATLFQEQGQSIEGIIDIDEERQFEI 78 Query: 333 LDIDEERRRISLGLKQCK-ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLV 391 + ++E ++ + +++ + W + + + E + S+ G I L G+ + Sbjct: 79 ISEEDENGQLLVSIRRIQYREAWDKVIAKQDSDEVFEAECVSVNRGGA-IFLVEGLRAFL 137 Query: 392 HLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKG 451 S ++ + ++ G + L+V+ E ++ + ++ +A +G Sbjct: 138 PGSHLTGRLPDDDL-----VGQTLPLKFLEVNQEDNKLVVSNRRAV---VEEQMAELSRG 189 Query: 452 AIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRK 511 ++ G V A+ GA VE+ G+ G L S+ S DR+ D VL G +++ D+ Sbjct: 190 DVIDGIVKALKPYGAFVEVG-GMSGLLHISQISMDRITDLEQVLQPGQKIKCMIIDHDKV 248 Query: 512 NRAISLSVRAKDEADEKDAIATVNKQEDANFSN 544 N I+LS + + E A+ + Sbjct: 249 NGRIALSTKTLEPEPGDMIKDPARVYEMADETA 281 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 52/286 (18%), Positives = 116/286 (40%), Gaps = 19/286 (6%) Query: 84 LSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDV---- 138 + A +A + A+ + V G + KGG V++ A+LP + Sbjct: 1 VGFSYASFADAVAATDYAFNRNDIVKGTVVQYDKGGCIVDIGAKASAYLPLQEATLFQEQ 60 Query: 139 -RPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKG 197 + + + +E +F++I + + ++VS R + + D+++ + Sbjct: 61 GQSIEGIID-IDEERQFEIISEEDENGQLLVSIRRI---QYREAWDKVIAKQDSDEVFEA 116 Query: 198 IVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSL 257 ++ GA + G+ L + + + VG + +K L+ ++E ++ + Sbjct: 117 ECVSVNRGGAIFLVEGLRAFLPGSHLTGRLPDDDL----VGQTLPLKFLEVNQEDNKLVV 172 Query: 258 GLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIH 317 ++ + + G + G V L YG FVE+ G+ GL+H+S++ + Sbjct: 173 SNRRAVVEEQM---AELSRGDVIDGIVKALKPYGAFVEVG-GMSGLLHISQISMD-RITD 227 Query: 318 PSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNK 363 +V+ G ++ M++D D+ RI+L K + P + Sbjct: 228 LEQVLQPGQKIKCMIIDHDKVNGRIALSTKTLEPEPGDMIKDPARV 273 Score = 61.1 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 27/199 (13%), Positives = 77/199 (38%), Gaps = 10/199 (5%) Query: 352 NPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDIS-WNVAGEEAVREYK 410 + N+ D V+G + G + + + L + + + G+ Sbjct: 10 DAVAATDYAFNRNDIVKGTVVQYDKGGCIVDIGAKASAYLPLQEATLFQEQGQSIEGIID 69 Query: 411 KGDEIAAVVLQVDAERERISLGVKQ-LAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVE 469 +E ++ + E ++ + +++ + ++ +A + + +V+ GA + Sbjct: 70 IDEERQFEIISEEDENGQLLVSIRRIQYREAWDKVIAKQDSDEVFEAECVSVNRGGA-IF 128 Query: 470 LADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKD 529 L +G+ +L S + +D VG + KF V++++ + +S R + Sbjct: 129 LVEGLRAFLPGSHLTGRLPDDDL----VGQTLPLKFLEVNQEDNKLVVSNRRAVVE---E 181 Query: 530 AIATVNKQEDANFSNNAMA 548 +A +++ + + A+ Sbjct: 182 QMAELSRGDVIDGIVKALK 200 >UniRef50_A9KQA3 RNA binding S1 domain protein n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KQA3_CLOPH Length = 303 Score = 194 bits (494), Expect = 6e-48, Method: Composition-based stats. Identities = 87/267 (32%), Positives = 141/267 (52%), Gaps = 9/267 (3%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ---G 58 + F E SLK G +V+G V+ I V VD SE I E+ N Sbjct: 8 MDDFKTELEHSLKR--LTEGDLVKGTVIGISDTEVTVDLSYSSEGIIKLEELSNDPRFSI 65 Query: 59 ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 + ++ +G+E+ + + ED G LLS++KA +W L+ + T ++ V G Sbjct: 66 KADVTIGEEITAMILS-EDKEGNLLLSKKKADDILSWDKLKTMMTERTVTTVKVSNAVNG 124 Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 G L GIRAF+P S++ + V D GK L+ VI D++ N +V+S + V+ E Sbjct: 125 GVVTYLEGIRAFIPASMLSLSYVEDVSTFVGKVLKVIVITADKEANKLVLSAKEVLREEE 184 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNV 237 + E+ + +Q+G+ GIV L +GAFV +G G+ GL+HI+ + KR+K P+E++ Sbjct: 185 AKEKSHKISQVQKGIVTTGIVDKLMPFGAFVSIGEGLSGLVHISQICGKRIKSPAEVLKE 244 Query: 238 GDEITVKVLKFDRERTRVSLGLKQLGE 264 G E+ VKVL D + ++SL +K + + Sbjct: 245 GQEVKVKVL--DVKDGKISLSIKAVSD 269 Score = 160 bits (406), Expect = 1e-37, Method: Composition-based stats. Identities = 63/294 (21%), Positives = 124/294 (42%), Gaps = 18/294 (6%) Query: 269 AIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVV 328 KR EG + G V ++D V++ EG++ + E+ + + V +G+ + Sbjct: 17 HSLKRLTEGDLVKGTVIGISDTEVTVDLSYSSEGIIKLEELSNDPRFSIKAD-VTIGEEI 75 Query: 329 EVMVLDIDEERRRISLGLKQCKAN-PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGI 387 M+L D+E + L K+ W + + K+ + + G+ + GI Sbjct: 76 TAMILSEDKE-GNLLLSKKKADDILSWDKLKTMMTERTVTTVKVSNAVNGGV-VTYLEGI 133 Query: 388 DGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLG----VKQLAEDPFNN 443 + S +S + + + G + +V+ D E ++ L +++ ++ Sbjct: 134 RAFIPASMLSLSYVEDVSTF---VGKVLKVIVITADKEANKLVLSAKEVLREEEAKEKSH 190 Query: 444 WVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEA 503 ++ +KG + TG V + GA V + +G+ G + S+ R++ VL G EV+ Sbjct: 191 KISQVQKGIVTTGIVDKLMPFGAFVSIGEGLSGLVHISQICGKRIKSPAEVLKEGQEVKV 250 Query: 504 KFTGVDRKNRAISLSVRAKDEADE-----KDAIATVNKQEDANFSNNAMAEAFK 552 K V K+ ISLS++A +A+E D A + E + + FK Sbjct: 251 KVLDV--KDGKISLSIKAVSDAEEVHEDAVDIPAEYSTGEQVTTGLGDLLKNFK 302 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 58/279 (20%), Positives = 108/279 (38%), Gaps = 16/279 (5%) Query: 85 SREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFLPGSLV--DVRPV 141 + K + + V G + G TV+L+ + + D R Sbjct: 5 NLTMDDFKTELEHSLKRLTEGDLVKGTVIGISDTEVTVDLSYSSEGIIKLEELSNDPRFS 64 Query: 142 RDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKN 201 G+E+ ++ D++ N ++ ++A + + E V N Sbjct: 65 IKADVTIGEEITAMILSEDKEGNLLLSKKKADDILSWDKLKTMMTER----TVTTVKVSN 120 Query: 202 LTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQ 261 + G L G+ + + ++ V+ S VG + V V+ D+E ++ L K+ Sbjct: 121 AVNGGVVTYLEGIRAFIPASMLSLSYVEDVSTF--VGKVLKVIVITADKEANKLVLSAKE 178 Query: 262 L----GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIH 317 + + +G TG V L +G FV I EG+ GLVH+S++ + Sbjct: 179 VLREEEAKEKSHKISQVQKGIVTTGIVDKLMPFGAFVSIGEGLSGLVHISQI-CGKRIKS 237 Query: 318 PSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQ 356 P++V+ G V+V VLD+ + +ISL +K Sbjct: 238 PAEVLKEGQEVKVKVLDV--KDGKISLSIKAVSDAEEVH 274 Score = 84.2 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 77/201 (38%), Gaps = 4/201 (1%) Query: 351 ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYK 410 + + +GD V+G + I+D + + L +G++ L ++S + + Sbjct: 12 KTELEHSLKRLTEGDLVKGTVIGISDTEVTVDLSYSSEGIIKLEELSNDPRF-SIKADVT 70 Query: 411 KGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVEL 470 G+EI A++L D E + K ++ + + + T KV+ G V Sbjct: 71 IGEEITAMILSEDKEGNLLLSKKKADDILSWDKLKTMMTERTVTTVKVSNAVNGGV-VTY 129 Query: 471 ADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDA 530 +G+ ++ AS S VED + VG ++ D++ + LS + +E Sbjct: 130 LEGIRAFIPASMLSLSYVEDVSTF--VGKVLKVIVITADKEANKLVLSAKEVLREEEAKE 187 Query: 531 IATVNKQEDANFSNNAMAEAF 551 + Q + + Sbjct: 188 KSHKISQVQKGIVTTGIVDKL 208 >UniRef50_B0MBX8 Putative uncharacterized protein n=7 Tax=Clostridiales RepID=B0MBX8_9FIRM Length = 309 Score = 194 bits (493), Expect = 7e-48, Method: Composition-based stats. Identities = 87/273 (31%), Positives = 148/273 (54%), Gaps = 11/273 (4%) Query: 1 MTESFAQLFEESLKEIETR-----PGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN 55 M E + E+ E+E G IV G V+++ + ++D ++ + A ++ + Sbjct: 7 MAEEMKETMEQYENELEASFRKMDEGDIVEGDVLSVSDEEAVIDLKYYAQGILKASEYSD 66 Query: 56 AQG---ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVI 112 + GD V + +V+DG G +LS+ +A + AW L+K E+ ++ + Sbjct: 67 DPNVTLTEALNEGDRVKAKVISVDDGEGNIVLSKREANQVLAWDRLQKLMEEETVLSLTV 126 Query: 113 NGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRA 172 G V GG V + GIR F+P S + + V D KE+E K+I +D+ RN +V+S + Sbjct: 127 GGVVNGGVIVYVEGIRGFIPASQLSLNYVEDLNTWLKKEVEAKIITVDESRNKLVLSAKE 186 Query: 173 VIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHP 231 V +++ E + + ++ GM ++G V+N+ YGAFVDLG G+ GL+HI+ + KR+K P Sbjct: 187 VEKAKAQEELNHKMAMMRPGMVLEGTVENIMPYGAFVDLGDGLSGLIHISQFSEKRIKSP 246 Query: 232 SEIVNVGDEITVKVLKFDRERTRVSLGLKQLGE 264 E+V G ++ VKVLK ++SL +K L E Sbjct: 247 KEMVEEGQKVKVKVLKI--ADNKISLSMKALEE 277 Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats. Identities = 64/288 (22%), Positives = 130/288 (45%), Gaps = 13/288 (4%) Query: 272 KRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVM 331 ++ EG + G V +++D ++++ +G++ SE N+ ++ +N GD V+ Sbjct: 27 RKMDEGDIVEGDVLSVSDEEAVIDLKYYAQGILKASEYSDD-PNVTLTEALNEGDRVKAK 85 Query: 332 VLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLV 391 V+ +D+ I L ++ + + + V G I GI G + Sbjct: 86 VISVDDGEGNIVLSKREANQVLAWDRLQKLMEEETVLSLTVGGVVNGGVIVYVEGIRGFI 145 Query: 392 HLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLA----EDPFNNWVAL 447 S +S N E+ K E+ A ++ VD R ++ L K++ ++ N+ +A+ Sbjct: 146 PASQLSLNYV-EDLNTWLK--KEVEAKIITVDESRNKLVLSAKEVEKAKAQEELNHKMAM 202 Query: 448 NKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTG 507 + G ++ G V + GA V+L DG+ G + S+ S R++ ++ G +V+ K Sbjct: 203 MRPGMVLEGTVENIMPYGAFVDLGDGLSGLIHISQFSEKRIKSPKEMVEEGQKVKVKVLK 262 Query: 508 VDRKNRAISLSVRAKDEADEKDAIA---TVNKQEDANFSNNAMAEAFK 552 + + ISLS++A +E+ E + + ++E A S + K Sbjct: 263 I--ADNKISLSMKALEESREAEKVETGIEYKEEEKAQTSLGDLLANLK 308 Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats. Identities = 55/272 (20%), Positives = 110/272 (40%), Gaps = 11/272 (4%) Query: 172 AVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKH 230 + E + + EG V+G V +++D A +DL G+L ++ + Sbjct: 12 KETMEQYENELEASFRKMDEGDIVEGDVLSVSDEEAVIDLKYYAQGILKASEYSDDPNVT 71 Query: 231 PSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDY 290 +E +N GD + KV+ D + L ++ + ++ E + Sbjct: 72 LTEALNEGDRVKAKVISVDDGEGNIVLSKREANQVLAWDRLQKLMEEETVLSLTVGGVVN 131 Query: 291 GCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCK 350 G + EG+ G + S++ + + VE ++ +DE R ++ L K+ + Sbjct: 132 GGVIVYVEGIRGFIPASQLSLNY-VEDLNTWLK--KEVEAKIITVDESRNKLVLSAKEVE 188 Query: 351 ----ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAV 406 G +EG +++I +G F+ L G+ GL+H+S S + Sbjct: 189 KAKAQEELNHKMAMMRPGMVLEGTVENIMPYGAFVDLGDGLSGLIHISQFSEKRI-KSPK 247 Query: 407 REYKKGDEIAAVVLQVDAERERISLGVKQLAE 438 ++G ++ VL++ +ISL +K L E Sbjct: 248 EMVEEGQKVKVKVLKI--ADNKISLSMKALEE 277 Score = 66.1 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 66/156 (42%), Gaps = 9/156 (5%) Query: 43 KSESAIPAEQFKNAQGELE-IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEK- 100 IPA Q E + EV+ + V++ + +LS ++ ++ +A L Sbjct: 140 GIRGFIPASQLSLNYVEDLNTWLKKEVEAKIITVDESRNKLVLSAKEVEKAKAQEELNHK 199 Query: 101 --AYEDAETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRPVRDTLHLE--GKELEFK 155 + G + + G V+L G+ + S + ++ + G++++ K Sbjct: 200 MAMMRPGMVLEGTVENIMPYGAFVDLGDGLSGLIHISQFSEKRIKSPKEMVEEGQKVKVK 259 Query: 156 VIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQE 191 V+K+ N + +S +A+ ES + + + +E +E Sbjct: 260 VLKI--ADNKISLSMKALEESREAEKVETGIEYKEE 293 Score = 61.5 bits (148), Expect = 9e-08, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 33/95 (34%), Gaps = 5/95 (5%) Query: 19 RPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ---GELEIQVGDEVDVALDAV 75 RPG ++ G V I VD G I QF + + ++ G +V V + + Sbjct: 204 RPGMVLEGTVENIMPYGAFVDLGDGLSGLIHISQFSEKRIKSPKEMVEEGQKVKVKVLKI 263 Query: 76 EDGFGETLLSREKAKRHEAWITLEKAYEDAETVTG 110 + LS + + +E E E Sbjct: 264 --ADNKISLSMKALEESREAEKVETGIEYKEEEKA 296 >UniRef50_B2KCI0 RNA binding S1 domain protein n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KCI0_ELUMP Length = 399 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 96/364 (26%), Positives = 181/364 (49%), Gaps = 12/364 (3%) Query: 2 TESFAQLFEESLKEIE-TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL 60 + QLF E + + IV+ VV + KD VLVD G K E IP F +G+ Sbjct: 25 EMTMDQLFAEQEELVNKLNKREIVQVTVVQVGKDSVLVDTGDKKEGYIPLSDF---EGKA 81 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 + G++V L +LS +KA+ + W +KA+++ E V G I VKGG+ Sbjct: 82 VPEAGEKVSAVLVKKGSDERHAVLSFKKAQEYLGWEIAKKAFDNKERVRGTIVSCVKGGY 141 Query: 121 TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 V++ G+ F+P SL ++ G +++ V++ +++N ++VSR+ V+E + + Sbjct: 142 IVDVFGVSGFMPLSLSELHTAYKHYLPAGAKVKCVVVEFSKEKNKLIVSRKQVLEEDEAV 201 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 RD +L ++EG ++ +V ++ G++G++ + ++AW+ + G Sbjct: 202 RRDGVLAQVKEGEVLRVVVAKADKDKLYLRFHGIEGVVTLDNVAWQDTEKAITSFRRGQR 261 Query: 241 ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE-EG 299 + K+LK D+E ++ GLKQL +P A+ +++P + G++ +T+ G V + Sbjct: 262 LKAKLLKIDKETGKLEFGLKQLFLNPADALRRKFPYKSTTKGKIVAITEEGVEVSLGKNN 321 Query: 300 VEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAE 359 +G + EM NV DV+ VMV+ I+ + ++L +K+ ++F Sbjct: 322 TKGFISQFEMGRDFDG-------NVDDVINVMVIGINPDDCSVNLSVKKYDQVQNKKFVA 374 Query: 360 THNK 363 + K Sbjct: 375 QYMK 378 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 70/410 (17%), Positives = 169/410 (41%), Gaps = 25/410 (6%) Query: 155 KVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV 214 K+ + + + + AE+++L+ L + V+ V + VD G Sbjct: 8 KIDSKQEAIQVEAAPEQEMTMDQLFAEQEELVNKLNKREIVQVTVVQVGKDSVLVDTGDK 67 Query: 215 -DGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKR 273 +G + ++D + G++++ ++K + L K+ E IAK+ Sbjct: 68 KEGYIPLSDF------EGKAVPEAGEKVSAVLVKKGSDERHAVLSFKKAQEYLGWEIAKK 121 Query: 274 -YPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMV 332 + ++ G + + G V++ GV G + + + + + G V+ +V Sbjct: 122 AFDNKERVRGTIVSCVKGGYIVDVF-GVSGFMP---LSLSELHTAYKHYLPAGAKVKCVV 177 Query: 333 LDIDEERRRISLGLKQCKANPWQQFAE----THNKGDRVEGKIKSITDFGIFIGLDGGID 388 ++ +E+ ++ + KQ + +G+ + + +++ GI+ Sbjct: 178 VEFSKEKNKLIVSRKQVLEEDEAVRRDGVLAQVKEGEVLRVVVAKADKDKLYLRF-HGIE 236 Query: 389 GLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALN 448 G+V L +++W + +++G + A +L++D E ++ G+KQL +P + Sbjct: 237 GVVTLDNVAWQDTEKAITS-FRRGQRLKAKLLKIDKETGKLEFGLKQLFLNPADALRRKF 295 Query: 449 KKGAIVTGKVTAVDAKGATVELA-DGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTG 507 + GK+ A+ +G V L + +G++ E RD + V D + G Sbjct: 296 PYKSTTKGKIVAITEEGVEVSLGKNNTKGFISQFEMGRDFDGN------VDDVINVMVIG 349 Query: 508 VDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAAKGE 557 ++ + +++LSV+ D+ K +A KQ + ++ + ++ + Sbjct: 350 INPDDCSVNLSVKKYDQVQNKKFVAQYMKQAPRPTLGQLLQDSLEESENK 399 >UniRef50_B8HSI0 RNA binding S1 domain protein n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HSI0_CYAP4 Length = 292 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 79/273 (28%), Positives = 119/273 (43%), Gaps = 14/273 (5%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEI 62 + F + E+ G VRG VV +D D +D G KS + +PA + G+ Sbjct: 7 DDFLRALEQH--GYSFEVGQTVRGKVVNLDSDGAYIDIGGKSTAFLPAHEVLVPPGKKLA 64 Query: 63 QV---GDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGG 119 V + D + +D G+ LS ++ + W + E + + G KGG Sbjct: 65 DVLPLRSDRDFLIIRGQDAEGQISLSLKRLEIKALWERYQSLQESQGAIDVRVTGVNKGG 124 Query: 120 FTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 TV+ GIR F+P + V L G+ L +++ D +R +V S++ Sbjct: 125 LTVDAKGIRGFIPRTHVVG--AETLESLVGQTLTVTILEADPERKRLVCSQKIA------ 176 Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGD 239 R Q L+ G V+G V+++ YG +DL GV GLLHI D + KRV V VG Sbjct: 177 -RRQQRLQEFDYGQLVQGTVRDIRPYGLMIDLTGVLGLLHINDFSEKRVGSLQAHVQVGT 235 Query: 240 EITVKVLKFDRERTRVSLGLKQLGEDPWVAIAK 272 I V D ER R+SL + L P + Sbjct: 236 PIKAIVTNLDAERGRISLSTRLLENRPGEMLDA 268 Score = 154 bits (389), Expect = 9e-36, Method: Composition-based stats. Identities = 53/276 (19%), Positives = 107/276 (38%), Gaps = 12/276 (4%) Query: 274 YPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVL 333 + G + G+V NL G +++I + E+ + V+ + + +++ Sbjct: 20 FEVGQTVRGKVVNLDSDGAYIDIGGKSTAFLPAHEV-LVPPGKKLADVLPLRSDRDFLII 78 Query: 334 DIDEERRRISLGLKQCKANPWQQFAETHNKGD-RVEGKIKSITDFGIFIGLDGGIDGLVH 392 + +ISL LK+ + + ++ + ++ ++ + G+ + GI G + Sbjct: 79 RGQDAEGQISLSLKRLEIKALWERYQSLQESQGAIDVRVTGVNKGGLTVD-AKGIRGFIP 137 Query: 393 LSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGA 452 + + E G + +L+ D ER+R+ K G Sbjct: 138 RTHVVGAETLESL-----VGQTLTVTILEADPERKRLVCSQKIARRQQRLQEFDY---GQ 189 Query: 453 IVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKN 512 +V G V + G ++L GV G L ++ S RV + VG ++A T +D + Sbjct: 190 LVQGTVRDIRPYGLMIDLT-GVLGLLHINDFSEKRVGSLQAHVQVGTPIKAIVTNLDAER 248 Query: 513 RAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMA 548 ISLS R + + A + +A + MA Sbjct: 249 GRISLSTRLLENRPGEMLDAFDHVMAEAEERADRMA 284 Score = 145 bits (366), Expect = 5e-33, Method: Composition-based stats. Identities = 64/255 (25%), Positives = 113/255 (44%), Gaps = 13/255 (5%) Query: 188 NLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSEIVNVGDEITVKVL 246 + + G V+G V NL GA++D+GG L ++ K ++++ + + ++ Sbjct: 19 SFEVGQTVRGKVVNLDSDGAYIDIGGKSTAFLPAHEVLVPPGKKLADVLPLRSDRDFLII 78 Query: 247 KFDRERTRVSLGLKQLGEDPWVAIAKRYPEGT-KLTGRVTNLTDYGCFVEIEEGVEGLVH 305 + ++SL LK+L + E + RVT + G V+ +G+ G + Sbjct: 79 RGQDAEGQISLSLKRLEIKALWERYQSLQESQGAIDVRVTGVNKGGLTVD-AKGIRGFIP 137 Query: 306 VSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGD 365 + + VG + V +L+ D ER+R+ K + Q + G Sbjct: 138 RTHVVGAETLESL-----VGQTLTVTILEADPERKRLVCSQKIARRQQRLQEFDY---GQ 189 Query: 366 RVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAE 425 V+G ++ I +G+ I L G+ GL+H++D S G + G I A+V +DAE Sbjct: 190 LVQGTVRDIRPYGLMIDLT-GVLGLLHINDFSEKRVG-SLQAHVQVGTPIKAIVTNLDAE 247 Query: 426 RERISLGVKQLAEDP 440 R RISL + L P Sbjct: 248 RGRISLSTRLLENRP 262 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 58/272 (21%), Positives = 105/272 (38%), Gaps = 15/272 (5%) Query: 88 KAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGI-RAFLPGSLVDVRPVRDTLH 146 A ++E +TV G + G +++ G AFLP V V P + Sbjct: 6 HDDFLRALEQHGYSFEVGQTVRGKVVNLDSDGAYIDIGGKSTAFLPAHEVLVPPGKKLAD 65 Query: 147 --LEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTD 204 + +F +I+ + +S + + L E+ + V + Sbjct: 66 VLPLRSDRDFLIIRGQDAEGQISLSLKRLEIKALWERYQSLQESQGA---IDVRVTGVNK 122 Query: 205 YGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGE 264 G VD G+ G + T + VG +TV +L+ D ER R+ K Sbjct: 123 GGLTVDAKGIRGFIPRTHVVGAETLESL----VGQTLTVTILEADPERKRLVCSQK---I 175 Query: 265 DPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNV 324 + + G + G V ++ YG +++ GV GL+H+++ + V V Sbjct: 176 ARRQQRLQEFDYGQLVQGTVRDIRPYGLMIDL-TGVLGLLHINDFS-EKRVGSLQAHVQV 233 Query: 325 GDVVEVMVLDIDEERRRISLGLKQCKANPWQQ 356 G ++ +V ++D ER RISL + + P + Sbjct: 234 GTPIKAIVTNLDAERGRISLSTRLLENRPGEM 265 Score = 81.5 bits (200), Expect = 9e-14, Method: Composition-based stats. Identities = 28/183 (15%), Positives = 65/183 (35%), Gaps = 9/183 (4%) Query: 352 NPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKK 411 +Q + G V GK+ ++ G +I + G + ++ G++ Sbjct: 11 RALEQHGYSFEVGQTVRGKVVNLDSDGAYIDIGGKSTAFLPAHEV-LVPPGKKLADVLPL 69 Query: 412 GDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGA-IVTGKVTAVDAKGATVEL 470 + ++++ +ISL +K+L ++ + +VT V+ G TV+ Sbjct: 70 RSDRDFLIIRGQDAEGQISLSLKRLEIKALWERYQSLQESQGAIDVRVTGVNKGGLTVD- 128 Query: 471 ADGVEGYLRASE-ASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKD 529 A G+ G++ + + +E VG + D + + + S + Sbjct: 129 AKGIRGFIPRTHVVGAETLESL-----VGQTLTVTILEADPERKRLVCSQKIARRQQRLQ 183 Query: 530 AIA 532 Sbjct: 184 EFD 186 >UniRef50_A5GJG3 30S ribosomal protein S1 n=1 Tax=Synechococcus sp. WH 7803 RepID=A5GJG3_SYNPW Length = 403 Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats. Identities = 60/270 (22%), Positives = 119/270 (44%), Gaps = 14/270 (5%) Query: 7 QLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA---QGELEIQ 63 +E+ G +V G V+ ++ D V VD G K+ +P + + Sbjct: 119 AALDENEPVGT--TGDVVTGTVIGMESDGVYVDIGGKAPGFMPKSECGLGVITNLKERFP 176 Query: 64 VGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVE 123 G E++V + ++ G +S ++W +++ ++ + ++G +GG T + Sbjct: 177 KGLEIEVLVTREQNADGMVTISCRALALRQSWDKVKQLEKEGKVAQVKVSGFNRGGVTCD 236 Query: 124 LNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERD 183 L G+R F+P S + + + L GK L ++++ + +V+S + + Sbjct: 237 LEGLRGFIPRSQL--QEGENHEALVGKTLGVAFLEVNPETRKLVLSEKKAATAAR----- 289 Query: 184 QLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITV 243 L+ G V+G V + YG F+DLGG+ GLLH + + ++ E+ + GD + Sbjct: 290 --FAELEVGQLVEGHVAAVKPYGLFIDLGGISGLLHQSMITGGSLRSLREVFDQGDTVKA 347 Query: 244 KVLKFDRERTRVSLGLKQLGEDPWVAIAKR 273 + + D R R++L L P + R Sbjct: 348 LITELDPGRGRIALNTAMLEGQPGELLINR 377 Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats. Identities = 61/251 (24%), Positives = 106/251 (42%), Gaps = 13/251 (5%) Query: 192 GMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDR 250 G V G V + G +VD+GG G + ++ + + E G EI V V + Sbjct: 131 GDVVTGTVIGMESDGVYVDIGGKAPGFMPKSECGLGVITNLKERFPKGLEIEVLVTREQN 190 Query: 251 ERTRVSLGLKQL-GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEM 309 V++ + L W + + EG +V+ G ++E G+ G + S++ Sbjct: 191 ADGMVTISCRALALRQSWDKVKQLEKEGKVAQVKVSGFNRGGVTCDLE-GLRGFIPRSQL 249 Query: 310 DWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEG 369 + VG + V L+++ E R++ L K+ G VEG Sbjct: 250 QEGENHEAL-----VGKTLGVAFLEVNPETRKLVLSEKKA---ATAARFAELEVGQLVEG 301 Query: 370 KIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERI 429 + ++ +G+FI L GGI GL+H S I+ + +GD + A++ ++D R RI Sbjct: 302 HVAAVKPYGLFIDL-GGISGLLHQSMITGGS-LRSLREVFDQGDTVKALITELDPGRGRI 359 Query: 430 SLGVKQLAEDP 440 +L L P Sbjct: 360 ALNTAMLEGQP 370 Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats. Identities = 53/278 (19%), Positives = 97/278 (34%), Gaps = 12/278 (4%) Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDID 336 G +TG V + G +V+I G + SE + + G +EV+V Sbjct: 131 GDVVTGTVIGMESDGVYVDIGGKAPGFMPKSECGLG-VITNLKERFPKGLEIEVLVTREQ 189 Query: 337 EERRRISLGLKQCKANPWQQFAETH-NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSD 395 +++ + + +G + K+ G+ L+ G+ G + S Sbjct: 190 NADGMVTISCRALALRQSWDKVKQLEKEGKVAQVKVSGFNRGGVTCDLE-GLRGFIPRSQ 248 Query: 396 ISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVT 455 + E G + L+V+ E ++ L K + A + G +V Sbjct: 249 LQEGENHEAL-----VGKTLGVAFLEVNPETRKLVLSEK---KAATAARFAELEVGQLVE 300 Query: 456 GKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAI 515 G V AV G ++L G+ G L S + + V GD V+A T +D I Sbjct: 301 GHVAAVKPYGLFIDLG-GISGLLHQSMITGGSLRSLREVFDQGDTVKALITELDPGRGRI 359 Query: 516 SLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKA 553 +L+ + + I +A+ N + Sbjct: 360 ALNTAMLEGQPGELLINRDAVMAEASERANRARNVLRQ 397 >UniRef50_Q54L26 Putative uncharacterized protein n=1 Tax=Dictyostelium discoideum RepID=Q54L26_DICDI Length = 804 Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 80/552 (14%), Positives = 163/552 (29%), Gaps = 70/552 (12%) Query: 15 EIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE--------------- 59 + + G +V + + + + + + + ++ E Sbjct: 159 KKDLHTGMVVLATFEQVTEMDITISLPFGLKGYVKFNEISDSFTEWMKETLKREDENEKS 218 Query: 60 --------------LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDA 105 G + A+ + D L + + + Sbjct: 219 TNFRKMKIISDQVRKMFYKGQMLKCAIVGLTDHHTIEGLHCTLRPELVNVGSSIDTFSED 278 Query: 106 ETVTGVINGKVKGGFTVELNG--IRAFLPGSLV-----DVRPVRDTLHLEGKELEFKVIK 158 T+ G I G+ V FL S D G+ +E + Sbjct: 279 MTIHGCIESIQDKGYIVSFGSKDYNGFLEFSNTCYYYPDQSSDDQNQLYIGQPIESLIQS 338 Query: 159 LDQ--KRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGA---FVDLGG 213 +D+ K + +S V S +E+++ GM V+ V + G F+D Sbjct: 339 IDKSTKTFKLTISHPLVSRSTIKNSETITMESIKAGMLVETKVLRVLSNGLHLGFLDFFA 398 Query: 214 VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKR 273 D + + +P E + ++L D+ R+ L Sbjct: 399 GDIFILHSQ-------NPIETYKENQGVKARILFVDQVHKRIGLSTLGHVLGFKPYPFGT 451 Query: 274 YPEGTKLTG---RVTNLTDYGCFVEIEEGV------------EGLVHVSEM-DWTNKNIH 317 G + + + V E V G +H+ E+ N Sbjct: 452 TKPGQYVESGKLTIERIEPLEMIVTTESTVVQSNPMKAPLLLRGYIHIEELESGVNDLTK 511 Query: 318 PSKVVNVGDVVE--VMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSIT 375 S + +E V +D ++ + + + G V+G I+ + Sbjct: 512 ASNQFKKTEPLEKRCRVKHLDHLDGMVTYTARTRELEKKFYSYNDLSCGMVVQGVIRYVR 571 Query: 376 DFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQ 435 + + L I G+V ++ + + +K G + ++ V+ +++R+ L +K+ Sbjct: 572 ADSLEVELATSIHGVVARHHMADTNIT-DPLEFFKVGATVKVRIINVEPDKKRLQLTLKK 630 Query: 436 L---AEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDAT 492 +E P G I G +T V + G + A S ++E Sbjct: 631 SLIYSEYPIITDKNTTPIGTISHGIITKTTRFLVFVSFYNNSFGVVEAQNLSNSKIESVQ 690 Query: 493 LVLSVGDEVEAK 504 VG V AK Sbjct: 691 KQFPVGRTVLAK 702 Score = 138 bits (349), Expect = 4e-31, Method: Composition-based stats. Identities = 65/435 (14%), Positives = 142/435 (32%), Gaps = 44/435 (10%) Query: 147 LEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYG 206 +G+ L+ ++ L + ++ E M + G ++++ D G Sbjct: 236 YKGQMLKCAIVGLTDHHTIEGLHC---TLRPELVNVGSSIDTFSEDMTIHGCIESIQDKG 292 Query: 207 AFVDLGGVD--GLLHITDMAWKRVKHPSE---IVNVGDEITVKVLKFDRERTRVSLGL-- 259 V G D G L ++ + S+ + +G I + D+ L + Sbjct: 293 YIVSFGSKDYNGFLEFSNTCYYYPDQSSDDQNQLYIGQPIESLIQSIDKSTKTFKLTISH 352 Query: 260 ----KQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGC---FVEIEEGVEGLVHVSEMDWT 312 + ++ + G + +V + G F++ G ++H Sbjct: 353 PLVSRSTIKNSETITMESIKAGMLVETKVLRVLSNGLHLGFLDFFAGDIFILH------- 405 Query: 313 NKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEG--- 369 + +P + V+ +L +D+ +RI L T G VE Sbjct: 406 --SQNPIETYKENQGVKARILFVDQVHKRIGLSTLGHVLGFKPYPFGTTKPGQYVESGKL 463 Query: 370 KIKSITDFGIFIGLDGGI------------DGLVHLSDI-SWNVAGEEAVREYKKGDEIA 416 I+ I + + + + G +H+ ++ S +A ++KK + + Sbjct: 464 TIERIEPLEMIVTTESTVVQSNPMKAPLLLRGYIHIEELESGVNDLTKASNQFKKTEPLE 523 Query: 417 --AVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGV 474 V +D ++ + + G +V G + V A VELA + Sbjct: 524 KRCRVKHLDHLDGMVTYTARTRELEKKFYSYNDLSCGMVVQGVIRYVRADSLEVELATSI 583 Query: 475 EGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATV 534 G + + + D VG V+ + V+ + + L+++ E I Sbjct: 584 HGVVARHHMADTNITDPLEFFKVGATVKVRIINVEPDKKRLQLTLKKSLIYSEYPIITDK 643 Query: 535 NKQEDANFSNNAMAE 549 N S+ + + Sbjct: 644 NTTPIGTISHGIITK 658 Score = 126 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 60/450 (13%), Positives = 141/450 (31%), Gaps = 49/450 (10%) Query: 7 QLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLK-SESAIPAEQFKNAQGE------ 59 +L + G + +I +V G K + + Sbjct: 264 ELVNVGSSIDTFSEDMTIHGCIESIQDKGYIVSFGSKDYNGFLEFSNTCYYYPDQSSDDQ 323 Query: 60 LEIQVGDEVDVALDAVEDGFGETLLSREKA-----KRHEAWITLEKAYEDAETVTGVING 114 ++ +G ++ + +++ L+ + ++ + V + Sbjct: 324 NQLYIGQPIESLIQSIDKSTKTFKLTISHPLVSRSTIKNSETITMESIKAGMLVETKVLR 383 Query: 115 KVKGGF---TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRR 171 + G ++ F+ S P+ +G ++ +++ +DQ + +S Sbjct: 384 VLSNGLHLGFLDFFAGDIFILHSQ---NPIETYKENQG--VKARILFVDQVHKRIGLSTL 438 Query: 172 AVIESENSAERDQLLENLQEGMEVKG---IVKNLTDYGAFVDLGG-------------VD 215 + + + G V+ ++ + V + Sbjct: 439 GHV----LGFKPYPFGTTKPGQYVESGKLTIERIEPLEMIVTTESTVVQSNPMKAPLLLR 494 Query: 216 GLLHITDMAWK--RVKHPSEIVNVGDEIT--VKVLKFDRERTRVSLGLKQLGEDPWVAIA 271 G +HI ++ + S + + +V D V+ + + Sbjct: 495 GYIHIEELESGVNDLTKASNQFKKTEPLEKRCRVKHLDHLDGMVTYTARTRELEKKFYSY 554 Query: 272 KRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVM 331 G + G + + VE+ + G+V M TN P + VG V+V Sbjct: 555 NDLSCGMVVQGVIRYVRADSLEVELATSIHGVVARHHMADTN-ITDPLEFFKVGATVKVR 613 Query: 332 VLDIDEERRRISLGLKQCK---ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGID 388 +++++ +++R+ L LK+ P T G G I T F +F+ Sbjct: 614 IINVEPDKKRLQLTLKKSLIYSEYPIITDKNTTPIGTISHGIITKTTRFLVFVSFYNNSF 673 Query: 389 GLVHLSDISWNVAGEEAVREYKKGDEIAAV 418 G+V ++S N E +++ G + A Sbjct: 674 GVVEAQNLS-NSKIESVQKQFPVGRTVLAK 702 Score = 64.6 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 24/186 (12%), Positives = 60/186 (32%), Gaps = 8/186 (4%) Query: 7 QLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE---IQ 63 +L ++ + G +V+GV+ + D + V+ + + + Sbjct: 546 ELEKKFYSYNDLSCGMVVQGVIRYVRADSLEVELATSIHGVVARHHMADTNITDPLEFFK 605 Query: 64 VGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYED--AETVTGVINGKVKGGFT 121 VG V V + VE L+ +K+ + + + G+I + Sbjct: 606 VGATVKVRIINVEPDKKRLQLTLKKSLIYSEYPIITDKNTTPIGTISHGIITKTTRFLVF 665 Query: 122 VEL-NGIRAFLPGSLVDVRPVRDTLH--LEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 V N + + + G+ + K + + ++ + VI+ ++ Sbjct: 666 VSFYNNSFGVVEAQNLSNSKIESVQKQFPVGRTVLAKTLFSESSKSQPGLPLTLVIDDDD 725 Query: 179 SAERDQ 184 + Q Sbjct: 726 FNSQPQ 731 >UniRef50_C6JH83 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C6JH83_9FIRM Length = 302 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 88/279 (31%), Positives = 152/279 (54%), Gaps = 8/279 (2%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQG--- 58 + + E S K + G I+ G V+++D+ V+VD +E IPAE + G Sbjct: 5 MKDYETELEASFK--KIEEGDILTGTVISVDEKEVVVDLKYYAEGIIPAEDYSREPGFSL 62 Query: 59 ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 + ++ VGDEV + +DG G LLSR +A AW L++ + E + V+ G V G Sbjct: 63 KEQVNVGDEVSATVVRKDDGNGNILLSRTEAADVLAWDKLKELKDSKEVIDVVVKGIVNG 122 Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 G + G+R F+P S + + V DT K ++ +V +D+++ +++S + ++ + Sbjct: 123 GVIAYVEGVRGFIPASKLALNYVEDTNEYLNKPIQVQVFDIDKEKGRLILSAKEILREKA 182 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNV 237 ER + N+Q G+ +G+V++L YGAFVDLG G+ GL+HI+ + KR+K PSE++ V Sbjct: 183 EEERKTKISNVQVGLVTEGVVESLQPYGAFVDLGNGLSGLVHISQICEKRIKKPSEVLTV 242 Query: 238 GDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPE 276 GD++ VK + ++SL +K+ + I + E Sbjct: 243 GDKVKVK--VTAVKDGKLSLSIKEATDMMAKEIEEEVIE 279 Score = 151 bits (381), Expect = 8e-35, Method: Composition-based stats. Identities = 63/306 (20%), Positives = 131/306 (42%), Gaps = 14/306 (4%) Query: 258 GLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIH 317 +K + + K+ EG LTG V ++ + V+++ EG++ + Sbjct: 4 SMKDYETELEASF-KKIEEGDILTGTVISVDEKEVVVDLKYYAEGIIPAEDYSRE-PGFS 61 Query: 318 PSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHN-KGDRVEGKIKSITD 376 + VNVGD V V+ D+ I L + + + ++ +K I + Sbjct: 62 LKEQVNVGDEVSATVVRKDDGNGNILLSRTEAADVLAWDKLKELKDSKEVIDVVVKGIVN 121 Query: 377 FGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLG---- 432 G+ ++ G+ G + S ++ N + K I V +D E+ R+ L Sbjct: 122 GGVIAYVE-GVRGFIPASKLALNYVEDTNEYLNKP---IQVQVFDIDKEKGRLILSAKEI 177 Query: 433 VKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDAT 492 +++ AE+ ++ + G + G V ++ GA V+L +G+ G + S+ R++ + Sbjct: 178 LREKAEEERKTKISNVQVGLVTEGVVESLQPYGAFVDLGNGLSGLVHISQICEKRIKKPS 237 Query: 493 LVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDA-NFSNNAMAEAF 551 VL+VGD+V+ K+ +SLS++ + K+ V + D+ ++ ++ F Sbjct: 238 EVLTVGDKVKV--KVTAVKDGKLSLSIKEATDMMAKEIEEEVIELPDSKEEASTSLGALF 295 Query: 552 KAAKGE 557 K + Sbjct: 296 ANIKLD 301 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 57/285 (20%), Positives = 115/285 (40%), Gaps = 13/285 (4%) Query: 172 AVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKH 230 A + E + + ++EG + G V ++ + VDL +G++ D + + Sbjct: 2 AESMKDYETELEASFKKIEEGDILTGTVISVDEKEVVVDLKYYAEGIIPAEDYSREPGFS 61 Query: 231 PSEIVNVGDEITVKVLKFDRERTRVSLGL-KQLGEDPWVAIAKRYPEGTKLTGRVTNLTD 289 E VNVGDE++ V++ D + L + W + + + V + + Sbjct: 62 LKEQVNVGDEVSATVVRKDDGNGNILLSRTEAADVLAWDKLKELKDSKEVIDVVVKGIVN 121 Query: 290 YGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLG---- 345 G +E GV G + S++ ++ + ++V V DID+E+ R+ L Sbjct: 122 GGVIAYVE-GVRGFIPASKLALNY-VEDTNEYL--NKPIQVQVFDIDKEKGRLILSAKEI 177 Query: 346 LKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEA 405 L++ + G EG ++S+ +G F+ L G+ GLVH+S I ++ Sbjct: 178 LREKAEEERKTKISNVQVGLVTEGVVESLQPYGAFVDLGNGLSGLVHISQICEKRI-KKP 236 Query: 406 VREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKK 450 GD++ + ++SL +K+ + + Sbjct: 237 SEVLTVGDKVKVK--VTAVKDGKLSLSIKEATDMMAKEIEEEVIE 279 >UniRef50_C5RED5 RNA binding S1 domain protein n=1 Tax=Clostridium cellulovorans 743B RepID=C5RED5_CLOCL Length = 308 Score = 189 bits (479), Expect = 3e-46, Method: Composition-based stats. Identities = 82/285 (28%), Positives = 143/285 (50%), Gaps = 10/285 (3%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK---NAQG 58 + F + S+K G +V G VV++ ++ VLV G + IP E+ + Sbjct: 7 MKDFMDQIDNSMKR--IVKGQMVEGEVVSVTEEDVLVSIGHMKDGIIPKEKATFDMSKSL 64 Query: 59 ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 + + +GD + ++ +DG G+ LLS+ K R +W L++ + E + VKG Sbjct: 65 KEQFNLGDIIKAYVEVEDDGEGKILLSKVKLDRESSWDELQRLHNTQEIFEVTVKEAVKG 124 Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 G T EL G+RAF+P S + + V D K L+ K+I+L++ V++S + V E Sbjct: 125 GATTELYGVRAFIPASQLSMSYVEDISAFVNKVLKVKLIELNKDNRRVILSAKEVERDEL 184 Query: 179 SAERDQLLENL----QEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSE 233 S + D L E++ + G V+ V L +GA V L GV+GL+H + ++ RV +P + Sbjct: 185 SKKMDNLWESIDDKYRVGDIVETKVVKLLKFGAIVKLEEGVEGLVHNSQISDDRVMNPGD 244 Query: 234 IVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGT 278 + G +I VK+L D+ + ++SL K+ ++Y + Sbjct: 245 YLKEGQDIKVKILTIDKVQKKISLSYKEAVAKEQSTEFRKYAKNE 289 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 60/306 (19%), Positives = 121/306 (39%), Gaps = 16/306 (5%) Query: 258 GLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIH 317 +K + ++ + G + G V ++T+ V I +G++ E + + Sbjct: 6 SMKDFMDQIDNSMKRIVK-GQMVEGEVVSVTEEDVLVSIGHMKDGIIPK-EKATFDMSKS 63 Query: 318 PSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETH-NKGDRVEGKIKSITD 376 + N+GD+++ V D+ +I L + + N + E +K Sbjct: 64 LKEQFNLGDIIKAYVEVEDDGEGKILLSKVKLDRESSWDELQRLHNTQEIFEVTVKEAVK 123 Query: 377 FGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQL 436 G L G+ + S +S + + + K + +++++ + R+ L K++ Sbjct: 124 GGATTELY-GVRAFIPASQLSMSYVEDISAFVNKV---LKVKLIELNKDNRRVILSAKEV 179 Query: 437 AEDP--------FNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRV 488 D + + + G IV KV + GA V+L +GVEG + S+ S DRV Sbjct: 180 ERDELSKKMDNLWESIDDKYRVGDIVETKVVKLLKFGAIVKLEEGVEGLVHNSQISDDRV 239 Query: 489 EDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQED-ANFSNNAM 547 + L G +++ K +D+ + ISLS + ++ K ED + Sbjct: 240 MNPGDYLKEGQDIKVKILTIDKVQKKISLSYKEAVAKEQSTEFRKYAKNEDFGTTLGDMF 299 Query: 548 AEAFKA 553 + FK Sbjct: 300 GDKFKD 305 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 63/284 (22%), Positives = 120/284 (42%), Gaps = 15/284 (5%) Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNV 237 + D ++ + +G V+G V ++T+ V +G DG++ + K E N+ Sbjct: 11 MDQIDNSMKRIVKGQMVEGEVVSVTEEDVLVSIGHMKDGIIPKEKATFDMSKSLKEQFNL 70 Query: 238 GDEITVKVLKFDRERTRVSLG-LKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI 296 GD I V D ++ L +K E W + + + V G E+ Sbjct: 71 GDIIKAYVEVEDDGEGKILLSKVKLDRESSWDELQRLHNTQEIFEVTVKEAVKGGATTEL 130 Query: 297 EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP--- 353 GV + S++ + S V V++V +++++++ RR+ L K+ + + Sbjct: 131 Y-GVRAFIPASQLSMSY-VEDISAFV--NKVLKVKLIELNKDNRRVILSAKEVERDELSK 186 Query: 354 -----WQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVRE 408 W+ + + GD VE K+ + FG + L+ G++GLVH S IS + Sbjct: 187 KMDNLWESIDDKYRVGDIVETKVVKLLKFGAIVKLEEGVEGLVHNSQISDDRVM-NPGDY 245 Query: 409 YKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGA 452 K+G +I +L +D +++ISL K+ + K Sbjct: 246 LKEGQDIKVKILTIDKVQKKISLSYKEAVAKEQSTEFRKYAKNE 289 Score = 67.7 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 69/185 (37%), Gaps = 12/185 (6%) Query: 22 SIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQ-VGDEVDVALDAVEDGFG 80 I V K + + IPA Q + E V + V L + Sbjct: 112 EIFEVTVKEAVKGGATTEL-YGVRAFIPASQLSMSYVEDISAFVNKVLKVKLIELNKDNR 170 Query: 81 ETLLSREKAKRH-------EAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFLP 132 +LS ++ +R W +++ Y + V + +K G V+L G+ + Sbjct: 171 RVILSAKEVERDELSKKMDNLWESIDDKYRVGDIVETKVVKLLKFGAIVKLEEGVEGLVH 230 Query: 133 GSLVDVRPVRDTLHLE--GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQ 190 S + V + G++++ K++ +D+ + + +S + + E S E + +N Sbjct: 231 NSQISDDRVMNPGDYLKEGQDIKVKILTIDKVQKKISLSYKEAVAKEQSTEFRKYAKNED 290 Query: 191 EGMEV 195 G + Sbjct: 291 FGTTL 295 >UniRef50_UPI0001925B6E PREDICTED: similar to predicted protein, partial n=1 Tax=Hydra magnipapillata RepID=UPI0001925B6E Length = 375 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 57/344 (16%), Positives = 128/344 (37%), Gaps = 11/344 (3%) Query: 181 ERDQLLENLQEGMEVKGIV-KNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGD 239 ++ +L G V K + G + G D + + + ++ + Sbjct: 3 QKSAQFTSLMPGHLVDFKTEKKSENMGFGLIFGSFDAFVDKRHVPLDK----EIVLIEHE 58 Query: 240 EITVKVLKFDRERTRVSLGL-KQLGEDPWVAIAKRYPEGTKLTGRVTNL-TDYGCFVEIE 297 ++ +++ D ++ + L +L + P ++ + G L +V + G ++++ Sbjct: 59 KVEARIIHIDPNTKKIGVTLLPELIKFPKNILSNHHSVGEVLECQVVRSDSSSGLYMKMS 118 Query: 298 EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQF 357 E G VH+S+ N+ K +G + VL +L +K+ Sbjct: 119 ENTYGYVHISQ-TNDNRTTKLGKTFKIGTTHKCRVLGFSAMDSAYTLTMKKSILEKQFLS 177 Query: 358 AETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAA 417 E G + G I ++ DFG + + I L ++ + + +++ +G ++ Sbjct: 178 YEDLKPGMLISGTIVTLEDFGCIVKITDNIKALCPRLHLAD-INLKHPEKKFVEGKKLHF 236 Query: 418 VVLQVDAERERISLGVKQLAEDPFNNWVALN--KKGAIVTGKVTAVDAKGATVELADGVE 475 VL+ + + K+ + V+ G + G VTAV + G V + V+ Sbjct: 237 RVLRCKPSERSLVVTHKKTLVNSMFPIVSSYNVDVGTVAHGFVTAVKSFGVFVAFYNNVK 296 Query: 476 GYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSV 519 L SE+ + +G ++ VD + +S+ Sbjct: 297 ALLPKSESRLAQGATVETNFYIGQVLQCTVISVDSSAEKMVVSL 340 Score = 172 bits (435), Expect = 5e-41, Method: Composition-based stats. Identities = 58/331 (17%), Positives = 128/331 (38%), Gaps = 11/331 (3%) Query: 113 NGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRA 172 GF + AF+ V + + + +E +++E ++I +D + V+ Sbjct: 23 KKSENMGFGLIFGSFDAFVDKRHVPLDK--EIVLIEHEKVEARIIHIDPNTKKIGVT--- 77 Query: 173 VIESENSAERDQLLENLQEGMEVKG-IVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKH 230 ++ ++ L + G ++ +V++ + G ++ + G +HI+ R Sbjct: 78 LLPELIKFPKNILSNHHSVGEVLECQVVRSDSSSGLYMKMSENTYGYVHISQTNDNRTTK 137 Query: 231 PSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDY 290 + +G +VL F + +L +K+ + + G ++G + L D+ Sbjct: 138 LGKTFKIGTTHKCRVLGFSAMDSAYTLTMKKSILEKQFLSYEDLKPGMLISGTIVTLEDF 197 Query: 291 GCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCK 350 GC V+I + ++ L + N HP K G + VL R + + K+ Sbjct: 198 GCIVKITDNIKALCPRLHLADIN-LKHPEKKFVEGKKLHFRVLRCKPSERSLVVTHKKTL 256 Query: 351 ANPWQQFAETHN--KGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVRE 408 N ++N G G + ++ FG+F+ + L+ S+ S G Sbjct: 257 VNSMFPIVSSYNVDVGTVAHGFVTAVKSFGVFVAFYNNVKALLPKSE-SRLAQGATVETN 315 Query: 409 YKKGDEIAAVVLQVDAERERISLGVKQLAED 439 + G + V+ VD+ E++ + + Sbjct: 316 FYIGQVLQCTVISVDSSAEKMVVSLNFFTPP 346 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 37/264 (14%), Positives = 95/264 (35%), Gaps = 8/264 (3%) Query: 276 EGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDI 335 G + + ++ F I + V + + V+ + VE ++ I Sbjct: 13 PGHLVDFKTEKKSENMGFGLIFGSFDAFVDKRHVPLDKEI-----VLIEHEKVEARIIHI 67 Query: 336 DEERRRISLGLKQCKAN-PWQQFAETHNKGDRVEGKIKSI-TDFGIFIGLDGGIDGLVHL 393 D ++I + L P + H+ G+ +E ++ + G+++ + G VH+ Sbjct: 68 DPNTKKIGVTLLPELIKFPKNILSNHHSVGEVLECQVVRSDSSSGLYMKMSENTYGYVHI 127 Query: 394 SDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAI 453 S + N + + +K G VL A +L +K+ + K G + Sbjct: 128 SQTNDNRTTK-LGKTFKIGTTHKCRVLGFSAMDSAYTLTMKKSILEKQFLSYEDLKPGML 186 Query: 454 VTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNR 513 ++G + ++ G V++ D ++ + ++ G ++ + R Sbjct: 187 ISGTIVTLEDFGCIVKITDNIKALCPRLHLADINLKHPEKKFVEGKKLHFRVLRCKPSER 246 Query: 514 AISLSVRAKDEADEKDAIATVNKQ 537 ++ ++ + +++ N Sbjct: 247 SLVVTHKKTLVNSMFPIVSSYNVD 270 Score = 81.9 bits (201), Expect = 6e-14, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 65/169 (38%), Gaps = 7/169 (4%) Query: 8 LFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQGELEIQV 64 L ++ L + +PG ++ G +V ++ +V ++ P + E + Sbjct: 171 LEKQFLSYEDLKPGMLISGTIVTLEDFGCIVKITDNIKALCPRLHLADINLKHPEKKFVE 230 Query: 65 GDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETV-TGVINGKVKGGFTVE 123 G ++ + + +++ +K + + + D TV G + G V Sbjct: 231 GKKLHFRVLRCKPSERSLVVTHKKTLVNSMFPIVSSYNVDVGTVAHGFVTAVKSFGVFVA 290 Query: 124 L-NGIRAFLPGSLVDVRPVR--DTLHLEGKELEFKVIKLDQKRNNVVVS 169 N ++A LP S + +T G+ L+ VI +D +VVS Sbjct: 291 FYNNVKALLPKSESRLAQGATVETNFYIGQVLQCTVISVDSSAEKMVVS 339 Score = 78.1 bits (191), Expect = 9e-13, Method: Composition-based stats. Identities = 24/195 (12%), Positives = 74/195 (37%), Gaps = 7/195 (3%) Query: 357 FAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIA 416 + G V+ K + ++ F + G D V + + + +++ Sbjct: 7 QFTSLMPGHLVDFKTEKKSENMGFGLIFGSFDAFVDKRHVPLDKEI-----VLIEHEKVE 61 Query: 417 AVVLQVDAERERISLGV-KQLAEDPFNNWVALNKKGAIVTGKVTAV-DAKGATVELADGV 474 A ++ +D ++I + + +L + P N + G ++ +V + G +++++ Sbjct: 62 ARIIHIDPNTKKIGVTLLPELIKFPKNILSNHHSVGEVLECQVVRSDSSSGLYMKMSENT 121 Query: 475 EGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATV 534 GY+ S+ + +R +G + + G + A +L+++ + + + Sbjct: 122 YGYVHISQTNDNRTTKLGKTFKIGTTHKCRVLGFSAMDSAYTLTMKKSILEKQFLSYEDL 181 Query: 535 NKQEDANFSNNAMAE 549 + + + + Sbjct: 182 KPGMLISGTIVTLED 196 Score = 46.5 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 30/78 (38%), Gaps = 3/78 (3%) Query: 14 KEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQG---ELEIQVGDEVDV 70 G++ G V A+ V V ++ +P + + AQG E +G + Sbjct: 265 SSYNVDVGTVAHGFVTAVKSFGVFVAFYNNVKALLPKSESRLAQGATVETNFYIGQVLQC 324 Query: 71 ALDAVEDGFGETLLSREK 88 + +V+ + ++S Sbjct: 325 TVISVDSSAEKMVVSLNF 342 >UniRef50_A9UQD5 Predicted protein (Fragment) n=1 Tax=Monosiga brevicollis RepID=A9UQD5_MONBE Length = 1691 Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats. Identities = 83/604 (13%), Positives = 196/604 (32%), Gaps = 88/604 (14%) Query: 22 SIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA-QGELEIQVGDEVDVALDAVEDGFG 80 V+G V + +V ++ P + + + + G + V + +V + Sbjct: 997 EEVQGRVELVKVTHAVVSGPERTLLYCPTQTYNDRREPFKRFVAGSKATVTVLSVGNPEF 1056 Query: 81 ETL-----------------LSREKAKRHEAWITLEKAYEDA---------ETVTGVING 114 L E + V + Sbjct: 1057 VVGQATVQWASQRSQLALLPLYLHFCMLIVRDCFYGWKQESEPTTSELAVGQVVEAEVTK 1116 Query: 115 KVKGGFTVEL-NGIRAFLPGSLVDVRPVRDTLHLE----GKELEFKVIKLDQ-------- 161 + + L + + V + G +++ +++ Sbjct: 1117 AGQTQLQLRLPEKRSGRVLATEVLDENDTSAQPFKAYHKGDKIQVRILGFRDQKTRRFMP 1176 Query: 162 ------KRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGV 214 KR+ S + + + E ++ G E G+V + + +V L V Sbjct: 1177 ITQKFLKRHVAECSLKPSVLAAKELPPMLEREAVEVGQERWGVVSEVGERCLWVLLAPNV 1236 Query: 215 DGLLHITDM--AWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAK 272 G +++ ++ A K + +G ++ + + K L + ++ Sbjct: 1237 RGRINLVNLGAAATDPKALKKQFGIGMRHKFRI---------IIMSEKLLELELASESSQ 1287 Query: 273 RYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMV 332 G+ ++ + + + + + G G V ++++ + P K ++ V +V Sbjct: 1288 EIHVGSVVSASLKRIVNRFGIMHLGHGRFGAVDITDV-DDKLHAEPFKTLDRSKVYRAVV 1346 Query: 333 LD---------IDEERRRISLGLKQCKAN------PWQQFAETHNKGDRVEGKIKSITDF 377 + + I L L+ + E + G + + TD Sbjct: 1347 IGGENLAATGNMGSAIGDIRLSLRPSEVEGDAATKASVLRMEDVDTDQVHRGVVCNATDE 1406 Query: 378 GIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLA 437 G+F+ L + V ++++S + + +K G + ++ R+ + +K+ Sbjct: 1407 GVFVALSRNVTARVQIANLSDLFV-RDIKKAFKVGTLVQGRIMA--KTDGRLEMSLKKSD 1463 Query: 438 EDPFNN---WVALNKKGAIVTGKVTAVDAKGATVELAD--GVEGYLRASEASRDRVEDAT 492 DP + ++G VTG + V++ G + + D + G SE + R+ED Sbjct: 1464 VDPSGTTLLRIDTLEQGQHVTGVIKRVESYGVFIVIDDSANLTGMAHISECADQRIEDLN 1523 Query: 493 LVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADE------KDAIATVNKQEDANFSNNA 546 + S GD V+A VD + ISL ++ D ++ + + + + Sbjct: 1524 KLYSAGDAVKAVVLKVDVDKKRISLGIKPSYFDDAGLPQAMDESADEASAADGDASGDES 1583 Query: 547 MAEA 550 A+A Sbjct: 1584 DADA 1587 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 88/568 (15%), Positives = 180/568 (31%), Gaps = 71/568 (12%) Query: 6 AQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESA--IPAEQFKNAQG--ELE 61 A+L RPG VRG V + +++ +G S + +Q + E Sbjct: 315 AELSTNEAVMSTLRPGLQVRGKVQQVHAKGLVLQSGGFSIGIHHVHFDQLPTEKKTTEQL 374 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 VG + + ++ L S + TL + V F Sbjct: 375 YTVGQTLTARVIFIDLANKVILASLRQPHLQIDDCTLP--LPIGTRLPSCHVRFVDQAFG 432 Query: 122 VELNG------------------IRAFLPGSLVDVRPVR--DTLHLEGKELEFKVIKLDQ 161 V G + F S + V G E +V+ Sbjct: 433 VLAAGQPAPGHARGVPAEEDTPEVLGFAHISRLLEEHVETVPKSFRRGTAHEGRVVAQQP 492 Query: 162 KRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHI 220 ++ E+++ G+ V+G V +L G ++L G+ + Sbjct: 493 FDGIYSF----SFAPKDLKVPFLAAESIEVGLLVQGSVLSLIPSGMVIELASGIQARVPS 548 Query: 221 TDMAWKRVKHPSEIVNVGDEITVKVLKFDRERT---RVSLGLKQLG---EDPWVAIAKRY 274 +A + HP + GD++ +VL ++ + R+ + LK+ + P + Sbjct: 549 EHLADVMLTHPEKKFKAGDKVKGRVLSNEKLKGSKHRIKVTLKKTLVRSDLPIIKNMHDA 608 Query: 275 PEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLD 334 G + G ++ + D GC V +S + N + VVE VL+ Sbjct: 609 QPGMRTHGCISKVMDKGCIVSFYNQAR---RLSALPLFQNNAILANRGCKFMVVECGVLN 665 Query: 335 IDEERRRISLGLKQC-----KANPWQQFAETHNKGDRVEG----------KIKSITDFGI 379 D + + L + + G +K Sbjct: 666 CDPQENSLILTFRAAKTSVADRGARDAQLKRIEAGSLEAVEVVAVAEDMLTVK------- 718 Query: 380 FIGLDGGIDGLVHLSDISWNVAGEEAVRE-YKKGDEIAAVVLQVDAERERISLGVKQLAE 438 F+ + + ++ + + A+ YKKGD++ AVVL+ R+++ K + Sbjct: 719 FVE-SPLVQTELRAGHLTDHPSLATALCRTYKKGDKLEAVVLE--KRGRRVTISCKPQLK 775 Query: 439 DP-----FNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATL 493 + K G + + +V G + G+ G + + ++ V++ Sbjct: 776 AQTKVESLPKELDDLKLGQVFPAYIRSVLDYGCFIGTIHGLSGLVPLRQLAKRYVDNPKA 835 Query: 494 VLSVGDEVEAKFTGVDRKNRAISLSVRA 521 V + ++++ S++ Sbjct: 836 FFHPDQTVLVAVSEINKEQNRAVFSMKE 863 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 92/620 (14%), Positives = 178/620 (28%), Gaps = 112/620 (18%) Query: 9 FEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQG---------- 58 E L G ++ G V ++ V + + + Sbjct: 69 LVEPLTGKRIVVGQLLMGCVKSVADFAVQISLPHGLQGTLQLSDVSPHYVAYLRGKAADA 128 Query: 59 --------------------------------------ELEIQVGDEVDVALDAVEDGFG 80 VG ++ A+ A ED Sbjct: 129 EDAEAASASEDEESEQEQEQEQQANQSSQASDEIVVSMSRLFHVGQQLVCAVKAKEDKRL 188 Query: 81 ETLLSREKAKRHEAWITLEKAYEDAET-------------------------VTGVINGK 115 + + + ++T + + Sbjct: 189 LLTTDPRLIHANLDVDDILQKAHRSQTPQLLSLTLMDSRHWSPPCAHCQGRLLPACVQSV 248 Query: 116 VKGGFTVE--LNGIRAFLPGSLVDVRPVRDTLHLE-GKELEFKVIKLDQKRNNVV--VSR 170 G+ V+ ++G + FLP + + +L G+ L VV Sbjct: 249 EDHGYVVDLGIDGAQGFLPTKAAKLHVKQLGRNLVPGEPLFCVTTGTTAGSTRVVQVSIN 308 Query: 171 RAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKH 230 + + + + + ++ L+ G++V+G V+ + G + GG +H + Sbjct: 309 ISKLRTAELSTNEAVMSTLRPGLQVRGKVQQVHAKGLVLQSGGFSIGIHHVHFDQLPTEK 368 Query: 231 --PSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLT 288 ++ VG +T +V+ D + L+Q P GT+L Sbjct: 369 KTTEQLYTVGQTLTARVIFIDLANKVILASLRQPH-LQIDDCTLPLPIGTRLPSCHVRFV 427 Query: 289 D--YGCFV---------------EIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVM 331 D +G E V G H+S + K G E Sbjct: 428 DQAFGVLAAGQPAPGHARGVPAEEDTPEVLGFAHISRL-LEEHVETVPKSFRRGTAHEGR 486 Query: 332 VLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLV 391 V+ S AE+ G V+G + S+ G+ I L GI V Sbjct: 487 VVAQQPFDGIYSFSFAPKDLKVPFLAAESIEVGLLVQGSVLSLIPSGMVIELASGIQARV 546 Query: 392 HLSDISWNVAGEEAVREYKKGDEIAAVVLQVDA---ERERISLGVKQ---LAEDPFNNWV 445 ++ V +++K GD++ VL + + RI + +K+ ++ P + Sbjct: 547 PSEHLAD-VMLTHPEKKFKAGDKVKGRVLSNEKLKGSKHRIKVTLKKTLVRSDLPIIKNM 605 Query: 446 ALNKKGAIVTGKVTAVDAKGATVELADGVEGY--LRASEASRDRVEDATLVLSVGDEVEA 503 + G G ++ V KG V + L + + + + V VE Sbjct: 606 HDAQPGMRTHGCISKVMDKGCIVSFYNQARRLSALPLFQ-NNAILANRGCKFMV---VEC 661 Query: 504 KFTGVDRKNRAISLSVRAKD 523 D + ++ L+ RA Sbjct: 662 GVLNCDPQENSLILTFRAAK 681 Score = 152 bits (385), Expect = 3e-35, Method: Composition-based stats. Identities = 86/476 (18%), Positives = 162/476 (34%), Gaps = 65/476 (13%) Query: 10 EESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQ-----GELEIQV 64 E E G +V V + + + K + A + + Sbjct: 1096 ESEPTTSELAVGQVVEAEVTKAGQTQLQLRLPEKRSGRVLATEVLDENDTSAQPFKAYHK 1155 Query: 65 GDEVDVALDAVEDGFGETLLSREKAKRHEAWITL-----------------EKAYEDAET 107 GD++ V + D + + +A E + Sbjct: 1156 GDKIQVRILGFRDQKTRRFMPITQKFLKRHVAECSLKPSVLAAKELPPMLEREAVEVGQE 1215 Query: 108 VTGVINGKVKGGFTVELN-GIRAFLPGSLVD----VRPVRDTLHLEGKELEFKVIKLDQK 162 GV++ + V L +R + + G +F++I + +K Sbjct: 1216 RWGVVSEVGERCLWVLLAPNVRGRINLVNLGAAATDPKALKKQFGIGMRHKFRIIIMSEK 1275 Query: 163 RNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVD-GLLHIT 221 ++E E + + + + G V +K + + + LG G + IT Sbjct: 1276 ----------LLELELA---SESSQEIHVGSVVSASLKRIVNRFGIMHLGHGRFGAVDIT 1322 Query: 222 DMAWKRVKHPSEIVNVGDEITVKVLK---------FDRERTRVSLGLKQLGE------DP 266 D+ K P + ++ V+ + L L+ Sbjct: 1323 DVDDKLHAEPFKTLDRSKVYRAVVIGGENLAATGNMGSAIGDIRLSLRPSEVEGDAATKA 1382 Query: 267 WVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGD 326 V + G V N TD G FV + V V ++ + K VG Sbjct: 1383 SVLRMEDVDTDQVHRGVVCNATDEGVFVALSRNVTARVQIANLSD-LFVRDIKKAFKVGT 1441 Query: 327 VVEVMVLDIDEERRRISLGLKQCKANPWQQ---FAETHNKGDRVEGKIKSITDFGIFIGL 383 +V+ ++ + R+ + LK+ +P +T +G V G IK + +G+FI + Sbjct: 1442 LVQGRIMA--KTDGRLEMSLKKSDVDPSGTTLLRIDTLEQGQHVTGVIKRVESYGVFIVI 1499 Query: 384 DG--GIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLA 437 D + G+ H+S+ + E+ + Y GD + AVVL+VD +++RISLG+K Sbjct: 1500 DDSANLTGMAHISECADQRI-EDLNKLYSAGDAVKAVVLKVDVDKKRISLGIKPSY 1554 Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats. Identities = 92/558 (16%), Positives = 180/558 (32%), Gaps = 77/558 (13%) Query: 12 SLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQGELEIQVGDEV 68 L G +V+G V+++ ++++ ++ +P+E + E + + GD+V Sbjct: 510 FLAAESIEVGLLVQGSVLSLIPSGMVIELASGIQARVPSEHLADVMLTHPEKKFKAGDKV 569 Query: 69 DVALDAVEDGFG-----ETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVE 123 + + E G + L + + I + G I+ + G V Sbjct: 570 KGRVLSNEKLKGSKHRIKVTLKKTLVRSDLPIIKNMHDAQPGMRTHGCISKVMDKGCIVS 629 Query: 124 LNG----IRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 + A LP + +E V+ D + N+++++ RA S Sbjct: 630 FYNQARRLSA-LPLFQNNAILANRGCKFM--VVECGVLNCDPQENSLILTFRAAKTSVAD 686 Query: 180 A-ERDQLLENLQEGMEVKGIVKNLTDYGA---FVDLGGVDGLLHITDMAWKR--VKHPSE 233 RD L+ ++ G V + + FV+ V L + Sbjct: 687 RGARDAQLKRIEAGSLEAVEVVAVAEDMLTVKFVESPLVQTELRAGHLTDHPSLATALCR 746 Query: 234 IVNVGDEITVKVLKFDRERTRVSLGLK-----QLGEDPWVAIAKRYPEGTKLTGRVTNLT 288 GD++ VL+ + RV++ K Q + G + ++ Sbjct: 747 TYKKGDKLEAVVLE--KRGRRVTISCKPQLKAQTKVESLPKELDDLKLGQVFPAYIRSVL 804 Query: 289 DYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQ 348 DYGCF+ G+ GLV + ++ +P + V V V +I++E+ R +K+ Sbjct: 805 DYGCFIGTIHGLSGLVPLRQLA-KRYVDNPKAFFHPDQTVLVAVSEINKEQNRAVFSMKE 863 Query: 349 -----------------------CKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDG 385 + + A ++ G + I+ I FG+ Sbjct: 864 DVIGAVAVVPYMQSLAKDMARFAGIKDSPGRRAAPYHHGQAISVLIQEIKPFGVVGTTKD 923 Query: 386 GIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWV 445 G+ V E + G E+ VL +D E+ + + +K ++ Sbjct: 924 GVPIFVTKEQ--------RQGIECEVGVELPGRVLDIDYEKGVLDVTLKPELVSASSDNG 975 Query: 446 ALNKKG---------------AIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVED 490 +K G V G+V V A V + Y + R + Sbjct: 976 KDSKTGKGKRSHPTKLPFAKKEEVQGRVELVKVTHAVVSGPERTLLYCPTQTYNDRR--E 1033 Query: 491 ATLVLSVGDEVEAKFTGV 508 G + V Sbjct: 1034 PFKRFVAGSKATVTVLSV 1051 Score = 134 bits (338), Expect = 8e-30, Method: Composition-based stats. Identities = 90/558 (16%), Positives = 174/558 (31%), Gaps = 62/558 (11%) Query: 21 GSIVRGVVVAIDKDVVLVDAG-LKSESAIPAE--QFKNAQGELEIQVGDEVDVALDAVED 77 G ++ V +++ +VD G ++ +P + + Q + G+ + Sbjct: 238 GRLLPACVQSVEDHGYVVDLGIDGAQGFLPTKAAKLHVKQLGRNLVPGEPLFCVTTGTTA 297 Query: 78 GFGETL-----LSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLP 132 G + +S+ + + V G + G ++ G + Sbjct: 298 GSTRVVQVSINISKLRTAELSTNEAVMSTLRPGLQVRGKVQQVHAKGLVLQSGGFSIGIH 357 Query: 133 GSLVDVRPVRDTL----HLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLEN 188 D P + G+ L +VI +D ++ S R + Sbjct: 358 HVHFDQLPTEKKTTEQLYTVGQTLTARVIFIDLANKVILASLRQPHLQIDDCTLP----- 412 Query: 189 LQEGMEV-KGIVKNL-TDYGAFV----------------DLGGVDGLLHITDMAWKRVKH 230 L G + V+ + +G D V G HI+ + + V+ Sbjct: 413 LPIGTRLPSCHVRFVDQAFGVLAAGQPAPGHARGVPAEEDTPEVLGFAHISRLLEEHVET 472 Query: 231 PSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDY 290 + G +V+ S A+ G + G V +L Sbjct: 473 VPKSFRRGTAHEGRVVAQQPFDGIYSFSFAPKDLKVPFLAAESIEVGLLVQGSVLSLIPS 532 Query: 291 GCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDE---ERRRISLGLK 347 G +E+ G++ V + HP K GD V+ VL ++ + RI + LK Sbjct: 533 GMVIELASGIQARVPSEHLAD-VMLTHPEKKFKAGDKVKGRVLSNEKLKGSKHRIKVTLK 591 Query: 348 QCKAN---PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEE 404 + P + G R G I + D G + L L N Sbjct: 592 KTLVRSDLPIIKNMHDAQPGMRTHGCISKVMDKGCIVSFYNQARRLSALPLFQNNAILAN 651 Query: 405 AVREYKKGDEIAAVVLQVDAERERISLGVK-----QLAEDPFNNWVALNKKGAIVTGKVT 459 ++ + VL D + + L + + + + G++ +V Sbjct: 652 RGCKFMV---VECGVLNCDPQENSLILTFRAAKTSVADRGARDAQLKRIEAGSLEAVEVV 708 Query: 460 AVDAKGATVELADGVEGYLRASEASRDRVEDATLV-------LSVGDEVEAKFTGVDRKN 512 AV TV+ VE L +E + D + GD++EA ++ Sbjct: 709 AVAEDMLTVKF---VESPLVQTELRAGHLTDHPSLATALCRTYKKGDKLEAVVLE--KRG 763 Query: 513 RAISLSVRAKDEADEKDA 530 R +++S + + +A K Sbjct: 764 RRVTISCKPQLKAQTKVE 781 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 66/372 (17%), Positives = 133/372 (35%), Gaps = 38/372 (10%) Query: 6 AQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE-----L 60 A+ L+ G GVV + + + V I A + Sbjct: 1198 AKELPPMLEREAVEVGQERWGVVSEVGERCLWVLLAPNVRGRINLVNLGAAATDPKALKK 1257 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVING-KVKGG 119 + +G + + + E L+ E ++ V+ + + G Sbjct: 1258 QFGIGMRHKFRIIIMSEKLLELELASESSQEIH----------VGSVVSASLKRIVNRFG 1307 Query: 120 FTVELNGIRAFLPGSLVDVRPVRDTLHLE--GKELEFKVIKLDQ-----------KRNNV 166 +G + + VD + + K VI + + Sbjct: 1308 IMHLGHGRFGAVDITDVDDKLHAEPFKTLDRSKVYRAVVIGGENLAATGNMGSAIGDIRL 1367 Query: 167 VVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAW 225 + V + +E++ +G+V N TD G FV L V + I +++ Sbjct: 1368 SLRPSEVEGDAATKASVLRMEDVDTDQVHRGVVCNATDEGVFVALSRNVTARVQIANLSD 1427 Query: 226 KRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAI---AKRYPEGTKLTG 282 V+ + VG + +++ + R+ + LK+ DP +G +TG Sbjct: 1428 LFVRDIKKAFKVGTLVQGRIMA--KTDGRLEMSLKKSDVDPSGTTLLRIDTLEQGQHVTG 1485 Query: 283 RVTNLTDYGCFVEIEE--GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERR 340 + + YG F+ I++ + G+ H+SE + +K+ + GD V+ +VL +D +++ Sbjct: 1486 VIKRVESYGVFIVIDDSANLTGMAHISECAD-QRIEDLNKLYSAGDAVKAVVLKVDVDKK 1544 Query: 341 RISLGLKQCKAN 352 RISLG+K + Sbjct: 1545 RISLGIKPSYFD 1556 Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 57/283 (20%), Positives = 110/283 (38%), Gaps = 26/283 (9%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL 60 M+E +L S E GS+V + I ++ G A+ + Sbjct: 1272 MSEKLLELELASESSQEIHVGSVVSASLKRIVNRFGIMHLGHGRFGAVDITDVDDKLHAE 1331 Query: 61 EIQVGDEVDVA---LDAVED---------GFGETLLSREKAKRHEAWITL-----EKAYE 103 + D V + E+ G+ LS ++ T + + Sbjct: 1332 PFKTLDRSKVYRAVVIGGENLAATGNMGSAIGDIRLSLRPSEVEGDAATKASVLRMEDVD 1391 Query: 104 DAETVTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRPVRDTLH--LEGKELEFKVIKLD 160 + GV+ G V L+ + A + + + VRD G ++ +++ Sbjct: 1392 TDQVHRGVVCNATDEGVFVALSRNVTARVQIANLSDLFVRDIKKAFKVGTLVQGRIMAKT 1451 Query: 161 QKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG---GVDGL 217 R + + + V S + R LE G V G++K + YG F+ + + G+ Sbjct: 1452 DGRLEMSLKKSDVDPSGTTLLRIDTLEQ---GQHVTGVIKRVESYGVFIVIDDSANLTGM 1508 Query: 218 LHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLK 260 HI++ A +R++ +++ + GD + VLK D ++ R+SLG+K Sbjct: 1509 AHISECADQRIEDLNKLYSAGDAVKAVVLKVDVDKKRISLGIK 1551 Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 59/395 (14%), Positives = 127/395 (32%), Gaps = 35/395 (8%) Query: 189 LQEGMEVKGIVKNLTDYGAFVDLG--GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVL 246 +G + V+++ D+G VDLG G G L T A VK + G+ + Sbjct: 235 HCQGRLLPACVQSVEDHGYVVDLGIDGAQGFLP-TKAAKLHVKQLGRNLVPGEPLFCVTT 293 Query: 247 KFDR-ERTRVSLG-----LKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV 300 V + L+ A+ G ++ G+V + G ++ Sbjct: 294 GTTAGSTRVVQVSINISKLRTAELSTNEAVMSTLRPGLQVRGKVQQVHAKGLVLQSGGFS 353 Query: 301 EGL--VHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFA 358 G+ VH ++ K ++ VG + V+ ID + I L+Q Sbjct: 354 IGIHHVHFDQLPTEKKTT--EQLYTVGQTLTARVIFIDLANKVILASLRQPHL-QIDDCT 410 Query: 359 ETHNKGDRV-EGKIKSI-TDFGIFI---------------GLDGGIDGLVHLSDISWNVA 401 G R+ ++ + FG+ + G H+S + Sbjct: 411 LPLPIGTRLPSCHVRFVDQAFGVLAAGQPAPGHARGVPAEEDTPEVLGFAHISRLLEEHV 470 Query: 402 GEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAV 461 +++G V+ S + G +V G V ++ Sbjct: 471 ETVPKS-FRRGTAHEGRVVAQQPFDGIYSFSFAPKDLKVPFLAAESIEVGLLVQGSVLSL 529 Query: 462 DAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNR---AISLS 518 G +ELA G++ + + + + GD+V+ + ++ I ++ Sbjct: 530 IPSGMVIELASGIQARVPSEHLADVMLTHPEKKFKAGDKVKGRVLSNEKLKGSKHRIKVT 589 Query: 519 VRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKA 553 ++ + I ++ + ++ +++ Sbjct: 590 LKKTLVRSDLPIIKNMHDAQPGMRTHGCISKVMDK 624 >UniRef50_A8IBR0 RNA binding rRNA processing protein n=1 Tax=Chlamydomonas reinhardtii RepID=A8IBR0_CHLRE Length = 1280 Score = 185 bits (469), Expect = 5e-45, Method: Composition-based stats. Identities = 100/591 (16%), Positives = 182/591 (30%), Gaps = 105/591 (17%) Query: 17 ETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQGELEIQVGDEVDVALD 73 E G+++ G V + D V V Q + + G V + Sbjct: 367 EVSEGALLSGYVANVTGDAVYVRFLAGLTGRAGLPQLSDVFVSNPRELFAEGQSVRCLVA 426 Query: 74 AVEDGFGET-LLSREKAKRHEAWITLEKAYEDAETVTG-VINGKVKGGFTVELNGIR--A 129 V+ +L R A L + + + + G +L+G Sbjct: 427 TVDAARQRFTVLLRPSATASSDAAYLIDYFREMAALQVLRGDEVKDFGLVADLDGHPDVG 486 Query: 130 FLPGSL------------VDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESE 177 + SL +R G ++E V + ++ Sbjct: 487 LVELSLKPELTAAAKDAAASKEALRKLKP--GTQVEAVVEGIRPGEYLILSLPSHAHLLA 544 Query: 178 NSAERDQLLENLQE-----GMEVKGIVKNLTDYGAFVDLGGVDGL----LHITDMAWKRV 228 +A D V+ +V G G G+ L + +A R Sbjct: 545 YAAITDFNTPRPDAVPRKFTQVVEAVVLGRLQGGE----GHKRGVMDLSLRPSRLAIARK 600 Query: 229 KHPSE-----------------IVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIA 271 P ++ G + +VL + ++ + L L L Sbjct: 601 AEPQAPPVVLGDLVPGQQLTCFVLEPGAPVLARVLAVNAKKHTLDLSLAPL--------- 651 Query: 272 KRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVM 331 EG + GR+ + + G V + G V ++++ + G V V Sbjct: 652 --PAEGALVMGRILSASGAGVRVSLGPKRAGRVALTDI-HDAAVPDALAGLTEGTYVRVR 708 Query: 332 VLDIDEERRRISL--GLKQCKANPWQQFAET----------------------------- 360 VL D + +SL A Sbjct: 709 VLGKDGDFAVLSLRPSRGGAIAGAAGAAGAAAAAGGKKGKDAAAAKDQAAAAAPQPELLD 768 Query: 361 ---HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAA 417 GD + G +K G+F+ LD DG + L ++S E+ + G + A Sbjct: 769 VSGVKVGDSLGGYVKRCDAKGVFVALDRYRDGRIKLGNLSDGFI-EDPAAAFPPGCRLEA 827 Query: 418 VVLQVDAERERISLGVKQLAEDPFN----NWVALNKKGAIVTGKVTAVDAKGATVELADG 473 V+ ++A+ R+ L ++ + +A K+G +V+G+V V+ G VE+ Sbjct: 828 RVVALEAD-GRLELSLRTAPRSGSSGAAIQSLAELKEGQLVSGRVRRVEKFGVFVEVEGN 886 Query: 474 --VEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAK 522 V G SE + V+D + + V+A T +D +SLS++ Sbjct: 887 SSVVGLAHISELADGAVKDISALFKPKQAVKAVVTKIDAAANRLSLSMKPS 937 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 84/487 (17%), Positives = 161/487 (33%), Gaps = 90/487 (18%) Query: 30 AIDKDVVLVDAGLKSE-SAIPAE---QFKNAQGEL--------EIQVGDEVDVALDAVED 77 + ++ D + + + A + +++ G +V+ ++ + Sbjct: 469 EVKDFGLVADLDGHPDVGLVELSLKPELTAAAKDAAASKEALRKLKPGTQVEAVVEGIRP 528 Query: 78 GFGETLLSREKAKRHEAWITLEK---------AYEDAETVTGVINGKVKGGFTVELNGI- 127 G +LS A+ + + + V V+ G+++GG G Sbjct: 529 GE-YLILSLPSHAHLLAYAAITDFNTPRPDAVPRKFTQVVEAVVLGRLQGG-----EGHK 582 Query: 128 RAFL-----PGSLVDVRPVRDTLHLE-------GKELEFKVIKLDQKRNNVVVSRRAVIE 175 R + P L R G++L V++ V R + Sbjct: 583 RGVMDLSLRPSRLAIARKAEPQAPPVVLGDLVPGQQLTCFVLE-----PGAPVLARVLAV 637 Query: 176 SENSAERDQLLENLQ-EGMEVKGIVKNLTDYGAFVDLGGVD-GLLHITDMAWKRVKHPSE 233 + D L L EG V G + + + G V LG G + +TD+ V Sbjct: 638 NAKKHTLDLSLAPLPAEGALVMGRILSASGAGVRVSLGPKRAGRVALTDIHDAAVPDALA 697 Query: 234 IVNVGDEITVKVLKFDRERTRVSL--GLKQLGEDPWVAIAKR------------------ 273 + G + V+VL D + +SL A Sbjct: 698 GLTEGTYVRVRVLGKDGDFAVLSLRPSRGGAIAGAAGAAGAAAAAGGKKGKDAAAAKDQA 757 Query: 274 --------------YPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPS 319 G L G V G FV ++ +G + + + P+ Sbjct: 758 AAAAPQPELLDVSGVKVGDSLGGYVKRCDAKGVFVALDRYRDGRIKLGNLSDG-FIEDPA 816 Query: 320 KVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN----PWQQFAETHNKGDRVEGKIKSIT 375 G +E V+ + E R+ L L+ + Q +G V G+++ + Sbjct: 817 AAFPPGCRLEARVVAL-EADGRLELSLRTAPRSGSSGAAIQSLAELKEGQLVSGRVRRVE 875 Query: 376 DFGIFIGLDGG--IDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGV 433 FG+F+ ++G + GL H+S+++ ++ +K + AVV ++DA R+SL + Sbjct: 876 KFGVFVEVEGNSSVVGLAHISELADGAV-KDISALFKPKQAVKAVVTKIDAAANRLSLSM 934 Query: 434 KQLAEDP 440 K Sbjct: 935 KPSVLQQ 941 Score = 99.3 bits (246), Expect = 4e-19, Method: Composition-based stats. Identities = 89/515 (17%), Positives = 163/515 (31%), Gaps = 80/515 (15%) Query: 52 QFKNAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGV 111 + A + + G ++ + G ++ + + E V Sbjct: 246 EEAAADMTKKFKAGAKLPARVIGYRLMDGMATVTVRPS-------------QVGEKVEAR 292 Query: 112 INGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRR 171 + + L + A +PG V G + F + + + Sbjct: 293 VLEALLAPKAAPLASLEAAVPGGRYS-GLVTGFHDRLGVFVTF-FGGVVGAAAAAELGLQ 350 Query: 172 AVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVD-LGGVDGLLHITDMAWKRVKH 230 +++ Q + EG + G V N+T +V L G+ G + ++ V + Sbjct: 351 PGQTAQDVFSVGQAFGEVSEGALLSGYVANVTGDAVYVRFLAGLTGRAGLPQLSDVFVSN 410 Query: 231 PSEIVNVGDEITVKVLKFDRERTRVSLGLK--QLGEDPWVAIAKRYPEG---TKLTGRVT 285 P E+ G + V D R R ++ L+ + + E L G Sbjct: 411 PRELFAEGQSVRCLVATVDAARQRFTVLLRPSATASSDAAYLIDYFREMAALQVLRGD-- 468 Query: 286 NLTDYGCFVEIEEGVE-GLVHVS---EMDWTNKNIHPSKV----VNVGDVVEVMVLDIDE 337 + D+G +++ + GLV +S E+ K+ SK + G VE +V I Sbjct: 469 EVKDFGLVADLDGHPDVGLVELSLKPELTAAAKDAAASKEALRKLKPGTQVEAVVEGIRP 528 Query: 338 ERRRISLGLKQC----------KANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGI 387 + L L N + A VE + G +G Sbjct: 529 GEY-LILSLPSHAHLLAYAAITDFNTPRPDAVPRKFTQVVEAVVLGRLQGG-----EGHK 582 Query: 388 DGLVHLS------DISWNVAGEEAVR--------------EYKKGDEIAAVVLQVDAERE 427 G++ LS I+ + + G + A VL V+A++ Sbjct: 583 RGVMDLSLRPSRLAIARKAEPQAPPVVLGDLVPGQQLTCFVLEPGAPVLARVLAVNAKKH 642 Query: 428 RISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDR 487 + L + L +GA+V G++ + G V L G + ++ Sbjct: 643 TLDLSL-----------APLPAEGALVMGRILSASGAGVRVSLGPKRAGRVALTDIHDAA 691 Query: 488 VEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAK 522 V DA L+ G V + G D LS+R Sbjct: 692 VPDALAGLTEGTYVRVRVLGKDGD--FAVLSLRPS 724 Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 63/178 (35%), Gaps = 12/178 (6%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE---IQVGDE 67 E L + G + G V D V V + I + E G Sbjct: 765 ELLDVSGVKVGDSLGGYVKRCDAKGVFVALDRYRDGRIKLGNLSDGFIEDPAAAFPPGCR 824 Query: 68 VDVALDAVEDGFGETLLSREKAKRHEAWITLEKA---YEDAETVTGVINGKVKGGFTVEL 124 ++ + A+E G LS A R + ++ ++ + V+G + K G VE+ Sbjct: 825 LEARVVALE-ADGRLELSLRTAPRSGSSGAAIQSLAELKEGQLVSGRVRRVEKFGVFVEV 883 Query: 125 NG---IRAFLPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRAVIESE 177 G + S + V+D L + ++ V K+D N + +S + + + Sbjct: 884 EGNSSVVGLAHISELADGAVKDISALFKPKQAVKAVVTKIDAAANRLSLSMKPSVLQQ 941 Score = 61.9 bits (149), Expect = 6e-08, Method: Composition-based stats. Identities = 67/444 (15%), Positives = 130/444 (29%), Gaps = 101/444 (22%) Query: 160 DQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLL 218 D + ++ ++NL G ++ G+V +T G + L G+ G Sbjct: 89 DDEDAFFGRQAASLEGKMAKHVELLRVKNLSVGTKLWGMVLEVTPRGLVISLPHGLRG-- 146 Query: 219 HITDMAWKRVKHPSEIVNV------GDE------------------------ITVK---V 245 H+ + V+ + NV GD + V+ V Sbjct: 147 HVGGLLDVVVRSAGDKRNVLVGCGPGDVAGAVTKEADAITGLDCLLPGALLNVKVRKAEV 206 Query: 246 LKFDRERTRV---------------------SLGLKQLGEDPWVAIAKRYPEGTKLTGRV 284 ++ D +L K E+ + K++ G KL RV Sbjct: 207 MRVDAFAGPGLLLRLPGLPEGPAPAFCHVANALETKVKPEEAAADMTKKFKAGAKLPARV 266 Query: 285 T--NLTDYGCFV-----EIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDE 337 L D V ++ E VE V + + + + G +V Sbjct: 267 IGYRLMDGMATVTVRPSQVGEKVEARVLEALLAPKAAPLASLEAAVPGGRYSGLVTGF-H 325 Query: 338 ERRRISLGLKQCKANPWQQFAETHNKGDR-------------------VEGKIKSITDFG 378 +R + + G + G + ++T Sbjct: 326 DRLGVFVTFFGGVVGAAAAAELGLQPGQTAQDVFSVGQAFGEVSEGALLSGYVANVTGDA 385 Query: 379 IFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQ--- 435 +++ G+ G L +S + +G + +V VDA R+R ++ ++ Sbjct: 386 VYVRFLAGLTGRAGLPQLSDVFVS-NPRELFAEGQSVRCLVATVDAARQRFTVLLRPSAT 444 Query: 436 --LAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVE-GYLRAS---EASRDRVE 489 ++ ++ G V G +L + G + S E + + Sbjct: 445 ASSDAAYLIDYFREMAALQVLRG--DEVKDFGLVADLDGHPDVGLVELSLKPELTAAAKD 502 Query: 490 DATL-----VLSVGDEVEAKFTGV 508 A L G +VEA G+ Sbjct: 503 AAASKEALRKLKPGTQVEAVVEGI 526 >UniRef50_C7TYI6 Putative DnaJ (Hsp40) homolog, subfamily C, member 2 n=1 Tax=Schistosoma japonicum RepID=C7TYI6_SCHJA Length = 1870 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 95/591 (16%), Positives = 186/591 (31%), Gaps = 93/591 (15%) Query: 18 TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVED 77 PG+ + +V V++ + S+ I + + + Q+G V V + V+ Sbjct: 198 ILPGTCLNASIVKKVTSVLVAEF---SDYFISVPRSHYDGCKEDYQIGANVVVCIIFVDP 254 Query: 78 GFGET--LLSREKAKRHEAWITLEKAYEDAETVT----GVINGKVKGGFTVEL---NGIR 128 + L + + + + T ++ K V+L NG + Sbjct: 255 SAKQLTGSLLPHLVNPIPSILKISELLFRCPVGTRFSGSLVERVNKRAVLVKLPKTNGSK 314 Query: 129 AFLPGSLVDVRPVRDTLHL-EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLE 187 A + + + + L G +L ++I D N V A I + L Sbjct: 315 AVIRIHKTETKNNENFKSLAVGSKLTCRIIGHDFLENVAV----ATINKKLLTVPFLSLN 370 Query: 188 NLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVL 246 L+ G +V VK + G V + G + GL+ +K E G++++ VL Sbjct: 371 ELKPGYKVLATVKRYSKTGIVVHIEGRLHGLIPYLHTTDINLKEYKEKFKAGEKVSCIVL 430 Query: 247 KFDRERTRVSLGLKQLGEDPWVAI------AKRYPEGTK----LTGRVTNLTDYGCFVEI 296 + D ++ L K + + +G + G V +++ G + Sbjct: 431 QLDECANKLILTAKPGLVNSEFPVFGSREMYTALEKGNTDRLLVIGFVVKVSEKGLLISG 490 Query: 297 EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMV---LDIDEERR----------RIS 343 + V G + E +++I G V+++ ++I + + Sbjct: 491 LDNVRGWIPKRETGLADEDI-LQTNFYRGQVLKMKFKREINISPTNQMEGDNQSIRSKYM 549 Query: 344 LGLKQCKAN---PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGID-----------G 389 LK F ++ + G R + + D GI + L D G Sbjct: 550 FSLKFHSKKVKSSQSIFLDSVHIGQRFSATVNRVEDTGISVNLYATKDSNNTMTSVLGTG 609 Query: 390 LVHLSDISWNVAGEEAVREY----KKGDEIA-----AVVLQVDAERERISLGVKQL---- 436 + S +S + ++ + Y K G + V+ +D ++ + + + Sbjct: 610 FLSFSQLSDYESNQQLLCRYTKNMKSGSTLDWNNSAREVVVIDKGKQTVIVSARPTLIWA 669 Query: 437 ---------------------AEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVE 475 F + G V+ G V G+ Sbjct: 670 AGNPKIDASNDVNMVDLQTSTTMPGFLRTFDELQIGGQWFAWVSHHKDYGVFVRFPAGIY 729 Query: 476 GYLRASEASRDR---VEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKD 523 G S R + + VG V AK V + R S+R D Sbjct: 730 GLAPKHLLSDFRAPSNTNWAELFPVGATVIAKIVEVTPEKRHCLASLRMLD 780 Score = 148 bits (374), Expect = 5e-34, Method: Composition-based stats. Identities = 89/563 (15%), Positives = 179/563 (31%), Gaps = 75/563 (13%) Query: 26 GVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE-------------------IQVGD 66 GVV +I K + + + + EL +VG Sbjct: 9 GVVKSIHKLYLEIQLPHGFLGRVNIYDISDKYTELLRESAETGVIHDDLVELSEMFKVGQ 68 Query: 67 EVDVALDAVEDGFG-----ETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFT 121 V + ++ G L+S +++ + K + G I G+ Sbjct: 69 IVRCFIKESDNSRGGGSNKRYLVSLNPKMVNKSV--ISKNLKPYMVFVGSIVSNEDHGYI 126 Query: 122 VE--LNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 V+ + + FLP VD P G + F D S R + Sbjct: 127 VDSGVPRMSCFLPKDQVDDNPN------IGSLIAFTPYVSDPSNFVSSTSDRVSKVTTRL 180 Query: 180 AERDQLLEN--------LQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHP 231 +L++ + G + + + + + Sbjct: 181 DPTLSVLKSNSRVNFDCILPGTCLNASIVKKVTSVLVAEFSDYFISVPRSHY-----DGC 235 Query: 232 SEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAK------RYPEGTKLTGR-V 284 E +G + V ++ D +++ L +P +I K R P GT+ +G V Sbjct: 236 KEDYQIGANVVVCIIFVDPSAKQLTGSLLPHLVNPIPSILKISELLFRCPVGTRFSGSLV 295 Query: 285 TNLTDYGCFVEIE--EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRI 342 + V++ G + ++ + T N + K + VG + ++ D Sbjct: 296 ERVNKRAVLVKLPKTNGSKAVIRI-HKTETKNNENF-KSLAVGSKLTCRIIGHDFLENVA 353 Query: 343 SLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAG 402 + + G +V +K + GI + ++G + GL+ + ++ Sbjct: 354 VATINKKLLTVPFLSLNELKPGYKVLATVKRYSKTGIVVHIEGRLHGLIPYLH-TTDINL 412 Query: 403 EEAVREYKKGDEIAAVVLQVDAERERISLGVKQ------LAEDPFNNWVALNKKGA---- 452 +E ++K G++++ +VLQ+D ++ L K +KG Sbjct: 413 KEYKEKFKAGEKVSCIVLQLDECANKLILTAKPGLVNSEFPVFGSREMYTALEKGNTDRL 472 Query: 453 IVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKN 512 +V G V V KG + D V G++ E + G ++ K Sbjct: 473 LVIGFVVKVSEKGLLISGLDNVRGWIPKRETGLADEDILQTNFYRGQVLKMK------FK 526 Query: 513 RAISLSVRAKDEADEKDAIATVN 535 R I++S + E D + + Sbjct: 527 REINISPTNQMEGDNQSIRSKYM 549 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 85/585 (14%), Positives = 186/585 (31%), Gaps = 86/585 (14%) Query: 7 QLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGL-KSESAIPAEQFKNAQGELEIQVG 65 ++ +S+ +P + G +V+ + +VD+G+ + +P +Q + +G Sbjct: 96 KMVNKSVISKNLKPYMVFVGSIVSNEDHGYIVDSGVPRMSCFLPKDQV-----DDNPNIG 150 Query: 66 DEVDV---------ALDAVEDGFGETL--LSREKAKRHEAWITLEKAYEDAETVTGVING 114 + + + D + L + + I Sbjct: 151 SLIAFTPYVSDPSNFVSSTSDRVSKVTTRLDPTLSVLKSNSRVNFDCILPGTCLNASIVK 210 Query: 115 KVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQ--KRNNVVVSRRA 172 KV E + +P S D + G + +I +D K+ + Sbjct: 211 KVTSVLVAEFSDYFISVPRSHYD---GCKEDYQIGANVVVCIIFVDPSAKQLTGSLLPHL 267 Query: 173 VIESENSAERDQLLENLQEGMEVKG-IVKNLTDYGAFVDLGGVDG-----LLHITDMAWK 226 V + + +LL G G +V+ + V L +G +H T+ Sbjct: 268 VNPIPSILKISELLFRCPVGTRFSGSLVERVNKRAVLVKLPKTNGSKAVIRIHKTE---T 324 Query: 227 RVKHPSEIVNVGDEITVKVLKFDRERTRVSLGL-KQLGEDPWVAIAKRYPEGTKLTGRVT 285 + + + VG ++T +++ D + K+L P++++ G K+ V Sbjct: 325 KNNENFKSLAVGSKLTCRIIGHDFLENVAVATINKKLLTVPFLSL-NELKPGYKVLATVK 383 Query: 286 NLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLG 345 + G V IE + GL+ N + G+ V +VL +DE ++ L Sbjct: 384 RYSKTGIVVHIEGRLHGLIPYLHTTDIN-LKEYKEKFKAGEKVSCIVLQLDECANKLILT 442 Query: 346 LKQCKANPWQQ------FAETHNKGDR----VEGKIKSITDFGIFIGLDGGIDGLVHLSD 395 K N KG+ V G + +++ G+ I + G + + Sbjct: 443 AKPGLVNSEFPVFGSREMYTALEKGNTDRLLVIGFVVKVSEKGLLISGLDNVRGWIPKRE 502 Query: 396 --ISWNVAGEEAVREYKKGDEIAAVV---LQVDAERE----------RISLGVKQ---LA 437 ++ + +G + + + + + +K Sbjct: 503 TGLADEDI---LQTNFYRGQVLKMKFKREINISPTNQMEGDNQSIRSKYMFSLKFHSKKV 559 Query: 438 EDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVE-----------GYLRASEASRD 486 + + ++ G + V V+ G +V L + G+L S+ S Sbjct: 560 KSSQSIFLDSVHIGQRFSATVNRVEDTGISVNLYATKDSNNTMTSVLGTGFLSFSQLSDY 619 Query: 487 RVE-----DATLVLSVGDEV----EAK-FTGVDRKNRAISLSVRA 521 T + G + A+ +D+ + + +S R Sbjct: 620 ESNQQLLCRYTKNMKSGSTLDWNNSAREVVVIDKGKQTVIVSARP 664 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 75/591 (12%), Positives = 164/591 (27%), Gaps = 131/591 (22%) Query: 12 SLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL---EIQVGDEV 68 L E +PG V V K ++V + IP + + + + G++V Sbjct: 366 FLSLNELKPGYKVLATVKRYSKTGIVVHIEGRLHGLIPYLHTTDINLKEYKEKFKAGEKV 425 Query: 69 DVALDAVEDGFGETLLS---------REKAKRHEAWITLEKAYEDAETVTGVINGKVKGG 119 + +++ + +L+ E + LEK D V G + + G Sbjct: 426 SCIVLQLDECANKLILTAKPGLVNSEFPVFGSREMYTALEKGNTDRLLVIGFVVKVSEKG 485 Query: 120 FTVE-LNGIRAFLPGSL--VDVRPVRDTLHLEGKELEFKVI-KLDQKRNNVVVSRRAVIE 175 + L+ +R ++P + + T G+ L+ K +++ N + I Sbjct: 486 LLISGLDNVRGWIPKRETGLADEDILQTNFYRGQVLKMKFKREINISPTNQMEGDNQSIR 545 Query: 176 SENSAERDQ-----------LLENLQEGMEVKGIVKNLTDYGAFVDLGGV---------- 214 S+ L+++ G V + D G V+L Sbjct: 546 SKYMFSLKFHSKKVKSSQSIFLDSVHIGQRFSATVNRVEDTGISVNLYATKDSNNTMTSV 605 Query: 215 --DGLLHITDMAWKRVKHPSEIVNVGDEITVK-------------------VLKFDRERT 253 G L + ++ ++ + V+ D+ + Sbjct: 606 LGTGFLSFSQLSD---------YESNQQLLCRYTKNMKSGSTLDWNNSAREVVVIDKGKQ 656 Query: 254 RVSLGLKQLGEDPWVAIA-------------------------KRYPEGTKLTGRVTNLT 288 V + + G + V++ Sbjct: 657 TVIVSARPTLIWAAGNPKIDASNDVNMVDLQTSTTMPGFLRTFDELQIGGQWFAWVSHHK 716 Query: 289 DYGCFVEIEEGVEGLVHVSEMDWTNKNIHPS--KVVNVGDVVEVMVLDIDEERRRISLGL 346 DYG FV G+ GL + + + ++ VG V ++++ E+R L Sbjct: 717 DYGVFVRFPAGIYGLAPKHLLSDFRAPSNTNWAELFPVGATVIAKIVEVTPEKRHCLASL 776 Query: 347 KQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAV 406 + + +N G ++ +L++ W E + Sbjct: 777 R---------MLDMYNAKQHYVGMAIHSLNY--------------YLTEREWISQKHELL 813 Query: 407 REYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAV----- 461 ++ GD + V ++ + G+ + Sbjct: 814 GSFRIGDRVHFKVESLE---NSVIFGMACRQPVKNAAKQLTWVPAMAYVANSVNIDCIVS 870 Query: 462 DAKGATVELADGVEGYLRASEASR------DRVEDATLVLSVGDEVEAKFT 506 A V D + L +S R + + +L ++ + Sbjct: 871 QTYSAIVCFVDHEQSRLEIVLSSWLVNGILTRKNNVSSLLKTNQQISSVVL 921 >UniRef50_Q46GP7 SSU ribosomal protein S1P n=24 Tax=cellular organisms RepID=Q46GP7_PROMT Length = 431 Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats. Identities = 58/259 (22%), Positives = 113/259 (43%), Gaps = 12/259 (4%) Query: 21 GSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA---QGELEIQVGDEVDVALDAVED 77 G I +G V+A++ D + VD G K+ +P + + G +V+V + ++ Sbjct: 149 GEIAKGSVIAVESDGIYVDIGGKAPGFMPKNECGLGVITNLKERFPKGLKVEVLVTREQN 208 Query: 78 GFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVD 137 G +S + ++W ++ ++ + + ING +GG T + G+R F+P S ++ Sbjct: 209 ADGMVTISCRALELRKSWDKVQNLAKEGKVIRVKINGFNRGGVTCDFEGLRGFIPRSQLE 268 Query: 138 VRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKG 197 + L K + ++++ +R +V+S + + L+ G ++G Sbjct: 269 DG--ENHQSLVSKTISTAFLEVNPERRKLVLSEKKAAIASR-------FSELEIGQLIEG 319 Query: 198 IVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSL 257 + + YG FVDL GV GLLH + + ++ E+ G+ I + D R R+ L Sbjct: 320 EILTIKPYGFFVDLRGVSGLLHHSMVTNGSMRSLREVFQPGESIKALITDLDPSRGRIGL 379 Query: 258 GLKQLGEDPWVAIAKRYPE 276 L P I + Sbjct: 380 NTALLEGPPGELITDKTKV 398 Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats. Identities = 48/282 (17%), Positives = 97/282 (34%), Gaps = 12/282 (4%) Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDID 336 G G V + G +V+I G + +E + + G VEV+V Sbjct: 149 GEIAKGSVIAVESDGIYVDIGGKAPGFMPKNECGLG-VITNLKERFPKGLKVEVLVTREQ 207 Query: 337 EERRRISLGLKQCKANPWQQFAETH-NKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSD 395 +++ + + + +G + KI G+ + G+ G + S Sbjct: 208 NADGMVTISCRALELRKSWDKVQNLAKEGKVIRVKINGFNRGGVTCDFE-GLRGFIPRSQ 266 Query: 396 ISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVT 455 + + I+ L+V+ ER ++ L K + + + + G ++ Sbjct: 267 LEDGENHQSL-----VSKTISTAFLEVNPERRKLVLSEK---KAAIASRFSELEIGQLIE 318 Query: 456 GKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAI 515 G++ + G V+L GV G L S + + V G+ ++A T +D I Sbjct: 319 GEILTIKPYGFFVDLR-GVSGLLHHSMVTNGSMRSLREVFQPGESIKALITDLDPSRGRI 377 Query: 516 SLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAAKGE 557 L+ + + E+AN + K + Sbjct: 378 GLNTALLEGPPGELITDKTKVMEEANERAIKARNSLNKEKVD 419 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 56/261 (21%), Positives = 102/261 (39%), Gaps = 13/261 (4%) Query: 192 GMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDR 250 G KG V + G +VD+GG G + + + + E G ++ V V + Sbjct: 149 GEIAKGSVIAVESDGIYVDIGGKAPGFMPKNECGLGVITNLKERFPKGLKVEVLVTREQN 208 Query: 251 ERTRVSLGLKQLG-EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEM 309 V++ + L W + EG + ++ G + E G+ G + S++ Sbjct: 209 ADGMVTISCRALELRKSWDKVQNLAKEGKVIRVKINGFNRGGVTCDFE-GLRGFIPRSQL 267 Query: 310 DWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEG 369 + + V + L+++ ERR++ L K+ G +EG Sbjct: 268 EDGENHQSL-----VSKTISTAFLEVNPERRKLVLSEKKA---AIASRFSELEIGQLIEG 319 Query: 370 KIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERI 429 +I +I +G F+ L G+ GL+H S + N + ++ G+ I A++ +D R RI Sbjct: 320 EILTIKPYGFFVDL-RGVSGLLHHS-MVTNGSMRSLREVFQPGESIKALITDLDPSRGRI 377 Query: 430 SLGVKQLAEDPFNNWVALNKK 450 L L P K Sbjct: 378 GLNTALLEGPPGELITDKTKV 398 >UniRef50_B0XAB3 Programmed cell death protein 11 n=1 Tax=Culex quinquefasciatus RepID=B0XAB3_CULQU Length = 1481 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 87/539 (16%), Positives = 173/539 (32%), Gaps = 49/539 (9%) Query: 13 LKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQG-------------- 58 L+ + G +V G V + K +LV + +P A G Sbjct: 74 LQFKTAQEGMLVLGCVYKVQKLELLVSLPGRLFGRVPVTAISGAYGKRLQSVVEGGEGGC 133 Query: 59 ----ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVING 114 E VG+ V V + + LS + + H K + ++ + Sbjct: 134 CPGLEELYSVGELVYVKIKGKDQERWRFELSLDPKELHSELN--HKHLVEGLVISATVEE 191 Query: 115 KVKGGF--TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLD--QKRNNVVVSR 170 + G+ V + +RAFLP + VR+ G + V K+ V++ Sbjct: 192 EEDHGYQMNVGIRNVRAFLP-----TKNVRNNRMEVGGNVHCTVEKVTLANGTATVILKA 246 Query: 171 RAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKH 230 E +++L G V V+++ G L + + ++ Sbjct: 247 FKPKELRKLDVAAANIDSLMPGSVVTFTVESILPNGLQGTLFDDTVPAFVNENMLEKPLS 306 Query: 231 PSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKL-TGRVT-NLT 288 + ++ ++L V L L +G+ ++A P GT L +V + Sbjct: 307 KVASFELFKQVPARILYVMPMTKHVFLTL-AIGDSNRYSVADPLPVGTVLKDAKVMHKCS 365 Query: 289 DYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVV----NVGDVVEVMVLDIDEERRRISL 344 G + ++ + + L+ + + ++V +G + V V+ + R + + Sbjct: 366 TGGVWFQLGKKHKALLPRYVLKSRYNANYDEQIVMAKYQIGSLHTVRVIRYEAFDRTLII 425 Query: 345 GLKQCKANPWQQFAETHNKGDRVEGKIKSITDF--GIFIGLDGG-IDGLVHLSDISWNVA 401 + GD E ++ I D G+ + L GG + G+V +S N Sbjct: 426 TDDDATIGSRFFSLDDLRVGDVYECRVTRILDDKRGLAVTLAGGRVKGIV----MSHNYR 481 Query: 402 GEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNN---WVALNKKGAIVTGKV 458 ++Y I ++ +D ++++ A K G V Sbjct: 482 F---TKQYAPKQSIKMRLIGIDEDKQQALFTNHPEYLRKSAKLILDRAAIKPDQKCLGTV 538 Query: 459 TAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISL 517 + K V + + L S + + L G V I+L Sbjct: 539 ISETEKFFIVAFCNKITAILFKFCRSVTQDSERIDRLKPGSVELFTVHEVTEDGAKITL 597 Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats. Identities = 77/523 (14%), Positives = 169/523 (32%), Gaps = 50/523 (9%) Query: 7 QLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLK-SESAIPAEQFKNAQGELEIQVG 65 + L G ++ V + ++ G++ + +P + +N + E VG Sbjct: 168 KELHSELNHKHLVEGLVISATVEEEEDHGYQMNVGIRNVRAFLPTKNVRNNRME----VG 223 Query: 66 DEVDVALDAVEDGFGETLLSREKAKRHEAWI-----TLEKAYEDAETVTGVINGKVKGGF 120 V ++ V G + + K E + VT + + G Sbjct: 224 GNVHCTVEKVTLANGTATVILKAFKPKELRKLDVAAANIDSLMPGSVVTFTVESILPNGL 283 Query: 121 TVEL--NGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 L + + AF+ ++++ + K++ +++ + +V ++ + Sbjct: 284 QGTLFDDTVPAFVNENMLEKPLSKVASFELFKQVPARILYVMPMTKHVFLTL-----AIG 338 Query: 179 SAERDQLLENLQEGMEV-KGIV-KNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSE-- 233 + R + + L G + V + G + LG LL + + + E Sbjct: 339 DSNRYSVADPLPVGTVLKDAKVMHKCSTGGVWFQLGKKHKALLPRYVLKSRYNANYDEQI 398 Query: 234 ---IVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTD- 289 +G TV+V++++ + + G RVT + D Sbjct: 399 VMAKYQIGSLHTVRVIRYEAFDRTLIITDDDATIGSRFFSLDDLRVGDVYECRVTRILDD 458 Query: 290 -YGCFVEIEEG-VEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLK 347 G V + G V+G+V M + +K +++ ++ IDE++++ Sbjct: 459 KRGLAVTLAGGRVKGIV----MSHNYRF---TKQYAPKQSIKMRLIGIDEDKQQALFTNH 511 Query: 348 QCKANPWQQ---FAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEE 404 + + G + S T+ + I ++ S E Sbjct: 512 PEYLRKSAKLILDRAAIKPDQKCLGTVISETEKFFIVAFCNKITAILFKFCRSVTQDSER 571 Query: 405 AVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAK 464 K G V +V + +I+L + PF G + T +T + A Sbjct: 572 I-DRLKPGSVELFTVHEVTEDGAKITLIL------PFATGGDNL--GHVSTATITGIFAT 622 Query: 465 GATVEL-ADGVEGYLRASEASR--DRVEDATLVLSVGDEVEAK 504 G V L + G + S + L G++++ Sbjct: 623 GVDVYLVKENETGTVPPEALSDFPEHNALVQSTLREGEKLKVV 665 Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 62/437 (14%), Positives = 133/437 (30%), Gaps = 42/437 (9%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVD-AGLKSESAIPAEQFKNAQGELE 61 + +L + PGS+V V +I + + + + + ++ Sbjct: 250 KELRKLDVAAANIDSLMPGSVVTFTVESILPNGLQGTLFDDTVPAFVNENMLEKPLSKVA 309 Query: 62 -IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVT-GVINGKVK-G 118 ++ +V + V L+ A ++ + + K G Sbjct: 310 SFELFKQVPARILYVMPMTKHVFLTL--AIGDSNRYSVADPLPVGTVLKDAKVMHKCSTG 367 Query: 119 GFTVELN-GIRAFLPGSLVDVRPVRDTLH-------LEGKELEFKVIKLDQKRNNVVVSR 170 G +L +A LP ++ R + G +VI+ + ++++ Sbjct: 368 GVWFQLGKKHKALLPRYVLKSRYNANYDEQIVMAKYQIGSLHTVRVIRYEAFDRTLIITD 427 Query: 171 RAVIESENSAERDQLLENLQEGMEVKGIVKNLTDY--GAFVDLGG--VDGLLHITDMAWK 226 L++L+ G + V + D G V L G V G++ M+ Sbjct: 428 DDATIGSRF----FSLDDLRVGDVYECRVTRILDDKRGLAVTLAGGRVKGIV----MSHN 479 Query: 227 RVKHPSEIVNVGDEITVKVLKFDRERTRVSLG-LKQLGEDPWVAIAKR--YPEGTKLTGR 283 ++ I ++++ D ++ + + I R K G Sbjct: 480 Y--RFTKQYAPKQSIKMRLIGIDEDKQQALFTNHPEYLRKSAKLILDRAAIKPDQKCLGT 537 Query: 284 VTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRIS 343 V + T+ V + ++ T + + G V V ++ E+ +I+ Sbjct: 538 VISETEKFFIVAFCNKITAILFKFCRSVTQDSERI-DRLKPGSVELFTVHEVTEDGAKIT 596 Query: 344 LGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGL-DGGIDGLVHLSDISWNVAG 402 L L N G I I G+ + L G V +S Sbjct: 597 LILPFATGGD--------NLGHVSTATITGIFATGVDVYLVKENETGTVPPEALSDFPEH 648 Query: 403 EEA-VREYKKGDEIAAV 418 ++G+++ V Sbjct: 649 NALVQSTLREGEKLKVV 665 Score = 66.1 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 74/588 (12%), Positives = 172/588 (29%), Gaps = 80/588 (13%) Query: 10 EESLKEIETRPGSIVR-GVVV-AIDKDVVLVDAGLKSESAIPAEQFKNAQGEL------- 60 G++++ V+ V G K ++ +P K+ Sbjct: 341 NRYSVADPLPVGTVLKDAKVMHKCSTGGVWFQLGKKHKALLPRYVLKSRYNANYDEQIVM 400 Query: 61 -EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKV--K 117 + Q+G V + E +++ + A + +L+ + + + K Sbjct: 401 AKYQIGSLHTVRVIRYEAFDRTLIITDDDATIGSRFFSLDD-LRVGDVYECRVTRILDDK 459 Query: 118 GGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESE 177 G V L G + G ++ + + ++ ++I +D+ + + + + Sbjct: 460 RGLAVTLAG--GRVKGIVMSHNYRFTKQYAPKQSIKMRLIGIDEDKQQALFTNHPEYLRK 517 Query: 178 NSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVN 236 ++ ++ + G V + T+ V + +L + + + + Sbjct: 518 SAKLILDR-AAIKPDQKCLGTVISETEKFFIVAFCNKITAILFKFCRSVTQDSERIDRLK 576 Query: 237 VGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI 296 G V + + +++L L G T +T + G V + Sbjct: 577 PGSVELFTVHEVTEDGAKITLIL--------PFATGGDNLGHVSTATITGIFATGVDVYL 628 Query: 297 -EEGVEGLVHVSEMDWTNK-NIHPSKVVNVGDVVEVM-----------VLDIDEERRRI- 342 +E G V + + N + G+ ++V+ V + + R+ Sbjct: 629 VKENETGTVPPEALSDFPEHNALVQSTLREGEKLKVVNVQDGVYSCRDVAYFNNKPTRVE 688 Query: 343 ------SLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFG----IFIGLDGGIDGLVH 392 L + P Q D + DFG F + LV Sbjct: 689 DVRVGQILRAYYVEPAPKQAARFRLALKDYTRRVVLKAKDFGYEKEAFPAMTPDQVVLVK 748 Query: 393 LS------DISWNVAGEEAVREY-KKG-DEIAAVVLQVDAERERISLGVKQLAEDPFNNW 444 + ++ + K G DE +L + +++ K + Sbjct: 749 VKRTGKEGELPMLRVSAKLEDVCRKAGTDEALRYMLAYLDDVKQLVTRFKSRDKP----- 803 Query: 445 VALNKKGAIVTGKVTAVDAKG--ATVELADGVE-------GYLRASEASRDRVEDATLVL 495 A G V+ V + G V L D G + Sbjct: 804 FAQYTIGQSVSCVVESFVDDGDQLVVRLGDSETEDPNAARGLA-------RKDPKKDGTY 856 Query: 496 SVGDEVEAKFTGVDRKNRAISLSV--RAKDEADEKDAIATVNKQEDAN 541 +VG+ + + VD + + + + + + + + N + N Sbjct: 857 TVGERLSGRVVWVDVERQLVHVCITKKLLKHVVDVAEGDSYNVDDRHN 904 Score = 56.5 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 68/509 (13%), Positives = 142/509 (27%), Gaps = 89/509 (17%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKD--VVLVDA-GLKSESAIPAEQFKNAQ 57 +T+ A + + R G + V I D + V G + + + + N + Sbjct: 425 ITDDDATIGSRFFSLDDLRVGDVYECRVTRILDDKRGLAVTLAGGRVKGIVMSH---NYR 481 Query: 58 GELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEK--AYEDAETVTGVINGK 115 + + + L +++ + L + ++ + A + + G + + Sbjct: 482 FTKQYAPKQSIKMRLIGIDEDKQQALFTNHPEYLRKSAKLILDRAAIKPDQKCLGTVISE 541 Query: 116 VKGGFTVEL-NGIRA----FLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSR 170 + F V N I A F D + G F V ++ + + + Sbjct: 542 TEKFFIVAFCNKITAILFKFCRSVTQDSERIDRLKP--GSVELFTVHEVTEDGAKITLIL 599 Query: 171 RAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL--GGVDGLLHITDMAWKRV 228 +N G + + G V L G + ++ Sbjct: 600 PFATGGDNL------------GHVSTATITGIFATGVDVYLVKENETGTVPPEALSDFPE 647 Query: 229 KH--PSEIVNVGDEITVK-----------VLKFDRERTRV-------SLGLKQLGEDPWV 268 + + G+++ V V F+ + TRV L + P Sbjct: 648 HNALVQSTLREGEKLKVVNVQDGVYSCRDVAYFNNKPTRVEDVRVGQILRAYYVEPAPKQ 707 Query: 269 AIAKRYPEGTKLTGRVTNLTDYG----CFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNV 324 A R V D+G F + LV + Sbjct: 708 AARFRLALKDYTRRVVLKAKDFGYEKEAFPAMTPDQVVLV------------KVKRTGKE 755 Query: 325 GD----VVEVMVLDIDEERR-----RISLGLKQ------CKANPWQQFAETHNKGDRVEG 369 G+ V + D+ + R L + + + G V Sbjct: 756 GELPMLRVSAKLEDVCRKAGTDEALRYMLAYLDDVKQLVTRFKSRDKPFAQYTIGQSVSC 815 Query: 370 KIKSITDFG--IFIGLDGGIDGLVHLSDISWNVAGEEAVR--EYKKGDEIAAVVLQVDAE 425 ++S D G + + L + + +A ++ + Y G+ ++ V+ VD E Sbjct: 816 VVESFVDDGDQLVVRLGDSET---EDPNAARGLARKDPKKDGTYTVGERLSGRVVWVDVE 872 Query: 426 RE--RISLGVKQLAEDPFNNWVALNKKGA 452 R+ + + K L Sbjct: 873 RQLVHVCITKKLLKHVVDVAEGDSYNVDD 901 Score = 48.4 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 44/127 (34%), Gaps = 20/127 (15%) Query: 416 AAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVE 475 A + Q++ ERE + VK ++G +V G V V V L + Sbjct: 52 QARLEQIEMEREELVQTVKAA-----PLQFKTAQEGMLVLGCVYKVQKLELLVSLPGRLF 106 Query: 476 GYLRASEASRDRVEDA---------------TLVLSVGDEVEAKFTGVDRKNRAISLSVR 520 G + + S + + SVG+ V K G D++ LS+ Sbjct: 107 GRVPVTAISGAYGKRLQSVVEGGEGGCCPGLEELYSVGELVYVKIKGKDQERWRFELSLD 166 Query: 521 AKDEADE 527 K+ E Sbjct: 167 PKELHSE 173 >UniRef50_D1X7G9 RNA binding S1 domain protein n=1 Tax=Streptomyces sp. ACT-1 RepID=D1X7G9_9ACTO Length = 278 Score = 178 bits (452), Expect = 5e-43, Method: Composition-based stats. Identities = 68/259 (26%), Positives = 118/259 (45%), Gaps = 13/259 (5%) Query: 276 EGTKLTGRVTNLTDYGCFVEI----EEGVE-GLVHVSEMDWTNKNIHPSKVVNVGDVVEV 330 G TGRV ++ D VE+ G G + ++ +PS+ V +G + Sbjct: 19 IGEARTGRVISVEDSEALVELDGFSGPGKALGRIPRGDLT-RKALGNPSEAVGIGQRLTF 77 Query: 331 MVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGID-- 388 V+ +D ++ + C+ + F +G G+++S+ +FG+F+ LDG D Sbjct: 78 EVIAVDWQQECVWASTSACEDPDLRVFLLGLRRGATHRGQVQSVHNFGVFVNLDGEPDNQ 137 Query: 389 --GLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVA 446 G + ++SW G G+ + ++ VD R ++ L +K L EDP Sbjct: 138 CTGFIRGPELSWRRIG-HPADAVTAGERVVGEIIGVDTRRGQVQLSLKALQEDPLVLVAG 196 Query: 447 LNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFT 506 + G + TG+VT + GA V +ADGVEG + +E D VE ++S G+E+ + Sbjct: 197 --QSGLVTTGQVTKLVPFGAFVRIADGVEGLVHNTEFRDDPVEHPGQIVSEGEEITVRIV 254 Query: 507 GVDRKNRAISLSVRAKDEA 525 VD ++LS R + Sbjct: 255 EVDLVRHRLTLSTRNLPQN 273 Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats. Identities = 65/275 (23%), Positives = 122/275 (44%), Gaps = 14/275 (5%) Query: 175 ESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDG------LLHITDMAWKRV 228 E ++S L L G G V ++ D A V+L G G + D+ K + Sbjct: 3 EPQSSEALKDFLSTLLIGEARTGRVISVEDSEALVELDGFSGPGKALGRIPRGDLTRKAL 62 Query: 229 KHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLT 288 +PSE V +G +T +V+ D ++ V + G G+V ++ Sbjct: 63 GNPSEAVGIGQRLTFEVIAVDWQQECVWASTSACEDPDLRVFLLGLRRGATHRGQVQSVH 122 Query: 289 DYGCFVEIEEGVE----GLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISL 344 ++G FV ++ + G + E+ W + HP+ V G+ V ++ +D R ++ L Sbjct: 123 NFGVFVNLDGEPDNQCTGFIRGPELSW-RRIGHPADAVTAGERVVGEIIGVDTRRGQVQL 181 Query: 345 GLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEE 404 LK + +P A G G++ + FG F+ + G++GLVH ++ + E Sbjct: 182 SLKALQEDPLVLVAG--QSGLVTTGQVTKLVPFGAFVRIADGVEGLVHNTEFRDDPV-EH 238 Query: 405 AVREYKKGDEIAAVVLQVDAERERISLGVKQLAED 439 + +G+EI +++VD R R++L + L ++ Sbjct: 239 PGQIVSEGEEITVRIVEVDLVRHRLTLSTRNLPQN 273 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 62/275 (22%), Positives = 112/275 (40%), Gaps = 25/275 (9%) Query: 7 QLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGL-----KSESAIPAEQFKNA---QG 58 + ++ L G G V++++ LV+ K+ IP Sbjct: 8 EALKDFLS--TLLIGEARTGRVISVEDSEALVELDGFSGPGKALGRIPRGDLTRKALGNP 65 Query: 59 ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 + +G + + AV+ S + + + L A T G + Sbjct: 66 SEAVGIGQRLTFEVIAVDWQQECVWASTSACEDPDLRVFLLGLRRGA-THRGQVQSVHNF 124 Query: 119 GFTVELNG-----IRAFLPGSLVDVRPVRDTLHLE--GKELEFKVIKLDQKRNNVVVSRR 171 G V L+G F+ G + R + G+ + ++I +D +R V +S + Sbjct: 125 GVFVNLDGEPDNQCTGFIRGPELSWRRIGHPADAVTAGERVVGEIIGVDTRRGQVQLSLK 184 Query: 172 AVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKH 230 A+ E Q G+ G V L +GAFV + GV+GL+H T+ V+H Sbjct: 185 ALQEDPLVLVAGQS------GLVTTGQVTKLVPFGAFVRIADGVEGLVHNTEFRDDPVEH 238 Query: 231 PSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGED 265 P +IV+ G+EITV++++ D R R++L + L ++ Sbjct: 239 PGQIVSEGEEITVRIVEVDLVRHRLTLSTRNLPQN 273 Score = 99.6 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 39/184 (21%), Positives = 72/184 (39%), Gaps = 10/184 (5%) Query: 352 NPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDG-----GIDGLVHLSDISWNVAGEEAV 406 + F T G+ G++ S+ D + LDG G + D++ G Sbjct: 8 EALKDFLSTLLIGEARTGRVISVEDSEALVELDGFSGPGKALGRIPRGDLTRKALG-NPS 66 Query: 407 REYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGA 466 G + V+ VD ++E + + ++ ++GA G+V +V G Sbjct: 67 EAVGIGQRLTFEVIAVDWQQECVWASTSACEDPDLRVFLLGLRRGATHRGQVQSVHNFGV 126 Query: 467 TVELA----DGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAK 522 V L + G++R E S R+ ++ G+ V + GVD + + LS++A Sbjct: 127 FVNLDGEPDNQCTGFIRGPELSWRRIGHPADAVTAGERVVGEIIGVDTRRGQVQLSLKAL 186 Query: 523 DEAD 526 E Sbjct: 187 QEDP 190 Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 33/95 (34%), Gaps = 3/95 (3%) Query: 4 SFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE-- 61 S L E+ L + + G + G V + V E + +F++ E Sbjct: 182 SLKALQEDPLVLVAGQSGLVTTGQVTKLVPFGAFVRIADGVEGLVHNTEFRDDPVEHPGQ 241 Query: 62 -IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAW 95 + G+E+ V + V+ LS ++ Sbjct: 242 IVSEGEEITVRIVEVDLVRHRLTLSTRNLPQNGKR 276 >UniRef50_P51345 30S ribosomal protein S1, chloroplastic n=2 Tax=Porphyra RepID=RR1_PORPU Length = 263 Score = 178 bits (451), Expect = 5e-43, Method: Composition-based stats. Identities = 63/262 (24%), Positives = 125/262 (47%), Gaps = 14/262 (5%) Query: 4 SFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQ 63 +FA + ++ + + G IV G + + + + VLVD G + +P ++ + Q Sbjct: 12 NFAAVLQKY--KYDLNLGDIVAGTIFSFELNGVLVDIGTPVSAYLPIQEVSSNQELNNFN 69 Query: 64 ---VGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120 + D + L + +LS + + AW + + + + I G KGG Sbjct: 70 SLNINDTREFFLLDYNVESRQLILSIRRLEYIRAWKRIRQLLAEDSLLDVRIKGFNKGGM 129 Query: 121 TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180 V L GI F+P S ++ K ++ K++ +++K NN+++S R + ++ S Sbjct: 130 IVNLEGISGFVPNSHLN--NFSKNTSSTNKFIKLKLLNVEEKSNNLILSHRRALIAQAS- 186 Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 NL G ++G++ +T YG F+ G + GL+HI+++ K+V+ +GD Sbjct: 187 ------SNLIVGNIIEGVINQITPYGLFIKAGNLKGLVHISEINVKQVERIPSQFKIGDT 240 Query: 241 ITVKVLKFDRERTRVSLGLKQL 262 I ++ D+++ R+SL +K L Sbjct: 241 IKAVIIHVDKKQGRLSLSMKHL 262 Score = 152 bits (383), Expect = 5e-35, Method: Composition-based stats. Identities = 48/257 (18%), Positives = 108/257 (42%), Gaps = 12/257 (4%) Query: 268 VAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDV 327 G + G + + G V+I V + + E+ + + + +N+ D Sbjct: 18 QKYKYDLNLGDIVAGTIFSFELNGVLVDIGTPVSAYLPIQEVSSNQELNNFNS-LNINDT 76 Query: 328 VEVMVLDIDEERRRISLGLKQCK-ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGG 386 E +LD + E R++ L +++ + W++ + + ++ +IK G+ + L+ G Sbjct: 77 REFFLLDYNVESRQLILSIRRLEYIRAWKRIRQLLAEDSLLDVRIKGFNKGGMIVNLE-G 135 Query: 387 IDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVA 446 I G V S ++ + ++ I +L V+ + + L ++ + + Sbjct: 136 ISGFVPNSHLNNFSKNTSSTNKF-----IKLKLLNVEEKSNNLILSHRRALIAQAS---S 187 Query: 447 LNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFT 506 G I+ G + + G ++ A ++G + SE + +VE +GD ++A Sbjct: 188 NLIVGNIIEGVINQITPYGLFIK-AGNLKGLVHISEINVKQVERIPSQFKIGDTIKAVII 246 Query: 507 GVDRKNRAISLSVRAKD 523 VD+K +SLS++ Sbjct: 247 HVDKKQGRLSLSMKHLK 263 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 65/259 (25%), Positives = 123/259 (47%), Gaps = 13/259 (5%) Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNV 237 +A + +L G V G + + G VD+G V L I +++ + + +N+ Sbjct: 14 AAVLQKYKYDLNLGDIVAGTIFSFELNGVLVDIGTPVSAYLPIQEVSSNQELNNFNSLNI 73 Query: 238 GDEITVKVLKFDRERTRVSLGLKQLG-EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI 296 D +L ++ E ++ L +++L W I + E + L R+ G V + Sbjct: 74 NDTREFFLLDYNVESRQLILSIRRLEYIRAWKRIRQLLAEDSLLDVRIKGFNKGGMIVNL 133 Query: 297 EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQ 356 E G+ G V S ++ +KN + +++ +L+++E+ + L ++ Q Sbjct: 134 E-GISGFVPNSHLNNFSKNTSSTNKF-----IKLKLLNVEEKSNNLILSHRRAL---IAQ 184 Query: 357 FAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIA 416 + G+ +EG I IT +G+FI G + GLVH+S+I+ E ++K GD I Sbjct: 185 ASSNLIVGNIIEGVINQITPYGLFIK-AGNLKGLVHISEINVKQV-ERIPSQFKIGDTIK 242 Query: 417 AVVLQVDAERERISLGVKQ 435 AV++ VD ++ R+SL +K Sbjct: 243 AVIIHVDKKQGRLSLSMKH 261 Score = 74.2 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 30/173 (17%), Positives = 68/173 (39%), Gaps = 7/173 (4%) Query: 355 QQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDE 414 Q++ N GD V G I S G+ + + + + + ++S N D Sbjct: 18 QKYKYDLNLGDIVAGTIFSFELNGVLVDIGTPVSAYLPIQEVSSNQELNNFNS-LNINDT 76 Query: 415 IAAVVLQVDAERERISLGVKQLAE-DPFNNWVALNKKGAIVTGKVTAVDAKGATVELADG 473 +L + E ++ L +++L + L + +++ ++ + G V L +G Sbjct: 77 REFFLLDYNVESRQLILSIRRLEYIRAWKRIRQLLAEDSLLDVRIKGFNKGGMIVNL-EG 135 Query: 474 VEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEAD 526 + G++ S + ++ + ++ K V+ K+ + LS R A Sbjct: 136 ISGFVPNSHL-NNFSKNTSSTNK---FIKLKLLNVEEKSNNLILSHRRALIAQ 184 Score = 51.5 bits (122), Expect = 8e-05, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 38/93 (40%) Query: 447 LNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFT 506 G IV G + + + G V++ V YL E S ++ + L++ D E Sbjct: 23 DLNLGDIVAGTIFSFELNGVLVDIGTPVSAYLPIQEVSSNQELNNFNSLNINDTREFFLL 82 Query: 507 GVDRKNRAISLSVRAKDEADEKDAIATVNKQED 539 + ++R + LS+R + I + ++ Sbjct: 83 DYNVESRQLILSIRRLEYIRAWKRIRQLLAEDS 115 >UniRef50_UPI000180B142 PREDICTED: similar to Protein RRP5 homolog (Programmed cell death protein 11) n=1 Tax=Ciona intestinalis RepID=UPI000180B142 Length = 1581 Score = 177 bits (450), Expect = 8e-43, Method: Composition-based stats. Identities = 68/366 (18%), Positives = 130/366 (35%), Gaps = 34/366 (9%) Query: 185 LLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 E++ G V+ + + G V LG +I N G+ I + Sbjct: 18 RYEDIIPGTLVQCKITQVQQKGLQVVLG-----------------SGKKIFNEGNVIRCR 60 Query: 245 VLKFDRERTRVSLGLKQLGEDPWVAIAKRY---PEGTKLTGRVTNLTDYGCFVEIEEGVE 301 VL +R + L KQ + I Y + G ++N+ +GCFV+ + V Sbjct: 61 VLTSSAKRRHLHLTHKQSLVGSKLPIVTNYDVIKRDDVIHGFISNIKPFGCFVKFYDDVT 120 Query: 302 GLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETH 361 G V ++ T +P K+ +G VV+ V+ D +++ L + N + Sbjct: 121 GFVPHHQLSAT-PVQNPQKLFFIGQVVKCRVISNDAGNKKLKLSFR--TMNEKRVVEHNV 177 Query: 362 NKGDRVEGKIKSITDFGIFIGLDGGI-------DGLVHLSDISWNVAGEEAVREYKKGDE 414 G V K+ + + + G ++ +S V ++ + + Sbjct: 178 KPGMMVNVKVIMKEQSHLSVKIMGDESEQSDWPTAMISQYQLSDFVEISRSIFTLVREET 237 Query: 415 IAAVVLQVDAERERISLGVKQLA-EDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADG 473 + + V A +++I + K E G ++ V + + G VE G Sbjct: 238 VLNDCIVV-ATKQQIQVSRKHSLVERGLKVDFCDLIIGQLLRCFVRQITSYGVFVETVGG 296 Query: 474 VEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEA--DEKDAI 531 + G S + D G V A TG++ + +S+R DE+ I Sbjct: 297 LVGLCPKSAICDKYLADVNDRFITGQSVVAVVTGIEDDRKRFLVSLRLSQCPLIDEQPII 356 Query: 532 ATVNKQ 537 + + + Sbjct: 357 SQYSDE 362 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 85/573 (14%), Positives = 177/573 (30%), Gaps = 75/573 (13%) Query: 18 TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK---NAQGELEIQVGDEVDVALDA 74 + ++ G + I V +P Q + +G V + + Sbjct: 93 IKRDDVIHGFISNIKPFGCFVKFYDDVTGFVPHHQLSATPVQNPQKLFFIGQVVKCRVIS 152 Query: 75 VEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIR------ 128 + G + LS + V + K + +V++ G Sbjct: 153 NDAGNKKLKLSFRTMNEKRVVEH---NVKPGMMVNVKVIMKEQSHLSVKIMGDESEQSDW 209 Query: 129 --AFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQL- 185 A + + V + + V + + +VV+ + I+ + Sbjct: 210 PTAMISQYQLSD-FVE-----ISRSIFTLVREETVLNDCIVVATKQQIQVSRKHSLVERG 263 Query: 186 ----LENLQEGMEVKGIVKNLTDYGAFVD-LGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 +L G ++ V+ +T YG FV+ +GG+ GL + + K + ++ G Sbjct: 264 LKVDFCDLIIGQLLRCFVRQITSYGVFVETVGGLVGLCPKSAICDKYLADVNDRFITGQS 323 Query: 241 ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV 300 + V + +R R + L+ L + P + P ++ + + + + F + + V Sbjct: 324 VVAVVTGIEDDRKRFLVSLR-LSQCP---LIDEQPIISQYSDEMKKIKKF--FPKDKLKV 377 Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDVVE---VMVLDIDEERRRISLG--LKQCKANPWQ 355 LV V+ D T GD+ E +V+ D + + + + Sbjct: 378 GDLVTVATKDGTRSIEGIPGFEVRGDITEDSTAIVVHKDFATKVLFVTNKMPVVDFYSSS 437 Query: 356 QFAETHNKGDRVEGKIKSITDF---GIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKG 412 + ++ ++ D G + + E + G Sbjct: 438 KQKVKEMLERQIRAQVLFFNDDIIMGFVVNNGRLVQVF-------RKNHWNEKKVLVEIG 490 Query: 413 DEIAAVVLQVDAERERISLG-VKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVEL- 470 I ++ +R+ + LG +++ + D + G+ V G+VT++ A A V+L Sbjct: 491 QNINIEII----QRKNLLLGKIQESSSDVGDFPFLDISVGSKVRGEVTSIRATTAIVKLT 546 Query: 471 ------ADGVEGYLRASEASRD--RVEDATLVLSVGDEVEAKFTGV-------------- 508 G + ASE + + L VGD + GV Sbjct: 547 SLPIVHGHHQVGRIHASEVFEECKQNVSPMNNLKVGDTISCTVIGVRDVMTHRFLEITNR 606 Query: 509 DRKNRAISLSVRAKDEADEKDAIATVNKQEDAN 541 I LS+ A Sbjct: 607 KATRGVIELSLWRSVPPPGDKIDAEFPFDRSRE 639 Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats. Identities = 62/364 (17%), Positives = 125/364 (34%), Gaps = 39/364 (10%) Query: 13 LKEIETRPGSIVRGVVVAIDKDVVLVDA-------GLKSESAIPAEQF-----KNAQGEL 60 ++ GS VRG V +I +V G I A + +N Sbjct: 845 FPFLDISVGSKVRGEVASIRATTAIVKLTSLPIVHGHHQVGRIHASEVFEECKQNVSPMN 904 Query: 61 EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYE---DAETVTGVI-NGKV 116 ++VGD + + V D L K I L + + + Sbjct: 905 NLKVGDTISCTVIGVRDVMTHRFLEITNRKATRGVIELSLWRSVPPPGDKIDAEFPFDRS 964 Query: 117 KGGFTVELN-GIRAFLPGSL-VDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVI 174 + + VE+ G+R F+P L +D + +G+ +E V+K + ++ + R + Sbjct: 965 RESYLVEVRPGVRGFIPKLLAMDGGKMGQGKMKQGRCVECIVVKH---GDPIMFACRGAL 1021 Query: 175 ESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSE 233 + + + ++ G G ++ + GA V + G + TD++ + + + Sbjct: 1022 ----TNGVGEDVCDIAVGHVTNGEIREIVADGALVRMELRGKGKIFSTDISDEFLDGMLK 1077 Query: 234 IVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAK---------RYPEGTKLTGRV 284 VG I +V+ E L +++ + G + Sbjct: 1078 NFRVGQIIRCRVIGRSNEG--FVLTMRKSLMHEICDLEPVDRDICDITDVKPKQIFRGII 1135 Query: 285 TNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPS--KVVNVGDVVEVMVLDIDEERRRI 342 ++ G FV + V G V + + H K+ G +V V+ + + R+ Sbjct: 1136 KVCSESGIFVTLSRCVHGRVTFANASKFYISDHTEAIKIFYPGRIVHCCVISVSPQDGRV 1195 Query: 343 SLGL 346 L + Sbjct: 1196 ELSM 1199 Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats. Identities = 71/415 (17%), Positives = 138/415 (33%), Gaps = 62/415 (14%) Query: 142 RDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKN 201 + L G+ + ++I + ++ + I+ +S D ++ G +V+G V + Sbjct: 810 KKVLVEIGQNINIEII-----QRKNLLLGK--IQESSSDVGDFPFLDISVGSKVRGEVAS 862 Query: 202 LTDYGAFVDL--------GGVDGLLHITDMAW--KRVKHPSEIVNVGDEITVKVLKFD-- 249 + A V L G +H +++ K+ P + VGD I+ V+ Sbjct: 863 IRATTAIVKLTSLPIVHGHHQVGRIHASEVFEECKQNVSPMNNLKVGDTISCTVIGVRDV 922 Query: 250 ------------RERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE 297 R + L L + P I +P VE+ Sbjct: 923 MTHRFLEITNRKATRGVIELSLWRSVPPPGDKIDAEFPFDRSRES---------YLVEVR 973 Query: 298 EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDI-DEERRRISLGLKQCKANPWQQ 356 GV G + + + + G VE +V+ D I + N + Sbjct: 974 PGVRGFIPK--LLAMDGGKMGQGKMKQGRCVECIVVKHGDP----IMFACRGALTNGVGE 1027 Query: 357 FAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIA 416 G G+I+ I G + ++ G + +DIS + ++ ++ G I Sbjct: 1028 DVCDIAVGHVTNGEIREIVADGALVRMELRGKGKIFSTDISDEF-LDGMLKNFRVGQIIR 1086 Query: 417 AVVLQVDAERERISLGVKQLAEDPFNN---------WVALNKKGAIVTGKVTAVDAKGAT 467 V+ E L +++ + + K I G + G Sbjct: 1087 CRVIG--RSNEGFVLTMRKSLMHEICDLEPVDRDICDITDVKPKQIFRGIIKVCSESGIF 1144 Query: 468 VELADGVEGYLRASEASRDRVEDATLVLSV---GDEVEAKFTGVDRKNRAISLSV 519 V L+ V G + + AS+ + D T + + G V V ++ + LS+ Sbjct: 1145 VTLSRCVHGRVTFANASKFYISDHTEAIKIFYPGRIVHCCVISVSPQDGRVELSM 1199 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 37/187 (19%), Positives = 72/187 (38%), Gaps = 22/187 (11%) Query: 342 ISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVA 401 + L K+ + E G V+ KI + G+ + L G Sbjct: 3 LELSAKRSVLDAKYLRYEDIIPGTLVQCKITQVQQKGLQVVLGSG--------------- 47 Query: 402 GEEAVREYKKGDEIAAVVLQVDAERERISLGVKQL---AEDPFNNWVALNKKGAIVTGKV 458 + + +G+ I VL A+R + L KQ ++ P + K+ ++ G + Sbjct: 48 ----KKIFNEGNVIRCRVLTSSAKRRHLHLTHKQSLVGSKLPIVTNYDVIKRDDVIHGFI 103 Query: 459 TAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLS 518 + + G V+ D V G++ + S V++ + +G V+ + D N+ + LS Sbjct: 104 SNIKPFGCFVKFYDDVTGFVPHHQLSATPVQNPQKLFFIGQVVKCRVISNDAGNKKLKLS 163 Query: 519 VRAKDEA 525 R +E Sbjct: 164 FRTMNEK 170 Score = 78.1 bits (191), Expect = 9e-13, Method: Composition-based stats. Identities = 86/559 (15%), Positives = 179/559 (32%), Gaps = 95/559 (16%) Query: 4 SFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDA-GLKSE-SAIPAEQFKNAQGELE 61 SF + E+ + E +PG +V V+ ++ + V G +SE S P Q Sbjct: 163 SFRTMNEKRVVEHNVKPGMMVNVKVIMKEQSHLSVKIMGDESEQSDWPTAMISQYQLSDF 222 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEK--------AYEDAETVTGVIN 113 +++ + + +++ ++ + +L + + + + Sbjct: 223 VEISRSIFTLVREETVLNDCIVVATKQQIQVSRKHSLVERGLKVDFCDLIIGQLLRCFVR 282 Query: 114 GKVKGGFTVE-LNGIRAFLPGSLVDVRPVRDTLH--LEGKELEFKVIKLDQKRNNVVVSR 170 G VE + G+ P S + + + D + G+ + V ++ R +VS Sbjct: 283 QITSYGVFVETVGGLVGLCPKSAICDKYLADVNDRFITGQSVVAVVTGIEDDRKRFLVSL 342 Query: 171 R--------------AVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDG 216 R + ++ + L+ G V K+ T + G+ G Sbjct: 343 RLSQCPLIDEQPIISQYSDEMKKIKKFFPKDKLKVGDLVTVATKDGTR-----SIEGIPG 397 Query: 217 LLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSL--GLKQLGEDPWVAIAKR- 273 ++ + + IV V + KVL + V KQ ++ + Sbjct: 398 F----EVRGDITEDSTAIV-VHKDFATKVLFVTNKMPVVDFYSSSKQKVKEMLERQIRAQ 452 Query: 274 --YPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVM 331 + + G V N G V++ N +V +G + + Sbjct: 453 VLFFNDDIIMGFVVN---NGRLVQVFRK-------------NHWNEKKVLVEIGQNINIE 496 Query: 332 VLDIDEERRRISLG-LKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGL------- 383 ++ +R+ + LG +++ ++ + G +V G++ SI + L Sbjct: 497 II----QRKNLLLGKIQESSSDVGDFPFLDISVGSKVRGEVTSIRATTAIVKLTSLPIVH 552 Query: 384 DGGIDGLVHLSDISWN-VAGEEAVREYKKGDEIAAVVLQVD--------------AERER 428 G +H S++ + K GD I+ V+ V A R Sbjct: 553 GHHQVGRIHASEVFEECKQNVSPMNNLKVGDTISCTVIGVRDVMTHRFLEITNRKATRGV 612 Query: 429 ISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRV 488 I L + + P + A + VE+ GV G++ + D Sbjct: 613 IELSLWRSVPPPGDKIDAEFP---------FDRSRESYLVEVRPGVRGFIPK-LLAMDGG 662 Query: 489 EDATLVLSVGDEVEAKFTG 507 + + G VE Sbjct: 663 KMGQGKMKQGRCVECIVVK 681 Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 47/304 (15%), Positives = 118/304 (38%), Gaps = 29/304 (9%) Query: 235 VNVGDEITVKVLKF-DRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCF 293 V +G I +++++ + ++ +G+ P++ I+ G+K+ G V ++ Sbjct: 814 VEIGQNINIEIIQRKNLLLGKIQESSSDVGDFPFLDIS----VGSKVRGEVASIRATTAI 869 Query: 294 VEI-------EEGVEGLVHVSEMDWT-NKNIHPSKVVNVGDVVEVMVLDI-DEERRR-IS 343 V++ G +H SE+ +N+ P + VGD + V+ + D R + Sbjct: 870 VKLTSLPIVHGHHQVGRIHASEVFEECKQNVSPMNNLKVGDTISCTVIGVRDVMTHRFLE 929 Query: 344 LGLKQCKAN--PWQQFAETHNKGDRVEGKI---KSITDFGIFIGLDGGIDGLVHLSDISW 398 + ++ + GD+++ + +S + + + G+ G + + Sbjct: 930 ITNRKATRGVIELSLWRSVPPPGDKIDAEFPFDRSRESY--LVEVRPGVRGFIPK--LLA 985 Query: 399 NVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKV 458 G+ + K+G + +V+ + I + + V G + G++ Sbjct: 986 MDGGKMGQGKMKQGRCVECIVV---KHGDPIMFACRGALTNGVGEDVCDIAVGHVTNGEI 1042 Query: 459 TAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLS 518 + A GA V + +G + +++ S + ++ VG + + G + L+ Sbjct: 1043 REIVADGALVRMELRGKGKIFSTDISDEFLDGMLKNFRVGQIIRCRVIGRSNEG--FVLT 1100 Query: 519 VRAK 522 +R Sbjct: 1101 MRKS 1104 Score = 43.0 bits (100), Expect = 0.028, Method: Composition-based stats. Identities = 17/122 (13%), Positives = 37/122 (30%), Gaps = 18/122 (14%) Query: 429 ISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRV 488 + L K+ D G +V K+T V KG V L G Sbjct: 3 LELSAKRSVLDAKYLRYEDIIPGTLVQCKITQVQQKGLQVVLGSG--------------- 47 Query: 489 EDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMA 548 + + G+ + + K R + L+ + + + + + + + ++ Sbjct: 48 ---KKIFNEGNVIRCRVLTSSAKRRHLHLTHKQSLVGSKLPIVTNYDVIKRDDVIHGFIS 104 Query: 549 EA 550 Sbjct: 105 NI 106 >UniRef50_C4QQ62 Programmed cell death protein 11 (Pre-rRNA processing protein rrp5), putative n=1 Tax=Schistosoma mansoni RepID=C4QQ62_SCHMA Length = 769 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 91/577 (15%), Positives = 181/577 (31%), Gaps = 92/577 (15%) Query: 20 PGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGF 79 PG+ + +V ++ + SE + + + + Q+G +V V + V+ Sbjct: 198 PGTCLHASIVKKVTSTLVAEF---SEYFVSISRTHYIGNKEDYQIGAKVFVCIILVDPST 254 Query: 80 GET--LLSREKAKRHEAWITLEKAYEDAETVT----GVINGKVKGGFTVEL---NGIRAF 130 + L + + + + T ++ K V+L NG++A Sbjct: 255 KQLTGSLLPHLVNPIPSVLNISEMLSKCPVGTRFSGSLVERVNKRAVLVKLPKTNGLKAV 314 Query: 131 LPGSLVDVRPVRDTLHLE-GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENL 189 + + + L G +L ++ D N V A + + L L Sbjct: 315 IRIPKTGTKNNENFKSLVVGSKLTCRITDHDFLENVAV----ATTNKKLLSLPFLSLHEL 370 Query: 190 QEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKF 248 + G +V VK + G V L G + GL+ +K E G++++ VL+ Sbjct: 371 KPGNKVSATVKRYSKTGIVVHLEGRIHGLIPYLHTTDINLKDHREKFKAGEKVSCLVLQL 430 Query: 249 DRERTRVSLGLK------QLGEDPWVAIAKRYPEGT----KLTGRVTNLTDYGCFVEIEE 298 D ++ L K +L + G + G + +++ G + + Sbjct: 431 DECANKLILTAKPGLLNAELPIFGSHEMYSALKNGNNNQLLIVGFIVKVSEKGLLISGLD 490 Query: 299 GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVL---------DIDEERRRIS----LG 345 + G + E +++I G V+++ +++++ R I L Sbjct: 491 NIRGWIPRRETGLADEDI-LQTNFYRGQVLKMKFKREINISSENEVEKDSRNIRSKYMLS 549 Query: 346 LKQCKANPWQQFAETHN---KGDRVEGKIKSITDFGIFIGLDGGI----------DGLVH 392 LK + N G + + D GI + L G + Sbjct: 550 LKFHSKKTKNMQSIFLNSVQIGQLFRATVNQVQDTGISLNLYDKNINDTVTPVLGTGFLS 609 Query: 393 LSDISWNVAGEEAVREY----KKGDEIA-----AVVLQVDAERERISLGVKQ-------- 435 S +S + ++ + Y K G + V+ +D ++ + L + Sbjct: 610 FSQLSDYESNQQLLSRYIKNIKPGSTLDWNHSARNVVVIDKGKQTVILSARPTLVQAASD 669 Query: 436 -----------------LAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYL 478 F + G+ V+ G V G+ G Sbjct: 670 LKTNINIDVDMVDSEASDKRPGFLRTFDELQVGSQWFAWVSHHKDYGVFVHFPAGIYGLA 729 Query: 479 RASEASRDR---VEDATLVLSVGDEVEAKFTGVDRKN 512 S R + T + VG V K V KN Sbjct: 730 PKHLLSDFRTQSNTNWTELFPVGATVITKIVEVTLKN 766 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 82/559 (14%), Positives = 186/559 (33%), Gaps = 69/559 (12%) Query: 26 GVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE-------------------LEIQVGD 66 GV+ ++ K + V + + E +VG Sbjct: 9 GVIKSVQKLYLEVQLPHGFLGRVNIYDVSDKYTELLRESAESGIIQDDLVELSDMFKVGQ 68 Query: 67 EVDVALDAVEDGFGETLLSREKA---KRHEAWITLEKAYEDAETVTGVINGKVKGGFTVE 123 V + ++ G R + + K + G + G+ V+ Sbjct: 69 TVRCFIKEADNSRGSGSTKRYIVSLNPKMVNKAVISKNVKPHMVFVGSVVSVEDHGYIVD 128 Query: 124 --LNGIRAFLPGSLVDVRPVRDTLHLEGKELEFK------VIKLDQKRNNVVVSRRAVIE 175 + + FLP V D G + F ++ KR V +R Sbjct: 129 PGVARMNCFLPKDQV------DVNLDIGSLIPFTPHVSDPLVNSSSKRVLKVTTRLDSTL 182 Query: 176 SENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIV 235 S S + + + G + + + + + I+ + + + Sbjct: 183 SVLSPDSRVNFDCMLPGTCLHASIVKKVTSTLVAEFS--EYFVSISRTH--YIGNKED-Y 237 Query: 236 NVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAK------RYPEGTKLTGR-VTNLT 288 +G ++ V ++ D +++ L +P ++ + P GT+ +G V + Sbjct: 238 QIGAKVFVCIILVDPSTKQLTGSLLPHLVNPIPSVLNISEMLSKCPVGTRFSGSLVERVN 297 Query: 289 DYGCFVEIE--EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGL 346 V++ G++ ++ + + T N + +V VG + + D D Sbjct: 298 KRAVLVKLPKTNGLKAVIRIPK-TGTKNNENFKSLV-VGSKLTCRITDHDFLENVAVATT 355 Query: 347 KQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAV 406 + + G++V +K + GI + L+G I GL+ + ++ ++ Sbjct: 356 NKKLLSLPFLSLHELKPGNKVSATVKRYSKTGIVVHLEGRIHGLIPYLH-TTDINLKDHR 414 Query: 407 REYKKGDEIAAVVLQVDAERERISLGVKQLAED------PFNNWVALNKKGA----IVTG 456 ++K G++++ +VLQ+D ++ L K + + + K G ++ G Sbjct: 415 EKFKAGEKVSCLVLQLDECANKLILTAKPGLLNAELPIFGSHEMYSALKNGNNNQLLIVG 474 Query: 457 KVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAIS 516 + V KG + D + G++ E + G ++ K R I+ Sbjct: 475 FIVKVSEKGLLISGLDNIRGWIPRRETGLADEDILQTNFYRGQVLKMK------FKREIN 528 Query: 517 LSVRAKDEADEKDAIATVN 535 +S + E D ++ + Sbjct: 529 ISSENEVEKDSRNIRSKYM 547 Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats. Identities = 90/592 (15%), Positives = 197/592 (33%), Gaps = 75/592 (12%) Query: 7 QLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAG-LKSESAIPAEQFKNAQGELEIQVG 65 ++ +++ +P + G VV+++ +VD G + +P +Q ++ + +G Sbjct: 96 KMVNKAVISKNVKPHMVFVGSVVSVEDHGYIVDPGVARMNCFLPKDQV-----DVNLDIG 150 Query: 66 DEVDV--ALDA--VEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGV-----INGKV 116 + + V L + + ++ + + G I KV Sbjct: 151 SLIPFTPHVSDPLVNSSSKRVLKVTTRLDSTLSVLSPDSRVNFDCMLPGTCLHASIVKKV 210 Query: 117 KGGFTVELNGIRAFLPGSLVDVRPVRDTLHL-EGKELEFKVIKLDQKRNNVV--VSRRAV 173 E + F+ S + + G ++ +I +D + + V Sbjct: 211 TSTLVAEFSEY--FVSISR--THYIGNKEDYQIGAKVFVCIILVDPSTKQLTGSLLPHLV 266 Query: 174 IESENSAERDQLLENLQEGMEVKG-IVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPS 232 + ++L G G +V+ + V L +GL + + K+ Sbjct: 267 NPIPSVLNISEMLSKCPVGTRFSGSLVERVNKRAVLVKLPKTNGLKAVIRIPKTGTKNNE 326 Query: 233 EI--VNVGDEITVKVLKFD-RERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTD 289 + VG ++T ++ D E V+ K+L P++++ G K++ V + Sbjct: 327 NFKSLVVGSKLTCRITDHDFLENVAVATTNKKLLSLPFLSL-HELKPGNKVSATVKRYSK 385 Query: 290 YGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQC 349 G V +E + GL+ N H + G+ V +VL +DE ++ L K Sbjct: 386 TGIVVHLEGRIHGLIPYLHTTDINLKDH-REKFKAGEKVSCLVLQLDECANKLILTAKPG 444 Query: 350 KANPW------QQFAETHNKGD----RVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWN 399 N + G+ + G I +++ G+ I I G + + + Sbjct: 445 LLNAELPIFGSHEMYSALKNGNNNQLLIVGFIVKVSEKGLLISGLDNIRGWIPRRE-TGL 503 Query: 400 VAGEEAVREYKKGDEIAAVVL---------QVDAERERIS----LGVKQ---LAEDPFNN 443 + + +G + +V+ + I L +K ++ + Sbjct: 504 ADEDILQTNFYRGQVLKMKFKREINISSENEVEKDSRNIRSKYMLSLKFHSKKTKNMQSI 563 Query: 444 WVALNKKGAIVTGKVTAVDAKGATVELADGV----------EGYLRASEASR-----DRV 488 ++ + G + V V G ++ L D G+L S+ S + Sbjct: 564 FLNSVQIGQLFRATVNQVQDTGISLNLYDKNINDTVTPVLGTGFLSFSQLSDYESNQQLL 623 Query: 489 EDATLVLSVGDEV----EAK-FTGVDRKNRAISLSVRAKDEADEKDAIATVN 535 + G + A+ +D+ + + LS R D +N Sbjct: 624 SRYIKNIKPGSTLDWNHSARNVVVIDKGKQTVILSARPTLVQAASDLKTNIN 675 Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats. Identities = 56/399 (14%), Positives = 129/399 (32%), Gaps = 75/399 (18%) Query: 12 SLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQGELEIQVGDEV 68 L E +PG+ V V K ++V + IP + + + G++V Sbjct: 364 FLSLHELKPGNKVSATVKRYSKTGIVVHLEGRIHGLIPYLHTTDINLKDHREKFKAGEKV 423 Query: 69 DVALDAVEDGFGETLLS---------REKAKRHEAWITLEKAYEDAETVTGVINGKVKGG 119 + +++ + +L+ HE + L+ + + G I + G Sbjct: 424 SCLVLQLDECANKLILTAKPGLLNAELPIFGSHEMYSALKNGNNNQLLIVGFIVKVSEKG 483 Query: 120 FTVE-LNGIRAFLPGSL--VDVRPVRDTLHLEGKELEFKVI---------KLDQKRNNVV 167 + L+ IR ++P + + T G+ L+ K ++++ N+ Sbjct: 484 LLISGLDNIRGWIPRRETGLADEDILQTNFYRGQVLKMKFKREINISSENEVEKDSRNIR 543 Query: 168 VSRRAVIE---SENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV---------- 214 ++ + + L ++Q G + V + D G ++L Sbjct: 544 SKYMLSLKFHSKKTKNMQSIFLNSVQIGQLFRATVNQVQDTGISLNLYDKNINDTVTPVL 603 Query: 215 -DGLLHITDMAW-----KRVKHPSEIVNVGDEIT----VK-VLKFDRERTRVSLGLKQLG 263 G L + ++ + + + + G + + V+ D+ + V L + Sbjct: 604 GTGFLSFSQLSDYESNQQLLSRYIKNIKPGSTLDWNHSARNVVVIDKGKQTVILSARPTL 663 Query: 264 EDPWVAIA-------------------------KRYPEGTKLTGRVTNLTDYGCFVEIEE 298 + G++ V++ DYG FV Sbjct: 664 VQAASDLKTNINIDVDMVDSEASDKRPGFLRTFDELQVGSQWFAWVSHHKDYGVFVHFPA 723 Query: 299 GVEGLVHVSEMDWTN--KNIHPSKVVNVGDVVEVMVLDI 335 G+ GL + N + +++ VG V ++++ Sbjct: 724 GIYGLAPKHLLSDFRTQSNTNWTELFPVGATVITKIVEV 762 Score = 55.0 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 39/308 (12%), Positives = 89/308 (28%), Gaps = 62/308 (20%) Query: 282 GRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTN---------------KNIHPSKVVNVGD 326 G + ++ V++ G G V++ ++ + S + VG Sbjct: 9 GVIKSVQKLYLEVQLPHGFLGRVNIYDVSDKYTELLRESAESGIIQDDLVELSDMFKVGQ 68 Query: 327 VVEVMVLDIDEERR-----RISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFI 381 V + + D R R + L N ++ G + S+ D G + Sbjct: 69 TVRCFIKEADNSRGSGSTKRYIVSLNPKMVNK-AVISKNVKPHMVFVGSVVSVEDHGYIV 127 Query: 382 G--------------LDGGIDG--LVHLS-DISWNVAGEEAVREYKKGDEIAAVVLQVDA 424 +D +D L+ + +S + + R K Sbjct: 128 DPGVARMNCFLPKDQVDVNLDIGSLIPFTPHVSDPLVNSSSKRVLKV------------- 174 Query: 425 ERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEAS 484 R+ + L+ D N+ + G + + E + E ++ S Sbjct: 175 -TTRLDSTLSVLSPDSRVNFDCML-PGTCLHASIVKKVTSTLVAEFS---EYFVSIS--R 227 Query: 485 RDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEK---DAIATVNKQEDAN 541 + + +G +V VD + ++ S+ + ++K Sbjct: 228 THYIGNKED-YQIGAKVFVCIILVDPSTKQLTGSLLPHLVNPIPSVLNISEMLSKCPVGT 286 Query: 542 FSNNAMAE 549 + ++ E Sbjct: 287 RFSGSLVE 294 >UniRef50_Q31C04 SSU ribosomal protein S1P n=6 Tax=Prochlorococcus marinus RepID=Q31C04_PROM9 Length = 404 Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats. Identities = 67/282 (23%), Positives = 127/282 (45%), Gaps = 17/282 (6%) Query: 3 ESF---AQLFEESLKEIET--RPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA- 56 + F F E+L E E G + G V+AI+ D + VD G K+ +P ++ Sbjct: 110 DEFDFDESAFLEALNENEPIGATGETISGKVIAIESDGLYVDIGGKAPGYMPKKECGLGV 169 Query: 57 --QGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVING 114 + + +G E++V + ++ G +S ++W + + ++ E + +ING Sbjct: 170 ITNFKEKFSIGLEMEVLVIKEQNADGMVTVSARALILRQSWEKVSNSAKNGELIDVLING 229 Query: 115 KVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVI 174 +GG T +++G+R F+P S ++ +D GK L+ ++++ + +V+S + Sbjct: 230 FNRGGLTCDVDGLRGFIPRSQLEDG--QDYQSFVGKTLKVAFLEVNPESRKLVLSEKKA- 286 Query: 175 ESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEI 234 L +L G ++G V + YG F+DLGG GLLH + + ++ EI Sbjct: 287 ------SLVSKLTSLDLGQLIEGEVLAVKPYGFFIDLGGASGLLHQSSLTKGSIRSLREI 340 Query: 235 VNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPE 276 G+ I + + D E+ R+ L L I + Sbjct: 341 FREGEIIKALISEIDLEKGRIGLNTALLENSAGELIIDKEKV 382 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 45/282 (15%), Positives = 104/282 (36%), Gaps = 12/282 (4%) Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDID 336 G ++G+V + G +V+I G + E + + ++G +EV+V+ Sbjct: 133 GETISGKVIAIESDGLYVDIGGKAPGYMPKKECGLG-VITNFKEKFSIGLEMEVLVIKEQ 191 Query: 337 EERRRISLG-LKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSD 395 +++ W++ + + G+ ++ I G+ +D G+ G + S Sbjct: 192 NADGMVTVSARALILRQSWEKVSNSAKNGELIDVLINGFNRGGLTCDVD-GLRGFIPRSQ 250 Query: 396 ISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVT 455 + + G + L+V+ E ++ L K + + + G ++ Sbjct: 251 LEDGQDYQSF-----VGKTLKVAFLEVNPESRKLVLSEK---KASLVSKLTSLDLGQLIE 302 Query: 456 GKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAI 515 G+V AV G ++L G G L S ++ + + G+ ++A + +D + I Sbjct: 303 GEVLAVKPYGFFIDLG-GASGLLHQSSLTKGSIRSLREIFREGEIIKALISEIDLEKGRI 361 Query: 516 SLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAAKGE 557 L+ + + + I +A F + Sbjct: 362 GLNTALLENSAGELIIDKEKVMREATDRALKTKALFDKKNQD 403 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 52/242 (21%), Positives = 107/242 (44%), Gaps = 13/242 (5%) Query: 192 GMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDR 250 G + G V + G +VD+GG G + + + + E ++G E+ V V+K Sbjct: 133 GETISGKVIAIESDGLYVDIGGKAPGYMPKKECGLGVITNFKEKFSIGLEMEVLVIKEQN 192 Query: 251 ERTRVSLGLKQL-GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEM 309 V++ + L W ++ G + + G ++ +G+ G + S++ Sbjct: 193 ADGMVTVSARALILRQSWEKVSNSAKNGELIDVLINGFNRGGLTCDV-DGLRGFIPRSQL 251 Query: 310 DWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEG 369 + VG ++V L+++ E R++ L K+ + + G +EG Sbjct: 252 EDGQDYQSF-----VGKTLKVAFLEVNPESRKLVLSEKKA---SLVSKLTSLDLGQLIEG 303 Query: 370 KIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERI 429 ++ ++ +G FI L GG GL+H S ++ +++G+ I A++ ++D E+ RI Sbjct: 304 EVLAVKPYGFFIDL-GGASGLLHQSSLTKGSI-RSLREIFREGEIIKALISEIDLEKGRI 361 Query: 430 SL 431 L Sbjct: 362 GL 363 >UniRef50_Q0IED9 Programmed cell death protein 11 (Pre-rrna processing protein rrp5) n=1 Tax=Aedes aegypti RepID=Q0IED9_AEDAE Length = 1542 Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 84/559 (15%), Positives = 170/559 (30%), Gaps = 57/559 (10%) Query: 1 MTESFAQLFEES-----LKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAE---- 51 M + + E+S L+ + G ++ G V I K + V + +P Sbjct: 58 MEQD-KEELEQSVSAAPLQFRTAQEGMLLMGCVYKITKMDIKVSLPGRLYGTVPIMAISE 116 Query: 52 -----------------QFKNAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEA 94 + + E GD V V + + L+ + H Sbjct: 117 AYNNRLHSLVQKSLGGPEEQCPGLEELYHEGDLVYVKIKSKHSEKNHFGLTLDPQDLHS- 175 Query: 95 WITLEKAYEDAETVTGVINGKVKGGF--TVELNGIRAFLPGSLVDVRPVRDTLHLEGKEL 152 K + ++ + + G+ V + +RAFLP VR+ + G+ L Sbjct: 176 -ELTCKHLVEGLVLSATVEEEEDHGYQMNVGIRNVRAFLP-----THNVRNNKMIVGRNL 229 Query: 153 EFKVIKLDQKRNNVVVSRRA--VIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVD 210 V K+ + V RA E +++L G V V+++ G Sbjct: 230 FCSVEKVTHGNGSATVVLRAFKPTEPRKLEVAQPNVDSLVPGSVVTFTVESVLQNGLQGS 289 Query: 211 LGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAI 270 L + + ++ + + EI +VL V + L + ++ Sbjct: 290 LFDDTVPAFVNENMLEKPLSSLKQYELFKEIPARVLYVMPLTKHVFVTL-AHFDGNRASV 348 Query: 271 AKRYPEGTKL-TGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVV----NVG 325 A G + ++ + + G + +I + + L+ + + ++V VG Sbjct: 349 ADPVTPGKIIQDAKIIHKSLNGVWFQIGKKHKALLPKYILKSKYNQNYDEQIVMAKYQVG 408 Query: 326 DVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDF--GIFIGL 383 V V V+ + R I + + K GD +I + D G + L Sbjct: 409 SVHTVRVMRFEAFDRTIIVTDDEEKIETKYFTLNDLKVGDIYNCRITKVLDKKRGFLVSL 468 Query: 384 DGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNN 443 D + G+V E + Y ++ +D +R+ Sbjct: 469 D-NLKGIV-------TAYNFEPSKTYAANQMAKLRLIGIDEDRKMAQFTNHPEYLKKSAK 520 Query: 444 ---WVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDE 500 K+G G V + K V + + + + ++ L G Sbjct: 521 LLTSREDVKQGQRFLGTVISEQEKFFIVAFCNKITAICFKFCRAVTQDQNRISRLKPGVV 580 Query: 501 VEAKFTGVDRKNRAISLSV 519 V ++ + Sbjct: 581 DRFTVNEVSEDGSRFTVVI 599 Score = 75.0 bits (183), Expect = 7e-12, Method: Composition-based stats. Identities = 79/580 (13%), Positives = 178/580 (30%), Gaps = 80/580 (13%) Query: 18 TRPGSIVR-GVVVAIDKDVVLVDAGLKSESAIPA--------EQFKNAQGELEIQVGDEV 68 PG I++ ++ + V G K ++ +P + + + QVG Sbjct: 352 VTPGKIIQDAKIIHKSLNGVWFQIGKKHKALLPKYILKSKYNQNYDEQIVMAKYQVGSVH 411 Query: 69 DVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKV--KGGFTVELNG 126 V + E +++ ++ K + TL + + I + K GF V L+ Sbjct: 412 TVRVMRFEAFDRTIIVTDDEEKIETKYFTLND-LKVGDIYNCRITKVLDKKRGFLVSLDN 470 Query: 127 IRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLL 186 ++ + + + + + ++I +D+ R + +++ Sbjct: 471 LKGIVTAYNFEPSK----TYAANQMAKLRLIGIDEDRKMAQFTNHPEYLKKSAKLL-TSR 525 Query: 187 ENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKV 245 E++++G G V + + V + + A + ++ + G V Sbjct: 526 EDVKQGQRFLGTVISEQEKFFIVAFCNKITAICFKFCRAVTQDQNRISRLKPGVVDRFTV 585 Query: 246 LKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI-EEGVEGLV 304 + + +R ++ + A+ G ++G +T + G + + +E G V Sbjct: 586 NEVSEDGSRFTVVI--------PLDAESENLGHIVSGTITGIYATGADIYLVKENATGTV 637 Query: 305 HVSEMDWTNKNIHP-SKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNK 363 + + V+ G+ + V ++ + S + Sbjct: 638 PPELFSDFPPHNALYASVLKEGEQLRV----VNVKENVYSC-RDVEYFRRKPTEIKNVKL 692 Query: 364 GDRVEGKIKSITDFGIFIGL-----DGGIDGLVHLSDISWNVAGEEAVREYKKGDEI--- 415 G + + I D + ++ +S+ + + G A G I Sbjct: 693 GQVLRAYCVGMVPNEKKICFRLALKDYHRNVVLKMSEFADSKEGVSAE----VGQVILVK 748 Query: 416 --------AAVVLQVDAERERI-----------------SLGVKQLAEDPFNNWVALNKK 450 V+L V + E + + + A Sbjct: 749 VVKKVNKEDGVLLVVSPKLEDVCTNGVEDPIRYLQTYLCDVKELVKRFKSHDKAFAQYSV 808 Query: 451 GAIVTGKVTAVDAKG--ATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGV 508 G VT V + V L D VE A + + S GD +E + V Sbjct: 809 GQSVTCVVESFIPDSDQMVVRLGD-VEDTTGAKGIATKDPKRDAESYSPGDLLEGRVVWV 867 Query: 509 DRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMA 548 D + + + + V K + + +D N S + Sbjct: 868 DVEKKLVRVCV-------VKKYLKHLVNADDENVSKELLG 900 >UniRef50_Q7PQF3 AGAP003595-PA n=1 Tax=Anopheles gambiae RepID=Q7PQF3_ANOGA Length = 1472 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 84/577 (14%), Positives = 181/577 (31%), Gaps = 67/577 (11%) Query: 2 TESFAQLFEESLKE---------IETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQ 52 +S ++ EE L++ + R G ++ G V I +L+ + + Sbjct: 57 MQSEKEMEEEQLQQCFKGSNLVFGKVRAGMLLLGCVKQIRATELLISLPGRLNGIVQITN 116 Query: 53 FKNAQGE-----------------LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAW 95 A + VGD V + + + L+ + +K H + Sbjct: 117 ISEAYSKRLEHMYNTRSTDCPTLGDLYTVGDLVYMKVLRKVKDRRQVYLTLDPSKLHSDF 176 Query: 96 ITLEKAYEDAETVTGVINGKVKGGFTVELN--GIRAFLPGSLVDVRPVRDTLHLEGKELE 153 + + + I K G+T+++ +RAFLP ++ + G+ L Sbjct: 177 KPAQ--LVEGLVLAATITVKEDHGYTMDIGVHNVRAFLPQEHLNGNRDDE-----GRNLF 229 Query: 154 FKVIKLDQKRNNVVVSRRA--VIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL 211 + + Q + VV +A E + +E + G ++ V +YG L Sbjct: 230 CSIHSVTQSGSGAVVVLKAFRPDEPRVLNVEEVAVETIVPGCQLTFTVGEPVEYGLRGML 289 Query: 212 --GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVA 269 + ++ + +V E ++ + +L V + L+ + Sbjct: 290 FEDSITAYVNRNMLT--KVTSNPEKYSMFKTLPATLLYVMPVTNEVFVSLRP-YPNNRAD 346 Query: 270 IAKRYPEGTKLT-GRVTNLTDYGCFVEIEEGVEGLVH---VSEMDWTNKNIHPSK----- 320 + + G+ + RV + G ++E L+ + + + + Sbjct: 347 CGQAHMVGSIVEKARVKSTDGGGVWLEFGNKCRALLPMGVIRKTAEAAAGGNVDESVMLS 406 Query: 321 VVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIF 380 VG V V+ D + A Q + G + ++ + G Sbjct: 407 NFQVGTTHRVGVVYFDPLESTYIVSNSPDHAETMIQDSFDVEIGKTYKCRVLQLLSTGAL 466 Query: 381 IGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEI--AAVVLQVDAE-----RERISLGV 433 +G+ + G+V + K D + AV +D + + + L Sbjct: 467 VGVGR-VTGIV-------KYEFFNRDSKLKVRDVVPMRAVCRGLDNDFLMFTNQPMLLNE 518 Query: 434 KQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATL 493 K ++ +K G V+ + V + + G + AS + E Sbjct: 519 KAPILMHWSQLDRN-RKDQKFVGAVSQIQKSYVWVRFFNNLSGRINASVTVAGQDEAEVA 577 Query: 494 VLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDA 530 L G D I L+++ + + A Sbjct: 578 KLRQGSIRLFTVLDFDEGANIIDLALKQTSDQPVRTA 614 Score = 81.9 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 74/578 (12%), Positives = 162/578 (28%), Gaps = 85/578 (14%) Query: 20 PGSIV-RGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE------------IQVGD 66 GSIV + V + D V ++ G K + +P + QVG Sbjct: 353 VGSIVEKARVKSTDGGGVWLEFGNKCRALLPMGVIRKTAEAAAGGNVDESVMLSNFQVGT 412 Query: 67 EVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNG 126 V + + ++S E +T + + G V + Sbjct: 413 THRVGVVYFDPLESTYIVSNSPDHAETMIQDSFD-VEIGKTYKCRVLQLLSTGALVGVGR 471 Query: 127 IRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLL 186 + + + + + LD + E L Sbjct: 472 VTGIVKYEFFNRDSKLKVRDVV--PMRAVCRGLDNDFLMFTNQPMLLNEKAPILMHWSQL 529 Query: 187 ENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKV 245 + ++ + G V + +V + G ++ + + + + G V Sbjct: 530 DRNRKDQKFVGAVSQIQKSYVWVRFFNNLSGRINASVTVAGQDEAEVAKLRQGSIRLFTV 589 Query: 246 LKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVH 305 L FD + L LKQ + P V+ + G V E G +G + Sbjct: 590 LDFDEGANIIDLALKQTSDQPVRTA-------QLARVTVSYVHATGAEVLTENGEQGTIP 642 Query: 306 VSEMDWTNKNIHP-SKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKG 364 ++ +++ G+ + + + E L + + NP ++ G Sbjct: 643 AECFSEFGEHNSLYMRLLRGGETLTA--VKTNPETYSARLT-QYYQENPIS--LQSVRAG 697 Query: 365 DRVEGKIKSITDFGIFIGLDGGIDGLVHLS-DISWNVAGEEAVREYKKGDEIAAVVLQVD 423 ++G ++ L G +S W+ + G I V ++ Sbjct: 698 MVLKGSCVTVNGKPYVTPLLSDFHGRFPVSIPPKWHKIED--------GSIIKLRVAHLN 749 Query: 424 AE-RERISLGVKQLAED------------------------------PFNNWVALNKKGA 452 + + +K E ++ A G Sbjct: 750 PTPTKGLLPAMKVETEMVEVCEDIFTEIGSFMGEYLQDVNRLIERFRELDHTFAHYSIGD 809 Query: 453 IVTGKVTAVDAKGATVELADGVEGYLRASEASRDRV------EDATLVLSVGDEVEAKFT 506 V + + A+ + + V+ + ++ + E VG +V + Sbjct: 810 RVECVIESTVAECNKMAVE--VQAVGKRAKYPTKGIVTTVLPERPASSYKVGQQVPGRIV 867 Query: 507 GVDRKNRAISL-------SVRAKDEADEKDAIATVNKQ 537 +D + + + + S + DE++ V +Q Sbjct: 868 WIDVERKLVHVCVDEPLFSRIVLQQEDEEEPDMDVQRQ 905 >UniRef50_UPI000186CABA programmed cell death protein, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186CABA Length = 1410 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 85/536 (15%), Positives = 173/536 (32%), Gaps = 51/536 (9%) Query: 11 ESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGE----------- 59 E L + G I+ G+V + +V V I Sbjct: 55 EELNASLVQEGMILLGIVSDVSDKIVNVSLPGSLRGVITIPNVSEFYTSLIQNMSSQSEV 114 Query: 60 ----LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGK 115 Q GD + V + +V + +++ + + A + +TG + K Sbjct: 115 LGLTEIFQPGDILPVKILSVSEESKSLMVTSDPKMINSNLSY--DAIDKDLILTGNVKSK 172 Query: 116 VKGGFTVE--LNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKL--DQKRNNVVVSRR 171 GF ++ ++ + FL + D G+ + VI +V +S Sbjct: 173 EDHGFIIDFGIDKVLGFLKF----DKVKEDGELKVGQIIRSSVISCLKSPGSCSVQLSTL 228 Query: 172 AVIESEN--SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG---VDGLLHITDMAWK 226 + L L G + + +V + G V G G ++ ++ K Sbjct: 229 KTDFEKAYIKLNSSVSLSFLVPGFQFQVVVTKVLLNGVEVKYGNDVNKKGFIYEDNLPMK 288 Query: 227 RVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTN 286 E VNVG E +L + P I + G ++G+V Sbjct: 289 FPN--LEKVNVGTEYIATLLYVKPLVNVLYF-----KVLPKKKIEWPFKFGDIVSGKVVK 341 Query: 287 LTDYGCFVEIEEGV---EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDI-----DEE 338 G V+I +G+ + +S++ K + K + V + I + Sbjct: 342 ARRSGLVVKIVKGINVARCFIPISKLKNNKKILENDKSIETLYPVNKKIPQIRLGSRNYM 401 Query: 339 RRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISW 398 +R+ + G+ + KI S + + + + + I G V +D++ Sbjct: 402 KRQYLGATDKASLQEKYFSVTDLKCGEIISAKILSFSKYSVKLKIGQSILGTVAFNDLTD 461 Query: 399 NVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVA-LNKKGAIVTGK 457 V + +K G ++ +++ E + + L +K N + +K G Sbjct: 462 -VPLKNPSLRFKVGQQVT----EINPESKFVRLTMKPSLIKEKNILMDLNFEKNHFYLGV 516 Query: 458 VTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNR 513 ++ V V+ +GV G L + + G ++ V +N+ Sbjct: 517 ISRVLHGKLIVKFFNGVIGILPKRFTNHLDGGSLKTYFAEGHLIKCCPINVTSENK 572 Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 75/510 (14%), Positives = 166/510 (32%), Gaps = 50/510 (9%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAG-LKSESAIPAEQFKNAQGE 59 M S ++ +L I+ G V + + ++D G K + ++ + + Sbjct: 142 MVTSDPKMINSNLSYDAIDKDLILTGNVKSKEDHGFIIDFGIDKVLGFLKFDKV---KED 198 Query: 60 LEIQVGDEVDVALDA--VEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTG-----VI 112 E++VG + ++ + G LS K +A+I L + + V G V+ Sbjct: 199 GELKVGQIIRSSVISCLKSPGSCSVQLSTLKTDFEKAYIKLNSSVSLSFLVPGFQFQVVV 258 Query: 113 NGKVKGGFTVELN---GIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVS 169 + G V+ + F+ + ++ G E ++ + + V V Sbjct: 259 TKVLLNGVEVKYGNDVNKKGFIYEDNLPMKFPNLEKVNVGTEYIATLLYV---KPLVNVL 315 Query: 170 RRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGV---DGLLHITDMAW 225 V+ + + G V G V G V + G+ + I+ + Sbjct: 316 YFKVLPKKKIEWPFKF------GDIVSGKVVKARRSGLVVKIVKGINVARCFIPISKLKN 369 Query: 226 KR-----VKHPSEIVNVGDEI-TVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTK 279 + K + V +I +++ + + + + G Sbjct: 370 NKKILENDKSIETLYPVNKKIPQIRLGSRNYMKRQYLGATDKASLQEKYFSVTDLKCGEI 429 Query: 280 LTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEER 339 ++ ++ + + Y ++I + + G V +++ +PS VG V +I+ E Sbjct: 430 ISAKILSFSKYSVKLKIGQSILGTVAFNDLTD-VPLKNPSLRFKVGQQVT----EINPES 484 Query: 340 RRISLGLKQ-CKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISW 398 + + L +K K G I + + + G+ G++ + Sbjct: 485 KFVRLTMKPSLIKEKNILMDLNFEKNHFYLGVISRVLHGKLIVKFFNGVIGILPKR-FTN 543 Query: 399 NVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKV 458 ++ G + +G I + V +E + L+ L K G V Sbjct: 544 HLDGGSLKTYFAEGHLIKCCPINVTSENKL------LLSLLSSTEGSDLLKVGKKYNVTV 597 Query: 459 TAVDAKGATVELADGV----EGYLRASEAS 484 G +++ +GYL S Sbjct: 598 VNKTENGFLLDVQVNKKKTCQGYLPKQLLS 627 Score = 87.3 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 60/380 (15%), Positives = 130/380 (34%), Gaps = 51/380 (13%) Query: 135 LVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGME 194 L+ + + + H + +E++ + ++ + + + V E +QEGM Sbjct: 16 LIKTKWMEEKNHFQEEEIKLHLTNREKIHHLFHLEVKYVEELNA--------SLVQEGMI 67 Query: 195 VKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKR------------VKHPSEIVNVGDEI 241 + GIV +++D V L G + G++ I +++ V +EI GD + Sbjct: 68 LLGIVSDVSDKIVNVSLPGSLRGVITIPNVSEFYTSLIQNMSSQSEVLGLTEIFQPGDIL 127 Query: 242 TVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE-EGV 300 VK+L E + + + LTG V + D+G ++ + V Sbjct: 128 PVKILSVSEESKSLMVT-SDPKMINSNLSYDAIDKDLILTGNVKSKEDHGFIIDFGIDKV 186 Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERR--RISLGLKQCKANPWQQFA 358 G + + + VG ++ V+ + + L + Sbjct: 187 LGFL-------KFDKVKEDGELKVGQIIRSSVISCLKSPGSCSVQLSTLKTDFEKAYIKL 239 Query: 359 E------THNKGDRVEGKIKSITDFGIFIGLDGGI--DGLVHLSDISWNVAGEEAVREYK 410 G + + + + G+ + + G ++ ++ + + Sbjct: 240 NSSVSLSFLVPGFQFQVVVTKVLLNGVEVKYGNDVNKKGFIYEDNLPMKFPN---LEKVN 296 Query: 411 KGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVEL 470 G E A +L V + + V P K G IV+GKV G V++ Sbjct: 297 VGTEYIATLLYV-----KPLVNVLYFKVLPKKKIEWPFKFGDIVSGKVVKARRSGLVVKI 351 Query: 471 ADGVE---GYLRASEASRDR 487 G+ ++ S+ ++ Sbjct: 352 VKGINVARCFIPISKLKNNK 371 Score = 71.5 bits (174), Expect = 8e-11, Method: Composition-based stats. Identities = 86/604 (14%), Positives = 191/604 (31%), Gaps = 94/604 (15%) Query: 6 AQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---AQGELEI 62 A L E+ + + G I+ +++ K V + G + + L Sbjct: 412 ASLQEKYFSVTDLKCGEIISAKILSFSKYSVKLKIGQSILGTVAFNDLTDVPLKNPSLRF 471 Query: 63 QVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTV 122 +VG + + + L+ + + E I ++ +E GVI+ + G V Sbjct: 472 KVGQQ----VTEINPESKFVRLTMKPSLIKEKNILMDLNFEKNHFYLGVISRVLHGKLIV 527 Query: 123 EL-NGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 + NG+ LP R T HL+G L+ + + + + Sbjct: 528 KFFNGVIGILPK--------RFTNHLDGGSLKTYFAEGHLIKCCPINVTSENKLLLSLLS 579 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEI 241 + + L+ G + V N T+ G + D ++ + P ++++V + Sbjct: 580 STEGSDLLKVGKKYNVTVVNKTENGFLL-----DVQVNKKKTCQGYL--PKQLLSVHQNL 632 Query: 242 TVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPE-GTKLTGR----------VTNLTDY 290 T +L + S E + I + G+ V ++ + Sbjct: 633 TTPLLSTYFPNEKFSAYCVFASETNGLPIMGTLEIFQSLYEGKTEEDFKSLLAVNSVLPF 692 Query: 291 GCFVEIEEGVEGLVHV---SEMDWTNKN--IHPSKVVNVG--DVVEVMVLDIDEERRRIS 343 + + +H EM++ + K + ++ ++ I + + +S Sbjct: 693 LYKNQSLKTNRKFLHNLIPGEMNFFVRVTCEDFPKEFKLNKYQLLYGKIMKIVDHKMDVS 752 Query: 344 L-------------------------GLKQCKANPWQQFAETHNKGDRVEGKIKSITDFG 378 + L + + ++E G V GKI+ I Sbjct: 753 IRVSDVWNKDFDSSLEFLDSYLFTMKTLVERQKKHLNAYSENAEFGRFVTGKIEEIRTKH 812 Query: 379 IFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAE 438 + + G GLV +++K D++ + +D + I + + Sbjct: 813 AIVKTEDGDLGLV--------------EGKFEKNDQVKGHICWIDGPEQMIYI---HALK 855 Query: 439 DPFNNWVALNKKG-AIVTGKVTAVDAKGATVELADGVEG----YLRASEASRDRVEDATL 493 N + + + K+ + +L G + + +++ + Sbjct: 856 SVKKNVKEVYEPNWDKLHAKIVHCNENVIVAKLKGKGIGKFAYLPQKRHVNDLMLKECS- 914 Query: 494 VLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKA 553 SVG+EV T KN L++ K+ + N + S ++ + Sbjct: 915 -FSVGEEVVVWVT---TKNSKFLLAL-DARIVARKEKLFLKNSSQKLKESILSLKRKLEI 969 Query: 554 AKGE 557 K E Sbjct: 970 EKIE 973 >UniRef50_A8NFZ6 S1 RNA binding domain containing protein n=1 Tax=Brugia malayi RepID=A8NFZ6_BRUMA Length = 1795 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 84/555 (15%), Positives = 183/555 (32%), Gaps = 50/555 (9%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELE 61 E + LK + PG+++ + V V+ G + + + Sbjct: 234 MECLDXAVVKKLKLNDLMPGTLLLVNPLQPTHSGVYVNIGNDIKGYVSRQHLPPRYRNDP 293 Query: 62 IQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYED---AETVTGVINGKVKG 118 + + + L+ + + +E+ + + ++ K Sbjct: 294 YKCLKSFKTIVMFCQQNSNLLTLNGHPDIIAVSKLVKRTNFENXHIGDIIECRVSSVDKN 353 Query: 119 GFTVELNGI-----RAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAV 173 G V + + + + + + +G + +V+ ++V Sbjct: 354 G-NVNFDLVHEDERNSLVAAFARKTKLKDSVEYKKGTVHQARVLSFKMVERILIV----A 408 Query: 174 IESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPS 232 + A++ +++ G++V ++++ D G FV + + G + ++ K + Sbjct: 409 TQKNILAQKMVSIKDAVPGVKVTAKIESVLDKGLFVKIYNSIPGFIPKIHLSDKLITRIE 468 Query: 233 EIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGT---KLTGRVTN-LT 288 + VGDE+ +VL ++ + R+ L KQ I K Y E T TG + + + Sbjct: 469 KHFVVGDELNCRVLNVNKLKERLILTNKQSLISSKDTIIKNYAEVTTNVITTGYIISQHS 528 Query: 289 DYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQ 348 G + G G + + + V VG V V V+ +D +R+R+ + L Sbjct: 529 SGGLVIGFYGGTCGFM------FPKEAERLGTNVKVGLTVRVRVVSVDPQRKRLLVALAN 582 Query: 349 CKANPWQQFAETHNKGDR-----VEGKIKSITDFG----------IFI----GLDGGIDG 389 DR + +++ G + + L G + Sbjct: 583 TTNGGTGIARAQPFLMDRENPLSFSAVVVNVSSNGDNLTRNEVLNVSVRLGKKLGGKVKA 642 Query: 390 LVHLSDISW--NVAGEEAVREYKKGDEI-AAVVLQVDAERERI---SLGVKQLAEDPFNN 443 + +S ++ G + VL A ++ + L + Sbjct: 643 FIPKELLSDYLDLPFHSLNESIAPGSVLPKVTVLGDIAGNLKVTSKRFIIDWLEKHARIT 702 Query: 444 WVALNKKGAIVTG-KVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVE 502 + KG +V G + G VELA G A + + L +G V Sbjct: 703 GIQDLTKGDLVCGNIIQKHKEMGYFVELAGGSALTGPARFIRPMMLPVSMQELQIGQTVV 762 Query: 503 AKFTGVDRKNRAISL 517 A+ + VD + + +L Sbjct: 763 ARVSSVDLERKRFAL 777 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 84/550 (15%), Positives = 179/550 (32%), Gaps = 56/550 (10%) Query: 10 EESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQF----------KNAQGE 59 + + G + GVV+ I + +L++ +P + F + E Sbjct: 47 NQRITPNFLTEGMLGLGVVMKIREAEILLECSDGVVVKVPVQNFGSLMLETLRNSSITLE 106 Query: 60 LEIQVGDEVDVALDA------VEDGFGETLLSREKAKRHEAWITLEK-AYEDAETVTGVI 112 +VG + + + + L A D + GV+ Sbjct: 107 DVFRVGQMLAFKVIKGRETHDTQKKRKKASYPIVSCDPLIVNFHLNPGALIDGLVLNGVV 166 Query: 113 NGKVKGGFTVELN----GIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVV 168 G ++L ++ FL + ++G+ L ++ V Sbjct: 167 GSVEDKGVIIDLGLQSVELKGFLAERHL-PSTFPKESLIKGQPLLLRIQNESSSNKKARV 225 Query: 169 SRRAVIESEN----SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDM 223 + + + + L +L G + T G +V++G + G + + Sbjct: 226 ISLSAVPEMECLDXAVVKKLKLNDLMPGTLLLVNPLQPTHSGVYVNIGNDIKGYVSRQHL 285 Query: 224 AWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLG----LKQLGEDPWVAIAKRYPEGTK 279 + P + + I V+ + ++L + + + + G Sbjct: 286 PPRYRNDPYKCLKSFKTI---VMFCQQNSNLLTLNGHPDIIAVSKLVKRTNFENXHIGDI 342 Query: 280 LTGRVTNLTDYGCFVEIEEGVEGLVH----VSEMDWTNKNIHPSKVV--NVGDVVEVMVL 333 + RV+++ G V + LVH S + + V G V + VL Sbjct: 343 IECRVSSVDKNG-NVNFD-----LVHEDERNSLVAAFARKTKLKDSVEYKKGTVHQARVL 396 Query: 334 DIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHL 393 R + + ++ + G +V KI+S+ D G+F+ + I G + Sbjct: 397 SFKMVERILIVATQKNILAQKMVSIKDAVPGVKVTAKIESVLDKGLFVKIYNSIPGFIPK 456 Query: 394 SDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKK--- 450 +S + + + GDE+ VL V+ +ER+ L KQ + + + Sbjct: 457 IHLSDKLIT-RIEKHFVVGDELNCRVLNVNKLKERLILTNKQSLISSKDTIIKNYAEVTT 515 Query: 451 GAIVTG-KVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVD 509 I TG ++ + G + G G+ E + VG V + VD Sbjct: 516 NVITTGYIISQHSSGGLVIGFYGGTCGF-----MFPKEAERLGTNVKVGLTVRVRVVSVD 570 Query: 510 RKNRAISLSV 519 + + + +++ Sbjct: 571 PQRKRLLVAL 580 Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats. Identities = 77/492 (15%), Positives = 165/492 (33%), Gaps = 41/492 (8%) Query: 73 DAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL--NGIRAF 130 E + ++ + + + I + G V++ + Sbjct: 34 IKNEQKSEYVGVWNQRITPNFLTEGMLGLGVVMKIREAEILLECSDGVVVKVPVQNFGSL 93 Query: 131 LPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLEN-- 188 + +L + + + G+ L FKVIK + + ++A + Sbjct: 94 MLETLRNSSITLEDVFRVGQMLAFKVIKGRETHDTQKKRKKASYPIVSCDPLIVNFHLNP 153 Query: 189 --LQEGMEVKGIVKNLTDYGAFVDLG----GVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 L +G+ + G+V ++ D G +DLG + G L + P E + G + Sbjct: 154 GALIDGLVLNGVVGSVEDKGVIIDLGLQSVELKGFLAERHLPSTF---PKESLIKGQPLL 210 Query: 243 VKVLKFDRERTR---VSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTD-----YGCFV 294 +++ + +SL E A+ K+ + G + + G +V Sbjct: 211 LRIQNESSSNKKARVISLSAVPEMECLDXAVVKKLKLNDLMPGTLLLVNPLQPTHSGVYV 270 Query: 295 EIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLG----LKQCK 350 I ++G V + +N + +V+ + ++L + Sbjct: 271 NIGNDIKGYVSRQHLPPRYRN----DPYKCLKSFKTIVMFCQQNSNLLTLNGHPDIIAVS 326 Query: 351 ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVH----LSDISWNVAGEEAV 406 + E + GD +E ++ S+ G + D LVH S ++ + Sbjct: 327 KLVKRTNFENXHIGDIIECRVSSVDKNG-NVNFD-----LVHEDERNSLVAAFARKTKLK 380 Query: 407 R--EYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAK 464 EYKKG A VL + + ++ + G VT K+ +V K Sbjct: 381 DSVEYKKGTVHQARVLSFKMVERILIVATQKNILAQKMVSIKDAVPGVKVTAKIESVLDK 440 Query: 465 GATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDE 524 G V++ + + G++ S + VGDE+ + V++ + L+ + Sbjct: 441 GLFVKIYNSIPGFIPKIHLSDKLITRIEKHFVVGDELNCRVLNVNKLKERLILTNKQSLI 500 Query: 525 ADEKDAIATVNK 536 + + I + Sbjct: 501 SSKDTIIKNYAE 512 Score = 118 bits (295), Expect = 8e-25, Method: Composition-based stats. Identities = 82/538 (15%), Positives = 180/538 (33%), Gaps = 72/538 (13%) Query: 14 KEIETRPGSIVRGVVVAIDKDVVLVDAGLKSE--------SAIPAEQFKNAQGELEIQVG 65 G I+ V ++DK+ V+ L E + + K++ +E + G Sbjct: 333 NFENXHIGDIIECRVSSVDKNG-NVNFDLVHEDERNSLVAAFARKTKLKDS---VEYKKG 388 Query: 66 DEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL- 124 + + + +++ +K + ++++ A VT I + G V++ Sbjct: 389 TVHQARVLSFKMVERILIVATQKNILAQKMVSIKDAV-PGVKVTAKIESVLDKGLFVKIY 447 Query: 125 NGIRAFLPGSLVDVRPVRDTLH--LEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 N I F+P + + + + G EL +V+ +++ + ++++ + + S Sbjct: 448 NSIPGFIPKIHLSDKLITRIEKHFVVGDELNCRVLNVNKLKERLILTNKQSLISSKD-TI 506 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVD--LGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240 + + + G + + G V GG G + + + V VG Sbjct: 507 IKNYAEVTTNVITTGYIISQHSSGGLVIGFYGGTCGFMFPKE-----AERLGTNVKVGLT 561 Query: 241 ITVKVLKFDRERTRVSLGLKQLG-----EDPWVAIAKRYPEGTKLTGRVTNLTDYGCFV- 294 + V+V+ D +R R+ + L + V N++ G + Sbjct: 562 VRVRVVSVDPQRKRLLVALANTTNGGTGIARAQPFLMDRENPLSFSAVVVNVSSNGDNLT 621 Query: 295 -------------EIEEGVEGLVHVSEMDW--TNKNIHPSKVVNVGDVV-EVMVLDIDEE 338 ++ V+ + + ++ + G V+ +V VL Sbjct: 622 RNEVLNVSVRLGKKLGGKVKAFIPKELLSDYLDLPFHSLNESIAPGSVLPKVTVLGDIAG 681 Query: 339 RRRI---SLGLKQCKANPWQQFAETHNKGDRVEGKIKSI-TDFGIFIGLDGGIDGLVHLS 394 ++ + + + + KGD V G I + G F+ L GG L + Sbjct: 682 NLKVTSKRFIIDWLEKHARITGIQDLTKGDLVCGNIIQKHKEMGYFVELAGG-SALTGPA 740 Query: 395 DISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIV 454 + +++E + G + A V VD ER+R +L + P I Sbjct: 741 RFIRPMMLPVSMQELQIGQTVVARVSSVDLERKRFALILDTHLCVPPGAKPDYFAPSMIH 800 Query: 455 TGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKN 512 V ++ +A+ + V +G+ + K V +N Sbjct: 801 Y-TVEELNWF-----IANN---------------ASNSQVPKIGECIHVKVIEVSERN 837 Score = 92.7 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 67/458 (14%), Positives = 141/458 (30%), Gaps = 73/458 (15%) Query: 8 LFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA---QGELEIQV 64 L ++ + + PG V + ++ + V IP + + E V Sbjct: 414 LAQKMVSIKDAVPGVKVTAKIESVLDKGLFVKIYNSIPGFIPKIHLSDKLITRIEKHFVV 473 Query: 65 GDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGV---INGKVKGGFT 121 GDE++ + V +L+ +++ ++ E V I+ GG Sbjct: 474 GDELNCRVLNVNKLKERLILTNKQSLISSKDTIIKNYAEVTTNVITTGYIISQHSSGGLV 533 Query: 122 VEL-NGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIE--SEN 178 + G F+ R + G + +V+ +D +R ++V+ + Sbjct: 534 IGFYGGTCGFM-FPKEAERLGTNVK--VGLTVRVRVVSVDPQRKRLLVALANTTNGGTGI 590 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYG--------AFVDL-------GGVDGLLH---I 220 + + L++ + +V N++ G V + G V + + Sbjct: 591 ARAQPFLMDRENP-LSFSAVVVNVSSNGDNLTRNEVLNVSVRLGKKLGGKVKAFIPKELL 649 Query: 221 TDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQ-----LGEDPWVAIAKRYP 275 +D +E + G + KV + + K+ L + + + Sbjct: 650 SDYLDLPFHSLNESIAPGSVLP-KVTVLGDIAGNLKVTSKRFIIDWLEKHARITGIQDLT 708 Query: 276 EGTKLTGRVTNLTDY-GCFVEIEEGVEGLVHVSEMDWTNKNIHP------SKVVNVGDVV 328 +G + G + G FVE+ G S + + I P + + +G V Sbjct: 709 KGDLVCGNIIQKHKEMGYFVELAGG-------SALTGPARFIRPMMLPVSMQELQIGQTV 761 Query: 329 EVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGID 388 V +D ER+R +L L P + ++ + F Sbjct: 762 VARVSSVDLERKRFALILDTHLCVPPGAKPDYFAPSMIHY-TVEELNWFIA--------- 811 Query: 389 GLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAER 426 + K G+ I V++V Sbjct: 812 ------------NNASNSQVPKIGECIHVKVIEVSERN 837 Score = 76.2 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 84/609 (13%), Positives = 187/609 (30%), Gaps = 88/609 (14%) Query: 18 TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVED 77 + G + V+ + + V+V G + + +Q G + ++ Sbjct: 820 PKIGECIHVKVIEVSERNVVVQHGDNTN-----LKGCTINSTNILQKGSYAKALVLDIKL 874 Query: 78 GFGETLLSR-EKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN-GIRAFL---- 131 E +L + +H L+ + + K + AF+ Sbjct: 875 PTCELVLFLLDDGVQHLDEKKLQSLLCSKXELDAKVWLYKKEYAVATVETEKSAFVVYIP 934 Query: 132 ----PGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRA---VIESENSAERDQ 184 P V+ + K++ + + R + + + Sbjct: 935 TRIHPNINVNTISANLDESNNQYTITPKLVAGNIMIGIAMEMLRKYGLIRKKVKVPVKPA 994 Query: 185 LLENLQEGMEVKGIVKNL-TDYGAF--VDL---GGVDGLLHITDMAWKRVKHPSEIV--- 235 + + L++ V + T + V+L G G LH ++ + S+ V Sbjct: 995 VKKKLKQFKIYAAKVXGMWTKDDLYSAVELEFPDGSIGRLHASEFDQSFLNQTSQPVQSF 1054 Query: 236 ---NVGDEITVKVL---KFDRERTRVSLG------------------LKQLGEDPWVAIA 271 G + VK++ K ++ ++ L L + W Sbjct: 1055 LRKKKGKTVNVKIMCFTKLKQKMEKLDLSKPKGKGVQKSEKMVVVTRLAECTMKTWKLNE 1114 Query: 272 KRYPE-----------GTKLTGRVTNLTDYGCF-VEIEEGVEGLVHVSEMDWTNKNIHPS 319 + + G+ + V G VE+ G++ + N +P+ Sbjct: 1115 TKRKQSLLGYPQSYVHGSLIPVFVCKGPHVGVVKVEVSPLWNGVIRKQNLYDENLMTNPA 1174 Query: 320 KV--------VNVGDVVEVMVLDIDEERRRISLGLKQ-CKANPWQQFAETHNKGDRVEGK 370 G+ + ++ ++ + + + C +Q + GDRV G+ Sbjct: 1175 NDASALIDIDFEPGEKLIAQIIGVNVYKNKRGKSRHRKCLEMTLKQTRKAFESGDRVTGR 1234 Query: 371 IKSIT--DFGIFIGLDGGIDGLVHLSDISWNVAGEE-AVREYKKGDEIAAVVLQVDAERE 427 + IT I + L ++ L+ I N ++ Y+ +L D+++ Sbjct: 1235 VVGITQSPSSIILELTNNQRAILTLTGIMGNYLKAHEVIKTYELNQIYNVELLNFDSDKG 1294 Query: 428 RISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAK-GATVELADGVEGYLRASEASRD 486 R + +E + G+ + VT+ VE++ G+ G + Sbjct: 1295 RWLAVTESRSESTLYRNGTDIEIGSELQAFVTSTSDDAHVFVEVSPGISGCV-------- 1346 Query: 487 RVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNA 546 V+ L L D ++ + V L V + E K+ + S+NA Sbjct: 1347 -VKSKKLSLKPDDLIKVRVNHVFPDGG---LKVDFVNLIAESSTDEKPRKRLRSIASDNA 1402 Query: 547 MAEAFKAAK 555 + K ++ Sbjct: 1403 IDLPRKKSR 1411 >UniRef50_UPI0001BC83D1 30S ribosomal protein S1 n=1 Tax=Bacteroides sp. D2 RepID=UPI0001BC83D1 Length = 844 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 89/489 (18%), Positives = 187/489 (38%), Gaps = 31/489 (6%) Query: 67 EVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNG 126 EV ++ + + A + + + GV+ + G V++NG Sbjct: 331 EVICYCLRIDTES----------SLTSTYREISLALDSKDKMQGVVTKLREDGLKVDVNG 380 Query: 127 IRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLL 186 + F+ + + D +++ ++I ++ +V + + S + + Sbjct: 381 VEGFVQIRNLSASKISDIRKYFKEKMLIELIPIEIGSTGIVEF---TLINTCSDPNNLIN 437 Query: 187 ENLQEGMEVKGIVKNLTDYGAFVDLGG--VDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 N + G + VK D D+G ++G+ D+ + R + +G E Sbjct: 438 ANFEIGRTISAKVKYCDDDFVKFDVGHEKIEGISFRKDLTYSRFSLLHKQYELGTEHDFI 497 Query: 245 VLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLV 304 V D E + L LKQL + PW ++ + +++ V +Y E++EG+EG++ Sbjct: 498 VKNNDFENNTIYLRLKQLKD-PWDSLT--IRKFSQVNFLVCRKVNYAFIGELQEGIEGIL 554 Query: 305 HVSEMDW-TNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNK 363 E+ W +++ + + + V+ +V DID+E+R I L LK + NP+ ++ +T N+ Sbjct: 555 AYKELSWFSSEIEVIKNSIKLNNNVDCVVKDIDKEKRIIYLTLKDRQNNPYFEYLDT-NR 613 Query: 364 GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVD 423 VE T +GI ++ + ++ SWN K G + V+ ++ Sbjct: 614 NKVVEFFAIEETIYGILGSIESKYQVFIPKNEQSWNGDKYN----CKIGKKNKVVIKELS 669 Query: 424 AERERISLGVKQLAEDPFNNWVALNKKGAIVTG-KVTAVDAKGA--TVELA-DGVEGYLR 479 + + + L P + G I+ KV GA + + E L Sbjct: 670 NRGDSLIGTFRPLIPHPLALFSNKFDVGQILKPLKVLNTYNWGATFIISIGHKKFEALLF 729 Query: 480 ASEASRD-RVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEA--DEKDAIATVNK 536 + S ++ + D++ +D + LS++ + N+ Sbjct: 730 KGDISNLCFIKSCIGIFDNIDKIPLAIKEIDLDKNRVILSLKEVLKNNLQRSRECKYANE 789 Query: 537 QEDANFSNN 545 E +N Sbjct: 790 YESIIIGSN 798 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 62/349 (17%), Positives = 135/349 (38%), Gaps = 11/349 (3%) Query: 162 KRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHIT 221 R + R ES ++ ++ L +++G+V L + G VD+ GV+G + I Sbjct: 329 NREVICYCLRIDTESSLTSTYREISLALDSKDKMQGVVTKLREDGLKVDVNGVEGFVQIR 388 Query: 222 DMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLT 281 +++ ++ + I + ++ V L DP I + G ++ Sbjct: 389 NLSASKISDIRKYFKEKMLIELIPIEI-GSTGIVEFTLINTCSDPNNLINANFEIGRTIS 447 Query: 282 GRVTNLTDYGCFVEIE-EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERR 340 +V D ++ E +EG+ ++ ++ ++ K +G + +V + D E Sbjct: 448 AKVKYCDDDFVKFDVGHEKIEGISFRKDLTYSRFSL-LHKQYELGTEHDFIVKNNDFENN 506 Query: 341 RISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISW-N 399 I L LKQ K + T K +V + ++ L GI+G++ ++SW + Sbjct: 507 TIYLRLKQLKD---PWDSLTIRKFSQVNFLVCRKVNYAFIGELQEGIEGILAYKELSWFS 563 Query: 400 VAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVT 459 E K + + VV +D E+ I L +K +P+ ++ + +V Sbjct: 564 SEIEVIKNSIKLNNNVDCVVKDIDKEKRIIYLTLKDRQNNPYFEYLDT-NRNKVVEFFAI 622 Query: 460 AVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGV 508 G + + ++ +E S + + +G + + + Sbjct: 623 EETIYGILGSIESKYQVFIPKNEQSWNGDKY---NCKIGKKNKVVIKEL 668 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 66/470 (14%), Positives = 161/470 (34%), Gaps = 39/470 (8%) Query: 22 SIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK---NAQGELEIQVGDEVDVALDAVEDG 78 ++GVV + +D + VD E + + + ++ L +E G Sbjct: 360 DKMQGVVTKLREDGLKVDVNG-VEGFVQIRNLSASKISDIRKYFKEKMLIE--LIPIEIG 416 Query: 79 FGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELN--GIRAFLPGSLV 136 + + + +E T++ + ++ I + Sbjct: 417 STGIVEFTLINTCSDPNNLINANFEIGRTISAKVKYCDDDFVKFDVGHEKIEGISFRKDL 476 Query: 137 DVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGME 194 G E +F V D + N + + + + + +S + + Sbjct: 477 TYSRFSLLHKQYELGTEHDFIVKNNDFENNTIYLRLKQLKDPWDSLTIRKF-------SQ 529 Query: 195 VKGIVKNLTDYGAFVDL-GGVDGLLHITDMAW--KRVKHPSEIVNVGDEITVKVLKFDRE 251 V +V +Y +L G++G+L +++W ++ + + + + V D+E Sbjct: 530 VNFLVCRKVNYAFIGELQEGIEGILAYKELSWFSSEIEVIKNSIKLNNNVDCVVKDIDKE 589 Query: 252 RTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDW 311 + + L LK +P+ + T YG IE + + +E W Sbjct: 590 KRIIYLTLKDRQNNPYFEYLDT-NRNKVVEFFAIEETIYGILGSIESKYQVFIPKNEQSW 648 Query: 312 TNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEG-K 370 + +G +V++ ++ + + +P F+ + G ++ K Sbjct: 649 NGDKYN----CKIGKKNKVVIKELSNRGDSLIGTFRPLIPHPLALFSNKFDVGQILKPLK 704 Query: 371 IKSITDFGI--FIGLD-GGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERE 427 + + ++G I + + L+ DIS + + + D+I + ++D ++ Sbjct: 705 VLNTYNWGATFIISIGHKKFEALLFKGDISNLCFIKSCIGIFDNIDKIPLAIKEIDLDKN 764 Query: 428 RISLGVKQLAED--------PFNNWVALNKKGAIVTGKVTAVDAKGATVE 469 R+ L +K++ ++ + N G+ G V + G +E Sbjct: 765 RVILSLKEVLKNNLQRSRECKYANEYESIIIGSNNQGYVVLLK--GLWIE 812 Score = 87.7 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 60/389 (15%), Positives = 124/389 (31%), Gaps = 31/389 (7%) Query: 13 LKEIETRPGSIVRGVVVAIDKDVVLVDAGL-KSESAIPAEQFKNAQ---GELEIQVGDEV 68 L G + V D D V D G K E + ++ + ++G E Sbjct: 435 LINANFEIGRTISAKVKYCDDDFVKFDVGHEKIEGISFRKDLTYSRFSLLHKQYELGTEH 494 Query: 69 DVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL-NGI 127 D + + L ++ K +T+ K + V ++ KV F EL GI Sbjct: 495 DFIVKNNDFENNTIYLRLKQLKDPWDSLTIRKFSQ----VNFLVCRKVNYAFIGELQEGI 550 Query: 128 RAFLPGSLVDVRPVR----DTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERD 183 L + ++ V +D+++ + ++ + + D Sbjct: 551 EGILAYKELSWFSSEIEVIKNSIKLNNNVDCVVKDIDKEKRIIYLTLKDRQNNPYFEYLD 610 Query: 184 QLLENLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSEIV--NVGDE 240 V+ T YG + + + +W + +G + Sbjct: 611 TNRNK-----VVEFFAIEETIYGILGSIESKYQVFIPKNEQSWN-----GDKYNCKIGKK 660 Query: 241 ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTG-RVTNLTDYGC--FVEIE 297 V + + + + L P + ++ G L +V N ++G + I Sbjct: 661 NKVVIKELSNRGDSLIGTFRPLIPHPLALFSNKFDVGQILKPLKVLNTYNWGATFIISIG 720 Query: 298 EGV-EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQ 356 E L+ ++ + + D + + + +ID ++ R+ L LK+ N Q Sbjct: 721 HKKFEALLFKGDISNLCFIKSCIGIFDNIDKIPLAIKEIDLDKNRVILSLKEVLKN-NLQ 779 Query: 357 FAETHNKGDRVEGKIKSITDFGIFIGLDG 385 + + E I + G + L G Sbjct: 780 RSRECKYANEYESIIIGSNNQGYVVLLKG 808 Score = 41.9 bits (97), Expect = 0.074, Method: Composition-based stats. Identities = 29/213 (13%), Positives = 73/213 (34%), Gaps = 18/213 (8%) Query: 12 SLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVA 71 + ++T +V + +L K + IP + + ++G + V Sbjct: 605 YFEYLDTNRNKVVEFFAIEETIYGILGSIESKYQVFIPKNEQSWNGDKYNCKIGKKNKVV 664 Query: 72 LDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTG-VINGKVKGGFTVEL----NG 126 + + + G++L+ + ++ + + + G T + Sbjct: 665 IKELSN-RGDSLIGTFRPLIPHPLALFSNKFDVGQILKPLKVLNTYNWGATFIISIGHKK 723 Query: 127 IRAFLPGSLVDVRPVRDTLHLEG-----KELEFKVIKLDQKRNNVVVSRRAVIESENSAE 181 A L D+ + G ++ + ++D +N V++S + V+++ Sbjct: 724 FEALL--FKGDISNLCFIKSCIGIFDNIDKIPLAIKEIDLDKNRVILSLKEVLKNNLQRS 781 Query: 182 RDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGV 214 R+ N E + I+ + G V L G+ Sbjct: 782 RECKYAN-----EYESIIIGSNNQGYVVLLKGL 809 >UniRef50_UPI0001925B6F PREDICTED: similar to predicted protein n=2 Tax=Hydra magnipapillata RepID=UPI0001925B6F Length = 783 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 97/513 (18%), Positives = 181/513 (35%), Gaps = 56/513 (10%) Query: 58 GELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVK 117 + +++VGDE + + ++ EK ++ + G + Sbjct: 231 VDHDLEVGDECQLIVVDIDLSKKLFYGFGEKNAIAAYLNKKTAKFKPDVKMKGTVVYANS 290 Query: 118 GGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESE 177 V + + L + + + V L++ V+V Sbjct: 291 FLIAVVIADMNFTLAYAFPKMHLNDVLKQPVPIQSVVAVTYLERVDGKVLVKLVYGDNE- 349 Query: 178 NSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL--GGVDGLLHITDMAW--KRVKHPSE 233 N G V +VK + V L G ++G +HI+++ ++ K P + Sbjct: 350 ---------SNPALGSLVSAVVKGIKPAQLSVTLMNGRLNGRIHISNIHDTIEQGKSPLK 400 Query: 234 IVNVGDEITVKVLKF--------------DRERTRVSLGLKQL----GEDPWVAIAKRYP 275 + KV+ F + R+ V L LK E ++ Sbjct: 401 AFKPLQVVEAKVIGFRDLRTHNYLPISHTNISRSMVELSLKPSVLTSQETETEKKINQFS 460 Query: 276 EGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSK-VVNVGDVVEVMVLD 334 G + G V ++T ++ + V+G V V + +++ K V VG +L Sbjct: 461 IGEVVNGFVASVTKKSLWISVNPLVKGKVSVLNISENIMDLNKWKSVFKVGLGYSFRILS 520 Query: 335 IDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDF-GIFIGLDGGIDGLVHL 393 E+ L L + + KG + GKI + G+ I L G G+ H+ Sbjct: 521 CKED----FLELTRLGED------LNVAKGVVINGKISKVLKNAGLLIELSNGKAGVAHI 570 Query: 394 SDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDP----------FNN 443 +++S + E + + + VL + + + I L ++Q + + N Sbjct: 571 TELSDHF-EESPLNGFAVDQFVRCKVLAI-KKNDEIDLSLRQSRINEGQANAGEWDRYIN 628 Query: 444 WVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEA 503 K+G I+ G V + G V L+ + G ++ S+ V+D + VG V+A Sbjct: 629 GYDDIKEGDILRGYVKSCSKIGVFVSLSQTINGRVQIKNLSQYFVKDFESLFHVGKLVKA 688 Query: 504 KFTGVDRKNRAISLSVRAKDEADEKDAIATVNK 536 K +D I LS+R KD D A K Sbjct: 689 KVIHIDPTTNHIDLSLRGKDVNDVDPAPPPKRK 721 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 46/264 (17%), Positives = 100/264 (37%), Gaps = 16/264 (6%) Query: 7 QLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGD 66 Q E K + G +V G V ++ K + + + + +L Sbjct: 448 QETETEKKINQFSIGEVVNGFVASVTKKSLWISVNPLVKGKVSVLNISENIMDLNKWK-- 505 Query: 67 EVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG-GFTVEL- 124 ++ V G+ +LS ++ + + + G I+ +K G +EL Sbjct: 506 ----SVFKVGLGYSFRILSCKEDFLELTRLGEDLNVAKGVVINGKISKVLKNAGLLIELS 561 Query: 125 NGIRAFLPGSLVDVRPVRDTLHL--EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 NG + + L+ + + KV+ + + + R++ I + Sbjct: 562 NGKAGVAHITELSDHFEESPLNGFAVDQFVRCKVLAIKKNDEIDLSLRQSRINEGQANAG 621 Query: 183 DQ-----LLENLQEGMEVKGIVKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKHPSEIVN 236 + ++++EG ++G VK+ + G FV L ++G + I +++ VK + + Sbjct: 622 EWDRYINGYDDIKEGDILRGYVKSCSKIGVFVSLSQTINGRVQIKNLSQYFVKDFESLFH 681 Query: 237 VGDEITVKVLKFDRERTRVSLGLK 260 VG + KV+ D + L L+ Sbjct: 682 VGKLVKAKVIHIDPTTNHIDLSLR 705 Score = 71.9 bits (175), Expect = 5e-11, Method: Composition-based stats. Identities = 54/336 (16%), Positives = 104/336 (30%), Gaps = 45/336 (13%) Query: 199 VKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVS-L 257 V ++ V +H + V + VGDE + V+ D + Sbjct: 203 VSTISKEEVLVTYHD----IHSELLLKGVVSSVDHDLEVGDECQLIVVDIDLSKKLFYGF 258 Query: 258 GLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIH 317 G K ++ K+ G V + V I + L + +H Sbjct: 259 GEKNAIAAYLNKKTAKFKPDVKMKGTVVYANSFLIAVVIADMNFTL------AYAFPKMH 312 Query: 318 PSKVVNVGDVVE----VMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKS 373 + V+ V V V ++ ++ + L G V +K Sbjct: 313 LNDVLK--QPVPIQSVVAVTYLERVDGKVLVKLVYGDNESNPA------LGSLVSAVVKG 364 Query: 374 ITDFGIFIGLDGG-IDGLVHLSDISWNVA-GEEAVREYKKGDEIAAVVLQV--------- 422 I + + L G ++G +H+S+I + G+ ++ +K + A V+ Sbjct: 365 IKPAQLSVTLMNGRLNGRIHISNIHDTIEQGKSPLKAFKPLQVVEAKVIGFRDLRTHNYL 424 Query: 423 -----DAERERISLGVKQ----LAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADG 473 + R + L +K E + G +V G V +V K + + Sbjct: 425 PISHTNISRSMVELSLKPSVLTSQETETEKKINQFSIGEVVNGFVASVTKKSLWISVNPL 484 Query: 474 VEGYLRASEASRD--RVEDATLVLSVGDEVEAKFTG 507 V+G + S + + V VG + Sbjct: 485 VKGKVSVLNISENIMDLNKWKSVFKVGLGYSFRILS 520 Score = 63.1 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 39/273 (14%), Positives = 89/273 (32%), Gaps = 34/273 (12%) Query: 304 VHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRR-ISLGLKQCKANPWQQFAETHN 362 +H SE+ + VGD +++V+DID ++ G K A + Sbjct: 218 IH-SELLLKGVVSSVDHDLEVGDECQLIVVDIDLSKKLFYGFGEKNAIAAYLNKKTAKFK 276 Query: 363 KGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIA--AVVL 420 +++G + F I + + +++ K+ I V Sbjct: 277 PDVKMKGTVVYANSFLIAVVIAD------MNFTLAYAFPKMHLNDVLKQPVPIQSVVAVT 330 Query: 421 QVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADG-VEGYLR 479 ++ ++ + + + + + G++V+ V + +V L +G + G + Sbjct: 331 YLERVDGKVLVKL------VYGDNESNPALGSLVSAVVKGIKPAQLSVTLMNGRLNGRIH 384 Query: 480 ASEASR--DRVEDATLVLSVGDEVEAKFTGV--------------DRKNRAISLSVRA-K 522 S ++ + VEAK G + + LS++ Sbjct: 385 ISNIHDTIEQGKSPLKAFKPLQVVEAKVIGFRDLRTHNYLPISHTNISRSMVELSLKPSV 444 Query: 523 DEADEKDAIATVNKQEDANFSNNAMAEAFKAAK 555 + E + +N+ N +A K + Sbjct: 445 LTSQETETEKKINQFSIGEVVNGFVASVTKKSL 477 Score = 48.8 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 26/91 (28%), Gaps = 3/91 (3%) Query: 16 IETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK---NAQGELEIQVGDEVDVAL 72 + + G I+RG V + K V V + + E VG V + Sbjct: 631 DDIKEGDILRGYVKSCSKIGVFVSLSQTINGRVQIKNLSQYFVKDFESLFHVGKLVKAKV 690 Query: 73 DAVEDGFGETLLSREKAKRHEAWITLEKAYE 103 ++ LS ++ + Sbjct: 691 IHIDPTTNHIDLSLRGKDVNDVDPAPPPKRK 721 >UniRef50_Q7XYL3 Ribosomal protein rpS1 n=1 Tax=Bigelowiella natans RepID=Q7XYL3_BIGNA Length = 419 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 70/282 (24%), Positives = 126/282 (44%), Gaps = 14/282 (4%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDV-VLVDAGLKSESAIPAEQFK--NAQGE 59 + F L EE K + V G V+++D VD G KS + +P + + E Sbjct: 114 KDFDNLLEE-NKLPSFDALTTVTGTVISLDSKGGAYVDVGAKSLAYLPRGEISMGGMKAE 172 Query: 60 LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGG 119 + G + D + + +LS ++ AW + + E T++G I +GG Sbjct: 173 DVLFPGLKRDFTVSKASTMASDVVLSIKRMLIPTAWTRVRQMAELDVTLSGKILSHNRGG 232 Query: 120 FTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENS 179 F +E++ ++ FLP S + +D + GK + K +++D + +V+S R + S Sbjct: 233 FIIEVDSLQGFLPFSQMATSVDKD--EMIGKVIPVKFLEVDMENQRLVMSNRRAVASSFK 290 Query: 180 AERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGD 239 + V L YGAF++LGGV+GLLHI+ ++ V ++++VG Sbjct: 291 KNYKVGDVVVG-------TVTALKPYGAFINLGGVNGLLHISQISHDHVTSVKDVMDVGQ 343 Query: 240 EITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLT 281 ++ V ++ D + RVSL K+L + + K Sbjct: 344 KLKVMIMSRD-QNGRVSLSTKRLEPNAGDMLRSPQLVFEKAE 384 Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats. Identities = 61/274 (22%), Positives = 107/274 (39%), Gaps = 15/274 (5%) Query: 278 TKLTGRVTNL-TDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDID 336 T +TG V +L + G +V++ + E+ + V+ G + V Sbjct: 132 TTVTGTVISLDSKGGAYVDVGAKSLAYLPRGEISMG--GMKAEDVLFPGLKRDFTVSKAS 189 Query: 337 EERRRISLGLKQCK-ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSD 395 + L +K+ W + + + GKI S G I +D + G + S Sbjct: 190 TMASDVVLSIKRMLIPTAWTRVRQMAELDVTLSGKILSHNRGGFIIEVD-SLQGFLPFSQ 248 Query: 396 ISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVT 455 ++ +V +E G I L+VD E +R+ + ++ +++ K G +V Sbjct: 249 MATSVDKDEM-----IGKVIPVKFLEVDMENQRLVMSNRRAV---ASSFKKNYKVGDVVV 300 Query: 456 GKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAI 515 G VTA+ GA + L GV G L S+ S D V V+ VG +++ D +N + Sbjct: 301 GTVTALKPYGAFINLG-GVNGLLHISQISHDHVTSVKDVMDVGQKLKVMIMSRD-QNGRV 358 Query: 516 SLSVRAKDEADEKDAIATVNKQEDANFSNNAMAE 549 SLS + + + E A E Sbjct: 359 SLSTKRLEPNAGDMLRSPQLVFEKAEEMAARFKE 392 Score = 108 bits (271), Expect = 5e-22, Method: Composition-based stats. Identities = 74/326 (22%), Positives = 136/326 (41%), Gaps = 25/326 (7%) Query: 49 PAEQFKNAQGELEIQ--VGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAE 106 P E+ + +I+ V DE + A L ++ E +++ Sbjct: 78 PQEEAIDKPMYDQIRKLVNDE---EIMAEIPESDVMGLYKDFDNLLE--ENKLPSFDALT 132 Query: 107 TVTGVING-KVKGGFTVELN-GIRAFLPGSLVDVR--PVRDTLHLEGKELEFKVIKLDQK 162 TVTG + KGG V++ A+LP + + D L G + +F V K Sbjct: 133 TVTGTVISLDSKGGAYVDVGAKSLAYLPRGEISMGGMKAEDVL-FPGLKRDFTVSKASTM 191 Query: 163 RNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITD 222 ++VV+S + ++ + R + + L + G + + G +++ + G L + Sbjct: 192 ASDVVLSIKRMLI-PTAWTRVRQMAELDV--TLSGKILSHNRGGFIIEVDSLQGFLPFSQ 248 Query: 223 MAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTG 282 MA K +G I VK L+ D E R+ + ++ + K Y G + G Sbjct: 249 MATSVDKDEM----IGKVIPVKFLEVDMENQRLVMSNRRAV---ASSFKKNYKVGDVVVG 301 Query: 283 RVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRI 342 VT L YG F+ + GV GL+H+S++ + V++VG ++VM++ D + R+ Sbjct: 302 TVTALKPYGAFINLG-GVNGLLHISQISHDH-VTSVKDVMDVGQKLKVMIMSRD-QNGRV 358 Query: 343 SLGLKQCKANPWQQFAETHNKGDRVE 368 SL K+ + N ++ E Sbjct: 359 SLSTKRLEPNAGDMLRSPQLVFEKAE 384 >UniRef50_B4QT45 GD18300 n=5 Tax=Drosophila RepID=B4QT45_DROSI Length = 1128 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 77/536 (14%), Positives = 167/536 (31%), Gaps = 43/536 (8%) Query: 6 AQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVG 65 E+L + +V GVV + L + ++A+ + + QVG Sbjct: 59 EAFSAETLNMDTLQEDMLVMGVVKELTAT-ALHYCLARPDAAMSGDTSEYHDLTELFQVG 117 Query: 66 DEVDVALDAVED-GFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVE- 123 V E G L K+ + +G + ++ G+ +E Sbjct: 118 RIVYGKAIKTEKLDTGRVSLLLSLKPADVHGSLHHKSIKKGFIFSGAVAEALEHGYVIES 177 Query: 124 -LNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAER 182 + G++AF+P +P + + L+ K + D ++ + + ++ Sbjct: 178 GVQGLQAFVPCE----KPAQKLHVGQLAFLKVKTVHHDTHQSTCTCVQVEQDQLRIKSQN 233 Query: 183 DQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 + L+ + G V+ V G + ++ + + + ++ Sbjct: 234 ETNLDYILPGSIVRFKVAKHLKDGLKGSIMNESFSAYVNEHHLANALDTLDAYELNEDYN 293 Query: 243 VKVLKFDRERTRVSLGL---------KQLGEDPWVAIAKRYPEGTKLT-GRVTNLTDYGC 292 +VL V L L +D + G+ + +V L G Sbjct: 294 ARVLYVMPLTKLVYLTLNLDIKTGAAVAKDDDEEEQEVEPIQVGSVVEKAKVLRLGSGGV 353 Query: 293 FVEIEEGVEGLVHVSEMDWTNKNIHPSKVV--NVG--DVVEVMVLDIDEERRRISLGLKQ 348 + + + ++G++ + K + V G +V +L D Sbjct: 354 VLLLNKKLKGIISYGSIRGNFKGNYDKDEVLSKYGRKTKHKVRILGYDVIESLYYCSDDP 413 Query: 349 CKANPWQQFAETHNKGDRVEG--KIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAV 406 N E N GD V K G + + G ++G++ ++ Sbjct: 414 NVVNEKLFCLEDINAGDLVTAKIFKKDDKIKGWSVRI-GKVNGILEQFYLA-------PN 465 Query: 407 REYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALN---KKGAIVTGKVTAVDA 463 Y G + VL+V+AER+ + + + G + G V + Sbjct: 466 VRYDVGQSLKCRVLEVNAERKICYVSNRAEYLGKGMKILTDYASAHVGNVYMGTVVRCED 525 Query: 464 KGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSV 519 V+ +G++G L G + + ++ I+L++ Sbjct: 526 TYVLVKFGNGIKGVLHRQNL------KENSSFFEGQTTKFRILTRNKD--QITLTL 573 Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats. Identities = 78/552 (14%), Positives = 169/552 (30%), Gaps = 81/552 (14%) Query: 18 TRPGSIVRGVVVAIDKDVVLVDA-GLKSESAIPAEQFKNA-QGELEIQVGDEVDVALDAV 75 PGSIVR V KD + + + NA ++ ++ + + V Sbjct: 240 ILPGSIVRFKVAKHLKDGLKGSIMNESFSAYVNEHHLANALDTLDAYELNEDYNARVLYV 299 Query: 76 EDGFGETLLSREKAKRHEA---------WITLEKAYEDAETVTGVINGKVKGGFTVELNG 126 L+ + A +E + + GG + LN Sbjct: 300 MPLTKLVYLTLNLDIKTGAAVAKDDDEEEQEVEPIQVGSVVEKAKVLRLGSGGVVLLLNK 359 Query: 127 -IRAFLPGSLV------DVRPVRDTLHLEGKE-LEFKVIKLDQKRNNVVVSRRAVIESEN 178 ++ + + + K + +++ D + S + +E Sbjct: 360 KLKGIISYGSIRGNFKGNYDKDEVLSKYGRKTKHKVRILGYDVIESLYYCSDDPNVVNEK 419 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDY--GAFVDLGGVDGLLHITDMAWKRVKHPSEIVN 236 LE++ G V + D G V +G V+G+L + P+ + Sbjct: 420 LFC----LEDINAGDLVTAKIFKKDDKIKGWSVRIGKVNGIL------EQFYLAPNVRYD 469 Query: 237 VGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRY---PEGTKLTGRVTNLTDYGCF 293 VG + +VL+ + ER + + + I Y G G V D Sbjct: 470 VGQSLKCRVLEVNAERKICYVSNRAEYLGKGMKILTDYASAHVGNVYMGTVVRCEDTYVL 529 Query: 294 VEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP 353 V+ G++G++H + + G + +L +++ +I+L L + K Sbjct: 530 VKFGNGIKGVLHRQNL-------KENSSFFEGQTTKFRILTRNKD--QITLTLPEDK--- 577 Query: 354 WQQFAETHNKGDRVEGKIKSITDFGIFIGL----------------DGGIDGLVHLSDIS 397 G+ +I + D G+ + + GL+ L +S Sbjct: 578 -------FQLGEICPVEITNALDAGLEVKITFAAEDDEEDEDGNPKLEEFVGLIPLRLLS 630 Query: 398 WNVAGEEAVREYKK-GDEIAAVVLQVDAERERISLGVKQLAED--PFNNWVALNKKGAIV 454 ++ A G A + + ++ + + G I+ Sbjct: 631 DHLELLHAQMRVHPAGSYTDAACIMQN------IFSLRDVPYFSGQLTKDWQSVQVGDII 684 Query: 455 TGKVTAVDAKGA--TVELAD-GVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRK 511 V + V + + + + V++A + L + K + + Sbjct: 685 RSYVKHATDQVVDLMVCVRNYNKPVKVHVKMLRLNAVKNAPVELVPEQLLWVKVLSKEVE 744 Query: 512 NRAISLSVRAKD 523 + +++S + D Sbjct: 745 TKTLTVSAKLTD 756 Score = 88.5 bits (218), Expect = 7e-16, Method: Composition-based stats. Identities = 79/529 (14%), Positives = 165/529 (31%), Gaps = 84/529 (15%) Query: 18 TRPGSIV-RGVVVAIDKDVVLVDAGLKSESAIPAEQFK------NAQGELEIQVG--DEV 68 + GS+V + V+ + V++ K + I + + E+ + G + Sbjct: 334 IQVGSVVEKAKVLRLGSGGVVLLLNKKLKGIISYGSIRGNFKGNYDKDEVLSKYGRKTKH 393 Query: 69 DVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETV-TGVINGKVKGGFTVELNGI 127 V + + S + +E LE G++V + + Sbjct: 394 KVRILGYDVIESLYYCSDDPNVVNEKLFCLEDINAGDLVTAKIFKKDDKIKGWSVRIGKV 453 Query: 128 RAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLE 187 L + + + G+ L+ +V++++ +R VS RA + Sbjct: 454 NGILEQFYLAP----NVRYDVGQSLKCRVLEVNAERKICYVSNRAEYLGKGMKIL-TDYA 508 Query: 188 NLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVL 246 + G G V D V G G+ G+LH ++ + G ++L Sbjct: 509 SAHVGNVYMGTVVRCEDTYVLVKFGNGIKGVLHRQNL------KENSSFFEGQTTKFRIL 562 Query: 247 KFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI---------- 296 +++ +++L L ++ G +TN D G V+I Sbjct: 563 TRNKD--QITLTL----------PEDKFQLGEICPVEITNALDAGLEVKITFAAEDDEED 610 Query: 297 ---EEGVE---GLVHVSEMDWTNKNIHPSKVVNV-GDVVEVMVLDIDEERRRISLGLKQC 349 +E GL+ + + + +H V+ G + + + SL Sbjct: 611 EDGNPKLEEFVGLIPLRLLSDHLELLHAQMRVHPAGSYTDAACI----MQNIFSLRDVPY 666 Query: 350 KANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDG-----GIDGLVHLSDISWNVAGEE 404 + + ++ GD + +K TD + L VH+ + N Sbjct: 667 FSGQLTKDWQSVQVGDIIRSYVKHATDQ--VVDLMVCVRNYNKPVKVHVKMLRLNAVKNA 724 Query: 405 AVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAK 464 V + VL + E + +++ K + +V G + V Sbjct: 725 PVELV-PEQLLWVKVLSKEVETKTLTVSAKLTDVWSGDLSDTA----KLVEGYLNEVA-- 777 Query: 465 GATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNR 513 ++ G+E SVG+++ F G+D Sbjct: 778 ----QIKAGLE-----------EASAPISKYSVGEKINVVFKGIDATTN 811 Score = 74.2 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 58/426 (13%), Positives = 134/426 (31%), Gaps = 45/426 (10%) Query: 148 EGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGA 207 G+ + K IK ++ V + +++++G G V ++G Sbjct: 116 VGRIVYGKAIKTEKLDTGRVSLL--LSLKPADVHGSLHHKSIKKGFIFSGAVAEALEHGY 173 Query: 208 FVD--LGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGED 265 ++ + G+ + + P++ ++VG +KV + + + Q+ +D Sbjct: 174 VIESGVQGLQAFVPC--------EKPAQKLHVGQLAFLKVKTVHHDTHQSTCTCVQVEQD 225 Query: 266 PWVAIAKRYP------EGTKLTGRVTNLTDYGCFVEIEE-GVEGLVHVSEMDWTNKNIHP 318 ++ G+ + +V G I V+ + + Sbjct: 226 QLRIKSQNETNLDYILPGSIVRFKVAKHLKDGLKGSIMNESFSAYVNEHHLANA---LDT 282 Query: 319 SKVVNVGDVVEVMVLDIDEERRRISLGLK---------QCKANPWQQFAETHNKGDRVE- 368 + + VL + + + L L + +Q E G VE Sbjct: 283 LDAYELNEDYNARVLYVMPLTKLVYLTLNLDIKTGAAVAKDDDEEEQEVEPIQVGSVVEK 342 Query: 369 GKIKSITDFGIFIGLDGGIDGLVH----LSDISWNVAGEEAVREYKKGDEIAAVVLQVDA 424 K+ + G+ + L+ + G++ + N +E + +Y + + +L D Sbjct: 343 AKVLRLGSGGVVLLLNKKLKGIISYGSIRGNFKGNYDKDEVLSKYGRKTKHKVRILGYDV 402 Query: 425 ERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAK--GATVELADGVEGYLRASE 482 + + G +VT K+ D K G +V + V G L Sbjct: 403 IESLYYCSDDPNVVNEKLFCLEDINAGDLVTAKIFKKDDKIKGWSVRIG-KVNGILEQFY 461 Query: 483 ASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANF 542 + + VG ++ + V+ + + +S RA+ + N Sbjct: 462 LA------PNVRYDVGQSLKCRVLEVNAERKICYVSNRAEYLGKGMKILTDYASAHVGNV 515 Query: 543 SNNAMA 548 + Sbjct: 516 YMGTVV 521 Score = 61.5 bits (148), Expect = 8e-08, Method: Composition-based stats. Identities = 57/435 (13%), Positives = 125/435 (28%), Gaps = 58/435 (13%) Query: 10 EESLKEIETRPGSIVRGVVVAIDKD--VVLVDAGLKSESAIPAEQFKNAQGELEIQVGDE 67 E+ + G +V + D V G K + + + VG Sbjct: 418 EKLFCLEDINAGDLVTAKIFKKDDKIKGWSVRIG-KVNGIL---EQFYLAPNVRYDVGQS 473 Query: 68 VDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDA--ETVTGVINGKVKGGFTVEL- 124 + + V +S + L G + V+ Sbjct: 474 LKCRVLEVNAERKICYVSNRAEYLGKGMKILTDYASAHVGNVYMGTVVRCEDTYVLVKFG 533 Query: 125 NGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQ 184 NGI+ L + ++ EG+ +F+++ ++ + + + + Sbjct: 534 NGIKGVLHRQNLK----ENSSFFEGQTTKFRILTRNKDQITLTLPEDK--FQLGEICPVE 587 Query: 185 LLENLQEGMEVKGIVKNLTDYGAFV---DLGGVDGLLHITDMAW--KRVKHPSEIVNVGD 239 + L G+EVK D L GL+ + ++ + + + G Sbjct: 588 ITNALDAGLEVKITFAAEDDEEDEDGNPKLEEFVGLIPLRLLSDHLELLHAQMRVHPAGS 647 Query: 240 EITVKVLKFDRERTRVSLGLKQLGEDPWVAI--AKRYPEGTKLTGRVTNLTDYGCFVEIE 297 + + L+ + + G + V + TD V++ Sbjct: 648 YTDAACIMQN------IFSLRDVPYFSGQLTKDWQSVQVGDIIRSYVKHATDQ--VVDLM 699 Query: 298 E-----GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN 352 VHV + P ++V ++ V VL + E + +++ K Sbjct: 700 VCVRNYNKPVKVHVKMLRLNAVKNAPVELVPE-QLLWVKVLSKEVETKTLTVSAKLTD-- 756 Query: 353 PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKG 412 + + VEG + + + G++ + +Y G Sbjct: 757 --VWSGDLSDTAKLVEGYLNEVAQ------IKAGLE------------EASAPISKYSVG 796 Query: 413 DEIAAVVLQVDAERE 427 ++I V +DA Sbjct: 797 EKINVVFKGIDATTN 811 >UniRef50_UPI00018545D5 30S ribosomal protein S1 n=2 Tax=Helicobacter pylori RepID=UPI00018545D5 Length = 283 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 69/255 (27%), Positives = 136/255 (53%), Gaps = 9/255 (3%) Query: 21 GSIVRGVVVAIDKD--VVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDG 78 G+I G++V+I+++ +V G K+E + + + +G+L Q D + V + E G Sbjct: 34 GTIKEGLIVSINENDGYAMVSVGGKTEGRLALSEITDEKGQLLYQKNDPIIVHV--SEKG 91 Query: 79 FGETLLSREKAKRHEAWITLEKAYED--AETVTGVINGKVKGGFTVELNGIRAFLPGSLV 136 ++ ++ + + +E+ E+ + G I GK KGG+ VE G+ FL S Sbjct: 92 EHPSVSYKKAISQQKIQAKIEELGENYENAIIEGKIVGKNKGGYIVESQGVEYFLSRSHS 151 Query: 137 DVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVK 196 ++ + GK ++ +I++D++ +++ +SR+ E + + + E L+ V Sbjct: 152 SLKNDAN---HIGKRIKACIIRVDKENHSINISRKRFFEVNDKRQLEVSKELLEATEPVL 208 Query: 197 GIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVS 256 G+V+ +T +G FV+ G++GL+H ++++ K +P + GDE+ VK + +D E+ R+S Sbjct: 209 GVVRQITPFGIFVEAKGIEGLVHYSEISHKGPVNPEKYYKEGDEVYVKAIAYDAEKRRLS 268 Query: 257 LGLKQLGEDPWVAIA 271 L +K EDPW I Sbjct: 269 LSIKATIEDPWEEIQ 283 Score = 121 bits (303), Expect = 9e-26, Method: Composition-based stats. Identities = 56/264 (21%), Positives = 98/264 (37%), Gaps = 25/264 (9%) Query: 277 GTKLTGRVTNLT--DYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLD 334 GT G + ++ D V + EG + +SE+ + + D + ++ Sbjct: 34 GTIKEGLIVSINENDGYAMVSVGGKTEGRLALSEITDEKGQL----LYQKNDPI---IVH 86 Query: 335 IDEERRRISLG----LKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGL 390 + E+ S+ + Q K + + + +EGKI G + G++ Sbjct: 87 VSEKGEHPSVSYKKAISQQKIQAKIEELGENYENAIIEGKIVGKNKGGYIVE-SQGVEYF 145 Query: 391 VHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQ----LAEDPFNNWVA 446 + S S G I A +++VD E I++ K+ + Sbjct: 146 LSRSHSSLK------NDANHIGKRIKACIIRVDKENHSINISRKRFFEVNDKRQLEVSKE 199 Query: 447 LNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFT 506 L + V G V + G VE A G+EG + SE S + GDEV K Sbjct: 200 LLEATEPVLGVVRQITPFGIFVE-AKGIEGLVHYSEISHKGPVNPEKYYKEGDEVYVKAI 258 Query: 507 GVDRKNRAISLSVRAKDEADEKDA 530 D + R +SLS++A E ++ Sbjct: 259 AYDAEKRRLSLSIKATIEDPWEEI 282 Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 54/248 (21%), Positives = 102/248 (41%), Gaps = 16/248 (6%) Query: 113 NGKVKGGFTVELNG-IRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRR 171 + G V + G L S + + ++ + ++ + +K + VS + Sbjct: 44 INENDGYAMVSVGGKTEGRLALSEITDEKGQLLY----QKNDPIIVHVSEKGEHPSVSYK 99 Query: 172 AVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHP 231 I + + + L E ++G + G V+ GV+ L + + K + Sbjct: 100 KAISQQKIQAKIEELGENYENAIIEGKIVGKNKGGYIVESQGVEYFLSRSHSSLKNDAN- 158 Query: 232 SEIVNVGDEITVKVLKFDRERTRVSLGLKQLGE----DPWVAIAKRYPEGTKLTGRVTNL 287 ++G I +++ D+E +++ K+ E + + G V + Sbjct: 159 ----HIGKRIKACIIRVDKENHSINISRKRFFEVNDKRQLEVSKELLEATEPVLGVVRQI 214 Query: 288 TDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLK 347 T +G FVE +G+EGLVH SE+ +P K GD V V + D E+RR+SL +K Sbjct: 215 TPFGIFVE-AKGIEGLVHYSEISHKGPV-NPEKYYKEGDEVYVKAIAYDAEKRRLSLSIK 272 Query: 348 QCKANPWQ 355 +PW+ Sbjct: 273 ATIEDPWE 280 Score = 53.8 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 45/185 (24%), Positives = 80/185 (43%), Gaps = 19/185 (10%) Query: 364 GDRVEGKIKSIT--DFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQ 421 G EG I SI D + + G +G + LS+I+ E+ Y+K D I ++ Sbjct: 34 GTIKEGLIVSINENDGYAMVSVGGKTEGRLALSEITD----EKGQLLYQKNDPI---IVH 86 Query: 422 VDAERERISLGVKQLAEDPFNNWV----ALNKKGAIVTGKVTAVDAKGATVELADGVEGY 477 V + E S+ K+ N + AI+ GK+ + G VE + GVE + Sbjct: 87 VSEKGEHPSVSYKKAISQQKIQAKIEELGENYENAIIEGKIVGKNKGGYIVE-SQGVEYF 145 Query: 478 LRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQ 537 L S +S + +G ++A VD++N +I++S + E ++K + + Sbjct: 146 LSRSHSSLKNDAN-----HIGKRIKACIIRVDKENHSINISRKRFFEVNDKRQLEVSKEL 200 Query: 538 EDANF 542 +A Sbjct: 201 LEATE 205 >UniRef50_Q10MB3 30S ribosomal protein S1, chloroplast, putative, expressed n=1 Tax=Oryza sativa Japonica Group RepID=Q10MB3_ORYSJ Length = 380 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 71/283 (25%), Positives = 116/283 (40%), Gaps = 38/283 (13%) Query: 3 ESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK----NAQG 58 E E +I+T GS+++G V + VD KS + +P ++ N Sbjct: 74 EDLDSAVES--TDIDTDIGSLIKGTVFMTTSNGAYVDIQSKSTAFLPLDEACLLDVNHIE 131 Query: 59 ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 E I+ G + + G +LS + ++ AW + + VTG + G KG Sbjct: 132 EAGIRAGLVEEFMIIDENPGDETLILSLQAIQQDLAWERCRQLQAEDVVVTGKVIGGNKG 191 Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 G + G++ F+P S V + + L KEL K +++D+++ +V+S R + Sbjct: 192 GVVALVEGLKGFVPFSQVSSKSTAE--ELLDKELPLKFVEVDEEQGRLVLSNRKAMADSQ 249 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVG 238 + L G V G V++L YGAF+D+ ++ G Sbjct: 250 A--------QLGIGSVVLGTVESLKPYGAFIDI----------------------VLQPG 279 Query: 239 DEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLT 281 D + V +L DRER RVSL K+L P I K Sbjct: 280 DTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAD 322 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 53/273 (19%), Positives = 101/273 (36%), Gaps = 34/273 (12%) Query: 276 EGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDI 335 G+ + G V T G +V+I+ + + E + N + G V E M++D Sbjct: 89 IGSLIKGTVFMTTSNGAYVDIQSKSTAFLPLDEACLLDVNHIEEAGIRAGLVEEFMIIDE 148 Query: 336 DEERRRISLGLKQCKAN-PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLS 394 + + L L+ + + W++ + + V GK+ G+ + L G+ G V S Sbjct: 149 NPGDETLILSLQAIQQDLAWERCRQLQAEDVVVTGKVIGGNKGGV-VALVEGLKGFVPFS 207 Query: 395 DISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIV 454 +S EE + E+ ++VD E+ R+ L ++ + A G++V Sbjct: 208 QVSSKSTAEELLD-----KELPLKFVEVDEEQGRLVLSNRKA----MADSQAQLGIGSVV 258 Query: 455 TGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRA 514 G V ++ GA +++ VL GD ++ DR+ Sbjct: 259 LGTVESLKPYGAFIDI-----------------------VLQPGDTLKVMILSHDRERGR 295 Query: 515 ISLSVRAKDEADEKDAIATVNKQEDANFSNNAM 547 +SLS + + E A+ Sbjct: 296 VSLSTKKLEPTPGDMIRNPKLVFEKADEMAQIF 328 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 54/263 (20%), Positives = 99/263 (37%), Gaps = 37/263 (14%) Query: 188 NLQEGMEVKGIVKNLTDYGAFVDLGGV-DGLLHITDMAWKRVKHPSEI-VNVGDEITVKV 245 + G +KG V T GA+VD+ L + + V H E + G + Sbjct: 86 DTDIGSLIKGTVFMTTSNGAYVDIQSKSTAFLPLDEACLLDVNHIEEAGIRAGLVEEFMI 145 Query: 246 LKFDRERTRVSLGLKQLGED-PWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLV 304 + + + L L+ + +D W + E +TG+V G V + EG++G V Sbjct: 146 IDENPGDETLILSLQAIQQDLAWERCRQLQAEDVVVTGKVIGGNKGGV-VALVEGLKGFV 204 Query: 305 HVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKG 364 S++ + + + +++DEE+ R+ L ++ A+ G Sbjct: 205 PFSQVSSKSTAEELLD-----KELPLKFVEVDEEQGRLVLSNRKAMADSQA----QLGIG 255 Query: 365 DRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDA 424 V G ++S+ +G FI + + GD + ++L D Sbjct: 256 SVVLGTVESLKPYGAFIDI------------------------VLQPGDTLKVMILSHDR 291 Query: 425 ERERISLGVKQLAEDPFNNWVAL 447 ER R+SL K+L P + Sbjct: 292 ERGRVSLSTKKLEPTPGDMIRNP 314 Score = 44.2 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 15/103 (14%), Positives = 33/103 (32%), Gaps = 1/103 (0%) Query: 449 KKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLV-LSVGDEVEAKFTG 507 G+++ G V + GA V++ +L EA V + G E Sbjct: 88 DIGSLIKGTVFMTTSNGAYVDIQSKSTAFLPLDEACLLDVNHIEEAGIRAGLVEEFMIID 147 Query: 508 VDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEA 550 + + + LS++A + + + ++ Sbjct: 148 ENPGDETLILSLQAIQQDLAWERCRQLQAEDVVVTGKVIGGNK 190 >UniRef50_A9WG06 RNA binding S1 domain protein n=3 Tax=Chloroflexus RepID=A9WG06_CHLAA Length = 554 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 56/170 (32%), Positives = 99/170 (58%), Gaps = 2/170 (1%) Query: 177 ENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVN 236 E +R Q L L G V G V + YGA ++LGG++G +H+ ++ W+ + ++ Sbjct: 372 ERIRQRRQRLAGLTIGQIVNGSVLRVLRYGAVIELGGIEGFVHVGEIDWRWIGDARHALH 431 Query: 237 VGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI 296 G EI + D +R R +L ++++ DPW+A+A++ G ++ G V +TD+G F+E+ Sbjct: 432 PGQEIQAVITGIDEQRLRANLSMRRVHPDPWLAVAQQLNAGMQVQGTVAGITDFGIFIEL 491 Query: 297 EEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGL 346 GV+GL H+S++ + + + ++G V+ +L ID ERRRI+L L Sbjct: 492 LPGVQGLAHISQIPPDQQPLK--QAFSLGRRVQTTILSIDHERRRIALSL 539 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 49/177 (27%), Positives = 79/177 (44%), Gaps = 4/177 (2%) Query: 344 LGLKQCKA-NPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAG 402 L + +Q G V G + + +G I L GGI+G VH+ +I W G Sbjct: 366 LSETYNERIRQRRQRLAGLTIGQIVNGSVLRVLRYGAVIEL-GGIEGFVHVGEIDWRWIG 424 Query: 403 EEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVD 462 +A G EI AV+ +D +R R +L ++++ DP+ G V G V + Sbjct: 425 -DARHALHPGQEIQAVITGIDEQRLRANLSMRRVHPDPWLAVAQQLNAGMQVQGTVAGIT 483 Query: 463 AKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSV 519 G +EL GV+G S+ D+ + S+G V+ +D + R I+LS+ Sbjct: 484 DFGIFIELLPGVQGLAHISQIPPDQ-QPLKQAFSLGRRVQTTILSIDHERRRIALSL 539 Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats. Identities = 52/160 (32%), Positives = 85/160 (53%), Gaps = 4/160 (2%) Query: 274 YPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVL 333 G + G V + YG +E+ G+EG VHV E+DW ++ G ++ ++ Sbjct: 384 LTIGQIVNGSVLRVLRYGAVIELG-GIEGFVHVGEIDWRW-IGDARHALHPGQEIQAVIT 441 Query: 334 DIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHL 393 IDE+R R +L +++ +PW A+ N G +V+G + ITDFGIFI L G+ GL H+ Sbjct: 442 GIDEQRLRANLSMRRVHPDPWLAVAQQLNAGMQVQGTVAGITDFGIFIELLPGVQGLAHI 501 Query: 394 SDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGV 433 S I + + + + G + +L +D ER RI+L + Sbjct: 502 SQIPPD--QQPLKQAFSLGRRVQTTILSIDHERRRIALSL 539 Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 48/180 (26%), Positives = 84/180 (46%), Gaps = 8/180 (4%) Query: 83 LLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVR 142 +LS +R + V G + ++ G +EL GI F+ +D R + Sbjct: 365 VLSETYNERIRQRRQRLAGLTIGQIVNGSVLRVLRYGAVIELGGIEGFVHVGEIDWRWIG 424 Query: 143 DTLH--LEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVK 200 D H G+E++ + +D++R +S R V A + L GM+V+G V Sbjct: 425 DARHALHPGQEIQAVITGIDEQRLRANLSMRRVHPDPWLAVA----QQLNAGMQVQGTVA 480 Query: 201 NLTDYGAFVD-LGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGL 259 +TD+G F++ L GV GL HI+ + + + + ++G + +L D ER R++L L Sbjct: 481 GITDFGIFIELLPGVQGLAHISQIPPDQ-QPLKQAFSLGRRVQTTILSIDHERRRIALSL 539 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 1/102 (0%) Query: 448 NKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTG 507 G IV G V V GA +EL G+EG++ E + DA L G E++A TG Sbjct: 384 LTIGQIVNGSVLRVLRYGAVIELG-GIEGFVHVGEIDWRWIGDARHALHPGQEIQAVITG 442 Query: 508 VDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAE 549 +D + +LS+R +N + + + Sbjct: 443 IDEQRLRANLSMRRVHPDPWLAVAQQLNAGMQVQGTVAGITD 484 Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 23/154 (14%), Positives = 54/154 (35%), Gaps = 7/154 (4%) Query: 18 TRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA---QGELEIQVGDEVDVALDA 74 G IV G V+ + + +++ G E + + + G E+ + Sbjct: 384 LTIGQIVNGSVLRVLRYGAVIELGG-IEGFVHVGEIDWRWIGDARHALHPGQEIQAVITG 442 Query: 75 VEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVE-LNGIRAFLPG 133 +++ LS + W+ + + V G + G G +E L G++ Sbjct: 443 IDEQRLRANLSMRRVHPDP-WLAVAQQLNAGMQVQGTVAGITDFGIFIELLPGVQGLAHI 501 Query: 134 SLVDVRPVRDTLHL-EGKELEFKVIKLDQKRNNV 166 S + G+ ++ ++ +D +R + Sbjct: 502 SQIPPDQQPLKQAFSLGRRVQTTILSIDHERRRI 535 Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 11/80 (13%), Positives = 25/80 (31%), Gaps = 2/80 (2%) Query: 16 IETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQG--ELEIQVGDEVDVALD 73 + G V+G V I + ++ + Q Q + +G V + Sbjct: 467 QQLNAGMQVQGTVAGITDFGIFIELLPGVQGLAHISQIPPDQQPLKQAFSLGRRVQTTIL 526 Query: 74 AVEDGFGETLLSREKAKRHE 93 +++ LS + + Sbjct: 527 SIDHERRRIALSLYTKLQQK 546 >UniRef50_A7M5P8 Putative uncharacterized protein n=1 Tax=Bacteroides ovatus ATCC 8483 RepID=A7M5P8_BACOV Length = 1862 Score = 165 bits (417), Expect = 5e-39, Method: Composition-based stats. Identities = 74/362 (20%), Positives = 152/362 (41%), Gaps = 28/362 (7%) Query: 185 LLENLQEGMEVKGIVKNLTDY-GAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEIT 242 N G ++ + ++ GAF + GVDGL+ + D++W ++ GD + Sbjct: 3 TYNNPSVGDIIRVKITSIKPDLGAFAKMPNGVDGLIRLHDISWSNQSVTLSSLSEGDVLD 62 Query: 243 VKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEG 302 VKV+K + +++L K L +P + +GT + ++ +G V + + Sbjct: 63 VKVIK-ELPDGKLNLSRKNLLPNP-----RTVEKGTIYKVIIKSVESFGLIVNLGDST-A 115 Query: 303 LVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLD--IDEERRR--ISLGLKQCKANPWQQFA 358 LVHVSE+ P+ G+ + +V+D D E+ R IS+ + + + Sbjct: 116 LVHVSEL--------PTIEYKEGEEITCVVIDNNYDPEKHRNKISMSVLALHDYFAKVHS 167 Query: 359 ETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAV 418 E +G IK+ I DG I +V L E + +E+ V Sbjct: 168 ENERVKCLFKGIIKNENSTSALIEADGLIKVIVPLKRFVEPYKTRLLNNEIETDEELEFV 227 Query: 419 VLQVDAERERISLGVKQLAEDPFNNW----VALNKKGAIVTGKVTAVDAKGATVELAD-G 473 ++ + + + + L ++ + + + KG I+ V ++ K AT+++ + G Sbjct: 228 FIKYNEKLKDVVLDMRPIEAEEKKARVDWLRSQLNKGDIIDAIVKNINNKFATIDIGNTG 287 Query: 474 VEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIAT 533 + G + E S ++V A+ + G+ V + G N + S + E ++++ Sbjct: 288 ILGSIYRDELSPNKVIRASDEVFPGEHVRVAYMG--EDNGQLIFSRKFFVEDKYEESLYE 345 Query: 534 VN 535 ++ Sbjct: 346 LS 347 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 57/303 (18%), Positives = 117/303 (38%), Gaps = 26/303 (8%) Query: 14 KEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALD 73 G+I + ++ +++ ++V+ G S + + + +E + G+E+ + Sbjct: 84 NPRTVEKGTIYKVIIKSVESFGLIVNLGD-STALVHVSEL----PTIEYKEGEEITCVVI 138 Query: 74 A--VEDGFGETLLSREKAKRHEAWITLEKAYED-AETVTGVINGKVKGGFTVELNG-IRA 129 + +S H+ + + E G+I + +E +G I+ Sbjct: 139 DNNYDPEKHRNKISMSVLALHDYFAKVHSENERVKCLFKGIIKNENSTSALIEADGLIKV 198 Query: 130 FLP-GSLVDVRPVRDTLHLE--GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLL 186 +P V+ R + +ELEF IK ++K +VV+ R + E A D L Sbjct: 199 IVPLKRFVEPYKTRLLNNEIETDEELEFVFIKYNEKLKDVVLDMRPIEAEEKKARVDWLR 258 Query: 187 ENLQEGMEVKGIVKNLTDYGAFVDLG--GVDGLLHITDMAWKRVKHPSEIVNVGDEITVK 244 L +G + IVKN+ + A +D+G G+ G ++ +++ +V S+ V G+ + V Sbjct: 259 SQLNKGDIIDAIVKNINNKFATIDIGNTGILGSIYRDELSPNKVIRASDEVFPGEHVRVA 318 Query: 245 VLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLT----------GRVTNLTDYGCFV 294 + D ++ K ED + L G+V + F Sbjct: 319 YMGED--NGQLIFSRKFFVEDKYEESLYELSLTDLLATMGLTTNRFIGKVIEINSKYFFT 376 Query: 295 EIE 297 + Sbjct: 377 NLM 379 Score = 79.2 bits (194), Expect = 4e-13, Method: Composition-based stats. Identities = 54/382 (14%), Positives = 114/382 (29%), Gaps = 66/382 (17%) Query: 60 LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAY----------------- 102 VGD + V + +++ G + + Sbjct: 5 NNPSVGDIIRVKITSIKPDLGAFAKMPNGVDGLIRLHDISWSNQSVTLSSLSEGDVLDVK 64 Query: 103 ------------------------EDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDV 138 E +I G V L A + S + Sbjct: 65 VIKELPDGKLNLSRKNLLPNPRTVEKGTIYKVIIKSVESFGLIVNLGDSTALVHVSELPT 124 Query: 139 RPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGI 198 + EG+E+ VI + + + + EN + KGI Sbjct: 125 -----IEYKEGEEITCVVIDNNYDPEKHRNKISMSVLALHDYFAKVHSENERVKCLFKGI 179 Query: 199 VKNLTDYGAFVDLGG-VDGLLHITDMAWKRVKH-PSEIVNVGDEITVKVLKFDRERTRVS 256 +KN A ++ G + ++ + + + +E+ +K++ + V Sbjct: 180 IKNENSTSALIEADGLIKVIVPLKRFVEPYKTRLLNNEIETDEELEFVFIKYNEKLKDVV 239 Query: 257 LGLKQLGEDPW----VAIAKRYPEGTKLTGRVTNLTDYGCFVEIEE-GVEGLVHVSEMDW 311 L ++ + + + + +G + V N+ + ++I G+ G ++ E+ Sbjct: 240 LDMRPIEAEEKKARVDWLRSQLNKGDIIDAIVKNINNKFATIDIGNTGILGSIYRDELS- 298 Query: 312 TNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGD------ 365 NK I S V G+ V V + E+ ++ K + +++ + D Sbjct: 299 PNKVIRASDEVFPGEHVRVAYMG--EDNGQLIFSRKFFVEDKYEESLYELSLTDLLATMG 356 Query: 366 ----RVEGKIKSITDFGIFIGL 383 R GK+ I F L Sbjct: 357 LTTNRFIGKVIEINSKYFFTNL 378 Score = 61.9 bits (149), Expect = 6e-08, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 35/87 (40%), Gaps = 2/87 (2%) Query: 442 NNWVALNKKGAIVTGKVTAVDAK-GATVELADGVEGYLRASEASRDRVEDATLVLSVGDE 500 G I+ K+T++ GA ++ +GV+G +R + S LS GD Sbjct: 1 MTTYNNPSVGDIIRVKITSIKPDLGAFAKMPNGVDGLIRLHDISWSNQSVTLSSLSEGDV 60 Query: 501 VEAKFTGVDRKNRAISLSVRAKDEADE 527 ++ K + + ++LS + Sbjct: 61 LDVKVIK-ELPDGKLNLSRKNLLPNPR 86 >UniRef50_C6LB27 Putative S1 RNA binding domain protein n=2 Tax=Clostridiales RepID=C6LB27_9FIRM Length = 354 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 77/279 (27%), Positives = 141/279 (50%), Gaps = 8/279 (2%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNA---QG 58 + SLK + G ++ G V+ + V +D +E I E F + Sbjct: 60 MADYEAELNASLK--QIHEGDVLTGTVIGVSDTEVTLDLKYYTEGVIRVEDFTDDPNFNV 117 Query: 59 ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKG 118 + E+ +GDE+ + + G G+ +LSR++A AW L+ E + + G VK Sbjct: 118 KEEVHIGDEISATVVRRDGGQGQIMLSRKEANDVLAWDRLKTLMEKQTIIKTKVAGVVKA 177 Query: 119 GFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESEN 178 G V + GIR F+P S + + V + GKE+E +VI ++++ +++S R ++ Sbjct: 178 GVVVYVEGIRGFVPASKLSLNYVENLEEWLGKEVELRVIDVNEEDKKLILSAREILRERE 237 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNV 237 + E+ + N++ G+ +G V++L YGAF++LG G+ GL+H++ ++ KR+K PS ++ V Sbjct: 238 AEEKKARISNVEVGLVTEGTVESLQPYGAFINLGNGLSGLVHVSQISEKRIKSPSAVLKV 297 Query: 238 GDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPE 276 VKV + ++SL +K L + I + E Sbjct: 298 --GDKVKVKVIAVKDGKLSLSMKALQDVAAEEIQEETIE 334 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 57/288 (19%), Positives = 119/288 (41%), Gaps = 10/288 (3%) Query: 272 KRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVM 331 K+ EG LTG V ++D ++++ EG++ V + N + + V++GD + Sbjct: 72 KQIHEGDVLTGTVIGVSDTEVTLDLKYYTEGVIRVEDFTDD-PNFNVKEEVHIGDEISAT 130 Query: 332 VLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLV 391 V+ D + +I L K+ +T + + + + GI G V Sbjct: 131 VVRRDGGQGQIMLSRKEANDVLAWDRLKTLMEKQTIIKTKVAGVVKAGVVVYVEGIRGFV 190 Query: 392 HLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLG----VKQLAEDPFNNWVAL 447 S +S N E G E+ V+ V+ E +++ L +++ + ++ Sbjct: 191 PASKLSLNYV-ENLEEWL--GKEVELRVIDVNEEDKKLILSAREILREREAEEKKARISN 247 Query: 448 NKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTG 507 + G + G V ++ GA + L +G+ G + S+ S R++ + VL V + K Sbjct: 248 VEVGLVTEGTVESLQPYGAFINLGNGLSGLVHVSQISEKRIKSPSAVLKV--GDKVKVKV 305 Query: 508 VDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAAK 555 + K+ +SLS++A + ++ + + + + F K Sbjct: 306 IAVKDGKLSLSMKALQDVAAEEIQEETIELPKSEDVSTNLGSLFAKLK 353 Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 62/274 (22%), Positives = 114/274 (41%), Gaps = 11/274 (4%) Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDYGAFVDL-GGVDGLLHITDMAWKRVKHPSEIVNV 237 AE + L+ + EG + G V ++D +DL +G++ + D + E V++ Sbjct: 64 EAELNASLKQIHEGDVLTGTVIGVSDTEVTLDLKYYTEGVIRVEDFTDDPNFNVKEEVHI 123 Query: 238 GDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIE 297 GDEI+ V++ D + ++ L K+ + K E + V Sbjct: 124 GDEISATVVRRDGGQGQIMLSRKEANDVLAWDRLKTLMEKQTIIKTKVAGVVKAGVVVYV 183 Query: 298 EGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLG----LKQCKANP 353 EG+ G V S++ + + + G VE+ V+D++EE +++ L L++ +A Sbjct: 184 EGIRGFVPASKLSLNY-VENLEEWL--GKEVELRVIDVNEEDKKLILSAREILREREAEE 240 Query: 354 WQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGD 413 + G EG ++S+ +G FI L G+ GLVH+S IS + Sbjct: 241 KKARISNVEVGLVTEGTVESLQPYGAFINLGNGLSGLVHVSQISEKRIKSPSAVLKVGDK 300 Query: 414 EIAAVVLQVDAERERISLGVKQLAEDPFNNWVAL 447 V+ D ++SL +K L + Sbjct: 301 VKVKVIAVKD---GKLSLSMKALQDVAAEEIQEE 331 Score = 84.2 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 55/271 (20%), Positives = 108/271 (39%), Gaps = 15/271 (5%) Query: 88 KAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGI-RAFLPGSLVDVRPVRDTLH 146 A K + + +TG + G T++L + P + Sbjct: 60 MADYEAELNASLKQIHEGDVLTGTVIGVSDTEVTLDLKYYTEGVIRVEDFTDDPNFNVKE 119 Query: 147 LE--GKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTD 204 G E+ V++ D + +++SR+ + L+E +K V + Sbjct: 120 EVHIGDEISATVVRRDGGQGQIMLSRKEANDVLAWDRLKTLMEKQ---TIIKTKVAGVVK 176 Query: 205 YGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLG----LK 260 G V + G+ G + + ++ V++ E + G E+ ++V+ + E ++ L L+ Sbjct: 177 AGVVVYVEGIRGFVPASKLSLNYVENLEEWL--GKEVELRVIDVNEEDKKLILSAREILR 234 Query: 261 QLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSK 320 + + A G G V +L YG F+ + G+ GLVHVS++ + PS Sbjct: 235 EREAEEKKARISNVEVGLVTEGTVESLQPYGAFINLGNGLSGLVHVSQIS-EKRIKSPSA 293 Query: 321 VVNVGDVVEVMVLDIDEERRRISLGLKQCKA 351 V+ V +V V I + ++SL +K + Sbjct: 294 VLKV--GDKVKVKVIAVKDGKLSLSMKALQD 322 Score = 50.7 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 25/157 (15%), Positives = 57/157 (36%), Gaps = 5/157 (3%) Query: 43 KSESAIPAEQFKNAQGE-LEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKA 101 +PA + E LE +G EV++ + V + + +LS + R + Sbjct: 185 GIRGFVPASKLSLNYVENLEEWLGKEVELRVIDVNEEDKKLILSAREILREREAEEKKAR 244 Query: 102 Y---EDAETVTGVINGKVKGGFTVEL-NGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVI 157 E G + G + L NG+ + S + + ++ + + KV Sbjct: 245 ISNVEVGLVTEGTVESLQPYGAFINLGNGLSGLVHVSQISEKRIKSPSAVLKVGDKVKVK 304 Query: 158 KLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGME 194 + K + +S +A+ + +++ +E + Sbjct: 305 VIAVKDGKLSLSMKALQDVAAEEIQEETIELPKSEDV 341 >UniRef50_Q9VC94 CG5728 n=7 Tax=Sophophora RepID=Q9VC94_DROME Length = 1430 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 75/553 (13%), Positives = 164/553 (29%), Gaps = 59/553 (10%) Query: 6 AQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKN---------- 55 E+L + +V GVV + + + + + + Sbjct: 59 EAFSAETLNMDTLQEDMLVMGVVKELTATALQIALPGRMFARTLVADISDAYTRVAKAAM 118 Query: 56 -------AQGELEIQVGDEVDVALDAVED-GFGETLLSREKAKRHEAWITLEKAYEDAET 107 Q+G V E G L K+ + Sbjct: 119 SGDTSEYHDLTELFQLGRIVYGKAIKTEKLDTGRVSLLLSLKPADVHGNLHHKSIKKGFI 178 Query: 108 VTGVINGKVKGGFTVE--LNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNN 165 +G + ++ G+ +E + G++AF+P +P + + L+ K + D ++ Sbjct: 179 FSGAVAEALEHGYVIESGVQGLQAFVPCE----KPAQKLHVGQLAFLKVKTVHHDTHQST 234 Query: 166 VVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAW 225 + + ++ + L+ + G VK V G + ++ + Sbjct: 235 CTCVQVEQDQLRIKSQNETNLDYILPGSIVKFKVAKHLKDGLKGSIMNESFSAYVNEHHL 294 Query: 226 KRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGL---------KQLGEDPWVAIAKRYPE 276 + + ++ +VL V L L +D + Sbjct: 295 ANALDTLDAYELNEDYNARVLYVMPLTKLVYLTLNLDIKTGAAVAKDQDEEEQEVEPIKV 354 Query: 277 GTKLT-GRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVV--NVG--DVVEVM 331 G+ + +V L G + + + ++G++ + K + V G +V Sbjct: 355 GSVVEKAKVLRLGSGGVVLLLNKKLKGIISYGSIRGNFKGNYDKDEVLSKYGRKTKHKVR 414 Query: 332 VLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEG--KIKSITDFGIFIGLDGGIDG 389 +L D N E N GD V K G + + G ++G Sbjct: 415 ILGYDVIESLYYCSDDPNVVNEKLFCLEDINAGDLVTAKIFKKDDKIKGWSVRI-GKVNG 473 Query: 390 LVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALN- 448 ++ ++ Y G + VL+V+AER+ + + + Sbjct: 474 ILEQFYLA-------PNVRYDVGQSLKCRVLEVNAERKICYVSNRAEYLGKGIKILTDYA 526 Query: 449 --KKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFT 506 G + G V + V+ +G++G L G + + Sbjct: 527 SAHVGNVYMGTVVRCEDTYVLVKFGNGIKGVLHRQNL------KENSSFFEGQTTKFRIL 580 Query: 507 GVDRKNRAISLSV 519 ++ I+L++ Sbjct: 581 TRNKD--QITLTL 591 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 78/554 (14%), Positives = 169/554 (30%), Gaps = 85/554 (15%) Query: 18 TRPGSIVRGVVVAIDKDVVLVDA-GLKSESAIPAEQFKNA-QGELEIQVGDEVDVALDAV 75 PGSIV+ V KD + + + NA ++ ++ + + V Sbjct: 258 ILPGSIVKFKVAKHLKDGLKGSIMNESFSAYVNEHHLANALDTLDAYELNEDYNARVLYV 317 Query: 76 EDGFGETLLSREKAKRHEA---------WITLEKAYEDAETVTGVINGKVKGGFTVELNG 126 L+ + A +E + + GG + LN Sbjct: 318 MPLTKLVYLTLNLDIKTGAAVAKDQDEEEQEVEPIKVGSVVEKAKVLRLGSGGVVLLLNK 377 Query: 127 -IRAFLPGSLV------DVRPVRDTLHLEGKE-LEFKVIKLDQKRNNVVVSRRAVIESEN 178 ++ + + + K + +++ D + S + +E Sbjct: 378 KLKGIISYGSIRGNFKGNYDKDEVLSKYGRKTKHKVRILGYDVIESLYYCSDDPNVVNEK 437 Query: 179 SAERDQLLENLQEGMEVKGIVKNLTDY--GAFVDLGGVDGLLHITDMAWKRVKHPSEIVN 236 LE++ G V + D G V +G V+G+L + P+ + Sbjct: 438 LFC----LEDINAGDLVTAKIFKKDDKIKGWSVRIGKVNGIL------EQFYLAPNVRYD 487 Query: 237 VGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRY---PEGTKLTGRVTNLTDYGCF 293 VG + +VL+ + ER + + + I Y G G V D Sbjct: 488 VGQSLKCRVLEVNAERKICYVSNRAEYLGKGIKILTDYASAHVGNVYMGTVVRCEDTYVL 547 Query: 294 VEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANP 353 V+ G++G++H + + G + +L +++ +I+L L + K Sbjct: 548 VKFGNGIKGVLHRQNL-------KENSSFFEGQTTKFRILTRNKD--QITLTLPEDK--- 595 Query: 354 WQQFAETHNKGDRVEGKIKSITDFGIFIGL----------------DGGIDGLVHLSDIS 397 G+ +I + D G+ + + GL+ L +S Sbjct: 596 -------FQLGEICPVEITNALDAGLEVKITFAAEDDEEDEDGNPKLEEFVGLIPLRLLS 648 Query: 398 WNVAGEEAVREYKK-GDEIAAVVLQVDAERERISLGVKQLAED--PFNNWVALNKKGAIV 454 ++ A G A + + ++ + + G I+ Sbjct: 649 DHLELLHAQMRVHPAGSYTDAACIMQN------IFSLRDVPYFSGQLTKDWQSVQVGDII 702 Query: 455 TGKVTAVDAKGATVEL-----ADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVD 509 V + V+L + + V++A + L + K + Sbjct: 703 RSYVKHATDQ--VVDLMVCVRNYNKPVKVHVKMLRLNAVKNAPVELVPEQLLWVKVLSKE 760 Query: 510 RKNRAISLSVRAKD 523 + + +++S + D Sbjct: 761 VETKTLTVSAKLTD 774 Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 79/529 (14%), Positives = 165/529 (31%), Gaps = 84/529 (15%) Query: 18 TRPGSIV-RGVVVAIDKDVVLVDAGLKSESAIPAEQFK------NAQGELEIQVG--DEV 68 + GS+V + V+ + V++ K + I + + E+ + G + Sbjct: 352 IKVGSVVEKAKVLRLGSGGVVLLLNKKLKGIISYGSIRGNFKGNYDKDEVLSKYGRKTKH 411 Query: 69 DVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETV-TGVINGKVKGGFTVELNGI 127 V + + S + +E LE G++V + + Sbjct: 412 KVRILGYDVIESLYYCSDDPNVVNEKLFCLEDINAGDLVTAKIFKKDDKIKGWSVRIGKV 471 Query: 128 RAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLE 187 L + + + G+ L+ +V++++ +R VS RA + Sbjct: 472 NGILEQFYLAP----NVRYDVGQSLKCRVLEVNAERKICYVSNRAEYLGKGIKIL-TDYA 526 Query: 188 NLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVL 246 + G G V D V G G+ G+LH ++ + G ++L Sbjct: 527 SAHVGNVYMGTVVRCEDTYVLVKFGNGIKGVLHRQNL------KENSSFFEGQTTKFRIL 580 Query: 247 KFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEI---------- 296 +++ +++L L ++ G +TN D G V+I Sbjct: 581 TRNKD--QITLTL----------PEDKFQLGEICPVEITNALDAGLEVKITFAAEDDEED 628 Query: 297 ---EEGVE---GLVHVSEMDWTNKNIHPSKVVNV-GDVVEVMVLDIDEERRRISLGLKQC 349 +E GL+ + + + +H V+ G + + + SL Sbjct: 629 EDGNPKLEEFVGLIPLRLLSDHLELLHAQMRVHPAGSYTDAACI----MQNIFSLRDVPY 684 Query: 350 KANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDG-----GIDGLVHLSDISWNVAGEE 404 + + ++ GD + +K TD + L VH+ + N Sbjct: 685 FSGQLTKDWQSVQVGDIIRSYVKHATDQ--VVDLMVCVRNYNKPVKVHVKMLRLNAVKNA 742 Query: 405 AVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAK 464 V + VL + E + +++ K + +V G + V Sbjct: 743 PVELV-PEQLLWVKVLSKEVETKTLTVSAKLTDVWSGDLSDTA----KLVEGYLNEVA-- 795 Query: 465 GATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNR 513 ++ G+E SVG+++ F G+D Sbjct: 796 ----QIKAGLE-----------EASAPISKYSVGEKINVVFKGIDATTN 829 Score = 75.8 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 60/419 (14%), Positives = 136/419 (32%), Gaps = 48/419 (11%) Query: 155 KVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVD--LG 212 K KLD R ++++S + N + ++++G G V ++G ++ + Sbjct: 144 KTEKLDTGRVSLLLSLKPADVHGNLHHK-----SIKKGFIFSGAVAEALEHGYVIESGVQ 198 Query: 213 GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAK 272 G+ + + P++ ++VG +KV + + + Q+ +D ++ Sbjct: 199 GLQAFVPC--------EKPAQKLHVGQLAFLKVKTVHHDTHQSTCTCVQVEQDQLRIKSQ 250 Query: 273 RYP------EGTKLTGRVTNLTDYGCFVEIEE-GVEGLVHVSEMDWTNKNIHPSKVVNVG 325 G+ + +V G I V+ + + + Sbjct: 251 NETNLDYILPGSIVKFKVAKHLKDGLKGSIMNESFSAYVNEHHLANA---LDTLDAYELN 307 Query: 326 DVVEVMVLDIDEERRRISLGLK---------QCKANPWQQFAETHNKGDRVE-GKIKSIT 375 + VL + + + L L + +Q E G VE K+ + Sbjct: 308 EDYNARVLYVMPLTKLVYLTLNLDIKTGAAVAKDQDEEEQEVEPIKVGSVVEKAKVLRLG 367 Query: 376 DFGIFIGLDGGIDGLVH----LSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISL 431 G+ + L+ + G++ + N +E + +Y + + +L D Sbjct: 368 SGGVVLLLNKKLKGIISYGSIRGNFKGNYDKDEVLSKYGRKTKHKVRILGYDVIESLYYC 427 Query: 432 GVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAK--GATVELADGVEGYLRASEASRDRVE 489 + + G +VT K+ D K G +V + V G L + Sbjct: 428 SDDPNVVNEKLFCLEDINAGDLVTAKIFKKDDKIKGWSVRIG-KVNGILEQFYLA----- 481 Query: 490 DATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMA 548 + VG ++ + V+ + + +S RA+ + N + Sbjct: 482 -PNVRYDVGQSLKCRVLEVNAERKICYVSNRAEYLGKGIKILTDYASAHVGNVYMGTVV 539 Score = 63.1 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 64/518 (12%), Positives = 146/518 (28%), Gaps = 75/518 (14%) Query: 10 EESLKEIETRPGSIVRGVVVAIDKD--VVLVDAGLKSESAIPAEQFKNAQGELEIQVGDE 67 E+ + G +V + D V G K + + + VG Sbjct: 436 EKLFCLEDINAGDLVTAKIFKKDDKIKGWSVRIG-KVNGIL---EQFYLAPNVRYDVGQS 491 Query: 68 VDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDA--ETVTGVINGKVKGGFTVEL- 124 + + V +S + L G + V+ Sbjct: 492 LKCRVLEVNAERKICYVSNRAEYLGKGIKILTDYASAHVGNVYMGTVVRCEDTYVLVKFG 551 Query: 125 NGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQ 184 NGI+ L + ++ EG+ +F+++ ++ + + + + Sbjct: 552 NGIKGVLHRQNLK----ENSSFFEGQTTKFRILTRNKDQITLTLPEDK--FQLGEICPVE 605 Query: 185 LLENLQEGMEVKGIVKNLTDYGAFV---DLGGVDGLLHITDMAW--KRVKHPSEIVNVGD 239 + L G+EVK D L GL+ + ++ + + + G Sbjct: 606 ITNALDAGLEVKITFAAEDDEEDEDGNPKLEEFVGLIPLRLLSDHLELLHAQMRVHPAGS 665 Query: 240 EITVKVLKFDRERTRVSLGLKQLGEDPWVAI--AKRYPEGTKLTGRVTNLTDYGCFVEIE 297 + + L+ + + G + V + TD V++ Sbjct: 666 YTDAACIMQN------IFSLRDVPYFSGQLTKDWQSVQVGDIIRSYVKHATDQ--VVDLM 717 Query: 298 E-----GVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKAN 352 VHV + P ++V ++ V VL + E + +++ K Sbjct: 718 VCVRNYNKPVKVHVKMLRLNAVKNAPVELVPE-QLLWVKVLSKEVETKTLTVSAKLTD-- 774 Query: 353 PWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKG 412 + + VEG + + + G++ + +Y G Sbjct: 775 --VWSGDLSDTAKLVEGYLNEVAQ------IKAGLE------------EASAPISKYSVG 814 Query: 413 DEIAAVVLQVD----------AERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVD 462 ++I V +D ++S L + G+ + ++ Sbjct: 815 EKINVVFKGIDATTNDWVYTVEGNGKVS----ALLLSSLVGTAKAPEMGSKHEAVILWIE 870 Query: 463 AKGATVELADGVEGYLRAS---EASRDRVEDATLVLSV 497 + +++ S E S + + A + V Sbjct: 871 YSSDVLLISNKKLDIAHISPSGELSTNLIGKAGMKAKV 908 >UniRef50_C9NIQ1 RNA binding S1 domain protein n=2 Tax=Streptomyces RepID=C9NIQ1_9ACTO Length = 503 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 66/190 (34%), Positives = 99/190 (52%), Gaps = 7/190 (3%) Query: 167 VVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGA-FVDLGGVDGLLHITDMAW 225 VV R E + L+ LQ G V G V +G FVD+ G +G ++I +++W Sbjct: 316 VVRARWRTEPTPEDRKWAFLKTLQPGQVVTGTVTETASFGVTFVDVDGYEGFINIPELSW 375 Query: 226 KRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVT 285 + V HP+++V+VG I VL D R +++L L+ + +DP + + GT L GRVT Sbjct: 376 RSVAHPADVVSVGQRIHAGVLGVDGVRAQMALSLRAVQDDPMQQLTGQ--VGTTLPGRVT 433 Query: 286 NLTDYGCFV---EIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRI 342 + +G FV EIE G GLVH SE+ + P + VG + V +LD+D RRI Sbjct: 434 KIVPFGVFVRIEEIENGFAGLVHNSEL-LGRQEKEPQGGIEVGSTLRVKILDVDLGSRRI 492 Query: 343 SLGLKQCKAN 352 +L +Q Sbjct: 493 TLSQRQADPE 502 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 58/268 (21%), Positives = 103/268 (38%), Gaps = 35/268 (13%) Query: 282 GRVTNLTDYGCFVE-IEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVE----VMVLDID 336 G V VE + + +G +H + + V + ++ +L ID Sbjct: 246 GAVLGSLPREGLVEGVWQDTDGRLH-------SAVADEADYVELTTRMKGAAAAALLSID 298 Query: 337 EERR---------------RISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGI-F 380 + R R + + F +T G V G + FG+ F Sbjct: 299 ADERVPLFTAVLPDTDGVVRARWRTEPTPEDRKWAFLKTLQPGQVVTGTVTETASFGVTF 358 Query: 381 IGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDP 440 + +D G +G +++ ++SW G I A VL VD R +++L ++ + +DP Sbjct: 359 VDVD-GYEGFINIPELSWRSVA-HPADVVSVGQRIHAGVLGVDGVRAQMALSLRAVQDDP 416 Query: 441 FNNWVALNKKGAIVTGKVTAVDAKGATV---ELADGVEGYLRASEASRDRVEDATLVLSV 497 + G + G+VT + G V E+ +G G + SE + ++ + V Sbjct: 417 MQQLTG--QVGTTLPGRVTKIVPFGVFVRIEEIENGFAGLVHNSELLGRQEKEPQGGIEV 474 Query: 498 GDEVEAKFTGVDRKNRAISLSVRAKDEA 525 G + K VD +R I+LS R D Sbjct: 475 GSTLRVKILDVDLGSRRITLSQRQADPE 502 Score = 141 bits (355), Expect = 8e-32, Method: Composition-based stats. Identities = 53/180 (29%), Positives = 88/180 (48%), Gaps = 9/180 (5%) Query: 264 EDPWVAIAKRYPEGTKLTGRVTNLTDYGC-FVEIEEGVEGLVHVSEMDWTNKNIHPSKVV 322 ED A K G +TG VT +G FV++ +G EG +++ E+ W HP+ VV Sbjct: 328 EDRKWAFLKTLQPGQVVTGTVTETASFGVTFVDV-DGYEGFINIPELSW-RSVAHPADVV 385 Query: 323 NVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFI- 381 +VG + VL +D R +++L L+ + +P QQ G + G++ I FG+F+ Sbjct: 386 SVGQRIHAGVLGVDGVRAQMALSLRAVQDDPMQQLTG--QVGTTLPGRVTKIVPFGVFVR 443 Query: 382 --GLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAED 439 ++ G GLVH S++ +E + G + +L VD RI+L +Q + Sbjct: 444 IEEIENGFAGLVHNSEL-LGRQEKEPQGGIEVGSTLRVKILDVDLGSRRITLSQRQADPE 502 Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 54/171 (31%), Gaps = 14/171 (8%) Query: 16 IETRPGSIVRGVVVAIDKDVV-LVDAGLKSESAIPAEQFKN---AQGELEIQVGDEVDVA 71 +PG +V G V V VD E I + A + VG + Sbjct: 336 KTLQPGQVVTGTVTETASFGVTFVDVDG-YEGFINIPELSWRSVAHPADVVSVGQRIHAG 394 Query: 72 LDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVEL----NGI 127 + V+ + LS + + T+ G + V G V + NG Sbjct: 395 VLGVDGVRAQMALSLRAVQDDPMQQLTG---QVGTTLPGRVTKIVPFGVFVRIEEIENGF 451 Query: 128 RAFLPGSLVDVRPVRDTLH--LEGKELEFKVIKLDQKRNNVVVSRRAVIES 176 + S + R ++ G L K++ +D + +S+R Sbjct: 452 AGLVHNSELLGRQEKEPQGGIEVGSTLRVKILDVDLGSRRITLSQRQADPE 502 Score = 79.2 bits (194), Expect = 4e-13, Method: Composition-based stats. Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 2/90 (2%) Query: 438 EDPFNNWVALNKKGAIVTGKVTAVDAKGA-TVELADGVEGYLRASEASRDRVEDATLVLS 496 ED ++ + G +VTG VT + G V++ DG EG++ E S V V+S Sbjct: 328 EDRKWAFLKTLQPGQVVTGTVTETASFGVTFVDV-DGYEGFINIPELSWRSVAHPADVVS 386 Query: 497 VGDEVEAKFTGVDRKNRAISLSVRAKDEAD 526 VG + A GVD ++LS+RA + Sbjct: 387 VGQRIHAGVLGVDGVRAQMALSLRAVQDDP 416 Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 38/98 (38%), Gaps = 6/98 (6%) Query: 1 MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLV---DAGLKSESAIPAEQFKNAQ 57 M S + ++ ++++ + G+ + G V I V V + + + Q Sbjct: 405 MALSLRAVQDDPMQQLTGQVGTTLPGRVTKIVPFGVFVRIEEIENGFAGLVHNSELLGRQ 464 Query: 58 GELE---IQVGDEVDVALDAVEDGFGETLLSREKAKRH 92 + I+VG + V + V+ G LS+ +A Sbjct: 465 EKEPQGGIEVGSTLRVKILDVDLGSRRITLSQRQADPE 502 >UniRef50_Q0D7X0 Os07g0203300 protein (Fragment) n=7 Tax=Magnoliophyta RepID=Q0D7X0_ORYSJ Length = 689 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 79/398 (19%), Positives = 157/398 (39%), Gaps = 42/398 (10%) Query: 177 ENSAERDQLLENLQEGMEVKGIVKNLTD--YGAFVDLG-GVDGLLHITDMAWKRVKHPSE 233 E +E+ ++G + G ++ + G + +G + G +H T++ V+ P Sbjct: 25 ETQKPLSATVEHTKQGDIIGGRIQKILPGVGGLVIQIGPHLHGRVHYTEIVDSWVQEPIS 84 Query: 234 IVNVGDEITVKVLKFDRERT---RVSLGL-----------KQLGEDPWVAIAKRYP---- 275 + G + KVL R RV L L ++L +D + ++ Sbjct: 85 GFHEGQFVKCKVLDVSRSSEGSVRVDLSLRSSMCANSNQSRRLFDDSRIRTSRFEKINDL 144 Query: 276 -EGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLD 334 GT++ G V ++ GCF+ + +E + +S + +P VG +V VL Sbjct: 145 CPGTEVKGYVKSVNSKGCFIMVSRTIEARIILSNLSDEY-VENPQNDFPVGLLVHGRVLS 203 Query: 335 IDEERRRISLGLKQCK----ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDG-GIDG 389 + + ++ + L++ + GD + G++K + FG+F+ + G + Sbjct: 204 SEPQSGKVEVSLRKNTGSKSQKSDDISYSDLHVGDIIAGQVKRVESFGLFVTIQGSELVA 263 Query: 390 LVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNK 449 L H+S++S + +K GD++ A +L++D ER R+S+G+K+ P + + Sbjct: 264 LCHVSELSDEPVL-DIHSCHKAGDKVKAKILKIDEERHRVSIGMKKSYIGPDSTGDTSDD 322 Query: 450 KGAIV------TGKVTAVDAKGATVELADGVEGYLRASEAS-RDRVEDATLVLSVGDEVE 502 + + V D A V + + S + + G E+ Sbjct: 323 EDDEIVPEEISRNPVMGRDRNHALVLPKPESRASVLPLQVSLDESEGSDQENDNKGQEI- 381 Query: 503 AKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDA 540 A T VD K S + E K ++ E+ Sbjct: 382 ANGTEVDDKK-----SNKRLKEKARKQRELEISALEER 414 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 59/311 (18%), Positives = 117/311 (37%), Gaps = 30/311 (9%) Query: 263 GEDPWVAIAKRYPEGTKLTGRVTNLTDY--GCFVEIEEGVEGLVHVSEMDWTNKNIHPSK 320 + P A + +G + GR+ + G ++I + G VH +E+ + P Sbjct: 26 TQKPLSATVEHTKQGDIIGGRIQKILPGVGGLVIQIGPHLHGRVHYTEIVDSW-VQEPIS 84 Query: 321 VVNVGDVVEVMVLDIDEERR---RISLGLKQCKANPWQQFAETHN--------------- 362 + G V+ VLD+ R+ L L+ Q + Sbjct: 85 GFHEGQFVKCKVLDVSRSSEGSVRVDLSLRSSMCANSNQSRRLFDDSRIRTSRFEKINDL 144 Query: 363 -KGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQ 421 G V+G +KS+ G FI + I+ + LS++S E ++ G + VL Sbjct: 145 CPGTEVKGYVKSVNSKGCFIMVSRTIEARIILSNLSDEYV-ENPQNDFPVGLLVHGRVLS 203 Query: 422 VDAERERISLGVKQLA----EDPFNNWVALNKKGAIVTGKVTAVDAKGATVELAD-GVEG 476 + + ++ + +++ + + + G I+ G+V V++ G V + + Sbjct: 204 SEPQSGKVEVSLRKNTGSKSQKSDDISYSDLHVGDIIAGQVKRVESFGLFVTIQGSELVA 263 Query: 477 YLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNK 536 SE S + V D GD+V+AK +D + +S+ ++ D+ + Sbjct: 264 LCHVSELSDEPVLDIHSCHKAGDKVKAKILKIDEERHRVSIGMKKSYIGP--DSTGDTSD 321 Query: 537 QEDANFSNNAM 547 ED + Sbjct: 322 DEDDEIVPEEI 332 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 59/352 (16%), Positives = 113/352 (32%), Gaps = 36/352 (10%) Query: 12 SLKEIETRPGSIVRGVVVAIDKD--VVLVDAGLKSESAIPAEQFKNAQGELE---IQVGD 66 S T+ G I+ G + I +++ G + + ++ + G Sbjct: 31 SATVEHTKQGDIIGGRIQKILPGVGGLVIQIGPHLHGRVHYTEIVDSWVQEPISGFHEGQ 90 Query: 67 EVDVALDAVE-------------------DGFGETLLSREKAKRHEAWITLEKAYEDAET 107 V + V + L + R + + E Sbjct: 91 FVKCKVLDVSRSSEGSVRVDLSLRSSMCANSNQSRRLFDDSRIRTSRFEKINDLCPGTE- 149 Query: 108 VTGVINGKVKGGFTVELN-GIRAFLPGSLVDVRPVRDTLH--LEGKELEFKVIKLDQKRN 164 V G + G + ++ I A + S + V + + G + +V+ + + Sbjct: 150 VKGYVKSVNSKGCFIMVSRTIEARIILSNLSDEYVENPQNDFPVGLLVHGRVLSSEPQSG 209 Query: 165 NVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVD--GLLHITD 222 V VS R S++ D +L G + G VK + +G FV + G + L H+++ Sbjct: 210 KVEVSLRKNTGSKSQKSDDISYSDLHVGDIIAGQVKRVESFGLFVTIQGSELVALCHVSE 269 Query: 223 MAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDP------WVAIAKRYPE 276 ++ + V GD++ K+LK D ER RVS+G+K+ P Sbjct: 270 LSDEPVLDIHSCHKAGDKVKAKILKIDEERHRVSIGMKKSYIGPDSTGDTSDDEDDEIVP 329 Query: 277 GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVV 328 V V + V ++ + N G + Sbjct: 330 EEISRNPVMGRDRNHALVLPKPESRASVLPLQVSLDESEGSDQENDNKGQEI 381 >UniRef50_Q6B8Z9 30S ribosomal protein S1 n=1 Tax=Gracilaria tenuistipitata var. liui RepID=Q6B8Z9_GRATL Length = 265 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 52/265 (19%), Positives = 117/265 (44%), Gaps = 15/265 (5%) Query: 2 TESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQF----KNAQ 57 + F + + PG I+ G V + LVD G+ +P ++ + Sbjct: 11 EKDFGAILNQY--SYNLHPGDIIAGTVFHKEAKGFLVDVGVNIAGYLPIDEVLLGSGYSN 68 Query: 58 GELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVK 117 +L V + + + A + LLS ++ +AW +++ + + + K Sbjct: 69 DDLMYLVNNTREFFIFAYNKERQQLLLSIKRLDYIKAWKRIKQLETEEIILHVPLINFNK 128 Query: 118 GGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESE 177 GG L G+ +F+P S + + + L K++ +D+K N +++S + + Sbjct: 129 GGILTALEGLHSFIPRSHLILFNA--YESMVRSYLPCKILLVDEKTNKIILSHKLAL--- 183 Query: 178 NSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNV 237 + L+ G V G + YG F+++ G+ LLHI+++ ++ + + + + Sbjct: 184 ----LYLYSDLLRVGRLVYGQIIQFKQYGIFLNIYGIPALLHISEIGYEYIDNIDCVFAI 239 Query: 238 GDEITVKVLKFDRERTRVSLGLKQL 262 G +I VK++ D ++ R+S+ +++ Sbjct: 240 GHKIKVKIIHIDMKQARLSVSRREV 264 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 48/269 (17%), Positives = 104/269 (38%), Gaps = 12/269 (4%) Query: 255 VSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNK 314 + K G + G + G V + G V++ + G + + E+ + Sbjct: 7 IGFSEKDFGAI-LNQYSYNLHPGDIIAGTVFHKEAKGFLVDVGVNIAGYLPIDEVLLGSG 65 Query: 315 NIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRV-EGKIKS 373 + + V + E + ++ER+++ L +K+ + + + + + + Sbjct: 66 YSNDDLMYLVNNTREFFIFAYNKERQQLLLSIKRLDYIKAWKRIKQLETEEIILHVPLIN 125 Query: 374 ITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGV 433 GI L+ G+ + S + A E VR Y + +L VD + +I L Sbjct: 126 FNKGGILTALE-GLHSFIPRSHLILFNAYESMVRSY-----LPCKILLVDEKTNKIILSH 179 Query: 434 KQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATL 493 K + L + G +V G++ G + + G+ L SE + +++ Sbjct: 180 KLAL---LYLYSDLLRVGRLVYGQIIQFKQYGIFLNIY-GIPALLHISEIGYEYIDNIDC 235 Query: 494 VLSVGDEVEAKFTGVDRKNRAISLSVRAK 522 V ++G +++ K +D K +S+S R Sbjct: 236 VFAIGHKIKVKIIHIDMKQARLSVSRREV 264 Score = 50.0 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 41/112 (36%), Gaps = 4/112 (3%) Query: 429 ISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASE--ASRD 486 I K N + G I+ G V +AKG V++ + GYL E Sbjct: 7 IGFSEKDFG-AILNQYSYNLHPGDIIAGTVFHKEAKGFLVDVGVNIAGYLPIDEVLLGSG 65 Query: 487 RVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQE 538 D + L V + E +++ + + LS++ D I + +E Sbjct: 66 YSNDDLMYL-VNNTREFFIFAYNKERQQLLLSIKRLDYIKAWKRIKQLETEE 116 >UniRef50_B2XT45 30S ribosomal protein S1 n=2 Tax=Heterosigma akashiwo RepID=B2XT45_HETA2 Length = 269 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 62/273 (22%), Positives = 122/273 (44%), Gaps = 19/273 (6%) Query: 1 MTESFAQLFEESLKE-------IETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQF 53 M+ +F FE S E + G I+ G V++ +K L+D G K + +P+ + Sbjct: 1 MSINFTSNFENSFFELLFKKYNYQFSKGDIIAGKVISFEKFGTLIDIGAKVLAYLPSSEI 60 Query: 54 KNAQG---ELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTG 110 + Q + + G+ ++ L ++S ++ K W L++ + ++G Sbjct: 61 SSFQAFLTKQLLNRGELLEFVLTDYRPNKKTLIISLKQLKSIITWQRLKELIREDLILSG 120 Query: 111 VINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSR 170 + K G + LNG++ F+ S + R L L K ++L + +N +++S Sbjct: 121 QVKKSTKQGKLIILNGLKGFVLNSHLPKYYRRK--QLTKLHLPLKFLELSEGKNKILLSC 178 Query: 171 RAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKH 230 + + L+ + G + ++ YG FV++ G+ GLLHI++++ +R+ + Sbjct: 179 KLAHFKNQTNF-------LKPQQVIMGCITDIKSYGLFVNIYGLKGLLHISEISSQRIDN 231 Query: 231 PSEIVNVGDEITVKVLKFDRERTRVSLGLKQLG 263 S+ G I V VL + R R+SL K Sbjct: 232 LSKRFQKGQLIQVTVLYINLNRGRISLTAKPFE 264 Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 50/258 (19%), Positives = 109/258 (42%), Gaps = 12/258 (4%) Query: 270 IAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVE 329 ++ +G + G+V + +G ++I V + SE+ + +++N G+++E Sbjct: 21 YNYQFSKGDIIAGKVISFEKFGTLIDIGAKVLAYLPSSEISSFQAFLT-KQLLNRGELLE 79 Query: 330 VMVLDIDEERRRISLGLKQCK-ANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGID 388 ++ D ++ + + LKQ K WQ+ E + + G++K T G I + G+ Sbjct: 80 FVLTDYRPNKKTLIISLKQLKSIITWQRLKELIREDLILSGQVKKSTKQGKLI-ILNGLK 138 Query: 389 GLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALN 448 G V S + ++ + + L++ + +I L K F N Sbjct: 139 GFVLNSHLPKYYRRKQLTKL-----HLPLKFLELSEGKNKILLSCK---LAHFKNQTNFL 190 Query: 449 KKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGV 508 K ++ G +T + + G V + G++G L SE S R+++ + G ++ + Sbjct: 191 KPQQVIMGCITDIKSYGLFVNIY-GLKGLLHISEISSQRIDNLSKRFQKGQLIQVTVLYI 249 Query: 509 DRKNRAISLSVRAKDEAD 526 + ISL+ + + Sbjct: 250 NLNRGRISLTAKPFELQK 267 Score = 134 bits (338), Expect = 7e-30, Method: Composition-based stats. Identities = 55/252 (21%), Positives = 108/252 (42%), Gaps = 13/252 (5%) Query: 188 NLQEGMEVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVL 246 +G + G V + +G +D+G V L ++++ + +++N G+ + + Sbjct: 24 QFSKGDIIAGKVISFEKFGTLIDIGAKVLAYLPSSEISSFQAFLTKQLLNRGELLEFVLT 83 Query: 247 KFDRERTRVSLGLKQL-GEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVH 305 + + + + LKQL W + + E L+G+V T G + I G++G V Sbjct: 84 DYRPNKKTLIISLKQLKSIITWQRLKELIREDLILSGQVKKSTKQGKLI-ILNGLKGFVL 142 Query: 306 VSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGD 365 S + + +K+ + + L++ E + +I L K Sbjct: 143 NSHLPKYYRRKQLTKL-----HLPLKFLELSEGKNKILLSCKLAHFK---NQTNFLKPQQ 194 Query: 366 RVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAE 425 + G I I +G+F+ + G+ GL+H+S+IS + + ++KG I VL ++ Sbjct: 195 VIMGCITDIKSYGLFVNIY-GLKGLLHISEISSQRI-DNLSKRFQKGQLIQVTVLYINLN 252 Query: 426 RERISLGVKQLA 437 R RISL K Sbjct: 253 RGRISLTAKPFE 264 Score = 71.1 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 75/181 (41%), Gaps = 7/181 (3%) Query: 354 WQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGD 413 ++++ +KGD + GK+ S FG I + + + S+IS + + +G+ Sbjct: 18 FKKYNYQFSKGDIIAGKVISFEKFGTLIDIGAKVLAYLPSSEIS-SFQAFLTKQLLNRGE 76 Query: 414 EIAAVVLQVDAERERISLGVKQ-LAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELAD 472 + V+ ++ + + +KQ + + L ++ I++G+V +G + + + Sbjct: 77 LLEFVLTDYRPNKKTLIISLKQLKSIITWQRLKELIREDLILSGQVKKSTKQGKLI-ILN 135 Query: 473 GVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIA 532 G++G++ S + L + KF + I LS + ++ + + Sbjct: 136 GLKGFVLNSHLPKYYRRKQLTKL----HLPLKFLELSEGKNKILLSCKLAHFKNQTNFLK 191 Query: 533 T 533 Sbjct: 192 P 192 Score = 52.3 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 40/92 (43%) Query: 447 LNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFT 506 KG I+ GKV + + G +++ V YL +SE S + +L+ G+ +E T Sbjct: 24 QFSKGDIIAGKVISFEKFGTLIDIGAKVLAYLPSSEISSFQAFLTKQLLNRGELLEFVLT 83 Query: 507 GVDRKNRAISLSVRAKDEADEKDAIATVNKQE 538 + + +S++ + + +++ Sbjct: 84 DYRPNKKTLIISLKQLKSIITWQRLKELIRED 115 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.310 0.144 0.372 Lambda K H 0.267 0.0442 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,137,302,716 Number of Sequences: 3077464 Number of extensions: 129438856 Number of successful extensions: 396588 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 1821 Number of HSP's successfully gapped in prelim test: 1354 Number of HSP's that attempted gapping in prelim test: 348409 Number of HSP's gapped (non-prelim): 16211 length of query: 557 length of database: 1,040,396,356 effective HSP length: 134 effective length of query: 423 effective length of database: 628,016,180 effective search space: 265650844140 effective search space used: 265650844140 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.6 bits) S2: 96 (41.5 bits)